607 4880 111 4 1 chr15 3000000 3000679 -100494295 - MMERVK10C-int LTR ERVK -6057 1524 844 1 607 3560 192 55 43 chr15 3000675 3001598 -100493376 - MMERVK10C-int LTR ERVK -6657 924 1 1 607 1934 174 3 13 chr15 3001598 3001912 -100493062 - RLTR10E LTR ERVK 0 311 1 2 607 286 169 143 22 chr15 3001912 3001924 -100493050 - IAPLTR4_I LTR ERVK -1449 21 6 1 607 468 264 59 44 chr15 3002550 3002685 -100492289 + ID_B1 SINE B4 76 212 -12 3 607 199 72 23 23 chr15 3002955 3002998 -100491976 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 4 607 212 143 0 0 chr15 3003218 3003253 -100491721 + (C)n Simple_repeat Simple_repeat 1 35 0 5 607 225 0 0 0 chr15 3003922 3003947 -100491027 + (T)n Simple_repeat Simple_repeat 1 25 0 6 607 2236 83 33 3 chr15 3004105 3004406 -100490568 - L1_Mus3 LINE L1 -6 6632 6323 7 607 2531 133 48 93 chr15 3004821 3005326 -100489648 - RLTR45 LTR ERVK 0 482 1 8 607 23 0 0 0 chr15 3006410 3006433 -100488541 + AT_rich Low_complexity Low_complexity 1 23 0 9 607 260 268 28 14 chr15 3006902 3006974 -100488000 + ID4 SINE ID 3 75 -8 1 607 583 37 24 0 chr15 3007082 3007164 -100487810 + (TTATA)n Simple_repeat Simple_repeat 4 87 0 1 607 2251 172 36 8 chr15 3007915 3008307 -100486667 - MTC LTR MaLR -10 411 9 1 607 4304 146 22 38 chr15 3008315 3009070 -100485904 + RLTR14-int LTR ERV1 3797 4539 -778 1 607 2886 109 12 0 chr15 3009069 3009472 -100485502 + MurERV4_19-int LTR ERVK 1852 2259 -3521 1 607 308 317 28 42 chr15 3009671 3009885 -100485089 + RMER5 LTR ERV1 273 483 -51 1 607 415 318 40 0 chr15 3009891 3010017 -100484957 + ORR1E LTR MaLR 3 133 -226 1 607 263 140 0 20 chr15 3010027 3010078 -100484896 + GA-rich Low_complexity Low_complexity 6 55 0 1 607 1007 207 5 18 chr15 3010078 3010295 -100484679 + RLTR14-int LTR ERV1 5101 5314 -3 1 607 1936 214 16 3 chr15 3010318 3010693 -100484281 + RLTR14 LTR ERV1 3 382 0 1 607 207 69 0 0 chr15 3010886 3010915 -100484059 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1 607 1121 88 0 0 chr15 3010915 3011052 -100483922 - B1_Mus2 SINE Alu -10 137 1 2 607 2029 205 133 47 chr15 3011071 3011761 -100483213 - L1_Rod LINE L1 -3645 2202 1448 2 607 351 0 0 0 chr15 3011761 3011800 -100483174 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 607 2029 205 133 47 chr15 3011800 3011837 -100483137 - L1_Rod LINE L1 -4400 1447 1412 2 607 1165 92 0 0 chr15 3011879 3012021 -100482953 - B1_Mus1 SINE Alu -6 142 1 2 607 245 210 16 0 chr15 3012026 3012088 -100482886 + ORR1E LTR MaLR 329 391 -28 1 607 1565 256 30 10 chr15 3012892 3013287 -100481687 - Lx5 LINE L1 0 7050 6648 2 607 644 142 38 0 chr15 3013288 3013394 -100481580 + RLTR11A LTR ERVK 3 112 -416 2 607 609 205 6 58 chr15 3013650 3013821 -100481153 + RNLTR23 LTR ERVK 481 642 0 2 607 2259 150 26 10 chr15 3013821 3014236 -100480738 + RLTR11A LTR ERVK 107 528 0 2 607 182 0 107 0 chr15 3014435 3014463 -100480511 + (TCTCCC)n Simple_repeat Simple_repeat 6 36 0 2 607 1185 88 7 0 chr15 3014483 3014630 -100480344 - B1_Mus1 SINE Alu 0 148 1 2 608 645 323 96 9 chr15 3015901 3015969 -100479005 + Lx8 LINE L1 6100 6168 -1305 2 608 509 0 0 16 chr15 3015969 3016031 -100478943 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 3 608 645 323 96 9 chr15 3016031 3016306 -100478668 + Lx8 LINE L1 6169 6472 -1001 2 608 1066 101 0 0 chr15 3016398 3016546 -100478428 + B2_Mm2 SINE B2 1 148 -47 3 608 504 0 0 0 chr15 3016550 3016606 -100478368 + (TAAA)n Simple_repeat Simple_repeat 3 58 0 3 608 656 232 21 14 chr15 3016798 3016942 -100478032 + B1_Mur4 SINE Alu 6 150 0 3 608 237 319 45 90 chr15 3016803 3016958 -100478016 + B4 SINE B4 95 242 -50 3 608 246 309 15 0 chr15 3016965 3017033 -100477941 + GA-rich Low_complexity Low_complexity 3 71 0 3 608 727 276 128 48 chr15 3017073 3017324 -100477650 + B4A SINE B4 6 276 -16 3 608 398 318 40 7 chr15 3017356 3017508 -100477466 - MIR SINE MIR -59 203 47 3 608 477 0 0 0 chr15 3017603 3017656 -100477318 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 3 608 1039 212 139 16 chr15 3018273 3018518 -100476456 + MTEa LTR MaLR 1 275 -104 3 608 2798 184 2 2 chr15 3018528 3019008 -100475966 + RMER15 LTR ERVL 6 485 -90 4 608 236 382 0 13 chr15 3019013 3019090 -100475884 - MER45R DNA Tip100 -1503 78 3 4 608 236 299 184 24 chr15 3019302 3019470 -100475504 + RLTR9A LTR ERVK 1 195 -173 4 608 343 151 0 42 chr15 3019522 3019640 -100475334 + T-rich Low_complexity Low_complexity 3 115 0 4 608 1159 96 7 0 chr15 3019643 3019789 -100475185 - B1_Mus1 SINE Alu 0 148 2 4 608 476 191 32 73 chr15 3019789 3019913 -100475061 + RLTR9A LTR ERVK 250 368 0 4 608 450 288 70 127 chr15 3019943 3020204 -100474770 + MLT1E2 LTR MaLR 50 361 -293 4 608 212 175 0 0 chr15 3020353 3020393 -100474581 + A-rich Low_complexity Low_complexity 1 40 0 4 608 2704 123 19 42 chr15 3020736 3021249 -100473725 + RLTR1D LTR ERV1 1 589 -16 4 608 1381 191 58 13 chr15 3021420 3021728 -100473246 + RLTR11A2 LTR ERVK 206 527 0 4 608 335 106 70 12 chr15 3021833 3021919 -100473055 + CT-rich Low_complexity Low_complexity 1 91 0 4 608 720 227 0 15 chr15 3022197 3022327 -100472647 + B1_Mur3 SINE Alu 1 128 -21 5 608 191 78 58 19 chr15 3022952 3023004 -100471970 + T-rich Low_complexity Low_complexity 2 55 0 5 608 182 132 105 0 chr15 3023472 3023510 -100471464 + L2 LINE L2 2835 2876 -543 5 608 609 14 0 0 chr15 3024748 3024818 -100470156 + (TGGA)n Simple_repeat Simple_repeat 4 73 0 5 608 224 260 0 0 chr15 3025240 3025290 -100469684 + C-rich Low_complexity Low_complexity 2 51 0 5 608 17107 70 8 2 chr15 3025683 3028616 -100466358 - L1Md_F2 LINE L1 0 6582 3632 5 608 4750 90 1 3 chr15 3028611 3029107 -100465867 - L1Md_F2 LINE L1 -4258 1625 1139 5 608 1711 52 0 0 chr15 3029107 3029300 -100465674 - B2_Mm1t SINE B2 0 193 1 5 608 4750 173 10 21 chr15 3029300 3029993 -100464981 - L1Md_F2 LINE L1 -5586 1138 446 5 608 451 243 36 9 chr15 3030182 3030294 -100464680 - B1_Mur1 SINE Alu -24 125 11 5 608 268 297 48 56 chr15 3030186 3030311 -100464663 - ID_B1 SINE B4 -25 199 76 5 608 230 228 17 50 chr15 3032224 3032284 -100462690 + RSINE1 SINE B4 2 59 -106 5 608 24 32 0 0 chr15 3032294 3032325 -100462649 + AT_rich Low_complexity Low_complexity 1 31 0 6 608 340 276 0 75 chr15 3032442 3032548 -100462426 + RSINE1 SINE B4 68 165 0 5 608 206 219 171 40 chr15 3034150 3034273 -100460701 - MIR3 SINE MIR -123 145 8 6 608 1953 204 56 11 chr15 3034787 3035249 -100459725 - Lx4B LINE L1 -2 7056 6574 6 608 1154 102 0 0 chr15 3035259 3035406 -100459568 - B1_Mus2 SINE Alu 0 147 1 6 608 6797 83 26 3 chr15 3035533 3036406 -100458568 + RLTR13B1 LTR ERVK 1 893 0 6 608 10623 92 6 8 chr15 3036942 3039189 -100455785 - L1_Mus1 LINE L1 0 6567 4329 6 608 2008 210 54 11 chr15 3039344 3039807 -100455167 - Lx4B LINE L1 -2 7056 6574 6 608 1211 135 6 17 chr15 3040557 3040738 -100454236 - B2_Mm2 SINE B2 -16 179 1 6 608 252 224 24 0 chr15 3041519 3041582 -100453392 + MIRc SINE MIR 75 142 -134 6 608 238 260 39 52 chr15 3043169 3043246 -100451728 + ID4 SINE ID 2 77 -6 6 608 1584 262 54 20 chr15 3043372 3043820 -100451154 + Lx6 LINE L1 6968 7430 -30 7 608 633 169 145 0 chr15 3044408 3044532 -100450442 + B1_Mus1 SINE Alu 5 146 -2 7 608 769 88 39 55 chr15 3044532 3044713 -100450261 + GA-rich Low_complexity Low_complexity 2 179 0 7 608 327 302 121 14 chr15 3044713 3044854 -100450120 + HAL1-3A_ME LINE L1 2284 2439 -419 7 608 230 200 44 0 chr15 3044857 3044902 -100450072 + polypurine Low_complexity Low_complexity 1 47 0 7 608 416 153 106 0 chr15 3044906 3044991 -100449983 + B3A SINE B2 1 94 -104 7 608 6589 65 27 1 chr15 3045008 3045836 -100449138 - L1_Mus1 LINE L1 0 6567 5719 7 608 428 329 52 19 chr15 3045836 3045991 -100448983 + B3 SINE B2 49 208 -8 7 608 262 283 140 10 chr15 3046064 3046164 -100448810 + PB1D10 SINE Alu 4 116 -1 7 608 771 262 16 0 chr15 3046573 3046756 -100448218 + B3 SINE B2 1 186 -30 7 608 838 239 159 41 chr15 3047910 3048181 -100446793 + Lx8 LINE L1 7171 7473 0 8 608 388 276 45 20 chr15 3048814 3048928 -100446046 - B1F SINE Alu 0 127 5 8 608 5532 56 1 0 chr15 3049193 3049840 -100445134 + L1Md_F2 LINE L1 5934 6581 -1 8 608 459 82 0 0 chr15 3049844 3049917 -100445057 + (CATA)n Simple_repeat Simple_repeat 2 74 0 8 608 29886 55 2 0 chr15 3050483 3054917 -100440057 - L1Md_F3 LINE L1 0 6584 2140 8 608 2957 72 0 3 chr15 3054917 3055280 -100439694 + L1_Mus1 LINE L1 6206 6567 0 8 608 627 228 218 34 chr15 3055700 3056081 -100438893 + L1MB2 LINE L1 5620 6070 -101 8 608 252 275 200 0 chr15 3056441 3056521 -100438453 - PB1D10 SINE Alu -21 96 1 8 608 317 148 37 12 chr15 3056689 3056771 -100438203 + (TA)n Simple_repeat Simple_repeat 2 85 0 8 608 850 164 0 0 chr15 3057577 3057711 -100437263 - B1_Mus2 SINE Alu -13 134 1 8 608 231 114 0 0 chr15 3057846 3057881 -100437093 - URR1B DNA MER1_type 0 225 191 9 608 454 324 36 36 chr15 3057890 3058327 -100436647 + RLTR15 LTR ERVK 10 317 -42 9 608 649 164 176 36 chr15 3058354 3058519 -100436455 - URR1B DNA MER1_type -37 188 1 9 608 420 187 43 11 chr15 3058810 3058902 -100436072 - RSINE1 SINE B4 -55 110 16 9 608 251 308 58 33 chr15 3060027 3060148 -100434826 - MTEb LTR MaLR -4 375 252 9 608 801 243 150 40 chr15 3060209 3060483 -100434491 - MTEa-int LTR MaLR -34 1546 1243 9 608 1480 322 111 71 chr15 3060486 3061500 -100433474 - MTEa-int LTR MaLR -524 1056 2 9 608 392 273 62 19 chr15 3061500 3061663 -100433311 - MTEa LTR MaLR -16 403 243 9 608 12214 54 7 5 chr15 3061913 3064144 -100430830 - L1Md_F2 LINE L1 -1 6581 4348 9 608 7966 61 5 1 chr15 3064421 3065448 -100429526 - L1_Mus1 LINE L1 -1 6653 5544 9 608 201 74 0 0 chr15 3068672 3068699 -100426275 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 608 2867 45 0 0 chr15 3068983 3069315 -100425659 - IAPEY3_LTR LTR ERVK 0 332 1 9 608 58951 65 13 5 chr15 3069315 3076936 -100418038 - IAPEY3-int LTR ERVK 0 7680 1 9 608 2900 42 0 0 chr15 3076936 3077268 -100417706 - IAPEY3_LTR LTR ERVK 0 332 1 9 608 214 272 95 19 chr15 3077463 3077568 -100417406 - MIRm SINE MIR -3 273 161 9 608 208 211 0 0 chr15 3079871 3079909 -100415065 + C-rich Low_complexity Low_complexity 1 38 0 1 608 405 0 0 0 chr15 3082285 3082330 -100412644 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 608 420 221 192 0 chr15 3082532 3082636 -100412338 + B3 SINE B2 89 212 -4 1 608 345 24 0 0 chr15 3083184 3083226 -100411748 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 608 477 0 0 0 chr15 3084370 3084423 -100410551 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 608 757 201 20 34 chr15 3084811 3084960 -100410014 - B1_Mur1 SINE Alu 0 149 3 1 608 422 161 0 9 chr15 3085004 3085117 -100409857 + GA-rich Low_complexity Low_complexity 1 112 0 1 608 505 239 18 9 chr15 3085452 3085566 -100409408 - RSINE1 SINE B4 -40 125 11 1 608 774 193 111 0 chr15 3086018 3086189 -100408785 - B2_Mm2 SINE B2 -5 190 1 1 608 245 228 0 106 chr15 3086542 3086623 -100408351 + B4A SINE B4 192 269 -23 1 608 306 0 0 0 chr15 3086623 3086657 -100408317 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 608 245 228 0 106 chr15 3086657 3086688 -100408286 + B4A SINE B4 270 292 0 1 608 305 362 85 6 chr15 3087684 3087848 -100407126 + L1ME3B LINE L1 1576 1752 -4414 1 608 374 333 81 46 chr15 3087964 3088310 -100406664 + L1ME3B LINE L1 5535 5892 -348 1 608 246 325 42 36 chr15 3088798 3088964 -100406010 - L2b LINE L2 -279 3096 2930 1 608 249 108 0 0 chr15 3089361 3089398 -100405576 + (ATG)n Simple_repeat Simple_repeat 2 38 0 1 608 406 291 56 12 chr15 3089835 3089995 -100404979 + MER20 DNA MER1_type 52 218 -1 1 608 631 308 112 11 chr15 3090029 3090305 -100404669 + Arthur1 DNA Tip100 368 671 -3276 1 608 401 288 61 7 chr15 3090374 3090521 -100404453 + RSINE1 SINE B4 4 158 -7 1 608 192 284 57 70 chr15 3091790 3091961 -100403013 - MIR SINE MIR -90 172 9 1 608 300 357 0 10 chr15 3093891 3093992 -100400982 - PB1D7 SINE Alu -6 114 15 1 608 186 171 0 0 chr15 3094497 3094538 -100400436 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1 608 517 212 35 0 chr15 3094617 3094730 -100400244 - RSINE1 SINE B4 -46 119 3 1 608 1291 201 111 6 chr15 3097114 3097429 -100397545 - RLTR1 LTR ERV1 0 624 277 1 608 443 271 66 0 chr15 3097739 3097861 -100397113 - B1_Mur3 SINE Alu -9 140 11 1 608 314 93 37 0 chr15 3098138 3098192 -100396782 + (CATA)n Simple_repeat Simple_repeat 3 58 0 1 608 22 80 0 0 chr15 3098608 3098658 -100396316 + AT_rich Low_complexity Low_complexity 1 50 0 1 608 201 74 0 0 chr15 3098941 3098968 -100396006 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 608 21 0 0 0 chr15 3099061 3099082 -100395892 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 325 153 0 27 chr15 3099221 3099295 -100395679 + GA-rich Low_complexity Low_complexity 3 74 0 1 608 227 240 133 0 chr15 3099379 3099454 -100395520 + B3A SINE B2 72 156 -42 1 608 591 74 0 0 chr15 3099559 3099640 -100395334 + (TGG)n Simple_repeat Simple_repeat 3 83 0 1 608 450 0 0 0 chr15 3100713 3100763 -100394211 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 608 363 23 0 0 chr15 3100763 3100806 -100394168 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 608 38385 43 2 3 chr15 3100819 3106949 -100388025 - L1Md_T LINE L1 0 6585 362 1 608 387 0 0 0 chr15 3107457 3107500 -100387474 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 608 254 259 23 0 chr15 3108188 3108264 -100386710 + CT-rich Low_complexity Low_complexity 1 77 0 1 608 210 118 0 0 chr15 3110972 3111006 -100383968 + (T)n Simple_repeat Simple_repeat 1 34 0 1 608 280 202 23 20 chr15 3111139 3111246 -100383728 + PB1D9 SINE Alu 23 132 -17 1 608 324 230 193 73 chr15 3111632 3111824 -100383150 - B3 SINE B2 -1 215 1 1 608 636 160 25 43 chr15 3112173 3112336 -100382638 - L1_Mus3 LINE L1 -1 6637 6478 1 608 263 275 11 11 chr15 3112359 3112451 -100382523 - MMTV-int LTR ERVK -4749 2504 2413 1 608 1136 58 0 0 chr15 3112851 3112989 -100381985 - RLTR45-int LTR ERVK -6426 818 681 1 608 4695 54 84 11 chr15 3113287 3113906 -100381068 - RLTR45-int LTR ERVK -6552 692 29 1 608 2493 119 76 81 chr15 3113911 3114395 -100380579 - RLTR45 LTR ERVK 0 482 1 1 608 180 111 0 0 chr15 3115014 3115041 -100379933 + (TATG)n Simple_repeat Simple_repeat 1 27 0 1 608 934 256 35 18 chr15 3115081 3115363 -100379611 - B4A SINE B4 -3 289 3 1 608 340 119 33 17 chr15 3115848 3115908 -100379066 + RMER17C LTR ERVK 1 61 -349 1 608 2215 116 18 3 chr15 3115909 3116239 -100378735 + IAPLTR1a_Mm LTR ERVK 1 335 -2 1 608 11198 98 92 28 chr15 3116239 3118843 -100376131 + IAPEz-int LTR ERVK 6 2774 -3707 1 608 3170 20 0 0 chr15 3118841 3119198 -100375776 + IAPEz-int LTR ERVK 4001 4357 -2124 1 608 5617 76 33 12 chr15 3119189 3119944 -100375030 + IAPEz-int LTR ERVK 5709 6479 -2 1 608 2215 116 18 3 chr15 3119946 3120276 -100374698 + IAPLTR1a_Mm LTR ERVK 1 335 -2 1 608 1189 171 37 68 chr15 3120278 3120630 -100374344 + RMER17C LTR ERVK 57 397 -13 1 608 440 252 124 16 chr15 3121085 3121214 -100373760 - B1_Mur2 SINE Alu -1 148 6 1 608 456 67 0 0 chr15 3121369 3121429 -100373545 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 608 256 278 77 11 chr15 3121519 3121610 -100373364 - B3A SINE B2 -100 98 2 1 608 243 0 0 0 chr15 3121638 3121665 -100373309 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 608 303 222 0 0 chr15 3122077 3122194 -100372780 + GA-rich Low_complexity Low_complexity 2 118 0 1 608 433 0 35 0 chr15 3122229 3122286 -100372688 + (GA)n Simple_repeat Simple_repeat 2 60 0 1 608 717 45 0 0 chr15 3122357 3122446 -100372528 + (GA)n Simple_repeat Simple_repeat 2 90 0 1 608 489 104 0 0 chr15 3123156 3123233 -100371741 + (GGA)n Simple_repeat Simple_repeat 3 79 0 1 608 1057 198 94 53 chr15 3123500 3123909 -100371065 + RMER17C LTR ERVK 16 439 -519 1 608 396 0 0 0 chr15 3124016 3124060 -100370914 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 1 608 30 0 0 0 chr15 3124763 3124793 -100370181 + AT_rich Low_complexity Low_complexity 1 30 0 1 608 238 289 69 78 chr15 3124811 3125029 -100369945 + L1_Mur3 LINE L1 4853 5068 -812 1 608 213 39 0 0 chr15 3125136 3125162 -100369812 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1 608 980 89 0 0 chr15 3125423 3125558 -100369416 - B1_Mus1 SINE Alu -2 146 12 1 608 379 363 33 33 chr15 3125591 3125924 -100369050 + L1MA7 LINE L1 5501 5833 -458 1 608 521 270 18 83 chr15 3125927 3126159 -100368815 + ORR1D1 LTR MaLR 2 284 -90 1 608 3915 166 92 33 chr15 3126234 3126307 -100368667 - MTC-int LTR MaLR -118 1140 1068 1 608 626 159 78 16 chr15 3126307 3126435 -100368539 + B1_Mus1 SINE Alu 1 136 -12 1 608 535 0 14 28 chr15 3126435 3126507 -100368467 + (TAAAA)n Simple_repeat Simple_repeat 2 72 0 1 608 3915 166 92 33 chr15 3126507 3127322 -100367652 - MTC-int LTR MaLR -191 1067 199 1 608 1889 126 0 0 chr15 3127322 3127608 -100367366 - L1_Mur2 LINE L1 -372 5505 5220 1 608 640 129 0 0 chr15 3127612 3127705 -100367269 + Lx4B LINE L1 6411 6503 -555 1 608 663 187 90 0 chr15 3127865 3127999 -100366975 + B1_Mus2 SINE Alu 1 146 -1 1 608 419 0 0 19 chr15 3128254 3128306 -100366668 + (TTA)n Simple_repeat Simple_repeat 1 51 0 1 608 3437 94 35 37 chr15 3128306 3128526 -100366448 - L1_Mus2 LINE L1 -10 6556 6336 1 608 558 0 0 0 chr15 3128526 3128588 -100366386 + (TC)n Simple_repeat Simple_repeat 2 63 0 1 608 432 0 0 0 chr15 3128588 3128635 -100366339 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 608 3437 94 35 37 chr15 3128635 3128932 -100366042 - L1_Mus2 LINE L1 -231 6335 6040 1 608 439 152 40 10 chr15 3128929 3129029 -100365945 - L1Md_F2 LINE L1 -12 6570 6468 1 608 766 192 14 14 chr15 3129154 3129302 -100365672 - B1_Mur4 SINE Alu -2 148 1 1 608 366 23 0 0 chr15 3130747 3130790 -100364184 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 1 608 1079 65 33 0 chr15 3130791 3130944 -100364030 - B2_Mm2 SINE B2 -37 158 1 1 608 542 275 22 0 chr15 3131068 3131206 -100363768 - B1_Mm SINE Alu 0 147 7 1 608 27 0 0 0 chr15 3131227 3131254 -100363720 + AT_rich Low_complexity Low_complexity 1 27 0 1 608 320 94 0 19 chr15 3131498 3131552 -100363422 + (CATA)n Simple_repeat Simple_repeat 2 54 0 1 608 1102 142 11 11 chr15 3131713 3131891 -100363083 + B2_Mm1t SINE B2 2 179 -14 1 608 257 118 402 9 chr15 3131976 3132073 -100362901 + B2_Mm2 SINE B2 47 181 -14 1 608 222 37 0 0 chr15 3132073 3132100 -100362874 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 608 678 255 46 69 chr15 3132307 3132480 -100362494 + B3 SINE B2 1 169 -26 1 608 404 275 42 48 chr15 3132522 3132690 -100362284 + MTEa LTR MaLR 17 183 -196 1 608 317 24 0 23 chr15 3132690 3132724 -100362250 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 608 833 54 9 0 chr15 3132724 3132835 -100362139 + (GAA)n Simple_repeat Simple_repeat 3 114 0 1 608 317 24 0 23 chr15 3132835 3132843 -100362131 + (GA)n Simple_repeat Simple_repeat 2 9 0 1 608 418 305 56 88 chr15 3132847 3133063 -100361911 + MTEa LTR MaLR 168 376 -3 1 608 1431 208 128 19 chr15 3133145 3133512 -100361462 - MTD LTR MaLR 0 419 13 1 608 1954 169 42 17 chr15 3133618 3133974 -100361000 - ORR1B2 LTR MaLR -2 365 1 1 608 1041 101 0 45 chr15 3134129 3134284 -100360690 + B1_Mus1 SINE Alu 1 148 0 1 608 352 138 77 44 chr15 3135457 3135548 -100359426 + ID_B1 SINE B4 122 215 -9 1 608 488 283 80 40 chr15 3135716 3135915 -100359059 + B3 SINE B2 2 208 -8 1 608 445 213 164 102 chr15 3136086 3136311 -100358663 + MT2A LTR ERVL 28 266 -267 1 608 371 214 158 4 chr15 3136306 3136408 -100358566 + MT2A LTR ERVL 359 552 -49 1 608 263 152 38 0 chr15 3136463 3136542 -100358432 + MT2A LTR ERVL 452 533 0 1 608 946 259 48 67 chr15 3137066 3137457 -100357517 - MTEb LTR MaLR -2 377 4 1 608 2519 141 2 0 chr15 3137453 3137871 -100357103 - MT2B2 LTR ERVL 0 584 166 1 608 27 29 0 0 chr15 3137930 3137964 -100357010 + AT_rich Low_complexity Low_complexity 1 34 0 1 608 1907 124 42 0 chr15 3137964 3138270 -100356704 + ORR1A2 LTR MaLR 1 319 -8 1 608 10063 142 65 27 chr15 3138274 3140165 -100354809 + ORR1A2-int LTR MaLR 1 1963 0 1 608 1541 132 0 4 chr15 3140165 3140416 -100354558 + ORR1A2 LTR MaLR 1 250 -77 1 608 604 91 0 0 chr15 3140420 3140508 -100354466 - ORR1A2 LTR MaLR -2 325 238 1 608 261 222 0 0 chr15 3140498 3140552 -100354422 + B1_Mus2 SINE Alu 93 146 -1 1 608 1017 208 53 65 chr15 3140814 3141223 -100353751 - RMER2 LTR ERV1 -69 498 1 1 608 1146 239 74 59 chr15 3141701 3142092 -100352882 + RMER10A LTR ERVL 5 401 -41 1 608 297 214 0 27 chr15 3142557 3142643 -100352331 - B1_Mur2 SINE Alu -5 144 38 2 608 291 135 19 0 chr15 3142650 3142702 -100352272 + Ricksha DNA MuDR 1657 1709 -1537 2 608 637 209 21 7 chr15 3142710 3142850 -100352124 + B1_Mur4 SINE Alu 9 150 0 2 608 380 216 14 0 chr15 3142856 3142930 -100352044 + Ricksha DNA MuDR 1693 1767 -1479 2 608 308 336 90 73 chr15 3142952 3143186 -100351788 - B4A SINE B4 -6 286 49 2 608 3569 111 30 28 chr15 3143329 3143893 -100351081 - Lx LINE L1 -5 6649 6085 2 608 3401 106 32 0 chr15 3143893 3144504 -100350470 + Lx LINE L1 5460 6085 -569 2 608 3133 144 161 21 chr15 3144746 3145400 -100349574 - RMER6A LTR ERVK -11 745 1 2 608 418 279 114 12 chr15 3145407 3145574 -100349400 + Ricksha DNA MuDR 2115 2298 -948 2 9 421 297 0 22 chr15 3145597 3145776 -100349198 + Ricksha DNA MuDR 2285 2459 -787 2 609 691 201 0 61 chr15 3146059 3146207 -100348767 + ID_B1 SINE B4 82 220 -4 2 609 2996 57 35 42 chr15 3146445 3146848 -100348126 + MTB LTR MaLR 1 400 0 2 609 1979 184 16 16 chr15 3146850 3147232 -100347742 - RLTR14 LTR ERV1 0 382 1 2 609 343 305 0 0 chr15 3147291 3147373 -100347601 - B1F SINE Alu -66 83 2 2 609 250 244 93 47 chr15 3147378 3147464 -100347510 - PB1D10 SINE Alu -1 116 27 2 609 292 149 67 13 chr15 3147544 3147619 -100347355 + Ricksha DNA MuDR 3004 3082 -164 2 609 334 57 0 36 chr15 3147627 3147682 -100347292 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 2 609 251 317 137 10 chr15 3147686 3147788 -100347186 - PB1D10 SINE Alu -2 115 1 2 609 604 124 57 0 chr15 3147965 3148070 -100346904 - B1_Mur3 SINE Alu -5 144 34 2 609 7021 59 25 8 chr15 3149161 3150039 -100344935 - RLTR13B1 LTR ERVK 0 893 1 2 609 752 160 84 0 chr15 3150185 3150316 -100344658 - B1_Mus1 SINE Alu -2 146 5 2 609 1790 116 39 0 chr15 3150481 3150765 -100344209 + RLTR44A LTR ERVK 1 295 -110 2 609 835 119 162 6 chr15 3150960 3151120 -100343854 + URR1A DNA MER1_type 42 226 0 2 609 2320 124 25 17 chr15 3151185 3151545 -100343429 + Lx2 LINE L1 6635 6997 0 2 609 471 264 8 8 chr15 3151933 3152059 -100342915 + B3 SINE B2 20 145 -71 2 609 444 138 0 0 chr15 3152082 3152147 -100342827 - Lx4B LINE L1 -111 6947 6883 2 609 263 192 36 60 chr15 3152147 3152230 -100342744 + RMER5 LTR ERV1 454 534 0 2 609 224 246 25 25 chr15 3152732 3152853 -100342121 + (TATAA)n Simple_repeat Simple_repeat 5 125 0 2 609 368 273 100 106 chr15 3152914 3153074 -100341900 - RSINE1 SINE B4 0 165 7 2 609 482 171 268 32 chr15 3153817 3153974 -100341000 + B3 SINE B2 23 216 0 2 609 1909 134 44 0 chr15 3154223 3154521 -100340453 - RLTR10E LTR ERVK 0 311 1 2 609 841 261 15 25 chr15 3154776 3154980 -100339994 - B3 SINE B2 -6 210 9 2 609 2846 25 0 0 chr15 3155952 3156274 -100338700 - RLTRETN_Mm LTR ERVK 0 322 1 2 609 2765 89 47 3 chr15 3156365 3156748 -100338226 + MTB LTR MaLR 1 400 0 2 609 575 188 26 32 chr15 3157260 3157414 -100337560 - RLTR15 LTR ERVK -15 344 192 2 609 458 283 78 6 chr15 3157408 3157635 -100337339 + ORR1D2 LTR MaLR 126 372 -2 2 609 630 281 11 11 chr15 3157752 3157939 -100337035 - B3A SINE B2 -11 187 1 2 609 22 35 0 0 chr15 3158132 3158161 -100336813 + AT_rich Low_complexity Low_complexity 1 29 0 2 609 1352 223 71 20 chr15 3158294 3158646 -100336328 + ORR1D2 LTR MaLR 1 370 0 2 609 1809 170 40 0 chr15 3158970 3159299 -100335675 - ORR1C1 LTR MaLR -16 362 21 2 609 198 342 54 9 chr15 3159467 3159579 -100335395 - L2 LINE L2 -813 2606 2490 2 609 220 376 0 76 chr15 3160133 3160175 -100334799 - PB1D10 SINE Alu -32 85 47 2 609 1895 156 80 8 chr15 3160175 3160562 -100334412 + RLTR9F LTR ERVK 1 415 0 2 609 220 376 0 76 chr15 3160562 3160611 -100334363 - PB1D10 SINE Alu -71 46 1 2 609 639 39 0 0 chr15 3160735 3160813 -100334161 + (TG)n Simple_repeat Simple_repeat 2 79 0 2 609 3120 73 2 10 chr15 3161102 3161505 -100333469 + MTB LTR MaLR 1 400 0 2 609 459 308 32 70 chr15 3161816 3162001 -100332973 - MTEa LTR MaLR -197 182 5 2 609 278 111 0 22 chr15 3162049 3162095 -100332879 + MER5B DNA MER1_type 3 47 -131 2 609 6766 34 5 0 chr15 3162276 3163067 -100331907 - L1Md_F3 LINE L1 0 6584 5790 2 609 5997 56 0 0 chr15 3163067 3163816 -100331158 - L1_Mm LINE L1 -1069 4814 4066 2 609 338 0 24 0 chr15 3164149 3164191 -100330783 + (TTATA)n Simple_repeat Simple_repeat 4 46 0 2 609 408 67 0 0 chr15 3164441 3164501 -100330473 + (TCTCTG)n Simple_repeat Simple_repeat 2 61 0 2 609 288 0 0 0 chr15 3164503 3164535 -100330439 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 609 189 0 0 0 chr15 3164538 3164559 -100330415 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 2 609 270 0 0 0 chr15 3164841 3164871 -100330103 + (TAA)n Simple_repeat Simple_repeat 3 32 0 2 609 596 265 6 47 chr15 3164877 3165047 -100329927 + RSINE1 SINE B4 3 165 0 2 609 942 263 79 73 chr15 3165053 3165558 -100329416 - MER67C LTR ERV1 -47 664 157 2 609 422 271 75 17 chr15 3165558 3165678 -100329296 + RSINE1 SINE B4 1 127 -38 2 609 1203 94 0 0 chr15 3165998 3166169 -100328805 + (TCTCC)n Simple_repeat Simple_repeat 5 175 0 2 609 2449 87 3 0 chr15 3166437 3166759 -100328215 + ORR1A2 LTR MaLR 5 327 0 2 609 343 246 0 0 chr15 3166922 3166991 -100327983 - PB1D10 SINE Alu -6 111 43 2 609 23 0 0 0 chr15 3167011 3167034 -100327940 + AT_rich Low_complexity Low_complexity 1 23 0 2 609 321 60 43 29 chr15 3167146 3167215 -100327759 + (CAAAA)n Simple_repeat Simple_repeat 2 71 0 2 609 1180 235 97 61 chr15 3169824 3170268 -100324706 - RMER5 LTR ERV1 -2 532 73 2 609 336 210 0 47 chr15 3170375 3170460 -100324514 - RLTR31_Mm LTR ERVK 0 561 481 2 609 1010 176 61 34 chr15 3170468 3170732 -100324242 - RLTR31_Mm LTR ERVK -290 271 1 2 609 865 131 0 0 chr15 3170883 3171013 -100323961 + B3 SINE B2 1 130 -86 2 609 269 258 0 0 chr15 3171755 3171817 -100323157 + ID4_ SINE ID 6 67 -16 2 609 846 236 58 55 chr15 3171763 3172037 -100322937 + B4A SINE B4 14 288 -4 2 609 333 0 0 0 chr15 3172082 3172119 -100322855 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 609 355 238 109 0 chr15 3172234 3172335 -100322639 - B3 SINE B2 0 216 105 2 609 389 346 62 14 chr15 3172380 3172588 -100322386 - L1MA4A LINE L1 -367 5936 5719 2 609 918 277 43 11 chr15 3172766 3173043 -100321931 + B4A SINE B4 2 287 -5 2 609 452 257 126 42 chr15 3173190 3173381 -100321593 - B3 SINE B2 -3 213 7 2 609 353 297 18 0 chr15 3173725 3173836 -100321138 - PB1D9 SINE Alu -7 113 1 2 609 293 231 64 0 chr15 3173836 3173914 -100321060 - MER2 DNA MER2_type -146 199 117 2 609 210 71 0 0 chr15 3173914 3173942 -100321032 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 609 345 287 40 0 chr15 3173954 3174055 -100320919 - PB1D10 SINE Alu -1 116 12 2 609 702 251 104 5 chr15 3174298 3174490 -100320484 + B3 SINE B2 1 211 -5 2 609 320 295 60 27 chr15 3174751 3174767 -100320207 - B4 SINE B4 -68 224 209 2 609 555 16 0 0 chr15 3174767 3174831 -100320143 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 609 610 183 9 0 chr15 3174831 3174946 -100320028 - B1_Mus1 SINE Alu -32 116 1 2 609 320 295 60 27 chr15 3174946 3174964 -100320010 - B4 SINE B4 -84 208 71 2 609 225 0 0 0 chr15 3175018 3175043 -100319931 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 609 221 356 69 0 chr15 3175065 3175152 -100319822 - RSINE1 SINE B4 -70 95 3 2 609 212 179 0 0 chr15 3175590 3175629 -100319345 - B4 SINE B4 -220 72 34 2 609 873 185 0 0 chr15 3175631 3175777 -100319197 + B1_Mur3 SINE Alu 4 149 0 2 609 279 211 32 128 chr15 3175882 3176007 -100318967 - MLT1A LTR MaLR -249 125 13 2 609 369 0 0 0 chr15 3176228 3176269 -100318705 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 2 609 241 296 0 0 chr15 3177343 3177414 -100317560 - MIRc SINE MIR -133 135 65 2 609 180 0 0 0 chr15 3178438 3178458 -100316516 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 609 235 321 36 0 chr15 3179482 3179594 -100315380 + LTR16A1 LTR ERVL 276 391 -65 2 609 301 22 43 0 chr15 3179665 3179711 -100315263 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 2 609 346 307 124 64 chr15 3180440 3180673 -100314301 - LTR33 LTR ERVL -168 347 101 2 609 291 261 0 0 chr15 3181315 3181384 -100313590 + ID4 SINE ID 2 70 -13 2 609 1379 74 0 6 chr15 3181649 3181826 -100313148 + B2_Mm2 SINE B2 1 176 -19 2 609 267 259 24 47 chr15 3181993 3182078 -100312896 + ID2 SINE ID 1 83 0 2 609 231 61 0 0 chr15 3182085 3182118 -100312856 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 2 609 1604 206 47 84 chr15 3183453 3183883 -100311091 - RLTR18B LTR ERVK -61 451 33 2 609 1774 137 69 94 chr15 3183883 3184024 -100310950 - RMER10B LTR ERVL 0 398 261 2 609 243 0 0 0 chr15 3184024 3184051 -100310923 + (GGGGA)n Simple_repeat Simple_repeat 5 31 0 2 609 1774 137 69 94 chr15 3184051 3184313 -100310661 - RMER10B LTR ERVL -138 260 5 2 609 1604 206 47 84 chr15 3184313 3184332 -100310642 - RLTR18B LTR ERVK -480 32 19 2 609 899 324 78 60 chr15 3184439 3184861 -100310113 - MER34A1 LTR ERV1 -22 565 133 2 609 1126 74 12 0 chr15 3184861 3185023 -100309951 + (GAAA)n Simple_repeat Simple_repeat 4 167 0 2 609 899 324 78 60 chr15 3185023 3185154 -100309820 - MER34A1 LTR ERV1 -455 132 2 2 609 601 270 26 20 chr15 3185497 3185609 -100309365 + RSINE1 SINE B4 12 124 -41 2 609 408 40 0 0 chr15 3185609 3185659 -100309315 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 609 601 270 26 20 chr15 3185659 3185697 -100309277 + RSINE1 SINE B4 125 162 -3 2 609 24 32 0 0 chr15 3185697 3185728 -100309246 + AT_rich Low_complexity Low_complexity 1 31 0 2 609 363 238 119 0 chr15 3186817 3186901 -100308073 + PB1D10 SINE Alu 12 105 -12 2 609 760 153 209 42 chr15 3187329 3187520 -100307454 + URR1A DNA MER1_type 1 223 -3 2 609 21 0 0 0 chr15 3188410 3188431 -100306543 + AT_rich Low_complexity Low_complexity 1 21 0 2 609 565 296 7 14 chr15 3188527 3188671 -100306303 + B1_Mur1 SINE Alu 1 143 -6 3 609 801 179 5 118 chr15 3188682 3188885 -100306089 - B2_Mm2 SINE B2 -14 181 2 3 609 255 217 47 35 chr15 3189382 3189468 -100305506 - MTEa LTR MaLR 0 379 293 3 609 301 393 18 6 chr15 3190295 3190459 -100304515 + MER5A1 DNA MER1_type 1 166 0 3 609 36546 53 4 4 chr15 3190527 3195110 -100299864 - L1Md_F3 LINE L1 0 6584 1995 3 609 1501 148 33 66 chr15 3195110 3195443 -100299531 + RLTRETN_Mm LTR ERVK 1 322 0 3 609 36546 92 4 16 chr15 3195443 3196975 -100297999 - L1Md_F3 LINE L1 -3889 1994 492 3 609 303 231 51 0 chr15 3197007 3197085 -100297889 + RSINE1 SINE B4 2 83 -82 3 609 365 73 24 35 chr15 3197416 3197501 -100297473 + (TTTTG)n Simple_repeat Simple_repeat 2 85 0 3 609 450 0 0 0 chr15 3198644 3198694 -100296280 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 609 682 147 16 0 chr15 3199081 3199210 -100295764 + CT-rich Low_complexity Low_complexity 4 134 0 3 609 1104 68 0 0 chr15 3199357 3199503 -100295471 + (TTTTC)n Simple_repeat Simple_repeat 4 149 0 3 609 188 111 0 27 chr15 3199504 3199541 -100295433 + (TTCCC)n Simple_repeat Simple_repeat 4 39 0 3 609 231 114 0 0 chr15 3199981 3200016 -100294958 + (TAGTG)n Simple_repeat Simple_repeat 4 38 0 3 609 322 236 11 11 chr15 3200018 3200108 -100294866 + MER58B DNA MER1_type 248 337 -4 3 609 444 345 22 0 chr15 3200332 3200471 -100294503 - RSINE1 SINE B4 -1 164 23 3 609 396 329 88 71 chr15 3201488 3201727 -100293247 + MER68 LTR ERVL 27 269 -294 3 609 180 0 0 0 chr15 3202817 3202837 -100292137 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 3 609 248 346 9 28 chr15 3203722 3203829 -100291145 + L1M2 LINE L1 5693 5797 -494 3 609 443 248 149 0 chr15 3204016 3204137 -100290837 + Lx8 LINE L1 6765 6903 -570 3 609 23 33 0 0 chr15 3204298 3204328 -100290646 + AT_rich Low_complexity Low_complexity 1 30 0 3 609 1283 258 51 87 chr15 3204342 3204390 -100290584 + Lx8 LINE L1 6906 6950 -523 3 609 817 204 0 13 chr15 3204390 3204539 -100290435 - B1_Mur1 SINE Alu -2 147 1 3 609 1283 258 51 87 chr15 3204539 3204744 -100290230 + Lx8 LINE L1 6951 7141 -332 3 609 293 0 27 0 chr15 3204744 3204781 -100290193 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 3 609 1283 258 51 87 chr15 3204781 3204823 -100290151 + Lx8 LINE L1 7142 7170 -303 3 609 1477 235 21 49 chr15 3204823 3205208 -100289766 - ORR1D1 LTR MaLR 0 374 1 3 609 1283 258 51 87 chr15 3205208 3205381 -100289593 + Lx8 LINE L1 7171 7359 -114 3 609 378 250 36 18 chr15 3205409 3205519 -100289455 - Lx8 LINE L1 -2 7471 7360 3 609 273 235 85 12 chr15 3205569 3205651 -100289323 - MIR SINE MIR -110 152 65 3 609 22 0 0 0 chr15 3205818 3205840 -100289134 + AT_rich Low_complexity Low_complexity 1 22 0 3 609 364 198 44 55 chr15 3205909 3206000 -100288974 - PB1D10 SINE Alu -6 111 22 3 609 313 263 109 20 chr15 3206338 3206439 -100288535 - MLT1B LTR MaLR -278 112 3 3 609 3130 128 55 6 chr15 3207466 3208087 -100286887 - L1_Mur2 LINE L1 -4089 1788 1142 3 609 4247 178 42 14 chr15 3208097 3208883 -100286091 + Lx5 LINE L1 6240 7047 -3 3 609 264 225 80 14 chr15 3208991 3209084 -100285890 - B1_Mus1 SINE Alu 0 117 13 3 609 230 319 28 0 chr15 3209024 3209096 -100285878 - ID_B1 SINE B4 -70 154 81 3 609 2400 128 32 27 chr15 3209233 3209634 -100285340 - MTB_Mm LTR MaLR -4 403 1 3 609 21 36 0 0 chr15 3209701 3209729 -100285245 + AT_rich Low_complexity Low_complexity 1 28 0 3 609 339 341 17 10 chr15 3210014 3210161 -100284813 - MIR SINE MIR -112 164 18 3 609 241 342 0 0 chr15 3210705 3210778 -100284196 - ID4 SINE ID -9 74 2 3 609 373 232 58 74 chr15 3210783 3210904 -100284070 - B1F1 SINE Alu -7 142 24 3 609 189 107 0 0 chr15 3211234 3211262 -100283712 + (A)n Simple_repeat Simple_repeat 1 28 0 3 609 2105 122 0 3 chr15 3211280 3211593 -100283381 + Lx LINE L1 6341 6652 -2 3 609 566 265 113 5 chr15 3211874 3212060 -100282914 - ID_B1 SINE B4 -12 212 7 3 609 537 110 0 0 chr15 3212072 3212154 -100282820 + (TCCC)n Simple_repeat Simple_repeat 4 85 0 3 609 305 257 40 13 chr15 3212160 3212235 -100282739 - ID4_ SINE ID -4 79 3 3 609 315 71 0 0 chr15 3212373 3212415 -100282559 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 3 609 347 145 0 5 chr15 3212429 3212494 -100282480 - B2_Mm2 SINE B2 -107 109 47 3 609 1411 68 11 0 chr15 3212541 3212718 -100282256 - B2_Mm1t SINE B2 -14 179 1 3 609 21 0 0 0 chr15 3212738 3212759 -100282215 + AT_rich Low_complexity Low_complexity 1 21 0 3 609 994 277 90 6 chr15 3212938 3213294 -100281680 + MLT1B LTR MaLR 1 386 -4 3 609 554 215 83 0 chr15 3213436 3213557 -100281417 + B1_Mur1 SINE Alu 14 144 -5 3 609 498 257 0 9 chr15 3213611 3213717 -100281257 + B4A SINE B4 183 287 -5 3 609 3739 203 26 49 chr15 3213732 3214643 -100280331 + RMER13B LTR ERVK 15 904 -4 3 609 783 312 49 21 chr15 3214854 3215056 -100279918 + MTEb LTR MaLR 1 199 -180 3 609 180 0 0 0 chr15 3215056 3215076 -100279898 + (TC)n Simple_repeat Simple_repeat 2 21 0 3 609 783 312 49 21 chr15 3215076 3215161 -100279813 + MTEb LTR MaLR 200 295 -84 3 609 509 128 23 0 chr15 3215228 3215314 -100279660 + PB1D9 SINE Alu 27 114 -6 3 609 281 26 0 26 chr15 3215317 3215356 -100279618 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 3 609 360 0 0 0 chr15 3217378 3217418 -100277556 + (TATG)n Simple_repeat Simple_repeat 1 40 0 3 609 483 226 68 25 chr15 3217418 3217536 -100277438 - B1_Mur2 SINE Alu -13 136 14 3 609 1062 73 7 0 chr15 3217812 3217949 -100277025 - B1_Mm SINE Alu -9 138 1 3 609 441 36 0 0 chr15 3218780 3218835 -100276139 + (TTA)n Simple_repeat Simple_repeat 3 57 0 3 609 565 259 92 25 chr15 3219175 3219405 -100275569 + Lx8 LINE L1 6804 7036 -660 3 609 1275 310 53 42 chr15 3219455 3219960 -100275014 + Lx8 LINE L1 6963 7473 0 3 609 274 262 48 143 chr15 3220057 3220204 -100274770 + RSINE1 SINE B4 11 143 -22 3 609 246 32 0 0 chr15 3220232 3220263 -100274711 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 609 408 67 0 0 chr15 3220263 3220322 -100274652 + (CAGAGA)n Simple_repeat Simple_repeat 3 62 0 3 609 27 0 0 0 chr15 3221214 3221241 -100273733 + AT_rich Low_complexity Low_complexity 1 27 0 3 609 1125 75 0 0 chr15 3221631 3221778 -100273196 - B1_Mus1 SINE Alu 0 148 2 3 609 342 0 0 0 chr15 3222299 3222337 -100272637 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 609 303 311 27 36 chr15 3222565 3222675 -100272299 + MIRb SINE MIR 38 146 -122 3 609 374 263 101 36 chr15 3222908 3223046 -100271928 - B1_Mur1 SINE Alu -2 147 1 3 609 752 191 7 45 chr15 3223086 3223240 -100271734 - B1_Mur2 SINE Alu -1 148 1 3 609 328 260 77 6 chr15 3223249 3223370 -100271604 - PB1D7 SINE Alu -21 127 1 3 609 481 266 32 0 chr15 3223409 3223533 -100271441 - B1F SINE Alu -21 128 1 3 609 234 174 0 0 chr15 3223541 3223587 -100271387 + CT-rich Low_complexity Low_complexity 3 48 0 3 609 431 63 16 0 chr15 3225050 3225113 -100269861 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 609 410 313 25 25 chr15 3226560 3226678 -100268296 + B1F SINE Alu 31 148 -1 3 609 319 266 25 0 chr15 3226681 3226760 -100268214 + ID4 SINE ID 1 81 -2 3 609 27 0 0 0 chr15 3226886 3226913 -100268061 + AT_rich Low_complexity Low_complexity 1 27 0 3 609 952 230 24 0 chr15 3227474 3227683 -100267291 + B3 SINE B2 3 216 0 3 609 27 29 0 0 chr15 3228043 3228077 -100266897 + AT_rich Low_complexity Low_complexity 1 34 0 3 609 292 212 68 34 chr15 3228541 3228629 -100266345 - Kanga1 DNA Tc2 -22 1723 1633 3 609 373 315 147 47 chr15 3232259 3232812 -100262162 + LTR84b LTR ERVL 131 761 0 3 609 1073 282 40 34 chr15 3233198 3233547 -100261427 - ORR1E LTR MaLR 0 359 9 3 609 363 293 85 88 chr15 3233764 3233880 -100261094 + ORR1C2 LTR MaLR 5 116 -278 3 609 378 100 0 0 chr15 3233880 3233940 -100261034 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 609 565 260 111 23 chr15 3233940 3234130 -100260844 + ORR1C2 LTR MaLR 117 310 -84 3 609 29 84 0 0 chr15 3234139 3234210 -100260764 + AT_rich Low_complexity Low_complexity 1 71 0 3 609 1027 196 237 26 chr15 3235610 3235691 -100259283 + ORR1D2 LTR MaLR 1 96 -274 3 609 1130 38 25 0 chr15 3235691 3235851 -100259123 + (TATAG)n Simple_repeat Simple_repeat 5 168 0 3 609 1027 196 237 26 chr15 3235851 3236073 -100258901 + ORR1D2 LTR MaLR 97 367 -3 3 609 1838 273 136 69 chr15 3236082 3237178 -100257796 + ORR1D2-int LTR MaLR 1 1109 -471 3 609 973 186 27 103 chr15 3237176 3237439 -100257535 - ORR1E-int LTR MaLR -87 1283 1041 3 609 192 77 0 0 chr15 3237838 3237864 -100257110 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 3 609 21 36 0 0 chr15 3238059 3238087 -100256887 + AT_rich Low_complexity Low_complexity 1 28 0 3 609 21 57 0 0 chr15 3238388 3238423 -100256551 + AT_rich Low_complexity Low_complexity 1 35 0 3 609 488 297 28 0 chr15 3238482 3238627 -100256347 - B1F2 SINE Alu 0 149 1 3 609 268 256 146 15 chr15 3238627 3238793 -100256181 - L1M5 LINE L1 -296 5883 5698 3 609 1580 76 0 0 chr15 3238799 3238996 -100255978 - Lx2 LINE L1 -366 6631 6435 3 609 303 189 62 2 chr15 3239005 3239096 -100255878 - L1M5 LINE L1 -482 5697 5603 3 609 249 235 63 10 chr15 3239147 3239296 -100255678 - L1M5 LINE L1 -871 5473 5319 3 609 2901 60 34 8 chr15 3239563 3239949 -100255025 + MTA_Mm LTR MaLR 1 396 0 3 609 1285 276 20 3 chr15 3240532 3240877 -100254097 + ORR1E LTR MaLR 3 353 -6 3 609 238 155 0 27 chr15 3240968 3240996 -100253978 + polypyrimidine Low_complexity Low_complexity 44 71 0 3 609 189 0 0 0 chr15 3240996 3241017 -100253957 + (CA)n Simple_repeat Simple_repeat 1 21 0 3 609 238 155 0 27 chr15 3241017 3241061 -100253913 + CT-rich Low_complexity Low_complexity 2 43 0 3 609 213 65 0 0 chr15 3241060 3241091 -100253883 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 609 539 224 0 3 chr15 3241152 3241492 -100253482 + (CA)n Simple_repeat Simple_repeat 1 338 0 3 609 507 79 0 13 chr15 3242513 3242590 -100252384 - B1_Mur4 SINE Alu 0 150 75 3 609 231 36 0 0 chr15 3242776 3242804 -100252170 + (TTAGGG)n Simple_repeat Simple_repeat 5 32 0 3 609 475 289 46 15 chr15 3242857 3242987 -100251987 + B1F SINE Alu 1 134 -15 4 609 602 279 15 0 chr15 3243010 3243146 -100251828 + RSINE1 SINE B4 3 140 -25 4 609 618 223 127 5 chr15 3243315 3243504 -100251470 - L1M3 LINE L1 -438 5742 5531 4 609 590 238 6 58 chr15 3243509 3243665 -100251309 - B4 SINE B4 -66 226 79 4 609 247 292 15 0 chr15 3243665 3243730 -100251244 + CT-rich Low_complexity Low_complexity 3 68 0 4 609 1231 137 68 10 chr15 3244071 3244278 -100250696 - MTC LTR MaLR -138 283 65 4 609 312 27 0 0 chr15 3244283 3244320 -100250654 + (TC)n Simple_repeat Simple_repeat 2 38 0 4 609 2914 266 79 14 chr15 3244320 3245131 -100249843 - RMER1C Other Other -14 1328 465 4 609 570 213 31 0 chr15 3245131 3245258 -100249716 - B1_Mur4 SINE Alu -18 132 2 4 609 360 180 0 0 chr15 3245258 3245319 -100249655 - MTC LTR MaLR -360 61 1 4 609 248 289 194 84 chr15 3245397 3245681 -100249293 + LTR88c LTR Genie? 4 318 -544 4 609 376 316 52 9 chr15 3246497 3246612 -100248362 + ORR1E LTR MaLR 10 129 -230 4 609 546 301 76 49 chr15 3246614 3246731 -100248243 - L1MC3 LINE L1 -370 7415 7302 4 609 321 26 0 0 chr15 3246731 3246769 -100248205 + (CACAT)n Simple_repeat Simple_repeat 4 41 0 4 609 546 301 76 49 chr15 3246769 3247021 -100247953 - L1MC3 LINE L1 -484 7301 7036 4 609 301 250 125 0 chr15 3247037 3247141 -100247833 - L1MC3 LINE L1 -832 6953 6837 4 609 302 318 18 45 chr15 3247149 3247261 -100247713 - PB1D10 SINE Alu -7 110 2 4 609 284 224 90 0 chr15 3247276 3247343 -100247631 - L1MC3 LINE L1 -1025 6760 6688 4 609 493 149 96 7 chr15 3247398 3247533 -100247441 + Lx9 LINE L1 7495 7641 -3 4 609 545 269 17 78 chr15 3247602 3247781 -100247193 - RSINE1 SINE B4 -2 163 1 4 609 324 0 0 0 chr15 3248682 3248718 -100246256 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 609 314 289 0 0 chr15 3248895 3248985 -100245989 + PB1 SINE Alu 32 121 -6 4 609 835 293 115 18 chr15 3249832 3250232 -100244742 + Lx8 LINE L1 6976 7414 -59 4 609 239 151 0 19 chr15 3250309 3250363 -100244611 + Lx8 LINE L1 7420 7472 -1 4 609 22 0 0 0 chr15 3250426 3250448 -100244526 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 299 293 27 0 chr15 3250516 3250591 -100244383 + MER99 DNA hAT? 1 77 -754 4 609 696 234 64 10 chr15 3250797 3251000 -100243974 - B3 SINE B2 -1 215 2 4 609 291 228 55 6 chr15 3251419 3251582 -100243392 + (TTATA)n Simple_repeat Simple_repeat 4 174 0 4 609 672 13 0 0 chr15 3252671 3252748 -100242226 + (TA)n Simple_repeat Simple_repeat 1 77 0 4 609 234 105 0 0 chr15 3252821 3252859 -100242115 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 609 412 247 0 0 chr15 3252874 3252955 -100242019 - B1_Mur4 SINE Alu -67 83 3 4 609 300 224 0 43 chr15 3252895 3252965 -100242009 - ID_B1 SINE B4 -82 142 76 4 609 230 322 35 9 chr15 3253947 3254063 -100240911 + MIR SINE MIR 90 208 -54 4 609 671 174 16 8 chr15 3254416 3254538 -100240436 + RLTR17 LTR ERVK 244 366 -326 4 609 440 244 44 26 chr15 3254571 3254712 -100240262 - L1M2 LINE L1 -2407 3736 3599 4 609 321 26 0 0 chr15 3254712 3254750 -100240224 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 609 290 87 22 0 chr15 3254744 3254790 -100240184 + (TTCC)n Simple_repeat Simple_repeat 3 49 0 4 609 722 225 19 39 chr15 3254829 3255037 -100239937 - L1_Rod LINE L1 -2403 3444 3241 4 609 510 152 0 0 chr15 3255037 3255162 -100239812 + CT-rich Low_complexity Low_complexity 1 125 0 4 609 442 234 19 9 chr15 3255363 3255471 -100239503 - B3A SINE B2 -89 109 1 4 609 199 125 20 40 chr15 3255524 3255574 -100239400 + T-rich Low_complexity Low_complexity 6 54 0 4 609 323 307 35 91 chr15 3255574 3255771 -100239203 - L1M2 LINE L1 -2542 3601 3416 4 609 291 284 39 47 chr15 3255796 3255925 -100239049 - L1M2 LINE L1 -3867 2273 2146 4 609 206 353 74 16 chr15 3256450 3256571 -100238403 + MIRc SINE MIR 102 229 -39 4 609 1228 304 61 121 chr15 3257429 3258006 -100236968 + Tigger1 DNA MER2_type 1 542 -1876 4 609 3722 121 45 4 chr15 3258006 3258692 -100236282 - Lx4B LINE L1 -1090 5968 5252 4 609 5447 149 79 13 chr15 3258694 3259710 -100235264 + Lx4B LINE L1 5957 7039 -19 4 609 2003 283 80 18 chr15 3259897 3260560 -100234414 + Tigger1 DNA MER2_type 620 1323 -1095 4 609 486 0 0 0 chr15 3260587 3260641 -100234333 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 609 693 296 10 26 chr15 3260643 3260837 -100234137 - B3 SINE B2 -25 191 1 4 609 1288 259 39 39 chr15 3261048 3261458 -100233516 + Tigger1 DNA MER2_type 1435 1844 -574 4 609 299 269 113 54 chr15 3261464 3261649 -100233325 + Lx8 LINE L1 7215 7410 -63 4 609 1338 251 161 36 chr15 3261702 3261829 -100233145 + Tigger1 DNA MER2_type 1821 1976 -442 4 609 1807 149 80 11 chr15 3261829 3262194 -100232780 + Lx2 LINE L1 6608 6997 0 4 609 1338 251 161 36 chr15 3262194 3262594 -100232380 + Tigger1 DNA MER2_type 1977 2414 -4 4 609 549 325 78 57 chr15 3263113 3263394 -100231580 + LTR87 LTR ERVL? 122 408 -216 4 609 7543 27 0 0 chr15 3263394 3264282 -100230692 + L1_Mm LINE L1 4713 5600 -283 4 609 955 36 0 0 chr15 3264282 3264392 -100230582 + L1Md_F2 LINE L1 5477 5586 -297 4 609 8019 47 2 3 chr15 3264392 3265387 -100229587 + L1Md_F2 LINE L1 5587 6580 -2 4 609 189 0 0 0 chr15 3265854 3265875 -100229099 + (A)n Simple_repeat Simple_repeat 1 21 0 4 609 290 300 174 22 chr15 3265875 3266059 -100228915 + LTR87 LTR ERVL? 375 586 -38 4 609 772 139 0 58 chr15 3266208 3266345 -100228629 - B1_Mur4 SINE Alu -21 129 1 4 609 1009 83 15 0 chr15 3266576 3266709 -100228265 - B1_Mus1 SINE Alu -13 135 1 4 609 21 0 0 0 chr15 3266719 3266740 -100228234 + AT_rich Low_complexity Low_complexity 1 21 0 4 609 629 311 60 35 chr15 3266982 3267336 -100227638 + ORR1E LTR MaLR 4 373 -6 4 609 25 51 0 0 chr15 3268964 3269003 -100225971 + AT_rich Low_complexity Low_complexity 1 39 0 4 609 261 186 61 10 chr15 3270806 3270904 -100224070 + (CAAAC)n Simple_repeat Simple_repeat 1 103 0 4 609 22 80 0 0 chr15 3271687 3271737 -100223237 + AT_rich Low_complexity Low_complexity 1 50 0 4 609 424 294 110 28 chr15 3271833 3272015 -100222959 - B3A SINE B2 0 198 2 4 609 188 306 0 0 chr15 3272083 3272132 -100222842 + L2a LINE L2 3374 3422 -4 4 609 207 226 0 70 chr15 3272294 3272351 -100222623 - MIRb SINE MIR -64 204 152 4 609 242 277 94 47 chr15 3272730 3272836 -100222138 - MER66A LTR ERV1 -153 325 215 4 609 758 238 159 5 chr15 3272855 3273075 -100221899 - Lx6 LINE L1 -60 7400 7147 4 609 238 231 262 8 chr15 3273693 3273815 -100221159 + L1M1 LINE L1 5771 5923 -380 4 609 297 379 11 0 chr15 3274149 3274244 -100220730 + ID_B1 SINE B4 1 96 -128 4 609 232 325 12 48 chr15 3274948 3275032 -100219942 - MER81 DNA AcHobo -6 108 28 4 609 1439 134 4 12 chr15 3275367 3275609 -100219365 + Lx5 LINE L1 5716 5955 -1095 4 609 203 203 0 14 chr15 3276191 3276261 -100218713 + (TA)n Simple_repeat Simple_repeat 2 70 0 4 609 282 259 28 7 chr15 3276272 3276416 -100218558 - Lx9 LINE L1 -77 7567 7421 4 609 204 208 38 0 chr15 3276427 3276480 -100218494 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 609 321 196 29 126 chr15 3276481 3276656 -100218318 + Lx9 LINE L1 7486 7643 -1 4 76 183 42 0 0 chr15 3276780 3276804 -100218170 + (A)n Simple_repeat Simple_repeat 1 24 0 4 610 964 192 25 30 chr15 3277538 3277737 -100217237 - B3A SINE B2 0 198 1 4 610 468 51 0 0 chr15 3277911 3277970 -100217004 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 610 387 316 103 32 chr15 3278913 3279194 -100215780 + RMER15 LTR ERVL 275 575 0 4 610 697 158 85 14 chr15 3279356 3279497 -100215477 + URR1A DNA MER1_type 76 226 0 4 610 26 0 0 0 chr15 3280189 3280215 -100214759 + AT_rich Low_complexity Low_complexity 1 26 0 4 610 195 42 0 0 chr15 3280386 3280410 -100214564 + (TC)n Simple_repeat Simple_repeat 2 25 0 4 610 1293 328 98 20 chr15 3280428 3281162 -100213812 - Lx8 LINE L1 -164 7309 6519 4 610 454 306 85 9 chr15 3281166 3281390 -100213584 + L1M2 LINE L1 5536 5776 -515 4 610 373 333 63 67 chr15 3281539 3281809 -100213165 - Charlie1a DNA MER1_type -597 858 590 4 610 336 316 195 6 chr15 3282115 3282283 -100212691 - Charlie1a DNA MER1_type -1254 201 2 4 610 267 54 0 0 chr15 3283846 3283883 -100211091 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 610 4220 52 0 2 chr15 3284553 3285075 -100209899 - L1Md_F2 LINE L1 -12 6570 6050 4 610 8310 45 3 3 chr15 3285075 3286295 -100208679 + L1Md_F2 LINE L1 4816 6033 -549 4 610 483 236 45 18 chr15 3286621 3286733 -100208241 - B3 SINE B2 -4 212 98 4 610 307 239 182 0 chr15 3286815 3286908 -100208066 - PB1D10 SINE Alu -7 110 3 4 610 2002 228 27 103 chr15 3287083 3287744 -100207230 + RMER19C LTR ERVK 1 611 0 4 610 409 317 237 37 chr15 3287754 3288344 -100206630 + L2a LINE L2 2406 3111 -315 4 610 192 340 118 20 chr15 3288759 3288861 -100206113 + L2 LINE L2 2701 2812 -607 4 610 343 200 95 52 chr15 3288894 3289010 -100205964 + MIRb SINE MIR 79 199 -69 4 610 1237 81 8 20 chr15 3289143 3289394 -100205580 + (TTTTC)n Simple_repeat Simple_repeat 1 247 0 4 610 678 218 156 12 chr15 3290311 3290478 -100204496 - B3 SINE B2 -25 191 1 4 610 720 233 99 16 chr15 3290539 3290731 -100204243 - B3 SINE B2 -8 208 1 4 610 334 299 58 75 chr15 3291428 3291616 -100203358 + ORR1E LTR MaLR 64 248 -111 4 610 227 284 30 0 chr15 3291685 3291752 -100203222 + ORR1E LTR MaLR 311 379 0 4 610 787 255 75 29 chr15 3291872 3292151 -100202823 + B4A SINE B4 1 292 0 4 610 238 299 0 0 chr15 3292181 3292248 -100202726 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 610 3577 42 21 0 chr15 3292811 3293243 -100201731 + L1_Mus1 LINE L1 6127 6567 0 4 610 183 42 0 0 chr15 3293259 3293283 -100201691 + (CAA)n Simple_repeat Simple_repeat 2 25 0 4 610 714 203 28 42 chr15 3293635 3293779 -100201195 - B1_Mur3 SINE Alu -7 142 1 4 610 846 34 185 0 chr15 3294057 3294176 -100200798 + L1Md_A LINE L1 6441 6581 -1 4 610 210 37 0 0 chr15 3294203 3294230 -100200744 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 610 216 0 0 0 chr15 3295200 3295224 -100199750 + (T)n Simple_repeat Simple_repeat 1 24 0 4 610 237 65 0 0 chr15 3295851 3295882 -100199092 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 4 610 188 67 33 0 chr15 3296208 3296238 -100198736 + (ATTG)n Simple_repeat Simple_repeat 2 32 0 4 610 697 246 26 0 chr15 3296599 3296692 -100198282 + L1MA5 LINE L1 6071 6168 -132 5 610 333 0 0 0 chr15 3296692 3296729 -100198245 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 610 697 246 26 0 chr15 3296729 3296826 -100198148 + L1MA5 LINE L1 6169 6265 -35 5 610 201 346 148 37 chr15 3297060 3297249 -100197725 + L2 LINE L2 2870 3079 -340 5 610 255 175 0 0 chr15 3298192 3298249 -100196725 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 610 3071 85 0 10 chr15 3298264 3298668 -100196306 + MTB LTR MaLR 1 400 0 5 610 865 159 0 37 chr15 3298668 3298831 -100196143 + MTB-int LTR MaLR 1 157 -941 5 610 256 328 75 16 chr15 3299005 3299191 -100195783 - BLACKJACK DNA AcHobo -1179 1765 1569 5 610 241 331 34 75 chr15 3299603 3299750 -100195224 - MER5B DNA MER1_type -20 158 18 5 610 700 254 0 6 chr15 3300118 3300288 -100194686 - Lx6 LINE L1 -14 7446 7278 5 610 1030 257 63 104 chr15 3300366 3300761 -100194213 + MTE2a LTR MaLR 1 379 0 5 610 293 264 158 35 chr15 3301325 3301439 -100193535 + MER20 DNA MER1_type 1 128 -91 5 610 4596 196 34 25 chr15 3302147 3303156 -100191818 + Lx9 LINE L1 6615 7632 -12 5 610 1218 52 0 0 chr15 3303156 3303310 -100191664 + (GAAAA)n Simple_repeat Simple_repeat 2 155 0 5 610 35 24 0 0 chr15 3304321 3304363 -100190611 + AT_rich Low_complexity Low_complexity 1 42 0 5 610 439 319 79 21 chr15 3304463 3304652 -100190322 - MER20 DNA MER1_type 0 219 20 5 610 279 0 0 0 chr15 3304769 3304800 -100190174 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 610 288 267 101 37 chr15 3304939 3304971 -100190003 - B3A SINE B2 -80 118 3 5 610 360 312 0 0 chr15 3304971 3305048 -100189926 - B4 SINE B4 -213 79 3 5 610 264 359 91 52 chr15 3305120 3305352 -100189622 - MIRb SINE MIR -19 249 9 5 610 281 322 127 42 chr15 3306936 3307244 -100187730 + Charlie7 DNA MER1_type 114 447 -2165 5 610 22 35 0 0 chr15 3307608 3307637 -100187337 + AT_rich Low_complexity Low_complexity 1 29 0 5 610 274 300 0 14 chr15 3307651 3307722 -100187252 - ID4 SINE ID -5 78 9 5 610 407 308 71 109 chr15 3307940 3308360 -100186614 - MLT1A1 LTR MaLR -4 404 1 5 610 534 267 0 0 chr15 3308929 3309060 -100185914 - B1_Mur1 SINE Alu -17 132 2 5 610 313 310 31 13 chr15 3309602 3309739 -100185235 - MIRb SINE MIR -79 189 58 5 610 3064 44 10 37 chr15 3310646 3311047 -100183927 + RLTR10 LTR ERVK 1 390 0 5 610 7359 28 9 49 chr15 3311057 3312049 -100182925 + RLTR10-int LTR ERVK 41 992 -995 5 610 285 281 39 15 chr15 3312120 3312250 -100182724 + RLTR10-int LTR ERVK 1462 1594 -5987 5 610 8349 17 2 1 chr15 3312333 3313325 -100181649 + RLTR10-int LTR ERVK 992 1984 -3 5 610 3035 44 10 38 chr15 3313327 3313726 -100181248 + RLTR10 LTR ERVK 1 388 -2 5 610 483 18 0 0 chr15 3314043 3314099 -100180875 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 610 682 75 2 4 chr15 3314209 3314324 -100180650 - B2_Mm2 SINE B2 -78 115 2 5 610 27 29 0 0 chr15 3316016 3316050 -100178924 + AT_rich Low_complexity Low_complexity 1 34 0 5 610 336 308 159 18 chr15 3316067 3316401 -100178573 - L1MA4A LINE L1 -385 5918 5538 5 610 288 0 0 0 chr15 3316430 3316462 -100178512 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 610 252 0 0 0 chr15 3316462 3316489 -100178485 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 610 392 0 21 0 chr15 3316491 3316539 -100178435 + (GA)n Simple_repeat Simple_repeat 1 49 0 5 610 2980 178 108 12 chr15 3316645 3317238 -100177736 + RLTR25B LTR ERVK 1 650 -378 5 610 22 0 0 0 chr15 3317617 3317639 -100177335 + AT_rich Low_complexity Low_complexity 1 22 0 5 610 273 315 0 27 chr15 3318090 3318165 -100176809 - B3A SINE B2 -38 160 88 5 610 581 0 14 0 chr15 3318213 3318282 -100176692 + (TTTC)n Simple_repeat Simple_repeat 3 72 0 5 610 345 278 115 31 chr15 3318283 3318413 -100176561 - B1_Mur1 SINE Alu -7 142 2 5 610 23 33 0 0 chr15 3319412 3319442 -100175532 + AT_rich Low_complexity Low_complexity 1 30 0 5 610 310 244 171 13 chr15 3319637 3319795 -100175179 - L1MA4A LINE L1 -374 5929 5747 5 610 195 42 0 0 chr15 3319829 3319853 -100175121 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 5 610 2341 111 3 3 chr15 3319879 3320205 -100174769 + IAPEY2_LTR LTR ERVK 32 357 0 5 610 544 207 57 45 chr15 3320205 3320362 -100174612 + IAPLTR4_I LTR ERVK 22 180 -1290 5 610 13030 150 8 27 chr15 3320361 3322563 -100172411 + IAPEY3-int LTR ERVK 524 2684 -4996 5 610 3034 66 91 0 chr15 3322566 3323157 -100171817 + IAPEY3-int LTR ERVK 4857 5501 -2179 5 610 4204 76 71 0 chr15 3323153 3323748 -100171226 + IAPEY3-int LTR ERVK 7044 7680 0 5 610 2475 60 3 3 chr15 3323758 3324076 -100170898 + IAPEY2_LTR LTR ERVK 32 349 -8 5 610 467 216 14 54 chr15 3324077 3324258 -100170716 - L1MA4 LINE L1 -393 5907 5732 5 610 195 42 0 0 chr15 3324276 3324300 -100170674 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 5 610 253 260 178 16 chr15 3324499 3324628 -100170346 - MIRc SINE MIR -89 179 30 5 610 181 204 39 58 chr15 3325426 3325478 -100169496 + L4 LINE RTE 996 1046 -983 5 610 528 304 54 51 chr15 3326982 3327277 -100167697 - Lx8 LINE L1 -1 7472 7177 5 610 183 194 28 0 chr15 3327472 3327508 -100167466 - MIRb SINE MIR -38 230 194 5 610 247 172 35 0 chr15 3328446 3328504 -100166470 - Lx6 LINE L1 -42 7418 7359 5 610 269 248 154 29 chr15 3329062 3329166 -100165808 - MER58A DNA MER1_type -107 117 1 5 610 350 339 29 41 chr15 3329400 3329572 -100165402 + L1M4 LINE L1 4909 5078 -1068 5 610 1374 65 43 0 chr15 3329576 3329761 -100165213 - B2_Mm1t SINE B2 0 193 1 5 610 207 69 0 0 chr15 3330155 3330184 -100164790 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 610 1162 102 11 28 chr15 3330609 3330791 -100164183 + B2_Mm1t SINE B2 9 187 -6 5 610 525 301 0 0 chr15 3331171 3331294 -100163680 - ID_B1 SINE B4 0 224 102 5 610 266 380 29 14 chr15 3331294 3331309 -100163665 - B1_Mus1 SINE Alu -1 146 7 5 610 1046 172 133 145 chr15 3331826 3331945 -100163029 - Lx7 LINE L1 0 7696 7528 5 610 195 42 0 0 chr15 3331945 3331969 -100163005 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 5 610 1046 172 133 145 chr15 3331969 3332352 -100162622 - Lx7 LINE L1 -169 7527 7200 5 610 25 51 0 0 chr15 3332364 3332403 -100162571 + AT_rich Low_complexity Low_complexity 1 39 0 5 610 7197 77 9 1 chr15 3332588 3333863 -100161111 - L1_Mus1 LINE L1 0 6567 5278 5 610 1257 319 120 12 chr15 3334574 3335216 -100159758 + Lx8 LINE L1 6758 7468 -5 5 610 764 176 39 12 chr15 3335571 3335717 -100159257 + B3 SINE B2 1 139 -56 5 610 245 345 55 92 chr15 3335805 3335968 -100159006 + MTEa LTR MaLR 22 178 -201 5 610 378 314 179 68 chr15 3335846 3336226 -100158748 + MLT2B5 LTR ERVL 81 502 -99 5 610 311 121 17 0 chr15 3336226 3336284 -100158690 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 5 610 349 310 0 0 chr15 3336373 3336460 -100158514 + MTE2b LTR MaLR 1 87 -292 5 610 22 0 0 0 chr15 3339036 3339058 -100155916 + AT_rich Low_complexity Low_complexity 1 22 0 5 610 913 358 36 17 chr15 3339395 3339756 -100155218 + MER21B LTR ERV1 1 368 -495 5 610 311 290 72 133 chr15 3339783 3340156 -100154818 + MTEb LTR MaLR 1 361 -18 5 610 390 257 69 26 chr15 3340178 3340294 -100154680 + MER21B LTR ERV1 447 567 -296 5 610 427 258 76 23 chr15 3340363 3340494 -100154480 + MER21B LTR ERV1 587 724 -139 5 610 2053 182 8 41 chr15 3341047 3341353 -100153621 + L1_Mur1 LINE L1 869 1174 -5810 5 610 465 101 29 48 chr15 3341353 3341457 -100153517 + L1_Mus1 LINE L1 6465 6566 -1 5 610 3358 187 10 119 chr15 3341457 3342201 -100152773 + L1_Mur1 LINE L1 1175 1765 -4115 5 610 7787 63 0 2 chr15 3342201 3343187 -100151787 + L1Md_F2 LINE L1 5587 6570 -12 5 610 3358 188 11 145 chr15 3343187 3343661 -100151313 + L1_Mur1 LINE L1 1766 2221 -3659 5 610 316 186 134 17 chr15 3343661 3343786 -100151188 + Lx4B LINE L1 6869 7051 -7 5 610 315 0 0 0 chr15 3344618 3344653 -100150321 + (TTA)n Simple_repeat Simple_repeat 2 36 0 5 610 222 91 0 0 chr15 3344677 3344710 -100150264 + (TC)n Simple_repeat Simple_repeat 1 33 0 5 610 342 0 0 0 chr15 3344710 3344748 -100150226 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 610 733 279 38 0 chr15 3344748 3344906 -100150068 - B3 SINE B2 -51 165 2 5 610 213 114 0 28 chr15 3345249 3345285 -100149689 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 610 509 184 34 0 chr15 3345393 3345540 -100149434 + GA-rich Low_complexity Low_complexity 3 154 0 5 610 203 262 175 0 chr15 3346716 3346796 -100148178 + MIRb SINE MIR 117 210 -58 5 610 278 300 10 20 chr15 3348050 3348152 -100146822 - MIRb SINE MIR -15 253 153 5 610 730 204 67 91 chr15 3352382 3352592 -100142382 - B3 SINE B2 -10 206 2 5 610 225 0 0 0 chr15 3352842 3352867 -100142107 + (TC)n Simple_repeat Simple_repeat 1 25 0 5 610 239 355 129 41 chr15 3354202 3354309 -100140665 + L2 LINE L2 2113 2220 -1199 5 610 209 33 33 0 chr15 3354309 3354339 -100140635 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 610 239 355 129 41 chr15 3354339 3354666 -100140308 + L2 LINE L2 2221 2585 -834 5 610 271 336 64 7 chr15 3354843 3354984 -100139990 + L2 LINE L2 2804 2952 -467 5 610 273 364 17 0 chr15 3355624 3355742 -100139232 + MLT1K LTR MaLR 451 570 -25 5 610 2242 40 14 0 chr15 3356428 3356704 -100138270 + L1Md_F3 LINE L1 6303 6582 -2 5 610 2214 175 30 2 chr15 3357270 3357666 -100137308 - MTC LTR MaLR -12 409 3 5 610 186 43 0 0 chr15 3358203 3358226 -100136748 + (TTA)n Simple_repeat Simple_repeat 2 24 0 5 610 1101 85 33 0 chr15 3358227 3358380 -100136594 - B2_Mm2 SINE B2 -37 158 1 5 610 234 250 14 14 chr15 3359220 3359293 -100135681 - MamGypLTR1a LTR Gypsy -711 73 1 5 610 617 208 0 6 chr15 3359452 3359631 -100135343 + (CA)n Simple_repeat Simple_repeat 2 179 0 5 610 430 243 9 0 chr15 3359692 3359799 -100135175 + MER5A1 DNA MER1_type 56 163 -3 5 610 194 116 23 0 chr15 3359890 3359933 -100135041 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 5 610 494 164 88 55 chr15 3360813 3360994 -100133980 - Lx9 LINE L1 0 7644 7458 5 610 483 168 0 0 chr15 3360995 3361090 -100133884 + (CATA)n Simple_repeat Simple_repeat 2 96 0 5 610 288 77 0 0 chr15 3361129 3361168 -100133806 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 5 610 4020 75 0 4 chr15 3361922 3362444 -100132530 + L1_Mus1 LINE L1 6048 6567 0 5 610 298 372 91 7 chr15 3362548 3362733 -100132241 + B4 SINE B4 1 201 -91 6 610 1023 71 19 0 chr15 3362733 3362887 -100132087 + (TC)n Simple_repeat Simple_repeat 1 157 0 6 610 342 0 0 0 chr15 3362891 3362929 -100132045 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 610 592 243 20 27 chr15 3363011 3363159 -100131815 + B1_Mur2 SINE Alu 3 149 0 6 610 293 148 12 0 chr15 3363162 3363243 -100131731 + A-rich Low_complexity Low_complexity 3 84 0 6 610 327 104 0 0 chr15 3363442 3363490 -100131484 + (T)n Simple_repeat Simple_repeat 1 48 0 6 610 23 0 0 0 chr15 3363737 3363760 -100131214 + AT_rich Low_complexity Low_complexity 1 23 0 6 610 24 53 0 0 chr15 3365320 3365358 -100129616 + AT_rich Low_complexity Low_complexity 1 38 0 6 610 565 62 21 10 chr15 3365534 3365631 -100129343 - Lx LINE L1 0 6654 6557 6 610 220 39 0 0 chr15 3366258 3366284 -100128690 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 610 387 141 0 0 chr15 3366284 3366348 -100128626 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 610 276 30 0 0 chr15 3366341 3366374 -100128600 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 610 207 0 0 0 chr15 3367052 3367075 -100127899 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 610 445 356 73 103 chr15 3367194 3367670 -100127304 + LTR16B2 LTR ERVL 1 462 0 6 610 308 234 95 61 chr15 3368150 3368294 -100126680 + MLT1A1 LTR MaLR 194 392 -16 6 610 1131 126 126 0 chr15 3368329 3368527 -100126447 - URR1A DNA MER1_type -1 225 3 6 610 6018 167 15 22 chr15 3368944 3370057 -100124917 + MERVL_2A-int LTR ERVL 3715 4820 -941 6 610 24 32 0 0 chr15 3370598 3370629 -100124345 + AT_rich Low_complexity Low_complexity 1 31 0 6 610 418 355 7 14 chr15 3370654 3370794 -100124180 + LTR33 LTR ERVL 16 154 -361 6 610 207 0 0 0 chr15 3371088 3371111 -100123863 + (AATAG)n Simple_repeat Simple_repeat 3 25 0 6 610 259 203 16 48 chr15 3371880 3371942 -100123032 - Charlie9 DNA MER1_type 0 2757 2698 6 610 232 407 28 0 chr15 3373016 3373198 -100121776 + L1M3de LINE L1 964 1150 -5503 6 610 677 360 78 17 chr15 3373535 3374166 -100120808 + L1M3de LINE L1 1206 1874 -4779 6 610 346 297 33 0 chr15 3374175 3374266 -100120708 + RSINE1 SINE B4 68 161 -4 6 610 376 161 12 12 chr15 3374379 3374461 -100120513 + (TA)n Simple_repeat Simple_repeat 2 83 0 6 610 403 289 17 126 chr15 3374511 3374578 -100120396 + B1_Mur1 SINE Alu 1 69 -80 6 610 2883 34 0 6 chr15 3374578 3374933 -100120041 - L1Md_F3 LINE L1 -1 6583 6231 6 610 403 289 17 126 chr15 3374933 3374984 -100119990 + B1_Mur1 SINE Alu 70 106 -43 6 610 280 302 93 21 chr15 3375852 3376065 -100118909 + LTR16A LTR ERVL 174 450 -1 6 610 234 404 90 32 chr15 3376084 3376240 -100118734 - MamRep38 DNA hAT -57 238 74 6 610 361 302 81 124 chr15 3376313 3376596 -100118378 - MER102b DNA MER1_type -68 273 3 6 610 659 281 65 27 chr15 3378351 3378549 -100116425 + MER63D DNA AcHobo 2 209 -852 6 610 418 160 0 39 chr15 3378549 3378653 -100116321 - L1Md_F2 LINE L1 0 6582 6483 6 610 659 281 65 27 chr15 3378653 3378747 -100116227 + MER63D DNA AcHobo 210 305 -756 6 610 365 314 18 61 chr15 3380159 3380322 -100114652 + Charlie1 DNA MER1_type 55 210 -2571 6 610 1002 300 25 14 chr15 3381016 3381297 -100113677 + B4A SINE B4 1 284 -8 6 610 276 30 0 0 chr15 3381312 3381345 -100113629 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 610 432 0 0 0 chr15 3381345 3381392 -100113582 + (GA)n Simple_repeat Simple_repeat 2 49 0 6 610 422 154 22 0 chr15 3382614 3382705 -100112269 + (CAGAGA)n Simple_repeat Simple_repeat 4 96 0 6 610 800 194 95 48 chr15 3385241 3385430 -100109544 - B3A SINE B2 0 198 1 6 610 265 412 57 40 chr15 3385690 3385986 -100108988 + L3 LINE CR1 3134 3434 -1055 6 610 209 139 23 0 chr15 3386949 3386992 -100107982 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 6 610 300 143 0 0 chr15 3386990 3387046 -100107928 + (TCCC)n Simple_repeat Simple_repeat 2 57 0 6 610 352 275 166 47 chr15 3387910 3388211 -100106763 - Lx9 LINE L1 -2 7642 7306 6 610 427 221 118 24 chr15 3388545 3388721 -100106253 - MIR SINE MIR -26 242 44 6 610 180 0 0 0 chr15 3389132 3389152 -100105822 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 6 610 1197 93 0 0 chr15 3389152 3389313 -100105661 - B2_Mm2 SINE B2 -33 162 2 6 610 1134 66 0 0 chr15 3389792 3389929 -100105045 + B1_Mm SINE Alu 1 137 -10 6 610 216 86 0 0 chr15 3389929 3389964 -100105010 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 610 789 232 45 20 chr15 3390138 3390340 -100104634 + B3 SINE B2 1 207 -9 6 610 773 39 0 250 chr15 3390789 3390993 -100103981 + L1Md_F2 LINE L1 6417 6569 -13 6 610 253 234 9 9 chr15 3391999 3392111 -100102863 + (CA)n Simple_repeat Simple_repeat 1 112 0 6 610 590 113 9 0 chr15 3392138 3392253 -100102721 + (CA)n Simple_repeat Simple_repeat 2 117 0 6 610 504 0 0 0 chr15 3393299 3393355 -100101619 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 6 610 369 0 0 0 chr15 3393533 3393574 -100101400 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 610 327 307 199 7 chr15 3393723 3393874 -100101100 - MER2 DNA MER2_type -3 342 163 6 610 262 320 0 0 chr15 3393957 3394032 -100100942 + BC1_Mm scRNA scRNA 17 91 -61 6 610 378 0 0 0 chr15 3394942 3394984 -100099990 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 610 404 309 57 67 chr15 3395824 3396018 -100098956 + MER20 DNA MER1_type 27 218 -1 6 610 240 369 42 70 chr15 3396696 3396839 -100098135 - Charlie15a DNA MER1_type -29 195 57 6 610 700 303 97 61 chr15 3396994 3397080 -100097894 + B4 SINE B4 1 81 -211 6 610 543 142 38 0 chr15 3397080 3397186 -100097788 + Lx9 LINE L1 7534 7643 -1 6 610 700 303 97 61 chr15 3397186 3397377 -100097597 + B4 SINE B4 82 288 -4 6 610 423 56 0 0 chr15 3397383 3397437 -100097537 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 610 204 256 185 37 chr15 3397725 3397806 -100097168 + MIR3 SINE MIR 86 178 -30 6 610 1195 169 0 102 chr15 3398172 3398416 -100096558 + URR1B DNA MER1_type 6 224 -1 6 610 219 152 0 0 chr15 3400657 3400703 -100094271 + (TGG)n Simple_repeat Simple_repeat 2 47 0 6 610 468 0 0 0 chr15 3401797 3401849 -100093125 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 6 610 306 0 0 0 chr15 3401873 3401907 -100093067 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 6 610 311 60 0 20 chr15 3402899 3402950 -100092024 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 610 24 0 0 0 chr15 3404143 3404167 -100090807 + AT_rich Low_complexity Low_complexity 1 24 0 6 610 207 146 0 0 chr15 3404374 3404415 -100090559 + (A)n Simple_repeat Simple_repeat 1 41 0 6 610 2547 69 6 6 chr15 3404426 3404777 -100090197 + L1_Mus3 LINE L1 6284 6634 -4 6 610 315 0 0 0 chr15 3404982 3405017 -100089957 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 610 363 293 109 54 chr15 3405057 3405099 -100089875 - MT2B2 LTR ERVL -221 363 170 6 610 1094 70 0 0 chr15 3405099 3405241 -100089733 - B1_Mm SINE Alu 0 147 6 6 610 333 185 43 65 chr15 3405139 3405278 -100089696 - ORR1B1-int LTR MaLR -755 754 619 6 610 288 130 0 0 chr15 3405326 3405372 -100089602 + (A)n Simple_repeat Simple_repeat 1 46 0 6 610 316 273 85 85 chr15 3405650 3405814 -100089160 + L1ME1 LINE L1 5838 6001 -178 6 610 2832 89 39 2 chr15 3406150 3406565 -100088409 + L1_Mus3 LINE L1 6209 6638 0 6 611 30 0 0 0 chr15 3408396 3408426 -100086548 + AT_rich Low_complexity Low_complexity 1 30 0 6 611 968 86 0 7 chr15 3408984 3409125 -100085849 + (TTTTC)n Simple_repeat Simple_repeat 5 144 0 6 611 387 0 0 0 chr15 3410251 3410294 -100084680 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 611 416 277 24 59 chr15 3412861 3413030 -100081944 - RSINE1 SINE B4 0 165 3 6 611 363 239 31 19 chr15 3413190 3413352 -100081622 + (TA)n Simple_repeat Simple_repeat 2 165 0 6 611 219 69 0 0 chr15 3413602 3413631 -100081343 + (CCCTAA)n Simple_repeat Simple_repeat 2 30 0 6 611 225 0 0 0 chr15 3413857 3413882 -100081092 + (A)n Simple_repeat Simple_repeat 1 25 0 6 611 293 273 59 29 chr15 3413968 3414070 -100080904 + Charlie5 DNA MER1_type 27 131 -2493 6 611 692 276 134 6 chr15 3414071 3414392 -100080582 + Charlie5 DNA MER1_type 2263 2624 0 6 611 324 336 34 8 chr15 3414710 3414827 -100080147 - MER63B DNA AcHobo -25 411 292 6 611 1132 141 6 0 chr15 3415859 3416036 -100078938 + URR1A DNA MER1_type 49 226 0 6 611 213 39 0 0 chr15 3416305 3416331 -100078643 + (TATAA)n Simple_repeat Simple_repeat 1 26 0 6 611 986 176 138 7 chr15 3416333 3416602 -100078372 - Lx9 LINE L1 -38 7606 7303 6 611 789 160 231 6 chr15 3417699 3417881 -100077093 + URR1A DNA MER1_type 1 223 -3 6 611 21 0 0 0 chr15 3417947 3417968 -100077006 + AT_rich Low_complexity Low_complexity 1 21 0 6 611 207 235 0 0 chr15 3418215 3418266 -100076708 + GA-rich Low_complexity Low_complexity 2 52 0 6 611 528 274 129 15 chr15 3418479 3418755 -100076219 - Lx7 LINE L1 -373 5927 5590 6 611 346 175 44 0 chr15 3418760 3418874 -100076100 + CT-rich Low_complexity Low_complexity 2 120 0 6 611 325 272 37 46 chr15 3418892 3419000 -100075974 - ID_B1 SINE B4 0 224 118 6 611 806 313 124 51 chr15 3419176 3419701 -100075273 + MLT1E3 LTR MaLR 62 624 0 6 611 733 196 58 0 chr15 3421827 3421965 -100073009 - B1_Mur4 SINE Alu -2 148 3 6 611 379 242 9 57 chr15 3422360 3422465 -100072509 - PB1D10 SINE Alu -13 104 5 6 611 333 0 0 0 chr15 3423308 3423345 -100071629 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 611 380 108 46 0 chr15 3423779 3423844 -100071130 - L1_Mm LINE L1 -557 5326 5259 6 611 3496 66 4 15 chr15 3423844 3424015 -100070959 + L1_Mus1 LINE L1 6111 6281 -286 6 611 3335 64 77 0 chr15 3424015 3424455 -100070519 + MT2C_Mm LTR ERVL 1 474 -1 6 611 3496 66 4 15 chr15 3424455 3424745 -100070229 + L1_Mus1 LINE L1 6282 6567 0 6 611 200 135 27 0 chr15 3425513 3425550 -100069424 + T-rich Low_complexity Low_complexity 5 42 0 7 611 2795 134 33 2 chr15 3426828 3427277 -100067697 + Lx LINE L1 6186 6648 -6 7 611 794 148 146 69 chr15 3427681 3427942 -100067032 + RMER1A Other Other 750 1030 0 7 611 23209 21 1 0 chr15 3427937 3430789 -100064185 + L1Md_T LINE L1 2732 5586 -297 7 611 8910 6 2 2 chr15 3430789 3431805 -100063169 + L1Md_T LINE L1 5587 6582 0 7 611 410 297 38 59 chr15 3432007 3432193 -100062781 + L2 LINE L2 2819 3000 -419 7 611 527 240 215 15 chr15 3433127 3433322 -100061652 + Lx6 LINE L1 7227 7460 0 7 611 459 0 0 0 chr15 3434419 3434470 -100060504 + (TA)n Simple_repeat Simple_repeat 1 51 0 7 611 725 271 22 50 chr15 3436253 3436264 -100058710 - B3A SINE B2 -24 174 165 7 611 435 83 0 0 chr15 3436264 3436324 -100058650 + (TG)n Simple_repeat Simple_repeat 2 61 0 7 611 725 271 22 50 chr15 3436324 3436491 -100058483 - B3A SINE B2 -34 164 1 7 611 190 308 15 30 chr15 3436913 3436980 -100057994 - MIR SINE MIR -107 101 36 7 611 238 265 103 46 chr15 3439387 3439474 -100055500 - MIRb SINE MIR -164 104 6 7 611 276 149 0 0 chr15 3439866 3439913 -100055061 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 7 611 3444 68 9 0 chr15 3440481 3440920 -100054054 + L1_Mus1 LINE L1 6121 6563 -4 7 611 189 0 0 0 chr15 3441190 3441211 -100053763 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 7 611 1883 279 90 12 chr15 3441849 3442427 -100052547 + MTE-int LTR MaLR 30 652 -928 7 611 523 296 24 80 chr15 3442562 3442775 -100052199 + MTE-int LTR MaLR 662 862 -718 7 611 590 274 121 73 chr15 3442749 3443079 -100051895 + ORR1E LTR MaLR 12 357 -2 7 611 270 0 0 0 chr15 3444192 3444222 -100050752 + (TA)n Simple_repeat Simple_repeat 2 31 0 7 611 206 53 79 0 chr15 3445500 3445538 -100049436 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 7 611 233 295 115 0 chr15 3445748 3445826 -100049148 + Tigger9a DNA Tigger 5 91 -641 7 611 824 139 188 97 chr15 3446215 3446422 -100048552 - URR1A DNA MER1_type 0 226 1 7 611 428 330 177 12 chr15 3446615 3446943 -100048031 - L2 LINE L2 -676 2743 2362 7 611 241 218 26 0 chr15 3447157 3447235 -100047739 + GA-rich Low_complexity Low_complexity 2 81 0 7 611 646 331 125 52 chr15 3447488 3448161 -100046813 - L2 LINE L2 -1510 1909 1188 7 611 634 267 35 35 chr15 3448340 3448538 -100046436 - B3A SINE B2 0 198 1 7 611 274 156 31 0 chr15 3449122 3449186 -100045788 + CT-rich Low_complexity Low_complexity 2 67 0 7 611 226 291 0 0 chr15 3449462 3449517 -100045457 + LTR33A_ LTR ERVL 316 370 -161 7 611 324 0 0 0 chr15 3450484 3450520 -100044454 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 611 22 0 0 0 chr15 3451503 3451525 -100043449 + AT_rich Low_complexity Low_complexity 1 22 0 7 611 2209 217 48 94 chr15 3452334 3453076 -100041898 + Lx7 LINE L1 6979 7686 -10 7 611 1474 108 121 0 chr15 3453077 3453317 -100041657 - Lx2A LINE L1 -4 7004 6736 7 611 1986 107 3 40 chr15 3453317 3453638 -100041336 + Lx2A LINE L1 6244 6552 -456 7 611 181 410 10 62 chr15 3454383 3454591 -100040383 + L2a LINE L2 3072 3268 -158 7 611 288 111 0 0 chr15 3455304 3455349 -100039625 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 611 197 305 0 0 chr15 3455911 3455970 -100039004 + MIR3 SINE MIR 111 169 -39 7 611 397 258 0 33 chr15 3455997 3456089 -100038885 - PB1D10 SINE Alu -10 107 19 7 611 388 275 62 56 chr15 3456429 3456591 -100038383 + MER20 DNA MER1_type 54 216 -3 7 611 2421 146 10 0 chr15 3457279 3457669 -100037305 + ORR1B1 LTR MaLR 1 394 0 7 611 200 316 19 78 chr15 3457960 3458063 -100036911 - MIRb SINE MIR -11 257 161 7 611 240 35 0 0 chr15 3458602 3458631 -100036343 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 611 1019 23 23 0 chr15 3458874 3459002 -100035972 + (GGAGAA)n Simple_repeat Simple_repeat 2 132 0 7 611 315 0 0 0 chr15 3459673 3459708 -100035266 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 611 273 362 138 0 chr15 3459849 3459965 -100035009 + MLT1L LTR MaLR 306 437 -173 7 611 198 246 69 42 chr15 3460045 3460117 -100034857 + MIRc SINE MIR 150 223 -45 7 611 306 319 131 40 chr15 3461789 3461988 -100032986 - MIR SINE MIR -40 222 6 7 611 306 311 50 67 chr15 3462118 3462297 -100032677 + L1MC5 LINE L1 7319 7494 -467 7 611 324 321 237 36 chr15 3462339 3462648 -100032326 + L1MC5 LINE L1 7496 7866 -95 7 611 346 333 25 42 chr15 3463550 3463669 -100031305 - PB1D10 SINE Alu 0 117 1 7 611 234 288 0 40 chr15 3464805 3464881 -100030093 + CT-rich Low_complexity Low_complexity 3 75 0 7 611 20244 99 168 2 chr15 3465446 3470807 -100024167 - L1_Mus1 LINE L1 0 6567 392 7 611 722 227 28 0 chr15 3471200 3471341 -100023633 + RSINE1 SINE B4 5 149 -16 7 611 254 29 0 28 chr15 3472968 3473004 -100021970 + (TTA)n Simple_repeat Simple_repeat 1 35 0 7 611 617 323 87 26 chr15 3473015 3473244 -100021730 + B4A SINE B4 2 244 -48 7 611 305 379 27 20 chr15 3473244 3473392 -100021582 + HAL1-3A_ME LINE L1 2291 2439 -419 7 611 247 224 18 27 chr15 3473392 3473502 -100021472 + GA-rich Low_complexity Low_complexity 1 109 0 7 611 1304 57 2 42 chr15 3473504 3473909 -100021065 + (GGGAA)n Simple_repeat Simple_repeat 1 388 0 7 611 1163 131 16 5 chr15 3474621 3474805 -100020169 + B2_Mm2 SINE B2 4 189 -6 7 611 3302 134 31 11 chr15 3475135 3475745 -100019229 - Lx5 LINE L1 -1950 3927 3306 7 611 7240 138 49 16 chr15 3475744 3477133 -100017841 + Lx5 LINE L1 3929 5363 -514 7 611 4761 66 8 6 chr15 3477137 3477794 -100017180 - L1Md_F2 LINE L1 0 5883 5226 7 611 5110 83 7 1 chr15 3477796 3478487 -100016487 + L1Md_F2 LINE L1 5877 6571 -11 7 611 243 61 0 0 chr15 3478501 3478534 -100016440 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 7 611 7120 175 33 14 chr15 3478566 3480219 -100014755 + Lx5 LINE L1 5350 7050 0 7 611 293 258 32 0 chr15 3481235 3481297 -100013677 + ID4_ SINE ID 14 77 -6 7 611 276 48 81 23 chr15 3481499 3481585 -100013389 + (TA)n Simple_repeat Simple_repeat 1 91 0 7 611 236 45 88 15 chr15 3481636 3481704 -100013270 + (TA)n Simple_repeat Simple_repeat 1 73 0 7 611 330 280 75 57 chr15 3482219 3482325 -100012649 + B1F SINE Alu 1 108 -41 7 611 425 148 0 12 chr15 3482326 3482408 -100012566 + GA-rich Low_complexity Low_complexity 4 84 0 7 611 32 26 0 0 chr15 3482675 3482714 -100012260 + AT_rich Low_complexity Low_complexity 1 39 0 7 611 23 0 0 0 chr15 3483285 3483308 -100011666 + AT_rich Low_complexity Low_complexity 1 23 0 7 611 893 45 0 0 chr15 3483501 3483613 -100011361 + B1_Mus2 SINE Alu 36 147 0 7 611 623 211 148 100 chr15 3483782 3483958 -100011016 + RMER17C-int LTR ERVK 2627 2802 -436 7 611 923 60 37 0 chr15 3483958 3484092 -100010882 - L1Md_A LINE L1 0 6582 6444 7 611 623 243 340 69 chr15 3484092 3484381 -100010593 + RMER17C-int LTR ERVK 2803 3179 -59 7 611 1496 217 36 84 chr15 3484407 3484824 -100010150 + RMER10B LTR ERVL 2 398 0 7 611 21 0 0 0 chr15 3485086 3485107 -100009867 + AT_rich Low_complexity Low_complexity 1 21 0 7 611 343 350 14 151 chr15 3485233 3485445 -100009529 + MER5A DNA MER1_type 1 183 -6 7 611 21 36 0 0 chr15 3486547 3486575 -100008399 + AT_rich Low_complexity Low_complexity 1 28 0 7 611 349 158 33 119 chr15 3487457 3487608 -100007366 + Lx4A LINE L1 6916 7053 -5 7 611 189 74 0 0 chr15 3487608 3487635 -100007339 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 7 611 22 0 0 0 chr15 3487692 3487714 -100007260 + AT_rich Low_complexity Low_complexity 1 22 0 7 611 264 303 22 11 chr15 3487735 3487825 -100007149 + MTD LTR MaLR 239 329 -90 7 611 418 108 0 26 chr15 3487825 3487901 -100007073 - L1Md_F2 LINE L1 -11 6571 6498 7 611 2841 51 0 0 chr15 3487911 3488265 -100006709 - L1Md_F3 LINE L1 -14 6570 6217 7 611 15377 48 3 0 chr15 3488265 3490278 -100004696 + L1_Mm LINE L1 3158 5176 -707 7 611 346 195 107 7 chr15 3490278 3490390 -100004584 + MTD LTR MaLR 255 419 0 7 611 558 248 28 35 chr15 3490390 3490524 -100004450 - MTD LTR MaLR -95 324 192 7 611 465 133 0 0 chr15 3490524 3490599 -100004375 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 7 611 520 271 47 90 chr15 3490602 3490622 -100004352 - MTD LTR MaLR -186 214 196 7 611 1094 101 0 0 chr15 3490622 3490770 -100004204 - B1_Mus1 SINE Alu 0 148 1 7 611 884 225 53 6 chr15 3490770 3490960 -100004014 - MTD LTR MaLR -210 209 13 7 611 205 83 0 59 chr15 3490960 3491011 -100003963 + (CAAAAA)n Simple_repeat Simple_repeat 2 49 0 7 611 849 255 196 18 chr15 3491398 3491729 -100003245 + Tigger7 DNA MER2_type 26 415 -2076 7 611 228 35 0 0 chr15 3491730 3491759 -100003215 + (GGAAA)n Simple_repeat Simple_repeat 5 33 0 7 611 696 83 0 0 chr15 3491760 3491856 -100003118 + (GGGGA)n Simple_repeat Simple_repeat 5 100 0 7 611 826 149 0 72 chr15 3491865 3492327 -100002647 + GA-rich Low_complexity Low_complexity 1 428 0 7 611 430 243 60 60 chr15 3492331 3492515 -100002459 + Tigger7 DNA MER2_type 424 607 -1884 7 611 21 0 0 0 chr15 3493463 3493484 -100001490 + AT_rich Low_complexity Low_complexity 1 21 0 7 611 709 143 18 0 chr15 3493962 3494074 -100000900 - PB1D9 SINE Alu -2 118 5 7 611 570 294 77 14 chr15 3495221 3495442 -99999532 + MER2 DNA MER2_type 86 320 -25 7 611 213 206 156 52 chr15 3495547 3495569 -99999405 + B4A SINE B4 2 30 -262 7 611 1264 189 0 13 chr15 3495569 3495794 -99999180 + URR1B DNA MER1_type 1 222 -3 7 611 213 206 156 52 chr15 3495794 3495848 -99999126 + B4A SINE B4 31 86 -206 7 611 1317 249 92 3 chr15 3496541 3496879 -99998095 - ORR1D2 LTR MaLR 0 370 3 7 611 230 175 0 0 chr15 3496969 3497009 -99997965 + A-rich Low_complexity Low_complexity 1 40 0 7 611 2602 36 2 230 chr15 3497928 3498428 -99996546 + RLTR10 LTR ERVK 1 386 -4 7 611 3833 40 26 0 chr15 3498444 3499298 -99995676 + RLTR10-int LTR ERVK 41 992 -995 7 611 294 276 31 43 chr15 3499342 3499505 -99995469 + RLTR10-int LTR ERVK 1434 1594 -5987 7 611 3359 29 5 0 chr15 3499587 3500000 -99994974 + RLTR10-int LTR ERVK 990 1404 -583 7 611 4886 17 0 7 chr15 3500000 3500584 -99994390 + RLTR10-int LTR ERVK 1405 1984 -3 1 611 2602 36 2 230 chr15 3500586 3501086 -99993888 + RLTR10 LTR ERVK 1 386 -4 1 611 22 0 0 0 chr15 3501985 3502007 -99992967 + AT_rich Low_complexity Low_complexity 1 22 0 2 611 2410 196 48 18 chr15 3502052 3502617 -99992357 - L1_Mur3 LINE L1 -11 5869 5288 3 611 1529 244 19 14 chr15 3502653 3503015 -99991959 + Lx6 LINE L1 6854 7217 -243 4 611 9298 129 17 2 chr15 3503015 3505435 -99989539 - L1_Mus4 LINE L1 0 6636 4178 5 611 766 210 9 74 chr15 3505435 3505666 -99989308 + Lx7 LINE L1 7481 7696 0 6 611 3406 147 31 17 chr15 3505708 3506290 -99988684 + Lx LINE L1 6063 6652 -2 7 611 1220 299 27 29 chr15 3506344 3506758 -99988216 + Lx5 LINE L1 6635 7047 -3 8 611 194 128 43 0 chr15 3507719 3507766 -99987208 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 9 611 354 194 0 0 chr15 3507784 3507856 -99987118 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 611 560 320 38 48 chr15 3507952 3508244 -99986730 + B4A SINE B4 2 290 -2 1 611 181 342 68 0 chr15 3509001 3509074 -99985900 - L2b LINE L2 -77 3298 3221 1 611 2231 158 18 8 chr15 3509841 3510231 -99984743 - ORR1B1 LTR MaLR 0 394 1 1 611 22 35 0 0 chr15 3511047 3511076 -99983898 + AT_rich Low_complexity Low_complexity 1 29 0 1 611 279 79 0 0 chr15 3511498 3511536 -99983438 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 611 356 352 50 105 chr15 3512073 3512155 -99982819 + ORR1E LTR MaLR 1 72 -287 1 611 593 91 131 0 chr15 3512155 3512254 -99982720 - L1_Mus1 LINE L1 0 6567 6456 1 611 356 352 50 105 chr15 3512254 3512514 -99982460 + ORR1E LTR MaLR 73 324 -35 1 611 233 287 12 117 chr15 3512607 3512769 -99982205 - MT2_Mm LTR ERVL -120 373 229 1 611 519 17 0 0 chr15 3513004 3513064 -99981910 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 611 225 0 0 0 chr15 3513276 3513301 -99981673 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 611 459 0 0 0 chr15 3513301 3513351 -99981623 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 611 752 310 88 20 chr15 3514617 3515025 -99979949 + Lx7 LINE L1 6924 7359 -337 2 611 200 167 0 40 chr15 3515040 3515090 -99979884 + T-rich Low_complexity Low_complexity 2 49 0 2 611 199 125 62 0 chr15 3515092 3515140 -99979834 + (CAGAGA)n Simple_repeat Simple_repeat 2 52 0 2 611 256 294 10 19 chr15 3515155 3515259 -99979715 + Lx7 LINE L1 7583 7685 -11 2 611 260 327 122 0 chr15 3515656 3515763 -99979211 + PB1D7 SINE Alu 1 120 0 2 611 330 235 0 0 chr15 3517671 3517752 -99977222 + (TA)n Simple_repeat Simple_repeat 1 81 0 2 611 462 269 149 0 chr15 3519629 3519763 -99975211 - RSINE1 SINE B4 0 165 12 2 611 397 372 92 98 chr15 3519969 3520176 -99974798 - MLT1F1 LTR MaLR -2 567 346 2 611 1385 222 73 60 chr15 3520176 3520545 -99974429 + ORR1D1 LTR MaLR 1 374 0 2 611 397 372 92 98 chr15 3520545 3520868 -99974106 - MLT1F1 LTR MaLR -224 345 40 2 611 291 28 0 0 chr15 3521302 3521338 -99973636 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 611 273 89 0 0 chr15 3521341 3521386 -99973588 + (GA)n Simple_repeat Simple_repeat 2 46 0 3 611 268 237 51 26 chr15 3521471 3521549 -99973425 - RSINE1 SINE B4 0 165 86 3 611 405 212 0 0 chr15 3521647 3521713 -99973261 - B3A SINE B2 -132 66 1 3 611 193 320 9 80 chr15 3521911 3522023 -99972951 + MIRc SINE MIR 158 261 -7 3 611 24 0 0 0 chr15 3523171 3523195 -99971779 + AT_rich Low_complexity Low_complexity 1 24 0 3 611 390 219 138 32 chr15 3523721 3523910 -99971064 + LTR37A LTR ERV1 216 424 -2 3 611 432 0 0 0 chr15 3524435 3524483 -99970491 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 611 265 281 33 177 chr15 3524984 3525190 -99969784 + MLT1A LTR MaLR 1 189 -201 3 611 365 307 136 13 chr15 3526680 3526835 -99968139 + B3 SINE B2 2 175 -41 3 611 21 0 0 0 chr15 3526836 3526857 -99968117 + AT_rich Low_complexity Low_complexity 1 21 0 4 611 441 273 0 0 chr15 3527218 3527357 -99967617 + (CA)n Simple_repeat Simple_repeat 2 140 0 4 611 200 213 16 0 chr15 3527741 3527802 -99967172 + (TTG)n Simple_repeat Simple_repeat 2 63 0 4 611 186 183 15 91 chr15 3529547 3529613 -99965361 - L4 LINE RTE -1776 253 193 4 611 435 106 0 0 chr15 3530181 3530247 -99964727 + (TG)n Simple_repeat Simple_repeat 1 66 0 4 611 212 250 0 0 chr15 3531084 3531132 -99963842 + (CATA)n Simple_repeat Simple_repeat 4 51 0 4 611 262 160 76 8 chr15 3531143 3531275 -99963699 + (TA)n Simple_repeat Simple_repeat 1 141 0 4 611 507 95 0 0 chr15 3532657 3532731 -99962243 + (CA)n Simple_repeat Simple_repeat 2 75 0 4 611 585 0 0 0 chr15 3532819 3532884 -99962090 + (TAAAA)n Simple_repeat Simple_repeat 2 66 0 4 611 252 220 0 0 chr15 3533122 3533172 -99961802 + (CCG)n Simple_repeat Simple_repeat 3 52 0 4 611 278 100 40 0 chr15 3533264 3533314 -99961660 + (GGGGA)n Simple_repeat Simple_repeat 2 53 0 5 611 2945 33 11 14 chr15 3533743 3534110 -99960864 - L1Md_F3 LINE L1 -2 6582 6217 5 611 774 311 102 8 chr15 3535672 3535938 -99959036 + MTEa LTR MaLR 24 314 -65 5 611 572 231 79 89 chr15 3535939 3536219 -99958755 + B4 SINE B4 2 278 -14 5 611 33 0 0 0 chr15 3536287 3536320 -99958654 + AT_rich Low_complexity Low_complexity 1 33 0 5 611 216 328 42 33 chr15 3536555 3536675 -99958299 + L2b LINE L2 3050 3170 -205 5 611 505 326 163 57 chr15 3536868 3537671 -99957303 + L2a LINE L2 2320 3215 -211 5 611 596 252 9 66 chr15 3538086 3538114 -99956860 + MLT2D LTR ERVL 3 27 -387 5 611 1810 125 167 12 chr15 3538114 3538455 -99956519 + ORR1B1 LTR MaLR 1 394 0 5 611 596 252 9 66 chr15 3538455 3538638 -99956336 + MLT2D LTR ERVL 28 202 -212 5 612 258 239 137 57 chr15 3539061 3539185 -99955789 - L3 LINE CR1 -94 4395 4262 5 612 845 251 50 15 chr15 3540110 3540312 -99954662 - B3 SINE B2 0 216 8 6 612 540 310 38 5 chr15 3540875 3541060 -99953914 - MER115 DNA Tip100 -1 692 502 6 612 235 384 60 42 chr15 3541235 3541401 -99953573 - MER115 DNA Tip100 -482 211 43 6 612 631 263 106 60 chr15 3541567 3542048 -99952926 + Lx8 LINE L1 6966 7468 -5 6 612 354 305 43 5 chr15 3542255 3542443 -99952531 - L1MA4 LINE L1 -372 5928 5734 6 612 429 283 77 53 chr15 3542472 3542771 -99952203 + L1M2 LINE L1 5350 5655 -645 6 612 419 305 76 0 chr15 3543154 3543272 -99951702 + ID_B1 SINE B4 80 206 -18 6 612 254 267 17 0 chr15 3543275 3543335 -99951639 + CT-rich Low_complexity Low_complexity 6 66 0 6 612 235 331 119 52 chr15 3543335 3543534 -99951440 + RSINE1 SINE B4 93 282 -10 6 612 22 56 0 0 chr15 3544310 3544346 -99950628 + AT_rich Low_complexity Low_complexity 1 36 0 6 612 528 184 3 14 chr15 3544400 3544512 -99950462 + B1F SINE Alu 1 110 -7 6 612 292 109 0 15 chr15 3545108 3545173 -99949801 + Lx LINE L1 6590 6653 -1 7 612 347 194 99 86 chr15 3546150 3546302 -99948672 - Lx4B LINE L1 -2 7056 6903 7 612 710 253 86 133 chr15 3546588 3547255 -99947719 - L1_Mur3 LINE L1 -1081 4799 4165 7 612 4519 141 46 15 chr15 3547258 3547751 -99947223 - L1_Mur2 LINE L1 -631 5246 4732 7 612 219 36 0 0 chr15 3547751 3547779 -99947195 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 7 612 4519 141 46 15 chr15 3547779 3548130 -99946844 - L1_Mur2 LINE L1 -1146 4731 4376 7 612 272 48 24 0 chr15 3548131 3548173 -99946801 + (CAAAA)n Simple_repeat Simple_repeat 1 43 0 7 612 1914 166 51 0 chr15 3548173 3548528 -99946446 + L1_Mur1 LINE L1 5289 5661 -225 7 612 580 175 7 59 chr15 3548533 3548685 -99946289 + Lx2B LINE L1 6853 6996 -4 7 612 1620 83 0 16 chr15 3548840 3549097 -99945877 + L1_Mm LINE L1 1936 2188 -3695 7 612 3539 104 31 2 chr15 3549235 3549755 -99945219 + L1_Mus4 LINE L1 6095 6629 -7 7 612 348 24 0 0 chr15 3550647 3550688 -99944286 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 612 180 111 0 0 chr15 3550689 3550716 -99944258 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 8 612 260 49 0 47 chr15 3550932 3550975 -99943999 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 8 612 208 275 149 48 chr15 3552238 3552406 -99942568 + L2 LINE L2 1407 1591 -1828 8 612 221 0 0 33 chr15 3552437 3552467 -99942507 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 8 612 1160 143 76 5 chr15 3552603 3552814 -99942160 + URR1A DNA MER1_type 1 226 0 8 612 269 287 159 11 chr15 3552836 3553012 -99941962 + L2 LINE L2 1851 2052 -1367 8 612 359 92 0 15 chr15 3553139 3553205 -99941769 + (TTA)n Simple_repeat Simple_repeat 2 66 0 8 612 249 177 161 0 chr15 3553401 3553463 -99941511 + L2 LINE L2 2043 2114 -1305 8 612 216 0 0 0 chr15 3553811 3553835 -99941139 + (T)n Simple_repeat Simple_repeat 1 24 0 8 612 2505 239 47 45 chr15 3553939 3554712 -99940262 + Lx7 LINE L1 6804 7577 -119 8 612 628 234 16 22 chr15 3554714 3554860 -99940114 - B1_Mur4 SINE Alu -1 149 1 8 612 439 220 43 43 chr15 3554861 3554999 -99939975 + Lx6 LINE L1 7319 7456 -4 9 612 356 40 0 20 chr15 3555410 3555461 -99939513 + (TATG)n Simple_repeat Simple_repeat 3 52 0 9 612 406 87 663 0 chr15 3555461 3555550 -99939424 - B2_Mm2 SINE B2 -47 148 1 9 612 378 119 12 23 chr15 3555774 3555860 -99939114 + (TG)n Simple_repeat Simple_repeat 1 85 0 9 612 580 284 18 36 chr15 3555863 3556031 -99938943 - RSINE1 SINE B4 0 165 1 9 612 269 210 0 0 chr15 3556143 3556205 -99938769 + T-rich Low_complexity Low_complexity 1 62 0 9 612 207 100 0 0 chr15 3556596 3556626 -99938348 + (CAT)n Simple_repeat Simple_repeat 1 30 0 9 612 315 275 158 23 chr15 3556803 3556925 -99938049 - Lx8 LINE L1 -1 7472 7327 9 612 213 39 0 0 chr15 3556925 3556951 -99938023 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 9 612 315 275 158 23 chr15 3556951 3556999 -99937975 - Lx8 LINE L1 -147 7326 7279 9 612 256 326 109 30 chr15 3557024 3557125 -99937849 + LTR33 LTR ERVL 183 291 -224 9 612 21 36 0 0 chr15 3558222 3558250 -99936724 + AT_rich Low_complexity Low_complexity 1 28 0 1 612 2344 262 26 24 chr15 3558354 3558733 -99936241 + Lx7 LINE L1 6419 6806 -890 1 612 246 32 0 0 chr15 3558733 3558764 -99936210 + (TCCCC)n Simple_repeat Simple_repeat 4 34 0 1 612 2344 262 26 24 chr15 3558764 3558999 -99935975 + Lx7 LINE L1 6807 7034 -662 1 612 188 416 8 31 chr15 3559317 3559446 -99935528 + MER5A DNA MER1_type 1 126 -63 1 612 226 306 39 48 chr15 3559350 3559453 -99935521 - MER5A DNA MER1_type -22 167 66 1 612 473 269 0 54 chr15 3560375 3560560 -99934414 + CT-rich Low_complexity Low_complexity 3 177 0 1 612 609 333 27 5 chr15 3560592 3560779 -99934195 - ID_B1 SINE B4 -33 191 1 1 612 863 264 41 0 chr15 3562154 3562351 -99932623 + B3 SINE B2 2 206 -10 1 612 1436 149 12 122 chr15 3562545 3562889 -99932085 - RLTR23 LTR ERV1 0 430 125 1 612 252 325 26 0 chr15 3563041 3563158 -99931816 + L1M2 LINE L1 2570 2689 -3454 1 612 462 56 14 0 chr15 3563159 3563230 -99931744 - L1Md_F2 LINE L1 -1 6581 6510 1 612 3017 46 6 0 chr15 3563233 3563599 -99931375 - L1Md_F2 LINE L1 -183 6399 6032 1 612 633 160 37 124 chr15 3563633 3563792 -99931182 - Lx9 LINE L1 -31 7613 7466 1 612 515 29 0 29 chr15 3563792 3563862 -99931112 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 1 612 633 160 37 124 chr15 3563862 3563944 -99931030 - Lx9 LINE L1 -179 7465 7393 1 612 537 58 0 0 chr15 3564226 3564295 -99930679 + (GA)n Simple_repeat Simple_repeat 2 70 0 1 612 441 0 0 0 chr15 3564293 3564342 -99930632 + (GGAA)n Simple_repeat Simple_repeat 2 50 0 1 612 1097 299 97 60 chr15 3564342 3565447 -99929527 + L1M2 LINE L1 2896 4041 -2102 1 612 558 309 34 15 chr15 3565470 3565733 -99929241 + L1M2 LINE L1 4884 5151 -992 1 612 282 287 70 32 chr15 3565826 3566006 -99928968 - Tigger1 DNA MER2_type -1410 1008 699 1 612 348 234 166 35 chr15 3567018 3567217 -99927757 + L1MD3 LINE L1 7760 7984 -11 1 612 198 0 0 0 chr15 3567281 3567303 -99927671 + (GA)n Simple_repeat Simple_repeat 1 22 0 1 612 924 143 0 0 chr15 3567303 3567457 -99927517 + (GGA)n Simple_repeat Simple_repeat 2 155 0 1 612 271 215 0 0 chr15 3567533 3567598 -99927376 + T-rich Low_complexity Low_complexity 1 65 0 1 612 257 118 0 19 chr15 3567718 3567770 -99927204 + (TTTTG)n Simple_repeat Simple_repeat 4 54 0 1 612 458 201 32 103 chr15 3567771 3567926 -99927048 - B1F2 SINE Alu 0 149 6 1 612 750 53 0 0 chr15 3568941 3569036 -99925938 + (TTTCG)n Simple_repeat Simple_repeat 2 96 0 1 612 752 250 54 15 chr15 3569056 3569259 -99925715 + B3 SINE B2 1 211 -5 1 612 595 69 0 33 chr15 3569273 3569363 -99925611 - 4.5SRNA scRNA scRNA 0 94 8 1 612 1645 102 41 8 chr15 3569363 3569609 -99925365 + L1Md_F2 LINE L1 6317 6570 -12 1 612 1998 62 7 7 chr15 3569615 3569891 -99925083 - L1_Mus2 LINE L1 0 6566 6291 1 612 285 129 97 0 chr15 3570166 3570259 -99924715 + (TA)n Simple_repeat Simple_repeat 2 103 0 1 612 629 106 24 16 chr15 3571295 3571420 -99923554 - L1_Mus3 LINE L1 -9 6629 6504 1 612 265 288 25 17 chr15 3571498 3571618 -99923356 - Lx9 LINE L1 -47 7597 7477 1 612 1494 302 19 36 chr15 3571649 3572239 -99922735 - Lx9 LINE L1 -127 7517 6938 1 612 1431 260 30 32 chr15 3572240 3572701 -99922273 + L1_Rod LINE L1 3906 4365 -1482 1 612 1475 126 0 9 chr15 3572701 3572933 -99922041 - Lx5 LINE L1 -1221 5829 5600 1 612 4506 172 19 14 chr15 3572937 3573720 -99921254 + Lx5 LINE L1 6258 7044 -6 1 612 544 281 6 6 chr15 3573722 3573901 -99921073 + L1_Mur3 LINE L1 4362 4540 -1340 1 612 238 333 171 26 chr15 3574474 3574591 -99920383 - B1F SINE Alu -3 146 13 1 612 236 344 105 38 chr15 3574476 3574609 -99920365 - ID_B1 SINE B4 -5 219 78 1 612 2295 119 0 0 chr15 3575038 3575365 -99919609 + ORR1A2 LTR MaLR 1 327 0 1 612 23 33 0 0 chr15 3575717 3575747 -99919227 + AT_rich Low_complexity Low_complexity 1 30 0 1 612 15502 116 17 25 chr15 3576820 3579831 -99915143 + L1VL4 LINE L1 303 3278 -281 1 612 500 169 0 0 chr15 3579831 3579920 -99915054 + L1MD LINE L1 3658 3746 -2400 1 612 1396 288 111 13 chr15 3579923 3580475 -99914499 - Lx8 LINE L1 -26 7447 6842 1 612 314 288 148 67 chr15 3580475 3580624 -99914350 - Lx8 LINE L1 -597 6876 6716 1 612 208 342 74 33 chr15 3581612 3581733 -99913241 - MIR SINE MIR -19 243 118 1 612 1204 300 27 24 chr15 3582061 3582477 -99912497 - MTE2b LTR MaLR -14 405 1 1 612 226 289 11 88 chr15 3582476 3582488 -99912486 - PB1D10 SINE Alu -15 102 19 1 612 271 295 25 13 chr15 3582488 3582567 -99912407 - ID_B1 SINE B4 -45 179 100 1 612 305 186 59 0 chr15 3582893 3582995 -99911979 + (TA)n Simple_repeat Simple_repeat 2 109 0 1 612 244 369 84 60 chr15 3583361 3583528 -99911446 + MLT1H LTR MaLR 97 267 -282 1 612 600 199 114 0 chr15 3584978 3585109 -99909865 - B1_Mur2 SINE Alu -2 147 2 1 612 198 0 0 0 chr15 3585289 3585311 -99909663 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 612 360 0 0 0 chr15 3586174 3586214 -99908760 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 612 911 272 141 13 chr15 3586218 3586524 -99908450 - ORR1D2 LTR MaLR -25 345 1 1 612 414 39 0 0 chr15 3586541 3586593 -99908381 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 612 637 320 63 56 chr15 3586595 3586863 -99908111 - B4A SINE B4 -20 272 3 1 612 243 0 0 0 chr15 3587074 3587101 -99907873 + (A)n Simple_repeat Simple_repeat 1 27 0 1 612 194 139 47 0 chr15 3588224 3588267 -99906707 + (CACCAT)n Simple_repeat Simple_repeat 5 49 0 1 612 399 301 30 66 chr15 3588279 3588446 -99906528 - RSINE1 SINE B4 -2 163 3 1 612 318 26 0 0 chr15 3588688 3588727 -99906247 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 612 4829 84 13 26 chr15 3589133 3589828 -99905146 - Lx3_Mus LINE L1 0 7009 6324 1 612 474 263 18 0 chr15 3590762 3590876 -99904098 - Tigger16b DNA Tigger -1 336 221 1 612 258 286 89 101 chr15 3590983 3591029 -99903945 + Charlie16a DNA MER1_type 68 103 -239 1 612 3535 57 0 30 chr15 3591029 3591497 -99903477 + L1_Mus1 LINE L1 6113 6566 -1 1 612 258 286 89 101 chr15 3591497 3591629 -99903345 + Charlie16a DNA MER1_type 104 244 -98 1 612 2152 131 3 30 chr15 3592242 3592580 -99902394 - ORR1A4 LTR MaLR 0 329 1 1 612 840 135 25 6 chr15 3593388 3593545 -99901429 - L1_Mur2 LINE L1 -474 5403 5244 1 612 1763 118 50 3 chr15 3593545 3593843 -99901131 + L1_Mus4 LINE L1 6323 6634 -2 1 612 33 25 0 0 chr15 3593869 3593909 -99901065 + AT_rich Low_complexity Low_complexity 1 40 0 1 612 613 237 155 5 chr15 3593996 3594183 -99900791 + B3 SINE B2 2 216 0 1 612 436 265 186 19 chr15 3594217 3594475 -99900499 - L1MC4a LINE L1 -28 7854 7554 1 612 2307 175 60 52 chr15 3596788 3596997 -99897977 - RLTR28 LTR ERVL -2 522 294 1 612 1801 50 50 4 chr15 3596997 3597237 -99897737 + L1_Mus1 LINE L1 6316 6566 -1 1 612 2307 175 60 52 chr15 3597237 3597479 -99897495 - RLTR28 LTR ERVL -231 293 64 1 612 2870 64 35 0 chr15 3597479 3597854 -99897120 - RLTR10 LTR ERVK -2 388 1 1 612 2307 175 60 52 chr15 3597854 3597919 -99897055 - RLTR28 LTR ERVL -461 63 1 1 612 237 276 29 67 chr15 3598179 3598284 -99896690 - RMER4A LTR ERVK -358 108 8 1 612 1273 162 9 0 chr15 3598373 3598595 -99896379 + URR1B DNA MER1_type 2 225 0 1 612 254 291 50 62 chr15 3599210 3599371 -99895603 + L1M3 LINE L1 4699 4857 -1283 1 612 317 245 11 0 chr15 3599388 3599482 -99895492 + (TA)n Simple_repeat Simple_repeat 2 96 0 1 612 587 277 101 31 chr15 3599500 3599721 -99895253 + L1M3 LINE L1 4888 5111 -1029 1 612 198 0 0 0 chr15 3599721 3599743 -99895231 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 1 612 587 277 101 31 chr15 3599743 3599838 -99895136 + L1M3 LINE L1 5112 5225 -915 1 612 1870 184 48 6 chr15 3600043 3600398 -99894576 + ORR1C1 LTR MaLR 9 378 0 1 612 30266 111 26 10 chr15 3600730 3602320 -99892654 + L1Md_F2 LINE L1 409 1961 -3922 1 612 270 0 0 0 chr15 3602320 3602350 -99892624 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 1 612 30266 83 15 18 chr15 3602350 3605922 -99889052 + L1Md_F2 LINE L1 1962 5586 -297 1 612 6995 83 18 7 chr15 3605922 3606903 -99888071 + L1Md_F2 LINE L1 5587 6578 -4 1 612 456 67 0 0 chr15 3607982 3608042 -99886932 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 612 995 101 0 12 chr15 3608710 3608870 -99886104 + (TTCC)n Simple_repeat Simple_repeat 4 161 0 1 612 274 317 70 0 chr15 3608879 3609030 -99885944 + LTR16B LTR ERVL 288 459 -3 1 612 412 149 9 38 chr15 3609126 3609231 -99885743 - Lx2 LINE L1 -1 6996 6895 1 612 477 115 0 0 chr15 3610067 3610154 -99884820 + (CA)n Simple_repeat Simple_repeat 1 87 0 1 612 23 33 0 0 chr15 3610636 3610666 -99884308 + AT_rich Low_complexity Low_complexity 1 30 0 1 612 547 342 28 43 chr15 3611281 3611492 -99883482 - MER20 DNA MER1_type -9 210 3 1 612 2960 113 81 2 chr15 3613214 3613673 -99881301 + Lx LINE L1 6157 6651 -3 1 612 284 282 11 86 chr15 3613918 3614011 -99880963 - ORR1E LTR MaLR -273 86 1 1 612 180 304 49 37 chr15 3614316 3614398 -99880576 - MIRc SINE MIR -91 177 95 1 612 292 321 84 14 chr15 3614588 3614730 -99880244 + MIR SINE MIR 41 192 -70 1 612 5180 81 6 9 chr15 3615065 3615761 -99879213 + Lx3_Mus LINE L1 6308 7001 -8 1 612 6781 61 43 2 chr15 3615783 3616676 -99878298 - RLTR13B3 LTR ERVK 0 929 1 1 612 441 0 0 0 chr15 3618204 3618253 -99876721 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 612 495 0 0 0 chr15 3618253 3618307 -99876667 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 612 1515 329 64 46 chr15 3618335 3619010 -99875964 + MER21B LTR ERV1 58 744 -119 1 612 622 314 47 10 chr15 3619531 3619724 -99875250 + MER58A DNA MER1_type 1 200 -24 1 612 492 18 0 0 chr15 3619724 3619781 -99875193 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 612 428 329 33 56 chr15 3620199 3620379 -99874595 - MER5A DNA MER1_type -1 188 13 1 612 26 0 0 0 chr15 3623189 3623215 -99871759 + AT_rich Low_complexity Low_complexity 1 26 0 1 612 400 356 53 7 chr15 3623334 3623484 -99871490 + LTR40c LTR ERVL 18 174 -291 1 612 390 356 92 18 chr15 3623514 3623677 -99871297 + LTR40c LTR ERVL 207 381 -81 1 612 332 146 47 30 chr15 3623881 3624050 -99870924 + (TA)n Simple_repeat Simple_repeat 1 172 0 2 612 210 107 0 0 chr15 3624050 3624078 -99870896 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 612 734 268 144 8 chr15 3624172 3624435 -99870539 + RMER15 LTR ERVL 275 573 -2 2 612 198 0 0 0 chr15 3624555 3624577 -99870397 + (T)n Simple_repeat Simple_repeat 1 22 0 2 612 439 294 69 87 chr15 3625146 3625537 -99869437 + Lx9 LINE L1 7221 7604 -40 2 612 24 53 0 0 chr15 3625570 3625608 -99869366 + AT_rich Low_complexity Low_complexity 1 38 0 2 612 254 221 52 0 chr15 3625699 3625776 -99869198 - MER53 DNA hAT -9 184 104 2 612 278 36 53 18 chr15 3625959 3626016 -99868958 + (TTTTTG)n Simple_repeat Simple_repeat 2 60 0 2 612 1106 93 0 26 chr15 3626016 3626170 -99868804 - B1_Mur4 SINE Alu 0 150 1 2 612 25 65 0 0 chr15 3626555 3626601 -99868373 + AT_rich Low_complexity Low_complexity 1 46 0 2 612 322 282 0 14 chr15 3626737 3626809 -99868165 - ID4_ SINE ID -3 80 10 2 612 2922 131 98 45 chr15 3626944 3627861 -99867113 + RLTR13D1 LTR ERVK 1 956 -2 2 612 1178 240 91 37 chr15 3628011 3628362 -99866612 - ORR1D2 LTR MaLR 0 370 1 2 612 522 283 86 86 chr15 3628390 3628587 -99866387 - B3A SINE B2 0 198 2 2 612 268 275 14 0 chr15 3628810 3628879 -99866095 - MER53 DNA hAT -122 71 2 2 612 459 365 137 20 chr15 3629190 3629489 -99865485 - L1MEg LINE L1 -5659 425 92 2 612 259 246 35 0 chr15 3629536 3629593 -99865381 + AluF_3 SINE Alu 154 212 -99 2 612 243 288 0 0 chr15 3629952 3630018 -99864956 + (TG)n Simple_repeat Simple_repeat 1 66 0 2 612 667 324 14 27 chr15 3630083 3630302 -99864672 - B4 SINE B4 -68 224 9 2 612 396 0 0 0 chr15 3630613 3630657 -99864317 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 612 3229 280 31 45 chr15 3630664 3631897 -99863077 + Lx9 LINE L1 6415 7629 -15 2 612 399 264 9 28 chr15 3632174 3632283 -99862691 + Lx8 LINE L1 7231 7337 -136 2 612 22 0 0 0 chr15 3632808 3632830 -99862144 + AT_rich Low_complexity Low_complexity 1 22 0 2 612 2700 178 16 21 chr15 3632836 3633348 -99861626 - Lx4A LINE L1 0 7058 6550 2 612 3298 164 44 8 chr15 3633349 3634007 -99860967 + Lx4A LINE L1 5885 6566 -492 2 612 351 0 0 0 chr15 3634679 3634718 -99860256 + (TTA)n Simple_repeat Simple_repeat 2 40 0 2 612 541 203 14 42 chr15 3634728 3634872 -99860102 - Lx4A LINE L1 -41 7017 6878 2 612 4402 112 15 24 chr15 3635972 3636648 -99858326 + Lx3_Mus LINE L1 6335 7004 -5 2 612 180 0 0 0 chr15 3636656 3636676 -99858298 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2 612 2588 266 81 27 chr15 3636676 3637128 -99857846 - Lx5 LINE L1 -19 7031 6582 2 612 7020 61 11 2 chr15 3637128 3638032 -99856942 + L1Md_F2 LINE L1 5671 6582 0 2 612 2588 266 81 27 chr15 3638032 3638367 -99856607 - Lx5 LINE L1 -469 6581 6201 2 612 3750 169 38 13 chr15 3638402 3639455 -99855519 + Lx5 LINE L1 5111 6197 -853 2 612 576 335 39 28 chr15 3640675 3641184 -99853790 + L1M2 LINE L1 4524 5038 -1105 2 612 4267 223 86 27 chr15 3641343 3641598 -99853376 + Lx9 LINE L1 6160 6432 -1212 2 612 342 0 0 0 chr15 3641598 3641636 -99853338 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 612 4267 223 86 27 chr15 3641636 3642619 -99852355 + Lx9 LINE L1 6433 7472 -172 2 612 604 374 68 56 chr15 3643281 3643695 -99851279 - MLT1G3 LTR MaLR -168 427 9 2 612 451 282 96 32 chr15 3644591 3644771 -99850203 + ORR1B1 LTR MaLR 65 240 -127 2 612 1889 146 48 0 chr15 3645020 3645355 -99849619 - RLTR15 LTR ERVK -8 351 1 2 612 185 83 0 27 chr15 3645396 3645433 -99849541 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 2 612 26 0 0 0 chr15 3647253 3647279 -99847695 + AT_rich Low_complexity Low_complexity 1 26 0 2 612 288 0 0 0 chr15 3647597 3647629 -99847345 + (TC)n Simple_repeat Simple_repeat 1 32 0 2 612 481 0 31 15 chr15 3648418 3648483 -99846491 + (TTTTG)n Simple_repeat Simple_repeat 2 67 0 2 612 300 269 19 7 chr15 3649890 3650004 -99844970 + MLT1A0 LTR MaLR 4 114 -294 2 612 243 0 0 0 chr15 3650168 3650195 -99844779 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2 612 1790 124 84 13 chr15 3650669 3650979 -99843995 - IAPEY3_LTR LTR ERVK 0 332 1 2 612 1795 50 0 0 chr15 3651102 3651324 -99843650 - L1Md_F2 LINE L1 -12 6570 6349 2 612 552 171 214 24 chr15 3651694 3651820 -99843154 + B1_Mur4 SINE Alu 1 150 0 2 612 305 360 52 21 chr15 3651828 3652061 -99842913 + Charlie1a DNA MER1_type 84 323 -1132 2 612 2961 90 2 30 chr15 3652063 3652500 -99842474 + L1_Mus4 LINE L1 6206 6630 -6 2 612 30 0 0 0 chr15 3652980 3653010 -99841964 + AT_rich Low_complexity Low_complexity 1 30 0 2 612 25 31 0 0 chr15 3653148 3653180 -99841794 + AT_rich Low_complexity Low_complexity 1 32 0 2 612 894 168 0 26 chr15 3653552 3653705 -99841269 + B1_Mur4 SINE Alu 2 150 0 2 612 795 263 4 43 chr15 3653931 3654189 -99840785 + Lx2B LINE L1 6726 6973 -27 2 612 576 271 60 101 chr15 3655135 3655402 -99839572 - MTE2a LTR MaLR -122 257 2 2 612 284 296 164 87 chr15 3655592 3656054 -99838920 - L2 LINE L2 -1332 2087 1590 2 612 443 276 7 88 chr15 3656068 3656215 -99838759 + RMER30 DNA MER1_type 6 140 -62 2 612 267 324 47 93 chr15 3656099 3656249 -99838725 - Charlie12 DNA MER1_type -2700 173 31 2 612 206 323 108 13 chr15 3656315 3656472 -99838502 - L2 LINE L2 -1882 1537 1366 2 612 240 35 0 0 chr15 3657191 3657220 -99837754 + (A)n Simple_repeat Simple_repeat 1 29 0 2 612 22 0 0 0 chr15 3658218 3658240 -99836734 + AT_rich Low_complexity Low_complexity 1 22 0 2 612 315 0 0 0 chr15 3658747 3658782 -99836192 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 612 921 312 44 18 chr15 3659930 3660272 -99834702 - MLT1A0 LTR MaLR 0 365 15 2 612 458 187 0 42 chr15 3660340 3660435 -99834539 - Lx2B LINE L1 -363 6637 6547 2 612 481 253 48 128 chr15 3660442 3660919 -99834055 + Lx2B LINE L1 6642 6982 -18 2 612 195 69 0 0 chr15 3660931 3660960 -99834014 + (T)n Simple_repeat Simple_repeat 1 29 0 2 612 419 205 107 35 chr15 3660960 3661157 -99833817 - RMER17C LTR ERVK -138 272 62 2 612 7638 22 0 0 chr15 3662212 3663135 -99831839 + L1Md_T LINE L1 4664 5586 -297 2 612 7835 54 1 17 chr15 3663135 3664147 -99830827 + L1Md_T LINE L1 5587 6582 0 2 612 1567 74 0 9 chr15 3664158 3664377 -99830597 + L1Md_F2 LINE L1 6366 6582 0 2 612 726 30 30 0 chr15 3664585 3664686 -99830288 + (TAGA)n Simple_repeat Simple_repeat 3 106 0 2 612 238 255 94 27 chr15 3664689 3664838 -99830136 - L1MA4 LINE L1 -367 5933 5775 2 612 366 165 0 0 chr15 3664867 3664946 -99830028 + (TA)n Simple_repeat Simple_repeat 1 79 0 2 612 331 211 33 0 chr15 3664952 3665042 -99829932 - L1MA4 LINE L1 -512 5788 5696 2 612 1441 267 14 20 chr15 3665118 3665578 -99829396 + MTEb-int LTR MaLR 971 1577 -3 2 612 277 254 14 27 chr15 3665577 3665628 -99829346 + MTEb LTR MaLR 2 51 -328 2 612 955 222 40 40 chr15 3665628 3665853 -99829121 + URR1B DNA MER1_type 1 225 0 2 612 871 259 23 145 chr15 3665888 3666150 -99828824 + MTEb LTR MaLR 84 315 -64 2 612 665 12 12 0 chr15 3666150 3666232 -99828742 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 2 612 871 259 23 145 chr15 3666232 3666272 -99828702 + MTEb LTR MaLR 316 349 -30 2 612 7415 47 1 0 chr15 3666272 3667611 -99827363 - L1Md_F2 LINE L1 -31 6551 5211 2 612 7078 84 3 1 chr15 3667611 3668990 -99825984 - L1_Mus1 LINE L1 -10 6557 5175 2 612 493 281 0 58 chr15 3669337 3669458 -99825516 + RSINE1 SINE B4 14 127 -38 2 612 456 19 0 0 chr15 3669466 3669519 -99825455 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 612 387 273 20 48 chr15 3669587 3669733 -99825241 + B1_Mur2 SINE Alu 1 142 -7 2 612 287 224 16 31 chr15 3669768 3669897 -99825077 + GA-rich Low_complexity Low_complexity 3 129 0 2 613 627 26 0 0 chr15 3670094 3670171 -99824803 + (TG)n Simple_repeat Simple_repeat 2 78 0 2 613 220 321 0 47 chr15 3670771 3670856 -99824118 - MIRm SINE MIR 0 276 196 2 613 646 287 33 0 chr15 3671886 3672036 -99822938 + RSINE1 SINE B4 3 157 -8 2 613 7122 102 7 33 chr15 3672036 3672439 -99822535 - RLTR13D5 LTR ERVK 0 1023 639 2 613 1966 58 0 0 chr15 3672439 3672680 -99822294 - L1_Mus1 LINE L1 0 6567 6327 2 613 7122 102 7 33 chr15 3672680 3673325 -99821649 - RLTR13D5 LTR ERVK -385 638 4 2 613 297 0 0 0 chr15 3673325 3673358 -99821616 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 613 975 269 33 103 chr15 3673494 3673892 -99821082 + ORR1D2 LTR MaLR 1 370 0 2 613 247 264 0 19 chr15 3674130 3674184 -99820790 + MLT1A1 LTR MaLR 82 134 -240 2 613 246 62 0 0 chr15 3674202 3674234 -99820740 + (TTTTA)n Simple_repeat Simple_repeat 4 35 0 2 613 292 261 50 50 chr15 3674243 3674384 -99820590 + Lx7 LINE L1 7556 7696 0 2 613 206 227 0 13 chr15 3674423 3674499 -99820475 + GA-rich Low_complexity Low_complexity 3 77 0 2 613 415 292 83 15 chr15 3674580 3674712 -99820262 + MLT1A1 LTR MaLR 268 408 0 2 613 276 309 0 5 chr15 3675931 3676010 -99818964 - L2a LINE L2 0 3426 3299 2 613 183 321 106 12 chr15 3675947 3676032 -99818942 - MIR SINE MIR -10 252 160 2 613 212 328 49 32 chr15 3676348 3676471 -99818503 - L2a LINE L2 -89 3337 3213 2 613 34308 47 1 16 chr15 3677876 3683038 -99811936 + L1Md_T LINE L1 507 5586 -297 2 613 8052 39 23 0 chr15 3683038 3684011 -99810963 + L1Md_T LINE L1 5587 6581 -1 2 613 23 54 0 0 chr15 3684011 3684048 -99810926 + AT_rich Low_complexity Low_complexity 1 37 0 2 613 1439 240 215 22 chr15 3684601 3685057 -99809917 + RMER15 LTR ERVL 27 570 -5 2 613 399 328 195 22 chr15 3685195 3685849 -99809125 + L1MEc LINE L1 2061 2826 -3493 2 613 309 208 0 0 chr15 3685886 3685939 -99809035 + B1F SINE Alu 95 147 -2 2 613 297 0 0 0 chr15 3685990 3686023 -99808951 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 613 462 325 165 38 chr15 3686031 3686565 -99808409 + L1M4 LINE L1 4447 5048 -1098 2 613 20561 99 40 4 chr15 3686789 3690558 -99804416 + L1_Mur1 LINE L1 238 4394 -1492 2 613 4800 79 7 19 chr15 3690546 3691243 -99803731 + L1_Mur1 LINE L1 5182 5870 -16 2 613 6110 91 17 1 chr15 3691242 3692133 -99802841 + Lx3_Mus LINE L1 6097 7001 -8 2 613 236 0 0 161 chr15 3692555 3692679 -99802295 + (GCCTG)n Simple_repeat Simple_repeat 5 108 0 2 613 204 217 0 0 chr15 3692685 3692731 -99802243 + CT-rich Low_complexity Low_complexity 4 49 0 2 613 269 308 0 45 chr15 3692785 3692897 -99802077 + MLT1A1 LTR MaLR 294 400 -8 3 613 440 331 97 31 chr15 3692906 3693258 -99801716 + L1ME1 LINE L1 5798 6172 -7 3 613 225 136 45 0 chr15 3695282 3695348 -99799626 + (TA)n Simple_repeat Simple_repeat 1 69 0 3 613 25 31 0 0 chr15 3695469 3695501 -99799473 + AT_rich Low_complexity Low_complexity 1 32 0 3 613 304 362 87 70 chr15 3696954 3697195 -99797779 + L1MC4 LINE L1 6738 6982 -1060 3 613 387 141 0 0 chr15 3697891 3697969 -99797005 + (TA)n Simple_repeat Simple_repeat 2 79 0 3 613 387 0 0 0 chr15 3697974 3698017 -99796957 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 613 2344 145 20 25 chr15 3698018 3698415 -99796559 - RLTR9D LTR ERVK -4 399 5 3 613 441 54 0 0 chr15 3698422 3698478 -99796496 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 613 1777 299 59 15 chr15 3698568 3699108 -99795866 - MTE-int LTR MaLR -244 1336 773 3 613 243 0 0 0 chr15 3699833 3699860 -99795114 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 3 613 499 299 104 88 chr15 3703061 3703504 -99791470 + MLT1D LTR MaLR 1 450 -55 3 613 24 0 0 0 chr15 3703595 3703619 -99791355 + AT_rich Low_complexity Low_complexity 1 24 0 3 613 754 251 202 15 chr15 3703827 3704170 -99790804 - RMER5 LTR ERV1 -2 532 126 3 613 3759 85 2 0 chr15 3704170 3704723 -99790251 - L1_Mm LINE L1 -2293 3590 3037 3 613 7174 44 2 2 chr15 3704723 3705607 -99789367 + L1Md_F2 LINE L1 5687 6570 -12 3 613 343 248 61 53 chr15 3705615 3705747 -99789227 - RMER5 LTR ERV1 -401 133 1 3 613 325 274 134 63 chr15 3706145 3706383 -99788591 - L1MC LINE L1 -832 5512 5258 3 613 1280 201 189 86 chr15 3706477 3706989 -99787985 + RMER4B LTR ERVK 1 565 -20 3 613 26 0 0 0 chr15 3707073 3707099 -99787875 + AT_rich Low_complexity Low_complexity 1 26 0 3 613 2442 38 0 0 chr15 3707099 3707386 -99787588 - L1_Mus1 LINE L1 -12 6555 6269 3 613 998 116 0 7 chr15 3707427 3707575 -99787399 + B1_Mus1 SINE Alu 2 148 0 3 613 656 210 48 20 chr15 3707636 3707782 -99787192 + URR1A DNA MER1_type 77 226 0 3 613 35 24 0 0 chr15 3708256 3708298 -99786676 + AT_rich Low_complexity Low_complexity 1 42 0 3 613 470 291 159 50 chr15 3708302 3708762 -99786212 - Lx9 LINE L1 -20 7624 7115 3 613 21 0 0 0 chr15 3711131 3711152 -99783822 + AT_rich Low_complexity Low_complexity 1 21 0 3 613 6453 177 24 32 chr15 3711277 3712611 -99782363 + Lx5 LINE L1 5728 7050 0 3 613 204 125 0 0 chr15 3713373 3713405 -99781569 + (A)n Simple_repeat Simple_repeat 1 32 0 3 613 4028 169 93 58 chr15 3713551 3714423 -99780551 - RMER19B LTR ERVK 0 902 1 3 613 403 275 109 51 chr15 3714443 3714813 -99780161 - L1M2c LINE L1 -4646 2143 1745 3 613 1466 221 70 3 chr15 3714813 3715158 -99779816 - ORR1D2 LTR MaLR 0 370 3 3 613 403 275 109 51 chr15 3715158 3715255 -99779719 - L1M2c LINE L1 -5045 1744 1649 3 613 217 172 40 24 chr15 3715301 3715426 -99779548 + (TA)n Simple_repeat Simple_repeat 1 127 0 3 613 25 31 0 0 chr15 3715434 3715466 -99779508 + AT_rich Low_complexity Low_complexity 1 32 0 3 613 2085 159 45 6 chr15 3715625 3715978 -99778996 + ORR1B2 LTR MaLR 1 367 0 3 613 2726 117 30 0 chr15 3716676 3717113 -99777861 + Lx4A LINE L1 6286 6735 -323 3 613 2083 79 68 62 chr15 3717115 3717440 -99777534 - ORR1A2 LTR MaLR 0 327 1 3 613 243 212 0 29 chr15 3718203 3718219 -99776755 + polypyrimidine Low_complexity Low_complexity 52 66 0 3 613 1410 56 0 0 chr15 3718219 3718399 -99776575 + (TTC)n Simple_repeat Simple_repeat 1 180 0 3 613 243 212 0 29 chr15 3718399 3718450 -99776524 + CT-rich Low_complexity Low_complexity 1 51 0 3 613 470 17 17 0 chr15 3718902 3718961 -99776013 + (GA)n Simple_repeat Simple_repeat 2 61 0 3 613 360 0 0 0 chr15 3718967 3719007 -99775967 + (TAGA)n Simple_repeat Simple_repeat 3 42 0 3 613 367 293 105 23 chr15 3720546 3720717 -99774257 + LTR16A1 LTR ERVL 261 445 -11 3 613 23 0 0 0 chr15 3720941 3720964 -99774010 + AT_rich Low_complexity Low_complexity 1 23 0 3 613 229 185 23 58 chr15 3722405 3722491 -99772483 + Lx4B LINE L1 6972 7054 -4 3 613 912 245 152 78 chr15 3722516 3722924 -99772050 + Lx5 LINE L1 6605 7042 -8 3 613 22 35 0 0 chr15 3723841 3723870 -99771104 + AT_rich Low_complexity Low_complexity 1 29 0 3 613 474 306 5 0 chr15 3723905 3724104 -99770870 + L1M2 LINE L1 3286 3485 -2658 3 613 256 260 113 8 chr15 3724225 3724349 -99770625 + L1M2 LINE L1 3489 3625 -2518 3 613 800 182 21 7 chr15 3724855 3724999 -99769975 - B1_Mur3 SINE Alu -3 146 1 3 613 377 278 201 17 chr15 3725382 3725561 -99769413 - MER67C LTR ERV1 -414 297 86 3 613 407 224 100 39 chr15 3726147 3726277 -99768697 + MER20 DNA MER1_type 35 172 -47 3 613 636 99 35 7 chr15 3726449 3726592 -99768382 + (TA)n Simple_repeat Simple_repeat 1 147 0 3 613 239 314 165 23 chr15 3726694 3726912 -99768062 + LTR37A LTR ERV1 77 325 -101 3 613 4219 68 2 0 chr15 3726969 3727509 -99767465 - Lx3_Mus LINE L1 -10 6999 6459 3 613 214 311 106 53 chr15 3727938 3728108 -99766866 + L4 LINE RTE 1302 1480 -549 3 613 852 244 139 15 chr15 3728164 3728501 -99766473 - MTEb LTR MaLR 0 379 1 3 613 222 214 0 0 chr15 3729747 3729803 -99765171 + T-rich Low_complexity Low_complexity 1 56 0 3 613 8038 146 16 3 chr15 3729806 3732095 -99762879 - Lx2 LINE L1 0 6997 4679 3 613 9520 167 129 3 chr15 3732092 3732276 -99762698 - Lx2 LINE L1 -2173 3713 3485 3 613 234 0 0 0 chr15 3732276 3732302 -99762672 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 3 613 9520 158 115 2 chr15 3732302 3734440 -99760534 - Lx2 LINE L1 -2402 3484 1111 3 613 917 154 0 14 chr15 3734463 3734608 -99760366 - B1_Mus1 SINE Alu 0 148 6 3 613 3112 137 0 4 chr15 3734613 3735105 -99759869 - L1VL4 LINE L1 -5615 687 198 3 613 300 53 0 0 chr15 3735297 3735335 -99759639 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 613 3923 200 83 29 chr15 3735496 3736401 -99758573 - RMER19B LTR ERVK -12 890 1 3 613 1243 34 0 0 chr15 3736671 3736818 -99758156 + B1_Mus2 SINE Alu 1 147 0 3 613 189 0 0 0 chr15 3736818 3736839 -99758135 + (A)n Simple_repeat Simple_repeat 1 21 0 3 613 476 317 41 127 chr15 3737372 3737741 -99757233 - ORR1E LTR MaLR -20 339 3 3 613 1218 262 9 15 chr15 3738994 3739324 -99755650 - Lx9 LINE L1 -796 6848 6521 3 613 474 309 110 0 chr15 3739332 3739523 -99755451 + Lx9 LINE L1 7206 7417 -227 3 613 1214 269 33 27 chr15 3740328 3740809 -99754165 - L1MA4 LINE L1 -361 5939 5456 3 613 383 348 118 9 chr15 3741117 3741329 -99753645 + MLT1A LTR MaLR 137 371 -3 3 613 244 366 197 5 chr15 3741968 3742171 -99752803 + MIRb SINE MIR 26 267 -1 3 613 958 308 45 40 chr15 3742455 3742807 -99752167 + ORR1E LTR MaLR 1 354 -5 3 613 283 54 0 0 chr15 3742966 3743003 -99751971 + tRNA-Glu-GAG_ tRNA tRNA 1 37 -38 3 613 297 157 0 0 chr15 3743211 3743262 -99751712 - RLTR22_Mus LTR ERVK -216 1592 1542 3 613 578 119 40 0 chr15 3743355 3743456 -99751518 - RLTR22_Mur LTR ERVK -1094 754 650 3 613 1354 71 0 5 chr15 3743456 3743626 -99751348 + L1_Mm LINE L1 5418 5587 -296 3 613 7892 55 5 4 chr15 3743626 3744620 -99750354 + L1Md_F2 LINE L1 5588 6582 0 3 613 1354 71 0 5 chr15 3744620 3744633 -99750341 + L1_Mm LINE L1 5588 5600 -283 3 613 22 56 0 0 chr15 3744771 3744807 -99750167 + AT_rich Low_complexity Low_complexity 1 36 0 3 613 1328 186 77 58 chr15 3745065 3745391 -99749583 - RLTR22_Mur LTR ERVK -1187 661 330 3 613 510 156 11 0 chr15 3745766 3745856 -99749118 + RLTR12A LTR ERVK 18 108 -460 3 613 3837 193 85 38 chr15 3745856 3746690 -99748284 + RMER19B LTR ERVK 1 873 -29 3 613 1896 37 0 0 chr15 3746690 3746933 -99748041 - L1_Mus1 LINE L1 -590 5977 5735 3 613 1218 52 0 0 chr15 3746933 3747087 -99747887 + L1_Mus1 LINE L1 6414 6567 0 3 613 952 212 76 14 chr15 3747133 3747543 -99747431 + RLTR12A LTR ERVK 103 568 0 3 613 752 179 276 5 chr15 3748912 3749097 -99745877 + 7SK RNA RNA 2 236 -95 3 613 417 39 0 0 chr15 3749305 3749356 -99745618 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 613 575 167 8 0 chr15 3749356 3749476 -99745498 + Lx9 LINE L1 7517 7637 -7 3 613 240 111 0 0 chr15 3749936 3749972 -99745002 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 3 613 780 192 38 122 chr15 3749991 3750271 -99744703 + ORR1C1 LTR MaLR 8 292 -102 3 613 402 285 33 6 chr15 3750524 3750633 -99744341 - B4 SINE B4 -4 288 92 3 613 198 346 47 28 chr15 3750795 3750902 -99744072 + MIR3 SINE MIR 7 115 -93 3 613 665 123 0 17 chr15 3751092 3751208 -99743766 + (TTTC)n Simple_repeat Simple_repeat 3 116 0 3 613 181 53 79 0 chr15 3751212 3751250 -99743724 + (TTTTG)n Simple_repeat Simple_repeat 5 45 0 3 613 1044 70 28 0 chr15 3751250 3751392 -99743582 - B1_Mm SINE Alu 0 147 2 3 613 297 0 0 0 chr15 3752044 3752077 -99742897 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 613 23 0 0 0 chr15 3753554 3753577 -99741397 + AT_rich Low_complexity Low_complexity 1 23 0 3 613 949 151 21 36 chr15 3753594 3753787 -99741187 - Lx4B LINE L1 -2 7056 6867 3 613 3722 127 36 20 chr15 3753789 3754450 -99740524 + L1_Mur2 LINE L1 4006 4677 -1200 3 613 237 291 12 12 chr15 3754469 3754549 -99740425 - L1M5 LINE L1 -618 5576 5497 3 613 247 195 0 47 chr15 3754603 3754689 -99740285 + (TTTG)n Simple_repeat Simple_repeat 3 84 0 3 613 422 278 49 27 chr15 3754690 3754875 -99740099 - L1M3 LINE L1 -770 5370 5182 3 613 878 238 15 0 chr15 3755315 3755521 -99739453 - B3 SINE B2 -5 211 3 3 613 1288 321 21 42 chr15 3755526 3756092 -99738882 - Lx8 LINE L1 -220 7253 6700 3 613 270 343 98 44 chr15 3756145 3756328 -99738646 - Lx8 LINE L1 -1084 6389 6197 3 613 1494 218 10 36 chr15 3756330 3756552 -99738422 - MTD LTR MaLR -14 405 191 3 613 3036 65 35 10 chr15 3756552 3756953 -99738021 + RLTR10A LTR ERVK 1 411 0 4 613 1494 218 10 36 chr15 3756953 3757039 -99737935 - MTD LTR MaLR -229 190 105 3 613 35603 25 4 8 chr15 3757039 3762849 -99732125 + L1Md_A LINE L1 1 5586 -297 4 613 8239 43 1 0 chr15 3762850 3763844 -99731130 + L1Md_A LINE L1 5588 6582 0 4 613 568 194 10 0 chr15 3763848 3763946 -99731028 - MTD LTR MaLR -301 120 22 3 613 2594 257 58 35 chr15 3764066 3764108 -99730866 + L1_Mur3 LINE L1 4690 4733 -1147 4 613 212 0 36 0 chr15 3764108 3764136 -99730838 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 613 2594 257 58 35 chr15 3764136 3765062 -99729912 + L1_Mur3 LINE L1 4734 5680 -200 4 613 1244 166 109 4 chr15 3765065 3765313 -99729661 - ORR1B1 LTR MaLR -8 386 113 4 613 8831 114 10 16 chr15 3765313 3766787 -99728187 + L1_Mus2 LINE L1 1816 3281 -2602 4 613 30995 74 4 4 chr15 3766793 3772037 -99722937 + L1Md_F2 LINE L1 250 5589 -297 4 613 7992 50 3 2 chr15 3772037 3773032 -99721942 + L1Md_F2 LINE L1 5590 6585 0 4 613 2392 119 0 0 chr15 3773032 3773420 -99721554 + L1_Mus2 LINE L1 3261 3648 -2235 4 613 10572 93 31 19 chr15 3773421 3775203 -99719771 + L1_Mus2 LINE L1 4149 5980 -586 4 613 1068 86 0 0 chr15 3775203 3775342 -99719632 + B1_Mus2 SINE Alu 2 140 -7 4 613 6737 65 21 43 chr15 3775342 3775955 -99719019 + L1_Mus2 LINE L1 5981 6565 -1 4 613 4204 118 24 70 chr15 3776403 3777190 -99717784 - RMER17A LTR ERVK 0 751 1 4 613 1495 221 29 223 chr15 3777385 3778143 -99716831 - RMER19C LTR ERVK 0 611 1 4 613 2093 260 103 60 chr15 3778943 3779090 -99715884 + Lx8 LINE L1 4812 4960 -887 4 613 2229 116 60 37 chr15 3779090 3779492 -99715482 + IAPLTR2a LTR ERVK 1 411 0 4 613 2191 277 107 48 chr15 3779492 3781141 -99713833 + Lx8 LINE L1 4961 6764 -709 4 613 339 239 178 7 chr15 3781168 3781303 -99713671 + Lx8 LINE L1 6747 6904 -569 4 613 1505 281 91 14 chr15 3781299 3781956 -99713018 - L1M3 LINE L1 -971 5169 4462 4 613 214 301 27 0 chr15 3781989 3782062 -99712912 + ID SINE ID 9 83 -141 4 613 1120 220 9 0 chr15 3782357 3782571 -99712403 + B3 SINE B2 1 216 0 4 613 359 224 56 9 chr15 3783078 3783186 -99711788 - Lx9 LINE L1 -10 7634 7522 4 613 423 56 0 0 chr15 3783204 3783258 -99711716 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 613 383 0 0 21 chr15 3783258 3783306 -99711668 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 613 6161 111 4 4 chr15 3785184 3786087 -99708887 - L1_Mus4 LINE L1 -2 6634 5732 4 613 4810 134 19 54 chr15 3786087 3786978 -99707996 - RLTR13A3 LTR ERVK 0 978 119 4 613 3097 126 21 0 chr15 3786992 3787469 -99707505 - L1_Mm LINE L1 -146 5737 5251 4 613 1683 156 40 9 chr15 3787458 3787781 -99707193 + L1_Mur1 LINE L1 4940 5272 -614 4 613 198 71 0 0 chr15 3787989 3788017 -99706957 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 613 470 349 16 0 chr15 3788103 3788232 -99706742 + B3A SINE B2 30 160 -38 4 613 345 62 0 0 chr15 3788236 3788284 -99706690 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 613 24 0 0 0 chr15 3788456 3788480 -99706494 + AT_rich Low_complexity Low_complexity 1 24 0 4 613 31 58 0 0 chr15 3788496 3788548 -99706426 + AT_rich Low_complexity Low_complexity 1 52 0 4 613 28459 130 45 15 chr15 3788801 3790251 -99704723 + L1Md_F2 LINE L1 319 1807 -4076 4 613 3149 99 15 6 chr15 3790251 3790718 -99704256 - L1Md_F2 LINE L1 -11 6571 6101 4 613 28459 90 24 32 chr15 3790718 3794520 -99700454 + L1Md_F2 LINE L1 1808 5585 -298 4 613 7182 85 8 9 chr15 3794521 3795506 -99699468 + L1Md_F2 LINE L1 5587 6570 -12 4 613 256 379 43 16 chr15 3795727 3795912 -99699062 - MIR SINE MIR -29 233 44 4 613 22 0 0 0 chr15 3795913 3795935 -99699039 + AT_rich Low_complexity Low_complexity 1 22 0 4 613 825 222 9 28 chr15 3796144 3796377 -99698597 - L1_Rod LINE L1 -3155 2692 2487 4 613 1851 243 88 8 chr15 3796379 3796857 -99698117 + RLTR11A LTR ERVK 1 516 -12 4 613 561 314 104 32 chr15 3797090 3797406 -99697568 - L2 LINE L2 -940 2479 2141 4 613 441 54 0 0 chr15 3797456 3797512 -99697462 + (TTGG)n Simple_repeat Simple_repeat 1 56 0 4 613 1054 268 36 40 chr15 3797568 3797871 -99697103 + MTD LTR MaLR 103 404 -15 4 613 1278 306 48 8 chr15 3798194 3798570 -99696404 - MTD LTR MaLR -13 406 16 4 613 287 246 105 16 chr15 3798591 3798715 -99696259 - MTD-int LTR MaLR -6 1252 1118 4 76 32539 85 6 7 chr15 3798716 3803890 -99691084 + L1Md_F2 LINE L1 422 5585 -298 4 614 7669 63 4 1 chr15 3803891 3804865 -99690109 + L1Md_F2 LINE L1 5587 6563 -19 4 614 1173 275 195 79 chr15 3804881 3804952 -99690022 - MTD-int LTR MaLR -123 1135 1044 4 614 1918 214 42 17 chr15 3804952 3805361 -99689613 - MTC LTR MaLR 0 421 3 4 614 1173 275 195 79 chr15 3805361 3806166 -99688808 - MTD-int LTR MaLR -215 1043 157 4 614 1157 281 94 69 chr15 3806174 3806714 -99688260 + MTC-int LTR MaLR 424 1385 -195 4 614 1021 203 10 15 chr15 3806714 3806914 -99688060 + MTC LTR MaLR 3 201 -220 4 614 481 325 100 29 chr15 3806984 3807295 -99687679 + L2 LINE L2 2145 2477 -942 4 614 1801 245 42 29 chr15 3807529 3807982 -99686992 - RLTR11A LTR ERVK -12 516 58 4 614 387 0 0 0 chr15 3807996 3808039 -99686935 + (A)n Simple_repeat Simple_repeat 1 43 0 4 614 640 252 30 51 chr15 3808052 3808286 -99686688 + L1_Rod LINE L1 2489 2717 -3130 4 614 21 89 0 0 chr15 3808362 3808418 -99686556 + AT_rich Low_complexity Low_complexity 1 56 0 4 614 299 372 52 11 chr15 3808525 3808699 -99686275 + MIR SINE MIR 54 234 -28 4 614 802 315 132 39 chr15 3808867 3809201 -99685773 + RMER5 LTR ERV1 4 357 -177 4 614 686 72 0 10 chr15 3809201 3809299 -99685675 + (TTTC)n Simple_repeat Simple_repeat 3 99 0 4 614 802 315 132 39 chr15 3809299 3809450 -99685524 + RMER5 LTR ERV1 358 534 0 4 614 6143 81 19 13 chr15 3809518 3809618 -99685356 - L1_Mus3 LINE L1 -8 6630 6517 4 614 3329 23 15 0 chr15 3809618 3810008 -99684966 - MTA_Mm LTR MaLR 0 396 1 4 614 6143 81 19 13 chr15 3810008 3810783 -99684191 - L1_Mus3 LINE L1 -122 6516 5750 4 614 1042 84 28 0 chr15 3811256 3811399 -99683575 - B1_Mus1 SINE Alu 0 148 2 4 614 513 0 0 0 chr15 3811427 3811484 -99683490 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 614 680 0 12 0 chr15 3811484 3811563 -99683411 + (TG)n Simple_repeat Simple_repeat 2 82 0 4 614 401 340 26 20 chr15 3811572 3811725 -99683249 - B3A SINE B2 -16 182 29 4 614 2894 53 0 0 chr15 3811768 3812127 -99682847 - L1_Mus1 LINE L1 0 6567 6209 4 614 207 69 0 0 chr15 3812209 3812238 -99682736 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 614 487 296 97 40 chr15 3812290 3812568 -99682406 + L1M2 LINE L1 5476 5769 -531 4 614 334 310 61 49 chr15 3813007 3813194 -99681780 + MIRc SINE MIR 40 227 -35 4 614 29054 84 3 6 chr15 3815353 3820082 -99674892 - L1Md_F2 LINE L1 -10 6572 1861 4 614 533 312 33 33 chr15 3820279 3820491 -99674483 + MER20 DNA MER1_type 2 213 -6 4 614 680 295 125 26 chr15 3821227 3821853 -99673121 + L1M2 LINE L1 2903 3590 -2553 4 614 887 146 0 8 chr15 3821874 3822005 -99672969 - B3 SINE B2 -86 130 1 4 614 571 317 113 27 chr15 3822030 3822543 -99672431 + L1M2 LINE L1 3580 4136 -2007 4 614 225 364 50 20 chr15 3823801 3824003 -99670971 - L2a LINE L2 -12 3414 3207 4 614 464 50 17 0 chr15 3824013 3824073 -99670901 + L1Md_F2 LINE L1 5792 5852 -730 4 614 243 146 0 0 chr15 3824091 3824132 -99670842 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 4 614 6094 92 18 18 chr15 3824132 3825045 -99669929 - Lx2 LINE L1 -7 6990 6078 4 614 247 259 24 12 chr15 3825093 3825175 -99669799 + L1MA5 LINE L1 6190 6272 -28 4 614 1788 45 0 0 chr15 3825281 3825502 -99669472 - L1Md_T LINE L1 0 6582 6362 4 614 311 302 45 30 chr15 3825516 3825649 -99669325 - Charlie5 DNA MER1_type -2489 135 1 4 614 225 0 0 0 chr15 3825794 3825819 -99669155 + (A)n Simple_repeat Simple_repeat 1 25 0 4 614 764 215 0 7 chr15 3826570 3826715 -99668259 - B1_Mus2 SINE Alu -2 145 2 4 614 351 0 0 0 chr15 3829439 3829478 -99665496 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 614 265 270 26 39 chr15 3829501 3829578 -99665396 - B4A SINE B4 0 292 217 4 614 362 255 57 0 chr15 3829583 3829689 -99665285 - Lx7 LINE L1 0 7696 7585 4 614 614 300 115 10 chr15 3829693 3829708 -99665266 - B4A SINE B4 -59 233 218 4 614 252 77 0 0 chr15 3829708 3829747 -99665227 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 614 614 300 115 10 chr15 3829747 3829940 -99665034 - B4A SINE B4 -75 217 3 4 614 7740 93 32 7 chr15 3830079 3831758 -99663216 + L1Md_F2 LINE L1 586 2310 -3573 4 614 36617 40 5 6 chr15 3831760 3838147 -99656827 - L1Md_A LINE L1 -2 6580 207 4 614 22395 89 1 3 chr15 3838145 3841443 -99653531 + L1Md_F2 LINE L1 2296 5586 -297 4 614 7402 70 8 5 chr15 3841444 3842422 -99652552 + L1Md_F2 LINE L1 5588 6568 -14 4 614 24242 48 63 2 chr15 3843197 3844507 -99650467 - L1Md_F3 LINE L1 -14 6570 5252 4 614 3064 67 20 5 chr15 3844507 3844912 -99650062 - RLTR10A LTR ERVK 0 411 1 4 614 24242 80 159 8 chr15 3844912 3848987 -99645987 - L1Md_F3 LINE L1 -632 5251 435 4 614 333 344 0 8 chr15 3850466 3850598 -99644376 + GA-rich Low_complexity Low_complexity 2 132 0 4 614 603 149 0 0 chr15 3850600 3850707 -99644267 + (GGGAA)n Simple_repeat Simple_repeat 5 111 0 4 614 1250 83 0 11 chr15 3850712 3850894 -99644080 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 4 614 1677 205 86 37 chr15 3850956 3851621 -99643353 + Lx7 LINE L1 6965 7696 0 4 614 411 264 111 75 chr15 3851631 3851938 -99643036 + L1MB3 LINE L1 5585 5902 -281 4 614 270 0 0 0 chr15 3851971 3852001 -99642973 + (TC)n Simple_repeat Simple_repeat 1 30 0 4 614 495 33 0 0 chr15 3852001 3852061 -99642913 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 614 1117 133 105 33 chr15 3853113 3853323 -99641651 - URR1A DNA MER1_type 0 226 2 4 614 6239 101 22 19 chr15 3853440 3854417 -99640557 - Lx3_Mus LINE L1 -5 7004 6025 4 614 216 273 0 0 chr15 3854617 3854683 -99640291 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 614 351 0 0 0 chr15 3855431 3855470 -99639504 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 4 614 393 309 133 29 chr15 3855470 3855643 -99639331 + LTR90A LTR LTR 775 965 -11 4 614 4698 279 81 36 chr15 3857397 3857634 -99637340 + Lx9 LINE L1 6071 6460 -1184 4 614 310 21 43 0 chr15 3857634 3857681 -99637293 + (CAAAA)n Simple_repeat Simple_repeat 1 49 0 4 614 4698 205 71 49 chr15 3857681 3858826 -99636148 + Lx9 LINE L1 6461 7644 0 4 614 22 56 0 0 chr15 3859098 3859134 -99635840 + AT_rich Low_complexity Low_complexity 1 36 0 4 614 593 271 112 12 chr15 3859716 3859974 -99635000 + L1M2 LINE L1 4689 4972 -1171 4 614 1788 153 99 8 chr15 3859965 3860347 -99634627 - Lx5 LINE L1 -1012 6038 5622 4 614 972 99 0 27 chr15 3860525 3860671 -99634303 + B1_Mm SINE Alu 5 146 -1 4 614 3202 259 84 23 chr15 3860743 3861933 -99633041 - Lx9 LINE L1 0 7644 6382 4 614 395 248 15 83 chr15 3862121 3862253 -99632721 - Lx9 LINE L1 -1189 6455 6333 4 614 213 39 0 0 chr15 3862342 3862368 -99632606 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 4 614 1061 98 0 32 chr15 3862369 3862527 -99632447 - B2_Mm2 SINE B2 -41 154 2 4 614 760 112 7 29 chr15 3862807 3862945 -99632029 - Lx4A LINE L1 -1217 5841 5707 5 614 291 178 0 0 chr15 3862990 3863035 -99631939 + ID_B1 SINE B4 171 215 -9 5 614 491 99 0 0 chr15 3863384 3863465 -99631509 + L1Md_F2 LINE L1 6501 6581 -1 5 614 230 264 76 15 chr15 3863750 3863881 -99631093 + L1MC LINE L1 2975 3113 -3033 5 614 407 340 35 69 chr15 3863936 3864110 -99630864 + B4 SINE B4 3 170 -122 5 614 245 286 58 42 chr15 3864201 3864460 -99630514 + L1MC LINE L1 3181 3443 -2703 5 614 222 283 192 0 chr15 3864490 3864589 -99630385 + PB1 SINE Alu 8 125 -2 5 614 313 281 25 0 chr15 3864592 3864713 -99630261 + L1MC LINE L1 3492 3615 -2531 5 614 33625 75 3 4 chr15 3864723 3870316 -99624658 + L1Md_F3 LINE L1 441 6020 -564 5 614 33738 36 1 0 chr15 3870314 3876157 -99618817 + L1Md_T LINE L1 1 5589 -297 5 614 8996 7 0 0 chr15 3876157 3877153 -99617821 + L1Md_T LINE L1 5590 6585 0 5 614 4514 48 7 3 chr15 3877169 3877733 -99617241 + L1Md_F3 LINE L1 6005 6570 -14 5 614 826 263 55 44 chr15 3877844 3878234 -99616740 + L1MC LINE L1 3599 3983 -2163 5 614 273 274 0 0 chr15 3878241 3878303 -99616671 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 614 256 24 24 24 chr15 3878647 3878689 -99616285 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 5 614 1005 148 55 41 chr15 3878835 3879054 -99615920 - Lx LINE L1 0 6654 6433 5 614 356 82 16 0 chr15 3880590 3880651 -99614323 + (CAAAA)n Simple_repeat Simple_repeat 2 63 0 5 614 223 93 23 23 chr15 3881086 3881130 -99613844 + (GGGAGA)n Simple_repeat Simple_repeat 3 46 0 5 614 452 336 0 0 chr15 3881138 3881242 -99613732 - RSINE1 SINE B4 -59 106 3 5 614 585 0 0 0 chr15 3881308 3881373 -99613601 + (TC)n Simple_repeat Simple_repeat 2 66 0 5 614 282 53 0 0 chr15 3881373 3881411 -99613563 - B1_Mm SINE Alu -1 146 109 5 614 1771 148 72 0 chr15 3881699 3882003 -99612971 - MTC LTR MaLR -95 326 1 5 614 2564 261 26 16 chr15 3882003 3882734 -99612240 + Lx9 LINE L1 6703 7440 -204 5 614 3250 108 241 2 chr15 3883292 3883839 -99611135 + RLTR33 LTR ERVK 1 678 0 5 614 26 30 0 0 chr15 3883962 3883995 -99610979 + AT_rich Low_complexity Low_complexity 1 33 0 5 614 180 0 0 0 chr15 3884242 3884262 -99610712 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 614 357 43 0 0 chr15 3884713 3884760 -99610214 + (GA)n Simple_repeat Simple_repeat 1 47 0 5 614 244 356 94 20 chr15 3885174 3885323 -99609651 + MER58A DNA MER1_type 5 164 -60 5 614 4834 9 2 0 chr15 3885323 3885897 -99609077 - L1_Mm LINE L1 -175 5708 5134 5 614 1811 45 0 5 chr15 3885897 3886121 -99608853 + L1Md_T LINE L1 6360 6582 0 5 614 712 185 146 5 chr15 3886763 3886948 -99608026 - B3 SINE B2 -4 212 2 5 614 29 28 0 0 chr15 3887082 3887118 -99607856 + AT_rich Low_complexity Low_complexity 1 36 0 5 614 385 207 120 8 chr15 3887165 3887282 -99607692 + RLTR15 LTR ERVK 1 130 -229 5 614 243 300 72 61 chr15 3887316 3887579 -99607395 + RLTR15 LTR ERVK 84 349 -10 5 614 486 0 0 0 chr15 3888124 3888178 -99606796 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 5 614 239 255 175 78 chr15 3888291 3888457 -99606517 - RMER30 DNA MER1_type -10 192 11 5 614 2156 93 26 7 chr15 3889639 3889942 -99605032 + RLTR27 LTR ERVK 1 309 0 5 614 372 54 5 8 chr15 3889967 3890020 -99604954 + RLTR10-int LTR ERVK 163 267 -7314 5 614 680 232 49 16 chr15 3890054 3890238 -99604736 + RLTR10-int LTR ERVK 655 844 -1143 5 614 219 250 0 59 chr15 3890249 3890317 -99604657 + GA-rich Low_complexity Low_complexity 2 65 0 5 614 3725 311 44 33 chr15 3890637 3893121 -99601853 + IAP-d-int LTR ERVK 705 3120 -3422 5 614 6937 61 1 26 chr15 3893213 3894906 -99600068 + L1Md_A LINE L1 520 2161 -3722 5 614 33751 40 3 9 chr15 3894905 3900087 -99594887 + L1Md_F2 LINE L1 441 5586 -297 5 614 7891 53 1 9 chr15 3900087 3901089 -99593885 + L1Md_F2 LINE L1 5587 6580 -2 5 614 2468 302 37 41 chr15 3901090 3902869 -99592105 + IAP-d-int LTR ERVK 3706 5477 -2104 5 614 282 305 0 0 chr15 3903400 3903505 -99591469 + IAP-d-int LTR ERVK 6965 7069 -512 5 614 1328 165 0 65 chr15 3903640 3903918 -99591056 + IAP-d-int LTR ERVK 7321 7580 -1 5 614 2244 107 3 3 chr15 3903925 3904234 -99590740 + RLTR27 LTR ERVK 1 309 0 5 614 983 246 123 11 chr15 3905217 3905539 -99589435 - ORR1D1 LTR MaLR -1 378 1 5 614 1792 125 3 49 chr15 3905588 3905941 -99589033 + Lx3_Mus LINE L1 5893 6237 -772 5 614 2886 30 0 3 chr15 3906392 3906730 -99588244 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 614 856 172 21 0 chr15 3907195 3907340 -99587634 + B1_Mur2 SINE Alu 2 149 0 5 614 215 297 0 86 chr15 3908005 3908086 -99586888 + PB1D10 SINE Alu 41 114 -3 5 614 344 328 175 12 chr15 3908765 3909107 -99585867 + L1MC4 LINE L1 2146 2543 -3672 5 614 350 379 17 22 chr15 3909815 3909996 -99584978 - MIR SINE MIR -6 256 77 5 614 948 281 87 17 chr15 3910020 3910364 -99584610 + ORR1D2 LTR MaLR 3 370 0 5 614 228 67 0 0 chr15 3911259 3911289 -99583685 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 5 614 2271 189 39 54 chr15 3911955 3912491 -99582483 - RMER19B LTR ERVK 0 902 375 5 614 4965 101 22 73 chr15 3912493 3913339 -99581635 + RLTR13B4 LTR ERVK 1 803 0 5 614 1181 217 57 88 chr15 3913346 3913730 -99581244 - RMER19B LTR ERVK -530 372 1 5 614 274 205 45 11 chr15 3913812 3913914 -99581060 + L1MC4 LINE L1 3411 3515 -2699 5 614 339 82 66 0 chr15 3914055 3914116 -99580858 + L1_Mus3 LINE L1 6568 6632 -6 5 614 27 49 0 0 chr15 3914118 3914159 -99580815 + AT_rich Low_complexity Low_complexity 1 41 0 5 614 456 299 84 28 chr15 3914328 3914507 -99580467 - MER3 DNA MER1_type -18 191 3 5 614 6776 33 0 0 chr15 3915866 3916662 -99578312 - L1Md_T LINE L1 -1 6581 5786 5 614 581 231 64 43 chr15 3916943 3917223 -99577751 + L1M2 LINE L1 2631 2916 -3227 5 614 447 210 0 0 chr15 3917247 3917347 -99577627 + GA-rich Low_complexity Low_complexity 3 102 0 5 614 454 19 0 0 chr15 3917347 3917399 -99577575 + (GA)n Simple_repeat Simple_repeat 2 53 0 5 614 701 106 0 9 chr15 3917399 3917513 -99577461 + (GGAA)n Simple_repeat Simple_repeat 4 116 0 5 614 471 18 0 0 chr15 3917572 3917628 -99577346 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 614 447 254 228 21 chr15 3917669 3917845 -99577129 + L1M2 LINE L1 3031 3244 -2899 5 614 797 159 7 0 chr15 3917845 3917983 -99576991 + B1_Mur2 SINE Alu 1 139 -10 5 614 486 49 0 0 chr15 3917984 3918045 -99576929 + (TAAA)n Simple_repeat Simple_repeat 4 64 0 5 614 447 254 228 21 chr15 3918045 3918103 -99576871 + L1M2 LINE L1 3245 3316 -2827 5 614 258 319 118 25 chr15 3918499 3918618 -99576356 + ORR1E LTR MaLR 20 149 -210 5 614 230 235 60 24 chr15 3918724 3918807 -99576167 + ORR1E LTR MaLR 294 379 0 5 614 430 217 0 11 chr15 3919560 3919653 -99575321 + B1F SINE Alu 18 109 -40 5 614 180 0 0 0 chr15 3920484 3920504 -99574470 + (T)n Simple_repeat Simple_repeat 1 20 0 5 614 185 222 18 53 chr15 3920701 3920758 -99574216 - L4 LINE RTE 0 2029 1975 5 614 378 0 0 0 chr15 3921244 3921286 -99573688 + (T)n Simple_repeat Simple_repeat 1 42 0 5 614 180 125 0 0 chr15 3921737 3921769 -99573205 + (TAA)n Simple_repeat Simple_repeat 2 33 0 5 614 204 40 0 0 chr15 3922360 3922385 -99572589 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 5 614 21 57 0 0 chr15 3922796 3922831 -99572143 + AT_rich Low_complexity Low_complexity 1 35 0 5 614 414 198 197 8 chr15 3922836 3922958 -99572016 - L1M2 LINE L1 -1632 4511 4367 5 614 2179 35 0 0 chr15 3922958 3923216 -99571758 - L1Md_T LINE L1 0 6582 6325 5 614 222 37 0 0 chr15 3923942 3923969 -99571005 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 614 582 15 0 0 chr15 3923969 3924035 -99570939 + (GA)n Simple_repeat Simple_repeat 1 67 0 5 614 1472 201 134 44 chr15 3924036 3924379 -99570595 - ORR1D1 LTR MaLR 0 374 1 5 614 197 33 0 32 chr15 3924723 3924754 -99570220 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 5 614 1096 53 0 0 chr15 3924754 3924887 -99570087 - B1_Mus2 SINE Alu -13 134 2 5 614 25 51 0 0 chr15 3925529 3925568 -99569406 + AT_rich Low_complexity Low_complexity 1 39 0 5 614 449 321 106 21 chr15 3926294 3926482 -99568492 + MER20 DNA MER1_type 14 217 -2 5 614 638 271 13 7 chr15 3926682 3926834 -99568140 + RSINE1 SINE B4 13 165 0 5 614 23 0 0 0 chr15 3927350 3927373 -99567601 + AT_rich Low_complexity Low_complexity 1 23 0 5 614 1129 84 41 18 chr15 3928336 3928491 -99566483 + B2_Mm2 SINE B2 4 164 -31 5 614 180 0 0 0 chr15 3928491 3928511 -99566463 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 5 614 1129 84 41 18 chr15 3928511 3928524 -99566450 + B2_Mm2 SINE B2 165 176 -19 5 614 375 23 0 0 chr15 3928734 3928778 -99566196 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 5 614 321 295 160 18 chr15 3929963 3930132 -99564842 - B3A SINE B2 -5 193 1 5 614 278 214 165 0 chr15 3930252 3930355 -99564619 + RMER5 LTR ERV1 353 472 -62 5 614 716 225 57 45 chr15 3931615 3931818 -99563156 + B3A SINE B2 9 214 -2 5 614 301 333 48 0 chr15 3931832 3931937 -99563037 - MIR SINE MIR -146 116 7 5 615 217 321 0 0 chr15 3933284 3933340 -99561634 + L2a LINE L2 3355 3410 -16 5 615 30 0 0 0 chr15 3935622 3935652 -99559322 + AT_rich Low_complexity Low_complexity 1 30 0 5 615 198 0 0 0 chr15 3936836 3936858 -99558116 + (A)n Simple_repeat Simple_repeat 1 22 0 5 615 401 264 72 28 chr15 3936969 3937111 -99557863 + B1F SINE Alu 5 149 0 5 615 1179 162 80 216 chr15 3937268 3937708 -99557266 + ORR1C2 LTR MaLR 3 382 -2 5 615 226 245 56 12 chr15 3938131 3938208 -99556766 + B3A SINE B2 119 202 -14 5 615 228 135 0 0 chr15 3938214 3938251 -99556723 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 615 301 287 78 85 chr15 3938298 3938309 -99556665 - MT2B LTR ERVL -304 297 246 5 615 670 200 17 0 chr15 3938309 3938424 -99556550 - B1_Mur2 SINE Alu -22 127 11 5 615 301 287 78 85 chr15 3938424 3938439 -99556535 - MT2B LTR ERVL -304 245 158 5 615 21 0 0 0 chr15 3939954 3939975 -99554999 + AT_rich Low_complexity Low_complexity 1 21 0 5 615 369 250 0 0 chr15 3940261 3940329 -99554645 + RSINE1 SINE B4 1 68 -97 5 615 774 251 55 33 chr15 3940329 3940682 -99554292 + BGLII_B LTR ERVK 201 553 0 5 615 432 315 0 11 chr15 3940684 3940777 -99554197 + RSINE1 SINE B4 72 163 -2 5 615 532 231 92 0 chr15 3941085 3941215 -99553759 + B1_Mur1 SINE Alu 1 142 -7 5 615 553 185 59 44 chr15 3941451 3941587 -99553387 - B1_Mur1 SINE Alu -10 139 2 5 615 277 264 0 14 chr15 3942199 3942272 -99552702 + B4A SINE B4 215 286 -6 5 615 216 179 0 0 chr15 3942928 3942967 -99552007 - B4A SINE B4 -243 49 11 6 615 528 244 250 0 chr15 3943276 3943448 -99551526 + B3 SINE B2 2 216 0 6 615 321 47 0 0 chr15 3945246 3945289 -99549685 + (A)n Simple_repeat Simple_repeat 1 43 0 6 615 329 238 46 28 chr15 3946948 3947056 -99547918 + PB1D7 SINE Alu 9 118 -2 6 615 423 267 137 0 chr15 3947138 3947269 -99547705 + B3 SINE B2 64 212 -4 6 615 25 31 0 0 chr15 3947824 3947856 -99547118 + AT_rich Low_complexity Low_complexity 1 32 0 6 615 232 271 17 0 chr15 3948614 3948673 -99546301 - LTR41 LTR ERVL -230 538 479 6 615 809 186 139 35 chr15 3948745 3948807 -99546167 - URR1A DNA MER1_type 0 226 164 6 615 3847 140 65 21 chr15 3948807 3949470 -99545504 - RLTR17 LTR ERVK 0 692 1 6 615 809 186 139 35 chr15 3949470 3949608 -99545366 - URR1A DNA MER1_type -63 163 5 6 615 241 350 0 30 chr15 3949584 3949684 -99545290 - LTR41 LTR ERVL -327 441 345 6 615 497 322 123 9 chr15 3949753 3949972 -99545002 - LTR41 LTR ERVL -522 246 3 6 615 329 375 21 10 chr15 3950242 3950436 -99544538 + MIRb SINE MIR 20 215 -53 6 615 831 286 116 49 chr15 3950699 3951269 -99543705 + L1MD2 LINE L1 5783 6359 0 6 615 212 163 0 0 chr15 3952741 3952784 -99542190 + T-rich Low_complexity Low_complexity 1 43 0 6 615 302 143 52 0 chr15 3952918 3952995 -99541979 + (TA)n Simple_repeat Simple_repeat 1 81 0 6 615 386 280 0 0 chr15 3953020 3953113 -99541861 + B3 SINE B2 60 152 -64 6 615 1909 165 41 33 chr15 3953114 3953503 -99541471 + ORR1B1 LTR MaLR 3 394 0 6 615 226 194 15 15 chr15 3953526 3953594 -99541380 + (TA)n Simple_repeat Simple_repeat 2 69 0 6 615 912 104 0 0 chr15 3953625 3953759 -99541215 + (TTCC)n Simple_repeat Simple_repeat 3 136 0 6 615 260 70 23 0 chr15 3953761 3953804 -99541170 + (GTTTG)n Simple_repeat Simple_repeat 2 45 0 6 615 579 195 80 16 chr15 3953806 3953931 -99541043 - B1_Mus1 SINE Alu -15 133 1 6 615 2408 199 186 63 chr15 3953946 3954359 -99540615 - Lx9 LINE L1 -1 7643 7157 6 615 1248 120 6 0 chr15 3954359 3954542 -99540432 - B2_Mm2 SINE B2 -7 188 5 6 615 2408 199 186 63 chr15 3954542 3954785 -99540189 - Lx9 LINE L1 -488 7156 6899 6 615 1861 155 233 25 chr15 3954785 3954860 -99540114 - RLTR12B LTR ERVK 0 528 443 6 615 270 81 0 0 chr15 3954860 3954897 -99540077 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 6 615 1861 155 233 25 chr15 3954897 3955258 -99539716 - RLTR12B LTR ERVK -86 442 2 6 615 2408 199 186 63 chr15 3955258 3955282 -99539692 - Lx9 LINE L1 -746 6898 6878 6 615 4538 55 5 17 chr15 3955312 3955888 -99539086 - RLTR44-int LTR ERVK 0 2812 2244 6 615 486 253 47 53 chr15 3955916 3956176 -99538798 - IAPEz-int LTR ERVK -3879 3801 3507 6 615 3507 120 5 48 chr15 3956235 3956843 -99538131 - RLTR44-int LTR ERVK -1473 1339 798 6 615 723 144 17 0 chr15 3956844 3956962 -99538012 - RLTR44-int LTR ERVK -1882 930 811 6 615 1297 86 20 2 chr15 3956983 3957166 -99537808 - Lx9 LINE L1 -1816 5828 5644 6 615 304 195 16 33 chr15 3957281 3957373 -99537601 - MTEb LTR MaLR -2 372 278 6 615 2019 154 58 22 chr15 3957445 3957809 -99537165 - RLTR14 LTR ERV1 -3 379 3 6 615 744 315 67 51 chr15 3958374 3958926 -99536048 + L1MB7 LINE L1 5623 6183 -1 6 615 441 0 0 0 chr15 3959157 3959206 -99535768 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 615 1079 257 62 88 chr15 3960725 3960833 -99534141 - RLTR12B LTR ERVK -5 522 413 6 615 3202 63 8 0 chr15 3960833 3961230 -99533744 - MTB LTR MaLR 0 400 1 6 615 1079 231 39 90 chr15 3961230 3961636 -99533338 - RLTR12B LTR ERVK -105 423 42 6 615 1092 177 75 14 chr15 3961798 3962010 -99532964 - URR1A DNA MER1_type -1 225 1 6 615 27 29 0 0 chr15 3962091 3962125 -99532849 + AT_rich Low_complexity Low_complexity 1 34 0 6 615 235 310 0 0 chr15 3962300 3962358 -99532616 + (CATA)n Simple_repeat Simple_repeat 3 60 0 6 615 243 240 66 81 chr15 3962421 3962557 -99532417 - Lx9 LINE L1 -195 7449 7316 6 615 354 324 76 52 chr15 3962573 3962792 -99532182 - ORR1E LTR MaLR -145 214 1 6 615 306 180 0 0 chr15 3962976 3963037 -99531937 + CT-rich Low_complexity Low_complexity 3 63 0 6 615 1164 134 41 0 chr15 3963038 3963210 -99531764 - B2_Mm2 SINE B2 -16 179 1 6 615 305 275 41 123 chr15 3964353 3964411 -99530563 - L1MB1 LINE L1 -100 6068 6008 6 615 2379 153 0 31 chr15 3964411 3964803 -99530171 - RLTR14 LTR ERV1 0 382 3 6 615 305 275 41 123 chr15 3964803 3964939 -99530035 - L1MB1 LINE L1 -161 6007 5890 6 615 2108 120 6 0 chr15 3965132 3965457 -99529517 - ORR1A2 LTR MaLR 0 327 1 6 615 524 265 11 27 chr15 3965717 3965882 -99529092 - L1MB1 LINE L1 -332 5824 5657 6 615 2068 131 0 78 chr15 3966926 3967283 -99527691 - ORR1A4 LTR MaLR 0 329 1 6 615 1289 20 0 0 chr15 3967704 3967851 -99527123 - B1_Mm SINE Alu 0 147 1 6 615 306 0 0 0 chr15 3968210 3968244 -99526730 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 615 543 195 69 139 chr15 3968303 3968505 -99526469 + RMER13A LTR ERVK 5 192 -716 6 615 1820 144 25 6 chr15 3968556 3968877 -99526097 + RMER13A LTR ERVK 164 490 -370 6 615 747 216 169 14 chr15 3968875 3969082 -99525892 + RMER13A LTR ERVK 618 856 -4 6 615 289 151 99 55 chr15 3969179 3969236 -99525738 - MTEb LTR MaLR 0 379 319 6 615 299 196 0 0 chr15 3969236 3969287 -99525687 + B3 SINE B2 1 51 -165 6 615 953 208 38 47 chr15 3969680 3969892 -99525082 - B3 SINE B2 -4 212 3 6 615 459 235 0 9 chr15 3970381 3970497 -99524477 + MLT1A0 LTR MaLR 35 149 -216 6 615 1041 229 103 16 chr15 3970557 3970877 -99524097 - MER57C2 LTR ERV1 0 434 87 6 615 344 308 46 40 chr15 3971033 3971064 -99523910 + B4 SINE B4 56 87 -205 6 615 682 139 0 39 chr15 3971064 3971191 -99523783 + B1_Mus1 SINE Alu 3 124 -24 6 615 1037 258 63 16 chr15 3971243 3971558 -99523416 - ORR1D2 LTR MaLR -40 330 1 6 615 1607 240 61 12 chr15 3971558 3971967 -99523007 - ORR1D2-int LTR MaLR 0 1370 942 6 615 1916 286 88 50 chr15 3972418 3973329 -99521645 - ORR1D2-int LTR MaLR -425 945 1 6 615 431 221 0 31 chr15 3973340 3973438 -99521536 - ORR1D2 LTR MaLR -18 352 258 6 615 413 160 48 29 chr15 3974328 3974431 -99520543 + B1F SINE Alu 18 122 -27 6 615 538 221 86 11 chr15 3975273 3975408 -99519566 - RSINE1 SINE B4 -17 148 2 6 615 224 233 77 64 chr15 3975720 3975798 -99519176 + B1F SINE Alu 68 146 -3 6 615 261 0 0 0 chr15 3977036 3977065 -99517909 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 6 615 221 0 0 33 chr15 3977648 3977678 -99517296 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 6 615 417 255 9 43 chr15 3978782 3978897 -99516077 - PB1D10 SINE Alu 0 117 7 6 615 376 245 7 13 chr15 3978910 3979059 -99515915 + CT-rich Low_complexity Low_complexity 1 148 0 6 615 262 56 26 78 chr15 3979339 3979416 -99515558 + A-rich Low_complexity Low_complexity 6 78 0 6 615 1160 22 7 0 chr15 3979417 3979553 -99515421 + B1_Mm SINE Alu 1 137 -10 6 615 342 0 0 0 chr15 3979553 3979591 -99515383 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 6 615 375 267 49 57 chr15 3979760 3979883 -99515091 + RSINE1 SINE B4 23 144 -21 6 615 276 77 0 0 chr15 3979902 3979941 -99515033 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 615 197 65 0 31 chr15 3979941 3979972 -99515002 + (TA)n Simple_repeat Simple_repeat 1 31 0 6 615 533 146 37 33 chr15 3980041 3980314 -99514660 + (TA)n Simple_repeat Simple_repeat 1 274 0 6 615 421 266 73 0 chr15 3980884 3980993 -99513981 - ID_B1 SINE B4 -5 219 103 6 615 432 0 0 0 chr15 3981272 3981320 -99513654 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 615 342 307 20 10 chr15 3981524 3981626 -99513348 + PB1 SINE Alu 12 114 -13 6 615 212 130 0 61 chr15 3982066 3982115 -99512859 + (CATG)n Simple_repeat Simple_repeat 1 46 0 6 615 510 214 33 25 chr15 3982188 3982308 -99512666 - B3A SINE B2 -73 125 5 6 615 326 220 0 0 chr15 3982370 3982429 -99512545 - ID4_ SINE ID -20 63 5 6 615 496 84 12 12 chr15 3982464 3982548 -99512426 + (TCTCTG)n Simple_repeat Simple_repeat 2 85 0 6 615 471 18 0 0 chr15 3983154 3983210 -99511764 + (CTCA)n Simple_repeat Simple_repeat 2 57 0 6 615 237 211 88 50 chr15 3983832 3983912 -99511062 - MLT1A1 LTR MaLR -18 390 308 6 615 198 0 0 0 chr15 3984599 3984621 -99510353 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 6 615 651 133 208 0 chr15 3984621 3984733 -99510241 - B1_Mus2 SINE Alu -8 139 3 6 615 625 253 185 18 chr15 3984911 3985197 -99509777 + L1MA8 LINE L1 5952 6285 -6 6 615 624 89 33 0 chr15 3986112 3986202 -99508772 + RMER6C LTR ERVK 1 93 -597 6 615 1325 219 58 82 chr15 3986206 3986885 -99508089 + RMER6C LTR ERVK 200 720 0 6 615 476 270 68 92 chr15 3987261 3987353 -99507621 + Lx9 LINE L1 7367 7456 -188 6 615 207 0 0 0 chr15 3987353 3987376 -99507598 + (CCTG)n Simple_repeat Simple_repeat 1 23 0 6 615 476 270 68 92 chr15 3987376 3987456 -99507518 + Lx9 LINE L1 7457 7517 -127 6 615 1045 75 23 11 chr15 3987456 3987631 -99507343 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 6 615 476 270 68 92 chr15 3987631 3987706 -99507268 + Lx9 LINE L1 7518 7609 -35 6 615 238 369 0 59 chr15 3987836 3987954 -99507020 + PB1D10 SINE Alu 1 111 -6 6 615 269 316 13 0 chr15 3988015 3988091 -99506883 - ID4 SINE ID -6 77 1 6 615 256 314 39 0 chr15 3988107 3988209 -99506765 - B1F SINE Alu -8 141 36 6 615 28 61 0 0 chr15 3988352 3988401 -99506573 + AT_rich Low_complexity Low_complexity 1 49 0 6 615 827 311 26 19 chr15 3988933 3989241 -99505733 - RMER15 LTR ERVL -3 572 263 6 615 271 218 42 84 chr15 3989224 3989319 -99505655 - RMER15 LTR ERVL -415 160 70 6 615 423 146 0 68 chr15 3990297 3990385 -99504589 - B1_Mur3 SINE Alu 0 149 68 6 615 507 189 54 9 chr15 3990364 3990476 -99504498 - B1_Mur3 SINE Alu -32 117 1 6 615 723 54 0 0 chr15 3990759 3990851 -99504123 + (GAAA)n Simple_repeat Simple_repeat 4 95 0 6 615 231 213 0 21 chr15 3992330 3992378 -99502596 + CT-rich Low_complexity Low_complexity 1 47 0 6 615 314 320 109 39 chr15 3992400 3992956 -99502018 - L2a LINE L2 -104 3322 2727 6 615 244 220 0 33 chr15 3993217 3993278 -99501696 + GA-rich Low_complexity Low_complexity 1 59 0 6 615 620 119 8 0 chr15 3993601 3993719 -99501255 + (GA)n Simple_repeat Simple_repeat 2 120 0 6 615 499 189 9 18 chr15 3994834 3994947 -99500027 - Lx5 LINE L1 0 7050 6939 6 615 445 326 76 62 chr15 3995017 3995531 -99499443 - L1ME3A LINE L1 -34 6139 5619 6 615 246 128 0 0 chr15 3995558 3995597 -99499377 + (TTA)n Simple_repeat Simple_repeat 1 39 0 6 615 240 329 24 0 chr15 3995861 3995943 -99499031 + PB1D10 SINE Alu 31 114 -3 6 615 3695 90 13 9 chr15 3996075 3996602 -99498372 + L1_Mus4 LINE L1 6101 6629 -7 6 615 579 182 9 0 chr15 3997105 3997215 -99497759 - B1_Mus1 SINE Alu -9 139 29 7 615 195 42 0 0 chr15 3998820 3998844 -99496130 + (TTA)n Simple_repeat Simple_repeat 1 24 0 7 615 399 41 0 0 chr15 3998844 3998893 -99496081 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 615 395 240 30 0 chr15 3998903 3999003 -99495971 - RSINE1 SINE B4 -20 145 43 7 615 1641 167 51 9 chr15 3999008 3999340 -99495634 - ORR1D1 LTR MaLR 0 374 29 7 615 1144 174 266 8 chr15 3999341 3999667 -99495307 - ORR1B1 LTR MaLR -8 386 1 7 615 397 266 70 9 chr15 3999841 3999955 -99495019 - B1F1 SINE Alu -5 144 24 7 615 292 116 0 0 chr15 3999957 4000000 -99494974 + L1_Mur2 LINE L1 4682 4724 -1153 7 615 384 104 11 144 chr15 4000001 4000091 -99494883 + L1_Mur2 LINE L1 4726 4803 -1074 1 615 1894 216 48 17 chr15 4000128 4000608 -99494366 - RLTR17 LTR ERVK -73 619 125 2 615 7462 103 3 9 chr15 4000661 4001719 -99493255 + L1_Mur2 LINE L1 4797 5847 -30 3 615 2138 113 3 3 chr15 4001728 4002057 -99492917 + ORR1A1 LTR MaLR 10 338 -8 4 615 7672 130 16 8 chr15 4002061 4003260 -99491714 + Lx4A LINE L1 5849 7056 -2 5 615 1462 149 32 0 chr15 4004228 4004476 -99490498 + Lx2 LINE L1 6742 6997 0 6 615 213 39 0 0 chr15 4005095 4005121 -99489853 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 615 203 307 26 9 chr15 4005592 4005707 -99489267 - L2 LINE L2 -681 2738 2622 8 615 231 36 0 0 chr15 4006300 4006328 -99488646 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 9 615 251 267 45 12 chr15 4006358 4006451 -99488523 - B1F SINE Alu -46 103 8 1 615 194 0 39 0 chr15 4006988 4007014 -99487960 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 615 796 221 98 25 chr15 4007982 4008186 -99486788 + ID_B1 SINE B4 2 220 -4 1 615 1170 76 0 0 chr15 4008693 4008838 -99486136 + B1_Mus2 SINE Alu 3 147 0 1 615 24 0 0 0 chr15 4008868 4008892 -99486082 + AT_rich Low_complexity Low_complexity 1 24 0 1 615 241 266 31 0 chr15 4009520 4009584 -99485390 - ID4 SINE ID -11 72 7 1 615 1321 156 24 20 chr15 4011171 4011420 -99483554 - MTD LTR MaLR 0 419 170 1 615 635 227 16 0 chr15 4011486 4011614 -99483360 + B3 SINE B2 23 152 -64 1 615 512 291 36 98 chr15 4012117 4012311 -99482663 + B3 SINE B2 7 188 -28 1 615 257 268 162 28 chr15 4015188 4015330 -99479644 - L2a LINE L2 -40 3386 3226 1 615 830 176 7 26 chr15 4015443 4015595 -99479379 - B1_Mur3 SINE Alu 0 149 1 2 615 708 239 65 74 chr15 4015617 4015834 -99479140 - B3 SINE B2 0 216 2 2 615 2139 99 105 3 chr15 4016105 4016448 -99478526 + Lx LINE L1 6273 6650 -4 2 615 3669 127 22 15 chr15 4016647 4017240 -99477734 - Lx2 LINE L1 -38 6959 6363 2 615 923 236 5 19 chr15 4017651 4017863 -99477111 - B3 SINE B2 -5 211 3 2 615 658 188 28 21 chr15 4018297 4018438 -99476536 + B1F SINE Alu 2 143 -6 2 615 26 0 0 0 chr15 4019037 4019063 -99475911 + AT_rich Low_complexity Low_complexity 1 26 0 2 615 232 290 14 0 chr15 4019855 4019924 -99475050 + MER58C DNA MER1_type 33 102 -113 2 615 3410 46 53 0 chr15 4020394 4020811 -99474163 - L1Md_T LINE L1 0 6582 6144 2 615 21 0 0 0 chr15 4021259 4021280 -99473694 + AT_rich Low_complexity Low_complexity 1 21 0 2 615 255 152 0 0 chr15 4021345 4021391 -99473583 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 615 1103 284 29 37 chr15 4021443 4021531 -99473443 + Lx9 LINE L1 6451 6534 -1110 3 615 2442 161 5 19 chr15 4021531 4021944 -99473030 + MTB_Mm LTR MaLR 1 407 0 3 615 1103 284 29 37 chr15 4021944 4022232 -99472742 + Lx9 LINE L1 6535 6824 -820 3 615 2316 110 7 88 chr15 4022350 4022768 -99472206 - Lx3B LINE L1 -5 6968 6585 3 615 799 231 43 0 chr15 4022776 4022962 -99472012 - B3 SINE B2 0 216 23 3 615 1229 290 53 62 chr15 4022993 4023555 -99471419 - Lx8 LINE L1 -10 7463 6907 3 615 2986 85 5 0 chr15 4023598 4023996 -99470978 - MTB LTR MaLR 0 400 1 3 615 1743 265 25 28 chr15 4024023 4024493 -99470481 - Lx8 LINE L1 -708 6765 6297 3 615 237 33 0 0 chr15 4025287 4025317 -99469657 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 615 625 286 141 0 chr15 4025438 4025679 -99469295 + L1MCa LINE L1 83 357 -6151 3 615 1748 146 32 78 chr15 4025925 4026296 -99468678 - ORR1B1 LTR MaLR 0 394 41 3 615 1235 164 0 0 chr15 4026308 4026521 -99468453 + MTC LTR MaLR 1 213 -208 4 615 1638 271 83 21 chr15 4027376 4027944 -99467030 - Lx8 LINE L1 -435 7038 6436 4 615 23 0 0 0 chr15 4028998 4029021 -99465953 + GC_rich Low_complexity Low_complexity 1 23 0 4 615 330 67 0 0 chr15 4030442 4030487 -99464487 + (TTA)n Simple_repeat Simple_repeat 1 45 0 4 615 281 336 19 0 chr15 4030605 4030709 -99464265 - B1F1 SINE Alu -38 111 6 4 615 22 0 0 0 chr15 4031902 4031924 -99463050 + AT_rich Low_complexity Low_complexity 1 22 0 4 615 2087 100 10 0 chr15 4032225 4032535 -99462439 - ORR1A2 LTR MaLR 0 327 15 4 615 306 231 51 8 chr15 4033560 4033678 -99461296 + (CACTC)n Simple_repeat Simple_repeat 2 124 0 4 615 198 0 0 0 chr15 4034175 4034197 -99460777 + (CTTG)n Simple_repeat Simple_repeat 2 23 0 4 615 186 289 103 26 chr15 4034325 4034403 -99460571 - L3 LINE CR1 -908 3581 3498 4 615 297 0 0 0 chr15 4034430 4034463 -99460511 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 615 243 259 18 9 chr15 4034573 4034645 -99460329 + CT-rich Low_complexity Low_complexity 1 72 0 5 615 704 232 0 0 chr15 4034649 4034787 -99460187 - B1_Mur1 SINE Alu -7 142 5 5 615 480 221 209 29 chr15 4034823 4034995 -99459979 - B3 SINE B2 -10 206 4 5 615 236 290 79 10 chr15 4035033 4035134 -99459840 + RLTR25A LTR ERVK 1 108 -920 5 615 275 296 41 76 chr15 4036024 4036196 -99458778 + RLTR25A LTR ERVK 938 1103 0 5 615 207 0 0 0 chr15 4036865 4036888 -99458086 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 615 2256 41 253 3 chr15 4037178 4037498 -99457476 - MTB LTR MaLR 0 400 1 5 615 230 180 80 0 chr15 4038254 4038304 -99456670 + L1MA5 LINE L1 6195 6248 -52 5 615 799 267 102 19 chr15 4038785 4039041 -99455933 + B4A SINE B4 1 277 -15 5 615 320 289 0 32 chr15 4039127 4039220 -99455754 + GA-rich Low_complexity Low_complexity 3 92 0 5 615 714 264 47 50 chr15 4040074 4040413 -99454561 - RLTR15 LTR ERVK -21 338 1 6 615 24 0 0 0 chr15 4042683 4042707 -99452267 + AT_rich Low_complexity Low_complexity 1 24 0 6 615 220 308 26 0 chr15 4044768 4044846 -99450128 + (CATA)n Simple_repeat Simple_repeat 1 80 0 6 615 292 306 73 9 chr15 4045045 4045154 -99449820 - RMER30 DNA MER1_type -3 199 84 6 615 1166 212 132 36 chr15 4045205 4045452 -99449522 - Lx7 LINE L1 0 7696 7416 6 615 198 0 0 0 chr15 4045452 4045474 -99449500 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 615 450 0 0 0 chr15 4045474 4045523 -99449451 + (GA)n Simple_repeat Simple_repeat 2 51 0 6 615 1166 212 132 36 chr15 4045523 4045720 -99449254 - Lx7 LINE L1 -281 7415 7209 6 615 697 150 88 22 chr15 4045723 4045859 -99449115 + B1_Mur4 SINE Alu 5 149 -1 6 615 258 211 0 26 chr15 4045969 4046047 -99448927 - Lx7 LINE L1 -60 7636 7561 6 615 1102 76 14 0 chr15 4046048 4046193 -99448781 + B1_Mus1 SINE Alu 2 148 0 6 615 735 116 0 0 chr15 4046193 4046305 -99448669 + (GAAA)n Simple_repeat Simple_repeat 1 112 0 7 615 183 42 0 0 chr15 4046339 4046363 -99448611 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 615 452 276 32 76 chr15 4048290 4048447 -99446527 + MER20 DNA MER1_type 14 163 -56 7 615 212 189 38 0 chr15 4049161 4049214 -99445760 - MIRb SINE MIR -31 237 183 7 615 479 237 149 0 chr15 4049771 4049885 -99445089 - B1F1 SINE Alu -17 132 2 7 615 282 285 123 96 chr15 4050167 4050191 -99444783 - L1MA9 LINE L1 -5 6307 6288 7 615 2217 151 114 0 chr15 4050191 4050569 -99444405 - MTC LTR MaLR 0 421 1 7 615 282 285 123 96 chr15 4050569 4050804 -99444170 - L1MA9 LINE L1 -25 6287 6041 7 615 226 294 119 0 chr15 4050854 4050963 -99444011 + MER97c DNA MER1_type? 58 179 -911 7 615 22 0 0 0 chr15 4051602 4051624 -99443350 + AT_rich Low_complexity Low_complexity 1 22 0 7 615 423 306 56 0 chr15 4052016 4052124 -99442850 - PB1D7 SINE Alu -5 115 2 7 615 231 36 0 0 chr15 4052657 4052685 -99442289 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 615 965 202 10 10 chr15 4052972 4053167 -99441807 + B3A SINE B2 3 197 -1 8 615 1028 23 90 0 chr15 4053551 4053684 -99441290 - L1Md_A LINE L1 -1 6581 6437 8 615 583 306 31 18 chr15 4055026 4055249 -99439725 - B4A SINE B4 -65 227 2 8 615 225 231 15 30 chr15 4055466 4055533 -99439441 + CT-rich Low_complexity Low_complexity 3 68 0 8 615 361 235 78 0 chr15 4056187 4056289 -99438685 - HAL1-2a_MD LINE L1 -569 2455 2346 8 615 998 193 24 24 chr15 4056486 4056693 -99438281 - B3 SINE B2 -7 209 3 8 615 24 0 0 0 chr15 4057303 4057327 -99437647 + AT_rich Low_complexity Low_complexity 1 24 0 8 615 409 113 16 0 chr15 4057344 4057406 -99437568 - B2_Mm2 SINE B2 -132 63 1 8 615 2144 46 50 3 chr15 4058463 4058745 -99436229 - ORR1A1 LTR MaLR -51 295 1 8 615 5652 60 42 1 chr15 4058745 4059528 -99435446 - ORR1A1-int LTR MaLR -79 1713 932 8 615 959 40 168 0 chr15 4059536 4059661 -99435313 - B1_Mm SINE Alu -1 146 1 9 615 21 0 0 0 chr15 4059801 4059822 -99435152 + AT_rich Low_complexity Low_complexity 1 21 0 9 615 1078 177 152 64 chr15 4059826 4060122 -99434852 - Lx5 LINE L1 -69 6981 6660 9 615 197 341 89 22 chr15 4060308 4060398 -99434576 + L2c LINE L2 3267 3362 -25 9 615 23 0 0 0 chr15 4060448 4060471 -99434503 + AT_rich Low_complexity Low_complexity 1 23 0 9 615 353 267 34 204 chr15 4060626 4060890 -99434084 - L1MD3 LINE L1 -209 7786 7568 9 615 287 257 152 86 chr15 4060860 4061175 -99433799 + L1MA6 LINE L1 5941 6276 -24 9 615 446 287 41 20 chr15 4061183 4061329 -99433645 - B1F1 SINE Alu 0 149 1 9 615 279 316 12 12 chr15 4061762 4061842 -99433132 + MER21B LTR ERV1 253 332 -531 9 615 638 316 71 47 chr15 4061873 4062212 -99432762 + MER21B LTR ERV1 385 731 -132 9 615 499 254 113 101 chr15 4062214 4062535 -99432439 - L1MD3 LINE L1 -805 6980 6655 9 615 445 203 8 16 chr15 4062853 4062947 -99432027 + GA-rich Low_complexity Low_complexity 2 94 0 9 615 1397 0 23 0 chr15 4062947 4063120 -99431854 + (GAA)n Simple_repeat Simple_repeat 3 179 0 1 615 445 203 8 16 chr15 4063120 4063150 -99431824 + polypurine Low_complexity Low_complexity 95 124 0 1 76 1322 23 11 11 chr15 4063152 4063328 -99431646 + (GAA)n Simple_repeat Simple_repeat 3 178 0 1 616 2061 121 43 0 chr15 4063699 4064045 -99430929 - L1_Mm LINE L1 -1212 4671 4311 1 616 18143 64 4 3 chr15 4064559 4067638 -99427336 - L1Md_F2 LINE L1 0 6582 3501 1 616 8513 106 7 6 chr15 4067636 4068207 -99426767 + L1_Mus2 LINE L1 4668 5234 -649 1 616 477 0 0 0 chr15 4068207 4068260 -99426714 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 616 8513 83 4 15 chr15 4068260 4069598 -99425376 + L1_Mus2 LINE L1 5235 6566 0 1 616 1301 38 0 0 chr15 4069607 4069766 -99425208 + B2_Mm1t SINE B2 2 160 -33 1 616 414 0 0 0 chr15 4069766 4069812 -99425162 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 1 616 2755 68 3 11 chr15 4072245 4072603 -99422371 - L1Md_F2 LINE L1 -2 6580 6226 1 616 321 89 0 0 chr15 4073078 4073123 -99421851 + (A)n Simple_repeat Simple_repeat 1 45 0 1 616 1374 50 5 96 chr15 4073744 4073942 -99421032 - L1_Mus2 LINE L1 0 6566 6387 1 616 317 372 27 27 chr15 4075000 4075149 -99419825 - MLT1J2 LTR MaLR -238 210 62 1 616 383 0 0 21 chr15 4075709 4075757 -99419217 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 616 824 144 0 121 chr15 4076477 4076624 -99418350 - Lx LINE L1 -3 6651 6528 1 616 2939 98 84 33 chr15 4076624 4077076 -99417898 - IAPLTR2_Mm LTR ERVK 0 475 1 1 616 824 144 0 121 chr15 4077076 4077126 -99417848 - Lx LINE L1 -127 6527 6478 1 616 1725 107 0 0 chr15 4077129 4077362 -99417612 + Lx LINE L1 6217 6449 -205 1 616 459 52 0 0 chr15 4077835 4077893 -99417081 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 616 584 270 107 13 chr15 4079644 4079794 -99415180 - RSINE1 SINE B4 0 165 2 1 616 180 0 0 0 chr15 4079881 4079901 -99415073 + (T)n Simple_repeat Simple_repeat 1 20 0 1 616 1128 90 7 0 chr15 4079901 4080045 -99414929 - B1_Mm SINE Alu 0 147 3 1 616 247 104 0 40 chr15 4080745 4080795 -99414179 + (TCTCCC)n Simple_repeat Simple_repeat 5 52 0 1 616 474 211 169 0 chr15 4081079 4081193 -99413781 - B1F SINE Alu -20 129 8 1 616 435 83 0 0 chr15 4081669 4081729 -99413245 + (TCCC)n Simple_repeat Simple_repeat 4 63 0 1 616 265 317 32 48 chr15 4082830 4082956 -99412018 + L2a LINE L2 2989 3112 -314 1 616 199 345 0 0 chr15 4083237 4083295 -99411679 - MIRc SINE MIR -105 163 106 1 616 5452 48 0 3 chr15 4083536 4084168 -99410806 - L1Md_F2 LINE L1 -2 6580 5951 1 616 220 321 0 54 chr15 4084807 4084863 -99410111 + ID4_ SINE ID 5 57 -26 1 616 2426 178 114 6 chr15 4085393 4085868 -99409106 - RLTR11A LTR ERVK -2 526 1 1 616 347 123 321 0 chr15 4085907 4085988 -99408986 - MYSERV16_I-int LTR ERVK -28 2298 2192 1 616 536 59 0 0 chr15 4085990 4086058 -99408916 + RMER17A LTR ERVK 1 68 -683 1 616 276 53 0 0 chr15 4086058 4086096 -99408878 - RMER17A LTR ERVK -713 38 1 1 616 3196 208 138 15 chr15 4086096 4086943 -99408031 - MYSERV-int LTR ERVK -119 6431 5481 1 616 1341 20 0 0 chr15 4088086 4088233 -99406741 + B1_Mus2 SINE Alu 1 147 0 1 616 3632 182 78 25 chr15 4088563 4089385 -99405589 - Lx3C LINE L1 -33 6943 6079 1 616 234 0 0 0 chr15 4089681 4089707 -99405267 + (CGAGG)n Simple_repeat Simple_repeat 2 27 0 1 616 3447 62 2 5 chr15 4090062 4090470 -99404504 + MTB_Mm LTR MaLR 1 407 0 1 616 233 217 0 0 chr15 4091258 4091304 -99403670 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 1 616 2921 54 0 19 chr15 4093162 4093523 -99401451 - L1_Mus1 LINE L1 0 6567 6214 1 616 2718 50 0 0 chr15 4093523 4093845 -99401129 + L1_Mus1 LINE L1 5890 6211 -356 1 616 1873 137 70 3 chr15 4094070 4094370 -99400604 - Lx LINE L1 -4 6650 6331 1 616 1325 57 0 0 chr15 4094378 4094537 -99400437 + L1_Mus1 LINE L1 6250 6408 -159 1 616 663 129 105 0 chr15 4094537 4094661 -99400313 - Lx2 LINE L1 -329 6668 6532 1 616 229 246 0 0 chr15 4095353 4095410 -99399564 + (CCCTG)n Simple_repeat Simple_repeat 1 57 0 1 616 261 0 0 0 chr15 4098656 4098685 -99396289 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 616 225 217 0 0 chr15 4098960 4099006 -99395968 - L1MA6 LINE L1 -33 6258 6213 1 616 1002 303 64 81 chr15 4099141 4099905 -99395069 - L1MA6 LINE L1 -257 6043 5293 1 616 907 120 44 15 chr15 4099908 4100043 -99394931 - B1_Mur3 SINE Alu -9 140 2 1 616 288 233 22 131 chr15 4100048 4100307 -99394667 - L1MA6 LINE L1 -972 5328 5096 1 616 477 90 0 0 chr15 4100320 4100387 -99394587 + (TCCC)n Simple_repeat Simple_repeat 4 70 0 1 616 304 284 48 134 chr15 4100389 4100410 -99394564 - B4A SINE B4 -47 245 173 1 616 861 159 0 21 chr15 4100410 4100551 -99394423 - B1_Mus1 SINE Alu -5 143 6 1 616 304 284 48 134 chr15 4100551 4100576 -99394398 - B4A SINE B4 -47 172 75 1 616 1303 264 20 127 chr15 4100576 4101154 -99393820 - L1MA6 LINE L1 -1053 5090 4586 1 616 628 226 116 44 chr15 4101154 4101335 -99393639 + B3 SINE B2 5 198 -18 1 616 1303 264 20 127 chr15 4101335 4101447 -99393527 - L1MA6 LINE L1 -1558 4585 4474 1 616 568 319 14 9 chr15 4101459 4101671 -99393303 - L1M3 LINE L1 -406 5765 5553 1 616 378 245 106 8 chr15 4101698 4101883 -99393091 - L1M3 LINE L1 -741 5430 5225 1 616 3602 197 117 30 chr15 4102240 4103370 -99391604 - Lx5 LINE L1 -61 7412 6054 1 616 22 56 0 0 chr15 4103614 4103650 -99391324 + AT_rich Low_complexity Low_complexity 1 36 0 1 616 697 214 38 0 chr15 4105493 4105624 -99389350 - B1_Mur3 SINE Alu -12 137 2 1 616 271 60 40 0 chr15 4105832 4105882 -99389092 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 1 616 36424 69 1 15 chr15 4105882 4111949 -99383025 - L1Md_F2 LINE L1 -100 6482 511 1 616 420 20 0 0 chr15 4112048 4112097 -99382877 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 616 414 0 0 0 chr15 4113617 4113663 -99381311 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 616 241 296 111 10 chr15 4113873 4113972 -99381002 - MIRc SINE MIR -17 251 143 1 616 207 0 0 0 chr15 4114131 4114154 -99380820 + (A)n Simple_repeat Simple_repeat 1 23 0 1 616 3699 62 22 6 chr15 4114640 4115128 -99379846 + LTRIS2 LTR ERV1 69 564 0 1 616 318 314 153 67 chr15 4116034 4116184 -99378790 + RSINE1 SINE B4 3 165 0 1 616 186 103 0 0 chr15 4116184 4116213 -99378761 + (CCA)n Simple_repeat Simple_repeat 1 29 0 1 616 897 160 164 5 chr15 4116267 4116462 -99378512 - URR1A DNA MER1_type 0 226 1 1 616 282 333 115 93 chr15 4116469 4116536 -99378438 + RSINE1 SINE B4 24 102 -63 1 616 2530 172 72 136 chr15 4116536 4117189 -99377785 + RMER19C LTR ERVK 1 611 0 1 616 282 333 115 93 chr15 4117189 4117260 -99377714 + RSINE1 SINE B4 103 165 0 1 616 733 129 35 12 chr15 4117296 4117469 -99377505 + CT-rich Low_complexity Low_complexity 1 177 0 1 616 341 275 33 8 chr15 4117516 4117661 -99377313 + Lx9 LINE L1 6899 7178 -466 1 616 1413 221 124 15 chr15 4117806 4118252 -99376722 + RMER15 LTR ERVL 22 575 0 1 616 574 301 65 9 chr15 4118252 4118483 -99376491 + Lx9 LINE L1 7198 7441 -203 1 616 536 0 16 0 chr15 4118506 4118570 -99376404 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 616 207 0 0 0 chr15 4119143 4119166 -99375808 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 616 1315 317 44 19 chr15 4119218 4119810 -99375164 - Lx8 LINE L1 -90 7383 6777 1 616 247 333 27 0 chr15 4120106 4120217 -99374757 + CT-rich Low_complexity Low_complexity 3 116 0 1 616 632 280 66 39 chr15 4120242 4120364 -99374610 - LTR41 LTR ERVL -3 755 644 1 616 1093 90 0 7 chr15 4120364 4120510 -99374464 - B1_Mm SINE Alu -1 146 2 1 616 632 336 105 98 chr15 4120510 4121142 -99373832 - LTR41 LTR ERVL -125 643 3 1 616 25 31 0 0 chr15 4122238 4122270 -99372704 + AT_rich Low_complexity Low_complexity 1 32 0 1 616 446 299 106 81 chr15 4122567 4123171 -99371803 + L1MD2 LINE L1 5486 6104 -255 1 616 207 0 0 0 chr15 4123197 4123220 -99371754 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 616 387 0 0 0 chr15 4123220 4123262 -99371712 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 616 230 333 26 0 chr15 4123559 4123637 -99371337 - ID4_ SINE ID -1 82 3 1 616 182 86 86 0 chr15 4123690 4123725 -99371249 + T-rich Low_complexity Low_complexity 2 39 0 1 616 255 61 0 0 chr15 4124002 4124035 -99370939 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 616 1123 45 0 0 chr15 4124915 4125049 -99369925 + B1_Mus2 SINE Alu 2 135 -12 1 616 302 0 0 26 chr15 4125051 4125090 -99369884 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 1 616 216 0 0 0 chr15 4125090 4125114 -99369860 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 616 960 311 90 47 chr15 4125290 4126170 -99368804 + L1MCa LINE L1 468 1385 -5123 1 616 225 291 0 0 chr15 4126188 4126274 -99368700 + GA-rich Low_complexity Low_complexity 3 88 0 1 616 1256 199 171 95 chr15 4126417 4127085 -99367889 - RMER6C LTR ERVK 0 720 5 1 616 257 284 57 86 chr15 4127226 4127345 -99367629 + B1F2 SINE Alu 9 147 -2 1 616 302 196 11 0 chr15 4127447 4127539 -99367435 + CT-rich Low_complexity Low_complexity 2 94 0 1 616 31 26 0 0 chr15 4127586 4127624 -99367350 + AT_rich Low_complexity Low_complexity 1 38 0 1 616 180 163 0 0 chr15 4127650 4127693 -99367281 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 616 611 215 115 12 chr15 4127697 4127862 -99367112 - B3A SINE B2 -16 182 1 1 616 1307 72 0 6 chr15 4128175 4128356 -99366618 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 616 809 127 8 0 chr15 4128356 4128490 -99366484 + (TC)n Simple_repeat Simple_repeat 2 136 0 1 616 1027 192 108 0 chr15 4128958 4129161 -99365813 + URR1A DNA MER1_type 1 225 -1 1 616 948 248 9 14 chr15 4130047 4130264 -99364710 - B3 SINE B2 0 216 1 1 616 278 143 0 51 chr15 4130300 4130359 -99364615 - L1MC2 LINE L1 -259 6085 6030 1 616 180 0 0 0 chr15 4130374 4130394 -99364580 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 616 304 375 105 29 chr15 4130460 4130699 -99364275 - MIRb SINE MIR -4 264 8 1 616 327 49 0 0 chr15 4130890 4130931 -99364043 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 1 616 306 274 93 44 chr15 4130986 4131211 -99363763 - Lx9 LINE L1 -8 7636 7401 1 616 917 215 56 0 chr15 4131372 4131567 -99363407 - RMER6D LTR ERVK 0 720 515 1 616 1092 280 75 10 chr15 4131973 4132280 -99362694 + MTE2a LTR MaLR 51 377 -2 2 616 195 129 0 0 chr15 4132869 4132900 -99362074 + (TTCC)n Simple_repeat Simple_repeat 1 31 0 2 616 515 238 0 29 chr15 4132967 4133071 -99361903 - PB1D10 SINE Alu -7 110 10 2 616 254 311 0 16 chr15 4133020 4133082 -99361892 - B4A SINE B4 -147 145 85 2 616 594 63 0 0 chr15 4133548 4133627 -99361347 + (TA)n Simple_repeat Simple_repeat 2 80 0 2 616 882 301 105 23 chr15 4133713 4134362 -99360612 - Lx9 LINE L1 -37 7607 6906 2 616 317 210 32 0 chr15 4134450 4134512 -99360462 + ID4 SINE ID 6 69 -14 2 616 25 0 0 0 chr15 4134676 4134701 -99360273 + AT_rich Low_complexity Low_complexity 1 25 0 2 616 1362 249 51 31 chr15 4135005 4135358 -99359616 - MTE2a LTR MaLR -2 377 18 2 616 540 311 68 48 chr15 4135572 4135909 -99359065 + Lx8 LINE L1 7124 7467 -6 2 616 23 78 0 0 chr15 4136583 4136634 -99358340 + AT_rich Low_complexity Low_complexity 1 51 0 2 616 393 330 110 25 chr15 4136686 4136931 -99358043 - Zaphod DNA Tip100 -3441 590 325 2 616 219 114 0 0 chr15 4136932 4136967 -99358007 + (TTCC)n Simple_repeat Simple_repeat 1 35 0 2 616 207 0 0 0 chr15 4137834 4137857 -99357117 + (T)n Simple_repeat Simple_repeat 1 23 0 2 616 405 0 0 0 chr15 4138509 4138554 -99356420 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 616 1583 176 53 34 chr15 4138843 4139201 -99355773 - Lx5 LINE L1 0 7050 6686 2 616 2650 233 60 9 chr15 4140494 4141175 -99353799 - Lx5 LINE L1 -46 7414 6315 2 616 12874 151 69 22 chr15 4141171 4141411 -99353563 - L1_Mur3 LINE L1 -1768 4109 3860 2 616 212 0 36 0 chr15 4141411 4141439 -99353535 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2 616 12874 151 69 22 chr15 4141439 4142369 -99352605 - L1_Mur3 LINE L1 -2018 3859 2873 2 616 1290 49 0 0 chr15 4142369 4142531 -99352443 + (TC)n Simple_repeat Simple_repeat 1 162 0 2 616 12874 151 69 22 chr15 4142531 4143233 -99351741 - L1_Mur3 LINE L1 -3005 2872 2143 2 616 210 37 0 0 chr15 4143233 4143260 -99351714 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 616 12874 177 54 16 chr15 4143260 4144439 -99350535 - L1_Mur3 LINE L1 -3735 2142 922 2 616 513 299 32 36 chr15 4146306 4146525 -99348449 + MER20 DNA MER1_type 2 219 0 2 616 297 0 0 0 chr15 4147424 4147457 -99347517 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 616 247 321 35 63 chr15 4148405 4148727 -99346247 + L2a LINE L2 3099 3392 -34 2 616 474 301 30 0 chr15 4149106 4149239 -99345735 - MER21B LTR ERV1 -515 348 212 2 616 227 330 63 45 chr15 4149623 4149734 -99345240 - PB1D10 SINE Alu -1 116 4 2 616 1077 318 89 14 chr15 4150027 4150454 -99344520 + MER21B LTR ERV1 382 840 -23 2 616 2197 278 65 68 chr15 4150580 4151070 -99343904 + Lx9 LINE L1 6481 6989 -655 2 616 783 83 0 0 chr15 4151070 4151178 -99343796 + (TTCC)n Simple_repeat Simple_repeat 1 108 0 2 616 2197 278 65 68 chr15 4151178 4151277 -99343697 + Lx9 LINE L1 6990 7063 -581 2 616 348 33 83 0 chr15 4151277 4151337 -99343637 + (TCTA)n Simple_repeat Simple_repeat 3 67 0 2 616 2197 278 65 68 chr15 4151337 4151684 -99343290 + Lx9 LINE L1 7064 7415 -229 2 616 387 0 0 0 chr15 4151831 4151874 -99343100 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 2 616 292 214 58 18 chr15 4151903 4152074 -99342900 + (TA)n Simple_repeat Simple_repeat 2 179 0 2 616 396 0 0 0 chr15 4152086 4152130 -99342844 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 616 272 304 55 39 chr15 4152302 4152447 -99342527 + B4 SINE B4 3 143 -149 2 616 402 21 0 0 chr15 4152640 4152687 -99342287 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 616 378 0 0 0 chr15 4152687 4152728 -99342246 + (GA)n Simple_repeat Simple_repeat 2 43 0 2 616 2180 177 61 45 chr15 4153248 4153739 -99341235 + RLTR28 LTR ERVL 1 499 -25 2 616 1476 193 64 25 chr15 4153880 4154283 -99340691 - RLTR1 LTR ERV1 0 624 135 2 616 301 294 15 80 chr15 4154316 4154453 -99340521 + MLT1A LTR MaLR 237 364 -10 2 616 2022 125 23 82 chr15 4154575 4154678 -99340296 - RLTR9A LTR ERVK 0 368 293 2 616 207 0 0 0 chr15 4154678 4154701 -99340273 + (CAG)n Simple_repeat Simple_repeat 1 23 0 2 616 2022 125 23 82 chr15 4154701 4154988 -99339986 - RLTR9A LTR ERVK -76 292 1 2 616 949 305 34 59 chr15 4155550 4155937 -99339037 + MTE2b LTR MaLR 3 379 0 2 616 506 16 16 0 chr15 4155963 4156026 -99338948 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 2 616 22 35 0 0 chr15 4156400 4156429 -99338545 + AT_rich Low_complexity Low_complexity 1 29 0 2 616 21 36 0 0 chr15 4157544 4157572 -99337402 + AT_rich Low_complexity Low_complexity 1 28 0 2 616 269 119 0 33 chr15 4157755 4157816 -99337158 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 2 616 248 315 79 82 chr15 4158231 4158476 -99336498 + Tigger15a DNA TcMar 370 608 -107 2 616 351 0 0 0 chr15 4158476 4158515 -99336459 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 616 248 315 79 82 chr15 4158515 4158549 -99336425 + Tigger15a DNA TcMar 609 647 -68 2 616 220 65 0 61 chr15 4159063 4159112 -99335862 + (TTTTTG)n Simple_repeat Simple_repeat 6 51 0 2 616 390 91 0 0 chr15 4159149 4159204 -99335770 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 2 616 1324 198 142 89 chr15 4160011 4160288 -99334686 + MTD LTR MaLR 1 292 -127 2 616 1113 75 7 0 chr15 4160288 4160434 -99334540 - B1_Mus1 SINE Alu 0 148 2 2 616 1324 198 142 89 chr15 4160434 4160549 -99334425 + MTD LTR MaLR 293 414 -5 2 616 300 147 40 0 chr15 4160670 4160745 -99334229 + CT-rich Low_complexity Low_complexity 2 79 0 2 616 366 23 0 0 chr15 4160748 4160791 -99334183 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 616 378 91 0 0 chr15 4161113 4161168 -99333806 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 616 414 297 133 0 chr15 4161174 4161302 -99333672 - RSINE1 SINE B4 -18 147 3 2 616 859 201 197 68 chr15 4163468 4163793 -99331181 + RLTR9A LTR ERVK 2 368 0 2 616 313 309 107 0 chr15 4163990 4164074 -99330900 - ID_B1 SINE B4 -41 183 91 2 616 1028 103 0 6 chr15 4164243 4164400 -99330574 + (GAA)n Simple_repeat Simple_repeat 2 157 0 2 616 21399 19 1 0 chr15 4164907 4168506 -99326468 - L1Md_A LINE L1 -2 6580 2979 2 616 280 277 0 0 chr15 4168912 4168967 -99326007 + polypyrimidine Low_complexity Low_complexity 30 84 0 2 616 1064 85 7 0 chr15 4168967 4169120 -99325854 + (TTCC)n Simple_repeat Simple_repeat 4 157 0 2 616 280 277 0 0 chr15 4169120 4169147 -99325827 + polypyrimidine Low_complexity Low_complexity 3 29 0 2 616 210 191 0 0 chr15 4170063 4170105 -99324869 + (TTA)n Simple_repeat Simple_repeat 1 42 0 2 616 264 122 0 0 chr15 4170267 4170308 -99324666 + (GGA)n Simple_repeat Simple_repeat 3 43 0 2 616 23 0 0 0 chr15 4170470 4170493 -99324481 + AT_rich Low_complexity Low_complexity 1 23 0 2 616 291 114 0 0 chr15 4170524 4170568 -99324406 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 616 180 0 0 0 chr15 4170569 4170589 -99324385 + (GA)n Simple_repeat Simple_repeat 1 20 0 2 616 766 258 29 15 chr15 4171578 4171783 -99323191 + B3 SINE B2 1 208 -8 2 616 21 0 0 0 chr15 4171785 4171806 -99323168 + AT_rich Low_complexity Low_complexity 1 21 0 2 616 521 314 7 0 chr15 4171817 4171954 -99323020 + B1_Mur1 SINE Alu 6 143 -6 2 616 196 250 171 0 chr15 4172742 4172818 -99322156 - L2c LINE L2 -3 3384 3296 2 616 588 53 0 0 chr15 4172923 4172999 -99321975 + (TG)n Simple_repeat Simple_repeat 2 77 0 2 616 383 280 62 92 chr15 4173113 4173353 -99321621 - RMER4B LTR ERVK -319 266 34 2 616 293 338 72 31 chr15 4173485 4173708 -99321266 + HERV16-int LTR ERVL 213 444 -4552 2 616 1004 83 13 46 chr15 4173768 4173920 -99321054 + B1_Mus1 SINE Alu 2 148 0 2 616 436 68 0 27 chr15 4173920 4173995 -99320979 + (CAAAA)n Simple_repeat Simple_repeat 1 73 0 2 616 307 369 46 9 chr15 4174407 4174626 -99320348 + HERV16-int LTR ERVL 957 1183 -3813 2 616 388 293 141 30 chr15 4174631 4174859 -99320115 + MLT2D LTR ERVL 48 309 -88 2 616 450 125 0 0 chr15 4174876 4174956 -99320018 + (TC)n Simple_repeat Simple_repeat 1 80 0 2 616 3558 54 0 0 chr15 4175575 4176022 -99318952 - L1_Mm LINE L1 -1025 4858 4412 2 616 4505 63 10 2 chr15 4176022 4176608 -99318366 + L1Md_F2 LINE L1 5989 6579 -3 2 616 22 35 0 0 chr15 4176613 4176642 -99318332 + AT_rich Low_complexity Low_complexity 1 29 0 2 616 452 313 122 65 chr15 4177685 4178071 -99316903 - MLT1C LTR MaLR -6 461 54 2 616 35 63 0 0 chr15 4179186 4179249 -99315725 + AT_rich Low_complexity Low_complexity 1 63 0 2 616 666 351 96 21 chr15 4179623 4179955 -99315019 - MLT1A0 LTR MaLR 0 365 9 2 616 1796 219 29 31 chr15 4181312 4181731 -99313243 - MTD LTR MaLR 0 419 2 2 616 195 69 0 0 chr15 4181948 4181977 -99312997 + (A)n Simple_repeat Simple_repeat 1 29 0 2 616 1240 145 14 27 chr15 4182667 4182887 -99312087 - URR1A DNA MER1_type 0 226 10 2 616 274 265 81 57 chr15 4183104 4183228 -99311746 + MIRb SINE MIR 44 170 -98 2 616 23 33 0 0 chr15 4183531 4183561 -99311413 + AT_rich Low_complexity Low_complexity 1 30 0 2 616 1344 274 51 71 chr15 4183589 4183718 -99311256 + RMER5 LTR ERV1 1 128 -406 2 616 772 245 94 0 chr15 4183718 4183910 -99311064 - B3 SINE B2 -6 210 1 2 616 1344 274 51 71 chr15 4183910 4184314 -99310660 + RMER5 LTR ERV1 129 523 -11 2 616 250 337 9 37 chr15 4184716 4184824 -99310150 - MLT1A0 LTR MaLR -258 107 3 2 616 387 0 0 0 chr15 4185197 4185240 -99309734 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 616 1572 199 89 3 chr15 4185473 4185800 -99309174 + RMER5 LTR ERV1 2 356 -178 2 616 326 216 95 0 chr15 4185800 4185874 -99309100 - Lx7 LINE L1 -299 5581 5501 2 616 6721 229 78 81 chr15 4185858 4187347 -99307627 + Lx7 LINE L1 5554 7118 -578 2 616 246 300 0 91 chr15 4187347 4187457 -99307517 + Tigger10 DNA Tigger 368 467 -1376 2 616 6721 229 78 81 chr15 4187457 4188005 -99306969 + Lx7 LINE L1 7119 7696 0 2 616 270 0 0 0 chr15 4188009 4188039 -99306935 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 2 616 954 159 65 0 chr15 4188050 4188220 -99306754 + RMER5 LTR ERV1 354 534 0 2 616 299 339 26 57 chr15 4188319 4188467 -99306507 - MIR SINE MIR -116 152 3 2 616 298 278 11 0 chr15 4189483 4189573 -99305401 + L3 LINE CR1 2109 2199 -2290 2 616 247 301 12 12 chr15 4190432 4190516 -99304458 - Lx8 LINE L1 -1202 6271 6188 2 616 360 287 42 56 chr15 4190949 4191093 -99303881 + MER106A DNA MER1_type 43 184 -52 3 616 357 312 112 25 chr15 4191608 4191805 -99303169 + LTR50 LTR ERVL 3 216 -579 3 616 675 360 41 34 chr15 4192372 4192760 -99302214 + MLT1C LTR MaLR 77 467 0 3 616 190 0 67 0 chr15 4193635 4193665 -99301309 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 3 616 21 0 0 0 chr15 4193689 4193710 -99301264 + AT_rich Low_complexity Low_complexity 1 21 0 3 617 194 279 0 85 chr15 4194910 4194957 -99300017 + MIRb SINE MIR 34 76 -192 3 617 505 176 14 29 chr15 4195035 4195152 -99299822 + CT-rich Low_complexity Low_complexity 25 140 0 3 617 1094 122 0 6 chr15 4195152 4195333 -99299641 + (TCC)n Simple_repeat Simple_repeat 1 180 0 3 617 505 176 14 29 chr15 4195333 4195355 -99299619 + polypyrimidine Low_complexity Low_complexity 3 24 0 3 617 371 273 87 67 chr15 4196295 4196444 -99298530 + MTEa LTR MaLR 208 368 -11 3 617 3292 244 63 19 chr15 4196472 4197328 -99297646 - RCHARR1 DNA MER1_type -8 966 73 3 617 408 257 80 7 chr15 4197329 4197466 -99297508 + RCHARR1 DNA MER1_type 653 799 -175 3 617 324 0 0 0 chr15 4197608 4197644 -99297330 + (CATA)n Simple_repeat Simple_repeat 3 38 0 3 617 353 333 56 14 chr15 4197672 4197715 -99297259 - MLT2B1 LTR ERVL -153 367 324 3 617 189 0 0 0 chr15 4197715 4197736 -99297238 + (CTG)n Simple_repeat Simple_repeat 2 22 0 3 617 353 333 56 14 chr15 4197736 4197835 -99297139 - MLT2B1 LTR ERVL -197 323 220 3 617 703 308 99 28 chr15 4197857 4198233 -99296741 - MLT2B4 LTR ERVL -75 487 13 3 617 1226 261 89 28 chr15 4198246 4198830 -99296144 + Lx9 LINE L1 6813 7466 -178 3 617 741 23 0 0 chr15 4198834 4198921 -99296053 + (TA)n Simple_repeat Simple_repeat 2 88 0 3 617 378 271 40 43 chr15 4199310 4199539 -99295435 + RLTR10A LTR ERVK 140 411 0 3 617 446 340 37 12 chr15 4200333 4200494 -99294480 + MER63A DNA AcHobo 1 165 -45 3 617 396 0 0 0 chr15 4200609 4200653 -99294321 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 617 1109 93 6 6 chr15 4200665 4200828 -99294146 - B2_Mm2 SINE B2 -30 165 3 3 617 408 207 485 0 chr15 4200854 4200988 -99293986 - B3 SINE B2 -17 199 1 3 617 22 35 0 0 chr15 4201183 4201212 -99293762 + AT_rich Low_complexity Low_complexity 1 29 0 3 617 5263 91 22 4 chr15 4201283 4202260 -99292714 + L1VL4 LINE L1 200 1199 -2360 3 617 641 212 42 0 chr15 4202644 4202762 -99292212 - ETnERV2-int LTR ERVK -214 7192 7070 3 617 7646 207 8 117 chr15 4202762 4203345 -99291629 + L1_Mm LINE L1 1550 2047 -3833 3 617 2462 88 3 38 chr15 4203345 4203711 -99291263 + L1_Mus2 LINE L1 6214 6566 0 3 617 7766 161 8 96 chr15 4203711 4204298 -99290676 + L1_Mm LINE L1 2040 2635 -3245 3 617 422 179 0 54 chr15 4204298 4204410 -99290564 + L1Md_F2 LINE L1 6477 6582 0 3 617 9307 83 9 11 chr15 4204410 4205834 -99289140 + L1_Mm LINE L1 2632 3902 -12 3 617 246 62 0 0 chr15 4205834 4205866 -99289108 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 617 570 29 0 0 chr15 4207397 4207465 -99287509 + (TTTTG)n Simple_repeat Simple_repeat 2 69 0 3 617 980 116 0 45 chr15 4207465 4207611 -99287363 - B1_Mus1 SINE Alu -8 140 2 3 617 21 57 0 0 chr15 4208104 4208139 -99286835 + AT_rich Low_complexity Low_complexity 1 35 0 3 617 4400 118 28 9 chr15 4208139 4208824 -99286150 - Lx4A LINE L1 0 7058 6361 3 617 370 389 83 25 chr15 4208975 4209215 -99285759 - LTR88c LTR Genie? -591 271 18 3 617 485 16 16 0 chr15 4209228 4209290 -99285684 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 617 257 362 73 53 chr15 4209517 4209762 -99285212 + ORR1E LTR MaLR 102 351 -8 3 617 260 169 67 17 chr15 4211358 4211418 -99283556 - MLT1K LTR MaLR -7 588 526 3 617 381 211 8 15 chr15 4211793 4211923 -99283051 + (CA)n Simple_repeat Simple_repeat 1 129 0 3 617 21 0 0 0 chr15 4212033 4212054 -99282920 + AT_rich Low_complexity Low_complexity 1 21 0 3 617 288 352 142 11 chr15 4212873 4213160 -99281814 + L2a LINE L2 2803 3127 -299 3 617 3259 43 5 2 chr15 4213526 4213921 -99281053 - MTA_Mm LTR MaLR 0 396 1 3 617 192 77 0 0 chr15 4213997 4214023 -99280951 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 617 573 15 0 0 chr15 4214027 4214093 -99280881 + (TC)n Simple_repeat Simple_repeat 2 67 0 3 617 283 292 55 22 chr15 4214401 4214492 -99280482 - MER5B DNA MER1_type -83 95 2 3 617 392 285 24 119 chr15 4214872 4215120 -99279854 + MIRb SINE MIR 31 261 -1 3 617 388 187 18 0 chr15 4215237 4215331 -99279643 - MTEa LTR MaLR -281 98 1 3 617 513 163 0 0 chr15 4216513 4216605 -99278369 + (CA)n Simple_repeat Simple_repeat 1 92 0 3 617 554 319 0 50 chr15 4216682 4216880 -99278094 - RMER30 DNA MER1_type -4 198 11 3 617 3040 257 28 11 chr15 4216938 4217835 -99277139 - L1_Mur3 LINE L1 -816 5064 4153 3 617 1869 222 60 46 chr15 4217923 4218405 -99276569 - RLTR18 LTR ERVK 0 616 128 3 617 327 224 15 0 chr15 4218410 4218477 -99276497 + B1F SINE Alu 80 147 -2 3 617 502 290 172 20 chr15 4218508 4218757 -99276217 + B4A SINE B4 2 288 -4 3 617 252 0 0 0 chr15 4218835 4218863 -99276111 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 617 1856 135 55 10 chr15 4219572 4219879 -99275095 + ORR1A4 LTR MaLR 1 321 -8 3 617 248 363 0 62 chr15 4220588 4220732 -99274242 + L2c LINE L2 3253 3387 0 3 617 853 249 0 44 chr15 4221390 4221571 -99273403 - B3 SINE B2 -5 211 39 3 617 425 296 50 27 chr15 4222210 4222429 -99272545 + L1M3 LINE L1 4696 4919 -1221 3 617 303 247 108 21 chr15 4222451 4222691 -99272283 + L1M3 LINE L1 5107 5367 -779 3 617 1076 303 76 18 chr15 4222658 4223266 -99271708 + L1MB2 LINE L1 5335 5977 -194 3 617 790 128 72 0 chr15 4223293 4223418 -99271556 + B2_Mm2 SINE B2 1 134 -61 3 617 3280 193 40 67 chr15 4223470 4223852 -99271122 + Lx5 LINE L1 5419 5879 -1581 3 617 231 274 0 0 chr15 4223852 4223903 -99271071 - ORR1E LTR MaLR -245 114 64 3 617 3280 193 40 67 chr15 4223903 4224586 -99270388 + Lx5 LINE L1 5880 6706 -754 3 617 529 269 60 60 chr15 4224701 4224970 -99270004 + L1ME2 LINE L1 5697 5965 -199 3 617 8399 125 43 97 chr15 4225466 4225696 -99269278 - RLTR21 LTR ERVK -27 1545 1305 3 617 501 17 0 0 chr15 4225696 4225754 -99269220 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 617 8399 125 43 97 chr15 4225754 4227156 -99267818 - RLTR21 LTR ERVK -268 1304 2 3 617 210 350 0 36 chr15 4227161 4227244 -99267730 + MIR SINE MIR 35 114 -148 3 617 272 48 24 0 chr15 4227502 4227544 -99267430 + (CAA)n Simple_repeat Simple_repeat 3 45 0 3 617 14118 54 7 1 chr15 4227614 4230216 -99264758 - L1Md_F2 LINE L1 -2 6580 3970 3 617 38701 16 1 6 chr15 4230215 4236523 -99258451 - L1Md_A LINE L1 0 6582 308 3 617 19168 83 1 1 chr15 4236522 4240000 -99254974 - L1Md_F2 LINE L1 -1900 3983 503 3 617 464 0 0 18 chr15 4240775 4240832 -99254142 + (CAA)n Simple_repeat Simple_repeat 2 57 0 3 617 465 138 28 128 chr15 4240840 4240963 -99254011 - Lx7 LINE L1 -193 7503 7394 3 617 3093 73 10 0 chr15 4240963 4241359 -99253615 - MTB LTR MaLR 0 400 1 3 617 465 138 28 128 chr15 4241359 4241376 -99253598 - Lx7 LINE L1 -303 7393 7377 3 617 2370 196 35 106 chr15 4241422 4242080 -99252894 - RMER19C LTR ERVK 0 611 1 3 617 464 155 73 184 chr15 4242194 4242336 -99252638 + RMER17C LTR ERVK 46 184 -226 3 617 1216 70 6 6 chr15 4242336 4242509 -99252465 + (TCTCC)n Simple_repeat Simple_repeat 2 174 0 3 617 464 155 73 184 chr15 4242509 4242627 -99252347 + RMER17C LTR ERVK 185 277 -133 3 617 703 279 15 5 chr15 4242640 4242845 -99252129 - Lx7 LINE L1 -442 7254 7048 3 617 368 262 39 26 chr15 4242912 4242964 -99252010 + RMER10B LTR ERVL 193 245 -153 3 617 1359 62 0 0 chr15 4242964 4243142 -99251832 + (TTC)n Simple_repeat Simple_repeat 1 178 0 3 617 368 262 39 26 chr15 4243142 4243242 -99251732 + RMER10B LTR ERVL 246 347 -51 3 617 3302 50 0 0 chr15 4244362 4244758 -99250216 + MTA_Mm LTR MaLR 1 396 0 3 617 731 304 20 170 chr15 4244936 4245336 -99249638 - MTEb LTR MaLR -34 345 6 3 617 282 116 0 0 chr15 4245913 4245956 -99249018 + (TAA)n Simple_repeat Simple_repeat 2 44 0 3 617 395 163 63 24 chr15 4246225 4246351 -99248623 + Lx9 LINE L1 7513 7643 -1 3 617 22 0 0 0 chr15 4246352 4246374 -99248600 + AT_rich Low_complexity Low_complexity 1 22 0 3 617 26594 92 7 5 chr15 4246385 4251073 -99243901 + L1Md_F LINE L1 396 5091 -792 3 617 5289 27 5 0 chr15 4251740 4252362 -99242612 - L1Md_F3 LINE L1 0 6584 5960 3 617 288 222 12 24 chr15 4253534 4253617 -99241357 + GA-rich Low_complexity Low_complexity 3 84 0 3 617 232 145 0 52 chr15 4253645 4253703 -99241271 + GA-rich Low_complexity Low_complexity 4 58 0 3 617 785 221 37 52 chr15 4254067 4254394 -99240580 + MTD LTR MaLR 1 368 -51 3 617 290 363 44 0 chr15 4254408 4254499 -99240475 + MLT2D LTR ERVL 134 228 -236 3 617 309 323 22 30 chr15 4254534 4254668 -99240306 + MLT2D LTR ERVL 380 512 -48 3 617 445 272 166 6 chr15 4254672 4254853 -99240121 - MER2 DNA MER2_type -38 307 98 3 617 2307 109 39 14 chr15 4255237 4255601 -99239373 + Lx LINE L1 6276 6648 -6 3 617 277 274 52 10 chr15 4256473 4256569 -99238405 + MTEb LTR MaLR 272 371 -8 3 617 1230 283 13 76 chr15 4256952 4257349 -99237625 - MTEa LTR MaLR -7 372 1 3 617 202 371 144 31 chr15 4257376 4257765 -99237209 - L2 LINE L2 -1918 1501 1069 3 617 570 293 29 36 chr15 4258363 4258590 -99236384 + MTE2a LTR MaLR 30 230 -149 3 617 1245 78 6 6 chr15 4258544 4258711 -99236263 + LTRIS2 LTR ERV1 398 564 0 3 617 298 209 45 0 chr15 4259270 4259337 -99235637 + RMER16-int LTR ERVK 257 326 -5080 3 617 544 163 0 0 chr15 4259329 4259421 -99235553 + RMER16-int LTR ERVK 679 770 -4636 3 617 3430 113 23 21 chr15 4259422 4259991 -99234983 + RMER16-int LTR ERVK 875 1444 -3962 3 617 2672 205 157 11 chr15 4259982 4260762 -99234212 + MuRRS4-int LTR ERV1 760 1629 -3434 3 617 1305 51 0 0 chr15 4260762 4260940 -99234034 + (GA)n Simple_repeat Simple_repeat 1 178 0 3 617 7493 118 60 14 chr15 4260940 4263315 -99231659 + MuRRS4-int LTR ERV1 1117 4271 -792 3 617 820 239 26 0 chr15 4263306 4263532 -99231442 + MuRRS4-int LTR ERV1 4788 5019 -44 3 617 3595 58 4 34 chr15 4263535 4264032 -99230942 + LTRIS2 LTR ERV1 1 482 -82 3 617 743 104 9 0 chr15 4264032 4264147 -99230827 + (GA)n Simple_repeat Simple_repeat 1 116 0 3 617 453 309 28 50 chr15 4264147 4264361 -99230613 + MTE2a LTR MaLR 196 404 -15 3 617 309 109 0 0 chr15 4264938 4264984 -99229990 + (CCA)n Simple_repeat Simple_repeat 2 47 0 3 617 270 0 0 0 chr15 4266291 4266321 -99228653 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 4 617 827 241 41 20 chr15 4266381 4266576 -99228398 - B3 SINE B2 -13 203 5 4 617 26 30 0 0 chr15 4266867 4266900 -99228074 + AT_rich Low_complexity Low_complexity 1 33 0 4 617 1700 206 101 70 chr15 4266905 4267021 -99227953 - Lx9 LINE L1 -15 7629 7501 4 617 294 29 0 0 chr15 4267021 4267056 -99227918 + (TC)n Simple_repeat Simple_repeat 1 35 0 4 617 318 50 0 0 chr15 4267056 4267095 -99227879 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 617 1700 206 101 70 chr15 4267095 4267457 -99227517 - Lx9 LINE L1 -144 7500 7128 4 617 2481 187 20 34 chr15 4267457 4267993 -99226981 + RLTR24 LTR ERV1 1 529 0 4 617 1700 206 101 70 chr15 4267993 4268097 -99226877 - Lx9 LINE L1 -517 7127 7029 4 617 26 98 0 0 chr15 4268224 4268306 -99226668 + AT_rich Low_complexity Low_complexity 1 82 0 4 617 276 263 156 39 chr15 4268524 4268908 -99226066 - L1M2 LINE L1 -1449 4691 4263 4 617 272 333 10 0 chr15 4268948 4269050 -99225924 + L1M2 LINE L1 4837 4939 -1204 4 617 859 315 189 31 chr15 4269310 4269628 -99225346 + ORR1E LTR MaLR 1 368 -11 4 617 1957 104 44 3 chr15 4269628 4269926 -99225048 + L1_Mus4 LINE L1 6320 6629 -7 4 617 911 246 31 39 chr15 4269971 4270346 -99224628 + L1M2 LINE L1 5264 5638 -662 4 617 2456 345 77 51 chr15 4270443 4272200 -99222774 - RMER15-int LTR ERVL -3162 1837 44 4 617 324 0 0 0 chr15 4272200 4272236 -99222738 + (TTA)n Simple_repeat Simple_repeat 2 37 0 4 617 2456 345 77 51 chr15 4272236 4272267 -99222707 - RMER15-int LTR ERVL -4956 43 6 4 617 729 321 40 66 chr15 4272267 4272728 -99222246 - RMER15 LTR ERVL -3 572 3 4 617 650 162 7 0 chr15 4272794 4272930 -99222044 + (TA)n Simple_repeat Simple_repeat 2 138 0 4 617 534 259 137 42 chr15 4273093 4273412 -99221562 + RMER20B LTR ERVK 132 466 -50 4 617 303 267 185 30 chr15 4273663 4273798 -99221176 - MIRb SINE MIR -106 162 7 4 617 338 0 24 0 chr15 4274075 4274117 -99220857 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 617 223 180 32 16 chr15 4274419 4274481 -99220493 + A-rich Low_complexity Low_complexity 4 66 0 4 617 22 0 0 0 chr15 4274501 4274523 -99220451 + AT_rich Low_complexity Low_complexity 1 22 0 4 617 501 318 204 23 chr15 4275102 4275588 -99219386 + L2 LINE L2 2488 3061 -358 4 617 313 286 61 117 chr15 4275729 4275959 -99219015 + MLT1C LTR MaLR 1 217 -250 4 617 284 259 82 50 chr15 4275996 4276174 -99218800 + MLT1C LTR MaLR 251 467 0 4 617 243 61 0 0 chr15 4276399 4276432 -99218542 + (CAA)n Simple_repeat Simple_repeat 1 33 0 4 617 186 128 0 0 chr15 4277959 4277998 -99216976 + (T)n Simple_repeat Simple_repeat 1 39 0 4 617 450 94 0 0 chr15 4278329 4278393 -99216581 + (TG)n Simple_repeat Simple_repeat 2 65 0 4 617 5422 87 18 22 chr15 4278706 4279483 -99215491 + Lx3_Mus LINE L1 6236 7009 0 4 617 225 65 0 0 chr15 4279483 4279514 -99215460 + (TAAAA)n Simple_repeat Simple_repeat 1 31 0 4 617 741 292 103 60 chr15 4280338 4281219 -99213755 + L1M3 LINE L1 3811 4729 -1411 4 617 318 73 0 0 chr15 4281422 4281463 -99213511 - ORR1C1 LTR MaLR 0 378 338 4 617 2469 122 31 50 chr15 4281467 4281888 -99213086 - MTC LTR MaLR -8 413 1 4 617 327 295 61 18 chr15 4282063 4282177 -99212797 + L2a LINE L2 3058 3176 -250 4 617 805 232 144 10 chr15 4282243 4282548 -99212426 + L1_Rod LINE L1 4670 5015 -832 4 617 281 274 102 25 chr15 4282616 4282773 -99212201 + L1M5 LINE L1 3344 3512 -2634 4 617 236 322 11 0 chr15 4282876 4282963 -99212011 + Lx8 LINE L1 6830 6917 -556 4 617 282 281 43 86 chr15 4283081 4283221 -99211753 - RLTR41 LTR ERV1 -62 384 251 4 617 363 73 0 0 chr15 4283942 4283997 -99210977 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 617 229 298 105 18 chr15 4284140 4284311 -99210663 + L1M5 LINE L1 4088 4273 -1873 4 617 271 287 21 11 chr15 4284833 4284928 -99210046 + L1M5 LINE L1 4748 4843 -1303 4 617 384 202 25 16 chr15 4285330 4285451 -99209523 + Lx9 LINE L1 7516 7637 -7 4 617 802 179 25 19 chr15 4285677 4285836 -99209138 - RLTR13D4 LTR ERVK 0 1033 874 4 617 14809 85 5 8 chr15 4285866 4288682 -99206292 + L1Md_A LINE L1 458 3264 -2619 4 617 8020 49 4 4 chr15 4288700 4289696 -99205278 + L1Md_F3 LINE L1 5587 6582 -2 4 617 3898 120 243 12 chr15 4289716 4290473 -99204501 - RLTR13D4 LTR ERVK -101 932 1 4 617 322 302 113 79 chr15 4290550 4290841 -99204133 + L1ME2 LINE L1 5514 5814 -350 4 617 249 280 37 9 chr15 4290873 4290981 -99203993 + L1ME2 LINE L1 5882 5992 -172 4 617 299 273 69 80 chr15 4291146 4291171 -99203803 - B2_Mm1a SINE B2 -9 184 157 4 617 446 103 13 0 chr15 4291171 4291249 -99203725 + (TG)n Simple_repeat Simple_repeat 2 80 0 4 617 627 274 67 76 chr15 4291249 4291411 -99203563 - B3A SINE B2 -34 164 2 4 617 288 137 0 0 chr15 4291443 4291494 -99203480 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 4 617 27 29 0 0 chr15 4292073 4292107 -99202867 + AT_rich Low_complexity Low_complexity 1 34 0 4 617 1760 120 93 3 chr15 4292814 4293114 -99201860 - IAPEY3_LTR LTR ERVK -5 327 1 4 617 982 319 64 12 chr15 4293632 4293975 -99200999 + MLT1A0 LTR MaLR 1 361 -4 4 617 393 22 0 0 chr15 4295268 4295314 -99199660 + (TC)n Simple_repeat Simple_repeat 2 47 0 4 617 423 0 0 0 chr15 4295314 4295360 -99199614 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 617 180 0 0 0 chr15 4295589 4295609 -99199365 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 617 519 17 0 0 chr15 4295609 4295668 -99199306 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 617 372 288 7 83 chr15 4295668 4295812 -99199162 - RSINE1 SINE B4 -22 143 11 4 617 408 270 134 4 chr15 4296000 4296268 -99198706 + L1MA8 LINE L1 5728 6030 -261 4 617 5068 103 73 51 chr15 4297354 4298644 -99196330 - L1_Mus2 LINE L1 0 6566 5249 4 617 545 72 12 0 chr15 4298644 4298727 -99196247 + (TA)n Simple_repeat Simple_repeat 2 85 0 4 617 279 0 0 0 chr15 4298727 4298757 -99196217 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 617 1036 224 172 26 chr15 4298760 4299108 -99195866 - RLTR9E LTR ERVK -5 404 6 4 617 463 79 25 62 chr15 4299123 4299204 -99195770 - ETnERV2-int LTR ERVK 0 7406 7329 4 617 799 211 274 11 chr15 4299204 4299502 -99195472 - RLTR13D6 LTR ERVK -365 537 162 4 617 292 204 0 0 chr15 4299504 4299558 -99195416 - ETnERV2-int LTR ERVK -196 7210 7157 4 617 8245 218 35 22 chr15 4299558 4302185 -99192789 - ETnERV2-int LTR ERVK -2166 5240 1790 4 617 1032 147 0 11 chr15 4302423 4302602 -99192372 - ETnERV2-int LTR ERVK -1659 1655 1479 4 617 7448 157 53 52 chr15 4302644 4303582 -99191392 - ETnERV2-int LTR ERVK -1794 1520 538 4 617 181 250 132 0 chr15 4303582 4303650 -99191324 - MIR3 SINE MIR -37 171 95 4 617 7448 157 53 52 chr15 4303650 4304160 -99190814 - ETnERV2-int LTR ERVK -1794 537 2 4 617 1049 206 167 53 chr15 4304161 4304520 -99190454 - RLTR9E LTR ERVK 0 409 10 4 617 522 0 0 0 chr15 4304520 4304578 -99190396 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 617 3092 122 4 10 chr15 4304612 4305118 -99189856 - L1_Mm LINE L1 -722 5161 4659 4 617 221 0 35 0 chr15 4305120 4305149 -99189825 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 4 617 1096 58 0 0 chr15 4305153 4305290 -99189684 - B1_Mm SINE Alu -5 142 6 4 617 398 224 0 130 chr15 4305183 4305306 -99189668 - MT2B LTR ERVL -337 264 158 4 617 4633 124 1 0 chr15 4305321 4306084 -99188890 + L1_Mm LINE L1 3619 4382 -1501 4 617 2621 199 21 45 chr15 4306239 4306798 -99188176 - RLTR5_Mm LTR ERV1 0 628 83 4 617 2210 240 43 24 chr15 4306852 4307720 -99187254 + Lx9 LINE L1 5203 6114 -1530 4 617 1104 260 48 32 chr15 4307856 4308166 -99186808 + MTE2b LTR MaLR 61 375 -4 4 617 28 29 0 0 chr15 4309882 4309917 -99185057 + AT_rich Low_complexity Low_complexity 1 35 0 4 617 344 135 14 0 chr15 4310829 4310903 -99184071 + (GGGAGA)n Simple_repeat Simple_repeat 5 79 0 4 617 244 294 142 38 chr15 4311196 4311302 -99183672 - PB1D10 SINE Alu 0 117 1 4 617 264 257 163 7 chr15 4312311 4312452 -99182522 - Lx8 LINE L1 -10 7463 7301 4 617 216 0 0 0 chr15 4312458 4312482 -99182492 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 617 576 111 0 0 chr15 4312482 4312590 -99182384 + (GA)n Simple_repeat Simple_repeat 2 109 0 4 617 2784 295 72 19 chr15 4312596 4313648 -99181326 - Lx8 LINE L1 -189 7284 6177 4 617 1416 181 156 3 chr15 4313665 4313992 -99180982 - ORR1B1 LTR MaLR -8 386 10 4 617 224 122 0 24 chr15 4314003 4314045 -99180929 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 617 276 194 97 0 chr15 4314064 4314126 -99180848 - Lx8 LINE L1 -1306 6167 6100 4 617 2020 279 83 50 chr15 4314302 4314951 -99180023 - Lx8 LINE L1 -1 5879 5195 4 617 1132 234 192 0 chr15 4314951 4315263 -99179711 - ORR1D1 LTR MaLR -2 372 1 4 617 464 86 0 14 chr15 4315271 4315342 -99179632 + (TTA)n Simple_repeat Simple_repeat 1 70 0 4 617 2020 279 83 50 chr15 4315342 4315805 -99179169 - Lx8 LINE L1 -688 5192 4722 4 617 29 0 0 0 chr15 4317341 4317370 -99177604 + AT_rich Low_complexity Low_complexity 1 29 0 4 617 24 32 0 0 chr15 4317699 4317730 -99177244 + AT_rich Low_complexity Low_complexity 1 31 0 4 617 22 0 0 0 chr15 4317839 4317861 -99177113 + AT_rich Low_complexity Low_complexity 1 22 0 4 617 29 47 0 0 chr15 4318281 4318324 -99176650 + AT_rich Low_complexity Low_complexity 1 43 0 4 617 920 300 16 20 chr15 4318350 4318605 -99176369 + MTEa LTR MaLR 126 379 0 4 617 474 304 7 21 chr15 4318697 4318838 -99176136 + ID_B1 SINE B4 79 217 -7 4 617 291 343 109 18 chr15 4319774 4320169 -99174805 - L1MB2 LINE L1 -57 6123 5693 4 617 2454 148 16 3 chr15 4320918 4321292 -99173682 - ORR1B1 LTR MaLR 0 394 16 4 617 1714 106 0 8 chr15 4321717 4321983 -99172991 + L1_Mus4 LINE L1 6373 6636 0 4 617 186 191 0 0 chr15 4322010 4322052 -99172922 + GA-rich Low_complexity Low_complexity 2 43 0 4 617 1130 276 14 114 chr15 4322645 4323083 -99171891 + MTD LTR MaLR 6 399 -20 4 617 980 246 31 9 chr15 4323439 4323665 -99171309 + MLT2C2 LTR ERVL 8 238 -226 4 617 210 37 0 0 chr15 4325324 4325351 -99169623 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 618 666 161 0 32 chr15 4328052 4328238 -99166736 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 618 1968 92 27 20 chr15 4328319 4328618 -99166356 + L1Md_F2 LINE L1 6281 6581 -1 4 618 315 0 0 0 chr15 4329044 4329079 -99165895 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 618 201 39 0 0 chr15 4329394 4329420 -99165554 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 4 618 546 43 0 0 chr15 4329928 4329997 -99164977 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 618 21 36 0 0 chr15 4330139 4330167 -99164807 + AT_rich Low_complexity Low_complexity 1 28 0 4 618 684 264 27 6 chr15 4330179 4330362 -99164612 - B3A SINE B2 -11 187 1 4 618 312 356 12 24 chr15 4330584 4330751 -99164223 + MER5A1 DNA MER1_type 1 165 -1 5 618 23 33 0 0 chr15 4331281 4331311 -99163663 + AT_rich Low_complexity Low_complexity 1 30 0 5 618 459 0 0 0 chr15 4331526 4331577 -99163397 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 618 333 47 0 0 chr15 4332678 4332721 -99162253 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 618 25 0 0 0 chr15 4333999 4334024 -99160950 + AT_rich Low_complexity Low_complexity 1 25 0 5 618 222 37 0 0 chr15 4334572 4334599 -99160375 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 5 618 229 200 13 26 chr15 4334772 4334849 -99160125 + CT-rich Low_complexity Low_complexity 3 78 0 5 618 511 297 64 25 chr15 4335080 4335363 -99159611 - L1MB1 LINE L1 -139 6029 5736 5 618 291 307 66 6 chr15 4335584 4335751 -99159223 - L1MB1 LINE L1 -847 5293 5117 5 618 1074 309 89 33 chr15 4335877 4336452 -99158522 - Lx7 LINE L1 -365 7331 6725 5 618 531 0 0 0 chr15 4336520 4336579 -99158395 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 5 618 516 237 23 12 chr15 4336636 4336807 -99158167 - L1MB1 LINE L1 -1088 5052 4880 5 618 565 293 92 54 chr15 4336807 4337178 -99157796 - L1MB1 LINE L1 -2674 3469 3085 5 618 196 30 61 0 chr15 4337531 4337564 -99157410 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 5 618 1816 68 4 0 chr15 4338336 4338573 -99156401 - L1_Mus1 LINE L1 -1 6566 6329 5 618 1295 81 21 0 chr15 4338573 4338759 -99156215 - L1_Mus1 LINE L1 -463 6104 5915 5 618 4522 100 34 0 chr15 4338755 4339437 -99155537 + L1_Mus1 LINE L1 5177 5881 -2 5 618 228 393 14 35 chr15 4339994 4340139 -99154835 + MIRb SINE MIR 102 243 -25 5 618 22 0 0 0 chr15 4341300 4341322 -99153652 + AT_rich Low_complexity Low_complexity 1 22 0 5 618 606 291 98 30 chr15 4341329 4341595 -99153379 + B4A SINE B4 2 285 -7 5 618 363 314 177 8 chr15 4342371 4342625 -99152349 + L1MB3 LINE L1 5851 6147 -24 5 618 244 246 0 0 chr15 4342640 4342697 -99152277 + A-rich Low_complexity Low_complexity 1 57 0 5 618 568 171 24 211 chr15 4344584 4344873 -99150101 + Lx9 LINE L1 7403 7637 -7 5 618 390 100 0 0 chr15 4344946 4345006 -99149968 + (CATAT)n Simple_repeat Simple_repeat 3 62 0 5 618 380 271 60 6 chr15 4345117 4345284 -99149690 + L1MA5A LINE L1 5686 5861 -436 5 618 232 242 0 21 chr15 4346264 4346361 -99148613 + CT-rich Low_complexity Low_complexity 2 96 0 5 618 513 0 0 0 chr15 4346383 4346440 -99148534 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 618 911 294 101 11 chr15 4346569 4347105 -99147869 - L1MB3 LINE L1 -10 6173 5590 5 618 343 310 35 17 chr15 4348294 4348409 -99146565 + RSINE1 SINE B4 9 125 -40 5 618 2803 161 9 5 chr15 4348453 4348897 -99146077 - RLTR41 LTR ERV1 0 446 1 5 618 195 114 0 0 chr15 4348897 4348932 -99146042 + (GAA)n Simple_repeat Simple_repeat 3 37 0 5 618 269 266 76 0 chr15 4350423 4350502 -99144472 + MTEb LTR MaLR 294 378 -1 5 618 462 244 107 30 chr15 4350622 4350753 -99144221 + B1F1 SINE Alu 8 148 -1 5 618 621 100 0 0 chr15 4350962 4351052 -99143922 + (TG)n Simple_repeat Simple_repeat 1 90 0 5 618 300 206 3 21 chr15 4351238 4351327 -99143647 + MIR SINE MIR 103 194 -14 5 618 1088 328 68 8 chr15 4351399 4351799 -99143175 - MER68 LTR ERVL -139 424 1 5 618 30 0 0 0 chr15 4353751 4353781 -99141193 + AT_rich Low_complexity Low_complexity 1 30 0 5 618 340 365 62 37 chr15 4353818 4354091 -99140883 - HAL1 LINE L1 -93 2414 2135 5 618 340 339 46 68 chr15 4354605 4354928 -99140046 - HAL1 LINE L1 -781 1726 1411 5 618 266 243 37 9 chr15 4355075 4355183 -99139791 - HAL1 LINE L1 -1572 935 825 5 618 415 283 65 54 chr15 4355216 4355552 -99139422 + MER31B LTR ERV1 1 654 -7 5 618 2267 89 15 3 chr15 4356108 4356434 -99138540 - Lx3_Mus LINE L1 0 7009 6680 5 618 13345 106 10 4 chr15 4356434 4358477 -99136497 - L1_Mus2 LINE L1 -57 5826 3772 5 618 5236 89 15 25 chr15 4358477 4359229 -99135745 + L1_Mus2 LINE L1 5823 6566 0 5 618 2641 61 22 0 chr15 4359256 4359616 -99135358 - Lx3_Mus LINE L1 -314 6695 6328 5 618 680 142 14 7 chr15 4359613 4359767 -99135207 + Lx3_Mus LINE L1 5815 5975 -591 5 618 2790 83 9 7 chr15 4359752 4360176 -99134798 + Lx3_Mus LINE L1 5907 6331 -678 5 618 435 119 0 0 chr15 4361817 4361884 -99133090 + (A)n Simple_repeat Simple_repeat 1 67 0 5 618 25 0 0 0 chr15 4362571 4362596 -99132378 + AT_rich Low_complexity Low_complexity 1 25 0 5 618 820 293 53 10 chr15 4362640 4362943 -99132031 - Lx8 LINE L1 -118 7355 7040 5 618 25 51 0 0 chr15 4362943 4362982 -99131992 + AT_rich Low_complexity Low_complexity 1 39 0 5 618 6467 52 9 17 chr15 4363009 4363881 -99131093 - L1_Mus1 LINE L1 -1 6566 5702 5 618 522 0 0 0 chr15 4363881 4363939 -99131035 + (T)n Simple_repeat Simple_repeat 1 58 0 5 618 36335 29 1 0 chr15 4363940 4370788 -99124186 - L1Md_T LINE L1 -2 6583 1 5 618 3029 96 2 13 chr15 4370799 4371262 -99123712 + L1_Mm LINE L1 5242 5699 -184 5 618 288 328 83 30 chr15 4371725 4371857 -99123117 + MLT1A0 LTR MaLR 86 224 -141 5 618 2928 172 100 31 chr15 4371989 4372631 -99122343 - RMER6C LTR ERVK -4 686 1 5 618 366 315 74 92 chr15 4372911 4373016 -99121958 - LTR87 LTR ERVL? -44 580 488 5 618 1114 95 0 0 chr15 4373016 4373163 -99121811 + B1_Mus2 SINE Alu 1 147 0 5 618 366 315 74 92 chr15 4373163 4373274 -99121700 - LTR87 LTR ERVL? -137 487 368 5 618 25 0 0 0 chr15 4374227 4374252 -99120722 + AT_rich Low_complexity Low_complexity 1 25 0 5 618 891 256 0 0 chr15 4374305 4374500 -99120474 - B3 SINE B2 -17 199 5 5 618 21 0 0 0 chr15 4374564 4374585 -99120389 + AT_rich Low_complexity Low_complexity 1 21 0 5 618 339 299 0 11 chr15 4375042 4375130 -99119844 + B3 SINE B2 50 136 -80 5 618 216 304 109 0 chr15 4375498 4375590 -99119384 + B4 SINE B4 6 107 -185 5 618 2138 168 8 8 chr15 4375790 4376145 -99118829 - ORR1B2 LTR MaLR 0 367 13 5 618 441 0 0 0 chr15 4377934 4377983 -99116991 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 618 675 299 94 94 chr15 4378803 4379143 -99115831 - MLT1A0 LTR MaLR -23 342 3 5 618 1083 51 0 0 chr15 4379154 4379291 -99115683 - L1Md_F3 LINE L1 -743 5841 5705 5 618 5453 28 19 1 chr15 4379291 4379969 -99115005 + L1Md_F3 LINE L1 5874 6563 -21 5 618 236 100 25 0 chr15 4379969 4380009 -99114965 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 618 405 0 0 0 chr15 4380032 4380077 -99114897 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 618 233 321 12 12 chr15 4381047 4381132 -99113842 + Tigger5 DNA MER2_type 2321 2405 -1 5 618 378 115 0 0 chr15 4381437 4381498 -99113476 + (TC)n Simple_repeat Simple_repeat 1 61 0 5 618 388 0 39 0 chr15 4381498 4381550 -99113424 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 618 474 70 0 0 chr15 4381552 4381623 -99113351 + (CAGAGA)n Simple_repeat Simple_repeat 2 72 0 5 618 279 306 16 121 chr15 4381625 4381807 -99113167 - RSINE1 SINE B4 0 165 3 5 618 278 354 20 10 chr15 4381852 4381952 -99113022 - Helitron3Na_Mam RC Helitron -1 485 385 5 618 1152 267 83 14 chr15 4382492 4382842 -99112132 + MTE2b LTR MaLR 6 379 0 5 618 1347 58 0 0 chr15 4383101 4383274 -99111700 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 5 618 180 0 0 0 chr15 4383381 4383401 -99111573 + (A)n Simple_repeat Simple_repeat 1 20 0 5 618 438 314 139 0 chr15 4383689 4383861 -99111113 - B3A SINE B2 0 198 3 5 618 29 60 0 0 chr15 4383925 4383975 -99110999 + AT_rich Low_complexity Low_complexity 1 50 0 5 618 189 0 0 0 chr15 4384981 4385002 -99109972 + (T)n Simple_repeat Simple_repeat 1 21 0 5 618 1289 20 0 0 chr15 4385002 4385149 -99109825 - B1_Mm SINE Alu 0 147 1 5 618 1254 86 29 6 chr15 4385546 4385721 -99109253 - B2_Mm2 SINE B2 -14 181 3 5 618 739 251 94 5 chr15 4386395 4386587 -99108387 + MTD LTR MaLR 2 210 -209 5 618 417 199 289 20 chr15 4386637 4386786 -99108188 - B3 SINE B2 -27 189 1 5 618 828 100 0 0 chr15 4386838 4386958 -99108016 + (GAAA)n Simple_repeat Simple_repeat 2 121 0 5 618 565 294 45 0 chr15 4386958 4387135 -99107839 + MTD LTR MaLR 203 387 -32 5 618 2217 113 0 19 chr15 4387354 4387679 -99107295 - Lx2 LINE L1 -4 6993 6675 5 618 1104 133 0 0 chr15 4387852 4388032 -99106942 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 5 618 6643 82 23 0 chr15 4388070 4388981 -99105993 - Lx3_Mus LINE L1 -8 7001 6070 5 618 352 161 42 21 chr15 4388985 4389080 -99105894 + Lx3_Mus LINE L1 6014 6110 -899 5 618 571 286 40 26 chr15 4392082 4392233 -99102741 - ORR1D2 LTR MaLR -198 172 20 5 618 33 25 0 0 chr15 4392661 4392701 -99102273 + AT_rich Low_complexity Low_complexity 1 40 0 5 618 23 0 0 0 chr15 4392815 4392838 -99102136 + AT_rich Low_complexity Low_complexity 1 23 0 5 618 207 0 0 0 chr15 4393115 4393138 -99101836 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 618 201 74 0 0 chr15 4394159 4394186 -99100788 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 618 1185 76 0 0 chr15 4394506 4394651 -99100323 + B1_Mus2 SINE Alu 3 147 0 5 618 786 268 56 45 chr15 4394987 4395346 -99099628 - L1MA4A LINE L1 -233 5956 5594 5 618 381 210 37 59 chr15 4395362 4395549 -99099425 - Lx9 LINE L1 -4 7640 7458 5 618 311 149 14 0 chr15 4395550 4395624 -99099350 + (CATA)n Simple_repeat Simple_repeat 4 78 0 5 618 814 291 93 30 chr15 4395658 4396329 -99098645 - L1_Mur3 LINE L1 -337 5543 4866 5 618 21 0 0 0 chr15 4396414 4396435 -99098539 + AT_rich Low_complexity Low_complexity 1 21 0 5 618 342 0 0 0 chr15 4396821 4396859 -99098115 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 618 390 326 62 34 chr15 4396877 4397023 -99097951 - B3A SINE B2 -46 152 3 5 618 507 302 45 39 chr15 4397202 4397357 -99097617 - RSINE1 SINE B4 0 165 10 5 618 292 351 77 24 chr15 4397578 4397747 -99097227 - MLT1J LTR MaLR -35 477 300 5 618 971 204 52 136 chr15 4398469 4398888 -99096086 + ORR1C2 LTR MaLR 1 384 0 5 618 6781 82 8 1 chr15 4399581 4400669 -99094305 - L1Md_F2 LINE L1 -13 6569 5471 5 618 23 0 0 0 chr15 4400798 4400821 -99094153 + AT_rich Low_complexity Low_complexity 1 23 0 5 618 1167 141 42 0 chr15 4401234 4401425 -99093549 - RMER12 LTR ERVK -1120 202 4 5 618 297 280 93 0 chr15 4401622 4401697 -99093277 - B4 SINE B4 -169 123 42 6 618 260 272 85 102 chr15 4402082 4402258 -99092716 - MIRb SINE MIR -83 185 13 6 618 30282 97 7 2 chr15 4402816 4404643 -99090331 - L1_Mus1 LINE L1 -1 6566 4735 6 618 266 0 29 0 chr15 4404643 4404677 -99090297 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 618 30282 96 9 16 chr15 4404677 4409004 -99085970 - L1_Mus1 LINE L1 -1149 4734 432 6 618 554 90 0 0 chr15 4409042 4409110 -99085864 + L1_Mm LINE L1 5519 5586 -297 6 618 8034 46 5 2 chr15 4409110 4410103 -99084871 + L1Md_F2 LINE L1 5587 6582 0 6 618 313 77 50 25 chr15 4410305 4410385 -99084589 + T-rich Low_complexity Low_complexity 2 83 0 6 618 216 0 0 0 chr15 4411706 4411730 -99083244 + (T)n Simple_repeat Simple_repeat 1 24 0 6 618 3023 82 0 5 chr15 4412777 4413181 -99081793 - L1Md_F2 LINE L1 -13 6569 6168 6 618 21 36 0 0 chr15 4414040 4414068 -99080906 + AT_rich Low_complexity Low_complexity 1 28 0 6 618 2477 137 0 88 chr15 4414074 4414531 -99080443 - Lx3A LINE L1 -11 6970 6554 6 618 3578 144 2 22 chr15 4414706 4415110 -99079864 - Lx LINE L1 -5 6649 6255 6 618 2927 46 0 0 chr15 4415110 4415456 -99079518 + ORR1A1 LTR MaLR 1 346 0 6 618 3578 144 2 22 chr15 4415456 4415641 -99079333 - Lx LINE L1 -400 6254 6072 6 618 3907 94 20 10 chr15 4415641 4416252 -99078722 - Lx3_Mus LINE L1 -432 6577 5961 6 618 23652 75 28 16 chr15 4416238 4416927 -99078047 - L1_Mur1 LINE L1 -980 4906 4199 6 618 2942 35 9 0 chr15 4416927 4417270 -99077704 - ORR1A0 LTR MaLR 0 346 1 6 618 13861 55 11 1 chr15 4417270 4419044 -99075930 - ORR1A0-int LTR MaLR 0 1792 1 6 618 3088 17 0 0 chr15 4419044 4419390 -99075584 - ORR1A0 LTR MaLR 0 346 1 6 618 23652 75 28 16 chr15 4419390 4420110 -99074864 - L1_Mur1 LINE L1 -1688 4198 3475 6 618 1556 47 0 10 chr15 4420110 4420303 -99074671 - B2_Mm1t SINE B2 0 193 3 6 618 23652 96 44 12 chr15 4420303 4423659 -99071315 - L1_Mur1 LINE L1 -2412 3474 3 6 618 289 291 19 133 chr15 4425274 4425484 -99069490 - B3A SINE B2 -11 187 2 6 618 212 147 0 0 chr15 4425743 4425777 -99069197 + B3 SINE B2 2 35 -181 6 618 553 144 15 0 chr15 4425920 4426052 -99068922 + (TG)n Simple_repeat Simple_repeat 1 134 0 6 618 641 341 29 0 chr15 4426078 4426248 -99068726 + B3 SINE B2 37 211 -5 6 618 201 154 0 0 chr15 4426261 4426300 -99068674 + (CAA)n Simple_repeat Simple_repeat 1 39 0 6 618 341 345 41 27 chr15 4426640 4426786 -99068188 - MIRb SINE MIR -96 172 25 6 618 286 281 0 30 chr15 4426968 4427034 -99067940 - ID4 SINE ID -9 74 11 6 618 221 286 0 16 chr15 4427468 4427532 -99067442 + C-rich Low_complexity Low_complexity 2 64 0 6 618 30 0 0 0 chr15 4427680 4427710 -99067264 + AT_rich Low_complexity Low_complexity 1 30 0 6 618 378 302 72 19 chr15 4428411 4428652 -99066322 + L1MEd LINE L1 1265 1518 -5009 6 618 378 0 0 0 chr15 4428652 4428694 -99066280 + (GGAA)n Simple_repeat Simple_repeat 4 45 0 6 618 400 320 43 32 chr15 4428706 4428893 -99066081 + L1MEd LINE L1 1475 1663 -4864 6 618 327 79 0 31 chr15 4429208 4429273 -99065701 - L1Md_F2 LINE L1 0 6582 6520 6 618 209 163 20 0 chr15 4429328 4429377 -99065597 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 618 403 329 94 56 chr15 4429390 4429657 -99065317 - B4 SINE B4 -15 277 1 6 618 319 292 148 13 chr15 4429664 4429813 -99065161 + L1MEd LINE L1 2266 2434 -4123 6 618 5588 35 10 0 chr15 4429826 4430509 -99064465 + RLTR13B2 LTR ERVK 1 690 -132 6 618 6609 187 10 26 chr15 4430673 4432283 -99062691 + ETnERV3-int LTR ERVK 186 1685 -5568 6 618 27865 97 14 3 chr15 4432283 4436839 -99058135 + L1Md_F2 LINE L1 980 5585 -298 6 618 6837 98 14 3 chr15 4436840 4437812 -99057162 + L1Md_F2 LINE L1 5587 6569 -13 6 618 387 0 0 0 chr15 4437887 4437930 -99057044 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 618 333 245 47 0 chr15 4437932 4438038 -99056936 + L1MC1 LINE L1 5347 5457 -876 6 618 423 0 0 0 chr15 4438453 4438500 -99056474 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 618 222 118 0 0 chr15 4438500 4438533 -99056441 + (CG)n Simple_repeat Simple_repeat 1 34 0 6 618 1335 310 78 24 chr15 4438537 4439195 -99055779 - Lx9 LINE L1 -235 7409 6717 6 618 442 296 24 6 chr15 4439195 4439365 -99055609 + L1MC1 LINE L1 6141 6313 -20 6 618 24 0 0 0 chr15 4439696 4439720 -99055254 + AT_rich Low_complexity Low_complexity 1 24 0 6 618 1631 21 21 0 chr15 4440046 4440235 -99054739 + B2_Mm1t SINE B2 1 193 0 6 618 369 0 0 0 chr15 4440503 4440544 -99054430 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 618 200 164 33 0 chr15 4440560 4440621 -99054353 + (CAGAGA)n Simple_repeat Simple_repeat 4 66 0 6 618 247 256 67 15 chr15 4440635 4440770 -99054204 + L1MA9 LINE L1 6160 6301 -11 6 618 519 339 125 25 chr15 4441199 4441592 -99053382 + L1M5 LINE L1 3782 4213 -1933 6 618 244 314 92 7 chr15 4441645 4441786 -99053188 + L1M5 LINE L1 4466 4618 -1528 6 618 262 299 110 8 chr15 4443517 4443635 -99051339 - MIR SINE MIR -38 224 95 6 618 506 317 29 97 chr15 4443820 4444131 -99050843 + B4A SINE B4 1 290 -2 6 618 31 26 0 0 chr15 4444134 4444172 -99050802 + AT_rich Low_complexity Low_complexity 1 38 0 6 618 548 280 16 0 chr15 4444385 4444510 -99050464 - B1_Mur1 SINE Alu -5 144 18 6 618 252 315 54 122 chr15 4444422 4444570 -99050404 - MT2B LTR ERVL -341 260 123 6 618 2486 47 6 0 chr15 4444694 4445013 -99049961 + MTA_Mm LTR MaLR 22 342 -54 6 618 656 245 34 0 chr15 4446311 4446458 -99048516 + ORR1D2 LTR MaLR 1 152 -218 6 618 3661 43 2 0 chr15 4446461 4446903 -99048071 - L1Md_T LINE L1 -192 6390 5948 6 618 1284 61 6 11 chr15 4446903 4447085 -99047889 + L1Md_F3 LINE L1 6402 6582 -2 6 618 537 286 122 25 chr15 4447090 4447294 -99047680 + ORR1D2 LTR MaLR 144 367 -3 6 618 25 0 0 0 chr15 4447878 4447903 -99047071 + AT_rich Low_complexity Low_complexity 1 25 0 6 618 277 86 17 17 chr15 4448447 4448506 -99046468 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 6 618 533 219 24 8 chr15 4450482 4450606 -99044368 + RSINE1 SINE B4 11 136 -29 6 618 1175 48 7 0 chr15 4450849 4450995 -99043979 + B1_Mus1 SINE Alu 2 148 0 6 618 445 11 89 11 chr15 4450995 4451085 -99043889 + (CAAAAA)n Simple_repeat Simple_repeat 6 102 0 6 618 1097 90 13 0 chr15 4452965 4453121 -99041853 - B2_Mm1a SINE B2 -9 184 27 6 618 257 371 102 43 chr15 4453306 4453703 -99041271 - L2a LINE L2 -21 3405 2967 6 618 281 348 63 25 chr15 4454750 4454909 -99040065 + MER5A1 DNA MER1_type 2 166 0 6 618 185 0 40 0 chr15 4455622 4455647 -99039327 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 619 563 74 12 0 chr15 4457357 4457438 -99037536 + (GGA)n Simple_repeat Simple_repeat 2 83 0 6 619 585 219 24 0 chr15 4457433 4457597 -99037377 + GA-rich Low_complexity Low_complexity 1 168 0 6 619 1600 31 0 30 chr15 4458110 4458307 -99036667 - B2_Mm1a SINE B2 -1 192 2 6 619 310 91 14 43 chr15 4458312 4458381 -99036593 + (TTTTTG)n Simple_repeat Simple_repeat 6 72 0 6 619 501 211 129 8 chr15 4460267 4460391 -99034583 - B1_Mur4 SINE Alu -6 144 6 6 619 23 68 0 0 chr15 4460654 4460698 -99034276 + AT_rich Low_complexity Low_complexity 1 44 0 6 619 441 0 0 0 chr15 4461053 4461102 -99033872 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 6 619 1838 185 15 64 chr15 4461114 4461506 -99033468 - ORR1C1 LTR MaLR -1 377 5 6 619 327 316 121 12 chr15 4461513 4461686 -99033288 + L1M4 LINE L1 2511 2702 -3444 6 619 514 189 0 22 chr15 4461712 4461804 -99033170 + 4.5SRNA scRNA scRNA 1 90 -4 6 619 473 168 0 10 chr15 4461807 4461909 -99033065 + Lx2A1 LINE L1 6908 7008 0 6 619 234 316 73 49 chr15 4462869 4463115 -99031859 + Lx8 LINE L1 7167 7418 -55 6 619 4154 30 6 8 chr15 4463124 4463623 -99031351 + L1Md_F2 LINE L1 6085 6582 0 6 619 21 36 0 0 chr15 4463780 4463808 -99031166 + AT_rich Low_complexity Low_complexity 1 28 0 6 619 438 127 0 0 chr15 4463808 4463879 -99031095 + (GGAA)n Simple_repeat Simple_repeat 3 73 0 6 619 277 130 37 0 chr15 4463928 4463982 -99030992 + Lx8 LINE L1 7417 7472 -1 6 619 653 274 28 64 chr15 4465618 4465836 -99029138 - MTEb LTR MaLR 0 379 170 6 619 306 100 0 79 chr15 4465836 4465877 -99029097 + polypyrimidine Low_complexity Low_complexity 35 71 0 6 619 1179 117 0 0 chr15 4465877 4466057 -99028917 + (TC)n Simple_repeat Simple_repeat 1 180 0 6 619 306 100 0 79 chr15 4466057 4466091 -99028883 + polypyrimidine Low_complexity Low_complexity 2 34 0 6 619 384 291 124 25 chr15 4467476 4467687 -99027287 - MLT1B LTR MaLR -163 304 60 6 619 267 400 73 0 chr15 4467754 4467904 -99027070 - MIRb SINE MIR -57 211 51 6 619 351 0 0 0 chr15 4467963 4468002 -99026972 + (GA)n Simple_repeat Simple_repeat 1 39 0 6 619 24 32 0 0 chr15 4468124 4468155 -99026819 + AT_rich Low_complexity Low_complexity 1 31 0 6 619 487 121 97 21 chr15 4469237 4469330 -99025644 - RMER1C Other Other -4 1338 1239 6 619 298 389 25 35 chr15 4471531 4471728 -99023246 - MIRb SINE MIR -58 210 16 6 619 494 280 72 136 chr15 4472363 4472603 -99022371 - MER67D LTR ERV1 -150 364 133 6 619 1133 144 37 5 chr15 4472603 4472791 -99022183 + B2_Mm2 SINE B2 1 194 -1 6 619 494 280 72 136 chr15 4472791 4472875 -99022099 - MER67D LTR ERV1 -382 132 61 6 619 3521 124 2 11 chr15 4472875 4473407 -99021567 + Lx LINE L1 6126 6652 -2 6 619 494 280 72 136 chr15 4473407 4473457 -99021517 - MER67D LTR ERV1 -454 60 13 6 619 244 267 9 106 chr15 4474191 4474304 -99020670 + MT2B LTR ERVL 156 257 -344 6 619 509 209 12 7 chr15 4474206 4474319 -99020655 + B1_Mus1 SINE Alu 5 114 -6 6 619 186 354 60 12 chr15 4474341 4474424 -99020550 - MIR SINE MIR -78 130 44 6 619 212 0 36 0 chr15 4475275 4475303 -99019671 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 619 935 69 69 0 chr15 4475303 4475433 -99019541 - B1_Mm SINE Alu -8 139 1 6 619 203 260 40 0 chr15 4475442 4475492 -99019482 - MER5A DNA MER1_type -45 144 93 6 619 8292 104 4 2 chr15 4476100 4477315 -99017659 + L1_Mm LINE L1 3742 4959 -924 6 619 2772 162 6 61 chr15 4477315 4477854 -99017120 - ORR1A3-int LTR MaLR -1453 510 2 6 619 2000 118 9 77 chr15 4477855 4478204 -99016770 - ORR1A3 LTR MaLR 0 326 2 6 619 367 259 60 30 chr15 4478208 4478375 -99016599 + Lx6 LINE L1 7288 7459 -1 7 619 1380 84 16 5 chr15 4478376 4478567 -99016407 + B2_Mm2 SINE B2 1 193 -2 7 619 528 329 149 32 chr15 4478569 4478917 -99016057 - MER90 LTR ERV1 -184 391 3 7 619 463 143 19 93 chr15 4479574 4479682 -99015292 - PB1D9 SINE Alu -12 108 9 7 619 21 57 0 0 chr15 4480067 4480102 -99014872 + AT_rich Low_complexity Low_complexity 1 35 0 7 619 21 0 0 0 chr15 4480138 4480159 -99014815 + AT_rich Low_complexity Low_complexity 1 21 0 7 619 222 37 0 0 chr15 4481646 4481673 -99013301 + (T)n Simple_repeat Simple_repeat 1 27 0 7 619 510 269 89 42 chr15 4482208 4482398 -99012576 + B4A SINE B4 56 254 -38 7 619 495 0 0 0 chr15 4482476 4482531 -99012443 + (TC)n Simple_repeat Simple_repeat 1 55 0 7 619 243 0 0 0 chr15 4482531 4482557 -99012417 + (CA)n Simple_repeat Simple_repeat 1 27 0 7 619 454 308 53 6 chr15 4483481 4483651 -99011323 - MER20 DNA MER1_type -7 212 35 7 619 534 356 81 42 chr15 4483881 4484288 -99010686 - MARNA DNA Mariner -153 433 11 7 619 1187 48 7 0 chr15 4484361 4484507 -99010467 - B1_Mm SINE Alu 0 147 1 7 619 378 0 0 0 chr15 4484947 4484989 -99009985 + (TAA)n Simple_repeat Simple_repeat 2 43 0 7 619 360 164 0 0 chr15 4485767 4485834 -99009140 + (CAT)n Simple_repeat Simple_repeat 3 69 0 7 619 29 47 0 0 chr15 4487404 4487447 -99007527 + AT_rich Low_complexity Low_complexity 1 43 0 7 619 249 369 0 92 chr15 4488193 4488357 -99006617 + L2a LINE L2 3277 3425 -1 7 619 1197 141 0 0 chr15 4488605 4488796 -99006178 - B2_Mm2 SINE B2 0 195 5 7 619 2667 80 12 43 chr15 4489229 4489343 -99005631 + L1Md_F2 LINE L1 6176 6287 -295 7 619 3215 40 25 0 chr15 4489343 4489744 -99005230 - RLTR10A LTR ERVK 0 411 1 7 619 2667 80 12 43 chr15 4489744 4490061 -99004913 + L1Md_F2 LINE L1 6288 6582 0 7 619 2667 80 12 43 chr15 4490061 4490087 -99004887 + L1Md_F2 LINE L1 6560 6582 0 7 619 201 196 0 0 chr15 4490848 4490894 -99004080 + (CATA)n Simple_repeat Simple_repeat 1 46 0 7 619 582 211 6 0 chr15 4490896 4491075 -99003899 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 619 1126 269 91 15 chr15 4491702 4492042 -99002932 + MTE2b LTR MaLR 6 371 -8 7 619 299 242 10 0 chr15 4492207 4492306 -99002668 + (TA)n Simple_repeat Simple_repeat 2 101 0 7 619 225 0 0 0 chr15 4492307 4492332 -99002642 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 619 1541 298 105 29 chr15 4492347 4492965 -99002009 - Lx8 LINE L1 -36 7437 6773 7 619 541 281 116 0 chr15 4493056 4493202 -99001772 + B3A SINE B2 14 176 -22 7 619 195 42 0 0 chr15 4493357 4493381 -99001593 + (T)n Simple_repeat Simple_repeat 1 24 0 7 619 227 228 165 0 chr15 4496513 4496592 -98998382 + L1MC2 LINE L1 6250 6341 -3 7 619 2241 203 39 2 chr15 4496593 4497101 -98997873 - RLTR11A2 LTR ERVK 0 527 1 7 619 182 362 26 71 chr15 4497892 4498005 -98996969 + L2b LINE L2 3250 3357 -18 7 619 3512 90 84 2 chr15 4499017 4499540 -98995434 + Lx3_Mus LINE L1 6444 7009 0 7 619 23 0 0 0 chr15 4499540 4499563 -98995411 + AT_rich Low_complexity Low_complexity 1 23 0 7 619 22 0 0 0 chr15 4500453 4500475 -98994499 + AT_rich Low_complexity Low_complexity 1 22 0 1 619 252 264 78 78 chr15 4501428 4501543 -98993431 + ID_B1 SINE B4 78 192 -32 2 619 708 12 0 0 chr15 4501624 4501705 -98993269 + (CA)n Simple_repeat Simple_repeat 2 82 0 3 619 227 31 31 0 chr15 4501706 4501738 -98993236 + (CAGAGA)n Simple_repeat Simple_repeat 4 36 0 4 619 21 0 0 0 chr15 4502517 4502538 -98992436 + AT_rich Low_complexity Low_complexity 1 21 0 5 619 710 95 8 0 chr15 4503373 4503499 -98991475 + (GA)n Simple_repeat Simple_repeat 2 128 0 6 619 2983 208 67 29 chr15 4506282 4507078 -98987896 - Lx9 LINE L1 0 7644 6819 7 619 1049 209 14 23 chr15 4507325 4507541 -98987433 - URR1A DNA MER1_type 0 226 13 8 619 520 390 78 35 chr15 4507858 4508230 -98986744 - LTR16A LTR ERVL -2 449 62 9 619 500 260 134 57 chr15 4508450 4508890 -98986084 + L1MA6 LINE L1 5678 6149 -151 1 619 1122 147 59 9 chr15 4509581 4509871 -98985103 - RLTR1B-int LTR ERV1 -486 2813 2669 1 619 668 34 0 33 chr15 4509858 4509950 -98985024 - RLTR1B-int LTR ERV1 -744 2555 2467 1 619 2907 71 81 46 chr15 4510087 4510546 -98984428 - IAPLTR2_Mm LTR ERVK 0 475 1 1 619 944 192 40 32 chr15 4510580 4510828 -98984146 + MuRRS4-int LTR ERV1 4788 5037 -26 1 619 2988 81 24 5 chr15 4510828 4511237 -98983737 + LTRIS2 LTR ERV1 69 485 -79 1 619 5793 133 2 11 chr15 4512601 4513567 -98981407 + L1_Mm LINE L1 4812 5768 -115 1 619 5894 61 15 0 chr15 4513568 4514317 -98980657 + L1_Mus3 LINE L1 5873 6632 -6 1 619 492 18 0 0 chr15 4514353 4514410 -98980564 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 619 274 298 8 24 chr15 4515695 4515711 -98979263 + Lx7 LINE L1 5782 5795 -1901 1 619 1747 95 8 0 chr15 4515711 4515954 -98979020 - L1_Mus3 LINE L1 -1 6637 6393 1 619 3905 103 0 15 chr15 4515954 4516528 -98978446 + L1_Mus3 LINE L1 5800 6373 -265 1 619 4235 77 0 11 chr15 4516528 4517089 -98977885 + L1_Mus1 LINE L1 6013 6567 0 2 619 3905 103 0 15 chr15 4517089 4517108 -98977866 + L1_Mus3 LINE L1 6374 6384 -254 1 619 290 322 22 11 chr15 4517159 4517250 -98977724 + MLT1A LTR MaLR 232 323 -51 2 619 309 338 44 83 chr15 4517411 4517640 -98977334 + MER106A DNA MER1_type 2 221 -15 2 619 342 0 0 0 chr15 4517962 4518000 -98976974 + (TAA)n Simple_repeat Simple_repeat 3 40 0 2 619 241 326 127 28 chr15 4518689 4518706 -98976268 + B4 SINE B4 68 98 -194 2 619 478 254 40 95 chr15 4518706 4518832 -98976142 + B1_Mus2 SINE Alu 1 119 -1 2 619 797 306 102 47 chr15 4519490 4520261 -98974713 - L1MA6 LINE L1 -1 6299 5486 2 619 378 0 0 0 chr15 4520262 4520304 -98974670 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 619 438 314 75 54 chr15 4520463 4521039 -98973935 - L1MA6 LINE L1 -775 5368 4781 2 619 1931 316 118 21 chr15 4521056 4522037 -98972937 + MTE-int LTR MaLR 366 1553 -27 2 619 1287 206 11 18 chr15 4522049 4522326 -98972648 - Lx9 LINE L1 -344 7300 7026 2 619 820 283 178 42 chr15 4522410 4522742 -98972232 + MTEb LTR MaLR 1 377 -2 3 619 453 342 0 0 chr15 4523173 4523293 -98971681 - RSINE1 SINE B4 -43 122 3 3 619 998 81 0 49 chr15 4523744 4523887 -98971087 + B1_Mus2 SINE Alu 2 137 -10 3 619 375 23 0 0 chr15 4523887 4523931 -98971043 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 619 1448 44 0 16 chr15 4523938 4524124 -98970850 - L1_Mus1 LINE L1 -275 6292 6110 3 619 2029 40 24 0 chr15 4524125 4524373 -98970601 + L1_Mus1 LINE L1 6312 6565 -2 3 619 689 313 12 6 chr15 4524395 4524559 -98970415 + RSINE1 SINE B4 1 165 0 3 619 425 309 14 15 chr15 4526770 4526904 -98968070 + B1F SINE Alu 1 149 0 3 619 197 167 19 0 chr15 4527416 4527470 -98967504 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 3 619 378 42 0 0 chr15 4528298 4528346 -98966628 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 619 264 318 89 39 chr15 4529913 4530093 -98964881 - MER53 DNA hAT 0 193 5 3 619 465 19 0 0 chr15 4531588 4531642 -98963332 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 4 619 941 140 0 0 chr15 4531643 4531779 -98963195 - B1_Mus1 SINE Alu -12 136 1 4 619 1625 234 17 39 chr15 4532003 4532363 -98962611 - MTD LTR MaLR 0 419 68 4 619 642 275 0 7 chr15 4532398 4532537 -98962437 - B1_Mur2 SINE Alu -10 139 2 4 619 302 357 6 19 chr15 4533292 4533452 -98961522 + CT-rich Low_complexity Low_complexity 3 160 0 4 619 39532 4 0 0 chr15 4533842 4540219 -98954755 - L1Md_A LINE L1 0 6582 205 4 619 340 266 120 34 chr15 4541565 4541682 -98953292 + RSINE1 SINE B4 5 131 -34 4 619 369 0 0 0 chr15 4541682 4541723 -98953251 + (TC)n Simple_repeat Simple_repeat 1 41 0 4 619 234 0 0 0 chr15 4541723 4541748 -98953226 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 619 597 64 0 0 chr15 4541845 4541923 -98953051 + (TG)n Simple_repeat Simple_repeat 1 78 0 4 619 363 48 48 0 chr15 4541923 4541985 -98952989 + (GA)n Simple_repeat Simple_repeat 2 66 0 5 619 2152 138 8 3 chr15 4542261 4542618 -98952356 - RLTR15 LTR ERVK 0 359 1 5 619 316 311 51 15 chr15 4543236 4543373 -98951601 - LTR65 LTR ERV1 -284 385 244 5 619 242 294 63 49 chr15 4543410 4543553 -98951421 - LTR65 LTR ERV1 -524 145 1 5 619 256 359 56 77 chr15 4543574 4543770 -98951204 - MLT1K LTR MaLR -18 577 386 5 619 22 0 0 0 chr15 4543988 4544010 -98950964 + AT_rich Low_complexity Low_complexity 1 22 0 5 619 24 0 0 0 chr15 4544280 4544304 -98950670 + AT_rich Low_complexity Low_complexity 1 24 0 5 619 187 29 86 0 chr15 4545203 4545238 -98949736 + (TATAA)n Simple_repeat Simple_repeat 3 40 0 5 619 1410 155 42 68 chr15 4545500 4545828 -98949146 + RLTRETN_Mm LTR ERVK 1 406 -3 5 619 4854 71 3 17 chr15 4545828 4546516 -98948458 + ETnERV-int LTR ERVK 12 689 -2625 5 619 14528 124 26 24 chr15 4546507 4549427 -98945547 + ETnERV2-int LTR ERVK 3219 7208 -198 5 619 1574 130 43 61 chr15 4549427 4549755 -98945219 + RLTRETN_Mm LTR ERVK 1 322 0 5 619 260 219 27 0 chr15 4549948 4550021 -98944953 + CT-rich Low_complexity Low_complexity 1 75 0 5 619 1043 103 7 0 chr15 4550885 4551030 -98943944 + B1_Mus2 SINE Alu 1 146 -1 6 619 205 86 0 28 chr15 4551031 4551067 -98943907 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 6 619 3411 159 56 0 chr15 4552884 4553456 -98941518 - Lx4A LINE L1 0 7058 6455 6 619 239 311 11 22 chr15 4553933 4554025 -98940949 - L2a LINE L2 0 3426 3336 6 619 1202 35 23 0 chr15 4554452 4554624 -98940350 + (TAGA)n Simple_repeat Simple_repeat 2 177 0 6 619 696 342 5 5 chr15 4554629 4554823 -98940151 - ID_B1 SINE B4 -30 194 1 6 619 987 122 6 11 chr15 4555228 4555300 -98939674 + (GAAA)n Simple_repeat Simple_repeat 2 74 0 6 619 1025 136 11 0 chr15 4555300 4555476 -98939498 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 6 619 987 122 6 11 chr15 4555476 4555577 -98939397 + (GAAA)n Simple_repeat Simple_repeat 3 102 0 6 619 267 203 0 0 chr15 4555570 4555629 -98939345 + GA-rich Low_complexity Low_complexity 3 61 0 6 619 338 238 35 35 chr15 4555629 4555716 -98939258 + HAL1-3A_ME LINE L1 2284 2370 -488 7 619 192 77 0 0 chr15 4555954 4555980 -98938994 + (TTG)n Simple_repeat Simple_repeat 2 27 0 7 619 183 42 0 0 chr15 4556119 4556143 -98938831 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 619 1594 217 36 25 chr15 4556491 4556884 -98938090 - Lx6 LINE L1 -4 7456 7060 7 619 1351 229 42 57 chr15 4556890 4557203 -98937771 + Lx6 LINE L1 5670 5965 -1495 7 619 974 147 188 10 chr15 4557203 4557395 -98937579 + URR1A DNA MER1_type 1 226 0 7 619 1351 229 42 57 chr15 4557395 4557506 -98937468 + Lx6 LINE L1 5966 6088 -1372 7 619 1829 161 33 3 chr15 4557517 4557854 -98937120 + Lx4A LINE L1 6567 6913 -145 7 619 34616 41 1 16 chr15 4557934 4563061 -98931913 + L1Md_A LINE L1 542 5586 -297 7 619 8298 30 11 0 chr15 4563061 4564046 -98930928 + L1Md_A LINE L1 5587 6582 0 7 619 306 289 69 21 chr15 4564066 4564122 -98930852 - Lx9 LINE L1 -1175 6469 6412 7 619 245 29 29 0 chr15 4564122 4564156 -98930818 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 619 306 289 69 21 chr15 4564156 4564244 -98930730 - Lx9 LINE L1 -1233 6411 6318 7 619 27252 115 15 18 chr15 4564334 4569078 -98925896 - L1_Mus1 LINE L1 -11 6556 1815 8 619 4306 53 2 4 chr15 4569078 4569612 -98925362 + L1Md_F2 LINE L1 6047 6579 -3 8 619 27252 117 15 22 chr15 4569612 4569938 -98925036 - L1_Mus1 LINE L1 -4069 1814 1503 8 619 3335 134 35 95 chr15 4569938 4570735 -98924239 - RMER17A LTR ERVK -2 749 1 8 619 27252 79 17 31 chr15 4570735 4572017 -98922957 - L1_Mus1 LINE L1 -4381 1502 241 8 619 724 275 38 53 chr15 4572026 4572368 -98922606 - L1_Rod LINE L1 -2017 3830 3494 8 619 1140 77 6 6 chr15 4572411 4572580 -98922394 - L1_Mm LINE L1 -1015 4868 4700 8 619 300 216 11 22 chr15 4572593 4572683 -98922291 - L1_Rod LINE L1 -2562 3285 3197 8 619 205 158 50 50 chr15 4573160 4573220 -98921754 + T-rich Low_complexity Low_complexity 5 64 0 8 619 192 213 85 0 chr15 4573590 4573637 -98921337 - L2a LINE L2 0 3426 3376 8 619 426 97 0 0 chr15 4573870 4573932 -98921042 - ORR1B1 LTR MaLR -4 390 329 8 619 4560 104 27 16 chr15 4573932 4575090 -98919884 + Lx3A LINE L1 5172 6328 -653 8 619 2814 100 30 14 chr15 4575090 4575516 -98919458 + Lx3A LINE L1 6542 6974 -7 8 619 1853 197 21 3 chr15 4575540 4575871 -98919103 - ORR1B1 LTR MaLR -57 337 1 8 619 1795 257 74 30 chr15 4577982 4578786 -98916188 + RMER1B Other Other 42 1062 -4 8 619 272 262 16 0 chr15 4578967 4579028 -98915946 + L4 LINE RTE 1585 1646 -383 9 619 238 351 64 70 chr15 4579073 4579260 -98915714 + MLT1J LTR MaLR 69 254 -258 9 619 373 303 55 63 chr15 4581018 4581145 -98913829 - RSINE1 SINE B4 -38 127 2 9 619 28719 114 22 13 chr15 4583085 4585747 -98909227 + L1Md_F2 LINE L1 145 2820 -3063 9 619 3395 30 5 0 chr15 4585747 4586141 -98908833 - MTA_Mm LTR MaLR 0 396 1 9 77 28719 88 10 9 chr15 4586141 4588890 -98906084 + L1Md_F2 LINE L1 2821 5586 -297 9 620 7387 88 0 4 chr15 4588891 4589889 -98905085 + L1Md_F2 LINE L1 5588 6581 -1 9 620 266 0 0 29 chr15 4590260 4590295 -98904679 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 9 620 400 314 39 91 chr15 4590308 4590462 -98904512 + RSINE1 SINE B4 2 147 -18 9 620 332 297 84 8 chr15 4590745 4590864 -98904110 + B1F SINE Alu 9 136 -13 9 620 432 0 0 0 chr15 4590965 4591013 -98903961 + (CA)n Simple_repeat Simple_repeat 2 49 0 9 620 285 75 0 0 chr15 4591013 4591053 -98903921 + (TATG)n Simple_repeat Simple_repeat 3 42 0 9 620 31 26 0 0 chr15 4591129 4591167 -98903807 + AT_rich Low_complexity Low_complexity 1 38 0 1 620 1314 156 5 5 chr15 4591564 4591783 -98903191 - URR1A DNA MER1_type -7 219 1 1 620 184 333 84 42 chr15 4592282 4592401 -98902573 - L2 LINE L2 -549 2870 2747 1 620 231 387 25 0 chr15 4592784 4592903 -98902071 + MLT1J2 LTR MaLR 62 183 -265 1 620 25 90 0 0 chr15 4593453 4593520 -98901454 + AT_rich Low_complexity Low_complexity 1 67 0 1 620 303 83 34 56 chr15 4593527 4593616 -98901358 + (TTTA)n Simple_repeat Simple_repeat 1 87 0 1 620 286 288 8 33 chr15 4595776 4595821 -98899153 + Lx9 LINE L1 6369 6410 -1234 1 620 198 0 0 0 chr15 4595821 4595843 -98899131 + (CAAA)n Simple_repeat Simple_repeat 4 25 0 1 620 286 288 8 33 chr15 4595843 4595919 -98899055 + Lx9 LINE L1 6411 6486 -1158 1 620 817 242 28 12 chr15 4595979 4596226 -98898748 + Lx9 LINE L1 6750 7000 -644 1 620 2035 179 25 42 chr15 4596223 4596702 -98898272 - L1_Mur3 LINE L1 -484 5396 4926 1 620 810 161 99 40 chr15 4596717 4596970 -98898004 - L1_Mur3 LINE L1 -2555 3325 3058 1 620 1580 225 103 72 chr15 4596981 4597287 -98897687 + Lx7 LINE L1 7010 7326 -370 1 620 198 0 0 0 chr15 4597287 4597309 -98897665 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 1 620 1580 225 103 72 chr15 4597309 4597653 -98897321 + Lx7 LINE L1 7327 7680 -16 1 620 450 0 0 0 chr15 4598061 4598111 -98896863 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 620 507 187 7 14 chr15 4599361 4599502 -98895472 + Lx9 LINE L1 7499 7638 -6 1 620 606 279 21 16 chr15 4600078 4600271 -98894703 - Lx6 LINE L1 -5 7455 7262 1 620 27 29 0 0 chr15 4600880 4600914 -98894060 + AT_rich Low_complexity Low_complexity 1 34 0 1 620 236 323 7 43 chr15 4602127 4602266 -98892708 + GA-rich Low_complexity Low_complexity 4 137 0 1 620 770 123 47 80 chr15 4602427 4602577 -98892397 - B1_Mur4 SINE Alu -1 149 5 1 620 799 127 76 29 chr15 4602688 4602859 -98892115 + L1Md_F3 LINE L1 6406 6584 0 1 620 272 45 68 0 chr15 4602906 4602950 -98892024 + (TAAAA)n Simple_repeat Simple_repeat 3 49 0 1 620 321 26 0 0 chr15 4603033 4603071 -98891903 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1 620 1027 226 68 8 chr15 4603075 4603338 -98891636 - Lx7 LINE L1 -402 7294 7016 1 620 30007 95 11 13 chr15 4604432 4609815 -98885159 + L1Md_F2 LINE L1 242 5586 -297 1 620 7657 70 0 22 chr15 4609816 4610846 -98884128 + L1Md_F2 LINE L1 5588 6582 0 1 620 6895 137 6 4 chr15 4610855 4612198 -98882776 - L1_Mus4 LINE L1 -651 5985 4639 1 620 3837 142 2 27 chr15 4612200 4612837 -98882137 + L1_Mus4 LINE L1 6009 6629 -7 1 620 3082 238 31 6 chr15 4613084 4613791 -98881183 + Lx5 LINE L1 6323 7047 -3 1 620 540 276 128 18 chr15 4614228 4614346 -98880628 - Lx8 LINE L1 -2 7471 7328 1 620 3041 64 28 3 chr15 4614346 4614736 -98880238 + MTB LTR MaLR 1 400 0 1 620 540 276 128 18 chr15 4614736 4614890 -98880084 - Lx8 LINE L1 -146 7327 7169 1 620 1912 280 102 30 chr15 4614919 4615542 -98879432 - Lx8 LINE L1 -451 7022 6330 1 620 405 0 0 0 chr15 4615542 4615587 -98879387 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 1 620 1912 280 102 30 chr15 4615587 4615721 -98879253 - Lx8 LINE L1 -1144 6329 6211 1 620 1010 214 15 5 chr15 4615723 4615920 -98879054 + MTC LTR MaLR 18 216 -205 1 620 24 0 0 0 chr15 4615930 4615954 -98879020 + AT_rich Low_complexity Low_complexity 1 24 0 1 620 509 171 0 0 chr15 4615954 4616036 -98878938 - B1_Mur4 SINE Alu 0 150 69 1 620 35854 31 1 7 chr15 4616102 4623000 -98871974 - L1Md_T LINE L1 0 6585 1 1 620 886 254 40 30 chr15 4623059 4623363 -98871611 + Lx8 LINE L1 7165 7471 -2 1 620 258 176 0 0 chr15 4624726 4624777 -98870197 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 620 277 363 118 25 chr15 4624809 4624970 -98870004 - Lx8 LINE L1 -146 7327 7152 1 620 359 332 45 29 chr15 4625541 4625783 -98869191 + L1M5 LINE L1 3629 3874 -2272 1 620 242 214 0 0 chr15 4626168 4626210 -98868764 - B3A SINE B2 -156 42 1 1 620 230 412 71 62 chr15 4626745 4626970 -98868004 - LTR81A LTR ERV1? -678 672 446 1 620 993 288 23 53 chr15 4627084 4627385 -98867589 + B4A SINE B4 1 292 0 1 620 420 20 0 0 chr15 4627415 4627464 -98867510 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 620 761 284 56 60 chr15 4627475 4627726 -98867248 + B4A SINE B4 43 292 0 1 620 234 0 0 0 chr15 4627823 4627849 -98867125 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 620 1107 89 7 0 chr15 4627859 4628005 -98866969 - B1_Mus1 SINE Alu -1 147 1 1 620 735 333 42 18 chr15 4629734 4629951 -98865023 + B4 SINE B4 34 255 -37 1 620 373 19 0 0 chr15 4630535 4630587 -98864387 - L1Md_T LINE L1 0 6582 6531 1 620 459 0 0 0 chr15 4631071 4631122 -98863852 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 620 7233 77 2 0 chr15 4631122 4632231 -98862743 - L1_Mus1 LINE L1 -2 6565 5455 1 620 2253 117 11 36 chr15 4632231 4632594 -98862380 + IAPEY2_LTR LTR ERVK 1 354 -3 1 620 3298 163 70 21 chr15 4632599 4633313 -98861661 + IAPEy-int LTR ERVK 1 749 -6764 1 620 325 137 103 21 chr15 4633355 4633452 -98861522 + IAPEy-int LTR ERVK 848 952 -6629 1 620 1128 189 74 16 chr15 4633564 4633806 -98861168 + RMER16-int LTR ERVK 251 506 -4900 1 620 421 71 0 0 chr15 4633898 4633954 -98861020 + IAPEy-int LTR ERVK 3567 3622 -3784 1 620 567 49 24 12 chr15 4633953 4634035 -98860939 + IAPEy-int LTR ERVK 4567 4649 -2932 1 620 3191 84 0 14 chr15 4634314 4634760 -98860214 + IAPEy-int LTR ERVK 5203 5642 -1939 1 620 3332 75 0 7 chr15 4634751 4635208 -98859766 + IAPEy-int LTR ERVK 5761 6214 -1367 1 620 4191 104 0 6 chr15 4635198 4635828 -98859146 + IAPEy-int LTR ERVK 6735 7360 -153 1 620 1222 105 21 5 chr15 4635834 4636026 -98858948 + IAPEY2_LTR LTR ERVK 160 354 -3 1 620 22786 113 13 3 chr15 4636029 4639700 -98855274 - L1_Mus1 LINE L1 -421 5462 1753 1 620 274 358 16 47 chr15 4640037 4640166 -98854808 - MER47B DNA MER2_type -188 230 106 1 620 207 0 0 0 chr15 4640222 4640245 -98854729 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 620 4183 109 59 1 chr15 4640246 4641535 -98853439 - L1Md_F LINE L1 -4117 1766 400 1 620 293 323 48 0 chr15 4641570 4641663 -98853311 + PB1D10 SINE Alu 7 112 -202 1 620 233 228 0 12 chr15 4642304 4642384 -98852590 + GA-rich Low_complexity Low_complexity 68 146 0 1 620 6940 112 17 1 chr15 4645270 4647107 -98847867 - L1_Mus3 LINE L1 -19 6619 4761 1 620 7397 97 29 28 chr15 4647107 4648205 -98846769 + RLTR13D3 LTR ERVK 1 1099 -15 1 620 3233 86 5 78 chr15 4648205 4648772 -98846202 + RMER17A LTR ERVK 1 526 -225 1 620 5917 95 11 4 chr15 4648772 4649695 -98845279 - MusHAL1 LINE L1 -393 2319 1391 1 620 1433 117 58 0 chr15 4649693 4649933 -98845041 + Lx3A LINE L1 6130 6383 -598 1 620 438 287 114 24 chr15 4650065 4650274 -98844700 - MTE2b LTR MaLR 0 379 1 1 620 1480 200 44 39 chr15 4650349 4650755 -98844219 - RMER17C LTR ERVK -2 408 1 1 620 426 288 138 28 chr15 4650924 4651314 -98843660 + L1MEg LINE L1 1382 1814 -4428 1 620 819 309 57 40 chr15 4651839 4652315 -98842659 + RLTR12B LTR ERVK 39 522 -6 1 620 2695 203 18 29 chr15 4652334 4652887 -98842087 + RLTR1D LTR ERV1 59 605 0 1 620 369 320 102 57 chr15 4653069 4653423 -98841551 + L1MEg LINE L1 2864 3233 -2913 1 620 29 28 0 0 chr15 4653429 4653465 -98841509 + AT_rich Low_complexity Low_complexity 1 36 0 1 620 322 270 64 58 chr15 4653827 4654000 -98840974 + L1MC4 LINE L1 7506 7679 -363 1 620 434 238 36 58 chr15 4654111 4654249 -98840725 - RLTR23 LTR ERV1 0 430 296 1 620 746 97 9 0 chr15 4654919 4655032 -98839942 + (TTCC)n Simple_repeat Simple_repeat 3 116 0 1 620 13590 103 1 1 chr15 4655051 4657870 -98837104 - L1_Mus1 LINE L1 -2 6565 3746 1 620 31087 85 15 3 chr15 4657869 4663803 -98831171 - L1Md_F3 LINE L1 -14 6570 562 1 620 4831 89 7 24 chr15 4663814 4664524 -98830450 - L1_Mus4 LINE L1 0 6636 5939 1 620 212 179 0 0 chr15 4665120 4665159 -98829815 + A-rich Low_complexity Low_complexity 1 39 0 1 620 25 0 0 0 chr15 4665801 4665826 -98829148 + AT_rich Low_complexity Low_complexity 1 25 0 1 620 13866 173 50 29 chr15 4665931 4667587 -98827387 - MERVL_2A-int LTR ERVL -1552 4209 2537 1 620 414 100 0 0 chr15 4667587 4667647 -98827327 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 620 13866 173 49 28 chr15 4667647 4668696 -98826278 - MERVL_2A-int LTR ERVL -3225 2536 1449 1 620 2832 133 2 17 chr15 4668696 4669156 -98825818 - RLTR11B LTR ERVK 0 453 1 1 620 444 215 6 139 chr15 4669160 4669333 -98825641 - MYSERV-int LTR ERVK -1 6549 6400 1 620 647 235 56 17 chr15 4669333 4669560 -98825414 - MT2A LTR ERVL -118 483 95 1 620 600 221 57 82 chr15 4669536 4669694 -98825280 - MT2A LTR ERVL -379 154 1 1 620 372 107 34 51 chr15 4669918 4670036 -98824938 + T-rich Low_complexity Low_complexity 4 119 0 1 620 351 0 0 0 chr15 4670528 4670567 -98824407 + (TAA)n Simple_repeat Simple_repeat 1 39 0 1 620 220 113 57 0 chr15 4670710 4670763 -98824211 + T-rich Low_complexity Low_complexity 2 57 0 1 620 1003 230 143 42 chr15 4671384 4671720 -98823254 - ORR1D2 LTR MaLR 0 370 1 1 620 288 0 0 0 chr15 4671838 4671870 -98823104 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 620 6930 50 12 5 chr15 4672605 4673500 -98821474 + L1Md_F2 LINE L1 4685 5586 -297 1 620 7950 56 2 2 chr15 4673501 4674496 -98820478 + L1Md_F2 LINE L1 5588 6582 0 1 620 1330 345 53 18 chr15 4674527 4675189 -98819785 + Lx7 LINE L1 6572 7256 -440 1 620 5194 60 24 7 chr15 4675481 4676158 -98818816 + L1_Mus1 LINE L1 5880 6567 0 1 620 486 0 0 0 chr15 4677980 4678034 -98816940 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 620 362 326 7 52 chr15 4679583 4679600 -98815374 + ID SINE ID 69 78 -146 1 620 406 319 35 14 chr15 4679600 4679743 -98815231 + B1F SINE Alu 1 146 -3 1 620 572 246 47 23 chr15 4680428 4680598 -98814376 - Lx7 LINE L1 -23 7673 7526 1 620 228 67 0 0 chr15 4680598 4680628 -98814346 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1 620 572 245 36 21 chr15 4680628 4680675 -98814299 - Lx7 LINE L1 -171 7525 7479 1 620 1898 233 52 17 chr15 4680708 4681189 -98813785 - Lx7 LINE L1 -1211 6485 5988 1 620 333 325 75 20 chr15 4682042 4682243 -98812731 + MamRep434 DNA TcMar 174 385 -41 1 620 3042 163 69 42 chr15 4682312 4682977 -98811997 + RMER6C LTR ERVK 3 685 -5 1 620 244 292 55 18 chr15 4683420 4683526 -98811448 + MER45A DNA Tip100 52 165 -13 1 620 645 69 0 0 chr15 4683948 4684035 -98810939 + (TGG)n Simple_repeat Simple_repeat 3 89 0 1 620 203 394 21 11 chr15 4684520 4684615 -98810359 - MIRc SINE MIR -147 121 26 1 620 261 0 0 0 chr15 4684723 4684752 -98810222 + (A)n Simple_repeat Simple_repeat 1 29 0 1 620 334 285 83 38 chr15 4685617 4685774 -98809200 + RSINE1 SINE B4 2 165 0 1 620 309 286 25 49 chr15 4687072 4687153 -98807821 + RSINE1 SINE B4 47 125 -40 1 620 22 56 0 0 chr15 4687194 4687230 -98807744 + AT_rich Low_complexity Low_complexity 1 36 0 1 620 1428 306 90 2 chr15 4687751 4688274 -98806700 + Tigger7 DNA MER2_type 14 582 -1909 1 620 265 261 10 52 chr15 4689962 4690059 -98804915 + L1_Rod LINE L1 2813 2905 -2942 2 620 310 143 13 13 chr15 4690185 4690263 -98804711 + GA-rich Low_complexity Low_complexity 1 78 0 2 620 248 286 0 9 chr15 4690443 4690556 -98804418 + CT-rich Low_complexity Low_complexity 3 114 0 2 620 346 266 12 12 chr15 4691365 4691445 -98803529 + RSINE1 SINE B4 3 82 -83 2 620 220 309 0 81 chr15 4691553 4691627 -98803347 + RSINE1 SINE B4 86 153 -12 2 620 23 0 0 0 chr15 4691651 4691674 -98803300 + AT_rich Low_complexity Low_complexity 1 23 0 2 620 20685 161 73 2 chr15 4691678 4696337 -98798637 + L1Md_A LINE L1 631 5589 -297 2 620 8050 40 4 5 chr15 4696337 4697323 -98797651 + L1Md_F3 LINE L1 5587 6571 -13 2 620 251 301 120 2 chr15 4697470 4697586 -98797388 + MIR SINE MIR 13 141 -127 2 620 252 0 0 0 chr15 4697669 4697697 -98797277 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 2 620 188 86 29 0 chr15 4698342 4698377 -98796597 + (CAAAAA)n Simple_repeat Simple_repeat 6 41 0 2 620 1078 248 189 13 chr15 4698535 4698853 -98796121 - MTD LTR MaLR -39 380 7 2 620 6506 118 73 1 chr15 4699252 4700297 -98794677 - Lx2B LINE L1 -5 6995 5876 2 620 244 169 39 78 chr15 4700509 4700586 -98794388 - L1MB8 LINE L1 -56 6122 6049 2 620 405 0 0 0 chr15 4700731 4700776 -98794198 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 2 620 438 20 0 0 chr15 4700777 4700828 -98794146 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 620 368 305 59 121 chr15 4700901 4701140 -98793834 - B4 SINE B4 -63 229 6 2 620 625 264 45 40 chr15 4701183 4701492 -98793482 - L1M4 LINE L1 -717 5467 5156 2 620 653 286 39 24 chr15 4701505 4701713 -98793261 - B3 SINE B2 0 216 6 2 620 558 0 0 0 chr15 4701774 4701836 -98793138 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 620 373 262 110 24 chr15 4701902 4702066 -98792908 - L1M4 LINE L1 -1369 4777 4600 2 620 238 336 25 41 chr15 4702310 4702431 -98792543 - ORR1E LTR MaLR -238 121 3 2 620 435 269 67 25 chr15 4702431 4702671 -98792303 - L1M4 LINE L1 -1539 4607 4358 2 620 1192 275 117 22 chr15 4702717 4703488 -98791486 - L1MA5 LINE L1 -6 6297 5418 2 620 272 293 103 81 chr15 4705494 4705682 -98789292 - MIRb SINE MIR -53 215 22 2 620 1581 158 205 0 chr15 4706002 4706319 -98788655 + ORR1C2 LTR MaLR 3 384 0 2 620 465 329 7 59 chr15 4706477 4706629 -98788345 + RSINE1 SINE B4 18 161 -4 2 620 21 36 0 0 chr15 4707149 4707177 -98787797 + AT_rich Low_complexity Low_complexity 1 28 0 2 620 495 0 0 0 chr15 4707427 4707482 -98787492 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 620 1742 201 13 18 chr15 4707566 4707807 -98787167 - ORR1C1 LTR MaLR 0 378 133 2 620 234 0 0 0 chr15 4707807 4707833 -98787141 + (CAGCC)n Simple_repeat Simple_repeat 2 27 0 2 620 1742 201 13 18 chr15 4707833 4707971 -98787003 - ORR1C1 LTR MaLR -246 132 1 2 620 216 0 0 0 chr15 4708567 4708591 -98786383 + (GA)n Simple_repeat Simple_repeat 2 25 0 2 620 251 306 4 0 chr15 4708741 4708806 -98786168 + B3A SINE B2 22 87 -129 2 620 2001 226 14 62 chr15 4708806 4709379 -98785595 + RLTR31_Mur LTR ERVK 1 553 0 2 620 365 280 0 0 chr15 4709390 4709465 -98785509 + B3 SINE B2 133 207 -9 2 620 688 244 73 15 chr15 4710246 4710450 -98784524 - B3 SINE B2 0 216 1 2 620 22 0 0 0 chr15 4710556 4710578 -98784396 + AT_rich Low_complexity Low_complexity 1 22 0 2 620 524 319 41 32 chr15 4710733 4711001 -98783973 - Lx9 LINE L1 -299 7345 7049 2 620 484 290 68 68 chr15 4711027 4711175 -98783799 - RSINE1 SINE B4 -1 164 17 2 620 1303 24 6 34 chr15 4713652 4713867 -98781107 - L1Md_F3 LINE L1 0 6584 6401 2 620 6577 15 0 0 chr15 4713867 4714613 -98780361 + L1Md_F3 LINE L1 5621 6366 -218 2 620 22 56 0 0 chr15 4714710 4714746 -98780228 + AT_rich Low_complexity Low_complexity 1 36 0 2 620 28 29 0 0 chr15 4714839 4714874 -98780100 + AT_rich Low_complexity Low_complexity 1 35 0 2 620 195 150 33 16 chr15 4716188 4716249 -98778725 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 77 13783 105 22 4 chr15 4716327 4719091 -98775883 - L1_Mus1 LINE L1 -2 6565 3746 2 621 29499 26 1 0 chr15 4719091 4725964 -98769010 - L1Md_T LINE L1 0 6585 1 2 621 14121 113 5 1 chr15 4725965 4728231 -98766743 - L1_Mus1 LINE L1 -2124 3759 1484 2 621 1225 182 0 11 chr15 4728205 4728482 -98766492 + L1Md_A LINE L1 1014 1287 -5437 2 621 1365 80 19 0 chr15 4728475 4728688 -98766286 - L1Md_F LINE L1 -4394 1489 1273 2 621 1372 214 45 20 chr15 4728685 4729043 -98765931 - L1Md_F LINE L1 -6038 578 212 2 621 2004 44 44 0 chr15 4729599 4729850 -98765124 - L1Md_T LINE L1 0 6582 6321 2 621 1212 41 0 20 chr15 4732988 4733138 -98761836 - B1_Mus2 SINE Alu 0 147 1 2 621 283 360 0 35 chr15 4733401 4733516 -98761458 - PB1D10 SINE Alu 0 117 7 2 621 1294 274 85 31 chr15 4733800 4734448 -98760526 - Lx9 LINE L1 -27 7617 6935 2 621 303 28 0 0 chr15 4735326 4735362 -98759612 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 621 612 202 7 35 chr15 4735499 4735640 -98759334 + MTD LTR MaLR 1 120 -276 2 621 2795 48 75 3 chr15 4735856 4736229 -98758745 - MTB LTR MaLR 0 400 1 2 621 236 349 60 27 chr15 4736235 4736385 -98758589 - MamGypLTR2c LTR Gypsy -28 1040 886 2 621 207 100 0 0 chr15 4737830 4737860 -98757114 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2 621 255 389 6 63 chr15 4737937 4738096 -98756878 + MIR SINE MIR 43 192 -70 2 621 318 250 0 0 chr15 4738179 4738235 -98756739 + ID2 SINE ID 4 59 -24 2 621 1237 157 22 31 chr15 4738625 4738848 -98756126 - URR1B DNA MER1_type 0 225 5 2 621 209 333 179 0 chr15 4739125 4739248 -98755726 + MIRb SINE MIR 74 218 -50 2 621 252 0 0 0 chr15 4740835 4740863 -98754111 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 621 186 296 108 40 chr15 4740899 4740973 -98754001 + MIRm SINE MIR 19 97 -179 2 621 247 367 32 17 chr15 4741327 4741465 -98753509 + MIRb SINE MIR 47 188 -88 2 621 436 240 20 0 chr15 4741572 4741672 -98753302 - ORR1D2 LTR MaLR 0 374 273 2 621 866 249 0 16 chr15 4741683 4741867 -98753107 - ORR1D2 LTR MaLR -187 183 3 2 621 1862 161 82 0 chr15 4742066 4742407 -98752567 - ORR1C1 LTR MaLR -7 371 3 2 621 214 280 0 0 chr15 4743064 4743114 -98751860 + (TATG)n Simple_repeat Simple_repeat 2 51 0 2 621 22 35 0 0 chr15 4743863 4743892 -98751082 + AT_rich Low_complexity Low_complexity 1 29 0 2 621 182 267 77 39 chr15 4744085 4744163 -98750811 - MER5A DNA MER1_type -37 152 72 2 621 409 370 102 15 chr15 4744494 4744700 -98750274 + MER58A DNA MER1_type 1 224 0 2 621 24 32 0 0 chr15 4744790 4744821 -98750153 + AT_rich Low_complexity Low_complexity 1 31 0 2 621 800 228 0 0 chr15 4744960 4745109 -98749865 + B1_Mur1 SINE Alu 1 149 0 2 621 809 312 22 81 chr15 4745598 4745957 -98749017 - ORR1E LTR MaLR -21 338 1 2 621 363 23 0 0 chr15 4745991 4746035 -98748939 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 621 892 294 34 27 chr15 4746063 4746172 -98748802 - B4A SINE B4 0 292 185 2 621 495 0 0 0 chr15 4746172 4746227 -98748747 + (ACTAG)n Simple_repeat Simple_repeat 3 57 0 2 621 892 294 34 27 chr15 4746227 4746379 -98748595 - B4A SINE B4 -108 184 30 2 621 466 284 11 0 chr15 4746526 4746621 -98748353 - PB1D9 SINE Alu -20 100 5 2 621 198 103 0 0 chr15 4746721 4746750 -98748224 + (GGA)n Simple_repeat Simple_repeat 2 30 0 2 621 834 223 67 29 chr15 4747648 4747819 -98747155 + B3 SINE B2 1 179 -37 2 621 504 0 0 0 chr15 4747819 4747875 -98747099 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 621 834 231 44 84 chr15 4747875 4747935 -98747039 + B3 SINE B2 152 215 -1 2 621 28 29 0 0 chr15 4749056 4749091 -98745883 + AT_rich Low_complexity Low_complexity 1 35 0 2 621 686 247 118 76 chr15 4749485 4749748 -98745226 - B4A SINE B4 -16 276 3 2 621 200 216 0 0 chr15 4749884 4749921 -98745053 + CT-rich Low_complexity Low_complexity 1 37 0 2 621 246 128 0 0 chr15 4750479 4750518 -98744456 + (CATA)n Simple_repeat Simple_repeat 2 40 0 2 621 1175 57 0 0 chr15 4750596 4750737 -98744237 + B1_Mm SINE Alu 1 141 -6 2 621 180 0 0 0 chr15 4750737 4750757 -98744217 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 621 2949 61 200 9 chr15 4751351 4751781 -98743193 - RLTR1B LTR ERV1 0 512 1 2 621 474 125 0 0 chr15 4752626 4752706 -98742268 + (TTCC)n Simple_repeat Simple_repeat 4 83 0 2 621 2067 138 3 9 chr15 4753004 4753327 -98741647 - ORR1A4 LTR MaLR -8 321 1 2 621 243 79 0 0 chr15 4753342 4753380 -98741594 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 2 621 220 70 23 23 chr15 4753385 4753429 -98741545 + (TTTTTG)n Simple_repeat Simple_repeat 4 47 0 2 621 698 155 144 23 chr15 4753433 4753565 -98741409 - B1_Mur4 SINE Alu 0 150 3 2 621 242 293 51 17 chr15 4755418 4755536 -98739438 + L2b LINE L2 2974 3095 -280 2 621 279 133 93 0 chr15 4756297 4756372 -98738602 - Lx9 LINE L1 -1 7643 7562 2 621 458 186 41 12 chr15 4756588 4756936 -98738038 + (CA)n Simple_repeat Simple_repeat 1 358 0 2 621 1336 161 9 0 chr15 4758833 4759056 -98735918 + URR1B DNA MER1_type 1 225 0 2 621 452 285 36 7 chr15 4761057 4761195 -98733779 + B1F SINE Alu 1 142 -7 2 621 25 51 0 0 chr15 4761610 4761649 -98733325 + AT_rich Low_complexity Low_complexity 1 39 0 2 621 2180 267 50 59 chr15 4761733 4762465 -98732509 - Lx8 LINE L1 -2 7471 6742 2 621 999 114 0 0 chr15 4762465 4762817 -98732157 + (CA)n Simple_repeat Simple_repeat 1 352 0 2 621 297 0 0 0 chr15 4762817 4762849 -98732125 + (TC)n Simple_repeat Simple_repeat 1 33 0 2 621 288 0 0 0 chr15 4762849 4762880 -98732094 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 621 2180 267 50 59 chr15 4762880 4762994 -98731980 - Lx8 LINE L1 -732 6741 6630 2 621 219 157 0 0 chr15 4763958 4764009 -98730965 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 621 3280 116 6 8 chr15 4766152 4766648 -98728326 + RLTR1C LTR ERV1 1 495 -8 2 621 367 175 25 0 chr15 4768732 4768812 -98726162 + L1M5 LINE L1 5679 5760 -364 2 621 506 285 9 26 chr15 4768953 4769098 -98725876 + PB1D10 SINE Alu 12 147 -2 3 621 207 0 0 0 chr15 4769140 4769163 -98725811 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 621 1088 95 0 0 chr15 4769580 4769727 -98725247 + B1_Mus2 SINE Alu 1 147 0 3 621 29 28 0 0 chr15 4769731 4769767 -98725207 + AT_rich Low_complexity Low_complexity 1 36 0 3 621 253 68 0 0 chr15 4769804 4769848 -98725126 + Lx4A LINE L1 5242 5285 -592 3 621 8888 116 28 15 chr15 4770173 4771918 -98723056 + Lx4A LINE L1 5283 7057 -1 3 621 637 315 122 11 chr15 4771950 4772213 -98722761 + B4A SINE B4 1 292 0 3 621 198 0 0 0 chr15 4772356 4772378 -98722596 + (GAA)n Simple_repeat Simple_repeat 2 23 0 3 621 359 127 16 0 chr15 4773808 4773871 -98721103 + (TAA)n Simple_repeat Simple_repeat 2 65 0 3 621 681 395 97 0 chr15 4773871 4774261 -98720713 + MLT1G LTR MaLR 155 582 -9 3 621 35 24 0 0 chr15 4774382 4774424 -98720550 + AT_rich Low_complexity Low_complexity 1 42 0 3 621 591 85 0 0 chr15 4774460 4774542 -98720432 + (CAGG)n Simple_repeat Simple_repeat 2 83 0 3 621 2748 215 57 69 chr15 4774997 4775807 -98719167 + Lx7 LINE L1 6897 7696 0 3 621 336 324 106 21 chr15 4776335 4776477 -98718497 - MLT1D LTR MaLR -7 498 345 3 621 447 266 165 0 chr15 4776535 4776575 -98718399 - MLT1D LTR MaLR -264 241 194 3 621 195 42 0 0 chr15 4776575 4776599 -98718375 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 621 447 266 165 0 chr15 4776599 4776746 -98718228 - MLT1D LTR MaLR -312 193 24 3 621 558 43 0 0 chr15 4777488 4777557 -98717417 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 621 25 51 0 0 chr15 4777652 4777691 -98717283 + AT_rich Low_complexity Low_complexity 1 39 0 3 621 858 239 17 22 chr15 4778043 4778223 -98716751 + B3A SINE B2 2 180 -18 3 621 493 28 28 0 chr15 4778552 4778623 -98716351 + (TCTA)n Simple_repeat Simple_repeat 1 73 0 3 621 236 200 0 16 chr15 4778924 4778985 -98715989 + CT-rich Low_complexity Low_complexity 3 62 0 3 621 32 43 0 0 chr15 4780161 4780207 -98714767 + AT_rich Low_complexity Low_complexity 1 46 0 3 621 701 237 6 31 chr15 4780932 4781093 -98713881 + MTE2b LTR MaLR 3 159 -220 3 621 324 250 24 24 chr15 4781092 4781174 -98713800 + MTE2b LTR MaLR 95 176 -203 3 621 594 274 143 10 chr15 4781156 4781359 -98713615 + MTEa LTR MaLR 96 325 -54 3 621 566 222 176 51 chr15 4781452 4781708 -98713266 + L1MC LINE L1 5360 5647 -686 3 621 1391 264 67 8 chr15 4783327 4783698 -98711276 - Lx6 LINE L1 0 7460 7068 3 621 188 34 0 33 chr15 4783706 4783736 -98711238 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 3 621 955 173 94 6 chr15 4783737 4783917 -98711057 + Lx6 LINE L1 6760 6955 -505 3 621 509 289 43 63 chr15 4784355 4784515 -98710459 + B4A SINE B4 14 169 -123 3 621 1764 120 11 4 chr15 4784515 4784782 -98710192 + RLTR9A LTR ERVK 1 269 -99 3 621 2870 18 74 20 chr15 4784782 4784958 -98710016 + IAPLTR2a LTR ERVK 1 177 -234 3 621 2007 109 28 19 chr15 4784958 4785277 -98709697 + RLTRETN_Mm LTR ERVK 1 322 0 3 621 2870 18 74 20 chr15 4785277 4785490 -98709484 + IAPLTR2a LTR ERVK 178 411 0 3 621 784 76 0 0 chr15 4785490 4785595 -98709379 + RLTR9A LTR ERVK 264 368 0 3 621 329 275 0 24 chr15 4786417 4786499 -98708475 - RMER15 LTR ERVL -32 543 464 3 621 540 192 155 22 chr15 4786911 4787092 -98707882 + Lx6 LINE L1 6020 6224 -1236 3 621 1276 324 18 108 chr15 4787212 4787479 -98707495 + Lx5 LINE L1 6266 6476 -582 3 621 464 0 18 0 chr15 4787479 4787535 -98707439 + (TAAA)n Simple_repeat Simple_repeat 3 59 0 3 621 1658 316 67 26 chr15 4787535 4788141 -98706833 + Lx5 LINE L1 6456 7459 -1 3 621 245 51 0 25 chr15 4788155 4788195 -98706779 + (CAGAGA)n Simple_repeat Simple_repeat 4 42 0 3 621 489 299 112 46 chr15 4788359 4788685 -98706289 - RMER15 LTR ERVL -138 437 1 3 621 274 358 25 0 chr15 4788892 4788973 -98706001 + MLT1H2 LTR MaLR 71 153 -336 3 621 198 0 0 0 chr15 4789139 4789161 -98705813 + (A)n Simple_repeat Simple_repeat 1 22 0 3 621 887 262 87 62 chr15 4789183 4789472 -98705502 + RMER21B LTR ERV1 269 564 -278 3 621 499 195 12 0 chr15 4789824 4789906 -98705068 + ID4 SINE ID 1 83 0 3 621 235 130 18 18 chr15 4789907 4789962 -98705012 + GA-rich Low_complexity Low_complexity 2 56 0 3 621 23 54 0 0 chr15 4789965 4790002 -98704972 + AT_rich Low_complexity Low_complexity 1 37 0 3 621 270 0 0 0 chr15 4790205 4790235 -98704739 + (T)n Simple_repeat Simple_repeat 1 30 0 3 621 709 291 36 83 chr15 4791093 4791453 -98703521 - L1M3e LINE L1 -1801 5302 4960 3 621 454 380 50 50 chr15 4791806 4791944 -98703030 - L1M3e LINE L1 -6648 382 247 3 621 704 52 21 0 chr15 4791944 4792040 -98702934 + (GAAA)n Simple_repeat Simple_repeat 3 100 0 3 621 454 380 50 50 chr15 4792040 4792283 -98702691 - L1M3e LINE L1 -6784 246 1 3 621 1541 92 0 0 chr15 4792457 4792653 -98702321 - L1_Mus1 LINE L1 0 6567 6372 3 621 17468 80 14 4 chr15 4792654 4795014 -98699960 + L1Md_F2 LINE L1 3203 5586 -297 3 621 7731 82 7 6 chr15 4795014 4796009 -98698965 + L1Md_F2 LINE L1 5587 6582 0 3 621 180 0 0 0 chr15 4796094 4796114 -98698860 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 3 621 648 203 19 7 chr15 4796115 4796269 -98698705 - L1_Mur2 LINE L1 -2030 3847 3692 3 621 21 57 0 0 chr15 4796863 4796898 -98698076 + AT_rich Low_complexity Low_complexity 1 35 0 3 621 553 299 127 26 chr15 4796992 4797152 -98697822 + B3A SINE B2 1 180 -36 3 621 294 73 0 0 chr15 4797152 4797193 -98697781 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 621 436 299 127 26 chr15 4797193 4797221 -98697753 + B3 SINE B2 181 208 -8 3 621 338 307 80 33 chr15 4798138 4798350 -98696624 + L1MC5 LINE L1 7726 7947 -14 3 621 4750 57 11 3 chr15 4798645 4799213 -98695761 + L1_Mus1 LINE L1 5996 6567 0 3 621 24 0 0 0 chr15 4799223 4799247 -98695727 + AT_rich Low_complexity Low_complexity 1 24 0 3 621 226 309 82 0 chr15 4799637 4799747 -98695227 + L1M5 LINE L1 4078 4196 -1950 3 621 302 318 68 0 chr15 4799765 4799853 -98695121 + RSINE1 SINE B4 3 96 -69 3 621 2288 156 22 65 chr15 4799855 4800301 -98694673 - RMER4A LTR ERVK 0 466 40 3 621 225 0 0 0 chr15 4800301 4800326 -98694648 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 621 1759 116 27 8 chr15 4800622 4800883 -98694091 - Lx LINE L1 -7 6647 6382 3 621 33 0 0 0 chr15 4801067 4801100 -98693874 + AT_rich Low_complexity Low_complexity 1 33 0 3 621 1704 118 3 70 chr15 4801486 4801770 -98693204 - L1Md_F2 LINE L1 0 6582 6318 3 621 360 225 0 0 chr15 4801803 4801874 -98693100 + RSINE1 SINE B4 93 163 -2 3 621 417 245 82 0 chr15 4801937 4802035 -98692939 + B1F1 SINE Alu 7 112 -37 3 621 3225 19 0 73 chr15 4802040 4802436 -98692538 - IAPLTR1_Mm LTR ERVK 0 367 1 3 621 56329 23 17 3 chr15 4802436 4808821 -98686153 - IAPEz-int LTR ERVK 0 6481 8 3 621 3225 19 0 73 chr15 4808821 4809217 -98685757 - IAPLTR1_Mm LTR ERVK 0 367 1 3 621 17151 16 0 14 chr15 4809393 4812160 -98682814 + L1Md_A LINE L1 440 3162 -2721 3 621 17101 18 0 14 chr15 4812161 4814945 -98680029 + L1Md_A LINE L1 423 3162 -2721 3 621 39024 13 2 7 chr15 4814946 4820351 -98674623 + L1Md_A LINE L1 215 5586 -297 3 621 9505 9 0 0 chr15 4820351 4821347 -98673627 + L1Md_A LINE L1 5587 6582 0 3 621 428 299 122 58 chr15 4821391 4821753 -98673221 + L1M5 LINE L1 4413 4797 -1349 3 621 805 281 24 24 chr15 4821835 4822127 -98672847 - Lx6 LINE L1 -1292 6168 5877 3 621 1510 288 83 37 chr15 4822143 4822940 -98672034 + Lx6 LINE L1 6455 7433 -27 3 621 1211 91 3 11 chr15 4822942 4823308 -98671666 + (GAAA)n Simple_repeat Simple_repeat 1 362 0 3 621 619 284 24 39 chr15 4823363 4823568 -98671406 + Lx5 LINE L1 6848 7049 -1 3 621 244 239 40 40 chr15 4823612 4823686 -98671288 + L1M5 LINE L1 4872 4945 -1201 3 621 472 315 76 35 chr15 4823691 4824050 -98670924 + L1M5 LINE L1 5395 5777 -402 3 621 234 0 0 0 chr15 4824140 4824166 -98670808 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 3 621 7165 146 28 17 chr15 4824768 4825951 -98669023 + Lx LINE L1 5204 6120 -534 3 621 1052 182 96 99 chr15 4825951 4826186 -98668788 + RLTRETN_Mm LTR ERVK 1 223 -99 3 621 708 12 0 0 chr15 4826186 4826267 -98668707 + (TC)n Simple_repeat Simple_repeat 1 81 0 3 621 1052 182 96 99 chr15 4826267 4826354 -98668620 + RLTRETN_Mm LTR ERVK 224 321 -1 3 621 7165 103 20 17 chr15 4826354 4826891 -98668083 + Lx LINE L1 6121 6648 -6 3 621 16560 175 25 141 chr15 4826898 4827159 -98667815 + L1_Mur2 LINE L1 1254 1516 -4361 3 621 3615 35 2 0 chr15 4827159 4827554 -98667420 + MTA_Mm LTR MaLR 1 396 0 3 621 9093 48 16 10 chr15 4827554 4828646 -98666328 + MTA_Mm-int LTR MaLR 1 1098 0 3 621 3201 46 62 0 chr15 4828646 4829019 -98665955 + MTA_Mm LTR MaLR 1 396 0 3 621 16560 175 25 141 chr15 4829019 4830135 -98664839 + L1_Mur2 LINE L1 1517 2551 -3326 3 621 494 302 114 77 chr15 4830135 4830626 -98664348 - RLTR11A2 LTR ERVK -18 509 1 3 621 16560 175 25 141 chr15 4830626 4830717 -98664257 + L1_Mur2 LINE L1 2552 2637 -3240 3 621 660 48 0 0 chr15 4830717 4830801 -98664173 + (TG)n Simple_repeat Simple_repeat 1 84 0 3 621 16560 175 25 141 chr15 4830801 4833401 -98661573 + L1_Mur2 LINE L1 2638 5282 -595 3 621 7376 81 2 2 chr15 4833401 4835045 -98659929 - L1Md_F2 LINE L1 -3 6579 4936 3 621 15506 156 14 57 chr15 4836326 4836977 -98657997 - L1_Mm LINE L1 -949 4937 4290 3 621 3846 112 26 4 chr15 4836977 4837513 -98657461 - L1Md_F2 LINE L1 -3 6579 6032 3 621 16504 80 12 5 chr15 4837513 4839873 -98655101 - L1_Mm LINE L1 -1579 4304 2057 3 621 3178 249 24 37 chr15 4839852 4840837 -98654137 + Lx5 LINE L1 5664 6852 -608 3 621 252 182 18 35 chr15 4841875 4841932 -98653042 - Lx7 LINE L1 -767 6929 6874 3 621 402 242 10 21 chr15 4841951 4842048 -98652926 + Lx7 LINE L1 7088 7183 -513 3 621 230 300 54 22 chr15 4842048 4842140 -98652834 + RLTR13A2 LTR ERVK 422 516 -442 3 621 2220 159 55 20 chr15 4842428 4842827 -98652147 - MTC LTR MaLR -8 413 1 3 621 691 35 0 0 chr15 4842850 4842935 -98652039 + L1Md_T LINE L1 6498 6582 0 3 621 1296 92 40 6 chr15 4843071 4843246 -98651728 - B2_Mm2 SINE B2 -14 181 1 3 621 630 164 24 251 chr15 4843261 4843472 -98651502 + RMER19B LTR ERVK 1 163 -739 3 621 2438 30 1 0 chr15 4843483 4843769 -98651205 + L1Md_T LINE L1 5309 5586 -297 3 621 9100 29 0 0 chr15 4843769 4844765 -98650209 + L1Md_T LINE L1 5587 6582 0 3 621 532 246 57 23 chr15 4846009 4846184 -98648790 - Lx9 LINE L1 0 7644 7464 3 621 328 209 9 87 chr15 4846247 4846313 -98648661 - Lx9 LINE L1 -129 7515 7459 3 621 333 0 0 0 chr15 4846313 4846350 -98648624 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 621 328 209 9 87 chr15 4846350 4846398 -98648576 - Lx9 LINE L1 -186 7458 7411 3 621 203 279 16 16 chr15 4846664 4846726 -98648248 - MER5A DNA MER1_type -83 106 45 3 621 642 296 51 18 chr15 4846821 4847155 -98647819 + L1MA4 LINE L1 4978 5322 -821 3 621 973 275 93 14 chr15 4847136 4847442 -98647532 + L1MA4 LINE L1 5451 5787 -513 3 621 462 36 0 0 chr15 4847442 4847498 -98647476 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 621 973 275 93 14 chr15 4847498 4847634 -98647340 + L1MA4 LINE L1 5788 5928 -372 3 621 189 0 0 0 chr15 4847654 4847675 -98647299 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 3 621 2272 175 93 38 chr15 4847675 4848179 -98646795 - Lx4B LINE L1 -21 7037 6506 3 621 21 0 0 0 chr15 4849340 4849361 -98645613 + AT_rich Low_complexity Low_complexity 1 21 0 3 622 252 86 0 0 chr15 4849674 4849709 -98645265 + (TGG)n Simple_repeat Simple_repeat 1 35 0 4 622 544 213 24 12 chr15 4849729 4849985 -98644989 + (TGG)n Simple_repeat Simple_repeat 1 259 0 4 622 544 97 11 11 chr15 4850588 4850682 -98644292 + (TCC)n Simple_repeat Simple_repeat 3 96 0 4 622 194 358 77 32 chr15 4851011 4851167 -98643807 - MIRb SINE MIR -8 260 98 4 622 635 278 19 85 chr15 4851620 4851832 -98643142 + B3A SINE B2 1 198 0 4 622 600 214 17 0 chr15 4851855 4851972 -98643002 + B1_Mur2 SINE Alu 10 128 -21 4 622 181 321 125 0 chr15 4853277 4853333 -98641641 + L4 LINE RTE 1377 1439 -590 4 622 428 291 0 10 chr15 4853800 4853904 -98641070 + PB1D10 SINE Alu 10 112 -5 4 622 342 67 0 0 chr15 4854065 4854110 -98640864 + (CCCCCA)n Simple_repeat Simple_repeat 3 47 0 4 622 188 257 0 14 chr15 4855779 4855850 -98639124 + (CA)n Simple_repeat Simple_repeat 2 71 0 4 622 1847 216 104 39 chr15 4857167 4857649 -98637325 - RMER15 LTR ERVL -36 539 27 4 622 457 324 69 91 chr15 4857961 4858236 -98636738 + B4A SINE B4 22 290 -2 4 622 219 69 0 0 chr15 4858335 4858364 -98636610 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 622 202 337 10 10 chr15 4859665 4859764 -98635210 + T-rich Low_complexity Low_complexity 5 103 0 4 622 8205 115 23 1 chr15 4859920 4860023 -98634951 - Lx2 LINE L1 -14 6983 6868 4 622 198 0 0 0 chr15 4860023 4860045 -98634929 + (CCCA)n Simple_repeat Simple_repeat 4 25 0 4 622 8205 115 23 1 chr15 4860045 4861085 -98633889 - Lx2 LINE L1 -130 6867 5815 4 622 689 321 16 0 chr15 4861085 4861278 -98633696 - B3 SINE B2 -19 197 2 4 622 648 247 18 48 chr15 4863124 4863290 -98631684 + RSINE1 SINE B4 5 165 0 4 622 1187 217 171 3 chr15 4863314 4863670 -98631304 + Lx9 LINE L1 7222 7637 -7 4 622 228 233 32 48 chr15 4864491 4864554 -98630420 - MLT1A0 LTR MaLR 0 365 304 4 622 288 287 101 40 chr15 4864626 4864775 -98630199 - MLT1A0 LTR MaLR -207 158 1 4 622 1140 187 90 16 chr15 4865304 4865549 -98629425 - Lx5 LINE L1 -1 7049 6787 4 622 740 85 23 23 chr15 4867925 4868057 -98626917 + (GGAA)n Simple_repeat Simple_repeat 3 134 0 4 622 362 309 65 9 chr15 4868658 4868766 -98626208 + ID_B1 SINE B4 88 201 -23 4 622 493 306 20 34 chr15 4868774 4868923 -98626051 + RSINE1 SINE B4 2 148 -17 4 622 189 0 0 0 chr15 4869931 4869952 -98625022 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 4 622 459 318 15 15 chr15 4870025 4870159 -98624815 + RSINE1 SINE B4 4 137 -28 4 622 257 293 35 86 chr15 4870769 4870967 -98624007 + RMER17A2 LTR ERVK 230 417 -489 4 622 434 165 80 34 chr15 4872295 4872383 -98622591 + B1_Mur3 SINE Alu 45 136 -13 4 622 434 280 0 11 chr15 4872571 4872665 -98622309 - B1F SINE Alu -54 95 3 4 622 645 285 139 40 chr15 4873048 4873351 -98621623 + Lx8 LINE L1 7134 7466 -7 4 622 263 273 0 0 chr15 4874427 4874493 -98620481 + L1MA6 LINE L1 6235 6300 0 4 622 256 333 71 44 chr15 4874851 4874964 -98620010 + L2b LINE L2 3258 3373 -2 4 622 184 301 62 41 chr15 4876168 4876265 -98618709 + L2a LINE L2 2943 3041 -385 4 622 308 215 0 37 chr15 4876615 4876697 -98618277 - ORR1E LTR MaLR -13 366 288 4 622 348 303 48 16 chr15 4876793 4876917 -98618057 - ORR1E LTR MaLR -231 128 1 4 622 22 0 0 0 chr15 4877689 4877711 -98617263 + AT_rich Low_complexity Low_complexity 1 22 0 4 622 21 0 0 0 chr15 4877890 4877911 -98617063 + AT_rich Low_complexity Low_complexity 1 21 0 4 622 2406 288 57 3 chr15 4878022 4878894 -98616080 + L1MA9 LINE L1 3710 4628 -1512 4 622 1176 89 0 6 chr15 4878900 4879058 -98615916 + ORR1A2 LTR MaLR 1 157 -170 4 622 636 239 86 24 chr15 4879261 4879471 -98615503 - L1MA4 LINE L1 -379 5921 5699 4 622 255 279 0 0 chr15 4879538 4879606 -98615368 + PB1D10 SINE Alu 49 116 -1 4 622 302 340 164 11 chr15 4879724 4879992 -98614982 - Tigger9b DNA MER2_type -315 309 1 4 622 835 10 19 0 chr15 4880266 4880370 -98614604 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 4 622 540 177 17 17 chr15 4881417 4881595 -98613379 + (TG)n Simple_repeat Simple_repeat 2 179 0 4 622 501 252 21 57 chr15 4881597 4881786 -98613188 - B4A SINE B4 0 292 121 4 622 228 35 0 0 chr15 4882052 4882081 -98612893 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 4 622 1131 315 59 24 chr15 4882091 4882740 -98612234 + L1MA9 LINE L1 5380 6076 -236 4 622 37 69 0 0 chr15 4882882 4882954 -98612020 + AT_rich Low_complexity Low_complexity 1 72 0 4 622 621 272 11 32 chr15 4882997 4883183 -98611791 - L1M4 LINE L1 -1242 4904 4723 4 622 338 94 39 59 chr15 4883962 4884064 -98610910 + GA-rich Low_complexity Low_complexity 2 101 0 4 622 256 241 0 0 chr15 4885421 4885475 -98609499 - B1_Mus1 SINE Alu -85 63 10 4 622 813 190 73 0 chr15 4885481 4885618 -98609356 - B1_Mur1 SINE Alu -2 147 1 4 622 24 32 0 0 chr15 4885618 4885649 -98609325 + AT_rich Low_complexity Low_complexity 1 31 0 4 622 475 220 46 0 chr15 4885784 4885893 -98609081 + Lx6 LINE L1 7208 7321 -139 4 622 237 33 0 0 chr15 4885899 4885929 -98609045 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 622 910 239 20 10 chr15 4886206 4886405 -98608569 + B3 SINE B2 15 215 -1 4 622 655 293 43 16 chr15 4886556 4886740 -98608234 + B4A SINE B4 2 190 -102 4 622 309 244 17 0 chr15 4886814 4886990 -98607984 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 622 591 179 0 16 chr15 4887053 4887235 -98607739 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 622 449 268 0 89 chr15 4887608 4887743 -98607231 - B1_Mur2 SINE Alu -19 130 8 4 622 298 291 34 25 chr15 4888007 4888139 -98606835 + MIRb SINE MIR 34 166 -96 4 622 1786 46 0 55 chr15 4888764 4889019 -98605955 - MT2C_Mm LTR ERVL 0 475 235 4 622 3020 23 3 0 chr15 4889019 4889365 -98605609 + MERVL-int LTR ERVL 5025 5371 -114 4 622 329 125 26 53 chr15 4889365 4889441 -98605533 + ORR1A3-int LTR MaLR 567 640 -1323 4 622 321 0 0 0 chr15 4889441 4889479 -98605495 + MERVL-int LTR ERVL 5448 5485 0 4 622 487 47 52 0 chr15 4889479 4889570 -98605404 + MT2C_Mm LTR ERVL 1 100 -393 4 622 683 187 4 26 chr15 4889570 4889802 -98605172 + GA-rich Low_complexity Low_complexity 1 227 0 4 622 1021 131 6 6 chr15 4889806 4889812 -98605162 + (GA)n Simple_repeat Simple_repeat 2 7 0 4 622 1153 91 11 6 chr15 4889812 4889989 -98604985 + (GAGAA)n Simple_repeat Simple_repeat 3 180 0 4 622 1021 131 6 6 chr15 4889989 4890159 -98604815 + (GA)n Simple_repeat Simple_repeat 2 172 0 4 622 206 295 0 11 chr15 4890167 4890256 -98604718 + GA-rich Low_complexity Low_complexity 4 91 0 4 622 204 40 0 0 chr15 4890730 4890755 -98604219 + (A)n Simple_repeat Simple_repeat 1 25 0 4 622 189 171 0 0 chr15 4891905 4891940 -98603034 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 622 957 120 0 12 chr15 4892298 4892458 -98602516 + L1Md_F2 LINE L1 6419 6576 -6 4 622 223 174 0 0 chr15 4892637 4892683 -98602291 + T-rich Low_complexity Low_complexity 1 46 0 4 622 25 0 0 0 chr15 4892942 4892967 -98602007 + AT_rich Low_complexity Low_complexity 1 25 0 4 622 234 175 144 111 chr15 4893761 4893851 -98601123 + L5 LINE RTE 106 198 -2067 4 622 23 0 0 0 chr15 4895582 4895605 -98599369 + AT_rich Low_complexity Low_complexity 1 23 0 4 622 333 0 0 0 chr15 4895652 4895689 -98599285 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 622 459 0 0 0 chr15 4895689 4895739 -98599235 + (AAATG)n Simple_repeat Simple_repeat 3 53 0 4 622 3677 41 2 0 chr15 4895740 4896179 -98598795 + L1Md_F2 LINE L1 6143 6582 0 4 622 183 42 0 0 chr15 4896179 4896203 -98598771 + (AAATG)n Simple_repeat Simple_repeat 3 26 0 4 622 832 158 13 27 chr15 4896278 4896428 -98598546 - B1_Mus1 SINE Alu 0 148 1 4 622 202 217 36 36 chr15 4896474 4896584 -98598390 + (AATTG)n Simple_repeat Simple_repeat 1 110 0 4 622 464 289 67 93 chr15 4896619 4896844 -98598130 - Kanga1 DNA Tc2 -1430 315 97 4 622 856 171 162 25 chr15 4897662 4897860 -98597114 - URR1B DNA MER1_type 0 225 1 4 622 317 137 180 23 chr15 4899586 4899695 -98595279 - B2_Mm2 SINE B2 -5 188 47 4 622 671 126 94 0 chr15 4899742 4899869 -98595105 - B2_Mm1t SINE B2 -14 179 41 4 622 180 0 0 0 chr15 4900240 4900260 -98594714 + (A)n Simple_repeat Simple_repeat 1 20 0 4 622 1884 164 47 0 chr15 4900310 4900652 -98594322 - RLTR15 LTR ERVK 0 359 2 4 622 269 68 23 0 chr15 4902902 4902946 -98592028 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 4 622 285 209 0 0 chr15 4903570 4903637 -98591337 + CT-rich Low_complexity Low_complexity 2 68 0 4 622 7816 96 7 2 chr15 4903643 4904959 -98590015 - L1_Mus4 LINE L1 0 6636 5314 4 622 8895 88 3 0 chr15 4904958 4906291 -98588683 - L1VL4 LINE L1 -1469 2090 753 4 622 22869 64 2 5 chr15 4906284 4909970 -98585004 - L1Md_F2 LINE L1 0 6582 2909 4 622 6745 70 1 57 chr15 4909980 4911004 -98583970 - L1Md_F2 LINE L1 -5380 1344 366 4 622 4704 166 7 5 chr15 4911005 4911782 -98583192 - L1VL4 LINE L1 -5535 767 1 4 622 264 268 0 0 chr15 4911782 4911838 -98583136 + polypyrimidine Low_complexity Low_complexity 3 58 0 4 622 1284 87 22 0 chr15 4912282 4912465 -98582509 + B2_Mm1a SINE B2 2 188 -5 4 622 392 200 9 0 chr15 4912946 4913051 -98581923 + (TA)n Simple_repeat Simple_repeat 1 106 0 4 622 393 306 16 24 chr15 4913413 4913537 -98581437 + MLT1F LTR MaLR 7 129 -419 4 622 357 341 22 7 chr15 4913541 4913680 -98581294 - ID_B1 SINE B4 -2 222 82 4 622 509 274 102 31 chr15 4913842 4914038 -98580936 - Lx8 LINE L1 -25 7448 7239 4 622 7154 62 4 21 chr15 4914034 4914322 -98580652 - L1_Mus2 LINE L1 0 6566 6281 4 622 3027 32 0 0 chr15 4914322 4914668 -98580306 + ORR1A0 LTR MaLR 1 346 0 4 622 13837 60 12 1 chr15 4914668 4916439 -98578535 + ORR1A0-int LTR MaLR 1 1792 0 4 622 3024 32 0 0 chr15 4916439 4916785 -98578189 + ORR1A0 LTR MaLR 1 346 0 4 622 7154 62 4 21 chr15 4916785 4917429 -98577545 - L1_Mus2 LINE L1 -286 6280 5650 4 622 897 276 26 22 chr15 4917409 4917639 -98577335 - Lx8 LINE L1 -200 7273 7043 4 622 457 261 72 7 chr15 4917671 4917810 -98577164 + MLT1F1 LTR MaLR 417 564 -5 4 622 412 285 65 13 chr15 4918032 4918185 -98576789 + MER3 DNA MER1_type 2 162 -47 4 622 250 357 93 0 chr15 4918272 4918401 -98576573 + ID_B1 SINE B4 82 222 -2 5 622 270 136 0 0 chr15 4918403 4918447 -98576527 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 5 622 270 81 0 0 chr15 4919423 4919460 -98575514 + (T)n Simple_repeat Simple_repeat 1 37 0 5 622 906 65 0 0 chr15 4919478 4919601 -98575373 - L1_Mus2 LINE L1 0 6566 6444 5 622 252 0 0 0 chr15 4919724 4919752 -98575222 + (GA)n Simple_repeat Simple_repeat 1 28 0 5 622 1582 281 69 21 chr15 4920427 4921049 -98573925 + L1MA6 LINE L1 5412 6063 -237 5 622 1159 275 25 71 chr15 4921429 4921821 -98573153 + MTE2b LTR MaLR 1 374 -5 5 622 364 343 116 17 chr15 4921826 4922007 -98572967 + ERVL-B4-int LTR ERVL 775 973 -4741 5 622 1277 153 0 40 chr15 4922132 4922357 -98572617 - URR1B DNA MER1_type -3 222 7 5 622 261 211 0 0 chr15 4922471 4922528 -98572446 + ERVL-B4-int LTR ERVL 1243 1299 -4415 5 622 383 249 211 36 chr15 4922670 4922915 -98572059 + ERVL-B4-int LTR ERVL 1510 1752 -3962 5 622 2208 279 82 24 chr15 4922955 4923677 -98571297 + ERVL-B4-int LTR ERVL 1874 2637 -3077 5 622 778 269 45 42 chr15 4923730 4924017 -98570957 + ERVL-B4-int LTR ERVL 4998 5285 -429 5 622 1037 185 93 0 chr15 4924037 4924242 -98570732 + URR1B DNA MER1_type 1 224 -1 5 622 315 0 0 0 chr15 4924382 4924417 -98570557 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 622 1106 219 214 22 chr15 4924557 4924958 -98570016 + RCHARR1 DNA MER1_type 35 514 -460 5 622 1183 62 0 0 chr15 4924980 4925126 -98569848 + B1_Mus2 SINE Alu 2 147 0 5 622 198 128 0 0 chr15 4925126 4925165 -98569809 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 5 622 1152 219 32 83 chr15 4925171 4925454 -98569520 + RCHARR1 DNA MER1_type 518 787 -187 5 622 405 322 188 32 chr15 4925454 4925704 -98569270 - B4 SINE B4 -1 291 3 5 622 1152 219 32 83 chr15 4925704 4925794 -98569180 + RCHARR1 DNA MER1_type 788 872 -102 5 622 1694 155 58 12 chr15 4925894 4926221 -98568753 - ORR1B1 LTR MaLR -8 386 45 5 622 590 162 8 0 chr15 4927619 4927736 -98567238 + CT-rich Low_complexity Low_complexity 1 118 0 5 622 517 53 40 0 chr15 4929648 4929724 -98565250 + L1Md_F2 LINE L1 6502 6580 -2 5 622 22 0 0 0 chr15 4929764 4929786 -98565188 + AT_rich Low_complexity Low_complexity 1 22 0 5 622 3664 44 5 2 chr15 4930387 4930822 -98564152 - RLTR10C LTR ERVK 0 436 1 5 622 39312 17 24 11 chr15 4930822 4935855 -98559119 - MMERVK10C-int LTR ERVK 0 7581 1885 5 622 331 155 17 0 chr15 4935862 4935920 -98559054 - MMERVK10C-int LTR ERVK -5627 1779 1721 5 622 663 248 153 72 chr15 4935904 4936290 -98558684 - MMERVK10C-int LTR ERVK -4819 2425 2079 5 622 481 133 0 43 chr15 4936380 4936474 -98558500 - MMERVK10C-int LTR ERVK -6629 952 863 5 622 773 200 5 10 chr15 4936479 4936671 -98558303 - MMERVK10C-int LTR ERVK -6662 919 729 5 622 2824 61 0 0 chr15 4936669 4937012 -98557962 - MMERVK10C-int LTR ERVK -7238 343 1 5 622 3664 44 5 2 chr15 4937012 4937447 -98557527 - RLTR10C LTR ERVK 0 436 1 5 622 471 35 0 0 chr15 4938278 4938335 -98556639 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 622 386 248 72 0 chr15 4939842 4939967 -98555007 + MER113 DNA MER1_type 111 244 -277 5 622 230 208 0 19 chr15 4940092 4940146 -98554828 - B3 SINE B2 -2 214 162 5 622 800 230 58 16 chr15 4940914 4940940 -98554034 - B3A SINE B2 0 198 175 5 622 489 121 0 0 chr15 4940940 4941023 -98553951 + (TG)n Simple_repeat Simple_repeat 2 84 0 5 622 800 230 58 16 chr15 4941023 4941186 -98553788 - B3A SINE B2 -24 174 1 5 622 545 329 0 0 chr15 4941216 4941353 -98553621 + RSINE1 SINE B4 5 141 -24 5 622 21 89 0 0 chr15 4941458 4941514 -98553460 + AT_rich Low_complexity Low_complexity 1 56 0 5 622 416 237 76 34 chr15 4941537 4941655 -98553319 + ID_B1 SINE B4 93 215 -9 5 622 796 180 7 7 chr15 4941803 4941943 -98553031 - B1_Mur4 SINE Alu -9 141 2 5 622 239 244 0 13 chr15 4942031 4942110 -98552864 + (TA)n Simple_repeat Simple_repeat 2 79 0 5 622 3100 68 2 20 chr15 4942505 4942912 -98552062 + MTB LTR MaLR 1 400 0 5 622 2231 90 132 11 chr15 4942982 4943330 -98551644 + RLTR10 LTR ERVK 1 390 0 5 622 1114 230 8 4 chr15 4944487 4944737 -98550237 + Lx7 LINE L1 7156 7407 -289 5 622 309 26 0 0 chr15 4944737 4944775 -98550199 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 622 255 305 70 32 chr15 4944800 4944956 -98550018 + Lx7 LINE L1 7535 7696 0 5 622 844 105 89 0 chr15 4945060 4945184 -98549790 + B1_Mus1 SINE Alu 1 135 -13 5 622 886 92 14 14 chr15 4945184 4945327 -98549647 + (GAAA)n Simple_repeat Simple_repeat 1 143 0 5 622 21 0 0 0 chr15 4945342 4945363 -98549611 + AT_rich Low_complexity Low_complexity 1 21 0 5 622 30 77 0 0 chr15 4945383 4945448 -98549526 + AT_rich Low_complexity Low_complexity 1 65 0 5 622 904 264 5 0 chr15 4945829 4946026 -98548948 + B3 SINE B2 5 202 -14 5 622 252 0 0 0 chr15 4946026 4946054 -98548920 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 5 622 391 241 0 11 chr15 4946535 4946623 -98548351 - RSINE1 SINE B4 -76 89 3 5 622 312 48 0 0 chr15 4947053 4947095 -98547879 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 622 603 242 162 14 chr15 4947096 4947306 -98547668 + ORR1C1 LTR MaLR 28 268 -110 5 622 405 239 0 0 chr15 4947319 4947499 -98547475 + CT-rich Low_complexity Low_complexity 1 180 0 5 622 802 216 53 34 chr15 4947500 4947706 -98547268 + ORR1C2 LTR MaLR 175 384 0 5 622 1087 253 107 31 chr15 4947867 4948193 -98546781 + ORR1E LTR MaLR 1 351 -8 5 622 629 211 0 4 chr15 4948422 4948686 -98546288 + (TG)n Simple_repeat Simple_repeat 1 262 0 5 622 391 289 141 60 chr15 4948686 4948955 -98546019 - B4A SINE B4 0 292 2 5 622 249 280 41 25 chr15 4949002 4949123 -98545851 - L1M1 LINE L1 -405 5895 5773 5 622 23 54 0 0 chr15 4949133 4949170 -98545804 + AT_rich Low_complexity Low_complexity 1 37 0 5 622 772 275 15 58 chr15 4949250 4949509 -98545465 - Lx8 LINE L1 -121 7352 7105 5 622 342 315 127 6 chr15 4949505 4949772 -98545202 - L1P5 LINE L1 -396 5793 5483 5 622 245 290 40 0 chr15 4949817 4949941 -98545033 + L1MB3 LINE L1 6048 6176 -7 5 622 297 0 0 0 chr15 4950115 4950148 -98544826 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 622 892 314 7 27 chr15 4950175 4950473 -98544501 - B4A SINE B4 0 292 1 5 622 950 227 54 0 chr15 4951171 4951374 -98543600 + B3 SINE B2 3 216 0 5 622 247 307 155 32 chr15 4951502 4951546 -98543428 - FAM SINE Alu 0 311 294 5 622 778 221 7 0 chr15 4951546 4951682 -98543292 - B1_Mur2 SINE Alu -12 137 1 5 622 443 244 80 48 chr15 4951570 4951695 -98543279 - B4 SINE B4 -94 198 70 5 622 29 28 0 0 chr15 4952249 4952285 -98542689 + AT_rich Low_complexity Low_complexity 1 36 0 5 622 2473 162 138 89 chr15 4953819 4954400 -98540574 + RMER19C LTR ERVK 1 609 -2 5 622 589 239 104 0 chr15 4954499 4954633 -98540341 + B1F SINE Alu 2 149 0 5 622 725 262 10 25 chr15 4954818 4955014 -98539960 + MTEb LTR MaLR 187 379 0 5 622 327 250 160 23 chr15 4955798 4955929 -98539045 - B1F SINE Alu 0 149 1 5 622 190 368 20 59 chr15 4956420 4956521 -98538453 + MER5A DNA MER1_type 61 157 -32 5 622 1076 119 0 5 chr15 4957261 4957472 -98537502 + (GAA)n Simple_repeat Simple_repeat 1 210 0 5 622 571 301 38 19 chr15 4959309 4959468 -98535506 + B3A SINE B2 1 162 -36 5 622 288 0 0 0 chr15 4960104 4960136 -98534838 + (A)n Simple_repeat Simple_repeat 1 32 0 5 622 688 252 0 7 chr15 4960136 4960272 -98534702 + ID_B1 SINE B4 80 214 -10 5 622 213 241 0 33 chr15 4960596 4960656 -98534318 - MIRc SINE MIR -157 111 54 5 622 286 254 28 0 chr15 4962309 4962380 -98532594 - Tigger7 DNA MER2_type -52 2439 2367 5 622 495 0 0 0 chr15 4962380 4962435 -98532539 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 622 477 0 0 0 chr15 4962435 4962487 -98532487 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 622 551 339 5 76 chr15 4962487 4962685 -98532289 - B3A SINE B2 -14 184 1 5 622 308 247 0 0 chr15 4962685 4962757 -98532217 - Tigger7 DNA MER2_type -113 2378 2307 5 622 339 221 39 0 chr15 4962751 4962828 -98532146 - Tigger7 DNA MER2_type -2376 115 36 5 622 219 315 173 0 chr15 4962956 4963083 -98531891 + L3b LINE CR1 106 254 -228 5 622 481 335 112 3 chr15 4963901 4964221 -98530753 + Tigger9b DNA MER2_type 226 580 -44 5 622 213 39 0 0 chr15 4964231 4964257 -98530717 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 5 622 425 307 71 13 chr15 4964524 4964679 -98530295 + RSINE1 SINE B4 2 165 0 5 622 1043 100 62 0 chr15 4964759 4964919 -98530055 + B2_Mm1t SINE B2 2 171 -22 5 622 424 51 0 0 chr15 4964962 4965021 -98529953 + B2_Mm1a SINE B2 127 185 -8 5 622 23 0 0 0 chr15 4965030 4965053 -98529921 + AT_rich Low_complexity Low_complexity 1 23 0 5 622 709 298 38 19 chr15 4965905 4966114 -98528860 + ID_B1 SINE B4 8 220 -4 5 622 224 167 21 0 chr15 4966138 4966186 -98528788 + GA-rich Low_complexity Low_complexity 3 51 0 5 622 1094 72 0 0 chr15 4966190 4966329 -98528645 + B1_Mus1 SINE Alu 4 142 -6 5 622 1066 21 43 0 chr15 4966330 4966471 -98528503 + (GAGAA)n Simple_repeat Simple_repeat 4 150 0 5 622 283 367 112 0 chr15 4967582 4967770 -98527204 + MIR SINE MIR 49 257 -5 5 622 5259 208 83 54 chr15 4968476 4968857 -98526117 + Lx7 LINE L1 4233 4650 -1230 5 622 252 86 0 0 chr15 4968857 4968892 -98526082 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 622 5259 218 70 58 chr15 4968892 4970556 -98524418 + Lx7 LINE L1 4651 6327 -1369 5 622 333 0 0 0 chr15 4970556 4970593 -98524381 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 622 5045 246 36 70 chr15 4970593 4971460 -98523514 + Lx7 LINE L1 6328 7153 -543 5 622 1144 117 22 11 chr15 4971549 4971731 -98523243 + B2_Mm2 SINE B2 4 187 -8 5 622 232 311 13 39 chr15 4972342 4972419 -98522555 + PB1 SINE Alu 53 127 0 5 622 267 281 34 0 chr15 4973499 4973588 -98521386 + L1_Mur1 LINE L1 5461 5552 -334 5 622 3015 74 12 15 chr15 4973616 4974026 -98520948 + RLTR9E LTR ERVK 1 409 0 5 622 812 221 126 50 chr15 4974029 4974386 -98520588 + ETnERV2-int LTR ERVK 4 387 -2927 5 622 1114 142 154 72 chr15 4974396 4974714 -98520260 + ETnERV2-int LTR ERVK 1071 1414 -5992 5 622 4749 190 58 41 chr15 4974706 4976271 -98518703 + ETnERV2-int LTR ERVK 892 3448 -3958 5 622 19539 95 28 29 chr15 4976514 4976980 -98517994 + ETnERV2-int LTR ERVK 3441 3933 -3473 5 622 486 49 0 0 chr15 4976980 4977041 -98517933 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 622 19539 95 28 29 chr15 4977041 4978836 -98516138 + ETnERV2-int LTR ERVK 3934 5758 -1648 5 622 1008 54 0 26 chr15 4978836 4978989 -98515985 + L1Md_F2 LINE L1 6433 6581 -1 5 622 19539 95 28 29 chr15 4978989 4979726 -98515248 + ETnERV2-int LTR ERVK 5759 6436 -970 5 622 525 67 13 0 chr15 4979922 4979997 -98514977 + ETnERV2-int LTR ERVK 7331 7406 0 5 622 2971 91 2 22 chr15 4979997 4980414 -98514560 + RLTR9E LTR ERVK 1 409 0 5 622 813 240 23 45 chr15 4980447 4980713 -98514261 + L1MA4A LINE L1 5677 5936 -367 5 77 1165 176 84 0 chr15 4980735 4980973 -98514001 + Lx5 LINE L1 6790 7047 -3 5 623 2089 124 18 18 chr15 4981005 4981334 -98513640 + ORR1A4 LTR MaLR 1 329 0 5 623 1037 240 90 95 chr15 4982255 4982665 -98512309 + Lx2B LINE L1 6592 6999 -1 5 623 677 220 146 9 chr15 4982685 4982905 -98512069 + RMER1C Other Other 1075 1324 -18 6 623 247 272 96 10 chr15 4983477 4983581 -98511393 + PB1D10 SINE Alu 4 116 -1 6 623 234 0 0 0 chr15 4983581 4983607 -98511367 + (GAAA)n Simple_repeat Simple_repeat 1 26 0 6 623 300 362 116 0 chr15 4983607 4983745 -98511229 + HAL1-3A_ME LINE L1 2284 2437 -421 6 623 417 39 0 0 chr15 4983756 4983807 -98511167 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 6 623 483 275 90 15 chr15 4983840 4983963 -98511011 + ID_B1 SINE B4 81 214 -10 6 623 234 0 0 0 chr15 4983963 4983989 -98510985 + (ATG)n Simple_repeat Simple_repeat 2 27 0 6 623 756 68 39 0 chr15 4985359 4985462 -98509512 + U6 snRNA snRNA 1 107 0 6 623 20920 98 9 50 chr15 4985462 4989895 -98505079 + L1_Mus1 LINE L1 2331 6567 0 6 623 377 260 8 0 chr15 4990040 4990163 -98504811 + L1MA4A LINE L1 5157 5280 -863 6 623 583 261 29 312 chr15 4990274 4990324 -98504650 + L1MA4A LINE L1 5532 5583 -585 6 623 792 98 136 0 chr15 4990324 4990456 -98504518 + B1_Mur4 SINE Alu 1 150 0 6 623 583 257 26 40 chr15 4990456 4990674 -98504300 + L1MA4A LINE L1 5572 5787 -504 6 623 331 217 89 38 chr15 4990749 4990907 -98504067 + L1MA4A LINE L1 5770 5935 -365 6 623 787 70 9 9 chr15 4990929 4991045 -98503929 + (TAGA)n Simple_repeat Simple_repeat 1 116 0 6 623 265 311 160 0 chr15 4991171 4991290 -98503684 + B1F1 SINE Alu 4 141 -8 6 623 210 299 0 44 chr15 4992055 4992146 -98502828 + CT-rich Low_complexity Low_complexity 1 87 0 6 623 1583 43 5 0 chr15 4992540 4992726 -98502248 - B2_Mm1t SINE B2 -6 187 1 6 623 1155 105 60 6 chr15 4992837 4993019 -98501955 - B2_Mm1t SINE B2 0 193 2 6 623 318 26 0 0 chr15 4993257 4993296 -98501678 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 623 21 71 0 0 chr15 4994101 4994143 -98500831 + AT_rich Low_complexity Low_complexity 1 42 0 6 623 21 57 0 0 chr15 4995470 4995505 -98499469 + AT_rich Low_complexity Low_complexity 1 35 0 6 623 539 119 0 53 chr15 4996356 4996489 -98498485 + CT-rich Low_complexity Low_complexity 2 127 0 6 623 186 156 0 0 chr15 4996485 4996530 -98498444 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 6 623 386 200 0 0 chr15 4996572 4996637 -98498337 - MER81 DNA AcHobo -6 108 44 6 623 1049 155 130 0 chr15 4997633 4997833 -98497141 + URR1A DNA MER1_type 1 226 0 6 623 229 371 14 0 chr15 4998346 4998416 -98496558 - L2c LINE L2 -219 3168 3098 6 623 1107 294 13 60 chr15 4998443 4998895 -98496079 + Lx7 LINE L1 6903 7333 -363 6 623 257 278 20 10 chr15 4998961 4999059 -98495915 + Lx7 LINE L1 7577 7675 -21 6 623 240 190 12 25 chr15 4999200 4999281 -98495693 + (TA)n Simple_repeat Simple_repeat 1 80 0 6 623 1575 172 249 0 chr15 5000480 5000817 -98494157 + MTC LTR MaLR 1 421 0 1 623 463 273 1 0 chr15 5001606 5001718 -98493256 + PB1D7 SINE Alu 2 113 -7 2 623 207 69 0 0 chr15 5001722 5001751 -98493223 + (ATG)n Simple_repeat Simple_repeat 2 30 0 3 623 220 268 36 0 chr15 5001764 5001820 -98493154 + ID4 SINE ID 15 72 -11 4 623 577 354 0 12 chr15 5001971 5002131 -98492843 + RSINE1 SINE B4 8 165 0 5 623 230 191 21 0 chr15 5002131 5002178 -98492796 + (CATATA)n Simple_repeat Simple_repeat 3 50 0 6 623 14253 59 0 6 chr15 5002368 5004147 -98490827 + L1_Mm LINE L1 3817 5586 -297 7 623 8249 41 10 0 chr15 5004147 5005119 -98489855 + L1Md_F2 LINE L1 5587 6568 -14 8 623 3836 237 82 18 chr15 5005322 5005571 -98489403 + Lx6 LINE L1 6485 6754 -706 9 623 240 35 0 0 chr15 5005571 5005600 -98489374 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 623 3836 237 82 18 chr15 5005600 5006253 -98488721 + Lx6 LINE L1 6755 7444 -16 9 623 227 120 18 91 chr15 5006273 5006328 -98488646 - U2 snRNA snRNA -137 51 1 1 623 21 57 0 0 chr15 5006389 5006424 -98488550 + AT_rich Low_complexity Low_complexity 1 35 0 1 623 530 205 94 0 chr15 5007191 5007308 -98487666 + ID_B1 SINE B4 93 220 -4 1 623 2232 174 14 19 chr15 5007659 5008074 -98486900 + MTC LTR MaLR 1 413 -8 1 623 825 189 15 55 chr15 5009614 5009815 -98485159 + L1MA8 LINE L1 5581 5773 -518 1 623 389 253 15 146 chr15 5009927 5010126 -98484848 + L1MA8 LINE L1 5790 5962 -329 1 623 685 306 167 6 chr15 5010145 5010480 -98484494 + Lx8 LINE L1 6940 7328 -145 1 623 243 0 0 0 chr15 5010480 5010507 -98484467 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 623 618 212 118 29 chr15 5010717 5010921 -98484053 + MTE2b LTR MaLR 150 371 -8 1 623 571 294 78 116 chr15 5012100 5012162 -98482812 + B4A SINE B4 14 76 -216 1 623 1622 199 66 177 chr15 5012162 5012250 -98482724 + RLTR18B LTR ERVK 1 81 -431 2 623 378 0 0 0 chr15 5012250 5012292 -98482682 + (GA)n Simple_repeat Simple_repeat 2 43 0 2 623 1622 199 66 177 chr15 5012292 5012775 -98482199 + RLTR18B LTR ERVK 82 508 -4 2 623 571 294 78 116 chr15 5012775 5012954 -98482020 + B4A SINE B4 77 246 -46 1 623 21 36 0 0 chr15 5013112 5013140 -98481834 + AT_rich Low_complexity Low_complexity 1 28 0 2 623 313 326 38 52 chr15 5014129 5014454 -98480520 - MLT1A1 LTR MaLR -2 406 45 2 623 495 260 102 0 chr15 5014603 5014730 -98480244 - RSINE1 SINE B4 -13 152 13 2 623 976 234 5 19 chr15 5014767 5014980 -98479994 - B3 SINE B2 -5 211 2 2 623 1969 130 84 94 chr15 5015732 5016234 -98478740 - RLTR1B LTR ERV1 0 512 1 2 623 7927 93 18 0 chr15 5016522 5017975 -98476999 - L1_Mus3 LINE L1 -3 6635 5146 2 623 333 0 0 0 chr15 5018246 5018283 -98476691 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 623 212 77 0 25 chr15 5018315 5018355 -98476619 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2 623 253 176 39 51 chr15 5018675 5018753 -98476221 - MER103 DNA DNA -80 86 10 3 623 410 111 12 47 chr15 5020078 5020163 -98474811 + Lx3C LINE L1 6893 6974 -2 3 623 26 0 0 0 chr15 5020165 5020191 -98474783 + AT_rich Low_complexity Low_complexity 1 26 0 3 623 8377 34 6 4 chr15 5020436 5021584 -98473390 - L1Md_F3 LINE L1 -14 6570 5427 3 623 822 209 26 42 chr15 5021606 5021796 -98473178 - B3 SINE B2 0 216 30 3 623 437 200 0 10 chr15 5021774 5021870 -98473104 + B2_Mm2 SINE B2 95 189 -6 3 623 472 248 134 30 chr15 5021872 5022085 -98472889 + L1MA5A LINE L1 5600 5831 -466 3 623 1025 195 55 74 chr15 5022282 5022592 -98472382 - Lx9 LINE L1 0 7644 7341 3 623 550 240 0 32 chr15 5022663 5022788 -98472186 - Lx9 LINE L1 -267 7377 7257 3 623 274 309 31 16 chr15 5022776 5022904 -98472070 - L1M4 LINE L1 -1477 4669 4540 3 623 221 237 0 0 chr15 5023009 5023047 -98471927 + RSINE1 SINE B4 2 39 -126 4 623 226 284 12 12 chr15 5023099 5023181 -98471793 + (CA)n Simple_repeat Simple_repeat 1 82 0 4 623 2532 203 73 51 chr15 5023406 5024077 -98470897 - RLTR13C1 LTR ERVK -297 686 1 4 623 23 0 0 0 chr15 5024967 5024990 -98469984 + AT_rich Low_complexity Low_complexity 1 23 0 4 623 952 269 23 96 chr15 5025198 5025610 -98469364 + MTD LTR MaLR 10 414 -5 4 623 245 303 22 11 chr15 5025691 5025781 -98469193 + L2 LINE L2 1577 1667 -1752 4 623 586 289 36 0 chr15 5025789 5025955 -98469019 - RMER30 DNA MER1_type -9 193 22 4 623 516 317 40 15 chr15 5025977 5026179 -98468795 + Charlie12 DNA MER1_type 398 604 -2269 4 623 327 256 23 0 chr15 5026302 5026431 -98468543 + Charlie12 DNA MER1_type 625 756 -2117 4 623 246 62 0 0 chr15 5026441 5026473 -98468501 + (A)n Simple_repeat Simple_repeat 1 32 0 4 623 275 51 75 25 chr15 5026542 5026622 -98468352 + T-rich Low_complexity Low_complexity 1 84 0 4 623 973 295 36 55 chr15 5026672 5026708 -98468266 + Charlie12 DNA MER1_type 914 945 -1928 4 623 3362 33 5 2 chr15 5026708 5027103 -98467871 + MTA_Mm LTR MaLR 1 396 0 5 623 973 295 36 55 chr15 5027103 5027504 -98467470 + Charlie12 DNA MER1_type 946 1343 -1530 4 623 1029 90 119 51 chr15 5027548 5027724 -98467250 + B2_Mm2 SINE B2 1 188 -7 5 623 765 302 20 4 chr15 5027755 5028005 -98466969 + Charlie12 DNA MER1_type 1504 1757 -1116 4 623 2037 154 63 0 chr15 5028005 5028369 -98466605 - ORR1B1 LTR MaLR 0 394 8 5 623 2583 248 57 85 chr15 5028375 5028740 -98466234 + Charlie12 DNA MER1_type 1759 2108 -765 4 623 1399 81 11 0 chr15 5028740 5028926 -98466048 - B2_Mm1t SINE B2 -3 190 3 5 623 2583 248 57 85 chr15 5028926 5029457 -98465517 + Charlie12 DNA MER1_type 2109 2630 -243 4 623 225 0 0 0 chr15 5029457 5029482 -98465492 + (TGG)n Simple_repeat Simple_repeat 1 25 0 5 623 2583 248 57 85 chr15 5029482 5029583 -98465391 + Charlie12 DNA MER1_type 2631 2729 -144 4 623 606 138 161 8 chr15 5029599 5029723 -98465251 - B1_Mus1 SINE Alu 0 148 6 5 623 434 209 183 15 chr15 5029730 5029861 -98465113 + Charlie12 DNA MER1_type 2716 2868 -5 4 623 405 214 124 0 chr15 5029938 5030027 -98464947 + PB1D10 SINE Alu 9 108 -9 5 623 365 295 0 0 chr15 5030046 5030141 -98464833 + B1_Mur2 SINE Alu 10 104 -45 5 623 943 69 130 0 chr15 5030387 5030518 -98464456 + B1_Mus1 SINE Alu 1 148 0 5 623 1415 159 77 86 chr15 5030953 5031097 -98463877 + ORR1C2 LTR MaLR 50 169 -215 5 623 565 66 22 0 chr15 5031097 5031188 -98463786 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 6 623 1415 159 77 86 chr15 5031188 5031381 -98463593 + ORR1C2 LTR MaLR 170 383 -1 5 623 895 256 26 98 chr15 5031647 5031954 -98463020 + B4 SINE B4 4 288 -4 6 623 562 200 61 46 chr15 5032264 5032395 -98462579 - B1_Mur1 SINE Alu -15 134 2 6 623 273 191 14 14 chr15 5032416 5032485 -98462489 - MLT1A1 LTR MaLR 0 408 340 6 623 349 216 44 33 chr15 5033112 5033203 -98461771 + RSINE1 SINE B4 43 134 -31 6 623 356 174 80 80 chr15 5033268 5033368 -98461606 + B2_Mm2 SINE B2 82 181 -14 6 623 521 225 130 15 chr15 5033561 5033692 -98461282 + B1F2 SINE Alu 4 149 0 6 623 1397 232 122 38 chr15 5033737 5034262 -98460712 + Lx8 LINE L1 6925 7398 -75 6 623 332 282 124 35 chr15 5034347 5034516 -98460458 + LTR52 LTR ERVL 209 392 -29 6 623 1175 101 89 0 chr15 5034727 5034906 -98460068 - B2_Mm2 SINE B2 0 195 1 6 623 1446 206 90 15 chr15 5034979 5035319 -98459655 - MTD LTR MaLR 0 419 26 7 623 383 235 39 0 chr15 5035396 5035498 -98459476 + B1F1 SINE Alu 44 149 0 7 623 903 19 0 0 chr15 5035533 5035638 -98459336 + (GAAA)n Simple_repeat Simple_repeat 2 106 0 7 623 255 301 0 0 chr15 5035701 5035784 -98459190 + (CA)n Simple_repeat Simple_repeat 2 84 0 7 623 381 22 0 0 chr15 5036459 5036505 -98458469 + (TC)n Simple_repeat Simple_repeat 1 46 0 7 623 261 22 21 42 chr15 5036506 5036554 -98458420 + (TTGTG)n Simple_repeat Simple_repeat 3 49 0 7 623 308 229 102 20 chr15 5036564 5036662 -98458312 - B1F SINE Alu -2 147 42 7 623 522 284 78 117 chr15 5036799 5037118 -98457856 + RMER5 LTR ERV1 33 339 -195 7 623 971 169 44 11 chr15 5037118 5037298 -98457676 - B2_Mm2 SINE B2 -9 186 1 7 623 522 284 78 117 chr15 5037298 5037476 -98457498 + RMER5 LTR ERV1 340 511 -23 7 623 3195 116 14 38 chr15 5037523 5038026 -98456948 - Lx3C LINE L1 -7 6969 6479 7 623 3081 50 42 3 chr15 5038054 5038435 -98456539 - MTA_Mm LTR MaLR 0 396 1 8 623 1418 259 88 10 chr15 5038435 5038845 -98456129 + Lx6 LINE L1 7019 7460 0 8 623 251 146 0 0 chr15 5038928 5038969 -98456005 - U2 snRNA snRNA -147 41 1 8 623 248 229 59 84 chr15 5039194 5039313 -98455661 + L1MC5 LINE L1 7632 7747 -214 8 623 548 329 23 50 chr15 5039868 5040127 -98454847 + RLTR26 LTR ERVK 168 419 -223 8 623 1501 6 6 6 chr15 5040527 5040706 -98454268 + (GAA)n Simple_repeat Simple_repeat 2 180 0 8 623 465 19 0 0 chr15 5040725 5040779 -98454195 + (GGAA)n Simple_repeat Simple_repeat 4 57 0 8 623 327 49 0 0 chr15 5040784 5040825 -98454149 + (GGGGA)n Simple_repeat Simple_repeat 4 44 0 8 623 1445 34 6 0 chr15 5040831 5041010 -98453964 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 8 623 305 193 172 46 chr15 5041020 5041107 -98453867 + B3 SINE B2 1 98 -118 8 623 245 233 31 108 chr15 5041408 5041538 -98453436 + RNLTR23 LTR ERVK 475 594 -48 9 623 2383 32 0 54 chr15 5041546 5041879 -98453095 - IAPEY2_LTR LTR ERVK -42 315 1 9 623 2665 122 201 4 chr15 5041997 5042474 -98452500 - L1_Mm LINE L1 -491 5392 4822 9 623 3836 100 5 7 chr15 5043245 5043800 -98451174 - L1_Mm LINE L1 -1072 4811 4258 9 623 7899 68 28 14 chr15 5043802 5045032 -98449942 + L1_Mus3 LINE L1 5392 6638 0 9 623 273 230 65 39 chr15 5045078 5045155 -98449819 + MTD LTR MaLR 5 83 -336 9 623 777 209 204 36 chr15 5045487 5045780 -98449194 + MTD LTR MaLR 50 370 -30 9 623 292 333 61 0 chr15 5045762 5045876 -98449098 - B1F1 SINE Alu -26 123 3 9 623 204 97 0 0 chr15 5045896 5045927 -98449047 + (ATTG)n Simple_repeat Simple_repeat 1 31 0 9 623 262 262 34 56 chr15 5046734 5046809 -98448165 + RSINE1 SINE B4 77 150 -15 9 623 204 125 0 0 chr15 5046809 5046841 -98448133 + (CA)n Simple_repeat Simple_repeat 1 32 0 9 623 262 262 34 56 chr15 5046841 5046854 -98448120 + RSINE1 SINE B4 151 163 -2 9 623 313 266 73 0 chr15 5046983 5047092 -98447882 - PB1D10 SINE Alu 0 117 1 9 623 441 0 0 0 chr15 5047908 5047957 -98447017 + (GTTTG)n Simple_repeat Simple_repeat 5 53 0 1 623 482 136 63 214 chr15 5048041 5048200 -98446774 - B1_Mur1 SINE Alu -13 136 2 1 623 208 286 28 22 chr15 5048703 5048882 -98446092 + (GGATG)n Simple_repeat Simple_repeat 1 180 0 1 623 784 278 9 23 chr15 5051191 5051269 -98443705 + ID SINE ID 5 82 -142 1 623 180 97 0 0 chr15 5051269 5051300 -98443674 + (CTAA)n Simple_repeat Simple_repeat 3 33 0 1 623 784 278 9 23 chr15 5051300 5051435 -98443539 + ID_B1 SINE B4 83 215 -9 1 623 1139 75 0 0 chr15 5051818 5051965 -98443009 + B1_Mm SINE Alu 1 147 0 1 623 504 320 45 5 chr15 5052083 5052281 -98442693 + ID_B1 SINE B4 3 208 -16 1 623 372 287 260 48 chr15 5052334 5052792 -98442182 + Lx8 LINE L1 6909 7463 -10 1 623 1328 86 0 105 chr15 5052825 5053034 -98441940 + B2_Mm2 SINE B2 2 188 -7 1 623 1727 21 0 0 chr15 5053197 5053389 -98441585 + B2_Mm1a SINE B2 2 193 0 1 623 285 29 0 0 chr15 5053492 5053526 -98441448 + (T)n Simple_repeat Simple_repeat 1 34 0 1 623 1408 79 32 0 chr15 5053620 5053809 -98441165 + B2_Mm2 SINE B2 1 195 0 1 623 526 272 48 0 chr15 5053859 5054006 -98440968 + RSINE1 SINE B4 4 157 -8 1 623 535 279 62 78 chr15 5054049 5054150 -98440824 + L1MA5 LINE L1 6048 6140 -160 1 623 346 216 44 26 chr15 5054150 5054264 -98440710 - PB1D10 SINE Alu 0 117 2 1 623 535 279 62 78 chr15 5054264 5054419 -98440555 + L1MA5 LINE L1 6141 6300 0 1 623 23 0 0 0 chr15 5054420 5054443 -98440531 + AT_rich Low_complexity Low_complexity 1 23 0 1 623 651 225 14 0 chr15 5054494 5054636 -98440338 - B1F1 SINE Alu -5 144 1 1 623 325 330 0 0 chr15 5054637 5054725 -98440249 + MER2B DNA MER2_type 240 327 -9 1 623 327 252 20 38 chr15 5055553 5055660 -98439314 - PB1 SINE Alu -93 218 22 1 623 698 308 50 71 chr15 5055934 5056315 -98438659 + MTE2a LTR MaLR 7 379 0 1 623 1373 77 22 0 chr15 5056534 5056716 -98438258 - B2_Mm2 SINE B2 -8 187 2 1 623 432 97 0 0 chr15 5056910 5056972 -98438002 + (T)n Simple_repeat Simple_repeat 1 62 0 1 623 1149 82 0 0 chr15 5056974 5057120 -98437854 - B1_Mus1 SINE Alu -2 146 1 1 623 23 0 0 0 chr15 5057279 5057302 -98437672 + AT_rich Low_complexity Low_complexity 1 23 0 1 623 711 98 0 0 chr15 5058597 5058720 -98436254 + (TC)n Simple_repeat Simple_repeat 2 124 0 1 623 261 0 0 0 chr15 5058720 5058748 -98436226 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 623 591 203 7 42 chr15 5058882 5059026 -98435948 + B1F2 SINE Alu 11 149 0 1 623 229 268 18 0 chr15 5059179 5059235 -98435739 + L1MC LINE L1 5589 5645 -2237 1 623 543 207 9 26 chr15 5059235 5059349 -98435625 + B3 SINE B2 1 112 -104 1 623 1097 64 14 0 chr15 5059349 5059489 -98435485 + B1_Mur4 SINE Alu 1 142 -8 1 623 477 171 0 0 chr15 5059494 5059582 -98435392 + (TA)n Simple_repeat Simple_repeat 1 88 0 1 623 401 242 20 40 chr15 5059585 5059684 -98435290 + B3 SINE B2 100 198 0 1 623 360 226 95 0 chr15 5059876 5059960 -98435014 - B3 SINE B2 -124 92 1 1 623 485 192 115 0 chr15 5060066 5060170 -98434804 + B1_Mur1 SINE Alu 1 116 -33 1 623 208 0 0 59 chr15 5060170 5060204 -98434770 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 623 671 179 104 0 chr15 5060258 5060392 -98434582 + B1_Mur1 SINE Alu 1 148 -1 1 623 801 230 47 0 chr15 5060555 5060746 -98434228 + B3 SINE B2 10 209 -7 1 623 715 225 7 14 chr15 5060764 5060908 -98434066 - B1_Mur2 SINE Alu -5 144 2 1 623 632 191 50 0 chr15 5061067 5061208 -98433766 + B1_Mus1 SINE Alu 1 148 0 1 623 641 252 73 0 chr15 5061259 5061410 -98433564 - B3A SINE B2 -34 164 3 1 623 22 0 0 0 chr15 5061410 5061432 -98433542 + AT_rich Low_complexity Low_complexity 1 22 0 1 623 300 154 0 0 chr15 5061557 5061609 -98433365 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 623 236 279 15 0 chr15 5061689 5061757 -98433217 + PB1 SINE Alu 42 110 -17 1 623 599 228 29 7 chr15 5061763 5061900 -98433074 + B1_Mur1 SINE Alu 1 140 -9 1 623 1705 163 89 20 chr15 5062480 5062830 -98432144 - ORR1C1 LTR MaLR 0 378 5 1 623 3362 228 74 17 chr15 5062847 5063656 -98431318 + Lx7 LINE L1 6425 7279 -417 1 623 922 31 93 0 chr15 5063681 5063810 -98431164 - B1_Mm SINE Alu 0 147 7 1 623 443 194 37 15 chr15 5063986 5064122 -98430852 + G-rich Low_complexity Low_complexity 3 141 0 1 623 1358 61 60 6 chr15 5064207 5064389 -98430585 + B2_Mm2 SINE B2 1 192 -3 1 623 466 227 9 0 chr15 5064405 5064515 -98430459 + B1_Mur1 SINE Alu 5 115 -34 1 623 474 129 59 0 chr15 5064584 5064669 -98430305 + PB1 SINE Alu 31 120 -7 1 623 227 337 11 0 chr15 5065107 5065196 -98429778 + MLT1E3 LTR MaLR 115 204 -420 1 623 289 188 0 68 chr15 5065340 5065363 -98429611 + ID_B1 SINE B4 65 133 -91 1 623 346 20 20 0 chr15 5065363 5065414 -98429560 + B1_Mus1 SINE Alu 2 53 -95 1 623 403 210 80 0 chr15 5065417 5065517 -98429457 - L1MB1 LINE L1 -44 6124 6017 1 623 243 229 186 0 chr15 5069056 5069126 -98425848 + PB1D9 SINE Alu 21 103 -17 1 623 500 156 101 72 chr15 5069362 5069500 -98425474 + B1_Mur4 SINE Alu 1 142 -8 1 623 576 109 20 10 chr15 5069817 5069919 -98425055 - B2_Mm2 SINE B2 -12 183 81 1 623 275 215 106 11 chr15 5069934 5070028 -98424946 - PB1D9 SINE Alu 0 120 18 1 623 591 251 131 0 chr15 5070058 5070233 -98424741 + B3 SINE B2 8 205 -11 1 623 21 57 0 0 chr15 5070586 5070621 -98424353 + AT_rich Low_complexity Low_complexity 1 35 0 1 623 660 66 0 0 chr15 5072236 5072327 -98422647 + B1_Mus2 SINE Alu 1 91 -56 1 623 784 50 223 16 chr15 5073036 5073157 -98421817 - B1_Mus1 SINE Alu 0 148 3 1 623 330 177 32 0 chr15 5073179 5073241 -98421733 - B1_Mm SINE Alu 0 147 84 1 623 1470 33 44 0 chr15 5073694 5073875 -98421099 + B2_Mm1t SINE B2 2 190 -3 1 623 399 289 22 29 chr15 5073915 5074054 -98420920 + ID_B1 SINE B4 84 221 -3 1 623 204 229 62 31 chr15 5074098 5074260 -98420714 + (TA)n Simple_repeat Simple_repeat 2 168 0 1 623 742 188 58 0 chr15 5074263 5074401 -98420573 - B1_Mur4 SINE Alu -4 146 1 1 623 1686 179 42 22 chr15 5074416 5074771 -98420203 - ORR1D1 LTR MaLR -12 362 1 1 623 292 241 204 47 chr15 5074774 5074947 -98420027 + L1M5 LINE L1 5409 5608 -571 1 623 2349 178 186 8 chr15 5075038 5075526 -98419448 - RMER15 LTR ERVL 0 575 1 1 623 615 209 0 0 chr15 5075528 5075638 -98419336 - RMER15-int LTR ERVL -28 4971 4862 1 623 725 100 142 0 chr15 5075659 5075779 -98419195 + B1_Mm SINE Alu 11 147 0 1 623 268 246 0 17 chr15 5075802 5075860 -98419114 - RMER15-int LTR ERVL -229 4770 4714 1 623 2373 40 0 0 chr15 5075861 5076134 -98418840 + L1Md_F2 LINE L1 6063 6335 -247 1 623 1037 37 0 43 chr15 5076134 5076275 -98418699 + L1Md_F2 LINE L1 6434 6568 -14 1 623 1218 41 0 0 chr15 5076287 5076434 -98418540 + B1_Mus2 SINE Alu 1 147 0 1 623 23 0 0 0 chr15 5076439 5076462 -98418512 + AT_rich Low_complexity Low_complexity 1 23 0 1 623 296 257 52 52 chr15 5076479 5076594 -98418380 - Lx8 LINE L1 -694 6779 6665 1 623 565 248 0 0 chr15 5076596 5076705 -98418269 - RMER15-int LTR ERVL -4041 958 850 1 623 1582 183 42 39 chr15 5076706 5076944 -98418030 - ORR1C2 LTR MaLR -1 383 134 1 623 4489 106 54 31 chr15 5076944 5077683 -98417291 - RMER6A LTR ERVK 0 756 1 1 623 1582 183 42 39 chr15 5077683 5077813 -98417161 - ORR1C2 LTR MaLR -251 133 13 1 623 2876 171 8 30 chr15 5077813 5078134 -98416840 - RLTR28 LTR ERVL 0 524 216 1 623 1383 55 32 11 chr15 5078134 5078319 -98416655 - B2_Mm2 SINE B2 -5 190 2 1 623 2876 171 8 30 chr15 5078319 5078533 -98416441 - RLTR28 LTR ERVL -309 215 1 1 623 1582 183 42 39 chr15 5078533 5078544 -98416430 - ORR1C2 LTR MaLR -372 12 2 1 623 219 114 0 0 chr15 5078628 5078663 -98416311 + (CCCCCT)n Simple_repeat Simple_repeat 6 40 0 1 623 2223 242 77 47 chr15 5078663 5079015 -98415959 - RMER15-int LTR ERVL -4370 629 258 1 623 1429 70 27 0 chr15 5079015 5079201 -98415773 - B2_Mm1t SINE B2 -2 191 1 1 623 2223 242 77 47 chr15 5079201 5079447 -98415527 - RMER15-int LTR ERVL -4742 257 13 1 623 2601 162 48 103 chr15 5079448 5079968 -98415006 - RMER15 LTR ERVL -4 571 80 1 623 313 200 11 32 chr15 5079968 5080061 -98414913 - Lx4B LINE L1 -7 7051 6961 1 623 2601 162 48 103 chr15 5080061 5080144 -98414830 - RMER15 LTR ERVL -496 79 1 1 623 1408 58 17 0 chr15 5080219 5080391 -98414583 - B2_Mm2 SINE B2 -19 176 2 1 623 1261 20 0 20 chr15 5080425 5080575 -98414399 - B1_Mus1 SINE Alu -1 147 1 1 623 514 259 14 28 chr15 5080592 5080735 -98414239 + L1ME1 LINE L1 6024 6164 -15 1 623 2746 172 37 32 chr15 5080928 5081151 -98413823 + Lx9 LINE L1 6918 7128 -516 1 623 2811 70 29 41 chr15 5081151 5081567 -98413407 + RLTR10A LTR ERVK 1 411 0 1 623 2746 172 37 32 chr15 5081567 5081878 -98413096 + Lx9 LINE L1 7129 7455 -189 1 623 609 105 5 1 chr15 5081927 5082030 -98412944 - ORR1A4 LTR MaLR 0 378 235 1 623 280 307 92 57 chr15 5082114 5082313 -98412661 + MT2A LTR ERVL 241 456 -77 1 623 378 0 0 0 chr15 5082313 5082355 -98412619 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 623 280 307 92 57 chr15 5082355 5082438 -98412536 + MT2A LTR ERVL 457 533 0 1 623 1350 85 21 0 chr15 5082667 5082855 -98412119 + B2_Mm1t SINE B2 2 193 0 1 623 528 93 0 0 chr15 5082855 5082930 -98412044 + (GGA)n Simple_repeat Simple_repeat 2 76 0 1 623 1050 84 0 0 chr15 5082943 5083085 -98411889 + B1_Mus1 SINE Alu 1 142 -6 1 623 252 86 0 0 chr15 5083088 5083123 -98411851 + (A)n Simple_repeat Simple_repeat 1 35 0 1 623 2012 154 28 23 chr15 5083218 5083609 -98411365 + MTB_Mm LTR MaLR 1 393 -14 1 623 308 314 55 7 chr15 5083661 5083781 -98411193 + ORR1E LTR MaLR 36 174 -196 1 623 570 29 0 0 chr15 5083781 5083849 -98411125 + (TCC)n Simple_repeat Simple_repeat 3 70 0 1 623 241 322 169 24 chr15 5083849 5083941 -98411033 + ORR1E LTR MaLR 175 278 -92 1 623 525 276 22 28 chr15 5083962 5084141 -98410833 + MTC-int LTR MaLR 56 233 -1025 1 623 1943 137 153 24 chr15 5084142 5084561 -98410413 - RLTR12B LTR ERVK -43 485 13 1 623 739 294 34 11 chr15 5084577 5084845 -98410129 + MTC-int LTR MaLR 256 529 -729 1 623 837 279 44 58 chr15 5084870 5084935 -98410039 - RLTR11A2 LTR ERVK -116 411 342 1 623 1058 84 21 0 chr15 5084935 5085077 -98409897 - B1_Mus2 SINE Alu -1 146 2 2 623 837 279 44 58 chr15 5085077 5085422 -98409552 - RLTR11A2 LTR ERVK -186 341 7 1 623 1035 258 38 71 chr15 5085435 5085802 -98409172 + ORR1E LTR MaLR 3 357 -2 2 623 849 326 41 26 chr15 5085815 5086119 -98408855 + MLT1A0 LTR MaLR 4 317 -48 2 623 2498 29 16 245 chr15 5086119 5086625 -98408349 - RLTR10 LTR ERVK 0 390 1 2 623 849 326 41 26 chr15 5086625 5086660 -98408314 + MLT1A0 LTR MaLR 318 348 -17 2 623 619 275 163 35 chr15 5086684 5087027 -98407947 + L1MC3 LINE L1 6583 6969 -816 2 623 1246 40 0 20 chr15 5087027 5087178 -98407796 + B1_Mus1 SINE Alu 1 148 0 2 623 325 314 137 62 chr15 5087178 5087246 -98407728 + L1MC3 LINE L1 6998 7055 -827 2 623 269 237 13 26 chr15 5087253 5087331 -98407643 + PB1D10 SINE Alu 6 82 -35 2 623 1469 194 17 24 chr15 5087332 5087627 -98407347 - ORR1D1 LTR MaLR 0 374 82 2 623 518 235 89 25 chr15 5087683 5087840 -98407134 - B3A SINE B2 -16 182 16 2 623 262 211 83 95 chr15 5087847 5087931 -98407043 - B3A SINE B2 -114 84 2 2 623 498 298 173 9 chr15 5087935 5088264 -98406710 + L1MC3 LINE L1 7130 7512 -273 2 623 727 326 155 19 chr15 5088459 5088872 -98406102 + MER21B LTR ERV1 282 750 -113 2 623 399 68 0 0 chr15 5088911 5088970 -98406004 + (T)n Simple_repeat Simple_repeat 1 59 0 2 623 365 258 10 10 chr15 5088981 5089079 -98405895 - MLT1A0 LTR MaLR -18 347 250 2 623 398 318 40 0 chr15 5089321 5089447 -98405527 - MTEa LTR MaLR -75 304 174 2 623 231 297 0 15 chr15 5089509 5089574 -98405400 - RSINE1 SINE B4 -100 65 2 2 623 940 169 197 0 chr15 5090602 5090780 -98404194 + B3 SINE B2 1 213 -3 2 623 1271 73 68 0 chr15 5090813 5090990 -98403984 + B2_Mm1a SINE B2 1 189 -4 2 623 24 0 0 0 chr15 5091102 5091126 -98403848 + AT_rich Low_complexity Low_complexity 1 24 0 2 623 1177 68 0 0 chr15 5091266 5091412 -98403562 + B1_Mm SINE Alu 1 146 -1 2 623 234 156 0 0 chr15 5091413 5091458 -98403516 + A-rich Low_complexity Low_complexity 1 45 0 2 623 333 0 0 0 chr15 5091608 5091645 -98403329 + (CAAAC)n Simple_repeat Simple_repeat 3 39 0 2 623 509 299 34 0 chr15 5091988 5092135 -98402839 - RSINE1 SINE B4 -2 163 12 2 623 572 289 69 5 chr15 5092157 5092359 -98402615 - ID_B1 SINE B4 -8 216 2 2 623 898 158 94 47 chr15 5092569 5092782 -98402192 + URR1B DNA MER1_type 3 225 0 2 623 239 269 77 77 chr15 5092678 5092795 -98402179 - CYRA11_Mm Unknown Y-chromosome -344 273 157 2 623 252 0 0 0 chr15 5092936 5092964 -98402010 + (A)n Simple_repeat Simple_repeat 1 28 0 2 623 223 247 11 21 chr15 5093773 5093868 -98401106 + (CCCCG)n Simple_repeat Simple_repeat 4 97 0 2 623 23 0 0 0 chr15 5094268 5094291 -98400683 + GC_rich Low_complexity Low_complexity 1 23 0 2 623 327 228 128 21 chr15 5095325 5095419 -98399555 - PB1 SINE Alu -3 124 21 2 623 2338 77 51 0 chr15 5096054 5096365 -98398609 - ORR1A2 LTR MaLR 0 327 1 2 623 834 168 200 6 chr15 5096637 5096817 -98398157 - B3 SINE B2 -1 215 1 2 623 431 140 20 0 chr15 5096867 5096967 -98398007 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 2 623 609 160 112 0 chr15 5096973 5097098 -98397876 - B1_Mur4 SINE Alu -7 143 5 2 623 213 94 0 0 chr15 5097260 5097292 -98397682 + (T)n Simple_repeat Simple_repeat 1 32 0 2 623 963 202 46 27 chr15 5097337 5097556 -98397418 - ID_B1 SINE B4 0 224 2 2 623 954 68 45 0 chr15 5097757 5097889 -98397085 - B1_Mus1 SINE Alu -9 139 2 2 623 878 197 25 12 chr15 5098177 5098382 -98396592 + B2_Mm2 SINE B2 2 203 -13 2 623 218 105 26 0 chr15 5098426 5098464 -98396510 - B3 SINE B2 -175 41 3 2 623 202 285 164 30 chr15 5099521 5099655 -98395319 + MIR3 SINE MIR 3 154 -54 2 623 203 250 0 0 chr15 5099811 5099855 -98395119 + GA-rich Low_complexity Low_complexity 1 44 0 2 623 225 0 0 0 chr15 5099865 5099890 -98395084 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 623 592 173 68 38 chr15 5099890 5100022 -98394952 - B1_Mur3 SINE Alu -13 136 1 2 623 342 0 0 0 chr15 5100117 5100155 -98394819 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 2 623 1231 194 34 99 chr15 5100501 5100568 -98394406 - ORR1D1 LTR MaLR -3 371 306 2 623 1130 58 0 0 chr15 5100568 5100705 -98394269 + B1_Mus1 SINE Alu 2 138 -10 2 623 1231 194 34 99 chr15 5100705 5100874 -98394100 - ORR1D1 LTR MaLR -69 305 163 2 623 234 62 0 0 chr15 5100874 5100906 -98394068 + (CAGA)n Simple_repeat Simple_repeat 4 35 0 2 623 1231 194 34 99 chr15 5100906 5101022 -98393952 - ORR1D1 LTR MaLR -212 162 41 2 623 607 33 0 109 chr15 5101352 5101453 -98393521 - L1Md_T LINE L1 0 6582 6493 2 623 1481 48 16 21 chr15 5101484 5101674 -98393300 - B2_Mm1a SINE B2 -4 189 1 2 623 242 236 0 0 chr15 5101882 5101937 -98393037 - B3 SINE B2 -161 55 1 2 623 212 228 18 0 chr15 5101946 5102003 -98392971 - PB1D10 SINE Alu -29 88 31 2 623 1216 81 116 0 chr15 5102024 5102197 -98392777 - B2_Mm2 SINE B2 -1 194 2 2 623 317 265 84 24 chr15 5102224 5102390 -98392584 - MLT1C LTR MaLR -2 465 290 2 623 1412 75 27 5 chr15 5102546 5102733 -98392241 - B2_Mm2 SINE B2 -4 191 1 2 623 437 269 121 36 chr15 5102844 5103010 -98391964 - B4A SINE B4 -10 282 103 2 623 523 271 21 14 chr15 5103141 5103283 -98391691 - B1_Mus2 SINE Alu 0 147 5 2 623 31 68 0 0 chr15 5103305 5103364 -98391610 + AT_rich Low_complexity Low_complexity 1 59 0 2 623 270 0 0 0 chr15 5103802 5103832 -98391142 + (T)n Simple_repeat Simple_repeat 1 30 0 2 623 1236 48 0 0 chr15 5103832 5103978 -98390996 - B1_Mus2 SINE Alu 0 147 2 2 623 511 265 58 12 chr15 5104142 5104314 -98390660 - B3A SINE B2 -18 180 1 2 623 203 333 74 8 chr15 5104567 5104688 -98390286 + MIRb SINE MIR 53 181 -87 2 623 23 0 0 0 chr15 5105732 5105755 -98389219 + AT_rich Low_complexity Low_complexity 1 23 0 2 623 675 37 0 0 chr15 5106059 5106141 -98388833 + (TG)n Simple_repeat Simple_repeat 1 82 0 2 623 624 233 0 0 chr15 5106640 5106812 -98388162 + (TG)n Simple_repeat Simple_repeat 2 173 0 2 623 423 216 0 0 chr15 5106845 5106956 -98388018 + (TG)n Simple_repeat Simple_repeat 2 112 0 2 623 393 267 29 0 chr15 5107165 5107270 -98387704 - RSINE1 SINE B4 -24 141 34 2 623 279 0 0 0 chr15 5107275 5107306 -98387668 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 623 475 236 0 0 chr15 5107306 5107413 -98387561 - B1F SINE Alu -12 108 2 2 623 629 217 185 26 chr15 5107413 5107602 -98387372 - ID_B1 SINE B4 -4 220 2 2 623 373 255 47 0 chr15 5107605 5107711 -98387263 - PB1D7 SINE Alu -1 119 9 2 623 2342 201 101 10 chr15 5107743 5108266 -98386708 - Lx5 LINE L1 -3 7047 6477 2 623 354 155 259 12 chr15 5108347 5108432 -98386542 - B1_Mur1 SINE Alu -29 120 15 2 623 385 174 0 0 chr15 5108426 5108495 -98386479 - B4 SINE B4 -62 230 162 2 623 183 80 0 0 chr15 5108637 5108662 -98386312 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 623 288 270 81 0 chr15 5108673 5108747 -98386227 - RSINE1 SINE B4 -15 150 71 2 623 341 302 101 0 chr15 5108900 5109029 -98385945 - ID_B1 SINE B4 -5 219 78 2 623 884 255 41 0 chr15 5109359 5109555 -98385419 - B3 SINE B2 -10 206 3 2 623 430 263 99 109 chr15 5109771 5110065 -98384909 - B4A SINE B4 0 292 2 2 624 230 215 29 58 chr15 5113313 5113382 -98381592 + BC1_Mm scRNA scRNA 38 104 -48 2 624 320 341 111 32 chr15 5114169 5114669 -98380305 + L2a LINE L2 2837 3426 0 2 624 518 200 99 8 chr15 5115124 5115245 -98379729 - B1_Mur2 SINE Alu -1 148 17 2 624 320 323 119 76 chr15 5115808 5116177 -98378797 - HAL1 LINE L1 -1307 1200 816 2 624 336 274 40 50 chr15 5117400 5117494 -98377480 + B3A SINE B2 71 164 -34 2 624 1431 50 0 0 chr15 5117494 5117674 -98377300 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 624 183 240 40 0 chr15 5118188 5118238 -98376736 + L2c LINE L2 3335 3386 -1 2 624 409 262 77 14 chr15 5118823 5118844 -98376130 - RSINE1 SINE B4 -13 152 128 2 624 423 0 0 0 chr15 5118844 5118891 -98376083 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 624 409 262 77 14 chr15 5118891 5119012 -98375962 - RSINE1 SINE B4 -38 127 3 2 624 26 0 0 0 chr15 5119211 5119237 -98375737 + AT_rich Low_complexity Low_complexity 1 26 0 2 624 2539 48 0 13 chr15 5119506 5119860 -98375114 - L1Md_F3 LINE L1 0 6584 6259 2 624 231 151 0 0 chr15 5119860 5119876 -98375098 + T-rich Low_complexity Low_complexity 2 17 0 2 624 3434 134 132 16 chr15 5120123 5120799 -98374175 - RMER6A LTR ERVK -2 754 1 2 624 678 287 12 12 chr15 5120856 5121025 -98373949 + B3A SINE B2 1 169 -29 2 624 324 0 0 0 chr15 5121029 5121065 -98373909 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 624 351 44 0 0 chr15 5121065 5121110 -98373864 + (TAA)n Simple_repeat Simple_repeat 1 45 0 2 624 492 174 0 0 chr15 5121854 5121946 -98373028 + CT-rich Low_complexity Low_complexity 2 93 0 2 624 251 265 14 14 chr15 5122228 5122297 -98372677 - B2_Mm2 SINE B2 -125 70 2 2 624 3286 80 0 11 chr15 5122310 5122754 -98372220 - L1Md_F2 LINE L1 -2 6580 6142 2 624 209 186 33 17 chr15 5122893 5122953 -98372021 + (CAAA)n Simple_repeat Simple_repeat 2 62 0 2 624 475 240 64 19 chr15 5123633 5123790 -98371184 + RSINE1 SINE B4 2 165 0 2 624 326 165 67 45 chr15 5123796 5123885 -98371089 + HAL1-3A_ME LINE L1 1975 2065 -793 2 624 252 0 0 0 chr15 5124477 5124505 -98370469 + (TCTG)n Simple_repeat Simple_repeat 1 28 0 2 624 461 168 122 70 chr15 5124507 5124622 -98370352 - B1_Mus1 SINE Alu -26 122 2 2 624 222 105 0 0 chr15 5124687 5124725 -98370249 + (TTTTTA)n Simple_repeat Simple_repeat 4 41 0 3 624 1238 48 0 0 chr15 5124725 5124872 -98370102 - B1_Mm SINE Alu 0 147 1 3 624 730 188 27 27 chr15 5125280 5125428 -98369546 + B1_Mur2 SINE Alu 1 148 -1 3 624 376 284 27 9 chr15 5125581 5125691 -98369283 + PB1D7 SINE Alu 2 113 -7 3 624 1011 155 11 39 chr15 5126110 5126291 -98368683 + B2_Mm2 SINE B2 1 176 -19 3 624 648 0 0 0 chr15 5127371 5127443 -98367531 + (TCCC)n Simple_repeat Simple_repeat 3 74 0 3 624 511 262 118 24 chr15 5127469 5127715 -98367259 - B4A SINE B4 -23 269 1 3 624 194 170 170 0 chr15 5128126 5128173 -98366801 + MIRm SINE MIR 96 150 -126 3 624 774 104 58 36 chr15 5128237 5128376 -98366598 - B1_Mur4 SINE Alu 0 150 9 3 624 270 260 18 88 chr15 5128283 5128397 -98366577 - MT2B LTR ERVL -344 257 152 3 624 309 283 47 9 chr15 5129770 5129877 -98365097 - L1ME2z LINE L1 -13 6431 6321 3 624 198 0 0 0 chr15 5129963 5129985 -98364989 + (TA)n Simple_repeat Simple_repeat 1 22 0 3 624 257 250 139 26 chr15 5132911 5132959 -98362015 - Charlie1a DNA MER1_type -831 624 572 3 624 427 318 108 0 chr15 5132959 5133107 -98361867 - RSINE1 SINE B4 0 165 2 3 624 257 250 139 26 chr15 5133107 5133173 -98361801 - Charlie1a DNA MER1_type -884 571 497 3 624 894 86 107 0 chr15 5133250 5133390 -98361584 + B2_Mm2 SINE B2 1 155 -40 3 624 261 0 0 0 chr15 5133390 5133419 -98361555 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 624 618 255 0 30 chr15 5133440 5133606 -98361368 - B3A SINE B2 -36 162 2 3 624 483 246 17 8 chr15 5133986 5134105 -98360869 - B3 SINE B2 -63 153 34 3 624 224 59 0 29 chr15 5134231 5134266 -98360708 + (TGGGGG)n Simple_repeat Simple_repeat 2 35 0 3 624 1934 131 83 49 chr15 5134309 5134694 -98360280 + RMER10B LTR ERVL 1 398 0 3 624 1191 211 216 17 chr15 5134948 5135295 -98359679 - MTD LTR MaLR -2 417 2 3 624 189 0 0 0 chr15 5135324 5135345 -98359629 + (C)n Simple_repeat Simple_repeat 1 21 0 3 624 632 192 0 19 chr15 5137703 5137857 -98357117 + (TA)n Simple_repeat Simple_repeat 1 151 0 3 624 406 252 86 36 chr15 5138644 5138784 -98356190 + B1F1 SINE Alu 1 147 -2 3 624 631 121 211 20 chr15 5139824 5139976 -98354998 - B2_Mm2 SINE B2 -14 181 1 3 624 2045 171 67 25 chr15 5140061 5140463 -98354511 - MTD LTR MaLR 0 419 1 3 624 235 221 102 23 chr15 5140626 5140714 -98354260 - PB1D10 SINE Alu 0 117 23 3 624 192 40 0 0 chr15 5140995 5141020 -98353954 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 3 624 297 323 36 0 chr15 5141037 5141145 -98353829 - PB1D7 SINE Alu -4 113 1 3 624 377 286 165 0 chr15 5141145 5141202 -98353772 - ID SINE ID -143 81 3 3 624 289 342 57 25 chr15 5141592 5141751 -98353223 - Lx8 LINE L1 -125 7348 7185 3 624 459 209 145 65 chr15 5141766 5141904 -98353070 - B1_Mur3 SINE Alu 0 149 1 3 624 275 286 0 0 chr15 5141933 5142003 -98352971 - B1F SINE Alu -64 85 16 3 624 1484 50 28 0 chr15 5142094 5142275 -98352699 + B2_Mm2 SINE B2 1 186 -9 3 624 241 286 0 0 chr15 5142945 5143008 -98351966 + (TG)n Simple_repeat Simple_repeat 1 63 0 3 624 213 175 0 0 chr15 5143216 5143256 -98351718 + CT-rich Low_complexity Low_complexity 3 42 0 3 624 290 304 77 55 chr15 5143642 5143823 -98351151 + MIR SINE MIR 11 195 -67 3 624 219 224 60 0 chr15 5144365 5144432 -98350542 + L2 LINE L2 1649 1719 -1700 3 624 206 292 146 20 chr15 5144505 5144704 -98350270 + L2 LINE L2 2363 2586 -833 3 624 261 243 0 28 chr15 5146652 5146724 -98348250 + MER34B-int LTR ERV1 1435 1504 -3852 3 624 324 306 9 9 chr15 5147142 5147254 -98347720 + Cheshire DNA MER1_type 166 277 -2143 3 624 229 314 14 0 chr15 5147383 5147453 -98347521 + CT-rich Low_complexity Low_complexity 2 72 0 3 624 306 0 0 0 chr15 5147729 5147763 -98347211 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 624 446 155 51 10 chr15 5147840 5147938 -98347036 + B1_Mur2 SINE Alu 44 145 -4 3 624 563 274 14 7 chr15 5149516 5149663 -98345311 - RSINE1 SINE B4 -13 152 5 3 624 1243 20 7 0 chr15 5149823 5149969 -98345005 + B1_Mus2 SINE Alu 1 147 0 3 624 3463 169 79 13 chr15 5150049 5150622 -98344352 + RMER1B Other Other 330 935 -131 3 624 297 0 0 0 chr15 5150622 5150655 -98344319 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 624 3463 169 79 13 chr15 5150655 5150754 -98344220 + RMER1B Other Other 936 1045 -21 3 624 975 161 112 29 chr15 5150986 5151191 -98343783 + URR1A DNA MER1_type 5 226 0 3 624 1303 153 140 14 chr15 5151506 5151785 -98343189 - ORR1A4 LTR MaLR 0 329 16 3 624 402 325 65 9 chr15 5152068 5152282 -98342692 - MER82 DNA MER2_type -99 554 329 3 624 269 246 16 0 chr15 5152363 5152424 -98342550 - B4A SINE B4 -222 70 9 3 624 452 335 17 34 chr15 5153327 5153506 -98341468 - L2a LINE L2 -332 3094 2919 3 624 916 202 64 20 chr15 5153522 5153724 -98341250 - ORR1C2 LTR MaLR -5 379 169 3 624 255 61 0 0 chr15 5153727 5153760 -98341214 + (GGGA)n Simple_repeat Simple_repeat 1 33 0 3 624 736 148 5 172 chr15 5153761 5153965 -98341009 - ORR1C2 LTR MaLR -199 185 16 3 624 271 288 114 0 chr15 5154591 5154723 -98340251 + Lx8 LINE L1 7252 7398 -75 3 624 663 204 29 14 chr15 5154960 5155099 -98339875 + B1F1 SINE Alu 1 141 -8 3 624 458 131 24 0 chr15 5155217 5155301 -98339673 + B1_Mus2 SINE Alu 62 147 0 3 624 483 264 56 12 chr15 5155427 5155588 -98339386 - B4A SINE B4 -124 168 1 3 624 223 316 81 69 chr15 5155802 5155962 -98339012 + MIR SINE MIR 23 184 -78 3 624 682 292 69 11 chr15 5156323 5156583 -98338391 + B4A SINE B4 6 280 -12 3 624 876 252 29 56 chr15 5157027 5157400 -98337574 - ORR1E LTR MaLR 0 379 2 3 624 1141 207 183 12 chr15 5157499 5157827 -98337147 - MTC LTR MaLR -36 385 2 3 624 333 258 105 32 chr15 5158014 5158138 -98336836 - RSINE1 SINE B4 -31 134 2 3 624 250 265 69 30 chr15 5161023 5161124 -98333850 + PB1D10 SINE Alu 5 109 -8 3 624 698 270 99 18 chr15 5162371 5162492 -98332482 - L1MA5 LINE L1 -376 5924 5792 3 624 495 48 0 0 chr15 5162492 5162554 -98332420 + (TA)n Simple_repeat Simple_repeat 1 62 0 3 624 698 270 99 18 chr15 5162554 5162715 -98332259 - L1MA5 LINE L1 -509 5791 5621 3 624 302 272 53 0 chr15 5162779 5162889 -98332085 - L1MA5 LINE L1 -851 5449 5328 3 624 4009 282 72 4 chr15 5162884 5164139 -98330835 - Lx9 LINE L1 -5 7639 6300 3 624 1544 195 34 12 chr15 5164882 5165204 -98329770 - Lx4A LINE L1 -47 7011 6683 3 624 5692 114 23 35 chr15 5165202 5165576 -98329398 - Lx4A LINE L1 -583 6475 6097 3 624 3414 35 5 0 chr15 5165576 5165970 -98329004 - MTA_Mm LTR MaLR 0 396 1 3 624 5692 116 22 25 chr15 5165970 5166729 -98328245 - Lx4A LINE L1 -962 6096 5342 3 624 249 183 73 16 chr15 5166724 5166826 -98328148 - L1MA5 LINE L1 -2182 3958 3851 3 624 344 202 83 0 chr15 5168462 5168546 -98326428 - PB1D7 SINE Alu -21 99 9 3 624 661 172 0 17 chr15 5168784 5168902 -98326072 + PB1D10 SINE Alu 2 117 0 3 624 410 194 0 86 chr15 5169021 5169173 -98325801 + (CATATA)n Simple_repeat Simple_repeat 2 140 0 3 624 570 273 172 34 chr15 5171921 5172479 -98322495 - L1ME2 LINE L1 -122 6042 5408 3 624 189 0 0 0 chr15 5173251 5173272 -98321702 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 3 624 752 263 103 31 chr15 5173307 5173656 -98321318 - L1ME2 LINE L1 -2309 3837 3464 3 624 1856 120 54 38 chr15 5173814 5174127 -98320847 - Lx2 LINE L1 -15 6982 6665 3 624 4677 183 88 33 chr15 5174131 5174263 -98320711 - Lx9 LINE L1 -8 7636 7481 3 624 396 125 0 0 chr15 5174263 5174327 -98320647 + (CA)n Simple_repeat Simple_repeat 1 64 0 3 624 4677 183 88 33 chr15 5174327 5174629 -98320345 - Lx9 LINE L1 -164 7480 7160 3 624 885 155 218 0 chr15 5174629 5174803 -98320171 - B3 SINE B2 0 216 5 3 624 4677 183 88 33 chr15 5174803 5175430 -98319544 - Lx9 LINE L1 -485 7159 6516 3 624 4956 14 0 0 chr15 5175551 5176105 -98318869 + L1Md_T LINE L1 5033 5586 -297 3 624 8672 30 0 0 chr15 5176105 5177101 -98317873 + L1Md_T LINE L1 5587 6582 0 3 624 1276 191 116 0 chr15 5177248 5177577 -98317397 - MTEb LTR MaLR -9 370 4 3 624 189 107 0 0 chr15 5177750 5177778 -98317196 + (T)n Simple_repeat Simple_repeat 1 28 0 3 624 478 50 48 39 chr15 5178058 5178161 -98316813 + (TCTCTG)n Simple_repeat Simple_repeat 4 107 0 3 624 312 264 31 23 chr15 5178161 5178289 -98316685 - L1MA9 LINE L1 -348 5964 5836 3 624 243 260 37 49 chr15 5178416 5178497 -98316477 - L1_Mur2 LINE L1 -305 5572 5493 3 624 243 152 0 0 chr15 5179137 5179183 -98315791 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 3 624 673 292 93 69 chr15 5180000 5180333 -98314641 + MLT1B LTR MaLR 13 354 -36 3 624 3043 42 5 5 chr15 5180333 5180716 -98314258 - L1Md_F2 LINE L1 0 6582 6200 3 624 673 292 93 69 chr15 5180716 5180746 -98314228 + MLT1B LTR MaLR 355 385 -5 3 624 2385 89 176 9 chr15 5180854 5181274 -98313700 + RLTR44C LTR ERVK 1 490 -12 3 624 1243 294 113 18 chr15 5181274 5181949 -98313025 + L1MB7 LINE L1 5396 6144 -40 3 624 283 167 0 49 chr15 5182482 5182564 -98312410 + G-rich Low_complexity Low_complexity 3 80 0 3 624 22 70 0 0 chr15 5182766 5182809 -98312165 + AT_rich Low_complexity Low_complexity 1 43 0 3 624 21 36 0 0 chr15 5184034 5184062 -98310912 + AT_rich Low_complexity Low_complexity 1 28 0 3 624 32 57 0 0 chr15 5186203 5186256 -98308718 + AT_rich Low_complexity Low_complexity 1 53 0 3 624 312 27 0 0 chr15 5186779 5186816 -98308158 + (TTTTG)n Simple_repeat Simple_repeat 5 41 0 3 624 318 148 0 0 chr15 5187135 5187189 -98307785 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 624 186 43 0 0 chr15 5187762 5187785 -98307189 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 624 504 218 0 0 chr15 5187785 5187895 -98307079 - PB1D9 SINE Alu -10 110 1 3 624 24 0 0 0 chr15 5189154 5189178 -98305796 + AT_rich Low_complexity Low_complexity 1 24 0 3 624 1308 42 0 0 chr15 5195406 5195571 -98299403 + B2_Mm2 SINE B2 1 165 -30 3 624 421 283 38 0 chr15 5196370 5196476 -98298498 + PB1D10 SINE Alu 5 114 -3 3 624 1209 62 0 0 chr15 5196686 5196832 -98298142 - B1_Mm SINE Alu 0 147 2 4 624 964 235 9 27 chr15 5196916 5197135 -98297839 - B3 SINE B2 0 216 2 4 624 258 295 115 0 chr15 5197193 5197271 -98297703 + 5S rRNA rRNA 2 88 -33 4 624 25 0 0 0 chr15 5197772 5197797 -98297177 + AT_rich Low_complexity Low_complexity 1 25 0 4 624 430 328 47 21 chr15 5197798 5197988 -98296986 - B3A SINE B2 -1 197 3 4 624 308 247 39 0 chr15 5198673 5198750 -98296224 - Lx9 LINE L1 -1103 6541 6462 4 624 1027 58 0 0 chr15 5198754 5198891 -98296083 - B1_Mm SINE Alu 0 147 11 4 624 454 188 0 86 chr15 5198798 5198903 -98296071 - MT2B LTR ERVL -343 258 163 4 624 536 233 45 58 chr15 5198903 5199058 -98295916 - Lx9 LINE L1 -1193 6451 6299 4 624 640 248 31 0 chr15 5199041 5199202 -98295772 + Lx9 LINE L1 7224 7389 -255 4 624 521 308 27 62 chr15 5199467 5199786 -98295188 - RLTR26 LTR ERVK -225 417 68 4 624 1508 62 5 5 chr15 5199808 5200001 -98294973 + B2_Mm1t SINE B2 1 193 0 4 624 449 188 194 0 chr15 5200029 5200084 -98294890 + Lx9 LINE L1 7447 7514 -130 4 624 420 20 0 0 chr15 5200084 5200133 -98294841 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 624 449 188 194 0 chr15 5200133 5200242 -98294732 + Lx9 LINE L1 7515 7642 -2 4 624 249 262 16 0 chr15 5200496 5200557 -98294417 + ID4 SINE ID 4 65 -18 4 624 669 109 0 9 chr15 5201199 5201310 -98293664 - Lx LINE L1 0 6654 6545 4 624 198 0 0 0 chr15 5201314 5201336 -98293638 + (T)n Simple_repeat Simple_repeat 1 22 0 4 624 581 324 168 17 chr15 5202061 5202353 -98292621 - Lx8 LINE L1 -295 7178 6843 4 624 533 294 66 28 chr15 5203562 5203744 -98291230 - ID_B1 SINE B4 -31 193 5 4 624 28 29 0 0 chr15 5204118 5204153 -98290821 + AT_rich Low_complexity Low_complexity 1 35 0 4 624 539 277 11 62 chr15 5204172 5204349 -98290625 - B3A SINE B2 -16 182 15 4 624 193 250 13 13 chr15 5206271 5206348 -98288626 + CT-rich Low_complexity Low_complexity 1 77 0 4 624 340 164 41 154 chr15 5207030 5207099 -98287875 - Lx9 LINE L1 0 7644 7576 4 624 2367 142 13 23 chr15 5207099 5207494 -98287480 - ORR1B1 LTR MaLR 0 394 4 4 624 877 161 97 46 chr15 5207494 5207749 -98287225 - Lx9 LINE L1 -69 7575 7134 4 624 2367 158 35 10 chr15 5207839 5208243 -98286731 - MTC LTR MaLR -3 418 5 4 624 910 248 96 136 chr15 5208457 5208831 -98286143 + ORR1E LTR MaLR 1 359 0 4 624 763 277 65 74 chr15 5209303 5209573 -98285401 + MTE2a LTR MaLR 23 284 -95 4 624 990 164 118 15 chr15 5209573 5209777 -98285197 - URR1A DNA MER1_type -1 225 1 4 624 763 277 65 74 chr15 5209777 5209857 -98285117 + MTE2a LTR MaLR 285 370 -9 4 624 351 0 0 0 chr15 5209982 5210021 -98284953 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 624 726 249 53 30 chr15 5210704 5211067 -98283907 + MTD LTR MaLR 1 405 -14 4 624 429 269 11 0 chr15 5211383 5211476 -98283498 + Lx8 LINE L1 7265 7358 -115 4 624 198 68 0 83 chr15 5211479 5211527 -98283447 + A-rich Low_complexity Low_complexity 2 45 0 4 624 280 257 35 7 chr15 5211528 5211560 -98283414 + ORR1B1-int LTR MaLR 605 640 -869 4 624 828 158 0 40 chr15 5211560 5211712 -98283262 + B1_Mus1 SINE Alu 1 146 -2 4 624 226 216 38 63 chr15 5211744 5211823 -98283151 + Lx8 LINE L1 7394 7470 -3 4 624 211 108 0 75 chr15 5211859 5211899 -98283075 + (CAAAG)n Simple_repeat Simple_repeat 2 38 0 4 624 267 345 26 0 chr15 5211924 5212037 -98282937 - L1MA10 LINE L1 -38 6296 6181 4 624 1234 264 174 30 chr15 5212076 5212645 -98282329 - Lx8 LINE L1 -2 7471 6821 4 624 310 289 0 0 chr15 5212898 5212988 -98281986 - MLT1B LTR MaLR -5 385 296 4 624 26 0 0 0 chr15 5213705 5213731 -98281243 + AT_rich Low_complexity Low_complexity 1 26 0 4 624 22 35 0 0 chr15 5213847 5213876 -98281098 + AT_rich Low_complexity Low_complexity 1 29 0 4 624 465 19 0 0 chr15 5213989 5214043 -98280931 + (TCCC)n Simple_repeat Simple_repeat 1 54 0 4 624 606 39 0 0 chr15 5214043 5214120 -98280854 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 4 624 336 323 36 6 chr15 5214432 5214600 -98280374 + MIR SINE MIR 44 216 -46 4 624 240 222 16 0 chr15 5215344 5215407 -98279567 - Lx7 LINE L1 0 7696 7633 4 624 288 77 0 0 chr15 5215431 5215470 -98279504 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 624 318 206 0 0 chr15 5215529 5215597 -98279377 + (CA)n Simple_repeat Simple_repeat 2 69 0 4 624 707 249 71 9 chr15 5215597 5215808 -98279166 - Lx7 LINE L1 -253 7443 7220 4 624 682 168 80 87 chr15 5216340 5216490 -98278484 + B1_Mur4 SINE Alu 2 150 0 4 624 185 0 40 0 chr15 5216594 5216619 -98278355 + (TTA)n Simple_repeat Simple_repeat 3 28 0 4 624 10303 17 2 1 chr15 5216858 5218336 -98276638 + L1Md_Gf LINE L1 1 1142 -5380 4 624 11092 23 0 0 chr15 5221332 5222686 -98272288 + L1Md_T LINE L1 4233 5586 -297 4 624 9034 5 0 0 chr15 5222686 5223682 -98271292 + L1Md_T LINE L1 5587 6582 0 4 624 22 0 0 0 chr15 5223696 5223718 -98271256 + AT_rich Low_complexity Low_complexity 1 22 0 4 624 1281 48 0 0 chr15 5225080 5225246 -98269728 - L1Md_A LINE L1 -478 6104 5939 4 624 4143 29 0 2 chr15 5225246 5225733 -98269241 + L1Md_A LINE L1 6095 6580 -2 4 624 1117 114 10 66 chr15 5225798 5225996 -98268978 - B2_Mm2 SINE B2 -6 189 3 4 624 595 110 140 0 chr15 5226863 5226963 -98268011 - URR1B DNA MER1_type -2 223 110 4 624 2363 184 79 54 chr15 5226960 5227553 -98267421 - RMER6C LTR ERVK -82 608 1 4 624 199 341 88 0 chr15 5227854 5227945 -98267029 + L2c LINE L2 3275 3373 -14 4 624 318 26 0 0 chr15 5227952 5227991 -98266983 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 624 414 0 0 0 chr15 5228114 5228160 -98266814 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 624 276 244 49 37 chr15 5228171 5228252 -98266722 - MIRb SINE MIR -62 206 125 4 624 200 270 61 45 chr15 5228928 5228994 -98265980 - MIR3 SINE MIR -47 161 95 4 624 432 0 0 0 chr15 5229439 5229487 -98265487 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 624 984 129 0 0 chr15 5229610 5229892 -98265082 + (TG)n Simple_repeat Simple_repeat 1 282 0 4 624 1211 35 14 0 chr15 5231688 5231832 -98263142 - B1_Mm SINE Alu 0 147 2 4 624 211 257 157 0 chr15 5232306 5232376 -98262598 - ID2 SINE ID -1 82 2 4 624 195 162 0 0 chr15 5232390 5232427 -98262547 + CT-rich Low_complexity Low_complexity 1 37 0 4 624 1209 73 0 17 chr15 5232427 5232608 -98262366 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 4 624 303 28 0 0 chr15 5232610 5232646 -98262328 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 4 624 4600 176 36 12 chr15 5232652 5233545 -98261429 - Lx3C LINE L1 -2 6974 6061 4 624 370 274 58 19 chr15 5233814 5234022 -98260952 - L1MA6 LINE L1 -110 6190 5975 4 624 21 36 0 0 chr15 5234195 5234223 -98260751 + AT_rich Low_complexity Low_complexity 1 28 0 4 624 764 241 0 0 chr15 5234225 5234366 -98260608 - B3 SINE B2 -67 149 9 4 624 9551 3 1 0 chr15 5234368 5236180 -98258794 - L1Md_A LINE L1 0 6582 4770 4 624 387 260 31 20 chr15 5236270 5236368 -98258606 - B3 SINE B2 -25 191 93 4 624 608 262 5 35 chr15 5237671 5237819 -98257155 + B3A SINE B2 1 148 -47 4 624 396 0 0 0 chr15 5237819 5237863 -98257111 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 624 398 286 62 87 chr15 5237863 5237909 -98257065 + B2_Mm2 SINE B2 149 190 -5 4 624 193 232 40 80 chr15 5238161 5238236 -98256738 - L2c LINE L2 -1 3386 3315 4 624 189 94 0 0 chr15 5238892 5238924 -98256050 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 4 624 4140 194 64 12 chr15 5239040 5240005 -98254969 - Lx3C LINE L1 -4 6972 5958 4 624 440 207 94 88 chr15 5240835 5240994 -98253980 - RSINE1 SINE B4 -2 163 4 4 624 204 111 73 18 chr15 5241939 5241994 -98252980 + T-rich Low_complexity Low_complexity 4 61 0 4 624 197 321 69 69 chr15 5242183 5242270 -98252704 + MER5B DNA MER1_type 18 104 -74 4 625 232 251 170 96 chr15 5243013 5243242 -98251732 + RLTR12B LTR ERVK 241 486 -42 4 625 184 111 44 0 chr15 5243939 5243984 -98250990 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 4 625 227 279 0 0 chr15 5245078 5245146 -98249828 + T-rich Low_complexity Low_complexity 1 68 0 4 625 2669 206 90 110 chr15 5245748 5246726 -98248248 - RMER17B LTR ERVK 0 958 1 4 625 231 217 0 0 chr15 5246899 5246945 -98248029 + CT-rich Low_complexity Low_complexity 2 47 0 4 625 970 236 39 0 chr15 5246951 5247154 -98247820 - B3 SINE B2 0 216 6 4 625 1717 239 59 8 chr15 5247199 5247587 -98247387 - MTD LTR MaLR 0 419 12 4 625 1708 281 76 0 chr15 5247936 5248452 -98246522 + Lx9 LINE L1 6300 6854 -790 4 625 785 343 24 28 chr15 5248917 5249169 -98245805 + B4 SINE B4 2 252 -40 4 625 423 0 0 0 chr15 5249205 5249252 -98245722 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 625 272 318 52 52 chr15 5251316 5251432 -98243542 - PB1D10 SINE Alu 0 117 2 4 625 601 231 0 0 chr15 5251460 5251577 -98243397 + ID_B1 SINE B4 95 211 -13 4 625 396 0 0 0 chr15 5252106 5252150 -98242824 + (TTTTG)n Simple_repeat Simple_repeat 4 47 0 4 625 251 288 204 18 chr15 5252278 5252391 -98242583 - MLT1H LTR MaLR 0 489 356 4 625 21 0 0 0 chr15 5252532 5252553 -98242421 + AT_rich Low_complexity Low_complexity 1 21 0 4 625 317 347 13 48 chr15 5252573 5252773 -98242201 - MLT1H LTR MaLR -312 237 1 4 625 769 19 38 0 chr15 5253601 5253706 -98241268 + (TCTA)n Simple_repeat Simple_repeat 2 110 0 4 625 762 194 0 19 chr15 5253706 5253864 -98241110 + B2_Mm2 SINE B2 19 173 -22 4 625 546 175 158 0 chr15 5254428 5254542 -98240432 - MTC LTR MaLR -52 369 238 4 625 181 242 0 0 chr15 5255413 5255446 -98239528 - L2 LINE L2 -2918 501 469 4 625 220 211 19 0 chr15 5256038 5256090 -98238884 + GA-rich Low_complexity Low_complexity 2 54 0 4 625 298 172 0 59 chr15 5256180 5256248 -98238726 + MLT1A LTR MaLR 5 68 -306 4 625 313 328 164 46 chr15 5256555 5256884 -98238090 + L2 LINE L2 2558 2925 -494 5 625 222 349 9 45 chr15 5257548 5257659 -98237315 + B1F1 SINE Alu 36 142 -7 5 625 1735 222 87 3 chr15 5258202 5258582 -98236392 + MTD LTR MaLR 1 412 -7 5 625 783 241 132 64 chr15 5259225 5259505 -98235469 - ORR1D2 LTR MaLR -67 303 5 5 625 3120 276 39 84 chr15 5259509 5260606 -98234368 - ORR1D2-int LTR MaLR 0 1370 323 5 625 585 0 0 0 chr15 5261139 5261204 -98233770 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 5 625 528 296 47 12 chr15 5261204 5261375 -98233599 - ORR1D2 LTR MaLR -182 177 1 5 625 818 308 43 57 chr15 5261905 5262187 -98232787 - ORR1D2-int LTR MaLR -1078 292 15 5 625 243 243 49 56 chr15 5262195 5262316 -98232658 - ORR1D2 LTR MaLR -3 367 244 5 625 3956 32 0 0 chr15 5263046 5263508 -98231466 + L1Md_T LINE L1 6119 6580 -2 5 625 222 37 0 0 chr15 5263744 5263771 -98231203 + (A)n Simple_repeat Simple_repeat 1 27 0 5 625 1428 110 13 13 chr15 5263771 5264002 -98230972 + L1_Mus3 LINE L1 6408 6638 0 5 625 1293 66 11 5 chr15 5264058 5264242 -98230732 - L1_Mus3 LINE L1 -2 6636 6452 5 625 23 0 0 0 chr15 5264375 5264398 -98230576 + AT_rich Low_complexity Low_complexity 1 23 0 5 625 402 39 0 0 chr15 5264666 5264718 -98230256 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 625 283 304 135 42 chr15 5264838 5265075 -98229899 - MIR SINE MIR 0 262 4 5 625 563 296 0 36 chr15 5265112 5265252 -98229722 + RSINE1 SINE B4 2 136 -29 5 625 483 371 58 6 chr15 5266182 5266494 -98228480 + L2 LINE L2 708 1035 -2384 5 625 234 180 32 16 chr15 5266547 5266609 -98228365 + T-rich Low_complexity Low_complexity 2 64 0 5 625 612 0 0 0 chr15 5266616 5266684 -98228290 + (TTCC)n Simple_repeat Simple_repeat 1 68 0 5 625 8980 150 36 12 chr15 5266684 5268420 -98226554 - Lx5 LINE L1 -16 7034 5231 5 625 441 0 0 0 chr15 5268420 5268469 -98226505 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 625 8980 144 36 9 chr15 5268469 5269548 -98225426 - Lx5 LINE L1 -647 5230 4135 5 625 1655 173 110 18 chr15 5269573 5269606 -98225368 - RMER6-int LTR ERVK -216 2961 2928 5 625 321 26 0 0 chr15 5269606 5269644 -98225330 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 625 1655 173 110 18 chr15 5269644 5270011 -98224963 - RMER6-int LTR ERVK -250 2927 2525 5 625 1368 103 37 41 chr15 5270023 5270266 -98224708 - RMER6-int LTR ERVK -2549 628 387 5 625 201 74 0 0 chr15 5270266 5270293 -98224681 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 5 625 1099 85 7 0 chr15 5270296 5270437 -98224537 - B1_Mus1 SINE Alu -2 146 5 5 625 1806 184 10 50 chr15 5270464 5270865 -98224109 - RMER6-int LTR ERVK -2787 390 6 5 625 3519 150 75 46 chr15 5270892 5271627 -98223347 - RMER6A LTR ERVK 0 756 1 5 625 224 220 26 35 chr15 5271643 5271756 -98223218 + (TATAA)n Simple_repeat Simple_repeat 4 115 0 5 625 363 245 167 0 chr15 5271763 5271865 -98223109 - MT2A LTR ERVL -69 464 346 5 625 468 187 22 0 chr15 5271856 5271947 -98223027 - MT2A LTR ERVL -437 96 4 5 625 689 285 140 7 chr15 5271954 5272360 -98222614 - L1MA8 LINE L1 -363 5928 5469 5 625 1378 301 86 22 chr15 5272363 5273305 -98221669 - L1MA8 LINE L1 -950 5193 4192 5 625 900 295 46 63 chr15 5273306 5273831 -98221143 + Lx9 LINE L1 6954 7469 -175 5 625 297 0 0 0 chr15 5273864 5273897 -98221077 + (GA)n Simple_repeat Simple_repeat 1 33 0 5 625 1298 299 73 35 chr15 5273974 5274686 -98220288 - L1MA8 LINE L1 -1914 4229 3502 5 625 884 296 52 41 chr15 5274686 5275052 -98219922 + ORR1D2 LTR MaLR 1 370 0 5 625 1298 299 73 35 chr15 5275052 5275444 -98219530 - L1MA8 LINE L1 -2642 3501 3083 5 625 1397 303 15 25 chr15 5275666 5276211 -98218763 - Lx9 LINE L1 -272 7372 6779 5 625 262 175 0 60 chr15 5276338 5276405 -98218569 - Lx2 LINE L1 -739 6258 6196 5 625 276 256 49 0 chr15 5276634 5276716 -98218258 + L1MC1 LINE L1 6108 6193 -140 5 625 295 367 27 18 chr15 5276721 5276832 -98218142 + PB1D10 SINE Alu 3 114 -3 5 625 336 275 104 30 chr15 5276858 5276993 -98217981 + L1MC1 LINE L1 6189 6333 0 5 625 806 301 26 61 chr15 5277124 5277435 -98217539 - L3 LINE CR1 -137 4352 4053 5 625 1770 161 158 21 chr15 5277784 5278202 -98216772 - Lx9 LINE L1 -9 7635 7161 5 625 1112 288 98 20 chr15 5278272 5278885 -98216089 + L1MA5 LINE L1 3122 3782 -2361 5 625 3102 213 70 15 chr15 5278887 5279544 -98215430 + Lx6 LINE L1 6768 7460 0 5 625 553 258 30 43 chr15 5279542 5279777 -98215197 + L1MA5 LINE L1 3769 4000 -2140 5 625 360 94 0 0 chr15 5280296 5280349 -98214625 + (CTATA)n Simple_repeat Simple_repeat 3 55 0 5 625 242 311 42 56 chr15 5280363 5280506 -98214468 + L1_Mur3 LINE L1 3994 4134 -1746 5 625 247 259 35 12 chr15 5281566 5281652 -98213322 + L1MA5 LINE L1 4320 4407 -1736 5 625 866 300 140 32 chr15 5281872 5282107 -98212867 + L1MA5 LINE L1 5102 5406 -894 5 625 5445 83 24 0 chr15 5282107 5282816 -98212158 - L1_Mus3 LINE L1 -1 6637 5912 5 625 866 298 138 26 chr15 5282816 5283266 -98211708 + L1MA5 LINE L1 5407 5924 -376 5 625 802 295 128 41 chr15 5283569 5284249 -98210725 + L1M2 LINE L1 4606 5368 -775 5 625 785 58 0 0 chr15 5284249 5284353 -98210621 - L1_Mus1 LINE L1 0 6567 6464 5 625 708 328 126 45 chr15 5284353 5284768 -98210206 + L1M2 LINE L1 5337 5790 -57 5 625 216 209 23 0 chr15 5284939 5284982 -98209992 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 625 764 300 20 51 chr15 5285014 5285267 -98209707 - B4A SINE B4 -13 279 35 5 625 214 278 111 0 chr15 5285644 5285716 -98209258 - ID2 SINE ID -3 80 1 5 625 237 259 0 0 chr15 5286948 5287006 -98207968 - BLACKJACK DNA AcHobo -2886 58 1 5 625 8248 49 7 3 chr15 5287184 5288852 -98206122 - L1Md_F2 LINE L1 -3 6579 4904 5 625 252 217 11 21 chr15 5288940 5289034 -98205940 + (TG)n Simple_repeat Simple_repeat 1 93 0 5 625 318 315 134 40 chr15 5289036 5289185 -98205789 - RSINE1 SINE B4 0 165 3 5 625 318 302 38 76 chr15 5289201 5289463 -98205511 + L1MA6 LINE L1 5768 6019 -281 5 625 302 289 12 0 chr15 5290542 5290625 -98204349 - B1_Mur2 SINE Alu -5 144 61 5 625 1808 219 39 3 chr15 5290653 5291037 -98203937 + Lx6 LINE L1 7037 7434 -26 5 625 468 206 43 5 chr15 5291147 5291255 -98203719 + Lx6 LINE L1 6812 6890 -570 5 625 305 287 157 37 chr15 5291265 5291399 -98203575 + HAL1-3A_ME LINE L1 2287 2436 -422 5 625 272 131 28 28 chr15 5291400 5291471 -98203503 + GA-rich Low_complexity Low_complexity 1 71 0 5 625 225 0 0 0 chr15 5291677 5291702 -98203272 + (TCTCTG)n Simple_repeat Simple_repeat 6 30 0 5 625 620 311 24 12 chr15 5291776 5291945 -98203029 - B4A SINE B4 -20 272 102 5 625 1516 38 55 0 chr15 5291950 5292133 -98202841 + L1Md_F2 LINE L1 5393 5585 -298 5 625 8048 69 9 4 chr15 5292134 5293111 -98201863 + L1Md_F2 LINE L1 5587 6568 -14 5 625 943 59 0 0 chr15 5293126 5293245 -98201729 + B2_Mm2 SINE B2 2 120 -75 5 625 480 18 0 0 chr15 5293267 5293324 -98201650 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 625 362 255 64 0 chr15 5293332 5293426 -98201548 - B4 SINE B4 -191 101 2 5 625 1199 61 0 20 chr15 5294302 5294453 -98200521 - B1_Mus1 SINE Alu 0 148 1 5 625 4837 109 7 31 chr15 5295367 5296070 -98198904 + Lx2A LINE L1 6322 7007 -1 5 625 623 268 40 85 chr15 5296670 5296696 -98198278 - B3 SINE B2 -25 191 167 5 625 255 79 0 0 chr15 5296696 5296734 -98198240 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 625 623 268 40 85 chr15 5296734 5296907 -98198067 - B3 SINE B2 -50 166 1 5 625 1214 43 0 0 chr15 5298449 5298587 -98196387 + B1_Mus1 SINE Alu 3 140 -8 5 625 234 0 0 0 chr15 5298588 5298614 -98196360 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 5 625 238 269 38 13 chr15 5299981 5300060 -98194914 - Charlie22a DNA MER1_type -8 483 403 5 625 22 0 0 0 chr15 5301174 5301196 -98193778 + AT_rich Low_complexity Low_complexity 1 22 0 5 625 393 317 0 0 chr15 5301383 5301465 -98193509 + PB1D10 SINE Alu 7 88 -29 5 625 237 333 10 94 chr15 5301465 5301479 -98193495 + MT2B2 LTR ERVL 171 258 -326 5 625 3204 76 8 2 chr15 5301616 5302014 -98192960 - MTB LTR MaLR 0 400 1 5 625 207 0 0 0 chr15 5302177 5302200 -98192774 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 5 625 6419 101 89 25 chr15 5302212 5303216 -98191758 - Lx LINE L1 0 6654 5587 5 625 209 378 0 0 chr15 5303665 5303739 -98191235 + (CACG)n Simple_repeat Simple_repeat 2 75 0 5 625 2535 44 17 3 chr15 5304934 5305230 -98189744 - L1_Mus1 LINE L1 -6 6561 6262 5 625 579 29 0 0 chr15 5305288 5305357 -98189617 + (GA)n Simple_repeat Simple_repeat 1 69 0 5 625 26 30 0 0 chr15 5305994 5306027 -98188947 + AT_rich Low_complexity Low_complexity 1 33 0 5 625 3370 92 106 61 chr15 5306060 5306975 -98187999 - Lx3A LINE L1 -317 6664 5614 5 625 274 266 0 114 chr15 5306975 5307032 -98187942 + RMER12 LTR ERVK 737 783 -539 5 625 474 18 0 0 chr15 5307032 5307087 -98187887 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 625 274 266 0 114 chr15 5307087 5307152 -98187822 + RMER12 LTR ERVK 784 845 -477 5 625 3127 83 78 187 chr15 5307152 5307481 -98187493 - Lx3A LINE L1 -273 5613 5269 5 625 219 161 0 0 chr15 5307481 5307537 -98187437 + T-rich Low_complexity Low_complexity 1 56 0 5 625 2294 51 102 3 chr15 5307537 5307850 -98187124 - MTA_Mm LTR MaLR -52 344 1 5 625 927 51 22 0 chr15 5307850 5307987 -98186987 - MTA_Mm-int LTR MaLR 0 1098 959 5 625 1794 55 12 8 chr15 5307997 5308237 -98186737 + RLTR13C2 LTR ERVK 55 295 -513 5 625 3433 59 11 2 chr15 5308237 5308676 -98186298 - L1_Mur1 LINE L1 -617 5269 4827 5 625 190 102 82 0 chr15 5309235 5309284 -98185690 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 5 625 603 167 23 29 chr15 5309289 5309462 -98185512 + GA-rich Low_complexity Low_complexity 5 176 0 5 625 711 191 30 30 chr15 5309638 5309773 -98185201 + B1_Mus2 SINE Alu 3 137 -10 5 625 257 0 0 29 chr15 5309774 5309808 -98185166 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 5 625 27 0 0 0 chr15 5310158 5310185 -98184789 + AT_rich Low_complexity Low_complexity 1 27 0 5 625 568 310 64 12 chr15 5310193 5310230 -98184744 - B3A SINE B2 -16 182 144 5 625 360 0 0 0 chr15 5310230 5310270 -98184704 + (GGA)n Simple_repeat Simple_repeat 1 40 0 5 625 568 310 64 12 chr15 5310270 5310405 -98184569 - B3A SINE B2 -55 143 1 5 625 1400 224 44 78 chr15 5311242 5311625 -98183349 + ORR1D2 LTR MaLR 1 370 0 5 625 2044 220 29 34 chr15 5311695 5312171 -98182803 - RMER19C LTR ERVK 0 611 138 5 625 374 276 51 14 chr15 5312534 5312671 -98182303 + MLT1A0 LTR MaLR 1 146 -244 5 625 254 143 20 0 chr15 5312681 5312730 -98182244 + GA-rich Low_complexity Low_complexity 3 52 0 5 625 291 305 0 0 chr15 5312906 5312988 -98181986 + MLT1A0 LTR MaLR 319 400 -8 5 625 937 197 98 0 chr15 5313075 5313232 -98181742 + B3 SINE B2 1 175 -41 5 625 441 0 0 0 chr15 5313232 5313281 -98181693 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 625 937 197 98 0 chr15 5313281 5313316 -98181658 + B3 SINE B2 176 211 -5 5 625 475 272 128 0 chr15 5314600 5314725 -98180249 + ID_B1 SINE B4 83 223 -1 5 625 23222 111 41 14 chr15 5314730 5317717 -98177257 + L1_Mus1 LINE L1 423 3491 -2392 5 625 467 17 17 0 chr15 5317717 5317777 -98177197 + (CAA)n Simple_repeat Simple_repeat 1 61 0 5 625 23222 103 16 17 chr15 5317777 5318983 -98175991 + L1_Mus1 LINE L1 3492 4700 -1183 5 625 39471 6 0 1 chr15 5318954 5324726 -98170248 + L1Md_A LINE L1 1 5586 -297 6 625 9596 4 0 0 chr15 5324726 5325722 -98169252 + L1Md_A LINE L1 5587 6582 0 6 625 7981 91 22 3 chr15 5325731 5327600 -98167374 + L1_Mus1 LINE L1 4651 6566 -1 5 625 1024 281 51 64 chr15 5327807 5328259 -98166715 - Lx8 LINE L1 0 7473 7028 6 625 2103 95 3 69 chr15 5328259 5328608 -98166366 + IAPLTR1a_Mm LTR ERVK 1 326 -11 6 625 48755 9 4 9 chr15 5328609 5335118 -98159856 + IAPEz-int LTR ERVK 1 6481 0 6 625 2087 95 3 69 chr15 5335118 5335467 -98159507 + IAPLTR1a_Mm LTR ERVK 1 326 -11 6 625 521 299 128 4 chr15 5335970 5336212 -98158762 - RLTR10A LTR ERVK 0 411 140 6 625 950 164 198 0 chr15 5336689 5336866 -98158108 - B3 SINE B2 0 216 5 6 625 265 349 85 8 chr15 5337733 5337863 -98157111 - MIR SINE MIR -9 253 114 6 625 906 301 65 33 chr15 5338208 5338668 -98156306 + Lx9 LINE L1 6985 7459 -185 6 625 536 362 52 68 chr15 5338772 5339157 -98155817 + MLT1D LTR MaLR 22 400 -105 6 625 888 118 0 0 chr15 5339644 5339780 -98155194 + (TTTC)n Simple_repeat Simple_repeat 2 137 0 6 625 219 262 16 47 chr15 5340023 5340087 -98154887 - L2a LINE L2 -1 3425 3364 6 625 231 281 0 0 chr15 5340044 5340101 -98154873 - MIRb SINE MIR -16 252 196 6 625 402 313 50 60 chr15 5341252 5341301 -98153673 + Lx9 LINE L1 5514 5561 -325 6 625 2311 152 94 0 chr15 5341301 5341714 -98153260 + Lx3B LINE L1 6520 6971 -2 6 625 4847 224 82 16 chr15 5341714 5343587 -98151387 + Lx9 LINE L1 5532 7637 -7 6 625 263 371 62 0 chr15 5345176 5345273 -98149701 - PB1 SINE Alu -8 119 17 6 625 931 264 5 0 chr15 5345320 5345528 -98149446 - B3 SINE B2 -7 209 1 6 625 8840 80 12 4 chr15 5345563 5347566 -98147408 + L1_Mus1 LINE L1 4549 6567 0 6 625 37 52 0 0 chr15 5347632 5347690 -98147284 + AT_rich Low_complexity Low_complexity 1 58 0 6 625 331 284 91 18 chr15 5347738 5347903 -98147071 - Charlie4a DNA MER1_type -193 315 139 6 625 8285 84 44 3 chr15 5348490 5349662 -98145312 - Lx3_Mus LINE L1 -5 7004 5785 6 625 189 0 0 0 chr15 5349662 5349683 -98145291 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 6 625 3524 74 11 6 chr15 5349687 5350161 -98144813 - L1_Mus1 LINE L1 0 6567 6092 6 625 597 58 103 0 chr15 5350161 5350248 -98144726 + L1_Mus1 LINE L1 5596 5691 -876 6 625 836 37 0 0 chr15 5350229 5350336 -98144638 - Lx3_Mus LINE L1 -1186 5795 5689 6 625 192 274 13 52 chr15 5351423 5351500 -98143474 + L2 LINE L2 2023 2096 -1323 6 625 626 287 118 94 chr15 5352394 5352430 -98142544 - MT2A LTR ERVL 0 601 561 6 625 542 15 15 0 chr15 5352430 5352497 -98142477 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 6 625 1783 216 142 0 chr15 5352497 5352892 -98142082 - MT2A LTR ERVL -41 560 1 6 625 2983 55 34 8 chr15 5353198 5353584 -98141390 - MTA_Mm LTR MaLR 0 396 1 6 625 223 160 0 39 chr15 5353939 5353971 -98141003 + T-rich Low_complexity Low_complexity 19 50 0 6 625 237 33 0 0 chr15 5353971 5354001 -98140973 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 625 223 160 0 39 chr15 5354001 5354020 -98140954 + T-rich Low_complexity Low_complexity 1 18 0 6 625 903 33 180 0 chr15 5354023 5354145 -98140829 - B1_Mm SINE Alu 0 147 4 6 625 531 276 104 95 chr15 5355426 5355555 -98139419 + ORR1E LTR MaLR 1 149 -210 6 625 3569 65 2 9 chr15 5355555 5356020 -98138954 + L1_Mus4 LINE L1 6164 6625 -11 6 625 531 276 104 95 chr15 5356020 5356226 -98138748 + ORR1E LTR MaLR 150 339 -20 6 625 5453 184 40 15 chr15 5356234 5357358 -98137616 - MERVL_2A-int LTR ERVL -3843 1918 767 6 625 228 326 76 0 chr15 5357632 5357724 -98137250 - Charlie2b DNA MER1_type -1629 1153 1055 6 625 277 320 62 56 chr15 5358060 5358222 -98136752 + RSINE1 SINE B4 3 165 0 6 625 6327 98 88 18 chr15 5359865 5360851 -98134123 + Lx3C LINE L1 5922 6976 0 6 625 204 40 0 0 chr15 5360975 5361000 -98133974 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 625 316 243 14 0 chr15 5361106 5361180 -98133794 + ID4_ SINE ID 2 76 -7 6 625 1123 89 7 0 chr15 5361478 5361624 -98133350 - B1_Mus1 SINE Alu -1 147 1 6 625 338 131 33 0 chr15 5361786 5361847 -98133127 - L1Md_F2 LINE L1 -261 6321 6259 6 625 2773 133 8 5 chr15 5361839 5362779 -98132195 - L1VL4 LINE L1 -2290 1527 578 6 625 183 232 0 0 chr15 5362950 5363006 -98131968 + CT-rich Low_complexity Low_complexity 1 56 0 6 625 372 22 0 0 chr15 5363011 5363056 -98131918 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 625 736 96 43 0 chr15 5364015 5364130 -98130844 + L1_Mus2 LINE L1 6446 6565 -1 6 625 406 289 62 27 chr15 5364278 5364424 -98130550 - MER5A1 DNA MER1_type -2 164 14 6 625 384 163 0 0 chr15 5364685 5364771 -98130203 + (CTA)n Simple_repeat Simple_repeat 1 86 0 6 625 2124 43 0 0 chr15 5364815 5365069 -98129905 - L1Md_T LINE L1 0 6582 6329 6 625 201 356 114 26 chr15 5366643 5366871 -98128103 - L2 LINE L2 -1108 2311 2064 6 625 727 105 0 20 chr15 5366944 5367090 -98127884 + RMER17B LTR ERVK 318 460 -498 6 625 562 370 109 13 chr15 5367181 5367567 -98127407 - L2 LINE L2 -1575 1844 1422 6 625 395 260 68 136 chr15 5367581 5367716 -98127258 + L1MA5 LINE L1 5902 6036 -264 6 625 459 72 0 0 chr15 5367716 5367785 -98127189 + L1_Mus2 LINE L1 6498 6566 0 6 625 395 260 68 136 chr15 5367785 5367872 -98127102 + L1MA5 LINE L1 6037 6114 -186 6 625 405 0 0 0 chr15 5367872 5367917 -98127057 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 625 395 260 68 136 chr15 5367917 5368120 -98126854 + L1MA5 LINE L1 6115 6299 -1 6 625 417 349 139 7 chr15 5368167 5368470 -98126504 - L2 LINE L2 -2032 1387 1045 6 625 1628 180 40 54 chr15 5368580 5368992 -98125982 + RMER16 LTR ERVK 1 533 0 6 625 313 347 135 48 chr15 5369310 5369770 -98125204 - L2 LINE L2 -2248 1171 672 6 625 550 272 72 90 chr15 5369997 5370348 -98124626 - MLT1C LTR MaLR 0 390 38 6 625 317 307 47 16 chr15 5371432 5371561 -98123413 - MIRb SINE MIR -113 155 23 6 625 281 250 32 11 chr15 5371963 5372056 -98122918 + (TCTCTG)n Simple_repeat Simple_repeat 4 98 0 6 625 501 254 98 8 chr15 5372730 5372853 -98122121 - B1F2 SINE Alu -6 143 10 6 625 375 83 0 0 chr15 5373510 5373570 -98121404 + (T)n Simple_repeat Simple_repeat 1 60 0 6 626 22 56 0 0 chr15 5374269 5374305 -98120669 + AT_rich Low_complexity Low_complexity 1 36 0 6 626 362 260 0 0 chr15 5375045 5375122 -98119852 + PB1D10 SINE Alu 27 103 -14 6 626 5732 84 24 10 chr15 5375277 5376795 -98118179 - L1VL2 LINE L1 -1789 1826 283 6 626 925 182 78 0 chr15 5376918 5377110 -98117864 - MTC LTR MaLR 0 419 213 6 626 585 209 20 26 chr15 5377126 5377278 -98117696 - Lx4B LINE L1 0 7058 6908 6 626 1332 139 14 0 chr15 5377278 5377487 -98117487 - MTC LTR MaLR -209 212 1 6 626 221 295 40 36 chr15 5377899 5378011 -98116963 + MIRm SINE MIR 56 170 -106 6 626 5562 90 62 11 chr15 5378620 5379437 -98115537 - Lx LINE L1 -6 6648 5790 6 626 326 378 9 0 chr15 5379507 5379618 -98115356 + ID_B1 SINE B4 94 205 -19 6 626 1961 173 104 8 chr15 5380706 5381090 -98113884 - MTC LTR MaLR 0 421 1 6 626 27 29 0 0 chr15 5381652 5381686 -98113288 + AT_rich Low_complexity Low_complexity 1 34 0 6 626 183 80 0 0 chr15 5381691 5381716 -98113258 + (A)n Simple_repeat Simple_repeat 1 25 0 6 626 629 291 34 11 chr15 5381723 5381987 -98112987 + L1MA6 LINE L1 6000 6269 -31 6 626 1039 322 62 15 chr15 5382371 5382837 -98112137 + Lx8 LINE L1 6812 7299 -174 6 626 396 0 0 0 chr15 5382864 5382908 -98112066 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 626 346 317 43 32 chr15 5383257 5383443 -98111531 - L1MD2 LINE L1 -426 5933 5746 6 626 443 207 74 0 chr15 5384294 5384429 -98110545 - Lx9 LINE L1 -11 7633 7489 6 626 7690 117 61 36 chr15 5384444 5385608 -98109366 - Lx2B LINE L1 -3 6997 5799 6 626 1214 55 0 0 chr15 5385608 5385754 -98109220 - B1_Mus1 SINE Alu 0 148 3 6 626 7690 140 27 38 chr15 5385754 5386285 -98108689 - Lx2B LINE L1 -86 5800 5271 6 626 378 188 0 20 chr15 5386283 5386381 -98108593 - Lx9 LINE L1 -66 7578 7483 6 626 1815 224 70 35 chr15 5386383 5386841 -98108133 - RMER19C LTR ERVK 0 611 138 6 626 1450 188 63 0 chr15 5386863 5387182 -98107792 - Lx9 LINE L1 -184 7460 7122 6 626 372 352 167 43 chr15 5387182 5387506 -98107468 + MLT1A1 LTR MaLR 43 406 -2 6 626 552 15 0 0 chr15 5387764 5387829 -98107145 + (CA)n Simple_repeat Simple_repeat 2 66 0 6 626 24 0 0 0 chr15 5388435 5388459 -98106515 + AT_rich Low_complexity Low_complexity 1 24 0 6 626 260 234 0 0 chr15 5388467 5388531 -98106443 - Lx3A LINE L1 -7 6974 6911 6 626 580 171 9 0 chr15 5388545 5388656 -98106318 + Lx3B LINE L1 6764 6875 -98 6 626 7101 64 13 2 chr15 5388682 5389876 -98105098 - L1_Mus1 LINE L1 -1 6566 5360 6 626 22 35 0 0 chr15 5390058 5390087 -98104887 + AT_rich Low_complexity Low_complexity 1 29 0 6 626 29523 110 13 5 chr15 5390088 5396297 -98098677 - L1_Mus1 LINE L1 -1 6566 303 6 626 236 292 0 0 chr15 5396405 5396470 -98098504 - MIR3 SINE MIR -27 181 117 6 626 405 0 0 0 chr15 5397226 5397271 -98097703 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 626 1961 271 137 55 chr15 5397386 5397546 -98097428 - Lx9 LINE L1 -4 7640 7504 6 626 342 0 0 0 chr15 5397546 5397584 -98097390 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 626 1961 271 137 55 chr15 5397584 5398595 -98096379 - Lx9 LINE L1 -141 7503 6373 6 626 769 173 92 0 chr15 5398613 5398786 -98096188 - Lx9 LINE L1 -1087 6557 6369 6 626 484 150 35 9 chr15 5398790 5398904 -98096070 + Lx9 LINE L1 7403 7519 -125 6 626 32144 98 15 10 chr15 5398909 5405203 -98089771 - L1Md_F2 LINE L1 -2 6580 273 6 626 440 112 0 33 chr15 5405235 5405327 -98089647 + Lx9 LINE L1 7543 7631 -13 6 626 348 43 0 0 chr15 5405346 5405392 -98089582 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 626 313 294 29 0 chr15 5405581 5405683 -98089291 - Lx8 LINE L1 -146 7327 7223 6 626 875 204 136 23 chr15 5405687 5405988 -98088986 - Lx9 LINE L1 -65 7579 7245 6 626 1045 217 22 19 chr15 5406031 5406299 -98088675 + Lx9 LINE L1 5749 6017 -1627 6 626 336 335 111 65 chr15 5406344 5406606 -98088368 + MLT1E3 LTR MaLR 351 624 0 6 626 870 330 0 0 chr15 5406715 5406936 -98088038 - ID_B1 SINE B4 -2 222 2 7 626 731 160 135 0 chr15 5407034 5407190 -98087784 - URR1A DNA MER1_type -1 225 49 7 626 309 235 70 12 chr15 5407285 5407371 -98087603 + L1MEe LINE L1 339 429 -4425 7 626 333 0 0 0 chr15 5407392 5407429 -98087545 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 626 636 341 84 32 chr15 5407532 5407913 -98087061 - MLT1E2 LTR MaLR -74 553 206 7 626 186 288 182 25 chr15 5409955 5410076 -98084898 + MIRc SINE MIR 11 150 -118 7 626 233 296 177 31 chr15 5410375 5410491 -98084483 + MIRc SINE MIR 23 144 -124 7 626 477 0 0 0 chr15 5410491 5410544 -98084430 + (CTA)n Simple_repeat Simple_repeat 1 53 0 7 626 233 296 177 31 chr15 5410544 5410619 -98084355 + MIRc SINE MIR 145 242 -26 7 626 1843 270 33 2 chr15 5410625 5411111 -98083863 + Lx5 LINE L1 6542 7042 -8 7 626 3316 171 51 162 chr15 5411667 5412673 -98082301 - RLTR13D6 LTR ERVK -8 894 1 7 626 198 0 0 0 chr15 5412763 5412785 -98082189 + (T)n Simple_repeat Simple_repeat 1 22 0 7 626 968 98 18 6 chr15 5413683 5413848 -98081126 + (TCCC)n Simple_repeat Simple_repeat 4 170 0 7 626 279 268 0 35 chr15 5414347 5414432 -98080542 + GA-rich Low_complexity Low_complexity 5 86 0 7 626 272 27 27 0 chr15 5415042 5415079 -98079895 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 7 626 428 0 19 0 chr15 5415648 5415700 -98079274 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 626 2310 229 110 30 chr15 5415730 5416395 -98078579 + L1_Rod LINE L1 2498 3237 -2610 7 626 417 123 0 0 chr15 5416395 5416460 -98078514 + (CTAA)n Simple_repeat Simple_repeat 4 68 0 7 626 2310 229 110 30 chr15 5416460 5416768 -98078206 + L1_Rod LINE L1 3238 3549 -2298 7 626 1111 275 171 19 chr15 5417075 5417721 -98077253 - Lx9 LINE L1 -158 7486 6743 7 626 540 273 36 43 chr15 5417732 5417870 -98077104 + B4 SINE B4 150 286 -6 7 626 362 271 41 33 chr15 5418402 5418524 -98076450 - MER5A1 DNA MER1_type 0 166 44 7 626 358 312 267 27 chr15 5418765 5419111 -98075863 + MLT1F2 LTR MaLR 111 569 0 7 626 585 28 0 0 chr15 5419223 5419294 -98075680 + (TC)n Simple_repeat Simple_repeat 1 71 0 7 626 321 198 23 55 chr15 5419335 5419463 -98075511 - L1MB8 LINE L1 -9 6169 6046 7 626 612 123 49 44 chr15 5419526 5419654 -98075320 - B1_Mur3 SINE Alu -12 137 11 7 626 320 184 0 169 chr15 5419554 5419672 -98075302 - MT2B LTR ERVL -344 257 160 7 626 231 81 0 0 chr15 5419672 5419709 -98075265 - Lx9 LINE L1 -698 6946 6910 7 626 3814 119 25 43 chr15 5419710 5420362 -98074612 + RLTR26 LTR ERVK 1 640 -2 7 626 1490 188 113 14 chr15 5420369 5420714 -98074260 - Lx9 LINE L1 -746 6898 6520 7 626 829 256 93 37 chr15 5420712 5421292 -98073682 - Lx9 LINE L1 -1159 6485 5733 7 626 6689 158 24 5 chr15 5421304 5423293 -98071681 - Lx3C LINE L1 -2 6974 4939 7 626 22 35 0 0 chr15 5423300 5423329 -98071645 + AT_rich Low_complexity Low_complexity 1 29 0 7 626 756 188 105 40 chr15 5423359 5423559 -98071415 - Lx9 LINE L1 -171 5676 5464 7 626 374 346 55 3 chr15 5423567 5423857 -98071117 - L1M4 LINE L1 -1018 5128 4824 7 626 236 250 8 0 chr15 5424039 5424167 -98070807 + (CA)n Simple_repeat Simple_repeat 1 129 0 7 626 389 277 58 8 chr15 5424226 5424466 -98070508 - L1M4 LINE L1 -1604 4542 4291 7 626 477 0 0 0 chr15 5424489 5424542 -98070432 + (TCTA)n Simple_repeat Simple_repeat 1 53 0 7 626 2216 187 41 8 chr15 5424590 5425232 -98069742 + Lx7 LINE L1 5479 6156 -1540 7 626 556 194 0 30 chr15 5425235 5425368 -98069606 + Lx7 LINE L1 7568 7696 0 7 626 2079 166 41 8 chr15 5425394 5425788 -98069186 + MTB_Mm LTR MaLR 1 407 0 7 626 461 338 18 66 chr15 5425922 5426150 -98068824 + B4A SINE B4 70 286 -6 7 626 253 287 82 74 chr15 5426356 5426612 -98068362 - L1M4 LINE L1 -2390 3756 3499 7 626 234 176 0 0 chr15 5426638 5426689 -98068285 + (TA)n Simple_repeat Simple_repeat 1 51 0 7 626 392 310 180 21 chr15 5426737 5427070 -98067904 - L1M4 LINE L1 -2684 3462 3077 7 626 631 270 74 41 chr15 5427112 5427475 -98067499 - L1M4 LINE L1 -3128 3018 2644 7 626 6318 56 0 1 chr15 5427569 5428390 -98066584 + L1Md_F2 LINE L1 4767 5586 -297 7 626 7938 48 6 1 chr15 5428391 5429376 -98065598 + L1Md_F2 LINE L1 5588 6577 -5 7 626 385 271 136 20 chr15 5429391 5429685 -98065289 - L1M4 LINE L1 -3681 2465 2138 7 626 233 217 0 32 chr15 5429962 5430024 -98064950 + GA-rich Low_complexity Low_complexity 1 60 0 7 626 319 212 66 74 chr15 5430113 5430133 -98064841 + CYRA11_Mm Unknown Y-chromosome 154 172 -445 7 626 698 244 166 0 chr15 5430133 5430326 -98064648 - URR1B DNA MER1_type 0 225 1 7 626 22 0 0 0 chr15 5431851 5431873 -98063101 + AT_rich Low_complexity Low_complexity 1 22 0 7 626 1023 200 43 24 chr15 5431895 5432105 -98062869 + B3 SINE B2 1 214 -2 7 626 224 100 25 0 chr15 5432120 5432160 -98062814 + (CAA)n Simple_repeat Simple_repeat 3 43 0 7 626 279 54 0 0 chr15 5432423 5432460 -98062514 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 7 626 303 28 0 0 chr15 5433303 5433339 -98061635 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 626 1632 191 83 14 chr15 5434577 5434927 -98060047 + ORR1C1 LTR MaLR 1 374 -4 7 626 2990 246 46 3 chr15 5434941 5435641 -98059333 - Lx6 LINE L1 -4 7456 6727 7 626 3018 249 55 10 chr15 5435637 5436462 -98058512 + Lx6 LINE L1 5846 6707 -753 7 626 183 114 0 0 chr15 5436508 5436543 -98058431 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 7 626 4873 43 7 2 chr15 5436847 5437449 -98057525 - L1Md_F3 LINE L1 -14 6570 5966 7 626 249 333 61 61 chr15 5438103 5438266 -98056708 - Charlie4z DNA MER1_type -4 163 1 7 626 733 314 54 65 chr15 5438273 5438549 -98056425 + B4A SINE B4 15 287 -5 7 626 349 103 29 0 chr15 5438553 5438621 -98056353 + (CA)n Simple_repeat Simple_repeat 2 71 0 7 626 364 267 0 0 chr15 5438651 5438756 -98056218 + L1MA9 LINE L1 5641 5745 -555 7 626 3916 222 77 11 chr15 5438758 5439631 -98055343 + Lx9 LINE L1 6519 7420 -224 7 626 261 0 0 0 chr15 5439631 5439660 -98055314 + (TA)n Simple_repeat Simple_repeat 1 29 0 7 626 3916 222 77 11 chr15 5439660 5439819 -98055155 + Lx9 LINE L1 7421 7619 -25 7 626 227 31 0 30 chr15 5439833 5439866 -98055108 + (CCAA)n Simple_repeat Simple_repeat 2 33 0 7 626 945 284 134 7 chr15 5439964 5440255 -98054719 + MTD LTR MaLR 77 404 -15 7 626 238 270 130 33 chr15 5440342 5440434 -98054540 - Tigger7 DNA MER2_type -1438 1053 953 7 626 416 269 87 181 chr15 5440507 5440784 -98054190 - MER44D DNA MER2_type -444 261 11 7 626 299 200 41 21 chr15 5440784 5440881 -98054093 + L1MA9 LINE L1 5786 5884 -428 7 626 226 247 0 27 chr15 5441405 5441480 -98053494 + (TG)n Simple_repeat Simple_repeat 1 73 0 7 626 627 288 126 20 chr15 5441544 5441731 -98053243 + B4A SINE B4 5 210 -82 7 626 1194 47 0 0 chr15 5441731 5441880 -98053094 + (TTTTC)n Simple_repeat Simple_repeat 2 150 0 7 626 627 288 126 20 chr15 5441880 5441947 -98053027 + B4A SINE B4 211 285 -7 7 626 614 331 17 0 chr15 5443214 5443386 -98051588 - B4A SINE B4 -86 206 32 7 626 219 262 0 0 chr15 5444040 5444120 -98050854 + (CATG)n Simple_repeat Simple_repeat 1 80 0 7 626 613 281 22 35 chr15 5444659 5444888 -98050086 + MER33 DNA MER1_type 10 235 -89 7 626 30 0 0 0 chr15 5446731 5446761 -98048213 + AT_rich Low_complexity Low_complexity 1 30 0 7 626 21271 122 52 7 chr15 5446816 5451009 -98043965 - Lx4B LINE L1 -286 6772 2072 7 626 333 47 0 0 chr15 5451009 5451052 -98043922 + (TTA)n Simple_repeat Simple_repeat 1 43 0 7 626 21271 83 6 10 chr15 5451052 5452169 -98042805 - Lx4B LINE L1 -3812 2071 960 7 626 234 377 13 0 chr15 5452205 5452282 -98042692 + MER44C DNA MER2_type 655 732 -1 7 626 390 91 0 0 chr15 5452961 5453016 -98041958 + (TTTC)n Simple_repeat Simple_repeat 1 55 0 7 626 337 318 6 4 chr15 5453133 5453230 -98041744 + ID_B1 SINE B4 82 183 -109 7 626 459 235 43 61 chr15 5453566 5453729 -98041245 + Tigger7 DNA MER2_type 2332 2491 0 7 626 264 30 0 0 chr15 5454203 5454236 -98040738 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 7 626 231 36 0 0 chr15 5454342 5454370 -98040604 + (TA)n Simple_repeat Simple_repeat 2 29 0 7 626 348 64 0 0 chr15 5454445 5454492 -98040482 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 626 180 303 43 43 chr15 5454707 5454776 -98040198 - L3 LINE CR1 -135 4354 4286 7 626 371 362 88 32 chr15 5455092 5455469 -98039505 + LTR82A LTR ERVL 459 856 -16 7 626 240 35 0 0 chr15 5456586 5456615 -98038359 + (TC)n Simple_repeat Simple_repeat 2 30 0 7 626 284 255 32 11 chr15 5457157 5457252 -98037722 + GA-rich Low_complexity Low_complexity 6 102 0 7 626 216 97 0 0 chr15 5457262 5457293 -98037681 + (GGA)n Simple_repeat Simple_repeat 1 31 0 7 626 219 139 0 0 chr15 5458311 5458347 -98036627 + (TA)n Simple_repeat Simple_repeat 2 37 0 7 626 21 36 0 0 chr15 5459381 5459409 -98035565 + AT_rich Low_complexity Low_complexity 1 28 0 7 626 245 340 142 55 chr15 5459411 5459733 -98035241 - Lx8 LINE L1 -2 7471 7106 7 626 1417 136 214 30 chr15 5459733 5460036 -98034938 + RLTR15 LTR ERVK 1 359 0 7 626 245 340 142 55 chr15 5460036 5460277 -98034697 - Lx8 LINE L1 -368 7105 6859 7 626 713 148 44 0 chr15 5461571 5461706 -98033268 - B1_Mur3 SINE Alu 0 149 9 7 626 228 191 26 175 chr15 5461605 5461719 -98033255 - MT2B LTR ERVL -337 264 168 7 626 229 379 15 0 chr15 5463030 5463096 -98031878 - tRNA-Ala-GCY_ tRNA tRNA -7 68 2 7 626 300 27 0 0 chr15 5463116 5463153 -98031821 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 626 251 345 12 23 chr15 5463889 5463975 -98030999 + PB1 SINE Alu 36 120 -7 7 626 613 286 22 33 chr15 5464897 5465081 -98029893 - B3A SINE B2 -16 182 1 7 626 776 285 76 26 chr15 5465959 5466262 -98028712 + Lx8 LINE L1 6751 7068 -405 7 626 400 333 57 16 chr15 5466264 5466386 -98028588 + RSINE1 SINE B4 37 163 -2 7 626 708 330 36 10 chr15 5466450 5466759 -98028215 + Lx8 LINE L1 7041 7357 -116 7 626 256 279 15 0 chr15 5468928 5468996 -98025978 + CT-rich Low_complexity Low_complexity 3 71 0 7 626 3109 177 62 13 chr15 5469089 5469199 -98025775 - RMER1B Other Other -9 1057 938 7 626 186 43 0 0 chr15 5469199 5469222 -98025752 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 7 626 3109 212 81 23 chr15 5469222 5470206 -98024768 - RMER1B Other Other -129 937 55 7 626 891 239 79 60 chr15 5470213 5470529 -98024445 - RMER1B Other Other -703 363 42 7 626 231 61 0 0 chr15 5473644 5473677 -98021297 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 7 626 1147 82 0 0 chr15 5473678 5473825 -98021149 - B1_Mus1 SINE Alu 0 148 2 7 626 3694 179 81 93 chr15 5474431 5475344 -98019630 + RMER19B LTR ERVK 1 902 0 7 626 189 0 0 0 chr15 5475998 5476019 -98018955 + (T)n Simple_repeat Simple_repeat 1 21 0 7 626 690 13 0 0 chr15 5476569 5476648 -98018326 + (TC)n Simple_repeat Simple_repeat 1 79 0 8 626 306 0 0 0 chr15 5476648 5476681 -98018293 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 626 197 217 56 67 chr15 5477692 5477781 -98017193 - MIR SINE MIR -57 205 118 8 626 205 244 0 0 chr15 5478589 5478630 -98016344 + L2a LINE L2 3386 3426 0 8 626 269 363 72 22 chr15 5479581 5479719 -98015255 + MIR3 SINE MIR 2 146 -62 8 626 901 272 9 0 chr15 5479728 5479945 -98015029 - Lx5 LINE L1 -214 6836 6618 8 626 518 226 40 0 chr15 5479946 5480070 -98014904 + Lx5 LINE L1 6908 7036 -14 8 626 403 363 46 70 chr15 5480572 5480751 -98014223 - L2a LINE L2 -1 3425 3243 8 626 1946 198 69 157 chr15 5480751 5481421 -98013553 + RMER19C LTR ERVK 1 611 0 8 626 403 363 46 70 chr15 5481421 5481629 -98013345 - L2a LINE L2 -184 3242 3047 8 626 2860 46 0 0 chr15 5481648 5481994 -98012980 + MTA_Mm LTR MaLR 1 346 0 8 626 7666 84 23 4 chr15 5481994 5483069 -98011905 + MTA_Mm-int LTR MaLR 1 1096 -2 8 626 3096 66 2 5 chr15 5483071 5483468 -98011506 + MTA_Mm LTR MaLR 1 396 0 8 626 247 25 50 0 chr15 5483646 5483686 -98011288 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 8 626 337 295 35 9 chr15 5483802 5483915 -98011059 - MER5A1 DNA MER1_type -28 138 23 8 626 715 295 121 16 chr15 5484019 5484267 -98010707 - B4 SINE B4 -12 280 7 8 626 414 121 0 0 chr15 5484351 5484417 -98010557 + (A)n Simple_repeat Simple_repeat 1 66 0 8 626 385 290 56 95 chr15 5484494 5484534 -98010440 - B2_Mm2 SINE B2 -8 187 141 8 626 224 79 0 50 chr15 5484534 5484574 -98010400 + (TATG)n Simple_repeat Simple_repeat 1 38 0 8 626 558 296 22 22 chr15 5484574 5484712 -98010262 - B3 SINE B2 -63 153 16 8 626 233 355 0 53 chr15 5485015 5485110 -98009864 - MIRm SINE MIR -2 274 185 8 626 279 0 0 0 chr15 5485329 5485360 -98009614 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 626 480 18 0 0 chr15 5485360 5485416 -98009558 + (GA)n Simple_repeat Simple_repeat 1 57 0 8 626 226 246 17 17 chr15 5485816 5485874 -98009100 + MER5A DNA MER1_type 24 81 -108 8 626 252 0 0 0 chr15 5485929 5485957 -98009017 + (T)n Simple_repeat Simple_repeat 1 28 0 8 626 606 301 48 0 chr15 5486161 5486347 -98008627 - MER20 DNA MER1_type -24 195 1 8 626 783 307 52 23 chr15 5486377 5486687 -98008287 - MER33 DNA MER1_type 0 324 6 8 626 232 280 183 65 chr15 5486693 5486846 -98008128 - MER5A DNA MER1_type -15 174 4 8 626 213 39 0 0 chr15 5486887 5486913 -98008061 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 8 626 291 54 0 0 chr15 5488130 5488167 -98006807 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 8 626 1483 257 74 32 chr15 5488265 5488767 -98006207 - RMER5 LTR ERV1 -2 532 10 8 626 1073 243 76 49 chr15 5489773 5490102 -98004872 + RMER15 LTR ERVL 238 575 0 8 626 565 66 183 36 chr15 5490293 5490413 -98004561 - L1_Mus2 LINE L1 0 6638 6437 8 626 531 112 0 0 chr15 5490413 5490493 -98004481 + (TA)n Simple_repeat Simple_repeat 2 81 0 8 626 298 311 43 64 chr15 5490493 5490527 -98004447 - RSINE1 SINE B4 -1 164 127 8 626 243 0 0 0 chr15 5490527 5490554 -98004420 + (GA)n Simple_repeat Simple_repeat 1 27 0 8 626 298 311 43 64 chr15 5490554 5490660 -98004314 - RSINE1 SINE B4 -39 126 27 8 626 226 196 22 0 chr15 5491563 5491609 -98003365 - MTD LTR MaLR -12 407 361 8 626 1677 189 60 2 chr15 5492241 5492713 -98002261 + L1_Mur2 LINE L1 915 1403 -4474 8 626 5205 62 3 3 chr15 5492713 5493387 -98001587 - L1Md_F2 LINE L1 0 6582 5909 8 626 1557 176 85 2 chr15 5493387 5493598 -98001376 + L1_Mur2 LINE L1 1404 1633 -4244 8 626 2217 103 0 0 chr15 5493617 5493938 -98001036 + L1Md_F2 LINE L1 5854 6174 -408 8 626 838 107 79 0 chr15 5493938 5494078 -98000896 + L1Md_F2 LINE L1 6432 6582 0 8 626 6351 169 129 49 chr15 5494109 5494428 -98000546 + L1_Mur2 LINE L1 1640 1898 -3979 8 626 2800 99 7 2 chr15 5494428 5494832 -98000142 + L1_Mus3 LINE L1 6226 6631 -7 8 626 6351 169 129 49 chr15 5494832 5494993 -97999981 + L1_Mur2 LINE L1 1899 2060 -3817 8 626 434 33 17 0 chr15 5494993 5495053 -97999921 + (CA)n Simple_repeat Simple_repeat 1 61 0 8 626 6351 169 129 49 chr15 5495053 5496272 -97998702 + L1_Mur2 LINE L1 2061 3476 -2401 8 626 295 203 0 80 chr15 5496300 5496375 -97998599 - RMER19C LTR ERVK -37 574 506 8 626 283 361 28 0 chr15 5496992 5497100 -97997874 + B4A SINE B4 2 112 -180 8 626 2125 204 137 33 chr15 5497468 5497575 -97997399 - Lx9 LINE L1 -2 7642 7517 8 626 522 0 0 0 chr15 5497575 5497633 -97997341 + (CA)n Simple_repeat Simple_repeat 2 59 0 8 626 2125 204 137 33 chr15 5497633 5498221 -97996753 - Lx9 LINE L1 -128 7516 6877 8 626 241 200 73 44 chr15 5499227 5499295 -97995679 - MLT1A1 LTR MaLR -21 387 318 8 626 250 186 0 0 chr15 5499420 5499463 -97995511 - MT2A LTR ERVL -490 43 1 8 626 423 98 0 0 chr15 5501005 5501066 -97993908 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 626 38 51 0 0 chr15 5501066 5501125 -97993849 + AT_rich Low_complexity Low_complexity 1 59 0 2 626 189 74 0 0 chr15 5501125 5501152 -97993822 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 626 877 175 0 0 chr15 5501153 5501290 -97993684 - B1_Mur2 SINE Alu -12 137 1 4 626 215 125 0 0 chr15 5501472 5501504 -97993470 + (A)n Simple_repeat Simple_repeat 1 32 0 5 626 314 241 65 57 chr15 5501726 5501849 -97993125 + L1M5 LINE L1 3832 3955 -2191 6 626 352 88 0 0 chr15 5501872 5501929 -97993045 + L1_Mus2 LINE L1 6509 6565 -1 7 626 307 136 0 0 chr15 5501939 5501983 -97992991 + SRV_MM-int LTR ERVK 2369 2412 -3755 8 626 370 155 33 47 chr15 5502026 5502118 -97992856 + B1_Mm SINE Alu 48 147 0 9 626 286 29 0 136 chr15 5502118 5502199 -97992775 + (CAAA)n Simple_repeat Simple_repeat 3 72 0 1 626 303 314 129 13 chr15 5502796 5502951 -97992023 - MLT1D LTR MaLR -312 193 21 1 626 378 273 112 22 chr15 5503358 5503463 -97991511 + BLACKJACK DNA AcHobo 1901 2008 -936 1 626 2414 145 19 21 chr15 5503463 5503885 -97991089 - MTC LTR MaLR 0 421 1 1 626 378 273 112 22 chr15 5503885 5504011 -97990963 + BLACKJACK DNA AcHobo 2009 2153 -791 1 626 254 312 120 29 chr15 5504181 5504389 -97990585 + BLACKJACK DNA AcHobo 2407 2633 -311 1 626 988 224 28 0 chr15 5504551 5504765 -97990209 + ORR1D2 LTR MaLR 1 220 -150 1 627 540 0 0 0 chr15 5506180 5506240 -97988734 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 627 486 0 0 0 chr15 5506717 5506771 -97988203 + (TC)n Simple_repeat Simple_repeat 2 55 0 1 627 201 250 0 0 chr15 5507288 5507328 -97987646 + polypyrimidine Low_complexity Low_complexity 1 40 0 1 627 44 20 0 0 chr15 5509009 5509060 -97985914 + AT_rich Low_complexity Low_complexity 1 51 0 1 627 2412 54 3 19 chr15 5509641 5509960 -97985014 + L1Md_F2 LINE L1 6266 6579 -3 1 627 255 392 13 26 chr15 5511234 5511386 -97983588 - RSINE1 SINE B4 -12 153 4 2 627 1100 199 248 109 chr15 5511511 5511547 -97983427 - MT2A LTR ERVL 0 533 498 2 627 486 0 0 0 chr15 5511547 5511601 -97983373 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 627 1100 199 248 109 chr15 5511601 5511721 -97983253 - MT2A LTR ERVL -36 497 345 2 627 279 0 0 0 chr15 5511721 5511752 -97983222 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 627 1100 199 248 109 chr15 5511752 5512062 -97982912 - MT2A LTR ERVL -189 344 4 2 627 3200 195 46 51 chr15 5513313 5513490 -97981484 - Lx9 LINE L1 -1 7643 7481 2 627 261 0 0 0 chr15 5513490 5513519 -97981455 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 627 3200 195 46 51 chr15 5513519 5514123 -97980851 - Lx9 LINE L1 -164 7480 6866 2 627 552 297 74 0 chr15 5514132 5514280 -97980694 - B3 SINE B2 -10 206 48 2 627 29 60 0 0 chr15 5514457 5514507 -97980467 + AT_rich Low_complexity Low_complexity 1 50 0 2 627 13302 68 11 6 chr15 5514625 5517075 -97977899 - L1Md_F2 LINE L1 -12 6570 4110 2 627 6653 90 0 8 chr15 5517056 5518033 -97976941 - L1Md_F2 LINE L1 -5380 1344 371 2 627 1443 224 64 6 chr15 5518237 5518583 -97976391 - ORR1B2 LTR MaLR 0 367 2 2 627 309 324 39 32 chr15 5519469 5519718 -97975256 - L1ME1 LINE L1 -187 5992 5743 3 627 2590 181 44 19 chr15 5519837 5520287 -97974687 + RLTR20B3 LTR ERVK 25 471 -106 3 627 297 0 0 0 chr15 5520287 5520320 -97974654 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 627 2590 181 44 19 chr15 5520320 5520393 -97974581 + RLTR20B3 LTR ERVK 472 560 -17 3 627 325 301 22 0 chr15 5520404 5520524 -97974450 - L1ME1 LINE L1 -565 5614 5488 3 627 3214 184 19 47 chr15 5521274 5522002 -97972972 + L1_Mur3 LINE L1 4713 5420 -460 3 627 209 33 0 32 chr15 5522002 5522033 -97972941 + (CAAAC)n Simple_repeat Simple_repeat 1 30 0 3 627 279 0 0 0 chr15 5524300 5524331 -97970643 + (A)n Simple_repeat Simple_repeat 1 31 0 3 627 347 271 21 10 chr15 5524404 5524501 -97970473 + MTD LTR MaLR 10 107 -312 3 627 1596 238 39 43 chr15 5524512 5525138 -97969836 - ORR1D-int LTR MaLR -300 1070 231 3 627 443 268 39 84 chr15 5525139 5525318 -97969656 + Lx6 LINE L1 7070 7240 -220 3 627 575 160 0 0 chr15 5525313 5525413 -97969561 + Lx9 LINE L1 7381 7480 -164 3 627 183 80 0 0 chr15 5525413 5525438 -97969536 + (CATA)n Simple_repeat Simple_repeat 2 26 0 4 627 2476 274 89 9 chr15 5525526 5526281 -97968693 + Lx7 LINE L1 6497 7311 -385 4 627 499 184 37 6 chr15 5526290 5526409 -97968565 + CT-rich Low_complexity Low_complexity 51 172 0 4 627 1431 50 0 0 chr15 5526409 5526589 -97968385 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 4 627 499 184 37 6 chr15 5526589 5526633 -97968341 + polypyrimidine Low_complexity Low_complexity 4 50 0 4 627 727 174 131 9 chr15 5526842 5527056 -97967918 - Lx9 LINE L1 -22 7622 7383 4 627 373 335 60 63 chr15 5527737 5528144 -97966830 - MLT1A LTR MaLR -24 384 6 4 627 233 333 51 0 chr15 5528238 5528355 -97966619 + MER103 DNA DNA 13 135 -31 4 627 441 273 54 78 chr15 5529063 5529230 -97965744 + RSINE1 SINE B4 3 165 0 4 627 462 119 0 12 chr15 5529301 5529386 -97965588 + L1_Mus3 LINE L1 6548 6631 -7 4 627 21 57 0 0 chr15 5529420 5529455 -97965519 + AT_rich Low_complexity Low_complexity 1 35 0 5 627 222 37 0 0 chr15 5531006 5531033 -97963941 + (CAT)n Simple_repeat Simple_repeat 2 28 0 5 627 665 12 0 12 chr15 5531048 5531131 -97963843 + (TTTA)n Simple_repeat Simple_repeat 3 84 0 5 627 246 224 20 0 chr15 5531132 5531181 -97963793 - B3 SINE B2 -38 178 129 5 627 243 290 14 0 chr15 5531194 5531263 -97963711 - B3A SINE B2 -125 73 4 5 627 1735 219 8 5 chr15 5531504 5531881 -97963093 + ORR1C1 LTR MaLR 1 378 0 5 627 929 279 91 35 chr15 5532214 5532611 -97962363 + MTD LTR MaLR 1 419 0 5 627 316 309 83 9 chr15 5533596 5533704 -97961270 + B4 SINE B4 1 116 -176 5 627 473 257 10 0 chr15 5533717 5533818 -97961156 + B4A SINE B4 187 288 -4 5 627 429 54 0 0 chr15 5535516 5535572 -97959402 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 627 940 156 0 11 chr15 5536680 5536862 -97958112 + GA-rich Low_complexity Low_complexity 1 180 0 5 627 30672 92 29 6 chr15 5537672 5542918 -97952056 + L1Md_F2 LINE L1 217 5586 -297 5 627 7153 84 10 8 chr15 5542918 5543912 -97951062 + L1Md_F2 LINE L1 5587 6582 0 5 627 1116 291 38 51 chr15 5544127 5544500 -97950474 + RCHARR1 DNA MER1_type 18 385 -589 6 627 206 283 0 0 chr15 5544972 5545025 -97949949 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 6 627 319 292 22 14 chr15 5545029 5545168 -97949806 + (TA)n Simple_repeat Simple_repeat 1 140 0 6 627 894 210 70 5 chr15 5546634 5546835 -97948139 + B3 SINE B2 2 215 -1 6 627 5064 45 13 0 chr15 5547383 5548006 -97946968 + L1Md_F2 LINE L1 5952 6582 0 6 627 242 361 36 36 chr15 5548219 5548331 -97946643 - LTR16C LTR ERVL -375 114 3 6 627 1130 264 170 3 chr15 5548695 5549007 -97945967 + ORR1D2 LTR MaLR 4 367 -3 6 627 242 315 55 0 chr15 5549253 5549326 -97945648 - Charlie12 DNA MER1_type -2794 79 3 6 627 549 330 153 33 chr15 5549425 5549877 -97945097 + RMER5 LTR ERV1 2 507 -27 6 627 233 343 29 0 chr15 5550301 5550371 -97944603 + ID4_ SINE ID 1 72 -11 6 627 1225 72 0 19 chr15 5550378 5550591 -97944383 + (CATA)n Simple_repeat Simple_repeat 1 208 0 7 627 268 111 37 0 chr15 5550591 5550645 -97944329 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 627 455 45 15 0 chr15 5550644 5550710 -97944264 + (GA)n Simple_repeat Simple_repeat 2 68 0 7 627 3476 20 2 0 chr15 5551691 5552086 -97942888 + MTA_Mm LTR MaLR 1 396 0 7 627 678 232 67 0 chr15 5552471 5552635 -97942339 - B3 SINE B2 -32 184 10 7 627 24 32 0 0 chr15 5553021 5553052 -97941922 + AT_rich Low_complexity Low_complexity 1 31 0 7 627 473 221 17 6 chr15 5553169 5553346 -97941628 + (TG)n Simple_repeat Simple_repeat 2 180 0 7 627 182 229 14 0 chr15 5553402 5553472 -97941502 + (TG)n Simple_repeat Simple_repeat 1 71 0 7 627 379 228 138 0 chr15 5553590 5553713 -97941261 + Lx9 LINE L1 6286 6425 -1219 7 627 2019 172 73 3 chr15 5553717 5554073 -97940901 + Lx9 LINE L1 6530 6910 -734 7 627 378 0 0 0 chr15 5554079 5554121 -97940853 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 627 687 25 0 0 chr15 5554121 5554201 -97940773 + (GA)n Simple_repeat Simple_repeat 1 81 0 7 627 412 321 14 36 chr15 5554203 5554342 -97940632 - B4A SINE B4 -88 204 69 8 627 261 200 0 0 chr15 5554534 5554584 -97940390 - L1M4 LINE L1 -1483 4663 4614 8 627 1598 268 30 45 chr15 5554829 5555294 -97939680 + LTR80A LTR ERVL 125 582 -1 8 627 485 314 23 37 chr15 5555337 5555552 -97939422 - ID_B1 SINE B4 -11 213 2 8 627 21 0 0 0 chr15 5555661 5555682 -97939292 + AT_rich Low_complexity Low_complexity 1 21 0 8 627 2937 273 67 23 chr15 5555985 5556692 -97938282 + Lx7 LINE L1 6435 7170 -526 8 627 1150 88 0 0 chr15 5556692 5556840 -97938134 + B1_Mus1 SINE Alu 1 148 0 8 627 2653 272 63 23 chr15 5556840 5557031 -97937943 + Lx7 LINE L1 7171 7369 -327 8 627 1180 87 13 9 chr15 5558214 5558447 -97936527 + (TATG)n Simple_repeat Simple_repeat 1 233 0 8 627 922 331 24 24 chr15 5558580 5558954 -97936020 + MLT1B LTR MaLR 6 379 -11 8 627 412 120 48 36 chr15 5559398 5559563 -97935411 + (TA)n Simple_repeat Simple_repeat 2 168 0 8 627 53 49 0 0 chr15 5559574 5559655 -97935319 + AT_rich Low_complexity Low_complexity 1 81 0 9 627 4557 84 2 2 chr15 5559660 5560270 -97934704 - L1_Mus1 LINE L1 0 6567 5958 9 627 18049 96 6 7 chr15 5560270 5560293 -97934681 - L1_Mm LINE L1 -848 5035 5019 9 627 1579 142 18 73 chr15 5560293 5560634 -97934340 + RLTRETN_Mm LTR ERVK 1 322 0 9 627 18049 96 6 7 chr15 5560634 5563390 -97931584 - L1_Mm LINE L1 -865 5018 2257 9 627 2705 217 92 68 chr15 5563397 5564258 -97930716 + RLTR13D6 LTR ERVK 10 890 -12 9 627 7032 99 19 22 chr15 5564265 5566177 -97928797 - L1VL1 LINE L1 -3621 2262 365 9 627 23 33 0 0 chr15 5566443 5566473 -97928501 + AT_rich Low_complexity Low_complexity 1 30 0 9 627 200 158 0 0 chr15 5566763 5566794 -97928180 + CT-rich Low_complexity Low_complexity 9 39 0 9 627 1059 119 0 0 chr15 5566794 5566970 -97928004 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 9 627 1117 77 0 7 chr15 5566979 5567122 -97927852 - B1_Mm SINE Alu -5 142 1 9 627 328 132 24 0 chr15 5568546 5568629 -97926345 + (TCTG)n Simple_repeat Simple_repeat 4 88 0 1 627 476 304 47 6 chr15 5568673 5568842 -97926132 - B3A SINE B2 -18 180 5 1 627 225 0 0 0 chr15 5570076 5570101 -97924873 + (T)n Simple_repeat Simple_repeat 1 25 0 1 627 603 201 0 0 chr15 5571097 5571271 -97923703 + (CA)n Simple_repeat Simple_repeat 2 175 0 1 627 1595 236 60 8 chr15 5571778 5572176 -97922798 + MTD LTR MaLR 1 419 0 1 627 1259 254 48 37 chr15 5572176 5572686 -97922288 + MTD-int LTR MaLR 1 603 -655 1 627 1515 246 49 5 chr15 5572686 5573094 -97921880 + MERVL_2A-int LTR ERVL 2341 2766 -2995 1 627 1651 139 60 8 chr15 5573100 5573462 -97921512 + RLTR9D LTR ERVK 1 409 0 1 627 445 235 15 16 chr15 5573505 5573651 -97921323 - L1_Rod LINE L1 -1317 4823 4660 1 627 486 268 141 16 chr15 5573794 5574023 -97920951 - RMER20B LTR ERVK -236 391 132 1 627 535 237 21 89 chr15 5574179 5574415 -97920559 - L1_Rod LINE L1 -1192 4655 4436 1 627 3696 177 35 41 chr15 5574416 5575152 -97919822 + RLTR25B LTR ERVK 1 732 -296 1 627 247 257 50 0 chr15 5575219 5575320 -97919654 + L1M2 LINE L1 4997 5102 -1041 1 627 320 330 37 14 chr15 5575389 5575684 -97919290 + L1M2 LINE L1 5090 5391 -752 1 627 347 173 0 55 chr15 5576371 5576481 -97918493 - L1Md_T LINE L1 0 6582 6479 1 627 3034 172 88 41 chr15 5576538 5577118 -97917856 + L1VL4 LINE L1 205 837 -5465 1 627 5282 57 0 6 chr15 5577118 5577785 -97917189 + L1Md_F2 LINE L1 5917 6579 -3 1 627 7164 90 28 11 chr15 5577785 5578988 -97915986 + L1VL4 LINE L1 838 2042 -1517 1 627 24197 75 3 1 chr15 5578986 5583113 -97911861 - L1Md_F LINE L1 -1179 4704 570 1 627 2579 148 17 9 chr15 5583106 5583570 -97911404 + L1_Mm LINE L1 4401 4868 -1015 1 627 285 94 16 0 chr15 5583555 5583619 -97911355 + L1_Mus4 LINE L1 6569 6633 -3 1 627 504 48 0 0 chr15 5585074 5585137 -97909837 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 627 378 143 0 0 chr15 5585137 5585200 -97909774 + (GGA)n Simple_repeat Simple_repeat 3 65 0 1 627 499 239 139 14 chr15 5585440 5585584 -97909390 - RSINE1 SINE B4 0 165 4 1 627 648 70 0 0 chr15 5585600 5585686 -97909288 + (TTCC)n Simple_repeat Simple_repeat 3 88 0 1 627 2125 160 32 25 chr15 5585686 5586090 -97908884 - Lx2B LINE L1 -10 6990 6584 1 627 565 172 0 0 chr15 5586090 5586189 -97908785 + Lx2B LINE L1 6422 6520 -480 1 627 7407 60 1 11 chr15 5587600 5588046 -97906928 - L1Md_F2 LINE L1 -3 6579 6144 1 627 4456 76 9 3 chr15 5588046 5588630 -97906344 + LTRIS_Mus LTR ERV1 1 587 0 1 627 7407 54 0 6 chr15 5588630 5589630 -97905344 - L1Md_F2 LINE L1 -439 6143 5146 1 627 585 225 50 46 chr15 5590688 5590907 -97904067 - Lx4B LINE L1 -20 7038 6819 1 627 2909 176 36 20 chr15 5590967 5591517 -97903457 - Lx LINE L1 0 6654 6096 1 627 3094 125 3 2 chr15 5591517 5592073 -97902901 - Lx2 LINE L1 -1092 5905 5346 1 627 1427 200 187 0 chr15 5592398 5592548 -97902426 - ORR1D1 LTR MaLR 0 374 211 1 627 873 126 0 0 chr15 5592548 5592723 -97902251 + (GA)n Simple_repeat Simple_repeat 2 176 0 1 627 1427 200 187 0 chr15 5592723 5592887 -97902087 - ORR1D1 LTR MaLR -164 210 3 1 627 1077 113 0 0 chr15 5593934 5594368 -97900606 + (TG)n Simple_repeat Simple_repeat 1 434 0 1 627 315 154 0 19 chr15 5594370 5594423 -97900551 - HAL1-3A_ME LINE L1 -831 2027 1976 1 627 957 135 0 13 chr15 5594426 5594726 -97900248 + (TG)n Simple_repeat Simple_repeat 1 296 0 1 627 611 311 97 27 chr15 5594742 5595000 -97899974 - B4A SINE B4 -8 284 9 1 627 428 350 66 31 chr15 5595228 5595650 -97899324 - Lx8 LINE L1 -31 7442 7006 1 627 21 0 0 75 chr15 5596105 5596124 -97898850 + AT_rich Low_complexity Low_complexity 1 19 0 1 627 207 0 0 0 chr15 5596124 5596147 -97898827 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1 627 3326 56 0 21 chr15 5596148 5596584 -97898390 + L1_Mus1 LINE L1 6135 6561 -6 1 627 21 0 0 75 chr15 5596584 5596602 -97898372 + AT_rich Low_complexity Low_complexity 1 18 0 1 627 580 84 0 9 chr15 5597428 5597536 -97897438 - Lx3_Mus LINE L1 0 7009 6903 1 627 215 133 0 22 chr15 5598030 5598076 -97896898 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 1 627 243 0 0 0 chr15 5598842 5598869 -97896105 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 627 441 0 0 0 chr15 5598869 5598917 -97896057 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 627 253 141 0 27 chr15 5599396 5599469 -97895505 + (TGGG)n Simple_repeat Simple_repeat 1 71 0 1 627 1246 324 37 68 chr15 5599532 5600557 -97894417 - Lx7 LINE L1 -211 7262 6261 1 627 1147 269 112 37 chr15 5600557 5600931 -97894043 - MTD LTR MaLR 0 419 18 1 627 243 135 37 37 chr15 5600931 5600985 -97893989 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 1 627 219 114 0 0 chr15 5601140 5601175 -97893799 + (GGA)n Simple_repeat Simple_repeat 3 37 0 1 627 8663 71 12 32 chr15 5602180 5603414 -97891560 + Lx3_Mus LINE L1 5800 7009 0 1 627 351 0 0 0 chr15 5603448 5603487 -97891487 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 1 627 659 253 27 7 chr15 5603491 5603638 -97891336 - B3A SINE B2 -47 151 2 1 627 1268 284 58 22 chr15 5604418 5605001 -97889973 - Lx9 LINE L1 -127 7517 6914 1 627 781 333 67 20 chr15 5605091 5605437 -97889537 - MLT1A0 LTR MaLR -1 364 3 1 627 708 289 50 0 chr15 5605502 5605703 -97889271 - B3 SINE B2 -5 211 1 1 627 913 306 177 30 chr15 5605710 5606207 -97888767 - MER82 DNA MER2_type -6 647 78 1 627 585 307 30 30 chr15 5606834 5607032 -97887942 - MER21B LTR ERV1 -102 761 564 1 627 530 308 153 21 chr15 5607109 5607488 -97887486 - MER21B LTR ERV1 -433 430 3 1 627 1283 179 66 0 chr15 5607659 5607932 -97887042 + Lx9 LINE L1 6753 7043 -601 1 627 639 239 13 0 chr15 5607939 5608094 -97886880 + Lx9 LINE L1 7313 7469 -175 1 627 419 177 35 9 chr15 5608111 5608225 -97886749 + Lx9 LINE L1 7528 7644 0 1 627 210 156 0 0 chr15 5609404 5609449 -97885525 + T-rich Low_complexity Low_complexity 1 45 0 1 627 753 228 34 6 chr15 5610209 5610407 -97884567 + MTD LTR MaLR 1 244 -175 1 627 377 259 97 14 chr15 5610401 5610546 -97884428 + MTC-int LTR MaLR 1102 1258 0 1 627 566 373 53 23 chr15 5610761 5611027 -97883947 - B4A SINE B4 -8 284 11 1 627 891 275 42 68 chr15 5611515 5611780 -97883194 + MTD LTR MaLR 4 261 -158 1 627 688 123 25 0 chr15 5611780 5611902 -97883072 + (TTTC)n Simple_repeat Simple_repeat 1 125 0 1 627 1333 39 0 22 chr15 5611902 5612084 -97882890 + (TCCC)n Simple_repeat Simple_repeat 3 180 0 1 627 198 0 0 0 chr15 5612086 5612108 -97882866 + (TTTC)n Simple_repeat Simple_repeat 1 22 0 1 627 5894 136 32 21 chr15 5612113 5613747 -97881227 - Lx LINE L1 -12 6642 4993 1 627 14581 94 18 10 chr15 5613734 5614112 -97880862 - L1VL2 LINE L1 -311 3304 2940 1 627 3352 23 10 0 chr15 5614112 5614504 -97880470 + MTA_Mm LTR MaLR 1 396 0 1 627 14581 101 25 11 chr15 5614504 5617234 -97877740 - L1VL2 LINE L1 -676 2939 153 1 627 586 307 48 9 chr15 5617236 5617462 -97877512 + MTD LTR MaLR 139 402 -17 1 627 868 329 100 50 chr15 5617494 5617952 -97877022 + MLT1F2 LTR MaLR 7 487 -73 1 627 222 171 0 0 chr15 5617953 5617994 -97876980 + (TATATG)n Simple_repeat Simple_repeat 1 41 0 1 627 1234 96 28 6 chr15 5618735 5618914 -97876060 + B2_Mm2 SINE B2 1 183 -12 1 627 699 35 0 0 chr15 5618914 5619000 -97875974 + (GAAAA)n Simple_repeat Simple_repeat 2 87 0 1 627 469 297 48 32 chr15 5620054 5620242 -97874732 - MLT1H1 LTR MaLR -364 191 1 1 627 28 48 0 0 chr15 5620918 5620960 -97874014 + AT_rich Low_complexity Low_complexity 1 42 0 1 627 467 330 37 47 chr15 5621251 5621442 -97873532 - MLT1F1 LTR MaLR -52 517 329 1 627 315 288 132 32 chr15 5621467 5621657 -97873317 - MLT1F1 LTR MaLR -330 218 10 1 627 855 171 0 0 chr15 5621717 5621875 -97873099 + GA-rich Low_complexity Low_complexity 3 160 0 1 627 356 310 121 26 chr15 5622116 5622277 -97872697 - L1MD LINE L1 -730 5629 5451 1 627 486 0 0 0 chr15 5622277 5622331 -97872643 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 627 356 310 121 26 chr15 5622331 5622401 -97872573 - L1MD LINE L1 -909 5450 5376 1 627 277 297 172 83 chr15 5622404 5622420 -97872554 - B2_Mm2 SINE B2 -6 189 174 1 627 362 39 19 0 chr15 5622420 5622472 -97872502 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 627 502 266 127 30 chr15 5622472 5622624 -97872350 - B3 SINE B2 -22 173 6 1 627 734 205 100 5 chr15 5622683 5622903 -97872071 + Lx9 LINE L1 7400 7640 -4 1 627 27 49 0 0 chr15 5622911 5622952 -97872022 + AT_rich Low_complexity Low_complexity 1 41 0 1 627 1132 209 66 7 chr15 5622958 5623130 -97871844 + RMER1B Other Other 746 930 -136 1 627 649 0 25 0 chr15 5623130 5623211 -97871763 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 1 627 1132 209 66 7 chr15 5623211 5623327 -97871647 + RMER1B Other Other 931 1050 -16 1 627 339 301 92 17 chr15 5623360 5623654 -97871320 - L1M4 LINE L1 -903 5243 4928 1 627 189 0 0 0 chr15 5623856 5623877 -97871097 + (T)n Simple_repeat Simple_repeat 1 21 0 1 627 812 226 86 10 chr15 5625008 5625205 -97869769 + URR1A DNA MER1_type 1 212 -14 1 627 279 0 0 0 chr15 5626107 5626138 -97868836 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 627 365 271 115 0 chr15 5626141 5626237 -97868737 - PB1D9 SINE Alu -13 107 1 1 627 1165 289 90 80 chr15 5627257 5629058 -97865916 - L1M2 LINE L1 -1512 4631 2813 1 627 359 346 30 0 chr15 5629260 5629361 -97865613 + PB1D10 SINE Alu 3 106 -11 1 627 21 0 0 0 chr15 5629406 5629427 -97865547 + AT_rich Low_complexity Low_complexity 1 21 0 1 627 3062 30 0 35 chr15 5629495 5629872 -97865102 - RLTR10B2 LTR ERVK 0 365 2 1 627 270 81 0 0 chr15 5629872 5629909 -97865065 + (TATG)n Simple_repeat Simple_repeat 3 39 0 1 627 6353 70 5 0 chr15 5629985 5630832 -97864142 - L1_Mus1 LINE L1 0 6567 5717 1 627 1832 210 137 94 chr15 5630841 5631551 -97863423 - Lx9 LINE L1 -206 7438 6699 1 627 4423 14 0 0 chr15 5631748 5632241 -97862733 + MT2_Mm LTR ERVL 1 493 0 1 78 45518 17 0 0 chr15 5632241 5637601 -97857373 + MERVL-int LTR ERVL 1 5360 -125 1 628 380 179 46 35 chr15 5637601 5637688 -97857286 + ORR1A3-int LTR MaLR 553 640 -1323 1 628 302 0 0 0 chr15 5637688 5637726 -97857248 + MERVL-int LTR ERVL 5448 5485 0 1 628 3695 14 121 0 chr15 5637726 5638166 -97856808 + MT2_Mm LTR ERVL 1 493 0 1 628 740 351 74 24 chr15 5638394 5638837 -97856137 + MLT1E2 LTR MaLR 19 488 -136 1 628 7337 63 5 5 chr15 5639137 5640444 -97854530 - L1Md_F2 LINE L1 -11 6571 5265 1 628 2342 82 26 0 chr15 5640444 5640786 -97854188 + L1Md_F2 LINE L1 4903 5253 -630 1 628 4364 232 66 34 chr15 5642488 5643679 -97851295 - Lx7 LINE L1 -1 7695 6466 2 628 633 121 0 0 chr15 5644140 5644264 -97850710 + (TC)n Simple_repeat Simple_repeat 2 125 0 2 628 7546 51 4 2 chr15 5645602 5646731 -97848243 - L1Md_F2 LINE L1 -2 6580 5451 2 628 6452 70 8 0 chr15 5646723 5647803 -97847171 + L1Md_F2 LINE L1 4990 6078 -504 2 628 734 132 8 0 chr15 5647790 5647911 -97847063 + L1Md_F2 LINE L1 5328 5449 -434 2 628 231 252 0 37 chr15 5648193 5648300 -97846674 - Lx9 LINE L1 -85 7559 7457 2 628 362 185 12 0 chr15 5648404 5648485 -97846489 + (TA)n Simple_repeat Simple_repeat 1 82 0 2 628 266 180 16 0 chr15 5648575 5648636 -97846338 + (TA)n Simple_repeat Simple_repeat 1 62 0 2 628 535 290 21 78 chr15 5648864 5649148 -97845826 - Lx9 LINE L1 -460 7184 6917 2 628 1505 245 8 35 chr15 5649153 5649665 -97845309 - L1_Rod LINE L1 -400 5447 4950 2 628 6256 161 38 10 chr15 5649675 5650782 -97844192 - Lx4B LINE L1 -1 7057 5920 2 628 257 268 84 59 chr15 5651129 5651248 -97843726 - MLT1H LTR MaLR 0 549 428 2 628 343 255 37 19 chr15 5651336 5651444 -97843530 - RMER15 LTR ERVL -86 489 380 2 628 850 191 11 30 chr15 5652095 5652329 -97842645 + L1_Rod LINE L1 4767 5021 -856 2 628 5260 202 102 18 chr15 5652446 5653803 -97841171 + Lx9 LINE L1 6170 7639 -5 2 628 230 255 205 13 chr15 5653892 5654043 -97840931 - MLT1H LTR MaLR -369 180 1 2 628 1168 104 0 19 chr15 5655157 5655362 -97839612 - Lx3_Mus LINE L1 -799 6210 6010 2 628 5654 70 21 1 chr15 5655362 5656105 -97838869 + Lx3_Mus LINE L1 6246 7003 -6 2 628 206 388 30 30 chr15 5657187 5657288 -97837686 + MER5A DNA MER1_type 10 110 -79 2 628 961 177 123 7 chr15 5657734 5657878 -97837096 + Lx9 LINE L1 7326 7487 -157 2 628 273 57 0 0 chr15 5657878 5657913 -97837061 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 2 628 961 177 123 7 chr15 5657913 5658053 -97836921 + Lx9 LINE L1 7488 7643 -1 2 628 30 0 0 0 chr15 5659268 5659298 -97835676 + AT_rich Low_complexity Low_complexity 1 30 0 2 628 828 150 16 0 chr15 5659609 5659736 -97835238 + B1_Mur4 SINE Alu 22 150 0 2 628 21 0 0 0 chr15 5659739 5659760 -97835214 + AT_rich Low_complexity Low_complexity 1 21 0 2 628 663 327 65 41 chr15 5659976 5660314 -97834660 - MLT1E2 LTR MaLR -4 623 278 2 628 261 0 0 0 chr15 5660445 5660474 -97834500 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 628 1720 67 8 25 chr15 5660530 5660774 -97834200 - L1_Mus2 LINE L1 0 6566 6327 2 628 182 346 119 6 chr15 5660829 5660989 -97833985 + L2a LINE L2 3249 3426 0 2 628 465 177 0 0 chr15 5661103 5661216 -97833758 + T-rich Low_complexity Low_complexity 1 113 0 2 628 362 137 0 0 chr15 5662410 5662461 -97832513 + PB1D9 SINE Alu 1 51 -69 2 628 378 0 0 0 chr15 5662461 5662503 -97832471 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 628 288 0 0 0 chr15 5662503 5662534 -97832440 + (GA)n Simple_repeat Simple_repeat 2 33 0 2 628 601 255 102 14 chr15 5662541 5662860 -97832114 + Lx9 LINE L1 1080 1432 -4415 2 628 198 24 45 68 chr15 5662864 5662908 -97832066 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 2 628 295 301 10 0 chr15 5662940 5663043 -97831931 + Lx9 LINE L1 1441 1544 -4303 2 628 2128 81 38 54 chr15 5663048 5663362 -97831612 - RLTR27 LTR ERVK 0 309 1 2 628 1385 176 0 22 chr15 5663362 5663629 -97831345 - MMERVK10C-int LTR ERVK 0 7581 7321 2 628 351 320 17 17 chr15 5663763 5663935 -97831039 - MMERVK10C-int LTR ERVK -512 7069 6898 2 628 350 221 0 0 chr15 5664416 5664493 -97830481 - IAPEz-int LTR ERVK -1145 5336 5260 2 628 2641 314 52 38 chr15 5664490 5665271 -97829703 - IAP-d-int LTR ERVK -3763 2779 2000 2 628 1984 56 0 0 chr15 5665271 5665521 -97829453 - L1Md_F2 LINE L1 0 6582 6333 2 628 2641 314 52 38 chr15 5665521 5666785 -97828189 - IAP-d-int LTR ERVK -4543 1999 705 2 628 316 264 120 19 chr15 5666971 5667079 -97827895 - RLTR10-int LTR ERVK -6765 915 797 2 628 205 297 0 51 chr15 5667101 5667179 -97827795 + T-rich Low_complexity Low_complexity 5 78 0 2 628 707 233 46 41 chr15 5667180 5667377 -97827597 - RLTR10-int LTR ERVK -1135 852 655 2 628 378 20 20 20 chr15 5667409 5667460 -97827514 - RLTR10-int LTR ERVK -7314 267 217 2 628 2266 91 3 28 chr15 5667488 5667805 -97827169 - RLTR27 LTR ERVK 0 309 1 2 628 3182 247 74 22 chr15 5667811 5668837 -97826137 + Lx9 LINE L1 4680 5758 -89 2 628 180 0 0 0 chr15 5668860 5668880 -97826094 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2 628 1167 82 0 0 chr15 5668889 5669036 -97825938 + B1_Mus1 SINE Alu 2 148 0 2 628 2432 310 107 34 chr15 5669059 5670679 -97824295 + Lx9 LINE L1 5783 7627 -17 2 628 434 272 185 67 chr15 5671513 5671962 -97823012 + Charlie4a DNA MER1_type 3 504 -4 2 628 320 299 64 49 chr15 5672457 5672661 -97822313 + L1M3 LINE L1 2450 2656 -3487 2 628 1744 315 51 32 chr15 5672663 5673446 -97821528 - Lx8 LINE L1 -360 7113 6316 2 628 683 24 12 0 chr15 5673446 5673531 -97821443 + (TC)n Simple_repeat Simple_repeat 2 87 0 2 628 283 119 24 0 chr15 5673537 5673579 -97821395 - B1_Mus1 SINE Alu -104 44 2 2 628 677 85 64 36 chr15 5673698 5673808 -97821166 - BC1_Mm scRNA scRNA -37 115 3 2 628 25 51 0 0 chr15 5673811 5673850 -97821124 + AT_rich Low_complexity Low_complexity 1 39 0 2 628 1748 296 128 32 chr15 5673928 5675618 -97819356 + L1M3 LINE L1 2940 4791 -1349 2 628 243 288 13 27 chr15 5675616 5675691 -97819283 - Lx8 LINE L1 -904 6569 6496 2 628 371 302 70 60 chr15 5675687 5675888 -97819086 + Lx8 LINE L1 7269 7471 -2 2 628 621 297 105 30 chr15 5675904 5676410 -97818564 + L1M3 LINE L1 4781 5324 -816 2 628 6721 79 57 8 chr15 5676848 5677954 -97817020 - L1Md_F2 LINE L1 -1 6581 5447 2 628 36095 52 2 4 chr15 5677949 5683288 -97811686 - L1Md_F2 LINE L1 -1 6581 1263 2 628 25623 87 15 10 chr15 5683286 5686283 -97808691 - L1Md_F2 LINE L1 -909 4974 1967 2 628 511 27 53 0 chr15 5686283 5686358 -97808616 + (TTTTG)n Simple_repeat Simple_repeat 5 83 0 2 628 25623 123 11 21 chr15 5686358 5688083 -97806891 - L1Md_F2 LINE L1 -3917 1966 257 2 628 2053 198 15 5 chr15 5688075 5688477 -97806497 - L1VL1 LINE L1 -6016 406 1 2 628 228 211 115 0 chr15 5688907 5688959 -97806015 - MLT1A1 LTR MaLR -4 404 347 2 628 277 359 112 16 chr15 5690661 5690848 -97804126 + MIR SINE MIR 32 236 -26 2 628 471 256 23 81 chr15 5691029 5691203 -97803771 + RSINE1 SINE B4 2 165 0 2 628 527 349 14 41 chr15 5691292 5691513 -97803461 + ID_B1 SINE B4 10 224 0 2 628 399 221 50 9 chr15 5691815 5691924 -97803050 + B1F SINE Alu 9 116 -1 2 628 831 216 37 0 chr15 5692807 5693025 -97801949 + Lx9 LINE L1 7418 7643 -1 2 628 578 219 65 0 chr15 5693113 5693236 -97801738 - B3 SINE B2 -84 132 2 2 628 266 341 40 80 chr15 5694396 5694645 -97800329 - Lx8 LINE L1 -5 7468 7230 2 628 555 168 56 9 chr15 5694758 5694866 -97800108 + B1_Mus1 SINE Alu 30 142 -6 2 628 203 0 0 36 chr15 5694867 5694895 -97800079 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 2 628 668 294 189 22 chr15 5694994 5695311 -97799663 + MER74A LTR ERVL 4 373 -185 2 628 539 311 105 22 chr15 5695360 5695636 -97799338 - MER2 DNA MER2_type -7 338 40 2 628 272 48 24 0 chr15 5695999 5696041 -97798933 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 628 1052 198 27 38 chr15 5696140 5696403 -97798571 - Lx6 LINE L1 -2 7458 7199 2 628 823 311 85 16 chr15 5699069 5699753 -97795221 + L1M2 LINE L1 3042 3772 -2371 2 628 451 268 40 16 chr15 5699771 5699896 -97795078 + Lx8 LINE L1 7037 7164 -309 2 628 397 250 123 68 chr15 5699922 5700141 -97794833 + Lx8 LINE L1 7241 7471 -2 2 628 350 297 13 158 chr15 5700322 5700550 -97794424 + L1M2 LINE L1 3949 4143 -2000 2 628 7414 127 36 4 chr15 5700579 5701797 -97793177 - L1_Mus3 LINE L1 -384 5499 4243 2 628 7085 104 24 0 chr15 5701795 5702897 -97792077 + L1_Mus3 LINE L1 5502 6629 -9 2 628 1065 116 0 0 chr15 5702900 5703064 -97791910 + (GAAA)n Simple_repeat Simple_repeat 2 165 0 2 628 629 256 8 0 chr15 5703064 5703193 -97791781 - B1_Mur4 SINE Alu -20 130 1 2 628 441 0 0 0 chr15 5703479 5703528 -97791446 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 628 432 0 0 0 chr15 5703528 5703575 -97791399 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 628 615 327 83 48 chr15 5703833 5703866 -97791108 - MLT1A0 LTR MaLR -4 361 322 2 628 231 36 0 0 chr15 5703866 5703894 -97791080 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 628 615 327 83 48 chr15 5703894 5704197 -97790777 - MLT1A0 LTR MaLR -44 321 13 2 628 308 381 30 0 chr15 5707237 5707371 -97787603 + B1F1 SINE Alu 1 138 -11 2 628 493 225 27 9 chr15 5707394 5707506 -97787468 + RSINE1 SINE B4 11 124 -41 2 628 300 91 0 0 chr15 5707509 5707553 -97787421 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 628 1228 34 0 0 chr15 5707650 5707797 -97787177 + B1_Mm SINE Alu 1 147 0 2 628 22 0 0 0 chr15 5708093 5708115 -97786859 + AT_rich Low_complexity Low_complexity 1 22 0 2 628 634 86 52 43 chr15 5711130 5711361 -97783613 + (TCTCTG)n Simple_repeat Simple_repeat 1 232 0 2 628 900 128 0 0 chr15 5711370 5711549 -97783425 + (TC)n Simple_repeat Simple_repeat 2 180 0 2 628 513 0 0 0 chr15 5711549 5711605 -97783369 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 628 22 35 0 0 chr15 5713209 5713238 -97781736 + AT_rich Low_complexity Low_complexity 1 29 0 2 628 39 22 0 0 chr15 5713345 5713391 -97781583 + AT_rich Low_complexity Low_complexity 1 46 0 2 628 308 73 0 0 chr15 5713417 5713458 -97781516 + L1Md_F3 LINE L1 5550 5614 -560 2 628 8268 27 13 1 chr15 5713459 5714445 -97780529 + L1Md_F3 LINE L1 5587 6584 0 2 628 203 165 0 45 chr15 5714535 5714624 -97780350 + (TA)n Simple_repeat Simple_repeat 1 85 0 2 628 1291 83 0 32 chr15 5715375 5715561 -97779413 + L1_Mus1 LINE L1 6388 6567 0 2 628 1315 88 0 10 chr15 5715860 5716054 -97778920 + L1_Mus1 LINE L1 6376 6567 0 2 628 436 157 0 0 chr15 5716380 5716450 -97778524 + MTC LTR MaLR 1 70 -351 2 628 774 22 0 0 chr15 5716807 5716899 -97778075 + (GA)n Simple_repeat Simple_repeat 2 93 0 2 628 1799 184 0 0 chr15 5716902 5717195 -97777779 + MTC LTR MaLR 127 419 -2 2 628 1723 194 25 27 chr15 5717195 5717561 -97777413 + Lx4B LINE L1 6673 7037 -21 2 628 189 0 0 0 chr15 5717561 5717582 -97777392 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 2 628 789 112 136 27 chr15 5717823 5717970 -97777004 - Lx2 LINE L1 -15 6982 6820 2 628 375 336 30 8 chr15 5718224 5718356 -97776618 - MER63A DNA AcHobo -28 182 48 2 628 208 148 16 16 chr15 5719623 5719685 -97775289 + A-rich Low_complexity Low_complexity 2 63 0 2 628 3200 156 49 18 chr15 5719756 5720329 -97774645 - Lx3C LINE L1 -1 6975 6385 2 628 8608 24 0 0 chr15 5720319 5721442 -97773532 - L1Md_T LINE L1 -1 6581 5459 2 628 6312 15 0 3 chr15 5721442 5722170 -97772804 + L1Md_T LINE L1 4786 5511 -372 2 628 4701 143 21 0 chr15 5722154 5722917 -97772057 - Lx3C LINE L1 -572 6404 5626 2 628 5507 150 17 37 chr15 5722933 5724029 -97770945 + Lx3C LINE L1 4578 5651 -235 2 628 1876 164 263 60 chr15 5724253 5724677 -97770297 + RMER6C LTR ERVK 10 552 -138 2 628 2159 23 114 0 chr15 5724677 5724939 -97770035 + RLTR10B LTR ERVK 1 292 0 2 628 1876 164 263 60 chr15 5724939 5725080 -97769894 + RMER6C LTR ERVK 553 690 0 2 628 497 293 0 13 chr15 5725084 5725236 -97769738 - Lx9 LINE L1 -321 7323 7174 3 628 383 0 0 21 chr15 5725299 5725347 -97769627 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 628 691 281 55 0 chr15 5725535 5725734 -97769240 + B3 SINE B2 1 210 -6 3 628 290 273 59 20 chr15 5726080 5726181 -97768793 - PB1D10 SINE Alu -1 116 12 3 628 858 141 0 0 chr15 5726831 5727001 -97767973 + (TC)n Simple_repeat Simple_repeat 1 170 0 3 628 3306 187 37 18 chr15 5727597 5728276 -97766698 - Lx2B LINE L1 -13 6987 6296 3 628 34 24 0 0 chr15 5728598 5728639 -97766335 + AT_rich Low_complexity Low_complexity 1 41 0 3 628 9741 77 5 15 chr15 5729107 5731208 -97763766 - L1Md_F2 LINE L1 -12 6570 4497 3 628 8408 83 5 0 chr15 5731204 5732417 -97762557 + L1Md_F2 LINE L1 3288 4506 -1377 3 628 6520 109 8 1 chr15 5732415 5733586 -97761388 - L1_Mus1 LINE L1 -9 6558 5379 3 628 19040 121 17 11 chr15 5733584 5737618 -97757356 - L1_Mus1 LINE L1 -1486 4397 336 3 628 1146 89 0 0 chr15 5737784 5737930 -97757044 + B1_Mus2 SINE Alu 1 146 -1 3 628 325 85 72 12 chr15 5737930 5738013 -97756961 + A-rich Low_complexity Low_complexity 1 88 0 3 628 219 303 0 29 chr15 5738014 5738082 -97756892 + GA-rich Low_complexity Low_complexity 3 68 0 3 628 213 290 0 16 chr15 5738219 5738282 -97756692 - B4A SINE B4 -230 62 1 3 628 250 359 67 10 chr15 5738591 5738695 -97756279 + B3A SINE B2 58 167 -31 3 628 36814 6 0 0 chr15 5738789 5744147 -97750827 + L1Md_A LINE L1 228 5586 -297 3 628 9046 3 0 0 chr15 5744147 5745142 -97749832 + L1Md_A LINE L1 5587 6581 -1 3 628 1980 4 0 0 chr15 5745146 5745376 -97749598 + L1Md_A LINE L1 5357 5586 -297 3 628 8998 5 0 0 chr15 5745376 5746372 -97748602 + L1Md_A LINE L1 5587 6582 0 3 628 386 183 28 19 chr15 5746934 5747040 -97747934 + L1M2 LINE L1 5073 5179 -964 3 628 373 324 130 40 chr15 5747463 5747640 -97747334 + B4 SINE B4 100 292 0 3 628 203 361 65 32 chr15 5747681 5747804 -97747170 - MIRb SINE MIR -105 163 37 3 628 288 304 130 63 chr15 5748704 5749021 -97745953 - MLT1B LTR MaLR -5 500 109 3 628 2384 191 49 33 chr15 5749025 5749653 -97745321 - L1_Mur2 LINE L1 -5905 807 170 3 628 552 100 0 0 chr15 5749765 5749845 -97745129 + (TG)n Simple_repeat Simple_repeat 1 80 0 3 628 1371 325 37 39 chr15 5750022 5750642 -97744332 - Lx8 LINE L1 -241 7232 6614 3 628 185 311 153 16 chr15 5750780 5750904 -97744070 - MIR SINE MIR -70 192 52 3 628 696 294 13 97 chr15 5750932 5751158 -97743816 + ID_B1 SINE B4 17 223 -1 3 628 254 322 123 8 chr15 5752174 5752296 -97742678 - MLT1F LTR MaLR -76 472 337 3 628 399 315 63 0 chr15 5752349 5752492 -97742482 - MER76 LTR ERVL -76 615 464 3 628 453 186 35 7 chr15 5753859 5754000 -97740974 - Lx9 LINE L1 -7 7637 7493 3 628 2895 163 63 34 chr15 5754005 5754684 -97740290 + Lx2B LINE L1 5960 6658 -342 3 628 1144 108 0 0 chr15 5754687 5754863 -97740111 + L1_Mus3 LINE L1 5751 5926 -712 3 628 324 366 43 16 chr15 5755378 5755564 -97739410 + MIRb SINE MIR 45 235 -33 3 628 376 226 9 0 chr15 5756714 5756797 -97738177 + B1F1 SINE Alu 1 86 -41 3 628 330 351 81 115 chr15 5758006 5758328 -97736646 + MLT1F LTR MaLR 8 318 -251 3 628 622 264 142 51 chr15 5758407 5758702 -97736272 + MER76 LTR ERVL 102 423 -268 3 628 373 300 161 23 chr15 5758877 5759051 -97735923 + MLT1F LTR MaLR 337 558 -11 3 628 614 248 29 67 chr15 5759117 5759325 -97735649 - Lx6 LINE L1 -5 7455 7256 3 628 2101 250 168 5 chr15 5759328 5760026 -97734948 - Lx6 LINE L1 -358 7102 6075 3 628 29 0 0 0 chr15 5760373 5760402 -97734572 + AT_rich Low_complexity Low_complexity 1 29 0 3 628 351 267 81 46 chr15 5760744 5760917 -97734057 - MLT1A0 LTR MaLR -84 281 103 3 628 331 231 233 23 chr15 5761482 5761615 -97733359 + RMER1C Other Other 22 182 -1160 3 628 225 296 22 15 chr15 5761695 5761832 -97733142 + L1_Mur2 LINE L1 582 719 -6367 3 628 6078 189 66 51 chr15 5761958 5762692 -97732282 + L1_Mur2 LINE L1 675 1471 -4406 3 628 207 0 0 0 chr15 5762692 5762715 -97732259 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 3 628 6078 155 47 36 chr15 5762715 5763286 -97731688 + L1_Mur2 LINE L1 1472 2060 -3817 3 628 318 26 0 0 chr15 5763286 5763325 -97731649 + (GA)n Simple_repeat Simple_repeat 2 40 0 3 628 6078 155 47 36 chr15 5763325 5763842 -97731132 + L1_Mur2 LINE L1 2061 2583 -3294 3 628 3771 54 11 0 chr15 5763851 5764316 -97730658 - L1_Mus1 LINE L1 0 6567 6098 3 628 6074 195 57 4 chr15 5764350 5765611 -97729363 + Lx5 LINE L1 5723 7050 0 3 628 357 186 23 11 chr15 5765753 5765840 -97729134 + Lx6 LINE L1 7360 7447 -13 3 628 195 42 0 0 chr15 5765840 5765864 -97729110 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 628 23 0 0 0 chr15 5767111 5767134 -97727840 + AT_rich Low_complexity Low_complexity 1 23 0 3 629 195 42 0 0 chr15 5768564 5768588 -97726386 + (GA)n Simple_repeat Simple_repeat 1 24 0 3 629 4387 232 36 25 chr15 5770204 5770472 -97724502 - Lx7 LINE L1 -3 7693 7416 3 629 267 31 0 0 chr15 5770472 5770504 -97724470 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 629 4387 232 36 25 chr15 5770504 5771400 -97723574 - Lx7 LINE L1 -281 7415 6516 3 629 782 230 0 0 chr15 5771400 5771552 -97723422 + Lx7 LINE L1 6355 6506 -1190 3 629 25 0 0 0 chr15 5772035 5772060 -97722914 + AT_rich Low_complexity Low_complexity 1 25 0 3 629 1015 64 19 13 chr15 5772313 5772472 -97722502 - L1_Mus3 LINE L1 -1 6637 6478 3 629 361 283 148 20 chr15 5772873 5773075 -97721899 + Lx8 LINE L1 7225 7452 -21 3 629 26 50 0 0 chr15 5773183 5773223 -97721751 + AT_rich Low_complexity Low_complexity 1 40 0 3 629 489 43 0 14 chr15 5773876 5773946 -97721028 + L1Md_F2 LINE L1 6507 6575 -7 3 629 1127 236 34 37 chr15 5774230 5774666 -97720308 - Lx9 LINE L1 -2 7642 7208 3 629 30 27 0 0 chr15 5775016 5775053 -97719921 + AT_rich Low_complexity Low_complexity 1 37 0 3 629 295 350 40 67 chr15 5775893 5776043 -97718931 - B3A SINE B2 -6 192 47 3 629 297 354 52 33 chr15 5776100 5776313 -97718661 + MIR SINE MIR 44 260 -2 3 629 23 33 0 0 chr15 5776662 5776692 -97718282 + AT_rich Low_complexity Low_complexity 1 30 0 3 629 480 304 40 74 chr15 5777475 5777776 -97717198 + MLT1C LTR MaLR 59 443 -24 3 629 31313 73 6 9 chr15 5779351 5783678 -97711296 + L1Md_F2 LINE L1 355 4662 -1221 3 629 1727 48 26 4 chr15 5783678 5783909 -97711065 + L1Md_F3 LINE L1 6349 6584 0 3 629 31313 79 7 11 chr15 5783909 5784830 -97710144 + L1Md_F2 LINE L1 4663 5585 -298 3 629 8055 44 2 4 chr15 5784830 5785813 -97709161 + L1Md_F2 LINE L1 5587 6567 -15 3 629 335 23 0 22 chr15 5789062 5789107 -97705867 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 629 24 0 0 0 chr15 5789122 5789146 -97705828 + AT_rich Low_complexity Low_complexity 1 24 0 3 629 22 35 0 0 chr15 5789192 5789221 -97705753 + AT_rich Low_complexity Low_complexity 1 29 0 3 629 21 0 0 0 chr15 5789542 5789563 -97705411 + AT_rich Low_complexity Low_complexity 1 21 0 3 629 235 276 144 74 chr15 5789963 5790178 -97704796 + MIRc SINE MIR 4 233 -35 3 629 221 91 52 52 chr15 5790270 5790328 -97704646 + (CAAA)n Simple_repeat Simple_repeat 2 59 0 3 629 3010 70 8 10 chr15 5790440 5790841 -97704133 + MTB LTR MaLR 1 400 0 3 629 671 246 14 118 chr15 5790883 5790945 -97704029 + B3A SINE B2 1 59 -139 3 629 1863 147 65 0 chr15 5790945 5791252 -97703722 + ORR1A2 LTR MaLR 1 327 0 3 629 671 246 14 118 chr15 5791252 5791410 -97703564 + B3A SINE B2 60 198 0 3 629 215 106 0 41 chr15 5791790 5791839 -97703135 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 3 629 2274 75 15 21 chr15 5791839 5792168 -97702806 + IAPLTR2b LTR ERVK 1 327 0 3 629 219 190 13 52 chr15 5792171 5792326 -97702648 + (CAGAGA)n Simple_repeat Simple_repeat 4 152 0 3 629 181 193 24 24 chr15 5792355 5792440 -97702534 + (CAGA)n Simple_repeat Simple_repeat 4 88 0 3 629 210 306 9 75 chr15 5792586 5792692 -97702282 + MIRb SINE MIR 102 200 -68 3 629 354 157 0 35 chr15 5793511 5793597 -97701377 + (TA)n Simple_repeat Simple_repeat 2 84 0 3 629 506 16 16 0 chr15 5793718 5793781 -97701193 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 3 629 723 228 0 0 chr15 5793831 5793980 -97700994 - Lx9 LINE L1 -179 7465 7317 3 629 2447 289 110 35 chr15 5794009 5794970 -97700004 - Lx8 LINE L1 -151 7322 6290 3 629 690 226 32 0 chr15 5794968 5795123 -97699851 + Lx9 LINE L1 7298 7457 -187 3 629 189 0 0 0 chr15 5795205 5795226 -97699748 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 629 267 325 8 31 chr15 5795278 5795405 -97699569 + RMER12 LTR ERVK 737 860 -462 3 629 35 0 0 0 chr15 5795485 5795520 -97699454 + AT_rich Low_complexity Low_complexity 1 35 0 3 629 1095 71 0 0 chr15 5795700 5795841 -97699133 - B1_Mus2 SINE Alu -6 141 1 3 629 222 225 0 0 chr15 5796868 5796948 -97698026 + (TG)n Simple_repeat Simple_repeat 2 81 0 3 629 420 341 28 43 chr15 5796967 5797108 -97697866 - RSINE1 SINE B4 -16 149 11 3 629 787 139 157 0 chr15 5797115 5797281 -97697693 - B2_Mm2 SINE B2 -3 192 1 3 629 260 286 198 0 chr15 5798466 5798557 -97696417 - B4A SINE B4 -18 274 166 3 629 666 305 78 16 chr15 5798633 5798953 -97696021 + Lx9 LINE L1 7017 7356 -288 3 629 360 0 0 0 chr15 5799030 5799070 -97695904 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 629 31 26 0 0 chr15 5799172 5799210 -97695764 + AT_rich Low_complexity Low_complexity 1 38 0 3 629 772 123 98 12 chr15 5799270 5799434 -97695540 + L1_Mus3 LINE L1 6461 6638 0 3 629 755 169 12 0 chr15 5799484 5799650 -97695324 + CT-rich Low_complexity Low_complexity 3 170 0 3 629 297 286 30 1 chr15 5799652 5799752 -97695222 - PB1D10 SINE Alu -6 114 3 3 629 361 305 112 35 chr15 5800340 5800510 -97694464 - MLT2F LTR ERVL -43 620 438 3 629 261 33 0 0 chr15 5800571 5800601 -97694373 + L1_Mus2 LINE L1 5983 6012 -554 3 629 423 98 0 0 chr15 5800626 5800687 -97694287 + (GGAA)n Simple_repeat Simple_repeat 3 63 0 3 629 4066 60 62 0 chr15 5800758 5801294 -97693680 + L1_Mus2 LINE L1 5998 6566 0 3 629 40 21 0 0 chr15 5801392 5801439 -97693535 + AT_rich Low_complexity Low_complexity 1 47 0 3 629 214 196 0 56 chr15 5801469 5801523 -97693451 + (TTAGGG)n Simple_repeat Simple_repeat 3 53 0 3 629 325 321 47 0 chr15 5801623 5801729 -97693245 + Lx9 LINE L1 6361 6471 -1173 4 629 230 0 64 43 chr15 5802202 5802249 -97692725 + (CAAAAA)n Simple_repeat Simple_repeat 1 48 0 4 629 912 77 0 23 chr15 5803069 5803081 -97691893 - B1_Mus2 SINE Alu 0 147 137 4 629 243 0 0 0 chr15 5803081 5803108 -97691866 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 629 912 77 0 23 chr15 5803108 5803228 -97691746 - B1_Mus2 SINE Alu -11 136 18 4 629 279 0 0 0 chr15 5803388 5803419 -97691555 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 629 255 278 14 14 chr15 5804655 5804728 -97690246 - B4 SINE B4 -215 77 5 4 629 1187 306 101 63 chr15 5805339 5805499 -97689475 - Lx8 LINE L1 -9 7464 7330 4 629 1175 61 7 0 chr15 5805499 5805646 -97689328 - B1_Mus1 SINE Alu 0 148 1 4 629 1187 306 101 63 chr15 5805646 5806074 -97688900 - Lx8 LINE L1 -144 7329 6863 4 629 441 0 0 0 chr15 5806074 5806123 -97688851 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 629 1187 306 101 63 chr15 5806123 5806219 -97688755 - Lx8 LINE L1 -611 6862 6755 4 629 2289 156 27 82 chr15 5806282 5806770 -97688204 - RMER6B LTR ERVK 0 461 1 4 629 640 321 60 17 chr15 5807372 5807721 -97687253 - L1_Mur2 LINE L1 -241 5636 5273 4 629 1383 108 147 0 chr15 5807754 5807986 -97686988 - Lx3A LINE L1 -7 6974 6709 4 629 3199 119 2 18 chr15 5807970 5808467 -97686507 + Lx3A LINE L1 6111 6599 -382 4 629 595 256 55 42 chr15 5808481 5808807 -97686167 - L1_Mur2 LINE L1 -629 5251 4950 4 629 1901 273 78 13 chr15 5808805 5809577 -97685397 + L1_Mur3 LINE L1 3520 4341 -1539 4 629 472 292 78 6 chr15 5810036 5810215 -97684759 + Lx8 LINE L1 6670 6861 -612 4 629 328 358 13 13 chr15 5810251 5810404 -97684570 - RMER15-int LTR ERVL -347 4652 4500 4 629 1146 112 19 84 chr15 5811226 5811441 -97683533 + L1_Mus3 LINE L1 6432 6632 -6 4 629 210 254 0 0 chr15 5811463 5811522 -97683452 + A-rich Low_complexity Low_complexity 1 59 0 4 629 1895 252 83 72 chr15 5811686 5812582 -97682392 + Lx9 LINE L1 1834 2756 -3091 4 629 216 0 0 0 chr15 5812582 5812606 -97682368 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 4 629 1895 252 83 72 chr15 5812606 5812837 -97682137 + Lx9 LINE L1 2757 2974 -2873 4 629 545 229 55 39 chr15 5812874 5813019 -97681955 - Lx6 LINE L1 -2 7458 7313 4 629 3350 35 2 5 chr15 5813019 5813416 -97681558 - MTA_Mm LTR MaLR 0 396 1 4 629 545 229 55 39 chr15 5813416 5813452 -97681522 - Lx6 LINE L1 -148 7312 7274 4 629 1099 263 192 40 chr15 5813435 5814279 -97680695 + Lx9 LINE L1 2963 3934 -1913 4 629 690 301 50 60 chr15 5814321 5814639 -97680335 - RLTR26 LTR ERVK -207 435 121 4 629 3194 262 20 31 chr15 5814775 5815910 -97679064 + Lx9 LINE L1 4804 5959 -1685 4 629 189 0 0 0 chr15 5818916 5818937 -97676037 + (T)n Simple_repeat Simple_repeat 1 21 0 4 629 2681 131 61 5 chr15 5819791 5820219 -97674755 - Lx4A LINE L1 -235 6823 6372 4 629 1282 143 56 9 chr15 5820219 5820451 -97674523 + Lx4A LINE L1 6814 7056 -2 4 629 25 31 0 0 chr15 5820451 5820483 -97674491 + AT_rich Low_complexity Low_complexity 1 32 0 4 629 315 253 0 39 chr15 5821005 5821083 -97673891 + B1F SINE Alu 73 147 -2 4 629 21 36 0 0 chr15 5821403 5821431 -97673543 + AT_rich Low_complexity Low_complexity 1 28 0 4 629 324 123 70 0 chr15 5821528 5821585 -97673389 + Lx9 LINE L1 7388 7448 -196 4 629 235 279 0 0 chr15 5822046 5822114 -97672860 + Lx9 LINE L1 7414 7481 -163 4 629 314 0 49 0 chr15 5822346 5822387 -97672587 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 4 629 1969 230 46 36 chr15 5822437 5823080 -97671894 - Lx9 LINE L1 -1638 6006 5327 4 629 1858 199 14 30 chr15 5823102 5823537 -97671437 - Lx9 LINE L1 -636 5211 4784 4 629 219 133 0 0 chr15 5823580 5823625 -97671349 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 629 323 324 107 24 chr15 5823818 5824071 -97670903 - Lx7 LINE L1 -1793 5903 5630 4 629 55 29 0 0 chr15 5824090 5824159 -97670815 + AT_rich Low_complexity Low_complexity 1 69 0 4 629 6809 96 1 10 chr15 5824169 5825134 -97669840 + Lx3_Mus LINE L1 6054 7009 0 4 629 357 24 0 0 chr15 5825331 5825373 -97669601 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 629 21 0 0 0 chr15 5825420 5825441 -97669533 + AT_rich Low_complexity Low_complexity 1 21 0 4 629 973 94 0 0 chr15 5825584 5825722 -97669252 + L1_Mus1 LINE L1 6429 6566 -1 4 629 21 36 0 0 chr15 5826157 5826185 -97668789 + AT_rich Low_complexity Low_complexity 1 28 0 4 629 273 362 0 0 chr15 5826836 5826930 -97668044 + PB1D10 SINE Alu 3 96 -21 4 629 3117 126 24 4 chr15 5827213 5827708 -97667266 + Lx3B LINE L1 6468 6972 -1 4 629 225 89 20 82 chr15 5827754 5827803 -97667171 - MTE-int LTR MaLR -1256 324 279 4 629 854 252 98 25 chr15 5828342 5828486 -97666488 - L1M2 LINE L1 -1357 4786 4627 4 629 207 0 0 0 chr15 5828486 5828509 -97666465 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 629 854 223 128 68 chr15 5828509 5828777 -97666197 - L1M2 LINE L1 -1517 4626 4296 4 629 24 67 0 0 chr15 5829028 5829073 -97665901 + AT_rich Low_complexity Low_complexity 1 45 0 4 629 2289 96 32 6 chr15 5829426 5829771 -97665203 + L1_Mus4 LINE L1 6283 6636 0 4 629 2678 63 50 0 chr15 5829926 5830290 -97664684 - RLTR10 LTR ERVK -8 382 1 4 629 8358 37 1 3 chr15 5830290 5831289 -97663685 - RLTR10-int LTR ERVK -1 1986 990 4 629 518 318 17 17 chr15 5831439 5831679 -97663295 - RLTR10-int LTR ERVK -5481 1061 822 4 629 3456 56 14 0 chr15 5831819 5832250 -97662724 - RLTR10-int LTR ERVK -995 992 556 4 629 13897 166 21 13 chr15 5832263 5836978 -97657996 - ETnERV-int LTR ERVK -1994 5412 1 4 629 1904 112 28 22 chr15 5836978 5837298 -97657676 - RLTRETN_Mm LTR ERVK 0 322 1 4 629 3418 46 2 4 chr15 5837300 5837747 -97657227 - RLTR10-int LTR ERVK -1428 559 41 4 629 2933 57 49 0 chr15 5837759 5838129 -97656845 - RLTR10 LTR ERVK -2 388 1 4 629 519 112 0 0 chr15 5838175 5838255 -97656719 + (TA)n Simple_repeat Simple_repeat 2 81 0 4 629 23 0 0 0 chr15 5839192 5839215 -97655759 + AT_rich Low_complexity Low_complexity 1 23 0 4 629 2649 91 13 13 chr15 5839215 5839595 -97655379 - Lx3_Mus LINE L1 0 7009 6630 4 629 236 53 26 0 chr15 5839629 5839667 -97655307 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 629 1140 88 0 0 chr15 5839667 5839814 -97655160 - B1_Mus2 SINE Alu 0 147 1 4 629 1080 278 11 55 chr15 5841512 5841596 -97653378 - Lx7 LINE L1 -888 6808 6730 4 629 1752 134 110 0 chr15 5841596 5841888 -97653086 - ORR1A3 LTR MaLR 0 326 3 4 629 1080 278 11 55 chr15 5841888 5842165 -97652809 - Lx7 LINE L1 -967 6729 6463 4 629 1314 298 41 34 chr15 5842172 5842813 -97652161 + Lx7 LINE L1 6808 7473 0 4 629 252 0 0 0 chr15 5843168 5843196 -97651778 + (TC)n Simple_repeat Simple_repeat 2 29 0 4 629 450 211 0 0 chr15 5843196 5843300 -97651674 + (TA)n Simple_repeat Simple_repeat 2 105 0 4 629 1540 241 93 21 chr15 5843870 5844255 -97650719 - MTD LTR MaLR -6 413 1 4 629 3958 156 38 48 chr15 5845272 5846338 -97648636 - RLTR13D1 LTR ERVK 0 1023 1 4 629 4274 52 2 0 chr15 5846941 5847464 -97647510 - L1_Mus1 LINE L1 -4 6563 6040 4 629 594 158 0 70 chr15 5848559 5848688 -97646286 - URR1B DNA MER1_type -63 162 43 4 629 1921 244 118 34 chr15 5849137 5849322 -97645652 - Lx9 LINE L1 -146 7498 7298 4 629 2127 183 39 7 chr15 5849322 5849730 -97645244 + MTC LTR MaLR 1 421 0 4 629 1921 244 118 34 chr15 5849730 5850344 -97644630 - Lx9 LINE L1 -347 7297 6633 4 629 339 25 0 0 chr15 5851448 5851488 -97643486 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 629 685 215 121 39 chr15 5851548 5851780 -97643194 - RLTR11A LTR ERVK -80 448 198 4 629 1138 129 0 20 chr15 5852867 5853065 -97641909 - L1_Mus3 LINE L1 -9 6629 6436 4 629 978 88 0 0 chr15 5853065 5853202 -97641772 + L1_Mus3 LINE L1 6282 6418 -220 4 629 611 339 75 38 chr15 5854106 5854452 -97640522 + MLT1I LTR MaLR 43 401 -10 4 629 276 266 285 15 chr15 5855271 5855401 -97639573 - MER5A1 DNA MER1_type 0 166 2 4 629 1296 147 18 13 chr15 5855449 5855676 -97639298 + Lx3B LINE L1 6742 6969 -4 4 629 211 99 40 66 chr15 5855888 5855964 -97639010 + (TA)n Simple_repeat Simple_repeat 2 75 0 4 629 1038 110 0 0 chr15 5856658 5856813 -97638161 + (TAGA)n Simple_repeat Simple_repeat 4 158 0 4 629 264 170 0 0 chr15 5857032 5857085 -97637889 + CT-rich Low_complexity Low_complexity 3 55 0 4 629 366 305 31 74 chr15 5857212 5857375 -97637599 - MIR SINE MIR -89 173 18 4 629 276 149 0 0 chr15 5857397 5857444 -97637530 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 629 1124 300 98 16 chr15 5857526 5858166 -97636808 - Lx9 LINE L1 -610 7034 6342 4 629 342 0 0 0 chr15 5858390 5858428 -97636546 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 629 244 224 0 17 chr15 5859078 5859137 -97635837 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 629 454 348 19 46 chr15 5859153 5859412 -97635562 + MIR SINE MIR 11 262 0 4 629 6082 61 12 0 chr15 5859828 5860019 -97634955 - L1_Mm LINE L1 -447 5436 5244 4 629 441 0 0 0 chr15 5860019 5860068 -97634906 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 629 6082 61 12 0 chr15 5860068 5860708 -97634266 - L1_Mm LINE L1 -640 5243 4597 4 629 976 63 0 0 chr15 5860707 5860833 -97634141 + L1Md_F2 LINE L1 5461 5586 -297 4 629 8158 39 3 7 chr15 5860834 5861833 -97633141 + L1Md_F2 LINE L1 5588 6582 0 4 629 260 304 62 62 chr15 5862412 5862568 -97632406 - MIR SINE MIR -91 171 16 4 629 4038 166 73 11 chr15 5863146 5863955 -97631019 - Lx2B LINE L1 -5 6995 6137 4 629 956 320 39 36 chr15 5864264 5864543 -97630431 - B4A SINE B4 -4 288 9 4 629 249 83 0 0 chr15 5864619 5864655 -97630319 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 629 219 139 0 0 chr15 5866729 5866765 -97628209 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 629 371 191 0 0 chr15 5868438 5868506 -97626468 + BGLII_B LTR ERVK 1 68 -373 4 629 495 87 0 0 chr15 5868839 5868908 -97626066 + (GGA)n Simple_repeat Simple_repeat 3 71 0 4 629 476 307 65 60 chr15 5868953 5869154 -97625820 + MTEb LTR MaLR 75 276 -103 4 629 25 0 0 0 chr15 5869191 5869216 -97625758 + AT_rich Low_complexity Low_complexity 1 25 0 4 629 549 249 15 0 chr15 5871474 5871608 -97623366 - B1_Mur4 SINE Alu -8 142 2 4 629 450 0 0 0 chr15 5871728 5871778 -97623196 + (TTA)n Simple_repeat Simple_repeat 2 51 0 4 629 32 0 0 0 chr15 5872663 5872695 -97622279 + AT_rich Low_complexity Low_complexity 1 32 0 4 629 23 0 0 0 chr15 5873391 5873414 -97621560 + AT_rich Low_complexity Low_complexity 1 23 0 4 629 1108 89 0 0 chr15 5873743 5873889 -97621085 - B1_Mus2 SINE Alu 0 147 2 4 629 953 219 15 10 chr15 5874156 5874354 -97620620 - B3 SINE B2 -14 202 4 4 629 271 320 23 17 chr15 5875152 5875324 -97619650 - L1M5 LINE L1 -672 5507 5335 4 629 3527 18 2 0 chr15 5875424 5875819 -97619155 - MTA_Mm LTR MaLR 0 396 1 4 629 343 327 48 0 chr15 5875857 5876108 -97618866 + L1ME1 LINE L1 5628 5890 -289 5 629 716 293 10 0 chr15 5876398 5876603 -97618371 + B3 SINE B2 5 211 -5 5 629 21 0 0 0 chr15 5876613 5876634 -97618340 + AT_rich Low_complexity Low_complexity 1 21 0 5 629 236 268 85 0 chr15 5877138 5877220 -97617754 - ID_B1 SINE B4 -1 223 135 5 629 254 255 0 0 chr15 5877208 5877259 -97617715 - B4A SINE B4 -157 135 85 5 629 1117 270 116 33 chr15 5878315 5879003 -97615971 - L1MA5A LINE L1 -367 5930 5146 5 629 441 0 0 0 chr15 5879013 5879062 -97615912 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 629 370 270 45 0 chr15 5879118 5879207 -97615767 - B3A SINE B2 -105 93 1 5 629 374 182 125 29 chr15 5879873 5880009 -97614965 + L1M2a LINE L1 2083 2231 -4937 5 629 330 26 0 0 chr15 5880672 5880711 -97614263 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 629 252 0 0 0 chr15 5882239 5882267 -97612707 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 5 629 267 268 10 30 chr15 5883085 5883185 -97611789 - Lx8 LINE L1 -379 7094 6997 5 629 756 186 0 40 chr15 5883282 5883456 -97611518 + Lx3B LINE L1 6803 6969 -4 5 629 2480 96 119 5 chr15 5883496 5883873 -97611101 - RLTR9B2 LTR ERVK 0 420 1 5 629 21 0 0 0 chr15 5883997 5884018 -97610956 + AT_rich Low_complexity Low_complexity 1 21 0 5 629 201 108 0 0 chr15 5884088 5884125 -97610849 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 629 225 0 0 0 chr15 5885006 5885031 -97609943 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 5 629 309 272 36 24 chr15 5885808 5885891 -97609083 + RSINE1 SINE B4 10 93 -72 5 629 598 215 8 64 chr15 5885927 5886176 -97608798 + Lx9 LINE L1 7409 7643 -1 5 629 216 274 48 16 chr15 5886435 5886498 -97608476 + ID4 SINE ID 6 70 -13 5 629 441 0 0 0 chr15 5886498 5886547 -97608427 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 629 706 259 20 0 chr15 5887045 5887234 -97607740 + Lx6 LINE L1 6654 6849 -847 5 629 775 301 37 74 chr15 5887332 5887633 -97607341 - MLT1B LTR MaLR 0 390 101 5 629 1391 60 6 0 chr15 5887633 5887816 -97607158 + L1_Mus1 LINE L1 6383 6566 -1 5 629 775 301 37 74 chr15 5887816 5887919 -97607055 - MLT1B LTR MaLR -290 100 1 5 629 1076 122 0 16 chr15 5888485 5888668 -97606306 + (GAAAA)n Simple_repeat Simple_repeat 1 180 0 5 629 450 0 0 0 chr15 5891304 5891354 -97603620 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 629 431 293 106 0 chr15 5893056 5893179 -97601795 + ID_B1 SINE B4 81 216 -8 5 629 21 0 0 0 chr15 5893346 5893367 -97601607 + AT_rich Low_complexity Low_complexity 1 21 0 5 629 986 284 77 12 chr15 5894223 5894549 -97600425 - ORR1E LTR MaLR -1 369 1 5 629 365 308 108 34 chr15 5895732 5895880 -97599094 - RSINE1 SINE B4 0 165 7 5 629 909 182 177 0 chr15 5897824 5898016 -97596958 - URR1A DNA MER1_type 0 226 1 5 629 184 369 0 15 chr15 5898153 5898219 -97596755 - MIRm SINE MIR -2 274 210 5 630 2192 136 73 17 chr15 5898797 5899175 -97595799 - Lx LINE L1 0 6654 6254 5 630 189 0 0 0 chr15 5899175 5899196 -97595778 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5 630 2192 136 73 17 chr15 5899196 5899230 -97595744 - Lx LINE L1 -401 6253 6220 5 630 301 325 32 0 chr15 5899273 5899399 -97595575 + L1M4b LINE L1 2285 2414 -4920 5 630 497 272 51 11 chr15 5899463 5899638 -97595336 + B3A SINE B2 1 182 -16 5 630 265 270 105 26 chr15 5900912 5901064 -97593910 + L1M4b LINE L1 6296 6459 -563 5 630 613 204 92 10 chr15 5901199 5901444 -97593530 - RMER20B LTR ERVK -22 605 281 5 630 1567 192 17 34 chr15 5903178 5903469 -97591505 - RMER20B LTR ERVK -332 295 10 5 630 495 294 182 35 chr15 5903479 5903764 -97591210 - MLT1E2 LTR MaLR -161 466 140 5 630 264 312 0 0 chr15 5903845 5903925 -97591049 + L1M4b LINE L1 6478 6557 -476 5 630 282 298 12 12 chr15 5904040 5904125 -97590849 + PB1D10 SINE Alu 25 109 -8 5 630 988 256 28 46 chr15 5904528 5904917 -97590057 + Lx4B LINE L1 805 1186 -5900 5 630 1072 130 12 0 chr15 5904937 5905099 -97589875 + L1VL1 LINE L1 1 164 -6258 5 630 19093 96 4 9 chr15 5905100 5907899 -97587075 + L1Md_F2 LINE L1 2799 5585 -298 5 630 7050 93 4 12 chr15 5907900 5908902 -97586072 + L1Md_F2 LINE L1 5588 6581 -1 5 630 1073 108 0 0 chr15 5908909 5909057 -97585917 + B1_Mus1 SINE Alu 1 148 0 5 630 1238 172 8 39 chr15 5909073 5909172 -97585802 + Lx4B LINE L1 1174 1266 -5820 5 630 236 53 26 0 chr15 5909172 5909210 -97585764 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 630 1238 165 11 33 chr15 5909210 5909411 -97585563 + Lx4B LINE L1 1267 1468 -4409 5 630 12344 161 32 27 chr15 5909415 5910098 -97584876 + Lx4B LINE L1 3466 4144 -1733 5 630 843 29 0 0 chr15 5910098 5910200 -97584774 + (GGAA)n Simple_repeat Simple_repeat 4 105 0 5 630 12344 159 33 26 chr15 5910200 5911459 -97583515 + Lx4B LINE L1 4145 5405 -472 5 630 1142 148 5 23 chr15 5911459 5911674 -97583300 - Lx LINE L1 0 6654 6444 5 630 12344 157 32 22 chr15 5911674 5913300 -97581674 + Lx4B LINE L1 5406 7052 -6 5 630 26 0 0 0 chr15 5913956 5913982 -97580992 + AT_rich Low_complexity Low_complexity 1 26 0 5 630 294 124 60 30 chr15 5914528 5914628 -97580346 + (TA)n Simple_repeat Simple_repeat 2 104 0 5 630 26 50 0 0 chr15 5915104 5915144 -97579830 + AT_rich Low_complexity Low_complexity 1 40 0 5 630 274 311 10 0 chr15 5915177 5915280 -97579694 - L1M5 LINE L1 -777 5667 5564 5 630 1530 38 21 0 chr15 5915592 5915778 -97579196 - B2_Mm1t SINE B2 -1 192 3 5 630 2389 124 48 23 chr15 5916114 5916394 -97578580 + MTB_Mm LTR MaLR 1 295 -112 5 630 2715 33 0 169 chr15 5916394 5916833 -97578141 + RLTR10B2 LTR ERVK 1 365 0 5 630 2389 124 48 23 chr15 5916833 5916949 -97578025 + MTB_Mm LTR MaLR 296 407 0 5 630 649 303 31 50 chr15 5916949 5917160 -97577814 + MLT1A0 LTR MaLR 105 311 -54 5 630 378 254 17 9 chr15 5917418 5917533 -97577441 + Lx5 LINE L1 6931 7046 -4 5 630 864 76 42 8 chr15 5917820 5917932 -97577042 - L1Md_F LINE L1 -5758 761 645 5 630 5998 65 3 9 chr15 5917932 5918715 -97576259 + L1Md_F2 LINE L1 5804 6581 -1 5 630 180 243 0 0 chr15 5919186 5919260 -97575714 + CT-rich Low_complexity Low_complexity 1 74 0 5 630 648 26 0 0 chr15 5919541 5919619 -97575355 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 5 630 302 318 62 8 chr15 5920124 5920254 -97574720 + Lx8 LINE L1 6326 6462 -1011 5 630 2336 322 63 35 chr15 5920255 5920809 -97574165 - Lx8 LINE L1 -29 7444 6860 5 630 189 0 0 0 chr15 5920809 5920830 -97574144 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 5 630 2336 322 63 35 chr15 5920830 5921364 -97573610 - Lx8 LINE L1 -614 6859 6325 5 630 180 328 15 0 chr15 5921821 5921888 -97573086 + MIR3 SINE MIR 93 160 -48 5 630 319 292 31 13 chr15 5921977 5922082 -97572892 + PB1D7 SINE Alu 26 126 -21 5 630 1076 102 0 0 chr15 5922627 5922774 -97572200 + B1_Mm SINE Alu 1 147 0 5 630 1913 152 29 0 chr15 5922909 5923218 -97571756 + ORR1A3 LTR MaLR 1 318 -8 5 630 542 281 94 11 chr15 5923403 5923583 -97571391 - B3A SINE B2 0 198 4 5 630 339 25 0 0 chr15 5923928 5923968 -97571006 + (TC)n Simple_repeat Simple_repeat 1 40 0 5 630 27 0 0 0 chr15 5924082 5924109 -97570865 + AT_rich Low_complexity Low_complexity 1 27 0 5 630 777 261 184 16 chr15 5924146 5924575 -97570399 - Lx9 LINE L1 -2 7642 7142 5 630 621 352 132 31 chr15 5924679 5925218 -97569756 + L2 LINE L2 887 1479 -1940 5 630 434 272 96 17 chr15 5925348 5925588 -97569386 - MYSERV-int LTR ERVK -2131 4419 4199 5 630 307 268 38 45 chr15 5925996 5926129 -97568845 - Lx2B LINE L1 -3 6997 6866 5 630 265 89 70 56 chr15 5926143 5926176 -97568798 - L1Md_F3 LINE L1 -4 6578 6544 5 630 290 45 0 22 chr15 5926176 5926221 -97568753 + (TTA)n Simple_repeat Simple_repeat 3 46 0 5 630 297 0 0 0 chr15 5926221 5926258 -97568716 - L1Md_F3 LINE L1 -42 6542 6506 5 630 573 280 23 46 chr15 5926645 5926862 -97568112 - Lx9 LINE L1 -235 7409 7198 5 630 363 265 147 5 chr15 5926863 5927053 -97567921 + Lx9 LINE L1 7411 7627 -17 5 630 21 0 0 0 chr15 5928081 5928102 -97566872 + AT_rich Low_complexity Low_complexity 1 21 0 5 630 6876 222 55 8 chr15 5928861 5929798 -97565176 + Lx6 LINE L1 5890 6894 -566 5 630 279 0 0 0 chr15 5929798 5929829 -97565145 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 630 405 0 0 0 chr15 5929829 5929873 -97565101 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 630 6876 222 55 8 chr15 5929873 5930402 -97564572 + Lx6 LINE L1 6895 7426 -34 5 630 28 48 0 0 chr15 5930548 5930590 -97564384 + AT_rich Low_complexity Low_complexity 1 42 0 5 630 285 329 109 24 chr15 5931076 5931241 -97563733 + MER31B LTR ERV1 5 183 -283 5 630 12351 80 14 111 chr15 5932090 5934227 -97560747 - L1_Mm LINE L1 -1774 4109 2182 5 630 6511 72 1 1 chr15 5934224 5935098 -97559876 + L1Md_F2 LINE L1 3815 4688 -1195 5 630 7636 86 1 1 chr15 5935111 5937025 -97557949 + L1Md_F LINE L1 387 2301 -3582 5 630 3443 72 23 27 chr15 5937031 5937517 -97557457 + L1Md_F2 LINE L1 6098 6581 -1 5 630 6785 71 1 27 chr15 5937518 5938453 -97556521 + L1Md_F2 LINE L1 4675 5585 -298 5 630 7258 80 12 5 chr15 5938454 5939431 -97555543 + L1Md_F2 LINE L1 5587 6570 -12 5 630 390 100 0 0 chr15 5939554 5939614 -97555360 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 630 1696 273 78 137 chr15 5940372 5941706 -97553268 + RLTR22_Mur LTR ERVK 1 1322 0 5 630 2366 215 104 79 chr15 5941826 5942703 -97552271 + RLTR13D6 LTR ERVK 1 1033 0 5 630 315 247 25 25 chr15 5942991 5943070 -97551904 + polypurine Low_complexity Low_complexity 3 81 0 5 630 970 152 12 0 chr15 5943225 5943389 -97551585 - Lx9 LINE L1 -555 7089 6924 5 630 264 331 51 70 chr15 5943393 5943549 -97551425 - RLTR18 LTR ERVK -4 612 460 5 630 290 345 66 54 chr15 5943658 5943900 -97551074 - RLTR18 LTR ERVK -339 277 33 5 630 700 220 224 5 chr15 5943925 5944135 -97550839 - Lx9 LINE L1 -715 6929 6674 5 630 1782 206 45 132 chr15 5944179 5944470 -97550504 - RLTR18B LTR ERVK -6 506 249 5 630 189 0 0 0 chr15 5944470 5944491 -97550483 + (G)n Simple_repeat Simple_repeat 1 21 0 5 630 437 18 0 0 chr15 5944491 5944546 -97550428 + L1_Mus2 LINE L1 6508 6562 -4 5 630 1782 206 45 132 chr15 5944546 5944807 -97550167 - RLTR18B LTR ERVK -264 248 2 5 630 219 103 0 0 chr15 5944810 5944849 -97550125 + (A)n Simple_repeat Simple_repeat 1 39 0 5 630 450 0 0 0 chr15 5945508 5945558 -97549416 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 630 250 344 45 45 chr15 5945594 5945728 -97549246 + LTR90A LTR LTR 787 920 -56 5 630 595 288 73 24 chr15 5945985 5946231 -97548743 - Lx8 LINE L1 0 7473 7216 5 630 559 311 31 10 chr15 5947054 5947246 -97547728 - B3A SINE B2 -1 197 2 6 630 1629 144 9 67 chr15 5948138 5948480 -97546494 + RLTRETN_Mm LTR ERVK 1 322 0 6 630 30 0 0 0 chr15 5948680 5948710 -97546264 + AT_rich Low_complexity Low_complexity 1 30 0 6 630 229 319 11 32 chr15 5949614 5949708 -97545266 - L2 LINE L2 -932 2487 2396 6 630 3406 20 5 5 chr15 5950126 5950522 -97544452 - MTA_Mm LTR MaLR 0 396 1 6 630 182 385 80 5 chr15 5951625 5951826 -97543148 + L2 LINE L2 2734 2949 -470 6 630 213 119 0 0 chr15 5952033 5952075 -97542899 + (A)n Simple_repeat Simple_repeat 1 42 0 6 630 876 215 69 39 chr15 5954005 5954191 -97540783 - ORR1D1 LTR MaLR 0 374 175 6 630 549 30 0 0 chr15 5954191 5954258 -97540716 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 6 630 876 215 69 39 chr15 5954258 5954274 -97540700 - ORR1D1 LTR MaLR -200 174 166 6 630 2434 114 139 23 chr15 5954438 5954870 -97540104 - RLTR45 LTR ERVK 0 482 1 6 630 8892 131 16 10 chr15 5955031 5957293 -97537681 - L1_Mus4 LINE L1 -14 6622 4343 6 630 8563 38 2 2 chr15 5957293 5958619 -97536355 + L1Md_F2 LINE L1 4872 6117 -891 6 630 8109 38 4 1 chr15 5958620 5959610 -97535364 + L1Md_F2 LINE L1 5587 6579 -3 6 630 16538 153 16 14 chr15 5959617 5962835 -97532139 - L1VL4 LINE L1 -1525 4358 1134 6 630 538 234 29 19 chr15 5963485 5963695 -97531279 + RMER2 LTR ERV1 1 308 -259 6 630 3412 132 18 16 chr15 5963695 5964250 -97530724 + Lx2 LINE L1 6441 6996 -1 6 630 240 35 0 0 chr15 5965845 5965874 -97529100 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 630 265 301 45 66 chr15 5966425 5966628 -97528346 - HAL1b LINE L1 -370 1639 1436 6 630 800 198 178 58 chr15 5966628 5966993 -97527981 + RLTR9E LTR ERVK 1 409 0 6 630 265 301 45 66 chr15 5966993 5967031 -97527943 - HAL1b LINE L1 -574 1435 1403 6 630 821 286 38 0 chr15 5967134 5967319 -97527655 - B3 SINE B2 -13 203 12 6 630 787 319 75 61 chr15 5967569 5968063 -97526911 + MLT1D LTR MaLR 1 501 -4 6 630 1101 76 7 0 chr15 5968555 5968699 -97526275 + B1_Mm SINE Alu 1 145 -2 6 630 243 0 0 0 chr15 5968699 5968726 -97526248 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 630 25 31 0 0 chr15 5968904 5968936 -97526038 + AT_rich Low_complexity Low_complexity 1 32 0 6 630 225 0 0 0 chr15 5970014 5970039 -97524935 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 630 291 28 0 0 chr15 5970039 5970074 -97524900 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 630 213 39 0 0 chr15 5970335 5970361 -97524613 + (TTA)n Simple_repeat Simple_repeat 2 27 0 6 630 1187 34 0 7 chr15 5970361 5970507 -97524467 - B1_Mm SINE Alu -2 145 1 6 630 7806 55 5 2 chr15 5970687 5971851 -97523123 + L1_Mus1 LINE L1 5393 6557 -10 6 630 297 0 0 0 chr15 5971851 5971884 -97523090 + (TAA)n Simple_repeat Simple_repeat 1 33 0 6 630 3081 68 2 2 chr15 5972264 5972660 -97522314 - MTA_Mm LTR MaLR 0 396 1 6 630 2158 60 113 6 chr15 5972770 5973106 -97521868 + RLTR10 LTR ERVK 1 372 -18 6 630 235 261 31 0 chr15 5973694 5973759 -97521215 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 6 630 302 372 15 15 chr15 5973969 5974100 -97520874 + MLT1H1 LTR MaLR 355 485 -70 6 630 349 381 24 24 chr15 5974470 5974720 -97520254 - MIR SINE MIR 0 262 13 6 630 33 90 0 0 chr15 5974905 5974994 -97519980 + AT_rich Low_complexity Low_complexity 1 89 0 6 630 258 56 0 0 chr15 5976414 5976450 -97518524 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 630 380 20 0 20 chr15 5976450 5976500 -97518474 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 630 299 220 65 11 chr15 5977312 5977404 -97517570 + L1M5 LINE L1 4130 4226 -1920 6 630 332 206 16 69 chr15 5977638 5977826 -97517148 + (TTATA)n Simple_repeat Simple_repeat 1 178 0 6 630 2450 90 6 17 chr15 5978162 5978524 -97516450 - L1_Mus3 LINE L1 -7 6631 6274 6 630 402 291 88 35 chr15 5979580 5979725 -97515249 - MTD LTR MaLR -14 405 259 6 630 180 111 0 0 chr15 5979774 5979801 -97515173 + (C)n Simple_repeat Simple_repeat 1 27 0 6 630 201 121 0 0 chr15 5979866 5979899 -97515075 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 630 880 186 7 0 chr15 5979938 5980083 -97514891 - B1_Mus1 SINE Alu 0 148 3 6 630 1101 279 22 22 chr15 5980203 5980515 -97514459 - Lx7 LINE L1 -940 6756 6445 6 630 3679 51 20 16 chr15 5980692 5981186 -97513788 + LTRIS2 LTR ERV1 69 564 0 6 630 502 376 69 52 chr15 5981515 5981804 -97513170 - LTR16B2 LTR ERVL -155 307 14 6 630 504 333 52 22 chr15 5982041 5982271 -97512703 + MLT1B LTR MaLR 152 388 -2 6 630 200 241 17 0 chr15 5983432 5983490 -97511484 + (TA)n Simple_repeat Simple_repeat 2 60 0 6 630 1565 168 39 60 chr15 5984259 5984595 -97510379 + ORR1A4 LTR MaLR 1 329 0 6 630 369 0 0 0 chr15 5984701 5984742 -97510232 + (TC)n Simple_repeat Simple_repeat 1 41 0 6 630 384 22 0 0 chr15 5984742 5984786 -97510188 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 630 693 114 0 0 chr15 5986166 5986298 -97508676 + (CA)n Simple_repeat Simple_repeat 1 132 0 6 630 21 0 0 0 chr15 5986426 5986447 -97508527 + AT_rich Low_complexity Low_complexity 1 21 0 6 630 560 290 8 0 chr15 5986932 5987056 -97507918 - B3 SINE B2 -42 174 50 6 630 336 336 0 0 chr15 5987341 5987448 -97507526 + MLT2C1 LTR ERVL 1 107 -290 6 630 259 321 47 9 chr15 5987385 5987492 -97507482 + MLT1E3 LTR MaLR 66 176 -448 6 630 656 309 54 5 chr15 5989470 5989675 -97505299 + B3 SINE B2 1 215 -1 6 630 243 0 0 0 chr15 5991608 5991635 -97503339 + (GAA)n Simple_repeat Simple_repeat 1 27 0 6 630 2925 91 32 0 chr15 5992878 5993287 -97501687 - BGLII_Mus LTR ERVK 0 422 1 6 630 287 305 50 85 chr15 5993360 5993618 -97501356 - L1ME1 LINE L1 -12 6167 5919 6 630 1567 218 51 8 chr15 5993619 5993823 -97501151 - ORR1B2 LTR MaLR 0 367 153 6 630 657 79 0 0 chr15 5993823 5993924 -97501050 + (GA)n Simple_repeat Simple_repeat 2 102 0 6 630 1567 218 51 8 chr15 5993924 5994071 -97500903 - ORR1B2 LTR MaLR -215 152 2 6 630 447 179 65 9 chr15 5994091 5994198 -97500776 - BC1_Mm scRNA scRNA -39 113 1 6 630 326 252 88 29 chr15 5994203 5994305 -97500669 - PB1D10 SINE Alu -7 110 3 6 630 1151 174 34 134 chr15 5994425 5994783 -97500191 - RLTRETN_Mm LTR ERVK 0 322 1 6 630 573 200 78 14 chr15 5994783 5994925 -97500049 - ETnERV-int LTR ERVK 0 3314 3164 6 630 273 251 204 21 chr15 5994925 5995116 -97499858 - RLTR13D6 LTR ERVK -461 441 216 6 630 742 164 16 28 chr15 5995062 5995214 -97499760 + RLTRETN_Mm LTR ERVK 190 409 0 6 630 494 224 31 39 chr15 5995335 5995465 -97499509 + RSINE1 SINE B4 4 132 -33 6 630 231 36 0 0 chr15 5995474 5995502 -97499472 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 6 630 1253 164 50 8 chr15 5996231 5996471 -97498503 + Lx4B LINE L1 6747 6996 -62 6 630 287 324 28 17 chr15 5996480 5996659 -97498315 - L1ME1 LINE L1 -605 5569 5389 6 630 250 250 60 20 chr15 5996741 5996892 -97498082 - L1MC LINE L1 -846 5300 5144 6 630 276 261 88 73 chr15 5996895 5997058 -97497916 - MIRb SINE MIR -64 204 37 6 630 2000 126 3 16 chr15 5997070 5997385 -97497589 - RLTR10E LTR ERVK 0 311 1 6 630 295 287 122 15 chr15 5997577 5997782 -97497192 + L1MA9 LINE L1 6076 6302 -10 6 630 225 274 0 0 chr15 5997868 5997930 -97497044 - Charlie10 DNA MER1_type -2456 366 305 6 630 5941 100 57 0 chr15 5998849 6000000 -97494974 + L1VL2 LINE L1 94 1304 -2311 6 630 14463 90 24 25 chr15 6000000 6002275 -97492699 + MusHAL1 LINE L1 402 2673 -39 1 630 26 50 0 0 chr15 6003123 6003163 -97491811 + AT_rich Low_complexity Low_complexity 1 40 0 2 630 338 339 8 39 chr15 6003191 6003320 -97491654 - RSINE1 SINE B4 -32 133 9 3 630 183 42 0 0 chr15 6004833 6004857 -97490117 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 4 630 405 0 0 0 chr15 6004858 6004903 -97490071 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 5 630 837 45 0 51 chr15 6004903 6005021 -97489953 - B1_Mus2 SINE Alu -10 137 26 6 630 23 0 0 0 chr15 6005598 6005621 -97489353 + AT_rich Low_complexity Low_complexity 1 23 0 7 630 389 321 65 18 chr15 6005767 6005935 -97489039 + MLT1A0 LTR MaLR 54 229 -136 8 630 248 14 111 42 chr15 6006130 6006202 -97488772 + (GTTTG)n Simple_repeat Simple_repeat 2 78 0 9 630 1824 109 47 28 chr15 6006357 6006368 -97488606 + Lx2 LINE L1 6517 6527 -470 1 630 872 105 52 0 chr15 6006368 6006521 -97488453 - Lx LINE L1 0 6654 6494 1 630 1824 109 47 28 chr15 6006521 6006831 -97488143 + Lx2 LINE L1 6528 6843 -154 1 630 893 72 0 0 chr15 6007322 6007447 -97487527 - L1_Mus1 LINE L1 -1 6566 6442 1 630 768 22 0 0 chr15 6007799 6007889 -97487085 + (TC)n Simple_repeat Simple_repeat 1 90 0 1 630 398 36 18 0 chr15 6008214 6008270 -97486704 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 630 1297 317 124 4 chr15 6008271 6008809 -97486165 + Lx9 LINE L1 6358 6960 -684 1 630 3526 144 75 48 chr15 6011172 6011812 -97483162 - Lx4A LINE L1 0 7058 6402 1 630 244 164 74 7 chr15 6011881 6012016 -97482958 + (TA)n Simple_repeat Simple_repeat 1 144 0 1 630 530 331 28 11 chr15 6012019 6012306 -97482668 - L1MA5 LINE L1 -418 5882 5591 1 630 234 229 95 60 chr15 6012624 6012740 -97482234 + FordPrefect DNA Tip100 1460 1579 -104 1 630 1383 276 81 55 chr15 6012806 6013426 -97481548 + Lx8 LINE L1 6820 7455 -18 2 630 556 154 171 0 chr15 6014397 6014514 -97480460 + B1_Mm SINE Alu 10 146 -1 2 630 620 312 109 9 chr15 6014738 6015068 -97479906 - Zaphod DNA Tip100 -5 4026 3664 2 630 298 181 157 28 chr15 6015896 6016004 -97478970 + Lx9 LINE L1 7371 7492 -152 2 630 874 164 48 53 chr15 6016021 6016208 -97478766 + RMER19B LTR ERVK 305 490 -412 2 630 239 79 0 26 chr15 6017280 6017319 -97477655 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2 630 279 317 73 90 chr15 6018927 6019104 -97475870 + B4A SINE B4 48 221 -71 2 630 21 57 0 0 chr15 6020343 6020378 -97474596 + AT_rich Low_complexity Low_complexity 1 35 0 2 630 860 234 85 22 chr15 6020888 6021159 -97473815 + Lx8 LINE L1 6132 6419 -1054 2 630 469 268 44 121 chr15 6021660 6021827 -97473147 + B1F SINE Alu 6 311 0 2 630 332 317 0 0 chr15 6022672 6022776 -97472198 - MLT1B LTR MaLR 0 390 287 3 630 331 345 26 65 chr15 6024103 6024258 -97470716 + MLT1N2 LTR MaLR 26 174 -388 3 630 3596 59 0 2 chr15 6024286 6024851 -97470123 - L1Md_F2 LINE L1 -554 6028 5465 3 630 3977 69 10 2 chr15 6024851 6025374 -97469600 + L1Md_F2 LINE L1 6056 6582 0 3 630 518 224 26 26 chr15 6025398 6025549 -97469425 - Charlie2b DNA MER1_type -705 2077 1927 3 630 268 301 0 0 chr15 6025541 6025624 -97469350 + Charlie2b DNA MER1_type 1852 1934 -848 3 630 255 281 0 33 chr15 6025621 6025713 -97469261 - Charlie2b DNA MER1_type -993 1789 1701 3 630 425 313 61 8 chr15 6025928 6026060 -97468914 - RSINE1 SINE B4 0 165 27 3 630 552 238 32 0 chr15 6026540 6026666 -97468308 + Lx6 LINE L1 6530 6659 -801 3 630 2390 84 9 3 chr15 6026697 6027031 -97467943 - L1_Mus3 LINE L1 -3 6635 6300 3 630 1261 80 0 6 chr15 6027031 6027202 -97467772 + L1_Mus3 LINE L1 5931 6100 -538 3 630 733 339 17 50 chr15 6027254 6027555 -97467419 + B4 SINE B4 2 292 0 3 630 354 224 92 0 chr15 6027631 6027729 -97467245 + L1M LINE L1 5317 5423 -757 3 630 510 316 142 27 chr15 6027721 6028128 -97466846 - L1MB5 LINE L1 -315 5859 5406 4 630 212 304 86 20 chr15 6028563 6028684 -97466290 - L2a LINE L2 -342 3084 2958 4 78 3766 63 0 4 chr15 6029239 6029719 -97465255 - L1Md_F2 LINE L1 -12 6570 6093 4 631 692 279 96 61 chr15 6030099 6030443 -97464531 - ORR1D2 LTR MaLR -14 356 1 4 631 288 0 0 0 chr15 6030555 6030587 -97464387 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 631 426 289 40 20 chr15 6031440 6031592 -97463382 - LTR82B Low_complexity ERVL -118 712 558 4 631 264 240 69 88 chr15 6031461 6031621 -97463353 - LTR82A LTR ERVL -128 744 588 4 631 374 0 22 0 chr15 6032263 6032309 -97462665 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 631 859 302 65 5 chr15 6032423 6032806 -97462168 - L1M3 LINE L1 -1000 5140 4735 4 631 225 313 20 10 chr15 6033141 6033241 -97461733 + (CATA)n Simple_repeat Simple_repeat 4 104 0 4 631 723 294 60 20 chr15 6033248 6033598 -97461376 + L1MA9 LINE L1 5413 5776 -536 5 631 336 282 133 58 chr15 6033695 6033921 -97461053 + L1MA9 LINE L1 5766 6008 -304 5 631 1651 83 0 36 chr15 6033996 6034246 -97460728 - ORR1A2 LTR MaLR -86 241 1 5 631 3457 20 2 0 chr15 6035174 6035569 -97459405 - MTA_Mm LTR MaLR 0 396 1 5 631 9351 25 2 1 chr15 6035569 6036666 -97458308 - MTA_Mm-int LTR MaLR 0 1098 1 5 631 3457 20 2 0 chr15 6036666 6037061 -97457913 - MTA_Mm LTR MaLR 0 396 1 5 631 811 354 55 14 chr15 6037132 6037476 -97457498 - Lx8 LINE L1 -173 7300 6943 5 631 356 326 61 7 chr15 6037527 6037675 -97457299 - Lx8 LINE L1 -633 6840 6685 5 631 991 210 36 16 chr15 6037677 6037924 -97457050 + L1_Mur3 LINE L1 4387 4638 -1242 5 631 1164 54 0 0 chr15 6038848 6038996 -97455978 + (GAAA)n Simple_repeat Simple_repeat 1 148 0 5 631 7987 112 45 9 chr15 6039346 6041284 -97453690 + L1_Mus3 LINE L1 4635 6638 0 5 631 666 37 0 0 chr15 6041365 6041446 -97453528 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 5 631 2496 113 118 3 chr15 6041483 6041873 -97453101 - RLTR10C LTR ERVK -1 435 1 5 631 480 217 167 0 chr15 6041923 6042043 -97452931 + B1_Mus2 SINE Alu 1 140 -7 5 631 209 167 42 0 chr15 6042056 6042104 -97452870 + GA-rich Low_complexity Low_complexity 2 51 0 6 631 371 288 85 34 chr15 6042206 6042382 -97452592 + MIR SINE MIR 76 260 -2 6 631 6670 83 2 5 chr15 6042605 6043526 -97451448 - L1_Mus1 LINE L1 -640 5243 4326 6 631 7235 78 9 4 chr15 6043536 6044851 -97450123 + L1_Mus1 LINE L1 5249 6567 0 6 631 1809 166 6 55 chr15 6045296 6045640 -97449334 + ORR1A2 LTR MaLR 1 327 0 6 631 379 326 15 8 chr15 6045676 6045809 -97449165 + ID_B1 SINE B4 91 224 0 6 631 422 249 214 21 chr15 6045815 6045987 -97448987 + B3A SINE B2 12 211 -5 6 631 286 301 27 0 chr15 6046028 6046101 -97448873 + ID4_ SINE ID 6 80 -3 6 631 561 204 224 17 chr15 6047824 6048003 -97446971 + B3 SINE B2 1 216 0 6 631 252 286 14 14 chr15 6048307 6048378 -97446596 - tRNA-Ala-GCY_ tRNA tRNA -3 72 2 6 631 277 187 13 13 chr15 6048784 6048860 -97446114 + CT-rich Low_complexity Low_complexity 4 79 0 6 631 511 358 7 7 chr15 6049356 6049508 -97445466 + RSINE1 SINE B4 8 159 -6 7 631 410 316 43 35 chr15 6049697 6049838 -97445136 - MLT1A1 LTR MaLR -2 406 265 7 631 1804 162 102 11 chr15 6050408 6050769 -97444205 - ORR1B1 LTR MaLR 0 394 1 7 631 21 0 0 0 chr15 6051092 6051113 -97443861 + AT_rich Low_complexity Low_complexity 1 21 0 7 631 937 89 0 100 chr15 6051122 6051272 -97443702 + B1_Mus2 SINE Alu 1 135 -12 7 631 474 18 0 0 chr15 6051272 6051327 -97443647 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 7 631 196 383 106 21 chr15 6051329 6051812 -97443162 + L2 LINE L2 1507 2030 -1389 7 631 185 0 40 0 chr15 6052014 6052039 -97442935 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7 631 249 272 83 42 chr15 6052324 6052420 -97442554 + L2a LINE L2 3265 3364 -62 7 631 219 192 13 27 chr15 6053193 6053268 -97441706 + CT-rich Low_complexity Low_complexity 2 75 0 7 631 22 35 0 0 chr15 6053401 6053430 -97441544 + AT_rich Low_complexity Low_complexity 1 29 0 8 631 24 0 0 0 chr15 6053687 6053711 -97441263 + AT_rich Low_complexity Low_complexity 1 24 0 8 631 21 36 0 0 chr15 6053734 6053762 -97441212 + AT_rich Low_complexity Low_complexity 1 28 0 8 631 3046 298 83 26 chr15 6053808 6054981 -97439993 - Lx8 LINE L1 -1 7472 6233 8 631 303 159 42 25 chr15 6056291 6056365 -97438609 - MTE2a LTR MaLR 0 379 312 8 631 699 310 53 44 chr15 6056401 6056706 -97438268 - MTE2a LTR MaLR -57 322 1 8 631 3376 62 39 0 chr15 6057155 6057588 -97437386 + L1_Mus1 LINE L1 6055 6504 -63 8 631 1528 53 5 19 chr15 6057589 6057800 -97437174 - MTA_Mm LTR MaLR 0 396 189 8 631 252 133 0 0 chr15 6057792 6057837 -97437137 - MT2C_Mm LTR ERVL -145 330 286 8 631 396 125 0 0 chr15 6057839 6057903 -97437071 + (GA)n Simple_repeat Simple_repeat 1 64 0 8 631 2212 68 27 0 chr15 6057903 6058198 -97436776 - MT2C_Mm LTR ERVL -172 303 1 8 631 468 47 0 0 chr15 6058198 6058262 -97436712 + L1_Mus2 LINE L1 6503 6566 0 8 631 32467 82 4 8 chr15 6058271 6063365 -97431609 + L1Md_F2 LINE L1 515 5586 -297 9 631 7828 63 1 1 chr15 6063365 6064359 -97430615 + L1Md_F2 LINE L1 5587 6580 -2 9 631 23 54 0 0 chr15 6064858 6064895 -97430079 + AT_rich Low_complexity Low_complexity 1 37 0 9 631 5702 59 45 18 chr15 6064943 6065722 -97429252 - L1_Mus2 LINE L1 -1 6565 5766 9 631 1327 42 24 0 chr15 6065725 6065892 -97429082 + L1_Mus2 LINE L1 5587 5757 -809 9 631 343 267 12 118 chr15 6067483 6067568 -97427406 + Lx8 LINE L1 6640 6723 -750 9 631 442 349 51 17 chr15 6067710 6068103 -97426871 - L1M4c LINE L1 -1408 4974 4564 9 631 633 38 0 0 chr15 6068175 6068255 -97426719 + (TG)n Simple_repeat Simple_repeat 1 80 0 9 631 378 0 0 0 chr15 6068255 6068296 -97426678 + (GA)n Simple_repeat Simple_repeat 1 42 0 9 631 533 284 189 49 chr15 6068320 6068690 -97426284 - Lx9 LINE L1 -203 7441 7020 9 631 854 295 137 18 chr15 6068829 6069509 -97425465 - L1M4c LINE L1 -1977 4399 3639 9 631 341 323 10 10 chr15 6069686 6069783 -97425191 + PB1D10 SINE Alu 21 117 0 9 631 623 261 103 72 chr15 6069786 6070289 -97424685 - L1M4c LINE L1 -2790 3592 3074 9 631 334 274 66 0 chr15 6070362 6070468 -97424506 + PB1D7 SINE Alu 1 113 -7 9 631 445 278 62 76 chr15 6070591 6070879 -97424095 - L1M4c LINE L1 -3609 2773 2490 9 631 438 305 87 44 chr15 6070937 6071631 -97423343 - L1M4c LINE L1 -3903 2481 1662 9 631 640 271 39 63 chr15 6071985 6072190 -97422784 + RMER30 DNA MER1_type 2 201 -1 1 631 226 350 24 16 chr15 6074266 6074391 -97420583 - MER110 LTR ERV1 -5 486 361 1 631 513 293 151 47 chr15 6075063 6075382 -97419592 - ORR1E LTR MaLR -4 355 4 1 631 260 347 59 39 chr15 6075453 6075606 -97419368 + MLT1C LTR MaLR 310 465 -2 1 631 1531 191 202 6 chr15 6075927 6076279 -97418695 - MTC LTR MaLR 0 421 1 1 631 548 214 0 0 chr15 6076609 6076707 -97418267 + B1_Mur3 SINE Alu 47 144 -5 1 631 339 404 110 21 chr15 6079185 6079466 -97415508 - MLT1J2 LTR MaLR -131 317 12 1 631 386 239 54 0 chr15 6080296 6080388 -97414586 - MTE2b LTR MaLR -1 378 282 1 631 407 19 0 19 chr15 6080413 6080466 -97414508 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 631 602 306 7 34 chr15 6080466 6080615 -97414359 - MTE2b LTR MaLR -213 166 22 1 631 299 323 79 20 chr15 6080838 6080939 -97414035 + PB1D10 SINE Alu 10 116 -1 1 631 347 301 60 53 chr15 6081086 6081237 -97413737 + Charlie7 DNA MER1_type 1712 1863 -749 1 631 624 275 174 46 chr15 6081296 6081711 -97413263 + MLT2B2 LTR ERVL 3 470 -45 1 631 2006 282 79 70 chr15 6081774 6082672 -97412302 + Lx8 LINE L1 6542 7456 -17 1 631 267 31 0 0 chr15 6082955 6082987 -97411987 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 631 480 111 0 0 chr15 6082987 6083059 -97411915 + (TA)n Simple_repeat Simple_repeat 2 73 0 1 631 599 299 68 0 chr15 6083075 6083222 -97411752 - B3A SINE B2 -38 160 4 1 631 1382 212 80 44 chr15 6083223 6083584 -97411390 + ORR1D1 LTR MaLR 1 374 0 1 631 1604 41 0 10 chr15 6084235 6084430 -97410544 + B2_Mm1a SINE B2 1 193 0 1 631 2577 95 95 91 chr15 6085087 6085572 -97409402 - RLTR1C LTR ERV1 -16 487 1 1 631 716 33 11 0 chr15 6085585 6085676 -97409298 + (TC)n Simple_repeat Simple_repeat 1 92 0 1 631 351 0 0 0 chr15 6085676 6085714 -97409260 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 631 4843 162 65 37 chr15 6085735 6086691 -97408283 + RLTR13C1 LTR ERVK 1 983 0 1 631 5936 72 19 1 chr15 6086790 6087599 -97407375 + RLTR22_Mus LTR ERVK 1 823 -985 1 631 290 312 78 69 chr15 6087857 6088074 -97406900 + RMER12 LTR ERVK 1104 1322 0 1 631 195 167 0 0 chr15 6088602 6088644 -97406330 + (CATA)n Simple_repeat Simple_repeat 1 42 0 1 631 4370 161 7 13 chr15 6088727 6089496 -97405478 + L1_Mus1 LINE L1 380 1143 -5473 1 631 27635 104 7 1 chr15 6089468 6094339 -97400635 + L1_Mus1 LINE L1 1668 6567 0 1 631 1208 254 135 6 chr15 6094603 6094959 -97400015 + MTD LTR MaLR 18 419 0 1 631 433 239 72 66 chr15 6094961 6095113 -97399861 + MTD-int LTR MaLR 3 155 -1215 1 631 976 307 45 51 chr15 6095683 6096019 -97398955 + MTD-int LTR MaLR 306 639 -619 1 631 537 16 0 0 chr15 6096732 6096794 -97398180 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 631 458 188 0 24 chr15 6097181 6097345 -97397629 + (TG)n Simple_repeat Simple_repeat 2 161 0 1 631 26 0 0 0 chr15 6098098 6098124 -97396850 + AT_rich Low_complexity Low_complexity 1 26 0 1 631 2522 58 3 0 chr15 6099155 6099611 -97395363 + L1Md_F2 LINE L1 6256 6582 0 1 631 191 258 63 16 chr15 6099642 6099705 -97395269 + L2a LINE L2 3360 3425 -1 1 631 1788 253 102 26 chr15 6100243 6101042 -97393932 - RMER1B Other Other 0 1066 46 1 631 402 350 67 11 chr15 6101417 6101596 -97393378 - B3A SINE B2 -9 189 1 1 631 1291 213 14 22 chr15 6101640 6101918 -97393056 - Lx6 LINE L1 -5 7455 7180 1 631 275 200 100 0 chr15 6101928 6101988 -97392986 + U1 snRNA snRNA 8 73 -92 1 631 235 153 0 48 chr15 6102824 6102886 -97392088 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 1 631 392 349 53 0 chr15 6102924 6103056 -97391918 - ID_B1 SINE B4 0 224 86 1 631 360 232 0 0 chr15 6103099 6103168 -97391806 + ID4 SINE ID 6 74 -9 1 631 637 310 45 5 chr15 6103143 6103341 -97391633 + MER58A DNA MER1_type 19 224 0 1 631 4978 62 0 8 chr15 6103522 6104175 -97390799 + L1Md_F2 LINE L1 5934 6581 -1 1 631 527 271 31 0 chr15 6104278 6104407 -97390567 + B4 SINE B4 1 133 -159 1 631 382 346 32 25 chr15 6105266 6105550 -97389424 - L1M2 LINE L1 -961 5182 4897 1 631 450 0 0 0 chr15 6105641 6105691 -97389283 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 631 237 277 0 12 chr15 6105702 6105786 -97389188 - L1M2 LINE L1 -3587 2556 2474 1 631 565 309 131 38 chr15 6105764 6106802 -97388172 - L1_Mur3 LINE L1 -3434 2446 1312 1 631 240 35 0 0 chr15 6107077 6107106 -97387868 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1 631 458 279 119 18 chr15 6107405 6107682 -97387292 - L1MB8 LINE L1 -3 6175 5871 1 631 337 342 32 0 chr15 6107694 6107849 -97387125 - L1MB8 LINE L1 -445 5739 5580 1 631 356 301 85 5 chr15 6107886 6108110 -97386864 + L1MA7 LINE L1 6043 6284 -7 1 631 298 259 131 29 chr15 6108277 6108452 -97386522 - L1MB8 LINE L1 -1287 4859 4667 1 631 500 333 65 112 chr15 6109037 6109439 -97385535 + MLT1C LTR MaLR 7 466 -1 1 631 252 341 59 70 chr15 6109638 6109909 -97385065 - L3 LINE CR1 -83 4406 4139 1 631 797 239 62 59 chr15 6110667 6110956 -97384018 + MER45B DNA Tip100 722 1011 -29 1 631 3399 75 2 24 chr15 6111080 6111543 -97383431 + L1_Mus2 LINE L1 6114 6566 0 1 631 315 0 0 0 chr15 6113473 6113508 -97381466 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 631 1577 119 0 8 chr15 6114466 6114712 -97380262 - Lx2B LINE L1 -274 6726 6483 1 631 1187 136 54 5 chr15 6114730 6114951 -97380023 + Lx2B LINE L1 6759 6990 -10 1 631 1080 83 14 0 chr15 6115231 6115376 -97379598 + B1_Mus1 SINE Alu 2 148 0 1 631 6352 71 3 5 chr15 6115508 6116397 -97378577 - L1Md_F2 LINE L1 0 6582 5695 1 631 249 49 24 0 chr15 6116403 6116444 -97378530 + tRNA-Pro-CCY tRNA tRNA 1 42 -33 1 631 620 179 0 0 chr15 6116605 6116711 -97378263 - MTB_Mm LTR MaLR -283 124 19 1 631 306 330 57 0 chr15 6116947 6117053 -97377921 - PB1D10 SINE Alu -5 112 1 1 631 272 226 0 19 chr15 6117053 6117103 -97377871 - ID SINE ID -174 50 2 1 631 1566 38 16 0 chr15 6118166 6118352 -97376622 - B2_Mm1t SINE B2 -4 189 1 1 631 44 56 0 0 chr15 6120195 6120267 -97374707 + AT_rich Low_complexity Low_complexity 1 72 0 1 631 272 312 0 0 chr15 6120295 6120391 -97374583 - L1M2 LINE L1 -548 5752 5657 1 631 330 244 130 31 chr15 6120383 6120637 -97374337 - L1M2 LINE L1 -757 5386 5108 1 631 371 285 109 0 chr15 6121638 6121775 -97373199 - MER2 DNA MER2_type -35 310 159 1 631 2150 280 21 3 chr15 6122007 6122580 -97372394 + Lx8 LINE L1 6550 7132 -341 1 631 290 274 93 27 chr15 6122618 6122768 -97372206 + Lx8 LINE L1 7312 7471 -2 1 631 544 204 20 0 chr15 6122776 6122874 -97372100 + B1_Mur3 SINE Alu 45 144 -5 1 631 288 0 0 0 chr15 6122882 6122914 -97372060 + (CATA)n Simple_repeat Simple_repeat 2 33 0 1 631 246 218 0 18 chr15 6123102 6123158 -97371816 + B4A SINE B4 2 56 -236 1 631 260 377 25 19 chr15 6123393 6123555 -97371419 + MIRb SINE MIR 32 194 -74 1 631 269 103 0 0 chr15 6123912 6123970 -97371004 - L1_Mm LINE L1 -3827 2056 1999 1 631 5206 31 3 0 chr15 6123970 6124583 -97370391 + L1Md_F3 LINE L1 5956 6570 -14 1 631 251 375 35 26 chr15 6125988 6126103 -97368871 + PB1D10 SINE Alu 1 116 -1 1 631 331 301 100 5 chr15 6126110 6126310 -97368664 + L1MC LINE L1 5599 5817 -527 1 631 502 241 19 0 chr15 6126327 6126435 -97368539 + PB1D7 SINE Alu 3 112 -8 1 631 362 185 0 12 chr15 6126447 6126529 -97368445 + GA-rich Low_complexity Low_complexity 1 81 0 1 631 335 330 0 0 chr15 6126555 6126652 -97368322 + ID_B1 SINE B4 82 178 -46 1 631 5612 150 29 6 chr15 6126734 6127671 -97367303 + RMER17B LTR ERVK 1 958 0 1 631 1677 147 3 0 chr15 6127841 6128140 -97366834 + Lx5 LINE L1 4974 5273 -607 1 631 2841 156 88 16 chr15 6128140 6128654 -97366320 - RMER4B LTR ERVK 0 585 32 1 631 3470 166 57 17 chr15 6128654 6129290 -97365684 - Lx5 LINE L1 -3 7047 6387 1 631 2841 156 88 16 chr15 6129290 6129321 -97365653 - RMER4B LTR ERVK -554 31 1 1 631 3135 245 43 70 chr15 6129323 6131043 -97363931 + Lx5 LINE L1 5270 6932 -118 1 631 246 27 0 0 chr15 6131139 6131176 -97363798 - L1Md_F3 LINE L1 -16 6568 6532 1 631 192 77 0 0 chr15 6131289 6131315 -97363659 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 631 251 141 0 196 chr15 6131967 6132064 -97362910 + Lx8 LINE L1 6467 6544 -929 1 631 659 12 0 0 chr15 6132418 6132501 -97362473 + L1Md_T LINE L1 6500 6582 0 1 631 266 220 0 48 chr15 6132642 6132704 -97362270 + B3 SINE B2 1 59 -157 1 631 5598 63 18 3 chr15 6132765 6133484 -97361490 - L1_Mus2 LINE L1 -1 6565 5836 1 631 740 322 48 34 chr15 6133776 6134188 -97360786 + Lx8 LINE L1 7056 7473 0 1 631 201 290 16 0 chr15 6134759 6134821 -97360153 + CT-rich Low_complexity Low_complexity 1 63 0 1 631 418 170 11 11 chr15 6134863 6134958 -97360016 + (TA)n Simple_repeat Simple_repeat 1 95 0 1 631 199 222 0 0 chr15 6135080 6135116 -97359858 + MIRb SINE MIR 201 236 -32 1 631 216 250 24 12 chr15 6135171 6135256 -97359718 + (TA)n Simple_repeat Simple_repeat 1 86 0 1 631 270 296 0 27 chr15 6135264 6135337 -97359637 - ID4 SINE ID -1 82 12 1 631 292 328 42 25 chr15 6135347 6135466 -97359508 - MIRb SINE MIR -92 176 56 1 631 1362 56 0 0 chr15 6136879 6137059 -97357915 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 631 1500 247 126 13 chr15 6137363 6137831 -97357143 - RLTR11A2 LTR ERVK 0 527 7 1 631 716 285 6 23 chr15 6138014 6138099 -97356875 + B4 SINE B4 2 83 -209 1 631 298 318 45 18 chr15 6138099 6138211 -97356763 + PB1D9 SINE Alu 1 115 -5 1 631 417 270 78 24 chr15 6138475 6138642 -97356332 + B3A SINE B2 22 197 -1 1 631 325 333 0 44 chr15 6138860 6138951 -97356023 + PB1D10 SINE Alu 1 87 -30 1 631 208 341 50 29 chr15 6139214 6139353 -97355621 - MIRb SINE MIR -18 250 109 1 631 1126 270 44 28 chr15 6139869 6140189 -97354785 - ORR1E-int LTR MaLR -194 1386 1062 2 631 1436 233 79 24 chr15 6140217 6140246 -97354728 + MTD LTR MaLR 31 56 -363 2 631 1808 162 0 60 chr15 6140246 6140593 -97354381 + ORR1A3 LTR MaLR 1 326 0 2 631 1436 233 79 24 chr15 6140593 6140932 -97354042 + MTD LTR MaLR 57 419 0 2 631 429 255 9 47 chr15 6140937 6141044 -97353930 - ORR1E-int LTR MaLR -1474 106 4 2 631 379 279 156 64 chr15 6141052 6141378 -97353596 - ORR1E LTR MaLR -2 357 2 2 631 1494 85 9 18 chr15 6142767 6142988 -97351986 - L1Md_F2 LINE L1 -6 6576 6356 2 631 2935 33 185 0 chr15 6142988 6143356 -97351618 - RLTR10C LTR ERVK 0 436 1 2 631 7599 36 3 0 chr15 6143361 6144289 -97350685 - MMERVK10C-int LTR ERVK -5 7576 6646 2 631 40129 38 0 1 chr15 6144275 6149219 -97345755 - MMERVK10C-int LTR ERVK -1771 5810 870 2 631 2480 98 53 3 chr15 6149217 6149597 -97345377 - MMERVK10C-int LTR ERVK -7182 399 1 2 631 2948 30 185 0 chr15 6149597 6149965 -97345009 - RLTR10C LTR ERVK 0 436 1 2 631 32583 75 6 3 chr15 6149985 6152983 -97341991 - L1Md_F2 LINE L1 -231 6351 3339 2 631 234 0 0 0 chr15 6152983 6153009 -97341965 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 2 631 32583 93 14 2 chr15 6153009 6156041 -97338933 - L1Md_F2 LINE L1 -2545 3338 277 2 631 1472 147 4 8 chr15 6156041 6156288 -97338686 - L1VL1 LINE L1 -6156 266 21 2 631 704 273 352 11 chr15 6156878 6157156 -97337818 + RMER5 LTR ERV1 80 452 -82 2 631 335 25 0 0 chr15 6158885 6158925 -97336049 - MT2_Mm LTR ERVL 0 493 454 2 631 180 0 0 0 chr15 6158925 6158945 -97336029 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 631 580 285 86 25 chr15 6158952 6159150 -97335824 - MT2B LTR ERVL -391 210 1 2 631 257 237 118 42 chr15 6159150 6159179 -97335795 - ORR1A3-int LTR MaLR -1348 615 578 2 631 909 89 0 20 chr15 6159290 6159439 -97335535 + (GGAA)n Simple_repeat Simple_repeat 4 149 0 2 631 2311 145 42 15 chr15 6159887 6160293 -97334681 + MTC LTR MaLR 5 421 0 2 78 191 306 108 27 chr15 6160296 6160407 -97334567 + MIRb SINE MIR 139 258 -10 2 632 362 354 55 38 chr15 6160534 6160880 -97334094 - L1ME2 LINE L1 -4 6160 5809 2 632 23 33 0 0 chr15 6160991 6161021 -97333953 + AT_rich Low_complexity Low_complexity 1 30 0 2 632 369 311 86 36 chr15 6161488 6161708 -97333266 - L1M4 LINE L1 -1099 5047 4817 2 632 3047 23 0 6 chr15 6162183 6162539 -97332435 - L1Md_F2 LINE L1 0 6582 6229 2 632 561 83 0 0 chr15 6162539 6162623 -97332351 + MusHAL1 LINE L1 1807 1890 -822 2 632 594 126 0 0 chr15 6162722 6162825 -97332149 + (TG)n Simple_repeat Simple_repeat 1 103 0 2 632 430 294 31 8 chr15 6162825 6162952 -97332022 - RSINE1 SINE B4 -24 141 12 2 632 29 0 0 0 chr15 6163184 6163213 -97331761 + AT_rich Low_complexity Low_complexity 1 29 0 2 632 402 324 5 0 chr15 6163399 6163601 -97331373 + Lx8 LINE L1 6998 7212 -261 2 632 391 87 0 28 chr15 6163667 6163738 -97331236 + (TTTA)n Simple_repeat Simple_repeat 3 71 0 2 632 1868 211 86 27 chr15 6163876 6164402 -97330572 - RLTR31_Mm LTR ERVK -3 558 2 2 632 423 186 0 0 chr15 6164446 6164543 -97330431 + (TG)n Simple_repeat Simple_repeat 1 97 0 2 632 40 37 0 0 chr15 6164694 6164748 -97330226 + AT_rich Low_complexity Low_complexity 1 54 0 2 632 367 229 51 29 chr15 6165037 6165151 -97329823 - B1F SINE Alu -1 149 33 2 632 242 363 39 10 chr15 6165504 6165607 -97329367 + PB1D10 SINE Alu 4 109 -8 2 632 25 0 0 0 chr15 6165613 6165638 -97329336 + AT_rich Low_complexity Low_complexity 1 25 0 2 632 1005 67 0 0 chr15 6166402 6166536 -97328438 + (TAGA)n Simple_repeat Simple_repeat 3 136 0 2 632 1032 99 97 28 chr15 6167521 6167688 -97327286 + B2_Mm2 SINE B2 3 183 -12 2 632 234 0 0 0 chr15 6167688 6167714 -97327260 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 632 906 146 5 53 chr15 6168032 6168220 -97326754 - L1Md_F2 LINE L1 -1 6581 6403 2 632 330 287 0 47 chr15 6169035 6169141 -97325833 + PB1D10 SINE Alu 10 110 -7 2 632 1876 62 33 0 chr15 6169352 6169592 -97325382 + L1_Mus1 LINE L1 6320 6567 0 2 632 215 381 42 0 chr15 6169625 6169762 -97325212 - MIR SINE MIR -44 224 74 2 632 261 295 13 0 chr15 6169776 6169854 -97325120 + PB1D10 SINE Alu 38 116 -1 2 632 189 0 0 0 chr15 6169856 6169877 -97325097 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 2 632 227 265 32 57 chr15 6170017 6170141 -97324833 - Lx7 LINE L1 -1 7695 7575 2 632 1413 229 146 24 chr15 6170141 6170727 -97324247 - Lx7 LINE L1 -233 7463 6807 2 632 1161 119 22 17 chr15 6171422 6171601 -97323373 + B2_Mm2 SINE B2 2 181 -14 2 632 335 292 83 0 chr15 6171624 6171720 -97323254 + PB1D10 SINE Alu 9 112 -5 2 632 405 314 93 17 chr15 6171916 6172088 -97322886 - MER2 DNA MER2_type 0 345 161 2 632 612 246 0 8 chr15 6173022 6173153 -97321821 + B1_Mur1 SINE Alu 1 130 -19 2 632 242 56 28 0 chr15 6173157 6173193 -97321781 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 2 632 3363 71 0 9 chr15 6174113 6174554 -97320420 + L1_Mus2 LINE L1 6130 6566 0 2 632 605 139 8 0 chr15 6174625 6174747 -97320227 + (GA)n Simple_repeat Simple_repeat 2 124 0 2 632 3172 31 2 52 chr15 6176126 6176534 -97318440 + RLTR10 LTR ERVK 1 388 -2 2 632 8188 41 15 8 chr15 6176536 6177527 -97317447 + RLTR10-int LTR ERVK 1 998 -989 2 632 373 271 31 8 chr15 6177591 6177721 -97317253 + RLTR10-int LTR ERVK 1462 1594 -5987 2 632 9050 14 0 1 chr15 6177803 6178799 -97316175 + RLTR10-int LTR ERVK 990 1984 -3 2 632 3192 31 2 51 chr15 6178801 6179211 -97315763 + RLTR10 LTR ERVK 1 390 0 2 632 1337 256 63 3 chr15 6180681 6181030 -97313944 - ORR1D2 LTR MaLR 0 370 1 2 632 256 93 17 69 chr15 6181720 6181778 -97313196 + C-rich Low_complexity Low_complexity 2 56 0 2 632 239 250 0 15 chr15 6181852 6181917 -97313057 + LTR33 LTR ERVL 444 507 -8 2 632 26 30 0 0 chr15 6182214 6182247 -97312727 + AT_rich Low_complexity Low_complexity 1 33 0 2 632 1913 143 15 50 chr15 6184620 6184959 -97310015 + ORR1A2 LTR MaLR 1 327 0 2 632 714 265 6 6 chr15 6185154 6185317 -97309657 + B3A SINE B2 1 163 -35 2 632 2219 102 3 61 chr15 6185321 6185667 -97309307 - ORR1A3 LTR MaLR 0 326 1 2 632 25 0 0 0 chr15 6185714 6185739 -97309235 + AT_rich Low_complexity Low_complexity 1 25 0 2 632 258 262 34 19 chr15 6186690 6186803 -97308171 - MLT1I LTR MaLR -282 207 92 2 632 351 236 22 22 chr15 6187079 6187170 -97307804 - ERVL-E-int LTR ERVL -1340 4327 4237 2 632 209 111 0 27 chr15 6187535 6187572 -97307402 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 2 632 209 278 14 14 chr15 6189299 6189372 -97305602 + CT-rich Low_complexity Low_complexity 2 74 0 2 632 2680 67 9 0 chr15 6190708 6191054 -97303920 - L1_Mus1 LINE L1 -1 6566 6218 2 632 300 27 0 0 chr15 6192361 6192398 -97302576 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 632 212 359 0 0 chr15 6192757 6192821 -97302153 - PB1 SINE Alu -63 64 1 2 632 608 248 8 0 chr15 6193081 6193214 -97301760 + ID_B1 SINE B4 91 224 0 2 632 3482 20 8 0 chr15 6193255 6193648 -97301326 - MTA_Mm LTR MaLR 0 396 1 2 632 216 0 0 0 chr15 6195195 6195219 -97299755 + (A)n Simple_repeat Simple_repeat 1 24 0 2 632 317 294 52 77 chr15 6195322 6195477 -97299497 + L2 LINE L2 2673 2823 -596 2 632 241 341 137 5 chr15 6196136 6196348 -97298626 + L2 LINE L2 2318 2557 -862 2 632 402 312 104 17 chr15 6196492 6196665 -97298309 + MIRb SINE MIR 14 201 -67 2 632 469 161 0 11 chr15 6197763 6197851 -97297123 - ID_B1 SINE B4 -3 221 135 2 632 403 301 26 0 chr15 6198347 6198460 -97296514 - PB1D10 SINE Alu -1 116 1 2 632 1102 102 11 0 chr15 6198987 6199163 -97295811 + B2_Mm1t SINE B2 15 192 -1 2 632 417 261 11 0 chr15 6199197 6199289 -97295685 + ID_B1 SINE B4 99 191 -33 2 632 2112 101 40 8 chr15 6200737 6201088 -97293886 - Lx3_Mus LINE L1 -865 6144 5783 2 632 2087 54 0 0 chr15 6201090 6201348 -97293626 - L1Md_A LINE L1 0 6582 6325 2 632 6690 37 0 0 chr15 6201348 6202155 -97292819 + L1_Mm LINE L1 1986 2792 -3091 2 632 1282 67 49 0 chr15 6202148 6202312 -97292662 - Lx3_Mus LINE L1 -1215 5794 5623 2 632 6474 73 57 8 chr15 6202312 6203201 -97291773 + Lx3_Mus LINE L1 6077 7009 0 2 632 834 221 56 31 chr15 6203233 6203429 -97291545 + B3 SINE B2 2 202 -14 2 632 377 305 47 32 chr15 6205204 6205408 -97289566 + B4A SINE B4 2 227 -65 2 632 1041 125 0 8 chr15 6205445 6205679 -97289295 + (CA)n Simple_repeat Simple_repeat 1 232 0 2 632 450 250 0 0 chr15 6207003 6207095 -97287879 + PB1D10 SINE Alu 14 105 -12 2 632 317 271 149 19 chr15 6207207 6207361 -97287613 - LTR82B Low_complexity ERVL -143 687 514 2 632 207 114 29 0 chr15 6207622 6207657 -97287317 + (TTA)n Simple_repeat Simple_repeat 3 38 0 2 632 21 0 0 0 chr15 6207665 6207686 -97287288 + AT_rich Low_complexity Low_complexity 1 21 0 2 632 481 240 147 103 chr15 6207689 6207777 -97287197 + B3 SINE B2 1 88 -128 2 632 843 150 7 13 chr15 6207777 6207926 -97287048 + B1_Mus1 SINE Alu 1 148 0 2 632 481 240 147 103 chr15 6207926 6208041 -97286933 + B3 SINE B2 89 213 -3 2 632 637 281 101 10 chr15 6208062 6208260 -97286714 + B3 SINE B2 1 216 0 2 632 27 29 0 0 chr15 6208358 6208392 -97286582 + AT_rich Low_complexity Low_complexity 1 34 0 2 632 396 0 0 0 chr15 6208472 6208516 -97286458 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 2 632 766 271 10 10 chr15 6208689 6208898 -97286076 + B3 SINE B2 1 209 -7 2 632 588 276 127 69 chr15 6209059 6209087 -97285887 - B4A SINE B4 0 292 266 2 632 471 18 0 0 chr15 6209087 6209143 -97285831 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 632 588 276 127 69 chr15 6209143 6209187 -97285787 - B4A SINE B4 -27 265 224 2 632 1211 104 38 6 chr15 6209187 6209370 -97285604 - B2_Mm2 SINE B2 -6 189 1 2 632 588 276 127 69 chr15 6209370 6209572 -97285402 - B4A SINE B4 -69 223 1 2 632 271 321 0 13 chr15 6209572 6209651 -97285323 - PB1D10 SINE Alu -36 81 4 2 632 444 165 0 0 chr15 6211517 6211608 -97283366 + (CA)n Simple_repeat Simple_repeat 2 92 0 2 632 21 57 0 0 chr15 6211685 6211720 -97283254 + AT_rich Low_complexity Low_complexity 1 35 0 2 632 546 29 0 0 chr15 6211784 6211852 -97283122 + (GA)n Simple_repeat Simple_repeat 2 69 0 2 632 4439 109 1 0 chr15 6212363 6213022 -97281952 + MusHAL1 LINE L1 1510 2169 -543 3 632 10298 99 36 1 chr15 6213020 6215180 -97279794 + L1_Mus3 LINE L1 4403 6638 0 3 632 966 84 0 123 chr15 6215183 6215345 -97279629 + B1_Mus1 SINE Alu 3 144 -4 3 632 387 0 0 0 chr15 6215346 6215389 -97279585 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 3 632 1656 100 139 0 chr15 6215574 6215854 -97279120 - ORR1A2 LTR MaLR -8 319 1 3 632 304 326 39 22 chr15 6215900 6216082 -97278892 + L1M1 LINE L1 5270 5454 -846 3 632 4333 160 6 40 chr15 6216098 6216892 -97278082 - Lx2B LINE L1 -152 6906 6045 3 632 1279 175 38 67 chr15 6216906 6217219 -97277755 + MTD LTR MaLR 102 405 -14 3 632 857 245 40 5 chr15 6217643 6217844 -97277130 + B3 SINE B2 1 208 -8 3 632 386 253 25 0 chr15 6218484 6218563 -97276411 + ID4_ SINE ID 3 83 0 3 632 864 170 13 20 chr15 6218622 6218772 -97276202 + B1_Mur3 SINE Alu 1 149 0 3 632 397 122 13 13 chr15 6218777 6218852 -97276122 + (GGA)n Simple_repeat Simple_repeat 2 76 0 3 632 22 0 0 0 chr15 6218967 6218989 -97275985 + AT_rich Low_complexity Low_complexity 1 22 0 3 632 377 341 16 31 chr15 6219282 6219409 -97275565 + ID_B1 SINE B4 92 216 -8 3 632 201 74 0 0 chr15 6219413 6219440 -97275534 + (CCAA)n Simple_repeat Simple_repeat 4 30 0 3 632 31 0 0 0 chr15 6219896 6219927 -97275047 + AT_rich Low_complexity Low_complexity 1 31 0 3 632 30905 39 21 0 chr15 6219927 6226263 -97268711 - L1Md_T LINE L1 -2 6580 110 3 632 298 372 58 0 chr15 6226280 6226401 -97268573 - ID_B1 SINE B4 -17 207 80 3 632 969 212 38 10 chr15 6226436 6226645 -97268329 - B3 SINE B2 -1 215 1 3 632 647 186 132 0 chr15 6226651 6226780 -97268194 - B1_Mur2 SINE Alu -1 148 3 3 632 431 315 131 99 chr15 6228174 6228456 -97266518 - B4 SINE B4 -1 291 1 3 632 345 164 0 0 chr15 6230617 6230690 -97264284 + (TG)n Simple_repeat Simple_repeat 1 73 0 3 632 231 36 0 0 chr15 6230849 6230877 -97264097 + (CTG)n Simple_repeat Simple_repeat 2 29 0 3 632 268 270 5 0 chr15 6230895 6230958 -97264016 - PB1D10 SINE Alu -37 83 18 3 632 384 22 0 0 chr15 6231720 6231765 -97263209 + (TTA)n Simple_repeat Simple_repeat 3 47 0 3 632 1352 90 5 11 chr15 6231869 6232059 -97262915 + B2_Mm2 SINE B2 1 189 -6 3 632 1571 263 12 12 chr15 6232643 6233062 -97261912 + MTD LTR MaLR 1 419 0 3 632 360 0 0 0 chr15 6234070 6234110 -97260864 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 632 819 119 0 0 chr15 6234135 6234261 -97260713 + (GGGA)n Simple_repeat Simple_repeat 4 129 0 3 632 343 307 8 95 chr15 6234294 6234420 -97260554 - RSINE1 SINE B4 -47 118 4 3 632 396 0 0 0 chr15 6235095 6235139 -97259835 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 632 607 241 0 21 chr15 6235139 6235279 -97259695 - B1_Mm SINE Alu -9 138 2 3 632 488 295 103 4 chr15 6236117 6236359 -97258615 - L1M2 LINE L1 -1172 4971 4706 3 632 930 158 6 0 chr15 6236614 6236772 -97258202 + URR1A DNA MER1_type 67 225 -1 3 632 848 222 32 88 chr15 6237379 6237720 -97257254 + RLTRETN_Mm LTR ERVK 1 322 0 3 632 929 307 52 13 chr15 6237762 6237993 -97256981 - B4 SINE B4 -48 244 5 3 632 337 278 0 100 chr15 6237996 6238096 -97256878 + RMER30 DNA MER1_type 104 193 -9 3 632 184 306 211 56 chr15 6238100 6238242 -97256732 + MER5A DNA MER1_type 4 167 -22 3 632 1474 228 65 8 chr15 6238285 6238639 -97256335 + ORR1D1 LTR MaLR 1 374 0 3 632 262 327 56 9 chr15 6238640 6238748 -97256226 - MER81 DNA AcHobo -1 113 1 3 632 337 284 60 0 chr15 6239127 6239235 -97255739 - B1F1 SINE Alu -35 115 1 3 632 25 0 0 0 chr15 6239801 6239826 -97255148 + AT_rich Low_complexity Low_complexity 1 25 0 3 632 347 0 23 0 chr15 6240038 6240081 -97254893 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 3 632 323 307 23 0 chr15 6240667 6240755 -97254219 - MIRb SINE MIR -68 200 111 3 632 477 47 0 0 chr15 6241391 6241455 -97253519 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 632 200 35 35 0 chr15 6241463 6241492 -97253482 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 632 1410 56 0 0 chr15 6241997 6242177 -97252797 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 632 690 47 0 0 chr15 6242178 6242264 -97252710 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 3 632 2089 150 19 48 chr15 6242957 6243328 -97251646 + ORR1B2 LTR MaLR 1 360 -7 3 632 918 95 0 0 chr15 6243812 6243960 -97251014 + (TC)n Simple_repeat Simple_repeat 2 149 0 3 632 3656 153 225 56 chr15 6243974 6244831 -97250143 + RLTR25B LTR ERVK 1 1002 -26 3 632 2056 275 64 5 chr15 6244869 6245480 -97249494 - Lx8 LINE L1 -13 7460 6814 3 632 593 179 0 8 chr15 6246490 6246614 -97248360 + (CATA)n Simple_repeat Simple_repeat 2 124 0 3 632 372 22 0 0 chr15 6247011 6247056 -97247918 + (TC)n Simple_repeat Simple_repeat 1 45 0 3 632 252 0 0 0 chr15 6247056 6247083 -97247891 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 632 243 0 0 0 chr15 6247083 6247109 -97247865 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 632 311 304 26 129 chr15 6247155 6247310 -97247664 + ID_B1 SINE B4 4 142 -82 3 632 320 238 107 0 chr15 6247261 6247345 -97247629 + PB1D10 SINE Alu 10 102 -15 3 632 209 79 0 73 chr15 6248161 6248202 -97246772 + C-rich Low_complexity Low_complexity 1 38 0 3 632 288 137 0 0 chr15 6248237 6248288 -97246686 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 632 725 265 93 5 chr15 6248341 6248546 -97246428 - ID_B1 SINE B4 -1 223 1 3 632 537 385 120 28 chr15 6249851 6250209 -97244765 - LTR16B LTR ERVL -35 428 38 3 632 451 226 18 73 chr15 6250592 6250702 -97244272 - B1_Mus1 SINE Alu -10 138 35 3 632 267 200 20 0 chr15 6250854 6250904 -97244070 + B1_Mus1 SINE Alu 1 51 -97 3 632 341 295 80 0 chr15 6251216 6251328 -97243646 - MER5A DNA MER1_type -22 167 47 3 632 303 309 45 9 chr15 6251471 6251582 -97243392 - L2a LINE L2 0 3426 3312 3 632 183 162 0 0 chr15 6251872 6251909 -97243065 + CT-rich Low_complexity Low_complexity 1 37 0 3 632 463 316 57 0 chr15 6253073 6253231 -97241743 + MER5A DNA MER1_type 1 167 -22 3 632 552 316 80 17 chr15 6254791 6255251 -97239723 - L1M4b LINE L1 -1081 5925 5437 3 632 637 292 83 34 chr15 6255262 6255670 -97239304 - L1M4b LINE L1 -1734 5272 4845 3 632 329 360 29 53 chr15 6255670 6255697 -97239277 - ID_B1 SINE B4 -20 204 157 3 632 372 258 0 51 chr15 6255697 6255795 -97239179 - PB1D10 SINE Alu -17 100 8 3 632 329 360 29 53 chr15 6255795 6255878 -97239096 - ID_B1 SINE B4 -20 156 2 3 632 448 119 0 0 chr15 6256226 6256293 -97238681 + B1_Mur4 SINE Alu 79 145 -5 3 632 360 118 0 0 chr15 6256293 6256361 -97238613 + (GA)n Simple_repeat Simple_repeat 1 68 0 3 632 450 298 186 4 chr15 6256419 6256672 -97238302 - L1M4b LINE L1 -3172 3834 3536 3 632 185 0 40 0 chr15 6256692 6256717 -97238257 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 632 297 370 13 17 chr15 6256720 6256954 -97238020 - L1M4b LINE L1 -6299 1035 803 3 632 180 176 0 0 chr15 6257023 6257057 -97237917 + (CTCTG)n Simple_repeat Simple_repeat 2 35 0 3 632 711 65 0 0 chr15 6257068 6257161 -97237813 + (CTATG)n Simple_repeat Simple_repeat 3 95 0 3 632 897 173 150 10 chr15 6257234 6257427 -97237547 + URR1A DNA MER1_type 5 224 -2 3 632 412 381 66 14 chr15 6257433 6257795 -97237179 - L1M4b LINE L1 -6743 591 211 3 632 240 303 110 29 chr15 6258016 6258152 -97236822 + MIR SINE MIR 116 262 0 3 632 825 280 14 5 chr15 6258402 6258614 -97236360 - B3 SINE B2 0 216 3 3 632 23 54 0 0 chr15 6258624 6258661 -97236313 + AT_rich Low_complexity Low_complexity 1 37 0 3 632 1716 269 34 23 chr15 6258794 6259349 -97235625 - Lx7 LINE L1 -318 7378 6818 3 632 234 0 0 0 chr15 6259467 6259493 -97235481 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 3 632 204 67 0 0 chr15 6259633 6259663 -97235311 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 3 632 221 30 0 57 chr15 6260244 6260279 -97234695 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 3 632 676 224 34 6 chr15 6262396 6262571 -97232403 - B3A SINE B2 -18 180 1 3 632 290 132 0 19 chr15 6263332 6263386 -97231588 + CT-rich Low_complexity Low_complexity 3 55 0 3 632 462 209 99 0 chr15 6264103 6264194 -97230780 + B1_Mur4 SINE Alu 46 145 -5 3 632 237 128 0 0 chr15 6264419 6264466 -97230508 + (ATTG)n Simple_repeat Simple_repeat 1 47 0 3 632 600 101 0 0 chr15 6264467 6264556 -97230418 + (GTTTG)n Simple_repeat Simple_repeat 5 93 0 3 632 384 165 11 21 chr15 6265469 6265562 -97229412 + CT-rich Low_complexity Low_complexity 1 92 0 3 632 297 0 0 0 chr15 6265767 6265800 -97229174 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 3 632 28 71 0 0 chr15 6265868 6265924 -97229050 + AT_rich Low_complexity Low_complexity 1 56 0 3 632 648 38 0 0 chr15 6266886 6266965 -97228009 + (CCCTAA)n Simple_repeat Simple_repeat 1 79 0 3 632 582 315 83 24 chr15 6267226 6267431 -97227543 - ID_B1 SINE B4 -2 222 6 3 632 921 168 0 0 chr15 6267773 6267916 -97227058 + B1_Mur4 SINE Alu 1 143 -7 3 632 321 26 0 0 chr15 6267917 6267955 -97227019 + (GAAA)n Simple_repeat Simple_repeat 4 41 0 3 632 324 80 0 39 chr15 6267955 6268007 -97226967 + (GGGA)n Simple_repeat Simple_repeat 1 50 0 3 632 386 161 37 0 chr15 6268013 6268094 -97226880 + GA-rich Low_complexity Low_complexity 2 85 0 3 632 351 0 0 0 chr15 6268129 6268168 -97226806 + (TAAA)n Simple_repeat Simple_repeat 4 42 0 3 632 1377 51 79 0 chr15 6268856 6269015 -97225959 + B2_Mm1a SINE B2 2 160 -33 3 632 351 0 0 0 chr15 6269015 6269054 -97225920 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 4 632 1377 51 79 0 chr15 6269054 6269072 -97225902 + B2_Mm1a SINE B2 161 191 -2 3 632 1055 178 60 18 chr15 6269481 6269698 -97225276 - URR1A DNA MER1_type 0 226 1 4 632 858 188 0 27 chr15 6269749 6269897 -97225077 + B1_Mur3 SINE Alu 3 146 -3 4 632 1335 33 14 5 chr15 6269900 6270112 -97224862 + (TAGA)n Simple_repeat Simple_repeat 1 214 0 4 632 339 247 20 40 chr15 6271561 6271662 -97223312 - PB1D10 SINE Alu -40 109 11 4 632 244 327 54 36 chr15 6272176 6272287 -97222687 + B1F2 SINE Alu 1 113 -36 4 632 205 146 20 20 chr15 6272900 6272949 -97222025 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 4 632 352 308 47 47 chr15 6273123 6273314 -97221660 - RMER15 LTR ERVL -49 526 336 4 632 247 301 24 12 chr15 6273471 6273555 -97221419 - PB1D10 SINE Alu -32 85 1 4 632 304 294 0 0 chr15 6273780 6273872 -97221102 - MER117 DNA MER1_type -96 101 10 4 632 546 292 20 34 chr15 6273969 6274118 -97220856 + B1F SINE Alu 1 147 -2 4 632 416 296 7 29 chr15 6274123 6274262 -97220712 + GA-rich Low_complexity Low_complexity 5 140 0 4 632 518 287 22 0 chr15 6274270 6274406 -97220568 + B1F1 SINE Alu 9 147 -2 4 632 192 40 0 0 chr15 6274414 6274439 -97220535 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 632 354 152 0 0 chr15 6275260 6275271 -97219703 + A-rich Low_complexity Low_complexity 1 11 0 4 632 1195 41 7 0 chr15 6275271 6275417 -97219557 + B1_Mus2 SINE Alu 1 147 0 4 632 354 152 0 0 chr15 6275417 6275471 -97219503 + A-rich Low_complexity Low_complexity 12 65 0 4 632 229 314 111 16 chr15 6275554 6275680 -97219294 + L2 LINE L2 2532 2669 -750 4 632 544 123 38 19 chr15 6275754 6275912 -97219062 + (TCTCTG)n Simple_repeat Simple_repeat 2 162 0 4 632 276 130 0 0 chr15 6275908 6275954 -97219020 + (CCCCCT)n Simple_repeat Simple_repeat 5 50 0 4 632 326 235 0 14 chr15 6276045 6276114 -97218860 + L2b LINE L2 3308 3375 0 4 632 259 271 0 0 chr15 6276861 6276931 -97218043 + GA-rich Low_complexity Low_complexity 2 71 0 4 632 324 331 59 15 chr15 6276932 6277067 -97217907 + ID_B1 SINE B4 84 224 0 4 632 205 167 0 0 chr15 6277119 6277155 -97217819 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 632 5499 114 77 24 chr15 6277686 6278567 -97216407 - Lx LINE L1 -5 6649 5722 4 632 194 156 22 0 chr15 6280868 6280913 -97214061 + (CTTG)n Simple_repeat Simple_repeat 2 47 0 4 632 323 337 104 22 chr15 6281683 6281865 -97213109 + MIR SINE MIR 31 227 -35 4 632 369 0 0 0 chr15 6283360 6283401 -97211573 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 632 796 212 0 7 chr15 6283401 6283539 -97211435 + B1_Mus2 SINE Alu 3 139 -8 4 632 1559 60 0 5 chr15 6284094 6284279 -97210695 - B2_Mm2 SINE B2 -10 185 2 4 632 392 276 23 0 chr15 6284625 6284712 -97210262 - PB1D10 SINE Alu 0 117 29 4 632 292 355 28 0 chr15 6285353 6285445 -97209529 + PB1D10 SINE Alu 3 99 -21 4 632 287 292 0 0 chr15 6285991 6286056 -97208918 + ID4 SINE ID 18 82 -1 4 632 181 311 66 28 chr15 6287510 6287616 -97207358 + MIR3 SINE MIR 9 118 -90 4 632 328 348 0 0 chr15 6288871 6288960 -97206014 + PB1 SINE Alu 1 89 -38 4 632 234 0 0 0 chr15 6289013 6289039 -97205935 + (CCA)n Simple_repeat Simple_repeat 3 28 0 4 632 22 0 0 0 chr15 6289051 6289073 -97205901 + AT_rich Low_complexity Low_complexity 1 22 0 4 632 267 339 56 8 chr15 6289221 6289346 -97205628 - MER5A1 DNA MER1_type -3 163 33 4 632 21 36 0 0 chr15 6289613 6289641 -97205333 + AT_rich Low_complexity Low_complexity 1 28 0 4 632 506 112 0 59 chr15 6289653 6289738 -97205236 - B1_Mus2 SINE Alu 0 147 68 4 632 586 113 148 0 chr15 6290061 6290176 -97204798 + Lx2 LINE L1 6864 6995 -2 4 632 368 216 19 93 chr15 6290176 6290187 -97204787 + MT2B LTR ERVL 152 154 -447 4 632 656 130 3 4 chr15 6290187 6290291 -97204683 + B1_Mus1 SINE Alu 1 107 -13 4 632 321 26 0 0 chr15 6290291 6290329 -97204645 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 4 632 642 138 33 41 chr15 6290329 6290345 -97204629 + PB1D9 SINE Alu 108 120 0 4 632 21 0 0 0 chr15 6291074 6291095 -97203879 + AT_rich Low_complexity Low_complexity 1 21 0 4 633 210 372 25 37 chr15 6291785 6291947 -97203027 + MIR SINE MIR 73 232 -30 4 633 306 237 158 0 chr15 6292468 6292544 -97202430 + PB1D10 SINE Alu 14 101 -16 4 633 184 343 39 10 chr15 6292740 6292843 -97202131 + L3b LINE CR1 211 316 -166 4 633 248 323 0 70 chr15 6292880 6292980 -97201994 + B1F1 SINE Alu 30 122 -27 4 633 267 104 0 0 chr15 6293079 6293127 -97201847 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 633 241 182 0 64 chr15 6293502 6293549 -97201425 + ID4_ SINE ID 39 82 -1 4 633 385 253 116 0 chr15 6293662 6293757 -97201217 - PB1D10 SINE Alu -8 109 4 4 633 342 0 0 0 chr15 6293932 6293970 -97201004 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 633 6705 73 32 12 chr15 6294136 6295051 -97199923 - Lx3A LINE L1 -389 6592 5660 4 633 3018 99 15 0 chr15 6295073 6295478 -97199496 + Lx3A LINE L1 6565 6975 -6 4 633 384 55 0 18 chr15 6295503 6295559 -97199415 - B1_Mus2 SINE Alu 0 147 93 4 633 225 0 0 0 chr15 6295695 6295720 -97199254 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 633 428 233 11 0 chr15 6295723 6295813 -97199161 + PB1D10 SINE Alu 17 107 -10 4 633 242 329 0 12 chr15 6295996 6296076 -97198898 - L2 LINE L2 -1031 2388 2310 4 633 269 0 56 0 chr15 6296815 6296851 -97198123 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 4 633 219 36 0 0 chr15 6296854 6296882 -97198092 + (TTTTG)n Simple_repeat Simple_repeat 5 32 0 4 633 355 300 9 18 chr15 6298453 6298565 -97196409 + PB1D10 SINE Alu 5 115 -2 4 633 3657 224 106 25 chr15 6299991 6300453 -97194521 - Lx7 LINE L1 -11 7685 7151 4 633 2663 86 3 0 chr15 6300453 6300779 -97194195 - ORR1A2 LTR MaLR 0 327 1 4 633 3657 224 106 25 chr15 6300779 6301264 -97193710 - Lx7 LINE L1 -546 7150 6662 4 633 319 206 32 0 chr15 6301588 6301651 -97193323 - Lx9 LINE L1 -429 7215 7151 4 633 383 212 49 29 chr15 6302387 6302489 -97192485 - Lx8 LINE L1 -432 7041 6938 4 633 25 31 0 0 chr15 6302517 6302549 -97192425 + AT_rich Low_complexity Low_complexity 1 32 0 4 633 724 65 19 0 chr15 6302561 6302668 -97192306 + (GA)n Simple_repeat Simple_repeat 2 110 0 4 633 432 266 92 0 chr15 6303500 6303609 -97191365 - PB1D9 SINE Alu -1 119 1 4 633 543 293 46 30 chr15 6303655 6303852 -97191122 + B3A SINE B2 2 201 -15 4 633 566 278 0 0 chr15 6304028 6304154 -97190820 + RSINE1 SINE B4 2 127 -38 4 633 453 36 0 0 chr15 6304193 6304248 -97190726 + (GA)n Simple_repeat Simple_repeat 1 55 0 4 633 632 67 11 0 chr15 6304248 6304338 -97190636 + (GAA)n Simple_repeat Simple_repeat 3 93 0 4 633 25 31 0 0 chr15 6304338 6304370 -97190604 + AT_rich Low_complexity Low_complexity 1 32 0 4 633 364 241 81 27 chr15 6304649 6304760 -97190214 + PB1D10 SINE Alu 1 117 0 4 633 576 227 94 0 chr15 6305285 6305413 -97189561 - B1_Mur1 SINE Alu 0 149 10 4 633 4631 145 110 50 chr15 6305433 6306348 -97188626 - Lx4B LINE L1 -2 7056 6087 4 633 4690 142 5 7 chr15 6306347 6307085 -97187889 + Lx4A LINE L1 5140 5876 -1 4 633 1271 126 0 25 chr15 6307261 6307465 -97187509 + Lx4A LINE L1 5893 6091 -967 4 633 372 249 224 38 chr15 6307496 6307706 -97187268 + B4A SINE B4 6 254 -38 4 633 303 28 0 0 chr15 6307712 6307748 -97187226 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 633 4288 28 0 6 chr15 6307787 6308263 -97186711 + L1Md_F2 LINE L1 6100 6572 -10 4 633 228 309 14 14 chr15 6308379 6308448 -97186526 + ID4 SINE ID 5 73 -10 4 633 771 288 27 89 chr15 6308522 6308815 -97186159 + B4 SINE B4 2 276 -16 4 633 468 51 0 0 chr15 6308820 6308879 -97186095 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 633 590 281 77 109 chr15 6309253 6309501 -97185473 + B4 SINE B4 49 288 -4 4 633 1202 69 14 0 chr15 6310443 6310588 -97184386 + B1_Mus2 SINE Alu 1 147 0 4 633 189 0 0 0 chr15 6310591 6310612 -97184362 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 4 633 356 258 0 0 chr15 6310746 6310812 -97184162 + ID4_ SINE ID 15 80 -3 4 633 263 283 31 42 chr15 6312086 6312182 -97182792 - Kanga1d DNA Tc2 0 609 515 4 633 342 318 9 36 chr15 6312186 6312297 -97182677 + PB1D10 SINE Alu 5 112 -5 4 633 438 20 0 0 chr15 6313231 6313282 -97181692 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 4 633 2383 113 30 20 chr15 6313282 6313827 -97181147 - Lx3_Mus LINE L1 -21 6988 6264 4 633 14032 81 21 26 chr15 6313913 6315608 -97179366 - L1VL2 LINE L1 -636 2979 1274 4 633 5302 43 16 7 chr15 6315608 6316223 -97178751 + L1_Mus1 LINE L1 5945 6565 -2 4 633 14032 81 22 7 chr15 6316223 6317217 -97177757 - L1VL2 LINE L1 -2342 1273 284 4 633 363 317 84 42 chr15 6317763 6317778 -97177196 + B4A SINE B4 81 221 -69 4 633 536 202 184 0 chr15 6317778 6317892 -97177082 + B1_Mur3 SINE Alu 9 143 -6 4 633 977 47 8 0 chr15 6317894 6318021 -97176953 + (TAGA)n Simple_repeat Simple_repeat 2 129 0 4 633 363 317 84 42 chr15 6318021 6318080 -97176894 + B4A SINE B4 224 279 -13 4 633 231 36 0 0 chr15 6318080 6318108 -97176866 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 633 305 235 14 29 chr15 6318118 6318188 -97176786 + ID4_ SINE ID 4 72 -11 4 633 225 94 0 0 chr15 6318507 6318539 -97176435 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 633 261 0 0 0 chr15 6318711 6318740 -97176234 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 5 633 297 307 0 0 chr15 6319210 6319285 -97175689 - ID4_ SINE ID -6 77 3 5 633 771 170 11 11 chr15 6320273 6320451 -97174523 + CT-rich Low_complexity Low_complexity 3 180 0 5 633 599 110 0 0 chr15 6321122 6321204 -97173770 + B2_Mm2 SINE B2 21 102 -93 5 633 731 244 0 0 chr15 6321443 6321578 -97173396 + B1_Mur2 SINE Alu 2 136 -13 5 633 293 324 0 0 chr15 6321657 6321731 -97173243 + ID4_ SINE ID 1 74 -9 5 633 233 329 0 28 chr15 6321894 6321966 -97173008 - B3A SINE B2 -14 184 115 5 633 847 343 21 11 chr15 6321914 6322197 -97172777 - B4A SINE B4 0 292 7 5 633 1255 87 128 0 chr15 6323080 6323252 -97171722 + B2_Mm2 SINE B2 2 195 0 5 633 264 100 0 0 chr15 6323346 6323386 -97171588 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 633 629 264 0 0 chr15 6323530 6323674 -97171300 - Lx9 LINE L1 -486 7158 7015 5 633 1240 205 15 26 chr15 6323670 6323935 -97171039 + Lx9 LINE L1 7130 7391 -253 5 633 693 36 0 0 chr15 6323935 6324019 -97170955 + (TA)n Simple_repeat Simple_repeat 2 85 0 5 633 40 0 0 0 chr15 6324064 6324104 -97170870 + AT_rich Low_complexity Low_complexity 1 40 0 5 633 237 83 0 0 chr15 6324123 6324159 -97170815 + (TTG)n Simple_repeat Simple_repeat 2 37 0 5 633 432 272 66 7 chr15 6324171 6324308 -97170666 - B1F1 SINE Alu -3 146 2 5 633 1094 144 0 0 chr15 6324616 6324762 -97170212 + B1_Mur4 SINE Alu 2 147 -3 5 633 849 189 0 0 chr15 6324774 6324943 -97170031 + GA-rich Low_complexity Low_complexity 6 174 0 5 633 231 133 0 0 chr15 6325600 6325645 -97169329 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 633 291 258 45 0 chr15 6325872 6325938 -97169036 + BC1_Mm scRNA scRNA 2 70 -82 5 633 360 276 82 77 chr15 6326604 6326812 -97168162 - L1ME3B LINE L1 -146 6094 5886 5 633 593 243 14 35 chr15 6326972 6327117 -97167857 - ID_B1 SINE B4 0 224 83 5 633 190 327 59 10 chr15 6327276 6327378 -97167596 - MIR SINE MIR -28 234 128 5 633 378 0 0 0 chr15 6328307 6328349 -97166625 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 633 377 326 15 44 chr15 6328431 6328566 -97166408 + B1F2 SINE Alu 1 131 -18 5 633 346 295 53 18 chr15 6328593 6328707 -97166267 + PB1 SINE Alu 2 119 -8 5 633 724 232 22 0 chr15 6329139 6329277 -97165697 - B1_Mur4 SINE Alu -6 144 4 5 633 194 91 30 0 chr15 6330273 6330306 -97164668 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 633 296 315 0 80 chr15 6330361 6330461 -97164513 - B4A SINE B4 -109 183 92 5 633 333 291 0 23 chr15 6330483 6330571 -97164403 - B4 SINE B4 -206 86 1 5 633 7374 75 15 5 chr15 6331156 6332736 -97162238 - L1_Mus1 LINE L1 0 6638 5054 5 633 25 65 0 0 chr15 6332970 6333016 -97161958 + AT_rich Low_complexity Low_complexity 1 46 0 5 633 325 287 44 62 chr15 6333021 6333181 -97161793 - RSINE1 SINE B4 -6 159 3 5 633 638 96 10 0 chr15 6333384 6333488 -97161486 + (GA)n Simple_repeat Simple_repeat 2 106 0 5 633 192 77 0 0 chr15 6333697 6333723 -97161251 + (TTTTC)n Simple_repeat Simple_repeat 5 30 0 5 633 234 0 0 0 chr15 6333735 6333761 -97161213 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 5 633 290 289 13 0 chr15 6333835 6333911 -97161063 - PB1 SINE Alu -50 77 1 5 633 297 0 0 0 chr15 6335202 6335235 -97159739 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 633 184 212 0 29 chr15 6335597 6335665 -97159309 + GA-rich Low_complexity Low_complexity 1 66 0 5 633 420 206 0 41 chr15 6335694 6335841 -97159133 + GA-rich Low_complexity Low_complexity 1 141 0 5 633 617 119 10 0 chr15 6336968 6337069 -97157905 + (TTTC)n Simple_repeat Simple_repeat 2 103 0 5 633 459 0 0 0 chr15 6337281 6337332 -97157642 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 633 227 290 14 55 chr15 6338748 6338821 -97156153 - ID_B1 SINE B4 -123 101 32 5 633 233 270 89 63 chr15 6338766 6338845 -97156129 - ID4 SINE ID -2 81 1 5 633 371 235 0 58 chr15 6338854 6338958 -97156016 - PB1D10 SINE Alu -19 98 1 5 633 242 191 75 19 chr15 6339170 6339277 -97155697 + RMER17A LTR ERVK 354 466 -285 5 633 244 308 176 8 chr15 6340323 6340454 -97154520 + MIR SINE MIR 66 218 -44 5 633 762 147 0 0 chr15 6341729 6341858 -97153116 + (TTC)n Simple_repeat Simple_repeat 3 131 0 5 633 1368 97 11 11 chr15 6341860 6342048 -97152926 - B2_Mm1a SINE B2 -4 189 2 5 633 23 0 0 0 chr15 6342708 6342731 -97152243 + AT_rich Low_complexity Low_complexity 1 23 0 5 633 827 234 83 19 chr15 6342734 6342939 -97152035 + ID_B1 SINE B4 2 219 -5 5 633 1335 81 52 0 chr15 6343337 6343509 -97151465 + B2_Mm2 SINE B2 1 181 -14 5 633 186 43 0 0 chr15 6343513 6343536 -97151438 + (GAA)n Simple_repeat Simple_repeat 2 24 0 5 633 308 203 40 68 chr15 6344169 6344243 -97150731 - HAL1-3A_ME LINE L1 -503 2355 2284 5 633 352 228 75 56 chr15 6344244 6344351 -97150623 - PB1D7 SINE Alu -11 109 1 5 633 293 0 27 0 chr15 6344897 6344934 -97150040 + (TAGA)n Simple_repeat Simple_repeat 4 41 0 5 633 387 0 0 0 chr15 6345175 6345218 -97149756 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 633 347 262 104 28 chr15 6345231 6345337 -97149637 + PB1 SINE Alu 12 125 -2 5 633 431 232 18 129 chr15 6345837 6346000 -97148974 - B1F SINE Alu 0 149 5 5 633 268 118 29 0 chr15 6346487 6346555 -97148419 + (TTTTTG)n Simple_repeat Simple_repeat 4 73 0 5 633 937 78 115 8 chr15 6346560 6346690 -97148284 - B1_Mus1 SINE Alu -1 147 4 5 633 313 299 78 0 chr15 6348138 6348215 -97146759 + L2b LINE L2 3273 3355 -20 5 633 468 179 132 96 chr15 6348693 6348829 -97146145 - B1F SINE Alu -6 143 3 5 633 462 294 75 37 chr15 6349066 6349253 -97145721 + B3 SINE B2 16 209 -7 5 633 271 225 77 35 chr15 6349284 6349392 -97145582 - B1_Mur4 SINE Alu -5 115 1 5 633 23 33 0 0 chr15 6350528 6350558 -97144416 + AT_rich Low_complexity Low_complexity 1 30 0 5 633 232 27 26 26 chr15 6351318 6351356 -97143618 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 5 633 417 54 0 0 chr15 6351599 6351655 -97143319 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 633 413 184 102 0 chr15 6351655 6351753 -97143221 - B1F1 SINE Alu -11 138 31 5 633 458 222 30 20 chr15 6352211 6352312 -97142662 + B1_Mur2 SINE Alu 2 103 -46 5 633 396 0 0 0 chr15 6352500 6352544 -97142430 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 633 487 239 53 0 chr15 6352575 6352688 -97142286 - PB1D9 SINE Alu 0 120 2 5 633 450 0 0 0 chr15 6353144 6353194 -97141780 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 633 243 0 0 0 chr15 6353607 6353634 -97141340 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 5 633 31 58 0 0 chr15 6353840 6353892 -97141082 + AT_rich Low_complexity Low_complexity 1 52 0 5 633 1930 226 100 15 chr15 6355148 6355678 -97139296 - Lx9 LINE L1 -48 7596 7022 5 633 1287 21 0 14 chr15 6355697 6355842 -97139132 - B1_Mus2 SINE Alu 0 147 5 5 633 231 100 100 0 chr15 6355843 6355883 -97139091 - Lx9 LINE L1 -606 7038 6995 5 633 306 250 32 32 chr15 6356174 6356197 -97138777 - B1_Mm SINE Alu -13 134 113 5 633 234 0 0 0 chr15 6356197 6356223 -97138751 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 633 306 250 32 32 chr15 6356223 6356294 -97138680 - B1_Mm SINE Alu -35 112 41 5 633 249 250 79 56 chr15 6356227 6356316 -97138658 - MT2B2 LTR ERVL -320 264 174 5 633 206 81 27 0 chr15 6356373 6356410 -97138564 + (TTTG)n Simple_repeat Simple_repeat 4 41 0 5 633 275 159 180 5 chr15 6356410 6356501 -97138473 - B1_Mm SINE Alu 0 147 2 5 633 410 36 18 0 chr15 6357687 6357743 -97137231 + (TTTTG)n Simple_repeat Simple_repeat 4 60 0 5 633 326 262 143 0 chr15 6357743 6357827 -97137147 - PB1 SINE Alu -11 116 21 5 633 180 111 0 0 chr15 6358699 6358726 -97136248 + (T)n Simple_repeat Simple_repeat 1 27 0 5 633 744 126 0 0 chr15 6358746 6358865 -97136109 + (GTCTG)n Simple_repeat Simple_repeat 4 122 0 5 633 182 304 52 42 chr15 6359069 6359165 -97135809 - L3 LINE CR1 -3443 1046 950 5 633 209 213 0 0 chr15 6359415 6359462 -97135512 + T-rich Low_complexity Low_complexity 1 47 0 5 633 428 245 64 0 chr15 6359467 6359561 -97135413 - B1F1 SINE Alu -7 142 43 5 633 626 65 11 0 chr15 6359904 6359996 -97134978 + (TG)n Simple_repeat Simple_repeat 2 94 0 5 633 370 338 29 29 chr15 6359999 6360136 -97134838 - RSINE1 SINE B4 -26 139 3 5 633 660 298 81 60 chr15 6360730 6361065 -97133909 - MER2 DNA MER2_type -2 343 2 5 633 319 298 153 0 chr15 6362179 6362303 -97132671 + B1F SINE Alu 3 145 -4 5 633 1371 114 11 0 chr15 6363497 6363681 -97131293 - B2_Mm1t SINE B2 -7 186 1 5 633 207 0 0 0 chr15 6363739 6363762 -97131212 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 633 569 279 76 69 chr15 6364305 6364609 -97130365 - MLT1C LTR MaLR -16 451 146 5 633 3726 18 2 0 chr15 6365597 6365992 -97128982 - MTA_Mm LTR MaLR 0 396 1 5 633 270 209 0 44 chr15 6366090 6366173 -97128801 - L1MA4 LINE L1 -370 5930 5830 5 633 1113 68 0 0 chr15 6367163 6367310 -97127664 + (TTTC)n Simple_repeat Simple_repeat 1 147 0 5 633 1081 83 0 0 chr15 6367311 6367443 -97127531 - B1_Mus2 SINE Alu -13 134 3 5 633 252 86 0 0 chr15 6367444 6367479 -97127495 + (T)n Simple_repeat Simple_repeat 1 35 0 5 633 436 338 121 15 chr15 6368730 6368994 -97125980 + B4A SINE B4 1 292 0 5 633 22 0 0 0 chr15 6369010 6369032 -97125942 + AT_rich Low_complexity Low_complexity 1 22 0 5 633 1034 286 42 28 chr15 6369106 6369394 -97125580 - B4A SINE B4 0 292 1 6 633 250 330 36 80 chr15 6369450 6369488 -97125486 - ID_B1 SINE B4 -116 108 2 6 633 270 347 0 27 chr15 6369488 6369562 -97125412 - ID4_ SINE ID -10 73 2 6 633 354 286 61 18 chr15 6370181 6370295 -97124679 - HAL1-3A_ME LINE L1 -456 2402 2284 6 633 249 83 0 0 chr15 6370295 6370331 -97124643 + (TTTC)n Simple_repeat Simple_repeat 3 38 0 6 633 245 29 0 29 chr15 6370797 6370832 -97124142 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 633 1228 82 0 0 chr15 6370838 6370985 -97123989 - B1_Mus2 SINE Alu 0 147 1 6 633 313 327 79 0 chr15 6371604 6371705 -97123269 - PB1D10 SINE Alu -8 109 1 6 633 1205 69 0 0 chr15 6371966 6372110 -97122864 + B1_Mus1 SINE Alu 3 146 -2 6 633 1114 103 7 0 chr15 6372455 6372600 -97122374 - B1_Mus1 SINE Alu -1 147 2 6 633 22 0 0 0 chr15 6372996 6373018 -97121956 + AT_rich Low_complexity Low_complexity 1 22 0 6 633 1875 155 111 22 chr15 6373390 6373752 -97121222 - ORR1B1 LTR MaLR 0 394 1 6 633 324 48 0 0 chr15 6375679 6375721 -97119253 + (GA)n Simple_repeat Simple_repeat 1 42 0 6 633 309 51 0 0 chr15 6376405 6376444 -97118530 + (TTG)n Simple_repeat Simple_repeat 2 40 0 6 633 314 138 17 0 chr15 6377819 6377877 -97117097 + GA-rich Low_complexity Low_complexity 2 60 0 6 633 350 303 0 0 chr15 6378745 6378822 -97116152 + ID4_ SINE ID 1 77 -6 6 633 495 48 0 0 chr15 6383141 6383203 -97111771 + (TTTA)n Simple_repeat Simple_repeat 4 65 0 6 633 600 75 21 11 chr15 6383203 6383298 -97111676 - B1_Mur4 SINE Alu -12 138 43 6 633 364 0 0 161 chr15 6383301 6383493 -97111481 + (CTCTG)n Simple_repeat Simple_repeat 5 165 0 6 633 377 167 0 0 chr15 6383416 6383494 -97111480 + CT-rich Low_complexity Low_complexity 103 180 0 6 633 360 133 0 32 chr15 6383494 6383556 -97111418 - B1_Mus1 SINE Alu -88 60 1 6 633 288 70 0 0 chr15 6383556 6383599 -97111375 + (TATG)n Simple_repeat Simple_repeat 2 44 0 6 633 249 228 0 0 chr15 6384123 6384180 -97110794 + L1VL2 LINE L1 87 143 -6192 6 633 21 0 0 0 chr15 6385091 6385112 -97109862 + AT_rich Low_complexity Low_complexity 1 21 0 6 633 34 24 0 0 chr15 6387203 6387244 -97107730 + AT_rich Low_complexity Low_complexity 1 41 0 6 633 900 251 49 10 chr15 6387352 6387557 -97107417 - ID_B1 SINE B4 0 224 12 6 633 352 243 147 57 chr15 6388060 6388217 -97106757 - Tigger7 DNA MER2_type -6 2485 2315 6 633 686 276 207 12 chr15 6388259 6388501 -97106473 - MTE2b LTR MaLR -8 371 83 6 633 202 194 0 0 chr15 6389708 6389744 -97105230 + CT-rich Low_complexity Low_complexity 1 36 0 6 633 2989 80 5 0 chr15 6391781 6392179 -97102795 + MTB LTR MaLR 1 400 0 6 633 383 306 0 39 chr15 6394176 6394278 -97100696 + ID_B1 SINE B4 94 191 -33 6 633 294 313 43 0 chr15 6394305 6394420 -97100554 + PB1D7 SINE Alu 1 120 0 6 633 364 322 60 76 chr15 6396072 6396455 -97098519 + MLT1A1 LTR MaLR 20 396 -12 6 633 735 301 51 82 chr15 6397576 6397967 -97097007 - MLT1B LTR MaLR -8 382 4 6 633 186 103 0 0 chr15 6398089 6398118 -97096856 + (TA)n Simple_repeat Simple_repeat 1 29 0 6 633 220 312 61 20 chr15 6398353 6398451 -97096523 + MIR SINE MIR 11 112 -150 6 633 240 163 0 0 chr15 6398790 6398833 -97096141 + T-rich Low_complexity Low_complexity 1 43 0 6 633 333 0 0 0 chr15 6399374 6399411 -97095563 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 6 633 524 262 16 0 chr15 6399840 6399966 -97095008 + RSINE1 SINE B4 25 152 -13 6 633 279 344 105 37 chr15 6400066 6400256 -97094718 + MLT1B LTR MaLR 21 223 -167 6 633 980 211 105 14 chr15 6400258 6400641 -97094333 + Lx9 LINE L1 7060 7518 -126 6 633 299 113 19 0 chr15 6400641 6400694 -97094280 + (TATG)n Simple_repeat Simple_repeat 3 56 0 6 633 532 186 34 20 chr15 6400694 6400815 -97094159 + Lx9 LINE L1 7519 7643 -1 6 633 5847 34 0 0 chr15 6401680 6402365 -97092609 + L1Md_T LINE L1 5898 6582 0 6 633 196 385 0 10 chr15 6402579 6402676 -97092298 - MER5B DNA MER1_type -6 172 77 6 633 231 36 0 0 chr15 6402694 6402722 -97092252 + (TTCC)n Simple_repeat Simple_repeat 1 28 0 6 633 1181 101 6 0 chr15 6402722 6402901 -97092073 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 633 263 299 40 14 chr15 6402901 6402991 -97091983 - ID4_ SINE ID -55 97 6 6 633 885 273 10 0 chr15 6403019 6403228 -97091746 - B3 SINE B2 -5 211 1 6 633 1235 90 6 0 chr15 6403342 6403509 -97091465 - B2_Mm1t SINE B2 -25 168 1 6 633 1086 301 94 43 chr15 6403690 6404179 -97090795 - Lx7 LINE L1 -1061 6635 6122 6 633 366 245 74 11 chr15 6404344 6404439 -97090535 - MLT1E2 LTR MaLR -526 101 1 6 633 239 348 158 42 chr15 6404477 6405026 -97089948 - L2 LINE L2 -562 2857 2245 6 633 668 319 112 46 chr15 6405185 6405533 -97089441 + Lx8 LINE L1 6922 7292 -181 6 633 304 111 67 57 chr15 6405538 6405643 -97089331 + (TTAAA)n Simple_repeat Simple_repeat 5 110 0 6 633 1118 68 0 20 chr15 6405837 6405986 -97088988 + B1_Mm SINE Alu 2 147 0 6 633 342 115 0 0 chr15 6406066 6406118 -97088856 + (A)n Simple_repeat Simple_repeat 1 52 0 6 633 249 27 0 51 chr15 6406121 6406160 -97088814 + (GGAA)n Simple_repeat Simple_repeat 4 40 0 6 633 987 34 0 0 chr15 6406160 6406279 -97088695 + (GGGGA)n Simple_repeat Simple_repeat 3 121 0 6 633 468 0 0 0 chr15 6406279 6406330 -97088644 + (GAAA)n Simple_repeat Simple_repeat 1 52 0 6 633 346 25 23 70 chr15 6406977 6407063 -97087911 + (TTTTG)n Simple_repeat Simple_repeat 5 86 0 6 633 665 273 69 47 chr15 6407662 6407939 -97087035 + B4A SINE B4 4 286 -6 6 633 201 246 0 0 chr15 6407943 6408008 -97086966 + (CATATA)n Simple_repeat Simple_repeat 1 65 0 6 633 1156 199 18 5 chr15 6408578 6408800 -97086174 + URR1B DNA MER1_type 1 225 0 6 633 245 295 93 79 chr15 6410767 6410907 -97084067 + MER20 DNA MER1_type 1 142 -77 6 633 446 356 61 13 chr15 6411028 6411297 -97083677 - LTR84a LTR ERVL -13 748 458 6 633 383 341 45 63 chr15 6411366 6411588 -97083386 - LTR84a LTR ERVL -502 259 42 6 633 211 373 25 8 chr15 6411913 6412032 -97082942 - MIRc SINE MIR -18 250 130 6 633 278 307 161 21 chr15 6412240 6412383 -97082591 + RSINE1 SINE B4 3 165 0 6 633 451 264 0 0 chr15 6412449 6412536 -97082438 + PB1D10 SINE Alu 19 105 -12 6 633 1523 244 63 6 chr15 6412776 6413126 -97081848 - ORR1D2 LTR MaLR 0 370 1 6 633 234 0 0 0 chr15 6413675 6413701 -97081273 + (A)n Simple_repeat Simple_repeat 1 26 0 6 633 240 279 140 28 chr15 6413868 6413975 -97080999 + Charlie2a DNA MER1_type 1 119 -2742 6 633 416 19 19 0 chr15 6414016 6414069 -97080905 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 633 22 0 0 0 chr15 6414113 6414135 -97080839 + AT_rich Low_complexity Low_complexity 1 22 0 6 633 333 356 0 25 chr15 6414154 6414275 -97080699 - ID_B1 SINE B4 -106 118 1 6 633 672 277 167 43 chr15 6414484 6414944 -97080030 + Charlie2a DNA MER1_type 2013 2529 -332 6 633 290 252 142 28 chr15 6415040 6415146 -97079828 + Charlie2a DNA MER1_type 2727 2844 -17 6 633 180 0 0 0 chr15 6416299 6416319 -97078655 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 6 633 1036 58 0 73 chr15 6417549 6417699 -97077275 - B1_Mus1 SINE Alu -9 139 1 6 633 1062 24 0 0 chr15 6418219 6418344 -97076630 + (TC)n Simple_repeat Simple_repeat 2 126 0 6 633 542 329 14 0 chr15 6418511 6418654 -97076320 + RSINE1 SINE B4 13 157 -8 6 633 685 252 0 0 chr15 6418671 6418810 -97076164 - B1_Mur1 SINE Alu -9 140 2 6 633 296 304 139 108 chr15 6419002 6419334 -97075640 + ORR1D1 LTR MaLR 29 370 -4 6 633 496 348 13 21 chr15 6419486 6419724 -97075250 - MER46C DNA MER2_type -44 294 59 6 633 456 324 7 7 chr15 6420127 6420273 -97074701 - RSINE1 SINE B4 -15 150 5 6 633 275 299 112 0 chr15 6420418 6420582 -97074392 + MIR SINE MIR 53 236 -26 6 634 186 277 61 15 chr15 6422827 6422893 -97072081 + MIR SINE MIR 164 232 -30 6 634 1003 252 12 43 chr15 6423231 6423613 -97071361 - L1M3e LINE L1 -3675 3431 3064 6 634 192 77 0 0 chr15 6423659 6423685 -97071289 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 6 634 9668 35 5 3 chr15 6423883 6425805 -97069169 - L1Md_F2 LINE L1 -4 6578 4657 6 634 217 0 61 0 chr15 6425896 6425929 -97069045 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 6 634 645 291 166 15 chr15 6426645 6426977 -97067997 - L1M3e LINE L1 -6648 382 1 6 634 219 330 60 35 chr15 6427078 6427194 -97067780 - L2a LINE L2 -8 3418 3300 6 634 1430 64 11 0 chr15 6427375 6427563 -97067411 - B2_Mm1t SINE B2 -2 191 2 6 634 592 302 29 29 chr15 6427721 6427895 -97067079 + B3A SINE B2 25 198 0 6 634 1097 199 50 166 chr15 6428411 6428785 -97066189 + RMER19C LTR ERVK 1 296 -441 6 634 406 0 37 0 chr15 6428785 6428839 -97066135 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 6 634 490 304 77 118 chr15 6428839 6428936 -97066038 + RMER19C LTR ERVK 297 393 -344 6 634 540 238 70 23 chr15 6428941 6429070 -97065904 - B1_Mus2 SINE Alu -9 138 4 6 634 1311 84 22 0 chr15 6429470 6429648 -97065326 + B2_Mm2 SINE B2 1 182 -13 6 634 224 158 0 0 chr15 6429687 6429725 -97065249 + B2_Mm2 SINE B2 64 101 -94 6 634 189 0 0 0 chr15 6429749 6429770 -97065204 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 6 634 1704 174 151 52 chr15 6429800 6430183 -97064791 + MTC LTR MaLR 1 421 0 6 634 961 140 22 38 chr15 6430183 6430368 -97064606 + MTC-int LTR MaLR 1 182 -1076 6 634 23 33 0 0 chr15 6430613 6430643 -97064331 + AT_rich Low_complexity Low_complexity 1 30 0 6 634 1040 215 122 135 chr15 6430784 6431161 -97063813 + MTE2a LTR MaLR 3 374 -5 6 634 71 83 0 0 chr15 6431162 6431331 -97063643 + AT_rich Low_complexity Low_complexity 1 169 0 7 634 1780 288 165 53 chr15 6431342 6432481 -97062493 + MTE2a-int LTR MaLR 2 1574 -6 6 634 923 258 139 27 chr15 6432485 6432823 -97062151 + MTE2a LTR MaLR 3 378 -1 6 634 270 0 0 0 chr15 6432934 6432964 -97062010 + (TC)n Simple_repeat Simple_repeat 2 31 0 7 634 453 62 0 0 chr15 6432964 6433028 -97061946 + (TA)n Simple_repeat Simple_repeat 2 66 0 7 634 787 251 52 102 chr15 6433693 6434153 -97060821 + RMER2 LTR ERV1 1 539 -28 7 634 440 348 64 54 chr15 6434700 6434995 -97059979 - L2 LINE L2 -823 2596 2299 7 634 336 281 140 0 chr15 6435137 6435251 -97059723 + MER5A1 DNA MER1_type 2 131 -35 7 634 335 270 90 0 chr15 6435303 6435403 -97059571 - L2 LINE L2 -1332 2087 1979 7 634 282 248 6 0 chr15 6435447 6435509 -97059465 + ID4_ SINE ID 9 72 -11 7 634 182 301 210 25 chr15 6435555 6435712 -97059262 - L2 LINE L2 -1480 1939 1754 7 634 216 0 0 0 chr15 6435974 6435998 -97058976 + (A)n Simple_repeat Simple_repeat 1 24 0 7 634 523 269 94 29 chr15 6436064 6436340 -97058634 - L1ME2 LINE L1 -178 5986 5693 7 634 886 184 12 18 chr15 6437545 6437716 -97057258 + B2_Mm2 SINE B2 4 173 -22 7 634 918 0 0 0 chr15 6437716 6437818 -97057156 + (GAA)n Simple_repeat Simple_repeat 1 102 0 7 634 377 350 8 24 chr15 6437823 6437949 -97057025 + PB1 SINE Alu 2 125 -2 7 634 655 243 7 13 chr15 6437994 6438144 -97056830 + B1_Mur3 SINE Alu 1 149 0 7 634 376 316 0 0 chr15 6439424 6439519 -97055455 + MIR SINE MIR 160 254 -8 7 634 31 26 0 0 chr15 6440562 6440600 -97054374 + AT_rich Low_complexity Low_complexity 1 38 0 7 634 199 350 24 49 chr15 6440740 6440863 -97054111 + MIR3 SINE MIR 83 202 -6 7 634 4780 83 21 6 chr15 6441560 6442226 -97052748 - Lx LINE L1 0 6654 5979 7 634 198 0 0 0 chr15 6442334 6442356 -97052618 + (A)n Simple_repeat Simple_repeat 1 22 0 7 634 232 245 102 0 chr15 6442728 6442777 -97052197 - PB1 SINE Alu -57 70 17 7 634 384 276 29 0 chr15 6442806 6442911 -97052063 - PB1D10 SINE Alu 0 117 10 7 634 317 305 26 71 chr15 6443385 6443498 -97051476 + PB1D10 SINE Alu 9 116 -1 7 634 562 139 28 0 chr15 6443501 6443609 -97051365 + GA-rich Low_complexity Low_complexity 1 111 0 7 634 576 84 0 0 chr15 6443609 6443692 -97051282 + (TAGA)n Simple_repeat Simple_repeat 2 84 0 7 634 205 331 166 51 chr15 6444131 6444306 -97050668 + L4 LINE RTE 90 284 -1745 7 634 343 333 0 18 chr15 6444435 6444548 -97050426 + PB1D10 SINE Alu 7 117 0 7 634 405 0 0 0 chr15 6444611 6444656 -97050318 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 634 246 279 13 0 chr15 6446625 6446704 -97048270 - L1M5 LINE L1 -863 5283 5204 7 634 348 115 379 0 chr15 6447263 6447366 -97047608 - B2_Mm2 SINE B2 -7 188 47 7 634 1139 136 11 0 chr15 6447451 6447627 -97047347 - B2_Mm1t SINE B2 -14 179 2 7 634 921 88 7 0 chr15 6447635 6447772 -97047202 - B2_Mm1t SINE B2 -11 182 45 7 634 675 37 0 0 chr15 6447885 6447967 -97047007 + (TAGA)n Simple_repeat Simple_repeat 1 82 0 7 634 189 107 0 0 chr15 6447989 6448017 -97046957 + (TC)n Simple_repeat Simple_repeat 2 29 0 7 634 270 0 0 0 chr15 6449192 6449222 -97045752 + (TC)n Simple_repeat Simple_repeat 2 31 0 7 634 393 22 0 0 chr15 6449222 6449267 -97045707 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 634 264 77 0 0 chr15 6449267 6449306 -97045668 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 7 634 297 0 0 0 chr15 6449367 6449400 -97045574 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 634 274 341 73 84 chr15 6449400 6449675 -97045299 - B4 SINE B4 -19 273 2 7 634 271 274 0 35 chr15 6449704 6449791 -97045183 + A-rich Low_complexity Low_complexity 2 85 0 7 634 1142 114 11 38 chr15 6450318 6450501 -97044473 + B2_Mm1t SINE B2 2 179 -14 7 634 330 89 308 68 chr15 6450542 6450659 -97044315 + B2_Mm2 SINE B2 47 191 -4 7 634 842 187 109 27 chr15 6450696 6450916 -97044058 + 7SK RNA RNA 1 238 -93 7 634 2045 73 7 20 chr15 6451708 6452046 -97042928 - L1_Mus2 LINE L1 0 6566 6278 7 634 3420 99 12 2 chr15 6452046 6452552 -97042422 + L1_Mm LINE L1 3653 4163 -1720 7 634 6630 141 7 7 chr15 6452549 6454097 -97040877 - Lx LINE L1 -14 6640 5093 7 634 236 203 78 0 chr15 6454112 6454176 -97040798 - L1M2 LINE L1 -3330 2813 2745 7 634 29 90 0 0 chr15 6454283 6454361 -97040613 + AT_rich Low_complexity Low_complexity 1 78 0 7 634 311 292 0 0 chr15 6455193 6455282 -97039692 + PB1D10 SINE Alu 27 115 -2 7 634 6217 86 42 15 chr15 6455426 6457079 -97037895 - L1VL2 LINE L1 -1789 1826 122 7 634 8193 147 14 9 chr15 6457088 6458459 -97036515 - L1_Mur1 LINE L1 -771 5115 3738 7 634 201 328 95 8 chr15 6458591 6458717 -97036257 + MIRb SINE MIR 85 221 -47 7 634 518 323 145 0 chr15 6458925 6459235 -97035739 - MLT1A0 LTR MaLR 0 365 11 7 634 958 236 97 25 chr15 6459426 6459746 -97035228 - L1MB4 LINE L1 -31 6149 5808 7 634 229 319 0 130 chr15 6459760 6459868 -97035106 - ID_B1 SINE B4 -54 170 77 7 634 265 267 109 0 chr15 6459906 6460007 -97034967 - L1MB4 LINE L1 -397 5774 5663 7 634 397 305 9 0 chr15 6460022 6460127 -97034847 + ID_B1 SINE B4 1 106 -118 7 634 431 255 37 8 chr15 6460367 6460524 -97034450 - L1MB4 LINE L1 -658 5525 5333 7 634 29742 59 6 3 chr15 6460549 6461820 -97033154 - L1Md_A LINE L1 -830 5053 3767 7 634 8113 38 0 3 chr15 6461820 6462752 -97032222 + RLTR13B3 LTR ERVK 1 929 0 7 634 29742 92 10 9 chr15 6462752 6466267 -97028707 - L1Md_A LINE L1 -2117 3766 259 7 634 364 316 59 31 chr15 6466298 6466520 -97028454 - L1MB4 LINE L1 -1015 5125 4898 7 634 2870 72 0 0 chr15 6466712 6467073 -97027901 + L1_Mus1 LINE L1 6206 6566 -1 7 634 305 58 0 55 chr15 6467076 6467086 -97027888 + (A)n Simple_repeat Simple_repeat 1 10 0 7 634 1160 82 0 0 chr15 6467086 6467233 -97027741 + B1_Mus2 SINE Alu 1 147 0 7 634 305 58 0 55 chr15 6467233 6467277 -97027697 + (A)n Simple_repeat Simple_repeat 1 41 0 7 634 697 251 84 0 chr15 6467321 6467512 -97027462 + B3 SINE B2 6 212 -4 7 634 233 88 0 0 chr15 6467534 6467568 -97027406 + tRNA-Gly-GGA tRNA tRNA 5 38 -37 7 634 586 192 185 0 chr15 6468738 6468884 -97026090 - B3 SINE B2 -9 207 35 7 634 289 250 88 0 chr15 6469104 6469184 -97025790 - B3 SINE B2 -129 87 1 7 634 409 278 32 116 chr15 6469192 6469408 -97025566 - B3A SINE B2 0 198 1 7 634 395 291 27 13 chr15 6471129 6471279 -97023695 - MER5B DNA MER1_type -26 152 1 7 634 24 0 0 0 chr15 6472224 6472248 -97022726 + AT_rich Low_complexity Low_complexity 1 24 0 7 634 278 80 20 0 chr15 6472262 6472312 -97022662 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 7 634 686 124 41 12 chr15 6472430 6472601 -97022373 + (TAGA)n Simple_repeat Simple_repeat 4 179 0 7 634 447 19 0 0 chr15 6474953 6475005 -97019969 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 634 392 284 72 88 chr15 6475354 6475634 -97019340 - ORR1E LTR MaLR -3 376 91 7 634 270 303 13 0 chr15 6475808 6475884 -97019090 - MIRb SINE MIR -172 96 20 7 634 455 0 18 0 chr15 6476244 6476299 -97018675 + (TC)n Simple_repeat Simple_repeat 1 56 0 7 634 252 0 0 0 chr15 6476299 6476326 -97018648 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 634 861 221 116 0 chr15 6476431 6476630 -97018344 - URR1A DNA MER1_type -4 222 1 7 634 369 0 0 0 chr15 6476849 6476890 -97018084 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 634 300 293 30 0 chr15 6484158 6484257 -97010717 + PB1D9 SINE Alu 12 113 -7 7 634 567 277 0 7 chr15 6484965 6485103 -97009871 - RSINE1 SINE B4 -24 141 5 7 634 506 202 12 12 chr15 6485375 6485535 -97009439 + (TA)n Simple_repeat Simple_repeat 1 160 0 7 634 300 27 0 0 chr15 6485783 6485820 -97009154 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 634 1038 152 107 0 chr15 6485852 6486076 -97008898 - ORR1C2 LTR MaLR 0 384 137 7 634 15286 14 5 16 chr15 6486076 6488844 -97006130 + L1Md_A LINE L1 208 2938 -2945 7 634 988 17 0 0 chr15 6488844 6488964 -97006010 - MT2_Mm LTR ERVL -196 297 178 7 634 323 23 23 0 chr15 6488934 6488978 -97005996 - MT2_Mm LTR ERVL -227 248 204 7 634 1346 79 101 66 chr15 6488978 6489236 -97005738 - MT2_Mm LTR ERVL -226 267 1 7 634 310 290 46 57 chr15 6489271 6489465 -97005509 + MIR SINE MIR 57 248 -14 7 634 303 28 0 0 chr15 6489582 6489618 -97005356 + (GA)n Simple_repeat Simple_repeat 2 37 0 7 634 183 129 0 0 chr15 6490008 6490039 -97004935 + (A)n Simple_repeat Simple_repeat 1 31 0 7 634 1323 100 0 21 chr15 6493119 6493313 -97001661 - B2_Mm2 SINE B2 -4 191 2 7 634 572 143 54 0 chr15 6493542 6493654 -97001320 - B1_Mur3 SINE Alu 0 149 32 7 634 594 41 0 0 chr15 6493691 6493764 -97001210 + (ATTG)n Simple_repeat Simple_repeat 2 74 0 7 634 405 167 141 0 chr15 6493769 6493847 -97001127 - B1_Mus2 SINE Alu -6 141 53 7 634 293 195 26 0 chr15 6494122 6494199 -97000775 + (TA)n Simple_repeat Simple_repeat 2 80 0 7 634 684 188 12 12 chr15 6495648 6495815 -96999159 + Lx9 LINE L1 7478 7644 0 7 634 4612 4 0 0 chr15 6495852 6496345 -96998629 - MT2_Mm LTR ERVL 0 493 1 7 634 285 286 24 178 chr15 6496759 6497131 -96997843 - RLTR11A2 LTR ERVK -26 427 135 7 634 740 176 17 0 chr15 6497864 6498160 -96996814 + CT-rich Low_complexity Low_complexity 1 301 0 7 634 625 262 12 0 chr15 6498164 6498324 -96996650 + MER58B DNA MER1_type 174 335 -6 7 634 527 277 18 42 chr15 6498542 6498708 -96996266 + MER3 DNA MER1_type 43 204 -5 7 634 381 311 118 0 chr15 6498729 6498848 -96996126 + MTEb LTR MaLR 1 133 -246 7 634 485 282 74 11 chr15 6498887 6499063 -96995911 + MTEb LTR MaLR 193 379 0 7 634 414 57 0 0 chr15 6499607 6499660 -96995314 + (TC)n Simple_repeat Simple_repeat 1 53 0 7 634 391 230 0 13 chr15 6501108 6501212 -96993762 + B1F1 SINE Alu 5 103 -17 1 634 1099 166 125 74 chr15 6501295 6501535 -96993439 - ORR1A4 LTR MaLR -1 328 89 2 634 396 0 0 0 chr15 6501535 6501579 -96993395 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 634 1099 166 125 74 chr15 6501579 6501650 -96993324 - ORR1A4 LTR MaLR -241 88 1 2 634 207 0 0 0 chr15 6501738 6501761 -96993213 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 4 634 1007 144 156 0 chr15 6502743 6502923 -96992051 + B3 SINE B2 4 211 -5 5 634 486 0 0 0 chr15 6503525 6503579 -96991395 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 634 485 303 73 62 chr15 6504380 6504801 -96990173 + MTE2a LTR MaLR 1 406 -13 7 634 868 225 35 44 chr15 6504991 6505219 -96989755 + Lx7 LINE L1 7135 7360 -336 8 634 408 20 0 0 chr15 6505257 6505306 -96989668 + (TG)n Simple_repeat Simple_repeat 1 49 0 9 634 305 252 82 27 chr15 6505361 6505471 -96989503 + Lx7 LINE L1 7565 7680 -16 8 634 331 293 0 0 chr15 6505909 6505991 -96988983 + ID4_ SINE ID 2 83 0 1 634 578 274 37 64 chr15 6506154 6506341 -96988633 - B3A SINE B2 -16 182 1 1 634 1150 78 0 0 chr15 6507294 6507436 -96987538 + B1_Mus1 SINE Alu 1 142 -6 1 634 341 350 10 57 chr15 6508722 6508788 -96986186 - MER3 DNA MER1_type -3 206 142 1 634 346 219 143 0 chr15 6508788 6508893 -96986081 + PB1 SINE Alu 1 120 -7 1 634 341 350 10 57 chr15 6508893 6509020 -96985954 - MER3 DNA MER1_type -68 141 22 1 634 673 279 72 2 chr15 6509774 6509968 -96985006 + B3A SINE B2 7 216 0 1 634 21 36 0 0 chr15 6510134 6510162 -96984812 + AT_rich Low_complexity Low_complexity 1 28 0 1 634 547 320 26 0 chr15 6510203 6510356 -96984618 - RSINE1 SINE B4 -6 159 3 1 634 364 391 13 0 chr15 6510617 6510773 -96984201 + Charlie1 DNA MER1_type 9 166 -2615 1 634 655 272 80 11 chr15 6510768 6511054 -96983920 + Charlie1 DNA MER1_type 2334 2639 -142 1 634 326 123 0 17 chr15 6511544 6511602 -96983372 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 634 385 214 10 10 chr15 6512005 6512109 -96982865 + GA-rich Low_complexity Low_complexity 4 107 0 2 634 1063 203 19 14 chr15 6513027 6513242 -96981732 - B3 SINE B2 0 216 1 2 634 954 247 49 49 chr15 6514292 6514577 -96980397 - Lx8 LINE L1 -10 7463 7179 2 634 21 57 0 0 chr15 6514865 6514900 -96980074 + AT_rich Low_complexity Low_complexity 1 35 0 2 634 932 224 123 8 chr15 6515682 6515943 -96979031 - Lx9 LINE L1 -59 7585 7295 2 634 189 0 0 0 chr15 6515948 6515969 -96979005 + (T)n Simple_repeat Simple_repeat 1 21 0 2 634 480 282 84 18 chr15 6516002 6516168 -96978806 - B3 SINE B2 -38 178 2 2 634 197 57 50 118 chr15 6516363 6516482 -96978492 + (TTTG)n Simple_repeat Simple_repeat 2 112 0 2 634 309 0 0 89 chr15 6516455 6516485 -96978489 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 2 634 1203 62 0 0 chr15 6516485 6516631 -96978343 - B1_Mus2 SINE Alu -1 146 1 2 634 309 0 0 89 chr15 6516631 6516656 -96978318 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 3 634 414 0 0 0 chr15 6517775 6517821 -96977153 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 634 234 81 0 0 chr15 6517823 6517860 -96977114 + (GA)n Simple_repeat Simple_repeat 2 38 0 3 634 282 284 42 10 chr15 6517986 6518082 -96976892 - B4A SINE B4 -191 101 3 3 634 980 186 164 5 chr15 6518220 6518415 -96976559 + URR1A DNA MER1_type 1 226 0 3 634 243 329 88 8 chr15 6520331 6520491 -96974483 + MIR SINE MIR 36 217 -51 3 634 333 0 0 0 chr15 6520671 6520708 -96974266 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 634 262 250 26 0 chr15 6521360 6521436 -96973538 + MIR SINE MIR 70 147 -115 3 634 813 262 147 63 chr15 6522062 6522396 -96972578 + MTEb LTR MaLR 1 362 -17 3 634 244 150 48 32 chr15 6522680 6522742 -96972232 - MLT1C LTR MaLR 0 467 405 3 634 1132 84 0 6 chr15 6522906 6523074 -96971900 - B2_Mm2 SINE B2 0 195 29 4 634 327 130 0 0 chr15 6525383 6525437 -96969537 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 634 376 213 13 0 chr15 6526567 6526642 -96968332 + MTEa LTR MaLR 284 359 -20 4 634 352 273 33 0 chr15 6526911 6527032 -96967942 + B1F2 SINE Alu 2 126 -23 4 634 213 277 0 0 chr15 6527302 6527349 -96967625 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 634 305 185 0 0 chr15 6527349 6527403 -96967571 - HAL1-3A_ME LINE L1 -840 2018 1965 4 634 378 237 75 0 chr15 6527628 6527721 -96967253 - BC1_Mm scRNA scRNA -49 103 4 4 634 210 348 97 9 chr15 6527795 6527908 -96967066 - MIRb SINE MIR -120 148 26 4 634 411 21 0 0 chr15 6528504 6528552 -96966422 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 634 218 338 0 0 chr15 6528555 6528623 -96966351 - ID4 SINE ID -13 70 3 4 634 549 246 67 62 chr15 6528711 6528896 -96966078 - ID_B1 SINE B4 -14 210 27 5 634 666 25 0 0 chr15 6528896 6528976 -96965998 + (TC)n Simple_repeat Simple_repeat 1 80 0 5 634 549 246 67 62 chr15 6528976 6528998 -96965976 - ID SINE ID -198 26 4 5 634 251 28 28 0 chr15 6531718 6531754 -96963220 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 5 634 970 179 117 24 chr15 6532127 6532333 -96962641 - URR1B DNA MER1_type 0 225 1 5 634 534 217 75 0 chr15 6532338 6532472 -96962502 + ID_B1 SINE B4 85 224 0 5 634 1207 182 5 14 chr15 6534393 6534610 -96960364 + B3 SINE B2 1 215 -1 5 634 396 0 0 0 chr15 6535186 6535230 -96959744 + (TC)n Simple_repeat Simple_repeat 1 44 0 5 634 233 339 50 0 chr15 6535617 6535738 -96959236 - HAL1b LINE L1 -914 1095 969 5 634 472 144 255 19 chr15 6538501 6538607 -96956367 - B1_Mm SINE Alu -14 133 3 5 634 213 286 16 0 chr15 6539019 6539082 -96955892 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 634 403 255 36 108 chr15 6539171 6539338 -96955636 - B3A SINE B2 -5 211 57 6 634 2484 52 19 0 chr15 6539770 6540078 -96954896 - L1_Mus4 LINE L1 -398 6238 5925 6 634 1110 66 47 23 chr15 6540078 6540249 -96954725 + L1_Mus4 LINE L1 6462 6636 0 6 634 2760 92 42 2 chr15 6540427 6540830 -96954144 - L1_Mus3 LINE L1 -18 6620 6202 6 634 468 123 0 0 chr15 6542194 6542267 -96952707 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 6 634 282 327 93 0 chr15 6543072 6543222 -96951752 + MIRb SINE MIR 71 234 -34 6 634 498 17 0 0 chr15 6543256 6543315 -96951659 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 634 677 239 7 0 chr15 6543609 6543751 -96951223 + B1_Mur2 SINE Alu 5 147 -2 6 634 1028 200 55 10 chr15 6545099 6545301 -96949673 - B3 SINE B2 -5 211 1 6 634 256 246 0 0 chr15 6546848 6546905 -96948069 - MIRm SINE MIR -9 267 211 6 634 1289 73 6 0 chr15 6547469 6547647 -96947327 + (TCC)n Simple_repeat Simple_repeat 1 179 0 7 634 183 293 35 0 chr15 6547743 6547801 -96947173 + MIR SINE MIR 39 98 -164 7 634 429 66 0 0 chr15 6547806 6547867 -96947107 + (T)n Simple_repeat Simple_repeat 1 61 0 7 634 5735 75 38 5 chr15 6547871 6548662 -96946312 - Lx3_Mus LINE L1 -5 7004 6188 7 634 637 50 0 0 chr15 6548662 6548742 -96946232 + Lx3_Mus LINE L1 6102 6181 -828 7 634 304 318 15 22 chr15 6548756 6548891 -96946083 + MIR SINE MIR 115 248 -14 7 634 231 88 0 0 chr15 6549009 6549043 -96945931 + (A)n Simple_repeat Simple_repeat 1 34 0 7 634 617 210 22 0 chr15 6549286 6549424 -96945550 + B1_Mur1 SINE Alu 9 149 0 7 634 216 0 0 0 chr15 6549697 6549721 -96945253 + (T)n Simple_repeat Simple_repeat 1 24 0 7 634 5424 70 8 1 chr15 6549746 6550450 -96944524 - L1_Mus1 LINE L1 0 6567 5859 7 634 789 268 29 0 chr15 6550700 6550905 -96944069 + B3 SINE B2 1 211 -5 7 634 342 266 153 0 chr15 6551023 6551147 -96943827 + B1_Mur2 SINE Alu 7 149 0 7 634 1251 76 52 37 chr15 6553185 6553376 -96941598 + B2_Mm2 SINE B2 2 195 0 8 634 612 125 0 0 chr15 6553376 6553472 -96941502 + (GA)n Simple_repeat Simple_repeat 2 97 0 8 635 204 293 0 17 chr15 6553907 6553966 -96941008 + (CA)n Simple_repeat Simple_repeat 1 58 0 8 635 255 125 0 0 chr15 6554219 6554259 -96940715 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 635 388 302 39 8 chr15 6555195 6555325 -96939649 + RSINE1 SINE B4 3 136 -29 8 635 24 67 0 0 chr15 6555413 6555458 -96939516 + AT_rich Low_complexity Low_complexity 1 45 0 8 635 309 308 83 7 chr15 6555626 6555770 -96939204 - MER5A DNA MER1_type -8 181 27 8 635 207 0 0 0 chr15 6555833 6555856 -96939118 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 8 635 3178 33 31 0 chr15 6556001 6556360 -96938614 + L1Md_F3 LINE L1 6200 6569 -15 8 635 783 279 114 8 chr15 6557152 6557416 -96937558 + B4A SINE B4 1 292 0 8 635 559 236 0 9 chr15 6557587 6557698 -96937276 + PB1D10 SINE Alu 1 110 -7 9 635 361 210 33 60 chr15 6557960 6558330 -96936644 + (CTCTG)n Simple_repeat Simple_repeat 1 359 0 9 635 363 204 71 36 chr15 6558094 6558262 -96936712 + (CACTG)n Simple_repeat Simple_repeat 3 176 0 9 635 349 210 71 36 chr15 6558314 6558482 -96936492 + (CACTG)n Simple_repeat Simple_repeat 3 176 0 9 635 349 187 70 35 chr15 6558444 6558616 -96936358 + (CTCTG)n Simple_repeat Simple_repeat 3 180 0 9 635 236 120 0 20 chr15 6559087 6559138 -96935836 + (TTTTTG)n Simple_repeat Simple_repeat 3 52 0 9 635 1244 74 0 0 chr15 6559141 6559289 -96935685 - B1_Mus1 SINE Alu 0 148 1 9 635 412 267 75 19 chr15 6559321 6559428 -96935546 + B1_Mus2 SINE Alu 35 147 0 9 635 227 100 60 0 chr15 6559429 6559479 -96935495 + A-rich Low_complexity Low_complexity 5 57 0 9 635 527 307 61 32 chr15 6559483 6559793 -96935181 + L1MA6 LINE L1 5939 6257 -43 9 635 634 320 0 0 chr15 6559989 6560139 -96934835 - RSINE1 SINE B4 -13 152 3 9 635 202 232 41 48 chr15 6561053 6561198 -96933776 + (CACAC)n Simple_repeat Simple_repeat 5 148 0 1 635 270 215 38 65 chr15 6561315 6561499 -96933475 + (CACAC)n Simple_repeat Simple_repeat 1 179 0 1 635 447 288 18 9 chr15 6561536 6561648 -96933326 - B4A SINE B4 -178 114 2 1 635 1222 48 14 0 chr15 6562019 6562164 -96932810 - B1_Mus2 SINE Alu 0 147 1 1 635 598 285 7 26 chr15 6562193 6562348 -96932626 + RSINE1 SINE B4 3 154 -11 1 635 259 266 15 15 chr15 6562445 6562510 -96932464 + B4A SINE B4 2 66 -226 1 635 1147 161 0 146 chr15 6562509 6562756 -96932218 + URR1A DNA MER1_type 16 226 0 1 635 26 0 0 0 chr15 6563828 6563854 -96931120 + AT_rich Low_complexity Low_complexity 1 26 0 1 635 371 261 17 9 chr15 6563991 6564107 -96930867 + L1M4 LINE L1 5695 5811 -367 1 635 1095 128 146 20 chr15 6564318 6564517 -96930457 + URR1A DNA MER1_type 3 226 0 1 635 327 178 0 0 chr15 6565462 6565563 -96929411 + (TA)n Simple_repeat Simple_repeat 1 101 0 1 635 533 307 54 27 chr15 6565655 6565839 -96929135 + B3 SINE B2 3 191 -25 1 635 693 343 86 53 chr15 6567514 6567969 -96927005 - MER63C DNA AcHobo -216 714 245 1 635 346 283 43 0 chr15 6568046 6568138 -96926836 + L2a LINE L2 3326 3421 -5 1 635 237 315 54 0 chr15 6568147 6568258 -96926716 - MIR SINE MIR -17 245 129 1 635 233 330 74 50 chr15 6568377 6568414 -96926560 + B4 SINE B4 56 95 -197 1 635 360 294 43 0 chr15 6568414 6568506 -96926468 + B1_Mur2 SINE Alu 3 98 -51 1 635 1719 27 0 0 chr15 6568804 6568987 -96925987 + B2_Mm1t SINE B2 2 184 -9 1 635 243 0 0 0 chr15 6569010 6569037 -96925937 + (A)n Simple_repeat Simple_repeat 1 27 0 1 635 1420 76 0 21 chr15 6569041 6569229 -96925745 + B2_Mm2 SINE B2 2 185 -10 1 635 4163 169 137 38 chr15 6569889 6570852 -96924122 - MTC-int LTR MaLR -199 1059 2 1 635 1912 159 113 3 chr15 6570851 6571222 -96923752 - MTC LTR MaLR 0 421 10 1 635 3231 20 0 0 chr15 6571239 6571581 -96923393 - ORR1A0 LTR MaLR -4 342 1 1 635 28 0 0 0 chr15 6571986 6572014 -96922960 + AT_rich Low_complexity Low_complexity 1 28 0 1 635 549 250 0 41 chr15 6572222 6572368 -96922606 - B1F1 SINE Alu 0 149 10 1 635 287 274 0 0 chr15 6572576 6572638 -96922336 - MER77 LTR ERVL -4 603 542 1 635 928 58 8 0 chr15 6573235 6573355 -96921619 - B1_Mus1 SINE Alu -1 147 27 1 635 342 0 0 0 chr15 6573502 6573540 -96921434 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 635 1024 124 40 34 chr15 6574212 6574387 -96920587 + B2_Mm2 SINE B2 1 176 -19 1 635 256 332 130 45 chr15 6574677 6575078 -96919896 - L2 LINE L2 -373 3046 2612 1 635 201 281 88 22 chr15 6575545 6575636 -96919338 - L2 LINE L2 -1628 1791 1695 1 635 1067 73 0 0 chr15 6576582 6576719 -96918255 - L1Md_F2 LINE L1 -12 6570 6434 1 635 27 0 0 0 chr15 6576751 6576778 -96918196 + AT_rich Low_complexity Low_complexity 1 27 0 1 635 363 182 38 25 chr15 6576830 6576909 -96918065 - ID4_ SINE ID -3 80 1 1 635 316 291 8 60 chr15 6577870 6577987 -96916987 + RSINE1 SINE B4 54 164 -1 1 635 264 77 0 0 chr15 6578011 6578050 -96916924 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 1 635 2252 148 49 31 chr15 6578299 6578446 -96916528 - RMER10B LTR ERVL -1 397 237 1 635 180 0 0 0 chr15 6578446 6578466 -96916508 + (G)n Simple_repeat Simple_repeat 1 20 0 1 635 2252 148 49 31 chr15 6578466 6578708 -96916266 - RMER10B LTR ERVL -162 236 2 1 635 1080 159 120 34 chr15 6579058 6579266 -96915708 - URR1A DNA MER1_type 0 226 1 1 635 246 301 14 14 chr15 6579430 6579504 -96915470 + PB1D10 SINE Alu 14 87 -30 1 635 311 243 167 61 chr15 6579643 6579823 -96915151 - L1MC5 LINE L1 -464 7497 7299 1 635 369 238 48 0 chr15 6579885 6579969 -96915005 - B3 SINE B2 0 216 129 1 635 310 284 134 12 chr15 6580626 6580797 -96914177 - L1M5 LINE L1 -586 5608 5417 1 635 272 269 103 30 chr15 6580891 6581056 -96913918 - Lx8 LINE L1 -61 7412 7236 1 635 2412 129 84 5 chr15 6581279 6581662 -96913312 - MTC LTR MaLR -8 413 1 1 635 21 0 0 0 chr15 6582038 6582059 -96912915 + AT_rich Low_complexity Low_complexity 1 21 0 1 635 660 123 0 0 chr15 6583050 6583164 -96911810 + (TC)n Simple_repeat Simple_repeat 1 114 0 1 635 387 0 0 0 chr15 6583164 6583207 -96911767 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 635 2117 154 83 27 chr15 6583328 6583701 -96911273 - ORR1B1 LTR MaLR 0 394 1 1 635 3347 171 37 25 chr15 6583738 6583868 -96911106 - Lx5 LINE L1 -2 7048 6916 1 635 432 0 0 0 chr15 6583868 6583916 -96911058 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 635 3347 171 37 25 chr15 6583916 6584379 -96910595 - Lx5 LINE L1 -135 6915 6448 1 635 231 203 24 48 chr15 6584826 6584909 -96910065 + GA-rich Low_complexity Low_complexity 1 81 0 1 635 368 331 71 31 chr15 6585614 6585810 -96909164 + MIRb SINE MIR 9 212 -56 1 635 234 178 0 0 chr15 6586066 6586111 -96908863 + A-rich Low_complexity Low_complexity 4 48 0 1 635 834 171 212 0 chr15 6586429 6586599 -96908375 + B3 SINE B2 1 206 -10 1 635 1192 69 14 0 chr15 6586975 6587120 -96907854 + B1_Mus1 SINE Alu 2 148 0 1 635 264 122 0 0 chr15 6587120 6587161 -96907813 + (A)n Simple_repeat Simple_repeat 1 41 0 1 635 675 94 0 0 chr15 6587761 6587857 -96907117 + (GGGA)n Simple_repeat Simple_repeat 4 99 0 1 635 910 309 48 7 chr15 6588053 6588363 -96906611 - Lx5 LINE L1 -18 7032 6710 1 635 402 161 0 0 chr15 6588398 6588491 -96906483 + (TG)n Simple_repeat Simple_repeat 2 94 0 1 635 593 259 30 0 chr15 6588534 6588700 -96906274 - Lx5 LINE L1 -345 6705 6535 1 635 659 138 0 16 chr15 6589030 6589155 -96905819 + CT-rich Low_complexity Low_complexity 4 126 0 1 635 411 125 0 0 chr15 6589168 6589240 -96905734 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 635 1010 317 66 29 chr15 6589255 6589769 -96905205 - Lx8 LINE L1 -3 7470 6938 1 635 1289 103 16 37 chr15 6589925 6590116 -96904858 - B2_Mm2 SINE B2 -7 188 2 1 635 294 29 0 0 chr15 6590957 6590992 -96903982 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 635 31 0 0 0 chr15 6592026 6592057 -96902917 + AT_rich Low_complexity Low_complexity 1 31 0 1 635 216 264 0 19 chr15 6592793 6592847 -96902127 + CT-rich Low_complexity Low_complexity 2 54 0 1 635 1905 105 0 4 chr15 6593123 6593391 -96901583 - L1_Mm LINE L1 -1133 4750 4484 1 635 354 340 7 48 chr15 6594138 6594283 -96900691 + B1F SINE Alu 1 139 -10 1 635 30 0 0 0 chr15 6594367 6594397 -96900577 + AT_rich Low_complexity Low_complexity 1 30 0 1 635 34 72 0 0 chr15 6595369 6595438 -96899536 + AT_rich Low_complexity Low_complexity 1 69 0 1 635 338 292 8 8 chr15 6595898 6596019 -96898955 + (TG)n Simple_repeat Simple_repeat 1 121 0 1 635 186 43 0 0 chr15 6596611 6596634 -96898340 + (TC)n Simple_repeat Simple_repeat 1 23 0 1 635 311 234 0 0 chr15 6596884 6596948 -96898026 - ORR1D2-int LTR MaLR -1303 67 4 1 635 630 244 42 53 chr15 6597000 6597190 -96897784 - ORR1D2 LTR MaLR -182 188 1 1 635 616 201 13 7 chr15 6597682 6597832 -96897142 + CT-rich Low_complexity Low_complexity 1 151 0 1 635 904 196 7 0 chr15 6597854 6598002 -96896972 - B1_Mur4 SINE Alu 0 150 2 1 635 1168 40 23 11 chr15 6598197 6598373 -96896601 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 1 635 375 23 0 0 chr15 6598374 6598418 -96896556 + (CATA)n Simple_repeat Simple_repeat 1 44 0 1 635 237 65 0 0 chr15 6598672 6598703 -96896271 + (TTCC)n Simple_repeat Simple_repeat 3 33 0 1 635 1314 98 17 0 chr15 6599748 6599922 -96895052 + B2_Mm1t SINE B2 2 178 -15 1 635 967 46 15 30 chr15 6599923 6600057 -96894917 + L1_Mus1 LINE L1 6436 6567 0 1 635 22 35 0 0 chr15 6600797 6600826 -96894148 + AT_rich Low_complexity Low_complexity 1 29 0 1 635 632 212 105 8 chr15 6601576 6601709 -96893265 + B1_Mur2 SINE Alu 2 147 -2 1 635 1076 295 25 37 chr15 6601977 6602301 -96892673 - MTE2a LTR MaLR 0 379 60 1 635 286 243 61 35 chr15 6602720 6602835 -96892139 - Lx9 LINE L1 -8 7636 7519 1 635 495 48 0 0 chr15 6602835 6602897 -96892077 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 635 531 98 24 0 chr15 6602903 6602985 -96891989 - Lx9 LINE L1 -227 7417 7334 1 635 706 255 3 48 chr15 6603299 6603507 -96891467 + B3A SINE B2 13 210 -6 1 635 216 0 0 0 chr15 6604862 6604886 -96890088 + (A)n Simple_repeat Simple_repeat 1 24 0 1 635 734 219 6 29 chr15 6604924 6604945 -96890029 - RLTR11B LTR ERVK 0 453 435 1 635 2044 117 8 112 chr15 6604945 6605312 -96889662 - ORR1A4 LTR MaLR 0 329 1 1 635 734 229 33 42 chr15 6605312 6605508 -96889466 - RLTR11B LTR ERVK -38 490 284 1 635 1324 106 0 0 chr15 6605710 6605890 -96889084 - L1_Mus4 LINE L1 -368 6268 6089 1 635 3126 86 9 5 chr15 6605890 6606321 -96888653 + L1_Mus4 LINE L1 5658 6090 -548 1 635 380 158 31 10 chr15 6606363 6606459 -96888515 + CT-rich Low_complexity Low_complexity 4 101 0 1 635 363 106 0 0 chr15 6606491 6606557 -96888417 + (T)n Simple_repeat Simple_repeat 1 66 0 1 635 366 23 0 0 chr15 6607578 6607621 -96887353 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 635 411 231 0 0 chr15 6607675 6607753 -96887221 + RSINE1 SINE B4 48 125 -40 1 635 676 234 39 33 chr15 6608205 6608386 -96886588 - B3A SINE B2 -16 182 1 1 635 180 317 46 46 chr15 6608575 6608684 -96886290 + L3 LINE CR1 3349 3457 -1032 1 635 701 222 18 28 chr15 6610902 6611065 -96883909 + ID_B1 SINE B4 78 248 -44 1 635 207 0 0 0 chr15 6611138 6611161 -96883813 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1 635 946 154 14 7 chr15 6611504 6611648 -96883326 - B1_Mur1 SINE Alu -3 146 2 1 635 283 225 50 0 chr15 6611684 6611764 -96883210 - B4 SINE B4 -207 85 2 1 635 2186 139 64 5 chr15 6611920 6612311 -96882663 - MTC LTR MaLR 0 421 8 2 635 1180 75 0 0 chr15 6612396 6612543 -96882431 - B1_Mus1 SINE Alu 0 148 2 2 635 347 343 37 0 chr15 6612648 6612782 -96882192 + ID_B1 SINE B4 79 217 -7 2 635 436 252 146 110 chr15 6612791 6613072 -96881902 + B4 SINE B4 1 291 -1 2 635 369 109 0 0 chr15 6613382 6613437 -96881537 + (TTG)n Simple_repeat Simple_repeat 3 57 0 2 635 253 271 0 0 chr15 6613470 6613529 -96881445 - B1F SINE Alu -90 59 1 2 635 696 307 45 4 chr15 6614592 6614860 -96880114 + B4 SINE B4 2 280 -12 2 635 868 152 20 14 chr15 6614967 6615114 -96879860 - B1_Mur3 SINE Alu 0 149 2 2 635 23 0 0 0 chr15 6615482 6615505 -96879469 + AT_rich Low_complexity Low_complexity 1 23 0 2 635 239 0 0 31 chr15 6615965 6615997 -96878977 + (TCCCC)n Simple_repeat Simple_repeat 2 32 0 2 635 288 371 32 26 chr15 6616232 6616387 -96878587 + LTR16B2 LTR ERVL 1 156 -306 2 635 867 232 115 123 chr15 6616902 6617193 -96877781 + MTEa LTR MaLR 2 278 -101 2 635 1551 150 124 40 chr15 6617193 6617540 -96877434 - ORR1C1 LTR MaLR 0 378 3 2 635 867 232 115 123 chr15 6617540 6617621 -96877353 + MTEa LTR MaLR 279 370 -9 2 635 180 111 0 0 chr15 6617752 6617779 -96877195 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 2 635 553 176 42 126 chr15 6618558 6618701 -96876273 - B3A SINE B2 -67 131 1 2 635 476 240 16 40 chr15 6619455 6619581 -96875393 + B3A SINE B2 60 182 -16 2 635 663 154 0 0 chr15 6619581 6619698 -96875276 + (CA)n Simple_repeat Simple_repeat 1 117 0 2 635 801 176 16 27 chr15 6619730 6619917 -96875057 - Lx2B LINE L1 -1 6999 6815 2 635 422 187 142 9 chr15 6620036 6620149 -96874825 + B1_Mur4 SINE Alu 22 149 -1 2 635 460 140 41 116 chr15 6620835 6620956 -96874018 + MT2B LTR ERVL 146 257 -344 2 635 743 128 0 151 chr15 6620860 6621026 -96873948 + B1_Mur3 SINE Alu 9 149 0 2 635 628 189 14 0 chr15 6621032 6621175 -96873799 + GA-rich Low_complexity Low_complexity 2 146 0 2 635 454 248 10 0 chr15 6621192 6621293 -96873681 - RLTR14 LTR ERV1 0 382 281 2 635 418 260 77 0 chr15 6621933 6622037 -96872937 + PB1D10 SINE Alu 1 112 -5 2 635 33547 87 13 7 chr15 6622078 6628199 -96866775 + L1_Mus1 LINE L1 403 6567 0 2 635 308 311 0 36 chr15 6628275 6628385 -96866589 + PB1 SINE Alu 21 126 -1 2 635 23 0 0 0 chr15 6628794 6628817 -96866157 + AT_rich Low_complexity Low_complexity 1 23 0 2 635 1410 189 31 151 chr15 6628856 6629279 -96865695 + ORR1D1 LTR MaLR 1 372 -2 2 635 192 40 0 0 chr15 6629303 6629328 -96865646 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 635 279 36 71 18 chr15 6629693 6629749 -96865225 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 2 635 4448 8 0 0 chr15 6629807 6630289 -96864685 + LTRIS_Mm LTR ERV1 1 482 0 2 635 2657 27 0 0 chr15 6630289 6630589 -96864385 + MuRRS-int LTR ERV1 1 300 -4390 2 635 23882 21 5 8 chr15 6630586 6633299 -96861675 + MuRRS-int LTR ERV1 574 3277 -1413 2 635 12294 35 3 6 chr15 6633331 6634752 -96860222 + MuRRS-int LTR ERV1 3273 4690 0 2 635 4380 19 0 0 chr15 6634752 6635234 -96859740 + LTRIS_Mm LTR ERV1 1 482 0 2 635 678 259 14 0 chr15 6635901 6636040 -96858934 + RSINE1 SINE B4 9 149 -16 2 635 1830 181 72 17 chr15 6636251 6636599 -96858375 - ORR1B2 LTR MaLR 0 367 1 2 635 914 288 33 84 chr15 6636910 6637304 -96857670 + MTE2b LTR MaLR 1 374 -5 2 635 539 293 131 20 chr15 6637366 6637610 -96857364 + MER68 LTR ERVL 1 271 -292 2 635 236 29 0 0 chr15 6637629 6637664 -96857310 + L1Md_F2 LINE L1 6537 6571 -11 2 635 232 298 38 19 chr15 6637671 6637777 -96857197 + MER68 LTR ERVL 261 368 -195 2 635 400 295 63 114 chr15 6637790 6638027 -96856947 - MLT1J LTR MaLR -243 269 45 2 635 3350 30 5 8 chr15 6638038 6638435 -96856539 + MTA_Mm LTR MaLR 1 396 0 2 635 427 280 11 171 chr15 6638599 6638780 -96856194 + ID_B1 SINE B4 70 221 -3 2 635 1027 206 148 33 chr15 6639203 6639534 -96855440 + ORR1D1 LTR MaLR 2 370 -4 2 635 1165 63 0 0 chr15 6639582 6639724 -96855250 - B1_Mus1 SINE Alu -6 142 1 2 635 33 25 0 0 chr15 6639726 6639766 -96855208 + AT_rich Low_complexity Low_complexity 1 40 0 2 635 285 51 0 0 chr15 6639920 6639959 -96855015 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 635 239 315 68 0 chr15 6640136 6640209 -96854765 - B4 SINE B4 -214 78 1 2 635 230 214 79 56 chr15 6640212 6640301 -96854673 - L1MEf LINE L1 -4724 1476 1386 2 635 395 188 24 0 chr15 6640570 6640655 -96854319 - B1F SINE Alu -52 97 11 2 635 728 301 118 53 chr15 6640948 6641474 -96853500 - L1ME1 LINE L1 -222 5957 5398 2 635 633 294 124 10 chr15 6641749 6642137 -96852837 - L1ME1 LINE L1 -1002 5144 4713 2 635 21 0 0 0 chr15 6642413 6642434 -96852540 + AT_rich Low_complexity Low_complexity 1 21 0 2 635 244 278 43 70 chr15 6642442 6642628 -96852346 - B3A SINE B2 -17 181 1 2 635 409 329 65 37 chr15 6642747 6643129 -96851845 - L1ME1 LINE L1 -3151 2995 2603 2 635 1133 198 98 70 chr15 6643141 6643178 -96851796 - ORR1D1 LTR MaLR -5 369 340 2 635 1360 106 16 0 chr15 6643178 6643367 -96851607 + B2_Mm2 SINE B2 1 192 -3 2 635 1133 198 98 70 chr15 6643367 6643688 -96851286 - ORR1D1 LTR MaLR -35 339 1 2 635 242 328 85 15 chr15 6643786 6643987 -96850987 - L1ME1 LINE L1 -3660 2486 2272 2 635 3733 39 5 2 chr15 6644152 6644587 -96850387 + RLTR10C LTR ERVK 1 436 0 2 635 1413 71 13 20 chr15 6644587 6644852 -96850122 + MMERVK10C-int LTR ERVK 1 343 -7238 2 635 785 195 5 10 chr15 6644850 6645042 -96849932 + MMERVK10C-int LTR ERVK 729 919 -6662 2 635 489 122 0 43 chr15 6645047 6645141 -96849833 + MMERVK10C-int LTR ERVK 863 952 -6629 2 635 686 246 153 72 chr15 6645231 6645617 -96849357 + MMERVK10C-int LTR ERVK 2079 2425 -4819 2 635 331 155 17 0 chr15 6645601 6645659 -96849315 + MMERVK10C-int LTR ERVK 1721 1779 -5627 2 635 45476 18 1 10 chr15 6645666 6650815 -96844159 + MMERVK10C-int LTR ERVK 1885 7581 0 2 635 3440 39 0 130 chr15 6650815 6651316 -96843658 + RLTR10C LTR ERVK 1 436 0 2 635 738 126 86 36 chr15 6651445 6651585 -96843389 + B1_Mus1 SINE Alu 2 148 0 2 635 243 170 0 0 chr15 6651954 6652001 -96842973 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 635 207 0 0 0 chr15 6652630 6652653 -96842321 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 635 1019 111 111 0 chr15 6652653 6652825 -96842149 - B2_Mm2 SINE B2 -3 192 2 2 635 390 325 126 61 chr15 6653017 6653101 -96841873 + Charlie7 DNA MER1_type 319 401 -2211 2 635 489 241 45 0 chr15 6653101 6653213 -96841761 + PB1D10 SINE Alu 1 117 0 2 635 390 325 126 61 chr15 6653213 6653590 -96841384 + Charlie7 DNA MER1_type 402 810 -1802 2 635 281 383 15 41 chr15 6653781 6653977 -96840997 + Charlie7 DNA MER1_type 1073 1263 -1349 2 635 295 338 55 29 chr15 6654278 6654516 -96840458 + Charlie7 DNA MER1_type 1845 2088 -524 2 635 22 56 0 0 chr15 6655178 6655214 -96839760 + AT_rich Low_complexity Low_complexity 1 36 0 2 635 209 148 0 115 chr15 6657184 6657245 -96837729 + T-rich Low_complexity Low_complexity 1 54 0 2 635 183 129 0 0 chr15 6657966 6657997 -96836977 + (TAA)n Simple_repeat Simple_repeat 1 31 0 2 635 207 194 44 15 chr15 6658283 6658351 -96836623 + G-rich Low_complexity Low_complexity 3 72 0 2 635 243 226 23 23 chr15 6658685 6658771 -96836203 + (CGGG)n Simple_repeat Simple_repeat 4 89 0 2 635 614 247 201 20 chr15 6661286 6661530 -96833444 - B4 SINE B4 -4 288 1 2 635 287 233 119 2 chr15 6661627 6661723 -96833251 + PB1D7 SINE Alu 9 113 -7 2 635 1200 54 0 0 chr15 6666895 6667042 -96827932 - B1_Mus2 SINE Alu 0 147 1 2 635 291 280 53 0 chr15 6668417 6668492 -96826482 - ID4_ SINE ID -2 81 3 2 635 756 281 15 5 chr15 6668689 6668893 -96826081 + B3 SINE B2 1 206 -10 2 635 288 0 0 0 chr15 6668995 6669027 -96825947 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 635 1573 148 207 3 chr15 6669855 6670174 -96824800 + ORR1C2 LTR MaLR 1 384 0 2 635 799 196 14 14 chr15 6670283 6670423 -96824551 - B1_Mus2 SINE Alu 0 147 8 2 635 297 0 0 0 chr15 6670767 6670800 -96824174 + (TC)n Simple_repeat Simple_repeat 2 34 0 2 635 225 0 0 0 chr15 6670800 6670824 -96824150 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 635 372 240 96 0 chr15 6670841 6670945 -96824029 - PB1D9 SINE Alu -6 114 1 2 635 205 325 24 12 chr15 6670972 6671056 -96823918 + CT-rich Low_complexity Low_complexity 4 88 0 2 635 256 324 14 0 chr15 6671056 6671127 -96823847 - ID4 SINE ID 0 83 12 2 635 317 308 114 8 chr15 6671168 6671299 -96823675 + L2a LINE L2 3276 3420 -6 2 635 184 353 73 40 chr15 6671814 6671938 -96823036 - L2a LINE L2 -10 3416 3289 2 635 237 65 0 0 chr15 6672533 6672564 -96822410 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 2 635 208 121 0 0 chr15 6672787 6672820 -96822154 + (GGCTG)n Simple_repeat Simple_repeat 1 33 0 2 635 21 0 0 0 chr15 6673354 6673375 -96821599 + AT_rich Low_complexity Low_complexity 1 21 0 2 635 876 148 31 25 chr15 6673438 6673598 -96821376 + B2_Mm2 SINE B2 1 161 -34 2 635 411 171 0 0 chr15 6673598 6673674 -96821300 + (TA)n Simple_repeat Simple_repeat 1 76 0 2 635 1318 235 98 15 chr15 6673824 6674161 -96820813 - ORR1D2 LTR MaLR -5 365 1 2 635 1215 27 7 0 chr15 6675349 6675495 -96819479 + B1_Mus2 SINE Alu 1 147 0 2 635 567 222 79 14 chr15 6676222 6676361 -96818613 - ID_B1 SINE B4 -3 221 78 2 635 436 247 186 41 chr15 6676583 6676777 -96818197 - B4A SINE B4 -15 277 56 2 635 25 0 0 0 chr15 6677023 6677048 -96817926 + AT_rich Low_complexity Low_complexity 1 25 0 2 635 252 0 0 0 chr15 6677109 6677137 -96817837 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 635 206 244 0 0 chr15 6677223 6677268 -96817706 + T-rich Low_complexity Low_complexity 4 48 0 2 635 344 277 71 9 chr15 6677659 6677772 -96817202 - B1F SINE Alu -1 148 29 2 635 217 258 0 29 chr15 6677966 6678034 -96816940 + CT-rich Low_complexity Low_complexity 3 68 0 2 635 250 212 0 29 chr15 6679403 6679471 -96815503 + (TTTG)n Simple_repeat Simple_repeat 2 67 0 2 635 1777 167 144 0 chr15 6679832 6680180 -96814794 - MTD LTR MaLR -20 399 2 2 635 226 265 41 0 chr15 6680514 6680612 -96814362 - L1M5 LINE L1 -610 5554 5453 2 635 280 312 10 41 chr15 6680634 6680731 -96814243 - MLT2B5 LTR ERVL -404 197 104 2 635 207 0 0 0 chr15 6681011 6681034 -96813940 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 635 2650 82 5 0 chr15 6681109 6681501 -96813473 + MusHAL1 LINE L1 1692 2085 -627 2 635 252 0 0 0 chr15 6681822 6681850 -96813124 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 635 279 0 0 0 chr15 6681850 6681880 -96813094 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 635 339 284 55 9 chr15 6682224 6682334 -96812640 + PB1D10 SINE Alu 1 115 -2 3 635 225 293 40 0 chr15 6682337 6682412 -96812562 + PB1D7 SINE Alu 43 120 0 3 635 237 269 154 0 chr15 6682497 6682575 -96812399 - PB1D7 SINE Alu -21 99 10 3 635 241 291 113 66 chr15 6682507 6682658 -96812316 - MT2B LTR ERVL -357 244 87 3 635 626 268 164 29 chr15 6682637 6682948 -96812026 + MLT1A0 LTR MaLR 13 365 0 3 635 298 292 44 60 chr15 6682948 6683092 -96811882 + MER58A DNA MER1_type 76 222 -2 3 635 248 208 26 53 chr15 6684496 6684572 -96810402 - L1MEc LINE L1 -4962 1438 1365 3 79 473 353 68 63 chr15 6684656 6685085 -96809889 - L1MEc LINE L1 -5907 493 63 3 636 306 278 160 15 chr15 6685568 6685692 -96809282 - PB1 SINE Alu -19 130 1 3 636 247 304 32 21 chr15 6686256 6686350 -96808624 - MER33 DNA MER1_type -227 97 3 3 636 366 329 66 0 chr15 6686870 6687007 -96807967 - Tigger15a DNA TcMar -471 244 99 3 636 23 0 0 0 chr15 6688283 6688306 -96806668 + AT_rich Low_complexity Low_complexity 1 23 0 3 636 251 286 32 147 chr15 6688787 6688863 -96806111 + B1F1 SINE Alu 1 78 -71 3 636 491 196 59 100 chr15 6688863 6689033 -96805941 + RSINE1 SINE B4 3 165 0 3 636 251 286 32 147 chr15 6689033 6689112 -96805862 + B1F1 SINE Alu 79 138 -11 3 636 1110 161 189 101 chr15 6689209 6689547 -96805427 - ORR1D2 LTR MaLR -2 368 1 3 636 897 244 20 10 chr15 6689547 6689749 -96805225 + B3 SINE B2 12 215 -1 3 636 27 0 0 0 chr15 6689858 6689885 -96805089 + AT_rich Low_complexity Low_complexity 1 27 0 3 636 629 235 89 18 chr15 6689908 6690077 -96804897 + B3A SINE B2 2 182 -16 3 636 29 28 0 0 chr15 6690089 6690125 -96804849 + AT_rich Low_complexity Low_complexity 1 36 0 3 636 820 220 40 5 chr15 6690583 6690784 -96804190 - B3 SINE B2 -7 209 2 3 636 1354 193 115 37 chr15 6690806 6691215 -96803759 - Lx9 LINE L1 -227 7417 6977 3 636 773 269 168 14 chr15 6691572 6691858 -96803116 + MLT1B LTR MaLR 10 339 -51 3 636 345 243 64 27 chr15 6691950 6692060 -96802914 - PB1D7 SINE Alu 0 120 7 3 636 592 180 166 7 chr15 6693109 6693260 -96801714 - URR1A DNA MER1_type 0 226 52 3 636 584 306 156 40 chr15 6693270 6693746 -96801228 + L1MEg LINE L1 908 1438 -4646 3 636 180 0 0 0 chr15 6694678 6694698 -96800276 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 636 853 126 128 25 chr15 6696164 6696360 -96798614 - Lx3B LINE L1 -5 6968 6753 3 636 2931 66 29 5 chr15 6696458 6696869 -96798105 - BGLII LTR ERVK 0 421 1 3 636 282 259 59 19 chr15 6696914 6697017 -96797957 - PB1D10 SINE Alu -1 116 10 3 636 238 200 0 0 chr15 6697803 6697843 -96797131 - ID_B1 SINE B4 -7 217 178 3 636 220 200 71 18 chr15 6697843 6697854 -96797120 - PB1 SINE Alu -2 120 67 3 636 982 207 34 15 chr15 6698198 6698404 -96796570 - B3 SINE B2 -6 210 1 3 636 1172 70 44 98 chr15 6699018 6699223 -96795751 - B2_Mm2 SINE B2 0 195 2 3 636 264 91 0 0 chr15 6699771 6699815 -96795159 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 636 180 77 0 0 chr15 6700002 6700028 -96794946 + (TTTTA)n Simple_repeat Simple_repeat 4 29 0 3 636 198 0 0 0 chr15 6700101 6700123 -96794851 + (TTG)n Simple_repeat Simple_repeat 2 23 0 3 636 681 162 60 23 chr15 6700123 6700256 -96794718 - B1_Mur2 SINE Alu -11 138 1 3 636 461 279 37 0 chr15 6701377 6701513 -96793461 - B1F SINE Alu -8 141 1 3 636 626 299 65 74 chr15 6701950 6702286 -96792688 - Charlie1b DNA MER1_type -155 368 36 3 636 434 309 27 0 chr15 6702450 6702560 -96792414 - PB1D7 SINE Alu -7 113 1 3 636 583 302 35 77 chr15 6703029 6703316 -96791658 - B4A SINE B4 -13 279 5 3 636 410 0 20 0 chr15 6703361 6703411 -96791563 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 636 577 261 0 29 chr15 6703411 6703549 -96791425 - RSINE1 SINE B4 -24 141 8 3 636 720 267 12 24 chr15 6703965 6704130 -96790844 + B4A SINE B4 127 289 -3 3 636 182 327 18 0 chr15 6704297 6704352 -96790622 - MIR SINE MIR -120 88 33 3 636 210 254 95 0 chr15 6704946 6705009 -96789965 - B3 SINE B2 -146 70 2 3 636 2585 71 175 3 chr15 6705175 6705558 -96789416 + Lx3_Mus LINE L1 6553 7001 -8 3 636 230 159 0 0 chr15 6707199 6707243 -96787731 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 3 636 21 82 0 0 chr15 6707689 6707738 -96787236 + AT_rich Low_complexity Low_complexity 1 49 0 3 636 228 265 48 58 chr15 6708631 6708735 -96786239 + PB1D10 SINE Alu 5 107 -10 3 636 220 282 54 86 chr15 6708883 6708894 -96786080 + B4A SINE B4 71 78 -214 3 636 301 281 104 0 chr15 6708894 6708990 -96785984 + B1F1 SINE Alu 2 107 -42 3 636 23 54 0 0 chr15 6709310 6709347 -96785627 + AT_rich Low_complexity Low_complexity 1 37 0 3 636 1109 181 24 5 chr15 6709705 6709916 -96785058 - B3 SINE B2 0 216 2 3 636 225 252 117 28 chr15 6710263 6710395 -96784579 + RSINE1 SINE B4 1 147 -145 3 636 290 317 36 12 chr15 6710403 6710486 -96784488 + RSINE1 SINE B4 76 160 -5 3 636 273 261 76 1 chr15 6710673 6710781 -96784193 + PB1D9 SINE Alu 1 116 -33 3 636 35 54 0 0 chr15 6711231 6711287 -96783687 + AT_rich Low_complexity Low_complexity 1 56 0 3 636 213 381 58 45 chr15 6711506 6711748 -96783226 + MIRb SINE MIR 3 247 -21 3 636 701 213 21 21 chr15 6712324 6712468 -96782506 + B1_Mur1 SINE Alu 6 149 0 3 636 561 254 24 68 chr15 6712487 6712694 -96782280 + B3A SINE B2 1 198 0 3 636 225 244 74 59 chr15 6712845 6712980 -96781994 + L1MEg1 LINE L1 619 755 -5480 3 636 454 302 155 10 chr15 6712980 6713187 -96781787 + B4 SINE B4 2 238 -54 3 636 183 42 0 0 chr15 6713304 6713328 -96781646 + (TTAGGG)n Simple_repeat Simple_repeat 5 28 0 3 636 621 221 110 0 chr15 6713328 6713482 -96781492 - L1_Mur2 LINE L1 -1978 3899 3729 3 636 466 284 66 22 chr15 6714710 6714847 -96780127 - B1_Mur1 SINE Alu -1 148 6 3 636 27 0 0 0 chr15 6715417 6715444 -96779530 + AT_rich Low_complexity Low_complexity 1 27 0 3 636 234 328 0 0 chr15 6715561 6715619 -96779355 - ID4_ SINE ID -21 62 5 3 636 255 222 15 31 chr15 6717133 6717198 -96777776 + MER46C DNA MER2_type 264 327 -11 3 636 27 62 0 0 chr15 6718662 6718710 -96776264 + AT_rich Low_complexity Low_complexity 1 48 0 3 636 345 234 96 59 chr15 6720692 6720828 -96774146 + B1F2 SINE Alu 2 142 -7 3 636 1172 68 0 7 chr15 6721431 6721579 -96773395 - B1_Mm SINE Alu 0 147 1 3 636 521 275 38 57 chr15 6721658 6721816 -96773158 - RSINE1 SINE B4 0 165 11 3 636 1212 41 0 0 chr15 6721856 6722003 -96772971 + B1_Mus1 SINE Alu 2 148 0 3 636 607 276 77 91 chr15 6724140 6724427 -96770547 - B4 SINE B4 0 292 10 3 636 470 252 42 21 chr15 6725742 6725884 -96769090 - B1F1 SINE Alu -1 148 4 3 636 218 319 0 0 chr15 6726240 6726309 -96768665 + CT-rich Low_complexity Low_complexity 4 72 0 3 636 263 289 109 36 chr15 6726312 6726457 -96768517 - B1_Mur2 SINE Alu 0 147 4 3 636 230 285 100 21 chr15 6727128 6727268 -96767706 + L1MA9 LINE L1 6162 6312 0 3 636 429 324 68 0 chr15 6727578 6727726 -96767248 + U1 snRNA snRNA 2 159 -6 3 636 513 252 57 13 chr15 6729600 6729757 -96765217 - B3 SINE B2 -51 165 2 3 636 204 135 0 0 chr15 6730541 6730578 -96764396 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 636 306 125 0 0 chr15 6730750 6730798 -96764176 + (CGTG)n Simple_repeat Simple_repeat 4 51 0 3 636 497 260 22 59 chr15 6730811 6730946 -96764028 - RSINE1 SINE B4 -32 133 4 3 636 33 56 0 0 chr15 6731098 6731152 -96763822 + AT_rich Low_complexity Low_complexity 1 54 0 3 636 423 317 56 21 chr15 6732469 6732611 -96762363 + RSINE1 SINE B4 11 157 -8 3 636 270 306 129 0 chr15 6732645 6732769 -96762205 - MIR SINE MIR -27 235 96 3 636 339 282 12 0 chr15 6734316 6734401 -96760573 - ID_B1 SINE B4 -38 186 101 3 636 254 369 36 9 chr15 6734401 6734419 -96760555 - B1F2 SINE Alu -32 84 3 3 636 745 163 7 90 chr15 6734822 6734977 -96759997 + B1_Mur3 SINE Alu 5 146 -3 3 636 238 356 104 0 chr15 6735163 6735278 -96759696 + B1F1 SINE Alu 15 141 -8 3 636 376 301 125 20 chr15 6735815 6736015 -96758959 - MER2 DNA MER2_type -121 224 4 3 636 198 0 0 0 chr15 6739645 6739667 -96755307 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3 636 275 265 162 61 chr15 6740106 6740303 -96754671 - B4A SINE B4 -75 217 1 3 636 23 0 0 0 chr15 6740774 6740797 -96754177 + AT_rich Low_complexity Low_complexity 1 23 0 3 636 1161 155 26 52 chr15 6740798 6741030 -96753944 - Lx4A LINE L1 -2 7056 6831 3 636 414 263 0 113 chr15 6742584 6742717 -96752257 + PB1D9 SINE Alu 2 119 -1 3 636 415 285 172 24 chr15 6742915 6743246 -96751728 + L1M2 LINE L1 4714 5093 -1050 3 636 22 35 0 0 chr15 6743284 6743313 -96751661 + AT_rich Low_complexity Low_complexity 1 29 0 3 636 374 321 25 6 chr15 6743343 6743503 -96751471 - RSINE1 SINE B4 0 165 3 3 636 189 0 0 0 chr15 6744916 6744937 -96750037 + (A)n Simple_repeat Simple_repeat 1 21 0 3 636 1136 55 14 7 chr15 6744960 6745107 -96749867 - B1_Mus1 SINE Alu 0 148 1 3 636 240 284 15 0 chr15 6745603 6745670 -96749304 + ID_B1 SINE B4 81 148 -76 4 636 228 122 0 0 chr15 6745709 6745750 -96749224 + (ACTG)n Simple_repeat Simple_repeat 1 41 0 4 636 23 0 0 0 chr15 6746117 6746140 -96748834 + AT_rich Low_complexity Low_complexity 1 23 0 4 636 315 0 0 0 chr15 6748286 6748321 -96746653 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 636 790 192 157 16 chr15 6751026 6751211 -96743763 + B3 SINE B2 4 214 -2 4 636 3436 39 53 0 chr15 6751362 6751776 -96743198 - RLTR10C LTR ERVK 0 436 1 4 636 29927 36 9 19 chr15 6751776 6755354 -96739620 - MMERVK10C-int LTR ERVK 0 7581 4038 4 636 2509 114 40 0 chr15 6755354 6755749 -96739225 - IAPLTR2a LTR ERVK 0 411 1 4 636 6224 35 12 12 chr15 6755751 6756495 -96738479 - IAPEz-int LTR ERVK -2 6479 5736 4 636 2233 75 0 0 chr15 6756494 6756772 -96738202 - IAPEz-int LTR ERVK -4845 1636 1359 4 636 3666 68 4 31 chr15 6756772 6757523 -96737451 - IAPEz-int LTR ERVK -5819 662 9 4 636 2494 117 40 0 chr15 6757524 6757919 -96737055 - IAPLTR2a LTR ERVK 0 411 1 4 636 12500 48 3 3 chr15 6757919 6759411 -96735563 - MMERVK10C-int LTR ERVK -3538 4043 2552 4 636 369 117 6 62 chr15 6759419 6759539 -96735435 - MMERVK10C-int LTR ERVK -5642 1939 1721 4 636 880 195 220 33 chr15 6759523 6759911 -96735063 - MMERVK10C-int LTR ERVK -4795 611 312 4 636 475 111 0 53 chr15 6759999 6760094 -96734880 - MMERVK10C-int LTR ERVK -6629 952 863 4 636 822 189 5 10 chr15 6760106 6760298 -96734676 - MMERVK10C-int LTR ERVK -6662 919 729 4 636 1497 74 7 3 chr15 6760296 6760559 -96734415 - MMERVK10C-int LTR ERVK -7238 343 1 4 636 3122 55 33 0 chr15 6760559 6760981 -96733993 - RLTR10C LTR ERVK 0 436 1 4 636 1555 276 144 21 chr15 6761322 6761984 -96732990 - L1M2 LINE L1 -944 5199 4493 4 636 3032 153 143 10 chr15 6761984 6762593 -96732381 - RMER6C LTR ERVK 0 690 1 4 636 1555 276 144 21 chr15 6762593 6762803 -96732171 - L1M2 LINE L1 -1651 4492 4219 4 636 726 269 110 33 chr15 6762945 6763280 -96731694 + L1MA4 LINE L1 5536 5896 -404 4 636 184 131 21 21 chr15 6763466 6763513 -96731461 + T-rich Low_complexity Low_complexity 2 48 0 4 636 477 253 204 21 chr15 6764069 6764348 -96730626 - MER2 DNA MER2_type -1 344 15 4 636 278 200 0 114 chr15 6766198 6766277 -96728697 - ID4 SINE ID -11 72 3 4 636 261 0 0 0 chr15 6766387 6766416 -96728558 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 636 308 217 293 9 chr15 6766416 6766532 -96728442 - B1F SINE Alu 0 149 1 4 636 273 302 11 34 chr15 6767286 6767375 -96727599 + PB1D10 SINE Alu 3 89 -28 4 636 1474 134 27 64 chr15 6767521 6767817 -96727157 + ORR1B1 LTR MaLR 101 385 -9 4 636 430 305 139 6 chr15 6768178 6768343 -96726631 + RMER30 DNA MER1_type 7 193 -9 4 636 1129 7 14 0 chr15 6768612 6768750 -96726224 + (CA)n Simple_repeat Simple_repeat 2 141 0 4 636 252 0 0 0 chr15 6769222 6769250 -96725724 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 636 396 0 0 0 chr15 6769250 6769293 -96725681 + (GA)n Simple_repeat Simple_repeat 1 44 0 4 636 316 212 55 13 chr15 6769308 6769391 -96725583 - L1ME3A LINE L1 -38 6124 6038 4 636 340 277 25 84 chr15 6769535 6769950 -96725024 - L1ME3A LINE L1 -403 5837 5463 4 636 260 315 62 16 chr15 6770166 6770295 -96724679 - Tigger5 DNA MER2_type -2266 140 6 4 636 448 283 183 0 chr15 6771148 6771328 -96723646 + ID_B1 SINE B4 12 224 0 4 636 351 0 0 0 chr15 6771793 6771832 -96723142 + (T)n Simple_repeat Simple_repeat 1 39 0 4 636 813 21 0 0 chr15 6772661 6772756 -96722218 + (TC)n Simple_repeat Simple_repeat 1 95 0 4 636 336 143 0 0 chr15 6772756 6772812 -96722162 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 636 1187 55 7 0 chr15 6773267 6773413 -96721561 + B1_Mus2 SINE Alu 1 147 0 4 636 276 320 21 0 chr15 6774759 6774856 -96720118 + ORR1E LTR MaLR 3 101 -258 4 636 439 229 10 0 chr15 6776652 6776748 -96718226 - PB1D10 SINE Alu -20 97 1 4 636 327 104 0 0 chr15 6777415 6777463 -96717511 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 636 542 356 105 68 chr15 6777869 6778412 -96716562 + MER115 DNA Tip100 131 693 0 4 636 9399 65 2 4 chr15 6778771 6780656 -96714318 - L1Md_F2 LINE L1 -4 6578 4697 4 636 1146 98 159 40 chr15 6780671 6780872 -96714102 - URR1A DNA MER1_type -1 225 1 4 636 432 0 0 0 chr15 6781171 6781219 -96713755 + (TTTTA)n Simple_repeat Simple_repeat 4 51 0 4 636 294 130 0 0 chr15 6781441 6781495 -96713479 + L1Md_F2 LINE L1 6520 6573 -9 4 636 294 87 0 0 chr15 6781867 6781913 -96713061 + (A)n Simple_repeat Simple_repeat 1 46 0 4 636 382 298 23 127 chr15 6782138 6782311 -96712663 - RSINE1 SINE B4 0 165 11 4 636 19828 66 21 3 chr15 6783504 6786795 -96708179 + L1VL4 LINE L1 206 3559 0 4 636 492 273 72 0 chr15 6787342 6787481 -96707493 - B1F2 SINE Alu 0 149 1 4 636 309 309 12 0 chr15 6787512 6787593 -96707381 - ID_B1 SINE B4 -51 173 92 4 636 180 0 0 0 chr15 6787600 6787620 -96707354 + (A)n Simple_repeat Simple_repeat 1 20 0 4 636 201 167 0 0 chr15 6787836 6787872 -96707102 + A-rich Low_complexity Low_complexity 1 36 0 4 636 297 279 0 0 chr15 6788071 6788157 -96706817 + L1MEf LINE L1 78 163 -6037 4 636 536 261 82 39 chr15 6788186 6788441 -96706533 + L1MEf LINE L1 607 872 -5328 4 636 1639 288 76 11 chr15 6788529 6789081 -96705893 + Lx8 LINE L1 6120 6707 -766 4 636 635 322 0 40 chr15 6789604 6789827 -96705147 + MER70-int LTR ERVL 1768 1981 -3042 4 636 475 358 5 5 chr15 6789988 6790176 -96704798 + MER70-int LTR ERVL 2051 2238 -2785 4 636 533 290 60 30 chr15 6790279 6790446 -96704528 + MER70-int LTR ERVL 2379 2550 -2473 4 636 25 0 0 0 chr15 6791046 6791071 -96703903 + AT_rich Low_complexity Low_complexity 1 25 0 4 636 1579 161 22 57 chr15 6791312 6791773 -96703201 + RMER17C LTR ERVK 16 439 -519 4 636 749 172 299 0 chr15 6794033 6794207 -96700767 + URR1A DNA MER1_type 1 226 0 4 636 982 250 59 68 chr15 6794919 6795241 -96699733 + MTE2b LTR MaLR 16 334 -45 4 636 498 136 21 7 chr15 6796573 6796714 -96698260 + (TCTA)n Simple_repeat Simple_repeat 4 146 0 4 636 1487 186 113 3 chr15 6798392 6798711 -96696263 + MTC LTR MaLR 1 354 -67 4 636 202 176 68 0 chr15 6798711 6798785 -96696189 + A-rich Low_complexity Low_complexity 5 83 0 4 636 395 198 0 7 chr15 6798790 6798874 -96696100 + MTD LTR MaLR 282 419 0 4 636 360 276 11 0 chr15 6801583 6801670 -96693304 - ID_B1 SINE B4 -19 205 118 4 636 1078 177 108 5 chr15 6802074 6802278 -96692696 + URR1B DNA MER1_type 1 225 0 4 636 25 65 0 0 chr15 6802888 6802934 -96692040 + AT_rich Low_complexity Low_complexity 1 46 0 4 636 231 36 0 0 chr15 6803128 6803156 -96691818 + (A)n Simple_repeat Simple_repeat 1 28 0 4 636 1466 282 64 71 chr15 6804421 6805386 -96689588 + L1MB5 LINE L1 5067 6026 -148 4 636 2102 270 82 37 chr15 6806074 6806910 -96688064 + Lx9 LINE L1 6767 7640 -4 4 636 424 126 23 0 chr15 6806952 6807039 -96687935 + (GA)n Simple_repeat Simple_repeat 1 89 0 4 636 872 241 155 7 chr15 6807121 6807418 -96687556 + MTEb LTR MaLR 20 360 -19 4 636 242 248 156 57 chr15 6807831 6807972 -96687002 - MIR3 SINE MIR -32 176 22 4 636 414 0 0 0 chr15 6808255 6808301 -96686673 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 636 528 318 0 13 chr15 6808363 6808516 -96686458 + RSINE1 SINE B4 9 159 -6 4 636 336 24 0 0 chr15 6808602 6808643 -96686331 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 636 787 254 16 0 chr15 6810901 6811086 -96683888 + B3 SINE B2 2 189 -27 4 636 36 40 0 0 chr15 6811107 6811157 -96683817 + AT_rich Low_complexity Low_complexity 1 50 0 4 636 306 164 0 52 chr15 6812461 6812519 -96682455 - HAL1-3A_ME LINE L1 -830 2028 1974 4 636 575 198 20 14 chr15 6812521 6812871 -96682103 + (TATG)n Simple_repeat Simple_repeat 1 351 0 4 636 263 269 195 85 chr15 6812876 6812994 -96681980 - RSINE1 SINE B4 0 165 35 4 636 358 297 42 0 chr15 6815098 6815216 -96679758 + L1M2 LINE L1 2702 2824 -3319 4 637 192 91 49 49 chr15 6816047 6816128 -96678846 + T-rich Low_complexity Low_complexity 5 85 0 4 637 615 231 0 8 chr15 6816420 6816551 -96678423 + B1F2 SINE Alu 12 141 -8 4 637 489 58 0 0 chr15 6817321 6817390 -96677584 + (TTTC)n Simple_repeat Simple_repeat 1 69 0 4 637 936 269 6 73 chr15 6817988 6818301 -96676673 - B4 SINE B4 0 292 1 4 637 199 313 58 44 chr15 6818797 6818934 -96676040 - MIR SINE MIR -77 185 47 4 637 25 65 0 0 chr15 6819149 6819195 -96675779 + AT_rich Low_complexity Low_complexity 1 46 0 4 637 247 211 0 0 chr15 6820033 6820085 -96674889 + L1MB2 LINE L1 6120 6171 0 4 637 271 303 0 0 chr15 6820233 6820309 -96674665 + RSINE1 SINE B4 68 143 -22 4 637 775 259 202 13 chr15 6821025 6821342 -96673632 + MTEa LTR MaLR 3 379 0 4 637 1083 103 0 0 chr15 6822642 6823287 -96671687 + (CA)n Simple_repeat Simple_repeat 1 645 0 4 637 378 0 0 0 chr15 6825320 6825362 -96669612 + (TTA)n Simple_repeat Simple_repeat 1 42 0 4 637 290 288 107 0 chr15 6825987 6826093 -96668881 - L1M1 LINE L1 -543 5754 5639 4 637 297 111 0 0 chr15 6826168 6826222 -96668752 - Lx LINE L1 0 6654 6601 4 637 409 191 106 0 chr15 6826227 6826321 -96668653 + PB1D9 SINE Alu 17 120 0 4 637 318 330 43 11 chr15 6826644 6826831 -96668143 + MLT1C LTR MaLR 269 461 -6 4 637 698 169 83 23 chr15 6827076 6827209 -96667765 - B1_Mus2 SINE Alu -2 145 5 4 637 306 0 0 0 chr15 6827377 6827411 -96667563 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 637 1442 68 16 21 chr15 6827509 6827703 -96667271 + B2_Mm2 SINE B2 1 193 -2 4 637 486 343 31 42 chr15 6828029 6828411 -96666563 - L1MEf LINE L1 -4829 1371 962 4 637 204 64 64 0 chr15 6828704 6828751 -96666223 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 4 637 476 294 55 11 chr15 6830254 6830436 -96664538 - B3A SINE B2 -8 190 1 4 637 1089 167 4 35 chr15 6830597 6830827 -96664147 + RLTR11A LTR ERVK 302 524 -4 4 637 628 141 15 0 chr15 6831837 6831972 -96663002 + (TG)n Simple_repeat Simple_repeat 1 137 0 4 637 367 294 51 32 chr15 6831972 6832130 -96662844 - RSINE1 SINE B4 0 165 5 4 637 3137 192 59 77 chr15 6832652 6833429 -96661545 - RMER1A Other Other 0 1030 268 4 637 414 138 0 0 chr15 6833433 6833491 -96661483 - RMER1A Other Other -892 138 81 4 637 582 300 93 0 chr15 6834252 6834499 -96660475 - MER31A LTR ERV1 -56 429 160 4 637 195 42 0 0 chr15 6834616 6834640 -96660334 + (TTTC)n Simple_repeat Simple_repeat 3 26 0 4 637 735 194 10 0 chr15 6834650 6834786 -96660188 - B1_Mus1 SINE Alu -9 139 2 5 637 763 258 173 8 chr15 6835247 6835501 -96659473 + MTE2b LTR MaLR 2 297 -82 5 637 2028 202 19 30 chr15 6835907 6836336 -96658638 - RMER1B Other Other 0 1066 643 5 637 1478 189 43 11 chr15 6836446 6836724 -96658250 - RMER1B Other Other -737 329 43 5 637 317 319 0 11 chr15 6837015 6837107 -96657867 - MER34A LTR ERV1 -8 563 473 5 637 1166 69 7 0 chr15 6837111 6837256 -96657718 + B1_Mus1 SINE Alu 2 147 -1 5 637 258 105 0 0 chr15 6837256 6837294 -96657680 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 5 637 688 249 92 21 chr15 6837430 6837668 -96657306 - MER34A LTR ERV1 -271 300 46 5 637 237 65 0 0 chr15 6837684 6837715 -96657259 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 637 253 209 14 82 chr15 6838017 6838090 -96656884 - L1MA4 LINE L1 -375 5925 5858 5 637 2641 211 124 53 chr15 6838440 6839380 -96655594 - RMER1B Other Other 0 1066 147 5 637 2311 89 38 0 chr15 6839733 6840046 -96654928 - ORR1A2 LTR MaLR -2 325 1 5 637 369 0 0 0 chr15 6840240 6840281 -96654693 + (TTA)n Simple_repeat Simple_repeat 1 41 0 5 637 779 261 62 29 chr15 6840289 6840390 -96654584 + ID_B1 SINE B4 2 99 -125 5 637 1988 192 95 10 chr15 6840390 6840648 -96654326 - RLTR11A2 LTR ERVK -2 525 261 5 637 537 16 0 0 chr15 6840648 6840710 -96654264 + (TC)n Simple_repeat Simple_repeat 1 62 0 5 637 1988 192 95 10 chr15 6840710 6840935 -96654039 - RLTR11A2 LTR ERVK -267 260 2 5 637 779 261 62 29 chr15 6840935 6841042 -96653932 + ID_B1 SINE B4 100 217 -7 5 637 665 251 154 59 chr15 6841775 6842249 -96652725 - L1M2 LINE L1 -2667 3476 2958 5 637 477 0 0 0 chr15 6842263 6842316 -96652658 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 5 637 443 325 79 38 chr15 6842334 6842599 -96652375 - B4A SINE B4 -3 289 14 5 637 39404 5 0 0 chr15 6842619 6848186 -96646788 + L1Md_A LINE L1 21 5586 -297 5 637 9195 3 0 0 chr15 6848186 6849182 -96645792 + L1Md_A LINE L1 5587 6582 0 5 637 298 314 134 20 chr15 6849193 6849440 -96645534 + L1MC4 LINE L1 7574 7848 -194 5 637 211 139 28 0 chr15 6850663 6850699 -96644275 + CT-rich Low_complexity Low_complexity 2 38 0 5 637 180 0 0 0 chr15 6852034 6852054 -96642920 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 637 233 270 142 96 chr15 6852215 6852412 -96642562 + L1MC LINE L1 5697 5902 -1980 5 637 7122 78 60 3 chr15 6852594 6853585 -96641389 + Lx3_Mus LINE L1 5963 7009 0 5 637 530 261 18 44 chr15 6853613 6853806 -96641168 + MLT2D LTR ERVL 56 241 -315 5 637 284 0 28 0 chr15 6854234 6854270 -96640704 + (TTA)n Simple_repeat Simple_repeat 2 38 0 5 637 227 158 0 26 chr15 6854579 6854618 -96640356 + HAL1 LINE L1 1644 1681 -826 5 637 970 176 118 32 chr15 6854639 6854966 -96640008 - RMER10A LTR ERVL 0 442 67 5 637 560 283 99 20 chr15 6856608 6856810 -96638164 + Lx8 LINE L1 6805 7022 -451 5 637 345 324 87 12 chr15 6857195 6857448 -96637526 - L1M5 LINE L1 -1294 4852 4581 5 637 578 298 101 19 chr15 6857902 6858111 -96636863 + B4 SINE B4 42 267 -25 5 637 423 0 0 0 chr15 6858122 6858169 -96636805 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 637 249 211 0 0 chr15 6859432 6859489 -96635485 + A-rich Low_complexity Low_complexity 5 61 0 5 637 401 156 0 13 chr15 6861413 6861491 -96633483 + (CA)n Simple_repeat Simple_repeat 2 78 0 5 637 582 54 0 0 chr15 6862015 6862089 -96632885 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 637 297 0 0 0 chr15 6862089 6862121 -96632853 + (GA)n Simple_repeat Simple_repeat 2 34 0 5 637 478 294 32 32 chr15 6863603 6863761 -96631213 - RSINE1 SINE B4 0 165 8 5 637 209 288 175 0 chr15 6864432 6864512 -96630462 + MIR SINE MIR 34 127 -81 5 637 3586 197 133 31 chr15 6864841 6866402 -96628572 + Lx6 LINE L1 343 2067 -3813 5 637 255 103 0 0 chr15 6866410 6866449 -96628525 + (CAG)n Simple_repeat Simple_repeat 3 41 0 5 637 2751 178 36 5 chr15 6866450 6867037 -96627937 + Lx6 LINE L1 2807 3411 -2469 5 637 698 81 0 29 chr15 6867034 6867136 -96627838 + L1_Mur3 LINE L1 5309 5407 -473 5 637 531 177 116 101 chr15 6867146 6867284 -96627690 + B1_Mur3 SINE Alu 10 149 0 5 637 3292 203 57 20 chr15 6867284 6868497 -96626477 + Lx6 LINE L1 5393 6887 -573 5 637 292 125 62 0 chr15 6868559 6868623 -96626351 + Lx6 LINE L1 7381 7448 -12 5 637 363 96 0 0 chr15 6868713 6868765 -96626209 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 5 637 198 91 0 0 chr15 6868777 6868810 -96626164 + (CAA)n Simple_repeat Simple_repeat 1 33 0 5 637 409 254 43 29 chr15 6870283 6870421 -96624553 + MLT1J LTR MaLR 101 240 -272 5 637 363 348 48 13 chr15 6871275 6871505 -96623469 + MIR SINE MIR 13 250 -12 5 637 267 288 49 98 chr15 6871716 6871839 -96623135 + PB1D10 SINE Alu 1 117 0 5 637 207 88 0 0 chr15 6871850 6871884 -96623090 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 5 637 953 160 65 27 chr15 6871890 6872076 -96622898 + Lx9 LINE L1 7284 7476 -168 5 637 186 292 15 0 chr15 6873707 6873772 -96621202 + L2a LINE L2 3326 3391 -35 5 637 1379 238 38 55 chr15 6873820 6873935 -96621039 - MTD LTR MaLR -20 399 277 5 637 2013 212 73 65 chr15 6873935 6874439 -96620535 + RLTR18B LTR ERVK 1 508 -4 5 637 1379 238 38 55 chr15 6874439 6874723 -96620251 - MTD LTR MaLR -143 276 7 5 637 807 66 0 0 chr15 6875189 6875295 -96619679 + (CA)n Simple_repeat Simple_repeat 1 106 0 5 637 195 254 85 0 chr15 6875328 6875387 -96619587 - L3 LINE CR1 -255 4234 4171 5 637 1659 202 34 41 chr15 6875433 6875820 -96619154 + ORR1C2 LTR MaLR 1 384 0 5 637 1268 221 105 7 chr15 6875901 6876236 -96618738 + ORR1D2 LTR MaLR 1 379 0 5 637 291 85 0 0 chr15 6876371 6876418 -96618556 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 5 637 524 214 0 18 chr15 6876418 6876524 -96618450 - PB1D10 SINE Alu -6 111 6 5 637 2352 216 20 97 chr15 6876565 6877227 -96617747 - RMER19C LTR ERVK 0 611 1 5 637 206 121 0 0 chr15 6878113 6878146 -96616828 + (A)n Simple_repeat Simple_repeat 1 33 0 5 637 299 242 115 16 chr15 6878506 6878628 -96616346 - L3 LINE CR1 -1082 3407 3274 5 637 450 0 0 0 chr15 6879083 6879133 -96615841 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 5 637 2110 90 3 56 chr15 6879285 6879625 -96615349 + ORR1A2 LTR MaLR 6 327 0 5 637 324 248 178 0 chr15 6879629 6879730 -96615244 - B4A SINE B4 -173 119 1 5 637 235 316 87 37 chr15 6881523 6881684 -96613290 - L1MC4 LINE L1 -598 7444 7276 5 637 304 172 0 17 chr15 6881694 6881753 -96613221 - B3 SINE B2 -6 210 153 5 637 918 200 11 58 chr15 6881795 6881986 -96612988 + B3 SINE B2 5 186 -30 5 637 2689 7 0 16 chr15 6882066 6882372 -96612602 - L1Md_T LINE L1 0 6582 6282 5 637 21 36 0 0 chr15 6882568 6882596 -96612378 + AT_rich Low_complexity Low_complexity 1 28 0 5 637 1346 164 0 22 chr15 6883450 6883680 -96611294 + URR1B DNA MER1_type 1 225 0 5 637 2100 119 28 9 chr15 6885215 6885538 -96609436 - ORR1A4 LTR MaLR 0 329 1 5 637 213 39 0 0 chr15 6885837 6885863 -96609111 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 5 637 8706 18 0 0 chr15 6886008 6887493 -96607481 - L1Md_T LINE L1 0 6582 5122 5 637 8552 22 0 0 chr15 6887494 6888473 -96606501 + L1Md_T LINE L1 4152 5130 -753 5 637 1431 288 29 13 chr15 6888560 6889007 -96605967 - Lx8 LINE L1 -148 7325 6872 5 637 453 36 0 0 chr15 6889115 6889170 -96605804 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 5 637 251 297 16 0 chr15 6889781 6889845 -96605129 - ID4_ SINE ID -11 72 8 5 637 687 295 123 36 chr15 6889881 6890596 -96604378 - L1MEf LINE L1 -4959 1519 739 5 637 258 292 41 16 chr15 6890972 6891094 -96603880 + L1MC LINE L1 5701 5825 -2057 5 637 215 53 69 35 chr15 6892022 6892080 -96602894 + T-rich Low_complexity Low_complexity 2 61 0 5 637 486 0 0 0 chr15 6892330 6892384 -96602590 + (TA)n Simple_repeat Simple_repeat 1 54 0 5 637 917 312 63 49 chr15 6892460 6892807 -96602167 + MTEa LTR MaLR 28 379 0 5 637 1064 289 141 18 chr15 6892807 6893255 -96601719 + MTEa-int LTR MaLR 1 503 -1077 5 637 645 270 11 28 chr15 6893343 6893522 -96601452 + B3A SINE B2 1 176 -22 5 637 2552 271 101 31 chr15 6893528 6893779 -96601195 + MTEa-int LTR MaLR 598 861 -719 5 637 189 0 0 0 chr15 6893779 6893800 -96601174 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 5 637 2552 271 101 31 chr15 6893800 6894421 -96600553 + MTEa-int LTR MaLR 862 1530 -50 5 637 3800 255 93 75 chr15 6894475 6895393 -96599581 - Lx5 LINE L1 -40 7010 6172 5 637 378 0 0 0 chr15 6895393 6895435 -96599539 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 637 3800 204 52 30 chr15 6895435 6896151 -96598823 - Lx5 LINE L1 -879 6171 5340 5 637 593 222 13 65 chr15 6896151 6896305 -96598669 + B1_Mus1 SINE Alu 1 146 -2 5 637 832 344 79 3 chr15 6896329 6896670 -96598304 + MTEa LTR MaLR 11 377 -2 5 637 188 337 59 0 chr15 6896762 6896863 -96598111 + MIRc SINE MIR 45 151 -117 5 637 231 191 0 0 chr15 6897994 6898036 -96596938 + 5S rRNA rRNA 1 42 -79 5 637 379 287 42 25 chr15 6898531 6898724 -96596250 - MLT1H LTR MaLR -346 203 5 5 637 1047 124 86 53 chr15 6900016 6900203 -96594771 + B2_Mm2 SINE B2 1 193 -2 5 637 460 280 25 0 chr15 6900612 6900730 -96594244 - B1F SINE Alu -25 124 4 5 637 247 337 12 0 chr15 6900800 6900883 -96594091 + MIRb SINE MIR 126 209 -59 5 637 22 0 0 0 chr15 6900898 6900920 -96594054 + AT_rich Low_complexity Low_complexity 1 22 0 5 637 879 166 0 32 chr15 6901629 6901785 -96593189 - RMER15 LTR ERVL -17 558 408 5 637 2007 135 57 42 chr15 6902513 6902899 -96592075 - RMER15 LTR ERVL -183 392 1 5 637 276 213 22 7 chr15 6903043 6903184 -96591790 + CT-rich Low_complexity Low_complexity 1 143 0 5 637 1174 68 7 0 chr15 6904993 6905140 -96589834 - B1_Mus1 SINE Alu 0 148 1 5 637 239 308 101 14 chr15 6905736 6905884 -96589090 - Charlie8 DNA MER1_type -2165 263 103 5 637 702 283 31 16 chr15 6905915 6905934 -96589040 - B3A SINE B2 -1 197 180 5 637 239 0 0 31 chr15 6905934 6905966 -96589008 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 637 702 283 31 16 chr15 6905966 6906140 -96588834 - B3A SINE B2 -19 179 1 5 637 617 272 82 5 chr15 6906254 6906450 -96588524 - ID_B1 SINE B4 -12 212 2 5 637 1824 176 10 48 chr15 6906491 6906909 -96588065 + RMER17C LTR ERVK 1 402 -8 5 637 622 301 70 44 chr15 6906971 6907315 -96587659 - MLT1A0 LTR MaLR 0 365 13 6 637 255 374 18 50 chr15 6907748 6907919 -96587055 + L2c LINE L2 2933 3095 -292 6 637 1171 68 7 0 chr15 6908078 6908225 -96586749 - B1_Mus1 SINE Alu 0 148 1 6 637 181 386 7 57 chr15 6908311 6908451 -96586523 + L2c LINE L2 3289 3421 -5 6 637 496 246 53 18 chr15 6908682 6908852 -96586122 + L1MD LINE L1 5538 5713 -2282 6 637 243 0 0 0 chr15 6909613 6909640 -96585334 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 637 579 315 47 56 chr15 6909641 6909856 -96585118 - B4 SINE B4 -79 213 1 6 637 423 0 0 0 chr15 6910471 6910518 -96584456 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 637 258 32 0 0 chr15 6912913 6912944 -96582030 + (CAGGC)n Simple_repeat Simple_repeat 2 32 0 6 637 374 285 95 0 chr15 6913735 6913845 -96581129 + MER33 DNA MER1_type 10 120 -204 6 637 180 0 0 0 chr15 6913845 6913865 -96581109 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 637 374 285 95 0 chr15 6913865 6913891 -96581083 + MER33 DNA MER1_type 121 158 -166 6 637 678 220 81 6 chr15 6914349 6914509 -96580465 + ID_B1 SINE B4 1 172 -52 6 637 181 369 102 39 chr15 6915438 6915565 -96579409 + MIRb SINE MIR 60 194 -74 6 637 264 336 57 96 chr15 6916908 6917138 -96577836 - B4A SINE B4 0 292 72 6 637 868 107 13 1 chr15 6917511 6917658 -96577316 + B2_Mm2 SINE B2 1 159 -57 6 637 210 71 0 0 chr15 6917668 6917696 -96577278 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 6 637 1252 277 92 48 chr15 6919289 6919760 -96575214 + L1MC4a LINE L1 6426 6892 -990 6 637 528 16 0 0 chr15 6919760 6919821 -96575153 + (GA)n Simple_repeat Simple_repeat 2 62 0 6 637 1252 277 92 48 chr15 6919821 6920134 -96574840 + L1MC4a LINE L1 6893 7244 -638 6 637 842 192 84 0 chr15 6920141 6920308 -96574666 + B3 SINE B2 6 186 -30 6 637 495 33 0 0 chr15 6920308 6920369 -96574605 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 637 238 196 0 0 chr15 6920369 6920425 -96574549 + GA-rich Low_complexity Low_complexity 1 56 0 6 637 455 161 8 0 chr15 6920426 6920544 -96574430 + (CAGA)n Simple_repeat Simple_repeat 4 122 0 6 637 453 304 122 19 chr15 6920587 6920906 -96574068 + L1MC4a LINE L1 7270 7621 -421 6 637 209 135 148 37 chr15 6921965 6922019 -96572955 - MER5B DNA MER1_type -30 148 89 6 637 317 221 0 14 chr15 6922228 6922297 -96572677 - B3 SINE B2 -147 69 2 6 637 186 43 0 0 chr15 6924405 6924428 -96570546 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 637 313 148 12 12 chr15 6924428 6924510 -96570464 + GA-rich Low_complexity Low_complexity 1 82 0 6 637 984 168 117 15 chr15 6925562 6925767 -96569207 + URR1A DNA MER1_type 1 226 0 6 637 458 264 0 0 chr15 6926643 6926817 -96568157 + (CATA)n Simple_repeat Simple_repeat 1 174 0 6 637 464 267 0 0 chr15 6926759 6926939 -96568035 + (CAGC)n Simple_repeat Simple_repeat 1 180 0 6 637 1657 161 47 108 chr15 6927460 6927677 -96567297 + RMER10B LTR ERVL 1 225 -173 6 637 423 0 0 0 chr15 6927677 6927724 -96567250 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 637 1657 161 47 108 chr15 6927724 6927930 -96567044 + RMER10B LTR ERVL 226 398 0 6 637 1895 145 152 11 chr15 6928115 6928484 -96566490 - MTC LTR MaLR 0 421 1 6 637 31 76 0 0 chr15 6930169 6930235 -96564739 + AT_rich Low_complexity Low_complexity 1 66 0 6 637 299 254 16 78 chr15 6930392 6930520 -96564454 + Charlie2b DNA MER1_type 2624 2743 -39 6 637 1022 147 97 4 chr15 6932069 6932295 -96562679 + RMER10B LTR ERVL 19 265 -133 6 637 861 168 5 73 chr15 6932343 6932562 -96562412 + RMER10B LTR ERVL 195 398 0 6 637 343 364 31 6 chr15 6932679 6932842 -96562132 - Tigger7 DNA MER2_type -7 2484 2318 6 637 208 306 97 0 chr15 6933761 6933833 -96561141 - MIR3 SINE MIR -53 155 77 6 637 194 91 30 0 chr15 6934140 6934173 -96560801 + (TCTCCC)n Simple_repeat Simple_repeat 2 35 0 6 637 231 258 22 47 chr15 6934883 6934982 -96559992 - MIR SINE MIR 0 262 170 6 637 552 15 0 0 chr15 6935197 6935262 -96559712 + (TC)n Simple_repeat Simple_repeat 2 66 0 6 637 2251 164 23 10 chr15 6935424 6935619 -96559355 - RMER10B LTR ERVL 0 398 198 6 637 1007 92 0 13 chr15 6935619 6935773 -96559201 + (GGGGA)n Simple_repeat Simple_repeat 5 156 0 6 637 2251 164 23 10 chr15 6935773 6935970 -96559004 - RMER10B LTR ERVL -201 197 2 6 637 22 0 0 0 chr15 6935974 6935996 -96558978 + AT_rich Low_complexity Low_complexity 1 22 0 6 637 708 268 34 188 chr15 6936158 6936604 -96558370 + MTEa LTR MaLR 1 377 -2 6 637 1008 178 87 0 chr15 6936771 6936979 -96557995 + URR1A DNA MER1_type 1 226 0 6 637 4319 109 30 24 chr15 6937275 6937951 -96557023 + Lx LINE L1 5956 6635 -19 6 637 203 0 37 0 chr15 6937951 6937978 -96556996 + (TAA)n Simple_repeat Simple_repeat 3 30 0 6 637 507 207 0 0 chr15 6939465 6939615 -96555359 + (TG)n Simple_repeat Simple_repeat 2 151 0 6 637 932 117 0 11 chr15 6939626 6939808 -96555166 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 637 376 291 119 17 chr15 6939857 6940151 -96554823 + MLT1A0 LTR MaLR 42 365 0 6 637 423 324 58 126 chr15 6941587 6942000 -96552974 - MamRep1161 DNA TcMar -345 612 228 6 637 365 297 0 18 chr15 6942262 6942375 -96552599 + PB1D10 SINE Alu 1 111 -6 6 637 293 373 60 0 chr15 6942523 6942657 -96552317 - MER91A DNA Tip100 -54 142 1 6 637 212 267 18 54 chr15 6942830 6942941 -96552033 + GA-rich Low_complexity Low_complexity 5 111 0 6 637 308 43 0 21 chr15 6943045 6943092 -96551882 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 637 552 30 0 0 chr15 6943092 6943157 -96551817 + (GA)n Simple_repeat Simple_repeat 1 66 0 6 637 649 215 30 0 chr15 6944035 6944170 -96550804 + ID_B1 SINE B4 80 218 -6 6 637 387 287 66 0 chr15 6944948 6945084 -96549890 + B1F1 SINE Alu 5 149 0 6 637 418 245 42 28 chr15 6946323 6946466 -96548508 + MER102a DNA MER1_type 60 204 -126 6 637 252 333 0 0 chr15 6946621 6946693 -96548281 + CT-rich Low_complexity Low_complexity 1 72 0 6 638 236 304 119 64 chr15 6947001 6947219 -96547755 - L1ME3A LINE L1 -49 6124 5895 6 638 444 258 98 73 chr15 6947237 6947442 -96547532 - B3 SINE B2 -5 211 2 6 638 986 296 88 20 chr15 6947483 6947925 -96547049 - Lx8 LINE L1 0 7473 7002 6 638 342 318 21 90 chr15 6948190 6948335 -96546639 - LTR16E2 LTR ERVL -187 381 247 6 638 228 288 0 14 chr15 6948479 6948553 -96546421 - L1ME3A LINE L1 -461 5701 5629 6 638 555 288 111 4 chr15 6952792 6953026 -96541948 - B4 SINE B4 -32 260 2 6 638 247 211 39 0 chr15 6953899 6953951 -96541023 + MIR3 SINE MIR 114 167 -41 6 638 255 350 36 14 chr15 6956200 6956339 -96538635 - MIR SINE MIR -81 181 40 6 638 294 54 0 0 chr15 6956579 6956616 -96538358 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 638 884 169 11 0 chr15 6956617 6956794 -96538180 + (CATATA)n Simple_repeat Simple_repeat 1 179 0 6 638 240 222 0 0 chr15 6957395 6957449 -96537525 + CT-rich Low_complexity Low_complexity 1 54 0 6 638 218 32 32 0 chr15 6957566 6957597 -96537377 + (CAAT)n Simple_repeat Simple_repeat 1 32 0 6 638 1162 34 7 40 chr15 6958086 6958238 -96536736 + B1_Mus1 SINE Alu 2 148 0 6 638 2379 95 6 0 chr15 6960690 6961015 -96533959 + ORR1A2 LTR MaLR 1 327 0 6 638 182 169 15 44 chr15 6962854 6962922 -96532052 + GA-rich Low_complexity Low_complexity 6 71 0 6 638 212 321 107 0 chr15 6963168 6963280 -96531694 + MIR SINE MIR 80 203 -59 6 638 206 330 57 0 chr15 6964341 6964429 -96530545 - MIRc SINE MIR -114 154 62 6 638 246 321 233 6 chr15 6964670 6964833 -96530141 + RMER15 LTR ERVL 362 561 -14 6 638 455 275 80 55 chr15 6965646 6965935 -96529039 - RLTR15 LTR ERVK -16 343 48 6 638 846 29 0 0 chr15 6966869 6966886 -96528088 + (GAA)n Simple_repeat Simple_repeat 3 19 0 6 638 1437 40 0 0 chr15 6966886 6967062 -96527912 + (GGGAGA)n Simple_repeat Simple_repeat 5 180 0 6 638 846 29 0 0 chr15 6967062 6967147 -96527827 + (GAA)n Simple_repeat Simple_repeat 2 86 0 6 638 199 234 77 13 chr15 6967393 6967471 -96527503 - L2 LINE L2 -1052 2367 2285 6 638 872 228 9 50 chr15 6968202 6968424 -96526550 - ID_B1 SINE B4 -10 214 2 6 638 478 275 15 8 chr15 6969256 6969388 -96525586 + MT2A LTR ERVL 1 133 -400 6 638 369 0 0 0 chr15 6969408 6969449 -96525525 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 638 243 61 0 0 chr15 6969450 6969483 -96525491 + (CCA)n Simple_repeat Simple_repeat 1 33 0 6 638 869 110 136 0 chr15 6969990 6970145 -96524829 + B2_Mm2 SINE B2 12 187 -8 6 638 544 250 192 60 chr15 6970450 6970731 -96524243 + Lx8 LINE L1 7150 7467 -6 6 638 3006 63 15 12 chr15 6971773 6972172 -96522802 - MTB LTR MaLR 0 400 1 6 638 228 274 0 0 chr15 6972352 6972414 -96522560 + MER113A DNA MER1_type 125 186 -128 6 638 358 231 26 0 chr15 6972441 6972519 -96522455 + B3A SINE B2 64 143 -55 6 638 189 0 0 0 chr15 6972750 6972771 -96522203 + (CCA)n Simple_repeat Simple_repeat 1 21 0 6 638 221 225 123 36 chr15 6972773 6972908 -96522066 - L2a LINE L2 -49 3377 3179 6 638 3312 256 145 51 chr15 6973002 6974091 -96520883 + Lx8 LINE L1 6271 7461 -12 6 638 234 0 0 0 chr15 6974131 6974157 -96520817 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 638 536 238 31 88 chr15 6975316 6975542 -96519432 - MARNA DNA Mariner -108 478 266 6 638 207 200 0 0 chr15 6976134 6976179 -96518795 + (TTATA)n Simple_repeat Simple_repeat 5 49 0 6 638 362 326 167 15 chr15 6976188 6976518 -96518456 - Kanga2_a DNA Tc2 -414 474 95 6 638 386 121 15 0 chr15 6977184 6977250 -96517724 + B1_Mm SINE Alu 81 147 0 6 638 258 180 0 0 chr15 6977252 6977313 -96517661 + A-rich Low_complexity Low_complexity 1 61 0 6 638 265 276 95 0 chr15 6978244 6978349 -96516625 - MLT2B4 LTR ERVL -6 548 434 6 638 291 295 71 71 chr15 6978417 6978614 -96516360 - MLT2B4 LTR ERVL -252 263 67 6 638 231 103 0 0 chr15 6978614 6978653 -96516321 + (GA)n Simple_repeat Simple_repeat 1 39 0 7 638 294 183 14 40 chr15 6978653 6978727 -96516247 - MLT2B4 LTR ERVL -484 72 1 6 638 449 34 17 0 chr15 6978872 6978931 -96516043 + (TC)n Simple_repeat Simple_repeat 2 61 0 7 638 234 62 0 0 chr15 6978932 6978964 -96516010 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 638 592 297 17 11 chr15 6979025 6979202 -96515772 + B3A SINE B2 3 180 -18 7 638 616 65 47 0 chr15 6979206 6979313 -96515661 + (CA)n Simple_repeat Simple_repeat 1 112 0 7 638 22 0 0 0 chr15 6979346 6979368 -96515606 + AT_rich Low_complexity Low_complexity 1 22 0 7 638 840 79 0 0 chr15 6979379 6979505 -96515469 + (GA)n Simple_repeat Simple_repeat 2 127 0 7 638 427 368 31 28 chr15 6979999 6980290 -96514684 + B4A SINE B4 1 292 0 7 638 399 257 26 52 chr15 6980515 6980630 -96514344 - Tigger5 DNA MER2_type 0 2406 2295 7 638 411 267 22 22 chr15 6980668 6980806 -96514168 - Tigger5 DNA MER2_type -2252 154 17 7 638 285 305 25 121 chr15 6981171 6981199 -96513775 - B2_Mm1t SINE B2 -14 179 154 7 638 633 76 0 0 chr15 6981199 6981291 -96513683 + (TC)n Simple_repeat Simple_repeat 2 93 0 7 638 450 0 0 0 chr15 6981291 6981340 -96513634 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 638 726 236 12 36 chr15 6981340 6981508 -96513466 - B3A SINE B2 -35 163 1 7 638 312 27 0 0 chr15 6981683 6981720 -96513254 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 7 638 585 267 0 0 chr15 6981730 6981850 -96513124 - PB1D7 SINE Alu 0 120 1 7 638 339 65 0 0 chr15 6982424 6982470 -96512504 + (ATTG)n Simple_repeat Simple_repeat 2 47 0 7 638 279 285 128 16 chr15 6986244 6986369 -96508605 - MIRb SINE MIR -120 148 10 7 638 333 0 0 0 chr15 6988459 6988496 -96506478 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 638 861 243 34 14 chr15 6988692 6988901 -96506073 + ID_B1 SINE B4 11 223 -1 7 638 267 293 0 24 chr15 6990852 6990936 -96504038 + (TATATG)n Simple_repeat Simple_repeat 2 83 0 7 638 370 316 108 15 chr15 6991342 6991602 -96503372 + LTR16B2 LTR ERVL 95 378 -84 7 638 462 181 15 23 chr15 6991974 6992104 -96502870 + G-rich Low_complexity Low_complexity 1 129 0 7 638 249 283 87 0 chr15 6992370 6992462 -96502512 - MLT1A1 LTR MaLR -1 407 308 7 638 498 276 21 0 chr15 6993240 6993385 -96501589 - Lx9 LINE L1 -322 7322 7175 7 638 294 186 206 0 chr15 6993383 6993485 -96501489 + Lx9 LINE L1 7515 7637 -7 7 638 722 220 0 6 chr15 6993889 6994067 -96500907 + CT-rich Low_complexity Low_complexity 4 180 0 7 638 303 346 28 0 chr15 6994074 6994181 -96500793 - PB1D10 SINE Alu -5 112 3 7 638 421 271 40 27 chr15 6995275 6995423 -96499551 + RSINE1 SINE B4 3 152 -13 7 638 890 240 51 0 chr15 6995760 6995956 -96499018 - ID_B1 SINE B4 -1 223 18 7 638 1223 61 0 0 chr15 6995984 6996132 -96498842 - B1_Mus1 SINE Alu 0 148 1 7 638 317 262 46 149 chr15 6996245 6996355 -96498619 - L1MA9 LINE L1 -1 6311 6210 7 638 238 292 65 9 chr15 6996355 6996462 -96498512 + PB1D7 SINE Alu 5 117 -3 7 638 317 262 46 149 chr15 6996462 6996526 -96498448 - L1MA9 LINE L1 -103 6209 6155 7 638 348 265 82 50 chr15 6996547 6996706 -96498268 - RSINE1 SINE B4 0 165 2 7 638 26 30 0 0 chr15 6996716 6996749 -96498225 + AT_rich Low_complexity Low_complexity 1 33 0 7 638 2950 106 15 0 chr15 6997707 6998112 -96496862 + Lx4A LINE L1 6181 6591 -467 7 638 1745 146 42 3 chr15 6998112 6998422 -96496552 + Lx4A LINE L1 6736 7057 -1 7 638 305 303 0 76 chr15 6999593 6999711 -96495263 - MLT1K LTR MaLR -34 561 453 7 638 1168 172 15 15 chr15 6999735 7000000 -96494974 - RMER17C LTR ERVK -11 399 135 7 638 650 171 27 14 chr15 7000000 7000148 -96494826 - RMER17C LTR ERVK -260 150 1 1 638 286 286 61 0 chr15 7000148 7000240 -96494734 + RSINE1 SINE B4 48 145 -20 2 638 289 153 0 27 chr15 7001552 7001626 -96493348 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 638 207 0 0 0 chr15 7001633 7001656 -96493318 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 4 638 396 0 0 0 chr15 7002027 7002071 -96492903 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 5 638 250 302 0 0 chr15 7002470 7002533 -96492441 - ID4_ SINE ID -19 64 2 6 638 223 26 0 71 chr15 7002559 7002601 -96492373 + (CAAAC)n Simple_repeat Simple_repeat 2 40 0 7 638 441 0 0 0 chr15 7002679 7002728 -96492246 + (TC)n Simple_repeat Simple_repeat 2 50 0 8 638 385 257 114 0 chr15 7002949 7003054 -96491920 + B4A SINE B4 150 266 -26 9 638 362 293 203 21 chr15 7003573 7003815 -96491159 - B4A SINE B4 -6 286 1 1 638 573 15 0 0 chr15 7003827 7003893 -96491081 + (TC)n Simple_repeat Simple_repeat 1 66 0 1 638 3555 15 8 0 chr15 7003926 7004319 -96490655 - MTA_Mm LTR MaLR 0 396 1 1 638 9115 42 6 2 chr15 7004319 7005412 -96489562 - MTA_Mm-int LTR MaLR 0 1098 1 1 638 3366 41 8 0 chr15 7005412 7005805 -96489169 - MTA_Mm LTR MaLR 0 396 1 1 638 495 186 0 0 chr15 7006422 7006519 -96488455 + CT-rich Low_complexity Low_complexity 3 99 0 1 638 333 0 0 0 chr15 7007122 7007159 -96487815 + (T)n Simple_repeat Simple_repeat 1 37 0 1 638 463 265 0 29 chr15 7007643 7007779 -96487195 + MT2B LTR ERVL 1 132 -401 1 638 556 266 81 39 chr15 7007786 7008104 -96486870 + MT2B LTR ERVL 238 546 -55 1 638 357 75 0 0 chr15 7008125 7008178 -96486796 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 638 265 160 0 39 chr15 7008181 7008233 -96486741 + MT2B LTR ERVL 535 584 0 1 638 718 296 65 18 chr15 7008468 7008747 -96486227 - B4 SINE B4 0 292 1 1 638 542 309 0 0 chr15 7008947 7009096 -96485878 - RSINE1 SINE B4 -13 152 4 1 638 197 65 32 0 chr15 7009253 7009284 -96485690 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 638 661 236 188 55 chr15 7009305 7009624 -96485350 - Lx7 LINE L1 0 7696 7323 2 638 180 0 0 0 chr15 7009624 7009644 -96485330 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2 638 661 236 188 55 chr15 7009644 7009728 -96485246 - Lx7 LINE L1 -374 7322 7239 2 638 1343 92 16 16 chr15 7010028 7010216 -96484758 - B2_Mm2 SINE B2 -7 188 1 2 638 27 0 0 0 chr15 7011295 7011322 -96483652 + AT_rich Low_complexity Low_complexity 1 27 0 2 638 915 174 42 80 chr15 7012652 7012889 -96482085 - RMER12 LTR ERVK -106 1216 989 2 638 333 0 0 0 chr15 7012889 7012926 -96482048 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 638 5342 120 8 18 chr15 7012926 7013812 -96481162 - RMER12 LTR ERVK -432 890 14 2 638 1018 259 53 50 chr15 7014222 7014560 -96480414 - L1MA4 LINE L1 -268 6032 5694 2 638 489 34 0 0 chr15 7015999 7016058 -96478916 + (GGA)n Simple_repeat Simple_repeat 1 59 0 2 638 316 116 46 11 chr15 7016181 7016268 -96478706 + CT-rich Low_complexity Low_complexity 1 90 0 2 638 942 57 0 0 chr15 7017046 7017170 -96477804 + B1_Mus1 SINE Alu 2 125 -23 2 638 366 238 0 56 chr15 7017873 7017962 -96477012 + B1F SINE Alu 39 122 -27 3 638 236 175 35 0 chr15 7017971 7018028 -96476946 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 3 638 499 239 25 25 chr15 7018363 7018483 -96476491 - B1_Mur1 SINE Alu -12 137 18 3 638 259 241 83 0 chr15 7019116 7019249 -96475725 - Charlie5 DNA MER1_type -20 2604 2461 3 638 494 232 83 99 chr15 7019383 7019636 -96475338 + B4A SINE B4 2 250 -42 3 638 420 20 0 0 chr15 7019669 7019718 -96475256 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 638 269 361 8 0 chr15 7019823 7019945 -96475029 - Charlie5 DNA MER1_type -2501 123 1 3 638 274 325 79 24 chr15 7020076 7020202 -96474772 - MIR SINE MIR -115 147 15 3 638 300 296 168 12 chr15 7021417 7021578 -96473396 + L1MEc LINE L1 32 217 -6183 3 638 323 299 77 68 chr15 7021782 7022030 -96472944 + L1MEc LINE L1 525 774 -5626 3 638 347 239 0 0 chr15 7022228 7022318 -96472656 + L1M5 LINE L1 5522 5611 -689 3 638 508 223 162 0 chr15 7022440 7022588 -96472386 + MTD LTR MaLR 4 175 -244 3 638 730 231 38 47 chr15 7022772 7023008 -96471966 + MTD LTR MaLR 186 419 0 3 638 353 198 62 0 chr15 7024020 7024101 -96470873 + MTEb LTR MaLR 294 379 0 4 638 198 103 0 0 chr15 7024888 7024917 -96470057 + (CCCTAA)n Simple_repeat Simple_repeat 6 34 0 4 638 501 17 0 0 chr15 7025163 7025221 -96469753 + (GA)n Simple_repeat Simple_repeat 1 58 0 4 638 296 242 69 29 chr15 7025641 7025743 -96469231 - PB1D7 SINE Alu -3 117 12 4 638 405 264 82 14 chr15 7025678 7025824 -96469150 - ID_B1 SINE B4 -68 156 1 4 638 216 0 0 0 chr15 7025922 7025946 -96469028 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 4 638 241 191 28 56 chr15 7027157 7027229 -96467745 + B3A SINE B2 2 71 -127 4 638 492 18 0 0 chr15 7028880 7028937 -96466037 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 638 800 264 49 50 chr15 7028953 7029327 -96465647 - Lx7 LINE L1 -1800 5896 5546 4 638 188 86 29 0 chr15 7029586 7029621 -96465353 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 4 638 1179 68 0 0 chr15 7029627 7029774 -96465200 - B1_Mm SINE Alu 0 147 1 5 638 388 302 34 40 chr15 7029830 7030006 -96464968 - MER20 DNA MER1_type -32 187 13 5 638 1136 68 0 0 chr15 7030633 7030779 -96464195 + B1_Mus2 SINE Alu 2 147 0 5 638 220 83 20 20 chr15 7030779 7030828 -96464146 + (CAAAAA)n Simple_repeat Simple_repeat 1 49 0 5 638 216 0 0 0 chr15 7031145 7031169 -96463805 + (C)n Simple_repeat Simple_repeat 1 24 0 5 638 333 0 0 0 chr15 7031626 7031663 -96463311 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 638 1038 155 89 10 chr15 7031664 7031866 -96463108 - Lx4A LINE L1 -6 7052 6835 5 638 481 207 0 43 chr15 7032599 7032786 -96462188 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 638 1194 315 24 36 chr15 7033259 7033468 -96461506 + L1MA4 LINE L1 5438 5646 -654 5 638 2570 174 22 35 chr15 7033468 7034004 -96460970 - RLTR24 LTR ERV1 0 529 1 5 638 1194 315 24 36 chr15 7034004 7034295 -96460679 + L1MA4 LINE L1 5647 5932 -368 5 638 369 129 0 0 chr15 7034306 7034376 -96460598 + (TG)n Simple_repeat Simple_repeat 2 71 0 6 638 21 57 0 0 chr15 7034586 7034621 -96460353 + AT_rich Low_complexity Low_complexity 1 35 0 6 638 471 299 36 31 chr15 7034759 7034952 -96460022 - MIR SINE MIR -26 236 43 6 638 376 255 149 18 chr15 7036400 7036568 -96458406 - MLT1A LTR MaLR -26 348 159 6 638 266 309 0 129 chr15 7037824 7037917 -96457057 - MTE2a LTR MaLR -298 81 1 6 638 1141 136 135 5 chr15 7038330 7038530 -96456444 - URR1A DNA MER1_type 0 226 1 6 638 338 290 90 0 chr15 7039419 7039519 -96455455 + MER5A DNA MER1_type 2 110 -79 6 638 244 312 31 20 chr15 7041002 7041100 -96453874 + MER91A DNA Tip100 4 102 -94 6 638 748 271 77 45 chr15 7041312 7041691 -96453283 - L1MC2 LINE L1 -10 6334 5944 6 638 477 247 62 108 chr15 7043087 7043382 -96451592 + L1MA4 LINE L1 5369 5651 -532 6 638 2175 139 72 8 chr15 7043382 7043773 -96451201 - MTC LTR MaLR 0 421 6 7 638 548 295 31 66 chr15 7043792 7043907 -96451067 + L1MA4 LINE L1 5671 5781 -519 6 638 441 0 0 0 chr15 7043907 7043956 -96451018 + (TA)n Simple_repeat Simple_repeat 1 49 0 7 638 1466 43 11 16 chr15 7043962 7044149 -96450825 - B2_Mm2 SINE B2 -9 186 1 7 638 548 295 31 66 chr15 7044149 7044313 -96450661 + L1MA4 LINE L1 5789 5945 -355 6 638 258 207 0 0 chr15 7044313 7044371 -96450603 + (TG)n Simple_repeat Simple_repeat 2 59 0 7 638 783 232 164 99 chr15 7044936 7045290 -96449684 + MTEa LTR MaLR 3 379 0 7 638 324 301 216 0 chr15 7046337 7046536 -96448438 - L1MA8 LINE L1 -373 5918 5677 7 638 561 234 8 24 chr15 7046545 7046672 -96448302 + RSINE1 SINE B4 41 165 0 7 638 482 259 186 32 chr15 7046928 7047292 -96447682 + L1MA4 LINE L1 5626 6023 -277 7 638 728 273 75 0 chr15 7047831 7048018 -96446956 + B4A SINE B4 8 208 -84 7 638 501 17 0 0 chr15 7048021 7048079 -96446895 + (GGGA)n Simple_repeat Simple_repeat 4 61 0 7 638 279 0 0 0 chr15 7048147 7048178 -96446796 + (GA)n Simple_repeat Simple_repeat 2 32 0 8 638 357 290 0 0 chr15 7048713 7048889 -96446085 + (TG)n Simple_repeat Simple_repeat 1 176 0 8 638 270 0 0 0 chr15 7048968 7048998 -96445976 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 8 638 4140 197 28 6 chr15 7048998 7049781 -96445193 - Lx5 LINE L1 -16 7034 6235 8 638 322 221 62 38 chr15 7050712 7050792 -96444182 - ID4_ SINE ID 0 83 2 8 638 269 250 84 84 chr15 7050800 7050846 -96444128 - ID_B1 SINE B4 -8 216 167 8 638 623 163 131 8 chr15 7050846 7050976 -96443998 - B1_Mus1 SINE Alu 0 148 3 8 638 269 250 84 84 chr15 7050976 7051060 -96443914 - ID_B1 SINE B4 -58 166 86 8 638 687 25 0 0 chr15 7052470 7052551 -96442423 + (TTC)n Simple_repeat Simple_repeat 2 82 0 8 638 270 0 0 0 chr15 7052741 7052771 -96442203 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 8 638 215 344 68 60 chr15 7052771 7052785 -96442189 - B1F SINE Alu -12 137 4 8 638 336 322 42 34 chr15 7052785 7052904 -96442070 - ID_B1 SINE B4 -20 204 85 9 638 1104 284 134 35 chr15 7053078 7053969 -96441005 - L1MA9 LINE L1 -215 6097 5115 9 638 477 374 23 50 chr15 7054418 7054677 -96440297 - MER47B DNA MER2_type -166 252 1 9 638 253 340 88 62 chr15 7055622 7055942 -96439032 + MLT1I LTR MaLR 59 386 -25 9 638 1373 84 15 40 chr15 7056090 7056289 -96438685 - B2_Mm2 SINE B2 0 195 2 9 638 218 375 107 0 chr15 7056461 7056573 -96438401 - MIR SINE MIR -2 260 137 9 638 2630 281 96 33 chr15 7056590 7057633 -96437341 - Lx8 LINE L1 -2 7471 6363 9 638 180 244 22 0 chr15 7057650 7057695 -96437279 - MIRm SINE MIR -135 141 96 9 638 1181 182 186 1 chr15 7057737 7058037 -96436937 - ORR1C1 LTR MaLR 0 378 6 9 638 304 379 54 20 chr15 7059155 7059303 -96435671 + MLT1I LTR MaLR 76 228 -183 9 638 3731 152 127 93 chr15 7059581 7060452 -96434522 - RMER19B LTR ERVK -1 901 1 1 638 735 286 79 127 chr15 7060452 7060868 -96434106 + MTD LTR MaLR 24 419 0 1 638 342 0 0 0 chr15 7060922 7060960 -96434014 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 638 229 336 154 8 chr15 7061183 7061300 -96433674 - MLT1K LTR MaLR -112 483 350 1 638 956 192 50 23 chr15 7061405 7061609 -96433365 - MTC LTR MaLR -135 286 74 1 638 468 0 0 0 chr15 7061609 7061661 -96433313 + (TTTTG)n Simple_repeat Simple_repeat 5 56 0 1 638 1014 55 47 0 chr15 7061661 7061789 -96433185 - B1_Mm SINE Alu -12 135 2 1 638 956 192 50 23 chr15 7061789 7061802 -96433172 - MTC LTR MaLR -348 73 63 1 638 589 116 0 0 chr15 7061821 7061907 -96433067 - MTC LTR MaLR -335 86 1 1 638 625 283 34 14 chr15 7062952 7063099 -96431875 + RSINE1 SINE B4 3 152 -13 1 638 26 30 0 0 chr15 7063114 7063147 -96431827 + AT_rich Low_complexity Low_complexity 1 33 0 1 638 1168 117 50 0 chr15 7063148 7063327 -96431647 - B2_Mm2 SINE B2 -6 189 2 1 638 26 0 0 0 chr15 7063373 7063399 -96431575 + AT_rich Low_complexity Low_complexity 1 26 0 1 638 265 264 0 0 chr15 7063401 7063454 -96431520 + BC1_Mm scRNA scRNA 7 59 -93 1 638 615 14 0 0 chr15 7063454 7063526 -96431448 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 638 293 118 20 0 chr15 7063687 7063738 -96431236 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 1 638 549 250 145 23 chr15 7064488 7064623 -96430351 + MER2 DNA MER2_type 95 240 -105 1 638 333 0 0 0 chr15 7064623 7064660 -96430314 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 638 549 250 145 23 chr15 7064660 7064745 -96430229 + MER2 DNA MER2_type 241 342 -3 1 638 181 386 45 0 chr15 7065156 7065244 -96429730 + MIRc SINE MIR 39 130 -138 1 638 421 198 44 0 chr15 7065641 7065732 -96429242 + B4A SINE B4 150 244 -48 1 638 235 331 58 88 chr15 7066078 7066322 -96428652 - MIRb SINE MIR 0 268 29 1 638 263 340 62 0 chr15 7066401 7066498 -96428476 + MamRep605 Unknown Unknown 625 727 -149 1 638 603 301 154 29 chr15 7069000 7069240 -96425734 + LTR16A LTR ERVL 1 270 -181 1 638 282 56 0 0 chr15 7069317 7069353 -96425621 + (TTTTC)n Simple_repeat Simple_repeat 4 39 0 1 638 811 65 9 0 chr15 7069353 7069461 -96425513 - B1_Mus2 SINE Alu 0 147 39 1 638 198 357 121 0 chr15 7069723 7069880 -96425094 + L2 LINE L2 2859 3034 -385 1 638 21 0 0 0 chr15 7070401 7070422 -96424552 + AT_rich Low_complexity Low_complexity 1 21 0 1 638 841 161 6 45 chr15 7070509 7070665 -96424309 + B1_Mur4 SINE Alu 1 150 0 1 638 203 147 0 0 chr15 7070811 7070845 -96424129 + (TCTCC)n Simple_repeat Simple_repeat 3 36 0 1 638 449 227 41 10 chr15 7071002 7071100 -96423874 + MER63D DNA AcHobo 282 382 -679 1 638 794 92 17 0 chr15 7071834 7071954 -96423020 + (GAAA)n Simple_repeat Simple_repeat 3 124 0 1 638 542 341 19 12 chr15 7072202 7072389 -96422585 + B4 SINE B4 74 276 -16 1 638 222 118 0 0 chr15 7072436 7072470 -96422504 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 638 1497 214 39 20 chr15 7072592 7072934 -96422040 + MTE2b LTR MaLR 18 369 -1 1 638 432 0 0 0 chr15 7074522 7074570 -96420404 + (GGA)n Simple_repeat Simple_repeat 3 50 0 1 638 706 108 21 28 chr15 7074635 7074778 -96420196 + GA-rich Low_complexity Low_complexity 4 145 0 1 638 1149 62 7 0 chr15 7075590 7075735 -96419239 - B1_Mus2 SINE Alu 0 147 2 1 638 276 324 86 26 chr15 7075735 7075887 -96419087 + L4 LINE RTE 1668 1828 -201 1 638 180 0 0 0 chr15 7075922 7075942 -96419032 + (TTA)n Simple_repeat Simple_repeat 1 20 0 1 638 283 73 18 18 chr15 7076166 7076222 -96418752 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 1 638 342 169 0 0 chr15 7076730 7076795 -96418179 + GA-rich Low_complexity Low_complexity 2 66 0 1 638 23 33 0 0 chr15 7077196 7077226 -96417748 + AT_rich Low_complexity Low_complexity 1 30 0 1 638 344 307 69 35 chr15 7077579 7077724 -96417250 + Arthur1 DNA Tip100 81 230 -3717 1 638 371 279 0 46 chr15 7077715 7077824 -96417150 + Arthur1 DNA Tip100 3849 3946 -1 1 79 200 269 90 0 chr15 7077833 7077900 -96417074 + MIR SINE MIR 151 223 -39 1 639 440 229 91 25 chr15 7078098 7078219 -96416755 - ORSL DNA Tip100 -119 156 28 1 639 29 101 0 0 chr15 7079415 7079514 -96415460 + GC_rich Low_complexity Low_complexity 1 99 0 1 639 24 77 0 0 chr15 7079832 7079884 -96415090 + GC_rich Low_complexity Low_complexity 1 52 0 1 639 677 185 42 0 chr15 7081894 7082034 -96412940 + B1_Mur2 SINE Alu 3 148 -1 1 639 180 0 0 0 chr15 7082105 7082125 -96412849 + (T)n Simple_repeat Simple_repeat 1 20 0 1 639 261 213 16 32 chr15 7082371 7082434 -96412540 + CT-rich Low_complexity Low_complexity 3 64 0 1 639 25 0 0 0 chr15 7083488 7083513 -96411461 + AT_rich Low_complexity Low_complexity 1 25 0 1 639 807 152 6 11 chr15 7083837 7084017 -96410957 + CT-rich Low_complexity Low_complexity 2 180 0 1 639 242 148 74 0 chr15 7084964 7085018 -96409956 + B2_Mm1t SINE B2 130 187 -6 1 639 198 0 0 0 chr15 7085264 7085286 -96409688 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 1 639 1565 43 5 0 chr15 7085369 7085555 -96409419 + B2_Mm1t SINE B2 1 187 -6 1 639 201 342 70 3 chr15 7085593 7085733 -96409241 - MIR3 SINE MIR -23 185 43 1 639 326 263 0 0 chr15 7086308 7086384 -96408590 + L1M5 LINE L1 5538 5613 -511 1 639 1147 51 0 0 chr15 7086532 7086669 -96408305 - B1_Mus2 SINE Alu -10 137 1 1 639 438 291 59 15 chr15 7087343 7087479 -96407495 - RSINE1 SINE B4 -6 159 18 1 639 265 62 61 15 chr15 7087502 7087568 -96407406 + (TTTG)n Simple_repeat Simple_repeat 2 70 0 1 639 207 105 0 26 chr15 7089255 7089294 -96405680 + (TTTTTG)n Simple_repeat Simple_repeat 2 39 0 1 639 501 266 56 8 chr15 7090023 7090148 -96404826 + B1_Mur1 SINE Alu 19 149 0 1 639 216 0 0 0 chr15 7090262 7090286 -96404688 + (ATATG)n Simple_repeat Simple_repeat 2 25 0 1 639 1831 169 112 16 chr15 7090329 7090713 -96404261 + MTC LTR MaLR 1 421 0 1 639 331 245 64 73 chr15 7091614 7091724 -96403250 - PB1D7 SINE Alu -10 110 2 1 639 748 167 19 65 chr15 7092160 7092314 -96402660 - B1_Mur2 SINE Alu 0 149 3 1 639 462 244 26 9 chr15 7092364 7092480 -96402494 + HAL1-2a_MD LINE L1 2377 2494 -530 1 639 319 284 105 0 chr15 7092484 7092579 -96402395 + MIRb SINE MIR 33 137 -131 1 639 583 244 135 49 chr15 7093962 7094250 -96400724 + MTEa LTR MaLR 43 355 -24 1 639 264 77 0 0 chr15 7094633 7094672 -96400302 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 639 286 235 53 105 chr15 7094710 7094805 -96400169 + Charlie8 DNA MER1_type 26 115 -2313 1 639 263 245 250 10 chr15 7095601 7095718 -96399256 + MIR SINE MIR 52 198 -70 1 639 194 308 97 52 chr15 7096672 7096826 -96398148 - L2 LINE L2 -1035 2384 2224 1 639 601 14 0 0 chr15 7096917 7096988 -96397986 + LTRIS_Mm LTR ERV1 1 71 -411 1 639 3273 51 5 0 chr15 7097313 7097707 -96397267 - MTA_Mm LTR MaLR 0 396 1 1 639 774 272 95 23 chr15 7098127 7098390 -96396584 - B4 SINE B4 -8 284 3 1 639 314 292 30 78 chr15 7098555 7098826 -96396148 + RMER17C LTR ERVK 104 361 -49 1 639 644 338 58 21 chr15 7099493 7099820 -96395154 - MER119 DNA MER1_type -31 552 214 1 639 238 258 0 29 chr15 7100367 7100435 -96394539 + C-rich Low_complexity Low_complexity 1 66 0 1 639 369 271 37 44 chr15 7102302 7102437 -96392537 - MIRb SINE MIR -133 135 2 1 639 579 309 1 61 chr15 7102945 7103168 -96391806 + B3A SINE B2 1 205 -11 1 639 240 35 0 0 chr15 7103184 7103213 -96391761 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 639 537 247 40 34 chr15 7103466 7103642 -96391332 + L1_Rod LINE L1 5593 5769 -78 1 639 344 292 91 9 chr15 7104740 7104971 -96390003 - L1ME1 LINE L1 -17 6162 5913 1 639 349 278 47 8 chr15 7105361 7105488 -96389486 + CT-rich Low_complexity Low_complexity 6 137 0 1 639 1104 82 0 20 chr15 7105509 7105659 -96389315 - B1_Mm SINE Alu 0 147 1 1 639 2366 230 47 38 chr15 7106050 7106624 -96388350 - Lx9 LINE L1 -306 7338 6760 1 639 647 205 33 7 chr15 7106627 7106779 -96388195 + Lx9 LINE L1 7343 7498 -146 1 639 477 216 64 57 chr15 7106805 7106962 -96388012 + Lx9 LINE L1 7479 7636 -8 1 639 288 261 150 83 chr15 7107599 7107779 -96387195 - MLT1I LTR MaLR -83 429 238 1 639 406 344 53 16 chr15 7108365 7108554 -96386420 - MLT1I LTR MaLR -198 213 18 1 639 180 0 0 0 chr15 7108764 7108784 -96386190 + (GA)n Simple_repeat Simple_repeat 2 21 0 1 639 373 255 20 10 chr15 7109588 7109687 -96385287 - PB1D10 SINE Alu -15 102 3 1 639 363 246 51 34 chr15 7110452 7110570 -96384404 + RSINE1 SINE B4 16 135 -30 1 639 639 39 0 0 chr15 7110918 7110996 -96383978 + (TTCC)n Simple_repeat Simple_repeat 4 81 0 1 639 354 162 0 0 chr15 7110996 7111070 -96383904 + CT-rich Low_complexity Low_complexity 2 75 0 1 639 1259 34 0 7 chr15 7111104 7111252 -96383722 + B1_Mus2 SINE Alu 1 147 0 1 639 245 192 112 25 chr15 7111294 7111374 -96383600 - Lx8 LINE L1 -29 7444 7358 1 639 330 176 0 0 chr15 7111397 7111482 -96383492 + A-rich Low_complexity Low_complexity 1 85 0 1 639 3725 261 52 49 chr15 7111485 7112726 -96382248 - Lx7 LINE L1 -334 7362 6119 1 639 398 279 35 57 chr15 7113427 7113623 -96381351 + ORR1D2 LTR MaLR 223 405 -14 1 639 1231 27 0 26 chr15 7114180 7114331 -96380643 + B1_Mus1 SINE Alu 2 148 0 1 639 409 240 67 9 chr15 7114868 7114973 -96380001 + RSINE1 SINE B4 38 148 -17 1 639 215 125 25 0 chr15 7115222 7115262 -96379712 + (TAA)n Simple_repeat Simple_repeat 1 41 0 1 639 342 98 0 0 chr15 7115561 7115612 -96379362 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 639 646 239 28 0 chr15 7118439 7118581 -96376393 + B1F SINE Alu 4 149 0 2 639 744 295 65 35 chr15 7118589 7118849 -96376125 + B4A SINE B4 17 284 -8 2 639 213 156 0 22 chr15 7118873 7118919 -96376055 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 2 639 761 234 69 0 chr15 7120227 7120239 -96374735 + B3 SINE B2 6 17 -199 2 639 387 0 0 0 chr15 7120239 7120282 -96374692 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 639 761 234 69 0 chr15 7120282 7120457 -96374517 + B3 SINE B2 18 205 -11 2 639 446 247 99 81 chr15 7120551 7120762 -96374212 + ID_B1 SINE B4 10 224 0 2 639 190 81 0 51 chr15 7121022 7121061 -96373913 + (TTTTG)n Simple_repeat Simple_repeat 1 37 0 2 639 627 227 23 0 chr15 7121300 7121432 -96373542 - B1_Mur1 SINE Alu -7 142 8 2 639 300 281 18 141 chr15 7121858 7122028 -96372946 + RSINE1 SINE B4 2 150 -15 2 639 44 56 0 0 chr15 7123670 7123742 -96371232 + AT_rich Low_complexity Low_complexity 1 72 0 2 639 236 296 82 0 chr15 7124212 7124310 -96370664 - L1MD LINE L1 -438 5921 5816 2 639 198 91 0 0 chr15 7124524 7124557 -96370417 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2 639 1131 62 7 20 chr15 7124562 7124710 -96370264 - B1_Mus2 SINE Alu -1 146 1 2 639 585 174 175 57 chr15 7124747 7124924 -96370050 - B3A SINE B2 0 198 1 2 639 441 36 0 0 chr15 7125157 7125212 -96369762 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 639 282 29 0 0 chr15 7125793 7125828 -96369146 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 639 25 0 0 0 chr15 7126369 7126394 -96368580 + AT_rich Low_complexity Low_complexity 1 25 0 2 639 252 0 0 0 chr15 7126572 7126600 -96368374 + (TAA)n Simple_repeat Simple_repeat 3 30 0 2 639 616 239 171 77 chr15 7126855 7127218 -96367756 + RMER10A LTR ERVL 25 421 -21 2 639 544 270 48 0 chr15 7128274 7128400 -96366574 - RSINE1 SINE B4 -31 134 3 2 639 478 228 39 47 chr15 7129221 7129350 -96365624 - B1F SINE Alu 0 149 22 2 639 1190 49 7 0 chr15 7129503 7129646 -96365328 + B1_Mus1 SINE Alu 5 148 0 2 639 180 0 0 0 chr15 7129658 7129678 -96365296 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 2 639 180 0 0 0 chr15 7129771 7129791 -96365183 + (C)n Simple_repeat Simple_repeat 1 20 0 2 639 342 225 162 0 chr15 7129821 7129901 -96365073 - ID_B1 SINE B4 -5 219 127 2 639 218 56 0 27 chr15 7129994 7130031 -96364943 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 2 639 864 66 73 99 chr15 7130033 7130184 -96364790 - B1_Mus2 SINE Alu 0 147 1 2 639 250 273 121 0 chr15 7132183 7132249 -96362725 - B1_Mus2 SINE Alu -73 74 1 2 639 22 35 0 0 chr15 7134571 7134600 -96360374 + AT_rich Low_complexity Low_complexity 1 29 0 2 639 1216 64 84 34 chr15 7135163 7135341 -96359633 + B2_Mm2 SINE B2 1 187 -8 2 639 1561 166 34 27 chr15 7136096 7136580 -96358394 - RMER13B LTR ERVK -42 866 282 2 639 247 240 0 0 chr15 7136611 7136661 -96358313 - MIR SINE MIR -14 248 199 2 639 525 244 30 42 chr15 7137101 7137118 -96357856 + CYRA11_Mm Unknown Y-chromosome 157 248 -369 2 639 922 116 0 7 chr15 7137118 7137257 -96357717 - URR1B DNA MER1_type -2 223 86 2 639 525 244 30 42 chr15 7137257 7137268 -96357706 + CYRA11_Mm Unknown Y-chromosome 249 321 -296 2 639 584 269 69 78 chr15 7137738 7137956 -96357018 + MER20 DNA MER1_type 1 216 -3 2 639 342 121 0 0 chr15 7138720 7138786 -96356188 + (GA)n Simple_repeat Simple_repeat 2 67 0 2 639 445 246 8 66 chr15 7139459 7139581 -96355393 + PB1D10 SINE Alu 1 115 -2 2 639 247 274 0 0 chr15 7139602 7139653 -96355321 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 639 26 30 0 0 chr15 7142603 7142636 -96352338 + AT_rich Low_complexity Low_complexity 1 33 0 2 639 664 168 33 8 chr15 7142636 7142756 -96352218 - B1_Mur2 SINE Alu 0 149 27 2 639 518 208 73 0 chr15 7142747 7142843 -96352131 - B1_Mus2 SINE Alu -44 103 1 2 639 189 147 0 0 chr15 7143104 7143138 -96351836 + (CCCCCT)n Simple_repeat Simple_repeat 2 35 0 2 639 198 0 0 0 chr15 7143493 7143515 -96351459 + (T)n Simple_repeat Simple_repeat 1 22 0 2 639 225 0 0 0 chr15 7145625 7145650 -96349324 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 639 23 0 0 0 chr15 7146646 7146669 -96348305 + AT_rich Low_complexity Low_complexity 1 23 0 2 639 610 158 98 70 chr15 7147806 7147949 -96347025 + B1_Mur1 SINE Alu 2 148 -1 2 639 369 0 0 0 chr15 7148664 7148705 -96346269 + (T)n Simple_repeat Simple_repeat 1 41 0 2 639 183 42 0 0 chr15 7150211 7150235 -96344739 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 639 1276 237 17 47 chr15 7152468 7152769 -96342205 - MTD LTR MaLR -14 405 122 2 639 378 239 11 22 chr15 7152769 7152949 -96342025 + (TA)n Simple_repeat Simple_repeat 2 179 0 2 639 530 214 0 0 chr15 7152957 7153055 -96341919 - MTD LTR MaLR -321 98 1 2 639 208 91 45 0 chr15 7153861 7153905 -96341069 + (CCCCCT)n Simple_repeat Simple_repeat 3 48 0 2 639 416 328 68 110 chr15 7154847 7155230 -96339744 + MLT1H LTR MaLR 4 370 -179 2 639 184 299 48 64 chr15 7156068 7156193 -96338781 + L3 LINE CR1 2030 2152 -2337 2 639 269 145 0 16 chr15 7157239 7157302 -96337672 + CT-rich Low_complexity Low_complexity 1 62 0 2 639 217 194 0 65 chr15 7158721 7158798 -96336176 + (CAAA)n Simple_repeat Simple_repeat 1 72 0 2 639 181 359 36 76 chr15 7158988 7159211 -96335763 + L2a LINE L2 3181 3394 -32 2 639 256 244 132 12 chr15 7159253 7159336 -96335638 + MIRb SINE MIR 144 236 -32 2 639 3448 38 0 2 chr15 7160723 7161120 -96333854 + MTA_Mm LTR MaLR 1 396 0 2 639 525 265 35 64 chr15 7161331 7161644 -96333330 + L1_Rod LINE L1 5428 5720 -127 2 639 180 0 0 0 chr15 7161656 7161676 -96333298 + (GAAA)n Simple_repeat Simple_repeat 4 23 0 2 639 570 279 145 8 chr15 7162406 7162701 -96332273 - L1MB2 LINE L1 -10 6161 5826 2 639 826 309 85 21 chr15 7162772 7163112 -96331862 + MLT1C LTR MaLR 45 406 -61 2 639 960 135 0 26 chr15 7163151 7163303 -96331671 - B1_Mur3 SINE Alu 0 149 2 2 639 596 106 11 0 chr15 7163390 7163484 -96331490 + (GA)n Simple_repeat Simple_repeat 2 96 0 2 639 555 16 0 0 chr15 7163484 7163548 -96331426 + (GGAA)n Simple_repeat Simple_repeat 1 64 0 2 639 182 167 0 27 chr15 7163784 7163821 -96331153 - L2a LINE L2 -1 3425 3390 2 639 587 278 6 24 chr15 7164269 7164426 -96330548 + RSINE1 SINE B4 3 158 -7 2 639 1368 67 0 0 chr15 7164426 7164606 -96330368 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 639 211 346 37 73 chr15 7165379 7165488 -96329486 - PB1D9 SINE Alu -15 105 1 2 639 330 151 0 0 chr15 7165828 7165901 -96329073 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 639 804 116 0 125 chr15 7165902 7166070 -96328904 - ORR1B1 LTR MaLR -245 149 3 2 639 275 95 0 23 chr15 7166336 7166379 -96328595 + U2 snRNA snRNA 1 42 -146 2 639 315 281 37 0 chr15 7166369 7166451 -96328523 - ID_B1 SINE B4 -53 171 87 2 639 187 314 132 38 chr15 7166482 7166588 -96328386 - MIRc SINE MIR -124 144 29 2 639 405 0 0 0 chr15 7167605 7167650 -96327324 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2 639 908 176 0 7 chr15 7168020 7168169 -96326805 - B1_Mur4 SINE Alu -1 149 2 2 639 303 270 75 144 chr15 7168225 7168385 -96326589 + B4 SINE B4 71 219 -73 2 639 614 230 28 35 chr15 7168251 7168395 -96326579 + B1_Mur1 SINE Alu 7 149 0 2 639 778 241 12 24 chr15 7168477 7168647 -96326327 + B3 SINE B2 5 172 -44 2 639 1092 133 0 0 chr15 7168660 7168840 -96326134 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 639 695 87 10 0 chr15 7168840 7168944 -96326030 + (GGAA)n Simple_repeat Simple_repeat 2 106 0 2 639 387 352 44 35 chr15 7169231 7169434 -96325540 - MER58A DNA MER1_type 0 224 20 2 639 252 22 67 0 chr15 7169561 7169606 -96325368 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 2 639 277 350 94 17 chr15 7171136 7171316 -96323658 + MLT1L LTR MaLR 413 606 -4 2 639 342 0 0 0 chr15 7171510 7171548 -96323426 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 639 460 206 56 0 chr15 7171687 7171794 -96323180 - ORR1D1 LTR MaLR -261 113 1 2 639 222 339 0 0 chr15 7174025 7174090 -96320884 + G-rich Low_complexity Low_complexity 1 65 0 2 639 387 0 0 0 chr15 7175989 7176032 -96318942 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 639 1314 280 77 39 chr15 7176722 7177190 -96317784 + RMER5 LTR ERV1 5 490 -44 2 639 260 314 0 0 chr15 7177865 7177935 -96317039 + (TG)n Simple_repeat Simple_repeat 2 71 0 2 639 273 29 0 0 chr15 7178099 7178133 -96316841 + (CAA)n Simple_repeat Simple_repeat 2 35 0 2 639 454 264 0 28 chr15 7178146 7178255 -96316719 + B1F1 SINE Alu 24 129 -20 2 639 3618 13 2 0 chr15 7178260 7178655 -96316319 + MTA_Mm LTR MaLR 1 396 0 2 639 317 280 0 106 chr15 7178655 7178672 -96316302 + ID_B1 SINE B4 206 222 -2 2 639 387 0 0 0 chr15 7178686 7178729 -96316245 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 639 1047 275 7 78 chr15 7179739 7180047 -96314927 - B4A SINE B4 -6 286 1 2 639 271 336 23 54 chr15 7180722 7180851 -96314123 - MIR SINE MIR -37 225 101 2 639 243 152 0 0 chr15 7181175 7181221 -96313753 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 639 508 234 64 8 chr15 7181290 7181415 -96313559 + B1F SINE Alu 13 144 -5 2 639 285 297 0 0 chr15 7181428 7181502 -96313472 + ID4_ SINE ID 2 75 -8 2 639 1615 196 22 142 chr15 7181953 7182412 -96312562 + RMER15 LTR ERVL 41 444 -131 3 639 225 277 33 86 chr15 7184428 7184564 -96310410 + MIRb SINE MIR 86 210 -52 3 639 379 285 96 68 chr15 7185211 7185388 -96309586 + B3A SINE B2 1 182 -16 3 639 285 385 61 19 chr15 7185484 7185696 -96309278 - L2b LINE L2 0 3375 3155 3 639 266 256 12 71 chr15 7186030 7186114 -96308860 - ID4_ SINE ID -4 79 1 3 639 205 366 37 112 chr15 7186569 7186784 -96308190 - MIR SINE MIR -28 234 36 3 639 2353 102 6 0 chr15 7186922 7187247 -96307727 + ORR1A2 LTR MaLR 1 327 0 3 639 426 121 0 0 chr15 7187426 7187492 -96307482 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 639 664 199 101 14 chr15 7187500 7187648 -96307326 - RSINE1 SINE B4 -2 163 3 3 639 1173 317 50 92 chr15 7187862 7188397 -96306577 + MLT2B1 LTR ERVL 1 513 -7 3 639 358 257 21 0 chr15 7188602 7188609 -96306365 + (CATATA)n Simple_repeat Simple_repeat 4 10 0 3 639 228 35 0 0 chr15 7188609 7188638 -96306336 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 639 358 257 21 0 chr15 7188638 7188774 -96306200 + (CATATA)n Simple_repeat Simple_repeat 5 143 0 3 639 312 286 12 26 chr15 7188779 7188899 -96306075 - ORR1E LTR MaLR 0 370 254 3 639 531 250 8 8 chr15 7188907 7189024 -96305950 + MTC LTR MaLR 305 421 0 3 639 581 252 15 30 chr15 7189068 7189203 -96305771 - B1_Mur1 SINE Alu 0 149 17 3 639 252 291 16 91 chr15 7189111 7189232 -96305742 - MT2B LTR ERVL -338 263 152 3 639 372 292 96 118 chr15 7189250 7189625 -96305349 + MLT1A0 LTR MaLR 1 357 -8 3 639 371 21 0 20 chr15 7190516 7190565 -96304409 + (TAA)n Simple_repeat Simple_repeat 1 48 0 3 639 1292 293 77 51 chr15 7191341 7191910 -96303064 + Lx8 LINE L1 6769 7352 -121 3 639 564 233 11 11 chr15 7192063 7192241 -96302733 + GA-rich Low_complexity Low_complexity 2 179 0 3 639 440 325 160 26 chr15 7192719 7193026 -96301948 + MLT1J2 LTR MaLR 42 389 -59 3 639 483 18 0 0 chr15 7194494 7194550 -96300424 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 639 261 139 0 0 chr15 7194550 7194593 -96300381 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 639 307 269 0 11 chr15 7194594 7194688 -96300286 + (TG)n Simple_repeat Simple_repeat 2 94 0 3 639 239 150 0 16 chr15 7194726 7194787 -96300187 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 639 466 285 12 15 chr15 7194823 7195162 -96299812 + (TG)n Simple_repeat Simple_repeat 1 337 0 3 639 657 216 85 101 chr15 7196131 7196378 -96298596 + MLT1B LTR MaLR 61 303 -87 3 639 927 258 14 9 chr15 7196592 7196807 -96298167 + B3 SINE B2 1 216 0 3 639 431 328 39 43 chr15 7198317 7198524 -96296450 + LTR16A1 LTR ERVL 251 456 0 3 639 528 244 37 7 chr15 7200284 7200420 -96294554 - B4A SINE B4 0 292 153 3 639 207 273 76 25 chr15 7200468 7200547 -96294427 - MIRb SINE MIR -26 242 160 3 639 24 0 0 0 chr15 7201649 7201673 -96293301 + AT_rich Low_complexity Low_complexity 1 24 0 3 639 833 189 200 0 chr15 7201676 7201851 -96293123 - B3 SINE B2 -6 210 1 3 639 930 119 0 0 chr15 7202774 7202917 -96292057 + (TTCC)n Simple_repeat Simple_repeat 2 144 0 3 639 1229 42 0 0 chr15 7202919 7203061 -96291913 - B1_Mm SINE Alu -4 143 2 3 639 335 211 0 11 chr15 7204108 7204199 -96290775 + (CATATA)n Simple_repeat Simple_repeat 2 91 0 3 639 787 295 57 36 chr15 7205477 7205674 -96289300 + B4 SINE B4 4 196 -96 3 639 315 0 0 0 chr15 7205674 7205709 -96289265 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 639 787 295 57 36 chr15 7205709 7205792 -96289182 + B4 SINE B4 197 289 -3 3 639 249 33 0 0 chr15 7206599 7206629 -96288345 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 3 639 302 342 75 5 chr15 7207969 7208157 -96286817 + L1MEe LINE L1 785 985 -3869 3 639 499 267 226 4 chr15 7208226 7208452 -96286522 + B4 SINE B4 1 276 -16 3 639 481 273 0 0 chr15 7208551 7208650 -96286324 - B1F SINE Alu -50 99 1 3 640 26 64 0 0 chr15 7209095 7209142 -96285832 + AT_rich Low_complexity Low_complexity 1 47 0 3 640 610 207 26 0 chr15 7209185 7209301 -96285673 - B1F SINE Alu -30 119 1 3 640 725 307 33 0 chr15 7209398 7209668 -96285306 - B4A SINE B4 -12 280 2 3 640 1093 106 132 9 chr15 7209692 7209912 -96285062 - Lx9 LINE L1 -7 7637 7391 3 640 505 268 65 0 chr15 7209919 7210057 -96284917 - MER2 DNA MER2_type -65 280 134 3 640 513 269 36 124 chr15 7210290 7210515 -96284459 + RMER15 LTR ERVL 370 574 -1 3 640 278 333 185 17 chr15 7210515 7210634 -96284340 - MER2 DNA MER2_type -206 139 1 3 640 288 355 0 9 chr15 7211922 7212033 -96282941 + Charlie9 DNA MER1_type 1 110 -2647 3 640 840 186 0 0 chr15 7212112 7212279 -96282695 + (TG)n Simple_repeat Simple_repeat 1 167 0 3 640 195 69 0 0 chr15 7212830 7212859 -96282115 + (TC)n Simple_repeat Simple_repeat 1 29 0 3 640 405 0 0 0 chr15 7212956 7213001 -96281973 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 3 640 347 302 16 41 chr15 7213038 7213159 -96281815 + L2a LINE L2 3308 3425 -1 3 640 2074 188 35 8 chr15 7213204 7213575 -96281399 + MTC LTR MaLR 33 413 -8 3 640 637 305 42 31 chr15 7214774 7214967 -96280007 - MTE2b LTR MaLR -18 361 167 3 640 848 218 86 0 chr15 7214999 7215173 -96279801 - B3 SINE B2 -8 208 20 3 640 574 280 86 35 chr15 7215176 7215227 -96279747 - MTE2b LTR MaLR -196 183 138 3 640 2525 98 0 0 chr15 7215227 7215554 -96279420 + ORR1A2 LTR MaLR 1 327 0 3 640 574 280 86 35 chr15 7215554 7215676 -96279298 - MTE2b LTR MaLR -242 137 1 3 640 1465 300 77 20 chr15 7215857 7216404 -96278570 - Lx8 LINE L1 -312 7161 6584 3 640 1553 314 87 39 chr15 7216413 7217783 -96277191 - L1_Mur3 LINE L1 -2270 3610 2175 3 640 544 184 73 0 chr15 7217774 7217910 -96277064 - Lx9 LINE L1 -6 7638 7493 3 640 520 242 81 0 chr15 7217915 7218039 -96276935 + Lx9 LINE L1 7148 7281 -363 3 640 670 257 92 40 chr15 7218277 7218451 -96276523 + MTD LTR MaLR 19 201 -218 3 640 725 213 0 0 chr15 7218471 7218593 -96276381 - B3A SINE B2 -75 123 2 3 640 264 30 0 0 chr15 7219103 7219136 -96275838 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 640 980 53 68 8 chr15 7220978 7221110 -96273864 + B1_Mus2 SINE Alu 1 140 -7 3 640 396 55 0 0 chr15 7221111 7221166 -96273808 + (CAAAC)n Simple_repeat Simple_repeat 5 59 0 3 640 482 326 85 32 chr15 7221171 7221418 -96273556 + B4 SINE B4 27 286 -6 3 640 24 32 0 0 chr15 7221637 7221668 -96273306 + AT_rich Low_complexity Low_complexity 1 31 0 3 640 303 206 30 30 chr15 7222087 7222187 -96272787 + C-rich Low_complexity Low_complexity 3 102 0 3 640 1021 161 119 9 chr15 7222258 7222484 -96272490 - Lx5 LINE L1 0 7050 6800 3 640 709 172 0 11 chr15 7222815 7222997 -96271977 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 640 39008 38 2 3 chr15 7223464 7229698 -96265276 - L1Md_T LINE L1 0 6585 261 3 640 466 93 11 11 chr15 7229875 7229962 -96265012 + (TG)n Simple_repeat Simple_repeat 2 88 0 3 640 2112 163 44 11 chr15 7230585 7230951 -96264023 + ORR1C1 LTR MaLR 1 378 0 3 640 302 214 35 12 chr15 7232143 7232228 -96262746 + MER58B DNA MER1_type 117 203 -138 3 640 241 211 26 66 chr15 7232435 7232464 -96262510 - PB1D10 SINE Alu -3 114 87 3 640 941 223 42 5 chr15 7232464 7232676 -96262298 - ID_B1 SINE B4 -2 222 3 3 640 241 211 26 66 chr15 7232676 7232722 -96262252 - PB1D10 SINE Alu -31 86 42 3 640 1771 130 106 0 chr15 7234002 7234295 -96260679 - ORR1A3 LTR MaLR 0 326 3 3 640 198 267 0 103 chr15 7235186 7235303 -96259671 - L2a LINE L2 -297 3129 3025 3 640 357 186 0 0 chr15 7235454 7235524 -96259450 + (TA)n Simple_repeat Simple_repeat 1 70 0 3 640 261 301 0 12 chr15 7236154 7236238 -96258736 + L1MD2 LINE L1 5914 5996 -363 3 640 665 279 48 78 chr15 7237030 7237103 -96257871 + ID SINE ID 2 74 -150 3 640 1308 101 37 5 chr15 7237103 7237292 -96257682 + B2_Mm2 SINE B2 1 195 0 3 640 665 279 48 78 chr15 7237292 7237424 -96257550 + ID_B1 SINE B4 75 200 -24 3 640 210 71 0 0 chr15 7238948 7238976 -96255998 + (GGCTG)n Simple_repeat Simple_repeat 2 29 0 3 640 369 273 71 18 chr15 7239230 7239342 -96255632 - PB1D7 SINE Alu 0 120 3 3 640 185 83 28 0 chr15 7239384 7239420 -96255554 + (GGGTG)n Simple_repeat Simple_repeat 2 38 0 3 640 287 366 7 81 chr15 7240536 7240733 -96254241 + MIR SINE MIR 8 191 -71 3 640 533 238 25 80 chr15 7240851 7241052 -96253922 + MER33 DNA MER1_type 9 198 -126 3 640 72 32 0 0 chr15 7241067 7241160 -96253814 + AT_rich Low_complexity Low_complexity 1 93 0 3 640 733 193 179 17 chr15 7241202 7241381 -96253593 + B3 SINE B2 2 209 -7 3 640 225 0 0 0 chr15 7241611 7241636 -96253338 + (TGG)n Simple_repeat Simple_repeat 2 26 0 3 640 342 0 0 0 chr15 7241636 7241674 -96253300 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 640 245 303 65 113 chr15 7241686 7241872 -96253102 - MIR SINE MIR -2 260 84 3 640 468 0 0 0 chr15 7243820 7243872 -96251102 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 640 406 260 6 4 chr15 7243878 7243989 -96250985 - B3A SINE B2 -46 170 59 3 640 396 275 64 9 chr15 7244484 7244594 -96250380 - PB1D10 SINE Alu -1 116 1 3 640 1045 58 0 0 chr15 7244962 7245101 -96249873 + B1_Mus2 SINE Alu 9 147 0 3 640 393 290 130 0 chr15 7245251 7245382 -96249592 + MTEb LTR MaLR 5 152 -227 3 640 1070 206 18 88 chr15 7245489 7245761 -96249213 + MTEb LTR MaLR 127 379 0 3 640 825 132 0 0 chr15 7245826 7245993 -96248981 + (TC)n Simple_repeat Simple_repeat 2 168 0 3 640 471 18 0 0 chr15 7246209 7246265 -96248709 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 640 2208 147 40 10 chr15 7246485 7246885 -96248089 + MTC LTR MaLR 10 421 0 3 640 199 126 295 0 chr15 7246891 7246986 -96247988 + L3 LINE CR1 3639 3761 -728 4 640 1257 164 27 9 chr15 7247186 7247408 -96247566 - URR1A DNA MER1_type 0 226 1 4 640 429 20 0 0 chr15 7247831 7247881 -96247093 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 640 315 220 129 10 chr15 7249383 7249484 -96245490 - Charlie4a DNA MER1_type -4 504 392 4 640 592 275 12 18 chr15 7251114 7251277 -96243697 - RSINE1 SINE B4 -2 163 2 4 640 208 206 27 27 chr15 7252478 7252553 -96242421 + CT-rich Low_complexity Low_complexity 3 77 0 4 640 342 375 154 23 chr15 7252573 7253054 -96241920 + MLT1K LTR MaLR 29 572 -23 4 640 200 31 62 0 chr15 7254452 7254484 -96240490 + (TATG)n Simple_repeat Simple_repeat 1 34 0 4 640 919 157 144 20 chr15 7255279 7255480 -96239494 - URR1A DNA MER1_type 0 226 1 4 640 382 281 30 67 chr15 7255831 7255995 -96238979 - MER5A DNA MER1_type -4 185 28 4 640 572 158 12 0 chr15 7256812 7256977 -96237997 + (CAGAGA)n Simple_repeat Simple_repeat 4 170 0 4 640 188 67 33 0 chr15 7256990 7257020 -96237954 + (GA)n Simple_repeat Simple_repeat 2 32 0 4 640 251 167 0 55 chr15 7257062 7257189 -96237785 + (CAGA)n Simple_repeat Simple_repeat 1 120 0 4 640 351 0 0 0 chr15 7257189 7257228 -96237746 + (TC)n Simple_repeat Simple_repeat 1 39 0 4 640 216 0 0 0 chr15 7257228 7257251 -96237723 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 640 457 276 71 40 chr15 7257869 7258193 -96236781 + L2c LINE L2 2933 3266 -121 4 640 238 261 54 54 chr15 7258474 7258567 -96236407 + MLT1A1 LTR MaLR 44 136 -229 4 640 432 160 20 41 chr15 7258620 7258718 -96236256 + ID_B1 SINE B4 126 221 -3 4 640 219 186 0 23 chr15 7258727 7258771 -96236203 + GA-rich Low_complexity Low_complexity 1 43 0 4 640 457 221 75 41 chr15 7258863 7259009 -96235965 + MLT1A1 LTR MaLR 258 408 0 4 640 207 0 0 0 chr15 7259150 7259173 -96235801 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 4 640 1006 91 14 19 chr15 7259554 7259769 -96235205 + (TATATG)n Simple_repeat Simple_repeat 1 213 0 4 640 269 284 20 3 chr15 7261107 7261201 -96233773 - MIRb SINE MIR -76 192 90 4 640 326 391 86 5 chr15 7261441 7261662 -96233312 + MLT1J LTR MaLR 114 352 -160 4 640 360 0 0 0 chr15 7261730 7261770 -96233204 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 640 579 199 117 5 chr15 7262178 7262375 -96232599 + Charlie7a DNA MER1_type 37 255 -17 4 640 223 234 51 13 chr15 7263241 7263319 -96231655 - MIR SINE MIR -25 237 157 4 640 415 264 16 0 chr15 7263336 7263457 -96231517 - MER119 DNA MER1_type -2 581 459 4 640 298 366 0 16 chr15 7263619 7263744 -96231230 - RSINE1 SINE B4 -41 124 2 4 640 489 84 0 0 chr15 7263900 7263971 -96231003 + (TTGG)n Simple_repeat Simple_repeat 4 74 0 4 640 215 295 75 25 chr15 7264342 7264359 -96230615 - ID SINE ID -140 84 1 4 640 249 286 0 0 chr15 7264359 7264422 -96230552 - ID4_ SINE ID -20 63 1 4 640 247 299 25 33 chr15 7264460 7264581 -96230393 - ID_B1 SINE B4 -3 221 102 4 640 324 180 122 11 chr15 7264505 7264595 -96230379 - B1F1 SINE Alu -49 100 1 4 640 256 333 152 0 chr15 7265551 7265689 -96229285 + MIR SINE MIR 91 249 -13 4 640 1562 191 117 8 chr15 7266781 7267141 -96227833 + MTD LTR MaLR 13 411 -8 4 640 378 220 0 0 chr15 7268111 7268211 -96226763 + (CA)n Simple_repeat Simple_repeat 2 101 0 4 640 617 251 14 130 chr15 7268796 7269011 -96225963 + MTE2a LTR MaLR 1 190 -189 4 640 658 286 16 16 chr15 7268993 7269178 -96225796 + B3 SINE B2 8 192 -24 4 640 282 56 0 0 chr15 7269178 7269214 -96225760 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 4 640 617 239 170 0 chr15 7269222 7269381 -96225593 + MTE2a LTR MaLR 194 379 0 4 640 24 53 0 0 chr15 7269578 7269616 -96225358 + AT_rich Low_complexity Low_complexity 1 38 0 4 640 558 188 0 0 chr15 7269931 7270027 -96224947 + B1_Mur1 SINE Alu 41 136 -13 4 640 508 290 21 0 chr15 7271584 7271729 -96223245 + ORR1E LTR MaLR 1 148 -211 4 640 232 217 55 55 chr15 7271851 7271924 -96223050 + ORR1E LTR MaLR 298 370 -9 4 640 708 122 4 11 chr15 7271968 7272103 -96222871 + B2_Mm2 SINE B2 56 193 -2 4 640 382 206 19 81 chr15 7272216 7272388 -96222586 + MLT1A0 LTR MaLR 220 374 0 4 640 371 268 127 6 chr15 7272429 7272602 -96222372 + L1MC1 LINE L1 5341 5534 -799 4 640 265 291 0 81 chr15 7272639 7272725 -96222249 + PB1 SINE Alu 47 125 -2 4 640 1807 219 100 16 chr15 7272855 7273343 -96221631 + L1MC1 LINE L1 5525 6053 -280 4 640 489 301 88 79 chr15 7273354 7273478 -96221496 - MTEa LTR MaLR -41 338 211 4 640 585 0 0 0 chr15 7273478 7273543 -96221431 + (GA)n Simple_repeat Simple_repeat 1 65 0 4 640 489 301 88 79 chr15 7273543 7273746 -96221228 - MTEa LTR MaLR -169 210 8 4 640 831 268 38 19 chr15 7273751 7274017 -96220957 + L1MC1 LINE L1 6047 6317 -16 4 640 560 241 42 14 chr15 7274138 7274281 -96220693 + B1_Mur3 SINE Alu 2 148 -1 4 640 53 49 0 0 chr15 7274289 7274370 -96220604 + AT_rich Low_complexity Low_complexity 1 81 0 4 640 6662 55 11 0 chr15 7274427 7275243 -96219731 - L1Md_F2 LINE L1 0 6582 5758 4 640 818 65 53 12 chr15 7275739 7275909 -96219065 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 4 640 251 211 0 0 chr15 7275914 7275966 -96219008 + GA-rich Low_complexity Low_complexity 4 55 0 4 640 309 26 0 0 chr15 7276213 7276251 -96218723 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 640 189 0 0 0 chr15 7276753 7276774 -96218200 + (TCTCTG)n Simple_repeat Simple_repeat 2 22 0 4 640 227 152 38 12 chr15 7276774 7276854 -96218120 + RMER17C LTR ERVK 179 260 -150 4 640 402 39 0 0 chr15 7277115 7277167 -96217807 + (TTGG)n Simple_repeat Simple_repeat 2 53 0 4 640 180 0 0 0 chr15 7277167 7277187 -96217787 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 4 640 462 300 72 25 chr15 7277875 7278111 -96216863 + L1MD3 LINE L1 7741 7987 -8 4 640 180 250 77 15 chr15 7278629 7278694 -96216280 + L2 LINE L2 201 269 -3150 4 640 469 244 139 55 chr15 7279133 7279278 -96215696 + B3A SINE B2 1 164 -34 4 640 576 125 0 0 chr15 7279278 7279374 -96215600 + (CA)n Simple_repeat Simple_repeat 1 96 0 4 640 331 244 139 55 chr15 7279374 7279393 -96215581 + B2_Mm1t SINE B2 164 179 -14 4 640 553 27 27 0 chr15 7279718 7279793 -96215181 + (GA)n Simple_repeat Simple_repeat 1 77 0 4 640 771 149 19 0 chr15 7280139 7280293 -96214681 + T-rich Low_complexity Low_complexity 3 159 0 4 640 462 149 0 0 chr15 7282614 7282701 -96212273 + (CA)n Simple_repeat Simple_repeat 2 88 0 4 640 309 292 93 9 chr15 7282810 7282917 -96212057 - RMER30 DNA MER1_type -1 201 86 4 640 199 261 75 54 chr15 7283146 7283239 -96211735 + L2a LINE L2 3304 3398 -28 4 640 289 230 10 10 chr15 7283548 7283649 -96211325 + CT-rich Low_complexity Low_complexity 6 106 0 4 640 299 222 0 49 chr15 7284174 7284275 -96210699 - MLT1A0 LTR MaLR 0 408 269 4 640 344 347 8 0 chr15 7284345 7284466 -96210508 - MLT1A0 LTR MaLR -223 142 21 4 640 829 258 57 31 chr15 7284567 7284919 -96210055 + L1MC4a LINE L1 7488 7848 -34 4 640 529 320 28 31 chr15 7285111 7285366 -96209608 + Lx8 LINE L1 7143 7396 -77 4 640 707 188 26 77 chr15 7285688 7285844 -96209130 - B1_Mur1 SINE Alu 0 149 2 4 640 218 361 0 0 chr15 7285993 7286065 -96208909 + C-rich Low_complexity Low_complexity 5 76 0 4 640 189 0 0 0 chr15 7287301 7287322 -96207652 + (CAAAAA)n Simple_repeat Simple_repeat 1 21 0 4 640 271 345 9 0 chr15 7287992 7288102 -96206872 - MLT1I LTR MaLR -213 198 88 4 640 383 315 82 48 chr15 7288450 7288720 -96206254 + L1M5 LINE L1 4757 5035 -1111 4 640 429 259 93 0 chr15 7289122 7289261 -96205713 + RSINE1 SINE B4 4 155 -10 4 640 609 212 13 70 chr15 7289295 7289452 -96205522 - B1_Mur1 SINE Alu -1 148 1 4 640 309 292 25 42 chr15 7289607 7289725 -96205249 - PB1D10 SINE Alu -1 116 1 4 640 204 281 25 44 chr15 7290165 7290325 -96204649 + (CATATA)n Simple_repeat Simple_repeat 5 161 0 4 640 411 153 31 0 chr15 7290442 7290540 -96204434 + (TA)n Simple_repeat Simple_repeat 2 102 0 4 640 336 306 111 8 chr15 7291001 7291187 -96203787 - MIR SINE MIR -65 203 4 4 640 922 270 67 20 chr15 7291431 7291805 -96203169 + L1MA8 LINE L1 5679 6067 -224 4 640 416 204 0 26 chr15 7292936 7293052 -96201922 + (CACCAT)n Simple_repeat Simple_repeat 4 116 0 4 640 210 355 25 25 chr15 7293081 7293162 -96201812 - ID4 SINE ID -2 81 1 4 640 21 0 0 0 chr15 7293205 7293226 -96201748 + AT_rich Low_complexity Low_complexity 1 21 0 4 640 377 353 45 52 chr15 7293737 7294024 -96200950 - MLT1G1 LTR MaLR -3 576 292 4 640 375 289 63 99 chr15 7294691 7295025 -96199949 - Lx9 LINE L1 -15 7629 7308 4 640 229 260 105 49 chr15 7295183 7295345 -96199629 - HAL1 LINE L1 -1809 698 528 4 640 487 328 48 73 chr15 7295872 7296227 -96198747 + ORR1E LTR MaLR 10 355 -4 4 640 3300 83 7 2 chr15 7296528 7297100 -96197874 - L1_Mus1 LINE L1 -593 5974 5395 4 640 4501 42 2 2 chr15 7297100 7297642 -96197332 + L1_Mus1 LINE L1 6026 6567 0 4 640 1290 230 47 80 chr15 7299236 7299623 -96195351 - MTE2a LTR MaLR -5 374 1 4 640 4791 40 28 0 chr15 7299673 7300244 -96194730 + LTRIS_Mus LTR ERV1 1 587 0 4 640 647 327 24 24 chr15 7300276 7300605 -96194369 + L2 LINE L2 2430 2758 -661 4 640 630 227 61 111 chr15 7301776 7301944 -96193030 + B3A SINE B2 1 167 -28 4 640 771 64 0 0 chr15 7301944 7302054 -96192920 + (CA)n Simple_repeat Simple_repeat 2 111 0 4 640 420 227 61 111 chr15 7302054 7302083 -96192891 + B2_Mm2 SINE B2 168 188 -7 4 640 910 263 23 5 chr15 7302122 7302340 -96192634 + ID_B1 SINE B4 3 224 0 4 640 5110 192 18 21 chr15 7303340 7304300 -96190674 + Lx6 LINE L1 6160 7116 -344 4 640 575 130 10 0 chr15 7304300 7304400 -96190574 + (TC)n Simple_repeat Simple_repeat 2 102 0 4 640 337 222 0 0 chr15 7304407 7304479 -96190495 + Lx6 LINE L1 7115 7186 -274 4 640 382 172 23 0 chr15 7304479 7304566 -96190408 + (TGAG)n Simple_repeat Simple_repeat 1 89 0 4 640 1697 76 82 131 chr15 7304567 7304921 -96190053 + ORR1A2 LTR MaLR 1 320 -7 5 640 2571 73 0 15 chr15 7304921 7305253 -96189721 + ORR1A2 LTR MaLR 1 327 0 5 640 10650 146 56 13 chr15 7305261 7305916 -96189058 + ORR1A2-int LTR MaLR 1 723 -1240 5 640 180 0 0 0 chr15 7305916 7305936 -96189038 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5 640 10650 146 56 13 chr15 7305936 7307161 -96187813 + ORR1A2-int LTR MaLR 724 1962 -1 5 640 2567 71 6 0 chr15 7307161 7307484 -96187490 + ORR1A2 LTR MaLR 1 325 -2 5 640 1090 237 66 4 chr15 7307485 7307743 -96187231 + Lx6 LINE L1 7177 7450 -10 4 640 1090 283 56 46 chr15 7308291 7308791 -96186183 - L1MC4a LINE L1 -287 7595 7091 5 640 281 289 68 40 chr15 7308853 7309001 -96185973 - MTEa LTR MaLR -25 354 203 5 640 387 0 0 0 chr15 7309157 7309200 -96185774 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 640 405 0 0 0 chr15 7309200 7309244 -96185730 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 640 198 0 0 0 chr15 7309341 7309363 -96185611 + (CAT)n Simple_repeat Simple_repeat 2 23 0 5 640 640 108 36 0 chr15 7309575 7309714 -96185260 + (CA)n Simple_repeat Simple_repeat 2 145 0 5 640 435 307 75 38 chr15 7309775 7309961 -96185013 - LTR90A LTR LTR -702 274 82 5 640 201 74 0 0 chr15 7310385 7310412 -96184562 + (T)n Simple_repeat Simple_repeat 1 27 0 5 640 322 47 0 0 chr15 7310412 7310455 -96184519 + ORR1A1-int LTR MaLR 352 394 -1398 5 640 41923 11 2 6 chr15 7310459 7317272 -96177702 - L1Md_A LINE L1 0 6582 1 5 640 2391 55 31 52 chr15 7317299 7317626 -96177348 - ORR1A2 LTR MaLR -3 324 5 5 640 492 18 0 0 chr15 7318082 7318139 -96176835 + (TAGA)n Simple_repeat Simple_repeat 3 59 0 5 640 246 331 31 24 chr15 7318325 7318452 -96176522 + MLT1H LTR MaLR 419 546 -3 5 640 266 272 43 0 chr15 7318497 7318589 -96176385 - MamRep137 DNA TcMar? -57 387 292 5 640 717 182 8 0 chr15 7320822 7320948 -96174026 - B1_Mus1 SINE Alu -20 128 2 5 640 797 192 20 27 chr15 7320994 7321144 -96173830 + B1_Mur1 SINE Alu 1 149 0 5 640 208 143 0 0 chr15 7321282 7321317 -96173657 + (A)n Simple_repeat Simple_repeat 1 35 0 5 640 1031 182 62 62 chr15 7322046 7322370 -96172604 + MTD LTR MaLR 10 419 0 5 640 266 300 32 43 chr15 7323631 7323725 -96171249 - MIRb SINE MIR -83 185 93 5 640 459 0 0 0 chr15 7324872 7324923 -96170051 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 640 1467 188 53 71 chr15 7325083 7325461 -96169513 + ORR1C1 LTR MaLR 3 373 -5 5 640 830 255 78 0 chr15 7326201 7326393 -96168581 + B3 SINE B2 2 208 -8 5 640 675 0 0 0 chr15 7326575 7326650 -96168324 + (TTCCC)n Simple_repeat Simple_repeat 1 75 0 5 640 999 48 0 0 chr15 7326650 7326775 -96168199 + (TTTC)n Simple_repeat Simple_repeat 1 125 0 5 640 578 284 9 56 chr15 7327085 7327316 -96167658 + MER58A DNA MER1_type 1 220 -4 5 640 197 239 0 0 chr15 7328035 7328081 -96166893 + MIR SINE MIR 217 262 0 5 640 208 238 0 0 chr15 7328471 7328513 -96166461 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 640 713 301 23 61 chr15 7328514 7328776 -96166198 - MER44B DNA MER2_type -130 420 169 5 640 333 0 0 0 chr15 7329517 7329554 -96165420 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 640 356 155 402 0 chr15 7329998 7330095 -96164879 - URR1A DNA MER1_type -86 140 5 5 640 311 229 66 138 chr15 7330230 7330397 -96164577 + MER53 DNA hAT 7 161 -32 5 640 467 173 45 18 chr15 7330522 7330634 -96164340 - L1MB1 LINE L1 0 6168 6054 5 640 573 254 49 7 chr15 7331364 7331507 -96163467 + B4A SINE B4 1 149 -143 5 640 645 216 122 25 chr15 7331578 7331644 -96163330 - L1ME2z LINE L1 -4 6440 6374 5 640 583 103 10 10 chr15 7331644 7331742 -96163232 + (TA)n Simple_repeat Simple_repeat 2 99 0 5 640 645 216 122 25 chr15 7331742 7331879 -96163095 - L1ME2z LINE L1 -71 6373 6218 5 640 465 294 15 0 chr15 7333435 7333571 -96161403 + ID_B1 SINE B4 80 217 -7 5 640 610 299 43 5 chr15 7333618 7333803 -96161171 + B3A SINE B2 2 193 -5 5 640 656 246 57 47 chr15 7335523 7335715 -96159259 - B4A SINE B4 -98 194 1 5 640 799 160 192 31 chr15 7335735 7335928 -96159046 + URR1B DNA MER1_type 1 224 -1 5 640 310 239 35 35 chr15 7336551 7336664 -96158310 + MLT1A LTR MaLR 59 171 -203 5 640 233 293 13 13 chr15 7337057 7337133 -96157841 + MLT1J2 LTR MaLR 44 119 -329 5 640 865 159 0 0 chr15 7337478 7337623 -96157351 - B1_Mur4 SINE Alu -1 149 5 5 640 240 333 40 0 chr15 7337707 7337782 -96157192 - LTR82B Low_complexity ERVL -446 384 307 5 640 302 287 26 53 chr15 7337860 7337974 -96157000 - PB1D10 SINE Alu 0 117 7 5 640 246 310 11 11 chr15 7338016 7338104 -96156870 - LTR82B Low_complexity ERVL -631 199 112 5 640 465 103 0 0 chr15 7339320 7339388 -96155586 + (TA)n Simple_repeat Simple_repeat 2 69 0 5 640 959 96 14 7 chr15 7339388 7339535 -96155439 - L1_Mus3 LINE L1 -37 6601 6454 5 641 350 57 19 0 chr15 7342667 7342720 -96152254 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 641 878 323 17 10 chr15 7342923 7343211 -96151763 + B4 SINE B4 2 291 -1 5 641 324 0 0 0 chr15 7343220 7343256 -96151718 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 641 348 229 93 56 chr15 7343291 7343541 -96151433 + L1ME1 LINE L1 5224 5482 -697 5 641 561 239 87 143 chr15 7343568 7343924 -96151050 + MTE2a LTR MaLR 5 340 -39 5 641 853 285 95 30 chr15 7343983 7344456 -96150518 + L1ME1 LINE L1 5477 5987 -192 5 641 375 388 49 4 chr15 7345331 7345556 -96149418 + MIR SINE MIR 28 262 0 5 641 306 308 0 45 chr15 7350113 7350225 -96144749 - MIR SINE MIR -74 188 82 5 641 226 327 29 29 chr15 7350475 7350579 -96144395 - B1F1 SINE Alu -45 104 1 5 641 310 278 110 26 chr15 7352431 7352586 -96142388 + MLT1B LTR MaLR 3 170 -220 5 641 262 289 229 0 chr15 7352585 7352668 -96142306 + B1F2 SINE Alu 17 118 -31 5 641 1300 20 0 0 chr15 7352704 7352851 -96142123 + B1_Mus2 SINE Alu 1 147 0 5 641 460 194 7 7 chr15 7352877 7353012 -96141962 + GA-rich Low_complexity Low_complexity 2 136 0 5 641 302 164 0 90 chr15 7353148 7353215 -96141759 + MLT1C LTR MaLR 407 467 0 5 641 396 254 68 0 chr15 7353297 7353415 -96141559 - L1M5 LINE L1 -1017 5129 5004 5 641 303 360 15 0 chr15 7354744 7354880 -96140094 + MIR3 SINE MIR 30 167 -41 5 641 732 283 98 25 chr15 7355457 7355772 -96139202 + MER2 DNA MER2_type 1 338 -7 5 641 277 194 83 0 chr15 7357940 7358012 -96136962 + L1MB1 LINE L1 5684 5761 -407 5 641 328 125 24 24 chr15 7358031 7358113 -96136861 + (TCTCTG)n Simple_repeat Simple_repeat 3 84 0 5 641 729 258 130 40 chr15 7358170 7358407 -96136567 + L1MB1 LINE L1 5793 6060 -108 5 641 1054 146 130 5 chr15 7358407 7358607 -96136367 + URR1A DNA MER1_type 1 225 -1 5 641 729 258 130 40 chr15 7358607 7358668 -96136306 + L1MB1 LINE L1 6061 6118 -50 5 641 205 29 0 56 chr15 7360681 7360717 -96134257 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 641 258 253 13 0 chr15 7360865 7360940 -96134034 - MER5A1 DNA MER1_type -36 130 55 5 641 610 245 9 2 chr15 7361241 7361378 -96133596 + B1F2 SINE Alu 7 144 -5 5 641 185 286 11 0 chr15 7361388 7361479 -96133495 + GA-rich Low_complexity Low_complexity 5 96 0 5 641 289 203 31 0 chr15 7361613 7361677 -96133297 + B4 SINE B4 9 74 -218 5 641 577 69 11 11 chr15 7361677 7361765 -96133209 + (GAAAA)n Simple_repeat Simple_repeat 5 92 0 5 641 585 169 0 0 chr15 7361781 7361917 -96133057 + (CA)n Simple_repeat Simple_repeat 1 136 0 5 641 547 178 0 75 chr15 7362008 7362154 -96132820 + Lx6 LINE L1 7325 7459 -1 5 641 229 336 54 39 chr15 7362312 7362442 -96132532 + MIR SINE MIR 26 157 -105 5 641 608 190 19 31 chr15 7362654 7362790 -96132184 + RSINE1 SINE B4 19 153 -12 5 641 285 51 0 0 chr15 7362790 7362829 -96132145 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 641 1451 120 91 118 chr15 7362984 7363314 -96131660 - ORR1A4 LTR MaLR -8 321 1 5 641 1022 204 138 95 chr15 7363446 7363858 -96131116 + RLTR20C LTR ERVK 1 430 -104 5 641 552 77 0 0 chr15 7363858 7363936 -96131038 + (GA)n Simple_repeat Simple_repeat 1 78 0 5 641 335 235 55 66 chr15 7363936 7364027 -96130947 + RLTR20C LTR ERVK 452 541 0 5 641 387 0 0 0 chr15 7365086 7365129 -96129845 + (TTA)n Simple_repeat Simple_repeat 3 45 0 5 641 472 257 10 0 chr15 7365167 7365268 -96129706 - RSINE1 SINE B4 -61 104 3 5 641 449 296 0 25 chr15 7366348 7366466 -96128508 - MER58A DNA MER1_type -109 115 1 5 641 293 190 0 0 chr15 7368208 7368266 -96126708 + MTEa LTR MaLR 1 58 -321 5 641 241 258 0 43 chr15 7368266 7368277 -96126697 + MT2A LTR ERVL 1 66 -467 5 641 609 180 0 0 chr15 7368282 7368393 -96126581 + B1_Mur4 SINE Alu 9 119 -31 5 641 348 24 0 0 chr15 7368422 7368463 -96126511 + (GGA)n Simple_repeat Simple_repeat 3 43 0 5 641 690 150 0 0 chr15 7368463 7368630 -96126344 + (CAA)n Simple_repeat Simple_repeat 2 168 0 5 641 180 170 0 0 chr15 7368649 7368702 -96126272 + (CAA)n Simple_repeat Simple_repeat 2 54 0 5 641 637 185 0 26 chr15 7368701 7368856 -96126118 + GA-rich Low_complexity Low_complexity 3 153 0 5 641 709 280 65 76 chr15 7368866 7369156 -96125818 + MTEa LTR MaLR 59 345 -34 5 641 195 304 3 30 chr15 7369199 7369278 -96125696 - MIRc SINE MIR -159 109 32 5 641 948 146 0 0 chr15 7369474 7369652 -96125322 + (TTC)n Simple_repeat Simple_repeat 2 179 0 5 641 1176 70 0 0 chr15 7369658 7369800 -96125174 - B1_Mus1 SINE Alu -6 142 1 5 641 29 28 0 0 chr15 7369936 7369972 -96125002 + AT_rich Low_complexity Low_complexity 1 36 0 5 641 428 276 160 14 chr15 7370050 7370263 -96124711 + L1MC4a LINE L1 5712 5955 -1927 5 641 442 295 136 18 chr15 7371323 7371603 -96123371 - Charlie4a DNA MER1_type -177 331 19 5 641 454 297 56 64 chr15 7371664 7371898 -96123076 - MLT1J2 LTR MaLR -213 235 4 5 641 538 277 98 104 chr15 7374678 7374771 -96120203 + L1_Mur3 LINE L1 886 994 -6734 5 641 225 0 0 0 chr15 7374771 7374796 -96120178 + (TA)n Simple_repeat Simple_repeat 1 25 0 6 641 8741 247 61 63 chr15 7374796 7375399 -96119575 + L1_Mur3 LINE L1 995 1592 -4288 5 641 499 254 92 0 chr15 7375399 7375529 -96119445 + B1_Mur2 SINE Alu 2 143 -6 6 641 8741 221 27 25 chr15 7375529 7376011 -96118963 + L1_Mur3 LINE L1 1593 2070 -3810 5 641 288 77 0 0 chr15 7376011 7376050 -96118924 + (CCA)n Simple_repeat Simple_repeat 3 41 0 6 641 8741 221 27 25 chr15 7376050 7377427 -96117547 + L1_Mur3 LINE L1 2071 3444 -2436 5 641 1137 149 9 71 chr15 7377427 7377651 -96117323 - URR1A DNA MER1_type 0 226 17 6 641 1239 179 38 4 chr15 7377651 7377914 -96117060 + L1_Mur3 LINE L1 3438 3709 -2171 5 641 600 258 6 41 chr15 7377905 7378075 -96116899 + Lx7 LINE L1 6272 6435 -1261 6 641 531 290 0 0 chr15 7378081 7378212 -96116762 - Lx7 LINE L1 -807 6889 6759 6 641 1415 251 73 19 chr15 7378211 7378621 -96116353 + Lx7 LINE L1 6890 7321 -375 6 641 228 227 0 0 chr15 7378628 7378672 -96116302 - B2_Mm2 SINE B2 -121 74 31 6 641 288 0 0 0 chr15 7378810 7378842 -96116132 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 641 460 259 97 14 chr15 7378847 7378992 -96115982 - B3A SINE B2 -38 160 4 6 641 2225 166 12 17 chr15 7379205 7379622 -96115352 - MTC LTR MaLR -6 415 1 6 641 182 271 174 12 chr15 7380850 7380936 -96114038 - MIRb SINE MIR -57 211 112 6 641 779 162 129 121 chr15 7380939 7381163 -96113811 + URR1A DNA MER1_type 1 226 0 6 641 290 80 20 0 chr15 7381437 7381487 -96113487 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 641 513 0 0 0 chr15 7381487 7381543 -96113431 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 641 623 211 155 0 chr15 7381543 7381685 -96113289 - ORR1D1 LTR MaLR -210 164 1 6 641 509 270 0 16 chr15 7381991 7382119 -96112855 + B1_Mur1 SINE Alu 3 128 -21 6 641 204 40 0 0 chr15 7382129 7382154 -96112820 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 6 641 305 352 0 9 chr15 7382204 7382310 -96112664 + PB1D10 SINE Alu 1 105 -12 6 641 279 357 37 75 chr15 7382589 7382755 -96112219 - MLT1G3 LTR MaLR -313 282 80 6 641 1060 247 115 6 chr15 7382761 7383091 -96111883 + ORR1D2 LTR MaLR 1 366 -4 6 641 367 257 46 37 chr15 7383129 7383238 -96111736 + ID_B1 SINE B4 99 208 -16 6 641 888 291 39 53 chr15 7386892 7387175 -96107799 - B4 SINE B4 -4 288 10 6 641 1121 63 28 0 chr15 7387260 7387402 -96107572 + B1_Mm SINE Alu 1 146 -1 6 641 432 327 86 52 chr15 7387505 7387758 -96107216 + MLT1A0 LTR MaLR 64 331 -34 6 641 2264 136 161 46 chr15 7387758 7388236 -96106738 + RMER16 LTR ERVK 1 533 0 6 641 432 327 86 52 chr15 7388236 7388272 -96106702 + MLT1A0 LTR MaLR 332 363 -2 6 641 471 299 153 45 chr15 7389926 7390259 -96104715 - MTD LTR MaLR -44 375 7 6 641 274 325 73 73 chr15 7390284 7390463 -96104511 - MLT1I LTR MaLR -144 267 89 6 641 1075 292 25 31 chr15 7390855 7391212 -96103762 + MTEb LTR MaLR 24 378 -1 6 641 266 79 0 0 chr15 7391216 7391254 -96103720 + ORR1A4 LTR MaLR 1 38 -291 6 641 377 302 71 0 chr15 7391248 7391374 -96103600 - MER58A DNA MER1_type -72 152 18 6 641 246 290 126 30 chr15 7391598 7391733 -96103241 - L2a LINE L2 -96 3330 3183 6 641 424 291 41 28 chr15 7391920 7392065 -96102909 - RSINE1 SINE B4 -2 163 17 6 641 273 140 0 0 chr15 7392133 7392190 -96102784 + (TC)n Simple_repeat Simple_repeat 2 58 0 6 641 355 292 9 0 chr15 7393206 7393319 -96101655 - MER5A1 DNA MER1_type -2 164 51 6 641 380 270 8 146 chr15 7393397 7393644 -96101330 - ID_B1 SINE B4 -7 217 5 6 641 654 309 29 43 chr15 7394060 7394341 -96100633 - B4A SINE B4 0 292 16 6 641 288 0 0 0 chr15 7394341 7394373 -96100601 + (TC)n Simple_repeat Simple_repeat 2 33 0 6 641 303 247 27 27 chr15 7394600 7394675 -96100299 - ID4_ SINE ID -7 76 2 6 641 279 360 0 0 chr15 7394691 7394780 -96100194 - B1F SINE Alu -7 142 54 6 641 630 311 58 29 chr15 7394985 7395263 -96099711 - MT2A LTR ERVL -78 455 170 6 641 803 187 21 54 chr15 7395862 7396072 -96098902 + MTC LTR MaLR 178 413 -8 6 641 226 316 17 26 chr15 7396565 7396682 -96098292 + GA-rich Low_complexity Low_complexity 3 118 0 6 641 302 238 0 36 chr15 7396777 7396860 -96098114 + CT-rich Low_complexity Low_complexity 1 80 0 6 641 384 22 0 0 chr15 7397407 7397452 -96097522 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 641 551 274 97 7 chr15 7399454 7399608 -96095366 + ORR1D1 LTR MaLR 22 189 -185 6 641 282 188 51 0 chr15 7399611 7399728 -96095246 + (TCTG)n Simple_repeat Simple_repeat 2 124 0 6 641 999 190 19 0 chr15 7399737 7399942 -96095032 + ORR1D1 LTR MaLR 166 374 0 6 641 349 247 0 45 chr15 7400747 7400836 -96094138 + PB1D10 SINE Alu 33 117 0 6 641 529 282 0 0 chr15 7401330 7401454 -96093520 - B1F1 SINE Alu 0 149 26 6 641 926 288 73 29 chr15 7401462 7401805 -96093169 - MTE2b LTR MaLR 0 379 22 6 641 650 288 69 74 chr15 7403452 7403816 -96091158 + MTEa LTR MaLR 1 362 -17 6 641 274 96 58 0 chr15 7403825 7403877 -96091097 + Lx9 LINE L1 7590 7644 0 6 641 274 256 42 62 chr15 7403898 7403994 -96090980 + B4 SINE B4 2 95 -197 6 641 231 351 0 0 chr15 7404579 7404656 -96090318 - MIR SINE MIR -55 207 131 6 641 222 67 67 0 chr15 7404741 7404786 -96090188 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 6 641 2135 167 25 10 chr15 7405274 7405679 -96089295 + MTC LTR MaLR 1 411 -10 6 641 5832 15 0 6 chr15 7406458 7407124 -96087850 + L1Md_F2 LINE L1 4924 5585 -298 6 641 8338 42 2 1 chr15 7407125 7408119 -96086855 + L1Md_F2 LINE L1 5587 6581 -1 6 641 186 43 0 0 chr15 7410166 7410189 -96084785 + (TGGGGG)n Simple_repeat Simple_repeat 1 23 0 6 641 287 250 42 69 chr15 7412506 7412696 -96082278 - MIRb SINE MIR -70 198 12 6 641 325 267 167 26 chr15 7412696 7412888 -96082086 + AmnSINE1 SINE SINE 347 565 -10 6 641 567 0 0 0 chr15 7413010 7413073 -96081901 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 6 641 418 235 28 56 chr15 7414401 7414509 -96080465 + PB1 SINE Alu 21 125 -2 6 641 232 309 0 0 chr15 7414513 7414581 -96080393 + ID4 SINE ID 4 71 -12 6 641 261 118 0 0 chr15 7414803 7414854 -96080120 + (T)n Simple_repeat Simple_repeat 1 51 0 6 641 267 47 0 122 chr15 7414854 7414903 -96080071 - B1_Mus2 SINE Alu -88 59 17 6 641 241 271 71 0 chr15 7414925 7414995 -96079979 + MIRb SINE MIR 53 127 -141 6 641 202 143 51 51 chr15 7415083 7415142 -96079832 + (TTGGGG)n Simple_repeat Simple_repeat 1 59 0 6 641 1507 307 108 23 chr15 7415569 7416420 -96078554 - L1MB2 LINE L1 -96 6075 5119 6 641 537 16 0 0 chr15 7416420 7416482 -96078492 + (TG)n Simple_repeat Simple_repeat 2 63 0 6 641 1507 282 126 21 chr15 7416482 7417048 -96077926 - L1MB2 LINE L1 -1022 5118 4509 6 641 513 0 0 0 chr15 7417049 7417106 -96077868 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 641 325 326 82 0 chr15 7417116 7417263 -96077711 - RSINE1 SINE B4 0 165 7 6 641 368 282 20 112 chr15 7417269 7417660 -96077314 - L1MB2 LINE L1 -1637 4503 4149 6 641 288 0 0 0 chr15 7417790 7417822 -96077152 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 641 2422 307 37 12 chr15 7417859 7418674 -96076300 - Lx8 LINE L1 -199 7274 6440 6 641 369 0 0 0 chr15 7418680 7418721 -96076253 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 641 621 230 20 7 chr15 7418727 7418876 -96076098 - B3 SINE B2 -65 151 1 6 641 486 261 0 76 chr15 7418878 7419023 -96075951 - Lx8 LINE L1 -1036 6437 6304 6 641 1750 252 113 23 chr15 7419028 7419592 -96075382 - Lx8 LINE L1 -237 5643 5029 6 641 441 0 0 0 chr15 7420377 7420426 -96074548 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 641 380 274 82 12 chr15 7420927 7421093 -96073881 + MIR SINE MIR 52 222 -40 6 641 465 19 0 0 chr15 7421286 7421340 -96073634 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 6 641 225 310 32 2 chr15 7421470 7421582 -96073392 + MIR SINE MIR 9 127 -141 6 641 272 303 101 56 chr15 7421679 7421986 -96072988 + MTEa LTR MaLR 48 373 -6 6 641 773 257 43 102 chr15 7422545 7422601 -96072373 - B4A SINE B4 -7 285 232 6 641 1019 102 17 6 chr15 7422601 7422779 -96072195 + (TTC)n Simple_repeat Simple_repeat 1 180 0 6 641 773 257 43 102 chr15 7422779 7423025 -96071949 - B4A SINE B4 -61 231 1 6 641 1045 250 68 109 chr15 7423049 7423444 -96071530 + MTE2a LTR MaLR 1 379 0 6 641 437 0 19 0 chr15 7425784 7425837 -96069137 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 641 3949 160 86 66 chr15 7427296 7428180 -96066794 + RMER19B LTR ERVK 1 902 0 6 641 232 270 33 11 chr15 7428830 7428920 -96066054 + L2a LINE L2 3222 3313 -113 6 641 859 263 71 4 chr15 7428977 7429244 -96065730 - B4 SINE B4 0 292 8 6 641 736 208 0 14 chr15 7432914 7433024 -96061950 - RMER1C Other Other 0 1342 1235 6 641 510 61 0 0 chr15 7433024 7433090 -96061884 + (GGA)n Simple_repeat Simple_repeat 3 68 0 6 641 736 208 0 14 chr15 7433090 7433125 -96061849 - RMER1C Other Other -108 1234 1200 6 641 539 240 7 0 chr15 7433129 7433275 -96061699 + GA-rich Low_complexity Low_complexity 2 148 0 6 641 1307 176 4 25 chr15 7433280 7433524 -96061450 - RMER1C Other Other -117 1225 987 6 641 625 238 113 0 chr15 7434514 7434682 -96060292 + ID_B1 SINE B4 21 207 -17 6 641 690 75 0 0 chr15 7434682 7434775 -96060199 + (GA)n Simple_repeat Simple_repeat 1 93 0 6 641 369 93 0 0 chr15 7434812 7434866 -96060108 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 641 483 297 73 11 chr15 7435069 7435246 -96059728 - MIRb SINE MIR -56 212 25 6 641 294 50 0 0 chr15 7435474 7435514 -96059460 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 641 303 191 0 0 chr15 7435515 7435578 -96059396 + G-rich Low_complexity Low_complexity 2 64 0 6 641 1128 128 0 0 chr15 7435592 7435771 -96059203 + (GGAGA)n Simple_repeat Simple_repeat 2 180 0 6 641 531 0 0 0 chr15 7435774 7435833 -96059141 + (GAGAA)n Simple_repeat Simple_repeat 1 59 0 6 641 763 246 292 14 chr15 7436170 7436457 -96058517 - MTE2b LTR MaLR -12 367 1 6 641 764 21 0 11 chr15 7436627 7436722 -96058252 + (CTA)n Simple_repeat Simple_repeat 1 94 0 6 641 213 39 0 0 chr15 7436867 7436893 -96058081 + (AGGTG)n Simple_repeat Simple_repeat 1 26 0 6 641 24 0 0 0 chr15 7437132 7437156 -96057818 + AT_rich Low_complexity Low_complexity 1 24 0 6 641 834 319 126 62 chr15 7437852 7438607 -96056367 - L1MEf LINE L1 -4195 2005 1212 7 641 225 0 0 0 chr15 7438607 7438632 -96056342 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 7 641 834 296 143 52 chr15 7438632 7439643 -96055331 - L1MEf LINE L1 -4989 1211 92 7 641 306 293 0 0 chr15 7440690 7440772 -96054202 + ID4 SINE ID 2 83 0 7 641 373 343 29 0 chr15 7441058 7441195 -96053779 + MLT1D LTR MaLR 2 142 -363 7 641 235 259 0 17 chr15 7441693 7441752 -96053222 + (TCTA)n Simple_repeat Simple_repeat 2 59 0 7 641 310 318 24 15 chr15 7442026 7442196 -96052778 + MLT1D LTR MaLR 276 480 -25 7 641 241 200 20 0 chr15 7444954 7445004 -96049970 + (CATATA)n Simple_repeat Simple_repeat 6 56 0 7 641 560 296 39 74 chr15 7445791 7446021 -96048953 + ID_B1 SINE B4 3 224 0 7 641 1458 75 0 0 chr15 7446046 7446285 -96048689 + (GTATG)n Simple_repeat Simple_repeat 1 239 0 7 641 701 294 52 20 chr15 7448727 7449032 -96045942 + MER33 DNA MER1_type 5 319 -5 7 641 799 209 18 70 chr15 7450057 7450284 -96044690 + B3 SINE B2 1 215 -1 7 641 257 330 60 80 chr15 7450361 7450611 -96044363 + MLT1J LTR MaLR 233 477 -35 7 641 396 267 76 0 chr15 7450654 7450759 -96044215 - PB1D10 SINE Alu 0 117 5 7 641 690 172 0 0 chr15 7451382 7451510 -96043464 + CT-rich Low_complexity Low_complexity 1 128 0 7 641 4306 129 28 2 chr15 7452032 7452666 -96042308 + Lx4A LINE L1 6407 7057 -1 7 641 315 105 0 0 chr15 7452667 7452724 -96042250 + (A)n Simple_repeat Simple_repeat 1 57 0 7 641 277 349 47 0 chr15 7452842 7452971 -96042003 + MIR SINE MIR 88 222 -40 7 641 763 259 71 87 chr15 7453113 7453379 -96041595 - MTEa LTR MaLR -117 262 1 7 641 315 0 0 0 chr15 7454848 7454883 -96040091 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 641 267 79 0 0 chr15 7454883 7454920 -96040054 + (TA)n Simple_repeat Simple_repeat 2 39 0 7 641 245 186 0 14 chr15 7455219 7455290 -96039684 + CT-rich Low_complexity Low_complexity 2 71 0 7 641 584 303 60 77 chr15 7456161 7456445 -96038529 + B4 SINE B4 1 271 -21 7 641 21 0 0 0 chr15 7456476 7456497 -96038477 + AT_rich Low_complexity Low_complexity 1 21 0 7 641 246 192 0 0 chr15 7456765 7456817 -96038157 + (CATA)n Simple_repeat Simple_repeat 4 55 0 7 641 648 125 8 15 chr15 7457645 7457775 -96037199 + (TA)n Simple_repeat Simple_repeat 2 130 0 7 641 442 256 50 0 chr15 7459005 7459126 -96035848 - B1F SINE Alu 0 149 23 7 641 546 100 20 10 chr15 7459389 7459490 -96035484 + (GA)n Simple_repeat Simple_repeat 2 103 0 7 641 1134 283 82 33 chr15 7459496 7460018 -96034956 - L1MB7 LINE L1 -144 6040 5493 7 641 351 0 0 0 chr15 7460161 7460200 -96034774 + (TC)n Simple_repeat Simple_repeat 2 40 0 7 641 423 0 0 0 chr15 7460200 7460246 -96034728 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 641 2194 219 5 0 chr15 7461041 7461442 -96033532 + Lx9 LINE L1 6379 6781 -863 7 641 697 283 62 4 chr15 7461442 7461669 -96033305 - B4 SINE B4 -10 282 43 7 641 307 234 82 144 chr15 7461736 7462006 -96032968 - L1ME4a LINE L1 -27 6097 5845 7 641 736 291 29 0 chr15 7462280 7462486 -96032488 - ID_B1 SINE B4 -12 212 1 7 641 358 264 0 22 chr15 7462517 7462606 -96032368 + PB1D10 SINE Alu 29 115 -2 7 641 189 0 0 0 chr15 7463033 7463054 -96031920 + (TG)n Simple_repeat Simple_repeat 1 21 0 7 641 234 0 0 0 chr15 7463776 7463802 -96031172 + (CAA)n Simple_repeat Simple_repeat 1 26 0 7 641 378 0 0 0 chr15 7463802 7463844 -96031130 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 641 317 341 35 52 chr15 7464189 7464362 -96030612 - ID_B1 SINE B4 -53 171 2 7 641 31 44 0 0 chr15 7464374 7464419 -96030555 + AT_rich Low_complexity Low_complexity 1 45 0 7 641 321 236 28 12 chr15 7465329 7465431 -96029543 + PB1D10 SINE Alu 11 116 -33 7 641 495 0 0 0 chr15 7465459 7465514 -96029460 + (GGA)n Simple_repeat Simple_repeat 1 55 0 7 641 484 286 8 0 chr15 7465651 7465770 -96029204 - MTEa LTR MaLR -8 371 252 7 641 447 247 53 33 chr15 7465837 7465988 -96028986 - MTEa LTR MaLR -225 154 1 7 641 819 232 22 58 chr15 7466052 7466276 -96028698 + B3 SINE B2 1 216 0 7 641 1101 171 66 9 chr15 7467928 7468141 -96026833 + URR1B DNA MER1_type 1 225 0 7 641 279 0 0 0 chr15 7468335 7468366 -96026608 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 641 232 308 13 0 chr15 7468436 7468514 -96026460 + L1M5 LINE L1 5589 5667 -457 7 641 799 271 24 34 chr15 7468873 7469079 -96025895 - ID_B1 SINE B4 0 224 21 7 641 225 235 122 65 chr15 7469559 7469682 -96025292 - MER5B DNA MER1_type -36 142 13 7 641 345 301 106 53 chr15 7470190 7470341 -96024633 + RSINE1 SINE B4 7 165 0 7 641 450 311 24 39 chr15 7470559 7470766 -96024208 + MIR SINE MIR 25 228 -34 7 641 347 127 88 35 chr15 7470788 7470959 -96024015 + (TA)n Simple_repeat Simple_repeat 1 180 0 7 642 272 337 83 11 chr15 7473674 7473854 -96021120 + MIRb SINE MIR 17 209 -59 7 642 222 116 0 0 chr15 7474060 7474103 -96020871 + (A)n Simple_repeat Simple_repeat 1 43 0 7 642 282 364 83 31 chr15 7474274 7474563 -96020411 - MLT1L LTR MaLR -305 305 2 7 642 23 0 0 0 chr15 7474937 7474960 -96020014 + AT_rich Low_complexity Low_complexity 1 23 0 7 642 716 271 21 5 chr15 7475114 7475303 -96019671 + B3A SINE B2 1 192 -6 7 642 1136 95 0 0 chr15 7475425 7475572 -96019402 + B1_Mus1 SINE Alu 1 147 -1 7 642 527 246 0 6 chr15 7476318 7476498 -96018476 + (TG)n Simple_repeat Simple_repeat 1 179 0 7 642 532 230 12 6 chr15 7476464 7476630 -96018344 + (TATATG)n Simple_repeat Simple_repeat 6 172 0 7 642 940 227 0 25 chr15 7476663 7476862 -96018112 - B3 SINE B2 -22 194 1 7 642 1009 264 74 45 chr15 7477023 7477376 -96017598 + MTEa LTR MaLR 13 375 -4 7 642 285 324 88 32 chr15 7477496 7477713 -96017261 - MIR SINE MIR -1 261 33 7 642 219 316 17 109 chr15 7477917 7478091 -96016883 - MIRb SINE MIR -17 251 94 7 642 195 125 0 0 chr15 7479244 7479284 -96015690 + (TC)n Simple_repeat Simple_repeat 1 40 0 7 642 519 17 0 0 chr15 7479284 7479344 -96015630 + (CA)n Simple_repeat Simple_repeat 1 60 0 7 642 504 77 0 0 chr15 7479344 7479422 -96015552 + (GA)n Simple_repeat Simple_repeat 1 78 0 7 642 489 244 26 9 chr15 7479907 7480023 -96014951 - B1F2 SINE Alu -1 148 31 7 642 21 0 0 0 chr15 7481745 7481766 -96013208 + AT_rich Low_complexity Low_complexity 1 21 0 7 642 605 122 11 0 chr15 7482275 7482365 -96012609 + B3 SINE B2 4 94 -122 7 642 543 187 0 0 chr15 7482418 7482525 -96012449 + GA-rich Low_complexity Low_complexity 2 108 0 7 642 789 41 0 0 chr15 7482594 7482691 -96012283 + (TC)n Simple_repeat Simple_repeat 1 97 0 7 642 605 162 35 6 chr15 7484398 7484572 -96010402 + GA-rich Low_complexity Low_complexity 1 179 0 7 642 351 0 0 0 chr15 7484647 7484686 -96010288 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 642 429 20 0 0 chr15 7484686 7484735 -96010239 + (GA)n Simple_repeat Simple_repeat 2 51 0 7 642 486 120 0 0 chr15 7485476 7485551 -96009423 + (TG)n Simple_repeat Simple_repeat 2 76 0 7 642 265 295 52 103 chr15 7485606 7485742 -96009232 + B1F2 SINE Alu 12 140 -9 7 642 902 268 0 18 chr15 7485754 7485978 -96008996 + ID_B1 SINE B4 3 222 -2 7 642 315 299 36 36 chr15 7486421 7486532 -96008442 + ORR1E LTR MaLR 1 111 -248 7 642 209 33 33 0 chr15 7486726 7486756 -96008218 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 7 642 1582 138 15 22 chr15 7486769 7487043 -96007931 + ORR1B1 LTR MaLR 1 272 -122 7 642 2775 164 18 20 chr15 7487046 7487601 -96007373 - RLTR31_Mm LTR ERVK -7 554 1 7 642 715 136 23 0 chr15 7487601 7487725 -96007249 + ORR1B1 LTR MaLR 268 394 0 7 642 738 34 0 0 chr15 7488998 7489087 -96005887 + (TC)n Simple_repeat Simple_repeat 2 90 0 7 642 768 290 62 68 chr15 7489115 7489159 -96005815 - B4A SINE B4 0 292 265 7 642 306 0 0 0 chr15 7489159 7489193 -96005781 + (TCTG)n Simple_repeat Simple_repeat 1 34 0 7 642 768 290 62 68 chr15 7489193 7489440 -96005534 - B4A SINE B4 -28 264 3 7 642 207 0 0 0 chr15 7489756 7489779 -96005195 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 642 3685 44 5 0 chr15 7489976 7490410 -96004564 + RLTR10C LTR ERVK 1 436 0 7 642 70778 3 0 0 chr15 7490410 7497991 -95996983 + MMERVK10C-int LTR ERVK 1 7581 0 7 642 3685 44 5 0 chr15 7497991 7498425 -95996549 + RLTR10C LTR ERVK 1 436 0 7 642 1224 129 113 5 chr15 7499247 7499450 -95995524 + URR1A DNA MER1_type 2 226 0 7 642 217 95 79 0 chr15 7500694 7500757 -95994217 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 642 1580 229 59 10 chr15 7500894 7501282 -95993692 - MTD LTR MaLR 0 419 13 2 642 548 14 14 0 chr15 7502308 7502377 -95992597 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 3 642 242 312 52 0 chr15 7502385 7502462 -95992512 - ID2 SINE ID -2 81 1 4 642 180 200 0 0 chr15 7502888 7502928 -95992046 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 642 330 91 0 0 chr15 7502928 7502983 -95991991 + (GA)n Simple_repeat Simple_repeat 1 55 0 6 642 352 97 32 0 chr15 7503184 7503246 -95991728 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 642 227 241 241 0 chr15 7503435 7503514 -95991460 - ORR1C2 LTR MaLR -117 261 164 8 642 387 182 0 0 chr15 7503515 7503592 -95991382 + GA-rich Low_complexity Low_complexity 2 78 0 9 642 1024 162 0 26 chr15 7503592 7503782 -95991192 - ORR1C2 LTR MaLR -199 185 1 8 642 425 325 128 20 chr15 7503979 7504183 -95990791 + Lx8 LINE L1 7246 7471 -2 1 642 769 265 57 26 chr15 7505476 7505740 -95989234 - Lx8 LINE L1 -407 7066 6795 1 642 766 221 102 43 chr15 7505753 7506131 -95988843 - RMER20B LTR ERVK -38 589 128 1 642 478 207 0 5 chr15 7506992 7507093 -95987881 + B1F2 SINE Alu 41 138 -12 1 642 285 326 55 11 chr15 7507190 7507373 -95987601 + MamRep605 Unknown Unknown 51 241 -635 1 642 381 43 0 0 chr15 7507508 7507555 -95987419 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 642 425 139 25 0 chr15 7507555 7507634 -95987340 + G-rich Low_complexity Low_complexity 1 81 0 1 642 271 367 75 19 chr15 7507828 7507989 -95986985 - B4A SINE B4 -121 171 2 1 642 2399 97 22 8 chr15 7508247 7508610 -95986364 + L1_Mus4 LINE L1 6266 6633 -3 1 642 27 29 0 0 chr15 7508610 7508644 -95986330 + AT_rich Low_complexity Low_complexity 1 34 0 1 642 234 0 0 0 chr15 7508876 7508902 -95986072 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 642 236 378 40 13 chr15 7509409 7509559 -95985415 - MLT1H LTR MaLR -93 517 364 2 642 432 0 0 0 chr15 7509926 7509974 -95985000 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 2 642 445 325 148 31 chr15 7510060 7510317 -95984657 - MLT1H LTR MaLR -196 353 67 2 642 1921 256 47 23 chr15 7510460 7511542 -95983432 - Lx5 LINE L1 -145 6905 5894 2 642 657 329 110 64 chr15 7511582 7511906 -95983068 + MER74A LTR ERVL 14 364 -194 2 642 3373 33 5 2 chr15 7511906 7512301 -95982673 + MTA_Mm LTR MaLR 1 396 0 2 642 657 329 110 64 chr15 7512301 7512476 -95982498 + MER74A LTR ERVL 365 535 -23 2 642 435 286 177 7 chr15 7512624 7512765 -95982209 - B3A SINE B2 -33 165 1 2 642 226 257 29 0 chr15 7512979 7513049 -95981925 - MIR SINE MIR -18 244 173 2 642 216 0 0 0 chr15 7515151 7515175 -95979799 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 642 1074 58 0 0 chr15 7515362 7515500 -95979474 + (GGAGA)n Simple_repeat Simple_repeat 3 140 0 2 642 40 0 0 0 chr15 7516171 7516211 -95978763 + AT_rich Low_complexity Low_complexity 1 40 0 3 642 631 179 159 1 chr15 7516486 7516646 -95978328 - B3 SINE B2 -22 173 1 3 642 269 206 62 16 chr15 7517088 7517152 -95977822 - MT2A LTR ERVL -458 75 9 3 642 587 304 14 9 chr15 7517153 7517375 -95977599 + RMER5 LTR ERV1 305 527 -7 3 642 2670 216 216 22 chr15 7517720 7517742 -95977232 - RMER1B Other Other -3 1063 1034 3 642 330 26 0 0 chr15 7517742 7517781 -95977193 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 642 2670 216 216 22 chr15 7517781 7518512 -95976462 - RMER1B Other Other -33 1033 164 3 642 2755 134 58 69 chr15 7518544 7518563 -95976411 - RLTR31_Mm LTR ERVK 0 561 538 3 642 222 37 0 0 chr15 7518563 7518590 -95976384 + (GAA)n Simple_repeat Simple_repeat 2 28 0 3 642 2755 134 58 69 chr15 7518590 7519039 -95975935 - RLTR31_Mm LTR ERVK -24 537 99 3 642 328 53 34 34 chr15 7519039 7519098 -95975876 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 3 642 2755 134 58 69 chr15 7519098 7519195 -95975779 - RLTR31_Mm LTR ERVK -463 98 2 3 642 1294 183 0 13 chr15 7519318 7519545 -95975429 + URR1B DNA MER1_type 2 225 0 3 642 8221 33 6 2 chr15 7519655 7520797 -95974177 - L1Md_F2 LINE L1 -1 6581 5439 4 642 395 298 37 37 chr15 7520889 7521053 -95973921 + MIRb SINE MIR 61 224 -44 4 642 246 319 33 0 chr15 7521085 7521176 -95973798 - ORR1E LTR MaLR -10 349 256 4 642 541 200 20 0 chr15 7521712 7521812 -95973162 - PB1D9 SINE Alu -18 102 1 4 642 1642 156 127 72 chr15 7523037 7523424 -95971550 + RMER17C LTR ERVK 1 408 -2 4 642 646 131 29 18 chr15 7523516 7523687 -95971287 + (TAGA)n Simple_repeat Simple_repeat 2 174 0 4 642 282 242 92 50 chr15 7525487 7525726 -95969248 + L1MEb LINE L1 712 960 -5176 4 642 224 185 19 0 chr15 7526617 7526671 -95968303 + GA-rich Low_complexity Low_complexity 2 56 0 4 642 253 291 13 0 chr15 7526793 7526872 -95968102 + L1MEb LINE L1 4531 4610 -1536 4 642 481 289 82 29 chr15 7527216 7527631 -95967343 + L1MEb LINE L1 5114 5551 -628 4 642 266 265 14 42 chr15 7528132 7528203 -95966771 - Charlie12 DNA MER1_type 0 2873 2805 4 642 342 0 0 0 chr15 7528250 7528288 -95966686 + (GA)n Simple_repeat Simple_repeat 1 38 0 4 642 22 0 0 0 chr15 7528369 7528391 -95966583 + AT_rich Low_complexity Low_complexity 1 22 0 5 642 198 0 0 0 chr15 7528399 7528421 -95966553 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 642 451 200 40 0 chr15 7529858 7529958 -95965016 - PB1D9 SINE Alu -16 104 1 5 642 267 282 71 26 chr15 7529865 7529978 -95964996 - B4 SINE B4 -106 186 69 5 642 258 336 40 27 chr15 7530088 7530238 -95964736 - MER21B LTR ERV1 -264 599 448 5 642 561 187 194 105 chr15 7530240 7530431 -95964543 + B3 SINE B2 2 209 -7 5 642 306 210 48 0 chr15 7531052 7531114 -95963860 + HAL1-3A_ME LINE L1 1968 2032 -826 5 642 196 148 0 69 chr15 7531114 7531172 -95963802 + (CATA)n Simple_repeat Simple_repeat 1 54 0 5 642 1487 239 38 3 chr15 7532596 7532940 -95962034 + MTE2b LTR MaLR 1 356 -23 5 642 257 158 228 0 chr15 7533516 7533573 -95961401 + ID4_ SINE ID 14 83 0 5 642 283 301 0 0 chr15 7534374 7534447 -95960527 - MLT1J2 LTR MaLR -130 318 246 6 642 270 0 0 0 chr15 7534746 7534776 -95960198 + (TC)n Simple_repeat Simple_repeat 1 30 0 6 642 288 0 0 0 chr15 7534776 7534807 -95960167 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 642 194 150 0 24 chr15 7534826 7534867 -95960107 + (TATG)n Simple_repeat Simple_repeat 4 43 0 6 642 248 358 14 21 chr15 7534882 7535022 -95959952 - Tigger5 DNA MER2_type -9 2397 2259 6 642 229 327 0 84 chr15 7535055 7535162 -95959812 - Tigger5 DNA MER2_type -2269 137 40 6 642 920 270 89 33 chr15 7535213 7535573 -95959401 - MLT2D LTR ERVL -19 395 16 6 642 652 272 14 71 chr15 7536380 7536590 -95958384 - B3A SINE B2 0 198 1 6 642 454 279 96 84 chr15 7537895 7538279 -95956695 + MLT1B LTR MaLR 6 463 -4 6 642 2356 153 3 8 chr15 7538549 7538918 -95956056 - ORR1B2 LTR MaLR 0 367 1 6 642 23 0 0 0 chr15 7539077 7539100 -95955874 + AT_rich Low_complexity Low_complexity 1 23 0 6 642 248 312 32 21 chr15 7539343 7539438 -95955536 + MTEa LTR MaLR 6 101 -258 7 642 257 299 30 0 chr15 7539709 7539776 -95955198 + MTEa LTR MaLR 296 364 -15 7 642 233 309 68 68 chr15 7540174 7540396 -95954578 - L1M5 LINE L1 -255 5909 5688 7 642 590 99 11 0 chr15 7540505 7540596 -95954378 + (TC)n Simple_repeat Simple_repeat 1 92 0 7 642 227 294 11 32 chr15 7540641 7540736 -95954238 + MLT1A1 LTR MaLR 316 408 0 7 642 594 317 0 0 chr15 7540926 7541071 -95953903 - RSINE1 SINE B4 -2 163 19 7 642 786 113 0 0 chr15 7541163 7541305 -95953669 + (TATTG)n Simple_repeat Simple_repeat 2 143 0 7 642 408 301 36 29 chr15 7542518 7542658 -95952316 + MER91A DNA Tip100 8 148 -48 7 642 414 0 0 0 chr15 7543517 7543563 -95951411 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 642 398 319 56 92 chr15 7544166 7544446 -95950528 + B4A SINE B4 3 287 -5 7 642 1270 246 59 37 chr15 7544786 7545141 -95949833 - MTEa LTR MaLR -11 368 6 7 642 252 0 0 0 chr15 7545788 7545816 -95949158 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 8 642 529 244 102 23 chr15 7545816 7545992 -95948982 - B4A SINE B4 -79 213 24 8 642 1044 134 0 0 chr15 7547195 7547366 -95947608 + (TCCC)n Simple_repeat Simple_repeat 3 173 0 8 642 210 136 0 0 chr15 7552528 7552572 -95942402 + (A)n Simple_repeat Simple_repeat 1 44 0 8 642 2354 182 108 135 chr15 7553667 7554295 -95940679 - RMER19C LTR ERVK 0 611 1 8 642 1477 139 9 0 chr15 7554422 7554645 -95940329 - URR1B DNA MER1_type 0 225 1 8 642 842 303 17 95 chr15 7555002 7555359 -95939615 + MTE2a LTR MaLR 3 331 -48 8 642 800 0 0 55 chr15 7555365 7555492 -95939482 + (TTCTC)n Simple_repeat Simple_repeat 5 124 0 8 642 745 142 12 81 chr15 7556775 7556936 -95938038 - ORR1D1 LTR MaLR -222 152 3 8 642 473 0 18 0 chr15 7556969 7557026 -95937948 + (TG)n Simple_repeat Simple_repeat 1 58 0 8 642 29 70 0 0 chr15 7557316 7557373 -95937601 + AT_rich Low_complexity Low_complexity 1 57 0 9 642 210 154 0 0 chr15 7558241 7558280 -95936694 + A-rich Low_complexity Low_complexity 2 40 0 9 642 532 146 18 26 chr15 7558400 7558567 -95936407 - RMER17B LTR ERVK -396 510 345 9 642 546 67 0 0 chr15 7558956 7559031 -95935943 + (TC)n Simple_repeat Simple_repeat 2 76 0 9 642 453 346 55 6 chr15 7559138 7559301 -95935673 - Tigger5 DNA MER2_type -2164 242 72 9 642 1719 132 131 10 chr15 7560132 7560423 -95934551 + ORR1A3 LTR MaLR 1 326 0 9 642 274 266 38 0 chr15 7562341 7562420 -95932554 + MER121 Unknown Unknown 134 215 -197 9 642 559 272 173 62 chr15 7563519 7563762 -95931212 - B4 SINE B4 -18 274 5 9 642 388 314 89 20 chr15 7565314 7565561 -95929413 - L1M5 LINE L1 -537 5587 5324 9 642 638 211 57 104 chr15 7566763 7566975 -95927999 + MTE2a LTR MaLR 170 371 -8 9 642 518 218 0 32 chr15 7566991 7567176 -95927798 + GA-rich Low_complexity Low_complexity 1 179 0 1 642 418 287 157 22 chr15 7567513 7567787 -95927187 - L1ME2z LINE L1 -3 6441 6131 1 642 189 107 0 0 chr15 7569822 7569850 -95925124 + (T)n Simple_repeat Simple_repeat 1 28 0 1 642 672 168 13 7 chr15 7571419 7571569 -95923405 + CT-rich Low_complexity Low_complexity 2 152 0 1 642 200 130 22 0 chr15 7571570 7571616 -95923358 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 642 384 59 0 0 chr15 7571628 7571679 -95923295 + (TGAA)n Simple_repeat Simple_repeat 2 52 0 1 642 462 317 70 58 chr15 7571702 7571943 -95923031 + MIRb SINE MIR 7 250 -18 1 642 219 242 0 0 chr15 7572024 7572086 -95922888 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 642 876 269 98 8 chr15 7572691 7572957 -95922017 - B4 SINE B4 -2 290 1 1 642 468 278 0 6 chr15 7573747 7573917 -95921057 + (CA)n Simple_repeat Simple_repeat 2 170 0 1 642 207 374 77 31 chr15 7574268 7574464 -95920510 - MIRb SINE MIR -38 230 26 1 642 23 54 0 0 chr15 7574635 7574672 -95920302 + AT_rich Low_complexity Low_complexity 1 37 0 1 642 546 295 84 22 chr15 7576308 7576617 -95918357 + L1ME4a LINE L1 5524 5858 -266 1 642 277 205 125 25 chr15 7576615 7576735 -95918239 + L1ME4a LINE L1 5993 6124 0 1 642 568 342 121 16 chr15 7577411 7577717 -95917257 + MER121 Unknown Unknown 69 406 -6 1 642 1782 21 0 0 chr15 7578437 7578628 -95916346 + B2_Mm1t SINE B2 1 191 -2 1 642 234 128 0 0 chr15 7578959 7578998 -95915976 + (TATATG)n Simple_repeat Simple_repeat 4 42 0 1 642 190 348 0 14 chr15 7579232 7579302 -95915672 - MIRc SINE MIR -79 189 121 1 642 1369 195 95 7 chr15 7579959 7580253 -95914721 - MER58B DNA MER1_type 0 341 22 1 642 787 267 104 31 chr15 7581249 7581771 -95913203 + Lx8 LINE L1 5611 6178 -1295 1 642 872 147 0 29 chr15 7581778 7581918 -95913056 - B1_Mus1 SINE Alu -1 147 12 1 642 1195 229 23 4 chr15 7582046 7582309 -95912665 + Lx5 LINE L1 6783 7050 0 1 642 21 0 0 0 chr15 7582445 7582466 -95912508 + AT_rich Low_complexity Low_complexity 1 21 0 1 642 214 320 40 0 chr15 7584337 7584412 -95910562 - MIRm SINE MIR -167 109 32 1 642 1046 145 57 14 chr15 7585844 7586054 -95908920 - Lx2A1 LINE L1 -6 7002 6784 1 642 1110 91 28 14 chr15 7586661 7586796 -95908178 + B1_Mus2 SINE Alu 1 139 -8 1 642 455 45 0 15 chr15 7586796 7586863 -95908111 + (CCAA)n Simple_repeat Simple_repeat 2 67 0 1 642 198 343 236 29 chr15 7586872 7587148 -95907826 - L2b LINE L2 -69 3306 2974 1 642 327 77 19 37 chr15 7587346 7587400 -95907574 - HAL1-3A_ME LINE L1 -831 2027 1975 1 642 504 244 0 0 chr15 7587400 7587564 -95907410 + (TG)n Simple_repeat Simple_repeat 1 164 0 1 642 627 233 0 4 chr15 7587576 7587823 -95907151 + (TG)n Simple_repeat Simple_repeat 1 245 0 1 642 425 324 102 55 chr15 7587841 7588096 -95906878 - B4A SINE B4 -1 291 25 1 642 685 247 36 99 chr15 7588178 7588430 -95906544 - MTEa LTR MaLR -7 372 137 1 642 430 219 121 17 chr15 7588473 7588589 -95906385 + B1F SINE Alu 12 139 -10 1 642 526 286 54 7 chr15 7588592 7588710 -95906264 + RSINE1 SINE B4 2 127 -38 1 642 240 35 0 0 chr15 7588710 7588739 -95906235 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 1 642 526 286 54 7 chr15 7588739 7588768 -95906206 + RSINE1 SINE B4 128 156 -9 1 642 186 71 0 0 chr15 7588775 7588803 -95906171 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 642 191 45 43 43 chr15 7590410 7590457 -95904517 + (CAA)n Simple_repeat Simple_repeat 2 48 0 1 642 435 19 0 0 chr15 7590653 7590705 -95904269 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 642 303 167 67 0 chr15 7591079 7591139 -95903835 - ID_B1 SINE B4 -1 223 160 1 642 2024 133 45 56 chr15 7591139 7591497 -95903477 - ORR1B1 LTR MaLR 0 394 41 1 642 515 338 13 0 chr15 7591511 7591662 -95903312 - ID_B1 SINE B4 -67 157 5 1 642 429 311 96 99 chr15 7591683 7591976 -95902998 - B4 SINE B4 0 292 1 1 642 195 129 0 0 chr15 7592908 7592939 -95902035 + (T)n Simple_repeat Simple_repeat 1 31 0 1 642 904 114 0 7 chr15 7594416 7594557 -95900417 - URR1B DNA MER1_type 0 225 86 1 642 911 305 66 4 chr15 7594635 7594908 -95900066 - B4 SINE B4 0 292 3 1 642 327 269 74 86 chr15 7595955 7596118 -95898856 + L2c LINE L2 3042 3202 -185 1 642 289 350 135 52 chr15 7597638 7597927 -95897047 + L2a LINE L2 3068 3380 -46 1 642 938 96 6 0 chr15 7598128 7598294 -95896680 + (TG)n Simple_repeat Simple_repeat 2 168 0 1 642 264 257 62 35 chr15 7598295 7598408 -95896566 + MLT1C LTR MaLR 240 355 -112 1 642 5417 63 24 0 chr15 7598436 7599091 -95895883 - L1Md_F2 LINE L1 0 6582 5912 1 642 342 67 0 0 chr15 7599278 7599323 -95895651 + (T)n Simple_repeat Simple_repeat 1 45 0 1 642 371 333 60 13 chr15 7599612 7599761 -95895213 + LTR16C LTR ERVL 176 331 -158 1 642 659 278 55 42 chr15 7599853 7600090 -95894884 - MLT1A0 LTR MaLR -124 241 2 1 643 340 218 0 112 chr15 7602658 7602756 -95892218 - ID_B1 SINE B4 -1 223 137 1 643 328 282 54 72 chr15 7602756 7602769 -95892205 - B1F SINE Alu -1 148 40 1 643 1913 153 68 108 chr15 7602901 7603281 -95891693 + ORR1B2 LTR MaLR 1 365 -2 1 643 271 299 234 0 chr15 7603295 7603402 -95891572 + MIRb SINE MIR 47 178 -90 1 643 520 339 63 40 chr15 7603646 7603996 -95890978 - MLT1H2 LTR MaLR -1 488 131 1 643 335 286 33 11 chr15 7604510 7604602 -95890372 + PB1D10 SINE Alu 1 94 -23 1 643 315 269 159 15 chr15 7605089 7605221 -95889753 + MIR SINE MIR 112 262 0 1 643 585 332 106 34 chr15 7605868 7606161 -95888813 + ORR1E LTR MaLR 45 358 -1 1 643 1162 75 0 13 chr15 7606985 7607134 -95887840 + B1_Mm SINE Alu 1 147 0 1 643 183 42 0 0 chr15 7607137 7607161 -95887813 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 643 398 189 58 47 chr15 7607206 7607378 -95887596 + RMER17C LTR ERVK 102 275 -135 1 643 2334 178 24 7 chr15 7607511 7607924 -95887050 - Lx5 LINE L1 -223 6827 6408 1 643 3968 117 16 5 chr15 7607916 7608524 -95886450 - L1_Mur2 LINE L1 -972 4905 4291 1 643 10730 155 67 20 chr15 7608539 7611053 -95883921 - L1_Mur2 LINE L1 -2672 3205 587 1 643 582 266 41 46 chr15 7611840 7612037 -95882937 + B3A SINE B2 2 197 -1 1 643 309 293 88 77 chr15 7612044 7612214 -95882760 + L1M5 LINE L1 3266 3437 -2709 1 643 729 274 48 22 chr15 7612274 7612546 -95882428 + L1M5 LINE L1 3417 3695 -2451 1 643 307 346 54 45 chr15 7612546 7612770 -95882204 - MLT1J1 LTR MaLR -193 251 26 1 643 192 135 0 0 chr15 7612780 7612817 -95882157 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 1 643 408 111 0 0 chr15 7612858 7612921 -95882053 + (TGAA)n Simple_repeat Simple_repeat 1 63 0 1 643 883 163 3 6 chr15 7612946 7613062 -95881912 + (TGAA)n Simple_repeat Simple_repeat 1 115 0 1 643 3402 30 0 0 chr15 7613062 7613456 -95881518 + L1Md_T LINE L1 6189 6582 0 1 643 883 146 6 11 chr15 7613456 7613475 -95881499 + (TGAA)n Simple_repeat Simple_repeat 1 19 0 1 643 1107 134 0 0 chr15 7613475 7613654 -95881320 + (TGAG)n Simple_repeat Simple_repeat 1 179 0 1 643 883 145 4 8 chr15 7613654 7613789 -95881185 + (TGAA)n Simple_repeat Simple_repeat 1 134 0 1 643 186 43 0 0 chr15 7614999 7615022 -95879952 + (TTGG)n Simple_repeat Simple_repeat 2 24 0 1 643 286 93 0 0 chr15 7615378 7615421 -95879553 - MT2B LTR ERVL 0 584 542 1 643 257 275 0 0 chr15 7615427 7615496 -95879478 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 643 694 259 33 43 chr15 7615508 7615801 -95879173 - MT2B LTR ERVL -56 545 274 1 643 487 266 31 8 chr15 7615812 7615941 -95879033 - MT2B LTR ERVL -400 133 2 1 643 462 322 61 61 chr15 7616317 7616529 -95878445 - MT2A LTR ERVL -132 401 190 1 643 337 275 137 0 chr15 7616621 7616752 -95878222 + B1F SINE Alu 1 149 0 1 643 194 0 39 0 chr15 7616759 7616785 -95878189 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 643 811 156 0 0 chr15 7616800 7616928 -95878046 + B1_Mus2 SINE Alu 8 135 -12 1 643 441 209 446 0 chr15 7617484 7617632 -95877342 + B3 SINE B2 2 215 -1 1 643 403 267 29 0 chr15 7617652 7617757 -95877217 + PB1D10 SINE Alu 3 110 -7 1 643 929 133 0 27 chr15 7617773 7617958 -95877016 + GA-rich Low_complexity Low_complexity 1 180 0 1 643 795 196 131 20 chr15 7618116 7618314 -95876660 + MTE2b LTR MaLR 1 220 -159 1 643 250 325 12 42 chr15 7618544 7618711 -95876263 + (CCA)n Simple_repeat Simple_repeat 3 164 0 1 643 680 323 107 23 chr15 7621040 7621433 -95873541 + MT2A LTR ERVL 1 426 -107 1 643 233 293 105 70 chr15 7621856 7621999 -95872975 + LTR16C LTR ERVL 342 489 0 1 643 1512 138 0 4 chr15 7622068 7622294 -95872680 - URR1B DNA MER1_type 0 225 1 1 643 684 239 30 12 chr15 7622308 7622477 -95872497 + B3 SINE B2 44 215 -1 1 643 21 0 0 0 chr15 7622477 7622498 -95872476 + AT_rich Low_complexity Low_complexity 1 21 0 1 643 966 251 98 25 chr15 7622553 7622880 -95872094 + MTEb LTR MaLR 13 363 -16 1 643 411 268 167 11 chr15 7623364 7623538 -95871436 + MER63A DNA AcHobo 1 201 -9 1 643 315 268 81 20 chr15 7624839 7624938 -95870036 - PB1D10 SINE Alu 0 117 13 1 643 960 253 65 50 chr15 7625018 7625297 -95869677 - B4A SINE B4 -2 290 8 1 643 838 154 220 0 chr15 7625378 7625560 -95869414 + URR1A DNA MER1_type 3 224 -2 1 643 419 168 28 28 chr15 7627014 7627155 -95867819 + CT-rich Low_complexity Low_complexity 3 143 0 1 643 580 183 27 22 chr15 7627160 7627309 -95867665 - B1_Mus1 SINE Alu -2 146 1 1 643 242 325 12 70 chr15 7627340 7627426 -95867548 - ID4_ SINE ID 0 83 3 1 643 404 286 0 9 chr15 7627446 7627552 -95867422 - PB1D10 SINE Alu -12 105 1 1 643 302 296 121 0 chr15 7627624 7627756 -95867218 - L1M5 LINE L1 -441 5683 5536 2 643 695 287 10 35 chr15 7627839 7628041 -95866933 + ID_B1 SINE B4 3 199 -25 2 643 528 272 96 46 chr15 7628112 7628467 -95866507 - L1ME1 LINE L1 -33 6146 5774 2 643 215 250 0 0 chr15 7628593 7628645 -95866329 + T-rich Low_complexity Low_complexity 1 52 0 2 643 536 284 87 18 chr15 7628740 7628959 -95866015 - L1MB2 LINE L1 -120 6051 5818 2 643 1100 305 41 29 chr15 7628975 7629394 -95865580 + Lx8 LINE L1 6869 7292 -181 2 643 820 318 128 17 chr15 7629437 7630023 -95864951 - L1MEc LINE L1 -5306 1094 444 2 643 204 243 28 55 chr15 7630292 7630401 -95864573 - MIR3 SINE MIR -21 187 82 2 643 988 138 118 35 chr15 7630414 7630617 -95864357 - URR1A DNA MER1_type 0 226 7 2 643 514 303 13 0 chr15 7632402 7632554 -95862420 + RSINE1 SINE B4 2 155 -10 2 643 23 54 0 0 chr15 7632607 7632644 -95862330 + AT_rich Low_complexity Low_complexity 1 37 0 2 643 426 315 13 26 chr15 7634360 7634513 -95860461 - MLT1I LTR MaLR -202 209 59 2 643 4686 72 3 3 chr15 7634916 7635526 -95859448 - L1_Mus3 LINE L1 0 6638 6029 2 643 23 0 0 0 chr15 7635526 7635549 -95859425 + AT_rich Low_complexity Low_complexity 1 23 0 2 643 1183 170 9 22 chr15 7635701 7635930 -95859044 - URR1A DNA MER1_type 0 226 1 2 643 382 254 166 24 chr15 7636941 7637110 -95857864 + LTR16C LTR ERVL 286 478 -11 2 643 33 20 0 20 chr15 7638931 7638951 -95856023 + AT_rich Low_complexity Low_complexity 1 20 0 2 643 884 199 193 0 chr15 7638951 7639132 -95855842 + B3 SINE B2 1 216 0 2 643 33 20 0 20 chr15 7639132 7639162 -95855812 + AT_rich Low_complexity Low_complexity 1 30 0 2 643 441 222 0 0 chr15 7639487 7639568 -95855406 + ID4_ SINE ID 2 82 -1 2 643 1672 117 67 3 chr15 7640107 7640389 -95854585 - Lx LINE L1 0 6654 6355 2 643 694 195 0 0 chr15 7640389 7640507 -95854467 + L1VL2 LINE L1 288 405 -5930 2 643 886 297 57 35 chr15 7640686 7641000 -95853974 + MLT2C2 LTR ERVL 1 321 -143 2 643 581 283 84 0 chr15 7641029 7641195 -95853779 + B3A SINE B2 1 180 -18 2 643 595 243 5 156 chr15 7641219 7641443 -95853531 - B3A SINE B2 -3 195 6 2 643 307 247 11 76 chr15 7641453 7641545 -95853429 + MLT2C2 LTR ERVL 411 496 -67 2 643 339 25 0 0 chr15 7641604 7641644 -95853330 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 643 207 186 0 0 chr15 7641657 7641700 -95853274 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 643 306 0 0 0 chr15 7642301 7642335 -95852639 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 643 191 239 15 0 chr15 7642833 7642900 -95852074 + GA-rich Low_complexity Low_complexity 2 69 0 2 643 364 304 49 6 chr15 7643195 7643357 -95851617 + MIR SINE MIR 21 189 -73 2 643 656 254 25 50 chr15 7644435 7644634 -95850340 + B3A SINE B2 2 195 -3 2 643 629 66 0 11 chr15 7644741 7644833 -95850141 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 2 643 1145 58 45 0 chr15 7644837 7644993 -95849981 - B2_Mm2 SINE B2 -31 164 2 2 643 383 0 0 21 chr15 7645514 7645562 -95849412 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2 643 1148 70 0 7 chr15 7645562 7645701 -95849273 - B1_Mus2 SINE Alu -4 143 5 2 643 720 254 30 6 chr15 7646045 7646211 -95848763 + ID_B1 SINE B4 55 224 0 2 643 255 274 0 0 chr15 7646342 7646404 -95848570 - MER5A DNA MER1_type -82 107 46 2 643 888 212 68 40 chr15 7646437 7646687 -95848287 + MLT1D LTR MaLR 249 505 0 2 643 467 254 41 8 chr15 7646701 7646824 -95848150 + MER5A DNA MER1_type 56 182 -7 2 643 1163 250 42 35 chr15 7647270 7647556 -95847418 - B4 SINE B4 -2 290 3 2 643 187 247 137 0 chr15 7647644 7647717 -95847257 - L3 LINE CR1 -89 4400 4318 2 643 530 232 35 28 chr15 7648657 7648799 -95846175 - B1_Mur2 SINE Alu -6 143 1 2 643 858 326 66 25 chr15 7649385 7649439 -95845535 - MLT2D LTR ERVL -2 412 357 2 643 336 48 0 0 chr15 7649439 7649481 -95845493 + (GA)n Simple_repeat Simple_repeat 1 42 0 2 643 858 326 66 25 chr15 7649481 7649738 -95845236 - MLT2D LTR ERVL -58 356 93 2 643 1263 94 0 0 chr15 7649738 7649918 -95845056 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 643 858 326 66 25 chr15 7649918 7650001 -95844973 - MLT2D LTR ERVL -322 92 1 2 643 379 273 138 71 chr15 7650559 7650784 -95844190 + MLT1F LTR MaLR 220 459 -89 2 643 1113 63 0 14 chr15 7650841 7650986 -95843988 - B1_Mus1 SINE Alu -5 143 1 2 643 324 0 0 0 chr15 7651013 7651049 -95843925 + (TAA)n Simple_repeat Simple_repeat 1 36 0 2 643 667 260 24 6 chr15 7652179 7652349 -95842625 - MTEb LTR MaLR -3 376 204 2 643 1996 140 85 0 chr15 7652349 7652677 -95842297 + L1Md_F LINE L1 391 746 -5870 2 643 10817 84 4 0 chr15 7652656 7654125 -95840849 + L1Md_F LINE L1 2506 3980 -1903 2 643 692 111 0 0 chr15 7654157 7654256 -95840718 - L1_Mm LINE L1 -1193 4690 4592 2 643 1073 72 7 0 chr15 7654253 7654391 -95840583 + L1Md_F3 LINE L1 6048 6186 -398 2 643 373 78 0 0 chr15 7654391 7654442 -95840532 + L1Md_F3 LINE L1 6513 6563 -19 2 643 647 266 27 59 chr15 7654451 7654671 -95840303 - MTEb LTR MaLR -166 213 1 2 643 327 19 58 0 chr15 7655938 7655990 -95838984 + (TC)n Simple_repeat Simple_repeat 2 56 0 2 643 198 91 0 0 chr15 7655993 7656026 -95838948 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 2 643 2451 236 81 17 chr15 7656517 7657308 -95837666 + Lx9 LINE L1 5051 5930 -1714 2 643 1766 316 71 4 chr15 7657335 7658038 -95836936 - Lx9 LINE L1 -594 7050 6301 2 643 292 250 53 21 chr15 7658819 7658913 -95836061 - MER63B DNA AcHobo -28 408 312 2 643 221 255 160 75 chr15 7659548 7659654 -95835320 + B1F SINE Alu 35 149 0 2 643 608 48 12 0 chr15 7660330 7660414 -95834560 + (GA)n Simple_repeat Simple_repeat 2 86 0 2 643 286 297 14 0 chr15 7660440 7660514 -95834460 - RSINE1 SINE B4 -14 151 77 2 643 343 325 80 68 chr15 7660544 7660706 -95834268 - B4A SINE B4 -122 170 7 2 643 21 0 0 0 chr15 7660734 7660755 -95834219 + AT_rich Low_complexity Low_complexity 1 21 0 2 643 351 0 0 0 chr15 7660990 7661029 -95833945 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 643 369 0 0 0 chr15 7661029 7661070 -95833904 + (GA)n Simple_repeat Simple_repeat 1 41 0 2 643 923 286 34 3 chr15 7661088 7661379 -95833595 - MLT2C1 LTR ERVL -48 349 50 2 643 607 280 0 0 chr15 7661650 7661782 -95833192 - RSINE1 SINE B4 -18 147 16 2 643 789 242 10 40 chr15 7662466 7662664 -95832310 - B3A SINE B2 -1 197 6 2 643 334 296 143 55 chr15 7663633 7663940 -95831034 + MER74B LTR ERVL 58 391 -231 2 643 228 295 11 33 chr15 7663952 7664043 -95830931 + MER74B LTR ERVL 433 521 -101 2 643 925 225 5 24 chr15 7664235 7664440 -95830534 + B3 SINE B2 16 216 0 2 643 639 334 112 6 chr15 7665523 7665863 -95829111 - MLT1I LTR MaLR -2 409 34 2 643 297 252 35 56 chr15 7667428 7667571 -95827403 + L1ME3 LINE L1 4978 5117 -1029 2 643 236 53 0 26 chr15 7667588 7667627 -95827347 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2 643 561 230 150 0 chr15 7668005 7668192 -95826782 + L1ME3 LINE L1 5648 5862 -300 2 643 408 287 0 10 chr15 7668318 7668420 -95826554 + PB1D10 SINE Alu 12 112 -5 2 643 324 316 0 29 chr15 7668442 7668582 -95826392 + Lx9 LINE L1 5839 5974 -1670 2 643 450 0 0 0 chr15 7668677 7668727 -95826247 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 643 1894 319 31 12 chr15 7668735 7669386 -95825588 + Lx9 LINE L1 6330 6992 -652 2 643 1507 160 66 35 chr15 7669723 7670040 -95824934 + ORR1B2 LTR MaLR 1 327 -40 2 643 412 105 0 0 chr15 7670040 7670097 -95824877 + L1_Mur1 LINE L1 5501 5557 -329 2 643 7325 59 2 14 chr15 7670096 7671019 -95823955 + L1_Mus1 LINE L1 5655 6566 -1 2 643 351 127 0 0 chr15 7671034 7671089 -95823885 + ORR1B2 LTR MaLR 340 394 0 2 643 495 344 94 43 chr15 7672596 7673034 -95821940 - L2 LINE L2 -538 2881 2422 2 643 368 309 0 0 chr15 7673159 7673256 -95821718 - MER63B DNA AcHobo -4 432 336 2 643 207 0 0 0 chr15 7674189 7674212 -95820762 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 643 1286 115 15 15 chr15 7675221 7675400 -95819574 + B2_Mm2 SINE B2 1 181 -14 2 643 378 0 0 0 chr15 7675400 7675442 -95819532 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 2 643 1286 115 15 15 chr15 7675442 7675457 -95819517 + B2_Mm2 SINE B2 182 195 0 2 643 673 195 6 12 chr15 7675457 7675618 -95819356 + GA-rich Low_complexity Low_complexity 1 160 0 2 643 213 65 0 0 chr15 7676754 7676785 -95818189 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 643 318 80 0 0 chr15 7676788 7676838 -95818136 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 643 443 191 28 9 chr15 7678320 7678426 -95816548 - ORR1D1 LTR MaLR 0 374 267 2 643 267 206 155 22 chr15 7680945 7681034 -95813940 - ORR1E LTR MaLR -14 365 269 2 643 263 279 93 0 chr15 7681259 7681345 -95813629 - MLT1A1 LTR MaLR -278 130 37 2 643 289 272 87 0 chr15 7681909 7682001 -95812973 + MIR3 SINE MIR 95 194 -14 2 643 2320 95 38 0 chr15 7682800 7683115 -95811859 - ORR1A2 LTR MaLR 0 327 1 2 643 320 275 9 9 chr15 7683519 7683629 -95811345 + L2a LINE L2 2796 2905 -514 2 643 797 293 116 27 chr15 7683647 7684019 -95810955 - MLT1A1 LTR MaLR 0 408 4 2 643 216 299 141 50 chr15 7684046 7684390 -95810584 + L2a LINE L2 3015 3393 -33 2 643 305 357 5 151 chr15 7684427 7684612 -95810362 + B4 SINE B4 4 161 -131 2 643 1824 205 64 3 chr15 7684626 7685002 -95809972 + MTD LTR MaLR 13 411 -8 2 643 240 306 35 0 chr15 7684996 7685081 -95809893 + B4 SINE B4 146 233 -59 2 643 414 0 0 0 chr15 7685098 7685144 -95809830 + (CATATA)n Simple_repeat Simple_repeat 6 51 0 2 643 851 244 135 42 chr15 7686775 7687109 -95807865 + MLT1A0 LTR MaLR 1 365 0 2 643 25 0 0 0 chr15 7687131 7687156 -95807818 + AT_rich Low_complexity Low_complexity 1 25 0 2 643 792 274 155 21 chr15 7687156 7687581 -95807393 + MER63C DNA AcHobo 109 590 -340 2 643 375 312 56 22 chr15 7687702 7687882 -95807092 + L1MC4 LINE L1 6823 7008 -1034 2 643 265 304 58 19 chr15 7688599 7688703 -95806271 + L1MC4 LINE L1 7238 7345 -697 2 643 454 309 154 13 chr15 7688720 7689031 -95805943 + L1MC4 LINE L1 7398 7752 -290 2 643 251 328 65 8 chr15 7691260 7691383 -95803591 + MLT1H LTR MaLR 402 531 -18 3 643 1250 83 0 11 chr15 7691639 7691821 -95803153 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 643 357 186 150 25 chr15 7693200 7693360 -95801614 + (CAGG)n Simple_repeat Simple_repeat 1 180 0 3 643 290 274 22 79 chr15 7693293 7693471 -95801503 + (CAGAGA)n Simple_repeat Simple_repeat 4 171 0 3 643 5696 42 0 39 chr15 7693504 7693883 -95801091 + L1Md_F2 LINE L1 4888 5266 -617 3 643 1154 75 0 7 chr15 7693883 7694031 -95800943 + B1_Mus2 SINE Alu 1 147 0 3 643 5696 42 0 39 chr15 7694031 7694377 -95800597 + L1Md_F2 LINE L1 5267 5585 -298 3 643 8449 34 1 0 chr15 7694378 7695358 -95799616 + L1Md_F2 LINE L1 5587 6567 -15 3 643 959 143 186 26 chr15 7695439 7695633 -95799341 + URR1A DNA MER1_type 2 226 0 3 643 317 300 33 16 chr15 7695992 7696114 -95798860 - L1MA4A LINE L1 -391 5912 5789 3 643 446 260 81 50 chr15 7696143 7696408 -95798566 + L1M5 LINE L1 5296 5567 -597 3 643 467 264 158 60 chr15 7696652 7696918 -95798056 - B4A SINE B4 0 292 1 3 643 1771 184 76 22 chr15 7697138 7697494 -95797480 - ORR1C1 LTR MaLR -3 375 1 3 643 271 296 15 0 chr15 7698909 7699002 -95795972 - MIRc SINE MIR -125 143 45 3 643 594 299 85 37 chr15 7699404 7699838 -95795136 - MLT1D LTR MaLR -2 503 49 3 643 249 108 0 0 chr15 7700107 7700144 -95794830 + (CCCCCA)n Simple_repeat Simple_repeat 3 39 0 3 643 324 326 75 0 chr15 7701251 7701398 -95793576 - MER5A DNA MER1_type -25 164 7 3 643 360 250 64 77 chr15 7701918 7702074 -95792900 - MER97c DNA MER1_type? -915 175 22 3 643 1086 96 0 28 chr15 7703003 7703185 -95791789 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 3 643 271 195 0 38 chr15 7703189 7703269 -95791705 + GA-rich Low_complexity Low_complexity 2 78 0 3 643 26 0 0 0 chr15 7703528 7703554 -95791420 + AT_rich Low_complexity Low_complexity 1 26 0 3 643 446 278 86 6 chr15 7704305 7704460 -95790514 - ORR1E LTR MaLR -56 303 136 3 643 608 261 99 37 chr15 7704460 7704783 -95790191 + RLTR15 LTR ERVK 1 343 -16 3 643 550 268 14 21 chr15 7704793 7704934 -95790040 - ORR1E LTR MaLR -219 140 1 3 643 1134 263 101 27 chr15 7705200 7705586 -95789388 - MTD LTR MaLR -14 405 5 3 643 323 281 123 13 chr15 7705593 7705748 -95789226 - MIRb SINE MIR -9 259 88 3 643 363 91 0 0 chr15 7706732 7706787 -95788187 - URR1B DNA MER1_type 0 225 171 3 643 5595 167 21 23 chr15 7707786 7708913 -95786061 - MTC-int LTR MaLR -128 1130 6 3 643 2136 124 101 48 chr15 7708916 7709313 -95785661 - MTC LTR MaLR 0 421 4 3 643 4429 174 67 12 chr15 7709315 7710164 -95784810 + RMER19B LTR ERVK 1 896 -6 3 643 399 177 24 37 chr15 7710613 7710695 -95784279 - ID SINE ID -142 82 2 3 643 291 0 0 0 chr15 7710987 7711022 -95783952 - U6 snRNA snRNA 0 107 73 3 643 840 93 132 7 chr15 7711124 7711275 -95783699 + URR1A DNA MER1_type 56 225 -1 3 643 362 344 44 6 chr15 7711409 7711567 -95783407 - Tigger5 DNA MER2_type -2242 164 1 3 643 481 276 32 32 chr15 7711641 7711798 -95783176 + RSINE1 SINE B4 9 165 0 3 643 240 287 68 11 chr15 7712183 7712271 -95782703 + LTR33C LTR ERVL 30 122 -507 3 643 5249 114 26 4 chr15 7712272 7713053 -95781921 - Lx4A LINE L1 -404 6654 5857 3 643 354 245 58 47 chr15 7713164 7713335 -95781639 + HAL1-2a_MD LINE L1 2343 2515 -509 3 643 328 333 13 13 chr15 7713335 7713487 -95781487 + (CCA)n Simple_repeat Simple_repeat 3 154 0 3 643 1926 57 12 0 chr15 7714143 7714387 -95780587 - L1Md_F2 LINE L1 -2 6580 6334 3 643 435 19 0 0 chr15 7714855 7714907 -95780067 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 643 444 238 0 0 chr15 7714918 7715002 -95779972 - B3A SINE B2 -38 160 77 3 643 537 224 97 22 chr15 7715274 7715449 -95779525 - B3A SINE B2 -8 187 1 3 643 640 239 10 50 chr15 7716524 7716722 -95778252 + MER121 Unknown Unknown 134 323 -89 3 643 339 188 0 0 chr15 7717024 7717036 -95777938 + (CA)n Simple_repeat Simple_repeat 1 12 0 3 643 423 0 0 0 chr15 7717036 7717083 -95777891 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 643 339 188 0 0 chr15 7717083 7717155 -95777819 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 643 967 319 52 36 chr15 7717697 7718140 -95776834 - MLT1E1A LTR MaLR 0 680 231 3 643 457 279 21 69 chr15 7718279 7718468 -95776506 - MLT1E1A LTR MaLR -442 212 33 3 643 434 262 0 0 chr15 7719599 7719706 -95775268 + MIR SINE MIR 18 124 -138 3 643 585 268 39 13 chr15 7719811 7719966 -95775008 + B3A SINE B2 3 161 -37 3 643 333 0 0 0 chr15 7719971 7720008 -95774966 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 643 381 342 45 32 chr15 7720078 7720235 -95774739 + RSINE1 SINE B4 4 162 -3 3 643 1221 187 142 25 chr15 7720281 7720604 -95774370 + ORR1D1 LTR MaLR 14 374 0 3 643 348 267 0 72 chr15 7720989 7721183 -95773791 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 643 387 0 0 0 chr15 7721683 7721726 -95773248 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 643 189 0 0 0 chr15 7721876 7721897 -95773077 + (CA)n Simple_repeat Simple_repeat 1 21 0 3 643 413 298 168 33 chr15 7722092 7722556 -95772418 + L1MA5 LINE L1 5719 6249 -51 3 643 1046 286 86 52 chr15 7722871 7723292 -95771682 - MLT1J LTR MaLR -59 453 19 3 643 429 318 94 33 chr15 7723468 7723583 -95771391 + L1ME1 LINE L1 5786 5923 -256 3 643 261 0 0 0 chr15 7723583 7723612 -95771362 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 643 429 318 94 33 chr15 7723612 7723857 -95771117 + L1ME1 LINE L1 5924 6167 -12 3 643 410 249 143 12 chr15 7725375 7725488 -95769486 - PB1D7 SINE Alu -6 114 6 3 643 330 261 10 71 chr15 7725415 7725514 -95769460 - ID_B1 SINE B4 -67 157 65 3 643 1150 60 4 20 chr15 7726154 7726409 -95768565 + (TG)n Simple_repeat Simple_repeat 1 250 0 3 643 754 197 0 15 chr15 7726419 7726553 -95768421 - B1_Mur1 SINE Alu 0 149 18 3 643 1302 259 36 14 chr15 7726561 7726921 -95768053 + ORR1D2 LTR MaLR 3 370 0 3 643 1445 279 33 6 chr15 7727783 7728143 -95766831 + MTEa LTR MaLR 6 375 -4 3 643 267 335 115 42 chr15 7728220 7728385 -95766589 - MIRb SINE MIR -62 206 30 3 643 420 20 0 0 chr15 7728869 7728918 -95766056 + (TATATG)n Simple_repeat Simple_repeat 3 51 0 3 643 345 24 0 0 chr15 7730698 7730740 -95764234 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 3 643 1160 75 0 13 chr15 7730746 7730895 -95764079 - B1_Mus2 SINE Alu 0 147 1 3 643 544 158 9 9 chr15 7731077 7731192 -95763782 + CT-rich Low_complexity Low_complexity 1 115 0 3 643 855 266 23 0 chr15 7732897 7733111 -95761863 + MER20 DNA MER1_type 1 219 0 3 80 867 369 35 5 chr15 7733135 7733541 -95761433 - MER63B DNA AcHobo 0 436 19 3 644 953 262 311 23 chr15 7733836 7734213 -95760761 + MLT2B2 LTR ERVL 3 488 -27 3 644 310 222 148 0 chr15 7734386 7734467 -95760507 - MTD LTR MaLR -227 192 100 3 644 8355 48 0 2 chr15 7734577 7735735 -95759239 - L1Md_F2 LINE L1 -1 6581 5426 3 644 555 221 88 0 chr15 7735804 7735917 -95759057 + B1_Mur1 SINE Alu 6 128 -21 3 644 302 158 0 50 chr15 7735934 7735994 -95758980 - MTD LTR MaLR -360 59 3 3 644 245 358 91 8 chr15 7736089 7736210 -95758764 + LTR16C LTR ERVL 2 132 -357 3 644 216 0 0 0 chr15 7737138 7737162 -95757812 + (A)n Simple_repeat Simple_repeat 1 24 0 3 644 228 306 88 44 chr15 7737299 7737412 -95757562 + L2a LINE L2 3308 3425 -1 3 644 210 37 0 0 chr15 7737728 7737755 -95757219 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 644 449 312 129 24 chr15 7738355 7738564 -95756410 + B4A SINE B4 2 232 -60 3 644 517 256 23 8 chr15 7738564 7738694 -95756280 + RSINE1 SINE B4 3 134 -31 3 644 276 234 16 0 chr15 7738810 7738874 -95756100 + (CATATA)n Simple_repeat Simple_repeat 6 70 0 3 644 348 24 0 0 chr15 7739220 7739261 -95755713 + (GA)n Simple_repeat Simple_repeat 1 41 0 3 644 989 256 92 19 chr15 7739356 7739627 -95755347 + B4 SINE B4 1 291 -1 3 644 315 0 0 0 chr15 7739657 7739692 -95755282 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 644 381 43 0 0 chr15 7740166 7740213 -95754761 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 644 185 329 0 79 chr15 7740533 7740609 -95754365 + L3 LINE CR1 888 957 -3532 3 644 317 43 21 0 chr15 7740737 7740784 -95754190 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 3 644 563 165 11 33 chr15 7740918 7741100 -95753874 + (CAGAGA)n Simple_repeat Simple_repeat 1 178 0 3 644 504 0 0 0 chr15 7741202 7741258 -95753716 + (TA)n Simple_repeat Simple_repeat 1 56 0 3 644 578 225 98 78 chr15 7741264 7741457 -95753517 - B3A SINE B2 0 198 2 3 644 855 327 47 69 chr15 7741457 7741821 -95753153 - MTE-int LTR MaLR -486 1094 741 3 644 329 342 57 32 chr15 7742120 7742277 -95752697 + RSINE1 SINE B4 1 161 -4 3 644 279 114 0 0 chr15 7742299 7742343 -95752631 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 3 644 542 271 158 20 chr15 7742348 7742551 -95752423 + L1M5 LINE L1 5479 5709 -455 3 644 410 226 22 7 chr15 7743647 7743785 -95751189 + (TGGA)n Simple_repeat Simple_repeat 1 140 0 3 644 236 322 98 47 chr15 7743873 7744132 -95750842 + L2c LINE L2 3044 3317 -70 3 644 419 329 6 30 chr15 7744773 7744939 -95750035 + RSINE1 SINE B4 2 163 -2 3 644 920 237 31 0 chr15 7744986 7745180 -95749794 + B3 SINE B2 1 200 -16 3 644 2516 105 67 13 chr15 7745814 7746200 -95748774 - MTB_Mm LTR MaLR 0 407 1 3 644 285 333 23 0 chr15 7746481 7746568 -95748406 - MIRc SINE MIR -14 254 166 3 644 227 353 33 77 chr15 7746680 7746861 -95748113 + Cheshire DNA MER1_type 108 280 -2140 3 644 395 154 0 25 chr15 7746941 7747021 -95747953 + GA-rich Low_complexity Low_complexity 1 78 0 4 644 328 258 0 8 chr15 7747109 7747234 -95747740 + T-rich Low_complexity Low_complexity 2 125 0 4 644 234 310 87 53 chr15 7747742 7747756 -95747218 + YREP_Mm Unknown Unknown 157 306 -1501 4 644 453 315 0 8 chr15 7747756 7747887 -95747087 - ID_B1 SINE B4 -4 220 91 4 644 766 262 31 132 chr15 7747936 7748006 -95746968 + B4A SINE B4 1 71 -221 4 644 360 0 0 0 chr15 7748006 7748046 -95746928 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 644 766 262 31 132 chr15 7748046 7748300 -95746674 + B4A SINE B4 72 292 0 4 644 320 233 110 0 chr15 7748321 7748394 -95746580 + ID4_ SINE ID 3 83 0 4 644 219 36 0 0 chr15 7748394 7748422 -95746552 + (CAAAAA)n Simple_repeat Simple_repeat 5 32 0 4 644 697 329 36 59 chr15 7749974 7750278 -95744696 - MLT1H LTR MaLR -207 342 46 4 644 234 91 0 0 chr15 7750303 7750336 -95744638 + (GA)n Simple_repeat Simple_repeat 1 33 0 4 644 435 19 0 0 chr15 7750719 7750771 -95744203 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 644 1599 135 33 72 chr15 7754005 7754340 -95740634 - RLTRETN_Mm LTR ERVK 0 322 1 4 644 423 209 21 21 chr15 7754572 7754665 -95740309 + PB1D7 SINE Alu 27 119 -1 4 644 192 152 0 0 chr15 7754739 7754772 -95740202 + (CG)n Simple_repeat Simple_repeat 1 33 0 4 644 495 0 0 0 chr15 7754788 7754843 -95740131 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 644 427 340 36 5 chr15 7755027 7755219 -95739755 + Lx8 LINE L1 7059 7256 -217 4 644 606 28 0 0 chr15 7755230 7755302 -95739672 + (CATATA)n Simple_repeat Simple_repeat 3 74 0 4 644 243 0 0 0 chr15 7755344 7755371 -95739603 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 644 513 0 0 0 chr15 7755694 7755751 -95739223 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 4 644 421 179 321 0 chr15 7757151 7757263 -95737711 + B1F2 SINE Alu 2 149 0 4 644 591 158 0 0 chr15 7757263 7757390 -95737584 + GA-rich Low_complexity Low_complexity 3 129 0 4 644 581 192 123 37 chr15 7757834 7757996 -95736978 + MTEa LTR MaLR 202 377 -2 4 644 30 59 0 0 chr15 7758799 7758850 -95736124 + AT_rich Low_complexity Low_complexity 1 51 0 4 644 180 0 0 0 chr15 7760906 7760926 -95734048 + (CGG)n Simple_repeat Simple_repeat 3 22 0 4 644 258 32 0 0 chr15 7763640 7763671 -95731303 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 4 644 342 0 0 0 chr15 7764225 7764263 -95730711 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 644 413 297 36 14 chr15 7767300 7767440 -95727534 - MER5B DNA MER1_type -27 151 9 4 644 254 217 0 104 chr15 7768902 7768969 -95726005 + ID SINE ID 1 60 -164 4 644 502 45 0 101 chr15 7769086 7769185 -95725789 - L1Md_F2 LINE L1 0 6582 6494 4 644 206 62 0 30 chr15 7770195 7770228 -95724746 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 4 644 255 211 77 26 chr15 7770232 7770310 -95724664 - Charlie2a DNA MER1_type -1309 1552 1471 4 644 240 173 64 39 chr15 7770579 7770657 -95724317 - L1MC4 LINE L1 -195 7847 7768 4 644 225 293 72 54 chr15 7770950 7771116 -95723858 - Charlie2a DNA MER1_type -2687 174 6 4 644 486 0 0 0 chr15 7771204 7771258 -95723716 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 644 810 58 0 0 chr15 7771671 7771775 -95723199 + (GGGA)n Simple_repeat Simple_repeat 3 106 0 4 644 1333 170 5 0 chr15 7771910 7772134 -95722840 - URR1B DNA MER1_type 0 225 1 4 644 330 159 0 0 chr15 7773329 7773417 -95721557 + (TCTG)n Simple_repeat Simple_repeat 1 88 0 4 644 233 274 30 22 chr15 7774188 7774307 -95720667 - MIR SINE MIR -147 121 6 4 644 26 0 0 0 chr15 7776054 7776080 -95718894 + AT_rich Low_complexity Low_complexity 1 26 0 4 644 512 250 187 36 chr15 7776960 7777126 -95717848 - L1MC1 LINE L1 -38 6295 6105 4 644 426 108 0 0 chr15 7777313 7777378 -95717596 + (TTA)n Simple_repeat Simple_repeat 2 66 0 4 644 15921 51 10 1 chr15 7777591 7780261 -95714713 - L1Md_F2 LINE L1 0 6582 3889 4 644 260 259 56 11 chr15 7781136 7781226 -95713748 + B1_Mur1 SINE Alu 55 148 -1 4 644 863 255 158 21 chr15 7781596 7781849 -95713125 - MTD LTR MaLR -5 414 115 4 644 1158 122 0 0 chr15 7781849 7782029 -95712945 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 4 644 863 255 158 21 chr15 7782029 7782103 -95712871 - MTD LTR MaLR -305 114 42 4 644 188 344 49 8 chr15 7782278 7782401 -95712573 - L2 LINE L2 -475 2944 2817 4 644 735 272 97 12 chr15 7782442 7782699 -95712275 + B4A SINE B4 1 279 -13 4 644 414 0 0 0 chr15 7782972 7783018 -95711956 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 644 276 30 0 0 chr15 7783117 7783150 -95711824 + (CCAA)n Simple_repeat Simple_repeat 2 34 0 4 644 596 272 72 10 chr15 7786031 7786239 -95708735 - ID_B1 SINE B4 -3 221 1 4 644 358 244 0 0 chr15 7787770 7787848 -95707126 - L2a LINE L2 0 3426 3349 4 644 450 0 0 0 chr15 7787851 7787901 -95707073 + (CATA)n Simple_repeat Simple_repeat 2 51 0 4 644 486 0 0 0 chr15 7788284 7788338 -95706636 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 644 696 197 25 103 chr15 7789303 7789507 -95705467 - MER53 DNA hAT 0 193 6 4 644 521 182 0 0 chr15 7789551 7789661 -95705313 + GA-rich Low_complexity Low_complexity 1 110 0 4 644 859 151 0 24 chr15 7789661 7789831 -95705143 + (CAGAGA)n Simple_repeat Simple_repeat 1 166 0 4 644 270 0 0 0 chr15 7789831 7789861 -95705113 + (GGCTG)n Simple_repeat Simple_repeat 1 30 0 4 644 291 306 103 61 chr15 7789947 7790208 -95704766 + ORSL DNA Tip100 1 272 -3 4 644 1811 137 88 64 chr15 7791176 7791551 -95703423 + ORR1C2 LTR MaLR 1 384 0 4 644 404 345 81 23 chr15 7792037 7792298 -95702676 + MLT1I LTR MaLR 136 411 0 4 644 2194 141 57 3 chr15 7792439 7792808 -95702166 + RMER1B Other Other 675 1063 -3 4 644 268 321 127 9 chr15 7792825 7792935 -95702039 - L2 LINE L2 -614 2805 2683 4 644 490 346 82 26 chr15 7794016 7794357 -95700617 - MLT1K LTR MaLR -136 459 100 4 644 731 233 19 96 chr15 7794376 7794468 -95700506 + ORR1E LTR MaLR 5 92 -267 4 644 2499 114 21 97 chr15 7794468 7794933 -95700041 - RLTR23 LTR ERV1 0 430 1 4 644 731 233 19 96 chr15 7794933 7795049 -95699925 + ORR1E LTR MaLR 93 197 -162 4 644 614 225 533 9 chr15 7795088 7795298 -95699676 - MTD LTR MaLR -99 320 1 4 644 350 212 25 12 chr15 7795333 7795414 -95699560 + ORR1E LTR MaLR 209 290 -80 4 644 934 250 5 5 chr15 7795409 7795610 -95699364 + B4A SINE B4 20 220 -72 4 644 576 42 0 0 chr15 7795635 7795706 -95699268 + (CA)n Simple_repeat Simple_repeat 1 71 0 4 644 208 299 15 0 chr15 7796045 7796112 -95698862 + GA-rich Low_complexity Low_complexity 2 69 0 4 644 1338 58 0 0 chr15 7796122 7796294 -95698680 + (TGGA)n Simple_repeat Simple_repeat 3 174 0 4 644 227 291 25 0 chr15 7796455 7796534 -95698440 + L1MC4a LINE L1 7158 7238 -644 4 644 347 317 93 33 chr15 7797447 7797622 -95697352 - L1MB7 LINE L1 -30 6144 5955 4 644 3304 53 5 0 chr15 7797622 7798020 -95696954 + MTB LTR MaLR 1 400 0 4 644 347 317 93 33 chr15 7798020 7798059 -95696915 - L1MB7 LINE L1 -220 5954 5917 4 644 698 291 81 25 chr15 7798079 7798400 -95696574 - L1MB7 LINE L1 -318 5866 5528 4 644 210 287 184 0 chr15 7798432 7798519 -95696455 - MIR SINE MIR -89 173 71 4 644 265 330 16 13 chr15 7798944 7799035 -95695939 + B1F SINE Alu 7 99 -21 4 644 36148 35 0 0 chr15 7799365 7804595 -95690379 + L1Md_T LINE L1 263 5589 -297 4 644 9166 5 0 0 chr15 7804595 7805591 -95689383 + L1Md_T LINE L1 5590 6585 0 4 644 1207 245 15 8 chr15 7805833 7805952 -95689022 + Lx6 LINE L1 6629 6748 -712 4 644 582 54 0 0 chr15 7805952 7806026 -95688948 + (GGGA)n Simple_repeat Simple_repeat 1 74 0 4 644 2026 260 26 35 chr15 7806026 7806676 -95688298 + Lx6 LINE L1 6460 7460 0 4 644 338 198 165 0 chr15 7807212 7807303 -95687671 + MLT1A1 LTR MaLR 291 396 -12 4 644 28 0 0 0 chr15 7809658 7809686 -95685288 + AT_rich Low_complexity Low_complexity 1 28 0 4 644 310 333 111 0 chr15 7809897 7810014 -95684960 + B1F1 SINE Alu 12 141 -8 4 644 261 0 0 0 chr15 7811037 7811066 -95683908 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 644 537 242 149 117 chr15 7811108 7811368 -95683606 + B4 SINE B4 3 276 -16 4 644 446 62 0 30 chr15 7811368 7811435 -95683539 + (CATATA)n Simple_repeat Simple_repeat 6 70 0 4 644 537 242 149 117 chr15 7811435 7811455 -95683519 + B4 SINE B4 277 292 0 4 644 282 293 0 0 chr15 7811481 7811614 -95683360 + (CA)n Simple_repeat Simple_repeat 1 133 0 4 644 398 158 31 31 chr15 7811708 7811806 -95683168 + L1MB2 LINE L1 6072 6169 -2 4 644 404 264 0 74 chr15 7814397 7814532 -95680442 - MLT1C LTR MaLR -10 457 333 4 644 186 298 46 35 chr15 7815103 7815190 -95679784 - MIR SINE MIR -129 133 46 4 644 351 0 0 0 chr15 7815664 7815703 -95679271 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 644 25 0 0 0 chr15 7816139 7816164 -95678810 + AT_rich Low_complexity Low_complexity 1 25 0 4 644 762 280 18 0 chr15 7817106 7817274 -95677700 + B3A SINE B2 1 171 -27 4 644 854 272 11 0 chr15 7817330 7817521 -95677453 - B3 SINE B2 -23 193 1 4 644 1049 238 98 72 chr15 7818624 7819041 -95675933 - MLT1C LTR MaLR 0 467 40 4 644 517 133 0 20 chr15 7819351 7819451 -95675523 + (TA)n Simple_repeat Simple_repeat 1 98 0 4 644 366 353 26 19 chr15 7819652 7819808 -95675166 - MLT1G1 LTR MaLR 0 579 423 4 644 371 278 18 27 chr15 7819848 7819959 -95675015 + PB1D10 SINE Alu 3 112 -5 4 644 429 284 0 0 chr15 7820246 7820348 -95674626 - B3 SINE B2 -5 211 110 4 644 423 0 0 0 chr15 7820353 7820400 -95674574 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 644 21 36 0 0 chr15 7822098 7822126 -95672848 + AT_rich Low_complexity Low_complexity 1 28 0 4 644 273 346 19 0 chr15 7822446 7822553 -95672421 - MIRb SINE MIR -8 260 152 4 644 204 194 0 0 chr15 7822585 7822621 -95672353 + C-rich Low_complexity Low_complexity 1 36 0 4 644 297 0 0 0 chr15 7824290 7824323 -95670651 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 644 234 0 0 0 chr15 7824323 7824348 -95670626 + (GA)n Simple_repeat Simple_repeat 1 26 0 5 644 277 283 100 10 chr15 7824631 7824731 -95670243 + L1ME1 LINE L1 6062 6170 -9 5 644 446 307 78 67 chr15 7824822 7825105 -95669869 + B4A SINE B4 4 289 -3 5 644 249 33 0 0 chr15 7825133 7825163 -95669811 + (CATA)n Simple_repeat Simple_repeat 4 33 0 5 644 26 30 0 0 chr15 7825294 7825327 -95669647 + AT_rich Low_complexity Low_complexity 1 33 0 5 644 970 249 0 28 chr15 7826530 7826745 -95668229 - B3 SINE B2 -7 209 1 5 644 1230 178 119 40 chr15 7827340 7827668 -95667306 - Lx9 LINE L1 -7 7637 7284 5 644 25 0 0 0 chr15 7828500 7828525 -95666449 + AT_rich Low_complexity Low_complexity 1 25 0 5 644 278 251 17 13 chr15 7828976 7829054 -95665920 - MIR3 SINE MIR -187 89 5 5 644 281 325 100 6 chr15 7829113 7829283 -95665691 + MIR SINE MIR 23 208 -54 5 644 447 296 65 7 chr15 7831349 7831502 -95663472 + RSINE1 SINE B4 2 163 -2 5 644 25 0 0 0 chr15 7831522 7831547 -95663427 + AT_rich Low_complexity Low_complexity 1 25 0 5 644 225 340 47 0 chr15 7831578 7831684 -95663290 + L2a LINE L2 3018 3128 -298 5 644 796 183 18 6 chr15 7831710 7831875 -95663099 + B3 SINE B2 1 167 -49 5 644 288 111 0 0 chr15 7831880 7831934 -95663040 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 644 24 0 0 0 chr15 7832458 7832482 -95662492 + AT_rich Low_complexity Low_complexity 1 24 0 5 644 360 43 0 0 chr15 7833062 7833108 -95661866 + (TATG)n Simple_repeat Simple_repeat 2 47 0 5 644 395 240 62 0 chr15 7833166 7833262 -95661712 + B1F SINE Alu 48 149 0 5 644 1188 68 0 0 chr15 7833490 7833637 -95661337 + B1_Mus1 SINE Alu 1 147 -1 5 644 271 247 81 112 chr15 7833678 7833812 -95661162 - B1F SINE Alu -3 145 20 5 644 217 167 18 36 chr15 7833943 7833972 -95661002 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 5 644 230 323 15 0 chr15 7833972 7834037 -95660937 - ID4_ SINE ID -17 66 1 5 644 217 167 18 36 chr15 7834037 7834063 -95660911 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 5 644 455 279 37 37 chr15 7834084 7834248 -95660726 - RSINE1 SINE B4 0 165 2 5 644 389 266 49 77 chr15 7836616 7836799 -95658175 - AmnSINE1 SINE SINE -205 370 193 5 644 246 62 0 0 chr15 7837510 7837542 -95657432 + (CCCCCT)n Simple_repeat Simple_repeat 4 35 0 5 644 264 353 65 11 chr15 7840856 7841042 -95653932 + L2a LINE L2 3192 3387 -39 5 644 25 31 0 0 chr15 7842787 7842819 -95652155 + AT_rich Low_complexity Low_complexity 1 32 0 5 644 511 311 13 7 chr15 7842827 7842976 -95651998 - RSINE1 SINE B4 0 165 16 5 644 246 62 0 0 chr15 7844328 7844360 -95650614 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 5 644 180 0 0 0 chr15 7844527 7844547 -95650427 + (A)n Simple_repeat Simple_repeat 1 20 0 5 644 622 176 179 19 chr15 7844810 7844972 -95650002 - RLTR25A LTR ERVK 0 1103 916 5 644 450 49 0 0 chr15 7844981 7845042 -95649932 + (TC)n Simple_repeat Simple_repeat 1 61 0 5 644 287 224 13 0 chr15 7845043 7845119 -95649855 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 644 469 285 35 0 chr15 7845555 7845699 -95649275 - B1F1 SINE Alu 0 149 1 5 644 1149 184 4 59 chr15 7845927 7846164 -95648810 - URR1B DNA MER1_type 0 225 2 5 644 180 0 0 0 chr15 7847254 7847274 -95647700 + (CAA)n Simple_repeat Simple_repeat 3 22 0 5 644 462 205 0 0 chr15 7848635 7848718 -95646256 - B3 SINE B2 -129 87 5 5 644 21 71 0 0 chr15 7849331 7849373 -95645601 + AT_rich Low_complexity Low_complexity 1 42 0 5 644 648 287 43 0 chr15 7849373 7849561 -95645413 - B3 SINE B2 -20 196 1 5 644 238 191 0 0 chr15 7850079 7850121 -95644853 - MIRm SINE MIR -16 260 219 5 644 219 103 26 0 chr15 7850361 7850400 -95644574 + L3b LINE CR1 176 215 -267 5 644 204 67 0 0 chr15 7851101 7851131 -95643843 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 5 644 645 276 75 20 chr15 7851239 7851439 -95643535 + ID_B1 SINE B4 14 224 0 5 644 465 259 92 23 chr15 7851559 7851733 -95643241 + L1MD2 LINE L1 5006 5191 -955 5 644 220 265 0 29 chr15 7851772 7851842 -95643132 + RSINE1 SINE B4 48 115 -50 5 644 324 70 0 0 chr15 7851843 7851886 -95643088 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 644 305 197 0 15 chr15 7851945 7852012 -95642962 + L1MD2 LINE L1 5211 5276 -870 5 644 394 311 116 52 chr15 7852020 7852079 -95642895 + L1MD2 LINE L1 5648 5712 -647 5 644 1110 43 50 0 chr15 7852079 7852219 -95642755 + B1_Mus2 SINE Alu 1 147 0 5 644 394 311 116 52 chr15 7852219 7852597 -95642377 + L1MD2 LINE L1 5713 6112 -247 5 644 263 337 126 21 chr15 7852610 7852801 -95642173 - RMER15 LTR ERVL -18 557 347 5 644 3403 26 21 3 chr15 7853622 7854011 -95640963 - MTA_Mm LTR MaLR 0 396 1 5 644 7636 81 8 69 chr15 7854011 7855181 -95639793 - MTA_Mm-int LTR MaLR 0 1098 1 5 644 3254 56 2 2 chr15 7855181 7855577 -95639397 - MTA_Mm LTR MaLR 0 396 1 5 644 2212 19 114 0 chr15 7855865 7856127 -95638847 - RLTR10B LTR ERVK 0 292 1 5 644 21 36 0 0 chr15 7857197 7857225 -95637749 + AT_rich Low_complexity Low_complexity 1 28 0 5 644 494 154 154 0 chr15 7857562 7857685 -95637289 - B1F SINE Alu -7 142 1 5 644 483 246 46 185 chr15 7858233 7858562 -95636412 + L1_Rod LINE L1 3327 3609 -2238 5 644 2074 248 49 22 chr15 7858704 7859294 -95635680 + L1_Rod LINE L1 3665 4270 -1577 5 644 207 100 0 0 chr15 7859444 7859474 -95635500 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 5 644 449 61 0 0 chr15 7859474 7859540 -95635434 - Lx3A LINE L1 -14 6967 6902 5 644 947 76 248 7 chr15 7859593 7859738 -95635236 + B2_Mm2 SINE B2 1 180 -15 5 644 690 298 13 44 chr15 7860381 7860606 -95634368 - ID_B1 SINE B4 -3 221 4 5 644 730 188 16 0 chr15 7860669 7860797 -95634177 + B3 SINE B2 1 130 -86 5 644 2875 33 0 6 chr15 7860877 7861216 -95633758 + IAPLTR1a_Mm LTR ERVK 1 337 0 5 80 56633 25 11 7 chr15 7861216 7867663 -95627311 + IAPEz-int LTR ERVK 8 6481 0 5 645 2875 33 0 6 chr15 7867663 7868002 -95626972 + IAPLTR1a_Mm LTR ERVK 1 337 0 5 645 1203 48 0 0 chr15 7868906 7869053 -95625921 + B1_Mus2 SINE Alu 1 147 0 5 645 1315 55 0 16 chr15 7869058 7869241 -95625733 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 645 213 39 0 0 chr15 7869940 7869966 -95625008 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 5 645 286 308 132 11 chr15 7870749 7870923 -95624051 - MIR SINE MIR -51 211 17 5 645 261 0 0 0 chr15 7870985 7871014 -95623960 + (CAGA)n Simple_repeat Simple_repeat 4 32 0 5 645 226 175 0 34 chr15 7871674 7871733 -95623241 + (CAAA)n Simple_repeat Simple_repeat 2 58 0 5 645 1123 180 63 0 chr15 7871842 7872031 -95622943 + B3 SINE B2 1 201 -15 5 645 234 0 0 0 chr15 7873595 7873621 -95621353 + (A)n Simple_repeat Simple_repeat 1 26 0 5 645 1084 53 30 0 chr15 7873622 7873755 -95621219 + B1_Mus2 SINE Alu 1 137 -10 5 645 180 0 0 0 chr15 7873755 7873775 -95621199 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5 645 364 344 22 30 chr15 7873883 7874018 -95620956 - RSINE1 SINE B4 -29 136 3 5 645 193 75 0 86 chr15 7874725 7874783 -95620191 + (TGG)n Simple_repeat Simple_repeat 1 53 0 5 645 507 347 59 22 chr15 7875790 7876111 -95618863 + HERV16-int LTR ERVL 505 837 -4159 5 645 231 61 0 0 chr15 7876223 7876256 -95618718 + (T)n Simple_repeat Simple_repeat 1 33 0 5 645 12361 15 0 0 chr15 7876269 7878372 -95616602 - L1Md_T LINE L1 0 6582 4480 5 645 9980 21 0 0 chr15 7878371 7879522 -95615452 + L1Md_T LINE L1 3335 4485 -1398 5 645 407 283 76 38 chr15 7879567 7879725 -95615249 + LTR16B2 LTR ERVL 287 450 -12 5 645 1481 129 9 4 chr15 7879875 7880100 -95614874 + URR1A DNA MER1_type 1 226 0 5 645 719 271 101 84 chr15 7880715 7881082 -95613892 - MTEa LTR MaLR -4 375 3 5 645 364 217 117 123 chr15 7882462 7882625 -95612349 - MER103 DNA DNA -4 162 1 5 645 351 0 0 0 chr15 7886487 7886526 -95608448 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 645 228 111 0 0 chr15 7886595 7886631 -95608343 + (A)n Simple_repeat Simple_repeat 1 36 0 5 645 9443 67 7 3 chr15 7886810 7888757 -95606217 + L1_Mus1 LINE L1 4612 6567 0 5 645 198 0 0 0 chr15 7888879 7888901 -95606073 + (T)n Simple_repeat Simple_repeat 1 22 0 5 645 971 209 83 5 chr15 7888915 7889107 -95605867 + B3 SINE B2 5 211 -5 5 645 21 89 0 0 chr15 7889190 7889246 -95605728 + AT_rich Low_complexity Low_complexity 1 56 0 5 645 333 211 0 0 chr15 7889265 7889336 -95605638 + Lx9 LINE L1 7018 7088 -556 5 645 1005 227 96 9 chr15 7889326 7889650 -95605324 + Lx9 LINE L1 7293 7644 0 5 645 1654 173 163 3 chr15 7889920 7890251 -95604723 - ORR1C2 LTR MaLR 0 384 1 5 645 796 219 0 0 chr15 7890333 7890497 -95604477 - Lx9 LINE L1 -2 7642 7479 5 645 272 218 53 42 chr15 7892108 7892203 -95602771 + B1F SINE Alu 24 119 -1 5 645 8711 67 14 10 chr15 7892316 7893504 -95601470 + MusHAL1 LINE L1 835 2027 -685 5 645 583 288 7 0 chr15 7893873 7894012 -95600962 - RSINE1 SINE B4 -23 142 3 5 645 255 284 0 82 chr15 7894079 7894152 -95600822 + ID_B1 SINE B4 32 98 -126 5 645 347 0 23 0 chr15 7894595 7894638 -95600336 + (TC)n Simple_repeat Simple_repeat 2 45 0 5 645 321 89 0 0 chr15 7895270 7895315 -95599659 + (A)n Simple_repeat Simple_repeat 1 45 0 5 645 239 239 43 29 chr15 7895360 7895429 -95599545 + RSINE1 SINE B4 96 165 0 5 645 985 48 8 0 chr15 7895457 7895582 -95599392 - B1_Mus1 SINE Alu 0 148 23 5 645 393 102 0 0 chr15 7895672 7895731 -95599243 + (TAAA)n Simple_repeat Simple_repeat 4 62 0 5 645 801 190 68 11 chr15 7895786 7895962 -95599012 + RLTR11A2 LTR ERVK 1 186 -341 5 645 3537 138 20 8 chr15 7895962 7896552 -95598422 + Lx2 LINE L1 5750 6346 -651 5 645 234 91 0 0 chr15 7896638 7896671 -95598303 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 6 645 188 0 74 0 chr15 7896913 7896940 -95598034 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 6 645 7786 36 1 1 chr15 7896942 7897851 -95597123 - L1Md_F2 LINE L1 -24 6558 5650 6 645 4384 108 26 20 chr15 7897851 7898503 -95596471 + Lx2 LINE L1 6336 6991 -6 5 645 917 92 14 0 chr15 7898503 7898644 -95596330 + (GAAA)n Simple_repeat Simple_repeat 4 146 0 6 645 274 262 88 0 chr15 7898644 7898724 -95596250 + RLTR11A2 LTR ERVK 181 267 -260 5 645 488 99 109 11 chr15 7898728 7898820 -95596154 + RLTR11A2 LTR ERVK 423 523 -4 5 645 930 242 69 29 chr15 7898879 7899185 -95595789 - Lx8 LINE L1 0 7473 7156 6 645 300 158 35 0 chr15 7899186 7899243 -95595731 + Lx8 LINE L1 7079 7137 -336 6 645 230 233 50 0 chr15 7899364 7899424 -95595550 + Lx9 LINE L1 7419 7481 -163 6 645 1032 63 0 52 chr15 7900095 7900229 -95594745 - B1_Mus2 SINE Alu -18 129 3 6 645 241 250 0 0 chr15 7900588 7900640 -95594334 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 645 387 259 106 29 chr15 7900642 7900813 -95594161 - Lx8 LINE L1 -382 5918 5731 6 645 4816 168 60 14 chr15 7901468 7902408 -95592566 - L1_Mur3 LINE L1 -1048 4832 3850 6 645 4129 199 86 56 chr15 7902405 7903440 -95591534 + Lx7 LINE L1 6631 7696 0 6 645 231 174 22 0 chr15 7904622 7904668 -95590306 - L1M2 LINE L1 -1684 4459 4413 6 645 2124 184 163 11 chr15 7904737 7905302 -95589672 + Lx9 LINE L1 6945 7595 -49 6 645 239 185 19 0 chr15 7905303 7905357 -95589617 - Lx7 LINE L1 -597 7099 7045 6 645 216 262 271 0 chr15 7905816 7905867 -95589107 + ID_B1 SINE B4 87 222 -2 6 645 238 161 89 0 chr15 7905867 7905923 -95589051 + B1_Mur4 SINE Alu 88 148 -2 6 645 359 41 20 0 chr15 7906105 7906154 -95588820 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 645 1229 33 13 0 chr15 7906220 7906371 -95588603 + L1Md_F3 LINE L1 6432 6584 0 6 645 726 269 122 16 chr15 7906733 7906922 -95588052 + B3 SINE B2 5 213 -3 6 645 756 189 226 11 chr15 7908088 7908265 -95586709 - B3 SINE B2 0 216 2 6 645 187 324 0 13 chr15 7908363 7908438 -95586536 - MIR SINE MIR -15 247 174 6 645 231 307 42 35 chr15 7909018 7909160 -95585814 + YREP_Mm Unknown Unknown 158 300 -1512 6 645 702 215 0 0 chr15 7909042 7909163 -95585811 - ID_B1 SINE B4 -10 214 94 6 645 394 316 51 6 chr15 7909430 7909608 -95585366 + L1MB5 LINE L1 5987 6172 -2 6 645 408 170 330 0 chr15 7910370 7910464 -95584510 - RSINE1 SINE B4 -25 140 16 6 645 60 53 0 0 chr15 7910493 7910588 -95584386 + AT_rich Low_complexity Low_complexity 1 95 0 6 645 406 218 419 7 chr15 7910590 7910738 -95584236 - B3 SINE B2 -6 210 2 6 645 280 197 89 38 chr15 7910806 7910885 -95584089 - BC1_Mm scRNA scRNA -69 83 1 6 645 1298 21 0 0 chr15 7910961 7911102 -95583872 + B1_Mus2 SINE Alu 1 141 -6 6 645 858 185 7 7 chr15 7911276 7911423 -95583551 + B1_Mur3 SINE Alu 1 147 -2 6 645 219 243 80 67 chr15 7912374 7912449 -95582525 + B1F SINE Alu 74 149 0 6 645 233 288 84 58 chr15 7912530 7912685 -95582289 + L2 LINE L2 2695 2853 -566 6 645 227 189 0 0 chr15 7913441 7913478 -95581496 + PB1D7 SINE Alu 67 103 -17 6 645 556 290 36 0 chr15 7913489 7913627 -95581347 + B1F SINE Alu 4 146 -3 6 645 488 307 8 124 chr15 7913780 7914029 -95580945 + MIR SINE MIR 42 261 -1 6 645 210 71 0 0 chr15 7914300 7914328 -95580646 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 6 645 249 330 107 0 chr15 7914328 7914431 -95580543 + RSINE1 SINE B4 2 115 -50 6 645 1176 200 35 4 chr15 7914431 7914657 -95580317 + MTC LTR MaLR 1 233 -188 6 645 532 287 98 123 chr15 7914647 7915045 -95579929 + RLTR23 LTR ERV1 39 426 -4 6 645 1382 114 14 28 chr15 7915049 7915265 -95579709 + MTC LTR MaLR 209 421 0 6 645 291 167 0 0 chr15 7915291 7915357 -95579617 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 645 2112 96 209 3 chr15 7915505 7915849 -95579125 + RLTR9F LTR ERVK 1 415 0 6 645 1652 253 156 80 chr15 7916123 7916986 -95577988 + RMER17B LTR ERVK 1 929 -29 6 645 387 0 0 0 chr15 7917117 7917160 -95577814 + (TTGG)n Simple_repeat Simple_repeat 1 43 0 6 645 677 202 0 9 chr15 7917436 7917551 -95577423 + PB1D9 SINE Alu 5 118 -2 6 645 434 101 14 0 chr15 7918216 7918285 -95576689 + (AGGGGG)n Simple_repeat Simple_repeat 6 75 0 6 645 183 184 0 0 chr15 7918284 7918322 -95576652 + GA-rich Low_complexity Low_complexity 1 38 0 6 645 253 317 0 0 chr15 7918336 7918396 -95576578 + (CGTG)n Simple_repeat Simple_repeat 3 62 0 6 645 244 139 0 0 chr15 7918415 7918451 -95576523 + B3A SINE B2 10 45 -153 6 645 25 31 0 0 chr15 7918451 7918483 -95576491 + AT_rich Low_complexity Low_complexity 1 32 0 6 645 272 248 45 82 chr15 7918626 7918736 -95576238 + B3A SINE B2 84 192 -6 6 645 525 321 113 61 chr15 7918742 7919220 -95575754 + MLT1D LTR MaLR 3 505 0 6 645 941 286 36 14 chr15 7919267 7919547 -95575427 + B4A SINE B4 6 291 -1 6 645 247 256 115 11 chr15 7919609 7919696 -95575278 + B1F2 SINE Alu 52 147 -2 6 645 914 235 162 19 chr15 7919739 7920047 -95574927 - ORR1D2 LTR MaLR -18 352 1 6 645 467 308 116 20 chr15 7920050 7920249 -95574725 + MIR SINE MIR 31 248 -14 6 645 218 266 94 21 chr15 7920468 7920564 -95574410 + MIR SINE MIR 156 258 -4 6 645 765 221 7 0 chr15 7921611 7921751 -95573223 + B1_Mur4 SINE Alu 1 141 -9 6 645 192 97 0 0 chr15 7921751 7921782 -95573192 + (CAA)n Simple_repeat Simple_repeat 2 32 0 6 645 315 0 0 0 chr15 7921833 7921868 -95573106 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 645 718 320 15 42 chr15 7921989 7922253 -95572721 + B4 SINE B4 31 287 -5 6 645 39 50 0 0 chr15 7923274 7923334 -95571640 + AT_rich Low_complexity Low_complexity 1 60 0 6 645 848 245 58 19 chr15 7924489 7924697 -95570277 - B3 SINE B2 0 216 1 6 645 1627 157 80 10 chr15 7924746 7925048 -95569926 + ORR1B2 LTR MaLR 2 324 -43 6 645 216 0 0 0 chr15 7925749 7925773 -95569201 + (A)n Simple_repeat Simple_repeat 1 24 0 6 645 268 167 0 0 chr15 7925773 7925815 -95569159 + ORR1B2 LTR MaLR 312 353 -14 6 645 190 324 29 0 chr15 7925835 7925903 -95569071 + MIR SINE MIR 191 260 -2 6 645 380 213 279 16 chr15 7925961 7926090 -95568884 + RSINE1 SINE B4 3 165 0 6 645 26 30 0 0 chr15 7926376 7926409 -95568565 + AT_rich Low_complexity Low_complexity 1 33 0 6 645 795 179 0 88 chr15 7926788 7926947 -95568027 + B1_Mus2 SINE Alu 3 147 0 6 645 333 343 34 34 chr15 7927817 7927995 -95566979 + L1M4b LINE L1 2291 2468 -4866 6 645 1109 101 12 0 chr15 7928070 7928239 -95566735 + (GGAA)n Simple_repeat Simple_repeat 3 173 0 6 645 443 251 112 12 chr15 7928605 7928774 -95566200 - L1MC LINE L1 -740 5439 5254 6 645 342 0 0 0 chr15 7928784 7928822 -95566152 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 6 645 224 229 111 32 chr15 7928846 7928909 -95566065 - ID4 SINE ID -14 69 2 6 645 22 0 0 0 chr15 7928977 7928999 -95565975 + AT_rich Low_complexity Low_complexity 1 22 0 6 645 577 281 28 65 chr15 7929034 7929251 -95565723 + B3 SINE B2 2 210 -6 6 645 373 333 10 0 chr15 7929342 7929438 -95565536 - ID_B1 SINE B4 -121 103 7 6 645 375 282 50 44 chr15 7929483 7929738 -95565236 - L1MC LINE L1 -1046 5100 4844 6 645 351 279 49 49 chr15 7929929 7930073 -95564901 + MIRb SINE MIR 114 261 -7 6 645 1321 211 37 40 chr15 7930905 7931226 -95563748 - Lx9 LINE L1 -1666 5978 5659 6 645 1685 42 16 0 chr15 7931276 7931467 -95563507 + B2_Mm2 SINE B2 2 195 0 6 645 650 220 7 90 chr15 7931471 7931511 -95563463 + RSINE1 SINE B4 17 49 -116 6 645 8320 52 15 12 chr15 7931511 7932501 -95562473 + L1Md_F2 LINE L1 5590 6582 0 6 645 650 220 7 90 chr15 7932501 7932605 -95562369 + RSINE1 SINE B4 50 149 -16 6 645 1630 191 115 3 chr15 7933869 7934199 -95560775 + ORR1B2 LTR MaLR 1 367 0 6 645 470 323 66 11 chr15 7934647 7934812 -95560162 - ID_B1 SINE B4 -122 170 1 6 645 267 31 0 0 chr15 7935512 7935544 -95559430 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 645 210 91 0 0 chr15 7935544 7935577 -95559397 + (GA)n Simple_repeat Simple_repeat 2 34 0 6 645 312 305 118 8 chr15 7935579 7935698 -95559276 - RSINE1 SINE B4 -31 134 3 6 645 201 278 0 0 chr15 7935717 7935771 -95559203 + (TAAA)n Simple_repeat Simple_repeat 1 54 0 6 645 604 264 41 26 chr15 7935963 7936157 -95558817 - B3A SINE B2 0 198 2 6 645 237 65 0 0 chr15 7936965 7936996 -95557978 + (TCTCCC)n Simple_repeat Simple_repeat 6 36 0 6 645 414 0 0 0 chr15 7936997 7937043 -95557931 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 645 498 198 0 11 chr15 7937299 7937386 -95557588 - B1_Mur1 SINE Alu -16 133 48 6 645 216 398 37 0 chr15 7937422 7937530 -95557444 - L2a LINE L2 -1 3425 3314 6 645 200 235 12 36 chr15 7937938 7937960 -95557014 + A-rich Low_complexity Low_complexity 1 20 0 6 645 954 84 122 0 chr15 7937960 7938091 -95556883 + B1_Mus1 SINE Alu 2 148 0 6 645 200 235 12 36 chr15 7938091 7938152 -95556822 + A-rich Low_complexity Low_complexity 21 82 0 6 645 576 350 79 45 chr15 7938954 7939310 -95555664 + LTR16B1 LTR ERVL 10 377 -103 6 645 640 126 15 19 chr15 7939361 7939477 -95555497 - B1_Mur4 SINE Alu -2 148 1 6 645 495 215 89 16 chr15 7939825 7939948 -95555026 - B1_Mur1 SINE Alu -16 133 2 6 645 1443 174 63 0 chr15 7939957 7940210 -95554764 + MTC LTR MaLR 153 421 0 6 645 700 251 153 42 chr15 7940816 7941078 -95553896 - B4 SINE B4 0 292 2 6 645 569 202 0 81 chr15 7944988 7945112 -95549862 - RSINE1 SINE B4 -21 144 31 7 645 698 233 47 0 chr15 7945178 7945350 -95549624 + B3A SINE B2 3 182 -16 7 645 186 43 0 0 chr15 7945375 7945398 -95549576 + (A)n Simple_repeat Simple_repeat 1 23 0 7 645 320 305 83 24 chr15 7945481 7945686 -95549288 + L1MB7 LINE L1 5945 6161 -23 7 645 609 221 59 18 chr15 7946737 7946907 -95548067 + ID_B1 SINE B4 1 177 -47 7 645 209 160 60 0 chr15 7946915 7946965 -95548009 + GA-rich Low_complexity Low_complexity 1 53 0 7 645 25 31 0 0 chr15 7947220 7947252 -95547722 + AT_rich Low_complexity Low_complexity 1 32 0 7 645 22 0 0 0 chr15 7947390 7947412 -95547562 + AT_rich Low_complexity Low_complexity 1 22 0 7 645 207 226 0 43 chr15 7947873 7948012 -95546962 + (CA)n Simple_repeat Simple_repeat 1 133 0 7 645 1059 284 32 44 chr15 7948013 7948585 -95546389 - L1_Rod LINE L1 -536 5761 5188 7 645 487 274 26 10 chr15 7948603 7948795 -95546179 + L1_Rod LINE L1 4814 5008 -839 7 645 506 209 0 91 chr15 7949591 7949712 -95545262 - PB1D10 SINE Alu -6 111 2 7 645 330 232 14 14 chr15 7950304 7950374 -95544600 - B4 SINE B4 0 292 223 7 645 390 286 114 0 chr15 7950391 7950496 -95544478 - B4A SINE B4 -173 119 3 7 645 522 0 0 0 chr15 7950518 7950576 -95544398 + (CTTTG)n Simple_repeat Simple_repeat 2 59 0 7 645 768 217 18 44 chr15 7950687 7950894 -95544080 + B3 SINE B2 16 216 0 7 645 285 296 36 5 chr15 7951072 7951168 -95543806 + LTR48B LTR ERV1 4 99 -523 7 645 248 226 0 19 chr15 7951198 7951252 -95543722 + LTR48B LTR ERV1 184 236 -408 7 645 24 32 0 0 chr15 7951865 7951896 -95543078 + AT_rich Low_complexity Low_complexity 1 31 0 7 645 236 280 100 17 chr15 7952698 7952818 -95542156 + MER2 DNA MER2_type 132 261 -84 7 645 359 358 66 26 chr15 7952916 7953068 -95541906 + RSINE1 SINE B4 8 165 0 7 645 294 143 0 0 chr15 7953069 7953118 -95541856 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 645 1017 131 11 33 chr15 7954684 7954866 -95540108 + B2_Mm2 SINE B2 2 179 -16 7 645 254 151 38 0 chr15 7954883 7954936 -95540038 + G-rich Low_complexity Low_complexity 1 55 0 7 645 180 111 0 0 chr15 7954958 7954985 -95539989 + (A)n Simple_repeat Simple_repeat 1 27 0 7 645 232 240 147 0 chr15 7954985 7955060 -95539914 - Charlie1a DNA MER1_type -373 1082 997 7 645 318 282 96 27 chr15 7955174 7955320 -95539654 - Charlie1a DNA MER1_type -746 709 554 7 645 268 64 43 0 chr15 7955399 7955446 -95539528 + (TA)n Simple_repeat Simple_repeat 2 50 0 7 645 615 257 108 88 chr15 7955619 7955879 -95539095 - Charlie1a DNA MER1_type -1156 299 35 7 645 495 214 10 0 chr15 7956493 7956591 -95538383 + B1F SINE Alu 51 149 0 7 645 1588 36 0 20 chr15 7956731 7956928 -95538046 + B2_Mm1t SINE B2 1 193 0 7 645 686 174 36 7 chr15 7957067 7957206 -95537768 - B1F SINE Alu -2 147 5 7 645 231 105 33 50 chr15 7957226 7957286 -95537688 + (TATAA)n Simple_repeat Simple_repeat 1 59 0 7 645 710 178 7 15 chr15 7957326 7957463 -95537511 + B1_Mur4 SINE Alu 1 136 -14 7 645 234 320 39 26 chr15 7960414 7960491 -95534483 + B4 SINE B4 215 292 0 7 645 795 245 0 46 chr15 7960592 7960789 -95534185 + B3A SINE B2 1 188 -10 7 645 728 253 255 41 chr15 7961078 7961693 -95533281 + Lx8 LINE L1 6719 7464 -9 7 645 274 244 16 73 chr15 7962107 7962231 -95532743 + PB1 SINE Alu 1 117 -10 7 645 234 143 15 31 chr15 7962806 7962871 -95532103 + GA-rich Low_complexity Low_complexity 1 64 0 7 645 27 0 0 0 chr15 7963592 7963619 -95531355 + AT_rich Low_complexity Low_complexity 1 27 0 7 645 249 207 64 75 chr15 7964679 7964773 -95530201 - MLT1H LTR MaLR -209 340 248 7 645 250 291 12 12 chr15 7964822 7964902 -95530072 - MLT1H LTR MaLR -415 134 55 7 645 380 231 156 37 chr15 7964968 7965103 -95529871 + RSINE1 SINE B4 11 161 -4 7 645 708 236 10 61 chr15 7966743 7966941 -95528033 + B3A SINE B2 1 188 -10 7 645 500 364 53 26 chr15 7966959 7967261 -95527713 - MLT1B LTR MaLR -31 359 50 7 645 333 0 0 0 chr15 7968240 7968277 -95526697 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 645 321 314 119 21 chr15 7968731 7968750 -95526224 - RSINE1 SINE B4 -6 159 143 7 645 216 0 0 0 chr15 7968750 7968774 -95526200 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 645 321 314 119 21 chr15 7968774 7968897 -95526077 - RSINE1 SINE B4 -23 142 3 7 645 343 309 137 9 chr15 7969037 7969249 -95525725 - L4 LINE RTE -1569 460 222 7 645 795 87 13 32 chr15 7970420 7970575 -95524399 + RMER17B LTR ERVK 309 460 -498 7 645 1221 102 11 21 chr15 7971054 7971245 -95523729 + B2_Mm1t SINE B2 1 189 -4 7 645 765 73 48 24 chr15 7971746 7971872 -95523102 - RLTR15 LTR ERVK -230 129 1 7 645 666 272 113 18 chr15 7972146 7972483 -95522491 + Lx9 LINE L1 7069 7437 -207 7 645 200 133 44 0 chr15 7972546 7972591 -95522383 + (TCTG)n Simple_repeat Simple_repeat 4 50 0 7 645 345 311 98 11 chr15 7972728 7972962 -95522012 + MLT1E3 LTR MaLR 201 496 -9 7 645 474 311 51 20 chr15 7972993 7973190 -95521784 + L1MC4 LINE L1 6370 6572 -1470 7 645 239 273 92 15 chr15 7973393 7973523 -95521451 + L1MC4 LINE L1 6925 7064 -978 7 645 1071 106 0 27 chr15 7973606 7973791 -95521183 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 7 645 621 259 34 34 chr15 7973917 7974153 -95520821 + L1MC4 LINE L1 7171 7406 -636 7 645 1452 256 57 21 chr15 7974214 7974692 -95520282 + Lx7 LINE L1 6816 7310 -386 7 645 192 158 0 0 chr15 7974731 7974769 -95520205 + T-rich Low_complexity Low_complexity 3 40 0 7 645 282 338 200 0 chr15 7975617 7975777 -95519197 + MLT1E3-int LTR MaLR 623 814 -675 7 645 793 312 92 56 chr15 7975773 7976133 -95518841 + MLT1E3 LTR MaLR 252 624 0 7 645 879 261 36 5 chr15 7976432 7976655 -95518319 + B4A SINE B4 1 230 -62 7 645 1969 67 4 0 chr15 7976656 7976911 -95518063 + L1_Mus2 LINE L1 6311 6566 0 7 645 200 35 35 0 chr15 7976957 7976986 -95517988 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 7 645 376 295 21 21 chr15 7976988 7977085 -95517889 - PB1D10 SINE Alu -20 97 1 7 645 361 284 135 11 chr15 7977271 7977449 -95517525 + L1MC4a LINE L1 6408 6607 -1275 7 645 303 190 0 0 chr15 7977494 7977554 -95517420 + L1MC4a LINE L1 6675 6767 -1115 7 645 774 197 117 20 chr15 7977580 7977777 -95517197 + B3 SINE B2 1 216 0 7 645 429 304 0 38 chr15 7977806 7977912 -95517062 + B1_Mur2 SINE Alu 5 106 -43 7 645 312 27 0 0 chr15 7977927 7977964 -95517010 + (TC)n Simple_repeat Simple_repeat 2 38 0 7 645 243 253 75 12 chr15 7978255 7978335 -95516639 + MamRep1879 DNA hAT? 13 97 -119 7 645 192 111 0 0 chr15 7978661 7978697 -95516277 + (A)n Simple_repeat Simple_repeat 1 36 0 7 645 312 91 0 0 chr15 7978792 7978836 -95516138 + (A)n Simple_repeat Simple_repeat 1 44 0 7 645 664 248 0 0 chr15 7979002 7979147 -95515827 + B1_Mus1 SINE Alu 2 146 -2 7 645 770 206 8 0 chr15 7979151 7979282 -95515692 + B1_Mur4 SINE Alu 1 132 -18 7 645 352 79 63 0 chr15 7979294 7979357 -95515617 + (GAAAA)n Simple_repeat Simple_repeat 3 69 0 7 645 968 132 21 0 chr15 7979359 7979503 -95515471 + B1_Mus2 SINE Alu 1 147 0 7 645 407 19 19 0 chr15 7979504 7979556 -95515418 + (GAAA)n Simple_repeat Simple_repeat 3 55 0 7 645 2610 169 28 10 chr15 7979603 7980100 -95514874 + RLTR19C LTR ERVK 1 506 0 7 645 21 0 0 0 chr15 7980435 7980456 -95514518 + AT_rich Low_complexity Low_complexity 1 21 0 7 645 327 269 129 15 chr15 7981556 7981688 -95513286 + RMER15 LTR ERVL 416 562 -13 7 645 488 248 20 7 chr15 7981975 7982121 -95512853 - B1F SINE Alu -1 148 1 7 645 345 218 160 47 chr15 7982223 7982329 -95512645 + PB1D7 SINE Alu 3 120 0 7 645 318 328 86 14 chr15 7982332 7982471 -95512503 + RSINE1 SINE B4 5 153 -12 7 645 336 24 0 0 chr15 7982500 7982541 -95512433 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 645 23 54 0 0 chr15 7982875 7982912 -95512062 + AT_rich Low_complexity Low_complexity 1 37 0 7 645 453 310 7 27 chr15 7983077 7983223 -95511751 - RSINE1 SINE B4 0 165 23 7 645 1691 154 128 0 chr15 7983230 7983542 -95511432 + ORR1B2 LTR MaLR 7 358 -9 7 645 3659 38 71 17 chr15 7983626 7983810 -95511164 + L1Md_F3 LINE L1 6082 6289 -295 7 645 1432 53 27 0 chr15 7983810 7983969 -95511005 + B2_Mm1a SINE B2 2 160 -33 7 645 207 0 0 0 chr15 7983969 7983992 -95510982 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 7 645 1432 53 27 0 chr15 7983992 7984019 -95510955 + B2_Mm1a SINE B2 161 192 -1 7 645 3659 38 71 17 chr15 7984019 7984311 -95510663 + L1Md_F3 LINE L1 6290 6584 0 7 645 21 0 0 0 chr15 7984336 7984357 -95510617 + AT_rich Low_complexity Low_complexity 1 21 0 7 645 1117 259 35 35 chr15 7984593 7984881 -95510093 + MER82 DNA MER2_type 101 388 -265 7 645 267 215 0 0 chr15 7985455 7985520 -95509454 + GA-rich Low_complexity Low_complexity 1 65 0 7 645 206 62 31 0 chr15 7985574 7985606 -95509368 + (GGGA)n Simple_repeat Simple_repeat 1 33 0 7 645 232 325 0 13 chr15 7985614 7985692 -95509282 + GA-rich Low_complexity Low_complexity 1 77 0 7 645 441 300 33 8 chr15 7986194 7986315 -95508659 + RSINE1 SINE B4 34 157 -8 7 645 288 0 0 0 chr15 7986317 7986349 -95508625 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 645 748 143 0 0 chr15 7986815 7986927 -95508047 - B1_Mur3 SINE Alu -20 129 18 7 645 219 123 17 50 chr15 7986934 7986994 -95507980 + CT-rich Low_complexity Low_complexity 3 60 0 7 645 457 245 101 13 chr15 7987038 7987187 -95507787 + LTR41 LTR ERVL 471 632 -136 7 645 295 277 53 23 chr15 7988244 7988349 -95506625 + MIRc SINE MIR 11 116 -92 7 645 250 250 54 0 chr15 7988448 7988504 -95506470 + MIRb SINE MIR 120 178 -90 7 645 937 244 50 0 chr15 7988534 7988735 -95506239 + B3 SINE B2 1 211 -5 7 645 864 180 136 11 chr15 7988735 7988983 -95505991 + Lx3C LINE L1 6668 7037 -21 7 645 267 54 0 0 chr15 7988983 7989020 -95505954 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 7 645 469 226 212 6 chr15 7989067 7989232 -95505742 + B3 SINE B2 2 200 -16 7 645 25 31 0 0 chr15 7989241 7989273 -95505701 + AT_rich Low_complexity Low_complexity 1 32 0 7 645 490 250 181 0 chr15 7989942 7990086 -95504888 + B3A SINE B2 1 170 -28 8 645 375 218 76 46 chr15 7990709 7990828 -95504146 - ORR1D1 LTR MaLR -5 369 234 8 645 1535 217 195 11 chr15 7990828 7991290 -95503684 + RMER4B LTR ERVK 28 574 -11 8 645 1172 75 0 0 chr15 7991385 7991531 -95503443 - B1_Mus2 SINE Alu 0 147 2 8 645 573 138 0 0 chr15 7991597 7991691 -95503283 + (CATA)n Simple_repeat Simple_repeat 3 96 0 8 645 270 252 67 121 chr15 7991910 7992008 -95502966 - LTR82A LTR ERVL -714 158 56 8 645 751 238 0 7 chr15 7992008 7992156 -95502818 + B1_Mur2 SINE Alu 1 147 -2 8 645 270 252 67 121 chr15 7992156 7992206 -95502768 - LTR82A LTR ERVL -817 55 18 8 645 476 296 25 6 chr15 7992287 7992447 -95502527 + RSINE1 SINE B4 3 165 0 8 645 21 57 0 0 chr15 7992574 7992609 -95502365 + AT_rich Low_complexity Low_complexity 1 35 0 8 645 617 11 33 11 chr15 7993049 7993140 -95501834 + (TG)n Simple_repeat Simple_repeat 2 94 0 8 645 445 338 129 0 chr15 7993141 7993280 -95501694 + B4A SINE B4 132 288 -4 8 645 189 0 0 0 chr15 7993307 7993328 -95501646 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 645 684 170 18 0 chr15 7993354 7993466 -95501508 + PB1D9 SINE Alu 1 114 -6 8 645 462 179 0 0 chr15 7993472 7993567 -95501407 + GA-rich Low_complexity Low_complexity 4 98 0 8 645 286 259 68 51 chr15 7993817 7993935 -95501039 - PB1D9 SINE Alu 0 120 1 8 645 27 29 0 0 chr15 7994252 7994286 -95500688 + AT_rich Low_complexity Low_complexity 1 34 0 8 645 310 200 57 0 chr15 7994395 7994500 -95500474 - Lx9 LINE L1 -35 7609 7499 8 645 25 75 0 0 chr15 7994752 7994805 -95500169 + AT_rich Low_complexity Low_complexity 1 53 0 8 645 1315 37 0 6 chr15 7994862 7995021 -95499953 + B2_Mm1t SINE B2 2 160 -33 8 645 273 29 0 0 chr15 7995021 7995055 -95499919 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 8 645 283 230 9 48 chr15 7995129 7995247 -95499727 + L1M4 LINE L1 2975 3088 -3058 8 80 505 146 0 0 chr15 7995320 7995402 -95499572 + B1_Mur4 SINE Alu 69 150 0 8 646 428 281 74 12 chr15 7995407 7995569 -95499405 + L1M4 LINE L1 3144 3315 -2831 8 646 515 16 16 0 chr15 7996291 7996355 -95498619 + (TG)n Simple_repeat Simple_repeat 2 66 0 8 646 257 273 0 0 chr15 7996659 7996714 -95498260 - B1F SINE Alu -94 55 1 8 646 186 43 0 0 chr15 7996839 7996862 -95498112 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 8 646 518 218 74 13 chr15 7996880 7997029 -95497945 + RSINE1 SINE B4 4 161 -4 8 646 1185 103 29 0 chr15 7997304 7997479 -95497495 + B2_Mm2 SINE B2 2 181 -14 8 646 405 96 316 8 chr15 7997525 7997628 -95497346 + B2_Mm2 SINE B2 50 187 -8 8 646 338 80 0 0 chr15 7997663 7997739 -95497235 + L1_Mus2 LINE L1 6512 6566 0 8 646 24 32 0 0 chr15 7997820 7997851 -95497123 + AT_rich Low_complexity Low_complexity 1 31 0 8 646 381 297 52 35 chr15 7998307 7998422 -95496552 + B1F SINE Alu 1 117 -32 8 646 411 39 0 0 chr15 7999888 7999940 -95495034 - B2_Mm2 SINE B2 -142 53 2 8 646 201 125 0 0 chr15 8000000 8000022 -95494952 + (A)n Simple_repeat Simple_repeat 1 22 0 1 646 947 61 113 8 chr15 8000022 8000155 -95494819 + B1_Mm SINE Alu 1 147 0 2 646 201 125 0 0 chr15 8000155 8000172 -95494802 + (A)n Simple_repeat Simple_repeat 1 17 0 3 646 1882 215 119 40 chr15 8000419 8000898 -95494076 + Lx6 LINE L1 6859 7375 -85 4 646 33 25 0 0 chr15 8000916 8000956 -95494018 + AT_rich Low_complexity Low_complexity 1 40 0 5 646 644 249 149 48 chr15 8001215 8001510 -95493464 + MTE2a LTR MaLR 52 376 -3 6 646 570 326 14 0 chr15 8002017 8002164 -95492810 + B3 SINE B2 11 159 -57 7 646 533 311 145 35 chr15 8002395 8002795 -95492179 + L1MB7 LINE L1 763 1206 -5427 8 646 303 227 0 0 chr15 8003077 8003143 -95491831 + B1_Mur4 SINE Alu 80 145 -5 9 646 328 292 70 85 chr15 8003154 8003296 -95491678 + L1MB7 LINE L1 1590 1731 -4902 8 646 1057 116 0 0 chr15 8003296 8003443 -95491531 + B1_Mus1 SINE Alu 2 148 0 1 646 328 292 70 85 chr15 8003443 8003629 -95491345 + L1MB7 LINE L1 1732 1913 -4720 8 646 1216 41 0 7 chr15 8003749 8003895 -95491079 + B1_Mus2 SINE Alu 2 146 -1 1 646 207 0 0 0 chr15 8003903 8003926 -95491048 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 646 216 310 58 29 chr15 8003990 8004093 -95490881 + BC1_Mm scRNA scRNA 2 107 -45 1 646 256 281 15 30 chr15 8004094 8004226 -95490748 + GA-rich Low_complexity Low_complexity 1 130 0 1 646 231 250 50 0 chr15 8004226 8004286 -95490688 + L1MB7 LINE L1 1949 2011 -4622 8 646 1130 58 13 0 chr15 8004308 8004462 -95490512 + (GAAA)n Simple_repeat Simple_repeat 2 157 0 1 646 198 0 0 0 chr15 8004463 8004485 -95490489 + (CAGC)n Simple_repeat Simple_repeat 1 22 0 1 646 1020 58 0 0 chr15 8004485 8004623 -95490351 + B1_Mus2 SINE Alu 10 147 0 1 646 600 212 0 0 chr15 8004636 8004768 -95490206 + GA-rich Low_complexity Low_complexity 2 133 0 1 646 225 342 75 70 chr15 8004799 8005000 -95489974 + B4 SINE B4 91 292 0 1 646 544 324 130 0 chr15 8005247 8005463 -95489511 - Tigger7 DNA MER2_type -2247 244 1 2 646 387 273 185 25 chr15 8005860 8006030 -95488944 - B3 SINE B2 -1 192 9 2 646 745 236 75 0 chr15 8006067 8006266 -95488708 + B3 SINE B2 3 216 0 2 646 640 58 0 0 chr15 8006290 8006373 -95488601 - LTRIS_Mus LTR ERV1 0 587 505 2 646 2334 114 22 84 chr15 8006373 8006901 -95488073 + RLTR1B LTR ERV1 1 512 0 2 646 3019 45 2 2 chr15 8006903 8007304 -95487670 - LTRIS_Mm LTR ERV1 -81 401 1 2 646 402 205 0 0 chr15 8007359 8007437 -95487537 + B3 SINE B2 1 78 -138 2 646 229 273 15 15 chr15 8007662 8007729 -95487245 - B3A SINE B2 -22 176 110 2 646 4477 91 53 30 chr15 8007799 8008576 -95486398 - RLTR13C2 LTR ERVK 0 1033 1 2 646 1174 270 97 35 chr15 8008578 8009067 -95485907 + L1MB7 LINE L1 5612 6133 -442 8 646 1361 99 15 20 chr15 8009067 8009262 -95485712 + B2_Mm2 SINE B2 1 194 -1 2 646 1174 273 104 43 chr15 8009262 8009495 -95485479 + L1MB7 LINE L1 6134 6382 -193 8 646 446 228 148 87 chr15 8009560 8009599 -95485375 + B3A SINE B2 2 35 -163 3 646 408 48 0 0 chr15 8009599 8009661 -95485313 + L1Md_F2 LINE L1 6521 6582 0 3 646 446 228 148 87 chr15 8009661 8009804 -95485170 + B3A SINE B2 36 195 -3 3 646 243 292 5 0 chr15 8010509 8010580 -95484394 + B1F2 SINE Alu 1 73 -44 3 646 450 197 109 47 chr15 8010605 8010733 -95484241 + RSINE1 SINE B4 30 165 0 3 646 198 0 0 0 chr15 8010853 8010875 -95484099 + (CAA)n Simple_repeat Simple_repeat 2 23 0 3 646 316 230 0 65 chr15 8010887 8010980 -95483994 + B1_Mur1 SINE Alu 38 124 -25 3 646 816 178 20 0 chr15 8011097 8011243 -95483731 + B1_Mur4 SINE Alu 2 150 0 3 646 421 222 0 0 chr15 8011605 8011677 -95483297 + B4A SINE B4 8 79 -213 3 646 4253 25 6 0 chr15 8011705 8012195 -95482779 + L1Md_F2 LINE L1 6090 6582 0 3 646 383 256 18 1 chr15 8012594 8012733 -95482241 + PB1D10 SINE Alu 3 148 0 3 646 362 278 56 0 chr15 8013444 8013570 -95481404 - ID_B1 SINE B4 -1 223 91 4 646 286 315 118 52 chr15 8013925 8014106 -95480868 + B4A SINE B4 1 209 -83 4 646 216 0 0 0 chr15 8014106 8014130 -95480844 + (TGAG)n Simple_repeat Simple_repeat 3 26 0 4 646 286 315 118 52 chr15 8014130 8014219 -95480755 + B4A SINE B4 210 289 -3 4 646 226 289 13 0 chr15 8014513 8014589 -95480385 - L2a LINE L2 0 3426 3350 4 646 209 392 35 20 chr15 8014823 8015026 -95479948 - L2 LINE L2 -405 3014 2809 4 646 234 280 158 10 chr15 8015228 8015329 -95479645 + PB1D10 SINE Alu 2 117 0 4 646 258 246 74 33 chr15 8015664 8015786 -95479188 + RSINE1 SINE B4 34 160 -5 4 646 237 267 0 26 chr15 8016883 8016960 -95478014 + RMER10A LTR ERVL 343 417 -25 4 646 1207 68 0 0 chr15 8017009 8017156 -95477818 + B1_Mus2 SINE Alu 1 147 0 4 646 247 88 0 241 chr15 8017303 8017839 -95477135 + (CAGTG)n Simple_repeat Simple_repeat 1 406 0 4 646 2154 129 85 3 chr15 8018140 8018528 -95476446 - RLTR28 LTR ERVL -13 511 92 5 646 1372 63 29 0 chr15 8018528 8018703 -95476271 + B2_Mm2 SINE B2 2 181 -14 5 646 298 111 19 0 chr15 8018750 8018803 -95476171 + B2_Mm2 SINE B2 58 116 -82 5 646 183 42 0 0 chr15 8018819 8018843 -95476131 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 5 646 268 190 114 0 chr15 8018856 8018935 -95476039 - RLTR28 LTR ERVL -419 105 18 5 646 424 183 87 30 chr15 8019035 8019170 -95475804 - MTC LTR MaLR -255 152 3 5 646 1186 105 5 91 chr15 8019607 8019771 -95475203 + B2_Mm2 SINE B2 4 153 -42 5 646 1195 48 0 0 chr15 8019771 8019917 -95475057 - B1_Mus2 SINE Alu 0 147 2 5 646 1186 105 5 91 chr15 8019917 8019962 -95475012 + B2_Mm2 SINE B2 154 195 0 5 646 728 116 23 17 chr15 8020333 8020508 -95474466 + (TG)n Simple_repeat Simple_repeat 1 176 0 5 646 350 226 10 70 chr15 8020513 8020613 -95474361 - PB1 SINE Alu -5 122 29 5 646 583 184 128 0 chr15 8020610 8020735 -95474239 - B3 SINE B2 -75 141 1 5 646 3179 44 13 5 chr15 8021157 8021548 -95473426 + MTA_Mm LTR MaLR 3 396 0 6 646 7535 72 13 71 chr15 8021548 8021931 -95473043 + MTA_Mm-int LTR MaLR 1 391 -707 6 646 1345 91 27 0 chr15 8021931 8022118 -95472856 + B2_Mm1t SINE B2 2 193 0 6 646 7535 72 13 71 chr15 8022118 8022900 -95472074 + MTA_Mm-int LTR MaLR 392 1098 0 6 646 3320 36 5 8 chr15 8022900 8023297 -95471677 + MTA_Mm LTR MaLR 1 396 0 6 646 394 278 46 0 chr15 8023946 8024054 -95470920 - B1F1 SINE Alu -28 121 9 6 646 737 197 0 27 chr15 8024421 8024567 -95470407 + B1_Mur4 SINE Alu 9 150 0 6 646 772 66 0 0 chr15 8024692 8024798 -95470176 - B1_Mus2 SINE Alu 0 147 42 6 646 902 113 35 7 chr15 8024928 8025071 -95469903 + B1_Mus2 SINE Alu 1 147 0 6 646 5811 119 60 22 chr15 8025402 8026493 -95468481 + MTC-int LTR MaLR 2 1134 -124 6 646 1591 26 26 0 chr15 8027093 8027282 -95467692 + B2_Mm2 SINE B2 2 195 0 6 646 247 355 32 0 chr15 8027441 8027565 -95467409 - MLT1A LTR MaLR -5 369 242 6 646 353 307 26 9 chr15 8027657 8027772 -95467202 - PB1D10 SINE Alu 0 117 1 6 646 234 322 44 11 chr15 8027825 8027916 -95467058 - MLT1A LTR MaLR -261 104 11 6 646 301 343 62 19 chr15 8028180 8028436 -95466538 - L1M5 LINE L1 -3632 2514 2248 7 646 305 253 13 0 chr15 8028728 8028807 -95466167 + ID4_ SINE ID 1 80 -3 7 646 24 0 0 0 chr15 8028844 8028868 -95466106 + AT_rich Low_complexity Low_complexity 1 24 0 7 646 560 224 107 13 chr15 8028880 8029029 -95465945 - RSINE1 SINE B4 0 165 3 7 646 215 271 0 33 chr15 8029560 8029621 -95465353 + B1_Mus2 SINE Alu 6 64 -83 7 646 21 36 0 0 chr15 8029854 8029882 -95465092 + AT_rich Low_complexity Low_complexity 1 28 0 7 646 1192 49 0 0 chr15 8029908 8030052 -95464922 + B1_Mus1 SINE Alu 5 148 0 7 646 188 163 0 23 chr15 8030066 8030110 -95464864 + GA-rich Low_complexity Low_complexity 3 45 0 7 646 991 125 7 0 chr15 8030347 8030491 -95464483 - B1_Mus2 SINE Alu -1 146 2 7 646 180 0 0 0 chr15 8030748 8030768 -95464206 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 7 646 272 27 27 0 chr15 8030768 8030805 -95464169 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 8 646 1160 36 0 0 chr15 8030805 8030942 -95464032 - B1_Mus2 SINE Alu -9 138 2 8 646 329 240 190 0 chr15 8031014 8031114 -95463860 - PB1D9 SINE Alu 0 120 2 8 646 816 211 0 13 chr15 8031299 8031448 -95463526 + B1_Mur2 SINE Alu 1 147 -2 8 646 296 365 0 9 chr15 8031482 8031590 -95463384 + PB1D7 SINE Alu 6 112 -8 8 646 285 296 37 0 chr15 8031733 8031814 -95463160 + B1F2 SINE Alu 1 84 -65 8 646 379 161 21 11 chr15 8032017 8032111 -95462863 + Lx2 LINE L1 6903 6997 0 8 646 355 191 188 17 chr15 8032800 8032917 -95462057 + B1_Mur2 SINE Alu 6 142 -7 8 646 328 273 50 57 chr15 8032907 8033066 -95461908 + B3A SINE B2 41 198 0 8 646 719 170 58 22 chr15 8033206 8033344 -95461630 - B1_Mus1 SINE Alu 0 148 6 8 646 313 306 34 27 chr15 8033352 8033500 -95461474 - B1_Mur1 SINE Alu 0 149 1 9 646 816 211 151 65 chr15 8033500 8033870 -95461104 + L1MB2 LINE L1 5659 6060 -111 9 646 1047 116 53 42 chr15 8033924 8034113 -95460861 + B2_Mm2 SINE B2 1 191 -4 9 646 412 212 212 36 chr15 8034114 8034251 -95460723 + RSINE1 SINE B4 2 162 -3 9 646 318 50 0 0 chr15 8034252 8034292 -95460682 + (CAAT)n Simple_repeat Simple_repeat 1 40 0 9 646 761 149 15 22 chr15 8034314 8034451 -95460523 + B1_Mur4 SINE Alu 1 136 -14 9 646 325 319 43 43 chr15 8034487 8034628 -95460346 + B4A SINE B4 55 195 -97 9 646 496 280 42 0 chr15 8034646 8034789 -95460185 + B1_Mur3 SINE Alu 1 149 0 9 646 180 77 0 0 chr15 8034867 8034893 -95460081 + (CA)n Simple_repeat Simple_repeat 1 26 0 9 646 444 292 26 0 chr15 8034918 8035031 -95459943 + PB1D10 SINE Alu 2 117 0 9 646 1137 88 0 0 chr15 8035040 8035187 -95459787 + B1_Mus1 SINE Alu 2 148 0 1 646 1564 17 0 0 chr15 8035901 8036073 -95458901 - B2_Mm1a SINE B2 -18 175 4 1 646 306 289 0 0 chr15 8036099 8036175 -95458799 + B1F SINE Alu 16 91 -58 1 646 1319 112 0 11 chr15 8036177 8036366 -95458608 + B2_Mm2 SINE B2 2 188 -7 1 646 1133 61 0 26 chr15 8036379 8036530 -95458444 - B1_Mus2 SINE Alu 0 147 1 1 646 246 224 45 0 chr15 8036787 8036854 -95458120 + MLT1L LTR MaLR 4 73 -537 1 646 531 181 101 43 chr15 8037610 8037749 -95457225 + B1_Mur2 SINE Alu 1 147 -2 1 646 294 333 16 31 chr15 8038105 8038232 -95456742 + ID_B1 SINE B4 98 222 -2 1 646 265 330 57 0 chr15 8038750 8038856 -95456118 + ID_B1 SINE B4 80 191 -33 1 646 234 0 0 0 chr15 8039063 8039089 -95455885 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 646 1285 30 121 0 chr15 8039093 8039258 -95455716 - B2_Mm1a SINE B2 -8 185 1 1 646 1452 69 16 0 chr15 8039368 8039557 -95455417 - B2_Mm2 SINE B2 -2 193 2 1 646 1201 41 7 7 chr15 8039757 8039904 -95455070 - B1_Mm SINE Alu 0 147 1 1 646 323 217 172 16 chr15 8040241 8040363 -95454611 + ID_B1 SINE B4 80 220 -4 1 646 21 0 0 0 chr15 8040466 8040487 -95454487 + AT_rich Low_complexity Low_complexity 1 21 0 1 646 290 347 63 16 chr15 8040994 8041120 -95453854 + MER21B LTR ERV1 663 794 -69 1 646 604 217 155 0 chr15 8041809 8041938 -95453036 + B1_Mur1 SINE Alu 1 149 0 1 646 531 224 172 0 chr15 8041987 8042103 -95452871 + B1_Mur2 SINE Alu 10 145 -4 1 646 882 202 38 24 chr15 8042243 8042456 -95452518 - B3 SINE B2 0 216 1 1 646 402 274 17 17 chr15 8042487 8042602 -95452372 + PB1 SINE Alu 2 116 -11 1 646 435 231 72 58 chr15 8042643 8042781 -95452193 + B1F SINE Alu 10 149 0 1 646 287 275 325 0 chr15 8043252 8043412 -95451562 - B3 SINE B2 -4 212 1 1 646 215 295 49 104 chr15 8044067 8044080 -95450894 - B1_Mur3 SINE Alu -1 148 137 1 646 1197 34 14 0 chr15 8044080 8044227 -95450747 - B1_Mur4 SINE Alu 0 150 2 1 646 319 235 74 57 chr15 8044227 8044357 -95450617 - PB1D10 SINE Alu -13 136 13 1 646 494 57 0 0 chr15 8044452 8044522 -95450452 + B1_Mus2 SINE Alu 78 147 0 1 646 783 213 91 6 chr15 8045524 8045699 -95449275 - B3 SINE B2 -24 192 3 1 646 1759 257 191 6 chr15 8045728 8046812 -95448162 + Lx8 LINE L1 6189 7471 -2 1 646 563 61 250 9 chr15 8046860 8046976 -95447998 + B1_Mur3 SINE Alu 6 149 0 1 646 381 274 0 33 chr15 8047208 8047329 -95447645 + ID_B1 SINE B4 108 224 0 1 646 210 262 98 0 chr15 8047352 8047413 -95447561 - PB1D10 SINE Alu -13 104 38 1 646 1167 69 0 0 chr15 8047611 8047755 -95447219 + B1_Mm SINE Alu 2 145 -2 1 646 925 204 40 20 chr15 8047930 8048130 -95446844 + B3 SINE B2 1 204 -12 1 646 619 190 0 0 chr15 8048166 8048282 -95446692 + B1_Mur4 SINE Alu 3 118 -32 1 646 282 29 0 0 chr15 8048285 8048320 -95446654 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 646 197 33 33 0 chr15 8048332 8048362 -95446612 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 646 311 284 23 0 chr15 8048362 8048450 -95446524 + GA-rich Low_complexity Low_complexity 3 92 0 1 646 314 216 56 53 chr15 8049744 8049855 -95445119 - B1_Mm SINE Alu -2 118 6 1 646 281 293 24 0 chr15 8049930 8050012 -95444962 - RSINE1 SINE B4 -66 99 16 1 646 267 271 37 52 chr15 8051163 8051299 -95443675 + Charlie1a DNA MER1_type 45 178 -1277 1 646 230 304 104 38 chr15 8051281 8051387 -95443587 - MER57E1 LTR ERV1 -10 362 250 1 646 3721 95 19 24 chr15 8051433 8051867 -95443107 - MT2B LTR ERVL -22 579 148 1 646 2942 79 11 130 chr15 8051867 8052406 -95442568 - IAPLTR2_Mm LTR ERVK 0 475 1 1 646 3721 95 19 24 chr15 8052406 8052553 -95442421 - MT2B LTR ERVL -454 147 1 1 646 329 219 38 105 chr15 8052553 8052592 -95442382 - ORR1A3-int LTR MaLR -1350 613 584 1 646 494 280 74 22 chr15 8052598 8052733 -95442241 + RSINE1 SINE B4 10 151 -14 1 646 338 170 234 0 chr15 8052742 8052836 -95442138 - B3 SINE B2 -100 116 1 1 646 1851 116 16 138 chr15 8052879 8053181 -95441793 + ORR1A3 LTR MaLR 1 269 -57 1 646 1130 84 0 0 chr15 8053181 8053323 -95441651 + B1_Mus1 SINE Alu 1 142 -6 1 646 1851 116 16 138 chr15 8053323 8053391 -95441583 + ORR1A3 LTR MaLR 270 326 0 1 646 456 263 70 0 chr15 8053398 8053512 -95441462 - ID_B1 SINE B4 0 224 103 1 646 766 262 0 0 chr15 8053547 8053734 -95441240 - B3 SINE B2 0 216 30 1 646 809 226 61 6 chr15 8053733 8053898 -95441076 - B3 SINE B2 -40 176 3 1 646 447 226 184 170 chr15 8053964 8054072 -95440902 - B4A SINE B4 0 292 230 1 646 1195 68 0 0 chr15 8054072 8054219 -95440755 - B1_Mm SINE Alu 0 147 1 1 646 447 226 184 170 chr15 8054219 8054398 -95440576 - B4A SINE B4 -63 229 1 1 646 423 315 119 12 chr15 8054483 8054734 -95440240 + Charlie1a DNA MER1_type 154 431 -1024 1 646 285 29 0 0 chr15 8054789 8054823 -95440151 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 646 342 0 0 0 chr15 8054823 8054860 -95440114 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 646 919 226 18 32 chr15 8055011 8055230 -95439744 + B3 SINE B2 1 216 0 1 646 1081 51 73 0 chr15 8055402 8055539 -95439435 - B1_Mus2 SINE Alu 0 147 1 1 646 680 229 30 50 chr15 8055697 8055899 -95439075 + B3A SINE B2 1 198 0 1 646 320 280 31 112 chr15 8056062 8056223 -95438751 + B1F SINE Alu 2 149 0 1 646 759 111 17 0 chr15 8056228 8056345 -95438629 + B1_Mus1 SINE Alu 1 119 -29 1 646 1617 22 55 0 chr15 8056370 8056553 -95438421 - B2_Mm1t SINE B2 0 193 1 1 646 394 66 16 16 chr15 8056590 8056652 -95438322 + B1_Mm SINE Alu 79 140 -7 1 646 252 86 0 0 chr15 8056656 8056691 -95438283 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1 646 1236 143 157 137 chr15 8056868 8057052 -95437922 - RLTR24 LTR ERV1 0 529 347 1 646 2792 148 13 38 chr15 8057052 8057523 -95437451 - RMER6B LTR ERVK -2 459 1 1 646 1236 143 157 137 chr15 8057523 8057663 -95437311 - RLTR24 LTR ERV1 -183 346 195 1 646 766 179 7 33 chr15 8057663 8057813 -95437161 - B1_Mm SINE Alu 0 147 2 1 646 1236 143 157 137 chr15 8057813 8057844 -95437130 - RLTR24 LTR ERV1 -335 194 166 1 646 1181 179 9 22 chr15 8057830 8058053 -95436921 - RLTR24 LTR ERV1 -308 221 2 1 646 227 194 116 29 chr15 8058044 8058113 -95436861 - PB1D9 SINE Alu -3 117 43 1 646 358 223 188 21 chr15 8058346 8058442 -95436532 - ID_B1 SINE B4 -1 223 112 1 646 216 275 221 16 chr15 8058475 8058597 -95436377 - B1F SINE Alu -1 148 2 1 646 1205 44 0 0 chr15 8058706 8058843 -95436131 - B1_Mus1 SINE Alu -10 138 2 1 646 298 208 25 38 chr15 8059106 8059186 -95435788 + C-rich Low_complexity Low_complexity 2 80 0 1 646 761 218 0 0 chr15 8060338 8060471 -95434503 + B1_Mur4 SINE Alu 1 133 -17 1 646 497 163 22 6 chr15 8060471 8060593 -95434381 + PB1D9 SINE Alu 26 148 0 1 646 410 182 22 22 chr15 8060855 8060945 -95434029 - PB1D9 SINE Alu -13 107 18 1 646 598 243 51 7 chr15 8060995 8061132 -95433842 + B1_Mur2 SINE Alu 1 143 -6 1 646 1144 125 57 6 chr15 8061373 8061550 -95433424 - B2_Mm2 SINE B2 -5 190 5 1 646 435 340 133 0 chr15 8061881 8062069 -95432905 - ID_B1 SINE B4 -4 220 8 1 646 1224 64 0 0 chr15 8062501 8062642 -95432332 - B1_Mus1 SINE Alu -7 141 1 1 646 189 0 0 0 chr15 8062642 8062663 -95432311 + (T)n Simple_repeat Simple_repeat 1 21 0 1 646 305 279 85 19 chr15 8062792 8062898 -95432076 + PB1D7 SINE Alu 1 113 -7 1 646 856 165 7 35 chr15 8062942 8063086 -95431888 + B1_Mur2 SINE Alu 5 144 -5 1 646 180 97 0 0 chr15 8063108 8063139 -95431835 + (GGGA)n Simple_repeat Simple_repeat 3 33 0 1 646 249 303 52 60 chr15 8063144 8063260 -95431714 + PB1D9 SINE Alu 6 120 0 1 646 775 261 23 0 chr15 8063272 8063448 -95431526 + B3 SINE B2 5 184 -32 1 646 568 214 513 21 chr15 8063859 8064050 -95430924 + B4A SINE B4 1 285 -7 1 646 221 0 0 33 chr15 8064190 8064220 -95430754 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 1 646 336 282 13 0 chr15 8064240 8064318 -95430656 - ID4 SINE ID -4 79 1 1 646 267 146 0 40 chr15 8065762 8065812 -95429162 + PB1D9 SINE Alu 1 48 -72 1 646 259 324 46 0 chr15 8065895 8066003 -95428971 - L1M3 LINE L1 -388 5795 5683 1 646 971 54 11 0 chr15 8066051 8066194 -95428780 - B1_Mus2 SINE Alu 0 149 2 1 646 227 298 0 0 chr15 8066091 8066212 -95428762 - ORR1B1-int LTR MaLR -758 751 631 1 646 838 206 46 56 chr15 8066869 8067085 -95427889 - B3 SINE B2 -2 214 1 1 646 692 282 0 0 chr15 8068650 8068792 -95426182 + B1F2 SINE Alu 1 142 -7 1 646 676 75 149 0 chr15 8069311 8069418 -95425556 - Lx2 LINE L1 0 6997 6875 1 646 1470 75 11 5 chr15 8069438 8069625 -95425349 - B2_Mm1t SINE B2 -5 188 1 1 646 403 286 52 39 chr15 8069675 8069828 -95425146 - RSINE1 SINE B4 -6 159 5 1 646 424 297 47 13 chr15 8069887 8070037 -95424937 - ID_B1 SINE B4 0 224 70 1 646 357 278 0 0 chr15 8070780 8070852 -95424122 - ID4 SINE ID -9 74 3 1 646 575 254 67 0 chr15 8071275 8071409 -95423565 - B1_Mur2 SINE Alu -6 143 1 1 646 444 62 0 0 chr15 8071926 8071990 -95422984 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 646 574 239 21 50 chr15 8072250 8072391 -95422583 - B3A SINE B2 -61 137 1 1 646 776 197 29 0 chr15 8072404 8072541 -95422433 - B1_Mur1 SINE Alu -6 143 3 2 646 317 256 116 0 chr15 8072620 8072741 -95422233 - L1MB7 LINE L1 -1 6183 6049 2 646 395 296 52 0 chr15 8072946 8073061 -95421913 - RSINE1 SINE B4 -36 129 9 2 646 316 321 90 11 chr15 8073238 8073427 -95421547 - L1MB7 LINE L1 -544 5640 5437 2 646 342 252 100 41 chr15 8073441 8073611 -95421363 - L1MB7 LINE L1 -746 5400 5221 2 646 245 322 35 0 chr15 8073722 8073809 -95421165 - RSINE1 SINE B4 -44 121 32 2 646 249 301 14 0 chr15 8074352 8074425 -95420549 - ID4 SINE ID -1 82 9 2 646 578 309 8 36 chr15 8074535 8074741 -95420233 + B3A SINE B2 10 209 -7 2 646 506 299 107 13 chr15 8074808 8074967 -95420007 - B3 SINE B2 -11 205 32 2 646 219 57 86 0 chr15 8075030 8075065 -95419909 - B3A SINE B2 -160 38 1 2 646 237 33 0 0 chr15 8075081 8075111 -95419863 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2 646 6070 69 7 11 chr15 8075150 8075898 -95419076 - L1Md_F2 LINE L1 0 6582 5838 2 646 1231 69 0 0 chr15 8075941 8076085 -95418889 - B1_Mus2 SINE Alu 0 147 4 2 646 1701 31 0 20 chr15 8076100 8076297 -95418677 - B2_Mm1a SINE B2 0 193 1 2 646 366 232 82 39 chr15 8076364 8076482 -95418492 - B1_Mur3 SINE Alu -5 115 4 2 646 690 181 8 38 chr15 8076533 8076665 -95418309 - B1_Mur3 SINE Alu -20 129 2 2 646 372 295 28 9 chr15 8076950 8077056 -95417918 - B1F SINE Alu -41 108 1 2 646 183 340 84 11 chr15 8077068 8077163 -95417811 + MIRc SINE MIR 95 196 -72 2 646 361 273 55 98 chr15 8077461 8077547 -95417427 + B3 SINE B2 41 117 -99 2 646 969 109 0 93 chr15 8077547 8077709 -95417265 - B1_Mm SINE Alu 0 147 1 2 646 1976 90 183 0 chr15 8077718 8078018 -95416956 - IAPEY2_LTR LTR ERVK -2 355 1 2 646 361 273 55 98 chr15 8078018 8078104 -95416870 + B3 SINE B2 126 215 -1 2 646 894 153 7 14 chr15 8078112 8078258 -95416716 + B1_Mus1 SINE Alu 3 147 -1 2 646 1222 70 0 0 chr15 8080451 8080594 -95414380 - B1_Mus2 SINE Alu -4 143 1 2 646 838 145 7 7 chr15 8080990 8081136 -95413838 - B1_Mus1 SINE Alu -1 147 2 2 646 595 258 37 27 chr15 8081136 8081177 -95413797 - ID_B1 SINE B4 -1 223 35 2 646 184 205 0 71 chr15 8081377 8081419 -95413555 - L2b LINE L2 -4 3371 3333 2 646 674 269 72 0 chr15 8081871 8082064 -95412910 - B3 SINE B2 -7 209 3 2 646 1497 61 16 6 chr15 8082182 8082364 -95412610 - B2_Mm2 SINE B2 -10 185 2 2 646 552 156 0 0 chr15 8082373 8082450 -95412524 - tRNA-Asn-AAC tRNA tRNA 0 77 1 2 646 829 218 103 5 chr15 8082987 8083181 -95411793 + B3 SINE B2 4 216 0 2 646 195 129 0 0 chr15 8083312 8083343 -95411631 + (T)n Simple_repeat Simple_repeat 1 31 0 2 646 1258 54 0 0 chr15 8083343 8083490 -95411484 - B1_Mm SINE Alu 0 147 1 2 646 1693 153 142 21 chr15 8083500 8083874 -95411100 + RMER4A LTR ERVK 48 466 0 2 646 461 221 21 10 chr15 8084273 8084369 -95410605 - B1F2 SINE Alu 0 149 53 2 646 264 243 9 97 chr15 8084369 8084386 -95410588 - ID_B1 SINE B4 0 223 121 2 646 777 259 209 45 chr15 8085063 8085691 -95409283 - Lx8 LINE L1 0 7473 6743 2 646 1321 187 84 24 chr15 8086037 8086371 -95408603 - Lx4B LINE L1 -2 7056 6703 2 646 320 299 91 27 chr15 8086372 8086482 -95408492 - RSINE1 SINE B4 -47 118 2 2 646 253 330 34 11 chr15 8087201 8087290 -95407684 - PB1D10 SINE Alu 0 117 27 2 646 402 39 0 0 chr15 8087292 8087344 -95407630 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 646 189 0 0 0 chr15 8087983 8088004 -95406970 + (CTTA)n Simple_repeat Simple_repeat 2 22 0 2 646 363 253 13 0 chr15 8088040 8088115 -95406859 - ID4_ SINE ID -4 79 4 2 646 761 215 196 11 chr15 8088176 8088355 -95406619 - B3 SINE B2 -4 212 1 2 646 595 217 100 8 chr15 8088360 8088490 -95406484 - B1_Mur2 SINE Alu -5 144 3 2 646 371 338 18 30 chr15 8088817 8088982 -95405992 - RSINE1 SINE B4 0 165 3 2 646 1227 81 0 0 chr15 8089459 8089607 -95405367 - B1_Mus1 SINE Alu 0 148 1 2 646 577 288 91 8 chr15 8090482 8090834 -95404140 - L1MB3 LINE L1 -58 6122 5750 2 646 388 222 0 47 chr15 8091454 8091539 -95403435 + B1_Mur2 SINE Alu 48 128 -21 2 646 801 249 32 5 chr15 8091549 8091735 -95403239 - B3 SINE B2 -25 191 1 2 646 570 205 8 33 chr15 8092288 8092409 -95402565 - B1_Mur2 SINE Alu 0 149 32 2 646 203 55 0 53 chr15 8092465 8092503 -95402471 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 2 646 728 204 36 0 chr15 8092755 8092892 -95402082 + B1_Mur1 SINE Alu 7 148 -1 2 646 788 236 43 16 chr15 8093416 8093601 -95401373 + B3 SINE B2 14 203 -13 2 646 268 265 19 84 chr15 8094427 8094534 -95400440 - ID_B1 SINE B4 -37 187 88 2 646 920 55 6 156 chr15 8094606 8094681 -95400293 - B1_Mus1 SINE Alu 0 148 78 2 646 1272 61 0 0 chr15 8094681 8094828 -95400146 + B1_Mus1 SINE Alu 2 148 0 2 646 920 55 6 156 chr15 8094828 8094925 -95400049 - B1_Mus1 SINE Alu -71 77 2 2 646 1661 48 0 0 chr15 8094981 8095169 -95399805 + B2_Mm1a SINE B2 2 189 -4 2 646 501 330 82 50 chr15 8095855 8096136 -95398838 - B4A SINE B4 0 292 3 2 646 201 74 0 0 chr15 8096157 8096184 -95398790 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2 646 413 279 8 0 chr15 8096188 8096303 -95398671 - B1_Mm SINE Alu -27 122 4 2 646 180 97 0 0 chr15 8096452 8096483 -95398491 + (T)n Simple_repeat Simple_repeat 1 31 0 2 646 1302 77 64 27 chr15 8096540 8096727 -95398247 + B2_Mm2 SINE B2 2 195 0 2 646 278 183 136 68 chr15 8096915 8097003 -95397971 - B3A SINE B2 -99 99 6 2 646 526 138 16 37 chr15 8097837 8097946 -95397028 - B1_Mur4 SINE Alu -24 126 13 2 646 1089 123 44 11 chr15 8098641 8098822 -95396152 + B2_Mm2 SINE B2 1 187 -8 2 646 362 291 106 20 chr15 8099054 8099205 -95395769 - RSINE1 SINE B4 0 165 2 2 646 189 0 0 0 chr15 8099428 8099449 -95395525 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2 646 957 105 184 0 chr15 8099450 8099602 -95395372 - B2_Mm2 SINE B2 -15 180 1 2 646 266 273 128 29 chr15 8100307 8100409 -95394565 + PB1D9 SINE Alu 2 113 -7 2 646 26 0 0 0 chr15 8100410 8100436 -95394538 + AT_rich Low_complexity Low_complexity 1 26 0 2 646 1536 27 16 11 chr15 8100521 8100706 -95394268 + L1Md_F2 LINE L1 6397 6582 0 2 646 337 50 100 0 chr15 8101840 8101900 -95393074 + (GGGAGA)n Simple_repeat Simple_repeat 3 68 0 2 646 337 273 121 0 chr15 8102102 8102201 -95392773 - PB1D10 SINE Alu -1 116 6 2 646 423 0 0 0 chr15 8102315 8102362 -95392612 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2 646 1171 44 0 42 chr15 8102362 8102505 -95392469 - B1_Mus2 SINE Alu -9 138 2 2 646 330 188 165 0 chr15 8102541 8102626 -95392348 - B1_Mur3 SINE Alu -7 142 44 2 646 401 262 75 28 chr15 8104153 8104259 -95390715 - PB1D10 SINE Alu -3 114 4 2 646 180 0 0 0 chr15 8104338 8104358 -95390616 + (CAGAGA)n Simple_repeat Simple_repeat 2 21 0 2 646 466 333 49 25 chr15 8104407 8104570 -95390404 - B4 SINE B4 -124 168 2 2 646 614 307 73 11 chr15 8104687 8104878 -95390096 + B3 SINE B2 14 216 0 2 646 412 298 136 41 chr15 8105441 8105508 -95389466 + B4 SINE B4 2 82 -210 2 646 245 337 67 67 chr15 8105508 8105613 -95389361 + PB1D10 SINE Alu 1 105 -12 2 646 513 84 0 0 chr15 8105613 8105684 -95389290 + (TG)n Simple_repeat Simple_repeat 1 71 0 2 646 474 193 17 84 chr15 8105728 8105847 -95389127 - PB1D10 SINE Alu -1 116 6 2 646 23 77 0 42 chr15 8106028 8106123 -95388851 + AT_rich Low_complexity Low_complexity 1 91 0 2 646 750 143 83 76 chr15 8106130 8106274 -95388700 - B1_Mur2 SINE Alu 0 149 5 2 646 725 204 88 0 chr15 8106360 8106497 -95388477 - B1_Mur1 SINE Alu 0 149 1 2 646 283 75 75 0 chr15 8106607 8106660 -95388314 + (CATA)n Simple_repeat Simple_repeat 2 58 0 2 646 711 274 0 73 chr15 8107347 8107579 -95387395 + B3 SINE B2 1 215 -1 2 646 521 165 26 97 chr15 8108177 8108291 -95386683 + PB1D9 SINE Alu 2 107 -13 2 646 234 0 0 0 chr15 8108292 8108318 -95386656 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 2 646 200 188 0 0 chr15 8108415 8108447 -95386527 + polypyrimidine Low_complexity Low_complexity 1 32 0 2 646 228 189 18 54 chr15 8108471 8108527 -95386447 + (TATG)n Simple_repeat Simple_repeat 3 56 0 2 646 358 264 98 16 chr15 8108586 8108709 -95386265 + B1_Mm SINE Alu 3 135 -12 2 646 273 364 59 7 chr15 8108725 8108877 -95386097 + MER5A DNA MER1_type 10 169 -20 2 646 354 169 0 0 chr15 8109340 8109405 -95385569 + T-rich Low_complexity Low_complexity 3 67 0 2 646 531 235 3 9 chr15 8109405 8109522 -95385452 - B1F1 SINE Alu 0 120 2 2 646 870 54 0 0 chr15 8110162 8110274 -95384700 + B1_Mus1 SINE Alu 21 132 -16 2 646 1355 27 0 0 chr15 8111521 8111668 -95383306 - B1_Mm SINE Alu 0 147 1 2 646 1857 59 129 0 chr15 8111891 8112163 -95382811 - BGLII LTR ERVK -114 307 1 2 646 795 104 0 46 chr15 8112737 8112868 -95382106 - L1_Mur2 LINE L1 -2496 3390 3266 2 646 6976 122 27 123 chr15 8112867 8113598 -95381376 + L1_Mur2 LINE L1 3360 4110 -1767 2 646 198 0 0 0 chr15 8113598 8113620 -95381354 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2 646 1342 25 6 0 chr15 8113620 8113780 -95381194 - B2_Mm1a SINE B2 -31 162 2 3 646 6976 122 27 123 chr15 8113780 8114346 -95380628 + L1_Mur2 LINE L1 4111 4677 -1200 2 646 3965 93 6 0 chr15 8114340 8114875 -95380099 - Lx LINE L1 -529 6125 5588 3 646 1452 121 17 2 chr15 8114892 8115134 -95379840 - L1_Mm LINE L1 -1011 4872 4596 3 646 1221 75 0 0 chr15 8115140 8115287 -95379687 - B1_Mus2 SINE Alu 0 147 1 3 646 1061 61 20 0 chr15 8115288 8115436 -95379538 - B2_Mm1t SINE B2 0 193 43 3 646 436 14 55 41 chr15 8115445 8115518 -95379456 - Lx LINE L1 -4 6650 6577 3 646 4699 140 40 6 chr15 8115518 8116446 -95378528 + Lx2 LINE L1 5409 6369 -628 3 646 6556 169 109 68 chr15 8116446 8116978 -95377996 - MYSERV16_I-int LTR ERVK -461 1865 1316 3 646 1274 48 0 7 chr15 8116978 8117125 -95377849 - B1_Mus2 SINE Alu 0 147 2 3 646 6556 169 109 68 chr15 8117125 8117461 -95377513 - MYSERV16_I-int LTR ERVK -1011 1315 943 3 646 184 229 127 32 chr15 8117461 8117524 -95377450 - L3 LINE CR1 -3516 973 905 3 646 6556 169 109 68 chr15 8117524 8118176 -95376798 - MYSERV16_I-int LTR ERVK -1011 942 217 3 646 1045 126 15 73 chr15 8118176 8118189 -95376785 - B2_Mm2 SINE B2 -1 194 182 3 646 1317 14 14 0 chr15 8118189 8118334 -95376640 - B1_Mus1 SINE Alu 0 148 2 3 646 1045 126 15 73 chr15 8118334 8118361 -95376613 - B2_Mm2 SINE B2 -14 181 167 3 646 186 43 0 0 chr15 8118361 8118384 -95376590 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 646 1095 99 25 6 chr15 8118384 8118547 -95376427 - B2_Mm1t SINE B2 -26 167 2 3 646 862 201 43 21 chr15 8118558 8118746 -95376228 - B3 SINE B2 -4 212 21 3 646 384 178 54 14 chr15 8120390 8120464 -95374510 + MTD LTR MaLR 4 80 -339 3 646 296 267 47 56 chr15 8120503 8120610 -95374364 - PB1 SINE Alu -2 125 20 3 646 432 299 87 44 chr15 8120631 8120837 -95374137 - MLT1G LTR MaLR -304 287 73 3 646 1015 130 219 6 chr15 8121039 8121217 -95373757 + B3 SINE B2 1 216 0 3 646 23 33 0 0 chr15 8121217 8121247 -95373727 + AT_rich Low_complexity Low_complexity 1 30 0 3 646 655 309 47 53 chr15 8121289 8121627 -95373347 + ORR1E LTR MaLR 1 336 -23 3 646 1028 145 43 43 chr15 8122315 8122502 -95372472 - B2_Mm2 SINE B2 -8 187 1 3 646 872 27 18 0 chr15 8122993 8123104 -95371870 - B1_Mus2 SINE Alu 0 147 35 3 646 505 234 224 17 chr15 8123129 8123303 -95371671 - B3 SINE B2 -5 211 2 3 646 245 269 122 28 chr15 8123350 8123457 -95371517 + L1M1 LINE L1 5795 5911 -392 3 646 244 268 0 27 chr15 8123535 8123608 -95371366 + G-rich Low_complexity Low_complexity 4 74 0 3 646 263 182 91 0 chr15 8123865 8123920 -95371054 - MER5A DNA MER1_type -49 140 81 3 646 882 189 152 58 chr15 8123985 8124176 -95370798 - B3 SINE B2 -6 210 2 3 646 225 0 0 0 chr15 8125137 8125162 -95369812 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 646 259 235 0 0 chr15 8125311 8125362 -95369612 + PB1 SINE Alu 13 63 -64 3 646 253 257 107 74 chr15 8125362 8125424 -95369550 + ID_B1 SINE B4 100 210 -14 3 646 288 214 18 0 chr15 8125454 8125510 -95369464 + ID4 SINE ID 17 73 -10 3 646 1014 120 28 7 chr15 8125521 8125664 -95369310 + B1_Mus2 SINE Alu 2 147 0 3 646 216 0 0 0 chr15 8125701 8125725 -95369249 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 3 646 1192 77 0 6 chr15 8125727 8125884 -95369090 - B2_Mm2 SINE B2 -38 157 2 3 646 415 176 111 0 chr15 8125961 8126056 -95368918 + PB1D7 SINE Alu 17 120 0 3 647 224 294 0 0 chr15 8126884 8126935 -95368039 + B1F2 SINE Alu 5 55 -94 3 647 1295 116 44 6 chr15 8127154 8127336 -95367638 + B2_Mm2 SINE B2 2 190 -5 3 647 371 282 68 0 chr15 8127418 8127521 -95367453 + PB1D10 SINE Alu 1 110 -7 3 647 991 143 7 20 chr15 8127525 8127675 -95367299 + B1_Mus1 SINE Alu 1 148 0 3 647 22 56 0 0 chr15 8127736 8127772 -95367202 + AT_rich Low_complexity Low_complexity 1 36 0 3 647 297 286 83 0 chr15 8127807 8127940 -95367034 - L1MA5 LINE L1 -3 6297 6154 3 647 511 263 30 8 chr15 8128776 8128910 -95366064 - B1F2 SINE Alu 0 149 13 3 647 281 321 28 42 chr15 8128783 8128926 -95366048 - ID_B1 SINE B4 -7 217 77 3 647 26 0 0 0 chr15 8128934 8128960 -95366014 + AT_rich Low_complexity Low_complexity 1 26 0 3 647 333 328 144 14 chr15 8129552 8129691 -95365283 + ID_B1 SINE B4 66 222 -2 3 647 567 258 16 8 chr15 8129572 8129693 -95365281 + PB1 SINE Alu 6 127 0 3 647 339 224 135 58 chr15 8130044 8130148 -95364826 + MT2B LTR ERVL 153 264 -337 3 647 726 120 0 9 chr15 8130071 8130180 -95364794 + B1_Mus1 SINE Alu 38 145 -3 3 647 1329 73 0 0 chr15 8130180 8130358 -95364616 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 3 647 183 195 0 0 chr15 8130362 8130393 -95364581 + polypurine Low_complexity Low_complexity 1 31 0 3 647 375 23 0 0 chr15 8130393 8130437 -95364537 + (GGAAA)n Simple_repeat Simple_repeat 1 44 0 3 647 180 0 0 0 chr15 8130446 8130466 -95364508 + (CAAG)n Simple_repeat Simple_repeat 2 21 0 3 647 534 179 19 9 chr15 8130472 8130579 -95364395 + PB1D10 SINE Alu 10 117 0 3 647 237 268 223 54 chr15 8130579 8130602 -95364372 + B4A SINE B4 95 246 -46 3 647 828 190 28 0 chr15 8131397 8131539 -95363435 + B1_Mur2 SINE Alu 2 147 -2 3 647 199 333 110 9 chr15 8132718 8132827 -95362147 + MIRb SINE MIR 35 154 -114 3 647 485 267 65 20 chr15 8133000 8133153 -95361821 - B3 SINE B2 -56 160 1 3 647 745 237 13 13 chr15 8133340 8133498 -95361476 - B3 SINE B2 -2 214 57 3 647 249 104 62 0 chr15 8133527 8133575 -95361399 - B2_Mm2 SINE B2 -8 187 137 3 647 376 95 11 0 chr15 8133565 8133624 -95361350 - B2_Mm2 SINE B2 -102 114 52 3 647 1421 63 23 0 chr15 8133656 8133831 -95361143 - B2_Mm1t SINE B2 -14 179 1 3 647 387 105 0 0 chr15 8133873 8133930 -95361044 + (T)n Simple_repeat Simple_repeat 1 57 0 3 647 1308 41 0 0 chr15 8133932 8134077 -95360897 - B1_Mus1 SINE Alu -3 145 1 3 647 655 181 29 163 chr15 8134624 8134723 -95360251 + B1_Mur4 SINE Alu 2 89 -61 3 647 1590 68 5 0 chr15 8134723 8134915 -95360059 + B2_Mm1t SINE B2 1 193 0 3 647 655 181 29 163 chr15 8134915 8134987 -95359987 + B1_Mur4 SINE Alu 90 150 0 3 647 216 0 0 0 chr15 8134990 8135014 -95359960 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 3 647 1124 78 5 96 chr15 8135130 8135329 -95359645 - B2_Mm2 SINE B2 0 195 15 3 647 21 36 0 0 chr15 8135543 8135571 -95359403 + AT_rich Low_complexity Low_complexity 1 28 0 3 647 269 297 69 0 chr15 8137628 8137729 -95357245 - L1MB7 LINE L1 -59 6125 6018 3 647 910 263 0 0 chr15 8137828 8138022 -95356952 - B3A SINE B2 -4 194 1 3 647 1044 89 7 40 chr15 8139073 8139225 -95355749 + B1_Mus1 SINE Alu 2 148 0 3 647 633 213 0 0 chr15 8139944 8140066 -95354908 - B1_Mur1 SINE Alu 0 149 28 3 647 1469 71 5 11 chr15 8140075 8140261 -95354713 - B2_Mm1t SINE B2 -7 186 2 3 647 514 271 39 26 chr15 8140290 8140445 -95354529 - RSINE1 SINE B4 -4 161 5 3 647 350 347 98 21 chr15 8140470 8140664 -95354310 + Tigger5 DNA MER2_type 1 209 -2197 3 647 746 244 65 61 chr15 8140730 8140944 -95354030 - B3 SINE B2 0 216 2 3 647 2895 176 161 11 chr15 8141297 8141748 -95353226 - RMER1B Other Other -2 1064 514 3 647 4431 124 64 29 chr15 8141748 8142478 -95352496 + RMER6A LTR ERVK 1 756 0 3 647 2895 212 185 12 chr15 8142478 8142879 -95352095 - RMER1B Other Other -491 575 15 3 647 998 178 22 78 chr15 8142904 8143136 -95351838 + URR1B DNA MER1_type 1 219 -6 3 647 271 371 127 33 chr15 8143281 8143462 -95351512 - MLT1J LTR MaLR -101 411 214 3 647 348 24 0 0 chr15 8143701 8143742 -95351232 + (TTG)n Simple_repeat Simple_repeat 2 42 0 3 647 653 202 69 8 chr15 8143745 8143875 -95351099 - B1_Mur1 SINE Alu -8 141 4 3 647 472 140 277 10 chr15 8143908 8144009 -95350965 - RMER1C Other Other -11 1331 1204 3 647 447 68 0 0 chr15 8144009 8144068 -95350906 + (GGA)n Simple_repeat Simple_repeat 1 59 0 3 647 427 252 0 19 chr15 8144070 8144175 -95350799 - RMER1C Other Other -126 1216 1114 3 647 248 309 11 0 chr15 8144177 8144271 -95350703 - L1ME3A LINE L1 -8 6165 6071 3 647 439 275 28 48 chr15 8144517 8144662 -95350312 - B1F1 SINE Alu -1 148 7 3 647 1169 206 96 16 chr15 8144878 8145243 -95349731 - L1_Rod LINE L1 -621 5226 4833 3 647 670 173 97 2 chr15 8145245 8145372 -95349602 + B1_Mur1 SINE Alu 13 148 -1 3 647 993 217 256 10 chr15 8145412 8145724 -95349250 - MTD LTR MaLR -30 389 1 3 647 1318 235 109 52 chr15 8145724 8146253 -95348721 - L1_Rod LINE L1 -993 4854 4293 3 647 1671 42 0 11 chr15 8146253 8146444 -95348530 - B2_Mm1t SINE B2 -3 190 2 3 647 1318 235 109 52 chr15 8146444 8146474 -95348500 - L1_Rod LINE L1 -1555 4292 4263 3 647 268 68 0 0 chr15 8146497 8146541 -95348433 + RMER4B LTR ERVK 2 45 -540 3 647 7358 104 17 13 chr15 8146541 8147821 -95347153 - Lx LINE L1 -6 6648 5360 3 647 1458 64 32 0 chr15 8147821 8147848 -95347126 - B2_Mm1a SINE B2 0 193 162 3 647 243 0 0 0 chr15 8147848 8147875 -95347099 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 3 647 1458 64 32 0 chr15 8147875 8148034 -95346940 - B2_Mm1a SINE B2 -32 161 2 3 647 4793 108 17 46 chr15 8148034 8148285 -95346689 - Lx LINE L1 -524 5359 5131 3 647 2368 139 144 10 chr15 8148285 8148771 -95346203 + RMER4B LTR ERVK 35 585 0 3 647 446 241 129 25 chr15 8148772 8148947 -95346027 - L1_Rod LINE L1 -1858 4285 4102 3 647 340 82 0 32 chr15 8149593 8149656 -95345318 + (CCCA)n Simple_repeat Simple_repeat 4 64 0 3 647 550 283 53 32 chr15 8149718 8149873 -95345101 - ID_B1 SINE B4 -50 242 82 3 647 1023 274 17 74 chr15 8149916 8150215 -95344759 - B4 SINE B4 -7 285 4 3 647 654 262 79 37 chr15 8150432 8150611 -95344363 - B3A SINE B2 0 198 12 3 647 1372 138 37 0 chr15 8150611 8150829 -95344145 + URR1A DNA MER1_type 1 226 0 4 647 366 23 0 0 chr15 8151388 8151431 -95343543 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 647 533 264 44 153 chr15 8151454 8151527 -95343447 - RSINE1 SINE B4 0 165 117 4 647 1433 79 26 0 chr15 8151527 8151716 -95343258 + B2_Mm2 SINE B2 2 195 0 4 647 533 264 44 153 chr15 8151716 8151825 -95343149 - RSINE1 SINE B4 -49 116 3 4 647 1189 75 7 0 chr15 8152463 8152609 -95342365 + B1_Mm SINE Alu 1 147 0 4 647 180 0 0 0 chr15 8152609 8152629 -95342345 + (TAAAAA)n Simple_repeat Simple_repeat 5 24 0 4 647 1238 68 0 0 chr15 8152663 8152811 -95342163 + B1_Mus1 SINE Alu 1 148 0 4 647 367 268 0 0 chr15 8153011 8153082 -95341892 + ID4 SINE ID 11 81 -2 4 647 273 247 174 10 chr15 8153135 8153233 -95341741 - PB1D10 SINE Alu -3 114 1 4 647 282 294 15 0 chr15 8153896 8153964 -95341010 - LTR80B LTR ERVL -310 274 206 4 647 9426 116 12 46 chr15 8154146 8156123 -95338851 + L1Md_F LINE L1 522 2464 -3419 4 647 1334 14 7 0 chr15 8156123 8156269 -95338705 + B1_Mm SINE Alu 1 147 0 4 647 9426 94 3 22 chr15 8156269 8156431 -95338543 + L1Md_F LINE L1 2465 2606 -3277 4 647 5019 62 22 9 chr15 8156439 8157071 -95337903 + L1_Mus2 LINE L1 5927 6566 0 4 647 333 208 144 77 chr15 8157304 8157408 -95337566 - PB1D10 SINE Alu -5 112 2 4 647 346 251 297 61 chr15 8157481 8157710 -95337264 - B4A SINE B4 -9 283 1 4 647 474 284 42 14 chr15 8157718 8157861 -95337113 - B1_Mur1 SINE Alu 0 149 3 4 647 1341 96 16 36 chr15 8157872 8158066 -95336908 - B2_Mm2 SINE B2 -5 190 1 4 647 622 236 216 9 chr15 8158377 8158604 -95336370 - MLT1E2 LTR MaLR -2 625 352 4 647 382 53 0 35 chr15 8158647 8158705 -95336269 + B1_Mus2 SINE Alu 4 59 -88 4 647 180 158 0 0 chr15 8158746 8158784 -95336190 + (CAGG)n Simple_repeat Simple_repeat 2 39 0 4 647 764 58 0 0 chr15 8158822 8158925 -95336049 + B1_Mus2 SINE Alu 45 147 0 4 647 252 158 0 0 chr15 8158938 8158995 -95335979 + A-rich Low_complexity Low_complexity 1 57 0 4 647 289 20 140 0 chr15 8159544 8159594 -95335380 - L1Md_F3 LINE L1 -2 6582 6526 4 647 376 290 33 35 chr15 8160724 8160869 -95334105 - PB1D7 SINE Alu 0 149 2 4 647 186 209 0 0 chr15 8161007 8161050 -95333924 + GA-rich Low_complexity Low_complexity 2 44 0 4 647 233 98 24 0 chr15 8161050 8161091 -95333883 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 647 563 206 17 151 chr15 8161182 8161354 -95333620 + RSINE1 SINE B4 3 151 -14 4 647 366 91 0 0 chr15 8161364 8161419 -95333555 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 647 22 80 0 0 chr15 8161425 8161475 -95333499 + AT_rich Low_complexity Low_complexity 1 50 0 4 647 657 169 0 4 chr15 8161501 8161613 -95333361 + B1_Mur1 SINE Alu 39 147 -2 4 647 21 36 0 0 chr15 8161750 8161778 -95333196 + AT_rich Low_complexity Low_complexity 1 28 0 4 647 649 317 66 44 chr15 8161996 8162270 -95332704 - B4A SINE B4 -8 284 5 4 647 296 255 112 20 chr15 8163257 8163409 -95331565 + L1MB1 LINE L1 5992 6157 -32 4 647 848 204 84 0 chr15 8163923 8164090 -95330884 - B3A SINE B2 -17 181 1 4 647 225 351 0 13 chr15 8164411 8164489 -95330485 + PB1 SINE Alu 51 127 0 4 647 204 97 0 0 chr15 8164652 8164683 -95330291 + (TTCC)n Simple_repeat Simple_repeat 4 34 0 4 647 1126 215 128 36 chr15 8164687 8164991 -95329983 - IAPEY3_LTR LTR ERVK 0 332 1 4 647 279 0 0 0 chr15 8165765 8165796 -95329178 + (CAACC)n Simple_repeat Simple_repeat 3 33 0 4 647 390 184 0 0 chr15 8165883 8165959 -95329015 + GA-rich Low_complexity Low_complexity 2 77 0 4 647 432 250 62 28 chr15 8166110 8166254 -95328720 - B1F2 SINE Alu 0 149 1 4 647 611 222 17 25 chr15 8166909 8167029 -95327945 - PB1D9 SINE Alu -1 119 1 4 647 898 145 139 0 chr15 8167585 8167751 -95327223 - B2_Mm2 SINE B2 -5 190 2 4 647 1244 21 0 0 chr15 8167841 8167981 -95326993 + B1_Mm SINE Alu 1 140 -7 4 647 273 119 0 0 chr15 8167994 8168036 -95326938 + (CATA)n Simple_repeat Simple_repeat 2 43 0 4 647 713 300 11 11 chr15 8168044 8168226 -95326748 - B3 SINE B2 -34 182 1 4 647 930 19 0 36 chr15 8170003 8170114 -95324860 + U6 snRNA snRNA 1 107 0 4 647 1110 28 14 0 chr15 8170114 8170259 -95324715 + L1Md_F2 LINE L1 6435 6581 -1 4 647 1057 204 19 14 chr15 8170387 8170601 -95324373 - B3 SINE B2 0 216 2 4 647 198 0 0 0 chr15 8170652 8170674 -95324300 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 647 273 57 0 0 chr15 8172246 8172281 -95322693 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 647 463 187 278 0 chr15 8173174 8173347 -95321627 - ORR1D1 LTR MaLR 0 384 164 4 647 432 55 0 0 chr15 8173363 8173418 -95321556 + (GGGA)n Simple_repeat Simple_repeat 3 57 0 4 647 625 173 78 67 chr15 8173446 8173626 -95321348 - ORR1D1 LTR MaLR -192 182 1 4 647 455 281 171 12 chr15 8174021 8174273 -95320701 + B4 SINE B4 1 292 0 4 647 732 242 152 0 chr15 8174313 8174544 -95320430 + MTD LTR MaLR 27 292 -127 4 647 487 170 128 28 chr15 8174666 8174775 -95320199 - PB1D9 SINE Alu 0 120 1 4 647 304 276 0 26 chr15 8175763 8175841 -95319133 - ID4_ SINE ID -3 80 5 4 647 622 248 7 0 chr15 8176337 8176474 -95318500 + B1_Mur1 SINE Alu 6 143 -6 4 647 1238 28 0 0 chr15 8176560 8176704 -95318270 - B1_Mus2 SINE Alu -2 145 2 4 647 21 36 0 0 chr15 8176766 8176794 -95318180 + AT_rich Low_complexity Low_complexity 1 28 0 4 647 581 290 79 15 chr15 8177591 8177794 -95317180 + B4 SINE B4 2 217 -75 4 647 265 304 39 0 chr15 8177899 8178001 -95316973 - MTE2a LTR MaLR -9 370 265 4 647 481 291 162 52 chr15 8178128 8178418 -95316556 - MTE2a LTR MaLR -57 322 1 4 647 21 36 0 0 chr15 8179772 8179800 -95315174 + AT_rich Low_complexity Low_complexity 1 28 0 4 647 621 217 21 14 chr15 8182173 8182313 -95312661 + B1_Mur3 SINE Alu 2 142 -7 4 647 24 67 0 0 chr15 8182313 8182358 -95312616 + AT_rich Low_complexity Low_complexity 1 45 0 4 647 284 71 24 0 chr15 8182365 8182407 -95312567 - ORR1C2 LTR MaLR -12 366 324 4 647 743 167 7 42 chr15 8182416 8182560 -95312414 - B1_Mus2 SINE Alu 0 147 9 4 647 1324 169 111 88 chr15 8182557 8182900 -95312074 - ORR1C2 LTR MaLR -33 351 1 4 647 843 230 11 22 chr15 8183905 8184087 -95310887 + B3A SINE B2 3 182 -16 4 647 2506 81 116 42 chr15 8184102 8184552 -95310422 - LTRIS2 LTR ERV1 -81 483 1 4 647 767 200 155 0 chr15 8184553 8184753 -95310221 - MuRRS4-int LTR ERV1 -42 5021 4791 4 647 1717 21 0 0 chr15 8184875 8185067 -95309907 - B2_Mm1t SINE B2 0 193 2 4 647 12355 102 26 5 chr15 8185087 8186807 -95308167 - MuRRS4-int LTR ERV1 -917 4146 2391 4 647 2417 112 14 33 chr15 8186785 8187337 -95307637 - MuRRS4-int LTR ERV1 -2800 2263 1633 4 647 1629 203 128 14 chr15 8187359 8187983 -95306991 - MuRRS4-int LTR ERV1 -3619 1444 750 4 647 5097 117 18 16 chr15 8187967 8188733 -95306241 - RMER16-int LTR ERVK -3958 1448 681 4 647 757 119 213 6 chr15 8188703 8188872 -95306102 - RMER16-int LTR ERVK -5062 344 141 4 647 251 155 50 33 chr15 8189423 8189483 -95305491 - MuRRS4-int LTR ERV1 -3637 61 1 4 647 1112 96 12 6 chr15 8189483 8189651 -95305323 - LTRIS3 LTR ERV1 0 512 344 4 647 1090 89 0 14 chr15 8189735 8189883 -95305091 - B1_Mus1 SINE Alu -2 146 1 4 647 275 0 29 0 chr15 8189886 8189921 -95305053 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 4 647 1447 118 17 9 chr15 8190414 8190644 -95304330 - Lx3B LINE L1 -6 6967 6736 4 647 524 231 43 0 chr15 8191793 8191910 -95303064 - B1_Mur2 SINE Alu -16 133 12 4 647 499 245 28 14 chr15 8191957 8192098 -95302876 + B1_Mur1 SINE Alu 7 149 0 4 647 411 0 19 0 chr15 8192975 8193027 -95301947 + RLTR1B-int LTR ERV1 3247 3299 0 4 647 1267 48 87 6 chr15 8193027 8193367 -95301607 + RLTR1B LTR ERV1 1 410 -102 4 647 471 142 14 0 chr15 8193371 8193461 -95301513 + RLTR1 LTR ERV1 470 550 -74 4 647 920 168 0 0 chr15 8193520 8193669 -95301305 - B1_Mur4 SINE Alu 0 150 2 4 647 523 196 92 6 chr15 8195302 8195466 -95299508 - Lx9 LINE L1 -1 7643 7466 4 647 1404 148 9 5 chr15 8197433 8197657 -95297317 + URR1B DNA MER1_type 1 225 0 4 647 332 273 15 76 chr15 8198042 8198173 -95296801 + RSINE1 SINE B4 21 143 -22 4 647 1057 71 43 0 chr15 8198359 8198500 -95296474 - B1_Mus1 SINE Alu -1 147 1 4 647 1269 34 0 0 chr15 8198711 8198857 -95296117 - B1_Mm SINE Alu 0 147 2 4 647 536 314 99 27 chr15 8198874 8199400 -95295574 - L1MA6 LINE L1 -1 6299 5718 4 647 914 227 83 36 chr15 8199511 8199813 -95295161 - L1MA6 LINE L1 -566 5734 5419 4 647 1174 82 0 0 chr15 8199831 8199978 -95294996 + B1_Mus1 SINE Alu 1 147 -1 4 647 180 97 0 0 chr15 8200072 8200103 -95294871 + (GTTTG)n Simple_repeat Simple_repeat 2 32 0 4 647 531 176 30 53 chr15 8200113 8200245 -95294729 - B1_Mus2 SINE Alu -4 143 15 4 647 216 275 133 97 chr15 8200115 8200280 -95294694 - B4 SINE B4 -72 220 50 4 647 306 145 32 16 chr15 8201167 8201230 -95293744 - B3 SINE B2 0 216 153 4 647 243 61 0 0 chr15 8201512 8201545 -95293429 + (T)n Simple_repeat Simple_repeat 1 33 0 4 647 349 323 52 30 chr15 8201745 8201879 -95293095 - RSINE1 SINE B4 -27 138 2 4 647 4361 45 9 0 chr15 8202987 8203514 -95291460 + L1Md_F2 LINE L1 5055 5586 -297 4 647 8097 50 7 2 chr15 8203515 8204505 -95290469 + L1Md_F2 LINE L1 5588 6582 0 4 647 862 153 227 0 chr15 8204748 8204924 -95290050 + B3 SINE B2 1 216 0 4 647 709 122 26 0 chr15 8204941 8205056 -95289918 + B1_Mus1 SINE Alu 31 148 0 4 647 468 240 40 0 chr15 8205190 8205290 -95289684 - B1_Mur3 SINE Alu -45 104 1 4 647 1126 82 0 0 chr15 8205456 8205602 -95289372 + B1_Mus2 SINE Alu 2 147 0 4 647 631 200 69 0 chr15 8205621 8205751 -95289223 + B1_Mur3 SINE Alu 2 140 -9 4 647 636 233 75 37 chr15 8205808 8206022 -95288952 + ID_B1 SINE B4 2 223 -1 4 647 6979 79 80 36 chr15 8206146 8207202 -95287772 - Lx3_Mus LINE L1 0 7009 5908 4 647 896 256 9 5 chr15 8207553 8207765 -95287209 + B3 SINE B2 3 215 -1 5 647 250 283 174 74 chr15 8207948 8208097 -95286877 + B4A SINE B4 9 172 -120 5 647 23 33 0 0 chr15 8208219 8208249 -95286725 + AT_rich Low_complexity Low_complexity 1 30 0 5 647 306 105 52 17 chr15 8208433 8208491 -95286483 - B1_Mus2 SINE Alu -20 127 68 5 647 349 325 172 3 chr15 8208704 8209007 -95285967 + L1MC4a LINE L1 7370 7723 -159 5 647 27 0 0 0 chr15 8209097 8209124 -95285850 + AT_rich Low_complexity Low_complexity 1 27 0 5 647 897 232 11 0 chr15 8209159 8209344 -95285630 - B3 SINE B2 -28 188 2 5 647 441 231 189 7 chr15 8209376 8209524 -95285450 - B3A SINE B2 -22 176 2 5 647 183 80 0 0 chr15 8209972 8209997 -95284977 + (CATA)n Simple_repeat Simple_repeat 3 27 0 5 647 201 74 0 0 chr15 8210076 8210103 -95284871 + (CATA)n Simple_repeat Simple_repeat 2 28 0 5 647 1522 39 39 0 chr15 8210240 8210422 -95284552 + B2_Mm2 SINE B2 1 189 -6 5 647 1546 48 11 0 chr15 8211012 8211201 -95283773 + B2_Mm1t SINE B2 1 191 -2 5 647 1229 48 0 0 chr15 8211348 8211495 -95283479 - B1_Mus1 SINE Alu 0 148 2 5 647 746 231 15 26 chr15 8211563 8211758 -95283216 - B3 SINE B2 -14 202 10 5 647 561 282 0 0 chr15 8211939 8212056 -95282918 - RSINE1 SINE B4 -46 119 3 5 647 302 256 55 11 chr15 8212093 8212184 -95282790 - PB1D10 SINE Alu -7 113 19 5 647 384 260 41 10 chr15 8212683 8212780 -95282194 - B1F1 SINE Alu -43 106 7 5 647 444 213 222 11 chr15 8213081 8213257 -95281717 - ID_B1 SINE B4 -11 213 1 5 647 22 56 0 0 chr15 8214004 8214040 -95280934 + AT_rich Low_complexity Low_complexity 1 36 0 5 647 1234 28 7 0 chr15 8214080 8214225 -95280749 - B1_Mus2 SINE Alu 0 147 2 5 647 1214 83 60 16 chr15 8214760 8214944 -95280030 - B2_Mm2 SINE B2 -2 193 2 5 647 259 326 19 77 chr15 8215696 8215852 -95279122 + B4A SINE B4 78 224 -68 5 647 707 146 14 49 chr15 8215712 8215856 -95279118 + B1_Mur3 SINE Alu 10 148 -1 5 647 607 40 444 0 chr15 8215868 8215967 -95279007 + B1_Mus1 SINE Alu 1 143 -5 5 647 519 266 0 9 chr15 8215978 8216088 -95278886 + PB1 SINE Alu 9 117 -10 5 647 349 151 68 0 chr15 8216818 8216891 -95278083 - B3 SINE B2 -5 211 134 5 647 301 232 12 24 chr15 8216862 8216946 -95278028 - B2_Mm2 SINE B2 -112 83 1 5 647 478 194 196 30 chr15 8217015 8217148 -95277826 + ID_B1 SINE B4 70 224 0 5 647 734 108 0 9 chr15 8217037 8217149 -95277825 + PB1D9 SINE Alu 10 120 0 5 647 393 313 37 33 chr15 8217160 8217401 -95277573 + L1M3 LINE L1 2287 2528 -3612 5 647 596 158 11 27 chr15 8217794 8217924 -95277050 + B1_Mus1 SINE Alu 1 127 -23 5 647 234 0 0 0 chr15 8217924 8217950 -95277024 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 5 647 576 176 35 42 chr15 8217950 8217961 -95277013 + B1_Mur4 SINE Alu 128 140 -10 5 647 233 256 158 43 chr15 8218175 8218359 -95276615 + RLTR15 LTR ERVK 1 205 -154 5 647 427 152 237 18 chr15 8219044 8219158 -95275816 + URR1B DNA MER1_type 44 182 -43 5 647 301 284 31 10 chr15 8220321 8220417 -95274557 - ID_B1 SINE B4 -29 195 98 5 647 405 320 45 26 chr15 8221424 8221578 -95273396 - RSINE1 SINE B4 0 165 9 5 647 234 273 0 0 chr15 8221853 8221908 -95273066 + ID4_ SINE ID 29 83 0 5 647 643 284 77 8 chr15 8222507 8222872 -95272102 + L1M2 LINE L1 2698 3087 -3056 5 647 662 246 51 0 chr15 8222872 8223010 -95271964 + RSINE1 SINE B4 3 147 -18 5 647 318 237 0 62 chr15 8223050 8223082 -95271892 + L1M2 LINE L1 3971 4000 -2143 5 647 1228 77 49 6 chr15 8223082 8223265 -95271709 + B2_Mm2 SINE B2 1 191 -4 5 647 318 237 0 62 chr15 8223265 8223313 -95271661 + L1M2 LINE L1 4001 4046 -2097 5 647 925 58 188 0 chr15 8223384 8223522 -95271452 + MT2C_Mm LTR ERVL 312 475 0 5 647 1154 217 145 24 chr15 8223651 8224024 -95270950 - MTD LTR MaLR -1 418 1 5 647 261 242 0 142 chr15 8224088 8224194 -95270780 - MT2B LTR ERVL -329 272 182 5 647 562 225 9 0 chr15 8224099 8224210 -95270764 - B1_Mur2 SINE Alu -36 113 2 5 647 318 316 17 25 chr15 8224104 8224224 -95270750 - ID_B1 SINE B4 -38 186 68 5 647 270 266 96 0 chr15 8224213 8224307 -95270667 - PB1D10 SINE Alu -13 104 2 5 647 231 88 0 0 chr15 8224363 8224397 -95270577 + (A)n Simple_repeat Simple_repeat 1 34 0 5 647 256 246 84 8 chr15 8224431 8224550 -95270424 + L1M2 LINE L1 4430 4557 -1583 5 647 363 105 0 0 chr15 8224596 8224653 -95270321 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 647 233 293 0 0 chr15 8224707 8224765 -95270209 - MT2A LTR ERVL -133 400 343 5 647 523 327 36 43 chr15 8224766 8225095 -95269879 - MT2A LTR ERVL -107 426 100 5 647 985 107 0 28 chr15 8225169 8225313 -95269661 - B1_Mm SINE Alu 0 147 8 5 647 247 146 0 0 chr15 8225344 8225385 -95269589 - BC1_Mm scRNA scRNA -57 95 55 5 647 583 286 75 85 chr15 8225390 8225803 -95269171 + L1M2 LINE L1 4555 4963 -1180 5 647 3145 109 23 12 chr15 8225803 8226285 -95268689 - RLTR1C LTR ERV1 -16 487 1 5 647 593 124 22 57 chr15 8226285 8226433 -95268541 - RLTR1B-int LTR ERV1 0 3299 3221 5 647 5085 99 8 8 chr15 8226418 8227175 -95267799 - MMVL30-int LTR ERV1 -68 3630 2874 5 647 3096 44 0 11 chr15 8227367 8227736 -95267238 + RLTR10B2 LTR ERVK 1 365 0 5 647 4932 102 37 8 chr15 8227965 8228772 -95266202 - MMVL30-int LTR ERV1 -2409 2654 1500 5 647 570 143 56 126 chr15 8228839 8229116 -95265858 - MMVL30-int LTR ERV1 -2187 1511 964 5 647 2147 107 0 9 chr15 8229197 8229517 -95265457 - MMVL30-int LTR ERV1 -2245 1453 1137 5 647 453 201 99 141 chr15 8229677 8229794 -95265180 - MMVL30-int LTR ERV1 -2521 778 669 5 647 1193 87 6 0 chr15 8229794 8229966 -95265008 + (TTTC)n Simple_repeat Simple_repeat 2 174 0 5 647 453 201 99 141 chr15 8229966 8230160 -95264814 - MMVL30-int LTR ERV1 -2631 668 482 5 647 1526 210 124 119 chr15 8230266 8230872 -95264102 - MMERGLN-int LTR ERV1 -6933 623 15 5 647 1668 171 21 9 chr15 8230887 8231205 -95263769 - RLTR1C LTR ERV1 0 507 185 5 647 1642 87 29 9 chr15 8231206 8231543 -95263431 - IAPEY3-int LTR ERVK -161 7420 7146 5 647 336 294 12 0 chr15 8232380 8232465 -95262509 + RSINE1 SINE B4 78 163 -2 5 647 195 42 0 0 chr15 8232483 8232507 -95262467 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 647 964 139 14 0 chr15 8232560 8232704 -95262270 - B1_Mus1 SINE Alu 0 148 3 5 647 273 141 12 71 chr15 8233200 8233284 -95261690 + Lx5 LINE L1 6968 7046 -4 5 647 311 333 17 50 chr15 8233350 8233470 -95261504 + B3A SINE B2 83 198 0 5 647 656 233 96 27 chr15 8233485 8233668 -95261306 + B3 SINE B2 2 216 0 5 647 306 0 0 0 chr15 8233762 8233796 -95261178 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 647 1165 98 28 11 chr15 8235263 8235439 -95259535 + B2_Mm1t SINE B2 1 179 -14 5 647 279 247 70 4 chr15 8236982 8237078 -95257896 - PB1 SINE Alu -5 112 10 5 647 27 49 0 0 chr15 8237248 8237289 -95257685 + AT_rich Low_complexity Low_complexity 1 41 0 5 647 186 43 0 0 chr15 8237460 8237483 -95257491 + (GCCTG)n Simple_repeat Simple_repeat 4 26 0 5 647 23 33 0 0 chr15 8237666 8237696 -95257278 + AT_rich Low_complexity Low_complexity 1 30 0 5 647 453 208 20 30 chr15 8238168 8238267 -95256707 + B4A SINE B4 1 98 -194 5 647 321 266 95 16 chr15 8239051 8239177 -95255797 + B1F SINE Alu 1 136 -13 5 647 1036 80 0 0 chr15 8239179 8239316 -95255658 - B1_Mus1 SINE Alu 0 148 12 5 647 544 256 63 122 chr15 8239182 8239387 -95255587 - B4 SINE B4 -69 223 31 5 647 363 291 194 38 chr15 8242439 8242625 -95252349 - MER58A DNA MER1_type 0 224 10 5 647 227 222 67 0 chr15 8242685 8242730 -95252244 - PB1D9 SINE Alu -68 52 5 5 647 308 262 71 0 chr15 8242768 8242852 -95252122 + PB1D9 SINE Alu 14 103 -17 5 647 375 313 72 13 chr15 8243636 8243788 -95251186 - RSINE1 SINE B4 -1 164 4 5 647 398 303 9 18 chr15 8243843 8243954 -95251020 - RSINE1 SINE B4 -54 111 2 5 647 1207 181 246 15 chr15 8244445 8244787 -95250187 + MTC LTR MaLR 1 421 0 5 647 1175 54 0 0 chr15 8244850 8244997 -95249977 - B1_Mus2 SINE Alu 0 147 1 5 647 298 287 57 56 chr15 8245031 8245162 -95249812 - B3A SINE B2 -43 173 1 5 647 1936 91 34 0 chr15 8246067 8246387 -95248587 - MusHAL1 LINE L1 -600 2112 1782 5 647 756 126 38 30 chr15 8246559 8246690 -95248284 + B1_Mus1 SINE Alu 17 148 0 5 647 203 296 25 0 chr15 8246981 8247062 -95247912 + GA-rich Low_complexity Low_complexity 1 83 0 5 647 710 199 14 14 chr15 8247379 8247527 -95247447 + B1_Mur2 SINE Alu 2 149 0 5 647 290 229 171 68 chr15 8247596 8247713 -95247261 + B1F SINE Alu 1 129 -20 5 647 217 286 27 54 chr15 8247980 8248054 -95246920 - B4 SINE B4 -217 75 4 5 647 722 78 19 10 chr15 8248092 8248196 -95246778 - PB1D9 SINE Alu -15 105 1 5 647 822 227 39 39 chr15 8248219 8248425 -95246549 - B3 SINE B2 -10 206 1 5 647 386 273 43 52 chr15 8248533 8248649 -95246325 - B1F2 SINE Alu -34 115 1 5 647 186 344 15 69 chr15 8249698 8249829 -95245145 + L2a LINE L2 3303 3426 0 5 647 519 164 81 9 chr15 8249990 8250101 -95244873 + PB1D9 SINE Alu 1 119 -1 5 647 232 223 404 0 chr15 8250269 8250363 -95244611 + RSINE1 SINE B4 1 132 -33 5 647 21 57 0 0 chr15 8250395 8250430 -95244544 + AT_rich Low_complexity Low_complexity 1 35 0 5 647 180 0 0 0 chr15 8251951 8251971 -95243003 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 647 290 239 13 90 chr15 8252225 8252303 -95242671 - ID4 SINE ID 0 83 12 5 647 861 245 14 9 chr15 8253802 8254016 -95240958 + MIRc SINE MIR 2 216 -52 5 647 1196 68 102 0 chr15 8254425 8254602 -95240372 - B2_Mm2 SINE B2 0 195 1 5 647 666 191 28 42 chr15 8254797 8254939 -95240035 - B1_Mur1 SINE Alu -9 140 1 6 647 219 69 0 0 chr15 8256030 8256059 -95238915 + (GGGA)n Simple_repeat Simple_repeat 1 29 0 6 647 294 365 14 55 chr15 8256077 8256222 -95238752 - RSINE1 SINE B4 -24 141 3 6 647 848 269 20 5 chr15 8256375 8256573 -95238401 - B3 SINE B2 -15 201 1 6 647 873 177 0 13 chr15 8257156 8257305 -95237669 - B1_Mus1 SINE Alu -1 147 1 6 648 393 102 0 0 chr15 8258079 8258138 -95236836 + (TATG)n Simple_repeat Simple_repeat 3 61 0 6 648 288 257 156 74 chr15 8258484 8258606 -95236368 + MER20 DNA MER1_type 6 137 -82 6 648 21 36 0 0 chr15 8258666 8258694 -95236280 + AT_rich Low_complexity Low_complexity 1 28 0 6 648 1048 230 9 5 chr15 8258786 8259000 -95235974 - B3 SINE B2 0 216 2 6 648 599 204 22 22 chr15 8259225 8259360 -95235614 - B1_Mus2 SINE Alu -12 135 1 6 648 25 0 0 0 chr15 8259467 8259492 -95235482 + AT_rich Low_complexity Low_complexity 1 25 0 6 648 1135 106 39 0 chr15 8260191 8260370 -95234604 + B2_Mm1t SINE B2 2 187 -6 6 648 25 0 0 0 chr15 8260505 8260530 -95234444 + AT_rich Low_complexity Low_complexity 1 25 0 6 648 590 131 171 54 chr15 8260986 8261115 -95233859 + B1_Mus2 SINE Alu 1 144 -3 6 648 22 35 0 0 chr15 8261805 8261834 -95233140 + AT_rich Low_complexity Low_complexity 1 29 0 6 648 21 36 0 0 chr15 8261932 8261960 -95233014 + AT_rich Low_complexity Low_complexity 1 28 0 6 648 263 348 0 0 chr15 8263036 8263125 -95231849 + MER3 DNA MER1_type 5 93 -116 6 648 432 0 0 0 chr15 8263266 8263314 -95231660 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 6 648 894 237 52 0 chr15 8263314 8263508 -95231466 - B3 SINE B2 -6 210 7 6 648 240 254 79 0 chr15 8263657 8263720 -95231254 - PB1D9 SINE Alu -9 111 44 6 648 1485 47 10 15 chr15 8263864 8264059 -95230915 + B2_Mm2 SINE B2 2 195 0 6 648 815 112 0 16 chr15 8264139 8264266 -95230708 - B2_Mm2 SINE B2 -2 193 69 6 648 7242 71 11 17 chr15 8264376 8265881 -95229093 + L1_Mus1 LINE L1 5066 6567 0 6 648 27 0 0 26 chr15 8265928 8265948 -95229026 + AT_rich Low_complexity Low_complexity 1 20 0 6 648 231 0 77 0 chr15 8265948 8265987 -95228987 + (TTATA)n Simple_repeat Simple_repeat 1 42 0 6 648 27 0 0 26 chr15 8265987 8266004 -95228970 + AT_rich Low_complexity Low_complexity 1 17 0 6 648 23 33 0 0 chr15 8266037 8266067 -95228907 + AT_rich Low_complexity Low_complexity 1 30 0 6 648 679 213 15 7 chr15 8266068 8266205 -95228769 - B1_Mur1 SINE Alu -11 138 1 6 648 233 302 31 0 chr15 8266368 8266464 -95228510 - L1M5 LINE L1 -547 5693 5595 6 648 578 169 212 0 chr15 8266763 8266881 -95228093 - B1_Mus1 SINE Alu 0 148 6 6 648 744 302 29 34 chr15 8267039 8267245 -95227729 - B3 SINE B2 -8 208 4 6 648 689 122 47 0 chr15 8267245 8267345 -95227629 + B1_Mur4 SINE Alu 31 135 -15 6 648 686 330 62 18 chr15 8267387 8267659 -95227315 + B4A SINE B4 4 287 -5 6 648 637 205 106 156 chr15 8267885 8268122 -95226852 + URR1A DNA MER1_type 2 226 0 6 648 421 202 158 5 chr15 8268459 8268643 -95226331 + Lx9 LINE L1 7432 7643 -1 6 648 486 0 0 0 chr15 8269004 8269058 -95225916 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 6 648 1171 30 0 0 chr15 8269060 8269195 -95225779 - B1_Mus2 SINE Alu -12 135 1 6 648 21 36 0 0 chr15 8269794 8269822 -95225152 + AT_rich Low_complexity Low_complexity 1 28 0 6 648 688 241 45 17 chr15 8269832 8270009 -95224965 - B3A SINE B2 -16 182 1 6 648 928 291 8 75 chr15 8270049 8270355 -95224619 - B4A SINE B4 0 292 1 6 648 1152 272 143 3 chr15 8270381 8270463 -95224511 + MTC LTR MaLR 1 95 -312 6 648 2125 62 4 4 chr15 8270463 8270739 -95224235 + L1_Mus1 LINE L1 6288 6563 -4 6 648 1249 196 62 0 chr15 8270739 8271013 -95223961 + MTC LTR MaLR 96 421 0 6 648 4684 178 146 35 chr15 8271013 8272146 -95222828 + MTC-int LTR MaLR 1 1258 0 6 648 505 188 69 0 chr15 8272146 8272247 -95222727 + MTC LTR MaLR 1 108 -313 6 648 23 33 0 0 chr15 8272737 8272767 -95222207 + AT_rich Low_complexity Low_complexity 1 30 0 6 648 28 61 0 0 chr15 8273304 8273353 -95221621 + AT_rich Low_complexity Low_complexity 1 49 0 6 648 775 137 12 131 chr15 8275409 8275577 -95219397 + B1_Mus1 SINE Alu 1 148 0 6 648 219 311 64 51 chr15 8275866 8275944 -95219030 - B1F SINE Alu -69 80 2 6 648 341 189 108 0 chr15 8276426 8276500 -95218474 - B4A SINE B4 -207 85 4 6 648 22 0 0 0 chr15 8276961 8276983 -95217991 + AT_rich Low_complexity Low_complexity 1 22 0 6 648 2372 68 12 12 chr15 8278503 8278828 -95216146 + ORR1A2 LTR MaLR 2 326 -1 6 648 1317 172 11 9 chr15 8279518 8279779 -95215195 + RLTR11B LTR ERVK 3 271 -256 6 648 836 159 235 0 chr15 8280454 8280624 -95214350 - B3 SINE B2 -6 210 1 6 648 28 0 0 0 chr15 8280692 8280720 -95214254 + AT_rich Low_complexity Low_complexity 1 28 0 6 648 499 336 0 0 chr15 8280873 8281007 -95213967 - B1F2 SINE Alu -14 135 2 6 648 365 0 0 22 chr15 8281040 8281086 -95213888 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 6 648 663 260 26 7 chr15 8281087 8281238 -95213736 - RSINE1 SINE B4 -2 163 10 6 648 277 221 100 29 chr15 8281615 8281685 -95213289 - B3 SINE B2 -6 210 136 6 648 651 283 37 48 chr15 8281690 8281879 -95213095 - B3 SINE B2 -28 188 2 6 648 303 28 0 0 chr15 8284761 8284797 -95210177 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 6 648 669 154 93 22 chr15 8285729 8285868 -95209106 + B1_Mur4 SINE Alu 2 150 0 6 648 230 193 105 0 chr15 8286033 8286090 -95208884 + RSINE1 SINE B4 75 137 -28 6 648 434 273 91 0 chr15 8287198 8287341 -95207633 + LTR33 LTR ERVL 59 214 -301 6 648 795 163 52 0 chr15 8287864 8287999 -95206975 - B1_Mus2 SINE Alu -5 142 1 6 648 201 179 0 25 chr15 8288707 8288747 -95206227 + T-rich Low_complexity Low_complexity 3 41 0 6 648 380 212 159 55 chr15 8290085 8290230 -95204744 - RSINE1 SINE B4 -4 161 2 6 648 25 0 0 0 chr15 8290931 8290956 -95204018 + AT_rich Low_complexity Low_complexity 1 25 0 6 648 408 259 103 32 chr15 8292995 8293218 -95201756 + L2c LINE L2 3079 3320 -55 6 648 23 54 0 0 chr15 8293720 8293757 -95201217 + AT_rich Low_complexity Low_complexity 1 37 0 6 648 25 65 0 0 chr15 8293770 8293816 -95201158 + AT_rich Low_complexity Low_complexity 1 46 0 6 648 205 191 0 0 chr15 8295011 8295053 -95199921 + A-rich Low_complexity Low_complexity 1 42 0 6 648 523 320 12 44 chr15 8295511 8295671 -95199303 - RSINE1 SINE B4 -3 162 8 6 648 437 245 70 35 chr15 8295749 8295863 -95199111 - B1_Mur1 SINE Alu -25 124 7 6 648 253 319 56 72 chr15 8295752 8295877 -95199097 - ID_B1 SINE B4 -25 199 77 6 648 22 0 0 0 chr15 8296934 8296956 -95198018 + AT_rich Low_complexity Low_complexity 1 22 0 6 648 22 56 0 0 chr15 8297040 8297076 -95197898 + AT_rich Low_complexity Low_complexity 1 36 0 6 648 577 285 95 175 chr15 8297206 8297618 -95197356 + MTE2b LTR MaLR 1 379 0 6 648 1060 95 0 7 chr15 8298215 8298363 -95196611 - B1_Mus2 SINE Alu 0 147 1 6 648 285 355 46 7 chr15 8298436 8298589 -95196385 - RSINE1 SINE B4 -2 163 5 6 648 646 188 93 8 chr15 8298598 8298727 -95196247 - B1_Mur2 SINE Alu 0 149 10 6 648 672 178 89 0 chr15 8298809 8298944 -95196030 + B1_Mus2 SINE Alu 1 147 0 6 648 290 262 247 19 chr15 8299150 8299304 -95195670 + MER3 DNA MER1_type 16 204 -5 6 648 22 0 0 0 chr15 8300052 8300074 -95194900 + AT_rich Low_complexity Low_complexity 1 22 0 6 648 211 216 59 0 chr15 8302419 8302470 -95192504 - B1F SINE Alu -27 122 69 6 648 278 269 25 13 chr15 8303098 8303177 -95191797 + ID4 SINE ID 1 80 -3 6 648 22 0 0 0 chr15 8303831 8303853 -95191121 + AT_rich Low_complexity Low_complexity 1 22 0 6 648 3350 89 6 24 chr15 8303996 8304491 -95190483 - L1_Mus3 LINE L1 0 6638 6153 6 648 252 0 0 0 chr15 8305950 8305978 -95188996 + (T)n Simple_repeat Simple_repeat 1 28 0 6 648 642 193 186 6 chr15 8306637 8306809 -95188165 - B3 SINE B2 -13 203 1 6 648 453 264 125 6 chr15 8306809 8306977 -95187997 - B3A SINE B2 -10 188 1 6 648 191 140 20 0 chr15 8307520 8307570 -95187404 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 648 447 285 36 7 chr15 8308191 8308329 -95186645 - B1F SINE Alu -6 143 2 6 648 292 339 92 8 chr15 8309428 8309559 -95185415 - B1F2 SINE Alu -7 142 1 6 648 576 0 0 0 chr15 8309907 8309971 -95185003 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 6 648 218 284 0 0 chr15 8310221 8310288 -95184686 + T-rich Low_complexity Low_complexity 1 67 0 6 648 397 206 42 32 chr15 8310406 8310501 -95184473 - PB1D9 SINE Alu -3 117 22 6 648 23 33 0 0 chr15 8311882 8311912 -95183062 + AT_rich Low_complexity Low_complexity 1 30 0 6 648 289 265 0 0 chr15 8311995 8312063 -95182911 + ID_B1 SINE B4 157 224 0 6 648 676 272 99 5 chr15 8312273 8312480 -95182494 - ID_B1 SINE B4 -44 248 28 6 648 682 216 0 63 chr15 8312830 8312973 -95182001 + B1_Mur2 SINE Alu 1 134 -15 6 648 220 191 14 29 chr15 8313000 8313070 -95181904 + A-rich Low_complexity Low_complexity 4 72 0 6 648 275 312 103 34 chr15 8313559 8313705 -95181269 + ID_B1 SINE B4 67 222 -2 6 648 321 310 0 0 chr15 8313713 8313784 -95181190 + ID4_ SINE ID 12 82 -1 7 648 319 248 134 17 chr15 8313962 8314081 -95180893 + L1M5 LINE L1 3068 3200 -2946 7 648 713 187 75 0 chr15 8314256 8314390 -95180584 + B1_Mur4 SINE Alu 5 148 -2 7 648 876 46 0 0 chr15 8314405 8314514 -95180460 + (GAAA)n Simple_repeat Simple_repeat 2 110 0 7 648 878 183 87 44 chr15 8315127 8315333 -95179641 + B3 SINE B2 2 216 0 7 648 21 71 0 0 chr15 8315673 8315715 -95179259 + AT_rich Low_complexity Low_complexity 1 42 0 7 648 378 0 0 0 chr15 8316247 8316289 -95178685 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 648 334 254 0 0 chr15 8316315 8316378 -95178596 - ID4_ SINE ID -19 64 2 7 648 300 333 13 13 chr15 8316951 8317030 -95177944 - ID4 SINE ID -4 79 1 7 648 210 71 0 0 chr15 8317189 8317217 -95177757 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 648 198 0 0 0 chr15 8317225 8317247 -95177727 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 7 648 1144 88 0 0 chr15 8317260 8317407 -95177567 - B1_Mus1 SINE Alu 0 148 2 7 648 21 0 0 0 chr15 8317649 8317670 -95177304 + AT_rich Low_complexity Low_complexity 1 21 0 7 648 590 280 68 11 chr15 8317671 8317862 -95177112 - B3 SINE B2 -11 205 4 7 648 795 314 7 81 chr15 8318501 8318809 -95176165 + B4A SINE B4 8 292 0 7 648 461 250 78 99 chr15 8319038 8319180 -95175794 + B3 SINE B2 51 189 -6 7 648 356 262 50 0 chr15 8320128 8320208 -95174766 - 5S rRNA rRNA -37 84 1 7 648 290 282 0 27 chr15 8320246 8320319 -95174655 + RSINE1 SINE B4 78 148 -17 7 648 450 284 38 31 chr15 8320868 8321028 -95173946 - RSINE1 SINE B4 -3 162 2 7 648 777 185 0 8 chr15 8321466 8321616 -95173358 - B1_Mur1 SINE Alu -6 144 3 7 648 301 316 20 10 chr15 8321632 8321731 -95173243 + PB1D7 SINE Alu 10 109 -11 7 648 501 305 121 0 chr15 8321715 8321889 -95173085 + ID_B1 SINE B4 6 200 -24 7 648 24 67 0 0 chr15 8322432 8322477 -95172497 + AT_rich Low_complexity Low_complexity 1 45 0 7 648 216 0 0 0 chr15 8322730 8322754 -95172220 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 7 648 401 276 85 84 chr15 8324200 8324437 -95170537 - MIR SINE MIR -8 260 2 7 648 360 327 25 13 chr15 8324812 8324970 -95170004 - RSINE1 SINE B4 -3 162 3 7 648 327 324 27 18 chr15 8324981 8325091 -95169883 - PB1D10 SINE Alu -6 111 1 7 648 295 299 133 67 chr15 8325244 8325409 -95169565 - B2_Mm2 SINE B2 -8 187 12 7 648 226 183 164 16 chr15 8325772 8325833 -95169141 - ID4_ SINE ID -2 81 12 7 648 269 275 92 92 chr15 8325982 8326102 -95168872 + RSINE1 SINE B4 15 134 -31 7 648 183 42 0 0 chr15 8326371 8326395 -95168579 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 648 769 59 0 0 chr15 8327083 8327185 -95167789 - B1_Mus1 SINE Alu -46 102 1 7 648 345 260 65 0 chr15 8327277 8327354 -95167620 + B4A SINE B4 5 86 -206 7 648 566 260 66 13 chr15 8327386 8327538 -95167436 + B3A SINE B2 1 160 -38 7 648 464 300 76 8 chr15 8327563 8327694 -95167280 + B4 SINE B4 84 223 -69 7 648 406 214 71 0 chr15 8327713 8327797 -95167177 + B1_Mur2 SINE Alu 3 92 -57 7 648 1191 48 0 0 chr15 8327888 8328033 -95166941 + B1_Mus2 SINE Alu 3 147 0 7 648 202 286 18 0 chr15 8328231 8328287 -95166687 - MIRm SINE MIR -136 140 84 7 648 340 328 67 50 chr15 8328398 8328578 -95166396 + MIR SINE MIR 80 262 0 7 648 1122 65 32 25 chr15 8328711 8328868 -95166106 + B2_Mm2 SINE B2 1 158 -37 7 648 21 36 0 0 chr15 8328965 8328993 -95165981 + AT_rich Low_complexity Low_complexity 1 28 0 7 648 238 239 14 43 chr15 8329529 8329599 -95165375 + ID4_ SINE ID 14 81 -2 7 648 384 248 53 107 chr15 8329777 8329908 -95165066 + RSINE1 SINE B4 42 165 0 7 648 189 0 0 0 chr15 8330065 8330086 -95164888 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 7 648 639 88 0 0 chr15 8330385 8330476 -95164498 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 7 648 420 231 52 41 chr15 8330476 8330583 -95164391 - PB1D10 SINE Alu -8 109 4 7 648 368 304 72 30 chr15 8330896 8331062 -95163912 + B4A SINE B4 106 278 -14 7 648 476 209 323 0 chr15 8331911 8332069 -95162905 + ID_B1 SINE B4 8 216 -8 7 648 566 85 49 0 chr15 8332681 8332763 -95162211 - Lx2 LINE L1 -694 6303 6218 7 648 4543 91 43 1 chr15 8332763 8333300 -95161674 + Lx2 LINE L1 6321 6866 -131 7 648 183 80 0 0 chr15 8333300 8333325 -95161649 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 7 648 4543 91 43 1 chr15 8333325 8333437 -95161537 + Lx2 LINE L1 6867 6996 -1 7 648 237 206 58 108 chr15 8333437 8333486 -95161488 - Lx3A LINE L1 -761 6220 6181 7 648 1583 42 5 0 chr15 8333705 8333896 -95161078 + B2_Mm1a SINE B2 1 192 -1 7 648 1018 242 0 5 chr15 8333912 8334111 -95160863 + B3 SINE B2 5 202 -14 7 648 270 0 0 0 chr15 8334774 8334804 -95160170 + (TG)n Simple_repeat Simple_repeat 2 31 0 7 648 681 81 20 29 chr15 8334905 8335007 -95159967 - B2_Mm1t SINE B2 -91 102 2 7 648 357 254 56 14 chr15 8335031 8335175 -95159799 - L1MD LINE L1 -912 5234 5085 7 648 1150 64 0 0 chr15 8335358 8335498 -95159476 - B1_Mus2 SINE Alu -6 141 2 7 648 3416 77 56 0 chr15 8335667 8336146 -95158828 - L1_Mus3 LINE L1 -1 6637 6132 7 648 1024 70 190 0 chr15 8336583 8336741 -95158233 + B2_Mm2 SINE B2 2 189 -6 7 648 523 248 42 6 chr15 8337195 8337381 -95157593 + L1MD2 LINE L1 5049 5309 -837 7 648 398 206 92 0 chr15 8337382 8337488 -95157486 + PB1D9 SINE Alu 32 150 0 7 648 975 229 161 32 chr15 8337490 8337838 -95157136 + Lx8 LINE L1 5234 5626 -221 7 648 246 62 0 0 chr15 8337838 8337870 -95157104 + (TCCC)n Simple_repeat Simple_repeat 2 33 0 7 648 597 198 124 0 chr15 8337897 8338018 -95156956 - B1_Mur2 SINE Alu -13 136 1 7 648 272 214 10 39 chr15 8338272 8338374 -95156600 + (TA)n Simple_repeat Simple_repeat 1 99 0 7 648 5401 51 0 1 chr15 8338374 8339047 -95155927 - L1Md_F2 LINE L1 0 6582 5911 7 648 2152 206 71 93 chr15 8339047 8339736 -95155238 - Lx9 LINE L1 -12 7632 6959 7 648 415 269 253 17 chr15 8339773 8339947 -95155027 + Lx8 LINE L1 6204 6418 -1055 7 648 1524 217 110 38 chr15 8339947 8340549 -95154425 + ORR1D-int LTR MaLR 584 1403 -106 7 648 493 238 57 9 chr15 8340552 8340658 -95154316 + PB1D10 SINE Alu 1 111 -6 7 648 311 278 112 95 chr15 8340818 8340948 -95154026 + L1MD2 LINE L1 5681 5811 -548 7 648 1408 79 5 0 chr15 8340948 8341138 -95153836 + B2_Mm1t SINE B2 2 192 -1 7 648 311 278 112 95 chr15 8341138 8341186 -95153788 + L1MD2 LINE L1 5812 5861 -498 7 648 470 191 69 52 chr15 8341359 8341475 -95153499 - Tigger5 DNA MER2_type -2163 243 126 7 648 286 236 13 191 chr15 8341714 8341871 -95153103 - L1MC4 LINE L1 -84 7958 7830 7 648 410 349 0 15 chr15 8342271 8342402 -95152572 - MER5A DNA MER1_type -54 135 7 7 648 315 0 0 0 chr15 8342632 8342667 -95152307 + (TAA)n Simple_repeat Simple_repeat 1 35 0 7 648 896 237 19 5 chr15 8343232 8343444 -95151530 + B3 SINE B2 1 215 -1 7 648 884 202 11 27 chr15 8343594 8343782 -95151192 + B2_Mm2 SINE B2 1 185 -10 7 648 198 386 28 17 chr15 8343817 8343996 -95150978 - L4 LINE RTE -511 1518 1338 7 648 335 165 132 0 chr15 8344043 8344123 -95150851 - B3 SINE B2 -74 121 30 7 648 243 286 29 0 chr15 8344225 8344295 -95150679 + ID_B1 SINE B4 152 223 -1 7 648 200 317 122 34 chr15 8344670 8344817 -95150157 - MIRb SINE MIR -29 239 80 7 648 420 91 0 0 chr15 8345317 8345383 -95149591 + (CA)n Simple_repeat Simple_repeat 2 67 0 7 648 261 297 69 0 chr15 8345390 8345491 -95149483 + L1MC4a LINE L1 5826 5933 -1949 7 648 361 294 88 35 chr15 8345954 8346180 -95148794 + MLT1C LTR MaLR 221 458 -9 7 648 435 19 0 0 chr15 8346524 8346576 -95148398 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 648 1270 113 11 0 chr15 8346909 8347095 -95147879 - B2_Mm1t SINE B2 -4 189 2 7 648 321 256 45 23 chr15 8347109 8347197 -95147777 + PB1D10 SINE Alu 26 115 -2 7 648 21 36 0 0 chr15 8347490 8347518 -95147456 + AT_rich Low_complexity Low_complexity 1 28 0 7 648 713 255 135 16 chr15 8347661 8348051 -95146923 + L1MEc LINE L1 2268 2695 -3624 7 648 342 67 0 0 chr15 8348233 8348278 -95146696 + (GAAA)n Simple_repeat Simple_repeat 2 46 0 7 648 252 0 0 0 chr15 8348278 8348306 -95146668 + (GGGA)n Simple_repeat Simple_repeat 1 28 0 7 648 786 239 214 51 chr15 8348329 8349055 -95145919 + L1MEc LINE L1 3068 3911 -2408 7 648 351 0 0 0 chr15 8349813 8349852 -95145122 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 648 806 250 98 31 chr15 8350044 8350238 -95144736 + B3 SINE B2 9 215 -1 7 648 490 195 7 126 chr15 8350608 8350743 -95144231 - PB1D9 SINE Alu 0 120 2 7 648 5846 116 50 25 chr15 8351191 8352172 -95142802 + Lx4A LINE L1 6053 7058 0 7 648 207 0 0 0 chr15 8352324 8352347 -95142627 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 648 290 87 22 0 chr15 8352431 8352477 -95142497 + (TA)n Simple_repeat Simple_repeat 2 48 0 7 648 691 276 136 62 chr15 8353040 8353304 -95141670 + B4A SINE B4 21 292 0 7 648 234 0 0 0 chr15 8353424 8353450 -95141524 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 648 637 305 25 45 chr15 8354001 8354200 -95140774 - B3A SINE B2 -3 195 1 7 648 642 296 97 48 chr15 8354528 8354952 -95140022 + MLT1H1 LTR MaLR 2 546 -9 7 648 192 360 79 10 chr15 8355620 8355721 -95139253 - MIRb SINE MIR -22 246 139 7 648 210 284 135 10 chr15 8356042 8356138 -95138836 - MIR SINE MIR -147 115 8 7 648 297 75 0 0 chr15 8356916 8356956 -95138018 + (TC)n Simple_repeat Simple_repeat 2 41 0 8 648 180 111 0 0 chr15 8356957 8356984 -95137990 + (CATA)n Simple_repeat Simple_repeat 4 30 0 8 648 568 261 244 0 chr15 8358018 8358194 -95136780 + B4A SINE B4 3 221 -71 8 648 234 0 0 0 chr15 8358194 8358220 -95136754 + (CAAAAA)n Simple_repeat Simple_repeat 5 30 0 8 648 255 125 0 0 chr15 8358219 8358259 -95136715 + (GGGA)n Simple_repeat Simple_repeat 4 43 0 8 648 297 0 0 0 chr15 8358363 8358396 -95136578 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 648 614 237 7 28 chr15 8359009 8359152 -95135822 + B1_Mur1 SINE Alu 5 144 -5 8 648 3046 47 39 0 chr15 8359237 8359618 -95135356 + MTA_Mm LTR MaLR 1 396 0 8 648 248 349 85 31 chr15 8359930 8360060 -95134914 + MLT1I LTR MaLR 101 237 -174 8 648 236 326 139 0 chr15 8360368 8360454 -95134520 + PB1D10 SINE Alu 2 99 -18 8 648 648 223 112 63 chr15 8360486 8360817 -95134157 - L1MC4 LINE L1 -215 7827 7481 8 648 3524 203 111 20 chr15 8361903 8362703 -95132271 + Lx8 LINE L1 6201 7073 -400 8 648 541 169 264 28 chr15 8363056 8363238 -95131736 + URR1B DNA MER1_type 1 225 0 8 648 1279 274 72 6 chr15 8363372 8363721 -95131253 + MTE2b LTR MaLR 1 372 -7 8 648 742 294 29 33 chr15 8363722 8363996 -95130978 + B4A SINE B4 4 276 -16 8 648 230 226 0 0 chr15 8364013 8364066 -95130908 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 648 314 354 76 64 chr15 8364398 8364570 -95130404 + B4A SINE B4 2 175 -117 8 648 250 250 44 0 chr15 8364614 8364682 -95130292 + ID2 SINE ID 10 80 -3 8 648 1701 26 0 0 chr15 8364901 8365094 -95129880 - B2_Mm1a SINE B2 0 193 1 8 648 872 189 61 27 chr15 8365584 8365882 -95129092 - ORR1D1 LTR MaLR 0 384 1 8 648 24 0 0 0 chr15 8366034 8366058 -95128916 + AT_rich Low_complexity Low_complexity 1 24 0 8 648 225 0 0 0 chr15 8366472 8366497 -95128477 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 648 433 233 185 8 chr15 8366500 8366630 -95128344 - B3A SINE B2 -44 154 2 8 648 342 225 56 0 chr15 8366735 8366824 -95128150 + MER5A1 DNA MER1_type 29 122 -44 8 648 728 250 119 34 chr15 8366995 8367264 -95127710 + B4 SINE B4 1 292 0 8 648 201 175 0 0 chr15 8367288 8367328 -95127646 + GA-rich Low_complexity Low_complexity 1 40 0 8 648 188 125 50 0 chr15 8367858 8367898 -95127076 + (CATA)n Simple_repeat Simple_repeat 2 43 0 8 648 571 321 84 38 chr15 8367914 8368176 -95126798 - B4A SINE B4 -18 274 1 8 648 21 0 0 0 chr15 8368185 8368206 -95126768 + AT_rich Low_complexity Low_complexity 1 21 0 8 648 356 258 51 10 chr15 8368225 8368323 -95126651 + MLT1F2 LTR MaLR 457 558 -2 8 648 229 286 38 38 chr15 8368343 8368423 -95126551 - PB1D10 SINE Alu -8 109 30 8 648 1303 248 133 0 chr15 8368560 8368883 -95126091 + ORR1D2 LTR MaLR 1 366 -4 8 648 265 304 38 12 chr15 8369511 8369591 -95125383 - MIRm SINE MIR 0 276 195 8 648 261 281 88 22 chr15 8369926 8370017 -95124957 - MIRm SINE MIR -25 251 155 8 648 465 247 151 16 chr15 8370308 8370493 -95124481 - B3 SINE B2 -6 210 1 8 648 243 0 0 0 chr15 8371075 8371102 -95123872 + (CCCCG)n Simple_repeat Simple_repeat 3 29 0 8 648 1582 43 0 0 chr15 8371337 8371525 -95123449 - B2_Mm1a SINE B2 -4 189 2 8 648 714 207 60 56 chr15 8371681 8371896 -95123078 + B3 SINE B2 1 216 0 8 648 23 0 0 0 chr15 8372218 8372241 -95122733 + AT_rich Low_complexity Low_complexity 1 23 0 8 648 291 311 17 94 chr15 8372279 8372396 -95122578 - RSINE1 SINE B4 -1 164 57 8 648 216 0 0 0 chr15 8373756 8373780 -95121194 + (T)n Simple_repeat Simple_repeat 1 24 0 8 648 282 292 82 26 chr15 8374360 8374592 -95120382 + L1MB5 LINE L1 4432 4676 -1470 8 648 395 336 36 21 chr15 8374780 8374920 -95120054 - RSINE1 SINE B4 -19 146 5 8 648 410 321 18 0 chr15 8374943 8375055 -95119919 - PB1D10 SINE Alu -3 114 1 8 648 372 228 131 131 chr15 8375065 8375333 -95119641 + L1MB5 LINE L1 4858 5125 -1021 8 648 472 289 71 32 chr15 8375421 8375575 -95119399 + RSINE1 SINE B4 6 165 0 8 648 563 297 62 83 chr15 8375610 8375955 -95119019 + L1MB5 LINE L1 5494 5826 -348 8 648 698 272 92 42 chr15 8375955 8376216 -95118758 + B4A SINE B4 1 274 -18 8 648 441 328 63 86 chr15 8376216 8376496 -95118478 + L1MB5 LINE L1 5827 6102 -82 8 648 777 314 157 3 chr15 8376498 8376836 -95118138 + Tigger7 DNA MER2_type 7 396 -2095 8 648 1185 35 14 0 chr15 8376849 8376993 -95117981 + B1_Mus1 SINE Alu 2 147 -1 8 648 267 31 0 0 chr15 8377175 8377207 -95117767 + (GA)n Simple_repeat Simple_repeat 2 33 0 8 648 404 318 75 30 chr15 8377354 8377487 -95117487 - B1_Mur1 SINE Alu -8 141 3 8 648 617 213 103 60 chr15 8378054 8378190 -95116784 + B3A SINE B2 1 150 -48 8 648 261 0 0 0 chr15 8378190 8378219 -95116755 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 648 617 213 103 60 chr15 8378219 8378267 -95116707 + B3A SINE B2 151 193 -5 8 648 2011 115 73 70 chr15 8378409 8378792 -95116182 + ORR1C2 LTR MaLR 1 384 0 8 648 849 336 8 29 chr15 8379513 8379822 -95115152 - B4A SINE B4 0 292 1 8 648 2700 153 97 19 chr15 8380184 8380625 -95114349 + RLTR20D LTR ERVK 1 475 -93 8 648 447 19 0 0 chr15 8380625 8380677 -95114297 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 648 2700 153 97 19 chr15 8380677 8380762 -95114212 + RLTR20D LTR ERVK 476 567 -1 8 648 28 29 0 0 chr15 8381013 8381048 -95113926 + AT_rich Low_complexity Low_complexity 1 35 0 8 648 23 54 0 0 chr15 8381917 8381954 -95113020 + AT_rich Low_complexity Low_complexity 1 37 0 8 648 1257 110 11 0 chr15 8382132 8382323 -95112651 + B2_Mm1t SINE B2 1 193 0 8 648 22 56 0 0 chr15 8382381 8382417 -95112557 + AT_rich Low_complexity Low_complexity 1 36 0 8 648 1098 83 14 0 chr15 8382421 8382566 -95112408 + B1_Mm SINE Alu 1 147 0 8 648 216 0 0 0 chr15 8382566 8382590 -95112384 + (A)n Simple_repeat Simple_repeat 1 24 0 8 648 584 235 37 43 chr15 8382917 8383105 -95111869 + L1_Mur3 LINE L1 5282 5480 -704 8 648 234 0 0 0 chr15 8383283 8383309 -95111665 + (TC)n Simple_repeat Simple_repeat 1 26 0 8 648 587 284 110 0 chr15 8383375 8383530 -95111444 + B3A SINE B2 21 192 -6 8 648 900 111 0 0 chr15 8383533 8383668 -95111306 + (TTTC)n Simple_repeat Simple_repeat 2 136 0 8 648 380 233 140 28 chr15 8383931 8384061 -95110913 + B1F SINE Alu 4 148 -1 8 648 757 235 43 33 chr15 8384063 8384274 -95110700 + B3 SINE B2 4 216 0 8 648 676 251 54 98 chr15 8384634 8384712 -95110262 + L1ME1 LINE L1 5821 5896 -283 8 648 1155 81 0 0 chr15 8384712 8384860 -95110114 + B1_Mus1 SINE Alu 1 148 0 8 648 676 251 54 98 chr15 8384860 8385077 -95109897 + L1ME1 LINE L1 5897 6103 -76 8 648 1147 74 0 0 chr15 8385281 8385429 -95109545 - B1_Mus1 SINE Alu 0 148 1 8 648 1275 256 184 20 chr15 8385447 8386032 -95108942 + RCHARR1 DNA MER1_type 4 684 -290 8 648 609 221 0 32 chr15 8386040 8386166 -95108808 + B1_Mur1 SINE Alu 28 149 0 8 648 1163 170 36 95 chr15 8386181 8386237 -95108737 + RCHARR1 DNA MER1_type 688 745 -229 8 648 180 0 0 0 chr15 8386237 8386257 -95108717 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 8 648 1163 170 36 95 chr15 8386257 8386373 -95108601 + RCHARR1 DNA MER1_type 746 869 -105 8 648 945 230 29 5 chr15 8386373 8386583 -95108391 - B3 SINE B2 -1 215 1 8 648 1163 170 36 95 chr15 8386583 8386714 -95108260 + RCHARR1 DNA MER1_type 870 973 -1 8 648 1065 67 0 0 chr15 8386939 8387074 -95107900 + B1_Mus1 SINE Alu 5 139 -9 8 648 261 0 0 0 chr15 8387074 8387103 -95107871 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8 648 23 0 0 0 chr15 8387526 8387549 -95107425 + AT_rich Low_complexity Low_complexity 1 23 0 8 648 915 209 61 10 chr15 8387847 8388045 -95106929 + B3 SINE B2 3 210 -6 8 648 263 368 55 14 chr15 8388058 8388204 -95106770 + MIRb SINE MIR 4 155 -113 8 648 199 222 68 41 chr15 8388260 8388359 -95106615 + MIR SINE MIR 16 118 -158 8 648 385 244 133 8 chr15 8388463 8388583 -95106391 + B1F2 SINE Alu 3 137 -12 8 649 356 203 65 48 chr15 8388771 8388895 -95106079 + PB1 SINE Alu 2 127 0 8 649 232 206 290 11 chr15 8388958 8389051 -95105923 + PB1D9 SINE Alu 2 120 0 8 649 318 346 36 30 chr15 8389567 8389734 -95105240 + MIRb SINE MIR 88 255 -13 8 649 342 0 0 0 chr15 8390369 8390407 -95104567 + (TA)n Simple_repeat Simple_repeat 1 38 0 8 649 319 256 22 0 chr15 8390407 8390497 -95104477 + HAL1-3A_ME LINE L1 1975 2066 -792 8 649 22 80 0 0 chr15 8390572 8390622 -95104352 + AT_rich Low_complexity Low_complexity 1 50 0 8 649 219 69 0 0 chr15 8393911 8393940 -95101034 + (CCG)n Simple_repeat Simple_repeat 2 30 0 8 649 213 94 0 0 chr15 8394070 8394102 -95100872 + (CCG)n Simple_repeat Simple_repeat 1 32 0 8 649 212 100 0 24 chr15 8394479 8394520 -95100454 + (GGGA)n Simple_repeat Simple_repeat 2 41 0 8 649 549 44 0 0 chr15 8394524 8394592 -95100382 + (TG)n Simple_repeat Simple_repeat 2 69 0 8 649 213 39 0 0 chr15 8394714 8394740 -95100234 + (CCG)n Simple_repeat Simple_repeat 2 27 0 8 649 249 163 0 0 chr15 8394793 8394842 -95100132 + (CGG)n Simple_repeat Simple_repeat 3 51 0 8 649 23 0 0 0 chr15 8395123 8395146 -95099828 + GC_rich Low_complexity Low_complexity 1 23 0 8 649 273 57 0 0 chr15 8395382 8395417 -95099557 + (T)n Simple_repeat Simple_repeat 1 35 0 8 649 219 69 0 0 chr15 8395718 8395747 -95099227 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 8 649 26 0 0 0 chr15 8395823 8395849 -95099125 + AT_rich Low_complexity Low_complexity 1 26 0 8 649 235 242 3 0 chr15 8396763 8396821 -95098153 - L2a LINE L2 -5 3421 3324 8 649 512 300 119 34 chr15 8397440 8397709 -95097265 - B4 SINE B4 0 292 1 8 649 419 259 28 0 chr15 8397930 8398038 -95096936 - PB1D7 SINE Alu -3 117 7 9 649 24 0 0 0 chr15 8398350 8398374 -95096600 + AT_rich Low_complexity Low_complexity 1 24 0 9 649 237 65 0 0 chr15 8398492 8398523 -95096451 + (T)n Simple_repeat Simple_repeat 1 31 0 9 649 1005 91 28 7 chr15 8398523 8398667 -95096307 - B1_Mus1 SINE Alu 0 148 2 9 649 510 219 131 0 chr15 8398936 8399073 -95095901 - B3A SINE B2 -43 155 1 9 649 610 183 26 78 chr15 8399109 8399263 -95095711 - B1_Mur2 SINE Alu -2 147 2 9 649 276 261 20 60 chr15 8399945 8400001 -95094973 + MER112 DNA MER1_type 100 157 -104 9 649 723 170 63 14 chr15 8400001 8400144 -95094830 - B1_Mur4 SINE Alu 0 150 1 9 649 276 261 20 60 chr15 8400144 8400238 -95094736 + MER112 DNA MER1_type 158 244 -17 9 649 1196 75 0 0 chr15 8401542 8401689 -95093285 + B1_Mus2 SINE Alu 1 147 0 9 649 344 62 0 0 chr15 8402631 8402679 -95092295 + B1_Mur4 SINE Alu 103 150 0 9 649 219 69 0 0 chr15 8402679 8402708 -95092266 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 9 649 1175 104 60 0 chr15 8403769 8403951 -95091023 + B2_Mm1t SINE B2 1 193 0 9 649 1124 75 0 0 chr15 8403954 8404100 -95090874 + B1_Mus1 SINE Alu 1 146 -2 9 649 1210 62 0 0 chr15 8404318 8404464 -95090510 + B1_Mus2 SINE Alu 2 147 0 9 649 440 137 155 21 chr15 8404698 8404795 -95090179 + PB1D10 SINE Alu 6 115 -2 9 649 878 195 119 48 chr15 8404875 8404956 -95090018 + URR1A DNA MER1_type 2 99 -127 9 649 1185 62 0 0 chr15 8404956 8405101 -95089873 - B1_Mus2 SINE Alu 0 147 3 9 649 878 195 119 48 chr15 8405101 8405229 -95089745 + URR1A DNA MER1_type 100 226 0 9 649 180 0 0 0 chr15 8405761 8405781 -95089193 + (TTG)n Simple_repeat Simple_repeat 2 21 0 9 649 1124 138 127 5 chr15 8406063 8406260 -95088714 + URR1A DNA MER1_type 6 226 0 9 649 912 135 7 26 chr15 8406352 8406504 -95088470 + B1_Mur3 SINE Alu 1 149 0 9 649 681 192 30 0 chr15 8406517 8406684 -95088290 + GA-rich Low_complexity Low_complexity 1 172 0 9 649 239 324 156 14 chr15 8407427 8407568 -95087406 + RSINE1 SINE B4 4 164 -1 9 649 420 20 0 0 chr15 8407709 8407758 -95087216 + (TA)n Simple_repeat Simple_repeat 2 50 0 9 649 420 250 122 0 chr15 8407875 8408055 -95086919 + L1MB7 LINE L1 4900 5101 -1045 9 649 347 296 122 78 chr15 8408135 8408340 -95086634 + L1MB7 LINE L1 5190 5403 -743 9 649 426 302 91 91 chr15 8408383 8409056 -95085918 + L1MB7 LINE L1 5496 6168 -16 9 649 1212 313 78 43 chr15 8409089 8409743 -95085231 - Charlie13a DNA Charlie -305 1209 533 9 649 346 284 30 45 chr15 8409724 8409857 -95085117 + B1F SINE Alu 14 144 -5 9 649 528 262 15 53 chr15 8409940 8410073 -95084901 + ID_B1 SINE B4 87 214 -10 9 649 279 310 0 0 chr15 8410654 8410725 -95084249 - ID4 SINE ID -11 72 2 9 649 434 270 70 70 chr15 8410915 8411114 -95083860 + L2 LINE L2 2694 2892 -527 9 649 308 243 13 63 chr15 8411593 8411672 -95083302 - B4A SINE B4 -214 78 4 9 649 825 295 14 43 chr15 8412350 8412630 -95082344 + B4A SINE B4 10 281 -11 9 649 441 276 61 0 chr15 8412762 8412860 -95082114 + ID_B1 SINE B4 79 182 -42 9 649 248 325 62 0 chr15 8413044 8413124 -95081850 + PB1D10 SINE Alu 2 86 -31 9 649 486 46 0 0 chr15 8413154 8413219 -95081755 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 9 649 665 221 58 69 chr15 8414558 8414587 -95080387 - B3 SINE B2 -28 188 165 9 649 315 0 0 0 chr15 8414587 8414622 -95080352 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 9 649 1329 31 0 0 chr15 8414622 8414781 -95080193 - B2_Mm1a SINE B2 -33 160 2 9 649 1221 48 0 0 chr15 8415501 8415648 -95079326 - B1_Mus1 SINE Alu 0 148 2 9 649 212 87 65 0 chr15 8415712 8415758 -95079216 + (GGGTG)n Simple_repeat Simple_repeat 3 51 0 9 649 708 12 0 0 chr15 8415926 8416007 -95078967 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 9 649 800 247 71 0 chr15 8416778 8416948 -95078026 - B3 SINE B2 -28 188 7 9 649 183 42 0 0 chr15 8416980 8417004 -95077970 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 9 649 261 0 0 0 chr15 8417007 8417036 -95077938 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 9 649 1177 55 0 0 chr15 8417036 8417182 -95077792 - B1_Mus1 SINE Alu -1 147 2 9 649 358 142 13 33 chr15 8417224 8417299 -95077675 - B2_Mm2 SINE B2 -93 123 47 9 649 1296 85 6 6 chr15 8417366 8417544 -95077430 - B2_Mm1t SINE B2 -14 179 2 9 649 502 201 15 54 chr15 8417617 8417878 -95077096 + CT-rich Low_complexity Low_complexity 1 251 0 9 649 601 274 59 0 chr15 8418220 8418355 -95076619 - RSINE1 SINE B4 -21 144 2 9 649 733 228 7 0 chr15 8418390 8418535 -95076439 + B1_Mur1 SINE Alu 1 146 -3 9 649 305 304 0 74 chr15 8419176 8419297 -95075677 + MTE2b LTR MaLR 8 119 -260 9 649 517 261 45 13 chr15 8419325 8419480 -95075494 + MTE2b LTR MaLR 183 342 -37 9 649 1083 56 35 7 chr15 8419562 8419705 -95075269 + B1_Mus2 SINE Alu 1 147 0 9 649 2087 92 43 0 chr15 8419907 8420212 -95074762 + ORR1A2 LTR MaLR 1 318 -9 9 649 236 372 151 17 chr15 8421527 8421765 -95073209 - L2a LINE L2 -210 3216 2947 9 649 720 153 86 31 chr15 8422269 8422431 -95072543 + MTD LTR MaLR 249 419 0 9 649 504 0 0 0 chr15 8422519 8422575 -95072399 + (CA)n Simple_repeat Simple_repeat 2 57 0 9 649 3782 64 71 2 chr15 8422617 8423136 -95071838 - LTRIS2 LTR ERV1 0 564 10 9 649 2911 49 0 0 chr15 8423155 8423501 -95071473 - ORR1A1 LTR MaLR 0 346 1 9 649 22 0 0 0 chr15 8423651 8423673 -95071301 + AT_rich Low_complexity Low_complexity 1 22 0 9 649 555 203 69 23 chr15 8425158 8425289 -95069685 + B1_Mus1 SINE Alu 2 138 -10 9 649 575 187 0 23 chr15 8425290 8425465 -95069509 + GA-rich Low_complexity Low_complexity 2 172 0 9 649 854 242 156 13 chr15 8425916 8426344 -95068630 - MTD LTR MaLR -92 327 5 9 649 1653 124 14 221 chr15 8426911 8427427 -95067547 + RMER17C LTR ERVK 2 410 0 9 649 2842 101 43 38 chr15 8427697 8428140 -95066834 - MT2B2 LTR ERVL 0 584 140 9 649 335 208 237 0 chr15 8428141 8428348 -95066626 - L1MA9 LINE L1 -64 6248 5993 9 649 841 326 128 65 chr15 8428355 8429060 -95065914 + L2 LINE L2 715 1463 -1956 9 649 416 321 49 23 chr15 8429188 8429505 -95065469 + MLT1A0 LTR MaLR 11 408 0 9 649 184 274 32 16 chr15 8430000 8430063 -95064911 - MIRb SINE MIR -29 239 176 9 649 387 0 0 0 chr15 8430437 8430480 -95064494 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 649 243 61 0 0 chr15 8430534 8430567 -95064407 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 649 207 69 0 0 chr15 8430621 8430650 -95064324 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 649 567 269 61 55 chr15 8430734 8430915 -95064059 - ID_B1 SINE B4 -7 217 36 9 649 250 271 34 0 chr15 8431077 8431136 -95063838 + ID4 SINE ID 1 61 -22 9 649 1236 67 0 0 chr15 8431145 8431325 -95063649 + (CA)n Simple_repeat Simple_repeat 1 180 0 9 649 453 290 18 12 chr15 8431570 8431741 -95063233 - L1MC4 LINE L1 -428 7614 7443 9 649 33 25 0 0 chr15 8431802 8431842 -95063132 + AT_rich Low_complexity Low_complexity 1 40 0 9 649 256 284 91 84 chr15 8431991 8432145 -95062829 - MLT1A1 LTR MaLR -253 155 1 9 649 577 270 101 0 chr15 8432328 8432476 -95062498 + RSINE1 SINE B4 3 165 0 9 649 22 35 0 0 chr15 8432476 8432505 -95062469 + AT_rich Low_complexity Low_complexity 1 29 0 9 649 637 247 23 120 chr15 8432620 8432647 -95062327 - B3A SINE B2 0 198 170 9 649 332 119 17 0 chr15 8432647 8432706 -95062268 + (TATG)n Simple_repeat Simple_repeat 1 60 0 9 649 734 203 1 126 chr15 8432706 8432894 -95062080 - B3 SINE B2 -29 169 4 9 649 1075 88 0 39 chr15 8432899 8433052 -95061922 - B1_Mus1 SINE Alu 0 148 2 9 649 224 320 68 0 chr15 8433362 8433465 -95061509 - MIRb SINE MIR -29 239 130 9 649 3257 87 0 13 chr15 8433479 8433935 -95061039 + L1Md_F2 LINE L1 6131 6580 -2 9 649 183 80 0 0 chr15 8434384 8434409 -95060565 + (TA)n Simple_repeat Simple_repeat 1 25 0 9 649 2139 160 24 11 chr15 8434529 8434908 -95060066 + ORR1C2 LTR MaLR 1 384 0 9 649 226 306 14 0 chr15 8436033 8436105 -95058869 - ID4_ SINE ID -9 74 2 9 649 451 267 120 43 chr15 8436335 8436381 -95058593 - B3A SINE B2 0 198 152 9 649 180 0 0 0 chr15 8436381 8436401 -95058573 + (TG)n Simple_repeat Simple_repeat 1 20 0 9 649 461 200 139 51 chr15 8436401 8436538 -95058436 - B3 SINE B2 -67 149 1 9 649 23 54 0 0 chr15 8436545 8436582 -95058392 + AT_rich Low_complexity Low_complexity 1 37 0 9 649 1281 34 0 0 chr15 8436689 8436836 -95058138 + B1_Mus1 SINE Alu 2 148 0 9 649 755 307 164 19 chr15 8437515 8437930 -95057044 - MLT1G1 LTR MaLR 0 579 105 9 649 584 280 25 13 chr15 8438018 8438177 -95056797 + RSINE1 SINE B4 2 162 -3 9 649 228 35 0 0 chr15 8438194 8438223 -95056751 + (TA)n Simple_repeat Simple_repeat 2 30 0 9 649 1161 62 0 0 chr15 8438227 8438373 -95056601 + B1_Mus2 SINE Alu 2 147 0 9 649 403 130 26 0 chr15 8438373 8438450 -95056524 + GA-rich Low_complexity Low_complexity 2 80 0 9 649 288 0 0 0 chr15 8438472 8438504 -95056470 + (TA)n Simple_repeat Simple_repeat 1 32 0 9 649 375 23 0 0 chr15 8438504 8438547 -95056427 + (GA)n Simple_repeat Simple_repeat 2 45 0 9 649 406 213 64 9 chr15 8438777 8438886 -95056088 - PB1D10 SINE Alu -1 116 2 9 649 32 0 0 0 chr15 8439130 8439162 -95055812 + AT_rich Low_complexity Low_complexity 1 32 0 9 649 741 296 105 22 chr15 8439437 8439761 -95055213 - ORR1E LTR MaLR -8 351 1 9 649 225 290 10 39 chr15 8439988 8440092 -95054882 + Charlie18a DNA MER1_type 96 196 -146 9 649 295 276 0 62 chr15 8440547 8440659 -95054315 - L2c LINE L2 -52 3335 3231 9 649 238 276 63 0 chr15 8441128 8441255 -95053719 + (AAATG)n Simple_repeat Simple_repeat 4 138 0 9 649 1381 69 6 0 chr15 8441482 8441656 -95053318 + B2_Mm1t SINE B2 1 175 -18 1 649 315 105 0 0 chr15 8441656 8441713 -95053261 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 1 649 1190 68 0 0 chr15 8441737 8441883 -95053091 + B1_Mus2 SINE Alu 2 147 0 1 649 497 73 24 0 chr15 8441886 8441968 -95053006 + (TCTA)n Simple_repeat Simple_repeat 3 86 0 1 649 471 286 161 21 chr15 8442242 8442709 -95052265 + L1M4 LINE L1 4901 5415 -764 1 649 411 197 0 38 chr15 8442836 8442915 -95052059 - B1F SINE Alu 0 149 74 1 649 1097 49 0 20 chr15 8442955 8443101 -95051873 - B1_Mus1 SINE Alu 0 148 6 1 649 273 269 9 3 chr15 8443106 8443170 -95051804 - PB1D10 SINE Alu -53 96 31 1 649 180 0 0 0 chr15 8443530 8443550 -95051424 + (A)n Simple_repeat Simple_repeat 1 20 0 1 649 539 246 32 97 chr15 8443550 8443746 -95051228 + B3A SINE B2 27 210 -6 1 649 1202 155 44 13 chr15 8443876 8444105 -95050869 - Lx5 LINE L1 -3 7047 6812 1 649 702 0 0 0 chr15 8444339 8444417 -95050557 + (TTTTC)n Simple_repeat Simple_repeat 3 80 0 1 649 771 189 0 0 chr15 8444419 8444505 -95050469 + polypyrimidine Low_complexity Low_complexity 76 161 0 1 649 1119 129 0 0 chr15 8444505 8444683 -95050291 + (TTC)n Simple_repeat Simple_repeat 3 180 0 1 649 771 189 0 0 chr15 8444683 8444755 -95050219 + polypyrimidine Low_complexity Low_complexity 4 75 0 1 649 670 68 164 33 chr15 8444766 8444888 -95050086 - B1_Mus2 SINE Alu -6 141 4 1 649 238 282 35 0 chr15 8445196 8445281 -95049693 - Tigger13a DNA MER2_type -537 234 147 1 649 1115 62 14 7 chr15 8445701 8445847 -95049127 - B1_Mm SINE Alu 0 147 1 1 649 501 198 21 0 chr15 8446593 8446689 -95048285 + PB1D7 SINE Alu 22 119 -1 1 649 1241 61 0 0 chr15 8446796 8446944 -95048030 - B1_Mus1 SINE Alu 0 148 1 1 649 267 289 100 22 chr15 8447012 8447181 -95047793 - MER33 DNA MER1_type -30 294 105 1 649 893 158 147 37 chr15 8447181 8447372 -95047602 - B3 SINE B2 0 216 5 1 649 267 289 100 22 chr15 8447372 8447432 -95047542 - MER33 DNA MER1_type -220 104 47 1 649 234 62 0 0 chr15 8447699 8447731 -95047243 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 1 649 2014 294 62 64 chr15 8447739 8448800 -95046174 - Lx8 LINE L1 -239 7234 6176 1 649 260 315 33 33 chr15 8449111 8449321 -95045653 - RLTR15 LTR ERVK -18 341 132 1 649 331 184 99 99 chr15 8449403 8449524 -95045450 - RLTR15 LTR ERVK -238 121 1 1 649 871 276 1 14 chr15 8449524 8449768 -95045206 - Lx8 LINE L1 -1072 5904 5628 1 649 2014 280 48 93 chr15 8449770 8451053 -95043921 + Lx8 LINE L1 4416 5641 -239 1 649 1882 247 106 68 chr15 8451068 8451548 -95043426 - L1MB4 LINE L1 -105 6075 5574 1 649 450 0 0 0 chr15 8451548 8451598 -95043376 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 649 1882 245 86 53 chr15 8451598 8451971 -95043003 - L1MB4 LINE L1 -607 5573 5191 1 649 21 0 0 0 chr15 8452101 8452122 -95042852 + AT_rich Low_complexity Low_complexity 1 21 0 1 649 244 250 41 52 chr15 8452798 8452895 -95042079 + MamRep564 Unknown Unknown 103 198 -159 1 649 974 251 58 25 chr15 8452942 8453216 -95041758 - B4A SINE B4 -8 284 2 1 649 711 105 0 0 chr15 8453246 8453351 -95041623 + B2_Mm2 SINE B2 3 107 -88 1 649 200 186 0 103 chr15 8453354 8453432 -95041542 + A-rich Low_complexity Low_complexity 4 73 0 1 649 470 232 159 0 chr15 8453497 8453648 -95041326 - B3 SINE B2 -15 201 27 1 649 658 200 19 65 chr15 8453667 8453822 -95041152 - B1_Mur4 SINE Alu 0 150 3 1 649 240 35 0 0 chr15 8453935 8453964 -95041010 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1 649 2202 101 9 58 chr15 8454447 8454793 -95040181 - ORR1A4 LTR MaLR 0 329 1 1 649 192 217 126 32 chr15 8455362 8455457 -95039517 - L2a LINE L2 -107 3319 3216 1 649 1109 174 92 0 chr15 8455977 8456184 -95038790 - URR1A DNA MER1_type 0 226 1 1 649 412 266 85 67 chr15 8456206 8456371 -95038603 + MTEa LTR MaLR 66 233 -146 1 649 299 235 20 96 chr15 8456980 8457126 -95037848 + L1M5 LINE L1 5688 5822 -418 1 649 477 80 0 0 chr15 8457312 8457387 -95037587 + (TC)n Simple_repeat Simple_repeat 2 76 0 1 649 2746 260 86 14 chr15 8457554 8458620 -95036354 + Lx6 LINE L1 6082 7448 -12 1 649 980 193 55 15 chr15 8458628 8458828 -95036146 + B3 SINE B2 2 209 -7 1 649 359 240 0 30 chr15 8459085 8459152 -95035822 + B3A SINE B2 88 151 -47 1 649 918 130 0 0 chr15 8459152 8459329 -95035645 + (CA)n Simple_repeat Simple_repeat 2 178 0 1 649 359 245 26 32 chr15 8459329 8459373 -95035601 + B3A SINE B2 152 203 -13 1 649 228 146 24 0 chr15 8459375 8459416 -95035558 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 649 315 0 0 0 chr15 8459642 8459677 -95035297 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 649 1126 116 18 11 chr15 8459807 8460012 -95034962 + B2_Mm2 SINE B2 1 211 -5 1 649 300 186 0 0 chr15 8460066 8460125 -95034849 + GA-rich Low_complexity Low_complexity 2 60 0 1 649 326 198 37 28 chr15 8460512 8460621 -95034353 - Lx9 LINE L1 -4 7640 7531 1 649 1000 46 0 0 chr15 8460646 8460777 -95034197 - B1_Mus1 SINE Alu 0 148 18 1 649 1210 185 53 47 chr15 8460779 8460989 -95033985 - Lx9 LINE L1 -101 7543 7329 1 649 1713 26 0 0 chr15 8460989 8461181 -95033793 - B2_Mm1a SINE B2 -1 192 1 1 649 1210 185 53 47 chr15 8461181 8461270 -95033704 - Lx9 LINE L1 -316 7328 7242 1 649 264 294 106 19 chr15 8461768 8461872 -95033102 + MLT1A LTR MaLR 15 127 -247 1 649 900 271 15 53 chr15 8461878 8462217 -95032757 - ORR1E LTR MaLR -2 357 32 1 649 229 333 96 51 chr15 8462465 8462642 -95032332 + LTR33A_ LTR ERVL 126 310 -221 1 649 660 255 57 51 chr15 8462788 8462999 -95031975 + B3A SINE B2 1 213 -3 1 649 197 157 39 19 chr15 8463280 8463332 -95031642 - L2 LINE L2 -2553 866 814 1 649 290 184 13 0 chr15 8463598 8463674 -95031300 + CT-rich Low_complexity Low_complexity 2 78 0 1 649 282 116 0 0 chr15 8464198 8464241 -95030733 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 649 27 0 0 0 chr15 8464504 8464531 -95030443 + AT_rich Low_complexity Low_complexity 1 27 0 1 649 662 210 35 0 chr15 8464551 8464694 -95030280 - RSINE1 SINE B4 -15 150 3 1 649 300 27 0 0 chr15 8464700 8464737 -95030237 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 649 1136 65 0 0 chr15 8464737 8464875 -95030099 - B1_Mus2 SINE Alu -8 139 2 1 649 24 32 0 0 chr15 8465013 8465044 -95029930 + AT_rich Low_complexity Low_complexity 1 31 0 1 649 219 139 0 0 chr15 8465100 8465136 -95029838 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 649 2382 91 9 0 chr15 8465328 8465657 -95029317 - L1_Mus2 LINE L1 -7 6631 6300 1 649 8936 87 20 4 chr15 8465665 8466868 -95028106 - L1_Mus2 LINE L1 -624 5942 4732 1 649 603 0 0 0 chr15 8466868 8466935 -95028039 + (TTTTG)n Simple_repeat Simple_repeat 5 71 0 1 649 8936 98 11 6 chr15 8466935 8467039 -95027935 - L1_Mus2 LINE L1 -1152 4731 4628 1 649 812 152 29 14 chr15 8467494 8467634 -95027340 - B1_Mus1 SINE Alu -2 146 5 1 649 1612 46 0 5 chr15 8467780 8467975 -95026999 + B2_Mm2 SINE B2 1 194 -1 1 649 391 202 0 19 chr15 8470121 8470227 -95024747 + CT-rich Low_complexity Low_complexity 1 104 0 1 649 243 292 157 0 chr15 8470234 8470323 -95024651 - PB1D10 SINE Alu -5 112 10 1 649 741 234 57 0 chr15 8470789 8470964 -95024010 + B3A SINE B2 13 197 -1 1 649 783 149 15 0 chr15 8471089 8471223 -95023751 + B1_Mur4 SINE Alu 15 150 0 1 649 915 204 0 0 chr15 8471228 8471589 -95023385 + GA-rich Low_complexity Low_complexity 1 361 0 1 649 739 188 78 28 chr15 8472145 8472287 -95022687 + B1_Mur2 SINE Alu 1 149 0 1 649 2049 151 113 3 chr15 8472350 8472729 -95022245 - MTC LTR MaLR 0 421 1 1 649 423 0 0 0 chr15 8472891 8472938 -95022036 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 649 387 294 126 81 chr15 8473619 8473967 -95021007 - Charlie4a DNA MER1_type -35 473 110 1 649 377 309 19 9 chr15 8475151 8475259 -95019715 + PB1D10 SINE Alu 2 110 -7 1 649 526 264 81 0 chr15 8475513 8475661 -95019313 - RSINE1 SINE B4 0 165 6 1 649 350 314 35 70 chr15 8476786 8476957 -95018017 - RSINE1 SINE B4 0 165 1 1 649 491 43 14 0 chr15 8477110 8477180 -95017794 + (TTTTG)n Simple_repeat Simple_repeat 2 72 0 1 649 525 71 0 0 chr15 8477474 8477544 -95017430 + (TCC)n Simple_repeat Simple_repeat 3 72 0 1 649 451 311 40 109 chr15 8478292 8478643 -95016331 + ORR1E LTR MaLR 34 367 -3 1 649 739 248 0 7 chr15 8479964 8480114 -95014860 - B1_Mur2 SINE Alu 0 149 1 1 649 1102 209 10 5 chr15 8480131 8480338 -95014636 - B3 SINE B2 -8 208 1 1 649 1321 310 112 12 chr15 8480648 8481164 -95013810 + MLT1F1 LTR MaLR 1 568 -1 1 649 780 168 235 0 chr15 8481810 8481989 -95012985 - URR1B DNA MER1_type 0 225 5 1 649 477 0 0 0 chr15 8482009 8482062 -95012912 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 649 369 0 0 0 chr15 8482119 8482160 -95012814 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 649 354 23 0 0 chr15 8482217 8482260 -95012714 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 649 405 39 0 0 chr15 8482319 8482370 -95012604 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 649 460 238 159 0 chr15 8482381 8482532 -95012442 - L1MEc LINE L1 -5991 409 235 1 649 1172 75 0 0 chr15 8482884 8483031 -95011943 - B1_Mus1 SINE Alu 0 148 2 1 649 450 384 75 5 chr15 8483031 8483369 -95011605 - MLT1G3 LTR MaLR -38 541 161 1 649 774 166 31 19 chr15 8483821 8483981 -95010993 - MTD LTR MaLR -10 409 248 1 649 926 144 0 15 chr15 8483986 8484120 -95010854 + B1_Mus2 SINE Alu 3 134 -13 1 649 804 316 22 11 chr15 8484132 8484401 -95010573 - MTD LTR MaLR -130 289 18 1 649 265 210 48 0 chr15 8484579 8484641 -95010333 + MLT1D LTR MaLR 1 65 -440 1 649 309 314 128 52 chr15 8484963 8485412 -95009562 - MLT1C LTR MaLR 0 467 1 1 649 274 296 14 0 chr15 8485455 8485526 -95009448 - ERVL-E-int LTR ERVL -2394 3273 3202 1 649 2198 67 96 13 chr15 8486705 8487007 -95007967 + ORR1A2 LTR MaLR 1 327 0 1 649 207 0 0 0 chr15 8487546 8487569 -95007405 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1 649 552 289 97 24 chr15 8487682 8487980 -95006994 + L1MB7 LINE L1 5843 6162 -22 1 649 331 294 0 0 chr15 8488254 8488346 -95006628 + MLT1B LTR MaLR 298 389 -1 1 649 314 314 76 35 chr15 8488811 8488956 -95006018 - Charlie10b DNA MER1_type -14 228 78 1 649 319 97 56 0 chr15 8488956 8489028 -95005946 + (TCTCTG)n Simple_repeat Simple_repeat 2 77 0 1 649 252 0 0 0 chr15 8489032 8489060 -95005914 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 649 1415 81 11 0 chr15 8489216 8489402 -95005572 + B2_Mm1t SINE B2 1 188 -5 1 649 234 208 21 0 chr15 8489608 8489656 -95005318 + CT-rich Low_complexity Low_complexity 2 50 0 1 649 983 214 96 12 chr15 8489659 8489910 -95005064 + B4 SINE B4 5 276 -16 1 649 252 0 0 0 chr15 8489934 8489962 -95005012 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 649 466 191 153 7 chr15 8490406 8490543 -95004431 + Lx7 LINE L1 7191 7347 -349 1 649 212 59 29 0 chr15 8490545 8490579 -95004395 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 649 1191 54 0 0 chr15 8490581 8490729 -95004245 - B1_Mus1 SINE Alu 0 148 1 1 649 254 252 37 22 chr15 8490730 8490864 -95004110 + T-rich Low_complexity Low_complexity 2 137 0 1 649 259 247 123 0 chr15 8491176 8491257 -95003717 + MLT1H2 LTR MaLR 396 486 -3 1 649 285 196 71 61 chr15 8491847 8491945 -95003029 + ID_B1 SINE B4 124 222 -2 1 649 1363 94 5 5 chr15 8492005 8492198 -95002776 + B2_Mm2 SINE B2 3 195 0 1 649 313 88 0 50 chr15 8492973 8493033 -95001941 + (CCCCCT)n Simple_repeat Simple_repeat 2 58 0 1 649 305 312 30 46 chr15 8493074 8493205 -95001769 + MLT1D LTR MaLR 346 474 -31 1 649 613 276 47 14 chr15 8494284 8494497 -95000477 + ID_B1 SINE B4 5 224 0 1 649 40 21 0 0 chr15 8494940 8494987 -94999987 + AT_rich Low_complexity Low_complexity 1 47 0 1 649 743 257 27 27 chr15 8494990 8495210 -94999764 + ID_B1 SINE B4 3 222 -2 1 649 567 142 34 46 chr15 8495218 8495463 -94999511 + (CATATA)n Simple_repeat Simple_repeat 1 241 0 1 649 258 156 0 0 chr15 8495520 8495565 -94999409 + (TATATG)n Simple_repeat Simple_repeat 2 46 0 1 649 324 226 20 51 chr15 8496641 8496739 -94998235 - ORR1E LTR MaLR -10 369 275 1 649 1589 168 94 6 chr15 8496749 8497079 -94997895 - ORR1B2 LTR MaLR -8 359 1 1 649 477 273 34 81 chr15 8497089 8497181 -94997793 - ORR1E LTR MaLR -131 228 146 1 649 1123 82 0 33 chr15 8497181 8497333 -94997641 - B1_Mus1 SINE Alu 0 148 2 1 649 477 273 34 81 chr15 8497333 8497475 -94997499 - ORR1E LTR MaLR -214 145 5 1 649 303 299 23 0 chr15 8497473 8497560 -94997414 + MER5A DNA MER1_type 46 134 -55 1 649 601 278 188 19 chr15 8497729 8498037 -94996937 + MLT1C LTR MaLR 1 360 -107 1 649 2519 121 46 48 chr15 8498038 8498514 -94996460 - IAPLTR2_Mm LTR ERVK 0 475 1 1 649 13803 7 1 0 chr15 8498514 8500000 -94994974 - IAPEz-int LTR ERVK 0 6481 4994 1 649 13674 4 1 0 chr15 8500000 8501468 -94993506 - IAPEz-int LTR ERVK -1488 4993 3525 1 649 953 80 24 0 chr15 8501468 8501593 -94993381 - IAPEz-int LTR ERVK -2770 4910 4783 2 649 1876 111 4 4 chr15 8501588 8501850 -94993124 - IAPEz-int LTR ERVK -5183 2497 2236 2 649 454 66 0 32 chr15 8501839 8501902 -94993072 - IAPEz-int LTR ERVK -5062 1419 1359 2 649 4631 48 68 21 chr15 8501902 8502519 -94992455 - IAPEz-int LTR ERVK -5819 662 17 2 649 259 235 57 73 chr15 8502527 8502542 -94992432 + MLT1D LTR MaLR 381 394 -111 3 649 2509 124 46 48 chr15 8502542 8503018 -94991956 - IAPLTR2_Mm LTR ERVK 0 475 1 4 649 324 231 46 37 chr15 8503018 8503126 -94991848 + MLT1B LTR MaLR 279 387 -3 5 649 257 274 0 40 chr15 8503147 8503223 -94991751 + LTR16A1 LTR ERVL 384 456 0 6 649 440 274 38 59 chr15 8503668 8503854 -94991120 - MER20 DNA MER1_type -12 207 26 7 649 579 323 145 48 chr15 8504313 8504896 -94990078 - MLT1E1A LTR MaLR -11 613 1 8 649 1271 122 25 0 chr15 8505123 8505319 -94989655 - ORR1A2 LTR MaLR -102 225 25 9 649 1123 136 63 99 chr15 8505369 8505643 -94989331 + ORR1D1 LTR MaLR 1 288 -71 1 649 2227 88 6 0 chr15 8505649 8505966 -94989008 - ORR1A2 LTR MaLR -8 319 1 1 649 412 169 72 0 chr15 8505966 8506037 -94988937 + ORR1D1 LTR MaLR 298 374 0 1 649 251 231 0 44 chr15 8506065 8506133 -94988841 - B1_Mur4 SINE Alu -80 70 6 1 649 25 31 0 0 chr15 8506950 8506982 -94987992 + AT_rich Low_complexity Low_complexity 1 32 0 1 649 701 153 17 6 chr15 8507009 8507065 -94987909 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 649 3026 79 94 51 chr15 8507065 8507556 -94987418 + RLTR1B LTR ERV1 1 512 0 1 649 701 153 17 6 chr15 8507556 8507676 -94987298 + (TG)n Simple_repeat Simple_repeat 2 123 0 1 649 201 211 0 0 chr15 8507687 8507744 -94987230 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 649 550 274 78 0 chr15 8507746 8507899 -94987075 - RSINE1 SINE B4 0 165 1 1 649 267 105 35 17 chr15 8508446 8508504 -94986470 + CT-rich Low_complexity Low_complexity 1 59 0 1 649 334 345 115 35 chr15 8508629 8508917 -94986057 + LTR16E2 LTR ERVL 258 568 0 1 649 190 316 72 21 chr15 8508986 8509083 -94985891 + MIR SINE MIR 95 196 -66 2 649 234 80 38 51 chr15 8509667 8509746 -94985228 + (TTTG)n Simple_repeat Simple_repeat 3 80 0 2 649 1198 54 7 0 chr15 8509746 8509893 -94985081 - B1_Mus1 SINE Alu 0 148 1 2 649 550 343 50 39 chr15 8511109 8511391 -94983583 - B4A SINE B4 0 292 8 2 649 185 0 0 39 chr15 8511867 8511893 -94983081 + (CCCCCA)n Simple_repeat Simple_repeat 2 26 0 2 649 216 200 0 0 chr15 8511964 8512009 -94982965 + (ATG)n Simple_repeat Simple_repeat 2 46 0 2 649 531 286 8 0 chr15 8512201 8512334 -94982640 + B3A SINE B2 11 144 -54 2 649 468 0 0 0 chr15 8512336 8512388 -94982586 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 649 308 167 30 0 chr15 8513734 8513800 -94981174 + T-rich Low_complexity Low_complexity 3 70 0 2 649 2814 30 63 0 chr15 8514965 8515298 -94979676 + IAPEY2_LTR LTR ERVK 1 354 -3 2 649 185 233 15 91 chr15 8515840 8515906 -94979068 + MIR SINE MIR 201 261 -1 3 649 202 306 0 16 chr15 8516263 8516326 -94978648 - L2b LINE L2 -15 3360 3299 3 649 1217 35 14 0 chr15 8516686 8516831 -94978143 + B1_Mus2 SINE Alu 1 147 0 3 649 430 140 0 23 chr15 8517235 8517323 -94977651 + (TA)n Simple_repeat Simple_repeat 1 86 0 3 649 875 211 8 16 chr15 8517389 8517635 -94977339 + RMER17C LTR ERVK 1 244 -166 3 649 675 217 88 26 chr15 8517609 8517917 -94977057 + RMER17C LTR ERVK 84 410 0 3 649 414 0 0 0 chr15 8518070 8518116 -94976858 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 649 365 299 60 42 chr15 8518222 8518438 -94976536 - ID_B1 SINE B4 0 224 5 3 650 203 321 55 9 chr15 8519718 8519828 -94975146 + MIRm SINE MIR 5 119 -157 3 650 352 265 245 0 chr15 8519949 8520100 -94974874 + ID_B1 SINE B4 1 188 -36 3 650 1061 22 7 0 chr15 8520141 8520279 -94974695 - B1_Mm SINE Alu 0 147 9 3 650 600 231 0 0 chr15 8520360 8520516 -94974458 + (TA)n Simple_repeat Simple_repeat 2 157 0 4 650 244 227 39 39 chr15 8521400 8521478 -94973496 - MLT1E2 LTR MaLR -37 468 391 4 650 468 279 19 109 chr15 8521519 8521802 -94973172 - MLT1E2 LTR MaLR -225 280 9 4 650 342 284 10 10 chr15 8521925 8522021 -94972953 + MIR SINE MIR 77 172 -90 4 650 352 301 0 0 chr15 8523081 8523174 -94971800 + MLT1B LTR MaLR 1 93 -297 4 650 18369 83 29 2 chr15 8523174 8526084 -94968890 + L1_Mus1 LINE L1 3277 6242 -325 4 650 858 35 0 0 chr15 8526086 8526200 -94968774 + B1_Mus1 SINE Alu 35 148 0 4 650 271 42 20 40 chr15 8526204 8526254 -94968720 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 4 650 435 171 0 0 chr15 8526242 8526263 -94968711 + polypurine Low_complexity Low_complexity 2 22 0 4 650 2687 54 3 0 chr15 8526263 8526661 -94968313 + L1_Mus1 LINE L1 6235 6567 0 4 650 257 228 151 11 chr15 8526661 8526754 -94968220 + MLT1B LTR MaLR 81 186 -204 4 650 324 0 0 0 chr15 8526755 8526791 -94968183 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 650 339 227 0 13 chr15 8526827 8526903 -94968071 + MLT1B LTR MaLR 314 388 -2 4 650 312 70 0 0 chr15 8527994 8528037 -94966937 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 650 324 0 0 0 chr15 8528113 8528149 -94966825 + (TCTA)n Simple_repeat Simple_repeat 1 36 0 5 650 420 224 101 18 chr15 8528150 8528259 -94966715 - B1F2 SINE Alu -8 141 24 5 650 22 0 0 0 chr15 8528573 8528595 -94966379 + AT_rich Low_complexity Low_complexity 1 22 0 5 650 219 309 69 54 chr15 8529004 8529134 -94965840 - L2b LINE L2 -222 3153 3022 5 650 421 326 55 28 chr15 8530061 8530283 -94964691 + MIR SINE MIR 1 229 -39 5 650 212 260 0 0 chr15 8530310 8530360 -94964614 + MIR SINE MIR 202 251 -11 5 650 885 269 57 25 chr15 8530427 8530454 -94964520 - B4A SINE B4 0 292 272 5 650 423 0 0 0 chr15 8530454 8530501 -94964473 + (TATG)n Simple_repeat Simple_repeat 4 50 0 5 650 885 269 57 25 chr15 8530501 8530755 -94964219 - B4A SINE B4 -21 271 2 5 650 863 122 0 7 chr15 8530755 8530833 -94964141 + (TTC)n Simple_repeat Simple_repeat 1 78 0 5 650 1620 0 0 0 chr15 8530833 8531013 -94963961 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 5 650 863 122 0 7 chr15 8531013 8531075 -94963899 + (TTC)n Simple_repeat Simple_repeat 2 63 0 5 650 420 20 0 0 chr15 8532139 8532188 -94962786 + (GA)n Simple_repeat Simple_repeat 2 50 0 6 650 548 212 0 25 chr15 8533317 8533438 -94961536 + B1F2 SINE Alu 32 149 0 6 650 239 54 0 26 chr15 8533450 8533488 -94961486 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 6 650 543 222 26 0 chr15 8534839 8534956 -94960018 - PB1D9 SINE Alu 0 120 1 6 650 21 0 0 0 chr15 8534963 8534984 -94959990 + AT_rich Low_complexity Low_complexity 1 21 0 6 650 226 295 34 45 chr15 8535102 8535246 -94959728 + MIRm SINE MIR 19 155 -107 6 650 300 300 16 70 chr15 8535725 8535854 -94959120 + MIR SINE MIR 90 218 -50 6 650 1357 71 33 0 chr15 8535891 8536073 -94958901 + B2_Mm2 SINE B2 2 189 -6 6 650 195 42 0 0 chr15 8536528 8536552 -94958422 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 650 875 59 0 8 chr15 8536557 8536676 -94958298 + (GGAA)n Simple_repeat Simple_repeat 3 120 0 6 650 26 0 0 0 chr15 8537672 8537698 -94957276 + AT_rich Low_complexity Low_complexity 1 26 0 7 650 916 268 89 41 chr15 8537917 8538286 -94956688 - MT2A LTR ERVL 0 533 147 7 650 267 31 0 0 chr15 8538451 8538483 -94956491 + (T)n Simple_repeat Simple_repeat 1 32 0 7 650 1207 62 0 0 chr15 8538483 8538629 -94956345 - B1_Mus2 SINE Alu 0 147 2 7 650 455 119 327 9 chr15 8538631 8538741 -94956233 - B2_Mm2 SINE B2 -2 193 49 7 650 212 171 24 0 chr15 8538707 8538748 -94956226 - B4 SINE B4 -210 82 41 7 650 1351 63 23 6 chr15 8538771 8538947 -94956027 - B2_Mm2 SINE B2 -14 181 3 7 650 1231 48 0 0 chr15 8539256 8539402 -94955572 + B1_Mus2 SINE Alu 2 147 0 7 650 22 99 0 0 chr15 8539476 8539547 -94955427 + AT_rich Low_complexity Low_complexity 1 71 0 7 650 747 186 43 0 chr15 8539565 8539705 -94955269 - B1_Mur3 SINE Alu -3 146 1 7 650 189 107 0 0 chr15 8541102 8541130 -94953844 + (TA)n Simple_repeat Simple_repeat 2 29 0 8 650 193 0 29 59 chr15 8541305 8541339 -94953635 + (TTATA)n Simple_repeat Simple_repeat 2 34 0 8 650 3112 66 2 5 chr15 8541343 8541740 -94953234 - MTA_Mm LTR MaLR 0 396 1 8 650 258 103 110 0 chr15 8541746 8541882 -94953092 + (TA)n Simple_repeat Simple_repeat 2 152 0 8 650 611 187 0 49 chr15 8541918 8542081 -94952893 + Lx9 LINE L1 7487 7641 -3 8 650 801 272 32 58 chr15 8544542 8544819 -94950155 + MTEa LTR MaLR 79 348 -31 8 650 390 330 144 4 chr15 8546582 8546817 -94948157 - MIR SINE MIR 0 262 9 8 650 1201 161 32 5 chr15 8548866 8549085 -94945889 + URR1B DNA MER1_type 1 225 0 8 650 24 0 0 0 chr15 8549223 8549247 -94945727 + AT_rich Low_complexity Low_complexity 1 24 0 8 650 207 200 0 0 chr15 8550198 8550238 -94944736 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 650 616 243 69 37 chr15 8550262 8550450 -94944524 - B4A SINE B4 -8 284 91 9 650 834 168 57 23 chr15 8550494 8550671 -94944303 - MTC LTR MaLR 0 421 239 9 650 621 217 8 0 chr15 8550876 8551005 -94943969 - MTC LTR MaLR -157 264 135 9 650 287 185 46 0 chr15 8551174 8551239 -94943735 - MTE2b LTR MaLR -18 361 294 9 650 333 0 0 0 chr15 8552488 8552525 -94942449 + (A)n Simple_repeat Simple_repeat 1 37 0 9 650 723 153 188 71 chr15 8552550 8552747 -94942227 + URR1B DNA MER1_type 6 225 0 9 650 896 283 79 62 chr15 8553043 8553397 -94941577 - MTD LTR MaLR -38 381 22 9 650 396 0 0 0 chr15 8553461 8553505 -94941469 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 9 650 1533 56 0 30 chr15 8553512 8553713 -94941261 + B2_Mm2 SINE B2 1 195 0 9 650 207 0 0 0 chr15 8553752 8553775 -94941199 + (TG)n Simple_repeat Simple_repeat 2 24 0 9 650 537 325 33 46 chr15 8553801 8554064 -94940910 - B4A SINE B4 -20 272 2 9 650 3338 41 5 2 chr15 8554263 8554658 -94940316 - MTA_Mm LTR MaLR 0 396 1 1 650 1345 84 11 11 chr15 8554775 8554956 -94940018 - B2_Mm2 SINE B2 -14 181 1 1 650 271 231 184 9 chr15 8555227 8555336 -94939638 - MIR SINE MIR -43 219 92 1 650 240 35 0 0 chr15 8555440 8555469 -94939505 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 650 234 0 0 0 chr15 8555469 8555494 -94939480 + (GA)n Simple_repeat Simple_repeat 1 26 0 1 650 375 113 0 0 chr15 8555669 8555731 -94939243 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 650 324 0 0 0 chr15 8556209 8556245 -94938729 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 650 252 0 0 0 chr15 8557511 8557539 -94937435 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 650 908 65 0 41 chr15 8558225 8558370 -94936604 - L1Md_F2 LINE L1 -1 6581 6443 1 650 1954 48 0 0 chr15 8558370 8558599 -94936375 + L1Md_F2 LINE L1 6096 6324 -258 1 650 320 339 43 85 chr15 8560094 8560516 -94934458 + ERVL-int LTR ERVL 2109 2512 -3245 1 650 2692 68 5 34 chr15 8560517 8560577 -94934397 - MTB LTR MaLR 0 400 346 1 650 2729 48 33 0 chr15 8560577 8560912 -94934062 + ORR1A1 LTR MaLR 1 346 0 1 650 2692 68 5 34 chr15 8560912 8561263 -94933711 - MTB LTR MaLR -55 345 1 1 650 280 324 87 47 chr15 8561269 8561418 -94933556 + ERVL-int LTR ERVL 2426 2580 -3087 1 650 407 277 11 0 chr15 8561515 8561609 -94933365 - RSINE1 SINE B4 -68 97 3 1 650 1044 270 138 100 chr15 8561663 8562089 -94932885 + RCHARR1 DNA MER1_type 1 495 -479 1 650 1033 60 90 0 chr15 8562089 8562223 -94932751 + B1_Mm SINE Alu 2 147 0 1 650 1044 270 138 100 chr15 8562223 8562384 -94932590 + RCHARR1 DNA MER1_type 496 610 -364 1 650 888 164 0 20 chr15 8562861 8563010 -94931964 - B1_Mus1 SINE Alu -1 147 2 1 650 330 87 0 0 chr15 8563075 8563121 -94931853 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 650 860 148 102 60 chr15 8563164 8563347 -94931627 + ORR1C2 LTR MaLR 1 176 -208 1 650 219 36 0 0 chr15 8563347 8563375 -94931599 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 650 860 148 102 60 chr15 8563375 8563406 -94931568 + ORR1C2 LTR MaLR 177 223 -161 1 650 411 228 30 0 chr15 8564116 8564217 -94930757 - PB1D10 SINE Alu -13 104 1 1 650 296 338 101 51 chr15 8564218 8564573 -94930401 + L4 LINE RTE 773 1145 -884 1 650 1446 269 63 32 chr15 8566961 8567467 -94927507 - RMER5 LTR ERV1 0 534 13 1 650 784 291 24 22 chr15 8567557 8567857 -94927117 + MLT1D LTR MaLR 164 496 -9 1 650 560 292 57 16 chr15 8568193 8568437 -94926537 - B4 SINE B4 -4 288 35 1 650 291 54 0 0 chr15 8568737 8568774 -94926200 + (ATG)n Simple_repeat Simple_repeat 1 37 0 1 650 716 128 196 0 chr15 8571228 8571361 -94923613 + B2_Mm2 SINE B2 1 159 -36 1 650 198 0 0 0 chr15 8571363 8571385 -94923589 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 1 650 1563 58 5 0 chr15 8571590 8571781 -94923193 + B2_Mm1a SINE B2 2 193 0 1 650 234 0 0 0 chr15 8572010 8572036 -94922938 + (T)n Simple_repeat Simple_repeat 1 26 0 1 650 484 115 65 0 chr15 8572517 8572656 -94922318 + (TCTA)n Simple_repeat Simple_repeat 2 149 0 1 650 601 103 41 29 chr15 8572744 8572914 -94922060 + (TCTA)n Simple_repeat Simple_repeat 3 174 0 1 650 195 26 75 25 chr15 8575305 8575345 -94919629 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 1 650 632 236 8 0 chr15 8575890 8576017 -94918957 + RSINE1 SINE B4 3 130 -35 1 650 659 75 11 0 chr15 8576029 8576123 -94918851 + (TAGA)n Simple_repeat Simple_repeat 4 98 0 1 650 282 308 128 16 chr15 8576934 8577122 -94917852 + LTR81A LTR ERV1? 80 281 -1112 1 650 271 298 184 12 chr15 8577523 8577686 -94917288 - MLT1A LTR MaLR -1 373 183 1 650 353 259 41 5 chr15 8578225 8578388 -94916586 - MLT1A LTR MaLR -2 372 192 1 650 74 0 0 12 chr15 8578662 8578698 -94916276 + AT_rich Low_complexity Low_complexity 1 36 0 1 650 1168 95 0 0 chr15 8578698 8578845 -94916129 - B1_Mus1 SINE Alu 0 148 2 1 650 74 0 0 12 chr15 8578845 8578893 -94916081 + AT_rich Low_complexity Low_complexity 1 48 0 1 650 210 245 287 19 chr15 8579090 8579198 -94915776 - MER5A DNA MER1_type -5 184 48 1 650 207 209 23 0 chr15 8580307 8580350 -94914624 + CT-rich Low_complexity Low_complexity 1 44 0 1 650 265 369 29 19 chr15 8580353 8580458 -94914516 - PB1D10 SINE Alu -10 107 2 1 650 202 163 23 23 chr15 8581156 8581200 -94913774 + GA-rich Low_complexity Low_complexity 1 44 0 1 650 865 191 96 15 chr15 8581880 8582077 -94912897 - URR1B DNA MER1_type -2 223 11 1 650 243 0 0 0 chr15 8582831 8582858 -94912116 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 650 231 36 0 0 chr15 8582858 8582885 -94912089 + (GA)n Simple_repeat Simple_repeat 1 28 0 1 650 219 111 0 43 chr15 8582894 8582941 -94912033 + A-rich Low_complexity Low_complexity 3 47 0 1 650 205 182 0 0 chr15 8584860 8584904 -94910070 + A-rich Low_complexity Low_complexity 1 44 0 1 650 1543 58 16 0 chr15 8586444 8586634 -94908340 + B2_Mm2 SINE B2 1 193 -2 1 650 693 270 99 67 chr15 8586825 8587107 -94907867 - B4A SINE B4 0 292 2 1 650 544 298 101 36 chr15 8587163 8587255 -94907719 + Charlie1b DNA MER1_type 2 108 -415 1 650 1146 112 89 0 chr15 8587255 8587434 -94907540 - B2_Mm2 SINE B2 0 195 1 1 650 544 298 101 36 chr15 8587434 8587678 -94907296 + Charlie1b DNA MER1_type 109 360 -163 1 650 763 164 0 8 chr15 8587706 8587835 -94907139 + B1_Mur3 SINE Alu 2 129 -20 1 650 599 0 14 0 chr15 8587835 8587906 -94907068 + (CAAAA)n Simple_repeat Simple_repeat 4 75 0 1 650 788 209 81 76 chr15 8587943 8588166 -94906808 - ID_B1 SINE B4 0 224 1 1 650 186 103 0 0 chr15 8589301 8589330 -94905644 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1 650 216 291 59 105 chr15 8589352 8589500 -94905474 - MIRb SINE MIR -5 257 121 1 650 281 286 29 0 chr15 8589556 8589626 -94905348 + ID4 SINE ID 7 78 -5 1 650 306 0 0 0 chr15 8589802 8589836 -94905138 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 650 259 299 157 9 chr15 8590031 8590139 -94904835 + MLT1J LTR MaLR 74 197 -315 1 650 384 182 9 35 chr15 8590858 8590972 -94904002 + GA-rich Low_complexity Low_complexity 4 114 0 1 650 207 0 0 0 chr15 8591566 8591589 -94903385 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1 650 1205 36 0 0 chr15 8591589 8591727 -94903247 - B1_Mm SINE Alu -9 138 1 1 650 282 148 0 0 chr15 8593210 8593264 -94901710 + (A)n Simple_repeat Simple_repeat 1 54 0 1 650 234 62 0 0 chr15 8593609 8593641 -94901333 + (CATGC)n Simple_repeat Simple_repeat 1 32 0 1 650 1062 168 103 5 chr15 8593678 8593881 -94901093 + URR1B DNA MER1_type 1 223 -2 1 650 472 229 70 6 chr15 8593891 8594062 -94900912 - MER113 DNA MER1_type -31 490 309 1 650 444 19 0 0 chr15 8595222 8595275 -94899699 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 650 342 0 0 0 chr15 8596124 8596162 -94898812 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 650 423 0 0 0 chr15 8597569 8597616 -94897358 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 1 650 45 62 0 0 chr15 8597624 8597704 -94897270 + AT_rich Low_complexity Low_complexity 1 80 0 1 650 645 264 7 0 chr15 8597732 8597876 -94897098 - RSINE1 SINE B4 -18 147 3 1 650 320 281 30 40 chr15 8597876 8597976 -94896998 - B1F SINE Alu -1 148 50 1 650 203 0 0 36 chr15 8597990 8598018 -94896956 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 650 911 76 8 0 chr15 8598018 8598150 -94896824 - B1_Mus1 SINE Alu -10 138 6 1 650 519 45 0 0 chr15 8598184 8598250 -94896724 + (TCCC)n Simple_repeat Simple_repeat 4 69 0 1 650 525 16 0 0 chr15 8598261 8598323 -94896651 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 650 182 301 182 19 chr15 8598645 8598804 -94896170 + MIRb SINE MIR 9 193 -75 1 650 363 78 0 0 chr15 8599288 8599339 -94895635 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 650 475 307 40 0 chr15 8599346 8599496 -94895478 - B3A SINE B2 -42 156 1 1 650 275 232 55 99 chr15 8600000 8600091 -94894883 - PB1D10 SINE Alu -8 109 23 1 650 415 248 10 10 chr15 8601918 8602020 -94892954 - B3A SINE B2 -82 116 15 1 650 439 243 129 0 chr15 8602082 8602246 -94892728 - B3 SINE B2 -6 192 1 1 650 210 376 35 0 chr15 8604291 8604409 -94890565 - MIRc SINE MIR -105 163 45 1 650 21 0 0 0 chr15 8605080 8605101 -94889873 + AT_rich Low_complexity Low_complexity 1 21 0 1 650 862 57 0 47 chr15 8606159 8606287 -94888687 - MTB_Mm LTR MaLR 0 407 286 1 650 2059 100 71 3 chr15 8606306 8606656 -94888318 - MTB_Mm-int LTR MaLR -724 374 1 1 650 1576 177 105 39 chr15 8606656 8607038 -94887936 - MTB_Mm LTR MaLR 0 407 1 1 650 218 222 0 0 chr15 8607611 8607656 -94887318 + (TATG)n Simple_repeat Simple_repeat 3 47 0 1 650 497 283 25 66 chr15 8607656 8607853 -94887121 - B4A SINE B4 0 292 104 1 650 25 51 0 0 chr15 8607867 8607906 -94887068 + AT_rich Low_complexity Low_complexity 1 39 0 1 650 836 264 51 21 chr15 8607943 8608179 -94886795 + Lx7 LINE L1 6654 6896 -800 1 650 338 75 10 0 chr15 8608183 8608244 -94886730 + B1_Mm SINE Alu 57 147 0 1 650 207 0 0 0 chr15 8608272 8608295 -94886679 + (CCCCCT)n Simple_repeat Simple_repeat 6 28 0 1 650 439 262 60 40 chr15 8608295 8608438 -94886536 + Lx7 LINE L1 6959 7105 -591 1 650 645 80 0 0 chr15 8608620 8608708 -94886266 + (TCTCCC)n Simple_repeat Simple_repeat 4 91 0 1 650 465 248 68 8 chr15 8608708 8608826 -94886148 - B1F1 SINE Alu -12 137 13 1 650 989 134 219 16 chr15 8610878 8611188 -94883786 + RMER10A LTR ERVL 53 425 -17 1 650 515 144 103 0 chr15 8611598 8611695 -94883279 - RMER10A LTR ERVL -335 107 1 1 650 311 125 36 0 chr15 8612495 8612551 -94882423 - B1F1 SINE Alu -23 126 69 1 650 452 316 166 19 chr15 8613678 8613985 -94880989 - L3 LINE CR1 -460 4029 3678 1 650 514 278 7 7 chr15 8614259 8614404 -94880570 - B1F SINE Alu -1 148 4 2 650 208 24 146 0 chr15 8614920 8614961 -94880013 + T-rich Low_complexity Low_complexity 2 48 0 2 650 221 204 0 22 chr15 8615421 8615466 -94879508 + T-rich Low_complexity Low_complexity 2 45 0 2 650 180 200 0 0 chr15 8618523 8618563 -94876411 + GA-rich Low_complexity Low_complexity 1 40 0 2 650 194 119 0 45 chr15 8618612 8618656 -94876318 + CT-rich Low_complexity Low_complexity 2 43 0 2 650 509 133 10 0 chr15 8619417 8619515 -94875459 + (TTC)n Simple_repeat Simple_repeat 1 99 0 2 650 902 162 6 0 chr15 8619518 8619530 -94875444 + polypyrimidine Low_complexity Low_complexity 169 180 0 2 650 1188 86 11 3 chr15 8619530 8619881 -94875093 + (TTC)n Simple_repeat Simple_repeat 1 354 0 2 650 902 162 6 0 chr15 8619881 8620046 -94874928 + CT-rich Low_complexity Low_complexity 3 168 0 2 650 447 19 0 0 chr15 8620139 8620191 -94874783 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 650 698 223 29 7 chr15 8620208 8620348 -94874626 + B1_Mur1 SINE Alu 5 147 -2 2 650 574 192 20 49 chr15 8620826 8620961 -94874013 - ID_B1 SINE B4 -154 138 3 2 650 293 127 0 35 chr15 8621452 8621509 -94873465 + C-rich Low_complexity Low_complexity 5 59 0 2 650 350 257 38 0 chr15 8621510 8621615 -94873359 - PB1D10 SINE Alu -8 109 1 2 650 216 0 0 0 chr15 8622049 8622073 -94872901 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 650 198 0 0 0 chr15 8622073 8622095 -94872879 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 650 279 0 0 0 chr15 8622095 8622125 -94872849 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 650 408 20 0 0 chr15 8622872 8622921 -94872053 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 650 325 314 86 0 chr15 8623331 8623436 -94871538 + MER2 DNA MER2_type 2 115 -230 2 650 766 278 0 0 chr15 8623915 8624084 -94870890 + B3 SINE B2 1 169 -47 2 650 2365 185 85 28 chr15 8624084 8624661 -94870313 + Lx9 LINE L1 7028 7637 -7 2 650 8288 47 1 0 chr15 8624672 8625664 -94869310 + L1Md_F2 LINE L1 5589 6581 -1 2 650 214 310 0 0 chr15 8625709 8625767 -94869207 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 650 435 141 9 217 chr15 8625850 8626076 -94868898 + RMER17C LTR ERVK 97 275 -135 2 650 425 111 0 27 chr15 8626077 8626151 -94868823 + (GAAAA)n Simple_repeat Simple_repeat 2 73 0 2 650 675 224 21 14 chr15 8626843 8626988 -94867986 + B1_Mur1 SINE Alu 2 147 -2 2 650 332 242 68 68 chr15 8627007 8627140 -94867834 + Lx8 LINE L1 5773 5905 -1568 2 650 775 179 12 3 chr15 8627223 8627373 -94867601 - B2_Mm2 SINE B2 -56 160 2 2 650 1105 93 81 6 chr15 8627384 8627557 -94867417 - B2_Mm2 SINE B2 -9 186 1 2 650 264 120 0 0 chr15 8628040 8628090 -94866884 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 650 685 212 25 13 chr15 8628092 8628250 -94866724 - Lx9 LINE L1 -170 7474 7315 2 650 521 93 0 0 chr15 8628373 8628448 -94866526 + B1_Mus2 SINE Alu 1 75 -72 2 650 411 290 60 43 chr15 8628462 8628792 -94866182 + L1MB8 LINE L1 5701 6037 -141 2 650 1182 112 0 0 chr15 8628793 8628971 -94866003 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 2 650 243 0 0 0 chr15 8628975 8629002 -94865972 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 2 650 648 0 0 0 chr15 8629000 8629072 -94865902 + (TTTC)n Simple_repeat Simple_repeat 3 74 0 2 650 1106 115 6 0 chr15 8629072 8629246 -94865728 + (TTCC)n Simple_repeat Simple_repeat 2 176 0 2 650 283 54 0 0 chr15 8629257 8629294 -94865680 + (T)n Simple_repeat Simple_repeat 1 37 0 2 650 1192 62 0 0 chr15 8629294 8629440 -94865534 - B1_Mus2 SINE Alu 0 147 2 2 650 442 240 10 0 chr15 8629441 8629537 -94865437 + L1MB7 LINE L1 6030 6126 -58 2 650 705 203 40 59 chr15 8630307 8630459 -94864515 - B1_Mur4 SINE Alu 0 150 2 2 650 201 271 14 54 chr15 8631552 8631626 -94863348 - MER5B DNA MER1_type -2 176 106 2 650 226 284 0 43 chr15 8633034 8633104 -94861870 + L3 LINE CR1 4347 4413 -76 2 650 333 155 0 0 chr15 8633615 8633673 -94861301 + A-rich Low_complexity Low_complexity 1 58 0 2 650 297 0 0 0 chr15 8633941 8633974 -94861000 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 2 650 180 0 0 0 chr15 8634959 8634979 -94859995 + (T)n Simple_repeat Simple_repeat 1 20 0 2 650 1289 20 0 0 chr15 8634979 8635125 -94859849 - B1_Mus1 SINE Alu 0 148 3 2 650 807 88 0 0 chr15 8638144 8638257 -94856717 + (GAAA)n Simple_repeat Simple_repeat 3 115 0 2 650 350 348 98 18 chr15 8639757 8639982 -94854992 - MIR SINE MIR -5 257 15 2 650 2920 53 2 113 chr15 8640171 8640373 -94854601 + MTB LTR MaLR 1 196 -204 2 650 1289 27 0 0 chr15 8640373 8640520 -94854454 + B1_Mm SINE Alu 1 147 0 2 650 2920 53 2 113 chr15 8640520 8640767 -94854207 + MTB LTR MaLR 197 400 0 2 650 189 74 0 0 chr15 8641065 8641092 -94853882 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 650 595 211 111 62 chr15 8641100 8641343 -94853631 - Lx8 LINE L1 -1581 5892 5638 2 650 249 234 109 0 chr15 8641393 8641457 -94853517 - ID4_ SINE ID -11 72 2 2 650 325 302 192 17 chr15 8641678 8641850 -94853124 - MIRb SINE MIR -15 253 52 2 650 844 98 105 0 chr15 8642098 8642231 -94852743 - B1_Mus1 SINE Alu 0 148 2 2 650 2302 221 42 81 chr15 8642303 8643120 -94851854 + Lx5 LINE L1 5873 6629 -429 2 650 862 157 0 0 chr15 8643118 8643252 -94851722 - Lx6 LINE L1 -339 7121 6988 2 650 752 103 0 8 chr15 8643772 8643889 -94851085 + (TCTCC)n Simple_repeat Simple_repeat 5 120 0 2 650 537 200 14 14 chr15 8643857 8644004 -94850970 + CT-rich Low_complexity Low_complexity 1 147 0 2 650 689 86 23 38 chr15 8644033 8644166 -94850808 - L1_Mus3 LINE L1 -1 6637 6507 2 650 213 159 0 0 chr15 8644187 8644231 -94850743 + A-rich Low_complexity Low_complexity 1 44 0 2 650 318 98 118 0 chr15 8645365 8645518 -94849456 + (TA)n Simple_repeat Simple_repeat 1 171 0 2 650 536 62 0 12 chr15 8645544 8645626 -94849348 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 2 650 1273 80 40 6 chr15 8645629 8645805 -94849169 + B2_Mm2 SINE B2 1 182 -13 2 650 582 15 0 0 chr15 8645862 8645929 -94849045 + (GAGAA)n Simple_repeat Simple_repeat 4 70 0 2 650 282 390 28 0 chr15 8646484 8646625 -94848349 - L2a LINE L2 -2 3424 3280 2 650 1571 37 37 0 chr15 8647267 8647454 -94847520 - B2_Mm2 SINE B2 -1 194 1 2 650 237 293 40 0 chr15 8647607 8647682 -94847292 - B3 SINE B2 -9 207 130 2 650 610 197 7 29 chr15 8647709 8647845 -94847129 - B3 SINE B2 -82 134 2 2 650 1210 28 0 0 chr15 8649268 8649409 -94845565 - B1_Mus2 SINE Alu -5 142 2 2 650 1246 159 71 42 chr15 8649525 8649731 -94845243 + RMER17C LTR ERVK 1 212 -198 2 650 1146 55 0 0 chr15 8649731 8649877 -94845097 + (TCTCCC)n Simple_repeat Simple_repeat 6 151 0 2 650 1246 111 256 39 chr15 8649877 8650033 -94844941 + RMER17C LTR ERVK 213 402 -8 2 650 1193 89 17 0 chr15 8650309 8650488 -94844486 + B2_Mm1t SINE B2 10 191 -2 2 650 698 109 0 9 chr15 8650521 8650632 -94844342 + (GAA)n Simple_repeat Simple_repeat 3 112 0 2 651 221 250 19 0 chr15 8653309 8653361 -94841613 + GA-rich Low_complexity Low_complexity 4 56 0 2 651 246 62 0 0 chr15 8655692 8655724 -94839250 + (TTCTCC)n Simple_repeat Simple_repeat 5 36 0 2 651 1151 60 156 0 chr15 8655727 8655894 -94839080 - B2_Mm2 SINE B2 0 195 3 2 651 747 0 0 0 chr15 8655896 8655979 -94838995 + (TTC)n Simple_repeat Simple_repeat 3 85 0 2 651 989 103 7 0 chr15 8658014 8658160 -94836814 - B1_Mus1 SINE Alu 0 148 2 2 651 191 36 36 0 chr15 8658379 8658407 -94836567 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 651 611 103 0 10 chr15 8661261 8661359 -94833615 + (TC)n Simple_repeat Simple_repeat 2 98 0 2 651 324 0 0 0 chr15 8661366 8661402 -94833572 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 651 888 184 0 26 chr15 8661427 8661578 -94833396 - B1_Mus2 SINE Alu 0 147 1 2 651 1356 62 0 0 chr15 8663186 8663365 -94831609 + (CA)n Simple_repeat Simple_repeat 1 179 0 2 651 411 21 0 0 chr15 8663723 8663771 -94831203 + (CATA)n Simple_repeat Simple_repeat 2 49 0 2 651 269 240 52 8 chr15 8664166 8664256 -94830718 + B1F SINE Alu 42 139 -10 2 651 2389 98 3 0 chr15 8664344 8664670 -94830304 + ORR1A2 LTR MaLR 1 327 0 2 651 1326 82 55 0 chr15 8665206 8665389 -94829585 + B2_Mm2 SINE B2 3 195 0 2 651 528 87 0 47 chr15 8665503 8665588 -94829386 - B1_Mus2 SINE Alu -1 146 66 2 651 637 206 29 0 chr15 8665651 8665787 -94829187 - B3A SINE B2 -35 163 24 2 651 2016 136 17 22 chr15 8665793 8666154 -94828820 + ORR1B2 LTR MaLR 1 359 -8 2 651 182 327 0 0 chr15 8666223 8666275 -94828699 - MIRc SINE MIR -129 139 88 2 651 546 16 0 0 chr15 8666759 8666822 -94828152 + (CCCCCA)n Simple_repeat Simple_repeat 3 65 0 2 651 1246 34 0 0 chr15 8667670 8667816 -94827158 + B1_Mus2 SINE Alu 2 147 0 2 651 234 0 0 0 chr15 8667816 8667842 -94827132 + (A)n Simple_repeat Simple_repeat 1 26 0 2 651 25 0 0 0 chr15 8669034 8669059 -94825915 + AT_rich Low_complexity Low_complexity 1 25 0 2 651 224 307 90 25 chr15 8669330 8669539 -94825435 - MIRb SINE MIR -12 256 30 2 651 1015 73 59 0 chr15 8669841 8669977 -94824997 + B1_Mus1 SINE Alu 1 144 -4 2 651 1141 83 0 12 chr15 8670054 8670225 -94824749 + B2_Mm2 SINE B2 2 170 -25 2 651 324 0 0 0 chr15 8670295 8670331 -94824643 + (TCTA)n Simple_repeat Simple_repeat 4 39 0 2 651 1197 115 11 6 chr15 8670331 8670514 -94824460 - B2_Mm1t SINE B2 -8 185 2 3 651 519 56 0 0 chr15 8670931 8671002 -94823972 + (GA)n Simple_repeat Simple_repeat 1 71 0 3 651 498 46 0 0 chr15 8671569 8671634 -94823340 + (TTC)n Simple_repeat Simple_repeat 3 67 0 3 651 230 0 0 32 chr15 8671634 8671665 -94823309 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 3 651 1184 47 0 39 chr15 8671669 8671823 -94823151 - B1_Mur3 SINE Alu 0 149 2 3 651 437 258 0 9 chr15 8672034 8672163 -94822811 + B1F2 SINE Alu 25 149 0 3 651 406 314 118 8 chr15 8673585 8673848 -94821126 + Charlie4 DNA MER1_type 14 305 -1656 3 651 705 250 25 45 chr15 8673866 8674067 -94820907 + B3A SINE B2 2 198 0 3 651 660 190 94 41 chr15 8674267 8674437 -94820537 - RLTR41 LTR ERV1 0 446 268 3 651 3107 28 2 116 chr15 8674447 8674885 -94820089 - RLTR10 LTR ERVK -2 388 1 3 651 9004 16 0 2 chr15 8674887 8675884 -94819090 - RLTR10-int LTR ERVK -3 1984 990 3 651 373 271 31 8 chr15 8675966 8676096 -94818878 - RLTR10-int LTR ERVK -5987 1594 1462 3 651 7850 33 33 2 chr15 8676160 8677090 -94817884 - RLTR10-int LTR ERVK -989 998 40 3 651 3056 34 2 116 chr15 8677101 8677539 -94817435 - RLTR10 LTR ERVK -2 388 1 3 651 795 112 59 191 chr15 8677542 8677762 -94817212 - RLTR41 LTR ERV1 -194 252 62 3 651 475 189 44 0 chr15 8678026 8678116 -94816858 - B1_Mur4 SINE Alu -56 94 1 3 651 933 62 141 0 chr15 8678390 8678518 -94816456 - B1_Mus1 SINE Alu -1 147 2 3 651 21 36 0 0 chr15 8678740 8678768 -94816206 + AT_rich Low_complexity Low_complexity 1 28 0 3 651 1930 134 114 12 chr15 8678993 8679326 -94815648 + ORR1B2 LTR MaLR 1 367 0 3 651 1327 68 51 0 chr15 8679682 8679859 -94815115 - B2_Mm2 SINE B2 -8 187 2 3 651 255 125 0 0 chr15 8679980 8680020 -94814954 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 651 718 289 156 7 chr15 8680031 8680306 -94814668 - Lx8 LINE L1 -146 7327 7012 3 651 1551 176 63 3 chr15 8680315 8680617 -94814357 + ORR1D1 LTR MaLR 55 374 0 3 651 1888 231 52 42 chr15 8680617 8681119 -94813855 - Lx8 LINE L1 -486 6987 6481 3 651 1469 22 77 6 chr15 8681411 8681592 -94813382 - B2_Mm2 SINE B2 0 195 2 3 651 1405 64 26 21 chr15 8681602 8681633 -94813341 - B2_Mm1t SINE B2 0 193 161 3 651 402 21 0 0 chr15 8681633 8681680 -94813294 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 3 651 1405 64 26 21 chr15 8681680 8681839 -94813135 - B2_Mm1t SINE B2 -33 160 2 3 651 292 287 153 20 chr15 8681911 8682160 -94812814 - L1M5 LINE L1 -1195 4951 4670 3 651 329 323 126 86 chr15 8682195 8682473 -94812501 + B4A SINE B4 2 290 -2 3 651 360 64 0 0 chr15 8682762 8682809 -94812165 + (TTA)n Simple_repeat Simple_repeat 2 48 0 3 651 1061 44 0 0 chr15 8682811 8682947 -94812027 - B1_Mm SINE Alu -6 141 6 3 651 200 122 0 24 chr15 8684314 8684356 -94810618 + (CAAAA)n Simple_repeat Simple_repeat 3 43 0 3 651 311 270 153 0 chr15 8684535 8684686 -94810288 + MIRb SINE MIR 61 246 -16 3 651 235 345 128 60 chr15 8684811 8685045 -94809929 - MLT1J LTR MaLR -187 325 76 3 651 2567 66 0 62 chr15 8685123 8685487 -94809487 + MTB_Mm LTR MaLR 1 350 -57 3 651 3315 46 5 2 chr15 8685487 8685882 -94809092 + MTA_Mm LTR MaLR 1 396 0 3 651 7126 77 51 71 chr15 8685882 8687003 -94807971 + MTA_Mm-int LTR MaLR 1 1098 0 3 651 3195 32 42 3 chr15 8687005 8687384 -94807590 + MTA_Mm LTR MaLR 3 396 0 3 651 2567 66 0 62 chr15 8687384 8687403 -94807571 + MTB_Mm LTR MaLR 351 363 -44 3 651 297 0 0 0 chr15 8687438 8687471 -94807503 + (T)n Simple_repeat Simple_repeat 1 33 0 3 651 284 187 82 0 chr15 8687471 8687568 -94807406 - B1_Mur4 SINE Alu 0 150 37 3 651 431 220 0 62 chr15 8687726 8687823 -94807151 + RSINE1 SINE B4 41 131 -34 3 651 758 118 81 7 chr15 8687991 8688127 -94806847 - B1_Mus1 SINE Alu 0 148 3 3 651 1878 70 0 8 chr15 8688127 8688293 -94806681 - MT2B LTR ERVL -437 164 1 3 651 381 248 19 29 chr15 8688400 8688504 -94806470 + MLT1A1 LTR MaLR 306 408 0 3 651 312 330 34 34 chr15 8688791 8688933 -94806041 + MIR SINE MIR 56 199 -63 3 651 288 0 0 0 chr15 8688933 8688965 -94806009 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 651 312 330 34 34 chr15 8688965 8689029 -94805945 + MIR SINE MIR 200 262 0 3 651 1662 31 5 0 chr15 8689948 8690139 -94804835 - B2_Mm1t SINE B2 -1 192 1 3 651 1068 83 21 0 chr15 8690142 8690286 -94804688 - B1_Mus1 SINE Alu 0 148 2 3 651 1339 77 0 25 chr15 8690387 8690586 -94804388 + B2_Mm2 SINE B2 2 195 0 3 651 216 163 0 0 chr15 8690599 8690642 -94804332 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 651 1085 115 0 0 chr15 8690659 8690807 -94804167 - B1_Mus1 SINE Alu 0 148 1 3 651 315 0 0 0 chr15 8691961 8691996 -94802978 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 651 1208 61 0 0 chr15 8693936 8694084 -94800890 - B1_Mus1 SINE Alu 0 148 1 3 651 415 241 36 27 chr15 8694477 8694588 -94800386 - PB1D9 SINE Alu -8 112 1 3 651 2105 101 3 164 chr15 8694828 8694933 -94800041 + ORR1A2 LTR MaLR 1 91 -236 3 651 760 194 20 20 chr15 8694933 8695080 -94799894 + B1_Mus1 SINE Alu 1 147 -1 3 651 2105 101 3 164 chr15 8695080 8695364 -94799610 + ORR1A2 LTR MaLR 92 327 0 3 651 231 313 109 20 chr15 8695530 8695631 -94799343 + ORR1E LTR MaLR 1 110 -249 3 651 1672 267 59 31 chr15 8695905 8696516 -94798458 + BLACKJACK DNA AcHobo 848 1475 -1469 3 651 672 317 28 84 chr15 8696518 8696596 -94798378 + B4 SINE B4 3 80 -212 3 651 315 0 0 0 chr15 8696596 8696631 -94798343 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 3 651 672 317 28 84 chr15 8696631 8696838 -94798136 + B4 SINE B4 81 271 -21 3 651 332 119 17 0 chr15 8696854 8696913 -94798061 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 651 432 0 0 0 chr15 8697027 8697075 -94797899 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 651 1397 94 16 0 chr15 8697201 8697392 -94797582 + B2_Mm2 SINE B2 2 195 0 3 651 1192 41 0 33 chr15 8697393 8697544 -94797430 + B1_Mus2 SINE Alu 1 146 -1 3 651 306 0 0 0 chr15 8697557 8697591 -94797383 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 3 651 680 253 178 48 chr15 8697596 8698075 -94796899 + BLACKJACK DNA AcHobo 1677 2217 -727 3 651 295 268 48 112 chr15 8698130 8698336 -94796638 + ID_B1 SINE B4 30 222 -2 3 651 369 323 103 35 chr15 8698332 8698701 -94796273 + BLACKJACK DNA AcHobo 2258 2651 -293 3 651 201 121 0 0 chr15 8698702 8698735 -94796239 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 651 525 228 0 0 chr15 8698755 8698917 -94796057 + (CA)n Simple_repeat Simple_repeat 2 163 0 3 651 2383 163 88 112 chr15 8698917 8699544 -94795430 - RMER20B LTR ERVK -3 624 13 3 651 375 60 0 0 chr15 8699567 8699617 -94795357 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 651 24 77 0 0 chr15 8699701 8699753 -94795221 + AT_rich Low_complexity Low_complexity 1 52 0 3 651 402 79 0 0 chr15 8699803 8699866 -94795108 + (TG)n Simple_repeat Simple_repeat 1 63 0 3 651 301 344 94 31 chr15 8700043 8700235 -94794739 - B4A SINE B4 -88 204 1 3 651 250 348 62 24 chr15 8700296 8700505 -94794469 - L1MC4 LINE L1 -302 7740 7524 3 651 1331 74 15 64 chr15 8700508 8700537 -94794437 - B2_Mm1t SINE B2 0 193 162 3 651 243 0 0 0 chr15 8700537 8700564 -94794410 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 3 651 1331 74 15 64 chr15 8700564 8700736 -94794238 - B2_Mm1t SINE B2 -32 161 3 3 651 803 189 100 41 chr15 8701052 8701323 -94793651 + RLTR15 LTR ERVK 43 329 -30 3 651 1356 49 0 0 chr15 8701347 8701652 -94793322 + (CA)n Simple_repeat Simple_repeat 1 305 0 3 651 500 323 64 83 chr15 8701794 8702216 -94792758 - L1MC4 LINE L1 -1239 6803 6390 3 651 1121 101 0 0 chr15 8702218 8702366 -94792608 + B1_Mus1 SINE Alu 1 148 0 3 651 29 0 0 0 chr15 8702472 8702501 -94792473 + AT_rich Low_complexity Low_complexity 1 29 0 3 651 951 149 73 22 chr15 8702587 8702766 -94792208 - B2_Mm2 SINE B2 -7 188 1 3 651 222 118 0 0 chr15 8702768 8702802 -94792172 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 3 651 918 102 0 20 chr15 8702811 8702925 -94792049 - B1_Mus2 SINE Alu 0 147 34 3 651 378 130 0 0 chr15 8702925 8702994 -94791980 + L1Md_F2 LINE L1 6513 6581 -1 3 651 918 102 0 20 chr15 8702994 8703029 -94791945 - B1_Mus2 SINE Alu -114 33 1 3 651 1087 124 73 6 chr15 8703033 8703212 -94791762 - B2_Mm2 SINE B2 -3 192 2 3 651 263 262 73 51 chr15 8703297 8703434 -94791540 - L1M3 LINE L1 -1107 5033 4894 3 651 450 94 0 0 chr15 8703438 8703502 -94791472 + (TTTTC)n Simple_repeat Simple_repeat 5 68 0 3 651 425 316 117 28 chr15 8703502 8703854 -94791120 - L1MC4 LINE L1 -1253 4893 4511 3 651 533 308 16 32 chr15 8703865 8703891 -94791083 - B4A SINE B4 0 292 271 3 651 249 108 0 0 chr15 8703891 8703928 -94791046 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 651 533 308 16 32 chr15 8703928 8704089 -94790885 - B4A SINE B4 -22 270 108 3 651 229 324 39 39 chr15 8704172 8704326 -94790648 - L1MEf LINE L1 -1600 4546 4393 3 651 9048 109 19 15 chr15 8704485 8705847 -94789127 - Lx4B LINE L1 -3 7055 5688 3 651 353 330 48 37 chr15 8705902 8705943 -94789031 - L1MEf LINE L1 -4810 1432 1392 3 651 1438 83 10 5 chr15 8705943 8706136 -94788838 - B2_Mm2 SINE B2 -1 194 1 3 651 353 330 48 37 chr15 8706136 8706209 -94788765 - L1MEf LINE L1 -4851 1391 1322 3 651 387 0 0 0 chr15 8706209 8706252 -94788722 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 651 353 330 48 37 chr15 8706252 8706325 -94788649 - L1MEf LINE L1 -4921 1321 1242 3 651 236 28 56 0 chr15 8707195 8707231 -94787743 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 3 651 675 63 0 0 chr15 8707238 8707333 -94787641 - B1_Mus2 SINE Alu 0 147 53 3 651 1670 267 81 58 chr15 8707344 8707596 -94787378 - Lx9 LINE L1 -15 7629 7344 3 651 435 19 0 0 chr15 8707596 8707648 -94787326 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 651 1670 267 81 58 chr15 8707648 8707938 -94787036 - Lx9 LINE L1 -301 7343 7061 3 651 2629 119 18 5 chr15 8707938 8708327 -94786647 + ORR1B1 LTR MaLR 1 394 0 3 651 1670 267 81 58 chr15 8708327 8708439 -94786535 - Lx9 LINE L1 -584 7060 6960 3 651 2976 53 5 8 chr15 8708465 8708848 -94786126 - L1Md_F2 LINE L1 0 6582 6201 3 651 1123 77 107 0 chr15 8709542 8709711 -94785263 + B2_Mm2 SINE B2 1 187 -8 3 651 1145 62 0 27 chr15 8710864 8711014 -94783960 + B1_Mus1 SINE Alu 1 146 -2 3 651 522 0 0 0 chr15 8711014 8711072 -94783902 + (GA)n Simple_repeat Simple_repeat 2 59 0 3 651 393 22 0 0 chr15 8711482 8711528 -94783446 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 651 669 149 0 0 chr15 8712301 8712415 -94782559 + (GAA)n Simple_repeat Simple_repeat 1 114 0 3 651 278 171 14 0 chr15 8712536 8712606 -94782368 + CT-rich Low_complexity Low_complexity 2 72 0 3 651 392 247 0 0 chr15 8712625 8712714 -94782260 - PB1 SINE Alu -20 107 19 3 651 234 266 16 0 chr15 8713329 8713393 -94781581 + (TGAA)n Simple_repeat Simple_repeat 1 65 0 3 651 907 141 0 45 chr15 8713630 8713786 -94781188 + B1_Mur2 SINE Alu 1 149 0 4 651 297 75 0 0 chr15 8714540 8714580 -94780394 + (TCTG)n Simple_repeat Simple_repeat 4 43 0 4 651 513 58 0 0 chr15 8714593 8714662 -94780312 + (CA)n Simple_repeat Simple_repeat 1 69 0 4 651 859 206 42 0 chr15 8715521 8715686 -94779288 - URR1B DNA MER1_type -53 172 1 4 651 5461 71 3 21 chr15 8716219 8716938 -94778036 - L1_Mus2 LINE L1 0 6566 5861 4 651 2562 95 0 27 chr15 8716938 8716995 -94777979 + L1_Mm LINE L1 4744 4800 -1083 4 651 1168 130 15 40 chr15 8716995 8717195 -94777779 + B2_Mm2 SINE B2 1 195 0 4 651 2562 95 0 27 chr15 8717195 8717506 -94777468 + L1_Mm LINE L1 4801 5102 -781 4 651 537 280 0 15 chr15 8718061 8718195 -94776779 + Tigger7 DNA MER2_type 16 147 -2344 4 651 384 284 97 16 chr15 8718196 8718382 -94776592 + Tigger7 DNA MER2_type 2278 2478 -13 4 651 358 298 39 27 chr15 8718761 8719020 -94775954 + L1M4 LINE L1 4231 4492 -1654 4 651 294 250 0 0 chr15 8719071 8719143 -94775831 + L1M4 LINE L1 4486 4557 -1589 4 651 358 311 37 15 chr15 8719966 8720100 -94774874 + ORR1E LTR MaLR 1 137 -222 4 651 404 70 70 0 chr15 8720275 8720332 -94774642 + MYSERV6-int LTR ERVK 4958 5018 -3941 4 651 225 259 0 0 chr15 8720404 8720458 -94774516 + B1_Mur4 SINE Alu 6 59 -91 4 651 821 112 0 0 chr15 8720458 8720574 -94774400 + MYSERV6-int LTR ERVK 6336 6451 -2508 4 651 249 196 0 0 chr15 8720583 8720634 -94774340 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 4 651 7999 124 32 75 chr15 8720634 8721372 -94773602 + MYSERV6-int LTR ERVK 6469 7155 -1804 4 651 1157 81 0 0 chr15 8721372 8721520 -94773454 - B1_Mus1 SINE Alu 0 148 1 4 651 7999 124 32 75 chr15 8721520 8722287 -94772687 + MYSERV6-int LTR ERVK 7156 7910 -1049 4 651 351 152 28 140 chr15 8723272 8723379 -94771595 - L1M4c LINE L1 -3875 2507 2413 4 651 322 225 33 98 chr15 8723450 8723533 -94771441 - L1M4c LINE L1 -3956 2428 2347 4 651 1400 91 5 0 chr15 8723533 8723720 -94771254 - B2_Mm2 SINE B2 -7 188 1 4 651 322 225 33 98 chr15 8723720 8723789 -94771185 - L1M4c LINE L1 -4038 2346 2286 4 651 843 101 43 7 chr15 8723791 8723930 -94771044 - B2_Mm2 SINE B2 -4 191 48 4 651 312 313 74 35 chr15 8723937 8724248 -94770726 - L1M4c LINE L1 -4109 2275 1953 4 651 1212 35 7 0 chr15 8724365 8724510 -94770464 - B1_Mus2 SINE Alu -1 146 1 4 651 23 0 0 0 chr15 8724812 8724835 -94770139 + AT_rich Low_complexity Low_complexity 1 23 0 4 651 406 340 6 66 chr15 8726620 8726787 -94768187 - MLT1A LTR MaLR -27 347 191 4 651 252 231 0 0 chr15 8726808 8726860 -94768114 + GA-rich Low_complexity Low_complexity 1 52 0 4 651 412 311 72 17 chr15 8726862 8727042 -94767932 - MLT1A LTR MaLR -182 192 3 4 651 28 0 0 0 chr15 8727483 8727511 -94767463 + AT_rich Low_complexity Low_complexity 1 28 0 4 651 304 53 0 66 chr15 8727540 8727601 -94767373 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 4 651 741 199 35 0 chr15 8727608 8727749 -94767225 - B1_Mur4 SINE Alu 0 150 5 4 651 1456 242 30 5 chr15 8727776 8727981 -94766993 + MTEb LTR MaLR 1 205 -174 4 651 284 64 0 21 chr15 8727981 8728029 -94766945 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 4 651 1456 242 30 5 chr15 8728029 8728193 -94766781 + MTEb LTR MaLR 206 378 -1 4 651 678 285 121 32 chr15 8728564 8728879 -94766095 + MLT1D LTR MaLR 150 492 -13 4 651 230 222 13 40 chr15 8728865 8728940 -94766034 + MLT1D LTR MaLR 433 505 0 4 651 243 152 0 0 chr15 8729031 8729077 -94765897 + A-rich Low_complexity Low_complexity 1 46 0 4 651 986 84 0 7 chr15 8729077 8729220 -94765754 + (GGGA)n Simple_repeat Simple_repeat 4 145 0 4 651 1137 144 124 0 chr15 8729260 8729461 -94765513 + URR1A DNA MER1_type 1 226 0 4 651 549 314 97 12 chr15 8729935 8730134 -94764840 + B4A SINE B4 1 218 -74 4 651 288 0 0 0 chr15 8730134 8730166 -94764808 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 651 549 314 97 12 chr15 8730166 8730224 -94764750 + B4A SINE B4 219 279 -13 4 651 294 288 37 141 chr15 8732204 8732531 -94762443 - L1MA10 LINE L1 -18 6316 5865 4 651 334 296 75 55 chr15 8732520 8732827 -94762147 - L1MD LINE L1 -2713 3433 3121 4 651 1357 40 11 0 chr15 8732832 8733008 -94761966 + (TCCC)n Simple_repeat Simple_repeat 3 180 0 4 651 741 122 0 0 chr15 8733008 8733123 -94761851 + (TTTC)n Simple_repeat Simple_repeat 4 118 0 4 651 1196 302 97 26 chr15 8733226 8733722 -94761252 - MER21B LTR ERV1 -61 802 272 4 651 3434 25 0 0 chr15 8733875 8734269 -94760705 + L1_Mus1 LINE L1 6171 6564 -3 4 651 916 231 0 81 chr15 8734314 8734549 -94760425 - B3 SINE B2 0 216 1 4 651 414 0 0 0 chr15 8734587 8734633 -94760341 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 651 345 82 0 0 chr15 8734683 8734732 -94760242 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 4 651 2193 137 64 6 chr15 8735030 8735374 -94759600 - ORR1B2 LTR MaLR 0 367 4 4 651 520 263 25 32 chr15 8736302 8736459 -94758515 + B4A SINE B4 1 156 -136 4 651 810 185 6 13 chr15 8736454 8736613 -94758361 + MTC LTR MaLR 264 421 0 4 651 3080 37 5 80 chr15 8736845 8737283 -94757691 + L1_Mus2 LINE L1 6162 6566 0 4 651 336 291 0 37 chr15 8738240 8738347 -94756627 - B1F1 SINE Alu 0 149 47 4 651 255 338 59 37 chr15 8741820 8741955 -94753019 + MIRm SINE MIR 34 171 -105 4 651 1797 244 75 48 chr15 8741972 8742709 -94752265 - Charlie1 DNA MER1_type -11 2770 2014 4 651 202 224 0 0 chr15 8742827 8742876 -94752098 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 651 2014 66 73 0 chr15 8743147 8743436 -94751538 - ORR1A2 LTR MaLR 0 327 18 4 651 501 341 148 8 chr15 8743571 8743828 -94751146 - MLT1F LTR MaLR -254 294 2 4 651 1183 199 53 35 chr15 8744151 8744433 -94750541 + MTD LTR MaLR 41 327 -92 4 651 837 146 67 29 chr15 8744443 8744684 -94750290 + ORR1B1 LTR MaLR 30 394 0 4 651 348 130 72 0 chr15 8744686 8744755 -94750219 + MTD LTR MaLR 346 419 0 4 651 788 55 9 0 chr15 8744935 8745045 -94749929 + (TCTA)n Simple_repeat Simple_repeat 1 111 0 4 651 4785 173 82 11 chr15 8745046 8745958 -94749016 - Lx9 LINE L1 -168 7476 6500 4 651 377 112 394 10 chr15 8746000 8746099 -94748875 - B2_Mm2 SINE B2 -14 181 45 4 651 1186 131 11 0 chr15 8746152 8746328 -94748646 - B2_Mm1t SINE B2 -15 178 1 4 651 369 223 65 65 chr15 8746369 8746537 -94748437 - Lx9 LINE L1 -1543 6101 5934 4 651 1410 219 9 4 chr15 8746542 8746869 -94748105 + Lx9 LINE L1 5571 5934 -1710 4 651 1053 273 89 26 chr15 8747333 8747689 -94747285 - L1MA6 LINE L1 -110 6190 5794 4 651 597 28 0 0 chr15 8747689 8747760 -94747214 + (TC)n Simple_repeat Simple_repeat 2 72 0 4 651 1053 273 89 26 chr15 8747760 8747910 -94747064 - L1MA6 LINE L1 -507 5793 5652 4 651 574 262 35 117 chr15 8747926 8748440 -94746534 + L1MA6 LINE L1 5159 5630 -682 4 651 621 0 0 0 chr15 8749024 8749093 -94745881 + (TC)n Simple_repeat Simple_repeat 1 69 0 4 651 416 204 51 34 chr15 8749102 8749280 -94745694 - RMER17C LTR ERVK -133 277 97 4 651 227 340 52 52 chr15 8749361 8749572 -94745402 - L1MEd LINE L1 -4914 1205 995 4 651 240 35 0 0 chr15 8749998 8750027 -94744947 + (T)n Simple_repeat Simple_repeat 1 29 0 4 651 8305 48 3 2 chr15 8750220 8751481 -94743493 - L1Md_F2 LINE L1 0 6582 5321 4 651 180 49 47 47 chr15 8752984 8753027 -94741947 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 4 651 1161 62 14 0 chr15 8753027 8753172 -94741802 - B1_Mus1 SINE Alu 0 148 2 4 651 1104 163 119 0 chr15 8753340 8753542 -94741432 - URR1A DNA MER1_type 0 226 1 4 651 2158 224 159 27 chr15 8754116 8754746 -94740228 - Lx8 LINE L1 -3 7470 6758 4 651 527 318 32 25 chr15 8755030 8755188 -94739786 - RSINE1 SINE B4 -2 163 5 4 651 22 0 0 0 chr15 8755251 8755273 -94739701 + AT_rich Low_complexity Low_complexity 1 22 0 4 651 1543 32 31 21 chr15 8755282 8755473 -94739501 + B2_Mm1a SINE B2 1 193 0 4 651 1580 42 11 0 chr15 8755482 8755673 -94739301 - B2_Mm1t SINE B2 0 193 1 4 651 1248 95 43 27 chr15 8755680 8755864 -94739110 - B2_Mm2 SINE B2 -7 188 2 4 651 461 179 23 171 chr15 8755937 8756112 -94738862 - B1F SINE Alu 0 149 1 4 651 19591 54 7 3 chr15 8756932 8760080 -94734894 - L1Md_F2 LINE L1 0 6582 3423 4 651 1270 19 0 0 chr15 8760376 8760534 -94734440 + B2_Mm1t SINE B2 1 158 -35 4 651 189 0 0 0 chr15 8760534 8760555 -94734419 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 4 651 1084 109 0 6 chr15 8760555 8760572 -94734402 + B2_Mm2 SINE B2 158 174 -21 4 651 3185 64 8 2 chr15 8761177 8761571 -94733403 - MTA_Mm LTR MaLR 0 396 1 4 651 235 258 125 29 chr15 8761691 8761827 -94733147 - MER53 DNA hAT 0 193 45 4 651 262 188 86 14 chr15 8762779 8762849 -94732125 + MIR SINE MIR 131 205 -57 4 651 1594 207 73 18 chr15 8763483 8763882 -94731092 + MTC LTR MaLR 1 421 0 4 651 1595 31 0 55 chr15 8764003 8764205 -94730769 + B2_Mm1a SINE B2 2 192 -1 4 651 868 206 30 72 chr15 8764251 8764385 -94730589 - URR1A DNA MER1_type 0 226 94 4 651 1549 37 27 0 chr15 8764385 8764572 -94730402 + B2_Mm1a SINE B2 2 193 0 4 651 868 206 30 72 chr15 8764572 8764593 -94730381 - URR1A DNA MER1_type -133 93 81 4 651 1204 68 0 0 chr15 8764593 8764741 -94730233 + B1_Mus1 SINE Alu 1 148 0 4 651 868 206 30 72 chr15 8764741 8764820 -94730154 - URR1A DNA MER1_type -146 80 1 4 651 1075 214 186 20 chr15 8764831 8765175 -94729799 + RMER15 LTR ERVL 27 427 -148 4 651 249 200 33 0 chr15 8765190 8765250 -94729724 - MTD LTR MaLR -8 411 350 4 651 254 333 45 45 chr15 8765866 8765998 -94728976 - MIR3 SINE MIR -66 142 11 4 651 423 303 0 0 chr15 8768266 8768375 -94726599 + RSINE1 SINE B4 23 131 -34 4 651 1714 210 97 82 chr15 8768413 8768988 -94725986 - RLTR31A_Mm LTR ERVK 0 584 1 4 651 287 255 26 43 chr15 8768988 8769098 -94725876 + MER2B DNA MER2_type 166 273 -63 4 651 397 259 8 51 chr15 8769263 8769381 -94725593 - PB1D9 SINE Alu -7 113 1 4 651 180 125 0 0 chr15 8769485 8769517 -94725457 + (T)n Simple_repeat Simple_repeat 1 32 0 4 651 1142 251 46 97 chr15 8769543 8770121 -94724853 - RLTR18B LTR ERVK -1 615 91 4 651 1421 70 27 5 chr15 8770121 8770309 -94724665 - B2_Mm2 SINE B2 -3 192 1 4 651 1101 269 68 133 chr15 8770309 8770374 -94724600 - RLTR18B LTR ERVK -526 90 14 4 651 2115 77 28 16 chr15 8771246 8771564 -94723410 - RLTRETN_Mm LTR ERVK 0 322 1 4 651 5360 36 39 3 chr15 8771564 8772226 -94722748 - MMETn-int LTR ERVK 0 4844 4159 4 651 3051 58 0 5 chr15 8772216 8772640 -94722334 - MMETn-int LTR ERVK -2933 381 1 4 651 2115 77 28 16 chr15 8772640 8772958 -94722016 - RLTRETN_Mm LTR ERVK 0 322 1 4 651 5528 99 25 42 chr15 8773489 8774391 -94720583 - RMER17D LTR ERVK -2 887 1 4 651 294 315 22 0 chr15 8774409 8774498 -94720476 + GA-rich Low_complexity Low_complexity 2 92 0 4 651 243 200 55 136 chr15 8774996 8775106 -94719868 + MLT1J LTR MaLR 1 101 -264 4 651 594 156 74 52 chr15 8775373 8775508 -94719466 - B1_Mur2 SINE Alu -10 139 2 5 651 309 148 0 3 chr15 8776274 8776336 -94718638 + B1_Mur4 SINE Alu 58 148 -2 5 651 186 43 0 0 chr15 8776345 8776368 -94718606 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 5 651 1453 126 9 13 chr15 8776499 8776725 -94718249 + URR1B DNA MER1_type 1 225 0 5 651 458 220 0 57 chr15 8777264 8777370 -94717604 - RSINE1 SINE B4 -55 110 11 5 651 458 296 22 29 chr15 8777399 8777535 -94717439 - Lx7 LINE L1 -1966 5730 5596 5 651 284 312 82 20 chr15 8777535 8777682 -94717292 - MLT1A0 LTR MaLR -206 159 4 5 651 276 280 83 25 chr15 8777709 8777830 -94717144 + MLT1J LTR MaLR 246 373 -139 4 651 393 309 18 36 chr15 8778356 8778524 -94716450 - RSINE1 SINE B4 0 165 1 5 651 189 0 0 0 chr15 8778668 8778689 -94716285 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 5 651 1264 92 16 47 chr15 8778797 8778990 -94715984 + B2_Mm2 SINE B2 5 191 -4 5 651 483 18 0 0 chr15 8779080 8779136 -94715838 + (TTCC)n Simple_repeat Simple_repeat 2 57 0 5 651 191 36 36 0 chr15 8779130 8779158 -94715816 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 651 1102 94 11 23 chr15 8779179 8779353 -94715621 - B2_Mm2 SINE B2 -23 172 1 5 651 242 295 191 10 chr15 8779353 8779641 -94715333 + Charlie2b DNA MER1_type 1988 2327 -455 5 651 301 253 0 0 chr15 8779681 8779760 -94715214 + (TA)n Simple_repeat Simple_repeat 2 80 0 5 651 275 0 29 0 chr15 8779783 8779818 -94715156 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 5 651 465 212 26 70 chr15 8779852 8779904 -94715070 - MTD LTR MaLR -14 405 318 5 651 1840 118 82 14 chr15 8779904 8780195 -94714779 - RLTR10E LTR ERVK 0 311 1 5 651 465 216 24 77 chr15 8780195 8780296 -94714678 - MTD LTR MaLR -51 368 283 5 651 839 266 80 49 chr15 8780320 8780608 -94714366 - MTD LTR MaLR -116 303 7 5 651 1582 202 121 0 chr15 8780608 8780979 -94713995 - Lx9 LINE L1 -788 6856 6441 5 651 284 75 0 0 chr15 8780980 8781020 -94713954 + RMER6C LTR ERVK 650 689 -1 5 651 325 119 101 29 chr15 8781025 8781094 -94713880 + RMER1C Other Other 1260 1333 -9 5 651 225 171 171 0 chr15 8781224 8781300 -94713674 - Lx9 LINE L1 0 7644 7556 5 651 253 244 11 55 chr15 8781514 8781605 -94713369 - ID_B1 SINE B4 -40 184 98 5 652 2715 99 28 13 chr15 8781861 8782258 -94712716 - RLTR9D LTR ERVK 0 403 1 5 652 3367 35 5 2 chr15 8782692 8783087 -94711887 - MTA_Mm LTR MaLR 0 396 1 5 652 184 30 29 29 chr15 8783873 8783907 -94711067 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 652 1167 105 27 46 chr15 8783931 8784150 -94710824 - Lx LINE L1 -5 6649 6435 5 652 1074 145 44 20 chr15 8784791 8784995 -94709979 + URR1A DNA MER1_type 1 209 -17 5 652 248 259 144 11 chr15 8785303 8785393 -94709581 + PB1D10 SINE Alu 2 103 -14 5 652 265 222 232 12 chr15 8785875 8785957 -94709017 - ID_B1 SINE B4 -33 191 92 5 652 7593 92 6 18 chr15 8785970 8787412 -94707562 - L1_Mus3 LINE L1 -7 6631 5200 5 652 355 258 0 127 chr15 8787414 8787556 -94707418 - L1M2 LINE L1 -713 5599 5476 5 652 384 82 0 0 chr15 8787556 8787617 -94707357 + (T)n Simple_repeat Simple_repeat 1 61 0 5 652 973 86 57 7 chr15 8787620 8787760 -94707214 - B1_Mus2 SINE Alu 0 147 1 5 652 939 271 10 26 chr15 8787796 8788031 -94706943 - ID_B1 SINE B4 -55 237 9 5 652 231 61 0 0 chr15 8788045 8788078 -94706896 + (T)n Simple_repeat Simple_repeat 1 33 0 5 652 362 218 90 0 chr15 8788517 8788595 -94706379 - Lx9 LINE L1 -632 7012 6928 5 652 2291 200 60 12 chr15 8788644 8789071 -94705903 + RMER1B Other Other 387 947 -119 5 652 183 42 0 0 chr15 8789071 8789095 -94705879 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 5 652 2291 188 65 9 chr15 8789095 8789139 -94705835 + RMER1B Other Other 948 998 -68 5 652 1260 300 22 3 chr15 8789167 8789525 -94705449 - Lx9 LINE L1 -694 6950 6586 5 652 914 272 104 20 chr15 8789551 8789907 -94705067 + Lx9 LINE L1 7056 7441 -203 5 652 201 74 0 0 chr15 8789909 8789936 -94705038 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 652 318 237 61 49 chr15 8789941 8790105 -94704869 + Lx9 LINE L1 7479 7644 0 5 652 2150 108 13 3 chr15 8790124 8790430 -94704544 + RLTR27 LTR ERVK 1 309 0 5 652 1805 275 59 34 chr15 8790436 8791031 -94703943 - Lx8 LINE L1 -535 6938 6329 5 652 344 295 108 20 chr15 8791028 8791232 -94703742 + Lx8 LINE L1 6970 7191 -282 5 652 354 45 0 0 chr15 8791259 8791303 -94703671 + (GA)n Simple_repeat Simple_repeat 2 45 0 5 652 247 228 24 37 chr15 8791460 8791542 -94703432 + GA-rich Low_complexity Low_complexity 5 85 0 5 652 272 320 87 82 chr15 8792065 8792245 -94702729 + L2b LINE L2 3013 3209 -217 5 652 2212 117 60 82 chr15 8792245 8792646 -94702328 + RLTR9C LTR ERVK 2 393 0 5 652 272 320 87 82 chr15 8792646 8792660 -94702314 + L2b LINE L2 3210 3220 -206 5 652 1270 77 32 37 chr15 8792660 8792848 -94702126 - B2_Mm2 SINE B2 -8 187 1 5 652 313 320 87 82 chr15 8792848 8793064 -94701910 + L2b LINE L2 3221 3426 0 5 652 895 259 9 5 chr15 8793064 8793277 -94701697 + B3 SINE B2 3 216 0 5 652 673 274 54 0 chr15 8794262 8794466 -94700508 + B3 SINE B2 1 215 -1 5 652 378 0 0 0 chr15 8794819 8794861 -94700113 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 5 652 356 259 19 0 chr15 8795196 8795304 -94699670 - L1ME1 LINE L1 -280 5899 5790 5 652 233 143 0 60 chr15 8795305 8795312 -94699662 + (TTATA)n Simple_repeat Simple_repeat 2 8 0 5 652 198 50 24 48 chr15 8795312 8795354 -94699620 + (CATA)n Simple_repeat Simple_repeat 3 43 0 5 652 233 143 0 60 chr15 8795354 8795413 -94699561 + (TTATA)n Simple_repeat Simple_repeat 2 56 0 5 652 789 272 67 7 chr15 8795433 8795718 -94699256 - L1ME1 LINE L1 -404 5775 5474 5 652 442 308 42 0 chr15 8796264 8796407 -94698567 + RSINE1 SINE B4 1 149 -16 5 652 1140 90 0 0 chr15 8796750 8796974 -94698000 + (TC)n Simple_repeat Simple_repeat 1 224 0 5 652 216 86 0 0 chr15 8797299 8797334 -94697640 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 652 638 125 10 0 chr15 8797334 8797438 -94697536 - B2_Mm2 SINE B2 -89 106 2 5 652 218 32 32 0 chr15 8797546 8797577 -94697397 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 5 652 1029 23 8 0 chr15 8797585 8797717 -94697257 - B1_Mus2 SINE Alu 0 147 15 5 652 313 279 71 9 chr15 8798137 8798249 -94696725 + LTR65 LTR ERV1 202 320 -349 5 652 957 291 79 11 chr15 8798553 8798907 -94696067 + MTEb LTR MaLR 1 378 -1 5 652 274 352 188 3 chr15 8800079 8800367 -94694607 + LTR16C LTR ERVL 149 489 0 5 652 226 270 54 43 chr15 8800659 8800681 -94694293 - BC1_Mm scRNA scRNA -57 95 27 5 652 264 246 0 62 chr15 8800681 8800746 -94694228 - tRNA-Ala-GCY_ tRNA tRNA -11 64 4 5 652 1200 49 0 0 chr15 8800849 8800991 -94693983 + B1_Mm SINE Alu 2 143 -4 5 652 236 396 15 65 chr15 8801333 8801595 -94693379 + L2 LINE L2 115 363 -3056 5 652 591 256 71 27 chr15 8802371 8802596 -94692378 + MER2 DNA MER2_type 21 255 -90 5 652 404 285 138 18 chr15 8803554 8803829 -94691145 + LTR40b LTR ERVL 153 460 -2 5 652 683 282 18 98 chr15 8803891 8804217 -94690757 - MER33 DNA MER1_type -24 300 1 5 652 299 202 23 45 chr15 8805137 8805225 -94689749 - Lx8 LINE L1 -2 7471 7386 5 652 695 246 101 15 chr15 8805577 8805775 -94689199 + B3 SINE B2 2 216 0 5 652 231 335 90 45 chr15 8807174 8807352 -94687622 - LTR16C LTR ERVL -2 487 302 5 652 320 329 33 65 chr15 8807466 8807619 -94687355 - LTR16C LTR ERVL -338 151 4 5 652 10146 252 27 56 chr15 8807958 8808752 -94686222 + L1_Mur3 LINE L1 828 1591 -4289 5 652 7919 49 1 2 chr15 8808752 8809713 -94685261 + L1Md_F2 LINE L1 5621 6580 -2 5 652 10146 213 46 21 chr15 8809713 8811881 -94683093 + L1_Mur3 LINE L1 1592 3824 -2056 5 652 1140 103 6 0 chr15 8811888 8812053 -94682921 + B2_Mm1t SINE B2 6 171 -22 5 652 2010 110 0 0 chr15 8812054 8812345 -94682629 - L1_Mur2 LINE L1 -1592 4285 3995 5 652 3095 254 45 12 chr15 8812426 8813188 -94681786 + Lx7 LINE L1 6568 7354 -342 5 652 2998 79 7 17 chr15 8813190 8813601 -94681373 + MTB_Mm LTR MaLR 1 407 0 5 652 245 98 24 0 chr15 8814231 8814272 -94680702 + (TTC)n Simple_repeat Simple_repeat 2 43 0 5 652 412 321 9 84 chr15 8814289 8814503 -94680471 + B3A SINE B2 1 198 0 5 652 699 46 0 0 chr15 8814982 8815069 -94679905 + (GA)n Simple_repeat Simple_repeat 2 88 0 5 652 730 56 19 9 chr15 8815069 8815177 -94679797 + (GGGGA)n Simple_repeat Simple_repeat 4 112 0 5 652 275 280 150 0 chr15 8816769 8816869 -94678105 - PB1D10 SINE Alu 0 117 3 5 652 360 0 0 0 chr15 8817856 8817896 -94677078 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 652 441 0 0 0 chr15 8817911 8817960 -94677014 + (ATGTG)n Simple_repeat Simple_repeat 1 49 0 5 652 312 279 8 67 chr15 8818231 8818350 -94676624 - MLT1A LTR MaLR -197 177 66 5 652 359 336 0 9 chr15 8818407 8818512 -94676462 + MER2 DNA MER2_type 241 344 -1 5 652 295 109 345 9 chr15 8818545 8818655 -94676319 - B2_Mm2 SINE B2 -2 193 47 5 652 1305 96 23 0 chr15 8818687 8818864 -94676110 - B2_Mm2 SINE B2 -13 182 2 5 652 332 306 118 15 chr15 8819095 8819231 -94675743 - MER2 DNA MER2_type -109 236 87 5 652 321 336 8 8 chr15 8819336 8819453 -94675521 - MER2B DNA MER2_type -171 165 49 5 652 290 320 107 0 chr15 8819591 8819694 -94675280 - ID_B1 SINE B4 -9 215 102 5 652 292 352 52 66 chr15 8819878 8819975 -94674999 - LTR48B LTR ERV1 0 644 546 5 652 1254 84 51 0 chr15 8819975 8820153 -94674821 + B2_Mm2 SINE B2 2 188 -7 5 652 292 352 52 66 chr15 8820153 8820326 -94674648 - LTR48B LTR ERV1 -99 545 379 5 652 263 352 85 30 chr15 8820748 8820912 -94674062 - L2a LINE L2 -257 3169 2997 5 652 226 237 0 0 chr15 8821159 8821218 -94673756 - L1MD LINE L1 -1471 4675 4617 5 652 675 281 212 32 chr15 8821299 8821883 -94673091 + L1ME1 LINE L1 4015 4703 -1443 5 652 1193 266 42 14 chr15 8822035 8822394 -94672580 + L1ME1 LINE L1 5375 5743 -421 5 652 313 328 43 58 chr15 8822527 8822619 -94672355 + MER21B LTR ERV1 100 196 -667 5 652 1190 35 0 0 chr15 8822619 8822762 -94672212 + B1_Mus2 SINE Alu 2 144 -3 6 652 441 0 0 0 chr15 8822762 8822811 -94672163 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 6 652 313 328 43 58 chr15 8822811 8822905 -94672069 + MER21B LTR ERV1 197 283 -580 5 652 286 279 144 60 chr15 8822944 8823297 -94671677 + MTEa LTR MaLR 4 396 -12 6 652 397 337 92 75 chr15 8823366 8823712 -94671262 + MER21B LTR ERV1 405 756 -107 5 652 288 234 10 41 chr15 8823790 8823888 -94671086 - MER34 LTR ERV1 -65 477 383 6 652 278 325 29 19 chr15 8824436 8824643 -94670331 + L1ME1 LINE L1 5759 5967 -212 5 652 198 0 0 0 chr15 8824902 8824924 -94670050 + (TTTTC)n Simple_repeat Simple_repeat 4 25 0 6 652 348 267 24 32 chr15 8825057 8825181 -94669793 - MamRep1161 DNA TcMar -806 151 29 6 652 1561 42 0 50 chr15 8825541 8825743 -94669231 - B2_Mm1a SINE B2 -1 192 1 6 652 1648 188 99 33 chr15 8825743 8826107 -94668867 - Lx2 LINE L1 0 6997 6610 6 652 689 199 66 0 chr15 8826773 8826909 -94668065 - B1_Mus2 SINE Alu -2 145 1 6 652 2851 152 136 0 chr15 8826944 8827459 -94667515 - RMER4B LTR ERVK 0 585 1 6 652 349 308 120 50 chr15 8827707 8827804 -94667170 + L1_Rod LINE L1 5127 5223 -624 6 652 552 30 0 0 chr15 8827804 8827870 -94667104 + (CA)n Simple_repeat Simple_repeat 2 67 0 6 652 405 0 0 0 chr15 8827870 8827914 -94667060 + (TC)n Simple_repeat Simple_repeat 1 45 0 6 652 475 258 68 86 chr15 8827914 8828284 -94666690 + L1M1 LINE L1 5308 5643 -540 6 652 585 294 62 6 chr15 8828284 8828462 -94666512 + MTEa LTR MaLR 1 188 -191 6 652 1046 282 56 15 chr15 8828504 8828774 -94666200 + B4 SINE B4 8 288 -4 6 652 445 133 0 72 chr15 8831308 8831325 -94663649 + polypyrimidine Low_complexity Low_complexity 114 129 0 6 652 1282 0 5 38 chr15 8831325 8831510 -94663464 + (TTC)n Simple_repeat Simple_repeat 2 180 0 6 652 445 133 0 72 chr15 8831510 8831579 -94663395 + polypyrimidine Low_complexity Low_complexity 52 113 0 6 652 1103 28 0 53 chr15 8831579 8831769 -94663205 + (TTC)n Simple_repeat Simple_repeat 1 180 0 6 652 445 133 0 72 chr15 8831769 8831819 -94663155 + polypyrimidine Low_complexity Low_complexity 2 51 0 6 652 192 77 0 0 chr15 8835116 8835142 -94659832 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 6 652 202 189 0 0 chr15 8835142 8835179 -94659795 + C-rich Low_complexity Low_complexity 1 37 0 6 652 1086 282 81 14 chr15 8835462 8835894 -94659080 - L1MC1 LINE L1 -19 6314 5854 6 652 305 231 218 18 chr15 8836056 8836166 -94658808 - PB1D10 SINE Alu -8 141 10 6 652 553 279 27 11 chr15 8836189 8836374 -94658600 - L1MC1 LINE L1 -564 5769 5582 6 652 333 0 0 0 chr15 8836403 8836440 -94658534 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 6 652 24 0 0 0 chr15 8836476 8836500 -94658474 + AT_rich Low_complexity Low_complexity 1 24 0 6 652 369 231 179 37 chr15 8836724 8836886 -94658088 - L1MC1 LINE L1 -778 5566 5382 6 652 825 262 178 33 chr15 8836908 8837452 -94657522 - L1MC1 LINE L1 -849 5297 4675 6 652 593 253 80 36 chr15 8837700 8837975 -94656999 - L1MC1 LINE L1 -1460 4686 4400 6 652 607 268 41 22 chr15 8838034 8838206 -94656768 - B3A SINE B2 -42 174 1 6 652 993 217 14 14 chr15 8838209 8838424 -94656550 - B3 SINE B2 -1 215 1 6 652 959 278 110 7 chr15 8838426 8838835 -94656139 - L1MC1 LINE L1 -1671 4475 4025 6 652 215 100 50 0 chr15 8839537 8839577 -94655397 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 6 652 11253 72 6 3 chr15 8839578 8841102 -94653872 - L1_Mur1 LINE L1 -995 4891 3363 6 652 1368 228 83 11 chr15 8841444 8841817 -94653157 + MTD LTR MaLR 18 417 -2 6 652 609 52 0 0 chr15 8841967 8842044 -94652930 + (GGA)n Simple_repeat Simple_repeat 3 79 0 6 652 552 0 0 0 chr15 8843500 8843566 -94651408 - MTB LTR MaLR 0 400 335 6 652 4079 58 13 22 chr15 8843561 8844157 -94650817 - MTA_Mm-int LTR MaLR -507 591 1 6 652 3311 38 2 10 chr15 8844157 8844556 -94650418 - MTA_Mm LTR MaLR 0 396 1 6 652 396 330 110 49 chr15 8845333 8845578 -94649396 + MTEa LTR MaLR 41 300 -79 6 652 1236 145 28 5 chr15 8845584 8845799 -94649175 - URR1B DNA MER1_type -5 220 1 6 652 349 188 0 0 chr15 8845803 8845872 -94649102 + MTEa LTR MaLR 311 379 0 6 652 324 0 0 0 chr15 8846056 8846092 -94648882 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 652 240 264 92 119 chr15 8846842 8846864 -94648110 - B2_Mm1a SINE B2 -10 183 161 6 652 477 0 0 0 chr15 8846864 8846917 -94648057 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 652 564 252 39 52 chr15 8846917 8847079 -94647895 - B3A SINE B2 -33 160 4 6 652 868 120 0 14 chr15 8847445 8847589 -94647385 - B1_Mus2 SINE Alu 0 147 6 6 652 3493 120 38 9 chr15 8848358 8848888 -94646086 - L1_Mm LINE L1 -50 5833 5289 6 652 8302 77 14 7 chr15 8848929 8850723 -94644251 - L1Md_F2 LINE L1 -1 6581 4785 6 652 4784 151 12 11 chr15 8850725 8851540 -94643434 - L1_Mur1 LINE L1 -583 5303 4488 6 652 3054 122 0 24 chr15 8851525 8852027 -94642947 + Lx2 LINE L1 5790 6279 -718 6 652 3410 114 47 6 chr15 8852031 8852562 -94642412 + Lx2 LINE L1 6434 6986 -11 6 652 1151 112 6 0 chr15 8852562 8852741 -94642233 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 6 652 473 32 16 0 chr15 8852742 8852805 -94642169 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 6 652 369 0 0 0 chr15 8853281 8853322 -94641652 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 652 512 138 62 16 chr15 8853606 8853726 -94641248 + RMER19B LTR ERVK 357 455 -447 6 652 185 320 82 0 chr15 8853745 8853842 -94641132 + MIRc SINE MIR 17 121 -147 6 652 31784 75 14 18 chr15 8854370 8855677 -94639297 - L1_Mus2 LINE L1 -2 6564 5288 6 652 4831 50 0 3 chr15 8855677 8856264 -94638710 - L1Md_F2 LINE L1 0 6582 5998 6 652 31784 113 20 19 chr15 8856264 8861134 -94633840 - L1_Mus2 LINE L1 -596 5287 389 6 652 1534 207 98 51 chr15 8861887 8862336 -94632638 + RMER19C LTR ERVK 142 611 0 6 652 277 318 137 50 chr15 8862825 8863007 -94631967 - Charlie7 DNA MER1_type -2359 253 56 6 652 180 53 79 0 chr15 8863144 8863182 -94631792 + (TTGGGG)n Simple_repeat Simple_repeat 6 46 0 6 652 2370 81 19 9 chr15 8863425 8863749 -94631225 + ORR1A2 LTR MaLR 1 327 0 6 652 22 35 0 0 chr15 8863990 8864019 -94630955 + AT_rich Low_complexity Low_complexity 1 29 0 6 652 313 159 236 11 chr15 8865321 8865410 -94629564 - Lx9 LINE L1 -230 7414 7306 6 652 238 175 0 0 chr15 8865590 8865630 -94629344 - ORR1C2 LTR MaLR -2 382 343 6 652 1037 128 35 0 chr15 8865632 8865804 -94629170 + B2_Mm2 SINE B2 15 192 -3 6 652 230 261 186 63 chr15 8865831 8866068 -94628906 - Charlie4 DNA MER1_type -1691 270 5 6 652 222 261 0 0 chr15 8866673 8866719 -94628255 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 652 751 174 87 53 chr15 8867232 8867438 -94627536 + B3 SINE B2 4 216 0 6 652 1855 117 40 19 chr15 8867950 8868272 -94626702 - IAPEY_LTR LTR ERVK -2 383 55 6 652 2077 71 0 0 chr15 8868272 8868526 -94626448 - IAPEY3-int LTR ERVK 0 7581 7328 6 652 28063 58 7 1 chr15 8868539 8871960 -94623014 - IAPEY3-int LTR ERVK -420 7260 3820 6 652 32810 28 0 1 chr15 8871962 8876540 -94618434 - L1Md_T LINE L1 0 6582 2009 6 652 1088 55 0 0 chr15 8876540 8876668 -94618306 - IAPEY3-int LTR ERVK -3733 3947 3820 6 652 7387 165 21 23 chr15 8876661 8877986 -94616988 - IAPEy-int LTR ERVK -6191 1322 1 6 652 1847 102 42 4 chr15 8877986 8878297 -94616677 - IAPEY2_LTR LTR ERVK 0 411 32 6 652 38 0 0 0 chr15 8879809 8879847 -94615127 + AT_rich Low_complexity Low_complexity 1 38 0 6 652 1134 64 7 0 chr15 8879850 8879991 -94614983 - B1_Mm SINE Alu -5 142 1 6 652 254 372 10 0 chr15 8880450 8880552 -94614422 + MLT1J LTR MaLR 73 175 -337 6 652 388 337 67 62 chr15 8880844 8881037 -94613937 + MER20 DNA MER1_type 2 195 -24 6 652 22 56 0 0 chr15 8881733 8881769 -94613205 + AT_rich Low_complexity Low_complexity 1 36 0 6 652 2164 131 58 15 chr15 8881891 8882167 -94612807 - RLTR31_Mm LTR ERVK -149 412 134 6 652 252 0 0 0 chr15 8882167 8882195 -94612779 + (TTCTCC)n Simple_repeat Simple_repeat 6 33 0 6 652 2164 131 58 15 chr15 8882195 8882313 -94612661 - RLTR31_Mm LTR ERVK -428 133 2 6 652 2029 110 49 58 chr15 8882672 8883001 -94611973 + ORR1A3 LTR MaLR 1 326 0 6 652 309 298 21 0 chr15 8883698 8883792 -94611182 + GA-rich Low_complexity Low_complexity 2 97 0 6 652 431 138 18 0 chr15 8883792 8883901 -94611073 + (CAGA)n Simple_repeat Simple_repeat 2 112 0 6 652 302 0 26 0 chr15 8885334 8885372 -94609602 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 652 233 330 41 10 chr15 8886084 8886182 -94608792 - MIRb SINE MIR -116 152 52 6 652 980 101 18 12 chr15 8886208 8886378 -94608596 + (TTTC)n Simple_repeat Simple_repeat 4 174 0 6 652 593 253 134 6 chr15 8886422 8886460 -94608514 - B3 SINE B2 -14 202 163 6 652 416 67 0 16 chr15 8886460 8886521 -94608453 + (TG)n Simple_repeat Simple_repeat 1 60 0 6 652 623 211 159 0 chr15 8886521 8886661 -94608313 - B3A SINE B2 -54 162 1 6 652 2066 165 67 19 chr15 8887950 8888326 -94606648 - ORR1B1 LTR MaLR 0 394 1 6 652 402 213 0 0 chr15 8888357 8888451 -94606523 + (TATG)n Simple_repeat Simple_repeat 2 95 0 6 652 775 212 206 0 chr15 8888455 8888625 -94606349 - B3 SINE B2 -11 205 1 6 652 3308 96 42 0 chr15 8889479 8889936 -94605038 + Lx2 LINE L1 6522 6997 0 6 652 242 319 11 42 chr15 8890753 8890848 -94604126 - L2a LINE L2 -5 3421 3279 6 652 361 327 88 14 chr15 8891330 8891547 -94603427 + MIRb SINE MIR 28 260 -8 6 652 430 381 11 22 chr15 8893151 8893336 -94601638 + MLT1H1 LTR MaLR 9 191 -364 6 652 221 220 20 0 chr15 8893420 8893470 -94601504 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 652 893 358 86 112 chr15 8893773 8894454 -94600520 + MLT1H1-int LTR MaLR 83 787 -622 6 652 1036 242 29 5 chr15 8894454 8894662 -94600312 + B3 SINE B2 1 213 -3 6 652 893 358 86 112 chr15 8894662 8895303 -94599671 + MLT1H1-int LTR MaLR 788 1375 -34 6 652 2323 123 9 9 chr15 8895303 8895632 -94599342 - ORR1A4 LTR MaLR 0 329 1 6 652 893 358 86 112 chr15 8895632 8895659 -94599315 + MLT1H1-int LTR MaLR 1376 1398 -11 6 652 368 209 93 0 chr15 8896109 8896195 -94598779 + MLT1H2 LTR MaLR 392 485 -4 6 652 635 225 21 28 chr15 8896340 8896482 -94598492 - B1F1 SINE Alu 0 149 9 6 652 1339 246 55 26 chr15 8896717 8897138 -94597836 - L1MD LINE L1 -2533 3613 3181 6 652 786 163 0 0 chr15 8897172 8897313 -94597661 + (TA)n Simple_repeat Simple_repeat 2 142 0 6 652 2846 309 48 21 chr15 8897316 8898347 -94596627 - Lx8 LINE L1 -73 7400 6342 6 652 384 103 0 0 chr15 8898446 8898504 -94596470 + (TC)n Simple_repeat Simple_repeat 2 59 0 6 652 393 22 0 0 chr15 8898504 8898550 -94596424 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 652 302 245 81 15 chr15 8898554 8898665 -94596309 - Lx8 LINE L1 -1527 6169 6068 6 652 3365 244 112 27 chr15 8898660 8899346 -94595628 + Lx8 LINE L1 4569 5314 -566 7 652 2035 196 39 12 chr15 8899346 8899754 -94595220 - MTD LTR MaLR 0 419 1 7 652 3365 247 139 27 chr15 8899754 8900392 -94594582 + Lx8 LINE L1 5315 6042 -1431 7 652 27 62 0 0 chr15 8901475 8901523 -94593451 + AT_rich Low_complexity Low_complexity 1 48 0 7 652 226 309 31 10 chr15 8902227 8902325 -94592649 - L3 LINE CR1 -203 4286 4187 7 652 2042 135 78 40 chr15 8902914 8903284 -94591690 - ORR1C2 LTR MaLR 0 384 1 7 652 1856 101 45 75 chr15 8903534 8903738 -94591236 + ORR1A4 LTR MaLR 1 186 -143 7 652 3278 56 5 15 chr15 8903738 8904138 -94590836 - MTA_Mm LTR MaLR 0 396 1 7 652 1856 101 45 75 chr15 8904138 8904264 -94590710 + ORR1A4 LTR MaLR 187 321 -8 7 652 3040 124 19 2 chr15 8904703 8905164 -94589810 - Lx4B LINE L1 -653 6405 5937 7 652 377 295 126 29 chr15 8905221 8905462 -94589512 + MLT1A0 LTR MaLR 108 374 0 7 652 1462 278 39 41 chr15 8906250 8906662 -94588312 - Lx6 LINE L1 -30 7430 7023 7 652 3457 100 87 58 chr15 8906662 8907000 -94587974 + RMER2 LTR ERV1 1 359 -208 7 652 198 71 0 0 chr15 8907000 8907028 -94587946 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 652 3457 100 87 58 chr15 8907028 8907240 -94587734 + RMER2 LTR ERV1 360 566 -1 7 652 1462 307 44 44 chr15 8907240 8907360 -94587614 - Lx6 LINE L1 -438 7022 6945 7 652 741 55 3 5 chr15 8907513 8907622 -94587352 + B2_Mm2 SINE B2 4 111 -82 7 652 592 304 89 32 chr15 8907811 8908216 -94586758 - L1MEc LINE L1 -1608 4711 4284 7 652 229 316 54 72 chr15 8908260 8908388 -94586586 - L1MEc LINE L1 -2031 4288 4156 7 652 1334 117 16 0 chr15 8908388 8908576 -94586398 - B2_Mm2 SINE B2 -3 192 2 7 652 229 316 54 72 chr15 8908576 8908614 -94586360 - L1MEc LINE L1 -2164 4155 4125 7 652 587 295 133 5 chr15 8908818 8909186 -94585788 - L1MEc LINE L1 -5815 585 171 7 652 21 0 0 0 chr15 8909640 8909661 -94585313 + AT_rich Low_complexity Low_complexity 1 21 0 7 652 384 204 224 0 chr15 8910393 8910491 -94584483 - B1_Mur2 SINE Alu 0 120 1 7 652 468 320 40 20 chr15 8910510 8910762 -94584212 - L1_Mur3 LINE L1 -4006 1874 1618 7 652 2076 122 98 16 chr15 8910766 8911132 -94583842 + MTB_Mm LTR MaLR 1 396 -11 7 652 21 0 0 0 chr15 8911157 8911178 -94583796 + AT_rich Low_complexity Low_complexity 1 21 0 7 652 1065 287 19 19 chr15 8911191 8911557 -94583417 - L1M2 LINE L1 -509 5788 5423 7 652 377 238 107 12 chr15 8911566 8911768 -94583206 + L1M2 LINE L1 5208 5429 -871 7 652 2233 128 57 23 chr15 8912224 8912577 -94582397 + Lx4A LINE L1 6693 7057 -1 7 81 2761 165 4 31 chr15 8912591 8913080 -94581894 - Lx LINE L1 -232 6422 5947 7 653 1260 106 28 14 chr15 8913081 8913292 -94581682 + Lx LINE L1 6439 6652 -2 7 653 3347 60 8 2 chr15 8913688 8914086 -94580888 - MTB LTR MaLR 0 400 1 7 653 490 292 212 30 chr15 8914639 8915006 -94579968 + Lx8 LINE L1 7002 7435 -38 7 653 324 57 132 0 chr15 8915014 8915067 -94579907 + B1_Mur4 SINE Alu 1 60 -90 7 653 342 107 0 0 chr15 8915082 8915138 -94579836 + (GA)n Simple_repeat Simple_repeat 2 57 0 7 653 704 104 0 0 chr15 8915170 8915266 -94579708 + B1_Mm SINE Alu 39 134 -13 7 653 221 0 0 33 chr15 8915268 8915298 -94579676 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 653 825 261 102 26 chr15 8915697 8915961 -94579013 + B4A SINE B4 1 284 -8 7 653 228 182 0 0 chr15 8915985 8916029 -94578945 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 653 3340 55 142 0 chr15 8916038 8916454 -94578520 - MT2C_Mm LTR ERVL 0 475 1 7 653 205 327 10 29 chr15 8916952 8917056 -94577918 + (TG)n Simple_repeat Simple_repeat 1 102 0 7 653 272 244 60 12 chr15 8920132 8920215 -94574759 - L1M5 LINE L1 -615 5509 5423 7 653 341 159 0 61 chr15 8920739 8920853 -94574121 + CT-rich Low_complexity Low_complexity 1 107 0 7 653 208 273 36 16 chr15 8921529 8921610 -94573364 - MIRc SINE MIR -26 242 150 7 653 183 80 0 0 chr15 8921678 8921703 -94573271 + (ATG)n Simple_repeat Simple_repeat 1 25 0 7 653 303 286 36 0 chr15 8921723 8921807 -94573167 - MLT2B4 LTR ERVL -328 228 142 7 653 986 349 111 43 chr15 8922161 8922853 -94572121 - MER21B LTR ERV1 -111 752 14 7 653 790 175 14 0 chr15 8922938 8923081 -94571893 + Lx7 LINE L1 7552 7696 0 7 653 304 309 80 0 chr15 8923839 8924001 -94570973 + L1MB2 LINE L1 5996 6170 -1 7 653 336 275 112 70 chr15 8924164 8924449 -94570525 + L1MD LINE L1 3923 4219 -1927 7 653 409 204 53 11 chr15 8924638 8924732 -94570242 + B4A SINE B4 1 98 -194 7 653 420 242 11 11 chr15 8924763 8924943 -94570031 + (TA)n Simple_repeat Simple_repeat 1 180 0 7 653 420 20 0 0 chr15 8924993 8925042 -94569932 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 653 291 169 262 12 chr15 8925042 8925126 -94569848 + B4A SINE B4 113 217 -75 7 653 437 0 19 0 chr15 8925135 8925188 -94569786 + (TC)n Simple_repeat Simple_repeat 2 55 0 7 653 389 53 0 18 chr15 8925188 8925244 -94569730 + (TG)n Simple_repeat Simple_repeat 1 56 0 7 653 464 258 108 46 chr15 8925256 8925386 -94569588 - RSINE1 SINE B4 -17 148 11 7 653 351 293 172 36 chr15 8925396 8925876 -94569098 + L1ME2 LINE L1 4849 5390 -756 7 653 266 245 9 93 chr15 8926188 8926296 -94568678 + MTEa LTR MaLR 278 376 -3 7 653 240 238 161 12 chr15 8926350 8926431 -94568543 + L1ME2 LINE L1 5544 5636 -528 7 653 676 316 63 26 chr15 8926467 8926815 -94568159 + L1ME2 LINE L1 5745 6105 -59 7 653 3121 155 31 20 chr15 8926876 8927439 -94567535 - RLTR17 LTR ERVK -139 553 1 7 653 28 0 0 0 chr15 8927983 8928011 -94566963 + AT_rich Low_complexity Low_complexity 1 28 0 7 653 243 234 63 11 chr15 8928570 8928665 -94566309 - MER44B DNA MER2_type -107 443 344 7 653 402 171 26 0 chr15 8928714 8928790 -94566184 + PB1D10 SINE Alu 33 110 -7 7 653 2701 84 84 5 chr15 8928915 8929296 -94565678 + IAPLTR2a LTR ERVK 1 411 0 7 653 183 237 0 0 chr15 8929408 8929446 -94565528 - L2 LINE L2 -524 2895 2858 7 653 977 319 126 32 chr15 8929468 8929967 -94565007 - LTR82A LTR ERVL -8 864 319 7 653 421 336 139 57 chr15 8929967 8930064 -94564910 - LTR82B Low_complexity ERVL -8 822 178 7 653 204 302 48 0 chr15 8930550 8930613 -94564361 - MIRb SINE MIR -12 256 191 7 653 225 0 0 0 chr15 8931131 8931156 -94563818 + (CTG)n Simple_repeat Simple_repeat 1 25 0 7 653 352 261 68 82 chr15 8931599 8931745 -94563229 + B1F SINE Alu 5 148 -1 7 653 855 149 17 21 chr15 8931746 8931984 -94562990 + GA-rich Low_complexity Low_complexity 1 236 0 7 653 2659 77 3 6 chr15 8932399 8932726 -94562248 - ORR1A2 LTR MaLR -1 326 1 7 653 23 54 0 0 chr15 8932889 8932926 -94562048 + AT_rich Low_complexity Low_complexity 1 37 0 7 653 32744 68 13 82 chr15 8933136 8939504 -94555470 + L1Md_F2 LINE L1 626 6524 -58 7 653 806 56 9 0 chr15 8939515 8939623 -94555351 + (GAAAA)n Simple_repeat Simple_repeat 2 110 0 7 653 360 230 40 0 chr15 8939638 8939712 -94555262 + ID4_ SINE ID 1 77 -6 7 653 675 54 0 0 chr15 8939991 8940083 -94554891 + (GA)n Simple_repeat Simple_repeat 1 92 0 7 653 705 269 0 20 chr15 8940169 8940317 -94554657 + RSINE1 SINE B4 2 146 -19 7 653 384 306 38 60 chr15 8940317 8940501 -94554473 + L1MB3 LINE L1 6001 6180 -3 7 653 422 270 140 21 chr15 8942281 8942474 -94552500 - MIRb SINE MIR -19 249 34 7 653 29 47 0 0 chr15 8942823 8942866 -94552108 + AT_rich Low_complexity Low_complexity 1 43 0 7 653 26 30 0 0 chr15 8942931 8942964 -94552010 + AT_rich Low_complexity Low_complexity 1 33 0 7 653 3148 58 50 2 chr15 8942964 8943364 -94551610 - Lx3_Mus LINE L1 0 7009 6591 7 653 2821 217 65 93 chr15 8943379 8943676 -94551298 - Lx7 LINE L1 -23 7673 7393 7 653 814 146 91 28 chr15 8943676 8943852 -94551122 + B2_Mm2 SINE B2 1 187 -8 7 653 2797 217 65 93 chr15 8943852 8944480 -94550494 - Lx7 LINE L1 -304 7392 6774 7 653 264 59 0 0 chr15 8944480 8944514 -94550460 + (A)n Simple_repeat Simple_repeat 1 34 0 7 653 1089 102 12 0 chr15 8946334 8946501 -94548473 + B2_Mm1t SINE B2 11 179 -14 7 653 264 114 0 43 chr15 8946533 8946579 -94548395 + B2_Mm2 SINE B2 47 90 -105 7 653 270 0 0 0 chr15 8946579 8946609 -94548365 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 7 653 198 0 0 0 chr15 8946802 8946824 -94548150 + (GA)n Simple_repeat Simple_repeat 2 23 0 7 653 311 148 0 0 chr15 8947190 8947244 -94547730 + ORR1C1 LTR MaLR 1 54 -324 7 653 534 129 0 0 chr15 8947244 8947329 -94547645 + (GGAA)n Simple_repeat Simple_repeat 3 87 0 7 653 3191 33 33 7 chr15 8947396 8947821 -94547153 + RLTR10C LTR ERVK 1 436 0 7 653 1288 27 0 0 chr15 8948035 8948181 -94546793 + B1_Mus2 SINE Alu 2 147 0 7 653 1337 99 16 5 chr15 8948452 8948644 -94546330 - B2_Mm2 SINE B2 0 195 2 7 653 764 200 184 0 chr15 8948741 8948807 -94546167 - URR1B DNA MER1_type 0 225 160 7 653 378 0 0 0 chr15 8948807 8948849 -94546125 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 653 764 200 184 0 chr15 8948849 8948972 -94546002 - URR1B DNA MER1_type -66 159 3 7 653 276 114 0 0 chr15 8949012 8949056 -94545918 + URR1B DNA MER1_type 182 225 0 7 653 414 206 114 10 chr15 8949148 8949276 -94545698 - ORR1D1 LTR MaLR 0 374 188 7 653 234 136 0 0 chr15 8949309 8949353 -94545621 + (GGGA)n Simple_repeat Simple_repeat 3 46 0 7 653 983 192 14 14 chr15 8949401 8949612 -94545362 - ORR1C2 LTR MaLR 0 384 174 7 653 393 231 0 0 chr15 8949663 8949836 -94545138 + GA-rich Low_complexity Low_complexity 2 174 0 7 653 838 212 11 0 chr15 8949836 8950015 -94544959 - ORR1C2 LTR MaLR -193 181 1 7 653 180 0 0 0 chr15 8951052 8951072 -94543902 + (A)n Simple_repeat Simple_repeat 1 20 0 7 653 21 0 0 0 chr15 8951539 8951560 -94543414 + AT_rich Low_complexity Low_complexity 1 21 0 7 653 201 328 0 16 chr15 8951794 8951856 -94543118 + L2a LINE L2 3365 3425 -1 7 653 726 95 53 12 chr15 8952860 8953030 -94541944 + (TCTA)n Simple_repeat Simple_repeat 1 177 0 7 653 1625 242 49 68 chr15 8953322 8953387 -94541587 + L1MB4 LINE L1 5348 5416 -764 7 653 4304 64 16 0 chr15 8953387 8953931 -94541043 - L1_Mus4 LINE L1 -1 6635 6083 7 653 4262 72 1 30 chr15 8953931 8954385 -94540589 + L1_Mus4 LINE L1 5388 5837 -799 7 653 1336 108 5 20 chr15 8954385 8954583 -94540391 + B2_Mm2 SINE B2 1 195 0 8 653 4262 50 2 30 chr15 8954583 8954867 -94540107 + L1_Mus4 LINE L1 5838 6111 -525 7 653 1266 219 72 67 chr15 8955197 8955584 -94539390 - MTD LTR MaLR -13 406 18 8 653 234 62 0 0 chr15 8956033 8956065 -94538909 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 8 653 189 0 0 0 chr15 8956067 8956088 -94538886 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 8 653 1250 39 27 0 chr15 8956224 8956741 -94538233 + (TCCA)n Simple_repeat Simple_repeat 1 531 0 8 653 1179 38 34 0 chr15 8956758 8956998 -94537976 + (TCCA)n Simple_repeat Simple_repeat 1 248 0 8 653 21 0 0 0 chr15 8957259 8957280 -94537694 + AT_rich Low_complexity Low_complexity 1 21 0 8 653 243 250 109 0 chr15 8957938 8958002 -94536972 + tRNA-Ala-GCA tRNA tRNA 1 71 -4 8 653 213 94 0 0 chr15 8958094 8958126 -94536848 + (TCCA)n Simple_repeat Simple_repeat 3 34 0 8 653 1373 273 24 24 chr15 8958227 8958606 -94536368 + MTEa LTR MaLR 1 379 0 8 653 1200 279 56 59 chr15 8958606 8959167 -94535807 + Tigger7 DNA MER2_type 2 612 -93 8 653 207 0 0 0 chr15 8959167 8959190 -94535784 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 653 623 299 156 47 chr15 8959190 8959263 -94535711 + MER44D DNA MER2_type 613 704 -1 8 653 232 312 72 10 chr15 8959550 8959647 -94535327 + RLTR12B LTR ERVK 117 219 -309 8 653 214 309 9 93 chr15 8959961 8960068 -94534906 + B3A SINE B2 27 124 -74 8 653 4002 55 2 62 chr15 8960071 8960263 -94534711 - RLTR1B LTR ERV1 0 512 321 8 653 468 0 0 0 chr15 8960263 8960315 -94534659 + (CTGGGG)n Simple_repeat Simple_repeat 1 52 0 8 653 4002 55 2 62 chr15 8960315 8960667 -94534307 - RLTR1B LTR ERV1 -192 320 1 8 653 1156 61 0 0 chr15 8960983 8961131 -94533843 + B1_Mus1 SINE Alu 1 148 0 8 653 414 0 0 0 chr15 8961253 8961299 -94533675 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 653 1188 68 0 0 chr15 8961365 8961512 -94533462 - B1_Mus2 SINE Alu 0 147 1 8 653 259 248 80 71 chr15 8964109 8964222 -94530752 - MIRb SINE MIR -63 199 86 8 653 229 296 74 0 chr15 8964605 8964686 -94530288 + MIR SINE MIR 85 171 -91 8 653 2512 109 142 19 chr15 8964723 8965152 -94529822 + RLTR45 LTR ERVK 1 482 0 8 653 1671 139 64 174 chr15 8965451 8965859 -94529115 - ORR1B2 LTR MaLR -4 363 1 8 653 243 0 0 0 chr15 8966359 8966386 -94528588 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 8 653 1159 62 0 7 chr15 8966471 8966618 -94528356 - B1_Mus1 SINE Alu 0 148 3 8 653 564 264 109 33 chr15 8966632 8966816 -94528158 - B3A SINE B2 0 198 1 8 653 23 54 0 0 chr15 8967085 8967122 -94527852 + AT_rich Low_complexity Low_complexity 1 37 0 8 653 586 247 99 10 chr15 8967139 8967331 -94527643 - B3 SINE B2 -6 210 2 8 653 227 281 140 40 chr15 8967455 8967555 -94527419 - PB1D10 SINE Alu -7 110 1 8 653 1005 79 0 0 chr15 8967879 8968019 -94526955 + B2_Mm2 SINE B2 2 141 -54 8 653 307 162 57 29 chr15 8968031 8968101 -94526873 + RLTR25B LTR ERVK 501 572 -531 8 653 774 20 0 0 chr15 8968047 8968145 -94526829 + B1_Mus2 SINE Alu 45 142 -5 8 653 453 151 0 0 chr15 8968150 8968236 -94526738 + A-rich Low_complexity Low_complexity 1 86 0 8 653 1557 47 11 0 chr15 8968238 8968428 -94526546 + B2_Mm1a SINE B2 2 193 0 8 653 246 100 39 20 chr15 8969497 8969532 -94525442 - MTEb LTR MaLR -3 376 341 8 653 1986 62 53 101 chr15 8969532 8969870 -94525104 - L1_Mus2 LINE L1 0 6566 6245 8 653 246 100 39 20 chr15 8969870 8969885 -94525089 - MTEb LTR MaLR -39 340 325 8 653 288 244 116 0 chr15 8969887 8969973 -94525001 + B1_Mus2 SINE Alu 52 147 0 8 653 1375 206 146 13 chr15 8970049 8970433 -94524541 + RLTR25B LTR ERVK 594 1028 0 8 653 1617 137 72 36 chr15 8970668 8971001 -94523973 - ORR1D1 LTR MaLR -5 369 25 8 653 294 200 29 58 chr15 8971194 8971263 -94523711 - RMER13A LTR ERVK -227 681 615 8 653 243 0 0 0 chr15 8971278 8971305 -94523669 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 8 653 986 201 168 28 chr15 8971315 8971655 -94523319 - RMER13A LTR ERVK -387 521 96 8 653 242 344 44 23 chr15 8971838 8972094 -94522880 - L1MB7 LINE L1 -8 6166 5901 8 653 299 238 147 10 chr15 8972315 8972417 -94522557 - PB1D10 SINE Alu -1 116 1 8 653 677 87 16 16 chr15 8972770 8972898 -94522076 + L1_Mus3 LINE L1 6511 6638 0 8 653 900 238 33 40 chr15 8973393 8973669 -94521305 + B4 SINE B4 2 275 -17 8 653 423 0 0 0 chr15 8973672 8973719 -94521255 + (CA)n Simple_repeat Simple_repeat 1 47 0 8 653 2886 97 60 22 chr15 8973788 8974252 -94520722 + RLTR45 LTR ERVK 1 482 0 8 653 257 197 13 0 chr15 8974910 8974986 -94519988 + CT-rich Low_complexity Low_complexity 2 78 0 8 653 227 303 14 43 chr15 8975062 8975131 -94519843 - MLT1J1 LTR MaLR -334 110 44 8 653 1839 294 67 10 chr15 8975333 8975958 -94519016 + Lx8 LINE L1 6325 6985 -488 8 653 3666 73 39 23 chr15 8975961 8976532 -94518442 - RLTR13D1 LTR ERVK 0 806 227 8 653 2689 160 33 28 chr15 8976505 8977045 -94517929 - RLTR13D1 LTR ERVK -359 543 1 8 653 707 336 47 19 chr15 8977045 8977406 -94517568 + Lx8 LINE L1 6951 7321 -152 8 653 183 293 80 0 chr15 8977551 8977626 -94517348 - MIRm SINE MIR -36 240 160 8 653 278 132 19 0 chr15 8978295 8978348 -94516626 + (CAT)n Simple_repeat Simple_repeat 3 56 0 8 653 1170 75 0 0 chr15 8978569 8978716 -94516258 + B1_Mus1 SINE Alu 2 148 0 8 653 207 0 0 0 chr15 8978719 8978742 -94516232 + (A)n Simple_repeat Simple_repeat 1 23 0 8 653 322 62 0 0 chr15 8984528 8984576 -94510398 - RLTR1B LTR ERV1 -464 48 1 8 653 619 201 102 42 chr15 8984590 8984756 -94510218 - RMER16 LTR ERVK -251 282 107 8 653 627 248 19 6 chr15 8984848 8985010 -94509964 + RSINE1 SINE B4 2 165 0 8 653 400 259 142 7 chr15 8985592 8985740 -94509234 - B3 SINE B2 0 216 49 8 653 3376 48 104 1 chr15 8985740 8986509 -94508465 + L1_Mus1 LINE L1 5718 6565 -2 8 653 282 242 0 0 chr15 8986528 8986590 -94508384 - B3 SINE B2 -154 62 1 8 653 405 0 0 0 chr15 8986993 8987038 -94507936 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 653 228 200 0 0 chr15 8987205 8987265 -94507709 + (TG)n Simple_repeat Simple_repeat 1 60 0 8 653 219 278 37 0 chr15 8987313 8987367 -94507607 - PB1D10 SINE Alu -36 81 26 8 653 288 0 0 0 chr15 8988078 8988110 -94506864 + (TATG)n Simple_repeat Simple_repeat 4 35 0 8 653 21 0 0 0 chr15 8989428 8989449 -94505525 + AT_rich Low_complexity Low_complexity 1 21 0 8 653 755 123 149 36 chr15 8989715 8989883 -94505091 - B2_Mm2 SINE B2 -7 188 2 8 653 1272 73 62 0 chr15 8990031 8990209 -94504765 - B2_Mm2 SINE B2 -4 191 3 8 653 24 67 0 0 chr15 8990240 8990285 -94504689 + AT_rich Low_complexity Low_complexity 1 45 0 8 653 345 47 0 0 chr15 8993338 8993381 -94501593 + (A)n Simple_repeat Simple_repeat 1 43 0 8 653 22 35 0 0 chr15 8993696 8993725 -94501249 + AT_rich Low_complexity Low_complexity 1 29 0 8 653 349 335 12 42 chr15 8994307 8994472 -94500502 + RSINE1 SINE B4 5 164 -1 8 653 22 0 0 0 chr15 8994685 8994707 -94500267 + AT_rich Low_complexity Low_complexity 1 22 0 8 653 1173 48 0 40 chr15 8996553 8996705 -94498269 - B1_Mus2 SINE Alu -1 146 1 8 653 983 226 177 0 chr15 8997097 8997402 -94497572 - ORR1D2 LTR MaLR -11 359 1 8 653 281 315 166 14 chr15 8998735 8998880 -94496094 - MIRb SINE MIR -89 179 13 8 653 537 55 0 0 chr15 8999260 8999333 -94495641 - URR1B DNA MER1_type 0 225 153 8 653 1197 94 0 42 chr15 8999335 8999524 -94495450 + L1_Mus1 LINE L1 6387 6567 0 8 653 180 0 0 0 chr15 8999598 8999618 -94495356 + (A)n Simple_repeat Simple_repeat 1 20 0 8 653 291 214 14 0 chr15 8999619 8999689 -94495285 - URR1B DNA MER1_type -97 128 58 8 653 261 0 0 0 chr15 9002904 9002933 -94492041 + (T)n Simple_repeat Simple_repeat 1 29 0 1 653 297 0 0 0 chr15 9004408 9004441 -94490533 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 653 315 147 28 42 chr15 9006044 9006115 -94488859 - ID4 SINE ID -11 72 3 3 653 216 0 0 0 chr15 9006135 9006159 -94488815 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 653 306 239 137 0 chr15 9006280 9006397 -94488577 + RSINE1 SINE B4 12 144 -21 5 653 352 271 51 0 chr15 9006553 9006671 -94488303 - RSINE1 SINE B4 -41 124 1 6 653 638 329 24 16 chr15 9007054 9007307 -94487667 - B4A SINE B4 -23 269 15 7 653 288 137 0 0 chr15 9007321 9007372 -94487602 + (TATG)n Simple_repeat Simple_repeat 1 51 0 8 653 283 316 44 44 chr15 9007768 9007927 -94487047 - RSINE1 SINE B4 -5 160 2 9 653 267 31 0 0 chr15 9010849 9010881 -94484093 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1 653 701 53 0 0 chr15 9011730 9011825 -94483149 - B2_Mm2 SINE B2 -100 95 1 1 653 23 0 0 0 chr15 9012923 9012946 -94482028 + AT_rich Low_complexity Low_complexity 1 23 0 1 653 240 35 0 0 chr15 9013800 9013829 -94481145 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1 653 1271 34 0 0 chr15 9014241 9014388 -94480586 - B1_Mus2 SINE Alu 0 147 1 1 653 325 213 47 0 chr15 9014775 9014944 -94480030 + (CACAG)n Simple_repeat Simple_repeat 1 177 0 1 653 337 204 48 0 chr15 9014986 9015153 -94479821 + (CACAG)n Simple_repeat Simple_repeat 3 177 0 1 653 277 191 45 0 chr15 9015176 9015286 -94479688 + (CACAG)n Simple_repeat Simple_repeat 3 117 0 1 653 540 303 103 41 chr15 9017655 9018023 -94476951 - Lx8 LINE L1 -5 7468 7078 1 653 299 333 112 21 chr15 9019449 9019636 -94475338 + MLT1F LTR MaLR 211 414 -134 1 653 207 146 0 0 chr15 9019820 9019861 -94475113 + (A)n Simple_repeat Simple_repeat 1 41 0 1 653 628 302 5 64 chr15 9020152 9020354 -94474620 - B3A SINE B2 0 198 9 1 653 906 119 0 0 chr15 9021631 9021774 -94473200 + (TCC)n Simple_repeat Simple_repeat 2 144 0 2 653 377 229 8 22 chr15 9022081 9022215 -94472759 + CT-rich Low_complexity Low_complexity 1 132 0 2 653 729 159 42 28 chr15 9022215 9022357 -94472617 - B1_Mur2 SINE Alu -1 148 5 2 653 773 203 97 20 chr15 9022703 9022899 -94472075 - RLTR11A LTR ERVK -308 220 10 2 653 1733 196 50 29 chr15 9022912 9023328 -94471646 - MYSERV-int LTR ERVK -3 6547 6123 2 653 1299 147 156 11 chr15 9023338 9023614 -94471360 - ORR1B1 LTR MaLR -73 321 6 2 653 289 361 87 0 chr15 9023784 9023995 -94470979 - MLT1F1 LTR MaLR -11 558 328 2 653 1502 130 41 107 chr15 9023995 9024340 -94470634 - RLTRETN_Mm LTR ERVK 0 322 1 2 653 289 361 87 0 chr15 9024340 9024358 -94470616 - MLT1F1 LTR MaLR -242 327 310 2 653 450 0 0 0 chr15 9025016 9025066 -94469908 + (TCCCC)n Simple_repeat Simple_repeat 5 54 0 2 653 1344 185 170 6 chr15 9025121 9025479 -94469495 - Lx9 LINE L1 -43 7601 7185 2 653 245 215 15 15 chr15 9026283 9026349 -94468625 + CT-rich Low_complexity Low_complexity 3 68 0 2 653 450 0 0 0 chr15 9026367 9026417 -94468557 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 653 426 39 0 0 chr15 9026417 9026468 -94468506 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 653 325 253 13 0 chr15 9026855 9026930 -94468044 + ID4_ SINE ID 2 77 -6 3 653 268 43 43 21 chr15 9027469 9027516 -94467458 + Lx5 LINE L1 7003 7050 0 3 653 197 352 71 8 chr15 9028249 9028375 -94466599 - MIRb SINE MIR -64 204 71 3 653 1292 27 0 0 chr15 9029319 9029466 -94465508 + B1_Mm SINE Alu 1 147 0 3 653 480 228 26 17 chr15 9030914 9031030 -94463944 + PB1D10 SINE Alu 1 117 0 3 653 475 322 55 14 chr15 9031269 9031414 -94463560 + RSINE1 SINE B4 3 153 -12 3 653 273 257 151 69 chr15 9031839 9031998 -94462976 - MLT1J2 LTR MaLR -8 440 269 3 653 368 20 0 0 chr15 9032362 9032412 -94462562 - B1_Mm SINE Alu 0 147 98 3 653 305 238 0 96 chr15 9032867 9033034 -94461940 + (TTGTG)n Simple_repeat Simple_repeat 5 155 0 4 653 207 0 0 0 chr15 9033320 9033343 -94461631 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 653 213 301 71 103 chr15 9033356 9033482 -94461492 - RSINE1 SINE B4 -36 129 8 4 653 1400 75 38 0 chr15 9034924 9035110 -94459864 - B2_Mm1a SINE B2 0 193 1 4 653 4039 160 53 70 chr15 9035160 9035801 -94459173 - RMER12 LTR ERVK 0 1404 388 4 653 1238 34 14 0 chr15 9035801 9035947 -94459027 - B1_Mus1 SINE Alu 0 148 1 4 653 4039 134 44 48 chr15 9035947 9036255 -94458719 - RMER12 LTR ERVK -935 387 69 4 653 228 311 0 0 chr15 9037159 9037220 -94457754 + (CATATA)n Simple_repeat Simple_repeat 3 63 0 4 653 242 164 18 0 chr15 9037248 9037303 -94457671 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 653 289 272 90 149 chr15 9040284 9040552 -94454422 + B4A SINE B4 1 252 -40 4 653 249 314 35 0 chr15 9040788 9040874 -94454100 + PB1D10 SINE Alu 23 111 -6 4 653 268 250 43 54 chr15 9041087 9041180 -94453794 + PB1D9 SINE Alu 3 94 -26 5 653 227 320 9 46 chr15 9041180 9041194 -94453780 + ID_B1 SINE B4 84 186 -38 5 653 37 23 0 0 chr15 9043888 9043932 -94451042 + AT_rich Low_complexity Low_complexity 1 44 0 5 654 470 214 23 38 chr15 9047423 9047554 -94447420 + B1F2 SINE Alu 20 148 -1 5 654 1149 62 0 7 chr15 9047646 9047793 -94447181 + B1_Mus1 SINE Alu 2 147 -1 5 654 228 323 158 48 chr15 9048317 9048778 -94446196 + L2 LINE L2 2330 2841 -578 5 654 502 248 205 5 chr15 9050132 9050327 -94444647 - MER2 DNA MER2_type -110 235 2 5 654 574 42 150 0 chr15 9050394 9050492 -94444482 + B1_Mus1 SINE Alu 3 119 -1 5 654 216 111 0 45 chr15 9050493 9050559 -94444415 + A-rich Low_complexity Low_complexity 4 66 0 5 654 227 139 0 0 chr15 9050568 9050604 -94444370 + B4A SINE B4 1 36 -256 5 654 375 221 0 0 chr15 9050722 9050797 -94444177 + B4A SINE B4 157 231 -61 5 654 347 310 47 32 chr15 9050797 9050987 -94443987 + B3A SINE B2 2 194 -4 6 654 405 0 0 0 chr15 9051048 9051093 -94443881 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 654 1275 97 11 0 chr15 9052201 9052376 -94442598 + B2_Mm1t SINE B2 3 179 -14 6 654 452 84 324 36 chr15 9052444 9052555 -94442419 + B2_Mm2 SINE B2 47 189 -6 6 654 226 337 24 0 chr15 9052788 9052871 -94442103 + MIR SINE MIR 48 132 -130 6 654 189 324 27 0 chr15 9054121 9054195 -94440779 - L2 LINE L2 -901 2518 2443 6 654 1527 54 0 5 chr15 9055266 9055453 -94439521 + B2_Mm2 SINE B2 2 187 -8 6 654 422 260 53 53 chr15 9056611 9056798 -94438176 + L1MA9 LINE L1 6093 6279 -33 6 654 234 191 87 14 chr15 9056920 9056989 -94437985 + ID4 SINE ID 4 77 -6 6 654 1092 254 44 39 chr15 9057891 9058255 -94436719 + ORR1D2 LTR MaLR 1 366 -4 6 654 360 64 0 0 chr15 9058444 9058491 -94436483 + (TCCC)n Simple_repeat Simple_repeat 4 50 0 7 654 902 152 14 14 chr15 9058532 9058672 -94436302 - B1_Mur4 SINE Alu -10 140 1 7 654 1177 41 14 20 chr15 9059143 9059291 -94435683 - B1_Mm SINE Alu 0 147 1 7 654 1094 44 44 7 chr15 9059682 9059818 -94435156 - B1_Mus2 SINE Alu -5 142 2 7 654 231 317 120 19 chr15 9060622 9060795 -94434179 + MIRb SINE MIR 50 233 -29 7 654 319 276 118 41 chr15 9061033 9061203 -94433771 - LTR16C LTR ERVL -80 409 227 7 654 491 0 0 59 chr15 9062167 9062235 -94432739 + (TA)n Simple_repeat Simple_repeat 2 65 0 7 654 333 0 0 0 chr15 9062255 9062292 -94432682 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 654 197 372 15 44 chr15 9062292 9062427 -94432547 - MIRb SINE MIR -104 164 34 7 654 327 263 254 0 chr15 9063171 9063289 -94431685 - B3 SINE B2 -68 148 1 7 654 211 309 73 0 chr15 9063690 9063758 -94431216 + L2a LINE L2 3310 3382 -44 8 654 1007 133 57 17 chr15 9063814 9063990 -94430984 - B2_Mm2 SINE B2 -11 184 2 8 654 306 270 111 51 chr15 9063993 9064110 -94430864 + B1F2 SINE Alu 26 149 0 8 654 195 129 0 0 chr15 9064236 9064267 -94430707 + (CTG)n Simple_repeat Simple_repeat 2 32 0 8 654 213 318 90 9 chr15 9064312 9064423 -94430551 - RSINE1 SINE B4 -37 128 9 8 654 1210 88 0 0 chr15 9065462 9065609 -94429365 - B1_Mus1 SINE Alu 0 148 2 8 654 378 263 29 0 chr15 9065650 9065742 -94429232 + B1F SINE Alu 20 115 -5 8 654 268 308 141 37 chr15 9065755 9065890 -94429084 + B1F SINE Alu 1 149 0 8 654 729 167 78 28 chr15 9065893 9066035 -94428939 + B1_Mur3 SINE Alu 1 149 0 8 654 531 267 85 20 chr15 9066677 9066865 -94428109 - MIRb SINE MIR -40 228 34 8 654 275 280 54 36 chr15 9066902 9067013 -94427961 - PB1D10 SINE Alu -3 114 2 9 654 674 236 7 7 chr15 9067087 9067228 -94427746 - B1_Mur2 SINE Alu 0 149 9 9 654 501 134 148 70 chr15 9067553 9067681 -94427293 + B1_Mus1 SINE Alu 1 138 -10 9 654 227 315 173 44 chr15 9067752 9068157 -94426817 + L2a LINE L2 2962 3418 -8 9 654 1120 53 45 0 chr15 9068162 9068295 -94426679 - B1_Mus1 SINE Alu -8 140 2 9 654 212 282 38 13 chr15 9068514 9068593 -94426381 - L2 LINE L2 -654 2765 2685 9 654 225 0 0 0 chr15 9070264 9070289 -94424685 + (GGA)n Simple_repeat Simple_repeat 3 27 0 9 654 1287 42 0 0 chr15 9071859 9072003 -94422971 - B1_Mus1 SINE Alu -1 147 4 9 654 242 284 156 7 chr15 9073458 9073593 -94421381 - L1MCc LINE L1 -6120 303 149 9 654 185 161 0 0 chr15 9074148 9074179 -94420795 - L2 LINE L2 -603 2816 2786 9 654 1380 144 14 104 chr15 9074834 9075113 -94419861 - ORR1A2 LTR MaLR 0 394 141 1 654 824 71 9 9 chr15 9075104 9075218 -94419756 - ORR1A2-int LTR MaLR -190 1602 1489 1 654 599 208 0 118 chr15 9075211 9075347 -94419627 - MT2B LTR ERVL -325 276 157 1 654 2792 148 74 34 chr15 9075340 9075878 -94419096 - ORR1A2-int LTR MaLR -1403 560 1 1 654 2221 111 65 3 chr15 9075878 9076186 -94418788 - ORR1A2 LTR MaLR 0 327 1 1 654 220 242 206 112 chr15 9076246 9076353 -94418621 + B1F2 SINE Alu 1 117 0 1 654 443 303 37 0 chr15 9076364 9076473 -94418501 + B1F SINE Alu 29 141 -8 1 654 189 51 50 25 chr15 9076650 9076690 -94418284 + (TAA)n Simple_repeat Simple_repeat 1 41 0 1 654 693 201 62 28 chr15 9077012 9077191 -94417783 + Lx7 LINE L1 7167 7351 -345 1 654 395 222 106 98 chr15 9077203 9077448 -94417526 + Lx7 LINE L1 7445 7691 -5 1 654 2786 141 26 157 chr15 9077517 9078124 -94416850 - RLTR12B LTR ERVK 0 528 1 1 654 24 0 0 0 chr15 9078148 9078172 -94416802 + AT_rich Low_complexity Low_complexity 1 24 0 1 654 466 204 72 27 chr15 9078216 9078327 -94416647 - PB1D10 SINE Alu 0 117 2 1 654 1355 120 11 0 chr15 9078372 9078563 -94416411 + B2_Mm2 SINE B2 1 193 -2 1 654 282 267 305 0 chr15 9079699 9079731 -94415243 + B1F2 SINE Alu 6 142 -7 1 654 320 247 68 0 chr15 9079731 9079804 -94415170 + ID_B1 SINE B4 140 217 -7 1 654 589 256 0 33 chr15 9079886 9080007 -94414967 + B3A SINE B2 1 117 -81 1 654 342 0 0 0 chr15 9080023 9080061 -94414913 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 654 601 305 137 27 chr15 9080253 9080516 -94414458 + B4 SINE B4 1 292 0 1 654 2180 297 72 35 chr15 9081787 9081909 -94413065 - Lx9 LINE L1 -215 7429 7307 1 654 1320 143 75 9 chr15 9081909 9082121 -94412853 + URR1A DNA MER1_type 1 226 0 1 654 2180 297 72 35 chr15 9082121 9082882 -94412092 - Lx9 LINE L1 -338 7306 6513 1 654 1548 69 37 0 chr15 9083627 9083815 -94411159 + B2_Mm2 SINE B2 1 195 0 1 654 325 290 52 37 chr15 9084030 9084166 -94410808 - L1ME3 LINE L1 -120 6042 5905 1 654 225 0 0 0 chr15 9084166 9084191 -94410783 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 1 654 618 51 0 0 chr15 9084192 9084270 -94410704 + (TC)n Simple_repeat Simple_repeat 1 78 0 1 654 268 333 58 40 chr15 9084491 9084816 -94410158 + L2 LINE L2 2045 2375 -1044 1 654 1735 177 29 63 chr15 9084895 9085245 -94409729 - ORR1C1 LTR MaLR 0 378 41 1 654 356 240 75 19 chr15 9085571 9085677 -94409297 - PB1D7 SINE Alu -7 113 2 1 654 38 22 0 0 chr15 9086342 9086387 -94408587 + AT_rich Low_complexity Low_complexity 1 45 0 1 654 27 73 0 0 chr15 9086882 9086937 -94408037 + AT_rich Low_complexity Low_complexity 1 55 0 1 654 750 241 132 0 chr15 9087238 9087503 -94407471 - Tigger2b DNA MER2_type -425 301 2 1 654 298 252 85 25 chr15 9087503 9087621 -94407353 - MIRb SINE MIR -77 191 67 1 654 266 344 62 23 chr15 9087652 9087780 -94407194 - MER58B DNA MER1_type -23 318 186 1 654 471 254 70 9 chr15 9087945 9088060 -94406914 - MLT1C LTR MaLR -15 452 331 1 654 393 102 0 0 chr15 9088407 9088466 -94406508 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 1 654 279 216 73 66 chr15 9088466 9088563 -94406411 - PB1 SINE Alu -13 114 24 1 654 356 331 29 0 chr15 9088776 9088912 -94406062 + CT-rich Low_complexity Low_complexity 5 144 0 1 654 353 220 193 0 chr15 9089558 9089658 -94405316 + B1F SINE Alu 19 139 -10 1 654 309 26 0 0 chr15 9089658 9089696 -94405278 + (CTAAA)n Simple_repeat Simple_repeat 3 40 0 1 654 276 149 0 0 chr15 9090568 9090615 -94404359 + (TCC)n Simple_repeat Simple_repeat 3 49 0 1 654 886 321 7 10 chr15 9090766 9091059 -94403915 - B4A SINE B4 0 292 1 1 654 660 259 154 18 chr15 9091135 9091469 -94403505 - MTEb LTR MaLR 0 379 1 1 654 3200 278 95 55 chr15 9091471 9092559 -94402415 - MTEb-int LTR MaLR -2 1578 321 1 654 1007 294 92 6 chr15 9092559 9092908 -94402066 + Lx8 LINE L1 7078 7456 -17 1 654 23 0 0 0 chr15 9092964 9092987 -94401987 + AT_rich Low_complexity Low_complexity 1 23 0 1 654 527 330 85 6 chr15 9092990 9093167 -94401807 - MTEb-int LTR MaLR -1225 355 165 1 654 3621 68 92 6 chr15 9093180 9093657 -94401317 + Lx3_Mus LINE L1 6487 7004 -5 1 654 1962 202 152 84 chr15 9093749 9094413 -94400561 - Lx9 LINE L1 -1 7643 6935 1 654 1090 214 5 0 chr15 9094407 9094599 -94400375 - Lx9 LINE L1 -925 6719 6527 1 654 587 243 14 35 chr15 9094615 9094760 -94400214 - Lx9 LINE L1 -1183 6461 6320 1 654 340 261 51 17 chr15 9095984 9096101 -94398873 - Lx2B LINE L1 -1 6999 6879 1 654 5120 169 68 30 chr15 9096101 9097177 -94397797 - Lx4B LINE L1 -298 6760 5644 1 654 2133 137 38 0 chr15 9097365 9097680 -94397294 - ORR1A2 LTR MaLR 0 327 1 1 654 11307 126 81 23 chr15 9097680 9099536 -94395438 - ORR1A2-int LTR MaLR 0 1963 1 1 654 2411 108 3 18 chr15 9099536 9099864 -94395110 - ORR1A2 LTR MaLR -2 325 1 1 654 1749 47 0 0 chr15 9099895 9100088 -94394886 - B2_Mm1t SINE B2 0 193 1 1 654 225 0 0 0 chr15 9100323 9100348 -94394626 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 654 1285 21 7 0 chr15 9100348 9100490 -94394484 - B1_Mus1 SINE Alu -2 146 4 1 654 24 53 0 0 chr15 9100793 9100831 -94394143 + AT_rich Low_complexity Low_complexity 1 38 0 1 654 698 328 64 8 chr15 9101063 9101327 -94393647 + B4A SINE B4 14 292 0 1 654 1072 84 38 0 chr15 9101539 9101670 -94393304 + B1_Mm SINE Alu 2 137 -10 1 654 195 42 0 0 chr15 9101684 9101708 -94393266 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 1 654 2993 44 0 0 chr15 9102034 9102374 -94392600 - L1_Mus1 LINE L1 0 6567 6228 1 654 374 339 171 4 chr15 9102515 9102755 -94392219 - Lx9 LINE L1 -285 7359 7080 1 654 327 296 140 9 chr15 9102814 9103042 -94391932 + Charlie7 DNA MER1_type 584 841 -1771 1 654 29 28 0 0 chr15 9103077 9103113 -94391861 + AT_rich Low_complexity Low_complexity 1 36 0 1 654 511 327 154 40 chr15 9103498 9104055 -94390919 - L2 LINE L2 -2094 1325 705 1 654 236 189 94 0 chr15 9104066 9104119 -94390855 + ID4_ SINE ID 12 69 -14 1 654 709 265 137 63 chr15 9104235 9104790 -94390184 - L1MC4 LINE L1 -134 7908 7313 1 654 1137 88 0 0 chr15 9105893 9106029 -94388945 + B1_Mus2 SINE Alu 2 137 -10 1 654 225 0 0 0 chr15 9106233 9106258 -94388716 + (T)n Simple_repeat Simple_repeat 1 25 0 1 654 1331 27 0 0 chr15 9106258 9106405 -94388569 - B1_Mm SINE Alu 0 147 1 1 654 347 337 92 76 chr15 9106405 9106733 -94388241 - ORR1D2 LTR MaLR -13 357 25 1 654 213 154 0 0 chr15 9107243 9107282 -94387692 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 654 200 133 0 43 chr15 9107758 9107805 -94387169 + (TATATG)n Simple_repeat Simple_repeat 1 45 0 1 654 957 271 84 35 chr15 9108673 9109040 -94385934 + Lx8 LINE L1 7079 7463 -10 1 654 21 57 0 0 chr15 9109156 9109191 -94385783 + AT_rich Low_complexity Low_complexity 1 35 0 1 654 21 89 0 0 chr15 9109313 9109369 -94385605 + AT_rich Low_complexity Low_complexity 1 56 0 1 654 378 327 9 0 chr15 9109376 9109483 -94385491 + PB1D10 SINE Alu 5 112 -5 1 654 306 237 0 84 chr15 9109508 9109591 -94385383 + ID_B1 SINE B4 137 212 -12 1 654 584 29 0 0 chr15 9109523 9109592 -94385382 + B1_Mus2 SINE Alu 68 136 -11 1 654 306 0 0 0 chr15 9109592 9109626 -94385348 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 654 276 149 0 0 chr15 9109730 9109777 -94385197 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1 654 3822 162 79 11 chr15 9109986 9110729 -94384245 - RMER13B LTR ERVK -107 801 8 1 654 216 0 0 0 chr15 9110733 9110757 -94384217 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 654 216 211 58 0 chr15 9110827 9110879 -94384095 + B1F1 SINE Alu 51 105 -44 1 654 859 112 104 0 chr15 9111166 9111291 -94383683 - B1_Mus1 SINE Alu -9 139 2 1 654 349 264 22 72 chr15 9111528 9111667 -94383307 + B1F SINE Alu 18 149 0 1 654 302 157 0 19 chr15 9111746 9111798 -94383176 - B1_Mur4 SINE Alu -95 55 5 1 654 472 229 83 0 chr15 9111940 9112036 -94382938 - PB1D7 SINE Alu 0 120 17 1 654 279 331 107 96 chr15 9112601 9112882 -94382092 - ORR1E LTR MaLR 0 359 76 1 654 182 304 0 0 chr15 9113461 9113517 -94381457 + L3 LINE CR1 4241 4296 -193 1 654 527 207 141 32 chr15 9113840 9114025 -94380949 - B3 SINE B2 -10 206 2 1 654 380 226 157 19 chr15 9114445 9114553 -94380421 - B1_Mur1 SINE Alu -1 148 26 1 654 824 267 95 83 chr15 9114533 9115087 -94379887 - RLTR12B LTR ERVK -27 501 1 1 654 420 177 202 9 chr15 9115188 9115302 -94379672 + B1_Mur1 SINE Alu 11 146 -3 1 654 931 160 126 0 chr15 9115400 9115575 -94379399 + URR1A DNA MER1_type 30 226 0 1 654 382 252 34 34 chr15 9115442 9115590 -94379384 - CYRA11_Mm Unknown Y-chromosome -313 304 157 1 654 1451 56 0 6 chr15 9115595 9115775 -94379199 + B2_Mm2 SINE B2 3 181 -14 1 654 270 239 19 37 chr15 9117449 9117599 -94377375 + L1MCc LINE L1 1416 1536 -4887 1 654 185 315 0 0 chr15 9117748 9117802 -94377172 - L2c LINE L2 -252 3135 3082 1 654 27 0 0 0 chr15 9117994 9118021 -94376953 + AT_rich Low_complexity Low_complexity 1 27 0 1 654 541 313 8 14 chr15 9118181 9118398 -94376576 - Lx7 LINE L1 -378 7318 7116 1 654 4670 103 38 3 chr15 9118577 9119295 -94375679 - L1VL2 LINE L1 -5511 824 82 1 654 243 132 0 0 chr15 9119295 9119333 -94375641 - L1VL2 LINE L1 -6148 187 150 1 654 494 281 87 59 chr15 9119336 9119555 -94375419 - Lx7 LINE L1 -687 7009 6785 1 654 739 209 126 53 chr15 9119571 9119896 -94375078 - RMER4B LTR ERVK -140 471 1 1 654 384 262 51 97 chr15 9119897 9120115 -94374859 - Lx7 LINE L1 -1069 6627 6420 1 654 4334 116 18 46 chr15 9120496 9120821 -94374153 - L1_Mur2 LINE L1 -1350 4527 4192 1 654 189 0 0 0 chr15 9120821 9120842 -94374132 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 654 4334 116 18 46 chr15 9120842 9121052 -94373922 - L1_Mur2 LINE L1 -1686 4191 4011 1 654 1579 57 0 0 chr15 9121052 9121244 -94373730 - B2_Mm1t SINE B2 -1 192 1 1 654 4334 116 18 46 chr15 9121244 9121486 -94373488 - L1_Mur2 LINE L1 -1867 4010 3772 1 654 1382 181 107 32 chr15 9121553 9121794 -94373180 - RLTR40 LTR ERVK -7 810 561 1 654 372 43 0 0 chr15 9121794 9121840 -94373134 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 654 1382 181 107 32 chr15 9121840 9121906 -94373068 - RLTR40 LTR ERVK -257 560 482 1 654 589 206 82 30 chr15 9121911 9122046 -94372928 - B1_Mus1 SINE Alu -1 147 6 2 654 1921 184 147 5 chr15 9122048 9122485 -94372489 - RLTR40 LTR ERVK -318 499 1 1 654 527 266 74 25 chr15 9122569 9122731 -94372243 - B3A SINE B2 -5 193 24 2 654 6539 48 6 4 chr15 9122731 9123572 -94371402 + L1_Mus1 LINE L1 5725 6567 0 2 654 326 279 0 0 chr15 9123632 9123700 -94371274 - B3A SINE B2 -130 68 1 2 654 342 0 0 0 chr15 9123709 9123747 -94371227 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 654 237 190 35 0 chr15 9123927 9123985 -94370989 + MER33 DNA MER1_type 224 283 -41 2 654 442 313 111 5 chr15 9124812 9125011 -94369963 - ID_B1 SINE B4 -1 223 4 2 654 270 361 32 24 chr15 9125067 9125192 -94369782 + PB1 SINE Alu 2 127 0 2 654 190 325 123 12 chr15 9125455 9125536 -94369438 - MIRb SINE MIR -149 119 30 2 654 536 314 21 15 chr15 9125550 9125841 -94369133 + L1MA4A LINE L1 5550 5867 -436 2 654 537 16 0 0 chr15 9126015 9126077 -94368897 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 654 1284 88 39 0 chr15 9127319 9127500 -94367474 - B2_Mm2 SINE B2 -7 188 1 2 654 317 241 0 87 chr15 9128213 9128340 -94366634 + MIRc SINE MIR 94 209 -59 2 654 313 86 35 0 chr15 9128400 9128458 -94366516 + (TCCC)n Simple_repeat Simple_repeat 1 60 0 2 654 713 194 31 0 chr15 9129214 9129343 -94365631 - ID_B1 SINE B4 -5 219 87 2 654 296 317 25 94 chr15 9129343 9129372 -94365602 + YREP_Mm Unknown Unknown 182 328 -1484 2 654 31 0 0 0 chr15 9129516 9129547 -94365427 + AT_rich Low_complexity Low_complexity 1 31 0 2 654 349 215 16 116 chr15 9130557 9130678 -94364296 + MT2B LTR ERVL 156 264 -337 2 654 931 65 0 8 chr15 9130576 9130701 -94364273 + B1_Mus1 SINE Alu 13 136 -12 2 654 302 0 0 26 chr15 9130701 9130740 -94364234 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 2 654 23 0 0 0 chr15 9131313 9131336 -94363638 + AT_rich Low_complexity Low_complexity 1 23 0 2 654 223 231 0 82 chr15 9132592 9132677 -94362297 + C-rich Low_complexity Low_complexity 5 82 0 2 654 612 0 0 0 chr15 9132684 9132752 -94362222 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 654 1247 30 137 0 chr15 9133842 9134010 -94360964 + B2_Mm2 SINE B2 1 191 -4 2 654 369 0 0 0 chr15 9134016 9134057 -94360917 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 654 281 217 138 21 chr15 9134223 9134317 -94360657 + MLT2B3 LTR ERVL 1 105 -449 2 654 262 321 152 0 chr15 9134317 9134335 -94360639 + MTEb LTR MaLR 1 129 -250 2 654 409 267 0 118 chr15 9134358 9134494 -94360480 + RSINE1 SINE B4 45 164 -1 2 654 886 211 173 8 chr15 9134566 9134814 -94360160 + RLTR28B LTR ERVL 17 305 -176 2 654 811 252 59 43 chr15 9135020 9135273 -94359701 + MTEb LTR MaLR 111 367 -12 2 654 22 0 0 0 chr15 9136635 9136657 -94358317 + AT_rich Low_complexity Low_complexity 1 22 0 2 654 200 338 81 0 chr15 9136907 9136981 -94357993 - MIRm SINE MIR -148 128 49 2 654 225 102 33 17 chr15 9137118 9137162 -94357812 + T-rich Low_complexity Low_complexity 20 65 0 2 654 1214 48 0 7 chr15 9137162 9137310 -94357664 - B1_Mus2 SINE Alu 0 147 1 2 654 225 102 33 17 chr15 9137310 9137325 -94357649 + T-rich Low_complexity Low_complexity 5 19 0 2 654 275 286 24 32 chr15 9137641 9137764 -94357210 - L1M3 LINE L1 -363 5820 5699 2 654 252 0 0 0 chr15 9138285 9138313 -94356661 + (T)n Simple_repeat Simple_repeat 1 28 0 2 654 421 312 206 20 chr15 9138430 9138766 -94356208 + MLT1-int LTR MaLR 66 603 -768 2 654 2943 227 55 88 chr15 9138809 9140002 -94354972 - RLTR25A LTR ERVK 0 1103 1 2 654 964 325 111 14 chr15 9140110 9140472 -94354502 - MER70A LTR ERVL -13 459 63 2 654 3496 57 0 2 chr15 9140533 9140994 -94353980 - L1_Mm LINE L1 -640 5243 4784 2 654 449 148 0 0 chr15 9140997 9141078 -94353896 - L1_Mm LINE L1 -585 5298 5218 2 654 919 122 24 6 chr15 9141120 9141285 -94353689 + L1_Mur2 LINE L1 454 621 -6091 2 654 3232 136 143 6 chr15 9141288 9141925 -94353049 - L1_Mur2 LINE L1 -272 5605 4882 2 654 3016 161 11 17 chr15 9141927 9142447 -94352527 + Lx4A LINE L1 6542 7058 0 2 654 639 48 0 0 chr15 9142472 9142555 -94352419 + (GA)n Simple_repeat Simple_repeat 2 84 0 2 654 3880 160 84 29 chr15 9142607 9143462 -94351512 - RLTR13D6 LTR ERVK 0 902 1 2 654 8777 145 16 37 chr15 9143475 9145179 -94349795 - ETnERV3-int LTR ERVK -31 5777 4122 2 654 5250 112 45 8 chr15 9145183 9146077 -94348897 - ETnERV2-int LTR ERVK -3986 3420 2494 2 654 4069 140 42 39 chr15 9146068 9147006 -94347968 - ETnERV2-int LTR ERVK -5019 789 3 2 654 342 235 0 0 chr15 9147215 9147283 -94347691 - PB1 SINE Alu -3 124 57 2 654 276 185 148 0 chr15 9147337 9147391 -94347583 - ORR1D1 LTR MaLR 0 374 313 2 654 5548 222 87 12 chr15 9147391 9147640 -94347334 - Lx7 LINE L1 -359 7337 7077 2 654 432 0 0 0 chr15 9147640 9147688 -94347286 + (TTCTG)n Simple_repeat Simple_repeat 5 52 0 2 654 5548 222 87 12 chr15 9147688 9148776 -94346198 - Lx7 LINE L1 -620 7076 5900 2 654 3574 72 19 2 chr15 9148795 9149269 -94345705 - RLTR45 LTR ERVK 0 482 1 2 654 7161 43 0 41 chr15 9149269 9150220 -94344754 - RLTR45-int LTR ERVK 0 7244 6333 2 654 2043 97 13 3 chr15 9150220 9150519 -94344455 - RLTR13B1 LTR ERVK -385 508 207 2 654 7783 43 3 9 chr15 9150541 9151555 -94343419 - RLTR45-int LTR ERVK -1172 6072 5065 2 654 3744 82 30 36 chr15 9151548 9152159 -94342815 - RLTR45-int LTR ERVK -3258 3986 3380 2 654 11312 41 40 8 chr15 9152129 9153961 -94341013 - RLTR45-int LTR ERVK -4032 3212 1322 2 654 1041 58 0 0 chr15 9154736 9154874 -94340100 - RLTR45-int LTR ERVK -6426 818 681 2 654 4245 64 107 19 chr15 9155172 9155808 -94339166 - RLTR45-int LTR ERVK -6552 692 1 2 654 3574 72 19 2 chr15 9155808 9156282 -94338692 - RLTR45 LTR ERVK 0 482 1 2 654 846 116 0 0 chr15 9156668 9156797 -94338177 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 2 654 1098 67 0 0 chr15 9156797 9156932 -94338042 - B1_Mus2 SINE Alu -12 135 1 2 654 2138 83 38 9 chr15 9156970 9157286 -94337688 - IAPLTR2b LTR ERVK -2 325 1 2 654 186 179 51 0 chr15 9157352 9157391 -94337583 + MER5B DNA MER1_type 138 178 0 2 654 28 0 0 0 chr15 9158473 9158501 -94336473 + AT_rich Low_complexity Low_complexity 1 28 0 2 654 292 178 105 40 chr15 9160898 9160974 -94334000 - ID4 SINE ID -1 82 2 2 654 4903 51 3 3 chr15 9161715 9162324 -94332650 + L1Md_F2 LINE L1 5973 6581 -1 2 654 774 172 23 74 chr15 9162523 9162699 -94332275 + URR1A DNA MER1_type 60 226 0 2 654 323 322 38 76 chr15 9162894 9163079 -94331895 + L1MD3 LINE L1 5774 5951 -1931 2 654 3283 48 5 0 chr15 9163525 9163919 -94331055 + MTA_Mm LTR MaLR 1 396 0 2 654 1029 144 138 0 chr15 9164046 9164241 -94330733 + URR1B DNA MER1_type 4 225 0 2 654 338 260 62 0 chr15 9164281 9164480 -94330494 + L1MD3 LINE L1 6675 6893 -989 2 654 259 346 93 15 chr15 9164578 9165126 -94329848 + L1MD3 LINE L1 7080 7670 -372 2 654 784 159 30 18 chr15 9165552 9165719 -94329255 + Lx5 LINE L1 6868 7036 -14 2 654 1297 146 129 11 chr15 9165774 9166045 -94328929 + RMER1B Other Other 753 1055 -11 2 654 860 111 0 7 chr15 9166191 9166327 -94328647 + (TTCC)n Simple_repeat Simple_repeat 1 135 0 2 654 734 245 0 0 chr15 9166355 9166498 -94328476 - B1_Mur1 SINE Alu -6 143 1 2 654 753 238 234 16 chr15 9166527 9166685 -94328289 - ORR1D2 LTR MaLR -4 366 177 2 654 947 17 0 17 chr15 9166685 9166803 -94328171 + (GGGAGA)n Simple_repeat Simple_repeat 6 121 0 2 654 753 238 234 16 chr15 9166803 9166900 -94328074 - ORR1D2 LTR MaLR -194 176 57 2 654 689 307 81 81 chr15 9167050 9167530 -94327444 - RMER13A LTR ERVK -295 613 79 2 654 21 0 0 0 chr15 9167556 9167577 -94327397 + AT_rich Low_complexity Low_complexity 1 21 0 2 654 1796 166 47 33 chr15 9167596 9167958 -94327016 - ORR1B2 LTR MaLR 0 367 1 2 654 1006 260 52 6 chr15 9167958 9168368 -94326606 - L1M2 LINE L1 -512 5791 5338 2 654 1312 264 64 21 chr15 9168374 9168749 -94326225 + MTD LTR MaLR 1 391 -28 2 654 294 279 64 13 chr15 9168802 9168958 -94326016 - L1M2 LINE L1 -819 5324 5161 2 654 254 288 76 0 chr15 9168991 9169123 -94325851 - L1M2 LINE L1 -1083 5060 4919 2 654 242 294 73 40 chr15 9169357 9169481 -94325493 - MLT1A1 LTR MaLR -5 403 276 2 654 207 0 0 0 chr15 9169576 9169599 -94325375 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 654 470 253 63 3 chr15 9169664 9169805 -94325169 - MTC LTR MaLR -116 280 130 2 654 594 173 78 16 chr15 9169802 9169931 -94325043 + MTD LTR MaLR 283 419 0 2 654 4884 63 13 0 chr15 9169992 9170670 -94324304 - L1_Mur1 LINE L1 -392 5494 4808 2 654 2446 103 19 3 chr15 9170671 9171049 -94323925 - L1_Mus3 LINE L1 -2 6636 6253 2 654 12550 93 2 24 chr15 9171049 9172977 -94321997 - L1_Mm LINE L1 -4 5879 3994 2 654 1845 169 11 37 chr15 9172978 9173354 -94321620 - RLTR9A LTR ERVK -2 366 1 2 654 316 132 0 36 chr15 9173374 9173429 -94321545 - ETnERV2-int LTR ERVK -23 7383 7331 2 654 385 236 83 19 chr15 9173882 9173990 -94320984 - ETnERV2-int LTR ERVK -1195 6211 6097 2 654 1683 89 41 30 chr15 9173998 9174265 -94320709 - RMER16-int LTR ERVK -1230 4176 3907 2 654 4338 183 58 38 chr15 9174265 9174467 -94320507 - RMER16-int LTR ERVK -2260 3146 2948 2 654 3215 43 69 39 chr15 9174467 9174928 -94320046 + IAPLTR2_Mm LTR ERVK 1 475 0 2 654 4338 183 58 38 chr15 9174928 9175002 -94319972 - RMER16-int LTR ERVK -2459 2947 2877 2 81 357 24 0 0 chr15 9175002 9175044 -94319930 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 655 4338 184 57 38 chr15 9175044 9175829 -94319145 - RMER16-int LTR ERVK -2883 3598 2077 2 655 478 139 25 74 chr15 9175829 9175992 -94318982 + CT-rich Low_complexity Low_complexity 2 156 0 2 655 2710 177 66 20 chr15 9175992 9176632 -94318342 - RMER16-int LTR ERVK -4267 3139 2471 2 655 2321 136 65 90 chr15 9176633 9177198 -94317776 - RLTR45-int LTR ERVK -4625 2619 2069 2 655 397 72 14 28 chr15 9177226 9177297 -94317677 + (TTTTA)n Simple_repeat Simple_repeat 1 70 0 2 655 2001 151 11 32 chr15 9177603 9177973 -94317001 - RLTR9A LTR ERVK -6 362 1 2 655 10446 122 19 6 chr15 9177973 9179761 -94315213 - L1_Mm LINE L1 -1883 4000 2190 2 655 630 89 0 0 chr15 9180625 9180715 -94314259 + (CA)n Simple_repeat Simple_repeat 2 91 0 2 655 213 280 0 0 chr15 9181137 9181187 -94313787 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 655 5245 119 60 16 chr15 9181209 9182178 -94312796 - RLTR13D3 LTR ERVK 0 1114 1 2 655 736 263 6 0 chr15 9182178 9182322 -94312652 - B3A SINE B2 -49 149 5 2 655 247 94 0 0 chr15 9182970 9183002 -94311972 + tRNA-Gly-GGA tRNA tRNA 7 38 -37 2 655 534 103 0 0 chr15 9183210 9183288 -94311686 + (GGA)n Simple_repeat Simple_repeat 2 79 0 2 655 530 167 9 0 chr15 9185387 9185495 -94309479 + CT-rich Low_complexity Low_complexity 1 109 0 2 655 571 361 85 36 chr15 9186210 9186655 -94308319 - L1MB5 LINE L1 -225 5949 5483 2 655 6830 78 33 3 chr15 9186905 9187842 -94307132 - L1Md_F2 LINE L1 -1 6581 5615 2 655 2554 37 43 126 chr15 9187842 9188240 -94306734 - RLTR10B2 LTR ERVK 0 365 1 3 655 6830 78 33 3 chr15 9188240 9188268 -94306706 - L1Md_F2 LINE L1 -968 5614 5587 2 655 4545 241 54 26 chr15 9188280 9189644 -94305330 + Lx7 LINE L1 5672 7073 -623 3 655 377 276 69 50 chr15 9189650 9189810 -94305164 + Lx7 LINE L1 7191 7353 -343 3 655 250 189 26 70 chr15 9189819 9189933 -94305041 + T-rich Low_complexity Low_complexity 2 110 0 3 655 22 56 0 0 chr15 9190009 9190045 -94304929 + AT_rich Low_complexity Low_complexity 1 36 0 3 655 1497 186 37 40 chr15 9191643 9191967 -94303007 + L1VL2 LINE L1 277 599 -5736 3 655 15716 117 208 8 chr15 9191962 9192583 -94302391 + L1Md_F2 LINE L1 1824 2820 -3063 3 655 3110 61 2 10 chr15 9192583 9192982 -94301992 - MTA_Mm LTR MaLR 0 396 1 3 655 15716 117 208 8 chr15 9192982 9195496 -94299478 + L1Md_F2 LINE L1 2821 5586 -297 3 655 7890 48 3 7 chr15 9195496 9196506 -94298468 + L1Md_F2 LINE L1 5587 6582 0 3 655 4752 129 20 1 chr15 9196527 9197333 -94297641 + L1_Mm LINE L1 4631 5451 -432 3 655 5066 89 4 34 chr15 9197334 9197748 -94297226 + L1_Mus1 LINE L1 5824 6232 -335 3 655 3167 23 0 0 chr15 9197748 9198101 -94296873 - IAPEY2_LTR LTR ERVK -4 353 1 3 655 5066 89 4 34 chr15 9198101 9198453 -94296521 + L1_Mus1 LINE L1 6233 6567 0 3 655 9185 120 2 61 chr15 9198461 9198749 -94296225 + L1_Mus3 LINE L1 4329 4613 -1270 3 655 1191 55 7 0 chr15 9198749 9198895 -94296079 + B1_Mm SINE Alu 1 147 0 3 655 9185 105 5 31 chr15 9198895 9201006 -94293968 + L1_Mus3 LINE L1 4614 6638 0 3 655 1009 276 37 78 chr15 9201534 9201943 -94293031 - Lx8 LINE L1 -110 7363 6972 3 655 468 0 0 0 chr15 9201965 9202017 -94292957 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 655 297 155 0 0 chr15 9202765 9202823 -94292151 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 655 268 281 36 123 chr15 9202823 9202961 -94292013 + MTE2a LTR MaLR 63 188 -191 3 655 929 135 21 21 chr15 9203012 9203156 -94291818 + RLTR27 LTR ERVK 166 309 0 3 655 281 51 51 0 chr15 9203181 9203220 -94291754 + RLTR10-int LTR ERVK 163 203 -1784 3 655 546 264 45 45 chr15 9203228 9203426 -94291548 + RLTR10-int LTR ERVK 655 852 -1135 3 655 283 264 0 62 chr15 9203427 9203540 -94291434 + A-rich Low_complexity Low_complexity 5 110 0 3 655 2634 302 43 42 chr15 9203819 9205643 -94289331 + MMERVK10C-int LTR ERVK 3653 5477 -2104 3 655 331 312 18 24 chr15 9205862 9206026 -94288948 + MMERVK10C-int LTR ERVK 6907 7069 -512 3 655 1413 161 0 22 chr15 9206147 9206414 -94288560 + MMERVK10C-int LTR ERVK 7321 7581 0 3 655 2180 111 10 16 chr15 9206414 9206725 -94288249 + RLTR27 LTR ERVK 1 309 0 3 655 333 0 0 0 chr15 9207736 9207773 -94287201 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 655 324 0 0 0 chr15 9207773 9207808 -94287166 + (GA)n Simple_repeat Simple_repeat 2 37 0 3 655 468 363 11 42 chr15 9207866 9208056 -94286918 - B4A SINE B4 0 292 109 3 655 203 0 37 0 chr15 9208084 9208111 -94286863 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 3 655 792 277 94 38 chr15 9208181 9208235 -94286739 - MLT2B3 LTR ERVL -272 282 232 3 655 1011 161 0 0 chr15 9208235 9208415 -94286559 + GA-rich Low_complexity Low_complexity 1 180 0 3 655 792 277 94 38 chr15 9208415 9208626 -94286348 - MLT2B3 LTR ERVL -323 231 2 3 655 1154 83 0 0 chr15 9210384 9210529 -94284445 + B1_Mm SINE Alu 3 147 0 3 655 225 0 0 0 chr15 9210532 9210557 -94284417 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 655 999 199 127 0 chr15 9211678 9211969 -94283005 - Lx9 LINE L1 0 7644 7317 3 655 270 0 0 0 chr15 9211976 9212006 -94282968 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 655 806 274 19 9 chr15 9212919 9213129 -94281845 - B3 SINE B2 0 216 5 3 655 489 218 48 66 chr15 9213492 9213659 -94281315 + RNLTR23 LTR ERVK 479 642 0 3 655 357 62 0 0 chr15 9214040 9214088 -94280886 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 655 697 296 0 26 chr15 9214553 9214747 -94280227 - B3A SINE B2 0 198 10 3 655 372 292 103 44 chr15 9215573 9215709 -94279265 - B1F SINE Alu -5 144 1 3 655 563 0 15 0 chr15 9216062 9216129 -94278845 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 3 655 467 364 51 5 chr15 9216134 9216330 -94278644 - ID_B1 SINE B4 -9 215 11 3 655 347 86 89 62 chr15 9216745 9216768 -94278206 - RMER17D LTR ERVK -394 495 381 3 655 225 326 41 20 chr15 9216768 9216857 -94278117 - RMER10B LTR ERVL -122 276 190 3 655 825 11 0 0 chr15 9216857 9216951 -94278023 + (GAA)n Simple_repeat Simple_repeat 3 96 0 3 655 225 326 41 20 chr15 9216951 9217008 -94277966 - RMER10B LTR ERVL -209 189 128 3 655 412 254 8 106 chr15 9218060 9218192 -94276782 - B1_Mur2 SINE Alu -1 119 1 3 655 378 0 0 0 chr15 9218512 9218554 -94276420 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 655 375 119 0 0 chr15 9218747 9218814 -94276160 + (TG)n Simple_repeat Simple_repeat 1 67 0 3 655 243 146 0 0 chr15 9218814 9218869 -94276105 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 655 2011 308 115 15 chr15 9218899 9219897 -94275077 - Lx8 LINE L1 -178 7295 6198 3 655 628 243 118 0 chr15 9219948 9220092 -94274882 - RSINE1 SINE B4 -2 163 3 3 655 283 355 17 11 chr15 9220549 9220723 -94274251 - LTR52-int LTR ERVL -3163 393 219 3 655 638 47 12 0 chr15 9220950 9221036 -94273938 + (TTCC)n Simple_repeat Simple_repeat 3 89 0 3 655 264 30 0 0 chr15 9221090 9221123 -94273851 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 3 655 214 346 29 38 chr15 9221141 9221246 -94273728 + PB1D10 SINE Alu 13 116 -1 3 655 2595 189 67 23 chr15 9222209 9222734 -94272240 - RMER19C LTR ERVK -17 594 47 3 655 1011 133 48 0 chr15 9222759 9222924 -94272050 - RMER19C LTR ERVK -436 175 3 3 655 1014 198 84 55 chr15 9223004 9223314 -94271660 - Lx LINE L1 0 7696 7378 3 655 588 121 0 0 chr15 9223318 9223409 -94271565 + (TATG)n Simple_repeat Simple_repeat 2 92 0 3 655 480 202 53 15 chr15 9223415 9223546 -94271428 - Lx LINE L1 -583 7113 6978 3 655 35216 59 5 7 chr15 9223548 9229714 -94265260 - L1Md_F3 LINE L1 -14 6570 420 3 655 3732 228 57 63 chr15 9229714 9230830 -94264144 - Lx6 LINE L1 -468 6992 5884 3 655 483 60 0 0 chr15 9231249 9231316 -94263658 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 655 272 232 93 51 chr15 9231562 9231680 -94263294 - MLT1A1 LTR MaLR -16 392 270 3 655 651 26 0 0 chr15 9232379 9232456 -94262518 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 655 1095 94 0 0 chr15 9232990 9233170 -94261804 + (TC)n Simple_repeat Simple_repeat 1 180 0 3 655 4942 138 19 11 chr15 9233244 9234040 -94260934 - Lx LINE L1 -1 6653 5852 3 655 4578 101 11 40 chr15 9234076 9234822 -94260152 - RMER17A LTR ERVK -19 732 9 3 655 2164 148 3 0 chr15 9234831 9235189 -94259785 - L1_Mm LINE L1 -30 5853 5495 3 655 454 258 31 55 chr15 9235355 9235482 -94259492 - ID_B1 SINE B4 -2 222 99 3 655 243 0 0 0 chr15 9235798 9235825 -94259149 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 3 655 377 318 126 52 chr15 9237846 9237904 -94257070 + L1M4 LINE L1 2610 2662 -3484 3 655 801 230 9 62 chr15 9237904 9238131 -94256843 - B3 SINE B2 0 216 2 3 655 377 318 126 52 chr15 9238131 9239082 -94255892 + L1M4 LINE L1 2663 3693 -2453 3 655 306 0 0 0 chr15 9239215 9239249 -94255725 + (GTTTG)n Simple_repeat Simple_repeat 2 35 0 3 655 988 87 51 0 chr15 9239255 9239393 -94255581 - B1_Mus1 SINE Alu -2 146 2 3 655 1067 88 0 26 chr15 9239422 9239573 -94255401 - B1_Mm SINE Alu 0 147 1 3 655 210 143 0 0 chr15 9239636 9239671 -94255303 + (TATATG)n Simple_repeat Simple_repeat 4 38 0 3 655 2154 213 47 16 chr15 9242806 9243321 -94251653 - Lx5 LINE L1 0 7050 6520 3 655 313 204 183 35 chr15 9243309 9243451 -94251523 - Lx4A LINE L1 -902 6156 5994 3 655 29 0 0 0 chr15 9243665 9243694 -94251280 + AT_rich Low_complexity Low_complexity 1 29 0 3 655 317 67 0 0 chr15 9244840 9244885 -94250089 - L1_Mus2 LINE L1 -7 6559 6515 3 655 11531 157 11 5 chr15 9244885 9247020 -94247954 + L1_Mm LINE L1 3710 5856 -27 3 655 3223 24 42 0 chr15 9247022 9247402 -94247572 - MTA_Mm LTR MaLR 0 396 1 3 655 3908 66 11 10 chr15 9247403 9247952 -94247022 - MTA_Mm-int LTR MaLR -426 1366 560 3 655 1011 133 48 0 chr15 9247957 9248122 -94246852 - RMER19C LTR ERVK -436 175 3 3 655 1014 198 84 55 chr15 9248202 9248512 -94246462 - Lx7 LINE L1 0 7696 7378 3 655 588 121 0 0 chr15 9248516 9248607 -94246367 + (TATG)n Simple_repeat Simple_repeat 2 92 0 3 655 379 198 58 19 chr15 9248613 9248716 -94246258 - Lx7 LINE L1 -583 7113 7007 3 655 2154 213 47 16 chr15 9250016 9250531 -94244443 - Lx5 LINE L1 0 7050 6520 3 655 313 204 183 35 chr15 9250519 9250661 -94244313 - Lx4A LINE L1 -902 6156 5994 3 655 29 0 0 0 chr15 9250875 9250904 -94244070 + AT_rich Low_complexity Low_complexity 1 29 0 3 655 317 67 0 0 chr15 9252050 9252095 -94242879 - L1_Mus2 LINE L1 -7 6559 6515 3 655 11531 157 11 5 chr15 9252095 9254230 -94240744 + L1_Mm LINE L1 3710 5856 -27 3 655 3223 24 42 0 chr15 9254232 9254612 -94240362 - MTA_Mm LTR MaLR 0 396 1 3 655 7922 64 8 6 chr15 9254613 9255691 -94239283 - MTA_Mm-int LTR MaLR -17 1081 1 3 655 3152 49 21 0 chr15 9255691 9256079 -94238895 - MTA_Mm LTR MaLR 0 396 1 3 655 4946 123 5 15 chr15 9256079 9256870 -94238104 + L1_Mus3 LINE L1 5854 6636 -2 3 655 194 136 0 22 chr15 9256881 9256926 -94238048 + A-rich Low_complexity Low_complexity 4 47 0 3 655 383 400 12 6 chr15 9256932 9257103 -94237871 + B4A SINE B4 107 278 -14 3 655 642 58 0 0 chr15 9257175 9257262 -94237712 + (TC)n Simple_repeat Simple_repeat 1 87 0 3 655 279 71 0 0 chr15 9257262 9257303 -94237671 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 655 216 111 0 0 chr15 9257480 9257516 -94237458 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 655 246 32 0 0 chr15 9257550 9257581 -94237393 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 655 22 0 0 0 chr15 9257818 9257840 -94237134 + AT_rich Low_complexity Low_complexity 1 22 0 3 655 1229 304 27 43 chr15 9257841 9258357 -94236617 + Lx8 LINE L1 6182 6689 -784 3 655 2810 201 51 13 chr15 9258460 9259151 -94235823 + L1Md_F LINE L1 509 1225 -5391 3 655 3870 98 8 0 chr15 9259146 9259739 -94235235 + L1Md_F LINE L1 1875 2472 -3411 3 655 1856 52 295 22 chr15 9259739 9260017 -94234957 + IAPEY2_LTR LTR ERVK 1 354 -3 3 655 8942 127 11 20 chr15 9260022 9261648 -94233326 + IAPEY3-int LTR ERVK 1 1982 -5698 3 655 3390 65 9 0 chr15 9261625 9262073 -94232901 + IAPEY3-int LTR ERVK 2238 2689 -4991 3 655 204 368 44 0 chr15 9262088 9262202 -94232772 + L3b LINE CR1 335 453 -29 3 655 2749 115 15 31 chr15 9262202 9262853 -94232121 + IAPEY3-int LTR ERVK 6984 7576 -5 3 655 9875 117 1 0 chr15 9262853 9264424 -94230550 + L1_Mm LINE L1 3119 4691 -1192 3 655 1074 66 7 0 chr15 9265024 9265160 -94229814 + B1_Mm SINE Alu 1 137 -10 3 655 200 34 0 33 chr15 9265160 9265190 -94229784 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 655 677 56 0 0 chr15 9267235 9267324 -94227650 - L1_Mus1 LINE L1 -641 5925 5837 4 655 4170 92 5 0 chr15 9267315 9267913 -94227061 + L1_Mus1 LINE L1 5922 6522 -45 4 655 923 250 19 19 chr15 9267954 9268166 -94226808 - B3 SINE B2 0 216 5 4 655 234 300 11 0 chr15 9268855 9268945 -94226029 + (TTATG)n Simple_repeat Simple_repeat 1 91 0 4 655 645 42 62 0 chr15 9268945 9269041 -94225933 + L1Md_T LINE L1 6481 6582 0 4 655 27859 122 19 29 chr15 9269109 9272740 -94222234 - L1Md_F2 LINE L1 0 6582 2995 4 655 531 0 0 0 chr15 9272740 9272799 -94222175 + (TTTTG)n Simple_repeat Simple_repeat 1 59 0 4 655 27859 121 9 10 chr15 9272799 9275537 -94219437 - L1Md_F2 LINE L1 -2889 2994 245 4 655 558 103 0 0 chr15 9275688 9275775 -94219199 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 4 655 595 323 74 21 chr15 9275779 9275969 -94219005 - ID_B1 SINE B4 -9 215 16 4 655 290 87 22 0 chr15 9276193 9276239 -94218735 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 4 655 318 342 103 21 chr15 9276425 9276658 -94218316 + HAL1-3A_ME LINE L1 1968 2219 -639 4 655 396 118 0 0 chr15 9277600 9277668 -94217306 + (CA)n Simple_repeat Simple_repeat 2 69 0 4 655 234 105 0 0 chr15 9277848 9277886 -94217088 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 655 378 85 0 0 chr15 9277886 9277945 -94217029 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 655 2108 284 105 20 chr15 9278136 9278984 -94215990 - Lx8 LINE L1 -356 7117 6198 4 655 589 261 120 0 chr15 9279035 9279177 -94215797 - RSINE1 SINE B4 -4 161 3 4 655 749 110 8 0 chr15 9280023 9280141 -94214833 + (TCCC)n Simple_repeat Simple_repeat 4 122 0 4 655 261 0 0 0 chr15 9280218 9280247 -94214727 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 4 655 2761 200 29 21 chr15 9281336 9281897 -94213077 - RMER19C LTR ERVK 0 611 47 4 655 1008 129 49 0 chr15 9281897 9282060 -94212914 - RMER19C LTR ERVK -440 171 1 4 655 381 146 257 0 chr15 9282127 9282250 -94212724 - Lx7 LINE L1 0 7696 7561 4 655 7198 127 7 11 chr15 9282306 9284244 -94210730 + L1_Mus2 LINE L1 4659 6566 0 4 655 429 161 128 43 chr15 9284244 9284361 -94210613 - Lx LINE L1 -7 7689 7563 4 655 2688 40 0 3 chr15 9284386 9284709 -94210265 - RLTRETN_Mm LTR ERVK 0 322 1 4 655 453 50 0 0 chr15 9284709 9284769 -94210205 - MMETn-int LTR ERVK 0 4844 4785 4 655 15567 32 0 3 chr15 9284769 9286701 -94208273 - MMETn-int LTR ERVK -2917 1927 1 4 655 2732 34 0 3 chr15 9286701 9287024 -94207950 - RLTRETN_Mm LTR ERVK 0 322 1 4 655 2151 176 59 14 chr15 9287024 9287446 -94207528 - Lx LINE L1 -16 6638 6198 4 655 1762 98 8 4 chr15 9287450 9287715 -94207259 - L1_Mus2 LINE L1 -2 6564 6299 4 655 2166 130 0 6 chr15 9287698 9288039 -94206935 + L1_Mm LINE L1 5498 5836 -47 4 655 1659 147 141 0 chr15 9288058 9288391 -94206583 - L1_Mm LINE L1 -9 5874 5495 4 655 517 230 34 50 chr15 9288572 9288691 -94206283 - ID_B1 SINE B4 -11 213 97 4 655 23 33 0 0 chr15 9288715 9288745 -94206229 + AT_rich Low_complexity Low_complexity 1 30 0 4 655 6783 109 15 24 chr15 9288801 9289342 -94205632 - L1VL4 LINE L1 -1490 2069 1551 4 655 3048 71 12 7 chr15 9289342 9289751 -94205223 - RLTR9F LTR ERVK -4 411 1 4 655 6783 151 15 14 chr15 9289751 9290901 -94204073 - L1VL4 LINE L1 -2009 1550 381 4 655 261 261 0 0 chr15 9292026 9292141 -94202833 + (CA)n Simple_repeat Simple_repeat 2 116 0 4 655 521 317 98 78 chr15 9292598 9292650 -94202324 + L1M4 LINE L1 2616 2662 -3484 4 655 727 257 4 57 chr15 9292650 9292877 -94202097 - B3 SINE B2 0 216 2 4 655 521 317 98 78 chr15 9292877 9293365 -94201609 + L1M4 LINE L1 2663 3167 -2979 4 655 189 0 0 0 chr15 9293450 9293471 -94201503 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 4 655 1090 100 0 0 chr15 9293472 9293612 -94201362 - B1_Mm SINE Alu -6 141 2 4 655 975 83 0 0 chr15 9293615 9293747 -94201227 + B1_Mus2 SINE Alu 16 147 0 4 655 236 53 0 26 chr15 9293747 9293786 -94201188 + (CAAAAA)n Simple_repeat Simple_repeat 4 41 0 4 655 397 290 89 31 chr15 9293792 9294119 -94200855 + L1M4 LINE L1 3332 3677 -2469 4 655 219 114 0 0 chr15 9294325 9294360 -94200614 + (TATATG)n Simple_repeat Simple_repeat 4 38 0 4 655 6259 60 12 22 chr15 9295423 9296253 -94198721 - RLTR13B2 LTR ERVK 0 822 1 4 655 1379 114 14 0 chr15 9297545 9297764 -94197210 - L1_Mus3 LINE L1 -3 6635 6414 4 655 2096 226 36 32 chr15 9298567 9299097 -94195877 - Lx5 LINE L1 -3 7047 6516 4 655 275 246 102 21 chr15 9299077 9299221 -94195753 - Lx5 LINE L1 -916 6142 5994 4 655 423 0 0 0 chr15 9299431 9299478 -94195496 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 655 279 0 0 0 chr15 9299636 9299667 -94195307 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 655 414 0 0 0 chr15 9299667 9299712 -94195262 + (GA)n Simple_repeat Simple_repeat 1 46 0 4 655 387 0 0 0 chr15 9301665 9301708 -94193266 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 655 230 261 58 0 chr15 9301719 9301788 -94193186 + MT2B2 LTR ERVL 169 241 -343 4 655 475 259 28 7 chr15 9301904 9302048 -94192926 - L1M2 LINE L1 -757 5543 5397 4 655 352 235 118 0 chr15 9302047 9302149 -94192825 + L1MA4 LINE L1 5729 5842 -458 4 655 397 297 112 26 chr15 9302350 9302502 -94192472 - RLTR23 LTR ERV1 0 430 266 4 655 6623 117 21 3 chr15 9302523 9303570 -94191404 + Lx LINE L1 5589 6654 0 4 655 346 336 13 83 chr15 9303735 9303891 -94191083 - RLTR23 LTR ERV1 -278 152 8 4 655 23 0 0 0 chr15 9304003 9304026 -94190948 + AT_rich Low_complexity Low_complexity 1 23 0 4 81 28752 68 5 69 chr15 9304087 9309416 -94185558 + L1Md_F2 LINE L1 604 5586 -297 4 656 7952 50 3 2 chr15 9309416 9310409 -94184565 + L1Md_F2 LINE L1 5587 6580 -2 4 656 2313 94 6 0 chr15 9310409 9310760 -94184214 + L1_Mm LINE L1 2715 3067 -2816 4 656 2074 105 121 0 chr15 9310763 9311136 -94183838 + MusHAL1 LINE L1 97 514 -2198 4 656 1472 103 25 0 chr15 9311134 9311377 -94183597 - Lx3_Mus LINE L1 -733 6276 6028 4 656 2641 85 54 0 chr15 9311374 9311762 -94183212 + Lx3_Mus LINE L1 5616 6024 -985 4 656 822 273 93 26 chr15 9311877 9312382 -94182592 - Lx3_Mus LINE L1 -1693 6003 5451 4 656 633 318 129 38 chr15 9312387 9312858 -94182116 + Lx8 LINE L1 6837 7350 -123 4 656 2215 200 142 8 chr15 9315023 9315553 -94179421 - Lx5 LINE L1 -3 7047 6447 4 656 2713 194 58 22 chr15 9315552 9316182 -94178792 + Lx5 LINE L1 5794 6459 -591 4 656 36720 51 6 8 chr15 9316218 9322549 -94172425 - L1Md_T LINE L1 -1 6584 284 4 656 1322 172 33 65 chr15 9323957 9324293 -94170681 + L1_Mur2 LINE L1 4562 4886 -991 4 656 33855 45 0 3 chr15 9324293 9329516 -94165458 + L1Md_T LINE L1 285 5589 -297 4 656 8417 34 1 0 chr15 9329516 9330511 -94164463 + L1Md_T LINE L1 5590 6585 0 4 656 3856 178 16 9 chr15 9330514 9331269 -94163705 + L1_Mm LINE L1 4877 5636 -247 4 656 1591 98 4 4 chr15 9331270 9331506 -94163468 + L1_Mus4 LINE L1 6397 6632 -4 4 656 21 0 0 0 chr15 9331891 9331912 -94163062 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 625 12 24 0 chr15 9332714 9332796 -94162178 + (TCTA)n Simple_repeat Simple_repeat 3 86 0 4 656 499 193 33 8 chr15 9332820 9332940 -94162034 - Lx9 LINE L1 -206 7438 7316 4 656 7704 45 1 2 chr15 9332972 9334330 -94160644 - L1Md_F3 LINE L1 -12 6572 5217 4 656 7796 46 8 0 chr15 9334327 9335345 -94159629 + L1Md_F3 LINE L1 4189 5214 -669 4 656 518 281 17 55 chr15 9335497 9335734 -94159240 + Lx9 LINE L1 6710 6937 -707 4 656 4384 46 2 2 chr15 9337633 9338199 -94156775 + L1Md_F3 LINE L1 5020 5585 -298 4 656 8161 33 5 3 chr15 9338200 9339182 -94155792 + L1Md_F3 LINE L1 5587 6570 -14 4 656 5538 173 49 6 chr15 9340463 9341491 -94153483 - Lx5 LINE L1 -5 7045 5974 4 656 252 282 52 22 chr15 9341988 9342122 -94152852 - Lx8 LINE L1 -1 7472 7335 4 656 279 219 14 14 chr15 9342123 9342197 -94152777 + T-rich Low_complexity Low_complexity 2 75 0 4 656 266 218 0 25 chr15 9342204 9342284 -94152690 + CT-rich Low_complexity Low_complexity 1 78 0 4 656 1498 344 51 30 chr15 9342284 9343162 -94151812 - Lx8 LINE L1 -60 7413 6517 4 656 541 284 32 80 chr15 9343170 9343419 -94151555 - Lx8 LINE L1 -1132 6341 6105 4 656 26 0 0 0 chr15 9345499 9345525 -94149449 + AT_rich Low_complexity Low_complexity 1 26 0 4 656 471 295 61 13 chr15 9346056 9346286 -94148688 - ERVL-int LTR ERVL -819 4938 4698 4 656 7016 91 123 2 chr15 9346330 9347775 -94147199 + L1_Mus2 LINE L1 4851 6566 0 4 656 1044 92 0 0 chr15 9347792 9347959 -94147015 + L1_Mus4 LINE L1 5564 5730 -153 4 656 553 100 0 0 chr15 9348117 9348197 -94146777 + L1_Mus4 LINE L1 5521 5600 -283 4 656 2481 92 3 16 chr15 9348186 9348624 -94146350 + L1_Mus4 LINE L1 5733 6136 -502 4 656 1993 92 19 0 chr15 9348625 9348940 -94146034 + L1_Mur1 LINE L1 4450 4770 -1116 4 656 3823 144 38 31 chr15 9349656 9350335 -94144639 - Lx4A LINE L1 0 7058 6375 4 656 432 322 7 0 chr15 9350385 9350528 -94144446 - ERVL-B4-int LTR ERVL -4089 1625 1482 4 656 27 29 0 0 chr15 9350643 9350677 -94144297 + AT_rich Low_complexity Low_complexity 1 34 0 4 656 225 0 0 0 chr15 9350768 9350793 -94144181 + (TA)n Simple_repeat Simple_repeat 2 26 0 4 656 1296 122 7 0 chr15 9351937 9352354 -94142620 + (TGGA)n Simple_repeat Simple_repeat 1 419 0 4 656 243 189 0 0 chr15 9355233 9355286 -94139688 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 656 743 167 33 0 chr15 9355407 9355557 -94139417 + Lx4A LINE L1 6902 7056 -2 4 656 32 26 0 0 chr15 9356310 9356349 -94138625 + AT_rich Low_complexity Low_complexity 1 39 0 4 656 1120 75 0 20 chr15 9356731 9356880 -94138094 + B1_Mus2 SINE Alu 1 146 -1 4 656 311 58 42 42 chr15 9356881 9356953 -94138021 + (CAAAA)n Simple_repeat Simple_repeat 3 74 0 4 656 327 354 73 39 chr15 9357052 9357443 -94137531 + L1MB8 LINE L1 5478 5880 -298 4 656 604 206 11 11 chr15 9358317 9358432 -94136542 + PB1D9 SINE Alu 2 123 -4 4 656 1003 290 95 52 chr15 9360050 9360705 -94134269 - Lx9 LINE L1 0 7644 6962 4 656 495 0 0 0 chr15 9361394 9361449 -94133525 + (TAAAA)n Simple_repeat Simple_repeat 3 57 0 4 656 1132 206 135 25 chr15 9361449 9361723 -94133251 - ORR1D1 LTR MaLR -66 308 5 4 656 324 70 0 0 chr15 9362402 9362445 -94132529 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 656 812 61 9 0 chr15 9362966 9363081 -94131893 + (TTTCC)n Simple_repeat Simple_repeat 4 119 0 4 656 1190 84 33 27 chr15 9363083 9363266 -94131708 - B2_Mm1t SINE B2 -3 190 7 4 656 24 0 0 0 chr15 9363837 9363861 -94131113 + AT_rich Low_complexity Low_complexity 1 24 0 4 656 347 308 110 71 chr15 9364168 9364454 -94130520 + L1MC4a LINE L1 6390 6702 -1180 4 656 207 0 0 0 chr15 9364454 9364477 -94130497 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 656 347 308 110 71 chr15 9364477 9364599 -94130375 + L1MC4a LINE L1 6703 6813 -1069 4 656 326 191 146 0 chr15 9364611 9364700 -94130274 + L1_Rod LINE L1 348 449 -6723 5 656 351 96 0 0 chr15 9366534 9366586 -94128388 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 656 244 190 77 39 chr15 9366761 9366865 -94128109 - Lx9 LINE L1 -6 7638 7531 5 656 36449 43 0 3 chr15 9366861 9373322 -94121652 - L1Md_T LINE L1 0 6585 45 5 656 1761 144 121 9 chr15 9374288 9374603 -94120371 - ORR1B2 LTR MaLR -17 350 1 5 656 509 175 0 9 chr15 9374893 9375008 -94119966 - Lx9 LINE L1 -22 7622 7509 5 656 1996 158 48 16 chr15 9375022 9375396 -94119578 - Lx9 LINE L1 -511 7133 6748 5 656 670 149 3 5 chr15 9375396 9375513 -94119461 - MTC LTR MaLR -168 253 124 5 656 258 262 86 112 chr15 9375510 9375858 -94119116 + RMER17D LTR ERVK 157 495 -394 5 656 186 103 0 0 chr15 9375884 9375913 -94119061 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 656 190 295 16 16 chr15 9376505 9376567 -94118407 + MIRc SINE MIR 107 168 -100 5 656 991 106 6 6 chr15 9376635 9376796 -94118178 + (TTC)n Simple_repeat Simple_repeat 1 161 0 5 656 544 268 35 21 chr15 9376827 9376968 -94118006 - RSINE1 SINE B4 -21 144 2 5 656 548 349 32 5 chr15 9377127 9377317 -94117657 - MER58A DNA MER1_type -10 214 20 5 656 1082 139 124 5 chr15 9378056 9378258 -94116716 - URR1A DNA MER1_type 0 226 1 5 656 26 0 0 0 chr15 9380272 9380298 -94114676 + AT_rich Low_complexity Low_complexity 1 26 0 5 656 1756 193 89 8 chr15 9380331 9380713 -94114261 + MTC LTR MaLR 1 413 -8 5 656 537 280 38 13 chr15 9380817 9380976 -94113998 + MLT1A1 LTR MaLR 222 384 -24 5 656 230 271 0 0 chr15 9381103 9381162 -94113812 + RMER1B Other Other 509 567 -499 5 656 1060 124 63 16 chr15 9381175 9381364 -94113610 + RMER1B Other Other 706 903 -163 5 656 250 231 0 0 chr15 9381391 9381456 -94113518 + RMER1A Other Other 921 985 -45 5 656 4406 170 116 15 chr15 9382401 9383331 -94111643 - RLTR25B LTR ERVK 0 1028 5 5 656 366 72 35 46 chr15 9383334 9383421 -94111553 + GA-rich Low_complexity Low_complexity 3 88 0 5 656 549 44 0 0 chr15 9383536 9383604 -94111370 + (GGAA)n Simple_repeat Simple_repeat 2 69 0 5 656 623 94 10 0 chr15 9383783 9383879 -94111095 + (TCTA)n Simple_repeat Simple_repeat 2 98 0 5 656 249 139 0 0 chr15 9383960 9384003 -94110971 + (A)n Simple_repeat Simple_repeat 1 43 0 5 656 609 283 26 48 chr15 9384636 9384825 -94110149 + B3A SINE B2 14 198 0 5 656 446 103 0 13 chr15 9386478 9386485 -94108489 + (GA)n Simple_repeat Simple_repeat 1 7 0 5 656 372 22 0 0 chr15 9386485 9386530 -94108444 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 656 446 103 0 13 chr15 9386530 9386601 -94108373 + (GA)n Simple_repeat Simple_repeat 2 72 0 5 656 21 0 0 0 chr15 9386791 9386812 -94108162 + AT_rich Low_complexity Low_complexity 1 21 0 5 656 1226 47 0 0 chr15 9386873 9387021 -94107953 + B1_Mus1 SINE Alu 1 148 0 5 656 1117 185 28 28 chr15 9387597 9387814 -94107160 - ORR1D1 LTR MaLR 0 374 158 5 656 369 62 0 0 chr15 9387816 9387864 -94107110 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 656 340 217 0 0 chr15 9387878 9387947 -94107027 - ORR1D1 LTR MaLR -305 69 1 5 656 181 288 96 0 chr15 9387989 9388062 -94106912 + MIR SINE MIR 64 143 -65 5 656 391 238 111 32 chr15 9388279 9388405 -94106569 + ID_B1 SINE B4 82 217 -7 5 656 413 284 35 0 chr15 9388742 9388858 -94106116 + RMER20B LTR ERVK 1 120 -507 5 656 2582 198 29 27 chr15 9389196 9389721 -94105253 - RLTR20B2 LTR ERVK -34 526 1 5 656 191 239 203 49 chr15 9390189 9390312 -94104662 - MIR3 SINE MIR -25 183 42 5 656 259 132 208 0 chr15 9391597 9391650 -94103324 + RMER1B Other Other 761 824 -242 5 656 1044 148 82 86 chr15 9391759 9392039 -94102935 + RMER1B Other Other 788 1066 0 5 656 207 139 0 0 chr15 9393261 9393297 -94101677 + (CAG)n Simple_repeat Simple_repeat 1 36 0 5 656 22 80 0 0 chr15 9394129 9394179 -94100795 + AT_rich Low_complexity Low_complexity 1 50 0 5 656 183 254 127 0 chr15 9394210 9394273 -94100701 - MIR SINE MIR -9 253 183 5 656 518 128 13 0 chr15 9394312 9394390 -94100584 - B3 SINE B2 -137 79 1 5 656 183 271 42 0 chr15 9395795 9395843 -94099131 + MIRm SINE MIR 110 159 -117 5 656 225 0 0 0 chr15 9396896 9396921 -94098053 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 656 2633 92 174 31 chr15 9396929 9397294 -94097680 - RMER2 LTR ERV1 -56 511 82 5 656 877 42 0 0 chr15 9397294 9397413 -94097561 - L1Md_T LINE L1 0 6582 6464 5 656 2633 92 174 31 chr15 9397413 9397494 -94097480 - RMER2 LTR ERV1 -486 81 1 5 656 1770 136 21 7 chr15 9398003 9398284 -94096690 - RMER6C LTR ERVK -404 286 2 5 656 1199 236 7 7 chr15 9398284 9398578 -94096396 - RMER6-int LTR ERVK -10 3167 2874 5 656 315 169 132 0 chr15 9398590 9398673 -94096301 - RMER6-int LTR ERVK -3083 94 1 5 656 909 174 89 5 chr15 9398673 9398864 -94096110 - RMER6C LTR ERVK 0 690 484 5 656 1466 175 30 53 chr15 9398884 9399186 -94095788 - RLTR17 LTR ERVK 0 692 398 5 656 423 0 0 0 chr15 9399899 9399946 -94095028 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 656 2782 76 0 0 chr15 9400395 9400778 -94094196 - L1_Mus3 LINE L1 -440 6198 5816 5 656 23 0 0 0 chr15 9401647 9401670 -94093304 + AT_rich Low_complexity Low_complexity 1 23 0 5 656 300 172 0 0 chr15 9402348 9402406 -94092568 + T-rich Low_complexity Low_complexity 1 58 0 5 656 21 0 0 0 chr15 9403324 9403345 -94091629 + AT_rich Low_complexity Low_complexity 1 21 0 5 656 479 60 0 15 chr15 9404174 9404242 -94090732 + (GGGA)n Simple_repeat Simple_repeat 2 68 0 5 656 333 339 0 25 chr15 9404530 9404651 -94090323 - MER2B DNA MER2_type -14 322 205 5 656 425 374 20 5 chr15 9404783 9404979 -94089995 + MER3 DNA MER1_type 1 199 -10 5 656 433 266 112 29 chr15 9405454 9405618 -94089356 + Lx9 LINE L1 7305 7486 -158 5 656 529 40 26 0 chr15 9405618 9405694 -94089280 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 5 656 433 266 112 29 chr15 9405694 9405842 -94089132 + Lx9 LINE L1 7487 7643 -1 5 656 666 322 35 54 chr15 9406493 9406920 -94088054 - Lx9 LINE L1 -27 7617 7199 5 656 246 275 29 14 chr15 9407693 9407763 -94087211 - RLTR24 LTR ERV1 -457 72 2 5 656 296 281 54 61 chr15 9408787 9408935 -94086039 + MLT1A0 LTR MaLR 219 365 0 5 656 305 330 109 6 chr15 9409205 9409379 -94085595 + L1MA8 LINE L1 4990 5181 -962 5 656 22 35 0 0 chr15 9409457 9409486 -94085488 + AT_rich Low_complexity Low_complexity 1 29 0 5 656 602 280 61 25 chr15 9409649 9409847 -94085127 + B3 SINE B2 1 205 -11 5 656 590 298 28 91 chr15 9409859 9410343 -94084631 + L1MA8 LINE L1 5479 5935 -356 5 656 1117 324 34 9 chr15 9410359 9410826 -94084148 + Lx9 LINE L1 6891 7369 -275 5 656 1558 76 54 8 chr15 9412311 9412550 -94082424 - L1_Mm LINE L1 -379 5504 5255 5 656 3663 66 2 2 chr15 9412550 9413020 -94081954 + L1_Mus1 LINE L1 6098 6567 0 5 656 240 177 109 31 chr15 9413755 9413819 -94081155 + MLT2C2 LTR ERVL 235 303 -161 5 656 17029 88 26 6 chr15 9413925 9416605 -94078369 - L1VL4 LINE L1 -2 3557 825 5 656 7413 81 1 3 chr15 9416606 9418293 -94076681 - L1_Mus1 LINE L1 0 6567 4915 5 656 3568 141 43 16 chr15 9418285 9418936 -94076038 - L1VL4 LINE L1 -5466 836 210 5 656 1949 278 36 25 chr15 9418936 9419620 -94075354 - RMER1C Other Other -291 1051 258 5 656 291 182 0 0 chr15 9419730 9419807 -94075167 + CT-rich Low_complexity Low_complexity 2 78 0 5 656 1029 223 23 19 chr15 9419973 9420188 -94074786 + B3 SINE B2 1 216 0 5 656 758 255 13 3 chr15 9420335 9420529 -94074445 - B3 SINE B2 -5 193 1 5 656 23 0 0 0 chr15 9421361 9421384 -94073590 + AT_rich Low_complexity Low_complexity 1 23 0 5 656 696 334 58 28 chr15 9422489 9422849 -94072125 + MLT1D LTR MaLR 82 452 -53 5 656 257 178 0 0 chr15 9422910 9422955 -94072019 - Lx7 LINE L1 -584 7112 7068 5 656 765 224 20 55 chr15 9423351 9423363 -94071611 - B3A SINE B2 -6 192 183 5 656 378 0 0 0 chr15 9423363 9423405 -94071569 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 656 765 224 20 55 chr15 9423405 9423591 -94071383 - B3A SINE B2 -16 182 1 5 656 414 0 0 0 chr15 9423601 9423647 -94071327 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 656 340 244 8 46 chr15 9423698 9423817 -94071157 + Lx4B LINE L1 6709 6811 -165 5 656 509 99 0 0 chr15 9424336 9424417 -94070557 - L1_Mus1 LINE L1 0 6567 6487 5 656 7144 88 20 9 chr15 9424472 9425646 -94069328 - L1_Mus4 LINE L1 -9 6627 5442 5 656 13570 106 14 29 chr15 9425641 9425884 -94069090 - MusHAL1 LINE L1 -389 2964 2747 5 656 234 0 0 0 chr15 9425884 9425910 -94069064 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 656 13570 106 14 29 chr15 9425910 9427204 -94067770 - MusHAL1 LINE L1 -607 2746 1469 5 656 6068 77 1 1 chr15 9427204 9428000 -94066974 - L1_Mus2 LINE L1 0 6566 5771 5 656 13570 97 10 21 chr15 9428000 9428916 -94066058 - MusHAL1 LINE L1 -1885 1468 547 5 656 3349 25 22 2 chr15 9428918 9429321 -94065653 + IAPLTR2a LTR ERVK 1 411 0 5 656 905 159 27 11 chr15 9429322 9429506 -94065468 + IAPEz-int LTR ERVK 9 195 -6286 5 656 226 321 0 0 chr15 9429506 9429559 -94065415 + RLTR27 LTR ERVK 223 275 -34 5 656 3443 55 1 16 chr15 9429559 9430137 -94064837 + IAPEz-int LTR ERVK 168 662 -5819 5 656 932 50 0 0 chr15 9430137 9430256 -94064718 + IAPEz-int LTR ERVK 1359 1477 -5004 5 656 1789 91 8 0 chr15 9430251 9430503 -94064471 + IAPEz-int LTR ERVK 2244 2497 -5183 5 656 13337 68 9 0 chr15 9430521 9432307 -94062667 + IAPEz-int LTR ERVK 4678 6479 -2 5 656 3246 30 27 2 chr15 9432309 9432710 -94062264 + IAPLTR2a LTR ERVK 1 411 0 5 656 1655 191 6 29 chr15 9432710 9433060 -94061914 - L1VL4 LINE L1 -5560 742 401 5 656 186 43 0 0 chr15 9433064 9433087 -94061887 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 5 656 216 0 0 0 chr15 9433095 9433119 -94061855 + (TTA)n Simple_repeat Simple_repeat 1 24 0 5 656 7210 63 1 9 chr15 9433119 9434086 -94060888 - L1Md_F2 LINE L1 -23 6559 5601 5 656 1426 72 20 0 chr15 9434086 9434281 -94060693 - L1_Mus2 LINE L1 -8 6558 6360 5 656 883 266 5 39 chr15 9434650 9434857 -94060117 - B3 SINE B2 -9 207 8 5 656 392 248 115 8 chr15 9435184 9435306 -94059668 + MLT1N2 LTR MaLR 426 560 -2 5 656 423 0 0 0 chr15 9435784 9435831 -94059143 + (TC)n Simple_repeat Simple_repeat 1 47 0 5 656 516 32 0 0 chr15 9435831 9435892 -94059082 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 10 199 299 27 118 chr15 9437123 9437233 -94057741 + MIRb SINE MIR 98 197 -71 5 657 607 386 66 52 chr15 9439218 9439505 -94055469 + B4A SINE B4 2 292 0 6 657 548 211 7 0 chr15 9439550 9439692 -94055282 + (CA)n Simple_repeat Simple_repeat 1 143 0 6 657 299 113 19 0 chr15 9442802 9442855 -94052119 + (GAAA)n Simple_repeat Simple_repeat 3 56 0 6 657 432 167 29 29 chr15 9442908 9443013 -94051961 - Lx9 LINE L1 -21 7623 7519 6 657 239 308 0 0 chr15 9444304 9444356 -94050618 - Zaphod2 DNA Tip100 -3444 80 29 6 657 1161 75 7 0 chr15 9445043 9445189 -94049785 + B1_Mus2 SINE Alu 1 147 0 6 657 470 335 154 7 chr15 9445219 9445497 -94049477 + MLT2C2 LTR ERVL 96 417 -47 6 657 650 93 9 0 chr15 9445497 9445605 -94049369 + (TCTA)n Simple_repeat Simple_repeat 1 109 0 6 657 470 335 154 7 chr15 9445605 9445618 -94049356 + MLT2C2 LTR ERVL 418 430 -34 6 657 385 254 246 0 chr15 9446712 9446830 -94048144 - B1_Mur2 SINE Alu 0 149 3 6 657 367 327 19 0 chr15 9446893 9447000 -94047974 + B1F SINE Alu 7 115 -34 6 657 467 318 125 0 chr15 9447394 9447586 -94047388 + ID_B1 SINE B4 2 217 -7 6 657 394 110 103 38 chr15 9447591 9447732 -94047242 + Lx3B LINE L1 6762 6969 -4 6 657 402 312 60 55 chr15 9447776 9447993 -94046981 + L1M5 LINE L1 3775 3992 -2154 6 657 23 0 0 0 chr15 9447997 9448020 -94046954 + AT_rich Low_complexity Low_complexity 1 23 0 6 657 447 294 100 21 chr15 9448182 9448512 -94046462 + L1M5 LINE L1 4224 4579 -1567 6 657 327 146 0 0 chr15 9448813 9448868 -94046106 + (CA)n Simple_repeat Simple_repeat 1 55 0 6 657 252 233 0 0 chr15 9448926 9448986 -94045988 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 657 34 24 0 0 chr15 9449915 9449956 -94045018 + AT_rich Low_complexity Low_complexity 1 41 0 6 657 625 282 78 34 chr15 9450596 9450867 -94044107 + MER33 DNA MER1_type 1 272 -52 6 657 213 121 0 0 chr15 9450960 9450993 -94043981 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 657 38 0 0 0 chr15 9451051 9451089 -94043885 + AT_rich Low_complexity Low_complexity 1 38 0 6 657 339 121 0 0 chr15 9451440 9451498 -94043476 + (CAAT)n Simple_repeat Simple_repeat 2 59 0 6 657 260 91 23 0 chr15 9452393 9452437 -94042537 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 6 657 441 0 0 0 chr15 9452807 9452856 -94042118 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 657 465 19 0 0 chr15 9453247 9453301 -94041673 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 657 591 321 19 63 chr15 9453366 9453635 -94041339 - B4A SINE B4 -31 261 5 6 657 280 358 58 64 chr15 9454242 9454474 -94040500 - MIR SINE MIR -4 264 30 6 657 283 58 0 71 chr15 9455142 9455198 -94039776 + (TCTCTG)n Simple_repeat Simple_repeat 3 54 0 6 657 190 234 23 15 chr15 9456057 9456187 -94038787 + (TA)n Simple_repeat Simple_repeat 2 132 0 6 657 1685 10 0 0 chr15 9456653 9456848 -94038126 - L1Md_A LINE L1 0 6582 6388 6 657 280 370 0 18 chr15 9458363 9458473 -94036501 - PB1D10 SINE Alu -9 108 1 6 657 327 185 0 0 chr15 9458490 9458544 -94036430 + PB1D9 SINE Alu 2 55 -65 6 657 450 65 0 0 chr15 9458547 9458609 -94036365 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 657 276 30 0 0 chr15 9458623 9458656 -94036318 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 657 411 21 0 0 chr15 9459500 9459548 -94035426 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 657 667 255 117 8 chr15 9459936 9460185 -94034789 - Lx8 LINE L1 -520 6953 6678 6 657 1126 315 8 8 chr15 9460189 9460557 -94034417 + Lx8 LINE L1 6961 7328 -145 6 657 3675 233 9 17 chr15 9460590 9461395 -94033579 - Lx5 LINE L1 -5 7045 6248 6 657 589 147 20 0 chr15 9461383 9461485 -94033489 + Lx5 LINE L1 6148 6251 -799 6 657 186 241 0 53 chr15 9462478 9462535 -94032439 + MIR3 SINE MIR 111 164 -44 6 657 237 274 16 0 chr15 9464355 9464417 -94030557 + CT-rich Low_complexity Low_complexity 3 65 0 6 657 717 108 8 0 chr15 9464523 9464643 -94030331 - Lx2 LINE L1 -1 6996 6876 6 657 202 118 0 29 chr15 9465279 9465314 -94029660 + (TTC)n Simple_repeat Simple_repeat 2 35 0 6 657 38554 19 2 6 chr15 9466180 9472576 -94022398 - L1Md_A LINE L1 -1 6581 212 6 657 946 212 68 205 chr15 9473437 9473615 -94021359 - ORR1C2 LTR MaLR -1 383 177 6 657 585 42 0 0 chr15 9473615 9473687 -94021287 + (GA)n Simple_repeat Simple_repeat 2 73 0 6 657 946 212 68 205 chr15 9473687 9473952 -94021022 - ORR1C2 LTR MaLR -208 176 1 6 657 737 202 29 52 chr15 9473976 9474123 -94020851 - RLTR11A LTR ERVK 0 528 385 6 657 3405 35 2 0 chr15 9474123 9474518 -94020456 + MTA_Mm LTR MaLR 1 396 0 6 657 8892 40 9 15 chr15 9474518 9475623 -94019351 + MTA_Mm-int LTR MaLR 1 1098 0 6 657 737 202 29 52 chr15 9475623 9475646 -94019328 - RLTR11A LTR ERVK -144 384 362 6 657 659 44 0 52 chr15 9475646 9475719 -94019255 + MTA_Mm LTR MaLR 1 91 -305 6 657 703 174 0 0 chr15 9475703 9475818 -94019156 - ORR1C2 LTR MaLR -269 115 1 6 657 1179 224 77 158 chr15 9475842 9476416 -94018558 - RLTR11A LTR ERVK 0 528 2 6 657 1054 174 119 0 chr15 9476784 9476985 -94017989 - URR1A DNA MER1_type 0 226 2 6 657 279 0 0 0 chr15 9477854 9477885 -94017089 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 657 491 178 22 22 chr15 9477894 9478072 -94016902 + (CAGAGA)n Simple_repeat Simple_repeat 2 179 0 6 657 218 135 0 37 chr15 9478085 9478139 -94016835 + (CAGAGA)n Simple_repeat Simple_repeat 2 53 0 6 657 22834 11 0 0 chr15 9480157 9482898 -94012076 + L1Md_A LINE L1 2847 5586 -297 6 657 8722 18 1 0 chr15 9482898 9483893 -94011081 + L1Md_A LINE L1 5587 6582 0 6 657 5706 132 23 2 chr15 9484485 9485394 -94009580 - Lx3B LINE L1 0 6973 6046 6 657 1462 225 88 9 chr15 9485401 9485720 -94009254 - Lx9 LINE L1 -860 6784 6441 6 657 205 200 0 0 chr15 9486288 9486323 -94008651 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 6 657 316 155 16 49 chr15 9486324 9486385 -94008589 + HAL1-3A_ME LINE L1 1973 2031 -827 6 657 3265 35 30 5 chr15 9486863 9487264 -94007710 + RLTR10A LTR ERVK 1 411 0 6 657 1667 81 8 8 chr15 9487265 9487502 -94007472 + RLTR10-int LTR ERVK 312 548 -1439 6 657 3717 80 68 7 chr15 9487501 9488058 -94006916 + RLTR10-int LTR ERVK 402 992 -995 6 657 355 324 41 29 chr15 9488228 9488473 -94006501 + RLTR10-int LTR ERVK 1317 1564 -6017 6 657 335 143 0 0 chr15 9488492 9488548 -94006426 + RLTR10-int LTR ERVK 447 502 -6040 6 657 3439 56 81 22 chr15 9488548 9489041 -94005933 + RLTR10-int LTR ERVK 5006 5527 -1015 6 657 4886 102 30 39 chr15 9489053 9489964 -94005010 + RLTR10-int LTR ERVK 1288 1987 0 6 657 2950 52 54 0 chr15 9489965 9490353 -94004621 + RLTR10A LTR ERVK 3 411 0 6 657 534 31 0 0 chr15 9491340 9491404 -94003570 + (TCC)n Simple_repeat Simple_repeat 3 66 0 6 657 24 0 0 0 chr15 9493197 9493221 -94001753 + AT_rich Low_complexity Low_complexity 1 24 0 6 657 946 50 0 0 chr15 9493332 9493452 -94001522 - B1_Mus1 SINE Alu 0 148 29 6 657 1039 252 131 16 chr15 9493453 9493828 -94001146 - Lx2B LINE L1 -25 6975 6558 6 657 251 304 25 0 chr15 9494934 9495013 -93999961 - PB1D10 SINE Alu 0 117 37 6 657 327 193 0 0 chr15 9496476 9496559 -93998415 + (CA)n Simple_repeat Simple_repeat 2 84 0 6 657 251 114 23 0 chr15 9496738 9496782 -93998192 + (CAA)n Simple_repeat Simple_repeat 1 45 0 6 657 22 80 0 0 chr15 9498197 9498247 -93996727 + AT_rich Low_complexity Low_complexity 1 50 0 6 657 219 281 0 0 chr15 9498334 9498391 -93996583 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 657 27 0 0 0 chr15 9498494 9498521 -93996453 + AT_rich Low_complexity Low_complexity 1 27 0 6 657 417 177 0 0 chr15 9498853 9498932 -93996042 + (TA)n Simple_repeat Simple_repeat 2 80 0 6 657 226 258 51 14 chr15 9498933 9499002 -93995972 - B1_Mus1 SINE Alu -41 76 1 6 657 1598 49 0 5 chr15 9499539 9499743 -93995231 + L1_Mus1 LINE L1 6362 6564 -3 6 657 219 139 0 0 chr15 9499753 9499789 -93995185 + (GGAGAA)n Simple_repeat Simple_repeat 2 37 0 6 657 332 59 0 19 chr15 9500451 9500503 -93994471 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 657 617 152 319 6 chr15 9501057 9501216 -93993758 - Lx9 LINE L1 -6 7638 7418 2 657 423 98 0 0 chr15 9501216 9501277 -93993697 + (CA)n Simple_repeat Simple_repeat 1 61 0 3 657 300 91 0 0 chr15 9501277 9501321 -93993653 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 657 617 142 138 28 chr15 9501321 9501432 -93993542 - Lx9 LINE L1 -227 7417 7306 2 657 262 356 136 39 chr15 9503155 9503485 -93991489 + Charlie8 DNA MER1_type 46 407 -2021 5 657 1188 195 189 0 chr15 9503514 9503868 -93991106 - Lx9 LINE L1 -22 7622 7202 6 657 21 0 0 0 chr15 9504303 9504324 -93990650 + AT_rich Low_complexity Low_complexity 1 21 0 7 657 339 372 71 30 chr15 9506482 9506748 -93988226 - L3 LINE CR1 -476 4013 3737 8 657 783 133 0 0 chr15 9507703 9507831 -93987143 + (TC)n Simple_repeat Simple_repeat 1 128 0 9 657 4599 73 14 16 chr15 9508604 9509229 -93985745 - L1Md_F2 LINE L1 0 6582 5959 1 657 1218 44 0 0 chr15 9509229 9509389 -93985585 + L1_Mm LINE L1 4259 4418 -1465 1 657 234 311 19 62 chr15 9510428 9510589 -93984385 - MIRb SINE MIR -26 242 89 1 657 210 191 0 0 chr15 9511000 9511042 -93983932 + CT-rich Low_complexity Low_complexity 1 42 0 1 657 530 113 10 0 chr15 9512619 9512716 -93982258 - Lx LINE L1 -2 6652 6555 1 657 917 268 54 5 chr15 9512791 9513037 -93981937 + MTD LTR MaLR 161 405 -14 1 657 259 298 126 24 chr15 9514812 9514939 -93980035 + LTR86A1 LTR ERVL 305 444 -69 1 657 182 160 0 20 chr15 9515447 9515498 -93979476 + T-rich Low_complexity Low_complexity 2 51 0 1 657 1908 228 33 45 chr15 9516952 9517379 -93977595 + Lx7 LINE L1 7121 7543 -153 1 657 954 90 6 19 chr15 9517379 9517537 -93977437 - L1Md_F2 LINE L1 -3 6579 6424 1 657 1908 228 33 45 chr15 9517537 9517692 -93977282 + Lx7 LINE L1 7544 7696 0 1 657 239 328 75 33 chr15 9519456 9519576 -93975398 + MLT1E1A LTR MaLR 556 680 0 2 657 366 302 93 47 chr15 9519689 9519925 -93975049 + Lx8 LINE L1 7034 7280 -193 2 657 1107 53 0 0 chr15 9520268 9520419 -93974555 + (TG)n Simple_repeat Simple_repeat 1 151 0 2 657 644 236 28 7 chr15 9520791 9520936 -93974038 + B1_Mur1 SINE Alu 1 148 -1 2 657 1093 203 105 0 chr15 9521098 9521423 -93973551 + Lx9 LINE L1 7284 7642 -2 2 657 284 127 0 18 chr15 9521549 9521605 -93973369 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 657 226 271 48 68 chr15 9522330 9522433 -93972541 + PB1D7 SINE Alu 13 113 -7 2 657 182 299 35 78 chr15 9523021 9523137 -93971837 + L2 LINE L2 2659 2769 -650 2 657 240 35 0 0 chr15 9523434 9523463 -93971511 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 657 516 129 0 0 chr15 9523463 9523564 -93971410 + (GA)n Simple_repeat Simple_repeat 1 101 0 2 657 441 0 0 0 chr15 9524597 9524646 -93970328 + (TATG)n Simple_repeat Simple_repeat 2 50 0 3 657 675 0 0 0 chr15 9525519 9525594 -93969380 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 3 657 180 254 78 16 chr15 9525946 9526010 -93968964 - MER5B DNA MER1_type -97 81 14 3 657 189 0 0 0 chr15 9527183 9527204 -93967770 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 3 657 483 18 0 0 chr15 9527317 9527373 -93967601 + (TAAAA)n Simple_repeat Simple_repeat 5 60 0 3 657 831 154 0 23 chr15 9527509 9527642 -93967332 + B1_Mus2 SINE Alu 9 138 -9 3 657 270 56 0 0 chr15 9527642 9527678 -93967296 + (CAA)n Simple_repeat Simple_repeat 2 37 0 3 657 253 229 0 0 chr15 9528026 9528087 -93966887 + A-rich Low_complexity Low_complexity 1 61 0 3 657 203 88 29 0 chr15 9529119 9529153 -93965821 + (TTC)n Simple_repeat Simple_repeat 2 36 0 3 657 186 206 13 27 chr15 9531902 9531977 -93962997 + (TA)n Simple_repeat Simple_repeat 2 75 0 3 657 662 331 17 32 chr15 9531979 9532305 -93962669 - Lx8 LINE L1 -151 7322 7012 4 657 332 349 65 12 chr15 9532561 9532729 -93962245 + MIRb SINE MIR 41 217 -51 4 657 322 241 26 9 chr15 9532776 9532889 -93962085 + L1MA5 LINE L1 6179 6293 -7 4 657 2178 148 59 0 chr15 9534290 9534647 -93960327 + ORR1C1 LTR MaLR 1 378 0 4 657 589 311 12 30 chr15 9535137 9535306 -93959668 + B3 SINE B2 46 211 -5 4 657 3186 36 31 0 chr15 9535831 9536215 -93958759 - MTA_Mm LTR MaLR 0 396 1 4 657 333 0 0 0 chr15 9537735 9537772 -93957202 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 657 267 175 0 0 chr15 9539113 9539170 -93955804 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 657 1051 212 5 33 chr15 9541380 9541595 -93953379 - B3 SINE B2 -6 210 2 4 657 505 322 21 0 chr15 9541812 9541955 -93953019 + B1F SINE Alu 1 146 -3 4 657 210 171 0 0 chr15 9541956 9541997 -93952977 + (CAAT)n Simple_repeat Simple_repeat 4 44 0 5 657 225 191 0 0 chr15 9542748 9542795 -93952179 + T-rich Low_complexity Low_complexity 1 47 0 5 657 1382 179 29 4 chr15 9544356 9544630 -93950344 + RLTR24 LTR ERV1 1 281 -248 5 657 383 204 34 11 chr15 9544672 9544761 -93950213 + RLTR24 LTR ERV1 191 281 -248 5 657 1572 195 75 3 chr15 9544811 9545119 -93949855 + RLTR24 LTR ERV1 199 528 -1 5 657 834 244 43 5 chr15 9545209 9545421 -93949553 - MTD LTR MaLR -14 405 196 5 657 453 150 0 0 chr15 9545421 9545521 -93949453 + (T)n Simple_repeat Simple_repeat 1 100 0 5 657 2590 75 14 0 chr15 9545524 9545872 -93949102 - L1Md_A LINE L1 0 6582 6230 5 657 544 300 132 23 chr15 9545872 9546046 -93948928 - MTD LTR MaLR -212 195 3 5 657 519 282 101 25 chr15 9546644 9546971 -93948003 + L1MA7 LINE L1 5936 6287 -4 5 657 324 0 0 0 chr15 9546976 9547012 -93947962 + (TCTA)n Simple_repeat Simple_repeat 2 37 0 5 657 6347 114 33 19 chr15 9547621 9548616 -93946358 + Lx3A LINE L1 5962 6970 -11 6 657 546 16 0 0 chr15 9548616 9548679 -93946295 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 6 657 277 272 11 21 chr15 9548780 9548874 -93946100 - Lx7 LINE L1 -1743 5953 5861 6 657 1228 245 84 40 chr15 9548856 9549035 -93945939 - L1_Rod LINE L1 -37 5810 5614 6 657 3008 47 3 3 chr15 9549035 9549400 -93945574 + RLTR10B2 LTR ERVK 1 365 0 6 657 1228 245 84 40 chr15 9549400 9549721 -93945253 - L1_Rod LINE L1 -234 5613 5288 6 657 1625 198 46 14 chr15 9549721 9550070 -93944904 + MTD LTR MaLR 1 360 -59 6 657 468 0 0 0 chr15 9550081 9550133 -93944841 + (GAAA)n Simple_repeat Simple_repeat 1 52 0 6 657 891 106 13 7 chr15 9550133 9550284 -93944690 + (GAGAA)n Simple_repeat Simple_repeat 2 154 0 6 657 366 298 59 86 chr15 9551709 9551999 -93942975 + B4 SINE B4 2 283 -9 6 657 896 108 25 0 chr15 9552063 9552220 -93942754 + (GA)n Simple_repeat Simple_repeat 2 162 0 6 657 317 276 91 38 chr15 9552683 9552815 -93942159 + Lx8 LINE L1 6958 7096 -377 7 657 453 103 0 0 chr15 9553136 9553204 -93941770 + (TG)n Simple_repeat Simple_repeat 1 68 0 7 657 529 313 15 8 chr15 9553209 9553341 -93941633 - RSINE1 SINE B4 -31 134 2 7 657 1153 68 0 7 chr15 9553375 9553522 -93941452 + B1_Mus2 SINE Alu 2 147 0 7 657 213 119 0 0 chr15 9553522 9553564 -93941410 + (A)n Simple_repeat Simple_repeat 1 42 0 7 657 252 100 0 0 chr15 9554075 9554115 -93940859 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 657 268 301 101 14 chr15 9554167 9554315 -93940659 + L1M5 LINE L1 5662 5822 -418 7 657 423 0 0 0 chr15 9554361 9554408 -93940566 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 657 236 357 58 35 chr15 9555241 9555415 -93939559 + Charlie8 DNA MER1_type 89 266 -2162 7 657 1274 231 62 65 chr15 9556649 9557033 -93937941 + ORR1C2 LTR MaLR 1 383 -1 7 657 1019 326 48 23 chr15 9557258 9557700 -93937274 - Lx8 LINE L1 -142 7331 6879 8 657 201 176 0 0 chr15 9558300 9558334 -93936640 + A-rich Low_complexity Low_complexity 1 34 0 8 657 197 365 108 0 chr15 9559016 9559090 -93935884 - MIR SINE MIR -180 82 1 8 657 29 0 0 0 chr15 9559305 9559334 -93935640 + AT_rich Low_complexity Low_complexity 1 29 0 8 657 188 340 0 0 chr15 9559692 9559745 -93935229 + MIR SINE MIR 113 165 -97 8 657 657 101 0 0 chr15 9559757 9559856 -93935118 + (TC)n Simple_repeat Simple_repeat 2 100 0 8 657 252 0 0 0 chr15 9559856 9559884 -93935090 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 657 297 360 87 19 chr15 9561508 9561715 -93933259 + MIR SINE MIR 12 232 -30 8 657 387 274 105 24 chr15 9562245 9562500 -93932474 - Tigger7 DNA MER2_type -66 2425 2133 8 657 247 336 35 26 chr15 9562503 9562616 -93932358 - Tigger7 DNA MER2_type -2189 302 189 8 657 508 282 94 14 chr15 9562703 9562915 -93932059 - RMER5 LTR ERV1 0 534 306 8 657 374 39 19 0 chr15 9562945 9562997 -93931977 + (CA)n Simple_repeat Simple_repeat 1 53 0 9 657 315 345 36 76 chr15 9563338 9563457 -93931517 + MER67C LTR ERV1 1 109 -405 9 657 330 26 0 0 chr15 9563457 9563496 -93931478 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 657 320 354 40 60 chr15 9563496 9563655 -93931319 + MER67C LTR ERV1 110 304 -407 9 657 315 0 0 0 chr15 9564079 9564114 -93930860 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 9 657 3989 41 0 6 chr15 9564577 9565067 -93929907 - L1Md_F2 LINE L1 -1 6581 6095 9 657 261 0 0 0 chr15 9565200 9565229 -93929745 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9 657 21 57 0 0 chr15 9565471 9565506 -93929468 + AT_rich Low_complexity Low_complexity 1 35 0 9 657 766 143 56 28 chr15 9566238 9566382 -93928592 + B1_Mur3 SINE Alu 1 148 -1 9 657 22 0 0 0 chr15 9566988 9567010 -93927964 + AT_rich Low_complexity Low_complexity 1 22 0 9 657 22 35 0 0 chr15 9567100 9567129 -93927845 + AT_rich Low_complexity Low_complexity 1 29 0 9 657 22 0 0 0 chr15 9567185 9567207 -93927767 + AT_rich Low_complexity Low_complexity 1 22 0 1 657 25 0 0 0 chr15 9567539 9567564 -93927410 + AT_rich Low_complexity Low_complexity 1 25 0 1 658 246 326 128 21 chr15 9568279 9568420 -93926554 + L2 LINE L2 2894 3049 -370 1 658 1241 287 120 17 chr15 9568638 9569056 -93925918 - RMER15 LTR ERVL -45 530 70 1 658 9869 55 8 0 chr15 9569078 9571052 -93923922 - L1Md_F2 LINE L1 -4 6578 4585 1 658 2661 71 22 5 chr15 9571052 9571422 -93923552 + RLTR10A LTR ERVK 1 376 -35 1 658 2921 35 0 0 chr15 9571422 9571766 -93923208 - L1Md_F3 LINE L1 -348 6236 5893 1 658 2895 29 3 0 chr15 9571766 9572110 -93922864 + L1Md_F3 LINE L1 6225 6569 -15 1 658 203 0 37 0 chr15 9572113 9572140 -93922834 + (GAA)n Simple_repeat Simple_repeat 2 29 0 1 658 362 120 0 0 chr15 9572140 9572190 -93922784 + RLTR10A LTR ERVK 362 411 0 1 658 1320 70 11 19 chr15 9572192 9572435 -93922539 + IAP-d-int LTR ERVK 121 602 -1385 1 658 757 212 0 6 chr15 9572432 9572589 -93922385 + IAP-d-int LTR ERVK 347 502 -6040 1 658 3436 59 86 13 chr15 9572593 9573057 -93921917 + IAP-d-int LTR ERVK 5028 5525 -1017 1 658 1583 69 9 5 chr15 9573063 9573280 -93921694 + IAP-d-int LTR ERVK 5667 5884 -658 1 658 4969 80 19 14 chr15 9573281 9573977 -93920997 + RLTR10-int LTR ERVK 1288 1986 -1 1 658 3104 50 25 10 chr15 9573977 9574382 -93920592 + RLTR10A LTR ERVK 1 411 0 1 658 2686 34 0 0 chr15 9574382 9574708 -93920266 - L1_Mm LINE L1 -1293 4590 4265 1 658 1453 310 153 32 chr15 9574682 9575710 -93919264 - Lx8 LINE L1 -6 7467 6316 1 658 252 211 41 27 chr15 9575716 9575789 -93919185 - RMER15 LTR ERVL -470 105 32 1 658 585 266 58 0 chr15 9575861 9576000 -93918974 - B1_Mur1 SINE Alu -1 148 2 1 658 214 70 44 44 chr15 9578847 9578892 -93916082 + (TATG)n Simple_repeat Simple_repeat 3 47 0 1 658 207 353 49 0 chr15 9578968 9579070 -93915904 - MIRb SINE MIR -117 159 53 1 658 252 275 0 0 chr15 9579187 9579256 -93915718 + Lx7 LINE L1 7598 7666 -30 1 658 219 36 0 0 chr15 9579298 9579326 -93915648 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1 658 5269 211 53 16 chr15 9579496 9580684 -93914290 + ORR1D1-int LTR MaLR 138 1369 -1 1 658 1023 244 168 19 chr15 9580685 9581007 -93913967 + ORR1D1 LTR MaLR 1 370 -4 1 658 180 182 0 0 chr15 9581653 9581697 -93913277 + (CATA)n Simple_repeat Simple_repeat 4 47 0 1 658 473 112 11 11 chr15 9583905 9583995 -93910979 - Lx LINE L1 -7 6647 6558 1 658 44 35 0 0 chr15 9585082 9585140 -93909834 + AT_rich Low_complexity Low_complexity 1 58 0 1 658 1051 296 17 22 chr15 9585628 9586036 -93908938 + Lx9 LINE L1 7076 7481 -163 1 658 204 135 0 0 chr15 9586863 9586900 -93908074 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1 658 522 248 141 19 chr15 9586901 9587057 -93907917 - B3 SINE B2 0 216 42 1 658 1165 96 6 6 chr15 9587160 9587339 -93907635 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 1 658 462 36 0 0 chr15 9587793 9587849 -93907125 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 658 246 372 0 105 chr15 9589530 9589644 -93905330 + RSINE1 SINE B4 6 107 -58 1 658 222 37 0 0 chr15 9590147 9590174 -93904800 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 658 29 0 0 0 chr15 9591651 9591680 -93903294 + AT_rich Low_complexity Low_complexity 1 29 0 1 658 186 133 0 0 chr15 9592134 9592164 -93902810 + (TATG)n Simple_repeat Simple_repeat 1 30 0 1 658 263 224 0 0 chr15 9592571 9592620 -93902354 + tRNA-Ala-GCA tRNA tRNA 2 50 -25 1 658 242 320 13 26 chr15 9592620 9592648 -93902326 + ID4_ SINE ID 8 83 0 1 658 4135 56 0 10 chr15 9593077 9593585 -93901389 + RLTR1C LTR ERV1 1 503 0 1 658 2789 167 5 40 chr15 9593585 9594140 -93900834 + MMERGLN-int LTR ERV1 1 536 -7020 1 658 215 56 56 0 chr15 9594172 9594208 -93900766 + (TCTG)n Simple_repeat Simple_repeat 2 39 0 1 658 1107 93 0 0 chr15 9594622 9594773 -93900201 + MMERGLN-int LTR ERV1 772 922 -2776 1 658 1492 192 84 22 chr15 9594768 9595221 -93899753 + MMERGLN-int LTR ERV1 2051 2231 -1467 1 658 721 288 5 5 chr15 9595226 9595439 -93899535 + MMERGLN-int LTR ERV1 4335 4547 -3231 1 658 355 373 17 0 chr15 9595547 9595665 -93899309 + B1F SINE Alu 9 128 -21 1 658 805 184 0 58 chr15 9595823 9595940 -93899034 + B1_Mus1 SINE Alu 2 118 -30 1 658 3351 40 2 0 chr15 9595940 9596335 -93898639 + MTA_Mm LTR MaLR 1 396 0 1 658 805 184 0 58 chr15 9596335 9596373 -93898601 + B1_Mus1 SINE Alu 119 148 0 1 658 266 73 24 0 chr15 9596401 9596442 -93898532 + (GGGA)n Simple_repeat Simple_repeat 4 45 0 1 658 216 0 0 0 chr15 9596442 9596466 -93898508 + (GAAAA)n Simple_repeat Simple_repeat 4 27 0 1 658 846 148 11 28 chr15 9596466 9596554 -93898420 + polypurine Low_complexity Low_complexity 2 89 0 1 658 198 0 0 0 chr15 9596554 9596576 -93898398 + (CAAG)n Simple_repeat Simple_repeat 1 22 0 1 658 846 148 11 28 chr15 9596576 9596668 -93898306 + polypurine Low_complexity Low_complexity 90 179 0 1 658 307 141 0 30 chr15 9596676 9596742 -93898232 + GA-rich Low_complexity Low_complexity 1 64 0 1 658 24 77 0 0 chr15 9598784 9598836 -93896138 + AT_rich Low_complexity Low_complexity 1 52 0 1 658 270 0 0 0 chr15 9599015 9599045 -93895929 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 658 2610 284 50 30 chr15 9599046 9599888 -93895086 - Lx7 LINE L1 -695 7001 6143 1 658 2482 276 66 21 chr15 9599979 9600816 -93894158 + Lx8 LINE L1 6579 7452 -21 1 658 975 154 0 0 chr15 9600843 9601012 -93893962 + (TATATG)n Simple_repeat Simple_repeat 2 170 0 1 658 41 21 0 0 chr15 9601034 9601082 -93893892 + AT_rich Low_complexity Low_complexity 1 48 0 1 658 507 364 13 19 chr15 9601440 9601597 -93893377 + B3A SINE B2 28 183 -15 1 658 351 78 15 30 chr15 9601615 9601681 -93893293 + (GGGAGA)n Simple_repeat Simple_repeat 6 70 0 1 658 310 335 95 24 chr15 9602432 9602600 -93892374 + L3b LINE CR1 84 263 -219 1 658 847 297 76 31 chr15 9602889 9603261 -93891713 - MTD LTR MaLR -26 393 22 1 658 22 35 0 0 chr15 9603855 9603884 -93891090 + AT_rich Low_complexity Low_complexity 1 29 0 1 658 233 310 101 27 chr15 9606584 9606733 -93888241 + MIRb SINE MIR 87 246 -22 1 658 887 121 7 35 chr15 9606864 9607009 -93887965 - B1_Mur4 SINE Alu 0 150 10 1 658 272 286 0 101 chr15 9606914 9607023 -93887951 - MT2B LTR ERVL -344 257 160 1 658 545 328 62 25 chr15 9608664 9608939 -93886035 + B4A SINE B4 2 286 -6 1 658 1196 41 0 7 chr15 9611322 9611469 -93883505 + B1_Mus2 SINE Alu 2 147 0 1 658 4369 73 0 3 chr15 9612563 9613129 -93881845 - L1Md_T LINE L1 -1 6581 6018 1 658 435 77 31 0 chr15 9613129 9613194 -93881780 + L1Md_T LINE L1 5988 6054 -528 1 658 351 0 0 0 chr15 9614202 9614241 -93880733 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 658 432 0 0 0 chr15 9614241 9614288 -93880686 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 658 6497 158 12 2 chr15 9614988 9616172 -93878802 - Lx LINE L1 -153 5730 4535 1 658 5396 126 8 45 chr15 9616177 9617128 -93877846 + Lx LINE L1 5736 6651 -3 1 658 327 306 36 9 chr15 9617181 9617293 -93877681 - L1MB5 LINE L1 -197 5977 5863 1 658 252 0 0 0 chr15 9617752 9617780 -93877194 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1 658 21 0 0 0 chr15 9618175 9618196 -93876778 + AT_rich Low_complexity Low_complexity 1 21 0 1 658 22 35 0 0 chr15 9618418 9618447 -93876527 + AT_rich Low_complexity Low_complexity 1 29 0 1 658 397 255 20 34 chr15 9618475 9618497 -93876477 - L1MC1 LINE L1 -495 5838 5819 1 658 5813 171 45 24 chr15 9618497 9619694 -93875280 - Lx2B LINE L1 0 7000 5779 1 658 1673 128 17 10 chr15 9619694 9619985 -93874989 - Lx2 LINE L1 -3 6994 6702 1 658 1206 127 20 0 chr15 9619985 9620182 -93874792 - Lx2 LINE L1 -1210 5787 5587 1 658 22 70 0 0 chr15 9620528 9620571 -93874403 + AT_rich Low_complexity Low_complexity 1 43 0 1 658 299 310 0 14 chr15 9620624 9620696 -93874278 + ID4_ SINE ID 2 72 -11 1 658 588 266 39 11 chr15 9621133 9621349 -93873625 + Lx4B LINE L1 6756 7050 -8 1 658 5826 233 73 35 chr15 9622897 9624777 -93870197 + Lx9 LINE L1 4330 6336 -1308 1 658 3537 19 5 2 chr15 9624777 9625191 -93869783 - L1Md_T LINE L1 0 6582 6168 1 658 5826 235 74 27 chr15 9625191 9626269 -93868705 + Lx9 LINE L1 6337 7440 -204 1 658 494 302 16 78 chr15 9626532 9626787 -93868187 - MER2 DNA MER2_type -1 344 106 1 658 191 133 0 22 chr15 9627201 9627247 -93867727 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 1 658 6265 152 153 33 chr15 9627708 9629213 -93865761 - Lx2B LINE L1 -1180 4697 3011 1 658 6353 158 26 1 chr15 9629213 9629273 -93865701 + Lx2B LINE L1 4668 4727 -1150 1 658 315 0 0 0 chr15 9629273 9629308 -93865666 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 658 8600 138 18 12 chr15 9629308 9631551 -93863423 + Lx2B LINE L1 4728 6998 -2 1 658 216 0 0 0 chr15 9631594 9631618 -93863356 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 1 658 357 24 0 0 chr15 9632053 9632095 -93862879 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 658 972 81 22 0 chr15 9632228 9632364 -93862610 + B1_Mus2 SINE Alu 1 139 -8 1 658 297 0 0 0 chr15 9632364 9632397 -93862577 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 658 1365 43 112 0 chr15 9632397 9632584 -93862390 - L1Md_F2 LINE L1 -262 6320 6113 1 658 406 121 0 21 chr15 9632585 9632678 -93862296 + L1Md_F2 LINE L1 6492 6582 0 1 658 993 127 0 0 chr15 9632702 9632859 -93862115 + (GAAA)n Simple_repeat Simple_repeat 2 158 0 1 658 21 82 0 0 chr15 9633594 9633643 -93861331 + AT_rich Low_complexity Low_complexity 1 49 0 1 658 283 302 60 16 chr15 9635097 9635279 -93859695 + L1MB4 LINE L1 5840 6029 -151 1 658 297 0 0 0 chr15 9635561 9635594 -93859380 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 658 364 37 37 0 chr15 9635831 9635885 -93859089 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 658 324 288 68 0 chr15 9636018 9636136 -93858838 + Lx9 LINE L1 6974 7099 -545 1 658 505 302 122 24 chr15 9636143 9636520 -93858454 - L1MDa LINE L1 -441 6192 5779 1 658 426 121 0 0 chr15 9636759 9636825 -93858149 + (TCC)n Simple_repeat Simple_repeat 2 67 0 1 658 555 316 94 10 chr15 9637133 9637526 -93857448 - L1MDa LINE L1 -966 5571 5146 1 658 475 247 37 103 chr15 9637613 9637961 -93857013 - L1MDa LINE L1 -2492 4045 3721 1 658 324 0 0 0 chr15 9637978 9638014 -93856960 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 658 856 57 16 0 chr15 9638020 9638139 -93856835 - B1_Mm SINE Alu -7 141 4 1 658 581 244 58 29 chr15 9638150 9638458 -93856516 - L1MDa LINE L1 -3012 3525 3209 1 658 232 247 276 23 chr15 9638444 9638618 -93856356 - Lx8 LINE L1 -1 7472 7255 1 658 571 269 114 33 chr15 9638726 9639165 -93855809 - L1MDa LINE L1 -3760 2777 2280 1 658 270 0 0 0 chr15 9639165 9639195 -93855779 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 1 658 430 301 156 56 chr15 9639195 9639566 -93855408 - L1MDa LINE L1 -4354 2279 1923 1 658 625 311 19 9 chr15 9639566 9639780 -93855194 - B3 SINE B2 0 216 1 1 658 430 301 156 56 chr15 9639780 9640102 -93854872 - L1MDa LINE L1 -4711 1922 1542 1 658 702 259 106 10 chr15 9640514 9640807 -93854167 - L1MDa LINE L1 -5176 1457 1137 1 658 409 309 60 139 chr15 9640807 9641160 -93853814 - MLT1C LTR MaLR 0 467 66 1 658 232 316 136 0 chr15 9641188 9641365 -93853609 - L1MDa LINE L1 -5492 1141 941 1 658 310 305 92 7 chr15 9641623 9641765 -93853209 - L1MDa LINE L1 -6161 472 319 1 658 244 344 68 11 chr15 9641811 9642002 -93852972 - L1MDa LINE L1 -6404 229 28 1 658 242 116 0 23 chr15 9644463 9644507 -93850467 + (TCCC)n Simple_repeat Simple_repeat 4 46 0 1 658 237 22 43 43 chr15 9645092 9645139 -93849835 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 1 658 251 254 0 66 chr15 9645368 9645444 -93849530 + L1MD3 LINE L1 6703 6773 -1222 2 658 330 315 117 50 chr15 9645636 9645977 -93848997 + L1MC4 LINE L1 1422 1785 -4430 2 658 417 20 0 0 chr15 9646417 9646467 -93848507 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 658 339 25 0 0 chr15 9646830 9646870 -93848104 + (TTG)n Simple_repeat Simple_repeat 3 42 0 2 658 62 36 0 0 chr15 9648524 9648607 -93846367 + AT_rich Low_complexity Low_complexity 1 83 0 2 658 4890 139 18 6 chr15 9648654 9649448 -93845526 - Lx2 LINE L1 -1 6996 6194 2 658 378 122 61 0 chr15 9649448 9649530 -93845444 + Lx2 LINE L1 6073 6159 -838 2 658 485 275 7 14 chr15 9649739 9649879 -93845095 + B1_Mur1 SINE Alu 4 142 -7 2 658 534 31 0 0 chr15 9650896 9650960 -93844014 + (TC)n Simple_repeat Simple_repeat 2 65 0 2 658 620 42 42 0 chr15 9650963 9651059 -93843915 + (CA)n Simple_repeat Simple_repeat 2 101 0 2 658 21 0 0 0 chr15 9651164 9651185 -93843789 + AT_rich Low_complexity Low_complexity 1 21 0 2 658 207 0 0 0 chr15 9651480 9651503 -93843471 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 658 611 315 150 17 chr15 9651515 9652161 -93842813 + L1M2 LINE L1 4471 5202 -941 2 658 1860 137 19 16 chr15 9652510 9652822 -93842152 - Lx LINE L1 0 6654 6342 2 658 351 0 0 0 chr15 9653656 9653695 -93841279 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 658 29 0 0 0 chr15 9655574 9655603 -93839371 + AT_rich Low_complexity Low_complexity 1 29 0 2 658 1064 103 7 0 chr15 9655613 9655759 -93839215 + B1_Mus2 SINE Alu 1 147 0 2 658 782 35 18 0 chr15 9656010 9656123 -93838851 + L1Md_F2 LINE L1 6468 6582 0 2 658 193 319 55 14 chr15 9656637 9656710 -93838264 + L3 LINE CR1 2655 2730 -1759 2 658 215 274 48 0 chr15 9657878 9657940 -93837034 + L2c LINE L2 3321 3385 -2 2 658 23 0 0 0 chr15 9659825 9659848 -93835126 + AT_rich Low_complexity Low_complexity 1 23 0 2 658 24 53 0 0 chr15 9660173 9660211 -93834763 + AT_rich Low_complexity Low_complexity 1 38 0 2 658 610 276 50 10 chr15 9660347 9660548 -93834426 + B3 SINE B2 1 209 -7 2 658 1016 104 0 0 chr15 9660838 9660982 -93833992 - B2_Mm2 SINE B2 -46 149 6 2 658 763 246 45 20 chr15 9662045 9662244 -93832730 - MTC LTR MaLR -8 413 210 2 658 296 305 163 8 chr15 9662257 9662386 -93832588 - MER2 DNA MER2_type -4 341 193 2 658 876 258 132 31 chr15 9662633 9662892 -93832082 - MTD LTR MaLR 0 419 126 2 658 357 24 0 0 chr15 9662892 9662934 -93832040 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2 658 876 224 36 5 chr15 9662934 9662999 -93831975 - MTD LTR MaLR -294 125 8 2 658 851 214 11 28 chr15 9663265 9663443 -93831531 + ORR1D1 LTR MaLR 7 181 -193 2 658 681 201 14 14 chr15 9663443 9663765 -93831209 + CT-rich Low_complexity Low_complexity 1 322 0 2 658 773 208 57 81 chr15 9663776 9663985 -93830989 + ORR1D1 LTR MaLR 171 374 0 2 658 189 147 0 0 chr15 9664198 9664232 -93830742 + (CAA)n Simple_repeat Simple_repeat 2 35 0 2 658 351 0 0 0 chr15 9664627 9664666 -93830308 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 658 760 304 33 24 chr15 9665032 9665187 -93829787 + B4 SINE B4 56 213 -79 2 658 182 37 37 0 chr15 9665187 9665214 -93829760 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 2 658 760 304 33 24 chr15 9665214 9665270 -93829704 + B4 SINE B4 214 267 -25 2 658 549 0 0 0 chr15 9665271 9665332 -93829642 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 658 183 80 0 0 chr15 9665442 9665467 -93829507 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 658 1087 300 110 15 chr15 9665493 9666082 -93828892 + Lx7 LINE L1 6657 7301 -395 2 658 27 29 0 0 chr15 9666202 9666236 -93828738 + AT_rich Low_complexity Low_complexity 1 34 0 2 658 378 0 0 0 chr15 9666458 9666500 -93828474 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 658 480 289 173 45 chr15 9666888 9667060 -93827914 + L1M4 LINE L1 855 1019 -5523 2 658 1025 216 108 41 chr15 9667060 9667275 -93827699 + ORR1D2 LTR MaLR 1 240 -130 2 658 1181 27 0 57 chr15 9667275 9668048 -93826926 + (CCTG)n Simple_repeat Simple_repeat 1 728 0 2 658 1025 216 108 41 chr15 9668048 9668170 -93826804 + ORR1D2 LTR MaLR 241 363 -7 2 658 480 289 173 45 chr15 9668170 9668424 -93826550 + L1M4 LINE L1 1020 1333 -5209 2 658 245 272 78 42 chr15 9668479 9668621 -93826353 + L1M4 LINE L1 1342 1488 -5054 2 658 292 280 74 5 chr15 9668621 9668972 -93826002 + L1M4 LINE L1 5599 5971 -711 2 658 264 236 11 22 chr15 9668974 9669065 -93825909 + Lx7 LINE L1 7607 7696 0 2 658 360 220 121 77 chr15 9669143 9669325 -93825649 + L1MB5 LINE L1 5705 5894 -280 2 658 195 129 0 0 chr15 9669597 9669628 -93825346 + (TAA)n Simple_repeat Simple_repeat 2 32 0 2 658 726 235 38 29 chr15 9669685 9669895 -93825079 + B3 SINE B2 2 213 -3 2 658 682 176 0 13 chr15 9669908 9670063 -93824911 + GA-rich Low_complexity Low_complexity 2 154 0 2 658 770 270 60 124 chr15 9670891 9671457 -93823517 + L1_Rod LINE L1 5279 5808 -39 2 658 1462 114 36 28 chr15 9672424 9672677 -93822297 - Lx2 LINE L1 0 6997 6743 2 658 6506 103 38 3 chr15 9672899 9674134 -93820840 + L1_Mus3 LINE L1 4818 6075 -563 2 658 941 321 56 19 chr15 9674190 9674621 -93820353 + Lx7 LINE L1 6870 7316 -380 2 658 213 149 21 0 chr15 9674738 9674785 -93820189 + A-rich Low_complexity Low_complexity 3 50 0 2 658 226 0 29 29 chr15 9675346 9675381 -93819593 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2 658 229 108 44 88 chr15 9675700 9675791 -93819183 + (TTATA)n Simple_repeat Simple_repeat 5 91 0 2 658 248 53 26 0 chr15 9676012 9676050 -93818924 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 2 658 261 0 0 0 chr15 9676051 9676080 -93818894 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 658 210 293 63 51 chr15 9676496 9676575 -93818399 - MIR SINE MIR -22 240 161 2 658 24 32 0 0 chr15 9676729 9676760 -93818214 + AT_rich Low_complexity Low_complexity 1 31 0 2 658 2299 15 0 7 chr15 9678762 9679035 -93815939 + L1Md_T LINE L1 6312 6582 0 2 658 216 0 0 0 chr15 9679051 9679075 -93815899 + (A)n Simple_repeat Simple_repeat 1 24 0 2 658 21 0 0 0 chr15 9679287 9679308 -93815666 + AT_rich Low_complexity Low_complexity 1 21 0 2 658 216 336 89 32 chr15 9679358 9679481 -93815493 + MIRb SINE MIR 68 197 -71 2 658 734 312 27 10 chr15 9681158 9681453 -93813521 + L1_Rod LINE L1 5502 5801 -46 2 658 1980 280 101 50 chr15 9681465 9682364 -93812610 + Lx8 LINE L1 6271 7215 -258 2 658 360 0 0 0 chr15 9682770 9682810 -93812164 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 658 738 176 68 8 chr15 9682972 9683104 -93811870 + B1_Mur3 SINE Alu 4 143 -6 2 658 309 109 0 0 chr15 9683407 9683453 -93811521 + (TTA)n Simple_repeat Simple_repeat 3 48 0 2 658 513 331 84 0 chr15 9683465 9683607 -93811367 - RSINE1 SINE B4 -10 155 2 2 658 611 289 31 47 chr15 9684929 9684983 -93809991 - B3A SINE B2 -2 193 142 2 658 594 51 0 0 chr15 9684983 9685061 -93809913 + (TG)n Simple_repeat Simple_repeat 1 78 0 2 658 611 286 33 11 chr15 9685061 9685213 -93809761 - B3A SINE B2 -44 154 1 2 658 351 283 74 11 chr15 9685413 9685602 -93809372 - L1MCb LINE L1 -5311 734 534 2 658 585 196 0 29 chr15 9686081 9686254 -93808720 + GA-rich Low_complexity Low_complexity 5 172 0 2 658 467 370 82 24 chr15 9686933 9687188 -93807786 + B4A SINE B4 17 286 -6 2 658 229 273 18 0 chr15 9687196 9687251 -93807723 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 658 674 314 113 66 chr15 9687365 9687727 -93807247 - MTEa LTR MaLR 0 379 1 2 658 1650 263 88 14 chr15 9687908 9688398 -93806576 + Lx6 LINE L1 6925 7450 -10 2 658 14785 142 9 7 chr15 9689470 9692908 -93802066 - L1_Mus4 LINE L1 0 6636 3195 2 658 4927 110 8 4 chr15 9692908 9693638 -93801336 + Lx3A LINE L1 6247 6979 -2 2 658 324 48 0 0 chr15 9693814 9693856 -93801118 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 658 3707 74 0 2 chr15 9694704 9695180 -93799794 - L1_Mus1 LINE L1 -1 6566 6092 2 658 373 303 48 27 chr15 9695544 9695690 -93799284 - MER77 LTR ERVL -14 593 445 2 658 32 43 0 0 chr15 9696131 9696177 -93798797 + AT_rich Low_complexity Low_complexity 1 46 0 2 658 956 50 0 0 chr15 9696507 9696627 -93798347 + B1_Mm SINE Alu 28 147 0 2 658 845 249 46 0 chr15 9697115 9697312 -93797662 - B3 SINE B2 -10 206 1 2 658 503 363 31 93 chr15 9697452 9697741 -93797233 - MLT1F2 LTR MaLR -19 541 271 2 658 326 247 124 0 chr15 9698756 9698853 -93796121 + PB1D10 SINE Alu 1 109 -8 2 658 237 377 0 0 chr15 9698867 9698944 -93796030 + ID4 SINE ID 6 82 -1 2 82 1393 295 103 5 chr15 9699232 9699805 -93795169 + Lx8 LINE L1 6808 7436 -37 2 659 281 309 49 0 chr15 9700717 9700879 -93794095 - L1MC LINE L1 -2273 3873 3704 2 659 5821 72 1 8 chr15 9701106 9702017 -93792957 - Lx3_Mus LINE L1 -1033 5976 5076 2 659 945 148 16 0 chr15 9702015 9702198 -93792776 + Lx3_Mus LINE L1 6021 6206 -803 2 659 2058 136 143 30 chr15 9702198 9702562 -93792412 + RLTR44A LTR ERVK 1 405 0 2 659 352 143 0 0 chr15 9702562 9702618 -93792356 + RLTR44-int LTR ERVK 1 56 -2756 2 659 616 167 0 0 chr15 9702628 9702736 -93792238 + RLTR44-int LTR ERVK 874 981 -1831 2 659 3864 312 45 47 chr15 9702914 9707739 -93787235 + RLTR44-int LTR ERVK 658 5118 -1424 2 659 5441 35 0 1 chr15 9707947 9708612 -93786362 + RLTR44-int LTR ERVK 2142 2805 -7 2 659 2008 138 140 30 chr15 9708619 9708984 -93785990 + RLTR44A LTR ERVK 1 405 0 2 659 5943 94 2 0 chr15 9708984 9709783 -93785191 + Lx3_Mus LINE L1 6200 7000 -9 2 659 3019 22 43 0 chr15 9709815 9710186 -93784788 - MTA_Mm LTR MaLR 0 396 10 2 659 2271 85 6 6 chr15 9710246 9710565 -93784409 + L1_Mus3 LINE L1 6320 6638 0 2 659 829 208 13 7 chr15 9710566 9710721 -93784253 - URR1B DNA MER1_type -69 156 1 2 659 872 214 64 12 chr15 9711282 9711533 -93783441 + Lx9 LINE L1 7370 7633 -11 2 659 540 268 94 29 chr15 9711841 9712149 -93782825 + Charlie1b DNA MER1_type 86 413 -110 2 659 1491 246 35 66 chr15 9712446 9712873 -93782101 - Lx6 LINE L1 -10 7450 7037 2 659 1363 176 72 10 chr15 9712885 9713189 -93781785 - Lx4B LINE L1 -4 7054 6732 2 659 577 263 39 34 chr15 9713194 9713337 -93781637 - Lx6 LINE L1 -432 7028 6881 2 659 783 92 0 0 chr15 9713337 9713468 -93781506 + (TC)n Simple_repeat Simple_repeat 1 131 0 2 659 577 263 39 34 chr15 9713468 9713529 -93781445 - Lx6 LINE L1 -580 6880 6823 2 659 342 325 8 16 chr15 9713862 9713984 -93780990 + MLT1A1 LTR MaLR 9 129 -279 2 659 358 342 39 91 chr15 9714011 9714320 -93780654 + ORR1E LTR MaLR 67 359 0 3 659 195 346 19 0 chr15 9714477 9714529 -93780445 + MIR SINE MIR 16 68 -194 3 659 1878 273 10 59 chr15 9714855 9715447 -93779527 - RMER19C LTR ERVK 0 611 49 3 659 24 32 0 0 chr15 9715670 9715701 -93779273 + AT_rich Low_complexity Low_complexity 1 31 0 3 659 964 49 0 0 chr15 9716759 9716881 -93778093 + L1Md_F2 LINE L1 5980 6101 -481 3 659 277 386 14 28 chr15 9716948 9717092 -93777882 - L2 LINE L2 -3262 157 16 3 659 396 299 78 18 chr15 9718582 9718749 -93776225 - L1M5 LINE L1 -456 5668 5492 3 659 28 29 0 0 chr15 9719118 9719153 -93775821 + AT_rich Low_complexity Low_complexity 1 35 0 3 659 34 72 0 0 chr15 9719246 9719315 -93775659 + AT_rich Low_complexity Low_complexity 1 69 0 3 659 3842 97 0 33 chr15 9719905 9720482 -93774492 - L1_Mus3 LINE L1 -7 6631 6074 3 659 644 95 60 8 chr15 9720482 9720599 -93774375 - Lx LINE L1 -279 6375 6253 3 659 35 41 0 0 chr15 9720609 9720658 -93774316 + AT_rich Low_complexity Low_complexity 1 49 0 3 659 2478 176 45 4 chr15 9720813 9721282 -93773692 + Lx5 LINE L1 6149 6636 -414 3 659 339 324 154 84 chr15 9721625 9721925 -93773049 - MLT1E LTR MaLR -31 622 291 3 659 224 100 0 24 chr15 9723010 9723051 -93771923 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 659 426 85 0 0 chr15 9723201 9723260 -93771714 - B2_Mm2 SINE B2 -135 60 2 3 659 257 257 0 63 chr15 9723262 9723341 -93771633 - RLTR11A LTR ERVK -80 448 375 3 659 315 305 77 49 chr15 9723673 9723856 -93771118 + MLT1F1 LTR MaLR 379 566 -3 3 659 3275 48 2 5 chr15 9724471 9724868 -93770106 + MTA_Mm LTR MaLR 1 396 0 3 659 272 300 161 52 chr15 9725851 9726062 -93768912 + L2 LINE L2 1580 1813 -1606 3 659 239 213 0 0 chr15 9726247 9726294 -93768680 - MTC LTR MaLR 0 421 375 3 659 378 302 14 7 chr15 9726292 9726432 -93768542 + RCHARR1 DNA MER1_type 799 939 -35 3 659 450 0 0 0 chr15 9726490 9726540 -93768434 + (CATA)n Simple_repeat Simple_repeat 4 53 0 3 659 28 29 0 0 chr15 9727036 9727071 -93767903 + AT_rich Low_complexity Low_complexity 1 35 0 3 659 240 35 0 0 chr15 9727556 9727585 -93767389 + (TCC)n Simple_repeat Simple_repeat 2 30 0 3 659 606 275 26 88 chr15 9727622 9727849 -93767125 - B3 SINE B2 -3 213 1 3 659 305 158 48 13 chr15 9728585 9728666 -93766308 - ORR1C2 LTR MaLR -12 372 228 3 659 14776 90 36 0 chr15 9728687 9731657 -93763317 + L1_Mus1 LINE L1 3475 6565 -2 3 659 5511 97 0 4 chr15 9731666 9732436 -93762538 + L1_Mus4 LINE L1 5862 6628 -8 3 659 684 251 73 92 chr15 9732462 9732752 -93762222 - ORR1D1 LTR MaLR -71 296 2 3 659 2477 47 3 21 chr15 9732925 9733254 -93761720 + IAPEY2_LTR LTR ERVK 32 354 -3 3 659 287 365 121 18 chr15 9734267 9734490 -93760484 - LTR16A1 LTR ERVL -34 422 177 3 659 26 30 0 0 chr15 9734791 9734824 -93760150 + AT_rich Low_complexity Low_complexity 1 33 0 3 659 845 90 115 0 chr15 9734828 9734950 -93760024 - B1_Mus1 SINE Alu -5 143 8 3 659 29 47 0 0 chr15 9734950 9734993 -93759981 + AT_rich Low_complexity Low_complexity 1 43 0 3 659 288 0 0 0 chr15 9735133 9735165 -93759809 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 659 327 25 0 0 chr15 9735165 9735205 -93759769 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 659 282 350 7 0 chr15 9735209 9735349 -93759625 - Lx9 LINE L1 -220 7424 7284 3 659 1052 227 31 18 chr15 9735520 9735749 -93759225 - ORR1D1 LTR MaLR -142 232 1 3 659 213 39 0 0 chr15 9735942 9735968 -93759006 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 3 659 570 298 126 91 chr15 9736616 9736989 -93757985 - MLT1D LTR MaLR -2 503 118 3 659 353 308 130 33 chr15 9737075 9737129 -93757845 + Lx8 LINE L1 6127 6185 -1288 3 659 384 22 0 0 chr15 9737129 9737174 -93757800 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 659 353 308 130 33 chr15 9737174 9737418 -93757556 + Lx8 LINE L1 6186 6453 -1020 3 659 340 307 57 55 chr15 9737418 9737605 -93757369 - MLT1D LTR MaLR -435 192 5 3 659 246 319 43 14 chr15 9739275 9739345 -93755629 - ID4 SINE ID -6 77 6 3 659 2419 80 9 6 chr15 9740157 9740483 -93754491 + ORR1A2 LTR MaLR 1 327 0 3 659 241 361 76 8 chr15 9740516 9740647 -93754327 - MIR SINE MIR -46 216 77 3 659 6615 22 1 0 chr15 9740832 9741637 -93753337 + L1Md_A LINE L1 4781 5586 -297 3 659 8765 17 0 0 chr15 9741637 9742632 -93752342 + L1Md_A LINE L1 5587 6581 -1 3 659 2933 16 2 129 chr15 9743066 9743486 -93751488 - IAPLTR1_Mm LTR ERVK 0 367 1 3 659 2712 35 0 6 chr15 9743511 9743525 -93751449 + L1Md_T LINE L1 5673 5685 -897 3 659 4745 44 0 0 chr15 9743525 9744094 -93750880 - L1Md_T LINE L1 0 6582 6014 3 659 2712 228 54 75 chr15 9744094 9745443 -93749531 + L1Md_T LINE L1 5686 7000 0 3 659 24 0 0 0 chr15 9745850 9745874 -93749100 + AT_rich Low_complexity Low_complexity 1 24 0 3 659 18855 143 57 17 chr15 9746267 9749658 -93745316 - Lx4B LINE L1 -2 7231 3652 3 659 383 52 17 0 chr15 9749658 9749716 -93745258 + (TTTTA)n Simple_repeat Simple_repeat 2 60 0 3 659 18855 139 65 12 chr15 9749716 9751054 -93743920 - Lx4B LINE L1 -2401 3651 2310 3 659 491 0 17 0 chr15 9751080 9751139 -93743835 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 3 659 22 0 0 0 chr15 9751838 9751860 -93743114 + AT_rich Low_complexity Low_complexity 1 22 0 3 659 22 56 0 0 chr15 9752077 9752113 -93742861 + AT_rich Low_complexity Low_complexity 1 36 0 3 659 986 314 18 18 chr15 9752132 9752417 -93742557 + B4A SINE B4 6 290 -2 3 659 184 114 68 0 chr15 9752420 9752464 -93742510 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 3 659 385 314 63 38 chr15 9753140 9753299 -93741675 + Charlie10 DNA MER1_type 1278 1440 -1382 3 659 481 275 36 14 chr15 9753388 9753528 -93741446 - Lx7 LINE L1 -928 6768 6626 3 659 372 323 117 47 chr15 9753528 9753761 -93741213 - MTC-int LTR MaLR -8 1250 1000 3 659 1365 19 0 0 chr15 9753761 9753921 -93741053 + (GGGAGA)n Simple_repeat Simple_repeat 4 163 0 3 659 372 323 117 47 chr15 9753921 9754090 -93740884 - MTC-int LTR MaLR -259 999 820 3 659 1251 174 0 44 chr15 9754090 9754176 -93740798 + Lx4B LINE L1 4549 4632 -1245 3 659 261 98 0 0 chr15 9754176 9754217 -93740757 + (CAA)n Simple_repeat Simple_repeat 2 42 0 3 659 1251 174 0 44 chr15 9754217 9754246 -93740728 + Lx4B LINE L1 4633 4656 -1221 3 659 257 0 30 0 chr15 9754246 9754279 -93740695 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 3 659 1251 174 0 44 chr15 9754279 9754432 -93740542 + Lx4B LINE L1 4657 4805 -1072 3 659 3778 139 59 6 chr15 9754430 9755220 -93739754 + Lx4B LINE L1 5093 5950 -1108 3 659 28 61 0 0 chr15 9755243 9755292 -93739682 + AT_rich Low_complexity Low_complexity 1 49 0 3 659 409 280 19 9 chr15 9755818 9755926 -93739048 - PB1D10 SINE Alu -7 110 2 3 659 448 332 95 27 chr15 9756290 9756584 -93738390 + MLT1E2 LTR MaLR 270 583 -44 3 659 2835 98 5 19 chr15 9757461 9757876 -93737098 + RLTR9E LTR ERVK 1 409 0 3 659 5872 103 2 4 chr15 9758015 9758837 -93736137 + L1_Mus4 LINE L1 5800 6620 -16 3 659 720 0 0 0 chr15 9758837 9758917 -93736057 + (GAA)n Simple_repeat Simple_repeat 1 80 0 3 659 2151 301 78 27 chr15 9758923 9759878 -93735096 - Lx8 LINE L1 -153 7320 6317 3 659 24 0 0 0 chr15 9760029 9760053 -93734921 + AT_rich Low_complexity Low_complexity 1 24 0 3 659 21 57 0 0 chr15 9760165 9760200 -93734774 + AT_rich Low_complexity Low_complexity 1 35 0 3 659 550 205 8 0 chr15 9760254 9760376 -93734598 + Lx5 LINE L1 6927 7049 -1 3 659 189 0 0 0 chr15 9760385 9760406 -93734568 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 3 659 3973 157 35 11 chr15 9761851 9762566 -93732408 - Lx2B LINE L1 -4 6996 6265 3 659 216 0 0 0 chr15 9762670 9762694 -93732280 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 3 659 300 313 30 22 chr15 9763866 9764038 -93730936 + L1M3 LINE L1 5087 5256 -887 3 659 736 285 181 18 chr15 9764037 9764533 -93730441 + L1_Mur3 LINE L1 5285 5861 -19 3 659 272 244 24 24 chr15 9765324 9765408 -93729566 + RLTR42-int LTR ERVK 1236 1319 -4203 3 659 269 64 0 41 chr15 9765436 9765485 -93729489 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 3 659 237 65 0 0 chr15 9765629 9765660 -93729314 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 659 1039 274 4 11 chr15 9766686 9766963 -93728011 + MT2A LTR ERVL 215 489 -44 3 659 185 145 65 0 chr15 9766985 9767047 -93727927 + (TA)n Simple_repeat Simple_repeat 1 66 0 3 659 249 133 13 39 chr15 9767052 9767130 -93727844 + MT2A LTR ERVL 458 533 0 3 659 223 139 0 44 chr15 9767183 9767228 -93727746 + T-rich Low_complexity Low_complexity 6 48 0 3 659 2370 140 18 114 chr15 9767408 9767545 -93727429 + RLTR11B LTR ERVK 1 137 -316 3 659 522 0 0 0 chr15 9767545 9767603 -93727371 + (GAAAA)n Simple_repeat Simple_repeat 2 59 0 3 659 2370 140 18 114 chr15 9767603 9767966 -93727008 + RLTR11B LTR ERVK 138 452 -1 3 659 4728 181 53 2 chr15 9768049 9768950 -93726024 + Lx2B LINE L1 6054 7000 0 3 659 605 264 151 67 chr15 9769283 9769653 -93725321 + Lx9 LINE L1 7011 7431 -213 3 659 6548 53 60 2 chr15 9769653 9770496 -93724478 - RLTR13B1 LTR ERVK -1 892 1 3 659 605 264 151 67 chr15 9770496 9770693 -93724281 + Lx9 LINE L1 7432 7626 -18 3 659 23 0 0 0 chr15 9770711 9770734 -93724240 + AT_rich Low_complexity Low_complexity 1 23 0 3 659 504 222 0 0 chr15 9771196 9771376 -93723598 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 659 480 286 43 104 chr15 9771713 9771924 -93723050 - B3A SINE B2 0 198 1 3 659 264 382 88 16 chr15 9772151 9772276 -93722698 - MLT1G LTR MaLR -435 156 23 3 659 351 0 0 0 chr15 9772758 9772797 -93722177 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 659 281 234 107 27 chr15 9773292 9773441 -93721533 - L1MB1 LINE L1 -123 6066 5906 3 659 1409 53 11 0 chr15 9773978 9774166 -93720808 - L1Md_F2 LINE L1 -12 6570 6381 3 659 417 38 0 0 chr15 9774166 9774219 -93720755 - L1Md_F2 LINE L1 -366 6216 6164 3 659 614 235 7 7 chr15 9774341 9774495 -93720479 - Lx7 LINE L1 -393 7303 7150 3 659 2219 134 29 6 chr15 9774497 9774843 -93720131 - ORR1B1 LTR MaLR 0 394 41 4 659 1559 248 11 8 chr15 9774851 9775225 -93719749 - Lx7 LINE L1 -545 7151 6777 3 659 388 315 34 42 chr15 9775223 9775488 -93719486 + Lx7 LINE L1 5945 6207 -1489 4 659 416 222 9 0 chr15 9775545 9775653 -93719321 + (TA)n Simple_repeat Simple_repeat 1 109 0 4 659 442 236 36 24 chr15 9775956 9776121 -93718853 - L1M2 LINE L1 -794 5497 5331 4 659 400 360 17 22 chr15 9776614 9776793 -93718181 + RMER5 LTR ERV1 345 522 -12 4 659 278 383 33 0 chr15 9777130 9777250 -93717724 - L1M3de LINE L1 -5245 1408 1285 4 659 399 162 0 0 chr15 9777810 9777890 -93717084 + (TG)n Simple_repeat Simple_repeat 1 80 0 4 659 522 220 14 14 chr15 9777892 9778035 -93716939 + RMER1A Other Other 876 1018 -12 4 659 451 201 201 0 chr15 9778045 9778214 -93716760 + Lx9 LINE L1 7411 7613 -31 4 659 1678 162 81 21 chr15 9778214 9778383 -93716591 + RMER17C LTR ERVK 1 183 -227 4 659 897 123 0 0 chr15 9778383 9778562 -93716412 + (TC)n Simple_repeat Simple_repeat 2 180 0 4 659 1678 162 81 21 chr15 9778562 9778777 -93716197 + RMER17C LTR ERVK 184 408 -2 4 659 234 0 0 0 chr15 9779409 9779435 -93715539 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 659 288 0 0 0 chr15 9779578 9779610 -93715364 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 659 30 27 0 0 chr15 9780199 9780236 -93714738 + AT_rich Low_complexity Low_complexity 1 37 0 4 659 477 269 48 5 chr15 9780638 9780825 -93714149 - L1MA4 LINE L1 -360 5940 5746 4 659 230 216 0 19 chr15 9780916 9780968 -93714006 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 659 318 256 0 13 chr15 9781141 9781245 -93713729 - L1M4 LINE L1 -804 5436 5336 4 659 1127 68 0 26 chr15 9782368 9782520 -93712454 + B1_Mus1 SINE Alu 1 148 0 4 659 30 0 0 0 chr15 9782522 9782552 -93712422 + AT_rich Low_complexity Low_complexity 1 30 0 4 659 2231 52 14 3 chr15 9782815 9783106 -93711868 - L1_Mus2 LINE L1 -1 6565 6272 4 659 280 54 0 0 chr15 9783106 9783143 -93711831 + L1_Mus2 LINE L1 6242 6278 -289 4 659 267 315 56 65 chr15 9783218 9783432 -93711542 + L1M5 LINE L1 5395 5606 -634 4 659 1442 285 145 50 chr15 9784083 9784937 -93710037 - Lx8 LINE L1 -25 7448 6514 4 659 326 293 63 87 chr15 9785496 9785623 -93709351 + MLT1A0 LTR MaLR 3 126 -239 4 659 25 0 0 0 chr15 9785937 9785962 -93709012 + AT_rich Low_complexity Low_complexity 1 25 0 4 659 384 330 0 27 chr15 9786597 9786709 -93708265 + PB1 SINE Alu 12 120 -7 4 659 257 345 50 0 chr15 9787433 9787552 -93707422 + ORR1E LTR MaLR 9 133 -226 4 659 814 226 68 49 chr15 9788577 9788903 -93706071 - Lx7 LINE L1 0 7696 7365 4 659 745 117 0 14 chr15 9788914 9789062 -93705912 + (GAA)n Simple_repeat Simple_repeat 1 146 0 4 659 225 0 0 0 chr15 9789059 9789084 -93705890 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 659 5095 230 57 39 chr15 9789084 9790407 -93704567 - Lx7 LINE L1 -360 7336 5989 4 659 414 0 0 0 chr15 9790527 9790573 -93704401 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 659 540 351 11 0 chr15 9790589 9790763 -93704211 - B3 SINE B2 0 216 41 4 659 1211 48 0 0 chr15 9791255 9791402 -93703572 + B1_Mus1 SINE Alu 2 148 0 4 659 216 0 0 0 chr15 9791452 9791476 -93703498 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 659 323 27 67 27 chr15 9792404 9792479 -93702495 + (CA)n Simple_repeat Simple_repeat 2 79 0 4 659 327 25 0 0 chr15 9792593 9792633 -93702341 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 4 659 900 0 0 0 chr15 9793649 9793749 -93701225 + (CTTTG)n Simple_repeat Simple_repeat 5 104 0 4 659 22 0 0 0 chr15 9794079 9794101 -93700873 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 441 335 140 47 chr15 9794668 9795075 -93699899 - MLT2B2 LTR ERVL -61 454 10 4 659 281 103 0 33 chr15 9795238 9795298 -93699676 + (CAGAGA)n Simple_repeat Simple_repeat 3 60 0 4 659 193 365 0 0 chr15 9795347 9795399 -93699575 - MER5A DNA MER1_type -69 120 69 4 659 183 306 0 0 chr15 9796056 9796105 -93698869 + MER5B DNA MER1_type 130 178 0 4 659 353 227 0 0 chr15 9796485 9796551 -93698423 - B3A SINE B2 -125 73 8 4 659 630 176 0 0 chr15 9796551 9796670 -93698304 + CT-rich Low_complexity Low_complexity 2 120 0 4 659 695 82 41 0 chr15 9796674 9796771 -93698203 - B1_Mus2 SINE Alu 0 147 47 4 659 234 125 188 0 chr15 9796732 9796780 -93698194 - 4.5SRNA scRNA scRNA -8 86 30 4 659 239 71 24 0 chr15 9797211 9797253 -93697721 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 659 283 206 48 0 chr15 9798517 9798580 -93696394 + L1MC4 LINE L1 6849 6914 -1128 4 659 216 135 0 0 chr15 9800849 9800886 -93694088 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 4 659 662 45 22 0 chr15 9800886 9800975 -93693999 + (CATA)n Simple_repeat Simple_repeat 2 92 0 4 659 730 328 51 7 chr15 9801829 9802102 -93692872 + B4A SINE B4 1 285 -7 4 659 6017 83 10 0 chr15 9802331 9803129 -93691845 - L1_Mus1 LINE L1 -2 6565 5760 4 659 5636 98 5 17 chr15 9803129 9804008 -93690966 - L1Md_F LINE L1 -3759 2124 1257 4 659 2478 186 41 62 chr15 9804007 9805101 -93689873 - L1Md_F LINE L1 -5316 1322 220 4 659 1127 169 4 64 chr15 9805109 9805343 -93689631 - URR1B DNA MER1_type -3 222 3 4 659 189 0 0 0 chr15 9805432 9805453 -93689521 + (TAA)n Simple_repeat Simple_repeat 1 21 0 4 659 286 307 58 19 chr15 9805847 9805950 -93689024 + Cheshire DNA MER1_type 178 284 -2136 4 659 288 277 143 6 chr15 9806332 9806449 -93688525 + MLT1B LTR MaLR 240 357 -33 4 659 249 33 0 0 chr15 9806583 9806613 -93688361 + (CAAAC)n Simple_repeat Simple_repeat 1 30 0 4 659 2728 44 3 3 chr15 9806867 9807207 -93687767 - L1Md_F2 LINE L1 0 6582 6243 4 659 3510 55 0 1 chr15 9807207 9807665 -93687309 - L1Md_F2 LINE L1 -580 6002 5551 4 659 345 262 0 0 chr15 9807819 9807880 -93687094 + ORR1E LTR MaLR 30 90 -269 4 659 840 309 33 17 chr15 9807881 9808180 -93686794 + Lx9 LINE L1 6618 6921 -723 4 659 998 317 51 27 chr15 9808179 9808772 -93686202 + Lx9 LINE L1 6886 7624 -20 4 659 2687 303 75 16 chr15 9810040 9810536 -93684438 + Lx8 LINE L1 6384 6909 -564 4 659 477 0 0 0 chr15 9810536 9810589 -93684385 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 659 360 0 0 0 chr15 9810589 9810628 -93684346 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 659 2687 303 75 16 chr15 9810628 9810846 -93684128 + Lx8 LINE L1 6910 7154 -319 4 659 827 259 148 30 chr15 9810846 9811177 -93683797 + ORR1D2 LTR MaLR 1 370 0 4 659 2687 303 75 16 chr15 9811177 9811489 -93683485 + Lx8 LINE L1 7155 7471 -2 4 659 3160 84 34 2 chr15 9811995 9812437 -93682537 - L1_Mus1 LINE L1 0 6567 6112 4 659 2959 77 20 0 chr15 9812438 9812830 -93682144 + L1Md_F2 LINE L1 5717 6116 -466 4 659 420 350 76 5 chr15 9812965 9813163 -93681811 + RMER15 LTR ERVL 261 472 -103 4 659 1171 347 30 8 chr15 9813174 9813543 -93681431 - MTE2b LTR MaLR 0 379 3 4 659 294 300 0 22 chr15 9813661 9813753 -93681221 + B4 SINE B4 9 98 -194 4 659 208 182 0 22 chr15 9815249 9815294 -93679680 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 659 938 225 55 27 chr15 9815364 9815583 -93679391 + URR1B DNA MER1_type 1 225 0 4 659 219 103 0 0 chr15 9815768 9815807 -93679167 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 659 534 16 0 0 chr15 9815807 9815869 -93679105 + (GA)n Simple_repeat Simple_repeat 2 64 0 4 659 294 315 80 27 chr15 9815890 9816040 -93678934 - MLT1B LTR MaLR -232 158 1 4 659 576 81 0 0 chr15 9816081 9816168 -93678806 + (TC)n Simple_repeat Simple_repeat 2 88 0 4 659 361 330 0 20 chr15 9816187 9816286 -93678688 - B1F2 SINE Alu -46 103 7 4 659 238 395 7 44 chr15 9816286 9816319 -93678655 - ID_B1 SINE B4 -41 180 54 4 659 362 385 0 0 chr15 9816718 9816822 -93678152 + B1F2 SINE Alu 5 108 -41 4 659 402 148 43 9 chr15 9816846 9816962 -93678012 + (TAGA)n Simple_repeat Simple_repeat 2 121 0 4 659 397 308 48 36 chr15 9816978 9817304 -93677670 - L1M2 LINE L1 -903 5240 4855 4 659 2594 111 19 35 chr15 9817304 9817726 -93677248 + Lx LINE L1 6235 6649 -5 4 659 266 236 19 131 chr15 9817726 9817769 -93677205 - L1M2 LINE L1 -993 4854 4813 4 659 886 65 24 0 chr15 9817779 9817903 -93677071 - RLTR10 LTR ERVK -2 388 262 4 659 259 152 34 0 chr15 9817907 9817966 -93677008 - RLTR10 LTR ERVK -71 319 259 4 659 2287 73 9 15 chr15 9817995 9818328 -93676646 - RLTR10 LTR ERVK -59 331 1 4 659 1094 251 129 0 chr15 9818334 9818668 -93676306 + MTEb LTR MaLR 3 379 0 4 659 1403 308 66 32 chr15 9818673 9819206 -93675768 + MTEb-int LTR MaLR 6 556 -1024 4 659 212 282 64 0 chr15 9820637 9820715 -93674259 - MIRc SINE MIR -37 231 149 4 659 1170 61 0 0 chr15 9820836 9820983 -93673991 + B1_Mm SINE Alu 1 147 0 4 659 261 0 0 0 chr15 9820990 9821019 -93673955 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 659 568 257 36 117 chr15 9821421 9821729 -93673245 + B4A SINE B4 4 286 -6 4 659 21 36 0 0 chr15 9821811 9821839 -93673135 + AT_rich Low_complexity Low_complexity 1 28 0 4 659 389 266 126 33 chr15 9822491 9822674 -93672300 + MLT1A1 LTR MaLR 2 201 -207 4 659 385 276 65 0 chr15 9822748 9822871 -93672103 - B1F2 SINE Alu -16 133 3 4 659 356 247 136 0 chr15 9823645 9823726 -93671248 + B3 SINE B2 31 122 -94 4 659 534 196 13 18 chr15 9824596 9824829 -93670145 + (TA)n Simple_repeat Simple_repeat 1 231 0 4 659 252 0 0 0 chr15 9824969 9824997 -93669977 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 659 7359 103 31 1 chr15 9825289 9826474 -93668500 + Lx LINE L1 5430 6654 0 4 659 22 0 0 0 chr15 9826876 9826898 -93668076 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 254 331 17 12 chr15 9827781 9827907 -93667067 + L2a LINE L2 3242 3421 -5 4 659 867 94 133 0 chr15 9829050 9829178 -93665796 + B1_Mm SINE Alu 1 145 -2 4 659 243 146 0 0 chr15 9829179 9829220 -93665754 + (A)n Simple_repeat Simple_repeat 1 41 0 4 659 291 333 9 28 chr15 9829255 9829363 -93665611 - MER20 DNA MER1_type -5 214 109 5 659 570 265 39 31 chr15 9829392 9829552 -93665422 - MTE2a LTR MaLR -15 364 179 5 659 1608 42 5 0 chr15 9829552 9829744 -93665230 + B2_Mm1a SINE B2 1 193 0 5 659 412 362 92 18 chr15 9829744 9829816 -93665158 - MTE2a LTR MaLR -181 178 99 5 82 9703 154 44 6 chr15 9829818 9831631 -93663343 - L1_Mur2 LINE L1 -1458 4428 2548 5 660 4769 173 10 2 chr15 9831628 9832508 -93662466 + L1_Mur2 LINE L1 4496 5382 -495 5 660 2890 48 3 0 chr15 9832529 9832882 -93662092 - IAPEY2_LTR LTR ERVK -3 354 1 5 660 1334 270 126 16 chr15 9832928 9833546 -93661428 - L1MC3 LINE L1 -690 7270 6585 5 660 510 321 148 17 chr15 9833551 9834187 -93660787 - L1MC3 LINE L1 -1543 6417 5698 5 660 220 265 0 12 chr15 9834187 9834271 -93660703 + T-rich Low_complexity Low_complexity 3 85 0 5 660 584 253 38 86 chr15 9834352 9834660 -93660314 - L1MC3 LINE L1 -4440 1962 1602 5 660 504 0 0 0 chr15 9834816 9834872 -93660102 + (GA)n Simple_repeat Simple_repeat 2 57 0 5 660 622 271 5 37 chr15 9834922 9835110 -93659864 - Lx9 LINE L1 -382 7262 7081 5 660 7657 72 2 5 chr15 9835264 9836465 -93658509 + L1_Mus1 LINE L1 5368 6567 0 5 660 356 309 0 0 chr15 9836471 9836565 -93658409 - Lx9 LINE L1 -709 6935 6842 5 660 356 279 77 130 chr15 9836576 9836914 -93658060 - L1MC3 LINE L1 -5219 1289 970 5 660 797 253 0 34 chr15 9837138 9837314 -93657660 + B3 SINE B2 30 199 -17 5 660 26 0 0 0 chr15 9837315 9837341 -93657633 + AT_rich Low_complexity Low_complexity 1 26 0 5 660 194 0 39 0 chr15 9837512 9837538 -93657436 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 660 2711 87 0 3 chr15 9837538 9837917 -93657057 - L1_Mm LINE L1 -1792 4091 3714 5 660 34322 92 13 11 chr15 9837976 9844307 -93650667 - L1Md_F2 LINE L1 -13 6569 238 5 660 27 0 0 0 chr15 9845094 9845121 -93649853 + AT_rich Low_complexity Low_complexity 1 27 0 5 660 741 293 99 12 chr15 9845230 9845562 -93649412 - Lx8 LINE L1 -5 7468 7108 5 660 1484 254 34 29 chr15 9845970 9846387 -93648587 + MTD LTR MaLR 1 419 0 5 660 204 97 0 0 chr15 9847748 9847779 -93647195 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 660 441 303 38 32 chr15 9847830 9847987 -93646987 + MER57E1 LTR ERV1 17 174 -198 5 660 9350 138 17 6 chr15 9848036 9850304 -93644670 - Lx2A LINE L1 -1 7007 4707 5 660 3928 76 13 6 chr15 9850297 9850327 -93644647 - L1_Mus2 LINE L1 -434 6132 6102 5 660 3268 41 5 2 chr15 9850327 9850722 -93644252 + MTA_Mm LTR MaLR 1 396 0 5 660 8212 63 6 7 chr15 9850722 9851821 -93643153 + MTA_Mm-int LTR MaLR 1 1098 0 5 660 3104 51 8 8 chr15 9851821 9852217 -93642757 + MTA_Mm LTR MaLR 1 396 0 5 660 9342 92 8 4 chr15 9852217 9853770 -93641204 - L1_Mus2 LINE L1 -465 6101 4542 5 660 657 25 0 0 chr15 9853826 9853905 -93641069 + (GAAA)n Simple_repeat Simple_repeat 3 81 0 5 660 364 272 231 23 chr15 9853928 9854188 -93640786 + Tigger7 DNA MER2_type 2150 2463 -28 5 660 1948 117 26 16 chr15 9854238 9854551 -93640423 + Lx2 LINE L1 6680 6995 -2 5 660 1040 220 160 17 chr15 9854800 9855100 -93639874 + MTD LTR MaLR 1 343 -76 5 660 1675 229 104 27 chr15 9855150 9855638 -93639336 - RLTR11A LTR ERVK 0 528 3 5 660 751 330 78 31 chr15 9856026 9856130 -93638844 - L1M2 LINE L1 -864 5279 5169 5 660 204 40 0 0 chr15 9856130 9856155 -93638819 + (TTG)n Simple_repeat Simple_repeat 3 27 0 5 660 751 330 78 31 chr15 9856155 9856704 -93638270 - L1M2 LINE L1 -975 5168 4595 5 660 1667 301 110 18 chr15 9856735 9858030 -93636944 - L1M2 LINE L1 -1751 4392 2979 5 660 1002 301 56 29 chr15 9858030 9858440 -93636534 - Lx8 LINE L1 -713 6760 6340 5 660 1211 233 70 12 chr15 9858442 9858761 -93636213 - MTD LTR MaLR -2 419 68 5 660 297 0 0 0 chr15 9858761 9858794 -93636180 + (T)n Simple_repeat Simple_repeat 1 33 0 5 660 5601 51 1 4 chr15 9858958 9859661 -93635313 - L1Md_F2 LINE L1 -2 6580 5880 5 660 476 73 0 0 chr15 9859661 9859729 -93635245 + L1_Mm LINE L1 1486 1553 -4330 5 660 405 210 0 62 chr15 9859744 9859857 -93635117 - MTD LTR MaLR -314 105 1 5 660 423 321 21 7 chr15 9859859 9860000 -93634974 - Lx8 LINE L1 -1131 6342 6200 5 660 21 0 0 0 chr15 9860208 9860229 -93634745 + AT_rich Low_complexity Low_complexity 1 21 0 5 660 210 347 79 13 chr15 9860273 9860349 -93634625 - B3A SINE B2 -42 156 76 5 660 342 330 0 9 chr15 9860353 9860463 -93634511 + Lx8 LINE L1 7078 7186 -287 5 660 207 0 0 0 chr15 9860851 9860874 -93634100 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 660 180 0 0 0 chr15 9861357 9861377 -93633597 + (T)n Simple_repeat Simple_repeat 1 20 0 5 660 613 263 72 11 chr15 9861483 9861664 -93633310 - Lx8 LINE L1 -282 7191 7000 5 660 2271 285 35 14 chr15 9861704 9862366 -93632608 + Lx8 LINE L1 6233 6908 -565 5 660 1251 247 44 109 chr15 9863021 9863525 -93631449 + Lx7 LINE L1 7223 7693 -3 5 660 1487 323 81 18 chr15 9863829 9865155 -93629819 - L1M2 LINE L1 -47 5833 4431 5 660 3405 120 40 2 chr15 9865387 9865926 -93629048 - L1_Mus4 LINE L1 0 6636 6092 5 660 610 246 0 0 chr15 9867007 9867125 -93627849 + B1_Mur1 SINE Alu 27 144 -5 5 660 480 62 0 0 chr15 9868109 9868173 -93626801 + (CA)n Simple_repeat Simple_repeat 2 65 0 5 660 194 233 0 16 chr15 9868373 9868434 -93626540 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 660 315 174 35 0 chr15 9868522 9868608 -93626366 + (CA)n Simple_repeat Simple_repeat 1 89 0 5 660 998 249 53 138 chr15 9869165 9869543 -93625431 + MTE2a LTR MaLR 19 364 -15 5 660 617 123 0 9 chr15 9870024 9870131 -93624843 + (TTTC)n Simple_repeat Simple_repeat 1 106 0 5 660 261 0 0 0 chr15 9870444 9870473 -93624501 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 660 2417 294 56 14 chr15 9870499 9871490 -93623484 - Lx9 LINE L1 -214 7430 6362 5 660 729 34 0 0 chr15 9871800 9871888 -93623086 + (TC)n Simple_repeat Simple_repeat 1 88 0 5 660 649 337 91 28 chr15 9871976 9872229 -93622745 - B4A SINE B4 -23 269 1 5 660 274 303 0 0 chr15 9873501 9873567 -93621407 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 660 461 339 57 22 chr15 9874360 9874589 -93620385 + LTR16C LTR ERVL 253 489 0 5 660 294 333 68 0 chr15 9874736 9874868 -93620106 - MLT1D LTR MaLR -6 499 359 5 660 2565 93 49 24 chr15 9875084 9875493 -93619481 + Lx LINE L1 6236 6654 0 5 660 226 283 0 0 chr15 9875598 9875651 -93619323 + RSINE1 SINE B4 8 60 -105 5 660 1236 94 50 0 chr15 9876222 9876402 -93618572 - B2_Mm2 SINE B2 -5 190 2 5 660 271 325 117 12 chr15 9876421 9876592 -93618382 - L2 LINE L2 -556 2863 2675 5 660 845 319 29 65 chr15 9876828 9877272 -93617702 + Lx9 LINE L1 7058 7489 -155 5 660 533 55 14 0 chr15 9877272 9877345 -93617629 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 5 660 845 319 29 65 chr15 9877345 9877448 -93617526 + Lx9 LINE L1 7490 7588 -56 5 660 3240 46 5 0 chr15 9877448 9877842 -93617132 + MTA_Mm LTR MaLR 1 396 0 5 660 845 319 29 65 chr15 9877842 9877879 -93617095 + Lx9 LINE L1 7589 7622 -22 5 660 688 266 94 64 chr15 9877926 9878336 -93616638 + RLTR11B LTR ERVK 5 433 -8 5 660 338 269 83 51 chr15 9880189 9880346 -93614628 + MER63B DNA AcHobo 270 431 -5 5 660 9665 64 5 7 chr15 9881366 9882646 -93612328 + L1Md_F2 LINE L1 4310 5586 -297 5 660 7588 59 17 7 chr15 9882646 9883629 -93611345 + L1Md_F2 LINE L1 5587 6579 -3 5 660 252 167 0 0 chr15 9883947 9884001 -93610973 + L1_Mus3 LINE L1 6579 6632 -6 5 660 315 0 0 0 chr15 9884148 9884183 -93610791 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 660 346 306 45 12 chr15 9884263 9884397 -93610577 + MLT1F LTR MaLR 27 172 -383 5 660 309 286 102 0 chr15 9884607 9884705 -93610269 + PB1D10 SINE Alu 2 109 -8 5 660 290 167 17 0 chr15 9885075 9885135 -93609839 + CT-rich Low_complexity Low_complexity 2 62 0 5 660 398 214 66 22 chr15 9885206 9885297 -93609677 + RMER10A LTR ERVL 323 417 -25 5 660 535 289 81 0 chr15 9885868 9886065 -93608909 - B3 SINE B2 0 216 4 5 660 376 339 9 85 chr15 9886374 9886596 -93608378 + MLT1E2 LTR MaLR 3 216 -289 5 660 302 326 84 7 chr15 9886689 9886831 -93608143 + MLT1E2 LTR MaLR 346 498 -7 5 660 1531 153 42 0 chr15 9886982 9887243 -93607731 - Lx3B LINE L1 -5 6968 6697 5 660 24 32 0 0 chr15 9887774 9887805 -93607169 + AT_rich Low_complexity Low_complexity 1 31 0 5 660 309 321 7 62 chr15 9887824 9887970 -93607004 + Lx8 LINE L1 6975 7112 -361 5 660 25 31 0 0 chr15 9888093 9888125 -93606849 + AT_rich Low_complexity Low_complexity 1 32 0 5 660 1234 323 76 50 chr15 9888920 9889634 -93605340 + MLT-int LTR MaLR 2 733 -1002 5 660 893 289 109 60 chr15 9889663 9890005 -93604969 + L1_Mur3 LINE L1 4536 4859 -1021 5 660 936 252 135 39 chr15 9890005 9890339 -93604635 - ORR1D2 LTR MaLR -1 369 4 5 660 893 289 109 60 chr15 9890339 9890971 -93604003 + L1_Mur3 LINE L1 4860 5558 -322 5 660 500 349 74 44 chr15 9891162 9891567 -93603407 + Lx8 LINE L1 7032 7448 -25 5 660 307 315 11 32 chr15 9893296 9893391 -93601583 + B1F2 SINE Alu 34 126 -21 5 660 33233 63 4 8 chr15 9893920 9899156 -93595818 + L1Md_F3 LINE L1 417 5586 -297 5 660 8077 43 2 4 chr15 9899156 9900153 -93594821 + L1Md_F3 LINE L1 5587 6581 -3 5 660 1416 254 135 46 chr15 9900218 9900692 -93594282 + RMER19C LTR ERVK 96 611 0 5 660 502 229 45 18 chr15 9901104 9901215 -93593759 + B1_Mur1 SINE Alu 33 146 -3 5 660 22 0 0 0 chr15 9901369 9901391 -93593583 + AT_rich Low_complexity Low_complexity 1 22 0 5 660 281 0 77 0 chr15 9901858 9901897 -93593077 + (TAATG)n Simple_repeat Simple_repeat 2 43 0 5 660 316 297 19 65 chr15 9902104 9902212 -93592762 - PB1D9 SINE Alu -15 105 3 5 660 1019 318 92 33 chr15 9902252 9902427 -93592547 + RMER5 LTR ERV1 17 196 -338 5 660 207 0 0 0 chr15 9902427 9902450 -93592524 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 5 660 1019 318 92 33 chr15 9902450 9902753 -93592221 + RMER5 LTR ERV1 197 522 -12 5 660 1911 112 205 6 chr15 9902957 9903308 -93591666 + BGLII_Mus LTR ERVK 2 422 0 5 660 21 0 0 0 chr15 9904054 9904075 -93590899 + AT_rich Low_complexity Low_complexity 1 21 0 5 660 244 352 16 0 chr15 9904075 9904203 -93590771 - L1M3 LINE L1 -383 5806 5677 5 660 3033 94 2 2 chr15 9904377 9904784 -93590190 - MTB_Mm LTR MaLR 0 407 1 5 660 1288 238 60 13 chr15 9904803 9905105 -93589869 - 7SK RNA RNA -1 330 15 5 660 22 35 0 0 chr15 9905592 9905621 -93589353 + AT_rich Low_complexity Low_complexity 1 29 0 5 660 241 138 30 15 chr15 9906794 9906860 -93588114 + (TCTCTG)n Simple_repeat Simple_repeat 2 68 0 5 660 24 53 0 0 chr15 9906969 9907007 -93587967 + AT_rich Low_complexity Low_complexity 1 38 0 6 660 738 171 64 0 chr15 9907079 9907219 -93587755 - B1_Mur3 SINE Alu 0 149 1 6 660 21 71 0 0 chr15 9907276 9907318 -93587656 + AT_rich Low_complexity Low_complexity 1 42 0 6 660 1197 97 0 0 chr15 9907483 9907713 -93587261 + (TG)n Simple_repeat Simple_repeat 1 230 0 6 660 333 0 0 0 chr15 9908221 9908258 -93586716 + (TAA)n Simple_repeat Simple_repeat 3 39 0 6 660 371 262 40 94 chr15 9908269 9908492 -93586482 - Lx8 LINE L1 -278 7195 6985 6 660 1760 280 29 57 chr15 9908514 9909161 -93585813 - Lx8 LINE L1 -626 6847 6219 6 660 252 186 17 0 chr15 9909341 9909400 -93585574 + Lx8 LINE L1 5160 5219 -628 6 660 635 279 62 68 chr15 9909695 9910113 -93584861 + Lx8 LINE L1 5483 5925 -1548 6 660 435 360 6 6 chr15 9910764 9910937 -93584037 + (CA)n Simple_repeat Simple_repeat 2 174 0 6 660 195 42 0 0 chr15 9911467 9911491 -93583483 + (TA)n Simple_repeat Simple_repeat 1 24 0 6 660 374 39 0 94 chr15 9911659 9911744 -93583230 + (TTTTTG)n Simple_repeat Simple_repeat 2 78 0 6 660 27 49 0 0 chr15 9912547 9912588 -93582386 + AT_rich Low_complexity Low_complexity 1 41 0 6 660 419 256 57 8 chr15 9912642 9912764 -93582210 - Lx8 LINE L1 -530 6943 6816 6 660 683 311 75 35 chr15 9912776 9913269 -93581705 + Lx8 LINE L1 6922 7434 -39 6 660 927 196 89 4 chr15 9913346 9913627 -93581347 + Lx9 LINE L1 7340 7644 0 6 660 238 297 70 2 chr15 9914102 9914196 -93580778 + PB1D10 SINE Alu 9 107 -13 6 660 1059 103 18 0 chr15 9914460 9914625 -93580349 - L1Md_F2 LINE L1 -1 6581 6414 6 660 449 200 0 0 chr15 9915230 9915310 -93579664 + ORR1D2 LTR MaLR 6 85 -285 6 660 2525 201 32 14 chr15 9915310 9915876 -93579098 + Lx5 LINE L1 5883 6458 -592 6 660 548 180 0 14 chr15 9915878 9916019 -93578955 + L1_Mus3 LINE L1 1957 2095 -3788 6 660 12714 139 14 1 chr15 9916017 9917362 -93577612 + L1_Mus3 LINE L1 3631 4989 -894 6 660 5945 38 21 0 chr15 9917362 9918081 -93576893 + L1Md_F2 LINE L1 5847 6580 -2 6 660 12714 98 21 3 chr15 9918081 9919702 -93575272 + L1_Mus3 LINE L1 4990 6637 -1 6 660 312 296 172 21 chr15 9920156 9920301 -93574673 + MER2 DNA MER2_type 3 169 -176 6 660 307 259 11 11 chr15 9920721 9920811 -93574163 + MER2 DNA MER2_type 175 264 -81 6 660 315 342 61 31 chr15 9921050 9921246 -93573728 - L1MEg LINE L1 -4952 1132 931 6 660 1037 218 13 25 chr15 9921246 9921481 -93573493 + RMER12 LTR ERVK 1 232 -1090 6 660 36347 11 1 7 chr15 9921481 9927080 -93567894 + L1Md_A LINE L1 27 5586 -297 6 660 8887 12 0 0 chr15 9927080 9928076 -93566898 + L1Md_A LINE L1 5587 6582 0 6 660 4065 211 50 18 chr15 9928078 9928619 -93566355 + RMER12 LTR ERVK 218 767 -555 6 660 180 0 0 0 chr15 9928619 9928639 -93566335 + (TCCA)n Simple_repeat Simple_repeat 3 22 0 6 660 4065 221 67 30 chr15 9928639 9929138 -93565836 + RMER12 LTR ERVK 768 1205 -117 6 660 640 300 14 23 chr15 9930952 9931167 -93563807 + B3 SINE B2 1 213 -3 6 660 255 61 0 0 chr15 9931311 9931344 -93563630 + (TGG)n Simple_repeat Simple_repeat 1 33 0 6 660 318 50 0 0 chr15 9931345 9931385 -93563589 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 660 206 271 10 20 chr15 9931459 9931557 -93563417 + T-rich Low_complexity Low_complexity 1 97 0 6 660 237 248 112 95 chr15 9931571 9931740 -93563234 + L2 LINE L2 1371 1542 -1877 6 660 1216 274 56 19 chr15 9931788 9932162 -93562812 - MTD LTR MaLR -14 393 1 6 660 648 359 78 1 chr15 9932351 9932599 -93562375 + B4 SINE B4 2 269 -23 6 660 345 24 0 0 chr15 9932599 9932641 -93562333 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 660 502 379 81 7 chr15 9932641 9932663 -93562311 + B4A SINE B4 270 291 -1 6 660 643 196 52 8 chr15 9932766 9932900 -93562074 + MTD LTR MaLR 86 225 -194 6 660 1996 61 0 0 chr15 9933048 9933295 -93561679 - MTB_Mm LTR MaLR 0 407 161 6 660 1070 73 7 0 chr15 9933341 9933477 -93561497 + B1_Mm SINE Alu 1 137 -10 6 660 438 20 0 0 chr15 9933477 9933528 -93561446 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 6 660 950 299 22 41 chr15 9933748 9934258 -93560716 + L1M2 LINE L1 3472 3971 -2172 6 660 485 107 24 12 chr15 9934263 9934348 -93560626 + L1_Mur2 LINE L1 4531 4616 -1261 6 660 2244 180 0 7 chr15 9934340 9934788 -93560186 + L1_Mur2 LINE L1 4864 5308 -569 6 660 9298 54 6 0 chr15 9934793 9936714 -93558260 - L1Md_F2 LINE L1 -1 6581 4653 6 660 1423 168 20 97 chr15 9936701 9937050 -93557924 + L1_Mur2 LINE L1 5300 5621 -256 6 660 1346 254 74 14 chr15 9937048 9937487 -93557487 + Lx2B LINE L1 6505 7046 -4 6 660 22 0 0 0 chr15 9937487 9937509 -93557465 + AT_rich Low_complexity Low_complexity 1 22 0 6 660 239 242 59 29 chr15 9937697 9937799 -93557175 - Lx9 LINE L1 -7 7637 7533 6 660 1932 156 12 12 chr15 9937812 9938137 -93556837 + ORR1A4 LTR MaLR 1 325 -4 6 660 4208 159 37 43 chr15 9938141 9938997 -93555977 + ORR1A4-int LTR MaLR 1 806 -1157 6 660 908 50 16 0 chr15 9938997 9939118 -93555856 + (TATATG)n Simple_repeat Simple_repeat 4 126 0 6 660 3928 181 29 219 chr15 9939118 9939661 -93555313 + ORR1A4-int LTR MaLR 618 1134 -658 6 660 405 0 0 0 chr15 9939664 9939709 -93555265 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 660 2537 233 138 13 chr15 9939711 9940469 -93554505 - Lx9 LINE L1 -304 7340 6488 6 660 229 286 0 0 chr15 9942529 9942578 -93552396 + (CATA)n Simple_repeat Simple_repeat 3 51 0 6 660 358 258 115 16 chr15 9944361 9944483 -93550491 - MLT1B LTR MaLR -2 388 255 6 660 492 230 132 44 chr15 9944480 9944538 -93550436 - CYRA11_Mm Unknown Y-chromosome -227 390 172 6 660 833 150 0 21 chr15 9944538 9944681 -93550293 + URR1B DNA MER1_type 86 225 0 6 660 3009 108 16 11 chr15 9945003 9945454 -93549520 + Lx3A LINE L1 6523 6975 -6 6 660 240 143 0 0 chr15 9945510 9945552 -93549422 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 6 660 293 330 69 10 chr15 9945558 9945659 -93549315 - MIRb SINE MIR -157 111 5 6 660 225 94 0 0 chr15 9945867 9945899 -93549075 + (ATTG)n Simple_repeat Simple_repeat 4 35 0 6 660 931 174 179 0 chr15 9946371 9946561 -93548413 - URR1B DNA MER1_type -1 224 1 6 660 27 0 0 0 chr15 9946670 9946697 -93548277 + AT_rich Low_complexity Low_complexity 1 27 0 6 660 3918 122 88 16 chr15 9947737 9948434 -93546540 + RMER17A LTR ERVK 1 747 -4 6 660 379 305 0 0 chr15 9950094 9950176 -93544798 + PB1D10 SINE Alu 26 107 -10 6 660 428 302 194 71 chr15 9951053 9951377 -93543597 + MTE2b LTR MaLR 1 364 -15 6 660 379 305 0 0 chr15 9953070 9953152 -93541822 + PB1D10 SINE Alu 26 107 -10 6 660 428 302 194 71 chr15 9954029 9954353 -93540621 + MTE2b LTR MaLR 1 364 -15 6 660 307 289 0 43 chr15 9956050 9956144 -93538830 + PB1D10 SINE Alu 26 115 -2 6 660 25 31 0 0 chr15 9956241 9956273 -93538701 + AT_rich Low_complexity Low_complexity 1 32 0 6 660 1981 46 4 11 chr15 9956667 9956930 -93538044 + L1Md_A LINE L1 6322 6582 0 6 660 544 296 135 68 chr15 9957288 9957643 -93537331 + MTE2b LTR MaLR 1 379 0 6 660 405 0 0 0 chr15 9958915 9958960 -93536014 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 660 213 39 0 0 chr15 9959067 9959093 -93535881 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 660 405 39 0 0 chr15 9959186 9959237 -93535737 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 660 24 0 0 0 chr15 9959941 9959965 -93535009 + GC_rich Low_complexity Low_complexity 1 24 0 6 82 18656 76 14 47 chr15 9960725 9963556 -93531418 + Lx3_Mus LINE L1 3194 5909 -1100 6 661 213 65 0 0 chr15 9963556 9963587 -93531387 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 661 9790 82 43 12 chr15 9963587 9964644 -93530330 + Lx3_Mus LINE L1 5910 7008 -1 6 661 232 250 15 59 chr15 9964882 9964950 -93530024 - ID4_ SINE ID -14 69 5 6 661 188 318 53 64 chr15 9965505 9965599 -93529375 - MIRb SINE MIR -150 118 26 6 661 1827 148 80 31 chr15 9966273 9966663 -93528311 - RLTR9E LTR ERVK 0 409 1 6 661 284 296 46 9 chr15 9967107 9967216 -93527758 + BC1_Mm scRNA scRNA 14 126 -26 6 661 1656 185 108 0 chr15 9967328 9967471 -93527503 + ORR1B2 LTR MaLR 1 152 -215 6 661 630 39 0 0 chr15 9967471 9967548 -93527426 + (TC)n Simple_repeat Simple_repeat 2 78 0 6 661 1656 185 108 0 chr15 9967548 9967728 -93527246 + ORR1B2 LTR MaLR 153 358 -9 6 661 25 31 0 0 chr15 9968141 9968173 -93526801 + AT_rich Low_complexity Low_complexity 1 32 0 6 661 346 269 74 0 chr15 9968199 9968307 -93526667 - L1_Rod LINE L1 -957 4890 4775 6 661 262 226 0 0 chr15 9969393 9969455 -93525519 + Lx9 LINE L1 7583 7644 0 6 661 225 82 61 0 chr15 9970078 9970127 -93524847 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 661 294 309 24 0 chr15 9971118 9971202 -93523772 + CT-rich Low_complexity Low_complexity 3 88 0 6 661 4222 142 80 8 chr15 9971300 9972353 -93522621 + L1_Mur2 LINE L1 529 1661 -4216 6 661 3614 78 45 4 chr15 9972353 9972845 -93522129 - RLTR1B LTR ERV1 0 512 1 6 661 2691 120 102 6 chr15 9972845 9972944 -93522030 + L1_Mur2 LINE L1 1662 1772 -4105 6 661 34389 74 10 2 chr15 9972949 9979090 -93515884 - L1Md_F2 LINE L1 -3 6579 390 6 661 218 371 33 22 chr15 9979091 9979182 -93515792 - PB1D10 SINE Alu -48 101 10 6 661 1286 202 160 61 chr15 9979188 9979531 -93515443 + ORR1C1 LTR MaLR 1 377 -1 6 661 213 39 0 0 chr15 9979628 9979654 -93515320 + (CTTTG)n Simple_repeat Simple_repeat 2 27 0 6 661 4039 123 25 6 chr15 9979654 9980294 -93514680 - Lx2A1 LINE L1 -9 6999 6348 6 661 1118 306 47 24 chr15 9981129 9981581 -93513393 - Lx8 LINE L1 -256 7217 6756 6 661 651 299 120 9 chr15 9981584 9981800 -93513174 + 7SK RNA RNA 5 244 -87 6 661 408 88 0 0 chr15 9982581 9982638 -93512336 + (A)n Simple_repeat Simple_repeat 1 57 0 6 661 671 89 7 43 chr15 9982645 9982786 -93512188 + (GGAGA)n Simple_repeat Simple_repeat 5 140 0 6 661 216 0 0 0 chr15 9982945 9982969 -93512005 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 661 1303 199 91 36 chr15 9983088 9983452 -93511522 + ORR1C2 LTR MaLR 1 384 0 6 661 564 341 87 66 chr15 9984103 9984495 -93510479 + MLT1C LTR MaLR 51 450 -17 6 661 442 347 60 77 chr15 9984500 9984931 -93510043 - MLT1G1 LTR MaLR -136 433 10 6 661 367 262 25 0 chr15 9985388 9985468 -93509506 - MTE2b LTR MaLR -297 82 1 6 661 2508 308 54 42 chr15 9985573 9986496 -93508478 - Lx8 LINE L1 -60 7413 6480 6 661 218 81 27 0 chr15 9986768 9986805 -93508169 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 661 191 307 99 30 chr15 9987043 9987174 -93507800 + MIRc SINE MIR 93 232 -36 6 661 252 362 30 45 chr15 9987768 9987901 -93507073 + MIRb SINE MIR 34 164 -104 6 661 2010 141 3 38 chr15 9989064 9989403 -93505571 - ORR1A2 LTR MaLR 0 327 1 7 661 8834 179 21 23 chr15 9989403 9991199 -93503775 - ORR1A2-int LTR MaLR 0 1792 1 7 661 1937 161 12 3 chr15 9991199 9991522 -93503452 - ORR1A2 LTR MaLR 0 326 1 7 661 448 308 62 86 chr15 9991797 9992121 -93502853 - ORR1E LTR MaLR -43 316 1 7 661 229 220 34 0 chr15 9992405 9992464 -93502510 - LTR37A LTR ERV1 -277 149 89 7 661 34433 86 11 2 chr15 9992703 9998586 -93496388 + L1Md_F2 LINE L1 208 6134 -448 7 661 1776 161 9 60 chr15 9998920 9999256 -93495718 - ORR1A3 LTR MaLR -7 319 1 7 661 363 269 93 31 chr15 10000132 10000293 -93494681 - MLT1C LTR MaLR -14 453 283 1 661 426 85 0 0 chr15 10000823 10000882 -93494092 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 661 291 71 0 0 chr15 10000884 10000926 -93494048 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 661 225 0 0 0 chr15 10001012 10001037 -93493937 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4 661 198 289 18 126 chr15 10002664 10002775 -93492199 - L2b LINE L2 -35 3340 3242 5 661 36 23 0 0 chr15 10004351 10004394 -93490580 + AT_rich Low_complexity Low_complexity 1 43 0 6 661 240 111 0 0 chr15 10006224 10006260 -93488714 + (A)n Simple_repeat Simple_repeat 1 36 0 7 661 1137 155 5 0 chr15 10007095 10007282 -93487692 - URR1B DNA MER1_type 0 225 38 8 661 748 243 39 82 chr15 10007856 10008062 -93486912 - B3A SINE B2 0 198 2 9 661 543 397 83 16 chr15 10008246 10008669 -93486305 + MLT1F1 LTR MaLR 119 569 0 1 661 1588 27 21 0 chr15 10009079 10009267 -93485707 + B2_Mm1t SINE B2 2 193 0 1 661 323 235 60 9 chr15 10009932 10010048 -93484926 + L1MA8 LINE L1 6168 6289 -2 1 661 390 42 0 0 chr15 10010533 10010581 -93484393 + (CTTA)n Simple_repeat Simple_repeat 3 50 0 1 661 675 291 0 26 chr15 10010598 10010750 -93484224 - RSINE1 SINE B4 -17 148 1 1 661 372 312 44 52 chr15 10011056 10011191 -93483783 - B1F SINE Alu -5 144 11 1 661 892 259 203 16 chr15 10011443 10011749 -93483225 - ORR1D2 LTR MaLR -5 365 3 1 661 324 120 0 0 chr15 10012447 10012497 -93482477 + (A)n Simple_repeat Simple_repeat 1 50 0 1 661 1583 171 99 29 chr15 10012762 10013105 -93481869 - ORR1B2 LTR MaLR 0 367 1 1 661 396 0 0 0 chr15 10013796 10013840 -93481134 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 661 689 214 7 14 chr15 10014539 10014681 -93480293 + B1_Mur1 SINE Alu 1 141 -8 2 661 405 0 0 0 chr15 10014759 10014804 -93480170 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 2 661 437 347 65 18 chr15 10014810 10014980 -93479994 - ID_B1 SINE B4 -45 179 2 2 661 47 0 0 0 chr15 10015046 10015093 -93479881 + AT_rich Low_complexity Low_complexity 1 47 0 2 661 348 229 0 0 chr15 10016039 10016122 -93478852 + GA-rich Low_complexity Low_complexity 2 84 0 2 661 1364 262 67 6 chr15 10016541 10016887 -93478087 + MTEb LTR MaLR 1 367 -12 2 661 1496 103 36 0 chr15 10016890 10017113 -93477861 - L1_Mus2 LINE L1 -11 6555 6325 2 661 522 46 0 0 chr15 10017115 10017180 -93477794 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 661 440 212 6 190 chr15 10017590 10017753 -93477221 - RMER19C LTR ERVK 0 611 479 2 661 952 176 103 69 chr15 10017751 10017983 -93476991 - RMER19B LTR ERVK -355 547 308 2 661 408 20 0 0 chr15 10018085 10018134 -93476840 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 661 258 81 0 0 chr15 10020819 10020856 -93474118 + (TGG)n Simple_repeat Simple_repeat 1 37 0 3 661 273 57 0 0 chr15 10021234 10021269 -93473705 + (CAAAAA)n Simple_repeat Simple_repeat 1 35 0 3 661 249 33 0 0 chr15 10021283 10021313 -93473661 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 3 661 1539 223 27 6 chr15 10021503 10021832 -93473142 + RLTR17 LTR ERVK 1 336 -356 3 661 25529 126 18 9 chr15 10021833 10025359 -93469615 - L1_Mus3 LINE L1 0 6638 3080 3 661 3366 25 22 0 chr15 10025359 10025761 -93469213 + IAPLTR2a LTR ERVK 1 411 0 3 661 25529 144 20 11 chr15 10025761 10028119 -93466855 - L1_Mus3 LINE L1 -2804 3079 489 3 661 1926 153 16 19 chr15 10028144 10028464 -93466510 + RLTR17 LTR ERVK 315 633 -59 3 661 569 286 76 69 chr15 10029105 10029394 -93465580 + RLTR11B LTR ERVK 7 297 -156 3 661 434 252 60 49 chr15 10029439 10029600 -93465374 + RLTR11B LTR ERVK 259 462 -66 3 661 22 0 0 0 chr15 10029910 10029932 -93465042 + AT_rich Low_complexity Low_complexity 1 22 0 3 661 451 311 79 23 chr15 10030255 10030597 -93464377 - Charlie21a DNA MER1_type -550 663 303 4 661 309 309 139 56 chr15 10030743 10031031 -93463943 + L1MEd LINE L1 945 1256 -4863 4 661 228 180 154 22 chr15 10031486 10031577 -93463397 + Lx9 LINE L1 7513 7615 -29 4 661 22 56 0 0 chr15 10031586 10031622 -93463352 + AT_rich Low_complexity Low_complexity 1 36 0 4 661 301 317 19 28 chr15 10031929 10032036 -93462938 + B4A SINE B4 1 106 -186 4 661 567 43 0 0 chr15 10032254 10032324 -93462650 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 4 661 1359 251 90 15 chr15 10032374 10032928 -93462046 + Lx8 LINE L1 5332 5973 -1671 4 661 1460 212 58 55 chr15 10033176 10033342 -93461632 + ORR1D1 LTR MaLR 9 175 -199 4 661 486 0 0 0 chr15 10033342 10033396 -93461578 + (TC)n Simple_repeat Simple_repeat 2 55 0 4 661 306 0 0 0 chr15 10033396 10033429 -93461545 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 661 1460 212 58 55 chr15 10033429 10033626 -93461348 + ORR1D1 LTR MaLR 176 373 -1 4 661 1006 322 99 10 chr15 10033644 10034222 -93460752 + Lx8 LINE L1 6268 6896 -577 4 661 693 312 77 24 chr15 10034220 10034727 -93460247 + Lx8 LINE L1 6933 7462 -11 4 661 284 91 38 38 chr15 10034960 10035040 -93459934 + A-rich Low_complexity Low_complexity 3 82 0 5 661 294 277 75 0 chr15 10035050 10035144 -93459830 - Lx8 LINE L1 -417 7056 6956 5 661 2095 219 138 60 chr15 10035144 10035971 -93459003 + RLTR13B1 LTR ERVK 3 893 0 5 661 29 84 0 0 chr15 10036244 10036315 -93458659 + AT_rich Low_complexity Low_complexity 1 71 0 5 661 342 0 0 0 chr15 10037673 10037711 -93457263 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 661 305 244 0 55 chr15 10037732 10037823 -93457151 - L1MA4 LINE L1 -370 5930 5845 5 661 4158 98 39 23 chr15 10038190 10039010 -93455964 + L1_Mus3 LINE L1 5735 6633 -5 5 661 27 0 0 0 chr15 10039038 10039065 -93455909 + AT_rich Low_complexity Low_complexity 1 27 0 5 661 2656 43 0 6 chr15 10040084 10040411 -93454563 - IAPEY2_LTR LTR ERVK 0 357 33 5 661 369 281 150 31 chr15 10040732 10040986 -93453988 + L1M3 LINE L1 3068 3351 -2792 5 661 328 266 0 0 chr15 10040993 10041057 -93453917 + tRNA-Ala-GCA tRNA tRNA 3 66 -9 6 661 441 129 0 0 chr15 10041076 10041146 -93453828 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 661 413 305 24 20 chr15 10041164 10041412 -93453562 + L1M3 LINE L1 3341 3589 -2551 5 661 824 315 35 12 chr15 10041446 10041790 -93453184 + Lx8 LINE L1 6456 6807 -666 6 661 441 320 112 25 chr15 10041799 10042113 -93452861 + L1MB1 LINE L1 5740 6080 -88 6 661 254 218 0 3 chr15 10042530 10042590 -93452384 + PB1 SINE Alu 1 60 -67 6 661 26 0 0 0 chr15 10043358 10043384 -93451590 + AT_rich Low_complexity Low_complexity 1 26 0 6 661 520 296 37 0 chr15 10043469 10043604 -93451370 + B3A SINE B2 3 142 -56 6 661 432 0 0 0 chr15 10043607 10043655 -93451319 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 661 3277 178 133 70 chr15 10043668 10044267 -93450707 - Lx4B LINE L1 -81 6977 6290 6 661 1181 55 0 0 chr15 10044267 10044413 -93450561 + B1_Mm SINE Alu 2 147 0 6 661 3277 178 133 70 chr15 10044413 10044690 -93450284 - Lx4B LINE L1 -769 6289 6045 6 661 821 246 20 35 chr15 10044891 10045093 -93449881 - B3 SINE B2 -17 199 1 7 661 322 278 154 48 chr15 10045474 10045682 -93449292 - L1MEc LINE L1 -5719 681 452 7 661 903 341 86 46 chr15 10045688 10046167 -93448807 - MT2A LTR ERVL 0 533 36 7 661 284 395 9 9 chr15 10046326 10046441 -93448533 - MIR SINE MIR -71 137 23 7 661 217 306 0 0 chr15 10046731 10046803 -93448171 + MIR SINE MIR 116 187 -75 7 661 459 92 0 0 chr15 10047289 10047354 -93447620 + (A)n Simple_repeat Simple_repeat 1 65 0 7 661 8753 161 44 21 chr15 10047913 10048985 -93445989 + L1_Mur3 LINE L1 892 2053 -3824 7 661 1431 52 0 0 chr15 10048985 10049198 -93445776 + (CA)n Simple_repeat Simple_repeat 1 213 0 7 661 8753 146 41 22 chr15 10049198 10050124 -93444850 + L1_Mur3 LINE L1 2054 2997 -2880 7 661 2293 309 93 30 chr15 10051364 10052573 -93442401 + Lx8 LINE L1 6067 7351 -122 7 661 495 126 0 0 chr15 10052727 10052822 -93442152 + (GA)n Simple_repeat Simple_repeat 2 96 0 7 661 180 125 0 0 chr15 10053360 10053392 -93441582 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 661 1932 147 25 28 chr15 10053446 10053768 -93441206 - ORR1B2 LTR MaLR -46 321 1 8 661 6506 182 61 15 chr15 10053768 10055211 -93439763 - ORR1B2-int LTR MaLR 0 1509 1 8 661 2096 158 22 0 chr15 10055215 10055570 -93439404 - ORR1B2 LTR MaLR -4 363 1 8 661 1066 200 21 31 chr15 10057591 10057879 -93437095 - L1_Mur3 LINE L1 -360 5520 5262 8 661 255 254 0 0 chr15 10057904 10057963 -93437011 + (TA)n Simple_repeat Simple_repeat 1 59 0 8 661 8458 110 31 12 chr15 10057965 10059321 -93435653 - Lx2 LINE L1 -11 6986 5606 8 661 5795 229 53 34 chr15 10059322 10061157 -93433817 - L1_Mur3 LINE L1 -654 5226 3357 8 661 504 0 0 0 chr15 10061216 10061272 -93433702 + (TTA)n Simple_repeat Simple_repeat 2 57 0 8 661 647 178 0 0 chr15 10061273 10061380 -93433594 - B2_Mm2 SINE B2 -88 107 1 8 661 661 342 67 19 chr15 10062602 10063032 -93431942 + MLT1F1 LTR MaLR 1 476 -93 8 661 568 269 4 24 chr15 10063413 10063579 -93431395 + MER45A DNA Tip100 10 174 -4 8 661 226 222 96 14 chr15 10064523 10064596 -93430378 - Charlie2b DNA MER1_type -758 2024 1946 8 661 633 274 15 78 chr15 10065818 10066024 -93428950 + B3A SINE B2 6 198 0 9 661 243 0 0 0 chr15 10066131 10066158 -93428816 + (CAGG)n Simple_repeat Simple_repeat 1 27 0 9 661 414 324 43 7 chr15 10066842 10066982 -93427992 - B1F SINE Alu -1 148 4 9 661 24 0 0 0 chr15 10068463 10068487 -93426487 + AT_rich Low_complexity Low_complexity 1 24 0 9 661 235 372 74 8 chr15 10068781 10068903 -93426071 - MIRc SINE MIR -108 160 31 9 661 308 318 46 9 chr15 10069277 10069385 -93425589 - MIR SINE MIR -132 130 19 9 661 1219 267 46 33 chr15 10069676 10070044 -93424930 + MTEa LTR MaLR 1 373 -6 9 661 477 242 189 43 chr15 10071297 10071501 -93423473 + MTD LTR MaLR 174 404 -17 9 661 411 299 90 0 chr15 10072386 10072520 -93422454 + MLT1A0 LTR MaLR 216 361 -4 9 661 1402 89 10 5 chr15 10072535 10072737 -93422237 + L1_Mus3 LINE L1 6428 6630 -8 9 661 285 345 35 0 chr15 10073071 10073158 -93421816 + PB1D10 SINE Alu 1 90 -27 1 661 454 310 34 8 chr15 10073080 10073197 -93421777 + ID_B1 SINE B4 91 210 -14 1 661 1206 40 0 0 chr15 10074880 10075028 -93419946 + (GAAAA)n Simple_repeat Simple_repeat 1 148 0 1 661 31 68 0 0 chr15 10075527 10075586 -93419388 + AT_rich Low_complexity Low_complexity 1 59 0 1 661 31 68 0 0 chr15 10076082 10076141 -93418833 + AT_rich Low_complexity Low_complexity 1 59 0 1 661 502 275 72 72 chr15 10076192 10076228 -93418746 - MT2B LTR ERVL -283 318 232 1 661 862 50 0 10 chr15 10076228 10076353 -93418621 - B1_Mm SINE Alu -24 123 1 1 661 502 275 72 72 chr15 10076353 10076400 -93418574 - MT2B LTR ERVL -283 231 111 1 661 219 36 0 0 chr15 10077594 10077622 -93417352 + (GAAA)n Simple_repeat Simple_repeat 1 28 0 1 661 349 270 31 44 chr15 10077979 10078228 -93416746 + L1ME1 LINE L1 5703 5943 -236 1 661 6274 176 49 29 chr15 10078616 10079196 -93415778 - Lx4B LINE L1 -11 6965 6343 1 661 1963 59 4 12 chr15 10079196 10079452 -93415522 + L1Md_F2 LINE L1 6327 6580 -2 1 661 13513 168 56 39 chr15 10079452 10080512 -93414462 - Lx4B LINE L1 -710 6348 5295 1 661 3154 165 39 5 chr15 10080512 10081073 -93413901 - Lx LINE L1 -5 6649 6070 1 661 13513 199 91 64 chr15 10081073 10082859 -93412115 - Lx4B LINE L1 -583 5294 3510 1 661 288 77 0 0 chr15 10082859 10082898 -93412076 + (CACG)n Simple_repeat Simple_repeat 1 39 0 1 661 13513 199 91 64 chr15 10082898 10084239 -93410735 - Lx4B LINE L1 -2368 3509 2055 1 661 477 50 0 0 chr15 10084239 10084299 -93410675 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 661 13513 201 107 35 chr15 10084299 10085293 -93409681 - Lx4B LINE L1 -3823 2054 895 1 661 3441 28 2 0 chr15 10086029 10086424 -93408550 - MTA_Mm LTR MaLR 0 396 1 1 661 309 333 9 0 chr15 10086642 10086750 -93408224 + PB1D10 SINE Alu 4 112 -5 1 661 305 336 8 8 chr15 10086756 10086873 -93408101 + L1MB1 LINE L1 5312 5428 -746 1 661 425 261 44 16 chr15 10086917 10087100 -93407874 + L1MB1 LINE L1 5979 6166 -2 1 661 1068 31 0 0 chr15 10087442 10087570 -93407404 + (TA)n Simple_repeat Simple_repeat 2 129 0 1 661 282 314 119 0 chr15 10087570 10087688 -93407286 - MER5A1 DNA MER1_type -33 133 2 1 661 206 32 0 31 chr15 10088394 10088426 -93406548 + (TTG)n Simple_repeat Simple_repeat 2 32 0 1 661 750 264 142 71 chr15 10088484 10088703 -93406271 - Lx8 LINE L1 -3 7470 7237 1 661 782 245 21 21 chr15 10088703 10088895 -93406079 + B3A SINE B2 4 195 -3 1 661 750 264 142 71 chr15 10088895 10089212 -93405762 - Lx8 LINE L1 -237 7236 6896 1 661 1336 68 17 6 chr15 10089230 10089408 -93405566 - B2_Mm2 SINE B2 -15 180 1 1 661 1057 176 0 6 chr15 10089907 10090090 -93404884 + ORR1D1 LTR MaLR 1 182 -192 1 661 198 0 0 0 chr15 10090090 10090112 -93404862 + (TTCC)n Simple_repeat Simple_repeat 4 25 0 1 661 479 138 0 11 chr15 10090110 10090198 -93404776 + (TC)n Simple_repeat Simple_repeat 1 87 0 1 661 241 330 42 42 chr15 10090263 10090358 -93404616 - MER5A1 DNA MER1_type -61 105 11 1 661 870 250 11 130 chr15 10091149 10091503 -93403471 - ORR1C2 LTR MaLR -72 312 1 1 661 21 0 0 0 chr15 10091711 10091732 -93403242 + AT_rich Low_complexity Low_complexity 1 21 0 1 661 1192 98 0 0 chr15 10091737 10091901 -93403073 + B2_Mm2 SINE B2 2 165 -30 1 661 243 0 0 0 chr15 10091901 10091928 -93403046 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 1 661 41 36 0 0 chr15 10091991 10092046 -93402928 + AT_rich Low_complexity Low_complexity 1 55 0 1 82 440 292 111 23 chr15 10092528 10092745 -93402229 + Lx8 LINE L1 7236 7471 -2 1 662 841 260 10 0 chr15 10093002 10093206 -93401768 + B3 SINE B2 2 207 -9 1 662 303 219 31 0 chr15 10093302 10093366 -93401608 + ID4_ SINE ID 2 67 -16 1 662 1926 180 80 31 chr15 10093380 10093857 -93401117 - Lx9 LINE L1 -1 7643 7144 1 662 710 217 6 0 chr15 10093879 10094040 -93400934 + Lx9 LINE L1 6983 7144 -500 1 662 3087 84 50 4 chr15 10094073 10094529 -93400445 + RLTR44C LTR ERVK 1 477 -25 1 662 1202 142 75 13 chr15 10094540 10094768 -93400206 + RLTR44-int LTR ERVK 1 242 -2570 1 662 826 86 0 0 chr15 10094788 10094904 -93400070 + RLTR44-int LTR ERVK 816 931 -1881 1 662 545 141 20 20 chr15 10094904 10095005 -93399969 + RLTR44-int LTR ERVK 845 945 -1867 1 662 2957 110 2 5 chr15 10095026 10095466 -93399508 + RLTR44-int LTR ERVK 877 1315 -1497 1 662 5057 56 2 0 chr15 10095472 10096115 -93398859 + RLTR44-int LTR ERVK 2169 2812 0 1 662 3149 96 33 2 chr15 10096115 10096573 -93398401 + RLTR44C LTR ERVK 1 472 -30 1 662 3834 199 65 11 chr15 10096641 10097601 -93397373 + Lx4B LINE L1 6022 7047 -3 1 662 29975 103 32 9 chr15 10097689 10099335 -93395639 + L1Md_F2 LINE L1 409 2087 -3796 1 662 3539 23 0 0 chr15 10099335 10099731 -93395243 + MTA_Mm LTR MaLR 1 396 0 1 662 29975 78 2 14 chr15 10099731 10103249 -93391725 + L1Md_F2 LINE L1 2088 5571 -312 1 662 7496 70 10 1 chr15 10103249 10104224 -93390750 + L1Md_F2 LINE L1 5587 6570 -12 1 662 1347 72 0 0 chr15 10104330 10104510 -93390464 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 662 444 304 24 24 chr15 10105961 10106126 -93388848 + Tigger5 DNA MER2_type 2217 2381 -25 1 662 953 169 106 74 chr15 10109057 10109274 -93385700 - URR1B DNA MER1_type 0 225 2 1 662 220 231 45 15 chr15 10109693 10109759 -93385215 + MIRb SINE MIR 105 172 -96 1 662 22 0 0 0 chr15 10110274 10110296 -93384678 + AT_rich Low_complexity Low_complexity 1 22 0 1 662 269 339 118 21 chr15 10110419 10110606 -93384368 - MIRb SINE MIR -57 211 7 1 662 425 374 6 24 chr15 10111085 10111252 -93383722 + RSINE1 SINE B4 2 165 0 1 662 346 319 97 23 chr15 10111349 10111447 -93383527 + MER33 DNA MER1_type 27 124 -200 1 662 267 31 0 0 chr15 10111447 10111479 -93383495 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 662 346 319 97 23 chr15 10111479 10111637 -93383337 + MER33 DNA MER1_type 125 301 -23 1 662 28 0 0 0 chr15 10111969 10111997 -93382977 + AT_rich Low_complexity Low_complexity 1 28 0 1 662 695 243 193 0 chr15 10114251 10114432 -93380542 - B3 SINE B2 0 216 1 1 662 23 0 0 0 chr15 10114433 10114456 -93380518 + AT_rich Low_complexity Low_complexity 1 23 0 1 662 1061 285 78 78 chr15 10114785 10115215 -93379759 - L1_Rod LINE L1 -21 5826 5375 1 662 800 168 0 0 chr15 10115215 10115334 -93379640 - PB1D9 SINE Alu 0 120 2 1 662 1061 285 78 78 chr15 10115334 10115385 -93379589 - L1_Rod LINE L1 -473 5374 5332 1 662 1246 68 0 0 chr15 10115385 10115533 -93379441 - B1_Mus1 SINE Alu 0 148 1 1 662 1061 285 78 78 chr15 10115533 10115740 -93379234 - L1_Rod LINE L1 -516 5331 5137 1 662 180 0 0 0 chr15 10115766 10115786 -93379188 + (A)n Simple_repeat Simple_repeat 1 20 0 1 662 299 254 155 23 chr15 10116016 10116145 -93378829 - MER5B DNA MER1_type 0 178 33 1 662 260 355 147 40 chr15 10117251 10117524 -93377450 - L2a LINE L2 -186 3240 2939 1 662 440 318 70 30 chr15 10118182 10118412 -93376562 - MIR SINE MIR -20 242 4 1 662 231 345 0 43 chr15 10123206 10123300 -93371674 - BC1_Mm scRNA scRNA -56 96 7 1 662 396 297 54 0 chr15 10124226 10124337 -93370637 - MER58A DNA MER1_type -42 182 66 1 662 213 306 0 0 chr15 10125656 10125705 -93369269 + ID4 SINE ID 6 54 -29 1 662 432 0 0 0 chr15 10125710 10125758 -93369216 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 662 210 123 17 34 chr15 10126206 10126265 -93368709 + GA-rich Low_complexity Low_complexity 1 58 0 1 662 189 0 0 0 chr15 10126861 10126882 -93368092 + (A)n Simple_repeat Simple_repeat 1 21 0 1 662 391 252 16 0 chr15 10127363 10127490 -93367484 + (TA)n Simple_repeat Simple_repeat 1 129 0 1 662 394 278 146 47 chr15 10128998 10129251 -93365723 - L1ME2 LINE L1 -118 6046 5769 1 662 457 215 258 15 chr15 10129248 10129446 -93365528 - Lx8 LINE L1 0 7473 7228 1 662 1781 317 94 30 chr15 10129638 10130519 -93364455 - Lx8 LINE L1 -286 7187 6250 1 662 30 59 0 0 chr15 10130606 10130657 -93364317 + AT_rich Low_complexity Low_complexity 1 51 0 1 662 458 342 77 8 chr15 10130836 10131095 -93363879 - L1M6 LINE L1 -5603 893 617 1 662 600 53 0 0 chr15 10131728 10131804 -93363170 + (CATAA)n Simple_repeat Simple_repeat 2 77 0 1 662 689 216 63 23 chr15 10131832 10132007 -93362967 + MTD LTR MaLR 104 285 -134 1 662 801 0 0 0 chr15 10132012 10132101 -93362873 + (TTCCC)n Simple_repeat Simple_repeat 1 89 0 1 662 465 19 0 0 chr15 10133038 10133092 -93361882 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 662 197 349 0 0 chr15 10134337 10134403 -93360571 - MIRc SINE MIR -116 152 87 1 662 774 283 75 36 chr15 10134656 10134909 -93360065 - B4A SINE B4 0 292 30 1 662 29 28 0 0 chr15 10135223 10135259 -93359715 + AT_rich Low_complexity Low_complexity 1 36 0 1 662 411 345 0 0 chr15 10137026 10137139 -93357835 + PB1D10 SINE Alu 3 115 -2 1 662 203 234 0 0 chr15 10137386 10137433 -93357541 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 662 269 286 30 45 chr15 10137467 10137599 -93357375 - MIRb SINE MIR -75 193 64 1 662 479 308 58 11 chr15 10138401 10138575 -93356399 + B3A SINE B2 1 182 -16 1 662 1436 212 28 70 chr15 10138586 10138941 -93356033 + ORR1D1 LTR MaLR 10 349 -25 1 662 207 200 54 18 chr15 10138971 10139027 -93355947 + GA-rich Low_complexity Low_complexity 3 60 0 1 662 186 226 36 36 chr15 10139374 10139429 -93355545 - MIRc SINE MIR -82 186 132 1 662 332 41 41 0 chr15 10140431 10140480 -93354494 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 1 662 31 0 0 0 chr15 10142048 10142079 -93352895 + AT_rich Low_complexity Low_complexity 1 31 0 1 662 201 94 0 0 chr15 10143815 10143847 -93351127 + (CAGA)n Simple_repeat Simple_repeat 1 32 0 1 662 508 276 30 0 chr15 10144053 10144187 -93350787 - RSINE1 SINE B4 -24 141 4 1 662 785 291 52 90 chr15 10144215 10144321 -93350653 - L1MA4 LINE L1 -373 5927 5840 1 662 435 128 0 0 chr15 10144321 10144407 -93350567 + (TAGA)n Simple_repeat Simple_repeat 1 86 0 1 662 785 291 52 90 chr15 10144407 10144824 -93350150 - L1MA4 LINE L1 -461 5839 5424 1 662 324 321 64 21 chr15 10144828 10144968 -93350006 - B1F2 SINE Alu -3 146 1 1 662 829 255 79 15 chr15 10145009 10145212 -93349762 - B3 SINE B2 0 216 1 1 662 302 224 47 119 chr15 10145214 10145407 -93349567 - L1M5 LINE L1 -1008 5436 5258 1 662 444 19 0 0 chr15 10146369 10146422 -93348552 + (GTTTG)n Simple_repeat Simple_repeat 3 55 0 1 662 1073 326 53 16 chr15 10146469 10146961 -93348013 - L1MC2 LINE L1 -71 6273 5764 1 662 198 314 39 0 chr15 10149327 10149378 -93345596 - L2c LINE L2 -44 3343 3291 1 662 704 291 101 46 chr15 10150472 10150776 -93344198 - MLT1C LTR MaLR -2 465 181 1 662 307 174 35 23 chr15 10150784 10150955 -93344019 + (TCTG)n Simple_repeat Simple_repeat 2 174 0 1 662 614 153 7 0 chr15 10150944 10151088 -93343886 + CT-rich Low_complexity Low_complexity 2 146 0 1 662 353 285 101 65 chr15 10151145 10151314 -93343660 - MLT1C LTR MaLR -287 180 6 1 662 10428 109 145 12 chr15 10151378 10153186 -93341788 - L1_Mur1 LINE L1 -1396 4490 2443 2 662 182 298 18 0 chr15 10153967 10154024 -93340950 + MIRc SINE MIR 83 140 -128 2 662 856 265 37 14 chr15 10154989 10155207 -93339767 - B4A SINE B4 -68 224 2 2 662 254 301 0 0 chr15 10155250 10155323 -93339651 - Charlie5 DNA MER1_type -171 2453 2381 2 662 288 212 0 96 chr15 10157659 10157732 -93337242 + RSINE1 SINE B4 100 165 0 2 662 522 152 0 0 chr15 10157739 10157831 -93337143 + (TA)n Simple_repeat Simple_repeat 2 93 0 2 662 21 36 0 0 chr15 10158147 10158175 -93336799 + AT_rich Low_complexity Low_complexity 1 28 0 2 662 2728 189 63 30 chr15 10158176 10158748 -93336226 - Lx9 LINE L1 -341 7303 6713 2 662 282 212 20 10 chr15 10158803 10158903 -93336071 + (TATATG)n Simple_repeat Simple_repeat 6 106 0 2 662 761 232 12 12 chr15 10158911 10159077 -93335897 - Lx9 LINE L1 -950 6694 6529 2 662 243 0 0 0 chr15 10159115 10159142 -93335832 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2 662 194 321 17 76 chr15 10159178 10159296 -93335678 + MIR SINE MIR 14 124 -138 2 662 1263 55 0 7 chr15 10161778 10161926 -93333048 + B1_Mm SINE Alu 1 147 0 2 662 216 0 0 0 chr15 10161932 10161956 -93333018 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 662 275 122 0 20 chr15 10162416 10162466 -93332508 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 662 234 0 0 0 chr15 10162466 10162492 -93332482 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 662 1264 141 6 0 chr15 10162775 10162987 -93331987 - L1_Mur2 LINE L1 -597 5286 5066 2 662 366 234 74 32 chr15 10163054 10163179 -93331795 + L1_Rod LINE L1 5672 5821 -523 2 662 674 277 109 54 chr15 10163203 10163817 -93331157 + L1MB5 LINE L1 5525 6172 -2 2 662 1032 135 0 6 chr15 10163987 10164144 -93330830 + B2_Mm2 SINE B2 3 158 -37 2 662 180 0 0 0 chr15 10164144 10164164 -93330810 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2 662 1629 78 15 0 chr15 10164495 10164701 -93330273 - L1_Mus1 LINE L1 0 6567 6359 2 662 1247 61 67 0 chr15 10165376 10165541 -93329433 + B2_Mm2 SINE B2 15 190 -5 2 662 207 0 0 0 chr15 10166226 10166249 -93328725 + (G)n Simple_repeat Simple_repeat 1 23 0 2 662 342 0 0 0 chr15 10166987 10167025 -93327949 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 662 1407 56 17 0 chr15 10167440 10167618 -93327356 + B2_Mm2 SINE B2 1 181 -14 2 662 396 344 39 7 chr15 10168963 10169118 -93325856 + RSINE1 SINE B4 4 163 -2 2 662 31 0 0 0 chr15 10169142 10169173 -93325801 + AT_rich Low_complexity Low_complexity 1 31 0 2 662 868 327 58 53 chr15 10169304 10169721 -93325253 + MTD LTR MaLR 1 419 0 2 662 25 31 0 0 chr15 10169845 10169877 -93325097 + AT_rich Low_complexity Low_complexity 1 32 0 2 662 394 111 123 0 chr15 10169878 10169959 -93325015 - Lx2A LINE L1 -7 7001 6911 2 662 252 0 0 0 chr15 10169966 10169994 -93324980 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 2 662 433 294 214 39 chr15 10170979 10171570 -93323404 - L1MEg LINE L1 -3558 2588 1895 2 662 198 0 0 0 chr15 10171753 10171775 -93323199 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 662 1148 131 0 6 chr15 10171857 10172033 -93322941 - B2_Mm2 SINE B2 -19 176 2 2 662 1113 73 26 16 chr15 10172427 10172734 -93322240 + (TAGA)n Simple_repeat Simple_repeat 1 309 0 2 662 5205 128 45 25 chr15 10173063 10173992 -93320982 - Lx LINE L1 -7 6647 5725 2 662 395 309 8 31 chr15 10174039 10174166 -93320808 + ID_B1 SINE B4 98 221 -3 2 662 445 165 10 10 chr15 10174243 10174341 -93320633 + GA-rich Low_complexity Low_complexity 4 101 0 2 662 360 0 0 0 chr15 10174343 10174383 -93320591 + (GAA)n Simple_repeat Simple_repeat 3 42 0 2 662 234 150 0 0 chr15 10174383 10174423 -93320551 + (AGGGGG)n Simple_repeat Simple_repeat 5 44 0 2 662 838 152 6 6 chr15 10174446 10174605 -93320369 + GA-rich Low_complexity Low_complexity 3 161 0 2 662 477 0 0 0 chr15 10176146 10176199 -93318775 + (GGAA)n Simple_repeat Simple_repeat 2 54 0 2 662 2066 126 30 12 chr15 10176276 10176613 -93318361 - RLTR15 LTR ERVK -16 343 1 2 662 189 195 0 0 chr15 10179904 10179945 -93315029 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 662 551 169 0 7 chr15 10179944 10180093 -93314881 + GA-rich Low_complexity Low_complexity 1 148 0 2 662 402 305 120 17 chr15 10180100 10180363 -93314611 - MER58B DNA MER1_type -24 317 9 2 662 303 322 2 22 chr15 10182244 10182392 -93312582 + MLT1A1 LTR MaLR 236 396 -12 2 662 315 377 0 34 chr15 10182783 10182901 -93312073 - PB1D10 SINE Alu -3 114 1 2 662 1637 271 96 11 chr15 10183067 10183810 -93311164 - L1MA8 LINE L1 -232 6059 5254 2 662 464 346 37 37 chr15 10183864 10184185 -93310789 - L2 LINE L2 -565 2854 2534 2 662 189 0 0 0 chr15 10184404 10184425 -93310549 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 662 276 287 79 32 chr15 10185191 10185317 -93309657 + YREP_Mm Unknown Unknown 163 294 -1518 2 662 630 232 64 0 chr15 10185207 10185332 -93309642 - ID_B1 SINE B4 -3 221 89 2 662 1794 41 0 18 chr15 10186117 10186342 -93308632 - L1_Mus1 LINE L1 -1 6566 6346 2 662 690 266 48 26 chr15 10187574 10187763 -93307211 - MLT1G LTR MaLR -3 588 396 2 662 246 315 158 40 chr15 10188114 10188266 -93306708 - MLT1G LTR MaLR -243 205 36 2 662 366 308 60 148 chr15 10189156 10189339 -93305635 - B4A SINE B4 -123 169 3 2 662 1862 169 103 8 chr15 10190176 10190527 -93304447 - ORR1C2 LTR MaLR 0 384 1 2 662 21 36 0 0 chr15 10190774 10190802 -93304172 + AT_rich Low_complexity Low_complexity 1 28 0 2 662 3488 31 51 0 chr15 10191012 10191216 -93303758 - RLTR10C LTR ERVK 0 436 233 2 662 324 0 0 0 chr15 10191216 10191252 -93303722 + (TC)n Simple_repeat Simple_repeat 2 37 0 2 662 3488 31 51 0 chr15 10191252 10191462 -93303512 - RLTR10C LTR ERVK -204 232 2 2 662 378 0 0 0 chr15 10193485 10193527 -93301447 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 2 662 240 59 0 0 chr15 10194080 10194114 -93300860 + (A)n Simple_repeat Simple_repeat 1 34 0 2 662 294 284 15 0 chr15 10194612 10194679 -93300295 - MIRm SINE MIR 0 276 209 2 662 235 325 26 13 chr15 10195692 10195770 -93299204 - PB1 SINE Alu -13 114 36 2 662 486 0 0 0 chr15 10195798 10195852 -93299122 + (TC)n Simple_repeat Simple_repeat 2 55 0 2 662 413 304 24 37 chr15 10195935 10196099 -93298875 - MIR SINE MIR -31 231 70 2 662 211 257 56 14 chr15 10196408 10196479 -93298495 + PB1D10 SINE Alu 10 83 -34 2 662 200 150 50 0 chr15 10196479 10196519 -93298455 + GA-rich Low_complexity Low_complexity 1 42 0 2 662 225 0 0 0 chr15 10196883 10196908 -93298066 + (T)n Simple_repeat Simple_repeat 1 25 0 2 662 2016 202 2 30 chr15 10198774 10199207 -93295767 - MTC LTR MaLR 0 421 1 2 662 275 239 121 57 chr15 10199633 10199757 -93295217 - L1MB2 LINE L1 -9 6162 6031 2 662 291 139 13 40 chr15 10200846 10200921 -93294053 + CT-rich Low_complexity Low_complexity 5 77 0 2 662 271 262 21 129 chr15 10201047 10201187 -93293787 + MER20 DNA MER1_type 94 218 -1 2 662 1649 134 61 138 chr15 10201661 10202068 -93292906 - ORR1C1 LTR MaLR 0 378 3 2 662 668 302 80 167 chr15 10203161 10203713 -93291261 - MLT2B3 LTR ERVL -8 512 9 2 662 528 30 0 0 chr15 10204411 10204477 -93290497 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 662 536 270 34 19 chr15 10204854 10205062 -93289912 - L1MA4 LINE L1 -372 5928 5718 2 662 478 337 77 35 chr15 10205345 10205606 -93289368 - MLT1C LTR MaLR -4 463 192 2 662 391 244 164 8 chr15 10205618 10205746 -93289228 - MLT1C LTR MaLR -314 153 6 2 662 263 321 73 98 chr15 10207073 10207318 -93287656 - MLT1A LTR MaLR -62 312 74 2 662 395 254 90 21 chr15 10208096 10208285 -93286689 - L1MB7 LINE L1 -1 6183 5982 2 662 606 261 117 47 chr15 10208366 10208458 -93286516 - L1MA4 LINE L1 -1063 5080 4981 2 662 1106 29 51 0 chr15 10208458 10208595 -93286379 - B1_Mus1 SINE Alu 0 148 5 2 662 606 261 117 47 chr15 10208595 10208800 -93286174 - L1MA4 LINE L1 -1163 4980 4762 2 662 21 0 0 0 chr15 10210692 10210713 -93284261 + AT_rich Low_complexity Low_complexity 1 21 0 2 662 2285 131 52 2 chr15 10210721 10211127 -93283847 - L1_Mm LINE L1 -891 4992 4567 2 662 183 42 0 0 chr15 10211181 10211205 -93283769 + (TA)n Simple_repeat Simple_repeat 2 25 0 2 662 632 82 100 0 chr15 10211229 10211339 -93283635 - L1Md_F2 LINE L1 0 6582 6462 2 662 342 45 0 0 chr15 10211631 10211675 -93283299 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 662 207 0 0 0 chr15 10211765 10211788 -93283186 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 662 3888 190 54 8 chr15 10212152 10212952 -93282022 + Lx5 LINE L1 6214 7050 0 2 662 310 218 55 0 chr15 10212991 10213101 -93281873 + Lx9 LINE L1 7521 7636 -8 2 662 186 383 25 0 chr15 10213439 10213520 -93281454 - L3 LINE CR1 -122 4367 4285 2 662 256 296 42 0 chr15 10213894 10213965 -93281009 + MLT1A0 LTR MaLR 225 298 -67 2 662 1211 302 43 33 chr15 10214314 10214824 -93280150 - Lx9 LINE L1 -182 7462 6948 2 662 1116 294 48 29 chr15 10214822 10215278 -93279696 + Lx9 LINE L1 6473 6937 -707 2 662 1147 189 24 5 chr15 10215354 10215567 -93279407 + URR1B DNA MER1_type 9 225 0 2 662 891 292 52 12 chr15 10215608 10215951 -93279023 - Lx8 LINE L1 -117 7356 7000 2 662 3968 269 50 34 chr15 10217929 10220487 -93274487 - Lx7 LINE L1 -395 7301 4695 2 662 937 213 12 4 chr15 10220482 10220740 -93274234 + L1_Mur3 LINE L1 3343 3602 -2278 2 662 497 309 26 116 chr15 10222147 10222458 -93272516 - B4A SINE B4 -8 284 2 2 662 210 162 0 26 chr15 10222965 10223003 -93271971 + (CATA)n Simple_repeat Simple_repeat 4 40 0 2 662 264 30 0 0 chr15 10223020 10223053 -93271921 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 662 338 312 91 39 chr15 10223053 10223283 -93271691 + L1MC4 LINE L1 7799 8040 -2 2 663 284 313 0 0 chr15 10225968 10226035 -93268939 + ID4_ SINE ID 6 72 -11 2 663 253 0 0 51 chr15 10226168 10226207 -93268767 + (TTTTG)n Simple_repeat Simple_repeat 5 41 0 3 663 546 319 21 5 chr15 10226244 10226430 -93268544 - MER3 DNA MER1_type -20 189 1 3 663 2890 27 65 34 chr15 10228093 10228477 -93266497 + MTA_Mm LTR MaLR 1 396 0 3 663 233 352 93 0 chr15 10229096 10229235 -93265739 - MLT1L LTR MaLR -10 600 449 3 663 255 275 151 21 chr15 10229414 10229507 -93265467 - MLT1L LTR MaLR -503 107 3 3 663 740 190 0 11 chr15 10229790 10229904 -93265070 + (TGGA)n Simple_repeat Simple_repeat 1 112 0 3 663 1029 140 0 0 chr15 10229904 10230082 -93264892 + (TGGG)n Simple_repeat Simple_repeat 3 180 0 3 663 740 184 0 16 chr15 10230082 10230191 -93264783 + (TGGA)n Simple_repeat Simple_repeat 4 111 0 3 663 423 324 57 29 chr15 10231442 10231687 -93263287 - L1ME4a LINE L1 -275 5849 5598 3 663 252 100 0 0 chr15 10231783 10231823 -93263151 + (A)n Simple_repeat Simple_repeat 1 40 0 3 663 558 162 0 0 chr15 10233771 10233907 -93261067 + (TCTA)n Simple_repeat Simple_repeat 2 137 0 3 663 288 298 12 12 chr15 10235064 10235144 -93259830 + ID4_ SINE ID 12 91 -61 3 663 227 347 84 0 chr15 10235653 10235748 -93259226 - MLT1J2 LTR MaLR -308 140 38 3 663 423 248 0 37 chr15 10237392 10237501 -93257473 + MIRc SINE MIR 52 156 -112 3 663 254 340 48 39 chr15 10237539 10237643 -93257331 + B1F SINE Alu 36 140 -9 3 663 243 314 43 0 chr15 10237657 10237727 -93257247 + ID4_ SINE ID 2 74 -9 3 663 197 291 0 10 chr15 10237727 10237831 -93257143 + GA-rich Low_complexity Low_complexity 3 105 0 3 663 518 283 64 13 chr15 10237865 10238090 -93256884 - MER2 DNA MER2_type -90 255 6 3 663 346 298 145 27 chr15 10239486 10239587 -93255387 + Lx8 LINE L1 7218 7326 -147 3 663 666 0 0 0 chr15 10239587 10239661 -93255313 + (GTTTG)n Simple_repeat Simple_repeat 2 75 0 3 663 346 298 145 27 chr15 10239661 10239780 -93255194 + Lx8 LINE L1 7327 7463 -10 3 663 329 310 98 33 chr15 10239796 10239986 -93254988 + L1ME3B LINE L1 5723 5921 -258 3 663 1392 41 0 0 chr15 10242172 10242343 -93252631 + (TCTCCC)n Simple_repeat Simple_repeat 2 172 0 3 663 385 272 33 178 chr15 10242960 10243264 -93251710 + MER121 Unknown Unknown 115 374 -38 3 663 215 31 0 30 chr15 10243605 10243638 -93251336 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 3 663 180 0 0 0 chr15 10244071 10244091 -93250883 + (G)n Simple_repeat Simple_repeat 1 20 0 3 663 187 321 162 18 chr15 10244253 10244364 -93250610 + MIR SINE MIR 28 154 -108 3 663 206 312 28 23 chr15 10244635 10244812 -93250162 + (TATATG)n Simple_repeat Simple_repeat 1 178 0 3 663 842 109 0 16 chr15 10244988 10245109 -93249865 - B1_Mus1 SINE Alu -2 146 28 3 663 765 340 64 5 chr15 10245990 10246366 -93248608 + Lx8 LINE L1 6917 7314 -159 3 663 180 111 0 0 chr15 10246392 10246419 -93248555 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 663 276 155 0 0 chr15 10246419 10246490 -93248484 + GA-rich Low_complexity Low_complexity 2 72 0 3 663 26 0 0 0 chr15 10246588 10246614 -93248360 + AT_rich Low_complexity Low_complexity 1 26 0 3 663 213 208 26 13 chr15 10246650 10246728 -93248246 + GA-rich Low_complexity Low_complexity 3 81 0 3 663 428 290 0 0 chr15 10247897 10248004 -93246970 + PB1D10 SINE Alu 1 107 -10 3 663 213 266 49 25 chr15 10249431 10249512 -93245462 - ID4 SINE ID 0 83 1 3 663 201 175 0 0 chr15 10249783 10249823 -93245151 + (TAA)n Simple_repeat Simple_repeat 3 42 0 3 663 205 29 29 29 chr15 10250192 10250227 -93244747 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 663 1578 249 31 24 chr15 10250230 10250649 -93244325 - Lx8 LINE L1 -138 7335 6914 3 663 244 244 0 13 chr15 10251091 10251170 -93243804 - Lx6 LINE L1 -4 7456 7379 3 663 182 327 0 0 chr15 10252019 10252071 -93242903 - L2c LINE L2 -82 3305 3254 3 663 5563 55 0 0 chr15 10253357 10254048 -93240926 - L1Md_F2 LINE L1 -1 6581 5891 3 663 4604 52 2 2 chr15 10254049 10254665 -93240309 + L1_Mm LINE L1 3668 4283 -1600 3 663 663 147 0 0 chr15 10254740 10254842 -93240132 - B1_Mur4 SINE Alu 0 150 49 3 663 254 328 70 13 chr15 10257126 10257264 -93237710 - MIRb SINE MIR -60 208 61 3 663 309 309 16 49 chr15 10257310 10257494 -93237480 + GA-rich Low_complexity Low_complexity 3 180 0 3 663 261 98 0 0 chr15 10259130 10259171 -93235803 + (A)n Simple_repeat Simple_repeat 1 41 0 3 663 216 231 0 0 chr15 10259283 10259335 -93235639 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 663 245 235 59 0 chr15 10261660 10261711 -93233263 + MIR SINE MIR 19 72 -136 3 663 189 0 0 0 chr15 10263364 10263385 -93231589 + (A)n Simple_repeat Simple_repeat 1 21 0 3 663 2662 97 43 8 chr15 10265767 10266161 -93228813 - L1Md_F2 LINE L1 -12 6570 6163 3 663 24 0 0 0 chr15 10268066 10268090 -93226884 + AT_rich Low_complexity Low_complexity 1 24 0 3 663 1013 24 8 0 chr15 10268175 10268299 -93226675 + (GTTTG)n Simple_repeat Simple_repeat 4 128 0 3 663 268 301 44 38 chr15 10269278 10269461 -93225513 - L1M5 LINE L1 -647 5593 5410 3 663 506 350 69 51 chr15 10269907 10270359 -93224615 - L1M5 LINE L1 -1710 4436 3977 3 663 831 201 130 5 chr15 10270713 10270913 -93224061 - URR1A DNA MER1_type -1 225 1 3 663 323 78 20 0 chr15 10271082 10271133 -93223841 + (TTGG)n Simple_repeat Simple_repeat 2 53 0 3 663 483 18 0 0 chr15 10271170 10271226 -93223748 + (TTG)n Simple_repeat Simple_repeat 2 57 0 3 663 234 0 0 0 chr15 10271415 10271441 -93223533 + (CCA)n Simple_repeat Simple_repeat 2 27 0 3 663 572 25 0 12 chr15 10271890 10271971 -93223003 - L1Md_F2 LINE L1 -2 6580 6501 3 663 258 56 0 0 chr15 10271977 10272013 -93222961 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 3 663 571 325 64 26 chr15 10273233 10273546 -93221428 + L1MCb LINE L1 13 337 -5708 3 663 459 0 0 0 chr15 10273682 10273733 -93221241 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 663 225 159 0 0 chr15 10273887 10273931 -93221043 + (TTG)n Simple_repeat Simple_repeat 2 45 0 3 663 401 241 173 14 chr15 10274067 10274206 -93220768 + RSINE1 SINE B4 4 164 -1 3 663 251 149 81 1 chr15 10274293 10274367 -93220607 + PB1D10 SINE Alu 33 118 -2 3 663 239 277 67 38 chr15 10274543 10274648 -93220326 + RMER12 LTR ERVK 720 827 -495 3 663 281 193 0 64 chr15 10276509 10276603 -93218371 + (TCTCTG)n Simple_repeat Simple_repeat 2 89 0 3 663 414 69 0 0 chr15 10276610 10276668 -93218306 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 663 246 105 0 0 chr15 10276668 10276706 -93218268 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 663 980 225 60 0 chr15 10277848 10278030 -93216944 + B3A SINE B2 3 195 -3 3 663 315 0 0 0 chr15 10278497 10278532 -93216442 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 663 422 222 12 0 chr15 10279088 10279169 -93215805 - ID4_ SINE ID -1 82 1 3 663 306 347 34 20 chr15 10279169 10279316 -93215658 - B1F SINE Alu 0 149 1 3 663 482 353 78 60 chr15 10279430 10279777 -93215197 - ORR1E LTR MaLR -6 353 1 3 663 1030 294 269 24 chr15 10279782 10280417 -93214557 - ORR1E-int LTR MaLR -73 1507 717 3 663 1283 150 87 0 chr15 10280424 10280631 -93214343 + URR1A DNA MER1_type 2 226 0 3 663 34766 60 4 5 chr15 10280645 10285934 -93209040 + L1Md_F2 LINE L1 303 5585 -298 3 663 8732 41 4 2 chr15 10285935 10286929 -93208045 + L1Md_F2 LINE L1 5587 6582 0 3 663 1720 325 39 11 chr15 10286929 10287546 -93207428 - ORR1E-int LTR MaLR -944 636 3 3 663 553 304 70 73 chr15 10287550 10287908 -93207066 - ORR1E LTR MaLR 0 359 3 3 663 251 274 20 31 chr15 10288056 10288154 -93206820 + CT-rich Low_complexity Low_complexity 5 101 0 3 663 357 348 42 33 chr15 10288574 10288815 -93206159 - MER20B DNA MER1_type 0 783 541 3 663 708 108 0 0 chr15 10288824 10288954 -93206020 + (GA)n Simple_repeat Simple_repeat 2 131 0 3 663 1186 272 11 33 chr15 10289441 10289492 -93205482 - B4 SINE B4 -22 270 223 3 663 285 51 0 0 chr15 10289492 10289531 -93205443 + (TTTG)n Simple_repeat Simple_repeat 3 41 0 3 663 1186 272 11 33 chr15 10289531 10289717 -93205257 - B4 SINE B4 -70 222 37 3 663 2092 108 106 13 chr15 10289717 10290018 -93204956 - ORR1A4 LTR MaLR 0 329 1 3 663 1186 272 11 33 chr15 10290018 10290053 -93204921 - B4 SINE B4 -256 36 3 3 663 11949 67 2 4 chr15 10290186 10292466 -93202508 - L1Md_F2 LINE L1 0 6582 4307 3 663 4924 140 53 8 chr15 10292458 10293963 -93201011 - L1Md_F2 LINE L1 -4118 1765 191 3 663 428 146 173 8 chr15 10293964 10294074 -93200900 + ORR1C2 LTR MaLR 258 384 0 3 663 1071 297 61 32 chr15 10294199 10294756 -93200218 - L1MA7 LINE L1 -302 5989 5417 3 663 4246 44 0 0 chr15 10295301 10295775 -93199199 + L1Md_T LINE L1 6108 6581 -1 3 663 832 265 168 22 chr15 10296047 10296363 -93198611 - Lx8 LINE L1 0 7473 7112 3 663 428 0 0 19 chr15 10296612 10296665 -93198309 + (CATA)n Simple_repeat Simple_repeat 2 53 0 3 663 1719 247 27 93 chr15 10296827 10297382 -93197592 - RLTR11A2 LTR ERVK -1 526 10 3 663 204 158 0 0 chr15 10297690 10297728 -93197246 + GA-rich Low_complexity Low_complexity 3 40 0 3 663 3530 22 141 9 chr15 10298000 10298420 -93196554 - IAPLTR2_Mm LTR ERVK 0 475 1 3 663 234 321 0 0 chr15 10299289 10299373 -93195601 + T-rich Low_complexity Low_complexity 1 84 0 3 663 618 82 0 0 chr15 10299434 10299519 -93195455 + (TGAG)n Simple_repeat Simple_repeat 1 85 0 3 663 1194 82 0 7 chr15 10300253 10300401 -93194573 + B1_Mus1 SINE Alu 2 148 0 3 663 933 175 5 0 chr15 10300418 10300638 -93194336 + GA-rich Low_complexity Low_complexity 1 220 0 3 663 420 239 0 0 chr15 10301691 10301833 -93193141 + (CA)n Simple_repeat Simple_repeat 1 142 0 3 663 288 148 0 0 chr15 10302000 10302061 -93192913 + (TCCC)n Simple_repeat Simple_repeat 2 62 0 3 663 351 56 83 0 chr15 10302070 10302142 -93192832 + (TCTCTG)n Simple_repeat Simple_repeat 2 79 0 3 663 420 20 0 0 chr15 10302151 10302200 -93192774 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 663 555 258 81 30 chr15 10302288 10302555 -93192419 + MTE2a LTR MaLR 1 350 -29 3 663 712 207 0 0 chr15 10302578 10302699 -93192275 - B1_Mur4 SINE Alu -9 141 21 3 663 458 159 11 0 chr15 10302704 10302792 -93192182 + (CA)n Simple_repeat Simple_repeat 2 90 0 4 663 279 274 0 0 chr15 10302824 10302886 -93192088 + tRNA-Ala-GCY_ tRNA tRNA 5 66 -9 4 663 343 246 152 3 chr15 10302915 10303038 -93191936 - PB1D9 SINE Alu -1 148 2 4 663 198 0 0 0 chr15 10303055 10303077 -93191897 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 663 234 62 0 0 chr15 10303785 10303817 -93191157 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 663 22 0 0 0 chr15 10304215 10304237 -93190737 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 1478 73 17 0 chr15 10304238 10304417 -93190557 + B2_Mm2 SINE B2 1 182 -13 4 663 342 244 44 50 chr15 10304474 10304655 -93190319 - Lx9 LINE L1 -7 7637 7458 4 663 517 262 214 30 chr15 10304664 10304748 -93190226 - Lx9 LINE L1 -127 7517 7432 4 663 252 0 0 0 chr15 10304748 10304776 -93190198 + (TTG)n Simple_repeat Simple_repeat 3 30 0 4 663 517 262 214 30 chr15 10304776 10305022 -93189952 - Lx9 LINE L1 -213 7431 7127 4 663 195 140 37 65 chr15 10306258 10306365 -93188609 + A-rich Low_complexity Low_complexity 2 105 0 4 663 325 217 8 32 chr15 10306369 10306493 -93188481 + (TTATA)n Simple_repeat Simple_repeat 2 122 0 4 663 183 118 65 13 chr15 10306524 10306601 -93188373 + (TATAA)n Simple_repeat Simple_repeat 5 85 0 4 663 432 0 0 0 chr15 10307809 10307857 -93187117 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 663 207 88 0 0 chr15 10308914 10308948 -93186026 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 4 663 535 213 7 56 chr15 10308962 10309074 -93185900 + Lx4B LINE L1 6889 6999 -59 4 663 216 0 0 0 chr15 10309074 10309098 -93185876 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 663 535 213 7 56 chr15 10309098 10309129 -93185845 + Lx4B LINE L1 7000 7025 -33 4 663 695 192 83 23 chr15 10309163 10309296 -93185678 - B1_Mur3 SINE Alu -8 141 1 4 663 373 178 44 8 chr15 10309444 10309519 -93185455 + B1_Mur4 SINE Alu 42 120 0 4 663 283 303 28 75 chr15 10310007 10310114 -93184860 - MARNA DNA Mariner -459 127 26 4 663 21 36 0 0 chr15 10310901 10310929 -93184045 + AT_rich Low_complexity Low_complexity 1 28 0 4 663 181 323 29 57 chr15 10312265 10312370 -93182604 + MIRm SINE MIR 109 210 -66 4 663 2933 181 45 9 chr15 10312797 10312958 -93182016 - Lx6 LINE L1 -6 7454 7281 4 663 1138 96 7 0 chr15 10312958 10313104 -93181870 + B1_Mus2 SINE Alu 1 147 0 4 663 2933 181 45 9 chr15 10313104 10313471 -93181503 - Lx6 LINE L1 -180 7280 6908 4 663 414 0 0 0 chr15 10313535 10313581 -93181393 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 663 2915 31 0 48 chr15 10314988 10315234 -93179740 - L1_Mus2 LINE L1 -530 6036 5808 4 663 7380 40 1 0 chr15 10315234 10316061 -93178913 + L1Md_F2 LINE L1 5743 6570 -12 4 663 2915 31 0 48 chr15 10316061 10316190 -93178784 - L1_Mus2 LINE L1 -759 5807 5679 4 663 4220 48 16 66 chr15 10316190 10316750 -93178224 + L1_Mus2 LINE L1 6035 6566 0 4 663 21 0 0 0 chr15 10319032 10319053 -93175921 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 1508 66 16 0 chr15 10319062 10319244 -93175730 + B2_Mm2 SINE B2 2 186 -9 4 663 228 259 58 12 chr15 10319946 10320032 -93174942 - MamRep434 DNA TcMar 0 426 337 4 663 234 0 0 0 chr15 10321623 10321649 -93173325 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 663 998 125 12 0 chr15 10322280 10322440 -93172534 + URR1A DNA MER1_type 65 226 0 4 663 21 0 0 0 chr15 10322524 10322545 -93172429 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 554 342 86 51 chr15 10322965 10323338 -93171636 - MLT1B LTR MaLR 0 390 5 4 663 2147 284 43 22 chr15 10324040 10324674 -93170300 - Lx8 LINE L1 -1 7472 6826 4 663 235 204 0 0 chr15 10324680 10324724 -93170250 + Lx8 LINE L1 6725 6768 -705 4 663 252 0 0 0 chr15 10324822 10324850 -93170124 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 4 663 811 163 174 76 chr15 10325189 10325443 -93169531 - Lx6 LINE L1 0 7696 7379 4 663 351 0 0 0 chr15 10325452 10325491 -93169483 + (TAGA)n Simple_repeat Simple_repeat 3 41 0 4 663 367 294 78 0 chr15 10325494 10325596 -93169378 - Lx7 LINE L1 -711 6985 6876 4 663 600 14 0 0 chr15 10325601 10325670 -93169304 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 4 663 2272 155 24 3 chr15 10325707 10326088 -93168886 - Lx6 LINE L1 -750 6710 6322 4 663 596 166 4 86 chr15 10326087 10326227 -93168747 - L1_Mur3 LINE L1 -1353 4790 4637 4 663 378 0 0 0 chr15 10326229 10326271 -93168703 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 663 3403 172 61 14 chr15 10326288 10326977 -93167997 - Lx7 LINE L1 -1389 6307 5587 4 663 477 312 86 7 chr15 10326982 10327172 -93167802 - RMER19B LTR ERVK -192 419 153 4 663 787 195 91 70 chr15 10327232 10327431 -93167543 - MurERV4_19-int LTR ERVK -5449 331 129 4 663 742 167 14 14 chr15 10327451 10327597 -93167377 + RMER19B LTR ERVK 755 900 -2 4 663 318 50 0 0 chr15 10327634 10327674 -93167300 + (TTTTC)n Simple_repeat Simple_repeat 2 41 0 4 663 395 320 52 13 chr15 10328046 10328201 -93166773 + RSINE1 SINE B4 5 165 0 4 663 22 56 0 0 chr15 10328209 10328245 -93166729 + AT_rich Low_complexity Low_complexity 1 36 0 4 663 222 195 0 0 chr15 10329832 10329873 -93165101 + C-rich Low_complexity Low_complexity 4 44 0 4 663 216 97 0 0 chr15 10330157 10330188 -93164786 + (T)n Simple_repeat Simple_repeat 1 31 0 4 663 282 179 0 0 chr15 10330901 10330957 -93164017 + (CTG)n Simple_repeat Simple_repeat 1 56 0 4 663 234 244 73 0 chr15 10331082 10331164 -93163810 - L1MA6 LINE L1 -1 6299 6212 4 663 1150 50 0 0 chr15 10331174 10331315 -93163659 + L1Md_A LINE L1 6442 6582 0 4 663 7846 88 7 12 chr15 10331331 10333154 -93161820 + L1Md_F3 LINE L1 407 2217 -3666 4 663 5540 57 3 0 chr15 10333153 10333833 -93161141 + L1Md_F3 LINE L1 4910 5591 -292 4 663 8841 34 2 1 chr15 10333833 10334817 -93160157 + L1Md_F3 LINE L1 5600 6584 0 4 663 330 242 41 21 chr15 10334860 10334957 -93160017 - L1MA6 LINE L1 -135 6165 6067 4 663 6963 114 39 9 chr15 10335076 10336107 -93158867 - Lx LINE L1 0 6654 5593 4 663 181 348 107 48 chr15 10336280 10336467 -93158507 - L2c LINE L2 -22 3365 3168 4 663 264 284 25 0 chr15 10336663 10336744 -93158230 - MIR SINE MIR -109 153 71 4 663 1777 221 86 93 chr15 10338439 10338974 -93156000 + Lx5 LINE L1 6520 7050 0 4 663 23 0 0 0 chr15 10338974 10338997 -93155977 + AT_rich Low_complexity Low_complexity 1 23 0 4 663 231 351 94 33 chr15 10339459 10339671 -93155303 + MLT1L LTR MaLR 52 276 -334 4 663 482 285 72 10 chr15 10339753 10339948 -93155026 + MLT1L LTR MaLR 391 597 -13 4 663 289 286 135 48 chr15 10340052 10340250 -93154724 - MER113 DNA MER1_type -5 516 295 4 663 773 285 93 26 chr15 10340250 10340520 -93154454 + B4 SINE B4 3 290 -2 4 663 289 286 135 48 chr15 10340520 10340736 -93154238 - MER113 DNA MER1_type -227 294 67 4 663 244 330 54 38 chr15 10340960 10341122 -93153852 + MIRb SINE MIR 6 175 -93 4 663 325 282 14 99 chr15 10341270 10341324 -93153650 + B4A SINE B4 33 175 -117 4 663 682 185 7 49 chr15 10341324 10341466 -93153508 + B1_Mur4 SINE Alu 2 137 -13 4 663 325 282 14 99 chr15 10341466 10341486 -93153488 + B4A SINE B4 176 234 -58 4 663 351 0 0 0 chr15 10342605 10342644 -93152330 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 663 218 276 0 63 chr15 10342783 10342926 -93152048 + (TA)n Simple_repeat Simple_repeat 1 134 0 4 663 501 275 33 65 chr15 10344395 10344609 -93150365 - RLTR42-int LTR ERVK -4122 1400 1194 4 663 419 280 141 72 chr15 10344651 10344818 -93150156 - MER2 DNA MER2_type -64 281 101 4 663 1359 191 217 157 chr15 10344818 10345268 -93149706 + MT2A LTR ERVL 1 465 -68 4 663 432 0 0 0 chr15 10345268 10345316 -93149658 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 4 663 1359 191 217 157 chr15 10345316 10345368 -93149606 + MT2A LTR ERVL 466 533 0 4 663 419 280 141 72 chr15 10345368 10345462 -93149512 - MER2 DNA MER2_type -245 100 2 4 663 205 315 69 43 chr15 10346526 10346642 -93148332 + MIRb SINE MIR 88 206 -62 4 663 25 31 0 0 chr15 10347053 10347085 -93147889 + AT_rich Low_complexity Low_complexity 1 32 0 4 663 2930 73 3 19 chr15 10347145 10347510 -93147464 - RLTR10D LTR ERVK 0 359 1 4 663 303 262 229 31 chr15 10347632 10347955 -93147019 - Lx8 LINE L1 -1577 6119 5733 4 663 355 131 33 0 chr15 10347952 10348013 -93146961 - Lx5 LINE L1 -313 6737 6675 4 663 583 274 125 43 chr15 10348019 10348116 -93146858 - Lx8 LINE L1 -284 5563 5461 4 663 3861 30 11 0 chr15 10348116 10348553 -93146421 - L1Md_F3 LINE L1 -14 6570 6129 4 663 583 274 125 43 chr15 10348553 10348760 -93146214 - Lx8 LINE L1 -387 5460 5234 4 663 579 248 44 0 chr15 10348934 10349071 -93145903 - B1F SINE Alu 0 149 7 4 663 3709 220 41 24 chr15 10349075 10349945 -93145029 + Lx6 LINE L1 5683 6535 -925 4 663 763 186 156 54 chr15 10349953 10350018 -93144956 + URR1A DNA MER1_type 1 82 -144 4 663 1221 69 131 0 chr15 10350018 10350178 -93144796 - B2_Mm2 SINE B2 -14 181 1 4 663 763 186 156 54 chr15 10350178 10350317 -93144657 + URR1A DNA MER1_type 83 226 0 4 663 3697 213 83 15 chr15 10350324 10351121 -93143853 + Lx6 LINE L1 6585 7435 -25 4 663 237 33 0 0 chr15 10351190 10351220 -93143754 + (T)n Simple_repeat Simple_repeat 1 30 0 4 663 1813 86 51 70 chr15 10351910 10352224 -93142750 + Lx LINE L1 6347 6654 0 4 663 497 88 12 0 chr15 10352539 10352619 -93142355 + (TC)n Simple_repeat Simple_repeat 1 81 0 4 663 238 258 16 16 chr15 10352949 10353012 -93141962 + L1MB4 LINE L1 4711 4773 -1373 4 663 393 86 0 0 chr15 10353016 10353074 -93141900 + (GGAA)n Simple_repeat Simple_repeat 4 61 0 4 663 1018 125 28 0 chr15 10353193 10353337 -93141637 + B1_Mur4 SINE Alu 1 148 -2 4 663 279 128 0 0 chr15 10353347 10353394 -93141580 + Lx9 LINE L1 7595 7641 -3 4 663 350 297 75 99 chr15 10353513 10353792 -93141182 + B4 SINE B4 35 292 0 4 663 927 295 74 98 chr15 10353796 10354541 -93140433 + L1MB4 LINE L1 5412 6131 -52 4 664 221 258 0 29 chr15 10354936 10355004 -93139970 + MIR3 SINE MIR 129 194 -14 4 664 276 168 73 23 chr15 10355209 10355318 -93139656 + B1_Mm SINE Alu 106 320 0 4 664 816 126 123 65 chr15 10355313 10355464 -93139510 - B2_Mm2 SINE B2 -14 181 20 4 664 1281 41 7 0 chr15 10355464 10355609 -93139365 - B1_Mus2 SINE Alu -1 146 1 4 664 816 126 123 65 chr15 10355609 10355627 -93139347 - B2_Mm2 SINE B2 -176 19 2 4 664 235 321 25 13 chr15 10357208 10357287 -93137687 + MER21B LTR ERV1 407 486 -377 4 664 972 117 0 27 chr15 10357291 10357440 -93137534 + B2_Mm2 SINE B2 2 146 -49 4 664 203 61 0 29 chr15 10357444 10357478 -93137496 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 4 664 382 317 134 50 chr15 10357478 10357740 -93137234 + MER21B LTR ERV1 469 752 -111 4 664 656 286 98 25 chr15 10358164 10358316 -93136658 + Lx8 LINE L1 7172 7327 -146 4 664 465 19 0 0 chr15 10358316 10358370 -93136604 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 664 656 286 98 25 chr15 10358370 10358493 -93136481 + Lx8 LINE L1 7328 7466 -7 4 664 980 122 50 44 chr15 10358561 10358741 -93136233 - B2_Mm2 SINE B2 -14 181 1 5 664 483 344 52 63 chr15 10358896 10359166 -93135808 + LTR16A LTR ERVL 1 267 -184 5 664 5157 67 24 35 chr15 10359604 10360249 -93134725 + L1VL2 LINE L1 612 1259 -5375 5 664 1135 44 73 0 chr15 10360249 10360385 -93134589 + B1_Mm SINE Alu 2 147 0 5 664 5157 122 84 21 chr15 10360385 10361120 -93133854 + L1VL2 LINE L1 1260 2125 -1789 5 664 300 186 17 17 chr15 10361280 10361340 -93133634 - PB1D10 SINE Alu -15 102 43 5 664 567 112 0 0 chr15 10362077 10362184 -93132790 + (TAGA)n Simple_repeat Simple_repeat 4 110 0 5 664 342 331 66 17 chr15 10362304 10362485 -93132489 + Lx8 LINE L1 7282 7471 -2 5 664 639 0 0 0 chr15 10362816 10362887 -93132087 + (TATTG)n Simple_repeat Simple_repeat 5 75 0 5 664 186 191 0 0 chr15 10363366 10363413 -93131561 + CT-rich Low_complexity Low_complexity 2 48 0 5 664 235 297 72 28 chr15 10363430 10363623 -93131351 + MTEb LTR MaLR 165 379 0 5 664 483 336 209 11 chr15 10363656 10363933 -93131041 - MLT1E2 LTR MaLR -158 469 138 5 664 367 214 112 0 chr15 10364239 10364337 -93130637 + PB1D7 SINE Alu 1 109 -11 5 664 468 111 0 0 chr15 10364369 10364432 -93130542 - B1_Mus2 SINE Alu -15 132 70 5 664 276 163 0 0 chr15 10364431 10364502 -93130472 + B1_Mm SINE Alu 50 147 0 5 664 791 77 161 0 chr15 10364510 10364640 -93130334 - B2_Mm2 SINE B2 -14 181 31 5 664 1146 76 14 0 chr15 10364661 10364805 -93130169 - B1_Mus2 SINE Alu -1 146 1 5 664 23 33 0 0 chr15 10365242 10365272 -93129702 + AT_rich Low_complexity Low_complexity 1 30 0 5 664 1533 11 0 0 chr15 10365387 10365562 -93129412 + (GA)n Simple_repeat Simple_repeat 1 175 0 5 664 2272 98 3 12 chr15 10365956 10366278 -93128696 + ORR1A2 LTR MaLR 1 319 -8 5 664 311 312 52 0 chr15 10367456 10367552 -93127422 + B1F SINE Alu 29 129 -20 5 664 396 206 37 56 chr15 10368622 10368730 -93126244 + MLT1D LTR MaLR 108 213 -292 5 664 282 56 0 0 chr15 10368820 10368856 -93126118 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 664 763 295 133 0 chr15 10368857 10369098 -93125876 - B4A SINE B4 -18 274 2 5 664 347 293 78 0 chr15 10369140 10369256 -93125718 + Charlie1b DNA MER1_type 393 517 -6 5 664 345 291 72 72 chr15 10369659 10369852 -93125122 + MLT1D LTR MaLR 261 453 -52 5 664 720 186 8 0 chr15 10369876 10370000 -93124974 - RSINE1 SINE B4 -38 127 3 5 664 225 224 0 20 chr15 10370012 10370062 -93124912 + MLT1D LTR MaLR 449 497 -8 5 664 413 267 45 22 chr15 10370068 10370202 -93124772 - MIRb SINE MIR -113 155 19 5 664 380 326 30 22 chr15 10370401 10370536 -93124438 - B3A SINE B2 0 198 63 5 664 342 286 142 76 chr15 10372244 10372532 -93122442 + ORR1D1 LTR MaLR 9 315 -59 5 664 282 222 37 0 chr15 10373250 10373304 -93121670 - B1F SINE Alu -77 72 17 5 664 234 324 94 87 chr15 10373504 10373653 -93121321 - MIRb SINE MIR -89 179 30 5 664 296 270 168 18 chr15 10373969 10374082 -93120892 - MLT1J LTR MaLR -382 130 1 5 664 634 107 241 0 chr15 10375332 10375444 -93119530 - B1_Mus1 SINE Alu -8 140 2 5 664 1336 96 68 0 chr15 10375606 10375783 -93119191 + B2_Mm2 SINE B2 2 190 -5 5 664 1193 82 0 0 chr15 10375786 10375933 -93119041 + B1_Mus2 SINE Alu 1 147 0 5 664 234 0 0 0 chr15 10375933 10375959 -93119015 + (A)n Simple_repeat Simple_repeat 1 26 0 5 664 23 0 0 0 chr15 10377530 10377553 -93117421 + AT_rich Low_complexity Low_complexity 1 23 0 5 664 923 48 168 0 chr15 10377952 10378077 -93116897 - B1_Mus2 SINE Alu 0 147 2 5 664 532 271 35 7 chr15 10378082 10378223 -93116751 - B1F SINE Alu 0 149 5 5 664 265 233 8 34 chr15 10378645 10378716 -93116258 + PB1D10 SINE Alu 41 107 -13 5 664 307 46 0 0 chr15 10379531 10379576 -93115398 - B2_Mm2 SINE B2 -152 46 2 5 664 425 303 61 0 chr15 10379640 10379772 -93115202 - B4A SINE B4 -1 291 152 5 664 26 30 0 0 chr15 10379913 10379946 -93115028 + AT_rich Low_complexity Low_complexity 1 33 0 5 664 1386 87 27 5 chr15 10379955 10380140 -93114834 + B2_Mm2 SINE B2 1 189 -6 5 664 762 336 38 41 chr15 10380794 10381086 -93113888 + B4A SINE B4 2 292 0 5 664 293 155 17 0 chr15 10381086 10381144 -93113830 + (CATA)n Simple_repeat Simple_repeat 3 61 0 5 664 31 26 0 0 chr15 10381144 10381182 -93113792 + AT_rich Low_complexity Low_complexity 1 38 0 5 664 1148 58 65 0 chr15 10381682 10381821 -93113153 + B1_Mus1 SINE Alu 1 148 0 5 664 204 40 0 0 chr15 10381821 10381846 -93113128 + (A)n Simple_repeat Simple_repeat 1 25 0 5 664 25 0 0 0 chr15 10382342 10382367 -93112607 + AT_rich Low_complexity Low_complexity 1 25 0 5 664 255 269 15 15 chr15 10382677 10382745 -93112229 + ID4 SINE ID 14 81 -2 5 664 327 316 158 51 chr15 10383515 10384028 -93110946 + L1MC4 LINE L1 7475 8042 0 5 664 486 92 0 0 chr15 10385109 10385174 -93109800 + B1_Mus2 SINE Alu 2 66 -81 5 664 893 28 0 0 chr15 10385298 10385407 -93109567 - B1_Mus2 SINE Alu -9 138 30 5 664 540 296 137 25 chr15 10385516 10386028 -93108946 - Tigger7 DNA MER2_type -1882 609 3 5 664 3525 110 148 125 chr15 10386142 10386414 -93108560 - L1_Mur1 LINE L1 -964 4922 4609 5 664 686 102 10 0 chr15 10386414 10386512 -93108462 + B1_Mus1 SINE Alu 1 99 -49 5 664 3525 110 148 125 chr15 10386512 10386973 -93108001 - L1_Mur1 LINE L1 -964 4608 4073 5 664 7844 102 72 10 chr15 10386969 10388108 -93106866 + Lx3C LINE L1 5700 6893 -83 5 664 216 0 0 0 chr15 10388108 10388132 -93106842 + (G)n Simple_repeat Simple_repeat 1 24 0 5 664 7844 102 72 10 chr15 10388132 10388193 -93106781 + Lx3C LINE L1 6894 6973 -3 5 664 474 128 0 0 chr15 10388197 10388212 -93106762 + (A)n Simple_repeat Simple_repeat 1 15 0 5 664 1187 97 0 0 chr15 10388212 10388356 -93106618 + B1_Mus2 SINE Alu 4 147 0 5 664 474 128 0 0 chr15 10388356 10388418 -93106556 + (A)n Simple_repeat Simple_repeat 1 62 0 5 664 882 41 16 0 chr15 10388830 10388952 -93106022 - B1_Mus2 SINE Alu -22 125 2 5 664 1339 97 32 0 chr15 10389107 10389293 -93105681 - B2_Mm1t SINE B2 -1 192 1 5 664 702 210 14 0 chr15 10389328 10389471 -93105503 + B1_Mus2 SINE Alu 2 146 -1 5 664 267 276 209 0 chr15 10390142 10390247 -93104727 + RSINE1 SINE B4 4 130 -35 5 664 270 73 0 0 chr15 10390271 10390312 -93104662 + (GTTTG)n Simple_repeat Simple_repeat 2 42 0 5 664 1092 80 0 0 chr15 10390312 10390449 -93104525 - B1_Mus2 SINE Alu -9 138 2 5 664 306 188 157 14 chr15 10391280 10391350 -93103624 - ID4_ SINE ID -3 80 1 5 664 216 362 0 0 chr15 10392576 10392656 -93102318 - MIRb SINE MIR -163 105 26 5 664 336 182 12 38 chr15 10392806 10392886 -93102088 - B1F SINE Alu -1 148 71 5 664 383 276 58 116 chr15 10393780 10393952 -93101022 + RSINE1 SINE B4 4 165 0 5 664 252 0 0 0 chr15 10393961 10393989 -93100985 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 664 364 195 78 0 chr15 10393990 10394067 -93100907 + B1F2 SINE Alu 57 139 -10 5 664 23 0 0 0 chr15 10394077 10394100 -93100874 + AT_rich Low_complexity Low_complexity 1 23 0 5 664 560 288 13 25 chr15 10394103 10394260 -93100714 + RSINE1 SINE B4 2 156 -9 5 664 1530 171 77 15 chr15 10395181 10395519 -93099455 + ORR1D1 LTR MaLR 16 374 0 5 664 201 254 27 27 chr15 10396688 10396761 -93098213 - L3 LINE CR1 -901 3588 3516 5 664 1215 48 0 0 chr15 10396993 10397140 -93097834 + B1_Mus2 SINE Alu 1 147 0 5 664 217 68 22 22 chr15 10397141 10397186 -93097788 + (CAAAAA)n Simple_repeat Simple_repeat 1 45 0 5 664 1244 40 0 0 chr15 10398894 10399042 -93095932 + B1_Mus1 SINE Alu 1 148 0 5 664 206 222 0 0 chr15 10399043 10399097 -93095877 + A-rich Low_complexity Low_complexity 1 54 0 5 664 283 259 46 23 chr15 10399405 10399492 -93095482 + PB1D10 SINE Alu 21 109 -8 5 664 21 100 0 0 chr15 10399941 10400011 -93094963 + GC_rich Low_complexity Low_complexity 1 70 0 5 664 35 24 0 0 chr15 10400130 10400172 -93094802 + GC_rich Low_complexity Low_complexity 1 42 0 5 664 225 82 40 20 chr15 10400249 10400299 -93094675 + (CGG)n Simple_repeat Simple_repeat 1 51 0 5 664 227 105 0 95 chr15 10400833 10400875 -93094099 - MurSatRep1 Unknown Unknown -1876 261 224 5 664 234 279 44 0 chr15 10400936 10401004 -93093970 - PB1D10 SINE Alu -46 71 1 5 664 235 226 0 16 chr15 10400948 10401011 -93093963 - B4A SINE B4 -151 141 80 5 664 1104 84 0 14 chr15 10401151 10401289 -93093685 + B1_Mus1 SINE Alu 1 138 -10 5 664 198 0 0 0 chr15 10401289 10401311 -93093663 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 5 664 308 297 0 26 chr15 10401456 10401532 -93093442 + B1F SINE Alu 10 83 -66 5 664 29 0 0 0 chr15 10401536 10401565 -93093409 + AT_rich Low_complexity Low_complexity 1 29 0 5 664 277 212 15 0 chr15 10401596 10401662 -93093312 - U5 snRNA snRNA -47 69 3 5 664 461 62 15 0 chr15 10401669 10401734 -93093240 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 5 664 846 193 102 29 chr15 10401734 10402087 -93092887 - RMER10A LTR ERVL -29 413 2 5 664 245 281 57 94 chr15 10402771 10402877 -93092097 - B1F SINE Alu -38 111 10 5 664 1166 68 0 0 chr15 10403014 10403161 -93091813 + B1_Mus2 SINE Alu 1 147 0 5 664 217 259 0 0 chr15 10403161 10403215 -93091759 + A-rich Low_complexity Low_complexity 1 54 0 5 664 32 26 0 0 chr15 10403296 10403335 -93091639 + AT_rich Low_complexity Low_complexity 1 39 0 5 664 1125 88 0 0 chr15 10403436 10403583 -93091391 - B1_Mus2 SINE Alu 0 147 1 6 664 1053 83 28 0 chr15 10403727 10403871 -93091103 - B1_Mus1 SINE Alu 0 148 1 6 664 325 143 18 0 chr15 10403909 10403965 -93091009 - B3 SINE B2 -159 57 1 6 664 572 250 161 11 chr15 10403995 10404169 -93090805 + MTD LTR MaLR 19 218 -201 6 664 257 268 164 8 chr15 10404181 10404309 -93090665 + MTD LTR MaLR 272 419 0 6 664 500 168 10 0 chr15 10404749 10404850 -93090124 + (TA)n Simple_repeat Simple_repeat 2 103 0 6 664 3113 133 186 5 chr15 10405045 10405685 -93089289 - RMER6A LTR ERVK 0 756 1 6 664 346 208 56 103 chr15 10406785 10406892 -93088082 + PB1D9 SINE Alu 17 118 -2 6 664 528 316 32 26 chr15 10407152 10407308 -93087666 - RSINE1 SINE B4 0 165 9 6 664 465 280 27 27 chr15 10407310 10407457 -93087517 - B4 SINE B4 -63 229 83 6 664 201 229 0 0 chr15 10407527 10407575 -93087399 + CT-rich Low_complexity Low_complexity 3 50 0 6 664 1123 88 7 0 chr15 10407575 10407722 -93087252 - B1_Mus1 SINE Alu 0 148 1 6 664 1569 32 32 0 chr15 10409529 10409716 -93085258 - B2_Mm1a SINE B2 0 193 1 6 664 901 56 8 0 chr15 10410038 10410163 -93084811 - B2_Mm2 SINE B2 -69 126 1 6 664 31 26 0 0 chr15 10410188 10410226 -93084748 + AT_rich Low_complexity Low_complexity 1 38 0 6 664 661 212 72 7 chr15 10410323 10410461 -93084513 - B1_Mur3 SINE Alu -1 148 2 6 664 900 62 90 7 chr15 10410501 10410646 -93084328 + B2_Mm2 SINE B2 27 183 -12 6 664 189 0 0 0 chr15 10410646 10410667 -93084307 + (CAGA)n Simple_repeat Simple_repeat 2 22 0 6 664 241 303 78 11 chr15 10411778 10411868 -93083106 - PB1D10 SINE Alu -21 96 1 6 664 412 295 7 7 chr15 10411880 10412020 -93082954 - ID_B1 SINE B4 -3 221 82 6 664 462 186 138 41 chr15 10412022 10412145 -93082829 - B1F2 SINE Alu -11 138 4 6 664 474 224 32 57 chr15 10412434 10412557 -93082417 + PB1D9 SINE Alu 1 120 0 6 664 22 0 0 0 chr15 10412557 10412579 -93082395 + AT_rich Low_complexity Low_complexity 1 22 0 6 664 867 256 61 4 chr15 10412689 10412917 -93082057 - B4 SINE B4 0 292 52 6 664 351 176 58 24 chr15 10413254 10413360 -93081614 + PB1 SINE Alu 13 120 -194 6 664 1094 101 0 0 chr15 10413515 10413663 -93081311 - B1_Mus1 SINE Alu 0 148 1 6 664 531 0 0 0 chr15 10413887 10413946 -93081028 + (TC)n Simple_repeat Simple_repeat 2 60 0 6 664 807 59 195 0 chr15 10413947 10414065 -93080909 - B1_Mus2 SINE Alu -6 141 1 6 664 225 83 0 0 chr15 10415073 10415109 -93079865 + (CATA)n Simple_repeat Simple_repeat 2 37 0 6 664 687 179 14 82 chr15 10416856 10417002 -93077972 - B1_Mur2 SINE Alu -12 137 2 6 664 1058 83 112 0 chr15 10417158 10417327 -93077647 - B2_Mm2 SINE B2 -7 188 1 6 664 837 235 20 15 chr15 10417332 10417535 -93077439 - B3 SINE B2 -4 212 9 6 664 180 77 0 0 chr15 10417864 10417890 -93077084 + (CTA)n Simple_repeat Simple_repeat 1 26 0 6 664 929 253 23 14 chr15 10417982 10418202 -93076772 - ID_B1 SINE B4 -1 223 2 6 664 423 183 24 12 chr15 10418233 10418316 -93076658 + Lx8 LINE L1 7155 7238 -235 6 664 1108 230 91 40 chr15 10418565 10418918 -93076056 - MTEa LTR MaLR -8 371 1 6 664 421 266 28 0 chr15 10419189 10419298 -93075676 - PB1D10 SINE Alu 0 117 6 6 664 212 284 15 0 chr15 10419296 10419363 -93075611 - B1F2 SINE Alu -55 94 27 6 664 344 297 26 43 chr15 10419420 10419536 -93075438 + RSINE1 SINE B4 45 158 -7 6 664 533 177 26 17 chr15 10421780 10421895 -93073079 + B3A SINE B2 3 118 -80 6 664 321 26 0 0 chr15 10421922 10421960 -93073014 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 664 361 346 37 16 chr15 10422228 10422416 -93072558 - B4A SINE B4 -94 198 7 6 664 1147 42 14 14 chr15 10423115 10423261 -93071713 - B1_Mm SINE Alu 0 147 2 6 664 1200 48 0 0 chr15 10423494 10423640 -93071334 + B1_Mus2 SINE Alu 2 147 0 6 664 186 71 0 0 chr15 10423641 10423669 -93071305 + (CAAAAA)n Simple_repeat Simple_repeat 4 31 0 6 664 369 0 0 0 chr15 10423680 10423721 -93071253 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 664 624 228 101 6 chr15 10423721 10423889 -93071085 - B3 SINE B2 -29 187 4 6 664 261 0 0 0 chr15 10423977 10424006 -93070968 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 664 792 137 67 22 chr15 10424013 10424147 -93070827 - B1_Mm SINE Alu -6 141 2 6 664 252 0 0 0 chr15 10424241 10424269 -93070705 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 6 664 961 97 0 0 chr15 10424269 10424403 -93070571 - B1_Mus1 SINE Alu -12 136 3 6 664 214 254 0 33 chr15 10424481 10424542 -93070432 + MER5A DNA MER1_type 125 183 -6 6 664 707 9 62 0 chr15 10424598 10424710 -93070264 + (TC)n Simple_repeat Simple_repeat 1 119 0 6 664 826 150 0 8 chr15 10424808 10424942 -93070032 - B1_Mur4 SINE Alu 0 150 18 6 664 214 258 15 15 chr15 10425772 10425839 -93069135 + RSINE1 SINE B4 11 77 -88 6 664 4064 134 83 51 chr15 10426270 10427067 -93067907 - RLTR13B2 LTR ERVK 0 822 1 6 664 570 314 126 59 chr15 10427149 10427671 -93067303 + LTR82A LTR ERVL 251 807 -65 6 664 412 259 0 0 chr15 10427725 10427810 -93067164 + 5S rRNA rRNA 1 85 -36 6 664 314 284 0 40 chr15 10427810 10427824 -93067150 + AmnSINE1 SINE SINE 1 95 -480 6 664 2387 63 119 11 chr15 10428064 10428416 -93066558 - RLTR10 LTR ERVK 0 390 1 6 664 370 274 66 104 chr15 10429012 10429195 -93065779 - B4 SINE B4 -115 177 2 6 664 180 0 0 0 chr15 10429775 10429795 -93065179 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 6 664 214 324 55 37 chr15 10431090 10431199 -93063775 - MIRb SINE MIR -44 224 114 6 664 264 276 92 0 chr15 10431260 10431347 -93063627 - PB1 SINE Alu -25 102 8 6 664 354 23 0 0 chr15 10432651 10432694 -93062280 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 664 273 260 40 40 chr15 10433388 10433488 -93061486 - MIR SINE MIR -35 227 128 6 664 23 0 0 0 chr15 10433638 10433661 -93061313 + AT_rich Low_complexity Low_complexity 1 23 0 6 664 786 112 5 43 chr15 10434361 10434547 -93060427 + (CTA)n Simple_repeat Simple_repeat 2 180 0 6 664 183 388 33 37 chr15 10434832 10435073 -93059901 + L2 LINE L2 2365 2604 -815 6 664 511 245 61 34 chr15 10436818 10437018 -93057956 - Lx8 LINE L1 -584 7112 6896 6 664 1062 95 0 26 chr15 10437567 10437580 -93057394 - B1_Mus1 SINE Alu 0 148 137 6 664 231 61 0 0 chr15 10437580 10437613 -93057361 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 6 664 1062 95 0 26 chr15 10437613 10437751 -93057223 - B1_Mus1 SINE Alu -12 136 1 6 664 1233 27 0 13 chr15 10438460 10438609 -93056365 + B1_Mus2 SINE Alu 1 147 0 6 664 549 317 171 14 chr15 10439592 10440018 -93054956 + L1MEc LINE L1 68 560 -5840 6 664 676 179 16 31 chr15 10440164 10440291 -93054683 + B1_Mus2 SINE Alu 23 147 0 6 664 323 255 26 97 chr15 10440371 10440484 -93054490 + PB1D10 SINE Alu 6 110 -7 6 664 258 81 0 0 chr15 10440583 10440620 -93054354 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 664 1020 316 74 58 chr15 10440814 10441474 -93053500 + L1MEc LINE L1 4066 4743 -1576 6 664 1131 75 14 0 chr15 10441474 10441620 -93053354 + B1_Mus1 SINE Alu 1 148 0 6 664 1020 289 160 35 chr15 10441620 10441891 -93053083 + L1MEc LINE L1 4744 5015 -1304 6 664 704 257 36 51 chr15 10442306 10442638 -93052336 - RLTR15 LTR ERVK -32 327 1 6 664 288 305 73 0 chr15 10442685 10442849 -93052125 - L1M2 LINE L1 -3004 3139 2964 6 664 1277 76 17 11 chr15 10442900 10443074 -93051900 - B2_Mm2 SINE B2 -19 176 2 6 664 1159 51 0 0 chr15 10443245 10443383 -93051591 - B1_Mus1 SINE Alu -10 138 1 6 664 560 173 131 23 chr15 10443919 10444049 -93050925 - B1_Mur2 SINE Alu -5 144 1 6 664 1214 61 0 0 chr15 10444063 10444210 -93050764 - B1_Mus1 SINE Alu 0 148 2 6 664 309 225 170 9 chr15 10444294 10444406 -93050568 + MT2A LTR ERVL 3 132 -401 6 664 713 202 79 39 chr15 10444452 10444624 -93050350 + MT2A LTR ERVL 316 543 -58 6 664 198 0 0 0 chr15 10444624 10444646 -93050328 + (TG)n Simple_repeat Simple_repeat 1 22 0 6 664 279 0 0 0 chr15 10444646 10444676 -93050298 + (GA)n Simple_repeat Simple_repeat 1 31 0 6 664 713 190 87 39 chr15 10444676 10444741 -93050233 + MT2A LTR ERVL 462 532 -1 6 664 198 277 14 58 chr15 10445175 10445244 -93049730 - MIR SINE MIR -71 191 126 6 664 1014 146 0 0 chr15 10445326 10445497 -93049477 + (TTTTC)n Simple_repeat Simple_repeat 3 173 0 6 664 1337 96 0 16 chr15 10445506 10445696 -93049278 - B2_Mm2 SINE B2 -8 187 1 6 664 390 42 0 0 chr15 10445817 10445865 -93049109 + (TA)n Simple_repeat Simple_repeat 1 48 0 6 664 207 0 0 0 chr15 10445865 10445887 -93049087 + (GA)n Simple_repeat Simple_repeat 2 24 0 6 664 546 234 46 66 chr15 10446643 10446794 -93048180 - B1_Mur1 SINE Alu 0 149 2 6 664 367 316 103 38 chr15 10446839 10446881 -93048093 - Lx7 LINE L1 0 5847 5801 6 664 1087 175 30 84 chr15 10446881 10447118 -93047856 - URR1B DNA MER1_type -1 224 1 6 664 430 301 75 37 chr15 10447118 10447486 -93047488 - Lx7 LINE L1 -47 5800 5445 6 664 945 132 0 27 chr15 10447486 10447634 -93047340 - B1_Mus1 SINE Alu -2 146 3 6 664 415 325 131 24 chr15 10447634 10447665 -93047309 - Lx7 LINE L1 -847 5444 5410 6 664 554 306 126 53 chr15 10447966 10448691 -93046283 - Lx7 LINE L1 -863 5434 4647 6 664 3444 177 103 80 chr15 10448872 10449748 -93045226 - RMER19B LTR ERVK -6 896 1 6 664 586 280 72 32 chr15 10449879 10450230 -93044744 - Lx8 LINE L1 -215 7429 6929 6 664 617 265 93 68 chr15 10450338 10450545 -93044429 - Lx7 LINE L1 -1686 4454 4246 6 664 324 0 0 0 chr15 10450545 10450581 -93044393 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 664 617 265 93 68 chr15 10450581 10450847 -93044127 - Lx7 LINE L1 -1895 4245 3969 6 664 257 229 205 0 chr15 10450990 10451073 -93043901 - L2a LINE L2 -15 3411 3312 6 664 1067 50 0 0 chr15 10451476 10451616 -93043358 - B1_Mus1 SINE Alu 0 148 9 6 664 1238 232 108 6 chr15 10451863 10452188 -93042786 + MTC LTR MaLR 62 419 -2 7 664 1200 75 0 0 chr15 10452300 10452447 -93042527 + B1_Mus2 SINE Alu 1 147 0 7 664 476 132 12 0 chr15 10452455 10452538 -93042436 + (GAGAA)n Simple_repeat Simple_repeat 1 84 0 7 664 1963 196 63 20 chr15 10452609 10453114 -93041860 - RLTR11A2 LTR ERVK 0 527 1 7 664 477 270 0 31 chr15 10453895 10454025 -93040949 + B1F SINE Alu 12 137 -12 7 664 21 0 0 0 chr15 10454049 10454070 -93040904 + GC_rich Low_complexity Low_complexity 1 21 0 7 664 1074 184 92 0 chr15 10454196 10454402 -93040572 - Lx5 LINE L1 -1019 6031 5807 7 664 677 186 41 0 chr15 10454437 10454582 -93040392 + Lx5 LINE L1 6897 7047 -3 7 664 328 252 210 65 chr15 10454603 10455032 -93039942 - L1MD LINE L1 -2058 4088 3598 7 664 456 19 0 0 chr15 10455529 10455582 -93039392 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 7 664 288 178 15 0 chr15 10455582 10455656 -93039318 - Lx7 LINE L1 -21 7675 7610 7 664 240 237 30 70 chr15 10455769 10455869 -93039105 - Lx7 LINE L1 -335 7361 7266 7 664 624 298 13 0 chr15 10456769 10456920 -93038054 - RSINE1 SINE B4 -10 155 3 7 664 386 241 19 0 chr15 10456934 10457041 -93037933 - L1MD LINE L1 -2552 3594 3486 7 664 23 0 0 0 chr15 10457131 10457154 -93037820 + AT_rich Low_complexity Low_complexity 1 23 0 7 664 972 296 32 41 chr15 10457427 10457769 -93037205 + MTEa LTR MaLR 40 378 -1 7 664 420 249 164 13 chr15 10457879 10458085 -93036889 - L1MA4 LINE L1 -375 5925 5677 7 664 271 253 53 0 chr15 10458417 10458512 -93036462 - L1_Mur3 LINE L1 -450 5430 5331 7 664 706 268 113 46 chr15 10458616 10459030 -93035944 - L1MA4 LINE L1 -832 5311 4870 7 664 24 0 0 0 chr15 10459035 10459059 -93035915 + AT_rich Low_complexity Low_complexity 1 24 0 7 664 672 307 6 12 chr15 10459068 10459233 -93035741 + RSINE1 SINE B4 2 165 0 7 664 241 254 82 11 chr15 10460673 10460762 -93034212 + MIR SINE MIR 25 118 -144 7 664 189 388 0 40 chr15 10461007 10461133 -93033841 + MIR SINE MIR 115 235 -27 7 664 291 339 35 46 chr15 10461390 10461563 -93033411 + MIR SINE MIR 31 201 -61 7 664 21 0 0 0 chr15 10461586 10461607 -93033367 + AT_rich Low_complexity Low_complexity 1 21 0 7 664 1226 95 5 36 chr15 10461773 10461969 -93033005 + URR1A DNA MER1_type 37 226 0 7 664 940 171 66 0 chr15 10462252 10462275 -93032699 - B2_Mm1t SINE B2 0 193 161 7 664 186 43 0 0 chr15 10462275 10462298 -93032676 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 664 1115 96 6 0 chr15 10462298 10462455 -93032519 - B2_Mm2 SINE B2 -37 158 1 7 664 30 0 0 0 chr15 10462635 10462665 -93032309 + AT_rich Low_complexity Low_complexity 1 30 0 7 664 528 16 0 0 chr15 10462672 10462733 -93032241 + (TC)n Simple_repeat Simple_repeat 2 62 0 7 664 242 322 55 68 chr15 10462733 10462896 -93032078 - RSINE1 SINE B4 -1 164 4 7 664 261 252 49 25 chr15 10463223 10463386 -93031588 + (CCAA)n Simple_repeat Simple_repeat 3 169 0 7 664 749 90 0 9 chr15 10464311 10464423 -93030551 + (GAAA)n Simple_repeat Simple_repeat 2 112 0 7 664 345 250 61 91 chr15 10464721 10464760 -93030214 + ID SINE ID 45 79 -145 7 664 476 286 0 25 chr15 10464760 10464882 -93030092 + PB1D7 SINE Alu 2 120 0 7 664 227 331 71 7 chr15 10465271 10465426 -93029548 + MIR SINE MIR 21 185 -77 7 664 180 0 0 0 chr15 10465426 10465446 -93029528 + (T)n Simple_repeat Simple_repeat 1 20 0 7 664 517 28 0 0 chr15 10465446 10465517 -93029457 - B1_Mur4 SINE Alu 0 150 80 7 664 905 60 8 0 chr15 10466297 10466430 -93028544 + (TG)n Simple_repeat Simple_repeat 2 135 0 7 664 974 134 0 6 chr15 10466489 10466654 -93028320 + (TTTC)n Simple_repeat Simple_repeat 3 166 0 7 664 860 94 8 0 chr15 10466656 10466784 -93028190 + (TCC)n Simple_repeat Simple_repeat 1 129 0 7 664 1123 83 14 0 chr15 10466791 10466936 -93028038 - B1_Mus1 SINE Alu 0 148 2 7 664 339 149 0 26 chr15 10466936 10467004 -93027970 - URR1A DNA MER1_type -83 143 77 7 664 696 189 11 16 chr15 10468663 10468812 -93026162 - B2_Mm2 SINE B2 -38 160 1 7 664 238 298 42 11 chr15 10471097 10471192 -93023782 - PB1D10 SINE Alu -19 98 1 7 664 1647 161 45 96 chr15 10471215 10471613 -93023361 + ORR1C1 LTR MaLR 1 378 0 7 664 220 261 0 0 chr15 10471693 10471739 -93023235 + CT-rich Low_complexity Low_complexity 3 48 0 7 664 466 274 0 9 chr15 10471810 10471917 -93023057 + PB1D10 SINE Alu 4 109 -8 7 664 221 206 127 0 chr15 10472413 10472476 -93022498 + PB1D9 SINE Alu 1 71 -49 7 664 302 216 103 51 chr15 10472487 10472604 -93022370 - ID_B1 SINE B4 0 224 102 7 664 249 257 48 103 chr15 10472492 10472618 -93022356 - PB1 SINE Alu -2 125 7 7 664 482 257 0 0 chr15 10472676 10472781 -93022193 + ID_B1 SINE B4 115 219 -5 7 664 7737 39 10 1 chr15 10472968 10473891 -93021083 - L1Md_F2 LINE L1 -3 6579 5649 7 664 387 0 0 0 chr15 10474586 10474629 -93020345 + (TC)n Simple_repeat Simple_repeat 1 43 0 7 664 618 14 0 0 chr15 10474629 10474699 -93020275 + (CA)n Simple_repeat Simple_repeat 1 71 0 7 664 534 185 69 92 chr15 10476434 10476565 -93018409 - B1_Mur4 SINE Alu -17 133 6 7 664 366 221 26 0 chr15 10477602 10477679 -93017295 - PB1D10 SINE Alu -9 108 30 7 664 340 296 39 85 chr15 10477797 10477887 -93017087 - L1MC5 LINE L1 -769 7192 7107 7 664 438 272 38 81 chr15 10477887 10478047 -93016927 + RSINE1 SINE B4 1 153 -12 7 664 340 296 39 85 chr15 10478047 10478237 -93016737 - L1MC5 LINE L1 -855 7106 6925 7 664 760 211 0 0 chr15 10478705 10478838 -93016136 + B1_Mur2 SINE Alu 5 137 -12 7 664 444 37 0 0 chr15 10478838 10478892 -93016082 + (GA)n Simple_repeat Simple_repeat 2 55 0 7 664 1166 265 61 26 chr15 10479822 10480213 -93014761 + MTD LTR MaLR 1 405 -14 7 664 189 260 0 20 chr15 10481740 10481791 -93013183 + MIR3 SINE MIR 125 174 -34 7 664 1862 131 19 22 chr15 10481813 10482133 -93012841 + Lx LINE L1 6335 6653 -1 7 664 1436 63 25 31 chr15 10482682 10482878 -93012096 + B2_Mm2 SINE B2 1 195 0 7 664 224 236 167 0 chr15 10482928 10483000 -93011974 + PB1D10 SINE Alu 21 104 -13 7 664 219 44 67 0 chr15 10483000 10483045 -93011929 + (CAA)n Simple_repeat Simple_repeat 1 48 0 7 664 1731 287 32 26 chr15 10483409 10484025 -93010949 - Lx7 LINE L1 -1488 6208 5589 7 664 430 270 113 13 chr15 10484024 10484174 -93010800 + Lx8 LINE L1 6183 6347 -1126 7 664 1647 180 34 25 chr15 10484174 10484527 -93010447 + ORR1D1 LTR MaLR 15 370 -4 7 664 930 289 80 6 chr15 10484529 10484856 -93010118 + Lx8 LINE L1 6948 7298 -175 7 664 225 0 0 0 chr15 10485571 10485596 -93009378 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 7 665 760 219 85 25 chr15 10485824 10486025 -93008949 - B3 SINE B2 0 216 4 7 665 279 237 23 23 chr15 10486094 10486182 -93008792 + MER3 DNA MER1_type 6 113 -96 7 665 385 261 285 0 chr15 10486410 10486575 -93008399 + MER20 DNA MER1_type 5 216 -3 7 665 560 256 7 42 chr15 10486734 10486877 -93008097 + B3A SINE B2 16 153 -45 7 665 387 311 24 16 chr15 10491385 10491509 -93003465 + B1F1 SINE Alu 25 149 0 7 665 465 286 30 117 chr15 10491723 10491953 -93003021 + MTD LTR MaLR 5 214 -205 7 665 1558 177 30 58 chr15 10491948 10492278 -93002696 - ORR1B2 LTR MaLR -46 321 1 7 665 280 219 9 127 chr15 10492455 10492525 -93002449 - MTEb LTR MaLR 0 379 321 7 665 6461 72 11 2 chr15 10492525 10493377 -93001597 - L1_Mus3 LINE L1 -2 6636 5778 7 665 280 219 9 127 chr15 10493377 10493416 -93001558 - MTEb LTR MaLR -59 320 283 7 665 235 373 51 29 chr15 10493545 10493683 -93001291 - MTEb LTR MaLR -168 191 51 7 665 950 126 7 7 chr15 10494009 10494161 -93000813 - RLTR25A LTR ERVK 0 1103 952 7 665 2175 151 62 13 chr15 10494156 10494620 -93000354 - RLTR25A LTR ERVK -534 569 1 7 665 213 409 0 8 chr15 10494643 10494776 -93000198 - L2a LINE L2 -194 3232 3101 7 665 1188 238 48 40 chr15 10494808 10495162 -92999812 - ORR1E LTR MaLR -2 357 1 7 665 383 303 71 13 chr15 10495691 10495845 -92999129 + RSINE1 SINE B4 3 165 0 7 665 2071 201 43 171 chr15 10497117 10497818 -92997156 + RMER19C LTR ERVK 1 611 0 7 665 195 42 0 0 chr15 10498114 10498138 -92996836 + (TTATA)n Simple_repeat Simple_repeat 2 25 0 7 665 242 262 24 48 chr15 10500132 10500216 -92994758 + MamGypLTR2 LTR Gypsy 665 746 -443 1 665 658 258 0 0 chr15 10501064 10501196 -92993778 - ID_B1 SINE B4 -3 221 90 2 665 423 0 0 0 chr15 10501550 10501597 -92993377 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 665 423 83 181 0 chr15 10502946 10503018 -92991956 - MTC LTR MaLR -307 114 30 4 665 1174 42 0 27 chr15 10503018 10503165 -92991809 + B1_Mus2 SINE Alu 5 147 0 5 665 315 71 0 0 chr15 10503165 10503207 -92991767 + (A)n Simple_repeat Simple_repeat 1 42 0 6 665 1649 198 22 22 chr15 10503373 10503693 -92991281 + MTC LTR MaLR 100 419 -2 7 665 376 271 36 45 chr15 10503778 10503890 -92991084 - PB1D10 SINE Alu -5 112 2 8 665 271 296 33 100 chr15 10503890 10503920 -92991054 - ID SINE ID -138 86 65 9 665 1229 41 0 13 chr15 10506136 10506285 -92988689 + B1_Mus2 SINE Alu 1 147 0 1 665 43 76 0 0 chr15 10506296 10506388 -92988586 + AT_rich Low_complexity Low_complexity 1 92 0 1 665 3319 272 87 37 chr15 10506388 10507607 -92987367 + Lx8 LINE L1 6191 7470 -3 1 665 302 156 0 15 chr15 10507640 10507705 -92987269 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 1 665 284 136 0 0 chr15 10507731 10507775 -92987199 - B3 SINE B2 -172 44 1 1 665 24 0 0 0 chr15 10508324 10508348 -92986626 + GC_rich Low_complexity Low_complexity 1 24 0 1 665 247 292 116 8 chr15 10509040 10509161 -92985813 + Charlie10b DNA MER1_type 35 168 -74 1 665 889 148 116 23 chr15 10512272 10512445 -92982529 - B2_Mm2 SINE B2 -6 189 1 1 665 269 242 0 61 chr15 10512646 10512712 -92982262 - PB1D10 SINE Alu 0 117 56 1 665 23 33 0 0 chr15 10513958 10513988 -92980986 + AT_rich Low_complexity Low_complexity 1 30 0 1 665 246 62 0 0 chr15 10514626 10514658 -92980316 + (TTA)n Simple_repeat Simple_repeat 2 33 0 2 665 458 283 118 27 chr15 10514694 10515030 -92979944 - L1M5 LINE L1 -1955 5830 5471 2 665 565 243 62 22 chr15 10515640 10515806 -92979168 - B3A SINE B2 -9 186 9 2 665 238 320 39 29 chr15 10516104 10516207 -92978767 - PB1D10 SINE Alu -13 104 1 2 665 768 227 38 29 chr15 10516380 10516589 -92978385 + B3 SINE B2 3 213 -3 2 665 1417 76 16 5 chr15 10516741 10516927 -92978047 + B2_Mm2 SINE B2 2 189 -6 2 665 238 243 26 51 chr15 10516989 10517067 -92977907 - RSINE1 SINE B4 0 165 90 2 665 254 243 127 14 chr15 10517137 10517208 -92977766 - RSINE1 SINE B4 -84 81 3 2 665 1026 138 0 0 chr15 10518424 10518785 -92976189 + (TG)n Simple_repeat Simple_repeat 1 361 0 2 665 246 303 15 0 chr15 10518799 10518865 -92976109 - ID4_ SINE ID -13 70 4 2 665 1139 82 0 0 chr15 10519775 10519922 -92975052 + B1_Mus2 SINE Alu 1 147 0 2 665 297 0 0 0 chr15 10519922 10519955 -92975019 + (A)n Simple_repeat Simple_repeat 1 33 0 3 665 204 370 0 29 chr15 10520946 10521116 -92973858 + (CACTC)n Simple_repeat Simple_repeat 5 169 0 3 665 773 143 17 0 chr15 10521453 10521685 -92973289 + (CA)n Simple_repeat Simple_repeat 1 236 0 3 665 587 171 102 8 chr15 10522331 10522449 -92972525 - B1_Mur3 SINE Alu -20 129 1 3 665 269 239 80 0 chr15 10522352 10522465 -92972509 - ORR1B1-int LTR MaLR -756 753 632 3 665 458 209 12 0 chr15 10523189 10523275 -92971699 + B3A SINE B2 1 87 -111 3 665 309 316 36 36 chr15 10523275 10523327 -92971647 + RSINE1 SINE B4 2 139 -26 3 665 709 188 127 30 chr15 10523386 10523583 -92971391 + B3 SINE B2 1 216 0 3 665 621 195 45 163 chr15 10524218 10524463 -92970511 + MTEb LTR MaLR 164 379 0 3 665 243 380 0 0 chr15 10525283 10525354 -92969620 - ID4_ SINE ID -10 73 3 3 665 180 0 0 0 chr15 10525490 10525510 -92969464 + (C)n Simple_repeat Simple_repeat 1 20 0 4 665 267 274 133 62 chr15 10526333 10526440 -92968534 - MIR SINE MIR -29 239 111 4 665 2456 121 17 43 chr15 10526440 10526854 -92968120 + RLTR9D LTR ERVK 1 403 0 4 665 267 263 116 68 chr15 10526854 10526925 -92968049 - MIR SINE MIR -152 110 35 4 665 192 291 0 18 chr15 10527566 10527622 -92967352 + L2a LINE L2 3117 3171 -255 4 665 246 333 75 0 chr15 10527673 10527766 -92967208 + MIRm SINE MIR 157 256 -20 4 665 402 21 0 0 chr15 10529582 10529629 -92965345 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 4 665 764 271 113 25 chr15 10529893 10530279 -92964695 - Lx7 LINE L1 -1792 5904 5481 4 665 193 294 178 47 chr15 10530942 10531049 -92963925 + L2a LINE L2 3038 3158 -268 4 665 348 270 195 38 chr15 10531049 10531234 -92963740 + ID_B1 SINE B4 2 215 -9 4 665 522 31 0 0 chr15 10531375 10531439 -92963535 + (CA)n Simple_repeat Simple_repeat 2 65 0 4 665 317 268 157 26 chr15 10531726 10531841 -92963133 - MER20 DNA MER1_type -82 137 8 5 665 462 65 0 0 chr15 10532123 10532185 -92962789 + (GGA)n Simple_repeat Simple_repeat 3 64 0 5 665 502 271 36 29 chr15 10532321 10532458 -92962516 - MamRep1161 DNA TcMar -818 139 2 5 665 186 118 0 0 chr15 10533027 10533061 -92961913 + (CAGA)n Simple_repeat Simple_repeat 4 37 0 5 665 22 57 0 19 chr15 10533375 10533409 -92961565 + AT_rich Low_complexity Low_complexity 1 34 0 5 665 1512 53 0 31 chr15 10533409 10533603 -92961371 - B2_Mm2 SINE B2 -6 189 2 5 665 22 57 0 19 chr15 10533603 10533622 -92961352 + AT_rich Low_complexity Low_complexity 1 19 0 5 665 426 323 7 29 chr15 10534002 10534025 -92960949 - ID_B1 SINE B4 -8 216 84 5 665 596 214 26 9 chr15 10534025 10534138 -92960836 - B1_Mur2 SINE Alu -32 117 3 5 665 1392 71 11 0 chr15 10534331 10534513 -92960461 - B2_Mm1t SINE B2 -9 184 1 5 665 219 203 62 0 chr15 10535567 10535631 -92959343 - PB1D7 SINE Alu -9 111 44 6 665 217 87 0 80 chr15 10535661 10535711 -92959263 + T-rich Low_complexity Low_complexity 5 50 0 6 665 395 236 66 0 chr15 10536177 10536283 -92958691 + B1F2 SINE Alu 2 114 -35 6 665 844 243 61 108 chr15 10537275 10537552 -92957422 + B4 SINE B4 28 291 -1 6 665 243 0 0 0 chr15 10537568 10537595 -92957379 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 665 293 296 45 18 chr15 10538066 10538176 -92956798 - MARNA DNA Mariner -75 511 399 6 665 197 200 0 0 chr15 10538750 10538790 -92956184 + MER5B DNA MER1_type 11 50 -128 6 665 1030 274 95 52 chr15 10538821 10539167 -92955807 - MTE2a LTR MaLR -18 361 1 6 665 275 213 13 0 chr15 10539174 10539249 -92955725 + CT-rich Low_complexity Low_complexity 1 76 0 6 665 261 163 0 0 chr15 10539605 10539654 -92955320 + (TTA)n Simple_repeat Simple_repeat 1 49 0 6 665 618 51 0 0 chr15 10541663 10541741 -92953233 + (CA)n Simple_repeat Simple_repeat 2 79 0 7 665 473 305 146 71 chr15 10542570 10542948 -92952026 + LTR33 LTR ERVL 24 429 -86 7 665 2751 58 41 16 chr15 10542978 10543345 -92951629 - L1_Mus2 LINE L1 0 6566 6191 7 665 3171 101 35 13 chr15 10543345 10543806 -92951168 - L1_Mm LINE L1 -917 4966 4496 7 665 439 261 72 7 chr15 10543955 10544094 -92950880 + MTD LTR MaLR 216 363 -56 7 665 486 79 0 0 chr15 10544332 10544408 -92950566 + (TC)n Simple_repeat Simple_repeat 1 76 0 7 665 459 0 0 0 chr15 10544408 10544459 -92950515 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 665 397 259 102 58 chr15 10544710 10544935 -92950039 + L1MA4 LINE L1 5670 5904 -396 7 665 267 263 106 37 chr15 10545521 10545665 -92949309 + MIR SINE MIR 63 200 -62 7 665 1201 129 43 0 chr15 10546270 10546456 -92948518 + B2_Mm2 SINE B2 2 195 0 7 665 247 276 184 0 chr15 10546667 10546743 -92948231 - L2a LINE L2 -35 3391 3302 8 665 459 0 0 0 chr15 10546779 10546830 -92948144 + (TC)n Simple_repeat Simple_repeat 1 51 0 8 665 287 294 11 0 chr15 10547073 10547165 -92947809 - L1MB7 LINE L1 -15 6169 6077 8 665 373 284 131 34 chr15 10547348 10547523 -92947451 - ORR1E LTR MaLR -167 192 1 8 665 284 299 93 69 chr15 10547557 10547773 -92947201 - L1MB7 LINE L1 -130 6044 5824 8 665 21 36 0 0 chr15 10548124 10548152 -92946822 + AT_rich Low_complexity Low_complexity 1 28 0 8 665 524 301 7 35 chr15 10548155 10548296 -92946678 - B3A SINE B2 -5 193 57 8 665 952 208 42 0 chr15 10548679 10548871 -92946103 + B3 SINE B2 8 207 -9 8 665 862 123 6 6 chr15 10548875 10549038 -92945936 + (GGAA)n Simple_repeat Simple_repeat 3 165 0 8 665 238 333 0 0 chr15 10549388 10549481 -92945493 + (CCCCAG)n Simple_repeat Simple_repeat 4 96 0 8 665 423 266 28 0 chr15 10550627 10550736 -92944238 - PB1D7 SINE Alu -5 115 4 8 665 268 300 94 8 chr15 10550994 10551148 -92943826 + L2b LINE L2 2881 3043 -376 9 665 396 0 0 0 chr15 10552222 10552266 -92942708 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 665 626 288 84 40 chr15 10552303 10552553 -92942421 - B4 SINE B4 -30 262 2 9 665 239 176 0 0 chr15 10553145 10553196 -92941778 + tRNA-Ala-GCA tRNA tRNA 2 52 -23 9 665 268 231 84 66 chr15 10553763 10553930 -92941044 + LTR33A LTR ERVL 7 176 -344 9 665 325 294 9 38 chr15 10553983 10554089 -92940885 - PB1D7 SINE Alu -1 119 17 9 665 1157 156 29 5 chr15 10554630 10554836 -92940138 + RLTR31A_Mm LTR ERVK 1 211 -373 9 665 310 212 72 169 chr15 10554838 10555003 -92939971 + RLTR31A_Mm LTR ERVK 433 584 0 9 665 864 248 134 40 chr15 10555003 10555160 -92939814 + ORR1D2 LTR MaLR 55 230 -140 9 665 351 0 0 0 chr15 10555160 10555199 -92939775 + (CCTG)n Simple_repeat Simple_repeat 4 42 0 9 665 864 248 134 40 chr15 10555199 10555318 -92939656 + ORR1D2 LTR MaLR 231 357 -13 9 665 2330 224 72 91 chr15 10555327 10556104 -92938870 - ORR1D2-int LTR MaLR -577 793 32 9 665 1992 181 117 14 chr15 10556133 10556559 -92938415 + RLTR28 LTR ERVL 41 510 -14 1 665 993 228 169 32 chr15 10556593 10556901 -92938073 - ORR1D2 LTR MaLR 0 370 21 9 665 845 264 20 0 chr15 10556989 10557190 -92937784 - B3 SINE B2 -9 207 3 1 665 978 196 9 47 chr15 10557460 10557674 -92937300 + B3 SINE B2 1 206 -10 1 665 573 120 0 0 chr15 10558219 10558311 -92936663 + (TC)n Simple_repeat Simple_repeat 1 92 0 1 665 565 258 136 0 chr15 10560181 10560379 -92934595 + L1MB5 LINE L1 5820 6044 -130 1 665 292 247 0 0 chr15 10560399 10560472 -92934502 + L1MB2 LINE L1 6099 6171 0 1 665 3548 76 8 2 chr15 10560614 10561087 -92933887 + L1_Mus4 LINE L1 6151 6626 -10 1 665 1060 70 0 0 chr15 10561090 10561232 -92933742 + B1_Mm SINE Alu 6 147 0 1 665 198 0 0 0 chr15 10561232 10561254 -92933720 + (A)n Simple_repeat Simple_repeat 1 22 0 1 665 270 350 0 20 chr15 10561786 10561885 -92933089 - MER58B DNA MER1_type -24 317 221 1 665 582 243 0 20 chr15 10562122 10562269 -92932705 + B1_Mur2 SINE Alu 6 149 0 1 665 1389 90 16 11 chr15 10564383 10564573 -92930401 + B2_Mm2 SINE B2 1 191 -4 1 665 436 288 6 0 chr15 10566275 10566452 -92928522 + (TA)n Simple_repeat Simple_repeat 1 178 0 1 665 1179 29 0 0 chr15 10568105 10568242 -92926732 - B1_Mm SINE Alu -9 138 2 1 665 474 271 74 56 chr15 10568993 10569224 -92925750 + MTE2a LTR MaLR 128 362 -17 1 665 244 303 11 5 chr15 10569817 10569910 -92925064 - MIR SINE MIR -86 182 92 1 665 396 0 0 0 chr15 10570236 10570280 -92924694 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 665 273 197 0 0 chr15 10570846 10570907 -92924067 + (TATG)n Simple_repeat Simple_repeat 4 64 0 1 665 215 360 13 0 chr15 10570950 10571025 -92923949 - ID4_ SINE ID -2 81 6 1 665 288 98 0 0 chr15 10573410 10573444 -92921530 + (T)n Simple_repeat Simple_repeat 1 34 0 1 665 1111 56 35 0 chr15 10573444 10573586 -92921388 - B1_Mus2 SINE Alu 0 147 1 1 665 288 98 0 0 chr15 10573586 10573602 -92921372 + (T)n Simple_repeat Simple_repeat 1 16 0 1 665 416 273 90 15 chr15 10574250 10574437 -92920537 - B3A SINE B2 -12 204 1 1 665 209 328 1 23 chr15 10574942 10575049 -92919925 + MIRb SINE MIR 156 260 -2 1 665 436 256 219 0 chr15 10575715 10575852 -92919122 - B3A SINE B2 -30 168 2 1 665 21 0 0 0 chr15 10575904 10575925 -92919049 + AT_rich Low_complexity Low_complexity 1 21 0 1 665 1174 214 50 14 chr15 10576192 10576472 -92918502 - MTD LTR MaLR -2 417 128 1 665 337 39 39 0 chr15 10578518 10578569 -92916405 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 665 439 233 60 0 chr15 10578891 10579007 -92915967 - ID_B1 SINE B4 0 224 102 1 665 277 241 0 0 chr15 10579034 10579088 -92915886 + RSINE1 SINE B4 26 79 -86 1 665 528 48 0 56 chr15 10579182 10579271 -92915703 - L1Md_F2 LINE L1 0 6582 6499 1 665 4142 100 26 3 chr15 10580263 10580875 -92914099 - L1_Mus3 LINE L1 -1098 4785 4160 1 665 8228 83 7 2 chr15 10580875 10582720 -92912254 + L1_Mus3 LINE L1 4780 6633 -5 1 665 283 307 68 19 chr15 10582825 10582928 -92912046 - B1F1 SINE Alu -40 109 2 1 665 231 238 78 16 chr15 10583296 10583360 -92911614 - ID4 SINE ID -6 77 10 1 665 1154 206 93 4 chr15 10583563 10583821 -92911153 + MT2A LTR ERVL 1 281 -252 1 665 1003 68 27 0 chr15 10583823 10583969 -92911005 + B2_Mm1t SINE B2 39 188 -5 1 665 1220 194 225 86 chr15 10584053 10584520 -92910454 - MT2A LTR ERVL 0 533 2 1 665 282 305 93 60 chr15 10585792 10585942 -92909032 + MLT2C2 LTR ERVL 32 186 -278 1 665 597 330 46 57 chr15 10586108 10586474 -92908500 - MLT1B LTR MaLR -10 380 19 1 665 598 322 57 15 chr15 10586613 10586875 -92908099 + B4A SINE B4 2 274 -18 1 665 279 0 0 0 chr15 10586948 10586979 -92907995 + (TGGA)n Simple_repeat Simple_repeat 3 33 0 1 665 23 0 0 0 chr15 10587016 10587039 -92907935 + AT_rich Low_complexity Low_complexity 1 23 0 1 665 345 301 12 0 chr15 10587386 10587469 -92907505 + B3A SINE B2 71 154 -44 1 665 1244 6 40 0 chr15 10587476 10587649 -92907325 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1 665 1120 22 54 6 chr15 10587671 10588207 -92906767 + (TCTA)n Simple_repeat Simple_repeat 1 562 0 1 665 547 280 35 0 chr15 10588278 10588421 -92906553 + B1_Mur1 SINE Alu 2 149 0 1 665 517 227 86 0 chr15 10588441 10588569 -92906405 + B1_Mur4 SINE Alu 1 139 -11 1 665 279 236 0 0 chr15 10588570 10588642 -92906332 + GA-rich Low_complexity Low_complexity 1 72 0 1 665 226 300 151 92 chr15 10588766 10589005 -92905969 + RLTR12B LTR ERVK 18 270 -258 1 665 1145 64 0 0 chr15 10589602 10589743 -92905231 + B1_Mus1 SINE Alu 2 142 -6 1 665 468 0 0 0 chr15 10589745 10589797 -92905177 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 1 665 525 281 43 82 chr15 10590558 10590825 -92904149 + MLT1G3 LTR MaLR 140 401 -194 1 665 991 79 59 7 chr15 10590854 10591006 -92903968 + B2_Mm2 SINE B2 10 169 -26 1 665 279 0 0 0 chr15 10591011 10591042 -92903932 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 665 306 224 15 0 chr15 10591169 10591236 -92903738 - ID4_ SINE ID -11 72 5 1 665 21 0 0 0 chr15 10592568 10592589 -92902385 + AT_rich Low_complexity Low_complexity 1 21 0 1 665 575 279 66 14 chr15 10592727 10592938 -92902036 + ID_B1 SINE B4 1 222 -2 1 665 180 179 0 0 chr15 10593231 10593270 -92901704 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 665 993 60 104 0 chr15 10593362 10593496 -92901478 + B1_Mus1 SINE Alu 1 148 0 1 665 25 65 0 0 chr15 10594223 10594269 -92900705 + AT_rich Low_complexity Low_complexity 1 46 0 1 665 342 0 0 0 chr15 10594577 10594615 -92900359 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 665 189 0 0 0 chr15 10594615 10594635 -92900339 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 665 399 301 2 34 chr15 10595056 10595195 -92899779 + MIRc SINE MIR 52 189 -87 1 665 297 303 0 0 chr15 10596012 10596088 -92898886 + B1F SINE Alu 73 148 -1 1 665 449 306 166 0 chr15 10596093 10596250 -92898724 + B3A SINE B2 6 188 -10 1 665 438 79 0 0 chr15 10596297 10596360 -92898614 + (TAA)n Simple_repeat Simple_repeat 2 64 0 1 665 706 211 32 43 chr15 10596365 10596553 -92898421 + B3 SINE B2 28 213 -3 1 665 384 271 56 0 chr15 10596793 10596900 -92898074 + RSINE1 SINE B4 3 115 -50 1 665 376 330 42 51 chr15 10597261 10597475 -92897499 + MLT1A0 LTR MaLR 24 235 -130 1 665 580 276 39 34 chr15 10600359 10600565 -92894409 + MLT1B LTR MaLR 1 207 -183 1 665 1716 166 165 6 chr15 10600595 10600935 -92894039 + ORR1B1 LTR MaLR 1 394 0 1 665 243 103 0 0 chr15 10601312 10601351 -92893623 + (GGGA)n Simple_repeat Simple_repeat 4 42 0 1 665 321 318 47 7 chr15 10603563 10603712 -92891262 - Charlie5 DNA MER1_type -235 2389 2235 1 665 386 218 111 61 chr15 10604000 10604181 -92890793 + B3A SINE B2 9 198 0 1 665 886 267 113 12 chr15 10604864 10605190 -92889784 - L1_Mur3 LINE L1 -136 5744 5386 1 665 349 332 87 26 chr15 10605190 10605419 -92889555 - B4 SINE B4 -48 244 2 1 665 225 94 0 0 chr15 10605947 10605979 -92888995 + (G)n Simple_repeat Simple_repeat 1 32 0 1 665 318 269 92 9 chr15 10605996 10606105 -92888869 - MER5A DNA MER1_type -63 126 9 1 665 705 209 96 5 chr15 10607221 10607409 -92887565 + B3 SINE B2 5 209 -7 1 665 516 317 71 50 chr15 10607728 10607967 -92887007 + MER2 DNA MER2_type 11 254 -91 1 665 22 0 0 0 chr15 10610297 10610319 -92884655 + AT_rich Low_complexity Low_complexity 1 22 0 1 665 210 105 0 0 chr15 10610326 10610364 -92884610 + (TC)n Simple_repeat Simple_repeat 2 39 0 1 665 2037 139 94 14 chr15 10610901 10611251 -92883723 + ORR1C1 LTR MaLR 1 378 0 1 665 253 304 42 108 chr15 10611992 10612206 -92882768 + B4A SINE B4 31 230 -62 1 665 246 62 0 0 chr15 10612772 10612804 -92882170 + (A)n Simple_repeat Simple_repeat 1 32 0 1 665 253 229 13 103 chr15 10613882 10613914 -92881060 - BC1_Mm scRNA scRNA -56 96 26 1 665 271 196 22 0 chr15 10613914 10613960 -92881014 - ID SINE ID -151 73 27 1 665 516 106 0 0 chr15 10614172 10614257 -92880717 + (TTCC)n Simple_repeat Simple_repeat 4 88 0 1 665 670 258 35 61 chr15 10614416 10614647 -92880327 + B4A SINE B4 8 232 -60 1 665 465 19 0 0 chr15 10614697 10614751 -92880223 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 665 372 248 104 32 chr15 10614776 10614901 -92880073 + B3A SINE B2 1 134 -64 1 665 450 0 0 0 chr15 10614901 10614951 -92880023 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 665 985 248 89 106 chr15 10615145 10615618 -92879356 + MLT1C LTR MaLR 3 467 0 1 83 277 266 66 95 chr15 10616724 10616861 -92878113 - B1F1 SINE Alu -12 137 5 1 666 510 61 0 0 chr15 10618463 10618529 -92876445 + (TCTCCC)n Simple_repeat Simple_repeat 3 68 0 1 666 294 29 0 0 chr15 10618530 10618565 -92876409 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 666 345 266 0 0 chr15 10618672 10618751 -92876223 - ID4 SINE ID -3 80 2 1 666 205 229 0 20 chr15 10618933 10618982 -92875992 + MIR SINE MIR 79 126 -82 1 666 324 225 41 27 chr15 10619695 10619768 -92875206 + PB1D7 SINE Alu 33 106 -14 1 666 29 0 0 0 chr15 10619800 10619829 -92875145 + AT_rich Low_complexity Low_complexity 1 29 0 1 666 605 320 70 16 chr15 10620520 10620827 -92874147 - L1MA8 LINE L1 -49 6242 5920 1 666 684 198 6 22 chr15 10621628 10621809 -92873165 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 2 666 279 0 0 0 chr15 10623023 10623054 -92871920 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 2 666 465 50 0 0 chr15 10623086 10623146 -92871828 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 666 1538 53 0 11 chr15 10624130 10624321 -92870653 - B2_Mm2 SINE B2 -5 190 2 2 666 228 230 66 26 chr15 10624559 10624635 -92870339 + L1MB7 LINE L1 6029 6107 -77 2 666 3753 101 18 21 chr15 10627294 10627852 -92867122 + Lx4A LINE L1 6501 7056 -2 2 666 370 293 154 21 chr15 10628164 10628443 -92866531 - MLT1B LTR MaLR -10 380 65 2 666 922 161 7 0 chr15 10628616 10628765 -92866209 - B1_Mur4 SINE Alu 0 150 1 2 666 1294 52 76 0 chr15 10629268 10629440 -92865534 + B2_Mm2 SINE B2 2 186 -9 2 666 953 116 182 45 chr15 10630105 10630303 -92864671 - URR1B DNA MER1_type 0 225 1 2 666 319 287 0 31 chr15 10630555 10630652 -92864322 + PB1D10 SINE Alu 23 116 -1 2 666 561 236 60 40 chr15 10630706 10630905 -92864069 + L1M5 LINE L1 5546 5748 -431 2 666 331 200 15 0 chr15 10632435 10632500 -92862474 - ID4 SINE ID -17 66 1 2 666 329 311 77 18 chr15 10632556 10632726 -92862248 + MER33 DNA MER1_type 5 184 -140 2 666 714 55 9 18 chr15 10633604 10633714 -92861260 + (TA)n Simple_repeat Simple_repeat 2 110 0 2 666 2034 272 139 5 chr15 10633725 10634493 -92860481 - RCHARR1 DNA MER1_type -101 873 3 2 666 961 126 51 67 chr15 10635188 10635383 -92859591 + B2_Mm2 SINE B2 2 193 -2 2 666 351 98 0 0 chr15 10636731 10636792 -92858182 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 666 270 258 121 0 chr15 10638167 10638233 -92856741 + PB1D10 SINE Alu 1 74 -43 2 666 796 224 13 75 chr15 10638407 10638634 -92856340 + B3 SINE B2 2 214 -2 2 666 288 0 0 0 chr15 10640165 10640197 -92854777 + (T)n Simple_repeat Simple_repeat 1 32 0 2 666 1173 62 7 0 chr15 10640567 10640713 -92854261 + B1_Mm SINE Alu 1 147 0 2 666 425 309 27 7 chr15 10642207 10642357 -92852617 + RSINE1 SINE B4 7 159 -6 2 666 198 0 0 0 chr15 10642413 10642435 -92852539 + (TC)n Simple_repeat Simple_repeat 1 22 0 2 666 390 42 0 0 chr15 10642435 10642482 -92852492 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 666 402 21 0 0 chr15 10644389 10644436 -92850538 + (TCC)n Simple_repeat Simple_repeat 1 47 0 2 666 22 0 0 0 chr15 10644509 10644531 -92850443 + GC_rich Low_complexity Low_complexity 1 22 0 2 666 4186 139 92 0 chr15 10646529 10647203 -92847771 - RMER19A LTR ERVK -1 736 1 2 666 225 0 0 0 chr15 10647310 10647335 -92847639 + (T)n Simple_repeat Simple_repeat 1 25 0 2 666 433 259 97 9 chr15 10647787 10647900 -92847074 + ID_B1 SINE B4 92 214 -10 2 666 219 69 0 0 chr15 10648675 10648704 -92846270 + (CGAT)n Simple_repeat Simple_repeat 1 29 0 2 666 330 254 85 31 chr15 10649145 10649275 -92845699 - RMER15 LTR ERVL -17 558 422 2 666 189 74 0 0 chr15 10649528 10649555 -92845419 + (TTGG)n Simple_repeat Simple_repeat 2 28 0 2 666 824 44 26 0 chr15 10649641 10649755 -92845219 + B1_Mm SINE Alu 31 147 0 2 666 261 83 0 0 chr15 10649759 10649795 -92845179 + (A)n Simple_repeat Simple_repeat 1 36 0 2 666 294 29 0 0 chr15 10649861 10649896 -92845078 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 666 209 179 0 0 chr15 10649896 10649935 -92845039 + G-rich Low_complexity Low_complexity 1 39 0 2 666 198 0 0 0 chr15 10650448 10650470 -92844504 + (T)n Simple_repeat Simple_repeat 1 22 0 2 666 1080 36 72 0 chr15 10651726 10651864 -92843110 - B1_Mus1 SINE Alu 0 148 1 2 666 1797 149 19 111 chr15 10653125 10653541 -92841433 - ORR1C1 LTR MaLR 0 378 1 2 666 23 33 0 0 chr15 10654219 10654249 -92840725 + AT_rich Low_complexity Low_complexity 1 30 0 2 666 316 200 0 110 chr15 10654365 10654438 -92840536 + Lx8 LINE L1 6675 6739 -734 2 666 1667 236 156 44 chr15 10654435 10654870 -92840104 + Lx8 LINE L1 6846 7355 -118 2 666 547 244 189 17 chr15 10654870 10655045 -92839929 + B3 SINE B2 1 205 -11 2 666 1667 236 156 44 chr15 10655045 10655172 -92839802 + Lx8 LINE L1 7356 7471 -2 2 666 284 292 15 77 chr15 10655390 10655520 -92839454 + MER34 LTR ERV1 1 122 -420 2 666 294 271 83 23 chr15 10655692 10655824 -92839150 + LTR48 LTR ERV1 481 620 -167 2 666 21 0 0 0 chr15 10656293 10656314 -92838660 + AT_rich Low_complexity Low_complexity 1 21 0 2 666 390 330 9 69 chr15 10656506 10656724 -92838250 + L1MEd LINE L1 807 1011 -5108 2 666 247 211 0 19 chr15 10656936 10656989 -92837985 + MLT1A1 LTR MaLR 291 342 -66 2 666 1951 86 12 84 chr15 10657000 10657343 -92837631 - ORR1A3 LTR MaLR -8 318 1 2 666 354 249 28 11 chr15 10657658 10657802 -92837172 + L1MEd LINE L1 1424 1585 -4564 2 666 959 126 21 24 chr15 10658024 10658356 -92836618 + CT-rich Low_complexity Low_complexity 1 331 0 2 666 558 29 0 0 chr15 10658354 10658422 -92836552 + (TC)n Simple_repeat Simple_repeat 1 68 0 2 666 197 65 32 0 chr15 10658539 10658570 -92836404 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 2 666 1159 68 7 7 chr15 10658570 10658717 -92836257 - B1_Mus1 SINE Alu 0 148 2 2 666 686 271 99 48 chr15 10658801 10659115 -92835859 + MLT1B LTR MaLR 61 390 0 2 666 358 280 40 10 chr15 10659202 10659303 -92835671 + PB1D10 SINE Alu 5 108 -9 2 666 636 226 153 16 chr15 10660094 10660222 -92834752 - B3 SINE B2 -1 215 63 2 666 1145 43 7 0 chr15 10660222 10660360 -92834614 + B1_Mus1 SINE Alu 4 142 -6 2 666 642 13 0 0 chr15 10660361 10660436 -92834538 + (CA)n Simple_repeat Simple_repeat 1 75 0 2 666 636 226 153 16 chr15 10660436 10660494 -92834480 - B3 SINE B2 -154 62 1 2 666 951 140 0 0 chr15 10660578 10660735 -92834239 + (TTTC)n Simple_repeat Simple_repeat 4 160 0 2 666 595 39 0 0 chr15 10660735 10660812 -92834162 - B1_Mus2 SINE Alu -12 135 59 2 666 906 238 87 0 chr15 10660900 10661152 -92833822 - B4A SINE B4 -18 274 1 2 666 254 225 14 40 chr15 10661158 10661232 -92833742 - PB1D10 SINE Alu -3 114 43 2 666 408 88 0 0 chr15 10662112 10662169 -92832805 + (TTTC)n Simple_repeat Simple_repeat 3 59 0 2 666 1141 102 102 0 chr15 10662169 10662346 -92832628 - B2_Mm2 SINE B2 0 195 1 2 666 841 304 82 30 chr15 10662524 10662853 -92832121 - MLT1A0 LTR MaLR -19 346 1 2 666 219 69 0 0 chr15 10662901 10662930 -92832044 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 2 666 207 0 0 0 chr15 10664057 10664080 -92830894 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 666 22 0 0 0 chr15 10664195 10664217 -92830757 + AT_rich Low_complexity Low_complexity 1 22 0 2 666 295 183 0 0 chr15 10664222 10664282 -92830692 - ORR1E LTR MaLR 0 379 320 2 666 639 278 126 28 chr15 10664310 10664565 -92830409 + B4A SINE B4 7 286 -6 2 666 798 246 5 30 chr15 10664650 10664851 -92830123 - ORR1E LTR MaLR -163 196 1 2 666 237 355 9 0 chr15 10664977 10665084 -92829890 + CT-rich Low_complexity Low_complexity 4 111 0 2 666 312 266 34 50 chr15 10665389 10665508 -92829466 + MIRb SINE MIR 25 141 -127 2 666 245 253 38 0 chr15 10666208 10666287 -92828687 - MIR3 SINE MIR -1 207 126 2 666 301 232 81 40 chr15 10667071 10667170 -92827804 - MER63D DNA AcHobo -664 397 295 2 666 579 331 76 62 chr15 10667277 10667998 -92826976 - Kanga1c DNA Tc2 -26 703 1 2 666 627 261 8 20 chr15 10669419 10669589 -92825385 + ID_B1 SINE B4 41 206 -18 2 666 333 228 0 0 chr15 10670588 10670667 -92824307 + CT-rich Low_complexity Low_complexity 1 79 0 2 666 3034 26 3 0 chr15 10671480 10671825 -92823149 + ORR1A1 LTR MaLR 1 346 0 2 666 243 0 0 0 chr15 10672174 10672201 -92822773 + (A)n Simple_repeat Simple_repeat 1 27 0 2 666 22 0 0 0 chr15 10672207 10672229 -92822745 + AT_rich Low_complexity Low_complexity 1 22 0 2 666 312 27 0 0 chr15 10672859 10672896 -92822078 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 666 422 18 53 0 chr15 10673208 10673265 -92821709 + (TTTTC)n Simple_repeat Simple_repeat 3 62 0 2 666 1187 54 7 0 chr15 10673265 10673412 -92821562 - B1_Mus1 SINE Alu 0 148 1 2 666 4426 66 24 29 chr15 10673414 10674004 -92820970 + LTRIS_Mus LTR ERV1 1 587 0 2 666 342 0 0 0 chr15 10674139 10674177 -92820797 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 666 1105 225 109 89 chr15 10674205 10674664 -92820310 + RMER13A LTR ERVK 1 468 -392 2 666 23 0 0 0 chr15 10675301 10675324 -92819650 + AT_rich Low_complexity Low_complexity 1 23 0 2 666 257 264 62 54 chr15 10675326 10675438 -92819536 - PB1D10 SINE Alu 0 117 5 2 666 517 309 20 0 chr15 10675369 10675521 -92819453 - ID_B1 SINE B4 -67 157 3 2 666 216 67 0 0 chr15 10676935 10676965 -92818009 + (TTTTA)n Simple_repeat Simple_repeat 5 34 0 2 666 927 152 0 0 chr15 10679044 10679208 -92815766 + (TGAA)n Simple_repeat Simple_repeat 1 164 0 2 666 222 372 30 30 chr15 10679365 10679498 -92815476 - L3 LINE CR1 -26 4463 4331 2 666 664 295 49 26 chr15 10679620 10679846 -92815128 - RMER15 LTR ERVL -47 528 298 2 666 267 266 30 68 chr15 10679894 10680027 -92814947 - RMER15 LTR ERVL -445 130 3 2 666 234 314 193 8 chr15 10680027 10680146 -92814828 - MIRb SINE MIR -81 187 47 2 666 240 247 39 52 chr15 10680193 10680270 -92814704 + MIR3 SINE MIR 111 186 -22 2 666 415 295 61 131 chr15 10680680 10681039 -92813935 + MLT1B LTR MaLR 18 351 -39 2 666 28 48 0 0 chr15 10682630 10682672 -92812302 + AT_rich Low_complexity Low_complexity 1 42 0 2 666 23 33 0 0 chr15 10682720 10682750 -92812224 + AT_rich Low_complexity Low_complexity 1 30 0 2 666 213 39 0 0 chr15 10683015 10683041 -92811933 + (T)n Simple_repeat Simple_repeat 1 26 0 2 666 8292 51 1 82 chr15 10683043 10684766 -92810208 - L1Md_F2 LINE L1 0 6582 5055 2 666 7572 170 30 46 chr15 10685383 10685654 -92809320 - Lx5 LINE L1 -5 7045 6822 3 666 357 24 0 0 chr15 10685654 10685696 -92809278 + (CAGG)n Simple_repeat Simple_repeat 1 42 0 3 666 7601 143 26 22 chr15 10685696 10687755 -92807219 - Lx5 LINE L1 -229 6821 4711 3 666 1447 57 0 6 chr15 10687908 10688085 -92806889 + B2_Mm2 SINE B2 1 176 -19 3 666 21 36 0 0 chr15 10688091 10688119 -92806855 + AT_rich Low_complexity Low_complexity 1 28 0 3 666 615 142 3 3 chr15 10689093 10689213 -92805761 + B1_Mus2 SINE Alu 1 120 0 3 666 226 337 9 19 chr15 10690226 10690332 -92804642 - MER45A DNA Tip100 -2 176 72 3 666 2501 210 10 12 chr15 10690386 10690902 -92804072 - RMER5 LTR ERV1 -19 515 1 3 666 369 0 0 0 chr15 10691132 10691173 -92803801 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 666 364 316 18 15 chr15 10692295 10692426 -92802548 - MIR SINE MIR -108 168 31 3 666 203 305 0 0 chr15 10692832 10692891 -92802083 - L2b LINE L2 -19 3356 3298 3 666 1889 123 33 62 chr15 10693102 10693487 -92801487 - ORR1B1 LTR MaLR -8 386 19 3 666 279 0 0 0 chr15 10693608 10693639 -92801335 + (T)n Simple_repeat Simple_repeat 1 31 0 3 666 1923 146 100 0 chr15 10693894 10694244 -92800730 - ORR1B1 LTR MaLR -9 385 1 3 666 187 152 0 42 chr15 10694347 10694395 -92800579 + CT-rich Low_complexity Low_complexity 4 49 0 3 666 899 295 83 79 chr15 10694778 10695234 -92799740 + MLT2B1 LTR ERVL 1 465 -55 3 666 634 23 11 22 chr15 10695234 10695323 -92799651 + (TCTA)n Simple_repeat Simple_repeat 2 89 0 3 666 899 295 83 79 chr15 10695323 10695374 -92799600 + MLT2B1 LTR ERVL 466 510 -10 3 666 314 335 140 44 chr15 10695797 10696118 -92798856 - MLT1A1 LTR MaLR 0 408 57 3 666 279 0 0 0 chr15 10696142 10696173 -92798801 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 666 335 398 59 17 chr15 10696397 10696752 -92798222 + LTR16C LTR ERVL 118 487 -2 3 666 334 291 39 0 chr15 10696898 10697001 -92797973 + ID_B1 SINE B4 70 176 -48 3 666 474 229 0 45 chr15 10696917 10697027 -92797947 + PB1D10 SINE Alu 12 116 -1 3 666 519 17 0 0 chr15 10697380 10697440 -92797534 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 666 579 248 0 0 chr15 10697547 10697668 -92797306 - B3 SINE B2 -95 121 1 3 666 279 0 0 0 chr15 10697696 10697727 -92797247 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 666 423 234 45 9 chr15 10697727 10697839 -92797135 - RSINE1 SINE B4 -46 119 4 3 666 227 31 0 30 chr15 10698200 10698233 -92796741 + (TAA)n Simple_repeat Simple_repeat 2 33 0 3 666 248 315 144 15 chr15 10699176 10699308 -92795666 - MIRb SINE MIR -46 222 74 3 666 198 0 0 0 chr15 10700898 10700920 -92794054 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 666 199 120 71 12 chr15 10700938 10701022 -92793952 + (CAGAGA)n Simple_repeat Simple_repeat 4 92 0 3 666 42051 6 0 1 chr15 10701713 10708660 -92786314 - L1Md_A LINE L1 0 6582 1 3 666 625 113 113 0 chr15 10708741 10708856 -92786118 - B1_Mur3 SINE Alu -1 148 21 3 666 330 26 0 0 chr15 10708861 10708900 -92786074 + (CCA)n Simple_repeat Simple_repeat 1 39 0 3 666 512 77 13 0 chr15 10708972 10709050 -92785924 + (CA)n Simple_repeat Simple_repeat 1 79 0 3 666 290 340 9 9 chr15 10710370 10710477 -92784497 + Charlie1a DNA MER1_type 7 113 -1342 3 666 1169 184 131 18 chr15 10710658 10710940 -92784034 - MTC LTR MaLR 0 421 108 3 666 37884 25 2 8 chr15 10710947 10716126 -92778848 + L1Md_T LINE L1 441 5586 -297 3 666 8473 39 1 0 chr15 10716127 10717121 -92777853 + L1Md_T LINE L1 5588 6582 0 3 666 1014 122 64 30 chr15 10717145 10717347 -92777627 - RLTR28 LTR ERVL 0 524 316 3 666 349 211 0 0 chr15 10717343 10717414 -92777560 - MTC LTR MaLR -343 78 8 3 666 2902 134 133 11 chr15 10717411 10717938 -92777036 - RMER19C LTR ERVK -20 591 1 3 666 407 313 60 0 chr15 10717957 10718123 -92776851 + Charlie1a DNA MER1_type 369 544 -911 3 666 232 114 23 0 chr15 10718558 10718602 -92776372 + Charlie1a DNA MER1_type 581 625 -830 3 666 419 293 95 45 chr15 10718718 10718961 -92776013 + Charlie1a DNA MER1_type 650 904 -551 3 666 238 315 0 53 chr15 10719011 10719043 -92775931 - BC1_Mm scRNA scRNA -49 103 75 3 666 534 31 0 0 chr15 10719043 10719107 -92775867 + (TTCC)n Simple_repeat Simple_repeat 4 67 0 3 666 405 0 0 0 chr15 10719107 10719151 -92775823 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 3 666 238 315 0 53 chr15 10719151 10719211 -92775763 - BC1_Mm scRNA scRNA -78 74 16 3 666 713 315 82 20 chr15 10719359 10719651 -92775323 - MER2 DNA MER2_type -35 310 1 3 666 804 244 30 115 chr15 10719655 10719915 -92775059 + Charlie1a DNA MER1_type 1057 1299 -156 3 666 701 234 136 0 chr15 10719915 10720099 -92774875 - B3 SINE B2 -6 210 2 3 666 804 244 30 115 chr15 10720099 10720204 -92774770 + Charlie1a DNA MER1_type 1300 1391 -64 3 666 288 322 32 43 chr15 10721273 10721367 -92773607 - B1F SINE Alu -56 93 1 3 666 192 265 147 0 chr15 10721802 10721870 -92773104 - L2a LINE L2 -232 3194 3117 3 666 1233 60 0 0 chr15 10722363 10722530 -92772444 + (CA)n Simple_repeat Simple_repeat 2 168 0 3 666 23 54 0 0 chr15 10722669 10722706 -92772268 + AT_rich Low_complexity Low_complexity 1 37 0 3 666 232 200 26 103 chr15 10722794 10722872 -92772102 - Lx9 LINE L1 -186 7458 7387 3 666 246 211 123 27 chr15 10722903 10722976 -92771998 - MLT1A1 LTR MaLR -325 83 4 3 666 487 319 129 34 chr15 10724142 10724405 -92770569 - MER2 DNA MER2_type -48 297 10 3 666 2972 287 62 39 chr15 10724425 10724510 -92770464 + Lx8 LINE L1 6337 6406 -1067 3 666 198 0 0 0 chr15 10724510 10724532 -92770442 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 3 666 2972 287 62 39 chr15 10724532 10725424 -92769550 + Lx8 LINE L1 6407 7337 -136 3 666 313 183 28 14 chr15 10725541 10725613 -92769361 + B4A SINE B4 202 274 -18 3 666 891 57 0 0 chr15 10725615 10725737 -92769237 + (CA)n Simple_repeat Simple_repeat 1 122 0 3 666 1191 240 62 23 chr15 10727510 10727817 -92767157 + MTEa LTR MaLR 30 348 -31 3 666 608 202 16 27 chr15 10727818 10728001 -92766973 - Lx9 LINE L1 -1 7643 7463 3 666 459 63 0 0 chr15 10728016 10728079 -92766895 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 666 1148 254 54 7 chr15 10728086 10728363 -92766611 - B4 SINE B4 0 292 3 3 666 2036 104 0 62 chr15 10728393 10728732 -92766242 + ORR1A3 LTR MaLR 1 318 -8 3 666 330 26 0 0 chr15 10729602 10729641 -92765333 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 666 767 272 53 104 chr15 10730008 10730402 -92764572 - MTEa LTR MaLR -1 378 5 3 666 861 10 0 0 chr15 10730497 10730595 -92764379 + (GAA)n Simple_repeat Simple_repeat 3 100 0 3 666 498 109 9 43 chr15 10730598 10730713 -92764261 + G-rich Low_complexity Low_complexity 6 116 0 3 666 410 336 94 13 chr15 10730760 10731068 -92763906 - Charlie4a DNA MER1_type -4 504 172 3 666 703 172 97 0 chr15 10731080 10731214 -92763760 + B1_Mur2 SINE Alu 1 147 -2 3 666 644 36 12 0 chr15 10731264 10731347 -92763627 + (TTTTC)n Simple_repeat Simple_repeat 4 87 0 3 666 198 0 0 0 chr15 10732298 10732320 -92762654 + (TA)n Simple_repeat Simple_repeat 1 22 0 3 666 1057 112 87 17 chr15 10732402 10732575 -92762399 - B2_Mm1t SINE B2 -8 185 1 3 666 696 24 0 0 chr15 10733041 10733123 -92761851 + (TTTC)n Simple_repeat Simple_repeat 4 85 0 3 666 2016 182 53 47 chr15 10733153 10733644 -92761330 - RMER5 LTR ERV1 -40 494 1 3 666 232 179 83 19 chr15 10734083 10734191 -92760783 + (TATATG)n Simple_repeat Simple_repeat 2 116 0 3 666 1220 169 52 16 chr15 10734205 10734457 -92760517 - RLTR28 LTR ERVL -14 510 250 3 666 1854 154 74 6 chr15 10734466 10734819 -92760155 - MTC LTR MaLR -44 377 1 3 666 1331 165 36 0 chr15 10734821 10734866 -92760108 - RLTR28 LTR ERVL -266 258 214 3 666 225 0 0 0 chr15 10734866 10734891 -92760083 + (TGGGGG)n Simple_repeat Simple_repeat 6 30 0 3 666 1331 165 36 0 chr15 10734891 10735094 -92759880 - RLTR28 LTR ERVL -311 213 2 3 666 26 0 0 0 chr15 10735183 10735209 -92759765 + AT_rich Low_complexity Low_complexity 1 26 0 3 666 38862 38 1 0 chr15 10736264 10740038 -92754936 - L1Md_T LINE L1 0 6585 2803 3 666 198 0 0 0 chr15 10740038 10740060 -92754914 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 3 666 38862 46 1 6 chr15 10740060 10742502 -92752472 - L1Md_T LINE L1 -3084 2802 280 3 666 186 180 49 0 chr15 10742885 10742946 -92752028 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 666 835 231 50 29 chr15 10743017 10743298 -92751676 - B4A SINE B4 -4 288 2 3 666 642 273 91 12 chr15 10744154 10744406 -92750568 + MLT1C LTR MaLR 192 463 -4 3 666 308 327 38 9 chr15 10745618 10745723 -92749251 + B4A SINE B4 157 264 -28 3 666 233 291 80 18 chr15 10745871 10745983 -92748991 - MLT1E2 LTR MaLR -475 152 34 3 666 22 0 0 0 chr15 10747179 10747201 -92747773 + AT_rich Low_complexity Low_complexity 1 22 0 3 666 297 0 0 0 chr15 10747201 10747234 -92747740 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 666 847 314 38 11 chr15 10747243 10747507 -92747467 - B4A SINE B4 -21 271 1 3 83 357 305 114 13 chr15 10747864 10748100 -92746874 - LTR16A LTR ERVL -183 268 9 3 667 1034 295 92 0 chr15 10749262 10749587 -92745387 - MTD LTR MaLR -32 387 33 3 667 2010 158 12 70 chr15 10749764 10750165 -92744809 - ORR1B1 LTR MaLR -8 386 9 3 667 245 223 125 0 chr15 10750484 10750562 -92744412 - MLT1B LTR MaLR -16 374 304 3 667 378 168 109 27 chr15 10750614 10750724 -92744250 + RLTR15 LTR ERVK 3 121 -238 3 667 362 171 14 28 chr15 10750740 10750812 -92744162 + RLTR25B LTR ERVK 1 71 -957 3 667 655 166 0 137 chr15 10750802 10750963 -92744011 + RLTR25B LTR ERVK 890 1028 0 3 667 288 260 10 20 chr15 10750963 10751063 -92743911 + RLTR15 LTR ERVK 130 228 -131 3 667 1007 230 25 0 chr15 10751458 10751658 -92743316 - B3 SINE B2 -1 215 11 3 667 300 325 125 36 chr15 10751701 10752004 -92742970 - MLT1C LTR MaLR -87 380 51 3 667 501 0 43 0 chr15 10752092 10752161 -92742813 + (TG)n Simple_repeat Simple_repeat 2 73 0 3 667 459 0 0 0 chr15 10752678 10752729 -92742245 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 3 667 292 292 148 16 chr15 10752729 10752851 -92742123 + B3A SINE B2 59 196 -20 3 667 552 285 151 47 chr15 10753636 10754000 -92740974 + LTR16E1 LTR ERVL 9 410 -128 3 667 344 300 18 9 chr15 10753989 10754100 -92740874 - PB1D7 SINE Alu -1 119 8 3 667 404 223 82 82 chr15 10754115 10754156 -92740818 - B2_Mm2 SINE B2 0 195 155 3 667 378 0 0 0 chr15 10754156 10754198 -92740776 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 667 545 223 82 82 chr15 10754198 10754351 -92740623 - B3A SINE B2 -30 168 1 3 667 305 221 52 30 chr15 10754370 10754477 -92740497 + LTR16E1 LTR ERVL 553 640 -11 3 667 1516 256 48 35 chr15 10755137 10755537 -92739437 - MTD LTR MaLR 0 419 15 4 667 605 212 35 0 chr15 10755589 10755702 -92739272 - PB1D10 SINE Alu 0 117 1 4 667 687 167 8 8 chr15 10755755 10755882 -92739092 + ORR1B2 LTR MaLR 241 367 0 4 667 842 326 48 0 chr15 10756378 10756648 -92738326 + B4A SINE B4 10 292 0 4 667 1112 237 93 44 chr15 10757131 10757497 -92737477 + MLT1B LTR MaLR 4 387 -3 4 667 789 155 14 27 chr15 10757608 10757754 -92737220 - B1_Mur4 SINE Alu 0 150 7 4 667 521 274 152 5 chr15 10757835 10758033 -92736941 + MTEb LTR MaLR 1 227 -152 4 667 3270 133 26 16 chr15 10758039 10758611 -92736363 - RMER4B LTR ERVK -4 581 4 4 667 425 235 140 0 chr15 10758612 10758748 -92736226 + MTEb LTR MaLR 225 379 0 4 667 3566 270 167 12 chr15 10758748 10760115 -92734859 + MTEb-int LTR MaLR 1 1578 -2 4 667 954 258 135 12 chr15 10760119 10760452 -92734522 + MTEb LTR MaLR 6 379 0 4 667 547 227 7 7 chr15 10761205 10761360 -92733614 + CT-rich Low_complexity Low_complexity 1 155 0 4 667 689 183 0 0 chr15 10761362 10761482 -92733492 - B1_Mus1 SINE Alu -13 135 16 4 667 558 43 0 0 chr15 10761570 10761639 -92733335 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 667 395 294 6 139 chr15 10761712 10761878 -92733096 - B4A SINE B4 -78 146 3 4 667 266 279 86 90 chr15 10762769 10763013 -92731961 + RLTR15 LTR ERVK 49 291 -68 4 667 231 255 0 0 chr15 10764630 10764681 -92730293 + B1F SINE Alu 11 61 -88 4 667 207 100 0 0 chr15 10764902 10764932 -92730042 + (A)n Simple_repeat Simple_repeat 1 30 0 4 667 3585 15 2 0 chr15 10764966 10765361 -92729613 - MTA_Mm LTR MaLR 0 396 1 4 667 9738 19 0 0 chr15 10765361 10766459 -92728515 - MTA_Mm-int LTR MaLR 0 1098 1 4 667 3585 15 2 0 chr15 10766459 10766854 -92728120 - MTA_Mm LTR MaLR 0 396 1 4 667 373 245 68 74 chr15 10766990 10767153 -92727821 - RSINE1 SINE B4 0 165 4 4 667 31 58 0 0 chr15 10767439 10767491 -92727483 + AT_rich Low_complexity Low_complexity 1 52 0 4 667 384 303 15 22 chr15 10767723 10767858 -92727116 - Tigger5 DNA MER2_type -3 2403 2270 4 667 325 372 66 6 chr15 10767825 10768006 -92726968 - Tigger5 DNA MER2_type -2157 249 58 4 667 294 172 17 0 chr15 10768200 10768258 -92726716 + MLT2B2 LTR ERVL 1 59 -456 4 667 635 293 9 57 chr15 10768334 10768544 -92726430 + MLT2B1 LTR ERVL 364 563 -4 4 667 255 235 123 0 chr15 10768571 10768652 -92726322 - L1M5 LINE L1 -457 5667 5577 4 667 364 335 39 17 chr15 10768895 10769074 -92725900 - MLT1N2 LTR MaLR -24 538 356 4 667 203 236 26 53 chr15 10770850 10770926 -92724048 + MIRm SINE MIR 189 262 -14 4 667 410 341 6 23 chr15 10770972 10771149 -92723825 - MIR SINE MIR 0 262 89 4 667 281 240 105 0 chr15 10771330 10771444 -92723530 - MIRb SINE MIR -126 142 6 4 667 668 286 72 62 chr15 10773129 10773355 -92721619 + RLTR11B LTR ERVK 1 232 -221 4 667 648 70 0 0 chr15 10773355 10773441 -92721533 + (GGGA)n Simple_repeat Simple_repeat 1 86 0 4 667 668 288 68 52 chr15 10773441 10773642 -92721332 + RLTR11B LTR ERVK 233 494 -34 4 667 523 313 140 15 chr15 10773916 10774188 -92720786 - MLT1C LTR MaLR -128 339 34 4 667 297 277 12 24 chr15 10774443 10774455 -92720519 - ID SINE ID -136 88 5 4 667 329 239 0 27 chr15 10774455 10774528 -92720446 - ID4 SINE ID -8 75 5 4 667 241 258 144 0 chr15 10775711 10775808 -92719166 - MIR SINE MIR -112 150 40 4 667 238 303 100 10 chr15 10776060 10776160 -92718814 + PB1D10 SINE Alu 1 109 -8 4 667 556 279 285 1 chr15 10776543 10776836 -92718138 + MTE2a LTR MaLR 1 377 -2 4 667 1314 92 17 0 chr15 10777588 10777761 -92717213 + B2_Mm2 SINE B2 1 176 -19 4 667 201 154 0 0 chr15 10777776 10777815 -92717159 + CT-rich Low_complexity Low_complexity 1 39 0 4 667 513 0 0 0 chr15 10778093 10778150 -92716824 + (TTTTA)n Simple_repeat Simple_repeat 4 60 0 4 667 359 325 8 8 chr15 10778285 10778409 -92716565 + B1F1 SINE Alu 12 135 -14 4 667 1529 278 106 16 chr15 10778412 10778913 -92716061 + Lx8 LINE L1 6782 7327 -146 4 667 423 52 0 0 chr15 10779157 10779215 -92715759 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 667 5436 38 2 0 chr15 10779349 10780122 -92714852 - L1Md_F2 LINE L1 -568 6014 5241 4 667 4633 50 0 3 chr15 10780122 10780687 -92714287 + L1Md_F2 LINE L1 6015 6577 -5 4 667 22 35 0 0 chr15 10780837 10780866 -92714108 + AT_rich Low_complexity Low_complexity 1 29 0 4 667 216 0 0 0 chr15 10781284 10781308 -92713666 + (T)n Simple_repeat Simple_repeat 1 24 0 4 667 1301 96 21 0 chr15 10781334 10781522 -92713452 - B2_Mm1t SINE B2 0 193 2 4 667 711 0 0 0 chr15 10781533 10781612 -92713362 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 4 667 33 25 0 0 chr15 10781615 10781655 -92713319 + AT_rich Low_complexity Low_complexity 1 40 0 4 667 34961 74 18 2 chr15 10781660 10787764 -92707210 - L1Md_F2 LINE L1 -4 6578 373 4 667 4237 37 8 12 chr15 10787777 10788295 -92706679 - L1Md_F3 LINE L1 0 6584 6069 4 667 184 59 29 29 chr15 10788379 10788414 -92706560 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 667 602 105 9 0 chr15 10788804 10788909 -92706065 + (TC)n Simple_repeat Simple_repeat 1 106 0 4 667 677 330 72 49 chr15 10789147 10789715 -92705259 - L1MB2 LINE L1 -36 6135 5551 4 667 545 292 138 34 chr15 10789793 10790147 -92704827 - MLT1A1 LTR MaLR -2 406 16 4 667 353 326 71 55 chr15 10790163 10790416 -92704558 - MLT1B LTR MaLR -63 327 71 4 667 296 271 23 12 chr15 10790426 10790512 -92704462 - MLT1B LTR MaLR -260 130 44 4 667 393 305 71 0 chr15 10790809 10790963 -92704011 - MER58A DNA MER1_type -15 209 45 4 667 1341 80 32 5 chr15 10791244 10791433 -92703541 - B2_Mm2 SINE B2 0 195 2 4 667 189 0 0 0 chr15 10792118 10792139 -92702835 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 667 302 283 105 29 chr15 10792492 10792663 -92702311 + MER34A1 LTR ERV1 396 579 -8 4 667 411 231 66 0 chr15 10792964 10793055 -92701919 + B1F1 SINE Alu 1 97 -52 4 667 288 70 0 0 chr15 10793722 10793765 -92701209 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 667 216 0 0 0 chr15 10793769 10793793 -92701181 + (GA)n Simple_repeat Simple_repeat 2 25 0 4 667 510 309 129 23 chr15 10794967 10795279 -92699695 - MLT1A LTR MaLR -17 373 2 4 667 288 374 59 26 chr15 10795885 10796157 -92698817 - MER115 DNA Tip100 0 693 413 4 667 299 336 36 14 chr15 10796548 10796687 -92698287 + MIRc SINE MIR 127 268 0 4 667 253 300 0 0 chr15 10797020 10797090 -92697884 + MIRc SINE MIR 82 151 -117 4 667 646 307 59 39 chr15 10798271 10798576 -92696398 - MLT1C LTR MaLR -156 311 1 4 667 286 223 73 21 chr15 10798707 10798803 -92696171 - B3 SINE B2 0 216 116 4 667 384 324 5 59 chr15 10799509 10799696 -92695278 + MER53 DNA hAT 6 182 -11 4 667 369 0 0 0 chr15 10800070 10800111 -92694863 + (TC)n Simple_repeat Simple_repeat 1 41 0 4 667 414 0 0 0 chr15 10800111 10800156 -92694818 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 667 250 239 0 0 chr15 10800347 10800418 -92694556 + (TA)n Simple_repeat Simple_repeat 1 71 0 4 667 459 0 0 0 chr15 10801220 10801271 -92693703 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 667 297 0 0 0 chr15 10801274 10801307 -92693667 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 667 189 0 0 0 chr15 10801907 10801928 -92693046 + (TC)n Simple_repeat Simple_repeat 1 21 0 4 667 222 118 0 0 chr15 10802046 10802080 -92692894 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 4 667 212 59 0 29 chr15 10802341 10802376 -92692598 + (TTTTTA)n Simple_repeat Simple_repeat 1 34 0 4 667 1104 118 0 61 chr15 10802377 10802575 -92692399 - Lx4A LINE L1 -2 7056 6871 4 667 261 211 0 0 chr15 10804333 10804390 -92690584 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 667 252 0 0 0 chr15 10804502 10804530 -92690444 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 667 851 112 31 0 chr15 10804561 10804712 -92690262 - B2_Mm2 SINE B2 -47 169 1 4 667 731 294 59 39 chr15 10805047 10805302 -92689672 - MLT1A0 LTR MaLR -23 342 83 4 667 369 324 16 70 chr15 10805439 10805622 -92689352 + MLT1F1 LTR MaLR 1 173 -396 4 667 1116 266 66 40 chr15 10805622 10805868 -92689106 + RLTR11A2 LTR ERVK 1 248 -279 4 667 204 40 0 0 chr15 10805868 10805893 -92689081 + (GGA)n Simple_repeat Simple_repeat 3 27 0 4 667 1116 266 66 40 chr15 10805893 10806116 -92688858 + RLTR11A2 LTR ERVK 249 481 -46 4 667 782 272 125 22 chr15 10806181 10806500 -92688474 + MLT1F1 LTR MaLR 169 520 -49 4 667 303 93 0 0 chr15 10806958 10807001 -92687973 + (TTTTC)n Simple_repeat Simple_repeat 3 45 0 4 667 1174 54 0 39 chr15 10807001 10807155 -92687819 - B1_Mus1 SINE Alu 0 148 1 4 667 865 201 58 11 chr15 10807307 10807498 -92687476 - B3 SINE B2 -1 215 16 4 667 1257 239 113 20 chr15 10807530 10807885 -92687089 - MTD LTR MaLR -14 405 18 4 667 1411 155 52 117 chr15 10808523 10808866 -92686108 + ORR1A4 LTR MaLR 1 321 -8 4 667 294 138 138 75 chr15 10808919 10809013 -92685961 + RMER5 LTR ERV1 369 468 -66 4 667 2237 137 50 26 chr15 10809018 10809401 -92685573 + ORR1B1 LTR MaLR 1 392 -2 4 667 3390 33 8 0 chr15 10809404 10809797 -92685177 - MTA_Mm LTR MaLR 0 396 1 4 667 9128 49 3 0 chr15 10809797 10810892 -92684082 - MTA_Mm-int LTR MaLR 0 1098 1 4 667 3419 35 5 0 chr15 10810892 10811286 -92683688 - MTA_Mm LTR MaLR 0 396 1 4 667 455 335 104 95 chr15 10811368 10811790 -92683184 - MLT1A0-int LTR MaLR -417 992 567 4 667 360 0 0 0 chr15 10811971 10812011 -92682963 + (TTA)n Simple_repeat Simple_repeat 1 40 0 4 667 608 211 0 9 chr15 10812011 10812144 -92682830 - B1_Mur2 SINE Alu -13 136 12 4 667 233 243 369 0 chr15 10812254 10812357 -92682617 + ID_B1 SINE B4 42 182 -42 4 667 3146 65 2 0 chr15 10812423 10812820 -92682154 - L1_Mus1 LINE L1 -1 6566 6169 4 667 6121 75 38 2 chr15 10812820 10813934 -92681040 + L1_Mus1 LINE L1 5008 6144 -423 4 667 2263 190 35 132 chr15 10813934 10814601 -92680373 - RMER19C LTR ERVK -9 602 1 4 667 270 0 0 0 chr15 10814740 10814770 -92680204 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 667 422 311 166 22 chr15 10815027 10815340 -92679634 - LTR50 LTR ERVL -341 454 97 4 667 1397 154 102 7 chr15 10815415 10815709 -92679265 - MTB_Mm LTR MaLR 0 407 86 4 667 3393 25 10 5 chr15 10815725 10816127 -92678847 - L1Md_F3 LINE L1 -21 6563 6160 5 667 444 211 18 55 chr15 10816129 10816239 -92678735 - MTB_Mm LTR MaLR -301 106 1 4 667 1477 137 42 46 chr15 10816429 10816473 -92678501 - RMER6B LTR ERVK 0 461 425 5 667 2202 110 3 58 chr15 10816473 10816821 -92678153 + ORR1A4 LTR MaLR 1 329 0 5 667 1477 137 42 46 chr15 10816821 10817083 -92677891 - RMER6B LTR ERVK -37 424 156 5 667 403 174 0 0 chr15 10817082 10817151 -92677823 - MTB_Mm LTR MaLR -314 93 25 5 667 324 0 0 0 chr15 10817151 10817187 -92677787 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 667 425 324 138 49 chr15 10817563 10818114 -92676860 - MER97b DNA MER1_type? -272 781 182 5 667 441 0 0 0 chr15 10818441 10818490 -92676484 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 667 1420 92 222 23 chr15 10819535 10819837 -92675137 - RMER10B LTR ERVL -2 396 35 5 667 720 248 50 21 chr15 10819849 10820065 -92674909 - B3A SINE B2 -16 200 2 5 667 826 301 12 17 chr15 10821451 10821656 -92673318 + B4A SINE B4 2 205 -87 5 667 2847 65 28 0 chr15 10821656 10822011 -92672963 + RLTR8 LTR ERVK 1 365 0 5 667 826 301 12 17 chr15 10822011 10822045 -92672929 + B4A SINE B4 206 239 -53 5 667 3863 271 59 23 chr15 10822535 10822578 -92672396 + Lx7 LINE L1 6146 6186 -1510 5 667 2999 100 57 47 chr15 10822578 10823091 -92671883 - MURVY-LTR LTR ERV1 0 519 2 5 667 3863 271 59 23 chr15 10823091 10824088 -92670886 + Lx7 LINE L1 6187 7226 -470 5 667 515 16 16 0 chr15 10824088 10824152 -92670822 + (TTTC)n Simple_repeat Simple_repeat 1 65 0 5 667 3863 271 59 23 chr15 10824152 10824236 -92670738 + Lx7 LINE L1 7227 7311 -385 5 667 252 0 0 0 chr15 10824278 10824306 -92670668 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 667 324 0 0 0 chr15 10824306 10824341 -92670633 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 667 34 42 0 0 chr15 10824404 10824452 -92670522 + AT_rich Low_complexity Low_complexity 1 48 0 5 667 335 297 38 21 chr15 10826043 10826229 -92668745 - RMER15 LTR ERVL -48 527 339 5 667 250 169 31 0 chr15 10826343 10826408 -92668566 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 667 579 226 88 0 chr15 10826852 10826989 -92667985 - B1F SINE Alu 0 149 1 5 667 215 125 0 24 chr15 10827837 10827878 -92667096 + (TCCC)n Simple_repeat Simple_repeat 3 42 0 5 667 366 107 0 0 chr15 10827884 10827940 -92667034 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 667 236 278 41 72 chr15 10827964 10828061 -92666913 - B4A SINE B4 -129 163 70 5 667 30 27 0 0 chr15 10828511 10828548 -92666426 + AT_rich Low_complexity Low_complexity 1 37 0 5 667 367 329 34 0 chr15 10828592 10828738 -92666236 - ID_B1 SINE B4 -1 223 73 5 667 442 284 16 0 chr15 10829542 10829669 -92665305 + ID_B1 SINE B4 96 224 0 5 667 256 304 26 9 chr15 10829885 10830001 -92664973 + L3 LINE CR1 4114 4231 -258 5 667 2473 184 20 69 chr15 10830133 10830686 -92664288 + RLTR24 LTR ERV1 1 526 -3 5 667 215 308 39 0 chr15 10831755 10831833 -92663141 + L2a LINE L2 3346 3426 0 5 667 24 53 0 0 chr15 10832161 10832199 -92662775 + AT_rich Low_complexity Low_complexity 1 38 0 5 667 408 316 51 0 chr15 10832209 10832326 -92662648 - RSINE1 SINE B4 -40 125 3 5 667 201 0 23 93 chr15 10832911 10832954 -92662020 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 5 667 2703 190 158 23 chr15 10833008 10833655 -92661319 + RMER19A LTR ERVK 1 734 -3 5 667 423 0 0 0 chr15 10833817 10833864 -92661110 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 667 582 15 0 0 chr15 10833864 10833930 -92661044 + (GA)n Simple_repeat Simple_repeat 2 68 0 5 667 260 274 182 16 chr15 10834234 10834360 -92660614 - Lx8 LINE L1 -295 7178 7032 5 667 1416 239 62 14 chr15 10834718 10834941 -92660033 + ORR1D1 LTR MaLR 1 228 -146 5 667 249 83 0 0 chr15 10834941 10834977 -92659997 + (CCTG)n Simple_repeat Simple_repeat 3 38 0 5 667 1416 239 62 14 chr15 10834977 10835110 -92659864 + ORR1D1 LTR MaLR 229 373 -1 5 667 235 253 81 0 chr15 10835215 10835302 -92659672 - MLT1B LTR MaLR -4 386 293 5 667 544 278 46 41 chr15 10835332 10835550 -92659424 - MLT1B LTR MaLR -171 219 1 5 667 2180 120 43 17 chr15 10835761 10836109 -92658865 + RLTR15 LTR ERVK 3 359 0 5 667 546 341 60 36 chr15 10836492 10836827 -92658147 - MLT1A LTR MaLR -5 369 27 5 667 247 277 123 18 chr15 10836838 10836952 -92658022 + RLTR9E LTR ERVK 281 406 -3 5 667 1187 317 45 32 chr15 10837206 10837806 -92657168 + ETnERV2-int LTR ERVK 1790 2397 -3770 5 667 8497 283 36 26 chr15 10837825 10839966 -92655008 + ETnERV2-int LTR ERVK 2471 5417 -1989 5 667 3455 33 2 0 chr15 10839966 10840361 -92654613 + MTA_Mm LTR MaLR 1 396 0 5 667 8497 257 18 14 chr15 10840361 10841102 -92653872 + ETnERV2-int LTR ERVK 5418 6152 -1254 5 667 1058 320 45 44 chr15 10842224 10842839 -92652135 + RLTR6-int LTR ERV1 7049 7664 -114 5 667 401 224 47 111 chr15 10843324 10843495 -92651479 + RLTR9B LTR ERVK 278 437 0 5 667 277 262 46 55 chr15 10843633 10843742 -92651232 - MTE2b LTR MaLR -13 366 259 5 667 297 0 0 0 chr15 10844430 10844463 -92650511 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 5 667 3655 218 97 26 chr15 10844770 10845897 -92649077 + RMER12B LTR ERVK 1 1230 -342 5 667 324 102 0 0 chr15 10845897 10845946 -92649028 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 5 667 620 275 59 111 chr15 10845946 10846236 -92648738 + RMER12B LTR ERVK 1155 1404 0 5 667 322 267 105 46 chr15 10846323 10846476 -92648498 + MamGypLTR1c LTR Gypsy 639 800 -3 5 667 201 301 0 55 chr15 10847590 10847755 -92647219 + CT-rich Low_complexity Low_complexity 3 158 0 5 667 228 35 0 0 chr15 10847973 10848002 -92646972 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 5 667 214 308 25 13 chr15 10848167 10848241 -92646733 - PB1D10 SINE Alu -21 96 22 5 667 1623 226 50 20 chr15 10848241 10848648 -92646326 + MTD LTR MaLR 1 405 -14 5 667 2316 204 79 7 chr15 10848880 10849424 -92645550 + RMER19C LTR ERVK 3 585 -26 5 667 750 278 5 43 chr15 10850445 10850633 -92644341 - B3A SINE B2 -10 188 8 5 667 1025 173 61 0 chr15 10852477 10852674 -92642300 - ORR1C2 LTR MaLR -1 383 175 5 667 551 124 35 0 chr15 10852676 10852789 -92642185 + GA-rich Low_complexity Low_complexity 2 118 0 5 667 362 143 0 0 chr15 10852798 10852861 -92642113 - ORR1C2 LTR MaLR -285 99 37 5 667 342 182 0 0 chr15 10852861 10852927 -92642047 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 667 231 143 0 67 chr15 10852927 10852972 -92642002 - ORR1C2 LTR MaLR -342 42 1 5 667 224 257 0 91 chr15 10853935 10854012 -92640962 - PB1D7 SINE Alu -34 86 17 5 667 321 202 49 25 chr15 10854005 10854086 -92640888 - ID SINE ID -139 85 3 5 667 1834 161 63 14 chr15 10854161 10854508 -92640466 + MTC LTR MaLR 56 419 -2 5 667 1081 276 34 36 chr15 10855490 10855877 -92639097 - RLTR22_Mur LTR ERVK -1048 800 415 5 667 287 247 110 22 chr15 10855958 10856049 -92638925 + RLTR23 LTR ERV1 332 430 0 5 667 647 108 0 10 chr15 10856083 10856186 -92638788 + (TTCC)n Simple_repeat Simple_repeat 4 105 0 5 667 1648 237 69 17 chr15 10856617 10857038 -92637936 - Lx6 LINE L1 -8 7452 7010 5 667 328 327 12 42 chr15 10858053 10858219 -92636755 + RMER5 LTR ERV1 354 514 -20 5 667 1939 90 40 0 chr15 10859033 10859311 -92635663 - L1_Mus1 LINE L1 0 6567 6279 5 667 600 198 6 23 chr15 10859471 10859647 -92635327 + (CATA)n Simple_repeat Simple_repeat 4 176 0 5 667 611 281 33 67 chr15 10859664 10859807 -92635167 - MT2A LTR ERVL -71 462 320 5 667 1223 165 4 63 chr15 10859807 10860046 -92634928 + URR1B DNA MER1_type 1 225 0 5 667 611 281 33 67 chr15 10860046 10860112 -92634862 - MT2A LTR ERVL -214 319 260 5 667 7873 52 8 16 chr15 10860785 10861907 -92633067 - L1Md_F2 LINE L1 0 6582 5531 5 667 333 279 129 16 chr15 10861989 10862113 -92632861 + RSINE1 SINE B4 5 142 -23 5 667 456 285 0 0 chr15 10862238 10862417 -92632557 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 667 231 265 0 0 chr15 10862426 10862475 -92632499 + (CATG)n Simple_repeat Simple_repeat 3 51 0 5 667 296 161 0 16 chr15 10862507 10862570 -92632404 + GA-rich Low_complexity Low_complexity 3 64 0 5 667 624 304 117 15 chr15 10862792 10863126 -92631848 + MLT2D LTR ERVL 2 369 -45 5 667 236 53 26 0 chr15 10863568 10863606 -92631368 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 667 214 50 50 0 chr15 10863628 10863668 -92631306 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 667 196 53 53 0 chr15 10863690 10863728 -92631246 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 667 281 247 51 13 chr15 10864139 10864217 -92630757 + MLT1B LTR MaLR 3 83 -307 5 667 251 125 42 0 chr15 10864468 10864516 -92630458 + MLT1B LTR MaLR 129 178 -289 5 667 501 47 0 0 chr15 10865125 10865189 -92629785 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 667 637 239 94 58 chr15 10866873 10867064 -92627910 - B3A SINE B2 0 198 1 5 667 216 0 0 0 chr15 10867580 10867604 -92627370 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 667 914 64 96 0 chr15 10867604 10867729 -92627245 - B1_Mus1 SINE Alu -11 137 1 5 667 5869 132 26 22 chr15 10868325 10869269 -92625705 + Lx4A LINE L1 6109 7056 -2 5 667 22 0 0 0 chr15 10869345 10869367 -92625607 + AT_rich Low_complexity Low_complexity 1 22 0 5 667 322 338 7 7 chr15 10871015 10871158 -92623816 + MER2 DNA MER2_type 130 272 -73 5 667 334 223 30 50 chr15 10872657 10872685 -92622289 + B1_Mur1 SINE Alu 48 144 -5 5 667 393 183 0 0 chr15 10872685 10872756 -92622218 + ID_B1 SINE B4 149 219 -5 5 667 31 26 0 0 chr15 10873401 10873439 -92621535 + AT_rich Low_complexity Low_complexity 1 38 0 5 667 432 0 0 0 chr15 10873471 10873519 -92621455 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 667 414 0 0 0 chr15 10874025 10874071 -92620903 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 667 405 0 0 0 chr15 10874071 10874115 -92620859 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 667 943 274 32 64 chr15 10874472 10874619 -92620355 + MLT2D LTR ERVL 8 148 -266 5 667 1399 210 82 36 chr15 10874619 10874975 -92619999 + ORR1D1 LTR MaLR 3 374 0 5 667 943 274 32 64 chr15 10874975 10874997 -92619977 + MLT2D LTR ERVL 149 161 -253 5 667 777 280 52 110 chr15 10874997 10875398 -92619576 + MTE2a LTR MaLR 1 378 -1 5 667 943 274 32 64 chr15 10875398 10875570 -92619404 + MLT2D LTR ERVL 162 339 -75 5 667 632 316 90 50 chr15 10875576 10875953 -92619021 + MT2A LTR ERVL 1 392 -141 5 667 387 0 0 0 chr15 10875993 10876036 -92618938 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 667 327 25 0 0 chr15 10876036 10876075 -92618899 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 667 267 181 289 0 chr15 10876107 10876190 -92618784 - B4 SINE B4 -4 288 182 5 667 281 230 40 0 chr15 10876779 10876853 -92618121 + LTR50 LTR ERVL 719 795 0 6 667 1801 208 102 79 chr15 10878360 10878553 -92616421 - Lx7 LINE L1 0 7696 7495 6 667 189 107 0 0 chr15 10878553 10878581 -92616393 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 6 667 1801 208 102 79 chr15 10878581 10878929 -92616045 - Lx7 LINE L1 -202 7494 7144 6 83 1026 60 0 0 chr15 10878929 10879063 -92615911 + (TCCC)n Simple_repeat Simple_repeat 4 137 0 6 668 645 245 7 26 chr15 10879072 10879223 -92615751 - B1_Mur1 SINE Alu 0 149 2 6 668 575 256 56 5 chr15 10879289 10879485 -92615489 - L1MA5 LINE L1 -1 6299 6094 6 668 240 154 0 0 chr15 10879504 10879556 -92615418 + T-rich Low_complexity Low_complexity 1 52 0 6 668 598 291 17 23 chr15 10879631 10879807 -92615167 - MLT1C LTR MaLR -73 394 220 6 668 324 111 0 0 chr15 10884084 10884138 -92610836 + (TTCA)n Simple_repeat Simple_repeat 4 57 0 6 668 516 221 90 39 chr15 10885107 10885262 -92609712 + B4A SINE B4 130 292 0 6 668 280 237 0 0 chr15 10885303 10885362 -92609612 + (TCCG)n Simple_repeat Simple_repeat 2 60 0 6 668 378 266 121 0 chr15 10886962 10887086 -92607888 + L1MA8 LINE L1 6059 6197 -94 6 668 180 59 74 56 chr15 10888665 10888719 -92606255 + T-rich Low_complexity Low_complexity 3 57 0 6 668 1015 195 22 52 chr15 10888848 10889080 -92605894 - URR1B DNA MER1_type 0 225 1 6 668 22 0 0 0 chr15 10889375 10889397 -92605577 + AT_rich Low_complexity Low_complexity 1 22 0 6 668 22 0 0 0 chr15 10890023 10890045 -92604929 + AT_rich Low_complexity Low_complexity 1 22 0 6 668 1309 86 0 36 chr15 10890976 10891169 -92603805 - B2_Mm2 SINE B2 -8 187 2 6 668 3312 18 42 0 chr15 10891321 10891701 -92603273 - MTA_Mm LTR MaLR 0 396 1 6 668 5187 29 0 2 chr15 10891713 10892310 -92602664 - L1Md_F3 LINE L1 -1 6583 5988 6 668 334 329 73 47 chr15 10892310 10892610 -92602364 - Kanga2_a DNA Tc2 -534 354 47 6 668 30100 125 10 17 chr15 10892924 10897243 -92597731 + L1_Mus3 LINE L1 419 4734 -1149 6 668 198 0 0 0 chr15 10897243 10897265 -92597709 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 6 668 30100 103 12 8 chr15 10897265 10899185 -92595789 + L1_Mus3 LINE L1 4735 6637 -1 6 668 1158 278 121 43 chr15 10899340 10899903 -92595071 + Lx9 LINE L1 7030 7636 -8 6 668 22 0 0 0 chr15 10899908 10899930 -92595044 + AT_rich Low_complexity Low_complexity 1 22 0 6 668 254 244 22 79 chr15 10900722 10900811 -92594163 - B1F1 SINE Alu -64 85 2 6 668 508 306 0 40 chr15 10901098 10901248 -92593726 - RSINE1 SINE B4 -18 147 4 6 668 382 206 7 40 chr15 10901955 10902107 -92592867 + GA-rich Low_complexity Low_complexity 2 148 0 6 668 24 0 0 0 chr15 10902501 10902525 -92592449 + AT_rich Low_complexity Low_complexity 1 24 0 6 668 874 266 95 10 chr15 10902850 10903154 -92591820 + ORR1E LTR MaLR 1 330 -29 6 668 2058 282 66 44 chr15 10903154 10903859 -92591115 + ORR1E-int LTR MaLR 810 1530 -50 6 668 633 236 63 6 chr15 10903859 10904017 -92590957 + ORR1E LTR MaLR 4 170 -189 6 668 346 288 58 36 chr15 10905662 10905799 -92589175 - ORR1E LTR MaLR -3 376 237 6 668 208 156 0 0 chr15 10905830 10905862 -92589112 + (CTAGGG)n Simple_repeat Simple_repeat 2 33 0 6 668 652 208 8 8 chr15 10905909 10906040 -92588934 - ORR1E LTR MaLR -228 131 1 6 668 274 330 128 72 chr15 10906235 10906555 -92588419 - MLT1J-int LTR MaLR -440 947 610 6 668 3129 61 29 5 chr15 10906703 10907114 -92587860 - BGLII LTR ERVK 0 421 1 6 668 1629 186 80 17 chr15 10907354 10907715 -92587259 - ORR1C2 LTR MaLR 0 384 1 6 668 832 230 54 15 chr15 10909685 10909888 -92585086 + B3 SINE B2 1 211 -5 6 668 219 139 0 0 chr15 10909960 10909996 -92584978 + (TTG)n Simple_repeat Simple_repeat 1 36 0 6 668 631 227 8 0 chr15 10909997 10910125 -92584849 - ID_B1 SINE B4 -9 215 87 6 668 276 272 93 34 chr15 10911020 10911138 -92583836 - ID_B1 SINE B4 -32 192 68 6 668 185 132 26 0 chr15 10911472 10911510 -92583464 + (CGGGG)n Simple_repeat Simple_repeat 5 43 0 6 668 1781 154 26 42 chr15 10912670 10913055 -92581919 - RMER10B LTR ERVL -5 393 15 6 668 645 277 52 21 chr15 10913337 10913529 -92581445 - B3A SINE B2 0 198 1 6 668 180 111 0 0 chr15 10914251 10914278 -92580696 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 668 383 290 0 0 chr15 10914692 10914799 -92580175 - PB1D9 SINE Alu -12 108 2 6 668 407 240 115 8 chr15 10914895 10915025 -92579949 - RSINE1 SINE B4 -11 154 11 6 668 411 259 123 0 chr15 10915358 10915528 -92579446 - Tigger7 DNA MER2_type -24 2467 2277 6 668 1142 68 0 7 chr15 10916486 10916635 -92578339 - B1_Mus1 SINE Alu 0 148 1 6 668 491 212 150 7 chr15 10918022 10918044 -92576930 + B4A SINE B4 102 122 -170 6 668 378 0 0 0 chr15 10918044 10918086 -92576888 + (TGGGGG)n Simple_repeat Simple_repeat 1 42 0 6 668 491 212 150 7 chr15 10918086 10918210 -92576764 + B4A SINE B4 123 268 -24 6 668 312 245 154 36 chr15 10919326 10919436 -92575538 + B1F2 SINE Alu 1 123 -26 6 668 3507 23 10 0 chr15 10919463 10919855 -92575119 + MTA_Mm LTR MaLR 1 396 0 6 668 221 53 0 50 chr15 10920042 10920082 -92574892 + (CAAAAA)n Simple_repeat Simple_repeat 2 39 0 6 668 423 38 0 0 chr15 10920154 10920207 -92574767 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 668 396 0 0 0 chr15 10920207 10920250 -92574724 + (GA)n Simple_repeat Simple_repeat 2 45 0 6 668 965 264 153 39 chr15 10920250 10920687 -92574287 - Lx7 LINE L1 -391 7305 6819 6 668 1298 86 31 26 chr15 10921411 10921602 -92573372 + B2_Mm2 SINE B2 2 193 -2 6 668 246 171 152 38 chr15 10921895 10921974 -92573000 + MER97c DNA MER1_type? 264 351 -739 6 668 351 0 0 0 chr15 10922077 10922116 -92572858 + (T)n Simple_repeat Simple_repeat 1 39 0 6 668 356 315 15 0 chr15 10922116 10922246 -92572728 - L1M4 LINE L1 -1198 5446 5315 6 668 390 213 138 28 chr15 10922374 10922519 -92572455 - L1M4 LINE L1 -1379 5265 5105 6 668 192 77 0 0 chr15 10922535 10922561 -92572413 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 668 590 263 72 64 chr15 10922578 10922860 -92572114 - B4A SINE B4 -16 276 8 6 668 277 299 11 0 chr15 10922868 10922955 -92572019 - L1M4 LINE L1 -1535 5109 5022 6 668 207 0 0 0 chr15 10922968 10922991 -92571983 + (TTCC)n Simple_repeat Simple_repeat 3 25 0 6 668 282 278 161 9 chr15 10923044 10923262 -92571712 - L1M4 LINE L1 -5006 1640 1390 6 668 328 308 39 0 chr15 10923288 10923392 -92571582 - L1M4 LINE L1 -5626 916 809 6 668 582 54 0 0 chr15 10923643 10923717 -92571257 + (GA)n Simple_repeat Simple_repeat 2 75 0 6 668 201 74 0 0 chr15 10923719 10923746 -92571228 + (GGGGA)n Simple_repeat Simple_repeat 5 31 0 6 668 379 254 129 49 chr15 10923798 10924022 -92570952 - Tigger5 DNA MER2_type -25 2381 2140 6 668 24 53 0 0 chr15 10925304 10925342 -92569632 + AT_rich Low_complexity Low_complexity 1 38 0 6 668 283 301 176 20 chr15 10927048 10927292 -92567682 - ORR1E LTR MaLR -3 356 75 6 668 931 199 75 0 chr15 10927460 10927646 -92567328 + B3 SINE B2 2 201 -15 6 668 21 0 0 0 chr15 10927706 10927727 -92567247 + AT_rich Low_complexity Low_complexity 1 21 0 6 668 624 38 0 0 chr15 10927987 10928066 -92566908 + (TC)n Simple_repeat Simple_repeat 1 79 0 6 668 483 297 81 28 chr15 10928223 10928507 -92566467 - MER119 DNA MER1_type -35 548 250 6 668 1083 139 0 0 chr15 10928526 10928706 -92566268 + (TCC)n Simple_repeat Simple_repeat 1 180 0 6 668 341 225 0 11 chr15 10928706 10928796 -92566178 + CT-rich Low_complexity Low_complexity 2 90 0 6 668 378 0 0 0 chr15 10929255 10929297 -92565677 + (TC)n Simple_repeat Simple_repeat 2 43 0 6 668 605 89 13 58 chr15 10929297 10929452 -92565522 + (TA)n Simple_repeat Simple_repeat 2 149 0 6 668 204 97 0 0 chr15 10929657 10929688 -92565286 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 6 668 366 325 83 0 chr15 10929689 10929809 -92565165 - LTR33A LTR ERVL -358 162 33 6 668 194 379 81 0 chr15 10929853 10929940 -92565034 - L2b LINE L2 -10 3365 3272 6 668 489 47 0 0 chr15 10930244 10930308 -92564666 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 668 28 29 0 0 chr15 10931200 10931235 -92563739 + AT_rich Low_complexity Low_complexity 1 35 0 6 668 258 289 13 13 chr15 10931960 10932037 -92562937 + MER5A DNA MER1_type 68 144 -45 6 668 440 276 43 54 chr15 10932225 10932409 -92562565 - L1MB7 LINE L1 -51 6129 5948 6 668 228 325 0 0 chr15 10933097 10933174 -92561800 - MER5A DNA MER1_type -50 139 63 6 668 299 235 137 0 chr15 10934215 10934317 -92560657 - Lx8 LINE L1 -3 7470 7355 6 668 382 295 39 8 chr15 10934611 10934741 -92560233 - MLT1B LTR MaLR -46 344 211 6 668 387 0 0 0 chr15 10936041 10936084 -92558890 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 668 618 58 0 0 chr15 10936084 10936171 -92558803 + (CAGAGA)n Simple_repeat Simple_repeat 2 88 0 6 668 233 299 123 31 chr15 10937496 10937724 -92557250 - L1MA5A LINE L1 -53 6244 5996 6 668 315 0 0 0 chr15 10937908 10937943 -92557031 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 668 237 280 143 71 chr15 10938316 10938470 -92556504 - LTR16E2 LTR ERVL -112 456 292 6 668 222 330 2 7 chr15 10939918 10939949 -92555025 + B4A SINE B4 57 85 -207 6 668 252 312 39 0 chr15 10939949 10940026 -92554948 + PB1D7 SINE Alu 1 80 -40 6 668 288 233 0 0 chr15 10940048 10940108 -92554866 - MER82 DNA MER2_type -292 361 302 6 668 361 295 42 69 chr15 10940129 10940318 -92554656 - MER82 DNA MER2_type -463 190 7 6 668 317 333 57 0 chr15 10940784 10940907 -92554067 - B4A SINE B4 -155 137 8 6 668 180 269 39 0 chr15 10941999 10942051 -92552923 - MIR SINE MIR -168 94 41 6 668 219 36 0 0 chr15 10942181 10942209 -92552765 + (TC)n Simple_repeat Simple_repeat 1 28 0 6 668 384 296 48 0 chr15 10943107 10943232 -92551742 - MER3 DNA MER1_type -4 205 75 6 668 291 358 63 31 chr15 10944051 10944273 -92550701 - LTR16B LTR ERVL -8 455 227 6 668 338 251 179 49 chr15 10944758 10945081 -92549893 + L1M2 LINE L1 2330 2719 -3421 6 668 1195 242 0 0 chr15 10945089 10945333 -92549641 + Lx6 LINE L1 7078 7321 -139 6 668 771 152 0 0 chr15 10945333 10945511 -92549463 + CT-rich Low_complexity Low_complexity 2 179 0 7 668 334 150 25 0 chr15 10945526 10945606 -92549368 + Lx6 LINE L1 7353 7434 -26 6 668 349 254 33 17 chr15 10945663 10945783 -92549191 + L1M2 LINE L1 2810 2931 -3209 6 668 1141 287 24 17 chr15 10945814 10946229 -92548745 + L1M2 LINE L1 3537 3954 -2186 6 668 477 152 0 0 chr15 10946246 10946325 -92548649 + B3 SINE B2 35 113 -103 7 668 292 272 48 42 chr15 10946444 10946609 -92548365 + L1M2 LINE L1 4132 4297 -1843 6 668 1591 177 100 37 chr15 10946648 10946985 -92547989 + MTD LTR MaLR 1 362 -57 7 668 2006 175 47 50 chr15 10946985 10947407 -92547567 - MTC LTR MaLR 0 421 1 7 668 1591 177 100 37 chr15 10947407 10947450 -92547524 + MTD LTR MaLR 363 405 -14 7 668 1491 285 88 12 chr15 10947566 10948251 -92546723 + L1M2 LINE L1 4527 5263 -880 6 668 220 233 14 14 chr15 10948342 10948416 -92546558 + T-rich Low_complexity Low_complexity 2 75 0 7 668 383 148 43 0 chr15 10948416 10948531 -92546443 + GA-rich Low_complexity Low_complexity 2 121 0 7 668 401 278 9 9 chr15 10948724 10948840 -92546134 + B1_Mur2 SINE Alu 1 116 -33 7 668 610 221 39 0 chr15 10949804 10949931 -92545043 + ID_B1 SINE B4 92 223 -1 7 668 285 98 0 0 chr15 10950331 10950372 -92544602 + (ATG)n Simple_repeat Simple_repeat 2 42 0 7 668 751 72 321 7 chr15 10950443 10950583 -92544391 - B2_Mm2 SINE B2 -11 184 1 7 668 919 318 99 49 chr15 10950742 10951249 -92543725 - MLT1E2 LTR MaLR -49 578 47 7 668 255 250 36 0 chr15 10951625 10951709 -92543265 - MLT1E2 LTR MaLR -68 559 473 7 668 1689 200 37 45 chr15 10952396 10952778 -92542196 + RMER4B LTR ERVK 17 395 -190 7 668 573 137 33 41 chr15 10952791 10952913 -92542061 + RMER4B LTR ERVK 465 585 0 7 668 199 336 20 82 chr15 10954703 10954849 -92540125 - MIRb SINE MIR -31 237 101 7 668 234 0 0 0 chr15 10955722 10955748 -92539226 + (GGAA)n Simple_repeat Simple_repeat 1 26 0 7 668 203 189 0 19 chr15 10956361 10956415 -92538559 + GA-rich Low_complexity Low_complexity 3 55 0 7 668 482 363 80 4 chr15 10957124 10957387 -92537587 + Cheshire DNA MER1_type 2 284 -2136 7 668 245 320 49 16 chr15 10958633 10958761 -92536213 - MIR SINE MIR -103 173 34 7 668 299 338 53 71 chr15 10959424 10959593 -92535381 - MER115 DNA Tip100 -352 341 176 7 668 421 271 116 92 chr15 10959840 10960133 -92534841 - RMER20B LTR ERVK -210 417 118 7 668 27 29 0 0 chr15 10960430 10960464 -92534510 + AT_rich Low_complexity Low_complexity 1 34 0 7 668 1613 170 80 26 chr15 10960464 10960649 -92534325 + RMER17C LTR ERVK 3 188 -222 7 668 525 32 0 0 chr15 10960649 10960712 -92534262 + (TCTCTG)n Simple_repeat Simple_repeat 4 66 0 7 668 1613 170 80 26 chr15 10960712 10960913 -92534061 + RMER17C LTR ERVK 189 409 -1 7 668 1427 70 43 0 chr15 10961012 10961199 -92533775 - B2_Mm2 SINE B2 0 195 1 7 668 2026 174 41 10 chr15 10961782 10962193 -92532781 + Lx2B LINE L1 6570 6993 -7 7 668 719 78 0 8 chr15 10962453 10962570 -92532404 + (TC)n Simple_repeat Simple_repeat 1 116 0 7 668 192 77 0 0 chr15 10962570 10962595 -92532379 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 668 1886 208 58 10 chr15 10963510 10963909 -92531065 - MTC LTR MaLR 0 421 4 7 668 279 0 0 0 chr15 10964040 10964071 -92530903 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 7 668 243 122 98 39 chr15 10964443 10964494 -92530480 + L1M4c LINE L1 613 666 -5718 7 668 435 38 0 0 chr15 10971645 10971698 -92523276 + (CA)n Simple_repeat Simple_repeat 1 53 0 7 668 626 238 44 0 chr15 10972307 10972467 -92522507 - Lx8 LINE L1 -414 7059 6893 7 668 234 385 91 39 chr15 10972477 10972707 -92522267 + L2c LINE L2 3112 3353 -34 7 668 243 241 0 17 chr15 10973174 10973233 -92521741 - RSINE1 SINE B4 0 165 108 7 668 535 259 8 0 chr15 10973250 10973381 -92521593 - B3 SINE B2 -7 209 78 7 668 266 191 0 93 chr15 10973456 10973531 -92521443 - RSINE1 SINE B4 -69 96 29 7 668 445 279 100 84 chr15 10973885 10974363 -92520611 - L1ME1 LINE L1 -120 6059 5574 7 668 485 300 202 8 chr15 10974365 10974627 -92520347 + MLT1A0 LTR MaLR 1 313 -52 7 668 438 261 56 41 chr15 10974640 10974908 -92520066 - L1MEc LINE L1 -4797 1603 1332 7 668 293 185 58 64 chr15 10975043 10975199 -92519775 + (TATAA)n Simple_repeat Simple_repeat 1 155 0 7 668 271 248 225 58 chr15 10975201 10975561 -92519413 - L1MEc LINE L1 -5217 1183 764 7 668 321 47 0 0 chr15 10975562 10975605 -92519369 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 7 668 36983 65 1 13 chr15 10975610 10981767 -92513207 - L1Md_F2 LINE L1 0 6582 506 7 668 1191 124 51 6 chr15 10981848 10982026 -92512948 + B2_Mm2 SINE B2 4 189 -6 7 668 239 258 16 0 chr15 10982608 10982670 -92512304 - L1MEc LINE L1 -6153 247 185 7 668 237 159 0 0 chr15 10983392 10983436 -92511538 + T-rich Low_complexity Low_complexity 1 44 0 7 668 182 253 147 0 chr15 10983927 10984022 -92510952 - L2c LINE L2 -118 3269 3161 7 668 285 324 45 18 chr15 10984445 10984668 -92510306 + L1ME2 LINE L1 5757 5985 -179 7 668 207 100 0 0 chr15 10985680 10985710 -92509264 + (CATATA)n Simple_repeat Simple_repeat 1 30 0 7 668 299 313 181 29 chr15 10986127 10986686 -92508288 + L2a LINE L2 2772 3408 -18 7 668 622 313 79 50 chr15 10987120 10987662 -92507312 - L1MC4 LINE L1 -222 7820 7246 7 668 841 199 11 6 chr15 10987955 10988137 -92506837 + MTC LTR MaLR 1 183 -238 7 668 393 245 51 0 chr15 10988182 10988280 -92506694 - MTEb LTR MaLR -276 103 1 7 668 477 110 0 0 chr15 10988462 10988535 -92506439 + (GGA)n Simple_repeat Simple_repeat 3 75 0 7 668 1162 162 5 16 chr15 10988537 10988731 -92506243 + MTC LTR MaLR 197 388 -33 7 668 501 32 0 0 chr15 10988758 10988821 -92506153 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 668 270 56 0 0 chr15 10989463 10989499 -92505475 + (ATGGTG)n Simple_repeat Simple_repeat 1 36 0 7 668 1087 243 85 18 chr15 10989747 10990078 -92504896 + MTD LTR MaLR 1 353 -66 7 668 216 0 0 0 chr15 10990110 10990134 -92504840 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 7 668 353 298 48 0 chr15 10990496 10990620 -92504354 + MIR SINE MIR 94 223 -39 7 668 1404 90 109 0 chr15 10991930 10992141 -92502833 + L1Md_F2 LINE L1 6349 6582 0 7 668 329 117 17 0 chr15 10992177 10992237 -92502737 + (TG)n Simple_repeat Simple_repeat 1 61 0 7 668 450 0 0 0 chr15 10992237 10992286 -92502688 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 668 649 239 137 15 chr15 10992669 10992873 -92502101 + MLT1D LTR MaLR 249 477 -28 7 668 1224 67 12 12 chr15 10993271 10993832 -92501142 + (CA)n Simple_repeat Simple_repeat 1 561 0 7 668 395 19 0 0 chr15 10995424 10995478 -92499496 + B1_Mus2 SINE Alu 94 147 0 7 668 180 0 0 0 chr15 10995649 10995669 -92499305 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 7 668 198 0 0 0 chr15 10995972 10995994 -92498980 + (CG)n Simple_repeat Simple_repeat 2 23 0 7 668 396 88 0 0 chr15 10995994 10996050 -92498924 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 668 369 141 15 15 chr15 10996734 10996799 -92498175 + G-rich Low_complexity Low_complexity 4 68 0 7 668 555 167 42 18 chr15 10996802 10996967 -92498007 + GA-rich Low_complexity Low_complexity 2 170 0 7 668 264 236 82 14 chr15 10997332 10997405 -92497569 + ID4 SINE ID 2 79 -4 7 668 225 243 14 14 chr15 10997682 10997753 -92497221 - Tigger5 DNA MER2_type -45 2361 2291 7 668 333 317 17 0 chr15 10997773 10997893 -92497081 - Tigger5 DNA MER2_type -2191 215 94 7 668 353 355 120 11 chr15 10999062 10999253 -92495721 - B4 SINE B4 -80 212 1 7 668 950 162 6 0 chr15 10999662 10999841 -92495133 + CT-rich Low_complexity Low_complexity 1 180 0 7 668 333 0 0 0 chr15 10999936 10999973 -92495001 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 668 204 40 0 0 chr15 11002047 11002072 -92492902 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 1 668 371 298 85 0 chr15 11002141 11002282 -92492692 + MER58A DNA MER1_type 48 200 -24 2 668 332 200 0 16 chr15 11002594 11002655 -92492319 + ID4_ SINE ID 24 83 0 3 668 203 156 0 0 chr15 11002894 11002926 -92492048 + (TTG)n Simple_repeat Simple_repeat 1 32 0 4 668 505 159 7 14 chr15 11002927 11003067 -92491907 + CT-rich Low_complexity Low_complexity 2 140 0 5 668 687 164 12 12 chr15 11003086 11003240 -92491734 + CT-rich Low_complexity Low_complexity 14 168 0 5 668 978 144 0 0 chr15 11003240 11003420 -92491554 + (TTC)n Simple_repeat Simple_repeat 1 180 0 6 668 687 164 12 12 chr15 11003420 11003432 -92491542 + polypyrimidine Low_complexity Low_complexity 2 13 0 7 668 232 102 27 68 chr15 11003434 11003508 -92491466 + CT-rich Low_complexity Low_complexity 2 72 0 8 668 202 258 16 16 chr15 11004022 11004085 -92490889 - MER5B DNA MER1_type -83 95 33 9 668 1004 271 142 8 chr15 11004752 11005110 -92489864 + MTD LTR MaLR 1 406 -13 1 668 457 290 146 9 chr15 11006081 11006293 -92488681 - L1MD1 LINE L1 0 6242 6002 1 668 338 246 36 58 chr15 11006484 11006622 -92488352 - L1MD1 LINE L1 -1198 4948 4814 1 668 331 233 35 0 chr15 11006649 11006735 -92488239 - L1M2 LINE L1 -673 5618 5530 1 668 553 252 108 16 chr15 11006780 11007038 -92487936 - L1MD1 LINE L1 -1411 4735 4454 1 668 560 143 22 0 chr15 11007213 11007304 -92487670 - L1M3 LINE L1 -620 5671 5579 1 668 553 192 8 8 chr15 11007304 11007435 -92487539 + (TA)n Simple_repeat Simple_repeat 2 132 0 1 668 327 203 0 0 chr15 11007469 11007538 -92487436 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 668 405 285 72 64 chr15 11007557 11007905 -92487069 - L1M3 LINE L1 -745 5426 5061 1 668 6967 82 31 6 chr15 11008730 11009265 -92485709 - L1_Mus2 LINE L1 -1 6565 6018 1 668 3543 18 2 0 chr15 11009265 11009660 -92485314 + MTA_Mm LTR MaLR 1 396 0 1 83 7588 71 16 2 chr15 11009660 11010769 -92484205 - L1_Mus2 LINE L1 -549 6017 4897 1 669 381 312 21 31 chr15 11011462 11011654 -92483320 + L2a LINE L2 2491 2680 -739 1 669 399 234 198 64 chr15 11011667 11011854 -92483120 + MER20 DNA MER1_type 7 218 -1 1 669 204 349 0 67 chr15 11012117 11012206 -92482768 + L2a LINE L2 2992 3074 -352 1 669 222 37 0 0 chr15 11012384 11012411 -92482563 + (CG)n Simple_repeat Simple_repeat 1 27 0 1 669 369 0 0 0 chr15 11012411 11012451 -92482523 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 669 214 333 0 103 chr15 11012477 11012564 -92482410 - RSINE1 SINE B4 -38 127 50 2 669 1224 50 0 0 chr15 11013146 11013305 -92481669 + L1_Mus2 LINE L1 6408 6566 0 2 669 246 105 0 0 chr15 11013513 11013551 -92481423 + (GGA)n Simple_repeat Simple_repeat 3 40 0 2 669 492 152 23 49 chr15 11013552 11013907 -92481067 + (TG)n Simple_repeat Simple_repeat 1 345 0 2 669 431 217 50 8 chr15 11015769 11015890 -92479084 + MER5A1 DNA MER1_type 16 141 -25 2 669 632 349 28 11 chr15 11016433 11016717 -92478257 + B4A SINE B4 1 289 -3 2 669 474 83 0 0 chr15 11018427 11018499 -92476475 + (TCTG)n Simple_repeat Simple_repeat 1 72 0 2 669 183 289 135 0 chr15 11018825 11018877 -92476097 + MIR3 SINE MIR 117 175 -33 2 669 518 326 0 0 chr15 11019518 11019653 -92475321 + B3A SINE B2 16 150 -48 2 669 315 0 0 0 chr15 11019655 11019690 -92475284 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 669 21 0 0 0 chr15 11020179 11020200 -92474774 + AT_rich Low_complexity Low_complexity 1 21 0 3 669 618 242 0 0 chr15 11020465 11020593 -92474381 + B1_Mur1 SINE Alu 9 136 -13 3 669 546 57 0 0 chr15 11020594 11020664 -92474310 + (CAAAA)n Simple_repeat Simple_repeat 3 72 0 3 669 296 179 68 45 chr15 11020789 11020877 -92474097 + B3 SINE B2 127 216 0 3 669 6215 60 8 14 chr15 11022121 11023542 -92471432 - L1Md_F3 LINE L1 -6 6632 5223 3 669 983 93 50 0 chr15 11023775 11023915 -92471059 + B1_Mus1 SINE Alu 1 147 -1 3 669 421 32 32 0 chr15 11023915 11023978 -92470996 + (TA)n Simple_repeat Simple_repeat 1 65 0 3 669 1122 125 0 0 chr15 11024703 11024879 -92470095 + (TTCTC)n Simple_repeat Simple_repeat 5 180 0 3 669 305 100 20 0 chr15 11024881 11024931 -92470043 + (TCCCC)n Simple_repeat Simple_repeat 4 54 0 3 669 621 0 0 0 chr15 11024931 11025000 -92469974 + (TTTTC)n Simple_repeat Simple_repeat 3 71 0 4 669 311 321 141 30 chr15 11025623 11025893 -92469081 - L1MC4 LINE L1 -205 7837 7538 4 669 289 311 57 52 chr15 11025910 11026103 -92468871 - Lx8 LINE L1 -9 7464 7271 4 669 387 193 0 0 chr15 11026217 11026305 -92468669 + (TG)n Simple_repeat Simple_repeat 2 89 0 4 669 359 245 84 48 chr15 11026384 11026551 -92468423 - Lx8 LINE L1 -2 7471 7299 4 669 238 304 39 39 chr15 11026891 11027021 -92467953 - L1MC4 LINE L1 -542 7340 7211 4 669 505 294 114 33 chr15 11027120 11027391 -92467583 - L1MC4 LINE L1 -1063 6979 6687 4 669 3951 90 29 4 chr15 11029167 11029715 -92465259 - Lx LINE L1 -358 6296 5735 4 669 2082 117 22 13 chr15 11029704 11030015 -92464959 - Lx LINE L1 -634 5252 4939 4 669 519 251 0 0 chr15 11030194 11030369 -92464605 + (TG)n Simple_repeat Simple_repeat 2 176 0 4 669 410 242 53 0 chr15 11030370 11030465 -92464509 - B4 SINE B4 0 292 193 4 669 5065 123 75 21 chr15 11031944 11032768 -92462206 + L1_Mur1 LINE L1 4495 5366 -520 4 669 1702 56 13 13 chr15 11032768 11033002 -92461972 + L1_Mus3 LINE L1 6400 6633 -5 4 669 5065 123 75 21 chr15 11033002 11033032 -92461942 + L1_Mur1 LINE L1 5367 5394 -492 4 669 246 81 0 0 chr15 11033123 11033160 -92461814 + (GTTTG)n Simple_repeat Simple_repeat 1 37 0 5 669 1320 160 205 14 chr15 11034311 11034608 -92460366 - MTC LTR MaLR 0 421 68 5 669 286 204 131 37 chr15 11034629 11034736 -92460238 - Lx4B LINE L1 -4 7054 6938 5 669 539 107 12 14 chr15 11034738 11034835 -92460139 - MTC LTR MaLR -329 90 1 5 669 414 0 0 0 chr15 11034856 11034902 -92460072 + (TC)n Simple_repeat Simple_repeat 2 47 0 5 669 240 111 0 0 chr15 11034902 11034937 -92460037 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 669 323 343 57 24 chr15 11035600 11035890 -92459084 - MLT1E3 LTR MaLR -5 500 277 5 669 1412 54 65 0 chr15 11035983 11036168 -92458806 - L1Md_F2 LINE L1 -503 6079 5883 5 669 1010 37 8 0 chr15 11036223 11036357 -92458617 - B1_Mus1 SINE Alu 0 148 14 5 669 3631 69 13 0 chr15 11036357 11036822 -92458152 + L1_Mus1 LINE L1 6096 6566 -1 5 669 326 339 53 0 chr15 11036834 11037023 -92457951 - MLT1E3 LTR MaLR -425 199 1 5 669 768 335 25 0 chr15 11038101 11038376 -92456598 - B4A SINE B4 -9 283 2 5 669 6408 78 21 1 chr15 11038458 11039305 -92455669 - Lx3_Mus LINE L1 -12 6997 6134 6 669 1995 148 35 3 chr15 11039697 11040043 -92454931 + RLTR15 LTR ERVK 2 358 -1 6 669 554 355 52 30 chr15 11040080 11040539 -92454435 + Charlie20a DNA Charlie 114 582 -225 6 669 523 161 0 0 chr15 11040750 11040837 -92454137 + B1_Mur2 SINE Alu 62 148 -1 6 669 211 111 0 27 chr15 11041971 11042008 -92452966 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 6 669 867 186 8 4 chr15 11042008 11042246 -92452728 + CT-rich Low_complexity Low_complexity 1 239 0 6 669 323 294 10 0 chr15 11042249 11042351 -92452623 - PB1D7 SINE Alu -6 114 12 6 669 1063 217 29 5 chr15 11042590 11042794 -92452180 - B3 SINE B2 -7 209 1 6 669 339 248 0 0 chr15 11042807 11042928 -92452046 + (TG)n Simple_repeat Simple_repeat 2 122 0 6 669 414 255 215 0 chr15 11042931 11043080 -92451894 - B3A SINE B2 -16 182 2 6 669 2076 194 113 28 chr15 11043111 11043616 -92451358 - Lx4B LINE L1 -10 7048 6501 7 669 292 271 71 0 chr15 11045285 11045370 -92449604 - L1MA9 LINE L1 0 6312 6222 7 669 510 273 115 35 chr15 11045651 11045880 -92449094 + Lx7 LINE L1 7126 7361 -335 7 669 341 150 25 0 chr15 11045921 11046001 -92448973 + (TATG)n Simple_repeat Simple_repeat 1 82 0 7 669 371 239 27 13 chr15 11046011 11046154 -92448820 + Lx7 LINE L1 7563 7678 -18 7 669 378 0 0 0 chr15 11046615 11046657 -92448317 + (GA)n Simple_repeat Simple_repeat 1 42 0 7 669 500 106 18 46 chr15 11047439 11047548 -92447426 + CT-rich Low_complexity Low_complexity 3 108 0 7 669 428 292 1 3 chr15 11047551 11047655 -92447319 - PB1D10 SINE Alu -16 101 2 7 669 240 224 0 0 chr15 11048675 11048742 -92446232 + (CCCTAG)n Simple_repeat Simple_repeat 3 69 0 7 669 226 271 28 14 chr15 11049241 11049312 -92445662 + CT-rich Low_complexity Low_complexity 1 72 0 7 669 363 44 0 0 chr15 11049327 11049372 -92445602 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 669 750 285 90 19 chr15 11049380 11049648 -92445326 - B4A SINE B4 -1 291 5 8 669 300 257 14 0 chr15 11050104 11050178 -92444796 + CT-rich Low_complexity Low_complexity 1 75 0 8 669 530 264 131 30 chr15 11050189 11050388 -92444586 - ID_B1 SINE B4 -4 220 2 8 669 653 176 150 16 chr15 11050403 11050530 -92444444 - B1_Mur2 SINE Alu -1 148 5 8 669 1204 203 0 0 chr15 11050979 11051191 -92443783 + B3 SINE B2 2 213 -3 8 669 459 0 0 0 chr15 11051472 11051523 -92443451 + (TA)n Simple_repeat Simple_repeat 1 51 0 8 669 638 333 99 22 chr15 11051533 11051988 -92442986 - LTR82A LTR ERVL -160 712 223 8 669 21 0 0 0 chr15 11052853 11052874 -92442100 + GC_rich Low_complexity Low_complexity 1 21 0 8 669 225 0 0 0 chr15 11053440 11053465 -92441509 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 8 669 298 254 0 0 chr15 11054230 11054297 -92440677 + RSINE1 SINE B4 69 135 -30 8 669 1939 97 50 0 chr15 11055734 11056033 -92438941 - ORR1A2 LTR MaLR -8 319 6 9 669 360 43 0 0 chr15 11056675 11056721 -92438253 + (TC)n Simple_repeat Simple_repeat 1 46 0 9 669 363 274 76 33 chr15 11056727 11056870 -92438104 - B1F SINE Alu -10 139 2 9 669 531 284 124 11 chr15 11057725 11057910 -92437064 - B4A SINE B4 -85 207 2 9 669 411 162 0 0 chr15 11058047 11058127 -92436847 + (TA)n Simple_repeat Simple_repeat 2 81 0 9 669 410 291 53 0 chr15 11058490 11058641 -92436333 + MER5A1 DNA MER1_type 7 165 -1 9 669 513 47 0 0 chr15 11058748 11058812 -92436162 + (TG)n Simple_repeat Simple_repeat 2 65 0 9 669 978 224 28 5 chr15 11059653 11059864 -92435110 - B3 SINE B2 0 216 1 9 669 184 406 54 27 chr15 11059879 11060026 -92434948 + L2b LINE L2 3225 3375 0 9 669 2035 168 67 5 chr15 11060957 11061346 -92433628 + MTC LTR MaLR 1 413 -8 9 669 687 292 126 8 chr15 11061866 11062246 -92432728 - L1MA5 LINE L1 -6 6294 5870 1 669 203 352 46 9 chr15 11063024 11063133 -92431841 - L2a LINE L2 -18 3408 3296 1 669 1507 225 108 8 chr15 11064454 11064835 -92430139 + MTD LTR MaLR 1 419 0 1 669 475 392 19 8 chr15 11065116 11065381 -92429593 - Lx8 LINE L1 -118 7355 7088 1 669 310 298 98 29 chr15 11065442 11065615 -92429359 - MLT1D LTR MaLR -3 502 318 1 669 203 45 65 22 chr15 11066794 11066840 -92428134 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 669 614 230 6 154 chr15 11066987 11067268 -92427706 - Lx5 LINE L1 -4 7054 6815 1 669 396 0 0 0 chr15 11067287 11067331 -92427643 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 669 1401 259 98 38 chr15 11067331 11067829 -92427145 - Lx9 LINE L1 -159 7485 6958 1 669 216 306 120 0 chr15 11068891 11068999 -92425975 + L3 LINE CR1 4219 4339 -150 1 669 305 304 0 0 chr15 11069457 11069536 -92425438 + ID2 SINE ID 2 80 -3 1 669 351 308 134 5 chr15 11069810 11069996 -92424978 - MLT1D LTR MaLR -259 246 37 1 669 322 310 191 88 chr15 11070183 11070466 -92424508 + ORR1E LTR MaLR 1 312 -47 1 669 699 350 29 37 chr15 11070647 11071029 -92423945 + MTE2a LTR MaLR 1 379 0 1 669 625 191 6 11 chr15 11072978 11073158 -92421816 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 669 824 244 121 49 chr15 11073160 11073429 -92421545 - MTD LTR MaLR -13 406 109 1 669 3665 165 41 24 chr15 11073429 11073776 -92421198 - RMER6D LTR ERVK 0 720 374 1 669 228 67 0 0 chr15 11073776 11073806 -92421168 + (CACAT)n Simple_repeat Simple_repeat 1 30 0 1 669 3665 165 41 24 chr15 11073806 11073838 -92421136 - RMER6D LTR ERVK -347 373 337 1 669 243 0 0 0 chr15 11073838 11073865 -92421109 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1 669 1231 48 0 0 chr15 11073870 11074015 -92420959 - B1_Mus2 SINE Alu -2 145 1 1 669 3665 165 41 24 chr15 11074015 11074336 -92420638 - RMER6D LTR ERVK -386 334 1 1 669 824 270 152 40 chr15 11074336 11074403 -92420571 - MTD LTR MaLR -311 108 42 1 669 287 279 65 65 chr15 11074521 11074659 -92420315 - ORR1E LTR MaLR -221 138 1 1 669 23 0 0 0 chr15 11074871 11074894 -92420080 + AT_rich Low_complexity Low_complexity 1 23 0 1 669 490 244 52 0 chr15 11074933 11075048 -92419926 - B3A SINE B2 -77 121 1 1 669 234 370 112 21 chr15 11075509 11075697 -92419277 - MIRb SINE MIR -39 229 25 1 669 263 259 135 48 chr15 11076216 11076423 -92418551 + L1ME3A LINE L1 5944 6168 -5 1 669 367 236 110 31 chr15 11077764 11077891 -92417083 - MIRc SINE MIR -50 218 82 1 669 1563 148 38 100 chr15 11078069 11078408 -92416566 - ORR1B1 LTR MaLR -36 358 41 1 669 4909 147 37 35 chr15 11078415 11079302 -92415672 - ORR1B1-int LTR MaLR -323 1640 757 1 669 4569 152 69 43 chr15 11079302 11080231 -92414743 - RMER17B LTR ERVK -4 954 2 1 669 4909 147 37 35 chr15 11080231 11080335 -92414639 - ORR1B1-int LTR MaLR -1207 756 647 1 669 337 186 0 0 chr15 11080311 11080370 -92414604 - MT2B LTR ERVL -542 59 1 1 669 233 276 145 8 chr15 11080689 11080813 -92414161 - MIR SINE MIR -107 155 15 1 669 304 312 11 11 chr15 11080895 11080989 -92413985 - PB1D10 SINE Alu -23 94 1 1 669 237 200 0 0 chr15 11082502 11082552 -92412422 + Lx7 LINE L1 7630 7679 -17 1 669 576 257 144 12 chr15 11083547 11083720 -92411254 + B3 SINE B2 1 196 -20 1 669 189 0 0 0 chr15 11083722 11083743 -92411231 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 669 213 39 0 0 chr15 11083743 11083768 -92411206 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 669 230 56 28 0 chr15 11084063 11084099 -92410875 + (TTTTC)n Simple_repeat Simple_repeat 2 38 0 1 669 180 318 71 64 chr15 11084138 11084279 -92410695 - MIR3 SINE MIR -32 176 35 1 669 246 321 12 0 chr15 11085404 11085485 -92409489 - L2b LINE L2 0 3375 3294 1 669 531 31 0 0 chr15 11086068 11086133 -92408841 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 669 776 163 214 0 chr15 11086138 11086316 -92408658 + URR1A DNA MER1_type 5 220 -6 1 669 353 303 42 7 chr15 11086664 11086807 -92408167 - MLT2C1 LTR ERVL -188 209 62 1 669 269 89 22 0 chr15 11087596 11087641 -92407333 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1 669 486 0 0 0 chr15 11089522 11089576 -92405398 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 669 384 22 0 0 chr15 11089576 11089620 -92405354 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 669 414 0 0 0 chr15 11089744 11089790 -92405184 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 669 2798 51 14 8 chr15 11092523 11092876 -92402098 + L1_Mus1 LINE L1 6213 6567 0 1 669 366 271 30 8 chr15 11093135 11093269 -92401705 + (TATATG)n Simple_repeat Simple_repeat 2 138 0 1 669 1824 225 68 53 chr15 11093406 11093951 -92401023 - RLTR31_Mur LTR ERVK 0 553 1 1 669 6169 178 65 64 chr15 11093956 11095411 -92399563 - RMER3D-int LTR ERVK -5 2837 1382 1 669 198 103 0 0 chr15 11096455 11096484 -92398490 + (T)n Simple_repeat Simple_repeat 1 29 0 1 669 440 220 42 8 chr15 11097259 11097378 -92397596 - L1MB2 LINE L1 -83 6088 5966 1 669 8230 42 0 0 chr15 11097410 11098467 -92396507 - L1Md_T LINE L1 0 6582 5526 1 669 29 0 0 0 chr15 11099279 11099308 -92395666 + AT_rich Low_complexity Low_complexity 1 29 0 1 669 959 284 166 50 chr15 11099426 11099889 -92395085 - Lx8 LINE L1 -97 7376 6860 1 669 287 297 18 48 chr15 11100108 11100236 -92394738 - L1_Mur3 LINE L1 -213 5667 5534 1 669 1135 69 14 0 chr15 11100263 11100408 -92394566 - B1_Mm SINE Alu 0 147 1 1 669 650 291 19 1 chr15 11100409 11100648 -92394326 - L1_Mur3 LINE L1 -719 5581 5341 1 669 21 0 0 0 chr15 11100648 11100669 -92394305 + AT_rich Low_complexity Low_complexity 1 21 0 1 669 450 289 68 34 chr15 11100784 11101020 -92393954 - L1_Mur3 LINE L1 -548 5332 5089 1 669 1361 266 34 12 chr15 11101023 11101441 -92393533 - L1_Mur3 LINE L1 -1854 4026 3600 1 669 1180 180 104 70 chr15 11101848 11102147 -92392827 + ORR1C1 LTR MaLR 6 314 -64 1 669 7191 83 25 10 chr15 11102147 11103114 -92391860 + Lx LINE L1 5668 6648 -6 1 669 3250 58 5 2 chr15 11103124 11103523 -92391451 + MTB LTR MaLR 1 400 0 1 669 255 85 11 99 chr15 11104034 11104155 -92390819 + (CTGTG)n Simple_repeat Simple_repeat 1 110 0 1 669 336 244 0 16 chr15 11104158 11104341 -92390633 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 669 453 213 0 18 chr15 11104371 11104538 -92390436 + (TG)n Simple_repeat Simple_repeat 1 164 0 1 669 360 45 0 119 chr15 11104545 11104743 -92390231 + (CTGTG)n Simple_repeat Simple_repeat 1 174 0 1 669 216 0 0 0 chr15 11105123 11105147 -92389827 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 1 669 252 364 41 0 chr15 11105206 11105327 -92389647 - MIRb SINE MIR -71 197 72 1 669 324 0 0 0 chr15 11105700 11105736 -92389238 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 669 624 141 13 7 chr15 11106128 11106278 -92388696 + CT-rich Low_complexity Low_complexity 2 152 0 1 669 273 119 0 0 chr15 11106278 11106320 -92388654 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 669 1181 300 44 8 chr15 11106651 11107011 -92387963 - MTE2b LTR MaLR -5 374 2 1 669 347 278 103 0 chr15 11107447 11107573 -92387401 + MLT1A1 LTR MaLR 258 396 -12 1 669 503 287 82 31 chr15 11107606 11107951 -92387023 + MER57F LTR ERV1 49 435 -1 1 669 231 88 0 0 chr15 11108086 11108120 -92386854 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1 669 303 304 9 35 chr15 11109360 11109476 -92385498 + MIRb SINE MIR 39 151 -117 1 669 531 241 6 88 chr15 11109504 11109663 -92385311 - MER5A DNA MER1_type 0 189 44 1 669 234 62 0 0 chr15 11109663 11109695 -92385279 + (CTG)n Simple_repeat Simple_repeat 1 32 0 1 669 601 200 26 0 chr15 11110117 11110232 -92384742 - URR1A DNA MER1_type -108 118 1 1 669 1730 57 0 0 chr15 11110273 11110483 -92384491 - L1_Mus1 LINE L1 0 6567 6358 1 669 2581 60 3 0 chr15 11110483 11110797 -92384177 + L1_Mus1 LINE L1 6056 6370 -197 1 669 7365 111 11 3 chr15 11110815 11111825 -92383149 - Lx2 LINE L1 -1 6996 5979 1 669 1993 95 24 0 chr15 11111825 11112119 -92382855 + MusHAL1 LINE L1 163 463 -2249 1 669 677 179 32 85 chr15 11112128 11112162 -92382812 - Lx4B LINE L1 -3 7055 7022 1 669 3475 48 5 0 chr15 11112162 11112556 -92382418 + MTA_Mm LTR MaLR 1 396 0 1 669 9529 46 3 2 chr15 11112556 11113653 -92381321 + MTA_Mm-int LTR MaLR 1 1098 0 1 669 3329 68 5 0 chr15 11113653 11114047 -92380927 + MTA_Mm LTR MaLR 1 396 0 1 669 677 179 32 85 chr15 11114047 11114199 -92380775 - Lx4B LINE L1 -37 7021 6879 1 669 505 335 37 34 chr15 11114200 11114497 -92380477 - MER110 LTR ERV1 -103 388 91 1 669 955 291 79 41 chr15 11114752 11115171 -92379803 + Lx8 LINE L1 7029 7463 -10 1 669 22 0 0 0 chr15 11116493 11116515 -92378459 + AT_rich Low_complexity Low_complexity 1 22 0 1 669 261 237 0 0 chr15 11117134 11117193 -92377781 + (TTGG)n Simple_repeat Simple_repeat 1 59 0 1 669 487 270 137 6 chr15 11117196 11117371 -92377603 - ORR1E LTR MaLR 0 359 162 1 669 228 156 0 135 chr15 11117370 11117422 -92377552 - ORR1E LTR MaLR -329 45 1 1 669 6831 112 16 2 chr15 11117500 11118517 -92376457 + Lx LINE L1 5644 6647 -7 1 669 940 244 195 19 chr15 11118547 11118978 -92375996 + Lx9 LINE L1 7134 7640 -4 1 669 243 266 128 0 chr15 11119259 11119368 -92375606 - L1ME3A LINE L1 -191 5982 5860 1 669 192 77 0 0 chr15 11120140 11120166 -92374808 + (CTTA)n Simple_repeat Simple_repeat 1 26 0 1 669 822 244 90 15 chr15 11120608 11120808 -92374166 - B3 SINE B2 0 216 2 1 669 203 23 43 43 chr15 11121394 11121440 -92373534 + (TATAA)n Simple_repeat Simple_repeat 2 47 0 1 669 456 288 181 21 chr15 11123254 11123553 -92371421 - Tigger5 DNA MER2_type -3 2403 2064 1 669 1089 81 0 0 chr15 11123831 11123980 -92370994 + (TTC)n Simple_repeat Simple_repeat 1 149 0 1 669 4449 131 32 52 chr15 11123980 11124787 -92370187 - Lx3C LINE L1 -94 6882 6092 1 669 543 92 0 0 chr15 11125608 11125695 -92369279 + (TG)n Simple_repeat Simple_repeat 1 87 0 1 669 739 284 139 8 chr15 11125699 11125944 -92369030 - B4A SINE B4 -14 278 2 1 669 1117 265 35 23 chr15 11126013 11126357 -92368617 + Lx7 LINE L1 7037 7384 -312 1 669 194 387 25 57 chr15 11126518 11126677 -92368297 - MIRm SINE MIR -122 154 1 1 669 634 236 39 8 chr15 11127330 11127458 -92367516 - B1_Mus2 SINE Alu 0 147 16 1 669 198 200 88 35 chr15 11127736 11127793 -92367181 + L2a LINE L2 3127 3186 -240 1 669 1208 285 14 3 chr15 11127908 11128193 -92366781 - B4A SINE B4 -2 290 3 2 669 3701 190 49 11 chr15 11128591 11129347 -92365627 - Lx5 LINE L1 -457 6593 5809 2 669 856 139 40 7 chr15 11129326 11129478 -92365496 - Lx4B LINE L1 -657 6401 6245 2 669 2264 171 58 21 chr15 11129493 11129928 -92365046 + Lx5 LINE L1 6596 7046 -4 2 669 540 45 0 0 chr15 11130530 11130597 -92364377 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 2 669 678 260 144 45 chr15 11130636 11130990 -92363984 + L1MC4a LINE L1 6206 6594 -1288 2 669 249 33 0 0 chr15 11131022 11131052 -92363922 + (GA)n Simple_repeat Simple_repeat 1 30 0 2 669 318 50 0 0 chr15 11131301 11131341 -92363633 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 669 210 37 0 0 chr15 11131366 11131393 -92363581 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 669 279 165 26 5 chr15 11131411 11131490 -92363484 + L1MC4a LINE L1 6691 6766 -1116 2 669 544 322 128 41 chr15 11131545 11132086 -92362888 + L1MC4a LINE L1 6765 7352 -530 2 669 950 247 110 58 chr15 11132525 11133042 -92361932 + L1M3 LINE L1 5131 5679 -489 2 669 267 269 10 106 chr15 11133328 11133432 -92361542 + RLTR25A LTR ERVK 489 582 -521 2 669 629 143 0 0 chr15 11133366 11133457 -92361517 + B1_Mus2 SINE Alu 47 137 -10 2 669 326 42 21 0 chr15 11133457 11133505 -92361469 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 2 669 807 11 0 0 chr15 11133801 11133893 -92361081 + (CA)n Simple_repeat Simple_repeat 2 93 0 2 669 197 86 57 0 chr15 11134508 11134543 -92360431 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 2 669 336 102 0 0 chr15 11134543 11134592 -92360382 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 669 444 19 0 0 chr15 11135005 11135058 -92359916 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 669 382 263 69 7 chr15 11135296 11135455 -92359519 - L1MD1 LINE L1 -2 6357 6091 2 669 819 263 205 39 chr15 11135463 11136072 -92358902 - L1MD2 LINE L1 -216 6143 5434 2 669 276 30 0 0 chr15 11136077 11136110 -92358864 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 669 2891 136 21 18 chr15 11136143 11136654 -92358320 - RLTR11A LTR ERVK 0 528 16 2 669 441 0 0 0 chr15 11136782 11136831 -92358143 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 669 890 295 129 47 chr15 11137566 11138093 -92356881 - RMER15 LTR ERVL -5 570 1 2 669 574 327 20 0 chr15 11139044 11139194 -92355780 + RSINE1 SINE B4 3 155 -10 2 669 194 191 0 21 chr15 11139272 11139320 -92355654 + GA-rich Low_complexity Low_complexity 1 47 0 2 670 327 201 272 14 chr15 11141681 11141820 -92353154 + Lx3B LINE L1 6800 6974 -2 2 670 1326 73 0 0 chr15 11141844 11142132 -92352842 + (GGAAA)n Simple_repeat Simple_repeat 1 288 0 2 670 822 90 15 7 chr15 11142135 11142270 -92352704 + (GGAGA)n Simple_repeat Simple_repeat 3 138 0 2 670 194 91 30 0 chr15 11142605 11142638 -92352336 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 2 670 188 308 19 0 chr15 11143083 11143135 -92351839 + L3 LINE CR1 4243 4295 -194 2 670 2420 190 14 5 chr15 11143366 11143783 -92351191 + MTC LTR MaLR 1 421 0 2 670 231 291 84 99 chr15 11144292 11144483 -92350491 + MIRb SINE MIR 64 251 -17 2 670 584 77 11 0 chr15 11144519 11144610 -92350364 + (GA)n Simple_repeat Simple_repeat 1 92 0 2 670 241 273 0 0 chr15 11144622 11144677 -92350297 - ID4 SINE ID -23 60 6 2 670 265 311 64 28 chr15 11144688 11144797 -92350177 - PB1D10 SINE Alu -4 113 1 2 670 1238 96 105 21 chr15 11144858 11145049 -92349925 - L1_Mus2 LINE L1 0 6566 6360 2 670 225 391 33 0 chr15 11145585 11145677 -92349297 + PB1D7 SINE Alu 26 120 0 2 670 959 261 174 17 chr15 11146193 11146555 -92348419 - Lx9 LINE L1 -405 7239 6821 2 670 328 321 23 15 chr15 11146563 11146696 -92348278 + Lx9 LINE L1 7325 7458 -186 2 670 24 0 0 0 chr15 11147299 11147323 -92347651 + AT_rich Low_complexity Low_complexity 1 24 0 2 670 737 92 8 0 chr15 11147837 11147957 -92347017 + (TG)n Simple_repeat Simple_repeat 2 122 0 2 670 257 0 30 0 chr15 11148364 11148397 -92346577 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2 670 429 297 62 18 chr15 11148397 11148504 -92346470 - B1_Mur1 SINE Alu -5 144 32 2 670 546 58 35 0 chr15 11148524 11148611 -92346363 + (TCTA)n Simple_repeat Simple_repeat 1 90 0 2 670 258 396 18 30 chr15 11148628 11148797 -92346177 + L2a LINE L2 2597 2763 -656 2 670 365 370 138 37 chr15 11148983 11149412 -92345562 + L2a LINE L2 2954 3425 -1 2 670 367 249 70 12 chr15 11150126 11150236 -92344738 + B1F SINE Alu 1 119 -1 2 670 230 81 27 0 chr15 11150753 11150790 -92344184 + (TCTCCC)n Simple_repeat Simple_repeat 1 38 0 2 670 1243 246 92 58 chr15 11150873 11150905 -92344069 - Lx7 LINE L1 -334 7362 7326 2 670 279 0 0 0 chr15 11150905 11150936 -92344038 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 670 1243 246 92 58 chr15 11150936 11151283 -92343691 - Lx7 LINE L1 -371 7325 6971 2 670 28 0 0 0 chr15 11151286 11151314 -92343660 + AT_rich Low_complexity Low_complexity 1 28 0 2 670 217 318 0 0 chr15 11151389 11151452 -92343522 + BC1_Mm scRNA scRNA 17 79 -73 2 670 1257 54 7 0 chr15 11151769 11151916 -92343058 - B1_Mus1 SINE Alu 0 148 1 2 670 457 300 0 0 chr15 11152621 11152721 -92342253 - RSINE1 SINE B4 -36 129 30 2 670 480 214 126 0 chr15 11153892 11153995 -92340979 - PB1D9 SINE Alu -3 117 2 2 670 5759 160 22 28 chr15 11154167 11155410 -92339564 + L1Md_T LINE L1 99 1205 -5411 2 670 37204 32 0 0 chr15 11155416 11159834 -92335140 + L1Md_T LINE L1 1170 5586 -297 2 670 8577 54 0 0 chr15 11159834 11160830 -92334144 + L1Md_T LINE L1 5587 6582 0 2 670 206 167 24 0 chr15 11160864 11160906 -92334068 + T-rich Low_complexity Low_complexity 3 45 0 2 670 2224 301 73 34 chr15 11161191 11162135 -92332839 - Lx8 LINE L1 -223 7250 6270 2 670 507 95 0 0 chr15 11162136 11162210 -92332764 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 2 670 271 280 11 21 chr15 11162218 11162313 -92332661 - Lx8 LINE L1 -1208 6265 6172 2 670 221 182 0 18 chr15 11162315 11162371 -92332603 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 670 1133 50 0 48 chr15 11162605 11162751 -92332223 + B1_Mus2 SINE Alu 1 139 -8 2 670 243 0 0 0 chr15 11162751 11162778 -92332196 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 670 481 280 9 0 chr15 11162796 11162903 -92332071 + PB1D10 SINE Alu 1 108 -9 2 670 1553 71 9 5 chr15 11164366 11164579 -92330395 - L1_Mus3 LINE L1 -5 6633 6420 2 670 539 291 94 11 chr15 11164582 11164763 -92330211 - B3A SINE B2 0 198 3 2 670 2087 270 96 5 chr15 11164947 11165717 -92329257 - L1MA8 LINE L1 -29 6262 5423 2 670 307 286 78 39 chr15 11165745 11165847 -92329127 - B1F SINE Alu -22 127 22 2 670 955 297 49 43 chr15 11165964 11166517 -92328457 - L1MD LINE L1 -1222 4924 4369 2 670 243 336 54 8 chr15 11166724 11166853 -92328121 + MIRc SINE MIR 83 217 -51 2 670 2968 46 3 0 chr15 11167670 11168032 -92326942 + MTA_Mm LTR MaLR 1 363 -33 2 670 1989 107 9 51 chr15 11168032 11168368 -92326606 - RLTRETN_Mm LTR ERVK 0 322 1 2 670 301 26 0 0 chr15 11168368 11168406 -92326568 + MTA_Mm LTR MaLR 363 400 0 2 670 467 298 130 6 chr15 11169404 11169566 -92325408 - MER20 DNA MER1_type -6 213 32 2 670 490 285 29 7 chr15 11171574 11171712 -92323262 - B1F SINE Alu -4 145 5 2 670 462 266 29 0 chr15 11171742 11171881 -92323093 - Lx5 LINE L1 -4 7046 6904 2 670 668 205 0 0 chr15 11171891 11172008 -92322966 + Lx5 LINE L1 6632 6748 -302 2 670 1378 242 96 0 chr15 11172168 11172502 -92322472 + MTEa LTR MaLR 3 368 -11 2 670 276 100 0 0 chr15 11172502 11172542 -92322432 + (TAA)n Simple_repeat Simple_repeat 1 40 0 2 670 600 241 17 0 chr15 11172546 11172662 -92322312 + MTE2b LTR MaLR 252 369 -10 2 670 223 345 84 34 chr15 11173715 11173861 -92321113 + MIR3 SINE MIR 24 172 -36 2 670 183 80 0 0 chr15 11174689 11174714 -92320260 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 2 670 325 388 80 29 chr15 11174881 11175120 -92319854 - LTR16C LTR ERVL -172 317 67 2 670 180 0 0 0 chr15 11175349 11175369 -92319605 + (TC)n Simple_repeat Simple_repeat 1 20 0 2 670 488 379 13 30 chr15 11175429 11175731 -92319243 + L1MD1 LINE L1 287 583 -6050 2 670 257 75 0 24 chr15 11175816 11175857 -92319117 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2 670 5168 125 48 12 chr15 11175857 11176698 -92318276 - Lx4A LINE L1 -3 7055 6185 2 670 1028 200 24 14 chr15 11176755 11176963 -92318011 - B3 SINE B2 -6 210 1 2 670 268 290 74 67 chr15 11176970 11177269 -92317705 + L1MD1 LINE L1 4343 4643 -1894 2 670 297 346 9 0 chr15 11177410 11177517 -92317457 + MLT1C LTR MaLR 360 467 0 2 670 26 0 0 0 chr15 11177537 11177563 -92317411 + AT_rich Low_complexity Low_complexity 1 26 0 2 670 204 89 35 35 chr15 11177806 11177864 -92317110 + A-rich Low_complexity Low_complexity 2 59 0 2 670 628 299 81 65 chr15 11178208 11178763 -92316211 + L1MD1 LINE L1 5709 6272 -361 2 670 379 222 20 0 chr15 11178875 11178974 -92316000 + Lx9 LINE L1 7384 7484 -160 2 670 276 315 60 38 chr15 11179110 11179295 -92315679 + L1MD1 LINE L1 6428 6616 -17 2 670 241 138 16 49 chr15 11179300 11179361 -92315613 + (TTATA)n Simple_repeat Simple_repeat 5 63 0 2 670 524 306 71 39 chr15 11179744 11180026 -92314948 - Lx8 LINE L1 -24 7449 7159 2 670 398 146 42 0 chr15 11180058 11180154 -92314820 + (TA)n Simple_repeat Simple_repeat 1 100 0 2 670 913 78 23 8 chr15 11180160 11180290 -92314684 - B2_Mm2 SINE B2 -33 162 31 2 670 2469 316 61 16 chr15 11180303 11181399 -92313575 - Lx8 LINE L1 -317 7156 6011 2 670 301 256 86 0 chr15 11181474 11181591 -92313383 + Lx7 LINE L1 5704 5830 -1866 2 670 432 0 0 0 chr15 11182290 11182338 -92312636 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 670 260 310 0 0 chr15 11183106 11183177 -92311797 + ID4_ SINE ID 3 73 -10 2 670 756 254 143 0 chr15 11183260 11183449 -92311525 + ID_B1 SINE B4 1 216 -8 2 670 186 43 0 0 chr15 11184258 11184281 -92310693 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 670 632 253 122 90 chr15 11184284 11184562 -92310412 - B4A SINE B4 -4 288 2 2 670 195 327 180 22 chr15 11184591 11184813 -92310161 - MIRb SINE MIR -10 258 2 2 670 2170 114 9 64 chr15 11185658 11186003 -92308971 - ORR1A3 LTR MaLR 0 326 1 3 670 978 199 229 0 chr15 11186112 11186442 -92308532 + MTD LTR MaLR 13 418 -1 3 670 462 250 19 19 chr15 11187475 11187492 -92307482 - L1M2 LINE L1 -866 5277 5258 3 670 706 52 43 0 chr15 11187492 11187608 -92307366 + (TAGA)n Simple_repeat Simple_repeat 1 121 0 3 670 462 250 19 19 chr15 11187608 11187745 -92307229 - L1M2 LINE L1 -886 5257 5123 3 670 220 219 76 30 chr15 11190875 11190941 -92304033 + MIRb SINE MIR 22 90 -178 3 670 327 323 77 60 chr15 11191404 11191572 -92303402 - MIRb SINE MIR -58 210 40 3 670 708 262 0 0 chr15 11192360 11192501 -92302473 + B1_Mur2 SINE Alu 2 142 -7 3 670 30 97 0 0 chr15 11192693 11192786 -92302188 + AT_rich Low_complexity Low_complexity 1 93 0 3 670 1064 219 108 16 chr15 11193770 11194085 -92300889 - RLTR11A2 LTR ERVK 0 527 184 3 670 913 293 71 10 chr15 11194105 11194512 -92300462 - MYSERV-int LTR ERVK -1924 4626 4195 3 670 602 248 8 46 chr15 11194649 11194780 -92300194 - B1_Mur3 SINE Alu -6 143 18 3 670 245 281 30 97 chr15 11195622 11195756 -92299218 + RMER12 LTR ERVK 746 870 -452 3 670 556 259 30 0 chr15 11198609 11198740 -92296234 - B1_Mur1 SINE Alu -13 136 2 3 670 229 415 0 0 chr15 11199471 11199536 -92295438 + tRNA-Ala-GCG tRNA tRNA 2 66 -9 3 670 601 261 196 30 chr15 11200585 11200928 -92294046 - MTD LTR MaLR -14 405 6 3 670 1487 187 75 52 chr15 11201056 11201280 -92293694 - RMER17C LTR ERVK 0 410 184 3 670 678 58 0 0 chr15 11201280 11201367 -92293607 + (GA)n Simple_repeat Simple_repeat 1 87 0 3 670 1487 187 75 52 chr15 11201367 11201543 -92293431 - RMER17C LTR ERVK -227 183 1 3 670 24 0 0 0 chr15 11201666 11201690 -92293284 + AT_rich Low_complexity Low_complexity 1 24 0 3 670 320 276 338 7 chr15 11202902 11203041 -92291933 + MER2 DNA MER2_type 10 194 -151 3 670 1298 213 42 32 chr15 11203041 11203351 -92291623 - Lx6 LINE L1 -12 7448 7136 3 670 1124 64 9 9 chr15 11203356 11203578 -92291396 + (TAGA)n Simple_repeat Simple_repeat 1 222 0 3 670 2341 239 13 2 chr15 11203605 11204141 -92290833 - Lx6 LINE L1 -671 6789 6248 3 670 2183 159 40 10 chr15 11204135 11204610 -92290364 - Lx6 LINE L1 -1512 5948 5459 3 670 1514 194 67 40 chr15 11204612 11205319 -92289655 - L1_Mur3 LINE L1 -4126 1751 1010 3 670 288 0 0 0 chr15 11205338 11205370 -92289604 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 3 670 371 271 41 7 chr15 11205370 11205515 -92289459 - Lx4B LINE L1 -21 7037 6888 3 670 1278 157 65 0 chr15 11205510 11205771 -92289203 - Lx2B LINE L1 -386 6614 6337 3 670 1219 54 0 0 chr15 11205777 11205924 -92289050 + B1_Mm SINE Alu 1 147 0 3 670 711 304 88 21 chr15 11205935 11206769 -92288205 - L1_Mur3 LINE L1 -6727 1001 17 3 670 424 307 93 7 chr15 11206770 11206921 -92288053 + MER2 DNA MER2_type 181 344 -1 3 670 21 71 0 0 chr15 11207264 11207306 -92287668 + AT_rich Low_complexity Low_complexity 1 42 0 3 670 189 0 0 0 chr15 11210822 11210843 -92284131 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 670 340 276 0 0 chr15 11210878 11210954 -92284020 - B2_Mm2 SINE B2 -119 76 1 3 670 198 0 0 0 chr15 11211410 11211432 -92283542 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 670 375 121 0 0 chr15 11211432 11211490 -92283484 + (TA)n Simple_repeat Simple_repeat 1 58 0 3 670 329 177 41 10 chr15 11212879 11212976 -92281998 + Lx5 LINE L1 6948 7047 -3 3 670 554 41 0 14 chr15 11213215 11213289 -92281685 + (TCCCC)n Simple_repeat Simple_repeat 4 76 0 3 670 346 366 90 36 chr15 11214098 11214376 -92280598 - ORR1E LTR MaLR 0 359 67 3 670 384 22 0 0 chr15 11214459 11214504 -92280470 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 670 306 0 0 0 chr15 11214504 11214537 -92280437 + (GA)n Simple_repeat Simple_repeat 2 35 0 3 670 182 315 89 98 chr15 11214675 11214798 -92280176 - MIRm SINE MIR -148 128 7 3 670 778 269 118 48 chr15 11216115 11216385 -92278589 - B4A SINE B4 -1 291 3 3 670 667 216 83 83 chr15 11217356 11217548 -92277426 - B3A SINE B2 -2 196 5 3 670 27 29 0 0 chr15 11217562 11217596 -92277378 + AT_rich Low_complexity Low_complexity 1 34 0 3 670 381 22 0 0 chr15 11220373 11220419 -92274555 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 670 585 329 0 0 chr15 11220422 11220571 -92274403 - RSINE1 SINE B4 -13 152 4 3 670 463 326 76 34 chr15 11221404 11221718 -92273256 - MLT1G3 LTR MaLR -5 590 254 3 670 1520 248 49 16 chr15 11222516 11222967 -92272007 - Lx3C LINE L1 -4 6972 6507 3 670 453 76 0 0 chr15 11223645 11223711 -92271263 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 3 670 1207 68 0 0 chr15 11223715 11223863 -92271111 - B1_Mus1 SINE Alu 0 148 1 3 670 251 309 37 0 chr15 11223945 11224026 -92270948 + PB1D10 SINE Alu 2 85 -32 3 670 593 180 26 13 chr15 11224029 11224181 -92270793 + GA-rich Low_complexity Low_complexity 1 154 0 3 670 591 40 0 0 chr15 11224487 11224561 -92270413 + (TC)n Simple_repeat Simple_repeat 1 74 0 3 670 360 0 0 0 chr15 11224638 11224678 -92270296 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 670 635 37 12 0 chr15 11225367 11225449 -92269525 + (CCCCCT)n Simple_repeat Simple_repeat 6 88 0 3 670 291 85 0 0 chr15 11225451 11225498 -92269476 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 670 279 0 0 0 chr15 11225498 11225529 -92269445 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 670 894 326 79 8 chr15 11225923 11226316 -92268658 - MER31A LTR ERV1 -2 483 63 3 670 1083 251 110 6 chr15 11226344 11226672 -92268302 - MTD LTR MaLR -53 366 5 3 670 593 289 92 59 chr15 11226767 11227072 -92267902 - MLT1A0 LTR MaLR 0 365 51 3 670 1887 67 0 12 chr15 11227093 11227336 -92267638 - L1_Mus1 LINE L1 0 6567 6328 3 670 1082 88 0 0 chr15 11227383 11227520 -92267454 + B1_Mus1 SINE Alu 2 138 -10 3 670 186 43 0 0 chr15 11227520 11227543 -92267431 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 670 770 190 206 6 chr15 11227551 11227726 -92267248 - B3 SINE B2 -6 210 1 3 670 423 0 0 0 chr15 11228617 11228664 -92266310 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 670 329 58 19 0 chr15 11228980 11229032 -92265942 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 670 188 323 21 41 chr15 11229036 11229133 -92265841 - MIRb SINE MIR -55 213 119 3 670 1095 202 0 0 chr15 11229209 11229412 -92265562 - B3 SINE B2 -3 213 11 3 670 316 318 0 0 chr15 11229337 11229422 -92265552 - RSINE1 SINE B4 -79 86 2 3 670 180 243 70 14 chr15 11229432 11229503 -92265471 - L2b LINE L2 -27 3348 3274 3 670 693 230 58 19 chr15 11230730 11230885 -92264089 - RSINE1 SINE B4 0 165 5 3 670 21 36 0 0 chr15 11232218 11232246 -92262728 + AT_rich Low_complexity Low_complexity 1 28 0 3 670 363 121 0 0 chr15 11232420 11232478 -92262496 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 670 741 147 0 0 chr15 11232477 11232647 -92262327 + (TG)n Simple_repeat Simple_repeat 1 170 0 3 670 25 0 0 0 chr15 11232685 11232710 -92262264 + AT_rich Low_complexity Low_complexity 1 25 0 3 670 248 292 34 0 chr15 11233168 11233257 -92261717 + MIRb SINE MIR 176 267 -1 3 670 270 281 54 48 chr15 11233366 11233534 -92261440 + ORSL-2b DNA Tip100 1 169 -339 3 670 235 286 70 20 chr15 11233535 11233635 -92261339 - MIR SINE MIR -114 148 44 3 670 617 335 59 9 chr15 11233667 11234004 -92260970 + ORSL-2b DNA Tip100 154 507 -1 3 670 1542 215 110 0 chr15 11234133 11234468 -92260506 + ORR1D1 LTR MaLR 1 372 -2 3 670 508 313 104 59 chr15 11235296 11235740 -92259234 - MLT1C LTR MaLR -3 464 1 3 670 1375 180 59 63 chr15 11236639 11237083 -92257891 - RMER17C LTR ERVK -517 441 13 3 670 577 326 22 1 chr15 11237320 11237519 -92257455 + B3A SINE B2 4 203 -13 3 670 206 329 0 13 chr15 11237937 11238014 -92256960 - MIRb SINE MIR -72 196 121 3 670 321 68 0 0 chr15 11238021 11238065 -92256909 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 670 26 82 0 0 chr15 11241777 11241838 -92253136 + AT_rich Low_complexity Low_complexity 1 61 0 3 670 1496 55 0 24 chr15 11241871 11242077 -92252897 - L1Md_F2 LINE L1 -3 6579 6379 3 670 28 29 0 0 chr15 11243149 11243184 -92251790 + AT_rich Low_complexity Low_complexity 1 35 0 3 670 183 307 110 34 chr15 11245217 11245335 -92249639 - MIR SINE MIR -79 183 57 3 670 277 301 101 43 chr15 11245402 11245541 -92249433 - MLT1H LTR MaLR -198 351 205 3 670 209 185 0 36 chr15 11245893 11245949 -92249025 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 3 670 261 0 0 0 chr15 11245970 11245999 -92248975 + (TAGA)n Simple_repeat Simple_repeat 2 30 0 3 670 240 35 0 0 chr15 11246921 11246950 -92248024 + (TCCC)n Simple_repeat Simple_repeat 4 32 0 3 670 536 301 76 5 chr15 11247521 11247705 -92247269 + B3A SINE B2 1 197 -1 3 670 246 128 0 0 chr15 11247705 11247744 -92247230 + (CAA)n Simple_repeat Simple_repeat 1 39 0 3 670 218 281 128 26 chr15 11247820 11247937 -92247037 + B1F SINE Alu 19 147 -2 3 670 3809 52 41 22 chr15 11249371 11249878 -92245096 - L1_Mus1 LINE L1 -1 6566 6050 3 670 324 275 0 36 chr15 11249948 11250031 -92244943 + B1F1 SINE Alu 70 149 0 3 670 515 53 13 0 chr15 11250188 11250263 -92244711 + (TA)n Simple_repeat Simple_repeat 2 77 0 3 670 768 60 33 33 chr15 11252475 11252596 -92242378 - RMER4A LTR ERVK 0 466 346 3 670 1706 180 34 26 chr15 11252609 11252992 -92241982 - RMER4A LTR ERVK -75 391 6 3 670 210 287 101 65 chr15 11253360 11253498 -92241476 - MIR3 SINE MIR -45 163 21 3 670 942 254 71 24 chr15 11254509 11254804 -92240170 + MTE2a LTR MaLR 62 370 -9 3 670 250 316 0 37 chr15 11255107 11255189 -92239785 + PB1D10 SINE Alu 2 80 -37 3 670 1059 112 4 0 chr15 11255194 11255446 -92239528 + (GAAA)n Simple_repeat Simple_repeat 1 253 0 3 670 391 280 107 40 chr15 11255728 11255877 -92239097 + RSINE1 SINE B4 7 165 0 3 670 3203 63 5 0 chr15 11255997 11256395 -92238579 - MTB LTR MaLR 0 400 1 4 670 195 0 86 0 chr15 11257205 11257240 -92237734 + (TTG)n Simple_repeat Simple_repeat 2 39 0 4 670 232 297 132 25 chr15 11258280 11258401 -92236573 - MIRb SINE MIR -57 211 78 4 670 522 220 15 30 chr15 11259064 11259195 -92235779 + B1_Mur1 SINE Alu 11 139 -10 4 670 23 0 0 0 chr15 11260979 11261002 -92233972 + AT_rich Low_complexity Low_complexity 1 23 0 4 670 1121 196 30 0 chr15 11261005 11261204 -92233770 - B3 SINE B2 -11 205 1 4 670 1522 269 112 15 chr15 11262046 11262582 -92232392 - Lx9 LINE L1 -912 6732 6145 4 670 449 264 181 0 chr15 11262653 11262797 -92232177 - B3A SINE B2 -20 178 9 4 670 862 231 131 11 chr15 11263398 11263665 -92231309 + MTD LTR MaLR 121 419 0 4 670 1690 31 0 0 chr15 11264286 11264479 -92230495 + B2_Mm1a SINE B2 1 193 0 4 670 892 261 96 13 chr15 11265107 11265502 -92229472 + L1MB3 LINE L1 5714 6141 -42 4 670 478 200 18 35 chr15 11265509 11265623 -92229351 + PB1D10 SINE Alu 6 117 0 4 670 315 0 0 0 chr15 11265629 11265664 -92229310 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 670 691 148 0 15 chr15 11266639 11266776 -92228198 + (TA)n Simple_repeat Simple_repeat 2 136 0 4 670 833 184 98 0 chr15 11267112 11267275 -92227699 - Lx9 LINE L1 -370 7274 7096 4 670 1608 165 103 0 chr15 11267277 11267617 -92227357 + Lx9 LINE L1 7270 7644 0 4 670 679 69 20 0 chr15 11267621 11267723 -92227251 + (GAAA)n Simple_repeat Simple_repeat 3 106 0 4 670 372 133 0 0 chr15 11267739 11267799 -92227175 + (GGGGA)n Simple_repeat Simple_repeat 1 60 0 4 670 1591 191 48 8 chr15 11268522 11268876 -92226098 - Lx9 LINE L1 -7 7637 7270 4 670 246 334 10 0 chr15 11269072 11269164 -92225810 - ID2 SINE ID -55 97 1 4 670 2224 203 31 35 chr15 11270101 11270446 -92224528 - Lx9 LINE L1 -379 7265 6922 4 670 3518 23 2 0 chr15 11270446 11270841 -92224133 + MTA_Mm LTR MaLR 1 396 0 4 670 2224 203 31 35 chr15 11270841 11270975 -92223999 - Lx9 LINE L1 -723 6921 6788 4 670 1080 218 114 28 chr15 11270970 11271221 -92223753 + Lx9 LINE L1 7260 7518 -126 4 670 321 26 0 0 chr15 11271221 11271259 -92223715 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 4 670 1080 218 114 28 chr15 11271259 11271332 -92223642 + Lx9 LINE L1 7519 7611 -33 4 670 416 296 146 84 chr15 11271462 11271724 -92223250 - MLT1C LTR MaLR 0 467 187 4 670 819 0 0 0 chr15 11271724 11271815 -92223159 + (TCTCC)n Simple_repeat Simple_repeat 4 94 0 4 670 416 296 146 84 chr15 11271815 11271957 -92223017 - MLT1C LTR MaLR -281 186 39 4 671 1058 240 58 16 chr15 11272737 11272995 -92221979 + Lx6 LINE L1 7023 7291 -169 4 671 365 141 14 0 chr15 11273302 11273373 -92221601 + GA-rich Low_complexity Low_complexity 3 74 0 4 671 276 100 0 0 chr15 11274408 11274448 -92220526 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 671 450 0 0 0 chr15 11274453 11274503 -92220471 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 671 959 312 38 22 chr15 11274597 11274997 -92219977 - Lx8 LINE L1 -203 7270 6865 4 671 1451 71 14 5 chr15 11275007 11275218 -92219756 - L1_Mus3 LINE L1 0 6638 6426 4 671 408 71 0 0 chr15 11276719 11276775 -92218199 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 671 1742 137 92 32 chr15 11279201 11279547 -92215427 - ORR1B2 LTR MaLR 0 367 1 4 671 1147 67 18 0 chr15 11279978 11280143 -92214831 + (TTTC)n Simple_repeat Simple_repeat 3 170 0 4 671 360 0 0 0 chr15 11280143 11280183 -92214791 + (TTC)n Simple_repeat Simple_repeat 1 40 0 4 671 316 58 39 0 chr15 11280183 11280235 -92214739 - B1_Mm SINE Alu 0 147 94 4 671 215 341 0 35 chr15 11280238 11280323 -92214651 + L2b LINE L2 3103 3184 -191 4 671 403 324 7 7 chr15 11280352 11280489 -92214485 + MER20 DNA MER1_type 8 144 -75 4 671 287 274 60 38 chr15 11280779 11280912 -92214062 + Lx8 LINE L1 7332 7467 -6 4 671 1647 249 32 20 chr15 11281721 11282127 -92212847 + Lx8 LINE L1 6105 6515 -958 4 671 2291 53 0 0 chr15 11282164 11282463 -92212511 - RLTR13A2 LTR ERVK 0 958 660 4 671 1149 217 87 16 chr15 11282462 11282771 -92212203 - ORR1D2 LTR MaLR -37 333 3 4 671 659 288 48 83 chr15 11282771 11283006 -92211968 + Lx8 LINE L1 7128 7356 -117 4 671 471 35 0 0 chr15 11283006 11283063 -92211911 + (GA)n Simple_repeat Simple_repeat 2 58 0 4 671 659 288 48 83 chr15 11283063 11283141 -92211833 + Lx8 LINE L1 7357 7429 -44 4 671 403 298 0 0 chr15 11284490 11284594 -92210380 + PB1D7 SINE Alu 1 104 -16 4 671 369 0 0 0 chr15 11284595 11284636 -92210338 + (GGA)n Simple_repeat Simple_repeat 2 42 0 4 671 1010 301 79 41 chr15 11284636 11285228 -92209746 + MER67B LTR ERV1 31 546 -115 4 671 258 258 226 25 chr15 11285306 11285465 -92209509 - MLT1G LTR MaLR -138 453 263 4 671 1224 41 0 0 chr15 11286084 11286230 -92208744 + B1_Mus2 SINE Alu 1 146 -1 4 671 200 59 29 0 chr15 11286230 11286264 -92208710 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 4 671 432 0 0 0 chr15 11286295 11286343 -92208631 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 671 261 0 0 0 chr15 11286642 11286671 -92208303 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 671 841 330 40 59 chr15 11287686 11288111 -92206863 - MT2A LTR ERVL -116 417 1 4 671 261 0 0 0 chr15 11288659 11288688 -92206286 + (A)n Simple_repeat Simple_repeat 1 29 0 4 671 1636 215 14 41 chr15 11289261 11289625 -92205349 + Lx6 LINE L1 7107 7460 0 4 671 2549 253 213 11 chr15 11289895 11290716 -92204258 - RMER1A Other Other -14 1016 70 4 671 1407 228 217 18 chr15 11290696 11291191 -92203783 - RMER1B Other Other -473 593 1 4 671 259 296 126 7 chr15 11291503 11291646 -92203328 - MER89 LTR ERV1 -396 163 4 4 671 260 318 102 16 chr15 11291963 11292091 -92202883 + B1F SINE Alu 2 140 -9 4 671 459 342 7 0 chr15 11292095 11292241 -92202733 + RSINE1 SINE B4 2 148 -17 4 671 217 152 0 0 chr15 11293017 11293050 -92201924 + T-rich Low_complexity Low_complexity 1 33 0 4 671 279 0 0 0 chr15 11293751 11293782 -92201192 + (T)n Simple_repeat Simple_repeat 1 31 0 4 671 239 295 60 35 chr15 11293788 11293904 -92201070 + L2a LINE L2 3134 3252 -174 4 671 923 125 19 32 chr15 11294422 11294579 -92200395 + B2_Mm2 SINE B2 1 155 -40 4 671 282 56 0 0 chr15 11294579 11294615 -92200359 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 4 671 414 0 0 0 chr15 11294950 11294996 -92199978 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 671 270 0 0 0 chr15 11294996 11295025 -92199949 + (GA)n Simple_repeat Simple_repeat 1 30 0 4 671 834 200 70 11 chr15 11295906 11296093 -92198881 - B3A SINE B2 0 198 1 4 671 388 265 39 10 chr15 11297010 11297113 -92197861 + PB1D7 SINE Alu 13 118 -2 4 671 462 299 67 7 chr15 11297122 11297257 -92197717 + B1_Mur1 SINE Alu 1 143 -6 4 671 193 218 287 0 chr15 11297570 11297657 -92197317 + MIRm SINE MIR 43 154 -122 4 671 261 0 0 0 chr15 11297737 11297766 -92197208 + (TTA)n Simple_repeat Simple_repeat 3 31 0 4 671 240 320 13 0 chr15 11298100 11298175 -92196799 + ID4 SINE ID 3 78 -5 4 671 1155 217 180 73 chr15 11298738 11299150 -92195824 + MT2A LTR ERVL 6 461 -72 4 671 190 83 40 40 chr15 11299945 11299995 -92194979 + T-rich Low_complexity Low_complexity 2 51 0 4 671 425 298 39 59 chr15 11300311 11300514 -92194460 - RLTR25A LTR ERVK -900 203 5 4 671 272 227 14 57 chr15 11300519 11300589 -92194385 + Ricksha_c DNA MuDR 840 906 -1142 4 671 695 257 127 8 chr15 11301062 11301329 -92193645 + Lx8 LINE L1 7173 7471 -2 4 671 283 337 12 12 chr15 11302079 11302163 -92192811 + PB1D10 SINE Alu 1 84 -33 4 671 312 172 0 0 chr15 11302921 11302979 -92191995 + (TTCA)n Simple_repeat Simple_repeat 3 60 0 4 671 1368 249 71 15 chr15 11303201 11303596 -92191378 + MTD LTR MaLR 1 417 -2 4 671 5671 69 15 2 chr15 11303714 11304527 -92190447 + RLTR22_Mus LTR ERVK 1 823 -985 4 671 257 298 66 44 chr15 11304784 11304921 -92190053 + RMER12 LTR ERVK 1105 1244 -78 4 671 937 188 69 0 chr15 11305777 11305979 -92188995 + Lx9 LINE L1 7302 7517 -127 4 671 643 190 10 56 chr15 11305963 11306158 -92188816 + Lx9 LINE L1 7458 7643 -1 4 671 198 156 0 0 chr15 11306856 11306901 -92188073 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 4 671 422 18 18 0 chr15 11306903 11306958 -92188016 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 671 2840 47 6 11 chr15 11307639 11307987 -92186987 - ORR1A0 LTR MaLR 0 346 1 4 671 21 36 0 0 chr15 11308311 11308339 -92186635 + AT_rich Low_complexity Low_complexity 1 28 0 4 671 1789 171 75 8 chr15 11308539 11308899 -92186075 - ORR1C2 LTR MaLR 0 384 1 4 671 238 266 51 37 chr15 11311952 11312042 -92182932 - Cheshire DNA MER1_type -2139 281 190 4 671 1120 76 0 0 chr15 11312899 11313056 -92181918 + B2_Mm2 SINE B2 2 158 -37 4 671 186 43 0 0 chr15 11313057 11313080 -92181894 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 4 671 522 0 0 0 chr15 11314313 11314371 -92180603 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 671 1606 159 67 31 chr15 11314388 11314745 -92180229 + ORR1D1 LTR MaLR 5 374 0 4 671 368 214 165 48 chr15 11315438 11315541 -92179433 + B1_Mur2 SINE Alu 1 144 -5 4 671 319 298 37 26 chr15 11315843 11316052 -92178922 - RSINE1 SINE B4 -80 212 6 4 671 247 317 48 19 chr15 11316655 11316758 -92178216 + PB1D10 SINE Alu 5 110 -7 4 671 252 86 0 0 chr15 11317150 11317185 -92177789 + (TATATG)n Simple_repeat Simple_repeat 1 35 0 4 671 378 0 0 0 chr15 11318993 11319035 -92175939 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 671 602 231 72 39 chr15 11319111 11319291 -92175683 + B3 SINE B2 2 187 -29 4 671 519 248 0 8 chr15 11319793 11319915 -92175059 - B3A SINE B2 -72 126 6 4 671 418 299 88 0 chr15 11324476 11324623 -92170351 - ID_B1 SINE B4 -61 163 4 4 671 367 226 65 0 chr15 11325073 11325166 -92169808 - B1F1 SINE Alu -44 105 7 4 671 499 237 35 0 chr15 11325971 11326085 -92168889 - PB1D7 SINE Alu -2 118 1 5 671 225 0 0 0 chr15 11327362 11327387 -92167587 + (TCCC)n Simple_repeat Simple_repeat 1 25 0 5 671 1477 58 16 0 chr15 11327834 11328022 -92166952 + B2_Mm1a SINE B2 1 191 -2 5 671 326 304 87 0 chr15 11330026 11330141 -92164833 - B1F2 SINE Alu -20 129 5 5 671 289 103 16 65 chr15 11330199 11330261 -92164713 - PB1D9 SINE Alu -10 110 52 5 671 1368 181 91 26 chr15 11330328 11330607 -92164367 + L1_Mur3 LINE L1 4334 4620 -1260 5 671 288 0 0 0 chr15 11330607 11330639 -92164335 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 671 1368 181 91 26 chr15 11330639 11330710 -92164264 + L1_Mur3 LINE L1 4621 4706 -1174 5 671 2793 62 52 3 chr15 11330715 11331084 -92163890 + Lx3_Mus LINE L1 6230 6616 -393 5 671 5245 70 3 0 chr15 11331079 11331762 -92163212 - L1_Mur1 LINE L1 -746 5140 4456 5 671 502 176 33 98 chr15 11331815 11331998 -92162976 - L1_Mur3 LINE L1 -3777 2103 1933 5 671 2135 124 3 17 chr15 11331999 11332343 -92162631 + ORR1A1 LTR MaLR 1 339 -7 5 671 1439 147 0 0 chr15 11332345 11332576 -92162398 - L1_Mur3 LINE L1 -3943 1937 1707 5 671 1583 140 93 7 chr15 11332577 11332878 -92162096 + IAPEY3_LTR LTR ERVK 1 327 -5 5 671 2355 146 58 10 chr15 11332881 11333157 -92161817 - L1_Mur3 LINE L1 -4169 1711 1435 5 671 306 0 0 0 chr15 11333157 11333191 -92161783 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 671 3250 169 36 11 chr15 11333191 11333917 -92161057 - L1_Mur3 LINE L1 -4446 1434 679 5 671 285 282 43 37 chr15 11333903 11334065 -92160909 - L1_Mur3 LINE L1 -7168 560 398 5 671 1349 251 80 34 chr15 11334155 11334630 -92160344 + RMER5 LTR ERV1 33 529 -5 5 671 305 172 74 31 chr15 11334653 11334815 -92160159 + (TA)n Simple_repeat Simple_repeat 1 169 0 5 671 291 262 442 22 chr15 11334830 11335016 -92159958 - MLT2B4 LTR ERVL -36 520 257 5 671 2890 36 45 0 chr15 11335108 11335439 -92159535 + ORR1A1 LTR MaLR 1 346 0 5 671 919 267 4 17 chr15 11335609 11335845 -92159129 + RLTR28B LTR ERVL 105 337 -144 5 671 1398 148 52 33 chr15 11335845 11336117 -92158857 - ORR1B2 LTR MaLR -11 356 80 5 671 1187 129 136 134 chr15 11336117 11336347 -92158627 - RMER17C LTR ERVK 0 410 181 5 671 542 54 0 13 chr15 11336347 11336422 -92158552 + (GAA)n Simple_repeat Simple_repeat 3 76 0 5 671 1187 129 136 134 chr15 11336422 11336595 -92158379 - RMER17C LTR ERVK -230 180 6 5 671 287 331 74 40 chr15 11337079 11337227 -92157747 - MER58B DNA MER1_type -1 340 188 5 671 336 102 0 0 chr15 11337723 11337772 -92157202 + (CGTG)n Simple_repeat Simple_repeat 1 49 0 5 671 705 251 225 80 chr15 11337940 11338265 -92156709 + MTD LTR MaLR 1 372 -7 5 671 309 296 61 61 chr15 11338764 11338879 -92156095 + PB1D10 SINE Alu 3 117 0 5 671 1038 47 0 45 chr15 11339407 11339541 -92155433 + B1_Mm SINE Alu 1 128 -19 5 671 1253 73 0 6 chr15 11340029 11340208 -92154766 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 5 671 445 267 0 0 chr15 11340215 11340305 -92154669 - B1F1 SINE Alu -11 138 49 5 671 310 241 225 44 chr15 11340434 11340654 -92154320 + RMER20B LTR ERVK 132 388 -239 5 671 1922 163 56 3 chr15 11340850 11341207 -92153767 + RLTR14 LTR ERV1 7 382 0 5 671 230 0 33 0 chr15 11342905 11342935 -92152039 + (TC)n Simple_repeat Simple_repeat 2 32 0 5 671 201 211 0 0 chr15 11343835 11343887 -92151087 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 671 341 360 73 0 chr15 11343954 11344090 -92150884 - RSINE1 SINE B4 -1 164 19 5 671 380 63 32 0 chr15 11344237 11344300 -92150674 + (CAAAA)n Simple_repeat Simple_repeat 1 65 0 5 671 22 35 0 0 chr15 11344619 11344648 -92150326 + GC_rich Low_complexity Low_complexity 1 29 0 5 671 256 267 45 82 chr15 11346116 11346131 -92148843 + MT2B LTR ERVL 152 162 -439 5 671 463 246 79 0 chr15 11346131 11346245 -92148729 + B1F1 SINE Alu 1 123 -26 5 671 1168 55 0 33 chr15 11346532 11346682 -92148292 + B1_Mus2 SINE Alu 2 146 -1 5 671 1135 180 130 0 chr15 11346950 11347150 -92147824 + URR1A DNA MER1_type 1 226 0 5 671 1092 75 0 0 chr15 11348027 11348174 -92146800 + (TTCTCC)n Simple_repeat Simple_repeat 3 149 0 5 671 297 0 0 0 chr15 11348678 11348711 -92146263 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 671 316 330 0 0 chr15 11348715 11348815 -92146159 - Lx9 LINE L1 -187 7457 7358 5 671 1217 233 20 5 chr15 11349576 11349929 -92145045 - Lx5 LINE L1 -655 6805 6227 5 671 1485 289 60 36 chr15 11349925 11350474 -92144500 + Lx5 LINE L1 6488 7049 -1 5 671 204 172 15 45 chr15 11350486 11350553 -92144421 + (TTTAA)n Simple_repeat Simple_repeat 3 67 0 5 671 961 196 80 10 chr15 11350669 11350870 -92144104 + B3 SINE B2 2 216 0 5 671 402 294 160 0 chr15 11351269 11351388 -92143586 - B1F SINE Alu -1 148 11 5 671 334 232 190 10 chr15 11352705 11352805 -92142169 + PB1D7 SINE Alu 2 119 -1 5 671 5415 63 7 22 chr15 11353389 11354081 -92140893 - L1Md_F2 LINE L1 0 6582 5901 5 671 513 84 0 0 chr15 11354497 11354568 -92140406 + (TATG)n Simple_repeat Simple_repeat 2 72 0 5 671 394 271 67 7 chr15 11354608 11354750 -92140224 - B4 SINE B4 -129 163 8 5 671 309 227 143 83 chr15 11354983 11355199 -92139775 - Lx9 LINE L1 0 7644 7416 5 671 201 164 17 68 chr15 11355767 11355826 -92139148 + A-rich Low_complexity Low_complexity 3 58 0 5 671 333 47 0 0 chr15 11355924 11355967 -92139007 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 5 671 861 144 0 29 chr15 11356233 11356369 -92138605 + B1_Mus2 SINE Alu 3 134 -13 5 671 585 283 20 20 chr15 11357095 11357243 -92137731 - B1_Mur3 SINE Alu 0 149 2 5 671 252 86 0 0 chr15 11357390 11357425 -92137549 + (TC)n Simple_repeat Simple_repeat 2 36 0 5 671 2989 55 3 0 chr15 11357901 11358246 -92136728 - ORR1A1 LTR MaLR 0 346 1 5 671 26 0 0 0 chr15 11358299 11358325 -92136649 + AT_rich Low_complexity Low_complexity 1 26 0 5 671 1349 87 1 3 chr15 11358502 11359165 -92135809 + (TG)n Simple_repeat Simple_repeat 1 662 0 5 671 275 336 70 38 chr15 11359220 11359378 -92135596 - L1ME1 LINE L1 -61 6118 5956 5 671 206 336 137 25 chr15 11359658 11359942 -92135032 + L2 LINE L2 1159 1474 -1945 5 671 207 191 0 0 chr15 11359943 11359990 -92134984 + A-rich Low_complexity Low_complexity 1 47 0 5 671 398 359 111 6 chr15 11360126 11360451 -92134523 + L2 LINE L2 1604 1962 -1457 5 671 206 337 39 48 chr15 11361264 11361353 -92133621 + L2 LINE L2 2411 2502 -917 5 671 1826 181 129 9 chr15 11361353 11361694 -92133280 - ORR1C2 LTR MaLR 0 384 3 5 671 206 337 39 48 chr15 11361694 11361707 -92133267 + L2 LINE L2 2503 2512 -907 5 671 203 163 0 65 chr15 11361841 11361887 -92133087 + CT-rich Low_complexity Low_complexity 3 45 0 5 671 327 244 159 53 chr15 11361928 11362286 -92132688 + Charlie2a DNA MER1_type 1518 1937 -924 5 671 295 248 96 45 chr15 11362302 11362458 -92132516 + Charlie2a DNA MER1_type 1993 2156 -705 5 671 2365 286 59 14 chr15 11362540 11363303 -92131671 + Lx8 LINE L1 6461 7257 -216 5 671 227 289 143 20 chr15 11363772 11364016 -92130958 + Charlie2a DNA MER1_type 2586 2859 -2 5 671 230 159 0 0 chr15 11364361 11364405 -92130569 + A-rich Low_complexity Low_complexity 1 44 0 5 671 240 16 0 162 chr15 11365680 11365828 -92129146 + A-rich Low_complexity Low_complexity 1 124 0 5 671 333 0 0 0 chr15 11366584 11366621 -92128353 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 671 250 322 45 11 chr15 11366902 11366990 -92127984 - MIRb SINE MIR -176 92 2 5 671 287 345 41 16 chr15 11367477 11367598 -92127376 + MIRc SINE MIR 14 137 -131 5 671 243 0 0 0 chr15 11368251 11368278 -92126696 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 671 1169 72 0 0 chr15 11368278 11368417 -92126557 - B1_Mus1 SINE Alu -9 139 1 5 671 2337 95 0 3 chr15 11368673 11368979 -92125995 - Lx2 LINE L1 0 6997 6693 5 671 818 122 177 0 chr15 11368979 11369126 -92125848 + Lx2 LINE L1 6551 6723 -274 5 671 226 184 0 20 chr15 11369289 11369339 -92125635 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 5 671 792 194 204 0 chr15 11369732 11369918 -92125056 - URR1A DNA MER1_type -2 224 1 5 671 345 363 40 0 chr15 11369996 11370120 -92124854 - LTR33 LTR ERVL -340 175 47 5 671 184 205 25 25 chr15 11370451 11370491 -92124483 + MIRb SINE MIR 221 260 -8 5 671 306 0 0 0 chr15 11372231 11372265 -92122709 + (TC)n Simple_repeat Simple_repeat 1 34 0 5 671 180 0 0 0 chr15 11372265 11372284 -92122690 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 671 405 0 0 0 chr15 11372284 11372328 -92122646 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 671 327 331 43 22 chr15 11372446 11372585 -92122389 - B1F2 SINE Alu -1 148 7 5 671 2793 42 0 0 chr15 11372631 11372961 -92122013 + L1Md_F2 LINE L1 5257 5586 -297 5 671 8699 43 3 3 chr15 11372962 11373957 -92121017 + L1Md_F2 LINE L1 5588 6582 0 5 671 414 0 0 0 chr15 11374739 11374785 -92120189 + (TC)n Simple_repeat Simple_repeat 2 47 0 5 671 456 19 0 0 chr15 11374785 11374837 -92120137 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 671 384 233 186 0 chr15 11375945 11376074 -92118900 - MER53 DNA hAT -1 192 40 5 671 1076 218 0 49 chr15 11376721 11376967 -92118007 - Lx2B LINE L1 -13 6987 6754 5 671 1635 156 28 28 chr15 11376965 11377249 -92117725 - Lx2B LINE L1 -363 6637 6354 5 671 299 229 265 0 chr15 11377443 11377526 -92117448 + PB1D10 SINE Alu 11 115 -2 5 671 522 296 106 89 chr15 11377718 11378067 -92116907 - ORR1E LTR MaLR -4 355 1 5 671 852 343 7 11 chr15 11378092 11378363 -92116611 + B4 SINE B4 3 272 -20 5 671 1824 209 63 29 chr15 11378376 11378864 -92116110 + L1_Rod LINE L1 5063 5567 -280 5 671 2225 266 72 44 chr15 11378853 11378955 -92116019 - Lx8 LINE L1 -266 7207 7125 5 671 5468 58 11 1 chr15 11378955 11379606 -92115368 - L1_Mus1 LINE L1 0 6567 5911 5 671 2225 266 72 44 chr15 11379606 11380214 -92114760 - Lx8 LINE L1 -349 7124 6477 5 671 300 358 57 57 chr15 11381386 11381561 -92113413 - MLT1I LTR MaLR -15 396 222 5 671 394 307 17 17 chr15 11381914 11382030 -92112944 - ORR1E LTR MaLR -6 353 238 5 671 703 91 0 0 chr15 11382044 11382143 -92112831 - BC1_Mm scRNA scRNA -53 99 1 5 671 258 200 0 0 chr15 11382103 11382148 -92112826 - ZP3AR Satellite Satellite -24 188 144 5 671 236 322 124 107 chr15 11382155 11382257 -92112717 - ORR1E LTR MaLR -122 237 132 5 671 294 29 0 0 chr15 11382257 11382292 -92112682 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 5 671 236 322 124 107 chr15 11382292 11382422 -92112552 - ORR1E LTR MaLR -228 131 2 5 671 807 285 154 3 chr15 11382422 11382695 -92112279 - ORR1E-int LTR MaLR -53 1527 1210 5 671 1206 196 180 7 chr15 11382730 11382863 -92112111 - ORR1C1 LTR MaLR -46 332 169 5 671 288 0 0 0 chr15 11382863 11382895 -92112079 + (GA)n Simple_repeat Simple_repeat 1 32 0 6 671 1206 196 180 7 chr15 11382895 11383044 -92111930 - ORR1C1 LTR MaLR -210 168 2 5 671 1826 148 31 6 chr15 11383044 11383364 -92111610 - ORR1C1-int LTR MaLR 0 1509 1182 5 671 1288 218 116 21 chr15 11383499 11383827 -92111147 - ORR1D1 LTR MaLR -15 359 1 6 671 457 193 49 172 chr15 11384125 11384288 -92110686 - MTEb LTR MaLR -29 350 208 6 671 210 37 0 0 chr15 11385571 11385598 -92109376 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 671 209 362 35 28 chr15 11385934 11386079 -92108895 - MIRb SINE MIR -99 169 24 6 671 499 234 9 18 chr15 11386171 11386280 -92108694 - PB1D10 SINE Alu 0 117 10 6 671 360 0 0 0 chr15 11386428 11386468 -92108506 + (TC)n Simple_repeat Simple_repeat 2 41 0 6 671 429 20 0 0 chr15 11386468 11386517 -92108457 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 671 782 264 11 6 chr15 11386542 11386717 -92108257 + B3 SINE B2 31 206 -10 6 671 589 261 107 0 chr15 11388234 11388408 -92106566 - B3 SINE B2 0 198 7 6 671 262 133 44 0 chr15 11388709 11388754 -92106220 - L1_Mus2 LINE L1 -296 6270 6224 6 671 1547 58 0 55 chr15 11388754 11388971 -92106003 + L1_Mus1 LINE L1 6361 6565 -2 6 671 411 283 8 42 chr15 11389860 11389978 -92104996 + ID_B1 SINE B4 99 212 -12 6 671 557 248 51 0 chr15 11390717 11390854 -92104120 + RSINE1 SINE B4 3 146 -19 6 671 294 29 0 0 chr15 11390941 11390976 -92103998 + (CAA)n Simple_repeat Simple_repeat 2 36 0 6 671 2633 101 91 0 chr15 11391486 11391871 -92103103 + RLTR9B2 LTR ERVK 1 420 0 6 671 2617 61 47 0 chr15 11392015 11392375 -92102599 + RLTR10 LTR ERVK 12 388 -2 6 671 228 35 0 0 chr15 11392496 11392525 -92102449 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 6 671 226 300 59 111 chr15 11392572 11392707 -92102267 + LTR45C LTR ERV1 353 480 -59 6 671 744 296 0 0 chr15 11392719 11392969 -92102005 + Lx9 LINE L1 7204 7453 -191 6 671 528 304 24 63 chr15 11393151 11393358 -92101616 - RLTR33 LTR ERVK -33 645 447 6 671 180 97 0 0 chr15 11394705 11394736 -92100238 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 671 195 42 0 0 chr15 11395102 11395126 -92099848 + (A)n Simple_repeat Simple_repeat 1 24 0 6 671 546 67 0 0 chr15 11395819 11395894 -92099080 + (TC)n Simple_repeat Simple_repeat 1 75 0 6 671 494 43 14 0 chr15 11395894 11395962 -92099012 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 671 423 0 0 0 chr15 11397008 11397055 -92097919 + (TC)n Simple_repeat Simple_repeat 1 47 0 6 671 21 104 0 0 chr15 11397518 11397595 -92097379 + AT_rich Low_complexity Low_complexity 1 77 0 6 671 220 80 47 57 chr15 11397604 11397710 -92097264 + (TA)n Simple_repeat Simple_repeat 1 105 0 6 671 441 95 0 0 chr15 11397754 11397817 -92097157 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 671 190 211 0 0 chr15 11398612 11398650 -92096324 - L2a LINE L2 -26 3400 3363 6 671 215 0 0 62 chr15 11399777 11399809 -92095165 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 6 671 322 293 0 0 chr15 11400374 11400449 -92094525 - PB1D10 SINE Alu -22 95 21 6 671 1380 197 20 171 chr15 11401237 11401366 -92093608 + ORR1D1 LTR MaLR 1 129 -245 6 671 1312 95 16 10 chr15 11401366 11401558 -92093416 - B2_Mm2 SINE B2 -1 194 2 6 671 1380 197 20 171 chr15 11401558 11401868 -92093106 + ORR1D1 LTR MaLR 130 374 0 6 671 21 0 0 0 chr15 11401987 11402008 -92092966 + AT_rich Low_complexity Low_complexity 1 21 0 6 671 1153 90 11 0 chr15 11402439 11402616 -92092358 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 6 671 580 246 0 17 chr15 11402620 11402740 -92092234 - B1_Mur2 SINE Alu -5 144 27 6 671 237 235 0 38 chr15 11402740 11402793 -92092181 - B1_Mus1 SINE Alu -90 58 8 6 672 339 333 139 15 chr15 11403400 11403674 -92091300 - L2 LINE L2 -349 3070 2763 6 672 296 311 206 51 chr15 11403728 11404141 -92090833 - LTR78 LTR ERV1 -659 645 169 6 672 900 321 68 8 chr15 11405214 11405597 -92089377 + Lx8 LINE L1 6886 7291 -182 6 672 934 89 0 29 chr15 11405805 11405944 -92089030 + B1_Mur4 SINE Alu 15 149 -1 6 672 243 333 16 0 chr15 11405998 11406061 -92088913 + B4A SINE B4 82 145 -147 6 672 384 272 76 0 chr15 11406020 11406112 -92088862 + PB1D7 SINE Alu 20 118 -2 6 672 611 191 107 10 chr15 11406445 11406641 -92088333 - Lx9 LINE L1 -1 7643 7429 6 672 260 305 45 13 chr15 11406862 11407018 -92087956 - Lx8 LINE L1 -533 6940 6780 6 672 279 0 0 0 chr15 11407141 11407172 -92087802 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 672 336 341 187 19 chr15 11407173 11407382 -92087592 - L1MCa LINE L1 -6209 299 56 6 672 544 319 12 12 chr15 11408427 11408595 -92086379 - MER45A DNA Tip100 -8 170 3 6 672 357 259 40 107 chr15 11409421 11409646 -92085328 - L1MD1 LINE L1 -260 5982 5773 6 672 1369 52 0 14 chr15 11409684 11410196 -92084778 + (TGG)n Simple_repeat Simple_repeat 1 504 0 6 672 1174 33 0 43 chr15 11410222 11410410 -92084564 + (TGG)n Simple_repeat Simple_repeat 1 180 0 6 672 304 353 83 87 chr15 11410468 11410732 -92084242 - B4 SINE B4 -28 264 2 6 672 188 67 0 32 chr15 11410751 11410782 -92084192 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 6 672 1892 214 73 13 chr15 11410840 11411317 -92083657 - RMER1B Other Other -55 1011 506 6 672 598 276 37 27 chr15 11411319 11411542 -92083432 - L1MD1 LINE L1 -1034 5112 4887 6 672 180 0 0 0 chr15 11411542 11411562 -92083412 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 6 672 598 304 55 25 chr15 11411562 11411745 -92083229 - L1MD1 LINE L1 -1259 4887 4680 6 672 327 211 153 8 chr15 11412334 11412458 -92082516 - ORR1D2 LTR MaLR -4 366 225 6 672 235 158 0 0 chr15 11412461 11412499 -92082475 - ORR1D1 LTR MaLR -1 373 336 6 672 714 263 48 29 chr15 11412933 11413247 -92081727 - MER57D LTR ERV1 -2 409 1 6 672 1053 24 0 0 chr15 11413586 11413710 -92081264 + (TC)n Simple_repeat Simple_repeat 1 124 0 6 672 363 345 137 26 chr15 11414088 11414511 -92080463 + MARNA DNA Mariner 76 545 -41 6 672 1034 173 54 10 chr15 11414636 11414840 -92080134 + RMER4A LTR ERVK 1 213 -253 6 672 873 63 0 0 chr15 11415232 11415343 -92079631 + L1_Mus1 LINE L1 6295 6405 -162 6 672 936 34 0 16 chr15 11415343 11415464 -92079510 - B2_Mm2 SINE B2 -43 152 34 6 672 1153 42 0 0 chr15 11415464 11415608 -92079366 + L1_Mus1 LINE L1 6424 6567 0 6 672 1097 64 36 0 chr15 11415614 11415754 -92079220 + B1_Mus2 SINE Alu 1 145 -2 6 672 207 0 0 0 chr15 11415764 11415787 -92079187 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 6 672 204 40 0 0 chr15 11415840 11415865 -92079109 + (A)n Simple_repeat Simple_repeat 1 25 0 6 672 461 285 112 0 chr15 11416285 11416499 -92078475 - Lx9 LINE L1 -154 7490 7253 6 672 200 61 61 0 chr15 11418000 11418033 -92076941 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 6 672 506 307 38 26 chr15 11421108 11421372 -92073602 - Lx9 LINE L1 -106 7538 7272 6 672 488 368 32 19 chr15 11421801 11422017 -92072957 + MER2 DNA MER2_type 10 228 -117 6 672 435 364 0 15 chr15 11422147 11422281 -92072693 + MER2 DNA MER2_type 214 345 0 6 672 21 0 0 0 chr15 11422808 11422829 -92072145 + AT_rich Low_complexity Low_complexity 1 21 0 6 672 435 412 39 17 chr15 11422886 11423065 -92071909 + MLT1G1 LTR MaLR 114 299 -280 6 672 1413 208 93 9 chr15 11423065 11423409 -92071565 + ORR1D1 LTR MaLR 1 373 -1 6 672 435 383 81 85 chr15 11423409 11423526 -92071448 + MLT1G1 LTR MaLR 255 357 -191 6 672 788 289 66 33 chr15 11423733 11424095 -92070879 + Lx8 LINE L1 7099 7472 -1 6 672 6024 65 0 7 chr15 11424223 11424992 -92069982 - L1Md_F2 LINE L1 -3 6579 5816 6 672 5094 67 4 1 chr15 11424992 11425682 -92069292 + L1Md_F2 LINE L1 5108 5799 -84 6 672 228 329 47 64 chr15 11425759 11425774 -92069200 - B4A SINE B4 -56 236 167 6 672 294 321 65 14 chr15 11425774 11425913 -92069061 - B1F SINE Alu -3 146 1 6 672 228 329 47 64 chr15 11425913 11425931 -92069043 - B4A SINE B4 -56 166 68 6 672 624 306 43 32 chr15 11426512 11426698 -92068276 + B4A SINE B4 1 188 -104 6 672 200 324 105 28 chr15 11427906 11428087 -92066887 + L2 LINE L2 2786 2980 -439 6 672 10222 79 14 1 chr15 11428200 11430084 -92064890 - L1_Mus3 LINE L1 -5 6633 4738 6 672 340 19 58 0 chr15 11430084 11430136 -92064838 + (TTTTG)n Simple_repeat Simple_repeat 2 56 0 6 672 10222 77 16 2 chr15 11430136 11430436 -92064538 - L1_Mus3 LINE L1 -1146 4737 4418 6 672 453 36 0 0 chr15 11430926 11430981 -92063993 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 6 672 309 26 0 0 chr15 11431796 11431834 -92063140 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 672 545 290 47 141 chr15 11431834 11432131 -92062843 - B4A SINE B4 -23 269 1 6 672 696 268 79 95 chr15 11432155 11432597 -92062377 - Charlie2b DNA MER1_type -554 2228 1794 6 672 2061 206 72 4 chr15 11433202 11433690 -92061284 - Lx2B LINE L1 -3 6997 6477 6 672 2834 157 13 19 chr15 11433688 11434161 -92060813 + L1_Mur2 LINE L1 5124 5597 -280 6 672 3131 63 8 0 chr15 11434161 11434558 -92060416 + MTB LTR MaLR 1 400 0 6 672 2834 157 13 19 chr15 11434558 11434609 -92060365 + L1_Mur2 LINE L1 5598 5645 -232 6 672 22 0 0 0 chr15 11435601 11435623 -92059351 + AT_rich Low_complexity Low_complexity 1 22 0 6 672 411 21 0 0 chr15 11435871 11435919 -92059055 + (TC)n Simple_repeat Simple_repeat 2 49 0 6 672 591 273 93 40 chr15 11436057 11436305 -92058669 - Tigger5 DNA MER2_type -7 2399 2139 6 672 1089 267 78 37 chr15 11437170 11437542 -92057432 - MTEa LTR MaLR -6 373 1 6 672 3778 115 31 3 chr15 11438661 11439239 -92055735 - L1_Mus3 LINE L1 -7 6631 6038 6 672 4718 100 16 3 chr15 11439239 11440177 -92054797 + L1_Mus3 LINE L1 5095 6037 -599 6 672 2590 164 31 16 chr15 11440285 11440861 -92054113 - L1_Mur3 LINE L1 -2531 3349 2765 6 672 29 0 0 0 chr15 11441305 11441334 -92053640 + AT_rich Low_complexity Low_complexity 1 29 0 6 672 1430 243 15 25 chr15 11442246 11442643 -92052331 + Lx9 LINE L1 7083 7475 -169 6 672 204 149 0 0 chr15 11444733 11444780 -92050194 + (G)n Simple_repeat Simple_repeat 1 47 0 6 672 390 184 0 0 chr15 11445676 11445752 -92049222 + (TG)n Simple_repeat Simple_repeat 1 76 0 6 672 627 326 35 63 chr15 11445788 11446043 -92048931 + ORR1E LTR MaLR 1 248 -111 6 672 282 302 78 86 chr15 11446069 11446583 -92048391 - L1MEg LINE L1 -2289 3857 3348 6 672 261 344 3 0 chr15 11446675 11446778 -92048196 - PB1D10 SINE Alu -8 112 7 7 672 304 264 18 26 chr15 11447015 11447128 -92047846 - L1MEg LINE L1 -4725 1517 1406 6 672 894 182 190 16 chr15 11447134 11447318 -92047656 + B3 SINE B2 1 216 0 7 672 231 387 47 24 chr15 11448301 11448428 -92046546 + L2b LINE L2 3244 3373 -2 7 672 759 11 0 0 chr15 11449415 11449503 -92045471 + (TTC)n Simple_repeat Simple_repeat 3 90 0 7 672 890 300 35 24 chr15 11449702 11449989 -92044985 + B4 SINE B4 1 290 -2 7 672 30 0 0 0 chr15 11450272 11450302 -92044672 + AT_rich Low_complexity Low_complexity 1 30 0 7 672 377 303 110 39 chr15 11450327 11450581 -92044393 - LTR73 LTR ERV1 -101 471 200 7 672 374 287 62 8 chr15 11450981 11451111 -92043863 + MER57A-int LTR ERV1 5291 5427 -760 7 672 434 18 0 18 chr15 11451121 11451177 -92043797 + (TC)n Simple_repeat Simple_repeat 2 56 0 7 672 1935 129 120 28 chr15 11451188 11451547 -92043427 - RLTR9D LTR ERVK 0 403 12 7 672 519 69 14 0 chr15 11451624 11451696 -92043278 - B2_Mm1t SINE B2 -14 179 107 7 672 542 15 15 0 chr15 11451745 11451812 -92043162 + (TC)n Simple_repeat Simple_repeat 1 68 0 7 672 231 242 68 27 chr15 11452257 11452349 -92042625 + L1M1 LINE L1 5692 5793 -507 7 672 528 16 0 0 chr15 11452349 11452410 -92042564 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 672 229 253 112 43 chr15 11452410 11452478 -92042496 + L1M1 LINE L1 5794 5863 -437 7 672 257 247 0 120 chr15 11453033 11453125 -92041849 + L2c LINE L2 3299 3379 -8 7 672 306 366 54 60 chr15 11453134 11453451 -92041523 - L2a LINE L2 -6 3420 3106 7 672 23 33 0 0 chr15 11454595 11454625 -92040349 + AT_rich Low_complexity Low_complexity 1 30 0 7 672 357 138 0 0 chr15 11454755 11454835 -92040139 + (GA)n Simple_repeat Simple_repeat 1 80 0 7 672 1123 295 82 46 chr15 11454843 11455365 -92039609 - Lx9 LINE L1 -203 7441 6901 7 672 200 316 98 39 chr15 11455569 11455671 -92039303 + MIRm SINE MIR 56 163 -113 7 672 666 221 72 72 chr15 11455681 11455876 -92039098 + B3A SINE B2 2 196 -2 7 672 309 238 0 35 chr15 11456380 11456467 -92038507 + L1MC4 LINE L1 7507 7590 -452 7 672 634 300 186 0 chr15 11457332 11457569 -92037405 + B4A SINE B4 12 292 0 7 672 1298 11 0 37 chr15 11457630 11457817 -92037157 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 672 2323 194 110 0 chr15 11457849 11458314 -92036660 + RMER15 LTR ERVL 1 516 -59 7 672 243 241 0 0 chr15 11458597 11458651 -92036323 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 672 554 288 101 30 chr15 11458656 11458824 -92036150 - B4 SINE B4 -3 289 110 7 672 1096 162 40 108 chr15 11458828 11459105 -92035869 + Lx4B LINE L1 6799 7056 -2 7 672 201 68 22 43 chr15 11459156 11459202 -92035772 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 7 672 180 0 0 0 chr15 11459203 11459223 -92035751 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 7 672 245 258 76 0 chr15 11459227 11459293 -92035681 - B4A SINE B4 -213 79 9 7 672 189 0 0 0 chr15 11464186 11464207 -92030767 + (T)n Simple_repeat Simple_repeat 1 21 0 7 672 2211 181 81 38 chr15 11464207 11464781 -92030193 - RLTR31_Mm LTR ERVK -20 564 1 7 672 1494 58 3 0 chr15 11465494 11465822 -92029152 + (TTC)n Simple_repeat Simple_repeat 1 328 0 7 672 185 352 128 9 chr15 11466649 11466758 -92028216 + MIR SINE MIR 25 146 -62 7 672 555 314 37 25 chr15 11466772 11466935 -92028039 + RSINE1 SINE B4 1 165 0 7 672 784 62 20 0 chr15 11467163 11467283 -92027691 - B1_Mus1 SINE Alu -10 138 1 7 672 282 291 99 33 chr15 11467187 11467308 -92027666 - MT2B LTR ERVL -332 269 141 7 672 297 0 0 0 chr15 11467465 11467498 -92027476 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 672 1352 262 94 21 chr15 11467694 11468136 -92026838 + Lx8 LINE L1 6691 7292 -352 7 672 210 143 0 0 chr15 11468203 11468238 -92026736 + (TA)n Simple_repeat Simple_repeat 2 36 0 7 672 1019 266 96 30 chr15 11469270 11469635 -92025339 + MLT1B LTR MaLR 1 389 -1 7 672 305 283 198 58 chr15 11470561 11470826 -92024148 + MLT1E1 LTR MaLR 303 645 -35 7 672 333 0 0 0 chr15 11470871 11470908 -92024066 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 672 256 77 39 0 chr15 11473849 11473901 -92021073 + (TTTG)n Simple_repeat Simple_repeat 2 55 0 7 672 306 0 0 0 chr15 11473988 11474022 -92020952 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 7 672 736 309 142 29 chr15 11474359 11474803 -92020171 - RMER5 LTR ERV1 -17 517 24 7 672 4229 59 11 0 chr15 11475171 11475836 -92019138 - L1_Mus1 LINE L1 -579 5988 5312 7 672 18088 113 43 3 chr15 11475831 11477982 -92016992 - L1_Mus1 LINE L1 -1752 4131 1905 7 672 4608 50 11 25 chr15 11477982 11478552 -92016422 - L1Md_F3 LINE L1 -7 6577 6016 7 672 18088 172 56 81 chr15 11478552 11480220 -92014754 - L1_Mus1 LINE L1 -3979 1904 217 7 672 7609 83 22 0 chr15 11480473 11481555 -92013419 - L1_Mus3 LINE L1 -11 6627 5506 7 672 226 231 19 0 chr15 11481639 11481691 -92013283 - MIR SINE MIR -66 142 90 7 672 910 180 15 90 chr15 11481691 11481892 -92013082 + ORR1D1 LTR MaLR 1 186 -188 7 672 3461 53 2 0 chr15 11483765 11484164 -92010810 + MTB LTR MaLR 1 400 0 7 672 566 229 30 15 chr15 11484415 11484548 -92010426 - ID_B1 SINE B4 0 224 90 7 672 8145 211 49 14 chr15 11484713 11485604 -92009370 + Lx7 LINE L1 5043 5894 -1802 7 672 305 47 23 0 chr15 11485604 11485647 -92009327 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 672 8145 220 53 82 chr15 11485647 11487079 -92007895 + Lx7 LINE L1 5895 7367 -329 7 672 1140 124 0 0 chr15 11487079 11487257 -92007717 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 7 672 8145 220 53 82 chr15 11487257 11487615 -92007359 + Lx7 LINE L1 7368 7696 0 7 672 1201 101 0 0 chr15 11487725 11487873 -92007101 + B1_Mus1 SINE Alu 1 148 0 7 672 261 0 0 0 chr15 11488190 11488219 -92006755 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 672 591 15 0 0 chr15 11488219 11488286 -92006688 + (GA)n Simple_repeat Simple_repeat 1 68 0 7 672 1518 267 103 33 chr15 11488297 11488840 -92006134 + Lx9 LINE L1 6711 7291 -353 7 672 407 272 7 0 chr15 11488842 11488978 -92005996 + GA-rich Low_complexity Low_complexity 1 137 0 7 672 531 264 82 63 chr15 11489015 11489334 -92005640 + Lx9 LINE L1 7316 7640 -4 7 672 526 301 0 0 chr15 11489388 11489501 -92005473 - RSINE1 SINE B4 -50 115 3 7 672 1993 194 34 3 chr15 11489861 11490248 -92004726 + Lx4B LINE L1 6268 6666 -392 7 672 390 244 29 22 chr15 11490225 11490363 -92004611 + Lx2B LINE L1 6862 7000 0 7 672 781 168 12 29 chr15 11491117 11491363 -92003611 + GA-rich Low_complexity Low_complexity 1 241 0 7 672 2211 63 0 0 chr15 11491985 11492256 -92002718 - L1_Mus1 LINE L1 -386 6181 5911 7 672 275 270 53 38 chr15 11492879 11493010 -92001964 + Lx9 LINE L1 7505 7637 -7 7 672 284 102 20 0 chr15 11493080 11493129 -92001845 + (TCTCCC)n Simple_repeat Simple_repeat 1 50 0 7 672 783 16 50 0 chr15 11493224 11493345 -92001629 + (CA)n Simple_repeat Simple_repeat 1 127 0 7 672 223 398 24 0 chr15 11493345 11493468 -92001506 + L2a LINE L2 2957 3082 -344 7 672 262 164 0 18 chr15 11493687 11493743 -92001231 - Lx4B LINE L1 -4 7054 7000 7 672 742 308 80 75 chr15 11493751 11494112 -92000862 - MLT1A1 LTR MaLR -3 405 43 7 672 577 158 7 7 chr15 11494381 11494521 -92000453 + (TG)n Simple_repeat Simple_repeat 1 140 0 7 672 213 214 20 10 chr15 11494541 11494640 -92000334 + (TG)n Simple_repeat Simple_repeat 2 101 0 7 672 578 291 134 47 chr15 11496062 11496315 -91998659 + B4 SINE B4 18 292 0 7 672 21 36 0 0 chr15 11496543 11496571 -91998403 + AT_rich Low_complexity Low_complexity 1 28 0 7 672 3593 28 5 0 chr15 11497142 11497536 -91997438 - MTA_Mm LTR MaLR 0 396 1 7 672 1187 273 144 39 chr15 11497940 11498703 -91996271 - L1MC3 LINE L1 -14 7771 6929 7 672 275 206 54 14 chr15 11498711 11498785 -91996189 + L1_Mur3 LINE L1 5303 5379 -501 7 672 587 254 52 11 chr15 11498774 11498965 -91996009 - Lx7 LINE L1 -1651 6045 5847 7 672 571 273 0 14 chr15 11498966 11499107 -91995867 + MT2A LTR ERVL 326 464 -69 7 672 38 39 0 0 chr15 11499212 11499264 -91995710 + AT_rich Low_complexity Low_complexity 1 52 0 7 672 405 0 0 0 chr15 11499684 11499729 -91995245 + (TTTC)n Simple_repeat Simple_repeat 2 46 0 7 672 2656 58 9 3 chr15 11500299 11500643 -91994331 + L1_Mus3 LINE L1 6290 6635 -3 1 672 3763 144 39 16 chr15 11500811 11501502 -91993472 + Lx4B LINE L1 6304 7010 -48 2 672 251 73 49 0 chr15 11501520 11501561 -91993413 + (CATA)n Simple_repeat Simple_repeat 2 44 0 3 672 213 355 13 0 chr15 11501674 11501750 -91993224 - MIR3 SINE MIR -19 189 113 4 672 304 328 33 25 chr15 11501934 11502056 -91992918 - MER94 DNA AcHobo -6 128 6 5 672 642 260 107 20 chr15 11502602 11502798 -91992176 + MER20 DNA MER1_type 7 219 0 6 672 633 296 78 14 chr15 11503045 11503326 -91991648 + Lx8 LINE L1 7173 7471 -2 7 672 342 314 0 17 chr15 11503538 11503658 -91991316 - PB1D7 SINE Alu -2 118 1 8 672 566 265 154 6 chr15 11504051 11504233 -91990741 - MIR SINE MIR -42 220 12 9 672 261 333 0 11 chr15 11505917 11506008 -91988966 - Kanga1a DNA Tc2 -656 98 9 1 672 1227 161 14 22 chr15 11507454 11507677 -91987297 - URR1A DNA MER1_type -1 225 5 1 672 1242 295 101 23 chr15 11507857 11508343 -91986631 - MLT2B4 LTR ERVL -25 531 8 1 672 232 343 46 0 chr15 11508686 11508794 -91986180 + PB1D10 SINE Alu 5 117 0 1 672 303 368 14 95 chr15 11508855 11509002 -91985972 + ID_B1 SINE B4 2 136 -88 1 672 1179 106 8 11 chr15 11509051 11509316 -91985658 + (TAGA)n Simple_repeat Simple_repeat 1 263 0 1 672 216 250 0 111 chr15 11509488 11509551 -91985423 + ID4_ SINE ID 4 59 -24 1 672 193 29 59 0 chr15 11509685 11509719 -91985255 + (CAAAAA)n Simple_repeat Simple_repeat 6 41 0 1 672 3127 14 0 0 chr15 11510420 11510766 -91984208 - ORR1A0 LTR MaLR 0 346 1 1 672 14657 42 1 1 chr15 11510766 11512558 -91982416 - ORR1A0-int LTR MaLR 0 1792 1 1 672 3084 17 3 0 chr15 11512558 11512903 -91982071 - ORR1A0 LTR MaLR 0 346 1 1 672 5539 190 63 33 chr15 11513011 11514483 -91980491 + L1_Mur3 LINE L1 4300 5815 -65 1 672 366 47 46 15 chr15 11514529 11514594 -91980380 + (TTTA)n Simple_repeat Simple_repeat 3 69 0 2 672 489 219 0 8 chr15 11514597 11514717 -91980257 + Lx7 LINE L1 7578 7696 0 2 672 287 287 90 56 chr15 11515051 11515195 -91979779 - ORR1E LTR MaLR 0 379 231 2 672 444 331 37 12 chr15 11515213 11515375 -91979599 - ORR1E LTR MaLR -188 171 6 2 672 320 225 161 44 chr15 11515602 11515931 -91979043 + L1M4b LINE L1 2213 2478 -4856 2 672 621 293 129 54 chr15 11516043 11516599 -91978375 + L1M4b LINE L1 2685 3282 -4052 2 672 427 254 40 0 chr15 11518042 11518179 -91976795 + MLT1B LTR MaLR 218 366 -8 2 672 2293 139 21 10 chr15 11518179 11518565 -91976409 + Lx LINE L1 6255 6644 -10 2 672 250 324 0 0 chr15 11518841 11518915 -91976059 - MER90 LTR ERV1 -452 123 50 2 672 22 35 0 0 chr15 11519028 11519057 -91975917 + AT_rich Low_complexity Low_complexity 1 29 0 2 672 27 0 0 0 chr15 11519272 11519299 -91975675 + AT_rich Low_complexity Low_complexity 1 27 0 2 672 269 296 186 37 chr15 11520461 11521138 -91973836 + L1MC4 LINE L1 661 1438 -4777 2 672 310 285 38 8 chr15 11521321 11521452 -91973522 + L1MC4 LINE L1 1750 1884 -4331 2 672 899 254 172 30 chr15 11521653 11522026 -91972948 + Lx8 LINE L1 6901 7326 -147 3 672 385 306 35 0 chr15 11522031 11522175 -91972799 + HAL1-3A_ME LINE L1 1976 2124 -734 3 672 488 16 16 0 chr15 11522344 11522405 -91972569 + (TG)n Simple_repeat Simple_repeat 2 63 0 3 672 966 110 0 0 chr15 11522710 11522856 -91972118 + (GAA)n Simple_repeat Simple_repeat 2 147 0 3 672 381 316 246 41 chr15 11522856 11523318 -91971656 + L1MC4 LINE L1 7225 7784 -258 3 672 900 0 0 0 chr15 11523937 11524037 -91970937 + (GAAA)n Simple_repeat Simple_repeat 3 102 0 3 672 414 57 0 0 chr15 11524039 11524092 -91970882 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 3 672 723 124 0 0 chr15 11524193 11524306 -91970668 + (TTTC)n Simple_repeat Simple_repeat 3 115 0 3 672 2427 42 77 0 chr15 11524556 11524869 -91970105 - L1_Mus1 LINE L1 0 6567 6231 3 672 219 221 0 34 chr15 11525728 11525817 -91969157 + CT-rich Low_complexity Low_complexity 2 87 0 3 672 862 270 120 4 chr15 11525859 11526154 -91968820 - MLT1A0 LTR MaLR -21 369 1 4 672 646 315 87 14 chr15 11526245 11526532 -91968442 + Lx8 LINE L1 6635 6943 -530 4 672 279 54 0 0 chr15 11526532 11526569 -91968405 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 672 646 311 88 12 chr15 11526569 11526697 -91968277 + Lx8 LINE L1 6944 7089 -384 4 672 395 269 133 26 chr15 11526722 11526829 -91968145 - L1MB5 LINE L1 -275 5899 5790 4 672 2459 101 60 30 chr15 11526829 11527226 -91967748 + RLTR9E LTR ERVK 1 409 0 4 672 395 269 133 26 chr15 11527226 11527351 -91967623 - L1MB5 LINE L1 -385 5789 5642 4 672 331 277 133 54 chr15 11527355 11527764 -91967210 + L1ME2 LINE L1 5668 6118 -46 4 672 1244 204 119 0 chr15 11527816 11528159 -91966815 + Lx9 LINE L1 7259 7642 -2 4 672 288 291 12 12 chr15 11528366 11528446 -91966528 - ID4_ SINE ID -2 81 2 4 672 320 265 97 10 chr15 11528460 11528563 -91966411 - B1F SINE Alu -17 132 21 4 672 7281 87 9 1 chr15 11528687 11529717 -91965257 - L1_Mus4 LINE L1 -1 6635 5598 4 672 1400 151 4 4 chr15 11529716 11529969 -91965005 - L1_Mur2 LINE L1 -600 5277 5025 5 672 5769 131 4 35 chr15 11529969 11531025 -91963949 + L1_Mm LINE L1 3981 5003 -880 5 672 229 385 55 43 chr15 11531116 11531279 -91963695 - MLT1H LTR MaLR -237 312 148 5 672 559 174 0 0 chr15 11531405 11531497 -91963477 + B3 SINE B2 2 93 -123 5 672 25 0 0 0 chr15 11531546 11531571 -91963403 + AT_rich Low_complexity Low_complexity 1 25 0 5 672 252 349 118 70 chr15 11531732 11532089 -91962885 + ORR1C2 LTR MaLR 1 374 0 5 672 498 237 127 85 chr15 11532431 11532643 -91962331 + MTE2a LTR MaLR 159 379 0 5 672 814 291 117 30 chr15 11532952 11533123 -91961851 - RMER5 LTR ERV1 -19 515 325 5 672 3212 48 2 8 chr15 11533123 11533521 -91961453 + MTA_Mm LTR MaLR 1 396 0 5 672 814 291 117 30 chr15 11533521 11533784 -91961190 - RMER5 LTR ERV1 -210 324 43 5 10 291 229 167 28 chr15 11534334 11534442 -91960532 - MTD LTR MaLR -17 402 280 5 673 373 210 140 65 chr15 11535178 11535285 -91959689 + RSINE1 SINE B4 4 118 -47 6 673 543 69 0 0 chr15 11535291 11535363 -91959611 + (CA)n Simple_repeat Simple_repeat 2 73 0 6 673 1233 56 11 6 chr15 11535998 11536178 -91958796 - L1_Mur1 LINE L1 -460 5426 5246 6 673 7069 65 40 2 chr15 11536178 11537120 -91957854 + Lx3_Mus LINE L1 6032 7009 0 6 673 23 0 0 0 chr15 11537679 11537702 -91957272 + AT_rich Low_complexity Low_complexity 1 23 0 6 673 1096 242 82 28 chr15 11537921 11538267 -91956707 - MTD LTR MaLR -14 393 1 6 673 798 291 32 14 chr15 11538988 11539204 -91955770 + Tigger7 DNA MER2_type 554 773 -1718 6 673 642 299 0 40 chr15 11539432 11539606 -91955368 + B3A SINE B2 14 180 -18 6 673 189 0 0 0 chr15 11539620 11539641 -91955333 + (CA)n Simple_repeat Simple_repeat 1 21 0 6 673 291 406 66 39 chr15 11539765 11540021 -91954953 - MLT1J2 LTR MaLR -184 264 2 6 673 957 76 0 0 chr15 11540289 11540433 -91954541 + (GGGAGA)n Simple_repeat Simple_repeat 2 145 0 7 673 441 0 0 0 chr15 11540468 11540517 -91954457 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 673 363 44 0 0 chr15 11542118 11542163 -91952811 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 673 325 366 99 5 chr15 11542998 11543190 -91951784 - MLT1J1 LTR MaLR -218 226 17 7 673 2195 36 22 0 chr15 11543200 11543474 -91951500 + L1_Mus2 LINE L1 6287 6566 0 7 673 293 347 81 16 chr15 11543488 11543611 -91951363 - MER82 DNA MER2_type -1 652 522 7 673 426 108 0 0 chr15 11543611 11543685 -91951289 + (GA)n Simple_repeat Simple_repeat 1 74 0 7 673 509 261 50 67 chr15 11543685 11543923 -91951051 - MER82 DNA MER2_type -151 502 269 7 673 249 119 0 0 chr15 11543923 11543965 -91951009 + (TGGA)n Simple_repeat Simple_repeat 1 42 0 7 673 471 127 52 32 chr15 11543967 11544218 -91950756 + (TAGA)n Simple_repeat Simple_repeat 1 256 0 7 673 559 305 76 17 chr15 11544224 11544461 -91950513 - MER82 DNA MER2_type -402 251 1 7 673 426 282 85 68 chr15 11544557 11544721 -91950253 - B3A SINE B2 -23 175 5 7 673 575 301 39 0 chr15 11545021 11545177 -91949797 + B4A SINE B4 68 229 -63 8 673 1239 192 150 12 chr15 11545373 11545700 -91949274 + RMER1B Other Other 44 415 -651 8 673 2186 221 38 112 chr15 11545687 11546989 -91947985 + RMER1B Other Other 2 1054 -12 8 673 234 0 0 0 chr15 11546991 11547017 -91947957 + (CAA)n Simple_repeat Simple_repeat 2 27 0 8 673 228 300 24 59 chr15 11547448 11547533 -91947441 - ID4_ SINE ID 0 83 2 8 673 384 301 39 58 chr15 11547542 11547829 -91947145 - L1MB8 LINE L1 -1 6183 5899 8 673 33488 61 2 5 chr15 11547851 11554026 -91940948 - L1Md_F2 LINE L1 -14 6568 415 8 673 349 365 49 16 chr15 11554095 11554340 -91940634 - L1M4b LINE L1 -6415 919 667 8 673 349 273 11 11 chr15 11554360 11554449 -91940525 - MLT1C LTR MaLR -8 459 371 8 673 1723 275 98 25 chr15 11555003 11556111 -91938863 + L1MA7 LINE L1 5086 6281 -10 8 673 23 0 0 0 chr15 11557836 11557859 -91937115 + AT_rich Low_complexity Low_complexity 1 23 0 9 673 477 90 0 0 chr15 11557871 11557938 -91937036 + (GGA)n Simple_repeat Simple_repeat 2 68 0 9 673 205 205 0 0 chr15 11558515 11558554 -91936420 + T-rich Low_complexity Low_complexity 1 39 0 9 673 615 92 0 0 chr15 11559300 11559387 -91935587 + (TA)n Simple_repeat Simple_repeat 1 87 0 9 673 301 242 63 0 chr15 11559855 11559950 -91935024 - L1MC4 LINE L1 -556 7486 7386 9 673 3414 150 38 13 chr15 11560062 11560691 -91934283 - RLTR17 LTR ERVK -118 574 1 9 673 676 197 6 32 chr15 11560793 11560950 -91934024 - Lx4A LINE L1 -4 7054 6902 9 673 3951 139 51 17 chr15 11560952 11561677 -91933297 - Lx4A LINE L1 -282 6776 6027 9 673 778 318 89 84 chr15 11561814 11561935 -91933039 - MLT2B1 LTR ERVL -44 476 345 9 673 3466 23 2 0 chr15 11561935 11562330 -91932644 + MTA_Mm LTR MaLR 1 396 0 9 673 778 318 89 84 chr15 11562330 11562682 -91932292 - MLT2B1 LTR ERVL -176 344 1 9 673 513 299 103 47 chr15 11563780 11564120 -91930854 - ORR1E LTR MaLR 0 359 1 9 673 9520 52 2 1 chr15 11564539 11566484 -91928490 - L1Md_F2 LINE L1 -12 6570 4626 1 673 2359 114 167 15 chr15 11567176 11567638 -91927336 + RLTR47_MM LTR ERV1 1 532 0 1 673 255 31 0 0 chr15 11568326 11568358 -91926616 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 673 2951 167 56 51 chr15 11568501 11569087 -91925887 + RMER20B LTR ERVK 39 627 0 1 673 235 236 62 26 chr15 11569429 11569542 -91925432 + L1M2 LINE L1 1879 1995 -4854 1 673 30 0 0 0 chr15 11570205 11570235 -91924739 + AT_rich Low_complexity Low_complexity 1 30 0 1 673 25 0 0 0 chr15 11570279 11570304 -91924670 + AT_rich Low_complexity Low_complexity 1 25 0 1 673 575 251 102 5 chr15 11570321 11570537 -91924437 + Lx6 LINE L1 7217 7453 -7 1 673 398 289 134 118 chr15 11570570 11570876 -91924098 + MTE2a LTR MaLR 13 323 -56 1 673 377 309 42 5 chr15 11570908 11571100 -91923874 + L1_Mur2 LINE L1 4436 4634 -1243 1 673 633 276 55 43 chr15 11571238 11571564 -91923410 - L1MA4A LINE L1 -380 5923 5594 1 673 269 250 90 83 chr15 11573852 11573996 -91920978 - MLT1B LTR MaLR -6 384 240 1 673 251 258 0 0 chr15 11574346 11574408 -91920566 + CT-rich Low_complexity Low_complexity 2 63 0 1 673 425 119 117 17 chr15 11575018 11575138 -91919836 - Lx9 LINE L1 -6 7638 7507 1 673 3186 57 7 2 chr15 11575389 11575794 -91919180 - L1_Mus1 LINE L1 -1 6566 6160 1 673 191 207 90 32 chr15 11576171 11576248 -91918726 + MIRc SINE MIR 100 184 -92 1 673 339 306 73 40 chr15 11577088 11577265 -91917709 + L1ME2 LINE L1 4876 5058 -1088 1 673 353 275 109 23 chr15 11577280 11577455 -91917519 + L1MD LINE L1 5118 5307 -839 1 673 7078 74 2 0 chr15 11577517 11578482 -91916492 - L1_Mus4 LINE L1 -6 6630 5664 1 673 8522 158 15 27 chr15 11578461 11580117 -91914857 + L1_Mm LINE L1 4051 5687 -196 1 673 693 277 9 36 chr15 11580282 11580515 -91914459 - MTD LTR MaLR -101 306 88 1 673 249 289 31 62 chr15 11580699 11580795 -91914179 - MTD LTR MaLR -327 94 2 1 673 248 318 59 39 chr15 11580900 11581103 -91913871 + L1ME2 LINE L1 5606 5812 -367 1 673 342 361 32 70 chr15 11581163 11581435 -91913539 + L1ME2 LINE L1 5840 6113 -66 1 673 197 258 167 0 chr15 11582728 11582794 -91912180 - MIR3 SINE MIR -51 157 81 1 673 536 329 26 86 chr15 11583204 11583473 -91911501 + MER2 DNA MER2_type 92 344 -1 1 673 2839 44 7 129 chr15 11583768 11584210 -91910764 + RLTR10 LTR ERVK 1 388 -2 1 673 230 357 0 0 chr15 11584529 11584613 -91910361 - MIRb SINE MIR -72 196 113 1 673 1420 264 86 37 chr15 11585575 11586105 -91908869 + Lx6 LINE L1 6507 7440 -20 1 673 225 0 0 0 chr15 11586631 11586656 -91908318 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 673 1499 277 40 26 chr15 11586713 11587214 -91907760 - Lx7 LINE L1 -450 7246 6739 1 673 2442 257 80 28 chr15 11587213 11588615 -91906359 + Lx7 LINE L1 5263 6739 -957 1 673 649 308 121 39 chr15 11589110 11589294 -91905680 - B4A SINE B4 -9 283 84 1 673 627 53 0 21 chr15 11589294 11589391 -91905583 - L1Md_F2 LINE L1 -12 6570 6476 1 673 649 308 121 39 chr15 11589391 11589463 -91905511 - B4A SINE B4 -209 83 6 1 673 1722 110 38 21 chr15 11589739 11590028 -91904946 - L1_Mus4 LINE L1 -17 6619 6326 1 673 322 365 107 37 chr15 11590380 11590895 -91904079 + L2 LINE L2 2258 2808 -611 1 673 2373 91 9 14 chr15 11591089 11591434 -91903540 + L1_Mus4 LINE L1 6294 6636 0 1 673 621 0 0 0 chr15 11592866 11592935 -91902039 + (GTTTG)n Simple_repeat Simple_repeat 1 69 0 1 673 237 265 0 0 chr15 11592992 11593041 -91901933 + ID4_ SINE ID 3 51 -32 1 673 360 266 13 6 chr15 11593091 11593250 -91901724 + GA-rich Low_complexity Low_complexity 2 161 0 1 673 310 82 32 32 chr15 11593268 11593331 -91901643 + (GAAAA)n Simple_repeat Simple_repeat 2 64 0 1 673 225 0 0 0 chr15 11593613 11593638 -91901336 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 673 300 91 0 0 chr15 11594179 11594223 -91900751 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 673 297 0 0 0 chr15 11596062 11596095 -91898879 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 673 485 344 46 0 chr15 11597133 11597264 -91897710 + ID_B1 SINE B4 87 223 -1 1 673 374 278 34 17 chr15 11597340 11597457 -91897517 - PB1D7 SINE Alu -1 119 1 1 673 635 228 65 0 chr15 11598231 11598354 -91896620 - ID_B1 SINE B4 -5 219 89 1 673 290 352 49 0 chr15 11598553 11598695 -91896279 - Lx8 LINE L1 -145 7328 7180 1 673 4336 74 0 12 chr15 11598721 11599295 -91895679 - L1_Mus2 LINE L1 -1 6565 5999 1 673 240 354 67 49 chr15 11600776 11600999 -91893975 + L2a LINE L2 3200 3426 0 1 673 552 30 0 0 chr15 11601538 11601604 -91893370 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 673 785 319 11 67 chr15 11601636 11601918 -91893056 - B4A SINE B4 -26 266 1 1 673 193 281 29 86 chr15 11602832 11602902 -91892072 - MIRm SINE MIR -207 69 4 1 673 394 151 96 0 chr15 11603093 11603166 -91891808 + RLTR28 LTR ERVL 1 80 -401 1 673 192 40 0 0 chr15 11603166 11603191 -91891783 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 673 1162 142 93 14 chr15 11603194 11603409 -91891565 + RLTR28 LTR ERVL 293 524 0 1 673 311 362 44 50 chr15 11603574 11603754 -91891220 - MLT1G3 LTR MaLR -2 593 415 1 673 1231 191 98 82 chr15 11603934 11604361 -91890613 + Lx7 LINE L1 7263 7696 0 1 673 1378 43 102 0 chr15 11604511 11604698 -91890276 - L1_Mus1 LINE L1 -193 6374 6169 1 673 1743 33 14 0 chr15 11604698 11604909 -91890065 + L1_Mus1 LINE L1 6353 6566 -1 1 673 463 189 45 56 chr15 11605594 11605773 -91889201 + RMER17C LTR ERVK 101 277 -133 1 673 534 273 83 0 chr15 11606006 11606127 -91888847 - RSINE1 SINE B4 -32 133 3 1 673 675 233 124 25 chr15 11606162 11606404 -91888570 - Lx8 LINE L1 -17 7456 7191 1 673 1379 247 39 17 chr15 11606599 11607144 -91887830 + Lx9 LINE L1 5522 6111 -1533 1 673 972 23 23 0 chr15 11607225 11607356 -91887618 + (TAGA)n Simple_repeat Simple_repeat 4 137 0 1 673 238 64 85 0 chr15 11607382 11607429 -91887545 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 1 673 589 329 40 0 chr15 11607431 11607583 -91887391 - B4 SINE B4 -134 158 1 1 673 442 70 28 0 chr15 11607742 11607813 -91887161 + (TATG)n Simple_repeat Simple_repeat 1 73 0 1 673 479 267 37 59 chr15 11608040 11608227 -91886747 - B3A SINE B2 -15 183 1 1 673 330 26 0 0 chr15 11608284 11608323 -91886651 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 673 351 44 0 0 chr15 11608323 11608367 -91886607 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 673 619 354 9 12 chr15 11608562 11608899 -91886075 - Lx9 LINE L1 -222 7422 7087 1 673 1032 249 102 15 chr15 11608970 11609313 -91885661 + Lx7 LINE L1 6942 7314 -382 1 673 685 68 9 19 chr15 11609323 11609428 -91885546 + (TTTC)n Simple_repeat Simple_repeat 4 107 0 1 673 303 220 0 0 chr15 11609534 11609625 -91885349 + (TG)n Simple_repeat Simple_repeat 2 92 0 1 673 914 152 7 0 chr15 11609635 11609773 -91885201 - B1_Mus2 SINE Alu -8 139 1 1 673 4107 30 0 0 chr15 11610006 11610479 -91884495 - L1Md_T LINE L1 -1 6581 6109 1 673 745 233 118 42 chr15 11610597 11610751 -91884223 - Lx6 LINE L1 0 7696 7522 1 673 1199 71 18 0 chr15 11610751 11610920 -91884054 + (GGAGAA)n Simple_repeat Simple_repeat 3 174 0 1 673 745 233 118 42 chr15 11610920 11610998 -91883976 - Lx6 LINE L1 -175 7521 7449 1 673 908 70 16 0 chr15 11610998 11611126 -91883848 + (GAAA)n Simple_repeat Simple_repeat 4 133 0 1 673 763 246 98 14 chr15 11611126 11611336 -91883638 - Lx6 LINE L1 -275 7185 6959 1 673 413 358 105 20 chr15 11612673 11613151 -91881823 - L2a LINE L2 -112 3314 2798 1 673 304 318 94 91 chr15 11613175 11613525 -91881449 - ORR1D1 LTR MaLR 0 374 24 1 673 21 0 0 0 chr15 11613530 11613551 -91881423 + GC_rich Low_complexity Low_complexity 1 21 0 1 673 265 267 82 16 chr15 11613743 11613865 -91881109 - L2a LINE L2 -760 2659 2530 1 673 629 257 73 0 chr15 11614355 11614491 -91880483 + B1_Mur2 SINE Alu 1 146 -3 1 673 1125 309 98 58 chr15 11614781 11614814 -91880160 - Lx8 LINE L1 -29 7444 7411 1 673 3028 68 65 5 chr15 11614814 11615198 -91879776 - MTB_Mm LTR MaLR 0 407 1 1 673 1125 309 98 58 chr15 11615198 11615765 -91879209 - Lx8 LINE L1 -63 7410 6820 1 673 610 277 263 3 chr15 11615797 11616090 -91878884 - Lx8 LINE L1 -818 6655 6287 1 673 22 35 0 0 chr15 11616487 11616516 -91878458 + AT_rich Low_complexity Low_complexity 1 29 0 1 673 7094 46 4 9 chr15 11616651 11617463 -91877511 + RLTR13C2 LTR ERVK 1 808 0 1 673 195 352 0 0 chr15 11618622 11618676 -91876298 + L2c LINE L2 3028 3081 -306 1 673 1911 191 20 36 chr15 11618875 11619265 -91875709 + ORR1C2 LTR MaLR 1 384 0 1 673 472 146 10 10 chr15 11619349 11619453 -91875521 + CT-rich Low_complexity Low_complexity 2 105 0 1 673 2450 153 68 13 chr15 11619560 11619957 -91875017 - MTC LTR MaLR -2 419 1 1 673 191 388 10 30 chr15 11619970 11620071 -91874903 - MIRc SINE MIR -150 118 20 1 673 1059 298 117 14 chr15 11620305 11620672 -91874302 + Lx8 LINE L1 6827 7229 -244 1 673 291 28 0 0 chr15 11620672 11620708 -91874266 + (TTTTG)n Simple_repeat Simple_repeat 3 38 0 1 673 1059 298 117 14 chr15 11620708 11620790 -91874184 + Lx8 LINE L1 7230 7322 -151 1 673 779 64 9 0 chr15 11620790 11620900 -91874074 + (TAGA)n Simple_repeat Simple_repeat 2 112 0 1 673 1059 298 117 14 chr15 11620900 11620952 -91874022 + Lx8 LINE L1 7323 7381 -92 1 673 268 182 103 93 chr15 11621274 11621371 -91873603 + MLT1A1 LTR MaLR 305 402 -6 1 673 690 44 0 0 chr15 11621917 11622007 -91872967 + (TGG)n Simple_repeat Simple_repeat 3 92 0 1 673 885 266 91 10 chr15 11622349 11622656 -91872318 - L1M2 LINE L1 -629 5683 5352 1 673 952 276 78 39 chr15 11622657 11623068 -91871906 - Lx8 LINE L1 0 7473 7047 1 673 228 352 74 0 chr15 11624130 11624252 -91870722 + MIRb SINE MIR 111 241 -27 1 673 211 125 0 24 chr15 11624266 11624307 -91870667 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 1 673 464 232 25 67 chr15 11624734 11624854 -91870120 - PB1D10 SINE Alu -2 115 1 1 673 996 245 15 0 chr15 11625344 11625548 -91869426 - B3 SINE B2 -8 208 2 1 673 23 33 0 0 chr15 11625684 11625714 -91869260 + AT_rich Low_complexity Low_complexity 1 30 0 1 673 351 0 0 0 chr15 11626079 11626118 -91868856 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 673 269 159 0 16 chr15 11626119 11626183 -91868791 + GA-rich Low_complexity Low_complexity 2 64 0 2 673 343 222 0 0 chr15 11626247 11626310 -91868664 + B4 SINE B4 163 225 -67 2 673 261 221 0 0 chr15 11626409 11626477 -91868497 + (CA)n Simple_repeat Simple_repeat 1 68 0 2 673 207 0 0 0 chr15 11626871 11626894 -91868080 + (T)n Simple_repeat Simple_repeat 1 23 0 2 673 307 324 38 50 chr15 11627017 11627249 -91867725 + MIRc SINE MIR 18 241 -27 2 673 289 298 48 38 chr15 11630511 11630816 -91864158 + L1M3 LINE L1 2678 2999 -3147 2 673 345 278 197 11 chr15 11630822 11631106 -91863868 + L1M5 LINE L1 3063 3399 -2747 2 673 222 37 0 0 chr15 11631447 11631474 -91863500 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 673 315 65 0 0 chr15 11631474 11631520 -91863454 + (GA)n Simple_repeat Simple_repeat 2 47 0 2 673 275 312 39 0 chr15 11633312 11633389 -91861585 + MLT1J1 LTR MaLR 3 82 -362 2 673 492 0 14 29 chr15 11634214 11634284 -91860690 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 2 673 1181 73 0 0 chr15 11634284 11634421 -91860553 - B1_Mus2 SINE Alu -10 137 1 2 673 863 247 138 50 chr15 11634501 11634641 -91860333 + L1MC1 LINE L1 4398 4549 -1597 2 673 2728 86 0 0 chr15 11634641 11634967 -91860007 - ORR1A2 LTR MaLR 0 327 2 2 673 863 247 138 50 chr15 11634967 11635282 -91859692 + L1MC1 LINE L1 4550 4893 -1253 2 673 310 293 113 27 chr15 11635348 11635518 -91859456 + L1MC1 LINE L1 5023 5210 -936 2 673 3630 30 2 0 chr15 11635518 11635913 -91859061 + MTA_Mm LTR MaLR 1 396 0 2 673 1363 280 143 24 chr15 11635913 11636904 -91858070 + L1MC1 LINE L1 5211 6330 -14 2 673 1016 16 8 0 chr15 11638570 11638692 -91856282 + B1_Mm SINE Alu 25 147 0 2 673 665 181 7 0 chr15 11638714 11639160 -91855814 + (TG)n Simple_repeat Simple_repeat 1 449 0 2 673 1028 237 198 19 chr15 11639318 11639632 -91855342 + ORR1D2 LTR MaLR 1 370 0 2 673 496 292 20 15 chr15 11639649 11639847 -91855127 + L1MC3 LINE L1 7470 7668 -117 2 673 302 302 113 13 chr15 11640091 11640389 -91854585 - Charlie4a DNA MER1_type -104 404 72 2 673 7839 13 2 0 chr15 11640418 11641238 -91853736 + RLTR13B2 LTR ERVK 1 822 0 2 673 686 132 19 9 chr15 11641299 11641406 -91853568 + B1_Mur4 SINE Alu 31 138 -12 2 673 315 0 0 0 chr15 11641406 11641441 -91853533 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 2 673 988 296 86 17 chr15 11643526 11643889 -91851085 + MTD LTR MaLR 1 404 -17 2 673 261 267 25 16 chr15 11643913 11644005 -91850969 - ORR1E LTR MaLR -7 372 281 2 673 296 324 106 60 chr15 11644052 11644269 -91850705 - ORR1E LTR MaLR -105 254 28 2 673 265 337 51 0 chr15 11644479 11644577 -91850397 + MER94 DNA AcHobo 23 125 -9 2 673 408 274 31 36 chr15 11645499 11645665 -91849309 + MIR SINE MIR 31 189 -87 2 673 946 238 52 127 chr15 11645934 11646319 -91848655 - ORR1E LTR MaLR -2 357 2 2 673 347 352 0 32 chr15 11646612 11646797 -91848177 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 673 23 0 0 0 chr15 11646917 11646940 -91848034 + AT_rich Low_complexity Low_complexity 1 23 0 2 673 2287 123 18 0 chr15 11647391 11647732 -91847242 - Lx3C LINE L1 -522 6454 6108 2 673 405 0 0 0 chr15 11647733 11647778 -91847196 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 673 2945 147 31 57 chr15 11647789 11648302 -91846672 + Lx3C LINE L1 6470 6969 -7 2 673 272 211 24 73 chr15 11648383 11648465 -91846509 - PB1D10 SINE Alu 0 117 40 2 673 1977 132 123 27 chr15 11648597 11648970 -91846004 + RLTR9E LTR ERVK 1 409 0 2 673 410 322 13 7 chr15 11651498 11651648 -91843326 + L1MC2 LINE L1 6055 6205 -139 2 673 1218 54 0 57 chr15 11651772 11651784 -91843190 - B1_Mus1 SINE Alu 0 148 139 2 673 279 0 0 0 chr15 11651784 11651815 -91843159 + (TTG)n Simple_repeat Simple_repeat 2 32 0 2 673 1218 54 0 57 chr15 11651815 11651959 -91843015 - B1_Mus1 SINE Alu -10 138 1 2 673 24 32 0 0 chr15 11651962 11651993 -91842981 + AT_rich Low_complexity Low_complexity 1 31 0 2 673 185 325 65 0 chr15 11653397 11653474 -91841500 - L2a LINE L2 -10 3416 3335 2 673 329 86 17 0 chr15 11654035 11654093 -91840881 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 2 673 372 43 0 0 chr15 11654308 11654354 -91840620 + (CTTG)n Simple_repeat Simple_repeat 2 47 0 2 673 1228 103 62 11 chr15 11656521 11656697 -91838277 + B2_Mm2 SINE B2 2 186 -9 2 673 436 247 45 90 chr15 11656959 11656995 -91837979 - B2_Mm2 SINE B2 -2 193 156 2 673 693 66 0 0 chr15 11656995 11657086 -91837888 + (TC)n Simple_repeat Simple_repeat 2 92 0 2 673 423 56 0 0 chr15 11657086 11657139 -91837835 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 673 600 219 46 42 chr15 11657139 11657301 -91837673 - B3A SINE B2 -42 156 3 2 673 441 228 8 8 chr15 11657898 11658026 -91836948 - Lx9 LINE L1 -2 7642 7515 2 673 202 179 53 18 chr15 11658256 11658313 -91836661 + (TTATA)n Simple_repeat Simple_repeat 2 60 0 2 673 378 0 0 0 chr15 11659026 11659068 -91835906 + (CATA)n Simple_repeat Simple_repeat 1 42 0 2 673 501 285 119 60 chr15 11660722 11660934 -91834040 + Lx7 LINE L1 7083 7313 -383 2 673 300 111 0 0 chr15 11660934 11660979 -91833995 + (TTG)n Simple_repeat Simple_repeat 2 46 0 2 673 501 285 119 60 chr15 11660979 11661001 -91833973 + Lx7 LINE L1 7314 7331 -365 2 673 269 205 32 64 chr15 11661012 11661137 -91833837 + Lx7 LINE L1 7576 7696 0 2 673 278 271 92 20 chr15 11662082 11662180 -91832794 + LTR33A_ LTR ERVL 9 113 -418 2 673 1142 206 57 0 chr15 11662599 11662808 -91832166 - URR1B DNA MER1_type -4 221 1 2 673 251 333 83 12 chr15 11663621 11663861 -91831113 - L1MB7 LINE L1 -10 6174 5918 2 673 412 274 0 0 chr15 11663880 11663982 -91830992 - L1MB7 LINE L1 -422 5762 5661 2 673 2780 88 56 20 chr15 11664160 11664554 -91830420 - Lx LINE L1 0 6654 6247 2 673 340 284 114 43 chr15 11664801 11664941 -91830033 + RSINE1 SINE B4 3 152 -13 2 673 315 0 0 0 chr15 11664950 11664985 -91829989 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 673 267 104 0 0 chr15 11664989 11665037 -91829937 + (CAGAGA)n Simple_repeat Simple_repeat 1 48 0 2 673 659 191 6 0 chr15 11665079 11665236 -91829738 + GA-rich Low_complexity Low_complexity 1 158 0 2 674 226 354 83 23 chr15 11665628 11665761 -91829213 + MIR3 SINE MIR 13 153 -55 2 674 261 256 4 0 chr15 11667956 11668024 -91826950 + ID2 SINE ID 1 70 -13 2 674 1315 167 18 0 chr15 11668360 11668581 -91826393 - URR1B DNA MER1_type 0 225 1 2 674 1127 89 0 0 chr15 11669172 11669318 -91825656 + B1_Mus1 SINE Alu 3 148 0 2 674 818 70 0 9 chr15 11669407 11669522 -91825452 + (TTCTCC)n Simple_repeat Simple_repeat 2 115 0 2 674 532 258 150 68 chr15 11669532 11669798 -91825176 - B4A SINE B4 0 292 5 2 674 531 31 0 0 chr15 11670309 11670374 -91824600 + (CA)n Simple_repeat Simple_repeat 1 65 0 2 674 396 0 0 0 chr15 11670719 11670763 -91824211 + (GA)n Simple_repeat Simple_repeat 1 44 0 2 674 899 170 328 16 chr15 11672976 11673102 -91821872 - RMER17C LTR ERVK 0 410 234 2 674 597 28 0 0 chr15 11673102 11673173 -91821801 + (GGGA)n Simple_repeat Simple_repeat 3 73 0 2 674 899 170 328 16 chr15 11673173 11673357 -91821617 - RMER17C LTR ERVK -177 233 3 2 674 265 125 0 20 chr15 11676085 11676134 -91818840 - U2 snRNA snRNA -140 48 1 2 674 263 294 58 8 chr15 11676191 11676311 -91818663 + L1ME2 LINE L1 5910 6035 -129 2 674 477 50 0 0 chr15 11676854 11676914 -91818060 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 2 674 244 300 0 0 chr15 11676917 11676977 -91817997 + Lx8 LINE L1 7265 7324 -149 2 674 499 244 0 24 chr15 11676987 11677151 -91817823 + (TATATG)n Simple_repeat Simple_repeat 1 160 0 2 674 289 203 13 13 chr15 11677155 11677230 -91817744 + Lx8 LINE L1 7397 7471 -2 2 674 23 0 0 0 chr15 11677234 11677257 -91817717 + AT_rich Low_complexity Low_complexity 1 23 0 2 674 752 289 209 24 chr15 11677801 11678098 -91816876 + L1ME3 LINE L1 5269 5608 -554 2 674 2288 150 20 25 chr15 11678098 11678494 -91816480 - ORR1B1 LTR MaLR 0 394 1 2 674 752 291 200 22 chr15 11678494 11678923 -91816051 + L1ME3 LINE L1 5609 6123 -56 2 674 584 208 48 0 chr15 11679027 11679152 -91815822 + Lx7 LINE L1 6884 7014 -682 2 674 540 97 11 6 chr15 11679152 11679259 -91815715 + B1_Mur4 SINE Alu 40 149 -1 2 674 1456 236 3 6 chr15 11679279 11679594 -91815380 + Lx7 LINE L1 7051 7364 -332 2 674 1509 151 76 76 chr15 11679603 11679753 -91815221 + Lx7 LINE L1 7317 7464 -232 2 674 2622 67 12 0 chr15 11679753 11680097 -91814877 - L1_Mus3 LINE L1 -7 6631 6284 2 674 1509 151 76 76 chr15 11680097 11680159 -91814815 + Lx7 LINE L1 7465 7529 -167 2 674 1138 54 0 33 chr15 11680159 11680171 -91814803 - B1_Mus2 SINE Alu 0 147 139 2 674 321 26 0 0 chr15 11680171 11680209 -91814765 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2 674 1138 54 0 33 chr15 11680209 11680348 -91814626 - B1_Mus2 SINE Alu -9 138 1 2 674 1509 151 76 76 chr15 11680348 11680514 -91814460 + Lx7 LINE L1 7530 7696 0 2 674 876 120 25 0 chr15 11681076 11681234 -91813740 + (GGAA)n Simple_repeat Simple_repeat 2 163 0 2 674 330 176 0 0 chr15 11681863 11681948 -91813026 + (CA)n Simple_repeat Simple_repeat 1 85 0 2 674 513 0 0 0 chr15 11681948 11682005 -91812969 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 674 23 0 0 0 chr15 11682128 11682151 -91812823 + AT_rich Low_complexity Low_complexity 1 23 0 2 674 1344 165 4 18 chr15 11682344 11682572 -91812402 - URR1A DNA MER1_type 0 226 2 2 674 180 0 0 0 chr15 11682697 11682717 -91812257 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 2 674 872 266 82 7 chr15 11684273 11684542 -91810432 + B4A SINE B4 2 290 -2 2 674 279 192 0 0 chr15 11684542 11684620 -91810354 + (CA)n Simple_repeat Simple_repeat 2 79 0 2 674 231 261 15 0 chr15 11684633 11684698 -91810276 + (CA)n Simple_repeat Simple_repeat 1 66 0 2 674 1566 178 50 9 chr15 11686078 11686401 -91808573 + MTD LTR MaLR 1 336 -83 2 674 222 183 0 0 chr15 11686438 11686509 -91808465 + A-rich Low_complexity Low_complexity 1 71 0 2 674 474 226 128 0 chr15 11687345 11687447 -91807527 + PB1D7 SINE Alu 1 115 -5 2 674 2378 76 31 0 chr15 11687556 11687873 -91807101 - ORR1A2 LTR MaLR 0 327 1 2 674 1522 97 4 20 chr15 11687873 11688126 -91806848 - ORR1A2-int LTR MaLR 0 1963 1715 2 674 5199 147 83 19 chr15 11688116 11689200 -91805774 + ORR1A3-int LTR MaLR 277 1429 -534 2 674 862 114 0 0 chr15 11689195 11689327 -91805647 - ORR1A2 LTR MaLR -195 132 1 2 674 224 159 47 33 chr15 11689351 11689501 -91805473 + (TTATA)n Simple_repeat Simple_repeat 1 152 0 2 674 270 0 0 0 chr15 11689887 11689917 -91805057 + (TTG)n Simple_repeat Simple_repeat 1 30 0 2 674 2002 71 0 0 chr15 11690053 11690306 -91804668 + L1_Mus2 LINE L1 6314 6566 0 2 674 269 298 97 66 chr15 11690331 11690658 -91804316 + MTE2a LTR MaLR 11 302 -117 2 674 240 172 69 0 chr15 11690736 11690794 -91804180 - Lx2 LINE L1 -2 6995 6934 3 674 804 259 0 81 chr15 11690770 11691037 -91803937 + Lx2B LINE L1 6682 6917 -80 3 674 274 279 68 68 chr15 11691505 11691651 -91803323 - Lx9 LINE L1 -545 7099 6954 3 674 1022 198 127 46 chr15 11692334 11692641 -91802333 + IAPEY3_LTR LTR ERVK 1 332 0 3 674 567 293 59 78 chr15 11692782 11693052 -91801922 + B4A SINE B4 28 292 0 3 674 336 310 10 0 chr15 11693052 11693152 -91801822 + (CA)n Simple_repeat Simple_repeat 1 101 0 3 674 4121 149 53 6 chr15 11693152 11693872 -91801102 + L1_Mur2 LINE L1 4352 5105 -772 3 674 3991 106 9 3 chr15 11693872 11694440 -91800534 + Lx2A LINE L1 6437 7007 -1 3 674 1008 202 57 9 chr15 11694799 11695009 -91799965 - URR1B DNA MER1_type 0 225 6 3 674 261 0 0 0 chr15 11695137 11695166 -91799808 + (TC)n Simple_repeat Simple_repeat 2 30 0 3 674 423 0 0 0 chr15 11695166 11695212 -91799762 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 674 251 302 0 0 chr15 11695443 11695506 -91799468 - L1MC4 LINE L1 -150 7892 7830 3 674 389 279 0 9 chr15 11695507 11695619 -91799355 - PB1D10 SINE Alu -6 111 1 3 674 369 62 0 0 chr15 11696761 11696809 -91798165 + (TATG)n Simple_repeat Simple_repeat 1 48 0 3 674 701 281 38 48 chr15 11696849 11697141 -91797833 - B4A SINE B4 -1 291 3 3 674 1191 68 0 0 chr15 11697717 11697864 -91797110 + B1_Mus2 SINE Alu 1 147 0 3 674 424 252 219 68 chr15 11698116 11698367 -91796607 - B4A SINE B4 -1 291 3 3 674 311 326 41 101 chr15 11698573 11698791 -91796183 + MIRb SINE MIR 50 254 -14 3 674 1059 62 0 0 chr15 11699006 11699135 -91795839 - L1_Mus1 LINE L1 -349 6218 6090 3 674 2954 45 0 0 chr15 11699135 11699488 -91795486 + L1_Mus1 LINE L1 6213 6565 -2 3 674 996 286 94 16 chr15 11700978 11701362 -91793612 + MTD LTR MaLR 6 419 0 3 674 364 326 242 13 chr15 11702248 11702492 -91792482 - MLT1F LTR MaLR -184 364 65 3 674 217 292 89 37 chr15 11702792 11702927 -91792047 - L2c LINE L2 -1 3386 3245 3 674 184 330 10 49 chr15 11703206 11703308 -91791666 - L2c LINE L2 -331 3095 2998 3 674 474 134 1 0 chr15 11704972 11705066 -91789908 - L1_Mus1 LINE L1 -1 6581 6485 3 674 216 67 0 0 chr15 11705920 11705950 -91789024 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 674 866 230 19 24 chr15 11706069 11706274 -91788700 + B3 SINE B2 13 216 0 3 674 753 295 126 24 chr15 11706309 11706819 -91788155 + L1M4 LINE L1 4399 4960 -1186 3 674 608 310 71 76 chr15 11706849 11707216 -91787758 + MLT1A LTR MaLR 6 370 -4 3 674 456 231 123 8 chr15 11707312 11707434 -91787540 - ID_B1 SINE B4 0 224 89 3 674 571 226 65 41 chr15 11707445 11707690 -91787284 + L1M4 LINE L1 5024 5274 -872 3 674 1417 150 11 26 chr15 11707817 11708084 -91786890 + ORR1B1 LTR MaLR 1 263 -131 3 674 1241 255 57 8 chr15 11709319 11709702 -91785272 - BGLII_B LTR ERVK -25 416 15 3 674 349 348 64 43 chr15 11711123 11711297 -91783677 + MLT1B LTR MaLR 1 185 -205 3 674 805 45 18 0 chr15 11711297 11711407 -91783567 + (TC)n Simple_repeat Simple_repeat 1 112 0 3 674 349 348 64 43 chr15 11711407 11711514 -91783460 + MLT1B LTR MaLR 186 288 -102 3 674 459 52 0 0 chr15 11711849 11711907 -91783067 + (TTA)n Simple_repeat Simple_repeat 1 58 0 3 674 429 54 0 0 chr15 11712003 11712059 -91782915 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 674 687 25 0 0 chr15 11712059 11712139 -91782835 + (GA)n Simple_repeat Simple_repeat 1 81 0 3 674 425 228 40 16 chr15 11712139 11712264 -91782710 - B1F SINE Alu -21 128 1 3 674 364 319 82 20 chr15 11712267 11712414 -91782560 + MER5A DNA MER1_type 1 156 -33 3 674 187 54 54 0 chr15 11712665 11712702 -91782272 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 674 365 123 0 0 chr15 11712735 11712800 -91782174 - L1Md_F2 LINE L1 0 6582 6518 3 674 747 105 23 0 chr15 11713087 11713220 -91781754 + (TCTA)n Simple_repeat Simple_repeat 1 136 0 3 674 490 278 43 103 chr15 11713220 11713443 -91781531 - ID_B1 SINE B4 -13 211 3 3 674 4855 215 64 28 chr15 11715342 11716657 -91778317 - RMER1A Other Other -12 1018 25 3 674 1400 68 0 2 chr15 11717136 11717656 -91777318 + (TGG)n Simple_repeat Simple_repeat 1 518 0 3 674 492 284 98 30 chr15 11717720 11717985 -91776989 + Lx8 LINE L1 7105 7387 -86 3 674 3312 261 104 9 chr15 11718217 11719206 -91775768 - Lx8 LINE L1 -38 7435 6353 3 674 281 227 40 0 chr15 11719483 11719558 -91775416 + L1MB2 LINE L1 5150 5227 -913 3 674 861 277 158 10 chr15 11719556 11719961 -91775013 + L1MB2 LINE L1 5657 6121 -50 3 674 247 315 8 92 chr15 11719965 11720084 -91774890 + MTE2a LTR MaLR 229 337 -42 3 674 818 161 214 5 chr15 11720142 11720329 -91774645 - URR1A DNA MER1_type 0 226 1 3 674 292 337 52 67 chr15 11720452 11720646 -91774328 - MLT1E3 LTR MaLR -126 498 308 3 674 1102 210 188 21 chr15 11721299 11721635 -91773339 + MTD LTR MaLR 1 392 -27 3 674 22 70 0 0 chr15 11721752 11721795 -91773179 + AT_rich Low_complexity Low_complexity 1 43 0 3 674 846 70 0 0 chr15 11721832 11721947 -91773027 + B1_Mus2 SINE Alu 33 147 0 3 674 321 135 0 0 chr15 11721947 11721999 -91772975 + (A)n Simple_repeat Simple_repeat 1 52 0 3 674 189 0 0 0 chr15 11722012 11722033 -91772941 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 674 1530 208 48 43 chr15 11722898 11723270 -91771704 - ORR1D1 LTR MaLR 0 374 1 3 674 1862 172 54 30 chr15 11723459 11723830 -91771144 + MTB_Mm LTR MaLR 27 406 -1 3 674 213 301 116 14 chr15 11723896 11724034 -91770940 - MIR SINE MIR -18 244 93 3 674 482 165 40 17 chr15 11725329 11725502 -91769472 + (TA)n Simple_repeat Simple_repeat 2 178 0 3 674 227 337 33 22 chr15 11727301 11727392 -91767582 + B1F1 SINE Alu 7 98 -51 3 674 628 282 14 28 chr15 11727472 11727715 -91767259 - MLT1B LTR MaLR 0 408 172 3 674 460 326 5 40 chr15 11727757 11727955 -91767019 - MLT1B LTR MaLR -183 191 1 3 674 270 0 0 0 chr15 11727995 11728025 -91766949 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 674 639 148 0 0 chr15 11728025 11728160 -91766814 + (GA)n Simple_repeat Simple_repeat 2 136 0 3 674 250 260 250 0 chr15 11729289 11729389 -91765585 + L2a LINE L2 3285 3409 -17 3 674 269 51 0 25 chr15 11732547 11732587 -91762387 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 3 674 186 267 0 0 chr15 11732743 11732833 -91762141 + (CA)n Simple_repeat Simple_repeat 1 90 0 3 674 301 345 0 11 chr15 11732971 11733150 -91761824 + (CA)n Simple_repeat Simple_repeat 1 177 0 3 674 201 178 0 0 chr15 11733262 11733307 -91761667 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 674 225 0 0 0 chr15 11733404 11733429 -91761545 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 674 605 267 25 45 chr15 11734267 11734424 -91760550 + RSINE1 SINE B4 12 165 0 3 674 390 129 0 0 chr15 11734492 11734554 -91760420 + (TG)n Simple_repeat Simple_repeat 2 63 0 3 674 1164 298 154 2 chr15 11734767 11735214 -91759760 + Lx7 LINE L1 6801 7315 -381 3 674 280 158 284 17 chr15 11735269 11735385 -91759589 + Lx7 LINE L1 7577 7677 -19 3 674 460 269 87 31 chr15 11735841 11736002 -91758972 - ID_B1 SINE B4 -53 171 2 3 674 223 177 32 16 chr15 11736190 11736253 -91758721 + (TA)n Simple_repeat Simple_repeat 1 64 0 3 674 407 233 108 14 chr15 11736628 11736776 -91758198 + MER53 DNA hAT 3 164 -29 3 674 283 179 0 0 chr15 11737002 11737058 -91757916 + L1_Mur3 LINE L1 3127 3182 -2695 3 674 2358 74 0 0 chr15 11737065 11737361 -91757613 - L1_Mus3 LINE L1 -461 6175 5880 3 674 2812 99 92 0 chr15 11737361 11737787 -91757187 + L1_Mus3 LINE L1 6174 6638 0 3 674 3940 178 19 31 chr15 11737837 11738612 -91756362 + L1_Mur3 LINE L1 4775 5540 -340 3 674 762 212 123 10 chr15 11738606 11738801 -91756173 - Lx7 LINE L1 -469 7227 7011 3 674 618 266 106 67 chr15 11738801 11739101 -91755873 + Lx8 LINE L1 6822 7266 -378 3 674 396 0 0 0 chr15 11739348 11739392 -91755582 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 674 24 0 0 0 chr15 11740555 11740579 -91754395 + AT_rich Low_complexity Low_complexity 1 24 0 3 674 879 238 59 0 chr15 11740582 11740784 -91754190 - B3 SINE B2 -2 214 1 3 674 340 317 47 20 chr15 11740932 11741080 -91753894 - MER5A1 DNA MER1_type -6 160 9 3 674 24 0 0 0 chr15 11741106 11741130 -91753844 + AT_rich Low_complexity Low_complexity 1 24 0 3 674 278 204 30 10 chr15 11742945 11743044 -91751930 + GA-rich Low_complexity Low_complexity 1 101 0 3 674 341 215 64 27 chr15 11744184 11744294 -91750680 - Lx9 LINE L1 0 7644 7531 3 674 322 381 9 0 chr15 11744389 11744494 -91750480 - B4A SINE B4 -153 139 34 3 674 522 118 0 0 chr15 11746476 11746569 -91748405 + (TC)n Simple_repeat Simple_repeat 1 93 0 3 674 456 19 0 0 chr15 11746569 11746622 -91748352 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 674 270 139 153 0 chr15 11746948 11747020 -91747954 + MLT1K LTR MaLR 513 595 0 3 674 261 0 0 0 chr15 11747090 11747119 -91747855 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 674 25 51 0 0 chr15 11747313 11747352 -91747622 + AT_rich Low_complexity Low_complexity 1 39 0 3 674 243 395 108 14 chr15 11747411 11747624 -91747350 - LTR81C LTR ERV1? -285 868 636 3 674 489 334 142 18 chr15 11747671 11748177 -91746797 - MER92B LTR ERV1 -57 579 11 3 674 27 0 0 0 chr15 11748620 11748647 -91746327 + AT_rich Low_complexity Low_complexity 1 27 0 3 674 1661 234 60 36 chr15 11748647 11749063 -91745911 - Lx5 LINE L1 0 7050 6625 3 674 816 307 46 25 chr15 11749069 11749353 -91745621 + Lx8 LINE L1 6936 7225 -248 3 674 596 157 70 0 chr15 11749481 11749596 -91745378 - Lx9 LINE L1 -217 7427 7305 3 674 352 281 18 0 chr15 11749744 11749858 -91745116 + ID_B1 SINE B4 1 116 -108 3 674 214 49 0 118 chr15 11749890 11749983 -91744991 + (CAT)n Simple_repeat Simple_repeat 2 83 0 3 674 298 129 97 0 chr15 11750006 11750068 -91744906 - MTD LTR MaLR -284 135 68 3 674 183 184 0 0 chr15 11750198 11750236 -91744738 + T-rich Low_complexity Low_complexity 1 38 0 4 674 990 56 0 34 chr15 11750236 11750251 -91744723 - B1_Mus1 SINE Alu 0 148 136 4 674 392 0 0 20 chr15 11750251 11750300 -91744674 + (TTTTG)n Simple_repeat Simple_repeat 1 48 0 4 674 990 56 0 34 chr15 11750300 11750431 -91744543 - B1_Mus1 SINE Alu -13 135 7 4 674 272 199 73 60 chr15 11750327 11750477 -91744497 - ORR1B1-int LTR MaLR -755 754 603 4 674 13603 71 19 6 chr15 11750477 11752169 -91742805 - L1_Mus2 LINE L1 -34 6532 4820 4 674 3923 121 31 57 chr15 11752169 11752940 -91742034 + RMER17A LTR ERVK 1 751 0 4 674 13603 90 4 4 chr15 11752940 11753723 -91741251 - L1_Mus2 LINE L1 -1064 4819 4034 4 674 643 345 35 60 chr15 11754050 11754385 -91740589 + MLT1E1A LTR MaLR 326 674 -6 4 674 193 228 0 0 chr15 11754534 11754580 -91740394 + MIRm SINE MIR 104 155 -121 4 674 2877 77 43 13 chr15 11754842 11755237 -91739737 - MTB_Mm LTR MaLR 0 407 1 4 674 24 85 0 0 chr15 11756150 11756209 -91738765 + AT_rich Low_complexity Low_complexity 1 59 0 4 674 250 333 78 0 chr15 11756563 11756653 -91738321 - MER52-int LTR ERV1 -2558 4533 4437 4 674 474 18 0 0 chr15 11757017 11757072 -91737902 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 674 650 271 64 17 chr15 11757127 11757300 -91737674 - ID_B1 SINE B4 -6 218 38 4 674 386 295 68 59 chr15 11757395 11757615 -91737359 - MTEb LTR MaLR -157 222 1 4 674 270 377 25 0 chr15 11757652 11757811 -91737163 + L2 LINE L2 2345 2507 -912 4 674 320 257 173 26 chr15 11757960 11758116 -91736858 - MLT1L LTR MaLR -5 605 427 4 674 733 323 72 33 chr15 11759255 11759609 -91735365 + L1MB2 LINE L1 5440 5800 -371 4 674 264 30 0 0 chr15 11759609 11759642 -91735332 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 4 674 733 323 72 33 chr15 11759642 11759771 -91735203 + L1MB2 LINE L1 5801 5942 -229 4 674 459 0 0 0 chr15 11761278 11761329 -91733645 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 4 674 341 278 65 47 chr15 11762804 11762974 -91732000 - MER63D DNA AcHobo -866 195 23 4 674 907 289 0 8 chr15 11763298 11763532 -91731442 + B4A SINE B4 1 232 -60 4 674 543 259 0 0 chr15 11763528 11763644 -91731330 + RSINE1 SINE B4 29 144 -21 4 674 279 246 0 80 chr15 11763669 11763744 -91731230 + B4A SINE B4 224 292 0 4 674 533 88 12 0 chr15 11764543 11764623 -91730351 + (TG)n Simple_repeat Simple_repeat 1 81 0 4 674 430 321 76 84 chr15 11764644 11764919 -91730055 - B4A SINE B4 -19 273 1 4 674 519 17 0 0 chr15 11765497 11765557 -91729417 + (GGGGA)n Simple_repeat Simple_repeat 1 60 0 4 674 374 221 58 0 chr15 11765559 11765645 -91729329 + ID_B1 SINE B4 134 224 0 4 674 402 273 37 105 chr15 11766875 11767170 -91727804 - Lx9 LINE L1 0 7644 7370 4 674 1180 152 5 10 chr15 11769151 11769357 -91725617 + Lx4B LINE L1 6850 7054 -4 4 674 216 0 0 0 chr15 11769809 11769833 -91725141 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 674 315 0 0 0 chr15 11771436 11771471 -91723503 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 674 737 231 0 13 chr15 11772404 11772553 -91722421 - B1F2 SINE Alu -1 148 2 4 674 196 53 53 0 chr15 11772614 11772652 -91722322 + (TAA)n Simple_repeat Simple_repeat 1 40 0 4 674 232 175 27 72 chr15 11776240 11776351 -91718623 + (TATAA)n Simple_repeat Simple_repeat 1 106 0 4 674 339 265 43 0 chr15 11776434 11776539 -91718435 + B1F1 SINE Alu 1 109 -40 4 674 2969 41 8 5 chr15 11777196 11777563 -91717411 + L1Md_F3 LINE L1 6203 6570 -14 4 674 24 53 0 0 chr15 11777761 11777799 -91717175 + AT_rich Low_complexity Low_complexity 1 38 0 4 674 3719 63 46 6 chr15 11778606 11779087 -91715887 + L1Md_F2 LINE L1 6064 6563 -19 4 674 189 0 0 0 chr15 11779207 11779228 -91715746 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 4 674 466 245 71 130 chr15 11779473 11779642 -91715332 + RSINE1 SINE B4 7 165 0 4 674 333 0 0 0 chr15 11779651 11779688 -91715286 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 674 180 0 0 0 chr15 11780220 11780240 -91714734 + (G)n Simple_repeat Simple_repeat 1 20 0 4 674 1192 94 0 11 chr15 11780587 11780770 -91714204 + B2_Mm2 SINE B2 15 195 0 4 674 586 224 82 0 chr15 11781925 11782059 -91712915 + RSINE1 SINE B4 2 146 -19 4 674 648 86 0 0 chr15 11782069 11782174 -91712800 + (GA)n Simple_repeat Simple_repeat 2 106 0 4 674 225 237 0 0 chr15 11782361 11782420 -91712554 - MER46C DNA MER2_type -16 322 264 4 674 212 211 0 14 chr15 11783481 11783553 -91711421 + (TA)n Simple_repeat Simple_repeat 1 71 0 4 674 232 280 0 26 chr15 11785581 11785658 -91709316 + L2a LINE L2 3347 3421 -5 4 674 668 199 98 15 chr15 11785773 11785838 -91709136 + Lx9 LINE L1 7400 7475 -169 4 674 306 0 0 0 chr15 11785838 11785872 -91709102 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 674 668 199 98 15 chr15 11785872 11786010 -91708964 + Lx9 LINE L1 7476 7619 -25 4 674 986 112 180 0 chr15 11786173 11786334 -91708640 + B2_Mm2 SINE B2 1 190 -5 4 674 397 263 35 9 chr15 11786454 11786569 -91708405 + B1F2 SINE Alu 1 118 -31 4 674 918 298 51 4 chr15 11787254 11787510 -91707464 + B4A SINE B4 2 269 -23 4 674 426 39 0 0 chr15 11787510 11787562 -91707412 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 674 1125 229 49 0 chr15 11787715 11787959 -91707015 - Lx5 LINE L1 -292 6758 6503 4 674 957 287 38 16 chr15 11787959 11788278 -91706696 + Lx6 LINE L1 7133 7458 -2 4 674 325 256 0 68 chr15 11788946 11789034 -91705940 + PB1D10 SINE Alu 36 117 0 4 674 284 234 205 19 chr15 11790371 11790532 -91704442 + MIR SINE MIR 39 229 -33 4 674 231 283 29 39 chr15 11790856 11790959 -91704015 + MIRc SINE MIR 104 205 -63 4 674 433 299 29 29 chr15 11791358 11791496 -91703478 + Lx8 LINE L1 7173 7310 -163 4 674 373 192 10 20 chr15 11791646 11791747 -91703227 + CT-rich Low_complexity Low_complexity 2 101 0 4 674 854 290 36 95 chr15 11792534 11792892 -91702082 - MTE2b LTR MaLR -31 348 12 4 674 591 302 126 19 chr15 11793884 11794147 -91700827 + B4A SINE B4 2 292 0 4 674 582 15 0 0 chr15 11795014 11795081 -91699893 + (GA)n Simple_repeat Simple_repeat 2 68 0 4 674 248 324 122 5 chr15 11795489 11795703 -91699271 + LTR33 LTR ERVL 277 515 0 4 674 328 300 27 60 chr15 11795961 11796110 -91698864 - Tigger15a DNA TcMar -386 329 186 4 674 315 268 61 20 chr15 11796130 11796229 -91698745 + PB1 SINE Alu 23 125 -2 4 675 330 353 81 20 chr15 11796625 11796972 -91698002 + L1M5 LINE L1 4765 5132 -1014 4 675 203 244 0 0 chr15 11798045 11798090 -91696884 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 675 839 309 26 48 chr15 11798097 11798410 -91696564 - MTE2a LTR MaLR -73 306 1 4 675 1368 230 67 17 chr15 11798439 11798797 -91696177 - Lx9 LINE L1 -1 7643 7268 4 675 662 200 74 20 chr15 11798796 11798944 -91696030 + Lx9 LINE L1 7103 7258 -386 4 675 186 43 0 0 chr15 11802545 11802568 -91692406 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 675 486 0 0 0 chr15 11802569 11802623 -91692351 + (CATATA)n Simple_repeat Simple_repeat 4 57 0 4 675 395 379 22 50 chr15 11802721 11802999 -91691975 + B4 SINE B4 1 270 -22 4 675 300 297 41 55 chr15 11803100 11803246 -91691728 + B1F1 SINE Alu 6 149 0 4 675 210 288 0 33 chr15 11803249 11803310 -91691664 + BC1_Mm scRNA scRNA 2 60 -92 4 675 672 219 0 23 chr15 11803321 11803579 -91691395 + (CATA)n Simple_repeat Simple_repeat 1 251 0 4 675 450 0 0 0 chr15 11803774 11803824 -91691150 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 4 675 640 256 240 27 chr15 11804193 11804414 -91690560 + B4 SINE B4 2 269 -23 4 675 3002 45 45 16 chr15 11805310 11805691 -91689283 + MTA_Mm LTR MaLR 1 392 -4 4 675 514 318 8 0 chr15 11805691 11805823 -91689151 - B1F1 SINE Alu -12 137 5 4 675 432 301 30 0 chr15 11806071 11806204 -91688770 + B1F SINE Alu 1 137 -12 4 675 180 293 50 62 chr15 11808253 11808333 -91686641 + MIRm SINE MIR 2 80 -196 4 675 441 0 0 0 chr15 11808788 11808837 -91686137 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 4 675 1376 141 60 167 chr15 11809120 11809503 -91685471 - ORR1C2 LTR MaLR -42 342 1 4 675 643 277 7 7 chr15 11809571 11809720 -91685254 + ID_B1 SINE B4 76 224 0 4 675 237 283 132 0 chr15 11809767 11809873 -91685101 + L1MD2 LINE L1 6101 6220 -139 4 675 282 116 0 0 chr15 11809876 11809919 -91685055 + (TAA)n Simple_repeat Simple_repeat 3 45 0 4 675 260 320 48 90 chr15 11810017 11810285 -91684689 - Lx8 LINE L1 -2 7471 7215 4 675 25 0 0 0 chr15 11810295 11810320 -91684654 + AT_rich Low_complexity Low_complexity 1 25 0 4 675 766 281 44 52 chr15 11810375 11810656 -91684318 + B4A SINE B4 1 288 -4 4 675 192 171 39 13 chr15 11811277 11811354 -91683620 + (TTTAA)n Simple_repeat Simple_repeat 2 80 0 4 675 198 0 0 0 chr15 11811797 11811819 -91683155 + (A)n Simple_repeat Simple_repeat 1 22 0 4 675 262 67 44 0 chr15 11813590 11813635 -91681339 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 4 675 594 131 0 0 chr15 11813948 11814070 -91680904 + (TAGA)n Simple_repeat Simple_repeat 3 124 0 4 675 265 261 58 0 chr15 11814158 11814227 -91680747 - MIR SINE MIR -111 151 79 4 675 417 123 0 0 chr15 11815200 11815265 -91679709 + (TTC)n Simple_repeat Simple_repeat 3 67 0 4 675 526 342 10 0 chr15 11815492 11815685 -91679289 - B3A SINE B2 -3 195 1 4 675 1674 57 0 0 chr15 11815960 11816170 -91678804 + L1Md_T LINE L1 6373 6582 0 4 675 446 120 0 13 chr15 11816709 11816785 -91678189 + (TC)n Simple_repeat Simple_repeat 2 76 0 4 675 341 252 6 100 chr15 11817406 11817532 -91677442 - MER3 DNA MER1_type -49 160 41 4 675 246 302 75 0 chr15 11817540 11817646 -91677328 + PB1D7 SINE Alu 1 114 -6 5 675 392 19 39 0 chr15 11817695 11817747 -91677227 + (GGGA)n Simple_repeat Simple_repeat 2 55 0 5 675 229 228 53 0 chr15 11817926 11817983 -91676991 + MTE2a LTR MaLR 3 62 -317 5 675 270 303 53 83 chr15 11817995 11818128 -91676846 + MTE2a LTR MaLR 125 253 -126 5 675 306 0 0 0 chr15 11818190 11818224 -91676750 + (TCTG)n Simple_repeat Simple_repeat 1 34 0 5 675 266 296 103 74 chr15 11818243 11818418 -91676556 - B3 SINE B2 -35 181 2 5 675 25 0 0 0 chr15 11818571 11818596 -91676378 + AT_rich Low_complexity Low_complexity 1 25 0 5 675 1053 172 113 5 chr15 11819836 11820040 -91674934 + URR1A DNA MER1_type 1 226 0 5 675 648 247 160 5 chr15 11821241 11821428 -91673546 + B3 SINE B2 1 216 0 5 675 24 0 0 0 chr15 11821487 11821511 -91673463 + AT_rich Low_complexity Low_complexity 1 24 0 5 675 596 215 54 0 chr15 11821525 11821655 -91673319 + B1_Mur2 SINE Alu 3 139 -10 5 675 297 0 0 0 chr15 11821655 11821688 -91673286 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 5 675 30 45 0 0 chr15 11821707 11821751 -91673223 + AT_rich Low_complexity Low_complexity 1 44 0 5 675 962 186 13 99 chr15 11821762 11821995 -91672979 + B3 SINE B2 4 216 0 5 675 390 292 41 7 chr15 11822034 11822179 -91672795 + RSINE1 SINE B4 16 165 0 5 675 345 139 44 50 chr15 11822197 11822378 -91672596 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 675 218 139 41 14 chr15 11822396 11822469 -91672505 + (CA)n Simple_repeat Simple_repeat 1 75 0 5 675 381 148 56 7 chr15 11822486 11822629 -91672345 + (CA)n Simple_repeat Simple_repeat 1 150 0 5 675 429 140 29 14 chr15 11822648 11822786 -91672188 + (CA)n Simple_repeat Simple_repeat 1 140 0 5 675 330 26 0 0 chr15 11822791 11822830 -91672144 + (TC)n Simple_repeat Simple_repeat 1 39 0 5 675 395 19 0 19 chr15 11822830 11822882 -91672092 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 675 276 297 75 79 chr15 11822990 11823217 -91671757 + L1MC4 LINE L1 5511 5736 -2146 5 675 1034 205 19 5 chr15 11824200 11824411 -91670563 + B3 SINE B2 1 214 -2 5 675 2360 59 0 0 chr15 11824439 11824729 -91670245 + L1_Mus1 LINE L1 6278 6567 0 5 675 711 278 103 42 chr15 11825691 11826003 -91668971 - MER44A DNA MER2_type -3 336 6 5 675 340 311 71 74 chr15 11826144 11826481 -91668493 + L1MC4 LINE L1 7488 7823 -219 5 675 547 251 212 0 chr15 11826498 11826677 -91668297 + ID_B1 SINE B4 5 221 -3 5 675 366 361 63 33 chr15 11827739 11828004 -91666970 - MamRep605 Unknown Unknown -290 586 311 5 675 495 0 0 0 chr15 11828004 11828059 -91666915 + (TCC)n Simple_repeat Simple_repeat 3 57 0 5 675 366 361 63 33 chr15 11828059 11828128 -91666846 - MamRep605 Unknown Unknown -566 310 242 5 675 549 0 0 0 chr15 11828251 11828312 -91666662 + (GAAA)n Simple_repeat Simple_repeat 4 64 0 5 675 381 317 123 5 chr15 11828485 11828688 -91666286 - Tigger13a DNA MER2_type -356 415 189 5 675 372 212 211 41 chr15 11828870 11828993 -91665981 - B1F2 SINE Alu -3 146 3 5 675 649 185 327 18 chr15 11829502 11829667 -91665307 + B3 SINE B2 1 216 0 5 675 339 206 0 0 chr15 11829810 11829873 -91665101 + HAL1 LINE L1 1268 1330 -1177 5 675 3563 175 49 3 chr15 11829873 11830544 -91664430 + Lx4B LINE L1 5927 6628 -430 5 675 480 252 9 26 chr15 11831096 11831210 -91663764 - PB1D10 SINE Alu -1 116 5 5 675 432 82 0 0 chr15 11831221 11831282 -91663692 + (TATG)n Simple_repeat Simple_repeat 4 64 0 5 675 220 319 84 24 chr15 11832344 11832511 -91662463 - MIR SINE MIR -23 239 63 5 675 28 0 0 0 chr15 11835579 11835607 -91659367 + AT_rich Low_complexity Low_complexity 1 28 0 5 675 212 93 0 44 chr15 11835956 11836001 -91658973 + (GGGTG)n Simple_repeat Simple_repeat 3 45 0 5 675 198 0 0 0 chr15 11836213 11836235 -91658739 + (A)n Simple_repeat Simple_repeat 1 22 0 5 675 1218 73 6 11 chr15 11837280 11837461 -91657513 + (TTC)n Simple_repeat Simple_repeat 1 180 0 5 675 1177 89 60 27 chr15 11838603 11838787 -91656187 - B2_Mm1t SINE B2 -3 190 1 5 675 401 320 0 38 chr15 11840388 11840521 -91654453 + RSINE1 SINE B4 3 130 -35 5 675 270 116 0 0 chr15 11840526 11840569 -91654405 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 675 317 125 0 18 chr15 11841021 11841078 -91653896 + (CTTG)n Simple_repeat Simple_repeat 1 56 0 5 675 402 283 38 0 chr15 11841078 11841184 -91653790 - PB1D10 SINE Alu -6 111 2 5 675 357 322 73 58 chr15 11841813 11842007 -91652967 + Lx8 LINE L1 7154 7345 -128 5 675 387 0 0 0 chr15 11842007 11842050 -91652924 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 675 635 25 0 12 chr15 11842050 11842131 -91652843 + (GA)n Simple_repeat Simple_repeat 1 81 0 5 675 357 322 73 58 chr15 11842131 11842248 -91652726 + Lx8 LINE L1 7346 7470 -3 5 675 1192 57 0 0 chr15 11842266 11842407 -91652567 + B1_Mm SINE Alu 1 141 -6 5 675 1930 211 3 3 chr15 11842427 11842784 -91652190 + Lx9 LINE L1 6694 7050 -594 5 675 710 220 43 19 chr15 11842784 11842946 -91652028 + Lx9 LINE L1 7305 7470 -174 5 675 414 0 0 0 chr15 11842957 11843003 -91651971 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 675 387 161 34 43 chr15 11843010 11843127 -91651847 + Lx9 LINE L1 7529 7644 0 5 675 186 43 0 0 chr15 11843881 11843904 -91651070 + (TTTC)n Simple_repeat Simple_repeat 1 23 0 5 675 2028 287 42 54 chr15 11844815 11845485 -91649489 - Lx8 LINE L1 -190 7283 6622 5 675 240 251 153 105 chr15 11845632 11845869 -91649105 - RLTR41 LTR ERV1 -56 476 258 5 675 2646 46 60 18 chr15 11846067 11846399 -91648575 + ORR1A1 LTR MaLR 1 346 0 5 675 4603 82 68 7 chr15 11846399 11847147 -91647827 + ORR1A1-int LTR MaLR 1 794 -998 5 675 2664 50 47 0 chr15 11847134 11847518 -91647456 + ORR1A1-int LTR MaLR 1391 1792 0 5 675 1928 53 84 21 chr15 11847518 11847805 -91647169 + ORR1A1 LTR MaLR 1 305 -41 5 675 33831 71 2 3 chr15 11847819 11853311 -91641663 + L1Md_F2 LINE L1 99 5586 -297 5 675 8463 36 1 1 chr15 11853311 11854307 -91640667 + L1Md_F2 LINE L1 5587 6582 0 5 675 449 18 0 0 chr15 11854340 11854395 -91640579 + ORR1A1 LTR MaLR 292 346 0 5 675 521 252 160 75 chr15 11854759 11854902 -91640072 - MER2 DNA MER2_type 0 345 177 5 675 1290 20 0 0 chr15 11854902 11855049 -91639925 + B1_Mus2 SINE Alu 1 147 0 5 675 521 252 160 75 chr15 11855049 11855223 -91639751 - MER2 DNA MER2_type -169 176 1 5 675 424 326 99 60 chr15 11855345 11855727 -91639247 - MLT1H2 LTR MaLR 0 489 93 5 675 1513 65 0 48 chr15 11855898 11856125 -91638849 + L1Md_F3 LINE L1 6369 6584 0 5 675 975 284 45 24 chr15 11856152 11856441 -91638533 + MTE2b LTR MaLR 51 345 -34 5 675 1030 265 75 38 chr15 11856823 11857247 -91637727 - Lx9 LINE L1 -25 7619 7180 5 675 284 205 83 71 chr15 11857373 11857457 -91637517 + MLT1J LTR MaLR 225 309 -203 5 675 324 70 0 0 chr15 11859266 11859309 -91635665 + (T)n Simple_repeat Simple_repeat 1 43 0 5 675 423 150 62 0 chr15 11859309 11859389 -91635585 - B1_Mur2 SINE Alu 0 149 65 5 675 333 0 0 0 chr15 11859418 11859455 -91635519 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 675 1184 275 160 70 chr15 11859465 11860021 -91634953 + RMER1C Other Other 150 764 -578 5 675 509 235 0 34 chr15 11860021 11860140 -91634834 + MTD LTR MaLR 196 310 -109 5 675 716 306 38 19 chr15 11860277 11860540 -91634434 - Lx8 LINE L1 -1556 5917 5650 5 675 2790 12 0 0 chr15 11860540 11860878 -91634096 + ORR1A0 LTR MaLR 1 338 -8 5 675 14396 51 2 6 chr15 11860882 11862681 -91632293 + ORR1A0-int LTR MaLR 1 1792 0 5 675 3077 26 3 0 chr15 11862681 11863026 -91631948 + ORR1A0 LTR MaLR 1 346 0 5 675 3230 111 206 12 chr15 11864059 11864692 -91630282 + RMER6A LTR ERVK 1 756 0 5 675 644 244 134 41 chr15 11865195 11865464 -91629510 - MER31A LTR ERV1 -163 322 29 5 675 21 0 0 0 chr15 11865623 11865644 -91629330 + AT_rich Low_complexity Low_complexity 1 21 0 5 675 255 231 0 0 chr15 11865892 11865944 -91629030 - ID4_ SINE ID -31 52 1 5 675 194 405 37 31 chr15 11865983 11866146 -91628828 - MIRb SINE MIR -73 195 32 5 675 449 177 0 12 chr15 11866430 11866510 -91628464 + ID4 SINE ID 5 83 0 5 675 838 99 8 0 chr15 11866798 11866919 -91628055 + B2_Mm1t SINE B2 2 123 -70 5 675 825 37 0 0 chr15 11866941 11867049 -91627925 + B1_Mus1 SINE Alu 35 142 -6 5 675 323 366 52 10 chr15 11867767 11867960 -91627014 - MER74B LTR ERVL -3 619 419 5 675 198 191 0 0 chr15 11868358 11868400 -91626574 + (TTG)n Simple_repeat Simple_repeat 1 42 0 5 675 3883 159 81 40 chr15 11869909 11870841 -91624133 + RMER12 LTR ERVK 168 1144 -178 5 675 542 208 25 152 chr15 11871005 11871209 -91623765 + RMER12 LTR ERVK 1145 1322 0 5 675 226 330 11 33 chr15 11871209 11871297 -91623677 - MER2 DNA MER2_type -259 86 1 5 675 411 245 26 12 chr15 11873573 11873707 -91621267 - Lx7 LINE L1 -16 7680 7560 5 675 1893 147 46 22 chr15 11874095 11874214 -91620760 + ORR1C1 LTR MaLR 1 118 -260 5 675 2547 72 6 0 chr15 11874214 11874535 -91620439 + ORR1A2 LTR MaLR 5 327 0 5 675 1893 147 46 22 chr15 11874535 11874784 -91620190 + ORR1C1 LTR MaLR 119 378 0 5 675 21 0 0 0 chr15 11875069 11875090 -91619884 + AT_rich Low_complexity Low_complexity 1 21 0 5 675 195 336 23 62 chr15 11875276 11875406 -91619568 + MIRb SINE MIR 18 142 -126 5 675 320 250 130 31 chr15 11876968 11877129 -91617845 + L1MC4 LINE L1 6528 6704 -1338 5 675 345 218 0 0 chr15 11877162 11877240 -91617734 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 675 1938 122 20 0 chr15 11877240 11877544 -91617430 + ORR1A2 LTR MaLR 1 310 -17 5 675 487 183 92 34 chr15 11877873 11877992 -91616982 + L1MA5 LINE L1 5772 5897 -403 5 675 860 178 127 76 chr15 11877992 11878283 -91616691 + RLTR20C LTR ERVK 1 306 -228 5 675 641 231 0 39 chr15 11878293 11878446 -91616528 + RLTR20C LTR ERVK 432 578 0 5 675 355 254 31 39 chr15 11878446 11878573 -91616401 + L1MA5 LINE L1 5892 6017 -283 5 675 354 229 97 35 chr15 11878655 11878800 -91616174 + L1MA5 LINE L1 6143 6296 -4 5 675 705 141 7 94 chr15 11878873 11878898 -91616076 + B1_Mus1 SINE Alu 1 14 -134 5 675 1224 54 0 0 chr15 11878898 11879045 -91615929 - B1_Mus2 SINE Alu 0 147 1 5 675 818 122 8 0 chr15 11879045 11879168 -91615806 + B1_Mur2 SINE Alu 14 137 -12 5 675 3730 183 89 118 chr15 11879575 11880602 -91614372 - RMER1A Other Other -13 1017 45 5 675 2059 143 12 29 chr15 11880602 11881019 -91613955 - RMER17C LTR ERVK 0 410 1 5 675 1650 253 20 100 chr15 11881019 11881395 -91613579 - RMER1B Other Other -691 375 11 5 675 251 68 0 63 chr15 11881511 11881574 -91613400 + (TTTG)n Simple_repeat Simple_repeat 1 59 0 5 675 190 0 67 0 chr15 11881660 11881690 -91613284 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 5 675 230 308 118 15 chr15 11881819 11881954 -91613020 + MLT1D LTR MaLR 1 149 -356 5 675 494 223 338 14 chr15 11882372 11882656 -91612318 - MTE2b LTR MaLR 0 374 5 5 675 616 301 63 35 chr15 11882676 11882931 -91612043 + MLT1D LTR MaLR 225 486 -19 5 675 240 100 0 0 chr15 11883734 11883774 -91611200 + (TATG)n Simple_repeat Simple_repeat 1 40 0 5 675 302 343 35 0 chr15 11884405 11884548 -91610426 + MIR SINE MIR 102 249 -13 5 675 658 229 0 14 chr15 11884559 11884705 -91610269 + RSINE1 SINE B4 3 146 -19 6 675 285 232 39 69 chr15 11884790 11884892 -91610082 + MLT1D LTR MaLR 489 587 -8 5 675 2437 190 89 73 chr15 11886770 11887399 -91607575 + RLTR26 LTR ERVK 4 642 0 6 675 618 14 0 0 chr15 11887419 11887490 -91607484 + (GA)n Simple_repeat Simple_repeat 2 72 0 6 675 2432 93 12 0 chr15 11888013 11888336 -91606638 - ORR1A2 LTR MaLR 0 327 1 6 675 2783 214 98 3 chr15 11888390 11889033 -91605941 - Lx9 LINE L1 -5 7639 6936 6 675 34 55 0 0 chr15 11889907 11889962 -91605012 + AT_rich Low_complexity Low_complexity 1 55 0 6 675 297 0 0 0 chr15 11890012 11890045 -91604929 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 6 675 592 280 39 5 chr15 11890046 11890254 -91604720 - ID_B1 SINE B4 -8 216 2 6 675 775 207 128 91 chr15 11890431 11890864 -91604110 + MT2B LTR ERVL 1 546 -55 6 675 371 244 0 9 chr15 11890870 11890986 -91603988 + (CATATA)n Simple_repeat Simple_repeat 6 120 0 6 675 299 96 19 0 chr15 11892159 11892211 -91602763 + (TTTTTG)n Simple_repeat Simple_repeat 5 57 0 6 675 1181 62 7 0 chr15 11892212 11892358 -91602616 - B1_Mus1 SINE Alu -1 147 1 6 675 400 209 67 98 chr15 11892359 11892523 -91602451 + Tigger5 DNA MER2_type 2141 2299 -107 6 675 183 338 68 0 chr15 11893103 11893177 -91601797 + L2a LINE L2 3328 3406 -20 6 675 447 203 8 24 chr15 11893193 11893319 -91601655 + GA-rich Low_complexity Low_complexity 1 124 0 6 675 930 49 0 0 chr15 11894870 11894992 -91599982 + B1_Mus1 SINE Alu 27 148 0 6 675 458 206 0 11 chr15 11895077 11895170 -91599804 + 7SK RNA RNA 1 92 -239 6 675 311 218 141 0 chr15 11895189 11895267 -91599707 + 7SK RNA RNA 150 238 -93 6 675 348 250 53 0 chr15 11895329 11895405 -91599569 + RSINE1 SINE B4 69 148 -17 6 675 1264 76 41 0 chr15 11895523 11895694 -91599280 + B2_Mm1t SINE B2 2 179 -14 6 675 406 72 14 0 chr15 11895721 11895786 -91599188 + B2_Mm2 SINE B2 46 116 -82 6 675 33 43 0 0 chr15 11895793 11895840 -91599134 + AT_rich Low_complexity Low_complexity 1 47 0 6 675 769 147 81 0 chr15 11895938 11896074 -91598900 + B1_Mur4 SINE Alu 3 149 -1 6 675 338 231 120 0 chr15 11896602 11896719 -91598255 + ORR1D2 LTR MaLR 1 131 -239 6 675 277 269 53 64 chr15 11896919 11897090 -91597884 + ORR1D2 LTR MaLR 197 365 -14 6 675 654 177 239 16 chr15 11897152 11897336 -91597638 - URR1B DNA MER1_type 0 225 1 6 675 1293 236 53 25 chr15 11897380 11897736 -91597238 + ORR1D2 LTR MaLR 3 368 -2 6 675 2231 124 62 0 chr15 11897785 11898172 -91596802 - MTC LTR MaLR -10 411 1 6 675 445 198 47 0 chr15 11898198 11898284 -91596690 + PB1D9 SINE Alu 4 93 -27 6 675 360 0 0 0 chr15 11898292 11898332 -91596642 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 675 646 271 6 54 chr15 11898381 11898549 -91596425 + B3 SINE B2 1 160 -56 6 675 225 0 0 0 chr15 11898568 11898593 -91596381 + (T)n Simple_repeat Simple_repeat 1 25 0 6 675 237 33 0 0 chr15 11898755 11898785 -91596189 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 6 675 1067 114 78 17 chr15 11898854 11899033 -91595941 - B2_Mm2 SINE B2 -5 190 1 6 675 295 250 163 0 chr15 11899083 11899175 -91595799 - MER5A1 DNA MER1_type -10 156 50 6 675 1552 215 92 46 chr15 11899656 11900090 -91594884 - Lx9 LINE L1 -6 7638 7185 6 675 246 195 169 0 chr15 11900130 11900207 -91594767 + Charlie10 DNA MER1_type 1742 1831 -991 6 675 720 247 58 30 chr15 11900213 11900492 -91594482 + RLTR11B LTR ERVK 2 279 -162 6 675 392 241 48 41 chr15 11900582 11900729 -91594245 + RLTR11B LTR ERVK 284 431 -22 6 675 336 296 69 91 chr15 11900775 11901051 -91593923 + Charlie10 DNA MER1_type 2089 2347 -475 6 675 660 196 41 14 chr15 11901051 11901196 -91593778 - B1F SINE Alu 0 149 1 6 675 336 296 69 91 chr15 11901196 11901324 -91593650 + Charlie10 DNA MER1_type 2348 2484 -338 6 675 1537 42 0 30 chr15 11901366 11901563 -91593411 - B2_Mm1a SINE B2 -1 192 2 6 675 188 67 33 0 chr15 11901638 11901668 -91593306 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 675 243 0 0 0 chr15 11902029 11902056 -91592918 + (A)n Simple_repeat Simple_repeat 1 27 0 6 675 373 219 11 15 chr15 11902402 11902510 -91592464 + MTE2a LTR MaLR 274 379 0 6 675 315 325 26 0 chr15 11902672 11902786 -91592188 + PB1D10 SINE Alu 1 117 0 6 675 911 180 127 9 chr15 11902794 11903007 -91591967 - ORR1D1 LTR MaLR -136 238 1 6 675 778 255 53 0 chr15 11903504 11903692 -91591282 + ID_B1 SINE B4 22 219 -5 6 675 3247 148 106 3 chr15 11903707 11904351 -91590623 - RMER6D LTR ERVK -3 717 8 6 675 287 230 270 0 chr15 11905042 11905246 -91589728 + MLT2B1 LTR ERVL 191 449 -152 6 675 620 219 3 8 chr15 11905277 11905393 -91589581 + B1_Mur1 SINE Alu 14 131 -18 6 675 546 43 0 0 chr15 11905393 11905462 -91589512 + (TTGG)n Simple_repeat Simple_repeat 2 70 0 6 675 794 173 220 5 chr15 11906199 11906385 -91588589 - URR1A DNA MER1_type 0 226 1 6 675 210 280 117 50 chr15 11906636 11906759 -91588215 + MIR SINE MIR 20 149 -127 6 675 687 223 43 0 chr15 11907082 11907221 -91587753 + B1_Mur1 SINE Alu 3 147 -2 6 675 732 177 34 0 chr15 11908098 11908245 -91586729 + ORR1E LTR MaLR 1 152 -207 6 675 1170 265 203 90 chr15 11908402 11909170 -91585804 - Lx8 LINE L1 -499 6974 6120 6 675 413 281 33 94 chr15 11909232 11909444 -91585530 + ORR1E LTR MaLR 155 353 -6 6 675 1406 150 197 52 chr15 11910513 11910843 -91584131 + ORR1C1 LTR MaLR 1 378 0 6 675 1040 253 157 3 chr15 11911806 11912119 -91582855 + MTE2a LTR MaLR 19 379 0 6 675 505 269 122 27 chr15 11915498 11915720 -91579254 + MTEb LTR MaLR 3 245 -134 6 675 269 123 102 2 chr15 11915733 11915798 -91579176 + MTEb LTR MaLR 307 376 -3 6 675 367 310 182 32 chr15 11916426 11916679 -91578295 - B4A SINE B4 -1 291 1 6 675 576 273 173 28 chr15 11916953 11917236 -91577738 + L1MB2 LINE L1 5646 5969 -202 6 675 303 219 80 27 chr15 11917239 11917314 -91577660 + B1_Mur1 SINE Alu 37 115 -34 6 675 423 220 62 15 chr15 11917314 11917453 -91577521 + ORR1B1 LTR MaLR 1 132 -262 6 675 2304 119 52 40 chr15 11917478 11917924 -91577050 - RMER6B LTR ERVK -10 451 1 6 675 513 198 40 0 chr15 11917939 11918040 -91576934 + ORR1B1 LTR MaLR 133 237 -157 6 675 490 113 29 58 chr15 11918051 11918154 -91576820 + ORR1B1 LTR MaLR 266 365 -2 6 675 23 0 0 0 chr15 11918181 11918204 -91576770 + AT_rich Low_complexity Low_complexity 1 23 0 6 675 1490 169 124 41 chr15 11918408 11918747 -91576227 + ORR1B2 LTR MaLR 1 367 0 6 675 289 232 186 47 chr15 11918785 11918871 -91576103 + B1_Mur4 SINE Alu 53 150 0 6 675 359 327 37 0 chr15 11918974 11919081 -91575893 + B1F2 SINE Alu 8 118 -31 6 675 328 145 54 68 chr15 11921325 11921399 -91573575 + B1_Mur1 SINE Alu 77 149 0 6 675 26 0 0 0 chr15 11922080 11922106 -91572868 + AT_rich Low_complexity Low_complexity 1 26 0 6 675 218 225 84 0 chr15 11922135 11922206 -91572768 - PB1D10 SINE Alu -11 106 30 6 675 290 241 0 0 chr15 11922204 11922262 -91572712 - ID SINE ID -155 69 12 6 675 218 298 35 80 chr15 11922761 11922874 -91572100 - RSINE1 SINE B4 -1 164 57 6 675 3489 28 2 0 chr15 11927021 11927416 -91567558 + MTA_Mm LTR MaLR 1 396 0 6 84 7489 56 52 75 chr15 11927416 11928539 -91566435 + MTA_Mm-int LTR MaLR 1 1098 0 6 676 3105 37 56 0 chr15 11928539 11928913 -91566061 + MTA_Mm LTR MaLR 1 395 -1 6 676 1053 100 0 39 chr15 11929486 11929642 -91565332 + B1_Mur4 SINE Alu 1 150 0 6 676 636 258 38 114 chr15 11929944 11930259 -91564715 + B4A SINE B4 2 292 0 6 676 435 257 63 14 chr15 11930318 11930460 -91564514 - B3A SINE B2 -48 150 2 6 676 588 250 31 8 chr15 11930629 11930758 -91564216 - B3 SINE B2 -84 132 1 6 676 598 278 24 18 chr15 11930764 11930943 -91564031 - B3A SINE B2 0 195 6 6 676 716 243 23 11 chr15 11931230 11931405 -91563569 + B3 SINE B2 2 178 -38 6 676 207 0 0 0 chr15 11931431 11931454 -91563520 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 6 676 1058 81 0 45 chr15 11931459 11931614 -91563360 - B1_Mus1 SINE Alu 0 148 1 6 676 300 363 98 60 chr15 11932409 11932910 -91562064 - MER34A LTR ERV1 -2 569 50 6 676 571 294 45 33 chr15 11933124 11933461 -91561513 + RLTR15 LTR ERVK 3 343 -16 6 676 3077 78 5 0 chr15 11934168 11934564 -91560410 + MTB LTR MaLR 1 398 -2 6 676 323 320 41 0 chr15 11934629 11934726 -91560248 + MLT1A LTR MaLR 1 101 -273 6 676 550 257 255 5 chr15 11934723 11934907 -91560067 - ORR1D2 LTR MaLR -140 230 1 6 676 358 314 101 0 chr15 11935082 11935251 -91559723 + Lx8 LINE L1 7038 7223 -250 6 676 225 323 70 10 chr15 11935395 11935495 -91559479 + RMER15 LTR ERVL 403 508 -67 6 676 695 60 0 0 chr15 11936574 11936658 -91558316 - Lx2 LINE L1 -587 6410 6327 6 676 3036 82 40 11 chr15 11936672 11937116 -91557858 + Lx2 LINE L1 6541 6997 0 6 676 991 308 34 66 chr15 11937989 11938187 -91556787 + L1_Rod LINE L1 5369 5546 -301 6 676 2770 88 30 12 chr15 11938187 11938589 -91556385 + RLTR9E LTR ERVK 1 409 0 6 676 991 308 34 66 chr15 11938589 11938831 -91556143 + L1_Rod LINE L1 5547 5795 -52 6 676 398 263 28 27 chr15 11938846 11938969 -91556005 + L1_Mm LINE L1 5389 5510 -376 6 676 222 89 67 0 chr15 11939029 11939074 -91555900 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 676 24 32 0 0 chr15 11939299 11939330 -91555644 + AT_rich Low_complexity Low_complexity 1 31 0 6 676 219 36 0 0 chr15 11939469 11939497 -91555477 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 6 676 363 250 10 0 chr15 11939499 11939595 -91555379 + RSINE1 SINE B4 1 97 -68 6 676 571 288 35 45 chr15 11939640 11939840 -91555134 + B3A SINE B2 1 198 0 6 676 542 109 160 47 chr15 11939850 11939956 -91555018 + PB1D9 SINE Alu 1 118 -2 6 676 242 292 159 15 chr15 11940749 11940881 -91554093 + L1MB7 LINE L1 6008 6158 -26 6 676 282 29 0 0 chr15 11940953 11940988 -91553986 + (TAA)n Simple_repeat Simple_repeat 1 35 0 6 676 221 218 13 0 chr15 11941205 11941283 -91553691 + (TTGG)n Simple_repeat Simple_repeat 2 80 0 6 676 303 28 0 0 chr15 11941363 11941399 -91553575 + (TTTG)n Simple_repeat Simple_repeat 4 39 0 7 676 482 248 48 8 chr15 11941400 11941526 -91553448 - B1F SINE Alu -10 139 9 7 676 506 261 0 0 chr15 11941534 11941645 -91553329 - PB1D10 SINE Alu 0 117 7 7 676 254 274 0 0 chr15 11941590 11941652 -91553322 - B4A SINE B4 -146 146 85 7 676 1592 211 64 6 chr15 11942309 11942666 -91552308 - MTD LTR MaLR -39 380 3 7 676 393 116 0 0 chr15 11943148 11943217 -91551757 + (TA)n Simple_repeat Simple_repeat 2 70 0 7 676 1057 220 55 4 chr15 11943374 11943630 -91551344 - MTD LTR MaLR -150 269 1 7 676 2074 169 31 21 chr15 11943660 11944046 -91550928 + RMER4A LTR ERVK 1 390 -76 7 676 1524 219 48 71 chr15 11944080 11944473 -91550501 - ORR1C2 LTR MaLR 0 384 1 7 676 645 264 88 23 chr15 11944491 11944662 -91550312 + B3A SINE B2 1 182 -16 7 676 284 161 16 0 chr15 11944665 11944727 -91550247 + GA-rich Low_complexity Low_complexity 2 64 0 7 676 448 243 63 42 chr15 11944752 11944894 -91550080 - MLT1D LTR MaLR -336 169 25 7 676 387 0 0 0 chr15 11945420 11945463 -91549511 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 676 342 258 300 59 chr15 11945465 11945743 -91549231 - ORR1E LTR MaLR -3 376 32 7 676 747 292 14 18 chr15 11945787 11946010 -91548964 - ID_B1 SINE B4 -1 223 2 7 676 443 293 122 30 chr15 11946650 11946768 -91548206 - MER20 DNA MER1_type -2 217 80 7 676 222 37 0 0 chr15 11946768 11946795 -91548179 + (CCCCCA)n Simple_repeat Simple_repeat 1 27 0 7 676 443 293 122 30 chr15 11946795 11946873 -91548101 - MER20 DNA MER1_type -140 79 5 7 676 642 304 98 61 chr15 11948202 11948479 -91546495 - MLT2D LTR ERVL -3 411 125 7 676 594 266 72 50 chr15 11949261 11949582 -91545392 + L1MC1 LINE L1 5928 6255 -78 7 676 24 0 0 0 chr15 11949617 11949641 -91545333 + AT_rich Low_complexity Low_complexity 1 24 0 7 676 540 268 83 30 chr15 11950348 11950596 -91544378 - MER34A1 LTR ERV1 -18 553 287 7 676 194 128 0 25 chr15 11950863 11950903 -91544071 + G-rich Low_complexity Low_complexity 2 40 0 7 676 330 290 73 134 chr15 11950944 11951123 -91543851 + MER21B LTR ERV1 681 848 -15 7 676 352 248 40 24 chr15 11951143 11951267 -91543707 - Tigger7 DNA MER2_type -95 2396 2271 7 676 374 298 115 0 chr15 11951287 11951391 -91543583 + B1F2 SINE Alu 6 121 -28 7 676 330 315 158 0 chr15 11951391 11951405 -91543569 + ID_B1 SINE B4 128 224 0 7 676 277 232 0 18 chr15 11951420 11951477 -91543497 + RSINE1 SINE B4 4 59 -106 7 676 303 241 0 0 chr15 11951491 11951545 -91543429 + RSINE1 SINE B4 44 97 -68 7 676 327 78 0 0 chr15 11951573 11951624 -91543350 + (GA)n Simple_repeat Simple_repeat 2 52 0 7 676 305 62 21 0 chr15 11951669 11951717 -91543257 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 676 287 254 7 174 chr15 11951750 11951801 -91543173 - Tigger7 DNA MER2_type -2376 115 70 7 676 387 0 0 0 chr15 11951801 11951844 -91543130 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 7 676 1090 93 0 0 chr15 11951844 11951983 -91542991 - B1_Mus1 SINE Alu -9 139 1 7 676 287 254 7 174 chr15 11951983 11952068 -91542906 - Tigger7 DNA MER2_type -2422 69 2 7 676 596 275 68 12 chr15 11953000 11953257 -91541717 + L1MB2 LINE L1 5442 5707 -461 7 676 462 143 0 0 chr15 11953257 11953334 -91541640 + (CA)n Simple_repeat Simple_repeat 2 78 0 7 676 303 170 0 19 chr15 11953340 11953394 -91541580 + HAL1-3A_ME LINE L1 1975 2027 -831 7 676 773 279 66 19 chr15 11953485 11953744 -91541230 + B4A SINE B4 10 280 -12 7 676 344 213 165 0 chr15 11953764 11953891 -91541083 + L1MB2 LINE L1 6017 6164 -7 7 676 275 286 169 68 chr15 11953941 11954338 -91540636 + L1MA6 LINE L1 5854 6290 -10 7 676 336 272 70 49 chr15 11955402 11955545 -91539429 - B1_Mm SINE Alu -1 146 1 7 676 382 231 61 179 chr15 11955563 11955987 -91538987 - L1MB5 LINE L1 -213 5961 5587 7 676 185 259 93 0 chr15 11956284 11956338 -91538636 - MIRb SINE MIR -83 185 127 7 676 331 289 24 43 chr15 11956493 11956612 -91538362 + L2a LINE L2 3252 3424 -2 7 676 420 200 0 0 chr15 11956762 11956887 -91538087 + (CA)n Simple_repeat Simple_repeat 2 126 0 7 676 180 0 0 0 chr15 11958304 11958324 -91536650 + (TGGGGG)n Simple_repeat Simple_repeat 1 20 0 7 676 2393 134 85 27 chr15 11958719 11959164 -91535810 - RMER6A LTR ERVK 0 756 286 7 676 807 72 0 18 chr15 11959157 11959271 -91535703 - B2_Mm1t SINE B2 0 193 82 7 676 2004 125 12 15 chr15 11959289 11959614 -91535360 - RMER6A LTR ERVK -432 324 1 7 676 361 302 0 16 chr15 11960117 11960245 -91534729 + (CCA)n Simple_repeat Simple_repeat 3 128 0 7 676 1793 163 49 47 chr15 11960245 11960444 -91534530 + RMER17C LTR ERVK 1 187 -223 7 676 443 18 18 0 chr15 11960444 11960500 -91534474 + (TC)n Simple_repeat Simple_repeat 2 58 0 7 676 1793 163 49 47 chr15 11960500 11960705 -91534269 + RMER17C LTR ERVK 188 405 -5 7 676 252 0 0 0 chr15 11960794 11960822 -91534152 + (A)n Simple_repeat Simple_repeat 1 28 0 7 676 25 0 0 0 chr15 11961944 11961969 -91533005 + AT_rich Low_complexity Low_complexity 1 25 0 7 676 410 299 0 46 chr15 11961994 11962145 -91532829 + MLT1A LTR MaLR 48 191 -183 7 676 27 0 0 0 chr15 11962248 11962275 -91532699 + AT_rich Low_complexity Low_complexity 1 27 0 7 676 1216 265 63 61 chr15 11962377 11962866 -91532108 + RLTR20B3 LTR ERVK 8 471 -106 7 676 450 0 0 0 chr15 11962866 11962916 -91532058 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 676 823 246 104 44 chr15 11962916 11962985 -91531989 + RLTR20B3 LTR ERVK 459 528 0 7 676 853 181 14 7 chr15 11963115 11963260 -91531714 + B1_Mus2 SINE Alu 2 147 0 7 676 312 286 134 14 chr15 11963285 11963352 -91531622 + HAL1-3A_ME LINE L1 2286 2356 -502 7 676 3208 45 27 2 chr15 11963352 11963755 -91531219 + L1Md_F3 LINE L1 6172 6584 0 7 676 312 286 134 14 chr15 11963755 11963829 -91531145 + HAL1-3A_ME LINE L1 2357 2443 -415 7 676 718 109 17 0 chr15 11963829 11963948 -91531026 + (GGAA)n Simple_repeat Simple_repeat 4 124 0 7 676 206 146 54 18 chr15 11964419 11964475 -91530499 + GA-rich Low_complexity Low_complexity 1 58 0 7 676 634 265 89 30 chr15 11965048 11965250 -91529724 + MLT1D LTR MaLR 31 244 -261 7 676 603 114 291 7 chr15 11965384 11965525 -91529449 + ORR1D1 LTR MaLR 1 181 -193 7 676 615 92 0 0 chr15 11965526 11965613 -91529361 + (TCCC)n Simple_repeat Simple_repeat 3 89 0 7 676 796 117 8 8 chr15 11965845 11965966 -91529008 + B1_Mur4 SINE Alu 30 150 0 7 676 288 86 52 41 chr15 11965966 11966063 -91528911 + A-rich Low_complexity Low_complexity 5 102 0 7 676 691 201 7 3 chr15 11966082 11966220 -91528754 + PB1D9 SINE Alu 9 149 0 7 676 568 279 51 107 chr15 11966298 11966715 -91528259 - MTE2a LTR MaLR -13 406 10 7 676 520 294 26 52 chr15 11967222 11967376 -91527598 - MTC LTR MaLR -140 281 132 7 676 608 285 0 0 chr15 11967660 11967797 -91527177 - B1F SINE Alu -11 138 2 7 676 528 16 0 0 chr15 11967877 11967938 -91527036 + (TC)n Simple_repeat Simple_repeat 2 62 0 7 676 999 93 7 14 chr15 11967955 11968097 -91526877 - B1_Mus1 SINE Alu -1 147 7 7 676 416 237 103 69 chr15 11967998 11968143 -91526831 - MT2B LTR ERVL -344 257 108 7 676 583 259 12 31 chr15 11968097 11968118 -91526856 - ID_B1 SINE B4 -2 222 63 7 676 518 259 0 0 chr15 11968271 11968383 -91526591 + PB1D10 SINE Alu 5 116 -1 7 676 243 0 0 0 chr15 11968593 11968620 -91526354 + (TTG)n Simple_repeat Simple_repeat 2 28 0 7 676 678 243 7 0 chr15 11968674 11968822 -91526152 + B1F SINE Alu 1 149 0 7 676 344 100 50 0 chr15 11968839 11968919 -91526055 + (GGGA)n Simple_repeat Simple_repeat 2 85 0 7 676 259 342 82 38 chr15 11969606 11969764 -91525210 + MIR SINE MIR 5 169 -93 7 676 393 22 0 0 chr15 11969996 11970042 -91524932 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 676 268 336 32 83 chr15 11970292 11970448 -91524526 - LTR88a LTR Gypsy -22 794 647 7 676 195 69 0 0 chr15 11970592 11970621 -91524353 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 7 676 404 245 29 39 chr15 11970621 11970706 -91524268 - ID_B1 SINE B4 -14 210 118 7 676 351 65 0 0 chr15 11970713 11970759 -91524215 + (CATA)n Simple_repeat Simple_repeat 3 48 0 7 676 285 283 64 21 chr15 11970759 11970845 -91524129 - PB1D10 SINE Alu -15 102 13 7 676 593 258 164 40 chr15 11971094 11971204 -91523770 + LTR37B LTR ERV1 15 158 -310 7 676 311 0 0 25 chr15 11971204 11971244 -91523730 + (TTA)n Simple_repeat Simple_repeat 1 39 0 7 676 593 258 164 40 chr15 11971244 11971383 -91523591 + LTR37B LTR ERV1 159 294 -174 7 676 2178 177 16 0 chr15 11971762 11972130 -91522844 - ORR1C1 LTR MaLR 0 378 5 7 676 402 182 11 11 chr15 11972484 11972573 -91522401 + RLTR9E LTR ERVK 320 408 -1 7 676 229 316 8 114 chr15 11972574 11972662 -91522312 + LTR37B LTR ERV1 351 437 -31 7 676 1477 38 11 21 chr15 11972662 11972852 -91522122 - B2_Mm2 SINE B2 -7 188 1 7 676 229 316 8 114 chr15 11972852 11972895 -91522079 + LTR37B LTR ERV1 438 468 0 7 676 195 42 0 0 chr15 11972914 11972938 -91522036 + (T)n Simple_repeat Simple_repeat 1 24 0 7 676 1216 48 0 0 chr15 11972938 11973085 -91521889 - B1_Mus2 SINE Alu 0 147 1 7 676 480 231 29 9 chr15 11973182 11973287 -91521687 - MLT1A LTR MaLR 0 374 268 7 676 3376 38 5 2 chr15 11973322 11973717 -91521257 + MTA_Mm LTR MaLR 1 396 0 7 676 395 333 70 6 chr15 11973727 11973884 -91521090 - MLT1A LTR MaLR -198 167 1 7 676 181 283 67 0 chr15 11973896 11973956 -91521018 - L2b LINE L2 -47 3328 3265 7 676 252 0 0 0 chr15 11974382 11974410 -91520564 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 7 676 302 271 0 14 chr15 11974454 11974525 -91520449 + B3A SINE B2 93 162 -36 7 676 237 65 0 0 chr15 11974525 11974556 -91520418 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 676 482 0 17 0 chr15 11974563 11974621 -91520353 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 7 676 307 228 0 17 chr15 11974639 11974697 -91520277 + RSINE1 SINE B4 46 102 -63 7 676 279 0 0 0 chr15 11974749 11974780 -91520194 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 676 319 313 204 19 chr15 11974784 11975054 -91519920 - L1MD3 LINE L1 -148 7847 7528 7 676 3742 38 2 5 chr15 11975585 11976034 -91518940 + L1Md_T LINE L1 6135 6582 0 7 676 377 298 24 16 chr15 11976059 11976182 -91518792 + PB1 SINE Alu 2 125 -2 8 676 208 235 20 0 chr15 11976196 11976247 -91518727 + GA-rich Low_complexity Low_complexity 5 56 0 8 676 334 211 10 135 chr15 11976271 11976375 -91518599 + PB1D10 SINE Alu 26 116 -1 8 676 366 23 0 0 chr15 11976375 11976418 -91518556 + (GA)n Simple_repeat Simple_repeat 1 43 0 8 676 1133 86 0 6 chr15 11976418 11976582 -91518392 + (GGAA)n Simple_repeat Simple_repeat 4 166 0 8 676 402 208 87 29 chr15 11976717 11976821 -91518153 + PB1D10 SINE Alu 3 112 -5 8 676 1180 155 26 56 chr15 11977033 11977265 -91517709 + URR1B DNA MER1_type 1 225 0 8 676 553 288 20 0 chr15 11977793 11977939 -91517035 - B1_Mur1 SINE Alu 0 149 1 8 676 716 254 124 168 chr15 11977966 11978178 -91516796 - MTD LTR MaLR -1 418 191 8 676 1630 32 5 0 chr15 11978178 11978367 -91516607 + B2_Mm1a SINE B2 2 191 -2 8 676 716 254 124 168 chr15 11978367 11978566 -91516408 - MTD LTR MaLR -229 190 25 8 676 1010 248 19 0 chr15 11978597 11978807 -91516167 - ID_B1 SINE B4 -1 223 10 8 676 268 383 41 46 chr15 11979219 11979438 -91515536 - LTR78 LTR ERV1 -193 1111 894 8 676 319 305 65 19 chr15 11979935 11980089 -91514885 - RSINE1 SINE B4 -2 163 3 8 676 1092 143 60 56 chr15 11980210 11980425 -91514549 + B3 SINE B2 1 216 0 8 676 1372 89 5 30 chr15 11980531 11980729 -91514245 - B2_Mm2 SINE B2 -2 193 1 8 676 329 324 19 39 chr15 11980731 11980885 -91514089 - L1MB8 LINE L1 -122 6056 5906 8 676 944 308 69 25 chr15 11981085 11981534 -91513440 - L1MB8 LINE L1 -387 5797 5329 8 676 316 247 78 0 chr15 11981951 11982028 -91512946 - ERVL-E-int LTR ERVL -3971 1696 1614 8 676 919 287 80 35 chr15 11982152 11982578 -91512396 - Charlie1a DNA MER1_type -41 1414 970 8 676 502 271 62 50 chr15 11982663 11982842 -91512132 - B3A SINE B2 -15 183 3 8 676 1139 211 54 27 chr15 11983097 11983394 -91511580 + Lx7 LINE L1 6808 7112 -584 8 676 345 310 61 65 chr15 11983816 11984095 -91510879 - RMER2 LTR ERV1 0 567 290 8 676 324 167 0 0 chr15 11984504 11984558 -91510416 + ID4_ SINE ID 1 54 -29 8 676 1250 173 0 34 chr15 11985079 11985312 -91509662 + URR1A DNA MER1_type 2 226 0 8 676 3007 8 2 133 chr15 11985685 11986107 -91508867 - IAPLTR1_Mm LTR ERVK 0 367 1 8 676 54959 25 14 2 chr15 11986107 11992426 -91502548 - IAPEz-int LTR ERVK 0 6481 8 8 676 3007 8 2 133 chr15 11992426 11992848 -91502126 - IAPLTR1_Mm LTR ERVK 0 367 1 8 676 257 0 30 0 chr15 11993129 11993162 -91501812 + (TTG)n Simple_repeat Simple_repeat 2 35 0 8 676 989 119 6 3 chr15 11993166 11993334 -91501640 - B2_Mm2 SINE B2 -22 171 2 8 676 650 195 19 49 chr15 11993688 11993850 -91501124 - MER2 DNA MER2_type -103 242 86 8 676 234 0 0 0 chr15 11993868 11993894 -91501080 + (T)n Simple_repeat Simple_repeat 1 26 0 8 676 1197 55 0 7 chr15 11993894 11994041 -91500933 - B1_Mus2 SINE Alu 0 147 2 8 676 207 88 0 0 chr15 11994470 11994504 -91500470 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 8 676 273 57 0 0 chr15 11994671 11994706 -91500268 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 8 676 189 0 0 0 chr15 11994702 11994723 -91500251 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 8 676 522 87 294 0 chr15 11994731 11994823 -91500151 - PB1D9 SINE Alu 0 120 2 8 676 321 26 0 0 chr15 11994825 11994863 -91500111 + (TC)n Simple_repeat Simple_repeat 1 38 0 8 676 1149 56 21 0 chr15 11994917 11995061 -91499913 - B1_Mus1 SINE Alu 0 148 2 8 676 858 93 7 14 chr15 11995063 11995204 -91499770 + (TCTA)n Simple_repeat Simple_repeat 2 141 0 8 676 355 254 41 71 chr15 11995210 11995309 -91499665 - RSINE1 SINE B4 -60 105 8 8 676 1131 94 0 0 chr15 11995330 11995510 -91499464 + (TG)n Simple_repeat Simple_repeat 1 180 0 8 676 256 309 144 37 chr15 11995935 11996123 -91498851 + MLT1K LTR MaLR 262 469 -126 8 676 538 295 70 0 chr15 11996954 11997110 -91497864 - MER5A DNA MER1_type -2 187 21 8 676 378 0 0 0 chr15 11997426 11997468 -91497506 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 676 539 185 15 0 chr15 11997653 11997783 -91497191 + CT-rich Low_complexity Low_complexity 2 133 0 8 676 21 0 0 0 chr15 11998023 11998044 -91496930 + AT_rich Low_complexity Low_complexity 1 21 0 8 676 297 135 0 0 chr15 11998838 11998890 -91496084 + (TCCC)n Simple_repeat Simple_repeat 4 55 0 8 676 388 271 58 0 chr15 11998932 11999038 -91495936 - PB1D10 SINE Alu -7 110 1 8 676 2510 190 60 43 chr15 11999145 11999886 -91495088 - RMER1B Other Other 0 1066 63 8 676 380 301 0 41 chr15 11999887 11999984 -91494990 - RSINE1 SINE B4 -45 120 28 8 676 1244 209 138 3 chr15 12000000 12000326 -91494648 - MTD LTR MaLR -6 413 44 1 676 866 200 63 0 chr15 12000331 12000506 -91494468 + Lx9 LINE L1 7143 7328 -316 2 676 4331 119 71 18 chr15 12000506 12000626 -91494348 + RMER6A LTR ERVK 1 166 -590 3 676 2763 52 0 62 chr15 12000626 12000995 -91493979 - ORR1A1 LTR MaLR 0 346 1 4 676 4331 119 71 18 chr15 12000995 12001592 -91493382 + RMER6A LTR ERVK 167 756 0 3 676 1222 189 37 55 chr15 12001596 12001921 -91493053 + Lx9 LINE L1 7326 7644 0 2 676 234 250 16 16 chr15 12001936 12001997 -91492977 - MTD LTR MaLR -358 61 1 1 676 398 346 79 74 chr15 12002159 12002512 -91492462 - ORR1E LTR MaLR -4 355 1 5 676 305 308 26 0 chr15 12002801 12002879 -91492095 - BC1_Mm scRNA scRNA -59 93 14 6 676 265 267 17 0 chr15 12003087 12003147 -91491827 + MTEb LTR MaLR 38 98 -281 7 676 1780 224 31 0 chr15 12003159 12003512 -91491462 - MTE2b LTR MaLR -15 364 1 8 676 386 188 112 9 chr15 12003512 12003706 -91491268 + MTEb LTR MaLR 104 379 0 7 676 254 247 122 12 chr15 12003914 12003996 -91490978 + ORR1E LTR MaLR 269 359 0 9 676 337 273 22 22 chr15 12004231 12004321 -91490653 + MLT1A1 LTR MaLR 307 396 -12 1 676 825 103 11 22 chr15 12004634 12004813 -91490161 + (TG)n Simple_repeat Simple_repeat 1 177 0 1 676 957 132 5 25 chr15 12004828 12005398 -91489576 + (TG)n Simple_repeat Simple_repeat 1 558 0 1 676 415 250 118 24 chr15 12005405 12005532 -91489442 - ID_B1 SINE B4 -3 221 83 1 676 225 306 71 43 chr15 12005888 12006028 -91488946 - LTR40a LTR ERVL -91 428 285 1 676 2629 77 14 8 chr15 12006753 12007120 -91487854 + L1_Mus3 LINE L1 6266 6634 -4 1 676 496 31 0 15 chr15 12007325 12007391 -91487583 + B1_Mus2 SINE Alu 83 147 0 1 676 271 23 70 0 chr15 12007405 12007448 -91487526 + (GAAAA)n Simple_repeat Simple_repeat 2 47 0 1 676 355 331 73 6 chr15 12007559 12007723 -91487251 + MER45A DNA Tip100 4 178 0 1 676 619 245 143 5 chr15 12007827 12008016 -91486958 - B3 SINE B2 -1 215 1 1 676 225 0 0 0 chr15 12008134 12008159 -91486815 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1 676 1581 264 71 31 chr15 12008174 12008967 -91486007 - Lx5 LINE L1 -38 7012 6305 2 676 320 308 124 110 chr15 12008995 12009367 -91485607 + LTR16C LTR ERVL 105 481 -8 2 676 1845 188 76 41 chr15 12009856 12010250 -91484724 + Lx5 LINE L1 6643 7050 0 2 676 477 90 0 0 chr15 12010266 12010333 -91484641 + (TCC)n Simple_repeat Simple_repeat 3 69 0 2 676 758 211 0 0 chr15 12010336 12010469 -91484505 - B1F2 SINE Alu -15 134 2 2 676 731 296 115 16 chr15 12010496 12010818 -91484156 + MER34A1 LTR ERV1 209 562 -25 2 676 401 354 49 137 chr15 12010885 12011229 -91483745 - MLT1J LTR MaLR -197 315 2 2 676 1050 266 63 123 chr15 12012040 12012469 -91482505 + MLT2D LTR ERVL 1 403 -11 2 676 265 206 13 6 chr15 12012821 12012893 -91482081 - B1_Mur1 SINE Alu -16 131 59 2 676 1630 59 41 0 chr15 12013280 12013501 -91481473 - L1_Mus3 LINE L1 -11 6627 6398 2 676 2489 81 9 0 chr15 12013501 12013833 -91481141 + L1_Mus3 LINE L1 6069 6403 -235 2 676 189 263 90 66 chr15 12014059 12014181 -91480793 + MER5A DNA MER1_type 36 160 -29 3 676 332 247 0 0 chr15 12015066 12015143 -91479831 + Lx9 LINE L1 7387 7463 -181 3 676 360 0 0 0 chr15 12015143 12015183 -91479791 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 676 370 331 78 8 chr15 12015184 12015312 -91479662 - RSINE1 SINE B4 -11 154 18 3 676 1381 166 4 9 chr15 12015424 12015649 -91479325 + URR1B DNA MER1_type 2 225 0 3 676 503 208 20 0 chr15 12015800 12015901 -91479073 - B1_Mur2 SINE Alu -6 143 41 3 676 251 114 42 28 chr15 12015904 12015976 -91478998 + T-rich Low_complexity Low_complexity 1 73 0 3 676 1142 55 7 40 chr15 12015976 12016128 -91478846 - B1_Mus1 SINE Alu 0 148 2 3 676 257 100 50 0 chr15 12016129 12016169 -91478805 - PB1D9 SINE Alu -67 53 12 3 676 338 301 153 21 chr15 12016338 12016528 -91478446 - ID_B1 SINE B4 -7 217 3 3 676 711 81 0 0 chr15 12016538 12016637 -91478337 + (TTTTC)n Simple_repeat Simple_repeat 2 100 0 4 676 942 186 57 26 chr15 12016641 12016868 -91478106 - RLTR31_Mm LTR ERVK -216 345 112 4 676 357 24 0 0 chr15 12016920 12016962 -91478012 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 676 512 198 10 10 chr15 12016984 12017086 -91477888 - RSINE1 SINE B4 -62 103 2 4 676 418 255 94 6 chr15 12018159 12018317 -91476657 + ID_B1 SINE B4 35 203 -21 4 676 856 91 0 15 chr15 12018330 12018464 -91476510 + (GGAA)n Simple_repeat Simple_repeat 2 133 0 4 676 392 53 18 0 chr15 12018464 12018516 -91476458 + (GA)n Simple_repeat Simple_repeat 1 53 0 4 676 204 213 0 41 chr15 12018521 12018570 -91476404 + GA-rich Low_complexity Low_complexity 2 48 0 4 676 534 277 74 34 chr15 12018647 12018916 -91476058 + B4A SINE B4 3 282 -10 4 676 505 315 159 35 chr15 12018967 12019194 -91475780 + B4A SINE B4 38 292 0 4 676 424 174 224 32 chr15 12019245 12019370 -91475604 + B1F SINE Alu 1 149 0 5 676 247 208 38 0 chr15 12019597 12019650 -91475324 - PB1D9 SINE Alu 0 120 66 5 676 405 0 0 0 chr15 12020047 12020092 -91474882 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 676 486 0 0 0 chr15 12020536 12020590 -91474384 + (TCTG)n Simple_repeat Simple_repeat 2 55 0 5 676 341 234 101 48 chr15 12020591 12020734 -91474240 - MLT2B2 LTR ERVL -197 357 202 5 676 340 224 0 26 chr15 12020860 12020938 -91474036 + PB1D10 SINE Alu 1 76 -41 5 676 1997 157 71 11 chr15 12020987 12021354 -91473620 - ORR1B1 LTR MaLR 0 394 6 5 676 718 166 67 67 chr15 12022027 12022176 -91472798 - B3 SINE B2 -67 149 1 5 676 27 0 0 0 chr15 12022349 12022376 -91472598 + AT_rich Low_complexity Low_complexity 1 27 0 5 676 1511 211 62 6 chr15 12022376 12022696 -91472278 - Lx3C LINE L1 -2 6974 6637 5 676 222 118 39 19 chr15 12024270 12024322 -91470652 + (TAA)n Simple_repeat Simple_repeat 3 55 0 6 676 2418 93 6 0 chr15 12024367 12024690 -91470284 - ORR1A2 LTR MaLR 0 327 3 6 676 1145 70 0 0 chr15 12024955 12025097 -91469877 - B1_Mus1 SINE Alu -6 142 1 6 676 294 206 0 0 chr15 12025128 12025191 -91469783 + (CA)n Simple_repeat Simple_repeat 1 63 0 6 676 279 0 0 0 chr15 12025384 12025415 -91469559 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 676 227 0 91 0 chr15 12025415 12025447 -91469527 + (TATATG)n Simple_repeat Simple_repeat 6 41 0 6 676 624 178 13 13 chr15 12025569 12025584 -91469390 + (TTG)n Simple_repeat Simple_repeat 2 17 0 6 676 1023 156 0 0 chr15 12025584 12025763 -91469211 + (CTG)n Simple_repeat Simple_repeat 1 179 0 6 676 624 178 13 13 chr15 12025763 12025901 -91469073 + (TTG)n Simple_repeat Simple_repeat 3 139 0 6 676 524 279 32 0 chr15 12025915 12026069 -91468905 - HAL1-2a_MD LINE L1 -519 2505 2347 6 676 262 256 165 13 chr15 12026080 12026159 -91468815 - PB1D10 SINE Alu -6 111 21 7 676 333 272 16 73 chr15 12026608 12026731 -91468243 - PB1D10 SINE Alu -1 116 1 7 676 645 128 0 0 chr15 12026753 12026855 -91468119 + (TTTC)n Simple_repeat Simple_repeat 1 102 0 7 676 972 194 49 62 chr15 12026863 12027088 -91467886 - ID_B1 SINE B4 -1 223 2 7 676 873 230 5 33 chr15 12027153 12027337 -91467637 + B3A SINE B2 3 181 -17 7 676 1179 292 71 25 chr15 12027395 12027763 -91467211 - MER21B LTR ERV1 -32 831 447 7 676 320 329 103 58 chr15 12027763 12027918 -91467056 + RSINE1 SINE B4 4 165 0 7 676 23 0 0 0 chr15 12027943 12027966 -91467008 + AT_rich Low_complexity Low_complexity 1 23 0 7 676 1327 186 82 73 chr15 12027966 12028062 -91466912 - ORR1D1 LTR MaLR -28 346 248 7 676 1166 14 0 61 chr15 12028062 12028253 -91466721 + (CAGG)n Simple_repeat Simple_repeat 1 180 -823 7 676 1166 14 0 61 chr15 12028263 12029131 -91465843 + (CAGG)n Simple_repeat Simple_repeat 181 1003 0 7 676 1327 186 82 73 chr15 12029131 12029142 -91465832 - ORR1D1 LTR MaLR -134 240 236 7 676 1185 15 0 62 chr15 12029142 12029567 -91465407 + (CAGG)n Simple_repeat Simple_repeat 1 398 0 8 676 1327 186 82 73 chr15 12029567 12029778 -91465196 - ORR1D1 LTR MaLR -139 235 11 7 676 23 0 0 0 chr15 12029798 12029821 -91465153 + AT_rich Low_complexity Low_complexity 1 23 0 8 676 1358 77 50 0 chr15 12029983 12030165 -91464809 + B2_Mm2 SINE B2 2 192 -3 8 676 1041 95 0 75 chr15 12030166 12030325 -91464649 + B1_Mus1 SINE Alu 2 148 0 8 676 809 168 0 6 chr15 12030325 12030481 -91464493 + GA-rich Low_complexity Low_complexity 4 158 0 8 676 339 25 0 0 chr15 12030484 12030524 -91464450 + (GAGAA)n Simple_repeat Simple_repeat 1 40 0 8 676 327 300 90 16 chr15 12030541 12030663 -91464311 + MIRb SINE MIR 42 172 -96 8 676 375 360 99 44 chr15 12030743 12031155 -91463819 + MER20B DNA MER1_type 251 685 -98 8 676 870 251 76 65 chr15 12031174 12031528 -91463446 - ORR1E LTR MaLR -1 358 1 8 676 417 243 87 14 chr15 12031625 12031763 -91463211 + RSINE1 SINE B4 2 149 -16 8 676 260 292 46 30 chr15 12031837 12031950 -91463024 + PB1 SINE Alu 1 100 -20 9 676 201 175 0 0 chr15 12031966 12032006 -91462968 + GA-rich Low_complexity Low_complexity 1 40 0 9 676 567 301 14 0 chr15 12032259 12032405 -91462569 + ID_B1 SINE B4 76 223 -1 9 676 956 236 56 5 chr15 12032407 12032620 -91462354 + ID_B1 SINE B4 1 224 0 9 676 299 313 60 0 chr15 12034175 12034256 -91460718 - MLT1A1 LTR MaLR -188 220 135 9 676 404 331 50 102 chr15 12034256 12034639 -91460335 - ORR1D2 LTR MaLR -2 368 6 9 676 486 234 203 0 chr15 12035061 12035189 -91459785 + RSINE1 SINE B4 2 155 -10 9 676 543 230 18 0 chr15 12035249 12035414 -91459560 + (TA)n Simple_repeat Simple_repeat 2 169 0 9 676 291 28 0 0 chr15 12035414 12035450 -91459524 + (GA)n Simple_repeat Simple_repeat 2 37 0 9 676 583 271 83 7 chr15 12035451 12035596 -91459378 + RSINE1 SINE B4 6 161 -4 9 676 1075 88 0 26 chr15 12035650 12035802 -91459172 + B1_Mur3 SINE Alu 2 149 0 1 676 333 339 48 12 chr15 12037518 12037685 -91457289 + ERVL-E-int LTR ERVL 3101 3273 -2394 1 676 298 257 50 50 chr15 12038052 12038171 -91456803 - ORR1E LTR MaLR -240 119 1 1 676 310 295 45 8 chr15 12038369 12038502 -91456472 + B1F SINE Alu 3 140 -9 1 676 237 246 147 0 chr15 12038517 12038599 -91456375 + ID4_ SINE ID 7 99 -53 1 676 2952 129 5 5 chr15 12038711 12039147 -91455827 - RLTR10C LTR ERVK 0 436 1 1 676 467 119 0 0 chr15 12039536 12039603 -91455371 - B3A SINE B2 -131 67 1 1 676 250 238 333 0 chr15 12039855 12039960 -91455014 + MLT1D LTR MaLR 75 214 -291 1 676 1282 115 10 15 chr15 12039960 12040155 -91454819 + B2_Mm2 SINE B2 2 195 0 1 676 597 49 0 0 chr15 12040238 12040319 -91454655 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 1 676 612 217 43 56 chr15 12040335 12040496 -91454478 - RSINE1 SINE B4 -4 161 3 1 676 270 246 105 0 chr15 12040581 12040638 -91454336 + ID4_ SINE ID 8 70 -13 1 676 342 0 0 0 chr15 12040640 12040678 -91454296 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 676 205 273 70 35 chr15 12040688 12040745 -91454229 - MIR SINE MIR -170 92 34 1 676 282 278 185 34 chr15 12040794 12040913 -91454061 - MER3 DNA MER1_type -72 137 1 1 676 249 278 122 38 chr15 12041377 12041508 -91453466 - L2a LINE L2 -14 3412 3271 1 676 327 324 0 36 chr15 12042009 12042121 -91452853 + PB1D10 SINE Alu 2 109 -8 1 676 360 210 60 0 chr15 12042284 12042384 -91452590 + L1MB7 LINE L1 5861 5966 -218 1 676 256 296 152 36 chr15 12042392 12042504 -91452470 + B1F1 SINE Alu 2 126 -23 1 676 284 333 83 18 chr15 12042583 12042751 -91452223 + L1MB7 LINE L1 5980 6158 -26 1 676 272 200 150 0 chr15 12042773 12042833 -91452141 - B1F SINE Alu -10 139 71 1 676 1084 246 136 37 chr15 12042851 12043226 -91451748 - MTD LTR MaLR -4 415 4 1 676 330 259 12 12 chr15 12043414 12043500 -91451474 + Tigger14a DNA MER2_type 79 164 -160 1 676 561 234 143 97 chr15 12044081 12044360 -91450614 - B4A SINE B4 0 292 1 1 676 803 252 13 60 chr15 12044388 12044620 -91450354 - ID_B1 SINE B4 -3 221 1 1 676 484 324 13 33 chr15 12044865 12045018 -91449956 - RSINE1 SINE B4 -14 151 2 1 676 273 278 0 0 chr15 12045191 12045245 -91449729 - RSINE1 SINE B4 -109 56 3 1 676 452 18 18 0 chr15 12046202 12046259 -91448715 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 676 469 264 0 9 chr15 12046512 12046623 -91448351 - PB1D7 SINE Alu -8 112 3 1 676 23 54 0 0 chr15 12047856 12047893 -91447081 + GC_rich Low_complexity Low_complexity 1 37 0 1 676 183 42 0 0 chr15 12048060 12048084 -91446890 + (CGG)n Simple_repeat Simple_repeat 2 25 0 1 676 256 262 19 28 chr15 12048102 12048208 -91446766 + C-rich Low_complexity Low_complexity 3 107 0 1 676 1045 112 47 12 chr15 12050047 12050218 -91444756 + B2_Mm2 SINE B2 5 181 -14 1 676 456 19 0 0 chr15 12050437 12050490 -91444484 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 676 215 31 31 0 chr15 12050948 12050980 -91443994 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1 676 439 232 10 31 chr15 12051340 12051438 -91443536 - ID_B1 SINE B4 -2 222 127 1 676 653 185 0 16 chr15 12051746 12051867 -91443107 - PB1D9 SINE Alu 0 120 2 1 676 297 0 0 0 chr15 12052691 12052724 -91442250 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 676 182 376 102 16 chr15 12052962 12053089 -91441885 + MIRb SINE MIR 6 143 -125 1 676 21 36 0 0 chr15 12053172 12053200 -91441774 + AT_rich Low_complexity Low_complexity 1 28 0 1 676 217 341 171 0 chr15 12053404 12053486 -91441488 + B1_Mm SINE Alu 1 96 -51 1 676 1284 68 85 0 chr15 12053709 12053886 -91441088 + B2_Mm1a SINE B2 2 193 0 1 676 254 69 0 65 chr15 12053961 12054023 -91440951 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 676 551 283 61 36 chr15 12054681 12054846 -91440128 - B3A SINE B2 -27 171 3 1 676 356 245 84 11 chr15 12054911 12055006 -91439968 - B1F SINE Alu -5 144 43 1 676 391 301 10 0 chr15 12055081 12055184 -91439790 + B3A SINE B2 53 156 -42 1 676 490 190 0 17 chr15 12055188 12055306 -91439668 + (TG)n Simple_repeat Simple_repeat 2 117 0 1 676 702 270 0 36 chr15 12055320 12055485 -91439489 + B3 SINE B2 2 160 -56 1 676 23 54 0 0 chr15 12055493 12055530 -91439444 + AT_rich Low_complexity Low_complexity 1 37 0 1 676 537 189 26 6 chr15 12055549 12055664 -91439310 + PB1D9 SINE Alu 10 127 0 1 676 23 0 0 0 chr15 12055802 12055825 -91439149 + AT_rich Low_complexity Low_complexity 1 23 0 1 676 461 210 0 0 chr15 12056079 12056160 -91438814 - RSINE1 SINE B4 -74 91 11 1 676 1068 82 0 0 chr15 12056251 12056385 -91438589 + B1_Mus1 SINE Alu 2 135 -13 1 676 1150 61 0 20 chr15 12056602 12056614 -91438360 - B1_Mus1 SINE Alu 0 148 139 1 676 236 53 26 0 chr15 12056614 12056652 -91438322 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 676 1150 61 0 20 chr15 12056652 12056789 -91438185 - B1_Mus1 SINE Alu -10 138 2 1 676 210 37 0 0 chr15 12056808 12056835 -91438139 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 676 1152 55 0 0 chr15 12056835 12056975 -91437999 - B1_Mus1 SINE Alu -3 145 6 1 676 245 314 81 5 chr15 12057382 12057568 -91437406 - L1MEd LINE L1 -5064 1055 856 1 676 589 241 21 0 chr15 12057733 12057878 -91437096 - B1F2 SINE Alu -1 148 1 1 676 33 0 0 0 chr15 12057889 12057922 -91437052 + AT_rich Low_complexity Low_complexity 1 33 0 1 676 373 282 92 25 chr15 12057932 12058052 -91436922 - RSINE1 SINE B4 -35 130 3 1 676 27 29 0 0 chr15 12058343 12058377 -91436597 + AT_rich Low_complexity Low_complexity 1 34 0 1 676 264 59 0 0 chr15 12058377 12058411 -91436563 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1 676 449 71 9 0 chr15 12058413 12058477 -91436497 - B2_Mm2 SINE B2 -102 114 47 1 84 1313 73 22 6 chr15 12058523 12058701 -91436273 - B2_Mm2 SINE B2 -14 181 1 1 677 404 239 125 25 chr15 12058792 12058912 -91436062 + B1_Mur2 SINE Alu 9 140 -9 1 677 198 0 0 0 chr15 12059239 12059261 -91435713 + (T)n Simple_repeat Simple_repeat 1 22 0 1 677 256 260 28 57 chr15 12059335 12059441 -91435533 - L1M2 LINE L1 -293 5887 5785 1 677 306 0 0 0 chr15 12059505 12059539 -91435435 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 677 270 0 0 0 chr15 12059539 12059568 -91435406 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 677 364 257 56 28 chr15 12059657 12059837 -91435137 - L1M2 LINE L1 -687 5484 5300 1 677 375 234 92 28 chr15 12059848 12059989 -91434985 - L1M2 LINE L1 -1438 4705 4556 1 677 331 315 18 27 chr15 12060219 12060330 -91434644 - PB1D10 SINE Alu -5 112 3 1 677 1132 61 7 0 chr15 12060603 12060750 -91434224 + B1_Mus1 SINE Alu 1 148 0 1 677 225 0 0 0 chr15 12060750 12060775 -91434199 + (A)n Simple_repeat Simple_repeat 1 25 0 1 677 336 167 54 27 chr15 12060789 12060863 -91434111 - HAL1 LINE L1 -900 1607 1532 1 677 432 0 0 0 chr15 12061353 12061401 -91433573 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 1 677 319 185 204 11 chr15 12061414 12061507 -91433467 - B1F2 SINE Alu -34 115 5 1 677 1134 79 0 0 chr15 12061658 12061798 -91433176 - B1_Mus2 SINE Alu -7 140 1 1 677 568 266 35 4 chr15 12061831 12061997 -91432977 - ID_B1 SINE B4 -8 216 49 1 677 694 184 96 62 chr15 12062026 12062235 -91432739 - B3 SINE B2 0 216 1 1 677 681 209 7 22 chr15 12062320 12062457 -91432517 - B1_Mur3 SINE Alu -14 135 1 1 677 352 266 260 23 chr15 12063091 12063264 -91431710 + ID_B1 SINE B4 1 214 -10 1 677 252 271 14 28 chr15 12063834 12063906 -91431068 - ID2 SINE ID -11 72 2 1 677 609 301 17 35 chr15 12064185 12064357 -91430617 - ID_B1 SINE B4 -45 179 11 1 677 210 369 36 9 chr15 12064520 12064632 -91430342 + RSINE1 SINE B4 47 161 -4 1 677 318 303 26 0 chr15 12064659 12064735 -91430239 + ID SINE ID 1 78 -146 1 677 295 365 10 0 chr15 12064735 12064763 -91430211 + BC1_Mm scRNA scRNA 1 105 -47 1 677 469 259 37 0 chr15 12064963 12065071 -91429903 - L3 LINE CR1 -199 4290 4179 1 677 21 36 0 0 chr15 12066103 12066131 -91428843 + AT_rich Low_complexity Low_complexity 1 28 0 1 677 214 337 0 0 chr15 12066226 12066327 -91428647 + (CTG)n Simple_repeat Simple_repeat 3 103 0 1 677 182 137 0 56 chr15 12066806 12066860 -91428114 + T-rich Low_complexity Low_complexity 1 51 0 1 677 1157 48 14 0 chr15 12066860 12067005 -91427969 - B1_Mus2 SINE Alu 0 147 1 1 677 33 54 0 26 chr15 12067261 12067310 -91427664 + AT_rich Low_complexity Low_complexity 1 48 0 1 677 1350 90 17 0 chr15 12067310 12067488 -91427486 + B2_Mm2 SINE B2 1 181 -14 1 677 33 54 0 26 chr15 12067488 12067514 -91427460 + AT_rich Low_complexity Low_complexity 1 26 0 1 677 868 268 5 5 chr15 12068420 12068604 -91426370 + ID_B1 SINE B4 1 184 -40 1 677 383 380 47 0 chr15 12068506 12068635 -91426339 + B1F1 SINE Alu 6 140 -9 1 677 281 292 137 63 chr15 12068847 12068942 -91426032 + PB1 SINE Alu 18 119 -8 1 677 204 125 0 0 chr15 12068942 12068974 -91426000 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 677 1408 70 11 0 chr15 12069423 12069610 -91425364 + B2_Mm1t SINE B2 3 191 -2 1 677 378 0 0 0 chr15 12071647 12071689 -91423285 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 677 243 0 0 0 chr15 12071790 12071817 -91423157 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 677 516 250 10 0 chr15 12071823 12071927 -91423047 - RSINE1 SINE B4 -30 135 31 2 677 221 155 207 0 chr15 12071964 12072022 -91422952 - B1_Mur3 SINE Alu 0 149 80 2 677 230 336 50 64 chr15 12072205 12072345 -91422629 - B1F2 SINE Alu -9 140 3 2 677 450 200 0 0 chr15 12073185 12073260 -91421714 + B3A SINE B2 1 75 -123 2 677 341 292 68 6 chr15 12073349 12073511 -91421463 - L1MA6 LINE L1 -64 6236 6065 2 677 24 0 0 0 chr15 12073909 12073933 -91421041 + AT_rich Low_complexity Low_complexity 1 24 0 2 677 434 270 40 0 chr15 12073984 12074084 -91420890 - PB1 SINE Alu -20 107 4 2 677 207 0 0 0 chr15 12074748 12074771 -91420203 + (CATTT)n Simple_repeat Simple_repeat 4 26 0 2 677 293 131 0 16 chr15 12075959 12076021 -91418953 + (CAG)n Simple_repeat Simple_repeat 1 61 0 2 677 489 289 103 0 chr15 12076299 12076493 -91418481 + MER2 DNA MER2_type 79 292 -53 2 677 21 82 0 0 chr15 12076664 12076713 -91418261 + AT_rich Low_complexity Low_complexity 1 49 0 2 677 510 276 122 21 chr15 12076833 12077022 -91417952 + ID_B1 SINE B4 4 211 -13 2 677 352 292 37 9 chr15 12077199 12077306 -91417668 + PB1D10 SINE Alu 2 111 -6 2 677 474 254 120 0 chr15 12077333 12077475 -91417499 + B3 SINE B2 3 161 -55 2 677 1329 81 11 21 chr15 12077501 12077690 -91417284 + B2_Mm1t SINE B2 2 188 -5 2 677 731 132 7 117 chr15 12077820 12077974 -91417000 - B1_Mur2 SINE Alu -12 137 1 2 677 27 29 0 0 chr15 12078151 12078185 -91416789 + AT_rich Low_complexity Low_complexity 1 34 0 2 677 311 317 39 70 chr15 12078401 12078530 -91416444 + B4 SINE B4 35 159 -133 2 677 392 259 17 51 chr15 12078852 12078970 -91416004 - PB1D10 SINE Alu 0 117 4 2 677 303 49 0 0 chr15 12079015 12079056 -91415918 + (T)n Simple_repeat Simple_repeat 1 41 0 2 677 761 161 53 8 chr15 12079056 12079187 -91415787 - B1_Mur1 SINE Alu 0 149 13 2 677 549 266 23 76 chr15 12079187 12079227 -91415747 - ID_B1 SINE B4 0 224 63 2 677 385 269 90 27 chr15 12080434 12080545 -91414429 + B1F SINE Alu 1 118 -31 2 677 243 103 0 0 chr15 12080554 12080593 -91414381 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 677 1120 124 31 26 chr15 12081556 12081590 -91413384 - B2_Mm2 SINE B2 -1 194 160 2 677 186 43 0 0 chr15 12081590 12081613 -91413361 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 2 677 1120 124 31 26 chr15 12081613 12081769 -91413205 - B2_Mm2 SINE B2 -36 159 3 2 677 267 274 96 0 chr15 12082130 12082203 -91412771 + ID SINE ID 3 82 -142 2 677 207 0 0 0 chr15 12082452 12082475 -91412499 + (TAG)n Simple_repeat Simple_repeat 1 23 0 2 677 719 340 47 22 chr15 12083563 12083924 -91411050 + Lx8 LINE L1 7099 7468 -5 2 677 354 217 118 11 chr15 12084063 12084156 -91410818 + B1_Mur1 SINE Alu 38 140 -9 2 677 779 235 58 34 chr15 12084372 12084579 -91410395 - B3 SINE B2 -3 213 2 2 677 981 135 7 0 chr15 12084823 12084971 -91410003 - B1_Mur4 SINE Alu -1 149 1 2 677 557 281 32 59 chr15 12085494 12085713 -91409261 + ID_B1 SINE B4 11 223 -1 2 677 533 275 57 14 chr15 12085792 12085932 -91409042 + RSINE1 SINE B4 12 157 -8 2 677 510 316 95 0 chr15 12086482 12086640 -91408334 + B3A SINE B2 1 173 -25 2 677 387 254 25 162 chr15 12086698 12086942 -91408032 - L1MB8 LINE L1 -46 6132 5929 2 677 1552 32 5 0 chr15 12086942 12087127 -91407847 - B2_Mm1a SINE B2 -6 187 2 2 677 387 254 25 162 chr15 12087127 12087202 -91407772 - L1MB8 LINE L1 -250 5928 5857 2 677 315 300 113 67 chr15 12087287 12087437 -91407537 - B4A SINE B4 -55 237 81 2 677 23 33 0 0 chr15 12087570 12087600 -91407374 + AT_rich Low_complexity Low_complexity 1 30 0 2 677 496 190 19 39 chr15 12088092 12088196 -91406778 - U6 snRNA snRNA -5 102 1 2 677 310 349 108 72 chr15 12088474 12088641 -91406333 + B4A SINE B4 3 175 -117 2 677 1087 60 175 0 chr15 12089041 12089207 -91405767 - B2_Mm2 SINE B2 0 195 1 2 677 751 234 21 42 chr15 12090499 12090691 -91404283 + B3A SINE B2 1 188 -10 2 677 702 34 0 0 chr15 12090833 12090921 -91404053 + BC1_Mm scRNA scRNA 1 88 -64 2 677 1128 116 6 6 chr15 12091345 12091366 -91403608 - B2_Mm1t SINE B2 -11 182 162 2 677 279 0 0 0 chr15 12091366 12091397 -91403577 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 2 677 1128 116 6 6 chr15 12091397 12091557 -91403417 - B2_Mm1t SINE B2 -32 161 2 2 677 339 254 124 33 chr15 12091564 12091690 -91403284 - B3A SINE B2 0 198 67 2 677 474 299 96 15 chr15 12092396 12092532 -91402442 - RSINE1 SINE B4 -8 157 11 2 677 364 212 108 126 chr15 12092691 12092858 -91402116 - Tigger7 DNA MER2_type 0 2491 2328 2 677 547 325 91 43 chr15 12093049 12093352 -91401622 - Tigger7 DNA MER2_type -2139 352 16 2 677 365 253 68 99 chr15 12093383 12093545 -91401429 + RSINE1 SINE B4 7 163 -2 2 677 425 228 71 24 chr15 12093666 12093792 -91401182 + ID_B1 SINE B4 92 223 -1 2 677 300 271 0 14 chr15 12094298 12094369 -91400605 + B4 SINE B4 11 80 -212 2 677 545 305 14 7 chr15 12094492 12094675 -91400299 + B3 SINE B2 1 186 -12 2 677 487 276 36 93 chr15 12094854 12094994 -91399980 + RSINE1 SINE B4 34 165 0 2 677 643 199 30 8 chr15 12095522 12095654 -91399320 + B3 SINE B2 81 215 -1 2 677 692 185 128 100 chr15 12099011 12099191 -91395783 + B3A SINE B2 2 186 -9 2 677 469 179 0 102 chr15 12099385 12099401 -91395573 + MT2B LTR ERVL 153 156 -445 2 677 812 113 8 0 chr15 12099401 12099525 -91395449 + B1_Mus2 SINE Alu 2 126 -21 2 677 250 280 30 70 chr15 12099539 12099639 -91395335 + PB1D10 SINE Alu 1 96 -21 2 677 499 269 138 0 chr15 12101797 12101927 -91393047 + RSINE1 SINE B4 5 152 -13 2 677 237 65 0 0 chr15 12102350 12102381 -91392593 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 677 1294 92 32 0 chr15 12102409 12102594 -91392380 + B2_Mm2 SINE B2 2 192 -3 2 677 832 94 17 0 chr15 12102598 12102715 -91392259 + PB1D9 SINE Alu 2 120 0 2 677 210 71 0 0 chr15 12102715 12102743 -91392231 + (A)n Simple_repeat Simple_repeat 1 28 0 2 677 1659 26 0 0 chr15 12102923 12103113 -91391861 - B2_Mm1a SINE B2 -2 191 2 2 677 396 138 0 0 chr15 12103262 12103327 -91391647 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 677 996 189 221 66 chr15 12103620 12103830 -91391144 - ORR1D1 LTR MaLR -4 370 153 2 677 2091 103 44 13 chr15 12103830 12104145 -91390829 - ORR1A2 LTR MaLR -2 325 1 2 677 996 189 221 66 chr15 12104145 12104250 -91390724 - ORR1D1 LTR MaLR -222 152 6 2 677 3835 207 67 28 chr15 12104250 12104975 -91389999 - ORR1D1-int LTR MaLR -3 1367 625 2 677 804 215 11 146 chr15 12104975 12105236 -91389738 + URR1A DNA MER1_type 1 226 0 2 677 3835 203 137 19 chr15 12105236 12105782 -91389192 - ORR1D1-int LTR MaLR -746 624 3 2 677 1388 212 128 0 chr15 12105790 12106111 -91388863 - ORR1D1 LTR MaLR -12 362 1 2 677 376 254 136 24 chr15 12106292 12106461 -91388513 - L1MC1 LINE L1 -8 6325 6138 2 677 378 276 218 52 chr15 12106531 12106671 -91388303 - L1MA5 LINE L1 -20 6280 6117 2 677 310 292 14 0 chr15 12106671 12106743 -91388231 + ID4 SINE ID 2 74 -9 2 677 378 276 218 52 chr15 12106743 12107060 -91387914 - L1MA5 LINE L1 -184 6116 5747 2 677 958 203 44 5 chr15 12107627 12107830 -91387144 - B3 SINE B2 -3 213 3 2 677 447 19 0 0 chr15 12107997 12108049 -91386925 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 677 398 284 52 0 chr15 12108063 12108179 -91386795 - RSINE1 SINE B4 -43 122 1 2 677 528 247 214 22 chr15 12108219 12108397 -91386577 + B3A SINE B2 5 216 0 2 677 180 0 0 0 chr15 12108444 12108464 -91386510 + (T)n Simple_repeat Simple_repeat 1 20 0 2 677 787 80 0 35 chr15 12108464 12108580 -91386394 - B1_Mus2 SINE Alu 0 147 36 2 677 394 230 19 48 chr15 12108491 12108596 -91386378 - MT2B LTR ERVL -323 278 177 2 677 320 304 137 47 chr15 12108615 12108826 -91386148 + L1MB8 LINE L1 5911 6140 -38 2 677 221 214 28 14 chr15 12108893 12108950 -91386024 + (TTGG)n Simple_repeat Simple_repeat 4 61 0 2 677 869 133 115 0 chr15 12108950 12109115 -91385859 - B2_Mm2 SINE B2 -9 186 3 2 677 221 214 28 14 chr15 12109115 12109128 -91385846 + (TTGG)n Simple_repeat Simple_repeat 3 15 0 2 677 323 287 70 42 chr15 12109460 12109602 -91385372 + B1F SINE Alu 1 146 -3 2 677 421 255 19 19 chr15 12109747 12109851 -91385123 - B1_Mus1 SINE Alu -5 143 40 2 677 227 54 0 26 chr15 12109866 12109904 -91385070 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 2 677 271 289 54 71 chr15 12109904 12110016 -91384958 - PB1 SINE Alu 0 127 18 2 677 540 0 0 0 chr15 12110066 12110126 -91384848 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 677 370 144 425 19 chr15 12111558 12111664 -91383310 + B1_Mur4 SINE Alu 2 150 0 2 677 250 303 88 44 chr15 12111681 12111795 -91383179 + PB1D9 SINE Alu 2 120 0 2 677 307 206 39 117 chr15 12112008 12112085 -91382889 + ID4 SINE ID 11 81 -2 2 677 781 283 17 0 chr15 12112123 12112296 -91382678 + B3 SINE B2 3 178 -38 2 677 273 194 40 40 chr15 12112657 12112732 -91382242 - B1_Mur1 SINE Alu -1 148 74 2 677 401 208 0 14 chr15 12112696 12112769 -91382205 + B1_Mur1 SINE Alu 53 124 -25 2 677 22 56 0 0 chr15 12112859 12112895 -91382079 + AT_rich Low_complexity Low_complexity 1 36 0 2 677 252 186 0 0 chr15 12113181 12113224 -91381750 - B1_Mur4 SINE Alu -9 141 99 2 677 283 236 41 14 chr15 12113219 12113292 -91381682 - B3A SINE B2 -123 75 1 2 677 1512 120 111 76 chr15 12115456 12115852 -91379122 - RMER17C LTR ERVK 0 410 1 2 677 355 202 89 0 chr15 12115936 12116015 -91378959 - RLTR40 LTR ERVK -731 86 1 2 677 522 278 153 7 chr15 12116015 12116316 -91378658 + L1_Mur3 LINE L1 3545 3889 -1991 2 677 305 291 37 25 chr15 12116317 12116336 -91378638 + B4 SINE B4 64 83 -209 3 677 401 161 0 16 chr15 12116336 12116399 -91378575 + B1_Mus1 SINE Alu 1 62 -86 3 677 755 279 63 16 chr15 12116497 12116752 -91378222 + Lx8 LINE L1 6363 6629 -844 3 677 1194 269 57 93 chr15 12116768 12116973 -91378001 + Lx8 LINE L1 6719 6924 -549 3 677 683 128 83 0 chr15 12116973 12117082 -91377892 + PB1D9 SINE Alu 3 120 0 3 677 1194 269 57 93 chr15 12117082 12117318 -91377656 + Lx8 LINE L1 6925 7144 -329 3 677 1117 203 90 84 chr15 12117574 12117896 -91377078 + ORR1C1 LTR MaLR 3 326 -52 3 677 944 62 329 0 chr15 12117905 12118051 -91376923 + B2_Mm2 SINE B2 2 195 0 3 677 1880 149 46 49 chr15 12118058 12118426 -91376548 - RLTR14 LTR ERV1 -15 367 1 3 677 366 226 68 62 chr15 12118490 12118636 -91376338 - Lx9 LINE L1 -1668 5976 5830 3 677 189 0 0 0 chr15 12118636 12118657 -91376317 + (T)n Simple_repeat Simple_repeat 1 21 0 3 677 1918 58 0 0 chr15 12118682 12118922 -91376052 - L1Md_A LINE L1 0 6582 6343 3 677 4493 55 0 42 chr15 12118922 12119330 -91375644 + L1Md_T LINE L1 5757 6155 -427 3 677 1773 10 0 0 chr15 12119330 12119523 -91375451 + B2_Mm1a SINE B2 1 193 0 3 677 4493 55 0 42 chr15 12119523 12119708 -91375266 + L1Md_T LINE L1 6156 6325 -257 3 677 929 293 75 35 chr15 12119706 12120106 -91374868 - Lx9 LINE L1 -38 5809 5394 3 677 1670 251 117 7 chr15 12120108 12120570 -91374404 - Lx5 LINE L1 -1 7049 6537 3 677 198 0 0 0 chr15 12120570 12120592 -91374382 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 3 677 955 136 29 0 chr15 12120638 12120778 -91374196 - B1_Mur4 SINE Alu -2 148 5 3 677 1316 76 48 26 chr15 12120786 12120975 -91373999 - B2_Mm2 SINE B2 -1 194 2 3 677 511 237 79 0 chr15 12120976 12121115 -91373859 - L1_Mur3 LINE L1 -425 5455 5306 3 677 605 216 17 8 chr15 12121118 12121235 -91373739 + PB1D9 SINE Alu 3 120 0 3 677 493 201 317 0 chr15 12121278 12121442 -91373532 + B3 SINE B2 1 216 0 3 677 252 295 9 35 chr15 12121460 12121576 -91373398 - L1M2 LINE L1 -799 5344 5232 3 677 207 0 0 0 chr15 12121619 12121642 -91373332 + (TC)n Simple_repeat Simple_repeat 2 24 0 3 677 186 71 0 0 chr15 12121642 12121669 -91373305 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 677 251 262 74 54 chr15 12122043 12122192 -91372782 + L1M5 LINE L1 5340 5491 -633 3 677 1171 53 0 7 chr15 12122208 12122359 -91372615 + B2_Mm2 SINE B2 25 174 -21 3 677 1226 55 0 7 chr15 12122487 12122635 -91372339 + B1_Mus1 SINE Alu 2 148 0 3 677 180 0 0 0 chr15 12122645 12122665 -91372309 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 677 1109 266 117 53 chr15 12123220 12123656 -91371318 - RLTR12B LTR ERVK -18 510 47 3 677 719 142 15 16 chr15 12125634 12125772 -91369202 + B1_Mur3 SINE Alu 5 150 0 3 677 198 0 0 0 chr15 12125852 12125874 -91369100 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 677 768 74 0 0 chr15 12125878 12125986 -91368988 + (TC)n Simple_repeat Simple_repeat 1 108 0 3 677 798 121 98 0 chr15 12125986 12126118 -91368856 - B1_Mur4 SINE Alu -4 146 2 3 677 425 245 19 10 chr15 12126848 12126951 -91368023 + B1F1 SINE Alu 41 144 -5 3 677 312 280 123 33 chr15 12127295 12127417 -91367557 - ID_B1 SINE B4 -12 212 80 3 677 1523 201 72 61 chr15 12127490 12127950 -91367024 - Lx7 LINE L1 0 7696 7232 3 677 1266 34 0 0 chr15 12128277 12128423 -91366551 - B1_Mm SINE Alu -1 146 1 3 677 244 316 25 33 chr15 12128646 12128767 -91366207 + ID_B1 SINE B4 98 217 -7 3 677 243 284 102 0 chr15 12129023 12129111 -91365863 + PB1D7 SINE Alu 24 120 0 3 677 210 128 0 0 chr15 12129258 12129297 -91365677 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 677 591 361 0 6 chr15 12129305 12129461 -91365513 - B3A SINE B2 -30 168 14 3 677 819 214 16 32 chr15 12129483 12129671 -91365303 - B2_Mm2 SINE B2 -10 185 1 3 677 1353 53 0 17 chr15 12130231 12130405 -91364569 + B2_Mm2 SINE B2 2 172 -23 3 677 918 125 0 0 chr15 12130410 12130554 -91364420 + (GAAA)n Simple_repeat Simple_repeat 3 146 0 3 677 1142 69 14 0 chr15 12130650 12130794 -91364180 + B1_Mus2 SINE Alu 2 147 0 3 677 594 263 123 118 chr15 12131006 12131217 -91363757 + B4 SINE B4 81 292 0 3 677 250 307 0 39 chr15 12131286 12131364 -91363610 - L2c LINE L2 -1 3386 3312 3 677 740 249 4 21 chr15 12131516 12131717 -91363257 - B3 SINE B2 -7 188 1 3 677 855 138 58 0 chr15 12131906 12132044 -91362930 + B1_Mus2 SINE Alu 2 147 0 3 677 737 310 149 50 chr15 12132083 12132565 -91362409 - MT2A LTR ERVL -1 532 3 3 677 353 236 151 108 chr15 12132566 12132739 -91362235 + B3A SINE B2 3 184 -11 3 677 1211 55 0 0 chr15 12132739 12132884 -91362090 + B1_Mus1 SINE Alu 4 148 0 3 677 270 236 151 108 chr15 12132884 12132895 -91362079 + B2_Mm2 SINE B2 185 195 0 3 677 291 54 0 0 chr15 12132895 12132932 -91362042 + (A)n Simple_repeat Simple_repeat 1 37 0 3 677 453 273 80 70 chr15 12132978 12133113 -91361861 - MLT1A0 LTR MaLR -18 347 210 3 677 1269 83 78 0 chr15 12133113 12133293 -91361681 - B2_Mm2 SINE B2 0 195 2 3 677 453 273 80 70 chr15 12133293 12133370 -91361604 - MLT1A0 LTR MaLR -156 209 133 3 677 333 267 44 11 chr15 12133844 12133935 -91361039 - PB1D7 SINE Alu -18 102 9 3 677 306 0 0 0 chr15 12134208 12134242 -91360732 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 677 225 321 0 9 chr15 12134811 12134921 -91360053 + (CCG)n Simple_repeat Simple_repeat 3 111 0 3 677 21 114 0 0 chr15 12135042 12135147 -91359827 + GC_rich Low_complexity Low_complexity 1 105 0 3 677 375 301 80 51 chr15 12135523 12135698 -91359276 - L2a LINE L2 -3 3423 3244 3 677 723 145 78 28 chr15 12135960 12136102 -91358872 - B1_Mur2 SINE Alu 0 149 1 3 677 232 270 27 0 chr15 12137119 12137193 -91357781 - ID4_ SINE ID -6 77 2 3 677 469 204 127 88 chr15 12137900 12138070 -91356904 + B3A SINE B2 24 192 -6 3 677 497 233 128 30 chr15 12138084 12138217 -91356757 + RSINE1 SINE B4 20 165 0 3 677 922 225 50 0 chr15 12138600 12138800 -91356174 - B3 SINE B2 -5 211 2 3 677 256 215 36 48 chr15 12139148 12139231 -91355743 - MIRb SINE MIR -96 172 91 3 677 485 166 309 0 chr15 12139317 12139492 -91355482 + MTD LTR MaLR 180 408 -11 3 677 388 257 0 76 chr15 12140049 12140167 -91354807 - PB1D10 SINE Alu -8 109 1 3 677 184 91 22 22 chr15 12140291 12140336 -91354638 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 3 677 953 142 7 13 chr15 12140338 12140488 -91354486 - B1_Mur4 SINE Alu -1 149 1 3 677 664 159 18 0 chr15 12140582 12140695 -91354279 - B1_Mus2 SINE Alu -32 115 1 3 677 380 277 100 0 chr15 12140695 12140706 -91354268 - B4 SINE B4 -79 173 71 3 677 340 292 72 53 chr15 12140742 12140894 -91354080 - RSINE1 SINE B4 -10 155 1 3 677 690 138 110 0 chr15 12140978 12141087 -91353887 - B1_Mus1 SINE Alu 0 148 28 3 677 258 273 39 0 chr15 12141213 12141306 -91353668 - ID4_ SINE ID -51 101 6 3 677 324 0 0 0 chr15 12141739 12141775 -91353199 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 677 246 132 0 0 chr15 12142013 12142066 -91352908 + (TCTCTG)n Simple_repeat Simple_repeat 6 58 0 3 677 378 247 118 0 chr15 12142353 12142446 -91352528 + B1_Mur1 SINE Alu 41 144 -5 3 677 468 302 0 0 chr15 12142460 12142579 -91352395 - PB1D9 SINE Alu 0 120 2 3 677 929 209 21 21 chr15 12142602 12142793 -91352181 - B3A SINE B2 -6 192 2 3 677 217 320 10 40 chr15 12142800 12142901 -91352073 - B1F SINE Alu 0 149 52 3 677 197 170 80 60 chr15 12143205 12143255 -91351719 + MIRb SINE MIR 208 258 -10 3 677 213 121 0 0 chr15 12143267 12143300 -91351674 + (TCC)n Simple_repeat Simple_repeat 1 33 0 3 677 337 320 23 38 chr15 12144089 12144222 -91350752 + B1F SINE Alu 6 136 -13 3 677 194 378 78 21 chr15 12144939 12145131 -91349843 + MIRb SINE MIR 66 268 0 3 677 359 293 25 25 chr15 12145863 12145982 -91348992 + MIRb SINE MIR 111 229 -39 3 677 181 266 155 31 chr15 12146274 12146371 -91348603 + MIRb SINE MIR 92 200 -68 3 677 324 231 0 0 chr15 12147020 12147098 -91347876 + T-rich Low_complexity Low_complexity 1 78 0 3 677 955 100 7 0 chr15 12147098 12147238 -91347736 - B1_Mur4 SINE Alu 0 150 10 3 677 216 0 0 0 chr15 12147354 12147378 -91347596 + (T)n Simple_repeat Simple_repeat 1 24 0 3 677 1118 95 0 0 chr15 12147378 12147525 -91347449 - B1_Mus1 SINE Alu 0 148 2 3 677 297 0 0 0 chr15 12148091 12148124 -91346850 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 677 189 121 0 0 chr15 12148259 12148292 -91346682 + (T)n Simple_repeat Simple_repeat 1 33 0 3 677 1077 49 7 78 chr15 12148293 12148447 -91346527 - B1_Mus2 SINE Alu 0 147 5 3 677 463 207 311 0 chr15 12148608 12148772 -91346202 + ID_B1 SINE B4 10 224 0 3 677 325 295 125 31 chr15 12148779 12148937 -91346037 + MIRc SINE MIR 22 197 -79 3 677 198 103 0 0 chr15 12149290 12149319 -91345655 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 3 677 210 330 48 109 chr15 12150172 12150420 -91344554 - L2c LINE L2 -21 3366 3134 3 677 357 225 90 84 chr15 12150996 12151151 -91343823 + ID_B1 SINE B4 54 209 -15 3 677 216 225 0 0 chr15 12151527 12151567 -91343407 + T-rich Low_complexity Low_complexity 1 40 0 3 677 2280 153 71 2 chr15 12151574 12151968 -91343006 + MTC LTR MaLR 1 421 0 3 677 729 264 105 22 chr15 12152006 12152273 -91342701 - B4A SINE B4 0 292 4 3 677 1112 107 89 11 chr15 12153513 12153692 -91341282 - B2_Mm2 SINE B2 -1 194 2 4 677 424 291 44 15 chr15 12153795 12153931 -91341043 - B1F SINE Alu -9 140 1 4 677 261 0 0 0 chr15 12153943 12153972 -91341002 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 677 565 281 27 0 chr15 12153980 12154126 -91340848 - B3 SINE B2 -1 215 66 4 677 407 202 121 0 chr15 12154230 12154329 -91340645 - B3A SINE B2 -87 111 1 4 677 421 191 48 0 chr15 12154340 12154424 -91340550 - PB1D7 SINE Alu -7 113 26 4 677 21 0 0 0 chr15 12154438 12154459 -91340515 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 1251 97 28 11 chr15 12154485 12154662 -91340312 - B2_Mm2 SINE B2 -14 181 2 4 677 447 122 0 0 chr15 12154797 12154887 -91340087 + (GA)n Simple_repeat Simple_repeat 1 90 0 4 677 250 283 113 21 chr15 12155879 12156020 -91338954 + ORR1D1 LTR MaLR 87 240 -134 4 677 246 256 144 72 chr15 12156160 12156188 -91338786 - ID_B1 SINE B4 -4 220 155 4 677 264 279 116 0 chr15 12156188 12156274 -91338700 - PB1D10 SINE Alu -21 96 1 4 677 246 256 144 72 chr15 12156274 12156314 -91338660 - ID_B1 SINE B4 -4 154 53 4 677 345 273 73 53 chr15 12156440 12156591 -91338383 + MIR SINE MIR 107 260 -2 4 677 317 236 109 98 chr15 12158544 12158585 -91336389 - B2_Mm2 SINE B2 0 195 1 4 677 479 287 92 13 chr15 12158585 12158737 -91336237 - RSINE1 SINE B4 0 165 2 4 677 709 234 0 7 chr15 12158741 12158883 -91336091 - ID_B1 SINE B4 -1 223 83 4 677 248 292 28 0 chr15 12158901 12158973 -91336001 - B4A SINE B4 -2 290 217 4 677 315 0 0 0 chr15 12158993 12159028 -91335946 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 677 1112 88 0 0 chr15 12159044 12159191 -91335783 + B1_Mus2 SINE Alu 1 147 0 4 677 1455 51 17 0 chr15 12159199 12159377 -91335597 - B2_Mm2 SINE B2 -14 181 1 4 677 720 248 168 19 chr15 12159380 12159594 -91335380 - B4A SINE B4 -41 251 6 4 677 215 317 67 0 chr15 12159619 12159679 -91335295 - ID SINE ID -135 89 26 4 677 537 312 14 35 chr15 12159722 12159865 -91335109 + RSINE1 SINE B4 19 158 -7 4 677 183 80 0 0 chr15 12159999 12160024 -91334950 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 4 677 371 244 31 12 chr15 12160765 12160876 -91334098 - PB1D10 SINE Alu -21 128 17 4 677 295 281 52 0 chr15 12162136 12162232 -91332742 + B1F SINE Alu 41 141 -8 4 677 567 224 15 53 chr15 12163913 12164045 -91330929 - RSINE1 SINE B4 -36 129 3 4 677 243 269 25 119 chr15 12164069 12164187 -91330787 - PB1D10 SINE Alu 0 117 11 4 677 319 196 54 0 chr15 12164321 12164377 -91330597 + B1_Mus2 SINE Alu 62 120 -27 4 677 796 223 115 35 chr15 12164708 12164908 -91330066 - B3 SINE B2 0 216 1 4 677 396 0 0 0 chr15 12164918 12164962 -91330012 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 677 513 110 0 0 chr15 12164962 12165053 -91329921 + (GA)n Simple_repeat Simple_repeat 2 92 0 4 677 527 256 34 0 chr15 12165067 12165184 -91329790 - B3A SINE B2 -77 121 1 4 677 770 143 0 0 chr15 12165271 12165383 -91329591 + B1_Mus1 SINE Alu 32 143 -5 4 677 495 171 41 46 chr15 12165400 12165596 -91329378 + RMER17C LTR ERVK 80 274 -136 4 677 2886 34 112 0 chr15 12166291 12166647 -91328327 - MTA_Mm LTR MaLR 0 396 1 4 677 377 230 30 168 chr15 12167087 12167254 -91327720 - B1F1 SINE Alu -1 148 5 4 677 551 205 285 0 chr15 12167149 12167300 -91327674 - ID_B1 SINE B4 -26 198 5 4 677 184 217 113 32 chr15 12167445 12167507 -91327467 - L3 LINE CR1 -2129 2360 2294 4 677 365 322 11 0 chr15 12167809 12167927 -91327047 - PB1D10 SINE Alu -18 129 6 4 677 2518 135 52 2 chr15 12168243 12168644 -91326330 - MTC LTR MaLR 0 421 1 4 677 282 56 0 0 chr15 12168704 12168740 -91326234 + (TTTC)n Simple_repeat Simple_repeat 4 39 0 4 677 701 358 36 14 chr15 12168801 12169076 -91325898 + B4A SINE B4 6 286 -6 4 677 922 116 76 60 chr15 12169180 12169364 -91325610 + B2_Mm2 SINE B2 2 188 -7 4 677 218 355 72 9 chr15 12169570 12169681 -91325293 - L2c LINE L2 -3 3384 3267 4 677 425 192 94 94 chr15 12169904 12170042 -91324932 - B4 SINE B4 -74 218 81 4 677 580 202 8 40 chr15 12170056 12170180 -91324794 - PB1D9 SINE Alu 0 120 1 4 677 216 0 0 0 chr15 12170180 12170204 -91324770 + (T)n Simple_repeat Simple_repeat 1 24 0 4 677 294 265 12 24 chr15 12170204 12170289 -91324685 - B4 SINE B4 -206 86 3 4 677 1002 315 73 48 chr15 12170294 12170978 -91323996 - L1M2 LINE L1 -3218 2925 2213 4 677 462 243 78 62 chr15 12170978 12171171 -91323803 - B3A SINE B2 -1 197 2 4 677 753 315 73 48 chr15 12171171 12171212 -91323762 - L1M2 LINE L1 -3635 2212 2172 4 677 277 303 72 7 chr15 12171428 12171582 -91323392 - L1M2 LINE L1 -4277 2572 2440 4 677 1216 54 0 0 chr15 12171586 12171733 -91323241 - B1_Mus1 SINE Alu 0 148 2 4 677 361 354 69 0 chr15 12171873 12172003 -91322971 - B1F SINE Alu -10 139 1 4 677 199 106 20 41 chr15 12172005 12172054 -91322920 + T-rich Low_complexity Low_complexity 5 52 0 4 677 528 262 202 52 chr15 12172098 12172291 -91322683 - B4A SINE B4 -1 291 70 4 677 605 290 86 59 chr15 12172311 12172531 -91322443 - B4A SINE B4 -66 226 1 4 677 724 210 22 0 chr15 12172687 12172825 -91322149 + B1F2 SINE Alu 3 143 -6 4 677 251 245 0 0 chr15 12172907 12172956 -91322018 - B1F2 SINE Alu -87 62 14 4 677 369 261 125 0 chr15 12173063 12173151 -91321823 - PB1D7 SINE Alu -3 117 19 4 677 825 220 94 5 chr15 12173192 12173384 -91321590 - B3 SINE B2 -6 210 2 4 677 739 268 27 63 chr15 12174112 12174335 -91320639 + B3A SINE B2 2 216 0 4 677 555 292 34 27 chr15 12174380 12174528 -91320446 + RSINE1 SINE B4 15 163 -2 4 677 230 226 0 139 chr15 12174882 12174954 -91320020 - B2_Mm2 SINE B2 -32 163 102 4 677 783 150 0 0 chr15 12174994 12175134 -91319840 + (TG)n Simple_repeat Simple_repeat 1 140 0 4 677 1504 215 97 6 chr15 12175190 12175541 -91319433 - MT2A LTR ERVL -150 383 1 4 677 255 224 171 0 chr15 12175541 12175615 -91319359 - B3A SINE B2 -76 122 36 4 677 658 164 45 0 chr15 12175620 12175730 -91319244 + B1_Mur2 SINE Alu 1 115 -34 4 677 335 287 89 45 chr15 12175730 12175767 -91319207 + B4A SINE B4 101 233 -59 4 677 284 169 98 33 chr15 12175876 12175968 -91319006 - L2 LINE L2 -546 2873 2776 4 677 609 299 26 26 chr15 12177243 12177435 -91317539 + B3A SINE B2 1 192 -6 4 677 225 371 66 7 chr15 12177514 12177666 -91317308 - L1MC5 LINE L1 -100 7861 7701 4 677 584 213 79 0 chr15 12177726 12177853 -91317121 - B1_Mur2 SINE Alu 0 149 13 4 677 247 138 27 27 chr15 12177964 12178025 -91316949 - PB1D7 SINE Alu -3 124 66 4 677 715 235 14 95 chr15 12178302 12178523 -91316451 + B3 SINE B2 1 203 -13 4 677 258 32 0 0 chr15 12178525 12178556 -91316418 + (T)n Simple_repeat Simple_repeat 1 31 0 4 677 2493 229 97 63 chr15 12178824 12179695 -91315279 - RMER19B LTR ERVK -13 889 48 4 677 410 313 30 7 chr15 12179674 12179809 -91315165 - RMER19B LTR ERVK -552 185 48 4 677 424 298 23 8 chr15 12179793 12179925 -91315049 - RMER19B LTR ERVK -557 180 47 4 677 387 202 60 0 chr15 12179895 12179979 -91314995 - RMER19B LTR ERVK -765 137 49 4 677 633 226 52 0 chr15 12180008 12180224 -91314750 - RMER19B LTR ERVK -407 204 1 4 677 249 285 80 58 chr15 12180258 12180396 -91314578 + MIR SINE MIR 115 255 -7 4 677 629 213 96 0 chr15 12180445 12180581 -91314393 - B1_Mur3 SINE Alu 0 149 1 4 677 225 280 24 139 chr15 12180806 12180972 -91314002 - MIR3 SINE MIR -55 153 7 4 677 333 264 101 67 chr15 12181782 12181961 -91313013 - MER102a DNA MER1_type -85 245 61 4 677 510 309 199 39 chr15 12182034 12182114 -91312860 - Charlie1 DNA MER1_type -32 2749 2655 4 677 556 210 81 0 chr15 12182114 12182238 -91312736 + B1F SINE Alu 1 134 -15 4 677 510 309 199 39 chr15 12182238 12182588 -91312386 - Charlie1 DNA MER1_type -127 2654 2251 4 677 1241 107 11 6 chr15 12182592 12182770 -91312204 + B2_Mm1t SINE B2 1 179 -14 4 677 369 101 65 20 chr15 12182802 12182910 -91312064 + B2_Mm2 SINE B2 47 195 0 4 677 548 266 231 19 chr15 12182910 12183221 -91311753 - Charlie1 DNA MER1_type -523 2258 1882 4 677 369 287 7 59 chr15 12183346 12183498 -91311476 - Lx9 LINE L1 -117 7527 7384 4 677 357 317 40 27 chr15 12183492 12183641 -91311333 + Lx9 LINE L1 7205 7355 -289 4 677 226 299 39 13 chr15 12183646 12183724 -91311250 - Charlie1 DNA MER1_type -1265 1516 1442 4 677 1148 83 0 0 chr15 12184496 12184641 -91310333 + B1_Mus1 SINE Alu 2 146 -2 4 677 242 89 0 130 chr15 12184644 12184680 -91310294 + A-rich Low_complexity Low_complexity 1 28 0 4 677 1305 14 0 0 chr15 12184680 12184826 -91310148 + B1_Mus2 SINE Alu 1 146 -1 4 677 242 89 0 130 chr15 12184826 12184866 -91310108 + A-rich Low_complexity Low_complexity 29 67 0 4 677 212 59 29 0 chr15 12185424 12185458 -91309516 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 4 677 499 276 65 8 chr15 12185464 12185588 -91309386 - RSINE1 SINE B4 -31 134 4 4 677 221 361 83 0 chr15 12186952 12187085 -91307889 + MIR SINE MIR 69 212 -50 4 677 1218 61 0 0 chr15 12188673 12188820 -91306154 + B1_Mus2 SINE Alu 1 147 0 4 677 210 91 0 0 chr15 12188820 12188853 -91306121 + (A)n Simple_repeat Simple_repeat 1 33 0 4 677 310 173 25 74 chr15 12188853 12188934 -91306040 - RLTR25B LTR ERVK -505 523 447 4 677 553 191 62 26 chr15 12188862 12188975 -91305999 - B1_Mus1 SINE Alu -31 117 1 4 677 2682 113 29 17 chr15 12189526 12189664 -91305310 + Lx LINE L1 6231 6368 -286 4 84 3569 25 0 0 chr15 12189664 12190060 -91304914 - MTA_Mm LTR MaLR 0 396 1 4 678 2682 113 29 17 chr15 12190060 12190334 -91304640 + Lx LINE L1 6369 6648 -6 4 678 588 211 127 8 chr15 12190339 12190473 -91304501 + B1_Mur4 SINE Alu 1 150 0 4 678 558 311 132 15 chr15 12191117 12191444 -91303530 - L1MA9 LINE L1 -301 6011 5647 4 678 405 39 0 0 chr15 12191446 12191497 -91303477 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 678 642 290 33 57 chr15 12192380 12192592 -91302382 + B4 SINE B4 86 292 0 5 678 215 287 87 61 chr15 12194131 12194246 -91300728 - PB1 SINE Alu -4 123 6 5 678 476 265 10 0 chr15 12194473 12194571 -91300403 + ID_B1 SINE B4 95 193 -31 5 678 289 337 11 0 chr15 12194486 12194581 -91300393 - YREP_Mm Unknown Unknown -1522 290 195 5 678 316 229 121 0 chr15 12195474 12195557 -91299417 + B4A SINE B4 75 167 -125 5 678 545 45 0 0 chr15 12195496 12195563 -91299411 + B1_Mus1 SINE Alu 21 87 -61 5 678 247 359 14 76 chr15 12195978 12196169 -91298805 + MIRb SINE MIR 2 187 -81 5 678 270 0 0 0 chr15 12196540 12196570 -91298404 + (CACCC)n Simple_repeat Simple_repeat 1 30 0 5 678 922 198 28 52 chr15 12196905 12197118 -91297856 - B3 SINE B2 -8 208 1 5 678 1449 88 5 5 chr15 12197132 12197327 -91297647 - B2_Mm2 SINE B2 0 195 1 5 678 344 321 19 9 chr15 12198213 12198320 -91296654 - B1F SINE Alu -37 112 5 5 678 401 191 69 90 chr15 12198730 12198874 -91296100 + B1F2 SINE Alu 2 142 -7 5 678 201 74 0 0 chr15 12199167 12199194 -91295780 + (TTA)n Simple_repeat Simple_repeat 2 28 0 5 678 384 22 0 0 chr15 12200237 12200282 -91294692 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 678 21 36 0 0 chr15 12201523 12201551 -91293423 + AT_rich Low_complexity Low_complexity 1 28 0 5 678 24 0 0 0 chr15 12201844 12201868 -91293106 + AT_rich Low_complexity Low_complexity 1 24 0 5 678 240 208 50 100 chr15 12202261 12202341 -91292633 + B3A SINE B2 2 77 -121 5 678 541 268 58 7 chr15 12202274 12202413 -91292561 + RSINE1 SINE B4 12 157 -8 5 678 986 215 24 19 chr15 12202910 12203119 -91291855 - B3 SINE B2 -3 213 4 5 678 806 266 110 8 chr15 12203550 12203804 -91291170 + MTEa LTR MaLR 44 323 -56 5 678 622 176 125 23 chr15 12204312 12204440 -91290534 + B1_Mus1 SINE Alu 1 141 -7 5 678 1108 104 30 6 chr15 12204755 12204920 -91290054 + B2_Mm2 SINE B2 2 170 -25 5 678 513 146 9 38 chr15 12204921 12205017 -91289957 + B1_Mus2 SINE Alu 2 98 -29 5 678 281 254 14 27 chr15 12205088 12205161 -91289813 + ID4_ SINE ID 1 72 -11 5 678 1008 122 0 7 chr15 12205295 12205444 -91289530 - B1_Mur1 SINE Alu -1 148 1 5 678 351 0 0 0 chr15 12205838 12205877 -91289097 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 678 315 93 0 0 chr15 12206240 12206257 -91288717 + (A)n Simple_repeat Simple_repeat 1 17 0 5 678 1094 69 14 0 chr15 12206257 12206401 -91288573 + B1_Mus2 SINE Alu 1 146 -1 5 678 315 93 0 0 chr15 12206401 12206437 -91288537 + (A)n Simple_repeat Simple_repeat 1 36 0 5 678 1178 95 47 0 chr15 12206442 12206611 -91288363 - B2_Mm2 SINE B2 -14 181 5 5 678 23 33 0 0 chr15 12206614 12206644 -91288330 + AT_rich Low_complexity Low_complexity 1 30 0 5 678 833 160 276 0 chr15 12206644 12206800 -91288174 - B3 SINE B2 -14 202 4 5 678 259 273 191 40 chr15 12206866 12206992 -91287982 + MIRb SINE MIR 3 147 -121 5 678 1303 75 17 17 chr15 12207074 12207250 -91287724 + B2_Mm2 SINE B2 2 177 -18 5 678 628 287 51 6 chr15 12207403 12207578 -91287396 + B3A SINE B2 1 183 -15 5 678 595 256 118 27 chr15 12207887 12208108 -91286866 - RMER15 LTR ERVL -58 517 277 5 678 879 193 75 10 chr15 12208108 12208307 -91286667 + RMER1C Other Other 1129 1340 -2 5 678 450 154 0 0 chr15 12208320 12208398 -91286576 + GA-rich Low_complexity Low_complexity 4 81 0 5 678 285 196 41 103 chr15 12208399 12208496 -91286478 - RMER15 LTR ERVL -406 169 79 5 678 1269 52 45 34 chr15 12208559 12208738 -91286236 + B2_Mm2 SINE B2 1 181 -14 5 678 691 136 120 0 chr15 12208766 12208891 -91286083 - URR1B DNA MER1_type -3 222 83 5 678 311 228 61 61 chr15 12208896 12208994 -91285980 - RMER15 LTR ERVL -475 100 3 5 678 452 289 68 77 chr15 12209050 12209271 -91285703 - MTEa LTR MaLR -159 220 2 5 678 2494 107 102 5 chr15 12209389 12209773 -91285201 + MTC LTR MaLR 1 421 0 5 678 401 344 79 12 chr15 12209848 12209993 -91284981 - LTR16C LTR ERVL 0 489 333 5 678 1019 139 81 0 chr15 12209993 12210165 -91284809 + B2_Mm2 SINE B2 1 186 -9 5 678 401 344 79 12 chr15 12210165 12210178 -91284796 - LTR16C LTR ERVL -157 332 320 5 678 674 262 122 0 chr15 12210178 12210350 -91284624 + B3A SINE B2 3 195 -3 5 678 450 281 44 0 chr15 12210363 12210498 -91284476 + B1_Mur1 SINE Alu 1 141 -8 5 678 402 121 0 0 chr15 12210506 12210572 -91284402 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 678 2346 296 88 78 chr15 12211359 12211813 -91283161 - Lx8 LINE L1 -2 7471 6959 5 678 369 0 0 0 chr15 12211813 12211854 -91283120 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 678 2346 296 88 78 chr15 12211854 12212172 -91282802 - Lx8 LINE L1 -515 6958 6684 5 678 1231 41 0 7 chr15 12212172 12212318 -91282656 - B1_Mus1 SINE Alu -3 145 1 5 678 2346 296 88 78 chr15 12212318 12212722 -91282252 - Lx8 LINE L1 -790 6683 6283 5 678 285 29 0 0 chr15 12212753 12212787 -91282187 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 678 278 301 86 50 chr15 12212887 12213027 -91281947 + MER20 DNA MER1_type 70 214 -5 5 678 605 252 176 25 chr15 12213367 12213611 -91281363 - B4 SINE B4 -11 281 1 5 678 1870 162 54 17 chr15 12214028 12214379 -91280595 - ORR1D1 LTR MaLR -8 366 3 5 678 258 106 0 0 chr15 12216121 12216168 -91278806 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 5 678 2321 106 19 3 chr15 12216703 12217025 -91277949 - ORR1A2 LTR MaLR 0 327 1 5 678 851 271 126 8 chr15 12217462 12217943 -91277031 + L1MA5 LINE L1 5522 6064 -227 5 678 435 149 0 0 chr15 12218051 12218125 -91276849 + (GGGGA)n Simple_repeat Simple_repeat 5 78 0 5 678 422 250 0 46 chr15 12218127 12218236 -91276738 + B4A SINE B4 125 228 -64 5 678 673 311 0 10 chr15 12218241 12218436 -91276538 - Lx8 LINE L1 -454 7019 6827 5 678 433 290 64 47 chr15 12218553 12218840 -91276134 + RLTR12B LTR ERVK 232 507 -20 5 678 1249 54 0 0 chr15 12219592 12219739 -91275235 + B1_Mm SINE Alu 1 147 0 5 678 23 0 0 0 chr15 12219739 12219762 -91275212 + AT_rich Low_complexity Low_complexity 1 23 0 5 678 2284 212 101 38 chr15 12219829 12220511 -91274463 - Lx9 LINE L1 -5 7639 6915 5 678 552 15 0 0 chr15 12220544 12220609 -91274365 + (GA)n Simple_repeat Simple_repeat 2 66 0 5 678 304 169 47 40 chr15 12220857 12221005 -91273969 + (TATAA)n Simple_repeat Simple_repeat 3 151 0 5 678 2248 154 31 20 chr15 12221501 12221891 -91273083 + ORR1B1 LTR MaLR 1 394 0 5 678 3488 30 2 0 chr15 12222098 12222493 -91272481 - MTA_Mm LTR MaLR 0 396 1 5 678 910 195 115 5 chr15 12222528 12222719 -91272255 - B3 SINE B2 -4 212 1 5 678 1235 41 0 0 chr15 12222785 12222932 -91272042 + B1_Mus1 SINE Alu 2 148 0 5 678 1080 157 25 5 chr15 12223154 12223353 -91271621 - URR1A DNA MER1_type -22 204 2 5 678 223 335 77 53 chr15 12223715 12223775 -91271199 + B4 SINE B4 32 95 -197 5 678 394 231 41 8 chr15 12223775 12223897 -91271077 + B1_Mus1 SINE Alu 3 128 -20 5 678 248 206 14 42 chr15 12223915 12223986 -91270988 + B4A SINE B4 1 69 -223 5 678 21 0 0 0 chr15 12223988 12224009 -91270965 + AT_rich Low_complexity Low_complexity 1 21 0 5 678 1038 82 7 7 chr15 12224009 12224145 -91270829 + B1_Mur4 SINE Alu 1 136 -14 5 678 438 20 0 0 chr15 12224151 12224202 -91270772 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 678 354 198 111 0 chr15 12224219 12224300 -91270674 + B3A SINE B2 1 90 -108 5 678 403 255 52 90 chr15 12225064 12225219 -91269755 + RSINE1 SINE B4 10 158 -7 5 678 1420 187 12 63 chr15 12225272 12225603 -91269371 - Lx4B LINE L1 -6 7052 6739 5 678 234 0 0 0 chr15 12225606 12225632 -91269342 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 5 678 29 28 0 0 chr15 12225950 12225986 -91268988 + AT_rich Low_complexity Low_complexity 1 36 0 5 678 323 231 112 32 chr15 12226282 12226407 -91268567 - B3A SINE B2 0 198 64 5 678 371 83 27 14 chr15 12226409 12226482 -91268492 + L1_Mus3 LINE L1 6488 6561 -77 5 678 1328 62 96 0 chr15 12226593 12226617 -91268357 - B2_Mm2 SINE B2 0 195 172 5 678 182 62 31 0 chr15 12226617 12226649 -91268325 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 678 1328 62 96 0 chr15 12226649 12226802 -91268172 - B2_Mm2 SINE B2 -24 171 2 5 678 1761 208 23 25 chr15 12226897 12227292 -91267682 - ORR1B1 LTR MaLR 0 394 1 5 678 716 288 73 0 chr15 12227313 12227518 -91267456 + ID_B1 SINE B4 5 224 0 5 678 483 18 0 0 chr15 12227529 12227585 -91267389 + (GGAGA)n Simple_repeat Simple_repeat 2 57 0 5 678 1387 75 37 11 chr15 12227585 12227774 -91267200 + B2_Mm2 SINE B2 2 195 0 5 678 2099 142 47 3 chr15 12227969 12228328 -91266646 + RLTR14 LTR ERV1 7 381 -1 5 678 291 103 364 36 chr15 12228872 12228982 -91265992 - B2_Mm2 SINE B2 -3 192 47 5 678 1064 139 35 0 chr15 12229048 12229220 -91265754 - B2_Mm1t SINE B2 -14 179 2 5 678 580 131 0 34 chr15 12229222 12229337 -91265637 - B1_Mur4 SINE Alu -1 119 18 5 678 456 311 96 0 chr15 12229397 12229532 -91265442 - RSINE1 SINE B4 -17 148 1 5 678 439 250 108 13 chr15 12229545 12229703 -91265271 - MER54A LTR ERVL -683 218 46 5 678 279 297 0 62 chr15 12229699 12229810 -91265164 - ID4 SINE ID -46 106 6 5 678 280 267 46 28 chr15 12230004 12230112 -91264862 + MamGypLTR2b LTR Gypsy 799 908 -14 5 678 583 264 106 10 chr15 12230213 12230412 -91264562 + B4 SINE B4 1 218 -74 5 678 644 228 44 6 chr15 12230415 12230574 -91264400 + B4 SINE B4 126 290 -2 6 678 917 115 0 0 chr15 12230839 12230969 -91264005 + B3 SINE B2 1 130 -86 6 678 23 33 0 0 chr15 12230981 12231011 -91263963 + AT_rich Low_complexity Low_complexity 1 30 0 6 678 1253 199 44 137 chr15 12231034 12231050 -91263924 - ORR1D1 LTR MaLR 0 374 364 6 678 3338 28 5 18 chr15 12231050 12231451 -91263523 - MTA_Mm LTR MaLR 0 396 1 6 678 1253 199 44 137 chr15 12231451 12231823 -91263151 - ORR1D1 LTR MaLR -11 363 23 6 678 228 35 0 0 chr15 12231823 12231852 -91263122 + (G)n Simple_repeat Simple_repeat 1 29 0 6 678 1253 199 44 137 chr15 12231852 12231870 -91263104 - ORR1D1 LTR MaLR -352 22 5 6 678 540 297 157 12 chr15 12232127 12232369 -91262605 + B4A SINE B4 2 278 -14 6 678 707 159 7 0 chr15 12232418 12232569 -91262405 + (CA)n Simple_repeat Simple_repeat 2 153 0 6 678 243 197 95 32 chr15 12233143 12233204 -91261770 + RSINE1 SINE B4 81 145 -20 6 678 752 177 28 22 chr15 12233204 12233383 -91261591 - RMER10A LTR ERVL 0 442 263 6 678 273 143 0 0 chr15 12233382 12233424 -91261550 - RMER10A LTR ERVL -400 42 1 6 678 243 0 0 0 chr15 12233587 12233614 -91261360 + (TTTTA)n Simple_repeat Simple_repeat 5 31 0 6 678 635 296 30 0 chr15 12233615 12233784 -91261190 - B3 SINE B2 -42 174 1 6 678 367 114 0 41 chr15 12233895 12233968 -91261006 + CT-rich Low_complexity Low_complexity 4 73 0 6 678 244 145 125 31 chr15 12234038 12234102 -91260872 - B4A SINE B4 -20 272 203 6 678 297 186 17 0 chr15 12234116 12234175 -91260799 - HY1 scRNA scRNA -51 61 2 6 678 498 240 49 38 chr15 12234330 12234509 -91260465 - B4 SINE B4 -48 244 45 6 678 280 274 23 86 chr15 12234917 12235045 -91259929 + B1F SINE Alu 1 120 -29 6 678 410 223 0 72 chr15 12234942 12235053 -91259921 + ID_B1 SINE B4 104 206 -18 6 678 569 137 88 0 chr15 12235185 12235287 -91259687 - B1_Mus2 SINE Alu -1 146 36 6 678 261 303 101 53 chr15 12235189 12235398 -91259576 - ID_B1 SINE B4 -5 219 1 6 678 401 353 85 0 chr15 12235607 12235831 -91259143 - MLT1G1 LTR MaLR -256 323 81 6 678 268 200 15 0 chr15 12236026 12236091 -91258883 + MER2 DNA MER2_type 118 183 -162 6 678 376 301 48 14 chr15 12236104 12236249 -91258725 + RSINE1 SINE B4 2 151 -14 6 678 232 246 0 0 chr15 12236250 12236307 -91258667 + GA-rich Low_complexity Low_complexity 2 58 0 6 678 234 0 0 0 chr15 12236312 12236338 -91258636 + (CAGA)n Simple_repeat Simple_repeat 2 27 0 6 678 375 261 139 48 chr15 12236667 12236876 -91258098 + L1MB8 LINE L1 5941 6168 -10 6 678 294 287 32 0 chr15 12237462 12237556 -91257418 - MTE2b LTR MaLR -282 97 1 6 678 2788 232 21 23 chr15 12237818 12238430 -91256544 - Lx6 LINE L1 -35 7425 6815 6 678 581 212 68 19 chr15 12238647 12238838 -91256136 + B3 SINE B2 1 189 -6 6 678 216 0 0 0 chr15 12238841 12238865 -91256109 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6 678 2116 138 0 0 chr15 12238865 12239199 -91255775 + MTC LTR MaLR 88 421 0 6 678 406 250 47 40 chr15 12239338 12239488 -91255486 - RSINE1 SINE B4 -12 153 3 6 678 1501 62 0 30 chr15 12239552 12239753 -91255221 - B2_Mm2 SINE B2 0 195 1 6 678 574 183 58 0 chr15 12239805 12239909 -91255065 + B1_Mur4 SINE Alu 1 110 -40 6 678 1102 41 14 7 chr15 12239909 12240057 -91254917 + (GAAAA)n Simple_repeat Simple_repeat 3 151 0 6 678 256 353 0 47 chr15 12240355 12240462 -91254512 + MLT1H1 LTR MaLR 50 151 -404 6 678 1189 65 0 29 chr15 12240736 12240911 -91254063 + B2_Mm2 SINE B2 2 171 -24 6 678 931 142 44 86 chr15 12240985 12241372 -91253602 - RMER10A LTR ERVL -13 429 1 6 678 273 301 115 0 chr15 12241469 12241582 -91253392 + MLT1F2 LTR MaLR 1 126 -434 6 678 358 276 0 93 chr15 12241574 12241682 -91253292 + PB1D10 SINE Alu 5 102 -15 6 678 1044 101 44 17 chr15 12242035 12242216 -91252758 + B2_Mm2 SINE B2 2 187 -8 6 678 1337 41 0 6 chr15 12242225 12242395 -91252579 + L1_Mus1 LINE L1 6399 6567 0 6 678 198 0 0 0 chr15 12242408 12242430 -91252544 + (A)n Simple_repeat Simple_repeat 1 22 0 6 678 510 17 0 0 chr15 12242710 12242769 -91252205 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 6 678 1092 60 67 67 chr15 12242770 12242949 -91252025 - B2_Mm2 SINE B2 -16 179 1 6 678 180 97 0 0 chr15 12243006 12243037 -91251937 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 678 370 331 8 8 chr15 12243040 12243162 -91251812 + B1F SINE Alu 10 131 -18 6 678 240 35 0 0 chr15 12243835 12243864 -91251110 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 6 678 733 184 44 0 chr15 12243866 12244002 -91250972 - B1_Mur4 SINE Alu -7 143 2 6 678 1389 83 0 6 chr15 12244021 12244202 -91250772 - B2_Mm2 SINE B2 -14 181 2 6 678 948 151 0 20 chr15 12244354 12244503 -91250471 + B1_Mur3 SINE Alu 1 146 -3 6 678 467 279 25 0 chr15 12244507 12244629 -91250345 - RSINE1 SINE B4 -36 129 5 6 678 614 215 16 16 chr15 12244639 12244762 -91250212 - Lx8 LINE L1 -551 6922 6800 6 678 989 280 83 17 chr15 12245086 12245446 -91249528 + Lx8 LINE L1 7072 7455 -18 6 678 1313 275 90 8 chr15 12245829 12246327 -91248647 - L1MB7 LINE L1 -204 5980 5442 6 678 198 0 0 0 chr15 12246329 12246351 -91248623 + (TC)n Simple_repeat Simple_repeat 2 23 0 6 678 1328 84 11 0 chr15 12246351 12246529 -91248445 - B2_Mm1t SINE B2 -13 180 1 6 678 590 211 50 91 chr15 12246595 12246793 -91248181 + B2_Mm2 SINE B2 2 191 -4 6 678 416 205 25 59 chr15 12247333 12247349 -91247625 + B1F SINE Alu 1 16 -133 6 678 3378 43 2 2 chr15 12247349 12247745 -91247229 - MTA_Mm LTR MaLR 0 396 1 6 678 416 205 25 59 chr15 12247745 12247847 -91247127 + B1F SINE Alu 17 115 -34 6 678 184 175 0 24 chr15 12248043 12248084 -91246890 + L2a LINE L2 3369 3408 -18 6 678 3185 192 15 56 chr15 12248118 12248848 -91246126 - RMER1B Other Other 0 1066 367 6 678 212 235 0 14 chr15 12248876 12248945 -91246029 + CT-rich Low_complexity Low_complexity 2 69 0 6 678 201 129 0 0 chr15 12249309 12249340 -91245634 + (TGGGGG)n Simple_repeat Simple_repeat 4 34 0 6 678 213 222 63 0 chr15 12249417 12249480 -91245494 + B1_Mur4 SINE Alu 1 67 -83 6 678 527 0 0 16 chr15 12249563 12249627 -91245347 + (TCTA)n Simple_repeat Simple_repeat 1 63 0 6 678 344 315 91 0 chr15 12249714 12249857 -91245117 - B4A SINE B4 -135 157 2 6 678 189 0 0 0 chr15 12250261 12250282 -91244692 + (T)n Simple_repeat Simple_repeat 1 21 0 6 678 216 299 8 17 chr15 12251123 12251242 -91243732 + (CCG)n Simple_repeat Simple_repeat 3 120 0 6 678 25 0 0 0 chr15 12251713 12251738 -91243236 + GC_rich Low_complexity Low_complexity 1 25 0 6 678 180 0 0 0 chr15 12253443 12253463 -91241511 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 6 678 198 0 0 0 chr15 12253705 12253727 -91241247 + (T)n Simple_repeat Simple_repeat 1 22 0 6 678 653 249 95 26 chr15 12253807 12253997 -91240977 + ID_B1 SINE B4 1 203 -21 6 678 642 238 140 81 chr15 12254043 12254437 -91240537 + RMER10A LTR ERVL 1 417 -25 6 678 22 0 0 0 chr15 12254461 12254483 -91240491 + AT_rich Low_complexity Low_complexity 1 22 0 6 678 949 109 77 0 chr15 12254529 12254685 -91240289 + B2_Mm2 SINE B2 2 169 -26 6 678 198 0 0 0 chr15 12254688 12254710 -91240264 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 6 678 333 0 0 0 chr15 12254710 12254747 -91240227 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 678 22 0 0 0 chr15 12255035 12255057 -91239917 + AT_rich Low_complexity Low_complexity 1 22 0 6 678 1145 191 28 19 chr15 12255205 12255419 -91239555 - B3 SINE B2 0 216 1 6 678 223 316 92 0 chr15 12255473 12255549 -91239425 + B4A SINE B4 22 104 -188 6 678 445 261 43 21 chr15 12255562 12255703 -91239271 + B4 SINE B4 149 292 0 6 678 210 143 0 0 chr15 12255921 12255956 -91239018 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 6 678 716 162 29 22 chr15 12255956 12256095 -91238879 - B1_Mur4 SINE Alu -7 143 4 6 678 260 217 50 71 chr15 12256114 12256213 -91238761 - PB1D10 SINE Alu 0 117 21 6 678 180 0 0 0 chr15 12256423 12256443 -91238531 + (T)n Simple_repeat Simple_repeat 1 20 0 6 678 281 318 56 94 chr15 12257256 12257489 -91237485 + B4A SINE B4 49 272 -20 6 678 411 21 0 0 chr15 12257497 12257545 -91237429 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 678 247 211 53 66 chr15 12257756 12257832 -91237142 - ID4_ SINE ID -2 81 7 6 678 325 206 122 47 chr15 12258329 12258436 -91236538 + PB1 SINE Alu 5 119 -8 6 678 662 265 48 34 chr15 12258763 12258970 -91236004 - B3 SINE B2 -6 210 1 6 678 1428 34 80 0 chr15 12259184 12259200 -91235774 - B2_Mm1a SINE B2 -2 191 176 6 678 207 0 0 0 chr15 12259200 12259223 -91235751 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 6 678 1428 34 80 0 chr15 12259223 12259381 -91235593 - B2_Mm1a SINE B2 -18 175 4 6 678 1570 195 118 16 chr15 12259531 12259911 -91235063 - MTD LTR MaLR 0 419 1 6 678 1096 36 65 0 chr15 12260081 12260219 -91234755 + B1_Mm SINE Alu 1 147 0 6 678 279 0 0 0 chr15 12260224 12260255 -91234719 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 6 678 301 247 15 0 chr15 12260310 12260386 -91234588 - ID4 SINE ID -60 92 16 6 678 468 0 0 0 chr15 12260502 12260554 -91234420 + (TC)n Simple_repeat Simple_repeat 2 53 0 6 678 261 145 0 0 chr15 12260554 12260616 -91234358 + (TG)n Simple_repeat Simple_repeat 2 63 0 6 678 337 289 81 7 chr15 12261107 12261243 -91233731 - RSINE1 SINE B4 0 165 20 6 678 352 250 34 87 chr15 12261243 12261392 -91233582 - ID_B1 SINE B4 -3 221 81 6 678 689 173 35 6 chr15 12261466 12261640 -91233334 + Lx9 LINE L1 7459 7637 -7 7 678 330 282 32 16 chr15 12261717 12261843 -91233131 - B4A SINE B4 -164 128 1 7 678 336 279 25 0 chr15 12261898 12261977 -91232997 - ID4_ SINE ID -2 81 1 7 678 363 222 0 0 chr15 12261985 12262057 -91232917 - PB1 SINE Alu -19 108 37 7 678 1248 99 22 16 chr15 12262589 12262747 -91232227 + B2_Mm2 SINE B2 2 159 -36 7 678 219 36 0 0 chr15 12262747 12262775 -91232199 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 7 678 1248 99 22 16 chr15 12262775 12262801 -91232173 + B2_Mm2 SINE B2 160 187 -8 7 678 647 264 98 0 chr15 12262940 12263103 -91231871 + B3A SINE B2 1 179 -19 7 678 628 164 56 32 chr15 12263811 12263937 -91231037 - B1_Mus1 SINE Alu -19 129 1 7 678 449 288 65 0 chr15 12264525 12264664 -91230310 - B1_Mur1 SINE Alu 0 149 2 7 678 238 231 39 117 chr15 12264679 12264782 -91230192 - B3A SINE B2 -16 182 88 7 678 22 0 0 0 chr15 12264889 12264911 -91230063 + AT_rich Low_complexity Low_complexity 1 22 0 7 678 501 168 76 0 chr15 12265091 12265198 -91229776 - B1_Mur1 SINE Alu -20 129 15 7 678 766 151 83 119 chr15 12265220 12265438 -91229536 + B3 SINE B2 4 213 -3 7 678 22 35 0 0 chr15 12265499 12265528 -91229446 + AT_rich Low_complexity Low_complexity 1 29 0 7 678 801 18 9 17 chr15 12266019 12266134 -91228840 - L1Md_T LINE L1 0 6582 6469 7 678 1423 75 37 0 chr15 12267094 12267282 -91227692 - B2_Mm2 SINE B2 0 195 1 7 678 248 49 49 0 chr15 12267970 12268011 -91226963 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 7 678 1248 73 16 63 chr15 12268017 12268206 -91226768 - B2_Mm2 SINE B2 -14 181 2 7 678 477 186 104 30 chr15 12268349 12268476 -91226498 - B1_Mur4 SINE Alu -2 148 17 7 678 300 192 0 0 chr15 12268557 12268609 -91226365 + B3 SINE B2 50 101 -115 7 678 270 0 0 0 chr15 12268615 12268645 -91226329 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 678 189 0 0 0 chr15 12268645 12268665 -91226309 + (TC)n Simple_repeat Simple_repeat 1 21 0 7 678 28 0 0 0 chr15 12268691 12268719 -91226255 + AT_rich Low_complexity Low_complexity 1 28 0 7 678 21 0 0 0 chr15 12268880 12268901 -91226073 + AT_rich Low_complexity Low_complexity 1 21 0 7 678 765 235 66 5 chr15 12268906 12269103 -91225871 - B3 SINE B2 -6 210 2 7 678 311 288 71 8 chr15 12270074 12270200 -91224774 - B1F2 SINE Alu -2 147 14 7 678 631 232 21 7 chr15 12270558 12270701 -91224273 - B1_Mur1 SINE Alu -4 145 1 7 678 660 274 211 9 chr15 12271240 12271572 -91223402 + Lx8 LINE L1 7073 7471 -2 7 678 314 253 38 0 chr15 12272028 12272107 -91222867 - B3 SINE B2 -127 89 8 7 678 740 151 95 0 chr15 12272332 12272458 -91222516 - B1_Mus2 SINE Alu -9 138 1 7 678 351 0 0 0 chr15 12272475 12272514 -91222460 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 7 678 479 196 111 9 chr15 12273085 12273193 -91221781 - PB1D9 SINE Alu -1 119 1 7 678 1461 63 10 16 chr15 12273511 12273705 -91221269 - B2_Mm2 SINE B2 -1 194 2 7 678 259 146 0 77 chr15 12274187 12274239 -91220735 - RSINE1 SINE B4 -46 119 72 7 678 219 254 34 0 chr15 12274714 12274773 -91220201 + RSINE1 SINE B4 3 63 -102 7 678 508 274 55 61 chr15 12275653 12275816 -91219158 + RSINE1 SINE B4 4 165 0 7 678 4810 98 102 5 chr15 12276432 12277174 -91217800 - Lx2 LINE L1 0 6997 6184 7 678 702 235 21 48 chr15 12277555 12277743 -91217231 - B3A SINE B2 0 198 16 7 678 250 235 161 0 chr15 12277898 12277979 -91216995 + MER3 DNA MER1_type 92 185 -24 7 678 518 157 93 43 chr15 12278340 12278480 -91216494 + B1_Mus1 SINE Alu 2 148 0 7 678 323 23 0 22 chr15 12278648 12278693 -91216281 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 7 678 404 277 83 15 chr15 12281112 12281244 -91213730 - MER58A DNA MER1_type 0 224 84 7 678 560 211 206 28 chr15 12281350 12281530 -91213444 - B3 SINE B2 -4 212 1 7 678 454 191 22 14 chr15 12281539 12281677 -91213297 + CT-rich Low_complexity Low_complexity 3 141 0 7 678 850 157 14 7 chr15 12281679 12281827 -91213147 - B1_Mur4 SINE Alu -1 149 1 7 678 639 197 41 0 chr15 12282121 12282243 -91212731 - B1_Mur2 SINE Alu -21 128 2 7 678 754 153 32 39 chr15 12282894 12283081 -91211893 - B3 SINE B2 0 195 10 7 678 277 290 67 67 chr15 12283568 12283867 -91211107 - L1MC5 LINE L1 -437 7524 7226 7 678 612 264 95 19 chr15 12284255 12284413 -91210561 + B3A SINE B2 1 170 -28 7 678 829 58 207 0 chr15 12284602 12284723 -91210251 + B1_Mm SINE Alu 2 147 0 7 678 32 0 0 0 chr15 12284726 12284758 -91210216 + AT_rich Low_complexity Low_complexity 1 32 0 7 678 863 204 193 0 chr15 12284762 12284943 -91210031 + B3 SINE B2 1 216 0 7 678 207 0 0 0 chr15 12284992 12285015 -91209959 + (GA)n Simple_repeat Simple_repeat 1 23 0 7 678 269 298 74 11 chr15 12285017 12285112 -91209862 - RSINE1 SINE B4 -52 113 13 7 678 277 282 47 0 chr15 12285172 12285257 -91209717 - L1MC5 LINE L1 -1145 6816 6728 7 678 260 207 171 0 chr15 12285354 12285436 -91209538 + L1MB3 LINE L1 6031 6126 -57 7 678 665 166 189 46 chr15 12285894 12286090 -91208884 - URR1B DNA MER1_type -1 224 1 7 678 215 31 31 0 chr15 12286716 12286748 -91208226 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 7 678 1189 29 0 0 chr15 12286748 12286885 -91208089 - B1_Mus1 SINE Alu -8 140 4 7 678 427 303 0 52 chr15 12287152 12287267 -91207707 - PB1D10 SINE Alu -8 109 1 7 678 293 191 174 54 chr15 12287579 12287689 -91207285 - PB1D9 SINE Alu -18 131 21 7 678 496 223 94 15 chr15 12288709 12288885 -91206089 - B3 SINE B2 -8 185 1 7 678 23 33 0 0 chr15 12289482 12289512 -91205462 + AT_rich Low_complexity Low_complexity 1 30 0 7 678 576 279 38 70 chr15 12293138 12293323 -91201651 + B3A SINE B2 4 182 -16 7 678 553 200 60 60 chr15 12293629 12293778 -91201196 - B1F2 SINE Alu 0 149 1 7 678 392 181 0 14 chr15 12294192 12294265 -91200709 + PB1D9 SINE Alu 41 112 -8 7 678 218 32 32 0 chr15 12294267 12294298 -91200676 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 678 350 169 461 0 chr15 12294375 12294464 -91200510 + B3 SINE B2 1 130 -86 7 678 1557 14 0 0 chr15 12294633 12294846 -91200128 + (TGG)n Simple_repeat Simple_repeat 1 213 0 7 678 1470 78 5 5 chr15 12296526 12296718 -91198256 + B2_Mm1a SINE B2 1 192 -1 7 678 1248 48 0 0 chr15 12296718 12296864 -91198110 + B1_Mus2 SINE Alu 1 147 0 7 678 1176 32 153 6 chr15 12298651 12298808 -91196166 - B2_Mm2 SINE B2 -14 181 2 7 678 827 217 8 181 chr15 12299018 12299266 -91195708 - ID_B1 SINE B4 -8 216 12 7 678 198 0 0 0 chr15 12301497 12301519 -91193455 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 7 678 487 280 50 41 chr15 12301924 12302166 -91192808 + L1MD3 LINE L1 7732 7975 -20 7 678 216 0 0 0 chr15 12306609 12306633 -91188341 + (T)n Simple_repeat Simple_repeat 1 24 0 7 678 237 296 0 66 chr15 12307094 12307112 -91187862 - B1F SINE Alu -7 142 126 7 678 1337 99 0 25 chr15 12307112 12307309 -91187665 + B2_Mm2 SINE B2 1 192 -3 7 678 292 236 0 0 chr15 12307311 12307366 -91187608 - ID_B1 SINE B4 -20 204 150 7 678 264 298 64 55 chr15 12307409 12307519 -91187455 - PB1D10 SINE Alu -9 111 1 7 678 271 300 107 37 chr15 12307599 12307786 -91187188 - MIRb SINE MIR -42 226 27 7 678 479 211 9 35 chr15 12308048 12308161 -91186813 - RSINE1 SINE B4 -3 162 53 7 678 302 331 13 107 chr15 12308253 12308307 -91186667 - ID_B1 SINE B4 0 224 173 7 678 252 0 0 0 chr15 12308307 12308335 -91186639 + (TC)n Simple_repeat Simple_repeat 2 29 0 7 678 402 74 0 0 chr15 12308335 12308388 -91186586 + (TA)n Simple_repeat Simple_repeat 1 54 0 7 678 302 331 13 107 chr15 12308388 12308434 -91186540 - ID_B1 SINE B4 -52 172 132 7 678 1390 55 55 0 chr15 12308434 12308615 -91186359 - B2_Mm1a SINE B2 -1 192 2 7 678 302 331 13 107 chr15 12308615 12308661 -91186313 - ID_B1 SINE B4 -93 131 91 7 678 284 224 149 0 chr15 12308672 12308739 -91186235 - ID4 SINE ID -6 77 1 7 678 234 62 0 0 chr15 12309174 12309206 -91185768 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 678 1368 83 0 59 chr15 12309815 12310019 -91184955 - B2_Mm2 SINE B2 -2 193 2 7 678 945 175 18 18 chr15 12310035 12310198 -91184776 - RSINE1 SINE B4 0 165 3 7 678 371 310 35 17 chr15 12311325 12311440 -91183534 + PB1D10 SINE Alu 1 117 0 7 678 272 284 230 7 chr15 12311516 12311651 -91183323 + RSINE1 SINE B4 1 165 0 7 678 280 304 12 0 chr15 12311667 12311828 -91183146 + (CA)n Simple_repeat Simple_repeat 2 164 0 7 678 214 95 0 45 chr15 12312151 12312195 -91182779 + (GGGTG)n Simple_repeat Simple_repeat 1 42 0 7 678 239 212 30 15 chr15 12313201 12313268 -91181706 + L1MB5 LINE L1 6104 6171 -3 7 678 461 237 153 79 chr15 12313275 12313504 -91181470 + B4A SINE B4 3 248 -44 7 678 507 56 0 0 chr15 12313574 12313645 -91181329 + (CA)n Simple_repeat Simple_repeat 1 71 0 7 678 301 275 12 12 chr15 12313652 12313733 -91181241 + HAL1-2a_MD LINE L1 2345 2425 -599 7 678 950 121 14 0 chr15 12313952 12314092 -91180882 + B1_Mus1 SINE Alu 2 143 -5 7 678 559 244 81 7 chr15 12314241 12314377 -91180597 - B1F SINE Alu 0 149 4 7 678 276 77 0 0 chr15 12314796 12314835 -91180139 + (C)n Simple_repeat Simple_repeat 1 39 0 7 678 439 289 169 33 chr15 12316102 12316345 -91178629 - B4A SINE B4 -16 276 1 8 678 505 201 164 8 chr15 12317706 12317850 -91177124 - B3 SINE B2 -19 176 9 8 678 219 167 0 0 chr15 12318478 12318520 -91176454 + CT-rich Low_complexity Low_complexity 1 42 0 8 678 596 241 27 47 chr15 12320034 12320182 -91174792 + RSINE1 SINE B4 4 148 -17 8 678 387 0 0 0 chr15 12320184 12320227 -91174747 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 678 714 191 50 0 chr15 12320258 12320399 -91174575 + B1_Mus1 SINE Alu 1 148 0 8 678 30 27 0 0 chr15 12320414 12320451 -91174523 + AT_rich Low_complexity Low_complexity 1 37 0 8 678 21 0 0 0 chr15 12320702 12320723 -91174251 + AT_rich Low_complexity Low_complexity 1 21 0 8 84 8216 65 3 3 chr15 12320726 12322478 -91172496 - L1_Mus1 LINE L1 0 6567 4819 8 679 733 265 29 43 chr15 12322497 12322706 -91172268 - B3 SINE B2 -6 210 5 8 679 251 349 55 9 chr15 12322960 12323070 -91171904 + Charlie10a DNA MER1_type 2 116 -164 8 679 622 175 10 0 chr15 12323253 12323356 -91171618 - B1_Mur2 SINE Alu -13 136 33 8 679 235 248 134 62 chr15 12323288 12323400 -91171574 - MT2B LTR ERVL -348 253 134 8 679 688 238 149 28 chr15 12323892 12324147 -91170827 - B4A SINE B4 -6 286 1 8 679 21 36 0 0 chr15 12324291 12324319 -91170655 + AT_rich Low_complexity Low_complexity 1 28 0 8 679 961 66 0 0 chr15 12325644 12325766 -91169208 + B1_Mus1 SINE Alu 27 148 0 8 679 414 0 0 0 chr15 12326766 12326812 -91168162 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 679 216 0 0 0 chr15 12327376 12327400 -91167574 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 679 1169 41 7 33 chr15 12327573 12327724 -91167250 - B1_Mus1 SINE Alu -1 147 1 8 679 274 286 0 16 chr15 12327764 12327828 -91167146 - tRNA-Ala-GCY_ tRNA tRNA -7 68 6 8 679 982 224 14 24 chr15 12327868 12328078 -91166896 - B3 SINE B2 -2 214 7 8 679 638 315 91 58 chr15 12328267 12328543 -91166431 - B4A SINE B4 0 292 8 8 679 207 306 0 0 chr15 12329313 12329362 -91165612 - MIRb SINE MIR -6 262 214 8 679 802 297 73 84 chr15 12330449 12330820 -91164154 - MTE2a LTR MaLR 0 379 13 8 679 392 315 65 0 chr15 12330962 12331044 -91163930 + ID_B1 SINE B4 86 167 -57 8 679 279 0 0 0 chr15 12331044 12331075 -91163899 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 679 392 315 65 0 chr15 12331075 12331100 -91163874 + ID_B1 SINE B4 168 199 -25 8 679 390 21 0 0 chr15 12331948 12331995 -91162979 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 679 388 256 105 16 chr15 12332706 12332834 -91162140 + B1F1 SINE Alu 2 128 -21 8 679 187 234 22 135 chr15 12333222 12333311 -91161663 - MER5B DNA MER1_type -38 140 62 8 679 674 288 19 0 chr15 12334469 12334629 -91160345 + RSINE1 SINE B4 3 165 0 8 679 267 252 0 154 chr15 12334849 12334985 -91159989 + MT2B LTR ERVL 150 264 -337 8 679 587 230 0 38 chr15 12334868 12334999 -91159975 + B1_Mur1 SINE Alu 3 128 -21 8 679 215 347 76 45 chr15 12335012 12335169 -91159805 + MIRc SINE MIR 102 263 -5 8 679 2421 156 197 10 chr15 12335439 12335932 -91159042 - RMER4B LTR ERVK 0 585 1 8 679 347 284 42 81 chr15 12335957 12336123 -91158851 - MIRb SINE MIR -45 223 60 8 679 204 413 0 0 chr15 12339203 12339278 -91155696 + MIRc SINE MIR 81 155 -113 8 679 3208 44 29 0 chr15 12339468 12339853 -91155121 - MTA_Mm LTR MaLR 0 396 1 8 679 225 0 0 0 chr15 12341308 12341333 -91153641 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 8 679 278 221 29 123 chr15 12341345 12341459 -91153515 - PB1D10 SINE Alu -10 110 1 8 679 404 263 93 21 chr15 12341553 12341747 -91153227 - L1ME3A LINE L1 -104 6069 5862 8 679 548 268 38 13 chr15 12341757 12341916 -91153058 - RSINE1 SINE B4 0 165 3 8 679 1501 64 5 0 chr15 12342020 12342208 -91152766 + B2_Mm1a SINE B2 1 189 -4 8 679 377 318 130 48 chr15 12342460 12342668 -91152306 - L1MD LINE L1 -772 5374 5150 8 679 1042 219 117 120 chr15 12342775 12343133 -91151841 - MTE2a LTR MaLR -19 360 4 8 679 318 292 11 0 chr15 12343292 12343381 -91151593 + (TG)n Simple_repeat Simple_repeat 1 90 0 8 679 471 271 33 76 chr15 12343606 12343798 -91151176 - B3A SINE B2 -7 209 20 8 679 1201 48 0 14 chr15 12343835 12343983 -91150991 - B1_Mus1 SINE Alu -1 147 2 8 679 470 295 75 14 chr15 12344751 12344910 -91150064 + B3A SINE B2 2 158 -37 8 679 23 0 0 0 chr15 12344910 12344933 -91150041 + AT_rich Low_complexity Low_complexity 1 23 0 8 679 1087 58 110 7 chr15 12344933 12345088 -91149886 + B2_Mm2 SINE B2 2 172 -23 8 679 629 150 88 9 chr15 12345116 12345230 -91149744 + B1_Mus1 SINE Alu 20 142 -6 8 679 255 344 117 0 chr15 12346097 12346251 -91148723 - MIRb SINE MIR -103 173 2 8 679 199 304 198 9 chr15 12346465 12346581 -91148393 + MIR3 SINE MIR 39 176 -32 8 679 263 238 15 45 chr15 12347087 12347153 -91147821 + RSINE1 SINE B4 2 65 -100 8 679 249 262 35 59 chr15 12347478 12347563 -91147411 + ORSL DNA Tip100 1 83 -192 8 679 752 84 285 14 chr15 12347566 12347710 -91147264 - B2_Mm1t SINE B2 -9 184 2 8 679 784 261 122 23 chr15 12348036 12348299 -91146675 - B4A SINE B4 -3 289 1 8 679 229 258 0 126 chr15 12348310 12348351 -91146623 + ORSL DNA Tip100 168 200 -75 8 679 1275 41 0 0 chr15 12348351 12348498 -91146476 - B1_Mus1 SINE Alu 0 148 2 8 679 229 258 0 126 chr15 12348498 12348567 -91146407 + ORSL DNA Tip100 201 264 -11 8 679 275 245 47 75 chr15 12348965 12349071 -91145903 + B1F SINE Alu 14 116 -33 8 679 257 185 46 0 chr15 12349889 12349954 -91145020 + B1_Mus1 SINE Alu 1 68 -80 8 679 549 293 40 112 chr15 12350482 12350707 -91144267 + B4A SINE B4 5 230 -62 8 679 560 247 80 32 chr15 12350707 12350895 -91144079 + B3A SINE B2 2 198 0 8 679 549 293 40 112 chr15 12350895 12350973 -91144001 + B4A SINE B4 231 286 -6 8 679 1364 90 16 11 chr15 12351929 12352119 -91142855 + B2_Mm2 SINE B2 2 192 -3 8 679 21 0 0 0 chr15 12352146 12352167 -91142807 + AT_rich Low_complexity Low_complexity 1 21 0 8 679 2214 98 69 0 chr15 12352753 12353059 -91141915 + ORR1A2 LTR MaLR 1 327 0 8 679 501 255 0 0 chr15 12353762 12353856 -91141118 + ID_B1 SINE B4 84 177 -47 8 679 180 0 0 0 chr15 12354553 12354573 -91140401 + (A)n Simple_repeat Simple_repeat 1 20 0 8 679 2602 169 6 30 chr15 12355840 12356005 -91138969 - RMER6B LTR ERVK -2 459 295 8 679 207 0 0 0 chr15 12356005 12356028 -91138946 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 8 679 2602 169 6 30 chr15 12356028 12356331 -91138643 - RMER6B LTR ERVK -167 294 3 8 679 590 217 0 4 chr15 12358020 12358264 -91136710 + (CA)n Simple_repeat Simple_repeat 1 242 0 8 679 383 294 105 0 chr15 12359989 12360132 -91134842 + MER58A DNA MER1_type 66 223 -1 8 679 320 133 17 0 chr15 12360774 12360834 -91134140 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 8 679 847 158 65 0 chr15 12361293 12361432 -91133542 + B1_Mur2 SINE Alu 2 149 0 8 679 351 150 0 0 chr15 12361887 12361947 -91133027 + (GGGA)n Simple_repeat Simple_repeat 1 60 0 8 679 442 259 40 34 chr15 12362570 12362718 -91132256 - RSINE1 SINE B4 -14 151 3 8 679 315 0 0 0 chr15 12363396 12363431 -91131543 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 679 474 154 283 26 chr15 12363475 12363588 -91131386 + B1_Mur1 SINE Alu 2 143 -6 8 679 706 89 20 10 chr15 12365201 12365303 -91129671 + MusHAL1 LINE L1 2371 2473 -239 8 679 665 152 152 0 chr15 12365337 12365462 -91129512 - ID_B1 SINE B4 -8 216 73 8 679 217 362 63 34 chr15 12367933 12368139 -91126835 - MIRb SINE MIR -37 231 20 8 679 308 24 24 0 chr15 12368187 12368228 -91126746 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 679 551 256 101 0 chr15 12368306 12368435 -91126539 + B1_Mur1 SINE Alu 1 142 -7 8 679 1009 228 115 36 chr15 12368441 12368786 -91126188 - MTD LTR MaLR -31 388 1 8 679 216 0 0 0 chr15 12370308 12370332 -91124642 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 679 685 131 19 0 chr15 12370332 12370439 -91124535 - PB1D9 SINE Alu -10 110 2 8 679 396 161 10 121 chr15 12370357 12370456 -91124518 - MT2B LTR ERVL -361 240 153 8 679 528 286 84 66 chr15 12370565 12370778 -91124196 - MER2 DNA MER2_type -128 217 1 8 679 263 362 79 43 chr15 12371666 12371969 -91123005 + ORR1D1 LTR MaLR 53 366 -8 8 679 246 291 92 11 chr15 12373075 12373162 -91121812 - MamGypLTR1a LTR Gypsy -57 725 632 8 679 521 359 45 71 chr15 12373324 12373681 -91121293 - MamGypLTR1a LTR Gypsy -404 380 42 8 679 265 325 101 6 chr15 12374284 12374442 -91120532 - L3 LINE CR1 -341 4148 3976 8 679 217 217 0 21 chr15 12375218 12375265 -91119709 + G-rich Low_complexity Low_complexity 2 47 0 8 679 453 278 76 7 chr15 12375585 12375730 -91119244 + MER3 DNA MER1_type 1 155 -54 8 679 643 241 122 12 chr15 12376548 12376712 -91118262 - B3A SINE B2 -16 182 1 8 679 21 0 0 0 chr15 12376761 12376782 -91118192 + AT_rich Low_complexity Low_complexity 1 21 0 8 679 225 0 0 0 chr15 12378114 12378139 -91116835 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 8 679 241 267 112 104 chr15 12378146 12378280 -91116694 + B1F2 SINE Alu 6 140 -9 8 679 486 0 0 0 chr15 12378355 12378409 -91116565 + (CA)n Simple_repeat Simple_repeat 2 55 0 8 679 341 93 19 0 chr15 12378527 12378581 -91116393 + (TG)n Simple_repeat Simple_repeat 2 56 0 8 679 375 288 64 0 chr15 12378695 12378820 -91116154 - B4A SINE B4 -159 133 1 8 679 553 61 0 0 chr15 12379003 12379085 -91115889 - L1Md_F2 LINE L1 0 6582 6501 8 679 253 359 84 22 chr15 12379339 12379564 -91115410 + L2 LINE L2 2619 2857 -562 9 679 201 39 0 0 chr15 12379769 12379795 -91115179 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 9 679 2478 92 50 24 chr15 12379873 12380252 -91114722 + Lx LINE L1 6259 6647 -7 9 679 900 123 249 12 chr15 12381928 12382101 -91112873 + B3 SINE B2 1 214 -2 9 679 35 88 0 0 chr15 12382781 12382872 -91112102 + AT_rich Low_complexity Low_complexity 1 91 0 9 679 2557 83 6 0 chr15 12383423 12383748 -91111226 + ORR1A2 LTR MaLR 1 327 0 9 679 795 217 15 64 chr15 12384355 12384557 -91110417 + B3A SINE B2 5 196 -2 9 679 410 310 35 0 chr15 12384582 12384724 -91110250 + B1F SINE Alu 2 148 -1 9 679 23 33 0 0 chr15 12385080 12385110 -91109864 + AT_rich Low_complexity Low_complexity 1 30 0 9 679 617 239 15 0 chr15 12385449 12385583 -91109391 + RSINE1 SINE B4 13 148 -17 9 679 884 151 0 0 chr15 12385994 12386133 -91108841 - B1_Mus2 SINE Alu 0 147 9 9 679 365 180 17 152 chr15 12386039 12386157 -91108817 - MT2B LTR ERVL -344 257 156 9 679 719 259 152 16 chr15 12387158 12387401 -91107573 + B4 SINE B4 11 286 -6 9 679 221 128 0 21 chr15 12387407 12387455 -91107519 + (CAGA)n Simple_repeat Simple_repeat 1 47 0 9 679 210 222 0 0 chr15 12387444 12387498 -91107476 + (CA)n Simple_repeat Simple_repeat 1 54 0 9 679 229 321 0 78 chr15 12388307 12388422 -91106552 - BC1_Mm scRNA scRNA -42 110 5 9 679 858 146 260 12 chr15 12388441 12388614 -91106360 + B3 SINE B2 1 216 0 9 679 654 248 49 40 chr15 12388638 12388861 -91106113 + L1MA5 LINE L1 6054 6278 -22 9 679 740 253 49 6 chr15 12389009 12389165 -91105809 + B3 SINE B2 4 167 -49 9 679 285 29 0 0 chr15 12389165 12389199 -91105775 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 679 270 0 0 0 chr15 12389856 12389886 -91105088 + (A)n Simple_repeat Simple_repeat 1 30 0 9 679 315 270 0 0 chr15 12390239 12390302 -91104672 + ID4_ SINE ID 2 64 -19 9 679 300 111 0 0 chr15 12390321 12390366 -91104608 + (CGTG)n Simple_repeat Simple_repeat 3 47 0 9 679 330 26 0 0 chr15 12390890 12390929 -91104045 + (TG)n Simple_repeat Simple_repeat 1 39 0 9 679 494 293 16 16 chr15 12391023 12391148 -91103826 - B4 SINE B4 -2 290 166 9 679 262 290 39 29 chr15 12391302 12391405 -91103569 - MLT1A1 LTR MaLR -1 407 304 9 679 230 159 0 22 chr15 12391867 12391912 -91103062 + C-rich Low_complexity Low_complexity 2 45 0 9 679 21 36 0 0 chr15 12391949 12391977 -91102997 + AT_rich Low_complexity Low_complexity 1 28 0 9 679 507 332 21 77 chr15 12391977 12392174 -91102800 - B3A SINE B2 -9 207 21 9 679 1240 60 77 6 chr15 12392219 12392387 -91102587 - B2_Mm2 SINE B2 -14 181 2 9 679 213 329 14 0 chr15 12392610 12392683 -91102291 - ID4_ SINE ID 0 83 10 9 679 300 299 129 21 chr15 12392684 12392712 -91102262 + B4 SINE B4 52 94 -198 9 679 528 258 58 0 chr15 12392712 12392832 -91102142 + B1F SINE Alu 1 127 -22 9 679 888 44 0 0 chr15 12392837 12392950 -91102024 + (CA)n Simple_repeat Simple_repeat 2 114 0 9 679 263 210 115 69 chr15 12393462 12393549 -91101425 - Tigger7 DNA MER2_type -13 2478 2388 9 679 884 326 140 5 chr15 12393523 12393902 -91101072 - Tigger7 DNA MER2_type -2041 450 21 9 679 308 293 42 33 chr15 12393938 12394058 -91100916 + LTR40b LTR ERVL 331 451 -11 9 679 530 276 97 0 chr15 12397436 12397581 -91097393 + Lx8 LINE L1 7174 7332 -141 9 679 788 170 250 6 chr15 12397590 12397762 -91097212 - B3 SINE B2 -1 215 2 9 679 1086 214 10 0 chr15 12397788 12397980 -91096994 - B3 SINE B2 -6 210 17 9 679 512 290 240 3 chr15 12398318 12398636 -91096338 - L1MA4A LINE L1 -409 5894 5518 9 679 185 288 134 24 chr15 12398887 12398969 -91096005 + MIR SINE MIR 21 111 -151 9 679 300 27 0 0 chr15 12399768 12399805 -91095169 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 679 565 273 14 32 chr15 12400170 12400386 -91094588 + L1MA4 LINE L1 5705 5916 -384 9 679 23 0 0 0 chr15 12400525 12400548 -91094426 + AT_rich Low_complexity Low_complexity 1 23 0 9 679 1249 319 60 28 chr15 12401409 12401905 -91093069 + Tigger7 DNA MER2_type 1 512 -1979 9 679 567 250 0 31 chr15 12402016 12402144 -91092830 - ID_B1 SINE B4 -5 219 96 9 679 280 257 160 9 chr15 12402163 12402269 -91092705 - Charlie21a DNA MER1_type -732 481 360 9 679 570 278 155 19 chr15 12403703 12404026 -91090948 - L1MA9 LINE L1 0 6312 5946 9 679 745 157 66 0 chr15 12404079 12404200 -91090774 - B3 SINE B2 -86 130 2 9 679 504 200 100 33 chr15 12404207 12404357 -91090617 - L1MA9 LINE L1 -368 5923 5764 9 679 696 249 4 98 chr15 12404443 12404679 -91090295 - B3 SINE B2 0 216 3 9 679 339 250 40 0 chr15 12404707 12404783 -91090191 - L1M2 LINE L1 -2816 3327 3249 9 679 691 172 78 8 chr15 12404816 12404945 -91090029 - B1_Mur1 SINE Alu -11 138 1 9 679 595 286 104 76 chr15 12405027 12405306 -91089668 + L1M2 LINE L1 2457 2734 -3409 9 679 1183 62 0 20 chr15 12405306 12405455 -91089519 - B1_Mus2 SINE Alu 0 147 2 9 679 595 287 105 76 chr15 12405455 12405569 -91089405 + L1M2 LINE L1 2735 2861 -3279 9 679 282 29 0 0 chr15 12405569 12405604 -91089370 + (GA)n Simple_repeat Simple_repeat 2 36 0 9 679 561 311 155 66 chr15 12405604 12405846 -91089128 + L1M2 LINE L1 2862 3149 -2991 9 679 1525 34 11 0 chr15 12405867 12406044 -91088930 + B2_Mm2 SINE B2 2 180 -15 9 679 235 233 110 0 chr15 12407418 12407491 -91087483 - L1M5 LINE L1 -1320 4826 4746 9 679 216 0 0 0 chr15 12407886 12407910 -91087064 + (CCCA)n Simple_repeat Simple_repeat 4 27 0 9 679 324 292 23 13 chr15 12408532 12408699 -91086275 + L1MD2 LINE L1 5704 5874 -305 9 679 1066 249 151 13 chr15 12409112 12409417 -91085557 + ORR1D2 LTR MaLR 24 370 0 9 679 341 327 25 68 chr15 12409417 12409553 -91085421 + B4A SINE B4 142 270 -22 9 679 1171 75 0 0 chr15 12409553 12409699 -91085275 + B1_Mus1 SINE Alu 1 146 -2 9 679 207 0 0 0 chr15 12409699 12409722 -91085252 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 679 213 200 0 0 chr15 12409755 12409790 -91085184 + (CA)n Simple_repeat Simple_repeat 1 35 0 9 679 2001 121 52 42 chr15 12410301 12410707 -91084267 + RMER17C LTR ERVK 1 410 0 9 679 1186 163 51 9 chr15 12411337 12411554 -91083420 - URR1A DNA MER1_type 0 226 1 9 679 1839 187 71 16 chr15 12411611 12411992 -91082982 + MTD LTR MaLR 18 419 0 9 679 239 272 75 28 chr15 12412428 12412534 -91082440 + MIRm SINE MIR 83 193 -83 9 679 254 260 0 72 chr15 12412814 12412897 -91082077 + RSINE1 SINE B4 61 137 -28 9 679 225 0 0 0 chr15 12412915 12412940 -91082034 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 9 679 293 255 66 0 chr15 12414042 12414148 -91080826 + MER5A1 DNA MER1_type 22 134 -32 9 679 363 44 0 0 chr15 12414251 12414296 -91080678 + (CA)n Simple_repeat Simple_repeat 2 46 0 9 679 221 196 109 0 chr15 12414297 12414343 -91080631 - B1_Mus2 SINE Alu -57 92 42 9 679 242 245 32 138 chr15 12414343 12414466 -91080508 - Charlie4 DNA MER1_type -1846 115 6 9 679 300 196 99 57 chr15 12414466 12414607 -91080367 + Lx4B LINE L1 6895 7041 -17 9 679 387 0 0 0 chr15 12414608 12414651 -91080323 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 9 679 1682 149 109 55 chr15 12414738 12415086 -91079888 + ORR1B2 LTR MaLR 1 367 0 9 679 216 0 0 0 chr15 12415883 12415907 -91079067 + (CA)n Simple_repeat Simple_repeat 1 24 0 9 679 378 299 96 92 chr15 12415982 12416471 -91078503 + MLT2B5 LTR ERVL 6 515 0 9 679 270 0 0 0 chr15 12416769 12416799 -91078175 + (TG)n Simple_repeat Simple_repeat 1 30 0 9 679 523 297 0 28 chr15 12416803 12416945 -91078029 - B1F SINE Alu -11 138 1 9 679 625 260 0 27 chr15 12417045 12417195 -91077779 + ID_B1 SINE B4 79 224 0 9 679 2182 165 64 10 chr15 12417368 12417760 -91077214 - MTC LTR MaLR -8 413 1 9 679 192 152 0 0 chr15 12417804 12417837 -91077137 + (TA)n Simple_repeat Simple_repeat 2 34 0 9 679 907 85 234 7 chr15 12417948 12418102 -91076872 - B2_Mm1a SINE B2 -3 190 2 9 679 1225 95 6 12 chr15 12418814 12418985 -91075989 + B2_Mm1t SINE B2 2 171 -22 9 679 282 125 414 9 chr15 12419040 12419144 -91075830 + B2_Mm2 SINE B2 50 195 0 9 679 670 213 169 17 chr15 12419192 12419369 -91075605 - URR1B DNA MER1_type 0 225 22 9 679 434 65 0 16 chr15 12419962 12420025 -91074949 + (TA)n Simple_repeat Simple_repeat 2 63 0 9 679 375 229 8 186 chr15 12421554 12421683 -91073291 - MER58B DNA MER1_type -232 109 4 9 679 496 274 67 43 chr15 12423724 12423888 -91071086 + B4A SINE B4 11 178 -114 9 679 234 0 0 0 chr15 12423906 12423932 -91071042 + (CA)n Simple_repeat Simple_repeat 2 27 0 9 679 967 190 112 0 chr15 12424617 12424796 -91070178 + B3 SINE B2 1 199 -17 9 679 437 229 9 60 chr15 12424835 12424951 -91070023 + B1_Mur4 SINE Alu 28 137 -13 9 679 276 53 0 0 chr15 12424951 12424989 -91069985 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 679 438 169 0 0 chr15 12424984 12425102 -91069872 + CT-rich Low_complexity Low_complexity 1 118 0 9 679 254 318 22 22 chr15 12425800 12425890 -91069084 - MIR3 SINE MIR -24 184 95 9 679 1285 201 109 26 chr15 12425923 12426235 -91068739 + Lx9 LINE L1 7133 7470 -174 9 679 353 40 40 0 chr15 12426344 12426394 -91068580 + (CATA)n Simple_repeat Simple_repeat 4 55 0 9 679 295 231 10 71 chr15 12426397 12426448 -91068526 + L1M3 LINE L1 5703 5753 -430 9 679 3582 20 2 0 chr15 12426448 12426843 -91068131 + MTA_Mm LTR MaLR 1 396 0 1 679 295 231 10 71 chr15 12426843 12426889 -91068085 + L1M3 LINE L1 5754 5793 -390 9 679 728 237 73 23 chr15 12428118 12428295 -91066679 + B3 SINE B2 1 186 -30 1 679 333 0 0 0 chr15 12428422 12428459 -91066515 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 679 343 300 0 0 chr15 12428480 12428550 -91066424 - ID4 SINE ID -10 73 4 1 679 698 224 6 75 chr15 12428566 12428725 -91066249 + MER20 DNA MER1_type 34 181 -38 1 679 492 208 0 0 chr15 12429053 12429159 -91065815 + (TA)n Simple_repeat Simple_repeat 1 106 0 1 679 286 282 359 0 chr15 12429162 12429265 -91065709 - RSINE1 SINE B4 -22 143 4 1 679 546 252 6 64 chr15 12429479 12429636 -91065338 - RSINE1 SINE B4 -17 148 1 1 679 318 246 63 35 chr15 12431340 12431483 -91063491 + B1F1 SINE Alu 3 149 0 1 679 555 242 150 36 chr15 12432396 12432563 -91062411 + B3 SINE B2 1 186 -30 1 679 543 251 1 32 chr15 12433406 12433559 -91061415 - B1_Mur4 SINE Alu 0 148 1 1 679 676 224 157 6 chr15 12434366 12434436 -91060538 + ID_B1 SINE B4 2 96 -128 1 679 372 248 131 58 chr15 12434436 12434573 -91060401 + B1F SINE Alu 3 149 0 1 679 472 298 40 29 chr15 12434745 12434918 -91060056 + B4A SINE B4 1 175 -117 1 679 425 246 100 105 chr15 12435160 12435360 -91059614 + RMER30 DNA MER1_type 2 200 -2 1 679 189 0 0 0 chr15 12435884 12435905 -91059069 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1 679 573 55 0 0 chr15 12436902 12436975 -91057999 + (GA)n Simple_repeat Simple_repeat 2 74 0 1 679 1251 116 5 21 chr15 12437699 12437892 -91057082 + B2_Mm2 SINE B2 2 191 -4 1 679 782 146 2 41 chr15 12438125 12438284 -91056690 + ORR1B1 LTR MaLR 1 135 -259 1 679 201 300 0 0 chr15 12438306 12438322 -91056652 + polypurine Low_complexity Low_complexity 2 17 0 1 679 914 129 0 14 chr15 12438322 12438463 -91056511 + B1_Mus2 SINE Alu 3 141 -6 1 679 201 300 0 0 chr15 12438463 12438506 -91056468 + polypurine Low_complexity Low_complexity 18 60 0 1 679 411 277 99 22 chr15 12438846 12439027 -91055947 + MIR SINE MIR 16 210 -52 1 679 485 280 133 91 chr15 12439035 12439327 -91055647 + Kanga2_a DNA Tc2 389 697 -191 1 679 304 248 174 36 chr15 12439327 12439494 -91055480 - B3A SINE B2 -8 190 1 1 679 485 280 133 91 chr15 12439494 12439563 -91055411 + Kanga2_a DNA Tc2 698 765 -123 1 679 284 355 167 15 chr15 12440143 12440406 -91054568 + MLT1A LTR MaLR 47 349 -25 1 679 942 149 7 13 chr15 12440975 12441125 -91053849 - B1_Mur3 SINE Alu 0 149 1 1 679 537 277 20 29 chr15 12441125 12441243 -91053731 - ID_B1 SINE B4 0 223 32 1 679 285 235 0 0 chr15 12441265 12441316 -91053658 + ID4 SINE ID 21 71 -12 1 679 189 255 19 38 chr15 12441460 12441513 -91053461 + L2b LINE L2 3323 3374 -1 1 679 186 308 202 32 chr15 12441855 12442043 -91052931 + MIRb SINE MIR 1 220 -48 1 679 908 255 83 89 chr15 12442262 12442623 -91052351 - MTE2a LTR MaLR -14 365 7 1 679 222 116 0 0 chr15 12442625 12442668 -91052306 + (A)n Simple_repeat Simple_repeat 1 43 0 1 679 454 167 97 105 chr15 12442690 12442804 -91052170 - ID_B1 SINE B4 0 224 112 1 679 21 0 0 0 chr15 12443311 12443332 -91051642 + AT_rich Low_complexity Low_complexity 1 21 0 1 679 299 313 33 33 chr15 12443853 12444005 -91050969 + RSINE1 SINE B4 1 152 -13 1 679 240 304 113 42 chr15 12444267 12444435 -91050539 + L2c LINE L2 3182 3361 -26 1 679 267 318 34 0 chr15 12444461 12444549 -91050425 + MER94 DNA AcHobo 42 132 -2 1 679 246 200 0 0 chr15 12445976 12446016 -91048958 + ID4 SINE ID 34 73 -10 1 679 250 358 92 0 chr15 12446016 12446136 -91048838 - MER3 DNA MER1_type -76 133 3 1 679 666 160 18 0 chr15 12446312 12446481 -91048493 + GA-rich Low_complexity Low_complexity 1 172 0 1 679 1263 41 0 0 chr15 12446511 12446658 -91048316 - B1_Mus1 SINE Alu 0 148 2 1 679 2185 71 7 0 chr15 12448764 12449044 -91045930 - L1_Mus4 LINE L1 -320 6316 6035 1 679 2206 96 0 22 chr15 12449044 12449364 -91045610 + L1_Mus4 LINE L1 6324 6636 0 1 679 1237 97 17 6 chr15 12449920 12450097 -91044877 + B2_Mm2 SINE B2 2 180 -15 1 679 468 0 0 0 chr15 12450099 12450151 -91044823 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 679 302 318 0 0 chr15 12450775 12450841 -91044133 + MER2B DNA MER2_type 4 69 -267 1 679 647 272 29 24 chr15 12450848 12451055 -91043919 + Lx8 LINE L1 7172 7379 -94 1 679 276 235 0 0 chr15 12451090 12451158 -91043816 + GA-rich Low_complexity Low_complexity 3 70 0 1 679 337 285 108 38 chr15 12451158 12451315 -91043659 + HAL1-3A_ME LINE L1 2277 2444 -414 1 679 281 250 0 0 chr15 12451338 12451390 -91043584 + RSINE1 SINE B4 85 136 -29 1 679 399 73 0 0 chr15 12451393 12451448 -91043526 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 679 338 228 11 11 chr15 12451517 12451610 -91043364 + Lx8 LINE L1 7380 7472 -1 1 680 2063 186 48 13 chr15 12451908 12452300 -91042674 + MTD LTR MaLR 1 406 -13 1 680 1243 160 23 9 chr15 12452523 12452744 -91042230 + URR1B DNA MER1_type 2 225 0 1 680 217 340 39 10 chr15 12453139 12453243 -91041731 + L2a LINE L2 3267 3373 -53 1 680 754 255 47 14 chr15 12453250 12453461 -91041513 - RMER15 LTR ERVL -12 563 346 1 680 1404 157 137 4 chr15 12453916 12454178 -91040796 + ORR1B2 LTR MaLR 63 359 -8 1 680 242 136 0 22 chr15 12455575 12455620 -91039354 - ID_B1 SINE B4 -21 203 160 1 680 212 246 29 44 chr15 12455620 12455638 -91039336 - B1F SINE Alu -22 122 61 1 680 389 261 71 9 chr15 12455767 12455780 -91039194 - RMER30 DNA MER1_type -82 120 102 1 680 216 0 0 0 chr15 12455780 12455804 -91039170 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 680 389 261 71 9 chr15 12455804 12455902 -91039072 - RMER30 DNA MER1_type -101 101 3 1 680 304 329 69 63 chr15 12455903 12456062 -91038912 - ID_B1 SINE B4 -60 164 5 1 680 2442 138 74 35 chr15 12456528 12456985 -91037989 + IAPLTR2_Mm LTR ERVK 1 475 0 1 680 355 118 0 0 chr15 12456987 12457038 -91037936 + IAPEz-int LTR ERVK 3 53 -1934 1 680 3099 54 7 19 chr15 12457038 12457697 -91037277 + IAPEz-int LTR ERVK 17 591 -5890 1 680 450 82 0 32 chr15 12457729 12457792 -91037182 + IAPEz-int LTR ERVK 1359 1419 -5062 1 680 1886 107 4 4 chr15 12457781 12458043 -91036931 + IAPEz-int LTR ERVK 2236 2497 -5183 1 680 948 80 24 0 chr15 12458038 12458163 -91036811 + IAPEz-int LTR ERVK 4783 4910 -2770 1 680 27391 8 1 0 chr15 12458163 12461117 -91033857 + IAPEz-int LTR ERVK 3525 6481 0 1 680 2453 136 74 35 chr15 12461117 12461574 -91033400 + IAPLTR2_Mm LTR ERVK 1 475 0 1 680 404 248 70 70 chr15 12462344 12462500 -91032474 + ID_B1 SINE B4 67 222 -2 1 680 485 219 203 0 chr15 12462517 12462640 -91032334 + B1_Mur2 SINE Alu 2 149 0 1 680 185 154 0 25 chr15 12462640 12462680 -91032294 + GA-rich Low_complexity Low_complexity 1 39 0 1 680 954 112 7 14 chr15 12462859 12463004 -91031970 - URR1A DNA MER1_type -4 222 79 1 680 341 241 0 25 chr15 12463257 12463338 -91031636 + ID_B1 SINE B4 91 169 -55 1 680 338 264 93 19 chr15 12463338 12463357 -91031617 + PB1D10 SINE Alu 32 117 0 1 680 441 286 95 31 chr15 12463437 12463750 -91031224 + MTEb LTR MaLR 18 363 -7 1 680 311 327 0 0 chr15 12464431 12464535 -91030439 + MLT2C2 LTR ERVL 1 104 -360 1 680 412 264 54 9 chr15 12464579 12464690 -91030284 - B1F SINE Alu -32 117 2 1 680 483 340 104 30 chr15 12464691 12464988 -91029986 + MLT2C2 LTR ERVL 97 415 -49 1 680 26 30 0 0 chr15 12465964 12465997 -91028977 + AT_rich Low_complexity Low_complexity 1 33 0 1 680 891 270 50 43 chr15 12466235 12466537 -91028437 - Kanga2_a DNA Tc2 -527 361 58 1 680 760 197 13 26 chr15 12466840 12466991 -91027983 + B1_Mur3 SINE Alu 1 149 0 1 680 1236 41 0 0 chr15 12466998 12467144 -91027830 + B1_Mm SINE Alu 2 147 0 1 680 1458 51 6 0 chr15 12467166 12467343 -91027631 + B2_Mm1t SINE B2 2 179 -14 1 680 273 29 0 0 chr15 12467343 12467377 -91027597 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 680 297 265 44 0 chr15 12468290 12468358 -91026616 + ID4_ SINE ID 3 73 -10 1 680 940 213 14 19 chr15 12468450 12468665 -91026309 + B3 SINE B2 2 215 -1 1 680 214 333 36 18 chr15 12468839 12468949 -91026025 - MIR SINE MIR -70 192 81 1 680 210 143 0 0 chr15 12469500 12469535 -91025439 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 680 1216 127 100 24 chr15 12470014 12470224 -91024750 + URR1A DNA MER1_type 1 226 0 1 680 308 328 26 61 chr15 12470742 12470823 -91024151 + MT2B LTR ERVL 97 165 -419 1 680 548 283 72 0 chr15 12470823 12470961 -91024013 + B1_Mur1 SINE Alu 2 149 0 1 680 431 333 93 58 chr15 12470987 12471422 -91023552 - LTR33 LTR ERVL 0 515 20 1 680 937 269 28 20 chr15 12471558 12471805 -91023169 - B4A SINE B4 -20 272 24 1 680 29 0 0 0 chr15 12472460 12472489 -91022485 + AT_rich Low_complexity Low_complexity 1 29 0 1 680 374 286 33 0 chr15 12472496 12472587 -91022387 + PB1D10 SINE Alu 18 111 -6 1 680 384 261 0 11 chr15 12473038 12473131 -91021843 + B4 SINE B4 2 93 -199 1 680 1011 23 101 43 chr15 12473133 12473272 -91021702 + B1_Mm SINE Alu 1 147 0 1 680 226 300 17 0 chr15 12473359 12473419 -91021555 + RSINE1 SINE B4 89 149 -16 1 680 21 0 0 0 chr15 12473448 12473469 -91021505 + AT_rich Low_complexity Low_complexity 1 21 0 1 680 209 348 33 11 chr15 12473474 12473564 -91021410 + MIR SINE MIR 167 258 -4 1 680 348 358 44 78 chr15 12475088 12475382 -91019592 + HAL1 LINE L1 108 391 -2116 1 680 194 237 16 63 chr15 12475497 12475560 -91019414 + L3 LINE CR1 920 979 -3510 1 680 22 0 0 0 chr15 12475745 12475767 -91019207 + AT_rich Low_complexity Low_complexity 1 22 0 1 680 470 305 63 44 chr15 12475990 12476354 -91018620 + HAL1 LINE L1 841 1211 -1296 1 680 322 205 66 88 chr15 12477012 12477103 -91017871 + PB1D9 SINE Alu 2 90 -30 1 680 247 218 294 10 chr15 12477013 12477115 -91017859 + ID_B1 SINE B4 84 214 -10 1 680 225 0 0 0 chr15 12477424 12477449 -91017525 + (T)n Simple_repeat Simple_repeat 1 25 0 1 680 756 163 46 8 chr15 12477497 12477627 -91017347 - B1_Mus1 SINE Alu -13 135 1 1 680 1227 118 32 5 chr15 12477903 12478090 -91016884 + B2_Mm2 SINE B2 1 192 -3 1 680 256 247 37 93 chr15 12478163 12478270 -91016704 + MT2B2 LTR ERVL 162 262 -322 1 680 406 172 62 41 chr15 12478177 12478274 -91016700 + PB1D7 SINE Alu 15 113 -7 1 680 310 266 102 42 chr15 12478302 12478420 -91016554 + L1M5 LINE L1 3028 3152 -2994 1 680 189 107 0 0 chr15 12479154 12479182 -91015792 + (CGAGG)n Simple_repeat Simple_repeat 4 31 0 1 680 2670 206 75 70 chr15 12480999 12481347 -91013627 - RCHARR1 DNA MER1_type -5 969 617 1 680 605 179 101 36 chr15 12481347 12481486 -91013488 + B1_Mur1 SINE Alu 2 149 0 1 680 2670 206 75 70 chr15 12481486 12481889 -91013085 - RCHARR1 DNA MER1_type -358 616 215 1 680 733 260 41 55 chr15 12481908 12482201 -91012773 + B4 SINE B4 4 292 0 1 680 684 228 0 0 chr15 12482203 12482489 -91012485 + (CA)n Simple_repeat Simple_repeat 1 286 0 1 680 495 250 201 0 chr15 12482540 12482704 -91012270 - RCHARR1 DNA MER1_type -771 203 7 1 680 369 0 0 0 chr15 12483300 12483341 -91011633 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 680 652 284 103 12 chr15 12483762 12484015 -91010959 + L3b LINE CR1 1 276 -206 1 680 469 338 108 13 chr15 12484426 12484657 -91010317 - MIR SINE MIR -1 261 9 1 680 893 216 13 98 chr15 12484854 12485090 -91009884 + B3 SINE B2 1 216 0 1 680 1257 27 0 0 chr15 12486471 12486618 -91008356 - B1_Mus2 SINE Alu 0 147 1 1 680 453 332 52 66 chr15 12486902 12487115 -91007859 + MER20 DNA MER1_type 5 214 -5 1 680 371 330 132 39 chr15 12488077 12488358 -91006616 + L2b LINE L2 3066 3372 -3 1 680 215 342 14 0 chr15 12488495 12488568 -91006406 - L2a LINE L2 0 3426 3353 1 680 649 278 0 7 chr15 12488619 12488764 -91006210 + RSINE1 SINE B4 5 148 -17 1 680 886 227 74 20 chr15 12488849 12489051 -91005923 - ID_B1 SINE B4 -10 214 2 1 680 261 338 81 7 chr15 12489272 12489421 -91005553 + LTR82B Low_complexity ERVL 13 172 -658 1 680 446 332 138 47 chr15 12489340 12489918 -91005056 + LTR82B Low_complexity ERVL 139 769 -61 1 680 212 194 0 0 chr15 12490708 12490744 -91004230 + (TTA)n Simple_repeat Simple_repeat 3 38 0 1 680 526 170 65 9 chr15 12490749 12490856 -91004118 - PB1D7 SINE Alu -6 114 2 1 680 226 237 140 0 chr15 12491325 12491418 -91003556 - MER53 DNA hAT -4 189 84 1 680 216 0 0 0 chr15 12491512 12491536 -91003438 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 680 1985 80 11 4 chr15 12491567 12491842 -91003132 + Lx3_Mus LINE L1 6733 7009 0 1 680 204 40 0 0 chr15 12491850 12491875 -91003099 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 680 1314 85 17 0 chr15 12491882 12492059 -91002915 + B2_Mm2 SINE B2 16 195 0 1 680 220 327 12 23 chr15 12492478 12492650 -91002324 + (CACAT)n Simple_repeat Simple_repeat 4 173 0 1 680 394 326 76 28 chr15 12493283 12493428 -91001546 + RSINE1 SINE B4 2 153 -12 1 680 324 295 163 37 chr15 12493912 12494102 -91000872 - MIRb SINE MIR -2 266 53 1 680 538 235 70 49 chr15 12494292 12494435 -91000539 + B1F SINE Alu 2 147 -2 1 680 713 244 108 13 chr15 12494519 12494677 -91000297 + B3A SINE B2 1 173 -25 1 680 498 223 212 15 chr15 12495844 12495976 -90998998 - RSINE1 SINE B4 -5 160 3 1 680 1648 0 0 0 chr15 12495983 12496196 -90998778 - L1Md_T LINE L1 0 6582 6397 1 680 1381 73 5 25 chr15 12496212 12496408 -90998566 - B2_Mm1a SINE B2 0 193 2 1 680 275 0 29 0 chr15 12496427 12496462 -90998512 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1 680 329 205 21 117 chr15 12496566 12496660 -90998314 - ID_B1 SINE B4 -28 196 112 1 680 324 279 94 141 chr15 12496749 12497311 -90997663 - MLT2F LTR ERVL -3 660 125 1 680 293 247 21 41 chr15 12497505 12497602 -90997372 - MER58C DNA MER1_type -1 214 120 1 680 1122 73 0 0 chr15 12497798 12497935 -90997039 + B1_Mus1 SINE Alu 1 137 -11 1 680 315 0 0 0 chr15 12497935 12497970 -90997004 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 680 553 281 0 14 chr15 12498468 12498609 -90996365 - ID_B1 SINE B4 -8 216 78 1 680 784 139 33 0 chr15 12498756 12498878 -90996096 + B1_Mus1 SINE Alu 1 126 -22 1 680 423 174 0 0 chr15 12498881 12498967 -90996007 + GA-rich Low_complexity Low_complexity 2 87 0 1 680 348 237 135 31 chr15 12499026 12499122 -90995852 + PB1D7 SINE Alu 11 116 -4 1 680 564 189 54 0 chr15 12499485 12499596 -90995378 + B1_Mur2 SINE Alu 13 129 -20 1 680 1196 96 0 6 chr15 12499631 12499809 -90995165 + (TTC)n Simple_repeat Simple_repeat 3 179 0 1 680 406 108 27 0 chr15 12499809 12499883 -90995091 + (TCC)n Simple_repeat Simple_repeat 2 77 0 1 680 210 105 0 0 chr15 12499913 12499951 -90995023 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 1 680 351 0 0 0 chr15 12499961 12500000 -90994974 + (T)n Simple_repeat Simple_repeat 1 39 0 1 680 1095 66 0 0 chr15 12500002 12500138 -90994836 - B1_Mus2 SINE Alu -11 136 1 1 680 312 309 163 109 chr15 12500174 12500450 -90994524 - ORR1E LTR MaLR -7 352 62 2 680 481 276 34 78 chr15 12500494 12500701 -90994273 - L1M3 LINE L1 -400 5780 5581 3 680 225 160 60 0 chr15 12500835 12500885 -90994089 + Lx7 LINE L1 7644 7696 0 4 680 32 57 0 0 chr15 12500885 12500938 -90994036 + AT_rich Low_complexity Low_complexity 1 53 0 5 680 646 264 0 40 chr15 12501563 12501713 -90993261 + B1_Mur2 SINE Alu 6 149 0 6 680 30 0 0 0 chr15 12501736 12501766 -90993208 + AT_rich Low_complexity Low_complexity 1 30 0 7 680 3563 15 5 0 chr15 12501959 12502353 -90992621 - MTA_Mm LTR MaLR 0 396 1 8 680 481 31 0 0 chr15 12502353 12502417 -90992557 - MTA_Mm-int LTR MaLR 0 1098 1035 8 680 861 10 0 0 chr15 12502416 12502513 -90992461 + MTA_Mm LTR MaLR 300 396 0 9 680 378 0 0 0 chr15 12502563 12502605 -90992369 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 680 216 0 0 0 chr15 12502614 12502638 -90992336 + (CCTG)n Simple_repeat Simple_repeat 2 25 0 1 680 693 234 8 0 chr15 12502900 12503024 -90991950 + RSINE1 SINE B4 4 128 -37 1 680 239 219 11 58 chr15 12503147 12503234 -90991740 + L1MB5 LINE L1 5275 5357 -821 1 680 409 250 9 57 chr15 12503353 12503459 -90991515 + PB1D10 SINE Alu 9 109 -8 1 680 311 267 35 0 chr15 12503477 12503563 -90991411 + L1MB5 LINE L1 5478 5566 -608 1 680 305 316 88 101 chr15 12503688 12503836 -90991138 + RSINE1 SINE B4 5 150 -15 1 680 290 238 48 0 chr15 12504117 12504201 -90990773 + L1MB5 LINE L1 5928 6015 -159 1 680 207 0 0 0 chr15 12505825 12505848 -90989126 + (A)n Simple_repeat Simple_repeat 1 23 0 1 680 746 292 24 36 chr15 12505874 12506123 -90988851 + B4A SINE B4 1 246 -46 1 680 254 182 15 0 chr15 12506123 12506189 -90988785 + GA-rich Low_complexity Low_complexity 1 67 0 1 680 570 29 0 0 chr15 12506385 12506453 -90988521 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 680 21 0 0 0 chr15 12507889 12507910 -90987064 + GC_rich Low_complexity Low_complexity 1 21 0 2 680 511 298 73 86 chr15 12508047 12508124 -90986850 - MLT1E3 LTR MaLR -8 616 549 2 680 651 208 185 0 chr15 12508124 12508302 -90986672 - B3 SINE B2 -4 212 2 2 680 511 298 73 86 chr15 12508302 12508525 -90986449 - MLT1E3 LTR MaLR -76 548 320 2 680 1210 61 0 0 chr15 12508781 12508928 -90986046 + B1_Mm SINE Alu 1 147 0 2 680 200 34 0 33 chr15 12508929 12508959 -90986015 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 2 680 209 163 0 65 chr15 12509521 12509567 -90985407 - MER5A DNA MER1_type -37 152 110 2 680 512 198 0 0 chr15 12509881 12509972 -90985002 + PB1D10 SINE Alu 17 107 -10 2 680 926 102 23 23 chr15 12509972 12510333 -90984641 + (CA)n Simple_repeat Simple_repeat 1 361 0 2 680 441 184 18 64 chr15 12510637 12510747 -90984227 + PB1D10 SINE Alu 12 116 -1 2 680 546 202 0 37 chr15 12510749 12510857 -90984117 + B1_Mur2 SINE Alu 46 149 0 2 680 242 281 156 11 chr15 12511114 12511204 -90983770 - PB1D10 SINE Alu 0 117 15 3 680 249 33 0 0 chr15 12511287 12511317 -90983657 + (CAA)n Simple_repeat Simple_repeat 1 30 0 3 680 319 362 111 12 chr15 12511434 12511596 -90983378 - B3 SINE B2 -35 181 4 3 680 771 200 0 0 chr15 12511629 12511759 -90983215 - B3 SINE B2 -86 130 1 3 680 1091 163 114 0 chr15 12512147 12512349 -90982625 - URR1A DNA MER1_type 0 226 2 3 680 856 196 25 45 chr15 12512404 12512602 -90982372 + B3A SINE B2 5 198 0 3 680 472 216 65 29 chr15 12512610 12512748 -90982226 + B1_Mus1 SINE Alu 5 147 -1 3 680 731 222 0 11 chr15 12513265 12513411 -90981563 + B1_Mur1 SINE Alu 2 140 -9 3 680 281 292 0 27 chr15 12514265 12514365 -90980609 - ID4 SINE ID -51 101 5 3 680 721 167 0 0 chr15 12514384 12514492 -90980482 - B1_Mus2 SINE Alu -39 108 1 3 680 700 267 72 19 chr15 12515389 12515590 -90979384 + ID_B1 SINE B4 40 253 -39 4 680 561 146 104 0 chr15 12515708 12515804 -90979170 + B1_Mus1 SINE Alu 3 108 -40 4 680 370 310 193 15 chr15 12516582 12516843 -90978131 - Tigger15a DNA TcMar -10 705 398 4 680 621 254 99 6 chr15 12517336 12517518 -90977456 + MER44A DNA MER2_type 32 230 -109 4 680 1344 259 140 10 chr15 12518688 12519101 -90975873 - MLT1C LTR MaLR 0 467 1 4 680 734 288 153 40 chr15 12519335 12519635 -90975339 + MER2 DNA MER2_type 7 340 -5 4 680 245 325 0 25 chr15 12519703 12519782 -90975192 + MLT1A0 LTR MaLR 3 79 -286 4 680 399 306 0 10 chr15 12520383 12520482 -90974492 + MIR SINE MIR 5 102 -160 4 680 1182 297 215 8 chr15 12520726 12521218 -90973756 + MER77 LTR ERVL 6 599 -8 4 680 423 0 0 0 chr15 12522821 12522868 -90972106 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 680 1464 73 21 0 chr15 12523603 12523794 -90971180 - B2_Mm2 SINE B2 0 195 1 5 680 618 191 30 15 chr15 12524172 12524305 -90970669 + B1_Mur1 SINE Alu 14 148 -1 5 680 603 44 33 0 chr15 12524312 12524403 -90970571 + (GA)n Simple_repeat Simple_repeat 2 95 0 5 680 938 55 27 7 chr15 12524405 12524551 -90970423 + (GGAA)n Simple_repeat Simple_repeat 2 150 0 5 680 327 320 0 4 chr15 12525145 12525401 -90969573 + CT-rich Low_complexity Low_complexity 1 255 0 5 680 1034 58 7 0 chr15 12525476 12525614 -90969360 + (TC)n Simple_repeat Simple_repeat 2 140 0 5 680 210 312 26 0 chr15 12525711 12525788 -90969186 - ID4_ SINE ID 0 83 5 5 680 210 37 0 0 chr15 12525814 12525841 -90969133 + (TTG)n Simple_repeat Simple_repeat 1 27 0 5 680 476 291 47 16 chr15 12525965 12526094 -90968880 - RSINE1 SINE B4 -5 160 28 5 680 247 306 54 114 chr15 12526072 12526141 -90968833 + B4 SINE B4 15 73 -219 5 680 371 297 0 35 chr15 12526141 12526256 -90968718 + PB1 SINE Alu 1 111 -16 6 680 1197 75 0 0 chr15 12527230 12527377 -90967597 - B1_Mus1 SINE Alu 0 148 2 6 680 456 195 25 12 chr15 12529741 12529902 -90965072 + (TG)n Simple_repeat Simple_repeat 2 164 0 6 680 304 206 6 46 chr15 12529918 12530091 -90964883 + (TATATG)n Simple_repeat Simple_repeat 2 167 0 6 680 869 279 5 5 chr15 12530172 12530388 -90964586 - B3 SINE B2 0 216 1 6 680 4388 121 29 28 chr15 12530631 12531381 -90963593 + RMER17A LTR ERVK 1 751 0 6 680 1036 204 35 10 chr15 12531667 12531870 -90963104 + B3 SINE B2 3 210 -6 6 680 849 178 7 14 chr15 12531928 12532076 -90962898 + B1_Mur3 SINE Alu 2 148 -1 6 680 222 282 25 37 chr15 12532768 12532849 -90962125 - MIR3 SINE MIR -4 204 125 6 680 216 0 0 0 chr15 12533077 12533101 -90961873 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 680 902 188 54 39 chr15 12533107 12533146 -90961828 + B3 SINE B2 3 42 -174 7 680 1835 221 63 10 chr15 12533146 12533543 -90961431 - MTD LTR MaLR 0 419 2 7 680 902 188 54 39 chr15 12533543 12533708 -90961266 + B3 SINE B2 43 210 -6 7 680 241 329 0 0 chr15 12534287 12534363 -90960611 + (TATATG)n Simple_repeat Simple_repeat 5 80 0 7 680 752 153 80 44 chr15 12534553 12534690 -90960284 - B1_Mus1 SINE Alu -6 142 1 7 680 299 291 13 0 chr15 12534825 12534904 -90960070 + MIRc SINE MIR 70 149 -119 7 680 247 296 71 44 chr15 12536803 12536916 -90958058 + MLT1A1 LTR MaLR 290 405 -3 7 680 471 247 167 83 chr15 12538780 12539032 -90955942 - ORR1D2 LTR MaLR -1 369 97 7 680 316 250 0 29 chr15 12539141 12539211 -90955763 - ORR1D2 LTR MaLR -306 68 1 7 680 256 230 53 75 chr15 12539361 12539455 -90955519 + MER53 DNA hAT 80 171 -22 7 680 243 178 0 62 chr15 12541393 12541441 -90953533 - L2a LINE L2 -4 3422 3378 7 680 581 209 148 45 chr15 12541543 12541698 -90953276 + B2_Mm2 SINE B2 1 171 -24 7 680 567 29 0 0 chr15 12541702 12541771 -90953203 + (TA)n Simple_repeat Simple_repeat 1 69 0 8 680 765 191 14 14 chr15 12542416 12542559 -90952415 - B3 SINE B2 -26 190 48 8 680 612 27 0 0 chr15 12542559 12542633 -90952341 + (CA)n Simple_repeat Simple_repeat 2 75 0 8 680 342 115 0 0 chr15 12542633 12542685 -90952289 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 680 459 0 0 0 chr15 12542685 12542735 -90952239 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 8 680 560 257 45 45 chr15 12543895 12544050 -90950924 + MER63A DNA AcHobo 3 157 -53 8 680 826 272 29 14 chr15 12544297 12544506 -90950468 + B4 SINE B4 2 213 -79 8 680 535 114 32 0 chr15 12544528 12544651 -90950323 + (CAGA)n Simple_repeat Simple_repeat 2 128 0 8 680 700 184 27 34 chr15 12544728 12544874 -90950100 - B1_Mur1 SINE Alu 0 149 5 8 680 557 284 55 18 chr15 12544961 12545126 -90949848 + B3A SINE B2 3 173 -25 8 680 266 254 0 0 chr15 12545546 12545609 -90949365 - ID4 SINE ID -18 65 3 9 680 476 282 0 17 chr15 12545618 12545737 -90949237 - PB1 SINE Alu 0 127 11 9 680 1352 146 27 9 chr15 12546753 12546974 -90948000 - URR1B DNA MER1_type 0 225 1 9 680 725 213 0 0 chr15 12550358 12550485 -90944489 + B1_Mus2 SINE Alu 1 127 -20 9 680 363 44 0 0 chr15 12550488 12550533 -90944441 + (TC)n Simple_repeat Simple_repeat 1 45 0 9 680 393 22 0 0 chr15 12550533 12550578 -90944396 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 680 1023 103 17 17 chr15 12550585 12550762 -90944212 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 9 680 788 154 278 0 chr15 12550792 12550961 -90944013 + B3 SINE B2 1 216 0 9 680 204 67 0 0 chr15 12551251 12551281 -90943693 + (T)n Simple_repeat Simple_repeat 1 30 0 9 680 650 219 0 30 chr15 12551358 12551490 -90943484 + ID_B1 SINE B4 97 224 0 9 680 685 277 0 26 chr15 12552822 12552974 -90942000 - RSINE1 SINE B4 -9 156 9 1 680 919 199 58 26 chr15 12553378 12553569 -90941405 + B3A SINE B2 2 198 0 1 680 671 280 171 40 chr15 12553662 12553951 -90941023 - MTE2b LTR MaLR -3 376 43 1 680 1390 168 116 174 chr15 12553951 12554348 -90940626 + ORR1D1 LTR MaLR 1 374 0 1 680 671 288 103 51 chr15 12554348 12554394 -90940580 - MTE2b LTR MaLR -337 42 1 1 680 522 0 0 0 chr15 12554862 12554920 -90940054 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 1 680 1299 109 5 11 chr15 12554921 12555106 -90939868 - B2_Mm2 SINE B2 -11 184 1 1 680 1591 260 92 34 chr15 12556157 12556468 -90938506 + L1MB5 LINE L1 5484 5797 -377 1 680 612 263 144 0 chr15 12556468 12556662 -90938312 - ID_B1 SINE B4 -1 223 2 1 680 1591 260 92 34 chr15 12556662 12556972 -90938002 + L1MB5 LINE L1 5798 6141 -33 1 680 258 32 0 0 chr15 12557073 12557104 -90937870 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 680 563 251 93 52 chr15 12557131 12557324 -90937650 - B3 SINE B2 -1 215 15 1 680 690 282 14 76 chr15 12559382 12559593 -90935381 + B3A SINE B2 1 198 0 1 680 201 121 0 0 chr15 12560302 12560335 -90934639 + (GGA)n Simple_repeat Simple_repeat 1 33 0 1 680 182 37 37 0 chr15 12560549 12560576 -90934398 + (GGAA)n Simple_repeat Simple_repeat 4 31 0 1 680 356 213 174 123 chr15 12561653 12561808 -90933166 + RSINE1 SINE B4 3 165 0 1 680 893 168 6 0 chr15 12561808 12561987 -90932987 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 680 1239 89 0 0 chr15 12562015 12562194 -90932780 + (CA)n Simple_repeat Simple_repeat 1 179 0 1 680 881 255 42 5 chr15 12563009 12563222 -90931752 + ID_B1 SINE B4 2 222 -2 1 680 283 327 96 12 chr15 12564372 12564539 -90930435 - MIR3 SINE MIR -23 185 5 1 680 189 188 0 94 chr15 12565089 12565142 -90929832 + L3 LINE CR1 2906 2953 -1536 1 680 302 318 123 30 chr15 12566248 12566533 -90928441 + L2a LINE L2 2986 3354 -72 1 680 624 157 164 9 chr15 12567163 12567279 -90927695 - B1_Mus2 SINE Alu -11 136 3 1 680 656 257 115 51 chr15 12567285 12567310 -90927664 - B4A SINE B4 -43 249 226 1 680 641 314 32 11 chr15 12567310 12567497 -90927477 - B3A SINE B2 -7 191 1 1 680 656 257 115 51 chr15 12567497 12567705 -90927269 - B4A SINE B4 -67 225 1 1 680 389 294 91 91 chr15 12569643 12569939 -90925035 - L1M1 LINE L1 -523 5780 5485 1 680 628 231 13 26 chr15 12569949 12570100 -90924874 - B1_Mur1 SINE Alu 0 149 1 1 680 25 0 0 0 chr15 12570105 12570130 -90924844 + AT_rich Low_complexity Low_complexity 1 25 0 1 680 477 272 29 87 chr15 12570162 12570196 -90924778 + ID_B1 SINE B4 54 216 -8 1 680 730 160 7 58 chr15 12570196 12570335 -90924639 + B1_Mur1 SINE Alu 10 141 -8 1 680 183 42 0 0 chr15 12571110 12571134 -90923840 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1 680 343 324 0 37 chr15 12571354 12571463 -90923511 - L2a LINE L2 -1 3425 3321 1 680 404 268 94 31 chr15 12571693 12571820 -90923154 + RSINE1 SINE B4 3 137 -28 1 680 1143 182 39 26 chr15 12571826 12572124 -90922850 + Lx5 LINE L1 909 1269 -6459 1 680 21081 153 39 15 chr15 12572096 12577029 -90917945 + Lx5 LINE L1 1985 7045 -5 1 680 324 239 112 11 chr15 12577486 12577575 -90917399 - U1 snRNA snRNA -62 103 6 1 680 240 331 38 38 chr15 12577910 12578042 -90916932 - RMER12 LTR ERVK -460 862 731 1 680 906 163 0 0 chr15 12578545 12578680 -90916294 + B1_Mur1 SINE Alu 2 136 -13 1 680 213 121 0 0 chr15 12578682 12578715 -90916259 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 680 309 95 54 54 chr15 12578718 12578829 -90916145 + (CAGAGA)n Simple_repeat Simple_repeat 2 112 0 1 680 677 309 62 90 chr15 12579130 12579486 -90915488 + ORR1E LTR MaLR 3 348 -11 1 680 204 352 12 16 chr15 12579501 12579600 -90915374 - MIR SINE MIR -157 111 15 1 680 639 255 62 7 chr15 12579755 12579901 -90915073 + B4A SINE B4 2 155 -137 1 680 309 169 0 0 chr15 12580025 12580084 -90914890 + GA-rich Low_complexity Low_complexity 2 60 0 1 680 491 169 22 39 chr15 12580970 12581149 -90913825 + G-rich Low_complexity Low_complexity 5 180 0 1 680 363 121 0 0 chr15 12581295 12581353 -90913621 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 680 641 221 33 7 chr15 12581358 12581508 -90913466 - B3A SINE B2 -44 154 1 1 680 395 304 139 48 chr15 12581532 12581826 -90913148 - L1ME4a LINE L1 -239 5885 5565 1 680 630 262 291 10 chr15 12582537 12582826 -90912148 + ORR1D2 LTR MaLR 1 370 0 1 681 640 219 124 6 chr15 12583037 12583198 -90911776 + MTEb LTR MaLR 1 180 -199 1 681 487 293 72 13 chr15 12583199 12583319 -90911655 + RSINE1 SINE B4 3 120 -45 1 681 303 28 0 0 chr15 12583319 12583355 -90911619 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 681 487 293 72 13 chr15 12583355 12583386 -90911588 + RSINE1 SINE B4 121 162 -3 1 681 277 233 0 2 chr15 12583427 12583491 -90911483 + MTEb LTR MaLR 162 224 -155 1 681 1689 198 38 20 chr15 12583493 12583838 -90911136 - ORR1D1 LTR MaLR 0 374 24 1 681 304 209 193 11 chr15 12583847 12583947 -90911027 + MTEb LTR MaLR 209 383 -36 1 681 191 277 78 87 chr15 12584004 12584107 -90910867 + MIR SINE MIR 156 257 -5 1 681 554 262 74 18 chr15 12585739 12585902 -90909072 - MTEb LTR MaLR 0 379 208 1 681 181 83 0 53 chr15 12585936 12585974 -90909000 + (CCCTAA)n Simple_repeat Simple_repeat 3 38 0 1 681 294 329 186 6 chr15 12585980 12586136 -90908838 - MLT1K LTR MaLR -209 386 203 1 681 373 278 40 27 chr15 12586389 12586537 -90908437 - L1ME3A LINE L1 -113 6060 5911 1 681 4501 12 0 2 chr15 12586580 12587074 -90907900 - MT2_Mm LTR ERVL 0 493 1 1 681 837 330 60 6 chr15 12587860 12588360 -90906614 + L1MB5 LINE L1 5588 6145 -39 1 681 303 93 0 0 chr15 12589015 12589058 -90905916 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 681 345 298 35 31 chr15 12589672 12589847 -90905127 + MIRb SINE MIR 30 208 -60 1 681 656 255 232 9 chr15 12589870 12590103 -90904871 + B4 SINE B4 3 287 -5 1 681 464 264 62 81 chr15 12590667 12590828 -90904146 + MER20 DNA MER1_type 16 173 -46 1 681 264 295 38 25 chr15 12591417 12591497 -90903477 - MIRc SINE MIR -83 185 105 1 681 1020 53 0 8 chr15 12591710 12591831 -90903143 + B1_Mus2 SINE Alu 17 137 -10 1 681 194 0 39 0 chr15 12591831 12591857 -90903117 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 681 276 30 0 0 chr15 12592033 12592066 -90902908 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 681 194 340 0 0 chr15 12592174 12592221 -90902753 - L2b LINE L2 -226 3149 3103 1 681 1002 93 0 0 chr15 12592233 12592362 -90902612 + Lx2 LINE L1 6517 6645 -352 1 681 1178 120 4 170 chr15 12592360 12592631 -90902343 + Lx LINE L1 6427 6652 -2 1 681 601 291 92 53 chr15 12593220 12593427 -90901547 + B4A SINE B4 1 215 -77 1 681 366 23 0 0 chr15 12593438 12593481 -90901493 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 681 517 287 24 16 chr15 12593491 12593615 -90901359 + RSINE1 SINE B4 41 165 0 1 681 324 274 0 0 chr15 12593630 12593692 -90901282 + B4A SINE B4 217 278 -14 1 681 243 0 0 0 chr15 12593695 12593722 -90901252 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 681 187 212 0 0 chr15 12593749 12593782 -90901192 + L2c LINE L2 3126 3158 -229 1 681 264 59 0 0 chr15 12593832 12593866 -90901108 + (TCTG)n Simple_repeat Simple_repeat 1 34 0 1 681 900 258 9 9 chr15 12593866 12594077 -90900897 - ID_B1 SINE B4 -13 211 1 1 681 390 311 168 36 chr15 12594180 12594216 -90900758 + MLT1N2 LTR MaLR 13 48 -514 1 681 2336 58 40 95 chr15 12594216 12594562 -90900412 + ORR1A2 LTR MaLR 1 327 0 1 681 390 311 168 36 chr15 12594562 12594775 -90900199 + MLT1N2 LTR MaLR 49 295 -267 1 681 278 312 20 40 chr15 12595318 12595418 -90899556 - MTE2a LTR MaLR -4 375 278 1 681 988 251 64 38 chr15 12595561 12595821 -90899153 - ORR1D2 LTR MaLR 0 370 104 1 681 1703 121 78 35 chr15 12595821 12596186 -90898788 + ORR1A2 LTR MaLR 1 346 0 1 681 490 244 88 95 chr15 12597090 12597314 -90897660 + MLT1B LTR MaLR 148 353 -37 1 681 1225 125 28 24 chr15 12598619 12598832 -90896142 - URR1A DNA MER1_type -9 217 4 1 681 701 237 17 23 chr15 12599396 12599573 -90895401 + B3A SINE B2 3 178 -20 1 681 351 0 0 0 chr15 12599589 12599628 -90895346 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 681 411 308 99 48 chr15 12599768 12600161 -90894813 + MER74B LTR ERVL 94 619 -3 1 681 315 49 0 0 chr15 12600254 12600295 -90894679 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 681 566 118 11 0 chr15 12600295 12600388 -90894586 + (GA)n Simple_repeat Simple_repeat 2 95 0 1 681 705 212 141 16 chr15 12601271 12601463 -90893511 - ID_B1 SINE B4 -7 217 2 1 681 2178 122 25 0 chr15 12601691 12602010 -90892964 - ORR1A2 LTR MaLR 0 327 1 1 681 1805 189 70 17 chr15 12602807 12602996 -90891978 - ORR1D1 LTR MaLR 0 374 167 1 681 525 16 0 0 chr15 12602996 12603058 -90891916 + (GA)n Simple_repeat Simple_repeat 1 62 0 1 681 1805 189 70 17 chr15 12603058 12603223 -90891751 - ORR1D1 LTR MaLR -208 166 2 1 681 543 333 49 29 chr15 12603301 12603727 -90891247 + MLT1H1 LTR MaLR 10 500 -55 1 681 427 277 25 8 chr15 12604801 12604921 -90890053 + RSINE1 SINE B4 2 123 -42 1 681 25 0 0 0 chr15 12604944 12604969 -90890005 + AT_rich Low_complexity Low_complexity 1 25 0 1 681 243 0 0 0 chr15 12605144 12605171 -90889803 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 681 1079 158 256 89 chr15 12605523 12605836 -90889138 + ORR1B2 LTR MaLR 1 365 -2 1 681 1465 75 16 0 chr15 12606229 12606417 -90888557 + B2_Mm2 SINE B2 2 192 -3 1 681 263 283 0 0 chr15 12607658 12607711 -90887263 - RSINE1 SINE B4 -110 55 3 1 681 452 293 41 0 chr15 12607735 12607858 -90887116 - B1_Mur1 SINE Alu -7 142 15 1 681 286 308 89 89 chr15 12607740 12607943 -90887031 - MT2B LTR ERVL -312 289 87 1 681 1135 89 0 32 chr15 12607998 12608183 -90886791 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 1 681 635 277 0 7 chr15 12608412 12608561 -90886413 - B1F SINE Alu -1 148 1 2 681 405 256 68 56 chr15 12608697 12608858 -90886116 - CYRA11_Mm Unknown Y-chromosome -283 334 172 2 681 952 119 0 14 chr15 12608714 12608859 -90886115 + URR1B DNA MER1_type 83 225 0 2 681 417 333 0 10 chr15 12608877 12608980 -90885994 + RSINE1 SINE B4 47 148 -17 2 681 25 51 0 0 chr15 12609000 12609039 -90885935 + AT_rich Low_complexity Low_complexity 1 39 0 2 681 244 337 38 38 chr15 12609054 12609159 -90885815 - RSINE1 SINE B4 0 165 61 2 681 447 19 0 0 chr15 12609161 12609213 -90885761 + (TATG)n Simple_repeat Simple_repeat 3 54 0 2 681 268 28 0 77 chr15 12609812 12609851 -90885123 - MTB_Mm LTR MaLR -371 36 1 2 681 220 291 25 92 chr15 12609851 12609877 -90885097 - B2_Mm2 SINE B2 -49 146 1 2 681 654 153 183 0 chr15 12609877 12610008 -90884966 - ID_B1 SINE B4 -69 155 1 2 681 507 17 0 0 chr15 12610274 12610334 -90884640 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 681 244 289 13 13 chr15 12610452 12610529 -90884445 + MamRep434 DNA TcMar 326 402 -24 2 681 2257 132 38 150 chr15 12611226 12611700 -90883274 + MTC LTR MaLR 1 421 0 2 681 323 256 14 2 chr15 12611815 12611895 -90883079 + ID4 SINE ID 11 90 -62 2 681 279 276 108 5 chr15 12611924 12612082 -90882892 + MIRc SINE MIR 19 186 -82 2 681 399 21 0 0 chr15 12612728 12612776 -90882198 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 681 315 327 20 10 chr15 12613130 12613232 -90881742 - MER81 DNA AcHobo -2 112 10 2 681 347 333 26 0 chr15 12613862 12613979 -90880995 - Tigger7 DNA MER2_type 0 2491 2372 2 681 1863 156 172 70 chr15 12614048 12614461 -90880513 - RMER15 LTR ERVL 0 575 121 2 681 1098 210 109 14 chr15 12614498 12614875 -90880099 + RMER15-int LTR ERVL 4496 4908 -91 2 681 2697 174 13 114 chr15 12614964 12615569 -90879405 + RMER15 LTR ERVL 32 575 0 2 681 842 261 111 17 chr15 12615588 12615877 -90879097 - Lx8 LINE L1 -3 7470 7155 2 681 413 235 0 0 chr15 12615891 12615976 -90878998 - B1_Mur1 SINE Alu -8 141 57 2 681 377 257 88 0 chr15 12615981 12616094 -90878880 - Tigger7 DNA MER2_type -2176 315 193 2 681 519 274 86 0 chr15 12616399 12616516 -90878458 - Tigger7 DNA MER2_type -2269 222 96 2 681 289 244 31 62 chr15 12616651 12616747 -90878227 - Tigger7 DNA MER2_type -2396 95 3 2 681 1340 243 32 26 chr15 12617072 12617415 -90877559 + MTE2b LTR MaLR 29 373 -6 2 681 227 312 62 9 chr15 12617656 12617769 -90877205 + MIRb SINE MIR 102 220 -48 2 681 402 226 10 97 chr15 12618216 12618319 -90876655 - Lx8 LINE L1 -225 7248 7155 2 681 532 116 35 66 chr15 12618360 12618474 -90876500 - B1F1 SINE Alu 0 149 2 2 681 25 65 0 0 chr15 12618645 12618691 -90876283 + AT_rich Low_complexity Low_complexity 1 46 0 2 681 1966 172 57 0 chr15 12618807 12619161 -90875813 + ORR1D1 LTR MaLR 1 374 0 2 681 522 233 0 46 chr15 12619458 12619566 -90875408 + PB1D10 SINE Alu 13 115 -2 2 681 227 54 27 0 chr15 12620265 12620302 -90874672 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 681 244 214 0 76 chr15 12620406 12620464 -90874510 + B1F1 SINE Alu 13 66 -83 2 681 360 156 0 0 chr15 12620467 12620557 -90874417 + (TA)n Simple_repeat Simple_repeat 1 90 0 2 681 1037 194 48 10 chr15 12620567 12620775 -90874199 + B3 SINE B2 1 216 0 2 681 282 73 0 0 chr15 12620776 12620817 -90874157 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 2 681 299 289 76 34 chr15 12620828 12620946 -90874028 + YREP_Mm Unknown Unknown 151 273 -1539 2 681 419 270 0 10 chr15 12620850 12620951 -90874023 - ID_B1 SINE B4 -4 220 121 2 681 470 326 50 18 chr15 12621125 12621347 -90873627 + MLT1D LTR MaLR 8 236 -269 2 681 203 236 208 0 chr15 12621615 12621687 -90873287 - MIRb SINE MIR -87 181 95 2 681 339 25 0 0 chr15 12622056 12622096 -90872878 + (CAGA)n Simple_repeat Simple_repeat 3 42 0 2 681 545 347 99 17 chr15 12623086 12623388 -90871586 + MER46C DNA MER2_type 1 327 -11 2 681 645 286 177 26 chr15 12623510 12623736 -90871238 + B4A SINE B4 27 286 -6 2 681 1904 127 180 0 chr15 12623760 12624083 -90870891 + ORR1B1 LTR MaLR 14 394 0 2 681 450 285 217 6 chr15 12624210 12624376 -90870598 + MLT1A LTR MaLR 173 373 -1 2 681 412 289 56 37 chr15 12624376 12624531 -90870443 + MLT1A-int LTR MaLR 12 169 -1202 2 681 1393 181 128 12 chr15 12624541 12624571 -90870403 + ORR1D1 LTR MaLR 1 30 -344 2 681 423 0 0 0 chr15 12624571 12624618 -90870356 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 681 1393 181 128 12 chr15 12624618 12624810 -90870164 + ORR1D1 LTR MaLR 31 248 -126 2 681 3450 35 2 0 chr15 12624810 12625205 -90869769 + MTA_Mm LTR MaLR 1 396 0 2 681 1393 181 128 12 chr15 12625205 12625316 -90869658 + ORR1D1 LTR MaLR 249 372 -2 2 681 437 158 0 43 chr15 12625507 12625594 -90869380 + MT2A LTR ERVL 1 74 -510 2 681 23 33 0 0 chr15 12625625 12625655 -90869319 + AT_rich Low_complexity Low_complexity 1 30 0 2 681 1296 224 99 14 chr15 12625735 12626029 -90868945 + MT2A LTR ERVL 68 386 -147 2 681 312 137 0 0 chr15 12626031 12626082 -90868892 + (TATATG)n Simple_repeat Simple_repeat 1 51 0 2 681 424 315 0 59 chr15 12626344 12626462 -90868512 + B1F SINE Alu 7 117 -32 2 681 531 200 21 0 chr15 12626462 12626557 -90868417 + B1_Mur1 SINE Alu 48 144 -5 2 681 180 0 0 0 chr15 12626570 12626590 -90868384 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 2 681 221 265 68 68 chr15 12626844 12626917 -90868057 - L2a LINE L2 -24 3402 3330 2 681 955 159 93 61 chr15 12627017 12627231 -90867743 - URR1A DNA MER1_type -2 224 4 2 681 243 336 104 22 chr15 12627306 12627440 -90867534 - B4A SINE B4 -146 146 2 2 681 1209 120 130 0 chr15 12628476 12628676 -90866298 + URR1A DNA MER1_type 1 226 0 2 681 233 254 0 0 chr15 12628725 12628784 -90866190 - L3b LINE CR1 -388 94 36 2 681 313 289 100 7 chr15 12629565 12629715 -90865259 + L1MC3 LINE L1 7529 7692 -93 2 681 277 288 14 14 chr15 12629721 12629795 -90865179 + ID4 SINE ID 6 79 -4 2 681 23 0 0 0 chr15 12630662 12630685 -90864289 + GC_rich Low_complexity Low_complexity 1 23 0 2 681 253 323 35 83 chr15 12630775 12630920 -90864054 + MLT1A0 LTR MaLR 1 138 -227 2 681 248 230 53 26 chr15 12631112 12631188 -90863786 + MLT1A0 LTR MaLR 318 395 -13 2 681 182 303 0 95 chr15 12631767 12631851 -90863123 + MIR SINE MIR 150 225 -37 2 681 4254 166 65 52 chr15 12632154 12633090 -90861884 - RMER17B LTR ERVK -6 952 5 2 681 348 24 0 0 chr15 12633208 12633249 -90861725 + (CATA)n Simple_repeat Simple_repeat 2 42 0 2 681 358 276 115 48 chr15 12633249 12633360 -90861614 - MER44A DNA MER2_type -108 231 109 2 681 231 36 0 0 chr15 12633360 12633388 -90861586 + (TCC)n Simple_repeat Simple_repeat 1 28 0 2 681 358 276 115 48 chr15 12633388 12633485 -90861489 - MER44A DNA MER2_type -231 108 9 2 681 468 0 0 0 chr15 12633524 12633576 -90861398 + (GA)n Simple_repeat Simple_repeat 2 53 0 2 681 382 186 86 20 chr15 12633962 12634079 -90860895 + MTC LTR MaLR 257 377 -44 2 681 2152 222 0 12 chr15 12634374 12634798 -90860176 + MTD LTR MaLR 1 419 0 2 681 421 214 46 46 chr15 12634832 12634940 -90860034 - PB1D10 SINE Alu 0 117 10 2 681 318 277 16 66 chr15 12634850 12634974 -90860000 - ID_B1 SINE B4 -105 187 66 2 681 296 98 33 0 chr15 12635062 12635123 -90859851 + (TCTG)n Simple_repeat Simple_repeat 2 64 0 2 681 324 217 17 0 chr15 12635229 12635289 -90859685 - RSINE1 SINE B4 -21 144 84 2 681 420 260 63 31 chr15 12635355 12635514 -90859460 - L1ME1 LINE L1 -235 5944 5781 2 681 919 116 68 2 chr15 12635727 12635893 -90859081 + B1_Mus1 SINE Alu 32 311 0 2 681 438 271 7 72 chr15 12636260 12636399 -90858575 + RMER10B LTR ERVL 269 398 0 2 681 739 304 79 55 chr15 12637240 12637570 -90857404 - MLT1A LTR MaLR -3 371 34 2 681 1372 85 21 0 chr15 12637605 12637793 -90857181 + B2_Mm2 SINE B2 3 194 -1 2 681 198 71 0 0 chr15 12638470 12638498 -90856476 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 2 681 345 100 0 0 chr15 12638502 12638552 -90856422 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 681 327 250 13 0 chr15 12638924 12639000 -90855974 + MER5A1 DNA MER1_type 86 162 -4 2 681 261 367 0 84 chr15 12639153 12639260 -90855714 + B1F SINE Alu 6 103 -46 2 681 1185 174 190 50 chr15 12639262 12639424 -90855550 + ORR1D1 LTR MaLR 8 165 -209 2 681 426 20 0 0 chr15 12639424 12639475 -90855499 + (TC)n Simple_repeat Simple_repeat 1 51 0 2 681 1185 174 190 50 chr15 12639475 12639633 -90855341 + ORR1D1 LTR MaLR 166 372 -2 2 681 766 103 154 0 chr15 12640818 12640935 -90854039 + B1_Mus1 SINE Alu 5 139 -9 2 681 207 0 0 0 chr15 12640935 12640958 -90854016 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 681 384 22 0 0 chr15 12641010 12641055 -90853919 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 681 216 0 0 0 chr15 12641655 12641679 -90853295 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 681 925 285 62 0 chr15 12641714 12641974 -90853000 - B4 SINE B4 -12 280 5 2 681 232 328 232 0 chr15 12642256 12642381 -90852593 - MER20 DNA MER1_type -57 162 9 2 681 1838 150 96 28 chr15 12645115 12645471 -90849503 + ORR1B1 LTR MaLR 1 380 -14 2 681 260 210 98 12 chr15 12645730 12645812 -90849162 + MLT1J LTR MaLR 71 159 -353 2 681 802 250 99 16 chr15 12646230 12646482 -90848492 - B4A SINE B4 -18 274 2 2 681 201 293 35 0 chr15 12646571 12646629 -90848345 + (CATG)n Simple_repeat Simple_repeat 1 60 0 2 681 585 204 263 0 chr15 12647476 12647628 -90847346 + URR1B DNA MER1_type 1 192 -33 2 681 535 318 96 38 chr15 12647626 12647940 -90847034 + MLT1A0 LTR MaLR 30 361 -4 2 681 256 218 164 82 chr15 12647977 12648087 -90846887 - PB1D7 SINE Alu -1 119 1 2 681 346 274 36 0 chr15 12648196 12648280 -90846694 - ID_B1 SINE B4 -2 222 136 2 681 414 0 0 0 chr15 12648432 12648478 -90846496 + (CAGA)n Simple_repeat Simple_repeat 2 47 0 2 681 201 274 0 0 chr15 12649080 12649142 -90845832 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 681 414 309 9 0 chr15 12650478 12650588 -90844386 + PB1D10 SINE Alu 1 111 -6 3 681 406 296 8 39 chr15 12651347 12651477 -90843497 - B1F2 SINE Alu -23 126 1 3 681 510 339 87 57 chr15 12651879 12652245 -90842729 - L3 LINE CR1 -655 3834 3458 3 681 430 246 35 43 chr15 12652335 12652450 -90842524 + PB1D10 SINE Alu 2 115 -2 3 681 955 161 200 0 chr15 12652819 12652999 -90841975 + B3 SINE B2 1 216 0 3 681 276 30 0 0 chr15 12653017 12653050 -90841924 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 3 681 1094 247 0 61 chr15 12653260 12653540 -90841434 + Lx6 LINE L1 7187 7449 -11 3 681 699 75 0 0 chr15 12654050 12654144 -90840830 + (GAAA)n Simple_repeat Simple_repeat 2 95 0 3 681 218 217 0 0 chr15 12654393 12654439 -90840535 + A-rich Low_complexity Low_complexity 1 46 0 3 681 404 279 107 29 chr15 12654469 12654609 -90840365 + MER5B DNA MER1_type 3 153 -25 3 681 544 341 165 37 chr15 12654609 12655251 -90839723 - L2a LINE L2 -2 3424 2701 3 681 238 277 107 81 chr15 12655254 12655333 -90839641 + MT2B2 LTR ERVL 89 171 -413 3 681 352 171 161 58 chr15 12655333 12655420 -90839554 + B1_Mm SINE Alu 1 96 -51 3 681 438 197 0 25 chr15 12655420 12655540 -90839434 + GA-rich Low_complexity Low_complexity 1 117 0 3 681 688 291 22 22 chr15 12655552 12655735 -90839239 + ID_B1 SINE B4 2 184 -40 3 681 221 369 78 48 chr15 12655928 12656221 -90838753 - L2a LINE L2 -1156 2263 1962 3 681 499 287 31 25 chr15 12656712 12656873 -90838101 - RSINE1 SINE B4 -1 164 3 3 681 1069 239 24 0 chr15 12657065 12657278 -90837696 - B4A SINE B4 -74 218 1 3 681 506 205 50 25 chr15 12657343 12657463 -90837511 - ID_B1 SINE B4 -4 220 98 3 681 24 0 0 0 chr15 12658077 12658101 -90836873 + AT_rich Low_complexity Low_complexity 1 24 0 3 681 439 279 18 0 chr15 12658667 12658778 -90836196 + PB1 SINE Alu 1 113 -14 3 681 632 145 8 0 chr15 12658780 12658897 -90836077 + GA-rich Low_complexity Low_complexity 3 120 0 3 681 197 259 181 24 chr15 12659693 12659776 -90835198 + MIRm SINE MIR 35 130 -146 3 681 268 300 110 0 chr15 12659845 12659945 -90835029 - L2a LINE L2 -43 3383 3273 3 681 200 281 92 15 chr15 12660165 12660230 -90834744 - L2a LINE L2 -557 2862 2793 3 681 700 216 15 15 chr15 12660233 12660369 -90834605 - B3 SINE B2 -3 213 78 3 681 722 299 13 71 chr15 12660379 12660617 -90834357 + MT2A LTR ERVL 234 457 -76 3 681 456 104 0 0 chr15 12660617 12660684 -90834290 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 681 528 279 69 17 chr15 12660735 12660910 -90834064 + MLT1C LTR MaLR 270 453 -14 3 681 1189 114 38 0 chr15 12661938 12662122 -90832852 - B2_Mm2 SINE B2 -3 192 2 3 681 282 29 0 0 chr15 12663198 12663233 -90831741 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 681 1200 35 7 0 chr15 12664425 12664567 -90830407 + B1_Mm SINE Alu 1 143 -4 3 681 339 85 0 0 chr15 12664569 12664616 -90830358 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 3 681 1140 122 31 26 chr15 12664731 12664924 -90830050 + B2_Mm2 SINE B2 1 194 -1 3 681 1304 170 4 43 chr15 12665615 12665849 -90829125 - URR1B DNA MER1_type 0 225 1 3 681 318 167 28 0 chr15 12666576 12666684 -90828290 + (TG)n Simple_repeat Simple_repeat 2 112 0 3 681 326 257 9 9 chr15 12666687 12666818 -90828156 + (TG)n Simple_repeat Simple_repeat 1 131 0 3 681 405 0 0 0 chr15 12666818 12666863 -90828111 + (TC)n Simple_repeat Simple_repeat 1 45 0 3 681 326 257 9 9 chr15 12666863 12666874 -90828100 + (TG)n Simple_repeat Simple_repeat 1 11 0 3 681 507 263 59 17 chr15 12666973 12667128 -90827846 + RSINE1 SINE B4 3 164 -1 3 681 306 0 0 0 chr15 12667152 12667186 -90827788 + (GA)n Simple_repeat Simple_repeat 2 35 0 3 681 201 304 133 42 chr15 12667823 12667943 -90827031 + L2b LINE L2 3244 3374 -1 3 681 249 284 0 13 chr15 12669424 12669499 -90825475 + (CCG)n Simple_repeat Simple_repeat 1 74 0 3 681 21 36 0 0 chr15 12669580 12669608 -90825366 + GC_rich Low_complexity Low_complexity 1 28 0 3 681 460 212 62 62 chr15 12669909 12670070 -90824904 - MamRep488 DNA hAT -5 214 54 3 681 207 0 0 0 chr15 12670398 12670421 -90824553 + (T)n Simple_repeat Simple_repeat 1 23 0 3 681 339 252 144 86 chr15 12671611 12671867 -90823107 + B4 SINE B4 4 274 -18 3 681 321 26 0 0 chr15 12671879 12671917 -90823057 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 681 473 0 18 0 chr15 12671917 12671973 -90823001 + (GA)n Simple_repeat Simple_repeat 2 59 0 3 681 2283 113 163 0 chr15 12672428 12672783 -90822191 + MTC LTR MaLR 1 413 -8 3 681 240 288 61 0 chr15 12674008 12674074 -90820900 - PB1D10 SINE Alu 0 117 48 3 681 446 287 119 7 chr15 12674032 12674183 -90820791 - ID_B1 SINE B4 -54 170 3 3 681 1135 82 7 0 chr15 12675115 12675261 -90819713 + B1_Mus1 SINE Alu 2 148 0 3 681 1902 151 41 106 chr15 12675282 12675697 -90819277 + RMER10B LTR ERVL 11 398 0 3 681 1606 221 58 14 chr15 12675909 12676272 -90818702 - MTEb LTR MaLR 0 379 1 3 681 1525 296 122 33 chr15 12676446 12677060 -90817914 + Lx8 LINE L1 6476 7144 -329 3 681 551 125 44 43 chr15 12677071 12677205 -90817769 + ORR1A4 LTR MaLR 1 156 -238 3 681 2089 106 53 0 chr15 12677202 12677505 -90817469 - ORR1A2 LTR MaLR -8 319 1 3 681 262 254 0 45 chr15 12677506 12677572 -90817402 + ORR1A4 LTR MaLR 146 208 -186 3 681 877 86 10 10 chr15 12677803 12677945 -90817029 - B2_Mm2 SINE B2 -56 137 1 3 681 285 29 0 0 chr15 12678294 12678328 -90816646 + (TATG)n Simple_repeat Simple_repeat 3 36 0 3 681 612 0 0 0 chr15 12678566 12678634 -90816340 + (TTTC)n Simple_repeat Simple_repeat 2 69 0 3 681 2649 240 78 11 chr15 12678634 12679278 -90815696 - Lx5 LINE L1 -19 7031 6360 3 681 1157 185 229 23 chr15 12680829 12681139 -90813835 - ORR1D1 LTR MaLR 0 374 1 3 681 385 339 86 89 chr15 12681241 12681578 -90813396 + L2c LINE L2 3048 3383 -4 3 681 180 0 0 0 chr15 12681630 12681650 -90813324 + (CA)n Simple_repeat Simple_repeat 2 21 0 3 681 397 344 106 91 chr15 12681948 12682236 -90812738 + LTR33 LTR ERVL 16 291 -224 3 681 304 252 16 98 chr15 12682236 12682298 -90812676 - PB1D10 SINE Alu 0 117 64 3 681 1131 94 0 0 chr15 12682298 12682478 -90812496 + (TCC)n Simple_repeat Simple_repeat 1 180 0 3 681 304 252 16 98 chr15 12682478 12682538 -90812436 - PB1D10 SINE Alu -54 63 5 3 681 397 344 106 91 chr15 12682538 12682742 -90812232 + LTR33 LTR ERVL 292 514 -1 3 681 191 61 30 0 chr15 12683505 12683538 -90811436 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 3 681 399 289 39 39 chr15 12683552 12683707 -90811267 + RSINE1 SINE B4 5 159 -6 3 681 215 206 139 149 chr15 12683707 12683746 -90811228 + B2_Mm2 SINE B2 4 195 0 3 681 229 148 36 36 chr15 12683749 12683805 -90811169 + A-rich Low_complexity Low_complexity 2 57 0 3 681 451 284 23 16 chr15 12683865 12684028 -90810946 + MIR SINE MIR 5 168 -100 3 681 1260 192 5 0 chr15 12684033 12684252 -90810722 + MTC LTR MaLR 3 222 -199 3 681 1418 161 19 59 chr15 12684333 12684603 -90810371 + MTC LTR MaLR 145 403 -18 3 681 574 230 94 88 chr15 12684653 12684834 -90810140 + B3A SINE B2 1 182 -16 3 681 390 279 0 0 chr15 12684834 12684992 -90809982 + (CA)n Simple_repeat Simple_repeat 1 158 0 3 681 259 282 0 14 chr15 12685850 12685922 -90809052 + (TG)n Simple_repeat Simple_repeat 1 71 0 3 681 356 247 6 25 chr15 12685926 12686088 -90808886 + (TATG)n Simple_repeat Simple_repeat 4 162 0 3 681 313 238 138 35 chr15 12686160 12686221 -90808753 - B4A SINE B4 -4 288 230 3 681 417 39 0 0 chr15 12686221 12686272 -90808702 + (TC)n Simple_repeat Simple_repeat 1 51 0 3 681 313 238 138 35 chr15 12686272 12686297 -90808677 - B4A SINE B4 -63 229 193 3 681 1511 224 107 66 chr15 12687247 12687306 -90807668 - MTD LTR MaLR -9 410 352 3 681 243 0 0 0 chr15 12687306 12687333 -90807641 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 3 681 1511 224 107 66 chr15 12687333 12687665 -90807309 - MTD LTR MaLR -68 351 5 3 681 1237 101 21 26 chr15 12687903 12688096 -90806878 - B2_Mm2 SINE B2 -3 192 1 3 681 621 318 142 79 chr15 12688523 12688841 -90806133 + LTR16A LTR ERVL 94 431 -20 3 681 228 283 17 0 chr15 12688875 12688935 -90806039 - PB1D9 SINE Alu -7 113 53 3 681 390 224 0 0 chr15 12689231 12689378 -90805596 + (CA)n Simple_repeat Simple_repeat 1 147 0 3 681 484 214 0 33 chr15 12689398 12689582 -90805392 + (CA)n Simple_repeat Simple_repeat 2 179 0 3 681 279 282 0 0 chr15 12689605 12689754 -90805220 + (CA)n Simple_repeat Simple_repeat 1 149 0 3 681 204 40 0 0 chr15 12691316 12691341 -90803633 + (TC)n Simple_repeat Simple_repeat 2 26 0 3 681 204 111 0 0 chr15 12691341 12691376 -90803598 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 681 672 271 65 36 chr15 12691401 12691680 -90803294 - B4A SINE B4 -4 288 2 3 681 531 0 0 0 chr15 12692762 12692821 -90802153 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 681 221 278 69 40 chr15 12693079 12693180 -90801794 + MIRc SINE MIR 89 192 -76 3 681 542 252 92 0 chr15 12694411 12694542 -90800432 - B1F1 SINE Alu -2 147 5 3 681 183 42 0 0 chr15 12695286 12695310 -90799664 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 3 681 1541 58 5 0 chr15 12695471 12695660 -90799314 - B2_Mm2 SINE B2 -3 192 3 3 681 1769 114 70 27 chr15 12695688 12695986 -90798988 + MTC LTR MaLR 2 312 -109 3 681 220 387 13 0 chr15 12695963 12696038 -90798936 - ID_B1 SINE B4 -67 157 82 3 681 1187 84 6 0 chr15 12696197 12696375 -90798599 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 681 574 254 69 0 chr15 12696381 12696511 -90798463 - RSINE1 SINE B4 -25 140 2 3 681 579 29 0 0 chr15 12696539 12696608 -90798366 + (TC)n Simple_repeat Simple_repeat 2 70 0 3 681 227 274 27 14 chr15 12696608 12696682 -90798292 + (TATG)n Simple_repeat Simple_repeat 3 77 0 3 681 216 0 0 0 chr15 12696693 12696717 -90798257 + (T)n Simple_repeat Simple_repeat 1 24 0 3 681 21 0 0 0 chr15 12696845 12696866 -90798108 + AT_rich Low_complexity Low_complexity 1 21 0 3 681 1581 291 59 29 chr15 12697465 12698062 -90796912 + Lx8 LINE L1 6858 7472 -1 4 681 663 259 36 6 chr15 12698270 12698437 -90796537 - Lx8 LINE L1 -129 7344 7173 4 681 24 0 0 0 chr15 12698605 12698629 -90796345 + AT_rich Low_complexity Low_complexity 1 24 0 4 681 189 333 88 25 chr15 12698743 12698823 -90796151 - MIRm SINE MIR -103 173 89 4 681 207 0 0 0 chr15 12698956 12698979 -90795995 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 681 318 225 45 26 chr15 12699310 12699407 -90795567 + PB1D10 SINE Alu 46 149 0 4 681 316 294 35 31 chr15 12700275 12700404 -90794570 + MER3 DNA MER1_type 5 134 -75 4 681 219 356 14 0 chr15 12700408 12700481 -90794493 - ID SINE ID -149 75 2 4 681 332 284 0 40 chr15 12700552 12700651 -90794323 + PB1D10 SINE Alu 3 97 -20 4 681 220 286 40 20 chr15 12700818 12700918 -90794056 - MER5B DNA MER1_type -71 107 6 4 681 351 299 47 0 chr15 12700931 12701038 -90793936 + MER102b DNA MER1_type 2 113 -228 4 681 312 254 0 0 chr15 12701477 12701540 -90793434 + Lx5 LINE L1 6533 6595 -455 4 681 733 247 36 6 chr15 12701780 12701947 -90793027 - Lx8 LINE L1 -129 7344 7173 4 681 2110 227 68 13 chr15 12702053 12702521 -90792453 + Lx6 LINE L1 6965 7458 -2 4 681 1103 245 7 94 chr15 12702635 12702835 -90792139 - B4 SINE B4 0 292 102 4 681 1066 218 124 124 chr15 12702835 12703213 -90791761 - MTE2a LTR MaLR 0 379 2 4 681 1103 245 7 94 chr15 12703213 12703309 -90791665 - B4 SINE B4 -191 101 22 4 681 340 332 96 39 chr15 12704478 12704792 -90790182 + LTR33 LTR ERVL 85 413 -102 4 681 225 384 19 70 chr15 12704961 12705118 -90789856 + B1_Mur3 SINE Alu 1 149 0 4 681 354 266 26 22 chr15 12705176 12705302 -90789672 - B3A SINE B2 -63 132 8 4 681 775 179 0 48 chr15 12705349 12705496 -90789478 - B1_Mus2 SINE Alu -5 142 3 4 681 352 273 61 128 chr15 12705496 12705510 -90789464 - B4A SINE B4 -69 220 71 4 681 2140 200 103 31 chr15 12705521 12706033 -90788941 + RMER15 LTR ERVL 27 575 0 4 681 1000 313 69 61 chr15 12706033 12706523 -90788451 + RMER15-int LTR ERVL 1 494 -4505 4 681 2070 125 73 9 chr15 12706593 12706923 -90788051 + ORR1B2 LTR MaLR 9 359 -8 4 681 307 262 8 47 chr15 12706936 12707064 -90787910 + RMER15-int LTR ERVL 665 787 -4212 4 681 687 344 18 33 chr15 12707110 12707441 -90787533 + RMER15-int LTR ERVL 1284 1609 -3390 4 681 23 33 0 0 chr15 12707588 12707618 -90787356 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 1510 172 18 21 chr15 12707773 12708053 -90786921 - MTC LTR MaLR -142 279 1 4 681 1285 284 11 17 chr15 12708225 12708576 -90786398 + RMER15-int LTR ERVL 2090 2438 -2561 4 681 1469 318 64 22 chr15 12708610 12709202 -90785772 + RMER15-int LTR ERVL 4163 4779 -220 4 681 5771 157 48 7 chr15 12709245 12710303 -90784671 - Lx2B LINE L1 -87 6913 5857 4 681 1675 307 95 28 chr15 12710814 12711632 -90783342 + Lx8 LINE L1 6226 7098 -375 4 681 368 236 30 6 chr15 12711927 12712093 -90782881 + G-rich Low_complexity Low_complexity 3 172 0 4 681 436 323 129 55 chr15 12712183 12712547 -90782427 + L1MEf LINE L1 1592 1982 -4218 4 681 440 350 131 20 chr15 12712860 12713359 -90781615 - MLT1A-int LTR MaLR -85 1324 771 4 681 203 122 20 0 chr15 12713395 12713444 -90781530 + (CAAA)n Simple_repeat Simple_repeat 1 50 0 4 681 1164 74 0 0 chr15 12713461 12713609 -90781365 + B1_Mus1 SINE Alu 1 148 0 4 681 225 0 0 0 chr15 12713731 12713756 -90781218 + (TC)n Simple_repeat Simple_repeat 2 26 0 4 681 930 105 17 17 chr15 12713756 12713931 -90781043 + (TCTCC)n Simple_repeat Simple_repeat 2 176 0 4 85 540 100 0 0 chr15 12713934 12714014 -90780960 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 4 682 271 284 49 0 chr15 12714081 12714162 -90780812 - B1F1 SINE Alu -63 86 2 4 682 563 338 166 3 chr15 12714162 12714485 -90780489 - MLT1A-int LTR MaLR -729 680 305 4 682 512 330 63 107 chr15 12714524 12714907 -90780067 - MLT1A LTR MaLR -1 373 8 4 682 320 313 65 39 chr15 12714936 12715089 -90779885 - MLT1H2 LTR MaLR 0 489 333 4 682 1002 288 97 7 chr15 12715069 12715359 -90779615 - MTEa LTR MaLR -6 373 58 4 682 360 284 45 14 chr15 12715387 12715530 -90779444 - MLT1H2 LTR MaLR -256 323 128 4 682 361 256 217 25 chr15 12715868 12715988 -90778986 - B1_Mus1 SINE Alu 0 148 6 4 682 231 228 70 0 chr15 12715992 12716049 -90778925 + MER34 LTR ERV1 385 445 -97 4 682 232 296 26 53 chr15 12716052 12716166 -90778808 - MLT1H LTR MaLR 0 408 298 4 682 302 254 73 17 chr15 12716365 12716475 -90778499 - MLT1H LTR MaLR -255 110 5 4 682 231 326 73 29 chr15 12716581 12716717 -90778257 - MLT1H-int LTR MaLR -1183 226 85 4 682 809 234 8 133 chr15 12716762 12717018 -90777956 + URR1B DNA MER1_type 1 224 -1 4 682 483 314 178 40 chr15 12717055 12717403 -90777571 - MLT1H LTR MaLR -31 518 123 4 682 361 223 43 26 chr15 12717424 12717539 -90777435 - PB1D10 SINE Alu 0 117 1 4 682 342 333 43 11 chr15 12717592 12717780 -90777194 + L1M5 LINE L1 4507 4700 -1446 4 682 317 270 158 0 chr15 12717878 12718030 -90776944 - L1MC3 LINE L1 0 7785 7610 4 682 294 184 0 0 chr15 12718057 12718106 -90776868 - ID4 SINE ID -33 50 2 4 682 331 309 88 26 chr15 12718151 12718264 -90776710 + PB1D7 SINE Alu 1 120 0 4 682 231 253 35 24 chr15 12718290 12718375 -90776599 + HAL1 LINE L1 131 216 -2291 4 682 1055 117 5 91 chr15 12718375 12718573 -90776401 + B2_Mm1t SINE B2 1 181 -12 4 682 348 139 272 37 chr15 12718585 12718721 -90776253 + B2_Mm2 SINE B2 28 195 0 4 682 212 255 21 0 chr15 12718878 12718925 -90776049 + B1F SINE Alu 6 53 -96 4 682 238 172 31 15 chr15 12718971 12719036 -90775938 + GA-rich Low_complexity Low_complexity 3 68 0 4 682 581 275 56 0 chr15 12719788 12719930 -90775044 - RSINE1 SINE B4 -1 164 15 4 682 227 279 10 41 chr15 12719994 12720091 -90774883 + HAL1 LINE L1 937 1030 -1477 4 682 756 230 40 7 chr15 12720113 12720262 -90774712 + B3A SINE B2 4 157 -41 4 682 2212 123 3 0 chr15 12720284 12720610 -90774364 + ORR1A2 LTR MaLR 1 327 0 4 682 336 293 93 76 chr15 12720641 12720697 -90774277 + L1M4b LINE L1 2144 2207 -5127 4 682 1364 84 17 6 chr15 12720697 12720877 -90774097 + B2_Mm2 SINE B2 2 183 -12 4 682 336 293 93 76 chr15 12720877 12721045 -90773929 + L1M4b LINE L1 2208 2371 -4963 4 682 298 222 0 16 chr15 12721155 12721228 -90773746 - ID4 SINE ID -59 93 22 4 682 333 291 59 8 chr15 12721934 12722052 -90772922 - LTR48 LTR ERV1 -85 702 579 4 682 400 336 31 0 chr15 12722354 12722482 -90772492 + ID_B1 SINE B4 92 223 -1 4 682 240 35 0 0 chr15 12722490 12722519 -90772455 + (CACAA)n Simple_repeat Simple_repeat 2 30 0 4 682 555 216 0 67 chr15 12722870 12722989 -90771985 - ID_B1 SINE B4 -31 193 83 4 682 236 261 56 42 chr15 12724565 12724637 -90770337 - L2a LINE L2 -1 3425 3353 4 682 264 192 231 0 chr15 12724752 12724830 -90770144 + B1F1 SINE Alu 9 104 -45 4 682 271 258 142 55 chr15 12724837 12724964 -90770010 + B1F SINE Alu 10 147 -2 4 682 299 212 82 35 chr15 12724967 12725058 -90769916 + ID4 SINE ID 5 92 -60 4 682 981 17 0 0 chr15 12725154 12725269 -90769705 + (CA)n Simple_repeat Simple_repeat 1 115 0 4 682 866 192 108 67 chr15 12725567 12725968 -90769006 - LTR48B LTR ERV1 -183 604 1 4 682 487 283 28 48 chr15 12725968 12726113 -90768861 - MLT1D LTR MaLR -18 487 346 4 682 892 152 7 0 chr15 12726709 12726854 -90768120 + B1_Mus1 SINE Alu 2 147 -1 4 682 283 131 23 23 chr15 12726866 12726952 -90768022 + A-rich Low_complexity Low_complexity 5 90 0 4 682 315 215 37 37 chr15 12727019 12727101 -90767873 - PB1D10 SINE Alu 0 117 36 4 682 360 279 25 75 chr15 12727045 12727165 -90767809 - ID_B1 SINE B4 -55 169 56 4 682 1207 48 7 0 chr15 12727350 12727497 -90767477 + B1_Mus1 SINE Alu 1 148 0 4 682 203 256 0 0 chr15 12728112 12728151 -90766823 + polypyrimidine Low_complexity Low_complexity 1 39 0 4 682 253 222 26 204 chr15 12728151 12728264 -90766710 - PB1D10 SINE Alu -3 114 22 4 682 222 229 169 67 chr15 12728290 12728379 -90766595 + PB1D10 SINE Alu 1 98 -19 4 682 211 203 29 0 chr15 12728700 12728769 -90766205 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 682 260 282 0 0 chr15 12728784 12728862 -90766112 + (TG)n Simple_repeat Simple_repeat 1 78 0 4 682 719 95 69 0 chr15 12728864 12728980 -90765994 - ORR1D1 LTR MaLR -250 124 1 4 682 1114 184 88 40 chr15 12728980 12729207 -90765767 - ORR1D1-int LTR MaLR 0 1370 1133 4 682 2152 202 50 13 chr15 12729116 12729573 -90765401 + ORR1D-int LTR MaLR 591 1064 -306 4 682 343 353 138 21 chr15 12729571 12729759 -90765215 - B4A SINE B4 -79 213 4 4 682 483 18 0 0 chr15 12729771 12729827 -90765147 + (TATG)n Simple_repeat Simple_repeat 1 56 0 4 682 249 98 0 0 chr15 12729899 12729940 -90765034 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 682 500 246 242 14 chr15 12729943 12730166 -90764808 - B4 SINE B4 -18 274 1 4 682 394 319 38 3 chr15 12730461 12730605 -90764369 - ID_B1 SINE B4 0 224 83 4 682 318 50 0 0 chr15 12730724 12730764 -90764210 + (TCCC)n Simple_repeat Simple_repeat 3 42 0 4 682 216 186 23 0 chr15 12730778 12730821 -90764153 - PB1 SINE Alu -11 116 73 4 682 1066 110 12 0 chr15 12730883 12731056 -90763918 + (TC)n Simple_repeat Simple_repeat 2 176 0 4 682 195 42 0 0 chr15 12731107 12731131 -90763843 + (GGGA)n Simple_repeat Simple_repeat 1 24 0 4 682 387 331 40 11 chr15 12731437 12731614 -90763360 + MIR3 SINE MIR 23 204 -4 4 682 4867 142 46 38 chr15 12731658 12732607 -90762367 - RMER17B LTR ERVK -1 957 1 4 682 1073 302 119 12 chr15 12732630 12733292 -90761682 - L1M2 LINE L1 -864 5436 4693 4 682 220 266 15 45 chr15 12733298 12733365 -90761609 - RSINE1 SINE B4 -97 68 4 4 682 501 208 35 0 chr15 12733365 12733527 -90761447 - L1M2 LINE L1 -1254 4632 4487 4 682 637 214 185 0 chr15 12733534 12733707 -90761267 - B3 SINE B2 -11 205 1 4 682 375 243 18 36 chr15 12733711 12733822 -90761152 - PB1D10 SINE Alu 0 117 9 4 682 237 291 28 37 chr15 12733742 12733849 -90761125 - ID_B1 SINE B4 -57 167 62 4 682 695 86 3 0 chr15 12733952 12734054 -90760920 + B2_Mm2 SINE B2 4 108 -85 4 682 229 291 36 0 chr15 12734457 12734512 -90760462 + ID_B1 SINE B4 90 146 -78 4 682 2872 46 0 23 chr15 12735629 12735983 -90758991 - ORR1A0 LTR MaLR 0 346 1 4 682 450 250 42 21 chr15 12736362 12736505 -90758469 + Lx7 LINE L1 6302 6447 -1249 4 682 789 270 148 52 chr15 12736604 12737062 -90757912 + RMER20B LTR ERVK 90 591 -36 5 682 2211 268 124 23 chr15 12737070 12737911 -90757063 + Lx7 LINE L1 6441 7366 -330 4 682 261 290 0 0 chr15 12737901 12737970 -90757004 + RMER1C Other Other 1198 1266 -76 5 682 408 209 63 28 chr15 12738023 12738166 -90756808 + B3 SINE B2 1 213 -3 5 682 542 246 144 17 chr15 12739094 12739268 -90755706 - B3A SINE B2 0 198 3 5 682 926 135 0 26 chr15 12739386 12739538 -90755436 + B1_Mus1 SINE Alu 1 148 0 5 682 221 161 20 79 chr15 12739547 12739559 -90755415 + A-rich Low_complexity Low_complexity 1 10 0 5 682 1208 55 0 20 chr15 12739559 12739708 -90755266 + B1_Mus2 SINE Alu 2 147 0 5 682 221 161 20 79 chr15 12739708 12739796 -90755178 + A-rich Low_complexity Low_complexity 11 95 0 5 682 242 104 57 43 chr15 12739710 12739780 -90755194 + (CAAAC)n Simple_repeat Simple_repeat 1 71 0 5 682 291 354 46 8 chr15 12740825 12740956 -90754018 - B1F2 SINE Alu -10 139 4 5 682 286 190 35 0 chr15 12740956 12741011 -90753963 - B4A SINE B4 -231 61 5 5 682 763 282 21 31 chr15 12741094 12741288 -90753686 - B3A SINE B2 0 198 7 5 682 252 143 0 0 chr15 12741288 12741330 -90753644 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 682 757 348 85 7 chr15 12741371 12741678 -90753296 - MLT1D LTR MaLR -157 348 18 5 682 239 295 39 0 chr15 12741859 12741937 -90753037 + ID4_ SINE ID 2 82 -1 5 682 303 326 51 68 chr15 12741937 12742085 -90752889 + B4A SINE B4 2 218 -74 5 682 290 258 39 15 chr15 12742095 12742184 -90752790 + B4 SINE B4 2 93 -72 5 682 1125 51 43 0 chr15 12742322 12742460 -90752514 - B1_Mus1 SINE Alu 0 148 5 5 682 803 248 44 15 chr15 12742510 12742715 -90752259 - B3 SINE B2 -4 212 2 5 682 586 188 156 0 chr15 12743347 12743475 -90751499 + B1_Mur1 SINE Alu 2 149 0 5 682 282 56 0 0 chr15 12743476 12743512 -90751462 + (A)n Simple_repeat Simple_repeat 1 36 0 5 682 429 134 30 0 chr15 12744111 12744178 -90750796 + MTC LTR MaLR 1 69 -352 5 682 929 129 109 23 chr15 12744175 12744336 -90750638 + MTC LTR MaLR 209 384 -37 5 682 2269 196 132 84 chr15 12744336 12745137 -90749837 + MTC-int LTR MaLR 4 885 -213 5 682 719 280 119 5 chr15 12745308 12745509 -90749465 - B4A SINE B4 -67 225 2 5 682 295 239 217 0 chr15 12745943 12746035 -90748939 + PB1D10 SINE Alu 1 112 -5 5 682 288 268 134 0 chr15 12746999 12747081 -90747893 - PB1D10 SINE Alu -11 106 14 5 682 229 275 45 101 chr15 12748188 12748277 -90746697 + MLT1J LTR MaLR 81 164 -348 5 682 294 287 126 0 chr15 12748391 12748478 -90746496 + PB1D7 SINE Alu 1 98 -22 5 682 270 0 0 0 chr15 12748478 12748508 -90746466 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 682 274 237 126 21 chr15 12748508 12748537 -90746437 + B1F1 SINE Alu 99 126 -23 5 682 380 281 8 8 chr15 12748594 12748716 -90746258 - B3A SINE B2 -75 123 2 5 682 296 327 28 0 chr15 12748733 12748840 -90746134 - PB1 SINE Alu -2 125 16 5 682 394 262 253 12 chr15 12749028 12749198 -90745776 - ID_B1 SINE B4 -13 211 1 5 682 872 268 60 8 chr15 12749348 12749615 -90745359 - B4 SINE B4 -9 283 3 5 682 550 213 83 38 chr15 12749847 12749979 -90744995 + B1_Mur1 SINE Alu 12 149 0 5 682 284 269 30 0 chr15 12750004 12750071 -90744903 + B1_Mur3 SINE Alu 1 69 -80 5 682 180 250 71 0 chr15 12750458 12750514 -90744460 + L3 LINE CR1 3763 3822 -667 5 682 300 281 96 10 chr15 12750644 12750748 -90744226 - PB1D10 SINE Alu 0 117 5 5 682 495 271 6 127 chr15 12750672 12750845 -90744129 - ID_B1 SINE B4 -63 161 10 5 682 305 297 48 29 chr15 12750845 12750949 -90744025 - PB1D10 SINE Alu -11 106 1 5 682 414 314 187 25 chr15 12751442 12751726 -90743248 + Charlie1a DNA MER1_type 96 425 -1030 5 682 496 259 201 24 chr15 12751844 12752267 -90742707 + Charlie1a DNA MER1_type 934 1434 -21 5 682 271 278 144 0 chr15 12752259 12752349 -90742625 + ID_B1 SINE B4 76 178 -46 5 682 324 224 20 10 chr15 12752349 12752448 -90742526 + Lx4B LINE L1 6795 6894 -164 5 682 2931 71 2 22 chr15 12752448 12752852 -90742122 - MTA_Mm LTR MaLR 0 396 1 5 682 226 179 118 15 chr15 12752882 12752950 -90742024 + ORR1C2 LTR MaLR 1 75 -309 5 682 393 250 30 40 chr15 12752944 12753044 -90741930 - MTE2a LTR MaLR -276 103 5 5 682 425 207 46 0 chr15 12753044 12753141 -90741833 - B1F SINE Alu -13 104 4 5 682 243 0 0 0 chr15 12753566 12753593 -90741381 + (A)n Simple_repeat Simple_repeat 1 27 0 5 682 1101 59 0 0 chr15 12755232 12755368 -90739606 - B1_Mus1 SINE Alu -10 138 3 5 682 260 207 214 24 chr15 12756319 12756403 -90738571 - B1_Mur3 SINE Alu -22 127 28 5 682 306 0 0 0 chr15 12756410 12756444 -90738530 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 682 294 29 0 0 chr15 12756444 12756478 -90738496 + (GA)n Simple_repeat Simple_repeat 1 35 0 5 682 327 229 3 57 chr15 12757396 12757498 -90737476 - MT2C_Mm LTR ERVL 0 601 486 5 682 1348 111 0 46 chr15 12757498 12757716 -90737258 + ORR1A2 LTR MaLR 1 208 -119 5 682 1147 105 19 0 chr15 12757716 12757878 -90737096 - MERVL_2A-int LTR ERVL -529 5232 5068 5 682 622 146 122 128 chr15 12757880 12758076 -90736898 - RLTR47_MM LTR ERV1 0 532 338 5 682 642 231 59 159 chr15 12758095 12758376 -90736598 + MT2A LTR ERVL 2 253 -280 5 682 1285 97 40 6 chr15 12758376 12758576 -90736398 - MT2C_Mm LTR ERVL 0 533 305 5 682 319 322 0 22 chr15 12758630 12758722 -90736252 + MT2B LTR ERVL 168 257 -344 5 682 609 168 19 0 chr15 12758659 12758766 -90736208 + B1_Mur1 SINE Alu 40 148 -1 5 682 295 294 74 25 chr15 12759058 12759180 -90735794 - MLT1A LTR MaLR -114 260 133 5 682 808 179 137 173 chr15 12759199 12759470 -90735504 - ORR1D1 LTR MaLR -111 263 3 5 682 3034 29 0 0 chr15 12759968 12760313 -90734661 - ORR1A0 LTR MaLR -1 345 1 5 682 14518 49 2 1 chr15 12760313 12762104 -90732870 - ORR1A0-int LTR MaLR 0 1792 1 5 682 3099 17 3 0 chr15 12762104 12762449 -90732525 - ORR1A0 LTR MaLR 0 346 1 5 682 620 220 168 29 chr15 12762969 12763142 -90731832 - B4 SINE B4 -50 242 46 5 682 403 325 12 18 chr15 12763209 12763375 -90731599 + (CGTG)n Simple_repeat Simple_repeat 3 167 0 5 682 186 43 0 0 chr15 12763393 12763416 -90731558 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 682 387 0 0 0 chr15 12763453 12763496 -90731478 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 682 723 167 68 0 chr15 12764498 12764630 -90730344 - B1_Mus1 SINE Alu -5 143 3 5 682 22 0 0 0 chr15 12764641 12764663 -90730311 + AT_rich Low_complexity Low_complexity 1 22 0 5 682 26 30 0 0 chr15 12765126 12765159 -90729815 + AT_rich Low_complexity Low_complexity 1 33 0 5 682 469 265 108 30 chr15 12765199 12765366 -90729608 - MTD LTR MaLR -21 398 219 5 682 274 301 187 27 chr15 12767614 12767764 -90727210 + MIRb SINE MIR 87 260 -8 5 682 642 229 0 48 chr15 12767840 12767987 -90726987 + B1F SINE Alu 9 148 -1 5 682 1061 205 19 5 chr15 12768197 12768408 -90726566 + B3 SINE B2 2 215 -1 5 682 198 0 0 0 chr15 12768558 12768580 -90726394 + (T)n Simple_repeat Simple_repeat 1 22 0 5 682 246 246 105 0 chr15 12769664 12769721 -90725253 + U6 snRNA snRNA 38 100 -7 5 682 487 222 9 69 chr15 12770044 12770160 -90724814 + ID_B1 SINE B4 90 198 -26 5 682 32 43 0 0 chr15 12770160 12770206 -90724768 + AT_rich Low_complexity Low_complexity 1 46 0 5 682 325 187 25 51 chr15 12770430 12770509 -90724465 - PB1D9 SINE Alu -1 119 43 5 682 342 67 0 0 chr15 12770534 12770579 -90724395 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 682 357 333 40 7 chr15 12770595 12770746 -90724228 - RSINE1 SINE B4 -8 157 2 5 682 311 306 16 83 chr15 12770832 12770934 -90724040 - PB1D7 SINE Alu -7 113 16 5 682 1340 160 255 20 chr15 12770934 12771228 -90723746 - ORR1B2 LTR MaLR 0 367 5 5 682 311 306 16 83 chr15 12771228 12771246 -90723728 - PB1D7 SINE Alu -105 15 1 5 682 488 274 53 41 chr15 12771844 12772015 -90722959 - MER5A DNA MER1_type -16 173 1 5 682 541 243 79 0 chr15 12772319 12772471 -90722503 - MER20 DNA MER1_type -5 214 51 5 682 853 262 43 129 chr15 12772487 12772881 -90722093 - ORR1D2 LTR MaLR -10 360 1 5 682 1195 54 0 0 chr15 12773346 12773493 -90721481 + B1_Mus1 SINE Alu 2 148 0 5 682 417 355 92 46 chr15 12773699 12774075 -90720899 - Tigger5 DNA MER2_type -1 2405 2107 5 682 393 277 142 0 chr15 12774110 12774251 -90720723 - RSINE1 SINE B4 -4 161 1 5 682 514 290 82 15 chr15 12774618 12774870 -90720104 - MLT1D LTR MaLR -8 619 325 5 682 320 200 238 0 chr15 12775053 12775133 -90719841 + B3 SINE B2 74 172 -44 5 682 1214 68 0 0 chr15 12775243 12775389 -90719585 + B1_Mus2 SINE Alu 2 147 0 5 682 448 281 25 8 chr15 12776376 12776498 -90718476 - B1F1 SINE Alu -4 145 22 5 682 471 287 148 22 chr15 12776851 12777168 -90717806 - L1MB2 LINE L1 0 6171 5815 5 682 236 53 0 26 chr15 12777171 12777210 -90717764 + (TTTTG)n Simple_repeat Simple_repeat 4 41 0 5 682 517 270 26 0 chr15 12777215 12777330 -90717644 - ID_B1 SINE B4 -2 222 105 5 682 807 46 0 0 chr15 12778576 12778685 -90716289 - B1_Mus2 SINE Alu -1 146 38 5 682 297 123 73 110 chr15 12778618 12778700 -90716274 - RLTR25B LTR ERVK -519 509 431 5 682 844 215 80 25 chr15 12778907 12779107 -90715867 - B3 SINE B2 -5 211 1 5 682 1342 89 26 16 chr15 12779229 12779422 -90715552 - B2_Mm2 SINE B2 0 195 1 5 682 239 241 34 67 chr15 12779593 12779682 -90715292 - L1MB8 LINE L1 -72 6106 6021 5 682 409 196 49 0 chr15 12780261 12780363 -90714611 - MER2 DNA MER2_type -112 233 127 5 682 467 303 129 21 chr15 12780436 12780669 -90714305 - B4 SINE B4 -2 290 33 5 682 180 0 0 0 chr15 12781083 12781103 -90713871 + (TG)n Simple_repeat Simple_repeat 2 21 0 6 682 461 373 46 19 chr15 12783721 12784087 -90710887 - ERVL-E-int LTR ERVL -2580 3087 2712 6 682 673 222 18 18 chr15 12785943 12786112 -90708862 - B1_Mur3 SINE Alu -1 310 11 6 682 632 325 112 20 chr15 12786439 12786788 -90708186 + LTR69 LTR ERVL 202 582 -6 6 682 1554 62 0 5 chr15 12786981 12787177 -90707797 - B2_Mm2 SINE B2 0 195 1 6 682 354 23 0 0 chr15 12787196 12787239 -90707735 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 6 682 1102 75 6 6 chr15 12787239 12787399 -90707575 - B2_Mm1a SINE B2 -33 160 1 6 682 451 206 28 0 chr15 12789237 12789344 -90705630 - B1F SINE Alu -31 118 9 6 682 384 260 72 20 chr15 12789944 12790097 -90704877 - L1MB8 LINE L1 -2 6176 6016 6 682 228 217 0 0 chr15 12790208 12790254 -90704720 - L1MB8 LINE L1 -314 5864 5819 6 682 360 196 24 41 chr15 12790370 12790405 -90704569 - L1MB8 LINE L1 -476 5827 5797 6 682 351 0 0 0 chr15 12790405 12790444 -90704530 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 682 360 158 35 35 chr15 12790444 12790510 -90704464 - L1MB8 LINE L1 -507 5796 5731 6 682 777 234 0 0 chr15 12790529 12790687 -90704287 + B3 SINE B2 3 160 -56 6 682 276 30 0 0 chr15 12790687 12790720 -90704254 + (TAAAA)n Simple_repeat Simple_repeat 5 37 0 6 682 25 31 0 0 chr15 12790762 12790794 -90704180 + AT_rich Low_complexity Low_complexity 1 32 0 6 682 253 281 132 0 chr15 12790801 12790915 -90704059 - L1MB8 LINE L1 -497 5681 5553 6 682 25 0 0 0 chr15 12792391 12792416 -90702558 + AT_rich Low_complexity Low_complexity 1 25 0 6 682 409 273 102 0 chr15 12792416 12792544 -90702430 - B1F SINE Alu -6 143 3 6 682 257 205 0 170 chr15 12794441 12794541 -90700433 + MT2B LTR ERVL 158 240 -361 6 682 552 223 13 86 chr15 12794457 12794609 -90700365 + B1_Mur1 SINE Alu 7 147 -2 6 682 273 155 0 0 chr15 12798743 12798801 -90696173 + C-rich Low_complexity Low_complexity 1 58 0 6 682 372 257 80 0 chr15 12800010 12800123 -90694851 - B3 SINE B2 -9 207 86 6 682 431 264 90 8 chr15 12800271 12800393 -90694581 - B1F SINE Alu -8 141 10 6 682 267 298 119 28 chr15 12800643 12800819 -90694155 - L1ME3A LINE L1 -105 6068 5877 6 682 1196 75 0 0 chr15 12801243 12801390 -90693584 - B1_Mus2 SINE Alu 0 147 1 6 682 222 62 0 0 chr15 12801407 12801439 -90693535 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 682 396 222 50 10 chr15 12801579 12801679 -90693295 - B1F SINE Alu -6 143 40 6 682 23 33 0 0 chr15 12801862 12801892 -90693082 + AT_rich Low_complexity Low_complexity 1 30 0 6 682 2100 50 0 11 chr15 12801972 12802234 -90692740 - L1_Mus1 LINE L1 0 6567 6309 6 682 1635 47 0 0 chr15 12803734 12803925 -90691049 - B2_Mm1a SINE B2 0 193 3 6 682 399 217 8 142 chr15 12804003 12804137 -90690837 - B1_Mur1 SINE Alu -33 116 1 6 682 268 277 191 0 chr15 12804675 12804769 -90690205 - B3A SINE B2 -58 140 29 6 682 266 319 49 14 chr15 12806479 12806622 -90688352 - B1F1 SINE Alu -1 148 1 6 682 825 247 92 97 chr15 12806973 12807354 -90687620 + MTE2a LTR MaLR 1 379 0 6 682 221 279 16 0 chr15 12807384 12807445 -90687529 - ID4 SINE ID -1 82 21 6 682 459 252 9 0 chr15 12807523 12807634 -90687340 - PB1D10 SINE Alu -5 112 1 6 682 347 236 53 26 chr15 12810201 12810314 -90684660 - PB1D10 SINE Alu -1 116 1 6 682 431 259 43 0 chr15 12810756 12810872 -90684102 + B3 SINE B2 90 210 -6 6 682 326 316 33 98 chr15 12813193 12813407 -90681567 - Lx8 LINE L1 -5 7468 7269 6 682 378 0 0 0 chr15 12815028 12815070 -90679904 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 682 216 217 53 80 chr15 12816121 12816196 -90678778 + ID4 SINE ID 2 74 -9 6 682 700 251 29 33 chr15 12816278 12816488 -90678486 - B3 SINE B2 -7 209 1 6 682 216 0 0 0 chr15 12816575 12816599 -90678375 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 682 3273 166 65 23 chr15 12816604 12817268 -90677706 - RLTR17 LTR ERVK 0 692 1 6 682 465 180 56 0 chr15 12818529 12818618 -90676356 + B1F SINE Alu 19 112 -37 6 682 285 75 0 0 chr15 12818652 12818692 -90676282 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 6 682 424 263 197 13 chr15 12818696 12818935 -90676039 + B4A SINE B4 4 286 -6 6 682 384 88 0 0 chr15 12818947 12819004 -90675970 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 682 396 0 0 0 chr15 12819134 12819178 -90675796 + (TGAG)n Simple_repeat Simple_repeat 3 46 0 6 682 395 291 122 33 chr15 12820307 12820791 -90674183 - L1MB7 LINE L1 0 6184 5585 6 682 321 118 0 0 chr15 12820860 12820911 -90674063 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 682 441 317 112 5 chr15 12820948 12821135 -90673839 - B4A SINE B4 -47 245 39 6 682 395 267 116 10 chr15 12821290 12821535 -90673439 - L1MB7 LINE L1 -791 5355 5077 6 682 364 135 100 7 chr15 12821814 12821904 -90673070 - L1MB7 LINE L1 -1354 4792 4681 6 682 1983 98 9 28 chr15 12821979 12822205 -90672769 - ORR1A3 LTR MaLR -8 318 97 6 682 4498 77 9 0 chr15 12822205 12822788 -90672186 - L1Md_T LINE L1 0 6582 5995 6 682 1983 98 9 28 chr15 12822788 12822885 -90672089 - ORR1A3 LTR MaLR -230 96 1 6 682 730 284 127 13 chr15 12822971 12823271 -90671703 + ORR1E LTR MaLR 1 334 -25 6 682 21 0 0 0 chr15 12823768 12823789 -90671185 + AT_rich Low_complexity Low_complexity 1 21 0 6 682 789 313 99 28 chr15 12823794 12824149 -90670825 - MTD LTR MaLR -32 387 8 6 682 675 164 6 136 chr15 12824310 12824479 -90670495 + B1_Mus1 SINE Alu 1 147 -1 6 682 1051 196 44 0 chr15 12824896 12825100 -90669874 - B3 SINE B2 -3 213 1 6 682 618 203 0 0 chr15 12826683 12826816 -90668158 + CT-rich Low_complexity Low_complexity 2 134 0 6 682 1232 54 0 0 chr15 12826817 12826964 -90668010 - B1_Mus2 SINE Alu 0 147 1 6 682 609 208 353 4 chr15 12827606 12827872 -90667102 - ORR1D1 LTR MaLR -14 360 2 6 682 333 68 0 0 chr15 12828448 12828492 -90666482 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 682 437 252 29 10 chr15 12828524 12828628 -90666346 - PB1D7 SINE Alu -13 107 2 6 682 414 0 0 0 chr15 12828668 12828714 -90666260 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 682 427 216 135 8 chr15 12828853 12828979 -90665995 - B1F SINE Alu -7 142 1 6 682 283 257 27 0 chr15 12829374 12829448 -90665526 - ID4_ SINE ID -4 79 4 6 682 1929 133 77 25 chr15 12830083 12830446 -90664528 - ORR1C2 LTR MaLR -2 382 1 6 682 388 263 44 25 chr15 12830662 12830822 -90664152 - RSINE1 SINE B4 0 165 3 6 682 738 69 0 0 chr15 12831340 12831441 -90663533 + (TG)n Simple_repeat Simple_repeat 2 102 0 6 682 603 271 14 0 chr15 12831975 12832119 -90662855 - B1F2 SINE Alu 0 149 4 6 682 255 324 18 18 chr15 12833097 12833207 -90661767 + MIRb SINE MIR 89 198 -70 6 682 226 135 94 19 chr15 12833617 12833670 -90661304 + L1Md_F2 LINE L1 6519 6575 -7 6 682 21 36 0 0 chr15 12834819 12834847 -90660127 + AT_rich Low_complexity Low_complexity 1 28 0 6 682 650 113 9 0 chr15 12835683 12835789 -90659185 + (CA)n Simple_repeat Simple_repeat 2 108 0 6 682 22 35 0 0 chr15 12837301 12837330 -90657644 + AT_rich Low_complexity Low_complexity 1 29 0 6 682 468 0 0 0 chr15 12838675 12838727 -90656247 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 682 558 221 16 0 chr15 12839763 12839885 -90655089 - B1_Mur1 SINE Alu -2 147 24 6 682 259 250 142 55 chr15 12840250 12840377 -90654597 + L2c LINE L2 3248 3385 -2 6 682 414 57 0 0 chr15 12841129 12841182 -90653792 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 682 1196 57 0 0 chr15 12841866 12842007 -90652967 + B1_Mus2 SINE Alu 2 142 -5 6 682 297 0 0 0 chr15 12842010 12842043 -90652931 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 6 682 351 0 0 0 chr15 12843292 12843331 -90651643 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 682 33 25 0 0 chr15 12844607 12844647 -90650327 + AT_rich Low_complexity Low_complexity 1 40 0 6 683 274 292 0 0 chr15 12846444 12846516 -90648458 - PB1D7 SINE Alu 0 120 49 6 683 362 322 51 111 chr15 12847733 12848103 -90646871 + L2 LINE L2 2241 2588 -831 6 683 256 288 0 27 chr15 12848286 12848361 -90646613 - ID4_ SINE ID -4 79 7 6 683 428 247 130 54 chr15 12852924 12853108 -90641866 + B3A SINE B2 1 198 0 6 683 25 31 0 0 chr15 12853425 12853457 -90641517 + AT_rich Low_complexity Low_complexity 1 32 0 6 683 362 315 78 16 chr15 12854090 12854219 -90640755 - ID_B1 SINE B4 -3 221 85 6 683 732 175 168 36 chr15 12855180 12855376 -90639598 + URR1A DNA MER1_type 5 226 0 6 683 251 282 51 0 chr15 12855560 12855638 -90639336 + B3A SINE B2 2 83 -115 6 683 434 198 0 50 chr15 12856325 12856426 -90638548 - B3 SINE B2 -120 96 1 6 683 365 168 142 0 chr15 12856811 12856924 -90638050 + B3A SINE B2 29 157 -41 6 683 21 0 0 0 chr15 12857342 12857363 -90637611 + AT_rich Low_complexity Low_complexity 1 21 0 6 683 539 264 13 13 chr15 12859715 12859865 -90635109 + ID_B1 SINE B4 75 224 0 6 683 482 141 26 65 chr15 12859886 12860004 -90634970 + B1_Mus2 SINE Alu 1 115 -5 6 683 378 0 0 0 chr15 12860200 12860242 -90634732 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 683 228 315 90 0 chr15 12860876 12860987 -90633987 + L1M5 LINE L1 5539 5659 -465 6 683 322 332 141 15 chr15 12861107 12861306 -90633668 - MER58A DNA MER1_type 0 224 1 6 683 3550 18 2 0 chr15 12862036 12862431 -90632543 - MTA_Mm LTR MaLR 0 396 1 6 683 9117 41 4 1 chr15 12862431 12863526 -90631448 - MTA_Mm-int LTR MaLR 0 1098 1 6 683 3550 18 2 0 chr15 12863526 12863921 -90631053 - MTA_Mm LTR MaLR 0 396 1 6 683 184 279 144 44 chr15 12866680 12866770 -90628204 - L2c LINE L2 -19 3368 3270 6 683 2166 116 9 26 chr15 12867115 12867482 -90627492 - ORR1A2 LTR MaLR -2 368 1 6 683 210 171 0 0 chr15 12867620 12867661 -90627313 + T-rich Low_complexity Low_complexity 2 42 0 7 683 3075 68 5 2 chr15 12868151 12868550 -90626424 - MTB LTR MaLR 0 400 1 7 683 8016 76 25 7 chr15 12868550 12869628 -90625346 - MTB-int LTR MaLR 0 1098 1 7 683 2896 59 5 0 chr15 12869632 12870022 -90624952 - MTB LTR MaLR -8 392 1 7 683 251 215 15 30 chr15 12872547 12872614 -90622360 + (CACCC)n Simple_repeat Simple_repeat 1 66 0 7 683 236 319 105 35 chr15 12873119 12873291 -90621683 - MER58B DNA MER1_type -157 184 1 7 683 193 325 60 0 chr15 12873610 12873693 -90621281 - MIRb SINE MIR -50 218 131 7 683 263 323 171 5 chr15 12874479 12874672 -90620302 + MIR SINE MIR 15 239 -23 7 683 236 300 12 12 chr15 12874840 12874921 -90620053 + MIRb SINE MIR 120 200 -68 7 683 23 0 0 0 chr15 12875054 12875077 -90619897 + AT_rich Low_complexity Low_complexity 1 23 0 7 683 520 384 76 40 chr15 12876240 12877091 -90617883 - L4 LINE RTE -365 1664 783 7 683 445 274 0 0 chr15 12878458 12878564 -90616410 + PB1D10 SINE Alu 9 114 -3 7 683 252 77 0 0 chr15 12879984 12880023 -90614951 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 7 683 480 117 10 87 chr15 12880242 12880345 -90614629 + ORR1B1 LTR MaLR 37 131 -263 7 683 843 119 66 62 chr15 12880313 12880507 -90614467 + RLTR25B LTR ERVK 11 217 -886 7 683 1082 197 29 106 chr15 12880505 12880778 -90614196 + ORR1B1 LTR MaLR 142 393 -1 7 683 833 273 25 15 chr15 12880973 12881174 -90613800 + ID_B1 SINE B4 2 204 -20 7 683 279 0 0 0 chr15 12882511 12882542 -90612432 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 683 273 217 68 107 chr15 12883084 12883187 -90611787 - ORR1E LTR MaLR -2 377 279 7 683 4857 150 110 11 chr15 12883290 12884225 -90610749 + RLTR25B LTR ERVK 1 1028 0 7 683 306 403 14 7 chr15 12884225 12884362 -90610612 - ORR1E LTR MaLR -218 141 4 7 683 235 203 33 17 chr15 12884468 12884528 -90610446 + GA-rich Low_complexity Low_complexity 2 62 0 7 683 387 292 0 16 chr15 12884611 12884733 -90610241 - MLT1A1 LTR MaLR 0 408 289 7 683 799 221 52 3 chr15 12884904 12885098 -90609876 - B3 SINE B2 0 198 1 7 683 1121 214 109 30 chr15 12885814 12885972 -90609002 - ORR1C2 LTR MaLR -30 344 184 7 683 1197 41 0 0 chr15 12885972 12886119 -90608855 + (GA)n Simple_repeat Simple_repeat 2 148 0 7 683 1121 181 113 12 chr15 12886119 12886287 -90608687 - ORR1C2 LTR MaLR -194 190 1 7 683 789 234 22 97 chr15 12886417 12886644 -90608330 - B3 SINE B2 -6 210 1 7 683 1764 170 32 27 chr15 12886763 12887101 -90607873 - ORR1D1 LTR MaLR 0 374 35 7 683 277 212 22 43 chr15 12887101 12887239 -90607735 + (TATAA)n Simple_repeat Simple_repeat 3 137 0 7 683 5029 185 79 103 chr15 12887271 12887439 -90607535 - ORR1D1-int LTR MaLR 0 1370 1186 7 683 189 0 0 0 chr15 12887439 12887460 -90607514 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 7 683 5029 185 79 103 chr15 12887460 12888297 -90606677 - ORR1D1-int LTR MaLR -185 1185 351 7 683 3935 68 25 6 chr15 12888297 12888826 -90606148 + L1_Mus4 LINE L1 6090 6628 -8 7 683 4782 186 82 102 chr15 12888826 12889222 -90605752 - ORR1D1-int LTR MaLR -1020 350 2 7 683 1622 187 59 3 chr15 12889222 12889576 -90605398 - ORR1D1 LTR MaLR 0 374 1 7 683 436 264 9 9 chr15 12889784 12889895 -90605079 + PB1D9 SINE Alu 1 111 -9 7 683 3357 132 101 22 chr15 12890964 12891187 -90603787 - RLTR17 LTR ERVK 0 692 454 7 683 4503 101 5 5 chr15 12891187 12891815 -90603159 - RLTR5_Mm LTR ERV1 0 628 1 7 683 3357 132 101 22 chr15 12891815 12892232 -90602742 - RLTR17 LTR ERVK -239 453 1 7 683 202 263 57 57 chr15 12894518 12894623 -90600351 + MIRb SINE MIR 143 247 -21 7 683 267 203 0 0 chr15 12895381 12895440 -90599534 + (CG)n Simple_repeat Simple_repeat 1 59 0 7 683 294 29 0 0 chr15 12895440 12895475 -90599499 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 683 287 104 0 20 chr15 12896773 12896822 -90598152 + (TTTTC)n Simple_repeat Simple_repeat 4 51 0 7 683 307 288 107 7 chr15 12896822 12896962 -90598012 + L5 LINE RTE 1406 1559 -706 7 683 442 255 10 0 chr15 12897317 12897415 -90597559 + B1_Mur2 SINE Alu 1 99 -50 7 683 357 24 0 0 chr15 12897425 12897467 -90597507 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 7 683 226 256 30 91 chr15 12897547 12897646 -90597328 + MLT1A0 LTR MaLR 1 93 -272 7 683 700 204 314 48 chr15 12897837 12898044 -90596930 + MTC LTR MaLR 5 266 -155 7 683 899 181 0 6 chr15 12898094 12898266 -90596708 + MTC LTR MaLR 243 413 -8 7 683 263 305 54 47 chr15 12898309 12898457 -90596517 + MLT1J-int LTR MaLR 1208 1356 -31 7 683 819 137 0 73 chr15 12899255 12899393 -90595581 + B1_Mur3 SINE Alu 11 141 -8 7 683 252 0 0 0 chr15 12899393 12899421 -90595553 + (CAA)n Simple_repeat Simple_repeat 2 29 0 7 683 819 137 0 73 chr15 12899421 12899432 -90595542 + B1_Mur3 SINE Alu 142 149 0 7 683 2635 155 43 150 chr15 12899525 12900159 -90594815 - L1_Mur2 LINE L1 -423 5454 4901 7 683 1642 44 0 0 chr15 12900159 12900364 -90594610 + L1Md_F2 LINE L1 6366 6570 -12 7 683 2635 155 43 150 chr15 12900364 12900448 -90594526 - L1_Mur2 LINE L1 -977 4900 4813 7 683 7827 98 3 2 chr15 12900441 12901613 -90593361 + L1_Mus4 LINE L1 5464 6636 0 7 683 975 266 70 4 chr15 12902004 12902276 -90592698 - B4A SINE B4 -2 290 1 7 683 262 291 116 29 chr15 12902552 12902690 -90592284 + MamGypLTR2b LTR Gypsy 773 922 0 7 683 540 0 0 0 chr15 12903321 12903381 -90591593 + (GA)n Simple_repeat Simple_repeat 1 60 0 7 683 351 0 0 0 chr15 12903421 12903460 -90591514 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 683 418 338 21 21 chr15 12903534 12903676 -90591298 - B4A SINE B4 -133 159 18 7 683 442 258 42 0 chr15 12903759 12903872 -90591102 - B3 SINE B2 -3 213 96 7 683 357 24 0 0 chr15 12903872 12903914 -90591060 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 683 278 288 70 31 chr15 12904980 12905109 -90589865 + LTR85c LTR Gypsy? 16 149 -674 7 683 556 256 114 41 chr15 12905693 12905913 -90589061 + B4A SINE B4 34 269 -23 7 683 276 149 0 0 chr15 12905927 12905974 -90589000 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 683 578 300 56 53 chr15 12906058 12906378 -90588596 + ORR1E LTR MaLR 19 339 -20 7 683 438 206 228 0 chr15 12906403 12906539 -90588435 + ORR1E-int LTR MaLR 3 169 -1411 7 683 1006 318 35 32 chr15 12906506 12906888 -90588086 + ORR1E-int LTR MaLR 1145 1527 -53 7 683 451 250 0 0 chr15 12906888 12906980 -90587994 + ORR1E LTR MaLR 1 92 -267 7 683 2107 148 8 11 chr15 12907003 12907358 -90587616 + ORR1B1 LTR MaLR 41 394 0 7 683 341 243 112 0 chr15 12907795 12907902 -90587072 + MLT1E3 LTR MaLR 1 119 -255 7 683 302 315 183 7 chr15 12907983 12908253 -90586721 + MER2 DNA MER2_type 2 319 -26 7 683 438 20 0 0 chr15 12908588 12908639 -90586335 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 683 207 0 0 0 chr15 12908699 12908722 -90586252 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 683 386 282 98 114 chr15 12908725 12909214 -90585760 + MLT1E3 LTR MaLR 122 602 -22 7 683 291 247 163 10 chr15 12909670 12909768 -90585206 + L1M2 LINE L1 3991 4103 -2040 7 683 334 212 125 0 chr15 12910583 12910663 -90584311 + 5S rRNA rRNA 1 90 -31 7 683 294 272 103 17 chr15 12910663 12910699 -90584275 + AmnSINE1 SINE SINE 1 126 -449 7 683 658 135 45 0 chr15 12910797 12910908 -90584066 + B3 SINE B2 1 116 -100 7 683 251 292 57 24 chr15 12911047 12911170 -90583804 - Lx8 LINE L1 -11 7462 7336 7 683 291 250 0 0 chr15 12911175 12911243 -90583731 - RMER15 LTR ERVL -105 470 403 7 683 1179 262 96 0 chr15 12912482 12912826 -90582148 + MTE2a LTR MaLR 2 378 -1 7 683 1303 188 176 178 chr15 12913012 12913320 -90581654 - MT2B LTR ERVL 0 601 353 7 683 201 39 0 0 chr15 12913320 12913346 -90581628 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 7 683 1303 188 176 178 chr15 12913346 12913639 -90581335 - MT2B LTR ERVL -249 352 1 7 683 1532 235 34 0 chr15 12914361 12914719 -90580255 + ORR1D2 LTR MaLR 1 370 0 7 683 361 286 142 14 chr15 12915287 12915473 -90579501 - MLT1B LTR MaLR -1 373 175 7 683 2282 142 59 3 chr15 12915473 12915846 -90579128 + ORR1B1 LTR MaLR 1 394 0 7 683 361 320 94 20 chr15 12915846 12915971 -90579003 - MLT1B LTR MaLR -216 174 30 7 683 918 236 58 154 chr15 12916110 12916525 -90578449 - MTE2a LTR MaLR -4 375 1 7 683 477 0 0 0 chr15 12916630 12916683 -90578291 + (TG)n Simple_repeat Simple_repeat 1 53 0 7 683 242 178 22 0 chr15 12918031 12918076 -90576898 + MIRc SINE MIR 103 148 -120 7 683 629 227 177 6 chr15 12919441 12919605 -90575369 - MTC LTR MaLR -8 413 222 7 683 443 194 0 11 chr15 12919613 12919707 -90575267 + MTD LTR MaLR 322 414 -5 7 683 511 192 173 39 chr15 12919712 12919891 -90575083 + MTD-int LTR MaLR 1 203 -1055 7 683 1977 219 28 42 chr15 12919906 12920339 -90574635 - Lx5 LINE L1 0 7050 6624 7 683 2307 214 73 36 chr15 12920398 12921013 -90573961 + MTD-int LTR MaLR 302 939 -319 7 683 270 0 0 0 chr15 12921036 12921066 -90573908 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 7 683 1137 63 0 14 chr15 12921066 12921203 -90573771 - B1_Mus1 SINE Alu -10 138 2 7 683 737 249 113 10 chr15 12921538 12921741 -90573233 + ID_B1 SINE B4 1 224 0 7 683 585 0 0 0 chr15 12921741 12921806 -90573168 + (GA)n Simple_repeat Simple_repeat 2 66 0 7 683 441 325 42 57 chr15 12921961 12922346 -90572628 + HAL1b LINE L1 1118 1496 -513 7 683 2931 98 11 14 chr15 12922932 12923367 -90571607 + Lx4A LINE L1 6622 7055 -3 7 683 24 0 0 0 chr15 12923368 12923392 -90571582 + AT_rich Low_complexity Low_complexity 1 24 0 7 683 408 286 47 25 chr15 12923406 12923660 -90571314 + B4A SINE B4 9 224 -68 7 683 1306 72 5 2 chr15 12923673 12923873 -90571101 - ORR1A3 LTR MaLR 0 346 144 7 683 3446 198 52 18 chr15 12923873 12924167 -90570807 + Lx5 LINE L1 6294 6589 -461 7 683 261 0 0 0 chr15 12924167 12924196 -90570778 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 683 3446 198 52 18 chr15 12924196 12924626 -90570348 + Lx5 LINE L1 6590 7043 -7 7 683 748 298 41 72 chr15 12924671 12925181 -90569793 - L1_Mur3 LINE L1 -3438 2442 1949 7 683 407 19 19 0 chr15 12925411 12925463 -90569511 + (GA)n Simple_repeat Simple_repeat 2 54 0 7 683 612 289 68 79 chr15 12925464 12925742 -90569232 + B4 SINE B4 6 280 -12 7 683 221 77 51 0 chr15 12925758 12925797 -90569177 + (CATA)n Simple_repeat Simple_repeat 3 43 0 7 683 1665 148 67 78 chr15 12925899 12926257 -90568717 + ORR1B1 LTR MaLR 41 394 0 7 683 594 193 148 192 chr15 12926433 12926748 -90568226 + MTE2a LTR MaLR 2 316 -63 7 683 1541 47 21 5 chr15 12926748 12926939 -90568035 - B2_Mm2 SINE B2 -1 194 1 7 683 594 193 148 192 chr15 12926939 12927014 -90567960 + MTE2a LTR MaLR 317 375 -4 7 683 1356 204 87 6 chr15 12927424 12927770 -90567204 + ORR1D1 LTR MaLR 1 374 0 7 683 5981 175 118 99 chr15 12927830 12929216 -90565758 + Lx7 LINE L1 5354 6872 -824 7 683 873 160 12 23 chr15 12929216 12929389 -90565585 + URR1A DNA MER1_type 56 226 0 7 683 5981 175 118 99 chr15 12929389 12929822 -90565152 + Lx7 LINE L1 6873 7349 -347 7 683 509 167 156 21 chr15 12929878 12930006 -90564968 + Lx7 LINE L1 7537 7685 -11 7 683 182 37 37 0 chr15 12930014 12930041 -90564933 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 7 683 664 101 182 16 chr15 12930041 12930153 -90564821 - B1_Mur4 SINE Alu -13 137 5 8 683 509 181 136 85 chr15 12930153 12930191 -90564783 + Lx7 LINE L1 7686 7696 0 7 683 225 83 0 0 chr15 12930619 12930655 -90564319 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 683 559 343 60 16 chr15 12930663 12930912 -90564062 - B4A SINE B4 -30 262 3 8 683 889 116 0 18 chr15 12931007 12931227 -90563747 + (CA)n Simple_repeat Simple_repeat 1 216 0 8 683 478 260 107 0 chr15 12932210 12932379 -90562595 + Lx8 LINE L1 6814 7000 -473 8 683 1247 256 78 39 chr15 12934190 12934653 -90560321 + Lx8 LINE L1 6976 7456 -17 8 683 1468 122 13 18 chr15 12934881 12935107 -90559867 - URR1B DNA MER1_type 0 225 1 8 683 270 0 0 0 chr15 12935257 12935287 -90559687 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 8 683 1027 93 7 0 chr15 12935289 12935428 -90559546 - B1_Mus2 SINE Alu -6 141 2 8 683 1385 175 4 11 chr15 12936410 12936681 -90558293 - MTC LTR MaLR -1 420 152 8 683 1220 86 0 6 chr15 12936683 12936859 -90558115 + B2_Mm2 SINE B2 19 193 -2 8 683 2194 151 62 5 chr15 12936898 12937271 -90557703 - ORR1B1 LTR MaLR 0 394 1 8 683 432 0 0 0 chr15 12938851 12938899 -90556075 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 683 252 59 0 0 chr15 12939670 12939704 -90555270 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 683 1673 169 51 28 chr15 12940912 12941265 -90553709 + ORR1C1 LTR MaLR 10 370 -8 8 683 843 267 21 4 chr15 12942283 12942516 -90552458 - L1M2 LINE L1 -495 5796 5560 8 683 2584 197 65 22 chr15 12942633 12943184 -90551790 - RMER15 LTR ERVL 0 575 1 8 683 244 303 73 8 chr15 12943250 12943373 -90551601 - L1M2 LINE L1 -852 5291 5161 8 683 637 219 78 0 chr15 12943377 12943505 -90551469 - B1_Mur2 SINE Alu -10 139 2 8 683 418 264 110 38 chr15 12943557 12943611 -90551363 - L1_Mur2 LINE L1 -796 5081 5017 8 683 2028 165 114 64 chr15 12943611 12944110 -90550864 - RLTR28 LTR ERVL 0 524 1 8 683 427 264 110 38 chr15 12944110 12944291 -90550683 - L1_Mur2 LINE L1 -861 5016 4830 8 683 228 35 0 0 chr15 12944745 12944774 -90550200 + (TC)n Simple_repeat Simple_repeat 1 29 0 8 683 2330 111 96 0 chr15 12944774 12945118 -90549856 - Lx LINE L1 -1 6653 6277 8 683 377 282 13 13 chr15 12945927 12946005 -90548969 - RSINE1 SINE B4 0 165 88 8 683 677 130 28 9 chr15 12946005 12946114 -90548860 + RMER6C LTR ERVK 1 111 -579 8 683 242 258 45 15 chr15 12946100 12946167 -90548807 + MT2B LTR ERVL 183 251 -350 8 683 1380 180 123 10 chr15 12946141 12946449 -90548525 + RMER6C LTR ERVK 348 690 0 8 683 216 259 23 80 chr15 12946459 12946547 -90548427 - B4 SINE B4 -209 83 1 8 683 954 116 0 0 chr15 12947186 12947333 -90547641 + (TTTCC)n Simple_repeat Simple_repeat 3 149 0 8 683 562 329 73 9 chr15 12947848 12948066 -90546908 - Lx8 LINE L1 -246 7227 6996 8 683 1515 160 196 13 chr15 12948066 12948382 -90546592 + ORR1D1 LTR MaLR 1 374 0 8 683 3853 231 52 55 chr15 12948382 12949700 -90545274 + ORR1D1-int LTR MaLR 1 1251 -258 8 683 273 29 0 0 chr15 12949700 12949734 -90545240 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 683 2779 283 72 109 chr15 12949734 12949981 -90544993 + ORR1D1-int LTR MaLR 1252 1509 0 8 683 1308 224 139 3 chr15 12949987 12950310 -90544664 + ORR1D1 LTR MaLR 7 373 -1 8 683 407 255 32 0 chr15 12950310 12950404 -90544570 - Lx8 LINE L1 -472 7001 6905 8 683 405 0 0 0 chr15 12950428 12950473 -90544501 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 683 789 238 7 0 chr15 12950474 12950625 -90544349 - B3A SINE B2 -46 152 1 8 683 1550 283 102 33 chr15 12950638 12950684 -90544290 - Lx8 LINE L1 -561 6912 6863 8 683 255 79 0 0 chr15 12950684 12950722 -90544252 + (CAAT)n Simple_repeat Simple_repeat 3 40 0 8 683 1550 283 102 33 chr15 12950722 12951255 -90543719 - Lx8 LINE L1 -611 6862 6293 8 683 1077 252 86 99 chr15 12951259 12951633 -90543341 - MTD LTR MaLR 0 419 51 8 683 1569 245 64 30 chr15 12951677 12952417 -90542557 - Lx8 LINE L1 -1209 6264 5446 8 683 515 343 14 7 chr15 12952418 12952562 -90542412 - RSINE1 SINE B4 -10 155 11 8 683 563 311 0 0 chr15 12952589 12952737 -90542237 - B1_Mur2 SINE Alu -1 148 1 8 683 34 24 0 0 chr15 12952806 12952847 -90542127 + AT_rich Low_complexity Low_complexity 1 41 0 8 683 22 35 0 0 chr15 12953020 12953049 -90541925 + AT_rich Low_complexity Low_complexity 1 29 0 8 683 2381 153 54 61 chr15 12953354 12953778 -90541196 - MTC LTR MaLR 0 421 1 8 683 392 267 47 9 chr15 12954086 12954192 -90540782 + RMER15 LTR ERVL 452 561 -14 8 683 354 339 46 46 chr15 12954354 12954549 -90540425 - ORR1E LTR MaLR -162 197 3 8 683 1034 230 71 24 chr15 12956359 12956653 -90538321 + Lx6 LINE L1 7153 7460 0 8 683 1183 245 83 34 chr15 12957257 12957582 -90537392 + ORR1D2 LTR MaLR 1 341 -29 8 683 546 16 0 0 chr15 12957948 12958011 -90536963 + (TC)n Simple_repeat Simple_repeat 2 64 0 8 683 189 0 0 0 chr15 12958090 12958111 -90536863 + (T)n Simple_repeat Simple_repeat 1 21 0 8 683 213 39 0 0 chr15 12958368 12958394 -90536580 + (CAA)n Simple_repeat Simple_repeat 2 27 0 8 683 183 118 29 0 chr15 12958655 12958689 -90536285 + L2c LINE L2 2979 3013 -374 8 683 24 0 0 0 chr15 12959159 12959183 -90535791 + AT_rich Low_complexity Low_complexity 1 24 0 8 683 192 77 0 0 chr15 12961836 12961862 -90533112 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 683 216 0 0 0 chr15 12961987 12962011 -90532963 + (TA)n Simple_repeat Simple_repeat 2 25 0 8 683 270 0 0 0 chr15 12963124 12963154 -90531820 + (T)n Simple_repeat Simple_repeat 1 30 0 8 683 459 0 0 0 chr15 12963399 12963450 -90531524 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 683 28 0 0 0 chr15 12964746 12964774 -90530200 + AT_rich Low_complexity Low_complexity 1 28 0 8 683 21 0 0 0 chr15 12965007 12965028 -90529946 + AT_rich Low_complexity Low_complexity 1 21 0 8 683 184 293 17 33 chr15 12965792 12965852 -90529122 - MIR SINE MIR -196 66 8 8 683 299 305 87 78 chr15 12965996 12966227 -90528747 - L2a LINE L2 0 3426 3194 8 683 232 283 158 7 chr15 12967065 12967211 -90527763 + MIRc SINE MIR 101 268 0 8 683 237 268 27 27 chr15 12967366 12967439 -90527535 - ID4 SINE ID -9 74 2 8 683 242 294 82 41 chr15 12967641 12967811 -90527163 + MIRb SINE MIR 40 216 -52 8 683 818 264 51 4 chr15 12968056 12968331 -90526643 + L1MA4 LINE L1 5662 5953 -347 8 683 477 0 0 0 chr15 12968359 12968412 -90526562 + (TC)n Simple_repeat Simple_repeat 2 54 0 8 683 507 276 25 30 chr15 12969019 12969194 -90525780 - ID_B1 SINE B4 -26 266 94 8 683 890 207 116 25 chr15 12969265 12969463 -90525511 - B3 SINE B2 0 216 1 8 683 244 300 43 22 chr15 12969579 12969671 -90525303 - MTEa LTR MaLR -8 371 278 8 683 267 54 0 0 chr15 12971287 12971324 -90523650 + (T)n Simple_repeat Simple_repeat 1 37 0 8 683 258 281 86 18 chr15 12971418 12971581 -90523393 - MER20 DNA MER1_type -45 174 1 8 683 556 287 94 79 chr15 12971879 12972272 -90522702 - MamRep434 DNA TcMar 0 426 28 8 683 1542 73 10 5 chr15 12973079 12973272 -90521702 - B2_Mm2 SINE B2 0 195 2 8 683 568 159 12 19 chr15 12974835 12974995 -90519979 + (TG)n Simple_repeat Simple_repeat 1 159 0 8 683 434 333 59 109 chr15 12975053 12975309 -90519665 - B4A SINE B4 0 292 50 8 85 1579 267 64 48 chr15 12975369 12976160 -90518814 + Lx5 LINE L1 6049 6975 -75 8 684 895 221 76 15 chr15 12976163 12976477 -90518497 + Lx3C LINE L1 6646 6998 -2 8 684 714 237 120 60 chr15 12978410 12978594 -90516380 - B3A SINE B2 -1 197 3 8 684 373 288 41 100 chr15 12979575 12979795 -90515179 + L2 LINE L2 2775 2981 -438 8 684 251 209 44 15 chr15 12979797 12979865 -90515109 + CT-rich Low_complexity Low_complexity 5 74 0 8 684 222 320 115 25 chr15 12981702 12981859 -90513115 + MER5B DNA MER1_type 1 171 -7 8 684 424 321 50 86 chr15 12983212 12983515 -90511459 - B4A SINE B4 0 292 1 8 684 461 271 13 129 chr15 12983795 12984020 -90510954 - Tigger7 DNA MER2_type -1 2490 2292 8 684 1029 75 105 0 chr15 12984410 12984543 -90510431 - B1_Mm SINE Alu 0 147 1 8 684 432 221 124 9 chr15 12984807 12984912 -90510062 - B1_Mur2 SINE Alu 0 120 4 8 684 240 244 9 182 chr15 12984821 12984931 -90510043 - MT2B LTR ERVL -356 245 155 8 684 273 105 0 0 chr15 12985102 12985140 -90509834 + tRNA-Gly-GGA tRNA tRNA 1 38 -37 8 684 3710 15 5 0 chr15 12985153 12985547 -90509427 + MTA_Mm LTR MaLR 1 396 0 8 684 248 291 0 0 chr15 12986088 12986143 -90508831 + polypyrimidine Low_complexity Low_complexity 5 59 0 8 684 470 323 83 29 chr15 12986174 12986378 -90508596 - B3 SINE B2 -1 215 1 8 684 309 254 239 26 chr15 12986379 12986496 -90508478 - B1F2 SINE Alu -5 144 3 8 684 21 0 0 0 chr15 12987036 12987057 -90507917 + AT_rich Low_complexity Low_complexity 1 21 0 8 684 250 298 172 6 chr15 12988233 12988402 -90506572 - L3b LINE CR1 -285 197 1 8 684 288 0 0 0 chr15 12988972 12989004 -90505970 + (T)n Simple_repeat Simple_repeat 1 32 0 8 684 573 333 110 43 chr15 12989216 12989589 -90505385 - MLT1I LTR MaLR -11 400 3 8 684 1179 243 233 3 chr15 12990267 12990606 -90504368 + MTD LTR MaLR 1 417 -2 8 684 689 258 19 13 chr15 12991243 12991283 -90503691 + ID SINE ID 41 81 -143 8 684 396 303 27 33 chr15 12991283 12991433 -90503541 + B1F1 SINE Alu 1 149 0 8 684 375 373 43 67 chr15 12992018 12992271 -90502703 - MIRb SINE MIR -21 247 1 8 684 197 59 0 56 chr15 12992576 12992612 -90502362 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 8 684 207 0 0 0 chr15 12992646 12992669 -90502305 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 684 231 36 0 0 chr15 12992689 12992717 -90502257 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 8 684 373 50 0 32 chr15 12992844 12992906 -90502068 + (GGGTG)n Simple_repeat Simple_repeat 3 62 0 8 684 309 109 0 0 chr15 12993415 12993461 -90501513 + (TG)n Simple_repeat Simple_repeat 1 46 0 8 684 519 274 20 7 chr15 12993461 12993608 -90501366 - RSINE1 SINE B4 -16 149 1 8 684 405 0 0 0 chr15 12993642 12993687 -90501287 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 8 684 255 274 13 140 chr15 12994939 12995096 -90499878 + L3 LINE CR1 4264 4400 -89 9 684 1363 136 17 39 chr15 12995492 12995722 -90499252 - URR1B DNA MER1_type 0 225 1 9 684 224 322 64 14 chr15 12996711 12996880 -90498094 + MIRc SINE MIR 69 252 -16 9 684 231 152 0 0 chr15 12998652 12998685 -90496289 - U2 snRNA snRNA -155 33 1 9 684 1315 228 141 27 chr15 12998811 12999145 -90495829 + ORR1D1 LTR MaLR 3 374 0 9 684 269 208 96 14 chr15 12999462 12999535 -90495439 - MTEa LTR MaLR -23 356 278 9 684 189 0 0 0 chr15 13000219 13000240 -90494734 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 684 194 231 0 0 chr15 13000318 13000357 -90494617 + MER5A DNA MER1_type 122 160 -29 2 684 608 239 28 37 chr15 13000381 13000598 -90494376 - B3 SINE B2 -1 215 1 3 684 186 296 61 12 chr15 13001293 13001375 -90493599 + MIRc SINE MIR 72 157 -111 4 684 385 304 49 111 chr15 13003613 13003839 -90491135 - MamGypLTR2 LTR Gypsy -5 1184 973 5 684 734 272 44 19 chr15 13003895 13004101 -90490873 - B3 SINE B2 -4 212 2 6 684 743 83 0 9 chr15 13004711 13004820 -90490154 + (TCCC)n Simple_repeat Simple_repeat 3 110 0 7 684 669 177 22 9 chr15 13004822 13005050 -90489924 + (TCTA)n Simple_repeat Simple_repeat 1 231 0 8 684 536 310 89 98 chr15 13005374 13005732 -90489242 + MLT1D LTR MaLR 1 355 -150 9 684 431 277 0 135 chr15 13005757 13005850 -90489124 - B1F SINE Alu -8 141 67 1 684 4414 27 8 0 chr15 13005850 13006363 -90488611 - L1Md_F3 LINE L1 0 6584 6068 1 684 431 277 0 135 chr15 13006363 13006432 -90488542 - B1F SINE Alu -83 66 1 1 684 353 266 43 60 chr15 13006459 13006575 -90488399 + MLT1D LTR MaLR 382 495 -10 9 684 224 315 120 51 chr15 13006800 13006917 -90488057 - MIRm SINE MIR -144 132 8 1 684 459 0 0 0 chr15 13007354 13007405 -90487569 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 684 2105 256 203 36 chr15 13007827 13008607 -90486367 + Lx5 LINE L1 6240 7366 -94 1 684 248 172 0 17 chr15 13008652 13008711 -90486263 + GA-rich Low_complexity Low_complexity 3 60 0 1 684 1245 34 0 0 chr15 13009615 13009762 -90485212 + B1_Mm SINE Alu 1 147 0 1 684 1085 124 6 13 chr15 13009885 13010200 -90484774 + (CCA)n Simple_repeat Simple_repeat 1 312 0 1 684 231 88 0 0 chr15 13010229 13010263 -90484711 + (CGAAA)n Simple_repeat Simple_repeat 3 36 0 1 684 204 40 0 0 chr15 13010451 13010476 -90484498 + (T)n Simple_repeat Simple_repeat 1 25 0 1 684 208 295 0 0 chr15 13010668 13010729 -90484245 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 684 639 282 75 43 chr15 13010762 13010790 -90484184 - B4A SINE B4 0 292 266 2 684 180 0 0 0 chr15 13010790 13010810 -90484164 + (CATG)n Simple_repeat Simple_repeat 1 20 0 2 684 639 282 75 43 chr15 13010810 13011059 -90483915 - B4A SINE B4 -27 265 6 2 684 237 292 44 9 chr15 13011064 13011178 -90483796 - PB1D9 SINE Alu -2 118 1 2 684 351 0 0 0 chr15 13011575 13011614 -90483360 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 684 392 314 48 26 chr15 13012541 13012770 -90482204 + RMER15 LTR ERVL 327 560 -15 2 684 227 240 168 58 chr15 13013001 13013156 -90481818 - MIR SINE MIR -31 231 60 2 684 423 0 0 0 chr15 13013471 13013518 -90481456 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 684 423 0 0 0 chr15 13013518 13013564 -90481410 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 684 977 206 11 0 chr15 13013698 13013882 -90481092 + B3 SINE B2 1 186 -30 2 684 432 158 0 0 chr15 13015355 13015431 -90479543 + CT-rich Low_complexity Low_complexity 3 78 0 3 684 403 234 16 56 chr15 13015673 13015816 -90479158 - MLT1A1 LTR MaLR -19 389 226 3 684 189 159 0 0 chr15 13016794 13016838 -90478136 + (CTAAA)n Simple_repeat Simple_repeat 3 46 0 3 684 209 182 35 52 chr15 13017504 13017562 -90477412 + MER5B DNA MER1_type 78 134 -44 3 684 306 200 0 14 chr15 13017568 13017639 -90477335 - MER5A1 DNA MER1_type -6 160 91 3 684 298 208 0 77 chr15 13017640 13017718 -90477256 + URR1A DNA MER1_type 1 72 -154 3 684 785 281 126 15 chr15 13018513 13018910 -90476064 + MER119 DNA MER1_type 92 532 -51 3 684 21 0 0 0 chr15 13019079 13019100 -90475874 + AT_rich Low_complexity Low_complexity 1 21 0 3 684 296 222 16 0 chr15 13019107 13019170 -90475804 - ID2 SINE ID -16 67 4 3 684 438 20 0 0 chr15 13022398 13022449 -90472525 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 684 296 310 32 70 chr15 13024570 13024757 -90470217 + MIR SINE MIR 81 260 -2 4 684 240 322 85 96 chr15 13026058 13026340 -90468634 + MamRep434 DNA TcMar 12 290 -136 4 684 772 336 64 38 chr15 13026937 13027435 -90467539 - Lx8 LINE L1 -9 7464 6954 4 684 5551 91 22 6 chr15 13028473 13029251 -90465723 + L1_Mus4 LINE L1 5842 6631 -5 4 684 1712 320 111 7 chr15 13029284 13030103 -90464871 + Lx8 LINE L1 6558 7461 -12 4 684 288 321 70 40 chr15 13032326 13032527 -90462447 - LTR79 LTR ERVL -1 526 320 4 684 42 57 0 0 chr15 13034047 13034117 -90460857 + AT_rich Low_complexity Low_complexity 1 70 0 4 684 717 197 32 19 chr15 13034118 13034273 -90460701 - RSINE1 SINE B4 -7 158 2 4 684 1000 258 79 13 chr15 13034828 13035013 -90459961 + MLT1A0 LTR MaLR 1 201 -164 4 684 594 0 0 0 chr15 13035013 13035079 -90459895 + (GA)n Simple_repeat Simple_repeat 1 66 0 4 684 1000 262 72 14 chr15 13035079 13035227 -90459747 + MLT1A0 LTR MaLR 202 457 -10 4 684 6825 58 15 0 chr15 13035883 13036729 -90458245 + L1_Mus2 LINE L1 5708 6566 0 5 684 273 346 73 0 chr15 13039419 13039555 -90455419 + Lx8 LINE L1 6991 7136 -337 5 684 1686 130 0 0 chr15 13039562 13039801 -90455173 + L1Md_F2 LINE L1 363 601 -6015 5 684 6120 71 5 1 chr15 13039797 13040617 -90454357 + L1_Mm LINE L1 1651 2473 -3410 5 684 34609 66 2 16 chr15 13040615 13045765 -90449209 + L1Md_F2 LINE L1 511 5586 -297 5 684 7621 60 19 12 chr15 13045765 13046752 -90448222 + L1Md_F2 LINE L1 5587 6580 -2 5 684 288 349 50 61 chr15 13046752 13047094 -90447880 + Lx8 LINE L1 7133 7470 -3 5 684 327 136 0 0 chr15 13047094 13047153 -90447821 + (TG)n Simple_repeat Simple_repeat 1 59 0 5 684 290 200 64 136 chr15 13047160 13047270 -90447704 - L1MA8 LINE L1 -34 6257 6156 5 684 21 36 0 0 chr15 13047270 13047298 -90447676 + AT_rich Low_complexity Low_complexity 1 28 0 5 684 22 0 0 0 chr15 13047512 13047534 -90447440 + AT_rich Low_complexity Low_complexity 1 22 0 5 684 288 324 96 32 chr15 13049605 13049793 -90445181 + ID_B1 SINE B4 16 215 -9 5 684 535 309 7 28 chr15 13050301 13050444 -90444530 + RSINE1 SINE B4 12 151 -14 5 684 581 284 91 59 chr15 13051432 13051772 -90443202 + LTR88b LTR Gypsy? 2 352 -485 6 684 225 0 0 0 chr15 13052275 13052300 -90442674 + (T)n Simple_repeat Simple_repeat 1 25 0 6 684 258 279 155 7 chr15 13052870 13053018 -90441956 + L1M1 LINE L1 5734 5903 -397 6 684 1093 185 52 9 chr15 13053851 13054064 -90440910 + ORR1C2 LTR MaLR 161 382 -2 6 684 21 0 0 0 chr15 13056120 13056141 -90438833 + AT_rich Low_complexity Low_complexity 1 21 0 6 684 340 341 33 11 chr15 13056252 13056433 -90438541 + MIR3 SINE MIR 17 201 -7 6 684 620 303 88 33 chr15 13056805 13057112 -90437862 + MER33 DNA MER1_type 1 324 0 6 684 266 115 0 19 chr15 13057389 13057442 -90437532 + (TTTTA)n Simple_repeat Simple_repeat 3 54 0 6 684 393 352 7 0 chr15 13057557 13057699 -90437275 - B1F1 SINE Alu -6 143 1 6 684 1060 173 108 10 chr15 13059909 13060113 -90434861 - URR1A DNA MER1_type 0 226 3 6 684 211 184 0 0 chr15 13061218 13061256 -90433718 + C-rich Low_complexity Low_complexity 5 42 0 7 684 395 67 0 32 chr15 13061329 13061391 -90433583 + B1_Mus1 SINE Alu 1 60 -88 7 684 427 164 0 0 chr15 13061391 13061530 -90433444 + (CAGAGA)n Simple_repeat Simple_repeat 1 139 0 7 684 603 125 19 0 chr15 13061533 13061637 -90433337 + B1_Mus2 SINE Alu 42 147 0 7 684 794 186 208 6 chr15 13061676 13061854 -90433120 + B3 SINE B2 1 214 -2 7 684 1216 268 40 22 chr15 13062466 13062836 -90432138 + MTE2b LTR MaLR 1 377 -2 7 684 752 238 26 0 chr15 13063266 13063459 -90431515 - B3 SINE B2 -18 198 1 7 684 187 241 52 0 chr15 13063648 13063706 -90431268 + MIR SINE MIR 173 233 -29 7 684 23 54 0 0 chr15 13063770 13063807 -90431167 + AT_rich Low_complexity Low_complexity 1 37 0 7 684 432 0 0 0 chr15 13065430 13065478 -90429496 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 684 375 269 0 0 chr15 13066029 13066107 -90428867 - ID4 SINE ID -2 81 4 8 684 237 288 0 0 chr15 13068027 13068086 -90426888 + MLT1D LTR MaLR 272 330 -175 8 684 225 188 0 0 chr15 13068116 13068164 -90426810 + T-rich Low_complexity Low_complexity 1 48 0 8 684 749 250 57 57 chr15 13068692 13068972 -90426002 + MTE2a LTR MaLR 1 280 -99 8 684 459 0 0 0 chr15 13069866 13069917 -90425057 + (TA)n Simple_repeat Simple_repeat 2 52 0 8 684 191 320 25 25 chr15 13070063 13070143 -90424831 + MIR SINE MIR 72 151 -111 8 684 374 299 43 21 chr15 13070492 13070632 -90424342 - MER20 DNA MER1_type -75 144 2 8 684 342 217 8 42 chr15 13070676 13070796 -90424178 + BC1_Mm scRNA scRNA 20 135 -17 8 684 237 33 0 0 chr15 13070797 13070827 -90424147 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 684 651 11 34 0 chr15 13072069 13072157 -90422817 + (GA)n Simple_repeat Simple_repeat 2 92 0 8 684 26 30 0 0 chr15 13072294 13072327 -90422647 + AT_rich Low_complexity Low_complexity 1 33 0 9 684 504 196 88 0 chr15 13073193 13073295 -90421679 + MTC LTR MaLR 1 111 -310 9 684 1467 173 74 10 chr15 13073520 13073830 -90421144 + MTC LTR MaLR 90 419 -2 9 684 182 274 43 87 chr15 13073850 13073942 -90421032 - MIRm SINE MIR -123 153 66 9 684 2465 89 3 9 chr15 13074542 13074871 -90420103 - ORR1A2 LTR MaLR 0 327 1 9 684 1526 0 0 0 chr15 13076048 13076220 -90418754 - L1Md_A LINE L1 0 6582 6411 9 684 180 0 0 0 chr15 13076252 13076272 -90418702 + (TA)n Simple_repeat Simple_repeat 2 21 0 9 684 240 264 56 0 chr15 13076993 13077065 -90417909 + B1F SINE Alu 25 100 -49 9 684 693 71 47 0 chr15 13077071 13077198 -90417776 + (CAGAGA)n Simple_repeat Simple_repeat 4 136 0 9 684 378 0 0 0 chr15 13077267 13077309 -90417665 + (TG)n Simple_repeat Simple_repeat 2 43 0 9 684 387 325 38 19 chr15 13077344 13077504 -90417470 - MLT2B4 LTR ERVL -390 166 4 9 684 25 0 0 0 chr15 13077899 13077924 -90417050 + AT_rich Low_complexity Low_complexity 1 25 0 1 684 411 38 0 0 chr15 13078988 13079041 -90415933 + (T)n Simple_repeat Simple_repeat 1 53 0 1 684 24 32 0 0 chr15 13079210 13079241 -90415733 + AT_rich Low_complexity Low_complexity 1 31 0 1 684 280 320 0 10 chr15 13079363 13079461 -90415513 - RMER15 LTR ERVL -108 467 371 1 684 1156 282 103 3 chr15 13079465 13079835 -90415139 - Lx8 LINE L1 -244 7229 6823 1 684 378 0 0 0 chr15 13079916 13079958 -90415016 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1 684 291 307 48 105 chr15 13080310 13080605 -90414369 - ORR1E LTR MaLR 0 359 82 1 684 242 0 61 0 chr15 13080695 13080728 -90414246 + (TCTCTG)n Simple_repeat Simple_repeat 6 40 0 1 684 887 194 21 41 chr15 13080843 13081037 -90413937 - Lx7 LINE L1 0 7696 7507 1 684 796 160 46 0 chr15 13081062 13081193 -90413781 - Lx6 LINE L1 -676 6784 6648 1 684 739 248 243 21 chr15 13081346 13081581 -90413393 + B4 SINE B4 1 287 -5 1 684 203 88 29 0 chr15 13084436 13084470 -90410504 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 1 684 232 48 48 0 chr15 13085128 13085170 -90409804 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 684 291 308 0 0 chr15 13085697 13085775 -90409199 + (TG)n Simple_repeat Simple_repeat 1 78 0 1 684 419 141 13 0 chr15 13088670 13088748 -90406226 + GA-rich Low_complexity Low_complexity 3 81 0 1 684 222 298 83 58 chr15 13088913 13089034 -90405940 - L2c LINE L2 0 3387 3264 1 684 318 26 0 0 chr15 13089207 13089246 -90405728 + (TGG)n Simple_repeat Simple_repeat 1 39 0 1 684 272 254 200 9 chr15 13089377 13089492 -90405482 + B1F SINE Alu 1 137 -12 1 684 282 202 24 12 chr15 13090532 13090617 -90404357 + T-rich Low_complexity Low_complexity 6 91 0 1 684 276 213 0 0 chr15 13090777 13090838 -90404136 + (CATATA)n Simple_repeat Simple_repeat 6 66 0 1 684 1174 69 0 0 chr15 13092188 13092332 -90402642 + B1_Mus2 SINE Alu 2 145 -2 1 684 237 125 0 40 chr15 13092332 13092382 -90402592 + A-rich Low_complexity Low_complexity 1 48 0 1 684 613 318 8 24 chr15 13092850 13093098 -90401876 + Lx7 LINE L1 7180 7423 -273 1 684 189 0 0 0 chr15 13093967 13093988 -90400986 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1 684 307 235 24 24 chr15 13094265 13094348 -90400626 - BC1_Mm scRNA scRNA -64 88 6 1 684 277 281 129 68 chr15 13094518 13094812 -90400162 - Charlie18a DNA MER1_type 0 342 31 1 684 189 0 0 0 chr15 13095074 13095095 -90399879 + (T)n Simple_repeat Simple_repeat 1 21 0 1 684 384 272 16 31 chr15 13095548 13095677 -90399297 + ID_B1 SINE B4 82 208 -16 1 684 198 103 0 0 chr15 13095699 13095728 -90399246 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1 684 560 343 39 25 chr15 13095827 13096108 -90398866 - B4 SINE B4 -7 285 1 1 684 235 258 65 0 chr15 13096659 13096721 -90398253 + ID4_ SINE ID 18 83 0 1 684 528 286 7 0 chr15 13096744 13096891 -90398083 + B1F SINE Alu 1 148 -1 1 684 738 232 60 11 chr15 13097009 13097192 -90397782 + B3 SINE B2 4 195 -21 1 684 239 54 0 26 chr15 13097193 13097231 -90397743 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 1 684 501 68 0 0 chr15 13097244 13097318 -90397656 + (TC)n Simple_repeat Simple_repeat 1 74 0 1 684 429 54 0 0 chr15 13097318 13097374 -90397600 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 684 822 21 0 0 chr15 13097600 13097696 -90397278 + (GAGAA)n Simple_repeat Simple_repeat 4 99 0 1 684 636 244 17 70 chr15 13099502 13099674 -90395300 + RSINE1 SINE B4 3 165 0 1 684 434 240 23 0 chr15 13099685 13099856 -90395118 + (CA)n Simple_repeat Simple_repeat 2 176 0 1 684 351 0 0 0 chr15 13102386 13102425 -90392549 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 684 378 0 0 0 chr15 13106310 13106352 -90388622 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 684 354 23 0 0 chr15 13106352 13106394 -90388580 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 684 332 304 14 36 chr15 13106395 13106535 -90388439 - B4 SINE B4 -27 265 129 1 684 479 253 69 69 chr15 13106543 13106717 -90388257 - B4 SINE B4 -116 176 3 1 684 412 267 8 57 chr15 13106825 13106948 -90388026 + B3 SINE B2 2 118 -98 1 685 507 206 65 0 chr15 13107764 13107871 -90387103 - B1_Mus1 SINE Alu -34 114 1 1 685 266 221 124 21 chr15 13108566 13108663 -90386311 + Kanga1 DNA Tc2 1635 1741 -4 1 685 231 336 30 30 chr15 13108682 13108817 -90386157 + L3 LINE CR1 4268 4402 -87 1 685 840 256 10 10 chr15 13109110 13109307 -90385667 - B3A SINE B2 0 198 2 1 685 280 284 78 0 chr15 13109338 13109454 -90385520 - MIR SINE MIR -56 206 82 1 685 785 243 119 35 chr15 13110120 13110216 -90384758 - RMER15 LTR ERVL -15 560 469 1 685 720 0 0 0 chr15 13110216 13110296 -90384678 + (TTC)n Simple_repeat Simple_repeat 2 81 0 1 685 785 243 119 35 chr15 13110296 13110459 -90384515 - RMER15 LTR ERVL -107 468 280 1 685 401 296 7 65 chr15 13111336 13111491 -90383483 + Lx8 LINE L1 6230 6375 -1098 1 685 2310 218 77 23 chr15 13115813 13116334 -90378640 - RMER15 LTR ERVL 0 575 27 1 685 405 0 0 0 chr15 13116399 13116444 -90378530 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 685 340 203 0 0 chr15 13116464 13116523 -90378451 - RMER15 LTR ERVL -516 59 1 1 685 360 226 0 0 chr15 13118523 13118647 -90376327 + GA-rich Low_complexity Low_complexity 2 125 0 1 685 240 338 14 41 chr15 13119212 13119357 -90375617 - L1MA6 LINE L1 -163 6137 5997 1 685 233 342 50 42 chr15 13119362 13119481 -90375493 + MIR SINE MIR 97 216 -46 1 685 21 71 0 0 chr15 13121172 13121214 -90373760 + AT_rich Low_complexity Low_complexity 1 42 0 1 685 717 12 0 0 chr15 13121781 13121863 -90373111 + (TCCC)n Simple_repeat Simple_repeat 3 84 0 1 685 252 0 0 0 chr15 13121864 13121892 -90373082 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 685 586 248 73 68 chr15 13121895 13122072 -90372902 - B3A SINE B2 -14 184 7 1 685 23 54 0 0 chr15 13122076 13122113 -90372861 + AT_rich Low_complexity Low_complexity 1 37 0 1 685 396 0 0 0 chr15 13122190 13122234 -90372740 + (CAAAA)n Simple_repeat Simple_repeat 4 47 0 1 685 671 306 86 4 chr15 13122906 13123139 -90371835 + LFSINE_Vert SINE SINE 4 255 -204 1 685 760 307 26 72 chr15 13123601 13123906 -90371068 + B4 SINE B4 2 292 0 1 685 222 267 0 0 chr15 13123918 13124019 -90370955 + (CA)n Simple_repeat Simple_repeat 1 101 0 1 685 528 211 0 0 chr15 13124035 13124187 -90370787 + (CA)n Simple_repeat Simple_repeat 2 153 0 1 685 28 0 0 0 chr15 13124440 13124468 -90370506 + AT_rich Low_complexity Low_complexity 1 28 0 1 685 753 174 0 27 chr15 13124773 13125037 -90369937 + (CA)n Simple_repeat Simple_repeat 1 256 0 1 685 428 0 19 0 chr15 13125150 13125202 -90369772 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 685 1258 62 0 0 chr15 13125525 13125671 -90369303 + B1_Mus2 SINE Alu 1 146 -1 1 685 329 327 19 9 chr15 13127491 13127596 -90367378 + B3A SINE B2 2 107 -91 1 685 458 333 0 8 chr15 13127652 13127776 -90367198 + RSINE1 SINE B4 2 124 -41 1 685 513 76 0 0 chr15 13127874 13127953 -90367021 + (GA)n Simple_repeat Simple_repeat 2 80 0 1 685 3541 130 66 9 chr15 13128320 13128878 -90366096 + Lx2 LINE L1 6408 6997 0 1 685 4854 89 0 52 chr15 13129759 13130435 -90364539 - L1_Mus2 LINE L1 -6 6560 5920 1 685 2848 69 7 0 chr15 13130435 13130825 -90364149 + L1_Mus2 LINE L1 5539 5944 -622 1 685 427 293 189 15 chr15 13130866 13131209 -90363765 - Lx9 LINE L1 0 7644 7242 1 685 285 331 30 36 chr15 13131322 13131488 -90363486 - Lx8 LINE L1 -440 7033 6869 1 685 687 230 58 0 chr15 13131785 13131959 -90363015 + L1MC2 LINE L1 5709 5892 -452 1 685 320 331 93 80 chr15 13132119 13132375 -90362599 - MT2A LTR ERVL -141 392 1 1 685 347 295 130 15 chr15 13132375 13132506 -90362468 - MTE2a LTR MaLR -233 146 1 1 685 248 344 36 30 chr15 13132507 13132624 -90362350 + L1MC2 LINE L1 5905 6019 -1766 1 685 2498 111 0 0 chr15 13132624 13132949 -90362025 - ORR1A3 LTR MaLR 0 326 2 1 685 248 344 36 30 chr15 13132949 13132996 -90361978 + L1MC2 LINE L1 6020 6069 -1716 1 685 275 301 12 24 chr15 13133014 13133099 -90361875 - MER34 LTR ERV1 -65 477 394 1 685 3925 152 3 3 chr15 13133480 13134127 -90360847 - L1_Mm LINE L1 -396 5487 4841 1 685 2317 98 0 33 chr15 13134124 13134461 -90360513 + L1_Mm LINE L1 5462 5787 -96 1 685 4465 57 2 2 chr15 13134469 13134997 -90359977 - L1_Mus1 LINE L1 0 6567 6040 1 685 6210 80 52 10 chr15 13134996 13135825 -90359149 + L1_Mus4 LINE L1 5768 6631 -5 1 685 23 54 0 0 chr15 13136781 13136818 -90358156 + AT_rich Low_complexity Low_complexity 1 37 0 1 685 536 367 63 8 chr15 13137176 13137519 -90357455 - Tigger5 DNA MER2_type -2162 244 2 1 685 358 20 19 19 chr15 13137520 13137572 -90357402 + (TTATA)n Simple_repeat Simple_repeat 3 54 0 1 685 241 338 56 51 chr15 13138789 13139004 -90355970 + MIR SINE MIR 4 219 -43 1 685 621 308 79 52 chr15 13139078 13139383 -90355591 - LTR40a LTR ERVL 0 519 207 1 685 272 297 222 14 chr15 13139533 13139745 -90355229 - MLT1A1 LTR MaLR -113 295 40 1 685 347 366 33 0 chr15 13139789 13139942 -90355032 - LTR40a LTR ERVL -355 164 7 1 685 619 287 187 57 chr15 13140015 13140433 -90354541 + MLT2B2 LTR ERVL 4 475 -40 1 685 228 135 0 0 chr15 13140446 13140483 -90354491 + (CATA)n Simple_repeat Simple_repeat 3 39 0 1 685 216 0 0 0 chr15 13140731 13140755 -90354219 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 685 225 0 0 0 chr15 13141321 13141346 -90353628 + (T)n Simple_repeat Simple_repeat 1 25 0 1 685 222 200 0 0 chr15 13142074 13142114 -90352860 + CT-rich Low_complexity Low_complexity 2 41 0 1 685 3472 115 19 32 chr15 13142772 13143303 -90351671 - RLTR28 LTR ERVL 0 524 1 1 685 595 353 67 10 chr15 13143738 13144036 -90350938 + L3 LINE CR1 3449 3763 -726 1 685 25 0 0 0 chr15 13144262 13144287 -90350687 + AT_rich Low_complexity Low_complexity 1 25 0 1 685 315 49 0 0 chr15 13144782 13144823 -90350151 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 685 256 277 8 32 chr15 13144860 13144919 -90350055 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 685 514 0 30 0 chr15 13144919 13144985 -90349989 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 2 685 256 277 8 32 chr15 13144985 13145048 -90349926 + (TA)n Simple_repeat Simple_repeat 2 65 0 2 685 630 297 122 27 chr15 13145079 13145342 -90349632 + B4A SINE B4 5 292 0 2 685 2854 70 0 0 chr15 13145364 13145705 -90349269 + L1_Mus2 LINE L1 6225 6565 -1 2 685 399 21 0 0 chr15 13145896 13145944 -90349030 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 685 712 304 84 4 chr15 13146115 13146340 -90348634 - Tigger5 DNA MER2_type -2162 244 2 2 685 393 22 0 0 chr15 13147930 13147976 -90346998 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 685 1078 82 13 0 chr15 13150135 13150294 -90344680 + (TC)n Simple_repeat Simple_repeat 2 162 0 2 685 210 37 0 0 chr15 13150306 13150333 -90344641 + (CAGAGA)n Simple_repeat Simple_repeat 3 29 0 2 685 456 227 0 0 chr15 13150534 13150631 -90344343 - ID_B1 SINE B4 0 224 128 2 685 1550 250 40 183 chr15 13151373 13152044 -90342930 + RMER15 LTR ERVL 1 575 0 2 685 246 330 73 0 chr15 13152420 13152529 -90342445 - MIRc SINE MIR -105 163 47 2 685 297 310 63 35 chr15 13153370 13153544 -90341430 + L1M5 LINE L1 5637 5815 -309 2 685 34 24 0 0 chr15 13153600 13153641 -90341333 + AT_rich Low_complexity Low_complexity 1 41 0 2 685 965 178 0 0 chr15 13154642 13154788 -90340186 + B1_Mus2 SINE Alu 2 147 0 2 685 222 62 0 0 chr15 13155266 13155298 -90339676 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 2 685 719 293 102 52 chr15 13155323 13155726 -90339248 - Lx9 LINE L1 -22 7622 7200 2 685 1006 78 39 0 chr15 13156061 13156190 -90338784 + B1_Mus1 SINE Alu 4 137 -11 2 685 1452 64 0 0 chr15 13156219 13156564 -90338410 + (CCA)n Simple_repeat Simple_repeat 1 345 0 2 685 219 233 32 48 chr15 13156672 13156735 -90338239 - MIRm SINE MIR -123 153 92 2 685 406 345 26 82 chr15 13157033 13157336 -90337638 - B4A SINE B4 -4 288 3 2 685 323 136 100 17 chr15 13157520 13157580 -90337394 + HAL1-3A_ME LINE L1 1969 2033 -825 2 685 200 128 0 71 chr15 13159276 13159318 -90335656 + A-rich Low_complexity Low_complexity 3 41 0 2 685 599 287 39 47 chr15 13159468 13159702 -90335272 - Lx8 LINE L1 -3 7470 7239 2 685 1020 40 0 0 chr15 13159711 13159837 -90335137 + ORR1A1-int LTR MaLR 1172 1297 -495 2 685 2716 34 14 3 chr15 13159836 13160192 -90334782 - ORR1A1-int LTR MaLR -267 1525 1166 2 685 671 176 176 0 chr15 13160588 13160713 -90334261 + B1_Mur3 SINE Alu 1 147 -2 2 685 291 114 0 0 chr15 13161569 13161613 -90333361 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 685 327 259 92 48 chr15 13161978 13162143 -90332831 + MIRc SINE MIR 57 225 -43 2 685 441 0 0 0 chr15 13162349 13162398 -90332576 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 685 21 36 0 0 chr15 13163030 13163058 -90331916 + AT_rich Low_complexity Low_complexity 1 28 0 2 685 615 267 42 37 chr15 13163377 13163557 -90331417 + B3 SINE B2 2 179 -37 2 685 540 0 0 0 chr15 13163557 13163617 -90331357 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 685 615 267 42 37 chr15 13163617 13163650 -90331324 + B3 SINE B2 180 215 -1 2 685 216 135 0 0 chr15 13164775 13164812 -90330162 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 2 685 1248 288 97 32 chr15 13166357 13166863 -90328111 + MER82 DNA MER2_type 6 544 -109 2 685 390 192 121 0 chr15 13167249 13167348 -90327626 - B1_Mur3 SINE Alu 0 149 39 2 685 504 233 0 0 chr15 13167349 13168023 -90326951 + CT-rich Low_complexity Low_complexity 1 674 0 2 685 268 262 0 0 chr15 13168024 13168085 -90326889 - B4A SINE B4 -150 142 82 2 685 426 200 424 7 chr15 13168145 13168296 -90326678 - B3 SINE B2 -1 215 2 2 685 270 0 0 0 chr15 13168343 13168373 -90326601 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 2 685 1280 257 40 122 chr15 13168861 13169313 -90325661 + MTD LTR MaLR 5 419 0 2 685 451 279 20 7 chr15 13169782 13169930 -90325044 + (CATA)n Simple_repeat Simple_repeat 4 153 0 2 685 285 169 0 0 chr15 13171347 13171430 -90323544 + (TG)n Simple_repeat Simple_repeat 2 84 0 2 685 806 176 96 0 chr15 13171718 13171854 -90323120 + B1_Mur4 SINE Alu 2 150 0 2 685 762 156 0 0 chr15 13171858 13171993 -90322981 + GA-rich Low_complexity Low_complexity 3 137 0 2 685 3606 101 4 0 chr15 13171996 13172471 -90322503 + L1_Mus3 LINE L1 6155 6631 -7 2 685 519 60 0 0 chr15 13172476 13172543 -90322431 + (GAAA)n Simple_repeat Simple_repeat 3 69 0 2 685 213 242 0 0 chr15 13172547 13172580 -90322394 + ID_B1 SINE B4 83 115 -109 2 685 228 197 63 101 chr15 13172645 13172724 -90322250 + B4 SINE B4 2 77 -215 2 685 811 217 32 43 chr15 13172653 13172841 -90322133 + B3A SINE B2 7 192 -6 2 685 399 41 0 0 chr15 13172932 13172981 -90321993 + (CAT)n Simple_repeat Simple_repeat 1 49 0 2 685 275 260 19 28 chr15 13173164 13173271 -90321703 + GA-rich Low_complexity Low_complexity 3 108 0 2 685 1008 181 162 0 chr15 13173431 13173647 -90321327 + RMER1B Other Other 807 1057 -9 2 685 22 0 0 0 chr15 13173650 13173672 -90321302 + AT_rich Low_complexity Low_complexity 1 22 0 2 685 465 188 0 36 chr15 13173692 13173775 -90321199 + ID4 SINE ID 4 83 0 2 685 513 0 0 0 chr15 13174880 13174937 -90320037 + (CAAAC)n Simple_repeat Simple_repeat 3 59 0 2 685 219 255 0 0 chr15 13176966 13177013 -90317961 - ID4 SINE ID -4 79 33 2 685 32 57 0 0 chr15 13177048 13177101 -90317873 + AT_rich Low_complexity Low_complexity 1 53 0 2 685 410 270 72 84 chr15 13177448 13177614 -90317360 + RSINE1 SINE B4 2 165 0 2 685 288 391 120 56 chr15 13178010 13178403 -90316571 + LTR78 LTR ERV1 469 886 -418 2 685 237 298 163 13 chr15 13178605 13178758 -90316216 + LTR78 LTR ERV1 1035 1210 -94 2 685 2962 156 106 42 chr15 13178804 13178894 -90316080 - RMER4B LTR ERVK 0 585 501 2 685 599 67 11 0 chr15 13178894 13178983 -90315991 + (GA)n Simple_repeat Simple_repeat 1 90 0 2 685 2962 156 106 42 chr15 13178983 13179442 -90315532 - RMER4B LTR ERVK -85 500 2 2 685 649 279 87 38 chr15 13179454 13179741 -90315233 - Lx8 LINE L1 0 7473 7173 2 685 414 336 0 0 chr15 13179728 13179862 -90315112 + Lx7 LINE L1 6973 7106 -590 2 685 278 0 54 0 chr15 13180359 13180396 -90314578 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 2 685 4875 180 41 4 chr15 13180453 13182063 -90312911 - Lx4A LINE L1 -203 6797 5086 2 685 1308 191 36 4 chr15 13182060 13182338 -90312636 - Lx4A LINE L1 -5918 1168 882 2 685 261 283 0 0 chr15 13184480 13184540 -90310434 + MIR SINE MIR 88 147 -61 2 685 608 48 24 0 chr15 13185180 13185263 -90309711 + (TTCC)n Simple_repeat Simple_repeat 2 86 0 2 685 622 335 0 6 chr15 13185264 13185447 -90309527 + MLT1A LTR MaLR 192 373 -1 2 685 295 143 71 12 chr15 13185724 13185809 -90309165 + (TATAA)n Simple_repeat Simple_repeat 4 93 0 2 685 269 367 61 83 chr15 13188163 13188239 -90306735 + LTR88c LTR Genie? 44 267 -595 2 685 285 384 20 46 chr15 13188239 13188392 -90306582 + LTR88b LTR Gypsy? 109 257 -580 2 685 531 252 7 103 chr15 13188987 13189022 -90305952 - B1F2 SINE Alu 0 149 122 2 685 743 132 0 0 chr15 13189022 13189136 -90305838 + Lx LINE L1 6527 6640 -14 2 685 438 20 0 0 chr15 13189136 13189187 -90305787 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 685 531 252 7 103 chr15 13189187 13189305 -90305669 - B1F2 SINE Alu -28 121 11 2 685 218 376 12 12 chr15 13189232 13189318 -90305656 - B4A SINE B4 -125 167 82 2 685 367 290 9 36 chr15 13189314 13189425 -90305549 - PB1D10 SINE Alu 0 117 10 2 685 315 0 0 0 chr15 13189469 13189504 -90305470 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2 685 8177 38 6 11 chr15 13189506 13190546 -90304428 - L1Md_F2 LINE L1 -19 6563 5526 2 685 273 355 9 18 chr15 13190742 13190854 -90304120 - MER20 DNA MER1_type -6 213 103 2 685 751 246 62 37 chr15 13190855 13191176 -90303798 + RLTR15 LTR ERVK 1 329 -30 2 685 203 239 22 0 chr15 13192342 13192388 -90302586 + CT-rich Low_complexity Low_complexity 4 50 0 2 685 25 31 0 0 chr15 13193788 13193820 -90301154 + AT_rich Low_complexity Low_complexity 1 32 0 2 685 639 88 0 0 chr15 13193940 13194031 -90300943 + (TG)n Simple_repeat Simple_repeat 1 91 0 2 685 590 298 138 8 chr15 13194091 13194345 -90300629 - B4A SINE B4 -4 288 2 2 685 293 155 0 17 chr15 13194427 13194486 -90300488 + CT-rich Low_complexity Low_complexity 4 61 0 2 685 1758 75 0 13 chr15 13194486 13194716 -90300258 - L1Md_F2 LINE L1 0 6582 6356 2 685 276 30 0 0 chr15 13194716 13194749 -90300225 + L1_Mus1 LINE L1 6313 6345 -222 2 685 418 308 56 7 chr15 13195136 13195280 -90299694 + L2a LINE L2 2672 2822 -597 2 685 804 283 96 77 chr15 13195531 13195895 -90299079 - MTEa LTR MaLR 0 379 9 2 685 540 331 57 85 chr15 13196005 13196358 -90298616 + MLT1A LTR MaLR 13 355 -19 2 685 297 235 66 7 chr15 13196846 13196932 -90298042 + L2a LINE L2 3284 3421 -5 2 685 5042 226 68 52 chr15 13196940 13197503 -90297471 + Lx6 LINE L1 6090 6684 -776 2 685 234 250 21 0 chr15 13197503 13197551 -90297423 + RMER13B LTR ERVK 645 693 -215 2 685 5042 226 68 52 chr15 13197551 13197985 -90296989 + Lx6 LINE L1 6685 7144 -316 2 685 5110 38 10 2 chr15 13197985 13198565 -90296409 - L1Md_F3 LINE L1 -1 6583 5999 2 685 5042 226 68 52 chr15 13198565 13198703 -90296271 + Lx6 LINE L1 7145 7291 -169 2 685 216 0 0 0 chr15 13198914 13198938 -90296036 + (T)n Simple_repeat Simple_repeat 1 24 0 2 685 24 0 0 0 chr15 13199083 13199107 -90295867 + AT_rich Low_complexity Low_complexity 1 24 0 2 685 229 26 26 26 chr15 13199137 13199176 -90295798 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2 685 454 294 102 43 chr15 13199873 13200166 -90294808 + ORR1E LTR MaLR 38 364 -15 2 685 1145 289 67 13 chr15 13200205 13200577 -90294397 + MTE-int LTR MaLR 49 440 -1140 3 685 301 237 137 21 chr15 13200614 13200709 -90294265 + MT2B LTR ERVL 152 257 -344 3 685 696 124 9 26 chr15 13200640 13200756 -90294218 + B1_Mus1 SINE Alu 35 148 0 3 685 480 37 24 36 chr15 13200774 13200858 -90294116 + (CAAAC)n Simple_repeat Simple_repeat 2 84 0 3 685 1937 332 98 40 chr15 13200866 13201907 -90293067 + MTE-int LTR MaLR 454 1554 -26 3 685 259 196 39 0 chr15 13202147 13202198 -90292776 + ORR1E LTR MaLR 327 379 0 2 685 521 306 49 20 chr15 13202308 13202555 -90292419 + MER112 DNA MER1_type 6 259 -2 3 685 248 316 0 0 chr15 13202817 13202893 -90292081 + (CA)n Simple_repeat Simple_repeat 1 76 0 3 685 3919 236 67 58 chr15 13203107 13203574 -90291400 - Lx6 LINE L1 -7 7453 6979 3 685 3828 95 8 6 chr15 13203574 13204074 -90290900 - L1_Mus4 LINE L1 -6 6630 6130 3 685 3919 236 67 58 chr15 13204074 13204674 -90290300 - Lx6 LINE L1 -482 6978 6377 3 685 673 326 0 0 chr15 13206507 13206679 -90288295 - MER5B DNA MER1_type 0 178 7 3 685 198 118 0 0 chr15 13207856 13207890 -90287084 + (TCTG)n Simple_repeat Simple_repeat 2 35 0 3 685 503 124 0 22 chr15 13207893 13207984 -90286990 + (TCCC)n Simple_repeat Simple_repeat 1 89 0 3 685 478 268 144 5 chr15 13208697 13208892 -90286082 - L1ME3B LINE L1 -364 5876 5655 3 685 192 97 0 0 chr15 13209557 13209588 -90285386 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 3 685 1199 88 0 0 chr15 13209588 13209735 -90285239 - B1_Mus1 SINE Alu 0 148 2 3 685 1150 281 101 42 chr15 13209760 13209881 -90285093 - Lx8 LINE L1 0 7473 7330 3 685 264 30 0 0 chr15 13209881 13209914 -90285060 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 3 685 1150 281 101 42 chr15 13209914 13210267 -90284707 - Lx8 LINE L1 -144 7329 6971 3 685 378 0 0 0 chr15 13210283 13210325 -90284649 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 685 2357 254 22 40 chr15 13210361 13211006 -90283968 + Lx8 LINE L1 6303 6935 -538 3 685 237 345 43 17 chr15 13211586 13211701 -90283273 - Charlie17a DNA MER1_type -101 118 1 3 685 241 102 20 39 chr15 13212626 13212677 -90282297 + (TATATG)n Simple_repeat Simple_repeat 1 50 0 3 685 510 352 92 17 chr15 13214192 13214432 -90280542 + MLT1I LTR MaLR 26 283 -128 3 685 1402 90 0 26 chr15 13214521 13214715 -90280259 - B2_Mm2 SINE B2 -6 189 1 3 685 287 183 28 0 chr15 13214815 13214886 -90280088 + (CATA)n Simple_repeat Simple_repeat 4 76 0 3 685 192 97 0 0 chr15 13214897 13214928 -90280046 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 3 685 820 282 28 0 chr15 13215185 13215401 -90279573 - MER58A DNA MER1_type -2 222 1 3 685 486 0 0 0 chr15 13216333 13216387 -90278587 + (TTTC)n Simple_repeat Simple_repeat 2 55 0 3 685 464 328 103 31 chr15 13216609 13216870 -90278104 + MLT1A0 LTR MaLR 1 280 -85 3 685 1035 293 113 32 chr15 13217012 13217474 -90277500 + MLT1D LTR MaLR 3 501 -4 3 685 2078 184 39 16 chr15 13219743 13220174 -90274800 - RMER10A LTR ERVL -1 441 1 3 685 216 97 0 0 chr15 13220417 13220448 -90274526 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 3 685 208 292 0 53 chr15 13221083 13221159 -90273815 + CT-rich Low_complexity Low_complexity 2 73 0 3 685 348 335 182 20 chr15 13221266 13221375 -90273599 - RMER15 LTR ERVL -14 561 421 3 685 312 27 0 0 chr15 13221375 13221412 -90273562 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 685 348 335 182 20 chr15 13221412 13221549 -90273425 - RMER15 LTR ERVL -155 420 275 3 685 565 324 47 43 chr15 13221549 13221567 -90273407 - RMER15-int LTR ERVL -553 4446 4428 3 685 933 9 0 0 chr15 13221567 13221673 -90273301 + (TTC)n Simple_repeat Simple_repeat 3 108 0 3 685 565 324 47 43 chr15 13221673 13221912 -90273062 - RMER15-int LTR ERVL -572 4427 4188 3 685 253 333 71 82 chr15 13222039 13222222 -90272752 - RMER15-int LTR ERVL -3088 1911 1731 3 685 932 197 33 4 chr15 13222226 13222471 -90272503 + RMER17C LTR ERVK 1 252 -158 3 685 1177 199 15 15 chr15 13222447 13222773 -90272201 + RMER17C LTR ERVK 85 410 0 3 685 1820 267 89 13 chr15 13222821 13223810 -90271164 - RMER15-int LTR ERVL -3358 1641 578 3 685 1675 155 47 58 chr15 13223812 13224251 -90270723 + RMER17C LTR ERVK 7 439 -519 3 685 252 0 0 0 chr15 13227637 13227665 -90267309 + (T)n Simple_repeat Simple_repeat 1 28 0 3 685 903 230 43 55 chr15 13227723 13227976 -90266998 + B4A SINE B4 2 251 -41 3 685 504 0 0 0 chr15 13229382 13229438 -90265536 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 3 685 360 0 0 0 chr15 13229701 13229741 -90265233 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 685 537 16 0 0 chr15 13229741 13229802 -90265172 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 685 1882 63 0 12 chr15 13229864 13229883 -90265091 + L1_Mus1 LINE L1 6141 6157 -410 3 685 1323 42 36 0 chr15 13229883 13230051 -90264923 - L1_Mus2 LINE L1 0 6566 6393 3 685 1882 63 0 12 chr15 13230051 13230288 -90264686 + L1_Mus2 LINE L1 6158 6394 -173 3 685 2084 63 91 0 chr15 13230333 13230619 -90264355 - L1_Mus1 LINE L1 -6 6561 6250 3 685 627 301 28 0 chr15 13232514 13232690 -90262284 - MER5A DNA MER1_type -6 183 3 3 685 1239 249 62 11 chr15 13233647 13234000 -90260974 - ORR1D1 LTR MaLR -1 373 3 3 685 208 121 0 0 chr15 13236553 13236586 -90258388 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 685 4529 51 3 5 chr15 13236789 13237363 -90257611 - L1Md_F2 LINE L1 -3 6579 6007 3 685 263 343 58 17 chr15 13237468 13237640 -90257334 + ORR1E LTR MaLR 9 187 -172 3 685 350 260 60 33 chr15 13238028 13238179 -90256795 + Charlie5 DNA MER1_type 2444 2598 -26 3 686 24 0 0 0 chr15 13239777 13239801 -90255173 + AT_rich Low_complexity Low_complexity 1 24 0 3 686 524 294 52 9 chr15 13239810 13240023 -90254951 + Lx8 LINE L1 6888 7109 -364 3 686 441 0 0 0 chr15 13240049 13240098 -90254876 + (TC)n Simple_repeat Simple_repeat 1 49 0 3 686 273 57 0 0 chr15 13240098 13240132 -90254842 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 686 523 332 57 90 chr15 13240322 13240676 -90254298 + ORR1E LTR MaLR 8 349 -10 3 686 243 303 40 0 chr15 13240943 13241019 -90253955 + BC1_Mm scRNA scRNA 1 79 -73 3 686 795 206 152 99 chr15 13241686 13242041 -90252933 + ORR1D1 LTR MaLR 1 374 0 3 686 1521 213 151 22 chr15 13242439 13242809 -90252165 + MTD LTR MaLR 1 418 -1 3 686 775 158 67 0 chr15 13245247 13245367 -90249607 + B3 SINE B2 2 129 -87 3 686 21 57 0 0 chr15 13245485 13245520 -90249454 + AT_rich Low_complexity Low_complexity 1 35 0 3 686 848 128 0 22 chr15 13245846 13246029 -90248945 + CT-rich Low_complexity Low_complexity 1 179 0 3 686 1329 96 17 0 chr15 13246035 13246213 -90248761 - B2_Mm2 SINE B2 -14 181 1 3 686 289 297 0 71 chr15 13246508 13246606 -90248368 - ID_B1 SINE B4 0 224 134 3 686 220 321 113 52 chr15 13246606 13246622 -90248352 - B1F SINE Alu -1 147 27 3 686 410 143 61 7 chr15 13246942 13247090 -90247884 + (TCTA)n Simple_repeat Simple_repeat 2 157 0 3 686 1311 226 81 42 chr15 13247123 13247455 -90247519 + MLT1E LTR MaLR 306 650 -3 3 686 484 165 12 0 chr15 13247740 13247825 -90247149 + B1_Mur4 SINE Alu 65 150 0 3 686 195 284 77 14 chr15 13251146 13251295 -90243679 + MIRb SINE MIR 108 268 0 3 686 229 314 121 0 chr15 13251360 13251484 -90243490 + L3 LINE CR1 4348 4486 -3 3 686 224 383 43 17 chr15 13252530 13252647 -90242327 - L2b LINE L2 0 3375 3256 3 686 1347 281 32 32 chr15 13254926 13255360 -90239614 - LTR40b LTR ERVL -18 444 11 3 686 651 285 63 16 chr15 13255693 13255882 -90239092 + ID_B1 SINE B4 6 203 -21 3 686 293 314 126 8 chr15 13255779 13255898 -90239076 + B1_Mus2 SINE Alu 10 142 -5 3 686 591 318 60 0 chr15 13255904 13256055 -90238919 + RSINE1 SINE B4 4 163 -2 3 686 701 222 6 0 chr15 13256065 13256236 -90238738 + (TA)n Simple_repeat Simple_repeat 1 172 0 3 686 465 241 3 0 chr15 13257606 13257956 -90237018 + (CA)n Simple_repeat Simple_repeat 1 351 0 3 686 245 264 8 0 chr15 13257995 13258116 -90236858 + (CA)n Simple_repeat Simple_repeat 1 122 0 3 686 300 53 0 0 chr15 13258651 13258689 -90236285 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 686 1445 64 21 0 chr15 13260133 13260321 -90234653 + B2_Mm2 SINE B2 2 193 -2 3 686 534 244 38 0 chr15 13260840 13260971 -90234003 + B1_Mur1 SINE Alu 1 136 -13 3 686 2262 125 65 8 chr15 13261907 13262279 -90232695 - Lx3B LINE L1 -5 6968 6576 3 686 268 342 27 8 chr15 13263307 13263428 -90231546 - L2c LINE L2 -7 3419 3273 3 686 281 30 0 0 chr15 13264130 13264163 -90230811 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 686 318 134 0 0 chr15 13264163 13264230 -90230744 + (TC)n Simple_repeat Simple_repeat 2 68 0 3 686 251 269 230 37 chr15 13264235 13264370 -90230604 - RSINE1 SINE B4 -2 163 3 3 686 1653 222 83 5 chr15 13266333 13266705 -90228269 + MTD LTR MaLR 5 405 -14 3 686 652 210 16 0 chr15 13267153 13267277 -90227697 + B1_Mur1 SINE Alu 12 137 -12 3 686 1460 201 3 0 chr15 13267675 13267963 -90227011 + Lx9 LINE L1 7058 7346 -298 3 686 608 75 32 0 chr15 13268401 13268494 -90226480 + (TTTTG)n Simple_repeat Simple_repeat 2 97 0 3 686 30729 85 11 0 chr15 13269080 13274214 -90220760 + L1Md_F2 LINE L1 392 5585 -298 3 686 7304 81 3 13 chr15 13274215 13275209 -90219765 + L1Md_F2 LINE L1 5587 6570 -12 3 686 304 212 15 0 chr15 13275229 13275295 -90219679 - Tigger14a DNA MER2_type -179 145 79 3 686 557 315 35 0 chr15 13275430 13275573 -90219401 + B3A SINE B2 3 150 -48 3 686 756 209 27 25 chr15 13276059 13276284 -90218690 - Lx7 LINE L1 -740 6956 6719 3 686 22 0 0 0 chr15 13276285 13276307 -90218667 + AT_rich Low_complexity Low_complexity 1 22 0 3 686 244 333 20 0 chr15 13276367 13276469 -90218505 + Lx7 LINE L1 7193 7296 -400 3 686 783 83 0 0 chr15 13276502 13276610 -90218364 + (TTCC)n Simple_repeat Simple_repeat 3 110 0 3 686 1109 191 34 86 chr15 13276616 13276650 -90218324 + RMER17C LTR ERVK 80 114 -296 3 686 1084 117 0 16 chr15 13276650 13276833 -90218141 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 686 1109 191 34 86 chr15 13276833 13277147 -90217827 + RMER17C LTR ERVK 115 410 0 3 686 833 133 21 43 chr15 13277147 13277204 -90217770 - ORR1A3 LTR MaLR -34 292 241 3 686 2861 58 0 0 chr15 13277204 13277550 -90217424 - ORR1A1 LTR MaLR 0 346 1 3 686 833 133 21 43 chr15 13277550 13277633 -90217341 - ORR1A3 LTR MaLR -86 240 155 3 686 720 79 0 203 chr15 13277639 13277861 -90217113 - Lx2A LINE L1 0 7008 6832 3 686 858 149 7 0 chr15 13277861 13278002 -90216972 - ORR1A3 LTR MaLR -184 142 1 3 686 324 236 154 0 chr15 13278238 13278348 -90216626 + MER53 DNA hAT 1 127 -66 3 686 261 0 0 0 chr15 13279011 13279040 -90215934 + (TTAA)n Simple_repeat Simple_repeat 1 29 0 4 686 565 252 16 0 chr15 13279040 13279163 -90215811 - B1F2 SINE Alu -14 135 11 4 686 225 0 0 0 chr15 13280764 13280789 -90214185 + (TTG)n Simple_repeat Simple_repeat 3 27 0 4 686 469 301 7 22 chr15 13281421 13281557 -90213417 + ID_B1 SINE B4 90 223 -1 4 686 30 45 0 0 chr15 13282983 13283027 -90211947 + AT_rich Low_complexity Low_complexity 1 44 0 4 686 4411 84 2 9 chr15 13283224 13283862 -90211112 - L1_Mus2 LINE L1 -2 5881 5249 4 686 1893 65 11 4 chr15 13283860 13284123 -90210851 + L1_Mus2 LINE L1 5904 6168 -398 4 686 2375 87 5 231 chr15 13284133 13284749 -90210225 - RLTR44C LTR ERVK -25 477 1 4 686 2273 83 3 3 chr15 13284749 13285063 -90209911 + L1_Mus2 LINE L1 6162 6475 -91 4 686 213 65 0 0 chr15 13285197 13285228 -90209746 + (A)n Simple_repeat Simple_repeat 1 31 0 4 686 831 21 0 0 chr15 13285619 13285716 -90209258 + (CA)n Simple_repeat Simple_repeat 2 98 0 4 686 361 302 93 0 chr15 13286389 13286518 -90208456 + B1F2 SINE Alu 1 141 -8 4 686 2165 126 0 3 chr15 13286529 13286848 -90208126 + ORR1A3 LTR MaLR 1 318 -8 4 686 189 0 0 0 chr15 13287319 13287340 -90207634 + (TAAAAA)n Simple_repeat Simple_repeat 1 21 0 4 686 516 316 11 50 chr15 13287915 13288095 -90206879 + MER45C DNA Tip100 36 208 -745 4 686 305 261 43 0 chr15 13288354 13288423 -90206551 + MER45C DNA Tip100 880 951 -2 4 686 878 201 73 11 chr15 13288753 13289111 -90205863 - Lx5 LINE L1 -3 7047 6632 4 686 196 289 39 0 chr15 13289486 13289538 -90205436 - L2b LINE L2 -5 3370 3317 4 686 522 337 85 25 chr15 13289642 13289995 -90204979 + MLT1A LTR MaLR 1 374 0 4 686 300 256 206 40 chr15 13290312 13290487 -90204487 - MIRb SINE MIR -41 227 24 4 686 765 325 92 6 chr15 13291569 13291894 -90203080 - MLT1B LTR MaLR -7 383 31 4 686 387 89 0 0 chr15 13292171 13292227 -90202747 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 686 726 297 11 49 chr15 13292229 13292516 -90202458 - B4A SINE B4 -14 278 3 4 686 23 0 0 0 chr15 13292576 13292599 -90202375 + AT_rich Low_complexity Low_complexity 1 23 0 4 686 2594 86 0 0 chr15 13292599 13292937 -90202037 - L1_Mus1 LINE L1 0 6567 6230 4 686 3702 70 0 2 chr15 13292937 13293435 -90201539 + L1_Mus1 LINE L1 5717 6213 -354 4 686 279 0 0 0 chr15 13294036 13294067 -90200907 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 4 686 731 155 83 51 chr15 13294067 13294223 -90200751 - B2_Mm2 SINE B2 -34 161 1 4 686 965 311 47 71 chr15 13294959 13295426 -90199548 - MER31B LTR ERV1 0 466 11 4 686 381 287 14 42 chr15 13295889 13296031 -90198943 - ID_B1 SINE B4 -6 218 81 4 686 270 136 0 0 chr15 13297607 13297651 -90197323 + (T)n Simple_repeat Simple_repeat 1 44 0 4 686 308 318 52 0 chr15 13299042 13299215 -90195759 + B3A SINE B2 1 182 -16 4 686 204 167 0 23 chr15 13299352 13299395 -90195579 + T-rich Low_complexity Low_complexity 2 43 0 4 686 518 92 0 26 chr15 13300444 13300582 -90194392 - L1_Mus1 LINE L1 0 6582 6495 4 686 355 367 53 33 chr15 13300904 13301149 -90193825 + L2 LINE L2 2286 2535 -884 4 686 236 385 15 15 chr15 13301161 13301293 -90193681 + L2 LINE L2 2951 3082 -337 4 686 501 326 24 86 chr15 13301523 13301778 -90193196 + RMER15 LTR ERVL 325 563 -12 4 686 400 397 119 16 chr15 13302378 13302764 -90192210 + L2 LINE L2 2643 3068 -351 4 686 203 242 58 43 chr15 13304242 13304311 -90190663 - L3 LINE CR1 -174 4315 4246 4 686 7659 73 7 3 chr15 13306715 13307851 -90187123 + L1_Mus4 LINE L1 5498 6636 0 4 686 472 295 8 0 chr15 13308294 13308416 -90186558 + ID_B1 SINE B4 84 206 -18 4 686 267 371 86 19 chr15 13308687 13308896 -90186078 + MIR SINE MIR 36 258 -4 4 686 497 329 28 40 chr15 13310227 13310404 -90184570 - B4A SINE B4 -117 175 1 4 686 255 245 0 0 chr15 13310925 13310978 -90183996 - L2 LINE L2 -1037 2382 2330 4 686 359 89 18 0 chr15 13311442 13311498 -90183476 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 686 21 0 0 0 chr15 13311519 13311540 -90183434 + AT_rich Low_complexity Low_complexity 1 21 0 4 686 729 296 5 34 chr15 13312045 13312251 -90182723 - MER34 LTR ERV1 -8 534 335 4 686 773 162 0 13 chr15 13312402 13312552 -90182422 + GA-rich Low_complexity Low_complexity 3 150 0 4 686 224 288 0 0 chr15 13312648 13312707 -90182267 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 686 1144 229 100 100 chr15 13312989 13313122 -90181852 - ORR1D1 LTR MaLR -1 373 245 4 686 1300 25 0 25 chr15 13313122 13313368 -90181606 + (CAGG)n Simple_repeat Simple_repeat 1 239 0 4 686 1144 229 100 100 chr15 13313368 13313403 -90181571 - ORR1D1 LTR MaLR -130 244 225 4 686 1072 4 69 0 chr15 13313403 13313650 -90181324 + (CAGGG)n Simple_repeat Simple_repeat 1 263 0 4 686 1144 229 100 100 chr15 13313650 13313701 -90181273 - ORR1D1 LTR MaLR -150 224 179 4 686 1193 83 0 6 chr15 13313701 13313882 -90181092 + (GA)n Simple_repeat Simple_repeat 1 180 0 4 686 1144 229 100 100 chr15 13313882 13314015 -90180959 - ORR1D1 LTR MaLR -196 178 16 4 686 6454 219 71 36 chr15 13315499 13317327 -90177647 - Lx7 LINE L1 -16 7680 5789 4 686 606 63 0 0 chr15 13317329 13317408 -90177566 + (TC)n Simple_repeat Simple_repeat 2 80 0 4 686 13255 178 64 29 chr15 13317556 13318857 -90176117 - L1_Mur3 LINE L1 -90 5790 4416 4 686 207 0 0 0 chr15 13318857 13318880 -90176094 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 686 13255 178 64 29 chr15 13318880 13320921 -90174053 - L1_Mur3 LINE L1 -1465 4415 2333 4 686 257 25 75 0 chr15 13321417 13321457 -90173517 + (TTTTTG)n Simple_repeat Simple_repeat 4 46 0 4 686 346 269 34 34 chr15 13321458 13321604 -90173370 - B1F2 SINE Alu -1 148 3 4 686 746 262 21 31 chr15 13321798 13322086 -90172888 - L1MA4 LINE L1 -353 5959 5677 4 686 21 36 0 0 chr15 13322526 13322554 -90172420 + AT_rich Low_complexity Low_complexity 1 28 0 4 686 836 250 5 67 chr15 13324168 13324391 -90170583 + MTEa LTR MaLR 7 215 -164 4 686 480 281 70 57 chr15 13324404 13324702 -90170272 - L1MD3 LINE L1 -274 7721 7420 4 686 378 257 114 63 chr15 13324818 13325025 -90169949 + MLT1B LTR MaLR 100 306 -161 4 686 288 53 0 0 chr15 13325629 13325667 -90169307 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 686 219 178 53 27 chr15 13326156 13326231 -90168743 + (CATATA)n Simple_repeat Simple_repeat 6 82 0 4 686 522 31 0 0 chr15 13326235 13326299 -90168675 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 686 2964 121 13 11 chr15 13326849 13327309 -90167665 - Lx3B LINE L1 -2 6971 6511 4 686 674 54 11 0 chr15 13327718 13327779 -90167195 + (TC)n Simple_repeat Simple_repeat 1 62 0 4 686 790 83 0 16 chr15 13327779 13327901 -90167073 + (TTC)n Simple_repeat Simple_repeat 3 122 0 4 686 674 54 11 0 chr15 13327901 13327932 -90167042 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 686 6465 57 2 2 chr15 13327981 13328826 -90166148 + L1Md_F2 LINE L1 392 1236 -5380 4 686 8499 67 8 1 chr15 13331998 13333171 -90161803 + L1Md_F2 LINE L1 4405 5585 -298 4 686 7924 47 10 3 chr15 13333172 13334161 -90160813 + L1Md_F2 LINE L1 5587 6582 0 4 686 237 259 72 57 chr15 13334425 13334545 -90160429 - MTEa LTR MaLR -41 338 202 4 686 1718 57 93 4 chr15 13334756 13335004 -90159970 - L1_Mus2 LINE L1 -107 6459 6190 4 686 713 64 18 0 chr15 13335004 13335114 -90159860 + L1_Mus2 LINE L1 6452 6563 -3 4 686 4607 114 46 17 chr15 13335211 13335935 -90159039 + Lx3C LINE L1 6222 6966 -10 4 686 353 217 106 62 chr15 13336463 13336576 -90158398 - PB1D9 SINE Alu 0 120 3 4 686 253 236 28 19 chr15 13336586 13336694 -90158280 + (TA)n Simple_repeat Simple_repeat 2 110 0 4 686 21 0 0 0 chr15 13336717 13336738 -90158236 + AT_rich Low_complexity Low_complexity 1 21 0 4 686 2916 82 23 3 chr15 13337062 13337454 -90157520 - MTB LTR MaLR 0 400 1 4 686 356 258 52 0 chr15 13337491 13337588 -90157386 + Tigger5 DNA MER2_type 95 196 -2210 4 686 244 324 139 0 chr15 13337609 13337717 -90157257 + Tigger5 DNA MER2_type 2284 2406 0 4 686 192 291 118 76 chr15 13338139 13338258 -90156716 + L3 LINE CR1 3484 3607 -882 4 686 390 291 2 21 chr15 13342454 13342618 -90152356 + L1MA9 LINE L1 5705 5935 -377 4 686 2141 144 3 78 chr15 13342818 13343201 -90151773 + ORR1B1 LTR MaLR 41 394 0 4 686 242 404 0 0 chr15 13343255 13343359 -90151615 + L1MA9 LINE L1 6200 6303 -1170 4 686 267 255 53 53 chr15 13343445 13343615 -90151359 + Lx8 LINE L1 7302 7471 -2 4 686 226 399 58 7 chr15 13343662 13343816 -90151158 - MIR SINE MIR -80 182 21 4 686 357 186 0 0 chr15 13345090 13345160 -90149814 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 686 262 382 0 87 chr15 13345321 13345470 -90149504 + MamSINE1 SINE tRNA 112 247 -43 4 686 217 169 17 17 chr15 13345599 13345659 -90149315 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 686 387 113 161 9 chr15 13346530 13346642 -90148332 - B2_Mm2 SINE B2 -3 192 47 4 686 1272 58 58 0 chr15 13346685 13346856 -90148118 - B2_Mm2 SINE B2 -14 181 1 4 686 306 0 0 0 chr15 13347488 13347522 -90147452 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 4 686 27 0 0 0 chr15 13348073 13348100 -90146874 + AT_rich Low_complexity Low_complexity 1 27 0 4 686 446 120 13 0 chr15 13349019 13349094 -90145880 + (CA)n Simple_repeat Simple_repeat 2 77 0 4 686 26 30 0 0 chr15 13350247 13350280 -90144694 + AT_rich Low_complexity Low_complexity 1 33 0 4 686 208 242 0 70 chr15 13350514 13350585 -90144389 + T-rich Low_complexity Low_complexity 2 67 0 4 686 432 0 0 0 chr15 13350869 13350917 -90144057 + (CAA)n Simple_repeat Simple_repeat 1 48 0 4 686 339 78 0 0 chr15 13351980 13352031 -90142943 + (TTTA)n Simple_repeat Simple_repeat 4 54 0 4 686 319 346 93 0 chr15 13353040 13353202 -90141772 + MIR SINE MIR 8 184 -78 4 686 1398 262 32 24 chr15 13354185 13354557 -90140417 - MTE2b LTR MaLR -3 376 2 4 686 180 0 0 0 chr15 13354941 13354961 -90140013 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 686 323 329 13 13 chr15 13355840 13355917 -90139057 - ID4 SINE ID -4 79 3 4 686 350 327 0 0 chr15 13356566 13356670 -90138304 - MamGypLTR2c LTR Gypsy -957 111 8 4 686 248 115 58 0 chr15 13356962 13357014 -90137960 + Lx9 LINE L1 7585 7639 -5 4 686 23 33 0 0 chr15 13357014 13357044 -90137930 + AT_rich Low_complexity Low_complexity 1 30 0 4 686 7167 41 8 3 chr15 13357722 13358629 -90136345 - L1_Mus1 LINE L1 0 6567 5657 4 686 398 321 35 9 chr15 13358629 13358742 -90136232 - B3A SINE B2 -25 173 58 5 686 1793 253 105 45 chr15 13358753 13359182 -90135792 - MTD-int LTR MaLR -375 723 279 5 686 1014 123 88 0 chr15 13359182 13359353 -90135621 - B2_Mm2 SINE B2 -8 187 2 5 686 1793 236 109 42 chr15 13359353 13359617 -90135357 - MTD-int LTR MaLR -980 278 1 5 686 1592 228 93 48 chr15 13359617 13360013 -90134961 - MTD LTR MaLR 0 419 6 5 686 561 270 134 6 chr15 13361097 13361261 -90133713 + MTD LTR MaLR 101 285 -134 5 686 25 0 0 0 chr15 13361650 13361675 -90133299 + AT_rich Low_complexity Low_complexity 1 25 0 5 686 252 122 0 0 chr15 13361944 13361985 -90132989 + (CAT)n Simple_repeat Simple_repeat 1 41 0 5 686 1099 231 34 119 chr15 13362115 13362528 -90132446 - MTE2a LTR MaLR -1 378 1 5 686 255 61 0 0 chr15 13362721 13362754 -90132220 + (TA)n Simple_repeat Simple_repeat 1 33 0 5 686 240 381 102 15 chr15 13363154 13363359 -90131615 + MIRb SINE MIR 10 232 -36 5 686 334 281 99 49 chr15 13364473 13364615 -90130359 - LTR33B LTR ERVL -326 177 29 5 686 25 0 0 0 chr15 13364954 13364979 -90129995 + AT_rich Low_complexity Low_complexity 1 25 0 5 686 486 75 0 0 chr15 13365630 13365697 -90129277 + (TCTCTG)n Simple_repeat Simple_repeat 2 68 0 5 686 232 315 61 30 chr15 13366449 13366569 -90128405 - MIRb SINE MIR -50 158 35 5 686 333 0 0 0 chr15 13367414 13367451 -90127523 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 686 895 233 39 29 chr15 13367581 13367789 -90127185 + B3 SINE B2 1 210 -6 5 686 197 65 32 0 chr15 13367804 13367835 -90127139 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 686 214 320 56 37 chr15 13368044 13368151 -90126823 + L2 LINE L2 2789 2897 -522 5 686 671 0 13 0 chr15 13369054 13369133 -90125841 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 5 686 189 0 0 0 chr15 13369133 13369153 -90125821 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 687 207 0 0 0 chr15 13369370 13369393 -90125581 + (A)n Simple_repeat Simple_repeat 1 23 0 5 687 25 0 0 0 chr15 13370875 13370900 -90124074 + AT_rich Low_complexity Low_complexity 1 25 0 5 687 2255 115 19 38 chr15 13371009 13371379 -90123595 - Lx LINE L1 -6 6648 6286 5 687 198 0 0 0 chr15 13371400 13371422 -90123552 + (TTTTA)n Simple_repeat Simple_repeat 1 22 0 5 687 225 220 248 0 chr15 13371429 13371538 -90123436 - Lx5 LINE L1 -26 7434 7299 5 687 347 274 48 8 chr15 13371530 13371680 -90123294 - Lx5 LINE L1 -207 7253 7114 5 687 759 287 59 33 chr15 13371750 13371780 -90123194 - Lx5 LINE L1 -267 6783 6755 5 687 478 74 12 36 chr15 13371780 13371864 -90123110 - Lx LINE L1 -6 6648 6567 5 687 759 267 45 29 chr15 13371864 13372111 -90122863 - Lx5 LINE L1 -586 6874 6507 5 687 228 35 0 0 chr15 13374850 13374879 -90120095 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 5 687 2817 120 88 2 chr15 13375347 13375790 -90119184 + Lx2 LINE L1 6516 6996 -1 5 687 25 31 0 0 chr15 13376312 13376344 -90118630 + AT_rich Low_complexity Low_complexity 1 32 0 5 687 194 246 27 55 chr15 13377144 13377217 -90117757 + L3 LINE CR1 3788 3858 -631 5 687 332 278 0 94 chr15 13377969 13378553 -90116421 + (AGGTG)n Simple_repeat Simple_repeat 1 529 0 5 687 382 133 56 0 chr15 13378586 13378676 -90116298 + Lx9 LINE L1 7550 7644 0 5 687 1244 292 109 21 chr15 13378699 13379525 -90115449 + Lx8 LINE L1 6573 7471 -2 5 687 522 0 0 0 chr15 13379723 13379781 -90115193 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 687 514 197 15 0 chr15 13379848 13379985 -90114989 + (CA)n Simple_repeat Simple_repeat 2 140 0 5 687 1427 278 36 58 chr15 13381158 13381877 -90113097 - Lx9 LINE L1 -8 7636 6934 5 687 225 94 0 0 chr15 13382177 13382209 -90112765 + (A)n Simple_repeat Simple_repeat 1 32 0 5 687 553 279 50 77 chr15 13383052 13383067 -90111907 - B3 SINE B2 0 216 204 5 687 2108 66 51 14 chr15 13383067 13383360 -90111614 - L1Md_F2 LINE L1 0 6582 6279 5 687 650 279 50 77 chr15 13383360 13383565 -90111409 - B3A SINE B2 -13 203 2 5 687 215 313 71 12 chr15 13383958 13384042 -90110932 - MIRb SINE MIR -120 148 60 5 687 1331 75 21 26 chr15 13384172 13384364 -90110610 + B2_Mm1t SINE B2 1 191 -2 5 687 369 0 0 0 chr15 13385701 13385742 -90109232 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 687 333 376 75 11 chr15 13386275 13386463 -90108511 + MER20 DNA MER1_type 1 200 -19 5 687 622 204 152 23 chr15 13386700 13386823 -90108151 + MTD LTR MaLR 8 133 -286 5 687 324 0 0 0 chr15 13386823 13386859 -90108115 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 687 622 204 152 23 chr15 13386859 13386906 -90108068 + MTD LTR MaLR 134 200 -219 5 687 183 333 47 47 chr15 13387136 13387221 -90107753 + L2 LINE L2 950 1034 -2385 5 687 214 255 43 0 chr15 13387275 13387322 -90107652 - B1_Mus1 SINE Alu -99 49 1 5 687 519 222 41 51 chr15 13388373 13388568 -90106406 + MER53 DNA hAT 1 193 0 5 687 767 315 97 33 chr15 13389225 13389298 -90105676 + MLT1B LTR MaLR 6 82 -308 5 687 387 0 0 0 chr15 13389298 13389341 -90105633 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 5 687 389 309 36 90 chr15 13389341 13389508 -90105466 - RSINE1 SINE B4 -5 160 3 5 687 767 315 97 33 chr15 13389508 13389623 -90105351 + MLT1B LTR MaLR 83 215 -175 5 687 357 309 75 67 chr15 13389623 13389994 -90104980 + MLT1A LTR MaLR 1 374 0 5 687 767 315 97 33 chr15 13389994 13390164 -90104810 + MLT1B LTR MaLR 216 387 -3 5 687 402 100 0 0 chr15 13392635 13392695 -90102279 + (AGGGGG)n Simple_repeat Simple_repeat 1 60 0 5 687 321 355 29 41 chr15 13392714 13392958 -90102016 - Lx9 LINE L1 -207 7437 7197 5 687 1820 298 50 78 chr15 13393003 13394010 -90100964 + Lx8 LINE L1 6154 7153 -491 5 687 341 229 0 57 chr15 13394021 13394109 -90100865 - B4A SINE B4 -72 220 138 5 687 917 101 7 0 chr15 13394111 13394250 -90100724 + (TTCC)n Simple_repeat Simple_repeat 3 142 0 5 687 262 246 66 40 chr15 13394252 13394328 -90100646 - B4A SINE B4 -211 81 4 5 687 983 261 133 13 chr15 13394359 13394885 -90100089 - L1MA8 LINE L1 -234 6057 5469 5 687 3920 198 75 1 chr15 13394929 13395770 -90099204 - Lx9 LINE L1 -11 7633 6731 5 687 390 292 13 0 chr15 13395770 13395924 -90099050 - L1MA8 LINE L1 -871 5420 5265 5 687 499 279 160 93 chr15 13395935 13396114 -90098860 - MT2A LTR ERVL -35 682 336 5 687 2139 169 30 0 chr15 13396114 13396481 -90098493 - ORR1C1 LTR MaLR 0 378 1 5 687 499 279 160 93 chr15 13396481 13396555 -90098419 - MT2A LTR ERVL -255 462 159 5 687 460 289 118 55 chr15 13396555 13396793 -90098181 - MTEa LTR MaLR -118 261 9 5 687 765 275 151 5 chr15 13396798 13397175 -90097799 - L1MA8 LINE L1 -891 5252 4821 5 687 472 324 50 122 chr15 13397206 13397337 -90097637 - MLT1B LTR MaLR -2 388 274 5 687 1027 103 79 11 chr15 13397337 13397514 -90097460 - B2_Mm2 SINE B2 -5 190 2 5 687 472 324 50 122 chr15 13397514 13397800 -90097174 - MLT1B LTR MaLR -117 273 1 5 687 3619 151 28 5 chr15 13398201 13398815 -90096159 - Lx2B LINE L1 -4 6996 6369 5 687 298 125 62 0 chr15 13399857 13399937 -90095037 + (TA)n Simple_repeat Simple_repeat 1 85 0 5 687 508 302 115 45 chr15 13400703 13400991 -90093983 - Charlie13b DNA Charlie -79 433 126 5 687 336 102 0 0 chr15 13401243 13401292 -90093682 + (CAT)n Simple_repeat Simple_repeat 2 50 0 5 687 206 312 91 30 chr15 13401662 13401794 -90093180 - MIR SINE MIR -75 187 48 5 687 223 347 0 0 chr15 13402149 13402221 -90092753 + CT-rich Low_complexity Low_complexity 1 72 0 5 687 3264 67 2 14 chr15 13402403 13402736 -90092238 - L1_Mus2 LINE L1 -398 6168 5841 5 687 3200 31 37 3 chr15 13402736 13403119 -90091855 + MTA_Mm LTR MaLR 1 396 0 5 687 3264 67 2 14 chr15 13403119 13403224 -90091750 - L1_Mus2 LINE L1 -726 5840 5735 5 687 2824 88 0 0 chr15 13403224 13403601 -90091373 + L1_Mus2 LINE L1 6188 6564 -2 5 687 21 0 0 0 chr15 13403605 13403626 -90091348 + AT_rich Low_complexity Low_complexity 1 21 0 5 687 231 221 0 105 chr15 13405746 13405822 -90089152 + L3 LINE CR1 3825 3892 -597 5 687 27 62 0 0 chr15 13405897 13405945 -90089029 + AT_rich Low_complexity Low_complexity 1 48 0 5 687 514 325 60 68 chr15 13406291 13406644 -90088330 + MLT1A LTR MaLR 23 372 -2 5 687 488 335 54 38 chr15 13406762 13407001 -90087973 - L2c LINE L2 -15 3372 3130 5 687 1300 291 78 72 chr15 13407235 13407954 -90087020 - Lx8 LINE L1 -5 7468 6746 5 687 21 0 0 0 chr15 13408890 13408911 -90086063 + AT_rich Low_complexity Low_complexity 1 21 0 5 687 234 384 94 39 chr15 13409026 13409259 -90085715 + Lx8 LINE L1 7050 7295 -178 5 687 1551 209 131 3 chr15 13409275 13409634 -90085340 + MTD LTR MaLR 7 411 -8 5 687 283 217 0 0 chr15 13409830 13409890 -90085084 - L1_Rod LINE L1 -629 5218 5159 5 687 1025 193 196 41 chr15 13410418 13410597 -90084377 + Lx9 LINE L1 7226 7419 -225 5 687 459 0 0 0 chr15 13410597 13410648 -90084326 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 687 1025 193 196 41 chr15 13410648 13410758 -90084216 + Lx9 LINE L1 7420 7566 -78 5 687 1397 85 19 5 chr15 13410758 13410970 -90084004 - L1_Mus3 LINE L1 0 6638 6424 5 687 1025 193 196 41 chr15 13410970 13411042 -90083932 + Lx9 LINE L1 7567 7643 -1 5 687 307 230 0 83 chr15 13412725 13412829 -90082145 - ID4 SINE ID -55 97 2 5 687 1222 315 21 15 chr15 13413214 13413684 -90081290 - L1MA7 LINE L1 -356 5935 5463 5 687 313 336 94 23 chr15 13413783 13413911 -90081063 + B3A SINE B2 1 137 -61 5 687 432 0 0 0 chr15 13413934 13413982 -90080992 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 687 291 312 107 6 chr15 13414038 13414215 -90080759 - Lx8 LINE L1 -9 7464 7270 5 687 444 308 75 30 chr15 13414337 13414766 -90080208 - L1MA7 LINE L1 -743 5400 4885 5 687 980 96 0 7 chr15 13414766 13414905 -90080069 + (TC)n Simple_repeat Simple_repeat 1 139 0 5 687 1255 67 6 11 chr15 13414905 13415085 -90079889 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 5 687 980 96 0 7 chr15 13415085 13415092 -90079882 + (TC)n Simple_repeat Simple_repeat 2 8 0 5 687 250 244 92 58 chr15 13415102 13415189 -90079785 - L1MA7 LINE L1 -1207 4936 4847 5 687 1000 283 73 51 chr15 13415305 13415853 -90079121 - L1MA7 LINE L1 -1828 4312 3753 5 687 4062 156 37 6 chr15 13415860 13416584 -90078390 + RMER6A LTR ERVK 1 747 -9 5 687 511 242 70 37 chr15 13416606 13416821 -90078153 - L1MA7 LINE L1 -2438 3702 3481 5 687 393 269 0 19 chr15 13416819 13416925 -90078049 + Lx9 LINE L1 7161 7264 -380 5 687 278 379 72 6 chr15 13417310 13417520 -90077454 + LTR16B1 LTR ERVL 134 388 -92 5 687 198 0 0 0 chr15 13418333 13418355 -90076619 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 687 493 360 149 46 chr15 13418449 13418819 -90076155 + MLT1A1 LTR MaLR 1 408 0 5 687 327 230 58 0 chr15 13418921 13419008 -90075966 + Tigger9a DNA Tigger 156 247 -485 5 687 303 309 0 0 chr15 13419114 13419195 -90075779 - ID4_ SINE ID 0 83 3 5 687 252 0 0 0 chr15 13419214 13419242 -90075732 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 6 687 369 285 20 110 chr15 13419266 13419412 -90075562 - B1F SINE Alu -16 133 1 6 687 319 287 106 20 chr15 13419420 13419619 -90075355 + Tigger9a DNA Tigger 402 617 -115 5 687 492 18 0 0 chr15 13419701 13419758 -90075216 + (TC)n Simple_repeat Simple_repeat 2 58 0 6 687 306 115 0 0 chr15 13419760 13419812 -90075162 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 687 261 308 212 6 chr15 13419868 13420038 -90074936 + MIR SINE MIR 31 235 -27 6 687 189 265 205 0 chr15 13422813 13422896 -90072078 + L3 LINE CR1 961 1060 -3429 6 687 468 0 0 0 chr15 13423522 13423574 -90071400 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 687 903 233 34 144 chr15 13423705 13424116 -90070858 + ORR1D2 LTR MaLR 1 366 -4 6 687 480 125 0 0 chr15 13424139 13424235 -90070739 + (TA)n Simple_repeat Simple_repeat 1 96 0 6 687 193 200 20 100 chr15 13426036 13426086 -90068888 + L2b LINE L2 3330 3375 0 6 687 484 302 43 28 chr15 13426584 13426795 -90068179 - L1_Rod LINE L1 -20 5827 5614 6 687 518 287 62 13 chr15 13426811 13427037 -90067937 - L1_Rod LINE L1 -898 4949 4713 6 687 597 294 125 22 chr15 13427351 13427935 -90067039 + L1M2 LINE L1 2302 2945 -3198 6 687 1399 239 71 14 chr15 13427967 13428332 -90066642 + MTD LTR MaLR 25 410 -9 6 687 371 319 93 6 chr15 13428362 13428523 -90066451 + L1M2 LINE L1 2973 3147 -2996 6 687 683 296 99 39 chr15 13428537 13429051 -90065923 + L1_Mur3 LINE L1 3049 3593 -2287 6 687 847 270 39 71 chr15 13429051 13429362 -90065612 - MTE2b LTR MaLR -6 373 73 6 687 23 0 0 0 chr15 13429518 13429541 -90065433 + AT_rich Low_complexity Low_complexity 1 23 0 6 687 229 284 0 0 chr15 13429557 13429624 -90065350 - Lx7 LINE L1 -28 7668 7602 6 687 225 0 0 0 chr15 13429641 13429666 -90065308 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 6 687 321 283 167 0 chr15 13429699 13429837 -90065137 - Lx7 LINE L1 -329 7367 7207 6 687 3399 236 44 7 chr15 13429921 13430689 -90064285 - Lx6 LINE L1 -182 7278 6482 6 687 21 71 0 0 chr15 13430812 13430854 -90064120 + AT_rich Low_complexity Low_complexity 1 42 0 6 687 33 25 0 0 chr15 13431861 13431901 -90063073 + AT_rich Low_complexity Low_complexity 1 40 0 6 687 432 91 0 0 chr15 13432146 13432212 -90062762 + (CAT)n Simple_repeat Simple_repeat 3 68 0 6 687 381 43 0 0 chr15 13432600 13432647 -90062327 + (TTCC)n Simple_repeat Simple_repeat 3 49 0 6 687 258 295 31 10 chr15 13432647 13432743 -90062231 - BC1_Mm scRNA scRNA -53 99 2 6 687 2130 228 25 5 chr15 13433100 13433545 -90061429 + Lx5 LINE L1 6587 7040 -10 6 687 409 276 18 41 chr15 13433628 13433756 -90061218 + PB1D9 SINE Alu 2 129 -21 6 687 8860 102 27 10 chr15 13435080 13436497 -90058477 + L1_Mur1 LINE L1 2740 4180 -1706 6 687 3208 138 54 9 chr15 13436493 13437029 -90057945 + Lx3C LINE L1 6388 6947 -29 6 687 7486 40 12 1 chr15 13437112 13438030 -90056944 + L1Md_T LINE L1 5637 6564 -18 6 687 246 320 26 0 chr15 13438539 13438617 -90056357 + L2b LINE L2 3296 3375 0 6 687 558 0 85 0 chr15 13439721 13439803 -90055171 + (TTCTCC)n Simple_repeat Simple_repeat 3 91 0 6 687 1287 84 0 0 chr15 13439803 13439981 -90054993 + (TTC)n Simple_repeat Simple_repeat 3 180 0 6 687 6357 110 42 4 chr15 13439987 13440958 -90054016 - Lx3B LINE L1 -1 6972 5965 6 687 198 380 74 8 chr15 13441750 13441872 -90053102 + MIR SINE MIR 29 158 -104 6 687 569 282 125 77 chr15 13442504 13442857 -90052117 + ORR1D2 LTR MaLR 1 370 0 6 687 212 368 26 0 chr15 13443980 13444097 -90050877 - MIR3 SINE MIR -2 206 87 6 687 21 0 0 0 chr15 13445420 13445441 -90049533 + AT_rich Low_complexity Low_complexity 1 21 0 6 687 461 304 133 10 chr15 13446653 13446956 -90048018 + MLT2B2 LTR ERVL 1 340 -175 6 687 1785 184 24 78 chr15 13446997 13447380 -90047594 + ORR1C1 LTR MaLR 15 376 -2 6 687 3453 229 41 87 chr15 13447382 13448368 -90046606 + ORR1C1-int LTR MaLR 1 940 -430 6 687 487 272 13 178 chr15 13448372 13448512 -90046462 + B3A SINE B2 64 198 0 6 687 3962 63 4 0 chr15 13448512 13449016 -90045958 + L1_Mus1 LINE L1 6061 6566 -1 6 687 225 272 13 178 chr15 13449016 13449027 -90045947 + B2_Mm2 SINE B2 181 190 -5 6 687 464 203 137 42 chr15 13450036 13450226 -90044748 - L2a LINE L2 -14 3412 3205 6 687 300 342 57 44 chr15 13450440 13450599 -90044375 - MER103 DNA DNA 0 166 6 6 687 2953 100 9 2 chr15 13450788 13451219 -90043755 + L1_Mus4 LINE L1 6196 6629 -7 6 687 385 295 83 12 chr15 13451978 13452146 -90042828 - MLT1A LTR MaLR 0 374 195 6 687 309 268 60 60 chr15 13452136 13452156 -90042818 + CYRA11_Mm Unknown Y-chromosome 151 260 -357 6 687 699 201 7 0 chr15 13452156 13452295 -90042679 - URR1B DNA MER1_type 0 225 86 6 687 315 296 65 70 chr15 13452345 13452530 -90042444 - MLT1A LTR MaLR -172 202 19 6 687 257 254 56 56 chr15 13452895 13453037 -90041937 + Charlie7 DNA MER1_type 2465 2606 -6 6 687 439 277 14 35 chr15 13453144 13453286 -90041688 + MLT1A1 LTR MaLR 270 408 0 6 687 21 0 0 0 chr15 13453565 13453586 -90041388 + AT_rich Low_complexity Low_complexity 1 21 0 6 687 485 296 11 0 chr15 13454160 13454336 -90040638 + (CA)n Simple_repeat Simple_repeat 1 178 0 6 687 226 250 0 38 chr15 13454356 13454539 -90040435 + (CATA)n Simple_repeat Simple_repeat 1 176 0 6 687 308 281 0 6 chr15 13454512 13454691 -90040283 + (CA)n Simple_repeat Simple_repeat 2 179 0 6 687 902 316 73 50 chr15 13455519 13455999 -90038975 - LTR40a LTR ERVL -22 497 7 6 687 406 314 40 28 chr15 13456676 13456853 -90038121 + Lx7 LINE L1 7161 7339 -357 6 687 318 50 0 0 chr15 13456873 13456913 -90038061 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 687 952 309 96 6 chr15 13458048 13458569 -90036405 + L1MB4 LINE L1 5569 6136 -44 6 687 876 318 43 20 chr15 13459147 13459494 -90035480 - MLT1A0 LTR MaLR 0 365 11 6 687 641 312 68 69 chr15 13459505 13459964 -90035010 + MLT2D LTR ERVL 36 456 -8 6 687 1692 159 29 71 chr15 13460391 13460742 -90034232 - ORR1C1 LTR MaLR 0 378 43 6 687 5013 128 14 5 chr15 13461240 13462578 -90032396 - L1VL4 LINE L1 -2002 1557 207 6 687 1764 225 95 87 chr15 13462618 13462898 -90032076 + RMER19C LTR ERVK 8 312 -299 6 687 909 133 7 0 chr15 13462898 13463033 -90031941 + B1_Mus1 SINE Alu 3 138 -10 6 687 360 0 0 0 chr15 13463033 13463073 -90031901 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 6 687 1764 225 95 87 chr15 13463073 13463390 -90031584 + RMER19C LTR ERVK 313 610 -1 6 687 302 86 0 33 chr15 13463429 13463489 -90031485 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 6 687 229 113 15 46 chr15 13465728 13465793 -90029181 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 6 687 231 36 0 0 chr15 13466240 13466268 -90028706 + (T)n Simple_repeat Simple_repeat 1 28 0 6 687 2534 319 67 17 chr15 13467387 13467538 -90027436 + Lx8 LINE L1 6373 6525 -948 6 687 387 0 0 0 chr15 13467538 13467581 -90027393 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 687 2534 319 67 17 chr15 13467581 13468446 -90026528 + Lx8 LINE L1 6526 7440 -33 6 687 379 300 103 27 chr15 13468697 13468920 -90026054 + L1MA6 LINE L1 5865 6104 -196 6 687 1977 187 58 18 chr15 13469023 13469421 -90025553 + MTC LTR MaLR 1 414 -7 6 687 446 283 109 8 chr15 13469451 13469579 -90025395 + RSINE1 SINE B4 2 142 -23 6 687 424 271 136 50 chr15 13469742 13469963 -90025011 - L1ME2 LINE L1 -200 5964 5725 6 687 576 29 0 0 chr15 13471398 13471468 -90023506 + (TC)n Simple_repeat Simple_repeat 2 71 0 6 687 1218 14 0 0 chr15 13472120 13472260 -90022714 + (TTC)n Simple_repeat Simple_repeat 1 140 0 6 687 247 314 60 40 chr15 13472383 13472582 -90022392 - L1ME3B LINE L1 -302 5938 5736 6 687 306 320 111 46 chr15 13472721 13472937 -90022037 + MIR SINE MIR 32 261 -1 6 687 344 133 100 0 chr15 13473068 13473128 -90021846 + HAL1-3A_ME LINE L1 1953 2018 -840 6 687 21 0 0 0 chr15 13473132 13473153 -90021821 + GC_rich Low_complexity Low_complexity 1 21 0 6 687 348 227 42 8 chr15 13473223 13473343 -90021631 + RMER17A LTR ERVK 333 456 -295 6 687 247 236 0 0 chr15 13473466 13473538 -90021436 - RMER17C LTR ERVK -155 255 184 6 687 381 22 0 0 chr15 13473550 13473596 -90021378 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 687 571 322 60 75 chr15 13473599 13473864 -90021110 - B4A SINE B4 -16 276 16 6 687 268 314 33 44 chr15 13474405 13474495 -90020479 - RSINE1 SINE B4 -1 164 76 6 687 286 321 20 54 chr15 13474571 13474719 -90020255 - Lx9 LINE L1 -1692 5952 5810 6 687 22 56 0 0 chr15 13474870 13474906 -90020068 + AT_rich Low_complexity Low_complexity 1 36 0 6 687 183 153 16 48 chr15 13475220 13475282 -90019692 + CT-rich Low_complexity Low_complexity 3 62 0 6 687 423 297 50 30 chr15 13475767 13475965 -90019009 - L1M5 LINE L1 -406 5767 5566 6 687 328 308 38 21 chr15 13476366 13476552 -90018422 - L1M5 LINE L1 -979 5167 4979 6 687 713 51 0 0 chr15 13476837 13476935 -90018039 - L1_Mus2 LINE L1 -1 6565 6468 6 687 263 303 0 22 chr15 13477001 13477092 -90017882 - Charlie4z DNA MER1_type -37 130 42 6 687 22 0 0 0 chr15 13477438 13477460 -90017514 + AT_rich Low_complexity Low_complexity 1 22 0 6 687 183 342 50 25 chr15 13477764 13477884 -90017090 - L2 LINE L2 -749 2670 2548 6 687 22 0 0 0 chr15 13478361 13478383 -90016591 + AT_rich Low_complexity Low_complexity 1 22 0 6 687 355 182 112 11 chr15 13478789 13478806 -90016168 - RMER1A Other Other -11 1019 994 6 687 279 0 0 0 chr15 13478806 13478837 -90016137 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 687 355 182 112 11 chr15 13478837 13478908 -90016066 - RMER1A Other Other -37 993 922 6 687 396 242 30 59 chr15 13479086 13479187 -90015787 + RSINE1 SINE B4 68 165 0 6 687 369 0 0 0 chr15 13480959 13481000 -90013974 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 687 8668 97 16 4 chr15 13481842 13483132 -90011842 + L1_Mm LINE L1 3383 4688 -1195 6 687 792 315 89 67 chr15 13484552 13484943 -90010031 + MLT2B3 LTR ERVL 155 554 0 6 687 235 326 43 33 chr15 13484946 13485038 -90009936 + MER117 DNA MER1_type 66 158 -39 6 687 21 57 0 0 chr15 13485560 13485595 -90009379 + AT_rich Low_complexity Low_complexity 1 35 0 7 687 26 30 0 0 chr15 13485820 13485853 -90009121 + AT_rich Low_complexity Low_complexity 1 33 0 7 687 291 348 99 88 chr15 13485939 13486129 -90008845 + B4 SINE B4 2 193 -99 7 687 720 35 0 0 chr15 13486129 13486216 -90008758 + (CAAAA)n Simple_repeat Simple_repeat 3 89 0 7 687 291 348 99 88 chr15 13486216 13486309 -90008665 + B4 SINE B4 194 288 -4 7 687 498 108 0 0 chr15 13486353 13486427 -90008547 + (CA)n Simple_repeat Simple_repeat 1 74 0 7 687 360 0 0 0 chr15 13486427 13486466 -90008508 + (GA)n Simple_repeat Simple_repeat 2 41 0 7 687 2148 100 13 16 chr15 13487642 13487956 -90007018 - L1_Mus3 LINE L1 -507 6131 5819 7 687 3228 109 23 40 chr15 13487957 13488213 -90006761 + L1_Mus3 LINE L1 6115 6375 -263 7 687 265 0 49 24 chr15 13488213 13488254 -90006720 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 7 687 3228 109 23 40 chr15 13488254 13488523 -90006451 + L1_Mus3 LINE L1 6376 6631 -7 7 687 24 0 0 0 chr15 13489422 13489446 -90005528 + AT_rich Low_complexity Low_complexity 1 24 0 7 687 356 0 0 22 chr15 13491595 13491640 -90003334 + (TTA)n Simple_repeat Simple_repeat 2 45 0 7 687 22 0 0 0 chr15 13493337 13493359 -90001615 + AT_rich Low_complexity Low_complexity 1 22 0 7 687 181 338 14 14 chr15 13493875 13493947 -90001027 + MIRc SINE MIR 159 230 -38 7 687 229 100 40 0 chr15 13494576 13494626 -90000348 + (TA)n Simple_repeat Simple_repeat 1 52 0 7 687 2555 191 91 15 chr15 13495488 13496073 -89998901 + Lx9 LINE L1 6874 7502 -142 7 687 318 204 20 10 chr15 13496174 13496273 -89998701 + CT-rich Low_complexity Low_complexity 1 100 0 7 687 1118 89 0 0 chr15 13497283 13497429 -89997545 + B1_Mus1 SINE Alu 1 146 -2 7 687 228 67 0 0 chr15 13497429 13497459 -89997515 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 7 687 40 59 0 0 chr15 13497465 13497533 -89997441 + AT_rich Low_complexity Low_complexity 1 68 0 7 687 206 345 11 0 chr15 13498353 13498440 -89996534 + MIR SINE MIR 112 199 -63 7 687 970 160 6 11 chr15 13498742 13498919 -89996055 - B2_Mm2 SINE B2 -19 176 1 7 687 219 246 31 147 chr15 13500130 13500259 -89994715 - L3 LINE CR1 -108 4381 4268 1 85 1828 171 107 71 chr15 13500328 13500795 -89994179 + RMER6C LTR ERVK 1 484 -206 2 688 1331 62 17 0 chr15 13500795 13500972 -89994002 + L1_Mus4 LINE L1 6257 6436 -200 3 688 1297 181 19 93 chr15 13500989 13501311 -89993663 + RMER6C LTR ERVK 393 690 0 4 688 4571 132 98 1 chr15 13501656 13502867 -89992107 + Lx4A LINE L1 4977 6296 -762 5 688 339 85 0 0 chr15 13503068 13503115 -89991859 + (AAATG)n Simple_repeat Simple_repeat 4 50 0 6 688 268 296 222 0 chr15 13503136 13503244 -89991730 - Arthur1 DNA Tip100 -3815 132 1 7 688 189 258 156 31 chr15 13503420 13503484 -89991490 + MIRm SINE MIR 21 92 -184 8 688 22 0 0 0 chr15 13503976 13503998 -89990976 + AT_rich Low_complexity Low_complexity 1 22 0 9 688 321 419 65 0 chr15 13504129 13504313 -89990661 + MER58A DNA MER1_type 11 206 -18 1 688 284 303 0 0 chr15 13504895 13504961 -89990013 - ID4 SINE ID -2 81 16 1 688 204 296 124 36 chr15 13504970 13505107 -89989867 + L2a LINE L2 3249 3397 -29 1 688 21 57 0 0 chr15 13505190 13505225 -89989749 + AT_rich Low_complexity Low_complexity 1 35 0 1 688 413 220 132 13 chr15 13505259 13505411 -89989563 - Lx8 LINE L1 0 7473 7304 1 688 4435 48 7 0 chr15 13505463 13506007 -89988967 - L1Md_F2 LINE L1 0 6582 6035 1 688 522 46 0 0 chr15 13506645 13506710 -89988264 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 1 688 432 0 0 0 chr15 13506710 13506758 -89988216 + (TC)n Simple_repeat Simple_repeat 2 49 0 1 688 2746 69 8 5 chr15 13506934 13507311 -89987663 - L1_Mus1 LINE L1 0 6567 6190 1 688 419 185 0 11 chr15 13508599 13508692 -89986282 + CT-rich Low_complexity Low_complexity 2 93 0 1 688 546 113 0 0 chr15 13509028 13509125 -89985849 + (TC)n Simple_repeat Simple_repeat 2 98 0 2 688 291 28 0 0 chr15 13509126 13509162 -89985812 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 688 781 311 64 52 chr15 13509166 13509492 -89985482 - MLT1A0 LTR MaLR -33 332 3 2 688 1967 283 53 27 chr15 13511078 13511924 -89983050 - L1_Mur3 LINE L1 -1010 4870 4003 2 688 797 250 70 38 chr15 13511923 13512210 -89982764 + Lx8 LINE L1 7176 7471 -2 2 688 551 74 0 12 chr15 13512961 13513043 -89981931 + (CAG)n Simple_repeat Simple_repeat 3 83 0 2 688 27 73 0 0 chr15 13513995 13514050 -89980924 + AT_rich Low_complexity Low_complexity 1 55 0 2 688 376 250 149 31 chr15 13514576 13514737 -89980237 - MIRc SINE MIR -31 237 58 2 688 352 285 121 21 chr15 13514857 13515047 -89979927 + B3 SINE B2 3 211 -5 2 688 598 341 93 14 chr15 13515734 13516100 -89978874 + MER90a LTR ERV1 56 450 -164 2 688 436 320 16 8 chr15 13516316 13516445 -89978529 + B1F SINE Alu 11 140 -9 3 688 2484 79 45 0 chr15 13517547 13517901 -89977073 - Lx3_Mus LINE L1 -212 6797 6428 3 688 1327 138 36 4 chr15 13517899 13518124 -89976850 + Lx3_Mus LINE L1 6755 6986 -23 3 688 207 69 0 0 chr15 13518124 13518153 -89976821 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 3 688 486 108 0 0 chr15 13518191 13518265 -89976709 + (GAAAA)n Simple_repeat Simple_repeat 1 74 0 3 688 572 255 111 5 chr15 13518589 13518616 -89976358 - B3 SINE B2 -6 210 183 3 688 453 66 0 0 chr15 13518616 13518677 -89976297 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 688 572 255 111 5 chr15 13518677 13518838 -89976136 - B3 SINE B2 -34 182 3 3 688 353 315 0 0 chr15 13518890 13519001 -89975973 - B3A SINE B2 -78 120 10 3 688 867 330 131 11 chr15 13519708 13520152 -89974822 - LTR33 LTR ERVL 0 515 19 3 688 202 370 0 0 chr15 13520195 13520276 -89974698 - L2a LINE L2 -4 3422 3342 3 688 777 135 0 0 chr15 13520314 13520440 -89974534 + (TTTC)n Simple_repeat Simple_repeat 3 128 0 3 688 504 158 17 9 chr15 13521206 13521321 -89973653 + GA-rich Low_complexity Low_complexity 3 118 0 4 688 908 28 49 0 chr15 13522090 13522234 -89972740 + (GA)n Simple_repeat Simple_repeat 2 152 0 4 688 761 114 0 8 chr15 13524456 13524580 -89970394 + (CA)n Simple_repeat Simple_repeat 2 124 0 4 688 531 0 0 0 chr15 13524580 13524639 -89970335 + (TA)n Simple_repeat Simple_repeat 2 60 0 4 688 1006 88 66 0 chr15 13525340 13525477 -89969497 + B1_Mus2 SINE Alu 2 147 0 4 688 333 93 0 0 chr15 13525480 13525534 -89969440 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 4 688 1388 215 67 22 chr15 13525788 13526119 -89968855 + ORR1D1 LTR MaLR 1 347 -27 4 688 1137 72 0 0 chr15 13526119 13526271 -89968703 + (TTTC)n Simple_repeat Simple_repeat 1 152 0 4 688 1388 215 67 22 chr15 13526271 13526296 -89968678 + ORR1D1 LTR MaLR 348 372 -2 4 688 957 108 6 18 chr15 13526820 13526989 -89967985 + (TCTA)n Simple_repeat Simple_repeat 2 168 0 4 688 279 0 0 0 chr15 13526990 13527021 -89967953 + (CCTG)n Simple_repeat Simple_repeat 2 32 0 4 688 862 76 14 27 chr15 13527117 13527265 -89967709 - Lx LINE L1 0 6654 6509 5 688 1799 60 0 4 chr15 13528212 13528447 -89966527 + L1Md_F2 LINE L1 6349 6582 0 5 688 2626 249 109 35 chr15 13528491 13529338 -89965636 + RMER1C Other Other 433 1341 -1 5 688 366 23 0 0 chr15 13530339 13530382 -89964592 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 688 393 22 0 0 chr15 13530382 13530427 -89964547 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 688 203 311 36 36 chr15 13531735 13531845 -89963129 + L2a LINE L2 3315 3424 -2 5 688 249 108 0 0 chr15 13531928 13531965 -89963009 + (TTTTC)n Simple_repeat Simple_repeat 2 38 0 5 688 206 245 18 36 chr15 13532116 13532171 -89962803 + MIRb SINE MIR 136 189 -79 5 688 3090 164 0 19 chr15 13532243 13532772 -89962202 + Lx LINE L1 6119 6637 -17 5 688 328 320 107 13 chr15 13532814 13532963 -89962011 + B3 SINE B2 2 164 -52 5 688 259 192 0 27 chr15 13533040 13533115 -89961859 + CT-rich Low_complexity Low_complexity 2 74 0 6 688 1145 268 201 7 chr15 13533965 13534378 -89960596 - Lx6 LINE L1 -9 7451 6959 6 688 1503 251 21 49 chr15 13534389 13534951 -89960023 - Lx6 LINE L1 -575 6885 6122 6 688 982 205 41 49 chr15 13534934 13535085 -89959889 - L1_Mur2 LINE L1 -489 5388 5235 6 688 2804 55 0 0 chr15 13535085 13535431 -89959543 - ORR1A1 LTR MaLR 0 346 1 6 688 982 205 41 49 chr15 13535431 13535546 -89959428 - L1_Mur2 LINE L1 -643 5234 5124 6 688 1187 297 49 20 chr15 13535983 13536333 -89958641 - MTE2b LTR MaLR 0 379 20 6 688 231 226 19 0 chr15 13536440 13536493 -89958481 + CT-rich Low_complexity Low_complexity 1 54 0 6 688 352 302 147 64 chr15 13538933 13539498 -89955476 - L1MA7 LINE L1 -7 6284 5673 6 688 1318 240 46 0 chr15 13539568 13539851 -89955123 + MTC LTR MaLR 64 359 -62 6 688 1459 226 175 90 chr15 13539850 13540405 -89954569 - RMER20B LTR ERVK -25 602 1 6 688 335 238 18 79 chr15 13540405 13540480 -89954494 + MTC LTR MaLR 352 419 0 6 688 240 192 41 0 chr15 13540613 13540686 -89954288 + (CAAAC)n Simple_repeat Simple_repeat 3 78 0 6 688 342 302 128 39 chr15 13540714 13540758 -89954216 + L1M2 LINE L1 5048 5096 -1047 7 688 307 65 0 0 chr15 13540758 13540804 -89954170 + L1_Mus2 LINE L1 6521 6566 0 7 688 189 0 0 0 chr15 13540814 13540835 -89954139 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 7 688 342 302 128 39 chr15 13540835 13541013 -89953961 + L1M2 LINE L1 5109 5300 -843 7 688 241 241 87 0 chr15 13541096 13541202 -89953772 + L1M2 LINE L1 5347 5460 -843 7 688 1765 187 6 9 chr15 13542450 13542769 -89952205 - Lx4A LINE L1 -2 7056 6739 7 688 1566 261 26 16 chr15 13543098 13543480 -89951494 - MTD LTR MaLR 0 419 34 7 688 466 371 107 48 chr15 13543900 13544254 -89950720 + MER70B LTR ERVL 114 488 -90 7 688 249 153 121 66 chr15 13544393 13544484 -89950490 - MLT2C2 LTR ERVL 0 562 467 7 688 723 244 135 0 chr15 13546483 13546713 -89948261 - Lx9 LINE L1 -117 7527 7267 7 688 349 143 43 11 chr15 13546716 13546808 -89948166 + Lx9 LINE L1 7549 7643 -1 7 688 195 42 0 0 chr15 13547162 13547186 -89947788 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 688 2302 317 77 57 chr15 13547313 13548578 -89946396 + Lx8 LINE L1 6182 7471 -2 8 688 271 301 71 0 chr15 13548586 13548699 -89946275 + MIR SINE MIR 129 249 -13 8 688 324 0 0 0 chr15 13549090 13549126 -89945848 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 8 688 345 292 91 41 chr15 13549135 13549326 -89945648 + MLT1A0 LTR MaLR 162 374 0 8 688 256 236 14 14 chr15 13550466 13550539 -89944435 + (CATATA)n Simple_repeat Simple_repeat 4 76 0 8 688 2259 86 0 6 chr15 13551345 13551661 -89943313 + L1_Mus1 LINE L1 6254 6567 0 8 688 1093 303 45 46 chr15 13551935 13552540 -89942434 - L1MA6 LINE L1 -103 6197 5594 8 688 234 226 129 0 chr15 13552529 13552622 -89942352 - L1P5 LINE L1 -669 5487 5383 8 688 237 139 0 0 chr15 13552675 13552718 -89942256 + (TTA)n Simple_repeat Simple_repeat 1 43 0 8 688 289 269 17 9 chr15 13552719 13552835 -89942139 - L1MA6 LINE L1 -847 5296 5180 8 688 921 296 44 14 chr15 13552872 13553239 -89941735 + L1M2 LINE L1 4584 4961 -1182 8 688 21 0 0 0 chr15 13555208 13555229 -89939745 + AT_rich Low_complexity Low_complexity 1 21 0 9 688 1060 295 42 15 chr15 13555688 13556090 -89938884 + Lx8 LINE L1 6100 6512 -961 9 688 3746 60 0 36 chr15 13556097 13556597 -89938377 + L1Md_F2 LINE L1 6101 6582 0 9 688 198 0 0 0 chr15 13556609 13556631 -89938343 + (CA)n Simple_repeat Simple_repeat 1 22 0 9 688 1167 219 57 148 chr15 13556795 13557213 -89937761 + ORR1C2 LTR MaLR 5 384 0 9 688 24 0 0 0 chr15 13557431 13557455 -89937519 + AT_rich Low_complexity Low_complexity 1 24 0 9 688 557 264 37 129 chr15 13557647 13557864 -89937110 - Lx8 LINE L1 -358 7115 6919 9 688 650 309 49 0 chr15 13557884 13558127 -89936847 - Lx8 LINE L1 -652 6821 6567 9 688 219 150 0 0 chr15 13558462 13558502 -89936472 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 9 688 320 248 26 34 chr15 13558865 13558982 -89935992 + L1M5 LINE L1 3895 4010 -2136 9 688 240 35 0 0 chr15 13559304 13559333 -89935641 + (CA)n Simple_repeat Simple_repeat 2 30 0 9 688 308 281 20 27 chr15 13559658 13559808 -89935166 + L1M5 LINE L1 4891 5039 -1107 9 688 2124 110 28 3 chr15 13559812 13560130 -89934844 - L1_Mus4 LINE L1 -20 6616 6291 1 688 349 332 55 30 chr15 13560118 13560481 -89934493 + L1M5 LINE L1 5027 5398 -748 9 688 231 305 37 37 chr15 13560950 13561059 -89933915 + L1M5 LINE L1 5563 5671 -502 9 688 753 129 0 17 chr15 13561689 13561807 -89933167 - B1_Mur4 SINE Alu 0 150 35 1 688 227 191 14 87 chr15 13561747 13561816 -89933158 - 4.5SRNA scRNA scRNA -8 86 23 1 688 2914 112 45 19 chr15 13561975 13562441 -89932533 + L1_Mus3 LINE L1 6161 6638 0 1 688 1002 192 23 18 chr15 13562598 13562816 -89932158 + Lx2B LINE L1 6781 6999 -1 1 688 691 247 7 0 chr15 13562839 13562985 -89931989 + B1_Mus2 SINE Alu 1 147 0 1 688 230 320 0 91 chr15 13563419 13563529 -89931445 - PB1D10 SINE Alu -7 110 11 1 688 22 0 0 0 chr15 13564709 13564731 -89930243 + AT_rich Low_complexity Low_complexity 1 22 0 1 688 23 0 0 0 chr15 13564877 13564900 -89930074 + AT_rich Low_complexity Low_complexity 1 23 0 1 688 369 0 0 0 chr15 13565600 13565641 -89929333 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 688 495 0 0 0 chr15 13565641 13565695 -89929279 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 688 1715 209 67 34 chr15 13566347 13566734 -89928240 + MTD LTR MaLR 20 419 0 1 688 26 50 0 0 chr15 13566835 13566875 -89928099 + AT_rich Low_complexity Low_complexity 1 40 0 1 688 266 164 18 0 chr15 13566875 13566930 -89928044 + GA-rich Low_complexity Low_complexity 3 58 0 1 688 1001 139 0 6 chr15 13566931 13567105 -89927869 + (GGGAGA)n Simple_repeat Simple_repeat 4 176 0 1 688 611 103 0 10 chr15 13567108 13567206 -89927768 + (GAAA)n Simple_repeat Simple_repeat 4 100 0 1 688 519 324 14 0 chr15 13567225 13567364 -89927610 - B1_Mur1 SINE Alu -8 141 1 1 688 704 214 38 47 chr15 13568074 13568285 -89926689 + Lx9 LINE L1 7429 7637 -7 1 688 194 362 77 63 chr15 13568513 13568734 -89926240 + MIRc SINE MIR 41 264 -4 1 688 498 252 192 51 chr15 13569360 13569594 -89925380 + Lx8 LINE L1 7198 7464 -9 1 688 237 299 0 0 chr15 13570379 13570456 -89924518 + ORR1E LTR MaLR 25 101 -258 1 688 1358 150 131 20 chr15 13570561 13570813 -89924161 - Lx4A LINE L1 -518 6540 6261 1 688 951 237 34 25 chr15 13570876 13570978 -89923996 - MTE2b LTR MaLR 0 379 277 1 688 549 0 0 0 chr15 13570978 13571039 -89923935 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 1 688 951 275 284 16 chr15 13571039 13571249 -89923725 - MTE2b LTR MaLR -103 276 10 1 688 24 53 0 0 chr15 13572294 13572332 -89922642 + AT_rich Low_complexity Low_complexity 1 38 0 1 688 360 356 102 28 chr15 13573054 13573308 -89921666 + LTR16B2 LTR ERVL 153 425 -37 1 688 468 0 0 0 chr15 13574245 13574297 -89920677 + (GA)n Simple_repeat Simple_repeat 2 53 0 1 688 2660 81 12 3 chr15 13574479 13574893 -89920081 - L1VL1 LINE L1 -4288 1595 1188 1 688 1629 31 0 0 chr15 13574893 13575084 -89919890 - B2_Mm1a SINE B2 -2 191 1 1 688 1240 102 0 55 chr15 13575084 13575133 -89919841 - L1VL1 LINE L1 -5451 1187 1139 1 688 3745 66 0 8 chr15 13575132 13575651 -89919323 + L1Md_F2 LINE L1 1819 2333 -3550 1 688 4966 71 3 0 chr15 13575649 13576299 -89918675 + L1Md_F2 LINE L1 4936 5587 -296 1 688 7397 66 8 5 chr15 13576301 13577276 -89917698 + L1Md_F2 LINE L1 5590 6567 -15 1 688 369 0 0 0 chr15 13577858 13577899 -89917075 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 688 253 357 0 67 chr15 13578581 13578598 -89916376 - PB1D10 SINE Alu -5 112 15 1 688 364 318 0 0 chr15 13578598 13578686 -89916288 - ID_B1 SINE B4 -41 183 96 1 688 27 0 0 0 chr15 13578762 13578789 -89916185 + AT_rich Low_complexity Low_complexity 1 27 0 1 688 374 0 22 0 chr15 13579414 13579460 -89915514 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 1 688 597 326 5 26 chr15 13579546 13579741 -89915233 + B3A SINE B2 2 192 -6 1 688 7125 135 26 2 chr15 13580100 13581451 -89913523 + Lx3C LINE L1 4658 6042 -934 1 688 3068 192 57 40 chr15 13581441 13582092 -89912882 + Lx3C LINE L1 6315 6976 0 1 688 1414 266 2 115 chr15 13585521 13585569 -89909405 - RMER19C LTR ERVK 0 611 579 1 688 4369 86 30 0 chr15 13585569 13586172 -89908802 - L1_Mus3 LINE L1 -12 6626 6006 1 688 1414 278 38 119 chr15 13586172 13586919 -89908055 - RMER19C LTR ERVK -33 869 8 1 688 324 48 0 0 chr15 13587171 13587213 -89907761 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 688 3552 70 6 52 chr15 13587550 13588060 -89906914 + L1Md_F2 LINE L1 6099 6582 0 1 688 304 289 92 0 chr15 13589489 13589631 -89905343 - MER33 DNA MER1_type -150 174 20 1 688 32 26 0 0 chr15 13589790 13589829 -89905145 + AT_rich Low_complexity Low_complexity 1 39 0 1 688 729 101 193 0 chr15 13590447 13590566 -89904408 + B1_Mus1 SINE Alu 2 143 -5 1 688 295 89 36 0 chr15 13591072 13591128 -89903846 + (TTTG)n Simple_repeat Simple_repeat 3 60 0 1 688 519 60 0 0 chr15 13591720 13591787 -89903187 + (TA)n Simple_repeat Simple_repeat 1 67 0 1 688 697 325 93 12 chr15 13591871 13592300 -89902674 + MLT1C LTR MaLR 1 464 -3 1 688 236 324 23 12 chr15 13593212 13593297 -89901677 + MIR SINE MIR 2 86 -182 1 688 22 0 0 0 chr15 13593623 13593645 -89901329 + AT_rich Low_complexity Low_complexity 1 22 0 1 688 210 150 0 0 chr15 13593861 13593901 -89901073 + (CATA)n Simple_repeat Simple_repeat 2 41 0 1 688 294 29 0 0 chr15 13593901 13593936 -89901038 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 688 27 29 0 0 chr15 13594265 13594299 -89900675 + AT_rich Low_complexity Low_complexity 1 34 0 1 688 8867 90 15 16 chr15 13594299 13595592 -89899382 - Lx3_Mus LINE L1 0 7009 5718 1 688 6075 84 37 3 chr15 13595594 13596029 -89898945 + L1_Mur1 LINE L1 4824 5277 -609 1 688 486 0 0 0 chr15 13596029 13596083 -89898891 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 688 6075 84 37 3 chr15 13596083 13596511 -89898463 + L1_Mur1 LINE L1 5278 5715 -171 1 688 399 277 14 110 chr15 13597266 13597412 -89897562 + B4 SINE B4 9 140 -152 1 688 585 242 0 52 chr15 13598904 13599039 -89895935 + ID_B1 SINE B4 94 221 -3 1 688 27145 114 8 47 chr15 13599180 13600725 -89894249 - L1Md_F2 LINE L1 -19 6563 5026 1 688 4298 104 53 22 chr15 13600725 13601439 -89893535 - RMER17A LTR ERVK -15 736 1 1 688 27145 114 8 47 chr15 13601439 13605911 -89889063 - L1Md_F2 LINE L1 -19 5025 570 1 688 386 333 62 0 chr15 13606383 13606512 -89888462 - B3 SINE B2 -14 202 66 1 688 244 288 17 0 chr15 13607672 13607731 -89887243 + Cheshire DNA MER1_type 188 247 -2173 1 688 1669 10 0 10 chr15 13608553 13608753 -89886221 - L1Md_F3 LINE L1 -25 6559 6362 1 688 373 268 39 0 chr15 13608756 13608883 -89886091 - Lx9 LINE L1 -6 7638 7507 1 688 243 0 0 0 chr15 13608884 13608911 -89886063 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 688 635 292 34 29 chr15 13608949 13609157 -89885817 + Lx9 LINE L1 7213 7421 -223 1 688 284 297 0 0 chr15 13609292 13609356 -89885618 - MER2B DNA MER2_type -272 64 1 1 688 440 62 16 0 chr15 13609701 13609765 -89885209 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 688 333 0 0 0 chr15 13609765 13609801 -89885173 + (GA)n Simple_repeat Simple_repeat 2 38 0 1 688 291 294 130 56 chr15 13611433 13611649 -89883325 + MLT2B1 LTR ERVL 274 519 -48 1 688 637 43 11 21 chr15 13611652 13611746 -89883228 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 1 688 259 359 9 68 chr15 13612389 13612610 -89882364 + L1MCa LINE L1 521 728 -5317 1 688 305 379 113 15 chr15 13612669 13612996 -89881978 + Lx8 LINE L1 6865 7223 -250 1 688 306 258 131 46 chr15 13614210 13614290 -89880684 + L1MCa LINE L1 2386 2475 -4276 1 688 708 231 7 0 chr15 13614290 13614437 -89880537 + B1_Mus1 SINE Alu 1 148 0 1 688 306 258 131 46 chr15 13614437 13614486 -89880488 + L1MCa LINE L1 2476 2525 -4226 1 688 365 306 126 51 chr15 13614593 13615006 -89879968 + L1MCa LINE L1 2572 3015 -3549 1 688 25 0 0 0 chr15 13615209 13615234 -89879740 + AT_rich Low_complexity Low_complexity 1 25 0 1 688 21 57 0 0 chr15 13615275 13615310 -89879664 + AT_rich Low_complexity Low_complexity 1 35 0 1 688 311 274 51 0 chr15 13615429 13615546 -89879428 + L1MCa LINE L1 3377 3499 -3065 1 688 2373 128 31 13 chr15 13615896 13616283 -89878691 + Lx LINE L1 6259 6652 -2 1 688 25 31 0 0 chr15 13616284 13616316 -89878658 + AT_rich Low_complexity Low_complexity 1 32 0 1 688 426 281 92 105 chr15 13616323 13616769 -89878205 + L1MCa LINE L1 3789 4228 -2336 1 688 301 283 33 0 chr15 13616972 13617064 -89877910 - L1MC3 LINE L1 -622 7163 7069 1 688 26266 27 0 0 chr15 13617463 13620588 -89874386 + L1Md_T LINE L1 2462 5586 -297 1 688 8932 6 0 2 chr15 13620588 13621614 -89873360 + L1Md_T LINE L1 5587 6582 0 1 688 272 354 0 0 chr15 13621888 13621953 -89873021 + ID4_ SINE ID 14 78 -5 1 688 219 236 0 18 chr15 13622064 13622120 -89872854 + (TATG)n Simple_repeat Simple_repeat 3 57 0 1 688 339 296 13 78 chr15 13622696 13622713 -89872261 + ID_B1 SINE B4 73 216 -8 1 688 557 248 15 29 chr15 13622713 13622850 -89872124 + B1_Mur2 SINE Alu 7 141 -8 1 688 296 316 51 34 chr15 13622879 13623056 -89871918 + L1M2 LINE L1 5596 5775 -516 1 688 22 0 0 0 chr15 13623087 13623109 -89871865 + AT_rich Low_complexity Low_complexity 1 22 0 1 688 392 68 0 33 chr15 13623740 13623801 -89871173 + (TTTTC)n Simple_repeat Simple_repeat 1 59 0 1 688 201 179 26 0 chr15 13623942 13623981 -89870993 + CT-rich Low_complexity Low_complexity 1 40 0 1 688 1864 337 43 8 chr15 13624186 13625032 -89869942 - Lx8 LINE L1 -216 7257 6383 1 688 806 259 90 7 chr15 13625033 13625222 -89869752 + Lx8 LINE L1 5245 5447 -433 1 688 306 73 0 0 chr15 13625222 13625263 -89869711 + (TGG)n Simple_repeat Simple_repeat 1 41 0 1 688 806 261 78 7 chr15 13625263 13625380 -89869594 + Lx8 LINE L1 5448 5609 -2176 1 688 259 308 22 0 chr15 13625363 13625454 -89869520 + Lx8 LINE L1 6257 6349 -1124 1 688 1130 117 0 6 chr15 13625815 13625995 -89868979 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1 688 192 77 0 0 chr15 13625996 13626022 -89868952 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1 688 2012 151 12 20 chr15 13626022 13626367 -89868607 - Lx3_Mus LINE L1 -22 6987 6646 1 688 3428 117 2 2 chr15 13626363 13626875 -89868099 + Lx3_Mus LINE L1 6149 6660 -349 1 688 482 328 109 78 chr15 13627094 13627772 -89867202 + Tigger6a DNA MER2_type 373 1071 -12 1 688 3504 215 45 22 chr15 13628066 13629141 -89865833 + Lx6 LINE L1 5062 6166 -1294 1 688 765 182 19 0 chr15 13629142 13629296 -89865678 + Lx6 LINE L1 7296 7452 -8 1 688 2170 104 6 24 chr15 13629300 13629634 -89865340 + Lx3B LINE L1 6640 6967 -6 1 688 240 288 109 58 chr15 13629746 13630059 -89864915 - BLACKJACK DNA AcHobo -6 2938 2610 1 688 726 295 109 68 chr15 13630619 13631226 -89863748 - BLACKJACK DNA AcHobo -1684 1260 629 1 10 245 368 74 21 chr15 13631355 13631544 -89863430 - BLACKJACK DNA AcHobo -2511 433 235 1 689 3589 102 11 73 chr15 13632089 13632703 -89862271 + Lx LINE L1 6076 6651 -3 1 689 486 0 0 0 chr15 13632829 13632883 -89862091 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 689 26 0 0 0 chr15 13632883 13632909 -89862065 + AT_rich Low_complexity Low_complexity 1 26 0 2 689 5187 148 43 8 chr15 13633002 13633941 -89861033 - Lx3_Mus LINE L1 -3 7006 6035 2 689 1342 85 30 176 chr15 13633953 13634254 -89860720 - L1_Mus1 LINE L1 0 6567 6311 2 689 2029 86 17 3 chr15 13634251 13634543 -89860431 - Lx3_Mus LINE L1 -969 6040 5745 2 689 1347 326 83 16 chr15 13635372 13635936 -89859038 + MLT1H-int LTR MaLR 32 633 -776 2 689 612 331 98 43 chr15 13636178 13636547 -89858427 + MLT1H-int LTR MaLR 944 1332 -77 2 689 1364 281 62 11 chr15 13636664 13637035 -89857939 + MTD LTR MaLR 18 407 -12 2 689 793 348 59 18 chr15 13637392 13637731 -89857243 - MLT1A0 LTR MaLR -3 362 10 2 689 2756 88 25 22 chr15 13637800 13638206 -89856768 - MTB_Mm LTR MaLR 0 407 1 2 689 717 119 0 8 chr15 13638206 13638333 -89856641 - MTB_Mm-int LTR MaLR 0 1098 973 2 689 1992 94 49 67 chr15 13638333 13638662 -89856312 - ORR1A2 LTR MaLR 0 327 5 2 689 26 0 0 0 chr15 13639059 13639085 -89855889 + AT_rich Low_complexity Low_complexity 1 26 0 2 689 4786 49 0 3 chr15 13640000 13640598 -89854376 - L1Md_F3 LINE L1 -14 6570 5975 2 689 1674 30 0 0 chr15 13640598 13640799 -89854175 + L1Md_F3 LINE L1 5722 5922 -662 2 689 1907 128 40 7 chr15 13640828 13641127 -89853847 + RLTR27 LTR ERVK 1 309 0 2 689 371 67 7 0 chr15 13641152 13641205 -89853769 + RLTR10-int LTR ERVK 163 267 -7314 2 689 632 254 46 41 chr15 13641237 13641434 -89853540 + RLTR10-int LTR ERVK 655 852 -1135 2 689 1262 336 50 19 chr15 13641833 13642588 -89852386 + IAP-d-int LTR ERVK 705 1483 -5059 2 689 1207 279 29 29 chr15 13642602 13643048 -89851926 + MMERVK10C-int LTR ERVK 3105 3515 -4066 2 689 1139 256 47 49 chr15 13643138 13643606 -89851368 + MMERVK10C-int LTR ERVK 5011 5477 -2104 2 689 342 299 37 31 chr15 13644095 13644257 -89850717 + MMERVK10C-int LTR ERVK 6907 7069 -512 2 689 1483 141 23 27 chr15 13644395 13644657 -89850317 + MMERVK10C-int LTR ERVK 7321 7581 0 2 689 2119 102 13 7 chr15 13644657 13644964 -89850010 + RLTR27 LTR ERVK 1 309 0 2 689 325 214 44 77 chr15 13644967 13644983 -89849991 + ORR1D2 LTR MaLR 228 243 -127 2 689 315 0 0 0 chr15 13644983 13645018 -89849956 + (TTAA)n Simple_repeat Simple_repeat 3 37 0 2 689 325 214 44 77 chr15 13645018 13645092 -89849882 + ORR1D2 LTR MaLR 244 314 -56 2 689 213 211 0 0 chr15 13645092 13645130 -89849844 + CT-rich Low_complexity Low_complexity 1 38 0 2 689 772 48 57 0 chr15 13645144 13645249 -89849725 + L1_Mus4 LINE L1 6364 6474 -162 2 689 343 165 9 134 chr15 13645244 13645356 -89849618 + L1_Mus4 LINE L1 6539 6636 0 2 689 230 224 0 0 chr15 13645364 13645413 -89849561 + ORR1D2 LTR MaLR 324 372 -2 2 689 324 0 0 0 chr15 13645992 13646028 -89848946 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 689 32 26 0 0 chr15 13646040 13646079 -89848895 + AT_rich Low_complexity Low_complexity 1 39 0 2 689 6182 155 27 22 chr15 13647004 13647611 -89847363 - Lx3B LINE L1 -10 6963 6345 2 689 266 0 0 29 chr15 13647611 13647646 -89847328 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 689 6182 155 27 22 chr15 13647646 13648195 -89846779 - Lx3B LINE L1 -629 6344 5802 2 689 11615 122 62 168 chr15 13648195 13649517 -89845457 - Lx3B LINE L1 -456 5430 4579 2 689 8161 34 4 0 chr15 13649517 13650483 -89844491 + L1Md_F3 LINE L1 5599 6568 -16 2 689 11615 122 62 168 chr15 13650483 13652186 -89842788 - Lx3B LINE L1 -1308 4578 2726 2 689 455 48 0 16 chr15 13652215 13652278 -89842696 + (TTCC)n Simple_repeat Simple_repeat 4 65 0 2 689 239 143 0 0 chr15 13652280 13652322 -89842652 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 2 689 311 333 117 0 chr15 13652563 13652872 -89842102 - L1M4 LINE L1 -556 5623 5279 2 689 609 308 56 63 chr15 13652932 13653327 -89841647 - L1MD LINE L1 -906 5240 4849 2 689 32 98 0 0 chr15 13653791 13653893 -89841081 + AT_rich Low_complexity Low_complexity 1 102 0 2 689 239 54 27 0 chr15 13654026 13654063 -89840911 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2 689 244 310 17 0 chr15 13654092 13654150 -89840824 - PB1D7 SINE Alu -61 59 1 2 689 341 299 35 35 chr15 13654203 13654435 -89840539 - L1M4 LINE L1 -1450 4696 4465 2 689 203 125 25 0 chr15 13654483 13654523 -89840451 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 689 2310 86 0 19 chr15 13655111 13655433 -89839541 - L1_Mus1 LINE L1 0 6567 6252 2 689 639 53 0 0 chr15 13655433 13655509 -89839465 + L1_Mus1 LINE L1 6189 6264 -303 2 689 195 188 0 0 chr15 13656071 13656119 -89838855 + T-rich Low_complexity Low_complexity 1 48 0 2 689 4689 72 31 43 chr15 13656128 13656800 -89838174 - L1Md_F2 LINE L1 -10 6572 5909 2 689 2288 107 9 3 chr15 13656805 13657151 -89837823 - Lx LINE L1 -1 6653 6306 2 689 3917 58 12 0 chr15 13657258 13657755 -89837219 - L1Md_F2 LINE L1 -2 6580 6078 2 689 1093 89 0 0 chr15 13657981 13658127 -89836847 + B1_Mus1 SINE Alu 3 148 0 2 689 26 30 0 0 chr15 13658127 13658160 -89836814 + AT_rich Low_complexity Low_complexity 1 33 0 2 689 273 89 0 0 chr15 13658525 13658570 -89836404 + (T)n Simple_repeat Simple_repeat 1 45 0 2 689 28 29 0 0 chr15 13659163 13659198 -89835776 + AT_rich Low_complexity Low_complexity 1 35 0 2 689 200 143 24 0 chr15 13659333 13659375 -89835599 + (CAGT)n Simple_repeat Simple_repeat 4 46 0 2 689 384 119 0 0 chr15 13660003 13660062 -89834912 + (T)n Simple_repeat Simple_repeat 1 59 0 2 689 634 296 0 60 chr15 13660309 13660460 -89834514 + RSINE1 SINE B4 3 144 -21 2 689 481 314 28 28 chr15 13660998 13661139 -89833835 + RSINE1 SINE B4 3 143 -22 2 689 24 32 0 0 chr15 13661189 13661220 -89833754 + AT_rich Low_complexity Low_complexity 1 31 0 2 689 235 276 76 30 chr15 13661521 13661652 -89833322 - L1M3 LINE L1 -1921 4219 4083 2 689 2501 135 41 14 chr15 13662592 13663006 -89831968 - Lx4A LINE L1 0 7058 6634 2 689 1157 0 8 0 chr15 13663819 13663952 -89831022 + (GAA)n Simple_repeat Simple_repeat 1 134 0 2 689 259 266 64 9 chr15 13665390 13665500 -89829474 - L1MA9 LINE L1 -330 5982 5867 2 689 624 301 101 34 chr15 13666104 13666551 -89828423 - L1MA9 LINE L1 -5 6307 5831 2 689 272 313 99 54 chr15 13666663 13666886 -89828088 - L1MA9 LINE L1 -375 5793 5561 2 689 261 151 0 0 chr15 13666943 13666996 -89827978 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 689 416 252 13 160 chr15 13667024 13667180 -89827794 - B4 SINE B4 0 292 160 2 689 336 296 71 36 chr15 13667294 13667462 -89827512 - L1MA9 LINE L1 -2454 5428 5255 2 689 336 327 18 9 chr15 13667479 13667590 -89827384 + ORR1C1 LTR MaLR 6 117 -261 2 689 435 38 0 0 chr15 13667684 13667737 -89827237 + (TCTCC)n Simple_repeat Simple_repeat 4 56 0 2 689 240 318 25 43 chr15 13667737 13667791 -89827183 + ORR1C1 LTR MaLR 205 259 -111 2 689 676 248 0 41 chr15 13667791 13667938 -89827036 - B1_Mur2 SINE Alu -7 142 2 2 689 256 290 31 23 chr15 13667938 13668044 -89826930 + ORR1C1 LTR MaLR 260 366 -8 2 689 228 348 12 18 chr15 13668068 13668232 -89826742 - L1MA9 LINE L1 -938 5202 5040 2 689 292 354 126 0 chr15 13668872 13668999 -89825975 - B1F SINE Alu -6 143 1 2 689 25 0 0 0 chr15 13669740 13669765 -89825209 + AT_rich Low_complexity Low_complexity 1 25 0 2 689 619 214 20 20 chr15 13669957 13670105 -89824869 - B1_Mur2 SINE Alu -1 148 1 2 689 5555 64 14 5 chr15 13670135 13670870 -89824104 + L1Md_F2 LINE L1 5829 6569 -13 2 689 23 0 0 0 chr15 13670873 13670896 -89824078 + AT_rich Low_complexity Low_complexity 1 23 0 2 689 435 68 0 0 chr15 13670922 13670981 -89823993 + (TCTA)n Simple_repeat Simple_repeat 1 59 0 2 689 284 409 39 59 chr15 13671360 13671646 -89823328 - B4A SINE B4 -12 280 1 2 689 6099 40 0 0 chr15 13671893 13672624 -89822350 - L1Md_T LINE L1 0 6582 5852 2 689 506 281 78 15 chr15 13672671 13672985 -89821989 - L1_Mur3 LINE L1 -1331 2583 2253 2 689 225 0 0 0 chr15 13672993 13673018 -89821956 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 689 183 42 0 0 chr15 13673085 13673109 -89821865 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 689 553 280 29 35 chr15 13673111 13673285 -89821689 - B3 SINE B2 -43 173 1 2 689 274 254 14 0 chr15 13673286 13673357 -89821617 - L1M2 LINE L1 -3642 2907 2836 2 689 2980 120 12 10 chr15 13673367 13673846 -89821128 + L1_Mus3 LINE L1 6158 6637 -1 2 689 487 327 82 35 chr15 13674020 13674738 -89820236 - L1M2 LINE L1 -4238 2611 1941 2 689 387 194 0 0 chr15 13675592 13675690 -89819284 + GA-rich Low_complexity Low_complexity 2 99 0 2 689 276 224 0 33 chr15 13675938 13675998 -89818976 + RLTR25A LTR ERVK 515 572 -531 2 689 685 86 0 0 chr15 13675946 13676039 -89818935 + B1_Mus2 SINE Alu 47 139 -8 2 689 207 0 0 0 chr15 13676039 13676062 -89818912 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 689 182 197 25 38 chr15 13676155 13676234 -89818740 + CT-rich Low_complexity Low_complexity 1 78 0 2 689 392 241 119 8 chr15 13676985 13677119 -89817855 + MER34 LTR ERV1 394 542 0 2 689 548 279 16 38 chr15 13678421 13678604 -89816370 + AmnSINE1 SINE SINE 216 394 -181 2 689 306 346 12 0 chr15 13679825 13679906 -89815068 + RSINE1 SINE B4 54 135 -30 2 689 357 24 0 0 chr15 13679911 13679953 -89815021 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 689 699 138 0 0 chr15 13679953 13680105 -89814869 + (GA)n Simple_repeat Simple_repeat 1 152 0 2 689 204 125 0 0 chr15 13680950 13680982 -89813992 + (A)n Simple_repeat Simple_repeat 1 32 0 2 689 271 207 111 33 chr15 13681020 13681110 -89813864 - MIRb SINE MIR -26 242 146 2 689 182 371 33 11 chr15 13682540 13682630 -89812344 - MIR SINE MIR -114 148 57 2 689 316 273 64 54 chr15 13682764 13682943 -89812031 + MIRb SINE MIR 2 187 -81 2 689 714 335 65 15 chr15 13683006 13683345 -89811629 + MLT1A0 LTR MaLR 10 365 0 2 689 308 255 21 11 chr15 13684414 13684509 -89810465 + (TATATG)n Simple_repeat Simple_repeat 1 96 0 2 689 353 379 75 24 chr15 13684778 13685111 -89809863 - MLT1D LTR MaLR -122 383 34 2 689 4957 82 46 6 chr15 13685758 13686471 -89808503 - Lx3_Mus LINE L1 0 7009 6268 2 689 4163 82 1 85 chr15 13686471 13687166 -89807808 + L1_Mur1 LINE L1 4075 4711 -1175 2 689 785 106 30 0 chr15 13687162 13687294 -89807680 + Lx3_Mus LINE L1 5981 6116 -893 2 689 537 296 31 26 chr15 13687294 13687485 -89807489 + B3 SINE B2 1 192 -24 2 689 2214 98 35 6 chr15 13687707 13688025 -89806949 + ORR1A2 LTR MaLR 1 327 0 2 689 233 331 38 8 chr15 13690026 13690157 -89804817 + Lx7 LINE L1 6090 6224 -1472 2 689 245 246 15 30 chr15 13690682 13690749 -89804225 - MTEb LTR MaLR -18 361 296 2 689 1137 156 61 14 chr15 13690823 13691037 -89803937 + RLTR17 LTR ERVK 145 368 -324 2 689 594 0 0 0 chr15 13691039 13691105 -89803869 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 689 572 346 26 19 chr15 13692398 13692669 -89802305 - Lx9 LINE L1 -314 7330 7058 2 689 248 279 45 0 chr15 13692724 13692835 -89802139 + Lx9 LINE L1 7502 7617 -27 2 689 921 104 0 0 chr15 13693678 13693813 -89801161 + (GGGAGA)n Simple_repeat Simple_repeat 4 138 0 2 689 2150 197 3 15 chr15 13696705 13697096 -89797878 + ORR1B1 LTR MaLR 1 386 -8 2 689 640 132 9 0 chr15 13697100 13697206 -89797768 + ORR1B1-int LTR MaLR 1 107 -1856 2 689 3450 203 81 19 chr15 13697207 13698051 -89796923 + ORR1B1-int LTR MaLR 614 1509 0 2 689 1837 171 76 33 chr15 13698059 13698427 -89796547 + ORR1B1 LTR MaLR 9 392 -2 2 689 5259 34 5 0 chr15 13699233 13699858 -89795116 + L1Md_F3 LINE L1 5942 6569 -15 3 689 1210 198 172 66 chr15 13699880 13700334 -89794640 - Lx9 LINE L1 -22 7622 7121 3 689 1002 97 0 0 chr15 13700335 13700479 -89794495 + (TTTTC)n Simple_repeat Simple_repeat 2 145 0 3 689 966 108 7 0 chr15 13700483 13700622 -89794352 - B1_Mus2 SINE Alu -6 141 2 3 689 522 0 0 0 chr15 13700683 13700741 -89794233 + (TC)n Simple_repeat Simple_repeat 1 58 0 3 689 399 83 0 0 chr15 13700741 13700800 -89794174 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 689 1177 278 151 41 chr15 13701242 13701883 -89793091 - Lx9 LINE L1 -160 7484 6773 3 689 215 259 19 0 chr15 13701884 13701938 -89793036 + (TATATG)n Simple_repeat Simple_repeat 3 57 0 3 689 582 15 0 0 chr15 13703317 13703384 -89791590 + (TC)n Simple_repeat Simple_repeat 1 67 0 3 689 249 206 27 164 chr15 13703464 13703574 -89791400 + MTEa LTR MaLR 282 376 -3 3 689 669 309 67 78 chr15 13704523 13704884 -89790090 + ORR1E LTR MaLR 1 357 -2 3 689 1041 333 62 41 chr15 13705361 13705943 -89789031 - Lx7 LINE L1 -1021 6675 6082 3 689 508 408 40 45 chr15 13707376 13707688 -89787286 - MLT2B2 LTR ERVL -93 422 110 3 689 630 0 0 0 chr15 13707688 13707758 -89787216 + (TTTTC)n Simple_repeat Simple_repeat 1 70 0 3 689 1112 37 0 0 chr15 13707758 13707893 -89787081 - B1_Mm SINE Alu -12 135 1 3 689 508 408 40 45 chr15 13707893 13708002 -89786972 - MLT2B2 LTR ERVL -406 109 3 3 689 1160 160 5 22 chr15 13709107 13709331 -89785643 - Lx4A LINE L1 -834 6224 6005 3 689 4684 169 29 11 chr15 13709331 13710137 -89784837 + Lx4A LINE L1 6236 7055 -3 3 689 976 80 65 0 chr15 13710215 13710353 -89784621 + B1_Mus2 SINE Alu 1 147 0 3 689 308 300 109 0 chr15 13710731 13710841 -89784133 - MER94 DNA AcHobo 0 134 13 3 689 23 0 0 0 chr15 13713059 13713082 -89781892 + AT_rich Low_complexity Low_complexity 1 23 0 3 689 3342 34 0 7 chr15 13713314 13713724 -89781250 + L1Md_F3 LINE L1 6162 6568 -16 3 689 303 49 0 0 chr15 13713725 13713766 -89781208 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 689 180 0 0 0 chr15 13713766 13713785 -89781189 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 689 270 0 0 0 chr15 13713841 13713871 -89781103 + (T)n Simple_repeat Simple_repeat 1 30 0 3 689 206 302 58 12 chr15 13714348 13714445 -89780529 - MIR SINE MIR -126 142 38 3 689 238 310 69 0 chr15 13716162 13716249 -89778725 + MamGypLTR2c LTR Gypsy 950 1042 -26 3 689 44 0 0 0 chr15 13717008 13717052 -89777922 + AT_rich Low_complexity Low_complexity 1 44 0 3 689 1124 88 0 0 chr15 13717143 13717290 -89777684 + B1_Mus2 SINE Alu 1 147 0 3 689 231 36 0 0 chr15 13717318 13717346 -89777628 + (TA)n Simple_repeat Simple_repeat 1 28 0 3 689 1055 308 101 33 chr15 13717943 13718397 -89776577 + Lx8 LINE L1 6185 6669 -804 3 689 183 80 0 0 chr15 13718888 13718913 -89776061 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 3 689 285 51 0 0 chr15 13718913 13718952 -89776022 + (TTAA)n Simple_repeat Simple_repeat 3 41 0 3 689 941 59 0 123 chr15 13718952 13719106 -89775868 - B1_Mm SINE Alu -12 135 1 3 689 449 239 18 9 chr15 13719112 13719226 -89775748 + Lx5 LINE L1 6936 7050 0 3 689 851 184 129 30 chr15 13719280 13719482 -89775492 + URR1A DNA MER1_type 5 226 0 3 689 3389 28 5 0 chr15 13719518 13719912 -89775062 - MTA_Mm LTR MaLR 0 396 1 3 689 8616 46 22 0 chr15 13719912 13720986 -89773988 - MTA_Mm-int LTR MaLR 0 1098 1 3 689 3077 39 33 28 chr15 13720988 13721382 -89773592 - MTA_Mm LTR MaLR 0 396 1 3 689 369 0 0 0 chr15 13722128 13722169 -89772805 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 689 398 292 57 24 chr15 13722182 13722305 -89772669 - B3A SINE B2 -46 152 26 3 689 257 319 72 67 chr15 13722515 13722710 -89772264 - ORR1E LTR MaLR -163 196 1 3 689 439 283 0 0 chr15 13722964 13723063 -89771911 - B3A SINE B2 -98 100 2 3 689 21 0 0 0 chr15 13723498 13723519 -89771455 + AT_rich Low_complexity Low_complexity 1 21 0 3 689 536 265 84 195 chr15 13724974 13725354 -89769620 + MT2B LTR ERVL 3 476 -125 3 689 258 220 0 0 chr15 13725408 13725467 -89769507 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 3 689 243 265 216 0 chr15 13725498 13725600 -89769374 - MER2 DNA MER2_type -199 146 23 3 689 21 36 0 0 chr15 13725663 13725691 -89769283 + AT_rich Low_complexity Low_complexity 1 28 0 3 689 330 373 139 6 chr15 13725823 13726290 -89768684 - L1ME1 LINE L1 -331 5848 5320 3 689 21 36 0 0 chr15 13726300 13726328 -89768646 + AT_rich Low_complexity Low_complexity 1 28 0 3 689 1050 194 27 14 chr15 13726472 13726692 -89768282 + URR1A DNA MER1_type 1 223 -3 3 689 303 279 156 14 chr15 13726899 13727110 -89767864 + L1M2 LINE L1 3027 3267 -2876 3 689 512 368 29 5 chr15 13729151 13729356 -89765618 + B3 SINE B2 7 216 0 3 689 28 36 0 35 chr15 13729445 13729460 -89765514 + AT_rich Low_complexity Low_complexity 1 14 0 3 689 486 0 0 0 chr15 13729460 13729514 -89765460 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 689 28 36 0 35 chr15 13729514 13729555 -89765419 + AT_rich Low_complexity Low_complexity 1 41 0 3 689 2020 190 90 37 chr15 13729663 13730172 -89764802 - RMER6C LTR ERVK -4 686 151 3 689 210 71 0 0 chr15 13730658 13730686 -89764288 + (TATG)n Simple_repeat Simple_repeat 3 30 0 3 689 520 298 23 1 chr15 13730689 13730840 -89764134 - B3A SINE B2 -53 163 9 3 689 443 243 53 26 chr15 13731090 13731204 -89763770 - ORR1D2 LTR MaLR -5 365 249 3 689 8036 228 63 29 chr15 13731235 13734392 -89760582 + Lx7 LINE L1 354 3614 -2266 3 689 905 221 14 0 chr15 13734391 13734599 -89760375 + Lx7 LINE L1 4983 5193 -687 3 689 2986 260 55 18 chr15 13734604 13735473 -89759501 + Lx7 LINE L1 5784 6684 -1012 3 689 631 127 0 41 chr15 13735474 13735597 -89759377 - L1_Mur2 LINE L1 -1229 4648 4531 3 689 4545 216 113 30 chr15 13735592 13735747 -89759227 - L1_Mur2 LINE L1 -2655 3222 3059 3 689 780 11 0 0 chr15 13735747 13735836 -89759138 + (TG)n Simple_repeat Simple_repeat 2 90 0 3 689 4545 216 113 30 chr15 13735836 13737196 -89757778 - L1_Mur2 LINE L1 -2819 3058 1582 3 689 11717 172 21 23 chr15 13737236 13740547 -89754427 - Lx3C LINE L1 -2 6974 3659 3 689 4733 172 36 3 chr15 13740541 13741488 -89753486 - Lx3C LINE L1 -3421 2465 1488 3 689 4410 100 50 2 chr15 13741487 13742121 -89752853 - Lx3A LINE L1 -178 6803 6139 3 689 6038 78 23 5 chr15 13742113 13742345 -89752629 + Lx3A LINE L1 5037 5268 -618 3 689 283 23 45 0 chr15 13742345 13742389 -89752585 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 3 689 6038 75 19 14 chr15 13742389 13743087 -89751887 + Lx3A LINE L1 5269 5971 -1010 3 689 1245 215 31 41 chr15 13743119 13743344 -89751630 - Lx3C LINE L1 -4283 1594 1362 3 689 236 53 26 0 chr15 13743344 13743382 -89751592 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 689 1148 56 14 0 chr15 13743382 13743525 -89751449 - B1_Mm SINE Alu -2 145 1 3 689 1245 234 36 30 chr15 13743525 13743905 -89751069 - Lx3C LINE L1 -4516 1361 984 3 689 3135 53 0 10 chr15 13745061 13745461 -89749513 - MTA_Mm LTR MaLR 0 396 1 3 689 7473 77 37 1 chr15 13745461 13746184 -89748790 - MTA_Mm-int LTR MaLR 0 1098 349 3 689 1330 98 9 40 chr15 13746184 13746408 -89748566 - L1Md_F2 LINE L1 0 6582 6366 3 689 7473 77 37 1 chr15 13746408 13746744 -89748230 - MTA_Mm-int LTR MaLR -750 348 2 3 689 3131 61 0 5 chr15 13746744 13747142 -89747832 - MTA_Mm LTR MaLR 0 396 1 3 689 325 399 19 5 chr15 13747184 13747398 -89747576 + L2 LINE L2 1814 2030 -1389 3 689 333 0 0 0 chr15 13747590 13747627 -89747347 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 689 279 0 0 0 chr15 13747687 13747718 -89747256 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 689 381 233 22 0 chr15 13747751 13747841 -89747133 - Lx9 LINE L1 -597 7047 6956 3 689 191 188 21 0 chr15 13747842 13747890 -89747084 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 689 23 33 0 0 chr15 13747973 13748003 -89746971 + AT_rich Low_complexity Low_complexity 1 30 0 3 689 455 0 18 0 chr15 13749074 13749129 -89745845 + (TC)n Simple_repeat Simple_repeat 1 56 0 3 689 276 321 97 18 chr15 13749149 13749263 -89745711 - Lx9 LINE L1 -358 7286 7164 3 689 270 0 0 0 chr15 13749276 13749306 -89745668 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 689 1405 319 42 14 chr15 13749339 13749892 -89745082 - Lx9 LINE L1 -597 7047 6480 3 689 3028 90 58 2 chr15 13751386 13751820 -89743154 - L1_Mus4 LINE L1 -2 6634 6177 3 689 1722 87 4 0 chr15 13751826 13752056 -89742918 + L1_Mus4 LINE L1 5921 6151 -485 3 689 327 78 0 0 chr15 13752113 13752164 -89742810 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 689 330 243 0 0 chr15 13753484 13753587 -89741387 + (CA)n Simple_repeat Simple_repeat 2 104 0 3 689 692 196 6 0 chr15 13753631 13753810 -89741164 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 689 320 59 0 19 chr15 13754117 13754169 -89740805 + (CAAAAA)n Simple_repeat Simple_repeat 4 54 0 3 689 703 289 78 5 chr15 13755349 13755554 -89739420 - MTC LTR MaLR -3 418 199 3 689 1558 281 34 40 chr15 13755566 13756066 -89738908 - Lx5 LINE L1 -11 7039 6543 3 689 888 208 67 29 chr15 13756078 13756286 -89738688 - MTC LTR MaLR -205 216 1 3 689 23 0 0 0 chr15 13756306 13756329 -89738645 + AT_rich Low_complexity Low_complexity 1 23 0 3 689 397 234 191 41 chr15 13756673 13756820 -89738154 + MLT1B LTR MaLR 5 173 -217 3 689 406 238 159 45 chr15 13757395 13757571 -89737403 + MLT1B LTR MaLR 189 384 -6 3 689 378 0 0 0 chr15 13757964 13758006 -89736968 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 689 324 83 0 0 chr15 13758096 13758144 -89736830 + (TTG)n Simple_repeat Simple_repeat 1 48 0 3 689 852 155 0 0 chr15 13759031 13759251 -89735723 + CT-rich Low_complexity Low_complexity 1 220 0 3 689 6834 104 57 14 chr15 13760513 13761563 -89733411 - Lx3B LINE L1 -202 6771 5677 3 689 538 172 34 0 chr15 13761567 13761706 -89733268 + Lx3B LINE L1 6785 6970 -3 3 689 204 158 0 0 chr15 13761711 13761749 -89733225 + (TAA)n Simple_repeat Simple_repeat 2 39 0 3 689 24 32 0 0 chr15 13762510 13762541 -89732433 + AT_rich Low_complexity Low_complexity 1 31 0 3 690 562 254 26 47 chr15 13763574 13763764 -89731210 + RLTR14 LTR ERV1 3 188 -194 3 690 405 39 0 0 chr15 13763789 13763840 -89731134 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 690 788 381 46 33 chr15 13764336 13764876 -89730098 - MLT1E2 LTR MaLR 0 627 81 3 690 213 39 0 0 chr15 13765071 13765097 -89729877 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 690 396 0 0 0 chr15 13767351 13767395 -89727579 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 3 690 1824 98 139 6 chr15 13768167 13768497 -89726477 + L1_Mus4 LINE L1 6261 6634 -2 3 690 11338 86 3 0 chr15 13768527 13770113 -89724861 + L1_Mm LINE L1 1319 2909 -2974 3 690 352 225 29 170 chr15 13770301 13770542 -89724432 - Lx7 LINE L1 -7 7689 7483 3 690 3665 47 0 2 chr15 13770781 13771230 -89723744 - L1Md_T LINE L1 0 6582 6135 3 690 21 36 0 0 chr15 13771691 13771719 -89723255 + AT_rich Low_complexity Low_complexity 1 28 0 3 690 342 323 49 87 chr15 13774217 13774400 -89720574 + MLT1A1 LTR MaLR 23 198 -210 4 690 365 278 102 54 chr15 13774595 13774800 -89720174 + B3 SINE B2 2 216 0 4 690 235 65 43 0 chr15 13775339 13775385 -89719589 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 4 690 1143 59 0 0 chr15 13775445 13775597 -89719377 - L1_Mus2 LINE L1 -1 6565 6414 4 690 464 338 59 42 chr15 13775597 13775879 -89719095 + ORR1E LTR MaLR 68 355 -4 4 690 905 279 25 8 chr15 13775959 13776194 -89718780 + ORR1D1 LTR MaLR 3 241 -133 4 690 198 0 0 0 chr15 13776194 13776216 -89718758 + (T)n Simple_repeat Simple_repeat 1 22 0 4 690 2089 183 11 16 chr15 13776399 13776765 -89718209 - MTC LTR MaLR 0 421 58 4 690 12225 28 0 0 chr15 13776765 13778862 -89716112 - L1Md_T LINE L1 -25 6557 4461 4 690 8973 16 0 0 chr15 13778861 13779905 -89715069 + L1Md_T LINE L1 3438 4481 -1402 4 690 343 293 19 39 chr15 13779905 13780008 -89714966 + ORR1D1 LTR MaLR 230 330 -44 4 690 3904 174 6 27 chr15 13780059 13780881 -89714093 + L1_Mur1 LINE L1 2776 3580 -2306 4 690 961 207 0 0 chr15 13780882 13781099 -89713875 + L1_Mur1 LINE L1 3802 4018 -1859 4 690 7729 145 64 3 chr15 13781097 13782420 -89712554 + Lx4A LINE L1 5653 7056 -2 4 690 245 311 159 20 chr15 13782738 13782889 -89712085 + Lx8 LINE L1 7019 7190 -283 4 690 305 268 121 47 chr15 13782944 13783093 -89711881 + RMER15 LTR ERVL 403 562 -13 4 690 405 0 0 0 chr15 13783758 13783803 -89711171 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 690 357 256 51 38 chr15 13785505 13785663 -89709311 - L1MB5 LINE L1 0 6184 6025 4 690 356 353 63 40 chr15 13785836 13786010 -89708964 - MLT1A1 LTR MaLR -230 178 1 4 690 273 242 48 30 chr15 13786061 13786189 -89708785 - L1MB5 LINE L1 -246 5928 5796 4 690 351 289 53 76 chr15 13786217 13786479 -89708495 - L1MB5 LINE L1 -448 5736 5481 4 690 333 268 53 18 chr15 13786534 13786733 -89708241 - L1MB5 LINE L1 -713 5467 5262 4 690 747 236 55 16 chr15 13787167 13787491 -89707483 - L1M2 LINE L1 -524 5659 5313 4 690 630 159 33 155 chr15 13787499 13787744 -89707230 - Lx9 LINE L1 -8 7636 7422 4 690 546 286 0 48 chr15 13787775 13787922 -89707052 - B1F1 SINE Alu 0 149 10 4 690 639 274 66 16 chr15 13788032 13788214 -89706760 - B3A SINE B2 -6 192 2 4 690 726 284 107 26 chr15 13788244 13788627 -89706347 - L1M2 LINE L1 -892 5251 4838 4 690 634 315 39 28 chr15 13788624 13788908 -89706066 + L1MA5 LINE L1 5652 5938 -362 4 690 342 80 0 0 chr15 13789033 13789083 -89705891 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 690 314 325 46 28 chr15 13791887 13792213 -89702761 - L1MC4 LINE L1 -721 7321 6990 4 690 281 225 0 40 chr15 13792999 13793073 -89701901 + GA-rich Low_complexity Low_complexity 2 72 0 4 690 180 0 0 0 chr15 13793160 13793180 -89701794 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 690 23 33 0 0 chr15 13794133 13794163 -89700811 + AT_rich Low_complexity Low_complexity 1 30 0 4 690 1489 99 5 0 chr15 13794872 13795083 -89699891 - L1_Mus2 LINE L1 -1 6565 6354 4 690 22028 141 9 22 chr15 13795084 13799490 -89695484 - L1Md_F LINE L1 -1130 4756 434 4 690 21 0 0 0 chr15 13799688 13799709 -89695265 + AT_rich Low_complexity Low_complexity 1 21 0 4 690 441 0 0 0 chr15 13800777 13800826 -89694148 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 690 1764 207 25 28 chr15 13801004 13801397 -89693577 + ORR1B1 LTR MaLR 3 394 0 4 690 1054 78 14 14 chr15 13801526 13801669 -89693305 + B1_Mus1 SINE Alu 1 143 -5 4 690 21 36 0 0 chr15 13802923 13802951 -89692023 + AT_rich Low_complexity Low_complexity 1 28 0 4 690 208 246 0 0 chr15 13803400 13803457 -89691517 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 690 322 359 120 41 chr15 13803870 13803976 -89690998 - MER2 DNA MER2_type -2 343 244 4 690 528 321 5 5 chr15 13803976 13804164 -89690810 - B3A SINE B2 -9 189 2 4 690 322 359 120 41 chr15 13804164 13804374 -89690600 - MER2 DNA MER2_type -102 243 2 4 690 628 223 179 11 chr15 13805678 13805868 -89689106 + URR1A DNA MER1_type 5 226 0 4 690 423 338 77 52 chr15 13806150 13806500 -89688474 + ORR1E LTR MaLR 2 367 -3 4 690 1315 282 32 75 chr15 13806502 13807124 -89687850 + ORR1E-int LTR MaLR 2 624 -956 4 690 1102 141 17 6 chr15 13807248 13807426 -89687548 - B2_Mm2 SINE B2 -14 181 2 4 690 24 0 0 0 chr15 13807626 13807650 -89687324 + AT_rich Low_complexity Low_complexity 1 24 0 4 690 395 247 112 56 chr15 13808621 13808818 -89686156 - Lx8 LINE L1 -1 7472 7265 4 690 501 327 39 34 chr15 13808894 13809100 -89685874 - RCHARR1 DNA MER1_type -759 215 9 4 690 326 321 14 49 chr15 13809246 13809390 -89685584 + L1_Mur2 LINE L1 53 191 -7537 4 690 1592 240 66 121 chr15 13809388 13809752 -89685222 + L1_Mur2 LINE L1 1036 1394 -4486 4 690 273 98 0 0 chr15 13809752 13809793 -89685181 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 690 1592 203 84 184 chr15 13809793 13810412 -89684562 + L1_Mur2 LINE L1 1395 1935 -3945 4 690 673 112 19 0 chr15 13810425 13810532 -89684442 + MT2C_Mm LTR ERVL 290 398 -77 4 690 36383 31 1 8 chr15 13810596 13815785 -89679189 + L1Md_T LINE L1 440 5586 -297 4 690 7895 39 26 0 chr15 13815785 13816756 -89678218 + L1Md_T LINE L1 5587 6582 0 4 690 1357 243 58 24 chr15 13816837 13817166 -89677808 + Lx6 LINE L1 6985 7324 -136 4 690 8273 48 2 1 chr15 13817165 13818892 -89676082 - L1Md_F2 LINE L1 -2 6580 4851 4 690 418 202 48 0 chr15 13818892 13818996 -89675978 + Lx6 LINE L1 7341 7449 -11 4 690 425 268 153 12 chr15 13819784 13820015 -89674959 + Tigger5 DNA MER2_type 2119 2406 0 4 690 1557 244 63 10 chr15 13820394 13820788 -89674186 - MTD LTR MaLR 0 419 5 4 690 510 17 0 0 chr15 13821103 13821162 -89673812 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 690 25 51 0 0 chr15 13821734 13821773 -89673201 + AT_rich Low_complexity Low_complexity 1 39 0 4 690 351 0 0 0 chr15 13824704 13824743 -89670231 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 690 478 241 6 6 chr15 13824788 13824955 -89670019 + CT-rich Low_complexity Low_complexity 3 169 0 4 690 25 31 0 0 chr15 13825845 13825877 -89669097 + AT_rich Low_complexity Low_complexity 1 32 0 4 690 239 294 23 23 chr15 13826030 13826117 -89668857 + L1M4 LINE L1 3600 3686 -2460 4 690 27 0 0 0 chr15 13826361 13826388 -89668586 + AT_rich Low_complexity Low_complexity 1 27 0 4 690 22 35 0 0 chr15 13826764 13826793 -89668181 + AT_rich Low_complexity Low_complexity 1 29 0 4 690 652 40 0 20 chr15 13827225 13827326 -89667648 + L1Md_F3 LINE L1 6472 6570 -14 4 690 22 35 0 0 chr15 13827407 13827436 -89667538 + AT_rich Low_complexity Low_complexity 1 29 0 4 690 649 377 14 34 chr15 13827493 13827784 -89667190 + B4A SINE B4 8 292 0 4 690 396 0 0 0 chr15 13827797 13827841 -89667133 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 690 494 146 0 10 chr15 13828026 13828123 -89666851 + (TA)n Simple_repeat Simple_repeat 1 96 0 4 690 195 204 0 0 chr15 13828728 13828772 -89666202 + (CAGA)n Simple_repeat Simple_repeat 2 45 0 4 690 459 0 0 0 chr15 13828772 13828823 -89666151 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 690 1856 123 61 31 chr15 13829208 13829534 -89665440 + Lx3C LINE L1 6633 6968 -8 4 690 263 238 83 0 chr15 13829840 13829924 -89665050 + L1MD3 LINE L1 7595 7685 -310 4 690 362 242 93 8 chr15 13829984 13830113 -89664861 + L1MC3 LINE L1 7644 7783 -2 4 690 203 32 65 0 chr15 13830826 13830857 -89664117 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 4 690 384 333 29 12 chr15 13832274 13832447 -89662527 - MIRb SINE MIR 0 268 93 4 690 559 120 273 18 chr15 13833729 13833830 -89661144 + B1_Mus1 SINE Alu 9 139 -9 4 690 237 33 0 0 chr15 13833830 13833860 -89661114 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 690 860 300 35 38 chr15 13834131 13834502 -89660472 - ORR1D2 LTR MaLR 0 370 1 4 690 213 39 0 0 chr15 13834620 13834646 -89660328 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 4 690 3528 271 54 9 chr15 13835058 13836008 -89658966 - Lx5 LINE L1 -5 7045 6054 4 690 4708 178 13 0 chr15 13836008 13837000 -89657974 + Lx5 LINE L1 4982 5996 -1054 4 690 22 0 0 0 chr15 13837150 13837172 -89657802 + AT_rich Low_complexity Low_complexity 1 22 0 4 690 277 302 16 32 chr15 13837997 13838120 -89656854 + CT-rich Low_complexity Low_complexity 4 124 0 4 690 2020 113 22 12 chr15 13838502 13838823 -89656151 - Lx LINE L1 0 6654 6331 4 690 588 45 0 74 chr15 13838806 13838901 -89656073 + L1Md_T LINE L1 6494 6581 -1 4 690 31 44 0 0 chr15 13839057 13839102 -89655872 + AT_rich Low_complexity Low_complexity 1 45 0 4 690 645 296 101 92 chr15 13839150 13839455 -89655519 + BGLII_B LTR ERVK 1 326 -115 4 690 1223 109 16 5 chr15 13839455 13839640 -89655334 - B2_Mm2 SINE B2 -5 190 4 4 690 645 296 101 92 chr15 13839640 13839769 -89655205 + BGLII_B LTR ERVK 327 439 -2 4 690 407 100 14 0 chr15 13839808 13839878 -89655096 + (TC)n Simple_repeat Simple_repeat 2 72 0 4 690 566 248 62 72 chr15 13839915 13840124 -89654850 - Lx9 LINE L1 -164 7480 7274 4 690 266 238 112 53 chr15 13840297 13840466 -89654508 + BGLII_B LTR ERVK 21 199 -242 4 690 236 344 81 89 chr15 13840487 13840723 -89654251 + MLT1J LTR MaLR 71 304 -208 4 690 983 102 0 20 chr15 13841127 13841277 -89653697 - B1_Mm SINE Alu 0 147 1 4 690 350 283 167 0 chr15 13841385 13841505 -89653469 + MTEa LTR MaLR 1 140 -239 4 690 278 347 57 24 chr15 13841546 13841877 -89653097 + MT2B2 LTR ERVL 190 581 -3 4 690 526 364 0 12 chr15 13842016 13842180 -89652794 + B3A SINE B2 1 162 -36 4 690 321 118 0 0 chr15 13842189 13842240 -89652734 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 690 251 323 21 0 chr15 13843394 13843487 -89651487 + CT-rich Low_complexity Low_complexity 2 96 0 4 690 180 156 45 30 chr15 13843631 13843697 -89651277 + (CAGAGA)n Simple_repeat Simple_repeat 1 67 0 4 690 740 333 24 49 chr15 13843713 13844041 -89650933 - MLT2D LTR ERVL -94 320 1 4 690 1123 287 75 9 chr15 13844807 13845138 -89649836 - MTEa LTR MaLR -21 358 6 4 690 394 286 67 93 chr15 13845835 13845982 -89648992 + RLTR11B LTR ERVK 94 236 -217 4 690 516 32 0 0 chr15 13845982 13846044 -89648930 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 690 394 286 67 93 chr15 13846044 13846239 -89648735 + RLTR11B LTR ERVK 237 427 -26 4 690 21 36 0 0 chr15 13846566 13846594 -89648380 + AT_rich Low_complexity Low_complexity 1 28 0 4 690 236 184 20 0 chr15 13847047 13847096 -89647878 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 690 28150 34 5 1 chr15 13848113 13852204 -89642770 - L1Md_F2 LINE L1 -16 6566 2462 5 690 195 69 0 0 chr15 13852302 13852331 -89642643 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 5 690 28098 35 5 0 chr15 13852334 13856436 -89638538 - L1Md_T LINE L1 -3 6579 2456 5 690 37785 44 2 3 chr15 13856526 13862783 -89632191 - L1Md_T LINE L1 0 6585 271 5 690 528 371 60 46 chr15 13862803 13863436 -89631538 - Lx8 LINE L1 -4 7469 6828 5 690 183 42 0 0 chr15 13864060 13864084 -89630890 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 690 579 108 0 0 chr15 13864086 13864179 -89630795 + (TA)n Simple_repeat Simple_repeat 2 94 0 5 690 387 0 0 0 chr15 13864332 13864375 -89630599 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 690 771 355 43 4 chr15 13866504 13866761 -89628213 - B4A SINE B4 -5 287 21 5 690 742 312 35 23 chr15 13867721 13868023 -89626951 - MTD LTR MaLR -14 405 111 5 690 6178 132 66 4 chr15 13868023 13869143 -89625831 + Lx LINE L1 5471 6654 0 5 690 423 0 0 0 chr15 13869330 13869377 -89625597 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 690 811 307 169 67 chr15 13869462 13870274 -89624700 - MTC-int LTR MaLR -263 995 1 5 690 286 197 182 13 chr15 13870300 13870377 -89624597 - MTD LTR MaLR -68 351 262 5 690 439 302 7 21 chr15 13871270 13871412 -89623562 - B1_Mur1 SINE Alu 0 149 10 5 690 312 125 0 0 chr15 13871489 13871545 -89623429 - Lx3_Mus LINE L1 0 7009 6954 5 690 228 115 0 71 chr15 13871545 13871601 -89623373 - Lx3_Mus LINE L1 -1050 5959 5908 5 690 750 154 0 0 chr15 13871601 13871731 -89623243 + CT-rich Low_complexity Low_complexity 4 133 0 5 690 23433 120 25 12 chr15 13871732 13876100 -89618874 - L1MA6 LINE L1 -279 6021 1704 5 690 30280 82 67 4 chr15 13876100 13881767 -89613207 - L1Md_F2 LINE L1 -12 6570 222 5 690 24 67 0 0 chr15 13881895 13881940 -89613034 + AT_rich Low_complexity Low_complexity 1 45 0 5 690 866 104 104 0 chr15 13883388 13883522 -89611452 - B1_Mus1 SINE Alu 0 148 1 5 690 23 33 0 0 chr15 13883572 13883602 -89611372 + AT_rich Low_complexity Low_complexity 1 30 0 5 690 25 31 0 0 chr15 13884075 13884107 -89610867 + AT_rich Low_complexity Low_complexity 1 32 0 5 690 2889 94 70 16 chr15 13884107 13884549 -89610425 - Lx3_Mus LINE L1 -8 7001 6536 5 690 221 314 29 10 chr15 13885239 13885342 -89609632 - L2a LINE L2 -4 3422 3318 5 690 256 397 33 16 chr15 13885372 13885554 -89609420 - L2a LINE L2 -458 2961 2777 5 690 237 277 54 0 chr15 13885933 13886045 -89608929 + L1MA6 LINE L1 6123 6240 -60 5 690 189 74 0 0 chr15 13886098 13886125 -89608849 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 690 436 344 47 52 chr15 13886125 13886318 -89608656 + B3A SINE B2 7 198 0 5 690 1043 86 0 7 chr15 13888045 13888198 -89606776 + (TTCC)n Simple_repeat Simple_repeat 3 154 0 5 690 364 292 27 13 chr15 13888202 13888351 -89606623 - L1MA4 LINE L1 -421 5879 5729 5 690 321 26 0 0 chr15 13889460 13889498 -89605476 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 690 218 313 35 24 chr15 13889678 13889763 -89605211 - RSINE1 SINE B4 -76 89 4 5 690 756 267 68 138 chr15 13891005 13891405 -89603569 - ORR1D1 LTR MaLR 0 374 3 5 690 286 271 56 0 chr15 13891519 13891626 -89603348 - L1M2 LINE L1 -1145 4995 4883 5 690 29 28 0 0 chr15 13891650 13891686 -89603288 + AT_rich Low_complexity Low_complexity 1 36 0 5 690 785 119 0 0 chr15 13891745 13891871 -89603103 - L1Md_F2 LINE L1 -12 6570 6445 5 690 2885 65 0 0 chr15 13891871 13892226 -89602748 + L1_Mus1 LINE L1 6092 6446 -121 5 690 391 284 72 68 chr15 13892239 13892639 -89602335 - L1M2 LINE L1 -1288 4855 4454 5 690 376 330 136 10 chr15 13892650 13893054 -89601920 + L1MA6 LINE L1 5825 6279 -21 5 690 843 243 0 16 chr15 13893121 13893313 -89601661 - Lx9 LINE L1 -379 7265 7077 5 691 194 0 39 0 chr15 13893982 13894008 -89600966 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 691 553 303 146 5 chr15 13894183 13894395 -89600579 + Lx9 LINE L1 6582 6823 -821 5 691 822 312 114 36 chr15 13894415 13895018 -89599956 + Lx9 LINE L1 6876 7525 -119 5 691 425 183 42 93 chr15 13895019 13895212 -89599762 + Lx9 LINE L1 7458 7640 -4 5 691 182 289 116 62 chr15 13897369 13897498 -89597476 - MIR SINE MIR -48 214 79 5 691 678 85 0 0 chr15 13897506 13897600 -89597374 + (TG)n Simple_repeat Simple_repeat 2 95 0 5 691 23 78 0 0 chr15 13898108 13898159 -89596815 + AT_rich Low_complexity Low_complexity 1 51 0 5 691 278 344 97 0 chr15 13898275 13898368 -89596606 + PB1D10 SINE Alu 7 108 -9 5 691 692 80 10 0 chr15 13899405 13899505 -89595469 + (TCTA)n Simple_repeat Simple_repeat 2 102 0 5 691 24 0 0 0 chr15 13900057 13900081 -89594893 + AT_rich Low_complexity Low_complexity 1 24 0 5 691 424 290 103 7 chr15 13900399 13900646 -89594328 - ORR1D1 LTR MaLR -5 369 4 5 691 30 69 0 0 chr15 13902605 13902663 -89592311 + AT_rich Low_complexity Low_complexity 1 58 0 5 691 627 288 6 24 chr15 13902924 13903091 -89591883 - B3A SINE B2 -18 180 17 5 691 201 39 0 0 chr15 13904365 13904391 -89590583 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 691 3860 93 12 34 chr15 13904405 13904995 -89589979 - L1_Mus4 LINE L1 -4 6632 6056 5 691 22 35 0 0 chr15 13905909 13905938 -89589036 + AT_rich Low_complexity Low_complexity 1 29 0 5 691 213 167 56 0 chr15 13906091 13906163 -89588811 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 5 691 1209 41 0 0 chr15 13906476 13906622 -89588352 - B1_Mus2 SINE Alu 0 147 2 5 691 669 309 51 5 chr15 13907024 13907219 -89587755 + B3 SINE B2 13 216 0 5 691 266 156 16 0 chr15 13908262 13908326 -89586648 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 691 477 0 0 0 chr15 13908328 13908381 -89586593 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 5 691 809 192 0 0 chr15 13908761 13908907 -89586067 + B1_Mus1 SINE Alu 2 147 -1 5 691 392 379 0 58 chr15 13908928 13909099 -89585875 + RSINE1 SINE B4 5 165 0 5 691 185 65 32 0 chr15 13909112 13909143 -89585831 + (CATA)n Simple_repeat Simple_repeat 4 35 0 5 691 636 304 100 28 chr15 13909567 13909966 -89585008 - Lx8 LINE L1 -471 7002 6575 5 691 409 302 88 6 chr15 13910007 13910177 -89584797 - Lx9 LINE L1 -1720 5924 5741 5 691 879 322 73 57 chr15 13910174 13910986 -89583988 - Lx9 LINE L1 -18 5829 5005 5 691 225 263 55 71 chr15 13914135 13914262 -89580712 + LTR45C LTR ERV1 374 498 -41 5 691 336 280 9 9 chr15 13914399 13914507 -89580467 + (TG)n Simple_repeat Simple_repeat 1 108 0 5 691 319 372 76 53 chr15 13914596 13914897 -89580077 - MLT1H LTR MaLR -137 412 105 5 691 756 208 84 0 chr15 13915274 13915452 -89579522 - Lx9 LINE L1 -658 6986 6794 5 691 342 0 0 0 chr15 13915569 13915607 -89579367 + (CAAAAA)n Simple_repeat Simple_repeat 3 40 0 5 691 24 0 0 0 chr15 13915741 13915765 -89579209 + AT_rich Low_complexity Low_complexity 1 24 0 5 691 372 329 55 63 chr15 13916006 13916243 -89578731 - L1MEg LINE L1 -5336 748 514 5 691 3168 51 8 10 chr15 13916861 13917258 -89577716 + MTA_Mm LTR MaLR 1 396 0 5 691 239 236 0 11 chr15 13917817 13917911 -89577063 + (TG)n Simple_repeat Simple_repeat 2 94 0 5 691 264 317 47 53 chr15 13918178 13918328 -89576646 - B4A SINE B4 -139 153 5 5 691 405 0 0 0 chr15 13920297 13920342 -89574632 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 691 7694 50 2 2 chr15 13920478 13921430 -89573544 + L1Md_F2 LINE L1 5619 6570 -12 5 691 843 82 15 7 chr15 13921575 13921710 -89573264 + (TTCC)n Simple_repeat Simple_repeat 1 136 0 5 691 33 43 0 0 chr15 13921831 13921878 -89573096 + AT_rich Low_complexity Low_complexity 1 47 0 5 691 304 217 0 14 chr15 13921898 13921968 -89573006 + L1M3 LINE L1 5581 5649 -522 5 691 29 28 0 0 chr15 13921989 13922025 -89572949 + AT_rich Low_complexity Low_complexity 1 36 0 5 691 455 240 93 74 chr15 13923859 13924021 -89570953 - RMER1C Other Other -324 1018 854 5 691 939 82 0 0 chr15 13924033 13924180 -89570794 + (TC)n Simple_repeat Simple_repeat 2 148 0 5 691 366 217 101 28 chr15 13924182 13924291 -89570683 + RMER1C Other Other 1093 1209 -133 5 691 225 0 0 0 chr15 13925270 13925295 -89569679 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 691 26 50 0 0 chr15 13926897 13926937 -89568037 + AT_rich Low_complexity Low_complexity 1 40 0 5 691 439 272 0 16 chr15 13928526 13928653 -89566321 - Lx6 LINE L1 -1399 6061 5937 5 691 2296 211 40 0 chr15 13928669 13929190 -89565784 - Lx6 LINE L1 -662 5218 4677 5 691 433 68 13 13 chr15 13929198 13929273 -89565701 + (TTTG)n Simple_repeat Simple_repeat 2 76 0 5 691 1046 83 0 0 chr15 13929273 13929405 -89565569 - B1_Mm SINE Alu -11 136 5 5 691 874 270 44 0 chr15 13929439 13929691 -89565283 - Lx6 LINE L1 -5 7455 7193 5 691 1747 205 10 33 chr15 13929692 13930091 -89564883 - Lx6 LINE L1 -1215 4665 4276 5 691 25 0 0 0 chr15 13930491 13930516 -89564458 + AT_rich Low_complexity Low_complexity 1 25 0 5 691 474 261 7 7 chr15 13930714 13930849 -89564125 - Lx9 LINE L1 -171 7473 7339 5 691 191 88 0 29 chr15 13931136 13931171 -89563803 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 691 377 20 20 0 chr15 13933496 13933546 -89561428 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 691 343 152 12 12 chr15 13933612 13933692 -89561282 + GA-rich Low_complexity Low_complexity 3 82 0 5 691 5781 100 13 5 chr15 13933702 13934534 -89560440 + L1_Mus4 LINE L1 5798 6636 0 5 691 1395 255 99 18 chr15 13934608 13935112 -89559862 - Lx7 LINE L1 -440 7256 6712 5 691 491 400 31 8 chr15 13935131 13935388 -89559586 + MLT2B1 LTR ERVL 256 518 -2 5 691 251 259 59 0 chr15 13935533 13935668 -89559306 + (CATATA)n Simple_repeat Simple_repeat 6 148 0 5 691 310 197 63 35 chr15 13935604 13935746 -89559228 + (TATAA)n Simple_repeat Simple_repeat 4 149 0 5 691 467 73 15 0 chr15 13936292 13936360 -89558614 + (CAT)n Simple_repeat Simple_repeat 1 69 0 5 691 190 263 34 34 chr15 13936875 13936934 -89558040 + L3 LINE CR1 3349 3407 -1082 6 691 269 364 23 8 chr15 13937057 13937187 -89557787 + L3 LINE CR1 3569 3700 -789 6 691 2539 157 25 11 chr15 13937393 13937838 -89557136 + Lx3A LINE L1 6526 6976 -5 6 691 284 187 0 78 chr15 13938112 13938192 -89556782 + MLT1G LTR MaLR 333 415 -180 6 691 312 341 74 0 chr15 13938706 13938841 -89556133 + BLACKJACK DNA AcHobo 163 307 -2637 6 691 405 333 39 22 chr15 13939931 13940112 -89554862 + Lx8 LINE L1 6991 7174 -299 6 691 205 222 63 0 chr15 13940740 13940803 -89554171 + A-rich Low_complexity Low_complexity 3 69 0 6 691 257 364 10 0 chr15 13940809 13940908 -89554066 + BLACKJACK DNA AcHobo 1488 1587 -1357 6 691 429 220 66 36 chr15 13940926 13941063 -89553911 + L1MCa LINE L1 4 144 -5901 6 691 508 298 52 6 chr15 13941063 13941235 -89553739 - MLT1A0 LTR MaLR 0 365 186 6 691 3696 139 10 20 chr15 13941580 13942180 -89552794 + Lx2 LINE L1 6357 6950 -47 6 691 266 350 24 49 chr15 13942254 13942377 -89552597 - MLT1A0 LTR MaLR -178 187 68 6 691 698 317 129 57 chr15 13942843 13943569 -89551405 + L1MCa LINE L1 1338 2116 -4635 6 691 588 352 94 28 chr15 13943974 13944369 -89550605 + MLT2B4 LTR ERVL 82 502 -54 6 691 504 370 20 18 chr15 13944631 13945051 -89549923 - Lx9 LINE L1 -213 7431 6886 6 691 543 339 50 28 chr15 13945054 13945336 -89549638 + Tigger5 DNA MER2_type 26 313 -2093 6 691 359 291 10 10 chr15 13945438 13945542 -89549432 - RMER10B LTR ERVL -26 372 269 6 691 23 54 0 0 chr15 13945860 13945897 -89549077 + AT_rich Low_complexity Low_complexity 1 37 0 6 691 3306 167 100 9 chr15 13946056 13946420 -89548554 + RMER6A LTR ERVK 1 376 -380 6 691 549 0 0 0 chr15 13946420 13946481 -89548493 + (GA)n Simple_repeat Simple_repeat 1 61 0 6 691 3306 167 100 9 chr15 13946481 13946809 -89548165 + RMER6A LTR ERVK 377 755 -1 6 691 679 335 66 18 chr15 13946830 13947393 -89547581 + L1MCa LINE L1 2760 3349 -3215 6 691 616 350 56 27 chr15 13947481 13947819 -89547155 + Lx8 LINE L1 7070 7417 -56 6 691 3586 158 60 8 chr15 13947946 13948053 -89546921 - Lx LINE L1 -2 6652 6536 6 691 183 80 0 0 chr15 13948053 13948078 -89546896 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 6 691 3586 158 60 8 chr15 13948078 13948608 -89546366 - Lx LINE L1 -119 6535 5984 6 691 248 233 127 28 chr15 13948616 13948828 -89546146 + L1MCa LINE L1 3355 3587 -2977 6 691 622 301 141 14 chr15 13949108 13949391 -89545583 - Lx8 LINE L1 -3 7470 7152 6 691 447 265 53 29 chr15 13949390 13949635 -89545339 + L1MCa LINE L1 3859 4109 -2455 6 691 1185 68 0 0 chr15 13949634 13949782 -89545192 + L1Md_F2 LINE L1 5438 5585 -298 6 691 7312 77 9 12 chr15 13949783 13950770 -89544204 + L1Md_F2 LINE L1 5587 6570 -12 6 691 252 0 0 0 chr15 13950851 13950879 -89544095 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 6 691 332 271 74 34 chr15 13950879 13951028 -89543946 + L1M5 LINE L1 3072 3226 -2920 6 691 799 89 122 0 chr15 13951049 13951172 -89543802 + B1_Mus2 SINE Alu 2 139 -8 6 691 509 309 73 38 chr15 13951329 13951904 -89543070 + L1MD LINE L1 3912 4506 -1640 6 691 620 85 34 0 chr15 13952258 13952376 -89542598 + (TCTA)n Simple_repeat Simple_repeat 4 125 0 6 691 562 263 67 5 chr15 13952561 13952756 -89542218 + L1MC3 LINE L1 7336 7542 -243 6 691 3260 98 75 41 chr15 13952974 13953505 -89541469 - L1_Mus3 LINE L1 -6 6632 6084 6 691 2800 69 67 0 chr15 13953505 13953896 -89541078 + L1_Mus3 LINE L1 5698 6114 -524 6 691 515 327 19 29 chr15 13955580 13955785 -89539189 - ORR1D2 LTR MaLR -167 203 1 6 691 218 32 32 0 chr15 13955871 13955902 -89539072 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 6 691 27 29 0 0 chr15 13955937 13955971 -89539003 + AT_rich Low_complexity Low_complexity 1 34 0 6 691 237 302 0 70 chr15 13956219 13956333 -89538641 - L1M2 LINE L1 -533 5767 5662 6 691 29183 119 12 9 chr15 13956380 13962270 -89532704 - L1_Mus3 LINE L1 -6 6632 673 6 691 183 100 0 0 chr15 13962495 13962525 -89532449 + (TAG)n Simple_repeat Simple_repeat 1 30 0 6 691 379 175 38 19 chr15 13962529 13962634 -89532340 - Lx3C LINE L1 -3 6973 6867 6 691 695 246 172 3 chr15 13962774 13963100 -89531874 - L1M2 LINE L1 -912 5231 4851 6 691 1428 304 46 93 chr15 13963167 13963933 -89531041 - Lx6 LINE L1 -26 7434 6705 6 691 486 88 0 0 chr15 13964240 13964308 -89530666 + (TTTC)n Simple_repeat Simple_repeat 3 70 0 6 691 565 310 75 28 chr15 13964734 13965162 -89529812 - L1MC3 LINE L1 -159 7626 7179 6 691 507 364 83 26 chr15 13965354 13965619 -89529355 - B4A SINE B4 -7 285 6 6 691 262 268 40 76 chr15 13965631 13965829 -89529145 - L1MC3 LINE L1 -744 7041 6851 6 691 3181 255 17 12 chr15 13965905 13966718 -89528256 + Lx7 LINE L1 6533 7349 -347 6 691 212 149 0 21 chr15 13966722 13966770 -89528204 + (TTA)n Simple_repeat Simple_repeat 2 48 0 6 691 198 209 0 0 chr15 13966894 13966937 -89528037 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 691 22 0 0 0 chr15 13966980 13967002 -89527972 + AT_rich Low_complexity Low_complexity 1 22 0 6 691 4859 95 10 1 chr15 13967012 13967694 -89527280 - L1Md_F2 LINE L1 -10 6572 5885 6 691 12488 72 2 0 chr15 13967694 13969327 -89525647 + L1Md_F2 LINE L1 4248 5883 0 6 691 321 246 96 37 chr15 13969348 13969483 -89525491 + Lx7 LINE L1 7554 7696 0 6 691 333 113 0 0 chr15 13969569 13969631 -89525343 + Lx2 LINE L1 6936 6997 0 6 691 1231 74 11 0 chr15 13969651 13969827 -89525147 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 6 691 324 0 0 0 chr15 13969827 13969863 -89525111 + (GAAA)n Simple_repeat Simple_repeat 1 36 0 6 691 25 51 0 0 chr15 13972110 13972149 -89522825 + AT_rich Low_complexity Low_complexity 1 39 0 6 691 233 254 0 0 chr15 13972609 13972676 -89522298 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 691 21 71 0 0 chr15 13974201 13974243 -89520731 + AT_rich Low_complexity Low_complexity 1 42 0 6 691 708 349 83 12 chr15 13974791 13975162 -89519812 + Lx8 LINE L1 6478 7012 -632 6 691 504 333 82 12 chr15 13975188 13975431 -89519543 + Lx8 LINE L1 6935 7194 -279 6 691 1522 163 75 16 chr15 13975765 13976071 -89518903 - RMER6C LTR ERVK 0 690 367 6 691 513 80 0 0 chr15 13976105 13976180 -89518794 + (TC)n Simple_repeat Simple_repeat 2 76 0 6 691 483 18 0 0 chr15 13976180 13976236 -89518738 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 691 523 236 101 15 chr15 13976237 13976435 -89518539 - RMER6C LTR ERVK -230 460 246 6 691 403 213 89 36 chr15 13976440 13976552 -89518422 - RMER6C LTR ERVK -572 118 1 6 691 672 201 100 74 chr15 13976552 13976783 -89518191 - Lx7 LINE L1 -1800 5896 5660 6 691 1097 249 15 6 chr15 13976793 13977121 -89517853 - Lx7 LINE L1 -965 4915 4585 6 691 404 324 86 52 chr15 13977143 13977314 -89517660 + MTD LTR MaLR 105 286 -133 6 691 7006 31 9 4 chr15 13977314 13978132 -89516842 - RLTR13B2 LTR ERVK 0 822 1 6 691 404 324 86 52 chr15 13978132 13978250 -89516724 + MTD LTR MaLR 287 404 -15 6 691 461 282 41 65 chr15 13978414 13978706 -89516268 + BGLII_B LTR ERVK 122 406 -35 6 691 2863 95 30 17 chr15 13978962 13979423 -89515551 + MusHAL1 LINE L1 730 1196 -1516 6 691 245 352 98 30 chr15 13979438 13979602 -89515372 + MLT2C1 LTR ERVL 126 300 -97 6 691 510 272 80 80 chr15 13979774 13979998 -89514976 + MER2 DNA MER2_type 98 321 -24 6 691 315 0 0 0 chr15 13980003 13980038 -89514936 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 691 451 302 0 0 chr15 13980047 13980173 -89514801 + Lx8 LINE L1 6452 6577 -896 6 691 33 109 0 0 chr15 13980943 13981081 -89513893 + AT_rich Low_complexity Low_complexity 1 138 0 6 691 289 198 9 94 chr15 13983601 13983707 -89511267 + T-rich Low_complexity Low_complexity 3 99 0 6 691 36 40 0 0 chr15 13983842 13983892 -89511082 + AT_rich Low_complexity Low_complexity 1 50 0 6 691 232 299 113 57 chr15 13984231 13984408 -89510566 - MLT1H-int LTR MaLR -174 1315 1129 6 691 1927 149 36 11 chr15 13984555 13985005 -89509969 - MT2B2 LTR ERVL 0 584 1 6 691 274 363 92 31 chr15 13985061 13985257 -89509717 - MLT1H-int LTR MaLR -642 767 560 6 691 699 301 44 25 chr15 13985389 13985593 -89509381 - B3 SINE B2 0 216 9 6 691 21 0 0 0 chr15 13985942 13985963 -89509011 + AT_rich Low_complexity Low_complexity 1 21 0 6 691 342 368 61 38 chr15 13986523 13986786 -89508188 + B4A SINE B4 12 280 -12 6 691 34 24 0 0 chr15 13986908 13986949 -89508025 + AT_rich Low_complexity Low_complexity 1 41 0 6 691 1588 193 108 3 chr15 13987364 13987696 -89507278 + ORR1B2 LTR MaLR 1 367 0 6 691 374 198 51 17 chr15 13987885 13988003 -89506971 + Lx9 LINE L1 7522 7643 -1 6 691 314 310 90 21 chr15 13988070 13988215 -89506759 + L1M5 LINE L1 3028 3182 -2964 6 691 233 285 95 24 chr15 13988223 13988349 -89506625 + L1MEg LINE L1 7 141 -6648 6 691 210 143 0 0 chr15 13990307 13990342 -89504632 + (TA)n Simple_repeat Simple_repeat 1 35 0 6 691 611 293 156 22 chr15 13990457 13990815 -89504159 - Lx2B LINE L1 0 7000 6688 6 691 4245 207 40 22 chr15 13990797 13991768 -89503206 + Lx2B LINE L1 5591 6579 -421 6 691 630 104 0 0 chr15 13991768 13991874 -89503100 + L1Md_F3 LINE L1 6479 6584 0 6 691 369 289 162 60 chr15 13992486 13992877 -89502097 + L1MEg LINE L1 1831 2379 -4505 6 691 234 355 15 82 chr15 13993434 13993630 -89501344 + L1M2 LINE L1 5569 5751 -540 6 691 500 170 5 43 chr15 13993636 13993820 -89501154 + (TA)n Simple_repeat Simple_repeat 1 177 0 6 691 234 300 30 23 chr15 13993820 13993953 -89501021 + L1M2 LINE L1 5782 5915 -388 6 691 549 325 66 2 chr15 13994431 13994838 -89500136 + L1MEg LINE L1 3894 4326 -2459 6 691 384 326 27 36 chr15 13994833 13995122 -89499852 + L1MEg LINE L1 6125 6415 -395 6 691 384 40 0 0 chr15 13995232 13995282 -89499692 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 691 231 391 75 38 chr15 13995797 13996036 -89498938 + MLT1G LTR MaLR 71 318 -273 6 691 1358 213 43 117 chr15 13996453 13996761 -89498213 - ORR1D1 LTR MaLR -2 372 81 6 691 3025 12 6 3 chr15 13996761 13997106 -89497868 - ORR1A0 LTR MaLR 0 346 1 6 691 13721 60 11 1 chr15 13997106 13998879 -89496095 - ORR1A0-int LTR MaLR 0 1792 1 6 691 3061 23 0 0 chr15 13998879 13999225 -89495749 - ORR1A0 LTR MaLR 0 346 1 6 691 1358 213 43 117 chr15 13999225 13999307 -89495667 - ORR1D1 LTR MaLR -294 80 11 6 691 23 0 0 0 chr15 14000550 14000573 -89494401 + AT_rich Low_complexity Low_complexity 1 23 0 1 691 317 299 11 22 chr15 14001362 14001451 -89493523 + B3A SINE B2 2 89 -109 2 691 363 23 0 0 chr15 14001496 14001540 -89493434 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 691 351 169 0 0 chr15 14001835 14001906 -89493068 + (TA)n Simple_repeat Simple_repeat 1 71 0 4 691 1331 261 83 5 chr15 14001906 14002280 -89492694 + MTD LTR MaLR 17 419 0 5 691 2969 76 26 26 chr15 14002301 14002731 -89492243 - L1Md_F2 LINE L1 0 6582 6153 6 691 684 334 43 43 chr15 14004977 14005299 -89489675 + MER44B DNA MER2_type 11 332 -218 7 691 351 324 97 43 chr15 14005518 14005980 -89488994 - L1MC1 LINE L1 -380 5953 5467 8 691 396 0 0 0 chr15 14006703 14006747 -89488227 + (CA)n Simple_repeat Simple_repeat 1 44 0 9 691 2216 329 80 24 chr15 14008410 14009529 -89485445 + Lx8 LINE L1 6292 7473 0 1 691 35 24 0 0 chr15 14009617 14009659 -89485315 + AT_rich Low_complexity Low_complexity 1 42 0 1 691 1820 189 95 0 chr15 14009891 14010250 -89484724 - MTC LTR MaLR 0 421 29 1 691 22 94 0 0 chr15 14010937 14011001 -89483973 + AT_rich Low_complexity Low_complexity 1 64 0 1 691 294 164 0 0 chr15 14011568 14011623 -89483351 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 691 22 56 0 0 chr15 14011663 14011699 -89483275 + AT_rich Low_complexity Low_complexity 1 36 0 1 691 505 314 34 5 chr15 14012126 14012334 -89482640 - B3 SINE B2 0 216 3 1 691 267 79 0 0 chr15 14013519 14013557 -89481417 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 691 233 269 99 63 chr15 14013851 14013962 -89481012 + Charlie6 DNA MER1_type 2107 2221 -1279 1 691 198 167 0 0 chr15 14014608 14014644 -89480330 + T-rich Low_complexity Low_complexity 1 36 0 1 691 1177 55 0 14 chr15 14014706 14014854 -89480120 + B1_Mus2 SINE Alu 2 147 0 2 691 410 306 83 59 chr15 14014860 14015148 -89479826 - L1MD LINE L1 -3456 2690 2396 2 691 5523 28 5 0 chr15 14015336 14015983 -89478991 - L1Md_F3 LINE L1 -1 6583 5934 2 691 2211 11 114 0 chr15 14016333 14016595 -89478379 + RLTR10B LTR ERVK 1 292 0 2 691 297 312 61 24 chr15 14016794 14017007 -89477967 - ID_B1 SINE B4 -1 223 3 2 691 22 56 0 0 chr15 14017236 14017272 -89477702 + AT_rich Low_complexity Low_complexity 1 36 0 2 691 330 67 0 0 chr15 14017425 14017470 -89477504 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 691 2104 178 48 5 chr15 14017500 14017900 -89477074 - MTC LTR MaLR -2 419 3 2 691 256 314 71 0 chr15 14017912 14017982 -89476992 - RSINE1 SINE B4 -34 131 57 2 691 28 48 0 0 chr15 14018825 14018867 -89476107 + AT_rich Low_complexity Low_complexity 1 42 0 2 691 201 176 26 51 chr15 14019013 14019091 -89475883 + (TTATA)n Simple_repeat Simple_repeat 2 77 0 3 691 623 273 193 32 chr15 14019689 14019969 -89475005 - MTC LTR MaLR -52 369 45 3 691 718 89 9 9 chr15 14019997 14020110 -89474864 + (GA)n Simple_repeat Simple_repeat 2 114 0 3 691 456 37 0 0 chr15 14020115 14020169 -89474805 + (GGAA)n Simple_repeat Simple_repeat 3 56 0 3 691 802 54 9 0 chr15 14020170 14020282 -89474692 - MusHAL1 LINE L1 -726 1986 1874 3 691 5294 96 2 9 chr15 14020276 14021084 -89473890 - MusHAL1 LINE L1 -1530 1182 380 3 691 300 0 0 0 chr15 14021196 14021229 -89473745 - Lx LINE L1 -957 5697 5665 3 691 2884 123 5 2 chr15 14021228 14021653 -89473321 + L1_Mus3 LINE L1 6188 6613 -25 3 691 27 0 0 0 chr15 14021656 14021683 -89473291 + AT_rich Low_complexity Low_complexity 1 27 0 3 691 468 238 37 104 chr15 14022343 14022389 -89472585 + L1_Mur3 LINE L1 2665 2710 -3170 3 691 2683 70 3 3 chr15 14022389 14022735 -89472239 - ORR1A1 LTR MaLR 0 346 1 3 691 12746 78 14 11 chr15 14022737 14024522 -89470452 - ORR1A1-int LTR MaLR -2 1790 1 3 86 2613 69 0 60 chr15 14024522 14024890 -89470084 - ORR1A1 LTR MaLR 0 346 1 3 692 468 238 37 104 chr15 14024890 14025107 -89469867 + L1_Mur3 LINE L1 2711 2913 -2967 3 692 2265 248 58 8 chr15 14025112 14025698 -89469276 - Lx6 LINE L1 -343 7117 6503 4 692 1617 114 4 4 chr15 14025709 14025955 -89469019 - L1_Mus1 LINE L1 0 6567 6322 4 692 2025 62 15 8 chr15 14025938 14026198 -89468776 - L1Md_F2 LINE L1 -116 6466 6205 4 692 3257 247 26 35 chr15 14026199 14027152 -89467822 - Lx6 LINE L1 -959 6501 5542 4 692 2784 219 47 3 chr15 14027151 14027787 -89467187 - Lx6 LINE L1 -795 5085 4422 4 692 200 128 26 0 chr15 14027875 14027914 -89467060 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 4 692 2333 238 9 15 chr15 14028026 14028568 -89466406 - Lx2B LINE L1 -7 6993 6455 4 692 1580 229 18 3 chr15 14028568 14028905 -89466069 + MTC LTR MaLR 78 419 -2 4 692 412 328 0 0 chr15 14028907 14029023 -89465951 - B1_Mur2 SINE Alu -16 133 18 4 692 2847 70 0 5 chr15 14029502 14029878 -89465096 - L1Md_F2 LINE L1 -1 6581 6208 4 692 360 0 0 0 chr15 14029921 14029961 -89465013 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 692 464 223 0 30 chr15 14029961 14030094 -89464880 - ORR1C1 LTR MaLR -39 355 236 4 692 322 351 62 16 chr15 14030113 14030307 -89464667 + Lx8 LINE L1 6810 7012 -461 5 692 493 274 102 21 chr15 14030331 14030442 -89464532 + Lx8 LINE L1 7218 7328 -145 5 692 600 14 0 0 chr15 14030442 14030511 -89464463 + (TA)n Simple_repeat Simple_repeat 2 70 0 5 692 493 274 102 21 chr15 14030511 14030634 -89464340 + Lx8 LINE L1 7329 7470 -3 5 692 309 89 0 0 chr15 14030669 14030714 -89464260 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 692 27 29 0 0 chr15 14030915 14030949 -89464025 + AT_rich Low_complexity Low_complexity 1 34 0 5 692 414 0 0 0 chr15 14030958 14031004 -89463970 + (TC)n Simple_repeat Simple_repeat 2 47 0 5 692 342 0 0 0 chr15 14031004 14031041 -89463933 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 692 23 0 0 0 chr15 14031067 14031090 -89463884 + AT_rich Low_complexity Low_complexity 1 23 0 5 692 2046 256 109 15 chr15 14032389 14033023 -89461951 - Lx6 LINE L1 -2 7458 6734 5 692 615 27 0 0 chr15 14033023 14033096 -89461878 + (TCCC)n Simple_repeat Simple_repeat 4 76 0 5 692 2046 258 147 14 chr15 14033096 14033242 -89461732 - Lx6 LINE L1 -727 6733 6542 5 692 513 0 0 0 chr15 14033259 14033316 -89461658 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 5 692 8303 114 70 43 chr15 14033317 14034983 -89459991 - Lx3A LINE L1 -15 6966 5359 6 692 5743 90 14 6 chr15 14034983 14035790 -89459184 - Lx3_Mus LINE L1 0 7009 6197 6 692 5152 94 168 39 chr15 14035790 14036134 -89458840 - Lx3A LINE L1 -528 5358 4881 6 692 1030 83 5 111 chr15 14036133 14036322 -89458652 + Lx3A LINE L1 4718 4886 -1000 6 692 650 271 77 0 chr15 14036376 14036557 -89458417 - Lx6 LINE L1 -913 6547 6353 5 692 354 187 5 51 chr15 14036608 14036717 -89458257 - L1_Rod LINE L1 -2890 3250 3147 6 692 710 88 0 0 chr15 14036727 14036818 -89458156 + L1_Mus1 LINE L1 5795 5885 -682 6 692 535 273 73 24 chr15 14036815 14037145 -89457829 - L1_Rod LINE L1 -2676 3171 2826 6 692 33 56 0 0 chr15 14037166 14037220 -89457754 + AT_rich Low_complexity Low_complexity 1 54 0 6 692 535 231 97 147 chr15 14037354 14037687 -89457287 - L1_Rod LINE L1 -3945 1902 1620 6 692 393 22 0 0 chr15 14037687 14037733 -89457241 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 692 535 231 97 147 chr15 14037733 14037841 -89457133 - L1_Rod LINE L1 -4228 1619 1485 6 692 32500 70 3 4 chr15 14038061 14043276 -89451698 + L1Md_F2 LINE L1 281 5589 -297 6 692 7820 58 6 0 chr15 14043276 14044265 -89450709 + L1Md_F2 LINE L1 5590 6584 -1 6 692 189 74 0 0 chr15 14044309 14044336 -89450638 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 692 257 118 20 0 chr15 14044487 14044538 -89450436 + (CAAAC)n Simple_repeat Simple_repeat 1 52 0 6 692 532 252 0 8 chr15 14045178 14045298 -89449676 - B2_Mm2 SINE B2 -70 125 7 6 692 419 372 50 20 chr15 14045555 14045755 -89449219 - B3A SINE B2 -9 207 2 7 692 200 59 29 0 chr15 14047315 14047349 -89447625 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 7 692 521 330 55 9 chr15 14047799 14048019 -89446955 + Lx8 LINE L1 6870 7099 -374 7 692 2004 154 19 46 chr15 14048124 14048538 -89446436 + RLTR9E LTR ERVK 7 409 0 7 692 876 218 12 111 chr15 14048545 14048870 -89446104 + MMETn-int LTR ERVK 7 299 -4545 7 692 378 176 0 13 chr15 14048860 14048935 -89446039 + RLTR45-int LTR ERVK 2091 2164 -5080 7 692 1708 184 68 16 chr15 14049382 14049808 -89445166 + MMETn-int LTR ERVK 716 1163 -3681 7 692 665 256 5 43 chr15 14049813 14050001 -89444973 + ETnERV2-int LTR ERVK 2428 2608 -4798 7 692 16212 125 26 4 chr15 14050001 14052472 -89442502 + ETnERV2-int LTR ERVK 3055 5580 -1826 7 692 1686 201 44 60 chr15 14052472 14052902 -89442072 - RLTR1D LTR ERV1 0 605 183 7 692 810 252 31 22 chr15 14052902 14053129 -89441845 - RLTR1D LTR ERV1 -359 246 18 7 692 4517 126 37 30 chr15 14053129 14054001 -89440973 + ETnERV2-int LTR ERVK 5592 6227 -1179 7 692 500 110 0 0 chr15 14054212 14054285 -89440689 + ETnERV2-int LTR ERVK 7331 7403 -3 7 692 2053 169 12 36 chr15 14054287 14054705 -89440269 + RLTR9E LTR ERVK 1 408 -1 7 692 294 309 108 72 chr15 14054739 14054934 -89440040 + Lx8 LINE L1 7268 7469 -4 7 692 924 216 17 4 chr15 14055756 14055988 -89438986 + Lx2B LINE L1 6766 7000 0 7 692 2951 260 50 26 chr15 14056026 14056980 -89437994 + RMER1C Other Other 41 1339 -3 7 692 2570 180 96 75 chr15 14057033 14058424 -89436550 + ORR1A3-int LTR MaLR 458 1772 -191 8 692 7004 112 16 9 chr15 14058437 14059471 -89435503 - L1_Mus4 LINE L1 -8 6628 5587 8 692 2533 157 9 0 chr15 14059479 14059911 -89435063 + L1_Mm LINE L1 5097 5532 -351 8 692 206 196 78 10 chr15 14060417 14060492 -89434482 + (TA)n Simple_repeat Simple_repeat 2 81 0 8 692 201 74 0 0 chr15 14060492 14060519 -89434455 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 692 206 196 78 10 chr15 14060519 14060546 -89434428 + (TA)n Simple_repeat Simple_repeat 1 29 0 8 692 526 238 59 11 chr15 14060790 14060956 -89434018 - ORR1D2 LTR MaLR 0 370 210 8 692 378 250 18 36 chr15 14060936 14061048 -89433926 - ORR1D2-int LTR MaLR -158 1212 1103 8 692 2135 120 32 0 chr15 14061521 14061837 -89433137 + ORR1A2 LTR MaLR 2 327 0 8 692 6444 121 17 20 chr15 14061977 14063003 -89431971 - Lx LINE L1 -8 6646 5625 8 692 4981 214 128 45 chr15 14062985 14064381 -89430593 + Lx7 LINE L1 4365 5892 -1804 8 692 419 0 20 0 chr15 14064381 14064432 -89430542 + (TTA)n Simple_repeat Simple_repeat 3 54 0 9 692 4981 258 95 21 chr15 14064432 14065787 -89429187 + Lx7 LINE L1 5893 7350 -346 8 692 270 164 0 18 chr15 14065900 14065956 -89429018 + Lx7 LINE L1 7637 7691 -5 9 692 292 381 45 30 chr15 14065964 14066164 -89428810 + B4A SINE B4 82 284 -8 9 692 318 115 0 0 chr15 14066178 14066230 -89428744 + (TG)n Simple_repeat Simple_repeat 2 53 0 9 692 521 88 12 0 chr15 14066244 14066324 -89428650 + (TA)n Simple_repeat Simple_repeat 1 81 0 9 692 1317 72 22 0 chr15 14066731 14066911 -89428063 + B2_Mm1t SINE B2 2 185 -8 9 692 21 57 0 0 chr15 14069271 14069306 -89425668 + AT_rich Low_complexity Low_complexity 1 35 0 9 692 207 0 0 0 chr15 14070333 14070356 -89424618 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 9 692 21 0 0 0 chr15 14070409 14070430 -89424544 + AT_rich Low_complexity Low_complexity 1 21 0 9 692 30 45 0 0 chr15 14070732 14070776 -89424198 + AT_rich Low_complexity Low_complexity 1 44 0 9 692 24 85 0 0 chr15 14070934 14070993 -89423981 + AT_rich Low_complexity Low_complexity 1 59 0 1 692 23 68 0 0 chr15 14071011 14071055 -89423919 + AT_rich Low_complexity Low_complexity 1 44 0 1 692 2725 126 9 130 chr15 14071168 14071728 -89423246 + Lx3B LINE L1 5687 6178 -803 1 692 2036 135 13 3 chr15 14071728 14072032 -89422942 - RLTR27 LTR ERVK 0 309 3 1 692 1471 164 4 27 chr15 14072039 14072302 -89422672 - MMERVK10C-int LTR ERVK -4 7577 7321 1 692 386 302 19 19 chr15 14072436 14072598 -89422376 - MMERVK10C-int LTR ERVK -512 7069 6908 1 692 1155 262 32 39 chr15 14073091 14073524 -89421450 - MMERVK10C-int LTR ERVK -2099 5482 5053 1 692 1834 302 29 52 chr15 14073524 14074705 -89420269 - MMERVK10C-int LTR ERVK -5271 2310 673 1 692 694 238 46 41 chr15 14075062 14075259 -89419715 - RLTR10-int LTR ERVK -1135 852 655 1 692 402 29 7 0 chr15 14075291 14075344 -89419630 - RLTR10-int LTR ERVK -7314 267 163 1 692 2017 138 6 22 chr15 14075369 14075680 -89419294 - RLTR27 LTR ERVK 0 309 4 1 692 3450 178 92 7 chr15 14075680 14076398 -89418576 + Lx3B LINE L1 6166 6944 -29 1 692 25 0 0 0 chr15 14076401 14076426 -89418548 + AT_rich Low_complexity Low_complexity 1 25 0 1 692 30 69 0 0 chr15 14076824 14076882 -89418092 + AT_rich Low_complexity Low_complexity 1 58 0 1 692 2266 307 65 39 chr15 14077000 14077777 -89417197 + RMER1C Other Other 445 1204 -138 1 692 207 0 0 0 chr15 14077777 14077800 -89417174 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 692 2266 305 66 39 chr15 14077800 14077917 -89417057 + RMER1C Other Other 1205 1335 -7 1 692 270 0 0 0 chr15 14077922 14077952 -89417022 + (GA)n Simple_repeat Simple_repeat 1 30 0 1 692 265 215 35 4 chr15 14078138 14078203 -89416771 + MTE2a LTR MaLR 283 347 -32 1 692 386 247 37 74 chr15 14078673 14078835 -89416139 + RMER1C Other Other 902 1057 -285 1 692 26 50 0 0 chr15 14079097 14079137 -89415837 + AT_rich Low_complexity Low_complexity 1 40 0 1 692 1370 300 98 25 chr15 14079395 14079878 -89415096 - Lx9 LINE L1 -208 7436 6902 1 692 1705 144 10 0 chr15 14079878 14080176 -89414798 + Lx LINE L1 6352 6652 -2 1 692 1370 300 98 25 chr15 14080176 14080368 -89414606 - Lx9 LINE L1 -743 6901 6712 1 692 1054 0 16 0 chr15 14080371 14080497 -89414477 + (GAA)n Simple_repeat Simple_repeat 1 128 0 1 692 2011 214 32 36 chr15 14080526 14080990 -89413984 + L1_Rod LINE L1 5265 5728 -119 1 692 2834 66 39 3 chr15 14080990 14081372 -89413602 + MTA_Mm LTR MaLR 1 396 0 1 692 2011 214 32 36 chr15 14081372 14081440 -89413534 + L1_Rod LINE L1 5729 5795 -52 1 692 6250 165 21 2 chr15 14081488 14082618 -89412356 - Lx3A LINE L1 -5 6976 5825 1 692 3947 112 13 47 chr15 14082618 14083385 -89411589 + Lx3B LINE L1 5258 5995 -978 1 692 1909 237 41 7 chr15 14083413 14083825 -89411149 - RLTR25B LTR ERVK -602 426 1 1 692 1830 341 46 18 chr15 14083993 14084881 -89410093 + Lx8 LINE L1 6209 7121 -352 1 692 2818 89 13 0 chr15 14085056 14085449 -89409525 - MTB LTR MaLR -2 398 1 1 692 1368 274 12 72 chr15 14085808 14086335 -89408639 + RMER19C LTR ERVK 1 761 -141 1 692 1981 120 6 65 chr15 14086362 14086701 -89408273 + ORR1A2 LTR MaLR 1 319 -8 1 692 284 192 0 0 chr15 14086705 14086757 -89408217 + RLTR15 LTR ERVK 174 225 -134 1 692 24 32 0 0 chr15 14086988 14087019 -89407955 + AT_rich Low_complexity Low_complexity 1 31 0 1 692 629 187 14 43 chr15 14087200 14087313 -89407661 + RLTR15 LTR ERVK 218 331 -28 1 692 284 70 23 0 chr15 14087313 14087356 -89407618 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 1 692 629 187 14 43 chr15 14087356 14087382 -89407592 + RLTR15 LTR ERVK 332 352 -7 1 692 21 0 0 0 chr15 14088572 14088593 -89406381 + AT_rich Low_complexity Low_complexity 1 21 0 1 692 903 229 37 0 chr15 14088853 14089071 -89405903 - URR1A DNA MER1_type 0 226 1 1 692 6571 54 11 0 chr15 14089920 14090719 -89404255 + RLTR13C2 LTR ERVK 1 808 0 1 692 223 178 0 0 chr15 14091801 14091846 -89403128 + T-rich Low_complexity Low_complexity 1 45 0 1 692 2948 214 5 11 chr15 14092592 14092699 -89402275 - RLTR20B2 LTR ERVK 0 560 454 1 692 669 56 0 0 chr15 14092699 14092789 -89402185 + (CA)n Simple_repeat Simple_repeat 1 90 0 1 692 2948 214 5 11 chr15 14092789 14093244 -89401730 - RLTR20B2 LTR ERVK -107 453 1 1 692 2014 160 61 3 chr15 14094315 14094678 -89400296 - Lx4A LINE L1 -3 7055 6672 1 692 337 315 5 42 chr15 14095613 14095805 -89399169 - Lx7 LINE L1 0 7696 7512 1 692 425 279 76 9 chr15 14096289 14096490 -89398484 + L1M3 LINE L1 4774 4991 -1152 1 692 595 101 0 0 chr15 14096523 14096602 -89398372 - L1_Mus4 LINE L1 -275 6361 6283 1 692 1794 101 44 24 chr15 14096602 14096895 -89398079 + Lx LINE L1 6348 6646 -8 1 692 248 314 58 14 chr15 14096937 14097076 -89397898 + L1M3 LINE L1 5034 5178 -962 1 692 721 311 69 26 chr15 14097124 14097428 -89397546 + Lx6 LINE L1 7119 7435 -25 1 692 10122 40 2 1 chr15 14098870 14101561 -89393413 + L1Md_Gf LINE L1 1 2276 -3610 1 692 8468 9 0 0 chr15 14101561 14102509 -89392465 + L1Md_T LINE L1 5634 6581 -1 1 692 37 23 0 0 chr15 14102719 14102763 -89392211 + AT_rich Low_complexity Low_complexity 1 44 0 1 692 3649 174 30 38 chr15 14102767 14103752 -89391222 - Lx3A LINE L1 -19 6962 6008 1 692 477 0 0 0 chr15 14103823 14103876 -89391098 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 692 471 363 18 6 chr15 14103876 14104045 -89390929 - MTEa LTR MaLR -50 329 159 1 692 432 0 0 0 chr15 14104046 14104094 -89390880 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 1 692 360 0 0 0 chr15 14104134 14104174 -89390800 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 692 279 229 0 0 chr15 14104174 14104244 -89390730 - Lx9 LINE L1 -166 7478 7409 1 692 1466 350 70 20 chr15 14104242 14105393 -89389581 - Lx8 LINE L1 -133 7340 6133 1 692 1313 237 0 0 chr15 14105405 14105679 -89389295 + Lx5 LINE L1 6243 6516 -534 1 692 928 124 24 0 chr15 14106165 14106228 -89388746 + (TTCTCC)n Simple_repeat Simple_repeat 4 66 0 1 692 1329 73 0 0 chr15 14106228 14106406 -89388568 + (TTC)n Simple_repeat Simple_repeat 2 179 0 1 692 928 124 24 0 chr15 14106406 14106511 -89388463 + (TTCTCC)n Simple_repeat Simple_repeat 3 111 0 1 692 1192 55 0 0 chr15 14106941 14107086 -89387888 - B1_Mm SINE Alu -1 146 2 1 692 423 0 0 0 chr15 14107606 14107653 -89387321 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 692 1188 122 27 0 chr15 14107782 14107970 -89387004 + B2_Mm2 SINE B2 2 194 -1 1 692 224 59 29 0 chr15 14108299 14108333 -89386641 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 692 426 53 0 0 chr15 14108398 14108455 -89386519 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 692 33 25 0 0 chr15 14109971 14110011 -89384963 + AT_rich Low_complexity Low_complexity 1 40 0 1 692 5412 126 38 18 chr15 14110013 14110916 -89384058 - Lx3A LINE L1 -8 6973 6053 1 692 1239 111 0 0 chr15 14110942 14111114 -89383860 - B2_Mm2 SINE B2 -22 173 2 1 692 445 71 0 0 chr15 14111115 14111171 -89383803 - Lx3A LINE L1 -953 6020 5965 1 692 843 100 0 0 chr15 14111170 14111290 -89383684 + L1_Mur1 LINE L1 4398 4517 -1369 1 692 3707 122 35 0 chr15 14111294 14111860 -89383114 + L1_Mur1 LINE L1 5217 5802 -84 1 692 405 239 7 124 chr15 14111860 14111903 -89383071 + MT2B LTR ERVL 130 154 -447 1 692 1032 84 7 0 chr15 14111903 14112045 -89382929 + B1_Mus2 SINE Alu 2 144 -3 1 692 305 0 50 0 chr15 14112045 14112085 -89382889 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 1 692 1122 99 0 0 chr15 14112085 14112246 -89382728 + (GGAGA)n Simple_repeat Simple_repeat 5 166 0 1 692 790 80 64 0 chr15 14112248 14112373 -89382601 + Lx3C LINE L1 5827 5959 -1017 1 692 2672 185 37 94 chr15 14112480 14112841 -89382133 - Lx5 LINE L1 -699 6351 6029 1 692 2031 104 7 0 chr15 14112841 14113130 -89381844 - L1_Mus3 LINE L1 -8 6630 6340 1 692 2672 185 37 94 chr15 14113130 14113437 -89381537 - Lx5 LINE L1 -1022 6028 5721 1 692 3255 215 3 37 chr15 14113430 14114098 -89380876 + Lx5 LINE L1 6348 6992 -58 1 692 251 250 111 12 chr15 14114098 14114179 -89380795 + ID_B1 SINE B4 4 92 -132 1 692 251 251 111 0 chr15 14114179 14114209 -89380765 + ID4_ SINE ID 4 127 -25 1 692 301 327 57 34 chr15 14114518 14114727 -89380247 - Lx8 LINE L1 -1101 6372 6159 1 692 1942 151 21 3 chr15 14114911 14115249 -89379725 + Lx LINE L1 6303 6646 -8 1 692 243 0 0 0 chr15 14115355 14115382 -89379592 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 692 3987 79 18 9 chr15 14115548 14116098 -89378876 - L1Md_F2 LINE L1 0 6582 6028 1 692 1106 152 5 0 chr15 14116473 14116657 -89378317 - B2_Mm2 SINE B2 -9 186 2 1 692 234 208 80 125 chr15 14116778 14116866 -89378108 - Tigger5 DNA MER2_type -1348 1058 975 1 692 1758 274 24 35 chr15 14116866 14117358 -89377616 + Lx6 LINE L1 6970 7456 -4 1 692 6251 216 19 1 chr15 14118149 14119548 -89375426 + L1_Mur2 LINE L1 3724 5147 -730 1 692 210 162 0 0 chr15 14119908 14119945 -89375029 + T-rich Low_complexity Low_complexity 1 37 0 1 692 4062 99 0 0 chr15 14120055 14120641 -89374333 - L1_Mm LINE L1 -2227 3656 3071 1 692 3592 116 9 2 chr15 14120643 14121170 -89373804 - L1_Mus4 LINE L1 -176 6460 5930 1 692 6735 129 12 9 chr15 14121207 14122381 -89372593 - L1_Mus4 LINE L1 0 6636 5459 1 692 5101 159 12 1 chr15 14122381 14123298 -89371676 + L1_Mus4 LINE L1 4524 5450 -433 1 692 32 67 0 0 chr15 14123746 14123806 -89371168 + AT_rich Low_complexity Low_complexity 1 60 0 1 692 373 68 54 53 chr15 14123810 14123868 -89371106 + B1_Mur4 SINE Alu 55 139 -11 1 692 258 32 0 0 chr15 14123868 14123899 -89371075 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 692 373 50 63 48 chr15 14123899 14123912 -89371062 + B1_Mur4 SINE Alu 140 150 0 1 692 513 115 0 0 chr15 14124631 14124718 -89370256 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 692 441 316 107 33 chr15 14124728 14124970 -89370004 - B4A SINE B4 -23 269 10 1 692 192 152 0 0 chr15 14125002 14125035 -89369939 + (TATATG)n Simple_repeat Simple_repeat 3 35 0 1 692 27 49 0 0 chr15 14125050 14125091 -89369883 + AT_rich Low_complexity Low_complexity 1 41 0 1 692 233 344 84 109 chr15 14125880 14126082 -89368892 + B3A SINE B2 2 198 0 1 692 1535 110 22 19 chr15 14126385 14126653 -89368321 + Lx LINE L1 6384 6652 -2 1 692 718 321 79 23 chr15 14127261 14127653 -89367321 + L1MDa LINE L1 32 445 -6188 1 692 2171 102 104 9 chr15 14127820 14128165 -89366809 - L1_Mus4 LINE L1 -8 6628 6251 1 692 443 275 59 53 chr15 14128174 14128343 -89366631 - RMER30 DNA MER1_type -25 177 8 1 692 29 104 0 0 chr15 14128777 14128883 -89366091 + AT_rich Low_complexity Low_complexity 1 106 0 1 692 528 238 0 0 chr15 14128904 14129051 -89365923 + (TAGA)n Simple_repeat Simple_repeat 1 147 0 2 692 307 254 0 0 chr15 14129088 14129147 -89365827 - RSINE1 SINE B4 -95 70 12 2 692 195 339 15 0 chr15 14129341 14129406 -89365568 + MIR SINE MIR 81 146 -62 2 692 3077 36 57 0 chr15 14130189 14130573 -89364401 + L1Md_T LINE L1 6172 6577 -5 2 692 180 77 0 0 chr15 14130576 14130602 -89364372 + (A)n Simple_repeat Simple_repeat 1 26 0 2 692 2891 143 49 6 chr15 14130709 14131407 -89363567 - Lx4B LINE L1 -912 6146 5411 2 692 9917 156 40 62 chr15 14131405 14132002 -89362972 - Lx4B LINE L1 -2423 3454 2839 2 692 2976 62 29 3 chr15 14132002 14132388 -89362586 - MTA_Mm LTR MaLR 0 396 1 2 692 9917 156 40 62 chr15 14132388 14133012 -89361962 - Lx4B LINE L1 -3039 2838 2210 2 692 3764 107 13 2 chr15 14133012 14133566 -89361408 - L1_Mus3 LINE L1 0 6638 6079 2 692 9917 163 40 47 chr15 14133566 14135196 -89359778 - Lx4B LINE L1 -3668 2209 639 2 692 255 332 129 51 chr15 14135325 14135619 -89359355 + MTEb LTR MaLR 41 357 -2 2 692 3177 150 27 4 chr15 14135745 14136261 -89358713 + MT2B LTR ERVL 1 528 -73 2 692 1661 160 49 0 chr15 14136273 14136561 -89358413 - Lx4A LINE L1 -165 6893 6592 2 692 1046 149 0 0 chr15 14136562 14136710 -89358264 + B1_Mus1 SINE Alu 1 148 0 2 692 219 246 0 0 chr15 14136712 14136769 -89358205 + A-rich Low_complexity Low_complexity 1 57 0 2 692 913 137 0 64 chr15 14136770 14136942 -89358032 - Lx4A LINE L1 -451 6607 6447 2 692 2561 218 21 18 chr15 14136933 14137490 -89357484 + Lx4A LINE L1 5912 6470 -588 2 692 339 25 0 0 chr15 14137552 14137592 -89357382 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 692 24 32 0 0 chr15 14138592 14138623 -89356351 + AT_rich Low_complexity Low_complexity 1 31 0 2 692 189 74 0 0 chr15 14139260 14139287 -89355687 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 692 2434 127 35 28 chr15 14139289 14139711 -89355263 + Lx2 LINE L1 6573 6997 0 2 692 580 241 47 101 chr15 14140168 14140464 -89354510 - RMER6C LTR ERVK -116 574 295 2 692 465 34 0 0 chr15 14140490 14140549 -89354425 + (TATG)n Simple_repeat Simple_repeat 2 60 0 2 692 1887 186 5 110 chr15 14140549 14140967 -89354007 - ORR1B1 LTR MaLR -20 374 1 2 692 392 156 0 0 chr15 14140967 14141025 -89353949 - RMER6C LTR ERVK -522 168 111 2 692 2869 178 7 11 chr15 14141267 14141818 -89353156 - Lx2B LINE L1 -522 5355 4807 2 692 7719 173 9 28 chr15 14141799 14142643 -89352331 + Lx2B LINE L1 5360 6201 -799 2 692 3440 20 5 0 chr15 14142643 14143037 -89351937 + MTA_Mm LTR MaLR 1 396 0 2 692 7719 169 11 35 chr15 14143037 14143865 -89351109 + Lx2B LINE L1 6202 6998 -2 2 692 1690 186 44 6 chr15 14143877 14144217 -89350757 - MTC LTR MaLR -66 355 3 2 692 692 144 0 126 chr15 14144219 14144410 -89350564 - MTC-int LTR MaLR 0 1098 932 2 692 770 154 73 0 chr15 14144404 14144540 -89350434 + ORR1A4-int LTR MaLR 923 1068 -895 2 692 2470 154 49 10 chr15 14144537 14145201 -89349773 + ORR1A4-int LTR MaLR 1001 1963 0 2 692 987 194 150 78 chr15 14145201 14145508 -89349466 + ORR1A4 LTR MaLR 1 329 0 2 692 504 0 0 0 chr15 14145554 14145610 -89349364 + (TTTTA)n Simple_repeat Simple_repeat 2 57 0 2 692 1040 93 0 0 chr15 14145614 14145754 -89349220 - B1_Mus1 SINE Alu -8 140 1 2 692 25 31 0 0 chr15 14145758 14145790 -89349184 + AT_rich Low_complexity Low_complexity 1 32 0 2 692 348 24 0 0 chr15 14145793 14145834 -89349140 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 692 207 69 0 0 chr15 14146600 14146629 -89348345 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 692 2786 60 10 2 chr15 14147874 14148243 -89346731 + L1Md_F3 LINE L1 6200 6700 -297 2 692 243 0 0 0 chr15 14148323 14148350 -89346624 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 692 196 277 0 88 chr15 14149232 14149323 -89345651 - L4 LINE RTE -265 1764 1682 2 692 1771 243 19 36 chr15 14149809 14150227 -89344747 - MTC LTR MaLR -8 413 3 2 692 23 0 0 0 chr15 14150361 14150384 -89344590 + AT_rich Low_complexity Low_complexity 1 23 0 2 692 444 19 0 0 chr15 14152070 14152123 -89342851 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 692 6496 57 9 2 chr15 14152599 14153402 -89341572 + RLTR13C2 LTR ERVK 1 808 0 2 692 296 335 160 31 chr15 14153529 14153723 -89341251 + RMER15 LTR ERVL 275 493 -82 2 692 234 91 0 0 chr15 14153905 14153938 -89341036 + (T)n Simple_repeat Simple_repeat 1 33 0 2 692 6550 59 6 8 chr15 14154052 14154892 -89340082 - L1Md_F2 LINE L1 -12 6570 5733 2 692 3849 57 4 0 chr15 14154887 14155365 -89339609 + L1Md_F2 LINE L1 5278 5757 -126 2 693 23 33 0 0 chr15 14157153 14157183 -89337791 + AT_rich Low_complexity Low_complexity 1 30 0 2 693 296 314 30 49 chr15 14157548 14157712 -89337262 - MER58B DNA MER1_type -122 219 59 2 693 21 36 0 0 chr15 14158298 14158326 -89336648 + AT_rich Low_complexity Low_complexity 1 28 0 2 693 309 324 122 48 chr15 14158417 14158605 -89336369 + B3A SINE B2 14 215 -1 2 693 1900 54 0 12 chr15 14158837 14159081 -89335893 + L1_Mus1 LINE L1 6327 6567 0 2 693 210 37 0 0 chr15 14159505 14159532 -89335442 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 693 3334 168 31 3 chr15 14159719 14160127 -89334847 + L1_Mur2 LINE L1 4209 4622 -1255 2 693 425 34 17 0 chr15 14160127 14160186 -89334788 + (CAAAC)n Simple_repeat Simple_repeat 2 61 0 2 693 3334 168 31 3 chr15 14160186 14160422 -89334552 + L1_Mur2 LINE L1 4623 4870 -1007 2 693 3244 46 0 14 chr15 14160421 14160837 -89334137 - L1_Mus1 LINE L1 -571 5996 5587 2 693 4040 81 6 0 chr15 14160845 14161386 -89333588 + L1_Mus1 LINE L1 6024 6567 0 2 693 643 186 8 0 chr15 14161399 14161528 -89333446 + L1_Mur2 LINE L1 4863 4992 -894 2 693 3806 56 2 0 chr15 14161528 14162010 -89332964 + L1Md_F2 LINE L1 6088 6570 -12 2 693 620 328 14 86 chr15 14162127 14162407 -89332567 + B4 SINE B4 10 269 -23 2 693 6254 57 2 4 chr15 14162627 14163433 -89331541 - L1Md_F2 LINE L1 -2 6580 5776 2 693 255 105 0 0 chr15 14163436 14163474 -89331500 + L1_Rod LINE L1 5793 5830 -17 2 693 297 219 0 0 chr15 14163475 14163589 -89331385 + CT-rich Low_complexity Low_complexity 2 115 0 2 693 3329 255 88 78 chr15 14163732 14165135 -89329839 + Lx9 LINE L1 6097 7512 -132 2 693 366 196 0 0 chr15 14165136 14165243 -89329731 + (TA)n Simple_repeat Simple_repeat 2 108 0 2 693 23 54 0 0 chr15 14165304 14165341 -89329633 + AT_rich Low_complexity Low_complexity 1 37 0 2 693 2427 203 4 24 chr15 14165341 14165840 -89329134 - Lx4B LINE L1 0 7058 6570 2 693 4601 186 34 10 chr15 14165840 14167358 -89327616 - Lx4B LINE L1 -640 6418 4864 2 693 278 140 84 21 chr15 14167355 14167450 -89327524 + Lx9 LINE L1 7528 7628 -16 2 693 191 190 148 49 chr15 14167520 14167581 -89327393 + MIRc SINE MIR 23 89 -179 2 693 24 0 0 0 chr15 14168218 14168242 -89326732 + AT_rich Low_complexity Low_complexity 1 24 0 2 693 237 355 0 0 chr15 14169155 14169231 -89325743 - BC1_Mm scRNA scRNA -69 83 8 2 693 31 76 0 0 chr15 14169460 14169526 -89325448 + AT_rich Low_complexity Low_complexity 1 66 0 2 693 485 146 0 10 chr15 14170305 14170402 -89324572 - L1_Mus3 LINE L1 0 6638 6543 2 693 2798 264 35 8 chr15 14170451 14171174 -89323800 + Lx7 LINE L1 6372 7113 -583 2 693 1854 168 24 18 chr15 14171174 14171513 -89323461 + RMER20B LTR ERVK 1 341 -286 2 693 640 246 159 19 chr15 14171600 14171857 -89323117 + RMER20B LTR ERVK 335 627 0 2 693 1106 232 44 44 chr15 14171857 14172173 -89322801 + Lx7 LINE L1 7108 7423 -273 2 693 298 246 103 32 chr15 14172165 14172291 -89322683 + Lx7 LINE L1 7559 7693 -3 2 693 333 0 0 0 chr15 14172779 14172816 -89322158 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 2 693 1476 67 0 20 chr15 14173162 14173359 -89321615 - L1_Mus2 LINE L1 -317 6249 6057 2 693 2056 66 4 4 chr15 14173360 14173633 -89321341 + L1_Mus2 LINE L1 6292 6564 -2 2 693 936 355 26 26 chr15 14173647 14174252 -89320722 + Lx9 LINE L1 6635 7239 -405 2 693 360 0 0 0 chr15 14174518 14174558 -89320416 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 693 715 266 10 15 chr15 14174578 14174773 -89320201 - Lx9 LINE L1 -186 7458 7265 2 693 4803 194 20 3 chr15 14174775 14175723 -89319251 - Lx2 LINE L1 0 6997 6034 2 693 243 0 0 0 chr15 14175740 14175767 -89319207 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 693 1273 302 112 32 chr15 14175797 14176331 -89318643 + Lx9 LINE L1 6306 6882 -762 2 693 378 0 0 0 chr15 14176451 14176493 -89318481 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2 693 855 201 42 0 chr15 14177337 14177526 -89317448 + Lx2A1 LINE L1 6787 6983 -25 2 693 3947 51 4 2 chr15 14177521 14178012 -89316962 - L1Md_F2 LINE L1 -444 6138 5647 2 693 2557 58 12 9 chr15 14178012 14178345 -89316629 + L1Md_F2 LINE L1 6248 6581 -1 2 693 433 265 5 4 chr15 14178599 14178724 -89316250 + Lx6 LINE L1 6078 6215 -1481 2 693 1554 226 6 6 chr15 14178739 14179050 -89315924 + Lx6 LINE L1 6442 6752 -708 2 693 671 203 13 0 chr15 14179051 14179204 -89315770 + GA-rich Low_complexity Low_complexity 3 157 0 2 693 2408 263 70 12 chr15 14179204 14179873 -89315101 + Lx6 LINE L1 6742 7449 -11 2 693 395 360 20 7 chr15 14180078 14180229 -89314745 + RSINE1 SINE B4 11 163 -2 2 693 270 147 44 0 chr15 14181999 14182067 -89312907 + CT-rich Low_complexity Low_complexity 4 74 0 2 693 487 14 43 0 chr15 14182404 14182474 -89312500 + L1Md_F3 LINE L1 6512 6584 0 2 693 462 18 0 0 chr15 14183254 14183309 -89311665 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 693 189 0 0 0 chr15 14183708 14183729 -89311245 + (T)n Simple_repeat Simple_repeat 1 21 0 2 693 260 346 46 36 chr15 14184160 14184355 -89310619 + MIRb SINE MIR 22 218 -50 2 693 531 317 104 63 chr15 14185570 14186062 -89308912 - Lx8 LINE L1 -377 7096 6585 2 693 22 0 0 0 chr15 14186078 14186100 -89308874 + AT_rich Low_complexity Low_complexity 1 22 0 2 693 298 220 44 0 chr15 14186616 14186707 -89308267 - MER57A-int LTR ERV1 -227 5960 5866 2 693 22 0 0 0 chr15 14186707 14186729 -89308245 + AT_rich Low_complexity Low_complexity 1 22 0 2 693 216 0 0 0 chr15 14187225 14187249 -89307725 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 693 641 305 126 18 chr15 14187994 14188328 -89306646 - ORR1D2 LTR MaLR 0 370 1 2 693 26 30 0 0 chr15 14188824 14188857 -89306117 + AT_rich Low_complexity Low_complexity 1 33 0 2 693 25 65 0 0 chr15 14189692 14189738 -89305236 + AT_rich Low_complexity Low_complexity 1 46 0 2 693 21 36 0 0 chr15 14189745 14189773 -89305201 + AT_rich Low_complexity Low_complexity 1 28 0 2 693 22 35 0 0 chr15 14190725 14190754 -89304220 + AT_rich Low_complexity Low_complexity 1 29 0 2 693 336 48 0 0 chr15 14190888 14190930 -89304044 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 693 513 254 83 48 chr15 14190930 14191182 -89303792 - Lx9 LINE L1 -169 7475 7215 2 693 264 269 57 19 chr15 14191548 14191654 -89303320 - MLT1A0 LTR MaLR 0 365 256 2 693 248 376 21 28 chr15 14192515 14192660 -89302314 + RMER12 LTR ERVK 715 858 -464 2 693 652 307 7 0 chr15 14192648 14192798 -89302176 + B3 SINE B2 39 189 -27 2 693 897 110 0 0 chr15 14194047 14194183 -89300791 + (GGGA)n Simple_repeat Simple_repeat 1 136 0 2 693 1406 351 64 32 chr15 14194273 14195277 -89299697 + ERVL-B4-int LTR ERVL 4099 5134 -580 2 693 1017 70 35 0 chr15 14195468 14195611 -89299363 - L1_Mus3 LINE L1 -296 6342 6195 3 693 204 238 37 12 chr15 14195662 14195743 -89299231 + (TA)n Simple_repeat Simple_repeat 1 83 0 3 693 417 292 171 37 chr15 14196134 14196433 -89298541 + RMER5 LTR ERV1 40 378 -156 3 693 659 305 19 47 chr15 14196706 14196919 -89298055 + MTEb LTR MaLR 4 210 -169 3 693 351 119 0 0 chr15 14196931 14196998 -89297976 + (TC)n Simple_repeat Simple_repeat 2 68 0 3 693 385 246 103 17 chr15 14197023 14197139 -89297835 + MTEb LTR MaLR 251 376 -3 3 693 234 0 0 0 chr15 14197353 14197379 -89297595 + (T)n Simple_repeat Simple_repeat 1 26 0 3 693 2535 88 90 0 chr15 14197447 14197812 -89297162 - MTB LTR MaLR -2 398 1 3 693 5594 134 99 14 chr15 14197812 14198824 -89296150 - MTB-int LTR MaLR 0 1098 1 3 693 2934 88 2 2 chr15 14198824 14199224 -89295750 - MTB LTR MaLR 0 400 1 3 693 639 39 0 0 chr15 14199242 14199320 -89295654 + (TATG)n Simple_repeat Simple_repeat 4 81 0 3 693 22 0 0 0 chr15 14200383 14200405 -89294569 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 886 375 105 65 chr15 14200419 14201630 -89293344 - MTE-int LTR MaLR -281 1299 41 3 693 450 0 0 0 chr15 14201703 14201753 -89293221 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 693 1808 84 8 11 chr15 14201753 14202019 -89292955 - L1_Mus4 LINE L1 -12 6624 6360 3 693 24 53 0 0 chr15 14202892 14202930 -89292044 + AT_rich Low_complexity Low_complexity 1 38 0 3 693 471 35 0 0 chr15 14203103 14203160 -89291814 + (TA)n Simple_repeat Simple_repeat 2 58 0 3 693 180 152 0 0 chr15 14203160 14203193 -89291781 + GA-rich Low_complexity Low_complexity 1 33 0 3 693 1540 189 34 141 chr15 14203650 14204124 -89290850 + RLTR23 LTR ERV1 1 423 -7 3 693 24 85 0 0 chr15 14204232 14204291 -89290683 + AT_rich Low_complexity Low_complexity 1 59 0 3 693 335 308 62 15 chr15 14204613 14204789 -89290185 + MIRm SINE MIR 20 208 -54 3 693 2673 170 61 23 chr15 14205877 14206436 -89288538 + RMER6C LTR ERVK 111 690 0 3 693 273 57 0 0 chr15 14206661 14206696 -89288278 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 693 330 98 0 0 chr15 14207098 14207149 -89287825 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 693 266 148 19 0 chr15 14207181 14207235 -89287739 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 693 327 373 39 22 chr15 14207583 14207764 -89287210 - LTR33 LTR ERVL -8 507 324 3 693 22 0 0 0 chr15 14207969 14207991 -89286983 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 555 282 36 78 chr15 14208241 14208460 -89286514 + B3A SINE B2 2 211 -5 3 693 328 305 159 51 chr15 14208640 14208816 -89286158 + B4A SINE B4 82 276 -16 3 693 241 322 32 65 chr15 14209003 14209078 -89285896 - PB1D7 SINE Alu -49 98 22 3 693 509 0 16 0 chr15 14209078 14209139 -89285835 + (TG)n Simple_repeat Simple_repeat 2 63 0 3 693 215 322 32 65 chr15 14209139 14209156 -89285818 - B1_Mus2 SINE Alu -126 21 9 3 693 2792 177 89 0 chr15 14209366 14209914 -89285060 - Lx4A LINE L1 0 7058 6462 3 693 1207 133 19 19 chr15 14209909 14210123 -89284851 - L1_Mur2 LINE L1 -597 5280 5067 3 693 8236 196 41 9 chr15 14211466 14213469 -89281505 + L1_Mur2 LINE L1 1160 3228 -2649 3 693 665 147 26 0 chr15 14213475 14213631 -89281343 + GA-rich Low_complexity Low_complexity 1 160 0 3 693 296 200 0 0 chr15 14213659 14213719 -89281255 - ORR1C1 LTR MaLR -318 60 1 3 693 425 306 138 63 chr15 14214177 14214540 -89280434 + L1M5 LINE L1 5361 5750 -429 3 693 3617 93 44 7 chr15 14214557 14215100 -89279874 - L1_Mus4 LINE L1 -9 6627 6065 3 693 1580 63 0 0 chr15 14215770 14215961 -89279013 + L1Md_F3 LINE L1 5396 5586 -297 3 693 8215 39 0 2 chr15 14215962 14216959 -89278015 + L1Md_F3 LINE L1 5588 6582 -2 3 693 23 0 0 0 chr15 14217937 14217960 -89277014 + AT_rich Low_complexity Low_complexity 1 23 0 3 693 586 285 72 10 chr15 14218052 14218247 -89276727 - Lx8 LINE L1 -130 7343 7137 3 693 198 0 0 0 chr15 14218329 14218351 -89276623 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 3 693 27764 81 21 14 chr15 14218381 14220653 -89274321 - L1Md_F2 LINE L1 -13 6569 4348 3 693 1088 90 7 0 chr15 14220653 14220797 -89274177 - B1_Mm SINE Alu 0 147 3 3 693 27764 104 27 15 chr15 14220797 14224634 -89270340 - L1Md_F2 LINE L1 -1536 4347 359 3 693 247 219 31 0 chr15 14224652 14224716 -89270258 - Lx5 LINE L1 -3 7047 6982 3 693 246 95 0 0 chr15 14224719 14224761 -89270213 + (TTTTA)n Simple_repeat Simple_repeat 4 45 0 3 693 1085 98 0 0 chr15 14224762 14224905 -89270069 - B1_Mm SINE Alu -4 143 1 3 693 2979 266 95 29 chr15 14224938 14225275 -89269699 - Lx5 LINE L1 -79 6971 6633 3 693 351 0 0 0 chr15 14225275 14225314 -89269660 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 693 2979 266 95 29 chr15 14225314 14225975 -89268999 - Lx5 LINE L1 -418 6632 5908 3 693 569 337 140 42 chr15 14225979 14226684 -89268290 - RMER1C Other Other -19 1323 549 3 693 495 304 16 0 chr15 14227044 14227169 -89267805 - Lx8 LINE L1 -333 7140 7014 3 693 758 207 81 43 chr15 14227169 14227638 -89267336 - RLTR13D1 LTR ERVK 0 902 413 3 693 1310 147 0 5 chr15 14227638 14227836 -89267138 - RLTR13D6 LTR ERVK -705 197 1 3 693 807 263 65 34 chr15 14227836 14228127 -89266847 - Lx8 LINE L1 -454 7019 6720 3 693 296 236 8 0 chr15 14228135 14228219 -89266755 - L1MC1 LINE L1 -18 6326 6239 3 693 21 82 0 0 chr15 14228426 14228475 -89266499 + AT_rich Low_complexity Low_complexity 1 49 0 3 693 6478 76 7 25 chr15 14228777 14229692 -89265282 + L1Md_F2 LINE L1 5685 6582 0 3 693 404 62 16 0 chr15 14231334 14231398 -89263576 + (CAAAA)n Simple_repeat Simple_repeat 2 66 0 3 693 23 0 0 0 chr15 14231622 14231645 -89263329 + AT_rich Low_complexity Low_complexity 1 23 0 3 693 289 316 33 33 chr15 14231645 14231766 -89263208 + MER68 LTR ERVL 246 366 -197 3 693 375 23 0 0 chr15 14231772 14231816 -89263158 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 693 324 0 0 0 chr15 14232121 14232157 -89262817 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 693 384 307 140 29 chr15 14233856 14234242 -89260732 + L1_Rod LINE L1 5258 5686 -605 3 693 657 63 0 0 chr15 14234252 14234347 -89260627 + (TC)n Simple_repeat Simple_repeat 2 96 0 3 693 22 0 0 0 chr15 14235063 14235085 -89259889 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 829 88 0 0 chr15 14235213 14235326 -89259648 - B1_Mus2 SINE Alu -1 146 34 3 693 559 277 0 20 chr15 14235487 14235638 -89259336 - Lx6 LINE L1 -55 7405 7258 3 693 300 281 0 0 chr15 14235639 14235703 -89259271 - B3A SINE B2 -132 66 3 3 693 366 221 37 77 chr15 14235949 14236091 -89258883 - Lx6 LINE L1 -184 7276 7147 3 693 684 36 0 0 chr15 14236121 14236204 -89258770 + (TA)n Simple_repeat Simple_repeat 1 83 0 3 693 312 28 0 0 chr15 14236204 14236240 -89258734 + HAL1-3A_ME LINE L1 1977 2012 -846 3 693 349 258 10 30 chr15 14236416 14236516 -89258458 - Lx6 LINE L1 -675 6785 6688 3 693 2985 50 3 5 chr15 14237780 14238162 -89256812 + L1Md_F2 LINE L1 6200 6580 -2 3 693 906 131 0 0 chr15 14238174 14238319 -89256655 + (T)n Simple_repeat Simple_repeat 1 145 0 3 693 1377 255 3 53 chr15 14238376 14238753 -89256221 - Lx2B LINE L1 -1 6999 6642 3 693 535 326 0 7 chr15 14240331 14240479 -89254495 + B3 SINE B2 9 155 -61 3 693 445 136 0 74 chr15 14240453 14240548 -89254426 + B1_Mus2 SINE Alu 60 147 0 3 693 325 25 22 90 chr15 14240548 14240637 -89254337 + (TAAA)n Simple_repeat Simple_repeat 4 86 0 3 693 250 323 0 94 chr15 14240981 14241087 -89253887 + PB1D7 SINE Alu 23 118 -2 3 693 23 0 0 0 chr15 14241286 14241309 -89253665 + AT_rich Low_complexity Low_complexity 1 23 0 3 693 34703 72 1 6 chr15 14242394 14248501 -89246473 - L1Md_F2 LINE L1 0 6585 411 3 693 1477 136 120 4 chr15 14248597 14248871 -89246103 + Lx2B LINE L1 6688 6993 -7 3 693 201 269 0 0 chr15 14249411 14249478 -89245496 + (CATATA)n Simple_repeat Simple_repeat 5 71 0 3 693 579 183 12 24 chr15 14249478 14249646 -89245328 + Lx9 LINE L1 7477 7642 -2 3 693 546 29 0 0 chr15 14250021 14250089 -89244885 + (CA)n Simple_repeat Simple_repeat 2 69 0 3 693 629 229 134 10 chr15 14250339 14250533 -89244441 - L1_Rod LINE L1 -784 5063 4846 3 693 23 0 0 0 chr15 14251790 14251813 -89243161 + AT_rich Low_complexity Low_complexity 1 23 0 3 693 27 62 0 0 chr15 14252003 14252051 -89242923 + AT_rich Low_complexity Low_complexity 1 48 0 3 693 437 286 82 20 chr15 14252849 14253154 -89241820 + L1MB2 LINE L1 5838 6158 -25 3 693 1061 233 30 27 chr15 14253331 14253455 -89241519 + RLTR12A LTR ERVK 3 129 -439 3 693 484 132 32 21 chr15 14253455 14253548 -89241426 + Lx3A LINE L1 6878 6971 -10 3 693 1061 233 30 27 chr15 14253548 14253664 -89241310 + RLTR12A LTR ERVK 130 241 -327 3 693 648 0 0 0 chr15 14253664 14253736 -89241238 + (GA)n Simple_repeat Simple_repeat 1 72 0 3 693 1061 233 30 27 chr15 14253736 14253790 -89241184 + RLTR12A LTR ERVK 242 299 -269 3 693 503 237 28 125 chr15 14253965 14254060 -89240914 - Lx9 LINE L1 -18 7626 7531 3 693 488 83 31 10 chr15 14254060 14254157 -89240817 + (TCTA)n Simple_repeat Simple_repeat 4 102 0 3 693 503 237 28 125 chr15 14254157 14254209 -89240765 - Lx9 LINE L1 -114 7530 7501 3 693 282 56 0 0 chr15 14254209 14254245 -89240729 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 693 503 237 28 125 chr15 14254245 14254448 -89240526 - Lx9 LINE L1 -144 7500 7309 3 693 600 292 3 3 chr15 14254472 14254643 -89240331 + Lx9 LINE L1 6893 7193 -451 3 693 21 0 0 0 chr15 14255573 14255594 -89239380 + AT_rich Low_complexity Low_complexity 1 21 0 3 693 595 199 6 30 chr15 14255595 14255761 -89239213 - Lx9 LINE L1 -6 7638 7477 3 693 491 253 43 11 chr15 14255786 14255970 -89239004 - Lx9 LINE L1 -128 7516 7327 3 693 413 116 14 0 chr15 14256894 14256963 -89238011 + (GA)n Simple_repeat Simple_repeat 2 71 0 3 693 21 0 0 0 chr15 14257549 14257570 -89237404 + AT_rich Low_complexity Low_complexity 1 21 0 3 693 3067 75 0 12 chr15 14257602 14258007 -89236967 + MTB LTR MaLR 1 400 0 3 693 238 375 6 38 chr15 14258281 14258439 -89236535 - L2a LINE L2 -14 3412 3260 3 693 339 250 0 0 chr15 14258481 14258557 -89236417 + ORR1D1 LTR MaLR 1 76 -298 3 693 407 68 0 17 chr15 14258558 14258618 -89236356 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 3 693 923 44 0 0 chr15 14258630 14258744 -89236230 - B1_Mm SINE Alu 0 147 34 3 693 195 100 0 0 chr15 14258754 14258784 -89236190 + (G)n Simple_repeat Simple_repeat 1 30 0 4 693 279 172 52 0 chr15 14258784 14258842 -89236132 + ORR1D1 LTR MaLR 61 121 -253 3 693 972 43 22 0 chr15 14258948 14259086 -89235888 + (GA)n Simple_repeat Simple_repeat 2 142 0 4 693 309 51 0 0 chr15 14259465 14259504 -89235470 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 693 1880 199 29 2 chr15 14259856 14260265 -89234709 - BGLII_Mus LTR ERVK 0 422 3 4 693 489 198 0 0 chr15 14260655 14260756 -89234218 + (TA)n Simple_repeat Simple_repeat 2 102 0 4 693 25 0 0 0 chr15 14261684 14261709 -89233265 + AT_rich Low_complexity Low_complexity 1 25 0 4 693 554 377 15 0 chr15 14262214 14262407 -89232567 - ORR1D2 LTR MaLR -176 202 3 4 693 790 127 6 29 chr15 14262433 14262604 -89232370 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 4 693 28 29 0 0 chr15 14262922 14262957 -89232017 + AT_rich Low_complexity Low_complexity 1 35 0 4 693 24 0 0 0 chr15 14264439 14264463 -89230511 + AT_rich Low_complexity Low_complexity 1 24 0 4 693 279 0 0 0 chr15 14265107 14265138 -89229836 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 693 31 26 0 0 chr15 14265532 14265570 -89229404 + AT_rich Low_complexity Low_complexity 1 38 0 4 693 430 304 32 8 chr15 14265683 14265809 -89229165 + RSINE1 SINE B4 4 132 -33 4 693 1130 112 0 6 chr15 14266246 14266425 -89228549 + (TTC)n Simple_repeat Simple_repeat 3 180 0 4 693 462 114 0 33 chr15 14266425 14266516 -89228458 + (TCC)n Simple_repeat Simple_repeat 2 89 0 4 693 446 0 0 18 chr15 14266516 14266571 -89228403 + (TTA)n Simple_repeat Simple_repeat 2 55 0 4 693 7893 114 25 11 chr15 14266574 14267637 -89227337 - Lx3A LINE L1 -5 6976 5906 4 693 198 71 0 0 chr15 14267637 14267665 -89227309 + (TTG)n Simple_repeat Simple_repeat 2 29 0 4 693 7893 114 25 11 chr15 14267665 14267843 -89227131 - Lx3A LINE L1 -1076 5905 5720 4 693 198 103 0 0 chr15 14268891 14268920 -89226054 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 693 259 224 0 0 chr15 14269214 14269272 -89225702 - MER2 DNA MER2_type -162 183 126 4 693 28 0 0 0 chr15 14269878 14269906 -89225068 + AT_rich Low_complexity Low_complexity 1 28 0 4 693 27 49 0 0 chr15 14270389 14270430 -89224544 + AT_rich Low_complexity Low_complexity 1 41 0 4 693 44 70 0 0 chr15 14270531 14270617 -89224357 + AT_rich Low_complexity Low_complexity 1 86 0 4 693 469 280 87 29 chr15 14270744 14270917 -89224057 - B3A SINE B2 -15 183 1 4 693 261 338 62 27 chr15 14271935 14272081 -89222893 - MLT1B LTR MaLR 0 390 240 4 693 248 344 82 0 chr15 14272357 14272479 -89222495 + MLT1A1 LTR MaLR 4 135 -273 4 693 941 227 225 23 chr15 14272556 14272793 -89222181 - ORR1D1 LTR MaLR -5 369 71 4 693 2688 213 25 12 chr15 14272793 14273396 -89221578 + RMER19C LTR ERVK 1 611 0 4 693 941 227 225 23 chr15 14273396 14273465 -89221509 - ORR1D1 LTR MaLR -304 70 1 4 693 180 113 36 36 chr15 14273589 14273644 -89221330 + (TATG)n Simple_repeat Simple_repeat 2 56 0 4 693 192 135 0 0 chr15 14273680 14273717 -89221257 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 693 545 218 29 9 chr15 14275388 14275522 -89219452 + Lx9 LINE L1 6772 7034 -610 4 693 23 33 0 0 chr15 14276682 14276712 -89218262 + AT_rich Low_complexity Low_complexity 1 30 0 4 693 24 67 0 0 chr15 14277804 14277849 -89217125 + AT_rich Low_complexity Low_complexity 1 45 0 4 693 401 115 0 13 chr15 14278679 14278758 -89216216 + (CA)n Simple_repeat Simple_repeat 1 78 0 4 693 699 313 22 19 chr15 14278900 14279234 -89215740 + L1MA4 LINE L1 5537 5938 -362 4 693 1039 101 0 0 chr15 14279438 14279586 -89215388 + B1_Mus1 SINE Alu 1 148 0 4 693 5386 173 121 8 chr15 14279658 14281067 -89213907 + Lx2 LINE L1 5394 6974 -2 4 693 433 307 16 16 chr15 14281361 14281490 -89213484 + MTEa LTR MaLR 249 377 -2 4 693 25 65 0 0 chr15 14281728 14281774 -89213200 + AT_rich Low_complexity Low_complexity 1 46 0 4 693 284 152 43 21 chr15 14282044 14282138 -89212836 + (CATA)n Simple_repeat Simple_repeat 4 99 0 4 693 222 229 21 0 chr15 14283426 14283474 -89211500 + (TATG)n Simple_repeat Simple_repeat 3 51 0 4 693 1062 90 0 7 chr15 14283751 14283897 -89211077 - B1_Mm SINE Alu -1 146 2 4 693 21377 162 7 66 chr15 14283950 14286454 -89208520 - L1Md_F2 LINE L1 -14 6568 4071 4 86 743 278 67 104 chr15 14286454 14286856 -89208118 + RLTR9C LTR ERVK 1 387 -6 4 694 21377 162 7 66 chr15 14286856 14290301 -89204673 - L1Md_F2 LINE L1 -14 4070 631 4 694 343 352 84 8 chr15 14290510 14290759 -89204215 - Lx8 LINE L1 -218 7255 6988 4 694 229 330 25 17 chr15 14290831 14290951 -89204023 + MLT1D LTR MaLR 383 503 -2 4 694 315 104 0 0 chr15 14291162 14291210 -89203764 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 694 206 121 61 0 chr15 14291395 14291461 -89203513 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 4 694 543 370 56 27 chr15 14291552 14292071 -89202903 - Lx8 LINE L1 -844 6629 6096 4 694 253 344 72 6 chr15 14292110 14292291 -89202683 + Lx7 LINE L1 2589 2781 -3099 4 694 441 286 71 46 chr15 14292481 14292804 -89202170 + Lx7 LINE L1 4695 5025 -855 4 694 4615 234 18 17 chr15 14292795 14293810 -89201164 + Lx5 LINE L1 6035 7050 0 4 694 876 318 86 27 chr15 14293790 14294604 -89200370 + Lx7 LINE L1 5013 5917 -1727 4 694 936 245 125 60 chr15 14294838 14295303 -89199671 + Lx7 LINE L1 6866 7360 -336 4 694 338 231 0 0 chr15 14295615 14295680 -89199294 - B3 SINE B2 0 216 152 4 694 270 273 48 39 chr15 14295665 14295768 -89199206 - B2_Mm2 SINE B2 -91 104 1 4 694 1462 262 28 83 chr15 14296673 14297239 -89197735 - Lx7 LINE L1 -584 7112 6578 4 694 1051 109 0 0 chr15 14297249 14297396 -89197578 - B1_Mus2 SINE Alu 0 147 1 4 694 2858 0 0 0 chr15 14297868 14298187 -89196787 - L1Md_T LINE L1 0 6582 6264 4 694 28 0 0 0 chr15 14298682 14298710 -89196264 + AT_rich Low_complexity Low_complexity 1 28 0 4 694 1218 121 0 0 chr15 14300179 14300361 -89194613 - L1_Mur2 LINE L1 -682 5195 5014 4 694 5193 202 94 28 chr15 14300345 14302069 -89192905 + Lx4B LINE L1 5185 7058 0 4 694 21 0 0 0 chr15 14302106 14302127 -89192847 + AT_rich Low_complexity Low_complexity 1 21 0 4 694 7332 131 28 3 chr15 14302568 14303765 -89191209 - L1_Mur1 LINE L1 -40 5846 4621 4 694 396 59 0 0 chr15 14303955 14304006 -89190968 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 694 229 180 66 0 chr15 14305390 14305451 -89189523 + Lx6 LINE L1 7396 7460 0 4 694 1127 217 86 0 chr15 14305615 14305929 -89189045 - Lx9 LINE L1 0 7644 7304 4 694 31 58 0 0 chr15 14306214 14306266 -89188708 + AT_rich Low_complexity Low_complexity 1 52 0 4 694 23 33 0 0 chr15 14306915 14306945 -89188029 + AT_rich Low_complexity Low_complexity 1 30 0 4 694 639 136 134 13 chr15 14307375 14307524 -89187450 + Lx LINE L1 6485 6651 -3 4 694 1456 356 61 20 chr15 14309671 14310583 -89184391 - Lx8 LINE L1 -184 7289 6340 4 694 1922 101 24 3 chr15 14310851 14311139 -89183835 - L1_Mus3 LINE L1 -184 6454 6161 4 694 3132 89 11 0 chr15 14311136 14311573 -89183401 + L1_Mus3 LINE L1 5697 6138 -498 4 694 740 160 13 35 chr15 14312006 14312190 -89182784 + L1_Mur2 LINE L1 4056 4204 -1643 4 694 314 294 69 31 chr15 14312301 14312431 -89182543 - Lx8 LINE L1 -333 7140 7006 4 694 24 0 0 0 chr15 14312431 14312455 -89182519 + AT_rich Low_complexity Low_complexity 1 24 0 4 694 1385 206 24 86 chr15 14312455 14312827 -89182147 - Lx2B LINE L1 -19 6981 6633 4 694 1183 148 0 0 chr15 14312824 14313007 -89181967 - L1_Mur1 LINE L1 -659 5218 5036 4 694 1382 115 0 27 chr15 14313006 14313229 -89181745 - L1_Mur1 LINE L1 -2169 3717 3501 4 694 216 214 0 0 chr15 14313367 14313423 -89181551 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 694 22 0 0 0 chr15 14313807 14313829 -89181145 + AT_rich Low_complexity Low_complexity 1 22 0 4 694 3118 185 36 10 chr15 14314032 14314612 -89180362 + RLTR17 LTR ERVK 98 692 0 4 694 6016 117 39 12 chr15 14314657 14315615 -89179359 + Lx3A LINE L1 5985 6967 -14 4 694 540 111 0 0 chr15 14315617 14315698 -89179276 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 4 694 1030 284 79 9 chr15 14316421 14316762 -89178212 - Lx8 LINE L1 -2 7471 7107 4 694 1083 65 0 0 chr15 14317123 14317261 -89177713 + B1_Mus1 SINE Alu 1 138 -10 4 694 315 0 0 0 chr15 14317261 14317296 -89177678 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 694 396 0 0 0 chr15 14317378 14317422 -89177552 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 694 1368 319 52 29 chr15 14317431 14318012 -89176962 + Lx8 LINE L1 6200 6793 -680 4 694 337 300 41 131 chr15 14319562 14319807 -89175167 + MLT1A LTR MaLR 1 223 -142 4 694 575 156 181 21 chr15 14319970 14320114 -89174860 - L1_Mus4 LINE L1 -10 6626 6460 4 694 821 130 24 0 chr15 14320094 14320217 -89174757 + Lx2 LINE L1 6692 6817 -180 4 694 377 367 38 48 chr15 14320508 14320694 -89174280 - Tigger5 DNA MER2_type -2210 196 13 4 694 22 0 0 0 chr15 14323324 14323346 -89171628 + AT_rich Low_complexity Low_complexity 1 22 0 4 694 1218 80 0 0 chr15 14324010 14324186 -89170788 + (TTCTC)n Simple_repeat Simple_repeat 3 178 0 4 694 180 97 0 0 chr15 14324207 14324238 -89170736 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 4 694 1733 205 3 14 chr15 14324308 14324659 -89170315 - Lx4B LINE L1 -429 6629 6283 4 694 2882 52 52 0 chr15 14324664 14325033 -89169941 + RLTR10 LTR ERVK 1 388 -2 4 694 1359 58 6 0 chr15 14325045 14325216 -89169758 + RLTR10-int LTR ERVK 41 212 -1775 4 694 265 200 38 95 chr15 14325241 14325346 -89169628 + RLTR10 LTR ERVK 292 390 0 4 694 2165 43 139 0 chr15 14325346 14325707 -89169267 + RLTR10-int LTR ERVK 302 793 -1194 4 694 1750 218 12 5 chr15 14325713 14326118 -89168856 - Lx4B LINE L1 -779 6279 5872 4 694 478 250 24 29 chr15 14326117 14326300 -89168674 + Lx4B LINE L1 6734 6988 -70 4 694 23 0 0 0 chr15 14326321 14326344 -89168630 + AT_rich Low_complexity Low_complexity 1 23 0 4 694 567 122 0 0 chr15 14326402 14326492 -89168482 + (TG)n Simple_repeat Simple_repeat 1 90 0 4 694 1625 183 0 0 chr15 14326493 14326782 -89168192 + ORR1A3 LTR MaLR 6 294 -32 4 694 7601 164 127 81 chr15 14326771 14327614 -89167360 + ORR1A3-int LTR MaLR 15 1028 -935 4 694 3270 43 9 12 chr15 14327614 14328033 -89166941 + L1Md_F3 LINE L1 6167 6584 0 4 694 7601 164 127 81 chr15 14328033 14329052 -89165922 + ORR1A3-int LTR MaLR 1029 1963 0 4 694 1836 182 6 0 chr15 14329052 14329376 -89165598 + ORR1A3 LTR MaLR 1 326 0 4 694 226 237 16 33 chr15 14329379 14329440 -89165534 - RMER12 LTR ERVK -518 804 745 4 694 332 279 83 40 chr15 14331649 14331877 -89163097 + L1MA6 LINE L1 6046 6283 -17 4 694 310 299 42 54 chr15 14331930 14332096 -89162878 + MLT1D LTR MaLR 319 482 -23 5 694 2966 48 11 0 chr15 14332266 14332641 -89162333 + L1_Mus1 LINE L1 6189 6567 0 5 694 609 14 0 0 chr15 14332692 14332762 -89162212 + (TG)n Simple_repeat Simple_repeat 2 71 0 5 694 315 0 0 0 chr15 14332846 14332881 -89162093 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 694 940 88 0 0 chr15 14332881 14333006 -89161968 - B1_Mm SINE Alu -8 139 15 5 694 718 230 63 11 chr15 14332998 14333278 -89161696 + RLTR40 LTR ERVK 376 753 -64 5 694 1377 44 5 16 chr15 14333279 14333463 -89161511 - L1Md_F3 LINE L1 -12 6572 6391 5 694 1973 137 3 4 chr15 14333463 14333776 -89161198 + RLTR10E LTR ERVK 1 388 -2 5 694 8253 56 33 30 chr15 14333778 14335237 -89159737 - L1Md_F3 LINE L1 -188 6396 4903 5 694 236 167 46 77 chr15 14335237 14335302 -89159672 + RMER20A LTR ERVK 186 248 -268 5 694 8253 56 33 30 chr15 14335302 14335546 -89159428 - L1Md_F3 LINE L1 -188 4902 4651 5 694 26 0 0 0 chr15 14335607 14335633 -89159341 + AT_rich Low_complexity Low_complexity 1 26 0 5 694 600 275 32 53 chr15 14335638 14335826 -89159148 - B3 SINE B2 -15 201 18 5 694 21 57 0 0 chr15 14335979 14336014 -89158960 + AT_rich Low_complexity Low_complexity 1 35 0 5 694 701 273 67 5 chr15 14336669 14336879 -89158095 - MTD LTR MaLR 0 419 197 5 694 290 216 14 0 chr15 14336879 14336953 -89158021 + CT-rich Low_complexity Low_complexity 3 77 0 5 694 5586 99 24 1 chr15 14336978 14337773 -89157201 - L1_Mus1 LINE L1 -67 6500 5688 5 694 388 214 0 0 chr15 14337759 14337829 -89157145 + L1VL1 LINE L1 16 85 -6337 5 694 545 363 5 0 chr15 14337837 14338038 -89156936 - MTD LTR MaLR -217 202 1 5 694 2298 127 35 58 chr15 14339556 14339858 -89155116 + Lx LINE L1 6232 6534 -120 5 694 180 0 0 0 chr15 14339858 14339878 -89155096 + (TGGG)n Simple_repeat Simple_repeat 1 20 0 5 694 2298 127 35 58 chr15 14339878 14340002 -89154972 + Lx LINE L1 6535 6647 -7 5 694 320 355 17 17 chr15 14340048 14340220 -89154754 + Lx9 LINE L1 7197 7368 -276 5 694 207 0 0 0 chr15 14340954 14340977 -89153997 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 694 306 0 0 0 chr15 14341464 14341498 -89153476 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 694 216 122 0 0 chr15 14341499 14341540 -89153434 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 694 25 0 0 0 chr15 14341575 14341600 -89153374 + AT_rich Low_complexity Low_complexity 1 25 0 5 694 3115 89 7 7 chr15 14341829 14342282 -89152692 + L1_Mus3 LINE L1 6186 6638 0 5 694 3033 66 5 2 chr15 14342979 14343375 -89151599 - L1_Mus2 LINE L1 0 6566 6170 5 694 927 103 5 0 chr15 14343375 14343517 -89151457 + L1_Mus2 LINE L1 6049 6200 -384 5 694 3544 10 2 0 chr15 14344334 14344729 -89150245 + MTA_Mm LTR MaLR 1 396 0 5 694 8941 40 6 1 chr15 14344729 14345822 -89149152 + MTA_Mm-int LTR MaLR 1 1098 0 5 694 3555 8 2 0 chr15 14345822 14346217 -89148757 + MTA_Mm LTR MaLR 1 396 0 5 694 252 0 0 0 chr15 14347759 14347787 -89147187 + (T)n Simple_repeat Simple_repeat 1 28 0 5 694 1129 73 0 41 chr15 14347903 14348145 -89146829 + (GGGAGA)n Simple_repeat Simple_repeat 1 232 0 5 694 524 130 0 20 chr15 14348578 14348680 -89146294 + Lx LINE L1 6552 6651 -3 5 694 402 129 0 0 chr15 14350308 14350393 -89144581 + (T)n Simple_repeat Simple_repeat 1 85 0 5 694 579 29 0 0 chr15 14350476 14350545 -89144429 + (TTCC)n Simple_repeat Simple_repeat 4 72 0 5 694 556 136 8 8 chr15 14350554 14350680 -89144294 + CT-rich Low_complexity Low_complexity 1 126 0 5 694 222 174 0 0 chr15 14351172 14351218 -89143756 + T-rich Low_complexity Low_complexity 1 46 0 5 694 315 0 0 0 chr15 14351934 14351969 -89143005 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 694 194 0 0 37 chr15 14353125 14353152 -89141822 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 5 694 429 70 0 0 chr15 14353734 14353791 -89141183 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 694 1605 101 4 34 chr15 14353910 14353942 -89141032 + BGLII LTR ERVK 1 30 -391 5 694 647 83 25 16 chr15 14353942 14354064 -89140910 - L1_Mus3 LINE L1 0 6638 6516 5 694 1605 101 4 34 chr15 14354064 14354298 -89140676 + BGLII LTR ERVK 31 259 -162 5 694 209 55 0 53 chr15 14354298 14354321 -89140653 + (GGAGAA)n Simple_repeat Simple_repeat 5 27 0 5 694 1179 117 0 0 chr15 14354321 14354501 -89140473 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 694 209 55 0 53 chr15 14354501 14354515 -89140459 + (GGAGAA)n Simple_repeat Simple_repeat 4 15 0 5 694 380 150 317 10 chr15 14354516 14354617 -89140357 + URR1B DNA MER1_type 94 225 0 5 694 882 0 0 0 chr15 14354776 14354874 -89140100 + (GGAAA)n Simple_repeat Simple_repeat 1 98 0 5 694 279 298 0 0 chr15 14355288 14355372 -89139602 + (CATATA)n Simple_repeat Simple_repeat 3 86 0 5 694 21 36 0 0 chr15 14355944 14355972 -89139002 + AT_rich Low_complexity Low_complexity 1 28 0 5 694 554 279 36 0 chr15 14356167 14356332 -89138642 - Lx9 LINE L1 -233 7411 7241 5 694 1795 222 186 21 chr15 14356334 14356803 -89138171 - RMER19B LTR ERVK 0 902 357 5 694 1079 236 75 51 chr15 14356850 14357181 -89137793 - Lx9 LINE L1 -396 7248 6910 5 694 205 86 29 0 chr15 14358616 14358651 -89136323 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 5 694 450 324 80 11 chr15 14358698 14358960 -89136014 + Lx8 LINE L1 6808 7087 -386 5 694 646 288 69 69 chr15 14359406 14359541 -89135433 + Lx8 LINE L1 7111 7247 -226 5 694 2671 174 198 3 chr15 14359541 14360158 -89134816 + RMER19A LTR ERVK 1 737 0 5 694 646 288 69 69 chr15 14360158 14360384 -89134590 + Lx8 LINE L1 7248 7472 -1 5 694 201 74 0 0 chr15 14361028 14361055 -89133919 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 694 24 0 0 0 chr15 14361266 14361290 -89133684 + AT_rich Low_complexity Low_complexity 1 24 0 5 694 448 319 77 12 chr15 14361511 14361679 -89133295 + B3 SINE B2 33 211 -5 5 694 252 0 0 0 chr15 14361728 14361756 -89133218 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 5 694 4850 108 34 1 chr15 14361762 14362464 -89132510 - Lx LINE L1 -6 6648 5924 5 694 3727 11 121 0 chr15 14362464 14362904 -89132070 + MT2_Mm LTR ERVL 1 493 0 5 694 47358 15 6 0 chr15 14362904 14368230 -89126744 + MERVL-int LTR ERVL 1 5360 -125 5 694 385 167 46 35 chr15 14368230 14368317 -89126657 + ORR1A3-int LTR MaLR 553 640 -1323 5 694 314 0 0 0 chr15 14368317 14368355 -89126619 + MERVL-int LTR ERVL 5448 5485 0 5 694 3702 14 121 0 chr15 14368355 14368795 -89126179 + MT2_Mm LTR ERVL 1 493 0 5 694 225 158 0 0 chr15 14368795 14368833 -89126141 - Lx LINE L1 -726 5928 5891 5 694 519 17 0 0 chr15 14369025 14369085 -89125889 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 694 459 0 0 0 chr15 14369085 14369135 -89125839 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 694 232 236 0 18 chr15 14369282 14369338 -89125636 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 694 3559 81 6 2 chr15 14369378 14369948 -89125026 - L1_Mus1 LINE L1 0 6567 6094 5 694 525 32 0 0 chr15 14370620 14370683 -89124291 + (GA)n Simple_repeat Simple_repeat 1 63 0 5 694 958 84 61 0 chr15 14371020 14371151 -89123823 + B1_Mus1 SINE Alu 2 140 -8 5 694 1237 118 0 16 chr15 14371919 14372108 -89122866 - B2_Mm2 SINE B2 -9 186 1 5 694 249 33 0 0 chr15 14373793 14373823 -89121151 + (TA)n Simple_repeat Simple_repeat 1 30 0 5 694 735 146 0 0 chr15 14374381 14374539 -89120435 + (GA)n Simple_repeat Simple_repeat 1 158 0 5 694 499 53 27 0 chr15 14374766 14374841 -89120133 + (TA)n Simple_repeat Simple_repeat 1 77 0 5 694 581 348 29 110 chr15 14375738 14376148 -89118826 - MTE2a LTR MaLR 0 379 3 5 694 21 36 0 0 chr15 14378415 14378443 -89116531 + AT_rich Low_complexity Low_complexity 1 28 0 5 694 5899 114 12 16 chr15 14378622 14379524 -89115450 - Lx LINE L1 -8 6646 5748 5 694 1038 97 14 0 chr15 14380163 14380308 -89114666 + B1_Mus1 SINE Alu 2 148 0 5 694 25 31 0 0 chr15 14380630 14380662 -89114312 + AT_rich Low_complexity Low_complexity 1 32 0 5 694 28 0 0 0 chr15 14380879 14380907 -89114067 + AT_rich Low_complexity Low_complexity 1 28 0 5 694 280 141 15 30 chr15 14380907 14380973 -89114001 - Lx4A LINE L1 0 7058 6994 5 694 214 366 24 0 chr15 14381671 14381753 -89113221 + L2 LINE L2 2692 2775 -644 5 694 386 20 0 19 chr15 14381914 14381966 -89113008 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 694 429 20 0 0 chr15 14381975 14382025 -89112949 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 694 246 299 11 0 chr15 14382066 14382153 -89112821 + (TG)n Simple_repeat Simple_repeat 1 88 0 5 694 515 16 16 0 chr15 14382220 14382284 -89112690 + (TC)n Simple_repeat Simple_repeat 2 66 0 5 694 333 0 0 0 chr15 14382284 14382320 -89112654 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 694 436 394 43 32 chr15 14382320 14382598 -89112376 - B4A SINE B4 -10 282 2 5 694 21 0 0 0 chr15 14382864 14382885 -89112089 + AT_rich Low_complexity Low_complexity 1 21 0 5 694 249 400 40 27 chr15 14384739 14384888 -89110086 + RMER15 LTR ERVL 335 485 -90 5 694 492 148 0 0 chr15 14384958 14385066 -89109908 + (CA)n Simple_repeat Simple_repeat 2 109 0 5 694 8332 39 4 1 chr15 14385429 14386840 -89108134 - L1Md_F3 LINE L1 -2 6582 5166 5 694 811 342 29 31 chr15 14387562 14388048 -89106926 + RMER15-int LTR ERVL 649 1133 -3866 5 694 1037 305 57 23 chr15 14388243 14388683 -89106291 - Lx7 LINE L1 -365 7331 6877 5 694 1698 171 24 61 chr15 14389025 14389355 -89105619 + ORR1A3 LTR MaLR 1 318 -8 5 694 1961 176 84 0 chr15 14389359 14389739 -89105235 + ORR1A3-int LTR MaLR 1 412 -1551 5 694 259 176 20 0 chr15 14389755 14389806 -89105168 + ORR1A3-int LTR MaLR 634 685 -1278 5 694 496 276 46 36 chr15 14389767 14389981 -89104993 + MT2B LTR ERVL 35 259 -342 5 694 319 265 214 0 chr15 14389911 14390009 -89104965 + B1_Mus2 SINE Alu 6 124 -23 5 694 1277 180 103 0 chr15 14390022 14390283 -89104691 + ORR1A3 LTR MaLR 42 329 0 5 694 1334 333 59 6 chr15 14390315 14390844 -89104130 + RMER15-int LTR ERVL 1140 1696 -3303 5 694 189 0 0 0 chr15 14391150 14391171 -89103803 + (TC)n Simple_repeat Simple_repeat 2 22 0 5 694 452 32 16 0 chr15 14391171 14391232 -89103742 + (TA)n Simple_repeat Simple_repeat 2 64 0 5 694 39 84 0 0 chr15 14392169 14392264 -89102710 + AT_rich Low_complexity Low_complexity 1 95 0 5 694 3365 92 50 2 chr15 14392527 14393056 -89101918 - L1_Mus3 LINE L1 0 6638 6135 5 694 238 188 21 0 chr15 14393057 14393105 -89101869 + L1_Mm LINE L1 5253 5301 -582 5 694 753 169 72 6 chr15 14393184 14393351 -89101623 - L1_Mur3 LINE L1 -2435 3445 3268 5 694 393 22 0 0 chr15 14393359 14393405 -89101569 + (A)n Simple_repeat Simple_repeat 1 46 0 5 694 684 238 0 0 chr15 14393405 14393565 -89101409 + L1_Mur3 LINE L1 3444 3603 -2277 5 694 236 316 52 21 chr15 14393652 14393749 -89101225 + MLT1D LTR MaLR 289 388 -117 5 694 483 18 0 0 chr15 14395021 14395077 -89099897 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 694 1120 196 18 5 chr15 14397775 14397996 -89096978 - URR1B DNA MER1_type -1 224 1 6 694 332 303 34 8 chr15 14398294 14398427 -89096547 + MLT1I LTR MaLR 68 205 -243 6 694 180 111 0 0 chr15 14398573 14398600 -89096374 + (TC)n Simple_repeat Simple_repeat 1 27 0 6 694 300 27 0 0 chr15 14398603 14398640 -89096334 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 694 1050 340 30 69 chr15 14398665 14399465 -89095509 + Lx9 LINE L1 6596 7364 -280 6 694 2808 80 71 14 chr15 14399465 14399885 -89095089 + L1_Mus2 LINE L1 6123 6566 0 6 694 534 208 0 0 chr15 14399977 14400126 -89094848 + (TG)n Simple_repeat Simple_repeat 2 150 0 6 694 484 304 24 0 chr15 14400825 14400993 -89093981 - Lx6 LINE L1 -4 7456 7285 6 694 887 146 0 6 chr15 14400995 14401154 -89093820 + (TA)n Simple_repeat Simple_repeat 2 159 0 6 694 331 229 24 12 chr15 14401184 14401268 -89093706 - Lx6 LINE L1 -234 7226 7142 6 694 215 252 23 54 chr15 14401380 14401510 -89093464 + (TTATA)n Simple_repeat Simple_repeat 5 130 0 6 694 227 125 75 28 chr15 14401521 14401628 -89093346 + (TATAA)n Simple_repeat Simple_repeat 5 116 0 6 694 724 306 92 4 chr15 14401629 14401891 -89093083 - Lx6 LINE L1 -332 7128 6844 6 694 872 216 6 0 chr15 14401885 14402066 -89092908 - L1_Mur3 LINE L1 -134 5746 5565 6 694 6779 206 23 76 chr15 14402065 14404001 -89090973 + L1_Mur3 LINE L1 3602 5435 -445 6 694 411 234 117 25 chr15 14403980 14404142 -89090832 - L1_Rod LINE L1 -11 5836 5660 6 694 2200 219 35 69 chr15 14404143 14404398 -89090576 - L1_Mur3 LINE L1 -503 5377 5158 6 694 1868 56 0 0 chr15 14404398 14404629 -89090345 - L1_Mus1 LINE L1 0 6567 6337 6 694 2200 219 35 69 chr15 14404629 14405022 -89089952 - L1_Mur3 LINE L1 -723 5157 4751 6 694 565 10 78 0 chr15 14405032 14405134 -89089840 + (TTTTTG)n Simple_repeat Simple_repeat 2 111 0 6 694 4046 156 50 7 chr15 14405260 14405440 -89089534 + Lx4A LINE L1 5083 5267 -610 6 694 6251 159 44 7 chr15 14405440 14406587 -89088387 + Lx2B LINE L1 5812 7000 0 6 694 6929 166 37 14 chr15 14406587 14408204 -89086770 + Lx4A LINE L1 5268 6923 -135 6 694 411 164 0 0 chr15 14408201 14408274 -89086700 + MusHAL1 LINE L1 1623 1695 -1017 6 694 3095 175 78 19 chr15 14408267 14408526 -89086448 + Lx3C LINE L1 3268 3524 -2353 6 694 315 0 0 0 chr15 14408526 14408561 -89086413 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 694 3095 175 78 19 chr15 14408561 14409030 -89085944 + Lx3C LINE L1 3525 4038 -1839 6 694 575 204 40 75 chr15 14409016 14409217 -89085757 + Lx3C LINE L1 4569 4762 -1115 6 694 4856 128 26 2 chr15 14409208 14410226 -89084748 + Lx3C LINE L1 5361 6409 -567 6 694 2631 42 3 3 chr15 14410226 14410557 -89084417 + IAPEY_LTR LTR ERVK 55 385 0 6 694 7076 94 18 9 chr15 14410557 14411606 -89083368 + IAPEy-int LTR ERVK 1 1058 -6455 6 694 21802 47 3 6 chr15 14411606 14414325 -89080649 + IAPEy-int LTR ERVK 4804 7513 0 6 694 2655 39 3 3 chr15 14414325 14414656 -89080318 + IAPEY_LTR LTR ERVK 55 385 0 6 694 2780 175 63 2 chr15 14414658 14415184 -89079790 + Lx3C LINE L1 6406 6963 -13 6 694 5758 218 49 16 chr15 14415294 14416936 -89078038 + Lx4B LINE L1 5351 7054 -4 6 694 335 261 76 17 chr15 14416962 14417157 -89077817 - L1_Rod LINE L1 -4469 1378 1161 6 86 2956 157 69 5 chr15 14417846 14418410 -89076564 - RLTR17 LTR ERVK 0 692 1 6 695 4002 150 15 3 chr15 14418463 14419140 -89075834 + Lx3A LINE L1 6289 6973 -8 6 695 427 317 46 21 chr15 14419455 14419664 -89075310 - MER3 DNA MER1_type -2456 168 1 6 695 224 103 51 17 chr15 14420078 14420137 -89074837 + (TA)n Simple_repeat Simple_repeat 2 62 0 6 695 338 372 30 10 chr15 14420745 14420946 -89074028 + MERVL-int LTR ERVL 4224 4428 -1057 6 695 356 325 12 48 chr15 14421124 14421292 -89073682 + RSINE1 SINE B4 4 165 0 6 695 1253 113 5 19 chr15 14421405 14421613 -89073361 + L1_Mus1 LINE L1 6361 6565 -2 6 695 240 211 0 59 chr15 14421694 14421795 -89073179 - Lx4B LINE L1 0 7058 6964 6 695 494 174 0 0 chr15 14421795 14421881 -89073093 + Lx4B LINE L1 5853 5938 -1120 6 695 1854 224 165 26 chr15 14421916 14422522 -89072452 + RMER6C LTR ERVK 1 690 0 6 695 338 296 29 101 chr15 14423276 14423415 -89071559 + B1_Mur2 SINE Alu 7 135 -14 6 695 450 0 0 0 chr15 14423657 14423707 -89071267 + (TTA)n Simple_repeat Simple_repeat 2 51 0 6 695 32576 88 6 6 chr15 14423708 14427319 -89067655 - L1Md_F2 LINE L1 -23 6559 2965 6 695 2211 51 0 4 chr15 14427319 14427597 -89067377 + L1Md_F2 LINE L1 6306 6582 0 6 695 32576 84 7 5 chr15 14427597 14429244 -89065730 - L1Md_F2 LINE L1 -2919 2964 1301 6 695 18196 57 1 0 chr15 14429245 14431567 -89063407 + L1Md_F3 LINE L1 3264 5587 -296 6 695 8054 39 8 4 chr15 14431567 14432560 -89062414 + L1Md_F3 LINE L1 5587 6583 -1 6 695 8561 131 76 1 chr15 14432560 14434127 -89060847 + L1_Mus3 LINE L1 4362 6058 -580 6 695 1766 188 174 4 chr15 14434352 14435081 -89059893 - Lx4A LINE L1 -157 6901 6049 6 695 359 335 18 31 chr15 14435076 14435304 -89059670 - L1MA4 LINE L1 -421 5879 5655 6 695 4272 72 5 0 chr15 14435378 14435932 -89059042 - L1_Mus1 LINE L1 -1 6566 6010 6 695 22 0 0 0 chr15 14436461 14436483 -89058491 + AT_rich Low_complexity Low_complexity 1 22 0 6 695 7876 50 3 2 chr15 14436500 14437755 -89057219 - L1Md_F2 LINE L1 0 6582 5329 6 695 3298 50 0 0 chr15 14439837 14440233 -89054741 + MTA_Mm LTR MaLR 1 396 0 6 695 712 324 42 0 chr15 14440346 14440559 -89054415 + Lx8 LINE L1 7104 7325 -148 6 695 410 343 119 7 chr15 14441025 14441338 -89053636 - Lx7 LINE L1 -910 6786 6440 6 695 1044 289 64 32 chr15 14441370 14442051 -89052923 - Lx7 LINE L1 -1604 6092 5389 6 695 441 287 15 30 chr15 14442059 14442192 -89052782 + Lx9 LINE L1 7106 7236 -408 6 695 618 217 150 17 chr15 14442170 14442404 -89052570 + Lx9 LINE L1 7379 7643 -1 6 695 724 290 28 39 chr15 14442636 14442891 -89052083 - Lx8 LINE L1 -135 7338 7087 6 695 336 0 0 21 chr15 14443365 14443412 -89051562 + L1_Mus2 LINE L1 6519 6564 -2 6 695 684 36 0 0 chr15 14443556 14443639 -89051335 + (TC)n Simple_repeat Simple_repeat 1 83 0 6 695 1977 63 4 0 chr15 14443730 14443984 -89050990 - L1Md_T LINE L1 0 6582 6328 6 695 725 35 0 0 chr15 14443984 14444069 -89050905 + L1Md_F2 LINE L1 6250 6334 -248 6 695 7416 75 4 6 chr15 14444086 14445583 -89049391 - L1Md_F2 LINE L1 -9 6573 5079 6 695 21 36 0 0 chr15 14446533 14446561 -89048413 + AT_rich Low_complexity Low_complexity 1 28 0 6 695 21 100 0 0 chr15 14447003 14447073 -89047901 + AT_rich Low_complexity Low_complexity 1 70 0 6 695 705 53 0 0 chr15 14449122 14449216 -89045758 + (CA)n Simple_repeat Simple_repeat 1 94 0 6 695 1348 317 51 32 chr15 14449527 14450192 -89044782 + Lx7 LINE L1 6550 7227 -469 6 695 3100 143 21 15 chr15 14450242 14450775 -89044199 - L1_Mur2 LINE L1 -108 5769 5234 6 695 2521 155 59 105 chr15 14450782 14451116 -89043858 - L1_Mur2 LINE L1 -1162 4715 4386 6 695 1089 74 0 0 chr15 14451116 14451251 -89043723 + B1_Mus2 SINE Alu 1 135 -12 6 695 2521 155 59 105 chr15 14451251 14451542 -89043432 - L1_Mur2 LINE L1 -1492 4385 4119 6 695 2925 177 108 4 chr15 14451538 14451982 -89042992 - L1_Mur2 LINE L1 -4455 1422 950 6 695 486 0 0 0 chr15 14451982 14452036 -89042938 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 695 2925 213 120 3 chr15 14452036 14452391 -89042583 - L1_Mur2 LINE L1 -6137 949 522 6 695 29 47 0 0 chr15 14452903 14452946 -89042028 + AT_rich Low_complexity Low_complexity 1 43 0 6 695 495 325 41 83 chr15 14452983 14453201 -89041773 + B3A SINE B2 2 210 -6 6 695 219 203 0 0 chr15 14453264 14453323 -89041651 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 695 23 68 0 0 chr15 14453346 14453390 -89041584 + AT_rich Low_complexity Low_complexity 1 44 0 6 695 183 100 0 0 chr15 14453962 14453992 -89040982 + (TC)n Simple_repeat Simple_repeat 2 31 0 6 695 1446 41 1 1 chr15 14453994 14454751 -89040223 + (TCTA)n Simple_repeat Simple_repeat 1 757 0 6 695 296 371 73 17 chr15 14454958 14455136 -89039838 + MLT2B5 LTR ERVL 105 292 -309 6 695 182 118 29 0 chr15 14455190 14455224 -89039750 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 695 327 49 0 0 chr15 14455316 14455357 -89039617 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 695 369 322 25 76 chr15 14455377 14455465 -89039509 - RSINE1 SINE B4 -15 150 68 6 695 1304 238 28 78 chr15 14455465 14455634 -89039340 + ORR1C1 LTR MaLR 3 157 -221 6 695 513 32 0 0 chr15 14455634 14455697 -89039277 + (TC)n Simple_repeat Simple_repeat 2 64 0 6 695 1304 238 28 78 chr15 14455697 14455923 -89039051 + ORR1C1 LTR MaLR 158 378 0 6 695 369 322 25 76 chr15 14455923 14455992 -89038982 - RSINE1 SINE B4 -98 67 1 6 695 239 326 152 68 chr15 14456592 14456829 -89038145 - ORR1D-int LTR MaLR -650 930 674 6 695 1226 264 88 35 chr15 14456836 14457212 -89037762 - MTC LTR MaLR 0 421 26 6 695 313 319 37 47 chr15 14457272 14457486 -89037488 - ORR1D-int LTR MaLR -1106 264 53 6 695 636 312 57 117 chr15 14457528 14457913 -89037061 - MTE2a LTR MaLR -4 375 14 6 695 458 281 133 32 chr15 14458126 14458405 -89036569 + MER67C LTR ERV1 224 530 -181 6 695 433 268 65 0 chr15 14458416 14458554 -89036420 + MER67C LTR ERV1 562 708 -3 6 695 24 0 0 0 chr15 14458615 14458639 -89036335 + AT_rich Low_complexity Low_complexity 1 24 0 6 695 369 353 36 6 chr15 14459927 14460095 -89034879 + MLT1A0 LTR MaLR 181 353 -12 6 695 21 0 0 0 chr15 14460309 14460330 -89034644 + AT_rich Low_complexity Low_complexity 1 21 0 6 695 225 167 11 114 chr15 14460844 14460932 -89034042 + (CAAA)n Simple_repeat Simple_repeat 3 81 0 6 695 37779 15 1 8 chr15 14461181 14466421 -89028553 + L1Md_A LINE L1 384 5586 -297 6 695 8660 21 0 0 chr15 14466421 14467415 -89027559 + L1Md_A LINE L1 5587 6580 -2 6 695 958 297 6 82 chr15 14468611 14468967 -89026007 - Lx2B LINE L1 -17 6983 6655 6 695 951 239 38 4 chr15 14468937 14469176 -89025798 - L1_Mur3 LINE L1 -43 5837 5591 6 695 13334 74 13 2 chr15 14469174 14471596 -89023378 - L1Md_F2 LINE L1 -6 6576 4129 6 695 353 412 12 8 chr15 14471597 14471950 -89023024 - Lx7 LINE L1 -211 7262 6908 6 695 592 80 20 0 chr15 14472025 14472125 -89022849 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 6 695 1102 237 4 4 chr15 14472847 14473072 -89021902 - URR1B DNA MER1_type 0 225 1 6 695 283 377 40 46 chr15 14473413 14473588 -89021386 + MER5B DNA MER1_type 4 177 -1 6 695 452 18 0 17 chr15 14473723 14473781 -89021193 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 695 296 345 63 86 chr15 14474446 14474925 -89020049 + MT2A LTR ERVL 13 480 -53 6 695 265 308 53 42 chr15 14475583 14475678 -89019296 + RSINE1 SINE B4 1 96 -69 6 695 1028 145 53 31 chr15 14475757 14475985 -89018989 + Lx2 LINE L1 6764 6996 -1 6 695 279 133 0 0 chr15 14476302 14476347 -89018627 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 695 327 25 0 0 chr15 14477503 14477543 -89017431 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 695 362 128 21 21 chr15 14477570 14477666 -89017308 + (TA)n Simple_repeat Simple_repeat 2 97 0 6 695 198 409 89 26 chr15 14479444 14479635 -89015339 - L2c LINE L2 -173 3214 3012 6 695 23 0 0 0 chr15 14479918 14479941 -89015033 + AT_rich Low_complexity Low_complexity 1 23 0 6 695 558 86 0 0 chr15 14480038 14480119 -89014855 + (CA)n Simple_repeat Simple_repeat 2 82 0 6 695 232 118 0 105 chr15 14480243 14480300 -89014674 - MT2A LTR ERVL -1 532 482 7 695 231 351 83 26 chr15 14480490 14480683 -89014291 - MT2A LTR ERVL -329 204 1 7 695 652 92 28 0 chr15 14480729 14480838 -89014136 + (TCTA)n Simple_repeat Simple_repeat 1 112 0 7 695 7373 60 4 7 chr15 14480863 14481809 -89013165 - L1Md_F2 LINE L1 -5 6577 5635 7 695 1330 258 105 43 chr15 14481876 14482410 -89012564 + RMER2 LTR ERV1 1 567 0 7 695 2387 77 6 6 chr15 14482416 14482858 -89012116 - L1VL4 LINE L1 -2355 1204 760 7 695 4953 147 112 21 chr15 14482891 14484080 -89010894 + Lx LINE L1 5337 6638 -16 7 695 181 57 28 28 chr15 14484080 14484116 -89010858 + (TAA)n Simple_repeat Simple_repeat 1 36 0 7 695 4953 143 142 26 chr15 14484116 14484133 -89010841 + Lx LINE L1 6639 6654 0 7 695 4935 73 0 8 chr15 14484175 14484835 -89010139 + L1Md_F2 LINE L1 5928 6582 0 7 695 243 0 0 0 chr15 14484911 14484938 -89010036 + (A)n Simple_repeat Simple_repeat 1 27 0 7 695 1540 151 0 70 chr15 14484938 14485238 -89009736 + Lx LINE L1 6374 6652 -2 7 695 21 0 0 0 chr15 14485618 14485639 -89009335 + AT_rich Low_complexity Low_complexity 1 21 0 7 695 181 118 0 38 chr15 14487518 14487571 -89007403 + A-rich Low_complexity Low_complexity 2 52 0 7 695 22 35 0 0 chr15 14489299 14489328 -89005646 + AT_rich Low_complexity Low_complexity 1 29 0 7 695 732 202 62 57 chr15 14490679 14490889 -89004085 - L1_Mur2 LINE L1 -349 5528 5318 7 695 429 70 0 0 chr15 14490994 14491051 -89003923 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 695 206 83 56 0 chr15 14491310 14491346 -89003628 + (CATA)n Simple_repeat Simple_repeat 2 39 0 7 695 311 213 40 50 chr15 14491346 14491445 -89003529 + L1M4b LINE L1 1831 1928 -5406 7 695 3781 128 23 20 chr15 14491805 14492411 -89002563 + Lx2 LINE L1 6389 6996 -1 7 695 491 82 14 0 chr15 14494036 14494109 -89000865 + (TA)n Simple_repeat Simple_repeat 2 75 0 7 695 24 0 0 0 chr15 14494659 14494683 -89000291 + AT_rich Low_complexity Low_complexity 1 24 0 7 695 49 32 0 0 chr15 14494743 14494806 -89000168 + AT_rich Low_complexity Low_complexity 1 63 0 7 695 22 0 0 0 chr15 14495104 14495126 -88999848 + AT_rich Low_complexity Low_complexity 1 22 0 7 695 3560 203 58 32 chr15 14495300 14496248 -88998726 - MYSERV6-int LTR ERVK -128 8831 7859 7 695 424 236 48 61 chr15 14496281 14496484 -88998490 - RMER4A LTR ERVK -28 557 254 7 695 328 269 55 49 chr15 14496489 14496653 -88998321 - MYSERV-int LTR ERVK -412 5368 5204 7 695 1464 266 58 72 chr15 14496824 14497517 -88997457 - MYSERV-int LTR ERVK -2118 4432 3750 7 695 6081 222 42 16 chr15 14497940 14498320 -88996654 - Lx5 LINE L1 -44 7006 6615 7 695 2450 26 39 193 chr15 14498320 14498751 -88996223 - RLTR10B2 LTR ERVK 0 365 1 7 695 6081 204 35 11 chr15 14498751 14500000 -88994974 - Lx5 LINE L1 -436 6614 5336 7 695 6301 185 237 39 chr15 14500000 14502024 -88992950 - L1_Mur2 LINE L1 -542 5335 2911 1 695 2197 143 82 15 chr15 14502024 14502428 -88992546 - Lx LINE L1 -4 6650 6220 2 695 3365 128 26 46 chr15 14502428 14502718 -88992256 + Lx LINE L1 5549 5834 -820 3 695 1368 95 11 0 chr15 14502718 14502908 -88992066 + B2_Mm1t SINE B2 2 193 0 4 695 3365 122 30 44 chr15 14502908 14503055 -88991919 + Lx LINE L1 5835 5964 -690 3 695 2594 64 3 6 chr15 14503055 14503401 -88991573 + L1Md_F2 LINE L1 6238 6582 0 5 695 3365 122 30 44 chr15 14503401 14503573 -88991401 + Lx LINE L1 5965 6151 -503 3 695 994 183 15 0 chr15 14503567 14503769 -88991205 - L1_Mur2 LINE L1 -2958 2919 2715 1 695 1888 53 0 0 chr15 14503767 14503994 -88990980 + L1Md_F3 LINE L1 5359 5585 -298 6 695 8256 32 5 6 chr15 14503995 14504993 -88989981 + L1Md_F3 LINE L1 5587 6583 -1 6 695 2539 186 353 3 chr15 14504993 14505899 -88989075 - L1_Mur2 LINE L1 -3163 2714 1492 1 695 310 297 70 64 chr15 14506346 14506533 -88988441 - L1M5 LINE L1 -2931 3215 3028 7 695 265 239 109 9 chr15 14507071 14507181 -88987793 - Lx4B LINE L1 -7 7051 6931 8 695 242 343 12 6 chr15 14507181 14507351 -88987623 - L1M1 LINE L1 -564 5736 5566 9 695 472 312 92 23 chr15 14507390 14507738 -88987236 + L1M2 LINE L1 4714 5085 -1058 1 695 4992 161 76 5 chr15 14507974 14508924 -88986050 - Lx3C LINE L1 -11 6965 5949 1 695 526 311 26 0 chr15 14509014 14509204 -88985770 + Lx6 LINE L1 7258 7452 -8 1 695 2891 247 50 9 chr15 14509200 14509881 -88985093 + Lx6 LINE L1 6748 7456 -4 1 695 5205 98 91 5 chr15 14509938 14510744 -88984230 - L1_Mur1 LINE L1 -121 5765 4891 1 695 33 73 0 0 chr15 14510755 14510823 -88984151 + AT_rich Low_complexity Low_complexity 1 68 0 1 695 1209 141 36 53 chr15 14510831 14511021 -88983953 + Lx3B LINE L1 6471 6667 -306 1 695 3799 48 0 0 chr15 14511021 14511484 -88983490 + L1Md_F2 LINE L1 6108 6570 -12 1 695 1209 141 36 53 chr15 14511484 14511518 -88983456 + Lx3B LINE L1 6668 6691 -282 1 695 6130 142 42 48 chr15 14511632 14512790 -88982184 + Lx2 LINE L1 5847 6997 0 1 695 27 49 0 0 chr15 14512907 14512948 -88982026 + AT_rich Low_complexity Low_complexity 1 41 0 1 695 333 0 0 0 chr15 14512951 14512988 -88981986 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 695 1634 213 122 59 chr15 14513508 14514002 -88980972 - RLTR11A LTR ERVK -3 525 1 2 695 380 365 38 6 chr15 14514431 14514588 -88980386 - B4A SINE B4 -18 274 113 2 695 2370 44 3 3 chr15 14516212 14516509 -88978465 - L1_Mus1 LINE L1 -2 6565 6269 2 695 1385 73 0 0 chr15 14516509 14516686 -88978288 + L1_Mus1 LINE L1 6041 6217 -350 2 695 839 230 23 89 chr15 14516696 14517044 -88977930 + Lx7 LINE L1 7365 7689 -7 2 695 270 56 0 0 chr15 14519062 14519098 -88975876 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 695 280 412 57 5 chr15 14519363 14519575 -88975399 + Tigger7 DNA MER2_type 16 238 -2253 2 695 273 284 72 99 chr15 14519589 14519851 -88975123 + Tigger7 DNA MER2_type 2235 2488 -3 2 695 23 33 0 0 chr15 14520292 14520322 -88974652 + AT_rich Low_complexity Low_complexity 1 30 0 2 695 5463 75 0 1 chr15 14520844 14521577 -88973397 + L1Md_F2 LINE L1 4647 5378 -505 2 695 6545 67 7 1 chr15 14521577 14522435 -88972539 + L1Md_F2 LINE L1 5720 6582 0 2 695 21 57 0 0 chr15 14522644 14522679 -88972295 + AT_rich Low_complexity Low_complexity 1 35 0 2 695 402 21 0 0 chr15 14522759 14522806 -88972168 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 695 1455 259 3 3 chr15 14523271 14523635 -88971339 + Lx6 LINE L1 5400 5763 -117 3 695 1562 245 144 30 chr15 14523647 14524139 -88970835 + Lx6 LINE L1 5928 6475 -985 3 695 561 88 0 0 chr15 14524140 14524220 -88970754 + (TG)n Simple_repeat Simple_repeat 1 80 0 3 695 924 238 73 0 chr15 14524221 14524482 -88970492 + Lx6 LINE L1 7127 7406 -54 3 695 384 22 0 0 chr15 14525900 14525945 -88969029 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 695 207 69 0 0 chr15 14526108 14526137 -88968837 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 695 961 307 20 51 chr15 14526160 14526455 -88968519 + MTD LTR MaLR 1 286 -133 3 695 714 55 0 0 chr15 14526461 14526552 -88968422 + (TG)n Simple_repeat Simple_repeat 2 92 0 3 695 1199 248 143 30 chr15 14527417 14527693 -88967281 + RLTR31_Mm LTR ERVK 1 312 -249 3 695 480 48 0 0 chr15 14527693 14527756 -88967218 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 3 695 1199 248 143 30 chr15 14527756 14527983 -88966991 + RLTR31_Mm LTR ERVK 313 561 0 3 695 1089 210 193 51 chr15 14529053 14529266 -88965708 + RMER10B LTR ERVL 5 257 -141 3 695 639 0 0 0 chr15 14529266 14529337 -88965637 + (TC)n Simple_repeat Simple_repeat 2 72 0 4 695 1089 210 193 51 chr15 14529337 14529439 -88965535 + RMER10B LTR ERVL 258 365 -33 3 695 6978 158 23 29 chr15 14529444 14531682 -88963292 - L1_Mus4 LINE L1 -6 6630 4417 4 695 549 44 0 0 chr15 14531682 14531750 -88963224 + (TTTC)n Simple_repeat Simple_repeat 3 70 0 4 695 1097 225 0 30 chr15 14532134 14532400 -88962574 + L1_Mm LINE L1 4697 4954 -929 4 695 1460 46 0 6 chr15 14532396 14532571 -88962403 + L1_Mus2 LINE L1 6274 6447 -119 4 695 13001 182 15 125 chr15 14532569 14532785 -88962189 - L1VL4 LINE L1 -1459 4427 4233 4 695 219 45 43 22 chr15 14532785 14532831 -88962143 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 4 695 1133 35 21 0 chr15 14532831 14532972 -88962002 - B1_Mm SINE Alu -3 144 1 4 695 13228 139 13 61 chr15 14532972 14533736 -88961238 - L1VL4 LINE L1 -1654 4232 3479 4 695 1639 163 39 15 chr15 14533736 14534072 -88960902 + RLTR9A LTR ERVK 1 344 -24 4 695 13228 139 13 61 chr15 14534072 14536488 -88958486 - L1VL4 LINE L1 -1654 3478 1092 4 695 2511 119 17 19 chr15 14536488 14536898 -88958076 + RLTR9E LTR ERVK 1 409 0 4 695 3662 181 25 25 chr15 14536898 14537420 -88957554 - L1VL4 LINE L1 -5566 1091 571 4 695 285 220 0 0 chr15 14537422 14537472 -88957502 + RMER10B LTR ERVL 349 398 0 3 695 22 70 0 0 chr15 14537481 14537524 -88957450 + AT_rich Low_complexity Low_complexity 1 43 0 5 695 21 57 0 0 chr15 14537548 14537583 -88957391 + AT_rich Low_complexity Low_complexity 1 35 0 5 695 641 308 153 29 chr15 14537626 14538187 -88956787 - L1M4c LINE L1 -4969 1415 785 5 695 274 336 34 48 chr15 14538486 14538633 -88956341 - L1M4c LINE L1 -6037 347 203 5 695 22 0 0 0 chr15 14538848 14538870 -88956104 + AT_rich Low_complexity Low_complexity 1 22 0 5 695 9091 73 30 2 chr15 14539138 14540358 -88954616 + L1Md_F2 LINE L1 4333 5586 -297 5 695 7121 92 3 3 chr15 14540359 14541349 -88953625 + L1Md_F2 LINE L1 5588 6577 -5 5 695 897 348 59 0 chr15 14541447 14541786 -88953188 - MTE2a LTR MaLR -18 361 3 5 695 390 339 52 78 chr15 14541945 14542214 -88952760 + Lx7 LINE L1 6423 6684 -1012 5 695 377 180 0 11 chr15 14542632 14542722 -88952252 + CT-rich Low_complexity Low_complexity 2 90 0 5 695 688 316 32 19 chr15 14544969 14545279 -88949695 - Lx8 LINE L1 -118 7355 7042 5 695 258 294 113 41 chr15 14545398 14545593 -88949381 + L1MB3 LINE L1 5281 5489 -679 5 695 378 256 54 0 chr15 14545890 14546019 -88948955 + L1MB3 LINE L1 5805 5940 -243 5 695 324 322 32 15 chr15 14546824 14546989 -88947985 + RMER20B LTR ERVK 1 161 -355 6 695 312 200 0 0 chr15 14547858 14547913 -88947061 - ORR1B1 LTR MaLR 0 394 340 6 695 6724 37 0 1 chr15 14547913 14548717 -88946257 - L1Md_T LINE L1 -2 6580 5778 6 86 1708 214 30 14 chr15 14548717 14549106 -88945868 - ORR1B1 LTR MaLR -3 375 1 6 696 5092 207 64 54 chr15 14549106 14550411 -88944563 - ORR1B1-int LTR MaLR 0 1509 192 6 696 3934 133 57 8 chr15 14550429 14551079 -88943895 - Lx2A1 LINE L1 -1 7007 6326 6 696 4461 130 39 32 chr15 14551782 14552637 -88942337 - Lx2A1 LINE L1 -662 6346 5492 6 696 608 240 65 7 chr15 14552638 14552793 -88942181 - ORR1B1-int LTR MaLR -1336 173 10 6 696 1444 202 140 23 chr15 14552803 14553153 -88941821 - ORR1B1 LTR MaLR 0 394 4 6 696 462 171 67 22 chr15 14553357 14553447 -88941527 - B1_Mus1 SINE Alu -54 94 1 6 696 336 188 0 68 chr15 14553390 14553464 -88941510 - B4 SINE B4 -151 141 73 6 696 561 282 63 77 chr15 14553467 14553736 -88941238 - L1MA8 LINE L1 -274 5915 5680 6 696 1379 132 185 114 chr15 14553736 14554103 -88940871 + RLTR9C LTR ERVK 1 393 0 6 696 561 318 56 81 chr15 14554103 14554364 -88940610 - L1MA8 LINE L1 -631 5681 5416 6 696 2702 173 37 6 chr15 14554409 14554898 -88940076 - Lx LINE L1 0 6654 6151 6 696 3596 86 11 5 chr15 14555755 14556256 -88938718 - RLTR1C LTR ERV1 0 507 1 7 696 574 77 0 0 chr15 14556257 14556335 -88938639 - RLTR1B-int LTR ERV1 -1 3298 3221 7 696 1685 94 0 0 chr15 14556374 14556598 -88938376 - MMVL30-int LTR ERV1 -77 3621 3398 7 696 1235 120 11 0 chr15 14557504 14557688 -88937286 + B2_Mm1t SINE B2 2 187 -6 7 696 217 270 32 0 chr15 14557781 14557844 -88937130 + ID_B1 SINE B4 90 154 -70 7 696 294 129 0 0 chr15 14557845 14557907 -88937067 + (T)n Simple_repeat Simple_repeat 1 62 0 7 696 1048 83 14 0 chr15 14557928 14558073 -88936901 + B1_Mus2 SINE Alu 1 147 0 7 696 655 118 0 35 chr15 14558073 14558214 -88936760 + A-rich Low_complexity Low_complexity 5 140 0 7 696 609 330 72 68 chr15 14558422 14558922 -88936052 - LTR55 LTR ERV -18 530 29 7 696 230 306 14 0 chr15 14558982 14559054 -88935920 + (TATG)n Simple_repeat Simple_repeat 2 74 0 7 696 237 33 0 0 chr15 14560331 14560361 -88934613 + (TTA)n Simple_repeat Simple_repeat 1 30 0 7 696 29 0 0 0 chr15 14560448 14560477 -88934497 + AT_rich Low_complexity Low_complexity 1 29 0 8 696 988 269 8 16 chr15 14560849 14561095 -88933879 + RLTR18B LTR ERVK 7 250 -262 8 696 944 274 31 8 chr15 14561096 14561353 -88933621 + RLTR18B LTR ERVK 202 464 -48 8 696 183 80 0 0 chr15 14561353 14561378 -88933596 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 8 696 312 250 17 59 chr15 14561378 14561497 -88933477 - Lx4B LINE L1 -16 7042 6929 8 696 252 0 0 0 chr15 14561596 14561624 -88933350 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 8 696 8464 172 62 93 chr15 14561653 14563679 -88931295 + ORR1A4-int LTR MaLR 1 1963 0 8 696 1572 174 31 25 chr15 14563679 14564003 -88930971 + ORR1A4 LTR MaLR 1 326 -3 8 696 1515 212 27 15 chr15 14564014 14564349 -88930625 - L1_Mur2 LINE L1 -681 5196 4858 8 696 3631 197 39 25 chr15 14564343 14565239 -88929735 - L1_Mur2 LINE L1 -3651 2226 1318 8 696 1144 226 65 7 chr15 14565240 14565672 -88929302 - L1_Mur2 LINE L1 -4483 1397 948 8 696 468 179 32 0 chr15 14565672 14565767 -88929207 + RLTR12A LTR ERVK 101 198 -370 8 696 472 311 10 86 chr15 14566030 14566227 -88928747 + RMER30 DNA MER1_type 20 201 -1 8 696 236 77 26 0 chr15 14566818 14566857 -88928117 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 696 435 366 17 13 chr15 14567014 14567244 -88927730 - L1M4 LINE L1 -5936 606 376 9 696 393 260 132 0 chr15 14569052 14569256 -88925718 - Lx9 LINE L1 -16 7628 7398 9 696 1177 299 54 59 chr15 14570807 14571216 -88923758 + MTD LTR MaLR 1 407 -12 9 696 561 129 0 0 chr15 14571670 14571763 -88923211 + (TG)n Simple_repeat Simple_repeat 2 94 0 9 696 21 0 0 0 chr15 14572566 14572587 -88922387 + AT_rich Low_complexity Low_complexity 1 21 0 9 696 333 0 0 0 chr15 14573324 14573361 -88921613 + (CA)n Simple_repeat Simple_repeat 2 38 0 9 696 1169 290 12 39 chr15 14573490 14573801 -88921173 - MTD LTR MaLR 0 419 110 9 696 1006 109 0 0 chr15 14573801 14573938 -88921036 + B1_Mm SINE Alu 1 137 -10 9 696 240 35 0 0 chr15 14573938 14573967 -88921007 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9 696 828 0 0 0 chr15 14573969 14574061 -88920913 + (GAA)n Simple_repeat Simple_repeat 2 93 0 9 696 1169 290 12 39 chr15 14574061 14574176 -88920798 - MTD LTR MaLR -310 109 2 9 696 357 180 0 0 chr15 14574557 14574618 -88920356 + RLTR40 LTR ERVK 516 576 -241 1 696 270 0 0 0 chr15 14574619 14574649 -88920325 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 696 2616 177 14 137 chr15 14574649 14575435 -88919539 - RMER6C LTR ERVK 0 690 2 1 696 255 122 0 0 chr15 14575437 14575486 -88919488 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 696 518 245 42 36 chr15 14575518 14575683 -88919291 + RLTR40 LTR ERVK 647 812 -5 1 696 255 31 0 0 chr15 14577011 14577043 -88917931 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 696 450 367 28 11 chr15 14577411 14577590 -88917384 + B3A SINE B2 2 183 -15 1 696 261 163 0 0 chr15 14577590 14577639 -88917335 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 696 585 0 0 0 chr15 14577983 14578048 -88916926 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 696 832 170 105 0 chr15 14578048 14578219 -88916755 - Lx LINE L1 -10 6644 6456 1 696 741 208 28 0 chr15 14578626 14578770 -88916204 - B1_Mur3 SINE Alu 0 149 2 1 696 221 57 0 28 chr15 14581128 14581164 -88913810 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 696 189 0 0 0 chr15 14581484 14581505 -88913469 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 696 604 233 87 15 chr15 14582011 14582207 -88912767 + Lx5 LINE L1 6841 7050 0 1 696 948 146 10 10 chr15 14582217 14582514 -88912460 + GA-rich Low_complexity Low_complexity 1 296 0 1 696 450 0 0 0 chr15 14582659 14582709 -88912265 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 696 253 315 73 44 chr15 14582799 14582935 -88912039 + MLT1A1 LTR MaLR 263 402 -6 1 696 282 279 172 38 chr15 14583403 14583769 -88911205 + L1MCa LINE L1 1415 1829 -4679 1 696 331 265 141 58 chr15 14584146 14584302 -88910672 - HAL1-3A_ME LINE L1 -727 2131 1963 1 696 976 205 0 9 chr15 14584528 14584740 -88910234 - Lx2 LINE L1 0 6997 6788 1 696 1931 87 0 8 chr15 14584980 14585246 -88909728 - L1_Mus4 LINE L1 -135 6501 6238 1 696 316 293 0 0 chr15 14585266 14585348 -88909626 + GA-rich Low_complexity Low_complexity 1 82 0 1 696 22 56 0 0 chr15 14586371 14586407 -88908567 + AT_rich Low_complexity Low_complexity 1 36 0 1 696 340 361 39 27 chr15 14587569 14587778 -88907196 - MER74C LTR ERVL -219 339 48 1 696 502 325 80 50 chr15 14587839 14588140 -88906834 + RMER15-int LTR ERVL 1662 1971 -3028 1 696 531 273 202 4 chr15 14588332 14588596 -88906378 + RMER15-int LTR ERVL 2074 2389 -2610 1 696 2178 270 128 31 chr15 14588571 14589448 -88905526 + RMER15-int LTR ERVL 4012 4973 -26 1 696 414 194 48 10 chr15 14589448 14589552 -88905422 + RMER15 LTR ERVL 1 108 -467 1 696 1319 78 88 0 chr15 14589561 14589754 -88905220 - ORR1A2 LTR MaLR 0 327 118 1 696 4226 196 25 52 chr15 14589754 14590859 -88904115 - MusHAL1 LINE L1 -502 2210 1135 1 696 6102 222 53 106 chr15 14590850 14591692 -88903282 + Lx2B LINE L1 3860 4674 -1206 1 696 1071 83 7 0 chr15 14591692 14591837 -88903137 + B1_Mm SINE Alu 2 147 0 1 696 6102 222 53 106 chr15 14591837 14592678 -88902296 + Lx2B LINE L1 4675 5426 -454 1 696 1955 63 0 0 chr15 14592678 14592931 -88902043 - L1Md_F2 LINE L1 0 6582 6330 1 696 1992 209 16 23 chr15 14592929 14593360 -88901614 + Lx4A LINE L1 6628 7055 -3 1 696 6102 234 63 38 chr15 14593360 14594851 -88900123 + Lx2B LINE L1 5427 6997 -3 1 696 1096 88 0 0 chr15 14595673 14595820 -88899154 + B1_Mus1 SINE Alu 2 148 0 1 696 1748 192 42 116 chr15 14596234 14596788 -88898186 - Lx4B LINE L1 -1 7057 6545 1 696 480 304 112 45 chr15 14597033 14597212 -88897762 - B3A SINE B2 -2 196 6 1 696 195 42 0 0 chr15 14597554 14597578 -88897396 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 696 292 384 7 55 chr15 14598435 14598581 -88896393 - ID_B1 SINE B4 -4 220 82 1 696 315 0 0 0 chr15 14598664 14598699 -88896275 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 696 333 320 192 17 chr15 14599211 14599444 -88895530 + B4A SINE B4 1 274 -18 1 696 760 289 89 72 chr15 14599810 14600269 -88894705 + RLTR12B LTR ERVK 47 513 -15 1 696 291 229 0 16 chr15 14601213 14601275 -88893699 - RMER1C Other Other -136 1206 1146 1 696 246 32 0 0 chr15 14601401 14601432 -88893542 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 696 243 0 0 0 chr15 14601965 14601992 -88892982 + (A)n Simple_repeat Simple_repeat 1 27 0 1 696 751 97 74 20 chr15 14602163 14602311 -88892663 - Lx LINE L1 -9 6645 6490 1 696 3308 42 0 0 chr15 14603434 14603835 -88891139 - L1Md_T LINE L1 0 6582 6182 1 696 548 274 57 123 chr15 14604289 14604370 -88890604 + L1_Mur3 LINE L1 5153 5236 -644 1 696 2156 104 6 3 chr15 14604370 14604689 -88890285 + L1_Mus3 LINE L1 6314 6633 -5 1 696 548 274 57 123 chr15 14604689 14604839 -88890135 + L1_Mur3 LINE L1 5237 5396 -484 1 696 3668 182 17 8 chr15 14604839 14605542 -88889432 + Lx LINE L1 5941 6649 -5 1 696 548 278 61 123 chr15 14605542 14605880 -88889094 + L1_Mur3 LINE L1 5371 5659 -188 1 696 1122 204 173 43 chr15 14605880 14606203 -88888771 + ORR1B2 LTR MaLR 1 365 -2 1 696 1494 253 77 8 chr15 14606217 14606579 -88888395 + ORR1B2-int LTR MaLR 8 395 -1114 1 696 1946 175 22 144 chr15 14606579 14607205 -88887769 - RMER6C LTR ERVK 0 690 141 1 696 2233 269 106 57 chr15 14607262 14607349 -88887625 + ORR1B2-int LTR MaLR 407 496 -874 1 696 3060 41 0 5 chr15 14607349 14607716 -88887258 - RLTR10B2 LTR ERVK 0 365 1 1 696 2233 269 106 57 chr15 14607716 14608522 -88886452 + ORR1B2-int LTR MaLR 497 1344 -26 1 696 2314 287 71 15 chr15 14608526 14609369 -88885605 + Lx7 LINE L1 6144 7033 -663 1 696 827 293 59 36 chr15 14610024 14610329 -88884645 - Lx8 LINE L1 -403 7070 6759 1 696 264 390 92 5 chr15 14610391 14610597 -88884377 + MTD LTR MaLR 36 259 -160 1 696 630 266 94 149 chr15 14612067 14612487 -88882487 + MTE2a LTR MaLR 17 405 -14 1 696 825 276 73 70 chr15 14612644 14612960 -88882014 - MTEb LTR MaLR -12 367 51 1 696 225 0 0 0 chr15 14613631 14613656 -88881318 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 696 1200 113 3 0 chr15 14613699 14613983 -88880991 + (TTTA)n Simple_repeat Simple_repeat 1 284 0 1 696 3006 226 65 5 chr15 14614036 14614693 -88880281 + Lx5 LINE L1 6348 7044 -6 1 696 27 49 0 0 chr15 14614891 14614932 -88880042 + AT_rich Low_complexity Low_complexity 1 41 0 1 696 21 0 0 0 chr15 14615749 14615770 -88879204 + AT_rich Low_complexity Low_complexity 1 21 0 1 696 459 289 138 29 chr15 14616296 14616535 -88878439 - MLT1C LTR MaLR -44 423 159 1 696 3815 153 24 0 chr15 14616742 14617370 -88877604 + Lx LINE L1 6010 6652 -2 1 696 22 0 0 0 chr15 14617434 14617456 -88877518 + AT_rich Low_complexity Low_complexity 1 22 0 1 696 357 62 0 0 chr15 14617464 14617512 -88877462 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 696 546 293 0 33 chr15 14617528 14617648 -88877326 - RSINE1 SINE B4 -38 127 12 1 696 21 0 0 0 chr15 14617818 14617839 -88877135 + AT_rich Low_complexity Low_complexity 1 21 0 1 696 25 75 0 0 chr15 14618208 14618261 -88876713 + AT_rich Low_complexity Low_complexity 1 53 0 1 696 2376 159 33 2 chr15 14619907 14620330 -88874644 + L1_Mm LINE L1 4433 4868 -1015 1 696 1881 79 14 33 chr15 14620343 14620618 -88874356 - L1_Mus1 LINE L1 -1 6566 6297 1 696 1021 33 0 0 chr15 14620618 14620738 -88874236 + L1Md_F2 LINE L1 5743 5862 -720 1 696 362 57 0 19 chr15 14621059 14621113 -88873861 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 1 696 702 181 34 32 chr15 14621177 14621334 -88873640 - ORR1C2 LTR MaLR -236 148 1 1 696 22 0 0 0 chr15 14621427 14621449 -88873525 + AT_rich Low_complexity Low_complexity 1 22 0 1 696 621 40 0 0 chr15 14621455 14621531 -88873443 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 696 21 0 0 0 chr15 14621690 14621711 -88873263 + AT_rich Low_complexity Low_complexity 1 21 0 1 696 199 54 0 51 chr15 14622246 14622285 -88872689 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 1 696 1967 113 40 52 chr15 14622654 14622981 -88871993 + ORR1A2 LTR MaLR 5 327 0 1 696 7289 99 7 10 chr15 14623117 14624171 -88870803 - L1_Mus3 LINE L1 -2 6636 5587 1 696 1867 165 40 40 chr15 14624187 14624584 -88870390 + RLTR44D LTR ERVK 53 449 0 1 696 1076 150 5 49 chr15 14624584 14624787 -88870187 + RLTR44-int LTR ERVK 1 194 -2618 1 696 608 171 25 32 chr15 14624807 14625006 -88869968 + RLTR44-int LTR ERVK 803 981 -1831 1 696 2704 92 3 0 chr15 14625186 14625545 -88869429 + RLTR44-int LTR ERVK 973 1332 -1480 1 696 528 287 37 67 chr15 14625624 14625893 -88869081 + IAPEz-int LTR ERVK 3423 3683 -2798 1 696 4577 55 2 11 chr15 14625904 14626478 -88868496 + RLTR44-int LTR ERVK 2244 2812 0 1 696 2208 117 168 5 chr15 14626478 14626890 -88868084 + RLTR44D LTR ERVK 1 479 -7 1 696 591 114 20 20 chr15 14626900 14626990 -88867984 - L1_Mur1 LINE L1 -296 5590 5499 1 696 2840 105 5 5 chr15 14626990 14627393 -88867581 - RLTR9D LTR ERVK 0 403 1 1 696 300 140 0 50 chr15 14627406 14627466 -88867508 - ETnERV2-int LTR ERVK -19 7387 7331 1 696 3447 203 30 49 chr15 14627682 14628042 -88866932 - ETnERV2-int LTR ERVK -1687 3157 3100 1 696 2837 55 3 3 chr15 14628042 14628405 -88866569 + L1Md_F2 LINE L1 6220 6582 0 1 696 6527 175 59 24 chr15 14628405 14630581 -88864393 - ETnERV2-int LTR ERVK -3308 4098 1836 1 696 858 62 0 0 chr15 14630581 14630693 -88864281 + B1_Mm SINE Alu 27 138 -9 1 696 338 0 24 0 chr15 14630693 14630735 -88864239 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 696 249 128 0 0 chr15 14631270 14631317 -88863657 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 1 696 27 29 0 0 chr15 14631641 14631675 -88863299 + AT_rich Low_complexity Low_complexity 1 34 0 1 696 1241 98 49 0 chr15 14632222 14632405 -88862569 - B2_Mm2 SINE B2 -2 193 2 1 696 1204 48 0 0 chr15 14632639 14632786 -88862188 - B1_Mus2 SINE Alu 0 147 1 1 696 303 177 81 0 chr15 14632985 14633047 -88861927 - HAL1-3A_ME LINE L1 -816 2042 1976 1 696 384 150 0 0 chr15 14633048 14633128 -88861846 + (TG)n Simple_repeat Simple_repeat 1 80 0 1 696 381 369 0 0 chr15 14633486 14633627 -88861347 + B1F SINE Alu 1 141 -8 1 696 481 301 125 25 chr15 14633874 14634153 -88860821 + Lx8 LINE L1 6924 7230 -243 1 696 3460 167 13 107 chr15 14634154 14635007 -88859967 - L1_Mur2 LINE L1 -949 4928 4156 1 696 2375 148 3 5 chr15 14634989 14635363 -88859611 + Lx2 LINE L1 6226 6598 -399 1 696 922 155 39 6 chr15 14635363 14635545 -88859429 + Lx2 LINE L1 6810 6997 0 1 696 1200 304 71 38 chr15 14635574 14636252 -88858722 - Lx9 LINE L1 0 7644 6945 1 696 2731 24 0 55 chr15 14636366 14636712 -88858262 - IAPLTR2b LTR ERVK 0 327 1 1 696 286 330 38 0 chr15 14636712 14636818 -88858156 - Lx9 LINE L1 -791 6853 6744 1 696 1054 135 6 0 chr15 14637504 14637674 -88857300 + Lx2 LINE L1 6827 6997 0 1 696 6005 51 1 0 chr15 14637710 14638452 -88856522 + L1Md_T LINE L1 5840 6582 0 1 696 23 0 0 0 chr15 14638506 14638529 -88856445 + AT_rich Low_complexity Low_complexity 1 23 0 1 696 441 0 0 0 chr15 14638530 14638579 -88856395 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 2 696 279 349 76 51 chr15 14640751 14640908 -88854066 + MLT1E1A LTR MaLR 137 297 -383 2 696 270 37 17 69 chr15 14641003 14641061 -88853913 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 2 696 28 86 0 0 chr15 14641558 14641628 -88853346 + AT_rich Low_complexity Low_complexity 1 70 0 2 696 315 150 0 0 chr15 14641970 14642030 -88852944 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 696 582 248 24 0 chr15 14643408 14643533 -88851441 + RLTR11A LTR ERVK 1 128 -399 2 696 3376 58 23 0 chr15 14643535 14643966 -88851008 - L1_Mus1 LINE L1 0 6567 6127 2 696 284 73 0 0 chr15 14643966 14644007 -88850967 + L1_Mus1 LINE L1 6094 6134 -433 2 696 1901 201 41 7 chr15 14644007 14644422 -88850552 + RLTR11A LTR ERVK 100 528 0 2 696 25 0 0 0 chr15 14644422 14644447 -88850527 + AT_rich Low_complexity Low_complexity 1 25 0 2 696 519 311 93 54 chr15 14644463 14644713 -88850261 + B4A SINE B4 3 265 -27 2 696 1122 100 0 0 chr15 14644713 14644893 -88850081 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 696 519 311 93 54 chr15 14644893 14644921 -88850053 + B4A SINE B4 266 292 0 2 696 266 226 9 0 chr15 14644939 14645045 -88849929 + (CA)n Simple_repeat Simple_repeat 2 108 0 2 696 33 25 0 0 chr15 14645567 14645607 -88849367 + AT_rich Low_complexity Low_complexity 1 40 0 2 696 1467 249 63 23 chr15 14646405 14646848 -88848126 + Lx7 LINE L1 5331 5791 -89 2 696 1325 202 21 52 chr15 14646861 14647148 -88847826 - Lx5 LINE L1 -642 6408 6131 2 696 1936 176 3 0 chr15 14647230 14647566 -88847408 - Lx5 LINE L1 0 5877 5541 2 696 2900 231 29 14 chr15 14647566 14648197 -88846777 + Lx5 LINE L1 6408 7047 -3 2 696 207 88 0 0 chr15 14648243 14648277 -88846697 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 2 696 803 20 10 0 chr15 14648522 14648623 -88846351 + (TG)n Simple_repeat Simple_repeat 1 102 0 2 696 311 227 0 13 chr15 14648623 14648699 -88846275 + Lx7 LINE L1 6190 6264 -1432 2 696 256 195 135 87 chr15 14648723 14648953 -88846021 + Lx7 LINE L1 7319 7559 -137 2 696 1011 230 14 0 chr15 14648955 14649177 -88845797 - URR1A DNA MER1_type -1 225 1 2 696 3545 225 6 14 chr15 14649183 14650032 -88844942 + L1_Mur3 LINE L1 4509 5350 -530 2 696 540 215 12 87 chr15 14650061 14650234 -88844740 + Lx3B LINE L1 6810 6969 -4 2 696 1142 112 6 0 chr15 14650261 14650439 -88844535 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 2 696 654 13 0 0 chr15 14650441 14650516 -88844458 + (GAAA)n Simple_repeat Simple_repeat 4 78 0 2 696 354 165 0 25 chr15 14650529 14650610 -88844364 + Lx7 LINE L1 7602 7680 -16 2 696 21 72 0 28 chr15 14651142 14651174 -88843800 + AT_rich Low_complexity Low_complexity 1 32 0 2 696 1983 169 22 49 chr15 14651174 14651579 -88843395 + Lx3B LINE L1 6577 6970 -3 2 696 21 72 0 28 chr15 14651579 14651617 -88843357 + AT_rich Low_complexity Low_complexity 1 37 0 2 696 365 0 0 22 chr15 14651759 14651805 -88843169 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 2 696 34970 16 0 0 chr15 14651855 14656607 -88838367 - L1Md_A LINE L1 -2 6580 1828 2 696 2553 90 121 16 chr15 14656607 14657037 -88837937 + IAPLTR2_Mm LTR ERVK 1 475 0 2 696 3405 62 5 12 chr15 14657047 14657755 -88837219 + IAPEz-int LTR ERVK 35 662 -5819 2 696 442 66 0 32 chr15 14657755 14657818 -88837156 + IAPEz-int LTR ERVK 1359 1419 -5062 2 696 1826 115 4 4 chr15 14657807 14658069 -88836905 + IAPEz-int LTR ERVK 2236 2497 -5183 2 696 907 81 24 0 chr15 14658066 14658189 -88836785 + IAPEz-int LTR ERVK 4785 4910 -2770 2 696 25973 17 7 0 chr15 14658189 14661127 -88833847 + IAPEz-int LTR ERVK 3525 6481 0 2 696 2567 92 119 14 chr15 14661127 14661557 -88833417 + IAPLTR2_Mm LTR ERVK 1 475 0 2 696 9192 20 8 23 chr15 14661557 14663235 -88831739 - L1Md_A LINE L1 -4050 1833 184 2 696 31 82 0 0 chr15 14663383 14663456 -88831518 + AT_rich Low_complexity Low_complexity 1 73 0 2 696 291 250 177 0 chr15 14663791 14663887 -88831087 - Lx4B LINE L1 -80 6978 6866 2 696 4032 210 24 10 chr15 14663916 14664787 -88830187 - Lx4B LINE L1 -303 6755 5873 2 696 1242 100 0 0 chr15 14664992 14665172 -88829802 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 696 1315 233 43 44 chr15 14665196 14665572 -88829402 - RMER1C Other Other -176 1166 647 2 696 336 127 0 0 chr15 14666786 14666841 -88828133 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 2 696 319 275 24 108 chr15 14667016 14667069 -88827905 - L1_Mur3 LINE L1 -551 5329 5287 2 696 1335 171 33 0 chr15 14667069 14667314 -88827660 - Lx2 LINE L1 0 6997 6745 2 696 319 275 24 108 chr15 14667314 14667472 -88827502 - L1_Mur3 LINE L1 -594 5286 5136 2 696 225 94 0 0 chr15 14667500 14667532 -88827442 + (T)n Simple_repeat Simple_repeat 1 32 0 2 696 25 0 0 0 chr15 14667647 14667672 -88827302 + AT_rich Low_complexity Low_complexity 1 25 0 2 696 2895 174 13 9 chr15 14667672 14668200 -88826774 - Lx4A LINE L1 -9 7049 6520 2 696 3314 48 23 103 chr15 14668201 14668717 -88826257 - IAPLTR2_Mm LTR ERVK 0 475 1 2 696 6146 68 12 19 chr15 14668719 14669552 -88825422 - IAPEz-int LTR ERVK -2 6479 5653 2 696 2657 70 0 3 chr15 14669547 14669890 -88825084 - IAPEz-int LTR ERVK -4781 1700 1359 2 696 3366 60 22 16 chr15 14669890 14670456 -88824518 - IAPEz-int LTR ERVK -5819 662 168 2 696 237 250 0 0 chr15 14670456 14670500 -88824474 - RLTR27 LTR ERVK -34 275 232 2 696 234 295 49 0 chr15 14670537 14670598 -88824376 - RLTR27 LTR ERVK -34 275 212 2 696 496 69 0 227 chr15 14670598 14670730 -88824244 - IAPEz-int LTR ERVK -6371 110 9 2 696 2985 39 155 5 chr15 14670731 14671144 -88823830 - IAPLTR2_Mm LTR ERVK 0 475 1 2 696 6472 219 53 37 chr15 14671198 14673465 -88821509 - L1_Mur3 LINE L1 -2602 3278 979 2 696 747 350 48 0 chr15 14673472 14673829 -88821145 - L1_Mur3 LINE L1 -7051 677 304 2 696 242 282 104 54 chr15 14673954 14674194 -88820780 - L1M5 LINE L1 -1227 4919 4668 2 696 1003 304 81 14 chr15 14674969 14675339 -88819635 - RMER5 LTR ERV1 -16 518 124 2 696 206 289 0 30 chr15 14675342 14675442 -88819532 + T-rich Low_complexity Low_complexity 2 98 0 2 696 363 269 0 44 chr15 14675713 14675826 -88819148 - RMER5 LTR ERV1 -425 109 2 2 696 989 187 0 0 chr15 14675901 14676088 -88818886 - RMER6C LTR ERVK 0 690 504 2 696 657 344 19 60 chr15 14676762 14677127 -88817847 - ORR1E LTR MaLR -7 352 3 2 696 243 0 0 0 chr15 14678331 14678358 -88816616 + (T)n Simple_repeat Simple_repeat 1 27 0 2 696 1110 59 0 0 chr15 14678376 14678511 -88816463 - B1_Mus1 SINE Alu -9 139 5 2 696 1059 252 38 81 chr15 14678926 14679566 -88815408 + RLTR11A LTR ERVK 1 523 -5 2 10 781 243 71 5 chr15 14679867 14680087 -88814887 + ORR1D1 LTR MaLR 144 376 -2 2 697 345 283 63 7 chr15 14680106 14680251 -88814723 - L1_Mur3 LINE L1 -238 5642 5491 2 697 439 17 33 0 chr15 14680319 14680379 -88814595 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 2 697 243 88 0 0 chr15 14680393 14680427 -88814547 + (CAGA)n Simple_repeat Simple_repeat 2 35 0 2 697 369 109 0 0 chr15 14680450 14680505 -88814469 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 697 239 351 0 0 chr15 14680918 14680992 -88813982 + Lx7 LINE L1 6588 6661 -1035 2 697 2619 90 32 10 chr15 14681047 14681243 -88813731 - BGLII LTR ERVK -8 413 209 2 697 573 55 0 0 chr15 14681243 14681316 -88813658 + (TC)n Simple_repeat Simple_repeat 2 74 0 2 697 2619 90 32 10 chr15 14681316 14681523 -88813451 - BGLII LTR ERVK -213 208 1 2 697 638 331 79 40 chr15 14681631 14682034 -88812940 + Lx7 LINE L1 6722 7140 -556 2 697 221 28 83 0 chr15 14682435 14682471 -88812503 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2 697 260 304 31 52 chr15 14683910 14684007 -88810967 + RSINE1 SINE B4 62 156 -9 2 697 25 0 0 0 chr15 14684032 14684057 -88810917 + AT_rich Low_complexity Low_complexity 1 25 0 2 697 3067 59 23 0 chr15 14684366 14684753 -88810221 - MTA_Mm LTR MaLR 0 396 1 2 697 24 32 0 0 chr15 14685317 14685348 -88809626 + AT_rich Low_complexity Low_complexity 1 31 0 2 697 345 75 0 0 chr15 14686015 14686068 -88808906 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 697 351 0 0 0 chr15 14686153 14686192 -88808782 + (TA)n Simple_repeat Simple_repeat 2 40 0 2 697 267 272 43 11 chr15 14686658 14686751 -88808223 - L1MC3 LINE L1 -251 7534 7439 2 697 279 244 32 13 chr15 14686835 14686989 -88807985 + (TA)n Simple_repeat Simple_repeat 2 158 0 2 697 207 0 0 0 chr15 14687113 14687136 -88807838 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2 697 1735 72 80 0 chr15 14687285 14687522 -88807452 - L1_Mus1 LINE L1 0 6567 6312 2 697 2378 196 140 19 chr15 14687545 14688159 -88806815 - RMER6C LTR ERVK -2 688 1 2 697 3491 71 0 17 chr15 14689216 14689676 -88805298 - L1_Mus1 LINE L1 0 6567 6116 2 697 7118 140 25 24 chr15 14689728 14691707 -88803267 - Lx3B LINE L1 -145 6828 4857 2 697 682 258 61 15 chr15 14691707 14691904 -88803070 + ORR1C2 LTR MaLR 171 376 -8 2 697 2744 42 95 6 chr15 14693963 14694321 -88800653 + RLTR10 LTR ERVK 1 390 0 2 697 1299 89 11 0 chr15 14694321 14694501 -88800473 + RLTR10-int LTR ERVK 1 182 -7399 2 697 279 0 0 0 chr15 14694582 14694613 -88800361 + (A)n Simple_repeat Simple_repeat 1 31 0 2 697 407 194 130 0 chr15 14694613 14694721 -88800253 + RLTR10A LTR ERVK 290 411 0 2 697 2684 55 66 0 chr15 14694721 14695174 -88799800 + RLTR10-int LTR ERVK 302 857 -1130 2 697 362 321 19 19 chr15 14695294 14695453 -88799521 + IAP-d-int LTR ERVK 3536 3694 -2848 2 697 442 286 12 12 chr15 14695524 14695697 -88799277 + RLTR10-int LTR ERVK 1422 1594 -5987 2 697 8274 39 5 8 chr15 14695774 14696774 -88798200 + RLTR10-int LTR ERVK 990 1986 -1 2 697 3012 52 5 42 chr15 14696774 14697179 -88797795 + RLTR10 LTR ERVK 1 390 0 2 697 24 67 0 0 chr15 14697324 14697369 -88797605 + AT_rich Low_complexity Low_complexity 1 45 0 2 697 3602 185 19 15 chr15 14697918 14698598 -88796376 - Lx4A LINE L1 -7 7051 6369 2 697 1162 183 43 0 chr15 14698602 14698832 -88796142 + L1_Mur2 LINE L1 43 282 -6430 2 697 568 306 84 39 chr15 14699221 14699683 -88795291 + Lx9 LINE L1 5309 5791 -56 2 697 195 129 0 0 chr15 14699880 14699911 -88795063 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 697 922 125 0 0 chr15 14700032 14700168 -88794806 - B1_Mus1 SINE Alu -12 136 1 2 697 406 350 113 18 chr15 14700192 14700518 -88794456 + Lx9 LINE L1 6452 6808 -836 2 697 207 277 0 0 chr15 14700529 14700594 -88794380 + T-rich Low_complexity Low_complexity 1 65 0 2 697 1025 99 21 0 chr15 14700595 14700737 -88794237 - B1_Mus2 SINE Alu -1 146 2 2 697 3268 98 4 2 chr15 14700737 14701188 -88793786 - L1_Mus3 LINE L1 -24 6614 6163 2 697 1729 73 9 0 chr15 14701183 14701415 -88793559 - L1_Mus3 LINE L1 -795 5843 5610 2 697 4970 141 1 3 chr15 14701410 14702194 -88792780 + L1_Mus3 LINE L1 4807 5589 -294 2 697 390 387 42 13 chr15 14702700 14702938 -88792036 - HAL1 LINE L1 -2062 445 201 2 697 201 74 0 0 chr15 14703657 14703684 -88791290 + (A)n Simple_repeat Simple_repeat 1 27 0 2 697 213 39 0 0 chr15 14704682 14704708 -88790266 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 697 186 71 0 0 chr15 14705092 14705120 -88789854 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 2 697 203 0 0 36 chr15 14705256 14705284 -88789690 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 2 697 483 317 31 18 chr15 14705631 14705856 -88789118 + L1_Mur3 LINE L1 5425 5652 -228 2 697 675 23 0 0 chr15 14706040 14706126 -88788848 - L1Md_A LINE L1 0 6582 6497 2 697 251 113 0 19 chr15 14707036 14707090 -88787884 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 2 697 403 360 46 41 chr15 14707203 14707400 -88787574 - B3A SINE B2 0 198 1 2 697 256 237 176 7 chr15 14707559 14707695 -88787279 + Lx7 LINE L1 7256 7414 -282 2 697 423 0 0 0 chr15 14707695 14707742 -88787232 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 697 186 103 0 0 chr15 14707787 14707816 -88787158 + (A)n Simple_repeat Simple_repeat 1 29 0 3 697 25 0 0 0 chr15 14708307 14708332 -88786642 + AT_rich Low_complexity Low_complexity 1 25 0 3 697 1127 55 7 0 chr15 14708601 14708746 -88786228 + B1_Mm SINE Alu 1 146 -1 3 697 234 0 0 0 chr15 14708749 14708775 -88786199 + (A)n Simple_repeat Simple_repeat 1 26 0 3 697 189 0 0 0 chr15 14708775 14708796 -88786178 + (GA)n Simple_repeat Simple_repeat 2 22 0 3 697 4479 69 10 5 chr15 14709005 14709589 -88785385 - LTRIS_Mus LTR ERV1 0 587 1 3 697 614 311 10 31 chr15 14709700 14709896 -88785078 + MTC LTR MaLR 230 421 0 3 697 3510 183 77 76 chr15 14709912 14710744 -88784230 - RLTR25B LTR ERVK -195 833 1 3 697 279 224 73 18 chr15 14710751 14710860 -88784114 + Tigger7 DNA MER2_type 2247 2361 -130 3 697 321 314 41 8 chr15 14711175 14711297 -88783677 - ERVL-E-int LTR ERVL -3219 2448 2323 3 697 30 59 0 0 chr15 14711749 14711800 -88783174 + AT_rich Low_complexity Low_complexity 1 51 0 3 697 320 43 22 0 chr15 14712442 14712488 -88782486 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 3 697 982 94 7 0 chr15 14712488 14712626 -88782348 - B1_Mus1 SINE Alu -9 139 1 3 697 1051 143 6 6 chr15 14713354 14713530 -88781444 - L1_Mur3 LINE L1 -1253 4624 4449 3 697 21 36 0 0 chr15 14713601 14713629 -88781345 + AT_rich Low_complexity Low_complexity 1 28 0 3 697 30 27 0 0 chr15 14713657 14713694 -88781280 + AT_rich Low_complexity Low_complexity 1 37 0 3 697 550 159 17 17 chr15 14713772 14713887 -88781087 - Lx2 LINE L1 -909 6088 5974 3 697 3012 208 94 21 chr15 14713879 14714570 -88780404 + Lx3C LINE L1 6219 6963 -13 3 697 480 35 0 0 chr15 14714570 14714628 -88780346 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 697 285 174 39 39 chr15 14714880 14714982 -88779992 + A-rich Low_complexity Low_complexity 3 104 0 3 697 186 103 0 0 chr15 14714992 14715021 -88779953 + (CAA)n Simple_repeat Simple_repeat 3 31 0 3 697 270 0 0 0 chr15 14715091 14715121 -88779853 + (TTA)n Simple_repeat Simple_repeat 2 31 0 3 697 1544 251 95 14 chr15 14715127 14715712 -88779262 - L1_Mur3 LINE L1 -1448 4432 3816 3 697 261 0 0 0 chr15 14715712 14715741 -88779233 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 697 351 0 0 0 chr15 14715745 14715784 -88779190 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 697 1544 251 95 14 chr15 14715784 14715912 -88779062 - L1_Mur3 LINE L1 -2065 3815 3664 3 697 609 291 20 36 chr15 14715936 14716189 -88778785 + L1_Mur3 LINE L1 4512 4760 -1120 3 697 3520 108 30 30 chr15 14716214 14716778 -88778196 - LTRIS2 LTR ERV1 0 564 1 3 697 883 330 107 84 chr15 14716929 14717667 -88777307 + Lx8 LINE L1 6434 7188 -285 3 697 21 0 0 0 chr15 14717781 14717802 -88777172 + AT_rich Low_complexity Low_complexity 1 21 0 3 697 288 53 0 0 chr15 14718401 14718439 -88776535 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 697 627 39 0 0 chr15 14718439 14718516 -88776458 + (GA)n Simple_repeat Simple_repeat 1 78 0 3 697 25 0 0 0 chr15 14719081 14719106 -88775868 + AT_rich Low_complexity Low_complexity 1 25 0 3 697 28 0 0 0 chr15 14719357 14719385 -88775589 + AT_rich Low_complexity Low_complexity 1 28 0 3 697 432 0 0 0 chr15 14720130 14720178 -88774796 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 697 2567 179 19 2 chr15 14721171 14721642 -88773332 - L1_Mur1 LINE L1 0 5886 5408 3 697 1730 218 118 22 chr15 14721640 14722091 -88772883 + Lx2B LINE L1 6499 6992 -8 3 697 367 305 128 13 chr15 14722097 14722323 -88772651 - MER2 DNA MER2_type -85 260 9 3 697 265 337 32 0 chr15 14722497 14722592 -88772382 + RSINE1 SINE B4 7 104 -61 3 697 330 196 0 0 chr15 14722635 14722732 -88772242 + CT-rich Low_complexity Low_complexity 1 97 0 3 697 36 0 0 0 chr15 14722799 14722835 -88772139 + AT_rich Low_complexity Low_complexity 1 36 0 3 697 327 159 10 21 chr15 14724037 14724133 -88770841 + (TA)n Simple_repeat Simple_repeat 2 96 0 3 697 6725 85 9 14 chr15 14725746 14726704 -88768270 + L1_Mus2 LINE L1 5642 6566 0 3 697 234 0 0 0 chr15 14726830 14726856 -88768118 + (A)n Simple_repeat Simple_repeat 1 26 0 3 697 3045 78 5 2 chr15 14727148 14727547 -88767427 - MTB LTR MaLR 0 400 1 3 697 21 36 0 0 chr15 14727553 14727581 -88767393 + AT_rich Low_complexity Low_complexity 1 28 0 3 697 333 133 0 32 chr15 14728952 14729014 -88765960 + B1_Mur4 SINE Alu 1 60 -90 3 697 272 161 0 111 chr15 14729089 14729152 -88765822 + RLTR25B LTR ERVK 442 497 -531 3 697 748 85 0 9 chr15 14729096 14729203 -88765771 + B1_Mus2 SINE Alu 42 147 0 3 697 3445 176 54 11 chr15 14729331 14729885 -88765089 - Lx2B LINE L1 -5 6995 6409 3 697 216 0 0 0 chr15 14729885 14729909 -88765065 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 697 3445 176 54 11 chr15 14729909 14729998 -88764976 - Lx2B LINE L1 -592 6408 6324 3 697 4758 180 81 6 chr15 14730002 14731215 -88763759 - Lx3C LINE L1 -379 6597 5297 3 697 6663 86 19 12 chr15 14731242 14732161 -88762813 - L1Md_F2 LINE L1 -8 6574 5650 3 697 7704 188 34 10 chr15 14732240 14733908 -88761066 + L1_Mur2 LINE L1 2748 4455 -1422 3 697 1228 182 22 36 chr15 14733930 14734204 -88760770 - Lx3C LINE L1 -1183 4694 4425 3 697 662 162 8 0 chr15 14734214 14734331 -88760643 + L1_Mur2 LINE L1 5069 5186 -691 3 697 27 81 0 0 chr15 14734332 14734394 -88760580 + AT_rich Low_complexity Low_complexity 1 62 0 3 697 894 270 94 4 chr15 14734405 14734680 -88760294 + Lx5 LINE L1 6748 7047 -3 3 697 261 333 63 26 chr15 14735046 14735132 -88759842 - Tigger7 DNA MER2_type -13 2478 2394 3 697 333 109 0 0 chr15 14735132 14735187 -88759787 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 697 261 333 63 26 chr15 14735187 14735291 -88759683 - Tigger7 DNA MER2_type -98 2393 2281 3 697 5325 3 0 0 chr15 14735330 14735920 -88759054 - L1Md_A LINE L1 0 6582 5993 3 697 24 32 0 0 chr15 14736377 14736408 -88758566 + AT_rich Low_complexity Low_complexity 1 31 0 3 697 29 0 0 0 chr15 14736974 14737003 -88757971 + AT_rich Low_complexity Low_complexity 1 29 0 3 697 189 178 0 0 chr15 14738421 14738466 -88756508 + GA-rich Low_complexity Low_complexity 1 45 0 3 697 203 189 0 0 chr15 14738815 14738852 -88756122 + A-rich Low_complexity Low_complexity 1 37 0 3 697 586 92 133 0 chr15 14739415 14739513 -88755461 + BC1_Mm scRNA scRNA 2 112 -40 3 697 33 43 0 0 chr15 14739655 14739702 -88755272 + AT_rich Low_complexity Low_complexity 1 47 0 3 697 245 312 117 23 chr15 14739718 14739846 -88755128 + MTEb LTR MaLR 4 143 -231 3 697 1008 121 7 0 chr15 14739877 14740156 -88754818 + (TG)n Simple_repeat Simple_repeat 1 281 0 3 697 334 177 0 16 chr15 14740156 14740219 -88754755 - HAL1-3A_ME LINE L1 -831 2027 1966 3 697 437 279 84 36 chr15 14740235 14740402 -88754572 + MTEb LTR MaLR 203 377 -2 3 697 351 161 0 0 chr15 14740429 14740491 -88754483 + L1_Mur2 LINE L1 120 181 -6531 3 697 552 335 132 47 chr15 14740491 14740789 -88754185 + MTEb-int LTR MaLR 26 359 -1221 3 697 210 37 0 0 chr15 14740789 14740816 -88754158 + (TTAG)n Simple_repeat Simple_repeat 3 29 0 3 697 552 335 132 47 chr15 14740816 14741000 -88753974 + MTEb-int LTR MaLR 360 549 -1031 3 697 1420 73 5 0 chr15 14741000 14741192 -88753782 + MTA_Mm LTR MaLR 1 193 -203 3 697 2518 11 0 0 chr15 14741192 14741475 -88753499 + L1Md_T LINE L1 5304 5586 -297 3 697 8409 34 1 0 chr15 14741475 14742470 -88752504 + L1Md_T LINE L1 5587 6582 0 3 697 1790 28 5 0 chr15 14742483 14742699 -88752275 + MTA_Mm LTR MaLR 178 394 -2 3 697 1316 351 108 44 chr15 14742712 14743509 -88751465 + MTEb-int LTR MaLR 553 1408 -172 3 697 2879 239 53 79 chr15 14743509 14744392 -88750582 - RMER13A LTR ERVK 0 860 1 3 697 1316 351 108 44 chr15 14744392 14744505 -88750469 + MTEb-int LTR MaLR 1409 1524 -56 3 697 334 346 15 15 chr15 14744505 14744640 -88750334 + MTEb LTR MaLR 1 135 -224 3 697 341 331 113 55 chr15 14744674 14744930 -88750044 - MTE-int LTR MaLR -143 1437 1167 3 697 25 0 0 0 chr15 14745811 14745836 -88749138 + AT_rich Low_complexity Low_complexity 1 25 0 3 697 21 0 0 0 chr15 14746089 14746110 -88748864 + AT_rich Low_complexity Low_complexity 1 21 0 3 697 24 0 0 0 chr15 14746590 14746614 -88748360 + AT_rich Low_complexity Low_complexity 1 24 0 3 697 25 31 0 0 chr15 14746678 14746710 -88748264 + AT_rich Low_complexity Low_complexity 1 32 0 3 697 27 49 0 0 chr15 14747549 14747590 -88747384 + AT_rich Low_complexity Low_complexity 1 41 0 3 697 26 50 0 0 chr15 14748774 14748814 -88746160 + AT_rich Low_complexity Low_complexity 1 40 0 3 697 360 64 0 0 chr15 14749253 14749300 -88745674 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 697 1885 141 7 0 chr15 14749897 14750187 -88744787 - Lx LINE L1 -162 6492 6201 3 697 305 250 0 48 chr15 14750187 14750271 -88744703 + 4.5SRNA scRNA scRNA 4 83 -11 3 697 1232 229 47 40 chr15 14750271 14750675 -88744299 - L1_Mur3 LINE L1 -763 5117 4711 3 697 4583 199 36 71 chr15 14750723 14752137 -88742837 - L1_Mur3 LINE L1 -2400 3480 2117 3 697 607 271 99 0 chr15 14752139 14752320 -88742654 + ORR1B1 LTR MaLR 1 199 -168 3 697 1028 179 0 0 chr15 14752320 14752521 -88742453 - L1_Mur2 LINE L1 -1401 4476 4276 3 697 8259 155 35 9 chr15 14752514 14754136 -88740838 + Lx4A LINE L1 5400 7056 -2 3 697 901 216 17 0 chr15 14754154 14754335 -88740639 + ORR1B1 LTR MaLR 211 394 0 3 697 1050 202 12 17 chr15 14754427 14754721 -88740253 - L1_Mur3 LINE L1 -3808 2069 1786 3 697 448 349 52 44 chr15 14755441 14755711 -88739263 - ORR1D2 LTR MaLR 0 370 99 3 697 322 345 0 26 chr15 14756202 14756318 -88738656 + Tigger5 DNA MER2_type 2294 2406 0 3 697 24 0 0 0 chr15 14756592 14756616 -88738358 + AT_rich Low_complexity Low_complexity 1 24 0 3 697 30 0 0 0 chr15 14757288 14757318 -88737656 + AT_rich Low_complexity Low_complexity 1 30 0 3 697 768 334 67 36 chr15 14757407 14757823 -88737151 + MER67D LTR ERV1 53 481 -33 3 697 1148 306 35 37 chr15 14758087 14758488 -88736486 + MTD LTR MaLR 3 402 -17 3 697 203 182 23 0 chr15 14758490 14758534 -88736440 + A-rich Low_complexity Low_complexity 4 48 0 3 697 576 0 0 0 chr15 14759359 14759423 -88735551 + (GA)n Simple_repeat Simple_repeat 1 64 0 3 697 23 0 0 0 chr15 14760157 14760180 -88734794 + AT_rich Low_complexity Low_complexity 1 23 0 3 697 422 328 197 11 chr15 14760181 14760369 -88734605 - Lx5 LINE L1 -5 7045 6823 3 697 3814 243 89 11 chr15 14760388 14761396 -88733578 - Lx5 LINE L1 -280 6770 5684 3 697 2560 202 32 22 chr15 14761395 14761986 -88732988 - Lx4B LINE L1 -628 6430 5834 3 697 613 170 9 0 chr15 14761984 14762096 -88732878 - Lx4B LINE L1 -213 5664 5552 3 697 1231 232 7 0 chr15 14762092 14762372 -88732602 - Lx4B LINE L1 -517 5360 5079 3 697 6282 161 14 11 chr15 14762506 14763913 -88731061 + Lx LINE L1 5232 6652 -2 3 697 237 276 35 0 chr15 14763917 14763975 -88730999 - RMER12 LTR ERVK -162 1160 1101 3 697 755 133 0 0 chr15 14764122 14764235 -88730739 - L1_Mur2 LINE L1 -2251 3626 3514 3 697 437 113 0 0 chr15 14765365 14765436 -88729538 + Lx3B LINE L1 6900 6970 -3 4 697 21 0 0 0 chr15 14765444 14765465 -88729509 + AT_rich Low_complexity Low_complexity 1 21 0 4 697 239 298 0 23 chr15 14766304 14766390 -88728584 + BC1_Mm scRNA scRNA 1 84 -68 4 697 21 0 0 0 chr15 14766953 14766974 -88728000 + AT_rich Low_complexity Low_complexity 1 21 0 4 697 1079 302 48 16 chr15 14766974 14767348 -88727626 - Lx6 LINE L1 -43 7417 7032 4 697 266 220 60 60 chr15 14767375 14767491 -88727483 - Lx9 LINE L1 -216 7428 7313 4 697 269 135 0 19 chr15 14767498 14767551 -88727423 + T-rich Low_complexity Low_complexity 3 54 0 4 697 317 312 50 21 chr15 14767551 14767692 -88727282 - Lx9 LINE L1 -324 7320 7176 4 697 22 0 0 0 chr15 14768013 14768035 -88726939 + AT_rich Low_complexity Low_complexity 1 22 0 4 697 44 63 0 0 chr15 14768091 14768170 -88726804 + AT_rich Low_complexity Low_complexity 1 79 0 4 697 231 103 0 0 chr15 14768364 14768403 -88726571 - L1_Mm LINE L1 -1741 4142 4104 4 697 3394 94 15 2 chr15 14768402 14768880 -88726094 + L1_Mus3 LINE L1 5917 6400 -238 4 697 756 247 82 16 chr15 14768938 14768956 -88726018 + L1_Rod LINE L1 5508 5532 -315 4 697 2570 151 58 11 chr15 14768956 14769406 -88725568 + Lx2 LINE L1 6525 6995 -2 4 697 756 247 82 16 chr15 14769406 14769630 -88725344 + L1_Rod LINE L1 5533 5766 -81 4 697 222 204 0 0 chr15 14769950 14769999 -88724975 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 697 21 0 0 0 chr15 14770103 14770124 -88724850 + AT_rich Low_complexity Low_complexity 1 21 0 4 697 7122 90 7 9 chr15 14770472 14771548 -88723426 - L1Md_F2 LINE L1 -12 6570 5498 4 697 3199 48 30 0 chr15 14771548 14771947 -88723027 - RLTR10A LTR ERVK 0 411 1 4 697 2845 102 2 2 chr15 14771947 14771962 -88723012 - L1Md_F2 LINE L1 -386 5497 5483 4 697 4696 94 21 13 chr15 14771962 14772641 -88722333 - RLTR10-int LTR ERVK -16 1971 1288 4 697 1580 68 23 0 chr15 14772642 14772861 -88722113 - IAP-d-int LTR ERVK -658 5884 5661 4 697 3553 60 86 22 chr15 14772861 14773352 -88721622 - IAP-d-int LTR ERVK -1015 5527 5006 4 697 738 197 26 0 chr15 14773352 14773504 -88721470 - IAP-d-int LTR ERVK -6040 502 347 4 697 1528 144 73 15 chr15 14773498 14773803 -88721171 - IAP-d-int LTR ERVK -1385 602 55 4 697 3080 60 19 19 chr15 14773803 14774214 -88720760 - RLTR10A LTR ERVK 0 411 1 4 697 3586 81 2 6 chr15 14774214 14774688 -88720286 - L1_Mm LINE L1 -382 5501 5027 4 697 2251 73 56 0 chr15 14774688 14774991 -88719983 - RLTR46 LTR ERVK 0 320 1 4 697 3586 81 2 6 chr15 14774991 14775011 -88719963 - L1_Mm LINE L1 -857 5026 5009 4 697 19297 238 35 25 chr15 14775018 14782554 -88712420 - IAPEY3-int LTR ERVK -350 7330 3 4 697 2218 73 56 0 chr15 14782556 14782859 -88712115 - RLTR46 LTR ERVK 0 320 1 4 697 1022 119 43 2 chr15 14782859 14783043 -88711931 - L1Md_F LINE L1 -851 5035 4847 4 697 16148 125 20 26 chr15 14783055 14786430 -88708544 - L1Md_F LINE L1 -2302 3581 218 4 697 24 0 0 0 chr15 14786634 14786658 -88708316 + AT_rich Low_complexity Low_complexity 1 24 0 4 697 3054 124 0 0 chr15 14787255 14787765 -88707209 - Lx4A LINE L1 -1138 5920 5413 4 697 6532 122 37 11 chr15 14787765 14788807 -88706167 + Lx3_Mus LINE L1 5924 6993 -16 4 697 3432 253 124 18 chr15 14788898 14789203 -88705771 + Lx5 LINE L1 5769 6113 -937 4 697 486 0 0 0 chr15 14789203 14789257 -88705717 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 697 3432 253 124 18 chr15 14789257 14790108 -88704866 + Lx5 LINE L1 6114 7046 -4 4 697 333 0 0 0 chr15 14791157 14791194 -88703780 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 697 28 48 0 0 chr15 14791355 14791397 -88703577 + AT_rich Low_complexity Low_complexity 1 42 0 4 697 281 197 14 0 chr15 14792855 14792926 -88702048 + (TA)n Simple_repeat Simple_repeat 1 72 0 4 697 369 0 0 0 chr15 14793425 14793466 -88701508 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 697 237 65 0 0 chr15 14794207 14794238 -88700736 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 697 216 0 0 0 chr15 14794727 14794751 -88700223 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 4 697 696 252 0 0 chr15 14795177 14795316 -88699658 - B1_Mur4 SINE Alu -11 139 1 4 697 2780 231 85 3 chr15 14795794 14796467 -88698507 + Lx5 LINE L1 6320 7047 -3 4 697 264 256 183 24 chr15 14796696 14796860 -88698114 + L2 LINE L2 2332 2521 -898 4 697 312 27 0 0 chr15 14797133 14797170 -88697804 + (TC)n Simple_repeat Simple_repeat 2 38 0 4 697 201 121 0 0 chr15 14797170 14797202 -88697772 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 697 202 278 14 0 chr15 14797242 14797314 -88697660 + A-rich Low_complexity Low_complexity 2 74 0 4 697 252 267 139 16 chr15 14798168 14798290 -88696684 - MLT1A1 LTR MaLR 0 408 272 4 697 324 48 0 0 chr15 14800853 14800895 -88694079 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 697 513 274 16 8 chr15 14800908 14801033 -88693941 - B1_Mus1 SINE Alu -12 136 11 4 697 238 346 62 57 chr15 14801059 14801150 -88693824 + MLT-int LTR MaLR 1453 1539 -196 4 697 4187 137 37 7 chr15 14801150 14801858 -88693116 + Lx LINE L1 5926 6654 0 4 697 238 346 62 57 chr15 14801858 14801993 -88692981 + MLT-int LTR MaLR 1540 1680 -55 4 697 369 0 0 0 chr15 14802337 14802378 -88692596 + (TTATA)n Simple_repeat Simple_repeat 2 42 0 4 697 2237 114 220 26 chr15 14802884 14803343 -88691631 - RLTR6_Mm LTR ERV1 -70 584 37 4 697 1292 54 0 0 chr15 14803453 14803621 -88691353 - RLTR6-int LTR ERV1 0 7778 7611 4 697 35170 15 21 0 chr15 14803609 14807884 -88687090 - RLTR6-int LTR ERV1 -3411 4367 1 4 697 2343 115 210 27 chr15 14807884 14808365 -88686609 - RLTR6_Mm LTR ERV1 -49 605 37 4 697 235 218 194 65 chr15 14808367 14808475 -88686499 - RLTR6_Mm LTR ERV1 -532 122 1 4 697 495 0 0 0 chr15 14809745 14809800 -88685174 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 697 1222 263 226 9 chr15 14809817 14810343 -88684631 + Lx9 LINE L1 6817 7456 -188 4 87 3187 241 67 19 chr15 14810563 14811529 -88683445 - Lx5 LINE L1 -385 6665 5653 4 698 4162 217 21 3 chr15 14811528 14812109 -88682865 + L1_Mur2 LINE L1 4646 5228 -649 4 698 189 0 0 0 chr15 14812109 14812130 -88682844 + (TA)n Simple_repeat Simple_repeat 1 21 0 4 698 4162 217 21 3 chr15 14812130 14812541 -88682433 + L1_Mur2 LINE L1 5229 5655 -222 4 698 1094 214 48 7 chr15 14813387 14813656 -88681318 - Lx2B LINE L1 -590 6410 6131 4 698 619 221 0 16 chr15 14813820 14813944 -88681030 - Lx3C LINE L1 -138 6838 6717 4 698 2399 214 78 7 chr15 14813938 14814518 -88680456 + Lx2B LINE L1 6094 6714 -286 4 698 371 332 24 48 chr15 14814657 14814863 -88680111 - Lx8 LINE L1 -656 6817 6617 4 698 263 152 61 0 chr15 14814865 14815029 -88679945 + (TATAG)n Simple_repeat Simple_repeat 2 175 0 4 698 364 196 65 12 chr15 14815095 14815265 -88679709 + (TATAG)n Simple_repeat Simple_repeat 2 180 0 4 698 25 31 0 0 chr15 14815558 14815590 -88679384 + AT_rich Low_complexity Low_complexity 1 32 0 4 698 1495 198 68 21 chr15 14815982 14816322 -88678652 - Lx5 LINE L1 0 7050 6695 4 698 22 0 0 0 chr15 14817189 14817211 -88677763 + AT_rich Low_complexity Low_complexity 1 22 0 4 698 658 335 41 97 chr15 14817299 14817639 -88677335 + MTE2b LTR MaLR 59 379 0 4 698 5406 125 7 8 chr15 14817718 14818573 -88676401 - Lx2A1 LINE L1 -13 6995 6142 4 698 28 29 0 0 chr15 14818721 14818756 -88676218 + AT_rich Low_complexity Low_complexity 1 35 0 4 698 24 85 0 0 chr15 14818936 14818995 -88675979 + AT_rich Low_complexity Low_complexity 1 59 0 4 698 296 253 12 12 chr15 14819197 14819281 -88675693 + CT-rich Low_complexity Low_complexity 2 85 0 4 698 35389 16 2 2 chr15 14820934 14825980 -88668994 - L1Md_A LINE L1 0 6582 1537 4 698 39364 7 1 6 chr15 14825952 14832146 -88662828 - L1Md_A LINE L1 0 6582 423 4 698 2093 276 60 28 chr15 14834013 14835069 -88659905 + Lx5 LINE L1 5475 6804 -656 4 698 306 73 0 0 chr15 14835092 14835133 -88659841 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 698 3084 102 4 37 chr15 14835433 14835924 -88659050 - L1_Mus3 LINE L1 -1 6637 6163 4 698 619 100 80 0 chr15 14835929 14836029 -88658945 + L1_Mur1 LINE L1 4961 5068 -818 4 698 563 231 172 15 chr15 14836299 14836625 -88658349 - Lx9 LINE L1 -8 7636 7260 4 698 1442 267 32 10 chr15 14836625 14837037 -88657937 + MTC LTR MaLR 1 421 0 4 698 573 15 0 0 chr15 14838115 14838181 -88656793 + (TC)n Simple_repeat Simple_repeat 2 67 0 4 698 373 285 29 88 chr15 14838316 14838520 -88656454 - Lx9 LINE L1 -191 7453 7262 4 698 667 360 27 36 chr15 14838670 14839119 -88655855 + Lx7 LINE L1 6460 6904 -792 4 698 243 279 14 22 chr15 14839375 14839514 -88655460 + (TA)n Simple_repeat Simple_repeat 2 139 0 4 698 256 301 10 10 chr15 14839485 14839589 -88655385 + (CATA)n Simple_repeat Simple_repeat 3 106 0 4 698 3295 231 17 58 chr15 14840052 14840920 -88654054 - Lx3C LINE L1 -186 6790 5958 4 698 2704 134 22 5 chr15 14840915 14841456 -88653518 + Lx3B LINE L1 5410 5955 -1018 4 698 1390 162 4 0 chr15 14841457 14841688 -88653286 - RMER6C LTR ERVK -358 332 101 4 698 2865 71 2 53 chr15 14841688 14841781 -88653193 + MTA_Mm LTR MaLR 1 93 -303 4 698 2562 52 6 3 chr15 14841781 14842106 -88652868 - IAPLTR3 LTR ERVK 0 326 1 4 698 2865 71 2 53 chr15 14842106 14842206 -88652768 + MTA_Mm LTR MaLR 94 188 -208 4 698 4393 56 7 0 chr15 14842206 14842761 -88652213 + L1Md_F2 LINE L1 6023 6581 -1 4 698 360 0 0 0 chr15 14842770 14842810 -88652164 + (GA)n Simple_repeat Simple_repeat 2 41 0 4 698 2865 71 2 53 chr15 14842810 14843022 -88651952 + MTA_Mm LTR MaLR 189 396 0 4 698 418 200 11 22 chr15 14843027 14843119 -88651855 - RMER6C LTR ERVK -597 93 3 4 698 28053 91 54 7 chr15 14843124 14847871 -88647103 + L1Md_F2 LINE L1 631 5571 -312 4 698 7420 70 13 2 chr15 14847872 14848852 -88646122 + L1Md_F2 LINE L1 5588 6578 -4 4 698 23 0 0 0 chr15 14848852 14848875 -88646099 + AT_rich Low_complexity Low_complexity 1 23 0 4 698 701 121 0 84 chr15 14849653 14849807 -88645167 - L1_Mus3 LINE L1 -2 6636 6496 4 698 318 297 25 37 chr15 14849890 14850051 -88644923 - L1ME1 LINE L1 -297 5882 5724 4 698 22 35 0 0 chr15 14850251 14850280 -88644694 + AT_rich Low_complexity Low_complexity 1 29 0 4 698 246 32 0 0 chr15 14850511 14850542 -88644432 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 698 320 152 15 0 chr15 14850562 14850628 -88644346 + CT-rich Low_complexity Low_complexity 1 67 0 4 698 3702 49 6 11 chr15 14850883 14851403 -88643571 - L1Md_F2 LINE L1 0 6582 6108 4 698 26 30 0 0 chr15 14851574 14851607 -88643367 + AT_rich Low_complexity Low_complexity 1 33 0 4 698 1491 215 70 37 chr15 14852495 14852990 -88641984 - RLTR12A LTR ERVK -2 566 1 4 698 356 55 0 18 chr15 14852992 14853048 -88641926 + (TTTA)n Simple_repeat Simple_repeat 1 55 0 4 698 2950 60 0 0 chr15 14853048 14853413 -88641561 - L1_Mus1 LINE L1 -27 6540 6176 4 698 503 0 64 13 chr15 14853666 14853744 -88641230 + (TTTA)n Simple_repeat Simple_repeat 4 85 0 5 698 1077 99 0 0 chr15 14853744 14853896 -88641078 - B2_Mm2 SINE B2 -42 153 2 5 698 26 30 0 0 chr15 14855112 14855145 -88639829 + AT_rich Low_complexity Low_complexity 1 33 0 5 698 25 65 0 0 chr15 14856182 14856228 -88638746 + AT_rich Low_complexity Low_complexity 1 46 0 5 698 26 64 0 0 chr15 14856913 14856960 -88638014 + AT_rich Low_complexity Low_complexity 1 47 0 5 698 608 270 263 0 chr15 14857508 14857814 -88637160 - Lx6 LINE L1 -22 7438 7052 5 698 259 228 204 19 chr15 14857840 14857943 -88637031 - MTE2a LTR MaLR 0 379 258 5 698 24 53 0 0 chr15 14858764 14858802 -88636172 + AT_rich Low_complexity Low_complexity 1 38 0 5 698 183 42 0 0 chr15 14858986 14859010 -88635964 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 698 550 0 29 0 chr15 14859015 14859085 -88635889 + (CAAAA)n Simple_repeat Simple_repeat 4 75 0 5 698 623 359 33 72 chr15 14859086 14859419 -88635555 - MTEa LTR MaLR -55 324 5 5 698 4912 145 11 41 chr15 14859807 14860706 -88634268 - L1_Mur2 LINE L1 -691 5186 4315 5 698 1059 202 0 5 chr15 14860701 14860920 -88634054 + Lx LINE L1 5153 5370 -513 5 698 5936 151 19 14 chr15 14860905 14861904 -88633070 + Lx LINE L1 5647 6650 -4 5 698 278 289 48 0 chr15 14865294 14865377 -88629597 - B4 SINE B4 -200 92 6 5 698 2057 155 12 3 chr15 14865670 14866013 -88628961 - ORR1A1 LTR MaLR 0 346 1 5 698 4687 71 14 0 chr15 14866123 14866746 -88628228 + L1_Mus1 LINE L1 5922 6553 -14 5 698 2601 17 0 0 chr15 14866746 14867042 -88627932 + L1Md_T LINE L1 5291 5586 -297 5 698 8360 35 1 0 chr15 14867042 14868036 -88626938 + L1Md_T LINE L1 5587 6581 -1 5 698 22 0 0 0 chr15 14868048 14868070 -88626904 + AT_rich Low_complexity Low_complexity 1 22 0 5 698 660 272 132 75 chr15 14868691 14868957 -88626017 - RMER20B LTR ERVK 0 627 347 5 698 441 245 43 0 chr15 14868989 14869083 -88625891 - RMER20B LTR ERVK -525 102 5 5 698 444 237 29 36 chr15 14869089 14869229 -88625745 - RLTR15 LTR ERVK -220 139 1 5 698 431 221 6 128 chr15 14869230 14869386 -88625588 - MYSERV6-int LTR ERVK 0 8959 8823 5 698 8043 232 41 45 chr15 14869390 14871617 -88623357 - MYSERV6-int LTR ERVK -4344 4615 2948 5 698 357 204 0 20 chr15 14871617 14871717 -88623257 - Lx LINE L1 -8 6646 6549 5 698 8043 216 18 36 chr15 14871717 14872123 -88622851 - MYSERV6-int LTR ERVK -6012 2947 2573 5 698 7949 58 2 7 chr15 14872141 14873665 -88621309 - L1Md_F2 LINE L1 -3 6579 5068 5 698 10201 70 13 0 chr15 14873664 14875013 -88619961 + L1Md_F2 LINE L1 3695 5061 -822 5 698 1961 263 36 88 chr15 14875013 14875838 -88619136 - MYSERV6-int LTR ERVK -6374 2585 1804 5 698 2293 66 65 6 chr15 14875838 14875955 -88619019 + RLTR10C LTR ERVK 96 222 -214 5 698 411 21 0 0 chr15 14875955 14876003 -88618971 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 698 2293 66 65 6 chr15 14876003 14876207 -88618767 + RLTR10C LTR ERVK 223 434 -2 5 698 1340 176 36 19 chr15 14876589 14876973 -88618001 - Lx4B LINE L1 -609 6449 6011 5 698 1919 147 18 15 chr15 14876968 14877307 -88617667 + Lx4B LINE L1 5679 6018 -1040 5 698 316 353 82 11 chr15 14877846 14878115 -88616859 - RLTR15 LTR ERVK -68 291 4 5 698 2787 176 17 12 chr15 14878241 14878844 -88616130 - L1_Mur1 LINE L1 -2470 3416 2811 5 698 448 354 42 42 chr15 14878956 14879239 -88615735 + RLTR26 LTR ERVK 135 417 -225 5 698 2160 168 25 11 chr15 14879498 14879932 -88615042 - L1_Mur1 LINE L1 -3066 2820 2381 5 698 2920 214 36 20 chr15 14879926 14881017 -88613957 - L1_Mur1 LINE L1 -1996 1918 798 5 698 281 336 111 8 chr15 14881525 14881651 -88613323 + Lx7 LINE L1 6340 6478 -1218 5 698 647 351 38 14 chr15 14881697 14882067 -88612907 + Lx7 LINE L1 6557 6935 -761 5 698 398 212 0 24 chr15 14882509 14882591 -88612383 - HAL1-3A_ME LINE L1 -824 2034 1955 5 698 483 18 0 0 chr15 14882735 14882791 -88612183 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 698 27 0 0 0 chr15 14883052 14883079 -88611895 + AT_rich Low_complexity Low_complexity 1 27 0 5 698 210 222 0 0 chr15 14883413 14883467 -88611507 + A-rich Low_complexity Low_complexity 1 54 0 5 698 1114 238 4 47 chr15 14883510 14883766 -88611208 - MTC LTR MaLR -176 245 1 5 698 2102 243 31 32 chr15 14883771 14884717 -88610257 + L1_Mur3 LINE L1 616 1560 -4320 5 698 11132 148 28 7 chr15 14884718 14886219 -88608755 + L1VL4 LINE L1 194 1727 -1832 5 698 189 0 0 0 chr15 14886219 14886240 -88608734 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 5 698 11132 117 12 0 chr15 14886240 14887154 -88607820 + L1VL4 LINE L1 1728 2653 -906 5 698 257 257 194 69 chr15 14887462 14887679 -88607295 + RLTR47_MM LTR ERV1 238 481 -51 5 698 9608 162 112 55 chr15 14887705 14890143 -88604831 + L1Md_F2 LINE L1 3009 5585 -298 5 698 8108 48 0 0 chr15 14890144 14891128 -88603846 + L1Md_F2 LINE L1 5587 6570 -12 5 698 6953 138 16 4 chr15 14891132 14893052 -88601922 + L1_Mus4 LINE L1 4686 6629 -7 5 698 35 41 0 0 chr15 14893053 14893102 -88601872 + AT_rich Low_complexity Low_complexity 1 49 0 5 698 2023 221 81 28 chr15 14893102 14893771 -88601203 + L1_Mur2 LINE L1 1545 2248 -3632 5 698 1215 219 5 5 chr15 14893818 14894094 -88600880 + L1_Mur3 LINE L1 4821 5064 -1082 5 698 2515 218 32 62 chr15 14894094 14894487 -88600487 + L1_Mur2 LINE L1 4831 5228 -649 5 698 243 0 0 0 chr15 14894487 14894514 -88600460 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 698 2515 218 32 62 chr15 14894514 14894830 -88600144 + L1_Mur2 LINE L1 5229 5518 -359 5 698 1311 339 57 26 chr15 14894838 14895416 -88599558 + Lx5 LINE L1 6455 7050 0 5 698 27 29 0 0 chr15 14896573 14896607 -88598367 + AT_rich Low_complexity Low_complexity 1 34 0 5 698 189 0 0 0 chr15 14897000 14897021 -88597953 + (A)n Simple_repeat Simple_repeat 1 21 0 5 698 280 326 76 33 chr15 14897109 14897293 -88597681 + MLT1A1 LTR MaLR 14 205 -203 5 698 705 24 0 0 chr15 14898894 14898977 -88595997 + (TA)n Simple_repeat Simple_repeat 2 84 0 5 698 207 108 27 0 chr15 14899117 14899154 -88595820 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 698 309 82 0 0 chr15 14899154 14899203 -88595771 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 698 514 136 40 13 chr15 14899234 14899383 -88595591 + (TAGA)n Simple_repeat Simple_repeat 2 154 0 5 698 549 0 0 0 chr15 14899463 14899524 -88595450 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 698 1942 168 80 13 chr15 14899838 14900302 -88594672 + L1_Mur2 LINE L1 2443 2937 -2940 5 698 288 232 0 42 chr15 14901568 14901640 -88593334 + GA-rich Low_complexity Low_complexity 1 69 0 5 698 450 376 74 55 chr15 14901641 14901897 -88593077 - B4A SINE B4 -22 270 10 5 698 21 0 0 0 chr15 14902633 14902654 -88592320 + AT_rich Low_complexity Low_complexity 1 21 0 5 698 1593 227 90 40 chr15 14902698 14903252 -88591722 + RLTR31A_Mm LTR ERVK 3 584 0 5 698 358 385 15 30 chr15 14903376 14903510 -88591464 + B3A SINE B2 5 136 -62 5 698 365 326 63 71 chr15 14903515 14903769 -88591205 + Lx9 LINE L1 6942 7193 -451 5 698 297 378 6 0 chr15 14903806 14903970 -88591004 + Lx9 LINE L1 7266 7430 -214 5 698 342 107 0 0 chr15 14904043 14904099 -88590875 + (TCTCCC)n Simple_repeat Simple_repeat 3 58 0 5 698 2647 50 12 0 chr15 14904226 14904565 -88590409 + L1Md_F3 LINE L1 6241 6583 -1 5 698 44 56 0 0 chr15 14904832 14904904 -88590070 + AT_rich Low_complexity Low_complexity 1 72 0 5 698 36891 53 2 12 chr15 14905080 14911283 -88583691 - L1Md_F2 LINE L1 0 6582 441 5 698 838 346 48 44 chr15 14913555 14914078 -88580896 + RMER5 LTR ERV1 1 525 -9 5 698 725 68 0 10 chr15 14914816 14914920 -88580054 - B1_Mus2 SINE Alu -3 144 42 5 698 232 203 55 78 chr15 14914836 14914964 -88580010 - RLTR25B LTR ERVK -507 521 397 5 698 214 0 0 157 chr15 14914965 14915067 -88579907 + (CTCTG)n Simple_repeat Simple_repeat 5 90 0 5 698 323 136 16 63 chr15 14915068 14915131 -88579843 - B1_Mus1 SINE Alu -88 60 1 5 698 263 246 15 44 chr15 14915072 14915140 -88579834 - B4A SINE B4 -150 142 77 5 698 1993 241 39 11 chr15 14915172 14915634 -88579340 - RLTR40 LTR ERVK -5 812 338 5 698 576 222 66 7 chr15 14915652 14915788 -88579186 + B1_Mus1 SINE Alu 2 145 -3 5 698 240 35 0 0 chr15 14915807 14915836 -88579138 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 5 698 1270 229 18 48 chr15 14915845 14916180 -88578794 - RLTR40 LTR ERVK -490 327 3 5 698 6493 49 9 0 chr15 14916180 14916976 -88577998 - L1Md_F2 LINE L1 -48 6534 5732 5 698 209 111 0 43 chr15 14917033 14917080 -88577894 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 5 698 4087 143 17 1 chr15 14918259 14918909 -88576065 + Lx3B LINE L1 6311 6970 -3 5 698 24 32 0 0 chr15 14918917 14918948 -88576026 + AT_rich Low_complexity Low_complexity 1 31 0 5 698 849 251 38 65 chr15 14918955 14919245 -88575729 + Lx7 LINE L1 5623 5904 -1792 5 698 494 319 9 15 chr15 14919267 14919416 -88575558 - B3 SINE B2 -35 163 3 5 698 591 328 49 30 chr15 14919820 14920084 -88574890 + Lx8 LINE L1 6359 6627 -846 5 698 1113 319 31 26 chr15 14920084 14920499 -88574475 + MTD LTR MaLR 1 417 -2 5 698 842 331 99 29 chr15 14920501 14921225 -88573749 + Lx8 LINE L1 6623 7397 -76 5 698 187 143 17 67 chr15 14921304 14921364 -88573610 + (CATATA)n Simple_repeat Simple_repeat 1 57 0 5 698 26 0 0 0 chr15 14921475 14921501 -88573473 + AT_rich Low_complexity Low_complexity 1 26 0 5 698 21 0 0 0 chr15 14921769 14921790 -88573184 + AT_rich Low_complexity Low_complexity 1 21 0 5 698 290 318 150 0 chr15 14921793 14922013 -88572961 - Lx9 LINE L1 -160 7484 7232 5 698 24 96 0 0 chr15 14922267 14922340 -88572634 + AT_rich Low_complexity Low_complexity 1 73 0 5 698 33 73 0 0 chr15 14923083 14923151 -88571823 + AT_rich Low_complexity Low_complexity 1 68 0 5 698 4858 207 16 22 chr15 14924308 14925469 -88569505 - Lx2B LINE L1 -320 6680 5525 5 698 606 273 93 68 chr15 14925477 14925713 -88569261 + Lx3C LINE L1 6693 6934 -66 5 698 203 132 0 102 chr15 14925716 14925775 -88569199 + A-rich Low_complexity Low_complexity 4 56 0 5 698 240 321 56 42 chr15 14925819 14925962 -88569012 + RLTR14 LTR ERV1 225 369 -13 5 698 1468 108 13 0 chr15 14926198 14926429 -88568545 - L1_Mus3 LINE L1 -3 6635 6402 5 698 3132 51 2 53 chr15 14926435 14926679 -88568295 + L1_Mus2 LINE L1 5959 6200 -366 5 698 3241 181 29 46 chr15 14926679 14927110 -88567864 + RMER17A LTR ERVK 3 418 -333 5 698 559 39 26 0 chr15 14927110 14927188 -88567786 + (TC)n Simple_repeat Simple_repeat 2 81 0 5 698 3241 181 29 46 chr15 14927188 14927518 -88567456 + RMER17A LTR ERVK 419 751 0 5 698 3132 51 2 53 chr15 14927518 14927705 -88567269 + L1_Mus2 LINE L1 6201 6368 -198 5 698 1294 149 4 4 chr15 14928794 14929023 -88565951 - L1_Mus4 LINE L1 -1 6635 6407 5 698 29 60 0 0 chr15 14929444 14929494 -88565480 + AT_rich Low_complexity Low_complexity 1 50 0 5 698 428 63 32 0 chr15 14930291 14930354 -88564620 + (TCCC)n Simple_repeat Simple_repeat 1 65 0 5 698 355 279 151 41 chr15 14930354 14930484 -88564490 - HAL1-3A_ME LINE L1 -421 2437 2284 6 698 477 34 0 0 chr15 14930484 14930543 -88564431 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 698 355 279 151 41 chr15 14930543 14930584 -88564390 - HAL1-3A_ME LINE L1 -575 2283 2247 6 698 211 100 39 39 chr15 14931606 14931658 -88563316 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 6 698 452 241 18 147 chr15 14931658 14931828 -88563146 - B1_Mur2 SINE Alu -1 148 1 6 698 549 80 0 0 chr15 14931837 14931912 -88563062 + (TTTTC)n Simple_repeat Simple_repeat 4 78 0 6 698 1058 83 7 0 chr15 14933234 14933379 -88561595 + B1_Mus1 SINE Alu 3 148 0 6 698 10494 14 0 0 chr15 14933700 14935066 -88559908 - L1Md_T LINE L1 -545 6037 4672 6 698 4810 8 0 0 chr15 14935066 14935600 -88559374 + L1Md_T LINE L1 6049 6582 0 6 698 21 36 0 0 chr15 14935982 14936010 -88558964 + AT_rich Low_complexity Low_complexity 1 28 0 6 698 293 47 0 23 chr15 14936875 14936919 -88558055 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 6 698 1815 250 69 36 chr15 14937105 14937968 -88557006 - Lx9 LINE L1 -6 7638 6678 6 698 381 381 6 43 chr15 14939477 14939639 -88555335 + B3A SINE B2 2 157 -41 6 698 21 57 0 0 chr15 14940122 14940157 -88554817 + AT_rich Low_complexity Low_complexity 1 35 0 6 698 26 64 0 0 chr15 14940376 14940423 -88554551 + AT_rich Low_complexity Low_complexity 1 47 0 6 698 1374 70 0 41 chr15 14941499 14941693 -88553281 - MT2C_Mm LTR ERVL 0 475 290 6 698 1882 71 15 13 chr15 14941627 14941935 -88553039 - MTA_Mm LTR MaLR -106 301 3 6 87 328 315 139 60 chr15 14942049 14942380 -88552594 - MER67B LTR ERV1 -304 357 1 6 699 644 269 44 28 chr15 14942688 14942937 -88552037 + RMER5 LTR ERV1 33 285 -249 6 699 191 36 36 0 chr15 14944140 14944168 -88550806 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 699 215 202 0 12 chr15 14944446 14944531 -88550443 + (TA)n Simple_repeat Simple_repeat 2 85 0 6 699 367 316 42 63 chr15 14944902 14945099 -88549875 + B2_Mm2 SINE B2 3 209 -7 6 699 1445 237 103 14 chr15 14945354 14945919 -88549055 + Lx9 LINE L1 7014 7628 -16 6 699 3943 57 0 0 chr15 14946926 14947606 -88547368 - L1Md_F2 LINE L1 -532 6050 5371 6 699 6182 82 1 2 chr15 14947588 14947840 -88547134 + L1_Mm LINE L1 4483 4734 -1149 6 699 333 0 0 0 chr15 14947840 14947877 -88547097 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 6 699 6182 82 1 2 chr15 14947877 14948508 -88546466 + L1_Mm LINE L1 4735 5363 -520 6 699 1984 162 63 11 chr15 14949181 14949562 -88545412 + RLTR9D LTR ERVK 1 401 -2 6 699 261 0 0 0 chr15 14950035 14950064 -88544910 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 699 25 51 0 0 chr15 14950088 14950127 -88544847 + AT_rich Low_complexity Low_complexity 1 39 0 6 699 21 0 0 0 chr15 14951763 14951784 -88543190 + AT_rich Low_complexity Low_complexity 1 21 0 6 699 1442 161 72 48 chr15 14952801 14952925 -88542049 - Lx LINE L1 -5 6649 6536 6 699 195 42 0 0 chr15 14952925 14952949 -88542025 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 6 699 1442 161 72 48 chr15 14952949 14953157 -88541817 - Lx LINE L1 -119 6535 6309 6 699 2812 108 10 0 chr15 14953716 14954132 -88540842 - BGLII LTR ERVK 0 421 2 6 699 185 0 40 0 chr15 14954167 14954192 -88540782 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 699 1602 52 0 0 chr15 14954192 14954385 -88540589 - B2_Mm1t SINE B2 0 193 1 6 699 507 311 74 7 chr15 14954781 14955050 -88539924 - Lx8 LINE L1 -281 7192 6906 6 699 182 105 26 0 chr15 14956539 14956577 -88538397 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 699 213 266 15 15 chr15 14956636 14956701 -88538273 + GA-rich Low_complexity Low_complexity 3 67 0 6 699 12123 82 35 10 chr15 14956778 14957289 -88537685 - RLTR22_Mus LTR ERVK -6 1802 1292 6 699 531 126 0 0 chr15 14957289 14957384 -88537590 + (CA)n Simple_repeat Simple_repeat 2 96 0 6 699 12123 82 35 10 chr15 14957384 14958630 -88536344 - RLTR22_Mus LTR ERVK -517 1291 3 6 699 618 220 148 0 chr15 14958871 14959053 -88535921 + Lx8 LINE L1 7041 7249 -224 6 699 432 351 43 0 chr15 14959269 14959480 -88535494 + Lx8 LINE L1 7121 7340 -133 6 699 2023 178 39 6 chr15 14959543 14959905 -88535069 + MTC LTR MaLR 1 374 -47 6 699 776 303 60 8 chr15 14960843 14961242 -88533732 + Lx9 LINE L1 7074 7493 -151 6 699 791 196 32 76 chr15 14961290 14961539 -88533435 - RMER16 LTR ERVK 0 533 296 6 699 361 218 139 95 chr15 14961539 14961676 -88533298 - RMER16 LTR ERVK -177 356 214 6 699 265 243 13 39 chr15 14961644 14961721 -88533253 - RMER16 LTR ERVK -458 75 1 6 699 31137 76 15 2 chr15 14961860 14967954 -88527020 - L1Md_F2 LINE L1 -13 6569 392 6 699 25 31 0 0 chr15 14968279 14968311 -88526663 + AT_rich Low_complexity Low_complexity 1 32 0 6 699 249 407 105 14 chr15 14968319 14968538 -88526436 - MLT1E2 LTR MaLR -65 562 324 6 699 360 0 0 0 chr15 14968568 14968608 -88526366 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 699 285 100 0 0 chr15 14968609 14968659 -88526315 + (GA)n Simple_repeat Simple_repeat 1 50 0 6 699 2820 49 0 3 chr15 14968772 14969119 -88525855 + ORR1A0 LTR MaLR 1 346 0 6 699 23 68 0 0 chr15 14969676 14969720 -88525254 + AT_rich Low_complexity Low_complexity 1 44 0 6 699 21 71 0 0 chr15 14970933 14970975 -88523999 + AT_rich Low_complexity Low_complexity 1 42 0 6 699 312 27 0 0 chr15 14971288 14971325 -88523649 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 6 699 720 350 110 26 chr15 14971947 14972555 -88522419 + MLT2B5 LTR ERVL 3 661 -56 6 699 7674 48 3 2 chr15 14973207 14974404 -88520570 - L1Md_F2 LINE L1 0 6582 5385 6 699 479 176 42 69 chr15 14974681 14974870 -88520104 - RMER17C LTR ERVK -136 274 91 6 699 24 0 0 0 chr15 14975619 14975643 -88519331 + AT_rich Low_complexity Low_complexity 1 24 0 6 699 26 0 0 0 chr15 14975901 14975927 -88519047 + AT_rich Low_complexity Low_complexity 1 26 0 6 699 183 80 0 0 chr15 14976830 14976855 -88518119 + (TAGA)n Simple_repeat Simple_repeat 2 26 0 6 699 180 182 0 0 chr15 14976856 14976900 -88518074 + GA-rich Low_complexity Low_complexity 2 45 0 6 699 2263 74 48 0 chr15 14977348 14977658 -88517316 + L1_Mus1 LINE L1 6243 6567 0 6 699 275 318 64 12 chr15 14977895 14978111 -88516863 + L1M2 LINE L1 5564 5793 -396 6 699 1916 109 28 22 chr15 14978357 14978677 -88516297 - RLTRETN_Mm LTR ERVK 0 322 1 6 699 13088 44 6 16 chr15 14978677 14981163 -88513811 - ETnERV-int LTR ERVK 0 3314 949 6 699 1848 132 231 60 chr15 14981163 14981631 -88513343 - RLTR6_Mm LTR ERV1 -70 584 37 6 699 231 230 211 39 chr15 14981633 14981737 -88513237 - RLTR6_Mm LTR ERV1 -532 122 1 6 699 58400 38 13 0 chr15 14981737 14989339 -88505635 - RLTR6-int LTR ERV1 0 7778 1 6 699 2018 131 249 32 chr15 14989340 14989806 -88505168 - RLTR6_Mm LTR ERV1 -51 603 37 6 699 231 230 211 39 chr15 14989808 14989912 -88505062 - RLTR6_Mm LTR ERV1 -532 122 1 6 699 7994 19 0 3 chr15 14989912 14990867 -88504107 - ETnERV-int LTR ERVK -2362 952 1 6 699 1897 112 28 22 chr15 14990867 14991187 -88503787 - RLTRETN_Mm LTR ERVK 0 322 1 6 699 22250 70 1 3 chr15 14992350 14996218 -88498756 - L1Md_F2 LINE L1 -14 6568 2708 6 699 5922 121 82 2 chr15 14996211 14997201 -88497773 - L1Md_F2 LINE L1 -5450 1166 98 6 699 601 164 0 0 chr15 14997199 14997315 -88497659 - L1Md_F LINE L1 -6190 329 214 6 699 2062 207 67 44 chr15 14997889 14998589 -88496385 + ORR1A2 LTR MaLR 1 419 0 6 699 1450 218 59 24 chr15 15000119 15000458 -88494516 + ORR1B2 LTR MaLR 17 367 0 1 699 1054 259 58 10 chr15 15000594 15000938 -88494036 + L1_Mur3 LINE L1 42 388 -7340 2 699 1813 236 60 25 chr15 15000923 15001627 -88493347 + L1_Mur3 LINE L1 712 1451 -4429 2 699 1881 226 31 33 chr15 15001610 15002091 -88492883 - Lx5 LINE L1 -775 6275 5796 3 699 1170 301 94 28 chr15 15002086 15002588 -88492386 + Lx5 LINE L1 6272 6806 -244 3 699 279 273 49 180 chr15 15002594 15002777 -88492197 + ORR1B1 LTR MaLR 78 236 -158 4 699 1618 221 82 19 chr15 15002777 15003142 -88491832 - Lx5 LINE L1 -128 6922 6535 5 699 1295 160 41 22 chr15 15003141 15003409 -88491565 + L1_Mur2 LINE L1 4234 4506 -1371 6 699 2912 138 47 21 chr15 15003411 15003533 -88491441 + L1_Mur2 LINE L1 3098 3218 -2659 7 699 444 19 0 0 chr15 15003533 15003586 -88491388 + (GA)n Simple_repeat Simple_repeat 2 54 0 8 699 2912 138 47 21 chr15 15003586 15004040 -88490934 + L1_Mur2 LINE L1 3219 3688 -2189 7 699 242 204 0 36 chr15 15004317 15004373 -88490601 + L1_Mur3 LINE L1 1517 1570 -4307 2 699 1335 160 0 33 chr15 15004408 15004653 -88490321 + RMER6D LTR ERVK 113 349 -371 9 699 5250 223 58 32 chr15 15004666 15005173 -88489801 + L1_Mur3 LINE L1 2096 2643 -3237 2 699 414 0 0 0 chr15 15005173 15005219 -88489755 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 699 5250 223 58 32 chr15 15005219 15006322 -88488652 + L1_Mur3 LINE L1 2644 3747 -2133 2 699 1633 247 29 69 chr15 15006451 15006737 -88488237 - L1_Mur3 LINE L1 -770 5110 4830 1 699 3923 174 16 16 chr15 15006737 15007477 -88487497 - Lx2 LINE L1 -1 6996 6257 1 699 1633 247 29 69 chr15 15007477 15007697 -88487277 - L1_Mur3 LINE L1 -1051 4829 4626 1 699 342 0 0 0 chr15 15007697 15007735 -88487239 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 699 1633 247 29 69 chr15 15007735 15007775 -88487199 - L1_Mur3 LINE L1 -1255 4625 4586 1 699 2737 90 25 17 chr15 15007777 15008183 -88486791 + RLTR9E LTR ERVK 1 409 0 1 699 990 235 137 20 chr15 15008184 15008527 -88486447 + ETnERV2-int LTR ERVK 2 384 -2930 1 699 5076 138 72 23 chr15 15008544 15009512 -88485462 + ETnERV2-int LTR ERVK 1071 2086 -5320 1 699 5331 143 41 22 chr15 15009536 15010543 -88484431 + ETnERV2-int LTR ERVK 1995 3448 -3958 1 699 3046 100 24 7 chr15 15010770 15011222 -88483752 + ETnERV2-int LTR ERVK 3441 3900 -3506 1 699 2418 199 34 70 chr15 15011214 15012327 -88482647 + MMETn-int LTR ERVK 1989 3141 -1703 1 699 744 289 154 40 chr15 15012347 15012743 -88482231 - RLTR45 LTR ERVK 0 482 42 1 699 1039 241 22 136 chr15 15012808 15013003 -88481971 - MMETn-int LTR ERVK -483 4361 4173 1 699 228 146 0 0 chr15 15013003 15013044 -88481930 + PB1 SINE Alu 19 59 -68 1 699 1039 241 22 136 chr15 15013044 15013270 -88481704 - MMETn-int LTR ERVK -483 4172 3953 1 699 3358 325 73 60 chr15 15013288 15017837 -88477137 - RNERVK23-int LTR ERVK -420 7797 3333 1 699 486 0 0 0 chr15 15017837 15017891 -88477083 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 699 3358 331 75 60 chr15 15017891 15018548 -88476426 - RNERVK23-int LTR ERVK -4885 3332 2662 1 699 259 212 15 139 chr15 15018869 15019006 -88475968 - RLTR45-int LTR ERVK -6213 1031 912 2 699 253 311 0 0 chr15 15019003 15019093 -88475881 - RNERVK23-int LTR ERVK -5336 1917 1828 1 699 489 250 8 8 chr15 15019241 15019366 -88475608 - RNERVK23-int LTR ERVK -6427 817 693 1 699 644 194 0 0 chr15 15019714 15019838 -88475136 - RNERVK23-int LTR ERVK -6552 692 569 1 699 1157 288 19 8 chr15 15020563 15020924 -88474050 - RNERVK23-int LTR ERVK -6749 495 131 1 699 840 113 16 8 chr15 15020985 15021110 -88473864 + ETnERV3-int LTR ERVK 5651 5776 -32 2 699 1681 176 40 19 chr15 15021129 15021642 -88473332 + RLTR13D6 LTR ERVK 1 539 -363 2 699 252 51 0 114 chr15 15021642 15021686 -88473288 + ETnERV2-int LTR ERVK 7368 7406 0 2 699 2580 98 32 15 chr15 15021686 15022088 -88472886 + RLTR9E LTR ERVK 1 409 0 2 699 380 183 37 0 chr15 15022117 15022199 -88472775 - L1_Mur3 LINE L1 -1322 4558 4474 2 699 249 109 0 0 chr15 15022892 15022938 -88472036 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 2 699 21 0 0 0 chr15 15023460 15023481 -88471493 + AT_rich Low_complexity Low_complexity 1 21 0 2 699 1655 232 68 71 chr15 15024631 15025319 -88469655 + RLTR40 LTR ERVK 19 704 -113 2 699 1827 137 111 16 chr15 15025742 15026121 -88468853 - RLTR9F LTR ERVK 0 415 1 2 699 323 193 182 0 chr15 15026841 15026929 -88468045 - Lx9 LINE L1 -8 7636 7533 2 699 405 0 0 0 chr15 15026933 15026978 -88467996 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 699 270 0 0 0 chr15 15026978 15027007 -88467967 + (GA)n Simple_repeat Simple_repeat 2 31 0 3 699 2485 189 28 30 chr15 15027710 15028283 -88466691 + Lx3C LINE L1 6002 6573 -403 3 699 826 222 78 0 chr15 15028281 15028461 -88466513 + Lx3C LINE L1 6781 6974 -2 3 699 239 190 17 0 chr15 15028957 15029015 -88465959 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 699 523 304 41 35 chr15 15029215 15029550 -88465424 - L1_Rod LINE L1 -1080 5063 4666 3 699 372 94 0 0 chr15 15029569 15029622 -88465352 + (TTTA)n Simple_repeat Simple_repeat 4 56 0 3 699 242 190 0 17 chr15 15029622 15029681 -88465293 - L1_Rod LINE L1 -1446 4697 4640 3 699 4526 139 33 3 chr15 15029694 15030450 -88464524 - Lx3_Mus LINE L1 -16 6993 6215 3 699 1893 111 56 47 chr15 15030450 15030512 -88464462 + Lx3_Mus LINE L1 5847 5910 -1099 3 699 627 26 0 0 chr15 15030512 15030589 -88464385 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 699 1893 111 56 47 chr15 15030589 15030612 -88464362 + Lx3_Mus LINE L1 5911 5927 -1082 3 699 1796 137 112 92 chr15 15030612 15031078 -88463896 + IAPLTR2_Mm LTR ERVK 1 475 0 3 699 1893 111 56 47 chr15 15031078 15031091 -88463883 + Lx3_Mus LINE L1 5928 5934 -1075 3 699 3659 10 0 0 chr15 15031091 15031504 -88463470 + L1Md_A LINE L1 6170 6582 0 3 699 1893 111 56 47 chr15 15031504 15031763 -88463211 + Lx3_Mus LINE L1 5935 6208 -801 3 699 189 0 0 0 chr15 15032076 15032097 -88462877 + (A)n Simple_repeat Simple_repeat 1 21 0 4 699 508 87 0 0 chr15 15032955 15033024 -88461950 + Lx3_Mus LINE L1 6680 6748 -261 3 699 244 317 39 52 chr15 15033090 15033243 -88461731 + Lx8 LINE L1 7049 7199 -274 4 699 2112 245 24 59 chr15 15033632 15034208 -88460766 - RMER2 LTR ERV1 -11 556 1 4 699 246 128 0 0 chr15 15036188 15036227 -88458747 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 699 2073 201 100 2 chr15 15037044 15037627 -88457347 - Lx4A LINE L1 -1 7057 6418 4 699 1369 155 15 127 chr15 15037650 15037794 -88457180 - L1_Mur2 LINE L1 -6100 612 495 4 699 2030 136 3 6 chr15 15037794 15038106 -88456868 + RLTR10E LTR ERVK 1 311 0 4 699 1369 155 15 127 chr15 15038106 15038300 -88456674 - L1_Mur2 LINE L1 -6218 494 312 4 699 752 138 8 0 chr15 15038305 15038435 -88456539 + (TTCTC)n Simple_repeat Simple_repeat 3 133 0 4 699 477 0 0 0 chr15 15038435 15038488 -88456486 + (TTTC)n Simple_repeat Simple_repeat 4 56 0 4 699 2319 202 57 43 chr15 15038505 15038668 -88456306 + RLTR25A LTR ERVK 513 686 -417 4 699 468 0 0 0 chr15 15038668 15038720 -88456254 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 699 2319 202 57 43 chr15 15038720 15039139 -88455835 + RLTR25A LTR ERVK 687 1102 -1 4 699 964 167 11 0 chr15 15039147 15039333 -88455641 - L1_Mur2 LINE L1 -6468 244 57 4 699 21 100 0 0 chr15 15039667 15039737 -88455237 + AT_rich Low_complexity Low_complexity 1 70 0 5 699 285 353 93 36 chr15 15040112 15040306 -88454668 + B3 SINE B2 1 205 -11 5 699 735 196 13 40 chr15 15040385 15040534 -88454440 - B1_Mur4 SINE Alu 0 150 6 5 699 350 288 82 18 chr15 15041906 15042076 -88452898 - MTE2a LTR MaLR -2 377 197 5 699 230 277 57 38 chr15 15042274 15042379 -88452595 + L1M2 LINE L1 4925 5031 -1112 5 699 360 0 0 0 chr15 15043282 15043322 -88451652 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 699 1760 163 28 37 chr15 15043697 15044022 -88450952 - ORR1A3 LTR MaLR -2 324 3 5 699 235 390 90 5 chr15 15044363 15044551 -88450423 - Charlie2a DNA MER1_type -2656 205 2 5 699 267 103 0 0 chr15 15044898 15044937 -88450037 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 5 699 1924 131 34 34 chr15 15045133 15045458 -88449516 - ORR1A2 LTR MaLR -2 325 1 6 699 882 0 0 0 chr15 15045531 15045629 -88449345 + (TTC)n Simple_repeat Simple_repeat 3 100 0 6 699 342 0 0 0 chr15 15045629 15045667 -88449307 + (TC)n Simple_repeat Simple_repeat 2 39 0 6 699 733 314 59 62 chr15 15045961 15046425 -88448549 - Lx8 LINE L1 -441 7032 6563 6 699 4027 168 93 3 chr15 15046462 15047192 -88447782 - Lx2B LINE L1 -1 6999 6204 6 699 383 320 75 29 chr15 15047306 15047680 -88447294 - L1_Rod LINE L1 -168 5679 5289 6 699 1851 273 72 17 chr15 15048043 15048586 -88446388 + Lx6 LINE L1 6762 7334 -126 6 699 371 21 21 0 chr15 15048591 15048639 -88446335 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 699 324 70 0 0 chr15 15048651 15048694 -88446280 + (TA)n Simple_repeat Simple_repeat 2 44 0 6 699 405 58 0 0 chr15 15048694 15048746 -88446228 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 699 22 56 0 0 chr15 15049556 15049592 -88445382 + AT_rich Low_complexity Low_complexity 1 36 0 7 699 1037 228 103 55 chr15 15050669 15051017 -88443957 + ORR1D1 LTR MaLR 1 365 -9 7 699 229 246 0 0 chr15 15051307 15051364 -88443610 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 699 489 71 0 0 chr15 15051374 15051444 -88443530 + (TC)n Simple_repeat Simple_repeat 2 71 0 7 699 23 0 0 0 chr15 15052089 15052112 -88442862 + AT_rich Low_complexity Low_complexity 1 23 0 7 699 797 241 80 10 chr15 15052691 15052892 -88442082 + SSU-rRNA_Hsa rRNA rRNA 450 664 -1205 7 699 6798 162 21 23 chr15 15052878 15054350 -88440624 + Lx LINE L1 5519 6996 -1 7 699 2000 159 17 14 chr15 15056034 15056379 -88438595 + ORR1A1 LTR MaLR 1 346 0 7 699 32343 86 12 9 chr15 15059246 15063863 -88431111 - L1Md_F2 LINE L1 0 6582 1978 7 699 471 18 0 0 chr15 15063863 15063919 -88431055 + (TTG)n Simple_repeat Simple_repeat 2 57 0 7 699 32343 114 24 16 chr15 15063919 15065589 -88429385 - L1Md_F2 LINE L1 -3906 1977 277 7 699 1487 151 4 4 chr15 15065589 15065835 -88429139 - L1VL1 LINE L1 -6156 266 21 8 699 300 317 83 37 chr15 15066188 15066296 -88428678 + RSINE1 SINE B4 45 157 -8 8 699 459 378 79 3 chr15 15066860 15067216 -88427758 - Lx8 LINE L1 -150 7323 6941 8 699 309 245 147 0 chr15 15067225 15067327 -88427647 - Lx8 LINE L1 -312 7161 7045 8 699 691 307 52 5 chr15 15067338 15067551 -88427423 - MTD LTR MaLR -196 223 1 8 699 393 278 108 126 chr15 15068708 15068922 -88426052 + MTE2a LTR MaLR 156 365 -14 8 699 1135 82 0 0 chr15 15070330 15070476 -88424498 + B1_Mus1 SINE Alu 2 147 -1 8 699 233 89 22 0 chr15 15070476 15070521 -88424453 + (CAAA)n Simple_repeat Simple_repeat 1 46 0 8 699 359 350 89 35 chr15 15071592 15071761 -88423213 + B3A SINE B2 5 182 -16 8 699 1122 242 178 22 chr15 15072087 15072442 -88422532 - RMER20B LTR ERVK -205 422 13 8 699 301 274 14 0 chr15 15072459 15072532 -88422442 - L1MEg LINE L1 -4130 1954 1881 9 87 1631 184 256 46 chr15 15072747 15073317 -88421657 - RMER6C LTR ERVK 0 690 1 9 700 4475 127 16 8 chr15 15073485 15074194 -88420780 - Lx3_Mus LINE L1 -16 6993 6280 9 700 28 0 0 0 chr15 15074495 15074523 -88420451 + AT_rich Low_complexity Low_complexity 1 28 0 9 700 267 408 0 62 chr15 15074585 15074713 -88420261 - B3 SINE B2 -89 127 8 9 700 846 168 7 7 chr15 15074748 15074892 -88420082 - B1_Mus1 SINE Alu -1 147 4 9 700 34 0 0 0 chr15 15074978 15075012 -88419962 + AT_rich Low_complexity Low_complexity 1 34 0 9 700 650 219 121 29 chr15 15075323 15075530 -88419444 - URR1A DNA MER1_type 0 226 1 9 700 227 79 0 26 chr15 15078005 15078044 -88416930 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 9 700 273 57 0 0 chr15 15079135 15079170 -88415804 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 700 29 47 0 0 chr15 15079795 15079838 -88415136 + AT_rich Low_complexity Low_complexity 1 43 0 1 700 577 281 151 16 chr15 15079847 15080296 -88414678 - L1M2 LINE L1 -920 5223 4714 1 700 23 33 0 0 chr15 15080766 15080796 -88414178 + AT_rich Low_complexity Low_complexity 1 30 0 1 700 261 305 97 71 chr15 15080856 15080969 -88414005 - RSINE1 SINE B4 -33 132 17 1 700 477 0 0 0 chr15 15081204 15081257 -88413717 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 700 886 250 86 0 chr15 15081519 15081751 -88413223 - ORR1D1 LTR MaLR -122 252 1 1 700 790 339 102 38 chr15 15081767 15082267 -88412707 - MTE-int LTR MaLR -940 640 109 1 700 273 75 0 0 chr15 15082370 15082410 -88412564 + (TTTG)n Simple_repeat Simple_repeat 3 42 0 1 700 8657 14 0 0 chr15 15082417 15083397 -88411577 - L1Md_A LINE L1 0 6582 5603 1 700 928 19 0 0 chr15 15083396 15083502 -88411472 + L1Md_A LINE L1 5472 5577 -306 1 700 314 241 26 63 chr15 15084394 15084441 -88410533 - RLTR25B LTR ERVK -516 587 487 1 700 737 53 0 0 chr15 15084441 15084536 -88410438 - B1_Mus2 SINE Alu -8 139 45 1 700 314 241 26 63 chr15 15084536 15084551 -88410423 - RLTR25B LTR ERVK -516 486 451 1 700 39 22 0 0 chr15 15086064 15086110 -88408864 + AT_rich Low_complexity Low_complexity 1 46 0 1 700 438 325 104 12 chr15 15086145 15086394 -88408580 + B4 SINE B4 1 272 -20 1 700 203 203 0 17 chr15 15086466 15086526 -88408448 + CT-rich Low_complexity Low_complexity 3 61 0 1 700 6888 179 60 5 chr15 15086671 15088661 -88406313 - Lx2 LINE L1 -3 6651 4484 1 700 23 68 0 0 chr15 15088661 15088705 -88406269 + AT_rich Low_complexity Low_complexity 1 44 0 1 700 501 295 53 8 chr15 15089892 15090025 -88404949 + B1_Mur1 SINE Alu 6 144 -5 1 700 346 344 52 58 chr15 15090042 15090233 -88404741 + B3A SINE B2 9 198 0 1 700 952 267 38 101 chr15 15090692 15091059 -88403915 + ORR1C2 LTR MaLR 1 344 -40 1 700 183 50 30 91 chr15 15091060 15091112 -88403862 + T-rich Low_complexity Low_complexity 18 66 0 1 700 1119 75 7 0 chr15 15091112 15091258 -88403716 - B1_Mm SINE Alu 0 147 1 1 700 183 50 30 91 chr15 15091258 15091271 -88403703 + T-rich Low_complexity Low_complexity 5 17 0 1 700 313 120 20 0 chr15 15091280 15091330 -88403644 + ORR1C2 LTR MaLR 334 384 0 1 700 41 0 0 0 chr15 15092080 15092121 -88402853 + AT_rich Low_complexity Low_complexity 1 41 0 1 700 210 163 23 0 chr15 15092504 15092547 -88402427 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 700 17872 173 22 22 chr15 15092784 15095866 -88399108 + Lx2B LINE L1 2213 5292 -594 1 700 396 0 0 0 chr15 15095866 15095910 -88399064 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1 700 17872 171 66 50 chr15 15095910 15096974 -88398000 + Lx2B LINE L1 5293 6369 -631 1 700 1766 202 72 22 chr15 15096979 15097384 -88397590 + Lx2B LINE L1 6572 6996 -4 1 700 456 91 0 0 chr15 15097582 15097648 -88397326 + (CATA)n Simple_repeat Simple_repeat 2 67 0 1 700 198 103 0 0 chr15 15098273 15098302 -88396672 + (T)n Simple_repeat Simple_repeat 1 29 0 1 700 7850 53 7 1 chr15 15098375 15099683 -88395291 - L1Md_F2 LINE L1 -12 6570 5255 1 700 1320 86 5 0 chr15 15099681 15099867 -88395107 - L1Md_F2 LINE L1 -1159 4724 4538 1 700 581 101 101 0 chr15 15099868 15099967 -88395007 + L1Md_F2 LINE L1 6462 6570 -12 1 700 324 330 74 15 chr15 15100465 15100668 -88394306 - LTR50 LTR ERVL -569 226 12 1 700 5408 104 10 84 chr15 15102622 15103548 -88391426 + L1_Mus4 LINE L1 5778 6634 -2 1 700 213 94 0 0 chr15 15103613 15103645 -88391329 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 700 4614 146 50 15 chr15 15104694 15105569 -88389405 - RMER17A2 LTR ERVK 0 906 1 1 700 373 202 228 32 chr15 15105665 15105788 -88389186 + B1_Mur4 SINE Alu 4 150 0 1 700 315 65 0 0 chr15 15105843 15105889 -88389085 + (CAAAA)n Simple_repeat Simple_repeat 5 50 0 1 700 24 0 0 0 chr15 15106888 15106912 -88388062 + AT_rich Low_complexity Low_complexity 1 24 0 1 700 21 0 0 0 chr15 15107572 15107593 -88387381 + AT_rich Low_complexity Low_complexity 1 21 0 1 700 191 114 0 28 chr15 15107866 15107902 -88387072 + (GGA)n Simple_repeat Simple_repeat 2 36 0 1 700 2286 159 5 15 chr15 15108414 15108811 -88386163 + Lx4A LINE L1 5589 5981 -1077 1 700 2113 167 52 10 chr15 15108791 15109178 -88385796 + Lx4A LINE L1 6205 6607 -451 1 700 4909 105 16 19 chr15 15109189 15109939 -88385035 - L1_Mus4 LINE L1 -2 6634 5887 1 700 351 85 0 0 chr15 15109939 15109986 -88384988 + L1_Mus4 LINE L1 5836 5882 -754 1 700 2156 200 38 0 chr15 15109987 15110433 -88384541 + Lx4A LINE L1 6595 7057 -1 1 700 239 226 24 12 chr15 15111299 15111384 -88383590 + (TA)n Simple_repeat Simple_repeat 2 87 0 1 700 26 0 0 0 chr15 15111458 15111484 -88383490 + AT_rich Low_complexity Low_complexity 1 26 0 1 700 650 280 45 22 chr15 15111739 15111918 -88383056 + B3 SINE B2 6 188 -28 1 700 252 0 0 0 chr15 15112013 15112041 -88382933 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1 700 1442 163 122 46 chr15 15112383 15112723 -88382251 - ORR1A4 LTR MaLR -1 393 3 1 700 461 145 26 0 chr15 15112778 15112854 -88382120 - RMER6C LTR ERVK -81 609 532 1 700 387 0 0 0 chr15 15113415 15113458 -88381516 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 700 26 74 0 0 chr15 15113910 15113964 -88381010 + AT_rich Low_complexity Low_complexity 1 54 0 1 700 341 286 139 23 chr15 15114169 15114341 -88380633 + RMER15 LTR ERVL 246 437 -138 1 700 1153 333 48 24 chr15 15116543 15117090 -88377884 - Lx8 LINE L1 -297 7176 6617 1 700 644 0 0 13 chr15 15117934 15118011 -88376963 + (TCTA)n Simple_repeat Simple_repeat 1 76 0 1 700 714 34 0 0 chr15 15118067 15118156 -88376818 + (CA)n Simple_repeat Simple_repeat 2 90 0 1 700 1010 113 0 0 chr15 15118212 15118353 -88376621 - B1_Mus1 SINE Alu -6 142 2 1 700 735 88 0 0 chr15 15119779 15119892 -88375082 + (TG)n Simple_repeat Simple_repeat 2 114 0 1 700 1748 203 108 142 chr15 15120167 15120878 -88374096 - RMER6C LTR ERVK 0 690 4 1 700 1018 217 10 5 chr15 15121733 15121937 -88373037 + Lx4B LINE L1 6327 6531 -527 1 700 1788 94 0 0 chr15 15122050 15122304 -88372670 + L1_Mus1 LINE L1 6314 6567 0 1 700 4677 219 22 4 chr15 15122339 15123319 -88371655 - Lx5 LINE L1 -346 6704 5707 1 700 1210 292 12 28 chr15 15123323 15123750 -88371224 - Lx5 LINE L1 -566 6894 6455 1 700 243 152 0 0 chr15 15123763 15123809 -88371165 + (TTG)n Simple_repeat Simple_repeat 3 48 0 1 700 504 318 47 6 chr15 15123816 15124056 -88370918 - Lx5 LINE L1 -731 6729 6254 1 700 3000 182 58 67 chr15 15124885 15125373 -88369601 - RMER6D LTR ERVK -4 716 208 1 700 2007 118 26 3 chr15 15125373 15125680 -88369294 - Lx2 LINE L1 -1 6996 6683 1 700 3000 182 58 67 chr15 15125680 15125913 -88369061 - RMER6D LTR ERVK -513 207 1 1 700 1154 274 24 27 chr15 15126495 15126829 -88368145 - ORR1D1 LTR MaLR 0 374 42 1 700 648 277 24 6 chr15 15127463 15127630 -88367344 - Lx9 LINE L1 -1053 6591 6422 1 700 267 140 0 0 chr15 15127665 15127715 -88367259 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 700 26 50 0 0 chr15 15127842 15127882 -88367092 + AT_rich Low_complexity Low_complexity 1 40 0 1 700 28 0 0 0 chr15 15128298 15128326 -88366648 + AT_rich Low_complexity Low_complexity 1 28 0 1 700 1177 80 6 11 chr15 15128642 15128818 -88366156 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 1 700 17103 148 32 11 chr15 15128961 15131199 -88363775 - L1_Mus3 LINE L1 -1 6996 4675 1 700 225 24 71 0 chr15 15131199 15131241 -88363733 + (TTG)n Simple_repeat Simple_repeat 2 46 0 1 700 17103 159 13 3 chr15 15131241 15133080 -88361894 - L1_Mus3 LINE L1 -1209 4674 2816 1 700 581 133 99 0 chr15 15133784 15133917 -88361057 - Lx2 LINE L1 -1081 5919 5752 1 700 3661 247 45 4 chr15 15133908 15134812 -88360162 + Lx2B LINE L1 6024 6964 -36 1 700 228 187 95 78 chr15 15134813 15134929 -88360045 - Arthur1B DNA Tip100 -185 1040 923 1 700 436 315 91 19 chr15 15134980 15135169 -88359805 + B3A SINE B2 2 203 -13 1 700 366 23 0 0 chr15 15135207 15135250 -88359724 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 700 975 314 69 36 chr15 15137085 15137634 -88357340 - Lx9 LINE L1 -595 7049 6483 1 700 432 0 0 0 chr15 15137670 15137718 -88357256 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 700 1403 277 68 13 chr15 15137989 15138443 -88356531 - RLTR16 LTR ERVK -26 479 1 1 700 237 65 0 0 chr15 15140615 15140646 -88354328 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 700 360 0 0 0 chr15 15141685 15141725 -88353249 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 700 24 53 0 0 chr15 15142013 15142051 -88352923 + AT_rich Low_complexity Low_complexity 1 38 0 1 700 3794 58 2 6 chr15 15143333 15143823 -88351151 + L1_Mus1 LINE L1 6080 6567 0 1 700 1053 356 68 20 chr15 15143846 15144718 -88350256 - Lx8 LINE L1 -270 7203 6287 1 700 525 236 6 11 chr15 15144890 15145066 -88349908 + (TATATG)n Simple_repeat Simple_repeat 2 176 0 1 700 1976 315 53 23 chr15 15145282 15146144 -88348830 - Lx7 LINE L1 -384 7312 6425 1 700 285 395 53 53 chr15 15146185 15146372 -88348602 - ORR1D2 LTR MaLR -173 197 11 1 700 3330 67 0 0 chr15 15147934 15148398 -88346576 + L1Md_F2 LINE L1 5552 6015 -567 1 700 288 0 0 0 chr15 15148435 15148467 -88346507 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1 700 426 327 23 1 chr15 15148793 15148941 -88346033 - MTD LTR MaLR -15 404 267 1 700 21 57 0 0 chr15 15149455 15149490 -88345484 + AT_rich Low_complexity Low_complexity 1 35 0 1 700 452 306 55 30 chr15 15150137 15150336 -88344638 + B3 SINE B2 9 212 -4 1 700 363 314 40 48 chr15 15150397 15150521 -88344453 + B4 SINE B4 1 123 -169 1 700 650 355 49 51 chr15 15150642 15150746 -88344228 + MT2A LTR ERVL 72 176 -357 1 700 617 25 13 0 chr15 15150746 15150825 -88344149 + (TA)n Simple_repeat Simple_repeat 2 81 0 1 700 650 355 49 51 chr15 15150825 15151109 -88343865 + MT2A LTR ERVL 177 458 -75 1 700 246 179 16 82 chr15 15151091 15151152 -88343822 + MLT2B2 LTR ERVL 506 562 0 1 700 2487 191 33 8 chr15 15151377 15151895 -88343079 - Lx4A LINE L1 0 7058 6528 1 700 30 27 0 0 chr15 15152941 15152978 -88341996 + AT_rich Low_complexity Low_complexity 1 37 0 1 700 859 207 122 35 chr15 15153392 15153622 -88341352 + ORR1B2 LTR MaLR 1 250 -117 1 700 1292 241 47 9 chr15 15153649 15153968 -88341006 + ORR1B2-int LTR MaLR 138 468 -1041 1 700 252 182 0 0 chr15 15153968 15154012 -88340962 + Lx6 LINE L1 7399 7442 -18 1 700 22 56 0 0 chr15 15154931 15154967 -88340007 + AT_rich Low_complexity Low_complexity 1 36 0 2 700 192 125 0 0 chr15 15156189 15156221 -88338753 + (A)n Simple_repeat Simple_repeat 1 32 0 2 700 376 353 0 8 chr15 15156882 15157002 -88337972 + ORR1B2 LTR MaLR 6 124 -235 1 700 2175 246 20 29 chr15 15157140 15157831 -88337143 + L1_Mur3 LINE L1 2532 3216 -2664 2 700 1548 241 87 31 chr15 15157835 15158353 -88336621 - RMER6C LTR ERVK -122 568 22 2 700 1033 287 35 6 chr15 15158389 15158732 -88336242 + Lx7 LINE L1 6077 6429 -1267 2 700 318 263 10 40 chr15 15159995 15160094 -88334880 - L1_Mur3 LINE L1 -2007 3873 3778 2 700 462 271 126 31 chr15 15160119 15160365 -88334609 + ORR1D1 LTR MaLR 1 281 -89 2 700 495 290 74 50 chr15 15160411 15160912 -88334062 - L1_Mur3 LINE L1 -2129 3751 3239 2 700 650 75 0 11 chr15 15160916 15161010 -88333964 + (TTCC)n Simple_repeat Simple_repeat 4 96 0 2 700 268 333 103 17 chr15 15161032 15161148 -88333826 - RSINE1 SINE B4 0 165 40 2 700 579 356 42 8 chr15 15161156 15161419 -88333555 + MT2A LTR ERVL 189 460 -73 2 700 770 180 0 22 chr15 15161529 15161711 -88333263 + CT-rich Low_complexity Low_complexity 1 178 0 2 700 451 310 79 43 chr15 15161713 15162273 -88332701 - L1_Mur3 LINE L1 -2843 3300 2697 2 700 1558 189 138 77 chr15 15162371 15163177 -88331797 - RMER6C LTR ERVK -4 716 1 2 700 290 319 141 11 chr15 15163406 15163669 -88331305 - L1_Rod LINE L1 -3459 2388 2092 2 700 234 81 0 0 chr15 15163865 15163902 -88331072 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 700 333 118 0 0 chr15 15163902 15163952 -88331022 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 700 7775 45 20 1 chr15 15164023 15165099 -88329875 - L1Md_F2 LINE L1 -4 6578 5490 2 700 6197 60 1 0 chr15 15165101 15166017 -88328957 + L1Md_A LINE L1 1099 2017 -3866 2 700 207 0 0 0 chr15 15166596 15166619 -88328355 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 700 59 38 0 0 chr15 15167248 15167328 -88327646 + AT_rich Low_complexity Low_complexity 1 80 0 2 700 1122 68 0 0 chr15 15167559 15167705 -88327269 - B1_Mus1 SINE Alu -1 147 2 2 700 287 82 20 0 chr15 15168055 15168084 -88326890 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 700 297 0 0 0 chr15 15168084 15168117 -88326857 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 700 287 82 20 0 chr15 15168117 15168136 -88326838 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 700 25 51 0 0 chr15 15168140 15168179 -88326795 + AT_rich Low_complexity Low_complexity 1 39 0 2 700 222 149 29 29 chr15 15168512 15168581 -88326393 + (TTTA)n Simple_repeat Simple_repeat 2 70 0 2 700 37 99 0 0 chr15 15168586 15168707 -88326267 + AT_rich Low_complexity Low_complexity 1 121 0 2 700 603 75 9 28 chr15 15169345 15169454 -88325520 + (TTTTC)n Simple_repeat Simple_repeat 2 108 0 2 700 1729 145 116 0 chr15 15169802 15170112 -88324862 - ORR1B2 LTR MaLR -21 346 1 2 700 7036 140 7 2 chr15 15170230 15172025 -88322949 - L1_Mus4 LINE L1 0 6636 4832 2 700 592 202 34 0 chr15 15172027 15172146 -88322828 - L1_Mm LINE L1 -938 4945 4823 2 700 5057 112 9 3 chr15 15172124 15172904 -88322070 - L1_Mm LINE L1 -2107 3776 2992 2 700 1395 265 32 23 chr15 15172900 15173333 -88321641 - L1VL4 LINE L1 -5662 640 204 2 700 264 273 59 29 chr15 15173371 15173507 -88321467 + Lx5 LINE L1 6024 6163 -887 2 700 895 88 16 0 chr15 15173940 15174065 -88320909 - B2_Mm2 SINE B2 -65 130 4 2 700 887 146 29 0 chr15 15174214 15174351 -88320623 + B1_Mus2 SINE Alu 3 143 -4 2 700 1065 236 94 14 chr15 15174584 15174872 -88320102 + ORR1C2 LTR MaLR 73 383 -1 2 700 283 164 18 18 chr15 15175043 15175099 -88319875 + MTE2b LTR MaLR 323 378 -1 2 700 292 183 11 118 chr15 15175099 15175192 -88319782 + Lx9 LINE L1 7390 7472 -172 2 700 306 0 0 0 chr15 15175197 15175231 -88319743 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 700 355 316 109 26 chr15 15175316 15175494 -88319480 + MTE-int LTR MaLR 1334 1527 -53 2 700 506 374 29 83 chr15 15175494 15175844 -88319130 + ORR1E LTR MaLR 1 331 -28 2 700 30 27 0 0 chr15 15175975 15176012 -88318962 + AT_rich Low_complexity Low_complexity 1 37 0 2 700 36 23 0 0 chr15 15176339 15176382 -88318592 + AT_rich Low_complexity Low_complexity 1 43 0 2 700 228 35 0 0 chr15 15177431 15177460 -88317514 + (TA)n Simple_repeat Simple_repeat 2 30 0 2 700 234 372 8 0 chr15 15177878 15177999 -88316975 + Lx8 LINE L1 6818 6939 -534 2 700 570 282 56 47 chr15 15178051 15178285 -88316689 + Lx8 LINE L1 7111 7346 -127 2 700 443 165 52 9 chr15 15178304 15178420 -88316554 - L1_Mur2 LINE L1 -942 4935 4815 2 700 604 220 83 99 chr15 15178441 15178683 -88316291 - Lx5 LINE L1 -5 7045 6808 2 700 476 189 28 9 chr15 15178672 15178779 -88316195 + L1_Mur2 LINE L1 4746 4854 -1023 2 700 882 193 6 0 chr15 15178763 15178934 -88316040 + L1_Mur2 LINE L1 4993 5164 -713 2 700 2342 169 31 0 chr15 15178966 15179379 -88315595 - Lx3C LINE L1 -10 6966 6541 2 700 1207 41 0 0 chr15 15179630 15179777 -88315197 + B1_Mm SINE Alu 1 147 0 2 700 378 0 0 0 chr15 15179794 15179836 -88315138 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 700 450 0 0 0 chr15 15179836 15179885 -88315089 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 700 249 119 0 0 chr15 15179887 15179929 -88315045 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 700 323 87 0 0 chr15 15181278 15181324 -88313650 + (TTTTC)n Simple_repeat Simple_repeat 3 48 0 2 700 531 132 0 0 chr15 15181324 15181415 -88313559 + (TTCC)n Simple_repeat Simple_repeat 2 92 0 2 700 1054 103 7 0 chr15 15181424 15181570 -88313404 - B1_Mus1 SINE Alu 0 148 2 2 700 23 78 0 0 chr15 15181806 15181857 -88313117 + AT_rich Low_complexity Low_complexity 1 51 0 2 700 308 229 31 85 chr15 15182509 15182638 -88312336 - L1MCa LINE L1 -4549 1959 1838 2 700 232 83 0 40 chr15 15184079 15184129 -88310845 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 700 318 67 0 0 chr15 15184171 15184216 -88310758 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 700 1142 299 31 8 chr15 15184276 15184633 -88310341 + Lx6 LINE L1 6912 7276 -184 2 700 1752 118 70 0 chr15 15184688 15184959 -88310015 - ORR1A2 LTR MaLR -37 290 1 2 700 242 298 0 12 chr15 15185021 15185106 -88309868 + GA-rich Low_complexity Low_complexity 1 84 0 2 700 439 324 37 20 chr15 15185179 15185425 -88309549 - Lx7 LINE L1 -1332 6364 6115 2 700 865 85 0 0 chr15 15185953 15186071 -88308903 + Lx3_Mus LINE L1 5796 5913 -1096 2 700 1278 314 88 21 chr15 15186076 15186659 -88308315 - Lx8 LINE L1 -554 6919 6298 2 700 529 261 83 35 chr15 15187227 15187565 -88307409 - L1_Rod LINE L1 -443 5404 5051 2 700 696 195 0 0 chr15 15187619 15187778 -88307196 + (TA)n Simple_repeat Simple_repeat 2 160 0 2 700 199 93 47 0 chr15 15188112 15188155 -88306819 + (GAAA)n Simple_repeat Simple_repeat 4 48 0 2 700 308 348 41 34 chr15 15189021 15189167 -88305807 + B4A SINE B4 128 274 -18 2 700 245 358 18 35 chr15 15189221 15189334 -88305640 - MLT1A0 LTR MaLR -246 119 9 2 700 339 121 0 0 chr15 15189348 15189406 -88305568 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 700 21 0 0 0 chr15 15190023 15190044 -88304930 + AT_rich Low_complexity Low_complexity 1 21 0 2 700 1995 97 30 20 chr15 15190051 15190355 -88304619 + IAPLTR2b LTR ERVK 1 307 -20 2 700 330 291 87 104 chr15 15190897 15191288 -88303686 - L1_Mur3 LINE L1 -717 5580 5196 2 700 1408 178 233 3 chr15 15191288 15191631 -88303343 - BGLII_Mus LTR ERVK 0 422 1 2 700 330 267 51 86 chr15 15191631 15191680 -88303294 - L1_Mur3 LINE L1 -948 5195 5151 2 700 684 215 216 16 chr15 15191704 15191898 -88303076 + ORR1B2 LTR MaLR 92 324 -43 2 700 853 237 16 22 chr15 15192207 15192515 -88302459 + Lx5 LINE L1 889 1181 -6547 2 700 2507 214 34 32 chr15 15192517 15192983 -88301991 + RLTR20B3 LTR ERVK 21 484 -93 2 700 351 0 0 0 chr15 15192983 15193022 -88301952 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 700 468 0 0 0 chr15 15193024 15193076 -88301898 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 700 2507 214 34 32 chr15 15193076 15193162 -88301812 + RLTR20B3 LTR ERVK 485 575 -2 2 700 233 171 0 0 chr15 15193162 15193203 -88301771 + L1Md_F LINE L1 1098 1138 -5381 2 700 2375 195 13 46 chr15 15193170 15193782 -88301192 + Lx5 LINE L1 1203 1794 -4083 2 700 2367 198 65 10 chr15 15193796 15194285 -88300689 - RMER20A LTR ERVK 0 516 1 2 700 2912 199 65 57 chr15 15194289 15195135 -88299839 + Lx5 LINE L1 1810 2662 -3215 2 700 35172 46 0 3 chr15 15195130 15200379 -88294595 + L1Md_T LINE L1 261 5589 -297 2 700 8287 37 0 0 chr15 15200379 15201375 -88293599 + L1Md_T LINE L1 5590 6585 0 2 700 12290 216 43 29 chr15 15201414 15202719 -88292255 + Lx5 LINE L1 2632 3944 -1933 2 700 1353 135 53 12 chr15 15202719 15202966 -88292008 + Lx3_Mus LINE L1 6751 7007 -2 2 700 12290 216 43 29 chr15 15202966 15204316 -88290658 + Lx5 LINE L1 3945 5334 -543 2 87 2288 100 153 10 chr15 15204316 15204709 -88290265 - RLTR44B LTR ERVK 0 449 1 2 701 12290 216 43 29 chr15 15204709 15204837 -88290137 + Lx5 LINE L1 5335 5450 -427 2 701 1065 94 0 0 chr15 15204837 15204975 -88289999 + B1_Mus1 SINE Alu 2 139 -9 2 701 257 0 30 0 chr15 15204975 15205008 -88289966 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2 701 12290 247 48 19 chr15 15205008 15206240 -88288734 + Lx5 LINE L1 5451 6727 -323 2 701 415 341 126 40 chr15 15206362 15206640 -88288334 - MLT2B4 LTR ERVL -199 357 56 2 701 711 83 0 0 chr15 15206938 15207046 -88287928 + (TG)n Simple_repeat Simple_repeat 1 108 0 2 701 2865 190 37 20 chr15 15207200 15207795 -88287179 - RLTR1D LTR ERV1 0 605 1 2 701 7196 56 1 4 chr15 15207992 15208894 -88286080 - L1Md_F2 LINE L1 -12 6570 5672 2 701 322 357 65 44 chr15 15208996 15209424 -88285550 - Lx9 LINE L1 -272 7372 6936 2 701 1751 218 38 18 chr15 15209440 15209883 -88285091 - Lx4B LINE L1 -6 7052 6601 2 701 2037 233 68 14 chr15 15209882 15210460 -88284514 + Lx5 LINE L1 5752 6360 -690 2 701 336 364 37 16 chr15 15210463 15210653 -88284321 - Lx9 LINE L1 -1093 6551 6358 2 701 403 311 21 21 chr15 15210791 15210985 -88283989 - Lx9 LINE L1 -1671 5973 5780 2 701 1176 54 0 0 chr15 15212192 15212339 -88282635 - B1_Mm SINE Alu 0 147 1 2 701 229 321 0 0 chr15 15212343 15212399 -88282575 + B3 SINE B2 58 113 -103 2 701 1972 184 91 105 chr15 15212403 15212746 -88282228 - RLTR21 LTR ERVK 0 1572 1244 2 701 261 83 0 0 chr15 15212746 15212782 -88282192 + (CATA)n Simple_repeat Simple_repeat 2 37 0 2 701 1972 184 91 105 chr15 15212782 15212928 -88282046 - RLTR21 LTR ERVK -329 1243 1089 2 701 2237 190 96 30 chr15 15212928 15213428 -88281546 - RMER16 LTR ERVK 0 533 1 2 701 1972 125 0 200 chr15 15213428 15213461 -88281513 - RLTR21 LTR ERVK -484 1088 1066 2 701 298 274 0 14 chr15 15213477 15213625 -88281349 + (TA)n Simple_repeat Simple_repeat 2 147 0 2 701 442 256 167 105 chr15 15213625 15213850 -88281124 - RLTR21 LTR ERVK -266 1306 1094 2 701 222 37 0 0 chr15 15213850 15213877 -88281097 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 701 442 256 167 105 chr15 15213877 15213956 -88281018 - RLTR21 LTR ERVK -479 1093 983 2 701 2699 216 32 13 chr15 15214002 15214631 -88280343 - Lx3C LINE L1 -2 6974 6334 3 701 1260 154 14 9 chr15 15214631 15214854 -88280120 - RLTR21 LTR ERVK -1008 564 341 2 701 811 144 0 0 chr15 15214864 15214996 -88279978 - RLTR17 LTR ERVK -88 604 473 3 701 1627 164 39 7 chr15 15214995 15215278 -88279696 - RLTR17 LTR ERVK -400 292 1 3 701 1212 159 93 0 chr15 15215329 15215555 -88279419 - RLTR21 LTR ERVK -1325 247 1 2 701 274 359 88 23 chr15 15215561 15215732 -88279242 + Lx9 LINE L1 6441 6622 -1022 3 701 609 369 14 35 chr15 15215754 15216122 -88278852 + Lx8 LINE L1 6646 7005 -468 3 701 310 188 49 28 chr15 15216399 15216541 -88278433 + (TATATG)n Simple_repeat Simple_repeat 5 149 0 3 701 1192 348 50 14 chr15 15216839 15217477 -88277497 + Lx7 LINE L1 6635 7295 -401 3 701 208 234 10 50 chr15 15217619 15217718 -88277256 + A-rich Low_complexity Low_complexity 2 96 0 3 701 288 397 26 21 chr15 15217855 15218089 -88276885 + MLT1D LTR MaLR 3 237 -268 3 701 1886 225 41 10 chr15 15219841 15220352 -88274622 + RLTR11A2 LTR ERVK 1 527 0 3 701 227 277 97 9 chr15 15220766 15220879 -88274095 + Cheshire DNA MER1_type 466 588 -1832 3 701 313 278 10 62 chr15 15221086 15221182 -88273792 + RMER12 LTR ERVK 1232 1322 0 3 701 1218 308 68 27 chr15 15221719 15222082 -88272892 + Lx5 LINE L1 6541 6903 -147 3 701 399 41 0 0 chr15 15222082 15222131 -88272843 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 701 1218 308 68 27 chr15 15222131 15222207 -88272767 + Lx5 LINE L1 6904 6998 -52 3 701 594 63 0 0 chr15 15222215 15222294 -88272680 + (GA)n Simple_repeat Simple_repeat 1 79 0 3 701 675 219 13 20 chr15 15222471 15222620 -88272354 + B1_Mur3 SINE Alu 2 149 0 3 701 2562 205 19 68 chr15 15223130 15223744 -88271230 - RMER1B Other Other -3 1063 480 3 701 22 35 0 0 chr15 15223747 15223776 -88271198 + AT_rich Low_complexity Low_complexity 1 29 0 3 701 1629 229 48 12 chr15 15223875 15224295 -88270679 + Lx9 LINE L1 6989 7423 -221 3 701 860 256 142 42 chr15 15224554 15224933 -88270041 + MTD LTR MaLR 3 419 0 3 701 22 80 0 0 chr15 15225653 15225703 -88269271 + AT_rich Low_complexity Low_complexity 1 50 0 3 701 3118 138 12 2 chr15 15225748 15226242 -88268732 + Lx3A LINE L1 6476 6974 -7 3 701 23 0 0 0 chr15 15226244 15226267 -88268707 + AT_rich Low_complexity Low_complexity 1 23 0 3 701 702 341 112 42 chr15 15226571 15227027 -88267947 - Lx8 LINE L1 -65 7408 6921 3 701 535 309 16 26 chr15 15227995 15228188 -88266786 + L3 LINE CR1 3524 3714 -775 3 701 21 36 0 0 chr15 15228582 15228610 -88266364 + AT_rich Low_complexity Low_complexity 1 28 0 3 701 566 312 88 21 chr15 15228682 15228875 -88266099 - B3 SINE B2 -5 211 6 3 701 540 316 25 12 chr15 15228941 15229101 -88265873 + ID_B1 SINE B4 1 162 -62 3 701 1515 131 1 52 chr15 15229338 15229626 -88265348 + ORR1A3-int LTR MaLR 1618 1861 -102 3 701 472 295 154 23 chr15 15229978 15230328 -88264646 + L1MCa LINE L1 1446 1841 -4667 3 701 31 0 0 0 chr15 15230379 15230410 -88264564 + AT_rich Low_complexity Low_complexity 1 31 0 3 701 9625 96 6 26 chr15 15231464 15233323 -88261651 - Lx3_Mus LINE L1 -1 7008 5198 3 701 2832 111 97 4 chr15 15233427 15233889 -88261085 - L1_Mus4 LINE L1 -7 6629 6125 3 701 229 82 41 0 chr15 15234036 15234085 -88260889 + (TTTTTG)n Simple_repeat Simple_repeat 5 55 0 3 701 1013 103 0 0 chr15 15234099 15234235 -88260739 - B1_Mus2 SINE Alu -10 137 2 3 701 1022 130 6 0 chr15 15234300 15234477 -88260497 + (TCC)n Simple_repeat Simple_repeat 2 179 0 3 701 321 26 0 0 chr15 15234477 15234515 -88260459 + (TTC)n Simple_repeat Simple_repeat 2 39 0 3 701 252 0 0 0 chr15 15234555 15234583 -88260391 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 3 701 4611 134 16 21 chr15 15234585 15235376 -88259598 - Lx3A LINE L1 -17 6964 6178 3 701 201 167 0 0 chr15 15235565 15235601 -88259373 + T-rich Low_complexity Low_complexity 1 36 0 3 701 260 300 59 10 chr15 15235741 15235842 -88259132 - MIRb SINE MIR -46 222 117 3 701 297 0 0 0 chr15 15236338 15236371 -88258603 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 701 457 348 59 16 chr15 15236864 15237051 -88257923 - B3A SINE B2 -2 196 2 3 701 265 353 32 32 chr15 15237776 15237931 -88257043 - MLT1-int LTR MaLR -668 703 549 3 701 535 118 0 11 chr15 15237942 15238036 -88256938 + L1_Mus4 LINE L1 6537 6629 -7 3 701 21 89 0 0 chr15 15239092 15239148 -88255826 + AT_rich Low_complexity Low_complexity 1 56 0 3 701 201 74 0 0 chr15 15239250 15239277 -88255697 + (CATA)n Simple_repeat Simple_repeat 2 28 0 3 701 207 0 0 0 chr15 15239290 15239313 -88255661 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 701 1511 316 43 20 chr15 15239378 15240011 -88254963 - Lx7 LINE L1 -398 7298 6652 3 701 539 188 10 10 chr15 15240099 15240201 -88254773 - ORR1D-int LTR MaLR -1029 341 240 3 701 311 405 39 7 chr15 15242345 15242499 -88252475 - RSINE1 SINE B4 0 165 7 3 701 2849 191 13 11 chr15 15242939 15243470 -88251504 + L1VL4 LINE L1 8 539 -5763 3 701 15753 166 13 39 chr15 15243468 15247735 -88247239 + L1_Mus4 LINE L1 2475 6631 -5 3 701 24 0 0 0 chr15 15248117 15248141 -88246833 + AT_rich Low_complexity Low_complexity 1 24 0 3 701 21 0 0 0 chr15 15248516 15248537 -88246437 + AT_rich Low_complexity Low_complexity 1 21 0 3 701 324 0 0 0 chr15 15249641 15249677 -88245297 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 701 394 228 35 9 chr15 15250032 15250147 -88244827 - Lx7 LINE L1 0 7696 7579 3 701 581 204 82 27 chr15 15250162 15250308 -88244666 - Lx7 LINE L1 -483 7213 7060 3 701 293 286 22 60 chr15 15250544 15250566 -88244408 + MER67D LTR ERV1 47 68 -446 3 701 5537 61 1 12 chr15 15250566 15251295 -88243679 + L1Md_F3 LINE L1 5862 6582 -2 3 701 293 286 22 60 chr15 15251295 15251406 -88243568 + MER67D LTR ERV1 69 175 -339 3 701 282 402 57 45 chr15 15251669 15251914 -88243060 + MLT1E2 LTR MaLR 329 576 -51 3 701 1011 221 124 17 chr15 15251949 15252099 -88242875 - Lx9 LINE L1 -1 7643 7463 3 701 252 0 0 0 chr15 15252099 15252127 -88242847 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 701 261 57 0 0 chr15 15252127 15252161 -88242813 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 701 1011 221 124 17 chr15 15252161 15252364 -88242610 - Lx9 LINE L1 -182 7462 7252 3 701 1122 246 39 11 chr15 15252361 15252644 -88242330 - Lx9 LINE L1 -540 7104 6814 3 701 1530 185 86 21 chr15 15252994 15253555 -88241419 + RMER6D LTR ERVK 1 720 0 3 701 373 336 145 7 chr15 15253561 15253699 -88241275 + B3A SINE B2 3 159 -39 3 701 22 35 0 0 chr15 15253723 15253752 -88241222 + AT_rich Low_complexity Low_complexity 1 29 0 3 701 623 103 0 10 chr15 15253975 15254073 -88240901 + (TTTTC)n Simple_repeat Simple_repeat 3 99 0 3 701 333 0 0 0 chr15 15254247 15254284 -88240690 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 701 798 345 103 56 chr15 15256389 15257193 -88237781 - Lx8 LINE L1 -2 7471 6630 3 701 4503 43 4 2 chr15 15257265 15257821 -88237153 + L1Md_F3 LINE L1 6028 6584 0 3 701 590 298 11 11 chr15 15257935 15258118 -88236856 + MTC LTR MaLR 18 200 -221 3 701 534 289 14 20 chr15 15258160 15258419 -88236555 + Lx9 LINE L1 5683 5974 -1670 3 701 977 105 28 7 chr15 15258648 15258792 -88236182 - B1_Mus1 SINE Alu 0 148 2 3 701 331 0 122 0 chr15 15261130 15261204 -88233770 + (TTTG)n Simple_repeat Simple_repeat 2 84 0 3 701 1083 97 0 0 chr15 15261211 15261356 -88233618 - B1_Mus2 SINE Alu -2 145 1 3 701 350 115 16 0 chr15 15261728 15261789 -88233185 + (AGGGGG)n Simple_repeat Simple_repeat 3 64 0 3 701 351 0 0 0 chr15 15261971 15262010 -88232964 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 3 701 284 361 13 77 chr15 15262437 15262593 -88232381 - B4A SINE B4 -144 148 3 3 701 274 355 14 61 chr15 15262818 15262965 -88232009 - MER3 DNA MER1_type -5 204 65 3 701 446 299 91 34 chr15 15262971 15263210 -88231764 + MER67C LTR ERV1 20 279 -432 3 701 554 340 20 20 chr15 15263503 15263698 -88231276 + B3A SINE B2 3 197 -1 3 701 673 298 159 25 chr15 15264175 15264499 -88230475 - MTD LTR MaLR -14 405 12 3 701 189 121 0 0 chr15 15265155 15265188 -88229786 + (GAAA)n Simple_repeat Simple_repeat 4 36 0 3 701 282 29 0 0 chr15 15266699 15266734 -88228240 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 701 4455 60 0 33 chr15 15268664 15269262 -88225712 + L1Md_F2 LINE L1 5993 6570 -12 3 701 310 309 84 39 chr15 15271728 15271883 -88223091 + MLT1A0 LTR MaLR 157 318 -47 3 701 7889 48 1 7 chr15 15272577 15273675 -88221299 - L1Md_F2 LINE L1 -5 6577 5490 3 701 303 25 0 0 chr15 15273672 15273712 -88221262 + L1Md_F2 LINE L1 5452 5491 -392 3 701 22 56 0 0 chr15 15273831 15273867 -88221107 + AT_rich Low_complexity Low_complexity 1 36 0 3 701 31 26 0 0 chr15 15274002 15274040 -88220934 + AT_rich Low_complexity Low_complexity 1 38 0 3 701 380 328 121 32 chr15 15274978 15275384 -88219590 - Tigger9b DNA MER2_type -40 584 143 3 701 3232 54 0 0 chr15 15276782 15277187 -88217787 - L1Md_F2 LINE L1 -498 6084 5680 3 701 3544 74 6 4 chr15 15277188 15277662 -88217312 + L1Md_F2 LINE L1 6098 6572 -10 3 701 3983 126 16 0 chr15 15277717 15278328 -88216646 + Lx3A LINE L1 6361 6981 0 3 701 492 105 0 0 chr15 15278341 15278417 -88216557 + (GGAA)n Simple_repeat Simple_repeat 2 77 0 3 701 1132 151 9 19 chr15 15278537 15278753 -88216221 - Lx2A LINE L1 0 7008 6795 3 701 423 0 0 0 chr15 15278978 15279025 -88215949 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 3 701 321 259 18 9 chr15 15280039 15280152 -88214822 + L1_Rod LINE L1 5700 5813 -34 3 701 488 214 0 6 chr15 15280759 15280928 -88214046 + CT-rich Low_complexity Low_complexity 2 169 0 3 701 1139 336 40 48 chr15 15281071 15281794 -88213180 - Lx9 LINE L1 -375 7269 6553 3 701 278 330 46 0 chr15 15282005 15282211 -88212763 + MER2 DNA MER2_type 85 339 -6 3 701 29 28 0 0 chr15 15283680 15283716 -88211258 + AT_rich Low_complexity Low_complexity 1 36 0 3 701 256 200 0 16 chr15 15284975 15285036 -88209938 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 701 357 262 134 0 chr15 15286158 15286307 -88208667 - Lx5 LINE L1 -35 7609 7441 4 701 380 304 78 97 chr15 15286378 15286812 -88208162 - L1M2 LINE L1 -1098 5045 4620 4 701 477 90 0 0 chr15 15286814 15286881 -88208093 + (TTCC)n Simple_repeat Simple_repeat 3 69 0 4 701 2991 76 2 2 chr15 15286894 15287288 -88207686 + MTA_Mm LTR MaLR 1 394 -2 4 701 670 307 63 25 chr15 15287289 15287686 -88207288 - L1_Mur3 LINE L1 -1295 4585 4174 4 701 228 135 0 0 chr15 15287925 15287962 -88207012 + (TTTC)n Simple_repeat Simple_repeat 2 38 0 4 701 294 342 67 55 chr15 15288075 15288239 -88206735 - MTE-int LTR MaLR -962 618 453 4 701 185 0 40 0 chr15 15288350 15288375 -88206599 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 701 623 13 13 0 chr15 15288375 15288450 -88206524 + (GA)n Simple_repeat Simple_repeat 2 78 0 4 701 382 311 50 50 chr15 15288549 15288564 -88206410 - MTE-int LTR MaLR -1264 316 303 4 701 675 94 0 0 chr15 15288564 15288660 -88206314 + (GA)n Simple_repeat Simple_repeat 2 97 0 4 701 382 311 50 50 chr15 15288660 15288783 -88206191 - MTE-int LTR MaLR -1278 302 178 4 701 2166 285 63 94 chr15 15288823 15290112 -88204862 - Lx5 LINE L1 -29 7431 5800 4 701 311 296 0 0 chr15 15290226 15290297 -88204677 - L1MEg LINE L1 -4132 1952 1882 4 701 487 278 41 96 chr15 15290309 15290528 -88204446 - MTE2b LTR MaLR 0 379 173 4 701 1520 111 27 0 chr15 15292793 15293018 -88201956 + Lx2B LINE L1 5651 5881 -1119 4 701 600 129 0 11 chr15 15293017 15293111 -88201863 + Lx3C LINE L1 6505 6597 -379 4 701 255 394 60 34 chr15 15293105 15293339 -88201635 + Lx8 LINE L1 7039 7278 -195 4 701 485 156 10 0 chr15 15293662 15293758 -88201216 - Lx2 LINE L1 -2 6995 6899 4 701 1693 169 3 30 chr15 15293774 15294103 -88200871 - Lx3B LINE L1 0 6973 6654 4 701 596 67 0 11 chr15 15294199 15294290 -88200684 + (TCTCCC)n Simple_repeat Simple_repeat 6 95 0 4 701 419 330 9 27 chr15 15294343 15294455 -88200519 - RSINE1 SINE B4 -41 124 15 4 701 1754 227 29 12 chr15 15294524 15294938 -88200036 + MTC LTR MaLR 1 421 0 4 701 333 0 0 0 chr15 15295053 15295090 -88199884 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 701 963 128 0 35 chr15 15295248 15295393 -88199581 - B1_Mus1 SINE Alu -8 140 1 4 701 240 159 0 0 chr15 15295894 15295938 -88199036 + Lx5 LINE L1 5885 5928 -1122 4 701 1081 164 68 5 chr15 15295938 15296128 -88198846 - MTB LTR MaLR 0 400 199 4 701 868 273 113 9 chr15 15296297 15296615 -88198359 - Lx2B LINE L1 -21 6979 6629 4 701 272 333 90 16 chr15 15296881 15297003 -88197971 + B1F1 SINE Alu 10 140 -9 4 701 418 373 35 0 chr15 15297688 15297830 -88197144 - B3A SINE B2 -46 152 6 4 701 432 188 105 50 chr15 15298126 15298317 -88196657 + RMER17D2 LTR ERVK 234 452 -357 4 701 609 273 84 44 chr15 15298317 15298332 -88196642 + ORR1C2 LTR MaLR 174 185 -199 4 701 450 0 0 0 chr15 15298332 15298382 -88196592 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 701 432 188 105 50 chr15 15298382 15298394 -88196580 + RMER17D2 LTR ERVK 453 464 -345 4 701 609 273 84 44 chr15 15298394 15298569 -88196405 + ORR1C2 LTR MaLR 186 384 0 4 701 1058 189 49 32 chr15 15298894 15299297 -88195677 - RMER6B LTR ERVK 0 461 7 4 701 423 56 0 0 chr15 15299305 15299359 -88195615 + (TA)n Simple_repeat Simple_repeat 1 54 0 4 701 4583 8 0 0 chr15 15299698 15300209 -88194765 + L1Md_T LINE L1 6072 6582 0 4 701 441 0 0 0 chr15 15300496 15300545 -88194429 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 701 1108 314 26 36 chr15 15300918 15301447 -88193527 - Lx7 LINE L1 -1048 6648 6125 4 701 1108 296 66 21 chr15 15301410 15301835 -88193139 + Lx7 LINE L1 6657 7100 -596 4 701 297 185 43 21 chr15 15302035 15302129 -88192845 + T-rich Low_complexity Low_complexity 4 99 0 4 701 328 258 152 8 chr15 15302237 15302362 -88192612 - Lx7 LINE L1 -866 6830 6688 4 701 35 24 0 0 chr15 15302466 15302508 -88192466 + AT_rich Low_complexity Low_complexity 1 42 0 4 701 547 325 46 17 chr15 15302985 15303223 -88191751 - RMER15-int LTR ERVL -3841 1158 914 4 701 693 201 70 12 chr15 15303223 15303394 -88191580 + B2_Mm2 SINE B2 1 181 -14 4 701 1546 249 6 8 chr15 15303799 15304155 -88190819 + ORR1C1 LTR MaLR 24 378 0 4 701 324 325 53 35 chr15 15304766 15304935 -88190039 + ORR1C1-int LTR MaLR 186 357 -1013 4 701 284 389 61 45 chr15 15305006 15305316 -88189658 + ORR1C1-int LTR MaLR 828 1142 -438 4 701 212 281 0 35 chr15 15305475 15305560 -88189414 + (CATATA)n Simple_repeat Simple_repeat 2 83 0 4 701 252 372 104 0 chr15 15305869 15306033 -88188941 + MTE-int LTR MaLR 965 1145 -435 4 701 198 0 0 0 chr15 15306127 15306149 -88188825 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 701 214 48 45 45 chr15 15306756 15306800 -88188174 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 4 701 405 39 0 0 chr15 15307629 15307680 -88187294 + (TA)n Simple_repeat Simple_repeat 2 52 0 4 701 186 152 33 17 chr15 15307902 15307962 -88187012 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 701 30 45 0 0 chr15 15308747 15308791 -88186183 + AT_rich Low_complexity Low_complexity 1 44 0 4 701 555 43 0 0 chr15 15309170 15309240 -88185734 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 701 259 100 0 39 chr15 15310834 15310886 -88184088 - Lx3A LINE L1 -1 6980 6931 4 701 5697 129 58 16 chr15 15310884 15311846 -88183128 - Lx3_Mus LINE L1 -364 6645 5643 4 701 21 36 0 0 chr15 15312430 15312458 -88182516 + AT_rich Low_complexity Low_complexity 1 28 0 4 701 469 233 346 0 chr15 15312479 15312638 -88182336 + B3 SINE B2 2 215 -1 4 701 195 184 0 0 chr15 15312645 15312683 -88182291 + (TA)n Simple_repeat Simple_repeat 1 38 0 4 701 2503 91 3 52 chr15 15312759 15313142 -88181832 - L1_Mus2 LINE L1 -6 6560 6197 4 701 1501 85 0 5 chr15 15313142 15313331 -88181643 + L1_Mus2 LINE L1 5999 6187 -379 4 701 387 0 0 0 chr15 15313899 15313942 -88181032 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 701 249 169 0 0 chr15 15314022 15314081 -88180893 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 701 30 0 0 0 chr15 15314304 15314334 -88180640 + AT_rich Low_complexity Low_complexity 1 30 0 4 701 216 236 14 14 chr15 15314444 15314517 -88180457 + (TA)n Simple_repeat Simple_repeat 1 73 0 4 701 234 217 17 0 chr15 15314590 15314650 -88180324 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 701 1069 330 61 47 chr15 15314654 15315456 -88179518 - Lx9 LINE L1 -134 7510 6698 4 701 3897 123 23 32 chr15 15315530 15315677 -88179297 + Lx3A LINE L1 6217 6358 -623 4 701 1080 110 0 0 chr15 15315677 15315823 -88179151 + B1_Mm SINE Alu 1 146 -1 4 701 3897 123 23 32 chr15 15315823 15316328 -88178646 + Lx3A LINE L1 6359 6863 -118 4 701 3213 244 50 1 chr15 15316334 15317020 -88177954 - Lx5 LINE L1 -92 6958 6240 4 701 2238 226 61 10 chr15 15317041 15317672 -88177302 + Lx6 LINE L1 5255 5917 -1543 4 701 3910 63 2 0 chr15 15317672 15318163 -88176811 - L1Md_F2 LINE L1 -17 6565 6074 4 701 1217 235 75 8 chr15 15318163 15318216 -88176758 + Lx6 LINE L1 5918 5969 -1491 4 701 764 242 11 11 chr15 15318210 15318398 -88176576 + Lx7 LINE L1 6135 6322 -1374 4 701 216 97 0 0 chr15 15318407 15318438 -88176536 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 701 471 35 0 0 chr15 15320009 15320066 -88174908 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 701 689 346 37 12 chr15 15320148 15320394 -88174580 - B4A SINE B4 -6 286 35 4 701 527 291 100 79 chr15 15320394 15320739 -88174235 - MTE2a LTR MaLR -2 377 35 4 701 793 172 211 21 chr15 15320741 15320931 -88174043 - URR1A DNA MER1_type 0 226 1 4 701 662 326 30 20 chr15 15321163 15321363 -88173611 + B3 SINE B2 13 214 -2 4 701 32524 92 20 7 chr15 15323360 15329264 -88165710 - L1Md_F2 LINE L1 -6 6576 598 4 701 2079 259 42 55 chr15 15329398 15329504 -88165470 - Lx9 LINE L1 -10 7634 7520 4 701 180 111 0 0 chr15 15329504 15329531 -88165443 + (TA)n Simple_repeat Simple_repeat 2 28 0 4 701 2079 259 42 55 chr15 15329531 15330207 -88164767 - Lx9 LINE L1 -125 7519 6862 4 701 1691 255 61 24 chr15 15330426 15331000 -88163974 - L1_Mur3 LINE L1 -207 5673 5079 4 701 665 184 232 0 chr15 15331007 15331197 -88163777 + L1_Mur3 LINE L1 3969 4202 -1678 4 701 659 306 33 25 chr15 15331882 15332123 -88162851 - ORR1B2 LTR MaLR -104 263 21 4 701 686 154 112 0 chr15 15332126 15332269 -88162705 - Lx4B LINE L1 -384 6674 6516 4 701 1077 200 18 18 chr15 15332267 15332496 -88162478 + Lx4B LINE L1 6808 7036 -22 4 701 393 22 0 0 chr15 15332500 15332546 -88162428 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 701 25 0 0 0 chr15 15332651 15332676 -88162298 + AT_rich Low_complexity Low_complexity 1 25 0 4 701 21 36 0 0 chr15 15333873 15333901 -88161073 + AT_rich Low_complexity Low_complexity 1 28 0 4 701 28 29 0 0 chr15 15333919 15333954 -88161020 + AT_rich Low_complexity Low_complexity 1 35 0 4 701 5356 115 178 6 chr15 15334007 15335232 -88159742 + L1Md_F2 LINE L1 4851 6377 -205 4 87 4338 208 46 57 chr15 15335268 15336958 -88158016 + Lx2 LINE L1 5331 6997 0 4 702 22 35 0 0 chr15 15336962 15336991 -88157983 + AT_rich Low_complexity Low_complexity 1 29 0 4 702 23 0 0 0 chr15 15337309 15337332 -88157642 + AT_rich Low_complexity Low_complexity 1 23 0 4 702 351 0 0 0 chr15 15338221 15338260 -88156714 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 702 953 68 11 48 chr15 15338982 15339168 -88155806 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 4 702 246 174 97 11 chr15 15339203 15339296 -88155678 + (TCTA)n Simple_repeat Simple_repeat 1 101 0 4 702 758 235 29 0 chr15 15339310 15339480 -88155494 - Lx6 LINE L1 -12 7448 7274 4 702 955 266 95 0 chr15 15339486 15339757 -88155217 - Lx6 LINE L1 -592 7104 6800 4 702 665 114 9 0 chr15 15341193 15341307 -88153667 + (TG)n Simple_repeat Simple_repeat 1 115 0 4 702 21 36 0 0 chr15 15342415 15342443 -88152531 + AT_rich Low_complexity Low_complexity 1 28 0 4 702 795 255 35 5 chr15 15342730 15342931 -88152043 + Lx5 LINE L1 6837 7043 -7 4 702 186 43 0 0 chr15 15342948 15342971 -88152003 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 702 6822 117 24 4 chr15 15343022 15344108 -88150866 + Lx LINE L1 5567 6643 -11 4 702 653 212 7 52 chr15 15344414 15344568 -88150406 - B1_Mur4 SINE Alu -1 149 3 4 702 22 0 0 0 chr15 15344697 15344719 -88150255 + AT_rich Low_complexity Low_complexity 1 22 0 4 702 25 0 0 0 chr15 15345382 15345407 -88149567 + AT_rich Low_complexity Low_complexity 1 25 0 5 702 5090 83 14 0 chr15 15345503 15346201 -88148773 - L1_Mus3 LINE L1 -304 6334 5627 5 702 3221 114 128 31 chr15 15346199 15346507 -88148467 - L1_Mm LINE L1 -1196 4687 4322 5 702 4140 32 2 8 chr15 15346507 15347005 -88147969 - L1Md_F3 LINE L1 -1 6583 6089 5 702 3221 114 128 31 chr15 15347005 15347273 -88147701 - L1_Mm LINE L1 -1562 4321 4055 5 702 31754 88 5 5 chr15 15348139 15353366 -88141608 - L1Md_F2 LINE L1 -14 6568 1343 5 702 8474 194 9 11 chr15 15353524 15355129 -88139845 - L1_Mur1 LINE L1 -1491 4395 2794 5 702 303 49 0 0 chr15 15355129 15355170 -88139804 + (TTG)n Simple_repeat Simple_repeat 2 42 0 5 702 8474 194 9 11 chr15 15355170 15355345 -88139629 - L1_Mur1 LINE L1 -3093 2793 2618 5 702 1201 266 70 102 chr15 15355345 15355759 -88139215 - RMER6D LTR ERVK 0 720 332 5 702 5963 191 30 13 chr15 15355759 15356961 -88138013 + Lx2B LINE L1 5771 6992 -8 5 702 1201 266 70 102 chr15 15356961 15357028 -88137946 - RMER6D LTR ERVK -389 331 254 5 702 4718 79 2 0 chr15 15357028 15357650 -88137324 + L1Md_F2 LINE L1 4964 5586 -297 5 702 7734 65 2 4 chr15 15357651 15358647 -88136327 + L1Md_F2 LINE L1 5588 6581 -1 5 702 393 22 0 0 chr15 15359227 15359273 -88135701 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 5 702 973 131 6 11 chr15 15359275 15359452 -88135522 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 5 702 243 0 0 0 chr15 15359452 15359479 -88135495 + (CAGG)n Simple_repeat Simple_repeat 1 27 0 5 702 210 254 16 0 chr15 15361645 15361708 -88133266 + (TATG)n Simple_repeat Simple_repeat 4 67 0 5 702 360 0 0 0 chr15 15362031 15362071 -88132903 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 702 1994 169 3 6 chr15 15362207 15362547 -88132427 + Lx5 LINE L1 6228 6566 -484 5 702 280 254 42 0 chr15 15362664 15362735 -88132239 + B3 SINE B2 8 81 -135 5 702 1116 133 0 0 chr15 15362765 15362945 -88132029 + (TC)n Simple_repeat Simple_repeat 1 180 0 5 702 230 286 0 0 chr15 15362951 15363000 -88131974 + C-rich Low_complexity Low_complexity 6 54 0 5 702 822 138 19 6 chr15 15363002 15363162 -88131812 + CT-rich Low_complexity Low_complexity 3 164 0 5 702 234 345 35 26 chr15 15363428 15363544 -88131430 + Lx6 LINE L1 6983 7099 -361 5 702 768 314 49 13 chr15 15363561 15363948 -88131026 + Lx7 LINE L1 5163 5563 -317 5 702 2964 155 95 6 chr15 15363951 15364490 -88130484 + Lx2B LINE L1 6413 6999 -1 5 702 536 275 0 0 chr15 15364557 15364677 -88130297 - ORR1D1 LTR MaLR -236 138 19 5 702 1082 274 48 51 chr15 15364774 15365105 -88129869 + ORR1D1 LTR MaLR 1 330 -44 5 702 515 291 20 31 chr15 15365105 15365300 -88129674 + Lx7 LINE L1 6169 6361 -1335 5 702 25 51 0 0 chr15 15366134 15366173 -88128801 + AT_rich Low_complexity Low_complexity 1 39 0 5 702 21 0 0 0 chr15 15366296 15366317 -88128657 + AT_rich Low_complexity Low_complexity 1 21 0 5 702 27 29 0 0 chr15 15366514 15366548 -88128426 + AT_rich Low_complexity Low_complexity 1 34 0 5 702 34781 75 4 2 chr15 15366588 15373123 -88121851 - L1Md_F2 LINE L1 -2 6580 98 5 702 984 216 11 26 chr15 15373111 15373377 -88121597 - L1VL1 LINE L1 -6127 295 34 5 702 366 301 39 50 chr15 15373433 15373615 -88121359 - Lx7 LINE L1 -1351 6345 6166 5 702 294 29 0 0 chr15 15373625 15373660 -88121314 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 702 1950 307 49 26 chr15 15374342 15375646 -88119328 + Lx7 LINE L1 4941 6277 -1419 5 702 2302 30 7 0 chr15 15375636 15375932 -88119042 - L1_Mm LINE L1 -3713 2170 1873 5 702 1946 51 39 0 chr15 15375932 15376187 -88118787 + L1Md_F3 LINE L1 6306 6570 -14 5 702 279 304 65 73 chr15 15376248 15376372 -88118602 + Lx7 LINE L1 6368 6490 -1206 5 702 487 310 12 6 chr15 15376559 15376731 -88118243 + Lx7 LINE L1 7130 7302 -394 5 702 29 28 0 0 chr15 15376886 15376922 -88118052 + AT_rich Low_complexity Low_complexity 1 36 0 5 702 321 26 0 0 chr15 15377062 15377100 -88117874 + (TC)n Simple_repeat Simple_repeat 1 38 0 5 702 318 278 52 0 chr15 15377186 15377283 -88117691 - Lx7 LINE L1 -319 5561 5460 5 702 1459 266 87 19 chr15 15377275 15377747 -88117227 + Lx7 LINE L1 6005 6508 -1188 5 702 2155 246 125 58 chr15 15377755 15378619 -88116355 + Lx7 LINE L1 6775 7696 0 5 702 6122 111 28 3 chr15 15378684 15379894 -88115080 - L1Md_F2 LINE L1 -2 6580 5329 5 702 3991 107 27 6 chr15 15379891 15380520 -88114454 - L1Md_F2 LINE L1 -3479 2404 1763 5 702 370 274 43 79 chr15 15381974 15382228 -88112746 - L1MCa LINE L1 -3442 2879 2635 5 702 37 39 0 0 chr15 15382587 15382638 -88112336 + AT_rich Low_complexity Low_complexity 1 51 0 5 702 242 292 13 81 chr15 15382663 15382748 -88112226 - L1MCa LINE L1 -4419 2089 2006 5 702 1108 121 15 35 chr15 15382748 15382946 -88112028 + B2_Mm2 SINE B2 2 195 0 5 702 242 292 13 81 chr15 15382946 15383009 -88111965 - L1MCa LINE L1 -4503 2005 1951 5 702 518 79 0 13 chr15 15383021 15383098 -88111876 + (TA)n Simple_repeat Simple_repeat 1 76 0 5 702 208 195 22 22 chr15 15383262 15383299 -88111675 + T-rich Low_complexity Low_complexity 55 90 0 5 702 312 27 0 0 chr15 15383299 15383336 -88111638 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 702 208 195 22 22 chr15 15383336 15383387 -88111587 + T-rich Low_complexity Low_complexity 2 54 0 5 702 25 51 0 0 chr15 15383550 15383589 -88111385 + AT_rich Low_complexity Low_complexity 1 39 0 5 702 2161 115 9 58 chr15 15383592 15383935 -88111039 + ORR1A3 LTR MaLR 1 326 0 5 702 3929 263 63 18 chr15 15383995 15384103 -88110871 + Lx7 LINE L1 6075 6172 -1524 5 702 465 19 0 0 chr15 15384103 15384157 -88110817 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 702 3929 263 63 18 chr15 15384157 15385170 -88109804 + Lx7 LINE L1 6173 7246 -450 5 702 1778 261 24 38 chr15 15385735 15386236 -88108738 - Lx6 LINE L1 -4 7456 6963 5 702 301 360 17 9 chr15 15387158 15387273 -88107701 - RSINE1 SINE B4 -46 119 4 5 702 304 248 47 58 chr15 15387273 15387425 -88107549 + L1MA6 LINE L1 5838 5990 -310 5 702 618 198 52 0 chr15 15387665 15387781 -88107193 + ETnERV2-int LTR ERVK 7070 7191 -215 5 702 27 29 0 0 chr15 15388974 15389008 -88105966 + AT_rich Low_complexity Low_complexity 1 34 0 5 702 987 125 11 43 chr15 15389050 15389234 -88105740 + B2_Mm2 SINE B2 1 178 -17 5 702 5472 114 6 15 chr15 15389279 15390132 -88104842 + Lx3A LINE L1 6119 6963 -18 5 702 4175 29 0 0 chr15 15390724 15391211 -88103763 + L1Md_T LINE L1 6096 6582 0 5 702 21 0 0 0 chr15 15392035 15392056 -88102918 + AT_rich Low_complexity Low_complexity 1 21 0 5 702 24 0 0 0 chr15 15392220 15392244 -88102730 + AT_rich Low_complexity Low_complexity 1 24 0 5 702 23 0 0 0 chr15 15392690 15392713 -88102261 + AT_rich Low_complexity Low_complexity 1 23 0 5 702 1585 312 46 12 chr15 15392731 15393301 -88101673 - Lx5 LINE L1 -17 7033 6455 5 702 594 327 12 7 chr15 15393299 15393560 -88101414 + Lx5 LINE L1 6250 6730 -730 5 702 313 211 0 40 chr15 15393765 15393839 -88101135 + ORR1B1-int LTR MaLR 1300 1370 0 5 702 1111 205 4 35 chr15 15393839 15394067 -88100907 + ORR1B1 LTR MaLR 1 221 -173 5 702 569 50 25 0 chr15 15394091 15394171 -88100803 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 5 702 734 288 52 36 chr15 15394171 15394611 -88100363 - L1_Mur3 LINE L1 -2750 3130 2684 5 702 358 19 0 53 chr15 15394647 15394704 -88100270 + (TTTA)n Simple_repeat Simple_repeat 1 54 0 5 702 2016 175 38 0 chr15 15394704 15395069 -88099905 - Lx2 LINE L1 -27 6970 6592 5 702 608 215 50 0 chr15 15395072 15395193 -88099781 + RMER10A LTR ERVL 39 165 -277 5 702 398 310 54 7 chr15 15395212 15395491 -88099483 - L1_Mur3 LINE L1 -4345 1535 1244 5 702 333 0 0 0 chr15 15395514 15395551 -88099423 + (TTA)n Simple_repeat Simple_repeat 3 39 0 5 702 23 33 0 0 chr15 15396410 15396440 -88098534 + AT_rich Low_complexity Low_complexity 1 30 0 5 702 489 17 0 0 chr15 15396844 15396902 -88098072 + (TC)n Simple_repeat Simple_repeat 2 59 0 5 702 1387 262 96 72 chr15 15397024 15397650 -88097324 + Lx9 LINE L1 6996 7636 -8 5 702 351 0 0 0 chr15 15398311 15398350 -88096624 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 5 702 429 20 0 0 chr15 15398483 15398533 -88096441 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 702 255 329 19 37 chr15 15398844 15399005 -88095969 + CT-rich Low_complexity Low_complexity 3 160 0 5 702 21 0 0 0 chr15 15399053 15399074 -88095900 + AT_rich Low_complexity Low_complexity 1 21 0 5 702 555 56 0 0 chr15 15399493 15399564 -88095410 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 5 702 272 163 87 0 chr15 15401126 15401218 -88093756 + (TA)n Simple_repeat Simple_repeat 2 101 0 5 702 1320 271 25 83 chr15 15401247 15401763 -88093211 - RMER1C Other Other -1 1341 856 5 702 471 300 79 75 chr15 15401791 15402032 -88092942 + RLTR12B LTR ERVK 48 289 -239 5 702 703 113 0 0 chr15 15402041 15402138 -88092836 + RLTR9A2 LTR ERVK 1 97 -286 5 702 13540 163 34 47 chr15 15402166 15404805 -88090169 + ETnERV2-int LTR ERVK 1325 3929 -3477 5 702 315 0 0 0 chr15 15404805 15404840 -88090134 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 702 13540 167 68 35 chr15 15404840 15406065 -88088909 + ETnERV2-int LTR ERVK 2871 4176 -1230 5 702 470 219 8 50 chr15 15406073 15406193 -88088781 + ETnERV2-int LTR ERVK 6097 6211 -1195 5 702 389 278 16 57 chr15 15406319 15406379 -88088595 + ETnERV2-int LTR ERVK 6306 6363 -1043 5 702 7080 15 17 0 chr15 15406379 15407187 -88087787 - RLTR13B2 LTR ERVK 0 822 1 5 702 389 278 16 57 chr15 15407187 15407248 -88087726 + ETnERV2-int LTR ERVK 6364 6422 -984 5 702 336 280 86 78 chr15 15407525 15407536 -88087438 + RLTR12B LTR ERVK 241 248 -280 5 702 2135 124 78 6 chr15 15407536 15407893 -88087081 + RLTR9A2 LTR ERVK 1 383 0 5 702 336 280 86 78 chr15 15407893 15408137 -88086837 + RLTR12B LTR ERVK 249 498 -30 5 702 780 293 59 20 chr15 15408213 15408519 -88086455 - RMER1C Other Other -485 857 540 5 702 205 187 27 0 chr15 15408592 15408667 -88086307 + T-rich Low_complexity Low_complexity 2 78 0 5 702 3572 62 24 18 chr15 15408704 15408750 -88086224 + LTRIS2 LTR ERV1 69 114 -450 5 702 195 42 0 0 chr15 15408750 15408774 -88086200 + (C)n Simple_repeat Simple_repeat 1 24 0 5 702 3572 62 24 18 chr15 15408774 15409220 -88085754 + LTRIS2 LTR ERV1 115 563 -1 5 702 441 248 95 41 chr15 15409224 15409371 -88085603 - B3 SINE B2 -59 157 3 5 702 773 162 114 3 chr15 15409592 15409760 -88085214 + RLTR25A LTR ERVK 216 398 -705 5 702 1249 264 75 6 chr15 15409839 15410186 -88084788 - Lx6 LINE L1 -398 7062 6692 5 702 560 264 52 52 chr15 15411019 15411343 -88083631 + Lx7 LINE L1 7371 7694 -2 5 702 26 0 0 0 chr15 15411393 15411419 -88083555 + AT_rich Low_complexity Low_complexity 1 26 0 5 702 457 240 57 8 chr15 15411760 15411882 -88083092 + Lx3C LINE L1 6847 6974 -2 5 702 34 0 0 0 chr15 15411883 15411917 -88083057 + AT_rich Low_complexity Low_complexity 1 34 0 5 702 716 204 222 0 chr15 15412390 15412611 -88082363 - Lx9 LINE L1 -16 7628 7359 5 702 1762 189 13 67 chr15 15412611 15412985 -88081989 - ORR1B1 LTR MaLR 0 394 41 5 702 29 0 0 0 chr15 15413958 15413987 -88080987 + AT_rich Low_complexity Low_complexity 1 29 0 5 702 351 44 0 0 chr15 15414145 15414190 -88080784 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 702 30 45 0 0 chr15 15414613 15414657 -88080317 + AT_rich Low_complexity Low_complexity 1 44 0 6 702 23 54 0 0 chr15 15415044 15415081 -88079893 + AT_rich Low_complexity Low_complexity 1 37 0 6 702 2624 115 4 106 chr15 15415279 15415796 -88079178 + Lx2A LINE L1 6545 7008 0 6 702 24 0 0 0 chr15 15416025 15416049 -88078925 + AT_rich Low_complexity Low_complexity 1 24 0 6 702 735 224 163 5 chr15 15416187 15416389 -88078585 - ORR1D1 LTR MaLR -140 234 1 6 702 1522 333 12 51 chr15 15416406 15416580 -88078394 - Lx5 LINE L1 -4 7046 6875 6 702 3172 51 5 0 chr15 15416580 15416974 -88078000 - MTA_Mm LTR MaLR 0 396 1 6 702 1522 333 12 51 chr15 15416974 15417391 -88077583 - Lx5 LINE L1 -176 6874 6478 6 702 387 0 0 0 chr15 15417631 15417674 -88077300 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 6 702 624 335 50 88 chr15 15418054 15418467 -88076507 + MER34 LTR ERV1 2 402 -140 6 702 1128 176 53 0 chr15 15418467 15418711 -88076263 - Lx2A LINE L1 -11 6997 6741 6 702 624 335 50 88 chr15 15418711 15418857 -88076117 + MER34 LTR ERV1 403 540 -2 6 702 532 171 9 9 chr15 15419142 15419254 -88075720 - Lx2 LINE L1 -3 6994 6883 6 702 288 159 0 0 chr15 15419994 15420038 -88074936 - Lx7 LINE L1 -2059 5637 5594 6 702 3100 46 3 3 chr15 15420045 15420436 -88074538 + MTA_Mm LTR MaLR 6 396 0 6 702 8461 60 7 2 chr15 15420436 15421528 -88073446 + MTA_Mm-int LTR MaLR 1 1098 0 6 702 3194 51 2 2 chr15 15421528 15421924 -88073050 + MTA_Mm LTR MaLR 1 396 0 6 702 1457 192 58 6 chr15 15421924 15422270 -88072704 - Lx7 LINE L1 -287 5593 5230 6 702 318 232 14 14 chr15 15422769 15422839 -88072135 + MTC LTR MaLR 5 74 -347 6 702 21 100 0 0 chr15 15423069 15423139 -88071835 + AT_rich Low_complexity Low_complexity 1 70 0 6 702 225 0 0 0 chr15 15423439 15423464 -88071510 + (TCTG)n Simple_repeat Simple_repeat 1 25 0 6 702 285 128 0 0 chr15 15423464 15423511 -88071463 + (TCCC)n Simple_repeat Simple_repeat 2 48 0 6 702 306 50 0 0 chr15 15423904 15423944 -88071030 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 702 1286 214 63 47 chr15 15424221 15424629 -88070345 - RLTR1 LTR ERV1 0 624 135 6 702 1758 224 64 90 chr15 15424714 15425258 -88069716 - RMER15 LTR ERVL -43 532 3 6 702 1283 215 152 6 chr15 15425979 15426321 -88068653 + ORR1B1 LTR MaLR 1 392 -2 6 702 223 232 14 28 chr15 15426546 15426617 -88068357 + (TCTCTG)n Simple_repeat Simple_repeat 2 71 0 6 702 648 138 7 146 chr15 15426869 15426950 -88068024 + ORR1A3 LTR MaLR 203 275 -51 6 702 1045 121 19 99 chr15 15426950 15427161 -88067813 + B2_Mm2 SINE B2 2 195 0 6 702 648 138 7 146 chr15 15427161 15427223 -88067751 + ORR1A3 LTR MaLR 276 326 0 6 702 225 336 118 0 chr15 15428912 15429031 -88065943 - L4 LINE RTE -486 1543 1411 6 702 405 0 0 0 chr15 15430667 15430712 -88064262 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 702 216 175 0 0 chr15 15430805 15430845 -88064129 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 702 25 65 0 0 chr15 15430905 15430951 -88064023 + AT_rich Low_complexity Low_complexity 1 46 0 6 702 443 333 65 0 chr15 15431288 15431474 -88063500 + MTEb LTR MaLR 6 203 -176 6 702 927 349 46 0 chr15 15431715 15432039 -88062935 + MTE2a LTR MaLR 18 356 -23 6 702 369 0 0 0 chr15 15432135 15432176 -88062798 + (TC)n Simple_repeat Simple_repeat 2 42 0 6 702 603 27 0 0 chr15 15432176 15432248 -88062726 + (TG)n Simple_repeat Simple_repeat 2 74 0 6 702 206 160 20 0 chr15 15432763 15432813 -88062161 + (TA)n Simple_repeat Simple_repeat 1 51 0 6 702 2636 47 6 196 chr15 15432813 15433293 -88061681 + RLTR10 LTR ERVK 1 389 -1 6 702 387 0 0 0 chr15 15433293 15433336 -88061638 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 702 8664 145 17 7 chr15 15433392 15434973 -88060001 + Lx2A LINE L1 5408 7006 -2 6 702 198 0 0 0 chr15 15435226 15435248 -88059726 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 6 702 849 147 0 13 chr15 15435269 15435428 -88059546 - Lx2B LINE L1 0 7000 6844 6 702 1709 178 0 0 chr15 15435435 15435710 -88059264 + Lx2 LINE L1 6582 6856 -141 6 702 427 328 21 67 chr15 15435775 15436161 -88058813 + Lx9 LINE L1 7245 7612 -32 6 702 1108 113 21 5 chr15 15436180 15436374 -88058600 + L1_Mus3 LINE L1 6413 6616 -20 6 702 38 61 0 0 chr15 15437397 15437463 -88057511 + AT_rich Low_complexity Low_complexity 1 66 0 6 702 42 57 0 0 chr15 15438919 15438989 -88055985 + AT_rich Low_complexity Low_complexity 1 70 0 6 702 225 0 0 0 chr15 15441740 15441765 -88053209 + (T)n Simple_repeat Simple_repeat 1 25 0 6 702 386 208 172 4 chr15 15441992 15442119 -88052855 - Lx9 LINE L1 -2 7642 7494 6 702 459 125 0 0 chr15 15442119 15442191 -88052783 + (CA)n Simple_repeat Simple_repeat 1 72 0 6 702 386 208 172 4 chr15 15442191 15442290 -88052684 - Lx9 LINE L1 -151 7493 7378 6 702 324 0 0 0 chr15 15442318 15442354 -88052620 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 702 633 346 18 18 chr15 15443122 15443343 -88051631 + B4A SINE B4 10 230 -62 6 702 414 0 0 0 chr15 15443394 15443440 -88051534 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 702 8222 165 35 23 chr15 15443442 15443700 -88051274 - RLTR21 LTR ERVK 0 1572 1293 6 702 423 0 0 0 chr15 15443700 15443747 -88051227 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 702 8222 165 35 23 chr15 15443747 15445041 -88049933 - RLTR21 LTR ERVK -280 1292 2 6 702 273 135 0 0 chr15 15445041 15445093 -88049881 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 702 241 308 15 15 chr15 15445095 15445161 -88049813 + B4A SINE B4 227 292 0 6 702 1592 212 82 174 chr15 15445326 15445999 -88048975 + RMER19C LTR ERVK 1 611 0 6 702 1379 161 4 4 chr15 15448568 15448817 -88046157 + Lx LINE L1 6406 6654 0 6 702 766 179 14 0 chr15 15449445 15449590 -88045384 - B1_Mur3 SINE Alu 0 149 3 6 702 237 169 33 17 chr15 15449598 15449658 -88045316 + T-rich Low_complexity Low_complexity 3 63 0 6 702 602 201 14 7 chr15 15451077 15451217 -88043757 + Lx4A LINE L1 6918 7058 0 6 702 794 264 19 9 chr15 15453760 15453974 -88041000 - B3 SINE B2 0 216 1 6 702 1025 161 83 28 chr15 15454333 15454550 -88040424 + Lx2B LINE L1 6771 6999 -1 6 702 2688 151 29 4 chr15 15454708 15455161 -88039813 - L1_Mm LINE L1 -60 5823 5360 6 702 180 0 0 0 chr15 15455163 15455183 -88039791 + (T)n Simple_repeat Simple_repeat 1 20 0 6 702 31221 24 0 0 chr15 15455192 15459538 -88035436 - L1Md_T LINE L1 -1 6581 2234 6 702 7295 51 17 2 chr15 15459516 15460460 -88034514 - L1Md_T LINE L1 -5554 1170 213 6 702 331 106 0 0 chr15 15460458 15460505 -88034469 - L1_Mur2 LINE L1 -516 5361 5315 6 702 6245 137 73 18 chr15 15460506 15461611 -88033363 + Lx2A1 LINE L1 5834 6999 -9 6 702 189 74 0 0 chr15 15461611 15461638 -88033336 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 6 702 28 71 0 0 chr15 15461661 15461717 -88033257 + AT_rich Low_complexity Low_complexity 1 56 0 6 702 365 262 33 46 chr15 15462078 15462230 -88032744 + Lx2B LINE L1 6845 6994 -6 6 702 3877 87 9 2 chr15 15463300 15463833 -88031141 - L1Md_F2 LINE L1 -19 6563 6027 6 702 3390 83 6 12 chr15 15463833 15463945 -88031029 + L1_Mm LINE L1 2044 2151 -3732 6 702 207 0 0 0 chr15 15463945 15463968 -88031006 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 6 702 3390 83 6 12 chr15 15463968 15464344 -88030630 + L1_Mm LINE L1 2152 2529 -3354 6 702 659 304 87 28 chr15 15464342 15464664 -88030310 + Lx8 LINE L1 6350 6690 -783 6 702 821 238 243 59 chr15 15464723 15465197 -88029777 + RMER2 LTR ERV1 3 563 -4 6 702 881 314 10 3 chr15 15465327 15465630 -88029344 + Lx7 LINE L1 6976 7280 -416 6 702 398 91 42 77 chr15 15465647 15465790 -88029184 + T-rich Low_complexity Low_complexity 3 140 0 6 702 203 235 43 14 chr15 15465929 15465998 -88028976 + A-rich Low_complexity Low_complexity 3 73 0 6 703 21 0 0 0 chr15 15466961 15466982 -88027992 + AT_rich Low_complexity Low_complexity 1 21 0 6 703 246 62 0 0 chr15 15468516 15468548 -88026426 + (A)n Simple_repeat Simple_repeat 1 32 0 6 703 402 57 0 0 chr15 15469019 15469072 -88025902 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 703 406 233 11 0 chr15 15469528 15469618 -88025356 + Lx9 LINE L1 7315 7405 -239 6 703 263 246 35 0 chr15 15469622 15469679 -88025295 - B3 SINE B2 -63 153 95 6 703 766 285 12 94 chr15 15470293 15470622 -88024352 - Lx6 LINE L1 -3 7457 7156 6 703 825 166 144 0 chr15 15470598 15470785 -88024189 - Lx2 LINE L1 -795 6202 5989 6 703 2435 143 3 3 chr15 15470780 15471165 -88023809 + Lx2 LINE L1 6219 6603 -394 6 703 728 68 0 10 chr15 15471256 15471360 -88023614 + (GGAA)n Simple_repeat Simple_repeat 2 104 0 6 703 1128 89 6 16 chr15 15471377 15471559 -88023415 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 6 703 333 135 0 0 chr15 15472191 15472243 -88022731 + ETnERV2-int LTR ERVK 7331 7382 -24 6 703 24 0 0 0 chr15 15472243 15472267 -88022707 + AT_rich Low_complexity Low_complexity 1 24 0 6 703 1823 154 37 34 chr15 15472276 15472599 -88022375 + RLTR9B2 LTR ERVK 1 324 -96 6 703 25 31 0 0 chr15 15472779 15472811 -88022163 + AT_rich Low_complexity Low_complexity 1 32 0 6 703 200 212 15 0 chr15 15473610 15473676 -88021298 + CT-rich Low_complexity Low_complexity 3 69 0 6 703 2592 258 75 15 chr15 15474254 15475131 -88019843 + L1_Rod LINE L1 477 1412 -4435 6 703 715 194 23 57 chr15 15475161 15475336 -88019638 + URR1A DNA MER1_type 56 224 -2 6 703 2917 229 87 17 chr15 15475338 15476478 -88018496 + L1_Rod LINE L1 1403 2742 -3105 6 703 1774 258 53 46 chr15 15476464 15477206 -88017768 + L1_Rod LINE L1 3577 4323 -1524 6 703 964 278 20 25 chr15 15477236 15477634 -88017340 + L1_Rod LINE L1 4568 4963 -884 6 703 25470 24 0 6 chr15 15477658 15480710 -88014264 + L1Md_T LINE L1 2553 5586 -297 6 703 8238 42 0 0 chr15 15480710 15481705 -88013269 + L1Md_T LINE L1 5587 6581 -1 6 703 1463 75 10 0 chr15 15481701 15481901 -88013073 + L1Md_T LINE L1 6381 6582 0 6 703 399 206 30 20 chr15 15481901 15482000 -88012974 + L1_Rod LINE L1 4977 5076 -771 6 703 2454 240 68 37 chr15 15482056 15482840 -88012134 + Lx9 LINE L1 6837 7644 0 6 703 342 100 0 0 chr15 15482872 15482932 -88012042 + (GA)n Simple_repeat Simple_repeat 1 60 0 6 703 490 367 0 0 chr15 15483227 15483437 -88011537 + B3 SINE B2 2 211 -5 6 703 734 257 40 30 chr15 15484234 15484649 -88010325 + L1_Mur3 LINE L1 5201 5552 -295 6 703 2834 42 0 5 chr15 15484967 15485359 -88009615 - L1Md_T LINE L1 -66 6516 6135 6 703 876 34 0 0 chr15 15485359 15485477 -88009497 + L1Md_A LINE L1 6464 6581 -1 6 703 1094 262 75 43 chr15 15485491 15485647 -88009327 - Lx9 LINE L1 -1719 5925 5715 6 703 504 0 0 0 chr15 15485647 15485703 -88009271 + (TA)n Simple_repeat Simple_repeat 1 56 0 6 703 1094 251 74 50 chr15 15485703 15485890 -88009084 - Lx9 LINE L1 -133 5714 5536 6 703 795 191 5 52 chr15 15485890 15486083 -88008891 + Lx2A1 LINE L1 6819 7002 -6 7 703 1094 251 74 50 chr15 15486083 15486182 -88008792 - Lx9 LINE L1 -312 5535 5435 6 703 257 324 85 33 chr15 15486205 15486372 -88008602 + Lx9 LINE L1 7234 7408 -236 7 703 296 65 0 42 chr15 15486372 15486420 -88008554 + (TATATG)n Simple_repeat Simple_repeat 6 51 0 7 703 257 324 85 33 chr15 15486420 15486641 -88008333 + Lx9 LINE L1 7409 7642 -2 7 703 720 64 0 0 chr15 15487454 15487548 -88007426 + (TG)n Simple_repeat Simple_repeat 2 95 0 7 703 256 235 45 89 chr15 15487597 15487709 -88007265 - Lx7 LINE L1 -501 7195 7089 7 703 466 355 50 29 chr15 15488512 15488750 -88006224 + B4 SINE B4 37 279 -13 7 703 225 0 0 0 chr15 15488792 15488817 -88006157 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 703 458 61 0 15 chr15 15488817 15488884 -88006090 + (GA)n Simple_repeat Simple_repeat 1 66 0 7 703 469 335 45 6 chr15 15489624 15489780 -88005194 - B3 SINE B2 -8 208 47 7 703 25 31 0 0 chr15 15490001 15490033 -88004941 + AT_rich Low_complexity Low_complexity 1 32 0 7 703 219 69 0 0 chr15 15490224 15490253 -88004721 + (A)n Simple_repeat Simple_repeat 1 29 0 7 703 443 287 0 62 chr15 15490253 15490383 -88004591 + RMER5 LTR ERV1 21 142 -392 7 703 535 220 8 41 chr15 15491005 15491128 -88003846 + B1_Mur4 SINE Alu 31 149 -1 7 703 1166 273 95 30 chr15 15491225 15491700 -88003274 + MER67C LTR ERV1 204 709 -2 7 703 227 280 220 13 chr15 15492261 15492420 -88002554 + B3A SINE B2 1 192 -6 7 703 270 0 0 0 chr15 15493140 15493170 -88001804 + (T)n Simple_repeat Simple_repeat 1 30 0 7 703 180 338 26 13 chr15 15493262 15493340 -88001634 + L2 LINE L2 2710 2788 -631 7 703 1145 75 0 0 chr15 15493457 15493603 -88001371 - B1_Mus2 SINE Alu -1 146 1 7 703 21 0 0 0 chr15 15495538 15495559 -87999415 + AT_rich Low_complexity Low_complexity 1 21 0 7 703 1577 186 12 68 chr15 15495568 15495908 -87999066 - ORR1A4 LTR MaLR -8 321 1 7 703 22 35 0 0 chr15 15496029 15496058 -87998916 + AT_rich Low_complexity Low_complexity 1 29 0 7 703 3340 153 51 26 chr15 15496160 15496782 -87998192 - Lx3C LINE L1 -2 6974 6337 7 703 23 68 0 0 chr15 15497124 15497168 -87997806 + AT_rich Low_complexity Low_complexity 1 44 0 7 703 1265 266 50 11 chr15 15497802 15498159 -87996815 + ORR1D1 LTR MaLR 4 374 0 7 703 549 275 36 3 chr15 15498162 15498317 -87996657 + ORR1D1-int LTR MaLR 13 169 -1340 7 703 1055 84 11 11 chr15 15499578 15499758 -87995216 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 7 703 873 273 26 22 chr15 15499768 15500000 -87994974 + MTD LTR MaLR 21 253 -166 7 703 461 252 143 0 chr15 15500000 15500147 -87994827 + MTC LTR MaLR 254 421 0 1 703 425 244 28 99 chr15 15500367 15500385 -87994589 + RMER1C Other Other 1173 1190 -152 2 703 1031 129 6 0 chr15 15500385 15500563 -87994411 + (TTC)n Simple_repeat Simple_repeat 2 180 0 3 703 425 244 28 99 chr15 15500563 15500726 -87994248 + RMER1C Other Other 1191 1341 -1 2 703 29 28 0 0 chr15 15501209 15501245 -87993729 + AT_rich Low_complexity Low_complexity 1 36 0 4 703 295 340 50 34 chr15 15502347 15502609 -87992365 - L1MA6 LINE L1 -20 6280 6015 5 703 362 353 125 29 chr15 15502763 15503043 -87991931 - MLT1A0 LTR MaLR -58 307 1 6 703 3438 126 2 9 chr15 15504204 15504731 -87990243 + Lx3A LINE L1 6459 6981 0 7 703 25 31 0 0 chr15 15504953 15504985 -87989989 + AT_rich Low_complexity Low_complexity 1 32 0 8 703 214 253 21 21 chr15 15505530 15505627 -87989347 + (TA)n Simple_repeat Simple_repeat 1 97 0 9 703 1635 273 79 55 chr15 15507541 15508238 -87986736 - Lx9 LINE L1 -1595 6049 5308 1 703 3220 124 42 15 chr15 15508238 15508762 -87986212 - Lx3B LINE L1 -5 6968 6431 1 703 1635 267 78 55 chr15 15508762 15508933 -87986041 - Lx9 LINE L1 -540 5307 5134 1 703 2881 161 30 7 chr15 15509911 15510473 -87984501 - L1_Mur1 LINE L1 -1105 4781 4207 1 703 709 86 9 0 chr15 15510497 15510602 -87984372 - B1_Mus2 SINE Alu 0 147 42 1 703 225 0 0 159 chr15 15510605 15510718 -87984256 + (CTCTG)n Simple_repeat Simple_repeat 1 95 0 1 703 323 227 0 0 chr15 15510718 15510730 -87984244 - ID_B1 SINE B4 -77 147 82 1 703 396 93 0 0 chr15 15510730 15510784 -87984190 - B1_Mus2 SINE Alu -93 54 1 1 703 1566 164 31 3 chr15 15510788 15511107 -87983867 - L1_Mur1 LINE L1 -1682 4204 3877 1 703 762 216 33 90 chr15 15511143 15511443 -87983531 - Lx7 LINE L1 -45 7651 7369 1 703 433 186 8 17 chr15 15511483 15511603 -87983371 + GA-rich Low_complexity Low_complexity 2 120 0 1 703 33 66 0 0 chr15 15511957 15512018 -87982956 + AT_rich Low_complexity Low_complexity 1 61 0 1 703 4229 268 55 12 chr15 15512033 15513300 -87981674 - Lx7 LINE L1 -359 7337 6016 1 703 3326 33 5 0 chr15 15513512 15513906 -87981068 - MTA_Mm LTR MaLR 0 396 1 2 703 485 303 62 6 chr15 15513989 15514168 -87980806 + MT2A LTR ERVL 1 189 -344 2 703 1192 216 38 112 chr15 15514251 15514649 -87980325 - RLTR11A LTR ERVK -160 368 1 2 703 225 160 40 0 chr15 15514754 15514804 -87980170 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 703 4154 35 2 0 chr15 15514877 15515369 -87979605 + L1Md_T LINE L1 6090 6582 0 2 703 22 56 0 0 chr15 15515882 15515918 -87979056 + AT_rich Low_complexity Low_complexity 1 36 0 2 703 267 266 0 0 chr15 15515981 15516045 -87978929 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 2 703 5816 81 1 12 chr15 15517258 15518060 -87976914 - L1Md_F2 LINE L1 -1 6581 5789 2 703 1129 283 69 64 chr15 15518335 15518702 -87976272 + Lx6 LINE L1 6021 6391 -1069 2 703 4660 87 16 65 chr15 15518702 15519491 -87975483 + RMER17A LTR ERVK 1 751 0 2 703 1129 283 69 64 chr15 15519491 15519573 -87975401 + Lx6 LINE L1 6392 6472 -988 2 703 361 308 33 8 chr15 15519600 15519721 -87975253 + Lx6 LINE L1 6913 7036 -424 2 703 4923 215 31 111 chr15 15519712 15521434 -87973540 - Lx6 LINE L1 -1514 5946 4359 3 703 567 188 0 0 chr15 15521743 15521855 -87973119 + (TA)n Simple_repeat Simple_repeat 2 113 0 3 703 3174 178 81 21 chr15 15523007 15523720 -87971254 + RMER6A LTR ERVK 1 756 0 3 703 1654 219 24 5 chr15 15523929 15524300 -87970674 + RLTR14 LTR ERV1 3 380 -2 3 703 882 250 76 11 chr15 15524729 15525004 -87969970 - Lx6 LINE L1 -15 7445 7153 3 703 343 366 0 15 chr15 15524998 15525134 -87969840 - Lx8 LINE L1 -152 7321 7188 3 703 5824 169 19 4 chr15 15526279 15527915 -87967059 - Lx LINE L1 -1 6653 4994 3 703 5317 175 36 15 chr15 15527912 15528980 -87965994 + Lx3A LINE L1 3903 4993 -884 3 703 22 35 0 0 chr15 15529594 15529623 -87965351 + AT_rich Low_complexity Low_complexity 1 29 0 3 703 4243 174 19 11 chr15 15530287 15531294 -87963680 + Lx3A LINE L1 5662 6784 -197 3 703 40 21 0 0 chr15 15531352 15531399 -87963575 + AT_rich Low_complexity Low_complexity 1 47 0 3 703 2790 226 32 68 chr15 15531399 15531793 -87963181 - L1_Mur3 LINE L1 -228 5652 5274 4 703 252 0 0 0 chr15 15531793 15531821 -87963153 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 4 703 2790 226 32 68 chr15 15531821 15532065 -87962909 - L1_Mur3 LINE L1 -607 5273 5026 4 703 2571 139 10 0 chr15 15532065 15532461 -87962513 - MTB LTR MaLR 0 400 1 4 703 2790 226 32 68 chr15 15532461 15532716 -87962258 - L1_Mur3 LINE L1 -855 5025 4791 4 703 3086 220 163 61 chr15 15532720 15533383 -87961591 - L1_Mur3 LINE L1 -3071 2809 2009 4 703 4092 121 16 62 chr15 15533383 15534170 -87960804 - RMER17A LTR ERVK 0 751 1 4 703 3086 241 105 51 chr15 15534170 15535373 -87959601 - L1_Mur3 LINE L1 -3872 2008 860 4 703 687 328 91 40 chr15 15535367 15536028 -87958946 - L1_Mur3 LINE L1 -7042 686 17 4 703 208 0 62 0 chr15 15536660 15536692 -87958282 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 703 2589 99 0 24 chr15 15537220 15537601 -87957373 + MTB_Mm LTR MaLR 1 372 -35 4 703 384 59 0 0 chr15 15537601 15537652 -87957322 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 703 285 266 20 41 chr15 15537652 15537750 -87957224 - L1_Mur3 LINE L1 -2825 3055 2960 4 703 1045 283 188 0 chr15 15537779 15538251 -87956723 - Lx5 LINE L1 -22 7028 6468 4 703 5287 142 51 18 chr15 15538300 15538892 -87956082 - Lx5 LINE L1 -1083 5967 5363 4 703 1983 118 27 0 chr15 15538892 15539189 -87955785 - Lx3A LINE L1 -10 6971 6667 5 703 5287 174 63 38 chr15 15539189 15539726 -87955248 - Lx5 LINE L1 -515 5362 4811 4 703 705 12 0 0 chr15 15539726 15539808 -87955166 + (TG)n Simple_repeat Simple_repeat 2 83 0 5 703 5287 174 63 38 chr15 15539808 15539927 -87955047 - Lx5 LINE L1 -1067 4810 4684 4 703 559 330 128 71 chr15 15539960 15540427 -87954547 - RMER13A LTR ERVK -131 729 236 5 703 312 307 52 52 chr15 15540686 15540858 -87954116 - RMER13A LTR ERVK -591 269 98 5 703 2925 61 34 3 chr15 15540965 15541343 -87953631 - L1_Mus1 LINE L1 -1 6566 6177 5 703 1248 172 26 7 chr15 15541375 15541645 -87953329 - Lx5 LINE L1 -1191 4686 4412 4 703 3430 250 62 14 chr15 15541646 15542546 -87952428 - Lx5 LINE L1 -2915 2965 2024 4 703 492 18 0 0 chr15 15542546 15542603 -87952371 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 703 3430 250 62 14 chr15 15542603 15542950 -87952024 - Lx5 LINE L1 -3857 2023 1659 4 703 2542 282 38 13 chr15 15542955 15543923 -87951051 - Lx5 LINE L1 -4490 1390 397 4 703 402 238 69 0 chr15 15544304 15544405 -87950569 + RMER20B LTR ERVK 2 109 -518 5 703 409 284 62 21 chr15 15544721 15544915 -87950059 + L1M2 LINE L1 5526 5727 -564 5 703 2024 249 60 10 chr15 15545268 15545766 -87949208 + Lx4A LINE L1 6535 7057 -1 5 703 23 54 0 0 chr15 15545766 15545803 -87949171 + AT_rich Low_complexity Low_complexity 1 37 0 5 703 352 241 43 26 chr15 15546124 15546239 -87948735 - RLTR23 LTR ERV1 0 430 314 5 703 2430 219 113 128 chr15 15547306 15547427 -87947547 - RLTR25B LTR ERVK 0 1028 896 6 703 216 0 0 0 chr15 15547427 15547451 -87947523 + (TC)n Simple_repeat Simple_repeat 1 24 0 6 703 303 28 0 0 chr15 15547461 15547497 -87947477 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 703 459 0 0 0 chr15 15547498 15547549 -87947425 + (CTCTG)n Simple_repeat Simple_repeat 2 52 0 6 703 2430 219 113 128 chr15 15547549 15548430 -87946544 - RLTR25B LTR ERVK -133 895 28 6 703 543 373 22 18 chr15 15548906 15549135 -87945839 + B4A SINE B4 19 248 -44 6 703 24 32 0 0 chr15 15549646 15549677 -87945297 + AT_rich Low_complexity Low_complexity 1 31 0 6 703 32 43 0 0 chr15 15549770 15549816 -87945158 + AT_rich Low_complexity Low_complexity 1 46 0 6 703 26 50 0 0 chr15 15550576 15550616 -87944358 + AT_rich Low_complexity Low_complexity 1 40 0 6 703 262 327 84 24 chr15 15550622 15550788 -87944186 + B3A SINE B2 5 180 -18 6 703 296 331 37 52 chr15 15551096 15551230 -87943744 - B1F SINE Alu 0 149 18 6 703 38 61 0 0 chr15 15551308 15551374 -87943600 + AT_rich Low_complexity Low_complexity 1 66 0 7 703 1095 52 0 7 chr15 15551621 15551756 -87943218 + B1_Mus1 SINE Alu 1 134 -14 7 703 222 387 0 0 chr15 15551803 15551865 -87943109 + ID4_ SINE ID 20 81 -2 7 703 213 224 0 0 chr15 15551868 15551926 -87943048 + (TA)n Simple_repeat Simple_repeat 2 59 0 7 703 225 0 0 0 chr15 15553202 15553227 -87941747 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 703 254 59 0 0 chr15 15553480 15553514 -87941460 + RMER19C LTR ERVK 1 34 -577 7 703 439 341 47 6 chr15 15554009 15554180 -87940794 - B4A SINE B4 -9 283 106 7 703 31 76 0 0 chr15 15554386 15554452 -87940522 + AT_rich Low_complexity Low_complexity 1 66 0 7 703 387 128 0 37 chr15 15554514 15554595 -87940379 - Lx7 LINE L1 0 7696 7619 7 703 24 53 0 0 chr15 15554926 15554964 -87940010 + AT_rich Low_complexity Low_complexity 1 38 0 7 703 1059 95 0 26 chr15 15555143 15555295 -87939679 - B1_Mus1 SINE Alu 0 148 1 8 703 1107 108 96 0 chr15 15555396 15555563 -87939411 - B2_Mm2 SINE B2 -10 185 3 8 703 357 312 112 40 chr15 15556259 15556483 -87938491 - MLT1B LTR MaLR -17 373 134 8 703 2767 315 20 30 chr15 15557147 15558173 -87936801 + Lx8 LINE L1 6448 7463 -10 8 703 3320 166 25 3 chr15 15560133 15560730 -87934244 + Lx2B LINE L1 6389 6998 -2 8 703 679 82 0 0 chr15 15560785 15560883 -87934091 - MusHAL1 LINE L1 -848 1864 1767 8 703 1324 79 16 0 chr15 15560883 15561072 -87933902 + L1Md_F2 LINE L1 6391 6582 0 8 703 22 70 0 0 chr15 15561114 15561157 -87933817 + AT_rich Low_complexity Low_complexity 1 43 0 8 703 180 152 0 0 chr15 15561245 15561278 -87933696 + A-rich Low_complexity Low_complexity 1 33 0 8 703 239 0 0 31 chr15 15561592 15561624 -87933350 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 8 703 1148 140 11 0 chr15 15561640 15561826 -87933148 - B2_Mm1t SINE B2 -4 189 2 9 703 591 173 0 0 chr15 15561859 15561969 -87933005 + (TATATG)n Simple_repeat Simple_repeat 2 111 0 9 703 2523 118 93 9 chr15 15561970 15562389 -87932585 - Lx2 LINE L1 -5 6992 6539 9 703 504 86 0 0 chr15 15562394 15562464 -87932510 + (TTA)n Simple_repeat Simple_repeat 2 71 0 9 703 240 268 106 38 chr15 15562509 15562641 -87932333 - Lx8 LINE L1 -454 7019 6879 9 703 316 261 42 30 chr15 15562703 15562869 -87932105 - L1MA6 LINE L1 -55 6245 6078 9 703 24 85 0 0 chr15 15564264 15564323 -87930651 + AT_rich Low_complexity Low_complexity 1 59 0 9 703 282 59 0 0 chr15 15565003 15565037 -87929937 + L1_Mus4 LINE L1 5610 5643 -993 9 703 286 382 39 52 chr15 15565880 15566109 -87928865 - B4A SINE B4 -2 290 65 9 703 1461 322 73 17 chr15 15567001 15567589 -87927385 - MER67B LTR ERV1 -2 659 39 9 703 246 62 0 0 chr15 15568001 15568033 -87926941 + (TGG)n Simple_repeat Simple_repeat 3 34 0 1 703 338 121 15 0 chr15 15568031 15568097 -87926877 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 703 481 338 29 29 chr15 15568749 15568953 -87926021 + MLT1F-int LTR MaLR 367 570 -919 1 703 40799 12 1 6 chr15 15570250 15576665 -87918309 - L1Md_A LINE L1 0 6582 205 1 703 208 288 0 0 chr15 15576923 15577003 -87917971 + A-rich Low_complexity Low_complexity 1 80 0 1 703 898 265 139 21 chr15 15577592 15577931 -87917043 - MTD LTR MaLR 0 419 41 1 703 195 42 0 0 chr15 15578833 15578857 -87916117 + (GGGA)n Simple_repeat Simple_repeat 1 24 0 1 703 721 262 9 73 chr15 15579475 15579693 -87915281 - B3 SINE B2 -11 205 2 1 703 883 285 99 38 chr15 15580167 15580459 -87914515 - ORR1C2 LTR MaLR -63 321 12 1 703 205 361 128 27 chr15 15581662 15581881 -87913093 + L2 LINE L2 2578 2818 -601 1 703 332 182 11 0 chr15 15582283 15582371 -87912603 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 1 703 4223 65 11 11 chr15 15582541 15583105 -87911869 + L1Md_F2 LINE L1 6018 6581 -1 1 703 309 343 13 53 chr15 15583174 15583325 -87911649 + MLT1A0 LTR MaLR 196 340 -25 1 703 795 340 118 9 chr15 15584251 15584706 -87910268 + Lx6 LINE L1 6556 7434 -26 1 703 500 245 7 21 chr15 15584793 15584935 -87910039 + RMER1C Other Other 1200 1339 -3 1 703 3211 130 9 4 chr15 15584942 15585468 -87909506 + Lx2A1 LINE L1 6480 7008 0 1 703 719 309 30 27 chr15 15585573 15585872 -87909102 + RMER5 LTR ERV1 224 523 -11 1 703 418 290 86 7 chr15 15586020 15586150 -87908824 - MLT2B4 LTR ERVL -402 154 13 1 703 2127 34 4 4 chr15 15586150 15586413 -87908561 + L1Md_F3 LINE L1 6320 6582 -2 1 703 21 0 0 0 chr15 15586513 15586534 -87908440 + AT_rich Low_complexity Low_complexity 1 21 0 1 703 277 389 53 23 chr15 15586689 15586860 -87908114 - B3A SINE B2 -18 180 5 1 703 216 0 0 0 chr15 15587002 15587026 -87907948 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 703 189 0 0 0 chr15 15587458 15587479 -87907495 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 703 378 0 0 0 chr15 15587479 15587520 -87907454 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 703 1904 240 66 22 chr15 15587520 15588103 -87906871 + Lx5 LINE L1 5872 6530 -470 1 703 908 140 0 28 chr15 15588103 15588279 -87906695 + Lx LINE L1 6478 6648 -6 1 703 2772 206 45 13 chr15 15588281 15588864 -87906110 + Lx5 LINE L1 6337 6964 -94 1 703 381 22 0 0 chr15 15588864 15588910 -87906064 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 703 2623 224 49 29 chr15 15588910 15588978 -87905996 + Lx5 LINE L1 6965 7024 -34 1 703 275 288 62 23 chr15 15588964 15589092 -87905882 + Lx5 LINE L1 6918 7050 0 1 703 593 184 58 58 chr15 15589106 15589302 -87905672 + RMER17C LTR ERVK 80 276 -134 1 703 336 24 0 0 chr15 15589302 15589343 -87905631 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 1 703 593 184 58 58 chr15 15589343 15589371 -87905603 + RMER17C LTR ERVK 277 304 -106 1 703 257 247 12 12 chr15 15590030 15590198 -87904776 + (CA)n Simple_repeat Simple_repeat 1 168 0 1 703 292 216 10 10 chr15 15591459 15591557 -87903417 + (TG)n Simple_repeat Simple_repeat 2 99 0 1 703 184 311 123 26 chr15 15591735 15591890 -87903084 - L2 LINE L2 -687 2732 2563 1 703 531 31 0 0 chr15 15592539 15592604 -87902370 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 703 393 222 68 43 chr15 15593140 15593347 -87901627 + Lx9 LINE L1 7412 7623 -21 1 703 21 57 0 0 chr15 15593834 15593869 -87901105 + AT_rich Low_complexity Low_complexity 1 35 0 1 703 275 183 0 0 chr15 15594102 15594162 -87900812 - Lx9 LINE L1 -3 7641 7582 1 703 3391 72 13 4 chr15 15594850 15595308 -87899666 - L1_Mus2 LINE L1 -2 6564 6103 1 703 838 275 62 68 chr15 15595799 15596437 -87898537 - Lx9 LINE L1 -1107 6537 5799 1 703 1144 251 90 67 chr15 15596437 15596869 -87898105 - RMER19C LTR ERVK 0 611 170 1 703 28 29 0 0 chr15 15597253 15597288 -87897686 + AT_rich Low_complexity Low_complexity 1 35 0 1 704 22 0 0 0 chr15 15597956 15597978 -87896996 + AT_rich Low_complexity Low_complexity 1 22 0 1 704 351 350 0 0 chr15 15598089 15598186 -87896788 + B3 SINE B2 4 100 -116 1 704 465 292 89 39 chr15 15599043 15599246 -87895728 + B3 SINE B2 4 216 0 1 704 5552 70 3 0 chr15 15599274 15599993 -87894981 - L1_Mus1 LINE L1 0 6567 5847 1 704 1947 50 4 0 chr15 15599993 15600234 -87894740 + L1_Mus1 LINE L1 5639 5880 -687 1 704 425 42 41 14 chr15 15601321 15601394 -87893580 + (TTTTG)n Simple_repeat Simple_repeat 1 75 0 1 704 308 314 73 0 chr15 15601554 15601636 -87893338 - Lx9 LINE L1 -1154 6490 6403 1 704 189 0 0 0 chr15 15601636 15601657 -87893317 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 704 308 314 73 0 chr15 15601657 15601698 -87893276 - Lx9 LINE L1 -1242 6402 6359 1 704 471 18 0 0 chr15 15601713 15601769 -87893205 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 704 537 343 61 55 chr15 15601798 15602326 -87892648 + Lx9 LINE L1 6513 7043 -601 1 704 886 280 39 19 chr15 15602682 15603041 -87891933 + L1M5 LINE L1 5395 5762 -416 1 704 2211 69 104 0 chr15 15603453 15603771 -87891203 - L1_Mus1 LINE L1 -2 6565 6215 1 704 1684 119 4 11 chr15 15603771 15604043 -87890931 + L1_Mm LINE L1 1979 2248 -3635 1 704 22 0 0 0 chr15 15604155 15604177 -87890797 + AT_rich Low_complexity Low_complexity 1 22 0 1 704 372 22 0 0 chr15 15604524 15604569 -87890405 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 704 1055 122 0 0 chr15 15605025 15605172 -87889802 + B1_Mus2 SINE Alu 1 147 0 1 704 456 261 45 0 chr15 15605536 15605647 -87889327 - RMER1C Other Other -25 1317 1202 1 704 363 96 0 0 chr15 15605651 15605703 -87889271 + (GGA)n Simple_repeat Simple_repeat 3 54 0 1 704 1124 282 178 35 chr15 15605737 15605997 -87888977 - RMER1C Other Other -131 1211 926 1 704 696 24 0 0 chr15 15605997 15606079 -87888895 + (TC)n Simple_repeat Simple_repeat 1 82 0 1 704 1124 282 178 35 chr15 15606079 15606418 -87888556 - RMER1C Other Other -417 925 528 1 704 500 158 0 0 chr15 15606790 15606866 -87888108 - Lx LINE L1 -369 6285 6210 1 704 232 108 0 0 chr15 15606861 15606898 -87888076 + L1_Mus1 LINE L1 6518 6554 -13 1 704 249 326 0 30 chr15 15606999 15607100 -87887874 + B4 SINE B4 131 228 -64 1 704 1951 192 60 11 chr15 15607104 15607551 -87887423 - Lx4B LINE L1 -727 6331 5863 1 704 1899 249 7 7 chr15 15607551 15607987 -87886987 + Lx2B LINE L1 6342 6777 -223 1 704 233 196 18 0 chr15 15607989 15608045 -87886929 + Lx2B LINE L1 6941 6997 -3 1 704 282 56 0 0 chr15 15608057 15608093 -87886881 + (CCA)n Simple_repeat Simple_repeat 2 37 0 1 704 277 127 0 60 chr15 15610461 15610533 -87884441 - Lx LINE L1 -364 6290 6250 1 704 7103 118 0 28 chr15 15610747 15611101 -87883873 - Lx LINE L1 0 6654 6308 1 704 2665 40 3 27 chr15 15611101 15611436 -87883538 + IAPLTR2b LTR ERVK 1 327 0 1 704 7103 126 0 23 chr15 15611436 15612357 -87882617 - Lx LINE L1 -347 6307 5410 1 704 24 32 0 0 chr15 15612489 15612520 -87882454 + AT_rich Low_complexity Low_complexity 1 31 0 1 704 5210 82 21 1 chr15 15612684 15613393 -87881581 - L1_Mus2 LINE L1 -45 6521 5799 1 704 583 226 45 0 chr15 15613393 15613526 -87881448 - ORR1B2 LTR MaLR -228 139 1 1 704 1676 186 18 41 chr15 15613526 15613919 -87881055 - ORR1B2-int LTR MaLR 0 1509 1126 1 704 1563 210 36 6 chr15 15613891 15614221 -87880753 - ORR1B2-int LTR MaLR -1169 340 1 1 704 1533 212 21 70 chr15 15614221 15614607 -87880367 - ORR1B2 LTR MaLR 0 367 1 1 704 468 0 0 0 chr15 15614819 15614871 -87880103 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 704 33 0 0 0 chr15 15615609 15615642 -87879332 + AT_rich Low_complexity Low_complexity 1 33 0 1 704 418 298 35 14 chr15 15615743 15615886 -87879088 + MLT2F LTR ERVL 11 156 -507 1 704 380 241 12 0 chr15 15616181 15616264 -87878710 + ORR1C1 LTR MaLR 1 84 -283 1 704 667 211 8 0 chr15 15616268 15616396 -87878578 + ORR1C1 LTR MaLR 250 378 0 1 704 556 290 20 25 chr15 15617744 15617942 -87877032 + ERVL-E-int LTR ERVL 2264 2460 -3207 1 704 1505 148 161 26 chr15 15618174 15618479 -87876495 + Lx LINE L1 6308 6653 -1 1 704 257 256 0 0 chr15 15619468 15619554 -87875420 - Lx9 LINE L1 -14 7630 7545 1 704 266 215 105 21 chr15 15619566 15619661 -87875313 - Lx9 LINE L1 -139 7505 7403 1 704 235 375 16 32 chr15 15619735 15619859 -87875115 - RMER12 LTR ERVK -472 850 729 1 704 780 237 11 114 chr15 15621478 15621613 -87873361 - Lx7 LINE L1 0 7696 7567 1 704 2244 114 11 27 chr15 15621613 15621982 -87872992 + L1_Mus3 LINE L1 6276 6638 0 1 704 780 237 11 114 chr15 15621982 15622204 -87872770 - Lx7 LINE L1 -130 7566 7376 1 704 522 79 0 0 chr15 15623344 15623420 -87871554 + (TC)n Simple_repeat Simple_repeat 1 76 0 1 704 204 135 0 0 chr15 15623419 15623456 -87871518 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 704 30 59 0 0 chr15 15623987 15624038 -87870936 + AT_rich Low_complexity Low_complexity 1 51 0 1 704 2972 134 154 0 chr15 15624043 15624549 -87870425 + MT2B2 LTR ERVL 1 584 0 1 704 5631 148 25 81 chr15 15624553 15625712 -87869262 + MTB_Mm-int LTR MaLR 3 1096 -2 1 704 2582 128 14 31 chr15 15625714 15626127 -87868847 + MTB_Mm LTR MaLR 1 406 -1 1 704 213 94 0 0 chr15 15626697 15626729 -87868245 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 704 21 0 0 0 chr15 15627249 15627270 -87867704 + AT_rich Low_complexity Low_complexity 1 21 0 1 704 511 316 11 45 chr15 15627725 15627904 -87867070 - B3A SINE B2 -1 197 25 1 704 1386 169 4 181 chr15 15628148 15628646 -87866328 - RMER17C LTR ERVK 0 410 1 1 704 519 273 65 53 chr15 15628842 15629179 -87865795 - RLTR9A2 LTR ERVK 0 383 1 1 704 663 78 0 0 chr15 15629454 15629544 -87865430 + (CATATA)n Simple_repeat Simple_repeat 4 93 0 1 704 23 33 0 0 chr15 15630331 15630361 -87864613 + AT_rich Low_complexity Low_complexity 1 30 0 1 704 810 135 0 0 chr15 15630672 15630850 -87864124 + (GGA)n Simple_repeat Simple_repeat 3 180 0 1 704 26 0 0 0 chr15 15631219 15631245 -87863729 + AT_rich Low_complexity Low_complexity 1 26 0 1 704 568 388 46 19 chr15 15631363 15631626 -87863348 - B4A SINE B4 -6 286 17 1 704 26 64 0 0 chr15 15631781 15631828 -87863146 + AT_rich Low_complexity Low_complexity 1 47 0 1 704 7847 60 5 2 chr15 15631889 15633556 -87861418 - L1Md_F2 LINE L1 -3 6579 4911 1 704 12363 72 4 1 chr15 15633556 15635214 -87859760 + L1Md_F2 LINE L1 3222 4883 -1000 1 704 1405 142 73 23 chr15 15635634 15635893 -87859081 + Lx3B LINE L1 6700 6971 -2 1 704 235 245 68 68 chr15 15635996 15636114 -87858860 + RLTR21 LTR ERVK 1010 1127 -445 2 704 571 263 0 0 chr15 15636306 15636439 -87858535 + B1_Mus1 SINE Alu 4 136 -12 2 704 23 0 0 0 chr15 15636631 15636654 -87858320 + AT_rich Low_complexity Low_complexity 1 23 0 2 704 338 327 80 71 chr15 15637631 15637681 -87857293 + L1MD LINE L1 4064 4109 -2037 2 704 1577 170 30 170 chr15 15637681 15638176 -87856798 + RLTR23 LTR ERV1 3 428 -2 2 704 338 327 80 71 chr15 15638176 15638461 -87856513 + L1MD LINE L1 4110 4402 -1744 2 704 2437 221 107 72 chr15 15639117 15639692 -87855282 + RLTR40 LTR ERVK 14 567 -250 2 704 570 98 0 0 chr15 15639692 15639774 -87855200 + (CA)n Simple_repeat Simple_repeat 1 82 0 2 704 2437 221 107 72 chr15 15639774 15639965 -87855009 + RLTR40 LTR ERVK 568 807 -10 2 704 231 270 11 11 chr15 15640235 15640325 -87854649 + L1M2 LINE L1 4537 4626 -1517 2 704 267 321 84 35 chr15 15640384 15640645 -87854329 + L1M2 LINE L1 4712 4985 -1158 2 704 3017 271 83 20 chr15 15640671 15641675 -87853299 + Lx9 LINE L1 6404 7470 -174 2 704 436 63 0 48 chr15 15641704 15641787 -87853187 + (TCTCTG)n Simple_repeat Simple_repeat 4 82 0 2 704 696 59 58 17 chr15 15641787 15641958 -87853016 + (TA)n Simple_repeat Simple_repeat 2 180 0 2 704 256 350 59 92 chr15 15641991 15642381 -87852593 - Lx7 LINE L1 -762 6934 6558 2 704 265 349 18 18 chr15 15642391 15642502 -87852472 + ORR1D1 LTR MaLR 1 111 -263 2 704 445 319 91 29 chr15 15642505 15642747 -87852227 - Lx7 LINE L1 -1173 6523 6267 2 704 277 330 66 38 chr15 15642758 15642941 -87852033 + Lx8 LINE L1 7017 7204 -269 2 704 383 186 23 0 chr15 15643136 15643222 -87851752 + (TATG)n Simple_repeat Simple_repeat 1 88 0 2 704 30 0 0 0 chr15 15643233 15643263 -87851711 + AT_rich Low_complexity Low_complexity 1 30 0 2 704 5122 52 3 1 chr15 15643438 15644088 -87850886 - L1Md_F2 LINE L1 -1 6581 5931 2 704 271 121 35 0 chr15 15644196 15644254 -87850720 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 2 704 568 163 0 39 chr15 15645002 15645155 -87849819 + CT-rich Low_complexity Low_complexity 2 148 0 2 704 21 36 0 0 chr15 15645185 15645213 -87849761 + AT_rich Low_complexity Low_complexity 1 28 0 2 704 507 318 40 9 chr15 15645218 15645443 -87849531 - Lx8 LINE L1 -127 7346 7115 2 704 393 362 15 84 chr15 15645566 15645768 -87849206 - B4 SINE B4 -2 290 103 2 704 530 15 15 0 chr15 15647432 15647499 -87847475 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 704 362 373 21 63 chr15 15648992 15649181 -87845793 + B3A SINE B2 3 183 -15 2 704 180 410 20 53 chr15 15649287 15649532 -87845442 + L2 LINE L2 1888 2124 -1295 2 704 252 0 0 0 chr15 15649551 15649579 -87845395 + (T)n Simple_repeat Simple_repeat 1 28 0 2 704 3926 36 2 0 chr15 15650682 15651154 -87843820 - L1Md_T LINE L1 -179 6403 5931 2 704 2287 247 69 61 chr15 15652302 15652987 -87841987 - RMER1B Other Other -4 1062 373 2 704 30 0 0 0 chr15 15653000 15653030 -87841944 + AT_rich Low_complexity Low_complexity 1 30 0 2 704 1528 244 191 13 chr15 15653164 15653799 -87841175 + Lx9 LINE L1 6897 7644 0 2 704 1043 114 45 11 chr15 15654342 15654520 -87840454 + B2_Mm2 SINE B2 4 187 -8 2 704 255 275 12 0 chr15 15654608 15654688 -87840286 - L1M LINE L1 -908 5392 5312 2 704 22 0 0 0 chr15 15654880 15654902 -87840072 + AT_rich Low_complexity Low_complexity 1 22 0 2 704 429 20 0 0 chr15 15655086 15655136 -87839838 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 704 242 271 54 0 chr15 15655761 15655890 -87839084 - RMER17A LTR ERVK -289 462 327 2 704 1647 206 130 43 chr15 15655945 15656930 -87838044 - L1_Mur3 LINE L1 -3932 1948 888 2 704 3394 64 2 11 chr15 15657213 15657670 -87837304 - L1Md_F2 LINE L1 -17 6565 6113 2 704 745 247 77 51 chr15 15657670 15657943 -87837031 - L1_Mur3 LINE L1 -6909 819 540 2 704 28 61 0 0 chr15 15658208 15658257 -87836717 + AT_rich Low_complexity Low_complexity 1 49 0 2 704 21 36 0 0 chr15 15658723 15658751 -87836223 + AT_rich Low_complexity Low_complexity 1 28 0 2 704 338 258 68 74 chr15 15659680 15659843 -87835131 + MTE-int LTR MaLR 1329 1490 -90 2 704 607 329 40 37 chr15 15659849 15660203 -87834771 + ORR1E LTR MaLR 4 358 -1 2 704 4416 209 24 122 chr15 15660624 15662791 -87832183 + L1_Mur2 LINE L1 3598 5436 -447 2 704 213 108 0 0 chr15 15664069 15664106 -87830868 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 2 704 298 319 66 106 chr15 15664599 15664750 -87830224 + Lx8 LINE L1 7133 7277 -196 2 704 221 83 28 0 chr15 15664787 15664823 -87830151 + (ATG)n Simple_repeat Simple_repeat 3 39 0 2 704 330 156 0 0 chr15 15666542 15666606 -87828368 + (CA)n Simple_repeat Simple_repeat 2 65 0 2 704 261 0 0 0 chr15 15668029 15668058 -87826916 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 2 704 240 59 0 0 chr15 15669899 15669933 -87825041 + (CTAA)n Simple_repeat Simple_repeat 3 36 0 2 704 246 81 0 0 chr15 15669940 15669977 -87824997 + (CAA)n Simple_repeat Simple_repeat 1 37 0 2 704 1010 104 0 20 chr15 15670127 15670274 -87824700 + B1_Mm SINE Alu 4 147 0 2 704 234 0 0 0 chr15 15670433 15670459 -87824515 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2 704 3983 260 19 14 chr15 15670970 15672028 -87822946 + Lx5 LINE L1 6022 7046 -4 2 704 1196 96 0 6 chr15 15672208 15672386 -87822588 + (GAA)n Simple_repeat Simple_repeat 3 179 0 2 704 813 150 0 32 chr15 15672396 15672512 -87822462 + polypurine Low_complexity Low_complexity 1 114 0 2 704 1456 22 0 11 chr15 15672512 15672694 -87822280 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 704 813 150 0 32 chr15 15672694 15672763 -87822211 + polypurine Low_complexity Low_complexity 115 180 0 2 704 248 200 22 22 chr15 15672764 15672856 -87822118 + GA-rich Low_complexity Low_complexity 1 92 0 2 704 24 32 0 0 chr15 15673187 15673218 -87821756 + AT_rich Low_complexity Low_complexity 1 31 0 2 704 201 74 0 0 chr15 15673675 15673702 -87821272 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 2 704 238 300 132 41 chr15 15674125 15674344 -87820630 + HAL1b LINE L1 1359 1597 -412 2 704 555 314 35 30 chr15 15674833 15675030 -87819944 - B3 SINE B2 -18 198 1 2 704 4330 188 20 21 chr15 15676092 15676944 -87818030 + Lx4B LINE L1 5996 6846 -212 2 704 3067 31 0 0 chr15 15677483 15677840 -87817134 - IAPEY2_LTR LTR ERVK 0 357 1 2 704 2857 46 0 0 chr15 15677920 15678266 -87816708 - ORR1A0 LTR MaLR 0 346 1 2 704 529 324 53 23 chr15 15678476 15678810 -87816164 + Lx6 LINE L1 5993 6363 -687 2 704 189 74 0 0 chr15 15678831 15678858 -87816116 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 704 1150 320 53 24 chr15 15678860 15679401 -87815573 + Lx6 LINE L1 6501 7434 -26 2 704 212 59 0 29 chr15 15679789 15679824 -87815150 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 704 260 280 54 36 chr15 15679869 15679980 -87814994 + MLT1C LTR MaLR 350 462 -5 2 704 861 10 0 0 chr15 15680752 15680850 -87814124 + (TTC)n Simple_repeat Simple_repeat 2 99 0 2 704 513 0 0 0 chr15 15681308 15681365 -87813609 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 2 704 22 94 0 0 chr15 15683249 15683313 -87811661 + AT_rich Low_complexity Low_complexity 1 64 0 2 704 312 102 0 0 chr15 15683518 15683567 -87811407 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 704 514 118 21 0 chr15 15683570 15683663 -87811311 + (TA)n Simple_repeat Simple_repeat 2 96 0 2 704 201 196 0 0 chr15 15684246 15684292 -87810682 + (TAG)n Simple_repeat Simple_repeat 3 48 0 2 704 710 143 8 0 chr15 15684290 15684423 -87810551 + GA-rich Low_complexity Low_complexity 3 136 0 2 704 312 70 0 0 chr15 15684801 15684844 -87810130 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 704 219 389 11 11 chr15 15684850 15684941 -87810033 - RSINE1 SINE B4 -14 151 61 2 704 378 367 41 33 chr15 15684959 15685245 -87809729 - L1M4 LINE L1 -603 5559 5270 2 704 441 0 0 0 chr15 15685316 15685365 -87809609 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 704 776 290 25 83 chr15 15685784 15686116 -87808858 + MER67D LTR ERV1 1 343 -368 2 704 381 43 0 0 chr15 15686338 15686385 -87808589 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 704 47 33 0 0 chr15 15686394 15686455 -87808519 + AT_rich Low_complexity Low_complexity 1 61 0 2 704 1461 308 35 12 chr15 15686603 15687086 -87807888 - Lx6 LINE L1 -46 7414 6921 2 704 11028 108 23 10 chr15 15687086 15688813 -87806161 - L1VL4 LINE L1 -874 3043 1294 2 704 378 0 0 0 chr15 15688813 15688855 -87806119 + (TTA)n Simple_repeat Simple_repeat 1 42 0 2 704 11028 178 19 15 chr15 15688855 15689566 -87805408 - L1VL4 LINE L1 -5367 1293 613 2 704 488 241 71 71 chr15 15689604 15689772 -87805202 - L1_Mur3 LINE L1 -1324 4556 4381 2 704 1186 65 12 0 chr15 15689772 15689941 -87805033 + (TTTC)n Simple_repeat Simple_repeat 4 174 0 2 704 488 241 71 71 chr15 15689941 15689982 -87804992 - L1_Mur3 LINE L1 -1500 4380 4347 2 704 281 278 53 46 chr15 15690067 15690237 -87804737 - L1_Mur3 LINE L1 -1720 4160 3989 2 704 261 119 0 0 chr15 15690387 15690429 -87804545 + (CAA)n Simple_repeat Simple_repeat 1 42 0 2 704 521 306 24 29 chr15 15690608 15690817 -87804157 - RMER15 LTR ERVL -5 570 363 2 704 3387 145 17 25 chr15 15690817 15691406 -87803568 + Lx LINE L1 6060 6643 -11 2 704 362 356 73 29 chr15 15691617 15691892 -87803082 + L1M2 LINE L1 4464 4750 -1393 2 704 218 116 23 0 chr15 15691938 15691981 -87802993 + (CAA)n Simple_repeat Simple_repeat 2 45 0 2 704 796 138 0 29 chr15 15692101 15692273 -87802701 + GA-rich Low_complexity Low_complexity 3 169 0 2 704 389 239 103 0 chr15 15692376 15692493 -87802481 + Lx6 LINE L1 7273 7401 -59 2 704 340 231 0 81 chr15 15692482 15692581 -87802393 + Lx7 LINE L1 7606 7696 0 2 704 26 0 0 0 chr15 15692837 15692863 -87802111 + AT_rich Low_complexity Low_complexity 1 26 0 2 704 610 222 238 6 chr15 15693876 15694057 -87800917 + Lx4A LINE L1 6835 7057 -1 2 704 21 0 0 0 chr15 15694172 15694193 -87800781 + AT_rich Low_complexity Low_complexity 1 21 0 2 704 692 71 0 0 chr15 15694356 15694441 -87800533 + L1Md_F3 LINE L1 5502 5586 -297 2 704 7922 35 26 1 chr15 15694441 15695415 -87799559 + L1Md_F3 LINE L1 5587 6584 0 2 704 42 82 0 0 chr15 15695462 15695560 -87799414 + AT_rich Low_complexity Low_complexity 1 98 0 2 704 21 36 0 0 chr15 15695574 15695602 -87799372 + AT_rich Low_complexity Low_complexity 1 28 0 3 704 924 239 44 15 chr15 15695963 15696235 -87798739 - Lx4B LINE L1 -4 7054 6775 3 704 672 142 71 77 chr15 15696881 15697064 -87797910 + Lx2B LINE L1 6805 6986 -14 3 704 238 0 53 26 chr15 15697124 15697162 -87797812 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 704 387 0 0 0 chr15 15697165 15697208 -87797766 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 3 704 28 0 0 0 chr15 15697581 15697609 -87797365 + AT_rich Low_complexity Low_complexity 1 28 0 3 704 30 27 0 0 chr15 15697855 15697892 -87797082 + AT_rich Low_complexity Low_complexity 1 37 0 3 704 961 52 0 111 chr15 15698057 15698229 -87796745 + L1Md_F3 LINE L1 6432 6584 0 3 704 21 0 0 0 chr15 15698512 15698533 -87796441 + AT_rich Low_complexity Low_complexity 1 21 0 3 704 481 355 63 27 chr15 15698785 15699134 -87795840 - Lx8 LINE L1 -994 6702 6351 3 704 674 303 58 11 chr15 15699199 15699563 -87795411 - L1_Mur3 LINE L1 -3422 2458 2078 3 704 610 257 133 37 chr15 15699795 15700013 -87794961 - Lx8 LINE L1 -271 7202 6964 3 704 21 36 0 0 chr15 15700031 15700059 -87794915 + AT_rich Low_complexity Low_complexity 1 28 0 3 704 384 309 24 0 chr15 15700623 15700746 -87794228 + Lx8 LINE L1 6543 6668 -805 3 704 894 311 103 57 chr15 15700746 15701203 -87793771 + MTC-int LTR MaLR 552 1029 -229 3 704 10505 13 0 0 chr15 15701203 15702418 -87792556 - L1_Mm LINE L1 -1360 4523 3309 3 704 378 262 50 76 chr15 15702427 15702625 -87792349 + MTC-int LTR MaLR 1066 1258 0 3 704 292 224 15 15 chr15 15702674 15702742 -87792232 + MTC LTR MaLR 15 82 -339 3 704 2036 151 3 3 chr15 15702805 15703124 -87791850 - ORR1A2 LTR MaLR -8 319 1 3 704 4423 207 114 26 chr15 15703125 15704763 -87790211 - ORR1A2-int LTR MaLR -1 1791 1 3 704 1740 131 110 0 chr15 15704763 15705054 -87789920 - ORR1A2 LTR MaLR 0 327 5 3 704 304 111 0 27 chr15 15705057 15705131 -87789843 + (TAAAAA)n Simple_repeat Simple_repeat 6 77 0 3 704 831 302 52 26 chr15 15705363 15705710 -87789264 - Lx8 LINE L1 -804 6669 6314 3 704 245 262 0 15 chr15 15705760 15705826 -87789148 + B4 SINE B4 6 70 -222 3 704 489 194 18 18 chr15 15705861 15706024 -87788950 + (TA)n Simple_repeat Simple_repeat 1 163 0 3 704 36 102 0 0 chr15 15706031 15706158 -87788816 + AT_rich Low_complexity Low_complexity 1 127 0 3 704 240 395 58 73 chr15 15706164 15706355 -87788619 - B3A SINE B2 -8 190 3 3 704 906 10 0 0 chr15 15706452 15706555 -87788419 + (GA)n Simple_repeat Simple_repeat 1 103 0 3 704 694 210 51 0 chr15 15706627 15706765 -87788209 + RMER6C LTR ERVK 1 145 -545 3 704 325 276 0 0 chr15 15706747 15706823 -87788151 + MT2B LTR ERVL 181 256 -345 3 704 1125 169 0 36 chr15 15707475 15707696 -87787278 - L1_Mur2 LINE L1 -1956 3921 3709 3 704 2320 235 78 3 chr15 15707697 15708265 -87786709 + Lx2B LINE L1 6387 6996 -4 3 704 2440 166 5 25 chr15 15708951 15709390 -87785584 - Lx3C LINE L1 -2 6974 6545 3 704 3262 39 3 0 chr15 15709479 15709863 -87785111 - IAPEY_LTR LTR ERVK 0 385 1 3 704 876 338 100 41 chr15 15710031 15710833 -87784141 - Lx8 LINE L1 -1 7472 6624 3 704 34 24 0 0 chr15 15713550 15713591 -87781383 + AT_rich Low_complexity Low_complexity 1 41 0 3 704 5216 111 17 1 chr15 15713603 15714372 -87780602 - L1_Mus3 LINE L1 0 6638 5858 3 704 3193 52 3 0 chr15 15714529 15714913 -87780061 - IAPEY_LTR LTR ERVK 0 385 1 3 704 21649 48 5 6 chr15 15714913 15717626 -87777348 - IAPEy-int LTR ERVK 0 7513 4804 3 704 6694 101 50 9 chr15 15717626 15718642 -87776332 - IAPEy-int LTR ERVK -6455 1058 1 3 704 3193 52 3 0 chr15 15718642 15719026 -87775948 - IAPEY_LTR LTR ERVK 0 385 1 3 704 265 312 91 14 chr15 15719095 15719303 -87775671 - Lx8 LINE L1 -662 6811 6588 3 704 2397 198 47 52 chr15 15719355 15719914 -87775060 - Lx2B LINE L1 -5 6995 6440 3 704 554 261 93 25 chr15 15721790 15721994 -87772980 - RLTR45 LTR ERVK 0 482 265 3 704 22 56 0 0 chr15 15722239 15722275 -87772699 + AT_rich Low_complexity Low_complexity 1 36 0 3 704 453 103 0 0 chr15 15722368 15722436 -87772538 + (CA)n Simple_repeat Simple_repeat 1 68 0 3 704 474 165 0 0 chr15 15722652 15722755 -87772219 + T-rich Low_complexity Low_complexity 1 103 0 3 704 399 168 21 150 chr15 15722964 15723104 -87771870 + Lx3A LINE L1 6860 6981 0 3 704 464 333 130 36 chr15 15723270 15723600 -87771374 + MTB_Mm LTR MaLR 1 361 -46 3 704 303 49 0 0 chr15 15724880 15724921 -87770053 + (TTG)n Simple_repeat Simple_repeat 2 42 0 3 704 324 102 0 0 chr15 15724970 15725019 -87769955 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 704 242 319 20 71 chr15 15725065 15725163 -87769811 - RSINE1 SINE B4 -71 94 2 3 704 51 70 0 0 chr15 15725470 15725570 -87769404 + AT_rich Low_complexity Low_complexity 1 100 0 3 704 789 292 107 70 chr15 15725673 15725945 -87769029 + Lx9 LINE L1 6958 7221 -423 3 704 1045 97 7 7 chr15 15725945 15726091 -87768883 - B1_Mus1 SINE Alu -2 146 1 3 704 789 292 107 70 chr15 15726091 15726321 -87768653 + Lx9 LINE L1 7222 7450 -194 3 704 1164 55 7 0 chr15 15726321 15726467 -87768507 + B1_Mus1 SINE Alu 2 148 0 3 704 789 292 107 70 chr15 15726467 15726625 -87768349 + Lx9 LINE L1 7451 7643 -1 3 704 4660 111 37 8 chr15 15726639 15727375 -87767599 - Lx2 LINE L1 -631 6366 5610 3 704 3618 139 24 19 chr15 15727375 15727989 -87766985 + Lx2 LINE L1 6374 6990 -7 3 705 496 390 23 0 chr15 15729048 15729220 -87765754 - B3 SINE B2 -28 188 13 3 705 497 162 19 0 chr15 15729254 15729359 -87765615 - Lx9 LINE L1 0 7644 7538 3 705 24 0 0 0 chr15 15729918 15729942 -87765032 + AT_rich Low_complexity Low_complexity 1 24 0 3 705 219 150 0 0 chr15 15729976 15730016 -87764958 + (A)n Simple_repeat Simple_repeat 1 40 0 3 705 7660 56 2 26 chr15 15730179 15731776 -87763198 + L1Md_F2 LINE L1 5002 6561 -21 3 705 298 42 42 0 chr15 15731776 15731824 -87763150 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 705 678 356 83 20 chr15 15731825 15732329 -87762645 + Lx8 LINE L1 6742 7277 -196 3 705 416 260 115 23 chr15 15732416 15732546 -87762428 - B1_Mus2 SINE Alu 0 147 6 3 705 370 284 26 44 chr15 15732444 15732558 -87762416 - MT2B LTR ERVL -332 269 158 3 705 2411 224 40 25 chr15 15732559 15733157 -87761817 - ORR1B2-int LTR MaLR -889 620 14 3 705 1020 231 65 20 chr15 15733157 15733404 -87761570 - ORR1B2 LTR MaLR 0 367 110 3 705 353 234 53 11 chr15 15733497 15733592 -87761382 - ORR1B2 LTR MaLR -266 101 3 3 705 22 80 0 0 chr15 15733926 15733976 -87760998 + AT_rich Low_complexity Low_complexity 1 50 0 3 705 1013 238 117 0 chr15 15734993 15735266 -87759708 - ORR1A3 LTR MaLR -21 305 1 3 705 22 0 0 0 chr15 15735268 15735290 -87759684 + AT_rich Low_complexity Low_complexity 1 22 0 3 705 241 190 0 17 chr15 15735326 15735385 -87759589 + (ATG)n Simple_repeat Simple_repeat 2 59 0 3 705 21 0 0 0 chr15 15735780 15735801 -87759173 + AT_rich Low_complexity Low_complexity 1 21 0 3 705 22 0 0 0 chr15 15736065 15736087 -87758887 + AT_rich Low_complexity Low_complexity 1 22 0 3 705 304 241 0 12 chr15 15738134 15738218 -87756756 + MTD LTR MaLR 8 90 -329 3 705 503 259 139 12 chr15 15738210 15738382 -87756592 + MTD LTR MaLR 226 419 0 3 705 4140 176 24 43 chr15 15739088 15739981 -87754993 - L1_Mur2 LINE L1 -1680 4197 3322 3 705 8298 34 0 3 chr15 15739985 15740972 -87754002 - L1Md_F2 LINE L1 -12 6570 5587 3 705 1136 52 0 0 chr15 15740975 15741110 -87753864 + L1Md_F2 LINE L1 5449 5583 -300 3 705 479 96 48 0 chr15 15741678 15741782 -87753192 + (TAGA)n Simple_repeat Simple_repeat 4 112 0 3 705 1211 293 124 26 chr15 15742043 15742582 -87752392 + MER67B LTR ERV1 70 661 0 3 705 282 358 97 15 chr15 15742712 15742908 -87752066 + MLT2E LTR ERVL 192 403 -225 3 705 232 250 0 55 chr15 15742937 15742992 -87751982 - B1F SINE Alu -3 146 95 3 705 383 328 144 52 chr15 15743125 15743472 -87751502 + MLT1H-int LTR MaLR 776 1154 -255 3 705 22 35 0 0 chr15 15743524 15743553 -87751421 + AT_rich Low_complexity Low_complexity 1 29 0 3 705 238 339 32 41 chr15 15743810 15743933 -87751041 + MLT1E1A LTR MaLR 559 680 0 3 705 292 258 120 38 chr15 15743975 15744108 -87750866 - MTE2b LTR MaLR -14 365 222 3 705 832 175 6 0 chr15 15744661 15744821 -87750153 - L1_Mur2 LINE L1 -426 5451 5291 3 705 330 26 0 0 chr15 15744821 15744860 -87750114 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 3 705 8053 123 22 14 chr15 15744860 15746123 -87748851 - Lx3A LINE L1 -13 6968 5695 3 705 3972 168 22 4 chr15 15746121 15746888 -87748086 - L1_Mur2 LINE L1 -1371 4506 3726 3 705 4064 182 38 5 chr15 15746880 15747671 -87747303 + L1_Mm LINE L1 5060 5876 -7 3 705 3435 146 77 0 chr15 15747671 15748255 -87746719 + Lx LINE L1 6026 6654 0 3 705 297 0 0 0 chr15 15748715 15748748 -87746226 + (TAGA)n Simple_repeat Simple_repeat 4 36 0 3 705 832 258 15 10 chr15 15749497 15749693 -87745281 + RMER1B Other Other 44 240 -826 3 705 1689 260 158 7 chr15 15749690 15750304 -87744670 + RMER1B Other Other 175 1066 0 3 705 1037 114 0 0 chr15 15750319 15750459 -87744515 + B1_Mus1 SINE Alu 2 141 -7 3 705 324 0 0 0 chr15 15750468 15750504 -87744470 + (TAA)n Simple_repeat Simple_repeat 1 36 0 3 705 539 66 13 0 chr15 15750502 15750578 -87744396 + (GAA)n Simple_repeat Simple_repeat 2 78 0 3 705 519 164 260 13 chr15 15750647 15750801 -87744173 + B2_Mm1t SINE B2 2 193 0 3 705 1806 204 39 11 chr15 15751146 15751502 -87743472 + MTC LTR MaLR 2 367 -54 3 705 258 105 0 0 chr15 15754421 15754459 -87740515 + (CTTG)n Simple_repeat Simple_repeat 2 39 0 3 705 449 374 23 0 chr15 15754474 15754605 -87740369 - RSINE1 SINE B4 -17 148 15 3 705 1165 258 0 4 chr15 15755042 15755299 -87739675 + Lx2B LINE L1 6745 7000 0 3 705 336 268 138 11 chr15 15755377 15755551 -87739423 + L1MA9 LINE L1 6101 6296 -16 3 705 1444 70 45 0 chr15 15755635 15755834 -87739140 + L1_Mus2 LINE L1 6359 6566 0 3 705 297 0 0 0 chr15 15756057 15756090 -87738884 + (TC)n Simple_repeat Simple_repeat 2 34 0 3 705 531 82 0 0 chr15 15756090 15756162 -87738812 + (TA)n Simple_repeat Simple_repeat 2 74 0 3 705 1586 204 62 24 chr15 15756913 15757249 -87737725 + ORR1B1 LTR MaLR 39 387 -7 3 705 422 250 17 35 chr15 15757414 15757530 -87737444 + RMER15 LTR ERVL 340 453 -122 3 705 220 133 33 0 chr15 15758476 15758536 -87736438 + (TA)n Simple_repeat Simple_repeat 1 62 0 3 705 645 14 0 0 chr15 15758549 15758623 -87736351 + (CATATA)n Simple_repeat Simple_repeat 5 78 0 3 705 203 179 0 0 chr15 15759630 15759669 -87735305 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 705 28 0 0 0 chr15 15759778 15759806 -87735168 + AT_rich Low_complexity Low_complexity 1 28 0 4 705 25 83 0 0 chr15 15760456 15760516 -87734458 + AT_rich Low_complexity Low_complexity 1 60 0 4 705 321 125 14 14 chr15 15760964 15761114 -87733860 + (CAGA)n Simple_repeat Simple_repeat 1 150 0 4 705 702 113 0 0 chr15 15761129 15761253 -87733721 + (CA)n Simple_repeat Simple_repeat 2 125 0 4 705 332 331 12 55 chr15 15761320 15761483 -87733491 - RLTR40 LTR ERVK -598 219 64 4 705 426 273 109 0 chr15 15761655 15761723 -87733251 - MTD LTR MaLR 0 419 345 4 705 279 0 0 0 chr15 15761723 15761754 -87733220 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 705 426 273 109 0 chr15 15761754 15761813 -87733161 - MTD LTR MaLR -75 344 279 4 705 845 92 0 0 chr15 15761813 15761932 -87733042 - L1_Mus1 LINE L1 -582 5985 5867 4 705 319 383 82 18 chr15 15761932 15762102 -87732872 - MTD LTR MaLR -143 278 98 4 705 1411 209 69 0 chr15 15762737 15763057 -87731917 - RMER6C LTR ERVK 0 690 349 4 705 294 277 71 41 chr15 15763069 15763167 -87731807 - B1_Mm SINE Alu -29 118 18 4 705 344 193 0 0 chr15 15763111 15763168 -87731806 - MT2B LTR ERVL -364 237 181 4 705 588 167 28 9 chr15 15763152 15763261 -87731713 - RMER6C LTR ERVK -579 111 1 4 705 516 93 0 0 chr15 15763286 15763361 -87731613 + (CGTG)n Simple_repeat Simple_repeat 1 75 0 4 705 306 271 0 0 chr15 15763494 15763564 -87731410 - ORR1D-int LTR MaLR -48 1322 1253 4 705 1993 232 14 12 chr15 15763564 15764083 -87730891 - L1_Mur2 LINE L1 -772 5105 4586 4 705 3211 201 74 95 chr15 15764083 15764401 -87730573 + RMER13A LTR ERVK 1 312 -548 4 705 4539 107 124 3 chr15 15764401 15765135 -87729839 - L1_Mus3 LINE L1 -1 6637 5815 4 705 3211 201 74 95 chr15 15765135 15765669 -87729305 + RMER13A LTR ERVK 313 835 -25 4 705 21 0 0 0 chr15 15766253 15766274 -87728700 + AT_rich Low_complexity Low_complexity 1 21 0 4 705 7663 71 0 2 chr15 15766637 15768026 -87726948 - L1Md_F2 LINE L1 0 6582 5199 4 705 23 0 0 0 chr15 15768069 15768092 -87726882 + AT_rich Low_complexity Low_complexity 1 23 0 4 705 7278 62 30 10 chr15 15768212 15768867 -87726107 - L1_Mus1 LINE L1 0 6567 5888 4 705 6925 95 29 8 chr15 15768867 15769869 -87725105 + RLTR13D5 LTR ERVK 1 1023 0 4 705 7278 80 21 8 chr15 15769869 15770320 -87724654 - L1_Mus1 LINE L1 -680 5887 5441 4 705 507 294 0 38 chr15 15771026 15771157 -87723817 - B1_Mur4 SINE Alu 0 150 25 4 705 229 348 52 84 chr15 15771034 15771188 -87723786 - B4 SINE B4 -69 223 75 4 705 423 0 0 0 chr15 15771225 15771272 -87723702 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 705 249 33 0 0 chr15 15772218 15772248 -87722726 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 705 7890 204 43 56 chr15 15774173 15776960 -87718014 - Lx2 LINE L1 0 6997 4270 4 705 1434 247 88 43 chr15 15776961 15777023 -87717951 - RMER5 LTR ERV1 -26 508 432 4 705 4558 78 2 8 chr15 15777023 15777644 -87717330 + L1Md_F2 LINE L1 5964 6580 -2 4 705 1434 247 88 43 chr15 15777644 15778046 -87716928 - RMER5 LTR ERV1 -103 431 24 4 705 540 327 179 9 chr15 15779387 15779601 -87715373 - MTE2b LTR MaLR -122 257 7 4 705 405 0 0 0 chr15 15779668 15779713 -87715261 + (T)n Simple_repeat Simple_repeat 1 45 0 4 705 265 355 91 50 chr15 15779926 15780246 -87714728 + L2 LINE L2 2233 2565 -854 4 705 259 320 13 0 chr15 15780781 15780856 -87714118 - PB1D10 SINE Alu -15 102 27 4 705 1528 212 56 31 chr15 15780895 15781251 -87713723 - Lx5 LINE L1 -11 7039 6675 4 705 1256 199 76 11 chr15 15781246 15781510 -87713464 + Lx5 LINE L1 6289 6569 -481 4 705 21 57 0 0 chr15 15782210 15782245 -87712729 + AT_rich Low_complexity Low_complexity 1 35 0 4 705 22 0 0 0 chr15 15782386 15782408 -87712566 + AT_rich Low_complexity Low_complexity 1 22 0 4 705 686 336 44 26 chr15 15782412 15783030 -87711944 + L1M3 LINE L1 4398 5026 -1114 4 705 342 0 0 0 chr15 15783395 15783433 -87711541 + (TTG)n Simple_repeat Simple_repeat 2 39 0 4 705 254 414 7 15 chr15 15784004 15784139 -87710835 + B4 SINE B4 6 139 -153 4 705 935 148 0 0 chr15 15784692 15784834 -87710140 - B1_Mus2 SINE Alu -1 146 5 4 705 721 134 0 26 chr15 15784866 15784981 -87709993 - RLTR19C LTR ERVK -43 463 352 4 705 267 73 55 0 chr15 15784986 15785041 -87709933 + (TTTTTG)n Simple_repeat Simple_repeat 3 60 0 4 705 1949 132 0 7 chr15 15785041 15785347 -87709627 - RLTR19C LTR ERVK -166 340 37 4 705 447 19 0 0 chr15 15785738 15785790 -87709184 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 705 564 335 16 27 chr15 15785810 15785994 -87708980 + B3A SINE B2 6 187 -11 4 705 413 314 56 16 chr15 15785993 15786014 -87708960 + B4 SINE B4 64 89 -203 4 705 540 259 0 0 chr15 15786014 15786126 -87708848 + B1_Mur2 SINE Alu 1 112 -37 4 705 26 0 0 0 chr15 15786133 15786159 -87708815 + AT_rich Low_complexity Low_complexity 1 26 0 4 705 639 233 16 0 chr15 15786332 15786461 -87708513 - B1_Mur2 SINE Alu -14 135 5 4 705 540 327 48 10 chr15 15786572 15786779 -87708195 + B3 SINE B2 2 216 0 4 705 694 266 40 0 chr15 15787262 15787439 -87707535 + RLTR19-int LTR ERVK 5415 5598 -539 4 705 306 308 111 0 chr15 15788867 15788984 -87705990 + ORR1A4 LTR MaLR 4 133 -226 4 705 4082 134 37 10 chr15 15788988 15789661 -87705313 + Lx2A LINE L1 6318 7008 0 4 705 254 316 59 30 chr15 15789664 15789765 -87705209 + ORR1A4 LTR MaLR 146 249 -121 4 705 306 182 14 57 chr15 15789736 15789806 -87705168 + ORR1A4 LTR MaLR 89 155 -174 4 705 8601 171 77 85 chr15 15789823 15790757 -87704217 + ORR1A4-int LTR MaLR 2 973 -990 4 705 2596 43 21 3 chr15 15790757 15791085 -87703889 + L1Md_F3 LINE L1 6251 6584 0 4 705 8601 171 77 85 chr15 15791085 15792128 -87702846 + ORR1A4-int LTR MaLR 974 1963 0 4 705 1714 203 12 9 chr15 15792128 15792456 -87702518 + ORR1A4 LTR MaLR 1 329 0 4 705 5256 265 64 42 chr15 15792479 15793370 -87701604 + L1_Rod LINE L1 1000 1927 -3920 4 705 426 39 0 0 chr15 15793370 15793422 -87701552 + (CAAAA)n Simple_repeat Simple_repeat 1 52 0 4 705 5256 269 91 61 chr15 15793422 15796033 -87698941 + L1_Rod LINE L1 1928 4601 -1246 4 705 388 310 76 60 chr15 15796546 15796731 -87698243 + RLTR23 LTR ERV1 1 188 -242 4 705 26 64 0 0 chr15 15796936 15796983 -87697991 + AT_rich Low_complexity Low_complexity 1 47 0 4 705 3473 219 78 38 chr15 15797137 15798144 -87696830 + Lx2B LINE L1 5909 6955 -45 4 705 209 346 23 16 chr15 15799485 15799614 -87695360 + CT-rich Low_complexity Low_complexity 1 130 0 4 705 408 40 0 0 chr15 15800241 15800291 -87694683 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 705 768 268 31 10 chr15 15801198 15801394 -87693580 + B3 SINE B2 11 210 -6 4 705 288 0 0 0 chr15 15801410 15801442 -87693532 + (T)n Simple_repeat Simple_repeat 1 32 0 4 705 1375 180 62 93 chr15 15801465 15801789 -87693185 + ORR1A4 LTR MaLR 1 314 -15 4 705 28 48 0 0 chr15 15801868 15801910 -87693064 + AT_rich Low_complexity Low_complexity 1 42 0 4 705 23 0 0 0 chr15 15804449 15804472 -87690502 + AT_rich Low_complexity Low_complexity 1 23 0 4 705 1810 189 81 0 chr15 15805039 15805409 -87689565 - Lx3C LINE L1 -2 6974 6575 4 705 2568 274 79 20 chr15 15805833 15806812 -87688162 - Lx9 LINE L1 -4 7640 6605 4 705 667 273 51 108 chr15 15807923 15808412 -87686562 + L1_Rod LINE L1 4033 4493 -1387 4 705 1628 198 75 36 chr15 15808423 15808673 -87686301 + Lx4A LINE L1 6120 6371 -687 4 705 213 39 0 0 chr15 15808673 15808699 -87686275 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 4 705 1628 198 75 36 chr15 15808699 15808781 -87686193 + Lx4A LINE L1 6372 6473 -585 4 705 2824 16 0 0 chr15 15808781 15809103 -87685871 - RLTRETN_Mm LTR ERVK 0 322 1 4 705 1628 198 75 36 chr15 15809103 15809131 -87685843 + Lx4A LINE L1 6474 6495 -563 4 705 19046 103 11 3 chr15 15809131 15810610 -87684364 + L1_Mus1 LINE L1 3038 4535 -1348 4 705 3716 62 19 0 chr15 15810610 15811074 -87683900 - MT2C_Mm LTR ERVL 0 475 3 4 705 19046 95 9 2 chr15 15811074 15813098 -87681876 + L1_Mus1 LINE L1 4536 6566 -1 4 705 3375 171 12 26 chr15 15813109 15813696 -87681278 + Lx4A LINE L1 6480 7058 0 4 705 852 284 194 0 chr15 15813716 15814016 -87680958 + ORR1C1 LTR MaLR 21 378 0 4 705 1927 288 37 33 chr15 15814026 15815069 -87679905 + Lx9 LINE L1 5020 6104 -1540 4 705 243 0 0 0 chr15 15815154 15815181 -87679793 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 705 1337 332 64 42 chr15 15815188 15815990 -87678984 + Lx9 LINE L1 6348 7166 -478 4 705 297 0 0 0 chr15 15816205 15816238 -87678736 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 705 382 355 51 13 chr15 15816856 15817013 -87677961 + ORR1D2 LTR MaLR 5 167 -203 4 705 1055 213 111 44 chr15 15817076 15817419 -87677555 + RMER10A LTR ERVL 77 442 0 4 705 260 339 39 31 chr15 15817419 15817534 -87677440 + ORR1D2 LTR MaLR 255 370 0 4 705 23 33 0 0 chr15 15817575 15817605 -87677369 + AT_rich Low_complexity Low_complexity 1 30 0 4 705 216 182 0 0 chr15 15817616 15817660 -87677314 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 705 515 283 83 0 chr15 15818025 15818205 -87676769 + MTEb LTR MaLR 185 379 0 4 705 3879 47 0 10 chr15 15818403 15818893 -87676081 - L1Md_F3 LINE L1 -3 6581 6097 4 705 189 107 0 0 chr15 15819371 15819399 -87675575 + (T)n Simple_repeat Simple_repeat 1 28 0 4 705 33 0 0 0 chr15 15819886 15819919 -87675055 + AT_rich Low_complexity Low_complexity 1 33 0 4 705 263 283 31 81 chr15 15820292 15820460 -87674514 - RSINE1 SINE B4 0 165 7 4 705 1578 107 4 8 chr15 15820969 15821214 -87673760 + Lx LINE L1 6403 6646 -8 4 705 274 174 51 25 chr15 15821754 15821872 -87673102 + (TA)n Simple_repeat Simple_repeat 1 121 0 4 705 595 234 7 7 chr15 15821920 15822066 -87672908 - B1_Mur4 SINE Alu 0 150 5 4 705 3161 98 47 12 chr15 15822507 15822992 -87671982 - Lx3_Mus LINE L1 -5 7004 6503 4 705 1069 95 7 0 chr15 15823081 15823228 -87671746 - B1_Mus1 SINE Alu 0 148 1 4 705 21 0 0 0 chr15 15823419 15823440 -87671534 + AT_rich Low_complexity Low_complexity 1 21 0 4 705 27 0 0 0 chr15 15823797 15823824 -87671150 + AT_rich Low_complexity Low_complexity 1 27 0 4 705 389 291 20 54 chr15 15825168 15825317 -87669657 - B4 SINE B4 0 292 149 4 705 259 309 24 0 chr15 15825613 15825697 -87669277 - Lx8 LINE L1 -143 7330 7245 4 705 974 85 8 0 chr15 15827623 15827752 -87667222 - B1_Mus1 SINE Alu -17 131 2 4 705 391 58 58 0 chr15 15827988 15828057 -87666917 + (TCTG)n Simple_repeat Simple_repeat 2 74 0 4 705 200 215 18 18 chr15 15828058 15828167 -87666807 + (TA)n Simple_repeat Simple_repeat 2 110 0 4 705 839 280 36 113 chr15 15828176 15828634 -87666340 - MT2B LTR ERVL -83 518 1 4 705 684 189 20 7 chr15 15828923 15829072 -87665902 - Lx3B LINE L1 0 6973 6823 4 705 25 31 0 0 chr15 15829279 15829311 -87665663 + AT_rich Low_complexity Low_complexity 1 32 0 5 705 4107 112 13 13 chr15 15829475 15830101 -87664873 + L1_Mus3 LINE L1 6012 6637 -1 5 705 397 143 19 28 chr15 15830368 15830476 -87664498 + Lx LINE L1 6544 6650 -4 5 705 25 51 0 0 chr15 15831981 15832020 -87662954 + AT_rich Low_complexity Low_complexity 1 39 0 5 705 38041 29 0 0 chr15 15832020 15838443 -87656531 - L1Md_T LINE L1 0 6585 66 5 705 287 355 18 53 chr15 15838606 15838623 -87656351 - RSINE1 SINE B4 0 165 152 5 705 461 47 16 0 chr15 15838623 15838687 -87656287 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 705 287 355 18 53 chr15 15838687 15838782 -87656192 - RSINE1 SINE B4 -14 151 57 5 705 13015 146 60 5 chr15 15838891 15842384 -87652590 + L1VL4 LINE L1 549 4450 -1436 5 705 35388 35 0 1 chr15 15844286 15849496 -87645478 + L1Md_T LINE L1 285 5589 -297 5 705 8861 7 3 0 chr15 15849496 15850489 -87644485 + L1Md_T LINE L1 5590 6585 0 5 705 6942 188 22 14 chr15 15850716 15852143 -87642831 + Lx3C LINE L1 5535 6971 -5 5 705 302 351 46 53 chr15 15852156 15852418 -87642556 + L1M5 LINE L1 5328 5587 -592 5 705 3498 85 30 0 chr15 15852642 15853134 -87641840 + Lx LINE L1 5626 6132 -522 5 705 800 241 10 5 chr15 15853122 15853326 -87641648 + Lx LINE L1 6435 6639 -15 5 705 286 116 0 0 chr15 15853324 15853367 -87641607 - L1_Mur1 LINE L1 -1117 4769 4727 5 705 7345 118 17 3 chr15 15853359 15855278 -87639696 + L1_Mus3 LINE L1 4688 6634 -4 5 705 23 0 0 0 chr15 15856290 15856313 -87638661 + AT_rich Low_complexity Low_complexity 1 23 0 5 705 258 348 59 59 chr15 15856354 15856447 -87638527 - RSINE1 SINE B4 -38 127 31 5 705 2927 176 56 31 chr15 15856447 15857033 -87637941 - MT2B LTR ERVL 0 601 1 5 705 258 348 59 59 chr15 15857033 15857058 -87637916 - RSINE1 SINE B4 -135 30 9 5 705 21 0 0 0 chr15 15858301 15858322 -87636652 + AT_rich Low_complexity Low_complexity 1 21 0 5 705 569 260 63 0 chr15 15858383 15858510 -87636464 + B1_Mus2 SINE Alu 6 140 -7 5 705 253 303 50 20 chr15 15858792 15858893 -87636081 - MIRb SINE MIR -143 125 22 5 88 3323 41 5 0 chr15 15859482 15859876 -87635098 - MTA_Mm LTR MaLR 0 396 1 5 706 227 207 0 35 chr15 15860070 15860155 -87634819 + CT-rich Low_complexity Low_complexity 4 85 0 5 706 424 374 98 14 chr15 15860216 15860493 -87634481 - MLT1A0 LTR MaLR -57 308 9 5 706 35 0 0 0 chr15 15860619 15860654 -87634320 + AT_rich Low_complexity Low_complexity 1 35 0 5 706 3219 187 145 15 chr15 15860654 15861725 -87633249 - Lx4B LINE L1 -68 6990 5781 5 706 18742 150 91 59 chr15 15861716 15865387 -87629587 - L1Md_F2 LINE L1 -2 6580 2699 5 706 4377 45 0 0 chr15 15865387 15865937 -87629037 - MT-int LTR MaLR -77 1021 472 5 706 18742 150 91 59 chr15 15865937 15868157 -87626817 - L1Md_F2 LINE L1 -2 2698 350 5 706 6034 182 63 84 chr15 15868157 15869692 -87625282 - L1_Mur2 LINE L1 -85 5792 4290 5 706 1676 177 51 11 chr15 15869676 15870031 -87624943 + L1_Mur2 LINE L1 3920 4288 -1589 5 706 33 43 0 0 chr15 15870709 15870756 -87624218 + AT_rich Low_complexity Low_complexity 1 47 0 5 706 496 42 14 14 chr15 15871549 15871621 -87623353 + (TA)n Simple_repeat Simple_repeat 2 73 0 5 706 229 191 46 37 chr15 15872008 15872117 -87622857 + (TA)n Simple_repeat Simple_repeat 1 110 0 5 706 23 33 0 0 chr15 15872138 15872168 -87622806 + AT_rich Low_complexity Low_complexity 1 30 0 5 706 21 36 0 0 chr15 15872405 15872433 -87622541 + AT_rich Low_complexity Low_complexity 1 28 0 5 706 310 322 0 0 chr15 15874372 15874459 -87620515 + Lx8 LINE L1 7035 7121 -352 5 706 247 372 8 8 chr15 15874662 15874792 -87620182 + L1MC3 LINE L1 6474 6603 -1182 5 706 5107 138 87 13 chr15 15874885 15875791 -87619183 + Lx3A LINE L1 6000 6972 -9 5 706 681 66 0 0 chr15 15876955 15877046 -87617928 + (TA)n Simple_repeat Simple_repeat 1 91 0 5 706 231 114 0 0 chr15 15877047 15877082 -87617892 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 5 706 1137 62 0 0 chr15 15877150 15877296 -87617678 - B1_Mus1 SINE Alu -2 146 1 5 706 21 36 0 0 chr15 15877605 15877633 -87617341 + AT_rich Low_complexity Low_complexity 1 28 0 5 706 2071 246 100 18 chr15 15877910 15878355 -87616619 + RMER20B LTR ERVK 2 465 -162 5 706 414 0 0 0 chr15 15878355 15878401 -87616573 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 706 387 0 0 0 chr15 15878401 15878443 -87616531 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 706 2071 246 100 18 chr15 15878443 15878547 -87616427 + RMER20B LTR ERVK 466 596 -31 5 706 531 0 0 0 chr15 15878611 15878670 -87616304 + (GA)n Simple_repeat Simple_repeat 1 59 0 5 706 4735 160 44 19 chr15 15878839 15879780 -87615194 - Lx2B LINE L1 -115 6885 6001 5 706 272 135 0 0 chr15 15879829 15879866 -87615108 - Lx2B LINE L1 -1003 5997 5961 5 706 4537 168 44 102 chr15 15879861 15880235 -87614739 + Lx2B LINE L1 4347 4728 -1149 5 706 354 23 0 0 chr15 15880235 15880278 -87614696 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 706 4537 168 44 102 chr15 15880278 15880947 -87614027 + Lx2B LINE L1 4729 5327 -550 5 706 373 0 38 19 chr15 15880947 15881000 -87613974 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 5 706 836 143 7 28 chr15 15881000 15881144 -87613830 - B1_Mus1 SINE Alu -3 145 5 5 706 4537 168 44 102 chr15 15881144 15881262 -87613712 + Lx2B LINE L1 5328 5440 -437 5 706 191 32 0 61 chr15 15881262 15881295 -87613679 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 706 7249 126 16 0 chr15 15881340 15882071 -87612903 + L1_Mus3 LINE L1 5047 5789 -94 5 706 288 0 0 0 chr15 15882071 15882103 -87612871 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 5 706 7249 94 21 1 chr15 15882103 15882936 -87612038 + L1_Mus3 LINE L1 5790 6636 -2 5 706 2302 174 0 5 chr15 15882936 15883389 -87611585 + Lx2B LINE L1 5535 5991 -1009 5 706 217 240 9 28 chr15 15883597 15883704 -87611270 + CT-rich Low_complexity Low_complexity 3 107 0 5 706 349 98 71 0 chr15 15883798 15883910 -87611064 + (TA)n Simple_repeat Simple_repeat 2 121 0 5 706 21 82 0 0 chr15 15884103 15884152 -87610822 + AT_rich Low_complexity Low_complexity 1 49 0 5 706 793 286 87 0 chr15 15884251 15884482 -87610492 + MTD LTR MaLR 113 363 -56 5 706 210 150 0 0 chr15 15884816 15884856 -87610118 + (A)n Simple_repeat Simple_repeat 1 40 0 5 706 24 77 0 0 chr15 15885514 15885566 -87609408 + AT_rich Low_complexity Low_complexity 1 52 0 5 706 40 79 0 0 chr15 15885744 15885833 -87609141 + AT_rich Low_complexity Low_complexity 1 89 0 5 706 309 51 0 0 chr15 15886495 15886534 -87608440 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 706 2864 246 16 5 chr15 15886887 15887512 -87607462 - Lx5 LINE L1 -3 7047 6416 5 706 459 35 0 0 chr15 15888949 15889006 -87605968 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 706 1043 259 117 110 chr15 15889040 15889413 -87605561 - RMER6D LTR ERVK -33 687 347 5 706 192 77 0 0 chr15 15889413 15889439 -87605535 + (AACTG)n Simple_repeat Simple_repeat 5 30 0 5 706 1043 250 121 105 chr15 15889439 15889691 -87605283 - RMER6D LTR ERVK -374 346 6 5 706 323 194 28 22 chr15 15889978 15890157 -87604817 + (TA)n Simple_repeat Simple_repeat 1 180 0 5 706 30 45 0 0 chr15 15890448 15890492 -87604482 + AT_rich Low_complexity Low_complexity 1 44 0 5 706 327 96 0 0 chr15 15890751 15890803 -87604171 + (CATAT)n Simple_repeat Simple_repeat 3 54 0 5 706 490 262 0 33 chr15 15890806 15890956 -87604018 + Lx7 LINE L1 7552 7696 0 5 706 1128 81 17 6 chr15 15891026 15891200 -87603774 + (GAAA)n Simple_repeat Simple_repeat 2 177 0 5 706 4376 111 46 21 chr15 15891256 15891975 -87602999 - Lx3A LINE L1 -459 6522 5786 5 706 2574 103 72 8 chr15 15891975 15892366 -87602608 + Lx3A LINE L1 6550 6968 -13 5 706 794 11 11 0 chr15 15892366 15892461 -87602513 + (GAAA)n Simple_repeat Simple_repeat 2 97 0 5 706 225 0 0 0 chr15 15892642 15892667 -87602307 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 706 489 34 0 0 chr15 15892673 15892732 -87602242 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 5 706 210 403 0 0 chr15 15892803 15892870 -87602104 + ID4_ SINE ID 12 78 -5 5 706 1073 204 33 84 chr15 15894520 15894755 -87600219 - RMER6C LTR ERVK 0 690 467 5 706 869 110 0 7 chr15 15894755 15894892 -87600082 + (TTTC)n Simple_repeat Simple_repeat 2 137 0 5 706 4159 156 17 23 chr15 15894894 15895663 -87599311 - Lx2 LINE L1 -8 6989 6226 5 706 1073 204 33 84 chr15 15895663 15895723 -87599251 - RMER6C LTR ERVK -224 466 407 5 706 202 160 40 0 chr15 15895733 15895783 -87599191 + (CACTG)n Simple_repeat Simple_repeat 1 52 0 5 706 671 148 0 36 chr15 15895804 15895916 -87599058 - RMER6C LTR ERVK -607 113 6 5 706 539 291 62 24 chr15 15896026 15896234 -87598740 - Lx6 LINE L1 -4 7456 7241 5 706 2894 259 52 20 chr15 15896209 15897285 -87597689 + RMER1A Other Other 1 808 -222 5 706 387 0 0 0 chr15 15898513 15898556 -87596418 + (T)n Simple_repeat Simple_repeat 1 43 0 5 706 340 179 0 0 chr15 15898638 15898694 -87596280 + RMER1A Other Other 802 857 -173 5 706 516 32 0 0 chr15 15898696 15898758 -87596216 + (TC)n Simple_repeat Simple_repeat 1 62 0 5 706 502 227 45 0 chr15 15898769 15898879 -87596095 - Lx6 LINE L1 -581 6879 6765 5 706 24 77 0 0 chr15 15900117 15900169 -87594805 + AT_rich Low_complexity Low_complexity 1 52 0 5 706 1903 120 3 75 chr15 15900265 15900598 -87594376 + RLTR27 LTR ERVK 1 309 0 5 706 25 0 0 0 chr15 15901231 15901256 -87593718 + AT_rich Low_complexity Low_complexity 1 25 0 5 706 264 282 65 78 chr15 15901551 15901606 -87593368 - MER21B LTR ERV1 -286 577 528 5 706 2247 101 169 19 chr15 15901606 15902019 -87592955 - IAPLTR2_Mm LTR ERVK 0 475 1 5 706 264 282 65 78 chr15 15902019 15902117 -87592857 - MER21B LTR ERV1 -336 527 426 5 706 2535 78 27 0 chr15 15902407 15902742 -87592232 - ORR1A1 LTR MaLR 0 346 3 5 706 29 28 0 0 chr15 15903870 15903906 -87591068 + AT_rich Low_complexity Low_complexity 1 36 0 5 706 193 163 41 0 chr15 15904103 15904152 -87590822 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 5 706 642 102 8 16 chr15 15904387 15904516 -87590458 + (CTA)n Simple_repeat Simple_repeat 1 128 0 5 706 187 87 21 42 chr15 15905374 15905422 -87589552 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 5 706 205 267 26 13 chr15 15905525 15905601 -87589373 + (TA)n Simple_repeat Simple_repeat 1 77 0 5 706 409 355 0 43 chr15 15905897 15906106 -87588868 + Lx9 LINE L1 7178 7377 -267 5 706 232 284 15 15 chr15 15906167 15906235 -87588739 - ID_B1 SINE B4 -6 218 151 5 706 194 289 54 63 chr15 15907129 15907240 -87587734 - MIRb SINE MIR -66 202 93 5 706 180 0 0 0 chr15 15907469 15907489 -87587485 + (A)n Simple_repeat Simple_repeat 1 20 0 5 706 2098 318 48 41 chr15 15907556 15909068 -87585906 + Lx9 LINE L1 5377 7083 -561 5 706 25 51 0 0 chr15 15909079 15909118 -87585856 + AT_rich Low_complexity Low_complexity 1 39 0 5 706 25 0 0 0 chr15 15909186 15909211 -87585763 + AT_rich Low_complexity Low_complexity 1 25 0 6 706 379 329 25 19 chr15 15911619 15911777 -87583197 + Lx9 LINE L1 7104 7262 -382 5 706 477 0 0 0 chr15 15912302 15912355 -87582619 + (TA)n Simple_repeat Simple_repeat 1 53 0 6 706 216 0 0 0 chr15 15912559 15912583 -87582391 + (A)n Simple_repeat Simple_repeat 1 24 0 6 706 612 75 0 58 chr15 15912584 15912740 -87582234 + (CAAAC)n Simple_repeat Simple_repeat 3 149 0 6 706 1192 123 20 0 chr15 15913512 15913707 -87581267 - MusHAL1 LINE L1 -2243 469 271 6 706 1416 177 7 14 chr15 15913707 15913988 -87580986 + Lx2B LINE L1 6722 7000 0 6 706 378 219 121 62 chr15 15914431 15914558 -87580416 - ORR1C1 LTR MaLR 0 378 200 6 706 21 71 0 0 chr15 15914782 15914824 -87580150 + AT_rich Low_complexity Low_complexity 1 42 0 6 706 872 267 39 16 chr15 15915484 15915739 -87579235 + RLTR18B LTR ERVK 1 261 -251 6 706 973 238 46 78 chr15 15915758 15916041 -87578933 + RLTR18B LTR ERVK 238 511 -1 6 706 1629 249 83 66 chr15 15916047 15916639 -87578335 - RMER19C LTR ERVK 0 611 10 6 706 756 201 43 27 chr15 15917360 15917616 -87577358 + RMER17C LTR ERVK 15 274 -136 6 706 27 81 0 29 chr15 15917722 15917824 -87577150 + AT_rich Low_complexity Low_complexity 1 99 0 6 706 21 36 0 0 chr15 15918449 15918477 -87576497 + AT_rich Low_complexity Low_complexity 1 28 0 6 706 225 0 0 0 chr15 15918786 15918811 -87576163 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 706 441 0 0 0 chr15 15918908 15918957 -87576017 + (GA)n Simple_repeat Simple_repeat 2 50 0 6 706 845 231 74 3 chr15 15919412 15919634 -87575340 - Lx5 LINE L1 0 7058 6839 6 706 1134 68 7 7 chr15 15920140 15920287 -87574687 + B1_Mm SINE Alu 1 147 0 6 706 222 45 22 43 chr15 15920287 15920333 -87574641 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 6 706 1333 161 70 0 chr15 15920500 15920742 -87574232 - Lx3B LINE L1 -8 6965 6707 6 706 4144 193 0 14 chr15 15920784 15921016 -87573958 + Lx2A LINE L1 5098 5323 -563 6 706 3740 55 6 0 chr15 15921016 15921488 -87573486 - L1Md_F2 LINE L1 -2 6580 6106 6 706 4144 147 19 5 chr15 15921488 15922286 -87572688 + Lx2A LINE L1 5324 6129 -879 6 706 273 250 0 121 chr15 15922424 15922515 -87572459 - MT2B LTR ERVL -374 227 148 6 706 303 263 52 13 chr15 15922501 15922578 -87572396 - B1_Mur1 SINE Alu -32 117 38 6 706 402 244 0 13 chr15 15922512 15922591 -87572383 - MT2B LTR ERVL -342 259 182 6 706 431 177 156 0 chr15 15922576 15922672 -87572302 - RMER6C LTR ERVK -579 111 1 6 706 2070 261 46 77 chr15 15922819 15923555 -87571419 - Lx6 LINE L1 -646 6814 6102 6 706 736 330 66 35 chr15 15923830 15924283 -87570691 - Lx8 LINE L1 -614 6859 6393 6 706 312 75 0 0 chr15 15924426 15924466 -87570508 - ORR1A3 LTR MaLR -2 324 285 6 706 1989 152 3 3 chr15 15924466 15924777 -87570197 + RLTR10E LTR ERVK 1 311 0 6 706 1798 118 113 122 chr15 15924777 15925203 -87569771 + MMERVK10C-int LTR ERVK 1 422 -7159 6 706 809 124 0 0 chr15 15925304 15925425 -87569549 + MMERVK10C-int LTR ERVK 441 561 -7020 6 706 1064 102 12 29 chr15 15925408 15925579 -87569395 + MMERVK10C-int LTR ERVK 668 835 -6746 6 706 1217 190 169 14 chr15 15925592 15926006 -87568968 + RMER16-int LTR ERVK 192 661 -5476 6 706 267 186 0 0 chr15 15926002 15926045 -87568929 + RMER16-int LTR ERVK 950 992 -995 6 706 500 313 21 21 chr15 15926185 15926465 -87568509 + IAPEY3-int LTR ERVK 822 1063 -5479 6 706 359 143 0 0 chr15 15926483 15926539 -87568435 + IAP-d-int LTR ERVK 448 503 -6039 6 706 1452 112 112 0 chr15 15926539 15926763 -87568211 + IAP-d-int LTR ERVK 5007 5255 -1287 6 706 4076 125 8 9 chr15 15926763 15927455 -87567519 + IAPEY3-int LTR ERVK 6965 7680 0 6 706 829 173 7 7 chr15 15927455 15927595 -87567379 + RLTR10E LTR ERVK 1 140 -171 6 706 1974 36 120 0 chr15 15927590 15927866 -87567108 - ORR1A1 LTR MaLR -36 310 2 6 706 189 147 0 0 chr15 15927866 15927900 -87567074 + (CATATA)n Simple_repeat Simple_repeat 3 36 0 6 706 943 152 6 6 chr15 15927901 15928080 -87566894 + (TA)n Simple_repeat Simple_repeat 1 179 0 6 706 189 0 0 0 chr15 15928091 15928112 -87566862 + (GA)n Simple_repeat Simple_repeat 2 22 0 6 706 438 330 110 13 chr15 15928159 15928395 -87566579 + Lx8 LINE L1 7067 7325 -148 6 706 272 193 33 92 chr15 15928434 15928554 -87566420 + Lx9 LINE L1 7529 7641 -3 6 706 378 91 0 0 chr15 15928777 15928832 -87566142 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 706 281 350 50 14 chr15 15928980 15929119 -87565855 + B1F SINE Alu 6 149 0 6 706 336 102 0 0 chr15 15929119 15929168 -87565806 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 6 706 283 190 34 62 chr15 15929233 15929379 -87565595 + (TTATA)n Simple_repeat Simple_repeat 1 142 0 6 706 29 0 0 0 chr15 15929480 15929509 -87565465 + AT_rich Low_complexity Low_complexity 1 29 0 6 706 46 83 0 0 chr15 15930650 15930759 -87564215 + AT_rich Low_complexity Low_complexity 1 109 0 6 706 24 32 0 0 chr15 15931308 15931339 -87563635 + AT_rich Low_complexity Low_complexity 1 31 0 6 706 195 42 0 0 chr15 15931566 15931590 -87563384 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 6 706 5069 118 37 1 chr15 15931599 15932378 -87562596 - Lx3_Mus LINE L1 -44 6965 6159 6 706 4565 100 53 9 chr15 15932379 15933326 -87561648 + Lx3_Mus LINE L1 5175 6166 -843 6 706 25 31 0 0 chr15 15933638 15933670 -87561304 + AT_rich Low_complexity Low_complexity 1 32 0 6 706 2316 292 97 23 chr15 15933696 15934170 -87560804 - Lx6 LINE L1 0 7460 6980 6 706 916 167 53 6 chr15 15934170 15934339 -87560635 - B2_Mm2 SINE B2 -18 177 1 6 706 2316 292 97 23 chr15 15934339 15934737 -87560237 - Lx6 LINE L1 -481 6979 6523 6 706 405 72 0 54 chr15 15934805 15934879 -87560095 - L1Md_F2 LINE L1 0 6582 6513 6 706 1827 112 0 68 chr15 15935187 15935483 -87559491 - ORR1A2 LTR MaLR -51 276 1 6 706 7164 202 106 6 chr15 15935483 15935763 -87559211 - ORR1A2-int LTR MaLR 0 1792 1507 6 706 3537 50 2 7 chr15 15935763 15936210 -87558764 - L1Md_F2 LINE L1 -1 6581 6137 6 706 7164 202 106 6 chr15 15936210 15937559 -87557415 - ORR1A2-int LTR MaLR -286 1506 2 6 706 381 43 0 0 chr15 15937563 15937610 -87557364 - ORR1A2 LTR MaLR -8 338 292 6 706 5901 122 53 2 chr15 15937610 15937726 -87557248 - Lx LINE L1 -2 6652 6537 6 706 219 69 0 0 chr15 15937726 15937755 -87557219 + (CCCA)n Simple_repeat Simple_repeat 1 29 0 6 706 5901 122 53 2 chr15 15937755 15938567 -87556407 - Lx LINE L1 -118 6536 5678 6 706 1209 130 0 11 chr15 15938567 15938787 -87556187 - ORR1A2 LTR MaLR -19 327 104 6 706 225 0 0 0 chr15 15938834 15938859 -87556115 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 706 25 51 0 0 chr15 15938886 15938925 -87556049 + AT_rich Low_complexity Low_complexity 1 39 0 6 706 243 272 21 11 chr15 15938928 15939021 -87555953 - L1MB8 LINE L1 -38 6140 6047 6 706 1174 250 24 24 chr15 15939070 15939410 -87555564 + L1_Mur3 LINE L1 4863 5202 -678 6 706 933 258 23 0 chr15 15939406 15939623 -87555351 + Lx6 LINE L1 6429 6650 -810 6 706 279 122 0 0 chr15 15939690 15939739 -87555235 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 706 23 78 0 0 chr15 15939871 15939922 -87555052 + AT_rich Low_complexity Low_complexity 1 51 0 6 706 507 94 0 202 chr15 15941972 15942109 -87552865 - B1_Mm SINE Alu 0 149 38 6 706 1139 287 67 12 chr15 15942239 15942584 -87552390 + MTD LTR MaLR 3 366 -53 6 706 516 336 75 51 chr15 15942590 15942681 -87552293 - MTE2a LTR MaLR -77 302 218 6 706 2677 88 67 3 chr15 15942681 15943057 -87551917 - MTB LTR MaLR 0 400 1 6 706 516 336 75 51 chr15 15943057 15943260 -87551714 - MTE2a LTR MaLR -162 217 1 6 706 2057 232 79 92 chr15 15943338 15943970 -87551004 + RMER20B LTR ERVK 4 627 0 6 706 220 432 25 17 chr15 15944187 15944307 -87550667 + ID_B1 SINE B4 92 212 -12 6 706 2489 232 20 63 chr15 15944341 15944979 -87549995 + RMER19C LTR ERVK 1 611 0 6 706 839 178 6 0 chr15 15945370 15945544 -87549430 + GA-rich Low_complexity Low_complexity 2 176 0 6 706 1385 192 130 32 chr15 15945740 15945968 -87549006 + Lx6 LINE L1 6321 6559 -901 6 706 3390 180 29 37 chr15 15945968 15946730 -87548244 + RMER6A LTR ERVK 1 756 0 6 706 1385 192 130 32 chr15 15946730 15946840 -87548134 + Lx6 LINE L1 6560 6691 -769 6 706 1951 150 37 6 chr15 15946853 15947208 -87547766 - L1_Mur2 LINE L1 -1656 4221 3856 6 706 251 28 28 0 chr15 15947208 15947244 -87547730 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 6 706 4806 148 87 6 chr15 15947265 15948648 -87546326 + Lx LINE L1 5039 6536 -118 6 706 652 344 63 22 chr15 15948642 15948960 -87546014 - Lx8 LINE L1 -806 6667 6337 6 706 445 355 76 43 chr15 15949017 15949346 -87545628 + L1MC1 LINE L1 5895 6234 -99 6 706 40 97 0 0 chr15 15949477 15949601 -87545373 + AT_rich Low_complexity Low_complexity 1 124 0 6 706 515 347 62 22 chr15 15950086 15950410 -87544564 + Lx9 LINE L1 7081 7417 -227 6 706 26 50 0 0 chr15 15950552 15950592 -87544382 + AT_rich Low_complexity Low_complexity 1 40 0 6 706 1106 283 42 89 chr15 15951791 15951886 -87543088 - RLTR28B LTR ERVL 0 481 390 6 706 3267 67 25 7 chr15 15951886 15952324 -87542650 - L1Md_F2 LINE L1 -1 6581 6136 6 706 1106 283 42 89 chr15 15952324 15952709 -87542265 - RLTR28B LTR ERVL -92 389 26 6 706 207 0 0 0 chr15 15953011 15953034 -87541940 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 706 841 122 13 0 chr15 15953034 15953190 -87541784 + (GA)n Simple_repeat Simple_repeat 2 159 0 6 706 963 309 52 11 chr15 15953450 15953797 -87541177 + Lx9 LINE L1 7052 7412 -232 6 706 342 0 0 0 chr15 15953848 15953886 -87541088 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 706 195 100 0 0 chr15 15953886 15953915 -87541059 + (CG)n Simple_repeat Simple_repeat 2 31 0 6 706 265 277 20 0 chr15 15953925 15954026 -87540948 + Lx9 LINE L1 7517 7619 -25 6 706 228 67 0 0 chr15 15954064 15954094 -87540880 + (TA)n Simple_repeat Simple_repeat 2 31 0 6 706 438 139 0 0 chr15 15954450 15954522 -87540452 + (TA)n Simple_repeat Simple_repeat 2 73 0 6 706 348 64 0 0 chr15 15954594 15954641 -87540333 + (TA)n Simple_repeat Simple_repeat 2 48 0 6 706 1514 184 11 18 chr15 15955653 15955935 -87539039 - RLTR10E LTR ERVK 0 311 32 6 706 22 35 0 0 chr15 15956040 15956069 -87538905 + AT_rich Low_complexity Low_complexity 1 29 0 6 706 21 0 0 0 chr15 15956198 15956219 -87538755 + AT_rich Low_complexity Low_complexity 1 21 0 6 706 216 0 0 0 chr15 15956715 15956739 -87538235 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 706 309 26 0 0 chr15 15956739 15956776 -87538198 + (GA)n Simple_repeat Simple_repeat 1 38 0 6 706 403 332 107 50 chr15 15958944 15959242 -87535732 + MLT1D LTR MaLR 191 505 0 6 706 274 366 47 44 chr15 15959473 15959747 -87535227 - LTR83 LTR ERVL -485 295 21 6 706 30 27 0 0 chr15 15960178 15960215 -87534759 + AT_rich Low_complexity Low_complexity 1 37 0 6 706 3404 275 89 7 chr15 15960569 15961648 -87533326 - Lx5 LINE L1 -3 7047 5880 6 706 1354 212 64 3 chr15 15961660 15961987 -87532987 + L1_Mur2 LINE L1 3379 3725 -2152 6 706 340 346 7 22 chr15 15962015 15962151 -87532823 + ID_B1 SINE B4 91 224 0 7 706 3331 83 9 0 chr15 15963168 15963623 -87531351 - L1_Mus2 LINE L1 -1 6565 6107 7 706 334 325 16 24 chr15 15964012 15964135 -87530839 + MIRb SINE MIR 13 134 -134 7 706 240 160 120 0 chr15 15964419 15964494 -87530480 + Lx9 LINE L1 7425 7508 -136 7 706 293 159 16 0 chr15 15964494 15964557 -87530417 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 7 706 372 43 0 0 chr15 15964640 15964686 -87530288 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 7 706 253 100 20 20 chr15 15964831 15964882 -87530092 + (CATA)n Simple_repeat Simple_repeat 1 51 0 7 706 562 246 14 50 chr15 15965022 15965163 -87529811 - B1_Mur2 SINE Alu -1 148 13 7 706 1775 121 7 3 chr15 15965394 15965676 -87529298 + L1_Mus4 LINE L1 6350 6632 -4 7 706 230 329 27 0 chr15 15965703 15965776 -87529198 + Lx9 LINE L1 6383 6457 -1187 7 706 2303 248 67 18 chr15 15965765 15966392 -87528582 - Lx2B LINE L1 -302 6698 6041 7 706 422 286 147 5 chr15 15966391 15966604 -87528370 + Lx2B LINE L1 6716 7050 -8 7 706 1425 315 72 36 chr15 15966688 15967323 -87527651 + Lx7 LINE L1 6179 6836 -860 7 706 3557 97 39 0 chr15 15967323 15967840 -87527134 - L1_Mus3 LINE L1 -507 6131 5595 7 706 5194 132 4 1 chr15 15967841 15968652 -87526322 + L1_Mm LINE L1 4228 5040 -843 7 706 265 367 27 54 chr15 15969043 15969190 -87525784 - MTEa LTR MaLR -233 146 4 7 706 336 24 0 0 chr15 15969231 15969272 -87525702 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 7 706 462 49 0 0 chr15 15969273 15969334 -87525640 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 706 1654 204 0 3 chr15 15969437 15969762 -87525212 - L1_Mur1 LINE L1 -688 5198 4875 7 706 6273 133 19 16 chr15 15969761 15971178 -87523796 + L1_Mus3 LINE L1 5205 6624 -14 7 706 186 43 0 0 chr15 15971183 15971206 -87523768 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 7 706 1560 115 4 0 chr15 15971209 15971452 -87523522 + Lx3_Mus LINE L1 6766 7009 0 7 706 513 0 0 0 chr15 15973786 15973843 -87521131 + (CA)n Simple_repeat Simple_repeat 2 58 0 7 706 532 372 65 11 chr15 15974732 15975117 -87519857 + L2b LINE L2 2833 3242 -133 7 706 22 0 0 0 chr15 15975264 15975286 -87519688 + AT_rich Low_complexity Low_complexity 1 22 0 7 706 211 288 30 0 chr15 15975367 15975433 -87519541 + (CATG)n Simple_repeat Simple_repeat 3 70 0 7 706 471 78 0 0 chr15 15975645 15975709 -87519265 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 706 211 67 43 22 chr15 15975929 15975975 -87518999 + (CAAAAA)n Simple_repeat Simple_repeat 3 49 0 7 706 262 138 35 0 chr15 15976666 15976724 -87518250 + (TA)n Simple_repeat Simple_repeat 2 61 0 7 706 30 89 0 0 chr15 15976792 15976871 -87518103 + AT_rich Low_complexity Low_complexity 1 79 0 7 706 376 342 110 51 chr15 15977431 15977884 -87517090 - MLT1D LTR MaLR -20 485 6 7 706 3196 97 4 0 chr15 15978988 15979442 -87515532 + L1_Mus3 LINE L1 6183 6638 0 7 706 10561 61 2 0 chr15 15979737 15981096 -87513878 + L1Md_F3 LINE L1 4225 5586 -297 7 706 8269 32 4 1 chr15 15981096 15982090 -87512884 + L1Md_F3 LINE L1 5587 6583 -1 7 706 228 320 51 31 chr15 15983348 15983460 -87511514 + PB1D7 SINE Alu 6 119 -1 7 706 1892 130 37 73 chr15 15983531 15983912 -87511062 - Lx LINE L1 -1 6653 6287 7 706 1169 282 147 36 chr15 15983970 15984466 -87510508 - RMER15 LTR ERVL -24 551 1 7 706 614 136 32 0 chr15 15984611 15984765 -87510209 + (TAGA)n Simple_repeat Simple_repeat 4 162 0 7 706 26 0 0 0 chr15 15986300 15986326 -87508648 + AT_rich Low_complexity Low_complexity 1 26 0 7 706 266 115 19 0 chr15 15986529 15986581 -87508393 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 7 706 1122 81 0 0 chr15 15986596 15986744 -87508230 - B1_Mus1 SINE Alu 0 148 1 7 706 1882 74 73 4 chr15 15986795 15987067 -87507907 + L1_Mus1 LINE L1 6275 6565 -2 7 706 1013 93 0 0 chr15 15987236 15987376 -87507598 + B1_Mus1 SINE Alu 8 147 -1 7 706 293 68 0 22 chr15 15987376 15987421 -87507553 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 7 706 211 214 29 0 chr15 15987808 15987878 -87507096 + GA-rich Low_complexity Low_complexity 1 72 0 7 706 336 311 32 40 chr15 15988494 15988742 -87506232 + L1MDa LINE L1 1729 1974 -4659 7 706 263 256 121 11 chr15 15989116 15989207 -87505767 + L1MD3 LINE L1 7434 7534 -461 7 706 414 369 37 71 chr15 15989504 15989799 -87505175 + B4A SINE B4 2 286 -6 7 707 306 256 24 24 chr15 15991293 15991377 -87503597 - ORR1E LTR MaLR -166 193 110 7 707 451 216 147 0 chr15 15992203 15992319 -87502655 - B1_Mur4 SINE Alu -7 143 11 7 707 28 29 0 0 chr15 15992766 15992801 -87502173 + AT_rich Low_complexity Low_complexity 1 35 0 7 707 655 257 32 27 chr15 15992893 15993056 -87501918 - B1_Mus2 SINE Alu -1 310 14 7 707 29 89 0 18 chr15 15993795 15993891 -87501083 + AT_rich Low_complexity Low_complexity 1 96 0 7 707 1031 51 73 0 chr15 15993891 15994028 -87500946 - B1_Mm SINE Alu 0 147 1 7 707 29 89 0 18 chr15 15994028 15994045 -87500929 + AT_rich Low_complexity Low_complexity 1 16 0 7 707 346 123 27 27 chr15 15994621 15994696 -87500278 + (CATATA)n Simple_repeat Simple_repeat 4 78 0 7 707 414 256 109 58 chr15 15994978 15995115 -87499859 + B1_Mur1 SINE Alu 6 149 0 7 707 7984 153 22 7 chr15 15996348 15997893 -87497081 + Lx2 LINE L1 5409 6985 -12 7 707 23 0 0 0 chr15 15997931 15997954 -87497020 + AT_rich Low_complexity Low_complexity 1 23 0 7 707 284 51 68 0 chr15 15997957 15998016 -87496958 + (TA)n Simple_repeat Simple_repeat 2 64 0 7 707 21 36 0 0 chr15 15998207 15998235 -87496739 + AT_rich Low_complexity Low_complexity 1 28 0 7 707 237 65 0 0 chr15 15998947 15998978 -87495996 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 707 309 51 0 0 chr15 15998978 15999017 -87495957 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 707 338 354 76 30 chr15 15999057 15999255 -87495719 + B3 SINE B2 10 216 0 7 707 244 311 17 28 chr15 16000551 16000677 -87494297 + MLT2B4 LTR ERVL 1 120 -395 1 707 548 218 9 0 chr15 16001105 16001215 -87493759 - B1_Mus1 SINE Alu 0 148 38 2 707 21 71 0 0 chr15 16001253 16001295 -87493679 + AT_rich Low_complexity Low_complexity 1 42 0 3 707 5837 47 0 7 chr15 16002519 16003252 -87491722 + L1Md_F2 LINE L1 5855 6582 0 4 707 211 0 0 81 chr15 16003826 16003863 -87491111 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 5 707 621 219 0 8 chr15 16004012 16004136 -87490838 - MTE2b LTR MaLR -256 123 1 6 707 21 36 0 0 chr15 16004184 16004212 -87490762 + AT_rich Low_complexity Low_complexity 1 28 0 7 707 216 200 0 0 chr15 16004776 16004821 -87490153 + (CATATA)n Simple_repeat Simple_repeat 5 49 0 8 707 35 110 0 0 chr15 16004823 16004977 -87489997 + AT_rich Low_complexity Low_complexity 1 154 0 9 707 1369 6 0 0 chr15 16005171 16005331 -87489643 + L1Md_A LINE L1 6423 6582 0 1 707 435 19 0 0 chr15 16005475 16005527 -87489447 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 1 707 432 0 0 0 chr15 16005625 16005673 -87489301 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 707 1320 159 80 0 chr15 16005700 16005939 -87489035 - Lx LINE L1 0 6654 6397 1 707 1508 197 6 9 chr15 16006679 16007012 -87487962 - Lx2 LINE L1 -4 6993 6662 1 707 23 33 0 0 chr15 16007514 16007544 -87487430 + AT_rich Low_complexity Low_complexity 1 30 0 1 707 212 296 37 0 chr15 16007621 16007675 -87487299 + RSINE1 SINE B4 15 70 -95 1 707 1095 69 0 0 chr15 16007680 16007825 -87487149 + (TTCC)n Simple_repeat Simple_repeat 2 146 0 1 707 909 153 0 0 chr15 16007843 16007987 -87486987 - B1_Mus1 SINE Alu 0 148 5 1 707 459 52 0 0 chr15 16009433 16009491 -87485483 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 707 23 78 0 0 chr15 16009518 16009569 -87485405 + AT_rich Low_complexity Low_complexity 1 51 0 2 707 299 340 73 81 chr15 16009645 16009879 -87485095 - ORR1E LTR MaLR -120 239 8 2 707 248 222 0 31 chr15 16010067 16010132 -87484842 + GA-rich Low_complexity Low_complexity 1 63 0 2 707 1235 222 147 42 chr15 16010140 16010493 -87484481 - RMER10B LTR ERVL 0 398 9 2 707 483 130 0 0 chr15 16010507 16010584 -87484390 + (A)n Simple_repeat Simple_repeat 1 77 0 2 707 226 310 0 0 chr15 16010921 16010992 -87483982 - Lx9 LINE L1 -757 6887 6817 2 707 1263 239 57 3 chr15 16010994 16011292 -87483682 - MTC LTR MaLR -2 419 106 2 707 11397 23 0 0 chr15 16011881 16013211 -87481763 + L1Md_T LINE L1 4257 5586 -297 2 707 8585 23 0 0 chr15 16013211 16014279 -87480695 + L1Md_T LINE L1 5587 6582 0 2 707 233 217 0 0 chr15 16014279 16014325 -87480649 - MTC LTR MaLR -299 120 75 2 707 1729 72 0 0 chr15 16014366 16014589 -87480385 + Lx LINE L1 6177 6399 -255 2 707 258 32 0 0 chr15 16014589 16014620 -87480354 + (A)n Simple_repeat Simple_repeat 1 31 0 2 707 2266 279 26 12 chr15 16014708 16015389 -87479585 + Lx7 LINE L1 6419 7109 -587 3 707 1622 170 24 3 chr15 16016024 16016301 -87478673 - L1_Mur2 LINE L1 -2128 3749 3465 3 707 5189 113 38 2 chr15 16016301 16017090 -87477884 - L1_Mus4 LINE L1 -1 6635 5819 3 707 1622 170 24 3 chr15 16017090 16017148 -87477826 - L1_Mur2 LINE L1 -2413 3464 3407 3 707 2315 38 7 0 chr15 16017145 16017438 -87477536 - L1Md_F3 LINE L1 -520 6064 5770 3 707 3909 34 11 2 chr15 16017435 16017905 -87477069 + L1Md_F3 LINE L1 6079 6552 -32 3 707 456 0 47 0 chr15 16017905 16017969 -87477005 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 707 1930 155 11 0 chr15 16017974 16018341 -87476633 - L1_Mur2 LINE L1 -2461 3416 3046 3 707 540 176 8 15 chr15 16018341 16018474 -87476500 + CT-rich Low_complexity Low_complexity 1 132 0 3 707 1620 31 0 0 chr15 16018474 16018765 -87476209 + (TTCTCC)n Simple_repeat Simple_repeat 1 291 0 3 707 241 224 14 56 chr15 16018772 16018843 -87476131 - L1_Mur2 LINE L1 -2826 3051 2984 3 707 1996 199 14 23 chr15 16018848 16019280 -87475694 + Lx5 LINE L1 3729 4156 -1721 3 707 189 0 0 0 chr15 16019377 16019398 -87475576 + (A)n Simple_repeat Simple_repeat 1 21 0 3 707 5500 207 50 27 chr15 16019398 16020904 -87474070 + Lx5 LINE L1 5393 6929 -121 3 707 577 180 71 165 chr15 16020966 16021297 -87473677 + RLTRETN_Mm LTR ERVK 1 402 -7 3 707 278 333 23 23 chr15 16022546 16022721 -87472253 - L1M5 LINE L1 -608 5836 5662 4 707 33 107 0 0 chr15 16024538 16024669 -87470305 + AT_rich Low_complexity Low_complexity 1 131 0 4 707 6753 116 42 1 chr15 16024835 16025856 -87469118 - Lx3_Mus LINE L1 0 7009 5947 4 707 6561 87 1 3 chr15 16025869 16026766 -87468208 + L1_Mur1 LINE L1 4833 5727 -159 4 707 329 240 0 0 chr15 16027685 16027760 -87467214 - Lx6 LINE L1 -993 6467 6393 4 707 465 121 0 0 chr15 16027891 16027974 -87467000 + (TG)n Simple_repeat Simple_repeat 2 84 0 4 707 3073 224 244 16 chr15 16027979 16029251 -87465723 - L1_Mur3 LINE L1 -1731 4149 2588 4 707 379 311 43 71 chr15 16029908 16030119 -87464855 + Lx8 LINE L1 5505 5709 -138 4 707 264 30 0 0 chr15 16030119 16030152 -87464822 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 707 189 0 0 0 chr15 16030152 16030173 -87464801 + (GA)n Simple_repeat Simple_repeat 2 22 0 4 707 3391 145 0 0 chr15 16030265 16030783 -87464191 + Lx LINE L1 5912 6429 -225 5 707 2355 19 0 4 chr15 16030828 16031099 -87463875 + L1Md_T LINE L1 5317 5586 -297 5 707 8135 46 0 0 chr15 16031099 16032094 -87462880 + L1Md_T LINE L1 5587 6581 -1 5 707 240 281 0 24 chr15 16032215 16032299 -87462675 - Lx7 LINE L1 -1925 5771 5690 5 707 964 124 0 0 chr15 16032387 16032524 -87462450 + B2_Mm2 SINE B2 1 137 -58 5 707 7610 64 9 8 chr15 16032524 16033586 -87461388 + L1_Mus1 LINE L1 5492 6567 0 5 707 1107 359 91 42 chr15 16033721 16033778 -87461196 + Lx8 LINE L1 6131 6190 -1283 4 707 315 0 0 0 chr15 16033778 16033813 -87461161 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 707 528 16 0 0 chr15 16033813 16033873 -87461101 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 707 1107 359 91 42 chr15 16033873 16034875 -87460099 + Lx8 LINE L1 6191 7243 -230 4 707 1704 137 36 0 chr15 16034883 16035161 -87459813 + Lx2 LINE L1 6709 6996 -1 5 707 21 36 0 0 chr15 16035347 16035375 -87459599 + AT_rich Low_complexity Low_complexity 1 28 0 5 707 234 0 0 0 chr15 16037137 16037163 -87457811 + (TAGA)n Simple_repeat Simple_repeat 1 26 0 5 707 243 0 0 0 chr15 16037875 16037902 -87457072 + (TA)n Simple_repeat Simple_repeat 1 27 0 6 707 411 351 0 0 chr15 16038935 16039083 -87455891 + Lx7 LINE L1 7152 7299 -397 6 707 579 15 0 0 chr15 16039831 16039899 -87455075 + (TC)n Simple_repeat Simple_repeat 1 68 0 6 707 289 323 15 8 chr15 16040321 16040452 -87454522 + (CA)n Simple_repeat Simple_repeat 1 132 0 6 707 757 86 188 0 chr15 16040591 16040708 -87454266 + B1_Mus1 SINE Alu 2 140 -8 6 707 225 0 0 0 chr15 16040709 16040734 -87454240 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 6 707 1227 81 11 16 chr15 16040909 16041097 -87453877 - L1Md_F2 LINE L1 -3 6579 6393 6 707 9008 53 3 0 chr15 16041097 16042727 -87452247 + L1Md_F2 LINE L1 4753 6386 -196 6 707 1379 59 9 94 chr15 16042759 16042983 -87451991 - Lx3A LINE L1 -994 5987 5783 6 707 2513 67 0 0 chr15 16042998 16043327 -87451647 - L1Md_F2 LINE L1 -6 6576 6248 6 707 4084 44 12 0 chr15 16043327 16043826 -87451148 + L1_Mm LINE L1 5162 5666 -217 6 707 35047 31 6 60 chr15 16044839 16047214 -87447760 - L1Md_T LINE L1 0 6585 4173 7 707 3331 22 2 2 chr15 16047214 16047625 -87447349 + MT-int LTR MaLR 614 1024 -74 7 707 35047 31 6 60 chr15 16047625 16051496 -87443478 - L1Md_T LINE L1 0 4172 238 7 707 945 126 40 17 chr15 16051506 16051683 -87443291 - B2_Mm2 SINE B2 -5 190 10 7 707 319 294 0 0 chr15 16051607 16051692 -87443282 - RSINE1 SINE B4 -79 86 2 7 707 21 0 0 0 chr15 16052104 16052125 -87442849 + AT_rich Low_complexity Low_complexity 1 21 0 7 707 278 380 28 9 chr15 16052358 16052467 -87442507 + PB1D7 SINE Alu 1 111 -9 7 707 289 246 42 56 chr15 16052522 16052664 -87442310 - L1M5 LINE L1 -667 5777 5638 7 707 4100 223 49 8 chr15 16053416 16054615 -87440359 - Lx5 LINE L1 -6 7044 5749 7 707 6966 173 64 11 chr15 16054615 16055799 -87439175 + L1_Mur2 LINE L1 4187 5442 -435 7 707 225 65 0 0 chr15 16055799 16055830 -87439144 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 707 6966 173 64 11 chr15 16055830 16056120 -87438854 + L1_Mur2 LINE L1 5443 5740 -137 7 707 381 352 89 27 chr15 16056148 16056294 -87438680 + RSINE1 SINE B4 3 157 -8 8 707 30 0 0 0 chr15 16056312 16056342 -87438632 + AT_rich Low_complexity Low_complexity 1 30 0 8 707 308 192 26 0 chr15 16056622 16056700 -87438274 + (CATA)n Simple_repeat Simple_repeat 1 80 0 8 707 22 0 0 0 chr15 16057377 16057399 -87437575 + AT_rich Low_complexity Low_complexity 1 22 0 8 707 35 41 0 0 chr15 16058094 16058143 -87436831 + AT_rich Low_complexity Low_complexity 1 49 0 8 707 21 0 0 0 chr15 16058201 16058222 -87436752 + AT_rich Low_complexity Low_complexity 1 21 0 8 707 337 116 29 0 chr15 16058875 16058944 -87436030 + (TA)n Simple_repeat Simple_repeat 1 71 0 8 707 864 153 7 0 chr15 16058944 16059081 -87435893 + RLTR13D6 LTR ERVK 21 158 -744 8 707 694 216 80 29 chr15 16059101 16059377 -87435597 - Lx LINE L1 -3 6651 6362 8 707 722 84 0 10 chr15 16059435 16059531 -87435443 + L1Md_F2 LINE L1 5491 5585 -298 8 707 8048 44 1 12 chr15 16059532 16060537 -87434437 + L1Md_F2 LINE L1 5587 6580 -2 8 707 3036 175 88 33 chr15 16060541 16061232 -87433742 + RLTR13D6 LTR ERVK 164 892 -10 8 707 5043 90 15 27 chr15 16061281 16062013 -87432961 + Lx3_Mus LINE L1 6287 7009 0 9 707 503 276 58 40 chr15 16062334 16062560 -87432414 - Lx6 LINE L1 -8 7452 7223 9 707 476 301 16 0 chr15 16062598 16062721 -87432253 - Lx6 LINE L1 -412 7048 6924 9 707 2651 209 105 28 chr15 16062792 16062994 -87431980 + L1_Mur3 LINE L1 4639 4852 -1028 9 707 186 43 0 0 chr15 16062994 16063017 -87431957 + (GAAA)n Simple_repeat Simple_repeat 1 23 0 9 707 2651 209 105 28 chr15 16063017 16063576 -87431398 + L1_Mur3 LINE L1 4853 5459 -421 9 707 942 302 46 86 chr15 16063659 16064333 -87430641 - MTC-int LTR MaLR -192 1066 307 9 707 1581 251 136 57 chr15 16065105 16065651 -87429323 - RMER19B LTR ERVK 0 902 314 9 707 539 280 207 48 chr15 16065702 16065835 -87429139 + Lx7 LINE L1 5295 5446 -434 9 707 402 21 0 0 chr15 16065835 16065882 -87429092 + (GA)n Simple_repeat Simple_repeat 2 48 0 9 707 595 275 148 28 chr15 16065882 16066271 -87428703 + Lx7 LINE L1 5447 5907 -1789 9 707 426 383 39 10 chr15 16066305 16066611 -87428363 + Lx7 LINE L1 6606 6920 -776 9 707 3633 112 16 96 chr15 16066687 16066997 -87427977 + L1_Mur1 LINE L1 3037 3279 -2607 9 707 3349 40 0 0 chr15 16066997 16067393 -87427581 + MTA_Mm LTR MaLR 1 396 0 9 707 3633 112 16 96 chr15 16067393 16067421 -87427553 + L1_Mur1 LINE L1 3280 3303 -2583 9 707 405 0 0 0 chr15 16067421 16067466 -87427508 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 707 3633 112 16 96 chr15 16067466 16067894 -87427080 + L1_Mur1 LINE L1 3304 3741 -2145 9 707 543 138 36 9 chr15 16067895 16068005 -87426969 + Lx3_Mus LINE L1 6897 7009 0 1 707 465 110 0 0 chr15 16068174 16068256 -87426718 + (TG)n Simple_repeat Simple_repeat 2 83 0 1 707 422 285 79 132 chr15 16068414 16068570 -87426404 - Lx7 LINE L1 -357 7339 7177 1 707 911 73 0 0 chr15 16068570 16068729 -87426245 - L1_Mus2 LINE L1 0 6566 6435 1 707 422 285 79 132 chr15 16068729 16068874 -87426100 - Lx7 LINE L1 -520 7176 7054 1 707 370 299 186 14 chr15 16069159 16069439 -87425535 - Lx7 LINE L1 -345 7351 7024 1 707 24 0 0 0 chr15 16069783 16069807 -87425167 + AT_rich Low_complexity Low_complexity 1 24 0 1 707 376 72 29 0 chr15 16070368 16070437 -87424537 + (CAAAA)n Simple_repeat Simple_repeat 2 72 0 1 707 5793 201 27 33 chr15 16072174 16072884 -87422090 + Lx2B LINE L1 5651 6381 -619 1 707 5206 162 7 21 chr15 16072884 16073791 -87421183 + Lx2 LINE L1 6103 6996 -1 1 707 5793 226 27 30 chr15 16073791 16074502 -87420472 + Lx2B LINE L1 6382 7000 0 1 707 271 256 111 62 chr15 16075451 16075613 -87419361 - Lx8 LINE L1 0 7473 7304 1 707 402 20 0 0 chr15 16076056 16076083 -87418891 + (T)n Simple_repeat Simple_repeat 1 27 0 1 707 1024 79 50 0 chr15 16076083 16076223 -87418751 - B1_Mus2 SINE Alu 0 147 1 1 707 402 20 0 0 chr15 16076223 16076244 -87418730 + (T)n Simple_repeat Simple_repeat 1 21 0 1 707 591 15 0 0 chr15 16076422 16076490 -87418484 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 707 22 0 0 0 chr15 16076712 16076734 -87418240 + AT_rich Low_complexity Low_complexity 1 22 0 1 707 299 227 81 9 chr15 16078392 16078503 -87416471 + Lx9 LINE L1 7519 7637 -7 1 707 459 345 11 15 chr15 16078826 16079088 -87415886 - L1M2 LINE L1 -643 5657 5397 1 707 525 16 0 0 chr15 16079217 16079279 -87415695 + (TAG)n Simple_repeat Simple_repeat 1 62 0 1 707 261 359 0 32 chr15 16079752 16079847 -87415127 - B3A SINE B2 -104 94 3 1 707 27 0 0 0 chr15 16080009 16080036 -87414938 + AT_rich Low_complexity Low_complexity 1 27 0 1 707 2642 86 47 0 chr15 16080036 16080397 -87414577 - L1_Mus2 LINE L1 -131 6435 6058 1 707 260 49 49 0 chr15 16080748 16080789 -87414185 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 1 707 358 265 128 0 chr15 16080794 16080896 -87414078 + B1_Mus2 SINE Alu 33 147 0 1 707 447 167 219 0 chr15 16081147 16081261 -87413713 + URR1B DNA MER1_type 86 224 -1 1 707 314 58 0 37 chr15 16082871 16082925 -87412049 + (TTTTTG)n Simple_repeat Simple_repeat 3 54 0 1 707 396 0 0 0 chr15 16083085 16083129 -87411845 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 707 392 359 91 7 chr15 16083195 16083349 -87411625 - B4A SINE B4 -23 269 103 1 707 487 318 40 40 chr15 16084105 16084328 -87410646 + Lx8 LINE L1 7017 7239 -234 1 707 229 312 27 27 chr15 16084579 16084691 -87410283 + L1MA6 LINE L1 3449 3560 -2583 1 707 372 330 130 34 chr15 16084724 16085047 -87409927 + L1MA6 LINE L1 3662 4018 -2128 1 707 988 109 11 0 chr15 16085107 16085282 -87409692 + (GAA)n Simple_repeat Simple_repeat 2 178 0 1 707 311 357 37 53 chr15 16085322 16085621 -87409353 + L1MA6 LINE L1 4939 5232 -911 1 707 1070 115 5 21 chr15 16085751 16085937 -87409037 + Lx3_Mus LINE L1 6820 7002 -7 1 707 375 292 84 14 chr15 16086223 16086438 -87408536 + L1MA6 LINE L1 5751 5980 -320 1 707 1382 100 0 0 chr15 16086783 16086973 -87408001 - Lx3_Mus LINE L1 -407 6602 6413 1 707 1773 175 0 7 chr15 16086973 16087278 -87407696 + Lx3A LINE L1 6666 6968 -13 1 707 227 31 31 0 chr15 16087278 16087310 -87407664 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 1 707 381 380 81 21 chr15 16088533 16088767 -87406207 + MLT1E3 LTR MaLR 309 556 -68 1 707 1804 249 87 45 chr15 16090160 16090677 -87404297 - RLTR20A LTR ERVK -2 539 1 1 707 492 65 13 0 chr15 16090793 16090870 -87404104 - L1_Mus3 LINE L1 -7 6631 6554 1 707 242 57 0 0 chr15 16090870 16090905 -87404069 - MusHAL1 LINE L1 -2730 624 590 1 707 625 299 39 50 chr15 16090902 16091384 -87403590 - L1VL4 LINE L1 -5781 779 319 1 707 2247 70 129 11 chr15 16092305 16092654 -87402320 - RLTR10 LTR ERVK 0 390 1 1 707 870 337 37 43 chr15 16092962 16093337 -87401637 - MTE2b LTR MaLR -1 378 6 1 707 22 35 0 0 chr15 16093473 16093502 -87401472 + AT_rich Low_complexity Low_complexity 1 29 0 1 707 206 180 0 16 chr15 16093545 16093586 -87401388 + CT-rich Low_complexity Low_complexity 22 62 0 1 707 192 40 0 0 chr15 16093586 16093611 -87401363 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 707 206 180 0 16 chr15 16093611 16093631 -87401343 + polypyrimidine Low_complexity Low_complexity 2 21 0 1 707 423 372 101 17 chr15 16094593 16094940 -87400034 - MLT1A1 LTR MaLR -12 396 21 1 707 3506 103 45 7 chr15 16094976 16095514 -87399460 + Lx LINE L1 6090 6647 -7 1 707 609 14 0 0 chr15 16096023 16096093 -87398881 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 1 707 3239 109 0 0 chr15 16096105 16096553 -87398421 - Lx3A LINE L1 -140 6841 6394 1 707 501 17 0 0 chr15 16096553 16096611 -87398363 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 707 326 338 77 58 chr15 16097680 16097887 -87397087 - MLT1A0 LTR MaLR -10 355 145 1 707 8107 56 10 0 chr15 16097913 16099605 -87395369 - L1Md_F2 LINE L1 0 6582 4873 1 707 531 0 0 0 chr15 16099695 16099754 -87395220 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 1 707 8230 137 25 24 chr15 16099754 16100907 -87394067 - Lx3_Mus LINE L1 -19 6990 5833 1 707 2751 44 0 139 chr15 16100907 16101331 -87393643 + RLTR10B2 LTR ERVK 1 365 0 1 707 8230 117 2 70 chr15 16101331 16101614 -87393360 - Lx3_Mus LINE L1 -51 5835 5573 1 707 904 148 12 6 chr15 16101614 16101784 -87393190 - L1_Mus4 LINE L1 -6 6630 6460 1 707 2457 117 2 70 chr15 16101784 16101870 -87393104 - Lx3_Mus LINE L1 -314 5572 5487 1 707 5669 78 1 3 chr15 16101855 16103182 -87391792 - L1Md_Gf LINE L1 -3903 1983 563 1 707 410 176 54 0 chr15 16103175 16103249 -87391725 - L1Md_Gf LINE L1 -6282 337 260 1 707 15742 196 48 44 chr15 16103238 16103749 -87391225 - Lx3_Mus LINE L1 -389 5488 4985 1 707 2814 65 52 0 chr15 16103749 16104118 -87390856 - RLTR10 LTR ERVK -2 388 1 1 707 15742 196 48 44 chr15 16104118 16105029 -87389945 - Lx3_Mus LINE L1 -893 4984 3991 1 707 3275 46 5 0 chr15 16105029 16105423 -87389551 + MTA_Mm LTR MaLR 1 396 0 1 707 8634 50 22 0 chr15 16105423 16106497 -87388477 + MTA_Mm-int LTR MaLR 1 1098 0 1 707 3272 46 5 0 chr15 16106497 16106890 -87388084 + MTA_Mm LTR MaLR 1 396 0 1 707 15742 196 48 44 chr15 16106890 16109341 -87385633 - Lx3_Mus LINE L1 -1887 3990 1602 1 707 4947 154 17 16 chr15 16109955 16110840 -87384134 - RMER17A2 LTR ERVK 0 906 21 1 707 1962 106 11 70 chr15 16111242 16111598 -87383376 + IAPLTR1a_Mm LTR ERVK 1 335 -2 1 707 3387 80 4 44 chr15 16111598 16112445 -87382529 + IAPEz-int LTR ERVK 6 662 -5819 1 707 418 125 0 30 chr15 16112445 16112511 -87382463 + IAPEz-int LTR ERVK 1359 1422 -5059 1 707 1813 119 4 4 chr15 16112497 16112759 -87382215 + IAPEz-int LTR ERVK 2236 2497 -5183 1 707 917 88 24 0 chr15 16112754 16112879 -87382095 + IAPEz-int LTR ERVK 4783 4910 -2770 1 707 25641 22 6 0 chr15 16112879 16115818 -87379156 + IAPEz-int LTR ERVK 3525 6481 0 1 707 1967 103 11 70 chr15 16115818 16116174 -87378800 + IAPLTR1a_Mm LTR ERVK 1 335 -2 1 707 293 115 25 25 chr15 16116991 16117071 -87377903 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 707 207 0 0 0 chr15 16117621 16117644 -87377330 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1 707 1078 90 0 0 chr15 16117648 16117793 -87377181 - B1_Mus1 SINE Alu -1 147 3 1 707 2043 268 68 18 chr15 16118930 16119611 -87375363 + Lx9 LINE L1 6922 7636 -8 1 707 465 66 0 0 chr15 16119999 16120060 -87374914 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 707 372 178 0 0 chr15 16120895 16120968 -87374006 + T-rich Low_complexity Low_complexity 1 73 0 1 707 21 36 0 0 chr15 16121207 16121235 -87373739 + AT_rich Low_complexity Low_complexity 1 28 0 1 88 2322 202 57 31 chr15 16121472 16122018 -87372956 - RLTR20B2 LTR ERVK 0 560 1 1 708 338 278 10 0 chr15 16122077 16122174 -87372800 - PB1D9 SINE Alu -1 119 22 1 708 21 0 0 0 chr15 16122645 16122666 -87372308 + AT_rich Low_complexity Low_complexity 1 21 0 1 708 345 86 41 49 chr15 16122722 16122845 -87372129 + T-rich Low_complexity Low_complexity 3 124 0 1 708 969 47 8 0 chr15 16122847 16122976 -87371998 - B1_Mus1 SINE Alu 0 148 19 1 708 371 178 8 144 chr15 16122882 16123000 -87371974 - MT2B LTR ERVL -337 264 163 1 708 24 53 0 0 chr15 16124174 16124212 -87370762 + AT_rich Low_complexity Low_complexity 1 38 0 1 708 1030 101 0 0 chr15 16124413 16124552 -87370422 + B1_Mm SINE Alu 1 139 -8 1 708 197 157 20 0 chr15 16124563 16124600 -87370374 + A-rich Low_complexity Low_complexity 3 40 0 1 708 996 90 14 0 chr15 16124600 16124744 -87370230 + B1_Mus2 SINE Alu 2 147 0 1 708 197 157 20 0 chr15 16124744 16124757 -87370217 + A-rich Low_complexity Low_complexity 41 53 0 1 708 443 349 94 21 chr15 16124944 16125275 -87369699 - MLT1A0 LTR MaLR 0 365 11 1 708 33 56 0 0 chr15 16125694 16125748 -87369226 + AT_rich Low_complexity Low_complexity 1 54 0 1 708 1242 315 28 13 chr15 16125880 16126275 -87368699 - MTD LTR MaLR -1 418 18 1 708 367 321 50 179 chr15 16126297 16126610 -87368364 + MTE2b LTR MaLR 83 387 -32 1 708 1657 31 0 0 chr15 16128389 16128582 -87366392 + B2_Mm1t SINE B2 1 193 0 1 708 349 121 0 15 chr15 16128802 16128869 -87366105 - L1Md_F2 LINE L1 -7 6575 6510 1 708 207 69 0 0 chr15 16128902 16128931 -87366043 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1 708 204 146 24 0 chr15 16128933 16128974 -87366000 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 1 708 552 233 0 8 chr15 16128976 16129093 -87365881 - B1_Mus1 SINE Alu 0 148 33 1 708 459 385 17 0 chr15 16130151 16130330 -87364644 - B3 SINE B2 -34 182 1 1 708 1321 222 78 14 chr15 16130510 16130867 -87364107 - Lx3C LINE L1 -4 6972 6593 1 708 44 63 0 0 chr15 16132672 16132751 -87362223 + AT_rich Low_complexity Low_complexity 1 79 0 1 708 468 258 40 58 chr15 16133031 16133204 -87361770 - MTEa LTR MaLR -4 375 206 1 708 25 65 0 0 chr15 16135079 16135125 -87359849 + AT_rich Low_complexity Low_complexity 1 46 0 1 708 22 56 0 0 chr15 16135554 16135590 -87359384 + AT_rich Low_complexity Low_complexity 1 36 0 1 708 1125 50 7 0 chr15 16135668 16135809 -87359165 + B1_Mm SINE Alu 1 142 -5 1 708 357 125 0 0 chr15 16135816 16135872 -87359102 + (CAA)n Simple_repeat Simple_repeat 2 57 0 1 708 340 312 35 21 chr15 16138169 16138310 -87356664 - B1F2 SINE Alu -5 144 2 1 708 245 266 0 15 chr15 16138368 16138433 -87356541 + GA-rich Low_complexity Low_complexity 1 64 0 1 708 287 104 21 0 chr15 16138545 16138593 -87356381 + (CATA)n Simple_repeat Simple_repeat 4 52 0 2 708 621 290 60 43 chr15 16139301 16139650 -87355324 - ORR1E LTR MaLR -4 355 1 2 708 202 235 20 0 chr15 16139704 16139755 -87355219 + (TATATG)n Simple_repeat Simple_repeat 1 52 0 2 708 1265 45 17 6 chr15 16140054 16140232 -87354742 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2 708 29 28 0 0 chr15 16140548 16140584 -87354390 + AT_rich Low_complexity Low_complexity 1 36 0 2 708 2447 70 0 0 chr15 16140611 16140938 -87354036 - L1Md_F2 LINE L1 -2 6580 6254 2 708 222 37 0 0 chr15 16141047 16141074 -87353900 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 708 307 22 0 42 chr15 16141074 16141113 -87353861 - B1_Mm SINE Alu -9 138 100 2 708 1925 249 11 115 chr15 16141112 16141597 -87353377 - RMER19C LTR ERVK -47 564 128 2 708 233 29 0 29 chr15 16141597 16141632 -87353342 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 708 1925 249 11 115 chr15 16141632 16141763 -87353211 - RMER19C LTR ERVK -484 127 12 2 708 267 146 0 0 chr15 16141763 16141818 -87353156 + (A)n Simple_repeat Simple_repeat 1 55 0 2 708 1115 279 19 3 chr15 16141828 16142137 -87352837 - RLTR30 LTR ERV1 -18 361 48 2 708 456 104 0 0 chr15 16142178 16142245 -87352729 + (TCC)n Simple_repeat Simple_repeat 3 69 0 2 708 3634 229 68 66 chr15 16142246 16143656 -87351318 - L1_Mur3 LINE L1 -4364 1516 97 2 708 216 0 0 0 chr15 16144087 16144111 -87350863 + (A)n Simple_repeat Simple_repeat 1 24 0 2 708 243 152 0 0 chr15 16144376 16144422 -87350552 + T-rich Low_complexity Low_complexity 1 46 0 2 708 368 333 32 11 chr15 16145020 16145205 -87349769 + Lx6 LINE L1 6925 7113 -347 2 708 536 332 0 28 chr15 16145196 16145407 -87349567 + Lx6 LINE L1 7236 7440 -20 2 708 284 48 0 23 chr15 16145418 16145461 -87349513 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 2 708 1068 203 130 8 chr15 16147354 16147607 -87347367 - RMER6C LTR ERVK 0 690 407 2 708 1130 117 6 0 chr15 16147790 16147969 -87347005 + (TC)n Simple_repeat Simple_repeat 1 180 0 2 708 705 175 42 6 chr15 16147971 16148138 -87346836 - L1_Mus3 LINE L1 -19 6619 6447 2 708 1102 98 0 0 chr15 16148142 16148305 -87346669 + MusHAL1 LINE L1 865 1027 -1685 2 708 930 150 310 8 chr15 16148305 16148560 -87346414 - RMER6C LTR ERVK -358 332 1 2 708 640 79 0 29 chr15 16148847 16148951 -87346023 + B1_Mus2 SINE Alu 47 147 0 2 708 29 28 0 0 chr15 16149164 16149200 -87345774 + AT_rich Low_complexity Low_complexity 1 36 0 2 708 663 127 52 0 chr15 16149204 16149338 -87345636 - Lx LINE L1 0 6654 6514 2 708 255 222 12 36 chr15 16149400 16149484 -87345490 + Lx7 LINE L1 7330 7411 -285 2 708 248 264 110 0 chr15 16149573 16149664 -87345310 + Lx6 LINE L1 7320 7420 -40 2 708 36 53 0 0 chr15 16149965 16150022 -87344952 + AT_rich Low_complexity Low_complexity 1 57 0 2 708 26 50 0 0 chr15 16150072 16150112 -87344862 + AT_rich Low_complexity Low_complexity 1 40 0 2 708 204 125 0 0 chr15 16150175 16150207 -87344767 + (T)n Simple_repeat Simple_repeat 1 32 0 2 708 990 68 0 8 chr15 16150222 16150355 -87344619 - B1_Mm SINE Alu -10 137 6 2 708 234 133 0 118 chr15 16150325 16150376 -87344598 - MT2C_Mm LTR ERVL -235 240 196 2 708 4019 128 70 3 chr15 16150376 16151037 -87343937 - Lx2A LINE L1 -44 6964 6260 2 708 33 66 0 0 chr15 16152417 16152478 -87342496 + AT_rich Low_complexity Low_complexity 1 61 0 2 708 252 193 122 0 chr15 16152568 16152635 -87342339 - Lx3B LINE L1 -69 6907 6834 2 708 37 0 0 0 chr15 16153182 16153219 -87341755 + AT_rich Low_complexity Low_complexity 1 37 0 2 708 397 160 56 9 chr15 16153487 16153594 -87341380 - Lx2A1 LINE L1 -5 7003 6892 2 708 2039 146 35 53 chr15 16153614 16154012 -87340962 - Lx2 LINE L1 -40 6957 6567 2 708 617 186 81 2 chr15 16154016 16154165 -87340809 - Lx3B LINE L1 0 6981 6820 2 708 347 140 0 0 chr15 16154247 16154297 -87340677 - Lx2 LINE L1 -453 6544 6495 2 708 537 271 169 92 chr15 16154297 16154569 -87340405 - ORR1E LTR MaLR -66 293 1 2 708 225 197 49 0 chr15 16154873 16154934 -87340040 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 708 2216 271 106 72 chr15 16155945 16156567 -87338407 + Lx6 LINE L1 6468 7139 -321 2 708 714 62 0 0 chr15 16156567 16156663 -87338311 + (GA)n Simple_repeat Simple_repeat 1 96 0 2 708 2216 271 106 72 chr15 16156663 16156893 -87338081 + Lx6 LINE L1 7140 7320 -140 2 708 243 0 0 0 chr15 16156893 16156920 -87338054 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 708 2216 271 106 72 chr15 16156920 16157025 -87337949 + Lx6 LINE L1 7321 7458 -2 2 708 29 60 0 0 chr15 16157671 16157721 -87337253 + AT_rich Low_complexity Low_complexity 1 50 0 2 708 264 353 145 29 chr15 16158307 16158479 -87336495 - MLT1A1 LTR MaLR -21 387 196 2 708 189 107 0 0 chr15 16159930 16159958 -87335016 + (TC)n Simple_repeat Simple_repeat 1 28 0 2 708 357 333 105 0 chr15 16160658 16160763 -87334211 + ID_B1 SINE B4 102 217 -7 2 708 22 70 0 0 chr15 16161219 16161262 -87333712 + AT_rich Low_complexity Low_complexity 1 43 0 2 708 342 123 77 0 chr15 16161486 16161551 -87333423 + Lx7 LINE L1 7626 7695 -1 2 708 4213 44 2 15 chr15 16161612 16162144 -87332830 + L1Md_F2 LINE L1 6058 6582 0 2 708 833 261 54 12 chr15 16162317 16162558 -87332416 - Lx6 LINE L1 -27 7433 7183 2 708 312 364 121 19 chr15 16164435 16164592 -87330382 + B3A SINE B2 10 182 -16 2 708 608 241 14 36 chr15 16164806 16164972 -87330002 + ORR1D2 LTR MaLR 1 125 -245 2 708 454 259 39 45 chr15 16164998 16165152 -87329822 + B3 SINE B2 64 216 0 2 708 450 274 89 0 chr15 16165178 16165335 -87329639 + ORR1D2 LTR MaLR 198 368 -2 2 708 467 271 77 8 chr15 16166258 16166388 -87328586 - B1_Mur3 SINE Alu -10 139 1 2 708 28 61 0 0 chr15 16167301 16167350 -87327624 + AT_rich Low_complexity Low_complexity 1 49 0 2 708 21 36 0 0 chr15 16168367 16168395 -87326579 + AT_rich Low_complexity Low_complexity 1 28 0 2 708 455 332 29 57 chr15 16168585 16168831 -87326143 + MIRb SINE MIR 30 268 0 2 708 198 219 0 0 chr15 16168989 16169053 -87325921 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 708 846 211 14 0 chr15 16169885 16170094 -87324880 - Lx2 LINE L1 0 6997 6786 2 708 387 309 20 54 chr15 16170349 16170496 -87324478 - MTEb LTR MaLR -161 218 77 2 708 387 165 0 0 chr15 16170636 16170745 -87324229 + (TAGA)n Simple_repeat Simple_repeat 4 112 0 2 708 23 33 0 0 chr15 16170917 16170947 -87324027 + AT_rich Low_complexity Low_complexity 1 30 0 2 708 45 45 0 0 chr15 16171572 16171638 -87323336 + AT_rich Low_complexity Low_complexity 1 66 0 2 708 3318 278 35 27 chr15 16171663 16172830 -87322144 + Lx6 LINE L1 5517 6693 -767 2 708 1787 265 105 11 chr15 16172807 16173367 -87321607 + Lx6 LINE L1 6840 7452 -8 2 708 201 152 0 0 chr15 16173367 16173400 -87321574 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 708 1771 186 16 139 chr15 16173834 16173903 -87321071 + ORR1B1 LTR MaLR 11 80 -314 2 708 5107 124 86 5 chr15 16173903 16174737 -87320237 + Lx LINE L1 5749 6650 -4 2 708 1771 186 16 139 chr15 16174737 16175105 -87319869 + ORR1B1 LTR MaLR 81 394 0 2 708 872 178 0 0 chr15 16175105 16175257 -87319717 + ORR1B1-int LTR MaLR 1 152 -1357 2 708 268 351 86 36 chr15 16176184 16176462 -87318512 + MLT1E2 LTR MaLR 221 489 -138 2 708 264 246 42 17 chr15 16176529 16176649 -87318325 + (CATATA)n Simple_repeat Simple_repeat 2 124 0 2 708 23 33 0 0 chr15 16177307 16177337 -87317637 + AT_rich Low_complexity Low_complexity 1 30 0 2 708 21 0 0 0 chr15 16177665 16177686 -87317288 + AT_rich Low_complexity Low_complexity 1 21 0 2 708 231 61 0 0 chr15 16178929 16178962 -87316012 + (TGG)n Simple_repeat Simple_repeat 1 33 0 2 708 704 199 14 14 chr15 16178974 16179122 -87315852 - B1_Mur4 SINE Alu -2 148 1 2 708 225 316 0 0 chr15 16179226 16179305 -87315669 + (TATATG)n Simple_repeat Simple_repeat 4 82 0 2 708 629 336 62 83 chr15 16179542 16180013 -87314961 + MT2A LTR ERVL 63 523 -10 2 708 34 65 0 0 chr15 16180962 16181024 -87313950 + AT_rich Low_complexity Low_complexity 1 62 0 2 708 307 387 10 31 chr15 16181024 16181216 -87313758 + Lx8 LINE L1 7164 7351 -122 2 708 27 0 0 0 chr15 16181287 16181314 -87313660 + AT_rich Low_complexity Low_complexity 1 27 0 2 708 23 86 0 0 chr15 16181911 16181969 -87313005 + AT_rich Low_complexity Low_complexity 1 58 0 2 708 39 0 0 0 chr15 16183312 16183351 -87311623 + AT_rich Low_complexity Low_complexity 1 39 0 2 708 3481 85 4 20 chr15 16183354 16183856 -87311118 - L1Md_F2 LINE L1 -4 6578 6085 2 708 26 30 0 0 chr15 16184050 16184083 -87310891 + AT_rich Low_complexity Low_complexity 1 33 0 2 708 2394 162 18 26 chr15 16184595 16184709 -87310265 - RLTR11B LTR ERVK 0 453 336 2 708 297 0 0 0 chr15 16184709 16184742 -87310232 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 2 708 2394 162 18 26 chr15 16184742 16185083 -87309891 - RLTR11B LTR ERVK -118 335 2 2 708 836 0 0 0 chr15 16186293 16186398 -87308576 - L1Md_A LINE L1 0 6582 6478 2 708 3002 224 141 13 chr15 16186591 16187455 -87307519 + ORR1B1-int LTR MaLR 535 1509 0 2 708 1764 227 17 6 chr15 16187455 16187808 -87307166 + ORR1B1 LTR MaLR 38 394 0 2 708 269 330 85 0 chr15 16187926 16188020 -87306954 + Tigger7 DNA MER2_type 2377 2478 -13 2 708 3609 204 47 19 chr15 16189905 16190700 -87304274 - Lx4B LINE L1 -4 7054 6238 2 708 2128 135 55 10 chr15 16190698 16191081 -87303893 - L1_Mur2 LINE L1 -1319 4558 4159 2 708 2433 203 7 6 chr15 16191136 16191686 -87303288 - L1_Mur2 LINE L1 -4039 1838 1288 2 708 1122 265 38 3 chr15 16191679 16192020 -87302954 - L1VL4 LINE L1 -5417 885 533 2 708 41 21 0 0 chr15 16192327 16192375 -87302599 + AT_rich Low_complexity Low_complexity 1 48 0 2 708 1102 83 0 0 chr15 16192386 16192531 -87302443 - B1_Mus1 SINE Alu 0 148 4 2 708 33 85 0 0 chr15 16192910 16192992 -87301982 + AT_rich Low_complexity Low_complexity 1 82 0 2 708 333 100 0 0 chr15 16193887 16193937 -87301037 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 708 304 179 0 29 chr15 16194403 16194472 -87300502 - L1_Mur3 LINE L1 -1403 4477 4411 2 708 414 0 0 0 chr15 16194578 16194624 -87300350 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 2 708 1037 137 0 12 chr15 16194624 16194787 -87300187 - B2_Mm2 SINE B2 -34 161 1 2 708 849 261 103 17 chr15 16194789 16195364 -87299610 - L1_Mur3 LINE L1 -1657 4223 3512 2 708 240 192 0 0 chr15 16195406 16195458 -87299516 + (CAAA)n Simple_repeat Simple_repeat 2 53 0 2 708 1907 240 96 18 chr15 16195458 16196112 -87298862 + L1_Mur3 LINE L1 4628 5332 -548 3 708 5627 181 44 29 chr15 16196143 16197957 -87297017 + L1_Mur1 LINE L1 522 2415 -3471 3 708 213 94 0 0 chr15 16197962 16197994 -87296980 + (CATAA)n Simple_repeat Simple_repeat 2 33 0 3 708 480 35 0 0 chr15 16197994 16198052 -87296922 + (TA)n Simple_repeat Simple_repeat 1 58 0 3 708 2821 214 75 17 chr15 16198052 16198426 -87296548 + L1_Mur1 LINE L1 3003 3402 -2484 3 708 342 0 0 0 chr15 16198426 16198464 -87296510 + (CAAT)n Simple_repeat Simple_repeat 2 39 0 3 708 2821 214 75 17 chr15 16198464 16198898 -87296076 + L1_Mur1 LINE L1 3403 3857 -2029 3 708 21 0 0 0 chr15 16199430 16199451 -87295523 + AT_rich Low_complexity Low_complexity 1 21 0 3 708 468 240 96 0 chr15 16200251 16200355 -87294619 - B1_Mur2 SINE Alu -7 142 29 3 708 276 30 0 0 chr15 16200685 16200718 -87294256 + (CTG)n Simple_repeat Simple_repeat 2 34 0 3 708 987 160 0 0 chr15 16200716 16200891 -87294083 + CT-rich Low_complexity Low_complexity 1 175 0 3 708 611 316 140 51 chr15 16201110 16201684 -87293290 + L1M2 LINE L1 4736 5359 -787 3 708 414 85 0 0 chr15 16202325 16202384 -87292590 + (TATG)n Simple_repeat Simple_repeat 1 59 0 3 708 28 48 0 0 chr15 16203332 16203374 -87291600 + AT_rich Low_complexity Low_complexity 1 42 0 3 708 21 89 0 0 chr15 16203476 16203532 -87291442 + AT_rich Low_complexity Low_complexity 1 56 0 3 708 563 13 0 13 chr15 16204180 16204258 -87290716 + L1Md_F2 LINE L1 6496 6572 -10 3 708 334 132 13 13 chr15 16204348 16204425 -87290549 + CT-rich Low_complexity Low_complexity 1 77 0 3 708 347 347 69 57 chr15 16205243 16205402 -87289572 + B3 SINE B2 1 161 -55 3 708 183 215 12 37 chr15 16205456 16205538 -87289436 + GA-rich Low_complexity Low_complexity 3 82 0 3 708 1000 104 0 0 chr15 16205550 16205685 -87289289 - B1_Mm SINE Alu -12 135 1 3 708 565 91 0 0 chr15 16205701 16205778 -87289196 - tRNA-Asn-AAC tRNA tRNA 0 77 1 3 708 341 320 39 7 chr15 16205916 16206070 -87288904 + Lx7 LINE L1 7146 7304 -392 3 708 5730 106 41 2 chr15 16206640 16207580 -87287394 - L1_Mus3 LINE L1 -16 6638 5591 3 708 307 76 65 43 chr15 16207608 16207746 -87287228 + A-rich Low_complexity Low_complexity 5 145 0 3 708 1235 140 14 213 chr15 16207746 16208117 -87286857 + L1_Mm LINE L1 5252 5548 -335 3 708 1452 236 0 0 chr15 16208253 16208546 -87286428 + L1_Mur1 LINE L1 5508 5800 -86 3 708 242 327 18 91 chr15 16208887 16208913 -87286061 - B2_Mm1a SINE B2 -29 164 141 3 708 360 0 0 0 chr15 16208913 16208953 -87286021 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 708 357 327 6 35 chr15 16208953 16209096 -87285878 - B3A SINE B2 -53 140 8 3 708 2061 179 177 38 chr15 16209069 16209668 -87285306 - RMER6C LTR ERVK -8 682 1 3 708 23 78 0 0 chr15 16209978 16210029 -87284945 + AT_rich Low_complexity Low_complexity 1 51 0 3 708 352 132 72 0 chr15 16210060 16210212 -87284762 + (TA)n Simple_repeat Simple_repeat 2 164 0 3 708 207 0 0 0 chr15 16210238 16210261 -87284713 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 708 1048 93 0 0 chr15 16210266 16210406 -87284568 - B1_Mus1 SINE Alu -7 141 2 3 708 228 67 0 0 chr15 16210510 16210540 -87284434 + (TATG)n Simple_repeat Simple_repeat 3 32 0 3 708 5904 57 3 0 chr15 16210606 16211345 -87283629 - L1Md_F2 LINE L1 -69 5814 5074 3 708 6412 54 2 0 chr15 16211345 16212147 -87282827 + L1Md_F2 LINE L1 5767 6570 -12 3 708 225 169 0 0 chr15 16212962 16213021 -87281953 + (CAA)n Simple_repeat Simple_repeat 2 60 0 3 708 2074 136 8 6 chr15 16213299 16213654 -87281320 + Lx2 LINE L1 6642 6997 0 3 708 4094 154 47 0 chr15 16213834 16214561 -87280413 - Lx2 LINE L1 0 6997 6237 3 708 1176 48 0 0 chr15 16214817 16214964 -87280010 + (TCTCC)n Simple_repeat Simple_repeat 5 151 0 3 708 234 314 14 41 chr15 16215122 16215195 -87279779 - LTR78 LTR ERV1 -1031 273 203 3 708 381 43 0 0 chr15 16215951 16215998 -87278976 + (TAA)n Simple_repeat Simple_repeat 3 49 0 3 708 1083 188 32 23 chr15 16217120 16217338 -87277636 + Lx4A LINE L1 6831 7050 -8 3 708 320 0 0 24 chr15 16217339 16217380 -87277594 + (TAA)n Simple_repeat Simple_repeat 2 41 0 3 708 368 296 0 20 chr15 16217710 16217810 -87277164 + RSINE1 SINE B4 28 125 -40 3 708 574 339 30 30 chr15 16217816 16218047 -87276927 - Lx7 LINE L1 -1015 6681 6451 3 708 545 286 30 23 chr15 16218048 16218313 -87276661 + L1_Mur3 LINE L1 2427 2693 -3187 3 708 934 110 0 64 chr15 16220453 16220609 -87274365 + B1_Mm SINE Alu 1 146 -1 3 708 220 91 22 22 chr15 16220806 16220851 -87274123 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 708 225 267 11 34 chr15 16220866 16220955 -87274019 + (TATATG)n Simple_repeat Simple_repeat 2 88 0 3 708 2944 67 26 0 chr15 16221070 16221456 -87273518 - MTA_Mm LTR MaLR 0 396 1 3 708 7818 64 5 9 chr15 16221456 16222178 -87272796 - MTA_Mm-int LTR MaLR 0 1098 380 3 708 6655 38 0 2 chr15 16222178 16222981 -87271993 - L1Md_F3 LINE L1 0 6584 5784 3 708 8111 63 5 9 chr15 16222981 16223361 -87271613 - MTA_Mm-int LTR MaLR -719 379 1 3 708 2992 79 5 2 chr15 16223361 16223756 -87271218 - MTA_Mm LTR MaLR 0 396 1 3 708 214 220 16 33 chr15 16223904 16223965 -87271009 + RSINE1 SINE B4 73 132 -33 3 708 1795 53 4 0 chr15 16224271 16224497 -87270477 - L1_Mus3 LINE L1 -793 5845 5619 3 708 752 110 0 0 chr15 16224496 16224614 -87270360 + L1_Mus3 LINE L1 5841 5958 -608 3 708 854 45 7 36 chr15 16224614 16224752 -87270222 + L1Md_F2 LINE L1 6448 6581 -1 3 708 3083 62 25 0 chr15 16224799 16225200 -87269774 + RLTR10A LTR ERVK 1 411 0 3 708 4662 103 4 18 chr15 16225217 16225927 -87269047 + L1_Mus3 LINE L1 5939 6638 0 3 708 249 312 109 9 chr15 16226080 16226190 -87268784 - MLT1B LTR MaLR -252 138 18 3 708 21 0 0 0 chr15 16226279 16226300 -87268674 + AT_rich Low_complexity Low_complexity 1 21 0 3 708 678 25 0 0 chr15 16227112 16227192 -87267782 + (GAGAA)n Simple_repeat Simple_repeat 3 82 0 3 708 575 117 40 40 chr15 16227204 16227329 -87267645 + Lx2A1 LINE L1 6884 7008 0 3 708 1708 82 25 4 chr15 16227359 16227604 -87267370 + L1_Mus2 LINE L1 6316 6565 -1 3 708 246 321 60 5 chr15 16228126 16228223 -87266751 + L1M3 LINE L1 4801 4898 -1242 3 708 609 40 0 0 chr15 16228223 16228299 -87266675 + (TTTC)n Simple_repeat Simple_repeat 1 76 0 3 708 967 155 5 30 chr15 16228300 16228500 -87266474 - Lx LINE L1 -7 6647 6453 3 708 246 321 60 5 chr15 16228500 16228616 -87266358 + L1M3 LINE L1 4899 5025 -1115 3 708 10556 57 7 1 chr15 16229601 16230938 -87264036 + L1_Mm LINE L1 4242 5587 -296 3 708 7663 56 5 7 chr15 16230938 16231923 -87263051 + L1Md_F2 LINE L1 5588 6570 -12 3 708 367 318 98 30 chr15 16231998 16232131 -87262843 - B1_Mur4 SINE Alu -8 142 1 3 708 21 0 0 0 chr15 16232134 16232155 -87262819 + AT_rich Low_complexity Low_complexity 1 21 0 3 708 522 91 0 0 chr15 16232233 16232310 -87262664 + (TG)n Simple_repeat Simple_repeat 2 78 0 3 708 2618 149 0 16 chr15 16232648 16233133 -87261841 - L1_Mur2 LINE L1 -1148 4729 4253 3 708 39578 28 2 6 chr15 16233130 16239328 -87255646 - L1Md_T LINE L1 -1 6581 416 3 708 1269 176 4 0 chr15 16239324 16239562 -87255412 - L1_Mur2 LINE L1 -1606 4271 4033 3 708 1196 174 4 22 chr15 16239565 16239794 -87255180 + Lx2 LINE L1 6768 6992 -5 3 708 23 33 0 0 chr15 16240087 16240117 -87254857 + AT_rich Low_complexity Low_complexity 1 30 0 3 708 21 71 0 0 chr15 16240179 16240221 -87254753 + AT_rich Low_complexity Low_complexity 1 42 0 3 708 23 54 0 0 chr15 16240292 16240329 -87254645 + AT_rich Low_complexity Low_complexity 1 37 0 3 708 366 321 37 0 chr15 16241100 16241234 -87253740 - B1F2 SINE Alu -7 142 4 3 708 23 54 0 0 chr15 16241320 16241357 -87253617 + AT_rich Low_complexity Low_complexity 1 37 0 3 708 297 254 61 122 chr15 16242353 16242501 -87252473 - MTE2a LTR MaLR 0 379 241 3 708 206 136 23 0 chr15 16243551 16243595 -87251379 + (TTA)n Simple_repeat Simple_repeat 2 46 0 3 708 22 0 0 0 chr15 16246535 16246557 -87248417 + AT_rich Low_complexity Low_complexity 1 22 0 3 708 289 219 54 14 chr15 16246632 16246706 -87248268 + B1F1 SINE Alu 21 97 -52 3 708 237 347 31 74 chr15 16246730 16246892 -87248082 + MER63C DNA AcHobo 185 339 -591 3 708 244 328 78 31 chr15 16247208 16247337 -87247637 - ORR1E LTR MaLR -224 135 1 3 708 198 304 81 65 chr15 16247501 16247624 -87247350 - L2a LINE L2 -13 3413 3289 3 708 291 294 56 42 chr15 16248074 16248216 -87246758 + LTR16A LTR ERVL 300 443 -8 3 708 4080 221 176 14 chr15 16248867 16249245 -87245729 + Lx5 LINE L1 901 1380 -4497 3 708 253 43 65 0 chr15 16249245 16249291 -87245683 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 3 708 4080 220 77 25 chr15 16249291 16249961 -87245013 + Lx5 LINE L1 1381 2050 -3827 3 708 360 0 0 0 chr15 16249961 16250001 -87244973 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 708 4080 220 77 25 chr15 16250001 16250409 -87244565 + Lx5 LINE L1 2051 2498 -3379 3 708 541 167 61 20 chr15 16250409 16250556 -87244418 + Lx3_Mus LINE L1 6855 7007 -2 3 708 5494 219 146 101 chr15 16250556 16251116 -87243858 + Lx5 LINE L1 3692 4303 -1574 3 708 451 212 0 96 chr15 16251116 16251139 -87243835 + MT2B LTR ERVL 145 155 -446 3 708 819 75 0 0 chr15 16251139 16251246 -87243728 + B1_Mm SINE Alu 1 107 -40 3 708 269 209 72 29 chr15 16251184 16251253 -87243721 + RLTR25A LTR ERVK 522 593 -510 3 708 1316 81 27 0 chr15 16251261 16251446 -87243528 + B2_Mm1t SINE B2 2 191 -2 3 708 5494 219 146 101 chr15 16251446 16252213 -87242761 + Lx5 LINE L1 4314 5166 -711 3 708 375 23 0 0 chr15 16252213 16252257 -87242717 + (TA)n Simple_repeat Simple_repeat 1 44 0 3 88 5494 241 91 42 chr15 16252257 16253960 -87241014 + Lx5 LINE L1 5167 7010 -40 3 709 2888 67 20 15 chr15 16254691 16255085 -87239889 - MTA_Mm LTR MaLR 0 396 1 3 709 243 0 0 0 chr15 16255353 16255380 -87239594 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 709 229 274 89 54 chr15 16255616 16255728 -87239246 + B1F1 SINE Alu 33 148 -1 3 709 33 43 0 0 chr15 16256797 16256844 -87238130 + AT_rich Low_complexity Low_complexity 1 47 0 3 709 2001 214 108 43 chr15 16258483 16258759 -87236215 + RMER6C LTR ERVK 11 299 -391 3 709 927 149 0 52 chr15 16258759 16258950 -87236024 + L1Md_F2 LINE L1 6401 6581 -1 3 709 2001 214 108 43 chr15 16258950 16259255 -87235719 + RMER6C LTR ERVK 300 630 -60 3 709 22 35 0 0 chr15 16259773 16259802 -87235172 + AT_rich Low_complexity Low_complexity 1 29 0 3 709 1051 291 70 15 chr15 16260888 16261216 -87233758 - ORR1D1 LTR MaLR 0 374 29 3 709 398 288 129 16 chr15 16261480 16261674 -87233300 - B3 SINE B2 0 216 1 3 709 447 259 122 0 chr15 16262151 16262281 -87232693 + URR1B DNA MER1_type 1 146 -79 4 709 7075 91 19 20 chr15 16262281 16263306 -87231668 + RLTR13D5 LTR ERVK 1 1023 0 4 709 260 200 211 13 chr15 16263306 16263377 -87231597 + URR1B DNA MER1_type 140 225 0 4 709 183 42 0 0 chr15 16263579 16263603 -87231371 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 709 1810 133 32 16 chr15 16263927 16264239 -87230735 + ORR1A4 LTR MaLR 1 317 -12 4 709 360 0 0 0 chr15 16264321 16264361 -87230613 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 709 443 368 0 0 chr15 16264395 16264550 -87230424 - RSINE1 SINE B4 -3 162 8 4 709 1240 273 50 25 chr15 16264585 16264946 -87230028 - Lx6 LINE L1 -4 7456 7087 4 709 1079 292 26 58 chr15 16264945 16265032 -87229942 - Lx6 LINE L1 -1207 6253 6171 4 709 2591 53 0 0 chr15 16265032 16265350 -87229624 + L1_Mus1 LINE L1 6249 6566 -1 4 709 1079 292 26 58 chr15 16265350 16265691 -87229283 - Lx6 LINE L1 -1290 6170 5839 4 709 3902 147 8 3 chr15 16265684 16266286 -87228688 - Lx3B LINE L1 -127 6846 6242 4 709 319 103 58 14 chr15 16266587 16266656 -87228318 + Lx9 LINE L1 7516 7587 -57 4 709 22 0 0 0 chr15 16267535 16267557 -87227417 + AT_rich Low_complexity Low_complexity 1 22 0 4 709 21 0 0 0 chr15 16268125 16268146 -87226828 + AT_rich Low_complexity Low_complexity 1 21 0 4 709 30 27 0 0 chr15 16268332 16268369 -87226605 + AT_rich Low_complexity Low_complexity 1 37 0 4 709 305 376 0 29 chr15 16270185 16270322 -87224652 + Lx5 LINE L1 6840 6972 -78 4 709 4596 178 11 3 chr15 16270318 16271188 -87223786 + L1_Mm LINE L1 4226 5102 -781 4 709 1103 57 0 0 chr15 16271166 16271306 -87223668 + L1_Mus4 LINE L1 5675 5814 -822 4 709 234 169 21 63 chr15 16271336 16271431 -87223543 + (TATAA)n Simple_repeat Simple_repeat 1 91 0 4 709 1115 182 56 5 chr15 16272303 16272518 -87222456 + URR1A DNA MER1_type 1 226 0 4 709 948 314 21 26 chr15 16272665 16273005 -87221969 + Lx8 LINE L1 6207 6544 -929 4 709 25 0 0 0 chr15 16273159 16273184 -87221790 + AT_rich Low_complexity Low_complexity 1 25 0 4 709 23 54 0 0 chr15 16273301 16273338 -87221636 + AT_rich Low_complexity Low_complexity 1 37 0 4 709 27 62 0 0 chr15 16273442 16273490 -87221484 + AT_rich Low_complexity Low_complexity 1 48 0 4 709 1154 68 7 0 chr15 16273754 16273900 -87221074 + B1_Mus1 SINE Alu 2 148 0 4 709 468 0 0 0 chr15 16274275 16274327 -87220647 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 709 729 111 44 0 chr15 16274802 16274937 -87220037 - L1_Mus3 LINE L1 -2 6636 6496 4 709 1208 54 0 0 chr15 16274953 16275100 -87219874 - B1_Mm SINE Alu 0 147 1 4 709 5171 182 12 8 chr15 16275471 16276396 -87218578 + Lx5 LINE L1 5662 6590 -460 4 709 790 286 29 41 chr15 16276421 16276665 -87218309 + Lx5 LINE L1 6809 7049 -1 4 709 207 170 43 0 chr15 16276669 16276716 -87218258 + (TTTG)n Simple_repeat Simple_repeat 3 51 0 4 709 22262 112 180 13 chr15 16276728 16282108 -87212866 - L1Md_F2 LINE L1 -12 6570 217 4 709 30 69 0 0 chr15 16282292 16282350 -87212624 + AT_rich Low_complexity Low_complexity 1 58 0 4 709 1170 152 74 22 chr15 16282742 16282971 -87212003 + Lx3A LINE L1 6733 6973 -8 4 709 378 351 83 43 chr15 16284216 16284564 -87210410 - Lx8 LINE L1 -1017 6679 6313 4 709 1451 194 9 40 chr15 16284653 16284759 -87210215 - RMER6A LTR ERVK -112 644 542 4 709 1509 168 219 25 chr15 16284759 16285119 -87209855 + RLTR23 LTR ERV1 1 430 0 4 709 1451 194 9 40 chr15 16285119 16285334 -87209640 - RMER6A LTR ERVK -215 541 333 4 709 766 178 7 7 chr15 16285307 16285454 -87209520 - RMER6A LTR ERVK -571 185 39 4 709 27 29 0 0 chr15 16285468 16285502 -87209472 + AT_rich Low_complexity Low_complexity 1 34 0 4 709 32 26 0 0 chr15 16286830 16286869 -87208105 + AT_rich Low_complexity Low_complexity 1 39 0 4 709 23 0 0 0 chr15 16287204 16287227 -87207747 + AT_rich Low_complexity Low_complexity 1 23 0 4 709 198 0 0 0 chr15 16287681 16287703 -87207271 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 4 709 568 282 46 137 chr15 16288179 16288615 -87206359 - ORR1C2 LTR MaLR -2 382 6 4 709 396 295 9 19 chr15 16288615 16288722 -87206252 - ORR1C2 LTR MaLR -179 180 75 4 709 26 0 0 0 chr15 16289232 16289258 -87205716 + AT_rich Low_complexity Low_complexity 1 26 0 4 709 1872 250 19 34 chr15 16289449 16290155 -87204819 + RLTR25A LTR ERVK 1 745 -283 4 709 2351 194 22 8 chr15 16290157 16290645 -87204329 - Lx2 LINE L1 -901 4982 4488 4 709 5068 181 37 73 chr15 16290651 16292767 -87202207 + Lx2 LINE L1 4973 6995 -2 4 709 21 0 0 0 chr15 16292767 16292788 -87202186 + AT_rich Low_complexity Low_complexity 1 21 0 4 709 519 220 37 29 chr15 16292825 16292961 -87202013 + RLTR25A LTR ERVK 892 1028 0 4 709 300 242 0 16 chr15 16293124 16293187 -87201787 - HAL1-3A_ME LINE L1 -819 2039 1978 4 709 364 241 38 55 chr15 16293759 16293926 -87201048 - MTC LTR MaLR -22 399 188 4 709 251 283 77 14 chr15 16293903 16294054 -87200920 - MTC LTR MaLR -144 235 95 4 709 6386 156 17 14 chr15 16294076 16294962 -87200012 + Lx3B LINE L1 5873 6768 -205 4 709 423 0 0 0 chr15 16294962 16295009 -87199965 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 709 594 41 0 0 chr15 16295009 16295081 -87199893 + (TA)n Simple_repeat Simple_repeat 1 73 0 4 709 6386 156 17 14 chr15 16295081 16295286 -87199688 + Lx3B LINE L1 6769 6968 -5 4 709 25 0 0 0 chr15 16295296 16295321 -87199653 + AT_rich Low_complexity Low_complexity 1 25 0 4 709 1955 188 22 50 chr15 16295637 16296040 -87198934 - ORR1B1 LTR MaLR 0 394 3 4 709 1018 50 21 0 chr15 16296474 16296614 -87198360 + (TTTTC)n Simple_repeat Simple_repeat 2 144 0 4 709 21 0 0 0 chr15 16297268 16297289 -87197685 + AT_rich Low_complexity Low_complexity 1 21 0 4 709 204 40 0 0 chr15 16297379 16297404 -87197570 + (A)n Simple_repeat Simple_repeat 1 25 0 4 709 565 295 8 95 chr15 16298674 16298764 -87196210 + Lx9 LINE L1 6932 7021 -623 4 709 282 29 0 0 chr15 16298764 16298799 -87196175 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 709 565 295 8 95 chr15 16298799 16298970 -87196004 + Lx9 LINE L1 7022 7170 -474 4 709 1183 190 97 11 chr15 16299622 16299986 -87194988 + L1_Mur3 LINE L1 2953 3314 -2533 4 709 1298 108 0 5 chr15 16300172 16300359 -87194615 - B2_Mm2 SINE B2 -9 186 1 4 709 218 208 0 0 chr15 16300675 16300723 -87194251 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 709 1043 247 8 16 chr15 16301648 16301895 -87193079 + Lx6 LINE L1 7211 7455 -5 4 709 395 68 17 0 chr15 16302826 16302885 -87192089 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 709 990 75 0 8 chr15 16302885 16303019 -87191955 + RLTR9E LTR ERVK 7 139 -270 4 709 694 36 0 0 chr15 16303021 16303105 -87191869 - L1Md_F2 LINE L1 -286 6296 6213 4 709 2223 46 4 0 chr15 16303105 16303386 -87191588 + L1Md_F2 LINE L1 6301 6582 0 4 709 1638 144 11 4 chr15 16303386 16303658 -87191316 + RLTR9E LTR ERVK 131 404 -5 4 709 383 127 0 37 chr15 16303661 16303743 -87191231 + GA-rich Low_complexity Low_complexity 2 80 0 4 709 28 48 0 0 chr15 16303773 16303815 -87191159 + AT_rich Low_complexity Low_complexity 1 42 0 4 709 1326 293 44 53 chr15 16303900 16304469 -87190505 - Lx9 LINE L1 -522 7122 6559 4 709 282 332 265 35 chr15 16304474 16304761 -87190213 + MTD LTR MaLR 1 353 -66 4 709 2952 169 21 57 chr15 16304854 16305470 -87189504 - Lx4A LINE L1 -2 7056 6463 4 709 671 374 72 40 chr15 16306173 16306977 -87187997 - Lx8 LINE L1 -357 7116 6287 4 709 8941 102 26 44 chr15 16307193 16308314 -87186660 - Lx3_Mus LINE L1 -8 7001 5909 4 709 564 15 0 0 chr15 16308314 16308379 -87186595 + (TC)n Simple_repeat Simple_repeat 2 66 0 4 709 9033 102 23 7 chr15 16308379 16309743 -87185231 - Lx3_Mus LINE L1 -1101 5908 4526 4 709 717 169 0 0 chr15 16309760 16309896 -87185078 + (TG)n Simple_repeat Simple_repeat 1 136 0 4 709 506 326 27 20 chr15 16309896 16310046 -87184928 - RSINE1 SINE B4 0 165 15 4 709 34 18 0 50 chr15 16312149 16312209 -87182765 + AT_rich Low_complexity Low_complexity 1 57 0 4 709 25 51 0 0 chr15 16312463 16312502 -87182472 + AT_rich Low_complexity Low_complexity 1 39 0 4 709 4620 63 12 0 chr15 16312541 16313132 -87181842 - L1Md_F2 LINE L1 -12 6570 5973 4 709 216 128 0 79 chr15 16313313 16313389 -87181585 + (CAGAGA)n Simple_repeat Simple_repeat 1 70 0 4 709 372 22 0 0 chr15 16313399 16313444 -87181530 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 709 1155 285 39 141 chr15 16314269 16314414 -87180560 + RMER15 LTR ERVL 3 106 -469 4 709 359 73 18 0 chr15 16314414 16314469 -87180505 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 4 709 1155 285 39 141 chr15 16314469 16314961 -87180013 + RMER15 LTR ERVL 107 575 0 4 709 429 118 0 0 chr15 16314999 16315075 -87179899 + Lx LINE L1 6579 6654 0 4 709 384 0 0 51 chr15 16315111 16315170 -87179804 + (TAA)n Simple_repeat Simple_repeat 2 57 0 4 709 3200 106 0 30 chr15 16315171 16315667 -87179307 + L1_Mus4 LINE L1 6156 6636 0 4 709 9193 88 2 1 chr15 16315768 16317170 -87177804 + L1Md_A LINE L1 1116 2518 -3365 4 709 37808 42 0 3 chr15 16317178 16323435 -87171539 - L1Md_T LINE L1 0 6585 253 4 709 2677 105 12 0 chr15 16323436 16323837 -87171137 + L1Md_A LINE L1 2503 2908 -2975 4 709 11785 71 2 14 chr15 16323844 16326169 -87168805 - L1Md_F2 LINE L1 -4 6578 4291 4 709 7313 67 8 0 chr15 16326163 16327150 -87167824 + L1Md_F2 LINE L1 3365 4359 -1524 4 709 5262 121 11 12 chr15 16327151 16327549 -87167425 + L1Md_F2 LINE L1 5774 6171 -411 4 709 2991 32 0 0 chr15 16327549 16327895 -87167079 + ORR1A0 LTR MaLR 1 346 0 4 709 5262 121 11 12 chr15 16327895 16328306 -87166668 + L1Md_F2 LINE L1 6172 6582 0 4 709 3008 124 4 0 chr15 16328314 16328789 -87166185 - L1_Mm LINE L1 -476 5407 4931 4 709 4890 65 0 6 chr15 16328789 16329420 -87165554 + L1_Mus1 LINE L1 5941 6567 0 4 709 520 351 44 14 chr15 16329630 16329905 -87165069 - MTEb LTR MaLR -4 375 93 4 709 307 291 20 27 chr15 16329899 16330021 -87164953 - MLT1A0 LTR MaLR -46 362 220 4 709 229 293 69 69 chr15 16330356 16330602 -87164372 + L1MC3 LINE L1 6811 7056 -729 4 709 1908 155 3 0 chr15 16330851 16331167 -87163807 - ORR1A2 LTR MaLR -8 319 3 4 709 2223 239 13 41 chr15 16331230 16331782 -87163192 - RMER20B LTR ERVK 0 627 98 4 709 349 312 64 27 chr15 16332017 16332313 -87162661 + L1MA4 LINE L1 5601 5907 -393 4 709 500 186 9 0 chr15 16332313 16332426 -87162548 + (TA)n Simple_repeat Simple_repeat 2 115 0 4 709 315 0 0 0 chr15 16332499 16332534 -87162440 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 4 709 1122 78 0 7 chr15 16332970 16333125 -87161849 - L1_Mus2 LINE L1 0 6566 6413 4 709 205 191 0 0 chr15 16333208 16333250 -87161724 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 709 25 31 0 0 chr15 16333296 16333328 -87161646 + AT_rich Low_complexity Low_complexity 1 32 0 4 709 2083 179 46 161 chr15 16333437 16334361 -87160613 - RMER6C LTR ERVK 0 720 3 4 709 1019 271 61 67 chr15 16334438 16334814 -87160160 - ORR1D1 LTR MaLR 0 374 1 5 709 236 368 0 0 chr15 16334844 16334912 -87160062 - ID4_ SINE ID -2 81 14 5 709 593 97 0 10 chr15 16334915 16335019 -87159955 + (GA)n Simple_repeat Simple_repeat 2 104 0 5 709 21 0 0 0 chr15 16335690 16335711 -87159263 + AT_rich Low_complexity Low_complexity 1 21 0 5 709 452 200 4 0 chr15 16337150 16337240 -87157734 + B1_Mur3 SINE Alu 49 140 -9 5 709 455 48 16 0 chr15 16337241 16337303 -87157671 + (TAAAA)n Simple_repeat Simple_repeat 3 65 0 5 709 1894 199 30 66 chr15 16338091 16338528 -87156446 + MTC LTR MaLR 1 421 0 5 709 264 122 0 0 chr15 16338808 16338849 -87156125 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 709 314 298 42 34 chr15 16338925 16339124 -87155850 + L1_Rod LINE L1 5365 5582 -715 5 709 473 271 185 46 chr15 16339385 16339711 -87155263 - RMER13A LTR ERVK -392 468 98 5 709 345 279 103 28 chr15 16339827 16340041 -87154933 + L1_Rod LINE L1 5583 5812 -488 5 709 28 29 0 0 chr15 16340057 16340092 -87154882 + AT_rich Low_complexity Low_complexity 1 35 0 5 709 3111 70 0 2 chr15 16340094 16340495 -87154479 + MTB LTR MaLR 1 400 0 5 709 985 322 101 39 chr15 16341183 16341826 -87153148 - Lx8 LINE L1 -450 7023 6341 5 709 22 0 0 0 chr15 16342083 16342105 -87152869 + AT_rich Low_complexity Low_complexity 1 22 0 5 709 2970 166 50 0 chr15 16342304 16342828 -87152146 - Lx2B LINE L1 0 7000 6451 5 709 279 362 147 23 chr15 16343499 16343765 -87151209 - L1M1 LINE L1 -533 5767 5469 5 709 645 301 35 5 chr15 16344251 16344451 -87150523 - B3 SINE B2 -9 207 2 5 709 2246 268 40 25 chr15 16344778 16345270 -87149704 - Lx9 LINE L1 0 7644 7128 5 709 2784 38 0 0 chr15 16345270 16345610 -87149364 - L1Md_A LINE L1 0 6582 6243 5 709 2246 268 40 25 chr15 16345610 16345666 -87149308 - Lx9 LINE L1 -517 7127 7083 5 709 633 105 0 0 chr15 16345666 16345761 -87149213 + (TA)n Simple_repeat Simple_repeat 2 96 0 5 709 2246 268 40 25 chr15 16345761 16345942 -87149032 - Lx9 LINE L1 -562 7082 6903 5 709 408 345 67 73 chr15 16346320 16346676 -87148298 - ORR1E LTR MaLR -4 355 2 5 709 441 110 0 0 chr15 16347520 16347593 -87147381 + (GGA)n Simple_repeat Simple_repeat 3 75 0 5 709 227 294 42 32 chr15 16347593 16347688 -87147286 + ID_B1 SINE B4 122 217 -7 5 709 228 67 0 0 chr15 16348043 16348073 -87146901 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 5 709 1105 76 7 0 chr15 16348144 16348289 -87146685 - B1_Mus1 SINE Alu 0 148 3 5 709 1122 288 105 18 chr15 16348444 16348988 -87145986 + Lx5 LINE L1 6457 7047 -3 5 709 30 27 0 0 chr15 16348988 16349025 -87145949 + AT_rich Low_complexity Low_complexity 1 37 0 5 709 365 286 0 43 chr15 16349886 16350003 -87144971 + MER3 DNA MER1_type 16 127 -82 5 709 291 372 8 34 chr15 16352232 16352349 -87142625 + RSINE1 SINE B4 12 125 -40 5 709 24 53 0 0 chr15 16352398 16352436 -87142538 + AT_rich Low_complexity Low_complexity 1 38 0 5 709 200 132 28 42 chr15 16353193 16353264 -87141710 + (TTTA)n Simple_repeat Simple_repeat 2 71 0 5 709 2735 43 0 14 chr15 16353516 16353870 -87141104 - L1Md_F3 LINE L1 -2 6582 6234 5 709 201 186 0 23 chr15 16353993 16354037 -87140937 + CT-rich Low_complexity Low_complexity 1 43 0 5 709 360 59 0 0 chr15 16354325 16354376 -87140598 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 709 2882 108 0 16 chr15 16355238 16355670 -87139304 - L1_Mus2 LINE L1 -1 6565 6141 5 709 987 58 0 14 chr15 16355702 16355841 -87139133 - L1Md_F2 LINE L1 -12 6570 6434 5 709 1200 95 12 0 chr15 16355840 16356009 -87138965 - L1_Mus2 LINE L1 -419 6147 5977 5 709 3369 143 82 34 chr15 16356009 16356990 -87137984 + RLTR13D1 LTR ERVK 1 1023 0 5 709 3110 69 0 0 chr15 16356990 16357441 -87137533 - L1_Mus2 LINE L1 -584 5982 5532 5 709 22 70 0 0 chr15 16357741 16357784 -87137190 + AT_rich Low_complexity Low_complexity 1 43 0 5 709 30 77 0 0 chr15 16357814 16357879 -87137095 + AT_rich Low_complexity Low_complexity 1 65 0 5 709 1873 245 35 41 chr15 16358744 16359385 -87135589 - Lx9 LINE L1 -1637 6007 5328 5 709 871 269 44 10 chr15 16359448 16359741 -87135233 - L1M3 LINE L1 -1043 5097 4795 5 709 230 0 33 0 chr15 16359755 16359785 -87135189 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 709 236 239 112 11 chr15 16360462 16360551 -87134423 + L1M3 LINE L1 5658 5755 -434 5 709 22 0 0 0 chr15 16360826 16360848 -87134126 + AT_rich Low_complexity Low_complexity 1 22 0 5 709 270 0 0 0 chr15 16361278 16361308 -87133666 + (TTA)n Simple_repeat Simple_repeat 3 32 0 5 709 501 185 311 0 chr15 16361321 16361456 -87133518 + RMER6C LTR ERVK 1 177 -513 5 709 1468 179 39 3 chr15 16361492 16361777 -87133197 + RMER6C LTR ERVK 396 690 0 5 709 26 0 0 0 chr15 16362041 16362067 -87132907 + AT_rich Low_complexity Low_complexity 1 26 0 5 709 737 340 76 14 chr15 16363114 16363469 -87131505 + MTEa LTR MaLR 1 377 -2 5 709 369 0 0 0 chr15 16363715 16363756 -87131218 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 709 354 23 0 0 chr15 16363756 16363798 -87131176 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 709 234 242 0 43 chr15 16363901 16363970 -87131004 + CT-rich Low_complexity Low_complexity 2 67 0 5 709 3547 179 180 23 chr15 16365105 16365890 -87129084 - RMER13B LTR ERVK 0 908 1 5 709 381 326 51 22 chr15 16366370 16366508 -87128466 + ID_B1 SINE B4 83 224 0 5 709 22 70 0 0 chr15 16366950 16366993 -87127981 + AT_rich Low_complexity Low_complexity 1 43 0 5 709 231 167 0 0 chr15 16367546 16367588 -87127386 + (CAT)n Simple_repeat Simple_repeat 1 42 0 5 709 201 108 0 0 chr15 16367656 16367693 -87127281 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 5 709 1960 218 144 11 chr15 16367693 16368235 -87126739 + Lx9 LINE L1 6870 7483 -161 5 709 422 101 14 0 chr15 16368237 16368306 -87126668 + (TG)n Simple_repeat Simple_repeat 1 70 0 5 709 1420 285 69 76 chr15 16368344 16368895 -87126079 + Lx6 LINE L1 6904 7450 -10 5 709 36 62 0 0 chr15 16369004 16369068 -87125906 + AT_rich Low_complexity Low_complexity 1 64 0 5 709 24 32 0 0 chr15 16369578 16369609 -87125365 + AT_rich Low_complexity Low_complexity 1 31 0 5 709 303 28 0 0 chr15 16369891 16369927 -87125047 + (TTG)n Simple_repeat Simple_repeat 2 37 0 5 709 726 96 0 0 chr15 16369972 16370076 -87124898 + (TG)n Simple_repeat Simple_repeat 1 104 0 5 709 265 297 131 15 chr15 16371396 16371526 -87123448 - B1_Mur4 SINE Alu -5 145 1 5 709 1437 186 44 66 chr15 16373503 16373865 -87121109 - Lx3A LINE L1 0 6981 6628 5 709 365 265 28 64 chr15 16374140 16374281 -87120693 - Lx8 LINE L1 -189 7284 7149 5 709 29 78 0 0 chr15 16374860 16374924 -87120050 + AT_rich Low_complexity Low_complexity 1 64 0 5 709 28 61 0 0 chr15 16376058 16376107 -87118867 + AT_rich Low_complexity Low_complexity 1 49 0 5 709 270 293 88 57 chr15 16376171 16376202 -87118772 + Lx9 LINE L1 7201 7234 -410 5 709 279 0 0 0 chr15 16376202 16376233 -87118741 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 709 270 293 88 57 chr15 16376233 16376360 -87118614 + Lx9 LINE L1 7235 7364 -280 5 709 255 274 12 0 chr15 16376894 16376978 -87117996 + Lx9 LINE L1 7352 7436 -208 5 709 570 35 23 12 chr15 16377067 16377153 -87117821 + (TAGA)n Simple_repeat Simple_repeat 3 89 0 5 709 263 28 28 0 chr15 16377160 16377196 -87117778 + (CATA)n Simple_repeat Simple_repeat 3 39 0 5 709 21 36 0 0 chr15 16377278 16377306 -87117668 + AT_rich Low_complexity Low_complexity 1 28 0 5 709 627 323 36 15 chr15 16377567 16377762 -87117212 - B3 SINE B2 -10 206 8 5 709 34 55 0 0 chr15 16377907 16377962 -87117012 + AT_rich Low_complexity Low_complexity 1 55 0 5 709 29 0 0 0 chr15 16378494 16378523 -87116451 + AT_rich Low_complexity Low_complexity 1 29 0 5 709 1889 212 101 28 chr15 16378673 16379167 -87115807 + Lx3C LINE L1 6445 6974 -2 5 709 292 175 0 45 chr15 16379789 16379855 -87115119 - ORR1C2 LTR MaLR -232 152 90 5 709 1641 21 0 0 chr15 16379930 16380118 -87114856 - B2_Mm1a SINE B2 -4 189 2 5 709 404 298 11 27 chr15 16381105 16381288 -87113686 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 709 312 228 14 7 chr15 16381300 16381446 -87113528 + (CA)n Simple_repeat Simple_repeat 2 148 0 5 709 303 28 0 0 chr15 16381621 16381657 -87113317 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 5 709 37 76 0 0 chr15 16381785 16381864 -87113110 + AT_rich Low_complexity Low_complexity 1 79 0 5 709 457 172 35 73 chr15 16382157 16382332 -87112642 - L1_Mm LINE L1 -3728 2155 1979 5 709 2596 126 39 43 chr15 16382432 16382914 -87112060 - Lx LINE L1 -803 5851 5364 5 709 353 22 22 0 chr15 16383139 16383185 -87111789 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 709 315 122 0 0 chr15 16383185 16383233 -87111741 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 710 244 319 77 53 chr15 16384237 16384253 -87110721 - Lx8 LINE L1 -153 7320 7306 5 710 447 19 0 0 chr15 16384253 16384305 -87110669 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 710 244 319 77 53 chr15 16384305 16384457 -87110517 - Lx8 LINE L1 -168 7305 7148 5 710 6002 46 3 11 chr15 16384625 16385375 -87109599 - IAPEz-int LTR ERVK -2 6479 5736 5 710 2033 97 0 0 chr15 16385374 16385652 -87109322 - IAPEz-int LTR ERVK -4845 1636 1359 5 710 3450 54 25 16 chr15 16385652 16386218 -87108756 - IAPEz-int LTR ERVK -5819 662 168 5 710 230 315 0 0 chr15 16386218 16386272 -87108702 - RLTR27 LTR ERVK -34 275 222 5 710 1064 102 11 33 chr15 16386272 16386454 -87108520 - IAPEz-int LTR ERVK -6287 194 17 5 710 292 82 77 64 chr15 16386552 16386630 -87108344 - IAPEz-int LTR ERVK -1906 81 3 5 710 2190 129 86 67 chr15 16386632 16387098 -87107876 - IAPLTR2_Mm LTR ERVK 0 475 1 5 710 1678 120 36 4 chr15 16387109 16387384 -87107590 - L1_Mus4 LINE L1 -7 6629 6346 5 710 711 332 70 35 chr15 16387385 16387782 -87107192 - Lx9 LINE L1 -496 7148 6738 5 710 218 292 11 22 chr15 16389592 16389683 -87105291 + (CATATA)n Simple_repeat Simple_repeat 3 92 0 5 710 374 169 0 24 chr15 16389769 16389854 -87105120 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 5 710 445 85 85 0 chr15 16389870 16389976 -87104998 + (CAGAGA)n Simple_repeat Simple_repeat 6 120 0 5 710 2138 163 7 146 chr15 16390095 16390671 -87104303 - L1_Mur2 LINE L1 -1042 4835 4340 5 710 5446 130 45 3 chr15 16390673 16391540 -87103434 + Lx3A LINE L1 6077 6979 -2 5 710 183 80 0 0 chr15 16391561 16391586 -87103388 + (A)n Simple_repeat Simple_repeat 1 25 0 5 710 2950 95 2 0 chr15 16392019 16392418 -87102556 - MTB LTR MaLR 0 400 1 5 710 7100 97 8 70 chr15 16392418 16393589 -87101385 - MTB-int LTR MaLR 0 1098 1 5 710 2894 93 8 0 chr15 16393589 16393986 -87100988 - MTB LTR MaLR 0 400 1 5 710 377 130 0 13 chr15 16394186 16394202 -87100772 + (TA)n Simple_repeat Simple_repeat 2 17 0 6 710 4424 10 2 0 chr15 16394202 16394694 -87100280 + MT2_Mm LTR ERVL 1 493 0 6 710 377 130 0 13 chr15 16394694 16394755 -87100219 + (TA)n Simple_repeat Simple_repeat 2 61 0 6 710 287 299 74 9 chr15 16396212 16396320 -87098654 - Tigger5 DNA MER2_type -1 2405 2291 6 710 441 0 0 0 chr15 16396573 16396622 -87098352 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 710 216 0 0 0 chr15 16396665 16396689 -87098285 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 710 1058 83 0 14 chr15 16396689 16396826 -87098148 - B1_Mus2 SINE Alu -10 137 1 6 710 25 0 0 0 chr15 16397137 16397162 -87097812 + AT_rich Low_complexity Low_complexity 1 25 0 6 710 5378 64 3 1 chr15 16398079 16398770 -87096204 - L1_Mus2 LINE L1 0 6566 5875 6 710 237 33 0 0 chr15 16398955 16398985 -87095989 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 710 608 161 7 0 chr15 16398985 16399128 -87095846 + GA-rich Low_complexity Low_complexity 1 144 0 6 710 327 113 0 0 chr15 16399289 16399342 -87095632 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 710 1811 85 8 0 chr15 16400021 16400267 -87094707 + L1_Mus1 LINE L1 6320 6567 0 6 710 282 355 24 24 chr15 16400452 16400579 -87094395 + B1_Mur1 SINE Alu 23 149 0 6 710 266 374 30 8 chr15 16401112 16401244 -87093730 - B1F1 SINE Alu -8 141 7 6 710 3770 131 5 17 chr15 16401444 16402043 -87092931 - Lx2 LINE L1 -1 6996 6405 6 710 295 267 55 94 chr15 16402452 16402580 -87092394 + RMER20B LTR ERVK 476 598 -29 6 710 405 0 0 0 chr15 16402598 16402643 -87092331 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 710 987 238 71 86 chr15 16402644 16402970 -87092004 - MT2A LTR ERVL -109 424 104 6 710 261 83 0 0 chr15 16402970 16403006 -87091968 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 6 710 247 333 17 138 chr15 16403006 16403040 -87091934 - MT2B LTR ERVL -334 267 234 6 710 3648 206 45 13 chr15 16403042 16403803 -87091171 - Lx4B LINE L1 -48 7010 6226 6 710 3733 162 1 2 chr15 16403804 16404681 -87090293 - Lx4B LINE L1 -585 6069 5193 6 710 5755 155 120 3 chr15 16404678 16405822 -87089152 + Lx4B LINE L1 3908 5185 -692 6 710 3331 169 16 11 chr15 16405820 16406675 -87088299 + Lx4B LINE L1 5317 6185 -873 6 710 361 253 12 0 chr15 16406700 16406783 -87088191 - MT2A LTR ERVL -447 86 3 6 710 304 360 70 52 chr15 16406888 16407404 -87087570 - L1MB5 LINE L1 -156 6018 5494 6 710 468 237 25 0 chr15 16407434 16407552 -87087422 - Lx9 LINE L1 -241 7403 7283 6 710 920 263 154 9 chr15 16407564 16407902 -87087072 + Lx9 LINE L1 6873 7259 -385 6 710 204 125 20 40 chr15 16407939 16407989 -87086985 + (TA)n Simple_repeat Simple_repeat 2 50 0 6 710 254 395 71 34 chr15 16408216 16408541 -87086433 + L4 LINE RTE 1208 1544 -485 6 710 3270 135 68 0 chr15 16410089 16410621 -87084353 - Lx3B LINE L1 -200 6773 6206 6 710 889 200 29 0 chr15 16410621 16410796 -87084178 + Lx3B LINE L1 6791 6970 -3 6 710 378 61 0 0 chr15 16410801 16410850 -87084124 + (TAA)n Simple_repeat Simple_repeat 2 50 0 6 710 39 74 0 0 chr15 16411017 16411098 -87083876 + AT_rich Low_complexity Low_complexity 1 81 0 6 710 21 0 0 0 chr15 16411471 16411492 -87083482 + AT_rich Low_complexity Low_complexity 1 21 0 6 710 23 0 0 0 chr15 16413407 16413430 -87081544 + AT_rich Low_complexity Low_complexity 1 23 0 6 710 1113 79 0 0 chr15 16413819 16413983 -87080991 + L1_Mm LINE L1 1314 1477 -4406 6 710 23 0 0 0 chr15 16414007 16414030 -87080944 + AT_rich Low_complexity Low_complexity 1 23 0 6 710 608 119 8 106 chr15 16414228 16414463 -87080511 + RMER17D LTR ERVK 287 498 -391 6 710 1637 266 108 36 chr15 16414861 16415503 -87079471 - RMER6C LTR ERVK -2 688 1 6 710 372 309 36 14 chr15 16415910 16416048 -87078926 - B1_Mus2 SINE Alu -2 145 5 6 710 1508 192 153 5 chr15 16416277 16416565 -87078409 + L1VL2 LINE L1 472 815 -5520 6 710 1161 58 0 0 chr15 16416565 16416704 -87078270 + B1_Mm SINE Alu 1 139 -8 6 710 265 24 23 23 chr15 16416704 16416747 -87078227 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 6 710 1508 188 156 3 chr15 16416747 16416895 -87078079 + L1VL2 LINE L1 816 962 -5373 6 710 1197 154 25 42 chr15 16416894 16417131 -87077843 + MusHAL1 LINE L1 467 699 -2013 6 710 1718 118 44 0 chr15 16417125 16417174 -87077800 - L1_Mur1 LINE L1 -2639 3247 3194 6 710 180 0 0 0 chr15 16417174 16417194 -87077780 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 710 1718 118 44 0 chr15 16417194 16417441 -87077533 - L1_Mur1 LINE L1 -2693 3193 2939 6 710 2182 136 65 12 chr15 16417758 16418159 -87076815 - BGLII_Mus LTR ERVK 0 422 1 6 710 1944 141 21 88 chr15 16418217 16418605 -87076369 - RLTR1B LTR ERV1 0 512 151 6 710 513 262 28 21 chr15 16418769 16418913 -87076061 + MTD LTR MaLR 66 210 -209 6 710 3414 269 144 16 chr15 16418913 16420263 -87074711 + Lx7 LINE L1 5742 7264 -432 6 710 1005 169 42 5 chr15 16420261 16420451 -87074523 + Lx4B LINE L1 6276 6472 -586 6 710 267 103 0 0 chr15 16421700 16421739 -87073235 + (A)n Simple_repeat Simple_repeat 1 39 0 6 710 1435 239 57 87 chr15 16422386 16423038 -87071936 + RMER6C LTR ERVK 3 634 -56 6 710 511 167 0 0 chr15 16423040 16423118 -87071856 - Lx2 LINE L1 -195 6802 6725 6 710 2055 125 13 7 chr15 16423399 16423706 -87071268 + RLTR27 LTR ERVK 1 309 0 6 710 25 0 0 0 chr15 16425642 16425667 -87069307 + AT_rich Low_complexity Low_complexity 1 25 0 6 710 341 0 0 43 chr15 16426138 16426184 -87068790 + (TAAAA)n Simple_repeat Simple_repeat 5 48 0 6 710 1160 238 109 63 chr15 16426329 16426696 -87068278 + ORR1C2 LTR MaLR 1 384 0 6 710 23 68 0 0 chr15 16427846 16427890 -87067084 + AT_rich Low_complexity Low_complexity 1 44 0 6 710 372 236 13 2 chr15 16429632 16429735 -87065239 - MTD LTR MaLR -292 104 1 6 710 279 0 0 0 chr15 16430477 16430508 -87064466 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 710 1238 39 0 0 chr15 16430518 16430673 -87064301 - B2_Mm2 SINE B2 -40 155 1 6 710 1155 112 0 0 chr15 16431218 16431397 -87063577 + (CA)n Simple_repeat Simple_repeat 2 180 0 6 710 1062 227 34 85 chr15 16431673 16431769 -87063205 + RLTR12A LTR ERVK 37 131 -437 6 710 3035 123 29 4 chr15 16431769 16432252 -87062722 + Lx LINE L1 6160 6654 0 6 710 1062 227 34 85 chr15 16432252 16432449 -87062525 + RLTR12A LTR ERVK 132 315 -253 6 710 188 182 23 0 chr15 16432449 16432493 -87062481 + GA-rich Low_complexity Low_complexity 1 45 0 6 710 1188 248 34 20 chr15 16432499 16432857 -87062117 + RLTR12A LTR ERVK 202 564 -4 6 710 512 279 7 22 chr15 16432886 16433025 -87061949 - B3 SINE B2 -78 138 2 6 710 1064 234 50 33 chr15 16433244 16433607 -87061367 - Lx7 LINE L1 0 7696 7328 6 710 4924 120 3 8 chr15 16433730 16434462 -87060512 - L1_Mus4 LINE L1 -1 6635 5908 6 710 1592 232 18 9 chr15 16434462 16434801 -87060173 - Lx6 LINE L1 -948 6512 6171 6 710 1988 111 16 12 chr15 16434809 16435128 -87059846 + Lx3B LINE L1 6635 6954 -19 6 710 26 0 0 0 chr15 16435133 16435159 -87059815 + AT_rich Low_complexity Low_complexity 1 26 0 6 710 396 332 294 24 chr15 16435503 16435880 -87059094 + Lx8 LINE L1 6258 6735 -738 6 710 185 210 0 58 chr15 16437014 16437100 -87057874 + CT-rich Low_complexity Low_complexity 4 84 0 6 710 1040 98 6 0 chr15 16437103 16437267 -87057707 + (TCTA)n Simple_repeat Simple_repeat 2 166 0 6 710 30698 63 2 3 chr15 16437290 16440603 -87054371 - L1Md_F2 LINE L1 -1 6581 3280 6 710 1356 61 66 0 chr15 16440603 16440623 -87054351 - B2_Mm1a SINE B2 0 193 174 6 710 414 0 0 0 chr15 16440623 16440669 -87054305 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 6 710 1356 61 66 0 chr15 16440669 16440829 -87054145 - B2_Mm1a SINE B2 -20 173 2 6 710 30698 71 1 4 chr15 16440829 16442296 -87052678 - L1Md_F2 LINE L1 -2604 3279 1810 6 710 570 29 0 0 chr15 16442296 16442364 -87052610 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 6 710 3210 103 36 0 chr15 16442374 16442840 -87052134 - L1_Mus1 LINE L1 -2 6565 6083 6 710 1173 35 0 0 chr15 16442841 16442982 -87051992 + L1_Mus1 LINE L1 5812 5952 -615 6 710 570 234 9 0 chr15 16443371 16443478 -87051496 - ETnERV2-int LTR ERVK -205 7201 7094 6 710 803 136 13 0 chr15 16443481 16443628 -87051346 + L1_Mus1 LINE L1 5923 6074 -493 6 710 241 364 30 10 chr15 16443640 16443740 -87051234 - B1F SINE Alu -47 102 1 6 710 405 342 121 0 chr15 16443810 16443959 -87051015 + ORR1D2 LTR MaLR 73 239 -131 6 710 240 290 0 0 chr15 16444267 16444336 -87050638 + (TG)n Simple_repeat Simple_repeat 2 70 0 6 710 27 73 0 0 chr15 16444806 16444861 -87050113 + AT_rich Low_complexity Low_complexity 1 55 0 6 710 438 329 13 75 chr15 16445131 16445358 -87049616 + L2 LINE L2 2434 2646 -773 6 710 615 317 57 38 chr15 16445479 16445689 -87049285 - B3A SINE B2 -1 215 2 6 710 265 254 0 0 chr15 16445775 16445830 -87049144 + B1_Mm SINE Alu 73 127 -20 6 710 264 292 14 0 chr15 16445891 16445963 -87049011 - MT2A LTR ERVL -460 73 1 6 710 24 0 0 0 chr15 16445994 16446018 -87048956 + AT_rich Low_complexity Low_complexity 1 24 0 6 710 295 209 98 23 chr15 16446277 16446409 -87048565 + Lx9 LINE L1 7503 7644 0 6 710 364 385 51 71 chr15 16447578 16447874 -87047100 - B4A SINE B4 0 292 3 6 710 180 355 31 106 chr15 16447951 16448178 -87046796 + L3 LINE CR1 952 1161 -3328 6 710 27 0 0 0 chr15 16448206 16448233 -87046741 + AT_rich Low_complexity Low_complexity 1 27 0 6 710 23 0 0 0 chr15 16448631 16448654 -87046320 + AT_rich Low_complexity Low_complexity 1 23 0 6 710 21 57 0 0 chr15 16448771 16448806 -87046168 + AT_rich Low_complexity Low_complexity 1 35 0 6 710 257 214 0 35 chr15 16449603 16449661 -87045313 + (CATA)n Simple_repeat Simple_repeat 1 56 0 6 710 206 289 0 0 chr15 16451078 16451123 -87043851 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 710 189 121 0 0 chr15 16452177 16452210 -87042764 + (ATG)n Simple_repeat Simple_repeat 2 34 0 6 710 382 302 33 25 chr15 16453131 16453253 -87041721 - RSINE1 SINE B4 -29 136 14 6 710 22 0 0 0 chr15 16453669 16453691 -87041283 + AT_rich Low_complexity Low_complexity 1 22 0 6 710 3109 214 116 18 chr15 16454254 16455168 -87039806 + Lx2B LINE L1 5987 6990 -10 7 710 886 307 91 27 chr15 16455585 16455902 -87039072 + Lx7 LINE L1 6907 7244 -452 7 710 2563 103 28 3 chr15 16455902 16456292 -87038682 - MTB LTR MaLR 0 400 1 7 710 886 307 91 27 chr15 16456292 16456526 -87038448 + Lx7 LINE L1 7245 7493 -203 7 710 246 231 31 0 chr15 16456568 16456633 -87038341 + Lx7 LINE L1 7612 7678 -18 7 710 493 332 29 7 chr15 16456660 16456936 -87038038 + L1M2 LINE L1 5531 5812 -488 7 710 255 254 0 0 chr15 16457974 16458033 -87036941 + (TA)n Simple_repeat Simple_repeat 2 60 0 7 710 469 367 19 85 chr15 16458169 16458428 -87036546 + B4A SINE B4 7 248 -44 7 710 417 70 0 0 chr15 16458492 16458549 -87036425 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 710 318 283 17 17 chr15 16461265 16461380 -87033594 - L1MC3 LINE L1 -188 7597 7483 7 710 521 240 73 8 chr15 16461397 16461569 -87033405 - ORR1C2 LTR MaLR -190 180 1 7 710 2689 233 75 37 chr15 16461656 16462548 -87032426 - RMER1B Other Other 0 1066 152 7 710 435 315 46 20 chr15 16462526 16462734 -87032240 - RMER1B Other Other -726 340 166 7 710 1024 106 0 0 chr15 16462990 16463131 -87031843 - B1_Mus1 SINE Alu -6 142 2 7 710 22 0 0 0 chr15 16463970 16463992 -87030982 + AT_rich Low_complexity Low_complexity 1 22 0 7 710 30 0 0 0 chr15 16464054 16464084 -87030890 + AT_rich Low_complexity Low_complexity 1 30 0 7 710 358 307 101 18 chr15 16465875 16466044 -87028930 - Lx7 LINE L1 -378 7318 7136 7 710 210 150 0 0 chr15 16466054 16466094 -87028880 + (TCC)n Simple_repeat Simple_repeat 1 40 0 7 710 275 275 89 27 chr15 16466094 16466240 -87028734 - Lx7 LINE L1 -676 7020 6866 7 710 342 45 0 0 chr15 16466705 16466749 -87028225 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 710 288 0 0 0 chr15 16466750 16466782 -87028192 + (GA)n Simple_repeat Simple_repeat 1 32 0 7 710 2389 210 27 4 chr15 16467394 16467877 -87027097 - Lx4B LINE L1 -286 6772 6279 7 710 1501 91 29 0 chr15 16468365 16468574 -87026400 - L1Md_F2 LINE L1 -327 6255 6041 7 710 2259 90 19 0 chr15 16468574 16468895 -87026079 + L1_Mus1 LINE L1 6241 6567 0 7 710 379 0 19 19 chr15 16469335 16469387 -87025587 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 7 710 191 61 30 0 chr15 16470340 16470373 -87024601 + (TTTTTG)n Simple_repeat Simple_repeat 5 38 0 7 710 417 323 17 69 chr15 16472054 16472227 -87022747 + B3A SINE B2 35 198 0 7 710 21 36 0 0 chr15 16472279 16472307 -87022667 + AT_rich Low_complexity Low_complexity 1 28 0 7 710 216 184 0 0 chr15 16473074 16473123 -87021851 + (TA)n Simple_repeat Simple_repeat 2 50 0 7 710 306 0 0 0 chr15 16473130 16473164 -87021810 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 710 507 33 0 0 chr15 16473164 16473224 -87021750 + (GA)n Simple_repeat Simple_repeat 2 62 0 7 710 365 239 43 17 chr15 16473240 16473355 -87021619 + RMER1B Other Other 943 1060 -6 7 710 22 80 0 0 chr15 16473355 16473405 -87021569 + AT_rich Low_complexity Low_complexity 1 50 0 7 710 1079 319 39 53 chr15 16474139 16474276 -87020698 - Lx8 LINE L1 -2 7471 7339 7 710 882 157 78 6 chr15 16474276 16474456 -87020518 - B2_Mm2 SINE B2 -1 194 2 7 710 1079 319 39 53 chr15 16474456 16474474 -87020500 - Lx8 LINE L1 -135 7338 7324 7 710 407 35 18 0 chr15 16474474 16474531 -87020443 + (CA)n Simple_repeat Simple_repeat 2 59 0 7 710 1079 319 39 53 chr15 16474531 16475036 -87019938 - Lx8 LINE L1 -150 7323 6819 7 710 332 321 94 45 chr15 16475038 16475240 -87019734 + RLTR9C LTR ERVK 182 393 0 7 710 327 270 70 35 chr15 16475472 16475587 -87019387 + 5S rRNA rRNA 1 119 -2 7 710 22 56 0 0 chr15 16475653 16475689 -87019285 + AT_rich Low_complexity Low_complexity 1 36 0 7 710 368 326 72 22 chr15 16475703 16475841 -87019133 + RSINE1 SINE B4 19 163 -2 7 710 326 308 48 27 chr15 16476123 16476310 -87018664 - L1MA8 LINE L1 -270 6021 5831 7 710 201 341 43 21 chr15 16476788 16476881 -87018093 + MIR SINE MIR 111 205 -57 7 710 2930 220 46 12 chr15 16477095 16477835 -87017139 - RMER1B Other Other -4 1062 225 7 710 2120 259 48 88 chr15 16477856 16478605 -87016369 + Lx6 LINE L1 6475 7193 -267 7 710 560 214 30 132 chr15 16478916 16479153 -87015821 - Lx7 LINE L1 -16 7680 7328 7 710 243 0 0 0 chr15 16480147 16480174 -87014800 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 710 929 78 6 50 chr15 16480392 16480553 -87014421 + L1Md_F2 LINE L1 6429 6582 0 7 710 320 123 0 14 chr15 16480773 16480847 -87014127 + (TTTTG)n Simple_repeat Simple_repeat 2 74 0 7 710 436 306 30 43 chr15 16481013 16481177 -87013797 - ORR1D2 LTR MaLR -208 162 1 7 710 1979 307 55 19 chr15 16481177 16481797 -87013177 + Lx8 LINE L1 3736 4380 -1500 7 710 423 0 0 0 chr15 16481797 16481844 -87013130 + (TA)n Simple_repeat Simple_repeat 2 48 0 7 710 405 0 0 0 chr15 16481844 16481888 -87013086 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 710 1979 307 55 19 chr15 16481888 16482334 -87012640 + Lx8 LINE L1 4381 4841 -1039 7 710 640 319 111 43 chr15 16482369 16483152 -87011822 + Lx8 LINE L1 5085 5943 -369 7 710 2030 322 65 22 chr15 16483405 16484321 -87010653 + Lx8 LINE L1 6214 7169 -304 7 710 338 262 132 14 chr15 16484649 16484763 -87010211 - B1_Mur3 SINE Alu 0 120 1 7 710 22 35 0 0 chr15 16484789 16484818 -87010156 + AT_rich Low_complexity Low_complexity 1 29 0 7 710 750 87 0 8 chr15 16485180 16485307 -87009667 + L1_Mus4 LINE L1 6509 6634 -2 7 710 504 93 0 0 chr15 16486558 16486633 -87008341 + (TG)n Simple_repeat Simple_repeat 1 75 0 7 710 264 336 103 28 chr15 16486645 16486752 -87008222 - RSINE1 SINE B4 -48 117 3 7 710 198 0 0 0 chr15 16487256 16487278 -87007696 + (A)n Simple_repeat Simple_repeat 1 22 0 7 710 35 41 0 0 chr15 16487287 16487336 -87007638 + AT_rich Low_complexity Low_complexity 1 49 0 7 710 266 333 90 0 chr15 16487399 16487477 -87007497 - MTE2a LTR MaLR -143 236 152 7 710 510 67 0 0 chr15 16488245 16488320 -87006654 + (CAGAGA)n Simple_repeat Simple_repeat 2 76 0 7 710 340 327 43 12 chr15 16488325 16488486 -87006488 - MTE2a LTR MaLR -13 366 201 7 710 30 27 0 0 chr15 16488554 16488591 -87006383 + AT_rich Low_complexity Low_complexity 1 37 0 7 710 445 248 0 54 chr15 16489469 16489580 -87005394 - RLTR20B3 LTR ERVK 0 577 473 7 710 552 98 0 0 chr15 16489581 16489663 -87005311 - L1_Mm LINE L1 -4379 1504 1423 7 710 5427 60 66 0 chr15 16489663 16490390 -87004584 + L1Md_F2 LINE L1 5805 6579 -3 7 710 666 0 0 0 chr15 16490393 16490467 -87004507 + (GAAA)n Simple_repeat Simple_repeat 2 75 0 7 710 3064 52 8 0 chr15 16490467 16490850 -87004124 + L1_Mm LINE L1 5249 5634 -249 7 710 2311 73 13 0 chr15 16490863 16491178 -87003796 - L1_Mm LINE L1 -505 5378 5060 7 710 6333 86 9 7 chr15 16491171 16492084 -87002890 + L1_Mm LINE L1 4402 5316 -567 7 710 1099 212 45 11 chr15 16492084 16492370 -87002604 - RMER12B LTR ERVK -942 462 167 7 710 5221 70 7 4 chr15 16492440 16493129 -87001845 - L1Md_F2 LINE L1 -15 6567 5877 7 710 1350 63 0 0 chr15 16493129 16493303 -87001671 + L1_Mm LINE L1 4055 4228 -1655 7 710 21 0 0 0 chr15 16494974 16494995 -86999979 + AT_rich Low_complexity Low_complexity 1 21 0 7 710 22 0 0 0 chr15 16495461 16495483 -86999491 + AT_rich Low_complexity Low_complexity 1 22 0 7 710 6368 124 13 8 chr15 16496604 16496943 -86998031 + Lx3B LINE L1 4898 5237 -649 7 710 210 37 0 0 chr15 16496943 16496970 -86998004 + (TA)n Simple_repeat Simple_repeat 1 27 0 7 710 6842 140 59 17 chr15 16496970 16498611 -86996363 + Lx3B LINE L1 5238 6972 -1 7 710 198 0 0 0 chr15 16499780 16499802 -86995172 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 7 710 366 23 0 0 chr15 16499839 16499882 -86995092 + (TA)n Simple_repeat Simple_repeat 2 44 0 7 710 282 21 20 41 chr15 16500125 16500174 -86994800 + (TAA)n Simple_repeat Simple_repeat 2 49 0 1 710 462 308 97 13 chr15 16500389 16500616 -86994358 + Lx7 LINE L1 6914 7159 -537 2 710 186 191 0 0 chr15 16501001 16501043 -86993931 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 710 438 69 0 0 chr15 16501052 16501110 -86993864 + (GA)n Simple_repeat Simple_repeat 1 58 0 4 710 1604 230 40 15 chr15 16501534 16501931 -86993043 - MTB_Mm LTR MaLR 0 407 1 5 710 4723 181 18 9 chr15 16502885 16503729 -86991245 - Lx4B LINE L1 -30 7028 6178 6 710 387 203 0 4 chr15 16503716 16503794 -86991180 - L1_Mur2 LINE L1 -362 5521 5446 7 710 206 263 0 17 chr15 16504025 16504083 -86990891 + A-rich Low_complexity Low_complexity 2 58 0 8 710 793 194 0 0 chr15 16505481 16505636 -86989338 - L1_Mur2 LINE L1 -433 5444 5290 7 710 767 180 136 23 chr15 16505642 16505818 -86989156 - L1_Mur2 LINE L1 -6174 912 717 7 710 21 95 0 0 chr15 16507155 16507218 -86987756 + AT_rich Low_complexity Low_complexity 1 63 0 9 710 205 140 50 50 chr15 16507475 16507535 -86987439 + T-rich Low_complexity Low_complexity 6 65 0 1 710 6205 206 34 27 chr15 16507538 16509205 -86985769 - Lx4B LINE L1 -8 7050 5359 1 710 4933 134 50 13 chr15 16509246 16510068 -86984906 - Lx LINE L1 -5 6649 5798 1 710 1017 108 0 7 chr15 16510424 16510573 -86984401 - B1_Mus1 SINE Alu 0 148 1 1 710 709 296 59 16 chr15 16510623 16511031 -86983943 + RLTR18B LTR ERVK 1 509 -3 1 710 230 328 45 15 chr15 16512412 16512545 -86982429 + MLT2C1 LTR ERVL 16 152 -245 1 710 22 0 0 0 chr15 16513684 16513706 -86981268 + AT_rich Low_complexity Low_complexity 1 22 0 1 711 9959 69 8 4 chr15 16515456 16517472 -86977502 - L1Md_F2 LINE L1 -1 6581 4557 1 711 2605 60 3 0 chr15 16517471 16517805 -86977169 + L1Md_F2 LINE L1 5808 6142 -440 1 711 3532 62 9 0 chr15 16517798 16518263 -86976711 - L1Md_F2 LINE L1 -1320 4563 4095 1 711 421 378 61 26 chr15 16518305 16518440 -86976534 + MLT1A1 LTR MaLR 4 139 -269 1 711 788 103 8 16 chr15 16518440 16518568 -86976406 - L1_Mus2 LINE L1 0 6566 6440 2 711 421 378 61 26 chr15 16518568 16518777 -86976197 + MLT1A1 LTR MaLR 140 359 -49 1 711 213 271 17 0 chr15 16519465 16519524 -86975450 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 711 295 351 118 68 chr15 16519528 16519791 -86975183 - B4 SINE B4 -6 286 11 2 711 227 133 0 22 chr15 16520195 16520241 -86974733 + CT-rich Low_complexity Low_complexity 3 47 0 2 711 914 343 118 35 chr15 16520686 16521333 -86973641 - Lx8 LINE L1 -343 7130 6431 2 711 313 340 143 54 chr15 16521594 16521930 -86973044 - MTEa LTR MaLR 0 379 14 2 711 27 49 0 0 chr15 16522172 16522213 -86972761 + AT_rich Low_complexity Low_complexity 1 41 0 2 711 216 320 13 0 chr15 16522235 16522310 -86972664 + PB1D10 SINE Alu 24 99 -18 2 711 611 227 90 8 chr15 16524008 16524141 -86970833 - B1_Mur2 SINE Alu 0 149 6 2 711 426 20 0 0 chr15 16524225 16524276 -86970698 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 711 228 205 0 0 chr15 16524493 16524532 -86970442 + MIRb SINE MIR 222 260 -8 3 711 428 271 7 54 chr15 16524601 16524749 -86970225 - B2_Mm2 SINE B2 -10 185 45 3 711 26 0 0 0 chr15 16526084 16526110 -86968864 + AT_rich Low_complexity Low_complexity 1 26 0 3 711 322 339 132 55 chr15 16526299 16526571 -86968403 - MER31A LTR ERV1 0 485 193 3 711 310 148 0 32 chr15 16530427 16530490 -86964484 - Lx8 LINE L1 -5 7468 7408 3 711 281 365 53 63 chr15 16530735 16530925 -86964049 - MTEb LTR MaLR -115 264 77 3 711 6882 140 26 48 chr15 16531627 16532867 -86962107 - Lx2 LINE L1 -2 6995 5784 3 711 2044 170 49 113 chr15 16532883 16533417 -86961557 - L1_Mus3 LINE L1 -6 6648 6165 3 711 4693 158 25 65 chr15 16533457 16534445 -86960529 - L1_Mm LINE L1 -90 5793 4845 3 711 25 75 0 0 chr15 16534463 16534516 -86960458 + AT_rich Low_complexity Low_complexity 1 53 0 3 711 48 85 0 0 chr15 16534549 16534667 -86960307 + AT_rich Low_complexity Low_complexity 1 118 0 4 711 44 63 0 0 chr15 16535327 16535406 -86959568 + AT_rich Low_complexity Low_complexity 1 79 0 4 711 32 43 0 0 chr15 16535975 16536021 -86958953 + AT_rich Low_complexity Low_complexity 1 46 0 4 711 216 102 20 39 chr15 16536684 16536735 -86958239 + GA-rich Low_complexity Low_complexity 5 54 0 4 711 485 285 0 28 chr15 16536773 16536914 -86958060 - Lx9 LINE L1 -435 7209 7073 4 711 742 246 72 54 chr15 16537527 16537880 -86957094 - RMER6A LTR ERVK -4 716 415 4 711 715 180 53 23 chr15 16537921 16538092 -86956882 - RMER6A LTR ERVK -326 394 219 4 711 235 226 0 36 chr15 16538105 16538160 -86956814 - RMER6A LTR ERVK -665 55 3 4 711 1588 193 29 3 chr15 16538198 16538546 -86956428 + RLTR15 LTR ERVK 1 357 -2 4 711 22 35 0 0 chr15 16538547 16538576 -86956398 + AT_rich Low_complexity Low_complexity 1 29 0 4 711 21 36 0 0 chr15 16538769 16538797 -86956177 + AT_rich Low_complexity Low_complexity 1 28 0 4 711 21 36 0 0 chr15 16539797 16539825 -86955149 + AT_rich Low_complexity Low_complexity 1 28 0 4 711 200 271 0 17 chr15 16540064 16540124 -86954850 + GA-rich Low_complexity Low_complexity 3 61 0 5 711 582 277 19 13 chr15 16540143 16540300 -86954674 - MTC LTR MaLR -2 419 262 5 711 2404 116 145 0 chr15 16541730 16542145 -86952829 + IAPLTR2_Mm LTR ERVK 1 475 0 5 711 301 133 120 0 chr15 16542147 16542222 -86952752 + IAPEz-int LTR ERVK 3 86 -1901 5 711 435 152 17 125 chr15 16542228 16542348 -86952626 + IAPEz-int LTR ERVK 17 123 -6358 5 711 227 267 0 0 chr15 16542348 16542393 -86952581 + RLTR27 LTR ERVK 231 275 -34 5 711 242 302 0 0 chr15 16542421 16542474 -86952500 + RLTR27 LTR ERVK 223 275 -34 5 711 3359 79 39 40 chr15 16542474 16543115 -86951859 + IAPEz-int LTR ERVK 168 662 -5819 5 711 2189 68 0 0 chr15 16543115 16543393 -86951581 + IAPEz-int LTR ERVK 1359 1636 -4845 5 711 5907 49 4 20 chr15 16543392 16544148 -86950826 + IAPEz-int LTR ERVK 5736 6479 -2 5 711 2400 114 125 5 chr15 16544150 16544574 -86950400 + IAPLTR2_Mm LTR ERVK 1 475 0 5 711 450 331 145 6 chr15 16545042 16545367 -86949607 - Lx8 LINE L1 -5 7468 7099 5 711 558 280 54 22 chr15 16545479 16545702 -86949272 - MERVL_2A-int LTR ERVL -4541 1173 944 5 711 584 329 63 31 chr15 16545730 16546258 -86948716 - MERVL_2A-int LTR ERVL -4990 771 184 5 711 399 336 81 84 chr15 16546860 16547302 -86947672 - MT2A LTR ERVL -92 441 1 5 711 2182 148 78 10 chr15 16548053 16548448 -86946526 + Lx3B LINE L1 6550 6971 -2 5 711 186 103 0 0 chr15 16548455 16548484 -86946490 + (TAA)n Simple_repeat Simple_repeat 2 30 0 5 711 194 108 0 51 chr15 16548821 16548860 -86946114 + (TATG)n Simple_repeat Simple_repeat 4 40 0 5 711 624 27 0 0 chr15 16548867 16548941 -86946033 + (TC)n Simple_repeat Simple_repeat 2 75 0 6 711 351 0 0 0 chr15 16548941 16548979 -86945995 + (TA)n Simple_repeat Simple_repeat 2 40 0 6 711 234 272 80 93 chr15 16549471 16549621 -86945353 + MLT1A LTR MaLR 208 355 -19 6 711 486 0 0 0 chr15 16550220 16550274 -86944700 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 711 1468 88 43 34 chr15 16550707 16550941 -86944033 + L1_Mus2 LINE L1 6331 6566 0 6 711 4307 81 117 8 chr15 16552284 16552932 -86942042 + L1_Mus3 LINE L1 5916 6634 -4 6 711 315 0 0 0 chr15 16553035 16553070 -86941904 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 6 711 348 404 30 55 chr15 16553968 16554133 -86940841 + B4A SINE B4 16 176 -116 6 711 486 0 0 0 chr15 16554138 16554192 -86940782 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 711 341 278 160 19 chr15 16554196 16554409 -86940565 + L1M2 LINE L1 3875 4117 -2026 6 711 284 85 0 41 chr15 16555567 16555616 -86939358 + (GGA)n Simple_repeat Simple_repeat 3 49 0 7 711 1009 281 108 61 chr15 16556468 16557064 -86937910 - ORR1D-int LTR MaLR -491 879 232 7 711 2519 195 41 14 chr15 16557077 16557587 -86937387 + Lx4A LINE L1 5317 5840 -46 7 711 14909 90 10 8 chr15 16557600 16559003 -86935971 + MuRRS4-int LTR ERV1 2370 3777 -1286 7 711 5310 120 31 59 chr15 16559003 16559280 -86935694 - RLTR13D6 LTR ERVK 0 902 657 7 711 1156 68 0 0 chr15 16559280 16559427 -86935547 + B1_Mus2 SINE Alu 1 147 0 7 711 5310 120 31 59 chr15 16559427 16560077 -86934897 - RLTR13D6 LTR ERVK -246 656 1 7 711 14909 242 30 31 chr15 16560077 16562658 -86932316 + MuRRS4-int LTR ERV1 3778 7353 -99 7 711 2297 132 54 7 chr15 16562659 16563065 -86931909 + LTRIS4 LTR ERV1 24 507 0 7 711 947 187 15 15 chr15 16563065 16563271 -86931703 + Lx4A LINE L1 5873 6078 -980 7 711 335 217 0 0 chr15 16563277 16563337 -86931637 - MTB LTR MaLR -6 394 335 7 711 722 106 10 0 chr15 16563323 16563427 -86931547 + B1_Mus1 SINE Alu 39 143 -5 7 711 847 0 19 0 chr15 16563430 16563533 -86931441 + (GAA)n Simple_repeat Simple_repeat 2 106 0 7 711 2507 103 3 0 chr15 16563538 16563889 -86931085 - MTB LTR MaLR -43 357 6 7 711 3019 244 63 20 chr15 16563898 16564767 -86930207 + Lx2B LINE L1 6077 6983 -17 7 711 1777 164 6 3 chr15 16564772 16565089 -86929885 - Lx LINE L1 0 6654 6337 8 711 3425 164 43 8 chr15 16565089 16565984 -86928990 + Lx2 LINE L1 5552 6532 -444 8 711 235 319 126 63 chr15 16568327 16568501 -86926473 + MTE2b LTR MaLR 191 375 -4 8 711 359 348 103 70 chr15 16568710 16568760 -86926214 + MLT1C LTR MaLR 46 95 -372 8 711 1003 75 0 135 chr15 16568760 16568930 -86926044 + B1_Mus1 SINE Alu 2 148 0 8 711 359 348 103 70 chr15 16568930 16569151 -86925823 + MLT1C LTR MaLR 96 326 -141 8 711 21 89 0 0 chr15 16569701 16569757 -86925217 + AT_rich Low_complexity Low_complexity 1 56 0 8 711 28 79 0 0 chr15 16571251 16571314 -86923660 + AT_rich Low_complexity Low_complexity 1 63 0 8 711 607 293 19 13 chr15 16571860 16572019 -86922955 - MER82 DNA MER2_type -1 652 493 8 711 239 284 104 59 chr15 16572207 16572342 -86922632 + MER89 LTR ERV1 235 375 -184 8 711 3828 60 62 0 chr15 16572358 16572862 -86922112 - L1_Mus1 LINE L1 0 6567 6033 8 711 1062 254 65 11 chr15 16573309 16573584 -86921390 + RMER15 LTR ERVL 173 462 -113 9 711 936 51 0 0 chr15 16573813 16573931 -86921043 + (TC)n Simple_repeat Simple_repeat 2 119 0 9 711 994 127 0 0 chr15 16573933 16574075 -86920899 - B1_Mus1 SINE Alu -6 142 1 9 711 365 287 66 42 chr15 16575928 16576095 -86918879 - Lx5 LINE L1 -1 7049 6879 9 711 1295 72 0 6 chr15 16576221 16576402 -86918572 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 9 711 312 53 65 13 chr15 16576662 16576739 -86918235 + (TTTTTG)n Simple_repeat Simple_repeat 3 83 0 9 711 683 276 38 84 chr15 16577535 16577772 -86917202 - MTEa LTR MaLR -46 333 108 9 711 351 189 94 10 chr15 16578016 16578112 -86916862 + RMER20B LTR ERVK 260 363 -264 9 711 195 42 0 0 chr15 16578254 16578278 -86916696 + (A)n Simple_repeat Simple_repeat 1 24 0 9 711 1840 214 42 137 chr15 16578352 16578964 -86916010 - Lx6 LINE L1 -352 7108 6555 9 711 1687 237 18 30 chr15 16578956 16579356 -86915618 + Lx6 LINE L1 6148 6542 -918 9 711 228 326 33 11 chr15 16579566 16579656 -86915318 + LTR48B LTR ERV1 41 132 -655 1 711 296 335 148 34 chr15 16580026 16580202 -86914772 + LTR48B LTR ERV1 429 624 -20 1 711 489 273 72 93 chr15 16580486 16580680 -86914294 - B3A SINE B2 -4 191 2 1 711 1109 123 6 0 chr15 16580738 16580917 -86914057 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1 711 285 75 0 0 chr15 16580917 16580957 -86914017 + (TTCTCC)n Simple_repeat Simple_repeat 6 45 0 1 711 311 107 26 26 chr15 16581010 16581087 -86913887 + (TA)n Simple_repeat Simple_repeat 1 77 0 1 711 243 0 0 0 chr15 16581119 16581146 -86913828 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 711 349 260 0 0 chr15 16581185 16581258 -86913716 - PB1D9 SINE Alu -43 77 5 1 711 1175 135 0 0 chr15 16581607 16581799 -86913175 + Lx2 LINE L1 3876 4067 -1816 1 711 2975 112 9 3 chr15 16581796 16582282 -86912692 + Lx2 LINE L1 5529 6019 -978 1 711 235 311 35 4 chr15 16582283 16582367 -86912607 - B3A SINE B2 -42 174 89 1 711 237 268 12 0 chr15 16582542 16582624 -86912350 + (TG)n Simple_repeat Simple_repeat 2 84 0 1 711 717 311 54 60 chr15 16584232 16584618 -86910356 + MLT1B LTR MaLR 3 386 -4 1 711 241 162 29 0 chr15 16584820 16584888 -86910086 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 1 711 255 125 0 0 chr15 16585260 16585300 -86909674 + (T)n Simple_repeat Simple_repeat 1 40 0 1 711 969 81 0 0 chr15 16585325 16585448 -86909526 - L1_Mus1 LINE L1 -99 6468 6346 1 711 293 247 39 49 chr15 16585448 16585550 -86909424 + MTC-int LTR MaLR 200 300 -958 1 711 4588 156 19 10 chr15 16585610 16586395 -86908579 - Lx LINE L1 0 6654 5863 1 711 358 313 91 60 chr15 16586870 16587322 -86907652 - L1_Mur3 LINE L1 -151 5729 5264 1 711 303 197 16 32 chr15 16587333 16587396 -86907578 + HAL1-3A_ME LINE L1 1975 2036 -822 1 711 398 289 62 109 chr15 16587420 16587630 -86907344 - L1M2 LINE L1 -914 5229 5014 1 711 422 323 15 55 chr15 16587630 16587830 -86907144 - B3A SINE B2 -5 193 2 1 711 398 289 62 109 chr15 16587830 16587941 -86907033 - L1M2 LINE L1 -1130 5013 4923 1 711 282 284 56 56 chr15 16588070 16588283 -86906691 + L1MA4A LINE L1 5691 5903 -400 1 711 1038 306 21 24 chr15 16588338 16588626 -86906348 - B4 SINE B4 0 292 6 1 711 778 325 11 39 chr15 16588654 16588933 -86906041 + RMER1B Other Other 60 330 -736 1 711 656 260 193 0 chr15 16588950 16589173 -86905801 + RMER1B Other Other 121 386 -680 1 711 580 279 54 11 chr15 16589180 16589365 -86905609 + RMER1B Other Other 746 938 -128 1 711 24 67 0 0 chr15 16590747 16590792 -86904182 + AT_rich Low_complexity Low_complexity 1 45 0 1 711 729 243 225 7 chr15 16590794 16591155 -86903819 - Lx4B LINE L1 0 7058 6526 1 711 2950 194 57 10 chr15 16591181 16591775 -86903199 + RLTR17 LTR ERVK 1 622 -70 1 711 2516 240 21 17 chr15 16591804 16592493 -86902481 - Lx4B LINE L1 -525 6533 5792 1 711 2978 194 49 9 chr15 16592492 16592536 -86902438 + MusHAL1 LINE L1 1321 1366 -1346 1 711 183 42 0 0 chr15 16592536 16592560 -86902414 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 711 2978 194 49 9 chr15 16592560 16593203 -86901771 + MusHAL1 LINE L1 1367 2035 -677 1 711 3068 76 2 0 chr15 16593203 16593598 -86901376 + MTA_Mm LTR MaLR 1 396 0 1 711 8255 52 6 5 chr15 16593598 16594687 -86900287 + MTA_Mm-int LTR MaLR 1 1091 -7 1 711 2690 52 57 3 chr15 16594685 16595055 -86899919 + MTA_Mm LTR MaLR 7 396 0 1 711 12289 171 31 24 chr15 16595057 16595178 -86899796 + L1_Mur2 LINE L1 3232 3332 -2545 1 711 181 0 0 65 chr15 16595178 16595209 -86899765 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 711 12289 171 31 24 chr15 16595209 16597613 -86897361 + L1_Mur2 LINE L1 3333 5773 -104 1 711 279 0 0 0 chr15 16598246 16598277 -86896697 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 711 405 0 0 0 chr15 16598277 16598321 -86896653 + (GA)n Simple_repeat Simple_repeat 1 45 0 1 711 1265 284 32 8 chr15 16598372 16598773 -86896201 - Lx6 LINE L1 -1252 6208 5798 1 711 605 49 0 12 chr15 16598791 16598873 -86896101 + (TATATG)n Simple_repeat Simple_repeat 5 85 0 1 711 423 92 0 0 chr15 16598885 16598950 -86896024 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 1 711 1622 214 42 12 chr15 16598999 16599405 -86895569 + L1_Mur2 LINE L1 4750 5167 -710 1 711 776 205 56 39 chr15 16599504 16599530 -86895444 - L1_Mur3 LINE L1 -1201 4679 4656 1 711 207 0 0 0 chr15 16599530 16599553 -86895421 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 711 776 205 56 39 chr15 16599553 16599759 -86895215 - L1_Mur3 LINE L1 -1225 4655 4443 1 711 3202 204 90 28 chr15 16599787 16599858 -86895116 - Lx4B LINE L1 -5 7053 6988 1 711 932 118 21 0 chr15 16599858 16600002 -86894972 - B1_Mus2 SINE Alu 0 147 1 1 711 3202 204 90 28 chr15 16600002 16600676 -86894298 - Lx4B LINE L1 -71 6987 6262 1 711 963 183 6 184 chr15 16600678 16600999 -86893975 - L1_Mur3 LINE L1 -1445 4432 4169 1 711 1446 168 8 0 chr15 16600997 16601253 -86893721 - L1_Mur3 LINE L1 -3112 2768 2511 1 711 5287 124 13 6 chr15 16601263 16602101 -86892873 - L1_Mus3 LINE L1 -3 6635 5792 1 711 4682 161 39 2 chr15 16602101 16602924 -86892050 + L1_Mus3 LINE L1 4942 5794 -89 1 711 366 184 26 0 chr15 16602920 16602996 -86891978 - L1_Mur3 LINE L1 -3364 2513 2436 1 711 344 164 0 0 chr15 16603291 16603352 -86891622 - RMER19C LTR ERVK -550 61 1 1 711 1239 241 52 28 chr15 16603353 16603677 -86891297 - Lx6 LINE L1 -855 6605 6274 1 711 313 153 53 0 chr15 16603678 16603744 -86891230 + Lx7 LINE L1 6897 6973 -487 1 711 764 263 5 11 chr15 16603744 16603932 -86891042 + Lx6 LINE L1 7273 7459 -1 1 711 357 24 0 0 chr15 16604167 16604209 -86890765 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 711 652 257 21 108 chr15 16604213 16604545 -86890429 + Lx7 LINE L1 7394 7696 0 1 711 591 239 2 20 chr15 16604585 16604768 -86890206 + L1_Rod LINE L1 5285 5523 -836 1 711 705 327 43 12 chr15 16605322 16605368 -86889606 + Lx9 LINE L1 6499 6543 -1101 1 711 357 43 0 0 chr15 16605368 16605415 -86889559 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 711 705 327 43 12 chr15 16605415 16605693 -86889281 + Lx9 LINE L1 6544 6832 -812 1 711 3678 151 8 2 chr15 16605736 16606354 -86888620 + Lx2 LINE L1 6372 6993 -4 1 711 2749 88 16 3 chr15 16606606 16606980 -86887994 + Lx3A LINE L1 6534 6912 -69 1 711 188 34 0 33 chr15 16606980 16607010 -86887964 + (TTAA)n Simple_repeat Simple_repeat 1 29 0 1 711 578 282 58 11 chr15 16607662 16607852 -86887122 + URR1B DNA MER1_type 25 223 -2 1 711 269 260 27 0 chr15 16608720 16608793 -86886181 + GA-rich Low_complexity Low_complexity 2 76 0 1 711 460 329 51 6 chr15 16610337 16610474 -86884500 + RSINE1 SINE B4 3 147 -18 1 711 291 71 0 0 chr15 16610474 16610516 -86884458 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 711 460 329 51 6 chr15 16610516 16610534 -86884440 + RSINE1 SINE B4 148 165 0 1 711 27 49 0 0 chr15 16610608 16610649 -86884325 + AT_rich Low_complexity Low_complexity 1 41 0 1 711 239 250 0 0 chr15 16610682 16610734 -86884240 + Lx7 LINE L1 7400 7451 -245 1 711 921 197 55 9 chr15 16610803 16610900 -86884074 + Lx7 LINE L1 7467 7562 -134 1 711 258 56 0 0 chr15 16610900 16610936 -86884038 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 1 711 921 197 55 9 chr15 16610936 16611058 -86883916 + Lx7 LINE L1 7563 7695 -1 1 711 874 314 34 30 chr15 16611921 16612328 -86882646 + Lx9 LINE L1 6416 6824 -820 1 711 860 243 100 17 chr15 16612331 16612561 -86882413 - MTD LTR MaLR -2 417 169 1 711 699 21 31 0 chr15 16612579 16612676 -86882298 + (TCTA)n Simple_repeat Simple_repeat 2 101 0 1 711 280 57 0 70 chr15 16612755 16612812 -86882162 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 1 711 21 36 0 0 chr15 16613824 16613852 -86881122 + AT_rich Low_complexity Low_complexity 1 28 0 1 711 188 69 138 0 chr15 16614072 16614101 -86880873 + MIRb SINE MIR 226 258 -10 1 711 382 294 57 69 chr15 16614134 16614170 -86880804 - B2_Mm2 SINE B2 -21 174 133 1 711 345 102 0 0 chr15 16614170 16614229 -86880745 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 1 711 382 294 57 69 chr15 16614229 16614241 -86880733 - B2_Mm2 SINE B2 -63 132 125 1 711 432 0 0 0 chr15 16614241 16614289 -86880685 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 711 560 234 32 8 chr15 16614289 16614414 -86880560 - B3 SINE B2 -87 129 2 1 711 31 0 0 0 chr15 16614458 16614489 -86880485 + AT_rich Low_complexity Low_complexity 1 31 0 1 711 611 208 40 20 chr15 16615060 16615212 -86879762 - Lx3B LINE L1 -25 6948 6794 1 711 396 40 0 0 chr15 16615614 16615664 -86879310 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 711 1403 77 0 80 chr15 16616421 16616647 -86878327 + L1Md_F2 LINE L1 6363 6570 -12 1 711 400 27 82 0 chr15 16616714 16616787 -86878187 + (TTTTTG)n Simple_repeat Simple_repeat 2 80 0 1 711 893 168 0 11 chr15 16617839 16618014 -86876960 + CT-rich Low_complexity Low_complexity 1 173 0 1 711 183 26 49 49 chr15 16618028 16618069 -86876905 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 1 711 672 352 38 34 chr15 16618078 16618495 -86876479 - Lx8 LINE L1 -181 7292 6874 1 711 1014 283 307 42 chr15 16618592 16618950 -86876024 + MT2A LTR ERVL 1 453 -80 1 711 422 346 11 0 chr15 16618998 16619180 -86875794 - Lx8 LINE L1 -706 6767 6584 1 711 636 38 0 0 chr15 16619264 16619343 -86875631 + (CA)n Simple_repeat Simple_repeat 2 80 0 1 711 323 325 16 45 chr15 16619400 16619642 -86875332 - Lx8 LINE L1 -1523 5950 5716 1 711 243 61 0 0 chr15 16619690 16619723 -86875251 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 711 252 77 0 0 chr15 16620216 16620255 -86874719 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 1 711 1680 242 103 30 chr15 16620277 16620640 -86874334 - Lx6 LINE L1 -177 7283 6905 1 711 1740 228 19 35 chr15 16620640 16621068 -86873906 + MTC LTR MaLR 1 421 0 1 711 1680 242 103 30 chr15 16621068 16621168 -86873806 - Lx6 LINE L1 -556 6904 6786 1 711 267 31 0 0 chr15 16621356 16621388 -86873586 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 711 204 40 0 0 chr15 16621396 16621421 -86873553 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 711 1942 287 98 17 chr15 16621601 16622372 -86872602 - ORR1D1-int LTR MaLR -534 836 3 1 711 245 301 126 21 chr15 16622382 16622477 -86872497 - ORR1D1 LTR MaLR -12 358 254 1 711 381 70 0 0 chr15 16622513 16622570 -86872404 + (A)n Simple_repeat Simple_repeat 1 57 0 1 711 336 298 10 0 chr15 16622570 16622674 -86872300 - ORR1D1 LTR MaLR -269 105 1 1 711 1031 209 170 22 chr15 16623139 16623462 -86871512 - L1_Mur3 LINE L1 -2185 3695 3325 1 711 1331 201 22 16 chr15 16623457 16623780 -86871194 - L1_Mur3 LINE L1 -4264 1616 1292 1 711 1339 260 19 14 chr15 16624093 16624560 -86870414 - L1_Mur3 LINE L1 -5815 1271 859 1 711 783 347 72 15 chr15 16624554 16625265 -86869709 - L1_Mur3 LINE L1 -7063 665 49 1 711 25 0 0 0 chr15 16626431 16626456 -86868518 + AT_rich Low_complexity Low_complexity 1 25 0 1 711 22 0 0 0 chr15 16626808 16626830 -86868144 + AT_rich Low_complexity Low_complexity 1 22 0 1 711 21 0 0 0 chr15 16626877 16626898 -86868076 + AT_rich Low_complexity Low_complexity 1 21 0 1 711 387 367 109 9 chr15 16626899 16627229 -86867745 - MLT2B2 LTR ERVL -152 363 1 1 711 2136 198 5 15 chr15 16627246 16627657 -86867317 + MTB_Mm LTR MaLR 1 407 0 1 711 1691 242 33 3 chr15 16627922 16628311 -86866663 - MTD LTR MaLR -6 413 13 1 711 24 32 0 0 chr15 16628972 16629003 -86865971 + AT_rich Low_complexity Low_complexity 1 31 0 1 711 1101 324 16 6 chr15 16629687 16630053 -86864921 + ORR1D2 LTR MaLR 1 370 0 1 711 698 44 10 2 chr15 16630325 16630436 -86864538 - B1_Mm SINE Alu 0 117 2 1 711 827 247 11 32 chr15 16630438 16630626 -86864348 + B3 SINE B2 32 215 -1 2 711 720 333 27 9 chr15 16630666 16630909 -86864065 - Lx9 LINE L1 -1067 6577 6226 2 711 1055 303 64 81 chr15 16630915 16631443 -86863531 + MTC-int LTR MaLR 585 1103 -155 2 711 553 270 107 44 chr15 16631471 16631676 -86863298 + MTC LTR MaLR 1 218 -203 2 711 411 232 0 12 chr15 16631662 16631745 -86863229 + MTC LTR MaLR 335 416 -5 2 711 399 232 10 0 chr15 16631759 16631858 -86863116 + MTD-int LTR MaLR 1148 1247 -11 2 711 441 242 20 0 chr15 16631901 16632000 -86862974 + MTD LTR MaLR 8 108 -313 2 711 998 294 40 20 chr15 16632172 16632470 -86862504 + MTD LTR MaLR 116 419 0 2 711 21 0 0 0 chr15 16632516 16632537 -86862437 + AT_rich Low_complexity Low_complexity 1 21 0 2 711 1109 267 46 27 chr15 16632756 16633129 -86861845 - Lx9 LINE L1 -1 5846 5467 2 711 557 186 56 21 chr15 16633129 16633272 -86861702 - ORR1A3-int LTR MaLR -1750 213 66 2 711 1777 231 12 20 chr15 16633272 16633674 -86861300 + RMER1B Other Other 663 1061 -5 2 711 474 217 16 40 chr15 16633674 16633799 -86861175 + URR1B DNA MER1_type 104 225 0 2 711 505 40 40 0 chr15 16634052 16634127 -86860847 + (CAAAA)n Simple_repeat Simple_repeat 3 80 0 2 711 561 297 57 5 chr15 16634889 16635082 -86859892 + Lx8 LINE L1 6917 7119 -354 2 711 297 0 0 0 chr15 16635497 16635530 -86859444 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 711 633 27 0 0 chr15 16636579 16636654 -86858320 + (CAAAA)n Simple_repeat Simple_repeat 2 76 0 2 711 26 50 0 0 chr15 16637068 16637108 -86857866 + AT_rich Low_complexity Low_complexity 1 40 0 2 711 639 158 0 0 chr15 16637878 16638005 -86856969 + (TG)n Simple_repeat Simple_repeat 2 128 0 2 711 570 54 0 0 chr15 16638205 16638279 -86856695 + (TC)n Simple_repeat Simple_repeat 2 75 0 2 711 3501 254 33 20 chr15 16638284 16639197 -86855777 - Lx5 LINE L1 -8 7042 6118 2 711 5575 180 104 2 chr15 16639231 16639320 -86855654 + Lx5 LINE L1 4628 4716 -1161 2 711 312 27 0 0 chr15 16639320 16639357 -86855617 + (TAA)n Simple_repeat Simple_repeat 2 38 0 2 711 5575 183 94 3 chr15 16639357 16640612 -86854362 + Lx5 LINE L1 4717 6095 -955 2 711 264 325 85 35 chr15 16640756 16640957 -86854017 + Lx9 LINE L1 7210 7420 -224 2 711 454 265 71 52 chr15 16642005 16642160 -86852814 + ORR1D1 LTR MaLR 7 164 -210 2 711 235 354 0 8 chr15 16642178 16642309 -86852665 + (TATG)n Simple_repeat Simple_repeat 3 132 0 2 711 7498 74 7 2 chr15 16642771 16644065 -86850909 + L1_Mus1 LINE L1 5269 6567 0 2 711 246 225 30 42 chr15 16644285 16644452 -86850522 + (TA)n Simple_repeat Simple_repeat 2 166 0 2 711 34 72 0 0 chr15 16644481 16644550 -86850424 + AT_rich Low_complexity Low_complexity 1 69 0 2 711 31 44 0 0 chr15 16644655 16644700 -86850274 + AT_rich Low_complexity Low_complexity 1 45 0 2 711 311 335 96 24 chr15 16644733 16644941 -86850033 + L1MEf LINE L1 1903 2125 -4075 2 711 745 297 105 32 chr15 16644980 16645324 -86849650 - Lx8 LINE L1 -526 6947 6579 2 711 1518 271 39 37 chr15 16645334 16645844 -86849130 + Lx8 LINE L1 6963 7473 0 2 88 8502 20 0 0 chr15 16646110 16647288 -86847686 - L1Md_A LINE L1 0 6582 5405 2 712 830 247 158 34 chr15 16647525 16647876 -86847098 + MTD LTR MaLR 1 414 -5 2 712 24 0 0 0 chr15 16648172 16648196 -86846778 + AT_rich Low_complexity Low_complexity 1 24 0 2 712 279 0 0 0 chr15 16648544 16648575 -86846399 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 712 342 0 0 0 chr15 16648575 16648612 -86846362 + (GA)n Simple_repeat Simple_repeat 2 39 0 2 712 3061 98 17 4 chr15 16648829 16649292 -86845682 - Lx LINE L1 -8 6646 6178 2 712 233 301 0 35 chr15 16649957 16650043 -86844931 + (TATATG)n Simple_repeat Simple_repeat 5 87 0 2 712 25 31 0 0 chr15 16650765 16650797 -86844177 + AT_rich Low_complexity Low_complexity 1 32 0 2 712 3599 145 30 11 chr15 16651521 16652156 -86842818 - Lx LINE L1 0 6654 6008 2 712 422 36 18 0 chr15 16652156 16652212 -86842762 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 712 263 362 105 0 chr15 16652242 16652347 -86842627 + PB1 SINE Alu 12 127 0 2 712 24 32 0 0 chr15 16652633 16652664 -86842310 + AT_rich Low_complexity Low_complexity 1 31 0 2 712 471 35 0 0 chr15 16653996 16654053 -86840921 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 712 347 316 121 57 chr15 16654059 16654200 -86840774 - RSINE1 SINE B4 -13 152 3 2 712 1699 261 90 5 chr15 16654372 16654719 -86840255 - Lx6 LINE L1 -189 7271 6913 2 712 1245 82 0 0 chr15 16654719 16654890 -86840084 + (TCTCCC)n Simple_repeat Simple_repeat 3 173 0 2 712 1699 261 90 5 chr15 16654890 16654985 -86839989 - Lx6 LINE L1 -548 6912 6793 2 712 661 301 11 0 chr15 16654981 16655157 -86839817 + Lx6 LINE L1 7281 7458 -2 2 712 285 131 0 0 chr15 16655476 16655537 -86839437 + (CATA)n Simple_repeat Simple_repeat 4 64 0 2 712 2678 157 8 16 chr15 16656139 16656639 -86838335 - Lx3A LINE L1 -5 6976 6481 2 712 216 0 0 0 chr15 16656888 16656912 -86838062 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 712 245 205 50 25 chr15 16661979 16662059 -86832915 + (TAGA)n Simple_repeat Simple_repeat 1 82 0 2 712 441 0 0 0 chr15 16662198 16662247 -86832727 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 712 405 0 0 0 chr15 16662247 16662291 -86832683 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 712 267 315 77 36 chr15 16662653 16662821 -86832153 - Lx8 LINE L1 -8 7465 7291 2 712 249 197 0 0 chr15 16662932 16663003 -86831971 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 712 23 54 0 0 chr15 16663066 16663103 -86831871 + AT_rich Low_complexity Low_complexity 1 37 0 2 712 189 74 0 0 chr15 16663179 16663206 -86831768 + (T)n Simple_repeat Simple_repeat 1 27 0 2 712 312 333 0 0 chr15 16663709 16663783 -86831191 + RSINE1 SINE B4 55 128 -37 2 712 324 102 0 0 chr15 16663783 16663832 -86831142 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 712 312 333 0 0 chr15 16663832 16663847 -86831127 + RSINE1 SINE B4 129 143 -22 2 712 180 0 0 0 chr15 16663973 16663993 -86830981 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2 712 3898 45 12 2 chr15 16665318 16665807 -86829167 + L1Md_F3 LINE L1 6090 6583 -1 2 712 441 0 0 0 chr15 16666936 16666985 -86827989 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 2 712 24 0 0 0 chr15 16667031 16667055 -86827919 + AT_rich Low_complexity Low_complexity 1 24 0 2 712 1221 215 116 0 chr15 16668844 16669146 -86825828 - Lx9 LINE L1 -188 7456 7120 2 712 447 52 0 0 chr15 16669149 16669207 -86825767 + (TCC)n Simple_repeat Simple_repeat 3 60 0 2 712 428 141 0 75 chr15 16669218 16669325 -86825649 - L1_Mus4 LINE L1 0 6636 6538 2 712 729 94 0 0 chr15 16669325 16669410 -86825564 - L1_Mus4 LINE L1 -190 6446 6362 2 712 901 63 0 0 chr15 16669409 16669536 -86825438 + MusHAL1 LINE L1 839 965 -1747 2 712 2677 262 69 11 chr15 16669532 16670316 -86824658 - Lx9 LINE L1 -510 7134 6306 2 712 263 280 30 15 chr15 16670378 16670512 -86824462 + Lx9 LINE L1 7509 7644 0 2 712 4637 136 18 24 chr15 16671256 16672042 -86822932 - Lx3B LINE L1 -4 6969 6189 2 712 2416 111 97 5 chr15 16672732 16673105 -86821869 - MTB_Mm LTR MaLR 0 407 1 2 712 961 227 22 9 chr15 16674433 16674655 -86820319 + URR1B DNA MER1_type 1 225 0 2 712 23 0 0 0 chr15 16676008 16676031 -86818943 + AT_rich Low_complexity Low_complexity 1 23 0 2 712 6739 107 52 5 chr15 16677257 16678374 -86816600 - Lx LINE L1 0 6654 5494 2 712 33 25 0 0 chr15 16679082 16679122 -86815852 + AT_rich Low_complexity Low_complexity 1 40 0 2 712 1133 55 7 14 chr15 16679223 16679371 -86815603 - B1_Mus2 SINE Alu 0 147 1 2 712 285 326 31 106 chr15 16679747 16679908 -86815066 + B4A SINE B4 144 292 0 2 712 240 86 0 0 chr15 16680466 16680501 -86814473 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 712 26 93 0 0 chr15 16680968 16681043 -86813931 + AT_rich Low_complexity Low_complexity 1 75 0 2 712 283 256 50 17 chr15 16682461 16682580 -86812394 + L1MA6 LINE L1 6164 6286 -14 2 712 22 56 0 0 chr15 16682923 16682959 -86812015 + AT_rich Low_complexity Low_complexity 1 36 0 2 712 273 345 12 0 chr15 16682966 16683050 -86811924 - Lx5 LINE L1 -80 6970 6886 2 712 28 91 0 0 chr15 16683291 16683368 -86811606 + AT_rich Low_complexity Low_complexity 1 77 0 2 712 912 148 0 0 chr15 16684415 16684557 -86810417 - Lx3A LINE L1 -223 6758 6617 2 712 1007 148 15 25 chr15 16684559 16684760 -86810214 + Lx3A LINE L1 6768 6966 -15 2 712 180 0 0 0 chr15 16684760 16684780 -86810194 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 2 712 225 250 125 0 chr15 16684793 16684857 -86810117 + ID2 SINE ID 1 72 -11 2 712 242 380 76 74 chr15 16685351 16685643 -86809331 + RSINE1 SINE B4 3 276 -16 2 712 354 45 0 0 chr15 16685643 16685687 -86809287 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 712 450 0 0 0 chr15 16685687 16685737 -86809237 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 712 242 306 25 100 chr15 16685737 16685753 -86809221 + RSINE1 SINE B4 152 164 -1 2 712 1255 62 0 0 chr15 16686177 16686339 -86808635 - L1_Mus2 LINE L1 0 6566 6405 2 712 951 305 7 47 chr15 16687131 16687406 -86807568 + B4A SINE B4 9 272 -20 2 712 200 250 31 0 chr15 16687416 16687480 -86807494 + (CATATA)n Simple_repeat Simple_repeat 4 69 0 2 712 554 282 59 64 chr15 16687748 16688138 -86806836 - Lx9 LINE L1 -1 7643 7256 2 712 3044 66 13 5 chr15 16688832 16689229 -86805745 - MTB LTR MaLR 0 400 1 2 712 325 311 79 50 chr15 16689262 16690240 -86804734 - L1_Mur1 LINE L1 -3451 2692 1676 2 712 1402 290 34 71 chr15 16691263 16691808 -86803166 - Lx6 LINE L1 -56 7404 6893 2 712 461 17 17 0 chr15 16691808 16691866 -86803108 + (TC)n Simple_repeat Simple_repeat 1 59 0 2 712 465 283 23 0 chr15 16691880 16692053 -86802921 + L1_Mur3 LINE L1 1028 1204 -6508 2 712 626 247 37 16 chr15 16692151 16692340 -86802634 + Lx7 LINE L1 7504 7696 0 2 712 1416 142 20 28 chr15 16694041 16694294 -86800680 + Lx LINE L1 6397 6647 -7 2 712 597 322 35 106 chr15 16694728 16695134 -86799840 + MTE2b LTR MaLR 1 377 -2 2 712 695 305 88 33 chr15 16695674 16696129 -86798845 - L1MC3 LINE L1 -224 7561 7082 2 712 288 0 0 0 chr15 16696331 16696363 -86798611 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 712 5824 89 52 16 chr15 16696755 16697631 -86797343 + Lx3_Mus LINE L1 6094 7001 -8 3 712 238 338 45 65 chr15 16697668 16698206 -86796768 - L1MC3 LINE L1 -1351 6434 5908 2 712 255 61 0 0 chr15 16699230 16699263 -86795711 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 3 712 225 288 12 12 chr15 16699269 16699350 -86795624 - L1MC3 LINE L1 -1203 4943 4863 2 712 32 0 0 0 chr15 16699434 16699466 -86795508 + AT_rich Low_complexity Low_complexity 1 32 0 3 712 1815 131 99 3 chr15 16699480 16699802 -86795172 - Lx3_Mus LINE L1 -5 7004 6652 3 712 808 311 19 34 chr15 16700997 16701135 -86793839 + ORR1D1 LTR MaLR 5 140 -234 3 712 204 40 0 0 chr15 16701135 16701160 -86793814 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 3 712 808 311 19 34 chr15 16701160 16701284 -86793690 + ORR1D1 LTR MaLR 141 263 -111 3 712 2393 292 58 24 chr15 16701472 16702294 -86792680 - Lx6 LINE L1 -4 7456 6607 3 712 562 239 7 21 chr15 16702294 16702435 -86792539 + B1_Mm SINE Alu 2 140 -7 3 712 329 341 16 32 chr15 16702623 16702808 -86792166 + B3A SINE B2 1 182 -16 3 712 315 0 0 0 chr15 16704831 16704866 -86790108 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 712 402 21 0 0 chr15 16705330 16705377 -86789597 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 712 320 228 24 48 chr15 16705461 16705544 -86789430 - MTD LTR MaLR -272 147 67 3 712 1605 266 92 35 chr15 16705608 16705962 -86789012 - Lx9 LINE L1 -878 6766 6400 3 712 277 24 0 45 chr15 16705962 16706006 -86788968 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 3 712 1605 266 92 35 chr15 16706006 16706228 -86788746 - Lx9 LINE L1 -1245 6399 6157 3 712 272 288 15 36 chr15 16706276 16706413 -86788561 - Lx9 LINE L1 -1616 6028 5895 3 712 362 276 34 0 chr15 16706539 16706769 -86788205 - L1M1 LINE L1 -644 5545 5302 3 712 1093 285 70 3 chr15 16706807 16707162 -86787812 + Lx3C LINE L1 6596 6974 -2 3 712 1253 41 0 0 chr15 16708444 16708591 -86786383 + B1_Mus1 SINE Alu 2 148 0 3 712 185 0 0 39 chr15 16708591 16708617 -86786357 + (CAAAAA)n Simple_repeat Simple_repeat 6 30 0 3 712 213 194 94 31 chr15 16709439 16709503 -86785471 - MIR3 SINE MIR -32 176 109 3 712 2788 179 111 20 chr15 16709953 16710586 -86784388 - RMER6C LTR ERVK 0 690 1 3 712 314 346 54 30 chr15 16711372 16711539 -86783435 - RMER15 LTR ERVL -105 470 300 3 712 246 32 0 0 chr15 16711621 16711652 -86783322 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 712 3204 48 10 2 chr15 16711829 16712226 -86782748 - MTB LTR MaLR 0 400 1 3 712 21 36 0 0 chr15 16712949 16712977 -86781997 + AT_rich Low_complexity Low_complexity 1 28 0 3 712 228 67 0 0 chr15 16713010 16713040 -86781934 + (TGG)n Simple_repeat Simple_repeat 1 30 0 3 712 213 39 0 0 chr15 16713041 16713067 -86781907 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 712 185 83 0 27 chr15 16713559 16713596 -86781378 + (TTG)n Simple_repeat Simple_repeat 1 36 0 3 712 534 213 31 62 chr15 16713596 16713726 -86781248 - B1_Mur2 SINE Alu -13 136 11 3 712 32865 82 23 9 chr15 16715809 16721661 -86773313 - L1Md_F2 LINE L1 -4 6578 417 3 712 24 0 0 0 chr15 16721667 16721691 -86773283 + AT_rich Low_complexity Low_complexity 1 24 0 3 712 33 0 0 0 chr15 16721727 16721760 -86773214 + AT_rich Low_complexity Low_complexity 1 33 0 3 712 516 170 334 0 chr15 16721761 16721974 -86773000 - Lx3B LINE L1 -3 6970 6687 3 712 785 136 22 29 chr15 16721975 16722111 -86772863 + Lx3B LINE L1 6538 6672 -301 3 712 21 0 0 0 chr15 16722161 16722182 -86772792 + AT_rich Low_complexity Low_complexity 1 21 0 3 712 207 0 0 0 chr15 16723707 16723730 -86771244 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 712 3323 149 17 40 chr15 16724378 16724980 -86769994 - Lx2 LINE L1 0 6997 6410 3 712 2006 183 56 3 chr15 16724982 16725372 -86769602 + Lx2 LINE L1 6016 6426 -571 3 712 975 101 0 0 chr15 16725385 16725523 -86769451 + B1_Mm SINE Alu 1 138 -9 3 712 755 339 54 4 chr15 16725594 16725872 -86769102 + B4 SINE B4 1 292 0 3 712 209 108 0 26 chr15 16726565 16726603 -86768371 + (TCTCCC)n Simple_repeat Simple_repeat 3 39 0 3 712 468 51 0 0 chr15 16726694 16726753 -86768221 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 712 669 58 0 0 chr15 16727610 16727696 -86767278 + (CAAAA)n Simple_repeat Simple_repeat 2 87 0 3 712 27 0 0 0 chr15 16728250 16728277 -86766697 + AT_rich Low_complexity Low_complexity 1 27 0 3 712 2051 334 31 8 chr15 16729611 16730439 -86764535 + Lx7 LINE L1 6454 7300 -396 3 712 267 31 0 0 chr15 16730447 16730479 -86764495 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 712 21 0 0 0 chr15 16731183 16731204 -86763770 + AT_rich Low_complexity Low_complexity 1 21 0 3 712 347 244 12 12 chr15 16731739 16731822 -86763152 + B4A SINE B4 192 274 -18 3 712 22 0 0 0 chr15 16731956 16731978 -86762996 + AT_rich Low_complexity Low_complexity 1 22 0 3 712 312 27 0 0 chr15 16733772 16733809 -86761165 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 712 971 112 6 0 chr15 16733809 16733978 -86760996 + (GA)n Simple_repeat Simple_repeat 1 171 0 3 712 463 191 0 0 chr15 16734365 16734459 -86760515 - Lx9 LINE L1 -1 7643 7550 3 712 1309 263 70 12 chr15 16734477 16734889 -86760085 - Lx9 LINE L1 -187 7457 7022 3 712 259 256 11 11 chr15 16734889 16734976 -86759998 - Lx7 LINE L1 0 7696 7610 3 712 204 40 0 0 chr15 16735035 16735060 -86759914 + (GGAA)n Simple_repeat Simple_repeat 4 28 0 3 712 1224 101 0 0 chr15 16735060 16735238 -86759736 + (GGGA)n Simple_repeat Simple_repeat 1 178 0 3 712 591 15 0 0 chr15 16735241 16735309 -86759665 + (GGAA)n Simple_repeat Simple_repeat 2 69 0 3 712 222 118 0 0 chr15 16735323 16735357 -86759617 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 712 683 312 83 60 chr15 16736094 16736564 -86758410 - Lx8 LINE L1 -56 7417 6937 3 712 597 136 0 0 chr15 16736595 16736698 -86758276 + (TCC)n Simple_repeat Simple_repeat 3 105 0 3 712 248 356 137 10 chr15 16736710 16736812 -86758162 - RSINE1 SINE B4 0 165 51 3 712 195 139 0 0 chr15 16736997 16737033 -86757941 + (TTA)n Simple_repeat Simple_repeat 3 38 0 3 712 240 35 0 0 chr15 16739191 16739220 -86755754 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 712 435 380 61 10 chr15 16739242 16739439 -86755535 - B4 SINE B4 -2 290 84 3 712 399 264 18 18 chr15 16739566 16739678 -86755296 - Lx8 LINE L1 -154 7319 7208 3 712 369 198 0 0 chr15 16739714 16739830 -86755144 + CT-rich Low_complexity Low_complexity 1 116 0 3 712 564 42 0 0 chr15 16739830 16739901 -86755073 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 712 968 306 27 19 chr15 16739905 16740272 -86754702 - Lx8 LINE L1 -323 7150 6781 3 712 376 221 0 0 chr15 16740273 16740350 -86754624 + B2_Mm2 SINE B2 1 77 -118 3 712 794 340 57 41 chr15 16740401 16740842 -86754132 - Lx8 LINE L1 -669 6804 6357 3 712 297 284 44 9 chr15 16741299 16741448 -86753526 - L1M2 LINE L1 -687 5616 5462 3 712 311 331 49 42 chr15 16741704 16741969 -86753005 - L1M2 LINE L1 -1097 5046 4780 3 712 701 126 0 16 chr15 16742027 16742148 -86752826 + (TCCC)n Simple_repeat Simple_repeat 3 121 0 3 712 684 143 60 133 chr15 16742173 16742391 -86752583 - Lx3C LINE L1 -9 6967 6766 3 712 21 0 0 0 chr15 16742479 16742500 -86752474 + AT_rich Low_complexity Low_complexity 1 21 0 3 712 398 85 63 11 chr15 16743053 16743148 -86751826 + (TA)n Simple_repeat Simple_repeat 2 101 0 3 712 21 0 0 0 chr15 16743265 16743286 -86751688 + AT_rich Low_complexity Low_complexity 1 21 0 3 712 272 237 83 8 chr15 16744273 16744405 -86750569 - L1MC LINE L1 -1621 4525 4384 3 712 473 122 0 24 chr15 16744732 16744757 -86750217 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 3 712 1269 83 0 0 chr15 16744757 16744937 -86750037 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 712 473 122 0 24 chr15 16744937 16744995 -86749979 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 3 712 3235 126 65 12 chr15 16745004 16745573 -86749401 - Lx3C LINE L1 -1 6975 6377 3 712 428 287 89 87 chr15 16745889 16745975 -86748999 - L1MC LINE L1 -2157 3989 3904 3 712 1952 81 0 42 chr15 16745975 16746260 -86748714 - L1Md_F2 LINE L1 -12 6570 6298 3 712 428 287 89 87 chr15 16746260 16746589 -86748385 - L1MC LINE L1 -2243 3903 3574 3 712 356 327 32 13 chr15 16747196 16747354 -86747620 - ERVL-B4-int LTR ERVL -1476 4238 4078 3 712 595 339 63 23 chr15 16747379 16747681 -86747293 - ORR1E LTR MaLR -45 314 1 3 712 225 0 0 0 chr15 16748252 16748277 -86746697 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 712 1064 124 152 5 chr15 16749358 16749569 -86745405 + Lx3A LINE L1 6732 6973 -8 3 712 1070 70 0 7 chr15 16751333 16751470 -86743504 + B1_Mm SINE Alu 4 139 -8 3 712 266 0 29 0 chr15 16751470 16751504 -86743470 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 712 4005 24 2 0 chr15 16752013 16752480 -86742494 + L1Md_A LINE L1 6115 6582 0 3 712 23 0 0 0 chr15 16754495 16754518 -86740456 + AT_rich Low_complexity Low_complexity 1 23 0 3 712 323 226 108 14 chr15 16754697 16754845 -86740129 - Lx9 LINE L1 -1 7643 7482 3 712 393 176 0 0 chr15 16754848 16754956 -86740018 + (CA)n Simple_repeat Simple_repeat 2 109 0 3 712 623 259 79 30 chr15 16755010 16755213 -86739761 + B3 SINE B2 1 213 -3 3 712 258 187 37 85 chr15 16755273 16755355 -86739619 - Lx6 LINE L1 -3 7457 7380 3 712 28 71 0 0 chr15 16755448 16755504 -86739470 + AT_rich Low_complexity Low_complexity 1 56 0 3 712 2251 57 0 0 chr15 16756165 16756447 -86738527 - L1_Mus1 LINE L1 -2 6565 6284 3 712 5492 50 7 4 chr15 16756447 16757135 -86737839 + L1_Mus1 LINE L1 5589 6278 -289 3 712 186 71 0 0 chr15 16757161 16757189 -86737785 + (TTG)n Simple_repeat Simple_repeat 2 29 0 3 712 248 268 92 10 chr15 16759264 16759362 -86735612 + MER104 DNA Tc2 4 109 -72 3 712 180 271 65 103 chr15 16760753 16760860 -86734114 + L3 LINE CR1 2748 2850 -1639 3 712 249 314 0 0 chr15 16761214 16761284 -86733690 + Lx9 LINE L1 6582 6651 -993 3 712 23 33 0 0 chr15 16761686 16761716 -86733258 + AT_rich Low_complexity Low_complexity 1 30 0 3 712 287 265 60 0 chr15 16762737 16762820 -86732154 - Lx6 LINE L1 -384 7076 6989 3 712 439 365 50 34 chr15 16763271 16763509 -86731465 - B4A SINE B4 -36 256 15 3 712 22 99 0 0 chr15 16763652 16763723 -86731251 + AT_rich Low_complexity Low_complexity 1 71 0 3 712 327 269 90 28 chr15 16763878 16763932 -86731042 - MT2A LTR ERVL 0 533 480 3 712 395 106 0 15 chr15 16763932 16763999 -86730975 + (CATA)n Simple_repeat Simple_repeat 2 67 0 3 712 327 269 90 28 chr15 16763999 16764089 -86730885 - MT2A LTR ERVL -54 479 381 3 712 401 288 94 66 chr15 16764108 16764320 -86730654 - RMER12 LTR ERVK -4 1318 1101 4 712 5154 108 23 14 chr15 16764506 16765331 -86729643 - RLTR22_Mur LTR ERVK -1016 832 1 4 712 358 229 151 7 chr15 16765331 16765466 -86729508 - MT2B LTR ERVL -135 466 384 4 712 5088 154 54 10 chr15 16765479 16766411 -86728563 + Lx2 LINE L1 6024 6996 -1 4 712 2957 228 43 51 chr15 16766419 16767216 -86727758 + MERVL_2A-int LTR ERVL 1227 2016 -3745 4 712 1269 230 7 64 chr15 16767216 16767421 -86727553 - RMER17C LTR ERVK 0 410 220 4 712 725 51 10 0 chr15 16767421 16767519 -86727455 + (GA)n Simple_repeat Simple_repeat 2 100 0 4 712 1269 228 49 32 chr15 16767519 16767788 -86727186 - RMER17C LTR ERVK -536 422 16 4 712 3930 216 50 14 chr15 16767789 16768680 -86726294 + MERVL_2A-int LTR ERVL 2020 2943 -2818 4 712 598 262 16 27 chr15 16768684 16768868 -86726106 - Lx6 LINE L1 -1 7459 7278 4 712 1421 246 134 3 chr15 16768868 16769479 -86725495 + MERVL_2A-int LTR ERVL 3487 4178 -1583 4 712 1085 0 36 0 chr15 16769558 16769698 -86725276 + (TCTA)n Simple_repeat Simple_repeat 2 146 0 4 712 279 54 0 0 chr15 16769732 16769769 -86725205 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 4 712 385 306 12 30 chr15 16769780 16769945 -86725029 - Lx6 LINE L1 -724 6736 6575 4 712 4641 176 38 32 chr15 16769947 16770950 -86724024 - RLTR25A LTR ERVK 0 1103 144 4 712 2414 69 22 3 chr15 16770950 16771270 -86723704 + L1_Mus1 LINE L1 6242 6567 0 4 712 1697 211 116 130 chr15 16771270 16771433 -86723541 - RLTR25A LTR ERVK -885 143 1 4 712 2843 226 53 18 chr15 16771439 16772160 -86722814 - Lx5 LINE L1 -696 6354 5609 4 712 233 57 29 0 chr15 16773100 16773135 -86721839 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 712 1168 103 0 0 chr15 16773135 16773310 -86721664 + L1Md_F2 LINE L1 6395 6569 -13 4 712 8444 25 1 0 chr15 16774772 16775958 -86719016 - L1Md_T LINE L1 0 6582 5395 4 712 293 327 9 18 chr15 16776315 16776427 -86718547 + ID_B1 SINE B4 106 216 -8 4 712 180 0 0 0 chr15 16776447 16776467 -86718507 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 4 712 491 317 94 23 chr15 16776694 16776865 -86718109 + B3 SINE B2 9 191 -25 4 712 235 293 28 66 chr15 16776955 16777061 -86717913 + PB1D9 SINE Alu 14 115 -5 4 1 2388 91 12 0 chr15 16777112 16777453 -86717521 - L1_Mus2 LINE L1 0 6566 6222 4 713 244 218 129 37 chr15 16777453 16777559 -86717415 + B1F SINE Alu 31 144 -5 4 713 531 0 0 0 chr15 16777586 16777645 -86717329 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 713 212 0 0 35 chr15 16778066 16778095 -86716879 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 713 1068 113 0 0 chr15 16779030 16779172 -86715802 - B1_Mus1 SINE Alu -6 142 1 4 713 21 0 0 0 chr15 16779519 16779540 -86715434 + AT_rich Low_complexity Low_complexity 1 21 0 4 713 239 358 66 8 chr15 16780225 16780346 -86714628 + ID_B1 SINE B4 78 205 -19 4 713 546 16 0 0 chr15 16780349 16780412 -86714562 + (CAAAA)n Simple_repeat Simple_repeat 2 64 0 4 713 234 308 0 0 chr15 16780419 16780484 -86714490 + GA-rich Low_complexity Low_complexity 4 68 0 4 713 183 42 0 0 chr15 16780966 16780990 -86713984 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 713 905 94 156 0 chr15 16781053 16781213 -86713761 + B2_Mm2 SINE B2 4 188 -7 4 713 598 352 11 14 chr15 16781392 16781669 -86713305 - B4A SINE B4 -16 276 1 4 713 420 361 38 52 chr15 16783785 16783998 -86710976 + B4A SINE B4 53 262 -30 4 713 315 0 0 0 chr15 16784004 16784039 -86710935 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 713 477 0 0 0 chr15 16784040 16784093 -86710881 + (GA)n Simple_repeat Simple_repeat 1 53 0 4 713 3610 108 8 2 chr15 16784241 16784777 -86710197 + L1_Mus4 LINE L1 6097 6635 -1 4 713 31 26 0 0 chr15 16785056 16785094 -86709880 + AT_rich Low_complexity Low_complexity 1 38 0 4 713 40 73 0 0 chr15 16786465 16786547 -86708427 + AT_rich Low_complexity Low_complexity 1 82 0 4 713 270 225 0 0 chr15 16786964 16787044 -86707930 + (TG)n Simple_repeat Simple_repeat 1 80 0 4 713 298 222 20 29 chr15 16787307 16787409 -86707565 + T-rich Low_complexity Low_complexity 2 102 0 4 713 4704 124 30 1 chr15 16787918 16788647 -86706327 - Lx2 LINE L1 -2 6995 6246 4 713 310 221 10 10 chr15 16789148 16789244 -86705730 - Lx9 LINE L1 -8 7636 7541 4 713 303 218 29 19 chr15 16789627 16789730 -86705244 - Lx9 LINE L1 -133 7511 7408 4 713 371 274 36 15 chr15 16789722 16789859 -86705115 + Lx9 LINE L1 7282 7421 -223 4 713 1073 126 6 0 chr15 16789942 16790117 -86704857 + (TTTCC)n Simple_repeat Simple_repeat 1 176 0 4 713 638 125 49 0 chr15 16790158 16790302 -86704672 + CT-rich Low_complexity Low_complexity 4 154 0 4 713 33580 80 9 4 chr15 16790317 16795960 -86699014 - L1Md_F2 LINE L1 -2 6580 924 4 713 1528 146 17 81 chr15 16795960 16796304 -86698670 + RLTRETN_Mm LTR ERVK 1 322 0 4 713 6021 120 7 31 chr15 16796304 16796830 -86698144 - L1Md_F2 LINE L1 -5715 923 398 4 713 4594 102 10 22 chr15 16797124 16797187 -86697787 - L1_Mus4 LINE L1 -4 6632 6569 4 713 468 48 0 0 chr15 16797187 16797250 -86697724 + (CAAAA)n Simple_repeat Simple_repeat 2 64 0 4 713 4594 102 10 22 chr15 16797250 16797879 -86697095 - L1_Mus4 LINE L1 -68 6568 5948 4 713 180 300 14 41 chr15 16798558 16798631 -86696343 + L2a LINE L2 3108 3178 -248 4 713 23 54 0 0 chr15 16798904 16798941 -86696033 + AT_rich Low_complexity Low_complexity 1 37 0 4 713 31 76 0 0 chr15 16799072 16799138 -86695836 + AT_rich Low_complexity Low_complexity 1 66 0 4 713 408 210 47 57 chr15 16799319 16799366 -86695608 - ORR1A3 LTR MaLR 0 326 285 4 713 3214 43 8 0 chr15 16799366 16799759 -86695215 - MTA_Mm LTR MaLR 0 396 1 4 713 408 210 47 57 chr15 16799759 16799817 -86695157 - ORR1A3 LTR MaLR -42 284 222 4 713 3358 40 12 0 chr15 16799817 16800222 -86694752 - L1Md_F2 LINE L1 -96 5787 5378 4 713 5862 55 4 3 chr15 16800222 16800968 -86694006 + L1Md_F2 LINE L1 5835 6581 -1 4 713 1354 195 11 66 chr15 16800968 16801254 -86693720 - ORR1A3 LTR MaLR -56 270 1 4 713 385 324 58 12 chr15 16801879 16802051 -86692923 - RMER15 LTR ERVL -17 558 379 4 713 478 108 24 0 chr15 16803477 16803560 -86691414 + (TA)n Simple_repeat Simple_repeat 1 85 0 4 713 331 225 56 0 chr15 16803666 16803755 -86691219 + Lx6 LINE L1 7350 7443 -17 4 713 822 94 0 0 chr15 16803757 16803874 -86691100 + (GAAA)n Simple_repeat Simple_repeat 2 118 0 4 713 375 155 0 0 chr15 16804415 16804499 -86690475 + CT-rich Low_complexity Low_complexity 1 84 0 4 713 315 0 0 0 chr15 16804499 16804534 -86690440 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 713 210 333 14 0 chr15 16804541 16804613 -86690361 - B3A SINE B2 -100 98 26 4 713 1471 242 14 62 chr15 16804610 16804962 -86690012 - ORR1C1 LTR MaLR -8 370 36 4 713 698 276 21 62 chr15 16804957 16805267 -86689707 - RLTR11A LTR ERVK -48 515 221 4 713 653 95 0 8 chr15 16805267 16805384 -86689590 + (TCTA)n Simple_repeat Simple_repeat 3 118 0 4 713 386 326 50 83 chr15 16805384 16805416 -86689558 - RLTR11A LTR ERVK -343 220 189 4 713 244 287 65 65 chr15 16805391 16805499 -86689475 - ID4 SINE ID -30 122 15 4 713 210 220 34 0 chr15 16807179 16807238 -86687736 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 4 713 3572 172 59 59 chr15 16807489 16807619 -86687355 + ORR1A3-int LTR MaLR 1 125 -1838 4 713 2845 102 0 2 chr15 16807619 16808020 -86686954 - MTB LTR MaLR 0 400 1 4 713 3572 172 59 59 chr15 16808020 16808647 -86686327 + ORR1A3-int LTR MaLR 126 758 -1205 4 713 1283 165 55 63 chr15 16808502 16808755 -86686219 + MT2B LTR ERVL 37 287 -314 4 713 3889 163 45 4 chr15 16808715 16809453 -86685521 + ORR1A3-int LTR MaLR 718 1485 -478 4 713 256 250 0 0 chr15 16809466 16809522 -86685452 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 713 714 201 46 58 chr15 16810127 16810301 -86684673 + RMER19B LTR ERVK 308 479 -423 4 713 301 267 74 16 chr15 16811907 16812029 -86682945 + L1M LINE L1 5290 5418 -941 4 713 859 113 193 0 chr15 16812036 16812186 -86682788 + RMER19A LTR ERVK 2 180 -557 4 713 1672 148 45 69 chr15 16812186 16812520 -86682454 - ORR1A3 LTR MaLR 0 326 1 4 713 2111 180 66 7 chr15 16812525 16812950 -86682024 - ORR1A3-int LTR MaLR -5 1958 1509 4 713 565 141 132 8 chr15 16813507 16813636 -86681338 + URR1A DNA MER1_type 82 226 0 4 713 291 275 130 32 chr15 16813636 16813661 -86681313 - CYRA11_Mm Unknown Y-chromosome -301 316 148 4 713 227 215 0 44 chr15 16814071 16814139 -86680835 + (TAA)n Simple_repeat Simple_repeat 1 65 0 4 713 274 324 41 134 chr15 16816267 16816609 -86678365 - ORR1E LTR MaLR -6 353 44 4 713 22 56 0 0 chr15 16817830 16817866 -86677108 + AT_rich Low_complexity Low_complexity 1 36 0 4 713 31685 88 4 7 chr15 16817866 16822881 -86672093 + L1Md_F2 LINE L1 590 5586 -297 4 713 7363 73 8 7 chr15 16822882 16823874 -86671100 + L1Md_F2 LINE L1 5588 6580 -2 4 713 539 296 16 85 chr15 16823991 16824179 -86670795 - B3 SINE B2 -20 175 1 4 713 530 269 33 46 chr15 16824367 16824519 -86670455 + B1_Mur4 SINE Alu 1 150 0 4 713 4214 153 31 30 chr15 16824661 16825505 -86669469 + Lx2B LINE L1 5516 6356 -644 4 713 1337 236 34 40 chr15 16825505 16825965 -86669009 + RLTR20B3 LTR ERVK 1 455 -122 4 713 259 35 88 0 chr15 16825968 16826025 -86668949 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 713 673 314 85 0 chr15 16826275 16826463 -86668511 - B4A SINE B4 -85 207 4 4 713 22 35 0 0 chr15 16826687 16826716 -86668258 + AT_rich Low_complexity Low_complexity 1 29 0 4 713 21 36 0 0 chr15 16827795 16827823 -86667151 + AT_rich Low_complexity Low_complexity 1 28 0 4 713 33 66 0 0 chr15 16827968 16828029 -86666945 + AT_rich Low_complexity Low_complexity 1 61 0 4 713 6541 97 12 9 chr15 16828931 16829890 -86665084 - Lx3_Mus LINE L1 -125 6884 5923 4 713 36 23 0 0 chr15 16830050 16830093 -86664881 + AT_rich Low_complexity Low_complexity 1 43 0 4 713 600 40 0 0 chr15 16830143 16830218 -86664756 + (CA)n Simple_repeat Simple_repeat 2 76 0 4 713 274 292 29 130 chr15 16830237 16830284 -86664690 - B4A SINE B4 -14 278 232 4 713 1247 98 16 11 chr15 16830284 16830469 -86664505 - B2_Mm2 SINE B2 -8 187 2 4 713 274 292 29 130 chr15 16830469 16830559 -86664415 - B4A SINE B4 -61 231 155 4 713 257 271 45 45 chr15 16830850 16830962 -86664012 - Lx7 LINE L1 -607 7089 6978 4 713 400 248 18 9 chr15 16830958 16831068 -86663906 - Lx7 LINE L1 0 7696 7586 4 713 38155 19 0 6 chr15 16831070 16837253 -86657721 - L1Md_A LINE L1 0 6582 440 4 713 1782 244 76 25 chr15 16837269 16838318 -86656656 - Lx7 LINE L1 -1599 6097 5301 4 713 3467 228 55 11 chr15 16838345 16839108 -86655866 - Lx5 LINE L1 0 7050 6254 4 713 1163 174 282 46 chr15 16839108 16839434 -86655540 - RLTR9D LTR ERVK 0 403 1 4 713 408 111 41 14 chr15 16839434 16839507 -86655467 - RLTR45-int LTR ERVK -1 7405 7331 4 713 3860 173 54 60 chr15 16839706 16841790 -86653184 - RLTR45-int LTR ERVK -1812 5432 2396 4 713 7009 169 55 119 chr15 16842070 16843047 -86651927 - RLTR45-int LTR ERVK -3002 4242 3363 4 713 441 54 0 0 chr15 16843047 16843103 -86651871 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 713 7009 174 71 91 chr15 16843103 16844390 -86650584 - RLTR45-int LTR ERVK -3882 3362 2088 4 713 703 259 107 26 chr15 16844406 16844715 -86650259 - ETnERV-int LTR ERVK -2933 381 48 5 713 3053 214 33 21 chr15 16844715 16844762 -86650212 - Lx5 LINE L1 -743 6307 6262 5 713 2334 135 35 25 chr15 16844762 16845165 -86649809 - RLTR9E LTR ERVK 0 409 3 5 713 3053 205 32 18 chr15 16845165 16845991 -86648983 - Lx5 LINE L1 -789 6261 5419 5 713 235 143 50 67 chr15 16845992 16846052 -86648922 - Lx5 LINE L1 -1077 4809 4751 5 713 7881 208 48 72 chr15 16846036 16846388 -86648586 + L1_Mur2 LINE L1 2712 3068 -2809 5 713 2895 113 0 2 chr15 16846388 16846796 -86648178 + MTB_Mm LTR MaLR 1 407 0 5 713 7881 208 48 72 chr15 16846796 16847416 -86647558 + L1_Mur2 LINE L1 3069 3750 -2127 5 713 5689 81 4 9 chr15 16847416 16848193 -86646781 + L1Md_F2 LINE L1 5810 6582 0 5 713 7881 208 48 72 chr15 16848193 16849311 -86645663 + L1_Mur2 LINE L1 3751 4747 -1130 5 713 264 59 0 0 chr15 16849311 16849345 -86645629 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 713 7881 208 48 72 chr15 16849345 16849764 -86645210 + L1_Mur2 LINE L1 4748 5162 -715 5 713 1258 263 89 72 chr15 16849782 16850486 -86644488 - L1_Mur3 LINE L1 -109 5771 5056 5 713 4151 61 29 2 chr15 16852050 16852757 -86642217 - L1_Mus1 LINE L1 0 6567 6003 5 713 188 266 45 30 chr15 16853668 16853734 -86641240 + L3b LINE CR1 316 382 -100 5 713 186 43 0 0 chr15 16854526 16854549 -86640425 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 5 713 1079 72 0 0 chr15 16854565 16854703 -86640271 - B1_Mm SINE Alu -8 139 2 5 713 287 434 0 0 chr15 16855830 16855973 -86639001 + B1F1 SINE Alu 2 144 -5 5 713 609 342 48 16 chr15 16856879 16857194 -86637780 + MER67C LTR ERV1 299 623 -88 5 713 359 309 73 0 chr15 16857253 16857376 -86637598 + MLT1C LTR MaLR 328 459 -8 5 713 2400 108 32 3 chr15 16857911 16858256 -86636718 - Lx2 LINE L1 -425 6572 6218 5 713 24 91 0 0 chr15 16859161 16859227 -86635747 + AT_rich Low_complexity Low_complexity 1 66 0 5 713 295 264 75 0 chr15 16859286 16859392 -86635582 - L1MA5 LINE L1 -50 6250 6137 5 713 337 303 128 56 chr15 16859605 16859801 -86635173 + MTE2b LTR MaLR 139 348 -31 5 713 354 23 0 0 chr15 16861611 16861654 -86633320 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 713 24 32 0 0 chr15 16861996 16862027 -86632947 + AT_rich Low_complexity Low_complexity 1 31 0 5 713 2264 187 100 80 chr15 16862731 16863330 -86631644 + RMER19C LTR ERVK 1 611 0 5 713 644 297 71 116 chr15 16863880 16864345 -86630629 - RLTR12B LTR ERVK -43 485 42 5 713 279 71 0 0 chr15 16864424 16864466 -86630508 + (T)n Simple_repeat Simple_repeat 1 42 0 5 713 477 171 0 0 chr15 16864938 16865026 -86629948 + A-rich Low_complexity Low_complexity 1 88 0 5 713 1166 126 23 6 chr15 16865356 16865531 -86629443 + MERVL-int LTR ERVL 2506 2683 -2802 5 713 966 178 27 11 chr15 16865588 16865746 -86629228 + B2_Mm2 SINE B2 2 158 -37 5 713 315 0 0 0 chr15 16865746 16865781 -86629193 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 5 713 966 178 27 11 chr15 16865781 16865809 -86629165 + B2_Mm2 SINE B2 159 191 -4 5 713 744 177 8 0 chr15 16866256 16866386 -86628588 - L1Md_A LINE L1 -6503 221 91 5 713 10716 61 7 1 chr15 16866388 16867778 -86627196 + L1Md_F3 LINE L1 4188 5586 -297 5 713 8188 39 2 5 chr15 16867779 16868778 -86626196 + L1Md_F3 LINE L1 5588 6583 -1 5 713 7962 45 1 4 chr15 16869456 16870766 -86624208 - L1Md_F2 LINE L1 -12 6570 5265 5 713 186 133 0 0 chr15 16872951 16872981 -86621993 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5 713 189 0 0 0 chr15 16873988 16874009 -86620965 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 5 713 1098 97 0 0 chr15 16874379 16874524 -86620450 + B1_Mus2 SINE Alu 1 145 -2 5 713 387 0 0 0 chr15 16874524 16874567 -86620407 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 713 313 39 0 38 chr15 16874621 16874674 -86620300 + (TTTA)n Simple_repeat Simple_repeat 1 51 0 5 713 1263 96 11 11 chr15 16874674 16874863 -86620111 - L1Md_F2 LINE L1 -40 6542 6354 5 713 3282 62 14 0 chr15 16874863 16875280 -86619694 + L1Md_F2 LINE L1 5929 6351 -231 5 713 856 151 0 0 chr15 16876356 16876495 -86618479 - Lx3B LINE L1 -1002 5971 5833 5 713 2390 166 16 16 chr15 16876495 16876937 -86618037 + Lx3B LINE L1 6528 6969 -4 5 713 205 118 0 73 chr15 16876959 16877014 -86617960 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 5 713 3803 141 157 7 chr15 16877492 16877619 -86617355 - Lx2 LINE L1 0 6997 6867 5 713 2210 87 101 15 chr15 16877619 16877946 -86617028 - RLTR10D LTR ERVK -1 358 4 5 713 3803 141 157 7 chr15 16877946 16878539 -86616435 - Lx2 LINE L1 -131 6866 6169 5 713 4380 16 2 0 chr15 16878539 16879031 -86615943 - MT2_Mm LTR ERVL 0 493 1 5 713 314 0 0 0 chr15 16879031 16879069 -86615905 - MERVL-int LTR ERVL 0 5485 5448 5 713 392 167 46 35 chr15 16879069 16879156 -86615818 - ORR1A3-int LTR MaLR -1323 640 553 5 713 40503 16 14 0 chr15 16879156 16884400 -86610574 - MERVL-int LTR ERVL -125 5360 44 5 713 1592 162 13 22 chr15 16884400 16884443 -86610531 - Lx2 LINE L1 -787 6210 6174 5 713 4368 18 2 0 chr15 16884443 16884935 -86610039 - MT2_Mm LTR ERVL 0 493 1 5 713 1592 162 13 22 chr15 16884935 16885206 -86609768 - Lx2 LINE L1 -824 6173 5899 5 713 3588 178 3 16 chr15 16885202 16885600 -86609374 - Lx2 LINE L1 -136 5741 5348 5 713 3042 23 0 0 chr15 16885600 16885946 -86609028 - ORR1A0 LTR MaLR 0 346 1 5 713 3588 178 3 16 chr15 16885946 16886227 -86608747 - Lx2 LINE L1 -530 5347 5071 5 713 1601 234 8 3 chr15 16886224 16886605 -86608369 + L1_Mur1 LINE L1 4588 4970 -916 5 713 33 0 0 0 chr15 16886944 16886977 -86607997 + AT_rich Low_complexity Low_complexity 1 33 0 5 713 278 380 14 35 chr15 16887179 16887321 -86607653 + B4A SINE B4 144 282 -10 5 713 25 51 0 0 chr15 16887583 16887622 -86607352 + AT_rich Low_complexity Low_complexity 1 39 0 5 713 1150 174 5 0 chr15 16888075 16888270 -86606704 - Lx4B LINE L1 -426 6632 6437 5 713 467 341 28 76 chr15 16888270 16888587 -86606387 - MT2A LTR ERVL -231 302 1 5 713 1214 48 0 0 chr15 16889088 16889235 -86605739 + B1_Mm SINE Alu 1 147 0 5 713 25 31 0 0 chr15 16889235 16889267 -86605707 + AT_rich Low_complexity Low_complexity 1 32 0 5 713 2140 165 306 11 chr15 16889883 16890169 -86604805 + RMER6C LTR ERVK 1 309 -381 5 713 594 51 0 0 chr15 16890169 16890247 -86604727 + (GA)n Simple_repeat Simple_repeat 2 79 0 5 713 2140 165 306 11 chr15 16890247 16890493 -86604481 + RMER6C LTR ERVK 310 689 -1 5 713 396 0 0 0 chr15 16890539 16890583 -86604391 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 713 2927 150 63 4 chr15 16890602 16891156 -86603818 + Lx3A LINE L1 6384 6970 -11 5 713 22 0 0 0 chr15 16891345 16891367 -86603607 + AT_rich Low_complexity Low_complexity 1 22 0 5 713 22 0 0 0 chr15 16892232 16892254 -86602720 + AT_rich Low_complexity Low_complexity 1 22 0 5 713 475 314 29 7 chr15 16892601 16892739 -86602235 + ORR1E LTR MaLR 5 145 -214 5 713 7957 43 5 14 chr15 16893185 16894190 -86600784 - L1Md_F2 LINE L1 0 6582 5587 5 713 420 20 0 0 chr15 16894257 16894306 -86600668 + (TAG)n Simple_repeat Simple_repeat 1 49 0 5 713 26 50 0 0 chr15 16894781 16894821 -86600153 + AT_rich Low_complexity Low_complexity 1 40 0 5 713 337 361 44 33 chr15 16894891 16894977 -86599997 + L1M2 LINE L1 5023 5108 -1035 5 713 653 308 66 22 chr15 16894977 16895339 -86599635 + MTE2a LTR MaLR 1 378 -1 5 713 337 361 44 33 chr15 16895339 16895524 -86599450 + L1M2 LINE L1 5109 5297 -846 5 713 952 296 64 0 chr15 16895599 16895896 -86599078 + MTD LTR MaLR 47 362 -57 5 713 321 135 0 0 chr15 16895900 16895952 -86599022 + (TAA)n Simple_repeat Simple_repeat 1 52 0 5 713 968 250 37 20 chr15 16896069 16896314 -86598660 - RLTR40 LTR ERVK -3 814 566 5 713 847 238 37 120 chr15 16896381 16896730 -86598244 - RLTR40 LTR ERVK -128 689 370 5 713 354 23 0 0 chr15 16896796 16896839 -86598135 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 713 540 120 20 0 chr15 16896839 16896939 -86598035 - Lx3A LINE L1 -11 6970 6869 5 713 331 235 103 47 chr15 16896947 16897054 -86597920 - RLTR40 LTR ERVK -462 355 243 5 713 3495 230 50 36 chr15 16897056 16898168 -86596806 + Lx3C LINE L1 5985 7055 -3 5 713 306 0 0 0 chr15 16898976 16899010 -86595964 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 713 379 321 49 28 chr15 16899983 16900127 -86594847 + B1F2 SINE Alu 3 149 0 5 713 423 119 0 0 chr15 16900395 16900462 -86594512 + (CA)n Simple_repeat Simple_repeat 2 68 0 5 713 225 0 0 0 chr15 16900462 16900486 -86594488 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 713 955 25 16 0 chr15 16900486 16900607 -86594367 + (GA)n Simple_repeat Simple_repeat 2 125 0 5 713 457 323 128 51 chr15 16900608 16900843 -86594131 - B4A SINE B4 -27 265 13 5 713 284 0 0 0 chr15 16902164 16902197 -86592777 - MTB LTR MaLR 0 400 368 5 713 845 70 17 0 chr15 16902196 16902311 -86592663 + MTA_Mm LTR MaLR 280 396 0 5 713 497 118 12 0 chr15 16902493 16902566 -86592408 + (GAAA)n Simple_repeat Simple_repeat 2 74 0 5 713 1172 106 0 6 chr15 16902566 16902746 -86592228 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 5 713 497 118 12 0 chr15 16902746 16902757 -86592217 + (GAAA)n Simple_repeat Simple_repeat 3 13 0 5 713 1133 184 0 51 chr15 16903071 16903306 -86591668 + URR1B DNA MER1_type 1 223 -2 5 713 440 62 16 0 chr15 16903337 16903401 -86591573 + (ATG)n Simple_repeat Simple_repeat 2 66 0 5 713 252 254 27 27 chr15 16903682 16903755 -86591219 - Lx9 LINE L1 -666 6978 6906 5 713 516 199 11 242 chr15 16904148 16904276 -86590698 - B1_Mur2 SINE Alu -5 144 47 5 713 1737 121 7 3 chr15 16904276 16904558 -86590416 - L1_Mus3 LINE L1 0 6638 6356 5 713 516 199 11 242 chr15 16904558 16904615 -86590359 - B1_Mur2 SINE Alu -103 46 2 5 713 237 245 19 0 chr15 16904573 16904626 -86590348 - ID_B1 SINE B4 -100 124 71 5 713 195 292 112 0 chr15 16904638 16904727 -86590247 - L2 LINE L2 -842 2577 2479 5 713 21 36 0 0 chr15 16905064 16905092 -86589882 + AT_rich Low_complexity Low_complexity 1 28 0 5 713 591 108 0 0 chr15 16905117 16905219 -86589755 + (GA)n Simple_repeat Simple_repeat 2 103 0 5 713 31 26 0 0 chr15 16905430 16905468 -86589506 + AT_rich Low_complexity Low_complexity 1 38 0 5 713 7361 83 3 13 chr15 16905473 16905613 -86589361 - L1Md_F2 LINE L1 -2 6580 6445 5 713 6959 60 15 1 chr15 16905613 16906494 -86588480 - RLTR13B1 LTR ERVK 0 893 1 5 89 27840 97 71 10 chr15 16906494 16911839 -86583135 - L1Md_F2 LINE L1 -138 6444 755 5 714 422 238 0 45 chr15 16911836 16911946 -86583028 - L1Md_F2 LINE L1 -5999 617 513 5 714 22 35 0 0 chr15 16912085 16912114 -86582860 + AT_rich Low_complexity Low_complexity 1 29 0 5 714 279 325 0 0 chr15 16913133 16913216 -86581758 + ID_B1 SINE B4 134 216 -8 5 714 3935 107 64 44 chr15 16913893 16914576 -86580398 + Lx3A LINE L1 6278 6974 -7 5 714 197 65 32 0 chr15 16914579 16914610 -86580364 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 714 2437 317 56 48 chr15 16914894 16916117 -86578857 - Lx9 LINE L1 -8 7636 6405 6 714 460 335 33 20 chr15 16916266 16916418 -86578556 - RSINE1 SINE B4 -10 155 2 6 714 207 173 0 0 chr15 16917631 16917683 -86577291 + T-rich Low_complexity Low_complexity 1 52 0 6 714 5496 112 29 26 chr15 16917855 16918753 -86576221 - Lx3_Mus LINE L1 -9 7000 6100 6 714 23 86 0 0 chr15 16919288 16919346 -86575628 + AT_rich Low_complexity Low_complexity 1 58 0 6 714 231 114 0 0 chr15 16920109 16920144 -86574830 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 714 402 300 83 60 chr15 16921393 16921659 -86573315 + Lx8 LINE L1 7199 7470 -3 6 714 990 160 28 6 chr15 16921734 16921916 -86573058 + B2_Mm2 SINE B2 1 186 -9 6 714 26 0 0 0 chr15 16921927 16921953 -86573021 + AT_rich Low_complexity Low_complexity 1 26 0 6 714 21 0 0 0 chr15 16922787 16922808 -86572166 + AT_rich Low_complexity Low_complexity 1 21 0 6 714 292 310 76 48 chr15 16922910 16923385 -86571589 + L1_Mur3 LINE L1 1281 1768 -4112 6 714 269 268 14 0 chr15 16923483 16923554 -86571420 + Lx7 LINE L1 6695 6766 -930 6 714 7638 149 48 12 chr15 16923553 16925367 -86569607 + L1_Mus1 LINE L1 5202 7189 -507 6 714 3208 199 85 99 chr15 16925389 16926375 -86568599 - RLTR25A LTR ERVK -4 1024 1 6 714 7149 105 19 11 chr15 16926414 16927493 -86567481 + L1_Mus3 LINE L1 5565 6631 -7 6 714 40 37 0 0 chr15 16927494 16927548 -86567426 + AT_rich Low_complexity Low_complexity 1 54 0 6 714 476 344 67 37 chr15 16927611 16927885 -86567089 + Lx8 LINE L1 7024 7318 -155 6 714 552 100 0 0 chr15 16927900 16927980 -86566994 + (TTCC)n Simple_repeat Simple_repeat 2 81 0 6 714 1717 288 48 43 chr15 16928076 16928686 -86566288 - Lx9 LINE L1 -710 6934 6322 6 714 685 254 17 0 chr15 16928693 16928870 -86566104 + Lx9 LINE L1 7284 7463 -181 6 714 225 65 0 0 chr15 16928874 16928905 -86566069 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 714 299 253 0 0 chr15 16928926 16929009 -86565965 + Lx9 LINE L1 7562 7644 0 6 714 21 0 0 0 chr15 16929458 16929479 -86565495 + AT_rich Low_complexity Low_complexity 1 21 0 6 714 757 66 0 10 chr15 16930013 16930120 -86564854 + B1_Mus2 SINE Alu 23 146 -1 6 714 2939 96 7 52 chr15 16930192 16930654 -86564320 + L1_Mus2 LINE L1 6126 6566 0 6 714 318 0 0 0 chr15 16930821 16930858 -86564116 + U2 snRNA snRNA 1 37 -151 6 714 400 353 19 13 chr15 16931020 16931178 -86563796 - RSINE1 SINE B4 -2 163 5 6 714 23 0 0 0 chr15 16931280 16931303 -86563671 + AT_rich Low_complexity Low_complexity 1 23 0 6 714 23 33 0 0 chr15 16932125 16932155 -86562819 + AT_rich Low_complexity Low_complexity 1 30 0 6 714 24 53 0 0 chr15 16932259 16932297 -86562677 + AT_rich Low_complexity Low_complexity 1 38 0 6 714 1383 339 92 17 chr15 16932491 16933215 -86561759 - Lx7 LINE L1 -826 6870 6092 6 714 372 211 13 0 chr15 16933425 16933501 -86561473 + RMER6C LTR ERVK 614 690 0 6 714 822 211 251 78 chr15 16933504 16933594 -86561380 - RMER6C LTR ERVK -140 616 535 6 714 279 0 0 0 chr15 16933594 16933625 -86561349 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 714 1408 186 101 76 chr15 16933625 16934074 -86560900 - RMER6C LTR ERVK -222 534 3 6 714 22 0 0 0 chr15 16934293 16934315 -86560659 + AT_rich Low_complexity Low_complexity 1 22 0 6 714 332 196 115 42 chr15 16934719 16934815 -86560159 - L1_Rod LINE L1 -929 4918 4816 6 714 228 302 17 8 chr15 16934829 16934946 -86560028 - Lx9 LINE L1 -1 7643 7526 6 714 399 21 0 0 chr15 16934951 16934999 -86559975 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 714 262 189 19 0 chr15 16935020 16935073 -86559901 + Lx9 LINE L1 7289 7342 -302 6 714 228 135 0 0 chr15 16935136 16935173 -86559801 + (GAA)n Simple_repeat Simple_repeat 2 38 0 6 714 454 239 12 72 chr15 16935183 16935350 -86559624 + Lx9 LINE L1 7350 7506 -138 6 714 483 283 0 13 chr15 16935340 16935494 -86559480 - L1_Rod LINE L1 -1021 4826 4675 6 714 21 36 0 0 chr15 16937257 16937285 -86557689 + AT_rich Low_complexity Low_complexity 1 28 0 6 714 414 39 0 0 chr15 16937410 16937462 -86557512 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 714 3783 260 28 18 chr15 16938558 16939480 -86555494 - Lx5 LINE L1 -3 7047 6117 6 714 1746 252 26 177 chr15 16939487 16940078 -86554896 - L1_Mur2 LINE L1 -240 5640 5217 6 714 5070 99 34 25 chr15 16940078 16940845 -86554129 - L1_Mus4 LINE L1 -5 6631 5858 6 714 1847 237 26 5 chr15 16940845 16941308 -86553666 - L1_Mur2 LINE L1 -660 5217 4746 6 714 2106 119 57 91 chr15 16941310 16941717 -86553257 - RLTR9C LTR ERVK 0 393 1 6 714 468 0 0 0 chr15 16941734 16941786 -86553188 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 714 327 91 0 0 chr15 16941790 16941834 -86553140 - MMETn-int LTR ERVK -32 7374 7331 6 714 3831 184 25 34 chr15 16942050 16943842 -86551132 - MMETn-int LTR ERVK -3321 4085 2356 6 714 3079 49 3 0 chr15 16943906 16944291 -86550683 - L1Md_T LINE L1 0 6582 6197 6 714 1632 40 0 0 chr15 16944291 16944489 -86550485 + L1_Mm LINE L1 4551 4748 -1135 6 714 462 197 49 83 chr15 16944489 16944633 -86550341 + MT2B LTR ERVL 140 278 -323 6 714 966 90 0 15 chr15 16944527 16944662 -86550312 + B1_Mm SINE Alu 15 147 0 6 714 195 42 0 0 chr15 16944669 16944693 -86550281 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 6 714 387 0 0 0 chr15 16944697 16944740 -86550234 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 714 5950 186 47 31 chr15 16944748 16945027 -86549947 - L1_Mur2 LINE L1 -2279 3598 3351 6 714 974 108 0 51 chr15 16945027 16945183 -86549791 - B1_Mus1 SINE Alu 0 148 1 6 714 5950 186 47 31 chr15 16945183 16946317 -86548657 - L1_Mur2 LINE L1 -2527 3350 2163 6 714 2568 215 57 35 chr15 16946322 16946974 -86548000 - RMER6C LTR ERVK -9 681 16 6 714 473 253 87 88 chr15 16947046 16947203 -86547771 + RLTR22_Mur LTR ERVK 410 689 -715 6 714 1085 87 0 0 chr15 16947203 16947341 -86547633 + B1_Mm SINE Alu 1 138 -9 6 714 263 38 36 36 chr15 16947341 16947396 -86547578 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 6 714 515 279 109 71 chr15 16947396 16947772 -86547202 + RLTR22_Mur LTR ERVK 587 1022 -382 6 714 439 211 27 137 chr15 16947800 16948025 -86546949 + RLTR22_Mur LTR ERVK 1193 1347 -501 6 714 384 398 17 13 chr15 16948126 16948365 -86546609 + B4A SINE B4 6 245 -47 6 714 588 53 0 0 chr15 16948423 16948499 -86546475 + (CA)n Simple_repeat Simple_repeat 2 77 0 6 714 261 387 36 108 chr15 16948869 16949063 -86545911 - B4A SINE B4 -109 183 4 6 714 288 208 0 0 chr15 16949105 16949201 -86545773 + GA-rich Low_complexity Low_complexity 1 96 0 6 714 309 373 52 14 chr15 16949457 16949669 -86545305 - MLT2D LTR ERVL -190 224 5 6 714 2175 82 23 0 chr15 16949933 16950236 -86544738 + L1_Mus1 LINE L1 6258 6567 0 6 714 230 220 68 0 chr15 16951489 16951548 -86543426 - B3 SINE B2 0 216 154 6 714 285 29 0 0 chr15 16951558 16951592 -86543382 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 714 22 56 0 0 chr15 16951615 16951651 -86543323 + AT_rich Low_complexity Low_complexity 1 36 0 6 714 3836 156 45 27 chr15 16951665 16952416 -86542558 + RMER12 LTR ERVK 1 765 -557 6 714 613 262 73 86 chr15 16952420 16952654 -86542320 + RMER12 LTR ERVK 951 1181 -141 6 714 243 0 0 0 chr15 16953176 16953203 -86541771 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 6 714 375 41 0 0 chr15 16953207 16953256 -86541718 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 714 23 0 0 0 chr15 16953338 16953361 -86541613 + AT_rich Low_complexity Low_complexity 1 23 0 6 714 762 152 0 81 chr15 16953367 16953539 -86541435 - Lx3B LINE L1 -2 6971 6814 6 714 317 312 41 7 chr15 16953631 16953776 -86541198 - MER2 DNA MER2_type -66 279 130 6 714 1588 127 116 60 chr15 16953786 16954088 -86540886 - ORR1A2 LTR MaLR -8 319 1 6 714 477 76 0 0 chr15 16954329 16954395 -86540579 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 714 333 47 0 0 chr15 16954463 16954506 -86540468 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 714 450 321 69 29 chr15 16954531 16954807 -86540167 - B4A SINE B4 -2 290 4 6 714 270 341 60 75 chr15 16955109 16955242 -86539732 + B4 SINE B4 81 211 -81 6 714 22 35 0 0 chr15 16955422 16955451 -86539523 + AT_rich Low_complexity Low_complexity 1 29 0 6 714 25 0 0 0 chr15 16955996 16956021 -86538953 + AT_rich Low_complexity Low_complexity 1 25 0 6 714 305 352 39 21 chr15 16956074 16956473 -86538501 - L1M2 LINE L1 -882 4995 4610 6 714 1747 73 22 0 chr15 16956828 16957060 -86537914 + L1_Mus1 LINE L1 6330 6566 -1 6 714 180 77 0 0 chr15 16957065 16957091 -86537883 + (A)n Simple_repeat Simple_repeat 1 26 0 6 714 5842 110 14 10 chr15 16957091 16958019 -86536955 - MusHAL1 LINE L1 -959 1753 822 6 714 3458 155 0 0 chr15 16958010 16958589 -86536385 + Lx LINE L1 4683 5261 -622 6 714 8064 9 0 0 chr15 16958589 16959498 -86535476 + L1Md_A LINE L1 4678 5586 -297 6 714 8994 3 0 0 chr15 16959498 16960494 -86534480 + L1Md_A LINE L1 5587 6582 0 6 714 186 43 0 0 chr15 16960510 16960533 -86534441 + (A)n Simple_repeat Simple_repeat 1 23 0 6 714 6343 147 23 7 chr15 16960533 16961910 -86533064 + Lx LINE L1 5252 6653 -1 6 714 505 280 63 18 chr15 16962393 16962615 -86532359 + L1MC LINE L1 4962 5193 -953 6 714 476 341 88 56 chr15 16962638 16963172 -86531802 + L1MC LINE L1 5254 5804 -529 6 714 335 314 88 78 chr15 16963780 16964074 -86530900 - LTR37B LTR ERV1 -10 458 162 6 714 192 77 0 0 chr15 16964254 16964280 -86530694 + (TA)n Simple_repeat Simple_repeat 2 27 0 6 714 461 324 110 15 chr15 16964283 16964546 -86530428 - B4 SINE B4 -1 291 4 6 714 232 366 10 29 chr15 16964617 16964639 -86530335 - B4 SINE B4 -1 291 271 6 714 315 122 0 0 chr15 16964639 16964688 -86530286 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 714 232 366 10 29 chr15 16964688 16964769 -86530205 - B4 SINE B4 -22 270 190 6 714 1882 145 15 47 chr15 16964995 16965335 -86529639 - ORR1A4 LTR MaLR 0 329 1 6 714 8354 179 34 104 chr15 16965337 16967439 -86527535 - ORR1A4-int LTR MaLR -2 1961 6 6 714 27 29 0 0 chr15 16967492 16967526 -86527448 + AT_rich Low_complexity Low_complexity 1 34 0 6 714 671 218 6 29 chr15 16967624 16967799 -86527175 + L1_Mur3 LINE L1 2484 2654 -3226 6 714 1388 174 53 3 chr15 16967779 16968062 -86526912 + L1_Mur3 LINE L1 2446 2742 -3138 6 714 667 198 22 11 chr15 16968060 16968251 -86526723 - L1_Mur3 LINE L1 -1271 4609 4417 6 714 835 250 11 0 chr15 16968252 16968600 -86526374 + L1_Mur3 LINE L1 5087 5543 -337 6 714 5321 159 63 16 chr15 16968599 16970022 -86524952 + L1Md_F2 LINE L1 1 1482 -4401 6 714 23036 93 4 5 chr15 16970016 16973338 -86521636 + L1Md_F2 LINE L1 2269 5586 -297 6 714 7463 68 4 11 chr15 16973339 16974328 -86520646 + L1Md_F2 LINE L1 5588 6569 -13 6 714 22 56 0 0 chr15 16974774 16974810 -86520164 + AT_rich Low_complexity Low_complexity 1 36 0 6 714 1374 268 3 12 chr15 16976683 16977012 -86517962 + Lx7 LINE L1 6224 6549 -1147 7 714 2840 113 0 19 chr15 16977021 16977437 -86517537 - L1_Mm LINE L1 -175 5708 5301 7 714 6804 152 51 3 chr15 16977437 16978650 -86516324 + L1_Mur2 LINE L1 4032 5302 -575 7 714 2072 181 40 35 chr15 16978650 16979080 -86515894 + RLTR22_Mur LTR ERVK 267 698 -1150 7 714 613 282 200 32 chr15 16979085 16979400 -86515574 + RLTR9A LTR ERVK 1 368 0 7 714 2828 215 62 70 chr15 16979528 16980444 -86514530 + RLTR22_Mur LTR ERVK 925 1633 -215 7 714 282 207 41 61 chr15 16980530 16980650 -86514324 + MTEa LTR MaLR 240 350 -29 7 714 360 0 0 0 chr15 16980663 16980703 -86514271 + (CATAT)n Simple_repeat Simple_repeat 2 41 0 7 714 222 91 0 0 chr15 16980703 16980736 -86514238 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 7 714 618 227 48 24 chr15 16980822 16980989 -86513985 - URR1B DNA MER1_type 0 225 55 7 714 285 214 45 0 chr15 16981192 16981346 -86513628 + (TA)n Simple_repeat Simple_repeat 1 160 0 7 714 1007 306 93 29 chr15 16981443 16982305 -86512669 + L1_Mur3 LINE L1 3948 4864 -1016 7 714 1232 200 23 24 chr15 16983309 16983802 -86511172 + L1_Mur3 LINE L1 984 1477 -4400 7 714 227 122 0 24 chr15 16983801 16983843 -86511131 + Lx5 LINE L1 5410 5450 -427 7 714 1003 192 74 33 chr15 16983846 16984061 -86510913 - Lx4B LINE L1 -382 6676 6453 7 714 1635 215 37 15 chr15 16984060 16984429 -86510545 + Lx4B LINE L1 6691 7041 -17 7 714 6439 208 20 22 chr15 16984435 16986031 -86508943 + Lx5 LINE L1 5443 7044 -6 7 714 1121 349 86 48 chr15 16986045 16986683 -86508291 + Lx8 LINE L1 6257 6913 -560 7 714 3881 127 31 0 chr15 16986683 16987298 -86507676 - Lx2 LINE L1 -1 6996 6363 7 714 1121 349 86 48 chr15 16987298 16987495 -86507479 + Lx8 LINE L1 6914 7124 -349 7 714 287 363 10 85 chr15 16988328 16988527 -86506447 - Lx8 LINE L1 -781 6692 6509 7 714 28 48 0 0 chr15 16988859 16988901 -86506073 + AT_rich Low_complexity Low_complexity 1 42 0 7 714 213 162 0 42 chr15 16990532 16990603 -86504371 + A-rich Low_complexity Low_complexity 2 69 0 7 714 381 22 0 0 chr15 16990642 16990688 -86504286 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 714 405 199 22 58 chr15 16990977 16991116 -86503858 - Lx3C LINE L1 -6 6970 6837 7 714 6169 169 32 7 chr15 16991634 16992841 -86502133 - Lx4B LINE L1 -338 5539 4302 7 714 5219 229 17 9 chr15 16992839 16994228 -86500746 + Lx4B LINE L1 5548 7057 -1 7 714 316 260 62 23 chr15 16994264 16994394 -86500580 - L1MA6 LINE L1 -34 6266 6132 7 714 778 171 0 7 chr15 16994462 16994603 -86500371 + URR1B DNA MER1_type 86 225 0 7 714 21 36 0 0 chr15 16994625 16994653 -86500321 + AT_rich Low_complexity Low_complexity 1 28 0 7 714 239 355 9 43 chr15 16995448 16995563 -86499411 - Lx8 LINE L1 -153 7320 7210 7 714 348 223 0 0 chr15 16995596 16995699 -86499275 + T-rich Low_complexity Low_complexity 1 103 0 7 714 246 276 216 0 chr15 16995742 16995858 -86499116 - Lx7 LINE L1 -597 7099 6959 7 714 297 0 0 0 chr15 16995875 16995908 -86499066 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 714 791 325 107 16 chr15 16996063 16996510 -86498464 - Lx8 LINE L1 -729 6744 6257 7 714 742 206 26 86 chr15 16997102 16997335 -86497639 + MTC-int LTR MaLR 886 1104 -154 7 714 4415 216 49 87 chr15 16997335 16998600 -86496374 - Lx2B LINE L1 -12 6988 5772 7 714 749 186 37 12 chr15 16998600 16998763 -86496211 + MTC-int LTR MaLR 1085 1251 -7 7 714 1940 218 19 12 chr15 16998770 16999188 -86495786 + MTC LTR MaLR 1 421 0 7 714 622 114 26 0 chr15 17001065 17001179 -86493795 + (TCTA)n Simple_repeat Simple_repeat 2 118 0 1 714 1049 305 42 95 chr15 17001276 17002759 -86492215 + Lx7 LINE L1 915 2318 -3562 2 714 2567 255 88 25 chr15 17002760 17003785 -86491189 + Lx7 LINE L1 4934 6008 -1688 2 714 2193 202 68 26 chr15 17003788 17003890 -86491084 + L1_Mur3 LINE L1 1949 2055 -3825 3 714 351 0 0 0 chr15 17003890 17003929 -86491045 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 714 2193 202 68 26 chr15 17003929 17004255 -86490719 + L1_Mur3 LINE L1 2056 2406 -3474 3 714 1310 111 16 0 chr15 17004255 17004445 -86490529 - B2_Mm2 SINE B2 -1 194 2 5 714 2193 202 68 26 chr15 17004445 17004599 -86490375 + L1_Mur3 LINE L1 2407 2556 -3324 3 714 5396 76 0 3 chr15 17004590 17005300 -86489674 - L1_Mm LINE L1 -238 5645 4938 6 714 3302 66 5 11 chr15 17005301 17005745 -86489229 + L1Md_F2 LINE L1 6142 6582 0 7 714 1660 206 45 91 chr15 17005745 17006339 -86488635 + L1_Mur3 LINE L1 2541 3107 -2773 3 714 623 194 32 0 chr15 17006341 17006496 -86488478 + L1_Mur3 LINE L1 3313 3472 -2408 3 714 432 248 18 0 chr15 17006491 17006600 -86488374 + L1_Mur1 LINE L1 1 111 -6871 8 714 1891 212 6 19 chr15 17006613 17007008 -86487966 - Lx3C LINE L1 -93 6965 6483 9 714 1844 154 96 14 chr15 17007007 17007418 -86487556 + Lx3C LINE L1 5478 5926 -1050 1 714 1190 191 103 15 chr15 17007415 17007686 -86487288 + Lx3C LINE L1 6181 6475 -501 1 714 26 0 0 0 chr15 17007834 17007860 -86487114 + AT_rich Low_complexity Low_complexity 1 26 0 1 714 21 36 0 0 chr15 17007985 17008013 -86486961 + AT_rich Low_complexity Low_complexity 1 28 0 1 714 15370 98 18 6 chr15 17008552 17011719 -86483255 + L1Md_F2 LINE L1 382 5586 -297 1 714 7342 75 4 7 chr15 17011720 17012705 -86482269 + L1Md_F2 LINE L1 5588 6569 -13 1 714 23 33 0 0 chr15 17012954 17012984 -86481990 + AT_rich Low_complexity Low_complexity 1 30 0 1 714 1096 263 35 117 chr15 17013813 17014239 -86480735 + MTD LTR MaLR 9 399 -20 1 714 481 353 73 8 chr15 17014442 17014610 -86480364 - Lx8 LINE L1 -141 7332 7149 1 714 198 0 0 0 chr15 17014610 17014632 -86480342 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 714 481 353 73 8 chr15 17014632 17014697 -86480277 - Lx8 LINE L1 -325 7148 7084 1 714 180 0 0 0 chr15 17014734 17014754 -86480220 + (T)n Simple_repeat Simple_repeat 1 20 0 1 714 1066 109 0 0 chr15 17014754 17014901 -86480073 - B1_Mus2 SINE Alu 0 147 1 1 714 1055 107 0 6 chr15 17014911 17015080 -86479894 - L1_Mus4 LINE L1 -6 6630 6463 2 714 677 90 0 0 chr15 17015083 17015172 -86479802 + Lx2 LINE L1 6709 6797 -200 2 714 1682 322 50 23 chr15 17015190 17015772 -86479202 - Lx8 LINE L1 -441 7032 6427 1 714 396 0 0 0 chr15 17015772 17015816 -86479158 + (TA)n Simple_repeat Simple_repeat 1 44 0 2 714 1682 322 50 23 chr15 17015816 17016053 -86478921 - Lx8 LINE L1 -1047 6426 6191 1 714 658 304 24 0 chr15 17016065 17016272 -86478702 - B3 SINE B2 -3 213 2 2 714 266 0 0 29 chr15 17016888 17016923 -86478051 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 2 714 514 0 0 0 chr15 17016938 17017002 -86477972 - L1Md_T LINE L1 0 6582 6519 2 714 625 208 30 15 chr15 17017002 17017125 -86477849 - B1_Mm SINE Alu -12 135 10 2 714 3125 45 0 0 chr15 17017394 17017774 -86477200 + L1Md_F3 LINE L1 6191 6570 -14 2 714 2707 110 8 0 chr15 17018532 17018933 -86476041 - RLTR9E LTR ERVK -5 404 1 2 714 514 41 25 63 chr15 17018933 17019012 -86475962 - ETnERV2-int LTR ERVK 0 7406 7331 2 714 15212 203 47 33 chr15 17019230 17021392 -86473582 - ETnERV2-int LTR ERVK -984 6422 3960 2 714 180 220 47 78 chr15 17021392 17021456 -86473518 + L4 LINE RTE 737 798 -1231 2 714 15212 203 47 33 chr15 17021456 17024928 -86470046 - ETnERV2-int LTR ERVK -984 3959 2 2 714 3006 83 2 10 chr15 17024929 17025341 -86469633 - RLTR9E LTR ERVK 0 409 1 2 714 22 0 0 0 chr15 17025516 17025538 -86469436 + AT_rich Low_complexity Low_complexity 1 22 0 3 714 1344 214 75 14 chr15 17025727 17026007 -86468967 - ORR1C1 LTR MaLR -2 376 80 3 714 721 259 25 0 chr15 17026011 17026212 -86468762 - Lx5 LINE L1 0 7050 6845 3 714 448 226 20 0 chr15 17026213 17026315 -86468659 - ORR1C1 LTR MaLR -272 106 3 3 714 2719 73 2 59 chr15 17027125 17027546 -86467428 + L1_Mus2 LINE L1 6169 6565 -1 3 714 22 0 0 0 chr15 17029352 17029374 -86465600 + AT_rich Low_complexity Low_complexity 1 22 0 3 714 551 92 11 0 chr15 17029738 17029825 -86465149 + (TTTC)n Simple_repeat Simple_repeat 1 88 0 3 714 249 155 0 0 chr15 17031370 17031428 -86463546 + T-rich Low_complexity Low_complexity 1 58 0 3 714 858 78 0 30 chr15 17031428 17031560 -86463414 - B1_Mm SINE Alu 0 147 20 3 714 193 172 31 0 chr15 17031638 17031702 -86463272 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 3 714 189 267 32 48 chr15 17032680 17032743 -86462231 + MIRc SINE MIR 132 193 -75 3 714 354 169 0 0 chr15 17032743 17032808 -86462166 + GA-rich Low_complexity Low_complexity 2 66 0 4 714 4296 119 5 22 chr15 17033941 17034611 -86460363 - L1_Mus3 LINE L1 -9 6629 5972 4 714 3207 78 10 6 chr15 17034611 17035191 -86459783 + L1_Mus3 LINE L1 5380 5969 -597 4 714 227 254 0 43 chr15 17035196 17035266 -86459708 - ORR1C1 LTR MaLR 0 378 312 4 714 316 246 34 5 chr15 17035263 17035345 -86459629 + ORR1C2 LTR MaLR 183 307 -77 4 714 243 0 0 0 chr15 17036055 17036082 -86458892 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 714 1373 286 36 136 chr15 17036720 17037517 -86457457 + Lx7 LINE L1 6977 7694 -2 4 89 968 305 58 19 chr15 17039108 17039727 -86455247 + L1_Rod LINE L1 1569 2211 -3636 4 715 1814 147 51 3 chr15 17039729 17040044 -86454930 + Lx2 LINE L1 6668 6997 0 4 715 1190 83 0 11 chr15 17040046 17040228 -86454746 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 715 690 87 0 0 chr15 17040228 17040331 -86454643 + (GGAA)n Simple_repeat Simple_repeat 1 103 0 4 715 462 237 41 106 chr15 17040334 17040504 -86454470 + L1_Rod LINE L1 2198 2356 -3491 4 715 226 87 43 0 chr15 17040547 17040593 -86454381 + (TTTTTA)n Simple_repeat Simple_repeat 3 50 0 5 715 241 294 0 23 chr15 17041021 17041108 -86453866 - L1_Mm LINE L1 -444 5439 5355 5 715 319 331 0 108 chr15 17041111 17041277 -86453697 - B1_Mur4 SINE Alu 0 150 3 5 715 819 295 68 59 chr15 17041383 17041956 -86453018 - L1M2 LINE L1 -876 5267 4690 5 715 180 0 0 0 chr15 17042448 17042468 -86452506 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5 715 23 33 0 0 chr15 17042704 17042734 -86452240 + AT_rich Low_complexity Low_complexity 1 30 0 5 715 344 359 113 52 chr15 17042775 17043163 -86451811 - MLT1E1A LTR MaLR -55 625 214 5 715 1117 138 0 6 chr15 17043403 17043578 -86451396 + ORR1A3 LTR MaLR 153 326 0 5 715 879 302 54 42 chr15 17043578 17043895 -86451079 - ORR1D1 LTR MaLR -49 325 5 5 715 21 0 0 0 chr15 17044477 17044498 -86450476 + AT_rich Low_complexity Low_complexity 1 21 0 5 715 302 277 92 33 chr15 17044831 17044984 -86449990 - L1MEg LINE L1 -4119 1965 1804 6 715 326 345 0 0 chr15 17044984 17045068 -86449906 + polypyrimidine Low_complexity Low_complexity 5 88 0 6 715 189 0 0 0 chr15 17045346 17045367 -86449607 + (TTG)n Simple_repeat Simple_repeat 1 21 0 6 715 441 0 0 0 chr15 17045914 17045963 -86449011 + (TA)n Simple_repeat Simple_repeat 2 50 0 6 715 255 266 12 31 chr15 17047164 17047249 -86447725 + B1_Mm SINE Alu 51 136 -13 6 715 25 0 0 0 chr15 17047334 17047359 -86447615 + AT_rich Low_complexity Low_complexity 1 25 0 6 715 238 366 10 25 chr15 17047598 17047794 -86447180 - Lx7 LINE L1 -505 7191 6999 6 715 4746 163 38 5 chr15 17047811 17048693 -86446281 - Lx4B LINE L1 -1412 5646 4728 6 715 233 171 0 0 chr15 17048686 17048727 -86446247 + Lx4B LINE L1 6545 6585 -473 6 715 304 377 0 20 chr15 17049268 17049417 -86445557 + MIRb SINE MIR 77 222 -46 6 715 240 35 0 0 chr15 17049953 17049982 -86444992 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 715 531 0 0 0 chr15 17049982 17050040 -86444934 + (GA)n Simple_repeat Simple_repeat 2 60 0 7 715 27 49 0 0 chr15 17050215 17050256 -86444718 + AT_rich Low_complexity Low_complexity 1 41 0 7 715 189 74 0 0 chr15 17051100 17051127 -86443847 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 7 715 800 242 87 5 chr15 17051145 17051340 -86443634 + Lx7 LINE L1 6644 6854 -842 7 715 234 91 0 0 chr15 17051588 17051632 -86443342 + Lx LINE L1 6611 6654 0 7 715 305 221 0 0 chr15 17052351 17052419 -86442555 - Lx9 LINE L1 -11 7633 7566 7 715 444 105 0 0 chr15 17052428 17052504 -86442470 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 7 715 1354 229 36 44 chr15 17052505 17052866 -86442108 - Lx9 LINE L1 -172 7472 7115 7 715 405 0 0 0 chr15 17053001 17053046 -86441928 + (TAA)n Simple_repeat Simple_repeat 1 45 0 7 715 329 338 0 15 chr15 17053162 17053297 -86441677 - Lx7 LINE L1 -977 6719 6587 7 715 2327 314 82 23 chr15 17053291 17054475 -86440499 - Lx7 LINE L1 -380 7316 6064 8 715 1980 167 41 35 chr15 17054533 17055045 -86439929 + RMER2 LTR ERV1 12 567 0 8 715 264 266 19 105 chr15 17055959 17056064 -86438910 - B4 SINE B4 0 292 197 8 715 432 0 0 0 chr15 17056064 17056112 -86438862 + (TC)n Simple_repeat Simple_repeat 2 49 0 8 715 285 309 17 53 chr15 17056133 17056266 -86438708 - B4A SINE B4 -148 144 14 8 715 1469 121 0 9 chr15 17056272 17056497 -86438477 - Lx2 LINE L1 0 6997 6775 8 715 3745 120 2 0 chr15 17056492 17057041 -86437933 - Lx2 LINE L1 -349 6648 6099 8 715 235 218 117 0 chr15 17058417 17058485 -86436489 - B1F SINE Alu -1 148 43 8 715 241 217 15 115 chr15 17058659 17058789 -86436185 - Lx9 LINE L1 -25 7619 7503 8 715 604 222 20 86 chr15 17058793 17058990 -86435984 - RMER10B LTR ERVL 0 398 215 8 715 919 276 39 25 chr15 17058996 17059278 -86435696 - RMER10A LTR ERVL -156 286 1 8 715 773 194 6 0 chr15 17059434 17059604 -86435370 + (TA)n Simple_repeat Simple_repeat 1 171 0 8 715 764 229 93 45 chr15 17059625 17059915 -86435059 - RLTR19-int LTR ERVK -334 2904 2627 9 715 1456 215 91 13 chr15 17060122 17060508 -86434466 - RLTR19-int LTR ERVK -3130 3007 2592 9 715 495 181 146 0 chr15 17060517 17060661 -86434313 - RLTR19-int LTR ERVK -4797 1340 1176 9 715 1507 48 21 0 chr15 17061435 17061622 -86433352 - B2_Mm1t SINE B2 -1 192 2 9 715 1475 202 31 114 chr15 17061656 17062076 -86432898 - RMER10B LTR ERVL -6 392 8 9 715 653 167 8 0 chr15 17062108 17062234 -86432740 - Lx2B LINE L1 0 7000 6874 9 715 21 36 0 0 chr15 17062343 17062371 -86432603 + AT_rich Low_complexity Low_complexity 1 28 0 9 715 224 77 26 0 chr15 17062985 17063024 -86431950 + (CAAA)n Simple_repeat Simple_repeat 3 42 0 9 715 1487 86 24 0 chr15 17063185 17063395 -86431579 - L1_Mur1 LINE L1 -1047 4839 4625 9 715 6059 138 44 25 chr15 17063395 17064458 -86430516 + Lx3_Mus LINE L1 5927 7009 0 9 715 21 0 0 0 chr15 17064483 17064504 -86430470 + AT_rich Low_complexity Low_complexity 1 21 0 9 715 869 326 53 0 chr15 17065454 17065755 -86429219 + MTE-int LTR MaLR 93 409 -1171 9 715 216 172 0 72 chr15 17065953 17066022 -86428952 + T-rich Low_complexity Low_complexity 3 66 0 1 715 454 422 90 13 chr15 17066086 17066563 -86428411 + MTE-int LTR MaLR 830 1343 -237 9 715 222 246 15 0 chr15 17066566 17066631 -86428343 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 715 22 70 0 0 chr15 17067270 17067313 -86427661 + AT_rich Low_complexity Low_complexity 1 43 0 1 715 23 68 0 0 chr15 17067584 17067628 -86427346 + AT_rich Low_complexity Low_complexity 1 44 0 1 715 10821 45 1 10 chr15 17067934 17069985 -86424989 - L1Md_F2 LINE L1 -6 6576 4551 1 715 4312 48 0 0 chr15 17070300 17070817 -86424157 + L1Md_T LINE L1 6065 6581 -1 1 715 314 273 79 72 chr15 17070852 17071332 -86423642 + L1_Rod LINE L1 1099 1563 -4284 1 715 403 231 32 32 chr15 17071332 17071426 -86423548 + B1_Mur4 SINE Alu 56 149 -1 1 715 450 220 106 7 chr15 17071432 17071574 -86423400 + L1_Rod LINE L1 1550 1705 -4142 1 715 363 23 0 0 chr15 17071676 17071720 -86423254 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 715 24 32 0 0 chr15 17072066 17072097 -86422877 + AT_rich Low_complexity Low_complexity 1 31 0 1 715 728 36 27 0 chr15 17072894 17073006 -86421968 - L1Md_F3 LINE L1 0 6584 6470 1 715 21 71 0 0 chr15 17074241 17074283 -86420691 + AT_rich Low_complexity Low_complexity 1 42 0 1 715 26 0 0 0 chr15 17074934 17074960 -86420014 + AT_rich Low_complexity Low_complexity 1 26 0 1 715 23 54 0 0 chr15 17075332 17075369 -86419605 + AT_rich Low_complexity Low_complexity 1 37 0 1 715 315 0 0 0 chr15 17076390 17076425 -86418549 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 715 2335 239 50 38 chr15 17076440 17077135 -86417839 - L1_Mur3 LINE L1 -3707 2173 1449 1 715 514 28 14 14 chr15 17077135 17077208 -86417766 + (TCTA)n Simple_repeat Simple_repeat 1 73 0 1 715 2335 239 49 37 chr15 17077208 17077478 -86417496 - L1_Mur3 LINE L1 -4432 1448 1197 1 715 215 178 68 0 chr15 17077601 17077674 -86417300 + (CAA)n Simple_repeat Simple_repeat 1 78 0 1 715 299 211 189 0 chr15 17077680 17077770 -86417204 - Lx6 LINE L1 -239 7221 7115 1 715 255 238 96 36 chr15 17077773 17077856 -86417118 - RLTR23 LTR ERV1 0 430 343 1 715 4761 156 67 24 chr15 17078269 17079082 -86415892 + L1_Mur1 LINE L1 3 1196 -5788 1 715 798 89 0 0 chr15 17079082 17079194 -86415780 + (GGA)n Simple_repeat Simple_repeat 3 114 0 1 715 7069 104 5 1 chr15 17079194 17080277 -86414697 + L1_Mur1 LINE L1 1212 2298 -3588 1 715 5704 111 19 7 chr15 17080274 17081162 -86413812 + L1_Mur1 LINE L1 4300 5198 -688 1 715 2986 147 4 32 chr15 17081188 17081721 -86413253 + Lx3A LINE L1 6464 6981 0 1 715 3501 205 69 38 chr15 17081739 17082882 -86412092 + L1_Mur3 LINE L1 2783 3961 -1919 1 715 843 236 123 29 chr15 17082914 17083224 -86411750 + Lx7 LINE L1 7357 7695 -1 1 715 518 254 0 0 chr15 17083398 17083508 -86411466 - Lx5 LINE L1 -252 6798 6689 1 715 26 0 0 0 chr15 17084467 17084493 -86410481 + AT_rich Low_complexity Low_complexity 1 26 0 1 715 9041 1 0 0 chr15 17085484 17086649 -86408325 - L1Md_A LINE L1 0 6582 5418 1 715 2940 24 0 0 chr15 17086649 17086986 -86407988 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 715 55332 21 17 6 chr15 17086986 17093387 -86401587 - IAPEz-int LTR ERVK 0 6481 8 1 715 2940 24 0 0 chr15 17093387 17093724 -86401250 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 715 36903 7 0 1 chr15 17093724 17099356 -86395618 - L1Md_A LINE L1 -460 5423 1 1 715 200 116 0 65 chr15 17099364 17099410 -86395564 + T-rich Low_complexity Low_complexity 3 45 0 1 715 904 230 90 52 chr15 17100155 17100444 -86394530 - Lx4B LINE L1 -2 7056 6757 1 715 467 210 49 7 chr15 17100517 17100661 -86394313 - L1_Mur3 LINE L1 -4256 1624 1475 1 715 293 262 31 0 chr15 17100661 17100781 -86394193 - L1_Mur3 LINE L1 -4523 1357 1234 1 715 237 65 0 0 chr15 17100781 17100812 -86394162 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 1 715 2328 167 66 20 chr15 17100820 17101261 -86393713 - Lx3A LINE L1 -5 6976 6516 1 715 638 115 10 0 chr15 17101268 17101364 -86393610 + L1_Mur1 LINE L1 970 1066 -5916 1 715 1962 225 125 75 chr15 17101365 17102062 -86392912 - Lx4B LINE L1 -323 6735 6004 1 715 25 31 0 0 chr15 17102168 17102200 -86392774 + AT_rich Low_complexity Low_complexity 1 32 0 1 715 21 36 0 0 chr15 17104002 17104030 -86390944 + AT_rich Low_complexity Low_complexity 1 28 0 1 715 1330 274 120 63 chr15 17104689 17105422 -86389552 - ORR1C2-int LTR MaLR -573 797 1 1 715 1175 214 84 73 chr15 17105430 17105788 -86389186 - ORR1C2 LTR MaLR -8 376 15 1 715 307 264 0 0 chr15 17105799 17105871 -86389103 + MTC-int LTR MaLR 1187 1258 0 1 715 1396 246 11 90 chr15 17105872 17106328 -86388646 + MTC LTR MaLR 2 421 0 1 715 232 102 41 0 chr15 17106443 17106492 -86388482 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 715 2164 164 5 37 chr15 17106493 17106903 -86388071 - MTB_Mm LTR MaLR -4 403 7 1 715 311 362 71 10 chr15 17107231 17107429 -86387545 - MER77 LTR ERVL -52 555 346 1 715 324 15 0 9 chr15 17108038 17108084 -86386890 - L1Md_F2 LINE L1 -12 5871 5828 1 715 1250 95 0 10 chr15 17108084 17108276 -86386698 + L1Md_F2 LINE L1 6381 6570 -12 1 715 26 0 0 0 chr15 17108543 17108569 -86386405 + AT_rich Low_complexity Low_complexity 1 26 0 1 715 216 171 0 0 chr15 17108776 17108817 -86386157 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 715 21 0 0 0 chr15 17109066 17109087 -86385887 + AT_rich Low_complexity Low_complexity 1 21 0 1 715 372 94 0 0 chr15 17109411 17109464 -86385510 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 715 1020 320 39 39 chr15 17111046 17111736 -86383238 + MERVL_2A-int LTR ERVL 175 927 -4834 1 715 573 259 18 87 chr15 17111749 17111962 -86383012 + MTD LTR MaLR 228 412 -7 1 715 3099 51 2 15 chr15 17112180 17112581 -86382393 + MTA_Mm LTR MaLR 1 396 0 1 715 30668 89 10 7 chr15 17113132 17117773 -86377201 + L1Md_F2 LINE L1 947 5585 -298 1 715 7053 90 0 6 chr15 17117774 17118762 -86376212 + L1Md_F2 LINE L1 5587 6568 -14 1 715 11450 28 1 1 chr15 17119347 17120714 -86374260 + L1Md_A LINE L1 4220 5586 -297 1 715 8311 34 0 0 chr15 17120715 17121706 -86373268 + L1Md_A LINE L1 5588 6578 -4 1 715 184 30 61 0 chr15 17121957 17121990 -86372984 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 715 22 56 0 0 chr15 17122908 17122944 -86372030 + AT_rich Low_complexity Low_complexity 1 36 0 1 715 373 370 60 11 chr15 17123238 17123421 -86371553 + B3A SINE B2 2 193 -5 1 715 2814 52 0 3 chr15 17123635 17123982 -86370992 + ORR1A1 LTR MaLR 1 346 0 1 715 29 70 0 0 chr15 17124260 17124317 -86370657 + AT_rich Low_complexity Low_complexity 1 57 0 1 715 21 57 0 0 chr15 17124433 17124468 -86370506 + AT_rich Low_complexity Low_complexity 1 35 0 1 715 23 0 0 0 chr15 17124504 17124527 -86370447 + AT_rich Low_complexity Low_complexity 1 23 0 1 715 495 399 14 14 chr15 17125093 17125314 -86369660 - ID_B1 SINE B4 0 224 4 1 715 555 339 93 32 chr15 17125403 17125811 -86369163 + L1M4c LINE L1 85 517 -5867 1 715 557 61 12 0 chr15 17125866 17125948 -86369026 + (CA)n Simple_repeat Simple_repeat 2 84 0 1 715 495 0 0 0 chr15 17125948 17126002 -86368972 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 715 297 318 107 45 chr15 17126272 17126654 -86368320 + L1M4c LINE L1 777 1182 -5202 1 715 23 0 0 0 chr15 17126688 17126711 -86368263 + AT_rich Low_complexity Low_complexity 1 23 0 1 715 985 284 55 20 chr15 17126750 17127152 -86367822 - Lx6 LINE L1 -1115 6345 5930 1 715 23 33 0 0 chr15 17127286 17127316 -86367658 + AT_rich Low_complexity Low_complexity 1 30 0 1 715 1076 308 22 28 chr15 17127340 17127704 -86367270 + ORR1D1 LTR MaLR 1 362 -12 1 715 1153 62 7 0 chr15 17128982 17129127 -86365847 - B1_Mm SINE Alu 0 147 2 1 715 797 121 0 15 chr15 17129427 17129561 -86365413 + (TTC)n Simple_repeat Simple_repeat 2 133 0 1 715 325 299 101 27 chr15 17129709 17129857 -86365117 + RMER5 LTR ERV1 349 507 -27 1 715 408 71 0 0 chr15 17129866 17129922 -86365052 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 715 1678 155 38 0 chr15 17131375 17131665 -86363309 + Lx2 LINE L1 6695 6995 -2 1 715 340 356 67 20 chr15 17132761 17133016 -86361958 + L1MCa LINE L1 76 342 -6166 1 715 973 83 0 34 chr15 17133628 17133777 -86361197 - B1_Mus1 SINE Alu -4 144 1 1 715 275 362 85 25 chr15 17133891 17134050 -86360924 - L1M1 LINE L1 -551 5746 5566 1 715 267 31 0 0 chr15 17134050 17134082 -86360892 + (TTTTG)n Simple_repeat Simple_repeat 5 36 0 1 715 314 330 15 26 chr15 17134082 17134239 -86360735 - L1M1 LINE L1 -732 5565 5411 1 715 424 257 28 7 chr15 17135140 17135281 -86359693 + Lx9 LINE L1 7495 7638 -6 1 715 975 232 72 50 chr15 17135285 17135644 -86359330 + Lx9 LINE L1 7251 7617 -27 1 715 34 55 0 0 chr15 17135865 17135920 -86359054 + AT_rich Low_complexity Low_complexity 1 55 0 1 715 1628 227 66 193 chr15 17135943 17136643 -86358331 - RMER19C LTR ERVK 0 611 1 1 715 327 389 30 25 chr15 17136783 17137018 -86357956 - B4A SINE B4 -55 237 2 1 715 2200 206 154 34 chr15 17137896 17138188 -86356786 - RMER6D LTR ERVK 0 720 374 1 715 353 58 19 0 chr15 17138188 17138240 -86356734 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 715 2200 206 154 34 chr15 17138240 17138253 -86356721 - RMER6D LTR ERVK -347 373 364 1 715 231 36 0 0 chr15 17138253 17138281 -86356693 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 715 2200 206 154 34 chr15 17138281 17138617 -86356357 - RMER6D LTR ERVK -357 363 1 1 715 266 278 139 29 chr15 17138837 17138974 -86356000 + MIR SINE MIR 97 248 -14 1 715 5133 78 29 8 chr15 17139151 17139877 -86355097 + L1Md_F2 LINE L1 5842 6582 0 1 715 317 24 24 0 chr15 17140757 17140799 -86354175 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 715 366 23 0 0 chr15 17140808 17140851 -86354123 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 715 311 309 21 0 chr15 17140895 17140992 -86353982 - B4A SINE B4 -8 284 186 1 715 346 298 29 9 chr15 17141032 17141137 -86353837 - B4A SINE B4 -184 108 2 1 715 248 375 0 0 chr15 17141697 17141785 -86353189 - Lx8 LINE L1 -356 7117 7030 1 715 1958 291 53 16 chr15 17141822 17142401 -86352573 + Lx5 LINE L1 6446 7046 -4 1 715 374 81 32 0 chr15 17142628 17142690 -86352284 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 1 715 207 0 0 0 chr15 17143288 17143311 -86351663 + (A)n Simple_repeat Simple_repeat 1 23 0 1 715 364 338 9 13 chr15 17143421 17143632 -86351342 + Lx7 LINE L1 5589 5796 -84 1 715 296 346 52 44 chr15 17144163 17144299 -86350675 - MTE-int LTR MaLR -11 1569 1433 1 715 3391 106 28 0 chr15 17144310 17144803 -86350171 + Lx3_Mus LINE L1 6459 6965 -44 1 715 366 23 0 0 chr15 17144806 17144849 -86350125 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 715 228 67 0 0 chr15 17144849 17144878 -86350096 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 715 854 340 63 34 chr15 17144967 17145286 -86349688 - MTE-int LTR MaLR -235 1345 1018 1 715 7276 35 0 1 chr15 17145286 17146161 -86348813 + L1Md_F3 LINE L1 5711 6584 0 1 715 854 356 60 40 chr15 17146161 17146253 -86348721 - MTE-int LTR MaLR -563 1017 954 1 715 198 0 0 0 chr15 17146496 17146518 -86348456 + (CAAA)n Simple_repeat Simple_repeat 1 22 0 2 715 332 326 103 14 chr15 17146638 17146784 -86348190 - MTE-int LTR MaLR -1236 344 186 1 715 4807 137 33 5 chr15 17146793 17147578 -86347396 - Lx LINE L1 0 6654 5848 2 715 776 303 19 5 chr15 17147741 17147950 -86347024 + B3 SINE B2 2 213 -3 2 715 21 0 0 0 chr15 17148249 17148270 -86346704 + AT_rich Low_complexity Low_complexity 1 21 0 2 715 22 35 0 0 chr15 17148501 17148530 -86346444 + AT_rich Low_complexity Low_complexity 1 29 0 2 715 22 0 0 0 chr15 17150965 17150987 -86343987 + AT_rich Low_complexity Low_complexity 1 22 0 2 715 519 17 0 0 chr15 17153900 17153960 -86341014 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 715 448 347 42 70 chr15 17154624 17154688 -86340286 - B3 SINE B2 -8 208 151 2 715 1523 37 27 0 chr15 17154688 17154876 -86340098 - B2_Mm1a SINE B2 0 193 1 2 715 448 347 42 70 chr15 17154876 17155025 -86339949 - B3 SINE B2 -66 150 1 2 715 980 92 7 7 chr15 17155244 17155387 -86339587 + B1_Mus1 SINE Alu 5 147 -1 2 715 315 0 0 0 chr15 17155406 17155441 -86339533 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2 715 311 230 50 44 chr15 17155474 17155633 -86339341 + RMER17A LTR ERVK 296 455 -296 2 715 2174 112 34 6 chr15 17155784 17156142 -86338832 + RLTR9A LTR ERVK 1 368 0 2 715 2392 123 44 5 chr15 17157149 17157556 -86337418 - Lx LINE L1 -15 6639 6217 2 715 522 281 81 102 chr15 17157655 17157691 -86337283 - MTC LTR MaLR -14 365 325 2 715 216 0 0 0 chr15 17157691 17157715 -86337259 + (TC)n Simple_repeat Simple_repeat 1 24 0 2 715 1450 199 79 27 chr15 17157715 17158023 -86336951 - MTC LTR MaLR -59 362 40 2 715 1237 217 145 33 chr15 17158021 17158555 -86336419 - RMER6C LTR ERVK -51 639 3 2 715 28 29 0 0 chr15 17158666 17158701 -86336273 + AT_rich Low_complexity Low_complexity 1 35 0 2 715 32 26 0 0 chr15 17159094 17159133 -86335841 + AT_rich Low_complexity Low_complexity 1 39 0 2 715 23 33 0 0 chr15 17160625 17160655 -86334319 + AT_rich Low_complexity Low_complexity 1 30 0 2 715 422 123 0 47 chr15 17160727 17160812 -86334162 - Lx LINE L1 -6 6648 6568 2 715 23 0 0 0 chr15 17161062 17161085 -86333889 + AT_rich Low_complexity Low_complexity 1 23 0 2 715 270 0 0 0 chr15 17161221 17161251 -86333723 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 715 647 314 71 20 chr15 17161253 17161704 -86333270 - L1M2 LINE L1 -918 5225 4752 2 715 450 339 95 19 chr15 17161707 17162077 -86332897 + L1_Rod LINE L1 5439 5836 -11 2 715 424 274 114 7 chr15 17162130 17162266 -86332708 - B3 SINE B2 -5 193 38 2 715 783 32 0 0 chr15 17162285 17162379 -86332595 + (TTC)n Simple_repeat Simple_repeat 3 96 0 2 715 2399 104 55 0 chr15 17162379 17162745 -86332229 - L1_Mus4 LINE L1 -338 6298 5913 2 715 369 0 0 0 chr15 17163493 17163534 -86331440 + (TTA)n Simple_repeat Simple_repeat 1 41 0 2 715 2041 236 60 16 chr15 17164102 17164605 -86330369 + RMER5 LTR ERV1 1 525 -9 2 715 532 253 36 10 chr15 17165512 17165704 -86329270 + Lx9 LINE L1 7384 7580 -64 2 715 214 105 79 0 chr15 17165772 17165810 -86329164 + T-rich Low_complexity Low_complexity 5 45 0 2 715 221 336 33 16 chr15 17166001 17166122 -86328852 - ID_B1 SINE B4 -8 216 94 2 715 23 54 0 0 chr15 17166704 17166741 -86328233 + AT_rich Low_complexity Low_complexity 1 37 0 2 715 277 188 109 0 chr15 17166933 17166997 -86327977 + BC1_Mm scRNA scRNA 3 73 -79 2 715 219 45 0 62 chr15 17167006 17167054 -86327920 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 2 715 29 28 0 0 chr15 17168105 17168141 -86326833 + AT_rich Low_complexity Low_complexity 1 36 0 2 715 7006 121 12 6 chr15 17168148 17169595 -86325379 + L1_Mus4 LINE L1 5145 6608 -28 2 715 734 58 0 19 chr15 17169595 17169700 -86325274 + (GAAAA)n Simple_repeat Simple_repeat 3 105 0 2 715 256 271 14 0 chr15 17169746 17169816 -86325158 + Lx8 LINE L1 6722 6792 -681 2 715 497 259 63 99 chr15 17169853 17170076 -86324898 - Lx2B LINE L1 -18 6982 6768 2 89 999 80 0 0 chr15 17170323 17170461 -86324513 - B1_Mus2 SINE Alu 0 147 10 2 716 873 335 111 23 chr15 17170495 17170960 -86324014 + Lx5 LINE L1 6509 7390 -70 2 716 376 255 26 94 chr15 17171125 17171242 -86323732 + ORR1D2 LTR MaLR 3 111 -259 2 716 304 148 0 18 chr15 17171253 17171308 -86323666 + RLTR12A LTR ERVK 12 65 -503 2 716 2138 215 37 7 chr15 17171407 17171861 -86323113 + Lx2B LINE L1 6322 6789 -211 2 716 37 39 0 0 chr15 17172149 17172200 -86322774 + AT_rich Low_complexity Low_complexity 1 51 0 2 716 25 51 0 0 chr15 17172887 17172926 -86322048 + AT_rich Low_complexity Low_complexity 1 39 0 2 716 1820 59 14 69 chr15 17173378 17173668 -86321306 + L1Md_F3 LINE L1 6296 6569 -15 2 716 232 380 26 53 chr15 17175141 17175255 -86319719 + MIR SINE MIR 17 127 -81 2 716 778 276 72 83 chr15 17176164 17176562 -86318412 - ORR1D2 LTR MaLR 0 374 3 2 716 210 231 0 0 chr15 17176788 17176853 -86318121 + (CATATA)n Simple_repeat Simple_repeat 6 70 0 2 716 23 0 0 0 chr15 17177156 17177179 -86317795 + AT_rich Low_complexity Low_complexity 1 23 0 2 716 277 315 32 11 chr15 17177554 17177647 -86317327 + LFSINE_Vert SINE SINE 113 207 -252 2 716 21 0 0 0 chr15 17177854 17177875 -86317099 + AT_rich Low_complexity Low_complexity 1 21 0 2 716 299 341 7 58 chr15 17177877 17178014 -86316960 - B1_Mus1 SINE Alu 0 148 19 2 716 8095 38 1 1 chr15 17178284 17179846 -86315128 - L1Md_F2 LINE L1 -1 6581 5020 2 716 16673 75 0 34 chr15 17179843 17182044 -86312930 + L1_Mm LINE L1 3106 5287 -596 2 716 3943 30 0 0 chr15 17182044 17182505 -86312469 + L1Md_T LINE L1 6122 6582 0 2 716 1150 150 17 64 chr15 17182512 17182747 -86312227 + URR1B DNA MER1_type 2 225 0 2 716 16673 75 0 34 chr15 17182747 17182913 -86312061 + L1_Mm LINE L1 5288 5400 -483 2 716 24 32 0 0 chr15 17183020 17183051 -86311923 + AT_rich Low_complexity Low_complexity 1 31 0 2 716 21 71 0 0 chr15 17183261 17183303 -86311671 + AT_rich Low_complexity Low_complexity 1 42 0 2 716 23 0 0 0 chr15 17183323 17183346 -86311628 + AT_rich Low_complexity Low_complexity 1 23 0 2 716 369 0 0 0 chr15 17183761 17183802 -86311172 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2 716 3814 112 7 5 chr15 17183802 17184376 -86310598 - Lx3A LINE L1 -15 6966 6392 2 716 918 193 0 0 chr15 17184476 17184705 -86310269 + CT-rich Low_complexity Low_complexity 1 229 0 2 716 570 241 21 0 chr15 17184708 17184853 -86310121 - B1_Mus1 SINE Alu 0 148 1 2 716 2133 198 45 2 chr15 17185168 17185589 -86309385 - Lx4A LINE L1 0 7058 6620 2 716 312 130 111 0 chr15 17185589 17185643 -86309331 - Lx4A LINE L1 -527 6531 6472 2 716 2583 101 46 18 chr15 17185650 17186042 -86308932 - Lx3_Mus LINE L1 -56 6953 6551 2 716 5135 136 42 16 chr15 17186045 17186897 -86308077 + Lx3B LINE L1 5653 6526 -447 2 716 22 0 0 0 chr15 17187690 17187712 -86307262 + AT_rich Low_complexity Low_complexity 1 22 0 2 716 207 139 0 0 chr15 17187746 17187782 -86307192 + (TA)n Simple_repeat Simple_repeat 1 36 0 2 716 183 80 0 0 chr15 17187912 17187937 -86307037 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2 716 283 264 60 0 chr15 17188247 17188376 -86306598 - Lx7 LINE L1 -63 7633 7569 2 716 1016 81 15 0 chr15 17188383 17188519 -86306455 + B1_Mus2 SINE Alu 2 139 -8 2 716 770 143 7 0 chr15 17188520 17188667 -86306307 + (GAAA)n Simple_repeat Simple_repeat 4 151 0 2 716 22 35 0 0 chr15 17189429 17189458 -86305516 + AT_rich Low_complexity Low_complexity 1 29 0 2 716 315 146 0 0 chr15 17189605 17189660 -86305314 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 716 3448 76 47 0 chr15 17189677 17190150 -86304824 - L1_Mus1 LINE L1 0 6567 6073 2 716 21 95 0 0 chr15 17191908 17191971 -86303003 + AT_rich Low_complexity Low_complexity 1 63 0 2 716 571 329 109 48 chr15 17192784 17193180 -86301794 - MER21B LTR ERV1 -54 809 390 2 716 375 343 65 24 chr15 17193200 17193370 -86301604 - MER21B LTR ERV1 -524 339 163 2 716 400 288 57 7 chr15 17193822 17193962 -86301012 - RMER5 LTR ERV1 -13 521 375 2 716 486 318 115 23 chr15 17195181 17195442 -86299532 - MTE2a LTR MaLR -18 361 77 2 716 486 49 0 0 chr15 17195677 17195738 -86299236 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 716 927 280 77 4 chr15 17195746 17196018 -86298956 - Lx9 LINE L1 -731 6913 6622 2 716 599 260 27 0 chr15 17196008 17196154 -86298820 + Lx9 LINE L1 7115 7264 -380 2 716 35356 35 1 0 chr15 17196164 17202417 -86292557 + L1Md_T LINE L1 1 5589 -297 2 716 8942 5 0 4 chr15 17202417 17203417 -86291557 + L1Md_T LINE L1 5590 6585 0 2 716 836 218 120 54 chr15 17203431 17203765 -86291209 + Lx9 LINE L1 7274 7629 -15 2 716 25 51 0 0 chr15 17204086 17204125 -86290849 + AT_rich Low_complexity Low_complexity 1 39 0 2 716 37 62 0 0 chr15 17204434 17204499 -86290475 + AT_rich Low_complexity Low_complexity 1 65 0 2 716 185 234 16 0 chr15 17204886 17204950 -86290024 + C-rich Low_complexity Low_complexity 27 91 0 2 716 24 32 0 0 chr15 17205224 17205255 -86289719 + AT_rich Low_complexity Low_complexity 1 31 0 2 716 21 89 0 0 chr15 17206002 17206058 -86288916 + AT_rich Low_complexity Low_complexity 1 56 0 2 716 383 307 59 64 chr15 17206058 17206448 -86288526 - Lx9 LINE L1 -4 7640 7253 2 716 1855 144 50 21 chr15 17207899 17208239 -86286735 + Lx2 LINE L1 6646 6995 -2 2 716 946 250 128 20 chr15 17208592 17208984 -86285990 - Lx9 LINE L1 0 7644 7211 2 716 958 80 72 0 chr15 17209322 17209460 -86285514 - B1_Mus1 SINE Alu 0 148 1 2 716 356 263 80 86 chr15 17209661 17209848 -86285126 + B2_Mm2 SINE B2 1 186 -9 2 716 1467 265 66 78 chr15 17209973 17210742 -86284232 + RLTR40 LTR ERVK 1 760 -57 2 716 4482 104 20 2 chr15 17211355 17212000 -86282974 - Lx3_Mus LINE L1 -8 7001 6345 2 716 1011 67 0 0 chr15 17212880 17213015 -86281959 + B1_Mus1 SINE Alu 12 146 -2 2 716 334 200 52 46 chr15 17213098 17213342 -86281632 + (TTATA)n Simple_repeat Simple_repeat 1 245 0 3 716 285 223 28 35 chr15 17213252 17213396 -86281578 + (TATAA)n Simple_repeat Simple_repeat 5 147 0 3 716 360 218 42 12 chr15 17213380 17213547 -86281427 + (TA)n Simple_repeat Simple_repeat 2 173 0 3 716 246 115 32 16 chr15 17213567 17213629 -86281345 + (TA)n Simple_repeat Simple_repeat 1 63 0 3 716 620 36 12 0 chr15 17214257 17214340 -86280634 + (TG)n Simple_repeat Simple_repeat 2 85 0 3 716 269 124 107 74 chr15 17215283 17215405 -86279569 - Lx9 LINE L1 -7 7637 7512 3 716 411 225 45 0 chr15 17215408 17215519 -86279455 + Lx9 LINE L1 7351 7466 -178 3 716 936 250 20 20 chr15 17216048 17216301 -86278673 - Lx4B LINE L1 -649 6409 6157 3 716 625 245 104 16 chr15 17216299 17216570 -86278404 + Lx4B LINE L1 6668 7050 -8 3 716 23 33 0 0 chr15 17216571 17216601 -86278373 + AT_rich Low_complexity Low_complexity 1 30 0 3 716 620 226 81 31 chr15 17216601 17216761 -86278213 + B2_Mm2 SINE B2 2 169 -26 3 716 3907 155 60 4 chr15 17216884 17217579 -86277395 + Lx2A1 LINE L1 6275 7008 0 3 716 585 282 60 26 chr15 17217884 17218122 -86276852 - MTE-int LTR MaLR -69 1511 1288 3 716 300 188 0 0 chr15 17218132 17218196 -86276778 + (CAT)n Simple_repeat Simple_repeat 2 65 0 3 716 333 330 0 68 chr15 17218312 17218429 -86276545 - MTE-int LTR MaLR -446 1134 1026 3 716 940 370 66 37 chr15 17218967 17219531 -86275443 - MTE-int LTR MaLR -586 994 415 3 716 248 241 53 75 chr15 17219549 17219643 -86275331 - MTE-int LTR MaLR -1444 136 45 3 716 392 119 0 0 chr15 17219822 17219889 -86275085 + Lx LINE L1 6583 6649 -5 3 716 460 263 0 0 chr15 17220053 17220186 -86274788 - Lx6 LINE L1 -4 7456 7324 3 716 22 0 0 0 chr15 17220465 17220487 -86274487 + AT_rich Low_complexity Low_complexity 1 22 0 3 716 1104 239 60 74 chr15 17221132 17221512 -86273462 + ORR1C1 LTR MaLR 4 378 0 3 716 236 288 75 15 chr15 17221801 17221868 -86273106 - B1F2 SINE Alu -63 86 16 3 716 24 67 0 0 chr15 17222693 17222738 -86272236 + AT_rich Low_complexity Low_complexity 1 45 0 3 716 447 304 44 6 chr15 17224544 17224703 -86270271 + B3A SINE B2 9 173 -25 3 716 546 16 0 0 chr15 17224709 17224772 -86270202 + (TC)n Simple_repeat Simple_repeat 1 63 0 3 716 560 329 5 36 chr15 17224805 17225026 -86269948 - Lx7 LINE L1 -589 7107 6894 3 716 389 319 42 37 chr15 17225381 17225570 -86269404 - B3A SINE B2 -8 190 1 3 716 34 42 0 0 chr15 17226086 17226134 -86268840 + AT_rich Low_complexity Low_complexity 1 48 0 3 716 210 321 0 0 chr15 17227291 17227372 -86267602 + GA-rich Low_complexity Low_complexity 2 82 0 3 716 429 358 42 16 chr15 17227426 17227619 -86267355 + B3A SINE B2 1 198 0 3 716 216 0 0 0 chr15 17227878 17227902 -86267072 + (T)n Simple_repeat Simple_repeat 1 24 0 3 716 189 107 0 0 chr15 17228953 17228981 -86265993 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 716 4828 140 38 9 chr15 17228981 17229795 -86265179 - Lx3A LINE L1 -25 6956 6119 3 716 1312 97 0 5 chr15 17229793 17229989 -86264985 - L1_Mur1 LINE L1 -935 4951 4757 3 716 255 259 45 45 chr15 17230059 17230148 -86264826 - MLT-int LTR MaLR -970 765 677 3 716 234 358 51 51 chr15 17230380 17230633 -86264341 - MLT-int LTR MaLR -1114 621 369 3 716 280 359 0 0 chr15 17230774 17230866 -86264108 - MLT1-int LTR MaLR -1275 96 5 3 716 405 0 0 0 chr15 17231152 17231197 -86263777 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 3 716 24 91 0 0 chr15 17232532 17232598 -86262376 + AT_rich Low_complexity Low_complexity 1 66 0 3 716 275 333 66 82 chr15 17232985 17233181 -86261793 - ORR1E LTR MaLR -164 195 3 3 716 47 33 0 0 chr15 17234396 17234457 -86260517 + AT_rich Low_complexity Low_complexity 1 61 0 3 716 225 323 0 0 chr15 17234780 17234842 -86260132 + (CATA)n Simple_repeat Simple_repeat 2 63 0 3 716 1972 292 60 35 chr15 17234845 17235317 -86259657 - Lx9 LINE L1 -139 7505 7036 3 716 405 0 0 0 chr15 17235317 17235362 -86259612 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 716 1972 292 60 35 chr15 17235362 17235700 -86259274 - Lx9 LINE L1 -609 7035 6675 3 716 300 289 0 26 chr15 17235702 17235780 -86259194 + B4 SINE B4 6 81 -211 3 716 401 0 20 0 chr15 17235837 17235886 -86259088 + (TAAAA)n Simple_repeat Simple_repeat 2 51 0 3 716 369 0 0 0 chr15 17236013 17236054 -86258920 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 716 1125 196 9 0 chr15 17236102 17236321 -86258653 - RMER6C LTR ERVK -8 682 462 3 716 813 21 0 0 chr15 17236322 17236417 -86258557 + (TTC)n Simple_repeat Simple_repeat 2 96 0 3 716 654 101 0 0 chr15 17236470 17236579 -86258395 + (GA)n Simple_repeat Simple_repeat 2 110 0 3 716 222 250 24 24 chr15 17236615 17236697 -86258277 + GA-rich Low_complexity Low_complexity 2 83 0 3 716 419 100 21 53 chr15 17236697 17236792 -86258182 - Lx LINE L1 -14 6640 6549 3 716 965 221 13 59 chr15 17236905 17237141 -86257833 - RMER6C LTR ERVK -331 359 135 3 716 814 222 68 6 chr15 17237278 17237540 -86257434 + Lx4B LINE L1 986 1344 -5640 3 716 398 155 0 40 chr15 17237551 17237625 -86257349 + ORR1A2 LTR MaLR 93 163 -164 3 716 3041 195 39 21 chr15 17237598 17238315 -86256659 + ORR1A2-int LTR MaLR 353 1082 -710 3 716 10805 196 48 24 chr15 17238316 17239694 -86255280 + Lx4B LINE L1 3136 4600 -1277 3 716 3395 192 20 2 chr15 17239694 17240339 -86254635 + Lx4A LINE L1 6390 7046 -12 3 716 10805 196 48 24 chr15 17240339 17240972 -86254002 + Lx4B LINE L1 4601 5226 -651 3 716 576 0 0 0 chr15 17240972 17241036 -86253938 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 716 10805 196 48 24 chr15 17241036 17241188 -86253786 + Lx4B LINE L1 5227 5373 -504 3 716 5475 61 0 26 chr15 17241188 17241924 -86253050 + L1Md_F2 LINE L1 5863 6579 -3 3 716 10805 196 48 24 chr15 17241924 17242303 -86252671 + Lx4B LINE L1 5374 5741 -136 3 716 553 326 0 45 chr15 17242656 17242858 -86252116 - RMER13A LTR ERVK -573 287 95 3 716 201 94 0 0 chr15 17242977 17243009 -86251965 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 3 716 1023 204 5 18 chr15 17243009 17243350 -86251624 + MERVK26-int LTR ERVK 3196 3566 -3353 3 716 1303 197 23 26 chr15 17243354 17243684 -86251290 + Lx4B LINE L1 5742 6024 -1034 3 716 6076 36 9 5 chr15 17243684 17244427 -86250547 + L1Md_F2 LINE L1 5835 6580 -2 3 716 1178 262 14 125 chr15 17244427 17244681 -86250293 + Lx4B LINE L1 6017 6261 -739 3 716 321 230 29 20 chr15 17244676 17244778 -86250196 - Lx4B LINE L1 -719 6339 6237 3 716 418 364 58 11 chr15 17245303 17245492 -86249482 + LTR80A LTR ERVL 373 570 -13 3 716 263 320 30 10 chr15 17246090 17246191 -86248783 + PB1D9 SINE Alu 2 104 -16 3 716 24 53 0 0 chr15 17246236 17246274 -86248700 + AT_rich Low_complexity Low_complexity 1 38 0 3 716 429 20 0 0 chr15 17246363 17246413 -86248561 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 716 1165 350 101 30 chr15 17246696 17247391 -86247583 - Lx8 LINE L1 -509 6964 6221 3 716 5316 111 90 36 chr15 17247612 17248563 -86246411 + Lx3A LINE L1 5970 6972 -9 3 716 31 44 0 0 chr15 17248565 17248610 -86246364 + AT_rich Low_complexity Low_complexity 1 45 0 3 716 333 68 0 0 chr15 17248674 17248718 -86246256 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 716 360 304 72 46 chr15 17248721 17248983 -86245991 - Lx7 LINE L1 -1794 5902 5634 3 716 1116 82 0 0 chr15 17249470 17249617 -86245357 + B1_Mus1 SINE Alu 2 148 0 3 716 424 336 0 0 chr15 17249701 17249817 -86245157 + MLT1A0 LTR MaLR 246 361 -4 3 716 386 213 78 8 chr15 17250793 17250921 -86244053 - Lx2B LINE L1 -824 6176 6040 3 716 2753 262 106 36 chr15 17250978 17252038 -86242936 - Lx7 LINE L1 -518 7178 6045 3 716 2658 104 8 12 chr15 17252169 17252569 -86242405 - MTB LTR MaLR -2 398 1 3 716 204 219 0 0 chr15 17253242 17253283 -86241691 + (CATA)n Simple_repeat Simple_repeat 1 41 0 3 716 612 316 28 14 chr15 17254596 17254808 -86240166 - B3 SINE B2 -1 215 1 3 716 21 0 0 0 chr15 17254842 17254863 -86240111 + AT_rich Low_complexity Low_complexity 1 21 0 3 716 472 303 71 95 chr15 17255027 17255424 -86239550 - L1MA4 LINE L1 -383 5917 5533 3 716 714 44 0 0 chr15 17255424 17255514 -86239460 + (TA)n Simple_repeat Simple_repeat 1 90 0 3 716 472 303 71 95 chr15 17255514 17255536 -86239438 - L1MA4 LINE L1 -768 5532 5509 3 716 21 0 0 0 chr15 17255915 17255936 -86239038 + AT_rich Low_complexity Low_complexity 1 21 0 3 716 415 349 0 0 chr15 17255985 17256091 -86238883 - PB1D10 SINE Alu -9 108 3 3 716 1491 311 41 18 chr15 17256389 17256903 -86238071 + Lx6 LINE L1 6932 7457 -3 3 716 284 64 21 0 chr15 17257257 17257304 -86237670 + (TC)n Simple_repeat Simple_repeat 1 48 0 3 716 1039 66 0 0 chr15 17257364 17257500 -86237474 - B1_Mus2 SINE Alu 0 147 12 3 716 21 0 0 0 chr15 17257832 17257853 -86237121 + AT_rich Low_complexity Low_complexity 1 21 0 3 716 449 277 189 65 chr15 17258806 17259191 -86235783 + RLTR12B LTR ERVK 76 508 -20 3 716 22 0 0 0 chr15 17260362 17260384 -86234590 + AT_rich Low_complexity Low_complexity 1 22 0 3 716 2141 289 91 4 chr15 17261869 17262551 -86232423 + Lx7 LINE L1 6251 6991 -705 3 716 1234 137 5 5 chr15 17262567 17262787 -86232187 - Lx LINE L1 -12 6642 6423 3 716 293 314 0 35 chr15 17263349 17263453 -86231521 - B1F2 SINE Alu -53 96 1 3 716 264 281 24 16 chr15 17263652 17263775 -86231199 + L1_Rod LINE L1 5261 5384 -463 3 716 720 271 95 30 chr15 17263819 17264082 -86230892 + Lx9 LINE L1 7158 7437 -207 3 716 22 70 0 0 chr15 17264246 17264289 -86230685 + AT_rich Low_complexity Low_complexity 1 43 0 3 716 37 23 0 0 chr15 17264362 17264406 -86230568 + AT_rich Low_complexity Low_complexity 1 44 0 3 716 713 298 24 28 chr15 17264406 17264617 -86230357 + B3 SINE B2 6 215 -1 3 716 6327 75 20 2 chr15 17264937 17265793 -86229181 + L1Md_F2 LINE L1 5693 6563 -19 3 716 21 36 0 0 chr15 17266185 17266213 -86228761 + AT_rich Low_complexity Low_complexity 1 28 0 3 716 26 64 0 0 chr15 17266396 17266443 -86228531 + AT_rich Low_complexity Low_complexity 1 47 0 3 716 481 211 11 0 chr15 17266765 17266860 -86228114 - ORR1B1 LTR MaLR -51 343 248 3 716 306 0 0 0 chr15 17267013 17267047 -86227927 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 716 1015 179 16 0 chr15 17267522 17267706 -86227268 + B2_Mm2 SINE B2 1 187 -8 3 716 252 205 33 7 chr15 17268335 17268487 -86226487 + (TA)n Simple_repeat Simple_repeat 2 157 0 3 716 8028 41 3 4 chr15 17268888 17270640 -86224334 - L1Md_F2 LINE L1 0 6582 4991 3 716 726 125 36 0 chr15 17270757 17270869 -86224105 + L1_Mus2 LINE L1 5629 5744 -822 4 716 476 284 70 53 chr15 17270869 17271040 -86223934 - B3A SINE B2 -18 180 7 4 716 441 0 0 0 chr15 17271068 17271117 -86223857 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 716 576 0 0 0 chr15 17271117 17271180 -86223794 + (GA)n Simple_repeat Simple_repeat 1 64 0 4 716 469 365 65 9 chr15 17271180 17271412 -86223562 - B4A SINE B4 -39 253 9 4 716 22 35 0 0 chr15 17272018 17272047 -86222927 + AT_rich Low_complexity Low_complexity 1 29 0 4 716 573 73 31 0 chr15 17272193 17272289 -86222685 + (TA)n Simple_repeat Simple_repeat 2 100 0 4 716 22 0 0 0 chr15 17272316 17272338 -86222636 + AT_rich Low_complexity Low_complexity 1 22 0 4 716 3792 18 0 0 chr15 17272872 17273309 -86221665 + L1Md_A LINE L1 6146 6582 0 4 716 1022 215 12 16 chr15 17273747 17273998 -86220976 + Lx2 LINE L1 6707 6956 -41 4 716 7033 114 68 3 chr15 17273988 17274459 -86220515 + Lx3A LINE L1 4681 5161 -725 4 716 465 19 0 0 chr15 17274459 17274513 -86220461 + (GAAA)n Simple_repeat Simple_repeat 3 56 0 4 716 7549 113 55 13 chr15 17274513 17276100 -86218874 + Lx3A LINE L1 5162 6847 -134 4 716 707 42 11 0 chr15 17276225 17276320 -86218654 + (TG)n Simple_repeat Simple_repeat 1 96 0 4 716 258 395 0 50 chr15 17276334 17276454 -86218520 - MTEa LTR MaLR -172 207 94 4 716 772 309 16 53 chr15 17277366 17277820 -86217154 + ERVL-B4-int LTR ERVL 2086 2631 -3126 4 716 368 40 0 20 chr15 17278239 17278290 -86216684 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 716 217 135 0 26 chr15 17278313 17278351 -86216623 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 716 639 292 10 52 chr15 17278606 17278796 -86216178 - L1_Mur3 LINE L1 -2002 3878 3695 4 716 1276 76 0 0 chr15 17278796 17278968 -86216006 - L1_Mus1 LINE L1 0 6567 6396 4 716 639 292 10 52 chr15 17278968 17279163 -86215811 - L1_Mur3 LINE L1 -2186 3694 3509 4 716 545 303 0 10 chr15 17279203 17279400 -86215574 + L1_Mur2 LINE L1 4823 5017 -860 4 716 527 378 75 24 chr15 17279446 17280150 -86214824 + Lx8 LINE L1 6281 7020 -453 4 716 396 0 0 0 chr15 17280430 17280474 -86214500 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 716 311 61 41 0 chr15 17280498 17280547 -86214427 + (CAGAGA)n Simple_repeat Simple_repeat 2 52 0 4 716 1746 197 284 42 chr15 17280617 17281153 -86213821 - RMER6A LTR ERVK -80 676 10 4 716 387 0 0 0 chr15 17281153 17281196 -86213778 + (TC)n Simple_repeat Simple_repeat 2 44 0 4 716 444 126 0 0 chr15 17281196 17281282 -86213692 + (TA)n Simple_repeat Simple_repeat 2 88 0 4 716 3198 169 44 16 chr15 17281286 17281899 -86213075 + Lx3B LINE L1 6339 6968 -5 4 716 316 163 11 11 chr15 17281912 17281999 -86212975 + (TA)n Simple_repeat Simple_repeat 2 88 0 4 716 180 0 0 0 chr15 17281999 17282019 -86212955 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 716 32 0 0 0 chr15 17282982 17283014 -86211960 + AT_rich Low_complexity Low_complexity 1 32 0 4 716 302 398 23 0 chr15 17283210 17283338 -86211636 - RSINE1 SINE B4 -30 135 5 4 716 1252 231 29 9 chr15 17283556 17283906 -86211068 - L1_Mur3 LINE L1 -667 5213 4857 4 716 251 288 24 16 chr15 17283907 17284034 -86210940 - L1_Mur3 LINE L1 -1133 4747 4620 4 716 428 332 10 16 chr15 17284049 17284220 -86210754 - Lx5 LINE L1 -145 6905 6776 4 716 1219 56 0 0 chr15 17284221 17284381 -86210593 + L1_Mus1 LINE L1 6408 6567 0 4 716 235 229 0 0 chr15 17284388 17284449 -86210525 + A-rich Low_complexity Low_complexity 1 61 0 4 716 300 151 157 126 chr15 17284563 17284610 -86210364 - L1_Mur3 LINE L1 -1237 4640 4605 4 716 3787 84 0 2 chr15 17284610 17285108 -86209866 + L1_Mus1 LINE L1 6071 6567 0 4 716 300 151 157 126 chr15 17285108 17285219 -86209755 - L1_Mur3 LINE L1 -1273 4604 4477 4 716 733 226 9 9 chr15 17285229 17285448 -86209526 + L1_Mur2 LINE L1 1205 1423 -4454 4 716 205 100 40 0 chr15 17285451 17285501 -86209473 + (CAAAA)n Simple_repeat Simple_repeat 4 55 0 4 716 1154 82 0 0 chr15 17285578 17285725 -86209249 + B1_Mus1 SINE Alu 2 148 0 4 716 224 30 30 0 chr15 17285730 17285763 -86209211 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 716 23 0 0 0 chr15 17286848 17286871 -86208103 + AT_rich Low_complexity Low_complexity 1 23 0 4 716 412 262 29 47 chr15 17287458 17287689 -86207285 - L1_Mur3 LINE L1 -799 5501 5238 4 716 696 330 29 40 chr15 17287754 17288199 -86206775 + L1_Mur2 LINE L1 3481 3920 -1960 4 716 27246 96 87 11 chr15 17288215 17293362 -86201612 + L1Md_F LINE L1 238 5759 -124 4 716 951 98 24 30 chr15 17293362 17293530 -86201444 + L1Md_F2 LINE L1 6404 6570 -12 4 716 1014 109 0 0 chr15 17293927 17294074 -86200900 + B1_Mus1 SINE Alu 2 148 0 4 716 27 92 0 0 chr15 17294439 17294515 -86200459 + AT_rich Low_complexity Low_complexity 1 76 0 4 716 265 186 17 0 chr15 17294532 17294591 -86200383 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 716 198 0 0 0 chr15 17294635 17294657 -86200317 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 716 1318 174 89 144 chr15 17294676 17295093 -86199881 - ORR1B1 LTR MaLR 0 394 1 4 716 213 39 0 0 chr15 17295245 17295271 -86199703 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 716 21 0 0 0 chr15 17295490 17295511 -86199463 + AT_rich Low_complexity Low_complexity 1 21 0 4 716 1080 200 84 48 chr15 17295790 17296184 -86198790 - L1_Mur3 LINE L1 -4085 1795 1388 4 716 1766 199 106 3 chr15 17296203 17296560 -86198414 - Lx5 LINE L1 0 7050 6657 4 716 4848 189 30 19 chr15 17296660 17297757 -86197217 + Lx5 LINE L1 5503 6609 -441 4 716 1262 185 14 0 chr15 17297934 17298156 -86196818 - ORR1B1 LTR MaLR -6 388 164 4 716 2629 221 22 9 chr15 17298156 17299165 -86195809 - Lx5 LINE L1 -3981 1899 921 4 716 890 337 43 15 chr15 17299294 17299893 -86195081 - Lx5 LINE L1 -7040 688 73 4 716 374 284 43 0 chr15 17299892 17300033 -86194941 - L1M3 LINE L1 -2154 3986 3840 4 716 24 53 0 0 chr15 17300309 17300347 -86194627 + AT_rich Low_complexity Low_complexity 1 38 0 4 716 467 372 69 28 chr15 17301094 17301484 -86193490 - MLT1A1 LTR MaLR 0 408 3 4 717 322 377 81 20 chr15 17302338 17302695 -86192279 + MTE2b LTR MaLR 1 379 0 4 717 21 57 0 0 chr15 17303097 17303132 -86191842 + AT_rich Low_complexity Low_complexity 1 35 0 4 717 243 0 0 0 chr15 17303858 17303885 -86191089 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 4 717 274 256 24 60 chr15 17304444 17304527 -86190447 - PB1D10 SINE Alu 0 117 38 4 717 812 344 9 40 chr15 17305341 17305689 -86189285 + Lx5 LINE L1 6685 7021 -29 4 717 1339 98 5 27 chr15 17305885 17306106 -86188868 - L1Md_F2 LINE L1 -3 6579 6364 4 717 577 84 15 0 chr15 17306106 17306197 -86188777 + L1_Mm LINE L1 5312 5405 -475 4 717 1626 263 64 4 chr15 17307450 17307739 -86187235 - Lx7 LINE L1 -342 7354 7044 4 717 1370 46 10 53 chr15 17307739 17307946 -86187028 + L1Md_F3 LINE L1 6387 6584 0 4 717 1626 263 64 4 chr15 17307946 17308156 -86186818 - Lx7 LINE L1 -653 7043 6827 4 717 346 276 28 59 chr15 17308155 17308409 -86186565 + Lx7 LINE L1 7451 7696 0 4 717 988 299 61 12 chr15 17308785 17309130 -86185844 - ORR1D2 LTR MaLR -8 362 1 4 717 425 211 134 45 chr15 17309134 17309268 -86185706 - Lx6 LINE L1 -4 7456 7311 4 717 1123 258 53 32 chr15 17309523 17309863 -86185111 - Lx6 LINE L1 -474 6986 6640 4 717 2982 44 0 3 chr15 17310674 17311042 -86183932 - L1Md_F2 LINE L1 -13 6569 6203 4 717 788 170 0 13 chr15 17311203 17311358 -86183616 + Lx3C LINE L1 6822 6974 -2 4 717 4966 77 22 4 chr15 17312174 17312852 -86182122 + L1Md_F2 LINE L1 5879 6568 -14 4 717 407 336 54 24 chr15 17312857 17313195 -86181779 + MTEa LTR MaLR 32 376 -3 4 717 238 286 22 67 chr15 17313373 17313508 -86181466 - L1M7 LINE L1 -4708 1510 1382 4 717 335 324 11 11 chr15 17313979 17314157 -86180817 + (TG)n Simple_repeat Simple_repeat 1 178 0 4 717 325 363 0 0 chr15 17315062 17315164 -86179810 - ID_B1 SINE B4 -20 204 103 4 717 557 289 37 75 chr15 17315428 17315723 -86179251 - RMER15 LTR ERVL -270 305 22 4 717 2903 133 5 0 chr15 17315821 17316263 -86178711 + Lx2A LINE L1 5321 5764 -119 4 717 770 90 0 0 chr15 17316251 17316351 -86178623 - L1_Mus2 LINE L1 -157 6409 6310 4 717 1236 98 0 0 chr15 17316360 17316534 -86178440 + L1_Mus2 LINE L1 6392 6565 -1 4 717 827 87 9 0 chr15 17316543 17316658 -86178316 + Lx2A LINE L1 5743 5858 -1139 4 717 594 28 0 0 chr15 17316658 17316730 -86178244 + (CA)n Simple_repeat Simple_repeat 1 72 0 4 717 561 200 43 0 chr15 17316731 17316846 -86178128 + Lx2A LINE L1 6142 6261 -736 4 717 22 94 0 0 chr15 17317154 17317218 -86177756 + AT_rich Low_complexity Low_complexity 1 64 0 4 717 305 238 0 0 chr15 17317255 17317318 -86177656 - ID2 SINE ID -11 72 10 4 717 23 68 0 0 chr15 17317773 17317817 -86177157 + AT_rich Low_complexity Low_complexity 1 44 0 4 717 351 0 0 0 chr15 17318399 17318438 -86176536 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 717 645 79 0 0 chr15 17318438 17318538 -86176436 + (GA)n Simple_repeat Simple_repeat 2 102 0 4 717 2733 164 43 21 chr15 17318815 17319344 -86175630 + Lx2A LINE L1 6427 6967 -41 4 717 5667 249 42 18 chr15 17319721 17321657 -86173317 - Lx6 LINE L1 -117 7343 5342 4 717 1631 180 5 121 chr15 17321976 17322348 -86172626 - ORR1A4 LTR MaLR 0 329 1 4 717 1291 128 13 26 chr15 17323272 17323504 -86171470 - L1_Mus3 LINE L1 0 6638 6410 4 717 554 96 0 12 chr15 17323524 17323608 -86171366 - L1_Mus3 LINE L1 -451 6187 6105 4 717 3403 83 55 12 chr15 17323648 17324135 -86170839 + L1Md_F2 LINE L1 6074 6581 -1 4 717 518 242 0 0 chr15 17324231 17324330 -86170644 + Lx4A LINE L1 6741 6839 -219 4 717 690 13 0 0 chr15 17324335 17324414 -86170560 + (CATAG)n Simple_repeat Simple_repeat 4 82 0 4 717 1155 239 131 11 chr15 17324414 17324787 -86170187 + Lx2B LINE L1 6522 6939 -61 4 717 549 0 0 0 chr15 17324821 17324882 -86170092 + (CATA)n Simple_repeat Simple_repeat 2 62 0 4 717 1024 339 72 62 chr15 17324992 17325716 -86169258 + Lx7 LINE L1 6103 6854 -842 4 717 4314 108 25 18 chr15 17325716 17326397 -86168577 + L1_Mus3 LINE L1 5951 6636 -2 4 717 1024 339 72 62 chr15 17326397 17326550 -86168424 + Lx7 LINE L1 6855 6989 -707 4 717 273 343 58 29 chr15 17326623 17326830 -86168144 + Lx7 LINE L1 7144 7356 -340 4 717 280 286 87 11 chr15 17327074 17327166 -86167808 - RMER20B LTR ERVK -208 419 321 4 717 597 64 0 0 chr15 17327188 17327266 -86167708 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 4 717 342 277 10 0 chr15 17327373 17327474 -86167500 + Lx6 LINE L1 7223 7324 -136 4 717 38 0 0 0 chr15 17327483 17327521 -86167453 + AT_rich Low_complexity Low_complexity 1 38 0 4 717 3854 207 59 12 chr15 17327521 17328457 -86166517 - Lx4A LINE L1 -4 7046 6023 4 717 1656 143 16 35 chr15 17328453 17328771 -86166203 - L1_Mur2 LINE L1 -966 4911 4600 4 717 1061 187 23 0 chr15 17328765 17328984 -86165990 - L1_Mur2 LINE L1 -1719 4158 3935 4 717 392 210 46 46 chr15 17329105 17329235 -86165739 + Lx3B LINE L1 6843 6972 -1 5 717 2350 296 12 10 chr15 17330220 17330899 -86164075 + Lx9 LINE L1 6312 6991 -653 5 717 233 119 24 0 chr15 17330904 17330946 -86164028 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 5 717 1580 240 75 45 chr15 17330961 17331603 -86163371 + Lx9 LINE L1 6984 7644 0 5 717 25 0 0 0 chr15 17331919 17331944 -86163030 + AT_rich Low_complexity Low_complexity 1 25 0 5 717 198 72 69 42 chr15 17332234 17332306 -86162668 + (TTATA)n Simple_repeat Simple_repeat 4 77 0 5 717 28 71 0 0 chr15 17332306 17332362 -86162612 + AT_rich Low_complexity Low_complexity 1 56 0 5 717 31 82 0 0 chr15 17332530 17332603 -86162371 + AT_rich Low_complexity Low_complexity 1 73 0 5 717 21 0 0 0 chr15 17333307 17333328 -86161646 + AT_rich Low_complexity Low_complexity 1 21 0 5 717 261 0 0 0 chr15 17333806 17333835 -86161139 + (T)n Simple_repeat Simple_repeat 1 29 0 5 717 5543 41 0 0 chr15 17333851 17334530 -86160444 - L1Md_A LINE L1 0 6582 5904 5 717 24 0 0 0 chr15 17334814 17334838 -86160136 + AT_rich Low_complexity Low_complexity 1 24 0 5 717 24 53 0 0 chr15 17335052 17335090 -86159884 + AT_rich Low_complexity Low_complexity 1 38 0 5 717 31 85 0 25 chr15 17335113 17335233 -86159741 + AT_rich Low_complexity Low_complexity 1 117 0 5 717 201 203 17 17 chr15 17335413 17335473 -86159501 + (CAAA)n Simple_repeat Simple_repeat 3 62 0 5 717 413 234 10 41 chr15 17336762 17336860 -86158114 + ORR1D1 LTR MaLR 1 95 -279 5 717 410 53 18 0 chr15 17336999 17337056 -86157918 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 717 6736 176 41 5 chr15 17337059 17338602 -86156372 - Lx3C LINE L1 -3 6973 5372 5 717 651 26 0 0 chr15 17338602 17338679 -86156295 + (TTTC)n Simple_repeat Simple_repeat 1 77 0 5 717 910 141 0 0 chr15 17338679 17338814 -86156160 - B1_Mus2 SINE Alu -12 135 1 5 717 4607 144 36 11 chr15 17338814 17339104 -86155870 - Lx3C LINE L1 -515 5371 5082 5 717 28 61 0 0 chr15 17339113 17339162 -86155812 + AT_rich Low_complexity Low_complexity 1 49 0 5 717 5933 212 35 9 chr15 17339162 17341280 -86153694 - Lx3C LINE L1 -2 6974 4789 5 717 1010 108 0 12 chr15 17341300 17341468 -86153506 - L1_Mus4 LINE L1 -10 6626 6461 5 717 436 135 14 0 chr15 17341468 17341542 -86153432 - RLTR10 LTR ERVK -310 80 6 5 717 2883 67 5 32 chr15 17341699 17342100 -86152874 + RLTR10 LTR ERVK 1 390 0 5 717 6226 120 13 2 chr15 17342100 17343353 -86151621 - L1_Mus4 LINE L1 -168 6468 5194 5 717 458 103 0 0 chr15 17343354 17343422 -86151552 + L1_Mm LINE L1 4287 4354 -1529 5 717 2059 269 14 20 chr15 17343419 17343727 -86151247 + Lx2B LINE L1 6447 6753 -247 5 717 402 21 0 0 chr15 17343727 17343774 -86151200 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 717 2059 269 14 20 chr15 17343774 17344022 -86150952 + Lx2B LINE L1 6754 7000 0 5 717 219 95 48 0 chr15 17344024 17344066 -86150908 + (CAA)n Simple_repeat Simple_repeat 2 45 0 5 717 432 0 0 0 chr15 17344931 17344979 -86149995 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 717 361 386 37 33 chr15 17345080 17345321 -86149653 + Lx8 LINE L1 6946 7187 -286 5 717 580 93 0 27 chr15 17345440 17345550 -86149424 - RMER17B LTR ERVK -495 463 357 5 717 26 30 0 0 chr15 17346309 17346342 -86148632 + AT_rich Low_complexity Low_complexity 1 33 0 5 717 24 77 0 0 chr15 17346962 17347014 -86147960 + AT_rich Low_complexity Low_complexity 1 52 0 5 717 340 305 98 15 chr15 17347080 17347288 -86147686 - L1MB1 LINE L1 -15 6156 5942 5 717 234 279 51 0 chr15 17347329 17347408 -86147566 - L1MB1 LINE L1 -383 5785 5703 5 717 26 64 0 0 chr15 17347584 17347631 -86147343 + AT_rich Low_complexity Low_complexity 1 47 0 5 717 21 71 0 0 chr15 17347791 17347833 -86147141 + AT_rich Low_complexity Low_complexity 1 42 0 5 717 457 305 124 32 chr15 17348047 17348386 -86146588 - ORR1D2 LTR MaLR 0 370 1 5 717 600 99 0 0 chr15 17348624 17348705 -86146269 + Lx3C LINE L1 6443 6523 -453 5 717 460 121 0 0 chr15 17348706 17348772 -86146202 + Lx3B LINE L1 6488 6553 -420 5 717 297 0 0 0 chr15 17348772 17348805 -86146169 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 717 1900 252 105 13 chr15 17348837 17349154 -86145820 + RMER6D LTR ERVK 3 321 -399 5 717 522 0 0 0 chr15 17349154 17349212 -86145762 + (GA)n Simple_repeat Simple_repeat 1 58 0 5 717 1900 252 105 13 chr15 17349212 17349448 -86145526 + RMER6D LTR ERVK 322 606 -114 5 717 1113 158 5 10 chr15 17349485 17349677 -86145297 + Lx2 LINE L1 6444 6634 -363 5 717 1154 166 22 9 chr15 17349677 17349902 -86145072 + Lx2 LINE L1 6765 6992 -5 5 717 2201 225 28 30 chr15 17350304 17350845 -86144129 - RLTR20A LTR ERVK 0 541 2 5 717 207 0 0 0 chr15 17350982 17351005 -86143969 + (T)n Simple_repeat Simple_repeat 1 23 0 5 717 22 35 0 0 chr15 17353099 17353128 -86141846 + AT_rich Low_complexity Low_complexity 1 29 0 5 717 358 365 15 0 chr15 17353653 17353850 -86141124 + B3 SINE B2 5 204 -12 5 717 906 121 0 0 chr15 17354119 17354276 -86140698 + (TA)n Simple_repeat Simple_repeat 2 158 0 5 717 1113 70 7 0 chr15 17354279 17354422 -86140552 - B1_Mm SINE Alu -1 146 3 5 717 280 155 14 14 chr15 17354734 17354806 -86140168 + (TA)n Simple_repeat Simple_repeat 2 73 0 5 717 28 48 0 0 chr15 17356929 17356971 -86138003 + AT_rich Low_complexity Low_complexity 1 42 0 5 717 2459 91 136 21 chr15 17358659 17358961 -86136013 + IAPLTR2_Mm LTR ERVK 1 358 -117 5 717 180 0 0 0 chr15 17358961 17358981 -86135993 + (G)n Simple_repeat Simple_repeat 1 20 0 5 717 2459 91 136 21 chr15 17358981 17359104 -86135870 + IAPLTR2_Mm LTR ERVK 359 474 -1 5 717 23 33 0 0 chr15 17359377 17359407 -86135567 + AT_rich Low_complexity Low_complexity 1 30 0 5 717 2215 152 45 5 chr15 17359885 17360288 -86134686 - Lx LINE L1 -1 6653 6235 5 717 2805 115 4 76 chr15 17360288 17360674 -86134300 + Lx2 LINE L1 6117 6503 -494 5 717 1103 82 0 0 chr15 17360674 17360820 -86134154 + B1_Mus2 SINE Alu 2 147 0 5 717 2805 194 14 84 chr15 17360820 17360985 -86133989 + Lx2 LINE L1 6470 6613 -437 5 717 603 174 0 0 chr15 17361222 17361337 -86133637 + (TA)n Simple_repeat Simple_repeat 2 116 0 5 717 21 71 0 0 chr15 17362076 17362118 -86132856 + AT_rich Low_complexity Low_complexity 1 42 0 5 717 24 53 0 0 chr15 17362823 17362861 -86132113 + AT_rich Low_complexity Low_complexity 1 38 0 5 717 183 85 20 41 chr15 17364068 17364117 -86130857 + (TATAA)n Simple_repeat Simple_repeat 5 52 0 5 717 232 214 18 0 chr15 17364207 17364263 -86130711 + (TA)n Simple_repeat Simple_repeat 1 57 0 5 717 40 67 0 0 chr15 17364670 17364745 -86130229 + AT_rich Low_complexity Low_complexity 1 75 0 5 717 38 0 0 0 chr15 17365490 17365528 -86129446 + AT_rich Low_complexity Low_complexity 1 38 0 5 717 899 252 9 13 chr15 17365758 17365983 -86128991 - Lx9 LINE L1 -675 6969 6746 5 717 215 182 0 29 chr15 17366329 17366397 -86128577 + GA-rich Low_complexity Low_complexity 4 69 0 5 717 676 318 102 10 chr15 17366539 17367120 -86127854 + L1M2 LINE L1 4424 5059 -1087 5 717 216 0 0 0 chr15 17367162 17367186 -86127788 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 5 717 719 154 7 0 chr15 17367602 17367738 -86127236 + CT-rich Low_complexity Low_complexity 3 139 0 5 717 207 171 0 0 chr15 17369017 17369052 -86125922 + GA-rich Low_complexity Low_complexity 3 37 0 5 717 231 370 11 0 chr15 17369464 17369556 -86125418 - L2a LINE L2 -1 3425 3333 5 717 24 0 0 0 chr15 17370071 17370095 -86124879 + AT_rich Low_complexity Low_complexity 1 24 0 5 717 568 340 64 32 chr15 17370217 17370594 -86124380 + RMER5 LTR ERV1 146 534 0 5 717 21 0 0 0 chr15 17371482 17371503 -86123471 + AT_rich Low_complexity Low_complexity 1 21 0 5 717 1493 105 0 13 chr15 17372022 17372254 -86122720 - L1Md_F2 LINE L1 -3 6579 6351 5 717 6668 92 138 1 chr15 17372257 17373318 -86121656 - L1_Mm LINE L1 -520 5363 4158 5 717 2825 38 38 0 chr15 17373460 17373825 -86121149 - MT2_Mm LTR ERVL 0 493 115 5 717 554 0 15 0 chr15 17373825 17373891 -86121083 + (TA)n Simple_repeat Simple_repeat 1 67 0 5 717 43 56 0 0 chr15 17374082 17374153 -86120821 + AT_rich Low_complexity Low_complexity 1 71 0 5 717 231 36 0 0 chr15 17374184 17374212 -86120762 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 717 396 40 0 0 chr15 17374398 17374448 -86120526 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 717 24 0 0 0 chr15 17376553 17376577 -86118397 + AT_rich Low_complexity Low_complexity 1 24 0 5 717 683 322 26 18 chr15 17377484 17377756 -86117218 + Lx8 LINE L1 6668 6941 -532 5 717 182 139 47 0 chr15 17378102 17378145 -86116829 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 5 717 183 186 0 0 chr15 17378136 17378179 -86116795 + (CAGA)n Simple_repeat Simple_repeat 4 46 0 5 717 30 93 0 0 chr15 17379180 17379266 -86115708 + AT_rich Low_complexity Low_complexity 1 86 0 5 717 26 74 0 0 chr15 17379294 17379348 -86115626 + AT_rich Low_complexity Low_complexity 1 54 0 5 717 400 78 0 0 chr15 17379657 17379708 -86115266 - L1_Mus1 LINE L1 -188 6379 6329 5 717 1289 69 16 11 chr15 17379708 17379924 -86115050 + L1Md_F2 LINE L1 6372 6582 0 5 717 189 0 0 0 chr15 17380176 17380197 -86114777 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 717 249 139 0 0 chr15 17380197 17380240 -86114734 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 717 28 61 0 0 chr15 17381209 17381258 -86113716 + AT_rich Low_complexity Low_complexity 1 49 0 5 717 471 35 0 0 chr15 17381678 17381735 -86113239 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 5 717 483 338 24 31 chr15 17382205 17382498 -86112476 + B4 SINE B4 2 292 0 5 717 198 0 0 0 chr15 17382795 17382817 -86112157 + (TA)n Simple_repeat Simple_repeat 1 22 0 5 717 1958 185 11 0 chr15 17382833 17383201 -86111773 - Lx5 LINE L1 0 5877 5506 5 717 4130 229 63 40 chr15 17383206 17384290 -86110684 + Lx5 LINE L1 5934 7042 -8 5 717 601 213 0 12 chr15 17384295 17384461 -86110513 + GA-rich Low_complexity Low_complexity 4 167 0 5 717 196 329 133 0 chr15 17384805 17384948 -86110026 - L4 LINE RTE -477 1552 1391 5 717 1094 95 0 0 chr15 17385183 17385330 -86109644 + B1_Mus1 SINE Alu 2 148 0 5 717 367 118 12 12 chr15 17385330 17385416 -86109558 + (CAAAAA)n Simple_repeat Simple_repeat 3 88 0 5 717 287 113 16 0 chr15 17385609 17385671 -86109303 + (CAAAAA)n Simple_repeat Simple_repeat 2 64 0 6 717 23243 102 30 6 chr15 17385691 17390699 -86104275 + L1Md_F2 LINE L1 272 5586 -297 6 717 6562 83 61 20 chr15 17390700 17391652 -86103322 + L1Md_F2 LINE L1 5588 6578 -4 6 717 34 24 0 0 chr15 17391828 17391869 -86103105 + AT_rich Low_complexity Low_complexity 1 41 0 6 717 1032 122 0 0 chr15 17391871 17392009 -86102965 + B1_Mus1 SINE Alu 1 138 -10 6 717 276 53 0 0 chr15 17392009 17392047 -86102927 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 6 717 305 275 0 0 chr15 17392616 17392707 -86102267 - L1_Mur3 LINE L1 -429 5451 5361 6 717 1862 135 20 0 chr15 17392760 17393063 -86101911 - L1_Mus4 LINE L1 -563 6073 5765 6 717 2771 146 76 41 chr15 17393060 17393597 -86101377 + Lx LINE L1 6083 6638 -16 6 717 1507 65 0 5 chr15 17393597 17393799 -86101175 + L1_Mus2 LINE L1 6366 6566 0 6 717 1417 247 105 6 chr15 17393832 17394354 -86100620 + L1_Mur3 LINE L1 2945 3518 -2362 6 717 1199 91 6 0 chr15 17394354 17394529 -86100445 + (TTTC)n Simple_repeat Simple_repeat 2 177 0 6 717 5450 127 14 0 chr15 17394534 17395364 -86099610 - Lx LINE L1 -12 6642 5801 6 717 3666 36 0 7 chr15 17395371 17395812 -86099162 - L1Md_F2 LINE L1 -2 6580 6143 6 717 869 250 104 35 chr15 17395859 17396253 -86098721 - L1_Rod LINE L1 -538 5309 4889 6 717 338 180 0 0 chr15 17396275 17396336 -86098638 + L1_Rod LINE L1 4624 4684 -1163 6 717 740 264 38 49 chr15 17396344 17396691 -86098283 - L1_Rod LINE L1 -1237 4610 4268 6 717 612 91 0 0 chr15 17396714 17396802 -86098172 + (TC)n Simple_repeat Simple_repeat 2 89 0 6 717 370 315 0 0 chr15 17396970 17397059 -86097915 - RSINE1 SINE B4 -69 96 8 6 717 225 0 0 0 chr15 17397444 17397469 -86097505 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 6 717 203 49 95 24 chr15 17397471 17397513 -86097461 + A-rich Low_complexity Low_complexity 5 49 0 6 717 204 135 0 0 chr15 17398080 17398117 -86096857 + (CCCTG)n Simple_repeat Simple_repeat 3 39 0 6 717 214 191 21 0 chr15 17398117 17398164 -86096810 + CT-rich Low_complexity Low_complexity 2 49 0 6 717 344 399 9 18 chr15 17398388 17398605 -86096369 + Lx7 LINE L1 6535 6749 -947 6 717 207 233 35 65 chr15 17398644 17398814 -86096160 + (TTATA)n Simple_repeat Simple_repeat 5 169 0 6 717 2791 107 12 19 chr15 17398821 17399231 -86095743 - MTB_Mm LTR MaLR 0 407 1 6 717 23 0 0 0 chr15 17399809 17399832 -86095142 + AT_rich Low_complexity Low_complexity 1 23 0 6 717 34 0 0 0 chr15 17400149 17400183 -86094791 + AT_rich Low_complexity Low_complexity 1 34 0 6 717 21 36 0 0 chr15 17400298 17400326 -86094648 + AT_rich Low_complexity Low_complexity 1 28 0 6 717 3731 56 26 0 chr15 17400770 17401233 -86093741 - MT2C_Mm LTR ERVL 0 475 1 6 717 24 32 0 0 chr15 17401406 17401437 -86093537 + AT_rich Low_complexity Low_complexity 1 31 0 6 717 32 57 0 0 chr15 17401470 17401523 -86093451 + AT_rich Low_complexity Low_complexity 1 53 0 6 717 716 52 10 0 chr15 17401785 17401882 -86093092 + (TAGA)n Simple_repeat Simple_repeat 4 101 0 6 717 29 84 0 0 chr15 17402411 17402482 -86092492 + AT_rich Low_complexity Low_complexity 1 71 0 6 717 773 283 175 3 chr15 17403251 17403577 -86091397 + ORR1C2 LTR MaLR 3 384 0 6 717 2640 307 87 32 chr15 17403577 17404008 -86090966 + ORR1C2-int LTR MaLR 1 460 -910 6 717 6052 59 44 4 chr15 17404008 17404785 -86090189 + RLTR13C2 LTR ERVK 1 808 0 6 717 2640 302 74 47 chr15 17404785 17405564 -86089410 + ORR1C2-int LTR MaLR 461 1422 -158 6 717 1104 137 141 5 chr15 17405564 17405777 -86089197 + Lx LINE L1 6409 6650 -4 6 717 251 233 17 0 chr15 17405778 17405838 -86089136 + ORR1D-int LTR MaLR 1206 1266 -104 6 717 225 323 95 5 chr15 17406093 17406283 -86088691 + L1M3 LINE L1 2930 3136 -3007 6 717 247 282 131 29 chr15 17406317 17406591 -86088383 + L1M3 LINE L1 3229 3530 -2613 6 717 612 186 68 30 chr15 17406618 17406751 -86088223 - B1_Mur4 SINE Alu -2 148 11 6 717 943 294 93 19 chr15 17406761 17407073 -86087901 - RLTR18B LTR ERVK 0 512 178 6 717 183 80 0 0 chr15 17407272 17407297 -86087677 + (CAAG)n Simple_repeat Simple_repeat 3 27 0 6 717 1920 122 3 57 chr15 17407299 17407630 -86087344 - ORR1A2 LTR MaLR 0 327 15 6 717 285 288 87 68 chr15 17407696 17408005 -86086969 + L1M3 LINE L1 3841 4155 -1988 6 717 452 266 0 17 chr15 17408026 17408141 -86086833 + Lx6 LINE L1 7013 7125 -335 6 717 206 136 23 0 chr15 17408161 17408205 -86086769 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 6 717 270 0 0 0 chr15 17408289 17408319 -86086655 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 717 249 33 0 0 chr15 17408319 17408349 -86086625 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 717 1778 166 43 3 chr15 17408403 17408729 -86086245 - Lx LINE L1 -12 6642 6304 6 717 683 241 101 28 chr15 17408805 17408820 -86086154 - Lx4B LINE L1 -2 7056 7042 6 717 2879 73 36 8 chr15 17408820 17409205 -86085769 + MTA_Mm LTR MaLR 1 396 0 6 717 683 241 101 28 chr15 17409205 17409368 -86085606 - Lx4B LINE L1 -17 7041 6865 6 717 658 241 53 6 chr15 17409369 17409540 -86085434 - Lx4B LINE L1 -295 6763 6585 6 717 471 206 41 0 chr15 17409528 17409625 -86085349 + Lx5 LINE L1 6320 6420 -630 6 717 2932 38 0 0 chr15 17409674 17410020 -86084954 - ORR1A0 LTR MaLR 0 346 1 6 717 25 0 0 0 chr15 17410578 17410603 -86084371 + AT_rich Low_complexity Low_complexity 1 25 0 6 717 25 0 0 0 chr15 17410642 17410667 -86084307 + AT_rich Low_complexity Low_complexity 1 25 0 6 717 483 18 0 0 chr15 17411335 17411391 -86083583 + (TA)n Simple_repeat Simple_repeat 2 57 0 6 717 22 35 0 0 chr15 17411997 17412026 -86082948 + AT_rich Low_complexity Low_complexity 1 29 0 6 717 248 286 12 0 chr15 17412040 17412124 -86082850 + L1MC LINE L1 5659 5743 -2299 6 717 22 0 0 0 chr15 17412275 17412297 -86082677 + AT_rich Low_complexity Low_complexity 1 22 0 6 717 353 222 162 0 chr15 17412498 17412597 -86082377 - B3 SINE B2 -101 115 1 6 717 296 35 51 17 chr15 17412616 17412675 -86082299 + (CAAAAA)n Simple_repeat Simple_repeat 6 66 0 6 717 500 281 83 24 chr15 17412828 17412996 -86081978 + ORR1D1 LTR MaLR 6 183 -191 6 717 259 85 0 41 chr15 17412998 17413047 -86081927 + (TCTCC)n Simple_repeat Simple_repeat 1 47 0 6 717 638 233 100 5 chr15 17413048 17413064 -86081910 + ORR1D1 LTR MaLR 167 182 -192 6 717 615 27 0 0 chr15 17413064 17413137 -86081837 + (CA)n Simple_repeat Simple_repeat 1 73 0 6 717 638 233 100 5 chr15 17413137 17413174 -86081800 + ORR1D1 LTR MaLR 183 226 -148 6 717 2679 38 67 55 chr15 17413174 17413535 -86081439 - RLTR10B2 LTR ERVK 0 365 1 6 717 638 233 100 5 chr15 17413535 17413670 -86081304 + ORR1D1 LTR MaLR 227 372 -2 6 717 421 244 29 52 chr15 17413689 17413800 -86081174 - Lx9 LINE L1 -222 7422 7313 6 717 2884 89 13 2 chr15 17413800 17414196 -86080778 - MTB LTR MaLR 0 400 1 6 717 421 244 29 52 chr15 17414196 17414257 -86080717 - Lx9 LINE L1 -332 7312 7254 6 717 387 171 0 0 chr15 17414296 17414372 -86080602 + (TA)n Simple_repeat Simple_repeat 2 77 0 6 717 408 250 29 20 chr15 17414470 17414572 -86080402 + B1F2 SINE Alu 5 107 -42 6 717 236 174 0 0 chr15 17415460 17415506 -86079468 + A-rich Low_complexity Low_complexity 4 49 0 6 717 24 0 0 0 chr15 17416672 17416696 -86078278 + AT_rich Low_complexity Low_complexity 1 24 0 6 717 22 94 0 0 chr15 17416871 17416935 -86078039 + AT_rich Low_complexity Low_complexity 1 64 0 6 717 834 232 89 44 chr15 17418249 17418474 -86076500 - RMER6C LTR ERVK -453 237 3 6 717 198 0 0 0 chr15 17418562 17418584 -86076390 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 6 717 451 283 54 48 chr15 17418739 17418906 -86076068 - Lx7 LINE L1 -548 7148 6981 6 717 1369 196 113 21 chr15 17419152 17419406 -86075568 + ORR1B2 LTR MaLR 1 283 -84 6 717 2194 115 3 0 chr15 17419406 17419728 -86075246 - ORR1A2 LTR MaLR 0 327 5 6 717 1369 196 113 21 chr15 17419728 17419801 -86075173 + ORR1B2 LTR MaLR 284 358 -9 6 717 2512 201 83 17 chr15 17419814 17420391 -86074583 + ORR1B2-int LTR MaLR 5 619 -890 6 717 529 225 75 30 chr15 17420403 17420536 -86074438 + B1_Mur3 SINE Alu 4 142 -7 6 717 2864 181 107 21 chr15 17420724 17421343 -86073631 + RLTR33 LTR ERVK 7 678 0 6 717 853 218 62 5 chr15 17421343 17421536 -86073438 + ORR1B2-int LTR MaLR 792 995 -514 6 717 1444 194 70 17 chr15 17421523 17421864 -86073110 + ORR1B2 LTR MaLR 26 386 -8 6 717 506 308 34 29 chr15 17421919 17422123 -86072851 + MT2A LTR ERVL 228 432 -101 6 717 220 213 0 21 chr15 17422234 17422282 -86072692 + (CATA)n Simple_repeat Simple_repeat 1 47 0 6 717 233 160 20 0 chr15 17422294 17422344 -86072630 + MT2A LTR ERVL 483 533 0 6 717 381 109 0 0 chr15 17422823 17422887 -86072087 + (CA)n Simple_repeat Simple_repeat 1 64 0 6 717 758 309 168 6 chr15 17423505 17423827 -86071147 - MTEa LTR MaLR -1 378 5 6 717 198 0 0 0 chr15 17424086 17424108 -86070866 + (TC)n Simple_repeat Simple_repeat 2 23 0 6 717 480 185 0 0 chr15 17424108 17424238 -86070736 + (TA)n Simple_repeat Simple_repeat 1 130 0 6 717 351 177 21 10 chr15 17424391 17424488 -86070486 + (TAAA)n Simple_repeat Simple_repeat 4 101 0 6 717 309 357 35 7 chr15 17424501 17424642 -86070332 + RSINE1 SINE B4 21 165 0 6 717 306 0 0 0 chr15 17424770 17424804 -86070170 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 717 309 367 176 58 chr15 17425221 17425346 -86069628 + MER70B LTR ERVL 72 224 -354 6 717 1134 68 7 0 chr15 17425346 17425493 -86069481 - B1_Mus1 SINE Alu 0 148 1 6 717 309 367 176 58 chr15 17425493 17425731 -86069243 + MER70B LTR ERVL 225 478 -100 6 717 374 378 30 0 chr15 17426041 17426176 -86068798 - B3A SINE B2 -55 143 5 6 717 423 283 20 0 chr15 17426235 17426387 -86068587 - L1MA8 LINE L1 -2 6289 6135 6 717 317 211 50 40 chr15 17426825 17426924 -86068050 - RLTR15 LTR ERVK -241 118 19 6 717 647 215 0 71 chr15 17426924 17427094 -86067880 - ORR1A4 LTR MaLR -166 163 6 6 717 504 48 0 0 chr15 17428738 17428801 -86066173 + (TC)n Simple_repeat Simple_repeat 2 64 0 6 717 360 0 0 0 chr15 17428801 17428841 -86066133 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 717 2501 253 74 17 chr15 17430194 17430953 -86064021 + Lx6 LINE L1 6490 7291 -169 6 717 192 97 0 0 chr15 17432392 17432423 -86062551 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 89 363 313 93 43 chr15 17432538 17432678 -86062296 - PB1D10 SINE Alu -2 147 1 6 718 907 103 87 14 chr15 17432717 17432855 -86062119 + B1_Mus1 SINE Alu 1 148 0 6 718 358 65 0 31 chr15 17432871 17432935 -86062039 + (CCAA)n Simple_repeat Simple_repeat 2 63 0 6 718 484 351 71 52 chr15 17433062 17433584 -86061390 - L1M4 LINE L1 -886 5260 4729 6 718 260 122 41 0 chr15 17433709 17433758 -86061216 + CT-rich Low_complexity Low_complexity 2 52 0 6 718 964 249 71 58 chr15 17433760 17434156 -86060818 - RLTR12B LTR ERVK -80 448 48 7 718 754 172 145 5 chr15 17434215 17434391 -86060583 - ORR1C1 LTR MaLR -7 371 131 7 718 298 211 43 32 chr15 17434463 17434556 -86060418 - RLTR10D LTR ERVK 0 359 266 7 718 531 0 0 0 chr15 17434562 17434621 -86060353 + (TC)n Simple_repeat Simple_repeat 2 60 0 7 718 1050 96 7 0 chr15 17434640 17434786 -86060188 - B1_Mus1 SINE Alu 0 148 2 7 718 866 292 159 89 chr15 17434814 17435298 -86059676 + Lx6 LINE L1 6644 7161 -299 7 718 2895 151 8 10 chr15 17435323 17435817 -86059157 - Lx2 LINE L1 -2 6995 6503 7 718 31 26 0 0 chr15 17435836 17435874 -86059100 + AT_rich Low_complexity Low_complexity 1 38 0 7 718 495 0 0 0 chr15 17435899 17435954 -86059020 + (TATTG)n Simple_repeat Simple_repeat 3 57 0 7 718 218 294 99 99 chr15 17435954 17436066 -86058908 - RSINE1 SINE B4 -8 157 45 7 718 457 315 35 7 chr15 17436129 17436273 -86058701 - B1_Mur2 SINE Alu 0 149 2 7 718 44 106 0 0 chr15 17436336 17436506 -86058468 + AT_rich Low_complexity Low_complexity 1 170 0 7 718 359 344 30 18 chr15 17437341 17437507 -86057467 - MER76 LTR ERVL -24 667 500 7 718 384 22 0 0 chr15 17437906 17437951 -86057023 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 718 620 294 24 5 chr15 17438374 17438586 -86056388 - B3 SINE B2 0 216 1 7 718 603 51 0 0 chr15 17438942 17439021 -86055953 + (TG)n Simple_repeat Simple_repeat 2 80 0 7 718 450 0 0 0 chr15 17440334 17440384 -86054590 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 718 513 0 0 0 chr15 17440384 17440440 -86054534 + (GA)n Simple_repeat Simple_repeat 2 58 0 7 718 222 191 0 0 chr15 17440442 17440489 -86054485 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 718 618 224 73 27 chr15 17440646 17440866 -86054108 - L1ME3A LINE L1 -13 6160 5931 7 718 4812 164 50 8 chr15 17442706 17443611 -86051363 - Lx3C LINE L1 -3 6973 6031 7 718 12214 54 20 24 chr15 17443617 17444744 -86050230 - L1Md_F2 LINE L1 0 6582 5467 7 718 3615 44 7 0 chr15 17444744 17445177 -86049797 - RLTR10C LTR ERVK 0 436 1 7 718 12214 65 11 4 chr15 17445177 17446358 -86048616 - L1Md_F2 LINE L1 -417 5466 4280 7 718 1354 36 0 0 chr15 17446359 17446527 -86048447 + L1Md_F2 LINE L1 4109 4276 -1607 7 718 3605 146 13 22 chr15 17446526 17447286 -86047688 - Lx3C LINE L1 -927 6046 5294 7 718 30 0 0 0 chr15 17447544 17447574 -86047400 + AT_rich Low_complexity Low_complexity 1 30 0 7 718 2749 230 9 3 chr15 17447598 17448175 -86046799 - Lx4B LINE L1 -313 6745 6166 7 718 2053 218 217 7 chr15 17448189 17448819 -86046155 + Lx4B LINE L1 5377 6143 -915 7 718 381 321 45 6 chr15 17449770 17449927 -86045047 - RMER15 LTR ERVL -391 184 22 7 718 275 265 15 0 chr15 17450186 17450254 -86044720 - RMER15 LTR ERVL -103 472 404 7 718 189 74 0 0 chr15 17450792 17450819 -86044155 + (TATG)n Simple_repeat Simple_repeat 2 28 0 7 718 21 36 0 0 chr15 17450866 17450894 -86044080 + AT_rich Low_complexity Low_complexity 1 28 0 7 718 213 193 35 0 chr15 17451157 17451214 -86043760 + (TA)n Simple_repeat Simple_repeat 1 59 0 7 718 29 28 0 0 chr15 17451611 17451647 -86043327 + AT_rich Low_complexity Low_complexity 1 36 0 7 718 24 0 0 0 chr15 17452584 17452608 -86042366 + AT_rich Low_complexity Low_complexity 1 24 0 7 718 833 208 0 0 chr15 17453302 17453470 -86041504 + L1_Mur2 LINE L1 5131 5298 -579 7 718 4615 178 13 4 chr15 17453462 17454293 -86040681 - Lx2B LINE L1 -287 6713 5875 7 718 3143 157 83 0 chr15 17454296 17454933 -86040041 - MusHAL1 LINE L1 -465 2247 1558 7 718 600 178 0 0 chr15 17454947 17455054 -86039920 + MusHAL1 LINE L1 1456 1562 -1150 7 718 21 82 0 0 chr15 17455763 17455812 -86039162 + AT_rich Low_complexity Low_complexity 1 49 0 7 718 428 0 19 0 chr15 17456493 17456545 -86038429 + (TA)n Simple_repeat Simple_repeat 1 53 0 7 718 294 57 86 0 chr15 17456619 17456689 -86038285 + (TA)n Simple_repeat Simple_repeat 1 76 0 7 718 1302 186 20 24 chr15 17456696 17456949 -86038025 + RLTR23 LTR ERV1 179 430 0 7 718 3120 251 37 35 chr15 17457291 17458288 -86036686 + L1_Mur3 LINE L1 4792 5790 -90 7 718 288 91 0 0 chr15 17458363 17458407 -86036567 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 7 718 1167 200 47 9 chr15 17458511 17458743 -86036231 + Lx4A LINE L1 6783 7023 -35 7 718 23 33 0 0 chr15 17459125 17459155 -86035819 + AT_rich Low_complexity Low_complexity 1 30 0 7 718 22 0 0 0 chr15 17459338 17459360 -86035614 + AT_rich Low_complexity Low_complexity 1 22 0 7 718 605 344 100 9 chr15 17459500 17459729 -86035245 - B4 SINE B4 -32 260 11 7 718 21 36 0 0 chr15 17459963 17459991 -86034983 + AT_rich Low_complexity Low_complexity 1 28 0 7 718 22 0 0 0 chr15 17460031 17460053 -86034921 + AT_rich Low_complexity Low_complexity 1 22 0 7 718 372 351 141 19 chr15 17460510 17460706 -86034268 - Lx8 LINE L1 -122 7351 7147 7 718 3019 145 19 15 chr15 17460706 17461232 -86033742 - Lx2 LINE L1 0 6997 6470 7 718 372 351 141 19 chr15 17461232 17461519 -86033455 - Lx8 LINE L1 -327 7146 6810 7 718 498 33 0 0 chr15 17461899 17461959 -86033015 + (TA)n Simple_repeat Simple_repeat 1 60 0 7 718 378 0 0 0 chr15 17463748 17463790 -86031184 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 718 24 53 0 0 chr15 17463984 17464022 -86030952 + AT_rich Low_complexity Low_complexity 1 38 0 7 718 21 0 0 0 chr15 17464039 17464060 -86030914 + AT_rich Low_complexity Low_complexity 1 21 0 7 718 432 37 0 0 chr15 17464330 17464384 -86030590 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 718 23 0 0 0 chr15 17464514 17464537 -86030437 + AT_rich Low_complexity Low_complexity 1 23 0 7 718 24 0 0 0 chr15 17464936 17464960 -86030014 + AT_rich Low_complexity Low_complexity 1 24 0 7 718 489 318 10 87 chr15 17465258 17465445 -86029529 + B3A SINE B2 7 180 -18 7 718 405 0 0 0 chr15 17465445 17465490 -86029484 + (TA)n Simple_repeat Simple_repeat 1 45 0 7 718 489 318 10 87 chr15 17465490 17465509 -86029465 + B3A SINE B2 181 197 -1 7 718 22 35 0 0 chr15 17466064 17466093 -86028881 + AT_rich Low_complexity Low_complexity 1 29 0 7 718 24 32 0 0 chr15 17466312 17466343 -86028631 + AT_rich Low_complexity Low_complexity 1 31 0 7 718 1061 103 7 0 chr15 17466965 17467111 -86027863 + B1_Mus1 SINE Alu 1 147 -1 7 718 189 74 0 0 chr15 17467116 17467143 -86027831 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 7 718 4634 162 2 9 chr15 17467235 17468033 -86026941 + Lx3B LINE L1 6176 6968 -5 7 718 180 0 0 0 chr15 17468044 17468064 -86026910 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 7 718 304 379 77 10 chr15 17468254 17468462 -86026512 + L1MEc LINE L1 208 429 -5971 7 718 26415 131 68 60 chr15 17468898 17469674 -86025300 + L1_Mus3 LINE L1 436 1250 -5388 7 718 239 0 32 0 chr15 17469674 17469705 -86025269 + (CAA)n Simple_repeat Simple_repeat 2 33 0 7 718 26415 141 8 44 chr15 17469705 17470946 -86024028 + L1_Mus3 LINE L1 1251 2458 -3425 7 718 965 55 0 8 chr15 17470946 17471075 -86023899 + B1_Mm SINE Alu 20 147 0 7 718 26415 141 8 44 chr15 17471075 17472112 -86022862 + L1_Mus3 LINE L1 2459 3470 -2413 7 718 3268 43 2 8 chr15 17472112 17472510 -86022464 + MTA_Mm LTR MaLR 1 396 0 7 718 26415 130 29 32 chr15 17472510 17475595 -86019379 + L1_Mus3 LINE L1 3471 6638 0 7 718 475 361 10 16 chr15 17476299 17476493 -86018481 - Lx8 LINE L1 -147 7326 7134 7 718 371 235 282 0 chr15 17476493 17476642 -86018332 - ORR1D2 LTR MaLR 0 370 180 7 718 17856 74 14 3 chr15 17476674 17478006 -86016968 - L1Md_F2 LINE L1 0 6582 5251 7 718 255 61 0 0 chr15 17478006 17478039 -86016935 + (TA)n Simple_repeat Simple_repeat 1 33 0 7 718 17856 80 25 5 chr15 17478039 17479889 -86015085 - L1Md_F2 LINE L1 -633 5250 3349 7 718 8089 88 2 0 chr15 17479887 17481017 -86013957 + L1Md_F2 LINE L1 2176 3307 -2576 7 718 1824 63 0 0 chr15 17481025 17481262 -86013712 - L1Md_T LINE L1 -1 6581 6345 7 718 12020 26 0 0 chr15 17481262 17483125 -86011849 + L1Md_T LINE L1 4481 6343 -239 7 718 836 346 110 22 chr15 17483193 17483876 -86011098 - Lx8 LINE L1 -562 6911 6169 7 718 413 289 13 39 chr15 17483952 17484107 -86010867 - Lx2B LINE L1 -5 6995 6845 7 718 1158 61 0 7 chr15 17484591 17484739 -86010235 - B1_Mm SINE Alu 0 147 1 7 718 23 0 0 0 chr15 17485219 17485242 -86009732 + AT_rich Low_complexity Low_complexity 1 23 0 7 718 21 0 0 0 chr15 17485865 17485886 -86009088 + AT_rich Low_complexity Low_complexity 1 21 0 7 718 13097 58 5 1 chr15 17485911 17488292 -86006682 - L1Md_F3 LINE L1 0 6584 4195 7 718 216 214 0 0 chr15 17488385 17488441 -86006533 + (TA)n Simple_repeat Simple_repeat 2 57 0 7 718 2813 107 22 0 chr15 17488669 17489082 -86005892 - BGLII_Mus LTR ERVK 0 422 1 7 718 4034 190 59 3 chr15 17489186 17490038 -86004936 + Lx3C LINE L1 5846 6744 -232 7 718 3264 213 30 10 chr15 17490031 17490742 -86004232 + Lx2B LINE L1 6262 6986 -14 7 718 234 0 0 0 chr15 17490742 17490768 -86004206 + (TA)n Simple_repeat Simple_repeat 1 26 0 7 718 34375 71 7 11 chr15 17490953 17496196 -85998778 + L1Md_F3 LINE L1 422 5589 -297 7 718 7676 60 2 2 chr15 17496196 17497222 -85997752 + L1Md_F3 LINE L1 5590 6587 0 7 718 248 355 36 12 chr15 17497517 17497685 -85997289 - L1M3 LINE L1 -576 5592 5421 7 718 285 396 35 15 chr15 17497700 17497900 -85997074 + MTE2b LTR MaLR 19 222 -157 7 718 710 253 39 0 chr15 17498229 17498411 -85996563 - URR1A DNA MER1_type -1 225 37 7 718 383 340 42 61 chr15 17498446 17498709 -85996265 - MLT2B1 LTR ERVL -262 258 1 7 718 22 35 0 0 chr15 17498954 17498983 -85995991 + AT_rich Low_complexity Low_complexity 1 29 0 7 718 396 0 0 0 chr15 17499923 17499967 -85995007 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 718 306 0 0 0 chr15 17499967 17500000 -85994974 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 718 189 214 0 0 chr15 17500000 17500042 -85994932 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 718 3723 184 28 20 chr15 17500260 17501014 -85993960 - Lx LINE L1 -5 6649 5890 2 718 522 148 0 11 chr15 17501015 17501104 -85993870 - L1_Mus2 LINE L1 -82 6484 6397 3 718 315 93 0 0 chr15 17501085 17501128 -85993846 - L1_Mm LINE L1 -708 5175 5133 4 718 1608 318 41 26 chr15 17501130 17501912 -85993062 + SRV_MM-int LTR ERVK 1799 2592 -3575 5 718 2843 57 177 7 chr15 17502148 17502554 -85992420 + IAPLTR2_Mm LTR ERVK 1 475 0 6 718 25829 46 29 44 chr15 17502555 17505994 -85988980 + IAPEz-int LTR ERVK 9 3393 -3088 6 718 8365 137 49 49 chr15 17505991 17507532 -85987442 - IAPEz-int LTR ERVK -4936 1545 6 7 718 2175 109 18 6 chr15 17507532 17507863 -85987111 - IAPLTR1a_Mm LTR ERVK -2 335 1 7 718 25609 38 5 3 chr15 17507863 17510911 -85984063 + IAPEz-int LTR ERVK 3427 6479 -2 6 718 2498 34 50 41 chr15 17510913 17511277 -85983697 + IAPLTR2_Mm LTR ERVK 1 367 -44 6 718 653 195 28 0 chr15 17511284 17511432 -85983542 - L1_Mur1 LINE L1 -724 5579 5432 8 718 322 122 12 12 chr15 17512006 17512076 -85982898 + (TTTG)n Simple_repeat Simple_repeat 3 72 0 9 718 1116 82 0 0 chr15 17512076 17512222 -85982752 - B1_Mm SINE Alu 0 147 2 1 718 322 122 12 12 chr15 17512222 17512234 -85982740 + (TTTG)n Simple_repeat Simple_repeat 3 14 0 1 718 455 33 16 0 chr15 17512630 17512691 -85982283 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 718 323 224 106 0 chr15 17512800 17512885 -85982089 - L1MA6 LINE L1 -151 6149 6056 1 718 276 264 90 20 chr15 17513337 17513502 -85981472 - Lx3B LINE L1 -8 7050 6803 1 718 3367 186 58 7 chr15 17513522 17514206 -85980768 - L1_Mur2 LINE L1 0 5886 5168 1 718 3880 176 16 28 chr15 17514209 17515062 -85979912 - L1_Mur2 LINE L1 -1210 4667 3825 1 718 641 140 35 0 chr15 17515066 17515180 -85979794 - L1_Mur2 LINE L1 -2238 3648 3531 1 718 5289 229 66 12 chr15 17515176 17516500 -85978474 + Lx4B LINE L1 5645 7039 -19 1 718 411 73 0 0 chr15 17516500 17516555 -85978419 + (TGAA)n Simple_repeat Simple_repeat 3 57 0 1 718 394 326 123 6 chr15 17516556 17516735 -85978239 + MTD LTR MaLR 206 405 -14 1 718 22 0 0 0 chr15 17516922 17516944 -85978030 + AT_rich Low_complexity Low_complexity 1 22 0 1 718 189 171 0 0 chr15 17517644 17517679 -85977295 + (CATA)n Simple_repeat Simple_repeat 2 36 0 2 718 40 59 0 0 chr15 17517906 17517974 -85977000 + AT_rich Low_complexity Low_complexity 1 68 0 2 718 28 0 0 0 chr15 17518256 17518284 -85976690 + AT_rich Low_complexity Low_complexity 1 28 0 2 718 1759 210 60 201 chr15 17518407 17519088 -85975886 + RMER19C LTR ERVK 26 610 -1 2 718 326 337 81 35 chr15 17519094 17519291 -85975683 + ORR1D2 LTR MaLR 112 327 -32 2 718 561 55 0 0 chr15 17520110 17520183 -85974791 + (TA)n Simple_repeat Simple_repeat 2 74 0 2 718 325 338 14 0 chr15 17520590 17520732 -85974242 - L1MC LINE L1 -1967 5818 5675 2 718 184 77 51 0 chr15 17520918 17520957 -85974017 + (TTTTG)n Simple_repeat Simple_repeat 5 45 0 2 718 234 0 0 0 chr15 17521319 17521345 -85973629 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 718 298 337 51 0 chr15 17521345 17521443 -85973531 - RMER12 LTR ERVK -471 851 749 2 718 213 47 70 0 chr15 17521711 17521754 -85973220 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 3 718 981 97 13 40 chr15 17521761 17521911 -85973063 - B1_Mm SINE Alu 0 147 2 3 718 984 132 0 0 chr15 17522715 17522866 -85972108 + B2_Mm2 SINE B2 2 152 -43 3 718 23 54 0 0 chr15 17523121 17523158 -85971816 + AT_rich Low_complexity Low_complexity 1 37 0 3 718 384 22 0 0 chr15 17523174 17523219 -85971755 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 718 21 0 0 0 chr15 17523361 17523382 -85971592 + AT_rich Low_complexity Low_complexity 1 21 0 3 718 21 0 0 0 chr15 17524354 17524375 -85970599 + AT_rich Low_complexity Low_complexity 1 21 0 3 718 21 0 0 0 chr15 17524748 17524769 -85970205 + AT_rich Low_complexity Low_complexity 1 21 0 3 718 245 345 34 11 chr15 17525848 17525936 -85969038 + B4A SINE B4 1 90 -202 3 718 1206 116 63 0 chr15 17525942 17526131 -85968843 + Lx LINE L1 5588 5788 -866 3 718 347 238 46 73 chr15 17526139 17526248 -85968726 + MT2B LTR ERVL 151 256 -345 4 718 702 74 17 61 chr15 17526178 17526293 -85968681 + B1_Mus2 SINE Alu 38 147 0 4 718 297 145 0 0 chr15 17526295 17526357 -85968617 + (A)n Simple_repeat Simple_repeat 1 62 0 4 718 307 326 59 23 chr15 17526885 17527105 -85967869 - L1MA4 LINE L1 -317 5983 5756 4 718 873 350 44 38 chr15 17527112 17527477 -85967497 - MTEa LTR MaLR -12 367 1 4 718 207 100 0 0 chr15 17527562 17527592 -85967382 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 4 718 251 213 53 0 chr15 17527654 17527729 -85967245 - L1MA4 LINE L1 -697 5606 5528 4 718 23 33 0 0 chr15 17527964 17527994 -85966980 + AT_rich Low_complexity Low_complexity 1 30 0 4 718 22 35 0 0 chr15 17528012 17528041 -85966933 + AT_rich Low_complexity Low_complexity 1 29 0 4 718 323 252 52 11 chr15 17529249 17529359 -85965615 - MTEa LTR MaLR -245 134 15 4 718 248 258 23 26 chr15 17529363 17529449 -85965525 - L1M2 LINE L1 -522 5769 5691 4 718 1170 88 0 0 chr15 17529473 17529689 -85965285 + (TG)n Simple_repeat Simple_repeat 1 216 0 5 718 26 30 0 0 chr15 17529930 17529963 -85965011 + AT_rich Low_complexity Low_complexity 1 33 0 5 718 334 369 75 38 chr15 17530816 17531002 -85963972 - ID_B1 SINE B4 -24 200 8 5 718 4004 137 9 12 chr15 17531005 17531672 -85963302 - Lx2 LINE L1 0 6997 6333 5 718 710 289 53 120 chr15 17531996 17532445 -85962529 + RLTR23 LTR ERV1 8 426 -4 5 718 210 176 0 0 chr15 17532545 17532596 -85962378 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 718 868 326 95 19 chr15 17532752 17533327 -85961647 + Lx6 LINE L1 6455 7376 -84 5 718 476 0 34 0 chr15 17533331 17533390 -85961584 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 5 718 3164 172 34 94 chr15 17534443 17535736 -85959238 - L1Md_F LINE L1 -4180 1703 513 5 718 279 0 0 0 chr15 17535736 17535767 -85959207 + (T)n Simple_repeat Simple_repeat 1 31 0 5 718 6709 85 8 2 chr15 17536125 17537042 -85957932 + L1_Mus2 LINE L1 5645 6566 0 6 718 301 123 31 0 chr15 17537153 17537218 -85957756 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 6 718 725 177 111 47 chr15 17537997 17538169 -85956805 - B2_Mm2 SINE B2 -11 184 2 6 718 393 70 0 0 chr15 17539118 17539175 -85955799 + (TTTTA)n Simple_repeat Simple_repeat 3 59 0 6 718 344 22 22 0 chr15 17540712 17540757 -85954217 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 718 500 230 88 7 chr15 17540757 17540893 -85954081 - Lx4B LINE L1 -15 7043 6897 6 718 692 314 44 37 chr15 17541185 17541506 -85953468 + Lx6 LINE L1 7112 7434 -26 6 718 29 28 0 0 chr15 17542562 17542598 -85952376 + AT_rich Low_complexity Low_complexity 1 36 0 6 718 1596 244 31 46 chr15 17543149 17543683 -85951291 + RMER4B LTR ERVK 17 574 -11 6 718 965 158 6 0 chr15 17543927 17544092 -85950882 + URR1A DNA MER1_type 61 226 0 6 718 1303 46 29 0 chr15 17545387 17545560 -85949414 + L1Md_A LINE L1 6404 6581 -1 7 718 225 0 0 0 chr15 17545740 17545765 -85949209 + (TA)n Simple_repeat Simple_repeat 1 25 0 7 718 490 295 56 26 chr15 17546907 17547175 -85947799 + Lx9 LINE L1 6652 6927 -717 7 718 819 333 65 34 chr15 17547209 17547743 -85947231 + Lx9 LINE L1 6998 7548 -96 7 718 21 0 0 0 chr15 17548084 17548105 -85946869 + AT_rich Low_complexity Low_complexity 1 21 0 7 718 258 143 0 0 chr15 17548796 17548845 -85946129 + (GA)n Simple_repeat Simple_repeat 2 50 0 7 718 6700 132 20 9 chr15 17549386 17550800 -85944174 - Lx LINE L1 -5 6649 5219 7 718 30 59 0 0 chr15 17551410 17551461 -85943513 + AT_rich Low_complexity Low_complexity 1 51 0 7 718 245 100 20 0 chr15 17551673 17551723 -85943251 + (TTTTTG)n Simple_repeat Simple_repeat 3 53 0 7 718 216 0 0 0 chr15 17551748 17551772 -85943202 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 7 718 243 272 32 95 chr15 17551772 17551898 -85943076 - RMER4A LTR ERVK -332 134 17 7 718 228 67 0 0 chr15 17553851 17553881 -85941093 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 8 718 546 283 80 48 chr15 17554098 17554410 -85940564 - Lx9 LINE L1 -369 7275 6954 8 718 22 56 0 0 chr15 17554927 17554963 -85940011 + AT_rich Low_complexity Low_complexity 1 36 0 8 718 1638 131 19 11 chr15 17555066 17555337 -85939637 - Lx3_Mus LINE L1 -8 7001 6729 8 718 1319 103 22 5 chr15 17555336 17555521 -85939453 - Lx3_Mus LINE L1 -376 6605 6418 8 718 240 228 0 0 chr15 17555611 17555668 -85939306 - L1_Mur2 LINE L1 -1447 4430 4374 8 718 486 88 0 0 chr15 17555668 17555736 -85939238 + (TTG)n Simple_repeat Simple_repeat 2 69 0 8 718 2355 209 43 29 chr15 17555738 17556385 -85938589 - L1_Mur2 LINE L1 -2405 3472 2817 8 718 2292 232 80 39 chr15 17556384 17557214 -85937760 + Lx4B LINE L1 5532 6429 -629 8 718 730 326 60 10 chr15 17557217 17557518 -85937456 + Lx4B LINE L1 6732 7047 -3 8 718 53 57 0 0 chr15 17557797 17557885 -85937089 + AT_rich Low_complexity Low_complexity 1 88 0 8 718 3588 47 0 2 chr15 17559101 17559551 -85935423 - L1Md_F3 LINE L1 -14 6570 6122 8 718 25 31 0 0 chr15 17561241 17561273 -85933701 + AT_rich Low_complexity Low_complexity 1 32 0 8 718 3056 46 15 3 chr15 17561538 17561927 -85933047 - MTA_Mm LTR MaLR 0 396 3 9 718 212 276 0 22 chr15 17562200 17562289 -85932685 + (TA)n Simple_repeat Simple_repeat 2 88 0 9 718 349 319 96 12 chr15 17562461 17562712 -85932262 + MER57F LTR ERV1 1 272 -164 9 718 26 0 0 0 chr15 17562990 17563016 -85931958 + AT_rich Low_complexity Low_complexity 1 26 0 9 89 1034 313 29 38 chr15 17563271 17563722 -85931252 + Lx9 LINE L1 6773 7219 -425 9 719 246 294 15 0 chr15 17563891 17563959 -85931015 - B4 SINE B4 -206 86 18 9 719 251 293 110 0 chr15 17565246 17565328 -85929646 + MER5B DNA MER1_type 60 150 -28 9 719 21 0 0 0 chr15 17565890 17565911 -85929063 + AT_rich Low_complexity Low_complexity 1 21 0 9 719 27 0 0 0 chr15 17566028 17566055 -85928919 + AT_rich Low_complexity Low_complexity 1 27 0 9 719 4635 225 55 23 chr15 17567449 17568196 -85926778 + RMER12 LTR ERVK 1 767 -555 9 719 513 0 0 0 chr15 17568196 17568253 -85926721 + (TCCA)n Simple_repeat Simple_repeat 3 59 0 1 719 4635 225 55 23 chr15 17568253 17568641 -85926333 + RMER12 LTR ERVK 768 1172 -150 9 719 10523 73 11 1 chr15 17568664 17570755 -85924219 - L1Md_F2 LINE L1 -3 6579 4477 1 719 207 0 0 0 chr15 17571636 17571659 -85923315 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 1 719 254 148 0 18 chr15 17571831 17571886 -85923088 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 1 719 222 37 0 0 chr15 17572150 17572177 -85922797 + (T)n Simple_repeat Simple_repeat 1 27 0 1 719 1135 74 0 0 chr15 17572177 17572325 -85922649 - B1_Mus1 SINE Alu 0 148 1 1 719 2946 73 0 0 chr15 17572402 17572787 -85922187 - L1_Mus1 LINE L1 -1 6566 6182 1 719 958 84 6 6 chr15 17572812 17572968 -85922006 + (TC)n Simple_repeat Simple_repeat 1 156 0 1 719 264 30 0 0 chr15 17572968 17573000 -85921974 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 719 2779 113 2 7 chr15 17573169 17573578 -85921396 - MTB_Mm LTR MaLR 0 407 1 1 719 946 315 44 18 chr15 17574382 17574721 -85920253 + RMER15 LTR ERVL 214 561 -14 1 719 21 36 0 0 chr15 17576042 17576070 -85918904 + AT_rich Low_complexity Low_complexity 1 28 0 1 719 5112 110 21 10 chr15 17576229 17577029 -85917945 + Lx3_Mus LINE L1 6201 7009 0 1 719 41 36 0 0 chr15 17577029 17577084 -85917890 + AT_rich Low_complexity Low_complexity 1 55 0 1 719 756 211 17 35 chr15 17578254 17578426 -85916548 + RLTR40 LTR ERVK 8 176 -641 1 719 1121 99 0 0 chr15 17578432 17578584 -85916390 + B2_Mm2 SINE B2 4 155 -40 1 719 402 21 0 0 chr15 17578584 17578631 -85916343 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 1 719 1556 244 86 24 chr15 17578747 17579167 -85915807 + RLTR40 LTR ERVK 372 817 0 1 719 325 320 24 16 chr15 17579223 17579347 -85915627 + MTE2b LTR MaLR 3 127 -252 1 719 305 18 33 50 chr15 17579416 17579476 -85915498 + (TTTTTG)n Simple_repeat Simple_repeat 2 60 0 1 719 725 151 0 0 chr15 17580392 17580531 -85914443 - Lx3_Mus LINE L1 0 7009 6871 1 719 22 70 0 0 chr15 17581786 17581829 -85913145 + AT_rich Low_complexity Low_complexity 1 43 0 1 719 575 294 60 53 chr15 17582629 17582895 -85912079 + ORR1E LTR MaLR 36 303 -56 1 719 4704 74 5 12 chr15 17582988 17583632 -85911342 + L1_Mus1 LINE L1 5927 6565 -2 1 719 180 0 0 0 chr15 17583636 17583656 -85911318 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1 719 24 0 0 0 chr15 17584414 17584438 -85910536 + AT_rich Low_complexity Low_complexity 1 24 0 1 719 21 36 0 0 chr15 17584543 17584571 -85910403 + AT_rich Low_complexity Low_complexity 1 28 0 1 719 365 377 0 20 chr15 17584733 17584882 -85910092 + B3A SINE B2 48 193 -5 1 719 22 35 0 0 chr15 17585692 17585721 -85909253 + AT_rich Low_complexity Low_complexity 1 29 0 1 719 1221 344 52 29 chr15 17586245 17586864 -85908110 - Lx8 LINE L1 -136 7337 6705 1 719 385 331 67 35 chr15 17586997 17587251 -85907723 + Lx9 LINE L1 6924 7185 -459 1 719 3093 139 35 34 chr15 17587251 17587787 -85907187 - Lx LINE L1 -2 6652 6116 1 719 3708 87 18 14 chr15 17587787 17588406 -85906568 + L1_Mus4 LINE L1 5488 6110 -526 1 719 538 308 61 7 chr15 17588434 17588712 -85906262 + Lx9 LINE L1 7200 7492 -152 1 719 21 36 0 0 chr15 17588815 17588843 -85906131 + AT_rich Low_complexity Low_complexity 1 28 0 1 719 28 29 0 0 chr15 17589942 17589977 -85904997 + AT_rich Low_complexity Low_complexity 1 35 0 1 719 37 23 0 0 chr15 17590021 17590065 -85904909 + AT_rich Low_complexity Low_complexity 1 44 0 1 719 22 35 0 0 chr15 17590674 17590703 -85904271 + AT_rich Low_complexity Low_complexity 1 29 0 1 719 1976 188 36 5 chr15 17590850 17591279 -85903695 + Lx LINE L1 6183 6961 -47 1 719 180 97 0 0 chr15 17591280 17591311 -85903663 + (CAGG)n Simple_repeat Simple_repeat 2 32 0 1 719 668 177 0 21 chr15 17591313 17591457 -85903517 + Lx LINE L1 6504 6644 -10 1 719 232 270 0 0 chr15 17591602 17591665 -85903309 + T-rich Low_complexity Low_complexity 1 63 0 1 719 3878 121 28 82 chr15 17591837 17592631 -85902343 - RMER17A LTR ERVK 0 751 1 1 719 669 263 156 64 chr15 17593404 17593914 -85901060 - RMER20A LTR ERVK -58 569 1 1 719 523 40 13 13 chr15 17594117 17594192 -85900782 + (TTTA)n Simple_repeat Simple_repeat 2 76 0 1 719 5274 202 24 19 chr15 17594194 17595299 -85899675 - Lx4A LINE L1 -19 7039 5930 1 719 3111 234 217 9 chr15 17595303 17596265 -85898709 - Lx4B LINE L1 -6 7052 5891 1 719 26 50 0 0 chr15 17598152 17598192 -85896782 + AT_rich Low_complexity Low_complexity 1 40 0 1 719 1604 191 32 142 chr15 17598679 17599142 -85895832 + RMER15 LTR ERVL 4 415 -160 1 719 23 33 0 0 chr15 17599145 17599175 -85895799 + AT_rich Low_complexity Low_complexity 1 30 0 1 719 21 0 0 0 chr15 17599347 17599368 -85895606 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 845 313 111 3 chr15 17599510 17599834 -85895140 - ORR1D2 LTR MaLR -8 362 4 1 719 1445 306 102 20 chr15 17600700 17601161 -85893813 - Lx8 LINE L1 -478 6995 6483 1 719 3866 185 94 13 chr15 17601161 17601956 -85893018 + RMER13A LTR ERVK 1 860 0 1 719 1445 306 102 20 chr15 17601956 17602085 -85892889 - Lx8 LINE L1 -991 6482 6357 1 719 577 111 275 0 chr15 17602578 17602699 -85892275 - L1_Mus2 LINE L1 -3 6579 6431 1 719 893 302 75 31 chr15 17603646 17604005 -85890969 + MTE2b LTR MaLR 1 375 -4 1 719 745 254 100 151 chr15 17604079 17604534 -85890440 + Lx9 LINE L1 7096 7520 -124 1 719 432 0 0 0 chr15 17604534 17604582 -85890392 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 719 745 254 100 151 chr15 17604582 17604677 -85890297 + Lx9 LINE L1 7521 7618 -26 1 719 465 384 80 44 chr15 17604738 17605149 -85889825 + MTE-int LTR MaLR 43 468 -1112 1 719 575 239 13 25 chr15 17607311 17607470 -85887504 - Lx9 LINE L1 -234 7410 7254 1 719 305 133 0 0 chr15 17607475 17607520 -85887454 + Lx9 LINE L1 7208 7252 -392 1 719 272 370 78 56 chr15 17608944 17609250 -85885724 - MLT2B2 LTR ERVL -150 365 53 1 719 4093 65 17 7 chr15 17609290 17609832 -85885142 + L1Md_F2 LINE L1 6024 6570 -12 1 719 423 0 0 0 chr15 17610010 17610057 -85884917 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 719 510 17 0 0 chr15 17610126 17610185 -85884789 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 719 261 0 0 0 chr15 17610185 17610213 -85884761 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 719 563 71 12 0 chr15 17611445 17611530 -85883444 + (CA)n Simple_repeat Simple_repeat 1 86 0 1 719 240 86 0 0 chr15 17611549 17611584 -85883390 + (T)n Simple_repeat Simple_repeat 1 35 0 1 719 512 128 0 0 chr15 17611584 17611662 -85883312 - B1_Mus2 SINE Alu 0 147 70 1 719 273 98 0 0 chr15 17612124 17612165 -85882809 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 1 719 36045 37 0 8 chr15 17612206 17617378 -85877596 + L1Md_T LINE L1 462 5586 -297 1 719 8272 37 1 0 chr15 17617378 17618403 -85876571 + L1Md_T LINE L1 5587 6582 0 1 719 740 191 6 43 chr15 17618431 17618595 -85876379 - Lx7 LINE L1 -333 7363 7206 1 719 238 271 41 0 chr15 17618605 17618707 -85876267 - L1_Mur2 LINE L1 -691 5433 5343 1 719 490 232 94 21 chr15 17619224 17619457 -85875517 - Lx9 LINE L1 0 7644 7395 1 719 305 0 0 0 chr15 17619537 17619572 -85875402 - U6 snRNA snRNA -72 35 1 1 719 2382 54 31 28 chr15 17621365 17621691 -85873283 + IAPLTR2b LTR ERVK 1 327 0 1 719 2172 52 0 0 chr15 17621695 17621966 -85873008 - RLTR10-int LTR ERVK -1415 572 302 1 719 2209 69 122 14 chr15 17621966 17622318 -85872656 - RLTR10 LTR ERVK 0 390 1 1 719 215 310 0 0 chr15 17622364 17622435 -85872539 + A-rich Low_complexity Low_complexity 1 71 0 1 719 23 0 0 0 chr15 17622454 17622477 -85872497 + AT_rich Low_complexity Low_complexity 1 23 0 1 719 388 148 11 22 chr15 17622686 17622776 -85872198 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 1 719 326 32 62 16 chr15 17622828 17622892 -85872082 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 1 719 222 91 0 0 chr15 17622898 17622931 -85872043 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 719 2328 204 58 8 chr15 17623337 17623822 -85871152 + RLTR20C LTR ERVK 1 509 -25 1 719 1905 190 25 35 chr15 17623919 17624323 -85870651 + Lx5 LINE L1 6418 6817 -233 1 719 1623 236 38 36 chr15 17624330 17624591 -85870383 + RLTR11A LTR ERVK 10 276 -252 1 719 908 109 47 90 chr15 17624591 17624803 -85870171 + Lx2 LINE L1 6795 6997 0 1 719 1623 236 38 36 chr15 17624803 17624989 -85869985 + RLTR11A LTR ERVK 277 458 -70 1 719 284 234 25 25 chr15 17625011 17625090 -85869884 + RLTR11A LTR ERVK 450 528 0 1 719 3068 162 41 14 chr15 17625788 17626352 -85868622 + Lx2 LINE L1 6418 6996 -1 1 719 3038 282 15 40 chr15 17626382 17627315 -85867659 + Lx7 LINE L1 6423 7332 -364 1 719 4177 57 29 0 chr15 17627334 17627860 -85867114 - L1Md_F2 LINE L1 -18 6564 6024 1 719 247 283 55 8 chr15 17627891 17628019 -85866955 + Lx7 LINE L1 7563 7696 0 1 719 420 55 0 0 chr15 17628293 17628348 -85866626 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 719 456 111 0 0 chr15 17628349 17628430 -85866544 + (GA)n Simple_repeat Simple_repeat 2 82 0 1 719 23 78 0 0 chr15 17628629 17628680 -85866294 + AT_rich Low_complexity Low_complexity 1 51 0 1 719 235 275 70 27 chr15 17630024 17630211 -85864763 + L1M5 LINE L1 5283 5477 -702 1 719 279 366 0 0 chr15 17630451 17630626 -85864348 + (TCCA)n Simple_repeat Simple_repeat 2 176 0 1 719 228 360 0 0 chr15 17631619 17631755 -85863219 + (TCCA)n Simple_repeat Simple_repeat 1 136 0 1 719 651 99 0 0 chr15 17632067 17632168 -85862806 + (CA)n Simple_repeat Simple_repeat 1 101 0 1 719 2284 60 3 3 chr15 17632593 17632892 -85862082 + L1_Mus1 LINE L1 6269 6567 0 1 719 28 29 0 0 chr15 17633078 17633113 -85861861 + AT_rich Low_complexity Low_complexity 1 35 0 1 719 428 297 25 25 chr15 17633297 17633418 -85861556 + ID_B1 SINE B4 89 209 -15 1 719 498 259 0 0 chr15 17633906 17634076 -85860898 + (TG)n Simple_repeat Simple_repeat 2 171 0 1 719 212 246 0 34 chr15 17634078 17634137 -85860837 + (TATG)n Simple_repeat Simple_repeat 3 59 0 1 719 409 347 77 20 chr15 17634139 17634386 -85860588 - B4A SINE B4 -4 288 28 1 719 639 60 0 0 chr15 17634538 17634622 -85860352 + (TG)n Simple_repeat Simple_repeat 2 85 0 2 719 225 398 30 20 chr15 17636533 17636633 -85858341 + B1_Mm SINE Alu 2 102 -45 2 719 3743 34 0 0 chr15 17636873 17637319 -85857655 + L1Md_T LINE L1 6137 6582 0 2 719 516 32 0 0 chr15 17637404 17637466 -85857508 + (CTA)n Simple_repeat Simple_repeat 1 62 0 2 719 2028 177 76 2 chr15 17637486 17637906 -85857068 + Lx2A1 LINE L1 6552 7002 -6 2 719 1210 108 6 11 chr15 17639889 17640067 -85854907 + B2_Mm2 SINE B2 1 177 -18 2 719 5061 226 34 32 chr15 17640235 17641526 -85853448 - Lx2B LINE L1 -13 6987 5694 2 719 663 227 15 29 chr15 17641527 17641663 -85853311 + B1_Mus1 SINE Alu 5 138 -10 2 719 456 91 0 0 chr15 17641684 17641750 -85853224 + (TAAG)n Simple_repeat Simple_repeat 2 67 0 2 719 2106 171 16 69 chr15 17641750 17642201 -85852773 - Lx2B LINE L1 -206 5671 5245 2 719 23 0 0 0 chr15 17643057 17643080 -85851894 + AT_rich Low_complexity Low_complexity 1 23 0 2 719 578 307 118 32 chr15 17643921 17644453 -85850521 + L1MC1 LINE L1 5434 6011 -322 2 719 31 82 0 0 chr15 17644643 17644716 -85850258 + AT_rich Low_complexity Low_complexity 1 73 0 2 719 243 135 104 0 chr15 17644808 17644904 -85850070 + (TA)n Simple_repeat Simple_repeat 2 107 0 2 719 797 310 43 97 chr15 17645264 17645686 -85849288 + MER57D LTR ERV1 13 411 0 2 719 222 214 0 0 chr15 17647201 17647257 -85847717 + T-rich Low_complexity Low_complexity 6 61 0 2 719 847 262 46 12 chr15 17647352 17647611 -85847363 - ORR1C2 LTR MaLR -15 369 102 2 719 734 236 39 74 chr15 17647628 17647987 -85846987 + RMER2 LTR ERV1 1 445 -122 2 719 231 215 0 97 chr15 17647965 17648037 -85846937 - ORR1C2 LTR MaLR -301 83 19 2 719 2972 292 78 26 chr15 17648040 17649096 -85845878 - ORR1C2-int LTR MaLR -2 1368 258 2 719 1483 127 0 4 chr15 17649097 17649327 -85845647 + Lx2 LINE L1 6496 6724 -273 2 719 23 0 0 0 chr15 17650138 17650161 -85844813 + AT_rich Low_complexity Low_complexity 1 23 0 2 719 33 25 0 0 chr15 17650268 17650308 -85844666 + AT_rich Low_complexity Low_complexity 1 40 0 2 719 395 331 97 23 chr15 17650462 17650604 -85844370 + ORR1C2 LTR MaLR 1 151 -223 2 719 603 0 0 0 chr15 17650604 17650671 -85844303 + (TTTC)n Simple_repeat Simple_repeat 4 70 0 2 719 395 339 110 21 chr15 17650671 17650740 -85844234 + ORR1C2 LTR MaLR 152 233 -145 2 719 300 300 0 11 chr15 17650752 17650843 -85844131 + ORR1C2 LTR MaLR 154 243 -131 2 719 226 184 0 0 chr15 17650861 17650899 -85844075 - Lx8 LINE L1 -509 6964 6927 2 719 554 211 107 20 chr15 17650899 17651049 -85843925 + ORR1C2 LTR MaLR 222 384 0 2 719 723 337 97 49 chr15 17651050 17651677 -85843297 - Lx8 LINE L1 -190 7283 6627 2 719 24 32 0 0 chr15 17652255 17652286 -85842688 + AT_rich Low_complexity Low_complexity 1 31 0 2 719 432 55 0 0 chr15 17652305 17652360 -85842614 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 719 27 49 0 0 chr15 17652757 17652798 -85842176 + AT_rich Low_complexity Low_complexity 1 41 0 2 719 505 166 35 0 chr15 17653048 17653193 -85841781 + (TAGA)n Simple_repeat Simple_repeat 1 150 0 2 719 1113 62 7 0 chr15 17654417 17654563 -85840411 + B1_Mm SINE Alu 1 147 0 2 719 232 27 26 26 chr15 17654576 17654614 -85840360 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 2 719 234 91 0 0 chr15 17654711 17654744 -85840230 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 719 1089 274 105 133 chr15 17654748 17655547 -85839427 + RLTR40 LTR ERVK 31 807 -10 2 719 721 276 37 41 chr15 17655688 17655930 -85839044 - ORR1D1 LTR MaLR 0 374 134 2 719 1520 92 9 0 chr15 17656138 17656355 -85838619 + L1_Mus2 LINE L1 6347 6565 -1 2 719 27 0 0 0 chr15 17656551 17656578 -85838396 + AT_rich Low_complexity Low_complexity 1 27 0 2 719 275 394 0 9 chr15 17656664 17656769 -85838205 - RSINE1 SINE B4 -25 140 37 2 719 305 261 11 0 chr15 17657433 17657521 -85837453 + (TATATG)n Simple_repeat Simple_repeat 1 89 0 2 719 209 30 0 57 chr15 17657530 17657565 -85837409 + (TATG)n Simple_repeat Simple_repeat 2 34 0 2 719 349 345 71 28 chr15 17657623 17657805 -85837169 + B3A SINE B2 8 197 -1 2 719 195 42 0 0 chr15 17657865 17657889 -85837085 + (A)n Simple_repeat Simple_repeat 1 24 0 2 719 940 234 46 4 chr15 17661084 17661324 -85833650 - Lx5 LINE L1 -302 6748 6499 2 719 2092 197 96 2 chr15 17661322 17661789 -85833185 + Lx5 LINE L1 5602 6112 -938 2 719 260 113 0 36 chr15 17662126 17662181 -85832793 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 2 719 293 259 24 12 chr15 17662436 17662518 -85832456 + MTE2b LTR MaLR 18 100 -279 2 719 1782 147 0 0 chr15 17662518 17662579 -85832395 + L1_Mm LINE L1 4674 4734 -1149 2 719 423 0 0 0 chr15 17662579 17662626 -85832348 + (CAA)n Simple_repeat Simple_repeat 2 48 0 2 719 1782 147 0 0 chr15 17662626 17662850 -85832124 + L1_Mm LINE L1 4735 4958 -925 2 719 1058 135 19 42 chr15 17662850 17663066 -85831908 + L1_Mus3 LINE L1 6428 6638 0 2 719 3112 168 29 0 chr15 17663160 17663677 -85831297 + L1VL4 LINE L1 214 745 -5557 2 719 768 129 86 0 chr15 17663694 17663834 -85831140 + MusHAL1 LINE L1 128 279 -2433 2 719 302 152 0 17 chr15 17664116 17664176 -85830798 + (TAG)n Simple_repeat Simple_repeat 1 59 0 2 719 234 302 31 10 chr15 17664183 17664280 -85830694 - Lx6 LINE L1 -42 7418 7320 2 719 277 339 86 83 chr15 17665322 17665670 -85829304 + MLT-int LTR MaLR 221 569 -1166 2 719 239 244 58 44 chr15 17665763 17665900 -85829074 + Lx9 LINE L1 7414 7552 -92 2 719 788 399 57 46 chr15 17666425 17666966 -85828008 + MLT-int LTR MaLR 1053 1599 -136 2 719 792 32 0 0 chr15 17667778 17667873 -85827101 + (TA)n Simple_repeat Simple_repeat 2 96 0 2 719 35047 69 2 2 chr15 17668133 17674263 -85820711 - L1Md_F2 LINE L1 0 6585 365 2 719 557 244 7 109 chr15 17674400 17674547 -85820427 - B1_Mus2 SINE Alu -15 132 1 2 719 275 87 43 0 chr15 17674547 17674593 -85820381 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 2 719 590 310 32 16 chr15 17674663 17674853 -85820121 + B3 SINE B2 24 216 0 2 719 396 0 0 0 chr15 17674933 17674977 -85819997 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 719 25 31 0 0 chr15 17675615 17675647 -85819327 + AT_rich Low_complexity Low_complexity 1 32 0 2 719 286 276 35 0 chr15 17675648 17675764 -85819210 - Lx9 LINE L1 -8 7636 7517 2 719 2959 207 115 2 chr15 17675798 17676929 -85818045 + Lx3C LINE L1 873 2145 -3741 2 719 23 33 0 0 chr15 17677293 17677323 -85817651 + AT_rich Low_complexity Low_complexity 1 30 0 2 719 1053 204 43 13 chr15 17677343 17677564 -85817410 + Lx3C LINE L1 2149 2379 -3507 2 719 269 51 0 25 chr15 17677564 17677604 -85817370 + (CAA)n Simple_repeat Simple_repeat 1 39 0 2 719 1053 204 43 13 chr15 17677604 17677615 -85817359 + Lx3C LINE L1 2380 2388 -3498 2 719 9211 193 68 18 chr15 17677618 17680146 -85814828 + Lx3C LINE L1 3653 6304 -672 2 719 38553 29 9 6 chr15 17680187 17686317 -85808657 - L1Md_A LINE L1 0 6582 442 2 719 2004 259 42 31 chr15 17686317 17686866 -85808108 - ORR1B1-int LTR MaLR -1408 555 1 2 719 1551 217 32 74 chr15 17686866 17687270 -85807704 - ORR1B1 LTR MaLR 0 394 8 2 719 807 48 33 27 chr15 17687951 17688101 -85806873 + (TTCTC)n Simple_repeat Simple_repeat 5 155 0 2 719 288 0 0 0 chr15 17688609 17688641 -85806333 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 719 201 139 0 0 chr15 17688650 17688693 -85806281 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 719 278 319 113 40 chr15 17688720 17688844 -85806130 - B3A SINE B2 -63 135 3 2 719 1522 211 169 3 chr15 17688917 17689301 -85805673 + Lx3C LINE L1 6328 6775 -283 2 719 1397 273 20 7 chr15 17689304 17689710 -85805264 - Lx5 LINE L1 -739 6311 5901 2 719 814 258 27 12 chr15 17690199 17690528 -85804446 - ORR1D1 LTR MaLR 0 374 9 2 719 405 0 0 0 chr15 17691871 17691916 -85803058 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 719 1112 62 7 14 chr15 17692291 17692437 -85802537 + B1_Mus1 SINE Alu 3 147 -1 2 719 206 125 0 20 chr15 17692437 17692486 -85802488 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 2 719 268 312 11 0 chr15 17692787 17692880 -85802094 + PB1D7 SINE Alu 27 120 0 2 719 285 330 0 72 chr15 17693309 17693420 -85801554 + PB1D9 SINE Alu 2 104 -16 2 719 225 0 0 0 chr15 17693421 17693446 -85801528 + (TA)n Simple_repeat Simple_repeat 1 25 0 2 719 22 0 0 0 chr15 17693748 17693770 -85801204 + AT_rich Low_complexity Low_complexity 1 22 0 2 719 22 0 0 0 chr15 17694099 17694121 -85800853 + AT_rich Low_complexity Low_complexity 1 22 0 2 89 779 366 52 68 chr15 17694364 17695252 -85799722 - Lx8 LINE L1 -244 7229 6356 2 720 282 252 188 35 chr15 17696056 17696200 -85798774 - RLTR6-int LTR ERV1 0 7778 7613 2 720 4005 132 35 11 chr15 17696189 17696855 -85798119 - MMVL30-int LTR ERV1 -96 3602 2921 2 720 238 302 16 0 chr15 17697276 17697339 -85797635 + MIRb SINE MIR 178 241 -27 2 720 5511 98 28 94 chr15 17697460 17698430 -85796544 - Lx3_Mus LINE L1 0 7009 6104 2 720 657 277 24 19 chr15 17698430 17698640 -85796334 - Lx7 LINE L1 -369 7327 7117 2 720 489 187 65 0 chr15 17698647 17698754 -85796220 + Lx3_Mus LINE L1 6001 6114 -895 2 720 357 24 0 0 chr15 17699883 17699925 -85795049 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 720 793 172 7 15 chr15 17701724 17701860 -85793114 - RLTR25A LTR ERVK 0 1103 969 2 720 648 26 0 0 chr15 17701862 17701940 -85793034 + (TC)n Simple_repeat Simple_repeat 2 79 0 2 720 509 55 14 0 chr15 17701940 17702012 -85792962 + (TG)n Simple_repeat Simple_repeat 1 74 0 2 720 555 287 83 60 chr15 17702063 17702363 -85792611 - L1M2 LINE L1 -1144 5701 5395 2 720 1122 258 32 7 chr15 17702537 17702963 -85792011 + Lx3C LINE L1 6524 7050 -8 2 720 855 104 0 23 chr15 17703554 17703682 -85791292 + B1_Mus1 SINE Alu 24 148 0 2 720 3450 182 139 17 chr15 17703695 17704478 -85790496 + MTB_Mm-int LTR MaLR 380 1258 0 2 720 1365 190 26 145 chr15 17704478 17704940 -85790034 + MTB_Mm LTR MaLR 1 407 0 2 720 220 83 0 40 chr15 17705095 17705145 -85789829 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 2 720 249 371 43 0 chr15 17705999 17706185 -85788789 - L1M2 LINE L1 -4540 2309 2116 2 720 21 0 0 0 chr15 17708626 17708647 -85786327 + AT_rich Low_complexity Low_complexity 1 21 0 2 720 234 62 0 0 chr15 17709530 17709562 -85785412 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 720 252 170 0 0 chr15 17709562 17709615 -85785359 + GA-rich Low_complexity Low_complexity 2 54 0 2 720 314 54 0 0 chr15 17710109 17710146 -85784828 - L1Md_F3 LINE L1 -961 5623 5587 2 720 735 58 0 91 chr15 17710146 17710278 -85784696 + L1Md_F2 LINE L1 6463 6582 0 3 720 216 0 0 0 chr15 17710687 17710711 -85784263 + (T)n Simple_repeat Simple_repeat 1 24 0 3 720 249 184 43 9 chr15 17711391 17711506 -85783468 + (TA)n Simple_repeat Simple_repeat 2 120 0 3 720 21 0 0 0 chr15 17711578 17711599 -85783375 + AT_rich Low_complexity Low_complexity 1 21 0 3 720 557 391 26 26 chr15 17711660 17711925 -85783049 + B4A SINE B4 22 286 -6 3 720 307 331 6 13 chr15 17712138 17712297 -85782677 + (TATATG)n Simple_repeat Simple_repeat 6 163 0 3 720 22 0 0 0 chr15 17712403 17712425 -85782549 + AT_rich Low_complexity Low_complexity 1 22 0 3 720 433 154 9 9 chr15 17712480 17712585 -85782389 - L1_Mus4 LINE L1 -7 6629 6525 3 720 241 256 12 0 chr15 17712899 17712985 -85781989 - L1M5 LINE L1 -1575 4571 4485 3 720 316 329 126 9 chr15 17713467 17713697 -85781277 - L1MD LINE L1 -2208 3938 3682 3 720 25 65 0 0 chr15 17714079 17714125 -85780849 + AT_rich Low_complexity Low_complexity 1 46 0 3 720 25 31 0 0 chr15 17714620 17714652 -85780322 + AT_rich Low_complexity Low_complexity 1 32 0 3 720 7021 101 3 7 chr15 17714999 17716019 -85778955 + Lx3_Mus LINE L1 5983 6998 -11 3 720 32 43 0 0 chr15 17716019 17716065 -85778909 + AT_rich Low_complexity Low_complexity 1 46 0 3 720 393 95 0 0 chr15 17716916 17716979 -85777995 + (TC)n Simple_repeat Simple_repeat 2 64 0 3 720 432 0 0 0 chr15 17716979 17717027 -85777947 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 720 414 0 0 0 chr15 17717696 17717742 -85777232 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 720 28 29 0 0 chr15 17717758 17717793 -85777181 + AT_rich Low_complexity Low_complexity 1 35 0 3 720 257 180 45 0 chr15 17718412 17718501 -85776473 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 3 720 198 0 0 0 chr15 17718585 17718607 -85776367 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 3 720 4685 212 61 39 chr15 17718607 17720393 -85774581 + Lx4B LINE L1 4634 6472 -586 3 720 2066 128 10 16 chr15 17720393 17720704 -85774270 + RLTR27 LTR ERVK 1 309 0 3 720 4124 252 62 45 chr15 17720704 17721214 -85773760 + Lx4B LINE L1 6449 7045 -5 3 720 21 57 0 0 chr15 17721219 17721254 -85773720 + AT_rich Low_complexity Low_complexity 1 35 0 3 720 297 51 0 0 chr15 17721462 17721501 -85773473 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 720 23 33 0 0 chr15 17721598 17721628 -85773346 + AT_rich Low_complexity Low_complexity 1 30 0 3 720 633 293 12 0 chr15 17721932 17722096 -85772878 - MTE2a LTR MaLR -1 378 213 3 720 606 329 73 78 chr15 17722137 17722372 -85772602 + L1M2 LINE L1 4462 4697 -1446 3 720 2768 165 10 4 chr15 17722372 17722865 -85772109 + Lx2 LINE L1 6502 6997 0 3 720 606 329 73 78 chr15 17722865 17723358 -85771616 + L1M2 LINE L1 4698 5186 -957 3 720 26 98 0 0 chr15 17723391 17723473 -85771501 + AT_rich Low_complexity Low_complexity 1 82 0 3 720 30 45 0 0 chr15 17724642 17724686 -85770288 + AT_rich Low_complexity Low_complexity 1 44 0 3 720 1020 94 0 0 chr15 17724746 17724980 -85769994 + (TG)n Simple_repeat Simple_repeat 1 234 0 3 720 551 357 66 19 chr15 17724985 17725256 -85769718 - B4A SINE B4 -6 286 3 3 720 289 274 48 0 chr15 17726347 17726431 -85768543 + L1MB5 LINE L1 3462 3549 -2591 3 720 852 191 0 0 chr15 17726577 17726755 -85768219 + GA-rich Low_complexity Low_complexity 1 178 0 3 720 21 0 0 0 chr15 17726956 17726977 -85767997 + AT_rich Low_complexity Low_complexity 1 21 0 3 720 232 296 18 42 chr15 17727005 17727171 -85767803 + L1MB5 LINE L1 4992 5153 -993 3 720 434 320 21 1 chr15 17727389 17727576 -85767398 - MER2 DNA MER2_type -31 305 126 3 720 471 390 52 34 chr15 17727687 17727899 -85767075 + B4 SINE B4 1 211 -81 3 720 225 0 0 0 chr15 17727899 17727924 -85767050 + (CAAT)n Simple_repeat Simple_repeat 3 27 0 3 720 471 390 52 34 chr15 17727924 17727979 -85766995 + B4 SINE B4 212 273 -19 3 720 431 356 94 45 chr15 17728033 17728526 -85766448 + L1MB5 LINE L1 5312 5828 -346 3 720 712 309 29 0 chr15 17728530 17728734 -85766240 + B3 SINE B2 6 215 -1 3 720 25 0 0 0 chr15 17729047 17729072 -85765902 + AT_rich Low_complexity Low_complexity 1 25 0 3 720 25 31 0 0 chr15 17729103 17729135 -85765839 + AT_rich Low_complexity Low_complexity 1 32 0 3 720 903 262 15 0 chr15 17730521 17730780 -85764194 + Lx9 LINE L1 7240 7502 -142 3 720 22 0 0 0 chr15 17731757 17731779 -85763195 + AT_rich Low_complexity Low_complexity 1 22 0 3 720 43 76 0 0 chr15 17732336 17732428 -85762546 + AT_rich Low_complexity Low_complexity 1 92 0 3 720 375 362 22 41 chr15 17733011 17733279 -85761695 + MLT1F2 LTR MaLR 286 548 -12 3 720 6675 117 26 3 chr15 17734286 17735319 -85759655 + Lx2 LINE L1 5587 6643 -354 3 720 1464 130 0 0 chr15 17735319 17735542 -85759432 + Lx2 LINE L1 6775 6997 0 3 720 21 0 0 0 chr15 17735669 17735690 -85759284 + AT_rich Low_complexity Low_complexity 1 21 0 3 720 485 322 28 60 chr15 17736981 17737163 -85757811 - B3A SINE B2 -28 188 13 3 720 294 29 0 0 chr15 17737863 17737898 -85757076 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 720 387 192 0 0 chr15 17738364 17738442 -85756532 + (TATG)n Simple_repeat Simple_repeat 2 79 0 3 720 494 111 86 0 chr15 17738959 17739040 -85755934 - L1Md_F2 LINE L1 -314 6683 6596 3 720 26 82 0 0 chr15 17739477 17739538 -85755436 + AT_rich Low_complexity Low_complexity 1 61 0 3 720 790 73 0 0 chr15 17740484 17740593 -85754381 - L1_Mus1 LINE L1 -553 6014 5906 3 720 3695 94 2 6 chr15 17740596 17741111 -85753863 + L1_Mus1 LINE L1 6049 6561 -6 3 720 201 171 0 0 chr15 17741134 17741169 -85753805 + T-rich Low_complexity Low_complexity 1 35 0 3 720 12004 59 26 2 chr15 17741174 17743457 -85751517 - L1Md_F2 LINE L1 -14 6568 4226 3 720 2659 91 0 0 chr15 17743457 17743831 -85751143 + L1_Mm LINE L1 2013 2386 -3497 3 720 28911 105 3 14 chr15 17743950 17749127 -85745847 + L1VL1 LINE L1 409 5531 -352 3 720 912 199 29 6 chr15 17749136 17749308 -85745666 + RMER19B LTR ERVK 357 532 -370 3 720 2654 81 0 0 chr15 17749312 17749644 -85745330 + IAPEY3_LTR LTR ERVK 1 332 0 3 720 43619 74 11 8 chr15 17749644 17755361 -85739613 + IAPEY3-int LTR ERVK 1 5732 -1948 3 720 2168 39 0 0 chr15 17755351 17755605 -85739369 - IAPEY3-int LTR ERVK -2364 5316 5063 3 720 9338 95 42 4 chr15 17755603 17757453 -85737521 + IAPEY3-int LTR ERVK 5735 7680 0 3 720 2625 75 0 0 chr15 17757453 17757785 -85737189 + IAPEY3_LTR LTR ERVK 1 332 0 3 720 969 268 9 82 chr15 17757789 17758106 -85736868 + RMER19C LTR ERVK 318 611 0 3 720 608 328 75 38 chr15 17758190 17758614 -85736360 - Lx8 LINE L1 -129 7344 6905 3 720 34 42 0 0 chr15 17758808 17758856 -85736118 + AT_rich Low_complexity Low_complexity 1 48 0 3 720 23 33 0 0 chr15 17759132 17759162 -85735812 + AT_rich Low_complexity Low_complexity 1 30 0 3 720 1744 178 81 30 chr15 17759301 17759694 -85735280 + MTC LTR MaLR 1 413 -8 3 720 1909 351 41 24 chr15 17759684 17760634 -85734340 - MTE-int LTR MaLR -20 1560 595 3 720 426 184 204 20 chr15 17760750 17760915 -85734059 - MT2A LTR ERVL -2 599 394 3 720 668 207 44 77 chr15 17760941 17761124 -85733850 - URR1A DNA MER1_type -6 220 44 3 720 339 322 17 17 chr15 17761209 17761329 -85733645 - MT2A LTR ERVL -323 210 91 3 720 276 376 40 57 chr15 17761332 17761580 -85733394 - MTE-int LTR MaLR -1047 533 290 3 720 261 0 0 0 chr15 17761580 17761609 -85733365 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 720 229 386 124 10 chr15 17761813 17762022 -85732952 - MTE2b LTR MaLR -19 360 128 3 720 1215 87 0 6 chr15 17762048 17762221 -85732753 + L1_Mus2 LINE L1 6394 6565 -1 3 720 216 0 0 0 chr15 17762247 17762271 -85732703 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 3 720 207 0 0 0 chr15 17762413 17762436 -85732538 + (T)n Simple_repeat Simple_repeat 1 23 0 3 720 25 0 0 0 chr15 17762498 17762523 -85732451 + AT_rich Low_complexity Low_complexity 1 25 0 3 720 1364 75 0 31 chr15 17763247 17763441 -85731533 + B2_Mm2 SINE B2 3 190 -5 3 720 270 0 0 0 chr15 17763800 17763830 -85731144 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 3 720 1332 177 12 4 chr15 17764507 17764762 -85730212 + Lx2 LINE L1 6741 6997 0 3 720 991 80 0 0 chr15 17764777 17764902 -85730072 - L1Md_F2 LINE L1 -373 6209 6085 3 720 3094 60 2 2 chr15 17764905 17765308 -85729666 + L1Md_F2 LINE L1 6177 6579 -3 3 720 416 35 17 0 chr15 17765345 17765403 -85729571 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 3 720 39 80 0 0 chr15 17766350 17766438 -85728536 + AT_rich Low_complexity Low_complexity 1 88 0 3 720 219 69 0 0 chr15 17766533 17766562 -85728412 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 720 24 32 0 0 chr15 17766673 17766704 -85728270 + AT_rich Low_complexity Low_complexity 1 31 0 3 720 23 0 0 0 chr15 17767441 17767464 -85727510 + AT_rich Low_complexity Low_complexity 1 23 0 3 720 380 67 0 16 chr15 17767894 17767955 -85727019 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 720 324 310 68 115 chr15 17767992 17768287 -85726687 - MT2A LTR ERVL -184 349 69 3 720 701 321 24 20 chr15 17768340 17768636 -85726338 - Lx8 LINE L1 -218 7255 6959 3 720 462 49 0 0 chr15 17768641 17768702 -85726272 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 720 228 67 0 0 chr15 17768706 17768736 -85726238 + (TA)n Simple_repeat Simple_repeat 1 30 0 3 720 237 222 37 0 chr15 17768750 17768831 -85726143 + (TA)n Simple_repeat Simple_repeat 1 84 0 3 720 1304 97 11 5 chr15 17768970 17769156 -85725818 - B2_Mm2 SINE B2 -8 187 1 3 720 1189 338 40 36 chr15 17769179 17769754 -85725220 + Lx8 LINE L1 6338 6914 -559 3 720 342 314 54 64 chr15 17770722 17770926 -85724048 + L1MCa LINE L1 758 959 -5549 3 720 563 333 98 4 chr15 17770933 17771177 -85723797 + Lx8 LINE L1 7059 7325 -148 3 720 262 88 0 0 chr15 17771179 17771213 -85723761 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 720 510 61 0 0 chr15 17771214 17771280 -85723694 + (TA)n Simple_repeat Simple_repeat 2 67 0 3 720 306 229 54 85 chr15 17771305 17771434 -85723540 + L1MCa LINE L1 1890 2014 -4494 3 720 2379 209 64 62 chr15 17771449 17772123 -85722851 - RMER6C LTR ERVK -15 675 1 3 720 30 45 0 0 chr15 17773181 17773225 -85721749 + AT_rich Low_complexity Low_complexity 1 44 0 3 720 669 86 0 0 chr15 17774051 17774144 -85720830 + (GGAA)n Simple_repeat Simple_repeat 3 95 0 3 720 620 275 223 21 chr15 17774186 17774509 -85720465 + Lx9 LINE L1 7040 7427 -217 3 720 417 86 0 0 chr15 17774517 17774575 -85720399 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 3 720 1291 262 31 16 chr15 17774576 17774898 -85720076 - Lx5 LINE L1 -20 7030 6704 3 720 5349 182 31 16 chr15 17774917 17776048 -85718926 + Lx5 LINE L1 4586 5794 -92 3 720 1258 198 48 60 chr15 17776048 17776381 -85718593 + ORR1A4 LTR MaLR 1 329 0 4 720 5349 184 26 32 chr15 17776381 17776897 -85718077 + Lx5 LINE L1 5786 6295 -755 3 720 21 0 0 0 chr15 17777340 17777361 -85717613 + AT_rich Low_complexity Low_complexity 1 21 0 4 720 4606 161 18 8 chr15 17778600 17779419 -85715555 + Lx2 LINE L1 6168 6994 -3 4 720 477 0 0 0 chr15 17779617 17779670 -85715304 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 4 720 2792 100 140 7 chr15 17779670 17780331 -85714643 - L1_Mus3 LINE L1 -428 6210 5473 4 720 330 26 0 0 chr15 17780331 17780370 -85714604 + (TTATA)n Simple_repeat Simple_repeat 1 39 0 4 720 2792 153 36 35 chr15 17780370 17780488 -85714486 - L1_Mus3 LINE L1 -411 5472 5361 4 720 23 0 0 0 chr15 17781139 17781162 -85713812 + AT_rich Low_complexity Low_complexity 1 23 0 4 720 277 163 167 37 chr15 17781748 17781856 -85713118 - Lx6 LINE L1 -28 7432 7311 4 720 3024 80 2 2 chr15 17782106 17782506 -85712468 + MTB LTR MaLR 1 400 0 4 720 399 157 0 0 chr15 17782561 17782631 -85712343 + C-rich Low_complexity Low_complexity 2 71 0 4 720 510 31 0 0 chr15 17782638 17782702 -85712272 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 720 1199 174 236 0 chr15 17782859 17783134 -85711840 + Lx3C LINE L1 6616 6955 -21 4 720 27 29 0 0 chr15 17783912 17783946 -85711028 + AT_rich Low_complexity Low_complexity 1 34 0 4 720 210 274 12 23 chr15 17784653 17784739 -85710235 + (TATATG)n Simple_repeat Simple_repeat 6 90 0 4 720 2798 207 50 8 chr15 17784758 17785392 -85709582 - Lx4B LINE L1 0 7058 6398 4 720 1917 165 3 57 chr15 17787066 17787432 -85707542 + ORR1A1 LTR MaLR 1 346 0 4 720 929 146 84 6 chr15 17787642 17787821 -85707153 + B2_Mm2 SINE B2 1 193 -2 4 720 26 88 0 0 chr15 17788118 17788186 -85706788 + AT_rich Low_complexity Low_complexity 1 68 0 4 720 471 63 0 0 chr15 17788551 17788614 -85706360 + (TA)n Simple_repeat Simple_repeat 1 63 0 4 720 351 89 0 0 chr15 17789533 17789589 -85705385 + (CAAAA)n Simple_repeat Simple_repeat 5 60 0 4 720 486 241 49 70 chr15 17789632 17789775 -85705199 - B1_Mur1 SINE Alu -1 148 9 4 720 2170 273 95 12 chr15 17791148 17792109 -85702865 + L1_Mur3 LINE L1 4326 5399 -898 4 720 513 364 55 14 chr15 17792136 17792484 -85702490 + Lx8 LINE L1 6595 6956 -517 4 720 1117 257 31 59 chr15 17792854 17793210 -85701764 - Lx4B LINE L1 -17 7041 6696 4 720 3679 157 60 23 chr15 17793187 17793812 -85701162 + L1_Mur2 LINE L1 3789 4429 -1448 4 720 1534 52 0 0 chr15 17793812 17794004 -85700970 + L1Md_T LINE L1 6390 6581 -1 4 720 3679 157 60 23 chr15 17794004 17794165 -85700809 + L1_Mur2 LINE L1 4430 4603 -1274 4 720 755 173 165 70 chr15 17794153 17794383 -85700591 + L1_Mur2 LINE L1 4850 5101 -776 4 720 5041 71 0 8 chr15 17795667 17796331 -85698643 - L1Md_F2 LINE L1 -12 6570 5912 4 720 6590 66 0 1 chr15 17796331 17797180 -85697794 + L1Md_F2 LINE L1 4987 5834 -49 4 720 367 60 0 107 chr15 17797487 17797507 -85697467 - Lx3A LINE L1 0 6981 6969 4 720 288 0 0 0 chr15 17797507 17797539 -85697435 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 4 720 367 60 0 107 chr15 17797539 17797593 -85697381 - Lx3A LINE L1 -13 6968 6915 4 720 296 64 21 0 chr15 17797629 17797676 -85697298 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 4 720 459 0 0 0 chr15 17798064 17798115 -85696859 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 720 489 225 88 34 chr15 17798169 17798316 -85696658 - MTC LTR MaLR -72 347 193 4 720 787 249 29 15 chr15 17798337 17798541 -85696433 - Lx5 LINE L1 -3 7047 6841 4 720 2251 194 101 11 chr15 17798536 17799063 -85695911 - Lx5 LINE L1 -884 6166 5593 4 720 3121 60 2 10 chr15 17799063 17799466 -85695508 - MTB LTR MaLR 0 400 1 4 720 1678 178 39 18 chr15 17799466 17799517 -85695457 - Lx5 LINE L1 -291 5586 5540 4 720 542 241 62 67 chr15 17799513 17799722 -85695252 + MusHAL1 LINE L1 1825 2032 -680 4 720 602 306 62 48 chr15 17799726 17800062 -85694912 + RLTR15 LTR ERVK 5 345 -14 4 720 4081 182 77 28 chr15 17800066 17801066 -85693908 + L1_Mur2 LINE L1 3220 4268 -1609 4 720 5796 186 31 19 chr15 17801070 17801983 -85692991 - L1_Mur2 LINE L1 -2880 2997 2081 4 720 279 0 0 0 chr15 17801983 17802014 -85692960 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 4 720 5796 186 31 19 chr15 17802014 17802033 -85692941 - L1_Mur2 LINE L1 -3797 2080 2057 4 720 458 17 0 17 chr15 17802033 17802093 -85692881 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 720 5796 186 31 19 chr15 17802093 17802464 -85692510 - L1_Mur2 LINE L1 -3821 2056 1680 4 720 694 235 117 0 chr15 17802742 17802921 -85692053 - MTC LTR MaLR -221 200 1 4 720 3361 250 111 10 chr15 17802921 17804063 -85690911 - MTC-int LTR MaLR 0 1258 1 4 720 1377 207 103 28 chr15 17804063 17804451 -85690523 - MTC LTR MaLR 0 421 5 4 720 957 303 56 6 chr15 17804477 17804835 -85690139 + Lx8 LINE L1 6473 6848 -625 4 720 986 198 94 0 chr15 17804894 17805106 -85689868 - RMER6D LTR ERVK -488 232 1 4 720 4244 12 2 6 chr15 17806018 17806507 -85688467 - L1Md_A LINE L1 0 6582 6096 4 720 239 271 0 28 chr15 17807286 17807358 -85687616 + (TATG)n Simple_repeat Simple_repeat 3 72 0 4 720 30 59 0 0 chr15 17807463 17807514 -85687460 + AT_rich Low_complexity Low_complexity 1 51 0 4 720 30 89 0 0 chr15 17807623 17807702 -85687272 + AT_rich Low_complexity Low_complexity 1 79 0 4 720 2612 192 19 15 chr15 17807962 17808480 -85686494 + Lx4A LINE L1 6536 7055 -3 4 720 904 344 61 20 chr15 17809786 17810340 -85684634 + L1M4c LINE L1 12 588 -5796 4 720 288 0 0 0 chr15 17810528 17810560 -85684414 + (A)n Simple_repeat Simple_repeat 1 32 0 4 720 709 209 6 38 chr15 17810689 17810848 -85684126 + RLTR40 LTR ERVK 34 187 -630 4 720 19361 100 5 4 chr15 17810849 17813957 -85681017 - L1Md_F2 LINE L1 -393 6189 3079 4 720 2550 91 106 5 chr15 17813957 17814353 -85680621 + L1_Mus1 LINE L1 6131 6566 -1 4 720 2017 243 80 38 chr15 17814380 17814980 -85679994 + RLTR40 LTR ERVK 179 803 -14 4 720 1801 162 119 14 chr15 17815391 17815761 -85679213 - RLTR9E LTR ERVK 0 409 1 4 720 25 31 0 0 chr15 17816008 17816040 -85678934 + AT_rich Low_complexity Low_complexity 1 32 0 4 720 377 284 89 25 chr15 17816453 17816655 -85678319 - L1M4 LINE L1 -3726 2420 2206 4 720 2925 60 10 0 chr15 17816716 17817100 -85677874 + MTA_Mm LTR MaLR 1 388 -8 4 720 188 67 33 0 chr15 17817158 17817188 -85677786 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 4 720 234 62 0 0 chr15 17817197 17817229 -85677745 + (TCTCTG)n Simple_repeat Simple_repeat 2 33 0 4 720 21 36 0 0 chr15 17817539 17817567 -85677407 + AT_rich Low_complexity Low_complexity 1 28 0 4 720 4614 59 0 2 chr15 17817723 17818470 -85676504 - L1Md_F2 LINE L1 -413 6169 5424 4 720 3068 82 37 5 chr15 17818470 17818898 -85676076 + L1Md_F2 LINE L1 6129 6570 -12 4 720 450 333 57 14 chr15 17819864 17820004 -85674970 - B4A SINE B4 -145 147 2 4 720 579 316 58 0 chr15 17821240 17821414 -85673560 + B3 SINE B2 28 211 -5 4 720 492 48 0 0 chr15 17821936 17821999 -85672975 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 720 352 280 5 5 chr15 17823435 17823660 -85671314 + (CATATA)n Simple_repeat Simple_repeat 1 225 0 4 720 2302 139 14 0 chr15 17823889 17824248 -85670726 - Lx LINE L1 -8 6646 6283 4 720 536 134 0 0 chr15 17824343 17824425 -85670549 - L1_Mus4 LINE L1 -356 6280 6199 4 720 213 153 27 14 chr15 17824869 17824942 -85670032 + (TA)n Simple_repeat Simple_repeat 2 75 0 4 721 7995 41 18 6 chr15 17826076 17827184 -85667790 - L1Md_F2 LINE L1 0 6582 5464 4 721 26 30 0 0 chr15 17827622 17827655 -85667319 + AT_rich Low_complexity Low_complexity 1 33 0 4 721 2705 98 28 0 chr15 17827658 17828046 -85666928 - L1_Mus2 LINE L1 -1 6565 6167 4 721 739 62 0 0 chr15 17828055 17828151 -85666823 + L1_Mus2 LINE L1 6084 6179 -388 4 721 392 130 0 13 chr15 17828151 17828229 -85666745 - Lx2A LINE L1 -1 7007 6931 4 721 212 56 0 77 chr15 17828288 17828327 -85666647 + (TAAAA)n Simple_repeat Simple_repeat 1 36 0 4 721 24 0 0 0 chr15 17828478 17828502 -85666472 + AT_rich Low_complexity Low_complexity 1 24 0 4 721 474 304 58 0 chr15 17828701 17828839 -85666135 + B1_Mur1 SINE Alu 1 146 -3 4 721 573 184 0 0 chr15 17828877 17828991 -85665983 + (TAGA)n Simple_repeat Simple_repeat 3 116 0 4 721 21 0 0 0 chr15 17829018 17829039 -85665935 + AT_rich Low_complexity Low_complexity 1 21 0 4 721 24 96 0 0 chr15 17829798 17829871 -85665103 + AT_rich Low_complexity Low_complexity 1 73 0 4 721 362 357 53 12 chr15 17830073 17830243 -85664731 - B3 SINE B2 -13 203 27 4 721 279 355 42 35 chr15 17830646 17830789 -85664185 - RSINE1 SINE B4 -9 156 13 4 721 206 232 18 0 chr15 17831249 17831305 -85663669 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 721 2040 104 36 42 chr15 17831634 17831966 -85663008 + Lx LINE L1 6325 6654 0 4 721 4840 116 16 3 chr15 17832115 17832882 -85662092 - L1_Mm LINE L1 -2331 3552 2776 4 721 32450 72 1 4 chr15 17832881 17838147 -85656827 + L1Md_F2 LINE L1 242 5589 -297 4 721 7757 57 7 2 chr15 17838147 17839127 -85655847 + L1Md_F2 LINE L1 5590 6574 -11 4 721 3395 117 0 39 chr15 17839127 17839686 -85655288 - MusHAL1 LINE L1 -1128 1584 1048 4 721 1939 284 79 8 chr15 17839692 17840288 -85654686 - Lx6 LINE L1 -65 7395 6758 4 721 3488 193 107 48 chr15 17840282 17841382 -85653592 - L1_Mur1 LINE L1 -691 5195 4050 4 721 450 211 37 0 chr15 17841365 17841474 -85653500 - L1_Mur3 LINE L1 -1776 4104 3992 4 721 278 315 21 21 chr15 17841474 17841568 -85653406 - B4 SINE B4 -196 96 3 4 721 1252 160 22 48 chr15 17841681 17841950 -85653024 + RMER6A LTR ERVK 345 606 -150 4 721 2742 175 4 13 chr15 17841950 17842424 -85652550 + L1VL4 LINE L1 205 674 -5628 4 721 6144 150 25 9 chr15 17842432 17843452 -85651522 + Lx2 LINE L1 5598 6634 -363 4 721 1230 143 14 9 chr15 17843453 17843672 -85651302 + Lx2 LINE L1 6766 6985 -12 4 721 1765 120 12 11 chr15 17844146 17844453 -85650521 + Lx LINE L1 6292 6573 -81 4 721 482 324 92 46 chr15 17844562 17844908 -85650066 - L1M5 LINE L1 -2787 3359 2998 4 721 620 302 150 15 chr15 17844994 17845104 -85649870 - Lx9 LINE L1 -23 7621 7473 4 721 306 0 0 0 chr15 17845104 17845138 -85649836 + (TC)n Simple_repeat Simple_repeat 2 35 0 4 721 252 0 0 0 chr15 17845138 17845165 -85649809 + (TA)n Simple_repeat Simple_repeat 1 28 0 4 721 620 302 150 15 chr15 17845165 17845392 -85649582 - Lx9 LINE L1 -172 7472 7238 4 721 1698 84 17 0 chr15 17845398 17845636 -85649338 - L1_Mus1 LINE L1 0 6567 6326 4 721 337 323 62 59 chr15 17845644 17845917 -85649057 + B4A SINE B4 1 274 -18 4 721 348 77 0 0 chr15 17845948 17846000 -85648974 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 721 368 278 0 36 chr15 17846019 17846083 -85648891 + (CATA)n Simple_repeat Simple_repeat 2 63 0 4 721 1766 120 115 10 chr15 17846083 17846378 -85648596 + ORR1A2 LTR MaLR 1 326 -1 5 721 368 278 0 36 chr15 17846378 17846451 -85648523 + (CATA)n Simple_repeat Simple_repeat 4 74 0 5 721 391 359 91 21 chr15 17846512 17846885 -85648089 - L1M5 LINE L1 -3301 2845 2447 4 721 590 92 50 8 chr15 17846901 17847022 -85647952 - L1_Mus3 LINE L1 -2 6636 6511 5 721 240 307 53 0 chr15 17847626 17847701 -85647273 + MTE2a LTR MaLR 1 79 -300 5 721 413 340 29 64 chr15 17847677 17847881 -85647093 + MTE2a LTR MaLR 29 225 -154 5 721 2844 181 18 12 chr15 17847881 17848556 -85646418 - Lx5 LINE L1 -1060 5990 5308 5 721 35152 53 2 3 chr15 17848561 17854219 -85640755 + L1Md_T LINE L1 1 5589 -297 5 721 8606 25 0 0 chr15 17854219 17855215 -85639759 + L1Md_T LINE L1 5590 6585 0 5 721 1573 170 55 0 chr15 17855224 17855553 -85639421 - Lx5 LINE L1 -566 5311 4965 5 721 817 92 8 0 chr15 17855557 17855677 -85639297 + B1_Mus1 SINE Alu 24 144 -4 5 721 552 42 0 0 chr15 17855678 17855749 -85639225 + (TAAA)n Simple_repeat Simple_repeat 1 71 0 5 721 252 0 0 0 chr15 17855939 17855967 -85639007 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 5 721 1027 90 0 0 chr15 17855967 17856100 -85638874 - B1_Mus2 SINE Alu -13 134 2 5 721 387 0 0 0 chr15 17857256 17857299 -85637675 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 721 210 381 0 0 chr15 17858698 17858761 -85636213 + B4A SINE B4 80 142 -150 5 721 440 329 0 41 chr15 17858713 17858859 -85636115 + B1F2 SINE Alu 10 149 0 5 721 37 39 0 0 chr15 17858871 17858922 -85636052 + AT_rich Low_complexity Low_complexity 1 51 0 5 721 348 127 0 0 chr15 17859207 17859262 -85635712 + (CATATA)n Simple_repeat Simple_repeat 4 58 0 5 721 21 0 0 0 chr15 17859861 17859882 -85635092 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 30 27 0 0 chr15 17859940 17859977 -85634997 + AT_rich Low_complexity Low_complexity 1 37 0 5 721 22 70 0 0 chr15 17860035 17860078 -85634896 + AT_rich Low_complexity Low_complexity 1 43 0 5 721 29 28 0 0 chr15 17861006 17861042 -85633932 + AT_rich Low_complexity Low_complexity 1 36 0 5 721 23 0 0 0 chr15 17861568 17861591 -85633383 + AT_rich Low_complexity Low_complexity 1 23 0 5 721 21 0 0 0 chr15 17861610 17861631 -85633343 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 28 48 0 0 chr15 17861718 17861760 -85633214 + AT_rich Low_complexity Low_complexity 1 42 0 5 721 199 287 16 48 chr15 17862083 17862194 -85632780 + MIRb SINE MIR 125 232 -30 5 721 187 130 18 18 chr15 17862758 17862813 -85632161 + (TCTA)n Simple_repeat Simple_repeat 1 55 0 5 721 311 376 83 17 chr15 17863067 17863248 -85631726 - B3A SINE B2 -4 194 2 5 721 306 368 21 88 chr15 17863528 17863776 -85631198 - B4A SINE B4 0 292 59 5 721 2057 111 10 19 chr15 17863776 17864088 -85630886 + RLTR27 LTR ERVK 1 309 0 5 721 306 368 21 88 chr15 17864088 17864122 -85630852 - B4A SINE B4 -234 58 29 5 721 980 239 13 31 chr15 17865339 17865564 -85629410 + 7SK RNA RNA 16 236 -95 5 721 405 0 0 0 chr15 17865645 17865690 -85629284 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 721 335 301 35 121 chr15 17866282 17866456 -85628518 + RSINE1 SINE B4 7 165 0 5 721 285 143 43 21 chr15 17866465 17866558 -85628416 + (CAGAGA)n Simple_repeat Simple_repeat 6 100 0 5 721 467 122 61 0 chr15 17866858 17866940 -85628034 - Lx LINE L1 -587 6067 5981 5 721 2153 78 48 0 chr15 17866937 17867230 -85627744 - L1_Mus3 LINE L1 -310 6328 6022 5 721 1643 89 74 41 chr15 17867230 17867605 -85627369 + L1_Mus3 LINE L1 6350 6638 0 5 721 3767 120 8 19 chr15 17867605 17867875 -85627099 + Lx LINE L1 6069 6335 -319 5 721 3318 18 2 10 chr15 17867875 17868268 -85626706 + RLTR10 LTR ERVK 1 390 0 5 721 3767 120 8 19 chr15 17868268 17868584 -85626390 + Lx LINE L1 6336 6649 -5 5 721 1805 180 20 20 chr15 17868918 17869269 -85625705 - RMER6C LTR ERVK -337 353 3 5 721 24 0 0 0 chr15 17869592 17869616 -85625358 + AT_rich Low_complexity Low_complexity 1 24 0 5 721 38 39 0 0 chr15 17869703 17869755 -85625219 + AT_rich Low_complexity Low_complexity 1 52 0 5 721 46 68 0 0 chr15 17870100 17870188 -85624786 + AT_rich Low_complexity Low_complexity 1 88 0 5 721 335 289 114 68 chr15 17870204 17870423 -85624551 - Lx8 LINE L1 -557 6916 6688 5 721 35 24 0 0 chr15 17871157 17871199 -85623775 + AT_rich Low_complexity Low_complexity 1 42 0 5 721 38 51 0 0 chr15 17871252 17871311 -85623663 + AT_rich Low_complexity Low_complexity 1 59 0 5 721 309 304 45 0 chr15 17871417 17871529 -85623445 - MTD LTR MaLR -2 417 301 5 721 428 162 30 10 chr15 17871529 17871629 -85623345 + Lx LINE L1 6552 6653 -1 5 721 3115 28 0 0 chr15 17871668 17872029 -85622945 - L1Md_T LINE L1 0 5883 5523 5 721 5908 36 0 0 chr15 17872029 17872732 -85622242 + L1Md_T LINE L1 5880 6582 0 5 721 618 351 83 4 chr15 17872749 17873015 -85621959 - MTD LTR MaLR -128 291 5 5 721 262 338 143 35 chr15 17873048 17873278 -85621696 + MLT1D LTR MaLR 100 354 -151 5 721 2525 241 142 52 chr15 17873291 17874543 -85620431 + L1_Mur3 LINE L1 67 1422 -4458 5 721 360 0 0 0 chr15 17874548 17874588 -85620386 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 721 1604 191 43 6 chr15 17874588 17874940 -85620034 + L1_Mur3 LINE L1 3819 4183 -1697 5 721 2059 94 35 25 chr15 17874940 17875007 -85619967 - MT2B2 LTR ERVL -2 582 514 5 721 3299 169 75 66 chr15 17875007 17875905 -85619069 - RMER17A2 LTR ERVK 0 906 1 5 721 2059 98 38 24 chr15 17875905 17876167 -85618807 - MT2B2 LTR ERVL -71 513 210 5 721 327 87 0 0 chr15 17876155 17876201 -85618773 - MT2B2 LTR ERVL -538 46 1 5 721 324 259 25 0 chr15 17876228 17876309 -85618665 - MurERV4-int LTR ERVK -902 5648 5566 5 721 1218 327 37 14 chr15 17876437 17876999 -85617975 - MurERV4-int LTR ERVK -167 5093 4519 5 721 1316 82 11 16 chr15 17877355 17877541 -85617433 + L1Md_F2 LINE L1 750 934 -5682 5 721 14599 80 5 15 chr15 17877518 17879558 -85615416 + L1Md_F2 LINE L1 3568 5586 -297 5 721 7363 79 5 6 chr15 17879558 17880554 -85614420 + L1Md_F2 LINE L1 5587 6581 -1 5 721 504 140 0 0 chr15 17880566 17880673 -85614301 + (A)n Simple_repeat Simple_repeat 1 107 0 5 721 1282 117 0 0 chr15 17880798 17880986 -85613988 + B2_Mm2 SINE B2 1 188 -7 5 721 916 151 0 7 chr15 17882131 17882284 -85612690 - L1_Mus4 LINE L1 -399 6237 6086 5 721 554 53 10 21 chr15 17882284 17882380 -85612594 + L1_Mus3 LINE L1 6534 6628 -10 5 721 207 243 42 14 chr15 17882533 17882604 -85612370 + (CATATA)n Simple_repeat Simple_repeat 5 77 0 5 721 423 0 0 0 chr15 17882604 17882651 -85612323 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 721 611 103 0 25 chr15 17882980 17883100 -85611874 + (TC)n Simple_repeat Simple_repeat 1 117 0 5 721 23 0 0 0 chr15 17883688 17883711 -85611263 + AT_rich Low_complexity Low_complexity 1 23 0 5 721 348 272 163 68 chr15 17884752 17885004 -85609970 + MTC-int LTR MaLR 889 1164 -94 5 721 2253 201 63 67 chr15 17885007 17885557 -85609417 - RMER19C LTR ERVK 0 611 1 5 721 3111 193 52 58 chr15 17885560 17886716 -85608258 - MurERV4_19-int LTR ERVK -4 5776 4703 5 721 2306 149 14 21 chr15 17886716 17887141 -85607833 - MurERV4_19-int LTR ERVK -1267 4513 4092 5 721 248 272 89 36 chr15 17887153 17887321 -85607653 - Lx7 LINE L1 -1503 6193 6017 5 721 306 0 0 0 chr15 17887332 17887366 -85607608 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 5 721 335 218 10 0 chr15 17887408 17887509 -85607465 + GA-rich Low_complexity Low_complexity 1 102 0 5 721 248 279 23 0 chr15 17887537 17887623 -85607351 + GA-rich Low_complexity Low_complexity 2 89 0 5 721 5745 231 76 62 chr15 17887627 17889902 -85605072 - Lx7 LINE L1 -1685 6011 3801 5 721 3222 43 5 2 chr15 17889902 17890297 -85604677 - MTA_Mm LTR MaLR 0 396 1 5 721 5745 222 82 57 chr15 17890297 17890598 -85604376 - Lx7 LINE L1 -2079 3801 3491 5 721 312 48 0 0 chr15 17890598 17890640 -85604334 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 721 5745 222 82 57 chr15 17890640 17890997 -85603977 - Lx7 LINE L1 -2390 3490 3130 5 721 468 281 100 15 chr15 17891037 17891308 -85603666 - Lx7 LINE L1 -3721 2159 1866 5 721 832 134 28 55 chr15 17892030 17892212 -85602762 - L1_Mus3 LINE L1 -6 6632 6456 5 721 861 20 0 0 chr15 17892212 17892311 -85602663 + L1_Mus4 LINE L1 5651 5749 -887 5 721 2451 98 41 5 chr15 17892311 17892679 -85602295 - MTB LTR MaLR -19 381 1 5 721 459 233 8 25 chr15 17892679 17892798 -85602176 + Lx4A LINE L1 6886 7002 -56 5 721 568 301 60 20 chr15 17892764 17892964 -85602010 - Lx7 LINE L1 -7245 483 276 5 721 216 375 11 96 chr15 17892998 17893073 -85601901 + RSINE1 SINE B4 4 73 -92 5 721 221 0 35 0 chr15 17893073 17893102 -85601872 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 5 721 216 375 11 96 chr15 17893102 17893203 -85601771 + RSINE1 SINE B4 74 165 0 5 721 198 128 0 0 chr15 17893229 17893268 -85601706 + (GA)n Simple_repeat Simple_repeat 2 40 0 5 721 960 152 54 11 chr15 17893345 17893531 -85601443 - B2_Mm2 SINE B2 -1 194 1 5 721 305 356 100 48 chr15 17894334 17894585 -85600389 + B4A SINE B4 11 274 -18 5 721 21 0 0 0 chr15 17895122 17895143 -85599831 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 270 0 0 0 chr15 17895204 17895234 -85599740 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 721 344 401 7 29 chr15 17895253 17895389 -85599585 - RSINE1 SINE B4 -29 136 4 5 721 570 86 0 0 chr15 17895442 17895523 -85599451 + (TTCC)n Simple_repeat Simple_repeat 3 83 0 5 721 37 23 0 0 chr15 17895777 17895821 -85599153 + AT_rich Low_complexity Low_complexity 1 44 0 5 721 248 252 52 0 chr15 17896456 17896571 -85598403 + BC1_Mm scRNA scRNA 9 129 -23 5 721 235 96 51 64 chr15 17896571 17896649 -85598325 + A-rich Low_complexity Low_complexity 3 79 0 5 721 21 0 0 0 chr15 17896769 17896790 -85598184 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 21 36 0 0 chr15 17897247 17897275 -85597699 + AT_rich Low_complexity Low_complexity 1 28 0 5 721 25 31 0 0 chr15 17897341 17897373 -85597601 + AT_rich Low_complexity Low_complexity 1 32 0 5 721 1651 191 34 0 chr15 17897959 17898411 -85596563 - L1VL4 LINE L1 -2496 1063 589 5 721 948 95 0 0 chr15 17900664 17900801 -85594173 + (GGAGA)n Simple_repeat Simple_repeat 2 138 0 5 721 239 54 27 0 chr15 17900839 17900876 -85594098 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 721 492 18 0 0 chr15 17901363 17901420 -85593554 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 721 183 80 0 0 chr15 17901420 17901444 -85593530 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 721 207 0 0 0 chr15 17902106 17902129 -85592845 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 721 656 248 73 45 chr15 17902130 17902417 -85592557 - Lx2B LINE L1 -6 6994 6700 5 721 356 243 0 98 chr15 17902434 17902557 -85592417 - ORR1C2 LTR MaLR -264 120 10 5 721 1069 224 88 34 chr15 17903543 17903792 -85591182 + ORR1C2 LTR MaLR 74 326 -58 5 721 189 0 0 0 chr15 17903792 17903813 -85591161 + (TA)n Simple_repeat Simple_repeat 2 22 0 5 721 1069 224 88 34 chr15 17903813 17903858 -85591116 + ORR1C2 LTR MaLR 327 383 -1 5 721 202 216 0 0 chr15 17905271 17905322 -85589652 + (TTA)n Simple_repeat Simple_repeat 1 51 0 5 721 29 28 0 0 chr15 17905527 17905563 -85589411 + AT_rich Low_complexity Low_complexity 1 36 0 5 721 266 299 213 7 chr15 17906129 17906284 -85588690 + L1MCa LINE L1 306 492 -6016 5 721 309 41 65 39 chr15 17906285 17906362 -85588612 + (CAAAA)n Simple_repeat Simple_repeat 3 81 0 5 721 207 179 0 0 chr15 17906682 17906721 -85588253 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 721 217 158 0 26 chr15 17906723 17906762 -85588212 + GA-rich Low_complexity Low_complexity 1 38 0 6 721 1582 284 68 35 chr15 17906936 17907634 -85587340 + RMER1C Other Other 28 1059 -283 6 721 261 188 14 28 chr15 17907691 17907762 -85587212 + RMER1C Other Other 1273 1342 0 6 721 295 302 61 18 chr15 17907869 17908034 -85586940 + L1MCa LINE L1 2650 2821 -3500 5 721 740 289 89 53 chr15 17908033 17908748 -85586226 + L1MCa LINE L1 4311 5051 -1270 5 721 2921 87 36 7 chr15 17909838 17910278 -85584696 - Lx3_Mus LINE L1 -8 7001 6549 6 721 1326 96 104 4 chr15 17910278 17910508 -85584466 + Lx3_Mus LINE L1 6037 6289 -720 6 721 239 167 46 77 chr15 17910515 17910580 -85584394 + RMER20A LTR ERVK 186 248 -268 6 721 1331 43 0 0 chr15 17910580 17910742 -85584232 - L1_Mm LINE L1 -1016 4867 4706 6 721 7779 39 7 0 chr15 17910742 17911685 -85583289 + L1Md_T LINE L1 5633 6582 0 6 721 1420 80 0 0 chr15 17911685 17911872 -85583102 + Lx3_Mus LINE L1 6272 6458 -551 6 721 468 0 0 0 chr15 17911987 17912039 -85582935 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 721 287 269 0 0 chr15 17912904 17912971 -85582003 - MTD LTR MaLR -154 265 199 6 721 852 82 0 0 chr15 17912971 17913093 -85581881 + (TCC)n Simple_repeat Simple_repeat 2 123 0 6 721 428 0 0 19 chr15 17913259 17913312 -85581662 + (TAA)n Simple_repeat Simple_repeat 3 54 0 6 721 3773 281 114 24 chr15 17913335 17914216 -85580758 - Lx7 LINE L1 -240 7456 6515 6 721 1956 107 20 3 chr15 17914216 17914515 -85580459 - L1_Mus4 LINE L1 0 6636 6333 6 721 3773 281 114 24 chr15 17914515 17914828 -85580146 - Lx7 LINE L1 -1182 6514 6189 6 721 483 48 0 0 chr15 17914828 17914890 -85580084 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 721 3773 281 114 24 chr15 17914890 17914974 -85580000 - Lx7 LINE L1 -1508 6188 6077 6 721 1012 91 7 0 chr15 17914974 17915117 -85579857 - B1_Mus1 SINE Alu 0 148 5 6 721 3773 281 114 24 chr15 17915117 17915323 -85579651 - Lx7 LINE L1 -1620 6076 5841 6 721 48 0 0 0 chr15 17915323 17915371 -85579603 + AT_rich Low_complexity Low_complexity 1 48 0 6 721 295 243 13 63 chr15 17915600 17915679 -85579295 - MTEb LTR MaLR -5 374 300 6 721 23 33 0 0 chr15 17916258 17916288 -85578686 + AT_rich Low_complexity Low_complexity 1 30 0 6 721 243 0 0 0 chr15 17916585 17916612 -85578362 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 721 1116 300 25 25 chr15 17916613 17916972 -85578002 - MTEa LTR MaLR -20 359 1 6 721 202 133 21 62 chr15 17917079 17917114 -85577860 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 721 441 0 0 0 chr15 17917114 17917163 -85577811 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 721 202 133 21 62 chr15 17917163 17917175 -85577799 + (TG)n Simple_repeat Simple_repeat 2 13 0 6 721 360 0 0 0 chr15 17918789 17918829 -85576145 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 721 375 23 0 0 chr15 17918829 17918872 -85576102 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 721 450 333 13 6 chr15 17919289 17919446 -85575528 - MTD LTR MaLR 0 419 262 6 721 1242 230 43 64 chr15 17919647 17920178 -85574796 + RLTR1D LTR ERV1 1 605 0 6 721 306 383 21 7 chr15 17920191 17920333 -85574641 + Lx8 LINE L1 7136 7279 -194 6 721 24 53 0 0 chr15 17920738 17920776 -85574198 + AT_rich Low_complexity Low_complexity 1 38 0 6 721 912 72 0 0 chr15 17921746 17921884 -85573090 + (TC)n Simple_repeat Simple_repeat 2 139 0 6 721 237 333 0 0 chr15 17921939 17921993 -85572981 - ID_B1 SINE B4 -92 132 79 6 721 246 32 0 0 chr15 17922813 17922844 -85572130 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 6 721 1335 101 9 14 chr15 17923096 17923317 -85571657 + L1_Mus4 LINE L1 6409 6628 -8 6 721 231 297 89 13 chr15 17923328 17923485 -85571489 + L1MB1 LINE L1 6000 6168 0 6 721 331 68 34 0 chr15 17924375 17924434 -85570540 + (TTTTG)n Simple_repeat Simple_repeat 2 62 0 6 721 3436 97 4 6 chr15 17924639 17925139 -85569835 - Lx3_Mus LINE L1 -12 6997 6499 6 721 3042 82 69 8 chr15 17925139 17925616 -85569358 + L1_Mur1 LINE L1 1599 2104 -3782 6 721 3398 106 10 0 chr15 17925643 17926136 -85568838 - Lx3_Mus LINE L1 -470 6184 5687 6 721 722 286 20 25 chr15 17926136 17926337 -85568637 - ORR1D1 LTR MaLR -170 204 5 6 721 500 188 7 22 chr15 17926611 17926747 -85568227 + (CATATA)n Simple_repeat Simple_repeat 5 138 0 6 721 333 0 0 0 chr15 17926808 17926845 -85568129 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 6 721 605 297 51 75 chr15 17926874 17927129 -85567845 + Lx8 LINE L1 6407 6655 -818 6 721 240 35 0 0 chr15 17927235 17927264 -85567710 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 721 459 209 0 0 chr15 17927264 17927369 -85567605 + (TA)n Simple_repeat Simple_repeat 2 106 0 6 721 246 234 118 47 chr15 17927810 17927895 -85567079 + MER70B LTR ERVL 62 152 -426 6 721 21 89 0 0 chr15 17927977 17928033 -85566941 + AT_rich Low_complexity Low_complexity 1 56 0 6 721 592 292 109 21 chr15 17928090 17928373 -85566601 + RMER5 LTR ERV1 46 353 -181 6 721 289 374 11 86 chr15 17928396 17928583 -85566391 + B3 SINE B2 40 212 -4 6 721 374 267 29 0 chr15 17929028 17929133 -85565841 - B3A SINE B2 -77 121 14 6 721 1142 68 0 0 chr15 17930027 17930174 -85564800 - B1_Mm SINE Alu 0 147 1 6 721 269 335 97 19 chr15 17930267 17930474 -85564500 - MLT1C LTR MaLR -242 225 3 6 721 24 32 0 0 chr15 17930773 17930804 -85564170 + AT_rich Low_complexity Low_complexity 1 31 0 6 721 459 52 0 0 chr15 17931610 17931668 -85563306 + (TA)n Simple_repeat Simple_repeat 2 59 0 6 721 357 370 7 0 chr15 17932593 17932728 -85562246 + ID_B1 SINE B4 86 221 -3 6 721 690 306 62 20 chr15 17933066 17933419 -85561555 + ORR1D2 LTR MaLR 1 368 -2 6 721 346 286 45 0 chr15 17934035 17934147 -85560827 + PB1D7 SINE Alu 2 118 -2 6 721 300 37 18 36 chr15 17934967 17935023 -85559951 + (TTTTTG)n Simple_repeat Simple_repeat 1 55 0 6 721 656 192 24 30 chr15 17935371 17935537 -85559437 - Lx4A LINE L1 -10 7048 6884 6 721 2633 102 15 10 chr15 17935538 17935933 -85559041 + MTB LTR MaLR 4 400 0 6 721 4295 175 37 12 chr15 17935932 17936769 -85558205 + MTB-int LTR MaLR 2 859 -399 6 721 244 263 53 0 chr15 17936770 17936846 -85558128 - Lx4A LINE L1 -703 6355 6276 6 721 1410 97 57 14 chr15 17936846 17937055 -85557919 + L1_Mur2 LINE L1 5470 5687 -190 6 721 249 159 0 0 chr15 17937088 17937132 -85557842 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 721 2387 241 45 4 chr15 17937783 17938332 -85556642 + Lx5 LINE L1 6477 7048 -2 6 721 1885 320 29 60 chr15 17938609 17938807 -85556167 + Lx7 LINE L1 6296 6470 -1226 6 721 1668 52 0 0 chr15 17938807 17939017 -85555957 - L1Md_T LINE L1 0 6582 6373 6 721 955 9 0 0 chr15 17939017 17939124 -85555850 - U6 snRNA snRNA 0 107 1 6 721 1885 320 29 60 chr15 17939124 17939762 -85555212 + Lx7 LINE L1 6471 7106 -590 6 721 475 340 169 19 chr15 17939986 17940589 -85554385 - Lx8 LINE L1 -377 7096 6402 6 721 401 0 0 20 chr15 17940589 17940639 -85554335 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 6 721 307 348 141 22 chr15 17940639 17940703 -85554271 - Lx8 LINE L1 -1072 6401 6333 6 721 251 93 0 23 chr15 17940805 17940849 -85554125 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 6 721 734 220 0 8 chr15 17940855 17940988 -85553986 - B1_Mur4 SINE Alu -8 142 11 6 721 43 56 0 0 chr15 17943393 17943464 -85551510 + AT_rich Low_complexity Low_complexity 1 71 0 6 721 1091 95 0 0 chr15 17943526 17943673 -85551301 + B1_Mm SINE Alu 1 147 0 6 721 418 343 25 15 chr15 17943688 17943889 -85551085 - B3 SINE B2 -10 206 4 6 721 2126 289 60 50 chr15 17944352 17945213 -85549761 - Lx9 LINE L1 -469 7175 6306 6 721 393 22 0 0 chr15 17945670 17945716 -85549258 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 721 360 0 0 0 chr15 17945995 17946035 -85548939 + (CAA)n Simple_repeat Simple_repeat 2 41 0 6 721 402 289 94 6 chr15 17946454 17946635 -85548339 + B3 SINE B2 1 197 -19 6 721 719 208 112 15 chr15 17947975 17948180 -85546794 + MTC LTR MaLR 1 225 -196 6 721 216 271 0 14 chr15 17948193 17948264 -85546710 + GA-rich Low_complexity Low_complexity 4 73 0 6 721 947 134 12 0 chr15 17948269 17948433 -85546541 + (GGAA)n Simple_repeat Simple_repeat 3 168 0 6 721 906 179 118 15 chr15 17948438 17948642 -85546332 + MTC LTR MaLR 196 420 -1 6 721 189 0 0 0 chr15 17949063 17949084 -85545890 + (T)n Simple_repeat Simple_repeat 1 21 0 6 721 1005 129 12 0 chr15 17949687 17949850 -85545124 - Lx2 LINE L1 -353 6644 6480 6 721 515 321 54 40 chr15 17950490 17950714 -85544260 - ORR1E LTR MaLR 0 370 144 6 721 552 194 305 12 chr15 17950763 17950930 -85544044 - B3 SINE B2 0 216 1 6 721 535 313 13 13 chr15 17950932 17951084 -85543890 - ORR1E LTR MaLR -199 160 9 6 721 397 253 98 54 chr15 17951216 17951421 -85543553 + B3 SINE B2 3 216 0 6 721 22 70 0 0 chr15 17953048 17953091 -85541883 + AT_rich Low_complexity Low_complexity 1 43 0 6 721 32 0 0 0 chr15 17953392 17953424 -85541550 + AT_rich Low_complexity Low_complexity 1 32 0 6 721 420 55 0 0 chr15 17953694 17953749 -85541225 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 721 1790 144 13 6 chr15 17954037 17954351 -85540623 - Lx2 LINE L1 -2 6995 6680 6 721 273 221 0 0 chr15 17954445 17954513 -85540461 + GA-rich Low_complexity Low_complexity 2 69 0 6 721 754 357 39 24 chr15 17954747 17955077 -85539897 - LTR16C LTR ERVL -154 335 1 6 721 782 284 102 57 chr15 17956470 17956563 -85538411 + Lx7 LINE L1 7276 7361 -335 6 90 3416 57 2 0 chr15 17956563 17957004 -85537970 - L1Md_F2 LINE L1 -3 6579 6138 6 722 782 284 102 57 chr15 17957004 17957160 -85537814 + Lx7 LINE L1 7362 7539 -157 6 722 225 0 0 0 chr15 17957160 17957185 -85537789 + (ATTG)n Simple_repeat Simple_repeat 2 26 0 6 722 782 284 102 57 chr15 17957185 17957337 -85537637 + Lx7 LINE L1 7540 7695 -1 6 722 186 167 0 0 chr15 17957337 17957373 -85537601 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 722 293 121 53 42 chr15 17957946 17958041 -85536933 + (CAGAGA)n Simple_repeat Simple_repeat 4 99 0 6 722 612 270 87 36 chr15 17958245 17958464 -85536510 + MTE2b LTR MaLR 148 377 -2 6 722 465 19 0 0 chr15 17959209 17959263 -85535711 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 722 3441 254 104 21 chr15 17959703 17960719 -85534255 + Lx5 LINE L1 5946 7046 -4 6 722 635 211 82 29 chr15 17963019 17963263 -85531711 + L1MA6 LINE L1 6034 6290 -10 6 722 413 116 0 14 chr15 17965242 17965312 -85529662 + (TCC)n Simple_repeat Simple_repeat 3 71 0 7 722 26 50 0 0 chr15 17966111 17966151 -85528823 + AT_rich Low_complexity Low_complexity 1 40 0 7 722 394 292 75 30 chr15 17966900 17967165 -85527809 + L1M2 LINE L1 2217 2493 -3650 7 722 309 353 3 3 chr15 17967408 17967534 -85527440 + ID2 SINE ID 5 130 -22 7 722 216 0 0 0 chr15 17967571 17967595 -85527379 + (CAA)n Simple_repeat Simple_repeat 1 24 0 7 722 367 273 18 36 chr15 17967929 17968096 -85526878 + L1M2 LINE L1 2515 2678 -3465 7 722 22 56 0 0 chr15 17968636 17968672 -85526302 + AT_rich Low_complexity Low_complexity 1 36 0 7 722 316 255 67 19 chr15 17968769 17968873 -85526101 + L1M2 LINE L1 3657 3765 -2378 7 722 226 247 21 0 chr15 17969182 17969275 -85525699 + L1M2 LINE L1 4416 4510 -1633 7 722 629 196 42 7 chr15 17969312 17969456 -85525518 + Lx6 LINE L1 6847 6995 -465 7 722 183 156 0 0 chr15 17969529 17969561 -85525413 + GA-rich Low_complexity Low_complexity 2 33 0 7 722 2720 80 5 25 chr15 17969561 17969956 -85525018 - L1_Mus3 LINE L1 -641 5997 5611 7 722 3851 94 37 9 chr15 17969956 17970526 -85524448 + L1_Mus3 LINE L1 6048 6633 -5 7 722 909 288 10 73 chr15 17970526 17970814 -85524160 + Lx6 LINE L1 6974 7243 -217 7 722 304 127 14 40 chr15 17971151 17971225 -85523749 + (TTTA)n Simple_repeat Simple_repeat 3 74 0 7 722 1863 131 19 3 chr15 17971241 17971554 -85523420 - Lx LINE L1 -3 6978 6661 7 722 2492 132 9 24 chr15 17972329 17972748 -85522226 - Lx LINE L1 -1 6653 6241 7 722 268 353 20 0 chr15 17973323 17973425 -85521549 + Lx7 LINE L1 7193 7296 -400 7 722 230 0 33 0 chr15 17973540 17973570 -85521404 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 722 258 209 122 36 chr15 17973755 17973894 -85521080 + L1M2 LINE L1 5286 5436 -735 7 722 3189 45 12 2 chr15 17974140 17974544 -85520430 + L1Md_F2 LINE L1 6174 6581 -1 7 722 1268 315 86 88 chr15 17974907 17975792 -85519182 + Lx6 LINE L1 6550 7432 -28 7 722 2148 74 26 16 chr15 17976033 17976337 -85518637 + IAPLTR2b LTR ERVK 1 307 -20 7 722 22 0 0 0 chr15 17976592 17976614 -85518360 + AT_rich Low_complexity Low_complexity 1 22 0 7 722 345 145 0 0 chr15 17976627 17976703 -85518271 + (A)n Simple_repeat Simple_repeat 1 76 0 7 722 994 94 0 0 chr15 17976703 17976841 -85518133 + B1_Mus1 SINE Alu 4 141 -7 7 722 261 57 0 0 chr15 17976845 17976880 -85518094 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 722 371 232 141 40 chr15 17977389 17977488 -85517486 + B3 SINE B2 9 117 -99 7 722 25 0 0 0 chr15 17977509 17977534 -85517440 + AT_rich Low_complexity Low_complexity 1 25 0 7 722 25 0 0 0 chr15 17978204 17978229 -85516745 + AT_rich Low_complexity Low_complexity 1 25 0 7 722 237 312 0 0 chr15 17978413 17978490 -85516484 - MER53 DNA hAT 0 193 117 7 722 9388 115 31 26 chr15 17978624 17980630 -85514344 + Lx3A LINE L1 4419 6407 -574 7 722 453 152 54 0 chr15 17980628 17980720 -85514254 - L1_Mur3 LINE L1 -2115 3765 3669 7 722 6116 151 12 5 chr15 17980717 17981730 -85513244 + Lx LINE L1 5610 6629 -25 7 722 494 31 16 0 chr15 17981731 17981795 -85513179 + (TA)n Simple_repeat Simple_repeat 1 65 0 7 722 732 39 0 10 chr15 17982993 17983096 -85511878 - L1Md_A LINE L1 -1 6581 6480 7 722 21 0 0 0 chr15 17983382 17983403 -85511571 + AT_rich Low_complexity Low_complexity 1 21 0 7 722 264 59 0 0 chr15 17984203 17984237 -85510737 + (A)n Simple_repeat Simple_repeat 1 34 0 7 722 543 222 13 34 chr15 17984562 17984584 -85510390 + ID_B1 SINE B4 79 224 0 7 722 990 55 0 0 chr15 17984584 17984711 -85510263 + B1_Mus1 SINE Alu 22 148 0 7 722 225 0 0 0 chr15 17984716 17984741 -85510233 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 7 722 277 250 11 0 chr15 17985343 17985435 -85509539 - Lx4A LINE L1 -1 7057 6965 7 722 534 103 0 0 chr15 17985435 17985513 -85509461 + (TCC)n Simple_repeat Simple_repeat 2 79 0 7 722 297 75 0 0 chr15 17985548 17985588 -85509386 + (TCC)n Simple_repeat Simple_repeat 3 42 0 7 722 251 285 7 44 chr15 17985588 17985724 -85509250 - Lx4B LINE L1 -32 7026 6896 7 722 531 31 0 0 chr15 17985749 17985814 -85509160 + (TG)n Simple_repeat Simple_repeat 1 65 0 7 722 504 0 0 0 chr15 17985814 17985869 -85509105 + (GA)n Simple_repeat Simple_repeat 1 56 0 7 722 207 0 0 0 chr15 17986103 17986126 -85508848 + (CAA)n Simple_repeat Simple_repeat 2 24 0 7 722 225 333 67 50 chr15 17986536 17986620 -85508354 - MLT1H-int LTR MaLR -162 1247 1166 7 722 4396 14 0 0 chr15 17986620 17987113 -85507861 + MT2_Mm LTR ERVL 1 493 0 7 722 225 333 67 50 chr15 17987113 17987208 -85507766 - MLT1H-int LTR MaLR -244 1165 1065 7 722 29 60 0 0 chr15 17987870 17987920 -85507054 + AT_rich Low_complexity Low_complexity 1 50 0 7 722 614 79 11 0 chr15 17988361 17988450 -85506524 + (TA)n Simple_repeat Simple_repeat 2 91 0 7 722 1494 260 37 43 chr15 17988716 17989509 -85505465 - L1_Mur2 LINE L1 -4155 1722 892 7 722 831 256 13 91 chr15 17989870 17990265 -85504709 - L1_Mur3 LINE L1 -1437 4443 4080 7 722 2171 236 44 60 chr15 17990573 17990807 -85504167 + RMER19C LTR ERVK 1 248 -363 7 722 2427 112 60 3 chr15 17990807 17991192 -85503782 - MTB_Mm LTR MaLR 0 407 1 7 722 2171 236 44 60 chr15 17991192 17991574 -85503400 + RMER19C LTR ERVK 249 607 -4 7 722 614 233 113 0 chr15 17991578 17991728 -85503246 + RMER1C Other Other 782 948 -394 7 722 563 286 118 8 chr15 17991739 17991993 -85502981 + RMER1C Other Other 1060 1341 -1 7 722 349 335 90 52 chr15 17992501 17992734 -85502240 + B4 SINE B4 9 250 -42 7 722 1077 96 7 0 chr15 17992830 17992976 -85501998 - B1_Mus1 SINE Alu -1 147 1 7 722 528 72 0 0 chr15 17992976 17993045 -85501929 - B2_Mm2 SINE B2 -126 69 1 7 722 1680 254 83 14 chr15 17993584 17994135 -85500839 - Lx9 LINE L1 -48 7596 7008 7 722 773 279 5 9 chr15 17994151 17994372 -85500602 + Lx9 LINE L1 6759 6978 -666 7 722 2155 148 82 25 chr15 17995954 17996356 -85498618 - Lx3B LINE L1 -13 6960 6536 7 722 243 103 103 0 chr15 17996342 17996381 -85498593 + Lx3B LINE L1 6523 6565 -408 7 722 2055 138 50 6 chr15 17996406 17996769 -85498205 + Lx3B LINE L1 6184 6562 -411 7 722 3010 49 15 3 chr15 17996973 17997362 -85497612 - L1Md_F3 LINE L1 0 6584 6191 7 722 913 129 7 0 chr15 17997630 17997769 -85497205 + B1_Mus1 SINE Alu 1 140 -8 7 722 324 178 0 0 chr15 17997781 17997854 -85497120 + A-rich Low_complexity Low_complexity 1 73 0 7 722 26 0 0 0 chr15 17998150 17998176 -85496798 + AT_rich Low_complexity Low_complexity 1 26 0 7 722 210 304 71 0 chr15 17998275 17998331 -85496643 + PB1D7 SINE Alu 1 60 -60 7 722 207 0 0 0 chr15 17999073 17999096 -85495878 + (T)n Simple_repeat Simple_repeat 1 23 0 7 722 189 132 0 0 chr15 17999503 17999541 -85495433 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 7 722 584 299 68 24 chr15 18000058 18000264 -85494710 - B4A SINE B4 -33 259 45 1 722 30 0 0 0 chr15 18000371 18000401 -85494573 + AT_rich Low_complexity Low_complexity 1 30 0 2 722 502 306 83 65 chr15 18000404 18001180 -85493794 - L1MC LINE L1 -722 5611 4822 3 722 246 322 11 11 chr15 18001719 18001807 -85493167 + Lx9 LINE L1 6599 6686 -958 4 722 343 72 159 3 chr15 18001811 18001869 -85493105 + Lx2 LINE L1 6580 6645 -352 5 722 1218 122 68 10 chr15 18001869 18002076 -85492898 + Lx2 LINE L1 6779 6997 0 6 722 333 92 125 97 chr15 18002076 18002089 -85492885 + Lx2 LINE L1 6645 6653 -347 5 722 1416 313 61 47 chr15 18002087 18002393 -85492581 + Lx9 LINE L1 6685 6997 -647 4 722 243 0 0 0 chr15 18002393 18002420 -85492554 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 722 1416 313 61 47 chr15 18002420 18002888 -85492086 + Lx9 LINE L1 6998 7469 -175 4 722 362 359 80 25 chr15 18003424 18003624 -85491350 + ID_B1 SINE B4 7 217 -7 8 722 234 315 43 21 chr15 18003780 18003874 -85491100 - B1F SINE Alu -7 142 47 9 722 347 194 19 19 chr15 18004085 18004190 -85490784 + CT-rich Low_complexity Low_complexity 3 107 0 1 722 1344 354 82 62 chr15 18004190 18005421 -85489553 + ORR1E-int LTR MaLR 47 1302 -68 1 722 466 348 49 16 chr15 18005471 18005655 -85489319 + ORR1E LTR MaLR 1 190 -169 1 722 202 116 47 0 chr15 18005655 18005698 -85489276 + CT-rich Low_complexity Low_complexity 1 45 0 1 722 262 333 45 56 chr15 18005698 18005876 -85489098 + ORR1E LTR MaLR 201 376 -3 1 722 2015 138 25 14 chr15 18006325 18006685 -85488289 - L1_Mur2 LINE L1 -591 5286 4923 1 722 839 175 29 24 chr15 18006669 18006691 -85488283 + L1_Mur2 LINE L1 4720 4742 -1135 1 722 1074 82 0 20 chr15 18006691 18006841 -85488133 + B1_Mus1 SINE Alu 2 148 0 1 722 839 175 29 24 chr15 18006841 18007023 -85487951 + L1_Mur2 LINE L1 4743 4925 -952 1 722 2414 163 7 0 chr15 18007030 18007440 -85487534 + Lx2 LINE L1 6585 6997 0 1 722 1754 192 76 16 chr15 18007447 18007817 -85487157 + Lx4A LINE L1 6667 7058 0 1 722 201 163 0 0 chr15 18007817 18007866 -85487108 + A-rich Low_complexity Low_complexity 6 54 0 1 722 3697 108 29 166 chr15 18008190 18009061 -85485913 + RMER17A LTR ERVK 1 751 0 1 722 21 0 0 0 chr15 18009301 18009322 -85485652 + AT_rich Low_complexity Low_complexity 1 21 0 2 722 279 0 0 0 chr15 18009345 18009376 -85485598 + (T)n Simple_repeat Simple_repeat 1 31 0 2 722 210 361 16 0 chr15 18010545 18010606 -85484368 + B1F2 SINE Alu 3 64 -85 2 722 345 109 0 0 chr15 18010963 18011018 -85483956 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 722 1355 139 35 4 chr15 18011098 18011329 -85483645 - Lx2 LINE L1 -4 6993 6756 2 722 27 73 0 0 chr15 18011594 18011649 -85483325 + AT_rich Low_complexity Low_complexity 1 55 0 2 722 853 60 8 8 chr15 18014244 18014378 -85480596 + (TAGA)n Simple_repeat Simple_repeat 4 137 0 2 722 828 346 70 15 chr15 18014391 18014734 -85480240 + MTEb LTR MaLR 9 370 -9 2 722 26 30 0 0 chr15 18015167 18015200 -85479774 + AT_rich Low_complexity Low_complexity 1 33 0 2 722 440 305 55 32 chr15 18015874 18016120 -85478854 - B3 SINE B2 -4 212 1 2 722 23 0 0 0 chr15 18016128 18016151 -85478823 + AT_rich Low_complexity Low_complexity 1 23 0 3 722 24 32 0 0 chr15 18017021 18017052 -85477922 + AT_rich Low_complexity Low_complexity 1 31 0 3 722 27 62 0 0 chr15 18017076 18017124 -85477850 + AT_rich Low_complexity Low_complexity 1 48 0 3 722 2887 103 9 5 chr15 18017468 18017887 -85477087 - BGLII LTR ERVK 0 421 1 3 722 21 0 0 0 chr15 18018870 18018891 -85476083 + AT_rich Low_complexity Low_complexity 1 21 0 3 722 760 306 96 39 chr15 18019124 18019539 -85475435 - Lx8 LINE L1 -1 7472 7034 3 722 710 327 85 77 chr15 18021159 18021912 -85473062 + L1M2 LINE L1 4559 5317 -826 3 722 26 30 0 0 chr15 18022082 18022115 -85472859 + AT_rich Low_complexity Low_complexity 1 33 0 3 722 229 0 26 53 chr15 18022776 18022814 -85472160 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 3 722 468 0 0 0 chr15 18023400 18023452 -85471522 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 722 7207 81 2 39 chr15 18024667 18025764 -85469210 + L1_Mm LINE L1 1302 2357 -3526 4 722 11829 73 2 33 chr15 18025757 18027435 -85467539 + L1_Mm LINE L1 3746 5371 -512 4 722 3346 91 0 11 chr15 18027433 18027899 -85467075 + L1Md_F2 LINE L1 5925 6385 -197 4 722 444 78 0 13 chr15 18027900 18027978 -85466996 + L1Md_F2 LINE L1 6506 6582 0 4 722 368 328 0 16 chr15 18028131 18028255 -85466719 - MTEb LTR MaLR -4 375 254 4 722 23 0 0 0 chr15 18029069 18029092 -85465882 + AT_rich Low_complexity Low_complexity 1 23 0 4 722 23 54 0 0 chr15 18029116 18029153 -85465821 + AT_rich Low_complexity Low_complexity 1 37 0 4 722 22 35 0 0 chr15 18029317 18029346 -85465628 + AT_rich Low_complexity Low_complexity 1 29 0 4 722 988 269 42 48 chr15 18029993 18030322 -85464652 - ORR1C2 LTR MaLR 0 394 58 4 722 601 181 131 7 chr15 18030279 18030424 -85464550 + RMER6C LTR ERVK 111 273 -417 4 722 1603 88 7 110 chr15 18030429 18030721 -85464253 + L1_Mus3 LINE L1 6353 6614 -24 4 722 1075 78 35 0 chr15 18030721 18030863 -85464111 + B1_Mus2 SINE Alu 1 147 0 4 722 976 214 29 50 chr15 18030864 18031079 -85463895 + RMER6C LTR ERVK 382 624 -66 4 722 3174 43 0 12 chr15 18031079 18031479 -85463495 - MTA_Mm LTR MaLR -1 395 1 5 722 976 198 9 36 chr15 18031479 18031551 -85463423 + RMER6C LTR ERVK 625 690 0 4 722 446 191 85 0 chr15 18031551 18031645 -85463329 - ORR1C2 LTR MaLR -248 136 35 4 722 3047 276 82 49 chr15 18031667 18032751 -85462223 - ORR1C2-int LTR MaLR -2 1368 249 4 722 304 340 44 64 chr15 18033452 18033656 -85461318 + MER67D LTR ERV1 3 202 -312 5 722 407 153 0 66 chr15 18033786 18033808 -85461166 + L1_Mus1 LINE L1 6369 6387 -180 5 722 458 62 0 0 chr15 18033808 18033872 -85461102 - L1Md_F2 LINE L1 -12 6570 6507 5 722 407 153 0 66 chr15 18033872 18033940 -85461034 + L1_Mus1 LINE L1 6388 6453 -114 5 722 206 105 0 50 chr15 18034629 18034669 -85460305 + (TTTAA)n Simple_repeat Simple_repeat 4 41 0 5 722 1910 336 46 36 chr15 18034780 18035875 -85459099 - Lx9 LINE L1 -171 7473 6368 5 722 250 295 36 58 chr15 18036072 18036209 -85458765 - Lx9 LINE L1 -1685 5959 5826 5 722 320 148 16 0 chr15 18036241 18036302 -85458672 + (TA)n Simple_repeat Simple_repeat 1 62 0 5 722 213 277 0 0 chr15 18036306 18036353 -85458621 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 722 998 276 182 49 chr15 18036353 18036825 -85458149 - MT2B2 LTR ERVL -49 535 1 5 722 275 174 0 42 chr15 18036864 18036936 -85458038 - ORR1B1-int LTR MaLR -1323 640 572 5 722 489 167 109 16 chr15 18036940 18037068 -85457906 - MERVL_2A-int LTR ERVL -132 5629 5490 6 722 1366 199 78 87 chr15 18037071 18037124 -85457850 - ORR1B1 LTR MaLR -2 392 340 5 722 4388 29 0 22 chr15 18037124 18037676 -85457298 + L1Md_A LINE L1 6064 6582 0 6 722 1366 199 78 87 chr15 18037676 18037980 -85456994 - ORR1B1 LTR MaLR -55 339 40 5 722 786 299 49 51 chr15 18037980 18038410 -85456564 - Lx9 LINE L1 -30 5817 5389 5 722 293 319 69 16 chr15 18038882 18038917 -85456057 - B3A SINE B2 0 198 162 6 722 372 22 0 0 chr15 18038917 18038962 -85456012 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 722 293 319 69 16 chr15 18038962 18039114 -85455860 - B3A SINE B2 -37 161 2 6 722 2849 58 0 21 chr15 18039370 18039742 -85455232 - L1_Mus1 LINE L1 -431 6136 5773 6 722 2952 65 18 0 chr15 18039742 18040127 -85454847 + L1_Mus1 LINE L1 6174 6565 -2 6 722 1895 221 45 67 chr15 18040283 18040788 -85454186 - Lx5 LINE L1 0 7050 6557 6 722 213 65 0 0 chr15 18040952 18040983 -85453991 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 722 248 167 0 0 chr15 18041055 18041097 -85453877 - RMER6C LTR ERVK -2 754 713 6 722 689 246 97 45 chr15 18041125 18041393 -85453581 + RLTR12B LTR ERVK 47 328 -200 6 722 371 275 90 100 chr15 18041377 18041656 -85453318 + RLTR12B LTR ERVK 239 514 -14 6 722 1729 243 100 44 chr15 18041667 18042286 -85452688 - RMER6C LTR ERVK -36 654 1 6 722 1610 149 26 33 chr15 18042287 18042592 -85452382 + Lx3A LINE L1 6621 6923 -58 6 722 449 192 92 0 chr15 18042579 18042709 -85452265 + Lx3_Mus LINE L1 6866 7007 -2 7 722 6007 144 85 3 chr15 18043532 18044568 -85450406 + Lx2 LINE L1 5875 6995 -2 7 722 693 128 0 0 chr15 18046242 18046367 -85448607 + (GA)n Simple_repeat Simple_repeat 2 126 0 7 722 454 290 94 0 chr15 18047037 18047175 -85447799 + RSINE1 SINE B4 11 161 -4 7 722 787 271 24 12 chr15 18048041 18048291 -85446683 - Lx7 LINE L1 -4 7692 7440 7 722 1092 30 8 0 chr15 18048289 18048421 -85446553 - L1Md_T LINE L1 -654 5928 5796 7 722 5486 34 0 0 chr15 18048421 18049067 -85445907 + L1Md_T LINE L1 5937 6582 0 7 722 266 271 31 0 chr15 18049067 18049163 -85445811 - Lx7 LINE L1 -242 7454 7356 7 722 243 237 0 0 chr15 18049916 18050009 -85444965 + (CA)n Simple_repeat Simple_repeat 2 94 0 7 722 501 170 0 0 chr15 18050038 18050150 -85444824 + (CA)n Simple_repeat Simple_repeat 2 113 0 7 722 1026 141 0 42 chr15 18050408 18050601 -85444373 - Lx LINE L1 -7 6647 6463 7 722 1331 118 0 0 chr15 18050601 18050796 -85444178 + L1_Mus4 LINE L1 6258 6452 -184 7 722 1304 186 0 4 chr15 18051297 18051534 -85443440 - RMER6D LTR ERVK 0 690 455 7 722 433 216 24 118 chr15 18051533 18051694 -85443280 - MT2B LTR ERVL -315 286 154 8 722 384 359 8 22 chr15 18051979 18052113 -85442861 - RSINE1 SINE B4 0 165 34 8 722 453 115 0 0 chr15 18053231 18053309 -85441665 + (TC)n Simple_repeat Simple_repeat 2 79 0 8 722 379 213 74 0 chr15 18053620 18053742 -85441232 + Lx9 LINE L1 7466 7596 -48 8 722 806 251 10 19 chr15 18053769 18053976 -85440998 - RMER6-int LTR ERVK -2972 205 1 7 722 1907 217 152 93 chr15 18053976 18054656 -85440318 - RMER6D LTR ERVK 0 720 1 7 722 2902 28 2 145 chr15 18054780 18055235 -85439739 - RLTR10 LTR ERVK 0 390 1 8 722 16600 21 16 1 chr15 18055237 18057151 -85437823 - RLTR10-int LTR ERVK -3 1984 41 8 722 2902 28 2 145 chr15 18057161 18057616 -85437358 - RLTR10 LTR ERVK 0 390 1 8 722 24 67 0 0 chr15 18058123 18058168 -85436806 + AT_rich Low_complexity Low_complexity 1 45 0 8 722 201 39 0 0 chr15 18059218 18059244 -85435730 + (CAA)n Simple_repeat Simple_repeat 2 27 0 8 722 213 121 0 0 chr15 18059295 18059328 -85435646 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 8 722 594 348 115 38 chr15 18059454 18059768 -85435206 + ORR1D2 LTR MaLR 33 370 0 8 722 568 305 0 7 chr15 18059768 18059920 -85435054 + ORR1D2-int LTR MaLR 1 151 -1219 8 722 1116 54 0 7 chr15 18059927 18060076 -85434898 + L1_Mus1 LINE L1 6420 6567 0 8 722 1816 136 7 16 chr15 18060154 18060445 -85434529 + L1_Mus3 LINE L1 6335 6624 -14 9 722 1141 55 14 0 chr15 18060445 18060591 -85434383 + B1_Mus1 SINE Alu 1 148 0 9 722 1816 136 7 16 chr15 18060591 18060638 -85434336 + L1_Mus3 LINE L1 6625 6638 0 9 722 3061 291 37 68 chr15 18060669 18061141 -85433833 + ORR1D2-int LTR MaLR 192 682 -688 8 722 2116 192 149 32 chr15 18061141 18061759 -85433215 - RMER6C LTR ERVK 0 690 1 9 722 3061 291 37 68 chr15 18061759 18061882 -85433092 + ORR1D2-int LTR MaLR 683 803 -567 8 722 755 66 0 9 chr15 18061882 18061989 -85432985 + (TTTC)n Simple_repeat Simple_repeat 3 108 0 9 722 3061 291 37 68 chr15 18061989 18062541 -85432433 + ORR1D2-int LTR MaLR 804 1304 -66 8 722 507 302 8 0 chr15 18062555 18062684 -85432290 - Lx6 LINE L1 -106 7354 7225 9 722 1589 275 73 60 chr15 18063110 18063266 -85431708 - RLTR40 LTR ERVK -38 779 607 9 722 507 101 0 0 chr15 18063266 18063345 -85431629 + (TG)n Simple_repeat Simple_repeat 2 80 0 9 722 1589 275 73 60 chr15 18063345 18063664 -85431310 - RLTR40 LTR ERVK -211 606 302 9 722 309 51 0 0 chr15 18063664 18063703 -85431271 + (CA)n Simple_repeat Simple_repeat 1 39 0 9 722 1589 275 73 60 chr15 18063703 18063995 -85430979 - RLTR40 LTR ERVK -516 301 1 9 722 1092 114 51 0 chr15 18065305 18065480 -85429494 + B2_Mm2 SINE B2 4 187 -8 9 722 987 157 16 16 chr15 18066801 18066989 -85427985 - B2_Mm2 SINE B2 -3 192 5 9 722 7463 72 6 10 chr15 18067010 18068365 -85426609 - L1Md_F2 LINE L1 0 6582 5232 1 722 603 227 0 0 chr15 18068572 18068726 -85426248 + (TA)n Simple_repeat Simple_repeat 1 154 0 1 722 351 0 0 0 chr15 18068767 18068806 -85426168 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 722 225 0 0 0 chr15 18069018 18069043 -85425931 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 722 365 256 0 26 chr15 18069453 18069540 -85425434 + Lx5 LINE L1 6193 6302 -748 1 722 445 282 125 21 chr15 18069600 18069947 -85425027 + L1M2 LINE L1 4849 5226 -914 1 722 258 116 0 0 chr15 18069968 18070011 -85424963 + (CATA)n Simple_repeat Simple_repeat 4 46 0 1 722 222 263 13 13 chr15 18070030 18070107 -85424867 + (TA)n Simple_repeat Simple_repeat 1 77 0 1 722 1706 50 14 0 chr15 18071610 18071828 -85423146 - L1Md_F3 LINE L1 -19 6565 6345 1 722 1300 33 0 0 chr15 18071828 18071979 -85422995 + L1Md_F3 LINE L1 6176 6326 -258 1 722 1129 241 95 6 chr15 18072016 18072342 -85422632 + Lx7 LINE L1 6964 7318 -378 1 722 547 338 95 21 chr15 18072638 18072880 -85422094 - MTE2a LTR MaLR -5 374 115 1 722 1458 274 85 10 chr15 18072892 18073104 -85421870 + Lx9 LINE L1 7051 7278 -366 1 722 1230 112 16 0 chr15 18073104 18073291 -85421683 + B2_Mm1t SINE B2 1 190 -3 1 722 1458 274 85 10 chr15 18073291 18073597 -85421377 + Lx9 LINE L1 7279 7608 -36 1 722 261 304 0 0 chr15 18073710 18073779 -85421195 - MTE2a LTR MaLR -310 69 1 1 722 2770 49 0 28 chr15 18074030 18074386 -85420588 - ORR1A0 LTR MaLR 0 346 1 1 722 28 0 0 0 chr15 18074904 18074932 -85420042 + AT_rich Low_complexity Low_complexity 1 28 0 1 722 447 220 84 52 chr15 18075409 18075658 -85419316 + Lx9 LINE L1 7382 7638 -6 1 722 29 0 0 0 chr15 18076809 18076838 -85418136 + AT_rich Low_complexity Low_complexity 1 29 0 1 722 25 0 0 0 chr15 18077062 18077087 -85417887 + AT_rich Low_complexity Low_complexity 1 25 0 1 722 732 169 22 7 chr15 18078321 18078458 -85416516 - Lx2B LINE L1 -277 6723 6585 1 722 288 311 19 0 chr15 18078457 18078563 -85416411 + Lx2 LINE L1 6890 6997 0 1 722 236 311 40 13 chr15 18078709 18078784 -85416190 + RSINE1 SINE B4 83 159 -6 1 722 2232 134 146 5 chr15 18079288 18079693 -85415281 - Lx2 LINE L1 -1 6996 6535 1 722 346 78 0 19 chr15 18079693 18079745 -85415229 - Lx2 LINE L1 -1162 5835 5785 1 722 661 271 8 0 chr15 18079769 18079902 -85415072 - B1_Mur2 SINE Alu -14 135 2 1 722 1091 114 74 0 chr15 18080251 18080426 -85414548 - B2_Mm2 SINE B2 -7 188 1 1 722 225 269 164 27 chr15 18080561 18080786 -85414188 + L1M3 LINE L1 5628 5883 -306 1 722 273 54 0 0 chr15 18081011 18081065 -85413909 + L1_Mus2 LINE L1 6513 6566 -1 1 722 9725 52 3 2 chr15 18081249 18083162 -85411812 - L1Md_F2 LINE L1 0 6582 4667 1 722 21 36 0 0 chr15 18083307 18083335 -85411639 + AT_rich Low_complexity Low_complexity 1 28 0 1 722 22 0 0 0 chr15 18083693 18083715 -85411259 + AT_rich Low_complexity Low_complexity 1 22 0 1 722 408 304 18 9 chr15 18086053 18086166 -85408808 - RSINE1 SINE B4 -42 123 10 1 722 29 28 0 0 chr15 18087180 18087216 -85407758 + AT_rich Low_complexity Low_complexity 1 36 0 1 90 1570 244 68 68 chr15 18087617 18088106 -85406868 + RMER15 LTR ERVL 56 531 -44 1 723 270 0 0 0 chr15 18088106 18088136 -85406838 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 723 1570 244 68 68 chr15 18088136 18088164 -85406810 + RMER15 LTR ERVL 532 573 -2 1 723 268 363 5 114 chr15 18088698 18088900 -85406074 + B3A SINE B2 1 180 -18 1 723 22 56 0 0 chr15 18088956 18088992 -85405982 + AT_rich Low_complexity Low_complexity 1 36 0 1 723 25 0 0 0 chr15 18089864 18089889 -85405085 + AT_rich Low_complexity Low_complexity 1 25 0 1 723 3347 171 36 5 chr15 18090523 18091139 -85403835 - Lx4A LINE L1 -525 6533 5899 1 723 2634 191 49 27 chr15 18091132 18091658 -85403316 + Lx4A LINE L1 6512 7049 -9 1 723 459 0 0 0 chr15 18091800 18091851 -85403123 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 723 2679 209 36 19 chr15 18092642 18093174 -85401800 + RLTR20A LTR ERVK 1 541 0 1 723 919 104 8 0 chr15 18094935 18095069 -85399905 - Lx LINE L1 -276 6378 6244 1 723 479 17 17 0 chr15 18095113 18095173 -85399801 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 723 39 38 0 0 chr15 18095197 18095250 -85399724 + AT_rich Low_complexity Low_complexity 1 53 0 1 723 425 358 35 44 chr15 18095734 18095962 -85399012 - RMER15 LTR ERVL -14 561 336 1 723 241 202 71 92 chr15 18095986 18096084 -85398890 - B2_Mm2 SINE B2 -94 101 6 1 723 349 232 0 48 chr15 18096280 18096384 -85398590 - Lx8 LINE L1 -553 6920 6822 1 723 675 222 115 57 chr15 18096400 18096644 -85398330 - ERVL-int LTR ERVL -2179 3578 3321 1 723 386 225 3 10 chr15 18096669 18096771 -85398203 - ERVL-int LTR ERVL -2488 3269 3193 1 723 389 196 59 49 chr15 18097213 18097315 -85397659 - RMER15 LTR ERVL -451 124 22 1 723 619 346 61 29 chr15 18097429 18097529 -85397445 - ERVL-int LTR ERVL -3377 2337 2238 1 723 3462 18 5 0 chr15 18097529 18097923 -85397051 + MTA_Mm LTR MaLR 1 396 0 1 723 619 346 61 29 chr15 18097923 18098298 -85396676 - ERVL-int LTR ERVL -3477 2237 1848 1 723 1440 238 38 109 chr15 18098408 18098710 -85396264 - MTC LTR MaLR 0 421 108 1 723 1015 107 0 0 chr15 18098710 18098850 -85396124 + B1_Mus1 SINE Alu 2 141 -7 1 723 1440 238 38 109 chr15 18098850 18098996 -85395978 - MTC LTR MaLR -314 107 5 1 723 337 266 21 0 chr15 18099138 18099232 -85395742 - ERVL-int LTR ERVL -3150 2607 2512 1 723 237 339 169 28 chr15 18099668 18099987 -85394987 - MLT-int LTR MaLR 0 1735 1372 1 723 290 77 64 32 chr15 18100294 18100388 -85394586 + T-rich Low_complexity Low_complexity 4 100 0 1 723 501 359 75 61 chr15 18100666 18101108 -85393866 + MLT2B3 LTR ERVL 29 476 -78 1 723 315 0 0 0 chr15 18101222 18101257 -85393717 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 723 29 28 0 0 chr15 18101270 18101306 -85393668 + AT_rich Low_complexity Low_complexity 1 36 0 1 723 666 352 59 7 chr15 18101414 18101835 -85393139 - ERVL-int LTR ERVL -4242 1515 1073 1 723 398 402 41 27 chr15 18103191 18103616 -85391358 - MLT2B2 LTR ERVL -116 438 1 1 723 477 90 0 0 chr15 18104680 18104747 -85390227 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 723 435 106 0 0 chr15 18104747 18104812 -85390162 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 723 321 316 49 33 chr15 18104995 18105178 -85389796 - Lx8 LINE L1 -102 7371 7186 1 723 230 287 62 21 chr15 18105223 18105319 -85389655 + Lx8 LINE L1 6892 6991 -482 1 723 23 33 0 0 chr15 18105454 18105484 -85389490 + AT_rich Low_complexity Low_complexity 1 30 0 1 723 393 164 0 0 chr15 18105586 18105659 -85389315 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 723 21 0 0 0 chr15 18106059 18106080 -85388894 + AT_rich Low_complexity Low_complexity 1 21 0 1 723 28 94 0 23 chr15 18106291 18106422 -85388552 + AT_rich Low_complexity Low_complexity 1 128 0 1 723 4738 52 3 0 chr15 18106644 18107240 -85387734 + L1Md_F2 LINE L1 5985 6582 0 1 723 267 265 105 46 chr15 18107595 18107900 -85387074 - L1M2 LINE L1 -714 5577 5255 1 723 408 333 61 26 chr15 18107926 18108157 -85386817 - L1M2 LINE L1 -932 5211 4973 1 723 7668 43 0 1 chr15 18108163 18109095 -85385879 - L1Md_F3 LINE L1 -17 6567 5637 1 723 255 88 0 0 chr15 18109425 18109459 -85385515 + L1Md_F3 LINE L1 5636 5669 -915 1 723 1155 356 113 18 chr15 18109857 18110644 -85384330 + Lx8 LINE L1 6467 7328 -145 1 723 351 137 0 0 chr15 18111003 18111076 -85383898 + (T)n Simple_repeat Simple_repeat 1 73 0 1 723 1234 178 72 129 chr15 18111395 18111744 -85383230 + ORR1B1 LTR MaLR 58 386 -8 1 723 555 16 0 0 chr15 18111751 18111815 -85383159 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 1 723 26 0 0 0 chr15 18112271 18112297 -85382677 + AT_rich Low_complexity Low_complexity 1 26 0 1 723 746 251 11 21 chr15 18112322 18112513 -85382461 - RLTR42-int LTR ERVK -4123 1399 1211 1 723 553 282 56 19 chr15 18112859 18113072 -85381902 + RMER15 LTR ERVL 352 572 -3 1 723 210 37 0 0 chr15 18113210 18113237 -85381737 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1 723 228 35 0 0 chr15 18113450 18113479 -85381495 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 723 216 289 34 57 chr15 18113983 18114071 -85380903 + B2_Mm1a SINE B2 98 183 -10 1 723 697 337 32 64 chr15 18114246 18114609 -85380365 + MTE2a LTR MaLR 23 391 -28 1 723 243 224 0 0 chr15 18114625 18114674 -85380300 + MTE2a LTR MaLR 331 379 0 1 723 3120 56 2 5 chr15 18115033 18115430 -85379544 + MTA_Mm LTR MaLR 1 396 0 1 723 4027 66 8 50 chr15 18121063 18121665 -85373309 - L1Md_F2 LINE L1 0 6582 6006 1 723 21 0 0 0 chr15 18121975 18121996 -85372978 + AT_rich Low_complexity Low_complexity 1 21 0 1 723 29 0 0 0 chr15 18122164 18122193 -85372781 + AT_rich Low_complexity Low_complexity 1 29 0 1 723 28 0 0 0 chr15 18122312 18122340 -85372634 + AT_rich Low_complexity Low_complexity 1 28 0 1 723 24 85 0 0 chr15 18122403 18122462 -85372512 + AT_rich Low_complexity Low_complexity 1 59 0 1 723 362 117 0 91 chr15 18122565 18122605 -85372369 + HAL1-3A_ME LINE L1 1968 2007 -851 1 723 393 75 0 0 chr15 18122605 18122658 -85372316 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 723 362 117 0 91 chr15 18122658 18122683 -85372291 + HAL1-3A_ME LINE L1 2008 2027 -831 1 723 25 31 0 0 chr15 18122862 18122894 -85372080 + AT_rich Low_complexity Low_complexity 1 32 0 1 723 2603 163 39 34 chr15 18122963 18123604 -85371370 - L1_Mus4 LINE L1 -6 6630 5958 1 723 326 349 158 16 chr15 18124300 18124679 -85370295 - Lx8 LINE L1 -227 7246 6814 1 723 495 378 30 19 chr15 18124730 18124994 -85369980 - Lx8 LINE L1 -784 6689 6423 1 723 1464 266 14 5 chr15 18125166 18125537 -85369437 + Lx7 LINE L1 6888 7261 -435 1 723 474 96 0 0 chr15 18125591 18125664 -85369310 + (T)n Simple_repeat Simple_repeat 1 73 0 1 723 3709 46 0 0 chr15 18125699 18126153 -85368821 - L1Md_T LINE L1 0 6582 6129 1 723 647 281 38 110 chr15 18126498 18126790 -85368184 - RLTR11B LTR ERVK -182 271 1 1 723 207 0 0 0 chr15 18126842 18126865 -85368109 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 1 723 2981 189 46 18 chr15 18126865 18127478 -85367496 - Lx4A LINE L1 -6 7052 6423 1 723 243 0 0 0 chr15 18127567 18127594 -85367380 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 723 189 0 0 0 chr15 18127594 18127614 -85367360 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 723 2594 81 3 0 chr15 18128374 18128719 -85366255 - ORR1A1 LTR MaLR 0 346 1 1 723 5121 38 0 0 chr15 18128789 18129403 -85365571 + L1Md_T LINE L1 5969 6582 0 2 723 26 74 0 0 chr15 18129403 18129457 -85365517 + AT_rich Low_complexity Low_complexity 1 54 0 2 723 456 293 31 148 chr15 18129561 18129757 -85365217 - MTEa LTR MaLR -201 178 6 2 723 22 0 0 0 chr15 18131864 18131886 -85363088 + AT_rich Low_complexity Low_complexity 1 22 0 2 723 1063 76 0 7 chr15 18131937 18132082 -85362892 + B1_Mus1 SINE Alu 4 147 -1 2 723 25 51 0 0 chr15 18132277 18132316 -85362658 + AT_rich Low_complexity Low_complexity 1 39 0 2 723 526 333 53 31 chr15 18132620 18132846 -85362128 + B4A SINE B4 60 290 -2 2 723 270 116 0 0 chr15 18132943 18132986 -85361988 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 723 8083 36 14 1 chr15 18133089 18134382 -85360592 - L1Md_F2 LINE L1 0 6582 5273 2 723 34 0 0 0 chr15 18135819 18135853 -85359121 + AT_rich Low_complexity Low_complexity 1 34 0 2 723 30 0 0 0 chr15 18135882 18135912 -85359062 + AT_rich Low_complexity Low_complexity 1 30 0 2 723 23 86 0 0 chr15 18136909 18136967 -85358007 + AT_rich Low_complexity Low_complexity 1 58 0 2 723 23 68 0 0 chr15 18137130 18137174 -85357800 + AT_rich Low_complexity Low_complexity 1 44 0 2 723 314 282 0 0 chr15 18137415 18137493 -85357481 - ID4_ SINE ID -4 79 2 2 723 216 151 38 0 chr15 18137610 18137663 -85357311 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 723 21 0 0 0 chr15 18137749 18137770 -85357204 + AT_rich Low_complexity Low_complexity 1 21 0 2 723 234 128 0 0 chr15 18137784 18137823 -85357151 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 723 336 64 0 0 chr15 18138291 18138338 -85356636 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 723 24 0 0 0 chr15 18139133 18139157 -85355817 + AT_rich Low_complexity Low_complexity 1 24 0 2 723 235 401 92 49 chr15 18141257 18141585 -85353389 - LTR16B2 LTR ERVL -82 380 39 2 723 1597 61 0 0 chr15 18142041 18142237 -85352737 - L1_Mus1 LINE L1 -199 6368 6173 2 723 899 179 0 6 chr15 18142238 18142418 -85352556 + GA-rich Low_complexity Low_complexity 2 180 0 2 723 675 250 8 0 chr15 18142440 18142572 -85352402 + ETnERV2-int LTR ERVK 7070 7202 -204 2 723 652 307 45 41 chr15 18143325 18143755 -85351219 - RLTR40 LTR ERVK -11 806 286 2 723 261 195 60 24 chr15 18143857 18143941 -85351033 + Lx9 LINE L1 7551 7637 -7 2 723 554 251 36 52 chr15 18143981 18144174 -85350800 - RLTR40 LTR ERVK -609 208 19 2 723 1282 190 107 13 chr15 18144239 18144538 -85350436 - ORR1B2 LTR MaLR -7 360 34 2 723 294 29 0 0 chr15 18144604 18144639 -85350335 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 723 447 63 0 0 chr15 18144955 18145018 -85349956 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 723 479 371 25 10 chr15 18145167 18145363 -85349611 - B4A SINE B4 -8 284 86 2 723 2044 192 133 40 chr15 18146573 18147202 -85347772 - RMER6C LTR ERVK 0 690 3 2 723 25 0 0 0 chr15 18147397 18147422 -85347552 + AT_rich Low_complexity Low_complexity 1 25 0 2 723 1947 254 79 131 chr15 18148427 18148532 -85346442 - RMER1C Other Other -4 1338 1224 2 723 551 15 0 14 chr15 18148532 18148601 -85346373 + (GGA)n Simple_repeat Simple_repeat 2 69 0 2 723 1947 260 78 127 chr15 18148601 18149437 -85345537 - RMER1C Other Other -119 1223 491 2 723 1432 139 8 34 chr15 18149437 18149704 -85345270 - Lx LINE L1 -2 6652 6393 2 723 434 359 60 70 chr15 18149704 18149881 -85345093 - RMER1C Other Other -747 595 411 2 723 898 255 55 12 chr15 18150172 18150426 -85344548 - RMER1C Other Other -1049 293 29 2 723 399 299 9 0 chr15 18150594 18150719 -85344255 - RMER1B Other Other -360 706 518 2 723 310 326 20 98 chr15 18150752 18150905 -85344069 - MLT1A LTR MaLR -214 160 20 2 723 1092 249 54 89 chr15 18151395 18151766 -85343208 - ORR1C2 LTR MaLR -2 382 25 2 723 333 0 0 0 chr15 18151779 18151816 -85343158 + (TC)n Simple_repeat Simple_repeat 2 38 0 2 723 378 0 0 0 chr15 18151819 18151861 -85343113 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 723 551 128 0 68 chr15 18151884 18152001 -85342973 - Lx3A LINE L1 -2 6979 6871 2 723 24 32 0 0 chr15 18152738 18152769 -85342205 + AT_rich Low_complexity Low_complexity 1 31 0 2 723 211 104 42 0 chr15 18153024 18153072 -85341902 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 723 1521 253 174 60 chr15 18155566 18156154 -85338820 + Lx6 LINE L1 6795 7449 -11 2 723 25 0 0 0 chr15 18157093 18157118 -85337856 + AT_rich Low_complexity Low_complexity 1 25 0 2 723 233 333 19 66 chr15 18157132 18157238 -85337736 + MER3 DNA MER1_type 5 105 -104 2 723 23 54 0 0 chr15 18158553 18158590 -85336384 + AT_rich Low_complexity Low_complexity 1 37 0 2 723 21 0 0 0 chr15 18158792 18158813 -85336161 + AT_rich Low_complexity Low_complexity 1 21 0 2 723 531 298 35 40 chr15 18158824 18159023 -85335951 - B3A SINE B2 0 198 1 2 723 317 311 97 12 chr15 18159267 18159514 -85335460 + L1M2 LINE L1 4363 4630 -1513 2 723 561 304 37 37 chr15 18159519 18159707 -85335267 + B3 SINE B2 2 189 -27 2 723 203 133 0 22 chr15 18159848 18159894 -85335080 + T-rich Low_complexity Low_complexity 1 45 0 2 723 343 325 123 12 chr15 18160328 18160571 -85334403 + L1MD3 LINE L1 6778 7047 -948 2 723 182 267 90 39 chr15 18160737 18160815 -85334159 + L4 LINE RTE 249 330 -1699 2 723 406 319 80 40 chr15 18161694 18161844 -85333130 - RSINE1 SINE B4 0 165 10 2 723 238 285 35 117 chr15 18161872 18161893 -85333081 - B2_Mm2 SINE B2 -1 194 172 2 723 406 305 137 0 chr15 18161893 18162083 -85332891 - B3 SINE B2 0 216 1 2 723 238 285 35 117 chr15 18162083 18162102 -85332872 - B2_Mm2 SINE B2 -24 171 158 2 723 459 0 0 0 chr15 18162102 18162153 -85332821 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 723 444 286 35 113 chr15 18162153 18162286 -85332688 - B3A SINE B2 -38 157 34 2 723 1491 265 27 65 chr15 18164016 18164528 -85330446 - MT2A LTR ERVL -13 520 28 2 723 505 186 11 8 chr15 18164622 18164739 -85330235 - MERVL_2A-int LTR ERVL -4598 1163 1064 2 723 367 242 55 0 chr15 18164815 18164906 -85330068 - MERVL_2A-int LTR ERVL -4827 934 839 2 723 28 29 0 0 chr15 18165411 18165446 -85329528 + AT_rich Low_complexity Low_complexity 1 35 0 2 723 1040 158 5 11 chr15 18165749 18165934 -85329040 - B2_Mm2 SINE B2 -10 185 2 2 723 228 67 0 0 chr15 18166119 18166149 -85328825 + (CATA)n Simple_repeat Simple_repeat 2 31 0 2 723 368 330 84 25 chr15 18166938 18167140 -85327834 + Lx8 LINE L1 6930 7143 -330 2 723 585 42 0 0 chr15 18167197 18167269 -85327705 + (GGA)n Simple_repeat Simple_repeat 1 72 0 2 723 310 185 0 28 chr15 18167288 18167366 -85327608 + MT2A LTR ERVL 1 72 -403 2 723 2256 250 76 3 chr15 18167383 18168002 -85326972 + MERVL_2A-int LTR ERVL 113 776 -4985 2 723 2106 21 0 0 chr15 18168012 18168253 -85326721 + L1Md_T LINE L1 5346 5586 -297 2 723 8102 37 16 0 chr15 18168254 18169233 -85325741 + L1Md_T LINE L1 5588 6582 0 2 723 1796 201 22 83 chr15 18169740 18170197 -85324777 + RLTR28 LTR ERVL 72 500 -24 2 723 777 171 36 24 chr15 18170283 18170451 -85324523 + MERVL_2A-int LTR ERVL 1084 1253 -4508 2 723 30217 144 14 48 chr15 18170475 18174030 -85320944 + L1_Mus1 LINE L1 261 3567 -2316 2 723 387 0 0 0 chr15 18174030 18174073 -85320901 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 723 30217 110 5 7 chr15 18174073 18176491 -85318483 + L1_Mus1 LINE L1 3568 5967 -600 2 723 519 74 0 12 chr15 18176491 18176573 -85318401 + L1_Mus2 LINE L1 6486 6566 0 2 723 648 260 138 17 chr15 18176573 18176862 -85318112 + MERVL_2A-int LTR ERVL 1239 1562 -4199 2 723 555 43 0 0 chr15 18176866 18176936 -85318038 + (CA)n Simple_repeat Simple_repeat 1 70 0 2 723 2980 211 65 6 chr15 18176972 18177607 -85317367 + MERVL_2A-int LTR ERVL 1630 2301 -3460 2 723 2503 89 19 11 chr15 18177609 18177900 -85317074 + RLTR8 LTR ERVK 1 296 -69 2 723 4154 50 0 44 chr15 18177900 18178443 -85316531 + MURVY-LTR LTR ERV1 1 519 0 2 723 2503 89 19 11 chr15 18178443 18178513 -85316461 + RLTR8 LTR ERVK 297 365 0 2 723 960 171 0 0 chr15 18178513 18178677 -85316297 + SRV_MM-int LTR ERVK 1 164 -6003 2 723 255 31 0 0 chr15 18178757 18178789 -85316185 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2 723 200 188 29 72 chr15 18178978 18179047 -85315927 + A-rich Low_complexity Low_complexity 1 66 0 2 723 1005 173 168 43 chr15 18179301 18179694 -85315280 + SRV_MM-int LTR ERVK 489 930 -5237 2 723 21 89 0 0 chr15 18179859 18179915 -85315059 + AT_rich Low_complexity Low_complexity 1 56 0 2 723 268 345 50 28 chr15 18180219 18180401 -85314573 + B3A SINE B2 2 187 -11 2 723 23 33 0 0 chr15 18180405 18180435 -85314539 + AT_rich Low_complexity Low_complexity 1 30 0 2 723 409 195 81 0 chr15 18180500 18180623 -85314351 - Lx9 LINE L1 -8 7636 7504 2 723 227 85 32 48 chr15 18180631 18180693 -85314281 + (TTATA)n Simple_repeat Simple_repeat 1 61 0 2 723 39 74 0 0 chr15 18180698 18180779 -85314195 + AT_rich Low_complexity Low_complexity 1 81 0 2 723 423 0 0 0 chr15 18180786 18180833 -85314141 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 723 636 271 65 16 chr15 18180836 18181084 -85313890 - Lx9 LINE L1 -176 7468 7209 2 723 28 29 0 0 chr15 18181117 18181152 -85313822 + AT_rich Low_complexity Low_complexity 1 35 0 2 723 589 293 26 13 chr15 18181264 18181496 -85313478 - Lx9 LINE L1 -161 7483 7249 2 723 29 60 0 15 chr15 18181795 18181842 -85313132 + AT_rich Low_complexity Low_complexity 1 47 0 2 723 1810 125 81 16 chr15 18181842 18182152 -85312822 - Lx LINE L1 -8 6646 6317 2 723 29 60 0 15 chr15 18182152 18182172 -85312802 + AT_rich Low_complexity Low_complexity 1 20 0 2 723 22 0 0 0 chr15 18182999 18183021 -85311953 + AT_rich Low_complexity Low_complexity 1 22 0 2 723 7864 60 0 1 chr15 18183035 18184016 -85310958 - L1_Mus1 LINE L1 -1 6566 5587 2 723 243 217 101 71 chr15 18184089 18184188 -85310786 - L1M3 LINE L1 -269 5920 5819 2 723 258 81 0 0 chr15 18184622 18184659 -85310315 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 723 374 289 68 32 chr15 18184790 18185040 -85309934 - L1M3 LINE L1 -937 5203 4945 2 723 558 315 62 31 chr15 18185335 18185561 -85309413 + B4A SINE B4 4 236 -56 2 723 217 176 17 50 chr15 18185587 18185647 -85309327 + GA-rich Low_complexity Low_complexity 3 60 0 2 723 1894 131 40 22 chr15 18186104 18186233 -85308741 + ORR1A2 LTR MaLR 1 129 -198 2 723 4072 44 0 0 chr15 18186233 18186728 -85308246 - L1Md_F3 LINE L1 -14 6570 6076 2 723 1894 131 40 22 chr15 18186728 18186919 -85308055 + ORR1A2 LTR MaLR 130 327 0 2 723 2983 186 12 28 chr15 18186919 18187488 -85307486 + ORR1A2-int LTR MaLR 1 560 -1403 2 723 2970 120 9 0 chr15 18187481 18187905 -85307069 + MT2B2 LTR ERVL 157 584 0 2 723 21 0 0 0 chr15 18188065 18188086 -85306888 + AT_rich Low_complexity Low_complexity 1 21 0 2 723 387 300 134 45 chr15 18188097 18188782 -85306192 + L1M2 LINE L1 3492 4234 -1906 2 723 334 254 0 0 chr15 18188857 18188928 -85306046 + B3A SINE B2 13 83 -115 3 723 8742 156 27 65 chr15 18188984 18190796 -85304178 - L1_Mm LINE L1 -354 5529 3787 3 723 235 232 0 0 chr15 18190793 18190849 -85304125 + Lx LINE L1 5230 5285 -598 3 723 1047 59 7 0 chr15 18190850 18190985 -85303989 - MTA_Mm LTR MaLR 0 396 261 3 723 2112 81 84 43 chr15 18190987 18191334 -85303640 - RLTR10B2 LTR ERVK 0 365 5 3 723 304 48 0 0 chr15 18191341 18191383 -85303591 - RLTR10B LTR ERVK -250 42 1 3 723 2018 61 0 4 chr15 18191383 18191648 -85303326 - MTA_Mm LTR MaLR -132 264 1 3 723 4505 127 9 34 chr15 18191654 18192670 -85302304 + Lx LINE L1 5289 6276 -378 3 723 262 109 0 0 chr15 18192638 18192684 -85302290 + Lx LINE L1 6602 6647 -7 3 723 21 71 0 0 chr15 18192808 18192850 -85302124 + AT_rich Low_complexity Low_complexity 1 42 0 3 723 249 33 0 0 chr15 18193569 18193599 -85301375 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 723 213 194 53 11 chr15 18193600 18193694 -85301280 + (TTATA)n Simple_repeat Simple_repeat 4 101 0 3 723 411 132 0 0 chr15 18194181 18194249 -85300725 + (CA)n Simple_repeat Simple_repeat 1 68 0 3 723 327 236 269 0 chr15 18194286 18194416 -85300558 + ORR1A2-int LTR MaLR 1005 1169 -340 2 723 407 224 0 0 chr15 18194445 18194521 -85300453 + ORR1A2 LTR MaLR 1 76 -318 2 723 2701 289 72 31 chr15 18194544 18194938 -85300036 + ORR1A2-int LTR MaLR 223 636 -734 2 723 2466 137 9 33 chr15 18194938 18195367 -85299607 + Lx LINE L1 6234 6652 -2 3 723 2701 289 72 31 chr15 18195367 18195953 -85299021 + ORR1A2-int LTR MaLR 637 1243 -127 2 723 1758 108 11 0 chr15 18195953 18196222 -85298752 + L1_Mus4 LINE L1 6364 6635 -1 3 723 32 26 0 0 chr15 18196836 18196875 -85298099 + AT_rich Low_complexity Low_complexity 1 39 0 3 723 35932 49 23 3 chr15 18197124 18202377 -85292597 + L1Md_T LINE L1 136 5589 -297 3 723 8007 53 0 3 chr15 18202377 18203376 -85291598 + L1Md_T LINE L1 5590 6585 0 3 723 1134 68 0 0 chr15 18203390 18203537 -85291437 + B1_Mus1 SINE Alu 2 148 0 3 723 186 43 0 0 chr15 18203537 18203560 -85291414 + (A)n Simple_repeat Simple_repeat 1 23 0 3 723 400 349 13 13 chr15 18204154 18204308 -85290666 + Lx8 LINE L1 6808 6961 -512 3 723 2356 105 37 8 chr15 18204670 18205025 -85289949 + RLTR8 LTR ERVK 1 365 0 3 723 222 37 0 0 chr15 18205107 18205134 -85289840 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 723 21 0 0 0 chr15 18205147 18205168 -85289806 + AT_rich Low_complexity Low_complexity 1 21 0 3 723 225 258 146 61 chr15 18205520 18205685 -85289289 - Zaphod2 DNA Tip100 -2881 643 465 3 723 438 79 0 0 chr15 18207691 18207754 -85287220 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 723 21 0 0 0 chr15 18208469 18208490 -85286484 + AT_rich Low_complexity Low_complexity 1 21 0 3 723 299 236 67 63 chr15 18209045 18209298 -85285676 - Lx7 LINE L1 0 7696 7443 3 723 375 169 0 0 chr15 18209458 18209529 -85285445 + GA-rich Low_complexity Low_complexity 2 72 0 3 723 618 219 0 0 chr15 18209532 18209646 -85285328 - Lx7 LINE L1 -365 7331 7218 3 723 810 246 117 17 chr15 18209709 18210007 -85284967 - Lx7 LINE L1 -1196 6500 6173 3 723 1135 248 56 7 chr15 18209996 18210280 -85284694 - Lx2B LINE L1 -3 6997 6700 3 723 230 284 33 22 chr15 18210287 18210377 -85284597 - Lx7 LINE L1 -1545 6151 6061 3 723 28 48 0 0 chr15 18211774 18211816 -85283158 + AT_rich Low_complexity Low_complexity 1 42 0 3 723 22 56 0 0 chr15 18212388 18212424 -85282550 + AT_rich Low_complexity Low_complexity 1 36 0 3 723 322 312 27 15 chr15 18213180 18213421 -85281553 - L1M2 LINE L1 -587 5713 5468 3 723 710 342 26 12 chr15 18213563 18213863 -85281111 - MTE2b LTR MaLR -88 291 1 3 723 32 0 0 0 chr15 18213924 18213956 -85281018 + AT_rich Low_complexity Low_complexity 1 32 0 3 723 919 365 77 24 chr15 18214008 18214463 -85280511 - MTE-int LTR MaLR -268 1312 834 3 723 687 313 75 5 chr15 18214929 18215141 -85279833 - MTE-int LTR MaLR -776 804 578 3 723 6026 71 7 12 chr15 18215154 18215964 -85279010 - L1_Mus1 LINE L1 -1 6566 5761 3 723 930 350 33 111 chr15 18215964 18216577 -85278397 - MTE-int LTR MaLR -978 602 38 3 90 1122 275 162 40 chr15 18218625 18219066 -85275908 + MT2A LTR ERVL 1 499 -34 3 724 360 64 0 0 chr15 18219066 18219113 -85275861 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 724 1122 275 162 40 chr15 18219113 18219141 -85275833 + MT2A LTR ERVL 500 527 -6 3 724 211 28 27 27 chr15 18219141 18219178 -85275796 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 3 724 29 47 0 0 chr15 18219665 18219708 -85275266 + AT_rich Low_complexity Low_complexity 1 43 0 3 724 601 277 0 0 chr15 18219830 18219978 -85274996 + B1_Mur4 SINE Alu 1 148 -2 3 724 243 255 0 0 chr15 18219981 18220032 -85274942 + A-rich Low_complexity Low_complexity 2 52 0 3 724 440 297 58 0 chr15 18220366 18220504 -85274470 + B1_Mus2 SINE Alu 2 147 0 3 724 28 0 0 0 chr15 18220504 18220532 -85274442 + AT_rich Low_complexity Low_complexity 1 28 0 3 724 681 300 94 30 chr15 18220674 18221142 -85273832 + Lx8 LINE L1 5674 6171 -1302 3 724 256 343 58 46 chr15 18221152 18221326 -85273648 + Lx8 LINE L1 6416 6591 -882 3 724 25 0 0 0 chr15 18221992 18222017 -85272957 + AT_rich Low_complexity Low_complexity 1 25 0 3 724 1963 217 131 82 chr15 18223524 18224111 -85270863 - RLTR18 LTR ERVK 0 616 1 3 724 397 82 14 0 chr15 18224317 18224390 -85270584 + L1_Mus3 LINE L1 6558 6631 -7 3 724 225 0 0 0 chr15 18224632 18224657 -85270317 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 3 724 360 321 90 90 chr15 18224698 18225075 -85269899 + L1M4 LINE L1 3937 4336 -1810 3 724 2528 44 89 0 chr15 18225075 18225391 -85269583 - ORR1A1 LTR MaLR -2 344 1 3 724 360 321 90 90 chr15 18225391 18225526 -85269448 + L1M4 LINE L1 4337 4449 -1697 3 724 253 250 97 9 chr15 18225663 18225776 -85269198 + L1M4 LINE L1 4591 4713 -1433 3 724 725 140 9 0 chr15 18225794 18225908 -85269066 + Lx3A LINE L1 6328 6442 -539 3 724 213 277 0 0 chr15 18225938 18225985 -85268989 + CT-rich Low_complexity Low_complexity 2 48 0 3 724 436 308 22 108 chr15 18226260 18226482 -85268492 - MTEa LTR MaLR -174 205 3 3 724 305 194 43 0 chr15 18226930 18227019 -85267955 + L1ME1 LINE L1 5864 5955 -219 3 724 22 70 0 0 chr15 18227193 18227236 -85267738 + AT_rich Low_complexity Low_complexity 1 43 0 3 724 235 333 94 31 chr15 18227328 18227455 -85267519 + MLT1D LTR MaLR 46 180 -325 3 724 1244 294 44 37 chr15 18227927 18228336 -85266638 + RMER15 LTR ERVL 128 539 -36 3 724 1496 207 78 21 chr15 18228490 18228825 -85266149 + ORR1B2 LTR MaLR 6 359 -8 3 724 491 223 96 67 chr15 18228919 18229097 -85265877 - RLTR18B LTR ERVK -69 443 261 3 724 7492 75 6 6 chr15 18229118 18230186 -85264788 + L1_Mus2 LINE L1 5497 6565 -1 3 724 462 307 38 54 chr15 18230331 18230517 -85264457 - RLTR18B LTR ERVK -329 183 1 3 724 260 239 57 0 chr15 18230522 18230610 -85264364 - Lx9 LINE L1 -26 7618 7526 3 724 26 64 0 0 chr15 18231344 18231391 -85263583 + AT_rich Low_complexity Low_complexity 1 47 0 3 724 21 36 0 0 chr15 18232712 18232740 -85262234 + AT_rich Low_complexity Low_complexity 1 28 0 3 724 465 324 50 44 chr15 18233070 18233251 -85261723 - B3A SINE B2 -16 182 1 3 724 327 25 0 0 chr15 18233474 18233514 -85261460 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 3 724 23 0 0 0 chr15 18235894 18235917 -85259057 + AT_rich Low_complexity Low_complexity 1 23 0 3 724 588 336 64 53 chr15 18235984 18236248 -85258726 + B4A SINE B4 6 272 -20 3 724 432 0 0 0 chr15 18236257 18236305 -85258669 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 724 938 84 14 34 chr15 18236435 18236582 -85258392 - L1_Mur2 LINE L1 -2393 3484 3341 3 724 1616 217 20 31 chr15 18236597 18236987 -85257987 + Lx2B LINE L1 6501 6886 -114 3 724 690 226 7 0 chr15 18237042 18237188 -85257786 - Lx9 LINE L1 -703 6941 6795 3 724 1675 257 57 71 chr15 18237207 18237844 -85257130 - RLTR40 LTR ERVK -35 782 155 3 724 1746 240 64 5 chr15 18237911 18238334 -85256640 - Lx9 LINE L1 -845 6799 6352 3 724 2720 50 18 0 chr15 18239456 18239796 -85255178 - ORR1A0 LTR MaLR 0 346 1 3 724 13328 64 19 1 chr15 18239796 18241555 -85253419 - ORR1A0-int LTR MaLR 0 1792 1 3 724 2827 44 6 0 chr15 18241555 18241899 -85253075 - ORR1A0 LTR MaLR 0 346 1 3 724 2356 133 77 10 chr15 18242018 18242302 -85252672 + Lx LINE L1 6221 6518 -136 3 724 315 49 0 0 chr15 18242302 18242343 -85252631 + (TGGG)n Simple_repeat Simple_repeat 1 41 0 3 724 2356 133 77 10 chr15 18242343 18242459 -85252515 + Lx LINE L1 6519 6646 -8 3 724 29 60 0 0 chr15 18242489 18242539 -85252435 + AT_rich Low_complexity Low_complexity 1 50 0 3 724 204 97 0 0 chr15 18242955 18242986 -85251988 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 3 724 657 11 11 0 chr15 18243353 18243440 -85251534 + L1Md_T LINE L1 6495 6582 0 3 724 456 19 0 0 chr15 18243576 18243629 -85251345 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 724 193 167 37 0 chr15 18244051 18244105 -85250869 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 724 35437 34 0 0 chr15 18244279 18249731 -85245243 + L1Md_T LINE L1 41 5589 -297 3 724 8978 5 0 0 chr15 18249731 18250783 -85244191 + L1Md_T LINE L1 5590 6585 0 3 724 286 266 13 0 chr15 18251032 18251111 -85243863 + Lx7 LINE L1 7180 7259 -437 3 724 221 119 24 0 chr15 18251190 18251232 -85243742 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 3 724 21 0 0 0 chr15 18251327 18251348 -85243626 + AT_rich Low_complexity Low_complexity 1 21 0 3 724 6601 108 6 42 chr15 18251366 18252472 -85242502 + L1_Mur1 LINE L1 4287 5353 -533 3 724 11102 52 0 0 chr15 18252487 18253867 -85241107 + Lx3_Mus LINE L1 4208 5586 -297 3 724 7735 46 23 0 chr15 18253867 18254827 -85240147 + L1Md_F3 LINE L1 5588 6569 -15 3 724 8889 127 28 61 chr15 18254827 18255379 -85239595 + Lx3_Mus LINE L1 5454 5908 -1101 3 724 951 115 0 0 chr15 18255379 18255527 -85239447 + (GAAA)n Simple_repeat Simple_repeat 2 149 0 3 724 8889 105 47 4 chr15 18255527 18256577 -85238397 + Lx3_Mus LINE L1 5909 7000 -9 3 724 1042 71 0 60 chr15 18256605 18256755 -85238219 + B1_Mus1 SINE Alu 2 142 -6 3 724 24 53 0 0 chr15 18257635 18257673 -85237301 + AT_rich Low_complexity Low_complexity 1 38 0 3 724 25 75 0 0 chr15 18257718 18257771 -85237203 + AT_rich Low_complexity Low_complexity 1 53 0 3 724 1349 281 45 7 chr15 18257879 18258306 -85236668 - Lx7 LINE L1 -314 7382 6940 3 724 258 361 46 23 chr15 18258306 18258479 -85236495 + MLT2C1 LTR ERVL 136 312 -85 3 724 426 349 12 0 chr15 18258679 18258845 -85236129 + Lx8 LINE L1 6901 7068 -405 3 724 437 0 0 19 chr15 18259006 18259060 -85235914 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 3 724 879 19 0 0 chr15 18259106 18259211 -85235763 + (TG)n Simple_repeat Simple_repeat 2 106 0 3 724 772 238 214 22 chr15 18259213 18259484 -85235490 - RMER20B LTR ERVK -289 338 16 3 724 241 263 40 0 chr15 18259496 18259572 -85235402 + Lx8 LINE L1 7259 7337 -136 3 724 3683 150 12 6 chr15 18260015 18260659 -85234315 - Lx3A LINE L1 0 6981 6334 3 724 357 24 0 0 chr15 18260659 18260701 -85234273 + Lx3C LINE L1 6265 6306 -670 3 724 321 245 0 102 chr15 18262201 18262319 -85232655 - MTEb LTR MaLR -12 367 262 3 724 513 266 19 0 chr15 18262392 18262546 -85232428 - Lx9 LINE L1 -851 6793 6637 3 724 2531 100 5 18 chr15 18263576 18263963 -85231011 + Lx LINE L1 6267 6648 -6 3 724 863 243 48 8 chr15 18264248 18264497 -85230477 + Lx9 LINE L1 977 1235 -6373 4 724 509 301 15 7 chr15 18264539 18264676 -85230298 + B1_Mur4 SINE Alu 1 138 -12 4 724 701 288 77 40 chr15 18264726 18265202 -85229772 + Lx9 LINE L1 5590 6117 -1527 4 724 210 71 0 0 chr15 18265279 18265307 -85229667 + (TA)n Simple_repeat Simple_repeat 1 28 0 4 724 8152 175 48 62 chr15 18265401 18267214 -85227760 + ORR1B1-int LTR MaLR 176 1963 0 4 724 1531 233 20 31 chr15 18267220 18267575 -85227399 + ORR1B1 LTR MaLR 40 390 -4 4 724 268 185 12 36 chr15 18267580 18267664 -85227310 + (TA)n Simple_repeat Simple_repeat 2 83 0 4 724 266 262 33 65 chr15 18267667 18267730 -85227244 + Lx9 LINE L1 7458 7517 -127 4 724 441 0 0 0 chr15 18267730 18267779 -85227195 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 4 724 266 262 33 65 chr15 18267779 18267899 -85227075 + Lx9 LINE L1 7518 7634 -10 4 724 2002 127 34 37 chr15 18268051 18268404 -85226570 - MTB_Mm LTR MaLR -55 352 1 4 724 723 42 0 0 chr15 18268541 18268636 -85226338 + (TG)n Simple_repeat Simple_repeat 1 95 0 4 724 318 26 0 0 chr15 18268636 18268675 -85226299 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 4 724 193 183 33 0 chr15 18268887 18268947 -85226027 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 724 885 123 26 6 chr15 18270216 18270372 -85224602 + Lx LINE L1 6490 6648 -6 4 724 783 104 0 0 chr15 18271253 18271368 -85223606 + (CA)n Simple_repeat Simple_repeat 2 116 0 4 724 561 30 0 0 chr15 18271402 18271469 -85223505 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 724 21 0 0 0 chr15 18272063 18272084 -85222890 + AT_rich Low_complexity Low_complexity 1 21 0 4 724 2429 114 3 0 chr15 18273102 18273460 -85221514 + L1_Mus4 LINE L1 6268 6626 -10 4 724 258 105 0 0 chr15 18275125 18275163 -85219811 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 724 396 179 0 0 chr15 18275163 18275241 -85219733 + (TG)n Simple_repeat Simple_repeat 2 79 0 4 724 652 118 13 87 chr15 18275843 18275992 -85218982 - Lx LINE L1 -4 6650 6513 4 724 561 65 70 61 chr15 18276301 18276415 -85218559 - L1_Mus3 LINE L1 -7 6631 6517 4 724 535 329 61 78 chr15 18276607 18277003 -85217971 - Charlie1 DNA MER1_type -2346 435 47 4 724 21 0 0 0 chr15 18277235 18277256 -85217718 + AT_rich Low_complexity Low_complexity 1 21 0 4 724 1543 213 32 24 chr15 18277454 18277825 -85217149 - ORR1D1 LTR MaLR 0 374 1 4 724 343 268 74 61 chr15 18277934 18278097 -85216877 - Lx9 LINE L1 -1634 6010 5846 4 724 331 310 61 34 chr15 18278089 18278236 -85216738 + Lx8 LINE L1 6325 6475 -998 4 724 4193 78 7 2 chr15 18278262 18278813 -85216161 + L1_Mus1 LINE L1 5966 6519 -48 4 724 5077 30 2 2 chr15 18278813 18279415 -85215559 - L1Md_F3 LINE L1 0 6584 5983 4 724 965 41 0 0 chr15 18279415 18279537 -85215437 + L1Md_F3 LINE L1 5857 5978 -606 4 724 395 95 0 0 chr15 18279537 18279600 -85215374 + L1_Mus1 LINE L1 6505 6567 0 4 724 267 330 36 44 chr15 18279809 18280004 -85214970 + Lx9 LINE L1 7165 7329 -315 4 724 401 0 0 20 chr15 18280117 18280167 -85214807 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 4 724 21 0 0 0 chr15 18280168 18280189 -85214785 + AT_rich Low_complexity Low_complexity 1 21 0 4 724 25 90 0 0 chr15 18280221 18280288 -85214686 + AT_rich Low_complexity Low_complexity 1 67 0 4 724 1618 241 25 83 chr15 18280587 18281153 -85213821 - MT2A LTR ERVL 0 533 1 4 724 29 28 0 0 chr15 18281202 18281238 -85213736 + AT_rich Low_complexity Low_complexity 1 36 0 4 724 425 319 52 7 chr15 18281238 18281374 -85213600 - RSINE1 SINE B4 -21 144 3 4 724 26 30 0 0 chr15 18281384 18281417 -85213557 + AT_rich Low_complexity Low_complexity 1 33 0 4 724 426 346 84 46 chr15 18282556 18282841 -85212133 + LTR52 LTR ERVL 5 300 -121 4 724 228 272 0 80 chr15 18282989 18283089 -85211885 - MLT1A1 LTR MaLR -3 405 314 4 724 540 0 0 0 chr15 18283299 18283359 -85211615 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 4 724 4042 132 21 8 chr15 18283802 18284467 -85210507 - L1_Mm LINE L1 -396 5487 4814 4 724 32 81 0 0 chr15 18284562 18284636 -85210338 + AT_rich Low_complexity Low_complexity 1 74 0 4 724 8060 52 2 0 chr15 18284636 18285744 -85209230 - L1Md_F2 LINE L1 0 6582 5473 4 724 452 205 0 0 chr15 18285831 18285914 -85209060 + RLTR23 LTR ERV1 8 90 -340 4 724 22 56 0 0 chr15 18286808 18286844 -85208130 + AT_rich Low_complexity Low_complexity 1 36 0 4 724 195 193 48 81 chr15 18286893 18286955 -85208019 + L3 LINE CR1 845 904 -3585 4 724 4520 114 7 9 chr15 18287187 18287879 -85207095 - Lx3_Mus LINE L1 -4 7005 6315 4 724 4249 137 32 18 chr15 18287879 18288601 -85206373 + Lx3_Mus LINE L1 5589 6320 -689 4 724 1216 281 80 112 chr15 18288722 18289496 -85205478 + RLTR40 LTR ERVK 1 749 -68 4 724 27 29 0 0 chr15 18289597 18289631 -85205343 + AT_rich Low_complexity Low_complexity 1 34 0 4 724 243 0 0 0 chr15 18290735 18290762 -85204212 + (A)n Simple_repeat Simple_repeat 1 27 0 4 724 5812 249 83 26 chr15 18292171 18293187 -85201787 + Lx6 LINE L1 5674 6738 -722 4 724 180 0 0 0 chr15 18293187 18293207 -85201767 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 4 724 5812 249 83 26 chr15 18293207 18293824 -85201150 + Lx6 LINE L1 6739 7400 -60 4 724 423 351 120 9 chr15 18294664 18294989 -85199985 - Lx8 LINE L1 -143 7330 6970 4 724 433 303 49 38 chr15 18294991 18295176 -85199798 + Lx8 LINE L1 6776 6962 -511 4 724 21 57 0 0 chr15 18295400 18295435 -85199539 + AT_rich Low_complexity Low_complexity 1 35 0 4 724 266 247 11 0 chr15 18295569 18295662 -85199312 + (TG)n Simple_repeat Simple_repeat 1 94 0 4 724 438 348 101 34 chr15 18295685 18295953 -85199021 - B4A SINE B4 0 292 7 4 724 21 71 0 0 chr15 18296604 18296646 -85198328 + AT_rich Low_complexity Low_complexity 1 42 0 4 724 1652 214 32 23 chr15 18297015 18297360 -85197614 - ORR1B2 LTR MaLR -15 352 5 4 724 649 247 67 31 chr15 18298169 18298424 -85196550 + Lx3C LINE L1 866 1129 -5855 4 724 458 75 0 15 chr15 18298462 18298530 -85196444 + (GA)n Simple_repeat Simple_repeat 2 68 0 4 724 29802 116 15 6 chr15 18298538 18304658 -85190316 + L1_Mus1 LINE L1 387 6566 -1 4 724 1015 134 0 11 chr15 18304664 18304845 -85190129 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 4 724 360 0 0 0 chr15 18304853 18304893 -85190081 + (GAAA)n Simple_repeat Simple_repeat 1 40 0 4 724 1833 183 12 7 chr15 18304901 18305330 -85189644 + Lx3C LINE L1 2861 3291 -2586 4 724 6330 164 52 4 chr15 18305308 18306229 -85188745 + Lx3C LINE L1 4986 5937 -1039 4 724 203 0 0 36 chr15 18306229 18306257 -85188717 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 4 724 1126 64 0 0 chr15 18306258 18306399 -85188575 - B1_Mm SINE Alu -6 141 1 4 724 6330 204 42 21 chr15 18306399 18307406 -85187568 + Lx3C LINE L1 5938 6973 -3 4 724 23 0 0 0 chr15 18307905 18307928 -85187046 + AT_rich Low_complexity Low_complexity 1 23 0 4 724 398 185 16 25 chr15 18308314 18308436 -85186538 + CT-rich Low_complexity Low_complexity 1 121 0 4 724 253 359 26 78 chr15 18308959 18309074 -85185900 - PB1D7 SINE Alu -11 109 1 4 724 28 0 0 0 chr15 18309489 18309517 -85185457 + AT_rich Low_complexity Low_complexity 1 28 0 4 724 593 310 45 11 chr15 18310274 18310450 -85184524 + B3 SINE B2 10 191 -25 4 724 1538 233 54 35 chr15 18310458 18310712 -85184262 - RMER1A Other Other -7 1023 757 4 724 2884 35 6 3 chr15 18310712 18311057 -85183917 - ORR1A0 LTR MaLR 0 346 1 4 724 1538 233 54 35 chr15 18311057 18311229 -85183745 - RMER1A Other Other -274 756 589 4 724 2888 268 45 86 chr15 18311986 18312968 -85182006 - Lx6 LINE L1 -1 7459 6518 4 724 283 323 20 40 chr15 18313610 18313710 -85181264 - B3 SINE B2 -37 179 82 4 724 360 0 0 0 chr15 18314840 18314880 -85180094 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 4 724 569 136 77 135 chr15 18314880 18315040 -85179934 - Lx3C LINE L1 -15 6961 6810 4 724 324 258 21 36 chr15 18315561 18315901 -85179073 + GA-rich Low_complexity Low_complexity 1 334 0 4 724 582 251 182 20 chr15 18316004 18316207 -85178767 + Lx7 LINE L1 7172 7407 -289 4 724 317 93 19 0 chr15 18316226 18316280 -85178694 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 724 21 0 0 0 chr15 18316841 18316862 -85178112 + AT_rich Low_complexity Low_complexity 1 21 0 4 724 287 250 29 0 chr15 18317884 18317952 -85177022 + ID2 SINE ID 4 73 -10 4 724 2325 138 8 3 chr15 18318895 18319274 -85175700 + L1_Mus4 LINE L1 6253 6633 -3 4 724 599 288 128 77 chr15 18320177 18320530 -85174444 - MTD LTR MaLR -17 402 9 4 724 662 0 13 0 chr15 18320845 18320923 -85174051 + (TC)n Simple_repeat Simple_repeat 2 80 0 4 724 410 53 18 0 chr15 18320923 18320980 -85173994 + (TTCC)n Simple_repeat Simple_repeat 2 59 0 4 724 808 278 134 24 chr15 18321010 18321345 -85173629 - ORR1D1 LTR MaLR 0 374 3 4 724 212 154 77 0 chr15 18322290 18322355 -85172619 + T-rich Low_complexity Low_complexity 3 72 0 4 724 259 203 0 0 chr15 18322368 18322427 -85172547 - Lx6 LINE L1 0 7460 7402 4 724 213 39 0 0 chr15 18322916 18322942 -85172032 + (CAA)n Simple_repeat Simple_repeat 1 26 0 4 724 359 211 0 0 chr15 18324787 18324858 -85170116 + Lx2 LINE L1 6820 6890 -107 4 724 2121 114 7 0 chr15 18325841 18326148 -85168826 + RLTR27 LTR ERVK 1 309 0 4 724 21 0 0 0 chr15 18326629 18326650 -85168324 + AT_rich Low_complexity Low_complexity 1 21 0 4 724 281 68 23 0 chr15 18326920 18326964 -85168010 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 4 724 1992 133 12 19 chr15 18327528 18327850 -85167124 + Lx3_Mus LINE L1 6690 7009 0 4 724 31 0 0 0 chr15 18327850 18327881 -85167093 + AT_rich Low_complexity Low_complexity 1 31 0 4 724 209 286 136 51 chr15 18329310 18329487 -85165487 + MIR SINE MIR 57 248 -14 4 724 339 85 0 0 chr15 18331313 18331360 -85163614 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 724 494 16 16 0 chr15 18331360 18331422 -85163552 + (GA)n Simple_repeat Simple_repeat 2 65 0 4 724 276 30 0 0 chr15 18331575 18331608 -85163366 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 724 322 303 0 0 chr15 18332247 18332336 -85162638 + PB1D10 SINE Alu 27 115 -2 4 724 5422 95 80 22 chr15 18332472 18334040 -85160934 - L1VL2 LINE L1 -1779 1836 177 4 724 504 261 45 30 chr15 18334078 18334212 -85160762 - B1_Mus2 SINE Alu 0 147 12 4 724 328 290 0 20 chr15 18334218 18334320 -85160654 - MTD LTR MaLR -311 108 9 4 724 33251 72 16 26 chr15 18334693 18336336 -85158638 - L1Md_F2 LINE L1 0 6585 4936 5 724 227 153 62 92 chr15 18336336 18336401 -85158573 + RMER20A LTR ERVK 186 248 -268 5 724 33251 72 16 26 chr15 18336401 18340751 -85154223 - L1Md_F2 LINE L1 0 4935 563 5 724 440 105 13 0 chr15 18340962 18341038 -85153936 + (CA)n Simple_repeat Simple_repeat 2 78 0 5 724 244 356 0 0 chr15 18341071 18341144 -85153830 + Lx8 LINE L1 7175 7247 -226 5 724 585 51 0 0 chr15 18341148 18341227 -85153747 + L1Md_A LINE L1 6504 6582 0 5 724 2851 147 21 0 chr15 18341314 18341789 -85153185 - Lx LINE L1 -12 6642 6158 5 724 22 35 0 0 chr15 18342303 18342332 -85152642 + AT_rich Low_complexity Low_complexity 1 29 0 5 724 983 299 9 37 chr15 18342369 18342695 -85152279 + ORR1D2-int LTR MaLR 197 513 -857 5 724 550 241 0 0 chr15 18342725 18342837 -85152137 + MYSERV-int LTR ERVK 3937 4048 -2502 5 724 1318 321 83 89 chr15 18343078 18343905 -85151069 + ORR1D2-int LTR MaLR 532 1353 -17 5 724 297 385 20 65 chr15 18343938 18344091 -85150883 + ORR1D2 LTR MaLR 11 156 -214 5 724 1419 231 93 37 chr15 18344104 18344482 -85150492 + RMER4B LTR ERVK 21 419 -166 5 724 353 224 91 10 chr15 18344516 18344615 -85150359 + RMER4B LTR ERVK 479 585 0 5 724 497 283 96 35 chr15 18344616 18344814 -85150160 + ORR1D2 LTR MaLR 153 362 -8 5 724 245 118 20 0 chr15 18346860 18346911 -85148063 + (GA)n Simple_repeat Simple_repeat 2 53 0 5 724 1486 81 45 0 chr15 18347124 18347347 -85147627 - L1_Mus3 LINE L1 -7 6631 6399 5 724 355 195 26 3 chr15 18347384 18347511 -85147463 + Lx9 LINE L1 5746 5910 -1734 5 724 619 277 157 46 chr15 18347530 18347836 -85147138 + Lx9 LINE L1 6974 7313 -331 5 724 2085 115 9 3 chr15 18347855 18348177 -85146797 - Lx LINE L1 -1 6653 6330 5 724 423 335 41 31 chr15 18348356 18348550 -85146424 + B3A SINE B2 2 197 -1 5 724 327 25 0 0 chr15 18348896 18348936 -85146038 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 725 808 185 0 0 chr15 18350148 18350283 -85144691 - Lx2 LINE L1 -334 6663 6529 5 725 857 159 59 0 chr15 18350283 18350453 -85144521 + Lx2 LINE L1 6818 6997 0 5 725 219 36 0 0 chr15 18350602 18350630 -85144344 + (GA)n Simple_repeat Simple_repeat 2 29 0 5 725 23 0 0 0 chr15 18350856 18350879 -85144095 + AT_rich Low_complexity Low_complexity 1 23 0 5 725 246 250 0 0 chr15 18351064 18351124 -85143850 - L1M2 LINE L1 -2146 3997 3938 5 725 304 311 185 14 chr15 18351481 18351703 -85143271 - L1M2 LINE L1 -2565 3578 3319 5 725 471 322 50 24 chr15 18351712 18352090 -85142884 + L1MA9 LINE L1 4534 4921 -1219 5 725 23 0 0 0 chr15 18352104 18352127 -85142847 + AT_rich Low_complexity Low_complexity 1 23 0 5 725 337 383 34 11 chr15 18352224 18352401 -85142573 + L1MA9 LINE L1 5118 5298 -845 5 725 1643 33 81 0 chr15 18352529 18352739 -85142235 + L1Md_F2 LINE L1 6356 6582 0 5 725 32 57 0 0 chr15 18352808 18352861 -85142113 + AT_rich Low_complexity Low_complexity 1 53 0 5 725 7280 80 7 9 chr15 18352890 18353578 -85141396 - L1Md_F2 LINE L1 -8 6574 5888 5 725 5816 92 19 93 chr15 18353578 18354541 -85140433 + RLTR13B1 LTR ERVK 1 891 -2 5 725 29013 85 42 9 chr15 18354541 18355178 -85139796 - L1Md_F2 LINE L1 -695 5887 5251 5 725 180 0 0 0 chr15 18355178 18355198 -85139776 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 725 29013 94 75 9 chr15 18355198 18359604 -85135370 - L1Md_F2 LINE L1 -633 5250 509 5 725 361 316 39 11 chr15 18359655 18359834 -85135140 + L1MA9 LINE L1 5491 5674 -515 5 725 231 286 95 50 chr15 18359855 18360076 -85134898 + L1MA9 LINE L1 5748 5978 -334 5 725 186 98 0 56 chr15 18361192 18361246 -85133728 + T-rich Low_complexity Low_complexity 4 54 0 5 725 1045 116 0 0 chr15 18361298 18361445 -85133529 - B1_Mus1 SINE Alu 0 148 2 5 725 545 321 25 59 chr15 18362024 18362226 -85132748 + B3A SINE B2 4 198 0 5 725 203 88 0 29 chr15 18362235 18362270 -85132704 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 5 725 682 349 70 6 chr15 18364041 18364433 -85130541 - LTR86A2 LTR ERVL -76 437 1 5 725 2544 50 12 124 chr15 18365379 18365790 -85129184 + RLTR10B2 LTR ERVK 1 365 0 5 725 207 344 23 60 chr15 18368198 18368331 -85126643 - L3 LINE CR1 -460 4029 3902 5 725 859 234 124 63 chr15 18369052 18369399 -85125575 - RLTR9A LTR ERVK 0 368 1 5 725 1746 228 87 118 chr15 18369674 18370304 -85124670 + RMER19C LTR ERVK 1 611 0 5 725 272 53 38 62 chr15 18370633 18370713 -85124261 + (TTTG)n Simple_repeat Simple_repeat 2 79 0 5 725 1225 73 6 11 chr15 18371500 18371679 -85123295 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 5 725 213 245 19 19 chr15 18372280 18372334 -85122640 - L3b LINE CR1 -236 246 193 5 725 6987 80 5 21 chr15 18373442 18374409 -85120565 - L1_Mus2 LINE L1 0 6566 5615 5 725 692 204 79 11 chr15 18374406 18374584 -85120390 - Lx3C LINE L1 -5 6971 6782 5 725 2016 129 3 10 chr15 18374584 18374897 -85120077 + RLTR10E LTR ERVK 1 311 0 5 725 1272 73 84 17 chr15 18374899 18375103 -85119871 + RLTR10-int LTR ERVK 3 270 -7311 5 725 367 87 64 46 chr15 18375200 18375309 -85119665 + GA-rich Low_complexity Low_complexity 4 114 0 5 725 320 133 0 0 chr15 18375309 18375354 -85119620 + IAPEY3-int LTR ERVK 93 137 -6405 5 725 2802 59 0 0 chr15 18375357 18375698 -85119276 + IAPEY3-int LTR ERVK 652 992 -995 5 725 508 315 35 45 chr15 18375723 18376122 -85118852 + IAPEY3-int LTR ERVK 1172 1566 -6015 5 725 293 182 36 0 chr15 18376139 18376194 -85118780 + IAP-d-int LTR ERVK 447 503 -6039 5 725 1469 112 112 0 chr15 18376194 18376418 -85118556 + IAP-d-int LTR ERVK 5007 5255 -1287 5 725 4151 124 9 1 chr15 18376418 18377100 -85117874 + IAPEY3-int LTR ERVK 6965 7680 0 5 725 247 330 122 36 chr15 18377659 18378133 -85116841 + L1M5 LINE L1 5388 5902 -277 5 725 310 302 61 6 chr15 18378132 18378312 -85116662 + L1MC LINE L1 3725 3914 -2232 5 725 850 276 92 29 chr15 18378522 18378794 -85116180 + RMER1B Other Other 92 380 -686 5 725 2458 269 37 32 chr15 18378841 18379815 -85115159 + RMER1B Other Other 81 1050 -16 5 725 912 286 59 25 chr15 18379950 18380071 -85114903 + RMER6C LTR ERVK 333 455 -265 5 725 724 128 7 22 chr15 18380071 18380207 -85114767 + Lx LINE L1 6511 6644 -10 5 725 912 185 38 72 chr15 18380207 18380234 -85114740 + RMER6C LTR ERVK 409 432 -324 5 725 1575 26 0 10 chr15 18380234 18380430 -85114544 + L1Md_F2 LINE L1 6375 6568 -14 5 725 1020 111 0 0 chr15 18380434 18380587 -85114387 + (GAAA)n Simple_repeat Simple_repeat 2 154 0 5 725 1131 209 0 0 chr15 18380587 18380817 -85114157 + RMER6C LTR ERVK 461 690 0 5 725 1143 278 172 98 chr15 18381220 18381842 -85113132 - Lx6 LINE L1 -28 7432 6765 5 725 1393 221 54 86 chr15 18381842 18382214 -85112760 - ORR1B1 LTR MaLR 0 394 35 5 725 253 242 30 0 chr15 18382329 18382395 -85112579 - Lx5 LINE L1 -598 6452 6385 5 725 429 292 88 94 chr15 18382399 18382717 -85112257 + RLTR18B LTR ERVK 5 320 -296 5 725 2059 67 4 0 chr15 18382814 18383083 -85111891 - L1_Mus1 LINE L1 0 6567 6298 5 725 3618 74 0 4 chr15 18383083 18383557 -85111417 + L1Md_F2 LINE L1 5820 6291 -291 5 725 583 299 44 79 chr15 18383561 18383842 -85111132 + RLTR18B LTR ERVK 237 608 -8 5 725 2498 239 71 8 chr15 18383852 18384838 -85110136 - Lx5 LINE L1 -660 6390 5330 5 725 1134 208 34 7 chr15 18384837 18385132 -85109842 + L1_Mur3 LINE L1 2800 3102 -2778 5 725 3808 99 30 9 chr15 18385567 18386126 -85108848 + Lx LINE L1 6080 6650 -4 5 725 260 0 57 0 chr15 18386330 18386365 -85108609 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 5 725 446 341 37 139 chr15 18386392 18386637 -85108337 + B4 SINE B4 43 262 -30 5 725 358 116 0 42 chr15 18386640 18386712 -85108262 + C-rich Low_complexity Low_complexity 6 74 0 5 725 429 204 0 28 chr15 18386997 18387103 -85107871 - RMER1B Other Other -24 1042 940 5 725 1392 234 71 24 chr15 18387141 18387650 -85107324 - RMER1B Other Other -253 813 264 5 725 1111 326 136 14 chr15 18387872 18388366 -85106608 + MTE-int LTR MaLR 982 1535 -45 5 725 2191 179 8 26 chr15 18388369 18388838 -85106136 - Lx5 LINE L1 -2452 3425 2965 5 725 1145 62 7 0 chr15 18388846 18388991 -85105983 - B1_Mus2 SINE Alu 0 147 2 5 725 1062 56 14 0 chr15 18389078 18389221 -85105753 + B1_Mus2 SINE Alu 3 147 0 5 725 354 89 38 38 chr15 18389225 18389330 -85105644 + A-rich Low_complexity Low_complexity 4 108 0 5 725 1316 239 62 6 chr15 18389331 18389667 -85105307 + Lx4B LINE L1 6660 7014 -44 5 725 787 269 84 0 chr15 18389680 18389907 -85105067 + MTEb LTR MaLR 130 375 -4 5 725 1772 323 43 22 chr15 18390109 18390982 -85103992 + Lx8 LINE L1 6136 7027 -446 5 725 459 52 0 0 chr15 18391024 18391082 -85103892 + (TA)n Simple_repeat Simple_repeat 1 58 0 5 725 308 345 25 8 chr15 18391169 18391306 -85103668 + B1F SINE Alu 6 144 -5 5 725 261 0 0 0 chr15 18391501 18391530 -85103444 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 725 264 30 0 0 chr15 18391530 18391562 -85103412 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 725 245 29 29 0 chr15 18392244 18392278 -85102696 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 725 392 277 59 26 chr15 18392335 18392487 -85102487 - Lx5 LINE L1 -1 7049 6893 5 725 1537 269 35 30 chr15 18392491 18392917 -85102057 + Lx5 LINE L1 6389 6816 -234 5 725 22 0 0 0 chr15 18393403 18393425 -85101549 + AT_rich Low_complexity Low_complexity 1 22 0 5 725 1663 173 82 125 chr15 18393524 18393973 -85101001 - RLTR23 LTR ERV1 0 430 1 5 725 3337 191 116 108 chr15 18393991 18394788 -85100186 + RLTR25B LTR ERVK 1 837 -191 5 725 474 88 0 0 chr15 18394788 18394856 -85100118 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 725 3337 191 116 108 chr15 18394856 18395078 -85099896 + RLTR25B LTR ERVK 838 1028 0 5 725 343 365 91 42 chr15 18396024 18396287 -85098687 + B4 SINE B4 1 276 -16 5 725 6312 96 60 1 chr15 18396482 18396843 -85098131 + Lx3A LINE L1 5520 5907 -1074 5 725 207 0 0 0 chr15 18396843 18396866 -85098108 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 5 725 6312 107 25 13 chr15 18396866 18397509 -85097465 + Lx3A LINE L1 5908 6552 -429 5 725 696 175 12 30 chr15 18397509 18397674 -85097300 + Lx3A LINE L1 6820 6981 0 5 725 1723 144 80 7 chr15 18397801 18398101 -85096873 + ORR1A3 LTR MaLR 5 326 0 5 725 22 35 0 0 chr15 18398750 18398779 -85096195 + AT_rich Low_complexity Low_complexity 1 29 0 5 725 662 165 25 8 chr15 18399085 18399101 -85095873 + L1Md_T LINE L1 6227 6245 -337 5 725 1772 109 8 0 chr15 18399101 18399366 -85095608 - L1_Mus3 LINE L1 -4 6634 6368 5 725 878 46 0 0 chr15 18399366 18399474 -85095500 + L1_Mus3 LINE L1 6240 6347 -291 5 725 783 248 40 56 chr15 18399470 18399672 -85095302 + Lx7 LINE L1 7397 7596 -100 5 725 810 48 0 0 chr15 18399672 18399775 -85095199 + (GA)n Simple_repeat Simple_repeat 2 104 0 5 725 783 248 40 56 chr15 18399775 18399875 -85095099 + Lx7 LINE L1 7597 7693 -3 5 725 30647 106 21 17 chr15 18400227 18403985 -85090989 + L1Md_F2 LINE L1 387 4195 -1688 5 725 342 0 0 0 chr15 18403985 18404023 -85090951 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 725 30647 88 5 15 chr15 18404023 18404302 -85090672 + L1Md_F2 LINE L1 4196 4459 -1424 5 725 3428 51 0 7 chr15 18404302 18404739 -85090235 + L1Md_F3 LINE L1 6151 6584 0 5 725 30647 88 5 15 chr15 18404739 18405896 -85089078 + L1Md_F2 LINE L1 4460 5584 -299 5 725 7552 74 4 4 chr15 18405896 18406892 -85088082 + L1Md_F2 LINE L1 5587 6582 0 5 725 1310 91 43 0 chr15 18407399 18407586 -85087388 + B2_Mm2 SINE B2 1 195 0 5 725 461 17 0 17 chr15 18407618 18407677 -85087297 + (TAA)n Simple_repeat Simple_repeat 3 60 0 5 725 255 61 0 0 chr15 18407926 18407959 -85087015 + (A)n Simple_repeat Simple_repeat 1 33 0 5 725 185 0 40 0 chr15 18408330 18408355 -85086619 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 5 725 216 0 0 0 chr15 18408426 18408450 -85086524 + (A)n Simple_repeat Simple_repeat 1 24 0 5 725 252 92 30 30 chr15 18409708 18409775 -85085199 + (TTTG)n Simple_repeat Simple_repeat 4 70 0 6 725 3589 31 42 9 chr15 18410379 18410829 -85084145 + L1Md_F2 LINE L1 6115 6579 -3 6 725 25 31 0 0 chr15 18411281 18411313 -85083661 + AT_rich Low_complexity Low_complexity 1 32 0 6 725 431 327 90 5 chr15 18412013 18412213 -85082761 - Tigger1 DNA MER2_type -1309 1109 893 6 725 254 275 43 58 chr15 18412217 18412314 -85082660 - RLTR26 LTR ERVK -7 635 542 6 725 180 77 0 0 chr15 18412314 18412340 -85082634 + (CTG)n Simple_repeat Simple_repeat 2 27 0 6 725 254 275 43 58 chr15 18412340 18412381 -85082593 - RLTR26 LTR ERVK -101 541 499 6 725 657 237 62 124 chr15 18412400 18412641 -85082333 - RLTR26 LTR ERVK -279 363 138 6 725 2333 121 3 3 chr15 18412837 18413192 -85081782 - Lx LINE L1 -2 6652 6298 6 725 777 109 0 32 chr15 18413234 18413357 -85081617 + RMER6B LTR ERVK 1 119 -342 6 725 23 33 0 0 chr15 18413414 18413444 -85081530 + AT_rich Low_complexity Low_complexity 1 30 0 6 725 283 357 0 0 chr15 18414118 18414202 -85080772 + B4 SINE B4 2 85 -207 6 725 1586 166 276 3 chr15 18414212 18414499 -85080475 + RMER6D LTR ERVK 1 335 -385 6 725 923 50 8 0 chr15 18414499 18414620 -85080354 + (GA)n Simple_repeat Simple_repeat 2 123 0 6 725 1586 166 276 3 chr15 18414620 18414712 -85080262 + RMER6D LTR ERVK 336 483 -237 6 725 929 128 14 0 chr15 18414712 18414860 -85080114 - L1_Mus3 LINE L1 -324 6314 6165 6 725 1026 50 68 6 chr15 18414860 18415022 -85079952 + L1_Mus3 LINE L1 6462 6633 -5 6 725 1110 218 4 8 chr15 18415032 18415268 -85079706 + RMER6D LTR ERVK 456 690 0 6 725 419 66 53 0 chr15 18415370 18415446 -85079528 + (TA)n Simple_repeat Simple_repeat 2 81 0 6 725 28 48 0 0 chr15 18415923 18415965 -85079009 + AT_rich Low_complexity Low_complexity 1 42 0 6 725 29 28 0 0 chr15 18416149 18416185 -85078789 + AT_rich Low_complexity Low_complexity 1 36 0 6 725 2271 121 43 5 chr15 18416238 18416612 -85078362 - L1_Mus4 LINE L1 -6 6630 6243 6 725 2039 104 1 14 chr15 18416612 18416936 -85078038 - L1_Mus4 LINE L1 -590 6046 5724 6 725 323 326 44 66 chr15 18419096 18419434 -85075540 + L1ME2 LINE L1 5541 5905 -259 6 725 414 0 0 0 chr15 18421120 18421166 -85073808 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 725 309 362 21 28 chr15 18421174 18421316 -85073658 - B4A SINE B4 -35 257 117 6 725 291 243 36 45 chr15 18422249 18422361 -85072613 - Lx5 LINE L1 -5 7045 6935 6 725 7195 215 16 41 chr15 18422360 18424250 -85070724 - L1_Mur3 LINE L1 -444 5433 3591 6 725 3476 224 48 60 chr15 18424249 18426116 -85068858 - L1_Mur3 LINE L1 -3207 2679 899 6 725 267 31 0 0 chr15 18426551 18426583 -85068391 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 725 633 162 0 21 chr15 18426583 18426728 -85068246 - Lx3A LINE L1 -12 6969 6828 6 725 4360 164 47 6 chr15 18427014 18427809 -85067165 - Lx4A LINE L1 -2 7056 6230 6 725 238 154 58 0 chr15 18427812 18427864 -85067110 - Lx4A LINE L1 -1171 5887 5833 6 725 754 170 4 5 chr15 18427845 18427982 -85066992 + Lx4A LINE L1 5831 5969 -1089 6 725 1420 192 0 4 chr15 18428014 18428280 -85066694 + Lx4A LINE L1 5749 6013 -1045 6 725 544 164 58 0 chr15 18428279 18428383 -85066591 + Lx9 LINE L1 7368 7477 -167 6 725 324 0 0 0 chr15 18428383 18428419 -85066555 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 725 909 151 6 0 chr15 18428740 18428906 -85066068 + Lx4A LINE L1 6019 6185 -873 6 725 3143 86 32 8 chr15 18429298 18429769 -85065205 + L1_Mus3 LINE L1 6154 6635 -3 6 725 546 57 0 0 chr15 18430128 18430198 -85064776 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 6 725 258 32 0 0 chr15 18430814 18430845 -85064129 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 725 184 264 143 18 chr15 18431184 18431296 -85063678 - L3 LINE CR1 -1540 2949 2824 6 725 1933 137 3 6 chr15 18431624 18431955 -85063019 + L1_Mus4 LINE L1 6307 6636 0 6 725 590 48 0 72 chr15 18432771 18432882 -85062092 + L1Md_F2 LINE L1 6480 6582 0 6 725 22 35 0 0 chr15 18433428 18433457 -85061517 + AT_rich Low_complexity Low_complexity 1 29 0 6 725 26 30 0 0 chr15 18433792 18433825 -85061149 + AT_rich Low_complexity Low_complexity 1 33 0 6 725 22 0 0 0 chr15 18433891 18433913 -85061061 + AT_rich Low_complexity Low_complexity 1 22 0 6 725 406 77 0 0 chr15 18434174 18434239 -85060735 + L1_Mus3 LINE L1 6564 6628 -10 6 725 25 31 0 0 chr15 18434240 18434272 -85060702 + AT_rich Low_complexity Low_complexity 1 32 0 6 725 1945 69 0 0 chr15 18434343 18434590 -85060384 + Lx3_Mus LINE L1 6534 6780 -229 6 725 1190 303 56 31 chr15 18435443 18435927 -85059047 - Lx7 LINE L1 -687 7009 6514 6 725 342 235 0 0 chr15 18436454 18436556 -85058418 + (TA)n Simple_repeat Simple_repeat 2 103 0 6 725 3152 101 61 36 chr15 18436560 18437083 -85057891 - Lx LINE L1 -12 6642 6107 6 725 488 103 0 0 chr15 18437089 18437157 -85057817 - B2_Mm2 SINE B2 -118 77 10 6 725 22 0 0 0 chr15 18437322 18437344 -85057630 + AT_rich Low_complexity Low_complexity 1 22 0 6 725 1172 55 7 0 chr15 18438564 18438710 -85056264 - B1_Mm SINE Alu 0 147 1 6 725 1653 203 32 69 chr15 18440467 18440875 -85054099 + ORR1B1 LTR MaLR 1 393 -1 6 725 710 93 9 0 chr15 18442030 18442138 -85052836 + (TTTC)n Simple_repeat Simple_repeat 2 110 0 6 725 318 242 15 0 chr15 18442375 18442441 -85052533 - B3A SINE B2 -131 67 1 6 725 339 25 0 0 chr15 18443290 18443330 -85051644 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 725 317 378 33 61 chr15 18443363 18443577 -85051397 - B4A SINE B4 -56 236 29 6 725 279 0 0 0 chr15 18443932 18443963 -85051011 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 725 356 0 0 22 chr15 18443963 18444007 -85050967 + (TA)n Simple_repeat Simple_repeat 1 44 0 6 725 342 0 0 0 chr15 18446439 18446477 -85048497 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 725 271 275 41 103 chr15 18446479 18446625 -85048349 - MLT1A1 LTR MaLR -271 137 1 6 725 435 321 134 23 chr15 18446814 18446986 -85047988 + B3A SINE B2 1 191 -7 6 725 192 135 0 0 chr15 18447740 18447777 -85047197 + (TAAAAA)n Simple_repeat Simple_repeat 6 42 0 6 725 2844 171 68 5 chr15 18448115 18448685 -85046289 + Lx3C LINE L1 6368 6973 -3 6 725 189 107 0 0 chr15 18448696 18448724 -85046250 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 6 725 1936 73 59 0 chr15 18449221 18449493 -85045481 - L1_Mus4 LINE L1 -214 6422 6135 6 725 1835 102 31 22 chr15 18449493 18449812 -85045162 - RLTRETN_Mm LTR ERVK 0 322 1 6 725 18272 146 29 20 chr15 18449812 18456624 -85038350 - ETnERV2-int LTR ERVK -282 7124 1 6 725 1845 99 31 22 chr15 18456624 18456943 -85038031 - RLTRETN_Mm LTR ERVK 0 322 1 6 725 1163 155 45 9 chr15 18456969 18457190 -85037784 + L1_Mus4 LINE L1 6403 6631 -5 6 725 268 390 25 55 chr15 18457236 18457399 -85037575 - RSINE1 SINE B4 0 165 8 6 725 399 179 0 0 chr15 18458994 18459100 -85035874 + (TG)n Simple_repeat Simple_repeat 2 107 0 6 725 646 176 202 5 chr15 18459143 18459331 -85035643 + URR1B DNA MER1_type 1 225 0 6 725 386 363 19 13 chr15 18460340 18460499 -85034475 - MER5A DNA MER1_type 0 189 30 6 725 27 0 0 0 chr15 18460881 18460908 -85034066 + AT_rich Low_complexity Low_complexity 1 27 0 6 725 275 301 42 59 chr15 18461934 18462067 -85032907 + MLT1A1 LTR MaLR 244 403 -5 6 725 6723 77 19 0 chr15 18463313 18464189 -85030785 + RLTR13B1 LTR ERVK 1 893 0 6 725 288 53 0 0 chr15 18464254 18464292 -85030682 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 6 725 291 157 0 0 chr15 18464293 18464344 -85030630 + (TATG)n Simple_repeat Simple_repeat 4 54 0 6 725 28 29 0 0 chr15 18464717 18464752 -85030222 + AT_rich Low_complexity Low_complexity 1 35 0 6 725 21 0 0 0 chr15 18464801 18464822 -85030152 + AT_rich Low_complexity Low_complexity 1 21 0 6 725 420 321 61 36 chr15 18466021 18466186 -85028788 + MTE2b LTR MaLR 2 170 -209 6 725 270 0 0 0 chr15 18466537 18466567 -85028407 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 6 725 3057 132 47 32 chr15 18467147 18467701 -85027273 - Lx LINE L1 -6 6648 6087 6 725 3395 104 11 1 chr15 18467707 18468408 -85026566 + L1_Mus4 LINE L1 5369 6080 -556 6 725 460 249 3 28 chr15 18469001 18469131 -85025843 - B1_Mus1 SINE Alu 0 120 1 6 725 21 36 0 0 chr15 18469211 18469239 -85025735 + AT_rich Low_complexity Low_complexity 1 28 0 6 725 2988 88 9 0 chr15 18469280 18469700 -85025274 - Lx3_Mus LINE L1 0 7009 6586 6 725 494 291 86 6 chr15 18469799 18470094 -85024880 - Lx7 LINE L1 -1730 5914 5600 6 725 221 250 18 0 chr15 18470170 18470226 -85024748 - B3A SINE B2 -141 57 1 6 725 228 286 214 0 chr15 18470977 18471089 -85023885 + MLT1J LTR MaLR 247 382 -130 6 725 244 319 32 65 chr15 18471866 18471897 -85023077 + MER58B DNA MER1_type 188 216 -125 6 725 192 77 0 0 chr15 18471897 18471923 -85023051 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 725 244 319 32 65 chr15 18471923 18472015 -85022959 + MER58B DNA MER1_type 217 307 -34 6 725 21 36 0 0 chr15 18472115 18472143 -85022831 + AT_rich Low_complexity Low_complexity 1 28 0 6 725 669 58 0 0 chr15 18472566 18472652 -85022322 + (TA)n Simple_repeat Simple_repeat 2 87 0 6 725 430 330 98 80 chr15 18473089 18473475 -85021499 - MTE-int LTR MaLR -35 1545 1153 6 725 459 0 0 0 chr15 18473735 18473786 -85021188 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 6 725 1209 319 83 42 chr15 18473987 18474602 -85020372 - Lx9 LINE L1 -451 7193 6554 6 725 7153 110 13 7 chr15 18474640 18475847 -85019127 - L1_Mus4 LINE L1 -1 6635 5420 6 725 499 297 97 0 chr15 18476167 18476342 -85018632 - ERVL-B4-int LTR ERVL -1961 3796 3605 6 725 552 341 42 45 chr15 18476415 18476728 -85018246 - ERVL-B4-int LTR ERVL -2254 3503 3192 6 725 1337 249 99 39 chr15 18476760 18477174 -85017800 - RMER10A LTR ERVL -1 441 3 6 725 350 324 94 56 chr15 18477232 18477397 -85017577 - ERVL-B4-int LTR ERVL -2778 2936 2773 6 725 4698 135 10 44 chr15 18477397 18478218 -85016756 + Lx3A LINE L1 6175 6966 -15 6 725 180 0 0 0 chr15 18478218 18478238 -85016736 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 6 725 4698 135 10 44 chr15 18478238 18478252 -85016722 + Lx3A LINE L1 6967 6980 -1 6 725 350 324 94 56 chr15 18478252 18478446 -85016528 - ERVL-B4-int LTR ERVL -2942 2772 2564 6 725 414 0 0 0 chr15 18478480 18478526 -85016448 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 725 1152 83 6 0 chr15 18478780 18478936 -85016038 - MT2C_Mm LTR ERVL 0 475 319 6 725 228 143 0 0 chr15 18479089 18479131 -85015843 + (A)n Simple_repeat Simple_repeat 1 42 0 6 725 313 308 66 0 chr15 18479134 18479225 -85015749 + RSINE1 SINE B4 8 104 -61 6 725 1974 301 51 20 chr15 18479364 18480052 -85014922 - ERVL-B4-int LTR ERVL -5004 710 2 6 725 477 0 0 0 chr15 18480097 18480150 -85014824 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 725 219 167 24 0 chr15 18480424 18480466 -85014508 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 7 725 465 90 0 0 chr15 18480530 18480597 -85014377 + (TA)n Simple_repeat Simple_repeat 2 68 0 7 725 1129 82 0 0 chr15 18480721 18480868 -85014106 + B1_Mus1 SINE Alu 2 148 0 7 725 525 105 0 0 chr15 18480868 18480963 -85014011 + (A)n Simple_repeat Simple_repeat 1 95 0 7 725 245 114 23 0 chr15 18480972 18481016 -85013958 + (CAAA)n Simple_repeat Simple_repeat 4 48 0 7 726 21 0 0 0 chr15 18482064 18482085 -85012889 + AT_rich Low_complexity Low_complexity 1 21 0 7 726 3335 38 2 0 chr15 18482700 18483095 -85011879 - MTA_Mm LTR MaLR 0 396 1 7 726 8317 58 16 6 chr15 18483095 18484178 -85010796 - MTA_Mm-int LTR MaLR 0 1098 5 7 726 2996 60 26 0 chr15 18484179 18484565 -85010409 - MTA_Mm LTR MaLR 0 396 1 7 726 867 112 0 0 chr15 18484955 18485089 -85009885 + (GAA)n Simple_repeat Simple_repeat 3 136 0 7 726 306 354 15 0 chr15 18485109 18485239 -85009735 + ID_B1 SINE B4 92 223 -1 7 726 348 118 43 29 chr15 18485375 18485445 -85009529 + Lx3_Mus LINE L1 6934 7004 -5 7 726 238 284 63 0 chr15 18486777 18486872 -85008102 + L1MC3 LINE L1 7346 7446 -339 7 726 8502 98 25 57 chr15 18486913 18488704 -85006270 + Lx3A LINE L1 5270 6970 -11 7 726 564 89 0 0 chr15 18488704 18488783 -85006191 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 7 726 2958 74 15 0 chr15 18488913 18489307 -85005667 - MTB LTR MaLR 0 400 1 7 726 1827 106 18 4 chr15 18489632 18489906 -85005068 + L1_Mus2 LINE L1 6289 6566 0 7 726 390 333 51 84 chr15 18490089 18490364 -85004610 + MT2A LTR ERVL 7 272 -261 7 726 1127 68 0 27 chr15 18490365 18490501 -85004473 + B1_Mus2 SINE Alu 1 135 -12 7 726 416 35 17 0 chr15 18490501 18490559 -85004415 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 7 726 1127 68 0 27 chr15 18490559 18490572 -85004402 + B1_Mus2 SINE Alu 136 146 -1 7 726 730 123 99 21 chr15 18490681 18490822 -85004152 - Lx2 LINE L1 -631 6366 6215 7 726 2949 134 148 9 chr15 18490819 18491368 -85003606 + Lx2 LINE L1 6373 6997 0 7 726 256 27 0 0 chr15 18491386 18491423 -85003551 - L1_Mus2 LINE L1 -1 6565 6529 7 726 183 202 38 0 chr15 18491593 18491672 -85003302 + (TCTA)n Simple_repeat Simple_repeat 1 82 0 7 726 21 36 0 0 chr15 18492327 18492355 -85002619 + AT_rich Low_complexity Low_complexity 1 28 0 7 726 682 343 49 6 chr15 18493130 18493435 -85001539 - MLT1F1 LTR MaLR 0 569 254 7 726 468 143 0 0 chr15 18493444 18493528 -85001446 + (TG)n Simple_repeat Simple_repeat 2 85 0 7 726 264 91 0 0 chr15 18493529 18493573 -85001401 + (GA)n Simple_repeat Simple_repeat 2 45 0 7 726 523 164 16 0 chr15 18495642 18495770 -84999204 + (TAGA)n Simple_repeat Simple_repeat 3 132 0 7 726 4423 49 11 0 chr15 18496591 18497140 -84997834 - L1Md_T LINE L1 -2 6580 6026 7 726 1111 259 90 27 chr15 18497458 18497792 -84997182 + ORR1D1 LTR MaLR 6 360 -14 7 726 4212 126 18 12 chr15 18497792 18498466 -84996508 + Lx3_Mus LINE L1 6307 6987 -22 7 726 180 0 0 0 chr15 18498466 18498486 -84996488 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 7 726 3031 283 79 83 chr15 18498501 18499168 -84995806 + ORR1D1-int LTR MaLR 1 617 -892 7 726 189 0 0 0 chr15 18499168 18499189 -84995785 + (TAA)n Simple_repeat Simple_repeat 3 23 0 7 726 3031 243 56 64 chr15 18499189 18499989 -84994985 + ORR1D1-int LTR MaLR 533 1324 -46 7 726 272 363 16 63 chr15 18500728 18500919 -84994055 + B3A SINE B2 1 182 -16 1 726 215 211 0 0 chr15 18500919 18500957 -84994017 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 726 279 79 0 0 chr15 18502027 18502065 -84992909 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 3 726 371 240 54 3 chr15 18502185 18502319 -84992655 + L1M5 LINE L1 5596 5739 -439 4 726 21 71 0 0 chr15 18503100 18503142 -84991832 + AT_rich Low_complexity Low_complexity 1 42 0 5 726 1156 282 79 14 chr15 18503255 18503697 -84991277 + Lx3C LINE L1 6503 6973 -3 6 726 3283 67 55 13 chr15 18503784 18503861 -84991113 - L1Md_F2 LINE L1 -3 6579 6507 7 726 189 74 0 0 chr15 18503861 18503888 -84991086 + (CCCA)n Simple_repeat Simple_repeat 3 29 0 8 726 3283 67 55 13 chr15 18503888 18504265 -84990709 - L1Md_F2 LINE L1 -76 6506 6107 7 726 4241 42 0 0 chr15 18504265 18504850 -84990124 + L1Md_F2 LINE L1 5508 6092 -490 7 726 329 372 57 5 chr15 18504931 18505191 -84989783 - Lx8 LINE L1 -54 7419 7135 9 726 396 0 0 0 chr15 18505975 18506019 -84988955 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 726 243 192 77 0 chr15 18507157 18507209 -84987765 - MTEa LTR MaLR -3 376 321 1 726 465 70 0 0 chr15 18507209 18507280 -84987694 + Lx3_Mus LINE L1 6939 7009 0 1 726 436 370 51 98 chr15 18507298 18507638 -84987336 - MTEa LTR MaLR -54 325 3 1 726 238 345 65 52 chr15 18508635 18508788 -84986186 - RSINE1 SINE B4 -8 157 3 1 726 316 344 88 50 chr15 18508922 18509161 -84985813 - MLT1A0 LTR MaLR -5 360 113 1 726 612 0 0 0 chr15 18509162 18509230 -84985744 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 1 726 387 317 16 24 chr15 18509258 18509384 -84985590 - B1_Mur1 SINE Alu -12 137 13 1 726 198 103 0 0 chr15 18511761 18511790 -84983184 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1 726 314 267 27 0 chr15 18511790 18511865 -84983109 - ID4_ SINE ID -5 78 2 1 726 459 48 0 0 chr15 18512464 18512526 -84982448 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 726 449 279 150 36 chr15 18512700 18512867 -84982107 - B3 SINE B2 -27 189 4 2 726 941 262 57 50 chr15 18513673 18514074 -84980900 + Lx7 LINE L1 7266 7669 -27 2 726 4519 154 69 36 chr15 18514090 18515029 -84979945 - L1_Mur2 LINE L1 -1084 4793 3824 2 726 183 139 0 0 chr15 18515414 18515450 -84979524 + (TTTTTG)n Simple_repeat Simple_repeat 5 40 0 2 726 183 129 0 0 chr15 18516016 18516047 -84978927 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 2 726 2909 204 76 18 chr15 18516095 18516855 -84978119 - L1_Mur3 LINE L1 -800 5080 4277 2 726 28 0 0 0 chr15 18517263 18517291 -84977683 + AT_rich Low_complexity Low_complexity 1 28 0 2 726 3427 204 93 8 chr15 18517664 18518449 -84976525 - Lx3C LINE L1 -26 6950 6099 2 726 6286 183 45 11 chr15 18518453 18519776 -84975198 - L1_Mur1 LINE L1 -293 5593 4225 2 726 1270 146 10 0 chr15 18519774 18519979 -84974995 - L1_Mur1 LINE L1 -835 5051 4845 2 726 2230 186 2 35 chr15 18519966 18520729 -84974245 - L1_Mur1 LINE L1 -2310 1604 866 2 726 671 248 42 33 chr15 18521131 18521344 -84973630 + B3 SINE B2 2 216 0 3 726 23 0 0 0 chr15 18521344 18521367 -84973607 + AT_rich Low_complexity Low_complexity 1 23 0 3 726 24 53 0 0 chr15 18521412 18521450 -84973524 + AT_rich Low_complexity Low_complexity 1 38 0 3 726 1132 336 43 29 chr15 18522565 18523123 -84971851 - MER89-int LTR ERV1 -647 6154 5589 3 726 526 278 16 16 chr15 18523559 18523687 -84971287 + B3 SINE B2 2 129 -87 3 726 279 75 0 0 chr15 18523885 18523925 -84971049 + ORR1A3 LTR MaLR 287 326 0 3 726 359 352 109 25 chr15 18524970 18525410 -84969564 - MER89-int LTR ERV1 -3206 3595 3119 3 726 279 333 13 0 chr15 18525843 18525921 -84969053 - MER89-int LTR ERV1 -4175 2626 2548 3 726 2346 154 34 7 chr15 18525997 18526410 -84968564 + Lx3B LINE L1 6543 6966 -7 3 726 288 0 0 0 chr15 18526425 18526457 -84968517 + (TAA)n Simple_repeat Simple_repeat 1 32 0 3 726 748 290 37 21 chr15 18526484 18526674 -84968300 + B3 SINE B2 9 201 -15 3 726 4085 62 4 24 chr15 18528852 18529401 -84965573 + L1Md_F2 LINE L1 6045 6582 0 3 726 662 327 54 16 chr15 18529431 18529745 -84965229 + Lx8 LINE L1 6688 7013 -460 4 726 1140 291 82 115 chr15 18529762 18530396 -84964578 + RLTR18 LTR ERVK 1 613 -3 4 726 558 322 157 19 chr15 18530416 18530792 -84964182 + Lx8 LINE L1 7041 7468 -5 4 726 544 294 76 40 chr15 18531804 18532105 -84962869 - MLT1B LTR MaLR -45 345 34 4 726 321 233 0 0 chr15 18532105 18532195 -84962779 + (TA)n Simple_repeat Simple_repeat 2 91 0 4 726 1245 136 13 13 chr15 18533350 18533581 -84961393 - Lx2B LINE L1 0 7000 6770 4 726 1702 126 111 5 chr15 18533582 18533920 -84961054 + Lx2B LINE L1 6460 6758 -242 4 726 944 296 46 40 chr15 18533922 18534225 -84960749 + MTE2a LTR MaLR 75 379 0 4 726 1306 62 39 11 chr15 18534371 18534550 -84960424 - B2_Mm2 SINE B2 -11 184 1 4 726 777 230 110 22 chr15 18534748 18534975 -84959999 - Lx9 LINE L1 -937 6707 6461 4 726 456 19 0 0 chr15 18535527 18535580 -84959394 + (TAAAA)n Simple_repeat Simple_repeat 2 54 0 4 726 607 278 39 69 chr15 18535715 18536001 -84958973 + RLTR11A2 LTR ERVK 10 283 -170 4 726 342 262 71 43 chr15 18536053 18536222 -84958752 + RLTR11A2 LTR ERVK 284 490 -38 4 726 26 30 0 0 chr15 18536225 18536258 -84958716 + AT_rich Low_complexity Low_complexity 1 33 0 5 726 252 120 0 0 chr15 18537844 18537894 -84957080 + (T)n Simple_repeat Simple_repeat 1 50 0 5 726 306 67 0 0 chr15 18538397 18538442 -84956532 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 726 627 39 0 0 chr15 18538442 18538519 -84956455 + (GA)n Simple_repeat Simple_repeat 2 79 0 5 726 237 330 153 40 chr15 18539695 18539897 -84955077 + Charlie1a DNA MER1_type 1 225 -1230 5 726 433 316 107 15 chr15 18539969 18540165 -84954809 - MTD LTR MaLR -45 374 161 5 726 562 367 51 53 chr15 18540200 18540822 -84954152 + Charlie1a DNA MER1_type 296 916 -539 5 726 1463 150 264 25 chr15 18540842 18541164 -84953810 + RLTR17 LTR ERVK 98 496 -196 5 726 201 175 0 0 chr15 18541233 18541273 -84953701 + (TATATG)n Simple_repeat Simple_repeat 1 40 0 5 726 246 315 0 11 chr15 18541350 18541440 -84953534 + L1M1 LINE L1 5753 5841 -459 5 726 513 0 0 0 chr15 18541751 18541808 -84953166 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 726 915 301 68 36 chr15 18541832 18542246 -84952728 + MERVK26-int LTR ERVK 6213 6639 -280 6 726 843 182 0 0 chr15 18542656 18542821 -84952153 + GA-rich Low_complexity Low_complexity 4 168 0 6 726 257 274 0 0 chr15 18542837 18542899 -84952075 + MTEa LTR MaLR 3 64 -315 6 726 557 297 54 0 chr15 18542943 18543128 -84951846 + MTEa LTR MaLR 177 371 -8 6 726 455 336 84 68 chr15 18543403 18543713 -84951261 - MLT2B2 LTR ERVL -200 315 1 6 726 611 142 8 0 chr15 18544626 18544746 -84950228 - L1_Mus3 LINE L1 -8 6630 6510 6 726 1119 16 0 0 chr15 18544997 18545126 -84949848 + (TG)n Simple_repeat Simple_repeat 2 130 0 6 726 1786 123 86 3 chr15 18545458 18545760 -84949214 - IAPEY3_LTR LTR ERVK -5 327 1 6 726 21 36 0 0 chr15 18545840 18545868 -84949106 + AT_rich Low_complexity Low_complexity 1 28 0 6 726 1054 109 0 0 chr15 18546901 18547048 -84947926 + B1_Mm SINE Alu 1 147 0 6 726 450 0 0 0 chr15 18547056 18547106 -84947868 + (GA)n Simple_repeat Simple_repeat 1 50 0 6 726 21 0 0 0 chr15 18547888 18547909 -84947065 + AT_rich Low_complexity Low_complexity 1 21 0 7 726 1826 172 50 8 chr15 18548546 18548922 -84946052 + Lx LINE L1 6263 6654 0 7 726 189 0 0 0 chr15 18549474 18549495 -84945479 + (T)n Simple_repeat Simple_repeat 1 21 0 7 726 39 0 0 0 chr15 18550380 18550419 -84944555 + AT_rich Low_complexity Low_complexity 1 39 0 7 726 183 114 0 0 chr15 18550526 18550561 -84944413 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 7 726 700 355 78 58 chr15 18551371 18551914 -84943060 - MERVK26-int LTR ERVK -2759 4160 3613 7 726 3068 63 5 8 chr15 18551914 18552311 -84942663 - MTA_Mm LTR MaLR 0 396 1 7 726 700 355 78 58 chr15 18552311 18553299 -84941675 - MERVK26-int LTR ERVK -3307 3612 2599 7 726 362 343 91 40 chr15 18553505 18553957 -84941017 - MERVK26-int LTR ERVK -4916 2003 1529 7 726 271 157 20 0 chr15 18554462 18554513 -84940461 + SSU-rRNA_Hsa rRNA rRNA 1317 1368 -501 7 726 363 338 29 116 chr15 18555132 18555443 -84939531 - MERVK26-int LTR ERVK -6564 355 72 7 726 1235 209 60 2 chr15 18555537 18555994 -84938980 - RMER20A LTR ERVK 0 516 1 7 726 345 278 69 38 chr15 18557239 18557370 -84937604 - MER58B DNA MER1_type -91 250 116 7 726 231 88 0 0 chr15 18557550 18557584 -84937390 + (TA)n Simple_repeat Simple_repeat 1 34 0 8 726 218 301 34 67 chr15 18557672 18557761 -84937213 + RSINE1 SINE B4 4 89 -76 8 726 549 0 0 0 chr15 18557798 18557859 -84937115 + (TC)n Simple_repeat Simple_repeat 2 62 0 8 726 2281 319 69 17 chr15 18558113 18559182 -84935792 - Lx9 LINE L1 -180 7464 6340 8 726 282 95 0 0 chr15 18559202 18559244 -84935730 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 726 21 0 0 0 chr15 18559834 18559855 -84935119 + AT_rich Low_complexity Low_complexity 1 21 0 8 726 183 67 21 62 chr15 18559957 18560005 -84934969 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 8 726 883 306 50 7 chr15 18560110 18560390 -84934584 - Lx7 LINE L1 -484 7212 6921 8 726 853 332 74 12 chr15 18560527 18560683 -84934291 - MTD LTR MaLR -8 411 246 8 726 480 35 0 0 chr15 18560683 18560741 -84934233 + (TA)n Simple_repeat Simple_repeat 2 59 0 8 726 853 332 74 12 chr15 18560741 18560922 -84934052 - MTD LTR MaLR -174 245 53 8 726 34 0 0 0 chr15 18561024 18561058 -84933916 + AT_rich Low_complexity Low_complexity 1 34 0 9 726 1228 54 0 0 chr15 18561267 18561415 -84933559 - B1_Mus1 SINE Alu 0 148 1 9 726 1016 127 0 0 chr15 18561463 18561605 -84933369 + B1_Mus2 SINE Alu 2 143 -4 9 726 491 31 0 15 chr15 18561609 18561675 -84933299 + (TAAA)n Simple_repeat Simple_repeat 4 68 0 9 726 3393 51 5 0 chr15 18561720 18562148 -84932826 + L1Md_F2 LINE L1 6152 6581 -1 9 726 28 0 0 0 chr15 18562804 18562832 -84932142 + AT_rich Low_complexity Low_complexity 1 28 0 9 726 180 0 0 0 chr15 18564163 18564183 -84930791 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 9 726 189 0 0 0 chr15 18564480 18564501 -84930473 + (T)n Simple_repeat Simple_repeat 1 21 0 9 726 1189 48 0 0 chr15 18564501 18564648 -84930326 - B1_Mus2 SINE Alu 0 147 1 9 726 37 39 0 0 chr15 18565080 18565131 -84929843 + AT_rich Low_complexity Low_complexity 1 51 0 9 726 630 39 0 0 chr15 18565390 18565467 -84929507 + (CTG)n Simple_repeat Simple_repeat 3 79 0 1 726 28852 101 12 7 chr15 18565753 18570599 -84924375 + L1Md_F2 LINE L1 365 5235 -648 1 726 288 0 0 0 chr15 18570599 18570631 -84924343 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 726 297 0 0 0 chr15 18570631 18570663 -84924311 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 726 1040 66 24 0 chr15 18570669 18570836 -84924138 + (TA)n Simple_repeat Simple_repeat 1 171 0 1 726 28852 91 7 4 chr15 18570836 18570979 -84923995 + L1Md_F2 LINE L1 5238 5382 -501 1 726 320 26 0 0 chr15 18570981 18571019 -84923955 + RLTR13B4 LTR ERVK 268 305 -588 1 726 3885 96 4 16 chr15 18571019 18571570 -84923404 + RLTR13B4 LTR ERVK 260 803 0 1 726 441 103 0 0 chr15 18571570 18571628 -84923346 + L1Md_F2 LINE L1 5529 5586 -297 1 726 6859 93 13 9 chr15 18571629 18572606 -84922368 + L1Md_F2 LINE L1 5588 6568 -14 1 726 243 0 0 0 chr15 18572787 18572814 -84922160 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 726 1214 111 0 24 chr15 18572817 18573029 -84921945 - Lx LINE L1 -12 6642 6436 1 726 1275 162 0 21 chr15 18573040 18573273 -84921701 + Lx2 LINE L1 6764 6991 -6 1 726 246 317 104 47 chr15 18573273 18573370 -84921604 - MLT2B3 LTR ERVL -212 342 239 1 726 297 326 113 53 chr15 18573397 18573698 -84921276 - ERVL-B4-int LTR ERVL -1791 3923 3605 1 726 551 350 78 51 chr15 18574274 18574708 -84920266 + MLT1D LTR MaLR 35 480 -25 1 726 9408 99 38 5 chr15 18575331 18577524 -84917450 - L1_Mus2 LINE L1 -2 6564 4326 1 726 553 85 70 7 chr15 18577693 18577835 -84917139 + (TA)n Simple_repeat Simple_repeat 1 151 0 1 726 265 146 36 0 chr15 18578026 18578081 -84916893 + L1_Mur3 LINE L1 3671 3727 -2153 1 726 1898 200 51 107 chr15 18578290 18578916 -84916058 - RMER6C LTR ERVK -4 686 96 1 726 980 115 12 0 chr15 18579738 18579903 -84915071 + Lx LINE L1 6488 6654 0 1 726 202 178 0 43 chr15 18579908 18579955 -84915019 + A-rich Low_complexity Low_complexity 5 49 0 1 726 835 196 29 99 chr15 18582181 18582424 -84912550 - RMER1C Other Other -8 1334 1109 1 726 302 297 0 0 chr15 18582756 18582857 -84912117 + MusHAL1 LINE L1 327 427 -2927 1 726 596 156 9 0 chr15 18582841 18582950 -84912024 + L1_Mur1 LINE L1 2483 2592 -3294 1 726 3354 223 140 5 chr15 18582947 18583844 -84911130 + Lx2B LINE L1 5917 7003 -55 1 726 29 47 0 0 chr15 18583846 18583889 -84911085 + AT_rich Low_complexity Low_complexity 1 43 0 1 726 668 177 32 16 chr15 18583964 18584090 -84910884 - B1_Mus1 SINE Alu -1 147 20 1 726 626 276 81 62 chr15 18584096 18584357 -84910617 - RMER1C Other Other -287 1055 800 1 726 351 247 0 0 chr15 18584457 18584530 -84910444 - Lx8 LINE L1 -599 6874 6802 1 726 207 175 53 0 chr15 18584536 18584593 -84910381 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 1 726 287 246 128 48 chr15 18585194 18585382 -84909592 + L1MA4 LINE L1 5715 5917 -383 1 726 232 316 18 54 chr15 18585584 18585751 -84909223 + L1_Rod LINE L1 5417 5577 -270 1 726 213 65 0 0 chr15 18585850 18585881 -84909093 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 1 726 324 48 0 0 chr15 18585883 18585925 -84909049 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 726 3272 48 0 0 chr15 18586262 18586659 -84908315 + L1_Mus1 LINE L1 6169 6565 -2 1 726 399 326 147 17 chr15 18586793 18587214 -84907760 + L1MD LINE L1 3596 4071 -2075 1 726 1000 271 38 0 chr15 18587612 18587874 -84907100 - Lx9 LINE L1 -332 7312 7041 1 726 369 0 0 0 chr15 18587882 18587923 -84907051 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 726 21 0 0 0 chr15 18588174 18588195 -84906779 + AT_rich Low_complexity Low_complexity 1 21 0 1 726 24 32 0 0 chr15 18588266 18588297 -84906677 + AT_rich Low_complexity Low_complexity 1 31 0 1 726 22 35 0 0 chr15 18589587 18589616 -84905358 + AT_rich Low_complexity Low_complexity 1 29 0 1 726 29 28 0 0 chr15 18589632 18589668 -84905306 + AT_rich Low_complexity Low_complexity 1 36 0 1 726 662 266 42 9 chr15 18589800 18590016 -84904958 + Lx9 LINE L1 7236 7458 -186 1 726 9694 63 1 1 chr15 18590014 18591994 -84902980 - L1Md_F2 LINE L1 -1 6581 4601 1 726 243 0 0 0 chr15 18592000 18592027 -84902947 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 726 12114 32 2 0 chr15 18592034 18594167 -84900807 - L1Md_T LINE L1 -1 6581 4445 1 726 32522 55 8 29 chr15 18594166 18600499 -84894475 - L1Md_T LINE L1 0 6582 390 1 726 590 240 0 0 chr15 18600546 18600700 -84894274 + Lx9 LINE L1 7484 7637 -7 1 726 2651 223 92 12 chr15 18600900 18601544 -84893430 - Lx9 LINE L1 -633 7011 6317 1 726 636 50 0 0 chr15 18601737 18601817 -84893157 + (CA)n Simple_repeat Simple_repeat 2 81 0 1 726 750 290 53 8 chr15 18601817 18602163 -84892811 - Lx9 LINE L1 -1679 5965 5572 1 726 336 279 13 143 chr15 18602201 18602395 -84892579 + Lx9 LINE L1 7346 7514 -130 1 726 213 39 0 0 chr15 18602395 18602421 -84892553 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 726 336 261 25 83 chr15 18602421 18602557 -84892417 + Lx9 LINE L1 7515 7643 -1 1 726 30 45 0 0 chr15 18602558 18602602 -84892372 + AT_rich Low_complexity Low_complexity 1 44 0 1 726 24 32 0 0 chr15 18602645 18602676 -84892298 + AT_rich Low_complexity Low_complexity 1 31 0 1 726 24 32 0 0 chr15 18602690 18602721 -84892253 + AT_rich Low_complexity Low_complexity 1 31 0 1 726 413 327 9 70 chr15 18603229 18603337 -84891637 - Lx8 LINE L1 -1056 6417 6310 1 726 396 0 0 0 chr15 18603337 18603381 -84891593 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1 726 1078 73 0 0 chr15 18603381 18603517 -84891457 - B1_Mus1 SINE Alu -12 136 1 1 726 413 327 9 70 chr15 18603517 18603637 -84891337 - Lx8 LINE L1 -1164 6309 6203 1 726 563 93 27 36 chr15 18603650 18603761 -84891213 - L1_Mus4 LINE L1 -6 6630 6521 1 726 381 265 179 25 chr15 18603823 18604024 -84890950 + L1M2 LINE L1 2806 3037 -3106 1 726 2444 34 0 0 chr15 18604024 18604318 -84890656 - L1_Mus1 LINE L1 -492 6075 5782 1 726 3615 64 9 0 chr15 18604318 18604784 -84890190 + L1_Mus1 LINE L1 6092 6561 -6 1 726 809 152 0 13 chr15 18604793 18604946 -84890028 + GA-rich Low_complexity Low_complexity 1 151 0 1 726 548 321 78 72 chr15 18604946 18605108 -84889866 + L1M2 LINE L1 3028 3183 -2960 1 726 964 286 60 14 chr15 18605108 18605459 -84889515 - ORR1D2 LTR MaLR 0 370 4 1 726 548 321 78 72 chr15 18605459 18605769 -84889205 + L1M2 LINE L1 3184 3503 -2640 1 726 308 312 106 35 chr15 18605813 18606012 -84888962 + L1M2 LINE L1 4957 5169 -974 1 726 257 286 161 5 chr15 18606024 18606217 -84888757 + L1M2 LINE L1 5152 5374 -769 1 726 1036 226 221 58 chr15 18606559 18607043 -84887931 + RMER2 LTR ERV1 1 563 -4 1 726 222 170 19 19 chr15 18608883 18608937 -84886037 + T-rich Low_complexity Low_complexity 4 57 0 1 726 25 0 0 0 chr15 18609225 18609250 -84885724 + AT_rich Low_complexity Low_complexity 1 25 0 1 726 896 127 41 24 chr15 18610050 18610219 -84884755 - Lx3_Mus LINE L1 -3 7006 6835 1 726 182 62 0 30 chr15 18610299 18610332 -84884642 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1 726 288 0 0 0 chr15 18610386 18610418 -84884556 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 726 3685 113 129 0 chr15 18610496 18611139 -84883835 - Lx3A LINE L1 -1204 4682 3957 1 90 7735 117 53 7 chr15 18611138 18612539 -84882435 + Lx3A LINE L1 4682 6136 -845 1 727 450 0 0 0 chr15 18612539 18612589 -84882385 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1 727 7735 140 45 13 chr15 18612589 18613429 -84881545 + Lx3A LINE L1 6137 6980 -1 1 727 210 37 0 0 chr15 18613429 18613456 -84881518 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 1 727 773 77 70 13 chr15 18613452 18613593 -84881381 + GA-rich Low_complexity Low_complexity 4 155 0 1 727 1284 79 0 0 chr15 18613593 18613771 -84881203 + (AGGGGG)n Simple_repeat Simple_repeat 1 178 0 1 727 773 77 70 13 chr15 18613771 18613786 -84881188 + polypurine Low_complexity Low_complexity 156 169 0 1 727 200 178 0 64 chr15 18613781 18613815 -84881159 + A-rich Low_complexity Low_complexity 1 30 0 1 727 1005 109 0 7 chr15 18613815 18613962 -84881012 + B1_Mm SINE Alu 2 147 0 1 727 200 178 0 64 chr15 18613962 18614005 -84880969 + A-rich Low_complexity Low_complexity 31 73 0 1 727 274 238 82 30 chr15 18615824 18615958 -84879016 + Lx9 LINE L1 7495 7635 -9 1 727 303 230 54 12 chr15 18616112 18616279 -84878695 + (TTATA)n Simple_repeat Simple_repeat 5 178 0 1 727 45 45 0 0 chr15 18616921 18616987 -84877987 + AT_rich Low_complexity Low_complexity 1 66 0 1 727 994 193 72 0 chr15 18617243 18617450 -84877524 - URR1A DNA MER1_type 0 226 5 1 727 291 161 0 0 chr15 18618939 18618995 -84875979 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 727 222 174 0 0 chr15 18620645 18620691 -84874283 + (TTA)n Simple_repeat Simple_repeat 3 48 0 1 727 481 338 0 29 chr15 18620731 18620868 -84874106 - RSINE1 SINE B4 -21 144 12 1 727 231 255 0 0 chr15 18620907 18620954 -84874020 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 727 306 0 0 0 chr15 18621367 18621401 -84873573 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 727 1036 88 0 21 chr15 18621402 18621542 -84873432 - B1_Mus1 SINE Alu -11 137 1 1 727 1537 127 81 11 chr15 18621710 18621981 -84872993 + Lx LINE L1 6365 6654 0 1 727 2359 201 83 79 chr15 18622450 18623137 -84871837 + RMER6C LTR ERVK 1 690 0 1 727 513 0 0 0 chr15 18623198 18623255 -84871719 + (TTTA)n Simple_repeat Simple_repeat 1 57 0 1 727 848 153 0 7 chr15 18623262 18623400 -84871574 - B2_Mm2 SINE B2 -56 139 3 1 727 181 386 56 21 chr15 18623830 18623973 -84871001 + L3 LINE CR1 4160 4307 -182 1 727 25 0 0 0 chr15 18625088 18625113 -84869861 + AT_rich Low_complexity Low_complexity 1 25 0 1 727 392 331 120 32 chr15 18626450 18626734 -84868240 - MER2 DNA MER2_type -36 309 1 1 727 7913 157 13 106 chr15 18626732 18628464 -84866510 - RLTR21 LTR ERVK 0 1572 1 1 727 361 347 81 91 chr15 18628609 18629005 -84865969 - MLT1C LTR MaLR -61 406 15 1 727 233 324 70 26 chr15 18629132 18629246 -84865728 + MIR SINE MIR 103 221 -41 1 727 23 54 0 0 chr15 18629771 18629808 -84865166 + AT_rich Low_complexity Low_complexity 1 37 0 1 727 794 182 61 28 chr15 18629813 18629994 -84864980 + B2_Mm2 SINE B2 2 188 -7 1 727 302 232 0 21 chr15 18630803 18630900 -84864074 + GA-rich Low_complexity Low_complexity 3 97 0 1 727 255 217 0 0 chr15 18630972 18631032 -84863942 + GA-rich Low_complexity Low_complexity 3 62 0 1 727 2534 166 78 2 chr15 18632884 18633343 -84861631 - Lx2 LINE L1 0 6997 6504 1 727 996 274 151 3 chr15 18634227 18634546 -84860428 + ORR1D1 LTR MaLR 7 372 -2 1 727 2194 255 66 18 chr15 18634567 18635170 -84859804 + ORR1D1-int LTR MaLR 24 655 -715 1 727 717 295 56 52 chr15 18635200 18635450 -84859524 - ORR1D-int LTR MaLR -374 996 746 1 727 556 321 46 3 chr15 18635489 18635858 -84859116 + L1M3 LINE L1 4663 5047 -1093 1 727 1938 135 61 79 chr15 18636073 18636466 -84858508 + RLTR9C LTR ERVK 6 391 -2 2 727 438 154 27 55 chr15 18636470 18636580 -84858394 + ETnERV2-int LTR ERVK 2 108 -4736 2 727 277 301 53 47 chr15 18636618 18636789 -84858185 + ETnERV2-int LTR ERVK 201 372 -2942 2 727 1167 179 111 57 chr15 18636788 18636908 -84858066 + ETnERV2-int LTR ERVK 1090 1196 -6210 2 727 4346 73 2 12 chr15 18636908 18637478 -84857496 - LTRIS2 LTR ERV1 0 564 1 2 727 1167 179 111 57 chr15 18637478 18637689 -84857285 + ETnERV2-int LTR ERVK 1197 1438 -5968 2 727 30835 139 8 3 chr15 18637689 18639273 -84855701 + L1Md_F2 LINE L1 446 1977 -3906 2 727 195 69 0 0 chr15 18639273 18639302 -84855672 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2 727 30835 84 9 2 chr15 18639302 18640792 -84854182 + L1Md_F2 LINE L1 1978 3476 -2407 2 727 291 28 0 0 chr15 18640792 18640828 -84854146 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 2 727 30835 84 9 2 chr15 18640828 18642919 -84852055 + L1Md_F2 LINE L1 3477 5584 -299 2 727 7398 83 0 2 chr15 18642920 18643904 -84851070 + L1Md_F2 LINE L1 5587 6568 -14 2 727 1104 85 0 0 chr15 18643951 18644104 -84850870 + (GAAAA)n Simple_repeat Simple_repeat 5 157 0 2 727 2534 175 97 10 chr15 18644104 18644704 -84850270 + ETnERV2-int LTR ERVK 1434 2085 -5321 2 727 4042 198 34 40 chr15 18644732 18647533 -84847441 + ETnERV2-int LTR ERVK 2356 6422 -984 2 727 514 83 0 0 chr15 18647750 18647822 -84847152 + ETnERV2-int LTR ERVK 7331 7402 -4 2 727 2161 125 55 75 chr15 18647829 18648228 -84846746 + RLTR9C LTR ERVK 1 391 -2 2 727 252 369 68 20 chr15 18648339 18648632 -84846342 + L1M3 LINE L1 5458 5764 -407 2 727 31 44 0 0 chr15 18648690 18648735 -84846239 + AT_rich Low_complexity Low_complexity 1 45 0 2 727 441 0 0 0 chr15 18649068 18649117 -84845857 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 2 727 785 87 9 0 chr15 18649369 18649484 -84845490 + (GAAA)n Simple_repeat Simple_repeat 2 117 0 2 727 823 195 134 28 chr15 18649887 18650304 -84844670 - RMER3D-int LTR ERVK -2006 836 353 2 727 2724 83 31 24 chr15 18650692 18651110 -84843864 - BGLII LTR ERVK 0 421 1 2 727 387 358 60 12 chr15 18651111 18651278 -84843696 + B4A SINE B4 110 284 -8 2 727 225 0 0 0 chr15 18651334 18651359 -84843615 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 727 297 311 88 35 chr15 18653477 18653675 -84841299 - ORR1C1 LTR MaLR -144 230 1 2 727 1560 191 111 3 chr15 18654194 18654509 -84840465 - RMER6D LTR ERVK -4 716 368 2 727 2072 165 14 3 chr15 18654510 18654881 -84840093 - Lx4A LINE L1 -901 6157 5783 2 727 40375 16 1 6 chr15 18654904 18661263 -84833711 - L1Md_A LINE L1 0 6582 260 2 727 459 172 0 21 chr15 18661265 18661360 -84833614 - Lx4A LINE L1 -1255 5803 5711 2 727 350 301 198 31 chr15 18661399 18661591 -84833383 + RMER15 LTR ERVL 337 560 -15 2 727 215 200 0 0 chr15 18661913 18661948 -84833026 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 727 32 0 0 0 chr15 18662200 18662232 -84832742 + AT_rich Low_complexity Low_complexity 1 32 0 2 727 21 0 0 0 chr15 18662813 18662834 -84832140 + AT_rich Low_complexity Low_complexity 1 21 0 2 727 1627 92 70 4 chr15 18663281 18663522 -84831452 + Lx3A LINE L1 6673 6929 -52 2 727 204 40 0 0 chr15 18663547 18663572 -84831402 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 727 279 0 0 0 chr15 18663754 18663785 -84831189 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 2 727 304 328 40 24 chr15 18665330 18665455 -84829519 + L2 LINE L2 1965 2091 -1328 2 727 504 125 0 0 chr15 18665534 18665630 -84829344 + (TAGA)n Simple_repeat Simple_repeat 1 96 0 2 727 23 68 0 0 chr15 18665800 18665844 -84829130 + AT_rich Low_complexity Low_complexity 1 44 0 2 727 236 175 0 0 chr15 18666839 18666879 -84828095 - Lx2 LINE L1 -419 6578 6539 2 727 2410 140 47 2 chr15 18666879 18667280 -84827694 + Lx2 LINE L1 6578 6996 -1 2 727 185 355 40 0 chr15 18667944 18668020 -84826954 - L3 LINE CR1 -57 4432 4354 2 727 261 358 37 0 chr15 18669422 18669531 -84825443 + Lx8 LINE L1 7065 7177 -296 2 727 237 350 60 36 chr15 18670259 18670425 -84824549 - L2 LINE L2 -1855 1564 1395 2 727 27 0 0 0 chr15 18670499 18670526 -84824448 + AT_rich Low_complexity Low_complexity 1 27 0 2 727 256 345 23 0 chr15 18671520 18671607 -84823367 - L3 LINE CR1 -4393 96 8 2 727 21 0 0 0 chr15 18671924 18671945 -84823029 + AT_rich Low_complexity Low_complexity 1 21 0 2 727 21 0 0 0 chr15 18672851 18672872 -84822102 + AT_rich Low_complexity Low_complexity 1 21 0 2 727 31 0 0 0 chr15 18672886 18672917 -84822057 + AT_rich Low_complexity Low_complexity 1 31 0 2 727 505 232 9 22 chr15 18673033 18673181 -84821793 + Lx7 LINE L1 5714 5861 -721 2 727 1489 284 119 58 chr15 18675843 18676657 -84818317 - Lx9 LINE L1 0 7644 6781 2 727 2213 108 6 9 chr15 18676657 18676993 -84817981 + Lx3_Mus LINE L1 6675 7009 0 2 727 215 200 0 0 chr15 18677108 18677143 -84817831 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 727 913 335 87 67 chr15 18677548 18678206 -84816768 + MER44D DNA MER2_type 29 699 -6 2 727 23 33 0 0 chr15 18679749 18679779 -84815195 + AT_rich Low_complexity Low_complexity 1 30 0 2 727 231 184 0 0 chr15 18679843 18679881 -84815093 + polypyrimidine Low_complexity Low_complexity 3 40 0 2 727 366 123 0 0 chr15 18679881 18679938 -84815036 + (TC)n Simple_repeat Simple_repeat 2 58 0 2 727 239 180 0 92 chr15 18679970 18680068 -84814906 + A-rich Low_complexity Low_complexity 2 90 0 2 727 1152 306 54 7 chr15 18680079 18680520 -84814454 - Lx7 LINE L1 -394 7302 6841 2 727 287 0 0 0 chr15 18680525 18680568 -84814406 - L1Md_A LINE L1 0 6582 6540 2 727 308 280 23 39 chr15 18680568 18680698 -84814276 - Lx7 LINE L1 -853 6843 6716 2 727 520 315 7 27 chr15 18681749 18681896 -84813078 - B1_Mur1 SINE Alu 0 149 6 2 727 432 0 0 0 chr15 18681935 18681983 -84812991 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 727 255 215 39 97 chr15 18682172 18682275 -84812699 - Tigger7 DNA MER2_type -90 2401 2305 2 727 221 0 35 0 chr15 18682407 18682436 -84812538 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 2 727 303 346 96 19 chr15 18682535 18682824 -84812150 - MLT1A1 LTR MaLR -38 370 8 2 727 24 32 0 0 chr15 18683098 18683129 -84811845 + AT_rich Low_complexity Low_complexity 1 31 0 2 727 298 288 0 0 chr15 18683696 18683769 -84811205 + (CA)n Simple_repeat Simple_repeat 1 73 0 2 727 1916 219 38 15 chr15 18684065 18684542 -84810432 - L1_Mur3 LINE L1 -1739 4141 3654 2 727 3574 231 73 19 chr15 18684562 18686064 -84808910 + Lx6 LINE L1 5169 6750 -710 2 727 28 0 0 0 chr15 18686064 18686092 -84808882 + AT_rich Low_complexity Low_complexity 1 28 0 2 727 6776 179 55 20 chr15 18686120 18687460 -84807514 - Lx4A LINE L1 -1 7057 5671 2 727 1098 88 0 0 chr15 18687473 18687620 -84807354 + B1_Mm SINE Alu 1 147 0 2 727 540 81 0 0 chr15 18687622 18687696 -84807278 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 2 727 603 167 0 0 chr15 18687720 18687822 -84807152 - Lx4A LINE L1 -822 5055 4954 2 727 3948 138 8 3 chr15 18687824 18688477 -84806497 + L1_Mur2 LINE L1 3774 4429 -1448 2 727 637 155 0 0 chr15 18688472 18688569 -84806405 + Lx6 LINE L1 6776 6872 -824 2 727 462 159 0 0 chr15 18688569 18688657 -84806317 + GA-rich Low_complexity Low_complexity 2 89 0 2 727 579 234 26 119 chr15 18688657 18688851 -84806123 + Lx6 LINE L1 6893 7068 -628 2 727 457 305 30 12 chr15 18688829 18688995 -84805979 + Lx6 LINE L1 7102 7270 -190 2 727 1006 140 6 6 chr15 18689599 18689779 -84805195 + GA-rich Low_complexity Low_complexity 1 180 0 2 727 210 71 0 0 chr15 18690679 18690707 -84804267 + (A)n Simple_repeat Simple_repeat 1 28 0 2 727 243 0 0 0 chr15 18690841 18690868 -84804106 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 727 540 0 0 0 chr15 18690868 18690927 -84804047 + (GA)n Simple_repeat Simple_repeat 2 61 0 2 727 184 365 16 16 chr15 18692582 18692646 -84802328 + L2a LINE L2 3343 3406 -20 2 727 336 337 62 101 chr15 18693019 18693326 -84801648 - MLT1K LTR MaLR -115 480 186 2 727 248 333 76 20 chr15 18695111 18695362 -84799612 - L1ME2 LINE L1 -18 6146 5882 2 727 285 284 106 57 chr15 18695481 18695604 -84799370 - B3 SINE B2 -1 215 87 2 727 32 26 0 0 chr15 18696530 18696569 -84798405 + AT_rich Low_complexity Low_complexity 1 39 0 2 727 6378 126 16 38 chr15 18696571 18697667 -84797307 - Lx3A LINE L1 -8 6973 5902 2 727 305 320 124 42 chr15 18697684 18698014 -84796960 - L1MC2 LINE L1 -163 7622 7266 2 727 280 344 16 21 chr15 18698188 18698378 -84796596 - L1MC2 LINE L1 -718 7067 6879 2 727 959 270 62 20 chr15 18698403 18698803 -84796171 - L1MC2 LINE L1 -13 6331 5915 2 727 290 317 20 10 chr15 18698875 18698977 -84795997 + MTEb LTR MaLR 20 122 -257 2 727 3256 214 36 2 chr15 18698977 18699501 -84795473 + Lx5 LINE L1 6393 6927 -123 2 727 519 17 0 0 chr15 18699501 18699561 -84795413 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 727 3256 214 36 2 chr15 18699561 18699669 -84795305 + Lx5 LINE L1 6928 7046 -4 2 727 666 283 134 28 chr15 18699675 18699922 -84795052 + MTEb LTR MaLR 101 373 -6 2 727 554 267 26 7 chr15 18700270 18700421 -84794553 - B3 SINE B2 -3 213 60 2 727 203 0 0 36 chr15 18700550 18700578 -84794396 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2 727 35 0 0 0 chr15 18700733 18700768 -84794206 + AT_rich Low_complexity Low_complexity 1 35 0 2 727 265 340 62 21 chr15 18700843 18700987 -84793987 - L1MC3 LINE L1 -933 6852 6703 2 727 1044 239 100 70 chr15 18701914 18702243 -84792731 - Lx6 LINE L1 -3 7457 7119 2 727 429 305 84 13 chr15 18702337 18702563 -84792411 - L1MCa LINE L1 -4616 1892 1651 2 727 522 332 121 28 chr15 18702886 18703126 -84791848 - L1M2 LINE L1 -1460 5385 5148 2 727 1900 115 14 0 chr15 18703126 18703414 -84791560 + Lx2B LINE L1 6709 7000 0 2 727 522 332 121 28 chr15 18703414 18704258 -84790716 - L1M2 LINE L1 -1698 5147 4202 2 727 1126 44 12 25 chr15 18704268 18704431 -84790543 - L1Md_F3 LINE L1 0 6584 6424 2 727 2079 24 48 0 chr15 18704431 18704681 -84790293 + L1Md_F3 LINE L1 6155 6416 -168 2 727 519 258 85 37 chr15 18704687 18704981 -84789993 - L1M2 LINE L1 -2644 4201 3894 2 727 38 39 0 0 chr15 18704981 18705033 -84789941 + AT_rich Low_complexity Low_complexity 1 52 0 2 727 329 286 66 16 chr15 18705092 18705213 -84789761 - B3 SINE B2 0 216 90 2 727 260 265 10 0 chr15 18705258 18705356 -84789618 - L1M2 LINE L1 -3014 3831 3733 2 727 5235 122 19 19 chr15 18705486 18706331 -84788643 - L1_Mus1 LINE L1 -2 6565 5721 2 727 679 310 108 29 chr15 18706442 18706721 -84788253 + ORR1E LTR MaLR 58 358 -1 2 727 252 215 15 0 chr15 18706781 18706846 -84788128 - L1M2 LINE L1 -4490 2359 2294 2 727 1083 281 82 39 chr15 18707266 18707732 -84787242 + RLTR40 LTR ERVK 281 766 -51 2 727 341 258 57 89 chr15 18707779 18707957 -84787017 + MLT1D LTR MaLR 13 193 -434 2 727 277 277 35 24 chr15 18708496 18708581 -84786393 + B1_Mur2 SINE Alu 63 148 -1 2 727 23 0 0 0 chr15 18709359 18709382 -84785592 + AT_rich Low_complexity Low_complexity 1 23 0 2 727 35 54 0 0 chr15 18709441 18709497 -84785477 + AT_rich Low_complexity Low_complexity 1 56 0 2 727 997 320 40 20 chr15 18710636 18711035 -84783939 + Lx8 LINE L1 6827 7233 -240 2 727 429 20 0 0 chr15 18711062 18711112 -84783862 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 727 288 0 0 0 chr15 18711112 18711143 -84783831 + (GA)n Simple_repeat Simple_repeat 2 33 0 2 727 23 33 0 0 chr15 18711544 18711574 -84783400 + AT_rich Low_complexity Low_complexity 1 30 0 2 727 555 16 0 0 chr15 18712164 18712228 -84782746 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 727 186 43 0 0 chr15 18712353 18712376 -84782598 + (TTGG)n Simple_repeat Simple_repeat 2 24 0 3 727 32816 102 13 7 chr15 18713477 18719432 -84775542 + L1Md_F2 LINE L1 42 6038 -544 3 727 5996 72 0 14 chr15 18719432 18720232 -84774742 + L1_Mus1 LINE L1 5778 6566 -1 3 727 2177 93 26 0 chr15 18721737 18722049 -84772925 + Lx3_Mus LINE L1 6682 7001 -8 3 727 253 256 133 0 chr15 18722138 18722228 -84772746 - MTE2b LTR MaLR -4 375 274 3 727 388 298 179 31 chr15 18722457 18722748 -84772226 - MTE-int LTR MaLR -54 1526 1193 3 727 2675 102 0 8 chr15 18722813 18723210 -84771764 + MTB LTR MaLR 1 394 -6 3 727 748 325 35 89 chr15 18723396 18723801 -84771173 - MTE-int LTR MaLR -1131 449 67 3 727 7829 57 8 0 chr15 18723820 18725425 -84769549 - L1Md_F3 LINE L1 -14 6570 4953 3 727 6871 42 0 2 chr15 18725420 18726272 -84768702 + L1Md_F3 LINE L1 4110 4959 -924 3 727 620 261 7 0 chr15 18727708 18727846 -84767128 - Lx5 LINE L1 -622 6428 6290 3 727 1266 312 43 41 chr15 18727845 18728263 -84766711 + Lx5 LINE L1 6615 7033 -17 3 727 192 77 0 0 chr15 18728268 18728294 -84766680 + (ATG)n Simple_repeat Simple_repeat 2 27 0 3 727 335 227 32 29 chr15 18728397 18728541 -84766433 + MLT2C2 LTR ERVL 82 221 -335 3 727 192 25 73 24 chr15 18728892 18728933 -84766041 + (CAAA)n Simple_repeat Simple_repeat 4 46 0 3 727 360 370 48 22 chr15 18729285 18729553 -84765421 + L1MCa LINE L1 861 1135 -5373 3 727 732 33 0 0 chr15 18729568 18729659 -84765315 + (GGAA)n Simple_repeat Simple_repeat 2 92 0 3 727 1113 218 9 0 chr15 18729764 18729980 -84764994 + URR1B DNA MER1_type 8 225 0 3 727 440 335 35 30 chr15 18730010 18730207 -84764767 + B3A SINE B2 19 216 0 3 727 393 301 30 68 chr15 18730222 18730518 -84764456 + L1MA9 LINE L1 4993 5277 -866 3 727 370 331 91 18 chr15 18730550 18730836 -84764138 + L1MA9 LINE L1 5571 5877 -435 3 727 545 272 91 42 chr15 18730853 18730980 -84763994 - MTC LTR MaLR -13 408 269 3 727 1602 160 29 65 chr15 18730980 18731321 -84763653 + ORR1A4 LTR MaLR 1 329 0 3 727 545 272 91 42 chr15 18731321 18731358 -84763616 - MTC LTR MaLR -153 268 236 3 727 2160 274 51 121 chr15 18731361 18732037 -84762937 + L1_Mur3 LINE L1 47 648 -5229 3 727 551 169 53 20 chr15 18732037 18732165 -84762809 + ORR1A3 LTR MaLR 152 284 -62 3 727 2160 274 51 121 chr15 18732165 18733043 -84761931 + L1_Mur3 LINE L1 649 1432 -4445 3 727 218 95 46 31 chr15 18733051 18733116 -84761858 + (CAAA)n Simple_repeat Simple_repeat 1 66 0 3 727 7857 190 187 50 chr15 18733327 18734985 -84759989 - L1_Mur3 LINE L1 -856 5024 3144 3 727 354 45 0 0 chr15 18734985 18735029 -84759945 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 3 727 7857 190 187 50 chr15 18735029 18735835 -84759139 - L1_Mur3 LINE L1 -2737 3143 2222 3 727 589 183 54 23 chr15 18736476 18736605 -84758369 - B1_Mur3 SINE Alu -12 137 5 3 727 492 352 39 54 chr15 18736727 18736931 -84758043 - B3A SINE B2 -13 203 3 3 727 23 0 0 0 chr15 18737112 18737135 -84757839 + AT_rich Low_complexity Low_complexity 1 23 0 3 727 580 153 15 0 chr15 18737633 18737770 -84757204 + (TCTA)n Simple_repeat Simple_repeat 4 142 0 3 727 182 333 53 43 chr15 18738250 18738344 -84756630 + L2a LINE L2 3288 3382 -44 3 727 225 302 70 0 chr15 18738650 18738736 -84756238 - MER45A DNA Tip100 -33 145 54 3 727 308 94 0 19 chr15 18738797 18738851 -84756123 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 3 727 22 0 0 0 chr15 18738883 18738905 -84756069 + AT_rich Low_complexity Low_complexity 1 22 0 3 727 185 65 32 0 chr15 18738907 18738938 -84756036 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 3 727 190 351 52 0 chr15 18739665 18739742 -84755232 - MER5A DNA MER1_type -50 139 59 3 727 951 238 40 40 chr15 18740104 18740402 -84754572 - RLTR11A2 LTR ERVK -15 512 215 3 727 306 270 11 33 chr15 18740384 18740476 -84754498 - RLTR11A2 LTR ERVK -438 90 1 3 727 475 340 0 65 chr15 18740497 18740745 -84754229 + MT2A LTR ERVL 188 419 -114 3 727 818 129 22 0 chr15 18740774 18740913 -84754061 - URR1A DNA MER1_type -4 222 81 3 727 245 322 0 0 chr15 18741406 18741465 -84753509 + RMER15 LTR ERVL 1 59 -516 3 727 1836 251 2 73 chr15 18741518 18741639 -84753335 + RMER15 LTR ERVL 38 150 -425 3 727 267 31 0 0 chr15 18741639 18741671 -84753303 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 727 1836 251 2 73 chr15 18741671 18742044 -84752930 + RMER15 LTR ERVL 151 497 -78 3 727 503 339 56 6 chr15 18742460 18742784 -84752190 + L1MA7 LINE L1 5557 5896 -395 3 90 342 364 66 29 chr15 18743258 18743551 -84751423 + LTR40a LTR ERVL 190 452 -13 3 728 459 0 0 0 chr15 18744390 18744441 -84750533 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 728 21 0 0 0 chr15 18745226 18745247 -84749727 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 30 27 0 0 chr15 18745402 18745439 -84749535 + AT_rich Low_complexity Low_complexity 1 37 0 3 728 189 0 0 0 chr15 18747249 18747270 -84747704 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 3 728 189 107 0 0 chr15 18747276 18747304 -84747670 + (TTG)n Simple_repeat Simple_repeat 2 29 0 3 728 222 128 0 0 chr15 18748211 18748250 -84746724 + (T)n Simple_repeat Simple_repeat 1 39 0 3 728 249 33 0 0 chr15 18748608 18748638 -84746336 + (GA)n Simple_repeat Simple_repeat 2 31 0 3 728 30 0 0 0 chr15 18748940 18748970 -84746004 + AT_rich Low_complexity Low_complexity 1 30 0 3 728 242 243 28 14 chr15 18749009 18749080 -84745894 + Charlie7 DNA MER1_type 2002 2073 -539 3 728 21 36 0 0 chr15 18749914 18749942 -84745032 + AT_rich Low_complexity Low_complexity 1 28 0 3 728 198 0 0 0 chr15 18750483 18750505 -84744469 + (T)n Simple_repeat Simple_repeat 1 22 0 3 728 387 0 0 0 chr15 18751024 18751067 -84743907 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 3 728 477 0 0 0 chr15 18752858 18752911 -84742063 + (TATG)n Simple_repeat Simple_repeat 2 54 0 3 728 197 254 0 14 chr15 18753100 18753172 -84741802 + CT-rich Low_complexity Low_complexity 2 72 0 3 728 571 307 97 12 chr15 18754155 18754320 -84740654 + B3 SINE B2 4 182 -34 3 728 2033 67 32 3 chr15 18754896 18755179 -84739795 - L1_Mus3 LINE L1 -7 6631 6341 3 728 306 270 0 0 chr15 18755435 18755509 -84739465 - ID_B1 SINE B4 -24 200 127 3 728 398 288 32 58 chr15 18755599 18755754 -84739220 - RSINE1 SINE B4 0 165 15 3 728 303 318 54 65 chr15 18755853 18755980 -84738994 - Lx9 LINE L1 -20 7624 7512 3 728 276 30 0 0 chr15 18755980 18756013 -84738961 + (CATA)n Simple_repeat Simple_repeat 1 33 0 3 728 303 318 54 65 chr15 18756013 18756164 -84738810 - Lx9 LINE L1 -133 7511 7349 3 728 435 256 175 19 chr15 18756249 18756460 -84738514 - Lx9 LINE L1 -432 7212 6969 3 728 436 317 66 0 chr15 18756620 18756803 -84738171 - Lx8 LINE L1 -214 7259 7065 3 728 195 49 73 0 chr15 18756826 18756867 -84738107 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 3 728 3028 100 0 18 chr15 18756908 18757366 -84737608 - L1_Mus3 LINE L1 0 6638 6189 3 728 797 186 11 0 chr15 18757466 18757643 -84737331 + CT-rich Low_complexity Low_complexity 2 180 0 3 728 414 0 0 0 chr15 18757654 18757700 -84737274 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 728 309 274 42 58 chr15 18757737 18757857 -84737117 - B1_Mur2 SINE Alu -11 138 21 3 728 21 0 0 0 chr15 18757870 18757891 -84737083 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 263 71 24 0 chr15 18758004 18758046 -84736928 + (GAAA)n Simple_repeat Simple_repeat 4 46 0 3 728 214 344 50 40 chr15 18758942 18759042 -84735932 - B1F1 SINE Alu -48 101 1 3 728 204 339 195 0 chr15 18759893 18760011 -84734963 + MIR SINE MIR 20 160 -102 3 728 21 36 0 0 chr15 18760108 18760136 -84734838 + AT_rich Low_complexity Low_complexity 1 28 0 3 728 195 42 0 0 chr15 18760176 18760200 -84734774 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 3 728 24 0 0 0 chr15 18760253 18760277 -84734697 + AT_rich Low_complexity Low_complexity 1 24 0 3 728 26 30 0 0 chr15 18762402 18762435 -84732539 + AT_rich Low_complexity Low_complexity 1 33 0 3 728 21 0 0 0 chr15 18762851 18762872 -84732102 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 516 179 239 0 chr15 18765074 18765191 -84729783 - B1_Mus2 SINE Alu -3 145 1 3 728 12401 1 0 0 chr15 18765596 18767673 -84727301 - L1Md_A LINE L1 0 6582 4506 3 728 666 202 22 4 chr15 18767974 18768198 -84726776 + CT-rich Low_complexity Low_complexity 1 228 0 3 728 183 129 0 0 chr15 18768198 18768229 -84726745 + (TC)n Simple_repeat Simple_repeat 1 31 0 3 728 274 241 38 0 chr15 18768229 18768308 -84726666 - Lx9 LINE L1 -11 7633 7552 3 728 186 71 0 0 chr15 18768309 18768337 -84726637 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 728 291 54 0 0 chr15 18768340 18768377 -84726597 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 728 370 221 37 28 chr15 18768382 18768489 -84726485 - Lx9 LINE L1 -179 7465 7358 3 728 304 268 26 66 chr15 18769725 18769877 -84725097 - Lx8 LINE L1 -351 7122 6977 3 728 21 0 0 0 chr15 18770308 18770329 -84724645 + AT_rich Low_complexity Low_complexity 1 21 0 3 728 186 71 0 0 chr15 18770794 18770822 -84724152 + (A)n Simple_repeat Simple_repeat 1 28 0 3 728 771 42 0 0 chr15 18771379 18771474 -84723500 + (TTCC)n Simple_repeat Simple_repeat 4 98 0 3 728 519 69 0 0 chr15 18771474 18771546 -84723428 + (TC)n Simple_repeat Simple_repeat 2 73 0 3 728 1892 132 34 46 chr15 18771547 18771897 -84723077 - Lx2B LINE L1 -12 6988 6643 3 728 1482 124 18 4 chr15 18771897 18772123 -84722851 + Lx2B LINE L1 6421 6649 -351 3 728 1126 196 183 124 chr15 18772925 18773450 -84721524 - Lx9 LINE L1 -7 7637 7082 3 728 30 59 0 0 chr15 18773540 18773591 -84721383 + AT_rich Low_complexity Low_complexity 1 51 0 3 728 191 114 0 28 chr15 18775181 18775217 -84719757 + (TTTTC)n Simple_repeat Simple_repeat 5 39 0 3 728 21 57 0 0 chr15 18775312 18775347 -84719627 + AT_rich Low_complexity Low_complexity 1 35 0 3 728 351 0 0 0 chr15 18776064 18776103 -84718871 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 728 432 0 0 0 chr15 18776103 18776150 -84718824 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 728 909 280 169 9 chr15 18776288 18776542 -84718432 - Lx8 LINE L1 -242 7231 6951 3 728 477 0 0 0 chr15 18776542 18776595 -84718379 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 728 909 280 169 9 chr15 18776595 18776783 -84718191 - Lx8 LINE L1 -523 6950 6719 3 728 276 244 85 0 chr15 18776937 18777019 -84717955 + Lx8 LINE L1 6200 6288 -1185 3 728 21 57 0 0 chr15 18777026 18777061 -84717913 + AT_rich Low_complexity Low_complexity 1 35 0 4 728 210 128 0 0 chr15 18777302 18777341 -84717633 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 728 1738 323 107 33 chr15 18777356 18778414 -84716560 - Lx9 LINE L1 -174 7470 6198 4 728 390 91 0 0 chr15 18778414 18778469 -84716505 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 728 1052 310 61 28 chr15 18778469 18779123 -84715851 - Lx9 LINE L1 -1276 6197 5491 4 728 424 240 57 16 chr15 18779127 18779250 -84715724 + Lx8 LINE L1 6276 6403 -1070 3 728 3199 173 84 6 chr15 18779258 18779892 -84715082 - RMER6C LTR ERVK -7 683 1 4 728 21 57 0 0 chr15 18780870 18780905 -84714069 + AT_rich Low_complexity Low_complexity 1 35 0 4 728 192 258 87 58 chr15 18781529 18781632 -84713342 + L3 LINE CR1 3527 3632 -857 4 728 251 320 27 0 chr15 18781985 18782060 -84712914 - ID4_ SINE ID -5 78 2 4 728 523 353 107 58 chr15 18782224 18782792 -84712182 - MLT-int LTR MaLR 0 1735 1140 4 728 34 96 0 0 chr15 18783347 18783451 -84711523 + AT_rich Low_complexity Low_complexity 1 104 0 4 728 573 339 16 0 chr15 18784204 18784390 -84710584 - ID_B1 SINE B4 -15 209 21 4 728 1390 229 91 29 chr15 18786123 18786514 -84708460 + MTD LTR MaLR 3 405 -14 4 728 215 93 0 23 chr15 18786636 18786680 -84708294 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 728 2952 70 3 3 chr15 18788923 18789307 -84705667 - L1_Mus1 LINE L1 -1 6566 6183 4 728 4955 131 100 31 chr15 18789322 18790199 -84704775 - Lx3B LINE L1 0 6973 6036 4 728 531 259 20 3 chr15 18790373 18790518 -84704456 + B3A SINE B2 4 159 -57 4 728 435 52 0 0 chr15 18790518 18790576 -84704398 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 728 683 24 12 0 chr15 18790576 18790661 -84704313 + (GA)n Simple_repeat Simple_repeat 1 86 0 4 728 513 335 5 55 chr15 18791634 18791833 -84703141 + MER20 DNA MER1_type 24 212 -7 4 728 27 0 0 0 chr15 18791957 18791984 -84702990 + AT_rich Low_complexity Low_complexity 1 27 0 4 728 202 42 0 0 chr15 18792762 18792786 -84702188 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 728 504 235 0 0 chr15 18792786 18792922 -84702052 + (TA)n Simple_repeat Simple_repeat 2 137 0 4 728 693 148 44 7 chr15 18793086 18793222 -84701752 + URR1A DNA MER1_type 80 220 -6 4 728 646 168 23 85 chr15 18793416 18793592 -84701382 + Lx3B LINE L1 6783 6947 -26 4 728 498 108 0 0 chr15 18793618 18793692 -84701282 + (GGA)n Simple_repeat Simple_repeat 3 76 0 4 728 2198 217 112 14 chr15 18793810 18794328 -84700646 - Lx9 LINE L1 -667 6977 6405 4 728 868 188 81 19 chr15 18794328 18794539 -84700435 + URR1B DNA MER1_type 2 225 0 4 728 2198 217 112 14 chr15 18794539 18794571 -84700403 - Lx9 LINE L1 -1240 6404 6373 4 728 297 316 29 43 chr15 18795744 18795883 -84699091 - RSINE1 SINE B4 0 165 29 4 728 338 386 43 9 chr15 18797351 18797466 -84697508 + B3A SINE B2 49 167 -31 4 728 246 116 0 0 chr15 18797508 18797551 -84697423 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 728 3631 134 17 3 chr15 18797596 18798186 -84696788 + Lx3A LINE L1 6370 6967 -14 4 728 585 0 0 0 chr15 18798187 18798252 -84696722 + (GAAA)n Simple_repeat Simple_repeat 2 66 0 4 728 245 325 35 11 chr15 18798415 18798502 -84696472 + MIR SINE MIR 54 142 -120 4 728 277 269 63 27 chr15 18800838 18800949 -84694025 + MTC LTR MaLR 1 115 -281 4 728 4637 84 3 0 chr15 18800949 18801600 -84693374 - L1Md_F2 LINE L1 -3436 2447 1795 4 728 22838 76 2 1 chr15 18801600 18804673 -84690301 + L1Md_F2 LINE L1 2510 5586 -297 4 728 7990 52 2 0 chr15 18804673 18805667 -84689307 + L1Md_F2 LINE L1 5587 6582 0 4 728 1366 220 64 47 chr15 18805690 18806033 -84688941 + MTC LTR MaLR 73 421 0 4 728 22 0 0 0 chr15 18806156 18806178 -84688796 + AT_rich Low_complexity Low_complexity 1 22 0 4 728 602 297 45 79 chr15 18806238 18806839 -84688135 + L1MA5A LINE L1 4014 4582 -1558 4 728 343 310 25 82 chr15 18806867 18807025 -84687949 + B1_Mur1 SINE Alu 1 149 0 4 728 860 298 118 30 chr15 18807121 18808118 -84686856 + L1MA5A LINE L1 4802 5939 -358 4 728 333 284 102 22 chr15 18808627 18808764 -84686210 + B4 SINE B4 110 257 -35 4 728 23 0 0 0 chr15 18809314 18809337 -84685637 + AT_rich Low_complexity Low_complexity 1 23 0 4 728 1026 107 0 0 chr15 18809481 18809688 -84685286 + (TG)n Simple_repeat Simple_repeat 1 207 0 4 728 750 225 35 6 chr15 18810104 18810278 -84684696 + URR1A DNA MER1_type 43 221 -5 4 728 1117 56 42 0 chr15 18810336 18810478 -84684496 + B1_Mus1 SINE Alu 1 148 0 4 728 28 79 0 0 chr15 18810805 18810868 -84684106 + AT_rich Low_complexity Low_complexity 1 63 0 4 728 447 19 0 0 chr15 18811610 18811662 -84683312 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 728 221 109 22 0 chr15 18811671 18811717 -84683257 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 4 728 306 0 0 0 chr15 18811980 18812014 -84682960 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 728 372 334 134 65 chr15 18812697 18813420 -84681554 - L1ME1 LINE L1 -28 6151 5379 4 728 203 138 0 0 chr15 18813478 18813507 -84681467 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 728 452 270 16 43 chr15 18813831 18813966 -84681008 - B1F SINE Alu 0 149 13 4 728 326 307 62 66 chr15 18814020 18814247 -84680727 - L1MC LINE L1 -895 5251 5026 4 728 561 322 36 36 chr15 18814337 18814672 -84680302 + Lx9 LINE L1 7155 7489 -155 4 728 31 26 0 0 chr15 18814793 18814831 -84680143 + AT_rich Low_complexity Low_complexity 1 38 0 4 728 4204 162 41 1 chr15 18815195 18815928 -84679046 - Lx LINE L1 0 6654 5893 4 728 1793 152 12 64 chr15 18815951 18816295 -84678679 - ORR1A3 LTR MaLR 0 326 1 4 728 561 99 0 0 chr15 18816369 18816450 -84678524 + (CA)n Simple_repeat Simple_repeat 1 81 0 4 728 248 264 0 27 chr15 18816450 18816524 -84678450 + (TATG)n Simple_repeat Simple_repeat 1 72 0 4 728 568 318 106 23 chr15 18818507 18818771 -84676203 - B4A SINE B4 -4 288 3 4 728 23 0 0 0 chr15 18819217 18819240 -84675734 + AT_rich Low_complexity Low_complexity 1 23 0 4 728 22 0 0 0 chr15 18820060 18820082 -84674892 + AT_rich Low_complexity Low_complexity 1 22 0 4 728 245 197 16 0 chr15 18820667 18820728 -84674246 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 4 728 270 0 0 0 chr15 18820998 18821028 -84673946 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 4 728 37 0 0 0 chr15 18821316 18821353 -84673621 + AT_rich Low_complexity Low_complexity 1 37 0 4 728 256 77 39 0 chr15 18821375 18821427 -84673547 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 4 728 1921 149 14 53 chr15 18821891 18822309 -84672665 - MTB_Mm LTR MaLR 0 407 6 4 728 216 0 0 0 chr15 18822345 18822369 -84672605 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 4 728 6275 35 7 10 chr15 18822377 18823147 -84671827 - L1Md_F3 LINE L1 -17 6567 5801 4 728 2600 113 0 8 chr15 18824399 18824799 -84670175 + L1_Mus4 LINE L1 6240 6636 0 4 728 242 29 29 0 chr15 18824960 18824995 -84669979 + (GA)n Simple_repeat Simple_repeat 2 37 0 4 728 4183 97 5 13 chr15 18825227 18825843 -84669131 - L1_Mus3 LINE L1 -3 6635 6025 4 728 794 331 54 16 chr15 18826473 18826731 -84668243 + B4A SINE B4 3 270 -22 4 728 21 57 0 0 chr15 18826909 18826944 -84668030 + AT_rich Low_complexity Low_complexity 1 35 0 4 728 21 57 0 0 chr15 18827782 18827817 -84667157 + AT_rich Low_complexity Low_complexity 1 35 0 4 728 29 28 0 0 chr15 18827922 18827958 -84667016 + AT_rich Low_complexity Low_complexity 1 36 0 4 728 219 348 26 18 chr15 18828441 18828555 -84666419 - L2 LINE L2 -681 2738 2624 4 728 21 36 0 0 chr15 18829134 18829162 -84665812 + AT_rich Low_complexity Low_complexity 1 28 0 4 728 231 36 0 0 chr15 18829198 18829226 -84665748 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 4 728 22 56 0 0 chr15 18829907 18829943 -84665031 + AT_rich Low_complexity Low_complexity 1 36 0 4 728 188 286 0 45 chr15 18830596 18830662 -84664312 + L2a LINE L2 3293 3355 -71 4 728 254 161 16 82 chr15 18831038 18831099 -84663875 - ORR1D1 LTR MaLR -11 359 303 4 728 1578 83 50 38 chr15 18831099 18831364 -84663610 + L1_Mus2 LINE L1 6308 6566 0 4 728 581 269 120 5 chr15 18831382 18831591 -84663383 - ORR1D1 LTR MaLR -140 234 2 4 728 252 0 0 0 chr15 18831770 18831798 -84663176 + (TCTA)n Simple_repeat Simple_repeat 3 30 0 4 728 206 0 0 65 chr15 18832211 18832242 -84662732 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 4 728 964 167 86 0 chr15 18833025 18833199 -84661775 - RMER15 LTR ERVL -2 573 385 4 728 1375 188 37 182 chr15 18833909 18834370 -84660604 - RMER15 LTR ERVL -178 397 4 4 728 1420 231 57 35 chr15 18834624 18835111 -84659863 - RLTR28 LTR ERVL -2 522 1 4 728 1751 143 6 45 chr15 18835354 18835684 -84659290 + Lx3A LINE L1 6665 6981 0 4 728 603 95 29 0 chr15 18836934 18837039 -84657935 + (TC)n Simple_repeat Simple_repeat 2 109 0 4 728 213 188 49 148 chr15 18837428 18837509 -84657465 + MIRc SINE MIR 44 116 -152 4 728 287 170 280 0 chr15 18838009 18838109 -84656865 + Lx9 LINE L1 7512 7639 -5 4 728 738 0 0 0 chr15 18838185 18838267 -84656707 + (AATAG)n Simple_repeat Simple_repeat 4 85 0 4 728 25 51 0 0 chr15 18838473 18838512 -84656462 + AT_rich Low_complexity Low_complexity 1 39 0 4 728 509 306 142 37 chr15 18838937 18840219 -84654755 + L1M3 LINE L1 2743 4158 -1982 4 728 503 220 0 8 chr15 18840219 18840352 -84654622 + (TAGG)n Simple_repeat Simple_repeat 3 134 0 4 728 21 0 0 0 chr15 18840360 18840381 -84654593 + AT_rich Low_complexity Low_complexity 1 21 0 4 728 22 0 0 0 chr15 18841271 18841293 -84653681 + AT_rich Low_complexity Low_complexity 1 22 0 4 728 1634 211 43 33 chr15 18841985 18842353 -84652621 - Lx5 LINE L1 -2 7048 6677 4 728 180 0 0 0 chr15 18842595 18842615 -84652359 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 4 728 5414 69 5 35 chr15 18843390 18844138 -84650836 - L1_Mus2 LINE L1 -6 6560 5835 4 728 291 302 50 93 chr15 18844238 18844377 -84650597 - B1F SINE Alu -13 136 4 4 728 189 74 0 0 chr15 18844676 18844703 -84650271 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 4 728 6961 116 26 28 chr15 18844703 18845832 -84649142 - Lx2 LINE L1 -13 6984 5858 5 728 798 304 56 15 chr15 18846067 18846337 -84648637 + MLT1D LTR MaLR 16 296 -209 5 728 315 0 0 0 chr15 18846858 18846893 -84648081 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 728 313 312 64 11 chr15 18847033 18847127 -84647847 - ID_B1 SINE B4 -38 186 88 5 728 444 226 19 47 chr15 18847583 18847690 -84647284 - PB1D9 SINE Alu -11 109 6 5 728 273 29 0 0 chr15 18848388 18848422 -84646552 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 728 378 57 0 0 chr15 18848422 18848475 -84646499 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 5 728 310 324 217 24 chr15 18849106 18849438 -84645536 - Tigger6a DNA MER2_type -166 917 522 5 728 297 384 54 35 chr15 18849486 18849891 -84645083 - Tigger6a DNA MER2_type -634 449 37 5 728 1081 233 102 69 chr15 18851260 18851726 -84643248 - RMER2 LTR ERV1 -17 550 1 5 728 567 0 0 0 chr15 18852085 18852148 -84642826 + (TTTCC)n Simple_repeat Simple_repeat 3 65 0 5 728 336 102 0 0 chr15 18852163 18852212 -84642762 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 728 279 114 0 0 chr15 18852719 18852763 -84642211 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 728 28 29 0 0 chr15 18853684 18853719 -84641255 + AT_rich Low_complexity Low_complexity 1 35 0 5 728 625 278 0 38 chr15 18853810 18853967 -84641007 - B3A SINE B2 -46 152 2 5 728 219 114 0 0 chr15 18854128 18854163 -84640811 + (T)n Simple_repeat Simple_repeat 1 35 0 5 728 432 311 93 21 chr15 18854636 18854968 -84640006 - L1MA4 LINE L1 -351 5949 5594 5 728 336 252 120 10 chr15 18855258 18855358 -84639616 - PB1D10 SINE Alu -6 111 1 5 728 245 329 14 0 chr15 18855521 18855591 -84639383 + MER63D DNA AcHobo 315 385 -676 5 728 245 320 96 10 chr15 18856615 18856719 -84638255 - B1F1 SINE Alu -1 148 36 5 728 243 321 41 77 chr15 18857043 18857212 -84637762 - L1M3 LINE L1 -531 5637 5475 5 728 21 0 0 0 chr15 18857769 18857790 -84637184 + AT_rich Low_complexity Low_complexity 1 21 0 5 728 227 103 26 0 chr15 18858980 18859019 -84635955 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 728 243 204 0 0 chr15 18859674 18859728 -84635246 + T-rich Low_complexity Low_complexity 1 54 0 5 728 2733 130 0 7 chr15 18860404 18860814 -84634160 - MTB_Mm LTR MaLR 0 407 1 5 728 267 302 0 55 chr15 18861833 18861924 -84633050 - B4A SINE B4 -5 287 202 5 728 1481 255 71 11 chr15 18861928 18862308 -84632666 - MTD LTR MaLR -1 418 16 5 728 463 363 77 21 chr15 18862320 18862514 -84632460 - B4A SINE B4 -86 206 2 5 728 486 0 0 0 chr15 18862720 18862774 -84632200 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 728 232 260 20 0 chr15 18862814 18862864 -84632110 + URR1B DNA MER1_type 1 51 -174 5 728 4875 93 13 6 chr15 18862864 18863577 -84631397 - Lx3A LINE L1 -244 6737 6020 5 728 1131 82 0 0 chr15 18863577 18863723 -84631251 - L1_Mur1 LINE L1 -291 5595 5450 5 728 447 19 0 0 chr15 18863943 18863995 -84630979 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 728 252 86 0 0 chr15 18864645 18864680 -84630294 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 728 25 0 0 0 chr15 18865050 18865075 -84629899 + AT_rich Low_complexity Low_complexity 1 25 0 5 728 265 62 42 0 chr15 18865966 18866014 -84628960 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 5 728 4184 186 36 24 chr15 18866076 18866925 -84628049 + RLTR25B LTR ERVK 2 862 -166 5 728 875 66 16 0 chr15 18866925 18867047 -84627927 + (GAAA)n Simple_repeat Simple_repeat 4 127 0 5 728 4184 186 36 24 chr15 18867047 18867062 -84627912 + RLTR25B LTR ERVK 863 875 -153 5 728 216 219 0 0 chr15 18868244 18868285 -84626689 + T-rich Low_complexity Low_complexity 1 41 0 5 728 45 55 0 0 chr15 18868611 18868684 -84626290 + AT_rich Low_complexity Low_complexity 1 73 0 5 728 343 349 46 33 chr15 18868690 18868717 -84626257 + ID_B1 SINE B4 70 217 -2 5 728 369 314 42 8 chr15 18868717 18868836 -84626138 + B1F SINE Alu 20 142 -7 5 728 270 425 56 0 chr15 18868992 18869152 -84625822 - ID_B1 SINE B4 -53 171 3 5 728 35 41 0 0 chr15 18869579 18869628 -84625346 + AT_rich Low_complexity Low_complexity 1 49 0 5 728 324 0 0 0 chr15 18869799 18869835 -84625139 + (TAA)n Simple_repeat Simple_repeat 3 38 0 5 728 207 100 0 0 chr15 18870669 18870699 -84624275 + (GAAAA)n Simple_repeat Simple_repeat 1 30 0 5 728 243 0 0 0 chr15 18870702 18870729 -84624245 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 728 358 0 0 0 chr15 18871335 18871384 -84623590 - B2_Mm1t SINE B2 -7 186 138 5 728 683 100 10 0 chr15 18871383 18871483 -84623491 + B2_Mm1t SINE B2 6 106 -87 5 728 303 303 121 27 chr15 18872683 18872832 -84622142 + RSINE1 SINE B4 3 165 0 5 728 267 177 0 0 chr15 18872832 18872894 -84622080 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 728 206 0 0 65 chr15 18872897 18872928 -84622046 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 5 729 184 400 26 0 chr15 18874775 18874890 -84620084 - L2 LINE L2 -571 2848 2731 5 729 259 344 11 0 chr15 18875839 18875929 -84619045 - MTD LTR MaLR -17 362 272 5 729 340 304 77 47 chr15 18875945 18876242 -84618732 - RLTR15 LTR ERVK -3 356 51 5 729 1226 220 52 30 chr15 18876319 18876624 -84618350 - MTD LTR MaLR -103 316 5 5 729 834 334 59 43 chr15 18876709 18877388 -84617586 - Lx8 LINE L1 -2 7471 6760 5 729 1464 263 22 35 chr15 18877496 18877901 -84617073 - MTD LTR MaLR 0 419 20 5 729 882 319 37 60 chr15 18877938 18878421 -84616553 - Lx8 LINE L1 -848 6625 6154 5 729 30 83 0 0 chr15 18878429 18878501 -84616473 + AT_rich Low_complexity Low_complexity 1 72 0 5 729 2904 67 8 0 chr15 18878514 18878889 -84616085 - L1_Mus1 LINE L1 0 6567 6190 5 729 21 36 0 0 chr15 18879062 18879090 -84615884 + AT_rich Low_complexity Low_complexity 1 28 0 5 729 240 86 0 0 chr15 18879587 18879622 -84615352 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 729 38 18 0 18 chr15 18879981 18880008 -84614966 + AT_rich Low_complexity Low_complexity 1 27 0 5 729 1093 90 0 0 chr15 18880008 18880153 -84614821 - B1_Mm SINE Alu -1 146 2 5 729 38 18 0 18 chr15 18880153 18880181 -84614793 + AT_rich Low_complexity Low_complexity 1 28 0 5 729 4410 92 32 3 chr15 18880235 18880864 -84614110 - L1_Mus4 LINE L1 -3 6633 5987 5 729 2227 84 10 0 chr15 18880864 18881162 -84613812 + L1_Mus4 LINE L1 5648 5948 -688 5 729 683 314 118 35 chr15 18881877 18882217 -84612757 - MTD LTR MaLR -50 371 4 5 729 214 183 16 32 chr15 18882518 18882580 -84612394 + T-rich Low_complexity Low_complexity 1 61 0 5 729 21 36 0 0 chr15 18883267 18883295 -84611679 + AT_rich Low_complexity Low_complexity 1 28 0 5 729 201 290 0 0 chr15 18883385 18883447 -84611527 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 729 226 281 70 8 chr15 18883448 18883577 -84611397 - RMER17A2 LTR ERVK -520 386 250 5 729 296 358 8 16 chr15 18883934 18884059 -84610915 + MLT1A0 LTR MaLR 1 124 -241 5 729 1148 98 26 0 chr15 18884160 18884353 -84610621 + L1_Mus3 LINE L1 6440 6637 -1 5 729 219 88 0 0 chr15 18884419 18884453 -84610521 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 729 375 105 0 0 chr15 18884453 18884510 -84610464 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 729 820 372 122 49 chr15 18884514 18885731 -84609243 + MTE-int LTR MaLR 144 1448 -132 5 729 601 291 68 23 chr15 18885935 18886254 -84608720 - ORR1D2 LTR MaLR 0 359 21 5 729 732 23 0 0 chr15 18886953 18887039 -84607935 + (TTTCC)n Simple_repeat Simple_repeat 3 88 0 5 729 231 61 0 0 chr15 18887048 18887081 -84607893 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 729 1833 149 19 31 chr15 18887125 18887450 -84607524 + Lx2B LINE L1 6680 7000 0 5 729 31 58 0 0 chr15 18887596 18887648 -84607326 + AT_rich Low_complexity Low_complexity 1 52 0 5 729 2537 292 79 33 chr15 18890064 18891166 -84603808 - Lx8 LINE L1 -184 7289 6137 5 729 7161 97 11 3 chr15 18891184 18892230 -84602744 - Lx3_Mus LINE L1 0 7009 5955 5 729 901 72 14 35 chr15 18892230 18892329 -84602645 + Lx3_Mus LINE L1 5808 5908 -1101 5 729 200 59 0 29 chr15 18892329 18892364 -84602610 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 5 729 901 72 14 35 chr15 18892364 18892409 -84602565 + Lx3_Mus LINE L1 5909 5949 -1060 5 729 27 0 0 0 chr15 18895033 18895060 -84599914 + AT_rich Low_complexity Low_complexity 1 27 0 5 729 677 93 0 9 chr15 18896321 18896429 -84598545 + (TA)n Simple_repeat Simple_repeat 1 107 0 5 729 21 0 0 0 chr15 18896989 18897010 -84597964 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 207 231 15 15 chr15 18897989 18898055 -84596919 + (TATG)n Simple_repeat Simple_repeat 3 68 0 5 729 904 242 14 5 chr15 18898344 18898552 -84596422 + B3 SINE B2 2 211 -5 5 729 391 263 7 15 chr15 18899346 18899481 -84595493 - Lx6 LINE L1 -8 7452 7319 5 729 230 305 75 22 chr15 18899761 18899895 -84595079 + MIR SINE MIR 71 211 -51 5 729 408 248 33 8 chr15 18900598 18900720 -84594254 - Lx6 LINE L1 -11 7449 7325 5 729 23 54 0 0 chr15 18902930 18902967 -84592007 + AT_rich Low_complexity Low_complexity 1 37 0 5 729 28 29 0 0 chr15 18903046 18903081 -84591893 + AT_rich Low_complexity Low_complexity 1 35 0 5 729 213 194 0 0 chr15 18903230 18903266 -84591708 + B3A SINE B2 4 39 -159 5 729 1074 82 0 20 chr15 18903267 18903417 -84591557 + B1_Mus2 SINE Alu 1 147 0 5 729 207 105 26 0 chr15 18903420 18903458 -84591516 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 729 24 32 0 0 chr15 18903552 18903583 -84591391 + AT_rich Low_complexity Low_complexity 1 31 0 5 729 302 151 38 0 chr15 18907104 18907157 -84587817 - HAL1-3A_ME LINE L1 -829 2029 1975 5 729 195 292 0 0 chr15 18907163 18907252 -84587722 + (TG)n Simple_repeat Simple_repeat 2 90 0 5 729 567 262 88 27 chr15 18908233 18908367 -84586607 - Lx9 LINE L1 -8 7636 7503 5 729 207 0 0 0 chr15 18908367 18908390 -84586584 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 729 567 262 88 27 chr15 18908390 18908584 -84586390 - Lx9 LINE L1 -142 7502 7288 5 729 291 203 0 0 chr15 18910509 18910573 -84584401 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 5 729 22 35 0 0 chr15 18910691 18910720 -84584254 + AT_rich Low_complexity Low_complexity 1 29 0 6 729 376 173 59 89 chr15 18910752 18910900 -84584074 + ORR1C2 LTR MaLR 93 234 -144 6 729 465 184 0 0 chr15 18910900 18911014 -84583960 + CT-rich Low_complexity Low_complexity 2 115 0 6 729 333 287 31 31 chr15 18911503 18911600 -84583374 - B1F SINE Alu -23 97 1 6 729 2102 61 0 0 chr15 18911941 18912203 -84582771 + L1Md_A LINE L1 5923 6184 -398 6 729 2130 31 4 0 chr15 18912205 18912460 -84582514 + L1Md_A LINE L1 6327 6582 0 6 729 1785 162 16 9 chr15 18912530 18912882 -84582092 - Lx6 LINE L1 -1670 5790 5432 6 729 3064 220 25 54 chr15 18912885 18913610 -84581364 + Lx5 LINE L1 6343 7046 -4 6 729 252 273 0 0 chr15 18914661 18914738 -84580236 + (TA)n Simple_repeat Simple_repeat 2 78 0 6 729 28 0 0 0 chr15 18916318 18916346 -84578628 + AT_rich Low_complexity Low_complexity 1 28 0 6 729 6125 53 0 4 chr15 18918165 18918938 -84576036 + L1Md_F2 LINE L1 5813 6582 0 6 729 258 323 46 8 chr15 18919522 18919653 -84575321 + MER2 DNA MER2_type 167 302 -43 6 729 435 366 6 0 chr15 18919918 18920079 -84574895 + RSINE1 SINE B4 4 165 0 6 729 465 151 0 0 chr15 18920079 18920165 -84574809 + (CA)n Simple_repeat Simple_repeat 1 86 0 6 729 21 0 0 0 chr15 18920165 18920186 -84574788 + AT_rich Low_complexity Low_complexity 1 21 0 6 729 1046 23 0 0 chr15 18920772 18920902 -84574072 - B1_Mm SINE Alu 0 147 18 6 729 207 0 0 0 chr15 18922104 18922127 -84572847 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 6 729 313 301 79 62 chr15 18922167 18922791 -84572183 - L1M2 LINE L1 -4023 2826 2168 6 729 240 35 0 0 chr15 18922791 18922820 -84572154 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 729 291 305 104 49 chr15 18922820 18923035 -84571939 - L1M2 LINE L1 -4682 2167 1942 6 729 246 224 31 62 chr15 18925256 18925418 -84569556 + (TATAA)n Simple_repeat Simple_repeat 2 158 0 6 729 612 27 0 0 chr15 18926214 18926288 -84568686 + (TTTTG)n Simple_repeat Simple_repeat 2 75 0 6 729 900 128 0 0 chr15 18926289 18926422 -84568552 - B1_Mus1 SINE Alu -14 134 2 6 729 181 302 109 82 chr15 18926685 18926869 -84568105 - MIRc SINE MIR -73 195 7 6 729 577 288 113 22 chr15 18927505 18927949 -84567025 - L1MA6 LINE L1 -107 6193 5710 6 729 515 333 12 36 chr15 18928198 18928366 -84566608 + RSINE1 SINE B4 2 165 0 6 729 1233 67 0 22 chr15 18928645 18928678 -84566296 + (TCC)n Simple_repeat Simple_repeat 1 33 0 6 729 1218 73 0 16 chr15 18928678 18928860 -84566114 + (TTC)n Simple_repeat Simple_repeat 1 179 0 6 729 1233 67 0 22 chr15 18928860 18928902 -84566072 + (TCC)n Simple_repeat Simple_repeat 1 42 0 6 729 1289 73 6 0 chr15 18928902 18929080 -84565894 + (TTC)n Simple_repeat Simple_repeat 1 179 0 6 729 1233 67 0 22 chr15 18929080 18929187 -84565787 + (TCC)n Simple_repeat Simple_repeat 1 105 0 6 729 304 121 61 0 chr15 18929188 18929254 -84565720 + CT-rich Low_complexity Low_complexity 4 73 0 6 729 27 0 0 0 chr15 18929973 18930000 -84564974 + AT_rich Low_complexity Low_complexity 1 27 0 6 729 328 364 16 0 chr15 18931820 18931949 -84563025 + ID_B1 SINE B4 94 224 0 6 729 1643 139 59 134 chr15 18932844 18933046 -84561928 - ORR1A1 LTR MaLR 0 346 161 6 729 3370 39 7 25 chr15 18933046 18933491 -84561483 + L1Md_F3 LINE L1 6148 6584 0 6 729 1643 139 59 134 chr15 18933491 18933662 -84561312 - ORR1A1 LTR MaLR -186 160 1 6 729 9571 73 1 1 chr15 18934980 18936947 -84558027 - L1Md_F2 LINE L1 0 6582 4616 6 729 230 163 61 0 chr15 18937190 18937239 -84557735 - Lx9 LINE L1 -179 7465 7414 6 729 33 0 0 0 chr15 18937584 18937617 -84557357 + AT_rich Low_complexity Low_complexity 1 33 0 6 729 1174 49 0 7 chr15 18939075 18939220 -84555754 + B1_Mus2 SINE Alu 2 145 -2 6 729 438 28 56 0 chr15 18939220 18939291 -84555683 + (CAAAA)n Simple_repeat Simple_repeat 1 75 0 6 729 283 207 20 112 chr15 18940317 18940415 -84554559 + PB1D10 SINE Alu 21 109 -8 6 729 751 273 59 101 chr15 18941157 18941613 -84553361 + Lx7 LINE L1 7253 7689 -7 6 729 37 23 0 0 chr15 18943931 18943975 -84550999 + AT_rich Low_complexity Low_complexity 1 44 0 6 729 267 93 0 0 chr15 18946275 18946318 -84548656 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 729 225 250 257 10 chr15 18948931 18949032 -84545942 + ID_B1 SINE B4 99 224 0 6 729 308 312 0 0 chr15 18949056 18949136 -84545838 + ID4_ SINE ID 3 82 -1 6 729 1324 29 21 25 chr15 18949909 18950191 -84544783 + (TCTA)n Simple_repeat Simple_repeat 1 280 0 6 729 419 194 0 0 chr15 18950252 18950324 -84544650 + tRNA-Trp-TGG tRNA tRNA 1 72 -3 6 729 297 100 0 0 chr15 18950334 18950384 -84544590 + (T)n Simple_repeat Simple_repeat 1 50 0 6 729 1110 84 0 0 chr15 18950386 18950529 -84544445 + B1_Mus2 SINE Alu 5 147 0 6 729 23 0 0 0 chr15 18950883 18950906 -84544068 + AT_rich Low_complexity Low_complexity 1 23 0 6 729 22 0 0 0 chr15 18951753 18951775 -84543199 + AT_rich Low_complexity Low_complexity 1 22 0 6 729 267 114 0 0 chr15 18952099 18952143 -84542831 + (TGG)n Simple_repeat Simple_repeat 3 46 0 6 729 264 344 75 11 chr15 18952160 18952348 -84542626 - MIR SINE MIR -11 251 52 6 729 227 269 116 75 chr15 18952578 18952819 -84542155 + YREP_Mm Unknown Unknown 44 294 -1518 6 729 1072 58 7 0 chr15 18952695 18952833 -84542141 - B1_Mm SINE Alu 0 147 9 6 729 360 0 0 0 chr15 18952849 18952889 -84542085 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 6 729 1097 96 0 25 chr15 18952889 18953050 -84541924 - B2_Mm2 SINE B2 -37 158 2 6 729 201 197 0 0 chr15 18953945 18954016 -84540958 + (TCTG)n Simple_repeat Simple_repeat 4 74 0 6 729 966 234 15 42 chr15 18954537 18954796 -84540178 + RMER1C Other Other 964 1215 -127 6 729 3779 120 14 11 chr15 18954846 18955417 -84539557 - Lx3_Mus LINE L1 -44 6965 6393 6 729 502 184 8 81 chr15 18955415 18955539 -84539435 + RMER1C Other Other 1217 1331 -11 6 729 242 265 0 0 chr15 18956712 18956761 -84538213 + MTC LTR MaLR 179 227 -194 6 729 373 335 67 34 chr15 18956765 18957003 -84537971 + MLT2B1 LTR ERVL 9 254 -266 6 729 269 293 53 82 chr15 18957067 18957238 -84537736 + MLT2B1 LTR ERVL 390 555 0 6 729 245 306 22 101 chr15 18957661 18957799 -84537175 + MTD-int LTR MaLR 1132 1258 0 6 729 1070 255 90 71 chr15 18957799 18958166 -84536808 + MTD LTR MaLR 1 374 -45 6 729 351 294 257 20 chr15 18958381 18958672 -84536302 - Lx8 LINE L1 -208 7265 6906 6 729 1935 265 67 2 chr15 18958682 18959162 -84535812 - Lx5 LINE L1 -1 7049 6539 6 729 1231 328 123 8 chr15 18959165 18959907 -84535067 - Lx8 LINE L1 -562 6911 6085 6 729 1249 116 16 0 chr15 18959919 18960108 -84534866 - B2_Mm2 SINE B2 -3 192 1 6 729 327 339 89 5 chr15 18960350 18960540 -84534434 - L1M5 LINE L1 -2103 4043 3838 6 729 556 198 188 102 chr15 18960553 18960750 -84534224 + B3 SINE B2 3 216 0 6 729 203 61 30 0 chr15 18960865 18960898 -84534076 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 729 903 95 6 124 chr15 18960899 18961068 -84533906 - B1_Mur4 SINE Alu -1 149 1 6 729 22 35 0 0 chr15 18961130 18961159 -84533815 + AT_rich Low_complexity Low_complexity 1 29 0 6 729 984 166 0 52 chr15 18961213 18961404 -84533570 + Lx3B LINE L1 6757 6937 -36 6 729 297 0 0 0 chr15 18961464 18961497 -84533477 + (CAT)n Simple_repeat Simple_repeat 1 33 0 6 729 23 0 0 0 chr15 18961976 18961999 -84532975 + AT_rich Low_complexity Low_complexity 1 23 0 6 729 37 39 0 0 chr15 18962046 18962097 -84532877 + AT_rich Low_complexity Low_complexity 1 51 0 6 729 245 281 16 0 chr15 18962638 18962702 -84532272 - PB1D10 SINE Alu -1 116 52 6 729 253 268 3 14 chr15 18963584 18963665 -84531309 + L1MC1 LINE L1 5528 5611 -722 6 729 365 258 39 28 chr15 18963760 18963942 -84531032 + L1MC1 LINE L1 5761 5949 -230 6 729 1889 211 10 22 chr15 18964271 18964683 -84530291 + MTB_Mm LTR MaLR 1 407 0 6 729 5868 95 66 10 chr15 18964683 18965598 -84529376 + Lx3_Mus LINE L1 6038 7003 -6 6 729 2687 72 3 14 chr15 18966342 18966708 -84528266 - L1Md_F2 LINE L1 -2 6580 6219 6 729 28 48 0 0 chr15 18967429 18967471 -84527503 + AT_rich Low_complexity Low_complexity 1 42 0 6 729 362 322 17 0 chr15 18967720 18967835 -84527139 - B3A SINE B2 -81 117 1 6 729 1702 49 9 9 chr15 18968030 18968258 -84526716 - L1Md_F3 LINE L1 -1 6583 6356 6 729 6294 29 9 0 chr15 18968269 18969374 -84525600 + L1Md_F3 LINE L1 5243 6363 -219 6 729 190 362 12 0 chr15 18969982 18970062 -84524912 + MIRb SINE MIR 180 260 -8 6 729 2054 99 54 3 chr15 18970194 18970508 -84524466 - L1_Mus4 LINE L1 -233 6403 6074 6 729 838 322 86 20 chr15 18970518 18970914 -84524060 - Lx8 LINE L1 -127 7346 6925 6 729 2029 186 198 39 chr15 18971336 18971841 -84523133 - RMER4B LTR ERVK 0 585 1 6 729 28 48 0 0 chr15 18972047 18972089 -84522885 + AT_rich Low_complexity Low_complexity 1 42 0 6 729 23 33 0 0 chr15 18973532 18973562 -84521412 + AT_rich Low_complexity Low_complexity 1 30 0 6 729 2041 183 116 115 chr15 18974875 18975562 -84519412 - RMER6C LTR ERVK -2 688 1 6 729 276 30 0 0 chr15 18975635 18975668 -84519306 + (T)n Simple_repeat Simple_repeat 1 33 0 6 729 251 214 18 18 chr15 18975668 18975725 -84519249 - MTC LTR MaLR -169 252 196 6 729 1685 51 0 5 chr15 18975725 18975975 -84518999 - L1Md_T LINE L1 0 6582 6368 6 729 548 246 75 40 chr15 18976571 18976770 -84518204 - RLTR45 LTR ERVK -12 470 265 6 729 2190 114 15 6 chr15 18978914 18979248 -84515726 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 729 23964 43 32 17 chr15 18979248 18982273 -84512701 + IAPEz-int LTR ERVK 8 3076 -3405 6 729 6532 57 12 18 chr15 18982259 18983114 -84511860 + IAPEz-int LTR ERVK 5630 6479 -2 6 729 2190 114 15 6 chr15 18983116 18983450 -84511524 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 729 262 367 59 13 chr15 18983477 18983629 -84511345 + LTR40b LTR ERVL 255 413 -49 6 729 257 312 10 68 chr15 18983801 18983916 -84511058 - PB1D10 SINE Alu -35 114 9 6 729 1221 106 42 6 chr15 18984439 18984660 -84510314 + L1_Mus3 LINE L1 6173 6387 -251 6 729 3330 121 2 0 chr15 18984661 18985148 -84509826 - L1_Mus3 LINE L1 -175 5708 5221 6 729 4660 102 24 20 chr15 18985145 18985999 -84508975 + L1_Mus3 LINE L1 5708 6632 -6 6 729 27 0 0 0 chr15 18986263 18986290 -84508684 + AT_rich Low_complexity Low_complexity 1 27 0 6 729 281 286 48 0 chr15 18986379 18986463 -84508511 + 4.5SRNA scRNA scRNA 4 91 -3 7 729 228 67 0 0 chr15 18986463 18986493 -84508481 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 7 729 35 0 0 0 chr15 18986595 18986630 -84508344 + AT_rich Low_complexity Low_complexity 1 35 0 7 729 198 128 0 0 chr15 18986743 18986782 -84508192 + (T)n Simple_repeat Simple_repeat 1 39 0 7 729 4329 16 2 12 chr15 18987079 18987577 -84507397 + MT2_Mm LTR ERVL 1 493 0 7 729 47333 15 6 0 chr15 18987577 18992903 -84502071 + MERVL-int LTR ERVL 1 5360 -125 7 729 375 179 46 35 chr15 18992903 18992990 -84501984 + ORR1A3-int LTR MaLR 553 640 -1323 7 729 314 0 0 0 chr15 18992990 18993028 -84501946 + MERVL-int LTR ERVL 5448 5485 0 7 729 4329 16 2 12 chr15 18993028 18993526 -84501448 + MT2_Mm LTR ERVL 1 493 0 7 729 25 31 0 0 chr15 18994399 18994431 -84500543 + AT_rich Low_complexity Low_complexity 1 32 0 7 729 28 0 0 0 chr15 18994659 18994687 -84500287 + AT_rich Low_complexity Low_complexity 1 28 0 7 729 594 245 30 24 chr15 18994714 18994804 -84500170 - RLTR20A2 LTR ERVK 0 578 492 7 729 360 0 0 0 chr15 18994804 18994844 -84500130 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 729 594 245 30 24 chr15 18994844 18994920 -84500054 - RLTR20A2 LTR ERVK -87 491 412 7 729 402 231 22 11 chr15 18994900 18994992 -84499982 - RLTR20A2 LTR ERVK -285 283 191 7 729 463 282 11 71 chr15 18995151 18995334 -84499640 - Lx5 LINE L1 0 7050 6879 7 729 186 71 0 0 chr15 18995738 18995766 -84499208 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 7 729 1339 311 3 11 chr15 18996325 18996702 -84498272 + Lx6 LINE L1 7085 7458 -2 7 729 31 68 0 0 chr15 18996834 18996893 -84498081 + AT_rich Low_complexity Low_complexity 1 59 0 7 729 407 309 124 6 chr15 18996948 18997117 -84497857 - B3 SINE B2 -1 215 27 7 729 3695 64 20 2 chr15 18997489 18997976 -84496998 - LTRIS2 LTR ERV1 0 564 69 7 729 389 340 0 81 chr15 18998387 18998560 -84496414 - MER67D LTR ERV1 -243 271 113 7 729 38 0 0 0 chr15 19000422 19000460 -84494514 + AT_rich Low_complexity Low_complexity 1 38 0 1 729 908 182 18 0 chr15 19001020 19001185 -84493789 - Lx9 LINE L1 -946 6698 6531 2 729 338 252 35 18 chr15 19001235 19001348 -84493626 - Lx9 LINE L1 -1241 6403 6289 2 729 514 294 368 16 chr15 19001441 19001764 -84493210 - Lx9 LINE L1 -1613 6031 5595 2 729 238 254 15 15 chr15 19001827 19001895 -84493079 + RLTR12B LTR ERVK 41 108 -420 3 729 300 242 81 59 chr15 19001935 19002071 -84492903 + RLTR12B LTR ERVK 383 521 -7 3 729 3102 124 87 4 chr15 19003040 19003559 -84491415 - Lx2A1 LINE L1 -97 5786 5225 4 729 7004 143 36 4 chr15 19003562 19004724 -84490250 + Lx2A1 LINE L1 5796 6994 -14 4 729 323 44 22 0 chr15 19004724 19004769 -84490205 + (TAAAA)n Simple_repeat Simple_repeat 4 49 0 5 729 2602 134 33 9 chr15 19004980 19005403 -84489571 - RLTR10C LTR ERVK -3 433 1 6 730 376 183 64 40 chr15 19005631 19005756 -84489218 - RCHARR1 DNA MER1_type -102 872 745 7 730 477 245 172 39 chr15 19005767 19005971 -84489003 - Lx8 LINE L1 -2 7471 7241 8 730 2982 270 61 25 chr15 19006282 19007365 -84487609 + MYSERV6-int LTR ERVK 329 1450 -7509 9 730 423 262 10 0 chr15 19007532 19007635 -84487339 - Lx3C LINE L1 -951 6025 5922 1 730 2742 179 0 6 chr15 19007632 19008132 -84486842 + Lx3C LINE L1 6014 6510 -466 1 730 3258 259 48 42 chr15 19008139 19009225 -84485749 + MYSERV6-int LTR ERVK 1744 2835 -6124 9 730 1155 143 0 33 chr15 19009261 19009471 -84485503 + MYSERV6-int LTR ERVK 8163 8365 -594 9 730 310 250 0 11 chr15 19009472 19009565 -84485409 + HAL1-2a_MD LINE L1 2353 2444 -580 1 730 382 274 10 0 chr15 19009577 19009679 -84485295 + MYSERV6-int LTR ERVK 8424 8526 -433 9 730 2089 244 14 19 chr15 19009683 19010197 -84484777 + MYSERV-int LTR ERVK 6014 6524 -26 1 730 402 276 151 68 chr15 19010219 19010508 -84484466 + RLTR12B LTR ERVK 1 307 -220 1 730 4620 133 17 52 chr15 19010513 19010666 -84484308 - RLTR13D1 LTR ERVK 0 806 662 1 730 252 0 0 0 chr15 19010666 19010694 -84484280 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 730 4620 133 17 52 chr15 19010694 19011373 -84483601 - RLTR13D1 LTR ERVK -145 661 4 1 730 688 320 13 26 chr15 19011588 19011896 -84483078 - L1_Rod LINE L1 -257 5590 5287 1 730 1921 165 58 29 chr15 19012427 19012807 -84482167 - ORR1B1 LTR MaLR -3 391 1 1 730 503 69 14 0 chr15 19013209 19013281 -84481693 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 1 730 4044 118 13 25 chr15 19013284 19013917 -84481057 - Lx3A LINE L1 -18 6963 6339 1 730 690 82 0 0 chr15 19014109 19014207 -84480767 + (TTTC)n Simple_repeat Simple_repeat 4 101 0 1 730 833 262 64 91 chr15 19014207 19014513 -84480461 - Lx7 LINE L1 -49 7647 7345 2 730 710 0 0 23 chr15 19014513 19014600 -84480374 + (GAGAA)n Simple_repeat Simple_repeat 5 89 0 2 730 833 262 64 91 chr15 19014600 19014733 -84480241 - Lx7 LINE L1 -352 7344 7220 2 730 186 106 64 0 chr15 19014805 19014852 -84480122 + T-rich Low_complexity Low_complexity 2 51 0 2 730 1491 249 43 27 chr15 19014994 19015477 -84479497 - L1_Rod LINE L1 -3363 2484 1994 2 730 222 118 0 0 chr15 19015508 19015542 -84479432 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 730 181 91 22 43 chr15 19015615 19015661 -84479313 + (TTATA)n Simple_repeat Simple_repeat 5 49 0 2 730 449 204 21 7 chr15 19015686 19015829 -84479145 + (TA)n Simple_repeat Simple_repeat 2 146 0 2 730 676 228 75 68 chr15 19015829 19016272 -84478702 - L1_Rod LINE L1 -3918 1929 1484 2 730 253 271 11 23 chr15 19016909 19016996 -84477978 + CT-rich Low_complexity Low_complexity 2 87 0 2 730 534 276 0 89 chr15 19018132 19018367 -84476607 + L1_Mur3 LINE L1 4973 5186 -694 2 730 3941 84 30 11 chr15 19018373 19018940 -84476034 - Lx3_Mus LINE L1 -1 7008 6431 2 730 536 278 7 20 chr15 19018940 19019079 -84475895 + Lx8 LINE L1 6379 6515 -958 3 730 930 310 133 28 chr15 19019094 19019655 -84475319 + Lx8 LINE L1 6617 7236 -237 3 730 530 342 42 60 chr15 19019699 19020147 -84474827 + L1M2 LINE L1 4903 5342 -801 3 730 295 250 48 0 chr15 19020161 19020245 -84474729 + L1_Rod LINE L1 5323 5410 -437 3 730 239 286 134 16 chr15 19020942 19021138 -84473836 + RMER20B LTR ERVK 126 329 -298 3 730 247 308 93 47 chr15 19021182 19021332 -84473642 + RMER20B LTR ERVK 460 616 -11 3 730 364 255 87 27 chr15 19021367 19021516 -84473458 + L1_Mur3 LINE L1 978 1135 -6593 3 730 951 258 5 97 chr15 19021664 19022107 -84472867 + L1_Mur3 LINE L1 1203 1604 -4276 3 730 207 0 0 0 chr15 19022110 19022133 -84472841 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 3 730 305 293 89 51 chr15 19022156 19022472 -84472502 + L1M2 LINE L1 3072 3399 -2744 3 730 261 247 58 8 chr15 19022514 19022623 -84472351 + L1M2 LINE L1 5484 5627 -676 3 730 727 230 11 17 chr15 19024527 19024704 -84470270 + B2_Mm2 SINE B2 1 176 -19 3 730 32688 84 2 5 chr15 19025367 19030799 -84464175 + L1Md_F2 LINE L1 212 5585 -298 3 730 7917 52 1 8 chr15 19030800 19031803 -84463171 + L1Md_F2 LINE L1 5587 6582 0 3 730 2217 220 50 22 chr15 19032619 19033116 -84461858 + Lx5 LINE L1 6537 7047 -3 3 730 273 247 13 0 chr15 19035644 19035721 -84459253 + (TA)n Simple_repeat Simple_repeat 1 78 0 4 730 728 288 55 55 chr15 19035778 19036090 -84458884 - RMER5 LTR ERV1 -222 312 1 4 730 757 168 50 25 chr15 19036197 19036356 -84458618 + URR1A DNA MER1_type 64 226 0 4 730 228 344 91 30 chr15 19036622 19036754 -84458220 - MLT-int LTR MaLR -902 833 694 4 730 186 308 72 36 chr15 19036929 19037040 -84457934 - L3 LINE CR1 -2182 2307 2193 4 730 21 36 0 0 chr15 19037820 19037848 -84457126 + AT_rich Low_complexity Low_complexity 1 28 0 4 730 462 79 0 0 chr15 19040049 19040112 -84454862 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 4 730 1106 40 59 0 chr15 19040137 19040289 -84454685 + L1Md_F3 LINE L1 6409 6569 -15 4 730 407 319 68 27 chr15 19040598 19040891 -84454083 + MLT1-int LTR MaLR 245 549 -822 4 730 22 0 0 0 chr15 19042311 19042333 -84452641 + AT_rich Low_complexity Low_complexity 1 22 0 4 730 707 83 9 0 chr15 19042720 19042828 -84452146 + (CTAAA)n Simple_repeat Simple_repeat 3 111 0 5 730 24 53 0 0 chr15 19043663 19043701 -84451273 + AT_rich Low_complexity Low_complexity 1 38 0 5 730 198 0 0 0 chr15 19046125 19046147 -84448827 + (TAA)n Simple_repeat Simple_repeat 2 23 0 5 730 685 257 86 0 chr15 19046349 19046524 -84448450 + B3 SINE B2 16 205 -11 5 730 207 0 0 0 chr15 19047885 19047908 -84447066 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 730 677 282 39 100 chr15 19047961 19048657 -84446317 - Lx6 LINE L1 -56 7404 6277 5 730 435 395 65 53 chr15 19048912 19049268 -84445706 + LTR16E1 LTR ERVL 68 427 -111 5 730 350 308 75 8 chr15 19049414 19049548 -84445426 + B4 SINE B4 2 144 -148 5 730 270 269 24 24 chr15 19049694 19049845 -84445129 + L1_Rod LINE L1 2481 2608 -3269 5 730 1233 196 111 18 chr15 19049846 19050031 -84444943 + Lx9 LINE L1 7282 7468 -176 5 730 240 122 0 0 chr15 19050031 19050072 -84444902 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 730 1233 196 111 18 chr15 19050072 19050218 -84444756 + Lx9 LINE L1 7469 7644 0 5 730 246 309 61 49 chr15 19050223 19050468 -84444506 + L1_Rod LINE L1 3353 3600 -2543 6 730 1890 185 66 48 chr15 19050763 19051201 -84443773 - RLTR41 LTR ERV1 0 446 1 6 730 2030 244 87 45 chr15 19051206 19052013 -84442961 - RMER1B Other Other -1 1065 31 6 730 12771 70 13 39 chr15 19052018 19052184 -84442790 - RLTR22_Mus LTR ERVK 0 1808 1664 6 730 3063 86 0 2 chr15 19052184 19052581 -84442393 + MTA_Mm LTR MaLR 1 396 0 6 730 12771 70 13 39 chr15 19052581 19052953 -84442021 - RLTR22_Mus LTR ERVK -145 1663 1311 6 730 294 29 0 0 chr15 19052953 19052988 -84441986 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 730 12771 70 13 39 chr15 19052988 19054304 -84440670 - RLTR22_Mus LTR ERVK -498 1310 1 6 730 301 292 164 71 chr15 19054304 19054607 -84440367 - RMER1A Other Other -575 455 1 6 730 1910 220 41 31 chr15 19054613 19055137 -84439837 - Lx5 LINE L1 -841 6209 5697 6 730 2336 196 38 56 chr15 19055778 19056504 -84438470 - RMER6C LTR ERVK -10 680 1 6 730 947 320 77 9 chr15 19056959 19057299 -84437675 - MTE2b LTR MaLR -4 375 13 7 730 978 315 55 29 chr15 19057299 19058107 -84436867 + L1_Rod LINE L1 5040 5826 -54 6 730 384 22 0 0 chr15 19058148 19058193 -84436781 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 730 264 324 43 11 chr15 19058919 19059103 -84435871 + L1MD3 LINE L1 7792 7981 -14 7 730 602 89 11 0 chr15 19059818 19059908 -84435066 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 7 730 27 0 0 0 chr15 19060137 19060164 -84434810 + AT_rich Low_complexity Low_complexity 1 27 0 7 730 33546 71 0 15 chr15 19060591 19065704 -84429270 + L1Md_T LINE L1 554 5586 -297 7 730 8026 54 0 0 chr15 19065704 19066700 -84428274 + L1Md_T LINE L1 5587 6582 0 7 730 7427 66 2 0 chr15 19066700 19067649 -84427325 + L1Md_F2 LINE L1 4636 5586 -297 7 730 7812 52 5 0 chr15 19067649 19068628 -84426346 + L1Md_F2 LINE L1 5587 6570 -12 7 730 765 74 25 0 chr15 19068908 19069030 -84425944 + (TA)n Simple_repeat Simple_repeat 2 126 0 7 730 479 246 25 8 chr15 19069450 19069569 -84425405 - B1_Mur4 SINE Alu -6 144 24 7 730 25 31 0 0 chr15 19071453 19071485 -84423489 + AT_rich Low_complexity Low_complexity 1 32 0 7 730 792 334 56 27 chr15 19071874 19072261 -84422713 + MLT-int LTR MaLR 1388 1734 -1 8 730 2841 87 0 13 chr15 19072865 19073262 -84421712 + L1Md_F2 LINE L1 6179 6570 -12 8 730 467 153 153 0 chr15 19073866 19073964 -84421010 - B1_Mus2 SINE Alu -1 146 34 8 730 1172 169 23 208 chr15 19074059 19074454 -84420520 - RLTR23 LTR ERV1 -2 428 107 8 730 342 0 0 0 chr15 19074466 19074504 -84420470 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 730 477 0 0 0 chr15 19074504 19074557 -84420417 + (GA)n Simple_repeat Simple_repeat 1 53 0 8 730 3183 237 74 28 chr15 19074560 19075371 -84419603 - Lx6 LINE L1 -348 7112 6265 8 730 933 97 0 0 chr15 19075644 19075778 -84419196 + (GAAA)n Simple_repeat Simple_repeat 3 136 0 8 730 16705 95 41 1 chr15 19075801 19078917 -84416057 - L1_Mus1 LINE L1 0 6567 3328 8 730 7962 53 2 7 chr15 19078917 19080152 -84414822 - L1Md_F3 LINE L1 -14 6570 5341 8 730 14964 101 6 24 chr15 19080147 19083120 -84411854 - L1_Mus1 LINE L1 -2549 3334 417 8 730 2029 298 81 47 chr15 19083288 19083502 -84411472 - Charlie1a DNA MER1_type -26 1429 1205 9 730 758 241 39 10 chr15 19083502 19083707 -84411267 + B3 SINE B2 2 212 -4 9 730 2029 298 81 47 chr15 19083707 19084671 -84410303 - Charlie1a DNA MER1_type -251 1204 210 9 730 2500 157 18 7 chr15 19084775 19085231 -84409743 + Lx2B LINE L1 6540 7000 0 9 730 209 233 0 85 chr15 19085245 19085285 -84409689 + A-rich Low_complexity Low_complexity 6 42 0 9 730 959 235 9 32 chr15 19085285 19085505 -84409469 + B3 SINE B2 2 216 0 9 730 1571 59 18 5 chr15 19085505 19085780 -84409194 + L1_Mus3 LINE L1 6406 6638 0 9 730 1777 164 11 57 chr15 19085822 19086172 -84408802 + RMER6A LTR ERVK 1 334 -422 9 730 25 0 0 0 chr15 19086409 19086434 -84408540 + AT_rich Low_complexity Low_complexity 1 25 0 9 730 738 260 33 29 chr15 19086763 19086973 -84408001 - B3 SINE B2 -5 211 1 9 730 312 119 0 0 chr15 19088118 19088177 -84406797 + (A)n Simple_repeat Simple_repeat 1 59 0 9 730 1309 129 28 0 chr15 19088438 19088655 -84406319 + Lx2 LINE L1 6767 6989 -8 1 730 1309 129 28 0 chr15 19089276 19089493 -84405481 + Lx2 LINE L1 6767 6989 -8 1 730 181 229 20 20 chr15 19090006 19090055 -84404919 + L3 LINE CR1 790 838 -3651 1 730 671 152 113 11 chr15 19090567 19090753 -84404221 - Lx9 LINE L1 0 7644 7440 1 730 239 324 84 49 chr15 19092438 19092581 -84402393 - RSINE1 SINE B4 -4 161 14 1 730 33 56 0 0 chr15 19092584 19092638 -84402336 + AT_rich Low_complexity Low_complexity 1 54 0 1 730 2721 69 5 5 chr15 19095077 19095455 -84399519 - L1Md_F2 LINE L1 -2 6580 6203 1 730 755 80 0 0 chr15 19095455 19095555 -84399419 + L1Md_F2 LINE L1 6003 6102 -480 1 730 708 215 112 25 chr15 19096325 19096521 -84398453 + Lx9 LINE L1 6980 7192 -452 1 730 644 268 62 35 chr15 19096529 19096788 -84398186 + Lx9 LINE L1 7360 7625 -19 1 730 21 0 0 0 chr15 19096999 19097020 -84397954 + AT_rich Low_complexity Low_complexity 1 21 0 1 730 230 352 43 30 chr15 19097586 19097750 -84397224 - L2b LINE L2 -185 3190 3025 1 730 1013 167 12 6 chr15 19098815 19098984 -84395990 + Lx LINE L1 6126 6295 -359 1 730 1425 139 0 0 chr15 19098984 19099207 -84395767 + Lx2 LINE L1 6775 6997 0 1 730 1072 58 0 42 chr15 19099216 19099359 -84395615 + B1_Mm SINE Alu 1 137 -10 1 730 216 0 0 0 chr15 19099359 19099383 -84395591 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 730 22 0 0 0 chr15 19099383 19099405 -84395569 + AT_rich Low_complexity Low_complexity 1 22 0 1 730 296 411 0 0 chr15 19100177 19100284 -84394690 + B4A SINE B4 2 108 -184 1 730 2338 81 23 0 chr15 19100286 19100595 -84394379 - L1_Mus3 LINE L1 -274 5609 5294 1 730 6776 96 26 1 chr15 19100588 19101573 -84393401 + L1_Mus3 LINE L1 5629 6638 0 1 730 526 337 34 11 chr15 19101585 19101762 -84393212 + B4A SINE B4 112 292 0 1 730 186 271 0 0 chr15 19101768 19101853 -84393121 + (CA)n Simple_repeat Simple_repeat 1 85 0 1 730 632 154 19 6 chr15 19101921 19102078 -84392896 + (CA)n Simple_repeat Simple_repeat 2 160 0 1 730 281 207 0 24 chr15 19102159 19102243 -84392731 + T-rich Low_complexity Low_complexity 6 87 0 1 730 1715 159 22 25 chr15 19102297 19102620 -84392354 - Lx3C LINE L1 -2 6974 6653 1 730 1838 204 52 10 chr15 19102621 19103008 -84391966 + Lx2B LINE L1 6597 6999 -1 1 730 209 33 33 0 chr15 19103631 19103661 -84391313 + (TAA)n Simple_repeat Simple_repeat 1 31 0 1 730 215 368 73 7 chr15 19104113 19104250 -84390724 - L2 LINE L2 -550 2869 2724 1 730 207 69 0 0 chr15 19104599 19104628 -84390346 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 1 730 694 264 22 0 chr15 19104659 19104837 -84390137 - Lx5 LINE L1 -9 7041 6860 1 730 559 120 6 8 chr15 19104928 19105024 -84389950 + Lx5 LINE L1 6439 6557 -501 1 730 979 191 26 112 chr15 19105035 19105351 -84389623 - RMER16 LTR ERVK -76 457 1 1 730 1104 214 15 0 chr15 19105351 19105557 -84389417 + Lx5 LINE L1 6512 6720 -330 1 730 1302 112 0 5 chr15 19105791 19105979 -84388995 - B2_Mm2 SINE B2 -8 187 1 1 730 413 338 129 4 chr15 19106203 19106435 -84388539 + L2 LINE L2 1989 2249 -1170 1 730 756 247 12 0 chr15 19106461 19106623 -84388351 + MTC LTR MaLR 2 165 -256 1 730 13828 69 8 1 chr15 19106623 19108477 -84386497 - L1_Mm LINE L1 -1455 4428 2561 1 730 2064 74 3 0 chr15 19108477 19108761 -84386213 + L1Md_F2 LINE L1 6298 6582 0 1 730 1410 202 8 0 chr15 19108765 19109023 -84385951 + MTC LTR MaLR 162 421 0 1 730 1094 110 69 0 chr15 19109216 19109389 -84385585 - B2_Mm2 SINE B2 -9 186 2 1 730 347 337 105 0 chr15 19109991 19110181 -84384793 + B3 SINE B2 1 210 -6 1 730 193 57 0 54 chr15 19110223 19110260 -84384714 + (CAAAA)n Simple_repeat Simple_repeat 4 38 0 1 730 315 275 62 91 chr15 19110407 19110559 -84384415 + Lx8 LINE L1 7193 7341 -132 1 730 182 62 31 0 chr15 19110559 19110591 -84384383 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 730 315 275 62 91 chr15 19110591 19110646 -84384328 + Lx8 LINE L1 7342 7394 -79 1 730 555 65 14 4 chr15 19112616 19112694 -84382280 - L1Md_F2 LINE L1 -375 6207 6130 1 730 194 0 39 0 chr15 19112695 19112721 -84382253 + (TAAAAA)n Simple_repeat Simple_repeat 2 28 0 1 730 296 257 29 0 chr15 19113125 19113195 -84381779 + ID4_ SINE ID 4 75 -8 1 730 557 203 49 128 chr15 19113289 19113492 -84381482 + B2_Mm2 SINE B2 1 187 -8 1 730 234 179 0 0 chr15 19116126 19116165 -84378809 + MamSINE1 SINE tRNA 38 76 -214 1 730 324 300 110 24 chr15 19116402 19116566 -84378408 - Lx9 LINE L1 -1109 6535 6358 1 730 997 309 9 29 chr15 19116688 19117004 -84377970 + Lx6 LINE L1 7117 7426 -34 1 730 213 39 0 0 chr15 19117004 19117030 -84377944 + (TAA)n Simple_repeat Simple_repeat 3 28 0 1 730 713 232 64 49 chr15 19117095 19117429 -84377545 - Lx9 LINE L1 -1617 6027 5658 1 730 868 322 116 64 chr15 19117531 19118215 -84376759 + Lx9 LINE L1 6742 7475 -169 1 730 363 96 0 0 chr15 19118215 19118267 -84376707 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 730 868 322 116 64 chr15 19118267 19118409 -84376565 + Lx9 LINE L1 7476 7611 -33 1 730 244 289 139 37 chr15 19118584 19118692 -84376282 - B4 SINE B4 -71 221 103 1 730 255 152 0 0 chr15 19120099 19120145 -84374829 + T-rich Low_complexity Low_complexity 1 46 0 1 730 1146 69 0 0 chr15 19120146 19120291 -84374683 - B1_Mus2 SINE Alu -1 146 2 1 730 272 364 73 44 chr15 19120480 19120753 -84374221 + MER90 LTR ERV1 176 456 -119 1 730 352 340 96 77 chr15 19120878 19121034 -84373940 + RSINE1 SINE B4 3 161 -4 1 730 2722 119 51 9 chr15 19122380 19122830 -84372144 + RLTR31B_Mm LTR ERVK 1 469 -88 1 730 486 49 0 0 chr15 19122848 19122909 -84372065 + (TC)n Simple_repeat Simple_repeat 2 62 0 1 730 231 61 0 0 chr15 19122909 19122941 -84372033 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 730 329 329 89 85 chr15 19123018 19123254 -84371720 - B4 SINE B4 -16 276 40 1 730 192 97 0 0 chr15 19123759 19123790 -84371184 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1 730 2516 78 6 0 chr15 19123916 19124248 -84370726 + L1_Mus1 LINE L1 6234 6567 0 1 730 21 36 0 0 chr15 19124334 19124362 -84370612 + AT_rich Low_complexity Low_complexity 1 28 0 1 730 3625 60 2 0 chr15 19124592 19125044 -84369930 + L1_Mus1 LINE L1 6113 6565 -2 1 730 2027 305 19 13 chr15 19125142 19125816 -84369158 - Lx8 LINE L1 -388 7085 6408 1 730 693 0 0 0 chr15 19125948 19126025 -84368949 + (GAA)n Simple_repeat Simple_repeat 2 78 0 1 730 1651 209 41 20 chr15 19126056 19126761 -84368213 + L1_Mur2 LINE L1 798 1509 -4368 1 730 1308 222 101 0 chr15 19126752 19127049 -84367925 - Lx4B LINE L1 -448 6610 6284 1 730 940 229 19 45 chr15 19127045 19127310 -84367664 + Lx4B LINE L1 5961 6218 -840 1 730 3108 49 0 0 chr15 19127853 19128321 -84366653 - L1Md_F2 LINE L1 -620 5962 5495 1 730 4637 61 24 10 chr15 19128322 19128948 -84366026 + L1Md_F2 LINE L1 5948 6582 0 1 730 246 252 16 31 chr15 19129054 19129181 -84365793 + A-rich Low_complexity Low_complexity 1 125 0 1 730 426 139 35 0 chr15 19129295 19129381 -84365593 - Lx3C LINE L1 -2 6974 6886 1 730 416 136 0 36 chr15 19130250 19130334 -84364640 + (TATATG)n Simple_repeat Simple_repeat 5 85 0 1 730 759 100 0 0 chr15 19130490 19130600 -84364374 + (CATATA)n Simple_repeat Simple_repeat 2 111 0 1 730 22 88 0 0 chr15 19132118 19132175 -84362799 + AT_rich Low_complexity Low_complexity 1 57 0 1 730 2205 193 131 34 chr15 19132415 19133042 -84361932 - RMER6C LTR ERVK -2 688 1 1 730 3683 246 37 20 chr15 19133139 19133987 -84360987 + Lx5 LINE L1 6031 6892 -158 1 730 1110 68 14 0 chr15 19134885 19135031 -84359943 + B1_Mus1 SINE Alu 1 148 0 1 730 2485 206 24 25 chr15 19135586 19136138 -84358836 + Lx4B LINE L1 6492 7042 -16 1 730 210 118 0 0 chr15 19136138 19136172 -84358802 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 1 91 986 345 7 7 chr15 19136252 19136532 -84358442 + B4A SINE B4 6 285 -7 1 731 231 214 58 35 chr15 19136763 19136850 -84358124 + L1M5 LINE L1 3899 3987 -2159 1 731 7216 31 25 0 chr15 19137720 19138588 -84356386 - L1Md_F2 LINE L1 0 6582 5693 1 731 222 118 0 0 chr15 19138724 19138758 -84356216 + (T)n Simple_repeat Simple_repeat 1 34 0 1 731 289 246 29 0 chr15 19139391 19139460 -84355514 + PB1D10 SINE Alu 17 87 -30 1 731 448 307 147 39 chr15 19140423 19140579 -84354395 + ID_B1 SINE B4 8 180 -44 1 731 15379 185 90 22 chr15 19140761 19144757 -84350217 - Lx5 LINE L1 -21 7029 2909 1 731 186 43 0 0 chr15 19144757 19144780 -84350194 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 731 15379 172 112 25 chr15 19144780 19145409 -84349565 - Lx5 LINE L1 -2969 2908 2052 1 731 306 0 0 0 chr15 19145409 19145443 -84349531 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 731 15379 172 112 25 chr15 19145443 19145655 -84349319 - Lx5 LINE L1 -3826 2051 1845 1 731 213 208 0 115 chr15 19145656 19145743 -84349231 + T-rich Low_complexity Low_complexity 1 77 0 1 731 2905 160 30 1 chr15 19147473 19148250 -84346724 - Lx5 LINE L1 -4050 1827 1031 1 731 10154 46 3 3 chr15 19148269 19150222 -84344752 - L1Md_F3 LINE L1 -14 6570 4616 1 731 1201 280 42 67 chr15 19150215 19150736 -84344238 - Lx5 LINE L1 -6029 1057 550 1 731 2773 81 10 7 chr15 19150766 19151176 -84343798 + BGLII LTR ERVK 11 421 0 1 731 417 20 0 0 chr15 19151314 19151364 -84343610 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 731 540 30 0 0 chr15 19151366 19151432 -84343542 + (TCTA)n Simple_repeat Simple_repeat 3 68 0 1 731 706 318 5 5 chr15 19151741 19151956 -84343018 + Lx8 LINE L1 6401 6615 -858 1 731 180 125 0 0 chr15 19152246 19152278 -84342696 + (TAAAAA)n Simple_repeat Simple_repeat 1 32 0 1 731 2330 234 53 13 chr15 19152512 19152694 -84342280 + RMER15 LTR ERVL 1 200 -375 1 731 234 0 0 0 chr15 19152694 19152720 -84342254 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 731 2330 234 53 13 chr15 19152720 19153087 -84341887 + RMER15 LTR ERVL 201 571 -4 1 731 185 0 40 0 chr15 19153285 19153310 -84341664 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1 731 243 0 0 0 chr15 19153712 19153739 -84341235 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 731 356 331 70 37 chr15 19153958 19154256 -84340718 + L1M4c LINE L1 1278 1585 -4799 1 731 2360 88 56 8 chr15 19156014 19156391 -84338583 - L1VL2 LINE L1 -633 2982 2588 1 731 1111 70 0 12 chr15 19156393 19156553 -84338421 + (TTTC)n Simple_repeat Simple_repeat 3 160 0 1 731 549 0 0 0 chr15 19156553 19156613 -84338361 + (TCCC)n Simple_repeat Simple_repeat 4 64 0 1 731 348 24 0 0 chr15 19156613 19156653 -84338321 + (TTTC)n Simple_repeat Simple_repeat 3 43 0 2 731 5917 115 22 19 chr15 19156653 19158481 -84336493 - L1VL2 LINE L1 -1659 1956 126 1 731 260 290 118 24 chr15 19158509 19158636 -84336338 + MLT1A1 LTR MaLR 268 406 -2 2 731 448 274 152 11 chr15 19158828 19159005 -84335969 + B3 SINE B2 4 205 -11 2 731 355 349 97 6 chr15 19159052 19159228 -84335746 - Tigger7 DNA MER2_type -3 2488 2297 2 731 3212 249 48 40 chr15 19159332 19159469 -84335505 - Lx7 LINE L1 -195 7501 7360 2 731 210 71 0 0 chr15 19159469 19159497 -84335477 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 731 3212 249 48 40 chr15 19159497 19160322 -84334652 - Lx7 LINE L1 -337 7359 6531 2 731 914 224 35 8 chr15 19160367 19160623 -84334351 - L1_Mur3 LINE L1 -2132 3748 3486 2 731 261 0 0 0 chr15 19160623 19160652 -84334322 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 2 731 1027 182 64 48 chr15 19160674 19160986 -84333988 - L1_Mur3 LINE L1 -2521 3359 3043 2 731 656 238 77 82 chr15 19160990 19161181 -84333793 - URR1B DNA MER1_type -5 220 28 2 731 1805 201 125 86 chr15 19161181 19161845 -84333129 + RMER6C LTR ERVK 1 690 0 2 731 656 238 77 82 chr15 19161845 19161873 -84333101 - URR1B DNA MER1_type -198 27 2 2 731 1206 200 98 49 chr15 19161874 19162242 -84332732 - L1_Mur3 LINE L1 -2830 3050 2665 2 731 976 122 0 12 chr15 19162242 19162408 -84332566 + (GGGGA)n Simple_repeat Simple_repeat 5 168 0 2 731 180 0 0 0 chr15 19162424 19162444 -84332530 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2 731 2900 227 46 14 chr15 19162474 19163129 -84331845 - L1_Mur3 LINE L1 -3763 2117 1429 2 731 198 0 0 0 chr15 19163129 19163151 -84331823 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 2 731 2900 241 94 37 chr15 19163151 19163927 -84331047 - L1_Mur3 LINE L1 -4452 1428 604 2 731 397 132 0 14 chr15 19163927 19163996 -84330978 + B1_Mus1 SINE Alu 1 68 -80 2 731 556 198 31 19 chr15 19163996 19164126 -84330848 + Lx9 LINE L1 7346 7478 -166 2 731 369 0 0 0 chr15 19164126 19164167 -84330807 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 731 556 198 31 19 chr15 19164167 19164196 -84330778 + Lx9 LINE L1 7479 7507 -137 2 731 1150 149 36 5 chr15 19164217 19164412 -84330562 - RMER6C LTR ERVK -489 201 1 2 731 366 248 129 3 chr15 19164412 19164641 -84330333 + L1_Rod LINE L1 1172 1428 -4419 2 731 381 364 37 29 chr15 19164849 19164985 -84329989 + RSINE1 SINE B4 12 148 -17 2 731 233 167 0 18 chr15 19164987 19165042 -84329932 + (TAAG)n Simple_repeat Simple_repeat 2 55 0 2 731 409 57 0 0 chr15 19165056 19165109 -84329865 - B1_Mus2 SINE Alu -29 118 66 2 731 790 260 36 0 chr15 19165112 19165335 -84329639 - Lx9 LINE L1 -453 7191 6961 2 731 479 392 12 4 chr15 19166013 19166259 -84328715 + Lx8 LINE L1 6952 7199 -274 2 731 3311 154 42 29 chr15 19166957 19167550 -84327424 - MT2B LTR ERVL 0 601 1 2 731 426 259 156 34 chr15 19168172 19168500 -84326474 + RLTR9A LTR ERVK 1 368 0 2 731 252 0 0 0 chr15 19168512 19168540 -84326434 + (T)n Simple_repeat Simple_repeat 1 28 0 2 731 1815 313 56 59 chr15 19171265 19171542 -84323432 + Lx7 LINE L1 6420 6684 -1012 2 731 1028 90 43 48 chr15 19171542 19171729 -84323245 - L1_Mus3 LINE L1 -1 6637 6452 2 731 1815 320 60 60 chr15 19171729 19172492 -84322482 + Lx7 LINE L1 6685 7471 -2 2 731 1605 153 88 157 chr15 19172611 19173045 -84321929 - RLTR9F LTR ERVK -11 404 1 2 731 412 111 27 14 chr15 19173046 19173119 -84321855 - ETnERV2-int LTR ERVK -2 7404 7331 2 731 14858 182 14 17 chr15 19173331 19176206 -84318768 - ETnERV2-int LTR ERVK -981 6425 2798 2 731 2555 250 24 29 chr15 19176239 19177120 -84317854 - ETnERV-int LTR ERVK -2371 943 3 2 731 1754 203 31 79 chr15 19177136 19177590 -84317384 - RLTR9B LTR ERVK -5 432 1 2 731 21 0 0 0 chr15 19177950 19177971 -84317003 + AT_rich Low_complexity Low_complexity 1 21 0 2 731 189 0 0 0 chr15 19178614 19178635 -84316339 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 731 1367 304 46 46 chr15 19178948 19179599 -84315375 - Lx9 LINE L1 -534 7110 6460 2 731 329 368 0 0 chr15 19180101 19180215 -84314759 - Lx8 LINE L1 -544 6929 6816 2 731 1290 255 57 23 chr15 19180216 19180601 -84314373 - MTD LTR MaLR -2 405 10 2 731 298 57 38 0 chr15 19180603 19180656 -84314318 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 2 731 556 325 102 22 chr15 19180656 19180980 -84313994 - Lx8 LINE L1 -643 6830 6481 2 731 1960 146 55 1 chr15 19180995 19181361 -84313613 - Lx2 LINE L1 -113 6884 6211 2 731 234 0 0 0 chr15 19183320 19183346 -84311628 + (CAAT)n Simple_repeat Simple_repeat 4 29 0 2 731 25 31 0 0 chr15 19183357 19183389 -84311585 + AT_rich Low_complexity Low_complexity 1 32 0 2 731 195 261 0 0 chr15 19183390 19183459 -84311515 + (TA)n Simple_repeat Simple_repeat 1 69 0 2 731 303 211 0 0 chr15 19183783 19183873 -84311101 + CT-rich Low_complexity Low_complexity 1 90 0 2 731 325 302 50 30 chr15 19183886 19183985 -84310989 - B1F SINE Alu -11 106 6 2 731 303 182 0 0 chr15 19184038 19184115 -84310859 + CT-rich Low_complexity Low_complexity 2 78 0 2 731 23 0 0 0 chr15 19184176 19184199 -84310775 + AT_rich Low_complexity Low_complexity 1 23 0 2 731 423 0 0 0 chr15 19184688 19184735 -84310239 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 731 250 372 73 33 chr15 19184868 19185018 -84309956 + MLT1A1 LTR MaLR 46 201 -207 2 731 623 271 28 0 chr15 19185041 19185218 -84309756 + Lx5 LINE L1 6869 7050 0 2 731 24 0 0 0 chr15 19185614 19185638 -84309336 + AT_rich Low_complexity Low_complexity 1 24 0 2 731 273 151 0 0 chr15 19186272 19186325 -84308649 + T-rich Low_complexity Low_complexity 1 53 0 2 731 372 307 69 17 chr15 19186774 19186890 -84308084 - RSINE1 SINE B4 0 165 44 2 731 315 248 39 29 chr15 19187120 19187224 -84307750 - Lx4B LINE L1 -4 7054 6950 2 731 1372 198 69 34 chr15 19187238 19187588 -84307386 - Lx4B LINE L1 -286 6772 6411 2 731 261 0 0 0 chr15 19187905 19187934 -84307040 + (TA)n Simple_repeat Simple_repeat 2 30 0 2 731 396 0 0 0 chr15 19188108 19188152 -84306822 + (GA)n Simple_repeat Simple_repeat 1 44 0 2 731 552 102 0 0 chr15 19188458 19188556 -84306418 + (TC)n Simple_repeat Simple_repeat 1 98 0 2 731 252 86 0 0 chr15 19188556 19188591 -84306383 + (TATG)n Simple_repeat Simple_repeat 4 38 0 2 731 1173 180 25 0 chr15 19188593 19188837 -84306137 - L1_Mur2 LINE L1 -3087 2790 2541 2 731 513 0 0 0 chr15 19188946 19189003 -84305971 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 2 731 265 386 53 43 chr15 19189107 19189500 -84305474 - MERVL_2A-int LTR ERVL -833 4928 4532 2 731 312 27 0 0 chr15 19189537 19189574 -84305400 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 731 191 352 98 30 chr15 19190767 19190931 -84304043 + L2 LINE L2 2744 2918 -501 2 731 533 15 15 0 chr15 19190971 19191037 -84303937 + (TC)n Simple_repeat Simple_repeat 2 68 0 2 731 3909 183 110 78 chr15 19191127 19192118 -84302856 + RLTR13D2 LTR ERVK 1 1023 0 2 731 543 182 46 31 chr15 19193013 19193143 -84301831 + L1_Mur2 LINE L1 2566 2697 -3186 2 731 527 120 0 0 chr15 19193150 19193225 -84301749 - L1_Mus1 LINE L1 -680 5887 5813 2 731 979 162 50 5 chr15 19193220 19193418 -84301556 - Lx LINE L1 -155 6499 6293 2 731 366 23 0 0 chr15 19193528 19193571 -84301403 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 731 4280 10 2 0 chr15 19193897 19194378 -84300596 + LTRIS_Mm LTR ERV1 1 482 0 2 731 1096 71 0 0 chr15 19194472 19194612 -84300362 + B1_Mus1 SINE Alu 2 141 -7 2 731 258 32 0 0 chr15 19194614 19194645 -84300329 + (A)n Simple_repeat Simple_repeat 1 31 0 2 731 353 188 0 12 chr15 19194826 19194912 -84300062 + C-rich Low_complexity Low_complexity 5 89 0 2 731 2487 174 44 47 chr15 19195078 19195627 -84299347 + Lx LINE L1 6107 6653 -1 2 731 246 309 22 22 chr15 19195908 19196047 -84298927 + (TATG)n Simple_repeat Simple_repeat 3 141 0 2 731 495 0 0 0 chr15 19196530 19196585 -84298389 + (TC)n Simple_repeat Simple_repeat 2 56 0 2 731 683 239 77 32 chr15 19196749 19196996 -84297978 - Lx7 LINE L1 -1 7695 7438 2 731 627 51 0 0 chr15 19197142 19197221 -84297753 + (TC)n Simple_repeat Simple_repeat 2 80 0 2 731 34 24 0 0 chr15 19197752 19197793 -84297181 + AT_rich Low_complexity Low_complexity 1 41 0 2 731 243 171 0 0 chr15 19198197 19198238 -84296736 - Lx7 LINE L1 -1985 5711 5671 2 731 255 250 25 12 chr15 19198237 19198318 -84296656 - L1MD LINE L1 -599 5643 5562 2 731 190 116 23 23 chr15 19198359 19198403 -84296571 + CT-rich Low_complexity Low_complexity 2 45 0 2 731 560 218 21 4 chr15 19198405 19198555 -84296419 - Lx7 LINE L1 -758 5482 5318 2 731 266 125 50 0 chr15 19198863 19198943 -84296031 + (TA)n Simple_repeat Simple_repeat 1 84 0 2 731 542 219 35 0 chr15 19198943 19199057 -84295917 - B1_Mus1 SINE Alu -9 139 22 2 731 4193 237 57 32 chr15 19199079 19199330 -84295644 - Lx7 LINE L1 -605 5275 4996 2 731 1849 179 43 30 chr15 19199330 19199728 -84295246 + MTB_Mm LTR MaLR 3 405 -2 2 731 4193 237 57 32 chr15 19199728 19200825 -84294149 - Lx7 LINE L1 -885 4995 3895 2 731 3253 193 107 6 chr15 19201228 19201944 -84293030 + Lx3C LINE L1 6201 7002 -6 2 731 22 0 0 0 chr15 19202906 19202928 -84292046 + AT_rich Low_complexity Low_complexity 1 22 0 2 731 318 352 77 15 chr15 19203037 19203233 -84291741 + MLT1A0 LTR MaLR 156 363 -2 2 731 3099 3 0 0 chr15 19203916 19204264 -84290710 + L1Md_T LINE L1 6235 6582 0 2 731 200 102 0 169 chr15 19204480 19204539 -84290435 + A-rich Low_complexity Low_complexity 1 49 0 2 731 427 290 29 103 chr15 19207607 19207811 -84287163 + B3A SINE B2 10 198 0 2 731 441 0 0 0 chr15 19207906 19207955 -84287019 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 731 237 65 0 0 chr15 19207960 19207991 -84286983 + (TCC)n Simple_repeat Simple_repeat 3 33 0 2 731 273 394 44 0 chr15 19208343 19208546 -84286428 - MER63C DNA AcHobo -260 670 459 2 731 539 340 54 49 chr15 19208546 19208820 -84286154 - Lx8 LINE L1 -263 7210 6932 2 731 1616 47 0 0 chr15 19208820 19209011 -84285963 + B2_Mm1t SINE B2 1 191 -2 2 731 539 340 54 49 chr15 19209011 19209085 -84285889 - Lx8 LINE L1 -542 6931 6860 2 731 2218 97 0 2 chr15 19209085 19209483 -84285491 + L1_Mur1 LINE L1 1017 1412 -4474 2 731 1177 238 101 16 chr15 19209797 19210182 -84284792 - Lx9 LINE L1 0 7644 7227 2 731 34 55 0 0 chr15 19210236 19210291 -84284683 + AT_rich Low_complexity Low_complexity 1 55 0 2 731 326 318 68 45 chr15 19211283 19211775 -84283199 + L1MB5 LINE L1 4975 5484 -828 2 731 517 313 37 7 chr15 19211808 19211943 -84283031 + RSINE1 SINE B4 21 159 -6 2 731 459 0 0 0 chr15 19211946 19211997 -84282977 + (TAAAA)n Simple_repeat Simple_repeat 5 55 0 2 731 215 108 77 0 chr15 19211998 19212063 -84282911 + A-rich Low_complexity Low_complexity 1 70 0 2 731 325 269 76 0 chr15 19212180 19212299 -84282675 + L1MB5 LINE L1 5617 5744 -445 2 731 1412 96 5 14 chr15 19212404 19212625 -84282349 + L1_Mus3 LINE L1 6413 6631 -7 3 731 247 262 81 73 chr15 19212647 19212783 -84282191 + L1MB5 LINE L1 5849 5985 -189 2 731 2233 122 3 0 chr15 19212903 19213224 -84281750 - ORR1A2 LTR MaLR -5 322 1 3 731 9482 158 31 6 chr15 19213224 19214971 -84280003 - ORR1A2-int LTR MaLR 0 1792 1 3 731 2040 125 21 59 chr15 19214971 19215311 -84279663 - ORR1A2 LTR MaLR 0 327 1 3 731 549 270 69 30 chr15 19215370 19215572 -84279402 + B3A SINE B2 2 211 -5 3 731 2620 88 23 3 chr15 19215822 19216174 -84278800 - RLTR10D LTR ERVK 0 359 1 3 731 49899 71 10 17 chr15 19216174 19217075 -84277899 - IAP-d-int LTR ERVK 0 6542 5673 3 731 2643 68 11 8 chr15 19217075 19217434 -84277540 + L1Md_F2 LINE L1 6221 6580 -2 3 731 49899 71 10 17 chr15 19217434 19223117 -84271857 - IAP-d-int LTR ERVK -870 5672 3 3 731 2610 89 32 0 chr15 19223119 19223467 -84271507 - RLTR10D LTR ERVK 0 359 1 3 731 436 318 97 84 chr15 19223578 19224031 -84270943 - RLTR11A2 LTR ERVK -68 459 1 3 731 1243 23 29 0 chr15 19224452 19224623 -84270351 + (TG)n Simple_repeat Simple_repeat 2 177 0 3 731 4979 90 1 3 chr15 19225066 19225757 -84269217 - L1_Mus4 LINE L1 0 6636 5947 3 731 427 273 166 0 chr15 19225794 19225933 -84269041 - B3 SINE B2 -9 207 46 3 731 1214 340 109 14 chr15 19225934 19226640 -84268334 + Lx8 LINE L1 6346 7118 -355 3 731 33069 89 14 8 chr15 19226884 19232918 -84262056 - L1Md_F2 LINE L1 0 6582 508 3 731 525 237 8 0 chr15 19232920 19233038 -84261936 - L1Md_F2 LINE L1 -5987 629 511 3 731 213 39 0 0 chr15 19233573 19233599 -84261375 + (TATAA)n Simple_repeat Simple_repeat 2 27 0 3 731 258 106 0 0 chr15 19233728 19233775 -84261199 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 3 731 342 143 0 0 chr15 19234674 19234737 -84260237 + (CCAA)n Simple_repeat Simple_repeat 1 63 0 3 731 299 121 0 17 chr15 19237037 19237096 -84257878 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 731 369 109 0 0 chr15 19237287 19237342 -84257632 - Lx3C LINE L1 -1138 5838 5784 3 731 2693 119 17 2 chr15 19237352 19237764 -84257210 - Lx LINE L1 -7 6647 6230 3 731 21 0 0 0 chr15 19239093 19239114 -84255860 + AT_rich Low_complexity Low_complexity 1 21 0 3 731 4582 78 18 10 chr15 19239187 19239808 -84255166 - L1_Mus2 LINE L1 -3 6563 5938 3 731 784 214 14 107 chr15 19239815 19240030 -84254944 - RLTR24 LTR ERV1 -334 195 1 3 731 2535 193 89 47 chr15 19240030 19240110 -84254864 + L1_Mur2 LINE L1 4199 4276 -1604 3 731 6711 159 32 24 chr15 19240110 19241345 -84253629 + Lx2A1 LINE L1 5757 7001 -7 3 731 2535 193 89 47 chr15 19241345 19241949 -84253025 + L1_Mur2 LINE L1 4277 4912 -968 3 731 1732 272 55 52 chr15 19241952 19242533 -84252441 + Lx7 LINE L1 6142 6724 -972 3 731 5665 45 0 0 chr15 19242539 19243224 -84251750 + L1Md_T LINE L1 5896 6580 -2 3 731 1863 177 31 0 chr15 19243302 19243653 -84251321 + L1_Mur2 LINE L1 4896 5257 -620 3 731 1461 160 104 0 chr15 19243655 19243923 -84251051 - Lx2 LINE L1 -35 5842 5547 3 731 6835 127 16 33 chr15 19243923 19245070 -84249904 + Lx2 LINE L1 5864 6990 -7 3 731 2851 172 61 45 chr15 19245086 19245712 -84249262 + L1_Mur2 LINE L1 5235 5870 -7 3 731 578 203 28 42 chr15 19245732 19245876 -84249098 - Lx4B LINE L1 -350 6708 6567 3 731 1089 102 0 0 chr15 19247700 19247847 -84247127 + B1_Mus2 SINE Alu 1 147 0 3 731 330 265 30 30 chr15 19248003 19248104 -84246870 - MLT1H2 LTR MaLR -319 170 70 3 731 753 289 45 64 chr15 19248452 19248810 -84246164 - RLTR23 LTR ERV1 0 430 80 3 731 506 236 0 9 chr15 19248877 19248984 -84245990 - RLTR23 LTR ERV1 -317 113 8 3 731 728 248 49 33 chr15 19249866 19250139 -84244835 - Lx4B LINE L1 -6 7052 6677 3 731 21 0 0 0 chr15 19250141 19250162 -84244812 + AT_rich Low_complexity Low_complexity 1 21 0 3 731 330 313 0 180 chr15 19250943 19251126 -84243848 + RLTR23 LTR ERV1 8 157 -273 3 731 541 311 16 5 chr15 19251352 19251536 -84243438 + L1_Mur3 LINE L1 343 528 -7200 3 731 3535 211 84 62 chr15 19251575 19251958 -84243016 + L1_Mur3 LINE L1 2897 3266 -2614 3 731 1222 126 10 16 chr15 19251958 19252151 -84242823 + B2_Mm1t SINE B2 2 193 0 3 731 3535 211 84 62 chr15 19252151 19252991 -84241983 + L1_Mur3 LINE L1 3267 4147 -1733 3 731 5165 107 21 13 chr15 19252989 19254413 -84240561 + L1Md_F2 LINE L1 357 1792 -4091 3 731 2880 91 0 0 chr15 19254428 19254833 -84240141 + L1Md_F2 LINE L1 2450 2854 -3029 3 731 7617 79 14 1 chr15 19254829 19255860 -84239114 + L1Md_F2 LINE L1 4542 5586 -297 3 731 7073 87 15 2 chr15 19255860 19256839 -84238135 + L1Md_F2 LINE L1 5587 6578 -4 3 731 3237 211 57 42 chr15 19256839 19257511 -84237463 + L1_Mur3 LINE L1 4136 4823 -1057 3 731 180 0 0 0 chr15 19257511 19257531 -84237443 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 731 3237 211 57 42 chr15 19257531 19257737 -84237237 + L1_Mur3 LINE L1 4824 5037 -843 3 731 2525 179 88 75 chr15 19257737 19258126 -84236848 + RMER6C LTR ERVK 1 376 -314 3 731 642 60 0 0 chr15 19258126 19258209 -84236765 + (GA)n Simple_repeat Simple_repeat 1 83 0 3 731 2525 179 88 75 chr15 19258209 19258497 -84236477 + RMER6C LTR ERVK 377 687 -3 3 731 3237 211 57 42 chr15 19258497 19258560 -84236414 + L1_Mur3 LINE L1 5038 5092 -788 3 731 1120 205 55 11 chr15 19258559 19258830 -84236144 + L1_Mur3 LINE L1 4892 5174 -706 3 731 4156 192 72 19 chr15 19258842 19259687 -84235287 - RMER19B LTR ERVK -12 890 1 3 731 517 167 63 28 chr15 19259687 19259824 -84235150 + L1_Mur3 LINE L1 5169 5311 -569 3 731 701 85 9 0 chr15 19259824 19259930 -84235044 + (GA)n Simple_repeat Simple_repeat 2 108 0 3 731 1936 283 29 8 chr15 19259930 19260442 -84234532 + Lx6 LINE L1 6934 7456 -4 3 731 21 36 0 0 chr15 19260463 19260491 -84234483 + AT_rich Low_complexity Low_complexity 1 28 0 3 731 213 108 0 0 chr15 19261079 19261116 -84233858 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 731 2638 142 7 16 chr15 19261979 19262414 -84232560 + Lx3B LINE L1 6538 6968 -5 3 731 405 192 59 118 chr15 19263257 19263393 -84231581 - MER74C LTR ERVL -11 449 322 3 731 257 360 71 18 chr15 19263531 19263547 -84231427 + B1F SINE Alu 25 47 -102 3 731 222 37 0 0 chr15 19263547 19263574 -84231400 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 3 731 257 360 71 18 chr15 19263574 19263670 -84231304 + B1F SINE Alu 48 142 -7 3 731 462 101 0 0 chr15 19263966 19264035 -84230939 + (GGGGA)n Simple_repeat Simple_repeat 5 73 0 3 731 234 162 40 0 chr15 19264108 19264182 -84230792 + GA-rich Low_complexity Low_complexity 5 81 0 3 731 4435 29 2 0 chr15 19264254 19264777 -84230197 - L1Md_F2 LINE L1 -13 6569 6046 3 731 1258 200 42 11 chr15 19265075 19265338 -84229636 + RLTR12B LTR ERVK 258 528 0 3 731 570 271 8 179 chr15 19265338 19265586 -84229388 - MT2A LTR ERVL -316 217 13 3 731 398 329 24 30 chr15 19265968 19266137 -84228837 - Lx8 LINE L1 -205 7268 7101 3 731 465 76 0 0 chr15 19266178 19266244 -84228730 + (CA)n Simple_repeat Simple_repeat 1 66 0 3 731 21 0 0 0 chr15 19266259 19266280 -84228694 + AT_rich Low_complexity Low_complexity 1 21 0 3 731 2349 71 0 0 chr15 19266923 19267231 -84227743 + L1_Mus2 LINE L1 6258 6565 -1 3 731 727 30 30 10 chr15 19267237 19267338 -84227636 + (GAAAA)n Simple_repeat Simple_repeat 3 105 0 3 91 1177 90 6 6 chr15 19267432 19267610 -84227364 + (TTTCC)n Simple_repeat Simple_repeat 3 180 0 3 732 339 132 0 0 chr15 19267621 19267689 -84227285 + (TCCCC)n Simple_repeat Simple_repeat 4 71 0 3 732 200 79 53 0 chr15 19267686 19267724 -84227250 + (TTTTC)n Simple_repeat Simple_repeat 2 41 0 3 732 266 349 27 111 chr15 19267757 19268018 -84226956 - Lx7 LINE L1 -975 6721 6483 3 732 573 115 0 0 chr15 19268042 19268129 -84226845 + (TA)n Simple_repeat Simple_repeat 2 88 0 3 732 25 31 0 0 chr15 19268245 19268277 -84226697 + AT_rich Low_complexity Low_complexity 1 32 0 3 732 29 0 0 0 chr15 19268299 19268328 -84226646 + AT_rich Low_complexity Low_complexity 1 29 0 3 732 617 284 37 14 chr15 19268385 19268599 -84226375 - Lx9 LINE L1 -271 7373 7155 3 732 529 90 11 11 chr15 19268614 19268704 -84226270 + (TA)n Simple_repeat Simple_repeat 1 90 0 3 732 26 82 0 12 chr15 19268930 19268981 -84225993 + AT_rich Low_complexity Low_complexity 1 51 0 3 732 6073 97 11 0 chr15 19268981 19269840 -84225134 - Lx3_Mus LINE L1 0 7009 6142 3 732 26 82 0 12 chr15 19269840 19269874 -84225100 + AT_rich Low_complexity Low_complexity 1 34 0 3 732 605 216 174 10 chr15 19270341 19270542 -84224432 + Lx9 LINE L1 7409 7642 -2 3 732 27 29 0 0 chr15 19270790 19270824 -84224150 + AT_rich Low_complexity Low_complexity 1 34 0 3 732 252 339 80 51 chr15 19272016 19272153 -84222821 - ID_B1 SINE B4 -7 217 77 3 732 1003 224 44 10 chr15 19272321 19272524 -84222450 - URR1B DNA MER1_type 0 225 16 3 732 1182 48 41 12 chr15 19273084 19273254 -84221720 - L1Md_F2 LINE L1 -12 6570 6396 3 732 996 269 43 26 chr15 19273264 19273569 -84221405 - Lx7 LINE L1 -428 7268 6959 3 732 578 212 18 0 chr15 19273761 19273874 -84221100 + B3 SINE B2 2 116 -100 3 732 372 22 0 0 chr15 19273882 19273927 -84221047 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 732 678 65 0 0 chr15 19273927 19274018 -84220956 + (GA)n Simple_repeat Simple_repeat 2 93 0 3 732 782 313 24 30 chr15 19275224 19275596 -84219378 + ORR1D2 LTR MaLR 1 370 0 3 732 3434 126 24 2 chr15 19275631 19276164 -84218810 + Lx3B LINE L1 6425 6969 -4 3 732 25 0 0 0 chr15 19276164 19276189 -84218785 + AT_rich Low_complexity Low_complexity 1 25 0 3 732 278 364 84 32 chr15 19276218 19276408 -84218566 + MTEa LTR MaLR 63 262 -117 3 732 536 309 7 13 chr15 19278014 19278168 -84216806 - RSINE1 SINE B4 0 165 13 3 732 27 49 0 0 chr15 19278222 19278263 -84216711 + AT_rich Low_complexity Low_complexity 1 41 0 3 732 205 136 102 0 chr15 19278284 19278343 -84216631 + (TTATA)n Simple_repeat Simple_repeat 3 67 0 3 732 1442 300 48 36 chr15 19278374 19278931 -84216043 + Lx9 LINE L1 6786 7349 -295 3 732 699 12 0 0 chr15 19278944 19279024 -84215950 + (GA)n Simple_repeat Simple_repeat 1 80 0 3 732 246 240 58 0 chr15 19279026 19279130 -84215844 + (TCTA)n Simple_repeat Simple_repeat 2 111 0 3 732 1166 68 0 0 chr15 19279164 19279312 -84215662 + B1_Mus1 SINE Alu 1 148 0 3 732 3260 255 51 19 chr15 19279431 19280471 -84214503 - Lx5 LINE L1 -23 7027 5911 3 732 611 290 115 18 chr15 19280851 19281069 -84213905 - ORR1D2 LTR MaLR -13 357 119 3 732 971 67 0 0 chr15 19281161 19281280 -84213694 - L1_Mm LINE L1 -241 5642 5524 3 732 503 37 24 36 chr15 19281281 19281365 -84213609 + L1Md_F2 LINE L1 6487 6569 -13 3 732 251 324 0 0 chr15 19281490 19281564 -84213410 - ORR1D2 LTR MaLR -293 77 4 3 732 1147 318 139 37 chr15 19282356 19283345 -84211629 - Lx9 LINE L1 -25 7619 6530 3 732 257 322 46 0 chr15 19283361 19283448 -84211526 - Lx9 LINE L1 -1182 6462 6372 3 732 325 234 12 19 chr15 19283464 19283625 -84211349 + (TA)n Simple_repeat Simple_repeat 2 161 0 3 732 224 170 0 19 chr15 19283691 19283745 -84211229 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 3 732 485 282 65 35 chr15 19283748 19283979 -84210995 + L1_Rod LINE L1 5316 5553 -294 3 732 4525 192 76 11 chr15 19284063 19284838 -84210136 + RLTR25B LTR ERVK 19 831 -197 3 732 657 25 0 0 chr15 19284838 19284917 -84210057 + (GA)n Simple_repeat Simple_repeat 1 79 0 3 732 4525 192 76 11 chr15 19284917 19285089 -84209885 + RLTR25B LTR ERVK 832 1027 -1 3 732 744 174 19 13 chr15 19285108 19285265 -84209709 - Lx5 LINE L1 -1112 5938 5781 3 732 569 0 49 0 chr15 19285349 19285430 -84209544 + (TTATA)n Simple_repeat Simple_repeat 4 88 0 4 732 941 323 42 18 chr15 19285733 19286067 -84208907 - MTEa LTR MaLR -24 355 14 4 732 589 291 95 11 chr15 19286136 19286400 -84208574 - L1MD LINE L1 -658 5701 5416 4 732 306 258 126 48 chr15 19286588 19286755 -84208219 + B3A SINE B2 3 182 -16 4 732 497 196 0 11 chr15 19286755 19286936 -84208038 + (CA)n Simple_repeat Simple_repeat 1 179 0 4 732 4644 173 11 47 chr15 19287575 19287893 -84207081 + Lx4A LINE L1 6175 6491 -567 4 732 497 144 259 9 chr15 19287893 19288005 -84206969 + B1_Mus1 SINE Alu 1 140 -8 4 732 4644 173 11 47 chr15 19288005 19288603 -84206371 + Lx4A LINE L1 6492 7058 0 4 732 2328 156 0 44 chr15 19288750 19289179 -84205795 - Lx LINE L1 -2 6652 6243 4 732 1970 53 11 15 chr15 19289287 19289555 -84205419 - L1Md_F2 LINE L1 0 6582 6316 4 732 22 0 0 0 chr15 19289845 19289867 -84205107 + AT_rich Low_complexity Low_complexity 1 22 0 4 732 22 35 0 0 chr15 19290084 19290113 -84204861 + AT_rich Low_complexity Low_complexity 1 29 0 4 732 26 30 0 0 chr15 19290386 19290419 -84204555 + AT_rich Low_complexity Low_complexity 1 33 0 4 732 180 97 0 0 chr15 19290442 19290473 -84204501 + (T)n Simple_repeat Simple_repeat 1 31 0 4 732 24 32 0 0 chr15 19290980 19291011 -84203963 + AT_rich Low_complexity Low_complexity 1 31 0 4 732 271 374 90 24 chr15 19291044 19291299 -84203675 - MER2 DNA MER2_type -1 344 73 4 732 3644 58 14 62 chr15 19291314 19291832 -84203142 + MT2_Mm LTR ERVL 1 493 0 4 732 356 315 109 27 chr15 19293112 19293259 -84201715 - MTEb LTR MaLR -14 365 207 4 732 42 20 0 0 chr15 19293259 19293308 -84201666 + AT_rich Low_complexity Low_complexity 1 49 0 4 732 956 83 6 0 chr15 19293407 19293564 -84201410 + (CA)n Simple_repeat Simple_repeat 2 159 0 4 732 426 318 91 11 chr15 19293580 19293755 -84201219 - MTEb LTR MaLR -186 193 5 4 732 1294 362 88 48 chr15 19293767 19293896 -84201078 - MTE-int LTR MaLR -49 1531 1396 4 732 429 15 62 0 chr15 19293904 19293969 -84201005 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 4 732 877 62 0 212 chr15 19293969 19294144 -84200830 - B1_Mus2 SINE Alu -9 138 3 4 732 1294 362 88 48 chr15 19294144 19294927 -84200047 - MTE-int LTR MaLR -185 1395 583 4 732 324 0 0 0 chr15 19294972 19295008 -84199966 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 732 564 29 0 0 chr15 19295008 19295077 -84199897 + (GA)n Simple_repeat Simple_repeat 1 70 0 4 732 520 149 11 0 chr15 19295079 19295166 -84199808 + ORR1C1 LTR MaLR 8 95 -283 4 732 341 277 41 16 chr15 19295343 19295464 -84199510 - RLTR45-int LTR ERVK -6940 304 181 4 732 563 271 46 15 chr15 19296030 19296161 -84198813 - ETnERV2-int LTR ERVK -202 7204 7070 4 732 1210 182 138 8 chr15 19296162 19296438 -84198536 + ORR1C1 LTR MaLR 55 378 0 4 732 212 359 0 0 chr15 19296487 19296551 -84198423 - PB1D9 SINE Alu -55 65 2 4 732 776 200 25 75 chr15 19296759 19296959 -84198015 + RMER13B LTR ERVK 67 256 -652 4 732 330 298 0 126 chr15 19296990 19297109 -84197865 + RMER13B LTR ERVK 682 785 -123 4 732 347 221 128 0 chr15 19297164 19297250 -84197724 - MTEa LTR MaLR -255 124 28 4 732 406 241 125 33 chr15 19297989 19298109 -84196865 - MTD LTR MaLR -36 383 253 4 732 1112 207 118 118 chr15 19298169 19298591 -84196383 - Lx9 LINE L1 -1 7643 7221 4 732 2603 131 52 40 chr15 19298591 19299067 -84195907 + RLTR45 LTR ERVK 1 482 0 4 732 1112 207 118 118 chr15 19299067 19299093 -84195881 - Lx9 LINE L1 -424 7220 7195 4 732 1531 227 65 81 chr15 19299112 19299455 -84195519 + RLTR11A LTR ERVK 17 354 -174 4 732 1289 87 58 26 chr15 19299455 19299644 -84195330 + B2_Mm2 SINE B2 1 195 0 4 732 1531 227 65 81 chr15 19299644 19299804 -84195170 + RLTR11A LTR ERVK 355 512 -16 4 732 622 259 28 39 chr15 19299823 19299927 -84195047 - Lx9 LINE L1 -444 7200 7100 4 732 2664 84 62 123 chr15 19299927 19300440 -84194534 + RLTR45 LTR ERVK 1 482 0 4 732 622 259 28 39 chr15 19300440 19300516 -84194458 - Lx9 LINE L1 -545 7099 7022 4 732 1131 62 7 0 chr15 19300532 19300676 -84194298 + B1_Mm SINE Alu 2 146 -1 4 732 237 98 0 0 chr15 19300678 19300719 -84194255 + (CAA)n Simple_repeat Simple_repeat 2 42 0 4 732 290 352 31 16 chr15 19300741 19300868 -84194106 - MTD LTR MaLR -239 180 52 4 732 252 185 0 69 chr15 19301283 19301341 -84193633 + PB1D9 SINE Alu 67 120 0 4 732 3447 101 52 48 chr15 19302112 19302597 -84192377 + RMER2 LTR ERV1 4 498 -69 4 732 1016 88 0 0 chr15 19302597 19302733 -84192241 + B1_Mus1 SINE Alu 2 137 -11 4 732 207 0 0 0 chr15 19302733 19302756 -84192218 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 732 3447 101 52 48 chr15 19302756 19302831 -84192143 + RMER2 LTR ERV1 499 566 -1 4 732 26 0 0 0 chr15 19303370 19303396 -84191578 + AT_rich Low_complexity Low_complexity 1 26 0 4 732 422 98 91 0 chr15 19305076 19305165 -84189809 - B1_Mm SINE Alu -2 145 6 4 732 243 189 0 0 chr15 19305133 19305170 -84189804 - ID_B1 SINE B4 -106 118 82 4 732 213 211 0 0 chr15 19305230 19305282 -84189692 + GA-rich Low_complexity Low_complexity 2 53 0 4 732 831 97 14 7 chr15 19305378 19305524 -84189450 + (TTTC)n Simple_repeat Simple_repeat 4 150 0 4 732 1178 296 59 12 chr15 19305545 19305966 -84189008 - Lx6 LINE L1 -2 7458 7018 4 732 1469 68 5 0 chr15 19305996 19306186 -84188788 + B2_Mm1t SINE B2 1 191 -2 4 732 306 129 0 0 chr15 19306187 19306249 -84188725 + (A)n Simple_repeat Simple_repeat 1 62 0 4 732 463 311 88 51 chr15 19306279 19306553 -84188421 - Lx8 LINE L1 -263 7210 6927 4 732 1464 0 0 0 chr15 19306559 19306759 -84188215 + L1Md_T LINE L1 6412 6582 0 4 732 551 45 0 0 chr15 19307076 19307143 -84187831 + MT2C_Mm LTR ERVL 1 67 -408 4 732 2498 141 10 10 chr15 19307143 19307552 -84187422 - RLTR9E LTR ERVK 0 409 1 4 732 2792 53 95 0 chr15 19307552 19307930 -84187044 + MT2C_Mm LTR ERVL 62 475 0 4 732 2686 35 28 0 chr15 19308118 19308436 -84186538 - IAPLTR2b LTR ERVK 0 327 1 4 732 21 36 0 0 chr15 19308509 19308537 -84186437 + AT_rich Low_complexity Low_complexity 1 28 0 4 732 30 0 0 0 chr15 19308549 19308579 -84186395 + AT_rich Low_complexity Low_complexity 1 30 0 4 732 8682 184 61 49 chr15 19308972 19311689 -84183285 + Lx4B LINE L1 3980 6750 -308 4 732 621 0 0 0 chr15 19311689 19311758 -84183216 + (TA)n Simple_repeat Simple_repeat 2 70 0 4 732 4724 189 121 117 chr15 19311758 19312085 -84182889 + Lx4B LINE L1 6751 7054 -4 4 732 233 226 38 0 chr15 19312137 19312190 -84182784 + B4A SINE B4 43 97 -195 4 732 197 222 45 45 chr15 19312662 19312728 -84182246 + L3b LINE CR1 194 259 -223 4 732 334 238 122 19 chr15 19314111 19314218 -84180756 - ERVL-B4-int LTR ERVL -2779 2978 2861 4 732 350 306 89 9 chr15 19314242 19314466 -84180508 - ERVL-B4-int LTR ERVL -3013 2701 2460 4 732 258 32 0 0 chr15 19314528 19314559 -84180415 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 732 435 344 65 4 chr15 19314741 19314986 -84179988 + MLT1-int LTR MaLR 298 557 -814 4 732 808 198 135 0 chr15 19315175 19315367 -84179607 + RLTR11A LTR ERVK 1 218 -310 4 732 424 262 8 47 chr15 19315366 19315494 -84179480 + RLTR11A LTR ERVK 404 526 -2 4 732 294 333 81 43 chr15 19315671 19315856 -84179118 - MLT1C LTR MaLR -271 196 5 4 732 3052 20 0 0 chr15 19315902 19316248 -84178726 - ORR1A0 LTR MaLR 0 346 1 4 732 767 346 78 29 chr15 19318001 19318403 -84176571 - MER70A LTR ERVL 0 472 48 4 732 195 69 0 0 chr15 19318403 19318432 -84176542 + (TGG)n Simple_repeat Simple_repeat 3 31 0 4 732 767 346 78 29 chr15 19318432 19318478 -84176496 - MER70A LTR ERVL -425 47 2 4 732 4212 174 120 5 chr15 19318877 19319676 -84175298 + RMER19B LTR ERVK 7 897 -5 4 732 1989 150 314 2 chr15 19320079 19320534 -84174440 + RLTR25B LTR ERVK 108 704 -399 4 732 3281 29 0 0 chr15 19320534 19320915 -84174059 - L1Md_T LINE L1 -375 6207 5827 4 732 1138 61 31 0 chr15 19320915 19321078 -84173896 + L1Md_A LINE L1 6415 6582 0 4 732 843 191 128 5 chr15 19321078 19321289 -84173685 + RLTR25B LTR ERVK 617 853 -175 4 732 2353 225 33 38 chr15 19321461 19322048 -84172926 - RLTR1D LTR ERV1 -16 589 24 4 732 32 0 0 0 chr15 19322419 19322451 -84172523 + AT_rich Low_complexity Low_complexity 1 32 0 4 732 924 239 43 47 chr15 19322451 19322706 -84172268 + RLTR25B LTR ERVK 850 1103 0 4 732 459 92 0 0 chr15 19322747 19322812 -84172162 + (TA)n Simple_repeat Simple_repeat 1 65 0 4 732 280 361 61 20 chr15 19322847 19322946 -84172028 + PB1D10 SINE Alu 2 104 -13 4 732 225 0 0 0 chr15 19323030 19323055 -84171919 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 4 732 350 330 52 61 chr15 19323239 19323468 -84171506 + MLT1E2 LTR MaLR 393 619 -8 4 732 398 20 20 0 chr15 19323827 19323878 -84171096 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 4 732 6315 130 30 24 chr15 19323878 19324930 -84170044 - Lx3A LINE L1 -15 6966 5907 4 732 600 53 0 0 chr15 19324930 19325006 -84169968 + (TTTC)n Simple_repeat Simple_repeat 4 79 0 4 732 6315 130 30 24 chr15 19325006 19325046 -84169928 - Lx3A LINE L1 -1075 5906 5867 4 732 3420 171 55 28 chr15 19325046 19325720 -84169254 - RLTR17 LTR ERVK 0 692 1 4 732 21 0 0 0 chr15 19325804 19325825 -84169149 + AT_rich Low_complexity Low_complexity 1 21 0 4 732 1910 90 3 51 chr15 19326080 19326395 -84168579 - L1Md_F2 LINE L1 0 6582 6283 4 732 1223 106 17 0 chr15 19326396 19326575 -84168399 - B2_Mm1t SINE B2 -10 183 2 4 732 825 101 0 97 chr15 19327129 19327294 -84167680 - L1Md_F2 LINE L1 -2 6580 6432 4 732 237 33 0 0 chr15 19327440 19327470 -84167504 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 4 732 434 186 10 10 chr15 19327828 19327926 -84167048 - Lx6 LINE L1 -4 7456 7359 4 732 15876 76 1 4 chr15 19329483 19332347 -84162627 - L1Md_F2 LINE L1 -12 6570 3713 4 732 2469 50 6 212 chr15 19332353 19332839 -84162135 - RLTR10 LTR ERVK -4 386 1 4 732 16279 18 5 1 chr15 19332841 19334776 -84160198 - RLTR10-int LTR ERVK -3 1984 41 4 732 2502 50 6 212 chr15 19334792 19335278 -84159696 - RLTR10 LTR ERVK -4 386 1 4 732 3948 93 12 23 chr15 19335278 19335918 -84159056 - L1Md_F2 LINE L1 -2165 3718 3086 4 732 399 98 0 0 chr15 19336088 19336149 -84158825 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 732 276 258 0 83 chr15 19336428 19336500 -84158474 - PB1D9 SINE Alu -54 66 1 4 732 3524 249 32 11 chr15 19336911 19337544 -84157430 - Lx6 LINE L1 -172 7288 6656 4 732 531 0 0 0 chr15 19337544 19337603 -84157371 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 732 3524 249 32 11 chr15 19337603 19337902 -84157072 - Lx6 LINE L1 -805 6655 6337 4 732 21 0 0 0 chr15 19338563 19338584 -84156390 + AT_rich Low_complexity Low_complexity 1 21 0 4 732 537 176 0 0 chr15 19340918 19341026 -84153948 + (TA)n Simple_repeat Simple_repeat 2 109 0 4 732 219 146 0 0 chr15 19341067 19341108 -84153866 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 732 242 341 23 39 chr15 19341118 19341246 -84153728 - RMER12 LTR ERVK -466 856 731 4 732 377 265 30 20 chr15 19341223 19341323 -84153651 - B4A SINE B4 -48 244 144 4 732 1788 234 24 38 chr15 19342920 19343224 -84151750 - MTC LTR MaLR -9 412 107 5 732 1356 92 11 0 chr15 19343224 19343408 -84151566 + B2_Mm1t SINE B2 1 186 -7 5 732 1788 234 24 38 chr15 19343408 19343521 -84151453 - MTC LTR MaLR -315 106 1 5 732 405 58 0 0 chr15 19343969 19344021 -84150953 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 732 828 125 86 22 chr15 19344158 19344297 -84150677 - B1_Mus1 SINE Alu 0 148 1 5 732 431 208 8 102 chr15 19344194 19344312 -84150662 - MT2B LTR ERVL -344 257 151 5 732 2626 99 27 0 chr15 19344322 19344687 -84150287 + L1_Mus1 LINE L1 6190 6564 -3 5 732 629 317 23 51 chr15 19345137 19345353 -84149621 + B3 SINE B2 2 211 -5 5 732 6352 130 19 9 chr15 19345502 19346635 -84148339 - Lx LINE L1 -5 6649 5506 5 732 627 312 70 30 chr15 19347290 19347789 -84147185 - L1M3 LINE L1 -749 5391 4873 5 732 215 155 17 0 chr15 19348224 19348254 -84146720 + A-rich Low_complexity Low_complexity 1 31 0 5 732 186 43 0 0 chr15 19348254 19348277 -84146697 + (CAAAC)n Simple_repeat Simple_repeat 3 25 0 5 732 215 155 17 0 chr15 19348277 19348304 -84146670 + A-rich Low_complexity Low_complexity 32 58 0 5 732 413 370 75 4 chr15 19348374 19348629 -84146345 + RMER15 LTR ERVL 301 573 -2 5 732 1741 271 58 56 chr15 19348726 19348805 -84146169 + Lx6 LINE L1 5726 5785 -1265 5 732 491 215 88 7 chr15 19348805 19348941 -84146033 + B1_Mus1 SINE Alu 2 148 0 5 732 2205 270 87 53 chr15 19348941 19350330 -84144644 + Lx6 LINE L1 5786 7460 0 5 732 1090 248 134 10 chr15 19350808 19351106 -84143868 + ORR1D1 LTR MaLR 1 335 -39 5 732 3103 23 209 0 chr15 19351375 19351768 -84143206 - IAPLTR2_Mm LTR ERVK 0 475 1 5 732 427 258 32 0 chr15 19352170 19352294 -84142680 + Lx8 LINE L1 7156 7283 -190 5 732 270 0 0 0 chr15 19355403 19355433 -84139541 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 732 558 133 0 0 chr15 19355435 19355548 -84139426 + (GA)n Simple_repeat Simple_repeat 2 114 0 5 732 588 308 44 85 chr15 19355552 19355868 -84139106 - MT2B LTR ERVL -61 540 238 5 732 3277 222 41 14 chr15 19355954 19356790 -84138184 - MERVL_2A-int LTR ERVL 0 5761 4904 5 732 216 200 0 0 chr15 19356791 19356836 -84138138 + T-rich Low_complexity Low_complexity 5 49 0 5 732 337 201 0 68 chr15 19356874 19356961 -84138013 - MERVL_2A-int LTR ERVL -735 4750 4609 5 732 1024 253 44 15 chr15 19356965 19357238 -84137736 - MERVL_2A-int LTR ERVL -1393 4368 4088 5 732 3915 227 144 18 chr15 19357236 19357624 -84137350 - MERVL_2A-int LTR ERVL -2454 3307 2868 5 732 2012 59 4 15 chr15 19357624 19357898 -84137076 + L1Md_F2 LINE L1 6311 6581 -1 5 732 3915 220 38 28 chr15 19357898 19358050 -84136924 - MERVL_2A-int LTR ERVL -2894 2867 2719 5 732 2355 43 7 20 chr15 19358050 19358356 -84136618 - L1Md_F3 LINE L1 0 6584 6283 5 732 3915 225 96 21 chr15 19358356 19359422 -84135552 - MERVL_2A-int LTR ERVL -3043 2718 1571 5 732 331 301 64 25 chr15 19359424 19359581 -84135393 - Lx8 LINE L1 -605 6868 6706 5 732 1125 281 75 36 chr15 19359582 19360039 -84134935 - RMER20A LTR ERVK 0 516 8 5 732 856 315 28 55 chr15 19360044 19360554 -84134420 - Lx8 LINE L1 -994 6702 6188 5 732 1762 198 67 25 chr15 19360554 19360958 -84134016 - MTC LTR MaLR 0 421 1 5 732 545 330 82 73 chr15 19360958 19361048 -84133926 - Lx8 LINE L1 -1509 6187 6098 5 732 256 268 12 0 chr15 19361230 19361312 -84133662 + Lx8 LINE L1 5211 5293 -587 5 732 840 280 96 8 chr15 19361330 19361683 -84133291 - Lx9 LINE L1 -351 7293 6910 5 732 793 221 154 0 chr15 19361685 19361964 -84133010 + Lx9 LINE L1 7319 7640 -4 5 732 599 287 88 29 chr15 19362016 19362425 -84132549 + Lx8 LINE L1 5331 5763 -117 5 732 2858 262 39 6 chr15 19362428 19363375 -84131599 - Lx2B LINE L1 -157 6843 6005 5 732 2007 132 50 28 chr15 19363379 19363737 -84131237 - RLTR9E LTR ERVK -43 366 1 5 732 7372 196 62 14 chr15 19363739 19365707 -84129267 - Lx2B LINE L1 -993 6007 3905 5 732 2118 236 66 8 chr15 19365715 19366139 -84128835 - L1_Mur1 LINE L1 -2040 1872 1409 5 732 221 0 0 33 chr15 19366139 19366169 -84128805 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 5 732 2118 233 16 45 chr15 19366169 19366795 -84128179 - L1_Mur1 LINE L1 -2504 1408 804 5 732 249 285 38 50 chr15 19366993 19367152 -84127822 + Lx8 LINE L1 5757 5913 -1560 5 732 382 347 22 45 chr15 19369062 19369240 -84125734 - B3A SINE B2 0 198 25 5 732 219 36 0 0 chr15 19370016 19370044 -84124930 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 5 732 3609 29 0 0 chr15 19370067 19370511 -84124463 - L1Md_F2 LINE L1 -408 6174 5731 5 732 2827 53 37 11 chr15 19370511 19370891 -84124083 + L1Md_F2 LINE L1 6190 6579 -3 5 732 449 308 72 87 chr15 19370925 19371203 -84123771 + MLT2C1 LTR ERVL 113 395 -2 5 732 2784 221 124 26 chr15 19371799 19372533 -84122441 - RMER21B LTR ERV1 -2 840 35 5 732 402 338 117 12 chr15 19373242 19373482 -84121492 + MLT1B LTR MaLR 111 375 -15 5 732 355 346 42 0 chr15 19373722 19373936 -84121038 + ERVL-B4-int LTR ERVL 4809 5031 -683 5 732 541 283 57 14 chr15 19373967 19374107 -84120867 + B1_Mur1 SINE Alu 1 146 -3 5 732 21 0 0 0 chr15 19374285 19374306 -84120668 + AT_rich Low_complexity Low_complexity 1 21 0 5 732 748 151 84 0 chr15 19374307 19374426 -84120548 + B1_Mus1 SINE Alu 2 130 -18 5 732 253 213 0 176 chr15 19374349 19374457 -84120517 + RLTR25A LTR ERVK 529 617 -486 5 732 4670 230 40 58 chr15 19374470 19374576 -84120398 + Lx5 LINE L1 5697 5791 -1259 5 732 1776 88 28 0 chr15 19374576 19374826 -84120148 + L1_Mus1 LINE L1 6311 6567 0 5 732 4670 230 40 58 chr15 19374826 19375972 -84119002 + Lx5 LINE L1 5792 6906 -144 5 732 270 0 0 0 chr15 19375972 19376002 -84118972 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 732 4670 230 40 58 chr15 19376002 19376123 -84118851 + Lx5 LINE L1 6907 7047 -3 5 732 2720 177 58 12 chr15 19376124 19376405 -84118569 + Lx5 LINE L1 5280 5555 -322 5 732 351 0 0 0 chr15 19376405 19376444 -84118530 + (CAAA)n Simple_repeat Simple_repeat 3 41 0 5 732 4842 219 52 18 chr15 19376444 19377672 -84117302 + Lx5 LINE L1 5556 6835 -215 5 732 27883 49 3 0 chr15 19377827 19381507 -84113467 + L1Md_F3 LINE L1 1896 5586 -297 5 732 7565 59 15 9 chr15 19381507 19381827 -84113147 + L1Md_F3 LINE L1 5587 5906 -678 5 732 3401 25 2 2 chr15 19381827 19382223 -84112751 + MTA_Mm LTR MaLR 1 396 0 5 732 9221 29 5 1 chr15 19382223 19383317 -84111657 + MTA_Mm-int LTR MaLR 1 1098 0 5 732 3401 25 2 2 chr15 19383317 19383713 -84111261 + MTA_Mm LTR MaLR 1 396 0 5 732 7565 59 15 9 chr15 19383713 19384382 -84110592 + L1Md_F3 LINE L1 5907 6582 -2 5 732 356 288 147 4 chr15 19386179 19386390 -84108584 + Lx5 LINE L1 6810 7050 0 5 732 847 112 0 14 chr15 19386501 19386646 -84108328 + (CA)n Simple_repeat Simple_repeat 2 144 0 5 732 406 353 20 48 chr15 19387184 19387434 -84107540 - MTEa LTR MaLR -44 335 93 5 732 447 281 25 81 chr15 19387450 19387614 -84107360 + MTEa LTR MaLR 243 405 -14 5 732 184 353 41 32 chr15 19387872 19387995 -84106979 + MIRb SINE MIR 81 204 -64 5 732 25 51 0 0 chr15 19388264 19388303 -84106671 + AT_rich Low_complexity Low_complexity 1 39 0 5 732 509 326 35 7 chr15 19389348 19389490 -84105484 + B3A SINE B2 15 160 -38 5 732 2881 84 15 39 chr15 19389496 19389905 -84105069 - MTB LTR MaLR -1 399 1 5 732 24 53 0 0 chr15 19390544 19390582 -84104392 + AT_rich Low_complexity Low_complexity 1 38 0 5 732 811 303 99 19 chr15 19390975 19391348 -84103626 - Lx8 LINE L1 -148 7325 6923 5 732 789 340 34 25 chr15 19391368 19391805 -84103169 - Lx8 LINE L1 -608 6865 6425 5 732 226 363 19 29 chr15 19391832 19391937 -84103037 - Lx9 LINE L1 -1137 6507 6404 5 732 1349 197 52 70 chr15 19392214 19392437 -84102537 + RMER20A LTR ERVK 1 208 -308 5 732 4784 160 15 1 chr15 19392437 19393236 -84101738 - Lx4A LINE L1 -6 7052 6243 5 732 1349 276 89 70 chr15 19393236 19393588 -84101386 + RMER20A LTR ERVK 206 596 -31 5 732 1777 161 63 30 chr15 19393647 19394043 -84100931 - RLTR9E LTR ERVK 0 409 1 5 732 6045 66 4 2 chr15 19394339 19395131 -84099843 - L1_Mus3 LINE L1 -4 6634 5842 5 732 227 250 53 53 chr15 19395411 19395487 -84099487 - MLT2B3 LTR ERVL -389 165 90 5 732 3720 137 39 16 chr15 19395949 19396572 -84098402 - Lx LINE L1 -3 6651 6015 5 732 2616 179 31 43 chr15 19396606 19397184 -84097790 + L1_Mm LINE L1 4504 5074 -809 5 732 191 62 0 59 chr15 19397930 19397964 -84097010 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 732 697 289 37 96 chr15 19397982 19398254 -84096720 - ORR1E LTR MaLR 0 359 104 5 91 2562 303 91 76 chr15 19398272 19399609 -84095365 - ORR1E-int LTR MaLR -13 1357 1 5 733 464 339 97 62 chr15 19399611 19399951 -84095023 - ORR1E LTR MaLR 0 359 8 5 733 261 57 0 0 chr15 19400425 19400460 -84094514 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 733 31 68 0 0 chr15 19401876 19401935 -84093039 + AT_rich Low_complexity Low_complexity 1 59 0 5 733 231 152 0 0 chr15 19402605 19402651 -84092323 + T-rich Low_complexity Low_complexity 1 46 0 5 733 895 174 10 42 chr15 19402653 19402845 -84092129 - Lx3C LINE L1 0 6976 6791 5 733 240 381 13 26 chr15 19403062 19403213 -84091761 + MLT1B LTR MaLR 224 372 -18 5 733 25 0 0 0 chr15 19403556 19403581 -84091393 + AT_rich Low_complexity Low_complexity 1 25 0 5 733 17238 7 0 0 chr15 19403860 19405814 -84089160 + L1Md_A LINE L1 3633 5586 -297 5 733 8719 16 1 0 chr15 19405814 19406808 -84088166 + L1Md_A LINE L1 5587 6581 -1 5 733 260 53 0 26 chr15 19406933 19406972 -84088002 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 733 887 68 14 0 chr15 19407224 19407371 -84087603 - RMER17B LTR ERVK -498 460 312 5 733 2091 56 0 7 chr15 19408582 19408851 -84086123 - L1Md_F3 LINE L1 -3 6581 6315 5 733 784 185 158 5 chr15 19409826 19409913 -84085061 + Lx2B LINE L1 6782 6868 -132 5 733 198 0 0 0 chr15 19409913 19409935 -84085039 + (TGGG)n Simple_repeat Simple_repeat 1 22 0 5 733 784 185 158 5 chr15 19409935 19410037 -84084937 + Lx2B LINE L1 6869 6999 -1 5 733 555 144 0 0 chr15 19410037 19410134 -84084840 + (GA)n Simple_repeat Simple_repeat 2 98 0 5 733 422 157 12 0 chr15 19410187 19410270 -84084704 + CT-rich Low_complexity Low_complexity 1 84 0 5 733 318 320 48 72 chr15 19410450 19410659 -84084315 + MLT-int LTR MaLR 1417 1620 -115 5 733 992 154 9 15 chr15 19411566 19411895 -84083079 + (CA)n Simple_repeat Simple_repeat 1 327 0 5 733 3241 104 2 8 chr15 19412473 19412948 -84082026 - L1_Mus4 LINE L1 0 6636 6165 5 733 368 200 66 11 chr15 19413049 19413140 -84081834 + ORR1D2 LTR MaLR 1 96 -274 5 733 317 316 22 15 chr15 19413164 19413299 -84081675 + ORR1D2 LTR MaLR 235 370 0 5 733 21 0 0 0 chr15 19413301 19413322 -84081652 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 2232 244 44 15 chr15 19413415 19413650 -84081324 + Lx5 LINE L1 6494 6734 -316 5 733 540 0 0 0 chr15 19413650 19413710 -84081264 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 733 2232 244 44 15 chr15 19413710 19413999 -84080975 + Lx5 LINE L1 6735 7033 -17 5 733 3338 95 6 4 chr15 19414003 19414479 -84080495 + L1_Mus2 LINE L1 6090 6566 0 5 733 180 0 0 0 chr15 19414535 19414555 -84080419 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 5 733 517 207 199 41 chr15 19415120 19415291 -84079683 + ORR1D1 LTR MaLR 177 374 0 5 733 788 316 125 39 chr15 19416082 19416546 -84078428 + RMER5 LTR ERV1 31 534 0 5 733 346 337 127 19 chr15 19416859 19417119 -84077855 + Lx8 LINE L1 6822 7109 -364 5 733 398 325 20 131 chr15 19417227 19417300 -84077674 + MTE2a LTR MaLR 1 69 -310 5 733 384 22 0 0 chr15 19417300 19417345 -84077629 + (TTA)n Simple_repeat Simple_repeat 2 46 0 5 733 398 325 20 131 chr15 19417345 19417568 -84077406 + MTE2a LTR MaLR 70 264 -115 5 733 332 315 70 70 chr15 19417719 19417934 -84077040 - MLT2D LTR ERVL -182 215 1 5 733 352 297 0 98 chr15 19418728 19418840 -84076134 - B3A SINE B2 -1 197 97 6 733 597 94 0 0 chr15 19419781 19419866 -84075108 + (TCCC)n Simple_repeat Simple_repeat 4 88 0 6 733 31331 77 4 1 chr15 19420087 19425121 -84069853 - L1Md_F2 LINE L1 0 6582 1533 6 733 2590 58 3 3 chr15 19425121 19425452 -84069522 + IAPEY_LTR LTR ERVK 55 385 0 6 733 2760 161 13 23 chr15 19425452 19426131 -84068843 + IAPEy-int LTR ERVK 1 1058 -6455 6 733 21407 48 11 4 chr15 19426131 19428823 -84066151 + IAPEy-int LTR ERVK 4804 7513 0 6 733 2604 55 3 3 chr15 19428823 19429154 -84065820 + IAPEY_LTR LTR ERVK 55 385 0 6 733 3429 97 9 18 chr15 19429157 19429964 -84065010 - L1Md_F LINE L1 -4348 1535 729 6 733 2907 67 0 3 chr15 19429972 19430349 -84064625 - L1Md_F2 LINE L1 -3 6579 6204 6 733 293 236 27 27 chr15 19430735 19430809 -84064165 + MTB_Mm LTR MaLR 194 267 -140 6 733 1005 60 0 0 chr15 19431955 19432088 -84062886 - L1_Mus1 LINE L1 -2 6565 6433 6 733 471 281 74 27 chr15 19432422 19432678 -84062296 - L1M2 LINE L1 -900 5243 4976 6 733 1305 83 0 0 chr15 19432843 19433023 -84061951 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 6 733 241 227 15 29 chr15 19433828 19433896 -84061078 - L1M5 LINE L1 -2082 4064 3998 6 733 333 0 0 0 chr15 19435340 19435377 -84059597 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 733 293 319 121 10 chr15 19435516 19435722 -84059252 + L1MC LINE L1 5532 5760 -2122 6 733 1192 68 0 0 chr15 19436866 19437013 -84057961 + B1_Mus2 SINE Alu 1 147 0 6 733 837 299 53 73 chr15 19437580 19437985 -84056989 - MTE2a LTR MaLR -14 405 1 6 733 384 285 55 50 chr15 19438173 19438360 -84056614 - Lx4B LINE L1 0 7058 6863 6 733 686 356 52 19 chr15 19438992 19439261 -84055713 - B4A SINE B4 -4 288 11 6 733 244 289 32 53 chr15 19439794 19439889 -84055085 - MER31A LTR ERV1 -177 308 216 6 733 242 262 104 19 chr15 19440639 19440734 -84054240 - ORR1E LTR MaLR -17 362 264 6 733 235 200 120 76 chr15 19440801 19440893 -84054081 - ORR1E LTR MaLR -241 126 31 6 733 845 359 82 55 chr15 19441002 19441695 -84053279 - MTE-int LTR MaLR -34 1546 835 6 733 218 105 0 26 chr15 19442022 19442061 -84052913 + (TTA)n Simple_repeat Simple_repeat 3 40 0 6 733 430 364 117 16 chr15 19442534 19442841 -84052133 - MTE-int LTR MaLR -13 1567 1230 6 733 363 44 0 0 chr15 19443133 19443178 -84051796 + (TCC)n Simple_repeat Simple_repeat 3 47 0 6 733 180 0 0 0 chr15 19444074 19444094 -84050880 + (CAGAGA)n Simple_repeat Simple_repeat 3 22 0 6 733 201 129 0 0 chr15 19444095 19444126 -84050848 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 6 733 22 35 0 0 chr15 19444476 19444505 -84050469 + AT_rich Low_complexity Low_complexity 1 29 0 6 733 3267 43 2 2 chr15 19444884 19445280 -84049694 - MTA_Mm LTR MaLR 0 396 1 6 733 8843 46 4 3 chr15 19445280 19446377 -84048597 - MTA_Mm-int LTR MaLR 0 1098 1 6 733 3083 32 45 3 chr15 19446377 19446757 -84048217 - MTA_Mm LTR MaLR 0 396 1 6 733 21 36 0 0 chr15 19447628 19447656 -84047318 + AT_rich Low_complexity Low_complexity 1 28 0 6 733 3598 109 14 4 chr15 19449247 19449797 -84045177 + Lx LINE L1 6098 6653 -1 6 733 31780 82 11 17 chr15 19450247 19455471 -84039503 + L1Md_F2 LINE L1 399 5586 -297 6 733 7695 65 1 9 chr15 19455471 19456071 -84038903 + L1Md_F2 LINE L1 5587 6186 -396 6 733 1495 43 27 0 chr15 19456071 19456255 -84038719 - B2_Mm1t SINE B2 -4 189 1 6 733 7695 65 1 9 chr15 19456255 19456658 -84038316 + L1Md_F2 LINE L1 6187 6582 0 6 733 23 0 0 0 chr15 19456660 19456683 -84038291 + AT_rich Low_complexity Low_complexity 1 23 0 6 733 483 18 0 0 chr15 19457617 19457673 -84037301 + (CATAT)n Simple_repeat Simple_repeat 2 57 0 6 733 2855 158 48 30 chr15 19457807 19458257 -84036717 + RLTR20A1 LTR ERVK 1 446 -105 6 733 480 59 0 0 chr15 19458257 19458325 -84036649 + (TG)n Simple_repeat Simple_repeat 2 69 0 6 733 2855 158 48 30 chr15 19458325 19458415 -84036559 + RLTR20A1 LTR ERVK 447 550 -1 6 733 1138 206 88 9 chr15 19458898 19459216 -84035758 + Lx9 LINE L1 7302 7644 0 6 733 26 50 0 0 chr15 19459268 19459308 -84035666 + AT_rich Low_complexity Low_complexity 1 40 0 6 733 22 56 0 0 chr15 19459691 19459727 -84035247 + AT_rich Low_complexity Low_complexity 1 36 0 6 733 264 311 14 0 chr15 19459893 19459967 -84035007 + B4A SINE B4 1 75 -217 6 733 741 23 0 0 chr15 19460088 19460175 -84034799 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 6 733 33567 93 18 5 chr15 19460395 19466844 -84028130 - L1Md_F2 LINE L1 -12 6570 32 6 733 811 313 58 29 chr15 19466844 19467008 -84027966 + RLTR40 LTR ERVK 127 296 -521 6 733 300 27 0 0 chr15 19467008 19467045 -84027929 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 733 811 313 58 29 chr15 19467045 19467294 -84027680 + RLTR40 LTR ERVK 297 551 -266 6 733 366 23 0 0 chr15 19467313 19467356 -84027618 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 733 1990 307 101 39 chr15 19467539 19469734 -84025240 + Lx9 LINE L1 4905 7439 -205 6 733 480 86 0 0 chr15 19469734 19469804 -84025170 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 733 1129 318 171 26 chr15 19469804 19469875 -84025099 + Lx9 LINE L1 7440 7517 -127 6 733 189 154 0 0 chr15 19469885 19469924 -84025050 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 733 747 152 0 0 chr15 19470141 19470279 -84024695 + Lx LINE L1 6511 6648 -6 6 733 23 68 0 0 chr15 19472118 19472162 -84022812 + AT_rich Low_complexity Low_complexity 1 44 0 6 733 1364 182 13 63 chr15 19472434 19472751 -84022223 - L1_Mur1 LINE L1 -3254 2632 2332 6 733 4502 189 52 6 chr15 19472756 19474217 -84020757 + Lx2B LINE L1 4935 6465 -535 6 733 183 42 0 0 chr15 19474217 19474241 -84020733 + (TTG)n Simple_repeat Simple_repeat 1 24 0 6 733 3615 267 77 38 chr15 19474241 19474710 -84020264 + Lx2B LINE L1 6475 6975 -1 6 733 231 125 0 0 chr15 19474792 19474832 -84020142 + (TTG)n Simple_repeat Simple_repeat 1 40 0 6 733 364 255 87 10 chr15 19474861 19474964 -84020010 - Lx7 LINE L1 -426 7270 7160 6 733 1979 252 4 22 chr15 19475002 19475493 -84019481 - Lx7 LINE L1 -863 6833 6352 6 733 22 35 0 0 chr15 19475627 19475656 -84019318 + AT_rich Low_complexity Low_complexity 1 29 0 6 733 2712 109 45 0 chr15 19476167 19476570 -84018404 + BGLII_Mus LTR ERVK 2 422 0 6 733 327 276 76 6 chr15 19476751 19476922 -84018052 - L1MC3 LINE L1 -690 7095 6913 6 733 312 83 0 0 chr15 19477525 19477573 -84017401 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 6 733 1043 67 0 29 chr15 19477573 19477711 -84017263 - B1_Mus2 SINE Alu -13 134 1 6 733 523 344 31 27 chr15 19477944 19478111 -84016863 - MER67D LTR ERV1 -248 266 104 6 733 2705 148 15 11 chr15 19478111 19478588 -84016386 + Lx LINE L1 6168 6646 -8 6 733 523 344 31 27 chr15 19478588 19478680 -84016294 - MER67D LTR ERV1 -411 103 7 6 733 4939 139 86 13 chr15 19480300 19481157 -84013817 + Lx2A1 LINE L1 6087 7006 -2 6 733 1005 124 11 11 chr15 19481186 19481366 -84013608 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 733 420 137 20 31 chr15 19481367 19481465 -84013509 + CT-rich Low_complexity Low_complexity 3 99 0 6 733 664 105 19 2 chr15 19481465 19481573 -84013401 - B1_Mus1 SINE Alu 0 120 2 6 733 371 227 32 113 chr15 19481573 19481614 -84013360 - MT2B LTR ERVL -444 157 127 6 733 32 75 0 0 chr15 19481829 19481896 -84013078 + AT_rich Low_complexity Low_complexity 1 67 0 6 733 944 120 14 21 chr15 19482299 19482444 -84012530 + B1_Mus2 SINE Alu 2 145 -2 6 733 210 162 0 0 chr15 19482446 19482483 -84012491 + A-rich Low_complexity Low_complexity 1 37 0 6 733 18111 91 115 7 chr15 19482701 19486320 -84008654 - L1Md_F2 LINE L1 -12 6570 2519 6 733 6630 24 1 0 chr15 19486320 19487099 -84007875 + L1Md_T LINE L1 4807 5586 -297 6 733 8424 32 1 1 chr15 19487099 19488094 -84006880 + L1Md_T LINE L1 5587 6581 -1 6 733 277 100 0 0 chr15 19488094 19488134 -84006840 - MusHAL1 LINE L1 -1384 1328 1289 6 733 29618 79 34 10 chr15 19488472 19493557 -84001417 + L1Md_F2 LINE L1 289 5589 -297 6 733 7728 60 5 2 chr15 19493557 19494550 -84000424 + L1Md_F2 LINE L1 5590 6585 0 6 733 28 29 0 0 chr15 19494665 19494700 -84000274 + AT_rich Low_complexity Low_complexity 1 35 0 6 733 1353 301 38 142 chr15 19494774 19495463 -83999511 - Lx5 LINE L1 -408 6642 6026 6 733 30 27 0 0 chr15 19496004 19496041 -83998933 + AT_rich Low_complexity Low_complexity 1 37 0 6 733 183 42 0 0 chr15 19496047 19496071 -83998903 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 733 818 147 57 24 chr15 19496137 19496324 -83998650 + Lx5 LINE L1 5727 5909 -1141 6 733 24 53 0 0 chr15 19496426 19496464 -83998510 + AT_rich Low_complexity Low_complexity 1 38 0 6 733 4990 131 18 4 chr15 19496670 19497447 -83997527 - Lx3C LINE L1 -11 6965 6178 6 733 14663 30 0 0 chr15 19497585 19500000 -83994974 - L1Md_T LINE L1 -1 6581 4166 6 733 22999 59 0 4 chr15 19500000 19503994 -83990980 - L1Md_Gf LINE L1 -1718 4168 94 1 733 39930 18 1 6 chr15 19504083 19510284 -83984690 - L1Md_A LINE L1 0 6582 416 2 733 201 26 100 25 chr15 19512890 19512930 -83982044 + T-rich Low_complexity Low_complexity 4 46 0 3 733 23 0 0 0 chr15 19513740 19513763 -83981211 + AT_rich Low_complexity Low_complexity 1 23 0 4 733 812 217 30 56 chr15 19514029 19514263 -83980711 + Lx6 LINE L1 889 1116 -5970 5 733 5035 116 28 7 chr15 19514263 19515077 -83979897 + RLTR22_Mur LTR ERVK 1 831 -1017 6 733 269 335 40 84 chr15 19515299 19515524 -83979450 + RMER12 LTR ERVK 1108 1322 0 7 733 11957 205 97 11 chr15 19515525 19518676 -83976298 + Lx6 LINE L1 1178 4599 -1278 5 733 711 90 0 0 chr15 19518682 19518782 -83976192 + (TTTC)n Simple_repeat Simple_repeat 1 100 0 8 733 4214 93 19 3 chr15 19518794 19519384 -83975590 - L1_Mus1 LINE L1 0 6567 5969 9 733 1444 67 0 0 chr15 19519384 19519578 -83975396 + L1_Mus1 LINE L1 5769 5962 -604 9 733 863 216 101 0 chr15 19519576 19519803 -83975171 + Lx6 LINE L1 4595 4844 -1033 5 733 1311 99 0 11 chr15 19519805 19519988 -83974986 + B2_Mm2 SINE B2 1 181 -14 1 733 11396 54 0 1 chr15 19519997 19521428 -83973546 + L1Md_F3 LINE L1 4157 5586 -297 1 733 7493 63 15 1 chr15 19521428 19522412 -83972562 + L1Md_F3 LINE L1 5587 6584 0 1 733 1706 237 7 5 chr15 19522412 19522828 -83972146 + Lx6 LINE L1 4834 5250 -627 5 733 1823 257 37 24 chr15 19522825 19523335 -83971639 + Lx5 LINE L1 6531 7047 -3 1 733 744 12 0 0 chr15 19524847 19524932 -83970042 + (TG)n Simple_repeat Simple_repeat 2 86 0 1 733 452 397 11 0 chr15 19524942 19525121 -83969853 - B3A SINE B2 -16 182 2 1 733 391 326 92 11 chr15 19526509 19526866 -83968108 + L1MA10 LINE L1 5938 6323 -11 1 733 22 0 0 0 chr15 19526933 19526955 -83968019 + AT_rich Low_complexity Low_complexity 1 22 0 1 733 2970 250 71 95 chr15 19527167 19527336 -83967638 + Lx6 LINE L1 5757 5936 -1524 5 733 1452 207 205 144 chr15 19527336 19527912 -83967062 + RMER19C LTR ERVK 1 611 0 1 733 2970 250 71 95 chr15 19527912 19528865 -83966109 + Lx6 LINE L1 5937 6852 -608 5 733 21 71 0 0 chr15 19529009 19529051 -83965923 + AT_rich Low_complexity Low_complexity 1 42 0 1 91 4913 133 15 25 chr15 19529061 19529864 -83965110 - Lx3A LINE L1 -10 6971 6177 1 734 246 186 17 17 chr15 19530121 19530149 -83964825 + (TTGG)n Simple_repeat Simple_repeat 3 31 0 2 734 207 0 0 0 chr15 19530149 19530172 -83964802 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 734 246 186 17 17 chr15 19530172 19530203 -83964771 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 2 734 468 326 28 128 chr15 19530248 19530382 -83964592 - Lx7 LINE L1 -542 7154 7035 2 734 279 0 0 0 chr15 19530382 19530413 -83964561 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 734 468 326 28 128 chr15 19530413 19530700 -83964274 - Lx7 LINE L1 -662 7034 6775 2 734 304 287 57 25 chr15 19531380 19531618 -83963356 - L1ME2 LINE L1 -269 5893 5645 2 734 29 78 0 0 chr15 19532084 19532148 -83962826 + AT_rich Low_complexity Low_complexity 1 64 0 2 734 3307 264 105 13 chr15 19532249 19533341 -83961633 - Lx5 LINE L1 -15 7035 5829 2 734 8410 100 19 5 chr15 19533354 19535267 -83959707 - L1_Mus1 LINE L1 -1 6566 4631 2 734 11905 96 4 1 chr15 19535298 19537037 -83957937 + L1_Mm LINE L1 1952 3695 -2188 2 734 1441 165 24 0 chr15 19537051 19537305 -83957669 - Lx5 LINE L1 -152 5725 5466 2 734 312 27 0 0 chr15 19538193 19538230 -83956744 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 734 591 15 0 0 chr15 19538230 19538297 -83956677 + (GA)n Simple_repeat Simple_repeat 2 69 0 3 734 434 349 112 34 chr15 19538440 19538763 -83956211 + MTE2a LTR MaLR 1 348 -31 3 734 403 292 24 14 chr15 19538771 19539014 -83955960 + L1P5 LINE L1 5308 5554 -743 3 734 4372 12 0 0 chr15 19539101 19539598 -83955376 - L1Md_T LINE L1 -266 5617 5121 3 734 8241 29 0 1 chr15 19539598 19540568 -83954406 + L1Md_T LINE L1 5613 6581 -1 3 734 393 322 59 70 chr15 19540573 19540860 -83954114 + Lx8 LINE L1 5643 5926 -1547 3 734 2789 71 5 3 chr15 19540959 19541326 -83953648 + L1_Mus1 LINE L1 6200 6567 0 3 734 390 21 0 0 chr15 19541423 19541470 -83953504 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 734 814 329 59 84 chr15 19541545 19542306 -83952668 + Lx8 LINE L1 6287 7028 -445 3 734 994 273 56 7 chr15 19542346 19542615 -83952359 - Lx6 LINE L1 -10 7450 7169 3 734 23 0 0 0 chr15 19542617 19542640 -83952334 + AT_rich Low_complexity Low_complexity 1 23 0 3 734 429 20 0 0 chr15 19543617 19543667 -83951307 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 734 239 376 27 41 chr15 19543709 19543856 -83951118 + B3A SINE B2 1 145 -53 4 734 348 24 0 0 chr15 19543878 19543919 -83951055 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 734 385 315 68 7 chr15 19545368 19545515 -83949459 + B4A SINE B4 52 207 -85 4 734 21 36 0 0 chr15 19546341 19546369 -83948605 + AT_rich Low_complexity Low_complexity 1 28 0 4 734 1729 136 84 16 chr15 19548491 19548813 -83946161 + Lx3A LINE L1 6630 6973 -8 4 734 238 254 18 0 chr15 19548857 19548912 -83946062 - B3A SINE B2 -142 56 1 4 734 2660 104 36 0 chr15 19551107 19551492 -83943482 + MTB LTR MaLR 2 400 0 4 734 1789 156 115 24 chr15 19551810 19552383 -83942591 - RLTR1B LTR ERV1 0 624 1 4 734 2133 113 26 112 chr15 19552666 19553096 -83941878 - RLTR9C LTR ERVK 0 393 1 4 734 782 201 111 4 chr15 19553577 19553812 -83941162 + Lx9 LINE L1 7385 7644 0 5 734 342 232 9 27 chr15 19554012 19554138 -83940836 - L1_Mus1 LINE L1 -718 5849 5690 5 734 33 0 0 0 chr15 19554549 19554582 -83940392 + AT_rich Low_complexity Low_complexity 1 33 0 5 734 350 342 38 7 chr15 19554840 19555106 -83939868 + L1M2 LINE L1 5500 5778 -390 5 734 702 342 104 4 chr15 19555311 19555581 -83939393 - MTD LTR MaLR -14 405 109 5 734 222 273 0 0 chr15 19555751 19555795 -83939179 - RSINE1 SINE B4 -120 45 2 5 734 35596 35 11 7 chr15 19555824 19561015 -83933959 + L1Md_A LINE L1 383 5586 -297 5 734 8127 43 2 0 chr15 19561015 19562007 -83932967 + L1Md_A LINE L1 5587 6580 -2 5 734 1780 249 138 14 chr15 19562067 19562580 -83932394 + RMER19C LTR ERVK 35 611 0 5 734 930 311 106 92 chr15 19562580 19563144 -83931830 - MTC-int LTR MaLR -456 1336 430 5 734 340 0 0 0 chr15 19563144 19563182 -83931792 - L1Md_F3 LINE L1 -560 6024 5987 5 734 1642 52 5 0 chr15 19563183 19563393 -83931581 + L1_Mm LINE L1 2539 2749 -3134 6 734 181 71 36 0 chr15 19563566 19563594 -83931380 - L3 LINE CR1 -578 3911 3883 6 734 188 274 34 56 chr15 19564108 19564197 -83930777 + L3 LINE CR1 3551 3637 -852 6 734 2450 146 24 5 chr15 19564226 19564639 -83930335 - BGLII LTR ERVK 0 421 1 6 734 201 361 0 0 chr15 19565632 19565704 -83929270 + (TATG)n Simple_repeat Simple_repeat 4 75 0 6 734 326 289 0 0 chr15 19565783 19565859 -83929115 - MTD LTR MaLR 0 419 344 6 734 400 230 147 33 chr15 19565869 19566000 -83928974 + RMER17C LTR ERVK 65 219 -191 6 734 582 15 0 0 chr15 19566000 19566067 -83928907 + (TC)n Simple_repeat Simple_repeat 2 68 0 6 734 400 230 147 33 chr15 19566067 19566119 -83928855 + RMER17C LTR ERVK 220 269 -141 6 734 371 21 21 0 chr15 19566119 19566167 -83928807 + (GGA)n Simple_repeat Simple_repeat 3 51 0 6 734 594 259 28 28 chr15 19566167 19566310 -83928664 - MTD LTR MaLR -108 311 169 6 734 396 132 0 0 chr15 19566366 19566449 -83928525 + (GA)n Simple_repeat Simple_repeat 2 84 0 6 734 3293 57 0 5 chr15 19566600 19567021 -83927953 + L1Md_F2 LINE L1 5168 5586 -297 7 734 8110 47 1 0 chr15 19567021 19568016 -83926958 + L1Md_F2 LINE L1 5587 6582 0 7 734 36 23 0 0 chr15 19568908 19568951 -83926023 + AT_rich Low_complexity Low_complexity 1 43 0 7 734 31803 78 4 3 chr15 19569323 19574535 -83920439 + L1Md_F2 LINE L1 279 5589 -297 7 734 7502 59 19 0 chr15 19574535 19575511 -83919463 + L1Md_F2 LINE L1 5590 6584 -1 7 734 33 66 0 0 chr15 19575548 19575609 -83919365 + AT_rich Low_complexity Low_complexity 1 61 0 7 734 186 43 0 0 chr15 19575669 19575692 -83919282 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 7 734 569 165 29 29 chr15 19576276 19576413 -83918561 - Lx2B LINE L1 -1 6999 6863 7 734 303 147 66 50 chr15 19576413 19576501 -83918473 - ORR1D-int LTR MaLR 0 1370 1298 7 734 2634 101 39 3 chr15 19576661 19577047 -83917927 - MTB LTR MaLR 0 400 1 7 734 2587 138 5 22 chr15 19577047 19577492 -83917482 - MTB-int LTR MaLR 0 1098 662 7 734 366 227 23 0 chr15 19577495 19577583 -83917391 - RLTR10A LTR ERVK 0 411 322 7 734 362 183 25 108 chr15 19577599 19577723 -83917251 - RLTR10A LTR ERVK -170 241 114 7 734 1808 232 41 34 chr15 19577751 19578534 -83916440 - RLTR45-int LTR ERVK -202 7042 6522 7 734 703 304 16 5 chr15 19578579 19578959 -83916015 - RLTR45-int LTR ERVK -3527 4054 3511 7 734 388 191 61 41 chr15 19579411 19579509 -83915465 - RLTR10-int LTR ERVK -1569 418 319 7 734 232 240 53 115 chr15 19579525 19579638 -83915336 - RLTR27 LTR ERVK 0 309 204 8 734 451 221 25 16 chr15 19579647 19579772 -83915202 - RLTR10A LTR ERVK -166 245 104 7 734 3860 136 34 13 chr15 19579817 19580504 -83914470 - MTB-int LTR MaLR -397 701 1 8 734 2893 86 5 2 chr15 19580506 19580903 -83914071 - MTB LTR MaLR -2 398 1 8 734 202 288 25 12 chr15 19580907 19580988 -83913986 + CT-rich Low_complexity Low_complexity 1 82 0 8 734 889 309 74 9 chr15 19581119 19581407 -83913567 + L1_Mur3 LINE L1 2588 2876 -3004 8 734 432 0 0 0 chr15 19581407 19581455 -83913519 + (TA)n Simple_repeat Simple_repeat 1 48 0 8 734 889 309 74 9 chr15 19581455 19581600 -83913374 + L1_Mur3 LINE L1 2877 3048 -2832 8 734 1190 252 48 21 chr15 19581586 19582004 -83912970 + L1_Mur3 LINE L1 4420 4848 -1032 8 734 1317 322 43 29 chr15 19582132 19582689 -83912285 + Lx7 LINE L1 6419 6983 -713 8 734 342 288 66 14 chr15 19584208 19584382 -83910592 - L1_Mur3 LINE L1 -2019 3861 3681 8 734 526 335 32 16 chr15 19584439 19584624 -83910350 - B3 SINE B2 -14 202 15 8 734 409 361 55 17 chr15 19584641 19584985 -83909989 - L1M2 LINE L1 -2459 3684 3328 8 734 294 29 0 0 chr15 19585671 19585706 -83909268 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 8 734 182 273 45 0 chr15 19585822 19585866 -83909108 - L2a LINE L2 -23 3403 3358 9 734 455 267 103 83 chr15 19586348 19586552 -83908422 + B3 SINE B2 1 208 -8 9 734 22 56 0 0 chr15 19586797 19586833 -83908141 + AT_rich Low_complexity Low_complexity 1 36 0 9 734 309 89 0 0 chr15 19587364 19587409 -83907565 + (A)n Simple_repeat Simple_repeat 1 45 0 9 734 283 333 35 17 chr15 19587797 19587913 -83907061 - Lx8 LINE L1 -251 7222 7105 9 734 434 252 17 44 chr15 19588250 19588479 -83906495 - L1_Rod LINE L1 -804 5496 5258 9 734 21 36 0 0 chr15 19589104 19589132 -83905842 + AT_rich Low_complexity Low_complexity 1 28 0 9 734 328 262 29 0 chr15 19589132 19589235 -83905739 + L1_Mm LINE L1 5441 5546 -337 9 734 1372 222 17 0 chr15 19589236 19589529 -83905445 + Lx6 LINE L1 5460 5757 -120 9 734 1699 157 48 16 chr15 19589529 19589840 -83905134 + Lx3C LINE L1 6643 6963 -13 9 734 9014 103 26 15 chr15 19589840 19591761 -83903213 + Lx3_Mus LINE L1 5066 7009 0 1 734 25 31 0 0 chr15 19591769 19591801 -83903173 + AT_rich Low_complexity Low_complexity 1 32 0 1 734 993 88 29 0 chr15 19591807 19591943 -83903031 + B1_Mus1 SINE Alu 2 141 -7 1 734 468 51 0 0 chr15 19591948 19592007 -83902967 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 1 734 270 0 0 0 chr15 19592010 19592040 -83902934 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 1 734 1565 313 112 20 chr15 19592041 19593103 -83901871 + Lx6 LINE L1 5886 7269 -191 9 734 342 128 0 114 chr15 19594543 19594622 -83900352 - RMER6C LTR ERVK -2 688 619 1 734 390 102 0 0 chr15 19594622 19594681 -83900293 + RMER6D LTR ERVK 1 59 -661 1 734 621 0 0 0 chr15 19594683 19594752 -83900222 + (TC)n Simple_repeat Simple_repeat 2 70 0 1 734 319 220 40 97 chr15 19594768 19594944 -83900030 - Lx2B LINE L1 -21 6979 6814 1 734 369 198 40 99 chr15 19594944 19595045 -83899929 + RMER6C LTR ERVK 43 137 -553 1 734 465 66 0 0 chr15 19595102 19595163 -83899811 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 1 734 1823 216 52 14 chr15 19595163 19595595 -83899379 - Lx3C LINE L1 -15 6961 6511 1 734 262 86 207 0 chr15 19595595 19595653 -83899321 + RMER6C LTR ERVK 168 237 -453 1 734 485 281 125 58 chr15 19595655 19595999 -83898975 - RLTR9A LTR ERVK -1 367 1 1 734 973 204 88 69 chr15 19595999 19596339 -83898635 + RMER6C LTR ERVK 235 690 0 1 734 1082 128 0 11 chr15 19596680 19596862 -83898112 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 734 410 94 0 15 chr15 19597604 19597669 -83897305 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 734 473 49 24 24 chr15 19597669 19597752 -83897222 + (GA)n Simple_repeat Simple_repeat 2 84 0 1 734 24 67 0 0 chr15 19598156 19598201 -83896773 + AT_rich Low_complexity Low_complexity 1 45 0 1 734 23 0 0 0 chr15 19598421 19598444 -83896530 + AT_rich Low_complexity Low_complexity 1 23 0 1 734 639 0 0 0 chr15 19598928 19598999 -83895975 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 734 1051 113 0 0 chr15 19599003 19599145 -83895829 - B1_Mus1 SINE Alu -6 142 1 1 734 1506 277 5 16 chr15 19599601 19599972 -83895002 + Lx9 LINE L1 6321 6687 -957 1 734 212 321 37 12 chr15 19600107 19600189 -83894785 + PB1D10 SINE Alu 23 106 -11 1 734 1042 96 7 0 chr15 19600612 19600758 -83894216 + B1_Mus2 SINE Alu 1 147 0 1 734 222 148 0 0 chr15 19600787 19600841 -83894133 + (T)n Simple_repeat Simple_repeat 1 54 0 1 734 34 24 0 0 chr15 19601271 19601312 -83893662 + AT_rich Low_complexity Low_complexity 1 41 0 1 734 399 106 0 0 chr15 19601405 19601471 -83893503 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 734 885 335 62 83 chr15 19601858 19602931 -83892043 + Lx8 LINE L1 6353 7402 -71 1 734 762 142 6 50 chr15 19602986 19603145 -83891829 + L1_Mm LINE L1 5469 5614 -628 1 734 7422 85 1 4 chr15 19603145 19604140 -83890834 + L1Md_F2 LINE L1 5587 6578 -4 1 734 2583 220 36 20 chr15 19605216 19605829 -83889145 - Lx3C LINE L1 -2 6974 6352 1 734 972 206 58 8 chr15 19605820 19606060 -83888914 - Lx3C LINE L1 -770 6206 5955 1 734 789 57 8 16 chr15 19606062 19606188 -83888786 + (TA)n Simple_repeat Simple_repeat 1 125 0 1 734 538 312 175 21 chr15 19606698 19607373 -83887601 + Tigger1 DNA MER2_type 1550 2328 -90 1 734 226 158 0 0 chr15 19607395 19607433 -83887541 - U2 snRNA snRNA -150 38 1 1 734 517 302 49 12 chr15 19607597 19607761 -83887213 - Tigger1 DNA MER2_type -1429 989 820 1 734 33007 10 0 1 chr15 19607762 19614588 -83880386 + L1Md_A LINE L1 1 5586 -297 1 734 9060 3 0 0 chr15 19614588 19615584 -83879390 + L1Md_A LINE L1 5587 6582 0 1 734 712 328 56 54 chr15 19615584 19616012 -83878962 - Tigger1 DNA MER2_type -1584 834 406 1 734 640 64 64 0 chr15 19616072 19616182 -83878792 + L1Md_F3 LINE L1 6467 6583 -1 1 734 1097 90 0 0 chr15 19617809 19617954 -83877020 + B1_Mus2 SINE Alu 3 147 0 1 734 776 332 16 30 chr15 19618990 19619362 -83875612 + Lx8 LINE L1 6614 6980 -493 1 734 215 240 20 0 chr15 19619397 19619447 -83875527 + (TATG)n Simple_repeat Simple_repeat 4 54 0 1 734 23 33 0 0 chr15 19620739 19620769 -83874205 + AT_rich Low_complexity Low_complexity 1 30 0 1 734 1035 49 0 14 chr15 19620966 19621111 -83873863 - L1Md_F3 LINE L1 -3 6581 6439 1 734 727 324 12 15 chr15 19622009 19622338 -83872636 - Lx9 LINE L1 -656 6988 6661 1 734 309 185 0 0 chr15 19622592 19622657 -83872317 + (CATATA)n Simple_repeat Simple_repeat 4 68 0 1 734 198 191 0 0 chr15 19622660 19622702 -83872272 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 734 1647 145 165 6 chr15 19623970 19624309 -83870665 + Lx LINE L1 6255 6647 -7 1 734 312 91 0 0 chr15 19624551 19624595 -83870379 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 734 501 84 0 0 chr15 19624595 19624666 -83870308 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 734 282 269 0 0 chr15 19626090 19626157 -83868817 + Lx8 LINE L1 6602 6668 -805 1 734 262 370 21 5 chr15 19626252 19626445 -83868529 + Lx8 LINE L1 6827 7022 -451 1 734 248 250 0 0 chr15 19626563 19626615 -83868359 + Lx8 LINE L1 7175 7226 -247 1 734 605 215 88 18 chr15 19626749 19626976 -83867998 - Lx9 LINE L1 0 7644 7402 1 734 1629 191 0 10 chr15 19627364 19627671 -83867303 + L1VL2 LINE L1 28 331 -6004 1 734 5346 137 34 33 chr15 19627676 19628727 -83866247 + MusHAL1 LINE L1 1030 2081 -631 1 734 1761 236 7 16 chr15 19628811 19629241 -83865733 + Lx2B LINE L1 6461 6886 -114 1 734 1006 366 77 18 chr15 19629886 19630771 -83864203 - Lx8 LINE L1 -233 7240 6304 1 734 325 125 21 0 chr15 19630968 19631016 -83863958 + HAL1-3A_ME LINE L1 1976 2024 -834 1 734 688 256 66 21 chr15 19631472 19631715 -83863259 + Lx5 LINE L1 6794 7047 -3 1 734 26 0 0 0 chr15 19631881 19631907 -83863067 + AT_rich Low_complexity Low_complexity 1 26 0 1 734 186 103 0 0 chr15 19632231 19632260 -83862714 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 1 734 420 345 21 58 chr15 19633321 19633509 -83861465 - B3A SINE B2 -12 186 6 1 734 500 0 17 0 chr15 19633802 19633862 -83861112 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 734 25 75 0 0 chr15 19634105 19634158 -83860816 + AT_rich Low_complexity Low_complexity 1 53 0 1 734 189 0 0 0 chr15 19634218 19634239 -83860735 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 1 734 510 284 131 0 chr15 19634525 19634701 -83860273 - Lx5 LINE L1 -703 6347 6149 1 734 394 183 21 21 chr15 19634736 19634831 -83860143 + Lx6 LINE L1 5792 5886 -1574 1 734 288 250 0 0 chr15 19634825 19634913 -83860061 + Lx5 LINE L1 5991 6078 -972 1 734 1890 276 53 32 chr15 19635372 19635993 -83858981 + Lx6 LINE L1 6817 7450 -10 1 734 5662 80 0 28 chr15 19636056 19636839 -83858135 - L1_Mus2 LINE L1 0 6566 5806 1 734 21 0 0 0 chr15 19636851 19636872 -83858102 + AT_rich Low_complexity Low_complexity 1 21 0 1 734 298 0 23 23 chr15 19637238 19637281 -83857693 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 734 1105 79 0 0 chr15 19637281 19637420 -83857554 - B1_Mus2 SINE Alu -8 139 1 1 734 245 389 32 80 chr15 19637931 19638180 -83856794 + B4A SINE B4 10 246 -46 1 734 295 206 16 69 chr15 19638217 19638405 -83856569 + GA-rich Low_complexity Low_complexity 3 180 0 1 734 269 312 0 36 chr15 19638408 19638491 -83856483 + G-rich Low_complexity Low_complexity 2 81 0 1 734 346 188 7 53 chr15 19638506 19638658 -83856316 + GA-rich Low_complexity Low_complexity 1 145 0 1 734 272 182 0 43 chr15 19638686 19638778 -83856196 + GA-rich Low_complexity Low_complexity 3 90 0 1 734 366 200 28 61 chr15 19638827 19639008 -83855966 + GA-rich Low_complexity Low_complexity 4 178 0 1 734 334 296 80 62 chr15 19639020 19639182 -83855792 + HAL1-3A_ME LINE L1 2284 2448 -410 1 734 520 239 13 42 chr15 19639183 19639722 -83855252 + GA-rich Low_complexity Low_complexity 1 523 0 1 734 305 329 26 58 chr15 19639726 19639881 -83855093 + HAL1-3A_ME LINE L1 2292 2441 -417 1 734 303 320 29 0 chr15 19639881 19639984 -83854990 + GA-rich Low_complexity Low_complexity 3 108 0 1 734 352 219 11 58 chr15 19639995 19640184 -83854790 + GA-rich Low_complexity Low_complexity 1 180 0 1 734 343 273 86 59 chr15 19640205 19640357 -83854617 + HAL1-3A_ME LINE L1 2284 2439 -419 1 734 384 247 14 33 chr15 19640359 19640877 -83854097 + GA-rich Low_complexity Low_complexity 1 507 0 1 734 503 249 16 45 chr15 19640916 19641626 -83853348 + GA-rich Low_complexity Low_complexity 1 689 0 1 734 350 234 14 34 chr15 19641649 19641964 -83853010 + GA-rich Low_complexity Low_complexity 1 308 0 1 734 304 345 53 26 chr15 19642036 19642188 -83852786 + HAL1-3A_ME LINE L1 2284 2439 -419 1 734 322 273 76 89 chr15 19642163 19642320 -83852654 + HAL1-3A_ME LINE L1 2285 2439 -419 1 734 353 290 0 32 chr15 19642323 19642605 -83852369 + GA-rich Low_complexity Low_complexity 1 272 0 1 734 359 313 17 9 chr15 19642607 19642723 -83852251 + G-rich Low_complexity Low_complexity 4 120 0 1 734 239 246 20 34 chr15 19642730 19642877 -83852097 + GA-rich Low_complexity Low_complexity 4 148 0 1 734 339 302 71 59 chr15 19642887 19643116 -83851858 + HAL1-3A_ME LINE L1 2282 2448 -410 1 734 327 248 4 47 chr15 19643166 19643426 -83851548 + GA-rich Low_complexity Low_complexity 1 248 0 1 734 343 295 48 54 chr15 19643427 19643574 -83851400 + HAL1-3A_ME LINE L1 2293 2438 -420 1 734 205 243 0 0 chr15 19643590 19643627 -83851347 + G-rich Low_complexity Low_complexity 3 39 0 1 734 313 291 100 60 chr15 19643628 19643778 -83851196 + HAL1-3A_ME LINE L1 2284 2439 -419 1 734 302 307 6 0 chr15 19643829 19644005 -83850969 + GA-rich Low_complexity Low_complexity 1 177 0 1 734 322 284 188 45 chr15 19644036 19644169 -83850805 + HAL1-3A_ME LINE L1 2285 2436 -422 1 734 403 331 6 34 chr15 19644169 19644408 -83850566 + GA-rich Low_complexity Low_complexity 1 232 0 1 734 257 231 0 62 chr15 19644409 19644538 -83850436 + G-rich Low_complexity Low_complexity 1 121 0 1 734 316 254 16 9 chr15 19644585 19644921 -83850053 + GA-rich Low_complexity Low_complexity 1 338 0 1 734 318 252 107 67 chr15 19644976 19645125 -83849849 + HAL1-3A_ME LINE L1 2285 2439 -419 1 734 335 296 79 47 chr15 19645102 19645287 -83849687 + HAL1-3A_ME LINE L1 2285 2440 -418 1 734 221 259 35 0 chr15 19645287 19645345 -83849629 + G-rich Low_complexity Low_complexity 6 65 0 1 734 320 327 52 45 chr15 19645351 19645505 -83849469 + HAL1-3A_ME LINE L1 2285 2439 -419 1 734 212 276 0 9 chr15 19645541 19645647 -83849327 + GA-rich Low_complexity Low_complexity 1 105 0 1 734 435 257 19 31 chr15 19645665 19646475 -83848499 + GA-rich Low_complexity Low_complexity 1 800 0 1 734 236 274 6 44 chr15 19646500 19646683 -83848291 + GA-rich Low_complexity Low_complexity 3 178 0 1 734 318 256 17 28 chr15 19646734 19647025 -83847949 + GA-rich Low_complexity Low_complexity 1 288 0 1 734 311 274 147 41 chr15 19647025 19647239 -83847735 + HAL1-3A_ME LINE L1 2284 2440 -418 1 734 403 273 18 0 chr15 19647269 19647611 -83847363 + GA-rich Low_complexity Low_complexity 1 348 0 1 734 313 295 105 28 chr15 19647642 19647785 -83847189 + HAL1-3A_ME LINE L1 2285 2438 -420 1 734 315 315 0 0 chr15 19647785 19647874 -83847100 + GA-rich Low_complexity Low_complexity 4 92 0 2 734 227 122 0 58 chr15 19647882 19647906 -83847068 + polypurine Low_complexity Low_complexity 3 25 0 2 734 1206 102 0 0 chr15 19647906 19648082 -83846892 + (GGA)n Simple_repeat Simple_repeat 3 178 0 2 734 1541 6 3 8 chr15 19648082 19648443 -83846531 + (GAA)n Simple_repeat Simple_repeat 1 359 0 2 734 227 122 0 58 chr15 19648443 19648467 -83846507 + polypurine Low_complexity Low_complexity 26 49 0 2 734 387 73 0 0 chr15 19650914 19650969 -83844005 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 734 216 224 17 0 chr15 19650989 19651047 -83843927 + (TAA)n Simple_repeat Simple_repeat 3 61 0 2 734 1894 169 27 3 chr15 19651130 19651468 -83843506 + ORR1A1 LTR MaLR 1 346 0 2 734 24 0 0 0 chr15 19652628 19652652 -83842322 + AT_rich Low_complexity Low_complexity 1 24 0 2 734 506 86 12 0 chr15 19652773 19652854 -83842120 + (TA)n Simple_repeat Simple_repeat 1 82 0 2 734 210 118 0 0 chr15 19653135 19653169 -83841805 + (GA)n Simple_repeat Simple_repeat 2 35 0 2 734 475 273 0 25 chr15 19653461 19653619 -83841355 - Lx5 LINE L1 -3 7047 6894 2 734 23 0 0 0 chr15 19654046 19654069 -83840905 + AT_rich Low_complexity Low_complexity 1 23 0 2 734 4865 177 11 7 chr15 19654852 19655850 -83839124 + L1_Mur2 LINE L1 4323 5324 -553 2 91 30269 84 7 7 chr15 19655839 19660821 -83834153 + L1Md_F2 LINE L1 612 5586 -297 2 735 7542 75 2 3 chr15 19660821 19661814 -83833160 + L1Md_F2 LINE L1 5587 6578 -4 2 735 6402 138 17 1 chr15 19661817 19663144 -83831830 + Lx LINE L1 5309 6654 0 2 735 481 365 61 5 chr15 19663151 19663349 -83831625 + B3A SINE B2 7 215 -1 2 735 449 280 6 103 chr15 19663904 19664079 -83830895 + MT2B LTR ERVL 119 276 -325 2 735 1013 81 0 14 chr15 19663969 19664098 -83830876 + B1_Mm SINE Alu 11 139 -8 2 735 183 42 0 0 chr15 19664098 19664122 -83830852 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 2 735 194 105 26 0 chr15 19664694 19664732 -83830242 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 2 735 21 0 0 0 chr15 19665919 19665940 -83829034 + AT_rich Low_complexity Low_complexity 1 21 0 2 735 29 28 0 0 chr15 19666267 19666303 -83828671 + AT_rich Low_complexity Low_complexity 1 36 0 2 735 26 82 0 0 chr15 19666393 19666454 -83828520 + AT_rich Low_complexity Low_complexity 1 61 0 2 735 9240 104 45 6 chr15 19666495 19668142 -83826832 - Lx3_Mus LINE L1 -12 6997 5284 2 735 273 29 0 0 chr15 19668142 19668176 -83826798 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2 735 3702 103 80 2 chr15 19668176 19668187 -83826787 - Lx3_Mus LINE L1 -603 5283 5271 2 735 37624 45 1 3 chr15 19668178 19674375 -83820599 - L1Md_T LINE L1 -1 6584 305 2 735 1172 103 10 5 chr15 19674385 19674590 -83820384 - Lx3_Mus LINE L1 -590 5296 5091 2 735 7202 120 101 19 chr15 19674584 19675901 -83819073 + L1_Mm LINE L1 4338 5762 -121 2 735 3437 53 0 0 chr15 19675898 19676328 -83818646 + L1Md_T LINE L1 5908 6337 -245 2 735 3178 108 6 4 chr15 19676313 19676788 -83818186 + L1_Mur1 LINE L1 4655 5130 -756 2 735 28 48 0 0 chr15 19676990 19677032 -83817942 + AT_rich Low_complexity Low_complexity 1 42 0 2 735 543 280 48 5 chr15 19677041 19677249 -83817725 + Lx3C LINE L1 6674 6890 -86 2 735 27 29 0 0 chr15 19677249 19677283 -83817691 + AT_rich Low_complexity Low_complexity 1 34 0 2 735 981 115 58 0 chr15 19678893 19679049 -83815925 + MT2B2 LTR ERVL 338 502 -82 2 735 231 36 0 0 chr15 19681057 19681085 -83813889 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 735 7739 65 14 3 chr15 19681978 19683013 -83811961 + MTA_Mm-int LTR MaLR 53 1098 0 2 735 3149 56 2 8 chr15 19683013 19683411 -83811563 + MTA_Mm LTR MaLR 1 396 0 2 735 256 188 0 20 chr15 19684270 19684319 -83810655 - PB1D9 SINE Alu -51 69 22 2 735 307 292 244 24 chr15 19684466 19684589 -83810385 + RSINE1 SINE B4 8 157 -8 2 735 291 364 61 0 chr15 19684748 19684847 -83810127 + PB1D7 SINE Alu 1 105 -15 2 735 240 297 0 0 chr15 19684836 19684900 -83810074 + B4A SINE B4 56 119 -173 2 735 687 293 90 0 chr15 19684957 19685124 -83809850 + B3 SINE B2 3 184 -32 2 735 590 175 45 60 chr15 19685138 19685272 -83809702 + B1F2 SINE Alu 11 142 -7 2 735 626 109 100 8 chr15 19685487 19685600 -83809374 - URR1B DNA MER1_type 0 225 102 2 735 2571 107 146 18 chr15 19685600 19686046 -83808928 + MT2B2 LTR ERVL 1 503 -81 2 735 326 259 44 12 chr15 19687107 19687185 -83807789 + (TCTA)n Simple_repeat Simple_repeat 1 82 0 2 735 249 128 0 0 chr15 19687185 19687232 -83807742 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 735 326 259 44 12 chr15 19687232 19687313 -83807661 + (TCTA)n Simple_repeat Simple_repeat 2 84 0 2 735 400 336 36 23 chr15 19687812 19688031 -83806943 + ERVL-B4-int LTR ERVL 324 545 -5169 2 735 258 361 41 20 chr15 19688031 19688226 -83806748 + ERVL-B4-int LTR ERVL 766 964 -4793 2 735 553 168 242 8 chr15 19688267 19688399 -83806575 - L1_Mur2 LINE L1 -219 5658 5496 2 735 6040 169 32 17 chr15 19688400 19689546 -83805428 + Lx4A LINE L1 5893 7056 -2 2 735 21 0 0 0 chr15 19689546 19689567 -83805407 + AT_rich Low_complexity Low_complexity 1 21 0 2 735 2857 316 81 19 chr15 19689598 19691268 -83803706 + ERVL-B4-int LTR ERVL 985 2833 -2928 2 735 384 96 27 14 chr15 19691434 19691508 -83803466 - L1Md_A LINE L1 0 6582 6508 2 735 248 296 0 0 chr15 19691651 19691732 -83803242 + (CA)n Simple_repeat Simple_repeat 2 82 0 2 735 229 238 17 110 chr15 19691748 19691866 -83803108 - Lx7 LINE L1 -282 7414 7308 2 735 4275 78 1 0 chr15 19691864 19692630 -83802344 - L1Md_F2 LINE L1 -441 6141 5375 2 735 3409 95 35 12 chr15 19692631 19693141 -83801833 + L1Md_F2 LINE L1 6061 6582 0 2 735 2329 264 71 15 chr15 19693142 19693420 -83801554 - Lx7 LINE L1 -380 7316 7041 2 735 2838 84 2 27 chr15 19693420 19693826 -83801148 + MTA_Mm LTR MaLR 1 396 0 2 735 2329 264 71 15 chr15 19693826 19694209 -83800765 - Lx7 LINE L1 -656 7040 6618 2 735 225 320 64 0 chr15 19694596 19694674 -83800300 - Lx6 LINE L1 -846 6614 6532 2 735 1679 253 101 44 chr15 19694684 19694957 -83800017 - Lx7 LINE L1 -1397 6299 6026 2 735 1756 155 76 0 chr15 19694957 19695261 -83799713 + ORR1A2 LTR MaLR 1 327 0 2 735 2691 240 28 13 chr15 19695261 19696032 -83798942 - Lx7 LINE L1 -1671 6025 5211 2 735 282 316 36 14 chr15 19696265 19696403 -83798571 + ERVL-B4-int LTR ERVL 3157 3297 -2188 2 735 261 98 0 0 chr15 19696405 19696446 -83798528 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 735 21 36 0 0 chr15 19696580 19696608 -83798366 + AT_rich Low_complexity Low_complexity 1 28 0 2 735 223 225 0 0 chr15 19697652 19697692 -83797282 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 735 218 354 73 0 chr15 19697780 19697862 -83797112 + PB1D10 SINE Alu 28 115 -2 2 735 23 0 0 0 chr15 19698020 19698043 -83796931 + AT_rich Low_complexity Low_complexity 1 23 0 2 735 408 125 0 0 chr15 19698441 19698505 -83796469 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 735 194 255 77 19 chr15 19698896 19698948 -83796026 - L2c LINE L2 -221 3166 3112 2 735 309 256 14 132 chr15 19698959 19699103 -83795871 - L2c LINE L2 -5 3382 3256 2 735 378 100 22 22 chr15 19699614 19699706 -83795268 + (TTTG)n Simple_repeat Simple_repeat 1 92 0 2 735 1145 75 0 0 chr15 19699706 19699853 -83795121 - B1_Mus2 SINE Alu 0 147 1 2 735 3512 39 23 0 chr15 19699861 19700297 -83794677 - L1Md_F2 LINE L1 -1 6581 6136 2 735 456 349 112 47 chr15 19701393 19701733 -83793241 + MTEa LTR MaLR 18 379 0 2 735 233 29 0 29 chr15 19701898 19701933 -83793041 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2 735 1040 157 45 36 chr15 19701933 19702157 -83792817 - Lx LINE L1 -15 6639 6414 2 735 2277 126 0 29 chr15 19702156 19702533 -83792441 + L1_Mm LINE L1 3826 4191 -1692 2 735 756 33 0 0 chr15 19703047 19703138 -83791836 + (TTTC)n Simple_repeat Simple_repeat 4 94 0 2 735 894 49 115 0 chr15 19703142 19703264 -83791710 - B1_Mus2 SINE Alu -7 140 5 2 735 1238 53 0 0 chr15 19703293 19703445 -83791529 - L1_Mus3 LINE L1 -304 6334 6183 2 735 2123 87 13 3 chr15 19703445 19703745 -83791229 + L1_Mus3 LINE L1 6336 6638 0 2 735 29 60 0 0 chr15 19703754 19703804 -83791170 + AT_rich Low_complexity Low_complexity 1 50 0 2 735 885 194 0 0 chr15 19704046 19704226 -83790748 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 2 735 189 0 0 0 chr15 19705270 19705291 -83789683 + (CA)n Simple_repeat Simple_repeat 1 21 0 2 735 286 274 72 36 chr15 19706023 19706216 -83788758 - L1MC3 LINE L1 -1835 5950 5751 2 735 234 342 0 0 chr15 19706237 19706316 -83788658 + ID4 SINE ID 1 79 -4 2 735 441 54 0 0 chr15 19706574 19706630 -83788344 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 735 285 29 0 0 chr15 19706630 19706663 -83788311 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 735 2030 130 29 29 chr15 19707235 19707584 -83787390 - Lx LINE L1 -6 6648 6300 2 735 311 266 71 50 chr15 19708271 19708370 -83786604 - Lx7 LINE L1 -389 7307 7207 2 735 1558 214 48 31 chr15 19708456 19708809 -83786165 - ORR1B2 LTR MaLR -8 359 1 2 735 300 279 0 0 chr15 19708809 19708888 -83786086 - PB1D9 SINE Alu -30 90 12 2 735 27 0 0 0 chr15 19709105 19709132 -83785842 + AT_rich Low_complexity Low_complexity 1 27 0 2 735 569 291 56 20 chr15 19710112 19710364 -83784610 + L1M2 LINE L1 5340 5600 -712 2 735 22 35 0 0 chr15 19711000 19711029 -83783945 + AT_rich Low_complexity Low_complexity 1 29 0 2 735 22 0 0 0 chr15 19711196 19711218 -83783756 + AT_rich Low_complexity Low_complexity 1 22 0 2 735 279 343 10 19 chr15 19711606 19711710 -83783264 + B3 SINE B2 39 141 -75 2 735 378 108 0 0 chr15 19711742 19711807 -83783167 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 735 32 43 0 0 chr15 19712364 19712410 -83782564 + AT_rich Low_complexity Low_complexity 1 46 0 2 735 1090 127 12 12 chr15 19712683 19712851 -83782123 + RLTR9A LTR ERVK 129 296 -72 2 735 22 56 0 0 chr15 19712851 19712887 -83782087 + AT_rich Low_complexity Low_complexity 1 36 0 2 735 463 119 0 67 chr15 19713009 19713099 -83781875 + RMER12 LTR ERVK 1 84 -1238 2 735 686 117 0 9 chr15 19713174 19713286 -83781688 + (GGA)n Simple_repeat Simple_repeat 3 113 0 2 735 1859 151 11 46 chr15 19713289 19713301 -83781673 + RMER12 LTR ERVK 456 467 -855 2 735 956 75 0 7 chr15 19713301 19713436 -83781538 + (GAAA)n Simple_repeat Simple_repeat 4 137 0 2 735 1859 151 11 46 chr15 19713436 19713792 -83781182 + RMER12 LTR ERVK 468 810 -512 2 735 780 206 110 73 chr15 19713776 19714022 -83780952 + RMER12 LTR ERVK 945 1199 -123 2 735 7025 90 4 1 chr15 19715828 19717647 -83777327 + L1Md_F LINE L1 284 2109 -3774 2 735 27819 80 2 1 chr15 19717645 19722124 -83772850 - L1Md_F2 LINE L1 0 6582 2099 3 735 16757 86 5 9 chr15 19722125 19725382 -83769592 + L1Md_Gf LINE L1 288 3629 -2257 3 735 5112 144 29 34 chr15 19725393 19726335 -83768639 + Lx3B LINE L1 6034 6970 -3 3 735 29 0 0 0 chr15 19726906 19726935 -83768039 + AT_rich Low_complexity Low_complexity 1 29 0 3 735 231 188 0 0 chr15 19727334 19727382 -83767592 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 735 585 0 0 0 chr15 19728325 19728390 -83766584 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 735 3579 148 25 12 chr15 19728416 19729018 -83765956 - Lx3B LINE L1 -9 6964 6355 3 735 2966 83 2 2 chr15 19729025 19729422 -83765552 - MTB LTR MaLR -2 398 2 3 735 23 33 0 0 chr15 19729559 19729589 -83765385 + AT_rich Low_complexity Low_complexity 1 30 0 3 735 26 30 0 0 chr15 19730129 19730162 -83764812 + AT_rich Low_complexity Low_complexity 1 33 0 3 735 201 147 0 0 chr15 19730436 19730470 -83764504 + (CATATA)n Simple_repeat Simple_repeat 1 34 0 3 735 1032 156 0 0 chr15 19730470 19730650 -83764324 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 735 927 151 0 0 chr15 19730675 19730834 -83764140 + (CA)n Simple_repeat Simple_repeat 2 160 0 3 735 876 176 0 0 chr15 19730855 19731020 -83763954 + (CA)n Simple_repeat Simple_repeat 2 166 0 3 735 219 167 0 0 chr15 19731032 19731074 -83763900 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 735 22 35 0 0 chr15 19731347 19731376 -83763598 + AT_rich Low_complexity Low_complexity 1 29 0 3 735 23 68 0 0 chr15 19731687 19731731 -83763243 + AT_rich Low_complexity Low_complexity 1 44 0 3 735 22 0 0 0 chr15 19731865 19731887 -83763087 + AT_rich Low_complexity Low_complexity 1 22 0 3 735 243 152 0 0 chr15 19732031 19732077 -83762897 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 735 594 128 0 0 chr15 19732077 19732171 -83762803 + (TA)n Simple_repeat Simple_repeat 1 94 0 3 735 241 82 20 20 chr15 19732388 19732438 -83762536 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 735 487 217 41 27 chr15 19732439 19732586 -83762388 + Lx7 LINE L1 7520 7668 -28 3 735 596 149 14 14 chr15 19732586 19732729 -83762245 + (TA)n Simple_repeat Simple_repeat 1 143 0 3 735 22 35 0 0 chr15 19733283 19733312 -83761662 + AT_rich Low_complexity Low_complexity 1 29 0 3 735 283 209 43 0 chr15 19733390 19733505 -83761469 + (TA)n Simple_repeat Simple_repeat 2 121 0 3 735 282 87 0 0 chr15 19734312 19734358 -83760616 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 735 21 36 0 0 chr15 19734509 19734537 -83760437 + AT_rich Low_complexity Low_complexity 1 28 0 3 735 278 326 20 20 chr15 19735600 19735747 -83759227 - RMER17C LTR ERVK -127 283 137 3 735 24 32 0 0 chr15 19735850 19735881 -83759093 + AT_rich Low_complexity Low_complexity 1 31 0 3 735 21 36 0 0 chr15 19736802 19736830 -83758144 + AT_rich Low_complexity Low_complexity 1 28 0 3 735 327 291 0 0 chr15 19736836 19736915 -83758059 - L1MC4 LINE L1 -1014 7028 6950 3 735 543 333 60 47 chr15 19736925 19737505 -83757469 + Charlie9 DNA MER1_type 1800 2387 -370 3 735 406 294 12 41 chr15 19737608 19737778 -83757196 - Lx6 LINE L1 -30 7430 7266 3 735 596 99 0 0 chr15 19737778 19737859 -83757115 + L1Md_F3 LINE L1 5506 5586 -297 3 735 7940 49 1 5 chr15 19737859 19738861 -83756113 + L1Md_F3 LINE L1 5587 6584 0 3 735 651 277 124 12 chr15 19738863 19739104 -83755870 - Lx6 LINE L1 -186 7274 7007 3 735 278 223 44 18 chr15 19739105 19739219 -83755755 + (TTTA)n Simple_repeat Simple_repeat 1 117 0 3 735 238 171 0 0 chr15 19739273 19739308 -83755666 + Lx3C LINE L1 6785 6819 -157 3 735 969 139 0 0 chr15 19739937 19740081 -83754893 - B1_Mus1 SINE Alu -1 147 4 3 735 22 56 0 0 chr15 19740147 19740183 -83754791 + AT_rich Low_complexity Low_complexity 1 36 0 3 735 1957 202 22 3 chr15 19740275 19740723 -83754251 - Lx5 LINE L1 -1056 5994 5563 3 735 33 0 0 0 chr15 19740906 19740939 -83754035 + AT_rich Low_complexity Low_complexity 1 33 0 3 735 2506 232 40 20 chr15 19740946 19741589 -83753385 + Lx2B LINE L1 6318 6973 -27 3 735 1529 300 21 9 chr15 19741605 19742036 -83752938 - Lx6 LINE L1 -59 7401 6966 3 735 335 248 28 0 chr15 19742265 19742374 -83752600 - L1_Mur3 LINE L1 -2406 3474 3363 3 735 201 147 0 0 chr15 19743147 19743181 -83751793 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 735 288 154 0 0 chr15 19744635 19744687 -83750287 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 735 22 70 0 0 chr15 19744777 19744820 -83750154 + AT_rich Low_complexity Low_complexity 1 43 0 3 735 421 265 40 3 chr15 19744842 19744957 -83750017 + B1_Mur2 SINE Alu 26 147 -1 3 735 23 68 0 0 chr15 19745166 19745210 -83749764 + AT_rich Low_complexity Low_complexity 1 44 0 3 735 3102 145 42 12 chr15 19745555 19746059 -83748915 + Lx3C LINE L1 6423 6941 -35 3 735 23 54 0 0 chr15 19746061 19746098 -83748876 + AT_rich Low_complexity Low_complexity 1 37 0 3 735 1413 258 61 23 chr15 19746840 19747233 -83747741 + MT2A LTR ERVL 3 410 -123 3 735 25 51 0 0 chr15 19747278 19747317 -83747657 + AT_rich Low_complexity Low_complexity 1 39 0 3 735 4016 93 12 2 chr15 19747391 19747950 -83747024 + L1_Mus3 LINE L1 6013 6577 -61 3 735 1324 259 114 44 chr15 19748120 19748534 -83746440 + RMER2 LTR ERV1 1 457 -110 3 735 2202 145 259 2 chr15 19748534 19748997 -83745977 - RLTR31A_Mm LTR ERVK -2 582 1 3 735 1324 259 114 44 chr15 19748997 19749107 -83745867 + RMER2 LTR ERV1 458 562 -5 3 735 234 0 0 0 chr15 19750831 19750857 -83744117 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 3 735 304 279 35 98 chr15 19751086 19751229 -83743745 - B2_Mm2 SINE B2 -56 139 6 3 735 1516 323 52 24 chr15 19751433 19752102 -83742872 - Lx8 LINE L1 -322 7151 6464 3 735 354 255 81 10 chr15 19752131 19752230 -83742744 + B3 SINE B2 18 123 -93 3 735 602 323 57 37 chr15 19752281 19752525 -83742449 - Lx8 LINE L1 -1042 6431 6183 3 735 336 352 40 27 chr15 19752545 19752694 -83742280 + ORR1E LTR MaLR 5 155 -204 3 735 275 363 11 106 chr15 19753150 19753338 -83741636 - Lx8 LINE L1 -157 7316 7147 3 735 519 17 0 0 chr15 19753615 19753675 -83741299 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 735 234 311 112 24 chr15 19755486 19755611 -83739363 - MLT2B4 LTR ERVL -402 154 19 3 735 366 294 92 36 chr15 19755750 19756110 -83738864 + Lx LINE L1 3655 4034 -2109 3 735 250 312 43 35 chr15 19756130 19756246 -83738728 + ORR1D2 LTR MaLR 254 370 0 3 735 543 16 0 0 chr15 19758229 19758293 -83736681 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 3 735 584 287 172 21 chr15 19758444 19758771 -83736203 - MTEb LTR MaLR -2 377 2 3 735 350 280 228 35 chr15 19759161 19759420 -83735554 - L1M2 LINE L1 -1127 5016 4708 3 735 3552 147 46 19 chr15 19759500 19760217 -83734757 - RMER17A LTR ERVK -15 736 1 3 735 4432 221 43 20 chr15 19760237 19761433 -83733541 + Lx LINE L1 5323 6513 -141 3 735 1531 82 28 80 chr15 19761434 19761685 -83733289 + L1_Mus2 LINE L1 6329 6566 0 3 735 5401 78 10 0 chr15 19762081 19763016 -83731958 - L1_Mus1 LINE L1 -261 6306 5363 3 735 1181 269 112 46 chr15 19763044 19763313 -83731661 + Lx7 LINE L1 7069 7364 -332 3 735 210 91 0 0 chr15 19763313 19763346 -83731628 + (TTG)n Simple_repeat Simple_repeat 2 34 0 3 735 1181 269 112 46 chr15 19763346 19763664 -83731310 + Lx7 LINE L1 7365 7695 -1 3 735 1059 116 0 0 chr15 19763882 19764029 -83730945 - B1_Mus1 SINE Alu -1 147 1 3 735 180 339 0 0 chr15 19764446 19764502 -83730472 - MIR SINE MIR -87 121 66 3 735 373 0 20 0 chr15 19764526 19764576 -83730398 - L1_Mus2 LINE L1 0 6566 6516 3 735 317 68 26 40 chr15 19764994 19765070 -83729904 + (TTTG)n Simple_repeat Simple_repeat 2 76 0 3 735 254 327 68 25 chr15 19765567 19765730 -83729244 + RMER15 LTR ERVL 385 554 -21 3 735 252 350 0 0 chr15 19765766 19765846 -83729128 - B4A SINE B4 -208 84 5 3 735 192 77 0 0 chr15 19765870 19765896 -83729078 + (CCCTAA)n Simple_repeat Simple_repeat 5 30 0 3 735 219 217 0 0 chr15 19765920 19765980 -83728994 + CT-rich Low_complexity Low_complexity 3 62 0 3 735 606 96 0 0 chr15 19766163 19766267 -83728707 + (GA)n Simple_repeat Simple_repeat 2 105 0 3 735 22 0 0 0 chr15 19766664 19766686 -83728288 + AT_rich Low_complexity Low_complexity 1 22 0 3 735 252 333 86 81 chr15 19766710 19766919 -83728055 - MER82 DNA MER2_type -25 628 419 3 735 27 0 0 0 chr15 19767980 19768007 -83726967 + AT_rich Low_complexity Low_complexity 1 27 0 3 735 24 0 0 0 chr15 19768768 19768792 -83726182 + AT_rich Low_complexity Low_complexity 1 24 0 3 735 258 32 0 0 chr15 19769935 19769966 -83725008 + (T)n Simple_repeat Simple_repeat 1 31 0 3 735 508 332 91 11 chr15 19770471 19770657 -83724317 - B3 SINE B2 0 216 16 3 735 1734 172 21 50 chr15 19770886 19771307 -83723667 - RLTR9E LTR ERVK 0 409 1 3 735 23 0 0 0 chr15 19771360 19771383 -83723591 + AT_rich Low_complexity Low_complexity 1 23 0 3 735 207 0 0 0 chr15 19771934 19771957 -83723017 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 735 1524 184 308 51 chr15 19772813 19773362 -83721612 - RMER6C LTR ERVK 0 690 1 3 735 6683 66 0 19 chr15 19773364 19774256 -83720718 + L1Md_T LINE L1 268 1142 -5380 3 735 16079 32 3 0 chr15 19776665 19778605 -83716369 + L1Md_T LINE L1 3644 5589 -297 3 735 8407 35 0 0 chr15 19778605 19779601 -83715373 + L1Md_T LINE L1 5590 6585 0 3 735 32 86 0 0 chr15 19779739 19779820 -83715154 + AT_rich Low_complexity Low_complexity 1 81 0 3 735 31 0 0 0 chr15 19779860 19779891 -83715083 + AT_rich Low_complexity Low_complexity 1 31 0 3 735 238 224 47 0 chr15 19780683 19780754 -83714220 - L1M5 LINE L1 -1007 5437 5364 3 735 342 332 85 25 chr15 19780836 19781037 -83713937 - L1M2 LINE L1 -869 5274 5062 3 735 358 284 37 3 chr15 19781060 19781211 -83713763 + L1_Rod LINE L1 5436 5576 -271 3 735 444 171 0 0 chr15 19781352 19781434 -83713540 + (CATA)n Simple_repeat Simple_repeat 2 83 0 3 735 657 309 51 32 chr15 19781675 19782012 -83712962 + RMER15 LTR ERVL 2 396 -179 3 735 213 39 0 0 chr15 19782094 19782120 -83712854 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 735 26 74 0 0 chr15 19782351 19782405 -83712569 + AT_rich Low_complexity Low_complexity 1 54 0 3 735 183 80 0 0 chr15 19783378 19783403 -83711571 + (T)n Simple_repeat Simple_repeat 1 25 0 4 735 2122 145 13 23 chr15 19784279 19784673 -83710301 + Lx3B LINE L1 6574 6963 -10 4 735 229 26 26 26 chr15 19784673 19784712 -83710262 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 735 1196 54 0 0 chr15 19785111 19785258 -83709716 - B1_Mus2 SINE Alu 0 147 1 4 735 1202 112 0 50 chr15 19785287 19785485 -83709489 + MTB_Mm LTR MaLR 1 188 -208 4 735 621 97 11 11 chr15 19785476 19785570 -83709404 + B1_Mus2 SINE Alu 41 134 -13 4 735 267 31 0 0 chr15 19785570 19785602 -83709372 + (CAAAA)n Simple_repeat Simple_repeat 1 32 0 4 735 342 0 0 0 chr15 19785604 19785642 -83709332 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 4 735 1504 105 0 0 chr15 19785676 19785885 -83709089 + MTB_Mm LTR MaLR 195 403 -4 4 735 942 98 35 14 chr15 19785885 19786030 -83708944 + B1_Mus1 SINE Alu 1 148 0 4 735 1016 112 12 0 chr15 19786073 19786234 -83708740 + (GAAA)n Simple_repeat Simple_repeat 4 166 0 4 735 3117 85 23 33 chr15 19786937 19787424 -83707550 - RLTR45 LTR ERVK 0 482 1 4 735 41 28 0 40 chr15 19788077 19788122 -83706852 + AT_rich Low_complexity Low_complexity 1 44 0 4 735 560 165 0 8 chr15 19788122 19788244 -83706730 - Lx3A LINE L1 -7 6974 6854 4 735 41 28 0 40 chr15 19788244 19788272 -83706702 + AT_rich Low_complexity Low_complexity 1 27 0 4 735 640 363 20 24 chr15 19789116 19789367 -83705607 + MTE2b LTR MaLR 20 269 -110 4 735 707 187 7 48 chr15 19789369 19789515 -83705459 - B1_Mus2 SINE Alu -6 141 2 4 735 306 0 0 0 chr15 19790243 19790277 -83704697 + (TTG)n Simple_repeat Simple_repeat 3 36 0 4 735 1063 90 6 11 chr15 19790676 19790856 -83704118 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 735 321 244 0 34 chr15 19790858 19790947 -83704027 - RMER3D-int LTR ERVK -1595 1247 1162 4 735 1973 179 41 56 chr15 19790974 19791490 -83703484 - RMER3D-int LTR ERVK -410 2432 1925 4 735 572 177 48 41 chr15 19791509 19791656 -83703318 - RMER3D-int LTR ERVK -1163 1679 1532 4 91 1887 186 5 18 chr15 19791689 19792073 -83702901 - RMER3D-int LTR ERVK -1309 1533 1155 4 736 435 154 2 11 chr15 19792088 19792184 -83702790 - RMER3D-int LTR ERVK -2285 557 470 4 736 347 75 35 70 chr15 19792210 19792296 -83702678 + CT-rich Low_complexity Low_complexity 3 85 0 4 736 745 185 71 27 chr15 19792310 19792642 -83702332 - RMER3D-int LTR ERVK -2006 836 359 4 736 358 250 0 29 chr15 19792708 19792844 -83702130 - RMER3D-int LTR ERVK -1993 849 718 4 736 2805 74 14 24 chr15 19792844 19793257 -83701717 + RLTR9F LTR ERVK 1 409 -6 4 736 390 162 0 63 chr15 19793258 19793337 -83701637 - RMER3D-int LTR ERVK -2117 725 652 4 736 311 111 0 0 chr15 19793353 19793398 -83701576 - RMER3D-int LTR ERVK -6351 1055 1011 4 736 523 84 0 0 chr15 19793365 19793436 -83701538 - RMER3D-int LTR ERVK -2278 564 494 4 736 1265 88 112 2 chr15 19793752 19793974 -83701000 - BGLII LTR ERVK -196 226 1 4 736 811 322 63 23 chr15 19794122 19794421 -83700553 + MTEa LTR MaLR 69 379 0 4 736 210 37 0 0 chr15 19794467 19794494 -83700480 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 736 3131 133 0 4 chr15 19794507 19794999 -83699975 - L1_Mus1 LINE L1 -688 5195 4706 4 736 7393 92 1 1 chr15 19795003 19796354 -83698620 + L1_Mus1 LINE L1 5216 6567 0 4 736 1727 108 12 117 chr15 19796367 19796691 -83698283 - L1_Mus2 LINE L1 -6 6560 6271 4 736 2498 85 0 3 chr15 19796691 19797033 -83697941 + L1_Mus2 LINE L1 5947 6287 -279 4 736 349 327 95 38 chr15 19797033 19797243 -83697731 - RMER5 LTR ERV1 -273 261 40 4 736 29 28 0 0 chr15 19797928 19797964 -83697010 + AT_rich Low_complexity Low_complexity 1 36 0 4 736 1047 116 0 7 chr15 19798001 19798149 -83696825 - B1_Mus1 SINE Alu 0 148 2 4 736 694 215 22 0 chr15 19798184 19798319 -83696655 + B1_Mur4 SINE Alu 6 143 -7 4 736 387 0 0 0 chr15 19798321 19798364 -83696610 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 4 736 1037 267 29 39 chr15 19798897 19799205 -83695769 + MTD LTR MaLR 115 419 0 4 736 606 366 74 26 chr15 19799494 19800075 -83694899 - L1M4 LINE L1 -1112 5034 4426 4 736 772 252 34 114 chr15 19800827 19801239 -83693735 + Lx9 LINE L1 7212 7590 -54 4 736 950 212 30 37 chr15 19801238 19801536 -83693438 + L1_Rod LINE L1 4528 4823 -1024 4 736 523 194 148 82 chr15 19801555 19801858 -83693116 + Lx9 LINE L1 7319 7641 -3 4 736 437 62 15 0 chr15 19802061 19802126 -83692848 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 736 23 112 0 0 chr15 19803494 19803601 -83691373 + AT_rich Low_complexity Low_complexity 1 107 0 4 736 25 0 0 0 chr15 19803638 19803663 -83691311 + AT_rich Low_complexity Low_complexity 1 25 0 4 736 503 339 22 11 chr15 19803924 19804106 -83690868 + MER2 DNA MER2_type 86 269 -76 4 736 1792 157 21 51 chr15 19804117 19804452 -83690522 - ORR1A4 LTR MaLR 0 329 5 4 736 360 201 122 42 chr15 19804508 19804567 -83690407 + Lx7 LINE L1 7465 7522 -174 4 736 1051 71 21 0 chr15 19804567 19804707 -83690267 - B1_Mm SINE Alu 0 147 5 4 736 360 201 122 42 chr15 19804707 19804860 -83690114 + Lx7 LINE L1 7523 7694 -2 4 736 5202 110 10 10 chr15 19804959 19805751 -83689223 + L1_Mus3 LINE L1 5846 6637 -1 4 736 307 388 55 17 chr15 19805784 19805965 -83689009 + MLT1E2 LTR MaLR 268 455 -172 4 736 373 359 39 8 chr15 19806094 19806223 -83688751 + RSINE1 SINE B4 19 151 -14 4 736 615 108 0 0 chr15 19806225 19806327 -83688647 + (CA)n Simple_repeat Simple_repeat 1 102 0 4 736 24 32 0 0 chr15 19806389 19806420 -83688554 + AT_rich Low_complexity Low_complexity 1 31 0 4 736 502 228 35 42 chr15 19806420 19806562 -83688412 - Lx5 LINE L1 0 7050 6910 4 736 528 276 28 0 chr15 19806567 19806712 -83688262 - Lx5 LINE L1 -749 6301 6153 4 736 249 180 0 0 chr15 19807003 19807053 -83687921 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 736 200 232 20 50 chr15 19808151 19808251 -83686723 + T-rich Low_complexity Low_complexity 4 100 0 4 736 461 318 59 47 chr15 19808700 19808938 -83686036 + ORR1E LTR MaLR 3 241 -129 4 736 308 211 0 13 chr15 19809024 19809059 -83685915 + polypurine Low_complexity Low_complexity 2 36 0 4 736 954 128 6 11 chr15 19809059 19809233 -83685741 + (GGAA)n Simple_repeat Simple_repeat 1 173 0 4 736 308 211 0 13 chr15 19809233 19809274 -83685700 + polypurine Low_complexity Low_complexity 37 77 0 4 736 2045 9 0 0 chr15 19809564 19809796 -83685178 + L1Md_A LINE L1 6351 6582 0 4 736 414 373 5 21 chr15 19811662 19811851 -83683123 - ORR1D2 LTR MaLR -13 357 172 4 736 396 0 0 0 chr15 19811855 19811899 -83683075 + (GA)n Simple_repeat Simple_repeat 1 44 0 4 736 448 277 20 0 chr15 19811912 19812013 -83682961 - ORR1D2 LTR MaLR -255 115 13 4 736 535 338 24 5 chr15 19812025 19812230 -83682744 - ORR1D2-int LTR MaLR -6 1364 1156 4 736 447 231 16 8 chr15 19812240 19812354 -83682620 - L1_Mur2 LINE L1 -3712 2165 2050 4 736 1134 122 0 0 chr15 19812354 19812534 -83682440 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 736 429 20 0 0 chr15 19812730 19812780 -83682194 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 736 297 355 176 73 chr15 19813269 19813570 -83681404 + MER70B LTR ERVL 14 345 -233 4 736 291 234 0 0 chr15 19813625 19813702 -83681272 + (TA)n Simple_repeat Simple_repeat 1 77 0 4 736 275 329 75 41 chr15 19813707 19813973 -83681001 - RMER12 LTR ERVK -358 964 690 4 736 1813 45 4 20 chr15 19814327 19814574 -83680400 - L1Md_F2 LINE L1 -3 6579 6337 4 736 356 275 11 11 chr15 19814615 19814707 -83680267 + HAL1-3A_ME LINE L1 1975 2066 -792 4 736 958 322 66 36 chr15 19815575 19816042 -83678932 - Lx5 LINE L1 -58 6992 6512 4 736 387 255 0 96 chr15 19817054 19817210 -83677764 - Lx7 LINE L1 0 7696 7556 4 736 34428 78 2 3 chr15 19817264 19823584 -83671390 - L1Md_F2 LINE L1 0 6585 176 4 736 346 244 79 25 chr15 19823619 19823668 -83671306 - Lx7 LINE L1 -156 7540 7494 4 736 204 40 0 0 chr15 19823668 19823693 -83671281 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 736 346 244 79 25 chr15 19823693 19823845 -83671129 - Lx7 LINE L1 -203 7493 7328 4 736 759 103 9 0 chr15 19823894 19824010 -83670964 - Lx3A LINE L1 -715 6294 6178 4 736 4701 120 27 18 chr15 19823990 19824912 -83670062 - Lx3A LINE L1 -948 6033 5112 4 736 25 51 0 0 chr15 19825364 19825403 -83669571 + AT_rich Low_complexity Low_complexity 1 39 0 4 736 536 79 0 22 chr15 19825609 19825700 -83669274 - L1Md_F3 LINE L1 -3 6581 6493 4 736 369 43 0 0 chr15 19825968 19826015 -83668959 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 736 366 80 0 0 chr15 19826770 19826820 -83668154 + L1Md_F2 LINE L1 5536 5585 -298 4 736 7492 68 6 3 chr15 19826821 19827802 -83667172 + L1Md_F2 LINE L1 5587 6570 -12 4 736 1825 128 0 20 chr15 19829183 19829486 -83665488 - L1_Mus4 LINE L1 -4 6632 6336 4 736 238 258 34 0 chr15 19830028 19830117 -83664857 + (TA)n Simple_repeat Simple_repeat 1 92 0 4 736 22 80 0 0 chr15 19830823 19830873 -83664101 + AT_rich Low_complexity Low_complexity 1 50 0 4 736 276 250 0 14 chr15 19831574 19831643 -83663331 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 736 366 313 89 17 chr15 19831825 19832004 -83662970 - L1MCb LINE L1 -4952 1093 902 4 736 58 47 0 0 chr15 19832840 19832926 -83662048 + AT_rich Low_complexity Low_complexity 1 86 0 4 736 2438 263 69 66 chr15 19833347 19834301 -83660673 - RMER17B LTR ERVK -1 957 1 4 736 204 125 0 0 chr15 19835394 19835426 -83659548 + (T)n Simple_repeat Simple_repeat 1 32 0 4 736 754 320 74 24 chr15 19835784 19836162 -83658812 - Lx6 LINE L1 -27 7433 7037 4 736 700 247 10 91 chr15 19836672 19836881 -83658093 - B3 SINE B2 0 216 25 4 736 309 51 0 0 chr15 19837191 19837230 -83657744 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 736 4094 116 11 18 chr15 19837230 19837844 -83657130 - Lx3A LINE L1 -42 6939 6330 4 736 1156 148 108 0 chr15 19837928 19838063 -83656911 - L1_Mur2 LINE L1 -1102 4775 4624 4 736 207 0 0 0 chr15 19838063 19838086 -83656888 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 736 1156 148 108 0 chr15 19838086 19838173 -83656801 - L1_Mur2 LINE L1 -1254 4623 4530 4 736 1156 190 32 4 chr15 19838196 19838444 -83656530 + Lx3C LINE L1 4836 5090 -787 4 736 2892 135 11 0 chr15 19838454 19838983 -83655991 + Lx3C LINE L1 5402 5932 -1044 4 736 3163 164 18 49 chr15 19838983 19839598 -83655376 + Lx3C LINE L1 6372 6967 -9 4 736 489 80 0 0 chr15 19839649 19839724 -83655250 + (TCTCTG)n Simple_repeat Simple_repeat 2 76 0 4 736 327 367 53 20 chr15 19840252 19840402 -83654572 - ID_B1 SINE B4 -52 172 18 4 736 997 282 45 13 chr15 19840402 19840468 -83654506 + L1_Mur3 LINE L1 5474 5543 -337 4 736 919 225 17 43 chr15 19840468 19840700 -83654274 - URR1A DNA MER1_type 0 226 1 4 736 997 282 45 13 chr15 19840700 19841010 -83653964 + L1_Mur3 LINE L1 5544 5862 -18 4 736 452 305 35 0 chr15 19841428 19841569 -83653405 + Lx8 LINE L1 7008 7153 -320 4 736 878 334 14 66 chr15 19841591 19841953 -83653021 + ORR1D1 LTR MaLR 4 346 -28 4 736 1024 284 25 7 chr15 19842180 19842457 -83652517 + Lx6 LINE L1 6973 7254 -206 5 736 590 195 42 0 chr15 19842457 19842575 -83652399 + URR1B DNA MER1_type 103 225 0 5 736 494 210 31 0 chr15 19842575 19842680 -83652294 - Lx7 LINE L1 -425 7035 6921 5 736 532 165 9 9 chr15 19842767 19842883 -83652091 + GA-rich Low_complexity Low_complexity 2 117 0 5 736 465 262 63 7 chr15 19842911 19843053 -83651921 + Lx7 LINE L1 6770 6919 -777 5 736 24073 135 24 54 chr15 19843130 19850294 -83644680 - L1_Mus1 LINE L1 0 6567 98 5 736 21 0 0 0 chr15 19850393 19850414 -83644560 + AT_rich Low_complexity Low_complexity 1 21 0 5 736 33175 70 2 2 chr15 19852104 19854044 -83640930 - L1Md_F2 LINE L1 -2 6580 4640 5 736 254 29 29 0 chr15 19854044 19854079 -83640895 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 5 736 33175 92 4 4 chr15 19854079 19858241 -83636733 - L1Md_F2 LINE L1 -1244 4639 476 5 736 23 0 0 0 chr15 19858382 19858405 -83636569 + AT_rich Low_complexity Low_complexity 1 23 0 5 736 281 331 62 43 chr15 19858821 19858982 -83635992 - MLT1G3 LTR MaLR -87 508 345 5 736 678 368 19 8 chr15 19859384 19859650 -83635324 + MTD LTR MaLR 8 276 -143 5 736 261 0 0 0 chr15 19859658 19859687 -83635287 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 736 2355 108 6 0 chr15 19859692 19860036 -83634938 - L1_Mus3 LINE L1 -7 6631 6286 5 736 2159 128 12 6 chr15 19860036 19860374 -83634600 + L1_Mus3 LINE L1 5917 6256 -382 5 736 3884 122 61 7 chr15 19860337 19860957 -83634017 - Lx2 LINE L1 -223 6774 6121 5 736 1475 309 86 62 chr15 19860998 19861742 -83633232 + MTC-int LTR MaLR 1 762 -496 5 736 219 242 0 0 chr15 19862240 19862302 -83632672 + GA-rich Low_complexity Low_complexity 3 64 0 5 736 278 307 177 21 chr15 19862846 19863335 -83631639 + L1MB1 LINE L1 5422 5997 -171 5 736 258 32 0 0 chr15 19863427 19863458 -83631516 + (A)n Simple_repeat Simple_repeat 1 31 0 5 736 2512 164 4 39 chr15 19863488 19863950 -83631024 + Lx3B LINE L1 6159 6604 -369 5 736 2954 98 2 2 chr15 19863950 19864371 -83630603 + BGLII LTR ERVK 1 421 0 5 736 506 117 0 0 chr15 19864774 19864862 -83630112 + RMER3D-int LTR ERVK 489 564 -2278 5 736 747 236 72 58 chr15 19864877 19865121 -83629853 + RMER3D-int LTR ERVK 331 583 -2259 5 736 1121 111 0 11 chr15 19865121 19865303 -83629671 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 5 736 1180 0 0 82 chr15 19865305 19865501 -83629473 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 5 736 747 236 72 58 chr15 19865501 19865545 -83629429 + RMER3D-int LTR ERVK 584 626 -2216 5 736 1648 183 129 25 chr15 19865537 19866017 -83628957 + RMER3D-int LTR ERVK 1014 1543 -1299 5 736 587 164 44 82 chr15 19866040 19866199 -83628775 + RMER3D-int LTR ERVK 1538 1690 -1152 5 736 2950 223 46 47 chr15 19866203 19867117 -83627857 + RMER3D-int LTR ERVK 1925 2837 -5 5 736 2730 84 42 5 chr15 19867122 19867528 -83627446 + BGLII LTR ERVK 1 421 0 5 736 1288 144 45 9 chr15 19867528 19867752 -83627222 + Lx3B LINE L1 6599 6830 -143 5 736 3972 165 10 3 chr15 19867755 19868461 -83626513 + Lx2 LINE L1 6287 6997 0 5 736 207 170 0 0 chr15 19868584 19868631 -83626343 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 736 27 87 0 0 chr15 19868825 19868894 -83626080 + AT_rich Low_complexity Low_complexity 1 69 0 5 736 26 74 0 0 chr15 19871373 19871427 -83623547 + AT_rich Low_complexity Low_complexity 1 54 0 5 736 549 0 0 0 chr15 19872188 19872249 -83622725 + (TA)n Simple_repeat Simple_repeat 2 62 0 5 736 275 233 0 10 chr15 19872323 19872427 -83622547 + (TA)n Simple_repeat Simple_repeat 2 104 0 5 736 1487 139 20 0 chr15 19872512 19872764 -83622210 + MusHAL1 LINE L1 1456 1712 -1000 5 736 18740 133 47 19 chr15 19872767 19874510 -83620464 + L1Md_F LINE L1 208 1969 -3914 5 736 198 0 0 0 chr15 19874510 19874532 -83620442 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 5 736 18740 97 42 0 chr15 19874532 19876597 -83618377 + L1Md_F LINE L1 1970 4154 -1729 5 736 1104 150 5 5 chr15 19876597 19876798 -83618176 + L1Md_F2 LINE L1 6370 6570 -12 5 736 205 278 19 0 chr15 19877170 19877224 -83617750 + CT-rich Low_complexity Low_complexity 1 55 0 5 736 288 280 51 17 chr15 19877350 19877528 -83617446 - L1MA9 LINE L1 -10 6302 6119 5 736 1873 137 74 0 chr15 19877536 19877886 -83617088 + MusHAL1 LINE L1 1709 2084 -628 5 736 2735 129 44 20 chr15 19877983 19878440 -83616534 + Lx3A LINE L1 6510 6977 -4 5 736 26 50 0 0 chr15 19878441 19878481 -83616493 + AT_rich Low_complexity Low_complexity 1 40 0 5 736 247 349 19 9 chr15 19878779 19878886 -83616088 - LTR40a LTR ERVL -300 219 112 5 736 26 88 0 0 chr15 19879194 19879262 -83615712 + AT_rich Low_complexity Low_complexity 1 68 0 5 736 21 36 0 0 chr15 19879322 19879350 -83615624 + AT_rich Low_complexity Low_complexity 1 28 0 5 736 15647 95 19 1 chr15 19880358 19883287 -83611687 - L1Md_F2 LINE L1 -2 6580 3611 5 736 3379 118 32 14 chr15 19883281 19883974 -83611000 - L1Md_F2 LINE L1 -4083 1800 1105 5 736 37978 39 4 6 chr15 19883972 19890158 -83604816 - L1Md_T LINE L1 -2 6580 412 5 736 4698 117 14 1 chr15 19890153 19890891 -83604083 - L1Md_F LINE L1 -5493 1026 280 5 736 360 0 0 0 chr15 19891076 19891116 -83603858 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 736 269 342 43 0 chr15 19891165 19891282 -83603692 - Lx8 LINE L1 -164 7309 7188 5 736 282 258 21 31 chr15 19891350 19891446 -83603528 + CT-rich Low_complexity Low_complexity 3 97 0 5 736 329 58 0 19 chr15 19892119 19892172 -83602802 + (TTTTG)n Simple_repeat Simple_repeat 4 55 0 5 736 1882 294 10 8 chr15 19892174 19892689 -83602285 - Lx5 LINE L1 -3 7047 6532 5 736 630 258 10 107 chr15 19892691 19892991 -83601983 - Lx2B LINE L1 0 7000 6730 5 736 1405 230 46 9 chr15 19892979 19893326 -83601648 - Lx2B LINE L1 -485 6515 6156 5 736 1354 117 29 0 chr15 19893330 19893535 -83601439 - MTB LTR MaLR -8 392 182 5 736 189 300 0 0 chr15 19893545 19893615 -83601359 + T-rich Low_complexity Low_complexity 5 74 0 5 736 771 148 0 0 chr15 19893612 19893747 -83601227 + (TCCC)n Simple_repeat Simple_repeat 2 136 0 5 736 10516 118 35 2 chr15 19893752 19896294 -83598680 - L1_Mus3 LINE L1 0 6638 4002 5 736 4460 117 3 7 chr15 19896295 19897042 -83597932 - MusHAL1 LINE L1 -949 1763 1020 5 736 4808 133 25 54 chr15 19897044 19897955 -83597019 - L1VL1 LINE L1 -5452 970 86 5 736 794 194 30 6 chr15 19897955 19898153 -83596821 + ORR1A3 LTR MaLR 180 384 0 5 736 935 288 83 0 chr15 19898319 19898645 -83596329 + Lx6 LINE L1 6131 6483 -977 5 736 672 239 54 30 chr15 19898896 19899064 -83595910 + MTB_Mm LTR MaLR 1 172 -235 5 736 525 252 8 22 chr15 19899049 19899183 -83595791 + MTB_Mm LTR MaLR 288 419 -2 5 736 567 195 0 0 chr15 19899462 19899580 -83595394 + (TA)n Simple_repeat Simple_repeat 2 119 0 5 736 295 221 8 111 chr15 19901356 19901473 -83593501 + MT2B LTR ERVL 165 269 -332 5 736 531 217 8 42 chr15 19901379 19901499 -83593475 + B1_Mur4 SINE Alu 22 137 -13 5 736 1114 89 6 6 chr15 19901547 19901717 -83593257 + (GAA)n Simple_repeat Simple_repeat 2 171 0 5 736 1576 178 0 3 chr15 19904157 19904450 -83590524 + Lx2 LINE L1 6696 6987 -10 5 736 270 152 0 0 chr15 19904606 19904665 -83590309 + GA-rich Low_complexity Low_complexity 2 60 0 5 736 43 20 0 0 chr15 19904685 19904735 -83590239 + AT_rich Low_complexity Low_complexity 1 50 0 5 736 250 243 0 13 chr15 19904843 19904918 -83590056 + A-rich Low_complexity Low_complexity 1 74 0 5 736 24 0 0 0 chr15 19905699 19905723 -83589251 + AT_rich Low_complexity Low_complexity 1 24 0 5 736 462 235 118 41 chr15 19905939 19906108 -83588866 + RLTR40 LTR ERVK 104 285 -532 5 736 663 201 56 56 chr15 19906567 19906762 -83588212 - RMER17C-int LTR ERVK -2910 328 134 5 736 647 198 75 64 chr15 19906783 19906956 -83588018 - RMER17C-int LTR ERVK -3062 176 2 5 736 1380 203 70 63 chr15 19906965 19907364 -83587610 - RMER17C LTR ERVK -8 402 1 5 736 499 236 64 64 chr15 19907379 19907583 -83587391 + RLTR40 LTR ERVK 409 612 -205 5 736 249 33 0 0 chr15 19908084 19908114 -83586860 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 5 736 2113 210 13 18 chr15 19908114 19908565 -83586409 - Lx4B LINE L1 -14 7044 6596 5 736 4753 160 65 16 chr15 19908570 19909777 -83585197 + L1VL2 LINE L1 66 1191 -2424 5 736 4100 114 13 0 chr15 19909768 19910564 -83584410 + Lx LINE L1 5144 5955 -683 5 736 3038 151 22 15 chr15 19910568 19911112 -83583862 + Lx LINE L1 6107 6654 0 5 736 1035 173 80 0 chr15 19911486 19911701 -83583273 - Lx4B LINE L1 -489 6569 6362 5 736 279 278 26 0 chr15 19913363 19913489 -83581485 + L1_Mur3 LINE L1 86 200 -7528 5 736 1541 226 21 23 chr15 19913516 19914184 -83580790 + L1_Mur3 LINE L1 1023 1688 -4192 5 736 814 290 128 26 chr15 19914182 19914273 -83580701 - Lx6 LINE L1 -404 7056 6961 5 736 4991 114 64 65 chr15 19914273 19914367 -83580607 - RLTR13D6 LTR ERVK 0 902 803 5 736 459 0 0 0 chr15 19914367 19914418 -83580556 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 736 4991 114 64 65 chr15 19914418 19914478 -83580496 - RLTR13D6 LTR ERVK -100 802 737 5 736 1158 68 0 0 chr15 19914478 19914625 -83580349 + B1_Mm SINE Alu 1 147 0 5 736 4991 114 64 65 chr15 19914625 19915372 -83579602 - RLTR13D6 LTR ERVK -166 736 3 5 736 814 290 128 26 chr15 19915372 19915695 -83579279 - Lx6 LINE L1 -500 6960 6600 5 736 1832 222 13 102 chr15 19915695 19916186 -83578788 + RLTR11A LTR ERVK 38 500 -28 5 736 213 262 78 47 chr15 19916189 19916253 -83578721 + B1_Mus2 SINE Alu 33 98 -49 5 736 1475 228 28 36 chr15 19916263 19916627 -83578347 + RMER6C LTR ERVK 330 690 0 5 736 739 212 30 10 chr15 19916629 19916829 -83578145 - Lx6 LINE L1 -1652 5808 5605 5 736 3300 166 19 31 chr15 19916888 19917524 -83577450 - RLTR5_Mm LTR ERV1 0 628 1 5 736 355 303 27 9 chr15 19917546 19917656 -83577318 - Lx6 LINE L1 -922 6538 6427 5 736 201 39 0 0 chr15 19917685 19917711 -83577263 + (CAAT)n Simple_repeat Simple_repeat 2 27 0 5 736 1097 244 26 36 chr15 19917719 19918106 -83576868 + Lx5 LINE L1 4890 5272 -608 5 736 750 241 38 8 chr15 19918797 19919035 -83575939 + Lx5 LINE L1 5323 5601 -2394 5 736 2611 179 27 10 chr15 19919043 19919556 -83575418 - Lx2 LINE L1 0 6997 6476 5 736 1513 161 77 3 chr15 19919556 19919879 -83575095 + L1_Mur2 LINE L1 5136 5482 -395 5 736 279 298 73 70 chr15 19919893 19920226 -83574748 - BGLII_B LTR ERVK -29 498 123 5 736 1209 283 64 53 chr15 19920351 19921123 -83573851 + Lx5 LINE L1 5587 6349 -1347 5 736 1871 133 253 31 chr15 19921234 19921684 -83573290 + RLTR6_Mm LTR ERV1 37 586 -68 5 736 1136 302 57 69 chr15 19921684 19922065 -83572909 + Lx5 LINE L1 6346 6749 -947 5 736 1019 142 0 6 chr15 19922065 19922242 -83572732 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 5 736 1316 306 55 53 chr15 19922242 19922483 -83572491 + Lx5 LINE L1 6454 6885 -811 5 736 450 0 0 0 chr15 19922483 19922533 -83572441 + (CAAAA)n Simple_repeat Simple_repeat 3 52 0 5 736 1316 317 52 18 chr15 19922533 19922924 -83572050 + Lx5 LINE L1 6636 7044 -6 5 737 1727 287 33 29 chr15 19923039 19923360 -83571614 + Lx7 LINE L1 6693 7018 -678 5 737 1029 78 14 0 chr15 19923360 19923502 -83571472 + B1_Mus1 SINE Alu 1 144 -4 5 737 297 0 0 0 chr15 19923504 19923537 -83571437 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 737 1727 287 33 29 chr15 19923537 19923844 -83571130 + Lx7 LINE L1 7019 7327 -369 5 737 1363 165 27 8 chr15 19923971 19924227 -83570747 - Lx LINE L1 -5 6649 6389 5 737 2439 212 115 70 chr15 19924248 19925098 -83569876 + RLTR13D6 LTR ERVK 6 856 -46 5 737 1519 153 4 0 chr15 19925098 19925359 -83569615 - Lx LINE L1 -259 6395 6134 5 737 1898 163 29 46 chr15 19925357 19925502 -83569472 + L1_Mur2 LINE L1 4481 4637 -1240 6 737 248 0 31 0 chr15 19925502 19925534 -83569440 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 6 737 1898 163 29 46 chr15 19925534 19925799 -83569175 + L1_Mur2 LINE L1 4638 4884 -993 6 737 245 196 18 0 chr15 19925809 19925865 -83569109 + T-rich Low_complexity Low_complexity 3 59 0 6 737 708 304 17 57 chr15 19926024 19926051 -83568923 - MT2B LTR ERVL -41 560 532 6 737 429 66 0 0 chr15 19926051 19926112 -83568862 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 6 737 708 292 58 38 chr15 19926112 19926404 -83568570 - MT2B LTR ERVL -70 531 92 6 737 735 193 116 23 chr15 19926566 19926902 -83568072 - RLTR19 LTR ERVK -77 422 1 6 737 231 220 203 0 chr15 19926932 19926991 -83567983 - RLTR31_Mm LTR ERVK 0 561 491 6 737 760 158 29 7 chr15 19926958 19927098 -83567876 - RLTR17 LTR ERVK -259 433 291 6 737 2759 67 229 9 chr15 19927100 19927520 -83567454 - RLTR1B LTR ERV1 0 512 1 6 737 63473 21 0 0 chr15 19927520 19935070 -83559904 - MMERGLN-int LTR ERV1 0 7556 7 6 737 2893 66 200 9 chr15 19935076 19935506 -83559468 - RLTR1B LTR ERV1 0 512 1 6 737 1453 178 83 4 chr15 19935506 19935776 -83559198 - RLTR17 LTR ERVK -399 293 2 6 737 209 62 82 20 chr15 19936476 19936525 -83558449 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 737 386 169 0 0 chr15 19936687 19936752 -83558222 + RMER6D LTR ERVK 1 65 -655 6 737 266 290 117 27 chr15 19938411 19938440 -83556534 + CYRA11_Mm Unknown Y-chromosome 141 186 -431 6 737 885 195 87 0 chr15 19938440 19938625 -83556349 - URR1A DNA MER1_type -1 225 25 6 737 2180 286 132 24 chr15 19939090 19940021 -83554953 - RMER1A Other Other -7 1023 15 6 737 680 285 146 24 chr15 19940172 19940434 -83554540 - RMER1B Other Other -684 382 86 6 737 555 16 0 0 chr15 19940434 19940498 -83554476 + (TC)n Simple_repeat Simple_repeat 1 64 0 6 737 680 285 146 24 chr15 19940498 19940523 -83554451 - RMER1B Other Other -981 85 61 6 737 222 191 32 0 chr15 19940653 19940716 -83554258 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 6 737 297 214 0 0 chr15 19940717 19940815 -83554159 + (TA)n Simple_repeat Simple_repeat 2 99 0 6 737 24 0 0 0 chr15 19940861 19940885 -83554089 + AT_rich Low_complexity Low_complexity 1 24 0 6 737 352 362 22 0 chr15 19941517 19941702 -83553272 + Lx9 LINE L1 6585 6773 -871 6 737 5697 45 1 0 chr15 19942037 19942726 -83552248 + L1Md_F2 LINE L1 5891 6580 -2 6 737 216 0 0 0 chr15 19942888 19942912 -83552062 + (CAA)n Simple_repeat Simple_repeat 2 25 0 6 737 363 78 0 0 chr15 19943139 19943190 -83551784 + (T)n Simple_repeat Simple_repeat 1 51 0 6 737 2227 109 78 3 chr15 19943194 19943526 -83551448 + IAPEY2_LTR LTR ERVK 1 357 0 6 737 2673 148 4 17 chr15 19943526 19943986 -83550988 + IAPEy-int LTR ERVK 1 454 -7059 6 737 1018 142 31 30 chr15 19944397 19944812 -83550162 + IAPEy-int LTR ERVK 409 952 -6629 6 737 1356 189 148 68 chr15 19944924 19945390 -83549584 + IAPEy-int LTR ERVK 251 819 -4587 6 737 441 220 93 0 chr15 19945392 19945510 -83549464 + IAPEy-int LTR ERVK 1721 1849 -5557 6 737 280 279 0 55 chr15 19945521 19945612 -83549362 + IAPEy-int LTR ERVK 2454 2539 -4867 6 737 584 227 0 0 chr15 19945624 19945743 -83549231 + IAPEy-int LTR ERVK 2635 2753 -4653 6 737 437 71 0 0 chr15 19945769 19945825 -83549149 + IAPEy-int LTR ERVK 3567 3622 -3784 6 737 604 61 47 66 chr15 19945824 19945930 -83549044 + IAPEy-int LTR ERVK 4567 4670 -2911 6 737 3145 105 2 16 chr15 19946185 19946631 -83548343 + IAPEy-int LTR ERVK 5203 5642 -1939 6 737 3479 82 0 2 chr15 19946622 19947077 -83547897 + IAPEy-int LTR ERVK 5761 6214 -1367 6 737 5263 105 10 8 chr15 19947069 19947844 -83547130 + IAPEy-int LTR ERVK 6737 7513 0 6 737 2213 94 16 3 chr15 19947855 19948176 -83546798 + IAPEY2_LTR LTR ERVK 33 357 0 6 737 319 300 200 0 chr15 19948795 19948905 -83546069 - B3A SINE B2 -66 132 1 6 737 1140 62 14 0 chr15 19949522 19949668 -83545306 - B1_Mus1 SINE Alu 0 148 1 6 737 448 256 62 0 chr15 19949949 19950078 -83544896 - Lx5 LINE L1 -8 7042 6906 6 737 527 173 37 46 chr15 19951104 19951232 -83543742 + Lx LINE L1 6449 6561 -93 6 737 7347 105 4 0 chr15 19951219 19953019 -83541955 + L1_Mus1 LINE L1 4758 6565 -2 6 737 493 98 103 43 chr15 19953025 19953142 -83541832 + Lx LINE L1 6529 6652 -2 6 737 198 71 0 0 chr15 19953392 19953420 -83541554 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 737 23 0 0 0 chr15 19954433 19954456 -83540518 + AT_rich Low_complexity Low_complexity 1 23 0 6 737 226 247 103 23 chr15 19954471 19954558 -83540416 + Cheshire DNA MER1_type 1775 1868 -552 6 737 987 40 0 0 chr15 19955022 19955146 -83539828 - B1_Mus1 SINE Alu -24 124 1 6 737 263 267 7 20 chr15 19955146 19955188 -83539786 - ORR1B1-int LTR MaLR -863 646 607 6 737 2589 83 3 11 chr15 19956568 19956933 -83538041 - L1Md_F2 LINE L1 -3 6579 6218 6 737 27 0 0 0 chr15 19957749 19957776 -83537198 + AT_rich Low_complexity Low_complexity 1 27 0 6 737 5367 74 42 7 chr15 19958906 19959146 -83535828 - L1Md_F2 LINE L1 0 6582 6348 6 737 318 26 0 0 chr15 19959146 19959185 -83535789 + (TGG)n Simple_repeat Simple_repeat 2 40 0 6 737 5367 74 42 7 chr15 19959185 19959680 -83535294 - L1Md_F2 LINE L1 -235 6347 5822 6 737 201 121 0 0 chr15 19959773 19959806 -83535168 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 737 789 45 44 7 chr15 19959815 19959950 -83535024 + (TAGA)n Simple_repeat Simple_repeat 3 142 0 6 737 425 353 26 0 chr15 19960571 19960823 -83534151 + Lx8 LINE L1 6234 6603 -870 6 737 276 322 35 0 chr15 19960865 19960952 -83534022 + Lx8 LINE L1 7226 7315 -158 6 737 816 214 51 39 chr15 19961081 19961428 -83533546 + Lx9 LINE L1 7249 7643 -1 6 737 21 71 0 0 chr15 19961432 19961474 -83533500 + AT_rich Low_complexity Low_complexity 1 42 0 6 737 475 310 38 52 chr15 19961699 19961910 -83533064 + B3A SINE B2 3 210 -6 6 737 239 161 18 0 chr15 19962051 19962107 -83532867 + (TTTG)n Simple_repeat Simple_repeat 2 58 0 6 737 281 316 84 62 chr15 19962149 19962375 -83532599 + L1MC3 LINE L1 7374 7604 -181 6 737 840 265 96 0 chr15 19962559 19962819 -83532155 + Lx6 LINE L1 7176 7460 0 6 737 1386 79 5 5 chr15 19963081 19963271 -83531703 + B2_Mm2 SINE B2 1 190 -5 6 737 399 364 82 18 chr15 19964440 19964781 -83530193 + Arthur1C DNA Tip100 1 363 0 6 737 2460 135 44 2 chr15 19965080 19965487 -83529487 - Lx2 LINE L1 0 6997 6574 6 737 195 129 0 0 chr15 19965633 19965664 -83529310 + (TA)n Simple_repeat Simple_repeat 1 31 0 6 737 978 47 0 0 chr15 19966199 19966327 -83528647 + (CA)n Simple_repeat Simple_repeat 2 129 0 6 737 313 266 77 0 chr15 19966359 19966472 -83528502 - Lx7 LINE L1 -493 5804 5696 6 737 883 276 117 72 chr15 19966474 19966860 -83528114 - MTD LTR MaLR -8 411 9 6 737 368 329 156 12 chr15 19968569 19968812 -83526162 - L1MEf LINE L1 -4714 1486 1209 6 737 34 42 0 0 chr15 19969594 19969642 -83525332 + AT_rich Low_complexity Low_complexity 1 48 0 6 737 279 0 0 0 chr15 19969706 19969737 -83525237 + (TA)n Simple_repeat Simple_repeat 1 31 0 6 737 21 0 0 0 chr15 19969844 19969865 -83525109 + AT_rich Low_complexity Low_complexity 1 21 0 6 737 905 248 117 11 chr15 19969918 19970191 -83524783 + Lx2B LINE L1 6686 6987 -13 6 737 1053 153 16 11 chr15 19970239 19970424 -83524550 - B2_Mm2 SINE B2 -9 186 1 6 737 1296 81 0 0 chr15 19970486 19970659 -83524315 + BGLII LTR ERVK 1 173 -248 6 737 2129 54 26 45 chr15 19970681 19970990 -83523984 - IAPLTR2b LTR ERVK -24 303 1 6 737 1600 85 22 75 chr15 19970990 19971258 -83523716 + BGLII LTR ERVK 168 421 0 6 737 812 117 78 0 chr15 19971259 19971387 -83523587 - B2_Mm2 SINE B2 -45 150 13 6 737 485 259 77 63 chr15 19971387 19971750 -83523224 - L1_Mur3 LINE L1 -2953 2927 2560 6 737 1519 67 0 0 chr15 19971754 19971947 -83523027 - B2_Mm1t SINE B2 0 193 1 6 737 1092 91 0 0 chr15 19972764 19972918 -83522056 + (TA)n Simple_repeat Simple_repeat 2 155 0 6 737 1932 154 3 61 chr15 19973446 19973791 -83521183 - ORR1A2 LTR MaLR -2 325 1 6 737 322 314 32 75 chr15 19974014 19974200 -83520774 - Lx9 LINE L1 -451 7193 7016 6 737 211 293 0 13 chr15 19974256 19974332 -83520642 + (CA)n Simple_repeat Simple_repeat 2 76 0 6 737 217 185 0 30 chr15 19974344 19974411 -83520563 + (CATATA)n Simple_repeat Simple_repeat 6 70 0 6 737 243 114 0 0 chr15 19975475 19975510 -83519464 + L1VL1 LINE L1 172 206 -6216 6 737 23016 90 5 69 chr15 19975507 19979315 -83515659 + L1_Mm LINE L1 1788 5246 -640 6 737 215 31 31 0 chr15 19979315 19979347 -83515627 + (TA)n Simple_repeat Simple_repeat 2 34 0 6 737 17286 179 7 99 chr15 19979347 19979721 -83515253 + L1_Mm LINE L1 5247 5588 -298 6 737 7515 69 3 7 chr15 19979722 19980720 -83514254 + L1Md_F2 LINE L1 5587 6580 -2 6 737 275 303 88 34 chr15 19980785 19980932 -83514042 - Lx9 LINE L1 -324 7320 7166 6 737 5920 203 34 55 chr15 19981228 19982366 -83512608 - Lx5 LINE L1 -610 6440 5286 6 737 207 0 0 0 chr15 19982366 19982389 -83512585 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6 737 2295 142 5 3 chr15 19982394 19982776 -83512198 - Lx LINE L1 -7 6647 6265 6 737 5920 201 26 77 chr15 19982776 19983423 -83511551 - Lx5 LINE L1 -595 5282 4683 6 737 756 204 0 17 chr15 19983423 19983598 -83511376 - Lx3A LINE L1 -3 6978 6807 6 737 5920 201 26 77 chr15 19983598 19983934 -83511040 - Lx5 LINE L1 -1195 4682 4383 6 737 2415 25 0 0 chr15 19983934 19984215 -83510759 + L1Md_F3 LINE L1 6290 6570 -14 6 737 5920 201 26 77 chr15 19984215 19984262 -83510712 - Lx5 LINE L1 -1495 4382 4336 6 737 1707 254 135 23 chr15 19984260 19984780 -83510194 + Lx5 LINE L1 6473 7050 0 6 737 268 151 19 0 chr15 19984788 19984841 -83510133 - Lx7 LINE L1 -8 7688 7635 6 737 866 317 92 24 chr15 19984890 19985316 -83509658 - Lx9 LINE L1 -654 6990 6536 6 737 323 222 101 36 chr15 19985364 19985428 -83509546 + Lx9 LINE L1 7385 7449 -195 6 737 2949 35 0 3 chr15 19985428 19985775 -83509199 - ORR1A0 LTR MaLR 0 346 1 6 737 323 222 101 36 chr15 19985775 19985878 -83509096 + Lx9 LINE L1 7450 7563 -81 6 737 248 175 24 24 chr15 19985901 19985983 -83508991 + (TTA)n Simple_repeat Simple_repeat 3 84 0 6 737 32 43 0 0 chr15 19986025 19986071 -83508903 + AT_rich Low_complexity Low_complexity 1 46 0 6 737 305 346 81 38 chr15 19987753 19987939 -83507035 + HAL1-3A_ME LINE L1 2277 2470 -388 6 737 24 77 0 0 chr15 19988084 19988136 -83506838 + AT_rich Low_complexity Low_complexity 1 52 0 6 737 23 68 0 0 chr15 19988960 19989004 -83505970 + AT_rich Low_complexity Low_complexity 1 44 0 6 737 3601 101 0 59 chr15 19989121 19989677 -83505297 - L1_Mus2 LINE L1 -1 6565 6043 6 737 34812 46 1 3 chr15 19989866 19994947 -83500027 + L1Md_Gf LINE L1 422 5589 -297 6 737 8993 3 0 0 chr15 19994947 19995943 -83499031 + L1Md_A LINE L1 5587 6582 0 6 737 204 40 0 0 chr15 19996116 19996141 -83498833 + (A)n Simple_repeat Simple_repeat 1 25 0 6 737 2786 22 0 0 chr15 19996141 19996461 -83498513 + L1Md_T LINE L1 5267 5586 -297 6 737 8426 34 0 0 chr15 19996461 19997456 -83497518 + L1Md_T LINE L1 5587 6581 -1 6 737 244 373 36 0 chr15 19998178 19998288 -83496686 - Lx8 LINE L1 -398 7075 6962 6 737 3347 38 2 0 chr15 19998457 19998852 -83496122 - MTA_Mm LTR MaLR 0 396 1 6 737 189 121 0 0 chr15 19999089 19999122 -83495852 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 6 737 746 332 5 9 chr15 19999319 19999529 -83495445 + MTD LTR MaLR 1 209 -210 6 737 1349 246 39 3 chr15 19999621 19999998 -83494976 + Lx5 LINE L1 6635 7019 -39 7 737 359 83 17 0 chr15 20000023 20000083 -83494891 + (TAAA)n Simple_repeat Simple_repeat 2 62 0 1 737 1046 103 90 12 chr15 20001433 20001600 -83493374 + B2_Mm2 SINE B2 2 181 -14 2 737 305 320 55 23 chr15 20002253 20002381 -83492593 - B1F SINE Alu 0 149 18 3 737 477 0 0 0 chr15 20002480 20002533 -83492441 + (GA)n Simple_repeat Simple_repeat 2 54 0 4 737 6901 171 19 32 chr15 20002899 20004837 -83490137 - Lx3C LINE L1 -7 6969 5054 5 737 579 318 11 17 chr15 20006452 20006628 -83488346 + B3 SINE B2 8 182 -34 6 737 22 35 0 0 chr15 20006836 20006865 -83488109 + AT_rich Low_complexity Low_complexity 1 29 0 7 737 228 67 0 0 chr15 20007738 20007768 -83487206 + (TTA)n Simple_repeat Simple_repeat 1 30 0 8 737 489 33 0 0 chr15 20007922 20007977 -83486997 + (TA)n Simple_repeat Simple_repeat 2 56 0 9 737 594 63 0 0 chr15 20007977 20008056 -83486918 + (CA)n Simple_repeat Simple_repeat 2 80 0 1 737 1111 57 14 0 chr15 20008130 20008270 -83486704 - B1_Mus1 SINE Alu -6 142 1 1 737 432 0 0 0 chr15 20008323 20008371 -83486603 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 737 628 278 69 8 chr15 20008461 20008708 -83486266 + Lx9 LINE L1 7192 7453 -191 1 737 318 106 0 0 chr15 20008719 20008766 -83486208 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 1 737 269 243 29 10 chr15 20008774 20008864 -83486110 + Lx9 LINE L1 7538 7630 -14 1 737 4375 79 5 3 chr15 20008864 20009473 -83485501 + L1Md_F2 LINE L1 5973 6582 0 1 737 269 243 29 10 chr15 20009473 20009486 -83485488 + Lx9 LINE L1 7631 7643 -1 1 737 1378 275 16 30 chr15 20009679 20010106 -83484868 + MTC LTR MaLR 1 421 0 1 737 457 301 63 14 chr15 20010116 20010338 -83484636 - MER67C LTR ERV1 -478 233 1 1 737 315 212 12 0 chr15 20010379 20010459 -83484515 + CT-rich Low_complexity Low_complexity 2 82 0 1 737 886 128 0 16 chr15 20010499 20010682 -83484292 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 737 3451 170 22 9 chr15 20011000 20011646 -83483328 + Lx2B LINE L1 6343 6996 -4 2 737 332 92 0 30 chr15 20011696 20011763 -83483211 + (TCTCTG)n Simple_repeat Simple_repeat 4 68 0 2 737 814 101 7 7 chr15 20011811 20011951 -83483023 - Lx LINE L1 0 6654 6515 2 737 186 43 0 0 chr15 20012026 20012049 -83482925 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2 737 22 80 0 0 chr15 20012187 20012237 -83482737 + AT_rich Low_complexity Low_complexity 1 50 0 2 737 27 0 0 0 chr15 20012527 20012554 -83482420 + AT_rich Low_complexity Low_complexity 1 27 0 2 737 336 422 26 38 chr15 20012814 20013080 -83481894 + B4A SINE B4 8 270 -22 2 737 337 332 75 9 chr15 20013754 20013967 -83481007 - Lx8 LINE L1 -657 6816 6590 2 737 1042 95 0 26 chr15 20015608 20015760 -83479214 - B1_Mus1 SINE Alu 0 148 1 2 737 294 180 0 0 chr15 20015982 20016043 -83478931 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 737 269 296 45 0 chr15 20016138 20016226 -83478748 - L1M2 LINE L1 -1332 4811 4720 3 737 262 300 70 49 chr15 20016317 20016674 -83478300 + L1M2 LINE L1 5148 5519 -781 3 737 360 64 0 0 chr15 20016688 20016735 -83478239 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 737 615 200 0 7 chr15 20018792 20018928 -83476046 + Lx2B LINE L1 6863 6997 -3 3 737 226 265 0 14 chr15 20020873 20020942 -83474032 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 737 811 342 53 23 chr15 20021034 20021916 -83473058 - L1MC1 LINE L1 -31 6302 5380 3 737 664 126 0 0 chr15 20022019 20022114 -83472860 - L1_Mus4 LINE L1 -412 6224 6130 3 737 315 352 19 34 chr15 20022476 20022682 -83472292 - MTE-int LTR MaLR -1306 274 72 3 737 1483 234 56 63 chr15 20023494 20023890 -83471084 + MTC LTR MaLR 1 393 -28 3 737 474 269 74 28 chr15 20024129 20024408 -83470566 - RMER6D LTR ERVK -8 712 521 3 737 649 161 0 25 chr15 20024412 20024533 -83470441 + RMER6-int LTR ERVK 7 124 -3053 4 737 1377 209 4 0 chr15 20024530 20024803 -83470171 + RMER6-int LTR ERVK 956 1229 -1948 4 737 4754 100 9 0 chr15 20024824 20025503 -83469471 + L1_Mus3 LINE L1 5947 6631 -7 4 737 1893 175 148 10 chr15 20025506 20025898 -83469076 + RMER6-int LTR ERVK 1315 1760 -1417 4 737 693 281 51 54 chr15 20025883 20026075 -83468899 + MurERV4-int LTR ERVK 4691 4888 -372 4 737 2748 64 2 106 chr15 20026075 20026510 -83468464 + RLTR10 LTR ERVK 1 390 0 4 737 693 281 51 54 chr15 20026510 20026633 -83468341 + MurERV4-int LTR ERVK 4889 5005 -255 4 737 550 172 0 0 chr15 20026637 20026724 -83468250 + RMER6-int LTR ERVK 2744 2830 -347 4 737 2970 187 82 19 chr15 20026941 20027574 -83467400 + RLTR33 LTR ERVK 5 677 -1 4 737 1612 180 45 6 chr15 20027574 20027904 -83467070 + RMER6-int LTR ERVK 2825 3167 -10 4 737 512 171 171 0 chr15 20027911 20028016 -83466958 + RMER6D LTR ERVK 21 143 -577 4 737 3029 175 127 14 chr15 20028037 20028685 -83466289 - Lx4A LINE L1 -3 7055 6335 4 737 624 195 0 8 chr15 20028687 20028811 -83466163 + Lx4A LINE L1 5336 5458 -419 4 737 3775 12 0 0 chr15 20028810 20029240 -83465734 - L1_Mm LINE L1 -304 5579 5150 4 737 2754 128 9 2 chr15 20029240 20029663 -83465311 + Lx4A LINE L1 5452 5877 0 4 737 1660 215 17 8 chr15 20029695 20030052 -83464922 + Lx4A LINE L1 5992 6351 -707 4 737 2762 195 92 31 chr15 20030052 20030723 -83464251 + RMER6D LTR ERVK 1 712 -8 4 737 282 318 54 36 chr15 20031161 20031272 -83463702 - MLT1A0 LTR MaLR -252 113 1 4 737 22 35 0 0 chr15 20031370 20031399 -83463575 + AT_rich Low_complexity Low_complexity 1 29 0 5 737 1220 307 16 11 chr15 20031546 20031921 -83463053 - Lx6 LINE L1 -947 6513 6137 5 737 420 20 0 0 chr15 20032301 20032350 -83462624 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 737 1239 326 12 22 chr15 20032366 20032771 -83462203 + Lx6 LINE L1 7001 7401 -59 5 737 34 0 0 0 chr15 20032799 20032833 -83462141 + AT_rich Low_complexity Low_complexity 1 34 0 5 737 429 292 92 35 chr15 20032833 20033273 -83461701 - L1M2 LINE L1 -1052 4828 4371 5 737 1238 217 31 16 chr15 20033282 20033600 -83461374 - RMER1C Other Other -1 1341 1019 5 737 7336 72 14 1 chr15 20033734 20035127 -83459847 - L1Md_F2 LINE L1 -3 6579 5170 5 737 27 0 0 0 chr15 20035437 20035464 -83459510 + AT_rich Low_complexity Low_complexity 1 27 0 5 737 1468 234 83 26 chr15 20035479 20036075 -83458899 - RMER6A LTR ERVK -131 625 2 5 737 867 272 37 37 chr15 20036140 20036468 -83458506 + RLTR15 LTR ERVK 14 341 -18 6 737 26 0 0 0 chr15 20036525 20036551 -83458423 + AT_rich Low_complexity Low_complexity 1 26 0 6 737 516 350 24 103 chr15 20037163 20037660 -83457314 - Lx8 LINE L1 -82 7391 6934 6 737 1666 26 0 0 chr15 20037679 20037872 -83457102 - B2_Mm1t SINE B2 0 193 1 6 737 208 72 47 23 chr15 20038149 20038192 -83456782 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 6 737 441 0 0 0 chr15 20038279 20038328 -83456646 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 737 184 306 41 0 chr15 20038508 20038557 -83456417 - MIRb SINE MIR -23 245 195 6 737 619 234 0 0 chr15 20038963 20039091 -83455883 + B3 SINE B2 2 129 -87 6 737 26 0 0 0 chr15 20039138 20039164 -83455810 + AT_rich Low_complexity Low_complexity 1 26 0 6 737 35 71 0 0 chr15 20039185 20039255 -83455719 + AT_rich Low_complexity Low_complexity 1 70 0 6 737 298 373 77 32 chr15 20039444 20039599 -83455375 - RSINE1 SINE B4 0 165 4 7 737 416 35 0 17 chr15 20039950 20040009 -83454965 + (TA)n Simple_repeat Simple_repeat 2 59 0 7 737 543 306 38 85 chr15 20041375 20041717 -83453257 + Lx8 LINE L1 6641 6978 -495 7 737 25 31 0 0 chr15 20041746 20041778 -83453196 + AT_rich Low_complexity Low_complexity 1 32 0 7 737 186 24 70 47 chr15 20041807 20041850 -83453124 + (TTATA)n Simple_repeat Simple_repeat 1 44 0 7 737 2025 277 73 68 chr15 20042050 20042615 -83452359 + RLTR40 LTR ERVK 5 590 -227 7 737 216 97 0 0 chr15 20042615 20042646 -83452328 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 737 2025 277 73 68 chr15 20042646 20042883 -83452091 + RLTR40 LTR ERVK 591 811 -6 7 737 298 319 30 24 chr15 20043606 20043770 -83451204 - MER34A1 LTR ERV1 -73 514 350 7 737 312 342 18 55 chr15 20043773 20043937 -83451037 + Lx8 LINE L1 7070 7227 -246 7 737 2280 187 14 5 chr15 20044105 20044545 -83450429 + Lx4A LINE L1 6615 7058 0 7 737 39 38 0 0 chr15 20044545 20044598 -83450376 + AT_rich Low_complexity Low_complexity 1 53 0 7 737 24 91 0 0 chr15 20044672 20044738 -83450236 + AT_rich Low_complexity Low_complexity 1 66 0 8 737 3708 112 125 16 chr15 20045158 20045774 -83449200 - Lx LINE L1 0 6654 5972 8 737 1463 185 95 50 chr15 20045898 20046257 -83448717 + ORR1C1 LTR MaLR 3 377 -1 8 737 1491 47 0 5 chr15 20047706 20047897 -83447077 + MTA_Mm LTR MaLR 207 396 0 8 737 328 363 70 40 chr15 20048072 20048273 -83446701 + B4A SINE B4 1 207 -85 8 737 22 0 0 0 chr15 20048382 20048404 -83446570 + AT_rich Low_complexity Low_complexity 1 22 0 8 737 326 200 0 0 chr15 20048437 20048497 -83446477 - Lx LINE L1 -174 6480 6421 8 737 501 17 0 0 chr15 20051078 20051136 -83443838 + (TA)n Simple_repeat Simple_repeat 2 59 0 8 737 533 147 0 0 chr15 20051312 20051414 -83443560 - L1_Mus1 LINE L1 -1 6566 6465 8 737 1707 10 0 0 chr15 20051414 20051614 -83443360 + ORR1A0 LTR MaLR 147 346 0 8 737 1006 57 50 0 chr15 20052883 20053023 -83441951 + B1_Mus1 SINE Alu 2 148 0 9 737 471 113 0 0 chr15 20053023 20053094 -83441880 + (A)n Simple_repeat Simple_repeat 1 71 0 9 738 208 254 0 0 chr15 20054032 20054087 -83440887 + (TA)n Simple_repeat Simple_repeat 1 55 0 9 738 400 299 24 28 chr15 20056048 20056261 -83438713 + L1MC3 LINE L1 7497 7708 -77 9 738 2190 273 39 57 chr15 20057059 20057749 -83437225 - Lx6 LINE L1 -2 7458 6781 9 738 726 53 0 0 chr15 20057759 20057854 -83437120 + (CA)n Simple_repeat Simple_repeat 2 96 0 9 738 3561 250 85 32 chr15 20057931 20059442 -83435532 - Lx6 LINE L1 -1525 6171 4574 9 738 391 309 36 7 chr15 20060843 20060983 -83433991 + MLT1A0 LTR MaLR 9 152 -213 9 738 31 44 0 0 chr15 20061219 20061264 -83433710 + AT_rich Low_complexity Low_complexity 1 45 0 9 738 501 151 29 24 chr15 20061414 20061584 -83433390 + (TA)n Simple_repeat Simple_repeat 2 172 0 9 738 648 0 0 0 chr15 20062377 20062449 -83432525 + (TC)n Simple_repeat Simple_repeat 1 72 0 9 738 519 17 0 0 chr15 20063749 20063809 -83431165 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 738 204 125 0 0 chr15 20064072 20064104 -83430870 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 738 337 345 17 34 chr15 20064112 20064229 -83430745 - RSINE1 SINE B4 -43 122 8 1 738 211 220 0 0 chr15 20064866 20064916 -83430058 + T-rich Low_complexity Low_complexity 1 50 0 1 738 275 359 35 12 chr15 20064919 20065091 -83429883 - Charlie24 DNA MER1_type -1413 1037 862 1 738 22 56 0 0 chr15 20067174 20067210 -83427764 + AT_rich Low_complexity Low_complexity 1 36 0 1 738 519 29 0 0 chr15 20067354 20067422 -83427552 + L1Md_T LINE L1 6515 6582 0 1 738 386 178 11 0 chr15 20067831 20067921 -83427053 + (TAAA)n Simple_repeat Simple_repeat 2 92 0 1 738 410 218 9 0 chr15 20068268 20068378 -83426596 + (TA)n Simple_repeat Simple_repeat 2 112 0 1 738 229 342 81 24 chr15 20069686 20069809 -83425165 - MLT1A LTR MaLR -13 361 232 1 738 377 349 36 32 chr15 20070402 20070621 -83424353 + Lx7 LINE L1 6612 6831 -865 1 738 27 29 0 0 chr15 20071417 20071451 -83423523 + AT_rich Low_complexity Low_complexity 1 34 0 1 738 27 49 0 0 chr15 20072885 20072926 -83422048 + AT_rich Low_complexity Low_complexity 1 41 0 1 738 307 410 14 0 chr15 20072943 20073087 -83421887 - RSINE1 SINE B4 -7 158 13 1 738 289 388 41 32 chr15 20073133 20073354 -83421620 + MTE2a LTR MaLR 1 223 -156 1 738 23 54 0 0 chr15 20073743 20073780 -83421194 + AT_rich Low_complexity Low_complexity 1 37 0 1 738 8223 171 37 6 chr15 20073975 20074004 -83420970 - L1_Mur2 LINE L1 -661 5216 5193 1 738 3256 51 2 0 chr15 20074004 20074399 -83420575 + MTA_Mm LTR MaLR 1 396 0 1 738 8138 67 12 3 chr15 20074399 20075487 -83419487 + MTA_Mm-int LTR MaLR 1 1098 0 1 738 3028 76 2 0 chr15 20075487 20075882 -83419092 + MTA_Mm LTR MaLR 1 396 0 1 738 8223 171 37 6 chr15 20075882 20077442 -83417532 - L1_Mur2 LINE L1 -685 5192 3577 1 738 1009 249 0 4 chr15 20077674 20077924 -83417050 + L1_Mur2 LINE L1 3405 3653 -2224 1 738 1389 217 39 33 chr15 20077927 20078261 -83416713 + Lx3C LINE L1 6636 6971 -5 1 738 1982 214 20 7 chr15 20078279 20078726 -83416248 + L1_Mur2 LINE L1 3657 4109 -1768 1 738 536 133 0 26 chr15 20078739 20078855 -83416119 - L1_Mus4 LINE L1 -7 6629 6517 1 738 548 110 50 0 chr15 20078884 20078984 -83415990 + L1_Mus4 LINE L1 6519 6623 -13 1 738 330 292 72 72 chr15 20079010 20079331 -83415643 + L1_Mur2 LINE L1 4423 4743 -1137 1 738 277 354 17 26 chr15 20079402 20079518 -83415456 - RMER15 LTR ERVL -14 561 447 1 738 273 347 25 8 chr15 20079615 20079737 -83415237 - Lx LINE L1 -301 7172 7049 1 738 209 183 17 0 chr15 20080708 20080768 -83414206 + (TAA)n Simple_repeat Simple_repeat 2 62 0 1 738 207 137 41 0 chr15 20080800 20080873 -83414101 + T-rich Low_complexity Low_complexity 1 76 0 1 738 338 232 116 89 chr15 20080972 20081343 -83413631 + Lx9 LINE L1 7203 7637 -7 1 738 3623 117 5 4 chr15 20082664 20083209 -83411765 - Lx LINE L1 -551 6499 5633 1 738 1499 199 63 6 chr15 20083212 20083531 -83411443 + Lx LINE L1 6316 6652 -2 1 738 375 301 63 31 chr15 20083696 20083823 -83411151 + B3 SINE B2 5 135 -81 1 738 2417 96 127 23 chr15 20084464 20084891 -83410083 - IAPLTR2_Mm LTR ERVK 0 475 5 1 738 26138 18 4 0 chr15 20084895 20087841 -83407133 - IAPEz-int LTR ERVK 0 6481 3525 1 738 932 73 24 0 chr15 20087841 20087964 -83407010 - IAPEz-int LTR ERVK -2770 4910 4785 1 738 1800 123 4 4 chr15 20087961 20088223 -83406751 - IAPEz-int LTR ERVK -5183 2497 2236 1 738 433 82 0 32 chr15 20088212 20088275 -83406699 - IAPEz-int LTR ERVK -5062 1419 1359 1 738 3423 66 6 43 chr15 20088275 20089112 -83405862 - IAPEz-int LTR ERVK -5819 662 8 1 738 2423 99 121 19 chr15 20089112 20089543 -83405431 - IAPLTR2_Mm LTR ERVK 0 475 1 1 738 375 105 0 0 chr15 20089565 20089622 -83405352 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 738 299 292 16 62 chr15 20090207 20090335 -83404639 - Lx5 LINE L1 -1 7049 6928 1 738 264 269 93 43 chr15 20090336 20090409 -83404565 - RMER12 LTR ERVK -474 848 766 1 738 1114 51 13 0 chr15 20090409 20090567 -83404407 + (CA)n Simple_repeat Simple_repeat 1 160 0 1 738 264 269 93 43 chr15 20090567 20090633 -83404341 - RMER12 LTR ERVK -557 765 703 1 738 696 190 0 0 chr15 20090622 20090743 -83404231 - B1_Mur3 SINE Alu 0 149 29 1 738 328 167 0 0 chr15 20090849 20090903 -83404071 + MTC LTR MaLR 1 54 -367 1 738 1480 241 15 18 chr15 20090904 20091237 -83403737 - Lx5 LINE L1 -169 6881 6550 1 738 710 184 0 0 chr15 20091237 20091378 -83403596 + Lx LINE L1 6508 6648 -6 1 738 3053 199 49 27 chr15 20091482 20092116 -83402858 - Lx5 LINE L1 -493 6557 5910 1 738 21 0 0 0 chr15 20092364 20092385 -83402589 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 297 118 0 0 chr15 20093042 20093093 -83401881 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 738 486 0 0 0 chr15 20093361 20093415 -83401559 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 738 232 290 0 75 chr15 20096208 20096275 -83398699 + RSINE1 SINE B4 68 129 -36 1 738 588 29 0 0 chr15 20096290 20096360 -83398614 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 738 291 28 0 0 chr15 20096360 20096395 -83398579 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 738 253 371 50 17 chr15 20096461 20096642 -83398332 + ERVL-E-int LTR ERVL 1968 2154 -3513 1 738 348 345 111 35 chr15 20096841 20097039 -83397935 - B3A SINE B2 -1 215 3 1 738 309 289 0 66 chr15 20097045 20097167 -83397807 + ERVL-int LTR ERVL 4854 4967 -790 1 738 418 268 184 39 chr15 20097569 20097855 -83397119 + Lx5 LINE L1 6001 6348 -702 1 738 936 322 110 18 chr15 20097850 20098374 -83396600 + Lx5 LINE L1 6464 7404 -56 1 738 37863 45 3 14 chr15 20098382 20104485 -83390489 - L1Md_A LINE L1 -1 6581 554 1 738 660 160 0 0 chr15 20104676 20104795 -83390179 + (TA)n Simple_repeat Simple_repeat 1 119 0 1 738 514 301 76 6 chr15 20105029 20105186 -83389788 + B3 SINE B2 33 200 -16 1 738 22 0 0 0 chr15 20105196 20105218 -83389756 + AT_rich Low_complexity Low_complexity 1 22 0 1 738 2032 234 32 140 chr15 20106442 20107101 -83387873 + RMER19C LTR ERVK 24 611 0 1 738 1665 283 86 42 chr15 20107879 20108568 -83386406 - Lx6 LINE L1 -2 7458 6740 1 738 306 0 0 0 chr15 20108593 20108627 -83386347 + (T)n Simple_repeat Simple_repeat 1 34 0 1 738 23 33 0 0 chr15 20109267 20109297 -83385677 + AT_rich Low_complexity Low_complexity 1 30 0 1 738 2930 152 0 2 chr15 20109521 20109996 -83384978 + Lx2 LINE L1 6524 6997 0 1 738 243 0 0 0 chr15 20110785 20110812 -83384162 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 738 258 328 15 0 chr15 20110820 20110887 -83384087 - ID_B1 SINE B4 -70 154 87 1 738 303 382 7 13 chr15 20112995 20113149 -83381825 + MER77 LTR ERVL 446 598 -9 1 738 258 394 70 81 chr15 20112997 20113342 -83381632 + MER21B LTR ERV1 408 748 -115 1 738 1209 264 65 3 chr15 20113979 20114317 -83380657 - ORR1D1 LTR MaLR -7 367 9 1 738 689 358 24 27 chr15 20114969 20115122 -83379852 + RMER1A Other Other 105 258 -772 1 738 3012 124 106 17 chr15 20115122 20115640 -83379334 + LTRIS2 LTR ERV1 1 564 0 1 738 1361 277 25 51 chr15 20115640 20116179 -83378795 + RMER1B Other Other 259 930 -136 1 738 347 241 51 17 chr15 20116563 20116681 -83378293 - Lx7 LINE L1 -786 6910 6789 1 738 40 67 0 0 chr15 20117791 20117866 -83377108 + AT_rich Low_complexity Low_complexity 1 75 0 1 738 21 0 0 0 chr15 20118254 20118275 -83376699 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 4528 101 12 40 chr15 20119118 20119459 -83375515 - L1_Mur1 LINE L1 -280 5606 5277 1 738 456 19 0 0 chr15 20119459 20119512 -83375462 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 738 4528 101 12 40 chr15 20119512 20119763 -83375211 - L1_Mur1 LINE L1 -610 5276 5033 1 738 2308 119 143 9 chr15 20119763 20120188 -83374786 + RLTR45 LTR ERVK 1 482 0 1 738 4528 101 12 40 chr15 20120188 20120327 -83374647 - L1_Mur1 LINE L1 -854 5032 4894 1 738 234 0 0 0 chr15 20120329 20120355 -83374619 + (T)n Simple_repeat Simple_repeat 1 26 0 1 738 349 204 22 14 chr15 20121073 20121212 -83373762 + (TA)n Simple_repeat Simple_repeat 1 140 0 1 738 22 0 0 0 chr15 20121404 20121426 -83373548 + AT_rich Low_complexity Low_complexity 1 22 0 1 738 3699 163 48 27 chr15 20122205 20122918 -83372056 - Lx3C LINE L1 -2 6974 6247 1 738 4788 159 21 63 chr15 20122940 20123960 -83371014 - Lx2 LINE L1 0 6997 6021 1 738 1101 16 0 0 chr15 20123993 20124120 -83370854 + (GA)n Simple_repeat Simple_repeat 2 128 0 1 738 180 0 0 0 chr15 20124183 20124203 -83370771 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1 738 29 47 0 0 chr15 20125116 20125159 -83369815 + AT_rich Low_complexity Low_complexity 1 43 0 1 738 239 291 288 11 chr15 20125275 20125466 -83369508 - RMER5 LTR ERV1 -1 533 290 1 738 1358 93 5 0 chr15 20125469 20125674 -83369300 + L1_Mur1 LINE L1 3306 3511 -2375 1 738 6313 101 30 25 chr15 20125678 20126018 -83368956 + L1_Mur1 LINE L1 4374 4732 -1154 1 738 2292 87 25 31 chr15 20126018 20126375 -83368599 + L1_Mus2 LINE L1 6211 6565 -1 1 738 6313 101 30 25 chr15 20126375 20127018 -83367956 + L1_Mur1 LINE L1 4733 5361 -525 1 738 269 300 26 26 chr15 20127313 20127426 -83367548 + RLTR8 LTR ERVK 253 365 0 1 738 7034 132 22 87 chr15 20127426 20129192 -83365782 + Lx3A LINE L1 5357 6977 -4 1 738 387 322 102 40 chr15 20129256 20129482 -83365492 - RMER5 LTR ERV1 -262 272 33 1 738 273 135 0 0 chr15 20129545 20129597 -83365377 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 738 531 0 0 0 chr15 20129614 20129673 -83365301 + (TTTC)n Simple_repeat Simple_repeat 4 62 0 1 738 378 286 125 16 chr15 20129924 20130180 -83364794 - L1M5 LINE L1 -340 5822 5539 1 738 747 258 59 33 chr15 20130657 20130962 -83364012 - Lx7 LINE L1 -29 7667 7355 1 738 486 91 0 0 chr15 20130979 20131056 -83363918 + (GA)n Simple_repeat Simple_repeat 2 78 0 1 738 973 250 49 11 chr15 20131068 20131335 -83363639 - Lx7 LINE L1 -365 7331 7055 1 738 1020 288 55 0 chr15 20131322 20131631 -83363343 - Lx7 LINE L1 -1151 6545 6220 1 738 2816 211 43 22 chr15 20131667 20132296 -83362678 + RLTR26 LTR ERVK 1 642 0 1 738 1972 133 37 3 chr15 20132296 20132619 -83362355 - Lx3B LINE L1 -104 6869 6536 1 738 4169 219 79 48 chr15 20132609 20134041 -83360933 - L1_Mur3 LINE L1 -2229 3651 2176 1 738 370 82 25 76 chr15 20134050 20134129 -83360845 - L1_Mus3 LINE L1 0 6566 6492 1 738 614 88 0 0 chr15 20134129 20134209 -83360765 - L1_Mus3 LINE L1 -197 6441 6362 1 738 3003 70 0 0 chr15 20134223 20134610 -83360364 - L1Md_A LINE L1 -2 6580 6194 1 738 29 70 0 0 chr15 20134997 20135054 -83359920 + AT_rich Low_complexity Low_complexity 1 57 0 1 738 555 298 87 8 chr15 20135142 20135327 -83359647 + B3 SINE B2 1 193 -5 1 738 22 0 0 0 chr15 20135362 20135384 -83359590 + AT_rich Low_complexity Low_complexity 1 22 0 1 738 22 0 0 0 chr15 20135508 20135530 -83359444 + AT_rich Low_complexity Low_complexity 1 22 0 1 738 251 250 212 0 chr15 20135967 20136000 -83358974 - B1_Mur1 SINE Alu -40 109 70 1 738 198 0 0 0 chr15 20136000 20136022 -83358952 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1 738 251 250 212 0 chr15 20136022 20136068 -83358906 - B1_Mur1 SINE Alu -80 69 14 1 738 233 346 35 62 chr15 20136173 20136318 -83358656 + L2 LINE L2 998 1138 -2281 1 738 303 141 0 0 chr15 20136797 20136861 -83358113 + (T)n Simple_repeat Simple_repeat 1 64 0 2 738 1018 80 0 0 chr15 20136861 20136998 -83357976 - B1_Mm SINE Alu 0 147 11 2 738 394 250 7 126 chr15 20136896 20137047 -83357927 - MT2B LTR ERVL -337 264 132 2 738 267 311 147 41 chr15 20137124 20137342 -83357632 + L2 LINE L2 2084 2324 -1095 1 738 265 408 113 20 chr15 20137379 20137734 -83357240 + L2 LINE L2 2657 3044 -375 1 738 23 33 0 0 chr15 20138092 20138122 -83356852 + AT_rich Low_complexity Low_complexity 1 30 0 2 738 442 283 28 28 chr15 20138123 20138265 -83356709 - Lx9 LINE L1 -678 6966 6825 2 738 348 245 54 9 chr15 20138265 20138376 -83356598 + Lx9 LINE L1 6976 7091 -553 2 738 4234 117 1 5 chr15 20139123 20139784 -83355190 - L1_Mur1 LINE L1 -1908 3978 3320 2 738 3322 143 68 7 chr15 20139783 20140360 -83354614 + Lx3B LINE L1 6303 6914 -59 2 738 22 0 0 0 chr15 20140761 20140783 -83354191 + AT_rich Low_complexity Low_complexity 1 22 0 2 738 5384 174 85 12 chr15 20140994 20142061 -83352913 + Lx2B LINE L1 5846 6990 -10 2 738 1450 52 0 0 chr15 20142305 20142479 -83352495 + L1Md_F2 LINE L1 5413 5586 -297 2 738 7960 55 1 0 chr15 20142480 20143471 -83351503 + L1Md_F2 LINE L1 5588 6579 -3 2 738 376 369 63 36 chr15 20143664 20143917 -83351057 + B4A SINE B4 28 287 -5 2 738 558 0 0 0 chr15 20143959 20144021 -83350953 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 738 534 43 0 0 chr15 20144021 20144089 -83350885 + (GA)n Simple_repeat Simple_repeat 1 69 0 2 738 888 160 6 0 chr15 20144176 20144351 -83350623 + Lx2 LINE L1 6821 6996 -1 2 738 500 111 0 12 chr15 20144379 20144461 -83350513 + (GAAAA)n Simple_repeat Simple_repeat 5 85 0 2 738 1180 48 7 0 chr15 20144572 20144718 -83350256 + B1_Mus1 SINE Alu 2 148 0 2 738 216 91 68 0 chr15 20144718 20144762 -83350212 + (CAAA)n Simple_repeat Simple_repeat 1 47 0 2 738 319 55 0 85 chr15 20145726 20145785 -83349189 - B1_Mus2 SINE Alu 0 147 94 2 738 183 42 0 0 chr15 20145909 20145933 -83349041 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 738 192 97 0 0 chr15 20146143 20146174 -83348800 + (TATAA)n Simple_repeat Simple_repeat 4 34 0 2 738 342 0 0 0 chr15 20146614 20146652 -83348322 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 738 989 259 183 14 chr15 20146661 20147076 -83347898 + Lx9 LINE L1 7152 7636 -8 2 738 37 23 0 0 chr15 20147319 20147363 -83347611 + AT_rich Low_complexity Low_complexity 1 44 0 2 738 281 371 43 7 chr15 20147770 20147911 -83347063 - B1F1 SINE Alu -3 146 1 2 738 529 350 16 27 chr15 20147911 20147977 -83346997 - ID SINE ID -144 80 17 2 738 360 0 0 0 chr15 20147982 20148022 -83346952 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 738 512 338 35 56 chr15 20148093 20148325 -83346649 - B4 SINE B4 -65 227 1 2 738 5726 133 40 1 chr15 20148481 20149407 -83345567 - Lx LINE L1 -1 6653 5702 2 738 268 345 23 0 chr15 20149411 20149498 -83345476 + RSINE1 SINE B4 15 103 -62 2 738 1273 57 11 0 chr15 20149687 20149862 -83345112 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 2 738 445 325 37 12 chr15 20149985 20150147 -83344827 - B3 SINE B2 -10 206 41 2 738 375 23 0 0 chr15 20150506 20150550 -83344424 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 738 348 24 0 0 chr15 20150552 20150593 -83344381 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 738 2353 89 23 11 chr15 20150950 20151303 -83343671 + IAPEY2_LTR LTR ERVK 1 357 0 2 738 206 288 13 143 chr15 20153253 20153330 -83341644 - L3b LINE CR1 -11 471 405 2 738 5989 92 37 6 chr15 20154593 20155454 -83339520 - Lx3_Mus LINE L1 -5 7004 6117 2 738 504 136 0 0 chr15 20155688 20155776 -83339198 + (CA)n Simple_repeat Simple_repeat 2 89 0 2 738 480 303 52 31 chr15 20155875 20156069 -83338905 - Lx6 LINE L1 -60 7400 7203 2 738 24 67 0 0 chr15 20156349 20156394 -83338580 + AT_rich Low_complexity Low_complexity 1 45 0 2 738 182 310 116 39 chr15 20156708 20156889 -83338085 - L2 LINE L2 -2545 874 680 2 738 8564 23 0 2 chr15 20156907 20157946 -83337028 - L1Md_A LINE L1 0 6582 5547 2 738 21 0 0 0 chr15 20158037 20158058 -83336916 + AT_rich Low_complexity Low_complexity 1 21 0 2 738 435 52 0 0 chr15 20161324 20161382 -83333592 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 738 238 374 0 0 chr15 20161469 20161568 -83333406 + Lx9 LINE L1 6435 6533 -1111 2 738 246 174 0 0 chr15 20161937 20161983 -83332991 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 738 189 0 0 0 chr15 20162188 20162209 -83332765 + (TTA)n Simple_repeat Simple_repeat 3 23 0 2 738 437 47 16 0 chr15 20162209 20162273 -83332701 + (TAG)n Simple_repeat Simple_repeat 1 65 0 2 738 2646 157 51 12 chr15 20162291 20162805 -83332169 - Lx3B LINE L1 0 6973 6440 2 738 829 139 27 27 chr15 20162959 20163107 -83331867 + Lx2 LINE L1 5865 6012 -985 2 738 1151 194 9 0 chr15 20163107 20163318 -83331656 + Lx2 LINE L1 6125 6337 -660 2 738 1821 214 8 8 chr15 20163322 20163690 -83331284 - Lx2B LINE L1 -169 6831 6464 2 738 476 32 16 0 chr15 20164733 20164795 -83330179 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 2 738 560 263 12 18 chr15 20164795 20164965 -83330009 - Lx4A LINE L1 -19 7039 6871 2 738 381 251 146 50 chr15 20166193 20166474 -83328500 + Lx7 LINE L1 7271 7578 -118 2 738 4001 238 46 14 chr15 20166465 20167507 -83327467 - Lx2B LINE L1 -33 6967 5893 2 738 273 173 394 0 chr15 20167511 20167615 -83327359 + BGLII_B LTR ERVK 19 163 -278 2 738 422 369 24 11 chr15 20167776 20168005 -83326969 + B4 SINE B4 2 236 -56 2 738 297 0 0 0 chr15 20168048 20168081 -83326893 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 738 24 53 0 0 chr15 20168471 20168509 -83326465 + AT_rich Low_complexity Low_complexity 1 38 0 2 738 259 333 57 72 chr15 20168512 20168611 -83326363 - B3A SINE B2 -6 192 2 2 738 280 297 32 42 chr15 20168611 20168706 -83326268 - B4A SINE B4 -197 95 2 2 738 24 32 0 0 chr15 20168785 20168816 -83326158 + AT_rich Low_complexity Low_complexity 1 31 0 2 738 27 29 0 0 chr15 20169982 20170016 -83324958 + AT_rich Low_complexity Low_complexity 1 34 0 2 738 210 273 11 0 chr15 20170854 20170942 -83324032 + (TCTCTG)n Simple_repeat Simple_repeat 3 91 0 2 738 1168 69 0 0 chr15 20171312 20171457 -83323517 + B1_Mm SINE Alu 3 147 0 2 738 237 33 0 0 chr15 20171457 20171487 -83323487 + (CAAAAA)n Simple_repeat Simple_repeat 6 35 0 2 738 738 286 28 28 chr15 20171682 20171898 -83323076 + B3 SINE B2 1 216 0 2 738 432 0 0 0 chr15 20172017 20172065 -83322909 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 2 738 990 109 0 0 chr15 20172065 20172203 -83322771 - B1_Mus1 SINE Alu -10 138 1 2 738 839 286 125 24 chr15 20172338 20172615 -83322359 + Lx9 LINE L1 7194 7489 -155 2 738 195 42 0 0 chr15 20172615 20172639 -83322335 + (TATATG)n Simple_repeat Simple_repeat 1 24 0 2 738 839 286 125 24 chr15 20172639 20172770 -83322204 + Lx9 LINE L1 7490 7642 -2 2 738 478 358 64 23 chr15 20172944 20173290 -83321684 - Lx8 LINE L1 -694 6779 6420 2 738 521 281 68 13 chr15 20173307 20173541 -83321433 + Lx7 LINE L1 5626 5901 -1795 2 738 405 0 0 0 chr15 20174479 20174524 -83320450 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 738 234 0 0 0 chr15 20174712 20174738 -83320236 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 738 531 108 0 0 chr15 20174738 20174831 -83320143 + (GA)n Simple_repeat Simple_repeat 1 93 0 2 738 4961 127 46 27 chr15 20175628 20176491 -83318483 + Lx3_Mus LINE L1 6122 7001 -8 2 738 500 254 150 11 chr15 20177364 20177551 -83317423 + L1VL4 LINE L1 600 812 -5804 2 738 16462 144 10 11 chr15 20177613 20180178 -83314796 + L1VL4 LINE L1 668 3253 -2630 2 738 1875 96 31 22 chr15 20180178 20180497 -83314477 - RLTRETN_Mm LTR ERVK 0 322 1 2 738 16462 135 12 11 chr15 20180497 20181309 -83313665 + L1VL4 LINE L1 3254 4047 -1836 2 738 4469 133 4 1 chr15 20181309 20181989 -83312985 + L1_Mus3 LINE L1 5949 6630 -8 2 738 238 343 58 19 chr15 20182056 20182160 -83312814 + RSINE1 SINE B4 54 161 -4 2 738 386 303 42 0 chr15 20182165 20182286 -83312688 + B1_Mur1 SINE Alu 15 149 0 2 738 1506 33 22 5 chr15 20182370 20182555 -83312419 - B2_Mm1a SINE B2 -5 188 1 2 738 1262 245 116 0 chr15 20182568 20182939 -83312035 - RMER1B Other Other 0 1066 653 2 738 710 228 33 65 chr15 20182982 20183250 -83311724 + BGLII_B LTR ERVK 1 263 -159 2 738 547 152 63 8 chr15 20183262 20183388 -83311586 + L1_Mur2 LINE L1 5195 5327 -550 2 738 1105 135 0 76 chr15 20183387 20183612 -83311362 - Lx LINE L1 -22 6632 6425 2 738 642 238 7 0 chr15 20183615 20183766 -83311208 + L1_Mur2 LINE L1 5320 5471 -406 2 738 3962 198 46 25 chr15 20183762 20184613 -83310361 + Lx4B LINE L1 6190 7058 0 2 738 206 231 15 0 chr15 20184784 20184849 -83310125 + (TA)n Simple_repeat Simple_repeat 1 66 0 2 739 21 0 0 0 chr15 20185939 20185960 -83309014 + AT_rich Low_complexity Low_complexity 1 21 0 2 739 997 259 54 62 chr15 20185973 20186360 -83308614 - ORR1C2 LTR MaLR 0 384 1 2 739 1639 32 0 0 chr15 20186923 20187112 -83307862 + B2_Mm1a SINE B2 1 189 -4 2 739 2995 97 10 0 chr15 20187414 20187817 -83307157 + MTB_Mm LTR MaLR 1 407 0 2 739 318 312 18 9 chr15 20188340 20188448 -83306526 + MTD LTR MaLR 80 188 -231 2 739 354 315 54 0 chr15 20188448 20188578 -83306396 + MTC-int LTR MaLR 4 140 -1118 2 739 5182 231 57 14 chr15 20188748 20189902 -83305072 - Lx5 LINE L1 -6 7044 5841 2 739 25 0 0 0 chr15 20190117 20190142 -83304832 + AT_rich Low_complexity Low_complexity 1 25 0 2 739 1102 90 0 0 chr15 20190352 20190496 -83304478 + B1_Mm SINE Alu 2 145 -2 2 739 556 285 53 10 chr15 20190558 20190767 -83304207 - Lx6 LINE L1 -1 7459 7242 2 739 709 117 0 38 chr15 20190777 20190910 -83304064 + Lx2 LINE L1 4526 4653 -1230 2 739 4630 193 29 46 chr15 20190903 20192606 -83302368 + Lx2 LINE L1 5136 6844 -153 2 739 270 191 47 113 chr15 20192611 20192717 -83302257 + RLTR9E LTR ERVK 6 104 -264 2 739 481 279 60 36 chr15 20192750 20192917 -83302057 + RLTR9E LTR ERVK 236 406 -3 2 739 432 194 51 0 chr15 20192917 20193015 -83301959 + Lx LINE L1 6492 6594 -60 3 739 1458 119 8 29 chr15 20193085 20193327 -83301647 + L1_Mus3 LINE L1 6395 6631 -7 3 739 429 36 0 0 chr15 20193893 20193948 -83301026 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 3 739 251 209 19 19 chr15 20193976 20194083 -83300891 + (TA)n Simple_repeat Simple_repeat 1 107 0 3 739 343 263 0 71 chr15 20194433 20194560 -83300414 - Lx5 LINE L1 -7 7043 6926 3 739 605 316 45 12 chr15 20194572 20194819 -83300155 + Lx5 LINE L1 5984 6238 -812 3 739 1131 340 72 57 chr15 20196332 20196713 -83298261 - Lx9 LINE L1 -167 7477 7083 3 739 4076 57 32 4 chr15 20196713 20197243 -83297731 + L1Md_F2 LINE L1 6026 6570 -12 3 739 1131 340 72 57 chr15 20197243 20197255 -83297719 - Lx9 LINE L1 -562 7082 7082 3 739 180 0 0 0 chr15 20197255 20197275 -83297699 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 739 1131 340 72 57 chr15 20197275 20197818 -83297156 - Lx9 LINE L1 -563 7081 6526 3 739 25 0 0 0 chr15 20198071 20198096 -83296878 + AT_rich Low_complexity Low_complexity 1 25 0 3 739 477 138 36 122 chr15 20198096 20198318 -83296656 - RMER17C LTR ERVK -133 277 75 3 739 1271 101 42 0 chr15 20198461 20198650 -83296324 - L1_Mus1 LINE L1 -1 6566 6370 3 739 1136 37 0 0 chr15 20198650 20198785 -83296189 + L1_Mus1 LINE L1 6226 6360 -207 3 739 434 259 9 0 chr15 20198826 20198942 -83296032 - RCHARR1 DNA MER1_type -58 916 800 3 739 28864 89 3 16 chr15 20199659 20204574 -83290400 - L1Md_F2 LINE L1 -12 6570 1724 3 739 1053 218 128 36 chr15 20204574 20204878 -83290096 + IAPEY3_LTR LTR ERVK 1 332 0 3 739 1714 129 116 119 chr15 20204880 20205301 -83289673 + MMERVK10C-int LTR ERVK 3 422 -7159 3 739 845 96 8 0 chr15 20205404 20205529 -83289445 + MMERVK10C-int LTR ERVK 708 833 -6748 3 739 732 201 104 0 chr15 20205538 20205692 -83289282 + IAPEz-int LTR ERVK 334 503 -4903 3 739 599 233 234 13 chr15 20205660 20205895 -83289079 + RLTR19-int LTR ERVK 376 662 -5475 3 739 255 211 58 0 chr15 20205890 20205942 -83289032 + RLTR19-int LTR ERVK 950 1004 -983 3 739 280 260 49 20 chr15 20206015 20206117 -83288857 + RLTR19-int LTR ERVK 1462 1566 -6015 3 739 332 175 0 0 chr15 20206134 20206191 -83288783 + IAPEz-int LTR ERVK 447 503 -6039 3 739 1344 138 107 0 chr15 20206191 20206416 -83288558 + IAPEz-int LTR ERVK 5007 5255 -1287 3 739 1626 139 47 25 chr15 20206416 20206755 -83288219 + IAPEY3-int LTR ERVK 6965 7338 -342 3 739 1350 177 67 26 chr15 20206772 20207115 -83287859 + IAPEz-int LTR ERVK 6125 6481 0 3 739 1096 190 141 49 chr15 20207115 20207419 -83287555 + IAPEY3_LTR LTR ERVK 1 332 0 3 739 3652 103 61 1 chr15 20207419 20208494 -83286480 - L1Md_F LINE L1 -4154 1729 587 3 739 27 0 0 0 chr15 20208504 20208531 -83286443 + AT_rich Low_complexity Low_complexity 1 27 0 3 739 597 375 83 4 chr15 20208649 20208927 -83286047 - RCHARR1 DNA MER1_type -663 311 12 3 739 362 284 15 7 chr15 20209041 20209176 -83285798 + Lx6 LINE L1 7312 7447 -13 3 739 230 366 26 26 chr15 20209457 20209572 -83285402 + ID_B1 SINE B4 94 208 -16 3 739 222 37 0 0 chr15 20209662 20209689 -83285285 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 739 28 71 0 0 chr15 20209718 20209774 -83285200 + AT_rich Low_complexity Low_complexity 1 56 0 3 739 2792 215 20 18 chr15 20210675 20211282 -83283692 + Lx2B LINE L1 6379 6986 -14 3 739 1114 106 0 16 chr15 20211718 20211901 -83283073 + (TTC)n Simple_repeat Simple_repeat 1 180 0 3 739 386 85 0 17 chr15 20211928 20211988 -83282986 + (TCC)n Simple_repeat Simple_repeat 2 60 0 3 739 180 135 0 0 chr15 20212126 20212163 -83282811 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 3 739 225 73 0 83 chr15 20213986 20214046 -83280928 + T-rich Low_complexity Low_complexity 6 60 0 3 739 1000 123 7 0 chr15 20214046 20214192 -83280782 - B1_Mus1 SINE Alu 0 148 2 3 739 260 310 67 42 chr15 20214222 20214387 -83280587 - RLTR12B LTR ERVK -44 484 316 3 739 1023 95 0 45 chr15 20215313 20215453 -83279521 + B1_Mm SINE Alu 1 137 -10 3 739 310 21 43 0 chr15 20215453 20215500 -83279474 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 3 739 1023 95 0 45 chr15 20215500 20215513 -83279461 + B1_Mm SINE Alu 138 147 0 3 739 258 224 30 0 chr15 20216167 20216234 -83278740 + (TATATG)n Simple_repeat Simple_repeat 6 74 0 3 739 960 215 153 133 chr15 20216621 20217071 -83277903 - RMER6B LTR ERVK 0 461 3 3 739 377 338 112 7 chr15 20217128 20217280 -83277694 + B4A SINE B4 2 169 -123 3 739 1125 68 7 7 chr15 20217416 20217563 -83277411 + B1_Mm SINE Alu 1 147 0 3 739 362 83 35 23 chr15 20217563 20217649 -83277325 + (CAAA)n Simple_repeat Simple_repeat 2 88 0 3 739 228 182 0 0 chr15 20217722 20217766 -83277208 + (TCTG)n Simple_repeat Simple_repeat 1 44 0 3 739 987 124 0 0 chr15 20217766 20217943 -83277031 + (TC)n Simple_repeat Simple_repeat 2 178 0 3 739 22 0 0 0 chr15 20218016 20218038 -83276936 + AT_rich Low_complexity Low_complexity 1 22 0 3 739 22 0 0 0 chr15 20218241 20218263 -83276711 + AT_rich Low_complexity Low_complexity 1 22 0 3 739 574 332 19 9 chr15 20219314 20219524 -83275450 - B3 SINE B2 0 216 5 3 739 21 0 0 0 chr15 20219886 20219907 -83275067 + AT_rich Low_complexity Low_complexity 1 21 0 3 739 285 363 35 92 chr15 20220672 20220845 -83274129 + B4A SINE B4 12 174 -118 3 739 486 61 0 0 chr15 20220957 20221023 -83273951 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 739 207 0 0 0 chr15 20221524 20221547 -83273427 + (CTA)n Simple_repeat Simple_repeat 1 23 0 3 739 211 352 0 0 chr15 20221804 20221895 -83273079 + (CATA)n Simple_repeat Simple_repeat 4 94 0 3 739 446 161 0 11 chr15 20221900 20221994 -83272980 + GA-rich Low_complexity Low_complexity 1 93 0 3 739 7980 46 10 1 chr15 20222150 20223137 -83271837 - L1Md_F2 LINE L1 0 6582 5587 3 739 427 219 33 32 chr15 20223603 20223735 -83271239 + RLTR18B LTR ERVK 186 307 -205 3 739 810 287 22 9 chr15 20223751 20223976 -83270998 + RLTR18B LTR ERVK 280 507 -5 3 739 519 246 113 0 chr15 20224030 20224172 -83270802 + RLTR18-int LTR ERVK 31 188 -5173 3 739 1658 267 82 73 chr15 20224541 20225216 -83269758 + RLTR18-int LTR ERVK 641 1321 -4040 3 739 2058 309 88 20 chr15 20225473 20226280 -83268694 + RLTR18-int LTR ERVK 1641 2502 -2859 3 739 984 165 44 6 chr15 20226280 20226442 -83268532 + B2_Mm2 SINE B2 2 163 -32 3 739 180 0 0 0 chr15 20226442 20226462 -83268512 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 3 739 984 165 44 6 chr15 20226462 20226482 -83268492 + B2_Mm2 SINE B2 164 191 -4 3 739 589 289 18 0 chr15 20226520 20226686 -83268288 + RLTR18-int LTR ERVK 2492 2660 -2701 3 739 7395 71 9 3 chr15 20226700 20228042 -83266932 - L1Md_F2 LINE L1 0 6582 5247 3 739 2622 228 30 60 chr15 20228054 20228834 -83266140 + RLTR18-int LTR ERVK 2670 3425 -1936 3 739 3887 96 5 11 chr15 20228926 20229484 -83265490 - Lx3_Mus LINE L1 -56 6953 6399 3 739 381 143 0 0 chr15 20229636 20229692 -83265282 + RMER6C LTR ERVK 2 57 -663 3 739 384 177 95 103 chr15 20229733 20229859 -83265115 + RMER6C LTR ERVK 203 327 -363 3 739 260 277 37 37 chr15 20230592 20230727 -83264247 - MLT2B4 LTR ERVL -94 462 276 3 739 313 336 8 25 chr15 20231076 20231195 -83263779 - MLT2B4 LTR ERVL -439 117 1 3 739 291 28 0 0 chr15 20231620 20231656 -83263318 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 739 401 359 67 49 chr15 20231882 20232389 -83262585 - HAL1 LINE L1 -1183 1324 809 3 739 348 120 0 0 chr15 20232646 20232696 -83262278 - Lx2A1 LINE L1 -539 6469 6420 3 739 24 53 0 0 chr15 20233106 20233144 -83261830 + AT_rich Low_complexity Low_complexity 1 38 0 3 739 6371 62 33 8 chr15 20233263 20234121 -83260853 + L1_Mus2 LINE L1 5687 6565 -1 3 739 368 20 20 0 chr15 20234869 20234918 -83260056 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 739 253 354 0 70 chr15 20235142 20235300 -83259674 + B1F2 SINE Alu 1 147 -2 3 739 3128 135 28 8 chr15 20235438 20235945 -83259029 + Lx LINE L1 6138 6654 0 3 739 29 101 0 0 chr15 20235957 20236056 -83258918 + AT_rich Low_complexity Low_complexity 1 99 0 3 739 24 32 0 0 chr15 20237136 20237167 -83257807 + AT_rich Low_complexity Low_complexity 1 31 0 3 739 262 343 110 47 chr15 20237504 20237822 -83257152 - MLT1E1A LTR MaLR -6 674 304 3 739 259 229 50 8 chr15 20239262 20239381 -83255593 + (TA)n Simple_repeat Simple_repeat 1 124 0 3 739 346 323 30 10 chr15 20239815 20239915 -83255059 - LFSINE_Vert SINE SINE -194 265 164 3 739 2051 283 19 0 chr15 20240138 20240619 -83254355 - Lx6 LINE L1 0 7460 6971 3 739 4336 199 52 28 chr15 20240697 20241770 -83253204 - Lx4B LINE L1 -8 7050 5918 3 739 2989 179 29 1 chr15 20241766 20242391 -83252583 + Lx4A LINE L1 5279 5922 -1136 3 739 38 61 0 0 chr15 20242592 20242658 -83252316 + AT_rich Low_complexity Low_complexity 1 66 0 3 739 22 0 0 0 chr15 20242717 20242739 -83252235 + AT_rich Low_complexity Low_complexity 1 22 0 3 739 342 98 0 0 chr15 20243335 20243386 -83251588 + (TTTA)n Simple_repeat Simple_repeat 1 51 0 3 739 26 0 0 0 chr15 20243493 20243519 -83251455 + AT_rich Low_complexity Low_complexity 1 26 0 3 739 252 296 70 55 chr15 20243660 20243860 -83251114 + L1MCa LINE L1 532 734 -5774 3 739 333 47 0 0 chr15 20244400 20244443 -83250531 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 739 377 296 129 14 chr15 20244495 20244704 -83250270 + L1MCa LINE L1 1160 1392 -5116 3 739 266 268 57 36 chr15 20244873 20245044 -83249930 + L1MCa LINE L1 1643 1827 -4590 3 739 249 66 37 62 chr15 20245837 20245918 -83249056 + (TTTG)n Simple_repeat Simple_repeat 2 80 0 3 739 240 35 0 0 chr15 20246189 20246218 -83248756 + (T)n Simple_repeat Simple_repeat 1 29 0 3 739 37974 29 1 0 chr15 20246323 20253170 -83241804 - L1Md_T LINE L1 0 6585 1 3 739 355 272 6 4 chr15 20253417 20253527 -83241447 + B2_Mm2 SINE B2 4 114 -84 3 739 34910 82 8 8 chr15 20254016 20260393 -83234581 - L1Md_F2 LINE L1 -1 6581 203 3 739 265 370 126 29 chr15 20261175 20261587 -83233387 + L2a LINE L2 2935 3386 -40 3 739 25 0 0 0 chr15 20261908 20261933 -83233041 + AT_rich Low_complexity Low_complexity 1 25 0 3 739 2905 110 14 2 chr15 20262197 20262627 -83232347 + Lx3_Mus LINE L1 6563 6997 -12 3 739 21 71 0 0 chr15 20262886 20262928 -83232046 + AT_rich Low_complexity Low_complexity 1 42 0 3 739 1116 265 112 3 chr15 20263977 20264280 -83230694 - MTD LTR MaLR 0 419 84 3 739 1930 96 137 0 chr15 20264327 20264620 -83230354 - L1_Mus3 LINE L1 -6 6632 6300 3 739 941 278 96 66 chr15 20264865 20265692 -83229282 - MTD-int LTR MaLR -120 1138 6 3 739 757 333 89 39 chr15 20265717 20266060 -83228914 - MTD LTR MaLR -14 405 18 3 739 1512 57 0 0 chr15 20266255 20266494 -83228480 - L1Md_T LINE L1 0 6582 6390 3 739 190 0 32 32 chr15 20266535 20266566 -83228408 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 3 739 10003 78 0 1 chr15 20267057 20268399 -83226575 - L1Md_F2 LINE L1 -632 5251 3911 3 739 2406 71 3 0 chr15 20268399 20268710 -83226264 + L1Md_F2 LINE L1 5274 5585 -298 3 739 7451 76 3 6 chr15 20268711 20269709 -83225265 + L1Md_F2 LINE L1 5587 6581 -1 3 739 463 118 35 0 chr15 20270015 20270100 -83224874 + L1_Mus2 LINE L1 6479 6566 0 3 739 2553 80 3 14 chr15 20270476 20270830 -83224144 + MTA_Mm LTR MaLR 47 396 0 3 739 7064 84 23 65 chr15 20270830 20271205 -83223769 + MTA_Mm-int LTR MaLR 1 376 -722 3 739 2392 90 39 11 chr15 20271205 20271564 -83223410 + L1Md_F2 LINE L1 6213 6581 -1 3 739 7064 84 23 65 chr15 20271564 20272335 -83222639 + MTA_Mm-int LTR MaLR 377 1097 -1 3 739 3067 56 5 12 chr15 20272335 20272734 -83222240 + MTA_Mm LTR MaLR 1 396 0 3 739 336 83 0 0 chr15 20272735 20272783 -83222191 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 739 198 0 0 0 chr15 20272784 20272806 -83222168 + (GA)n Simple_repeat Simple_repeat 2 23 0 3 739 30219 81 3 1 chr15 20273388 20278902 -83216072 + L1Md_F LINE L1 181 5706 -177 3 739 38304 7 0 0 chr15 20278902 20284466 -83210508 + L1Md_A LINE L1 23 5586 -297 4 739 8949 5 0 0 chr15 20284466 20285462 -83209512 + L1Md_A LINE L1 5587 6582 0 4 739 7056 61 1 0 chr15 20285466 20286354 -83208620 + L1Md_F2 LINE L1 5693 6581 -1 4 739 305 24 24 0 chr15 20287300 20287342 -83207632 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 739 432 0 0 0 chr15 20288365 20288413 -83206561 + (TCTA)n Simple_repeat Simple_repeat 4 51 0 4 739 643 335 68 31 chr15 20288574 20288925 -83206049 - ORR1D2 LTR MaLR -2 368 5 4 739 3952 138 98 85 chr15 20288925 20289818 -83205156 + RMER17A2 LTR ERVK 1 905 -1 4 739 30 59 0 0 chr15 20289966 20290017 -83204957 + AT_rich Low_complexity Low_complexity 1 51 0 4 739 558 0 0 0 chr15 20290049 20290111 -83204863 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 739 442 210 23 98 chr15 20290114 20290163 -83204811 - RMER4B LTR ERVK 0 585 543 4 739 2175 129 0 12 chr15 20290163 20290493 -83204481 + ORR1A3 LTR MaLR 1 326 0 4 739 646 213 367 37 chr15 20290493 20290867 -83204107 - RMER4B LTR ERVK -43 542 5 4 739 40 0 0 0 chr15 20290897 20290937 -83204037 + AT_rich Low_complexity Low_complexity 1 40 0 4 739 2580 197 32 79 chr15 20290971 20291692 -83203282 - RMER6C LTR ERVK 0 690 4 4 739 2642 82 5 0 chr15 20291692 20292069 -83202905 - MusHAL1 LINE L1 -767 1945 1567 4 739 1892 125 32 6 chr15 20292069 20292383 -83202591 + Lx2 LINE L1 6675 6996 -1 4 739 333 68 0 0 chr15 20292619 20292663 -83202311 + (TTTC)n Simple_repeat Simple_repeat 3 46 0 4 739 240 86 0 0 chr15 20292665 20292700 -83202274 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 739 1009 122 0 0 chr15 20292700 20292839 -83202135 - B1_Mus1 SINE Alu -9 139 1 4 739 1875 281 58 7 chr15 20293518 20294056 -83200918 - Lx6 LINE L1 -1 7459 6895 4 739 991 228 10 0 chr15 20294073 20294270 -83200704 - Lx6 LINE L1 -812 6648 6450 4 739 2306 274 59 9 chr15 20294654 20295299 -83199675 - Lx6 LINE L1 -26 7434 6758 4 739 310 267 67 0 chr15 20295794 20295884 -83199090 + RLTR23 LTR ERV1 9 104 -326 4 739 580 250 32 93 chr15 20296004 20296282 -83198692 + RLTR23 LTR ERV1 170 430 0 4 739 335 150 0 62 chr15 20296929 20296993 -83197981 + RLTR19-int LTR ERVK 289 348 -5789 4 739 661 267 56 85 chr15 20297417 20297687 -83197287 + RLTR19-int LTR ERVK 562 823 -5314 4 739 282 125 0 0 chr15 20297687 20297735 -83197239 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 739 3530 160 151 20 chr15 20297803 20298184 -83196790 + RLTR19-int LTR ERVK 930 1361 -4776 4 739 252 122 0 0 chr15 20298184 20298225 -83196749 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 739 3642 195 177 27 chr15 20298225 20299815 -83195159 + RLTR19-int LTR ERVK 1362 3190 -2947 4 739 544 176 0 121 chr15 20299972 20300121 -83194853 + RLTR19-int LTR ERVK 3484 3614 -2523 4 739 24 32 0 0 chr15 20300617 20300648 -83194326 + AT_rich Low_complexity Low_complexity 1 31 0 4 739 4489 77 19 3 chr15 20301097 20301724 -83193250 - L1_Mus3 LINE L1 -7 6631 5995 4 739 1373 290 24 17 chr15 20302932 20302994 -83191980 + MTC LTR MaLR 8 70 -351 4 739 357 0 57 0 chr15 20302994 20303047 -83191927 + (CAA)n Simple_repeat Simple_repeat 2 57 0 4 739 1373 290 24 17 chr15 20303047 20303394 -83191580 + MTC LTR MaLR 71 419 -2 4 739 24 0 0 0 chr15 20305509 20305533 -83189441 + AT_rich Low_complexity Low_complexity 1 24 0 4 739 2173 108 38 0 chr15 20306041 20306356 -83188618 + ORR1A2 LTR MaLR 1 327 0 4 739 332 40 0 0 chr15 20306760 20306810 -83188164 - L1_Mus3 LINE L1 -8 6630 6581 4 739 944 112 70 0 chr15 20306813 20306956 -83188018 + L1_Mus3 LINE L1 6168 6320 -318 4 739 2742 281 48 55 chr15 20307460 20309342 -83185632 - Lx5 LINE L1 -19 7031 5185 4 739 48 32 0 0 chr15 20309590 20309652 -83185322 + AT_rich Low_complexity Low_complexity 1 62 0 4 739 378 0 0 0 chr15 20309665 20309707 -83185267 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 739 1854 331 47 50 chr15 20309707 20310815 -83184159 + Lx9 LINE L1 6369 7472 -172 4 739 372 94 0 0 chr15 20310815 20310868 -83184106 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 739 239 418 0 0 chr15 20311939 20312042 -83182932 + PB1D10 SINE Alu 8 110 -7 4 739 23 0 0 0 chr15 20312042 20312065 -83182909 + AT_rich Low_complexity Low_complexity 1 23 0 4 739 2357 220 10 27 chr15 20312748 20313271 -83181703 + RLTR28 LTR ERVL 7 520 -4 4 739 2630 37 3 0 chr15 20313873 20314196 -83180778 - L1Md_T LINE L1 -489 6093 5770 4 739 1990 49 0 0 chr15 20314196 20314441 -83180533 + L1Md_A LINE L1 6338 6582 0 4 739 195 42 0 0 chr15 20314449 20314473 -83180501 + (A)n Simple_repeat Simple_repeat 1 24 0 4 739 1139 61 0 39 chr15 20314768 20314921 -83180053 + B1_Mus2 SINE Alu 1 147 0 4 739 321 68 0 0 chr15 20314921 20314965 -83180009 + (TAAAA)n Simple_repeat Simple_repeat 1 44 0 4 739 254 217 14 0 chr15 20315748 20315817 -83179157 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 740 225 169 0 0 chr15 20317212 20317271 -83177703 + GA-rich Low_complexity Low_complexity 2 60 0 4 740 566 238 93 55 chr15 20317445 20317627 -83177347 - B2_Mm2 SINE B2 -3 192 4 4 740 34 72 0 0 chr15 20317717 20317786 -83177188 + AT_rich Low_complexity Low_complexity 1 69 0 4 740 676 298 111 4 chr15 20317964 20318217 -83176757 + ORR1D2 LTR MaLR 90 369 -1 4 740 2074 283 85 46 chr15 20318219 20319580 -83175394 + ORR1D2-int LTR MaLR 2 1337 -172 4 740 1953 147 29 3 chr15 20319655 20319996 -83174978 - Lx3B LINE L1 -1 6972 6623 4 740 328 243 104 2 chr15 20319997 20320151 -83174823 + ORR1D2-int LTR MaLR 1264 1366 -4 4 740 855 297 93 43 chr15 20320158 20320503 -83174471 + ORR1D2 LTR MaLR 7 368 -2 4 740 908 133 7 0 chr15 20320760 20320903 -83174071 - RMER6C LTR ERVK 0 690 547 4 740 2930 36 6 3 chr15 20320908 20321267 -83173707 - L1Md_F3 LINE L1 -21 6563 6204 4 740 1147 29 0 0 chr15 20321256 20321394 -83173580 + L1_Mm LINE L1 5135 5272 -611 4 740 1437 210 82 85 chr15 20321394 20321867 -83173107 - RMER6C LTR ERVK -132 558 87 4 740 25 31 0 0 chr15 20322317 20322349 -83172625 + AT_rich Low_complexity Low_complexity 1 32 0 4 740 22 56 0 0 chr15 20322590 20322626 -83172348 + AT_rich Low_complexity Low_complexity 1 36 0 4 740 723 71 0 0 chr15 20322983 20323081 -83171893 + (TTTC)n Simple_repeat Simple_repeat 2 99 0 4 740 398 36 18 0 chr15 20323640 20323696 -83171278 + (TAA)n Simple_repeat Simple_repeat 1 57 0 4 740 1016 286 48 111 chr15 20323991 20324153 -83170821 - MTD LTR MaLR 0 419 249 4 740 1078 88 0 13 chr15 20324153 20324302 -83170672 - B1_Mus1 SINE Alu -1 147 1 4 740 1016 286 48 111 chr15 20324302 20324514 -83170460 - MTD LTR MaLR -171 248 72 4 740 216 0 0 0 chr15 20324514 20324538 -83170436 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 4 740 1016 286 48 111 chr15 20324538 20324603 -83170371 - MTD LTR MaLR -348 71 7 4 740 849 20 0 0 chr15 20324622 20324721 -83170253 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 4 740 394 184 19 19 chr15 20325048 20325153 -83169821 + (CATA)n Simple_repeat Simple_repeat 2 106 0 4 740 1797 208 147 42 chr15 20325823 20326436 -83168538 - RMER6C LTR ERVK -13 677 1 4 740 272 357 50 25 chr15 20327797 20327998 -83166976 - MARNA DNA Mariner -197 389 184 4 740 180 135 0 0 chr15 20327999 20328036 -83166938 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 4 740 2467 214 39 27 chr15 20328139 20328726 -83166248 + Lx5 LINE L1 5867 6460 -590 4 740 1352 273 115 10 chr15 20328724 20329142 -83165832 + Lx5 LINE L1 6577 7038 -12 4 740 692 126 8 0 chr15 20329144 20329263 -83165711 + (GA)n Simple_repeat Simple_repeat 1 120 0 4 740 486 307 7 49 chr15 20329282 20329426 -83165548 + RSINE1 SINE B4 14 151 -14 4 740 4991 130 34 8 chr15 20329530 20330331 -83164643 - Lx3_Mus LINE L1 -17 6992 6171 4 740 569 161 59 0 chr15 20330331 20330449 -83164525 + Lx4A LINE L1 6933 7057 -1 4 740 1186 54 0 0 chr15 20331088 20331236 -83163738 - B1_Mus1 SINE Alu 0 148 1 4 740 456 172 0 0 chr15 20332772 20332859 -83162115 + (TG)n Simple_repeat Simple_repeat 1 87 0 4 740 219 36 0 0 chr15 20333205 20333233 -83161741 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 740 1918 219 5 12 chr15 20334067 20334488 -83160486 - MTC LTR MaLR -3 418 1 4 740 3523 225 148 13 chr15 20334488 20335534 -83159440 - MTC-int LTR MaLR 0 1258 2 4 740 873 245 15 25 chr15 20335537 20335727 -83159247 - MTC LTR MaLR -2 419 231 4 740 468 0 0 0 chr15 20335727 20335779 -83159195 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 740 6484 110 26 0 chr15 20335789 20336762 -83158212 - L1_Mus4 LINE L1 -13 6623 5629 4 740 360 268 136 14 chr15 20336840 20336980 -83157994 + MERVL_2A-int LTR ERVL 3301 3457 -2028 4 740 1175 278 109 69 chr15 20336980 20337625 -83157349 + RMER13A LTR ERVK 1 709 -199 4 740 1100 266 101 65 chr15 20337736 20338459 -83156515 + MERVL_2A-int LTR ERVL 3555 4303 -1458 4 740 1813 264 47 4 chr15 20338444 20338931 -83156043 + MERVL_2A-int LTR ERVL 4746 5253 -508 4 740 2924 243 31 3 chr15 20338953 20339564 -83155410 - Lx5 LINE L1 -10 7040 6413 4 740 2282 208 47 110 chr15 20339562 20340398 -83154576 + L1_Mur2 LINE L1 4728 5510 -367 4 740 1657 237 51 7 chr15 20340428 20340861 -83154113 + MERVL_2A-int LTR ERVL 5239 5690 -71 4 740 429 250 21 7 chr15 20340859 20341000 -83153974 + MERVL_2A-int LTR ERVL 5619 5761 0 4 740 641 319 46 20 chr15 20341002 20341424 -83153550 + MT2B LTR ERVL 3 597 -4 4 740 1198 41 14 0 chr15 20341573 20341719 -83153255 + B1_Mus1 SINE Alu 1 148 0 4 740 270 0 65 22 chr15 20341719 20341765 -83153209 + (CAAAAA)n Simple_repeat Simple_repeat 6 53 0 4 740 216 157 45 57 chr15 20341765 20341853 -83153121 + (CAAA)n Simple_repeat Simple_repeat 1 87 0 4 740 3432 154 23 4 chr15 20341857 20342598 -83152376 + Lx LINE L1 5784 6565 -1 4 740 325 371 9 0 chr15 20342778 20342883 -83152091 + B1F2 SINE Alu 1 106 -43 4 740 756 91 0 0 chr15 20343527 20343637 -83151337 + (TG)n Simple_repeat Simple_repeat 1 110 0 4 740 295 329 8 20 chr15 20344007 20344173 -83150801 + L1M1 LINE L1 5665 5827 -473 4 740 4762 92 0 13 chr15 20345176 20345855 -83149119 + L1Md_F2 LINE L1 5913 6582 0 4 740 243 347 31 31 chr15 20346987 20347115 -83147859 - MLT1B LTR MaLR -55 335 208 4 740 841 301 66 19 chr15 20347256 20347574 -83147400 - MLT-int LTR MaLR -32 1703 1371 4 740 234 381 30 48 chr15 20347748 20347916 -83147058 - MLT1B LTR MaLR -4 386 222 4 740 308 241 48 12 chr15 20348187 20348271 -83146703 - RMER15 LTR ERVL -132 443 357 4 740 306 0 0 0 chr15 20348292 20348326 -83146648 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 740 306 106 0 0 chr15 20348326 20348372 -83146602 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 740 570 249 77 57 chr15 20348547 20348756 -83146218 + ORR1D2 LTR MaLR 6 218 -152 4 740 804 216 149 27 chr15 20348754 20349016 -83145958 + RMER15 LTR ERVL 6 299 -276 4 740 183 42 0 0 chr15 20349037 20349061 -83145913 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 740 358 258 0 49 chr15 20349089 20349191 -83145783 + ORR1D2 LTR MaLR 261 357 -13 4 740 536 309 116 2 chr15 20349215 20349466 -83145508 + ORR1D2-int LTR MaLR 12 333 -1247 4 740 791 329 114 117 chr15 20349515 20350172 -83144802 + ORR1D2-int LTR MaLR 524 1178 -192 4 740 512 222 0 0 chr15 20350481 20350580 -83144394 - MTC LTR MaLR -219 202 104 4 740 576 0 0 0 chr15 20350588 20350652 -83144322 + (TC)n Simple_repeat Simple_repeat 2 65 0 4 740 28 0 0 0 chr15 20350982 20351010 -83143964 + AT_rich Low_complexity Low_complexity 1 28 0 4 740 1458 118 0 4 chr15 20351112 20351341 -83143633 + L1_Mus4 LINE L1 6404 6631 -5 5 740 376 227 45 14 chr15 20351377 20351481 -83143493 - MTC LTR MaLR -290 106 1 4 740 213 153 0 63 chr15 20351796 20351859 -83143115 + A-rich Low_complexity Low_complexity 1 59 0 5 740 414 0 0 0 chr15 20352428 20352474 -83142500 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 740 313 369 76 8 chr15 20354030 20354161 -83140813 - ID_B1 SINE B4 -29 195 56 5 740 231 395 9 0 chr15 20354148 20354257 -83140717 - PB1D7 SINE Alu -7 113 4 5 740 254 167 0 57 chr15 20354589 20354659 -83140315 + CT-rich Low_complexity Low_complexity 5 70 0 5 740 251 320 122 23 chr15 20354678 20354809 -83140165 - ID_B1 SINE B4 -5 219 76 5 740 30 27 0 0 chr15 20355130 20355167 -83139807 + AT_rich Low_complexity Low_complexity 1 37 0 5 740 525 68 0 0 chr15 20356065 20356139 -83138835 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 740 183 71 71 0 chr15 20356444 20356486 -83138488 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 740 1290 139 111 8 chr15 20356950 20357203 -83137771 + Lx2 LINE L1 6706 6984 -13 5 740 429 20 0 0 chr15 20357203 20357253 -83137721 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 740 378 0 0 0 chr15 20357253 20357294 -83137680 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 740 22 0 0 0 chr15 20357664 20357686 -83137288 + AT_rich Low_complexity Low_complexity 1 22 0 5 740 355 123 0 52 chr15 20358652 20358729 -83136245 - Lx4A LINE L1 -1 7057 6985 5 740 633 14 0 0 chr15 20358748 20358822 -83136152 + (TTTC)n Simple_repeat Simple_repeat 2 75 0 5 740 287 227 118 13 chr15 20358882 20358958 -83136016 - B3A SINE B2 -112 86 3 5 740 824 71 40 0 chr15 20358989 20359115 -83135859 - L1_Mus1 LINE L1 -1 6566 6436 5 740 285 229 31 0 chr15 20359355 20359451 -83135523 + (TCTA)n Simple_repeat Simple_repeat 4 102 0 5 740 333 39 0 0 chr15 20360342 20360394 -83134580 - L1_Mus4 LINE L1 0 6636 6585 5 740 891 53 0 0 chr15 20360492 20360605 -83134369 + (TA)n Simple_repeat Simple_repeat 2 114 0 5 740 300 302 82 78 chr15 20360830 20361099 -83133875 + L1M4 LINE L1 4848 5117 -1029 5 740 396 0 0 0 chr15 20361174 20361218 -83133756 + (TATG)n Simple_repeat Simple_repeat 3 46 0 5 740 287 354 69 12 chr15 20361218 20361378 -83133596 + MTEa LTR MaLR 5 173 -206 5 740 3345 164 28 0 chr15 20361379 20361954 -83133020 + Lx3C LINE L1 6377 6967 -9 5 740 28 29 0 0 chr15 20361968 20362003 -83132971 + AT_rich Low_complexity Low_complexity 1 35 0 5 740 36 23 0 0 chr15 20362233 20362276 -83132698 + AT_rich Low_complexity Low_complexity 1 43 0 5 740 822 79 8 8 chr15 20362652 20362780 -83132194 + Lx2A LINE L1 6876 7003 -5 5 740 2543 207 9 25 chr15 20363134 20363249 -83131725 - Lx2 LINE L1 -2 6995 6893 5 740 3308 43 5 0 chr15 20363249 20363643 -83131331 - MTA_Mm LTR MaLR 0 396 1 5 740 2543 207 9 25 chr15 20363643 20364051 -83130923 - Lx2 LINE L1 -105 6892 6480 5 740 279 214 14 0 chr15 20365020 20365090 -83129884 + L1M2 LINE L1 1966 2036 -4813 5 740 192 182 0 0 chr15 20365103 20365147 -83129827 + A-rich Low_complexity Low_complexity 2 45 0 5 740 257 338 0 0 chr15 20365360 20365434 -83129540 + ID4 SINE ID 6 79 -4 5 740 3738 120 18 13 chr15 20365537 20366138 -83128836 + Lx3B LINE L1 5990 6593 -380 5 740 302 78 19 19 chr15 20366515 20366567 -83128407 + Lx3B LINE L1 6589 6640 -333 5 740 395 132 15 0 chr15 20366567 20366635 -83128339 + Lx3B LINE L1 6901 6969 -4 5 740 207 0 0 0 chr15 20367010 20367033 -83127941 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 740 881 297 90 19 chr15 20367096 20367408 -83127566 + ORR1D2 LTR MaLR 11 344 -26 5 740 3430 254 72 73 chr15 20367621 20369900 -83125074 + L1_Mur3 LINE L1 124 2405 -3475 5 740 1431 269 14 4 chr15 20369910 20370334 -83124640 + Lx6 LINE L1 6913 7444 -16 5 740 567 0 0 0 chr15 20371830 20371893 -83123081 + (TA)n Simple_repeat Simple_repeat 2 64 0 5 740 359 326 109 28 chr15 20372350 20372707 -83122267 - Tigger2b DNA MER2_type -216 510 125 5 740 250 375 0 0 chr15 20373244 20373324 -83121650 - ID4 SINE ID -2 81 2 5 740 539 262 172 5 chr15 20373712 20373729 -83121245 - MTEb LTR MaLR -43 336 320 5 740 3138 56 5 2 chr15 20373729 20374124 -83120850 - MTA_Mm LTR MaLR 0 396 1 5 740 539 262 172 5 chr15 20374124 20374298 -83120676 - MTEb LTR MaLR -60 319 113 5 740 4723 58 0 13 chr15 20374313 20374924 -83120050 + L1Md_F2 LINE L1 5979 6581 -1 5 740 333 376 48 13 chr15 20375070 20375299 -83119675 + B4A SINE B4 5 241 -51 5 740 285 29 0 0 chr15 20375844 20375878 -83119096 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 740 636 48 0 0 chr15 20375878 20375961 -83119013 + (GA)n Simple_repeat Simple_repeat 2 85 0 5 740 31 0 0 0 chr15 20377010 20377041 -83117933 + AT_rich Low_complexity Low_complexity 1 31 0 5 740 252 0 0 0 chr15 20377100 20377128 -83117846 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 740 28 79 0 0 chr15 20377935 20377998 -83116976 + AT_rich Low_complexity Low_complexity 1 63 0 5 740 198 0 0 0 chr15 20379152 20379174 -83115800 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 740 25 0 0 0 chr15 20380142 20380167 -83114807 + AT_rich Low_complexity Low_complexity 1 25 0 5 740 461 312 18 48 chr15 20383076 20383244 -83111730 + RSINE1 SINE B4 3 165 0 5 740 201 226 0 0 chr15 20383244 20383297 -83111677 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 740 1064 66 0 32 chr15 20383527 20383684 -83111290 - L1Md_F3 LINE L1 -1 6583 6432 5 740 1962 125 7 3 chr15 20384071 20384377 -83110597 - L1_Mus4 LINE L1 -5 6631 6325 5 740 25 65 0 0 chr15 20384523 20384569 -83110405 + AT_rich Low_complexity Low_complexity 1 46 0 5 740 363 23 0 0 chr15 20385653 20385697 -83109277 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 5 740 1695 153 68 0 chr15 20385698 20385992 -83108982 - Lx3A LINE L1 -8 6973 6660 5 740 198 314 0 14 chr15 20386248 20386319 -83108655 + L2 LINE L2 2401 2470 -949 5 740 187 194 14 27 chr15 20386545 20386619 -83108355 + GA-rich Low_complexity Low_complexity 4 76 0 5 740 540 364 50 15 chr15 20387440 20387702 -83107272 + Tigger5 DNA MER2_type 2 272 -2134 5 740 2828 108 49 17 chr15 20390394 20390865 -83104109 + Lx LINE L1 6163 6648 -6 5 740 2972 63 0 39 chr15 20390935 20391345 -83103629 + L1_Mus1 LINE L1 6174 6567 0 5 740 294 29 0 0 chr15 20391565 20391600 -83103374 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 740 291 255 84 9 chr15 20391825 20391932 -83103042 + Tigger5 DNA MER2_type 2292 2406 0 5 740 700 321 80 28 chr15 20392408 20392873 -83102101 + L2 LINE L2 2250 2738 -681 5 740 241 265 71 29 chr15 20392894 20392964 -83102010 + ZP3AR Satellite Satellite 17 89 -123 5 740 295 307 0 13 chr15 20392924 20393000 -83101974 + ID4 SINE ID 8 82 -1 5 740 250 363 52 52 chr15 20393321 20393629 -83101345 - LTR33C LTR ERVL -4 625 318 5 740 258 95 0 0 chr15 20393835 20393877 -83101097 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 740 1191 270 38 49 chr15 20395185 20395551 -83099423 - ORR1D1 LTR MaLR -8 366 5 5 740 25 0 0 0 chr15 20395694 20395719 -83099255 + AT_rich Low_complexity Low_complexity 1 25 0 5 740 2711 264 33 14 chr15 20395754 20396414 -83098560 - Lx5 LINE L1 -45 7005 6333 5 740 313 316 26 94 chr15 20396414 20396606 -83098368 - RLTR25B LTR ERVK 0 1028 850 5 740 24 53 0 0 chr15 20396687 20396725 -83098249 + AT_rich Low_complexity Low_complexity 1 38 0 5 740 553 193 0 34 chr15 20396962 20397080 -83097894 - Lx5 LINE L1 -1229 5821 5708 5 740 1697 241 24 27 chr15 20397131 20397545 -83097429 + MTC LTR MaLR 1 413 -8 5 740 240 291 9 52 chr15 20398376 20398492 -83096482 + CT-rich Low_complexity Low_complexity 2 112 0 5 740 21 0 0 0 chr15 20399510 20399531 -83095443 + AT_rich Low_complexity Low_complexity 1 21 0 5 740 228 182 0 0 chr15 20399742 20399786 -83095188 + B3A SINE B2 2 45 -153 5 740 300 325 90 24 chr15 20399821 20399988 -83094986 + B3 SINE B2 39 216 0 5 740 6883 41 24 0 chr15 20400078 20400925 -83094049 + L1Md_F2 LINE L1 5703 6569 -13 5 740 4407 218 76 28 chr15 20401503 20403004 -83091970 + Lx5 LINE L1 5153 6747 -303 5 740 2750 72 5 5 chr15 20403004 20403380 -83091594 + L1_Mus2 LINE L1 6191 6566 0 5 740 4407 237 99 41 chr15 20403380 20403597 -83091377 + Lx5 LINE L1 6748 6962 -88 5 740 40482 16 5 6 chr15 20404550 20411149 -83083825 - L1Md_A LINE L1 0 6582 1 5 740 2878 184 26 2 chr15 20411881 20412426 -83082548 - Lx4A LINE L1 0 7058 6501 5 740 1199 48 0 0 chr15 20412445 20412592 -83082382 - B1_Mus2 SINE Alu 0 147 1 5 740 263 306 16 126 chr15 20412603 20412730 -83082244 + MT2A LTR ERVL 84 196 -337 5 740 203 0 0 36 chr15 20412730 20412758 -83082216 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 5 740 41 36 0 0 chr15 20412758 20412813 -83082161 + AT_rich Low_complexity Low_complexity 1 55 0 5 740 771 308 76 8 chr15 20412813 20413075 -83081899 + MT2A LTR ERVL 180 459 -74 5 740 250 310 0 0 chr15 20413312 20413383 -83081591 - Lx7 LINE L1 -401 7295 7225 5 740 381 265 12 0 chr15 20413392 20413475 -83081499 + MT2A LTR ERVL 377 460 -73 5 740 339 25 0 0 chr15 20413582 20413622 -83081352 + (TTTTA)n Simple_repeat Simple_repeat 2 41 0 5 740 425 273 36 0 chr15 20413622 20413761 -83081213 + Lx7 LINE L1 7553 7696 0 5 740 6870 105 18 5 chr15 20413861 20414868 -83080106 + L1_Mus4 LINE L1 5617 6636 0 5 740 477 0 0 0 chr15 20415053 20415106 -83079868 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 740 32 0 0 0 chr15 20415378 20415410 -83079564 + AT_rich Low_complexity Low_complexity 1 32 0 5 740 26 64 0 0 chr15 20415544 20415591 -83079383 + AT_rich Low_complexity Low_complexity 1 47 0 5 740 241 109 0 18 chr15 20416793 20416849 -83078125 - L1Md_F2 LINE L1 0 6582 6528 5 740 1344 77 5 25 chr15 20416903 20417104 -83077870 + L1_Mus2 LINE L1 6368 6564 -2 5 740 37 39 0 0 chr15 20418389 20418440 -83076534 + AT_rich Low_complexity Low_complexity 1 51 0 5 740 29 98 0 0 chr15 20418599 20418691 -83076283 + AT_rich Low_complexity Low_complexity 1 92 0 6 740 21 0 0 0 chr15 20418949 20418970 -83076004 + AT_rich Low_complexity Low_complexity 1 21 0 6 740 519 186 0 0 chr15 20419405 20419507 -83075467 + (TA)n Simple_repeat Simple_repeat 2 103 0 6 740 351 60 0 0 chr15 20419511 20419561 -83075413 + (GA)n Simple_repeat Simple_repeat 2 51 0 6 740 233 264 91 91 chr15 20420819 20420940 -83074034 - LTR81B LTR ERV1? -974 419 299 6 740 421 357 40 117 chr15 20421028 20421352 -83073622 - Lx8 LINE L1 -737 6736 6438 6 740 243 0 0 0 chr15 20421410 20421437 -83073537 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 740 1158 62 7 0 chr15 20421439 20421584 -83073390 - B1_Mm SINE Alu 0 147 2 6 740 27 29 0 0 chr15 20421871 20421905 -83073069 + AT_rich Low_complexity Low_complexity 1 34 0 6 740 230 295 72 24 chr15 20423079 20423204 -83071770 + L1MA6 LINE L1 6030 6160 -140 6 740 335 361 110 14 chr15 20423234 20423526 -83071448 + Lx8 LINE L1 7150 7469 -4 6 740 459 230 0 0 chr15 20425614 20425727 -83069247 + (TA)n Simple_repeat Simple_repeat 2 114 0 6 740 1758 164 5 69 chr15 20425968 20426361 -83068613 + Lx2A1 LINE L1 6641 7008 0 6 740 219 235 0 0 chr15 20426596 20426762 -83068212 + GA-rich Low_complexity Low_complexity 1 166 0 6 740 966 18 0 0 chr15 20426769 20426881 -83068093 + (CATATA)n Simple_repeat Simple_repeat 2 113 0 6 740 7136 95 6 2 chr15 20427464 20428449 -83066525 + L1_Mus4 LINE L1 5648 6636 0 6 740 33 73 0 0 chr15 20428627 20428695 -83066279 + AT_rich Low_complexity Low_complexity 1 68 0 6 740 37926 10 1 7 chr15 20428824 20434025 -83060949 + L1Md_A LINE L1 422 5585 -298 6 740 8885 10 0 0 chr15 20434026 20435022 -83059952 + L1Md_A LINE L1 5587 6582 0 6 740 306 321 48 0 chr15 20435126 20435210 -83059764 - PB1D10 SINE Alu -2 115 28 6 740 24 0 0 0 chr15 20435227 20435251 -83059723 + AT_rich Low_complexity Low_complexity 1 24 0 6 740 7230 82 8 5 chr15 20435501 20437079 -83057895 - L1Md_F2 LINE L1 -12 6570 4987 6 740 34201 39 1 49 chr15 20437081 20440200 -83054774 - L1Md_A LINE L1 0 6582 3804 6 740 540 0 0 0 chr15 20440200 20440260 -83054714 + (TA)n Simple_repeat Simple_repeat 2 61 0 6 740 34201 100 21 68 chr15 20440260 20443861 -83051113 - L1Md_A LINE L1 -2080 3803 202 6 740 368 287 17 0 chr15 20444144 20444259 -83050715 + MLT2C1 LTR ERVL 16 132 -265 6 740 2172 268 157 19 chr15 20444727 20445056 -83049918 + RMER1B Other Other 60 543 -523 6 740 2038 221 206 8 chr15 20445056 20445657 -83049317 - RMER6D LTR ERVK 0 720 1 6 740 2172 252 108 25 chr15 20445657 20446120 -83048854 + RMER1B Other Other 544 1049 -17 6 740 640 132 102 38 chr15 20446132 20446289 -83048685 + Lx3A LINE L1 6804 6970 -11 6 740 342 0 0 0 chr15 20446289 20446327 -83048647 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 6 92 3138 127 29 0 chr15 20446854 20447334 -83047640 - L1_Mm LINE L1 -205 5678 5185 6 741 1048 173 101 5 chr15 20447368 20447577 -83047397 + Lx5 LINE L1 6470 6698 -352 6 741 817 223 53 26 chr15 20447580 20447806 -83047168 + Lx4B LINE L1 6823 7054 -4 6 741 21 36 0 0 chr15 20449569 20449597 -83045377 + AT_rich Low_complexity Low_complexity 1 28 0 6 741 29 28 0 0 chr15 20450317 20450353 -83044621 + AT_rich Low_complexity Low_complexity 1 36 0 6 741 615 95 0 0 chr15 20450484 20450589 -83044385 + (GA)n Simple_repeat Simple_repeat 2 106 0 6 741 4189 83 36 50 chr15 20450672 20451309 -83043665 + L1_Mus2 LINE L1 5938 6565 -1 6 741 6126 109 10 8 chr15 20452059 20452994 -83041980 - Lx3_Mus LINE L1 0 7009 6073 6 741 279 140 0 0 chr15 20453155 20453205 -83041769 + (CATATA)n Simple_repeat Simple_repeat 2 51 0 6 741 2904 102 5 0 chr15 20453892 20454296 -83040678 + L1_Mm LINE L1 5315 5720 -163 6 741 2916 56 15 3 chr15 20454296 20454645 -83040329 + MTA_Mm LTR MaLR 1 352 -44 6 741 1621 59 27 0 chr15 20454645 20454864 -83040110 - L1Md_F2 LINE L1 -2 6580 6356 6 741 2916 56 15 3 chr15 20454864 20454905 -83040069 + MTA_Mm LTR MaLR 353 394 -2 6 741 6308 84 2 2 chr15 20454905 20455756 -83039218 + L1_Mus2 LINE L1 5716 6566 0 6 741 24 32 0 0 chr15 20456247 20456278 -83038696 + AT_rich Low_complexity Low_complexity 1 31 0 6 741 3382 266 77 24 chr15 20456278 20457311 -83037663 - Lx5 LINE L1 0 7050 5964 6 741 1121 188 71 105 chr15 20457308 20457701 -83037273 + Lx5 LINE L1 5664 6002 -1458 6 741 365 322 49 0 chr15 20457716 20457859 -83037115 - Lx6 LINE L1 -26 7434 7285 6 741 1790 207 48 38 chr15 20457860 20458277 -83036697 - MTC LTR MaLR 0 421 1 6 741 323 177 62 25 chr15 20458277 20458358 -83036616 - MTC-int LTR MaLR 0 1258 1175 6 741 259 257 7 0 chr15 20458423 20458577 -83036397 + GA-rich Low_complexity Low_complexity 1 155 0 6 741 418 362 54 38 chr15 20458890 20459203 -83035771 - MT2A LTR ERVL -1 532 215 6 741 525 32 0 0 chr15 20459205 20459268 -83035706 + (GA)n Simple_repeat Simple_repeat 2 64 0 6 741 4143 107 10 14 chr15 20459557 20460182 -83034792 - L1_Mus3 LINE L1 -18 6620 5999 6 741 638 121 0 0 chr15 20460541 20460640 -83034334 - L1_Mus3 LINE L1 -300 6338 6240 6 741 231 292 0 14 chr15 20460640 20460713 -83034261 + RLTR40 LTR ERVK 227 298 -519 6 741 333 295 179 32 chr15 20460742 20461050 -83033924 + Lx8 LINE L1 7119 7471 -2 6 741 40613 11 0 6 chr15 20461106 20467517 -83027457 - L1Md_A LINE L1 0 6582 215 6 741 1046 135 0 6 chr15 20468285 20468464 -83026510 + (TTTCC)n Simple_repeat Simple_repeat 3 180 0 6 741 29 28 0 0 chr15 20469730 20469766 -83025208 + AT_rich Low_complexity Low_complexity 1 36 0 6 741 266 286 0 0 chr15 20469826 20469889 -83025085 + B1F SINE Alu 67 129 -20 6 741 4010 214 37 22 chr15 20469951 20470851 -83024123 - Lx5 LINE L1 -1 7049 6137 6 741 2156 169 0 0 chr15 20470848 20471210 -83023764 + Lx5 LINE L1 5632 5993 -1057 6 741 261 0 0 0 chr15 20471219 20471248 -83023726 + (TAA)n Simple_repeat Simple_repeat 3 31 0 6 741 226 310 118 72 chr15 20471460 20471613 -83023361 + MLT1F2 LTR MaLR 101 260 -300 6 741 4045 55 2 2 chr15 20472283 20472793 -83022181 + L1Md_F2 LINE L1 6073 6582 0 6 741 3215 156 37 3 chr15 20473944 20474517 -83020457 + Lx2 LINE L1 6404 6995 -2 6 741 26 0 0 0 chr15 20474635 20474661 -83020313 + AT_rich Low_complexity Low_complexity 1 26 0 6 741 332 202 37 122 chr15 20474909 20475016 -83019958 - RSINE1 SINE B4 -19 146 49 6 741 1482 203 111 15 chr15 20477948 20478273 -83016701 + ORR1B1 LTR MaLR 31 386 -8 6 741 1757 268 51 68 chr15 20478615 20479323 -83015651 - Lx7 LINE L1 -19 7677 6982 6 741 537 179 8 31 chr15 20479502 20479629 -83015345 - Lx9 LINE L1 -8 7636 7513 6 741 636 72 0 0 chr15 20480534 20480631 -83014343 + L1_Mus1 LINE L1 6470 6566 -1 6 741 16518 113 15 9 chr15 20481212 20484372 -83010602 - L1_Mus2 LINE L1 -56 6510 3334 6 741 180 0 0 0 chr15 20484565 20484585 -83010389 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 741 26 0 0 0 chr15 20484789 20484815 -83010159 + AT_rich Low_complexity Low_complexity 1 26 0 6 741 3199 106 52 8 chr15 20485857 20486371 -83008603 + L1_Mus4 LINE L1 5593 6129 -507 6 741 531 328 16 11 chr15 20487101 20487289 -83007685 - MTEb LTR MaLR -185 194 6 6 741 504 0 0 0 chr15 20487429 20487485 -83007489 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 741 1141 75 0 0 chr15 20487485 20487631 -83007343 - B1_Mus2 SINE Alu -1 146 1 6 741 315 0 0 0 chr15 20488245 20488280 -83006694 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 741 589 272 38 69 chr15 20488403 20488664 -83006310 - RMER6D LTR ERVK -39 717 487 6 741 5468 82 6 0 chr15 20488669 20489392 -83005582 - L1_Mus1 LINE L1 0 6567 5841 6 741 3065 76 13 0 chr15 20489392 20489789 -83005185 + L1_Mus1 LINE L1 5414 5815 -68 6 741 2124 186 131 35 chr15 20489789 20490369 -83004605 - RMER6C LTR ERVK -54 636 1 6 741 1793 86 4 55 chr15 20490496 20490767 -83004207 - L1_Mus2 LINE L1 -145 6421 6165 6 741 24 77 0 0 chr15 20491379 20491431 -83003543 + AT_rich Low_complexity Low_complexity 1 52 0 6 741 23 54 0 0 chr15 20491875 20491912 -83003062 + AT_rich Low_complexity Low_complexity 1 37 0 6 741 29 28 0 0 chr15 20492562 20492598 -83002376 + AT_rich Low_complexity Low_complexity 1 36 0 6 741 22 0 0 0 chr15 20493077 20493099 -83001875 + AT_rich Low_complexity Low_complexity 1 22 0 6 741 756 307 117 37 chr15 20493284 20493654 -83001320 - MTD LTR MaLR -15 404 14 6 741 213 114 0 28 chr15 20493703 20493739 -83001235 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 741 404 183 67 9 chr15 20494126 20494231 -83000743 - Lx2 LINE L1 0 6997 6887 6 741 1411 128 70 0 chr15 20494226 20494469 -83000505 + Lx2 LINE L1 5928 6187 -810 6 741 466 319 0 22 chr15 20495147 20495285 -82999689 - B1_Mur3 SINE Alu -9 140 6 6 741 22 35 0 0 chr15 20496020 20496049 -82998925 + AT_rich Low_complexity Low_complexity 1 29 0 6 741 279 114 0 0 chr15 20496091 20496135 -82998839 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 741 306 363 138 44 chr15 20497981 20498344 -82996630 + MLT2D LTR ERVL 18 414 0 6 741 617 38 0 12 chr15 20498557 20498638 -82996336 + (GAAAA)n Simple_repeat Simple_repeat 4 83 0 6 741 1519 158 66 0 chr15 20498724 20499028 -82995946 + Lx3A LINE L1 6650 6973 -8 6 741 27 49 0 0 chr15 20499028 20499069 -82995905 + AT_rich Low_complexity Low_complexity 1 41 0 6 741 180 97 0 0 chr15 20499181 20499212 -82995762 + (CTTG)n Simple_repeat Simple_repeat 2 32 0 6 741 197 146 0 20 chr15 20499246 20499295 -82995679 + T-rich Low_complexity Low_complexity 2 49 0 6 741 618 26 0 0 chr15 20500568 20500644 -82994330 + (TG)n Simple_repeat Simple_repeat 2 77 0 1 741 425 220 46 0 chr15 20502071 20502180 -82992794 - B3 SINE B2 0 216 103 2 741 23 78 0 0 chr15 20503284 20503335 -82991639 + AT_rich Low_complexity Low_complexity 1 51 0 3 741 219 291 56 37 chr15 20504589 20504696 -82990278 + L3b LINE CR1 122 230 -252 4 741 196 349 46 38 chr15 20505214 20505345 -82989629 + L2a LINE L2 3278 3409 -17 5 741 215 167 21 0 chr15 20505958 20506006 -82988968 + A-rich Low_complexity Low_complexity 1 49 0 6 741 5025 80 6 11 chr15 20506068 20506762 -82988212 + L1Md_F2 LINE L1 5880 6569 -13 7 741 623 240 124 5 chr15 20507155 20507356 -82987618 + Lx2B LINE L1 6776 7000 0 8 741 22 80 0 0 chr15 20507369 20507419 -82987555 + AT_rich Low_complexity Low_complexity 1 50 0 9 741 963 151 5 45 chr15 20507683 20507884 -82987090 - Lx LINE L1 -4 6650 6458 1 741 446 271 28 6 chr15 20507892 20508070 -82986904 + MTC-int LTR MaLR 1057 1238 -20 1 741 563 242 0 0 chr15 20508478 20508598 -82986376 - ORR1D1 LTR MaLR -254 120 1 1 741 2391 42 0 0 chr15 20509066 20509355 -82985619 + L1Md_A LINE L1 6293 6581 -1 1 741 519 60 0 0 chr15 20511042 20511109 -82983865 + (TA)n Simple_repeat Simple_repeat 1 67 0 1 741 218 305 9 0 chr15 20511124 20511229 -82983745 + (TA)n Simple_repeat Simple_repeat 2 107 0 1 741 26 30 0 0 chr15 20511232 20511265 -82983709 + AT_rich Low_complexity Low_complexity 1 33 0 1 741 21 0 0 0 chr15 20513417 20513438 -82981536 + AT_rich Low_complexity Low_complexity 1 21 0 1 741 1108 101 11 6 chr15 20513797 20514159 -82980815 + (TG)n Simple_repeat Simple_repeat 1 364 0 1 741 347 328 59 66 chr15 20514253 20514524 -82980450 - MLT2B4 LTR ERVL -201 355 87 1 741 183 129 0 0 chr15 20514761 20514792 -82980182 + (CTTG)n Simple_repeat Simple_repeat 1 31 0 1 741 860 129 98 0 chr15 20514792 20514924 -82980050 - B1_Mur4 SINE Alu -2 148 4 2 741 509 0 16 0 chr15 20515404 20515465 -82979509 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 2 741 249 265 0 0 chr15 20515505 20515588 -82979386 + CT-rich Low_complexity Low_complexity 5 87 0 2 741 27 49 0 0 chr15 20515810 20515851 -82979123 + AT_rich Low_complexity Low_complexity 1 41 0 2 741 21 0 0 0 chr15 20516028 20516049 -82978925 + AT_rich Low_complexity Low_complexity 1 21 0 2 741 22 56 0 0 chr15 20516135 20516171 -82978803 + AT_rich Low_complexity Low_complexity 1 36 0 2 741 1734 214 85 18 chr15 20516963 20517525 -82977449 - Lx3C LINE L1 -1 6999 6350 2 741 4585 176 10 7 chr15 20517531 20518683 -82976291 + Lx3C LINE L1 5072 6219 -757 2 741 331 87 0 0 chr15 20518680 20518726 -82976248 - Lx2B LINE L1 -149 6851 6806 2 741 556 302 78 48 chr15 20518994 20519289 -82975685 + Lx6 LINE L1 6980 7283 -177 2 741 251 275 138 0 chr15 20519365 20519445 -82975529 + Lx7 LINE L1 7206 7296 -400 3 741 1079 170 27 0 chr15 20519455 20519643 -82975331 + MTC LTR MaLR 148 340 -81 3 741 2785 131 7 13 chr15 20519812 20520268 -82974706 + Lx3A LINE L1 6522 6974 -7 3 741 21 0 0 0 chr15 20520269 20520290 -82974684 + AT_rich Low_complexity Low_complexity 1 21 0 3 741 2708 67 0 13 chr15 20521979 20522355 -82972619 - L1Md_F2 LINE L1 0 6582 6212 3 741 2724 63 3 6 chr15 20522474 20522840 -82972134 - MTA_Mm LTR MaLR -31 365 1 3 741 736 264 56 9 chr15 20523254 20523468 -82971506 - Lx7 LINE L1 -844 6852 6629 3 741 2250 247 69 50 chr15 20523463 20524244 -82970730 + Lx7 LINE L1 6901 7696 0 3 741 27 29 0 0 chr15 20524313 20524347 -82970627 + AT_rich Low_complexity Low_complexity 1 34 0 3 741 3939 36 2 6 chr15 20524348 20524825 -82970149 - L1Md_F2 LINE L1 -2 6580 6106 3 741 4549 21 0 0 chr15 20524825 20525466 -82969508 + L1Md_F2 LINE L1 5357 5997 -585 3 741 2452 194 2 9 chr15 20525519 20525971 -82969003 - Lx4B LINE L1 -428 6630 6182 3 741 25 51 0 0 chr15 20526574 20526613 -82968361 + AT_rich Low_complexity Low_complexity 1 39 0 4 741 313 284 24 87 chr15 20526613 20526740 -82968234 - RSINE1 SINE B4 -43 122 4 4 741 8436 28 0 0 chr15 20526966 20528134 -82966840 - L1Md_T LINE L1 0 6582 5415 4 741 342 67 0 0 chr15 20528170 20528215 -82966759 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 741 652 280 25 31 chr15 20528215 20528377 -82966597 - B3 SINE B2 -53 163 3 4 741 26 0 0 0 chr15 20528383 20528409 -82966565 + AT_rich Low_complexity Low_complexity 1 26 0 4 741 296 284 17 17 chr15 20530526 20530644 -82964330 - MER77 LTR ERVL -19 588 471 4 741 243 0 0 0 chr15 20533524 20533551 -82961423 + (TAA)n Simple_repeat Simple_repeat 2 28 0 4 741 447 319 13 65 chr15 20533894 20534048 -82960926 - B1F SINE Alu 0 149 4 4 741 1326 278 92 20 chr15 20534182 20534627 -82960347 - Lx9 LINE L1 -694 6950 6474 4 741 247 287 58 14 chr15 20534626 20534764 -82960210 + Lx9 LINE L1 5900 6043 -1601 5 741 279 203 0 0 chr15 20534846 20534905 -82960069 + (TATATG)n Simple_repeat Simple_repeat 1 59 0 5 741 384 138 0 0 chr15 20535173 20535238 -82959736 + (AGGGGG)n Simple_repeat Simple_repeat 1 65 0 5 741 3820 152 95 103 chr15 20535238 20535628 -82959346 + Lx3C LINE L1 5999 6386 -590 5 741 3524 101 9 24 chr15 20535628 20536176 -82958798 + Lx LINE L1 6115 6654 0 5 741 3820 152 95 103 chr15 20536176 20536762 -82958212 + Lx3C LINE L1 6387 6967 -9 5 741 8001 45 3 2 chr15 20536858 20538534 -82956440 - L1Md_F2 LINE L1 -1 6581 4905 5 741 6052 49 1 0 chr15 20538519 20539277 -82955697 + L1Md_F2 LINE L1 4176 4934 -949 5 741 295 296 62 0 chr15 20540325 20540406 -82954568 - RMER15 LTR ERVL -6 569 484 5 741 346 326 66 56 chr15 20540416 20540614 -82954360 - RMER15 LTR ERVL -349 226 27 5 741 4471 88 3 2 chr15 20540672 20541275 -82953699 + L1_Mus3 LINE L1 6028 6631 -7 5 741 240 35 0 0 chr15 20542953 20542982 -82951992 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 741 4543 142 27 3 chr15 20543059 20543807 -82951167 + Lx2 LINE L1 6232 6997 0 5 741 984 18 0 0 chr15 20544194 20544308 -82950666 + (TG)n Simple_repeat Simple_repeat 1 114 0 6 741 1044 62 0 0 chr15 20544692 20544822 -82950152 - B1_Mus1 SINE Alu -18 130 1 6 741 285 29 0 0 chr15 20545468 20545502 -82949472 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 741 380 280 8 15 chr15 20546713 20546847 -82948127 - Lx9 LINE L1 -230 7414 7282 6 741 779 118 0 7 chr15 20546890 20547026 -82947948 + (TTCC)n Simple_repeat Simple_repeat 1 135 0 6 741 814 59 34 0 chr15 20547026 20547145 -82947829 + (TTTC)n Simple_repeat Simple_repeat 4 126 0 6 741 2927 186 60 54 chr15 20547407 20547845 -82947129 - L1_Mur3 LINE L1 -717 5163 4746 6 741 453 19 0 0 chr15 20547845 20547899 -82947075 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 741 2927 186 60 54 chr15 20547899 20548008 -82946966 - L1_Mur3 LINE L1 -1135 4745 4624 6 741 192 40 0 0 chr15 20548008 20548033 -82946941 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 741 2927 186 60 54 chr15 20548033 20548263 -82946711 - L1_Mur3 LINE L1 -1257 4623 4381 6 741 405 0 0 0 chr15 20548340 20548385 -82946589 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 741 377 178 65 9 chr15 20548387 20548495 -82946479 - L1_Mur3 LINE L1 -3823 2057 1944 6 741 360 250 0 0 chr15 20548485 20548553 -82946421 - L1_Mur3 LINE L1 -7364 364 297 6 741 16923 10 0 0 chr15 20549745 20551697 -82943277 - L1_Mm LINE L1 -1250 4633 2682 7 741 8290 18 0 0 chr15 20551695 20552637 -82942337 + L1_Mm LINE L1 4645 5586 -297 7 741 8819 11 1 0 chr15 20552637 20553632 -82941342 + L1Md_A LINE L1 5587 6582 0 7 741 8290 18 0 0 chr15 20553632 20553646 -82941328 + L1_Mm LINE L1 5587 5600 -283 7 741 3740 51 0 6 chr15 20554227 20554700 -82940274 - L1Md_F2 LINE L1 -8 6574 6105 7 741 1956 196 26 128 chr15 20555121 20555268 -82939706 - RMER1C Other Other -12 1330 1223 7 741 846 47 0 0 chr15 20555268 20555375 -82939599 + (GAA)n Simple_repeat Simple_repeat 2 108 0 7 741 1956 196 26 128 chr15 20555375 20555805 -82939169 - RMER1C Other Other -120 1222 812 7 741 312 367 31 0 chr15 20555993 20556121 -82938853 + MER2B DNA MER2_type 174 305 -31 7 741 216 0 0 0 chr15 20556218 20556242 -82938732 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 7 741 326 325 8 34 chr15 20557038 20557156 -82937818 + RSINE1 SINE B4 14 128 -37 7 741 2373 84 29 6 chr15 20557326 20557673 -82937301 - L1_Mus3 LINE L1 0 6638 6284 7 741 6642 50 7 8 chr15 20559004 20559833 -82935141 + L1Md_F2 LINE L1 5735 6562 -20 7 741 450 0 0 0 chr15 20560761 20560811 -82934163 + (TA)n Simple_repeat Simple_repeat 2 51 0 8 741 273 264 59 99 chr15 20562567 20562668 -82932306 - RMER5 LTR ERV1 -4 530 434 8 741 248 0 31 0 chr15 20562675 20562707 -82932267 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 8 741 2336 154 37 0 chr15 20562744 20563154 -82931820 + Lx LINE L1 6219 6643 -11 8 741 288 0 0 0 chr15 20563216 20563248 -82931726 + (TC)n Simple_repeat Simple_repeat 2 33 0 8 741 420 20 0 0 chr15 20563248 20563296 -82931678 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 741 447 234 112 0 chr15 20563628 20563735 -82931239 - B1_Mus2 SINE Alu -2 145 27 8 741 390 127 0 0 chr15 20564870 20564941 -82930033 + (TG)n Simple_repeat Simple_repeat 2 72 0 8 741 36 40 0 0 chr15 20565020 20565070 -82929904 + AT_rich Low_complexity Low_complexity 1 50 0 8 741 812 143 202 45 chr15 20565073 20565271 -82929703 - Lx3A LINE L1 0 6981 6753 8 741 485 329 94 0 chr15 20565271 20565420 -82929554 - B4 SINE B4 -129 163 1 9 741 561 191 2 37 chr15 20565542 20565711 -82929263 - URR1B DNA MER1_type 0 225 70 9 741 426 370 9 3 chr15 20565943 20566101 -82928873 - B3 SINE B2 -39 159 2 9 741 492 324 62 18 chr15 20566198 20566378 -82928596 + B3A SINE B2 20 205 -11 9 741 293 43 43 0 chr15 20566381 20566427 -82928547 + (CAGA)n Simple_repeat Simple_repeat 2 49 0 9 741 752 213 0 6 chr15 20566489 20566645 -82928329 - ORR1A4 LTR MaLR -174 155 1 9 741 503 285 32 16 chr15 20566667 20566917 -82928057 + L1MB8 LINE L1 5689 5942 -236 9 741 1725 266 10 12 chr15 20567091 20567509 -82927465 - MTC LTR MaLR 0 421 5 9 741 1772 204 77 135 chr15 20570049 20570781 -82924193 - RMER6C LTR ERVK 0 690 2 9 741 274 296 37 0 chr15 20571259 20571340 -82923634 + ID_B1 SINE B4 133 216 -8 9 741 25 0 0 0 chr15 20571948 20571973 -82923001 + AT_rich Low_complexity Low_complexity 1 25 0 1 741 300 236 78 16 chr15 20572476 20572605 -82922369 + L1M2 LINE L1 3073 3209 -2934 1 741 1367 125 40 0 chr15 20573173 20573397 -82921577 - Lx2 LINE L1 0 6997 6765 1 741 3784 135 8 12 chr15 20573397 20573996 -82920978 - Lx2 LINE L1 -363 6634 6038 1 741 1941 238 71 10 chr15 20573996 20574505 -82920469 - RMER19C LTR ERVK -22 589 50 1 741 663 165 0 0 chr15 20574871 20575175 -82919799 + (TG)n Simple_repeat Simple_repeat 1 304 0 1 741 395 149 0 9 chr15 20575219 20575327 -82919647 + (TG)n Simple_repeat Simple_repeat 2 108 0 1 741 297 0 0 0 chr15 20575458 20575491 -82919483 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 741 231 88 0 0 chr15 20575492 20575526 -82919448 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 741 8018 49 9 0 chr15 20575526 20576895 -82918079 - L1Md_F3 LINE L1 -4 6580 5200 1 741 206 215 12 48 chr15 20577583 20577666 -82917308 + (TAAA)n Simple_repeat Simple_repeat 2 81 0 1 741 594 291 25 0 chr15 20577681 20577877 -82917097 - Lx7 LINE L1 -358 7338 7138 1 741 1571 221 80 26 chr15 20577906 20578296 -82916678 - Lx4B LINE L1 -6 7052 6642 1 92 1466 180 65 19 chr15 20578300 20578622 -82916352 - Lx4B LINE L1 -718 6340 6004 1 742 1810 97 10 65 chr15 20578623 20578933 -82916041 - L1Md_F2 LINE L1 -2 6580 6288 1 742 387 0 0 0 chr15 20579099 20579142 -82915832 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 742 319 335 124 54 chr15 20579581 20579767 -82915207 + B3 SINE B2 3 201 -15 1 742 32 26 0 0 chr15 20581085 20581124 -82913850 + AT_rich Low_complexity Low_complexity 1 39 0 1 742 2046 151 15 0 chr15 20581192 20581530 -82913444 + Lx4B LINE L1 5669 6011 -1047 1 742 1053 76 0 0 chr15 20581528 20581673 -82913301 + L1_Mm LINE L1 5109 5253 -630 1 742 31179 84 9 8 chr15 20581672 20587070 -82907904 + L1Md_F2 LINE L1 184 5586 -297 1 742 7892 58 3 0 chr15 20587070 20588063 -82906911 + L1Md_F2 LINE L1 5587 6582 0 1 742 2870 117 0 0 chr15 20588063 20588473 -82906501 + L1_Mm LINE L1 5249 5658 -225 1 742 1629 96 0 12 chr15 20588473 20588715 -82906259 + L1Md_F2 LINE L1 6342 6580 -2 1 742 1238 224 55 55 chr15 20589829 20590186 -82904788 + RMER19A LTR ERVK 4 417 -320 1 742 1573 165 142 15 chr15 20590142 20590540 -82904434 - ORR1B1-int LTR MaLR -41 1468 933 1 742 1192 248 44 99 chr15 20590540 20590993 -82903981 - RLTR23 LTR ERV1 0 430 3 1 742 5366 176 47 52 chr15 20591012 20592176 -82902798 - ORR1A1-int LTR MaLR -360 1603 446 1 742 523 0 30 0 chr15 20592290 20592357 -82902617 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 742 336 24 0 0 chr15 20592847 20592888 -82902086 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 742 2651 84 3 0 chr15 20593316 20593661 -82901313 - ORR1A1 LTR MaLR 0 346 1 1 742 22 56 0 0 chr15 20594244 20594280 -82900694 + AT_rich Low_complexity Low_complexity 1 36 0 1 742 371 264 98 64 chr15 20594606 20594841 -82900133 + Lx8 LINE L1 7211 7453 -20 1 742 33 0 0 0 chr15 20594986 20595019 -82899955 + AT_rich Low_complexity Low_complexity 1 33 0 1 742 362 402 8 0 chr15 20596852 20596974 -82898000 - RSINE1 SINE B4 -40 125 3 1 742 372 22 0 0 chr15 20597478 20597523 -82897451 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 742 315 252 28 83 chr15 20597655 20597723 -82897251 - HAL1-3A_ME LINE L1 -782 2076 2013 1 742 441 0 0 0 chr15 20597723 20597772 -82897202 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 742 315 252 28 83 chr15 20597772 20597811 -82897163 - HAL1-3A_ME LINE L1 -846 2012 1975 1 742 445 316 23 14 chr15 20598151 20598372 -82896602 + L1_Mur3 LINE L1 4966 5188 -692 1 742 272 250 0 12 chr15 20598392 20598477 -82896497 - Lx9 LINE L1 -5 7639 7556 1 742 36 0 0 0 chr15 20598477 20598513 -82896461 + AT_rich Low_complexity Low_complexity 1 36 0 1 742 22 35 0 0 chr15 20598928 20598957 -82896017 + AT_rich Low_complexity Low_complexity 1 29 0 1 742 21 57 0 0 chr15 20599150 20599185 -82895789 + AT_rich Low_complexity Low_complexity 1 35 0 1 742 763 79 67 0 chr15 20599504 20599668 -82895306 + (TTC)n Simple_repeat Simple_repeat 2 176 0 1 742 415 200 0 62 chr15 20599669 20599768 -82895206 + polypyrimidine Low_complexity Low_complexity 14 107 0 1 742 1082 125 6 0 chr15 20599768 20599944 -82895030 + (TTCTCC)n Simple_repeat Simple_repeat 4 180 0 1 742 415 200 0 62 chr15 20599944 20599956 -82895018 + polypyrimidine Low_complexity Low_complexity 3 13 0 1 742 30 83 0 0 chr15 20600309 20600381 -82894593 + AT_rich Low_complexity Low_complexity 1 72 0 1 742 284 330 78 68 chr15 20600703 20600866 -82894108 + B3 SINE B2 1 166 -29 1 742 384 22 0 0 chr15 20600866 20600911 -82894063 + (TC)n Simple_repeat Simple_repeat 1 45 0 1 742 333 0 0 0 chr15 20600911 20600947 -82894027 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 742 238 330 78 68 chr15 20600947 20600974 -82894000 + B2_Mm2 SINE B2 167 193 -2 1 742 29 0 0 0 chr15 20602060 20602089 -82892885 + AT_rich Low_complexity Low_complexity 1 29 0 1 742 2460 220 111 11 chr15 20602943 20603504 -82891470 - RMER20B LTR ERVK -3 624 8 1 742 235 291 67 17 chr15 20603498 20603617 -82891357 + MLT1D LTR MaLR 381 505 0 1 742 32 0 0 0 chr15 20606386 20606418 -82888556 + AT_rich Low_complexity Low_complexity 1 32 0 1 742 9540 106 20 9 chr15 20606680 20607767 -82887207 - Lx3_Mus LINE L1 0 7009 5909 1 742 328 55 18 18 chr15 20607767 20607823 -82887151 + (TTG)n Simple_repeat Simple_repeat 2 57 0 1 742 180 0 0 0 chr15 20607823 20607843 -82887131 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1 742 9540 89 2 4 chr15 20607843 20608704 -82886270 - Lx3_Mus LINE L1 -1101 5908 5051 1 742 240 312 128 88 chr15 20609976 20610398 -82884576 - L2 LINE L2 -738 2681 2243 1 742 293 0 27 0 chr15 20611198 20611235 -82883739 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 742 252 0 0 0 chr15 20611318 20611346 -82883628 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 742 330 317 28 19 chr15 20612190 20612296 -82882678 - ID_B1 SINE B4 -1 223 117 1 742 1095 276 66 109 chr15 20612869 20613012 -82881962 + RMER12 LTR ERVK 15 163 -1241 1 742 2074 100 0 0 chr15 20613012 20613302 -82881672 - L1_Mus4 LINE L1 -12 6624 6335 1 742 1817 190 14 24 chr15 20613302 20613690 -82881284 + RMER12 LTR ERVK 122 523 -881 1 742 466 325 18 65 chr15 20613731 20613948 -82881026 + RMER12 LTR ERVK 938 1144 -178 1 742 233 300 158 15 chr15 20613985 20614188 -82880786 + RLTR21 LTR ERVK 1341 1572 0 1 742 35 41 0 0 chr15 20614657 20614706 -82880268 + AT_rich Low_complexity Low_complexity 1 49 0 1 742 7260 77 16 2 chr15 20615429 20616506 -82878468 - L1Md_F2 LINE L1 -12 6570 5480 1 742 11665 75 2 1 chr15 20616506 20617309 -82877665 + L1_Mm LINE L1 3931 4734 -1149 1 742 216 0 0 0 chr15 20617309 20617333 -82877641 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 742 11665 75 2 1 chr15 20617333 20618088 -82876886 + L1_Mm LINE L1 4735 5490 -393 1 742 29 0 0 0 chr15 20618392 20618421 -82876553 + AT_rich Low_complexity Low_complexity 1 29 0 1 742 949 118 0 66 chr15 20618524 20618705 -82876269 - L1Md_F2 LINE L1 -12 6570 6402 1 742 1196 335 54 9 chr15 20618907 20619467 -82875507 - Lx8 LINE L1 -561 6912 6328 1 742 21 89 0 0 chr15 20619468 20619524 -82875450 + AT_rich Low_complexity Low_complexity 1 56 0 1 742 243 173 0 0 chr15 20620760 20620812 -82874162 + (CATA)n Simple_repeat Simple_repeat 2 53 0 1 742 731 358 20 47 chr15 20623194 20623493 -82871481 - B4A SINE B4 0 292 2 1 742 2483 189 10 19 chr15 20623636 20624121 -82870853 - Lx2B LINE L1 -15 6985 6505 1 742 1032 8 0 0 chr15 20625189 20625306 -82869668 + (GAA)n Simple_repeat Simple_repeat 3 119 0 1 742 22 0 0 0 chr15 20626291 20626313 -82868661 + AT_rich Low_complexity Low_complexity 1 22 0 1 742 240 343 30 0 chr15 20626324 20626423 -82868551 + PB1D10 SINE Alu 5 106 -11 1 742 34 0 0 0 chr15 20626756 20626790 -82868184 + AT_rich Low_complexity Low_complexity 1 34 0 1 742 276 330 111 24 chr15 20626936 20627048 -82867926 - Lx9 LINE L1 -446 7198 7085 1 742 504 0 0 0 chr15 20627048 20627104 -82867870 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 742 276 330 111 24 chr15 20627104 20627199 -82867775 - Lx9 LINE L1 -560 7084 6974 1 742 464 0 18 0 chr15 20627203 20627259 -82867715 + (GA)n Simple_repeat Simple_repeat 1 57 0 1 742 294 130 49 49 chr15 20627415 20627577 -82867397 + (TCTA)n Simple_repeat Simple_repeat 4 165 0 1 742 203 208 21 0 chr15 20627581 20627629 -82867345 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 1 742 240 86 0 0 chr15 20627675 20627710 -82867264 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 742 379 352 137 56 chr15 20627735 20628238 -82866736 + Lx9 LINE L1 6426 6969 -675 1 742 330 26 0 0 chr15 20628500 20628539 -82866435 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 742 324 0 0 0 chr15 20628539 20628574 -82866400 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 742 290 200 33 0 chr15 20628609 20628669 -82866305 - ORR1B1 LTR MaLR -1 393 332 1 742 608 148 26 0 chr15 20628672 20628787 -82866187 - Lx2A LINE L1 -7 7001 6884 1 742 777 76 0 0 chr15 20628806 20628911 -82866063 + (TCTA)n Simple_repeat Simple_repeat 1 105 0 1 742 5916 194 63 31 chr15 20628912 20630631 -82864343 - Lx4B LINE L1 -22 7036 5253 1 742 1219 228 30 87 chr15 20630643 20630975 -82863999 - ORR1B1 LTR MaLR -41 353 41 1 742 208 53 53 0 chr15 20631124 20631162 -82863812 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 1 742 914 142 0 7 chr15 20631162 20631311 -82863663 - B1_Mus1 SINE Alu 0 148 1 1 742 225 0 0 0 chr15 20631333 20631358 -82863616 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 742 1056 18 73 0 chr15 20631367 20631532 -82863442 + (CAGAGA)n Simple_repeat Simple_repeat 2 178 0 1 742 948 112 0 0 chr15 20631532 20631656 -82863318 - B1_Mus1 SINE Alu -21 127 4 1 742 192 217 0 0 chr15 20631709 20631755 -82863219 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 742 246 324 19 0 chr15 20632109 20632217 -82862757 - L1M4 LINE L1 -1156 4990 4881 1 742 437 350 138 16 chr15 20632509 20632959 -82862015 - L1M4 LINE L1 -1338 4808 4304 1 742 1088 89 7 0 chr15 20633327 20633473 -82861501 - B1_Mus2 SINE Alu 0 147 1 1 742 21 36 0 0 chr15 20633530 20633558 -82861416 + AT_rich Low_complexity Low_complexity 1 28 0 1 742 506 16 16 0 chr15 20633836 20633899 -82861075 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 1 742 516 328 113 12 chr15 20634538 20634794 -82860180 + MTEb LTR MaLR 1 282 -97 1 742 249 210 0 0 chr15 20636280 20636342 -82858632 + CT-rich Low_complexity Low_complexity 3 64 0 1 742 2261 290 89 15 chr15 20636384 20637102 -82857872 - Lx6 LINE L1 -64 7396 6626 2 742 3762 157 63 14 chr15 20638169 20638872 -82856102 + Lx2B LINE L1 6261 6997 -3 2 742 240 231 0 0 chr15 20639561 20639613 -82855361 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 742 420 314 108 8 chr15 20639768 20640009 -82854965 - L1MA4 LINE L1 -359 5941 5677 2 742 1492 207 15 36 chr15 20640430 20640761 -82854213 - ORR1A3 LTR MaLR 0 326 3 2 742 6829 82 40 40 chr15 20642512 20643697 -82851277 - L1_Mus1 LINE L1 0 6567 5383 2 742 8594 110 2 0 chr15 20643695 20644952 -82850022 + L1_Mm LINE L1 3697 4955 -928 2 742 13126 69 2 1 chr15 20644952 20646703 -82848271 - L1_Mus1 LINE L1 -1098 4785 3034 2 742 380 232 0 6 chr15 20648874 20649052 -82845922 + CT-rich Low_complexity Low_complexity 2 178 0 2 742 275 244 121 12 chr15 20649164 20649247 -82845727 + RMER10A LTR ERVL 321 412 -30 2 742 21 0 0 0 chr15 20649946 20649967 -82845007 + AT_rich Low_complexity Low_complexity 1 21 0 2 742 21 36 0 0 chr15 20650908 20650936 -82844038 + AT_rich Low_complexity Low_complexity 1 28 0 2 742 191 371 113 50 chr15 20651151 20651574 -82843400 + L2 LINE L2 1708 2157 -1262 2 742 192 228 0 0 chr15 20651654 20651711 -82843263 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 742 298 0 48 0 chr15 20652581 20652623 -82842351 + (TTG)n Simple_repeat Simple_repeat 2 45 0 2 742 1541 105 12 8 chr15 20654713 20654962 -82840012 - L1_Mus3 LINE L1 -1 6637 6388 2 742 1051 58 0 0 chr15 20654962 20655099 -82839875 + B1_Mm SINE Alu 8 144 -3 2 742 4202 99 41 3 chr15 20655099 20655708 -82839266 - L1_Mus3 LINE L1 -250 6388 5757 2 742 21 36 0 0 chr15 20655708 20655736 -82839238 + AT_rich Low_complexity Low_complexity 1 28 0 2 742 541 220 117 34 chr15 20655792 20655971 -82839003 + B2_Mm2 SINE B2 2 195 0 2 742 21 0 0 0 chr15 20656038 20656059 -82838915 + AT_rich Low_complexity Low_complexity 1 21 0 2 742 260 288 64 72 chr15 20656887 20657123 -82837851 + L1_Mur3 LINE L1 3921 4154 -1726 2 742 291 245 32 11 chr15 20657173 20657268 -82837706 + L1_Mur3 LINE L1 5297 5393 -487 2 742 869 326 86 7 chr15 20657263 20657665 -82837309 + Lx6 LINE L1 6544 7333 -127 2 742 441 0 0 0 chr15 20657718 20657767 -82837207 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 2 742 720 150 0 0 chr15 20657767 20657927 -82837047 + (TA)n Simple_repeat Simple_repeat 2 161 0 2 742 966 315 24 5 chr15 20658050 20658468 -82836506 + L1MA6 LINE L1 5511 5936 -364 2 742 393 22 0 0 chr15 20658468 20658514 -82836460 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 742 1542 324 82 12 chr15 20659785 20660447 -82834527 - Lx8 LINE L1 -5 7468 6760 2 742 186 43 0 0 chr15 20660447 20660470 -82834504 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2 742 1542 324 82 12 chr15 20660470 20660562 -82834412 - Lx8 LINE L1 -714 6759 6661 2 742 4445 64 2 12 chr15 20661293 20661882 -82833092 - L1Md_F2 LINE L1 -13 6569 5987 2 742 3801 56 0 0 chr15 20661885 20662350 -82832624 - L1_Mm LINE L1 -11 5872 5408 2 742 387 0 0 0 chr15 20663293 20663336 -82831638 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 2 742 571 188 7 59 chr15 20663454 20663607 -82831367 + ORR1C2 LTR MaLR 5 134 -250 2 742 2947 268 94 65 chr15 20664035 20665254 -82829720 - Lx7 LINE L1 -16 7680 6426 2 742 633 293 16 10 chr15 20665251 20665444 -82829530 - Lx6 LINE L1 -1097 6363 6170 2 742 3599 176 106 49 chr15 20665420 20666335 -82828639 - L1_Mur3 LINE L1 -2930 2950 1984 2 742 1363 236 87 8 chr15 20666537 20666714 -82828260 + ORR1C2 LTR MaLR 3 171 -213 2 742 537 16 0 0 chr15 20666714 20666776 -82828198 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 742 1363 232 92 6 chr15 20666776 20666955 -82828019 + ORR1C2 LTR MaLR 172 368 -16 2 742 1799 157 29 6 chr15 20668372 20668687 -82826287 - Lx3A LINE L1 -7 6974 6653 2 742 533 300 81 54 chr15 20668863 20669085 -82825889 + B4A SINE B4 65 292 0 2 742 288 77 0 0 chr15 20670350 20670389 -82824585 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2 742 1087 82 0 7 chr15 20670400 20670547 -82824427 - B1_Mus1 SINE Alu -2 146 1 2 742 229 250 0 0 chr15 20670676 20670736 -82824238 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 742 210 143 0 0 chr15 20671412 20671447 -82823527 + (CATA)n Simple_repeat Simple_repeat 2 36 0 2 742 30 69 0 0 chr15 20671466 20671524 -82823450 + AT_rich Low_complexity Low_complexity 1 58 0 2 742 279 313 172 15 chr15 20672027 20672225 -82822749 - L3 LINE CR1 -557 3932 3704 2 742 189 0 0 0 chr15 20672286 20672307 -82822667 + (T)n Simple_repeat Simple_repeat 1 21 0 2 742 762 333 46 19 chr15 20673128 20673544 -82821430 - Lx8 LINE L1 -136 7337 6911 2 742 359 267 0 0 chr15 20673614 20673700 -82821274 - Lx8 LINE L1 -952 6521 6436 2 742 429 20 0 0 chr15 20673925 20673975 -82820999 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 2 742 1653 118 0 16 chr15 20673977 20674235 -82820739 - Lx3A LINE L1 0 6981 6728 2 742 643 294 45 26 chr15 20674715 20675007 -82819967 + MTE2a LTR MaLR 131 419 0 2 742 3144 33 51 0 chr15 20675671 20676062 -82818912 - IAPLTR2a LTR ERVK 0 411 1 2 742 180 0 0 0 chr15 20676685 20676705 -82818269 + (A)n Simple_repeat Simple_repeat 1 20 0 2 742 500 193 9 0 chr15 20676796 20676905 -82818069 + GA-rich Low_complexity Low_complexity 2 111 0 2 742 297 0 0 0 chr15 20676906 20676939 -82818035 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 742 531 0 0 0 chr15 20678605 20678664 -82816310 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 742 21 36 0 0 chr15 20678675 20678703 -82816271 + AT_rich Low_complexity Low_complexity 1 28 0 2 742 353 299 17 8 chr15 20678794 20678912 -82816062 - RMER5 LTR ERV1 -10 524 406 2 742 414 0 0 0 chr15 20679041 20679087 -82815887 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 2 742 441 0 0 0 chr15 20679151 20679200 -82815774 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 742 234 62 0 0 chr15 20679205 20679237 -82815737 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 742 431 282 48 55 chr15 20679377 20679542 -82815432 - RMER5 LTR ERV1 -325 209 46 2 742 244 264 0 0 chr15 20679861 20679914 -82815060 - PB1D10 SINE Alu 0 117 65 2 742 215 320 158 39 chr15 20680574 20680701 -82814273 + ID_B1 SINE B4 82 223 -1 2 742 927 271 101 35 chr15 20680762 20681110 -82813864 + RMER13A LTR ERVK 96 466 -394 2 742 5438 131 37 7 chr15 20681942 20682810 -82812164 - Lx LINE L1 0 6654 5761 2 742 21 0 0 0 chr15 20684034 20684055 -82810919 + AT_rich Low_complexity Low_complexity 1 21 0 2 742 23 0 0 0 chr15 20685090 20685113 -82809861 + AT_rich Low_complexity Low_complexity 1 23 0 2 742 397 234 0 47 chr15 20685242 20685327 -82809647 + Lx5 LINE L1 6702 6782 -268 2 742 996 75 0 70 chr15 20685329 20685486 -82809488 + B1_Mm SINE Alu 2 147 0 2 742 3960 82 26 2 chr15 20685496 20686036 -82808938 + L1_Mus2 LINE L1 6014 6566 0 2 742 24 32 0 0 chr15 20686069 20686100 -82808874 + AT_rich Low_complexity Low_complexity 1 31 0 2 742 531 251 28 9 chr15 20686102 20686236 -82808738 + Lx5 LINE L1 6796 6908 -142 2 742 292 295 14 64 chr15 20686349 20686490 -82808484 + BC1_Mm scRNA scRNA 14 147 -5 2 742 7250 90 7 2 chr15 20686926 20687902 -82807072 - L1Md_F2 LINE L1 -15 6567 5587 2 742 242 308 55 55 chr15 20688274 20688384 -82806590 + B3 SINE B2 92 201 -15 2 742 548 60 68 19 chr15 20688417 20688520 -82806454 + (CATATA)n Simple_repeat Simple_repeat 4 111 0 2 742 297 51 0 0 chr15 20688520 20688559 -82806415 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 742 363 302 19 9 chr15 20688939 20689046 -82805928 - ID_B1 SINE B4 -21 203 96 2 742 266 238 54 59 chr15 20689063 20689215 -82805759 - L1_Mur3 LINE L1 -420 5880 5692 2 742 2908 93 10 0 chr15 20689802 20690219 -82804755 - BGLII LTR ERVK 0 421 1 2 742 3005 206 108 8 chr15 20690220 20691156 -82803818 - MYSERV16_I-int LTR ERVK -1 2325 1297 2 742 2577 185 91 66 chr15 20691145 20691832 -82803142 - RMER3D-int LTR ERVK -1145 1697 470 2 742 505 181 52 0 chr15 20691834 20691950 -82803024 - RMER3D-int LTR ERVK -2232 610 489 2 742 802 195 62 37 chr15 20691986 20692292 -82802682 - RMER3D-int LTR ERVK -1991 851 354 2 742 2354 100 107 13 chr15 20692665 20692853 -82802121 - BGLII LTR ERVK 0 421 206 2 742 681 13 0 0 chr15 20692853 20692931 -82802043 + (TC)n Simple_repeat Simple_repeat 1 78 0 2 742 2354 100 107 13 chr15 20692931 20693127 -82801847 - BGLII LTR ERVK -216 205 1 2 742 537 292 123 8 chr15 20693127 20693379 -82801595 - RMER5 LTR ERV1 -2 532 252 2 742 3013 107 50 60 chr15 20693843 20694360 -82800614 + RLTR1B LTR ERV1 1 512 0 2 742 21 0 0 0 chr15 20694565 20694586 -82800388 + AT_rich Low_complexity Low_complexity 1 21 0 2 742 285 330 68 0 chr15 20694978 20695081 -82799893 + ID_B1 SINE B4 115 224 0 2 742 628 83 24 24 chr15 20695081 20695205 -82799769 + (GAAA)n Simple_repeat Simple_repeat 1 124 0 2 742 558 0 0 0 chr15 20697590 20697652 -82797322 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 2 742 1034 95 0 0 chr15 20697653 20697790 -82797184 - B1_Mm SINE Alu -10 137 1 2 742 777 98 0 0 chr15 20698197 20698309 -82796665 + (TTCC)n Simple_repeat Simple_repeat 3 114 0 2 742 1088 95 7 0 chr15 20698309 20698456 -82796518 - B1_Mus1 SINE Alu 0 148 1 2 742 301 253 25 0 chr15 20698473 20698552 -82796422 + B3 SINE B2 128 208 -8 2 742 1000 278 152 18 chr15 20698676 20699113 -82795861 - RLTR16 LTR ERVK -9 496 1 2 742 960 280 89 22 chr15 20699531 20699713 -82795261 - ORR1C2 LTR MaLR 0 374 178 2 742 450 0 0 0 chr15 20699713 20699763 -82795211 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 742 960 280 89 22 chr15 20699763 20699894 -82795080 - ORR1C2 LTR MaLR -197 177 40 2 742 1284 286 81 26 chr15 20699900 20700482 -82794492 - ORR1C2-int LTR MaLR -345 1025 601 2 742 389 165 182 20 chr15 20700479 20700571 -82794403 - ORR1C2-int LTR MaLR -998 372 264 2 742 1055 139 0 6 chr15 20700571 20700752 -82794222 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2 742 420 20 0 0 chr15 20700770 20700819 -82794155 + (TTCTC)n Simple_repeat Simple_repeat 3 51 0 2 742 957 167 0 0 chr15 20700821 20700995 -82793979 + T-rich Low_complexity Low_complexity 5 178 0 2 742 470 233 41 8 chr15 20701028 20701149 -82793825 - ORR1C2-int LTR MaLR -1123 247 123 2 742 2186 249 89 12 chr15 20701165 20701735 -82793239 + Lx2B LINE L1 6373 6986 -14 2 742 484 224 19 0 chr15 20701739 20701846 -82793128 - ORR1C2-int LTR MaLR -1261 109 1 2 742 1258 236 99 10 chr15 20701873 20702186 -82792788 - ORR1C2 LTR MaLR -41 343 3 2 742 681 13 0 0 chr15 20702307 20702385 -82792589 + (TTC)n Simple_repeat Simple_repeat 2 79 0 2 742 3903 96 21 16 chr15 20702400 20702981 -82791993 - L1_Mus1 LINE L1 -1 6566 5983 3 742 411 21 0 0 chr15 20703352 20703400 -82791574 + (TC)n Simple_repeat Simple_repeat 2 49 0 3 742 21 0 0 0 chr15 20703619 20703640 -82791334 + AT_rich Low_complexity Low_complexity 1 21 0 3 742 351 44 0 0 chr15 20704088 20704133 -82790841 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 742 472 335 117 22 chr15 20704378 20704883 -82790091 - L1MC1 LINE L1 -119 6214 5662 3 742 353 306 40 7 chr15 20705090 20705238 -82789736 - L1MC1 LINE L1 -2583 5412 5260 3 742 21 0 0 0 chr15 20705306 20705327 -82789647 + AT_rich Low_complexity Low_complexity 1 21 0 3 742 468 105 0 0 chr15 20706377 20706453 -82788521 + (GA)n Simple_repeat Simple_repeat 2 77 0 3 742 306 50 0 0 chr15 20706636 20706676 -82788298 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 742 465 19 0 0 chr15 20706676 20706729 -82788245 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 742 374 184 0 48 chr15 20706729 20706900 -82788074 + (TG)n Simple_repeat Simple_repeat 1 162 0 3 742 189 0 0 0 chr15 20706900 20706921 -82788053 + (TC)n Simple_repeat Simple_repeat 2 22 0 3 742 374 184 0 48 chr15 20706921 20706937 -82788037 + (TG)n Simple_repeat Simple_repeat 1 16 0 3 742 282 56 0 0 chr15 20708604 20708640 -82786334 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 743 3793 180 90 46 chr15 20709588 20710529 -82784445 - RLTR13C1 LTR ERVK 0 983 1 3 743 604 159 37 0 chr15 20710698 20710805 -82784169 + RMER6C LTR ERVK 1 111 -579 3 743 428 212 12 0 chr15 20710791 20710871 -82784103 + MT2B LTR ERVL 183 263 -338 3 743 243 275 43 0 chr15 20710876 20710945 -82784029 + B1_Mm SINE Alu 22 93 -54 3 743 269 233 100 77 chr15 20710986 20711116 -82783858 + RMER6C LTR ERVK 342 474 -216 3 743 722 255 43 0 chr15 20712774 20712982 -82781992 + Lx9 LINE L1 7292 7508 -136 3 743 198 156 47 0 chr15 20713660 20713724 -82781250 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 743 900 251 62 33 chr15 20713773 20714049 -82780925 - BGLII_B LTR ERVK -10 431 148 3 743 283 279 0 12 chr15 20714049 20714129 -82780845 - BGLII_A LTR ERVK -348 97 19 3 743 570 279 77 26 chr15 20714131 20714463 -82780511 - L1_Mur1 LINE L1 -201 5676 5349 3 743 348 318 67 15 chr15 20714526 20714660 -82780314 + MIRb SINE MIR 95 235 -33 3 743 21 0 0 0 chr15 20714679 20714700 -82780274 + AT_rich Low_complexity Low_complexity 1 21 0 3 743 304 229 12 15 chr15 20714872 20714974 -82780000 + L1M2 LINE L1 5743 5838 -459 3 743 6588 176 35 7 chr15 20715126 20716694 -82778280 - Lx3C LINE L1 -4 6972 5359 3 743 8493 145 30 6 chr15 20716823 20718433 -82776541 - Lx2 LINE L1 0 6997 5347 3 743 2914 57 31 10 chr15 20718433 20718821 -82776153 - MTB LTR MaLR 0 396 1 3 743 7402 97 23 7 chr15 20718821 20719901 -82775073 - MTB-int LTR MaLR 0 1098 1 3 743 3204 60 5 0 chr15 20719901 20720299 -82774675 - MTB LTR MaLR 0 400 1 3 743 5581 161 6 26 chr15 20720299 20720764 -82774210 - Lx2 LINE L1 -537 5346 4902 3 743 779 315 25 4 chr15 20720843 20721082 -82773892 - MTD LTR MaLR -172 247 4 3 743 1190 272 34 21 chr15 20721719 20722046 -82772928 - RMER15 LTR ERVL 0 575 245 3 743 5297 116 15 14 chr15 20722359 20723173 -82771801 - Lx LINE L1 0 6654 5840 3 743 527 219 62 8 chr15 20723173 20723302 -82771672 + L1VL2 LINE L1 143 278 -6057 3 743 1602 106 124 0 chr15 20723309 20723591 -82771383 + MusHAL1 LINE L1 1313 1629 -1083 3 743 441 103 0 0 chr15 20723716 20723784 -82771190 + (A)n Simple_repeat Simple_repeat 1 68 0 3 743 1181 262 46 46 chr15 20724089 20724501 -82770473 - RMER5 LTR ERV1 0 534 123 3 743 825 79 70 8 chr15 20724508 20724636 -82770338 + L1_Mus1 LINE L1 6430 6565 -2 3 743 6133 159 23 11 chr15 20724718 20725805 -82769169 - Lx LINE L1 0 6654 5545 3 743 208 0 62 0 chr15 20726503 20726535 -82768439 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 743 401 235 0 0 chr15 20727560 20727641 -82767333 - Lx2B LINE L1 -533 6467 6387 3 743 3134 151 13 2 chr15 20727643 20728169 -82766805 + Lx2B LINE L1 6466 6997 -3 3 743 3979 166 86 1 chr15 20729458 20729471 -82765503 - Lx4A LINE L1 -8 7050 7037 3 743 261 57 0 0 chr15 20729471 20729506 -82765468 + (TTA)n Simple_repeat Simple_repeat 2 36 0 3 743 3979 166 86 1 chr15 20729506 20730202 -82764772 - Lx4A LINE L1 -22 7036 6282 3 743 538 305 89 32 chr15 20730433 20730680 -82764294 - RMER15 LTR ERVL -16 559 299 3 743 249 33 0 0 chr15 20731015 20731045 -82763929 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 743 207 162 0 0 chr15 20731045 20731082 -82763892 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 743 311 364 96 30 chr15 20732533 20732700 -82762274 + B4A SINE B4 115 292 0 3 743 210 37 0 0 chr15 20733598 20733625 -82761349 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 3 743 251 136 57 28 chr15 20734710 20734816 -82760158 + (TAGA)n Simple_repeat Simple_repeat 4 112 0 3 743 7913 153 24 26 chr15 20735056 20736415 -82758559 - Lx2 LINE L1 -2 6995 5640 3 743 23 86 0 0 chr15 20736653 20736711 -82758263 + AT_rich Low_complexity Low_complexity 1 58 0 3 743 494 70 14 0 chr15 20737068 20737139 -82757835 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 743 270 0 0 0 chr15 20737584 20737614 -82757360 + (T)n Simple_repeat Simple_repeat 1 30 0 3 743 378 74 0 0 chr15 20739262 20739316 -82755658 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 743 525 32 0 0 chr15 20739709 20739772 -82755202 + (TC)n Simple_repeat Simple_repeat 2 64 0 3 743 237 347 62 68 chr15 20740278 20740439 -82754535 - RMER13A LTR ERVK -687 173 14 3 743 1956 119 0 0 chr15 20740848 20741125 -82753849 - Lx3C LINE L1 -212 6764 6488 3 743 3260 43 5 0 chr15 20741125 20741519 -82753455 - MTA_Mm LTR MaLR 0 396 1 3 743 689 197 125 0 chr15 20741537 20741601 -82753373 + Lx3B LINE L1 6799 6876 -97 3 743 504 48 0 0 chr15 20741601 20741664 -82753310 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 743 689 197 125 0 chr15 20741664 20741751 -82753223 + Lx3B LINE L1 6877 6968 -5 3 743 29 60 0 0 chr15 20741912 20741962 -82753012 + AT_rich Low_complexity Low_complexity 1 50 0 3 743 670 342 62 16 chr15 20742982 20743303 -82751671 + MLT2B4 LTR ERVL 2 337 -219 3 743 531 352 50 25 chr15 20743657 20744017 -82750957 + ERVL-B4-int LTR ERVL 1264 1674 -4083 3 743 623 274 70 42 chr15 20744181 20744493 -82750481 + ERVL-B4-int LTR ERVL 2404 2724 -2990 3 743 2940 250 33 23 chr15 20744614 20745433 -82749541 + Lx7 LINE L1 6069 6895 -801 3 743 593 247 120 0 chr15 20745520 20745670 -82749304 - Lx7 LINE L1 -872 6824 6657 3 743 1302 227 40 6 chr15 20745673 20745996 -82748978 + Lx7 LINE L1 6861 7194 -502 3 743 2637 142 21 7 chr15 20746008 20746433 -82748541 - Lx2 LINE L1 -54 6943 6513 3 743 504 244 14 145 chr15 20746433 20746792 -82748182 + Lx7 LINE L1 7265 7576 -120 3 743 810 260 27 14 chr15 20746996 20747218 -82747756 + Lx6 LINE L1 7217 7441 -19 3 743 297 335 68 107 chr15 20749573 20749854 -82745120 - MTD LTR MaLR -132 287 18 3 743 294 353 134 59 chr15 20750327 20750634 -82744340 - MTE2a LTR MaLR -41 338 9 3 743 250 389 119 0 chr15 20750914 20751040 -82743934 - ID_B1 SINE B4 -83 141 1 3 743 260 308 37 37 chr15 20751048 20751156 -82743818 + MER58A DNA MER1_type 47 154 -70 3 743 37964 44 0 3 chr15 20751202 20757554 -82737420 - L1Md_T LINE L1 0 6585 155 3 743 207 100 0 0 chr15 20758496 20758526 -82736448 + (CATA)n Simple_repeat Simple_repeat 3 32 0 3 743 4228 80 3 27 chr15 20758707 20759299 -82735675 - LTRIS_Mus LTR ERV1 -9 578 1 3 743 462 350 53 53 chr15 20759675 20760049 -82734925 - Lx8 LINE L1 -316 7157 6784 3 743 378 0 0 0 chr15 20760111 20760153 -82734821 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 743 5328 112 158 25 chr15 20760283 20760855 -82734119 - RLTR13D4 LTR ERVK 0 1033 344 3 743 234 0 0 0 chr15 20760855 20760881 -82734093 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 743 1041 80 0 0 chr15 20760881 20761019 -82733955 - B1_Mus1 SINE Alu -10 138 1 3 743 5328 112 158 25 chr15 20761019 20761357 -82733617 - RLTR13D4 LTR ERVK -690 343 2 3 743 1076 308 47 39 chr15 20761357 20761402 -82733572 - ORR1D2 LTR MaLR -6 364 326 3 743 2342 115 0 68 chr15 20761402 20761802 -82733172 - Lx LINE L1 -7 6647 6275 3 743 1076 308 47 39 chr15 20761802 20762117 -82732857 - ORR1D2 LTR MaLR -45 325 1 3 743 337 326 24 90 chr15 20762161 20762373 -82732601 + L1MC3 LINE L1 6879 7076 -709 3 743 348 309 97 47 chr15 20762457 20762756 -82732218 + L1MC3 LINE L1 7170 7483 -302 3 743 21 57 0 0 chr15 20763225 20763260 -82731714 + AT_rich Low_complexity Low_complexity 1 35 0 3 743 330 45 0 0 chr15 20763353 20763397 -82731577 + (TATG)n Simple_repeat Simple_repeat 2 45 0 3 743 30 97 0 0 chr15 20764450 20764543 -82730431 + AT_rich Low_complexity Low_complexity 1 93 0 3 743 243 0 0 0 chr15 20765237 20765264 -82729710 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 3 743 180 222 67 0 chr15 20765656 20765701 -82729273 - MIRc SINE MIR -109 159 112 3 743 225 0 0 0 chr15 20766631 20766656 -82728318 + (TTTTTG)n Simple_repeat Simple_repeat 5 29 0 3 743 204 40 0 0 chr15 20767899 20767924 -82727050 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 743 22 35 0 0 chr15 20768484 20768513 -82726461 + AT_rich Low_complexity Low_complexity 1 29 0 3 743 480 76 10 52 chr15 20768779 20768876 -82726098 + (TTTTC)n Simple_repeat Simple_repeat 1 93 0 3 743 1003 175 25 20 chr15 20768876 20769080 -82725894 - Lx3B LINE L1 -1 6972 6768 3 743 381 227 71 0 chr15 20769355 20769496 -82725478 + Lx9 LINE L1 7492 7642 -2 3 743 1075 276 57 23 chr15 20769712 20770064 -82724910 - MTD LTR MaLR -9 410 47 3 743 577 143 0 40 chr15 20770064 20770188 -82724786 + CT-rich Low_complexity Low_complexity 2 120 0 3 743 207 0 0 0 chr15 20770415 20770438 -82724536 + (T)n Simple_repeat Simple_repeat 1 23 0 3 743 303 311 41 82 chr15 20770849 20771045 -82723929 - MIR SINE MIR -30 232 45 3 743 786 22 0 0 chr15 20771570 20771662 -82723312 + (TC)n Simple_repeat Simple_repeat 1 92 0 3 743 450 0 0 0 chr15 20771662 20771711 -82723263 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 743 1450 265 50 21 chr15 20771720 20772156 -82722818 + Lx6 LINE L1 7010 7458 -2 3 743 558 319 0 11 chr15 20772445 20772629 -82722345 - B3A SINE B2 -16 182 1 3 743 667 231 130 1 chr15 20774436 20774630 -82720344 - ORR1C2 LTR MaLR -11 367 144 3 743 3007 209 60 8 chr15 20774631 20775287 -82719687 - Lx2B LINE L1 -27 6973 6284 3 743 1822 171 3 34 chr15 20775281 20775637 -82719337 + Lx2B LINE L1 5806 6150 -850 3 743 317 352 39 0 chr15 20776215 20776343 -82718631 + MLT1B LTR MaLR 258 390 0 4 743 1150 54 0 39 chr15 20776626 20776780 -82718194 - B1_Mus1 SINE Alu 0 148 1 4 743 338 390 67 98 chr15 20777406 20777694 -82717280 - MER74A LTR ERVL -86 472 176 4 743 1415 50 44 0 chr15 20777694 20777876 -82717098 - B2_Mm2 SINE B2 -5 190 1 4 743 323 393 63 105 chr15 20777876 20777965 -82717009 - MER74A LTR ERVL -383 175 95 4 743 513 91 0 0 chr15 20777965 20778042 -82716932 + L1_Mus2 LINE L1 6490 6566 0 4 743 323 393 63 105 chr15 20778042 20778140 -82716834 - MER74A LTR ERVL -464 94 16 4 743 964 243 90 25 chr15 20779148 20779427 -82715547 - ORR1C2 LTR MaLR -2 382 86 4 743 3247 94 50 0 chr15 20779527 20780006 -82714968 + Lx2 LINE L1 6490 6992 -5 4 743 1018 191 77 0 chr15 20780076 20780285 -82714689 - URR1B DNA MER1_type 0 225 1 4 743 318 106 0 0 chr15 20780468 20780515 -82714459 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 743 330 67 0 0 chr15 20781783 20781828 -82713146 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 743 194 0 0 37 chr15 20782603 20782630 -82712344 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 4 743 3997 127 26 18 chr15 20782685 20783344 -82711630 + Lx LINE L1 5986 6649 -5 4 743 29 70 0 0 chr15 20783362 20783419 -82711555 + AT_rich Low_complexity Low_complexity 1 57 0 4 743 846 267 36 44 chr15 20783425 20783676 -82711298 - Lx6 LINE L1 -30 7430 7182 4 743 513 269 89 47 chr15 20783722 20784004 -82710970 + Lx5 LINE L1 6255 6784 -676 4 743 26 0 0 0 chr15 20784096 20784122 -82710852 + AT_rich Low_complexity Low_complexity 1 26 0 4 743 495 309 96 11 chr15 20784410 20784587 -82710387 - B3 SINE B2 -5 211 20 4 743 2550 132 7 19 chr15 20784931 20784969 -82710005 + L1_Mus3 LINE L1 5854 5885 -753 4 743 2311 128 0 23 chr15 20784969 20785353 -82709621 - L1_Mus4 LINE L1 0 6636 6262 4 743 2550 132 7 19 chr15 20785353 20785732 -82709242 + L1_Mus4 LINE L1 5886 6265 -373 4 743 22 35 0 0 chr15 20786104 20786133 -82708841 + AT_rich Low_complexity Low_complexity 1 29 0 4 743 214 288 0 0 chr15 20786144 20786203 -82708771 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 743 198 0 0 0 chr15 20786871 20786893 -82708081 + (TA)n Simple_repeat Simple_repeat 2 23 0 4 743 541 0 29 0 chr15 20787247 20787316 -82707658 + (TA)n Simple_repeat Simple_repeat 1 71 0 4 743 211 310 178 27 chr15 20787667 20787813 -82707161 - L2 LINE L2 -1258 2161 1994 4 743 28 48 0 0 chr15 20788126 20788168 -82706806 + AT_rich Low_complexity Low_complexity 1 42 0 4 743 272 292 28 0 chr15 20788424 20788496 -82706478 + RMER5 LTR ERV1 40 113 -421 4 743 852 117 23 17 chr15 20788499 20788673 -82706301 + CT-rich Low_complexity Low_complexity 3 177 0 4 743 426 20 0 0 chr15 20788670 20788721 -82706253 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 743 866 149 14 0 chr15 20788724 20788865 -82706109 - B1_Mus1 SINE Alu -3 145 3 4 743 539 345 77 18 chr15 20788866 20789202 -82705772 + RMER5 LTR ERV1 113 468 -66 4 743 8550 104 9 21 chr15 20789443 20791078 -82703896 - Lx3_Mus LINE L1 -766 6243 4631 4 743 324 0 0 0 chr15 20791078 20791114 -82703860 + (T)n Simple_repeat Simple_repeat 1 36 0 4 743 5369 91 19 1 chr15 20791116 20791867 -82703107 + Lx3_Mus LINE L1 6246 7009 0 4 743 848 272 118 112 chr15 20792297 20792789 -82702185 - RLTR12B LTR ERVK -17 511 17 4 743 237 265 49 0 chr15 20793629 20793731 -82701243 - Lx9 LINE L1 -20 7624 7518 4 743 330 314 84 83 chr15 20793830 20794135 -82700839 + MLT1C LTR MaLR 63 434 -33 4 743 870 215 80 76 chr15 20794152 20794521 -82700453 - RMER10A LTR ERVL -6 436 1 4 743 813 249 44 0 chr15 20794763 20794968 -82700006 + B3 SINE B2 3 216 0 4 743 24 0 0 0 chr15 20794968 20794992 -82699982 + AT_rich Low_complexity Low_complexity 1 24 0 4 743 200 357 0 0 chr15 20795213 20795269 -82699705 + G-rich Low_complexity Low_complexity 6 61 0 4 743 317 154 21 21 chr15 20795279 20795372 -82699602 + GA-rich Low_complexity Low_complexity 1 93 0 4 743 1098 241 27 7 chr15 20795375 20795672 -82699302 + RMER1A Other Other 727 1029 -1 4 743 444 270 90 0 chr15 20795696 20795874 -82699100 + Lx9 LINE L1 7281 7474 -170 4 743 297 68 0 0 chr15 20795931 20795975 -82698999 + (TAGA)n Simple_repeat Simple_repeat 4 47 0 4 743 3576 102 21 6 chr15 20796129 20796659 -82698315 - L1_Mus3 LINE L1 -6 6632 6095 4 743 2397 97 2 3 chr15 20796659 20797006 -82697968 + L1_Mus3 LINE L1 5830 6523 -535 4 743 197 0 0 67 chr15 20797231 20797261 -82697713 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 743 237 352 80 0 chr15 20797316 20797404 -82697570 + B1F SINE Alu 39 133 -16 4 743 21 36 0 0 chr15 20797414 20797442 -82697532 + AT_rich Low_complexity Low_complexity 1 28 0 4 743 445 326 13 13 chr15 20798134 20798283 -82696691 + B1_Mur2 SINE Alu 1 149 0 4 743 28 0 0 0 chr15 20798817 20798845 -82696129 + AT_rich Low_complexity Low_complexity 1 28 0 4 743 21 0 0 0 chr15 20799114 20799135 -82695839 + AT_rich Low_complexity Low_complexity 1 21 0 4 743 22 35 0 0 chr15 20799582 20799611 -82695363 + AT_rich Low_complexity Low_complexity 1 29 0 4 743 213 39 0 0 chr15 20799830 20799856 -82695118 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 4 743 1009 97 7 0 chr15 20799856 20800000 -82694974 - B1_Mus1 SINE Alu -2 146 2 4 743 276 346 89 0 chr15 20800092 20800193 -82694781 - RSINE1 SINE B4 -41 124 15 4 743 1214 257 28 39 chr15 20800399 20800755 -82694219 - Lx6 LINE L1 -1 7459 7108 4 743 1299 287 24 24 chr15 20801033 20801486 -82693488 - Lx9 LINE L1 -144 7500 7048 4 743 657 353 25 43 chr15 20801766 20802251 -82692723 - Lx8 LINE L1 -235 7238 6763 4 743 276 350 66 34 chr15 20803102 20803402 -82691572 + MLT1C LTR MaLR 23 352 -115 4 743 255 354 14 0 chr15 20804972 20805058 -82689916 - ID4 SINE ID -56 96 10 4 743 21 0 0 0 chr15 20805484 20805505 -82689469 + AT_rich Low_complexity Low_complexity 1 21 0 4 743 33 73 0 0 chr15 20806369 20806437 -82688537 + AT_rich Low_complexity Low_complexity 1 68 0 4 743 227 353 35 70 chr15 20807326 20807469 -82687505 + MLT1I LTR MaLR 271 408 -3 4 743 1087 88 0 0 chr15 20808125 20808272 -82686702 + B1_Mm SINE Alu 1 147 0 4 743 238 26 51 0 chr15 20808608 20808647 -82686327 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 4 743 286 61 20 20 chr15 20809009 20809059 -82685915 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 4 743 2469 96 298 4 chr15 20809059 20809529 -82685445 - Lx3A LINE L1 -13 6968 6361 4 743 23 0 0 0 chr15 20809535 20809558 -82685416 + AT_rich Low_complexity Low_complexity 1 23 0 4 743 486 0 0 0 chr15 20810417 20810471 -82684503 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 743 564 259 92 88 chr15 20810472 20810883 -82684091 + Lx7 LINE L1 7277 7689 -7 4 743 22 56 0 0 chr15 20811748 20811784 -82683190 + AT_rich Low_complexity Low_complexity 1 36 0 4 743 189 0 0 0 chr15 20812870 20812891 -82682083 + (GA)n Simple_repeat Simple_repeat 2 22 0 4 743 204 333 9 17 chr15 20813350 20813466 -82681508 + (CATA)n Simple_repeat Simple_repeat 4 118 0 4 743 203 186 91 23 chr15 20813724 20813812 -82681162 + (TTTAA)n Simple_repeat Simple_repeat 1 94 0 4 743 1418 211 88 22 chr15 20814059 20814422 -82680552 - RMER12 LTR ERVK -5 1317 931 4 743 360 59 0 0 chr15 20815350 20815401 -82679573 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 4 743 1008 81 0 0 chr15 20815402 20815538 -82679436 - B1_Mus1 SINE Alu -12 136 1 4 743 22 56 0 0 chr15 20815803 20815839 -82679135 + AT_rich Low_complexity Low_complexity 1 36 0 4 743 1241 72 55 0 chr15 20816662 20816843 -82678131 + B2_Mm2 SINE B2 3 193 -2 4 743 495 0 0 0 chr15 20817185 20817240 -82677734 + (TA)n Simple_repeat Simple_repeat 2 56 0 4 743 21 0 0 0 chr15 20817436 20817457 -82677517 + AT_rich Low_complexity Low_complexity 1 21 0 4 743 2988 240 33 102 chr15 20817848 20818789 -82676185 + RMER1B Other Other 9 884 -182 4 743 488 136 0 11 chr15 20818795 20818884 -82676090 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 4 743 1612 179 78 15 chr15 20819359 20819733 -82675241 - Lx5 LINE L1 -1094 5956 5587 4 743 488 335 13 71 chr15 20819738 20819976 -82674998 - Lx8 LINE L1 -120 7353 7130 4 743 198 156 0 0 chr15 20820992 20821037 -82673937 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 743 222 37 0 0 chr15 20821258 20821285 -82673689 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 743 233 370 58 58 chr15 20821437 20821592 -82673382 + MLT1D LTR MaLR 53 207 -298 4 743 195 69 0 0 chr15 20821783 20821812 -82673162 + (T)n Simple_repeat Simple_repeat 1 29 0 4 743 260 227 13 0 chr15 20822135 20822210 -82672764 + (TA)n Simple_repeat Simple_repeat 1 76 0 4 743 260 200 0 43 chr15 20822622 20822669 -82672305 + Lx6 LINE L1 7296 7340 -120 4 743 998 76 0 0 chr15 20822674 20822806 -82672168 + B1_Mm SINE Alu 6 137 -10 4 743 402 15 29 44 chr15 20822806 20822874 -82672100 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 4 743 681 177 7 0 chr15 20822928 20823075 -82671899 + Lx2 LINE L1 6839 6986 -11 4 743 1822 289 18 12 chr15 20823075 20823572 -82671402 - Lx6 LINE L1 -204 7256 6757 4 743 357 306 9 0 chr15 20823653 20823761 -82671213 - Lx6 LINE L1 -733 6727 6619 4 743 243 0 0 0 chr15 20823770 20823797 -82671177 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 743 1835 232 154 43 chr15 20823801 20823898 -82671076 - L1_Mur3 LINE L1 -641 5239 5117 4 743 351 0 0 0 chr15 20823898 20823937 -82671037 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 4 743 1835 232 154 43 chr15 20823937 20824370 -82670604 - L1_Mur3 LINE L1 -764 5116 4631 4 743 342 0 0 0 chr15 20824370 20824408 -82670566 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 743 1835 232 154 43 chr15 20824408 20824570 -82670404 - L1_Mur3 LINE L1 -1250 4630 4471 4 743 22 0 0 0 chr15 20824670 20824692 -82670282 + AT_rich Low_complexity Low_complexity 1 22 0 4 743 293 222 92 69 chr15 20824851 20825025 -82669949 - RLTR40 LTR ERVK -74 743 566 4 743 189 0 0 0 chr15 20825025 20825046 -82669928 + (TC)n Simple_repeat Simple_repeat 1 21 0 5 743 476 357 36 39 chr15 20825046 20825326 -82669648 - B4A SINE B4 0 292 14 5 743 1377 143 25 4 chr15 20825548 20825793 -82669181 - Lx2 LINE L1 -3 6994 6745 5 743 1294 128 10 0 chr15 20826494 20826698 -82668276 - Lx3C LINE L1 -970 6006 5801 5 743 4783 157 58 28 chr15 20826698 20827624 -82667350 + Lx3C LINE L1 6021 6974 -2 5 743 3429 48 25 7 chr15 20827621 20828063 -82666911 + L1Md_F2 LINE L1 6123 6572 -10 5 743 183 100 0 0 chr15 20828063 20828093 -82666881 + (TAA)n Simple_repeat Simple_repeat 2 31 0 5 743 843 77 8 8 chr15 20828923 20829054 -82665920 + L1_Mus2 LINE L1 6436 6566 0 5 743 25 31 0 0 chr15 20829098 20829130 -82665844 + AT_rich Low_complexity Low_complexity 1 32 0 5 743 10948 50 9 2 chr15 20829138 20831205 -82663769 - L1Md_F3 LINE L1 0 6584 4504 5 743 30 45 0 0 chr15 20831420 20831464 -82663510 + AT_rich Low_complexity Low_complexity 1 44 0 5 743 225 260 0 0 chr15 20831619 20831669 -82663305 - Lx7 LINE L1 -20 7676 7627 5 743 192 40 0 0 chr15 20831761 20831786 -82663188 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 5 743 914 303 29 42 chr15 20831808 20832190 -82662784 + Lx7 LINE L1 6841 7217 -479 5 743 203 61 30 0 chr15 20833593 20833626 -82661348 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 743 213 218 28 14 chr15 20834279 20834295 -82660679 + polypyrimidine Low_complexity Low_complexity 131 146 0 5 743 498 108 0 0 chr15 20834295 20834378 -82660596 + (TG)n Simple_repeat Simple_repeat 2 84 0 5 743 213 218 28 14 chr15 20834378 20834453 -82660521 + CT-rich Low_complexity Low_complexity 55 130 0 5 743 990 87 29 6 chr15 20834453 20834627 -82660347 + (TTCTC)n Simple_repeat Simple_repeat 3 180 0 5 743 213 218 28 14 chr15 20834627 20834678 -82660296 + CT-rich Low_complexity Low_complexity 2 54 0 5 743 21 36 0 0 chr15 20834812 20834840 -82660134 + AT_rich Low_complexity Low_complexity 1 28 0 5 743 180 111 0 0 chr15 20835236 20835263 -82659711 + (CATA)n Simple_repeat Simple_repeat 2 28 0 5 743 326 39 0 0 chr15 20835531 20835583 -82659391 - L1_Mus4 LINE L1 -6 6630 6579 5 743 1153 75 0 0 chr15 20836286 20836433 -82658541 - B1_Mus2 SINE Alu 0 147 1 5 743 22 0 0 0 chr15 20836550 20836572 -82658402 + AT_rich Low_complexity Low_complexity 1 22 0 5 743 21 36 0 0 chr15 20836824 20836852 -82658122 + AT_rich Low_complexity Low_complexity 1 28 0 5 743 621 223 7 33 chr15 20838916 20839069 -82655905 + RMER1B Other Other 63 211 -855 5 743 369 279 0 0 chr15 20839056 20839160 -82655814 + RMER1B Other Other 961 1064 -2 5 743 2778 166 52 20 chr15 20839258 20839482 -82655492 - RLTR12A LTR ERVK -13 555 324 5 743 753 12 0 0 chr15 20839482 20839568 -82655406 + (TC)n Simple_repeat Simple_repeat 1 86 0 5 743 2778 166 52 20 chr15 20839568 20839879 -82655095 - RLTR12A LTR ERVK -245 323 4 5 92 2904 46 52 0 chr15 20840144 20840513 -82654461 + RLTR10 LTR ERVK 1 388 -2 5 744 227 226 0 36 chr15 20841765 20841783 -82653191 + (CA)n Simple_repeat Simple_repeat 2 18 0 5 744 207 0 0 0 chr15 20841783 20841806 -82653168 + (GA)n Simple_repeat Simple_repeat 2 24 0 5 744 227 226 0 36 chr15 20841806 20841842 -82653132 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 744 23 0 0 0 chr15 20842017 20842040 -82652934 + AT_rich Low_complexity Low_complexity 1 23 0 5 744 554 226 79 20 chr15 20842072 20842275 -82652699 + Lx7 LINE L1 7474 7688 -8 5 744 4297 110 20 9 chr15 20842475 20843115 -82651859 - Lx3_Mus LINE L1 -5 7004 6358 5 744 4358 36 0 2 chr15 20843114 20843638 -82651336 + L1Md_T LINE L1 6060 6582 0 5 744 308 170 38 0 chr15 20843638 20843691 -82651283 - Lx3_Mus LINE L1 -642 6367 6313 5 744 1109 91 58 21 chr15 20843667 20843858 -82651116 - Lx3A LINE L1 -1001 5980 5783 5 744 39407 27 2 6 chr15 20843859 20850088 -82644886 - L1Md_T LINE L1 0 6582 383 5 744 253 111 0 0 chr15 20850088 20850124 -82644850 - Lx3_Mus LINE L1 -1294 5715 5680 5 744 987 267 122 0 chr15 20850394 20850746 -82644228 + Lx8 LINE L1 6197 6591 -882 5 744 3826 175 0 87 chr15 20850746 20851212 -82643762 - Lx3_Mus LINE L1 -230 5647 5254 5 744 1371 75 0 0 chr15 20851212 20851399 -82643575 - L1_Mus2 LINE L1 -2 6564 6378 5 744 3826 175 0 87 chr15 20851399 20851802 -82643172 - Lx3_Mus LINE L1 -624 5253 4854 5 744 343 344 11 0 chr15 20852288 20852381 -82642593 - PB1D7 SINE Alu -12 108 15 5 744 444 286 127 73 chr15 20852780 20853025 -82641949 - MLT1J-int LTR MaLR -284 1103 846 5 744 1098 172 11 33 chr15 20853233 20853456 -82641518 - ORR1C2 LTR MaLR -202 182 1 5 744 183 42 0 0 chr15 20853888 20853912 -82641062 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 5 744 953 153 10 21 chr15 20853912 20854096 -82640878 - Lx3A LINE L1 -14 6967 6786 5 744 5553 120 8 3 chr15 20854214 20855064 -82639910 - Lx3A LINE L1 -207 6774 5921 5 744 567 0 0 0 chr15 20855068 20855131 -82639843 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 5 744 1799 175 44 13 chr15 20855141 20855459 -82639515 + RLTR26 LTR ERVK 1 328 -314 5 744 360 60 0 20 chr15 20855455 20855506 -82639468 - RLTR26 LTR ERVK -353 289 240 5 744 5680 106 25 5 chr15 20855519 20856389 -82638585 - L1_Mus3 LINE L1 0 6638 5751 5 744 2433 134 3 3 chr15 20856389 20856756 -82638218 + L1_Mm LINE L1 5483 5849 -34 5 744 429 125 0 0 chr15 20856756 20856820 -82638154 - Lx3_Mus LINE L1 -1217 5792 5729 5 744 190 197 242 0 chr15 20857584 20857650 -82637324 + L4 LINE RTE 92 173 -1856 5 744 24 0 0 0 chr15 20858294 20858318 -82636656 + AT_rich Low_complexity Low_complexity 1 24 0 5 744 222 37 0 0 chr15 20858805 20858832 -82636142 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 744 231 140 0 0 chr15 20859269 20859319 -82635655 + (A)n Simple_repeat Simple_repeat 1 50 0 5 744 246 59 0 0 chr15 20859921 20859927 -82635047 + (CTG)n Simple_repeat Simple_repeat 3 8 0 5 744 801 0 0 0 chr15 20859927 20860016 -82634958 + (TTC)n Simple_repeat Simple_repeat 3 91 0 5 744 246 59 0 0 chr15 20860016 20860043 -82634931 + (CTG)n Simple_repeat Simple_repeat 3 29 0 5 744 247 196 0 0 chr15 20860126 20860172 -82634802 + Lx7 LINE L1 7627 7672 -24 5 744 808 357 110 76 chr15 20860320 20861336 -82633638 - MLT1-int LTR MaLR -66 1305 255 5 744 1459 59 0 41 chr15 20861864 20862058 -82632916 - B2_Mm1t SINE B2 -6 187 2 5 744 23 54 0 0 chr15 20863066 20863103 -82631871 + AT_rich Low_complexity Low_complexity 1 37 0 5 744 5781 81 1 4 chr15 20863214 20863995 -82630979 - L1Md_F2 LINE L1 -7 6575 5797 5 744 3030 72 0 0 chr15 20863995 20864382 -82630592 + L1Md_F2 LINE L1 5278 5664 -219 5 744 269 229 16 0 chr15 20864370 20864431 -82630543 - Lx3C LINE L1 -667 6309 6248 5 744 352 250 83 9 chr15 20864561 20864670 -82630304 + MTD LTR MaLR 280 396 -23 5 744 21 71 0 0 chr15 20865849 20865891 -82629083 + AT_rich Low_complexity Low_complexity 1 42 0 5 744 924 351 15 44 chr15 20866184 20866708 -82628266 - Lx9 LINE L1 -398 7246 6738 5 744 1008 271 55 27 chr15 20866712 20867173 -82627801 + L1_Rod LINE L1 4451 4914 -966 5 744 265 43 21 42 chr15 20867525 20867573 -82627401 + (CTA)n Simple_repeat Simple_repeat 1 47 0 5 744 188 182 0 22 chr15 20867602 20867647 -82627327 + (TTA)n Simple_repeat Simple_repeat 2 45 0 5 744 22 35 0 0 chr15 20868698 20868727 -82626247 + AT_rich Low_complexity Low_complexity 1 29 0 5 744 423 56 0 0 chr15 20869333 20869387 -82625587 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 744 494 210 62 42 chr15 20869464 20869608 -82625366 - B1F2 SINE Alu 0 149 3 5 744 21 0 0 0 chr15 20869706 20869727 -82625247 + AT_rich Low_complexity Low_complexity 1 21 0 5 744 186 43 0 0 chr15 20869817 20869840 -82625134 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 744 252 184 0 0 chr15 20870975 20871024 -82623950 + (CAT)n Simple_repeat Simple_repeat 2 50 0 5 744 263 0 81 0 chr15 20871288 20871325 -82623649 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 5 744 315 246 82 76 chr15 20871763 20871921 -82623053 - Lx6 LINE L1 -1 7459 7301 5 744 249 281 0 0 chr15 20871923 20871987 -82622987 + Lx6 LINE L1 7211 7274 -186 5 744 23 86 0 0 chr15 20874638 20874696 -82620278 + AT_rich Low_complexity Low_complexity 1 58 0 5 744 2373 148 24 34 chr15 20874702 20875115 -82619859 - Lx3B LINE L1 -4 6969 6561 5 744 327 324 83 52 chr15 20875448 20875640 -82619334 + B3A SINE B2 1 198 0 5 744 582 15 0 0 chr15 20875805 20875872 -82619102 + (GGAA)n Simple_repeat Simple_repeat 1 67 0 5 744 203 390 12 49 chr15 20876647 20876809 -82618165 + L2c LINE L2 3172 3327 -60 5 744 21 0 0 0 chr15 20877330 20877351 -82617623 + AT_rich Low_complexity Low_complexity 1 21 0 5 744 1113 88 0 0 chr15 20878857 20879004 -82615970 + B1_Mus1 SINE Alu 2 148 0 5 744 21 0 0 0 chr15 20879084 20879105 -82615869 + AT_rich Low_complexity Low_complexity 1 21 0 5 744 1225 335 8 11 chr15 20879280 20879648 -82615326 + Lx6 LINE L1 6921 7287 -173 5 744 236 281 9 19 chr15 20879888 20879993 -82614981 + T-rich Low_complexity Low_complexity 1 104 0 5 744 32 81 0 0 chr15 20880096 20880170 -82614804 + AT_rich Low_complexity Low_complexity 1 74 0 5 744 1126 191 36 48 chr15 20880685 20881015 -82613959 + RMER3D-int LTR ERVK 2517 2842 0 5 744 1452 158 19 19 chr15 20881038 20881309 -82613665 + RLTR17 LTR ERVK 98 368 -324 5 744 315 0 0 0 chr15 20881314 20881349 -82613625 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 744 26 0 0 0 chr15 20882736 20882762 -82612212 + AT_rich Low_complexity Low_complexity 1 26 0 5 744 1335 239 90 7 chr15 20882918 20883217 -82611757 + ORR1B2 LTR MaLR 1 324 -43 5 744 858 90 8 0 chr15 20883217 20883339 -82611635 + B1_Mus1 SINE Alu 26 148 0 5 744 604 172 26 0 chr15 20883344 20883460 -82611514 - BGLII_Mus LTR ERVK -91 331 213 5 744 751 280 32 0 chr15 20883451 20883637 -82611337 - MMAR1 DNA Mariner -221 1065 874 5 744 4721 154 14 4 chr15 20883649 20884444 -82610530 - Lx LINE L1 -7 6647 5845 5 744 691 115 0 26 chr15 20884444 20884584 -82610390 + Lx2 LINE L1 5565 5692 -1284 5 744 1166 72 14 5 chr15 20885243 20885421 -82609553 + Lx2 LINE L1 5692 5870 -427 5 744 1724 297 106 24 chr15 20885421 20886132 -82608842 - MMAR1 DNA Mariner -450 836 68 5 744 312 240 0 46 chr15 20886132 20886241 -82608733 + Lx9 LINE L1 7537 7640 -4 5 744 7016 69 1 10 chr15 20886576 20887514 -82607460 - L1Md_F2 LINE L1 -2 6580 5673 6 744 776 308 78 25 chr15 20888023 20888383 -82606591 - MTE2a LTR MaLR 0 379 1 6 744 1404 211 244 21 chr15 20888867 20888988 -82605986 - Lx9 LINE L1 -7 7637 7515 6 744 186 43 0 0 chr15 20888988 20889011 -82605963 + (TA)n Simple_repeat Simple_repeat 1 23 0 6 744 1112 58 0 0 chr15 20889013 20889152 -82605822 - B1_Mm SINE Alu -6 141 3 6 744 1404 211 244 21 chr15 20889152 20889540 -82605434 - Lx9 LINE L1 -130 7514 7013 6 744 1490 217 48 82 chr15 20889540 20889748 -82605226 + RMER10B LTR ERVL 1 193 -205 6 744 668 64 0 11 chr15 20889748 20889843 -82605131 + (TCCCC)n Simple_repeat Simple_repeat 2 95 0 6 744 1490 217 48 82 chr15 20889843 20890046 -82604928 + RMER10B LTR ERVL 194 398 0 6 744 635 241 23 17 chr15 20890049 20890222 -82604752 - Lx9 LINE L1 -636 7008 6835 6 744 246 128 0 0 chr15 20891004 20891043 -82603931 + (CAA)n Simple_repeat Simple_repeat 1 39 0 6 744 25 75 0 0 chr15 20891522 20891575 -82603399 + AT_rich Low_complexity Low_complexity 1 53 0 6 744 21 36 0 0 chr15 20891896 20891924 -82603050 + AT_rich Low_complexity Low_complexity 1 28 0 6 744 383 316 105 46 chr15 20892324 20892543 -82602431 - RLTR18 LTR ERVK -2 614 383 6 744 4149 87 5 0 chr15 20892547 20893113 -82601861 + L1_Mus1 LINE L1 5999 6567 0 6 744 830 155 126 20 chr15 20893153 20893358 -82601616 + Lx LINE L1 6457 6654 0 6 744 22 35 0 0 chr15 20893358 20893387 -82601587 + AT_rich Low_complexity Low_complexity 1 29 0 6 744 1092 202 77 32 chr15 20893904 20894441 -82600533 - RMER10B LTR ERVL -5 437 1 6 744 482 176 64 9 chr15 20894524 20894633 -82600341 - Lx9 LINE L1 -199 7445 7331 6 744 1092 52 0 7 chr15 20894658 20894794 -82600180 + B1_Mm SINE Alu 2 136 -11 6 744 240 86 0 0 chr15 20894794 20894829 -82600145 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 744 195 42 0 0 chr15 20895699 20895723 -82599251 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6 744 591 194 64 8 chr15 20895740 20895865 -82599109 - B1_Mus1 SINE Alu -16 132 1 6 744 525 138 73 30 chr15 20896433 20896590 -82598384 + GA-rich Low_complexity Low_complexity 6 170 0 6 744 985 11 16 78 chr15 20896590 20896781 -82598193 + (GGGAGA)n Simple_repeat Simple_repeat 1 179 0 6 744 1925 164 58 64 chr15 20897177 20897645 -82597329 + Lx2B LINE L1 6525 6989 -11 6 744 204 40 0 0 chr15 20897646 20897671 -82597303 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 6 744 22 56 0 0 chr15 20899938 20899974 -82595000 + AT_rich Low_complexity Low_complexity 1 36 0 6 744 323 377 23 46 chr15 20900066 20900283 -82594691 + L3 LINE CR1 3647 3858 -631 6 744 981 236 22 40 chr15 20900890 20901164 -82593810 - L1_Mur3 LINE L1 -257 5623 5355 6 744 429 54 0 0 chr15 20901311 20901367 -82593607 + (TC)n Simple_repeat Simple_repeat 2 57 0 6 744 291 85 0 0 chr15 20901696 20901743 -82593231 + (TATG)n Simple_repeat Simple_repeat 4 50 0 6 744 929 166 0 0 chr15 20901744 20901895 -82593079 - B2_Mm2 SINE B2 -43 152 2 6 744 268 302 79 28 chr15 20901925 20902102 -82592872 - RLTR15 LTR ERVK -102 257 72 6 744 525 158 25 0 chr15 20902105 20902225 -82592749 + CT-rich Low_complexity Low_complexity 2 124 0 6 744 2820 23 48 8 chr15 20902609 20902962 -82592012 - IAPLTR1_Mm LTR ERVK 0 367 1 6 744 28770 21 1 1 chr15 20902962 20906233 -82588741 - IAPEz-int LTR ERVK 0 6481 3210 6 744 7566 75 107 12 chr15 20906232 20907421 -82587553 - IAPEz-int LTR ERVK -5168 1313 67 6 744 1017 119 74 0 chr15 20907392 20907568 -82587406 - IAPEz-int LTR ERVK -6285 196 8 6 744 2792 26 48 8 chr15 20907568 20907921 -82587053 - IAPLTR1_Mm LTR ERVK 0 367 1 6 744 497 266 34 57 chr15 20908047 20908310 -82586664 - RLTR15 LTR ERVK -68 291 35 6 744 584 252 89 27 chr15 20908323 20908547 -82586427 - L1_Mur3 LINE L1 -605 5275 5038 6 744 297 246 92 29 chr15 20908574 20908713 -82586261 - L1_Mur3 LINE L1 -1269 4874 4697 6 744 2272 251 120 43 chr15 20908691 20909693 -82585281 + RMER1B Other Other 64 1066 0 6 744 740 331 141 77 chr15 20909700 20910689 -82584285 + Lx8 LINE L1 6263 7314 -159 6 744 188 67 33 0 chr15 20911042 20911072 -82583902 + (TTGG)n Simple_repeat Simple_repeat 2 32 0 6 744 684 299 15 5 chr15 20911351 20911556 -82583418 + MTE2a LTR MaLR 172 378 -1 6 744 360 0 0 0 chr15 20911667 20911707 -82583267 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 744 636 278 159 11 chr15 20911792 20912068 -82582906 + Lx8 LINE L1 7036 7352 -121 6 744 622 287 67 0 chr15 20912243 20912393 -82582581 + B3 SINE B2 4 163 -53 6 744 339 25 0 0 chr15 20912434 20912474 -82582500 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 744 285 172 0 0 chr15 20912551 20912615 -82582359 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 744 329 336 60 117 chr15 20913362 20913696 -82581278 - MLT1E1A LTR MaLR -141 539 225 6 744 468 0 0 0 chr15 20914540 20914592 -82580382 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 744 244 337 81 11 chr15 20914595 20914682 -82580292 - PB1D10 SINE Alu -15 102 10 6 744 28 48 0 0 chr15 20917124 20917166 -82577808 + AT_rich Low_complexity Low_complexity 1 42 0 6 744 1922 205 32 3 chr15 20917920 20918296 -82576678 - Lx4A LINE L1 0 7058 6672 6 744 2914 38 3 39 chr15 20919281 20919665 -82575309 + L1Md_F2 LINE L1 6213 6582 0 6 744 2726 137 18 31 chr15 20919670 20920122 -82574852 - Lx4A LINE L1 -134 6924 6479 6 744 416 51 0 17 chr15 20920348 20920408 -82574566 + (TTTTA)n Simple_repeat Simple_repeat 2 60 0 6 744 2372 251 50 26 chr15 20920459 20920654 -82574320 - RMER1B Other Other -1 1065 868 6 744 474 208 346 0 chr15 20920654 20920813 -82574161 - B3 SINE B2 0 216 3 6 744 2372 257 57 25 chr15 20920813 20921403 -82573571 - RMER1B Other Other -199 867 179 6 744 683 12 12 0 chr15 20921756 20921840 -82573134 + (TC)n Simple_repeat Simple_repeat 2 86 0 6 744 333 82 0 0 chr15 20921966 20922015 -82572959 + (CATA)n Simple_repeat Simple_repeat 2 50 0 6 744 1291 50 33 16 chr15 20923257 20923439 -82571535 + L1Md_F3 LINE L1 6399 6583 -1 6 744 568 324 0 100 chr15 20923671 20923901 -82571073 - B3 SINE B2 0 216 10 6 744 227 173 19 0 chr15 20923907 20923959 -82571015 + (TTA)n Simple_repeat Simple_repeat 3 55 0 6 744 198 0 0 0 chr15 20924093 20924115 -82570859 + (TA)n Simple_repeat Simple_repeat 2 23 0 6 744 450 0 0 0 chr15 20924115 20924164 -82570810 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 744 25 0 0 0 chr15 20925413 20925438 -82569536 + AT_rich Low_complexity Low_complexity 1 25 0 6 744 254 362 56 17 chr15 20926002 20926235 -82568739 - MLT1B LTR MaLR -139 251 10 6 744 4567 36 0 5 chr15 20926677 20927271 -82567703 + L1Md_F3 LINE L1 6020 6584 0 6 744 5364 117 50 12 chr15 20927388 20928246 -82566728 + Lx3B LINE L1 6080 6970 -3 6 744 29 0 0 0 chr15 20928252 20928281 -82566693 + AT_rich Low_complexity Low_complexity 1 29 0 6 744 24 53 0 0 chr15 20928507 20928545 -82566429 + AT_rich Low_complexity Low_complexity 1 38 0 6 744 4225 90 9 0 chr15 20928671 20929250 -82565724 - MT2B2 LTR ERVL 0 584 1 6 744 329 291 41 24 chr15 20929941 20930110 -82564864 - L1MDa LINE L1 -4341 2292 2121 6 744 24 32 0 0 chr15 20930118 20930149 -82564825 + AT_rich Low_complexity Low_complexity 1 31 0 6 744 21 36 0 0 chr15 20930224 20930252 -82564722 + AT_rich Low_complexity Low_complexity 1 28 0 6 744 618 294 109 24 chr15 20930279 20930691 -82564283 - L1MDa LINE L1 -4757 1876 1430 6 744 227 226 108 0 chr15 20930741 20930834 -82564140 - L1MDa LINE L1 -5328 1305 1203 6 744 302 50 0 0 chr15 20931267 20931307 -82563667 - Lx3_Mus LINE L1 -587 6422 6383 6 744 332 334 98 31 chr15 20931346 20931673 -82563301 - L1MDa LINE L1 -6244 389 41 6 744 459 143 0 0 chr15 20931849 20931926 -82563048 - URR1B DNA MER1_type 0 225 149 6 744 1031 289 32 44 chr15 20931928 20932272 -82562702 + RMER15 LTR ERVL 199 538 -37 6 744 24 0 0 0 chr15 20933142 20933166 -82561808 + AT_rich Low_complexity Low_complexity 1 24 0 6 744 265 259 35 0 chr15 20934331 20934389 -82560585 + MLT1D LTR MaLR 13 72 -433 6 744 9221 94 46 1 chr15 20934514 20936160 -82558814 - Lx3_Mus LINE L1 -8 7001 5269 6 744 212 0 36 0 chr15 20936160 20936188 -82558786 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 6 744 4466 92 28 3 chr15 20936188 20936220 -82558754 - Lx3_Mus LINE L1 -618 5268 5237 6 744 446 239 34 82 chr15 20936225 20936445 -82558529 + ORR1D1 LTR MaLR 87 379 -5 6 744 387 0 0 0 chr15 20936447 20936490 -82558484 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 744 767 125 14 9 chr15 20937414 20937635 -82557339 + (CA)n Simple_repeat Simple_repeat 1 221 0 6 744 693 155 3 11 chr15 20937646 20937935 -82557039 + (CA)n Simple_repeat Simple_repeat 1 286 0 6 744 369 0 0 0 chr15 20937945 20937986 -82556988 + (GA)n Simple_repeat Simple_repeat 1 41 0 6 744 519 17 0 0 chr15 20938640 20938700 -82556274 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 744 190 116 0 44 chr15 20940282 20940327 -82554647 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 744 28 79 0 0 chr15 20940871 20940934 -82554040 + AT_rich Low_complexity Low_complexity 1 63 0 6 744 330 231 183 21 chr15 20941008 20941101 -82553873 + B3A SINE B2 2 109 -89 6 744 480 59 0 0 chr15 20941135 20941203 -82553771 + (TC)n Simple_repeat Simple_repeat 1 68 0 6 744 279 0 0 0 chr15 20941206 20941237 -82553737 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 744 578 327 47 50 chr15 20941542 20941819 -82553155 + RMER15 LTR ERVL 300 575 0 6 744 28 0 0 0 chr15 20943249 20943277 -82551697 + AT_rich Low_complexity Low_complexity 1 28 0 6 744 580 332 40 5 chr15 20947613 20947813 -82547161 + B3 SINE B2 2 208 -8 6 744 28 61 0 0 chr15 20948614 20948663 -82546311 + AT_rich Low_complexity Low_complexity 1 49 0 6 744 24 53 0 0 chr15 20949184 20949222 -82545752 + AT_rich Low_complexity Low_complexity 1 38 0 6 744 33 25 0 0 chr15 20949322 20949362 -82545612 + AT_rich Low_complexity Low_complexity 1 40 0 6 744 26 64 0 0 chr15 20950040 20950087 -82544887 + AT_rich Low_complexity Low_complexity 1 47 0 6 744 406 350 36 48 chr15 20950319 20950571 -82544403 - Lx7 LINE L1 -471 7225 6977 6 744 462 36 0 0 chr15 20950879 20950935 -82544039 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 6 744 887 53 0 0 chr15 20950937 20951050 -82543924 - B1_Mm SINE Alu -6 141 29 6 744 235 330 0 9 chr15 20951050 20951157 -82543817 + Lx8 LINE L1 7365 7470 -3 6 744 365 193 68 14 chr15 20951320 20951467 -82543507 + (TA)n Simple_repeat Simple_repeat 2 156 0 6 744 22 0 0 0 chr15 20951467 20951489 -82543485 + AT_rich Low_complexity Low_complexity 1 22 0 6 744 1166 314 42 17 chr15 20951496 20951849 -82543125 - ORR1D2 LTR MaLR -7 363 2 7 744 665 330 75 28 chr15 20951922 20952281 -82542693 - RMER5 LTR ERV1 -82 452 77 7 744 770 311 65 26 chr15 20952328 20952635 -82542339 - MTE-int LTR MaLR -1183 397 79 7 744 191 227 15 0 chr15 20952645 20952711 -82542263 + CT-rich Low_complexity Low_complexity 2 68 0 7 744 2664 245 65 11 chr15 20952807 20953512 -82541462 - Lx9 LINE L1 -571 7073 6331 7 744 905 68 0 0 chr15 20953512 20953630 -82541344 + B1_Mm SINE Alu 28 145 -2 7 744 201 39 0 0 chr15 20953630 20953656 -82541318 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 744 242 203 54 47 chr15 20953701 20953830 -82541144 + (TTAA)n Simple_repeat Simple_repeat 4 133 0 7 744 558 298 20 20 chr15 20953900 20954095 -82540879 - Lx6 LINE L1 -87 7373 7179 7 744 397 249 53 60 chr15 20954110 20954375 -82540599 - Lx9 LINE L1 -1409 6235 5973 7 744 790 278 71 9 chr15 20954416 20954627 -82540347 - MTC LTR MaLR -2 419 196 7 744 6374 35 0 3 chr15 20954627 20955378 -82539596 - L1Md_F2 LINE L1 -12 6570 5822 7 744 611 297 71 38 chr15 20955378 20955404 -82539570 - MTC LTR MaLR -225 182 160 7 744 624 250 136 0 chr15 20955431 20955615 -82539359 - MTD LTR MaLR -208 211 3 7 744 517 281 40 23 chr15 20955655 20955830 -82539144 - MTEb LTR MaLR -3 376 199 7 744 464 191 131 7 chr15 20956389 20956526 -82538448 + Lx3C LINE L1 6821 6974 -2 7 744 1003 328 24 3 chr15 20956563 20956893 -82538081 + MTE2b LTR MaLR 3 339 -40 7 744 444 253 44 7 chr15 20956924 20957073 -82537901 + ORR1D2 LTR MaLR 1 163 -196 7 744 230 81 27 0 chr15 20957171 20957208 -82537766 + (GA)n Simple_repeat Simple_repeat 1 38 0 7 744 322 269 62 7 chr15 20958119 20958265 -82536709 + L1MA6 LINE L1 6043 6196 -104 7 744 26 64 0 0 chr15 20959580 20959627 -82535347 + AT_rich Low_complexity Low_complexity 1 47 0 7 744 22 0 0 0 chr15 20959719 20959741 -82535233 + AT_rich Low_complexity Low_complexity 1 22 0 7 744 226 164 0 15 chr15 20959753 20959821 -82535153 - Lx9 LINE L1 -26 7618 7552 7 744 503 217 205 13 chr15 20959925 20960154 -82534820 + Lx9 LINE L1 7371 7643 -1 7 744 23 0 0 0 chr15 20960679 20960702 -82534272 + AT_rich Low_complexity Low_complexity 1 23 0 7 744 26 0 0 0 chr15 20962759 20962785 -82532189 + AT_rich Low_complexity Low_complexity 1 26 0 7 744 229 189 0 0 chr15 20964823 20964876 -82530098 + L1_Mur3 LINE L1 3802 3854 -2026 7 744 2754 120 56 2 chr15 20964866 20964900 -82530074 + Lx3C LINE L1 6339 6374 -602 7 744 334 0 21 21 chr15 20964900 20964947 -82530027 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 7 744 2754 133 57 5 chr15 20964947 20965386 -82529588 + Lx3C LINE L1 6371 6824 -176 7 744 287 167 0 0 chr15 20965371 20965419 -82529555 + Lx3C LINE L1 6741 6788 -188 7 744 254 188 0 0 chr15 20965411 20965459 -82529515 + Lx3B LINE L1 6741 6788 -185 7 744 276 188 0 0 chr15 20965451 20965499 -82529475 + Lx3C LINE L1 6741 6788 -188 7 744 287 167 0 0 chr15 20965491 20965539 -82529435 + Lx3C LINE L1 6741 6788 -188 7 744 229 175 0 0 chr15 20965539 20965579 -82529395 + Lx3C LINE L1 6749 6788 -188 7 744 276 188 0 0 chr15 20965571 20965619 -82529355 + Lx3C LINE L1 6741 6788 -188 7 744 1049 191 65 0 chr15 20965651 20965866 -82529108 + Lx3C LINE L1 6741 6969 -7 7 744 186 43 0 0 chr15 20965868 20965891 -82529083 + (TAA)n Simple_repeat Simple_repeat 1 23 0 7 744 324 0 0 0 chr15 20966354 20966390 -82528584 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 744 216 158 0 0 chr15 20967226 20967264 -82527710 + (TA)n Simple_repeat Simple_repeat 1 38 0 7 744 24 32 0 0 chr15 20967290 20967321 -82527653 + AT_rich Low_complexity Low_complexity 1 31 0 7 744 25 0 0 0 chr15 20968090 20968115 -82526859 + AT_rich Low_complexity Low_complexity 1 25 0 7 744 297 135 0 0 chr15 20968209 20968261 -82526713 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 744 322 321 89 41 chr15 20968395 20968564 -82526410 - B4 SINE B4 -69 223 47 7 744 198 0 0 0 chr15 20970683 20970705 -82524269 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 7 11 1756 176 114 5 chr15 20971206 20971582 -82523392 - L1_Mur2 LINE L1 0 5877 5461 7 745 451 198 109 16 chr15 20971570 20971698 -82523276 - L1_Mur2 LINE L1 -6514 572 433 7 745 23 33 0 0 chr15 20972134 20972164 -82522810 + AT_rich Low_complexity Low_complexity 1 30 0 7 745 237 178 0 0 chr15 20972440 20972485 -82522489 + (TA)n Simple_repeat Simple_repeat 2 46 0 7 745 21 0 0 0 chr15 20974645 20974666 -82520308 + AT_rich Low_complexity Low_complexity 1 21 0 7 745 893 283 152 98 chr15 20975352 20975671 -82519303 + RMER19C LTR ERVK 1 284 -453 7 745 468 51 0 0 chr15 20975671 20975730 -82519244 + (TTA)n Simple_repeat Simple_repeat 2 60 0 7 745 1252 261 13 72 chr15 20975730 20976107 -82518867 + RMER19C LTR ERVK 269 734 -3 7 745 2334 271 65 13 chr15 20977409 20978089 -82516885 - Lx6 LINE L1 0 7460 6746 7 745 558 228 22 14 chr15 20978117 20978255 -82516719 - RMER1C Other Other 0 1342 1204 7 745 194 176 20 0 chr15 20978258 20978309 -82516665 + GA-rich Low_complexity Low_complexity 1 52 0 7 745 922 200 80 14 chr15 20978310 20978523 -82516451 - RMER1C Other Other -118 1224 998 7 745 204 125 0 0 chr15 20979088 20979120 -82515854 + (TA)n Simple_repeat Simple_repeat 2 33 0 7 745 1985 193 31 20 chr15 20980212 20980666 -82514308 - RMER6B LTR ERVK -2 459 1 7 745 305 119 92 61 chr15 20980961 20981059 -82513915 - Lx4A LINE L1 -2 7056 6956 7 745 2464 207 221 5 chr15 20981191 20981748 -82513226 - RLTR33 LTR ERVK 0 678 1 7 745 507 45 0 0 chr15 20981981 20982047 -82512927 + (TG)n Simple_repeat Simple_repeat 1 66 0 7 745 776 240 122 10 chr15 20982574 20982869 -82512105 - Lx7 LINE L1 0 7696 7369 7 745 417 39 0 0 chr15 20983050 20983101 -82511873 + (TA)n Simple_repeat Simple_repeat 1 51 0 7 745 474 18 0 0 chr15 20983152 20983207 -82511767 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 7 745 269 208 13 0 chr15 20983784 20983861 -82511113 + (CA)n Simple_repeat Simple_repeat 1 78 0 7 745 423 0 0 0 chr15 20984855 20984902 -82510072 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 745 333 0 0 0 chr15 20984902 20984938 -82510036 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 745 246 32 0 0 chr15 20985074 20985105 -82509869 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 745 384 22 0 0 chr15 20985105 20985149 -82509825 + (GA)n Simple_repeat Simple_repeat 2 46 0 7 745 202 200 0 41 chr15 20985166 20985239 -82509735 + (TAGG)n Simple_repeat Simple_repeat 1 70 0 7 745 676 86 0 0 chr15 20985669 20985762 -82509212 - L1Md_F2 LINE L1 -1345 4538 4446 7 745 7605 73 5 3 chr15 20985761 20986777 -82508197 + L1Md_F2 LINE L1 4569 5586 -297 7 745 7741 57 2 4 chr15 20986777 20987760 -82507214 + L1Md_F2 LINE L1 5587 6567 -15 7 745 21 82 0 0 chr15 20988805 20988854 -82506120 + AT_rich Low_complexity Low_complexity 1 49 0 7 745 683 182 12 43 chr15 20989095 20989256 -82505718 - RMER6C LTR ERVK 0 690 535 7 745 186 71 0 0 chr15 20989271 20989299 -82505675 + (T)n Simple_repeat Simple_repeat 1 28 0 7 745 410 232 0 29 chr15 20989300 20989402 -82505572 - RMER6C LTR ERVK -197 523 425 7 745 1576 195 9 61 chr15 20989408 20989752 -82505222 - ORR1A3 LTR MaLR 0 326 1 7 745 627 167 48 48 chr15 20989752 20989897 -82505077 - ORR1A3-int LTR MaLR -21 1942 1798 7 745 4960 170 20 31 chr15 20989870 20990773 -82504201 - RMER19B LTR ERVK -9 893 1 7 745 4200 168 57 20 chr15 20990773 20991723 -82503251 - ORR1A3-int LTR MaLR -247 1716 963 7 745 263 71 24 0 chr15 20991723 20991765 -82503209 + (TA)n Simple_repeat Simple_repeat 2 44 0 7 745 8113 37 5 5 chr15 20991765 20993069 -82501905 - L1Md_F3 LINE L1 -24 6560 5257 7 745 849 218 41 20 chr15 20993070 20993314 -82501660 - ORR1A3-int LTR MaLR -997 966 718 7 745 892 179 121 20 chr15 20993320 20993519 -82501455 - MT2B LTR ERVL -345 256 38 7 745 2004 189 57 78 chr15 20993409 20993868 -82501106 - ORR1A3-int LTR MaLR -1232 731 283 7 745 22 0 0 0 chr15 20993926 20993948 -82501026 + AT_rich Low_complexity Low_complexity 1 22 0 7 745 3231 77 11 42 chr15 20994162 20994620 -82500354 - L1_Mus2 LINE L1 0 6566 6123 7 745 2711 67 17 0 chr15 20994620 20994981 -82499993 + L1_Mus2 LINE L1 5653 6019 -547 7 745 399 41 0 0 chr15 20995274 20995323 -82499651 + (TATG)n Simple_repeat Simple_repeat 3 51 0 7 745 233 242 32 16 chr15 20995327 20995390 -82499584 + MLT1G1 LTR MaLR 323 386 -193 7 745 603 0 0 0 chr15 20995703 20995770 -82499204 + (TC)n Simple_repeat Simple_repeat 2 68 0 7 745 643 159 109 43 chr15 20996980 20997118 -82497856 + B1_Mur3 SINE Alu 3 149 0 7 745 223 189 0 19 chr15 20997123 20997177 -82497797 + A-rich Low_complexity Low_complexity 2 54 0 7 745 291 93 0 0 chr15 20997615 20997658 -82497316 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 745 562 315 74 15 chr15 20998965 20999236 -82495738 - Lx8 LINE L1 -355 7118 6832 7 745 3921 83 4 6 chr15 20999465 21000000 -82494974 - L1Md_F2 LINE L1 -1 6581 6048 7 745 818 78 17 0 chr15 21000000 21000116 -82494858 - L1Md_F2 LINE L1 -535 6047 5930 1 745 227 191 21 0 chr15 21000289 21000336 -82494638 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 745 411 253 92 40 chr15 21000370 21000522 -82494452 + RMER30 DNA MER1_type 5 164 -38 3 745 258 231 0 0 chr15 21000672 21000724 -82494250 - Lx5 LINE L1 -172 6878 6827 4 745 2778 276 48 42 chr15 21002209 21002367 -82492607 - RMER1C Other Other -1 1341 1197 5 745 198 0 0 0 chr15 21002367 21002389 -82492585 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 6 745 2778 276 48 42 chr15 21002389 21003159 -82491815 - RMER1C Other Other -146 1196 407 5 745 343 314 0 0 chr15 21003160 21003246 -82491728 - RMER1C Other Other -766 576 491 7 745 231 308 55 46 chr15 21003451 21003560 -82491414 - RMER1B Other Other -908 158 49 7 745 414 0 0 0 chr15 21003760 21003806 -82491168 + (TG)n Simple_repeat Simple_repeat 2 47 0 8 745 388 353 69 11 chr15 21003900 21003959 -82491015 - B4A SINE B4 -83 209 151 9 745 464 99 0 24 chr15 21003959 21004042 -82490932 - L1Md_F2 LINE L1 0 6582 6502 1 745 388 353 69 11 chr15 21004042 21004171 -82490803 - B4A SINE B4 -142 150 11 9 745 465 303 60 27 chr15 21006512 21006695 -82488279 - Lx8 LINE L1 -705 6768 6580 1 745 34 0 0 0 chr15 21006779 21006813 -82488161 + AT_rich Low_complexity Low_complexity 1 34 0 1 745 315 387 23 23 chr15 21006820 21007079 -82487895 - L1MCa LINE L1 -4746 1762 1504 1 745 25 0 0 0 chr15 21007109 21007134 -82487840 + AT_rich Low_complexity Low_complexity 1 25 0 1 745 993 67 89 0 chr15 21007139 21007274 -82487700 - B1_Mus2 SINE Alu 0 147 1 1 745 1071 137 63 0 chr15 21007327 21007502 -82487472 - B2_Mm1t SINE B2 -6 187 2 1 745 591 307 58 28 chr15 21007502 21007964 -82487010 - L1_Mur3 LINE L1 -4159 1721 1246 1 745 225 139 0 0 chr15 21008406 21008449 -82486525 + (CATA)n Simple_repeat Simple_repeat 2 44 0 1 745 898 99 13 7 chr15 21008652 21008805 -82486169 - L1_Mus3 LINE L1 -1 6637 6484 1 745 1978 74 0 18 chr15 21008805 21009080 -82485894 - L1_Mus3 LINE L1 -583 6055 5786 1 745 245 139 12 122 chr15 21009079 21009161 -82485813 + L1_Mus3 LINE L1 5736 5808 -830 1 745 24 0 0 0 chr15 21009285 21009309 -82485665 + AT_rich Low_complexity Low_complexity 1 24 0 2 745 28 0 0 0 chr15 21009435 21009463 -82485511 + AT_rich Low_complexity Low_complexity 1 28 0 2 745 27 49 0 0 chr15 21010625 21010666 -82484308 + AT_rich Low_complexity Low_complexity 1 41 0 2 745 504 0 0 0 chr15 21010812 21010868 -82484106 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 745 417 109 0 0 chr15 21012258 21012322 -82482652 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 745 6243 145 34 6 chr15 21014967 21016048 -82478926 - Lx LINE L1 0 6654 5544 2 745 2156 205 22 58 chr15 21016050 21016583 -82478391 - RLTR11A2 LTR ERVK 0 527 14 2 745 413 305 63 58 chr15 21016690 21016864 -82478110 - MTE2a LTR MaLR -4 375 201 2 745 350 380 41 33 chr15 21016879 21017144 -82477830 - MTE2a LTR MaLR -148 231 1 2 745 2451 192 59 10 chr15 21017190 21017695 -82477279 - RMER6D LTR ERVK -1 719 190 2 745 216 0 0 0 chr15 21017755 21017779 -82477195 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 2 745 180 0 0 0 chr15 21017779 21017799 -82477175 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 3 745 351 335 104 64 chr15 21018001 21018221 -82476753 + RMER2 LTR ERV1 308 536 -31 3 745 1082 144 28 6 chr15 21018245 21018427 -82476547 - RMER6D LTR ERVK -529 191 6 3 745 547 133 9 9 chr15 21019568 21019674 -82475300 + (CATA)n Simple_repeat Simple_repeat 2 107 0 3 745 596 317 68 51 chr15 21019681 21019977 -82474997 - MLT2C1 LTR ERVL -73 324 24 3 745 224 30 30 0 chr15 21020478 21020511 -82474463 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 745 389 362 121 26 chr15 21021162 21021426 -82473548 + B4 SINE B4 4 292 0 3 745 3932 95 33 22 chr15 21021495 21021950 -82473024 + L1_Mus2 LINE L1 5981 6450 -116 3 745 2436 67 2 202 chr15 21021950 21022435 -82472539 + RLTR10 LTR ERVK 1 388 -2 3 745 3932 95 33 22 chr15 21022435 21022558 -82472416 + L1_Mus2 LINE L1 6451 6565 -1 3 745 8863 89 19 7 chr15 21023028 21024940 -82470034 - L1_Mus1 LINE L1 -46 6521 4595 3 745 23 0 0 0 chr15 21024954 21024977 -82469997 + AT_rich Low_complexity Low_complexity 1 23 0 4 745 3044 188 46 46 chr15 21024977 21025611 -82469363 - Lx4A LINE L1 -11 7047 6414 4 745 416 196 65 9 chr15 21025611 21025719 -82469255 - MTC LTR MaLR -307 114 1 4 745 1162 268 48 27 chr15 21026720 21027158 -82467816 + RCHARR1 DNA MER1_type 522 968 -6 4 745 24 77 0 0 chr15 21027582 21027634 -82467340 + AT_rich Low_complexity Low_complexity 1 52 0 4 745 413 299 23 0 chr15 21028723 21028897 -82466077 + GA-rich Low_complexity Low_complexity 1 178 0 4 745 1709 314 53 14 chr15 21029210 21029940 -82465034 + Lx9 LINE L1 6569 7327 -317 4 745 1665 234 172 20 chr15 21029944 21030431 -82464543 - RLTR20B1 LTR ERVK 0 563 3 4 745 493 220 60 0 chr15 21030433 21030533 -82464441 + Lx9 LINE L1 7323 7428 -216 4 745 375 23 0 0 chr15 21030543 21030587 -82464387 + (TA)n Simple_repeat Simple_repeat 1 44 0 4 745 351 200 22 11 chr15 21030606 21030697 -82464277 + Lx9 LINE L1 7533 7624 -20 4 745 1725 76 0 12 chr15 21030705 21030945 -82464029 + RLTRETN_Mm LTR ERVK 1 237 -85 4 745 2225 19 8 0 chr15 21030945 21031204 -82463770 - ETnERV-int LTR ERVK -2877 437 177 5 745 770 232 0 0 chr15 21032827 21032969 -82462005 - B1_Mur1 SINE Alu -6 143 2 5 745 347 41 20 0 chr15 21033210 21033259 -82461715 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 745 492 276 79 24 chr15 21033278 21033404 -82461570 - RSINE1 SINE B4 -22 143 11 5 745 23 33 0 0 chr15 21033971 21034001 -82460973 + AT_rich Low_complexity Low_complexity 1 30 0 5 745 492 254 63 21 chr15 21034459 21034503 -82460471 + B3A SINE B2 2 43 -155 5 745 193 0 94 0 chr15 21034503 21034535 -82460439 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 745 492 254 63 21 chr15 21034535 21034679 -82460295 + B3A SINE B2 44 197 -1 5 745 1026 168 26 5 chr15 21036217 21036372 -82458602 + B2_Mm2 SINE B2 1 155 -40 5 745 279 0 0 0 chr15 21036372 21036403 -82458571 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 5 745 1026 168 26 5 chr15 21036403 21036438 -82458536 + B2_Mm2 SINE B2 156 194 -1 5 745 181 342 85 37 chr15 21036695 21036777 -82458197 + L2 LINE L2 503 588 -2831 5 745 184 369 55 48 chr15 21036746 21036911 -82458063 + MIRc SINE MIR 97 262 -6 6 745 862 293 79 50 chr15 21037290 21037786 -82457188 - Lx9 LINE L1 -39 7605 7096 6 745 204 40 0 0 chr15 21037786 21037811 -82457163 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 6 745 23 0 0 0 chr15 21037891 21037914 -82457060 + AT_rich Low_complexity Low_complexity 1 23 0 6 745 592 264 8 0 chr15 21038186 21038307 -82456667 + RSINE1 SINE B4 6 127 -38 6 745 1221 136 0 0 chr15 21038808 21039007 -82455967 - Lx LINE L1 -9 6645 6447 6 745 369 0 0 0 chr15 21039697 21039738 -82455236 + (TC)n Simple_repeat Simple_repeat 1 41 0 6 745 339 25 0 0 chr15 21039738 21039777 -82455197 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 745 351 0 0 0 chr15 21040295 21040334 -82454640 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 745 25 31 0 0 chr15 21042331 21042363 -82452611 + AT_rich Low_complexity Low_complexity 1 32 0 6 745 231 61 0 0 chr15 21043388 21043421 -82451553 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 7 745 275 276 0 0 chr15 21043668 21043726 -82451248 + ID4 SINE ID 12 69 -14 7 745 347 0 23 0 chr15 21043727 21043770 -82451204 + (TC)n Simple_repeat Simple_repeat 2 45 0 7 745 196 143 18 18 chr15 21043835 21043892 -82451082 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 745 961 19 0 0 chr15 21044123 21044230 -82450744 + U6 snRNA snRNA 1 107 0 7 745 3801 44 0 0 chr15 21044230 21044688 -82450286 + L1Md_T LINE L1 6124 6581 -1 7 745 327 181 36 0 chr15 21044692 21044775 -82450199 + SYNREP_MM Satellite Satellite 69 154 -112 7 745 204 97 0 0 chr15 21045063 21045094 -82449880 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 745 296 368 22 44 chr15 21045096 21045236 -82449738 + B3 SINE B2 55 187 -11 7 745 441 0 0 0 chr15 21045338 21045387 -82449587 + (GA)n Simple_repeat Simple_repeat 2 50 0 7 745 184 350 55 55 chr15 21046134 21046243 -82448731 + MIRb SINE MIR 6 114 -154 8 745 441 359 12 36 chr15 21047537 21047702 -82447272 - RSINE1 SINE B4 -2 163 3 8 745 8663 118 45 3 chr15 21048173 21049606 -82445368 - Lx3A LINE L1 -2 6979 5490 8 745 1464 150 26 4 chr15 21049611 21049878 -82445096 - Lx2 LINE L1 -1 6996 6724 8 745 982 114 52 39 chr15 21049878 21050033 -82444941 + Lx2 LINE L1 6507 6663 -334 8 745 282 143 63 0 chr15 21051140 21051203 -82443771 + ORR1B1 LTR MaLR 47 113 -281 8 745 344 107 71 0 chr15 21051179 21051235 -82443739 + ORR1B1 LTR MaLR 331 390 -4 8 745 219 36 0 0 chr15 21051867 21051895 -82443079 + (TC)n Simple_repeat Simple_repeat 2 29 0 8 745 552 15 0 0 chr15 21051899 21051964 -82443010 + (TG)n Simple_repeat Simple_repeat 2 66 0 8 745 202 61 61 0 chr15 21052216 21052249 -82442725 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 745 459 0 0 0 chr15 21052959 21053010 -82441964 + (TC)n Simple_repeat Simple_repeat 1 51 0 8 745 304 253 13 0 chr15 21054411 21054490 -82440484 + (TG)n Simple_repeat Simple_repeat 1 80 0 8 745 3943 82 16 4 chr15 21054584 21055135 -82439839 - L1_Mus3 LINE L1 -6 6632 6075 9 745 248 257 0 13 chr15 21056189 21056249 -82438725 + (CA)n Simple_repeat Simple_repeat 2 60 0 9 745 546 43 0 0 chr15 21056249 21056318 -82438656 + (CCA)n Simple_repeat Simple_repeat 3 71 0 9 745 248 257 0 13 chr15 21056318 21056332 -82438642 + (CA)n Simple_repeat Simple_repeat 1 14 0 9 745 1359 6 0 32 chr15 21056518 21056704 -82438270 + (TG)n Simple_repeat Simple_repeat 1 180 0 9 745 21 0 0 0 chr15 21056952 21056973 -82438001 + AT_rich Low_complexity Low_complexity 1 21 0 9 745 24 32 0 0 chr15 21057382 21057413 -82437561 + AT_rich Low_complexity Low_complexity 1 31 0 9 745 667 335 30 5 chr15 21058511 21058709 -82436265 - B3 SINE B2 0 216 14 9 745 307 65 16 16 chr15 21058925 21058988 -82435986 + L1Md_F3 LINE L1 6522 6584 0 9 745 204 67 0 0 chr15 21058991 21059021 -82435953 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 9 745 498 292 0 9 chr15 21059370 21059477 -82435497 - RSINE1 SINE B4 -21 144 39 1 745 356 297 214 25 chr15 21062821 21063084 -82431890 + Lx5 LINE L1 6700 7012 -38 1 745 240 319 99 0 chr15 21063148 21063239 -82431735 - B4A SINE B4 -192 100 1 1 745 221 200 14 41 chr15 21064132 21064205 -82430769 + A-rich Low_complexity Low_complexity 3 73 0 1 745 336 48 0 0 chr15 21066188 21066230 -82428744 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 745 277 376 46 92 chr15 21066880 21067208 -82427766 + ORR1E LTR MaLR 6 318 -41 1 745 24 53 0 0 chr15 21067267 21067305 -82427669 + AT_rich Low_complexity Low_complexity 1 38 0 1 745 1594 245 12 21 chr15 21067898 21068236 -82426738 - Lx5 LINE L1 -137 6913 6579 1 745 254 112 0 0 chr15 21068239 21068283 -82426691 + Lx5 LINE L1 6538 6605 -453 1 745 313 288 12 0 chr15 21068309 21068389 -82426585 - ID4 SINE ID 0 83 3 1 745 25 31 0 0 chr15 21069358 21069390 -82425584 + AT_rich Low_complexity Low_complexity 1 32 0 1 745 1092 62 14 0 chr15 21069848 21069993 -82424981 + B1_Mm SINE Alu 1 147 0 1 745 242 56 28 0 chr15 21069993 21070029 -82424945 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 1 745 974 93 0 19 chr15 21070926 21071080 -82423894 + L1_Mus2 LINE L1 6416 6566 0 1 745 26 0 0 0 chr15 21071372 21071398 -82423576 + AT_rich Low_complexity Low_complexity 1 26 0 1 745 314 350 32 24 chr15 21072054 21072177 -82422797 + RSINE1 SINE B4 4 127 -38 1 745 21 57 0 0 chr15 21072390 21072425 -82422549 + AT_rich Low_complexity Low_complexity 1 35 0 1 745 243 161 0 0 chr15 21074004 21074060 -82420914 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 745 474 242 76 38 chr15 21074364 21074574 -82420400 - Lx7 LINE L1 -1 7695 7478 1 745 459 0 0 0 chr15 21075461 21075512 -82419462 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 745 195 162 0 0 chr15 21077324 21077361 -82417613 + A-rich Low_complexity Low_complexity 1 37 0 1 745 1131 77 0 0 chr15 21077618 21077761 -82417213 + B1_Mm SINE Alu 5 147 0 1 745 222 37 0 0 chr15 21077777 21077804 -82417170 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 1 745 3004 182 21 39 chr15 21077852 21078468 -82416506 - RLTR1D LTR ERV1 0 605 1 1 745 21 71 0 0 chr15 21078666 21078708 -82416266 + AT_rich Low_complexity Low_complexity 1 42 0 1 745 17140 136 11 34 chr15 21078873 21082540 -82412434 - L1VL4 LINE L1 -1629 4254 667 1 745 21 36 0 0 chr15 21084768 21084796 -82410178 + AT_rich Low_complexity Low_complexity 1 28 0 1 745 670 313 61 0 chr15 21085704 21085934 -82409040 + Lx6 LINE L1 7217 7460 0 1 745 618 51 0 0 chr15 21087191 21087269 -82407705 + (TC)n Simple_repeat Simple_repeat 1 78 0 1 745 6073 42 2 1 chr15 21087512 21088425 -82406549 - L1Md_F2 LINE L1 -521 6061 5148 1 745 3760 41 7 0 chr15 21088425 21088885 -82406089 + L1Md_F2 LINE L1 6119 6581 -1 1 745 6073 47 1 1 chr15 21088885 21088899 -82406075 - L1Md_F2 LINE L1 -736 5147 5135 1 745 266 329 18 55 chr15 21088929 21089093 -82405881 - Lx9 LINE L1 -215 7429 7272 1 745 6769 97 19 43 chr15 21089120 21090168 -82404806 - L1_Mus3 LINE L1 0 6638 5616 1 745 406 273 44 75 chr15 21090182 21090408 -82404566 - Lx9 LINE L1 -528 7116 6898 1 745 955 217 24 76 chr15 21090804 21091053 -82403921 - MT2A LTR ERVL -297 236 1 1 745 321 261 22 22 chr15 21091053 21091125 -82403849 - ID_B1 SINE B4 -50 174 103 1 745 201 94 0 0 chr15 21091541 21091573 -82403401 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 745 27 0 0 0 chr15 21091606 21091633 -82403341 + AT_rich Low_complexity Low_complexity 1 27 0 1 745 26 50 0 0 chr15 21092011 21092051 -82402923 + AT_rich Low_complexity Low_complexity 1 40 0 1 745 22 0 0 0 chr15 21092144 21092166 -82402808 + AT_rich Low_complexity Low_complexity 1 22 0 1 745 21 71 0 0 chr15 21092211 21092253 -82402721 + AT_rich Low_complexity Low_complexity 1 42 0 1 745 6527 38 1 0 chr15 21093235 21094018 -82400956 + L1Md_A LINE L1 5799 6582 0 1 745 226 303 22 22 chr15 21094215 21094306 -82400668 + MLT1B LTR MaLR 279 369 -21 1 745 240 111 0 0 chr15 21094923 21094959 -82400015 + (CCA)n Simple_repeat Simple_repeat 3 38 0 1 745 302 229 10 0 chr15 21095024 21095120 -82399854 + (TATG)n Simple_repeat Simple_repeat 2 98 0 1 745 551 345 39 108 chr15 21095142 21095423 -82399551 - B4 SINE B4 -11 281 21 1 745 1623 271 24 28 chr15 21095423 21095883 -82399091 + MT2A LTR ERVL 1 458 -75 1 745 249 98 0 0 chr15 21096134 21096175 -82398799 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 1 745 1057 96 0 7 chr15 21096362 21096509 -82398465 + B1_Mm SINE Alu 2 147 0 1 745 2604 82 18 23 chr15 21096880 21097268 -82397706 - Lx LINE L1 -2 6652 6267 1 745 225 143 41 0 chr15 21097657 21097706 -82397268 + T-rich Low_complexity Low_complexity 3 53 0 1 745 805 220 6 12 chr15 21099803 21099973 -82395001 - URR1A DNA MER1_type 0 226 58 1 745 255 366 44 40 chr15 21100138 21100363 -82394611 - MTEa LTR MaLR -37 342 117 1 745 279 0 0 0 chr15 21100646 21100677 -82394297 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 745 1448 281 34 29 chr15 21101618 21102032 -82392942 + MTC LTR MaLR 6 421 0 1 745 985 345 37 5 chr15 21102091 21102528 -82392446 + Lx7 LINE L1 6905 7355 -341 1 93 17521 47 6 0 chr15 21102591 21105455 -82389519 - L1Md_F2 LINE L1 -2 6580 3699 1 746 3787 44 0 0 chr15 21105455 21105931 -82389043 + L1Md_F2 LINE L1 3215 3690 -2193 1 746 23 0 0 0 chr15 21106230 21106253 -82388721 + AT_rich Low_complexity Low_complexity 1 23 0 1 746 1241 204 21 130 chr15 21106253 21106370 -82388604 - Lx2B LINE L1 -5 6995 6882 1 746 2965 84 12 12 chr15 21106370 21106791 -82388183 - BGLII LTR ERVK 0 421 1 1 746 1241 204 21 130 chr15 21106791 21107051 -82387923 - Lx2B LINE L1 -119 6881 6659 1 746 3552 165 65 7 chr15 21107037 21107739 -82387235 - L1_Mur2 LINE L1 -1012 4865 4123 1 746 1016 152 11 0 chr15 21107736 21107913 -82387061 + L1_Mur2 LINE L1 3726 3904 -1973 1 746 209 190 0 23 chr15 21108965 21109008 -82385966 + (ATG)n Simple_repeat Simple_repeat 1 42 0 1 746 279 0 0 0 chr15 21113048 21113079 -82381895 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 746 220 169 28 14 chr15 21114041 21114113 -82380861 + T-rich Low_complexity Low_complexity 1 73 0 1 746 198 0 0 0 chr15 21114200 21114222 -82380752 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 746 186 43 0 0 chr15 21114384 21114407 -82380567 + (CAT)n Simple_repeat Simple_repeat 3 25 0 1 746 1319 188 12 12 chr15 21115507 21115765 -82379209 - RLTR22_Mur LTR ERVK 0 1848 1591 1 746 3534 191 60 18 chr15 21115926 21116747 -82378227 - RLTR22_Mur LTR ERVK -990 858 4 1 746 666 309 81 75 chr15 21116780 21117102 -82377872 + ORR1E LTR MaLR 2 325 -34 1 746 402 329 98 37 chr15 21117677 21117841 -82377133 - MTE2b LTR MaLR -97 282 109 1 746 392 322 197 0 chr15 21117867 21118019 -82376955 + MTD LTR MaLR 1 182 -237 1 746 877 129 0 38 chr15 21118123 21118308 -82376666 + GA-rich Low_complexity Low_complexity 3 180 0 1 746 375 23 0 0 chr15 21118308 21118352 -82376622 + (GGAA)n Simple_repeat Simple_repeat 1 44 0 1 746 365 234 20 4 chr15 21118505 21118611 -82376363 - MTE2b LTR MaLR -265 114 5 1 746 21 0 0 0 chr15 21119803 21119824 -82375150 + AT_rich Low_complexity Low_complexity 1 21 0 1 746 405 58 0 0 chr15 21120086 21120138 -82374836 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 746 624 262 141 0 chr15 21120681 21120887 -82374087 - Lx2B LINE L1 -10 6990 6756 1 746 236 196 0 0 chr15 21120885 21120931 -82374043 - Lx3B LINE L1 -282 6691 6646 1 746 1190 268 36 72 chr15 21121041 21121431 -82373543 + RLTR14 LTR ERV1 7 382 0 1 746 322 306 50 10 chr15 21121548 21121647 -82373327 + PB1D7 SINE Alu 17 119 -1 1 746 885 124 0 0 chr15 21121999 21122160 -82372814 + (GA)n Simple_repeat Simple_repeat 2 162 0 1 746 193 29 59 0 chr15 21122526 21122560 -82372414 + (TTG)n Simple_repeat Simple_repeat 2 37 0 1 746 598 248 74 25 chr15 21123236 21123480 -82371494 - ORR1A3-int LTR MaLR -990 973 718 1 746 260 206 0 191 chr15 21123434 21123518 -82371456 - MT2B LTR ERVL -309 292 225 1 746 608 157 12 141 chr15 21123534 21123697 -82371277 - ORR1B1 LTR MaLR -226 168 1 1 746 302 115 19 0 chr15 21125318 21125370 -82369604 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 746 480 328 82 46 chr15 21125786 21126010 -82368964 + MTE2a LTR MaLR 39 275 -104 1 746 1389 117 21 38 chr15 21126010 21126250 -82368724 - Lx LINE L1 -5 6649 6414 1 746 480 328 82 46 chr15 21126250 21126354 -82368620 + MTE2a LTR MaLR 276 379 0 1 746 448 288 37 68 chr15 21127431 21127465 -82367509 - MLT1A0 LTR MaLR 0 365 333 1 746 6325 61 7 22 chr15 21127465 21127884 -82367090 - RLTR13B2 LTR ERVK 0 822 404 1 746 198 0 0 0 chr15 21127884 21127906 -82367068 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 746 6325 61 7 22 chr15 21127906 21128320 -82366654 - RLTR13B2 LTR ERVK -419 403 2 1 746 448 288 37 68 chr15 21128320 21128475 -82366499 - MLT1A0 LTR MaLR -33 332 182 1 746 279 0 0 0 chr15 21128620 21128651 -82366323 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 746 491 287 123 111 chr15 21128882 21129054 -82365920 + MTE2b LTR MaLR 43 186 -193 1 746 198 0 0 0 chr15 21129054 21129076 -82365898 + (GA)n Simple_repeat Simple_repeat 2 23 0 1 746 491 287 123 111 chr15 21129076 21129236 -82365738 + MTE2b LTR MaLR 187 379 0 1 746 241 376 59 0 chr15 21129946 21130132 -82364842 + MLT2B4 LTR ERVL 289 485 -71 1 746 274 326 42 49 chr15 21130236 21130378 -82364596 + ID_B1 SINE B4 83 223 -1 1 746 253 297 67 29 chr15 21130678 21130782 -82364192 - LTR40a LTR ERVL -397 122 15 1 746 227 314 158 24 chr15 21131136 21131263 -82363711 + MamGypLTR1b LTR Gypsy 216 359 -423 1 746 763 327 39 56 chr15 21131264 21131623 -82363351 + Lx8 LINE L1 7119 7471 -2 1 746 2372 224 33 18 chr15 21133370 21133916 -82361058 - Lx5 LINE L1 0 7050 6497 1 746 369 0 0 0 chr15 21134635 21134676 -82360298 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 746 374 319 28 43 chr15 21134695 21134836 -82360138 - RSINE1 SINE B4 -5 160 22 1 746 4186 94 3 0 chr15 21134881 21135457 -82359517 - L1_Mus4 LINE L1 -7 6629 6052 1 746 837 83 0 0 chr15 21136893 21137025 -82357949 + (TAGA)n Simple_repeat Simple_repeat 4 135 0 2 746 726 329 45 58 chr15 21139273 21139672 -82355302 - MTE2a LTR MaLR -18 401 8 2 746 3287 82 2 4 chr15 21140086 21140541 -82354433 + L1_Mus1 LINE L1 6114 6567 0 2 746 7319 53 3 3 chr15 21140632 21141563 -82353411 - L1Md_F2 LINE L1 -6 6576 5646 2 746 306 100 0 0 chr15 21141559 21141599 -82353375 + L1Md_F2 LINE L1 5607 5646 -938 2 746 984 247 50 37 chr15 21141596 21141974 -82353000 - Lx7 LINE L1 -7 7689 7307 2 746 573 28 0 0 chr15 21144038 21144109 -82350865 + (TC)n Simple_repeat Simple_repeat 1 71 0 2 746 465 19 0 0 chr15 21144109 21144162 -82350812 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 746 22 56 0 0 chr15 21144345 21144381 -82350593 + AT_rich Low_complexity Low_complexity 1 36 0 2 746 426 352 19 77 chr15 21145288 21145497 -82349477 - B3A SINE B2 0 198 2 2 746 468 317 49 7 chr15 21145529 21145672 -82349302 + RSINE1 SINE B4 7 155 -10 2 746 318 148 0 0 chr15 21145689 21145743 -82349231 + (ATG)n Simple_repeat Simple_repeat 2 55 0 2 746 252 343 36 0 chr15 21146470 21146607 -82348367 - L1MA5 LINE L1 -295 6005 5864 2 746 265 296 55 23 chr15 21146747 21146875 -82348099 - L1M2 LINE L1 -2012 4131 4000 2 746 721 338 34 75 chr15 21146920 21147307 -82347667 + MTEa LTR MaLR 9 379 0 2 746 393 290 57 24 chr15 21147559 21147771 -82347203 - L1M2 LINE L1 -2543 3600 3382 2 746 348 43 0 0 chr15 21148033 21148079 -82346895 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 746 2338 118 35 8 chr15 21148423 21148797 -82346177 - Lx LINE L1 -5 6649 6266 2 746 299 247 275 12 chr15 21148814 21148974 -82346000 + Lx8 LINE L1 7261 7462 -11 2 746 350 370 62 62 chr15 21148995 21149401 -82345573 + MER34 LTR ERV1 76 481 -61 2 746 600 318 52 49 chr15 21149584 21149931 -82345043 - LTR40b LTR ERVL 0 462 115 2 746 229 188 15 30 chr15 21150030 21150096 -82344878 - Lx3C LINE L1 -789 6187 6123 2 746 398 322 8 25 chr15 21150517 21150638 -82344336 + RSINE1 SINE B4 14 132 -33 2 746 420 20 0 0 chr15 21150641 21150690 -82344284 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 746 240 35 0 0 chr15 21150690 21150718 -82344256 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 746 3970 107 37 3 chr15 21151382 21151947 -82343027 - MT2B2 LTR ERVL 0 584 1 2 746 21 57 0 0 chr15 21152205 21152240 -82342734 + AT_rich Low_complexity Low_complexity 1 35 0 2 746 330 87 0 0 chr15 21152365 21152411 -82342563 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 746 599 302 6 0 chr15 21152709 21152871 -82342103 + MLT1C LTR MaLR 302 464 -3 2 746 304 359 0 22 chr15 21152936 21153070 -82341904 + B1F2 SINE Alu 10 140 -9 2 746 408 20 0 0 chr15 21154413 21154462 -82340512 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 746 22 56 0 0 chr15 21155877 21155913 -82339061 + AT_rich Low_complexity Low_complexity 1 36 0 2 746 372 43 0 0 chr15 21155913 21155959 -82339015 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 746 206 93 0 85 chr15 21156313 21156360 -82338614 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2 746 1029 192 61 161 chr15 21157060 21157439 -82337535 - RMER20B LTR ERVK 0 627 287 2 746 5713 111 2 9 chr15 21157442 21158321 -82336653 - L1_Mm LINE L1 -1557 4326 3454 2 746 7196 84 18 1 chr15 21158319 21159463 -82335511 + L1_Mus2 LINE L1 5408 6566 0 2 746 1083 251 28 14 chr15 21159473 21159756 -82335218 - RMER20B LTR ERVK -332 295 9 2 746 425 244 109 58 chr15 21160568 21160742 -82334232 - RMER2 LTR ERV1 0 567 385 2 746 529 122 0 0 chr15 21160743 21160817 -82334157 + L1_Mus2 LINE L1 6356 6429 -137 2 746 342 85 0 0 chr15 21161367 21161414 -82333560 - HAL1-3A_ME LINE L1 -837 2021 1975 2 746 188 0 0 69 chr15 21161414 21161443 -82333531 + (TATG)n Simple_repeat Simple_repeat 4 30 0 2 746 189 74 0 0 chr15 21161550 21161577 -82333397 + (A)n Simple_repeat Simple_repeat 1 27 0 2 746 1197 62 0 0 chr15 21162845 21162991 -82331983 + B1_Mm SINE Alu 2 147 0 2 746 1968 125 13 3 chr15 21163203 21163515 -82331459 - L1_Mus4 LINE L1 -4 6632 6318 2 746 304 331 62 31 chr15 21163630 21163758 -82331216 - ID_B1 SINE B4 0 224 93 2 746 259 197 15 29 chr15 21164244 21164312 -82330662 - Lx8 LINE L1 -6 7467 7401 2 746 246 330 87 67 chr15 21164384 21164637 -82330337 - Lx8 LINE L1 -50 7423 7166 2 746 245 243 0 54 chr15 21165255 21165329 -82329645 + (TATATG)n Simple_repeat Simple_repeat 4 73 0 2 746 670 23 0 22 chr15 21165826 21165916 -82329058 + (TCTA)n Simple_repeat Simple_repeat 2 89 0 2 746 218 385 49 8 chr15 21166282 21166405 -82328569 - B4A SINE B4 -156 136 9 2 746 306 0 0 0 chr15 21166561 21166595 -82328379 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 746 360 329 32 45 chr15 21168191 21168347 -82326627 - RSINE1 SINE B4 0 165 12 2 746 311 0 0 25 chr15 21168659 21168699 -82326275 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 746 321 226 129 35 chr15 21169233 21169403 -82325571 - Lx9 LINE L1 -8 7636 7451 2 746 2489 208 122 60 chr15 21170430 21171279 -82323695 - RLTR13D6 LTR ERVK 0 902 1 2 746 327 49 0 0 chr15 21171338 21171379 -82323595 + (TA)n Simple_repeat Simple_repeat 1 41 0 2 746 193 331 58 36 chr15 21171383 21171521 -82323453 - L4 LINE RTE -130 1899 1759 2 746 409 294 59 0 chr15 21172284 21172420 -82322554 - MIR SINE MIR -1 261 118 2 746 328 286 10 0 chr15 21172917 21173015 -82321959 - ERVL-int LTR ERVL -71 5686 5588 2 746 1750 335 51 51 chr15 21173058 21174377 -82320597 + Lx9 LINE L1 5468 6973 -671 2 746 2251 114 147 26 chr15 21174377 21174807 -82320167 - RLTR45 LTR ERVK 0 482 1 2 746 1750 335 29 59 chr15 21174807 21175265 -82319709 + Lx9 LINE L1 6974 7423 -221 2 746 393 331 52 16 chr15 21175571 21175764 -82319210 + Lx9 LINE L1 6994 7193 -451 2 746 273 221 0 0 chr15 21175881 21175949 -82319025 + (CA)n Simple_repeat Simple_repeat 1 68 0 2 746 2194 320 89 67 chr15 21176041 21178336 -82316638 - ERVL-B4-int LTR ERVL -2841 2873 464 2 746 627 26 0 0 chr15 21178344 21178421 -82316553 + (CA)n Simple_repeat Simple_repeat 2 78 0 2 746 526 175 28 7 chr15 21178882 21179026 -82315948 + GA-rich Low_complexity Low_complexity 1 147 0 2 746 338 405 0 18 chr15 21179040 21179211 -82315763 - MLT2C1 LTR ERVL -103 294 127 2 746 293 296 143 0 chr15 21179442 21179540 -82315434 + PB1D9 SINE Alu 1 112 -8 2 746 330 26 0 0 chr15 21180397 21180436 -82314538 + (TGG)n Simple_repeat Simple_repeat 1 39 0 2 746 367 365 48 131 chr15 21180437 21180749 -82314225 - ORR1D2 LTR MaLR -67 303 18 2 746 24 32 0 0 chr15 21183620 21183651 -82311323 + AT_rich Low_complexity Low_complexity 1 31 0 2 746 212 315 54 43 chr15 21185579 21185672 -82309302 - PB1D10 SINE Alu 0 117 24 2 746 372 94 0 0 chr15 21186092 21186145 -82308829 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 746 3362 176 48 48 chr15 21187666 21188422 -82306552 - RMER6A LTR ERVK 0 756 1 2 746 422 49 16 0 chr15 21188485 21188546 -82306428 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 746 262 326 0 10 chr15 21189880 21189976 -82304998 + GA-rich Low_complexity Low_complexity 3 97 0 2 746 333 226 0 70 chr15 21191702 21191802 -82303172 + MTD LTR MaLR 8 100 -321 2 746 35255 35 1 0 chr15 21191802 21197013 -82297961 + L1Md_T LINE L1 279 5589 -297 2 746 8849 9 0 0 chr15 21197013 21198009 -82296965 + L1Md_T LINE L1 5590 6585 0 2 746 297 0 0 0 chr15 21198227 21198260 -82296714 + (A)n Simple_repeat Simple_repeat 1 33 0 2 746 800 310 53 11 chr15 21198317 21198601 -82296373 + MTD LTR MaLR 124 419 0 2 746 780 285 102 109 chr15 21198763 21198907 -82296067 + MTD-int LTR MaLR 655 824 -434 2 746 353 22 22 0 chr15 21198907 21198953 -82296021 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 2 746 780 285 102 109 chr15 21198953 21199415 -82295559 + MTD-int LTR MaLR 825 1257 -1 2 746 182 128 0 25 chr15 21199451 21199491 -82295483 + T-rich Low_complexity Low_complexity 2 40 0 2 746 887 253 68 93 chr15 21199499 21199693 -82295281 + MTD LTR MaLR 3 201 -218 2 746 186 43 0 0 chr15 21199693 21199716 -82295258 + (CAA)n Simple_repeat Simple_repeat 1 23 0 2 746 887 253 68 93 chr15 21199716 21199949 -82295025 + MTD LTR MaLR 202 419 0 2 746 2445 193 111 21 chr15 21200935 21201566 -82293408 + RMER6C LTR ERVK 3 690 0 2 746 1498 266 31 35 chr15 21202730 21203209 -82291765 - Lx6 LINE L1 -15 7445 6969 2 746 545 101 0 10 chr15 21203566 21203666 -82291308 + (GA)n Simple_repeat Simple_repeat 1 99 0 2 746 3931 42 0 2 chr15 21203807 21204290 -82290684 + L1Md_F3 LINE L1 6102 6583 -1 2 746 616 259 16 11 chr15 21204386 21204573 -82290401 - Lx6 LINE L1 -8 7452 7265 2 746 315 145 0 0 chr15 21204675 21204744 -82290230 + (TC)n Simple_repeat Simple_repeat 2 70 0 2 746 198 91 0 0 chr15 21204746 21204779 -82290195 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 746 520 60 108 0 chr15 21205300 21205383 -82289591 + L1Md_F2 LINE L1 6480 6571 -11 2 746 366 23 0 0 chr15 21205876 21205919 -82289055 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2 746 246 183 42 14 chr15 21206385 21206457 -82288517 + (TA)n Simple_repeat Simple_repeat 2 75 0 2 746 1629 37 42 0 chr15 21206474 21206688 -82288286 - L1Md_F3 LINE L1 -1 6583 6361 2 746 21 57 0 0 chr15 21207391 21207426 -82287548 + AT_rich Low_complexity Low_complexity 1 35 0 2 746 25 0 0 0 chr15 21208724 21208749 -82286225 + AT_rich Low_complexity Low_complexity 1 25 0 2 746 28 29 0 0 chr15 21209377 21209412 -82285562 + AT_rich Low_complexity Low_complexity 1 35 0 2 746 1635 190 6 60 chr15 21209489 21209842 -82285132 - Lx4A LINE L1 -1 7057 6724 2 746 424 290 87 0 chr15 21210334 21210472 -82284502 + B3 SINE B2 29 178 -38 2 746 543 123 297 14 chr15 21210672 21210820 -82284154 + B2_Mm2 SINE B2 3 192 -3 2 746 1171 105 60 11 chr15 21210832 21211015 -82283959 + B2_Mm2 SINE B2 2 193 -2 2 746 2384 129 74 9 chr15 21211076 21211497 -82283477 + Lx LINE L1 6201 6648 -6 2 746 2082 107 3 22 chr15 21211596 21211920 -82283054 + L1_Mus4 LINE L1 6319 6636 0 3 746 228 111 0 0 chr15 21212164 21212200 -82282774 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 3 746 641 174 98 0 chr15 21212205 21212337 -82282637 - B1_Mur3 SINE Alu 0 149 5 3 746 472 325 44 19 chr15 21213616 21213776 -82281198 + Tigger5 DNA MER2_type 25 188 -2218 3 746 315 243 101 18 chr15 21214041 21214150 -82280824 - Lx5 LINE L1 -3 7047 6930 3 746 29 28 0 0 chr15 21214924 21214960 -82280014 + AT_rich Low_complexity Low_complexity 1 36 0 3 746 263 376 102 11 chr15 21215347 21215632 -82279342 - MLT1A LTR MaLR -36 338 28 3 746 4661 136 16 16 chr15 21216175 21216961 -82278013 - Lx2 LINE L1 -427 6570 5785 3 746 22 0 0 0 chr15 21216979 21217001 -82277973 + AT_rich Low_complexity Low_complexity 1 22 0 3 746 2397 187 18 64 chr15 21217059 21217259 -82277715 - RLTR31A_Mm LTR ERVK 0 584 393 3 746 372 22 0 0 chr15 21217259 21217304 -82277670 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 746 2397 187 18 64 chr15 21217304 21217713 -82277261 - RLTR31A_Mm LTR ERVK -192 392 4 3 746 28 0 0 0 chr15 21218282 21218310 -82276664 + AT_rich Low_complexity Low_complexity 1 28 0 3 746 383 338 24 24 chr15 21218416 21218625 -82276349 - Lx9 LINE L1 -195 7449 7241 3 746 204 135 0 0 chr15 21220337 21220374 -82274600 + (T)n Simple_repeat Simple_repeat 1 37 0 3 746 751 294 78 46 chr15 21221104 21221628 -82273346 - L1_Rod LINE L1 -26 5821 5281 3 746 336 48 0 0 chr15 21222388 21222430 -82272544 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 746 504 32 0 0 chr15 21222458 21222520 -82272454 + (GA)n Simple_repeat Simple_repeat 1 62 0 3 746 270 273 21 39 chr15 21222591 21222698 -82272276 - PB1D9 SINE Alu -23 126 23 3 746 429 36 0 0 chr15 21222708 21222763 -82272211 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 3 746 1294 221 28 18 chr15 21222957 21223243 -82271731 + ORR1C2 LTR MaLR 1 289 -95 3 746 6410 61 88 24 chr15 21223245 21224206 -82270768 - L1Md_F2 LINE L1 -12 6570 5548 3 746 437 182 0 0 chr15 21224206 21224283 -82270691 + ORR1C2 LTR MaLR 278 354 -30 3 746 2074 136 3 6 chr15 21224389 21224715 -82270259 - ORR1A2 LTR MaLR -2 325 1 3 746 9708 173 42 14 chr15 21224715 21225626 -82269348 - ORR1A2-int LTR MaLR 0 1963 1030 3 746 234 0 0 0 chr15 21225626 21225652 -82269322 + (TCC)n Simple_repeat Simple_repeat 3 28 0 3 746 2177 154 80 0 chr15 21225652 21226041 -82268933 - Lx2 LINE L1 -3 6994 6575 3 746 9708 173 42 14 chr15 21226041 21226326 -82268648 - ORR1A2-int LTR MaLR -934 1029 734 3 746 1103 83 0 0 chr15 21226326 21226471 -82268503 + B1_Mus2 SINE Alu 3 147 0 3 746 9708 173 42 14 chr15 21226471 21227170 -82267804 - ORR1A2-int LTR MaLR -1230 733 16 3 746 2097 107 6 31 chr15 21227180 21227507 -82267467 - ORR1A2 LTR MaLR -8 319 1 3 746 359 285 0 65 chr15 21227553 21227692 -82267282 - BC1_Mm scRNA scRNA -20 132 3 3 746 21 36 0 0 chr15 21227874 21227902 -82267072 + AT_rich Low_complexity Low_complexity 1 28 0 3 746 285 98 0 0 chr15 21228727 21228768 -82266206 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 3 746 297 367 0 18 chr15 21229262 21229373 -82265601 + RSINE1 SINE B4 11 119 -46 3 746 372 22 0 0 chr15 21229398 21229443 -82265531 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 746 279 318 234 18 chr15 21229489 21229664 -82265310 - B3 SINE B2 0 216 4 3 746 557 263 43 49 chr15 21229716 21229900 -82265074 + B3A SINE B2 1 183 -15 3 746 542 295 63 68 chr15 21229943 21230128 -82264846 + B3 SINE B2 5 193 -23 3 746 480 35 0 0 chr15 21230128 21230186 -82264788 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 746 542 295 63 68 chr15 21230186 21230207 -82264767 + B3 SINE B2 194 210 -6 3 746 22 56 0 0 chr15 21230903 21230939 -82264035 + AT_rich Low_complexity Low_complexity 1 36 0 3 746 955 62 47 0 chr15 21231169 21231297 -82263677 + B1_Mm SINE Alu 3 136 -11 3 746 726 0 0 31 chr15 21231297 21231394 -82263580 + (TAAAA)n Simple_repeat Simple_repeat 2 95 0 3 746 330 169 0 0 chr15 21232369 21232434 -82262540 + T-rich Low_complexity Low_complexity 1 65 0 3 93 26591 118 114 50 chr15 21232438 21233676 -82261298 - L1_Mus2 LINE L1 0 6566 5234 3 747 387 0 0 0 chr15 21233676 21233719 -82261255 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 747 534 31 0 0 chr15 21233719 21233782 -82261192 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 747 26591 147 17 10 chr15 21233782 21238648 -82256326 - L1_Mus2 LINE L1 -650 5233 361 3 747 2894 40 0 6 chr15 21240475 21240823 -82254151 - ORR1A0 LTR MaLR 0 346 1 3 747 870 184 220 27 chr15 21241440 21241533 -82253441 - RMER6D LTR ERVK -3 717 589 3 747 2914 87 7 15 chr15 21241533 21241943 -82253031 - MTB_Mm LTR MaLR 0 407 1 3 747 870 184 220 27 chr15 21241943 21242072 -82252902 - RMER6D LTR ERVK -132 588 452 3 747 575 234 206 41 chr15 21242064 21242450 -82252524 - RMER20B LTR ERVK -193 434 1 3 747 256 258 261 40 chr15 21242450 21242660 -82252314 - RMER6D LTR ERVK -231 489 230 3 747 207 0 0 0 chr15 21242678 21242701 -82252273 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 3 747 1111 137 0 0 chr15 21242706 21242867 -82252107 - B2_Mm2 SINE B2 -34 161 1 3 747 1032 180 90 5 chr15 21242867 21243074 -82251900 - RMER6D LTR ERVK -495 225 1 3 747 283 194 129 0 chr15 21243731 21243824 -82251150 - L1MA8 LINE L1 -5 6286 6182 3 747 2580 81 65 0 chr15 21244860 21245231 -82249743 - L1_Mus3 LINE L1 0 6638 6244 3 747 30 83 0 0 chr15 21245793 21245865 -82249109 + AT_rich Low_complexity Low_complexity 1 72 0 3 747 516 188 68 49 chr15 21245920 21246082 -82248892 - Lx9 LINE L1 -3 7641 7477 3 747 263 230 0 33 chr15 21246121 21246211 -82248763 - Lx9 LINE L1 -133 7511 7425 3 747 4898 180 62 16 chr15 21246461 21247163 -82247811 + Lx2B LINE L1 5186 5917 -1083 3 747 185 0 40 0 chr15 21247163 21247188 -82247786 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 3 747 4898 211 87 31 chr15 21247188 21247936 -82247038 + Lx2B LINE L1 5918 6715 -285 3 747 3129 34 39 3 chr15 21247936 21248318 -82246656 + MTA_Mm LTR MaLR 1 396 0 3 747 7404 86 40 8 chr15 21248318 21249382 -82245592 + MTA_Mm-int LTR MaLR 1 1098 0 3 747 3202 28 21 0 chr15 21249382 21249770 -82245204 + MTA_Mm LTR MaLR 1 396 0 3 747 4898 238 119 33 chr15 21249770 21250017 -82244957 + Lx2B LINE L1 6369 6858 -142 3 747 6735 118 38 0 chr15 21250037 21250971 -82244003 - Lx3_Mus LINE L1 0 7009 6051 3 747 219 36 0 0 chr15 21250971 21250999 -82243975 + (TCCC)n Simple_repeat Simple_repeat 1 28 0 3 747 6735 118 38 0 chr15 21250999 21251113 -82243861 - Lx3_Mus LINE L1 -959 6050 5922 3 747 279 0 0 0 chr15 21251116 21251147 -82243827 + (TTCTC)n Simple_repeat Simple_repeat 2 32 0 3 747 2239 90 45 41 chr15 21251147 21251638 -82243336 - Lx3_Mus LINE L1 -854 6143 5617 3 747 2419 82 3 3 chr15 21251637 21251978 -82242996 + L1_Mur1 LINE L1 3723 4063 -1823 3 747 1699 178 27 7 chr15 21252029 21252431 -82242543 - Lx2 LINE L1 -156 6841 6211 3 747 428 250 97 88 chr15 21252509 21252838 -82242136 + L1MA4A LINE L1 5674 6005 -295 3 747 24 53 0 0 chr15 21254675 21254713 -82240261 + AT_rich Low_complexity Low_complexity 1 38 0 3 747 412 18 35 0 chr15 21254773 21254830 -82240144 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 747 405 0 0 0 chr15 21254830 21254875 -82240099 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 747 220 286 30 90 chr15 21254875 21254975 -82239999 + PB1D10 SINE Alu 23 116 -1 3 747 472 200 29 0 chr15 21256268 21256443 -82238531 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 747 234 245 39 0 chr15 21256465 21256567 -82238407 + (TA)n Simple_repeat Simple_repeat 1 106 0 3 747 22 0 0 0 chr15 21257837 21257859 -82237115 + AT_rich Low_complexity Low_complexity 1 22 0 3 747 2951 70 42 0 chr15 21258487 21258871 -82236103 + MTB LTR MaLR 1 400 0 3 747 1278 284 78 43 chr15 21259141 21259513 -82235461 - Lx6 LINE L1 0 7460 7083 3 747 1635 182 34 29 chr15 21259513 21259921 -82235053 - RMER17C LTR ERVK 0 410 1 3 747 1278 284 78 43 chr15 21259921 21260038 -82234936 - Lx6 LINE L1 -378 7082 6954 3 747 22 35 0 0 chr15 21260787 21260816 -82234158 + AT_rich Low_complexity Low_complexity 1 29 0 3 747 26 30 0 0 chr15 21261259 21261292 -82233682 + AT_rich Low_complexity Low_complexity 1 33 0 3 747 439 373 22 6 chr15 21261442 21261620 -82233354 + MIR3 SINE MIR 21 201 -7 3 747 645 311 25 20 chr15 21261706 21261903 -82233071 - B3 SINE B2 -14 202 5 3 747 2989 166 46 66 chr15 21263830 21264590 -82230384 + RMER17A LTR ERVK 1 745 -6 3 747 213 39 0 0 chr15 21264590 21264616 -82230358 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 747 435 19 0 0 chr15 21264626 21264678 -82230296 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 747 319 209 0 107 chr15 21264679 21264754 -82230220 - B2_Mm2 SINE B2 -127 68 2 3 747 1011 234 75 4 chr15 21265200 21265427 -82229547 - Lx6 LINE L1 -5 7455 7213 3 747 287 87 0 21 chr15 21265427 21265474 -82229500 + B1_Mur4 SINE Alu 104 149 -1 3 747 397 166 5 0 chr15 21265476 21265555 -82229419 - Lx7 LINE L1 -217 7479 7415 3 747 585 259 47 20 chr15 21265557 21265707 -82229267 - MTC-int LTR MaLR -713 545 392 3 747 37851 30 0 1 chr15 21265862 21272329 -82222645 - L1Md_T LINE L1 0 6585 26 3 747 279 370 25 25 chr15 21274621 21274779 -82220195 + MIR SINE MIR 51 208 -54 3 747 363 293 19 39 chr15 21275364 21275467 -82219507 + B3 SINE B2 6 106 -110 3 747 274 247 129 47 chr15 21275502 21275587 -82219387 + B3 SINE B2 89 180 -36 3 747 368 279 12 0 chr15 21276190 21276276 -82218698 + B3 SINE B2 1 87 -129 3 747 567 43 0 0 chr15 21277119 21277189 -82217785 + (GGAA)n Simple_repeat Simple_repeat 2 71 0 3 747 472 291 20 33 chr15 21277305 21277458 -82217516 + RSINE1 SINE B4 15 165 0 3 747 374 233 8 0 chr15 21277458 21277591 -82217383 + (CA)n Simple_repeat Simple_repeat 1 134 0 3 747 23 0 0 0 chr15 21277871 21277894 -82217080 + AT_rich Low_complexity Low_complexity 1 23 0 3 747 22 35 0 0 chr15 21277911 21277940 -82217034 + AT_rich Low_complexity Low_complexity 1 29 0 3 747 1094 95 0 0 chr15 21278227 21278374 -82216600 + B1_Mus2 SINE Alu 1 147 0 3 747 285 51 0 0 chr15 21279087 21279126 -82215848 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 747 21 36 0 0 chr15 21280441 21280469 -82214505 + AT_rich Low_complexity Low_complexity 1 28 0 3 747 667 200 122 161 chr15 21281453 21281515 -82213459 - ORR1D1 LTR MaLR -28 301 270 3 747 5621 106 19 21 chr15 21281515 21282399 -82212575 - Lx3B LINE L1 -5 6968 6087 3 747 815 252 143 18 chr15 21282399 21282678 -82212296 - ORR1D1 LTR MaLR -58 316 3 3 747 4210 275 47 29 chr15 21282690 21284022 -82210952 - ORR1D1-int LTR MaLR -10 1360 5 3 747 329 160 22 4 chr15 21284026 21284098 -82210876 - ORR1D1 LTR MaLR 0 384 271 3 747 23 68 0 0 chr15 21284158 21284202 -82210772 + AT_rich Low_complexity Low_complexity 1 44 0 3 747 504 149 0 0 chr15 21284685 21284779 -82210195 + (CA)n Simple_repeat Simple_repeat 2 95 0 3 747 187 236 14 14 chr15 21285950 21286023 -82208951 + (TATG)n Simple_repeat Simple_repeat 3 75 0 4 747 717 236 0 0 chr15 21286026 21286166 -82208808 - B1_Mur4 SINE Alu -9 141 2 4 747 585 288 0 14 chr15 21286397 21286538 -82208436 + B1_Mur1 SINE Alu 10 148 -1 4 747 2649 285 25 4 chr15 21289162 21289856 -82205118 - Lx5 LINE L1 -7 7043 6336 4 747 682 160 8 0 chr15 21289893 21290012 -82204962 - Lx5 LINE L1 -1307 5743 5624 4 747 7273 193 19 29 chr15 21290006 21291184 -82203790 - Lx5 LINE L1 -422 5455 4286 4 747 828 118 0 0 chr15 21291184 21291311 -82203663 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 4 747 1011 62 31 0 chr15 21291312 21291442 -82203532 - B1_Mm SINE Alu -12 135 2 4 747 7273 193 19 29 chr15 21291442 21291894 -82203080 - Lx5 LINE L1 -1592 4285 3839 4 747 4885 118 5 8 chr15 21291894 21292638 -82202336 - L1_Mus4 LINE L1 -3 6633 5892 4 747 3007 149 19 0 chr15 21292638 21293121 -82201853 + L1_Mus4 LINE L1 5378 5869 -14 4 747 5313 176 17 35 chr15 21293130 21293927 -82201047 - Lx5 LINE L1 -2033 3844 3057 4 747 225 0 0 0 chr15 21293927 21293952 -82201022 + (TTCC)n Simple_repeat Simple_repeat 1 25 0 4 747 303 28 0 0 chr15 21293954 21293990 -82200984 + (TTCCC)n Simple_repeat Simple_repeat 2 37 0 4 747 5313 176 17 35 chr15 21293990 21294006 -82200968 - Lx5 LINE L1 -2821 3056 3048 4 747 1069 106 6 11 chr15 21294006 21294187 -82200787 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 747 5313 176 17 35 chr15 21294187 21294579 -82200395 - Lx5 LINE L1 -2830 3047 2657 4 747 380 185 37 0 chr15 21294577 21294658 -82200316 - Lx5 LINE L1 -4094 1783 1700 4 747 499 305 174 13 chr15 21294940 21295176 -82199798 + MTD LTR MaLR 134 407 -12 4 747 2882 289 72 42 chr15 21295187 21295954 -82199020 + MTD-int LTR MaLR 1 770 -488 4 747 5236 86 126 16 chr15 21295954 21296767 -82198207 + RLTR13D6 LTR ERVK 1 902 0 4 747 2882 289 72 42 chr15 21296767 21297102 -82197872 + MTD-int LTR MaLR 771 1136 -122 4 747 435 92 0 0 chr15 21297104 21297169 -82197805 + (TA)n Simple_repeat Simple_repeat 1 65 0 4 747 1568 178 57 82 chr15 21297350 21297475 -82197499 - Lx5 LINE L1 -4246 1631 1538 4 747 2558 121 28 5 chr15 21297475 21297875 -82197099 - Lx3A LINE L1 -1 6980 6572 4 747 1568 184 50 40 chr15 21297875 21298388 -82196586 - Lx5 LINE L1 -4340 1537 980 4 747 276 231 101 100 chr15 21298827 21299016 -82195958 - RMER16 LTR ERVK -164 369 1 4 747 30 69 0 0 chr15 21300682 21300740 -82194234 + AT_rich Low_complexity Low_complexity 1 58 0 4 747 896 340 48 39 chr15 21301148 21301631 -82193343 - Lx7 LINE L1 -417 7279 6793 4 747 245 367 105 66 chr15 21302204 21302461 -82192513 - B4 SINE B4 -20 272 6 4 747 6139 164 40 15 chr15 21302482 21303649 -82191325 + RMER12B LTR ERVK 1 1197 -207 4 747 735 71 0 0 chr15 21303649 21303747 -82191227 + (TA)n Simple_repeat Simple_repeat 2 99 0 4 747 549 199 95 0 chr15 21303747 21303884 -82191090 + RMER12B LTR ERVK 1285 1471 -101 4 747 204 40 0 0 chr15 21304347 21304372 -82190602 + (CAA)n Simple_repeat Simple_repeat 2 26 0 4 747 468 0 0 0 chr15 21304846 21304898 -82190076 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 747 360 325 87 0 chr15 21306538 21306664 -82188310 + MER58A DNA MER1_type 71 207 -17 4 747 424 372 12 68 chr15 21307404 21307652 -82187322 - B4 SINE B4 -56 236 3 4 747 5968 65 0 7 chr15 21307875 21308649 -82186325 + L1Md_F2 LINE L1 5802 6570 -12 4 747 22 0 0 0 chr15 21309048 21309070 -82185904 + AT_rich Low_complexity Low_complexity 1 22 0 4 747 828 0 0 0 chr15 21309096 21309188 -82185786 + (TTTC)n Simple_repeat Simple_repeat 4 95 0 4 747 1115 66 0 0 chr15 21309188 21309324 -82185650 - B1_Mus1 SINE Alu -12 136 1 4 747 23 0 0 0 chr15 21309766 21309789 -82185185 + AT_rich Low_complexity Low_complexity 1 23 0 4 747 282 116 0 0 chr15 21310562 21310605 -82184369 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 4 747 216 0 0 0 chr15 21310796 21310820 -82184154 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 747 400 285 34 14 chr15 21310945 21311091 -82183883 + L1MDa LINE L1 1839 1987 -4646 4 747 275 289 0 32 chr15 21311370 21311463 -82183511 + (TATATG)n Simple_repeat Simple_repeat 5 94 0 4 747 390 331 72 31 chr15 21311464 21311657 -82183317 - B3 SINE B2 -14 202 2 4 747 2575 123 46 24 chr15 21311931 21312389 -82182585 - Lx LINE L1 -4 6650 6183 4 747 369 0 0 0 chr15 21312460 21312501 -82182473 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 747 228 132 29 29 chr15 21312501 21312560 -82182414 + A-rich Low_complexity Low_complexity 13 72 0 4 747 470 317 67 144 chr15 21312898 21313244 -82181730 + MTE2a LTR MaLR 3 320 -59 4 747 809 229 151 5 chr15 21313244 21313463 -82181511 + MTD LTR MaLR 1 251 -168 4 747 22 35 0 0 chr15 21316064 21316093 -82178881 + AT_rich Low_complexity Low_complexity 1 29 0 4 747 7166 81 23 4 chr15 21316154 21317787 -82177187 - L1_Mus1 LINE L1 0 6567 4903 4 747 390 91 0 0 chr15 21318545 21318600 -82176374 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 747 461 58 14 0 chr15 21319496 21319565 -82175409 + (GAAA)n Simple_repeat Simple_repeat 4 73 0 4 747 215 125 0 0 chr15 21319570 21319602 -82175372 + (GA)n Simple_repeat Simple_repeat 2 33 0 4 747 1856 203 45 0 chr15 21319723 21320097 -82174877 + ORR1B1 LTR MaLR 1 391 -3 4 747 1896 120 170 31 chr15 21321185 21321538 -82173436 - RLTR44A LTR ERVK 0 405 4 4 747 980 291 105 24 chr15 21325545 21325879 -82169095 - MTE2a LTR MaLR 0 379 19 4 747 369 0 0 0 chr15 21326188 21326229 -82168745 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 4 747 23 0 0 0 chr15 21327352 21327375 -82167599 + AT_rich Low_complexity Low_complexity 1 23 0 4 747 708 98 0 0 chr15 21327495 21327597 -82167377 + (CA)n Simple_repeat Simple_repeat 1 102 0 4 747 1125 111 17 23 chr15 21327872 21328047 -82166927 - B2_Mm2 SINE B2 -9 186 13 4 747 32 67 0 0 chr15 21328840 21328900 -82166074 + AT_rich Low_complexity Low_complexity 1 60 0 4 747 24 32 0 0 chr15 21329655 21329686 -82165288 + AT_rich Low_complexity Low_complexity 1 31 0 4 747 432 328 50 0 chr15 21331355 21331553 -82163421 - B3 SINE B2 -8 208 1 4 747 207 205 38 13 chr15 21331567 21331646 -82163328 + (TAA)n Simple_repeat Simple_repeat 2 82 0 4 747 1883 85 15 4 chr15 21331660 21331932 -82163042 - L1Md_F2 LINE L1 0 6582 6308 4 747 2587 24 0 0 chr15 21331932 21332227 -82162747 + L1Md_F2 LINE L1 5596 5890 -692 4 747 25 31 0 0 chr15 21332230 21332262 -82162712 + AT_rich Low_complexity Low_complexity 1 32 0 4 747 207 200 20 0 chr15 21332500 21332550 -82162424 + CT-rich Low_complexity Low_complexity 2 52 0 4 747 495 0 0 0 chr15 21332850 21332905 -82162069 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 747 253 86 0 0 chr15 21332944 21332979 -82161995 - PB1D9 SINE Alu -83 37 3 4 747 2715 96 5 33 chr15 21333251 21333671 -82161303 + L1_Mus3 LINE L1 6224 6631 -7 4 747 207 0 0 0 chr15 21333859 21333882 -82161092 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 747 878 85 62 8 chr15 21333882 21334012 -82160962 - B1_Mus2 SINE Alu -10 137 1 4 747 414 0 0 0 chr15 21334780 21334826 -82160148 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 747 194 62 31 0 chr15 21335398 21335430 -82159544 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 4 747 840 245 26 26 chr15 21335451 21335677 -82159297 - Lx5 LINE L1 -73 7387 7162 4 747 543 261 16 60 chr15 21335715 21335894 -82159080 - Lx5 LINE L1 -393 6657 6506 4 747 1893 271 82 19 chr15 21335906 21336501 -82158473 - Lx5 LINE L1 -695 6355 5723 4 747 201 222 32 0 chr15 21336860 21336923 -82158051 + A-rich Low_complexity Low_complexity 5 69 0 4 747 271 282 17 0 chr15 21337306 21337423 -82157551 + (TG)n Simple_repeat Simple_repeat 2 120 0 4 747 262 0 26 26 chr15 21337555 21337594 -82157380 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 4 747 398 349 32 54 chr15 21337832 21337861 -82157113 + B3A SINE B2 1 29 -169 4 747 7913 39 0 1 chr15 21337861 21338809 -82156165 + L1Md_F2 LINE L1 5635 6581 -1 4 747 398 333 40 84 chr15 21338809 21339005 -82155969 + B3A SINE B2 30 216 0 4 747 27 29 0 0 chr15 21339224 21339258 -82155716 + AT_rich Low_complexity Low_complexity 1 34 0 4 747 3934 122 7 3 chr15 21339259 21339865 -82155109 - Lx3A LINE L1 -12 6969 6362 4 747 2801 99 0 10 chr15 21340667 21341073 -82153901 + L1Md_F2 LINE L1 6180 6581 -1 4 747 1078 288 28 44 chr15 21342470 21342928 -82152046 - RCHARR1 DNA MER1_type -4 970 520 4 747 864 293 35 4 chr15 21342930 21343190 -82151784 - Lx6 LINE L1 -843 6617 6350 4 747 997 340 53 29 chr15 21343234 21343923 -82151051 + Lx8 LINE L1 6340 7053 -643 4 747 1663 161 94 71 chr15 21343923 21344314 -82150660 + RMER6C LTR ERVK 1 401 -355 4 747 519 184 125 23 chr15 21344294 21344422 -82150552 + RMER6C LTR ERVK 580 720 0 4 747 324 316 57 29 chr15 21344473 21344613 -82150361 + Lx8 LINE L1 7095 7238 -235 4 747 189 0 0 0 chr15 21344613 21344634 -82150340 + (T)n Simple_repeat Simple_repeat 1 21 0 4 747 30 0 0 0 chr15 21345118 21345148 -82149826 + AT_rich Low_complexity Low_complexity 1 30 0 4 747 432 0 0 0 chr15 21345359 21345407 -82149567 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 747 361 328 82 27 chr15 21345965 21346222 -82148752 - MLT2C1 LTR ERVL -126 271 1 4 747 1144 76 0 0 chr15 21346840 21346985 -82147989 - B1_Mm SINE Alu -2 145 1 4 747 263 262 88 31 chr15 21347770 21347959 -82147015 - L1MA7 LINE L1 -350 5962 5752 4 747 603 117 0 0 chr15 21350250 21350344 -82144630 + (GGGA)n Simple_repeat Simple_repeat 4 97 0 4 747 639 26 0 0 chr15 21351225 21351302 -82143672 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 747 459 0 0 0 chr15 21351302 21351352 -82143622 + (GA)n Simple_repeat Simple_repeat 2 52 0 4 747 186 275 0 0 chr15 21351563 21351643 -82143331 + (TG)n Simple_repeat Simple_repeat 1 80 0 4 747 312 335 0 62 chr15 21351643 21351837 -82143137 - B3A SINE B2 -16 182 1 4 747 338 360 61 18 chr15 21352172 21352336 -82142638 - MT2A LTR ERVL -301 232 62 4 747 254 342 17 34 chr15 21352322 21352440 -82142534 - MTE2b LTR MaLR -261 118 3 4 747 1999 13 0 0 chr15 21352693 21352924 -82142050 - L1Md_T LINE L1 -1576 4307 4077 4 747 10876 27 0 0 chr15 21352923 21354204 -82140770 + L1Md_T LINE L1 4305 5585 -298 4 747 8133 49 0 0 chr15 21354205 21355201 -82139773 + L1Md_T LINE L1 5587 6582 0 4 747 804 11 0 0 chr15 21355494 21355587 -82139387 + (CA)n Simple_repeat Simple_repeat 2 94 0 4 747 309 304 2 167 chr15 21357693 21357846 -82137128 + MTE2b LTR MaLR 190 317 -62 4 747 725 320 65 60 chr15 21357852 21357965 -82137009 - Lx8 LINE L1 -427 7046 6922 4 747 3614 125 42 16 chr15 21357965 21358542 -82136432 + Lx LINE L1 6063 6654 0 4 747 725 320 65 60 chr15 21358542 21358907 -82136067 - Lx8 LINE L1 -552 6921 6566 4 747 751 337 48 42 chr15 21358930 21359599 -82135375 - L1M2 LINE L1 -1058 5085 4413 4 747 217 273 13 0 chr15 21359641 21359718 -82135256 + (CA)n Simple_repeat Simple_repeat 1 78 0 4 747 204 167 0 23 chr15 21359949 21359992 -82134982 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 4 747 403 162 26 18 chr15 21360010 21360123 -82134851 - L1Md_A LINE L1 0 6582 6469 5 747 420 140 0 0 chr15 21360146 21360239 -82134735 + (TG)n Simple_repeat Simple_repeat 2 94 0 5 747 224 228 0 0 chr15 21361206 21361263 -82133711 + (TA)n Simple_repeat Simple_repeat 1 57 0 5 747 1175 233 49 116 chr15 21361771 21362160 -82132814 + ORR1C2 LTR MaLR 2 364 -20 5 747 2414 204 45 19 chr15 21362861 21363395 -82131579 + Lx2B LINE L1 6387 6934 -66 5 747 389 214 40 46 chr15 21363375 21363527 -82131447 + Lx2B LINE L1 6833 6983 -17 5 747 212 158 0 26 chr15 21364332 21364371 -82130603 + B1F2 SINE Alu 22 59 -90 5 747 266 239 0 0 chr15 21364390 21364461 -82130513 + Lx7 LINE L1 6148 6218 -1478 5 93 1642 235 68 72 chr15 21364503 21365030 -82129944 - RLTR31A_Mm LTR ERVK -55 529 5 5 748 1630 260 93 15 chr15 21365051 21365214 -82129760 + Lx7 LINE L1 6242 6424 -1272 5 748 266 50 25 0 chr15 21365214 21365254 -82129720 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 748 1630 260 93 15 chr15 21365254 21365551 -82129423 + Lx7 LINE L1 6425 6738 -958 5 748 255 274 78 26 chr15 21365754 21365870 -82129104 - RMER3D-int LTR ERVK -2545 297 176 5 748 1933 195 36 15 chr15 21366064 21366455 -82128519 - RLTR20A LTR ERVK 0 541 143 5 748 30 93 0 0 chr15 21366556 21366642 -82128332 + AT_rich Low_complexity Low_complexity 1 86 0 5 748 25 65 0 0 chr15 21366948 21366994 -82127980 + AT_rich Low_complexity Low_complexity 1 46 0 5 748 249 275 48 48 chr15 21367059 21367143 -82127831 + B2_Mm1t SINE B2 1 84 -109 5 748 26 74 0 0 chr15 21371207 21371261 -82123713 + AT_rich Low_complexity Low_complexity 1 54 0 5 748 297 369 36 8 chr15 21371495 21371738 -82123236 - Lx9 LINE L1 -1072 6572 6177 5 748 618 14 0 0 chr15 21371826 21371897 -82123077 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 5 748 525 80 0 0 chr15 21371898 21371973 -82123001 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 748 239 319 21 11 chr15 21372232 21372327 -82122647 - Lx9 LINE L1 -480 7164 7069 5 748 1735 261 53 20 chr15 21372361 21372951 -82122023 + Lx8 LINE L1 5269 5919 -1554 5 748 40635 16 0 6 chr15 21373374 21379811 -82115163 + L1Md_A LINE L1 1 6394 -188 5 748 27337 30 0 0 chr15 21379810 21383079 -82111895 + L1Md_T LINE L1 2318 5586 -297 5 748 8958 7 0 0 chr15 21383079 21384075 -82110899 + L1Md_T LINE L1 5587 6582 0 5 748 1720 5 5 0 chr15 21384079 21384280 -82110694 + L1Md_A LINE L1 6381 6582 0 5 748 26 30 0 0 chr15 21384290 21384323 -82110651 + AT_rich Low_complexity Low_complexity 1 33 0 5 748 456 19 0 0 chr15 21384609 21384662 -82110312 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 748 323 233 40 60 chr15 21384662 21384863 -82110111 - RMER17D LTR ERVK -447 442 246 5 748 584 299 117 75 chr15 21386089 21386396 -82108578 + ORR1E LTR MaLR 2 321 -57 5 748 281 26 26 0 chr15 21386575 21386613 -82108361 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 748 251 295 0 0 chr15 21386615 21386676 -82108298 - B4A SINE B4 -230 62 2 5 748 234 294 22 0 chr15 21387252 21387344 -82107630 + Lx9 LINE L1 7242 7335 -309 5 748 863 248 61 36 chr15 21387363 21387583 -82107391 - Lx7 LINE L1 -1 7695 7459 5 748 483 33 0 0 chr15 21387583 21387644 -82107330 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 748 863 248 61 36 chr15 21387644 21387753 -82107221 - Lx7 LINE L1 -238 7458 7359 5 748 220 236 11 11 chr15 21387753 21387843 -82107131 + GA-rich Low_complexity Low_complexity 1 90 0 5 748 1861 247 51 41 chr15 21387855 21388441 -82106533 - Lx7 LINE L1 -329 7367 6776 5 748 495 0 0 0 chr15 21388511 21388566 -82106408 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 748 680 343 21 18 chr15 21391165 21391495 -82103479 + Lx9 LINE L1 7091 7421 -223 5 748 2851 46 3 0 chr15 21391786 21392131 -82102843 - ORR1A0 LTR MaLR 0 346 1 5 748 1541 161 15 4 chr15 21392215 21392477 -82102497 - Lx2 LINE L1 -578 6419 6155 5 748 3096 169 14 5 chr15 21392479 21393055 -82101919 + Lx2 LINE L1 6416 6996 -1 5 748 7998 199 18 25 chr15 21393128 21395205 -82099769 - Lx4B LINE L1 -762 6296 4217 5 748 32372 110 35 15 chr15 21395205 21396782 -82098192 + L1Md_F2 LINE L1 382 1975 -3908 5 748 180 0 0 0 chr15 21396782 21396802 -82098172 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 748 32372 87 12 7 chr15 21396802 21400735 -82094239 + L1Md_F2 LINE L1 1976 5946 -636 5 748 380 245 32 0 chr15 21400812 21400906 -82094068 + L1MA8 LINE L1 6007 6103 -188 5 748 385 237 49 49 chr15 21401329 21401431 -82093543 + B1_Mur1 SINE Alu 34 135 -14 5 748 414 0 0 0 chr15 21401453 21401499 -82093475 + (GA)n Simple_repeat Simple_repeat 2 47 0 5 748 662 35 12 0 chr15 21401499 21401584 -82093390 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 5 748 38108 26 11 17 chr15 21401822 21403468 -82091506 - L1Md_A LINE L1 -2 6580 4929 5 748 226 183 46 77 chr15 21403468 21403533 -82091441 + RMER20A LTR ERVK 186 248 -268 5 748 38108 26 11 17 chr15 21403533 21407978 -82086996 - L1Md_A LINE L1 -2 4928 466 5 748 22 35 0 0 chr15 21407989 21408018 -82086956 + AT_rich Low_complexity Low_complexity 1 29 0 5 748 222 232 31 31 chr15 21408092 21408190 -82086784 + (TATATG)n Simple_repeat Simple_repeat 4 101 0 5 748 537 340 60 29 chr15 21408967 21409564 -82085410 - L1MA7 LINE L1 -8 6283 5668 5 748 622 69 0 0 chr15 21410195 21410282 -82084692 + L1_Mus2 LINE L1 6476 6562 -4 5 748 603 40 0 0 chr15 21410755 21410829 -82084145 + (TTCTC)n Simple_repeat Simple_repeat 2 75 0 5 748 1156 75 0 0 chr15 21410893 21411040 -82083934 - B1_Mm SINE Alu 0 147 1 5 748 2329 173 96 37 chr15 21411058 21411549 -82083425 - Lx3A LINE L1 -12 6969 6450 5 748 26 50 0 0 chr15 21411898 21411938 -82083036 + AT_rich Low_complexity Low_complexity 1 40 0 5 748 713 279 161 0 chr15 21412026 21412373 -82082601 - Lx9 LINE L1 -2 7642 7240 5 748 452 18 18 0 chr15 21412533 21412590 -82082384 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 748 257 250 14 14 chr15 21412598 21412667 -82082307 + CT-rich Low_complexity Low_complexity 2 70 0 5 748 239 0 32 0 chr15 21413158 21413189 -82081785 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 748 463 353 7 35 chr15 21413205 21413346 -82081628 - RSINE1 SINE B4 -25 140 4 5 748 13661 21 0 0 chr15 21414855 21416443 -82078531 + L1Md_A LINE L1 3999 5586 -297 5 748 8410 34 0 0 chr15 21416443 21417437 -82077537 + L1Md_A LINE L1 5587 6580 -2 5 748 201 39 0 0 chr15 21417447 21417473 -82077501 + (TAAAA)n Simple_repeat Simple_repeat 1 26 0 5 748 491 308 98 17 chr15 21417723 21417919 -82077055 - MTE2a LTR MaLR 0 419 167 5 748 268 271 60 30 chr15 21418219 21418352 -82076622 - L1MB4 LINE L1 0 6180 6044 5 748 397 170 175 29 chr15 21418391 21418494 -82076480 + PB1D9 SINE Alu 3 120 0 5 748 25 0 0 0 chr15 21418504 21418529 -82076445 + AT_rich Low_complexity Low_complexity 1 25 0 5 748 842 0 10 0 chr15 21419207 21419305 -82075669 + (TTTTC)n Simple_repeat Simple_repeat 4 102 0 5 748 1088 106 6 0 chr15 21419319 21419498 -82075476 + (TCCTG)n Simple_repeat Simple_repeat 1 180 0 5 748 307 296 58 53 chr15 21419498 21419705 -82075269 - L1MEe LINE L1 -4037 817 610 5 748 243 0 0 0 chr15 21420242 21420269 -82074705 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 748 218 401 61 52 chr15 21420273 21420486 -82074488 - B4A SINE B4 -77 215 1 5 748 244 297 14 0 chr15 21420687 21420761 -82074213 + CT-rich Low_complexity Low_complexity 3 77 0 5 748 521 216 20 48 chr15 21422539 21422685 -82072289 - Lx7 LINE L1 -16 7680 7539 5 748 24 32 0 0 chr15 21422710 21422741 -82072233 + AT_rich Low_complexity Low_complexity 1 31 0 5 748 28 29 0 0 chr15 21423755 21423790 -82071184 + AT_rich Low_complexity Low_complexity 1 35 0 5 748 21 82 0 0 chr15 21424036 21424085 -82070889 + AT_rich Low_complexity Low_complexity 1 49 0 5 748 6316 216 40 19 chr15 21424324 21424432 -82070542 - Lx5 LINE L1 0 7050 6931 5 748 282 56 0 0 chr15 21424432 21424468 -82070506 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 5 748 6316 216 40 19 chr15 21424468 21425743 -82069231 - Lx5 LINE L1 -120 6930 5639 5 748 4830 200 12 57 chr15 21425758 21426962 -82068012 + Lx5 LINE L1 4474 5624 -253 5 748 1416 295 55 31 chr15 21426964 21427545 -82067429 - Lx9 LINE L1 -467 7177 6583 5 748 254 115 19 0 chr15 21427562 21427614 -82067360 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 748 287 349 46 11 chr15 21427617 21427766 -82067208 + Lx9 LINE L1 6226 6480 -1164 5 748 678 306 73 22 chr15 21427814 21427883 -82067091 - Lx6 LINE L1 -26 7434 7366 5 748 1002 17 0 0 chr15 21427883 21427999 -82066975 + (CA)n Simple_repeat Simple_repeat 1 116 0 5 748 678 306 73 22 chr15 21427999 21428243 -82066731 - Lx6 LINE L1 -95 7365 7105 5 748 1228 103 54 0 chr15 21428258 21428443 -82066531 - B2_Mm2 SINE B2 0 195 1 5 748 6042 47 0 5 chr15 21428549 21429300 -82065674 - L1Md_F2 LINE L1 -1 6581 5835 5 748 1294 293 171 6 chr15 21429312 21429593 -82065381 - Lx6 LINE L1 -363 7097 6736 5 748 687 57 0 0 chr15 21429593 21429681 -82065293 + (TTTC)n Simple_repeat Simple_repeat 3 90 0 5 748 1294 297 157 6 chr15 21429681 21429917 -82065057 - Lx6 LINE L1 -725 6735 6281 5 748 309 316 34 68 chr15 21429953 21430062 -82064912 + Lx9 LINE L1 6498 6610 -1034 5 748 6142 71 0 8 chr15 21430062 21430881 -82064093 + L1Md_F2 LINE L1 5770 6581 -1 5 748 309 316 34 68 chr15 21430881 21430917 -82064057 + Lx9 LINE L1 6611 6638 -1006 5 748 378 51 1 4 chr15 21432705 21432771 -82062203 + B1_Mur4 SINE Alu 60 150 0 5 748 291 114 0 0 chr15 21432771 21432815 -82062159 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 5 748 232 253 0 40 chr15 21433019 21433118 -82061856 + (TA)n Simple_repeat Simple_repeat 2 96 0 5 748 922 62 8 8 chr15 21433902 21434033 -82060941 + (GAA)n Simple_repeat Simple_repeat 2 132 0 5 748 24 0 0 0 chr15 21434387 21434411 -82060563 + AT_rich Low_complexity Low_complexity 1 24 0 5 748 23 97 0 0 chr15 21435545 21435617 -82059357 + AT_rich Low_complexity Low_complexity 1 72 0 5 748 5722 143 16 16 chr15 21437217 21438156 -82056818 - Lx2B LINE L1 -10 6990 6052 5 748 6826 169 39 4 chr15 21438194 21439994 -82054980 + L1VL4 LINE L1 802 2666 -3220 5 748 3102 78 2 0 chr15 21439986 21440382 -82054592 - L1_Mus1 LINE L1 -187 6380 5984 5 748 1202 82 0 0 chr15 21440382 21440552 -82054422 + L1_Mus1 LINE L1 6397 6566 -1 5 748 978 163 24 38 chr15 21440559 21440739 -82054235 + MusHAL1 LINE L1 1442 1625 -1087 5 748 2981 74 13 3 chr15 21440739 21441131 -82053843 + MTA_Mm LTR MaLR 1 396 0 5 748 978 163 24 38 chr15 21441131 21441160 -82053814 + MusHAL1 LINE L1 1626 1648 -1064 5 748 1155 81 0 0 chr15 21443116 21443264 -82051710 + B1_Mus1 SINE Alu 1 148 0 5 748 22 35 0 0 chr15 21444086 21444115 -82050859 + AT_rich Low_complexity Low_complexity 1 29 0 5 748 369 285 89 60 chr15 21446560 21446728 -82048246 + RMER10A LTR ERVL 4 176 -266 5 748 265 297 27 0 chr15 21446728 21446802 -82048172 + C-rich Low_complexity Low_complexity 6 81 0 5 748 943 81 0 30 chr15 21446803 21446968 -82048006 + (TTCCC)n Simple_repeat Simple_repeat 4 163 0 6 748 258 274 232 21 chr15 21446991 21447185 -82047789 + RMER10A LTR ERVL 195 429 -13 5 748 937 140 40 28 chr15 21447367 21447543 -82047431 + B2_Mm2 SINE B2 1 178 -17 6 748 2483 31 0 0 chr15 21447546 21447839 -82047135 - L1Md_F2 LINE L1 -647 5935 5643 6 748 5056 67 3 6 chr15 21447840 21448505 -82046469 + L1Md_F2 LINE L1 5916 6578 -4 6 748 35 54 0 0 chr15 21448521 21448577 -82046397 + AT_rich Low_complexity Low_complexity 1 56 0 6 748 24 59 0 42 chr15 21449175 21449246 -82045728 + AT_rich Low_complexity Low_complexity 1 68 0 6 748 685 294 16 46 chr15 21450530 21450819 -82044155 + MTE-int LTR MaLR 55 356 -1224 6 748 430 296 54 14 chr15 21450910 21451078 -82043896 + MTE2a LTR MaLR 209 374 -5 6 748 709 322 27 10 chr15 21451177 21451469 -82043505 + MTE-int LTR MaLR 78 374 -1206 6 748 2510 69 18 0 chr15 21451549 21451920 -82043054 + L1_Mus4 LINE L1 5540 5916 -720 6 748 3026 48 50 0 chr15 21451922 21452299 -82042675 - MTA_Mm LTR MaLR 0 396 1 6 748 6954 81 39 71 chr15 21452299 21453434 -82041540 - MTA_Mm-int LTR MaLR 0 1098 1 6 748 1094 35 7 21 chr15 21453434 21453578 -82041396 - MTA_Mm LTR MaLR 0 396 255 6 748 764 80 8 66 chr15 21453540 21453661 -82041313 + MTA_Mm LTR MaLR 189 302 -94 6 748 281 328 0 0 chr15 21453711 21453833 -82041141 + (CA)n Simple_repeat Simple_repeat 2 123 0 6 748 257 275 42 90 chr15 21453867 21453936 -82041038 - Lx7 LINE L1 -285 7411 7355 6 748 444 19 0 0 chr15 21453936 21453989 -82040985 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 748 257 275 42 90 chr15 21453989 21454063 -82040911 - Lx7 LINE L1 -342 7354 7275 6 748 19329 88 6 5 chr15 21454062 21456096 -82038878 - L1Md_A LINE L1 -1865 4018 1982 6 748 189 0 0 0 chr15 21456096 21456117 -82038857 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 6 748 19329 102 5 4 chr15 21456117 21457259 -82037715 - L1Md_A LINE L1 -3902 1981 838 6 748 281 352 57 14 chr15 21457299 21457440 -82037534 + B4A SINE B4 56 202 -90 6 748 351 0 0 0 chr15 21457476 21457515 -82037459 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 748 24 32 0 0 chr15 21457672 21457703 -82037271 + AT_rich Low_complexity Low_complexity 1 31 0 6 748 528 368 59 5 chr15 21457888 21458074 -82036900 + 7SLRNA srpRNA srpRNA 1 196 -118 6 748 429 328 126 85 chr15 21458114 21458357 -82036617 + B4A SINE B4 6 263 -29 6 748 276 30 0 0 chr15 21458357 21458390 -82036584 + (TA)n Simple_repeat Simple_repeat 2 34 0 6 748 429 328 126 85 chr15 21458390 21458416 -82036558 + B4A SINE B4 264 286 -6 6 748 337 179 41 0 chr15 21458443 21458566 -82036408 + (TA)n Simple_repeat Simple_repeat 2 129 0 6 748 448 233 13 127 chr15 21458599 21458835 -82036139 - Lx9 LINE L1 -1 7643 7435 6 748 1159 216 23 23 chr15 21458875 21459136 -82035838 - ORR1C1 LTR MaLR -83 295 35 6 748 393 22 0 0 chr15 21459136 21459182 -82035792 + (TC)n Simple_repeat Simple_repeat 2 47 0 6 748 429 20 0 0 chr15 21459184 21459234 -82035740 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 748 272 97 65 0 chr15 21460080 21460142 -82034832 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 748 446 358 93 0 chr15 21460985 21461147 -82033827 + B3 SINE B2 6 182 -34 6 748 438 20 0 0 chr15 21461161 21461212 -82033762 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 748 225 0 0 0 chr15 21461934 21461959 -82033015 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 748 3305 97 34 4 chr15 21462349 21462845 -82032129 - Lx3_Mus LINE L1 -5 7004 6494 6 748 23 33 0 0 chr15 21462932 21462962 -82032012 + AT_rich Low_complexity Low_complexity 1 30 0 6 748 278 164 29 29 chr15 21463128 21463298 -82031676 + (TA)n Simple_repeat Simple_repeat 2 171 0 6 748 300 83 0 0 chr15 21464364 21464412 -82030562 + (A)n Simple_repeat Simple_repeat 1 48 0 6 748 32 0 0 0 chr15 21464606 21464638 -82030336 + AT_rich Low_complexity Low_complexity 1 32 0 6 748 252 300 20 20 chr15 21466264 21466366 -82028608 + PB1D10 SINE Alu 2 103 -14 6 748 243 0 0 0 chr15 21467962 21467989 -82026985 + (T)n Simple_repeat Simple_repeat 1 27 0 6 748 305 340 79 69 chr15 21468314 21468600 -82026374 - MLT1A LTR MaLR -61 313 12 6 748 584 382 37 20 chr15 21468618 21469027 -82025947 - MLT-int LTR MaLR -8 1727 1312 6 748 306 227 0 0 chr15 21469708 21469783 -82025191 + CT-rich Low_complexity Low_complexity 2 76 0 6 748 327 329 49 25 chr15 21469957 21470119 -82024855 - MLT-int LTR MaLR -1425 310 145 6 748 396 342 37 19 chr15 21470459 21470620 -82024354 + B3 SINE B2 3 166 -50 6 748 186 103 0 0 chr15 21470622 21470651 -82024323 + (A)n Simple_repeat Simple_repeat 1 29 0 6 748 300 380 87 62 chr15 21470879 21471120 -82023854 - B4A SINE B4 -45 247 1 6 748 23 0 0 0 chr15 21473007 21473030 -82021944 + AT_rich Low_complexity Low_complexity 1 23 0 6 748 517 318 25 5 chr15 21473158 21473357 -82021617 - B3 SINE B2 -10 206 4 6 748 333 0 0 0 chr15 21473504 21473541 -82021433 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 748 283 309 41 68 chr15 21473571 21473717 -82021257 - B1_Mur2 SINE Alu -7 142 1 6 748 448 203 42 0 chr15 21473739 21473857 -82021117 - Lx9 LINE L1 -2 7642 7520 6 748 333 0 0 0 chr15 21473859 21473896 -82021078 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 748 652 250 33 22 chr15 21473896 21474080 -82020894 - Lx9 LINE L1 -168 7476 7291 6 748 6711 119 27 3 chr15 21475606 21476693 -82018281 + Lx LINE L1 5532 6644 -10 6 748 1342 249 84 6 chr15 21476806 21477141 -82017833 - ORR1D2 LTR MaLR -9 361 1 6 748 21 0 0 0 chr15 21477204 21477225 -82017749 + AT_rich Low_complexity Low_complexity 1 21 0 6 748 22 35 0 0 chr15 21477408 21477437 -82017537 + AT_rich Low_complexity Low_complexity 1 29 0 6 748 414 119 298 0 chr15 21477528 21477612 -82017362 + Lx4A LINE L1 6947 7055 -3 6 748 808 212 89 13 chr15 21477907 21478132 -82016842 - Lx3C LINE L1 -3 6973 6732 6 748 2035 223 5 0 chr15 21478134 21478565 -82016409 - Lx3C LINE L1 -788 6188 5756 6 748 397 294 55 89 chr15 21478577 21478837 -82016137 - ORR1E LTR MaLR 0 379 111 6 748 6326 86 9 1 chr15 21479678 21480551 -82014423 - L1_Mus1 LINE L1 -1 6566 5687 6 748 2802 93 0 3 chr15 21480549 21480937 -82014037 + L1_Mm LINE L1 4523 4909 -974 6 748 1064 308 54 9 chr15 21480939 21481368 -82013606 - Lx9 LINE L1 -212 7432 6985 6 748 6040 41 11 8 chr15 21481444 21482206 -82012768 - L1Md_T LINE L1 -2 6580 5817 6 748 495 338 40 0 chr15 21482233 21482458 -82012516 - Lx9 LINE L1 -669 6975 6742 6 748 195 42 0 0 chr15 21482458 21482482 -82012492 + (TTA)n Simple_repeat Simple_repeat 3 26 0 6 748 256 350 30 115 chr15 21483311 21483511 -82011463 + B4A SINE B4 25 207 -85 6 748 940 109 19 0 chr15 21483523 21483679 -82011295 + (GAAA)n Simple_repeat Simple_repeat 2 160 0 6 748 341 102 0 17 chr15 21483699 21483759 -82011215 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 748 207 0 0 0 chr15 21484027 21484050 -82010924 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 6 748 583 238 583 62 chr15 21484305 21484483 -82010491 - ORR1D2 LTR MaLR -1 369 100 6 748 962 123 6 0 chr15 21484483 21484645 -82010329 + (GA)n Simple_repeat Simple_repeat 1 163 0 6 748 250 238 107 0 chr15 21484645 21484722 -82010252 - ORR1D2 LTR MaLR -271 99 14 6 748 231 114 0 0 chr15 21484916 21484960 -82010014 + (A)n Simple_repeat Simple_repeat 1 44 0 6 748 2724 140 17 11 chr15 21485142 21485605 -82009369 - Lx2A1 LINE L1 -6 7002 6537 6 748 227 293 58 30 chr15 21487061 21487162 -82007812 + MIRb SINE MIR 111 219 -43 6 748 246 62 0 0 chr15 21487204 21487236 -82007738 + (TC)n Simple_repeat Simple_repeat 2 33 0 6 748 188 290 10 97 chr15 21488523 21488626 -82006348 - L3 LINE CR1 -1915 2574 2481 6 748 291 357 0 0 chr15 21489001 21489099 -82005875 + MTE2b LTR MaLR 1 98 -281 6 748 738 276 84 4 chr15 21489176 21489402 -82005572 + MTE2b LTR MaLR 128 371 -8 6 748 920 295 43 15 chr15 21489409 21489736 -82005238 + MTE2b-int LTR MaLR 1 336 -1244 6 748 223 215 43 11 chr15 21490158 21490252 -82004722 + (TATAA)n Simple_repeat Simple_repeat 1 97 0 6 748 287 384 74 15 chr15 21490598 21490733 -82004241 - RSINE1 SINE B4 -17 148 6 6 748 453 36 0 0 chr15 21491053 21491108 -82003866 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 748 22 0 0 0 chr15 21491505 21491527 -82003447 + AT_rich Low_complexity Low_complexity 1 22 0 6 748 32 0 0 0 chr15 21491644 21491676 -82003298 + AT_rich Low_complexity Low_complexity 1 32 0 6 748 27 29 0 0 chr15 21491941 21491975 -82002999 + AT_rich Low_complexity Low_complexity 1 34 0 6 748 24 0 0 0 chr15 21492044 21492068 -82002906 + AT_rich Low_complexity Low_complexity 1 24 0 6 748 1325 199 48 69 chr15 21492395 21492729 -82002245 + ORR1B1 LTR MaLR 1 327 -2 6 748 7771 190 63 62 chr15 21492729 21494687 -82000287 + ORR1B1-int LTR MaLR 1 1962 -1 6 748 1566 175 34 45 chr15 21494694 21494967 -82000007 + ORR1B1 LTR MaLR 41 314 -80 6 748 2724 25 6 27 chr15 21494967 21495301 -81999673 - IAPLTR2b LTR ERVK 0 327 1 6 748 1566 175 34 45 chr15 21495301 21495385 -81999589 + ORR1B1 LTR MaLR 315 394 0 6 748 23 0 0 0 chr15 21495635 21495658 -81999316 + AT_rich Low_complexity Low_complexity 1 23 0 6 749 23 0 0 0 chr15 21495876 21495899 -81999075 + AT_rich Low_complexity Low_complexity 1 23 0 6 749 736 289 158 17 chr15 21495949 21496353 -81998621 + MTD LTR MaLR 8 398 -21 6 749 1080 254 51 51 chr15 21496530 21496944 -81998030 - BGLII_B LTR ERVK -27 414 1 6 749 2893 31 45 0 chr15 21497243 21497598 -81997376 - L1Md_F2 LINE L1 0 6582 6212 6 749 6230 183 21 36 chr15 21497796 21498439 -81996535 - Lx4A LINE L1 0 7058 6417 6 749 4175 145 66 100 chr15 21498439 21499377 -81995597 - RMER17A2 LTR ERVK 0 906 1 6 749 6230 183 21 36 chr15 21499377 21499994 -81994980 - Lx4A LINE L1 -642 6416 5818 6 749 6278 142 33 7 chr15 21500006 21501087 -81993887 - L1_Mur2 LINE L1 -96 5781 4672 1 749 602 333 88 36 chr15 21501162 21501629 -81993345 - RLTR16 LTR ERVK -12 493 3 2 749 576 42 0 0 chr15 21501932 21502003 -81992971 + (TA)n Simple_repeat Simple_repeat 2 72 0 3 749 207 0 0 0 chr15 21502039 21502062 -81992912 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 749 1627 105 8 4 chr15 21502071 21502319 -81992655 - L1_Mus1 LINE L1 0 6567 6319 5 749 751 189 8 0 chr15 21502319 21502451 -81992523 + B1_Mur4 SINE Alu 13 145 -5 6 749 285 271 0 0 chr15 21503323 21503382 -81991592 + MER20 DNA MER1_type 137 195 -24 7 749 29 28 0 0 chr15 21505783 21505819 -81989155 + AT_rich Low_complexity Low_complexity 1 36 0 8 749 448 354 61 20 chr15 21505873 21506069 -81988905 - ID_B1 SINE B4 -16 208 5 9 749 541 308 54 29 chr15 21506254 21506458 -81988516 - MT2B LTR ERVL -8 593 385 1 749 634 148 0 9 chr15 21506602 21506711 -81988263 - Lx5 LINE L1 -1332 5718 5611 1 749 298 204 28 67 chr15 21506711 21506809 -81988165 - MT2B LTR ERVL -359 174 103 1 749 491 189 163 8 chr15 21506809 21506932 -81988042 - MT2B LTR ERVL -391 142 1 1 749 258 304 203 22 chr15 21509053 21509191 -81985783 - Tigger5 DNA MER2_type -108 2298 2136 1 749 1011 292 48 40 chr15 21509708 21510079 -81984895 + ORR1D1 LTR MaLR 1 374 0 1 749 272 62 0 0 chr15 21510310 21510358 -81984616 - L1Md_F2 LINE L1 -2 6580 6533 1 749 25 0 0 0 chr15 21510647 21510672 -81984302 + AT_rich Low_complexity Low_complexity 1 25 0 1 749 23 33 0 0 chr15 21511423 21511453 -81983521 + AT_rich Low_complexity Low_complexity 1 30 0 1 749 4244 49 0 2 chr15 21511589 21512116 -81982858 + L1Md_F3 LINE L1 6045 6570 -14 1 749 25 31 0 0 chr15 21512320 21512352 -81982622 + AT_rich Low_complexity Low_complexity 1 32 0 1 749 21 36 0 0 chr15 21512461 21512489 -81982485 + AT_rich Low_complexity Low_complexity 1 28 0 1 749 249 33 0 0 chr15 21512810 21512840 -81982134 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 749 482 91 13 0 chr15 21515164 21515241 -81979733 + (TC)n Simple_repeat Simple_repeat 1 78 0 2 749 330 26 0 0 chr15 21516306 21516345 -81978629 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 749 22 0 0 0 chr15 21518980 21519002 -81975972 + AT_rich Low_complexity Low_complexity 1 22 0 2 749 430 330 29 48 chr15 21520030 21520240 -81974734 + B3 SINE B2 9 214 -2 2 749 372 43 0 0 chr15 21520535 21520581 -81974393 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 749 5096 278 63 30 chr15 21522747 21522975 -81971999 - Lx6 LINE L1 0 7460 7214 2 749 180 0 0 0 chr15 21522975 21522995 -81971979 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 749 5096 278 58 38 chr15 21522995 21524388 -81970586 - Lx6 LINE L1 -247 7213 5789 2 749 359 263 14 36 chr15 21524557 21524695 -81970279 + CT-rich Low_complexity Low_complexity 1 135 0 2 749 324 316 51 35 chr15 21524814 21525011 -81969963 - L1MC3 LINE L1 -45 7740 7541 2 749 383 356 49 18 chr15 21525560 21525723 -81969251 - B4A SINE B4 -10 282 115 3 749 445 270 122 22 chr15 21526483 21526790 -81968184 - L1MC3 LINE L1 -353 5991 5653 2 749 313 311 65 71 chr15 21526825 21527119 -81967855 - L1MC3 LINE L1 -612 5567 5276 2 749 496 324 151 26 chr15 21527702 21528232 -81966742 - L1MC3 LINE L1 -1439 4707 4112 2 749 340 315 74 45 chr15 21528798 21529107 -81965867 - L1MD LINE L1 -2686 3460 3143 3 749 2064 96 2 179 chr15 21529126 21529584 -81965390 - L1_Mus4 LINE L1 -3 6633 6257 3 749 573 93 19 67 chr15 21529583 21529687 -81965287 + L1_Mus4 LINE L1 5729 5827 -809 3 749 331 297 141 51 chr15 21529708 21530127 -81964847 - L1MC LINE L1 -3004 3142 2688 3 749 234 0 0 0 chr15 21530127 21530153 -81964821 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 749 331 297 141 51 chr15 21530153 21530222 -81964752 - L1MC LINE L1 -3459 2687 2610 3 749 6530 157 15 19 chr15 21530361 21531441 -81963533 - Lx2 LINE L1 -2 6995 5912 3 749 180 0 0 0 chr15 21531441 21531461 -81963513 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 749 6530 157 15 19 chr15 21531461 21531583 -81963391 - Lx2 LINE L1 -1086 5911 5798 3 749 560 322 138 0 chr15 21531678 21531976 -81962998 - MERVK26-int LTR ERVK -5356 1563 1225 3 749 5143 93 14 50 chr15 21532810 21533644 -81961330 + RLTR22_Mur LTR ERVK 1 804 -1044 3 749 1073 138 13 98 chr15 21533787 21534012 -81960962 + RLTR22_Mur LTR ERVK 1624 1829 -19 3 749 731 11 11 0 chr15 21534037 21534125 -81960849 + (TC)n Simple_repeat Simple_repeat 2 90 0 4 749 440 195 39 0 chr15 21534197 21534325 -81960649 + CT-rich Low_complexity Low_complexity 6 138 0 4 749 558 306 56 24 chr15 21534338 21534589 -81960385 - B4A SINE B4 -28 264 6 4 749 534 31 0 0 chr15 21536043 21536107 -81958867 + (TA)n Simple_repeat Simple_repeat 2 65 0 4 749 1647 153 26 16 chr15 21537729 21538042 -81956932 - Lx2 LINE L1 -4 6993 6678 4 749 21 36 0 0 chr15 21538561 21538589 -81956385 + AT_rich Low_complexity Low_complexity 1 28 0 4 749 1497 263 99 119 chr15 21539023 21539640 -81955334 - RMER17B LTR ERVK -43 915 347 4 749 996 90 18 0 chr15 21539640 21539807 -81955167 + (GA)n Simple_repeat Simple_repeat 1 170 0 4 749 1497 263 99 119 chr15 21539807 21540122 -81954852 - RMER17B LTR ERVK -612 346 4 4 749 1228 295 33 4 chr15 21540124 21540641 -81954333 - Lx5 LINE L1 -103 7357 6455 4 749 197 0 71 0 chr15 21541414 21541442 -81953532 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 4 749 3690 75 36 2 chr15 21541868 21542362 -81952612 - L1_Mus1 LINE L1 0 6567 6057 5 749 3341 53 0 0 chr15 21542363 21542778 -81952196 + L1_Mus1 LINE L1 5656 6070 -497 5 749 1652 251 35 20 chr15 21542960 21543363 -81951611 - Lx5 LINE L1 0 7050 6658 5 749 243 74 36 36 chr15 21543615 21543671 -81951303 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 5 749 3184 249 79 46 chr15 21544169 21545231 -81949743 + Lx5 LINE L1 5950 7046 -4 5 749 203 167 0 0 chr15 21545257 21545293 -81949681 + A-rich Low_complexity Low_complexity 2 37 0 5 749 233 197 0 16 chr15 21545326 21545388 -81949586 + (TATG)n Simple_repeat Simple_repeat 2 62 0 5 749 28 48 0 0 chr15 21545393 21545435 -81949539 + AT_rich Low_complexity Low_complexity 1 42 0 5 749 1880 231 71 10 chr15 21545516 21546007 -81948967 + RLTR11A2 LTR ERVK 7 527 0 5 749 293 315 58 40 chr15 21546765 21546790 -81948184 - Lx3B LINE L1 0 7009 6986 5 749 453 176 56 8 chr15 21546790 21546916 -81948058 - Lx3B LINE L1 -4 6969 6838 5 749 478 233 52 55 chr15 21546916 21547117 -81947857 - Lx3B LINE L1 -24 6985 6757 5 749 781 257 107 56 chr15 21549222 21549597 -81945377 + Lx9 LINE L1 6994 7387 -257 6 749 243 0 0 0 chr15 21549657 21549684 -81945290 + (T)n Simple_repeat Simple_repeat 1 27 0 6 749 23 0 0 0 chr15 21550249 21550272 -81944702 + AT_rich Low_complexity Low_complexity 1 23 0 6 749 913 80 63 28 chr15 21550837 21550979 -81943995 + B1_Mus1 SINE Alu 2 148 0 6 749 260 27 0 26 chr15 21550979 21551017 -81943957 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 6 749 189 0 0 0 chr15 21551138 21551159 -81943815 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 6 749 5226 251 54 18 chr15 21551257 21551306 -81943668 - Lx5 LINE L1 -8 7042 6993 6 749 522 0 0 0 chr15 21551306 21551364 -81943610 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 749 5226 251 54 18 chr15 21551364 21552221 -81942753 - Lx5 LINE L1 -58 6992 6103 6 749 650 31 41 0 chr15 21552221 21552318 -81942656 + (TC)n Simple_repeat Simple_repeat 2 102 0 6 749 5226 224 26 30 chr15 21552318 21553379 -81941595 - Lx5 LINE L1 -948 6102 5036 6 749 1856 169 178 26 chr15 21553379 21553835 -81941139 - RLTR11A LTR ERVK -3 525 1 6 749 4173 217 19 33 chr15 21553835 21553984 -81940990 - Lx5 LINE L1 -842 5035 4888 6 749 914 241 33 5 chr15 21553988 21554045 -81940929 - Lx5 LINE L1 -3172 2708 2643 6 749 282 29 0 0 chr15 21554045 21554080 -81940894 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 749 914 244 33 6 chr15 21554080 21554293 -81940681 - Lx5 LINE L1 -3228 2652 2435 6 749 28 0 0 0 chr15 21555543 21555571 -81939403 + AT_rich Low_complexity Low_complexity 1 28 0 7 749 344 261 65 40 chr15 21556772 21556896 -81938078 - Tigger5 DNA MER2_type -2102 304 178 7 749 336 364 113 30 chr15 21557840 21558336 -81936638 + L1M5 LINE L1 5286 5822 -342 7 749 5213 138 27 21 chr15 21558366 21559254 -81935720 + Lx3A LINE L1 6086 6978 -3 7 749 610 205 115 104 chr15 21559577 21559935 -81935039 - RMER16 LTR ERVK 0 533 1 7 749 198 0 0 0 chr15 21560181 21560203 -81934771 + (A)n Simple_repeat Simple_repeat 1 22 0 7 749 183 235 58 19 chr15 21560463 21560515 -81934459 + MIRb SINE MIR 117 170 -98 7 749 369 303 46 98 chr15 21560918 21561112 -81933862 + MLT1E2 LTR MaLR 444 627 0 7 749 252 315 11 33 chr15 21562147 21562239 -81932735 + PB1D10 SINE Alu 20 109 -8 7 749 2243 242 83 47 chr15 21562368 21563032 -81931942 + Lx5 LINE L1 6362 7049 -1 8 749 280 200 0 0 chr15 21563067 21563112 -81931862 + ID4 SINE ID 11 55 -28 8 749 791 140 0 14 chr15 21563460 21563605 -81931369 - Lx2 LINE L1 0 6997 6855 8 749 1252 53 0 12 chr15 21563669 21563841 -81931133 + L1_Mus2 LINE L1 6396 6565 -1 8 749 22 35 0 0 chr15 21563966 21563995 -81930979 + AT_rich Low_complexity Low_complexity 1 29 0 8 749 3259 46 2 0 chr15 21564739 21565134 -81929840 + MTA_Mm LTR MaLR 1 396 0 8 749 333 102 0 0 chr15 21565152 21565211 -81929763 + (A)n Simple_repeat Simple_repeat 1 59 0 8 749 4513 285 79 41 chr15 21565292 21567161 -81927813 + Lx9 LINE L1 5587 7493 -151 8 749 2730 249 34 25 chr15 21567200 21568042 -81926932 + L1_Rod LINE L1 4606 5455 -392 8 749 2573 267 48 47 chr15 21569733 21571612 -81923362 + Lx5 LINE L1 5238 7434 -26 8 749 363 44 0 0 chr15 21573265 21573310 -81921664 + (CA)n Simple_repeat Simple_repeat 2 46 0 9 749 249 343 62 57 chr15 21573718 21573829 -81921145 - MLT2B3 LTR ERVL -332 222 112 9 749 587 281 196 10 chr15 21573829 21574141 -81920833 - ORR1D1 LTR MaLR -4 370 1 9 749 249 343 62 57 chr15 21574141 21574239 -81920735 - MLT2B3 LTR ERVL -443 111 12 9 749 1119 68 0 0 chr15 21574505 21574651 -81920323 - B1_Mus1 SINE Alu 0 148 3 9 749 31 0 0 0 chr15 21574707 21574738 -81920236 + AT_rich Low_complexity Low_complexity 1 31 0 9 749 214 266 16 0 chr15 21574738 21574802 -81920172 + GA-rich Low_complexity Low_complexity 1 65 0 9 749 236 30 30 0 chr15 21575068 21575101 -81919873 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 9 749 692 151 7 0 chr15 21575759 21575768 -81919206 + (TCTA)n Simple_repeat Simple_repeat 3 11 0 9 749 2780 84 18 5 chr15 21575768 21576161 -81918813 - MTB LTR MaLR 0 400 3 9 749 692 151 7 0 chr15 21576161 21576290 -81918684 + (TCTA)n Simple_repeat Simple_repeat 1 130 0 9 749 444 317 53 43 chr15 21576298 21576506 -81918468 - B3 SINE B2 -6 210 1 1 749 1899 117 85 0 chr15 21576526 21576833 -81918141 + Lx LINE L1 6322 6654 0 1 749 404 128 13 0 chr15 21577268 21577346 -81917628 + (TC)n Simple_repeat Simple_repeat 2 80 0 1 749 183 100 0 0 chr15 21577346 21577376 -81917598 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 749 434 389 48 18 chr15 21577380 21577838 -81917136 + L1M4 LINE L1 88 559 -5983 1 749 227 237 17 0 chr15 21578455 21578514 -81916460 + L1M2 LINE L1 5563 5622 -690 1 749 21 0 0 0 chr15 21578574 21578595 -81916379 + AT_rich Low_complexity Low_complexity 1 21 0 1 749 21 0 0 0 chr15 21578750 21578771 -81916203 + AT_rich Low_complexity Low_complexity 1 21 0 1 749 337 70 35 0 chr15 21578818 21578875 -81916099 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 749 345 133 0 0 chr15 21579416 21579491 -81915483 + (T)n Simple_repeat Simple_repeat 1 75 0 1 749 1178 98 51 17 chr15 21579748 21579925 -81915049 + B2_Mm2 SINE B2 4 186 -9 1 749 849 221 33 0 chr15 21580238 21580419 -81914555 + B3 SINE B2 16 202 -14 1 749 395 186 14 0 chr15 21581002 21581072 -81913902 - B3 SINE B2 -144 72 2 1 749 222 37 0 0 chr15 21582085 21582112 -81912862 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 749 402 21 0 0 chr15 21582112 21582158 -81912816 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 749 218 323 50 14 chr15 21582505 21582610 -81912364 + PB1D10 SINE Alu 12 115 -2 1 749 823 303 107 16 chr15 21583019 21583338 -81911636 - MTEa LTR MaLR -14 365 18 1 749 587 294 51 59 chr15 21583351 21583604 -81911370 + MTEa-int LTR MaLR 1302 1552 -28 1 749 487 330 42 128 chr15 21583619 21584025 -81910949 + MTEa LTR MaLR 1 371 -8 1 749 378 42 0 0 chr15 21585945 21585993 -81908981 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 749 25 65 0 0 chr15 21586026 21586072 -81908902 + AT_rich Low_complexity Low_complexity 1 46 0 1 749 597 76 0 0 chr15 21586237 21586329 -81908645 + (TTAGGG)n Simple_repeat Simple_repeat 6 97 0 1 749 285 29 0 0 chr15 21586329 21586363 -81908611 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 749 1330 282 50 17 chr15 21586363 21586822 -81908152 - Lx9 LINE L1 -712 6932 6459 1 749 197 109 73 0 chr15 21587479 21587534 -81907440 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 1 749 227 114 23 0 chr15 21587536 21587580 -81907394 + (CATA)n Simple_repeat Simple_repeat 2 46 0 1 749 1345 192 132 19 chr15 21587709 21588027 -81906947 + ORR1B1 LTR MaLR 41 394 0 1 749 3811 121 76 0 chr15 21588739 21589345 -81905629 - Lx3A LINE L1 -3 6978 6327 1 749 212 321 12 36 chr15 21590140 21590224 -81904750 + (ATGGTG)n Simple_repeat Simple_repeat 3 84 0 1 749 1334 298 71 0 chr15 21590475 21590854 -81904120 - MTD LTR MaLR -12 407 2 1 749 931 311 39 77 chr15 21591045 21591743 -81903231 - L1_Mur3 LINE L1 -812 5068 4398 1 749 281 312 44 111 chr15 21592053 21592233 -81902741 + B4 SINE B4 56 223 -69 1 749 633 208 0 65 chr15 21592084 21592238 -81902736 + B1_Mur4 SINE Alu 6 149 -1 1 749 40 49 0 0 chr15 21593484 21593545 -81901429 + AT_rich Low_complexity Low_complexity 1 61 0 1 749 424 307 71 6 chr15 21594600 21594792 -81900182 + Lx8 LINE L1 6803 7016 -457 1 749 684 298 91 52 chr15 21594796 21595104 -81899870 - ORR1E LTR MaLR -38 321 2 1 749 240 35 0 0 chr15 21595189 21595218 -81899756 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 749 24 53 0 0 chr15 21595759 21595797 -81899177 + AT_rich Low_complexity Low_complexity 1 38 0 1 749 218 250 13 65 chr15 21596432 21596509 -81898465 + BC1_Mm scRNA scRNA 27 99 -53 1 749 23 68 0 0 chr15 21596659 21596703 -81898271 + AT_rich Low_complexity Low_complexity 1 44 0 1 749 1127 82 0 0 chr15 21597390 21597537 -81897437 - B1_Mm SINE Alu 0 147 1 1 749 1747 277 34 4 chr15 21598038 21598510 -81896464 - Lx9 LINE L1 -848 6796 6311 1 749 432 311 27 59 chr15 21598558 21598814 -81896160 - Lx9 LINE L1 -1538 6106 5859 1 749 1339 294 32 53 chr15 21598812 21599380 -81895594 + Lx9 LINE L1 6856 7411 -233 1 749 230 179 90 0 chr15 21599380 21599447 -81895527 + (TATATG)n Simple_repeat Simple_repeat 5 77 0 1 749 525 32 0 0 chr15 21599489 21599552 -81895422 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 749 344 181 0 12 chr15 21600891 21600975 -81893999 + (TAG)n Simple_repeat Simple_repeat 1 83 0 1 749 2395 130 22 12 chr15 21601879 21602284 -81892690 - Lx2A1 LINE L1 -2 7006 6598 1 749 257 333 39 86 chr15 21602486 21602614 -81892360 - MER21B LTR ERV1 -193 670 549 1 749 526 355 20 15 chr15 21602715 21602918 -81892056 - MER21B LTR ERV1 -455 408 205 1 749 297 255 10 10 chr15 21603251 21603354 -81891620 + (TA)n Simple_repeat Simple_repeat 2 104 0 1 749 525 71 0 0 chr15 21603568 21603638 -81891336 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 749 38 22 0 0 chr15 21603708 21603753 -81891221 + AT_rich Low_complexity Low_complexity 1 45 0 1 749 28 29 0 0 chr15 21604161 21604196 -81890778 + AT_rich Low_complexity Low_complexity 1 35 0 1 749 21 36 0 0 chr15 21605018 21605046 -81889928 + AT_rich Low_complexity Low_complexity 1 28 0 1 749 21 36 0 0 chr15 21605273 21605301 -81889673 + AT_rich Low_complexity Low_complexity 1 28 0 1 749 4152 122 44 48 chr15 21605771 21606241 -81888733 + L1VL4 LINE L1 243 744 -5558 1 749 1165 55 0 7 chr15 21606241 21606389 -81888585 + B1_Mus2 SINE Alu 1 147 0 1 749 4152 122 44 48 chr15 21606389 21606464 -81888510 + L1VL4 LINE L1 745 788 -5514 1 749 3214 26 34 0 chr15 21606464 21606847 -81888127 - MTA_Mm LTR MaLR 0 396 1 1 749 4971 109 18 3 chr15 21606847 21607690 -81887284 + L1VL4 LINE L1 789 1641 -1918 1 749 983 162 49 0 chr15 21607693 21607878 -81887096 + L1_Mur2 LINE L1 3800 3993 -1893 1 749 736 102 0 0 chr15 21607878 21607986 -81886988 + RLTR9F LTR ERVK 1 108 -307 1 749 911 168 29 11 chr15 21607981 21608156 -81886818 + RLTR9F LTR ERVK 238 415 0 1 749 8814 170 20 96 chr15 21608157 21609586 -81885388 + L1_Mur2 LINE L1 3980 5222 -655 1 749 288 0 0 0 chr15 21609586 21609618 -81885356 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 749 234 0 0 0 chr15 21609618 21609643 -81885331 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 749 8814 170 20 96 chr15 21609643 21610264 -81884710 + L1_Mur2 LINE L1 5223 5876 -1 1 749 2877 179 18 0 chr15 21610286 21610834 -81884140 + Lx LINE L1 6096 6653 -1 1 749 624 148 0 0 chr15 21610834 21610956 -81884018 + (GAAA)n Simple_repeat Simple_repeat 1 122 0 1 749 6314 167 20 7 chr15 21611554 21613258 -81881716 + Lx2B LINE L1 4980 6712 -288 1 749 930 188 66 28 chr15 21615357 21615570 -81879404 + RLTR24 LTR ERV1 3 223 -306 1 749 21 0 0 0 chr15 21615575 21615596 -81879378 + AT_rich Low_complexity Low_complexity 1 21 0 1 749 471 248 21 177 chr15 21615609 21615877 -81879097 + RLTR24 LTR ERV1 133 346 -183 1 749 548 226 14 7 chr15 21616722 21616860 -81878114 + Lx2B LINE L1 6913 7051 -7 1 749 338 107 18 0 chr15 21616860 21616916 -81878058 + (TGAA)n Simple_repeat Simple_repeat 4 60 0 1 749 347 41 0 20 chr15 21616979 21617029 -81877945 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 1 749 585 231 20 20 chr15 21617380 21617526 -81877448 + B1_Mur3 SINE Alu 3 148 -1 1 749 185 0 0 39 chr15 21617542 21617568 -81877406 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 1 749 324 0 0 0 chr15 21617763 21617799 -81877175 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 749 450 0 0 0 chr15 21617799 21617848 -81877126 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 749 333 346 88 7 chr15 21618256 21618393 -81876581 - ID_B1 SINE B4 -65 159 12 1 749 432 147 0 0 chr15 21619318 21619393 -81875581 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 749 582 63 0 0 chr15 21619970 21620049 -81874925 + (CATAA)n Simple_repeat Simple_repeat 4 82 0 1 749 23 33 0 0 chr15 21620996 21621026 -81873948 + AT_rich Low_complexity Low_complexity 1 30 0 1 749 608 219 7 55 chr15 21621241 21621386 -81873588 + B1_Mur4 SINE Alu 13 150 0 1 749 286 53 0 0 chr15 21621490 21621528 -81873446 - L1_Mm LINE L1 -1100 4783 4746 1 749 3855 42 23 0 chr15 21621529 21622006 -81872968 + L1Md_F3 LINE L1 6097 6584 0 1 749 2169 118 29 3 chr15 21622006 21622346 -81872628 + Lx3A LINE L1 6633 6981 0 1 749 1274 319 19 48 chr15 21622417 21622980 -81871994 - Lx8 LINE L1 -598 6875 6329 1 749 1018 307 105 32 chr15 21623079 21623360 -81871614 - MTD LTR MaLR 0 419 115 1 749 3750 90 9 0 chr15 21623360 21623884 -81871090 - L1_Mus3 LINE L1 -4 6634 6106 1 749 1018 307 105 32 chr15 21623884 21623982 -81870992 - MTD LTR MaLR -305 114 12 1 749 3125 65 2 2 chr15 21624777 21625177 -81869797 - MTB LTR MaLR 0 400 1 1 749 22 80 0 0 chr15 21626261 21626311 -81868663 + AT_rich Low_complexity Low_complexity 1 50 0 1 750 21 0 0 0 chr15 21628270 21628291 -81866683 + AT_rich Low_complexity Low_complexity 1 21 0 1 750 408 217 0 0 chr15 21628987 21629079 -81865895 + (CATATA)n Simple_repeat Simple_repeat 4 95 0 1 750 453 298 35 17 chr15 21629496 21629670 -81865304 - Lx7 LINE L1 -345 7351 7175 1 750 303 311 83 6 chr15 21629771 21629939 -81865035 - Lx7 LINE L1 -1755 5941 5761 1 750 24 0 0 0 chr15 21629946 21629970 -81865004 + AT_rich Low_complexity Low_complexity 1 24 0 1 750 271 227 53 13 chr15 21630251 21630327 -81864647 + Lx9 LINE L1 7358 7436 -208 1 750 187 157 48 24 chr15 21630441 21630565 -81864409 + (TTATA)n Simple_repeat Simple_repeat 5 131 0 1 750 201 175 0 0 chr15 21630721 21630761 -81864213 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 750 861 41 0 61 chr15 21630764 21630895 -81864079 - L1_Mus1 LINE L1 0 6567 6445 1 750 24 32 0 0 chr15 21630899 21630930 -81864044 + AT_rich Low_complexity Low_complexity 1 31 0 1 750 290 67 0 22 chr15 21631374 21631420 -81863554 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 1 750 22 0 0 0 chr15 21631636 21631658 -81863316 + AT_rich Low_complexity Low_complexity 1 22 0 1 750 570 323 99 44 chr15 21632226 21632682 -81862292 + Charlie7 DNA MER1_type 810 1290 -1322 1 750 634 201 3 4 chr15 21633037 21633179 -81861795 - Lx4B LINE L1 -290 5866 5694 1 750 2816 84 7 17 chr15 21633183 21633596 -81861378 + BGLII LTR ERVK 1 409 -12 1 750 1144 220 1 9 chr15 21633597 21633842 -81861132 - Lx4B LINE L1 -204 5673 5454 1 750 381 224 0 0 chr15 21634342 21634418 -81860556 + L1_Mm LINE L1 5430 5505 -378 1 750 26 0 0 0 chr15 21634487 21634513 -81860461 + AT_rich Low_complexity Low_complexity 1 26 0 1 750 21 0 0 0 chr15 21634747 21634768 -81860206 + AT_rich Low_complexity Low_complexity 1 21 0 2 750 306 313 34 0 chr15 21634898 21634998 -81859976 + B3A SINE B2 5 107 -109 2 750 3540 64 2 0 chr15 21635011 21635466 -81859508 + L1Md_F2 LINE L1 5131 5586 -297 2 750 7723 58 3 5 chr15 21635467 21636464 -81858510 + L1Md_F2 LINE L1 5588 6582 0 2 750 1931 100 0 51 chr15 21636517 21636833 -81858141 - L1Md_F2 LINE L1 -3 6579 6280 2 750 7890 52 4 1 chr15 21636833 21638164 -81856810 - L1Md_F2 LINE L1 -32 6550 5218 2 750 7107 74 3 2 chr15 21638163 21639115 -81855859 + L1Md_F2 LINE L1 4260 5212 -671 2 750 446 310 7 0 chr15 21639112 21639257 -81855717 - Lx7 LINE L1 -365 7331 7186 2 750 2901 263 53 13 chr15 21639270 21640044 -81854930 - Lx7 LINE L1 -646 7050 6246 2 750 198 71 0 0 chr15 21640044 21640072 -81854902 + (ATTG)n Simple_repeat Simple_repeat 3 30 0 2 750 319 365 168 24 chr15 21640141 21640391 -81854583 - B4A SINE B4 -6 286 1 2 750 29 28 0 0 chr15 21640944 21640980 -81853994 + AT_rich Low_complexity Low_complexity 1 36 0 2 750 189 0 0 0 chr15 21641211 21641232 -81853742 + (TA)n Simple_repeat Simple_repeat 1 21 0 2 750 618 247 143 57 chr15 21641746 21641991 -81852983 + RMER21B LTR ERV1 302 567 -275 2 750 233 75 0 24 chr15 21642529 21642570 -81852404 + (TTTC)n Simple_repeat Simple_repeat 1 40 0 2 750 32 26 0 0 chr15 21642728 21642767 -81852207 + AT_rich Low_complexity Low_complexity 1 39 0 2 750 540 385 47 11 chr15 21643303 21643581 -81851393 - B4A SINE B4 0 292 5 2 750 198 0 0 0 chr15 21645016 21645038 -81849936 + (A)n Simple_repeat Simple_repeat 1 22 0 2 750 510 335 90 56 chr15 21646279 21647150 -81847824 + L1M4 LINE L1 4267 5175 -971 2 750 331 323 83 31 chr15 21647174 21647462 -81847512 - MLT1B LTR MaLR -18 372 70 2 750 275 0 0 28 chr15 21647608 21647644 -81847330 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2 750 996 88 62 12 chr15 21647881 21648042 -81846932 + L1Md_F2 LINE L1 6410 6578 -4 2 750 2490 152 12 2 chr15 21648167 21648588 -81846386 - Lx LINE L1 -9 6645 6221 2 750 243 263 50 59 chr15 21648697 21648798 -81846176 + RLTR12B LTR ERVK 17 116 -412 2 750 269 291 69 53 chr15 21648867 21649056 -81845918 + RLTR15 LTR ERVK 48 239 -120 2 750 3338 26 128 5 chr15 21649240 21649663 -81845311 + IAPLTR2_Mm LTR ERVK 1 475 0 2 750 943 132 25 85 chr15 21649664 21649863 -81845111 + IAPEz-int LTR ERVK 9 195 -6286 2 750 260 283 0 0 chr15 21649863 21649916 -81845058 + RLTR27 LTR ERVK 223 275 -34 2 750 3871 55 2 18 chr15 21649916 21650419 -81844555 + IAPEz-int LTR ERVK 168 662 -5819 2 750 2690 58 0 6 chr15 21650419 21650763 -81844211 + IAPEz-int LTR ERVK 1359 1700 -4781 2 750 6212 65 12 18 chr15 21650756 21651590 -81843384 + IAPEz-int LTR ERVK 5651 6479 -2 2 750 3362 24 128 5 chr15 21651592 21652015 -81842959 + IAPLTR2_Mm LTR ERVK 1 475 0 2 750 299 256 0 82 chr15 21652533 21652631 -81842343 - RMER15 LTR ERVL -56 519 430 2 750 791 48 10 0 chr15 21652633 21652737 -81842237 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 2 750 447 297 23 0 chr15 21652808 21652936 -81842038 - RMER15 LTR ERVL -159 416 286 2 750 593 298 66 28 chr15 21653465 21653676 -81841298 - RMER15 LTR ERVL -349 226 8 2 750 1010 179 39 0 chr15 21654548 21654727 -81840247 - B2_Mm2 SINE B2 -4 191 6 2 750 196 77 25 25 chr15 21654863 21654903 -81840071 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2 750 221 196 0 42 chr15 21654963 21654985 -81839989 + polypyrimidine Low_complexity Low_complexity 25 46 0 2 750 1010 140 0 6 chr15 21654985 21655165 -81839809 + (TCC)n Simple_repeat Simple_repeat 2 180 0 2 750 221 196 0 42 chr15 21655165 21655190 -81839784 + polypyrimidine Low_complexity Low_complexity 1 24 0 2 750 2351 246 6 72 chr15 21655380 21656047 -81838927 - RMER1B Other Other -2 1064 442 2 750 988 326 20 31 chr15 21656151 21656710 -81838264 - RMER1B Other Other -468 874 135 2 750 262 324 56 49 chr15 21656788 21657053 -81837921 + MTC LTR MaLR 58 369 -5 2 750 225 333 14 0 chr15 21657853 21657925 -81837049 - MurSatRep1 Unknown Unknown -1835 302 230 2 750 1000 122 0 0 chr15 21658301 21658440 -81836534 + B1_Mus1 SINE Alu 5 143 -5 2 750 21 82 0 0 chr15 21659491 21659540 -81835434 + AT_rich Low_complexity Low_complexity 1 49 0 2 750 871 312 59 40 chr15 21659640 21659850 -81835124 + L1_Rod LINE L1 5104 5330 -517 2 750 553 328 77 0 chr15 21659850 21660045 -81834929 - B3 SINE B2 -6 210 1 2 750 871 312 59 40 chr15 21660045 21660508 -81834466 + L1_Rod LINE L1 5331 5790 -57 2 750 21 0 0 0 chr15 21661337 21661358 -81833616 + AT_rich Low_complexity Low_complexity 1 21 0 2 750 189 0 0 0 chr15 21662020 21662041 -81832933 + (A)n Simple_repeat Simple_repeat 1 21 0 2 750 277 371 87 16 chr15 21662211 21662337 -81832637 - B4 SINE B4 -4 288 154 2 750 480 62 0 0 chr15 21662457 21662521 -81832453 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 750 339 148 0 0 chr15 21662522 21662583 -81832391 + Lx2 LINE L1 4966 5026 -860 2 750 3091 114 17 0 chr15 21662585 21663049 -81831925 - L1_Mm LINE L1 -78 5805 5334 2 750 8450 143 15 14 chr15 21663047 21664557 -81830417 + Lx2 LINE L1 5481 6992 -5 2 750 624 323 142 30 chr15 21664754 21665156 -81829818 - Lx8 LINE L1 -575 6898 6452 2 750 287 349 8 8 chr15 21665162 21665281 -81829693 + Lx8 LINE L1 6904 7023 -450 2 750 668 74 11 0 chr15 21665395 21665490 -81829484 + (TTCC)n Simple_repeat Simple_repeat 1 96 0 2 750 204 67 0 0 chr15 21666205 21666235 -81828739 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2 750 624 27 0 0 chr15 21668448 21668522 -81826452 + (TC)n Simple_repeat Simple_repeat 1 74 0 2 750 24 53 0 0 chr15 21669039 21669077 -81825897 + AT_rich Low_complexity Low_complexity 1 38 0 2 750 25 51 0 0 chr15 21669096 21669135 -81825839 + AT_rich Low_complexity Low_complexity 1 39 0 2 750 299 270 8 139 chr15 21669242 21669371 -81825603 + MTE2a LTR MaLR 4 115 -264 2 750 253 267 198 0 chr15 21669443 21669544 -81825430 + MTE2a LTR MaLR 235 355 -24 2 750 206 277 0 0 chr15 21670471 21670518 -81824456 + (TTA)n Simple_repeat Simple_repeat 2 48 0 2 750 2676 206 46 7 chr15 21670525 21671087 -81823887 - Lx3C LINE L1 -2 6974 6391 2 750 3777 172 14 72 chr15 21671080 21671887 -81823087 + Lx3C LINE L1 5603 6362 -614 2 750 22 35 0 0 chr15 21672138 21672167 -81822807 + AT_rich Low_complexity Low_complexity 1 29 0 2 750 48 53 0 0 chr15 21672285 21672361 -81822613 + AT_rich Low_complexity Low_complexity 1 76 0 2 750 390 42 0 0 chr15 21672874 21672922 -81822052 + (A)n Simple_repeat Simple_repeat 1 48 0 2 750 23 54 0 0 chr15 21673474 21673511 -81821463 + AT_rich Low_complexity Low_complexity 1 37 0 2 750 249 375 134 0 chr15 21673641 21673753 -81821221 + MLT1H2 LTR MaLR 225 351 -138 2 750 368 181 51 0 chr15 21674756 21674894 -81820080 + (CAGAGA)n Simple_repeat Simple_repeat 4 148 0 2 750 33298 69 9 6 chr15 21675095 21677528 -81817446 - L1Md_F2 LINE L1 0 6582 4134 2 750 333 0 0 0 chr15 21677528 21677565 -81817409 + (TC)n Simple_repeat Simple_repeat 2 38 0 2 750 33298 85 4 10 chr15 21677565 21679734 -81815240 - L1Md_F2 LINE L1 -1750 4133 1975 2 750 210 37 0 0 chr15 21679734 21679761 -81815213 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 750 33298 92 5 16 chr15 21679761 21681435 -81813539 - L1Md_F2 LINE L1 -3909 1974 344 2 750 1008 40 0 0 chr15 21681677 21681803 -81813171 - B1_Mus1 SINE Alu -9 139 14 2 750 1618 218 12 18 chr15 21682677 21683014 -81811960 + RLTR25B LTR ERVK 1 335 -693 2 750 3277 181 38 0 chr15 21683014 21683649 -81811325 - L1_Mur2 LINE L1 -862 5015 4357 2 750 2047 41 7 254 chr15 21683649 21684109 -81810865 - RLTR10 LTR ERVK 0 390 45 2 750 4690 229 88 25 chr15 21684130 21685395 -81809579 + Lx2B LINE L1 5656 7000 0 2 750 6595 51 43 0 chr15 21685410 21686230 -81808744 + RLTR13A LTR ERVK 1 855 0 2 750 247 200 0 41 chr15 21686240 21686313 -81808661 + (TA)n Simple_repeat Simple_repeat 1 70 0 2 750 522 281 149 16 chr15 21686348 21686536 -81808438 + Lx6 LINE L1 7248 7460 0 2 750 294 324 34 59 chr15 21686602 21686720 -81808254 + B3A SINE B2 46 160 -38 2 750 1104 254 80 0 chr15 21686752 21687039 -81807935 - MTC LTR MaLR -24 397 88 2 750 542 213 63 19 chr15 21687047 21687205 -81807769 + L1_Mur3 LINE L1 3953 4117 -1763 2 750 368 303 11 0 chr15 21688002 21688091 -81806883 - ID_B1 SINE B4 -41 183 94 2 750 310 21 43 0 chr15 21688108 21688155 -81806819 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 750 852 80 0 8 chr15 21688209 21688335 -81806639 + Lx LINE L1 6522 6646 -8 2 750 342 0 0 0 chr15 21688946 21688984 -81805990 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 750 1938 214 77 78 chr15 21689199 21689696 -81805278 - RLTR12A LTR ERVK -3 565 70 2 750 405 353 0 0 chr15 21689725 21689858 -81805116 - RSINE1 SINE B4 -22 143 11 2 750 21 0 0 0 chr15 21691219 21691240 -81803734 + AT_rich Low_complexity Low_complexity 1 21 0 2 750 4746 157 75 3 chr15 21691892 21692732 -81802242 + Lx2 LINE L1 5848 6751 -246 2 750 651 122 0 9 chr15 21692732 21692848 -81802126 + Lx LINE L1 6540 6654 0 2 750 4746 157 75 3 chr15 21692848 21692880 -81802094 + Lx2 LINE L1 6752 6782 -215 2 750 2194 153 10 26 chr15 21692889 21693305 -81801669 + RLTR9E LTR ERVK 1 409 0 2 750 1734 247 29 96 chr15 21693495 21694149 -81800825 - RMER19C LTR ERVK -1 610 1 2 750 29 47 0 0 chr15 21694188 21694231 -81800743 + AT_rich Low_complexity Low_complexity 1 43 0 2 750 1194 348 59 32 chr15 21694935 21695980 -81798994 - Lx9 LINE L1 -154 7490 6417 2 750 603 103 0 0 chr15 21696168 21696265 -81798709 + (TG)n Simple_repeat Simple_repeat 1 97 0 2 750 265 419 80 16 chr15 21696266 21696516 -81798458 - B4 SINE B4 -16 276 11 2 750 273 209 0 0 chr15 21697460 21697527 -81797447 + (CATATA)n Simple_repeat Simple_repeat 5 71 0 2 750 443 220 30 8 chr15 21697816 21697949 -81797025 - MERVL_2A-int LTR ERVL -6 5755 5620 2 750 510 259 6 90 chr15 21697958 21698136 -81796838 - ORR1D-int LTR MaLR -1160 349 187 2 750 549 68 0 0 chr15 21698142 21698216 -81796758 + (CA)n Simple_repeat Simple_repeat 2 75 0 2 750 2716 156 19 2 chr15 21698559 21699021 -81795953 + Lx2 LINE L1 6527 6996 -1 2 750 183 114 0 0 chr15 21699689 21699724 -81795250 + (A)n Simple_repeat Simple_repeat 1 35 0 2 750 237 302 153 45 chr15 21699749 21699860 -81795114 + ID_B1 SINE B4 81 203 -21 2 750 2433 77 6 0 chr15 21699875 21700198 -81794776 - L1_Mus1 LINE L1 -1 6566 6242 2 750 186 260 0 57 chr15 21702846 21702899 -81792075 - L2b LINE L2 -48 3327 3278 2 750 359 119 15 0 chr15 21703011 21703078 -81791896 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 750 637 244 25 106 chr15 21703152 21703427 -81791547 + Lx9 LINE L1 6993 7245 -399 2 750 1296 156 61 8 chr15 21704322 21704568 -81790406 + RLTR11A LTR ERVK 268 526 -2 2 750 2289 67 104 9 chr15 21704636 21704952 -81790022 - ORR1A1 LTR MaLR 0 346 1 3 750 2710 244 52 9 chr15 21705020 21705652 -81789322 + Lx5 LINE L1 6375 7033 -17 3 750 13848 116 6 5 chr15 21705703 21706989 -81787985 + MERVL-int LTR ERVL 3358 4646 -839 3 750 2283 75 116 11 chr15 21706989 21707342 -81787632 + RLTR10 LTR ERVK 1 390 0 3 750 13848 116 6 5 chr15 21707342 21708052 -81786922 + MERVL-int LTR ERVL 4647 5356 -129 3 750 268 200 14 41 chr15 21708174 21708247 -81786727 + ORR1A3-int LTR MaLR 569 639 -1324 3 750 277 79 0 0 chr15 21708248 21708286 -81786688 + MERVL-int LTR ERVL 5448 5485 0 3 750 3033 116 19 39 chr15 21708288 21708771 -81786203 + MT2C_Mm LTR ERVL 3 475 0 3 750 186 43 0 0 chr15 21709117 21709140 -81785834 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 3 750 268 229 132 105 chr15 21709184 21709374 -81785600 - L1MA7 LINE L1 -256 6035 5841 3 750 201 154 0 0 chr15 21710835 21710874 -81784100 + T-rich Low_complexity Low_complexity 1 39 0 3 750 4094 95 20 17 chr15 21711355 21711957 -81783017 + Lx LINE L1 6051 6654 0 3 750 264 311 65 16 chr15 21712571 21712695 -81782279 - L1MA4 LINE L1 -371 5929 5800 3 750 403 239 462 27 chr15 21712934 21713190 -81781784 + MTEa LTR MaLR 3 371 -8 3 750 304 316 13 36 chr15 21714066 21714184 -81780790 - B1_Mur1 SINE Alu 0 149 7 3 750 21 0 0 0 chr15 21714388 21714409 -81780565 + AT_rich Low_complexity Low_complexity 1 21 0 3 750 30 45 0 0 chr15 21714418 21714462 -81780512 + AT_rich Low_complexity Low_complexity 1 44 0 3 750 21 0 0 0 chr15 21714715 21714736 -81780238 + AT_rich Low_complexity Low_complexity 1 21 0 3 750 4735 30 23 0 chr15 21715770 21716334 -81778640 + L1Md_F2 LINE L1 5994 6570 -12 3 750 488 378 47 19 chr15 21716552 21716765 -81778209 - ID_B1 SINE B4 -4 220 2 3 750 4049 173 77 10 chr15 21716866 21716881 -81778093 - Lx3C LINE L1 0 6976 6966 3 750 387 0 0 0 chr15 21716881 21716924 -81778050 + (TTA)n Simple_repeat Simple_repeat 3 45 0 3 750 4049 173 77 10 chr15 21716924 21717702 -81777272 - Lx3C LINE L1 -11 6965 6130 3 750 20928 168 50 28 chr15 21717678 21719032 -81775942 - Lx3C LINE L1 -1011 5965 4640 3 750 252 86 0 0 chr15 21719032 21719067 -81775907 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 750 20928 173 35 31 chr15 21719067 21721625 -81773349 - Lx3C LINE L1 -1247 4639 2052 3 750 351 0 0 0 chr15 21721625 21721664 -81773310 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 750 20928 175 41 54 chr15 21721664 21722983 -81771991 - Lx3C LINE L1 -3835 2051 744 3 750 3225 86 70 7 chr15 21723258 21723714 -81771260 - L1Md_F2 LINE L1 -13 6569 6085 3 750 19012 113 25 11 chr15 21723714 21727330 -81767644 - L1Md_F LINE L1 -2034 3849 203 3 750 32 26 0 0 chr15 21727596 21727635 -81767339 + AT_rich Low_complexity Low_complexity 1 39 0 3 750 25 0 0 0 chr15 21728951 21728976 -81765998 + AT_rich Low_complexity Low_complexity 1 25 0 3 750 21 0 0 0 chr15 21730365 21730386 -81764588 + AT_rich Low_complexity Low_complexity 1 21 0 3 750 1428 258 25 19 chr15 21730699 21731066 -81763908 + ORR1D1 LTR MaLR 1 369 -5 3 750 3645 126 88 3 chr15 21731128 21731732 -81763242 - Lx LINE L1 -12 6642 5988 3 750 223 26 24 49 chr15 21731743 21731784 -81763190 + (CAA)n Simple_repeat Simple_repeat 2 41 0 3 750 6125 177 16 9 chr15 21731789 21732946 -81762028 + L1_Mm LINE L1 4700 5863 -20 3 750 294 29 0 0 chr15 21732946 21732981 -81761993 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 750 249 189 176 0 chr15 21733553 21733627 -81761347 + Lx9 LINE L1 7554 7640 -4 3 750 676 348 52 8 chr15 21733766 21734105 -81760869 + ORR1E LTR MaLR 2 374 -5 3 750 414 0 0 0 chr15 21734150 21734196 -81760778 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 750 230 340 52 0 chr15 21734436 21734533 -81760441 + Tigger5 DNA MER2_type 2289 2390 -16 3 750 24 67 0 0 chr15 21734598 21734643 -81760331 + AT_rich Low_complexity Low_complexity 1 45 0 3 750 2348 203 57 26 chr15 21735674 21736273 -81758701 + RMER6C LTR ERVK 1 689 -1 3 750 2098 45 0 8 chr15 21738076 21738342 -81756632 - L1_Mus1 LINE L1 -1 6566 6303 3 750 214 203 17 0 chr15 21739517 21739576 -81755398 + (TTTA)n Simple_repeat Simple_repeat 3 62 0 3 750 228 225 43 33 chr15 21740289 21740381 -81754593 - L1M2 LINE L1 -413 5887 5795 3 750 315 274 75 58 chr15 21740532 21740652 -81754322 - MTD LTR MaLR -7 412 291 3 750 1041 82 7 0 chr15 21740758 21740905 -81754069 - B1_Mus1 SINE Alu 0 148 1 3 750 436 281 161 37 chr15 21741032 21741460 -81753514 - L1M2 LINE L1 -1160 4983 4503 3 750 21 0 0 0 chr15 21741737 21741758 -81753216 + AT_rich Low_complexity Low_complexity 1 21 0 3 750 264 30 0 0 chr15 21741940 21741973 -81753001 + (A)n Simple_repeat Simple_repeat 1 33 0 3 750 4478 218 63 16 chr15 21742053 21743443 -81751531 - Lx5 LINE L1 -234 6816 5351 3 750 419 329 43 19 chr15 21743461 21743622 -81751352 - Lx5 LINE L1 -3 7047 6883 3 750 3139 218 21 34 chr15 21743618 21743744 -81751230 - Lx5 LINE L1 -508 5369 5244 3 750 351 0 0 0 chr15 21743744 21743783 -81751191 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 750 3139 218 21 34 chr15 21743783 21743803 -81751171 - Lx5 LINE L1 -634 5243 5231 3 750 300 27 0 0 chr15 21743803 21743840 -81751134 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 750 3139 218 21 34 chr15 21743840 21744332 -81750642 - Lx5 LINE L1 -647 5230 4736 3 750 351 0 0 0 chr15 21744332 21744371 -81750603 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 750 3139 218 21 34 chr15 21744371 21744536 -81750438 - Lx5 LINE L1 -1142 4735 4576 3 750 32449 74 1 3 chr15 21744600 21749791 -81745183 + L1Md_F2 LINE L1 312 5588 -298 3 750 7752 56 9 0 chr15 21749792 21750779 -81744195 + L1Md_F2 LINE L1 5590 6585 0 3 750 21 57 0 0 chr15 21751226 21751261 -81743713 + AT_rich Low_complexity Low_complexity 1 35 0 3 750 23 0 0 0 chr15 21751431 21751454 -81743520 + AT_rich Low_complexity Low_complexity 1 23 0 3 750 344 345 87 82 chr15 21751493 21751676 -81743298 + B3 SINE B2 6 189 -27 3 750 581 353 99 11 chr15 21751748 21751850 -81743124 + Lx8 LINE L1 5951 6057 -1416 3 750 4133 189 66 17 chr15 21751850 21752710 -81742264 + RMER19B LTR ERVK 1 902 0 3 750 867 341 106 23 chr15 21752710 21753313 -81741661 + Lx7 LINE L1 6056 6708 -988 3 750 401 182 10 0 chr15 21753347 21753446 -81741528 + GA-rich Low_complexity Low_complexity 3 102 0 3 750 466 305 36 31 chr15 21753455 21753648 -81741326 + Lx7 LINE L1 6775 6968 -728 3 750 861 230 82 23 chr15 21753764 21754067 -81740907 + Lx9 LINE L1 7315 7635 -9 3 750 22 0 0 0 chr15 21755064 21755086 -81739888 + AT_rich Low_complexity Low_complexity 1 22 0 3 750 495 159 11 0 chr15 21755093 21755181 -81739793 - URR1B DNA MER1_type -1 224 136 3 750 239 291 11 55 chr15 21755215 21755306 -81739668 + ORR1A3-int LTR MaLR 1455 1541 -422 3 750 336 88 0 0 chr15 21755426 21755483 -81739491 + Lx LINE L1 6596 6652 -2 3 93 24076 106 21 12 chr15 21757180 21759304 -81735670 + Lx3_Mus LINE L1 2082 4209 -1677 3 751 3643 9 136 0 chr15 21759304 21759738 -81735236 - MT2_Mm LTR ERVL 0 493 1 3 751 24076 106 21 12 chr15 21759738 21761409 -81733565 + Lx3_Mus LINE L1 4210 5910 -1099 3 751 468 0 0 0 chr15 21761409 21761461 -81733513 + (TAAG)n Simple_repeat Simple_repeat 2 53 0 3 751 2858 66 50 3 chr15 21761461 21761842 -81733132 - MTB LTR MaLR -1 399 1 3 751 8656 129 22 11 chr15 21761842 21762901 -81732073 + Lx3_Mus LINE L1 5911 6985 -24 3 751 216 0 0 0 chr15 21762901 21762925 -81732049 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 3 751 374 206 0 19 chr15 21763359 21763463 -81731511 - Lx2 LINE L1 -1 6996 6895 3 751 28 48 0 0 chr15 21764539 21764581 -81730393 + AT_rich Low_complexity Low_complexity 1 42 0 3 751 206 372 21 0 chr15 21764817 21764911 -81730063 + MER5A DNA MER1_type 94 189 0 3 751 2136 220 69 89 chr15 21765876 21766530 -81728444 - RLTR26 LTR ERVK 0 642 2 3 751 277 299 82 6 chr15 21766618 21766776 -81728198 + L1MA8 LINE L1 6009 6178 -113 3 751 186 43 0 0 chr15 21766789 21766812 -81728162 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 751 540 137 0 0 chr15 21768068 21768170 -81726804 + (CA)n Simple_repeat Simple_repeat 1 102 0 3 751 233 365 92 31 chr15 21768318 21768513 -81726461 + MER70A LTR ERVL 262 468 -4 3 751 5186 264 67 82 chr15 21769142 21770835 -81724139 - Lx7 LINE L1 0 7696 6087 3 751 799 61 9 9 chr15 21770835 21770950 -81724024 + (TTTCC)n Simple_repeat Simple_repeat 3 117 0 3 751 5186 264 67 82 chr15 21770950 21771293 -81723681 - Lx7 LINE L1 -1610 6086 5691 3 751 8944 136 70 13 chr15 21771292 21773520 -81721454 + Lx3_Mus LINE L1 4461 7001 -8 3 751 710 166 33 13 chr15 21773545 21773698 -81721276 + L1_Mur3 LINE L1 4977 5132 -748 3 751 306 0 0 0 chr15 21773746 21773780 -81721194 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 3 751 339 215 0 0 chr15 21773867 21773932 -81721042 + L1_Mur2 LINE L1 4807 4871 -1006 3 751 2418 216 29 6 chr15 21773918 21774443 -81720531 + L1_Mur3 LINE L1 5141 5677 -203 3 751 322 164 45 0 chr15 21775922 21775989 -81718985 - MTD LTR MaLR -5 414 345 3 751 1852 156 18 63 chr15 21775993 21776389 -81718585 - Lx LINE L1 -3 6651 6274 3 751 255 146 0 0 chr15 21776392 21776447 -81718527 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 751 964 58 14 7 chr15 21776447 21776587 -81718387 + (GGAGA)n Simple_repeat Simple_repeat 2 142 0 3 751 351 221 35 11 chr15 21776587 21776674 -81718300 - MTD LTR MaLR -330 89 1 3 751 27 0 0 0 chr15 21777469 21777496 -81717478 + AT_rich Low_complexity Low_complexity 1 27 0 3 751 518 313 90 10 chr15 21777855 21778032 -81716942 + B3 SINE B2 1 194 -22 3 751 249 33 0 0 chr15 21778032 21778062 -81716912 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 751 518 313 90 10 chr15 21778062 21778084 -81716890 + B3 SINE B2 195 216 0 3 751 24 0 0 0 chr15 21779349 21779373 -81715601 + AT_rich Low_complexity Low_complexity 1 24 0 3 751 354 23 0 0 chr15 21779751 21779794 -81715180 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 751 379 351 114 7 chr15 21779842 21779991 -81714983 + B3A SINE B2 1 165 -33 3 751 321 26 0 0 chr15 21779993 21780031 -81714943 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 751 491 108 11 0 chr15 21780031 21780124 -81714850 + (GA)n Simple_repeat Simple_repeat 1 94 0 3 751 10322 79 2 19 chr15 21780169 21781709 -81713265 - L1_Mm LINE L1 -2165 3718 2205 3 751 6573 15 0 0 chr15 21782517 21783259 -81711715 - L1Md_A LINE L1 0 6582 5841 3 751 4862 13 0 176 chr15 21783259 21783715 -81711259 + L1_Mm LINE L1 5131 5460 -423 3 751 8726 19 0 0 chr15 21783715 21784711 -81710263 + L1Md_A LINE L1 5587 6582 0 3 751 4862 13 0 176 chr15 21784711 21785089 -81709885 + L1_Mm LINE L1 5461 5818 -65 3 751 3855 181 27 4 chr15 21785788 21786564 -81708410 - Lx4A LINE L1 -219 5658 4865 3 751 1264 194 0 7 chr15 21786560 21786830 -81708144 + Lx4A LINE L1 5659 5926 -1132 3 751 217 146 62 0 chr15 21787174 21787222 -81707752 + T-rich Low_complexity Low_complexity 3 53 0 3 751 2409 100 55 9 chr15 21787333 21787676 -81707298 + RLTR10D LTR ERVK 1 359 0 3 751 15933 181 23 8 chr15 21787678 21790701 -81704273 + IAP-d-int LTR ERVK 3 3070 -3472 3 751 6279 82 14 2 chr15 21790702 21791605 -81703369 + L1Md_A LINE L1 236 1149 -5578 4 751 35549 18 3 8 chr15 21791605 21796781 -81698193 + L1Md_A LINE L1 440 5586 -297 4 751 8656 25 0 0 chr15 21796781 21797777 -81697197 + L1Md_A LINE L1 5587 6582 0 4 751 13458 40 0 0 chr15 21797777 21799651 -81695323 + L1Md_A LINE L1 997 2967 -2919 4 751 36276 31 0 0 chr15 21799655 21806313 -81688661 - L1Md_T LINE L1 0 6585 1 4 751 20989 29 1 1 chr15 21806313 21808948 -81686026 + L1Md_A LINE L1 2955 5589 -297 4 751 8009 47 2 4 chr15 21808948 21809944 -81685030 + L1Md_A LINE L1 5590 6583 -2 4 751 11667 200 8 3 chr15 21809947 21812276 -81682698 + IAP-d-int LTR ERVK 3056 5394 -1148 3 751 5341 108 0 15 chr15 21812315 21813116 -81681858 + IAP-d-int LTR ERVK 5394 6182 -360 3 751 2481 192 17 24 chr15 21813132 21813793 -81681181 + IAP-d-int LTR ERVK 5665 6542 0 3 751 2176 97 125 3 chr15 21813795 21814115 -81680859 + RLTR10D LTR ERVK 1 359 0 3 751 256 339 53 30 chr15 21815093 21815224 -81679750 - MER20 DNA MER1_type -61 158 25 4 751 239 202 67 9 chr15 21815345 21815450 -81679524 + (TA)n Simple_repeat Simple_repeat 2 112 0 4 751 23 0 0 0 chr15 21815595 21815618 -81679356 + AT_rich Low_complexity Low_complexity 1 23 0 4 751 289 198 128 37 chr15 21817355 21817472 -81677502 - Lx6 LINE L1 -70 7626 7566 4 751 232 102 0 0 chr15 21817458 21817507 -81677467 + L1Md_T LINE L1 6534 6582 0 4 751 4678 177 104 9 chr15 21817544 21818586 -81676388 + Lx3A LINE L1 5695 6835 -146 4 751 1820 228 15 43 chr15 21818586 21819076 -81675898 - Lx6 LINE L1 -203 7493 6760 4 751 2645 31 2 231 chr15 21819077 21819583 -81675391 + RLTR10 LTR ERVK 1 390 0 4 751 16190 21 1 13 chr15 21819593 21821561 -81673413 + RLTR10-int LTR ERVK 41 1984 -3 4 751 2645 31 2 231 chr15 21821563 21822069 -81672905 + RLTR10 LTR ERVK 1 390 0 4 751 1438 263 6 0 chr15 21822077 21822442 -81672532 - Lx6 LINE L1 -712 6748 6382 4 751 469 323 108 0 chr15 21822701 21822868 -81672106 - B3 SINE B2 -21 195 11 4 751 192 319 64 32 chr15 21823013 21823107 -81671867 - MIRb SINE MIR -145 123 27 4 751 635 62 21 0 chr15 21825327 21825423 -81669551 + (GTTTG)n Simple_repeat Simple_repeat 2 99 0 4 751 1103 56 21 7 chr15 21825423 21825558 -81669416 - B1_Mm SINE Alu -9 138 1 4 751 890 196 5 15 chr15 21826284 21826486 -81668488 + Lx9 LINE L1 7285 7484 -160 4 751 26 30 0 0 chr15 21826751 21826784 -81668190 + AT_rich Low_complexity Low_complexity 1 33 0 4 751 205 231 0 37 chr15 21826969 21827023 -81667951 + CT-rich Low_complexity Low_complexity 1 52 0 4 751 480 18 0 0 chr15 21827485 21827542 -81667432 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 751 336 94 0 0 chr15 21827843 21827896 -81667078 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 751 217 319 21 11 chr15 21827937 21828032 -81666942 + (CATATA)n Simple_repeat Simple_repeat 3 98 0 4 751 847 267 27 46 chr15 21828039 21828339 -81666635 - MT2B LTR ERVL -56 545 99 4 751 301 232 88 69 chr15 21828353 21828455 -81666519 - MT2B LTR ERVL -415 118 15 4 751 314 292 21 43 chr15 21828817 21829003 -81665971 - Lx8 LINE L1 -546 6927 6746 4 751 1233 101 0 0 chr15 21829004 21829183 -81665791 + (GAA)n Simple_repeat Simple_repeat 1 179 0 4 751 24 32 0 0 chr15 21829217 21829248 -81665726 + AT_rich Low_complexity Low_complexity 1 31 0 4 751 750 138 0 0 chr15 21829255 21829378 -81665596 + (GAAA)n Simple_repeat Simple_repeat 2 124 0 4 751 405 313 71 30 chr15 21829505 21829673 -81665301 - B3 SINE B2 -38 178 4 4 751 231 36 0 0 chr15 21829994 21830022 -81664952 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 4 751 297 411 68 14 chr15 21830260 21830408 -81664566 - B3A SINE B2 -30 168 13 4 751 4352 161 25 29 chr15 21830647 21830810 -81664164 - L1_Mur2 LINE L1 -3650 2227 2062 4 751 792 49 25 0 chr15 21830810 21830932 -81664042 + (TG)n Simple_repeat Simple_repeat 1 125 0 4 751 4352 171 47 28 chr15 21830932 21832151 -81662823 - L1_Mur2 LINE L1 -3816 2061 768 4 751 3479 47 21 0 chr15 21832144 21832604 -81662370 - L1Md_F2 LINE L1 -490 6092 5623 4 751 3641 53 19 8 chr15 21832604 21833082 -81661892 + L1Md_F2 LINE L1 6099 6581 -1 4 751 918 236 0 10 chr15 21833092 21833297 -81661677 - L1_Mur2 LINE L1 -6291 795 593 4 751 287 143 0 67 chr15 21833266 21833341 -81661633 - L1_Mur2 LINE L1 -6412 674 605 4 751 909 189 20 5 chr15 21834015 21834217 -81660757 - Lx2B LINE L1 -4 6996 6792 4 751 225 0 0 0 chr15 21835393 21835418 -81659556 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 751 5092 31 2 1 chr15 21835521 21836140 -81658834 - Lx2B LINE L1 -1718 5742 5122 4 751 5847 41 0 0 chr15 21836140 21836844 -81658130 + L1Md_T LINE L1 5879 6582 0 4 751 964 285 32 14 chr15 21836846 21837131 -81657843 - Lx6 LINE L1 -26 7434 7145 4 751 321 40 65 26 chr15 21837131 21837208 -81657766 + (CAAAAA)n Simple_repeat Simple_repeat 3 82 0 4 751 1371 257 88 44 chr15 21837208 21837619 -81657355 - Lx6 LINE L1 -311 7149 6721 4 751 31809 78 1 13 chr15 21839002 21844238 -81650736 + L1Md_F2 LINE L1 415 5586 -297 4 751 7548 46 43 1 chr15 21844239 21845184 -81649790 + L1Md_F2 LINE L1 5588 6572 -10 4 751 659 354 25 14 chr15 21845435 21845796 -81649178 - ORR1D2 LTR MaLR -1 369 5 4 751 24 32 0 0 chr15 21845977 21846008 -81648966 + AT_rich Low_complexity Low_complexity 1 31 0 4 751 302 326 54 7 chr15 21846233 21846381 -81648593 + MLT1A LTR MaLR 2 156 -218 4 751 206 62 0 30 chr15 21846596 21846629 -81648345 + (TTA)n Simple_repeat Simple_repeat 2 33 0 4 751 2098 238 63 22 chr15 21846813 21847367 -81647607 + Lx7 LINE L1 6742 7318 -378 4 751 2474 97 118 39 chr15 21847390 21847830 -81647144 - IAPLTR2_Mm LTR ERVK 0 475 1 4 751 56555 23 5 4 chr15 21847830 21854298 -81640676 - IAPEz-int LTR ERVK 0 6481 9 4 751 2442 102 121 41 chr15 21854299 21854739 -81640235 - IAPLTR2_Mm LTR ERVK 0 475 1 4 751 392 0 0 20 chr15 21854810 21854859 -81640115 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 751 363 202 0 0 chr15 21855248 21855327 -81639647 + (TA)n Simple_repeat Simple_repeat 2 80 0 4 751 344 257 40 96 chr15 21855580 21855705 -81639269 + RCHARR1 DNA MER1_type 331 448 -526 4 751 536 104 102 20 chr15 21855705 21855803 -81639171 - L1_Mus1 LINE L1 -2 6565 6460 4 751 6000 263 62 32 chr15 21856234 21858446 -81636528 + MurERV4-int LTR ERVK 1 2336 -2924 4 751 3198 211 23 27 chr15 21858450 21859187 -81635787 + MurERV4-int LTR ERVK 4447 5180 -80 4 751 1474 176 36 29 chr15 21859618 21859712 -81635262 + RLTR31A_Mm LTR ERVK 1 88 -496 4 751 450 0 0 0 chr15 21859712 21859762 -81635212 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 751 1474 176 36 29 chr15 21859762 21859948 -81635026 + RLTR31A_Mm LTR ERVK 89 282 -302 4 751 555 118 0 0 chr15 21859950 21860035 -81634939 + (GGAA)n Simple_repeat Simple_repeat 3 87 0 4 751 833 229 12 66 chr15 21860254 21860497 -81634477 + L1_Mur2 LINE L1 4683 4912 -965 4 751 21 0 0 0 chr15 21861135 21861156 -81633818 + AT_rich Low_complexity Low_complexity 1 21 0 4 751 8096 46 3 0 chr15 21861264 21862289 -81632685 - L1Md_F2 LINE L1 -12 6570 5543 4 751 528 93 0 0 chr15 21862498 21862573 -81632401 + (GAAA)n Simple_repeat Simple_repeat 1 75 0 4 751 549 319 24 24 chr15 21862603 21862812 -81632162 + MTD LTR MaLR 40 248 -171 4 751 24 77 0 0 chr15 21862983 21863035 -81631939 + AT_rich Low_complexity Low_complexity 1 52 0 4 751 28 29 0 0 chr15 21863499 21863534 -81631440 + AT_rich Low_complexity Low_complexity 1 35 0 4 751 433 259 27 7 chr15 21864019 21864167 -81630807 - L1_Mur3 LINE L1 -768 5112 4962 4 751 253 316 46 96 chr15 21864198 21864523 -81630451 - L1M3 LINE L1 -684 5163 4858 4 751 4725 95 3 0 chr15 21865836 21866497 -81628477 - L1_Mm LINE L1 -83 5800 5138 4 751 3058 63 0 17 chr15 21866499 21866903 -81628071 + L1_Mus1 LINE L1 6171 6567 0 4 751 180 0 0 0 chr15 21866906 21866926 -81628048 + (TAAAAA)n Simple_repeat Simple_repeat 4 23 0 4 751 426 20 0 0 chr15 21867495 21867546 -81627428 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 751 348 24 0 0 chr15 21867546 21867586 -81627388 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 751 3367 109 19 2 chr15 21868229 21868742 -81626232 - L1_Mus4 LINE L1 0 6636 6115 4 751 1898 186 48 143 chr15 21868865 21869510 -81625464 - RLTR31A_Mm LTR ERVK 0 584 1 4 751 22 0 0 0 chr15 21869652 21869674 -81625300 + AT_rich Low_complexity Low_complexity 1 22 0 4 751 3097 211 39 14 chr15 21869821 21870540 -81624434 - RMER19A LTR ERVK 0 737 1 4 751 27 29 0 0 chr15 21870690 21870724 -81624250 + AT_rich Low_complexity Low_complexity 1 34 0 4 751 727 186 27 27 chr15 21872167 21872307 -81622667 + ORR1B1 LTR MaLR 1 144 -250 4 751 423 0 0 0 chr15 21872307 21872354 -81622620 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 751 1206 212 31 176 chr15 21872354 21872633 -81622341 + ORR1B1 LTR MaLR 135 386 -8 4 751 23 0 0 0 chr15 21873342 21873365 -81621609 + AT_rich Low_complexity Low_complexity 1 23 0 4 751 17929 15 0 0 chr15 21874351 21877102 -81617872 - L1Md_A LINE L1 0 6582 3832 4 751 186 43 0 0 chr15 21877486 21877509 -81617465 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 751 372 43 0 0 chr15 21877555 21877601 -81617373 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 751 261 151 0 0 chr15 21877657 21877710 -81617264 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 751 468 48 0 0 chr15 21877713 21877776 -81617198 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 4 751 742 302 77 32 chr15 21877784 21878215 -81616759 - Lx9 LINE L1 -242 7402 6953 4 751 27 62 0 0 chr15 21878216 21878264 -81616710 + AT_rich Low_complexity Low_complexity 1 48 0 4 751 263 264 0 0 chr15 21878365 21878437 -81616537 + T-rich Low_complexity Low_complexity 1 72 0 4 751 2709 297 68 49 chr15 21878440 21879930 -81615044 - RMER1C Other Other 0 1342 174 4 751 3163 207 19 8 chr15 21880129 21880797 -81614177 - RLTR33 LTR ERVK -2 676 1 4 751 190 95 0 45 chr15 21882201 21882245 -81612729 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 4 751 1145 95 18 0 chr15 21882472 21882640 -81612334 + L1_Mus4 LINE L1 5851 6021 -615 4 751 2034 122 38 11 chr15 21882640 21882987 -81611987 + Lx LINE L1 6285 6640 -14 4 751 1027 220 98 85 chr15 21882987 21883595 -81611379 - RMER6A LTR ERVK -59 697 2 4 751 1176 204 104 60 chr15 21883595 21883980 -81610994 + RMER17C LTR ERVK 1 402 -8 4 751 180 135 0 0 chr15 21884001 21884038 -81610936 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 751 369 226 32 0 chr15 21884288 21884381 -81610593 + Lx7 LINE L1 5588 5683 -2013 4 751 1942 115 41 32 chr15 21884415 21884757 -81610217 - Lx LINE L1 -1 6653 6309 4 751 1152 237 7 11 chr15 21884758 21885039 -81609935 + Lx6 LINE L1 5664 5943 -1517 4 751 317 77 39 0 chr15 21885967 21886019 -81608955 + (TTTTC)n Simple_repeat Simple_repeat 1 54 0 4 751 1939 160 86 0 chr15 21886024 21886406 -81608568 - Lx3C LINE L1 -2 6974 6560 4 751 6109 181 14 7 chr15 21886406 21887145 -81607829 - L1_Mur2 LINE L1 -457 5420 4674 4 751 416 108 0 98 chr15 21887145 21887237 -81607737 - L1_Mus2 LINE L1 0 6566 6484 4 751 6109 181 14 7 chr15 21887237 21887673 -81607301 - L1_Mur2 LINE L1 -1204 4673 4236 4 751 2491 116 0 3 chr15 21887678 21888042 -81606932 + L1_Mm LINE L1 5434 5796 -87 4 751 237 98 24 0 chr15 21888148 21888189 -81606785 - MT2C_Mm LTR ERVL -78 397 356 4 93 850 304 79 22 chr15 21888986 21889353 -81605621 + MER89 LTR ERV1 167 554 -5 4 752 273 75 0 0 chr15 21889558 21889598 -81605376 + (A)n Simple_repeat Simple_repeat 1 40 0 4 752 1424 111 34 4 chr15 21889598 21889833 -81605141 + Lx LINE L1 5783 6016 -984 5 752 303 270 71 18 chr15 21889899 21890012 -81604962 + HAL1-3A_ME LINE L1 1975 2093 -765 5 752 203 297 0 0 chr15 21891090 21891154 -81603820 + CT-rich Low_complexity Low_complexity 2 65 0 5 752 2891 161 84 65 chr15 21891215 21891892 -81603082 - RMER6C LTR ERVK 0 690 1 5 752 945 316 20 121 chr15 21893298 21893751 -81601223 - MTD LTR MaLR -12 407 1 5 752 247 309 29 0 chr15 21894166 21894234 -81600740 + ID4 SINE ID 14 83 0 5 752 3732 97 17 0 chr15 21894883 21895410 -81599564 - L1_Mus3 LINE L1 -6 6632 6097 5 752 250 327 61 48 chr15 21895435 21895663 -81599311 - Tigger7 DNA MER2_type -309 2182 1952 5 752 21 57 0 0 chr15 21895700 21895735 -81599239 + AT_rich Low_complexity Low_complexity 1 35 0 5 752 342 0 0 0 chr15 21895938 21895976 -81598998 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 752 2731 28 0 3 chr15 21896035 21896358 -81598616 + RLTRETN_Mm LTR ERVK 1 322 0 5 752 352 340 9 0 chr15 21896358 21896464 -81598510 - RSINE1 SINE B4 -55 110 4 5 752 258 105 0 0 chr15 21896837 21896875 -81598099 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 752 198 0 0 0 chr15 21896875 21896897 -81598077 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 752 805 168 17 8 chr15 21896970 21897210 -81597764 + (TATG)n Simple_repeat Simple_repeat 1 242 0 5 752 233 300 276 15 chr15 21897239 21897442 -81597532 - Tigger7 DNA MER2_type -1713 778 523 5 752 218 352 65 11 chr15 21897445 21897537 -81597437 + RSINE1 SINE B4 38 134 -31 5 752 364 281 34 7 chr15 21897618 21897765 -81597209 + Lx9 LINE L1 7316 7466 -178 5 752 213 135 27 0 chr15 21897767 21897804 -81597170 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 752 23 0 0 0 chr15 21899283 21899306 -81595668 + AT_rich Low_complexity Low_complexity 1 23 0 5 752 586 210 113 5 chr15 21900264 21900484 -81594490 + Lx7 LINE L1 7319 7690 -6 5 752 706 49 0 75 chr15 21900491 21900624 -81594350 + (GGAGA)n Simple_repeat Simple_repeat 4 126 0 5 752 305 347 53 20 chr15 21900624 21900774 -81594200 + HAL1-3A_ME LINE L1 2284 2438 -420 5 752 843 58 0 95 chr15 21900811 21901001 -81593973 + GA-rich Low_complexity Low_complexity 5 176 0 5 752 499 296 66 4 chr15 21901592 21901819 -81593155 + Lx9 LINE L1 7237 7477 -167 5 752 447 35 0 0 chr15 21901819 21901876 -81593098 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 752 1201 55 0 0 chr15 21902173 21902318 -81592656 + B1_Mus2 SINE Alu 3 147 0 5 752 4989 235 31 11 chr15 21902453 21903800 -81591174 - Lx7 LINE L1 -787 6909 5526 5 752 288 111 0 0 chr15 21904008 21904053 -81590921 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 5 752 24 0 0 0 chr15 21904578 21904602 -81590372 + AT_rich Low_complexity Low_complexity 1 24 0 5 752 613 216 151 0 chr15 21905862 21906047 -81588927 - ORR1C2 LTR MaLR 0 384 172 5 752 410 272 48 0 chr15 21906094 21906197 -81588777 - ORR1C2 LTR MaLR -190 194 87 5 752 2161 270 48 40 chr15 21906280 21906990 -81587984 - RMER1C Other Other 0 1342 638 5 752 257 259 12 58 chr15 21907718 21907799 -81587175 - B1_Mur4 SINE Alu -19 131 55 5 752 2542 86 43 20 chr15 21907799 21908018 -81586956 - MTB LTR MaLR 0 400 183 5 752 4078 47 6 6 chr15 21908018 21908528 -81586446 - L1Md_F2 LINE L1 0 6582 6073 5 752 2542 86 43 20 chr15 21908528 21908684 -81586290 - MTB LTR MaLR -218 182 25 5 752 378 0 0 0 chr15 21908684 21908726 -81586248 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 752 2542 86 43 20 chr15 21908726 21908740 -81586234 - MTB LTR MaLR -376 24 3 5 752 279 79 0 0 chr15 21911118 21911156 -81583818 + (TTA)n Simple_repeat Simple_repeat 2 39 0 5 752 389 355 0 6 chr15 21911359 21911526 -81583448 - Lx8 LINE L1 -339 7134 6969 5 752 25 31 0 0 chr15 21912018 21912050 -81582924 + AT_rich Low_complexity Low_complexity 1 32 0 5 752 300 200 0 0 chr15 21912158 21912228 -81582746 + (TA)n Simple_repeat Simple_repeat 1 70 0 5 752 34 24 0 0 chr15 21912234 21912275 -81582699 + AT_rich Low_complexity Low_complexity 1 41 0 5 752 5524 77 9 19 chr15 21912440 21913209 -81581765 + L1_Mus1 LINE L1 5807 6567 0 5 752 456 19 0 0 chr15 21913213 21913266 -81581708 + (TA)n Simple_repeat Simple_repeat 1 53 0 5 752 454 334 89 31 chr15 21913271 21913595 -81581379 + Lx7 LINE L1 6577 6919 -777 5 752 486 103 0 0 chr15 21913841 21913919 -81581055 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 752 206 227 0 0 chr15 21914674 21914718 -81580256 + GA-rich Low_complexity Low_complexity 3 46 0 5 752 342 0 0 0 chr15 21915048 21915086 -81579888 + (TC)n Simple_repeat Simple_repeat 2 39 0 5 752 309 301 103 22 chr15 21915221 21915357 -81579617 - RMER15 LTR ERVL 0 575 429 5 752 452 302 67 42 chr15 21915583 21915839 -81579135 + MT2B LTR ERVL 138 532 -69 5 752 1051 67 7 7 chr15 21915858 21916008 -81578966 + (TTC)n Simple_repeat Simple_repeat 1 150 0 5 752 232 247 20 30 chr15 21916012 21916112 -81578862 + C-rich Low_complexity Low_complexity 1 99 0 5 752 376 297 8 24 chr15 21916127 21916387 -81578587 + CT-rich Low_complexity Low_complexity 1 255 0 5 752 302 347 48 26 chr15 21917052 21917280 -81577694 - Lx9 LINE L1 -220 7424 7192 5 752 749 208 12 12 chr15 21917280 21917441 -81577533 + ORR1C2 LTR MaLR 6 166 -218 5 752 888 19 0 0 chr15 21917448 21917554 -81577420 + (TC)n Simple_repeat Simple_repeat 1 106 0 5 752 261 0 0 0 chr15 21917554 21917582 -81577392 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 752 417 20 0 0 chr15 21917868 21917918 -81577056 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 752 348 378 21 45 chr15 21918297 21918632 -81576342 + LTR86C LTR ERVL 19 345 -276 5 752 433 305 15 45 chr15 21918682 21918816 -81576158 - RMER15 LTR ERVL 0 575 446 5 752 241 157 0 38 chr15 21918861 21918914 -81576060 - ORR1D1 LTR MaLR -228 146 96 5 752 235 269 32 32 chr15 21918924 21919047 -81575927 - RMER15 LTR ERVL -166 409 287 5 752 339 25 0 0 chr15 21919788 21919828 -81575146 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 752 507 56 0 0 chr15 21919830 21919901 -81575073 + (GA)n Simple_repeat Simple_repeat 2 72 0 5 752 221 242 16 0 chr15 21919904 21919966 -81575008 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 752 216 97 0 0 chr15 21919969 21920000 -81574974 + (TAAAA)n Simple_repeat Simple_repeat 5 35 0 5 752 21 36 0 0 chr15 21920930 21920958 -81574016 + AT_rich Low_complexity Low_complexity 1 28 0 5 752 24 0 0 0 chr15 21921261 21921285 -81573689 + AT_rich Low_complexity Low_complexity 1 24 0 5 752 615 313 58 26 chr15 21921298 21921679 -81573295 + Charlie2b DNA MER1_type 1750 2142 -640 5 752 609 14 0 0 chr15 21921737 21921807 -81573167 + (TA)n Simple_repeat Simple_repeat 2 71 0 5 752 567 330 57 0 chr15 21922444 21922638 -81572336 + RMER1B Other Other 7 211 -855 5 752 2898 265 127 45 chr15 21922626 21924162 -81570812 + RMER1A Other Other 1 914 -116 5 752 516 16 0 0 chr15 21924162 21924223 -81570751 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 752 2898 233 199 45 chr15 21924223 21924324 -81570650 + RMER1A Other Other 915 1020 -10 5 752 255 177 0 0 chr15 21925796 21925858 -81569116 + (CAGA)n Simple_repeat Simple_repeat 3 64 0 5 752 1188 281 19 32 chr15 21926277 21926652 -81568322 + ORR1D1 LTR MaLR 5 374 0 5 752 298 333 0 9 chr15 21926908 21927017 -81567957 - MLT1A1 LTR MaLR -281 127 20 5 752 33 25 0 0 chr15 21927769 21927809 -81567165 + AT_rich Low_complexity Low_complexity 1 40 0 5 752 250 400 23 39 chr15 21927894 21928024 -81566950 - RSINE1 SINE B4 -26 139 12 5 752 816 352 30 31 chr15 21928061 21928437 -81566537 - MTE2a LTR MaLR -23 396 31 5 752 261 0 0 0 chr15 21928658 21928687 -81566287 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 5 752 4921 151 69 16 chr15 21929468 21930378 -81564596 - RMER17B LTR ERVK 0 958 1 5 752 447 19 0 0 chr15 21930573 21930625 -81564349 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 752 27 49 0 0 chr15 21930745 21930786 -81564188 + AT_rich Low_complexity Low_complexity 1 41 0 5 752 522 211 0 0 chr15 21930791 21930905 -81564069 + (TA)n Simple_repeat Simple_repeat 1 114 0 5 752 406 377 54 25 chr15 21931203 21931335 -81563639 + MTE2a LTR MaLR 77 218 -161 5 752 513 0 0 0 chr15 21931335 21931392 -81563582 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 752 406 377 54 25 chr15 21931392 21931501 -81563473 + MTE2a LTR MaLR 219 325 -54 5 752 33750 78 3 1 chr15 21931772 21937950 -81557024 - L1Md_F2 LINE L1 0 6582 394 5 752 1943 30 0 4 chr15 21938186 21938451 -81556523 - L1Md_F2 LINE L1 0 6582 6346 5 752 25 0 0 0 chr15 21938504 21938529 -81556445 + AT_rich Low_complexity Low_complexity 1 25 0 5 752 703 201 73 7 chr15 21938940 21939090 -81555884 - ORR1C2 LTR MaLR -23 361 202 5 752 33 0 0 0 chr15 21939092 21939125 -81555849 + AT_rich Low_complexity Low_complexity 1 33 0 5 752 1282 175 39 43 chr15 21939134 21939391 -81555583 - Lx3B LINE L1 -2 6971 6716 5 752 968 168 89 0 chr15 21939391 21939581 -81555393 - ORR1C2 LTR MaLR -177 207 1 5 752 246 116 0 0 chr15 21939946 21939989 -81554985 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 752 365 0 0 22 chr15 21940076 21940122 -81554852 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 5 752 35 0 0 0 chr15 21940446 21940481 -81554493 + AT_rich Low_complexity Low_complexity 1 35 0 5 752 610 148 118 14 chr15 21940666 21940810 -81554164 - RMER17B LTR ERVK -493 465 307 5 752 1460 303 48 19 chr15 21940936 21941454 -81553520 + RMER5 LTR ERV1 1 533 -1 5 752 23 33 0 0 chr15 21941456 21941486 -81553488 + AT_rich Low_complexity Low_complexity 1 30 0 5 752 3128 26 56 15 chr15 21942215 21942610 -81552364 - IAPLTR2a LTR ERVK 0 411 1 5 752 278 261 92 0 chr15 21942759 21942824 -81552150 + B3 SINE B2 4 74 -142 5 752 2502 182 17 34 chr15 21942878 21943384 -81551590 + RLTR1D LTR ERV1 107 605 0 5 752 845 329 56 31 chr15 21945208 21945566 -81549408 + MTD LTR MaLR 39 405 -14 5 752 1093 92 21 47 chr15 21945703 21945896 -81549078 + L1_Mus3 LINE L1 6451 6638 0 5 752 948 278 58 24 chr15 21946080 21946408 -81548566 + ORR1E LTR MaLR 11 349 -10 5 752 22 0 0 0 chr15 21946604 21946626 -81548348 + AT_rich Low_complexity Low_complexity 1 22 0 6 752 350 335 76 23 chr15 21946704 21946989 -81547985 - MLT2C1 LTR ERVL -78 336 27 6 752 30 45 0 0 chr15 21947036 21947080 -81547894 + AT_rich Low_complexity Low_complexity 1 44 0 6 752 233 200 0 22 chr15 21947268 21947314 -81547660 + B4A SINE B4 188 232 -60 6 752 3165 261 46 52 chr15 21947502 21948780 -81546194 + Lx6 LINE L1 5450 6732 -728 6 752 396 0 0 0 chr15 21948789 21948833 -81546141 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 752 1796 262 134 9 chr15 21948849 21949403 -81545571 + Lx6 LINE L1 6827 7449 -11 6 752 230 330 10 21 chr15 21951677 21951773 -81543201 + (TCTCTG)n Simple_repeat Simple_repeat 4 98 0 6 752 246 167 73 29 chr15 21951871 21951939 -81543035 + L1_Mur2 LINE L1 4208 4278 -1602 6 752 1350 121 0 0 chr15 21951937 21952136 -81542838 - L1_Mm LINE L1 -695 5188 4990 6 752 709 168 6 63 chr15 21952136 21952295 -81542679 + L1_Mur2 LINE L1 4807 4956 -921 6 752 580 197 29 14 chr15 21952348 21952487 -81542487 + L1Md_F LINE L1 675 815 -5801 6 752 4674 124 6 91 chr15 21952502 21953461 -81541513 + L1Md_F LINE L1 1236 2113 -3770 6 752 4147 117 32 0 chr15 21953458 21954083 -81540891 + L1Md_F LINE L1 5239 5883 0 6 752 2932 53 45 3 chr15 21954100 21954480 -81540494 - MTA_Mm LTR MaLR 0 396 1 6 752 6716 69 21 2 chr15 21954480 21955410 -81539564 - MTA_Mm-int LTR MaLR 0 1098 151 6 752 215 41 82 0 chr15 21955410 21955459 -81539515 + (CAA)n Simple_repeat Simple_repeat 1 53 0 6 752 27 0 0 0 chr15 21955466 21955493 -81539481 + AT_rich Low_complexity Low_complexity 1 27 0 6 752 503 153 35 55 chr15 21956722 21956867 -81538107 + Lx3A LINE L1 6837 6978 -3 6 752 1029 101 0 0 chr15 21956868 21957007 -81537967 + B1_Mus1 SINE Alu 1 139 -9 6 752 415 0 0 35 chr15 21957014 21957071 -81537903 + (TAA)n Simple_repeat Simple_repeat 3 57 0 6 752 378 0 0 0 chr15 21957285 21957327 -81537647 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 6 752 180 152 0 0 chr15 21957570 21957603 -81537371 + (TA)n Simple_repeat Simple_repeat 1 33 0 6 752 281 246 0 48 chr15 21958561 21958749 -81536225 + (TA)n Simple_repeat Simple_repeat 2 180 0 6 752 22 35 0 0 chr15 21960935 21960964 -81534010 + AT_rich Low_complexity Low_complexity 1 29 0 6 752 449 244 6 38 chr15 21961060 21961218 -81533756 + Lx9 LINE L1 7481 7633 -11 6 752 48 32 0 0 chr15 21961218 21961280 -81533694 + AT_rich Low_complexity Low_complexity 1 62 0 6 752 496 293 68 74 chr15 21961443 21961985 -81532989 - L1MC LINE L1 -1906 4240 3702 6 752 375 377 0 0 chr15 21962770 21962884 -81532090 + RSINE1 SINE B4 9 122 -43 6 752 552 130 0 0 chr15 21962947 21963024 -81531950 - Lx LINE L1 -384 6270 6194 6 752 2077 149 73 3 chr15 21963024 21963381 -81531593 + Lx LINE L1 6271 6652 -2 6 752 329 280 12 85 chr15 21963462 21963631 -81531343 - Lx9 LINE L1 -12 7632 7481 6 752 288 77 0 0 chr15 21963631 21963670 -81531304 + (TATG)n Simple_repeat Simple_repeat 1 39 0 6 752 329 280 12 85 chr15 21963670 21963746 -81531228 - Lx9 LINE L1 -164 7480 7405 6 752 22 0 0 0 chr15 21964005 21964027 -81530947 + AT_rich Low_complexity Low_complexity 1 22 0 6 752 291 416 46 14 chr15 21964308 21964593 -81530381 + L2 LINE L2 290 583 -2836 6 752 1364 335 16 22 chr15 21964700 21965250 -81529724 - Lx6 LINE L1 0 7460 6914 6 752 305 203 0 15 chr15 21965309 21965374 -81529600 + Lx2B LINE L1 5796 5859 -1141 6 752 614 226 60 9 chr15 21965355 21965541 -81529433 - Lx6 LINE L1 -740 6956 6742 6 752 3542 189 45 10 chr15 21965547 21966251 -81528723 - Lx4A LINE L1 -3 7055 6327 6 752 253 98 0 62 chr15 21966393 21966458 -81528516 + (TCTCTG)n Simple_repeat Simple_repeat 3 63 0 6 752 333 0 0 0 chr15 21966466 21966503 -81528471 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 752 713 220 95 11 chr15 21966691 21966970 -81528004 - Lx6 LINE L1 -377 5923 5661 6 752 261 293 100 62 chr15 21966975 21967135 -81527839 + MLT1C LTR MaLR 289 454 -13 6 752 414 0 0 0 chr15 21967341 21967387 -81527587 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 752 2452 72 9 6 chr15 21967912 21968248 -81526726 + L1Md_F2 LINE L1 6245 6581 -1 6 752 2482 81 28 3 chr15 21968334 21968691 -81526283 + L1Md_F2 LINE L1 6217 6582 0 6 752 24 77 0 0 chr15 21969307 21969359 -81525615 + AT_rich Low_complexity Low_complexity 1 52 0 6 752 236 273 45 15 chr15 21969599 21969666 -81525308 + MER110 LTR ERV1 325 393 -98 6 752 2564 113 19 22 chr15 21969961 21970376 -81524598 - Lx2 LINE L1 0 6997 6584 6 752 2700 63 68 0 chr15 21970712 21971078 -81523896 - L1Md_F2 LINE L1 0 6582 6192 6 752 342 0 0 0 chr15 21971167 21971205 -81523769 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 752 770 287 53 41 chr15 21971993 21972331 -81522643 + RMER5 LTR ERV1 33 374 -160 6 752 9258 94 17 8 chr15 21972359 21974546 -81520428 - Lx3_Mus LINE L1 0 7009 4797 6 752 25 0 0 0 chr15 21974546 21974571 -81520403 + AT_rich Low_complexity Low_complexity 1 25 0 6 752 250 305 103 21 chr15 21974593 21974690 -81520284 + RMER5 LTR ERV1 428 532 -2 6 752 417 300 26 17 chr15 21975530 21975761 -81519213 - L1_Rod LINE L1 -3180 2667 2435 6 752 236 178 40 27 chr15 21975761 21975836 -81519138 + (TTATA)n Simple_repeat Simple_repeat 2 77 0 6 752 350 299 87 36 chr15 21975894 21976113 -81518861 - L1_Rod LINE L1 -3655 2192 1963 6 752 797 111 47 34 chr15 21977004 21977153 -81517821 - RLTR10A LTR ERVK -144 267 117 6 752 1785 60 9 0 chr15 21979274 21979506 -81515468 + L1Md_A LINE L1 6347 6580 -2 6 752 22 70 0 0 chr15 21979874 21979917 -81515057 + AT_rich Low_complexity Low_complexity 1 43 0 6 752 545 341 6 12 chr15 21979957 21980126 -81514848 + B3A SINE B2 1 168 -30 6 752 1208 96 9 0 chr15 21981275 21981605 -81513369 + (TCTA)n Simple_repeat Simple_repeat 1 333 0 6 752 301 294 78 10 chr15 21981812 21981915 -81513059 + B1_Mur2 SINE Alu 23 132 -17 6 752 297 51 0 0 chr15 21981920 21981959 -81513015 + (GA)n Simple_repeat Simple_repeat 1 39 0 6 752 247 338 24 24 chr15 21982087 21982169 -81512805 + RSINE1 SINE B4 51 132 -33 6 752 2378 252 68 36 chr15 21983241 21983936 -81511038 - Lx6 LINE L1 -3 7457 6741 6 752 341 43 21 0 chr15 21983936 21983983 -81510991 + (TTTC)n Simple_repeat Simple_repeat 2 49 0 6 752 234 167 104 0 chr15 21984006 21984054 -81510920 - Lx6 LINE L1 -734 6726 6674 6 752 188 283 82 52 chr15 21984139 21984236 -81510738 + MER5B DNA MER1_type 2 101 -77 6 752 440 228 35 9 chr15 21984565 21984680 -81510294 + Lx3C LINE L1 6857 6974 -2 6 752 186 143 0 0 chr15 21984683 21984718 -81510256 + (TAA)n Simple_repeat Simple_repeat 3 37 0 6 752 397 89 18 0 chr15 21984782 21984838 -81510136 - IAPEz-int LTR ERVK -6257 224 168 6 752 244 302 0 0 chr15 21984838 21984891 -81510083 - RLTR27 LTR ERVK -34 275 223 6 752 913 123 27 90 chr15 21984891 21985079 -81509895 - IAPEz-int LTR ERVK -6286 195 20 6 752 2494 89 76 33 chr15 21985144 21985538 -81509436 - IAPLTR2a LTR ERVK 0 411 1 6 752 1047 295 46 33 chr15 21986099 21986467 -81508507 + ORR1D1 LTR MaLR 1 373 -1 6 752 569 217 96 5 chr15 21986469 21986668 -81508306 + Lx9 LINE L1 7423 7639 -5 6 752 30 0 0 0 chr15 21986670 21986700 -81508274 + AT_rich Low_complexity Low_complexity 1 30 0 6 752 32 26 0 0 chr15 21986784 21986823 -81508151 + AT_rich Low_complexity Low_complexity 1 39 0 6 752 6458 38 4 0 chr15 21986823 21987597 -81507377 - L1Md_F2 LINE L1 -3 6579 5803 6 752 262 29 29 0 chr15 21987598 21987633 -81507341 + L1Md_F LINE L1 125 160 -6359 6 752 7158 176 17 25 chr15 21987639 21989547 -81505427 - Lx3C LINE L1 -4 6972 5083 6 752 981 195 0 5 chr15 21989546 21989742 -81505232 + Lx3C LINE L1 4891 5085 -801 6 752 24 0 0 0 chr15 21989765 21989789 -81505185 + AT_rich Low_complexity Low_complexity 1 24 0 6 752 387 0 0 0 chr15 21990436 21990479 -81504495 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 752 27 29 0 0 chr15 21992152 21992186 -81502788 + AT_rich Low_complexity Low_complexity 1 34 0 6 752 361 207 49 12 chr15 21992223 21992385 -81502589 - ORR1D1 LTR MaLR 0 374 171 6 752 237 159 0 0 chr15 21992422 21992466 -81502508 + GA-rich Low_complexity Low_complexity 1 44 0 6 752 650 291 0 32 chr15 21992466 21992651 -81502323 - ORR1D1 LTR MaLR -193 181 3 6 752 513 287 22 1 chr15 21993029 21993185 -81501789 - Lx7 LINE L1 -789 6684 6522 6 752 1018 121 102 34 chr15 21993211 21993416 -81501558 - Lx LINE L1 -7 6647 6429 6 752 654 306 42 23 chr15 21993426 21993690 -81501284 - Lx7 LINE L1 -1167 6529 6261 6 752 587 311 169 19 chr15 21993758 21994171 -81500803 + Lx7 LINE L1 6847 7321 -375 6 752 22 103 0 0 chr15 21994501 21994579 -81500395 + AT_rich Low_complexity Low_complexity 1 78 0 6 752 2591 103 55 5 chr15 21996369 21996770 -81498204 - BGLII LTR ERVK 0 421 1 6 752 25 0 0 0 chr15 21997000 21997025 -81497949 + AT_rich Low_complexity Low_complexity 1 25 0 6 752 23 33 0 0 chr15 21997271 21997301 -81497673 + AT_rich Low_complexity Low_complexity 1 30 0 6 752 16121 22 0 0 chr15 21997436 22000000 -81494974 - L1Md_T LINE L1 0 6582 4018 6 752 14179 28 0 0 chr15 22000000 22001699 -81493275 - L1_Mm LINE L1 -1866 4017 2319 1 752 2006 48 0 8 chr15 22002190 22002445 -81492529 + L1Md_F3 LINE L1 6318 6570 -14 2 752 778 54 18 0 chr15 22002857 22002969 -81492005 + (TCTA)n Simple_repeat Simple_repeat 1 114 0 3 752 366 206 14 14 chr15 22002975 22003049 -81491925 - RSINE1 SINE B4 -1 164 91 4 752 29 94 0 0 chr15 22003061 22003146 -81491828 + AT_rich Low_complexity Low_complexity 1 85 0 5 752 24 67 0 0 chr15 22003299 22003344 -81491630 + AT_rich Low_complexity Low_complexity 1 45 0 6 752 8730 144 27 12 chr15 22003590 22005288 -81489686 - Lx4A LINE L1 -2 7056 5340 7 752 526 256 104 0 chr15 22005303 22005514 -81489460 + L1_Mur2 LINE L1 102 334 -6378 8 752 24 67 0 0 chr15 22007580 22007625 -81487349 + AT_rich Low_complexity Low_complexity 1 45 0 9 752 403 311 45 5 chr15 22007703 22007926 -81487048 - L1_Mur3 LINE L1 -433 5447 5216 1 752 1249 105 15 35 chr15 22008057 22008254 -81486720 + B2_Mm2 SINE B2 1 193 -2 1 752 23 68 0 0 chr15 22008591 22008635 -81486339 + AT_rich Low_complexity Low_complexity 1 44 0 1 752 1075 57 12 71 chr15 22008969 22009139 -81485835 - L1Md_F2 LINE L1 -9 6573 6414 1 752 1545 150 15 166 chr15 22009222 22009615 -81485359 + ORR1B1 LTR MaLR 1 386 -8 1 752 41 0 0 0 chr15 22009775 22009816 -81485158 + AT_rich Low_complexity Low_complexity 1 41 0 1 752 419 52 17 0 chr15 22009908 22009966 -81485008 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 752 181 0 0 65 chr15 22010264 22010295 -81484679 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 1 752 258 309 0 0 chr15 22010343 22010437 -81484537 - L1MA5 LINE L1 -32 6268 6175 1 752 298 256 27 74 chr15 22010457 22010605 -81484369 - Lx7 LINE L1 0 7696 7556 1 752 409 307 73 0 chr15 22011516 22011666 -81483308 + MER54A LTR ERVL 680 840 -61 2 752 297 400 9 0 chr15 22011709 22011824 -81483150 + RSINE1 SINE B4 10 125 -40 2 752 4669 116 3 20 chr15 22011849 22012601 -81482373 + L1_Mus3 LINE L1 5922 6638 0 2 752 1161 118 0 0 chr15 22012601 22012779 -81482195 + (GGAAA)n Simple_repeat Simple_repeat 3 180 0 2 752 280 200 34 34 chr15 22012829 22012917 -81482057 - Lx8 LINE L1 -1260 6213 6126 2 752 839 348 53 17 chr15 22013218 22013742 -81481232 + Lx8 LINE L1 6799 7341 -132 2 752 3024 56 201 2 chr15 22013895 22014322 -81480652 - RLTR1B LTR ERV1 0 512 1 2 752 256 269 12 71 chr15 22014649 22014733 -81480241 + RLTR40 LTR ERVK 25 103 -714 2 752 558 281 47 60 chr15 22014715 22014950 -81480024 + RLTR40 LTR ERVK 269 500 -317 2 752 1571 241 83 44 chr15 22014950 22015445 -81479529 + RLTR31A_Mm LTR ERVK 1 514 -70 2 752 1210 249 49 7 chr15 22015470 22015777 -81479197 + RLTR40 LTR ERVK 494 813 -4 2 752 21 57 0 0 chr15 22015841 22015876 -81479098 + AT_rich Low_complexity Low_complexity 1 35 0 2 752 4073 147 15 10 chr15 22015877 22016563 -81478411 - Lx3C LINE L1 -3 6973 6285 3 752 1693 166 76 43 chr15 22016702 22017098 -81477876 + RLTR9E LTR ERVK 1 409 0 3 752 301 261 90 11 chr15 22017487 22017576 -81477398 + MLT1D LTR MaLR 402 497 -8 3 752 2687 70 6 0 chr15 22017653 22017997 -81476977 + ORR1A1 LTR MaLR 1 346 0 3 752 286 28 0 0 chr15 22018083 22018119 -81476855 - L1_Mus2 LINE L1 -644 5922 5887 3 752 585 0 0 0 chr15 22019850 22019915 -81475059 + (TC)n Simple_repeat Simple_repeat 1 65 0 3 11 306 250 28 0 chr15 22020052 22020124 -81474850 - HAL1-3A_ME LINE L1 -809 2049 1976 3 753 23 0 0 0 chr15 22021222 22021245 -81473729 + AT_rich Low_complexity Low_complexity 1 23 0 3 753 234 0 0 0 chr15 22021250 22021276 -81473698 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 753 297 0 0 0 chr15 22021369 22021402 -81473572 + (TC)n Simple_repeat Simple_repeat 2 34 0 3 753 351 0 0 0 chr15 22021402 22021440 -81473534 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 753 531 0 0 0 chr15 22021440 22021498 -81473476 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 753 513 0 0 0 chr15 22023063 22023120 -81471854 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 753 762 50 0 0 chr15 22023120 22023218 -81471756 + (TG)n Simple_repeat Simple_repeat 2 100 0 4 753 7598 49 3 0 chr15 22023938 22024893 -81470081 - L1Md_F2 LINE L1 -699 5184 4227 4 753 3368 37 2 0 chr15 22024892 22025296 -81469678 + L1Md_F2 LINE L1 5181 5585 -298 4 753 7514 53 24 23 chr15 22025297 22026290 -81468684 + L1Md_F2 LINE L1 5587 6580 -2 4 753 865 110 110 0 chr15 22026380 22026526 -81468448 - L1_Mus1 LINE L1 -1 6566 6405 4 753 2760 130 2 9 chr15 22027549 22027975 -81466999 + Lx3A LINE L1 6549 6971 -10 4 753 231 305 85 0 chr15 22028459 22028577 -81466397 - L1MA8 LINE L1 -31 6260 6133 4 753 323 350 99 14 chr15 22028730 22028872 -81466102 - B4A SINE B4 -128 164 11 4 753 807 173 0 0 chr15 22029007 22029180 -81465794 + (CA)n Simple_repeat Simple_repeat 1 173 0 4 753 327 284 91 29 chr15 22029264 22029474 -81465500 - L1MA4 LINE L1 -387 5913 5691 5 753 299 280 178 20 chr15 22029661 22029858 -81465116 - L1MA4 LINE L1 -589 5723 5496 5 753 2337 101 9 6 chr15 22029925 22030273 -81464701 - L1_Mm LINE L1 -2231 3652 3304 5 753 1704 101 4 4 chr15 22030273 22030512 -81464462 + L1_Mus2 LINE L1 6327 6565 -1 5 753 310 287 171 13 chr15 22030577 22030729 -81464245 - L1MA4 LINE L1 -750 5393 5218 5 753 1573 43 0 0 chr15 22030808 22030992 -81463982 - B2_Mm1t SINE B2 -9 184 1 5 753 440 367 27 37 chr15 22031051 22031351 -81463623 - L1MA4 LINE L1 -1858 4285 3989 5 753 473 330 52 0 chr15 22031541 22031732 -81463242 - B3 SINE B2 -11 205 5 5 753 347 56 19 0 chr15 22032346 22032400 -81462574 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 5 753 682 201 21 14 chr15 22033011 22033152 -81461822 - B1_Mm SINE Alu 0 147 6 5 753 2049 132 25 0 chr15 22033998 22034317 -81460657 - ORR1A2 LTR MaLR 0 327 1 5 753 2103 196 30 33 chr15 22035532 22036129 -81458845 + Lx4A LINE L1 6369 7055 -3 5 753 400 237 107 25 chr15 22037159 22037280 -81457694 - Lx7 LINE L1 -1920 5776 5646 5 753 302 67 22 0 chr15 22037346 22037391 -81457583 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 753 477 40 0 51 chr15 22037480 22037559 -81457415 + (GGAGA)n Simple_repeat Simple_repeat 2 76 0 6 753 25 0 0 0 chr15 22037994 22038019 -81456955 + AT_rich Low_complexity Low_complexity 1 25 0 6 753 424 326 113 38 chr15 22038673 22038743 -81456231 - RMER5 LTR ERV1 -66 468 404 6 753 2719 54 0 0 chr15 22038743 22039075 -81455899 + IAPEY3_LTR LTR ERVK 1 332 0 6 753 424 326 113 38 chr15 22039075 22039323 -81455651 - RMER5 LTR ERV1 -131 403 126 6 753 339 319 95 106 chr15 22039325 22039683 -81455291 + RLTR12B LTR ERVK 1 354 -214 6 753 198 71 0 0 chr15 22040671 22040699 -81454275 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 753 227 329 44 6 chr15 22041033 22041192 -81453782 + L1M3 LINE L1 4939 5103 -1037 6 753 352 313 8 38 chr15 22042011 22042144 -81452830 - MLT1L LTR MaLR -63 547 419 6 753 434 88 0 14 chr15 22042784 22042853 -81452121 + (CA)n Simple_repeat Simple_repeat 1 68 0 6 753 351 0 0 0 chr15 22043080 22043119 -81451855 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 753 28 29 0 0 chr15 22043242 22043277 -81451697 + AT_rich Low_complexity Low_complexity 1 35 0 7 753 3290 206 110 35 chr15 22043498 22044388 -81450586 + RMER17B LTR ERVK 2 958 0 7 753 282 29 0 0 chr15 22045873 22045908 -81449066 + (GA)n Simple_repeat Simple_repeat 2 36 0 7 753 282 272 60 18 chr15 22045936 22046103 -81448871 + Lx2 LINE L1 5643 5786 -1211 7 753 259 288 121 23 chr15 22046367 22046541 -81448433 + Lx2 LINE L1 6030 6220 -80 7 753 2379 151 84 12 chr15 22046604 22047034 -81447940 + RMER6B LTR ERVK 1 461 0 7 753 480 35 0 0 chr15 22047036 22047094 -81447880 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 7 753 451 375 106 15 chr15 22047136 22047542 -81447432 - MLT2B5 LTR ERVL -150 567 125 7 753 622 228 16 0 chr15 22048519 22048646 -81446328 + B3 SINE B2 1 129 -87 7 753 614 255 41 29 chr15 22048945 22049115 -81445859 + Lx9 LINE L1 6542 6713 -931 7 753 269 150 83 0 chr15 22049115 22049175 -81445799 + Lx9 LINE L1 7393 7457 -187 8 753 2437 148 11 45 chr15 22049186 22049654 -81445320 + L1_Mur2 LINE L1 4388 4839 -1038 8 753 234 330 79 40 chr15 22050775 22050977 -81443997 - L2 LINE L2 -1358 2061 1852 8 753 1121 121 0 0 chr15 22051661 22051818 -81443156 + Lx2 LINE L1 6482 6638 -359 8 753 1249 133 5 9 chr15 22051822 22052035 -81442939 + Lx2 LINE L1 6775 6986 -11 8 753 26 0 0 0 chr15 22052771 22052797 -81442177 + AT_rich Low_complexity Low_complexity 1 26 0 8 753 378 171 0 0 chr15 22054805 22054875 -81440099 + (TA)n Simple_repeat Simple_repeat 1 70 0 8 753 24 67 0 0 chr15 22054898 22054943 -81440031 + AT_rich Low_complexity Low_complexity 1 45 0 8 753 2038 265 101 44 chr15 22054943 22055625 -81439349 - Lx6 LINE L1 0 7460 6740 8 753 952 119 6 6 chr15 22055655 22055815 -81439159 + (TTC)n Simple_repeat Simple_repeat 1 160 0 8 753 297 254 0 14 chr15 22055841 22055913 -81439061 - Lx6 LINE L1 -941 6519 6449 8 753 191 88 0 29 chr15 22056201 22056236 -81438738 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 8 753 21 0 0 0 chr15 22056455 22056476 -81438498 + AT_rich Low_complexity Low_complexity 1 21 0 9 753 29 78 0 0 chr15 22056679 22056743 -81438231 + AT_rich Low_complexity Low_complexity 1 64 0 9 753 261 348 45 0 chr15 22056767 22056864 -81438110 - B1F1 SINE Alu -5 122 15 9 753 1004 112 275 5 chr15 22056907 22057114 -81437860 - MYSERV6-int LTR ERVK -121 8838 8576 9 753 3366 141 69 2 chr15 22057303 22057856 -81437118 + Lx LINE L1 6058 6647 -7 9 753 25 31 0 0 chr15 22058200 22058232 -81436742 + AT_rich Low_complexity Low_complexity 1 32 0 9 753 1075 259 86 110 chr15 22058437 22059053 -81435921 - RMER6D LTR ERVK -4 716 116 9 753 1802 226 66 93 chr15 22059067 22059691 -81435283 + RMER19C LTR ERVK 2 608 -3 9 753 1322 57 40 0 chr15 22059691 22059866 -81435108 - L1Md_F2 LINE L1 -516 6066 5885 9 753 1206 114 11 0 chr15 22059867 22060043 -81434931 + L1_Mus1 LINE L1 6390 6567 0 9 753 325 312 52 47 chr15 22060135 22060367 -81434607 + L1MA8 LINE L1 5512 5744 -547 1 753 225 274 27 0 chr15 22060762 22060835 -81434139 + L1MA8 LINE L1 6193 6267 -24 1 753 210 115 55 55 chr15 22061202 22061257 -81433717 + T-rich Low_complexity Low_complexity 2 56 0 1 753 354 98 0 0 chr15 22062015 22062066 -81432908 + (GGAA)n Simple_repeat Simple_repeat 3 53 0 1 753 231 125 0 0 chr15 22062849 22062889 -81432085 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 1 753 1039 113 0 0 chr15 22063443 22063584 -81431390 + B1_Mus2 SINE Alu 3 143 -4 1 753 434 341 134 7 chr15 22064357 22064640 -81430334 - RMER15 LTR ERVL -2 573 255 1 753 266 252 78 29 chr15 22064682 22064784 -81430190 - RMER15 LTR ERVL -441 134 28 1 753 258 121 45 0 chr15 22065057 22065123 -81429851 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 753 302 297 75 25 chr15 22066019 22066178 -81428796 + MLT1B LTR MaLR 31 197 -193 1 753 254 329 56 42 chr15 22067241 22067384 -81427590 - ORR1E LTR MaLR -7 372 228 1 753 677 245 20 61 chr15 22067390 22067586 -81427388 + ORR1D1 LTR MaLR 2 189 -185 1 753 309 135 0 0 chr15 22067590 22067642 -81427332 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 753 230 169 34 0 chr15 22067652 22067711 -81427263 + C-rich Low_complexity Low_complexity 3 63 0 1 753 635 266 105 21 chr15 22067713 22067921 -81427053 + ORR1D1 LTR MaLR 147 384 0 1 753 477 345 39 15 chr15 22067935 22068138 -81426836 - ORR1E LTR MaLR -151 208 1 1 753 181 182 18 18 chr15 22068381 22068437 -81426537 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 753 719 111 8 0 chr15 22068511 22068628 -81426346 + RMER2 LTR ERV1 450 567 0 1 753 1970 255 23 6 chr15 22068641 22069170 -81425804 - L1_Mur3 LINE L1 -9 5871 5334 1 753 849 342 77 5 chr15 22069165 22069609 -81425365 + Lx7 LINE L1 6793 7268 -428 1 753 304 23 0 0 chr15 22069622 22069666 -81425308 + L1_Mus2 LINE L1 6523 6566 0 1 753 453 344 50 14 chr15 22069778 22069999 -81424975 - Lx8 LINE L1 -153 7320 7092 1 753 26 0 0 0 chr15 22071285 22071311 -81423663 + AT_rich Low_complexity Low_complexity 1 26 0 1 753 463 257 25 50 chr15 22072198 22072317 -81422657 - B4A SINE B4 0 292 177 1 753 5107 84 55 27 chr15 22072535 22072826 -81422148 - RLTR13C2 LTR ERVK 0 808 523 1 753 322 43 0 0 chr15 22072826 22072872 -81422102 + L1Md_F2 LINE L1 6524 6569 -13 1 753 243 0 0 0 chr15 22072878 22072905 -81422069 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 753 5107 84 55 27 chr15 22072905 22073392 -81421582 - RLTR13C2 LTR ERVK -286 522 1 1 753 27 73 0 0 chr15 22074498 22074553 -81420421 + AT_rich Low_complexity Low_complexity 1 55 0 1 753 5961 192 51 29 chr15 22075068 22076760 -81418214 - Lx5 LINE L1 0 7050 5284 1 753 857 107 20 0 chr15 22076760 22076910 -81418064 - L1_Mus4 LINE L1 0 6636 6484 1 753 3089 218 21 142 chr15 22076910 22077341 -81417633 - Lx5 LINE L1 -594 5292 4993 1 753 2655 133 0 12 chr15 22077341 22077753 -81417221 + MTB_Mm LTR MaLR 1 407 0 1 753 4192 141 144 92 chr15 22077755 22078799 -81416175 + MTB_Mm-int LTR MaLR 1 1098 0 1 753 2873 93 28 2 chr15 22078799 22079196 -81415778 + MTB_Mm LTR MaLR 1 407 0 1 753 1132 161 0 0 chr15 22079196 22079376 -81415598 - Lx5 LINE L1 -889 4988 4809 1 753 1526 180 81 0 chr15 22079383 22079678 -81415296 - ORR1A2 LTR MaLR -8 319 1 1 753 1376 170 6 83 chr15 22079679 22079993 -81414981 - Lx5 LINE L1 -1068 4809 4520 1 753 5663 172 48 32 chr15 22079993 22081275 -81413699 - Lx5 LINE L1 -1713 4164 2863 1 753 444 222 67 25 chr15 22081382 22081502 -81413472 - B1_Mur1 SINE Alu -1 148 24 1 753 333 284 25 76 chr15 22081416 22081534 -81413440 - MT2B LTR ERVL -336 265 154 1 753 3056 216 36 26 chr15 22082455 22083174 -81411800 - Lx2B LINE L1 -13 6987 6262 1 753 280 200 24 0 chr15 22083310 22083395 -81411579 + CT-rich Low_complexity Low_complexity 1 87 0 1 753 393 207 138 35 chr15 22083604 22083749 -81411225 - RMER12B LTR ERVK -11 1393 1234 1 753 332 305 42 14 chr15 22083794 22083937 -81411037 - MLT2B4 LTR ERVL -409 147 1 1 753 2029 115 17 67 chr15 22084023 22084367 -81410607 - ORR1A4 LTR MaLR -2 327 1 1 753 399 21 0 0 chr15 22085552 22085600 -81409374 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 1 753 1130 310 22 0 chr15 22085619 22085977 -81408997 - ORR1D2 LTR MaLR -4 366 1 1 753 203 128 0 60 chr15 22087581 22087631 -81407343 + T-rich Low_complexity Low_complexity 2 48 0 1 753 246 385 37 0 chr15 22087632 22087741 -81407233 - ID_B1 SINE B4 -1 223 111 1 753 477 0 0 0 chr15 22088422 22088475 -81406499 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 753 1206 97 0 0 chr15 22088916 22089091 -81405883 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 1 753 438 203 60 78 chr15 22089278 22089444 -81405530 - RMER1C Other Other -8 1334 1172 1 753 204 135 56 37 chr15 22090131 22090185 -81404789 + (TTATA)n Simple_repeat Simple_repeat 3 57 0 1 753 35 41 0 0 chr15 22090306 22090355 -81404619 + AT_rich Low_complexity Low_complexity 1 49 0 1 753 27 29 0 0 chr15 22090484 22090518 -81404456 + AT_rich Low_complexity Low_complexity 1 34 0 1 753 273 391 98 12 chr15 22090611 22090774 -81404200 + B4A SINE B4 26 202 -90 1 753 261 119 0 0 chr15 22090839 22090881 -81404093 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 753 289 362 17 17 chr15 22091166 22091284 -81403690 + ORR1E LTR MaLR 1 118 -241 1 753 216 170 0 0 chr15 22091296 22091349 -81403625 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 753 24 53 0 0 chr15 22091358 22091396 -81403578 + AT_rich Low_complexity Low_complexity 1 38 0 1 753 22 0 0 0 chr15 22091889 22091911 -81403063 + AT_rich Low_complexity Low_complexity 1 22 0 1 753 311 328 176 3 chr15 22091992 22092298 -81402676 - L1MC LINE L1 -2430 3716 3358 1 753 230 73 24 0 chr15 22092393 22092434 -81402540 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 1 753 243 322 16 40 chr15 22092434 22092560 -81402414 + CT-rich Low_complexity Low_complexity 4 126 0 1 753 1721 189 19 0 chr15 22092584 22092907 -81402067 + ORR1A4 LTR MaLR 1 329 0 1 753 261 277 121 0 chr15 22092942 22093025 -81401949 - MLT1A0 LTR MaLR -3 362 270 1 753 5188 100 36 16 chr15 22093433 22093595 -81401379 + L1_Mm LINE L1 4483 4639 -1244 1 753 251 28 0 27 chr15 22093595 22093632 -81401342 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1 753 5188 100 36 16 chr15 22093632 22094264 -81400710 + L1_Mm LINE L1 4640 5293 -590 1 753 837 338 104 3 chr15 22095213 22095539 -81399435 + MTE2b LTR MaLR 4 362 -17 1 753 693 157 19 45 chr15 22095651 22095805 -81399169 + Lx3B LINE L1 6823 6972 -1 1 753 477 90 0 0 chr15 22095837 22095904 -81399070 + (CA)n Simple_repeat Simple_repeat 1 67 0 1 753 2818 149 26 18 chr15 22095907 22096630 -81398344 + Lx4A LINE L1 5378 6113 -945 1 753 233 215 38 12 chr15 22096621 22096701 -81398273 + Lx4A LINE L1 6977 7058 0 1 753 22 0 0 0 chr15 22096701 22096723 -81398251 + AT_rich Low_complexity Low_complexity 1 22 0 1 753 246 229 28 28 chr15 22096792 22096864 -81398110 + L1M2 LINE L1 5491 5562 -738 1 753 1073 161 148 62 chr15 22097213 22097504 -81397470 - RLTR23 LTR ERV1 -104 326 11 1 753 277 327 38 6 chr15 22097690 22097850 -81397124 + L1M2 LINE L1 5557 5721 -579 1 753 462 132 0 0 chr15 22097856 22097932 -81397042 + (TA)n Simple_repeat Simple_repeat 1 76 0 1 753 225 128 0 0 chr15 22099718 22099765 -81395209 + (T)n Simple_repeat Simple_repeat 1 47 0 1 753 1701 274 49 40 chr15 22099807 22100378 -81394596 + MT-int LTR MaLR 249 824 -274 1 753 21 0 0 0 chr15 22100733 22100754 -81394220 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 1164 41 0 0 chr15 22101736 22101883 -81393091 + L1Md_A LINE L1 6435 6581 -1 1 753 518 367 7 0 chr15 22102072 22102219 -81392755 - RSINE1 SINE B4 -13 152 5 1 753 2128 242 69 71 chr15 22102329 22102951 -81392023 - RMER20B LTR ERVK 0 627 7 1 753 378 0 0 0 chr15 22103768 22103810 -81391164 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1 753 3339 273 36 102 chr15 22103864 22104479 -81390495 + Lx6 LINE L1 6128 6749 -711 1 753 486 0 0 0 chr15 22104479 22104533 -81390441 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 753 3339 273 36 102 chr15 22104533 22105186 -81389788 + Lx6 LINE L1 6750 7313 -147 1 753 244 352 145 19 chr15 22105515 22105729 -81389245 - L2 LINE L2 -677 2742 2502 1 753 198 403 52 0 chr15 22106381 22106535 -81388439 - L2 LINE L2 -1084 2335 2174 1 753 273 271 0 86 chr15 22106919 22107024 -81387950 + polypurine Low_complexity Low_complexity 2 97 0 1 753 21 57 0 0 chr15 22107102 22107137 -81387837 + AT_rich Low_complexity Low_complexity 1 35 0 1 753 705 24 0 0 chr15 22107173 22107256 -81387718 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 1 753 23 0 0 0 chr15 22108501 22108524 -81386450 + AT_rich Low_complexity Low_complexity 1 23 0 1 753 3521 99 8 4 chr15 22108532 22109057 -81385917 - L1_Mus2 LINE L1 0 6566 6067 1 753 457 145 0 38 chr15 22109059 22109138 -81385836 - MTB LTR MaLR -2 398 323 1 753 743 33 0 0 chr15 22109107 22109199 -81385775 - MTA_Mm LTR MaLR -304 92 1 1 753 9101 34 6 1 chr15 22109199 22110292 -81384682 - MTA_Mm-int LTR MaLR 0 1098 1 1 753 473 18 0 0 chr15 22110292 22110348 -81384626 - MTA_Mm LTR MaLR 0 400 345 1 753 767 33 0 0 chr15 22110342 22110434 -81384540 - MTA_Mm LTR MaLR -304 92 1 1 753 3734 65 0 0 chr15 22110434 22110909 -81384065 - L1_Mus2 LINE L1 -495 6071 5597 1 753 2828 183 25 11 chr15 22110908 22111439 -81383535 - Lx2B LINE L1 -46 6954 6417 1 753 729 300 88 44 chr15 22111591 22111867 -81383107 + ORR1D2 LTR MaLR 40 332 -38 1 753 1719 172 151 62 chr15 22111867 22112270 -81382704 + BGLII_B LTR ERVK 1 439 -2 1 753 729 300 88 44 chr15 22112270 22112310 -81382664 + ORR1D2 LTR MaLR 333 370 0 1 753 580 217 28 7 chr15 22112439 22112583 -81382391 + Lx LINE L1 6501 6647 -7 1 753 1164 61 0 0 chr15 22112709 22112856 -81382118 + B1_Mm SINE Alu 1 147 0 1 753 1268 219 11 29 chr15 22113779 22114052 -81380922 - MTC LTR MaLR -2 419 152 1 753 207 0 0 0 chr15 22115069 22115092 -81379882 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 753 28 48 0 0 chr15 22115228 22115270 -81379704 + AT_rich Low_complexity Low_complexity 1 42 0 1 753 1523 213 93 20 chr15 22115643 22115876 -81379098 + BGLII_B LTR ERVK 5 261 -180 1 753 522 46 0 0 chr15 22115876 22115941 -81379033 + (GGA)n Simple_repeat Simple_repeat 2 66 0 1 753 1523 213 93 20 chr15 22115941 22116104 -81378870 + BGLII_B LTR ERVK 262 430 -11 1 753 257 0 30 0 chr15 22117080 22117113 -81377861 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 753 267 31 0 0 chr15 22118180 22118212 -81376762 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 753 34636 96 12 17 chr15 22118694 22125281 -81369693 - L1Md_F2 LINE L1 0 6582 81 1 753 760 187 7 20 chr15 22125911 22126064 -81368910 - RMER6-int LTR ERVK -3026 151 1 1 753 1430 187 268 30 chr15 22126080 22126588 -81368386 - RMER6C LTR ERVK -61 629 1 1 753 191 103 0 25 chr15 22126724 22126764 -81368210 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 1 753 366 328 63 54 chr15 22127296 22127725 -81367249 + L1MA6 LINE L1 5648 6080 -220 1 753 204 94 37 19 chr15 22127766 22127820 -81367154 + (TATAA)n Simple_repeat Simple_repeat 5 59 0 2 753 1149 82 0 0 chr15 22127936 22128083 -81366891 + B1_Mus2 SINE Alu 1 147 0 2 753 270 136 0 0 chr15 22129247 22129291 -81365683 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 753 270 207 0 0 chr15 22129293 22129351 -81365623 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 753 495 271 83 19 chr15 22129351 22129554 -81365420 - B3A SINE B2 -13 203 1 2 753 228 398 0 10 chr15 22130681 22130780 -81364194 + MLT1H LTR MaLR 130 227 -322 2 753 498 33 0 0 chr15 22131418 22131478 -81363496 + (GA)n Simple_repeat Simple_repeat 2 61 0 2 753 31 26 0 0 chr15 22131479 22131517 -81363457 + AT_rich Low_complexity Low_complexity 1 38 0 2 753 25 0 0 0 chr15 22131562 22131587 -81363387 + AT_rich Low_complexity Low_complexity 1 25 0 2 753 235 273 120 21 chr15 22132074 22132216 -81362758 - L1M2 LINE L1 -443 5848 5693 2 753 478 242 135 16 chr15 22132300 22132493 -81362481 + L1M2 LINE L1 4875 5090 -1053 2 753 189 0 0 0 chr15 22132767 22132788 -81362186 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 2 753 2945 96 78 88 chr15 22132972 22133196 -81361778 + MURVY-LTR LTR ERV1 1 200 -319 2 753 198 0 0 0 chr15 22133196 22133218 -81361756 + (CCCCCA)n Simple_repeat Simple_repeat 5 26 0 2 753 2945 96 78 88 chr15 22133218 22133517 -81361457 + MURVY-LTR LTR ERV1 201 519 0 2 753 918 252 31 22 chr15 22134576 22134799 -81360175 - Lx6 LINE L1 0 7460 7236 2 753 37 0 0 0 chr15 22134880 22134917 -81360057 + AT_rich Low_complexity Low_complexity 1 37 0 2 753 1925 197 3 0 chr15 22134932 22135313 -81359661 + Lx4B LINE L1 2180 2561 -3319 2 753 351 0 0 0 chr15 22135341 22135380 -81359594 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 753 497 216 26 121 chr15 22135486 22135535 -81359439 + Lx6 LINE L1 6695 6737 -723 2 753 324 0 0 0 chr15 22135535 22135571 -81359403 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 2 753 497 216 26 121 chr15 22135571 22135711 -81359263 + Lx6 LINE L1 6738 6866 -594 2 753 4855 160 11 26 chr15 22135706 22136857 -81358117 + Lx4B LINE L1 5032 6168 -890 2 753 243 0 0 0 chr15 22136871 22136898 -81358076 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 2 753 779 240 19 76 chr15 22136929 22137191 -81357783 - Lx4B LINE L1 -21 7037 6791 2 753 2430 81 39 3 chr15 22137214 22137548 -81357426 - MTB LTR MaLR -54 346 1 2 753 4826 116 68 78 chr15 22137548 22138486 -81356488 - MTB-int LTR MaLR 0 1098 170 2 753 2292 220 54 13 chr15 22138486 22139043 -81355931 + Lx4B LINE L1 6471 7050 -8 2 753 22 0 0 0 chr15 22139043 22139065 -81355909 + AT_rich Low_complexity Low_complexity 1 22 0 2 753 234 0 0 0 chr15 22139122 22139148 -81355826 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2 753 537 59 9 47 chr15 22140091 22140197 -81354777 + Lx LINE L1 6547 6648 -6 2 753 561 136 10 0 chr15 22141020 22141123 -81353851 + Lx2 LINE L1 6893 6996 -1 2 753 521 53 0 0 chr15 22141178 22141243 -81353731 + L1_Mm LINE L1 5525 5589 -297 2 753 8414 30 1 1 chr15 22141243 22142239 -81352735 + L1Md_T LINE L1 5587 6582 0 2 753 660 103 0 0 chr15 22142645 22142761 -81352213 + (CA)n Simple_repeat Simple_repeat 2 117 0 2 753 468 0 0 0 chr15 22142775 22142827 -81352147 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 753 936 51 0 0 chr15 22143054 22143172 -81351802 + (TA)n Simple_repeat Simple_repeat 2 119 0 2 753 493 306 31 54 chr15 22143504 22143763 -81351211 - Lx9 LINE L1 -459 7185 6933 2 753 1981 234 83 18 chr15 22143763 22143842 -81351132 + RLTR40 LTR ERVK 21 100 -717 2 753 2265 64 0 0 chr15 22143842 22144125 -81350849 + L1_Mus1 LINE L1 6285 6567 0 2 753 1981 234 83 18 chr15 22144125 22144549 -81350425 + RLTR40 LTR ERVK 101 559 -258 2 753 516 32 0 0 chr15 22144549 22144611 -81350363 + (TCTCCC)n Simple_repeat Simple_repeat 3 64 0 2 753 210 91 0 0 chr15 22144613 22144646 -81350328 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 753 1981 234 83 18 chr15 22144646 22144681 -81350293 + RLTR40 LTR ERVK 560 594 -223 2 753 487 299 79 22 chr15 22144755 22144984 -81349990 + Lx9 LINE L1 7238 7479 -165 2 753 229 278 0 14 chr15 22145012 22145085 -81349889 + Lx9 LINE L1 7566 7637 -7 2 753 269 297 14 0 chr15 22145831 22145905 -81349069 + L1MCa LINE L1 680 754 -5754 2 753 26 64 0 0 chr15 22146169 22146216 -81348758 + AT_rich Low_complexity Low_complexity 1 47 0 2 753 1421 50 0 0 chr15 22146222 22146402 -81348572 - L1_Mus1 LINE L1 -1 6566 6387 2 753 22 0 0 0 chr15 22146743 22146765 -81348209 + AT_rich Low_complexity Low_complexity 1 22 0 2 753 1246 226 49 30 chr15 22146781 22147086 -81347888 - ORR1B2 LTR MaLR -56 311 1 2 753 341 304 14 63 chr15 22147194 22147478 -81347496 + L1M2 LINE L1 2852 3121 -3022 2 753 1054 324 66 16 chr15 22147576 22148015 -81346959 + Lx8 LINE L1 6145 6605 -868 2 753 198 0 0 0 chr15 22148234 22148256 -81346718 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 753 258 56 0 0 chr15 22148256 22148292 -81346682 + (ATTG)n Simple_repeat Simple_repeat 1 36 0 2 753 257 328 8 47 chr15 22148439 22148567 -81346407 - Lx8 LINE L1 -1036 6437 6315 2 753 219 114 0 0 chr15 22149348 22149383 -81345591 + (A)n Simple_repeat Simple_repeat 1 35 0 2 754 477 0 0 0 chr15 22153084 22153137 -81341837 + (TCTA)n Simple_repeat Simple_repeat 3 55 0 2 754 214 351 0 95 chr15 22153150 22153276 -81341698 - RSINE1 SINE B4 0 165 52 2 754 224 224 15 0 chr15 22153604 22153671 -81341303 + (TATATG)n Simple_repeat Simple_repeat 3 70 0 2 754 222 319 149 0 chr15 22154314 22154408 -81340566 - B3 SINE B2 -68 148 41 2 754 250 263 8 71 chr15 22154803 22154930 -81340044 + L1M2 LINE L1 5517 5635 -677 2 754 1065 275 67 13 chr15 22155022 22155501 -81339473 + Lx7 LINE L1 5428 5950 -1523 2 754 421 393 28 35 chr15 22155619 22156046 -81338928 + Lx7 LINE L1 6954 7377 -96 2 754 22 0 0 0 chr15 22156688 22156710 -81338264 + AT_rich Low_complexity Low_complexity 1 22 0 2 754 183 229 0 0 chr15 22157533 22157594 -81337380 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 754 439 314 6 12 chr15 22157625 22157796 -81337178 + (TATG)n Simple_repeat Simple_repeat 3 172 0 2 754 237 356 168 9 chr15 22159746 22159978 -81334996 + Lx8 LINE L1 7201 7469 -4 2 754 318 338 49 0 chr15 22161474 22161616 -81333358 + L2 LINE L2 1985 2133 -1286 2 754 351 65 0 0 chr15 22162152 22162198 -81332776 + (TATG)n Simple_repeat Simple_repeat 3 48 0 2 754 522 350 38 31 chr15 22163017 22163306 -81331668 - B4A SINE B4 0 292 2 2 754 4347 56 0 0 chr15 22164077 22164609 -81330365 - L1_Mus1 LINE L1 0 6567 6036 2 754 684 0 0 0 chr15 22165078 22165154 -81329820 + (TA)n Simple_repeat Simple_repeat 2 77 0 2 754 418 272 172 44 chr15 22165572 22165776 -81329198 - RMER15 LTR ERVL -18 557 328 2 754 841 268 21 0 chr15 22165787 22165977 -81328997 - B3 SINE B2 0 216 23 2 754 1342 242 165 5 chr15 22165979 22166531 -81328443 + Lx6 LINE L1 6788 7427 -33 2 754 234 0 0 0 chr15 22166626 22166652 -81328322 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 2 754 321 283 0 0 chr15 22166934 22167033 -81327941 + ERVL-int LTR ERVL 5315 5413 -344 2 754 352 283 128 21 chr15 22167455 22167596 -81327378 + B4A SINE B4 121 276 -16 2 754 239 332 51 67 chr15 22167694 22167914 -81327060 + MLT2D LTR ERVL 242 560 0 2 754 8082 141 33 16 chr15 22168678 22170466 -81324508 + Lx3C LINE L1 5149 6974 -2 2 754 5106 89 1 10 chr15 22170695 22171407 -81323567 - Lx LINE L1 -12 6642 5937 2 754 604 122 0 0 chr15 22171407 22171497 -81323477 + Lx LINE L1 5902 5991 -663 2 754 426 244 0 0 chr15 22171751 22171870 -81323104 + L1_Mur3 LINE L1 828 946 -6766 2 754 35 54 0 0 chr15 22172873 22172929 -81322045 + AT_rich Low_complexity Low_complexity 1 56 0 2 754 1449 118 0 5 chr15 22173819 22174040 -81320934 + Lx2 LINE L1 6452 6671 -326 2 754 560 140 0 0 chr15 22174051 22174151 -81320823 + Lx2 LINE L1 6897 6996 -1 2 754 772 263 51 16 chr15 22174270 22174525 -81320449 - Lx9 LINE L1 -471 7173 6910 2 754 322 279 121 6 chr15 22174524 22174690 -81320284 + Lx9 LINE L1 7332 7516 -128 2 754 1767 199 78 10 chr15 22174690 22175075 -81319899 + MTC LTR MaLR 3 413 -8 2 754 429 116 0 0 chr15 22175076 22175145 -81319829 + (CATA)n Simple_repeat Simple_repeat 4 72 0 2 754 517 385 81 0 chr15 22175431 22175652 -81319322 + B4A SINE B4 27 265 -27 2 754 384 22 0 0 chr15 22175709 22175754 -81319220 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 754 552 81 0 0 chr15 22175754 22175841 -81319133 + (GA)n Simple_repeat Simple_repeat 1 87 0 2 754 491 272 48 0 chr15 22176759 22176884 -81318090 + B1_Mur1 SINE Alu 7 137 -12 2 754 729 175 0 0 chr15 22176885 22177051 -81317923 + CT-rich Low_complexity Low_complexity 2 167 0 2 754 183 114 0 0 chr15 22177054 22177089 -81317885 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 2 754 3985 78 16 7 chr15 22177424 22177979 -81316995 + Lx3_Mus LINE L1 6450 7009 0 2 754 330 368 60 68 chr15 22178078 22178414 -81316560 + ORR1E LTR MaLR 27 359 0 2 754 201 121 0 0 chr15 22180326 22180359 -81314615 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 754 513 336 24 5 chr15 22180634 22180846 -81314128 + B3 SINE B2 1 216 0 2 754 287 284 145 29 chr15 22181303 22181441 -81313533 - B3 SINE B2 -34 182 29 2 754 618 14 0 0 chr15 22182192 22182263 -81312711 + (GA)n Simple_repeat Simple_repeat 1 71 0 2 754 272 96 39 0 chr15 22182463 22182515 -81312459 + (TCTCTG)n Simple_repeat Simple_repeat 2 55 0 2 754 258 211 0 0 chr15 22182739 22182796 -81312178 + T-rich Low_complexity Low_complexity 4 60 0 2 754 2323 193 24 86 chr15 22183706 22184255 -81310719 - RLTR24 LTR ERV1 0 529 15 2 754 6603 85 8 7 chr15 22184468 22185372 -81309602 + L1_Mus3 LINE L1 5664 6568 -70 2 754 1536 251 8 8 chr15 22185374 22185748 -81309226 + Lx6 LINE L1 6378 6751 -709 2 754 1992 276 58 66 chr15 22185790 22186515 -81308459 + Lx6 LINE L1 6741 7459 -1 2 754 1193 40 0 0 chr15 22187277 22187428 -81307546 - L1Md_A LINE L1 0 6582 6432 2 754 197 346 128 12 chr15 22187730 22187973 -81307001 + L2 LINE L2 1816 2086 -1333 2 754 402 21 0 0 chr15 22188183 22188230 -81306744 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 754 222 37 0 0 chr15 22188230 22188256 -81306718 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 754 1176 253 171 44 chr15 22188337 22188841 -81306133 - Lx8 LINE L1 -342 7131 6564 3 754 557 252 25 13 chr15 22189228 22189385 -81305589 + Lx8 LINE L1 6578 6736 -737 3 754 482 0 17 0 chr15 22189450 22189508 -81305466 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 3 754 329 307 80 7 chr15 22189513 22189664 -81305310 + Lx8 LINE L1 6925 7086 -387 3 754 198 206 0 0 chr15 22190048 22190111 -81304863 + A-rich Low_complexity Low_complexity 1 63 0 3 754 201 39 0 0 chr15 22190250 22190276 -81304698 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 3 754 1298 97 11 5 chr15 22190473 22190659 -81304315 - B2_Mm2 SINE B2 -2 193 7 3 754 1128 318 19 11 chr15 22191207 22191579 -81303395 + RMER1B Other Other 2 376 -690 3 754 656 316 219 0 chr15 22191630 22191970 -81303004 + RMER1A Other Other 16 435 -595 3 754 288 242 40 48 chr15 22192034 22192160 -81302814 - L1MB8 LINE L1 -2 6176 6052 3 754 1232 79 60 38 chr15 22192264 22192448 -81302526 - B2_Mm2 SINE B2 -7 188 1 3 754 851 311 42 60 chr15 22193046 22193191 -81301783 + MTEa LTR MaLR 1 139 -240 3 754 2254 217 30 25 chr15 22193191 22193715 -81301259 + RLTR24 LTR ERV1 1 527 -2 3 754 851 311 42 60 chr15 22193715 22193754 -81301220 + MTEa LTR MaLR 140 182 -197 3 754 1043 96 0 14 chr15 22193754 22193894 -81301080 + B1_Mus1 SINE Alu 1 140 -8 3 754 333 0 0 0 chr15 22193894 22193931 -81301043 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 3 754 851 311 42 60 chr15 22193938 22194138 -81300836 + MTEa LTR MaLR 183 379 0 3 754 283 301 42 12 chr15 22194758 22194923 -81300051 - L1M2 LINE L1 -957 5186 5017 3 754 423 0 0 0 chr15 22194947 22194994 -81299980 + (T)n Simple_repeat Simple_repeat 1 47 0 3 754 327 379 28 7 chr15 22194995 22195136 -81299838 + B1_Mur2 SINE Alu 3 146 -3 3 754 467 335 119 38 chr15 22195307 22195651 -81299323 - ORR1D2 LTR MaLR 0 374 3 3 754 225 346 24 36 chr15 22195991 22196156 -81298818 - L1M2 LINE L1 -3393 2750 2588 3 754 467 292 60 27 chr15 22196222 22196405 -81298569 - B3A SINE B2 -7 191 3 3 754 352 361 77 67 chr15 22196448 22196745 -81298229 - ORR1E LTR MaLR -52 307 8 3 754 216 86 0 0 chr15 22197255 22197290 -81297684 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 754 27 29 0 0 chr15 22197388 22197422 -81297552 + AT_rich Low_complexity Low_complexity 1 34 0 3 754 40052 22 2 6 chr15 22197713 22204086 -81290888 - L1Md_T LINE L1 0 6582 241 3 754 3887 35 33 2 chr15 22205237 22205725 -81289249 - L1Md_F3 LINE L1 0 6584 6082 3 754 348 24 0 0 chr15 22208024 22208065 -81286909 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 3 754 4537 106 34 0 chr15 22208268 22208941 -81286033 - L1_Mus3 LINE L1 -3 6635 5940 3 754 21 36 0 0 chr15 22209271 22209299 -81285675 + AT_rich Low_complexity Low_complexity 1 28 0 3 754 709 214 93 0 chr15 22209734 22209875 -81285099 - RCHARR1 DNA MER1_type -4 970 813 3 754 321 26 0 0 chr15 22209875 22209913 -81285061 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 3 754 709 214 93 0 chr15 22209913 22209953 -81285021 - RCHARR1 DNA MER1_type -162 812 773 3 754 21 0 0 0 chr15 22210084 22210105 -81284869 + AT_rich Low_complexity Low_complexity 1 21 0 3 754 314 368 35 7 chr15 22211662 22211807 -81283167 + B1F SINE Alu 1 149 0 3 754 241 314 0 14 chr15 22211878 22211949 -81283025 - ID4_ SINE ID -9 74 5 3 754 223 283 0 0 chr15 22211956 22212009 -81282965 - PB1D10 SINE Alu -6 111 59 3 754 233 309 14 14 chr15 22211979 22212048 -81282926 - ID_B1 SINE B4 -26 198 130 3 754 234 281 81 56 chr15 22212185 22212505 -81282469 + L1MEg LINE L1 1029 1356 -4728 3 754 286 123 17 17 chr15 22212567 22212625 -81282349 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 754 4575 96 62 0 chr15 22212675 22213341 -81281633 - L1_Mus1 LINE L1 0 6567 5861 3 754 31136 92 5 3 chr15 22213341 22218629 -81276345 - L1Md_F LINE L1 -174 5709 415 3 754 697 303 106 19 chr15 22219332 22219699 -81275275 - Lx8 LINE L1 -93 7380 6982 3 754 1058 96 0 20 chr15 22219973 22220122 -81274852 + B1_Mm SINE Alu 2 147 0 3 754 311 319 61 17 chr15 22220180 22220295 -81274679 + B3A SINE B2 2 121 -77 3 754 434 18 0 18 chr15 22220337 22220393 -81274581 + (CATA)n Simple_repeat Simple_repeat 2 56 0 3 754 803 342 44 16 chr15 22220499 22220976 -81273998 + Lx9 LINE L1 6135 6717 -927 3 754 37462 45 8 3 chr15 22220979 22227157 -81267817 - L1Md_T LINE L1 0 6585 282 3 754 406 311 48 16 chr15 22227169 22227365 -81267609 + Lx9 LINE L1 6659 6956 -688 3 754 3808 134 13 0 chr15 22227503 22228099 -81266875 + Lx3A LINE L1 6372 6975 -6 3 754 423 0 0 0 chr15 22228321 22228368 -81266606 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 754 441 0 0 0 chr15 22228368 22228416 -81266558 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 754 22 70 0 0 chr15 22229030 22229073 -81265901 + AT_rich Low_complexity Low_complexity 1 43 0 3 754 388 395 64 34 chr15 22229230 22229668 -81265306 - Lx8 LINE L1 -61 7412 6962 3 754 805 214 92 68 chr15 22229721 22229927 -81265047 - URR1A DNA MER1_type -15 211 1 3 754 34 0 0 0 chr15 22230751 22230785 -81264189 + AT_rich Low_complexity Low_complexity 1 34 0 3 754 27 81 0 0 chr15 22231343 22231405 -81263569 + AT_rich Low_complexity Low_complexity 1 62 0 3 754 231 114 0 0 chr15 22232437 22232472 -81262502 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 3 754 212 319 41 16 chr15 22232480 22232601 -81262373 + BC1_Mm scRNA scRNA 8 131 -21 3 754 321 26 0 0 chr15 22232601 22232639 -81262335 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 3 754 792 274 218 23 chr15 22232671 22233019 -81261955 + Lx6 LINE L1 6952 7367 -93 3 754 331 182 0 64 chr15 22233496 22233590 -81261384 + Lx6 LINE L1 7364 7451 -9 3 754 5046 69 3 1 chr15 22233670 22234335 -81260639 - L1Md_F2 LINE L1 0 6582 5917 3 754 18439 35 2 2 chr15 22234337 22236575 -81258399 + L1Md_F2 LINE L1 3646 5883 0 3 754 3726 80 22 11 chr15 22237102 22237644 -81257330 + L1_Mus3 LINE L1 6089 6636 -2 3 754 1057 196 30 13 chr15 22237923 22238215 -81256759 + Lx3A LINE L1 6738 7008 -1 3 754 27 81 0 0 chr15 22238309 22238371 -81256603 + AT_rich Low_complexity Low_complexity 1 62 0 3 754 2432 161 66 36 chr15 22239299 22239800 -81255174 + RMER20A LTR ERVK 1 516 0 3 754 501 32 0 0 chr15 22239874 22239937 -81255037 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 754 484 168 28 28 chr15 22239993 22240134 -81254840 + Lx9 LINE L1 7504 7644 0 3 754 242 229 16 0 chr15 22240220 22240281 -81254693 + L1M1 LINE L1 5819 5880 -420 3 754 645 315 96 59 chr15 22241360 22241870 -81253104 - Lx9 LINE L1 -242 7402 6874 3 754 209 283 0 0 chr15 22241980 22242026 -81252948 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 754 190 211 96 0 chr15 22242727 22242779 -81252195 + L3 LINE CR1 1362 1418 -3071 3 754 22 80 0 0 chr15 22243281 22243331 -81251643 + AT_rich Low_complexity Low_complexity 1 50 0 3 754 253 351 47 9 chr15 22243694 22243907 -81251067 + Lx9 LINE L1 7066 7286 -358 3 754 22 56 0 0 chr15 22244284 22244320 -81250654 + AT_rich Low_complexity Low_complexity 1 36 0 3 754 1106 60 0 13 chr15 22244812 22244964 -81250010 + (TTTC)n Simple_repeat Simple_repeat 2 151 0 3 754 1152 242 83 129 chr15 22245100 22245703 -81249271 + RMER15 LTR ERVL 1 575 0 3 754 2789 91 34 0 chr15 22245943 22246350 -81248624 - BGLII LTR ERVK 0 421 1 3 754 1695 192 116 22 chr15 22246555 22246914 -81248060 + RMER6B LTR ERVK 1 393 -68 3 754 527 185 17 0 chr15 22246914 22247033 -81247941 - Lx2A1 LINE L1 -2 7006 6886 3 754 1695 192 116 22 chr15 22247033 22247077 -81247897 + RMER6B LTR ERVK 394 441 -20 3 754 2804 248 98 23 chr15 22247641 22248805 -81246169 - RMER1B Other Other -11 1055 42 3 754 3155 135 63 60 chr15 22249095 22249325 -81245649 - L1_Mur2 LINE L1 -3564 2313 2050 3 754 516 77 0 0 chr15 22249325 22249403 -81245571 + (TG)n Simple_repeat Simple_repeat 2 79 0 3 754 3155 135 63 60 chr15 22249403 22249840 -81245134 - L1_Mur2 LINE L1 -3828 2049 1645 3 754 2686 28 3 30 chr15 22249840 22250175 -81244799 - IAPLTR2b LTR ERVK 0 327 2 3 754 467 174 0 0 chr15 22250195 22250287 -81244687 + L1_Mur2 LINE L1 1973 2064 -3813 3 754 4228 156 9 37 chr15 22250302 22250486 -81244488 - L1_Mur2 LINE L1 -5762 1324 1150 3 754 2864 153 6 6 chr15 22250486 22250980 -81243994 + Lx LINE L1 6159 6652 -2 3 754 4228 156 9 37 chr15 22250980 22251558 -81243416 - L1_Mur2 LINE L1 -5937 1149 583 3 754 652 276 28 19 chr15 22251559 22251773 -81243201 - Lx7 LINE L1 -772 6924 6709 3 754 413 200 82 21 chr15 22251825 22251922 -81243052 + RMER20B LTR ERVK 318 420 -207 3 754 937 242 34 34 chr15 22252234 22252369 -81242605 - Lx7 LINE L1 -1644 6052 5919 3 754 2685 57 0 0 chr15 22252369 22252701 -81242273 + IAPEY3_LTR LTR ERVK 1 332 0 3 754 937 242 34 34 chr15 22252701 22252856 -81242118 - Lx7 LINE L1 -1778 5918 5762 3 754 2901 251 15 17 chr15 22252875 22253528 -81241446 - Lx5 LINE L1 0 7050 6399 3 754 475 58 22 44 chr15 22253556 22253646 -81241328 - L1_Mus3 LINE L1 -6 6632 6545 3 754 2998 224 25 28 chr15 22253632 22254517 -81240457 - Lx5 LINE L1 -679 6371 5472 3 754 1111 164 15 5 chr15 22255230 22255426 -81239548 - ORR1A2 LTR MaLR -51 276 79 3 754 313 386 86 16 chr15 22256000 22256187 -81238787 + B4A SINE B4 8 207 -85 3 754 804 50 0 0 chr15 22256258 22256359 -81238615 + (TG)n Simple_repeat Simple_repeat 2 102 0 3 754 207 0 0 0 chr15 22256435 22256458 -81238516 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 754 30 27 0 0 chr15 22256977 22257014 -81237960 + AT_rich Low_complexity Low_complexity 1 37 0 3 754 956 97 67 0 chr15 22257045 22257179 -81237795 - B1_Mus1 SINE Alu -2 146 4 3 754 26 50 0 0 chr15 22257225 22257265 -81237709 + AT_rich Low_complexity Low_complexity 1 40 0 3 754 1088 83 7 0 chr15 22257597 22257742 -81237232 + B1_Mus2 SINE Alu 2 147 0 3 754 349 70 59 20 chr15 22257742 22257844 -81237130 + (CAAA)n Simple_repeat Simple_repeat 3 108 0 3 754 510 17 0 0 chr15 22257974 22258033 -81236941 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 754 214 186 0 0 chr15 22258349 22258392 -81236582 + T-rich Low_complexity Low_complexity 1 43 0 3 754 1076 68 0 45 chr15 22258393 22258547 -81236427 - B1_Mus1 SINE Alu 0 148 2 3 754 325 271 52 10 chr15 22258548 22258559 -81236415 - B4A SINE B4 -47 245 235 3 754 454 304 53 19 chr15 22258559 22258767 -81236207 - B3 SINE B2 -1 215 1 3 754 325 271 52 10 chr15 22258767 22258852 -81236122 - B4A SINE B4 -58 234 147 3 754 1948 249 38 38 chr15 22259189 22259667 -81235307 + MT2A LTR ERVL 1 482 -51 4 754 1179 71 94 6 chr15 22259667 22259838 -81235136 + B2_Mm2 SINE B2 1 186 -9 4 754 1948 249 38 38 chr15 22259838 22259882 -81235092 + MT2A LTR ERVL 483 523 -10 4 754 315 371 72 52 chr15 22259995 22260245 -81234729 + L1M4 LINE L1 5473 5727 -447 4 754 219 69 0 0 chr15 22260786 22260815 -81234159 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 754 336 326 117 44 chr15 22261184 22261527 -81233447 + MamRep605 Unknown Unknown 59 426 -450 4 754 300 265 48 19 chr15 22261827 22261931 -81233043 - B4A SINE B4 -58 234 128 4 754 336 300 22 58 chr15 22261936 22262074 -81232900 + ORR1D-int LTR MaLR 587 719 -651 4 754 21 57 0 0 chr15 22263102 22263137 -81231837 + AT_rich Low_complexity Low_complexity 1 35 0 4 754 2525 249 63 0 chr15 22263334 22263975 -81230999 - Lx3C LINE L1 -1 6999 6312 4 754 186 167 0 0 chr15 22264086 22264122 -81230852 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 754 25 0 0 0 chr15 22264154 22264179 -81230795 + AT_rich Low_complexity Low_complexity 1 25 0 4 754 204 40 0 0 chr15 22265036 22265061 -81229913 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 754 708 364 42 13 chr15 22265182 22265494 -81229480 - ORR1D2 LTR MaLR -47 323 3 4 754 600 221 29 22 chr15 22265499 22265638 -81229336 - ORR1D2-int LTR MaLR -3 1367 1228 4 754 2880 240 59 15 chr15 22265638 22266354 -81228620 + Lx6 LINE L1 6712 7458 -2 4 754 1965 309 91 62 chr15 22266363 22267494 -81227480 - ORR1D2-int LTR MaLR -180 1190 1 4 754 945 298 53 12 chr15 22267529 22267848 -81227126 - ORR1D2 LTR MaLR -38 332 1 4 754 28 0 0 0 chr15 22268102 22268130 -81226844 + AT_rich Low_complexity Low_complexity 1 28 0 4 754 257 257 94 106 chr15 22268840 22269010 -81225964 - RMER15 LTR ERVL -407 168 1 4 754 833 107 8 0 chr15 22269299 22269430 -81225544 + (GAAAA)n Simple_repeat Simple_repeat 3 134 0 4 754 244 276 58 86 chr15 22269489 22269628 -81225346 + MLT1A LTR MaLR 239 373 -1 4 754 1301 317 93 14 chr15 22269629 22270093 -81224881 + MLT1A-int LTR MaLR 2 507 -1228 4 754 4593 67 20 7 chr15 22270093 22270696 -81224278 + L1Md_F2 LINE L1 5959 6569 -13 4 754 1301 317 93 14 chr15 22270696 22270801 -81224173 + MLT1A-int LTR MaLR 508 616 -1119 4 754 343 350 74 28 chr15 22271022 22271307 -81223667 + MLT1A0 LTR MaLR 29 326 -39 4 754 379 269 8 15 chr15 22271948 22272080 -81222894 + Lx6 LINE L1 7319 7449 -11 4 754 32 26 0 0 chr15 22272185 22272224 -81222750 + AT_rich Low_complexity Low_complexity 1 39 0 4 754 249 33 0 0 chr15 22272225 22272255 -81222719 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 754 531 374 0 0 chr15 22272265 22272396 -81222578 - RSINE1 SINE B4 -33 132 2 4 754 13344 135 23 29 chr15 22274965 22277958 -81217016 + L1VL4 LINE L1 148 3116 -443 4 754 1726 105 14 40 chr15 22277958 22278236 -81216738 + RMER17A LTR ERVK 1 271 -618 4 754 4082 30 6 0 chr15 22278237 22278746 -81216228 + L1Md_F2 LINE L1 5074 5585 -298 4 754 7680 50 16 7 chr15 22278747 22279734 -81215240 + L1Md_F2 LINE L1 5587 6582 0 4 754 2709 122 34 56 chr15 22279754 22280292 -81214682 + RMER17A LTR ERVK 226 751 0 4 754 4908 131 29 35 chr15 22280292 22281240 -81213734 + L1_Mm LINE L1 3467 4408 -1475 4 754 587 289 140 92 chr15 22281318 22281646 -81213328 + MTD LTR MaLR 44 387 -13 4 94 2732 193 74 2 chr15 22282175 22282307 -81212667 - RMER1A Other Other 0 1030 886 4 755 240 59 0 0 chr15 22282307 22282341 -81212633 + (CCA)n Simple_repeat Simple_repeat 1 34 0 4 755 2732 193 74 2 chr15 22282341 22282789 -81212185 - RMER1A Other Other -145 885 409 4 755 484 287 138 0 chr15 22282803 22282970 -81212004 - RMER1B Other Other -876 190 1 4 755 1244 103 38 5 chr15 22283440 22283626 -81211348 + B2_Mm2 SINE B2 1 192 -3 4 755 21 57 0 0 chr15 22283662 22283697 -81211277 + AT_rich Low_complexity Low_complexity 1 35 0 4 755 1246 246 71 147 chr15 22284074 22284735 -81210239 + RMER19C LTR ERVK 1 611 0 4 755 2258 198 42 9 chr15 22284741 22285195 -81209779 - RMER6D LTR ERVK -249 471 3 4 755 235 345 82 44 chr15 22285385 22285567 -81209407 - MLT1A LTR MaLR -42 332 144 4 755 298 316 23 97 chr15 22285713 22285888 -81209086 + MLT1A1 LTR MaLR 229 390 -18 4 755 190 364 8 71 chr15 22286053 22286180 -81208794 - L2 LINE L2 -545 2874 2756 4 755 999 110 61 12 chr15 22286495 22286644 -81208330 + B2_Mm2 SINE B2 2 159 -36 4 755 201 74 0 0 chr15 22286644 22286671 -81208303 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 4 755 999 110 61 12 chr15 22286671 22286686 -81208288 + B2_Mm2 SINE B2 160 174 -21 4 755 1095 64 7 0 chr15 22286686 22286827 -81208147 + B1_Mus2 SINE Alu 1 142 -5 4 755 580 286 120 39 chr15 22287080 22287364 -81207610 - Lx8 LINE L1 -74 7399 7093 4 755 339 25 0 0 chr15 22287365 22287405 -81207569 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 755 445 271 84 14 chr15 22287413 22287555 -81207419 - Lx8 LINE L1 -493 6980 6829 4 755 327 299 124 22 chr15 22287703 22287840 -81207134 - Lx8 LINE L1 -823 6650 6500 4 755 30 0 0 0 chr15 22287934 22287964 -81207010 + AT_rich Low_complexity Low_complexity 1 30 0 4 755 333 148 0 0 chr15 22289091 22289145 -81205829 - ORR1B1 LTR MaLR 0 394 341 4 755 3242 73 0 18 chr15 22289145 22289588 -81205386 - L1Md_F2 LINE L1 -12 6570 6136 4 755 19468 86 10 1 chr15 22289588 22292442 -81202532 - L1_Mm LINE L1 -700 5183 2304 4 755 2177 77 51 3 chr15 22292442 22292753 -81202221 - IAPLTR2b LTR ERVK -1 326 1 4 755 4938 76 14 16 chr15 22292753 22293461 -81201513 - IAPEz-int LTR ERVK 0 6481 5775 4 755 3009 17 0 0 chr15 22293461 22293821 -81201153 - IAPEz-int LTR ERVK -2121 4360 4001 4 755 11288 72 75 52 chr15 22293819 22296525 -81198449 - IAPEz-int LTR ERVK -3707 2774 9 4 755 2191 80 51 3 chr15 22296526 22296838 -81198136 - IAPLTR2b LTR ERVK 0 327 1 4 755 8700 144 56 32 chr15 22296838 22299211 -81195763 - L1Md_F LINE L1 -3327 2556 217 4 755 1328 229 87 18 chr15 22299211 22299545 -81195429 - ORR1B1 LTR MaLR -33 361 5 4 755 645 286 132 65 chr15 22299544 22299854 -81195120 - MER67C LTR ERV1 -321 390 60 4 755 484 135 14 0 chr15 22300377 22300451 -81194523 + tRNA-Lys-AAG tRNA tRNA 2 76 0 4 755 2089 234 20 110 chr15 22300469 22301113 -81193861 - RMER13B LTR ERVK -12 896 311 4 755 1208 199 129 103 chr15 22301088 22301563 -81193411 - RMER17B LTR ERVK -519 439 1 4 755 270 330 41 51 chr15 22302023 22302218 -81192756 - B3A SINE B2 -2 196 4 4 755 291 183 33 0 chr15 22302371 22302431 -81192543 + Lx9 LINE L1 7007 7068 -576 4 755 672 240 121 24 chr15 22302424 22302672 -81192302 + Lx9 LINE L1 7213 7484 -160 4 755 4811 191 37 38 chr15 22302672 22304277 -81190697 - ORR1B1-int LTR MaLR 0 1792 8 4 755 572 192 79 65 chr15 22304277 22304416 -81190558 - MT2B LTR ERVL -279 322 182 4 755 789 228 20 49 chr15 22304410 22304654 -81190320 - ORR1A3-int LTR MaLR -350 1613 1377 4 755 279 240 40 40 chr15 22304657 22304757 -81190217 - ORR1A3-int LTR MaLR -1245 718 619 4 755 527 174 0 0 chr15 22304668 22304760 -81190214 - MT2B LTR ERVL -507 94 3 4 755 265 79 0 0 chr15 22304766 22304804 -81190170 - MERVL_2A-int LTR ERVL -5 5756 5719 4 755 377 235 9 47 chr15 22304804 22304911 -81190063 - ORR1A3-int LTR MaLR -1323 640 538 4 755 31 82 0 0 chr15 22305915 22305988 -81188986 + AT_rich Low_complexity Low_complexity 1 73 0 4 755 1042 102 7 7 chr15 22306074 22306222 -81188752 - B1_Mus1 SINE Alu 0 148 1 4 755 295 290 155 0 chr15 22306276 22306431 -81188543 - L1_Mur3 LINE L1 -87 5793 5615 4 755 2831 190 49 12 chr15 22306912 22307481 -81187493 - Lx5 LINE L1 -173 6877 6288 4 755 2639 179 20 2 chr15 22307481 22307990 -81186984 - Lx4A LINE L1 -234 6824 6307 4 755 9475 184 53 27 chr15 22307988 22308921 -81186053 - L1_Mur2 LINE L1 -128 5749 4808 4 755 2988 74 15 5 chr15 22308921 22309317 -81185657 - MTB LTR MaLR 0 400 1 4 755 9475 184 53 27 chr15 22309317 22310668 -81184306 - L1_Mur2 LINE L1 -1070 4807 3406 4 755 840 162 11 26 chr15 22310666 22310856 -81184118 - L1_Mur2 LINE L1 -4443 1434 1248 4 755 7963 50 0 1 chr15 22310893 22312473 -81182501 - L1Md_F3 LINE L1 -14 6570 4993 4 755 306 191 37 19 chr15 22312458 22312565 -81182409 - L1_Mur2 LINE L1 -5824 1262 1154 4 755 968 65 0 0 chr15 22312582 22312705 -81182269 - B1_Mus1 SINE Alu -1 147 25 4 755 783 243 9 5 chr15 22312725 22312944 -81182030 - L1_Mur2 LINE L1 -5949 1137 918 4 755 403 223 55 0 chr15 22313326 22313492 -81181482 - L1_Mur2 LINE L1 -5440 1284 1110 4 755 2750 45 3 0 chr15 22313594 22313925 -81181049 - IAPEY3_LTR LTR ERVK 0 332 1 4 755 633 364 70 40 chr15 22313960 22314489 -81180485 - MLT1J-int LTR MaLR -692 695 151 4 755 383 168 103 21 chr15 22314736 22314833 -81180141 + MER2 DNA MER2_type 101 205 -140 4 755 624 27 0 0 chr15 22315009 22315083 -81179891 + (GGAA)n Simple_repeat Simple_repeat 4 77 0 4 755 203 79 26 0 chr15 22315240 22315278 -81179696 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 755 333 0 0 0 chr15 22315760 22315797 -81179177 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 755 960 76 23 23 chr15 22317552 22317727 -81177247 + (TAGA)n Simple_repeat Simple_repeat 3 177 0 4 755 5900 141 41 2 chr15 22318027 22319028 -81175946 - Lx2 LINE L1 0 6997 5958 4 755 271 183 0 40 chr15 22319552 22319626 -81175348 + CT-rich Low_complexity Low_complexity 2 72 0 4 755 34 65 0 0 chr15 22320733 22320795 -81174179 + AT_rich Low_complexity Low_complexity 1 62 0 4 755 21 57 0 0 chr15 22321091 22321126 -81173848 + AT_rich Low_complexity Low_complexity 1 35 0 4 755 300 274 12 0 chr15 22321727 22321811 -81173163 + MTEb LTR MaLR 107 191 -168 4 755 275 205 0 25 chr15 22321811 22321891 -81173083 + CT-rich Low_complexity Low_complexity 3 80 0 4 755 462 309 47 35 chr15 22321910 22322081 -81172893 + MTEb LTR MaLR 201 373 -6 4 755 1196 41 0 7 chr15 22322081 22322229 -81172745 + B1_Mm SINE Alu 1 147 0 4 755 225 0 0 0 chr15 22322229 22322254 -81172720 + (A)n Simple_repeat Simple_repeat 1 25 0 4 755 227 331 108 86 chr15 22322309 22322358 -81172616 + MLT1D LTR MaLR 318 360 -145 4 755 2952 57 2 70 chr15 22322358 22322774 -81172200 - RLTR10 LTR ERVK -2 388 1 4 755 227 331 108 86 chr15 22322774 22322863 -81172111 + MLT1D LTR MaLR 361 459 -46 4 755 326 300 110 0 chr15 22323331 22323431 -81171543 + ID_B1 SINE B4 4 114 -110 4 755 24 53 0 0 chr15 22324604 22324642 -81170332 + AT_rich Low_complexity Low_complexity 1 38 0 4 755 3564 32 121 0 chr15 22324648 22325088 -81169886 + MT2_Mm LTR ERVL 1 493 0 4 755 7947 111 5 9 chr15 22325456 22326396 -81168578 + L1VL1 LINE L1 217 960 -5678 4 755 4391 37 2 0 chr15 22326396 22326913 -81168061 + L1Md_T LINE L1 6065 6582 0 4 755 7947 107 10 4 chr15 22326913 22328487 -81166487 + L1VL1 LINE L1 961 2546 -3337 4 755 6588 90 16 20 chr15 22328486 22328786 -81166188 + L1_Mus1 LINE L1 5550 5862 -21 4 755 222 37 0 0 chr15 22328786 22328813 -81166161 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 755 6588 90 13 18 chr15 22328813 22329535 -81165439 + L1_Mus1 LINE L1 5863 6567 0 4 755 1281 216 38 24 chr15 22330217 22330587 -81164387 - Lx4B LINE L1 -1 7057 6683 4 755 343 322 163 50 chr15 22330661 22330900 -81164074 + MLT1A0 LTR MaLR 31 297 -68 4 755 1214 55 0 0 chr15 22330900 22331046 -81163928 - B1_Mus2 SINE Alu -1 146 1 4 755 343 322 163 50 chr15 22331046 22331107 -81163867 + MLT1A0 LTR MaLR 298 365 0 4 755 1667 34 5 0 chr15 22331484 22331688 -81163286 - MTA_Mm LTR MaLR -191 205 1 4 755 3735 199 22 37 chr15 22331690 22332664 -81162310 + MusHAL1 LINE L1 1029 1987 -725 5 755 11041 194 32 7 chr15 22332653 22335719 -81159255 + Lx2B LINE L1 3588 6739 -261 5 755 334 241 226 6 chr15 22335713 22335872 -81159102 + Lx2B LINE L1 6865 7058 0 5 755 28 0 0 0 chr15 22335874 22335902 -81159072 + AT_rich Low_complexity Low_complexity 1 28 0 5 755 525 374 116 69 chr15 22335922 22337193 -81157781 + MLT-int LTR MaLR 406 1735 0 5 755 26 0 0 0 chr15 22338112 22338138 -81156836 + AT_rich Low_complexity Low_complexity 1 26 0 5 755 2715 199 58 73 chr15 22338290 22338979 -81155995 - RMER6C LTR ERVK -2 688 10 5 755 335 73 18 0 chr15 22339864 22339919 -81155055 + (TTTTG)n Simple_repeat Simple_repeat 5 60 0 5 755 459 0 0 0 chr15 22340393 22340444 -81154530 + (GGAA)n Simple_repeat Simple_repeat 1 51 0 5 755 989 103 17 6 chr15 22340458 22340634 -81154340 + (GGGGA)n Simple_repeat Simple_repeat 1 178 0 5 755 1557 34 0 0 chr15 22340636 22340876 -81154098 + (GGGAA)n Simple_repeat Simple_repeat 1 240 0 5 755 840 20 0 0 chr15 22340877 22340975 -81153999 + (GGAAA)n Simple_repeat Simple_repeat 1 98 0 5 755 385 331 8 0 chr15 22340977 22341101 -81153873 - Lx6 LINE L1 -146 7314 7190 5 755 4708 139 25 7 chr15 22341108 22341612 -81153362 + Lx2 LINE L1 6173 6687 -310 5 755 186 43 0 0 chr15 22341612 22341635 -81153339 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 5 755 4708 139 25 7 chr15 22341635 22341902 -81153072 + Lx2 LINE L1 6688 6957 -40 5 755 712 281 35 101 chr15 22341916 22342233 -81152741 - Lx5 LINE L1 -238 6812 6517 5 755 445 211 181 31 chr15 22343913 22344040 -81150934 + B1_Mur1 SINE Alu 3 148 -1 5 755 1188 331 144 25 chr15 22344079 22344792 -81150182 - MTE-int LTR MaLR -711 869 72 5 755 475 206 43 0 chr15 22345577 22345669 -81149305 - MTC LTR MaLR -5 416 321 5 755 23 54 0 0 chr15 22345669 22345706 -81149268 + AT_rich Low_complexity Low_complexity 1 37 0 5 755 969 60 0 0 chr15 22345710 22345826 -81149148 + L1Md_F2 LINE L1 6103 6218 -364 5 755 344 221 67 0 chr15 22345822 22345926 -81149048 - Lx2B LINE L1 -29 6971 6861 5 755 353 111 4 18 chr15 22345921 22345985 -81148989 + L1_Mur2 LINE L1 3864 3937 -1949 5 755 1426 203 33 0 chr15 22345985 22346261 -81148713 - MTC LTR MaLR -132 289 5 5 755 324 0 0 0 chr15 22347785 22347821 -81147153 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 755 201 303 15 0 chr15 22347911 22347977 -81146997 + CT-rich Low_complexity Low_complexity 3 69 0 5 755 23 0 0 0 chr15 22348291 22348314 -81146660 + AT_rich Low_complexity Low_complexity 1 23 0 5 755 21 36 0 0 chr15 22348439 22348467 -81146507 + AT_rich Low_complexity Low_complexity 1 28 0 5 755 437 294 49 138 chr15 22349380 22349771 -81145203 + MLT1B LTR MaLR 27 382 -8 5 755 23 0 0 0 chr15 22349948 22349971 -81145003 + AT_rich Low_complexity Low_complexity 1 23 0 5 755 563 347 122 27 chr15 22350367 22350699 -81144275 - MLT1C LTR MaLR -19 448 91 5 755 4704 44 25 2 chr15 22350699 22351289 -81143685 + L1Md_F3 LINE L1 5980 6583 -1 5 755 563 347 122 27 chr15 22351289 22351365 -81143609 - MLT1C LTR MaLR -377 90 1 5 755 700 338 49 14 chr15 22351594 22352246 -81142728 + L1MA4 LINE L1 5257 5932 -359 5 755 610 272 95 9 chr15 22352370 22352708 -81142266 - Lx9 LINE L1 0 7644 7278 5 755 278 271 63 22 chr15 22353296 22353410 -81141564 - MLT1A0 LTR MaLR -6 402 236 5 755 5683 162 47 5 chr15 22353545 22354584 -81140390 + Lx2 LINE L1 5915 6997 0 5 755 258 32 0 0 chr15 22356085 22356116 -81138858 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5 755 3066 132 2 24 chr15 22356121 22356626 -81138348 - Lx3A LINE L1 -6 6975 6482 5 755 4239 116 14 58 chr15 22356626 22357454 -81137520 + Lx3_Mus LINE L1 4826 5450 -436 5 755 1648 84 13 0 chr15 22357454 22357681 -81137293 + L1_Mus1 LINE L1 6338 6567 0 5 755 6205 125 11 40 chr15 22357681 22358768 -81136206 + Lx3_Mus LINE L1 5443 6497 -512 5 755 265 291 0 0 chr15 22358855 22358934 -81136040 - PB1D10 SINE Alu -7 110 32 5 755 243 225 31 133 chr15 22359184 22359312 -81135662 - L1M2 LINE L1 -516 5775 5661 5 755 461 194 210 19 chr15 22359296 22359501 -81135473 - Lx7 LINE L1 -4 7692 7449 5 755 1235 278 41 7 chr15 22359529 22359945 -81135029 - Lx7 LINE L1 -1487 6209 5780 5 755 941 271 249 16 chr15 22359983 22360470 -81134504 - Lx6 LINE L1 -306 7154 6555 5 755 330 258 75 0 chr15 22360482 22360575 -81134399 - RLTR40 LTR ERVK -716 101 2 5 755 297 293 39 48 chr15 22360806 22360910 -81134064 - B1F SINE Alu 0 149 47 5 755 286 274 21 0 chr15 22362125 22362205 -81132769 + PB1D7 SINE Alu 5 88 -61 5 755 602 348 99 25 chr15 22362772 22363214 -81131760 - Lx8 LINE L1 -147 7326 6852 5 755 568 337 43 46 chr15 22363217 22363562 -81131412 + Lx8 LINE L1 6403 6746 -727 5 755 246 62 0 0 chr15 22363701 22363733 -81131241 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 755 245 258 79 0 chr15 22363876 22363965 -81131009 - Lx9 LINE L1 -11 7633 7538 5 755 234 240 0 0 chr15 22363985 22364035 -81130939 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 755 4313 190 98 41 chr15 22364103 22365142 -81129832 + RLTR25A LTR ERVK 6 1103 0 5 755 281 246 14 0 chr15 22365142 22365211 -81129763 - Lx9 LINE L1 -221 7423 7354 5 755 526 353 20 0 chr15 22366413 22366617 -81128357 + ID_B1 SINE B4 2 209 -15 5 755 485 198 8 0 chr15 22366644 22366770 -81128204 + (TA)n Simple_repeat Simple_repeat 1 127 0 5 755 207 59 0 105 chr15 22366946 22367003 -81127971 + T-rich Low_complexity Low_complexity 5 55 0 5 755 655 223 103 13 chr15 22367325 22367557 -81127417 + Lx9 LINE L1 7385 7637 -7 5 755 2092 115 40 29 chr15 22368282 22368630 -81126344 - Lx2 LINE L1 -1 6996 6645 5 755 517 184 101 0 chr15 22368786 22368895 -81126079 - RLTR11A2 LTR ERVK -406 121 2 5 755 632 221 33 105 chr15 22368960 22369323 -81125651 - Lx7 LINE L1 -1 7695 7359 5 755 459 48 0 0 chr15 22369354 22369416 -81125558 + (CAA)n Simple_repeat Simple_repeat 2 63 0 5 755 1389 267 51 75 chr15 22369445 22370134 -81124840 - Lx7 LINE L1 -1287 6409 5738 5 755 2703 201 37 41 chr15 22370132 22370493 -81124481 - L1_Mur3 LINE L1 -3015 2865 2503 5 755 3852 129 5 0 chr15 22370493 22371074 -81123900 - MT2B2 LTR ERVL 0 584 1 5 755 2703 201 37 41 chr15 22371074 22371437 -81123537 - L1_Mur3 LINE L1 -3378 2502 2144 5 755 252 256 45 34 chr15 22371428 22371517 -81123457 - L1_Mur3 LINE L1 -6789 939 850 5 755 974 219 65 108 chr15 22371545 22371822 -81123152 + RMER19C LTR ERVK 1 265 -346 5 755 523 315 71 18 chr15 22371826 22372107 -81122867 - L1_Mur3 LINE L1 -6908 820 525 5 755 513 0 0 0 chr15 22372107 22372164 -81122810 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 755 441 354 72 58 chr15 22372346 22372915 -81122059 + MLT2B3 LTR ERVL 165 695 -22 5 755 22 35 0 0 chr15 22373064 22373093 -81121881 + AT_rich Low_complexity Low_complexity 1 29 0 5 755 2908 173 40 59 chr15 22373869 22374464 -81120510 + RLTR25B LTR ERVK 7 590 -438 5 755 1327 80 6 0 chr15 22374614 22374790 -81120184 + B2_Mm1a SINE B2 1 177 -16 5 755 1130 105 0 6 chr15 22374790 22374963 -81120011 + (GAAA)n Simple_repeat Simple_repeat 2 173 0 5 755 502 259 60 0 chr15 22374964 22375080 -81119894 + ETnERV2-int LTR ERVK 7070 7192 -214 5 755 33715 91 8 7 chr15 22375420 22381581 -81113393 - L1Md_F2 LINE L1 -1 6581 420 5 755 351 324 17 6 chr15 22381854 22382034 -81112940 + RMER16-int LTR ERVK 185 366 -6878 5 755 441 0 0 0 chr15 22382179 22382228 -81112746 + (GA)n Simple_repeat Simple_repeat 1 49 0 5 755 1826 170 162 45 chr15 22382228 22382715 -81112259 + RMER16-int LTR ERVK 268 811 -4595 5 755 668 224 16 0 chr15 22382727 22382852 -81112122 + ETnERV2-int LTR ERVK 7070 7196 -210 5 755 343 282 49 38 chr15 22383416 22383600 -81111374 + RLTR45-int LTR ERVK 181 366 -6878 5 755 1832 184 124 18 chr15 22383749 22384256 -81110718 + RMER16-int LTR ERVK 192 671 -4735 5 755 454 191 133 0 chr15 22384259 22384364 -81110610 + RMER16-int LTR ERVK 938 1056 -5081 5 755 1169 248 56 21 chr15 22384381 22384669 -81110305 + RLTR45-int LTR ERVK 2454 2751 -4655 5 755 4560 124 16 17 chr15 22384697 22385403 -81109571 + RLTR45-int LTR ERVK 3567 4271 -3135 5 755 4692 156 84 105 chr15 22385405 22386630 -81108344 + RLTR45-int LTR ERVK 4873 6071 -1173 5 755 750 292 22 15 chr15 22386632 22386987 -81107987 + RLTR45-int LTR ERVK 7506 7828 -389 5 755 4483 169 14 3 chr15 22387015 22387717 -81107257 + ETnERV2-int LTR ERVK 6493 7202 -204 5 755 229 325 8 81 chr15 22387981 22388105 -81106869 + RNLTR23 LTR ERVK 528 642 0 5 755 453 125 268 10 chr15 22388110 22388207 -81106767 + RMER16-int LTR ERVK 1089 1210 -4196 5 755 403 243 197 58 chr15 22388219 22388407 -81106567 + ETnERV2-int LTR ERVK 2454 2667 -4739 5 755 8745 153 41 45 chr15 22388394 22389459 -81105515 + ETnERV2-int LTR ERVK 2979 4055 -3351 5 755 6142 54 20 0 chr15 22389459 22390238 -81104736 + L1Md_F2 LINE L1 5775 6569 -13 5 755 8745 153 41 45 chr15 22390238 22390879 -81104095 + ETnERV2-int LTR ERVK 4056 4679 -2727 5 755 2771 89 33 5 chr15 22390877 22391273 -81103701 + ETnERV2-int LTR ERVK 5356 5762 -1644 5 755 3068 173 95 85 chr15 22391261 22392074 -81102900 + ETnERV2-int LTR ERVK 4670 5490 -1754 5 755 585 357 42 44 chr15 22392480 22393002 -81101972 + MuRRS4-int LTR ERV1 4366 4886 -177 5 755 1304 291 17 17 chr15 22392665 22393081 -81101893 + RNERVK23-int LTR ERVK 7411 7826 -391 5 755 3766 156 5 19 chr15 22393112 22393686 -81101288 + ETnERV2-int LTR ERVK 6494 7059 -347 5 755 1157 311 67 62 chr15 22393713 22394780 -81100194 + L1_Rod LINE L1 4461 5532 -315 5 755 291 241 25 17 chr15 22394907 22395025 -81099949 + Lx9 LINE L1 7478 7596 -48 5 755 1054 291 101 26 chr15 22395135 22395512 -81099462 - RLTR18B LTR ERVK 0 512 108 5 755 7394 179 31 14 chr15 22395657 22395917 -81099057 + L1_Mur2 LINE L1 2373 2623 -3254 5 755 3545 46 0 0 chr15 22395917 22396348 -81098626 - L1Md_F2 LINE L1 -14 6568 6138 5 755 7394 179 31 14 chr15 22396348 22397618 -81097356 + L1_Mur2 LINE L1 2624 3929 -1948 5 755 2881 115 76 6 chr15 22398571 22399043 -81095931 + Lx3B LINE L1 6467 6971 -2 5 755 225 0 0 0 chr15 22399048 22399073 -81095901 + (TAA)n Simple_repeat Simple_repeat 1 25 0 5 755 270 330 9 28 chr15 22399198 22399307 -81095667 - RMER4A LTR ERVK -352 114 8 5 755 180 0 0 0 chr15 22399433 22399453 -81095521 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 5 755 1705 100 42 4 chr15 22400443 22400703 -81094271 - Lx3A LINE L1 -3 6978 6709 5 755 1689 131 31 72 chr15 22400703 22401023 -81093951 + Lx3_Mus LINE L1 6372 6678 -331 5 755 28 48 0 0 chr15 22401024 22401066 -81093908 + AT_rich Low_complexity Low_complexity 1 42 0 5 755 641 165 90 79 chr15 22401118 22401296 -81093678 + ORR1B2 LTR MaLR 1 180 -198 5 755 212 217 16 16 chr15 22401297 22401358 -81093616 + CT-rich Low_complexity Low_complexity 2 62 0 5 755 866 222 22 86 chr15 22401359 22401581 -81093393 + ORR1B2 LTR MaLR 160 367 0 5 755 518 365 64 17 chr15 22402094 22402392 -81092582 + MTD LTR MaLR 1 312 -107 5 755 4326 125 43 6 chr15 22402403 22403382 -81091592 - L1_Mus1 LINE L1 -5 7053 5702 5 755 2680 73 0 17 chr15 22403382 22403744 -81091230 + L1_Mus1 LINE L1 6193 6548 -19 5 755 2315 206 40 6 chr15 22403756 22404250 -81090724 - Lx4B LINE L1 -453 6605 6095 6 755 303 42 0 0 chr15 22404282 22404330 -81090644 + L1Md_F2 LINE L1 6532 6579 -3 6 755 720 287 84 45 chr15 22404388 22404720 -81090254 + Lx9 LINE L1 6866 7210 -434 6 755 654 146 0 0 chr15 22404722 22404832 -81090142 + (TA)n Simple_repeat Simple_repeat 1 110 0 6 755 247 286 0 0 chr15 22404832 22404902 -81090072 + Lx9 LINE L1 7202 7271 -373 6 755 768 253 112 27 chr15 22404903 22405126 -81089848 - MTD LTR MaLR 0 419 178 6 755 480 18 0 0 chr15 22405133 22405190 -81089784 + (TAG)n Simple_repeat Simple_repeat 2 58 0 6 755 375 41 0 0 chr15 22405193 22405242 -81089732 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 755 23 33 0 0 chr15 22405826 22405856 -81089118 + AT_rich Low_complexity Low_complexity 1 30 0 6 755 197 132 26 0 chr15 22406117 22406155 -81088819 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 6 755 363 280 33 70 chr15 22406319 22406531 -81088443 - MTD LTR MaLR -15 404 166 6 755 204 198 54 0 chr15 22406534 22406645 -81088329 + (CAGAGA)n Simple_repeat Simple_repeat 2 118 0 6 755 269 384 35 9 chr15 22406645 22406758 -81088216 - MTD LTR MaLR -168 191 76 6 755 21 36 0 0 chr15 22406891 22406919 -81088055 + AT_rich Low_complexity Low_complexity 1 28 0 6 755 391 307 92 13 chr15 22406944 22407096 -81087878 - RSINE1 SINE B4 0 165 2 6 755 30 0 0 0 chr15 22407103 22407133 -81087841 + AT_rich Low_complexity Low_complexity 1 30 0 6 755 534 57 0 0 chr15 22408111 22408181 -81086793 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 755 320 294 14 98 chr15 22408594 22408737 -81086237 + B4 SINE B4 16 146 -146 6 755 501 17 0 0 chr15 22408768 22408826 -81086148 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 755 474 88 0 0 chr15 22408826 22408893 -81086081 + (CA)n Simple_repeat Simple_repeat 1 68 0 6 755 24 0 0 0 chr15 22408909 22408933 -81086041 + AT_rich Low_complexity Low_complexity 1 24 0 6 755 1009 269 52 20 chr15 22409030 22409332 -81085642 - ORR1D2 LTR MaLR -53 326 2 6 755 426 306 0 0 chr15 22409572 22409716 -81085258 + L1M3 LINE L1 4175 4318 -1822 6 755 31 0 0 0 chr15 22409932 22409963 -81085011 + AT_rich Low_complexity Low_complexity 1 31 0 6 755 182 128 26 0 chr15 22409966 22410005 -81084969 + (TATG)n Simple_repeat Simple_repeat 1 40 0 6 755 247 327 45 9 chr15 22410358 22410469 -81084505 + RMER15 LTR ERVL 406 520 -55 6 755 380 276 19 75 chr15 22410568 22410674 -81084300 - RSINE1 SINE B4 -39 126 27 6 755 318 255 87 75 chr15 22410774 22410889 -81084085 + L1M2 LINE L1 3114 3238 -2905 6 755 723 104 0 0 chr15 22410889 22410995 -81083979 + (GA)n Simple_repeat Simple_repeat 2 107 0 6 755 318 255 87 75 chr15 22410995 22411040 -81083934 + L1M2 LINE L1 3239 3276 -2867 6 755 360 330 87 32 chr15 22411277 22411496 -81083478 - Lx8 LINE L1 -164 7309 7079 6 755 252 0 0 0 chr15 22411513 22411541 -81083433 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 755 402 39 0 0 chr15 22411541 22411592 -81083382 + (GA)n Simple_repeat Simple_repeat 1 52 0 6 755 186 167 0 0 chr15 22412337 22412373 -81082601 + T-rich Low_complexity Low_complexity 4 39 0 6 755 250 351 20 7 chr15 22412629 22412781 -81082193 - Charlie20a DNA Charlie -189 618 465 6 755 567 296 5 104 chr15 22412963 22413108 -81081866 - RMER5 LTR ERV1 0 534 394 6 94 1671 165 21 45 chr15 22413108 22413445 -81081529 + ORR1A4 LTR MaLR 1 329 0 6 756 567 296 5 104 chr15 22413445 22413521 -81081453 - RMER5 LTR ERV1 -141 393 335 6 756 1537 195 46 25 chr15 22413530 22413856 -81081118 + RMER10A LTR ERVL 1 333 -109 6 756 565 146 0 0 chr15 22414328 22414424 -81080550 + RMER10A LTR ERVL 334 429 -13 6 756 586 301 36 120 chr15 22414451 22414810 -81080164 - RMER5 LTR ERV1 -205 329 1 6 756 1152 119 0 0 chr15 22414920 22415097 -81079877 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 6 756 596 264 22 11 chr15 22415866 22416050 -81078924 + Lx9 LINE L1 7088 7273 -371 6 756 486 0 0 0 chr15 22416316 22416370 -81078604 + (GAAA)n Simple_repeat Simple_repeat 1 54 0 6 756 719 125 9 0 chr15 22416538 22416650 -81078324 - B1_Mus1 SINE Alu -35 113 1 6 756 24 32 0 0 chr15 22416693 22416724 -81078250 + AT_rich Low_complexity Low_complexity 1 31 0 6 756 916 198 36 37 chr15 22416819 22417086 -81077888 - ORR1C1 LTR MaLR 0 378 1 6 756 25 31 0 0 chr15 22417086 22417118 -81077856 + AT_rich Low_complexity Low_complexity 1 32 0 6 756 375 303 18 9 chr15 22417350 22417460 -81077514 + B3A SINE B2 5 115 -83 6 756 471 35 0 0 chr15 22417496 22417553 -81077421 + (CA)n Simple_repeat Simple_repeat 1 57 0 6 756 32 0 0 0 chr15 22417583 22417615 -81077359 + AT_rich Low_complexity Low_complexity 1 32 0 6 756 35115 49 0 7 chr15 22417622 22423110 -81071864 + L1Md_T LINE L1 44 5589 -297 6 756 8336 37 0 0 chr15 22423110 22424106 -81070868 + L1Md_T LINE L1 5590 6585 0 6 756 5552 84 1 1 chr15 22424544 22425280 -81069694 + L1_Mus2 LINE L1 5831 6566 0 6 756 243 338 40 0 chr15 22426134 22426208 -81068766 - B3A SINE B2 -121 77 1 6 756 1164 138 21 0 chr15 22429548 22429737 -81065237 - B2_Mm2 SINE B2 -2 193 1 6 756 2275 110 3 28 chr15 22429939 22430302 -81064672 + L1Md_F2 LINE L1 6229 6582 0 6 756 1957 215 120 6 chr15 22431285 22431767 -81063207 + Lx2B LINE L1 6464 7000 0 6 756 452 311 122 29 chr15 22431975 22432147 -81062827 + B3 SINE B2 2 189 -27 6 756 195 129 0 0 chr15 22432148 22432179 -81062795 + (TA)n Simple_repeat Simple_repeat 1 31 0 6 756 1072 280 134 34 chr15 22432257 22432551 -81062423 + MTD LTR MaLR 1 329 -90 6 756 1393 118 0 21 chr15 22432551 22432785 -81062189 - Lx LINE L1 -1 6653 6425 6 756 1072 280 134 34 chr15 22432785 22432871 -81062103 + MTD LTR MaLR 330 419 0 6 756 317 305 114 0 chr15 22432871 22432976 -81061998 + RSINE1 SINE B4 14 130 -35 6 756 351 65 0 0 chr15 22432985 22433031 -81061943 + (CCCCCT)n Simple_repeat Simple_repeat 4 49 0 6 756 219 95 23 23 chr15 22433035 22433078 -81061896 + (TC)n Simple_repeat Simple_repeat 2 44 0 6 756 1083 64 35 7 chr15 22433505 22433647 -81061327 + B1_Mus2 SINE Alu 1 146 -1 6 756 242 106 21 0 chr15 22433652 22433699 -81061275 + (CAAAAA)n Simple_repeat Simple_repeat 4 51 0 6 756 23 68 0 0 chr15 22433798 22433842 -81061132 + AT_rich Low_complexity Low_complexity 1 44 0 6 756 1233 82 29 0 chr15 22434664 22434834 -81060140 - B2_Mm2 SINE B2 -19 176 2 6 756 308 371 18 36 chr15 22435412 22435577 -81059397 - B3 SINE B2 -30 186 25 6 756 230 374 60 70 chr15 22436214 22436499 -81058475 - RLTR26 LTR ERVK -190 452 171 6 756 24 53 0 0 chr15 22437181 22437219 -81057755 + AT_rich Low_complexity Low_complexity 1 38 0 6 756 26 93 0 0 chr15 22437708 22437783 -81057191 + AT_rich Low_complexity Low_complexity 1 75 0 6 756 423 335 32 14 chr15 22439253 22439474 -81055500 - Lx8 LINE L1 -723 6750 6526 6 756 402 85 0 0 chr15 22439750 22439809 -81055165 + (TG)n Simple_repeat Simple_repeat 1 59 0 6 756 405 311 40 24 chr15 22439836 22439961 -81055013 - RSINE1 SINE B4 -36 129 3 6 756 355 322 96 34 chr15 22440538 22440747 -81054227 + ID_B1 SINE B4 2 223 -1 6 756 205 265 0 30 chr15 22440760 22440861 -81054113 + GA-rich Low_complexity Low_complexity 2 99 0 6 756 454 271 114 7 chr15 22441661 22441892 -81053082 + L1MA6 LINE L1 5712 5964 -339 6 756 2389 127 8 18 chr15 22441892 22442286 -81052688 + Lx3A LINE L1 6585 6974 -7 6 756 323 281 33 69 chr15 22442286 22442367 -81052607 + L1MA6 LINE L1 5965 6036 -267 6 756 879 180 0 6 chr15 22442431 22442599 -81052375 + Lx LINE L1 6488 6654 0 6 756 216 0 0 0 chr15 22443569 22443593 -81051381 + (TTA)n Simple_repeat Simple_repeat 3 26 0 6 756 275 49 0 24 chr15 22443936 22443978 -81050996 + (TTA)n Simple_repeat Simple_repeat 1 41 0 6 756 6018 234 37 13 chr15 22443983 22444938 -81050036 - Lx5 LINE L1 -20 7030 6051 6 756 1107 95 0 0 chr15 22444938 22445096 -81049878 + (TTTC)n Simple_repeat Simple_repeat 2 159 0 6 756 2839 87 0 0 chr15 22445099 22445478 -81049496 - L1_Mus1 LINE L1 -3 6564 6186 6 756 6018 194 36 4 chr15 22445478 22446283 -81048691 - Lx5 LINE L1 -1000 6050 5217 6 756 4300 57 2 0 chr15 22446280 22446820 -81048154 - L1Md_F2 LINE L1 -450 6132 5592 6 756 1504 95 0 14 chr15 22446821 22447035 -81047939 + L1Md_F2 LINE L1 6353 6563 -19 6 756 546 16 0 0 chr15 22447035 22447098 -81047876 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 6 756 803 164 0 1 chr15 22447100 22447242 -81047732 - L1_Mur2 LINE L1 -884 5262 5101 6 756 575 344 88 22 chr15 22447697 22448015 -81046959 - MTEb LTR MaLR -25 354 16 6 756 628 319 62 14 chr15 22448026 22448236 -81046738 - MTEb-int LTR MaLR 0 1580 1361 6 756 516 59 0 0 chr15 22448488 22448556 -81046418 + (TA)n Simple_repeat Simple_repeat 2 69 0 6 756 285 392 10 10 chr15 22448608 22448711 -81046263 - MTEb-int LTR MaLR -602 768 666 6 756 291 320 55 60 chr15 22449590 22449773 -81045201 - MTEb-int LTR MaLR -1075 505 324 6 756 1671 282 27 23 chr15 22449796 22450283 -81044691 - Lx6 LINE L1 -27 7433 6945 6 756 663 294 57 26 chr15 22450445 22450672 -81044302 + Lx5 LINE L1 6815 7048 -2 6 756 245 0 86 0 chr15 22450676 22450711 -81044263 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 6 756 490 242 55 73 chr15 22450725 22450890 -81044084 + Lx6 LINE L1 6703 6864 -596 6 756 818 292 107 24 chr15 22450894 22451231 -81043743 - MTEb-int LTR MaLR -1215 365 1 6 756 21 36 0 0 chr15 22451254 22451282 -81043692 + AT_rich Low_complexity Low_complexity 1 28 0 6 756 196 154 39 0 chr15 22451295 22451347 -81043627 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 756 207 0 0 0 chr15 22451383 22451406 -81043568 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 756 508 269 101 39 chr15 22451610 22451788 -81043186 - MTEb LTR MaLR -189 190 2 6 756 508 342 10 15 chr15 22451944 22452143 -81042831 - B3A SINE B2 0 198 1 6 756 216 67 0 0 chr15 22452676 22452706 -81042268 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 756 967 309 85 56 chr15 22454169 22454618 -81040356 + MT2A LTR ERVL 1 462 -71 6 756 225 94 0 0 chr15 22455097 22455129 -81039845 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 6 756 207 0 0 0 chr15 22455131 22455154 -81039820 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 756 519 213 48 32 chr15 22455155 22455281 -81039693 - B1_Mus1 SINE Alu -12 136 9 6 756 478 289 61 100 chr15 22455296 22455557 -81039417 - MT2B LTR ERVL -64 537 287 6 756 979 138 0 0 chr15 22457777 22457922 -81037052 + B1_Mus1 SINE Alu 2 146 -2 7 756 29 70 0 0 chr15 22458183 22458240 -81036734 + AT_rich Low_complexity Low_complexity 1 57 0 7 756 4858 67 6 6 chr15 22458281 22458925 -81036049 - L1Md_F2 LINE L1 0 6582 5939 7 756 7152 80 7 3 chr15 22459299 22460263 -81034711 + L1_Mus2 LINE L1 5598 6565 -1 7 756 1637 283 10 41 chr15 22460702 22461185 -81033789 - Lx6 LINE L1 -10 7450 6983 7 756 4141 67 0 2 chr15 22462615 22463151 -81031823 - L1_Mus1 LINE L1 0 6567 6033 7 756 414 100 0 0 chr15 22466535 22466595 -81028379 + (TG)n Simple_repeat Simple_repeat 2 61 0 7 756 403 191 124 26 chr15 22466609 22466722 -81028252 - Lx8 LINE L1 -1063 6410 6287 7 756 315 329 55 37 chr15 22467231 22467255 -81027719 - B4A SINE B4 -44 248 86 7 756 455 319 44 7 chr15 22467255 22467391 -81027583 - B1_Mur1 SINE Alu -8 141 1 7 756 410 354 38 54 chr15 22467424 22467609 -81027365 - B3A SINE B2 0 216 35 7 756 309 360 51 39 chr15 22468775 22469087 -81025887 - L1M4c LINE L1 -2216 4166 3851 7 756 223 80 19 39 chr15 22469112 22469164 -81025810 + (TTTTTG)n Simple_repeat Simple_repeat 2 52 0 7 756 2732 30 3 0 chr15 22469626 22469962 -81025012 - ORR1A0 LTR MaLR -9 337 1 7 756 13124 65 21 3 chr15 22469962 22471723 -81023251 - ORR1A0-int LTR MaLR 0 1792 1 7 756 2913 43 0 0 chr15 22471723 22472069 -81022905 - ORR1A0 LTR MaLR 0 346 1 7 756 501 302 73 55 chr15 22472366 22472695 -81022279 - L1M4c LINE L1 -5335 1049 715 7 756 760 284 32 50 chr15 22473066 22473344 -81021630 - L1M4c LINE L1 -6089 295 23 7 756 1483 249 78 21 chr15 22473390 22473775 -81021199 - MTD LTR MaLR -3 416 10 7 756 1308 241 51 14 chr15 22474222 22474592 -81020382 - ORR1C2 LTR MaLR 0 384 1 7 756 243 220 17 0 chr15 22475189 22475248 -81019726 + (TA)n Simple_repeat Simple_repeat 2 61 0 7 756 321 26 0 0 chr15 22475786 22475824 -81019150 + (TTA)n Simple_repeat Simple_repeat 2 39 0 7 756 690 13 0 0 chr15 22478719 22478798 -81016176 + (GA)n Simple_repeat Simple_repeat 2 80 0 7 756 228 67 0 0 chr15 22481216 22481246 -81013728 + (TTC)n Simple_repeat Simple_repeat 1 30 0 7 756 648 168 196 93 chr15 22482375 22482579 -81012395 + URR1B DNA MER1_type 1 225 0 7 756 579 112 0 0 chr15 22482928 22483026 -81011948 + (TG)n Simple_repeat Simple_repeat 1 98 0 7 756 402 106 35 0 chr15 22483304 22483389 -81011585 - Lx4A LINE L1 0 7058 6971 7 756 810 191 7 0 chr15 22483384 22483531 -81011443 + Lx4A LINE L1 6690 6837 -221 7 756 255 333 45 11 chr15 22483542 22483630 -81011344 - B4A SINE B4 -197 95 5 7 756 525 292 19 144 chr15 22483825 22484033 -81010941 - B3 SINE B2 -9 186 5 7 756 25 31 0 0 chr15 22484038 22484070 -81010904 + AT_rich Low_complexity Low_complexity 1 32 0 7 756 7245 119 25 34 chr15 22484624 22485863 -81009111 - Lx3C LINE L1 -212 6764 5537 7 756 467 330 46 40 chr15 22486179 22486658 -81008316 - L1MC2 LINE L1 -373 5971 5490 7 756 332 186 82 0 chr15 22486686 22486783 -81008191 - Lx9 LINE L1 -2 7642 7538 7 756 21 36 0 0 chr15 22486973 22487001 -81007973 + AT_rich Low_complexity Low_complexity 1 28 0 7 756 1815 251 22 0 chr15 22487181 22487595 -81007379 - Lx9 LINE L1 -174 7470 7048 7 756 334 238 0 36 chr15 22487595 22487621 -81007353 + Lx9 LINE L1 6953 6978 -666 7 756 5008 140 61 29 chr15 22487621 22488549 -81006425 - RMER17B LTR ERVK 0 958 1 7 756 334 238 0 36 chr15 22488549 22488605 -81006369 + Lx9 LINE L1 6979 7032 -612 7 756 2233 185 20 22 chr15 22488794 22489248 -81005726 - RLTR11B LTR ERVK 0 453 1 7 756 396 138 0 0 chr15 22489656 22489721 -81005253 + (TCCC)n Simple_repeat Simple_repeat 3 67 0 7 756 459 0 0 0 chr15 22489826 22489877 -81005097 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 756 225 211 0 0 chr15 22490535 22490592 -81004382 + (TA)n Simple_repeat Simple_repeat 1 57 0 7 756 22 88 0 0 chr15 22492386 22492443 -81002531 + AT_rich Low_complexity Low_complexity 1 57 0 7 756 23 54 0 0 chr15 22492464 22492501 -81002473 + AT_rich Low_complexity Low_complexity 1 37 0 7 756 24 85 0 0 chr15 22493787 22493846 -81001128 + AT_rich Low_complexity Low_complexity 1 59 0 7 756 731 337 101 42 chr15 22493854 22494457 -81000517 + Lx8 LINE L1 6333 6971 -502 7 756 1391 206 0 0 chr15 22494462 22494729 -81000245 - RMER6C LTR ERVK 0 690 424 7 756 387 0 0 0 chr15 22494751 22494794 -81000180 + (TC)n Simple_repeat Simple_repeat 2 44 0 7 756 426 20 0 0 chr15 22494794 22494844 -81000130 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 756 896 166 306 20 chr15 22494848 22495090 -80999884 - RMER6C LTR ERVK -409 311 1 7 756 357 350 51 58 chr15 22495105 22495399 -80999575 + Lx8 LINE L1 6988 7279 -194 7 756 310 276 105 95 chr15 22495546 22495746 -80999228 + MTD LTR MaLR 1 202 -217 7 756 353 270 28 75 chr15 22495769 22495905 -80999069 + MTD LTR MaLR 251 405 -14 7 756 25 51 0 0 chr15 22496217 22496256 -80998718 + AT_rich Low_complexity Low_complexity 1 39 0 7 756 380 172 0 41 chr15 22496655 22496752 -80998222 + Lx LINE L1 6562 6654 0 7 756 242 290 16 16 chr15 22496771 22496834 -80998140 + RSINE1 SINE B4 103 165 0 7 756 355 34 68 0 chr15 22496835 22496894 -80998080 + (CAGAGA)n Simple_repeat Simple_repeat 2 64 0 7 756 1025 86 18 6 chr15 22498948 22499112 -80995862 + L1_Mus3 LINE L1 6473 6638 0 7 756 303 236 46 19 chr15 22499781 22499863 -80995111 + L1_Mur3 LINE L1 1523 1606 -4274 7 756 216 0 0 0 chr15 22499863 22499887 -80995087 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 756 303 236 46 19 chr15 22499887 22499912 -80995062 + L1_Mur3 LINE L1 1607 1633 -4247 7 756 588 106 0 0 chr15 22501070 22501164 -80993810 + (CA)n Simple_repeat Simple_repeat 1 94 0 1 756 1569 240 77 26 chr15 22501348 22501750 -80993224 + RLTR20B1 LTR ERVK 26 456 -107 2 756 420 77 0 0 chr15 22501750 22501815 -80993159 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 756 1569 235 76 27 chr15 22501815 22501893 -80993081 + RLTR20B1 LTR ERVK 457 547 -16 2 756 207 189 0 0 chr15 22503275 22503328 -80991646 + CT-rich Low_complexity Low_complexity 2 54 0 4 756 364 377 62 11 chr15 22503800 22503977 -80990997 + ID_B1 SINE B4 36 221 -3 5 756 282 340 78 26 chr15 22504115 22504308 -80990666 - Lx8 LINE L1 -28 7445 7243 6 756 402 316 136 43 chr15 22504310 22504796 -80990178 + Lx8 LINE L1 6707 7237 -236 6 756 2193 164 24 5 chr15 22504800 22505180 -80989794 - Lx2A1 LINE L1 -4 7004 6618 7 756 3346 153 189 22 chr15 22505866 22506640 -80988334 - RMER17A2 LTR ERVK -3 903 1 8 756 5340 132 41 52 chr15 22506648 22507550 -80987424 - RMER17A-int LTR ERVK -3 1725 797 8 756 2789 91 26 5 chr15 22507550 22507938 -80987036 - MTA_Mm LTR MaLR 0 396 1 9 756 5340 132 41 52 chr15 22507938 22508055 -80986919 - RMER17A-int LTR ERVK -932 796 717 8 756 363 63 31 16 chr15 22508309 22508373 -80986601 + (GA)n Simple_repeat Simple_repeat 1 65 0 1 756 598 200 63 14 chr15 22508373 22508515 -80986459 - RMER17A-int LTR ERVK -1577 151 3 8 756 1233 172 15 39 chr15 22508517 22508777 -80986197 - RMER17A2 LTR ERVK 0 809 556 8 756 286 203 14 0 chr15 22508751 22508825 -80986149 - RMER17A2 LTR ERVK -5 901 827 8 756 310 321 31 19 chr15 22508943 22509102 -80985872 - Lx8 LINE L1 -625 6848 6688 6 756 642 89 0 0 chr15 22509881 22509971 -80985003 + (TCC)n Simple_repeat Simple_repeat 1 90 0 1 756 305 191 16 0 chr15 22509971 22510034 -80984940 + CT-rich Low_complexity Low_complexity 2 65 0 1 756 24 32 0 0 chr15 22511492 22511523 -80983451 + AT_rich Low_complexity Low_complexity 1 31 0 1 756 488 59 0 14 chr15 22511927 22511996 -80982978 + (TA)n Simple_repeat Simple_repeat 1 68 0 1 756 992 178 11 0 chr15 22512770 22512944 -80982030 - ORR1B1 LTR MaLR -210 184 9 1 756 270 0 0 0 chr15 22513727 22513757 -80981217 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 756 579 15 0 0 chr15 22513757 22513824 -80981150 + (GA)n Simple_repeat Simple_repeat 1 68 0 1 756 22 0 0 0 chr15 22514060 22514082 -80980892 + AT_rich Low_complexity Low_complexity 1 22 0 1 756 1945 111 22 16 chr15 22515379 22515690 -80979284 - L1Md_F2 LINE L1 -4 6578 6266 1 756 561 64 0 0 chr15 22515788 22515866 -80979108 + (TG)n Simple_repeat Simple_repeat 2 79 0 2 756 362 45 0 0 chr15 22515925 22515969 -80979005 - HAL1-3A_ME LINE L1 -835 2023 1980 2 756 633 80 0 0 chr15 22515969 22516057 -80978917 + (GA)n Simple_repeat Simple_repeat 1 88 0 2 756 5724 102 19 4 chr15 22516426 22517260 -80977714 + L1_Mus3 LINE L1 5792 6638 0 2 756 3644 99 9 46 chr15 22517283 22517629 -80977345 - Lx LINE L1 -512 6142 5805 2 756 960 106 0 54 chr15 22517629 22517778 -80977196 + B1_Mus1 SINE Alu 2 142 -6 2 756 3644 99 9 46 chr15 22517778 22517789 -80977185 - Lx LINE L1 -850 5804 5804 2 756 569 83 12 0 chr15 22517789 22517873 -80977101 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 2 756 3644 99 9 46 chr15 22517873 22518075 -80976899 - Lx LINE L1 -850 5804 5603 2 756 3234 152 24 4 chr15 22518075 22518611 -80976363 + Lx LINE L1 6106 6652 -2 2 756 32 0 0 0 chr15 22518628 22518660 -80976314 + AT_rich Low_complexity Low_complexity 1 32 0 2 756 22 0 0 0 chr15 22519083 22519105 -80975869 + AT_rich Low_complexity Low_complexity 1 22 0 3 756 363 182 105 35 chr15 22519181 22519295 -80975679 + RLTR31A_Mm LTR ERVK 463 584 0 3 756 26 0 0 0 chr15 22519444 22519470 -80975504 + AT_rich Low_complexity Low_complexity 1 26 0 3 756 360 0 0 0 chr15 22519487 22519527 -80975447 + (TAA)n Simple_repeat Simple_repeat 1 40 0 3 756 318 200 26 17 chr15 22519812 22519929 -80975045 + (CATA)n Simple_repeat Simple_repeat 2 119 0 3 756 420 347 88 0 chr15 22520090 22520283 -80974691 - MLT1E3 LTR MaLR -60 564 355 3 756 307 241 59 24 chr15 22520381 22520466 -80974508 - MTE2b LTR MaLR -15 364 277 3 756 254 183 28 14 chr15 22520487 22520559 -80974415 + A-rich Low_complexity Low_complexity 4 76 0 3 756 225 65 0 0 chr15 22521474 22521505 -80973469 + (CAA)n Simple_repeat Simple_repeat 2 32 0 3 756 207 0 0 0 chr15 22521620 22521643 -80973331 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3 756 347 317 139 35 chr15 22521999 22522172 -80972802 + B4A SINE B4 90 280 -12 4 756 200 121 0 29 chr15 22523370 22523404 -80971570 + (CATATA)n Simple_repeat Simple_repeat 3 35 0 4 756 470 81 0 39 chr15 22523607 22523684 -80971290 + (TA)n Simple_repeat Simple_repeat 2 75 0 4 756 354 23 0 0 chr15 22524292 22524335 -80970639 + (CATAT)n Simple_repeat Simple_repeat 3 45 0 4 756 6050 192 64 25 chr15 22524394 22525704 -80969270 - Lx4B LINE L1 -9 7049 5689 4 756 433 252 0 47 chr15 22525712 22525862 -80969112 + Lx6 LINE L1 7314 7456 -4 4 756 5815 119 35 8 chr15 22526218 22527149 -80967825 + Lx3A LINE L1 6019 6975 -6 4 756 186 43 0 0 chr15 22528000 22528023 -80966951 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 756 291 235 0 0 chr15 22528430 22528549 -80966425 + CT-rich Low_complexity Low_complexity 2 120 0 4 756 758 318 80 3 chr15 22528553 22528903 -80966071 - Lx8 LINE L1 -247 7226 6850 4 756 506 57 14 0 chr15 22529250 22529320 -80965654 + (TTTA)n Simple_repeat Simple_repeat 4 74 0 5 756 233 305 10 78 chr15 22529370 22529473 -80965501 - RMER5 LTR ERV1 -274 260 165 5 756 30 0 0 0 chr15 22529926 22529956 -80965018 + AT_rich Low_complexity Low_complexity 1 30 0 5 756 25 0 0 0 chr15 22530748 22530773 -80964201 + AT_rich Low_complexity Low_complexity 1 25 0 5 756 294 377 0 0 chr15 22531444 22531550 -80963424 + PB1D9 SINE Alu 7 112 -8 5 756 21 0 0 0 chr15 22531634 22531655 -80963319 + AT_rich Low_complexity Low_complexity 1 21 0 5 756 319 79 15 31 chr15 22532160 22532225 -80962749 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 5 756 2032 173 30 18 chr15 22532679 22533078 -80961896 - Lx3B LINE L1 -5 6968 6565 5 756 2400 127 12 1 chr15 22533079 22533478 -80961496 + Lx6 LINE L1 5261 5680 -200 5 756 545 217 28 0 chr15 22533962 22534105 -80960869 - Lx6 LINE L1 -5 7455 7309 5 756 2441 138 23 5 chr15 22534105 22534491 -80960483 + L1_Mm LINE L1 5482 5874 -9 5 756 2520 84 6 19 chr15 22534508 22534873 -80960101 + L1Md_F2 LINE L1 6220 6579 -3 6 756 1030 271 4 0 chr15 22534873 22535109 -80959865 - Lx6 LINE L1 -145 7315 7079 5 756 1986 214 63 4 chr15 22535111 22535426 -80959548 - RMER6C LTR ERVK 0 690 357 6 756 354 61 0 0 chr15 22535426 22535475 -80959499 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 756 1986 214 63 4 chr15 22535475 22535619 -80959355 - RMER6C LTR ERVK -334 356 205 6 756 6216 152 17 13 chr15 22535633 22536718 -80958256 - Lx2B LINE L1 -1 6999 5911 6 756 820 276 22 18 chr15 22536722 22536951 -80958023 - Lx6 LINE L1 -732 6728 6499 5 756 1796 265 143 15 chr15 22536955 22537572 -80957402 + Lx6 LINE L1 5800 6495 -965 5 756 456 364 0 0 chr15 22537616 22537759 -80957215 - B3 SINE B2 -1 215 73 6 756 450 0 0 0 chr15 22537790 22537840 -80957134 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 756 560 146 10 0 chr15 22537840 22537943 -80957031 + GA-rich Low_complexity Low_complexity 2 105 0 6 756 512 288 27 61 chr15 22538083 22538346 -80956628 - Lx9 LINE L1 -422 7222 6969 6 756 21 71 0 0 chr15 22538740 22538782 -80956192 + AT_rich Low_complexity Low_complexity 1 42 0 6 756 292 88 17 17 chr15 22539900 22539958 -80955016 + (TTTTA)n Simple_repeat Simple_repeat 2 59 0 6 756 904 141 0 0 chr15 22539976 22540111 -80954863 - B1_Mus1 SINE Alu -8 140 6 7 756 390 257 40 99 chr15 22540111 22540127 -80954847 - B4 SINE B4 -74 218 77 7 756 207 0 0 0 chr15 22540131 22540154 -80954820 + (A)n Simple_repeat Simple_repeat 1 23 0 7 756 22 70 0 0 chr15 22540705 22540748 -80954226 + AT_rich Low_complexity Low_complexity 1 43 0 7 756 712 320 76 47 chr15 22541117 22541461 -80953513 + MTEa LTR MaLR 22 375 -4 7 756 1358 92 16 0 chr15 22541827 22542012 -80952962 + B2_Mm2 SINE B2 1 188 -7 7 756 261 98 0 0 chr15 22542639 22542680 -80952294 + (TTA)n Simple_repeat Simple_repeat 2 42 0 7 94 5888 121 26 9 chr15 22543528 22544462 -80950512 + Lx3A LINE L1 6023 6972 -9 7 757 396 85 0 33 chr15 22544637 22544698 -80950276 + B1_Mus2 SINE Alu 1 59 -88 7 757 276 186 37 64 chr15 22544784 22544893 -80950081 + RLTR25B LTR ERVK 397 502 -526 7 757 778 66 0 9 chr15 22544830 22544937 -80950037 + B1_Mus2 SINE Alu 42 147 0 8 757 2310 205 45 22 chr15 22545154 22545692 -80949282 - Lx3C LINE L1 -2 6974 6425 8 757 27 81 0 0 chr15 22545719 22545781 -80949193 + AT_rich Low_complexity Low_complexity 1 62 0 8 757 1032 60 0 0 chr15 22546042 22546175 -80948799 + B1_Mus1 SINE Alu 7 139 -9 8 757 429 36 0 0 chr15 22546176 22546231 -80948743 + (CAAAA)n Simple_repeat Simple_repeat 5 59 0 8 757 408 280 141 29 chr15 22546510 22546573 -80948401 - Lx6 LINE L1 -138 7322 7257 8 757 2576 52 2 163 chr15 22546573 22547008 -80947966 - RLTR10B2 LTR ERVK 0 365 1 8 757 408 280 141 29 chr15 22547008 22547150 -80947824 - Lx6 LINE L1 -204 7256 7094 8 757 206 159 56 0 chr15 22547629 22547755 -80947219 + (TA)n Simple_repeat Simple_repeat 1 133 0 8 757 32 43 0 0 chr15 22548906 22548952 -80946022 + AT_rich Low_complexity Low_complexity 1 46 0 8 757 324 0 0 0 chr15 22550220 22550256 -80944718 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 757 327 371 6 38 chr15 22550261 22550418 -80944556 - B3A SINE B2 -44 154 3 9 757 26 88 0 0 chr15 22550951 22551019 -80943955 + AT_rich Low_complexity Low_complexity 1 68 0 9 757 1191 15 0 0 chr15 22551050 22551187 -80943787 + (TCTCCC)n Simple_repeat Simple_repeat 5 141 0 9 757 9793 84 1 3 chr15 22551306 22552969 -80942005 - L1_Mus1 LINE L1 -1 6566 4903 9 757 2323 66 119 11 chr15 22552969 22553321 -80941653 - RLTR10 LTR ERVK 0 390 1 9 757 9793 110 2 5 chr15 22553321 22553769 -80941205 - L1_Mus1 LINE L1 -981 4902 4460 9 757 360 127 16 0 chr15 22553764 22553827 -80941147 + L1Md_F LINE L1 732 795 -5724 9 757 200 245 0 20 chr15 22553926 22553976 -80940998 + GA-rich Low_complexity Low_complexity 4 52 0 9 757 2307 60 0 16 chr15 22555387 22555692 -80939282 + L1Md_F2 LINE L1 6269 6568 -14 9 757 872 86 85 8 chr15 22556351 22556480 -80938494 + B1_Mus1 SINE Alu 1 139 -9 9 757 207 0 0 0 chr15 22556480 22556503 -80938471 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 757 4064 85 17 7 chr15 22556622 22557216 -80937758 + MusHAL1 LINE L1 2110 2709 -3 1 757 2808 260 70 71 chr15 22557229 22558266 -80936708 - Lx7 LINE L1 -123 7573 6538 1 757 2489 203 92 31 chr15 22558429 22558950 -80936024 - RMER20B LTR ERVK 0 627 69 1 757 905 133 6 0 chr15 22558950 22559108 -80935866 + (TCCC)n Simple_repeat Simple_repeat 4 162 0 1 757 992 88 14 0 chr15 22559108 22559255 -80935719 + (TTTC)n Simple_repeat Simple_repeat 2 151 0 1 757 2489 203 92 31 chr15 22559255 22559321 -80935653 - RMER20B LTR ERVK -559 68 4 1 757 587 304 13 0 chr15 22559323 22559481 -80935493 + B3 SINE B2 57 216 0 1 757 183 139 0 0 chr15 22559483 22559519 -80935455 + (T)n Simple_repeat Simple_repeat 1 36 0 1 757 32 43 0 0 chr15 22560771 22560817 -80934157 + AT_rich Low_complexity Low_complexity 1 46 0 1 757 187 31 30 30 chr15 22561566 22561599 -80933375 + (TTA)n Simple_repeat Simple_repeat 3 35 0 1 757 569 69 11 0 chr15 22561648 22561735 -80933239 + (TG)n Simple_repeat Simple_repeat 2 89 0 1 757 339 349 116 37 chr15 22561753 22562244 -80932730 - L1M4 LINE L1 -397 5787 5258 1 757 5235 102 25 1 chr15 22562566 22563334 -80931640 - Lx3_Mus LINE L1 0 7009 6224 1 757 2856 78 4 123 chr15 22563335 22563848 -80931126 + L1_Mur1 LINE L1 5223 5674 -212 1 757 574 313 64 21 chr15 22563886 22564323 -80930651 - L1M2 LINE L1 -1156 4987 4532 1 757 218 314 86 19 chr15 22565543 22565705 -80929269 + MIR SINE MIR 90 262 0 1 757 1710 167 46 9 chr15 22565986 22566331 -80928643 - RLTR15 LTR ERVK 0 359 2 1 757 894 239 156 48 chr15 22567295 22567629 -80927345 - Lx5 LINE L1 -5 7045 6676 1 757 1316 249 33 14 chr15 22567628 22567994 -80926980 - Lx5 LINE L1 -789 6261 5889 1 757 560 301 79 35 chr15 22568476 22568679 -80926295 - B3 SINE B2 0 216 5 1 757 23 33 0 0 chr15 22568710 22568740 -80926234 + AT_rich Low_complexity Low_complexity 1 30 0 1 757 345 266 76 35 chr15 22569070 22569214 -80925760 + Lx9 LINE L1 7316 7465 -179 1 757 342 0 0 0 chr15 22569245 22569283 -80925691 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1 757 23 0 0 0 chr15 22569483 22569506 -80925468 + AT_rich Low_complexity Low_complexity 1 23 0 1 757 189 0 0 0 chr15 22569528 22569549 -80925425 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 757 246 215 0 0 chr15 22570949 22571028 -80923946 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 757 207 204 0 0 chr15 22571775 22571819 -80923155 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 757 27 62 0 0 chr15 22572015 22572063 -80922911 + AT_rich Low_complexity Low_complexity 1 48 0 1 757 3858 193 80 22 chr15 22572301 22573256 -80921718 - L1_Mur3 LINE L1 -811 5069 4060 1 757 399 83 0 0 chr15 22573260 22573320 -80921654 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 757 270 0 0 0 chr15 22573320 22573349 -80921625 + (GA)n Simple_repeat Simple_repeat 1 30 0 1 757 33885 80 1 9 chr15 22573514 22578213 -80916761 - L1Md_F2 LINE L1 -8 6574 1915 1 757 2538 94 67 21 chr15 22578213 22578602 -80916372 - RLTR10A LTR ERVK -4 407 1 1 757 33885 74 4 5 chr15 22578602 22580002 -80914972 - L1Md_F2 LINE L1 -3969 1914 511 1 757 26 74 0 0 chr15 22580142 22580196 -80914778 + AT_rich Low_complexity Low_complexity 1 54 0 1 757 257 131 16 0 chr15 22580388 22580449 -80914525 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 757 536 314 35 0 chr15 22583506 22583675 -80911299 - ID_B1 SINE B4 -49 175 1 1 757 417 20 0 0 chr15 22583881 22583931 -80911043 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 757 312 238 12 0 chr15 22583934 22584014 -80910960 + MER31B LTR ERV1 377 457 -9 1 757 381 238 67 0 chr15 22584113 22584218 -80910756 - Tigger15a DNA TcMar -440 275 164 1 757 450 0 0 0 chr15 22585054 22585104 -80909870 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 757 921 313 58 0 chr15 22585105 22585383 -80909591 - Lx6 LINE L1 -134 7326 7033 1 757 782 68 8 0 chr15 22585810 22585927 -80909047 + L1Md_F2 LINE L1 6462 6579 -3 1 757 1446 50 0 0 chr15 22586185 22586367 -80908607 - L1Md_T LINE L1 -1 6581 6400 1 757 22 0 0 0 chr15 22586978 22587000 -80907974 + AT_rich Low_complexity Low_complexity 1 22 0 1 757 2895 165 24 6 chr15 22587125 22587636 -80907338 - Lx4B LINE L1 -40 7018 6499 1 757 7452 73 2 11 chr15 22589346 22590662 -80904312 - L1Md_F2 LINE L1 0 6582 5280 1 757 24142 74 6 3 chr15 22590646 22594687 -80900287 - L1Md_F2 LINE L1 -11 6571 2517 1 757 22 0 0 0 chr15 22595142 22595164 -80899810 + AT_rich Low_complexity Low_complexity 1 22 0 1 757 200 172 17 0 chr15 22595195 22595253 -80899721 + GA-rich Low_complexity Low_complexity 1 59 0 1 757 3406 176 48 12 chr15 22595462 22596130 -80898844 - RLTR17 LTR ERVK 0 692 1 1 757 182 62 0 30 chr15 22596140 22596173 -80898801 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 757 1021 124 3 1 chr15 22596393 22596553 -80898421 - Lx3_Mus LINE L1 -353 6656 6475 1 757 22 0 0 0 chr15 22596668 22596690 -80898284 + AT_rich Low_complexity Low_complexity 1 22 0 1 757 409 223 50 0 chr15 22597154 22597275 -80897699 - Lx9 LINE L1 -1 7643 7517 1 757 275 96 19 0 chr15 22597305 22597357 -80897617 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 757 236 339 50 62 chr15 22597570 22597749 -80897225 + MLT1B LTR MaLR 104 280 -110 1 757 238 213 21 0 chr15 22598997 22599044 -80895930 + (CATA)n Simple_repeat Simple_repeat 4 51 0 1 757 729 311 40 29 chr15 22599224 22599611 -80895363 - Lx9 LINE L1 -1675 5969 5541 1 757 509 170 9 0 chr15 22599775 22599887 -80895087 + (TG)n Simple_repeat Simple_repeat 2 114 0 1 757 444 285 151 0 chr15 22600062 22600241 -80894733 + B3 SINE B2 2 207 -9 1 757 2424 78 6 0 chr15 22601561 22601883 -80893091 - L1Md_F2 LINE L1 -58 5825 5502 1 757 4843 93 15 21 chr15 22601870 22602724 -80892250 + L1Md_F2 LINE L1 5807 6633 -5 1 757 462 36 0 0 chr15 22603942 22603998 -80890976 + (TTC)n Simple_repeat Simple_repeat 2 57 0 1 757 261 296 110 27 chr15 22604006 22604152 -80890822 + RMER15 LTR ERVL 411 568 -7 1 757 420 91 0 0 chr15 22604215 22604281 -80890693 + (TC)n Simple_repeat Simple_repeat 1 66 0 1 757 324 48 0 0 chr15 22604281 22604323 -80890651 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 757 490 328 83 44 chr15 22604326 22604578 -80890396 - B4A SINE B4 -17 275 14 1 757 225 178 78 10 chr15 22605009 22605111 -80889863 + (TA)n Simple_repeat Simple_repeat 2 110 0 1 757 986 319 27 29 chr15 22605277 22605719 -80889255 - Lx9 LINE L1 -475 7169 6729 1 757 9693 25 0 0 chr15 22606624 22608432 -80886542 - L1Md_A LINE L1 0 6582 4775 1 757 304 361 58 22 chr15 22609143 22609418 -80885556 - B4A SINE B4 -4 288 4 1 757 1143 356 34 57 chr15 22609620 22609880 -80885094 - Lx5 LINE L1 -15 7035 6788 1 757 602 26 0 13 chr15 22609880 22609957 -80885017 + (GAAA)n Simple_repeat Simple_repeat 2 77 0 1 757 1143 356 34 57 chr15 22609957 22610293 -80884681 - Lx5 LINE L1 -263 6787 6459 1 757 429 20 0 0 chr15 22610293 22610343 -80884631 + (TTA)n Simple_repeat Simple_repeat 3 52 0 1 757 1143 322 32 31 chr15 22610343 22610632 -80884342 - Lx5 LINE L1 -592 6458 6138 1 757 55 0 0 0 chr15 22610778 22610833 -80884141 + AT_rich Low_complexity Low_complexity 1 55 0 1 757 27 81 0 0 chr15 22610893 22610955 -80884019 + AT_rich Low_complexity Low_complexity 1 62 0 1 757 387 0 0 0 chr15 22611281 22611324 -80883650 + (T)n Simple_repeat Simple_repeat 1 43 0 1 757 389 331 31 41 chr15 22611455 22611745 -80883229 - Lx8 LINE L1 -383 7090 6804 1 757 348 397 20 7 chr15 22611865 22612012 -80882962 - RSINE1 SINE B4 -8 157 9 1 757 22 35 0 0 chr15 22613207 22613236 -80881738 + AT_rich Low_complexity Low_complexity 1 29 0 1 757 623 205 98 42 chr15 22613429 22613643 -80881331 - URR1A DNA MER1_type 0 226 1 1 757 37844 31 0 0 chr15 22613870 22620118 -80874856 - L1Md_T LINE L1 0 6585 242 1 757 34 24 0 0 chr15 22620311 22620352 -80874622 + AT_rich Low_complexity Low_complexity 1 41 0 1 757 182 383 37 12 chr15 22621099 22621181 -80873793 + MIR SINE MIR 56 139 -123 1 757 369 109 0 0 chr15 22621639 22621694 -80873280 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 757 213 114 0 0 chr15 22622504 22622529 -80872445 + (A)n Simple_repeat Simple_repeat 1 25 0 1 757 563 40 0 13 chr15 22622529 22622604 -80872370 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 1 757 213 114 0 0 chr15 22622604 22622613 -80872361 + (A)n Simple_repeat Simple_repeat 1 9 0 1 757 37980 43 0 3 chr15 22622837 22629184 -80865790 - L1Md_T LINE L1 0 6585 160 1 757 4093 65 40 9 chr15 22629405 22629948 -80865026 - LTRIS2 LTR ERV1 0 564 5 1 757 871 243 17 4 chr15 22629951 22630182 -80864792 - RLTR1B-int LTR ERV1 -42 5021 4788 1 757 9388 144 146 48 chr15 22630173 22632928 -80862046 - RLTR1B-int LTR ERV1 -792 4271 760 1 757 4387 150 39 16 chr15 22632919 22633664 -80861310 - RMER16-int LTR ERVK -3962 1444 683 1 757 943 157 61 17 chr15 22633649 22633830 -80861144 - RMER16-int LTR ERVK -5076 330 142 1 757 1019 137 24 61 chr15 22634182 22634448 -80860526 - RLTR1B-int LTR ERV1 -3011 288 60 1 757 257 209 25 76 chr15 22634475 22634594 -80860380 - RLTR1B-int LTR ERV1 -3585 113 1 1 757 4080 67 40 9 chr15 22634594 22635137 -80859837 - LTRIS2 LTR ERV1 0 564 5 1 757 551 26 0 0 chr15 22636602 22636678 -80858296 - L1Md_F2 LINE L1 -14 6568 6493 1 757 24 0 0 0 chr15 22636945 22636969 -80858005 + AT_rich Low_complexity Low_complexity 1 24 0 1 757 896 126 22 17 chr15 22637014 22637192 -80857782 + CT-rich Low_complexity Low_complexity 1 179 0 1 757 433 275 48 159 chr15 22637938 22638124 -80856850 + Lx9 LINE L1 7161 7323 -321 1 757 234 0 0 0 chr15 22638124 22638150 -80856824 + (CAAAC)n Simple_repeat Simple_repeat 5 30 0 1 757 433 275 48 159 chr15 22638150 22638499 -80856475 + Lx9 LINE L1 7324 7637 -7 1 757 4704 81 49 1 chr15 22640618 22641274 -80853700 - L1_Mus3 LINE L1 -1 6637 5951 1 757 556 330 59 21 chr15 22641355 22641643 -80853331 - RMER15 LTR ERVL -6 569 271 1 757 288 0 0 0 chr15 22641722 22641754 -80853220 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 757 6644 124 79 1 chr15 22641765 22642745 -80852229 - Lx3A LINE L1 -3 6978 5912 1 757 194 0 0 37 chr15 22642745 22642772 -80852202 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 757 6644 124 79 1 chr15 22642772 22642900 -80852074 - Lx3A LINE L1 -1070 5911 5784 1 757 342 357 0 0 chr15 22643812 22643980 -80850994 + (CCA)n Simple_repeat Simple_repeat 1 168 0 1 757 1511 122 42 0 chr15 22644646 22644811 -80850163 - Lx3A LINE L1 -89 5797 5632 1 757 4221 67 0 0 chr15 22644811 22645346 -80849628 - L1Md_T LINE L1 -1 6581 6047 1 757 1511 122 42 0 chr15 22645346 22645418 -80849556 - Lx3A LINE L1 -255 5631 5551 1 757 383 125 0 0 chr15 22646114 22646170 -80848804 + 5S rRNA rRNA 36 91 -30 2 757 665 318 15 25 chr15 22646166 22646440 -80848534 - RLTR15 LTR ERVK -56 303 33 2 757 960 88 0 0 chr15 22647079 22647215 -80847759 + (TC)n Simple_repeat Simple_repeat 1 136 0 2 757 21 0 0 0 chr15 22647796 22647817 -80847157 + AT_rich Low_complexity Low_complexity 1 21 0 2 757 385 115 0 22 chr15 22648331 22648420 -80846554 + (TTTG)n Simple_repeat Simple_repeat 2 88 0 2 757 288 318 23 12 chr15 22648521 22648607 -80846367 + MER5B DNA MER1_type 68 154 -24 2 757 472 68 27 0 chr15 22648751 22648824 -80846150 + (TA)n Simple_repeat Simple_repeat 2 76 0 2 757 1205 312 64 54 chr15 22648945 22649629 -80845345 - MERVL_2A-int LTR ERVL -4447 1314 624 2 757 583 228 79 18 chr15 22649643 22649808 -80845166 - MERVL_2A-int LTR ERVL -5181 580 406 2 757 208 135 0 0 chr15 22649850 22649887 -80845087 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 757 241 141 53 66 chr15 22650149 22650225 -80844749 + T-rich Low_complexity Low_complexity 4 78 0 2 757 213 65 0 0 chr15 22650325 22650356 -80844618 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 2 757 3203 195 43 135 chr15 22650371 22651250 -80843724 + RMER21B LTR ERV1 40 837 -5 2 757 230 224 14 43 chr15 22651781 22651851 -80843123 + CT-rich Low_complexity Low_complexity 4 71 0 2 757 1465 117 0 0 chr15 22652745 22652967 -80842007 + L1_Mur2 LINE L1 4209 4430 -1447 2 757 991 114 108 0 chr15 22652967 22653134 -80841840 + B2_Mm2 SINE B2 11 195 0 2 757 338 198 0 11 chr15 22653150 22653237 -80841737 + Lx3C LINE L1 6887 6972 -4 2 757 31 26 0 0 chr15 22653731 22653769 -80841205 + AT_rich Low_complexity Low_complexity 1 38 0 2 757 6169 181 116 10 chr15 22654094 22655784 -80839190 - L1_Mur1 LINE L1 -3201 2685 819 2 757 417 20 0 0 chr15 22657215 22657265 -80837709 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 757 1475 70 5 0 chr15 22657427 22657627 -80837347 - L1_Mus1 LINE L1 0 6567 6367 2 757 2572 88 20 3 chr15 22657628 22657982 -80836992 + L1_Mm LINE L1 5296 5655 -228 2 757 2337 121 29 0 chr15 22658470 22658817 -80836157 - L1_Mur1 LINE L1 -135 5751 5395 2 757 333 363 31 19 chr15 22659656 22659816 -80835158 + ID_B1 SINE B4 12 173 -51 2 757 327 146 0 0 chr15 22660664 22660719 -80834255 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 757 5299 70 0 21 chr15 22660883 22661586 -80833388 - L1Md_F2 LINE L1 -14 6568 5881 2 757 290 408 77 24 chr15 22661942 22662188 -80832786 - LTR16B2 LTR ERVL -178 284 26 2 757 997 240 80 78 chr15 22663378 22663511 -80831463 - Lx7 LINE L1 0 7696 7562 2 757 306 0 0 0 chr15 22663511 22663545 -80831429 + (TAA)n Simple_repeat Simple_repeat 1 34 0 2 757 997 240 80 78 chr15 22663545 22663739 -80831235 - Lx7 LINE L1 -135 7561 7355 2 757 605 26 26 0 chr15 22663739 22663817 -80831157 + (GAAAA)n Simple_repeat Simple_repeat 2 81 0 2 757 997 240 80 78 chr15 22663817 22663910 -80831064 - Lx7 LINE L1 -342 7354 7268 2 757 1003 104 0 0 chr15 22663910 22664044 -80830930 - B1_Mus2 SINE Alu -13 134 1 2 757 997 240 80 78 chr15 22664044 22664096 -80830878 - Lx7 LINE L1 -429 7267 7221 2 757 4151 63 0 0 chr15 22664450 22664974 -80830000 - L1_Mus1 LINE L1 0 6567 6044 2 757 23 54 0 0 chr15 22664982 22665019 -80829955 + AT_rich Low_complexity Low_complexity 1 37 0 2 757 338 369 18 59 chr15 22665039 22665209 -80829765 - RSINE1 SINE B4 0 165 3 2 757 22 0 0 0 chr15 22665930 22665952 -80829022 + AT_rich Low_complexity Low_complexity 1 22 0 2 757 309 259 53 9 chr15 22666900 22667013 -80827961 - L1M2 LINE L1 -483 5817 5700 2 757 339 221 137 0 chr15 22667087 22667182 -80827792 - Lx9 LINE L1 -586 7058 6951 2 757 1630 249 78 14 chr15 22667217 22667641 -80827333 - Lx9 LINE L1 -753 6891 6441 2 757 1623 317 59 26 chr15 22667729 22668446 -80826528 - Lx8 LINE L1 0 7473 6734 2 757 248 152 15 0 chr15 22668493 22668559 -80826415 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 2 757 22 0 0 0 chr15 22668600 22668622 -80826352 + AT_rich Low_complexity Low_complexity 1 22 0 2 757 2102 180 2 44 chr15 22668731 22669161 -80825813 - RLTR11B LTR ERVK -2 451 40 2 757 380 329 117 14 chr15 22669321 22669534 -80825440 + ORR1E LTR MaLR 118 352 -7 2 757 554 279 113 66 chr15 22669545 22669998 -80824976 + RLTR11A2 LTR ERVK 1 474 -53 2 757 1458 195 78 29 chr15 22670054 22670402 -80824572 - ORR1B2 LTR MaLR 0 367 3 2 757 2597 113 25 5 chr15 22670723 22671123 -80823851 - L1_Mus3 LINE L1 0 6638 6231 2 757 1720 272 94 33 chr15 22672057 22672240 -80822734 - Lx2B LINE L1 -15 6985 6766 2 757 354 45 0 0 chr15 22672240 22672284 -80822690 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 757 2029 242 20 19 chr15 22672284 22672802 -80822172 - Lx2B LINE L1 -235 6765 6241 2 757 4773 122 122 51 chr15 22672848 22674537 -80820437 + L1VL2 LINE L1 281 2089 -1526 2 757 11072 175 32 35 chr15 22674540 22674775 -80820199 + Lx LINE L1 3606 3852 -2031 2 757 192 40 0 0 chr15 22674775 22674800 -80820174 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 2 757 11072 175 32 35 chr15 22674800 22674907 -80820067 + Lx LINE L1 3853 3986 -1897 2 757 450 0 0 0 chr15 22674907 22674957 -80820017 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 94 11072 175 32 35 chr15 22674957 22676439 -80818535 + Lx LINE L1 3987 5416 -467 2 758 3152 58 180 2 chr15 22676439 22676873 -80818101 - RLTR1B LTR ERV1 0 512 2 2 758 11072 122 44 21 chr15 22676873 22677985 -80816989 + Lx LINE L1 5417 6556 -98 2 758 2922 195 48 19 chr15 22678038 22678986 -80815988 - Lx2B LINE L1 -835 6165 5184 2 758 2990 194 10 43 chr15 22678976 22679805 -80815169 + Lx2B LINE L1 4473 5201 -679 2 758 567 29 0 0 chr15 22679938 22680007 -80814967 + (CA)n Simple_repeat Simple_repeat 1 69 0 2 758 237 33 0 0 chr15 22680908 22680938 -80814036 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 758 1001 58 22 0 chr15 22681099 22681238 -80813736 + (TCTCCC)n Simple_repeat Simple_repeat 4 145 0 2 758 2800 9 88 6 chr15 22681247 22681586 -80813388 + IAPLTR1_Mm LTR ERVK 1 367 0 2 758 7767 80 89 50 chr15 22681586 22682843 -80812131 + IAPEz-int LTR ERVK 8 1313 -5168 2 758 28788 20 2 2 chr15 22682841 22686115 -80808859 + IAPEz-int LTR ERVK 3209 6481 0 2 758 2788 12 88 6 chr15 22686115 22686454 -80808520 + IAPLTR1_Mm LTR ERVK 1 367 0 2 758 620 324 14 10 chr15 22686472 22686681 -80808293 - Lx6 LINE L1 -99 7361 7152 2 758 506 295 82 23 chr15 22686676 22686933 -80808041 - Lx6 LINE L1 -1246 6214 5943 2 758 268 77 37 37 chr15 22686922 22686976 -80807998 - Lx LINE L1 -17 6637 6584 2 758 345 241 99 27 chr15 22686980 22687091 -80807883 - Lx5 LINE L1 -509 6541 6423 2 758 26 0 0 0 chr15 22687121 22687147 -80807827 + AT_rich Low_complexity Low_complexity 1 26 0 2 758 180 0 0 0 chr15 22688615 22688635 -80806339 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2 758 3821 82 60 2 chr15 22690635 22691183 -80803791 - RLTR13D1 LTR ERVK 0 806 227 2 758 2957 142 37 26 chr15 22691156 22691693 -80803281 - RLTR13D1 LTR ERVK -359 543 1 2 758 266 194 0 16 chr15 22691998 22692061 -80802913 + (TTA)n Simple_repeat Simple_repeat 2 63 0 2 758 527 258 39 0 chr15 22692074 22692202 -80802772 - B1_Mus1 SINE Alu 0 148 16 2 758 3035 142 49 15 chr15 22692218 22692753 -80802221 - RLTR1D LTR ERV1 -16 589 37 2 758 516 31 0 0 chr15 22693227 22693251 -80801723 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 758 630 99 0 0 chr15 22693251 22693342 -80801632 + (TA)n Simple_repeat Simple_repeat 1 91 0 2 758 516 31 0 0 chr15 22693342 22693381 -80801593 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 758 318 332 130 14 chr15 22693402 22693625 -80801349 + Lx8 LINE L1 7219 7467 -6 2 758 354 156 0 0 chr15 22695527 22695591 -80799383 + (TA)n Simple_repeat Simple_repeat 2 65 0 2 758 21 71 0 0 chr15 22695933 22695975 -80798999 + AT_rich Low_complexity Low_complexity 1 42 0 2 758 23 33 0 0 chr15 22696137 22696167 -80798807 + AT_rich Low_complexity Low_complexity 1 30 0 2 758 2489 146 46 40 chr15 22696361 22696840 -80798134 - RLTR45 LTR ERVK 0 482 1 2 758 817 244 5 15 chr15 22696926 22697130 -80797844 + Lx9 LINE L1 7014 7215 -429 2 758 685 274 14 36 chr15 22697777 22697997 -80796977 - B3 SINE B2 0 216 2 2 758 748 316 102 35 chr15 22698478 22698793 -80796181 - MTE2b LTR MaLR -41 338 3 2 758 1064 303 57 16 chr15 22698944 22699316 -80795658 - L1_Mur3 LINE L1 -7049 663 277 2 758 412 36 0 0 chr15 22699451 22699507 -80795467 - L1Md_F2 LINE L1 -25 6557 6502 2 758 197 106 59 29 chr15 22699517 22699585 -80795389 + (TTTAA)n Simple_repeat Simple_repeat 1 70 0 2 758 1185 126 14 0 chr15 22699585 22699792 -80795182 - Lx3_Mus LINE L1 0 7009 6800 2 758 1163 99 0 0 chr15 22699792 22699944 -80795030 + Lx3_Mus LINE L1 6626 6777 -232 2 758 25 31 0 0 chr15 22700380 22700412 -80794562 + AT_rich Low_complexity Low_complexity 1 32 0 2 758 186 43 0 0 chr15 22700610 22700633 -80794341 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 758 489 233 0 41 chr15 22701944 22702065 -80792909 + B1_Mur2 SINE Alu 10 125 -24 2 758 225 274 0 0 chr15 22702114 22702165 -80792809 + GA-rich Low_complexity Low_complexity 2 52 0 2 758 5370 64 22 14 chr15 22702305 22703031 -80791943 - L1Md_F2 LINE L1 0 6582 5851 2 758 248 45 23 0 chr15 22704986 22705030 -80789944 - Lx2A LINE L1 0 7008 6964 2 758 443 234 0 8 chr15 22705119 22705244 -80789730 + (TA)n Simple_repeat Simple_repeat 2 125 0 2 758 4278 138 99 19 chr15 22705554 22705966 -80789008 - RMER17A2 LTR ERVK -3 903 482 2 758 635 37 12 0 chr15 22705966 22706048 -80788926 + (GA)n Simple_repeat Simple_repeat 2 84 0 2 758 4278 138 99 19 chr15 22706048 22706471 -80788503 - RMER17A2 LTR ERVK -425 481 3 2 758 231 267 11 11 chr15 22706565 22706656 -80788318 + Lx9 LINE L1 7553 7643 -1 2 758 31 0 0 0 chr15 22706757 22706788 -80788186 + AT_rich Low_complexity Low_complexity 1 31 0 2 758 630 39 0 0 chr15 22707279 22707356 -80787618 + (TAAAA)n Simple_repeat Simple_repeat 4 80 0 2 758 3100 104 47 2 chr15 22709097 22709567 -80785407 + L1_Mus3 LINE L1 6145 6635 -3 2 758 184 131 21 21 chr15 22710022 22710069 -80784905 + CT-rich Low_complexity Low_complexity 1 47 0 2 758 1166 85 11 0 chr15 22710070 22710246 -80784728 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 2 758 570 344 50 62 chr15 22710934 22711194 -80783780 + B4 SINE B4 29 285 -7 2 758 499 383 29 29 chr15 22712073 22712315 -80782659 + B4A SINE B4 3 244 -48 2 758 1125 62 0 0 chr15 22712318 22712464 -80782510 + (CA)n Simple_repeat Simple_repeat 2 147 0 2 758 235 65 43 0 chr15 22712917 22712963 -80782011 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 2 758 1220 41 0 0 chr15 22713360 22713507 -80781467 + B1_Mm SINE Alu 1 147 0 2 758 207 100 0 0 chr15 22713507 22713537 -80781437 + (A)n Simple_repeat Simple_repeat 1 30 0 2 758 985 99 77 41 chr15 22713774 22713943 -80781031 + B2_Mm2 SINE B2 2 176 -19 3 758 75 39 0 0 chr15 22714255 22714358 -80780616 + AT_rich Low_complexity Low_complexity 1 103 0 3 758 609 273 0 0 chr15 22714432 22714571 -80780403 - B1_Mur2 SINE Alu -8 141 3 3 758 228 176 0 0 chr15 22715873 22715941 -80779033 + T-rich Low_complexity Low_complexity 1 68 0 3 758 360 0 0 0 chr15 22716120 22716160 -80778814 + (TC)n Simple_repeat Simple_repeat 2 41 0 3 758 279 0 0 0 chr15 22716160 22716190 -80778784 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 758 26 50 0 0 chr15 22716415 22716455 -80778519 + AT_rich Low_complexity Low_complexity 1 40 0 3 758 3935 115 2 40 chr15 22716989 22717631 -80777343 - L1_Mm LINE L1 -579 5304 4688 3 758 306 0 0 0 chr15 22717958 22717992 -80776982 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 758 715 336 77 21 chr15 22718057 22718872 -80776102 + L1MA9 LINE L1 5299 6154 -146 3 758 498 46 0 0 chr15 22719983 22720048 -80774926 + (TG)n Simple_repeat Simple_repeat 1 65 0 3 758 990 231 29 8 chr15 22721856 22722096 -80772878 - RLTR28 LTR ERVL 0 524 280 3 758 5873 176 25 16 chr15 22722096 22723399 -80771575 - Lx4A LINE L1 -278 6780 5455 3 758 11041 103 27 3 chr15 22723398 22725779 -80769195 + L1_Mus1 LINE L1 4122 6567 0 3 758 3112 251 39 24 chr15 22726380 22727216 -80767758 + ORR1D2-int LTR MaLR 509 1364 -6 3 758 1185 270 57 28 chr15 22727222 22727576 -80767398 + ORR1D2 LTR MaLR 1 364 -6 3 758 328 274 0 12 chr15 22727576 22727661 -80767313 - Lx9 LINE L1 -623 7021 6938 3 758 219 232 13 115 chr15 22727669 22727747 -80767227 + B2_Mm2 SINE B2 22 91 -104 3 758 25 75 0 0 chr15 22728010 22728063 -80766911 + AT_rich Low_complexity Low_complexity 1 53 0 3 758 451 301 100 16 chr15 22728084 22728302 -80766672 - Lx9 LINE L1 -753 6891 6633 3 758 1528 232 93 16 chr15 22728302 22728679 -80766295 - MTC LTR MaLR 0 421 16 3 758 1120 316 12 54 chr15 22728695 22729176 -80765798 - Lx9 LINE L1 -943 6701 6241 3 758 771 245 50 81 chr15 22729185 22729443 -80765531 + RMER20B LTR ERVK 364 613 -14 3 758 230 265 0 56 chr15 22730646 22730718 -80764256 + RMER20B LTR ERVK 556 623 -4 3 758 297 0 0 0 chr15 22730724 22730757 -80764217 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 758 2269 99 3 3 chr15 22730787 22731112 -80763862 - L1_Mus2 LINE L1 -1 6565 6241 3 758 3112 53 10 0 chr15 22731114 22731511 -80763463 + L1_Mus2 LINE L1 5677 6077 -489 3 758 291 203 14 0 chr15 22731514 22731583 -80763391 - Lx9 LINE L1 -87 5760 5691 3 758 230 262 0 24 chr15 22731583 22731665 -80763309 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 3 758 1746 277 184 17 chr15 22731822 22732849 -80762125 - Lx9 LINE L1 -1410 6063 4804 3 758 189 132 0 0 chr15 22733304 22733342 -80761632 + (AACTG)n Simple_repeat Simple_repeat 4 41 0 3 758 1010 144 330 8 chr15 22733353 22733611 -80761363 - RMER6C LTR ERVK -349 341 1 3 758 333 0 0 0 chr15 22733636 22733673 -80761301 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 758 23 54 0 0 chr15 22735120 22735157 -80759817 + AT_rich Low_complexity Low_complexity 1 37 0 3 758 39378 31 2 6 chr15 22735476 22741680 -80753294 - L1Md_T LINE L1 0 6582 413 3 758 617 264 0 0 chr15 22742482 22742611 -80752363 - B1_Mus1 SINE Alu -7 141 13 3 758 195 114 0 0 chr15 22743093 22743128 -80751846 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 758 192 296 86 57 chr15 22744448 22744588 -80750386 + L2a LINE L2 3278 3421 -5 3 758 2922 258 42 13 chr15 22744997 22745692 -80749282 - Lx6 LINE L1 -2 7458 6754 3 758 252 0 0 0 chr15 22745692 22745720 -80749254 + (TTTTA)n Simple_repeat Simple_repeat 4 31 0 3 758 2922 258 42 13 chr15 22745720 22745794 -80749180 - Lx6 LINE L1 -707 6753 6667 3 758 535 323 34 15 chr15 22745826 22746093 -80748881 - L1_Mur3 LINE L1 -7203 509 238 3 758 2181 189 178 25 chr15 22746189 22746786 -80748188 - RMER6C LTR ERVK 0 690 3 3 758 200 206 0 0 chr15 22747653 22747687 -80747287 + polypyrimidine Low_complexity Low_complexity 3 36 0 3 758 292 307 11 33 chr15 22747712 22747803 -80747171 - PB1D10 SINE Alu -6 111 23 3 758 35 24 0 0 chr15 22748018 22748060 -80746914 + AT_rich Low_complexity Low_complexity 1 42 0 3 758 336 338 26 57 chr15 22748339 22748484 -80746490 + B1F SINE Alu 11 148 -1 3 758 180 0 0 0 chr15 22749024 22749044 -80745930 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 3 758 21 36 0 0 chr15 22749122 22749150 -80745824 + AT_rich Low_complexity Low_complexity 1 28 0 3 758 205 240 0 0 chr15 22750001 22750051 -80744923 + (TAGA)n Simple_repeat Simple_repeat 2 51 0 3 758 228 430 28 7 chr15 22750786 22750929 -80744045 - RSINE1 SINE B4 -7 158 13 3 758 541 241 28 55 chr15 22751738 22751883 -80743091 - B3A SINE B2 0 198 58 3 758 23 0 0 0 chr15 22752353 22752376 -80742598 + AT_rich Low_complexity Low_complexity 1 23 0 3 758 245 77 0 19 chr15 22752994 22753050 -80741924 - L1_Mus1 LINE L1 0 6567 6519 3 758 402 21 0 0 chr15 22753131 22753178 -80741796 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 758 646 48 119 0 chr15 22753758 22753884 -80741090 + (ATTAG)n Simple_repeat Simple_repeat 5 145 0 3 758 22 0 0 0 chr15 22754492 22754514 -80740460 + AT_rich Low_complexity Low_complexity 1 22 0 3 758 321 26 0 0 chr15 22755613 22755651 -80739323 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 758 418 208 52 0 chr15 22755773 22755869 -80739105 - MTD LTR MaLR -309 110 10 3 758 426 79 0 0 chr15 22756059 22756122 -80738852 + (GA)n Simple_repeat Simple_repeat 2 64 0 3 758 323 219 27 27 chr15 22756621 22756696 -80738278 - BC1_Mm scRNA scRNA -64 88 14 3 758 248 77 26 0 chr15 22757034 22757073 -80737901 + (TC)n Simple_repeat Simple_repeat 2 41 0 3 758 244 310 12 0 chr15 22757815 22757957 -80737017 - L1MD LINE L1 -914 5445 5301 3 758 325 320 121 55 chr15 22757983 22758165 -80736809 + B3A SINE B2 5 198 0 3 758 943 211 126 72 chr15 22758436 22758962 -80736012 - RLTR21 LTR ERVK -4 1400 745 3 758 351 0 0 0 chr15 22759100 22759139 -80735835 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 758 245 135 0 0 chr15 22759177 22759214 -80735760 - L1_Mur2 LINE L1 -360 5517 5481 3 758 2540 266 52 11 chr15 22759250 22759976 -80734998 - L1_Mur3 LINE L1 -6666 1046 291 3 758 207 0 0 0 chr15 22761296 22761319 -80733655 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 3 758 339 25 0 0 chr15 22762210 22762250 -80732724 + (A)n Simple_repeat Simple_repeat 1 40 0 3 758 23 0 0 0 chr15 22762467 22762490 -80732484 + AT_rich Low_complexity Low_complexity 1 23 0 3 758 23 68 0 0 chr15 22762607 22762651 -80732323 + AT_rich Low_complexity Low_complexity 1 44 0 3 758 762 84 0 0 chr15 22763348 22763455 -80731519 + (TTCC)n Simple_repeat Simple_repeat 3 109 0 3 758 1151 242 40 99 chr15 22763457 22763615 -80731359 - Lx2B LINE L1 -22 6978 6845 3 758 279 79 0 0 chr15 22763615 22763653 -80731321 + (CAG)n Simple_repeat Simple_repeat 1 38 0 3 758 1151 242 40 99 chr15 22763653 22763898 -80731076 - Lx2B LINE L1 -156 6844 6599 3 758 450 36 0 0 chr15 22764476 22764532 -80730442 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 758 591 280 157 0 chr15 22764709 22764945 -80730029 - Ricksha DNA MuDR -300 2946 2674 3 758 1421 37 0 4 chr15 22765005 22765249 -80729725 + (GAA)n Simple_repeat Simple_repeat 1 242 0 3 758 792 326 19 43 chr15 22765249 22765573 -80729401 - ORR1E LTR MaLR -41 318 3 3 758 1589 68 0 0 chr15 22765604 22765809 -80729165 - L1_Mus1 LINE L1 -418 6149 5945 3 758 1421 51 0 0 chr15 22765809 22765986 -80728988 + L1_Mus1 LINE L1 6389 6565 -2 3 758 1597 236 109 14 chr15 22766483 22766904 -80728070 + Lx5 LINE L1 6588 7048 -2 3 758 1134 82 0 0 chr15 22768423 22768570 -80726404 + B1_Mus2 SINE Alu 1 147 0 3 758 24 0 0 0 chr15 22768570 22768594 -80726380 + AT_rich Low_complexity Low_complexity 1 24 0 3 758 40 49 0 0 chr15 22769352 22769413 -80725561 + AT_rich Low_complexity Low_complexity 1 61 0 3 758 189 107 0 0 chr15 22769984 22770012 -80724962 + (TTA)n Simple_repeat Simple_repeat 3 30 0 3 758 6762 120 24 26 chr15 22770018 22771153 -80723821 - Lx3A LINE L1 0 6981 5849 3 758 216 0 0 0 chr15 22771345 22771369 -80723605 + (T)n Simple_repeat Simple_repeat 1 24 0 3 758 1025 103 7 0 chr15 22771369 22771515 -80723459 - B1_Mus2 SINE Alu 0 147 1 3 758 387 0 0 0 chr15 22771686 22771729 -80723245 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 758 376 381 76 0 chr15 22771767 22772016 -80722958 - B4A SINE B4 -12 280 13 3 758 946 103 0 52 chr15 22772113 22772124 -80722850 - B1_Mm SINE Alu 0 147 137 3 758 203 0 0 36 chr15 22772124 22772152 -80722822 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 3 758 946 103 0 52 chr15 22772152 22772293 -80722681 - B1_Mm SINE Alu -11 136 3 3 758 328 20 20 0 chr15 22772702 22772752 -80722222 - L1_Mus3 LINE L1 -8 6630 6580 3 758 288 0 0 0 chr15 22772939 22772971 -80722003 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 758 21 57 0 0 chr15 22773684 22773719 -80721255 + AT_rich Low_complexity Low_complexity 1 35 0 3 758 408 312 64 109 chr15 22774749 22774866 -80720108 + Lx8 LINE L1 7172 7306 -167 3 758 561 55 0 0 chr15 22774866 22774939 -80720035 + (TA)n Simple_repeat Simple_repeat 1 73 0 3 758 408 312 64 109 chr15 22774939 22775134 -80719840 + Lx8 LINE L1 7307 7470 -3 3 758 3942 121 30 11 chr15 22775269 22775905 -80719069 + Lx LINE L1 6000 6647 -7 3 758 447 319 102 16 chr15 22777414 22777669 -80717305 + Lx8 LINE L1 7195 7471 -2 3 758 2178 132 2 61 chr15 22778018 22778413 -80716561 + Lx LINE L1 6258 6629 -25 3 758 211 243 11 159 chr15 22778542 22778630 -80716344 + B1_Mur2 SINE Alu 73 147 -2 3 758 207 0 0 0 chr15 22778918 22778941 -80716033 + (A)n Simple_repeat Simple_repeat 1 23 0 3 758 332 259 26 9 chr15 22779367 22779480 -80715494 - Lx9 LINE L1 -33 7611 7497 3 758 597 266 34 0 chr15 22779507 22779684 -80715290 - Lx9 LINE L1 -215 7429 7247 3 758 3432 63 13 7 chr15 22780581 22781030 -80713944 + L1_Mus3 LINE L1 6122 6573 -65 3 758 30430 77 3 9 chr15 22781207 22786273 -80708701 - L1Md_Gf LINE L1 -504 5382 254 4 758 236 250 14 29 chr15 22786422 22786492 -80708482 + GA-rich Low_complexity Low_complexity 3 71 0 4 758 387 0 0 0 chr15 22786506 22786549 -80708425 + (GA)n Simple_repeat Simple_repeat 1 43 0 4 758 543 355 97 16 chr15 22786560 22786932 -80708042 + MTD LTR MaLR 18 419 0 4 758 180 0 0 0 chr15 22787292 22787312 -80707662 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 758 318 310 44 25 chr15 22787317 22787476 -80707498 + MIR SINE MIR 80 241 -21 4 758 225 0 0 0 chr15 22788296 22788321 -80706653 + (TAGA)n Simple_repeat Simple_repeat 2 26 0 4 758 518 301 49 35 chr15 22788367 22788570 -80706404 + B3 SINE B2 1 206 -10 4 758 279 291 11 23 chr15 22789213 22789301 -80705673 - 7SK RNA RNA -226 105 19 4 758 1329 224 123 29 chr15 22790128 22790510 -80704464 + Lx4B LINE L1 6636 7053 -5 4 758 215 364 97 37 chr15 22790857 22790991 -80703983 + MIRb SINE MIR 34 175 -93 4 758 200 250 14 27 chr15 22791025 22791082 -80703892 + (ATG)n Simple_repeat Simple_repeat 1 57 0 4 758 276 53 0 0 chr15 22791082 22791120 -80703854 + (TTG)n Simple_repeat Simple_repeat 1 38 0 4 758 200 250 14 27 chr15 22791120 22791136 -80703838 + (ATG)n Simple_repeat Simple_repeat 3 18 0 4 758 183 42 0 0 chr15 22791404 22791428 -80703546 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 4 758 976 97 8 0 chr15 22791428 22791562 -80703412 - B1_Mus1 SINE Alu -13 135 1 4 758 1267 123 5 5 chr15 22792054 22792242 -80702732 - Lx LINE L1 -189 6465 6278 4 758 464 0 18 0 chr15 22792547 22792603 -80702371 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 4 758 446 348 61 0 chr15 22794090 22794271 -80700703 + B4A SINE B4 97 288 -4 4 758 414 0 0 0 chr15 22794311 22794357 -80700617 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 758 8073 55 1 0 chr15 22795489 22796550 -80698424 - L1_Mus1 LINE L1 0 6567 5506 4 758 187 232 232 0 chr15 22797888 22797970 -80697004 - L4 LINE RTE -201 1828 1728 4 758 1483 31 51 5 chr15 22798478 22798674 -80696300 + L1Md_A LINE L1 6377 6581 -1 4 758 22 56 0 0 chr15 22798890 22798926 -80696048 + AT_rich Low_complexity Low_complexity 1 36 0 4 758 268 173 48 36 chr15 22799308 22799392 -80695582 + CT-rich Low_complexity Low_complexity 5 89 0 4 758 295 29 0 0 chr15 22799867 22799902 -80695072 + U6 snRNA snRNA 2 36 -71 4 758 25 31 0 0 chr15 22800115 22800147 -80694827 + AT_rich Low_complexity Low_complexity 1 32 0 4 758 644 314 5 32 chr15 22801630 22801847 -80693127 + Lx7 LINE L1 7085 7295 -401 4 758 240 143 12 49 chr15 22804208 22804289 -80690685 + (TA)n Simple_repeat Simple_repeat 2 79 0 4 758 508 135 192 0 chr15 22804363 22804467 -80690507 - Lx2 LINE L1 -1 6996 6873 4 758 214 336 15 53 chr15 22804600 22804732 -80690242 + B1F2 SINE Alu 2 128 -21 4 758 448 143 10 10 chr15 22805904 22806003 -80688971 + (TA)n Simple_repeat Simple_repeat 1 99 0 4 758 363 23 0 0 chr15 22806022 22806066 -80688908 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 4 94 3219 137 92 32 chr15 22806336 22806903 -80688071 - MT2B LTR ERVL 0 601 1 4 759 715 354 30 73 chr15 22807035 22807404 -80687570 + MTEa LTR MaLR 19 371 -8 4 759 4287 112 10 86 chr15 22807719 22808532 -80686442 - RMER17A LTR ERVK 0 751 1 4 759 29 0 0 0 chr15 22808822 22808851 -80686123 + AT_rich Low_complexity Low_complexity 1 29 0 4 759 4145 132 39 24 chr15 22808853 22809552 -80685422 - Lx3B LINE L1 -4 6969 6261 4 759 336 279 96 0 chr15 22809722 22809826 -80685148 + Lx5 LINE L1 6284 6397 -653 4 759 2222 213 86 37 chr15 22809826 22810454 -80684520 + RMER6C LTR ERVK 1 659 -31 4 759 651 277 75 18 chr15 22810457 22810712 -80684262 + Lx5 LINE L1 6470 6894 -566 4 759 22 0 0 0 chr15 22810885 22810907 -80684067 + AT_rich Low_complexity Low_complexity 1 22 0 4 759 350 330 165 13 chr15 22812212 22812436 -80682538 + MLT1H2 LTR MaLR 152 409 -80 4 759 182 238 214 0 chr15 22812760 22812844 -80682130 - L4 LINE RTE -1079 950 849 4 759 184 158 35 0 chr15 22813568 22813625 -80681349 + A-rich Low_complexity Low_complexity 4 62 0 4 759 632 200 72 29 chr15 22813991 22814130 -80680844 - B1_Mur4 SINE Alu 0 150 6 4 759 24 0 0 0 chr15 22814454 22814478 -80680496 + AT_rich Low_complexity Low_complexity 1 24 0 4 759 23 0 0 0 chr15 22815141 22815164 -80679810 + AT_rich Low_complexity Low_complexity 1 23 0 4 759 3685 167 3 23 chr15 22815839 22816533 -80678441 + Lx LINE L1 5969 6648 -6 4 759 237 178 0 0 chr15 22816558 22816603 -80678371 + A-rich Low_complexity Low_complexity 1 45 0 4 759 964 133 11 11 chr15 22816725 22816900 -80678074 + GA-rich Low_complexity Low_complexity 2 176 0 4 759 689 178 0 48 chr15 22816853 22817042 -80677932 + A-rich Low_complexity Low_complexity 1 180 0 4 759 847 289 91 30 chr15 22817924 22818282 -80676692 - MTD LTR MaLR -42 377 22 4 759 454 281 66 27 chr15 22818358 22818530 -80676444 - MTE-int LTR MaLR -503 1077 949 4 759 27 0 0 0 chr15 22818578 22818605 -80676369 + AT_rich Low_complexity Low_complexity 1 27 0 4 759 1113 304 30 55 chr15 22818609 22819118 -80675856 - Lx9 LINE L1 -228 7416 6921 4 759 682 241 49 0 chr15 22819162 22819324 -80675650 - Lx9 LINE L1 -1085 6559 6390 4 759 674 237 45 30 chr15 22819362 22819562 -80675412 - MTE-int LTR MaLR -1350 230 28 4 759 314 249 185 24 chr15 22819747 22819926 -80675048 - MTD LTR MaLR -216 203 18 4 759 859 273 23 26 chr15 22820119 22820423 -80674551 + Lx7 LINE L1 5570 5908 -1788 4 759 988 61 76 0 chr15 22820873 22821004 -80673970 + B1_Mus1 SINE Alu 2 142 -6 4 759 27 29 0 0 chr15 22821034 22821068 -80673906 + AT_rich Low_complexity Low_complexity 1 34 0 4 759 458 57 14 0 chr15 22821068 22821138 -80673836 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 759 389 351 40 0 chr15 22821817 22821965 -80673009 + Lx7 LINE L1 6276 6429 -1044 4 759 233 257 25 63 chr15 22822043 22822122 -80672852 + RSINE1 SINE B4 20 95 -70 4 759 3162 165 35 40 chr15 22822137 22822788 -80672186 - Lx LINE L1 -5 6649 6002 4 759 2140 45 0 4 chr15 22822792 22823059 -80671915 - L1Md_F3 LINE L1 -3 6581 6316 4 759 990 63 0 0 chr15 22823060 22823187 -80671787 - Lx LINE L1 -643 6011 5885 4 759 1638 166 3 0 chr15 22823188 22823495 -80671479 + L1_Mur2 LINE L1 3466 3773 -2104 4 759 21 0 0 0 chr15 22823580 22823601 -80671373 + AT_rich Low_complexity Low_complexity 1 21 0 4 759 1034 103 7 7 chr15 22823813 22823959 -80671015 + B1_Mm SINE Alu 2 147 0 4 759 189 0 0 0 chr15 22823988 22824009 -80670965 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 759 246 378 34 0 chr15 22825257 22825376 -80669598 - L2 LINE L2 -969 2450 2328 4 759 1795 216 195 42 chr15 22825387 22825957 -80669017 + RMER6C LTR ERVK 1 657 -33 4 759 291 297 8 23 chr15 22827967 22828098 -80666876 + L1MCa LINE L1 2 130 -6378 4 759 435 38 0 0 chr15 22828451 22828504 -80666470 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 759 23 0 0 0 chr15 22828514 22828537 -80666437 + AT_rich Low_complexity Low_complexity 1 23 0 4 759 189 0 0 0 chr15 22829124 22829145 -80665829 + (A)n Simple_repeat Simple_repeat 1 21 0 4 759 1169 41 14 0 chr15 22829203 22829349 -80665625 + B1_Mus1 SINE Alu 1 148 0 4 759 223 49 24 24 chr15 22829351 22829393 -80665581 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 4 759 411 21 0 0 chr15 22829518 22829566 -80665408 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 759 261 135 0 0 chr15 22829816 22829868 -80665106 + (A)n Simple_repeat Simple_repeat 1 52 0 4 759 275 237 53 0 chr15 22830197 22830273 -80664701 + L1MA6 LINE L1 6122 6201 -99 4 759 350 388 83 0 chr15 22832192 22832432 -80662542 + Tigger7 DNA MER2_type 47 306 -2185 4 759 324 70 0 0 chr15 22832581 22832624 -80662350 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 759 280 244 0 85 chr15 22833107 22833237 -80661737 + (GTGTG)n Simple_repeat Simple_repeat 1 119 0 4 759 455 0 18 0 chr15 22833737 22833792 -80661182 + (GA)n Simple_repeat Simple_repeat 2 57 0 4 759 23 54 0 0 chr15 22833947 22833984 -80660990 + AT_rich Low_complexity Low_complexity 1 37 0 4 759 195 72 0 67 chr15 22834271 22834316 -80660658 + (TTTTA)n Simple_repeat Simple_repeat 5 46 0 4 759 215 31 0 30 chr15 22834410 22834443 -80660531 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 4 759 206 116 0 23 chr15 22835051 22835095 -80659879 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 759 357 376 119 5 chr15 22837884 22838103 -80656871 + B4A SINE B4 45 288 -4 4 759 22 0 0 0 chr15 22838748 22838770 -80656204 + AT_rich Low_complexity Low_complexity 1 22 0 4 759 6791 69 11 6 chr15 22839016 22839907 -80655067 - L1_Mus1 LINE L1 -3 6564 5669 4 759 3941 108 3 0 chr15 22839879 22840446 -80654528 + L1_Mus1 LINE L1 5113 5681 -202 4 759 333 0 0 0 chr15 22840447 22840484 -80654490 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 4 759 921 275 87 60 chr15 22840746 22840973 -80654001 - RLTR12B LTR ERVK 0 568 261 4 759 278 26 0 25 chr15 22840973 22841013 -80653961 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 759 1375 82 0 35 chr15 22841015 22841217 -80653757 - L1_Mus1 LINE L1 -5 6562 6368 4 759 1020 247 39 30 chr15 22841217 22841499 -80653475 - RLTR12B LTR ERVK -246 282 1 4 759 21 89 0 0 chr15 22843163 22843219 -80651755 + AT_rich Low_complexity Low_complexity 1 56 0 4 759 1196 54 0 0 chr15 22844112 22844259 -80650715 + B1_Mm SINE Alu 1 147 0 4 759 822 21 0 0 chr15 22844930 22845026 -80649948 + (TC)n Simple_repeat Simple_repeat 2 97 0 4 759 641 214 2 0 chr15 22845385 22845507 -80649467 + B1_Mus1 SINE Alu 13 135 -13 4 759 240 86 0 0 chr15 22845510 22845545 -80649429 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 759 3873 216 7 30 chr15 22847434 22848240 -80646734 + Lx5 LINE L1 6249 7036 -14 4 759 249 33 0 0 chr15 22848240 22848270 -80646704 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 4 759 2526 291 58 26 chr15 22848506 22849101 -80645873 - Lx5 LINE L1 -2 7048 6438 5 759 405 0 0 0 chr15 22849101 22849146 -80645828 + (TC)n Simple_repeat Simple_repeat 1 45 0 5 759 2526 239 60 35 chr15 22849146 22849841 -80645133 - Lx5 LINE L1 -613 6437 5655 5 759 1174 75 0 0 chr15 22849879 22850026 -80644948 - B1_Mus2 SINE Alu 0 147 1 5 759 180 0 0 0 chr15 22850366 22850386 -80644588 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 759 380 250 63 81 chr15 22850415 22850510 -80644464 + Lx6 LINE L1 7205 7299 -161 5 759 2990 219 48 105 chr15 22850510 22851473 -80643501 - RMER13B LTR ERVK 0 908 1 5 759 380 250 63 81 chr15 22851473 22851599 -80643375 + Lx6 LINE L1 7300 7422 -38 5 759 2385 86 18 0 chr15 22851624 22851950 -80643024 - L1_Mus1 LINE L1 0 6567 6236 5 759 3471 67 7 2 chr15 22851955 22852401 -80642573 + L1_Mus1 LINE L1 5734 6181 -386 5 759 297 317 23 39 chr15 22852789 22852917 -80642057 - B1_Mur1 SINE Alu -20 129 4 5 759 320 113 16 0 chr15 22853213 22853275 -80641699 - Lx2 LINE L1 -1 6996 6934 5 759 1872 148 13 96 chr15 22853277 22853387 -80641587 - Lx3B LINE L1 -331 6642 6555 5 759 316 213 0 0 chr15 22853387 22853462 -80641512 - Lx3B LINE L1 0 6973 6899 5 759 1872 148 13 96 chr15 22853462 22853746 -80641228 - Lx3B LINE L1 -419 6554 6281 5 759 450 0 0 0 chr15 22853747 22853797 -80641177 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 5 759 22 35 0 0 chr15 22854601 22854630 -80640344 + AT_rich Low_complexity Low_complexity 1 29 0 5 759 387 159 22 33 chr15 22856622 22856713 -80638261 - Lx3B LINE L1 -785 6188 6099 5 759 506 327 73 35 chr15 22856994 22857506 -80637468 + Lx8 LINE L1 5617 6190 -1283 5 759 303 28 0 0 chr15 22857506 22857542 -80637432 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 759 415 341 103 52 chr15 22857542 22857640 -80637334 + Lx8 LINE L1 6191 6291 -1182 5 759 201 229 0 0 chr15 22857759 22857794 -80637180 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 759 819 269 10 0 chr15 22857981 22858189 -80636785 - Lx7 LINE L1 -917 6779 6570 5 759 850 242 53 142 chr15 22858186 22858623 -80636351 + L1_Mur3 LINE L1 4651 5052 -831 5 759 470 273 62 31 chr15 22860021 22860214 -80634760 + Lx8 LINE L1 7267 7465 -8 5 759 217 408 27 20 chr15 22860312 22860462 -80634512 - B4A SINE B4 -54 238 88 5 759 1906 91 87 3 chr15 22860633 22860921 -80634053 + L1_Mus1 LINE L1 6211 6522 -45 5 759 3848 50 14 0 chr15 22860922 22861407 -80633567 + L1Md_F3 LINE L1 6093 6584 0 5 759 216 97 0 0 chr15 22862523 22862554 -80632420 + (A)n Simple_repeat Simple_repeat 1 31 0 5 759 185 89 33 67 chr15 22862830 22862890 -80632084 + (TTTG)n Simple_repeat Simple_repeat 2 59 0 5 759 343 314 189 0 chr15 22862997 22863166 -80631808 - Lx9 LINE L1 -324 7320 7120 5 759 248 250 0 0 chr15 22863169 22863221 -80631753 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 5 759 428 309 64 78 chr15 22863361 22863579 -80631395 + B3 SINE B2 2 216 0 5 759 501 304 85 35 chr15 22863721 22863922 -80631052 - B3 SINE B2 0 216 6 5 759 384 268 93 14 chr15 22863957 22864097 -80630877 - Lx8 LINE L1 -153 7320 7170 5 759 243 103 0 0 chr15 22864988 22865027 -80629947 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 5 759 4181 163 56 22 chr15 22865736 22866608 -80628366 + RLTR13D6 LTR ERVK 1 902 0 5 759 21 36 0 0 chr15 22867066 22867094 -80627880 + AT_rich Low_complexity Low_complexity 1 28 0 5 759 5548 78 9 1 chr15 22867167 22867912 -80627062 - L1_Mus1 LINE L1 -218 6349 5599 5 759 1429 137 5 0 chr15 22867912 22868131 -80626843 + L1_Mus1 LINE L1 6348 6567 0 5 759 27 29 0 0 chr15 22868369 22868403 -80626571 + AT_rich Low_complexity Low_complexity 1 34 0 5 759 281 269 0 0 chr15 22868791 22868869 -80626105 + GA-rich Low_complexity Low_complexity 2 79 0 5 759 345 82 0 0 chr15 22868873 22868922 -80626052 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 759 270 306 124 25 chr15 22868976 22869147 -80625827 - B4A SINE B4 -2 290 105 5 759 1516 31 0 25 chr15 22869399 22869597 -80625377 - L1Md_F2 LINE L1 0 6582 6390 5 759 3912 26 0 2 chr15 22869597 22870055 -80624919 + L1Md_F2 LINE L1 5931 6387 -195 5 759 225 0 0 0 chr15 22870159 22870184 -80624790 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 5 759 560 329 43 19 chr15 22870311 22870522 -80624452 + B3 SINE B2 1 216 0 5 759 1194 71 0 0 chr15 22873076 22873336 -80621638 + (CA)n Simple_repeat Simple_repeat 1 260 0 5 759 295 350 65 0 chr15 22873713 22873836 -80621138 + RMER5 LTR ERV1 51 181 -353 5 759 207 0 0 0 chr15 22874343 22874366 -80620608 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 759 639 71 0 0 chr15 22874659 22874744 -80620230 + (TG)n Simple_repeat Simple_repeat 2 86 0 5 759 305 318 0 33 chr15 22875820 22875911 -80619063 - ID_B1 SINE B4 -55 169 82 5 759 261 0 0 0 chr15 22876516 22876545 -80618429 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 759 486 0 0 0 chr15 22876545 22876598 -80618376 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 759 1275 212 64 0 chr15 22876886 22877150 -80617824 - Lx4B LINE L1 -314 6744 6464 5 759 196 224 30 0 chr15 22878669 22878736 -80616238 + (CATA)n Simple_repeat Simple_repeat 3 71 0 5 759 21 36 0 0 chr15 22879604 22879632 -80615342 + AT_rich Low_complexity Low_complexity 1 28 0 5 759 192 152 0 0 chr15 22879659 22879692 -80615282 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 5 759 1608 336 50 23 chr15 22880004 22880436 -80614538 - Lx9 LINE L1 -413 7231 6783 5 759 738 223 97 5 chr15 22880436 22880643 -80614331 + URR1A DNA MER1_type 1 226 0 5 759 1608 336 50 23 chr15 22880643 22881038 -80613936 - Lx9 LINE L1 -862 6782 6382 5 759 38 61 0 0 chr15 22881059 22881125 -80613849 + AT_rich Low_complexity Low_complexity 1 66 0 5 759 333 0 0 0 chr15 22881125 22881162 -80613812 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 759 932 103 0 22 chr15 22881911 22882050 -80612924 + B1_Mus2 SINE Alu 12 147 0 5 759 288 247 30 61 chr15 22882551 22882650 -80612324 + MT2B LTR ERVL 161 256 -345 5 759 620 242 53 8 chr15 22882563 22882696 -80612278 + B1_Mur3 SINE Alu 10 148 -1 5 759 218 180 0 39 chr15 22882697 22882749 -80612225 + A-rich Low_complexity Low_complexity 4 53 0 5 759 1372 47 15 35 chr15 22882914 22882950 -80612024 - B2_Mm1t SINE B2 0 193 161 5 759 387 0 0 0 chr15 22882950 22882993 -80611981 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 5 759 1372 47 15 35 chr15 22882993 22883153 -80611821 - B2_Mm1t SINE B2 -33 160 1 5 759 25 51 0 0 chr15 22883205 22883244 -80611730 + AT_rich Low_complexity Low_complexity 1 39 0 5 759 22 0 0 0 chr15 22883475 22883497 -80611477 + AT_rich Low_complexity Low_complexity 1 22 0 5 759 294 143 0 0 chr15 22883535 22883584 -80611390 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 759 201 74 0 0 chr15 22884995 22885022 -80609952 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 5 759 21 0 0 0 chr15 22885214 22885235 -80609739 + AT_rich Low_complexity Low_complexity 1 21 0 5 759 884 251 63 47 chr15 22885390 22885638 -80609336 - L1_Mur3 LINE L1 -983 4897 4637 5 759 366 23 0 0 chr15 22885638 22885681 -80609293 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 759 884 251 63 47 chr15 22885681 22885812 -80609162 - L1_Mur3 LINE L1 -1244 4636 4512 5 759 2541 180 123 28 chr15 22885814 22886430 -80608544 - RMER6C LTR ERVK -15 675 1 5 759 471 238 82 41 chr15 22886430 22886520 -80608454 - L1_Mur3 LINE L1 -1370 4510 4423 5 759 2261 104 0 63 chr15 22886520 22886584 -80608390 - L1_Mus1 LINE L1 0 6567 6505 5 759 2713 84 36 10 chr15 22886584 22886970 -80608004 + MTA_Mm LTR MaLR 1 396 0 5 759 2261 104 0 63 chr15 22886970 22887200 -80607774 - L1_Mus1 LINE L1 -63 6504 6287 5 759 657 0 0 0 chr15 22887200 22887273 -80607701 + (TTTCC)n Simple_repeat Simple_repeat 4 76 0 5 759 189 0 0 0 chr15 22887274 22887295 -80607679 + (TTTC)n Simple_repeat Simple_repeat 4 24 0 5 759 1074 69 14 0 chr15 22887301 22887445 -80607529 - B1_Mus1 SINE Alu -1 147 2 5 759 2261 104 0 63 chr15 22887445 22887521 -80607453 - L1_Mus1 LINE L1 -281 6286 6211 5 759 909 280 290 8 chr15 22887521 22887938 -80607036 - L1_Mur3 LINE L1 -1458 4422 3883 5 759 925 290 52 5 chr15 22887955 22888361 -80606613 + Lx7 LINE L1 5587 6011 -1685 5 759 506 276 29 6 chr15 22888404 22888575 -80606399 + Lx7 LINE L1 6067 6241 -1455 5 759 1740 322 78 35 chr15 22888587 22889504 -80605470 + Lx7 LINE L1 6295 7251 -445 5 759 392 238 14 71 chr15 22889509 22889649 -80605325 - L1_Mur1 LINE L1 -6825 157 26 5 759 2117 90 39 0 chr15 22889650 22889960 -80605014 + Lx3_Mus LINE L1 6687 7008 -1 5 759 399 41 0 0 chr15 22890225 22890274 -80604700 + (TTTG)n Simple_repeat Simple_repeat 1 49 0 5 759 1539 65 0 0 chr15 22890389 22890590 -80604384 - L1_Mus2 LINE L1 0 6566 6366 5 759 349 303 19 19 chr15 22890612 22890767 -80604207 + GA-rich Low_complexity Low_complexity 4 158 0 5 759 2846 84 10 3 chr15 22891182 22891574 -80603400 - MTB LTR MaLR 0 400 6 5 759 1973 254 48 23 chr15 22891596 22892112 -80602862 - Lx6 LINE L1 -174 7286 6758 5 759 4506 10 0 0 chr15 22892102 22892806 -80602168 - L1Md_T LINE L1 -512 6070 5367 5 759 4673 6 0 0 chr15 22892806 22893356 -80601618 + L1Md_T LINE L1 6065 6582 0 5 759 5293 232 55 53 chr15 22893383 22895283 -80599691 - Lx6 LINE L1 -731 6729 4809 5 759 432 67 0 0 chr15 22895283 22895343 -80599631 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 759 5293 210 41 76 chr15 22895343 22895713 -80599261 - Lx6 LINE L1 -1072 4808 4439 5 759 22 70 0 0 chr15 22897078 22897121 -80597853 + AT_rich Low_complexity Low_complexity 1 43 0 5 759 314 244 77 11 chr15 22897455 22897546 -80597428 + MTD LTR MaLR 1 97 -322 5 759 229 181 31 21 chr15 22897604 22897700 -80597274 + (TA)n Simple_repeat Simple_repeat 1 97 0 5 759 250 218 42 84 chr15 22897700 22897795 -80597179 + Lx8 LINE L1 7382 7472 -1 5 759 3647 116 14 11 chr15 22899836 22900395 -80594579 - Lx3A LINE L1 -3 6978 6418 5 759 21 57 0 0 chr15 22900446 22900481 -80594493 + AT_rich Low_complexity Low_complexity 1 35 0 5 759 606 273 36 46 chr15 22901833 22902029 -80592945 - B3A SINE B2 -3 195 2 5 759 559 202 16 58 chr15 22902420 22902609 -80592365 + Lx9 LINE L1 7463 7643 -1 5 759 1504 144 55 31 chr15 22903685 22903978 -80590996 - ORR1A3 LTR MaLR 0 326 27 5 759 408 146 50 20 chr15 22904072 22904174 -80590800 - ORR1A4 LTR MaLR -253 141 4 5 759 899 201 37 0 chr15 22905207 22905396 -80589578 - URR1A DNA MER1_type 0 226 31 5 759 202 222 0 0 chr15 22905759 22905795 -80589179 + (TATATG)n Simple_repeat Simple_repeat 3 38 0 5 759 1211 72 0 27 chr15 22905795 22905980 -80588994 + (TA)n Simple_repeat Simple_repeat 1 180 0 5 759 26 50 0 0 chr15 22907687 22907727 -80587247 + AT_rich Low_complexity Low_complexity 1 40 0 5 759 441 0 0 0 chr15 22907982 22908031 -80586943 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 759 477 0 0 0 chr15 22908031 22908083 -80586891 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 759 580 349 58 31 chr15 22908089 22908349 -80586625 - B4A SINE B4 -25 267 1 6 759 262 248 98 16 chr15 22908543 22908666 -80586308 + Tigger16a DNA Tigger 749 881 -52 6 759 1652 154 31 3 chr15 22910380 22910667 -80584307 - Lx LINE L1 -6 6648 6354 6 759 1777 153 10 7 chr15 22911525 22911834 -80583140 + Lx2A LINE L1 6690 6999 -9 6 759 414 0 0 0 chr15 22912419 22912465 -80582509 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 759 1347 302 70 19 chr15 22912801 22913270 -80581704 - Lx6 LINE L1 -11 7449 6957 6 759 1822 203 72 154 chr15 22913268 22914007 -80580967 + L1_Mur3 LINE L1 4413 5090 -790 6 759 459 152 0 0 chr15 22914150 22914229 -80580745 + (TA)n Simple_repeat Simple_repeat 1 79 0 6 759 22 0 0 0 chr15 22915390 22915412 -80579562 + AT_rich Low_complexity Low_complexity 1 22 0 6 759 751 311 60 3 chr15 22915658 22916063 -80578911 + L1MA4A LINE L1 5511 5945 -358 6 759 1713 249 38 5 chr15 22916139 22916531 -80578443 - MTC LTR MaLR -4 417 13 6 759 1837 213 121 39 chr15 22916731 22917075 -80577899 - RMER6C LTR ERVK 0 690 334 6 759 459 0 0 0 chr15 22917075 22917126 -80577848 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 759 1837 213 121 39 chr15 22917126 22917416 -80577558 - RMER6C LTR ERVK -357 333 4 6 759 25 0 0 0 chr15 22917465 22917490 -80577484 + AT_rich Low_complexity Low_complexity 1 25 0 6 759 369 325 81 63 chr15 22917595 22917818 -80577156 + B4 SINE B4 7 233 -59 6 759 1207 80 0 0 chr15 22917918 22918081 -80576893 - Lx3_Mus LINE L1 -126 6883 6721 6 759 262 242 366 15 chr15 22918358 22918492 -80576482 + URR1B DNA MER1_type 2 182 -43 6 759 459 95 0 0 chr15 22918873 22918947 -80576027 + (CTA)n Simple_repeat Simple_repeat 1 74 0 6 759 223 244 0 0 chr15 22918976 22919017 -80575957 - ID4_ SINE ID -33 50 10 6 759 739 226 57 24 chr15 22919880 22920089 -80574885 - RMER4B LTR ERVK -344 241 26 6 759 198 259 23 12 chr15 22920146 22920318 -80574656 + (TA)n Simple_repeat Simple_repeat 2 175 0 6 759 203 105 53 0 chr15 22920279 22920317 -80574657 + (CATATA)n Simple_repeat Simple_repeat 3 42 0 6 759 536 204 18 0 chr15 22920488 22920601 -80574373 - L1_Rod LINE L1 -59 5788 5674 6 759 648 318 86 33 chr15 22920590 22921069 -80573905 - L1MA6 LINE L1 -142 6158 5655 6 759 253 330 125 39 chr15 22921069 22921277 -80573697 + MLT1E3 LTR MaLR 396 621 -3 6 759 21 82 0 0 chr15 22922313 22922362 -80572612 + AT_rich Low_complexity Low_complexity 1 49 0 6 759 381 22 0 0 chr15 22924907 22924953 -80570021 + (TC)n Simple_repeat Simple_repeat 2 47 0 6 759 1942 49 16 0 chr15 22925206 22925452 -80569522 - L1_Mus1 LINE L1 0 6567 6318 6 759 741 261 82 37 chr15 22925818 22926061 -80568913 - MTD LTR MaLR 0 419 166 6 759 21 0 0 0 chr15 22926912 22926933 -80568041 + AT_rich Low_complexity Low_complexity 1 21 0 6 759 198 128 0 0 chr15 22927822 22927861 -80567113 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 6 759 870 199 20 50 chr15 22929028 22929229 -80565745 - URR1B DNA MER1_type 0 225 31 6 759 455 225 25 0 chr15 22929231 22929351 -80565623 + Lx2A1 LINE L1 6884 7006 -2 6 759 1085 102 0 0 chr15 22929536 22929683 -80565291 + B1_Mus1 SINE Alu 2 148 0 6 759 480 122 0 0 chr15 22929683 22929765 -80565209 + (A)n Simple_repeat Simple_repeat 1 82 0 6 759 443 138 0 11 chr15 22929925 22930013 -80564961 + (TAGA)n Simple_repeat Simple_repeat 4 90 0 6 759 2032 217 67 50 chr15 22930042 22930668 -80564306 + BGLII_B LTR ERVK 1 546 -7 6 759 189 0 0 0 chr15 22930676 22930697 -80564277 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 759 477 0 0 0 chr15 22930697 22930750 -80564224 + (GA)n Simple_repeat Simple_repeat 1 53 0 6 759 909 44 0 0 chr15 22930750 22930864 -80564110 + (GAA)n Simple_repeat Simple_repeat 3 116 0 6 759 798 251 25 20 chr15 22931115 22931314 -80563660 - ORR1D1 LTR MaLR 0 374 175 6 759 634 284 50 5 chr15 22931895 22932097 -80562877 - B3 SINE B2 -5 211 1 6 759 261 287 23 62 chr15 22932774 22932904 -80562070 + RSINE1 SINE B4 4 128 -37 6 759 420 111 0 0 chr15 22932936 22933008 -80561966 + (CA)n Simple_repeat Simple_repeat 1 72 0 6 759 535 253 189 45 chr15 22933511 22933745 -80561229 - MTD LTR MaLR -24 395 154 6 759 1694 101 0 0 chr15 22933769 22933996 -80560978 - L1_Mus1 LINE L1 -190 5693 5467 6 759 6895 66 1 3 chr15 22933994 22934935 -80560039 + L1_Mus1 LINE L1 5684 6567 0 6 759 25 95 0 0 chr15 22936385 22936459 -80558515 + AT_rich Low_complexity Low_complexity 1 74 0 6 759 287 385 21 0 chr15 22937043 22937186 -80557788 + RMER1B Other Other 8 153 -913 6 760 37 0 0 0 chr15 22938001 22938038 -80556936 + AT_rich Low_complexity Low_complexity 1 37 0 6 760 1334 82 11 5 chr15 22939729 22939914 -80555060 + B2_Mm1a SINE B2 1 186 -7 6 760 198 50 49 24 chr15 22940240 22940281 -80554693 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 6 760 2266 228 12 22 chr15 22940369 22940866 -80554108 - Lx2B LINE L1 -3 6997 6506 6 760 717 189 8 0 chr15 22941495 22941622 -80553352 + Lx5 LINE L1 6370 6497 -553 6 760 2627 219 58 7 chr15 22941626 22942164 -80552810 - Lx5 LINE L1 -129 6921 6357 6 760 278 59 0 0 chr15 22942192 22942226 -80552748 - Lx5 LINE L1 -681 6369 6336 6 760 257 220 0 0 chr15 22942431 22942481 -80552493 + Lx5 LINE L1 6383 6432 -618 6 760 1250 253 44 28 chr15 22942605 22942967 -80552007 - ORR1D2 LTR MaLR -2 368 1 6 760 21 0 0 0 chr15 22944972 22944993 -80549981 + AT_rich Low_complexity Low_complexity 1 21 0 6 760 182 33 67 0 chr15 22945022 22945052 -80549922 + (TTTTTA)n Simple_repeat Simple_repeat 4 35 0 6 760 2962 73 5 0 chr15 22945057 22945442 -80549532 - L1_Mus1 LINE L1 0 6567 6181 6 760 280 64 0 41 chr15 22945491 22945540 -80549434 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 760 183 204 0 0 chr15 22947045 22947089 -80547885 + CT-rich Low_complexity Low_complexity 3 46 0 6 760 278 307 9 0 chr15 22947565 22947679 -80547295 - Lx9 LINE L1 -162 7482 7368 6 760 708 347 19 25 chr15 22948588 22948954 -80546020 - Lx8 LINE L1 -270 7203 6840 6 760 1098 320 94 23 chr15 22948986 22949626 -80545348 - Lx8 LINE L1 -711 6762 6078 6 760 539 105 48 0 chr15 22950148 22950329 -80544645 + L1_Mus3 LINE L1 6517 6638 0 6 760 3765 160 125 16 chr15 22950330 22951130 -80543844 + RMER17B LTR ERVK 68 954 -4 6 760 558 305 117 14 chr15 22951146 22951359 -80543615 + MTD LTR MaLR 171 405 -14 6 760 643 199 0 25 chr15 22951359 22951519 -80543455 + GA-rich Low_complexity Low_complexity 4 159 0 6 760 508 325 58 33 chr15 22951535 22951805 -80543169 + L1_Mur3 LINE L1 4859 5141 -739 6 760 543 16 0 0 chr15 22951805 22951869 -80543105 + (CA)n Simple_repeat Simple_repeat 1 64 0 6 760 508 325 58 33 chr15 22951869 22952028 -80542946 + L1_Mur3 LINE L1 5142 5299 -581 6 760 307 278 128 9 chr15 22952107 22952216 -80542758 - MTE2a LTR MaLR -57 322 201 6 760 363 207 21 0 chr15 22952219 22952364 -80542610 + GA-rich Low_complexity Low_complexity 2 149 0 6 760 199 173 19 19 chr15 22952420 22952473 -80542501 + G-rich Low_complexity Low_complexity 4 56 0 6 760 275 139 0 0 chr15 22952583 22952626 -80542348 - ORR1B1 LTR MaLR -69 325 283 6 760 455 209 11 0 chr15 22952635 22952726 -80542248 - ORR1B1-int LTR MaLR -204 1166 1075 6 760 2581 213 87 32 chr15 22952752 22953499 -80541475 + ORR1B1-int LTR MaLR 422 1209 -300 6 760 462 18 0 0 chr15 22953639 22953694 -80541280 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 760 375 248 25 113 chr15 22953699 22953858 -80541116 - Lx9 LINE L1 -274 7370 7226 6 760 5692 119 67 51 chr15 22953980 22954203 -80540771 - L1_Mus3 LINE L1 -30 6608 6335 6 760 1048 99 0 0 chr15 22954203 22954345 -80540629 - B1_Mus1 SINE Alu -6 142 1 6 760 6973 135 93 58 chr15 22954345 22956487 -80538487 - L1_Mus3 LINE L1 -304 6334 4104 6 760 615 278 89 20 chr15 22956522 22956768 -80538206 + L1_Mur3 LINE L1 5468 5730 -150 6 760 473 206 88 61 chr15 22956753 22956934 -80538040 + Lx9 LINE L1 7328 7513 -131 6 760 387 89 0 0 chr15 22957010 22957066 -80537908 + (TA)n Simple_repeat Simple_repeat 2 57 0 6 760 471 237 0 21 chr15 22957066 22957208 -80537766 + Lx9 LINE L1 7498 7636 -8 6 760 226 191 0 93 chr15 22957208 22957283 -80537691 + L1_Mur3 LINE L1 5777 5844 -36 6 760 333 47 0 0 chr15 22957812 22957855 -80537119 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 760 1012 244 18 40 chr15 22959021 22959298 -80535676 + Lx5 LINE L1 6780 7050 0 6 760 27 0 0 0 chr15 22959372 22959399 -80535575 + AT_rich Low_complexity Low_complexity 1 27 0 6 760 180 275 62 12 chr15 22959920 22960001 -80534973 - L3b LINE CR1 -259 223 139 6 760 24 0 0 0 chr15 22960400 22960424 -80534550 + AT_rich Low_complexity Low_complexity 1 24 0 6 760 22 35 0 0 chr15 22961113 22961142 -80533832 + AT_rich Low_complexity Low_complexity 1 29 0 6 760 225 93 36 18 chr15 22961174 22961229 -80533745 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 6 760 533 211 122 18 chr15 22961718 22961882 -80533092 - Lx LINE L1 -257 7216 7036 6 760 2359 189 62 15 chr15 22962890 22963358 -80531616 - Lx LINE L1 -6 6648 6159 6 760 516 213 11 0 chr15 22963351 22963445 -80531529 + Lx LINE L1 6065 6159 -495 6 760 625 181 119 16 chr15 22964062 22964193 -80530781 + Lx9 LINE L1 7431 7564 -80 6 760 522 0 0 0 chr15 22964193 22964251 -80530723 + (TA)n Simple_repeat Simple_repeat 2 59 0 6 760 625 181 119 16 chr15 22964251 22964304 -80530670 + Lx9 LINE L1 7565 7633 -11 6 760 381 58 0 0 chr15 22964844 22964896 -80530078 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 760 180 0 0 0 chr15 22965941 22965961 -80529013 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 760 22 35 0 0 chr15 22968618 22968647 -80526327 + AT_rich Low_complexity Low_complexity 1 29 0 6 760 278 339 48 40 chr15 22968739 22968865 -80526109 - MER20 DNA MER1_type -1 218 92 6 760 2756 61 17 0 chr15 22970589 22970951 -80524023 - L1Md_F2 LINE L1 -12 6570 6203 6 760 3283 256 67 18 chr15 22971015 22972039 -80522935 - Lx9 LINE L1 -141 7503 6429 6 760 290 354 34 17 chr15 22973093 22973211 -80521763 + PB1D7 SINE Alu 1 120 0 6 760 34 42 0 0 chr15 22973326 22973374 -80521600 + AT_rich Low_complexity Low_complexity 1 48 0 6 760 387 0 0 0 chr15 22974231 22974274 -80520700 + (GA)n Simple_repeat Simple_repeat 1 43 0 6 760 377 314 10 10 chr15 22974371 22974474 -80520500 + PB1D10 SINE Alu 14 116 -1 7 760 315 380 64 41 chr15 22974714 22975180 -80519794 - L2 LINE L2 -524 2895 2419 7 760 361 210 25 0 chr15 22975426 22975507 -80519467 - RMER1C Other Other -33 1309 1227 7 760 423 119 0 0 chr15 22975531 22975598 -80519376 + (GGA)n Simple_repeat Simple_repeat 3 69 0 7 760 270 188 35 12 chr15 22975591 22975677 -80519297 + GA-rich Low_complexity Low_complexity 4 91 0 7 760 2300 276 46 34 chr15 22975677 22976438 -80518536 - RMER1C Other Other -117 1225 456 7 760 405 0 0 0 chr15 22977010 22977055 -80517919 + (TC)n Simple_repeat Simple_repeat 1 45 0 7 760 216 0 0 0 chr15 22977055 22977078 -80517896 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 760 563 173 0 7 chr15 22977078 22977218 -80517756 + GA-rich Low_complexity Low_complexity 1 139 0 7 760 271 338 23 98 chr15 22977261 22977435 -80517539 + B4A SINE B4 130 290 -2 7 760 443 239 85 8 chr15 22977600 22977718 -80517256 + MLT1A1 LTR MaLR 268 394 -14 7 760 2682 70 14 0 chr15 22977719 22978076 -80516898 + L1Md_F2 LINE L1 6209 6570 -12 7 760 22 0 0 0 chr15 22978176 22978198 -80516776 + AT_rich Low_complexity Low_complexity 1 22 0 7 760 389 234 0 0 chr15 22978232 22978309 -80516665 - B1_Mur4 SINE Alu -66 84 8 7 760 257 343 37 37 chr15 22978325 22978434 -80516540 - PB1D10 SINE Alu -8 109 1 7 760 400 298 60 24 chr15 22979066 22979201 -80515773 - B4A SINE B4 0 292 168 7 760 21 71 0 0 chr15 22980743 22980785 -80514189 + AT_rich Low_complexity Low_complexity 1 42 0 7 760 318 189 0 0 chr15 22982751 22982825 -80512149 + Lx9 LINE L1 7538 7611 -33 7 760 21 0 0 0 chr15 22982846 22982867 -80512107 + AT_rich Low_complexity Low_complexity 1 21 0 7 760 295 204 0 0 chr15 22982875 22982929 -80512045 + Lx3B LINE L1 6920 6973 0 7 760 273 57 0 0 chr15 22982932 22982967 -80512007 + (TAA)n Simple_repeat Simple_repeat 2 36 0 7 760 1579 340 85 11 chr15 22983075 22984027 -80510947 - Lx8 LINE L1 -248 7225 6203 7 760 33 25 0 0 chr15 22984919 22984959 -80510015 + AT_rich Low_complexity Low_complexity 1 40 0 7 760 603 269 29 40 chr15 22985611 22985786 -80509188 + B3A SINE B2 11 189 -27 7 760 323 23 23 0 chr15 22985786 22985830 -80509144 + (TAAAA)n Simple_repeat Simple_repeat 5 49 0 7 760 460 286 46 31 chr15 22985830 22985849 -80509125 + B3 SINE B2 190 208 -8 7 760 1131 51 0 0 chr15 22985925 22986063 -80508911 + B1_Mm SINE Alu 2 139 -8 7 760 911 96 7 0 chr15 22986063 22986199 -80508775 + (GA)n Simple_repeat Simple_repeat 2 138 0 7 760 581 101 0 10 chr15 22987312 22987412 -80507562 + (TG)n Simple_repeat Simple_repeat 2 100 0 7 760 585 375 13 4 chr15 22987445 22987670 -80507304 - B4A SINE B4 -58 234 8 7 760 180 111 0 0 chr15 22988262 22988289 -80506685 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 760 369 379 58 47 chr15 22988338 22988681 -80506293 - Lx8 LINE L1 -503 6970 6624 7 760 308 360 48 24 chr15 22988924 22989214 -80505760 - Lx7 LINE L1 -1790 5906 5610 7 760 22 0 0 0 chr15 22989519 22989541 -80505433 + AT_rich Low_complexity Low_complexity 1 22 0 7 760 240 176 167 51 chr15 22990252 22990330 -80504644 + Lx5 LINE L1 5287 5373 -504 7 760 5703 189 19 1 chr15 22990321 22991467 -80503507 - Lx2B LINE L1 -286 6714 5545 7 760 559 282 40 36 chr15 22991490 22991693 -80503281 + Lx2B LINE L1 6757 6959 -41 7 760 1347 125 13 18 chr15 22991693 22991963 -80503011 - L1Md_F2 LINE L1 0 6582 6356 7 760 559 282 40 36 chr15 22991963 22991983 -80502991 + Lx2B LINE L1 6960 6981 -19 7 760 6169 203 35 11 chr15 22991969 22992791 -80502183 + Lx5 LINE L1 5343 6190 -860 7 760 573 15 0 0 chr15 22992791 22992857 -80502117 + (GGA)n Simple_repeat Simple_repeat 1 66 0 7 760 6169 213 35 16 chr15 22992857 22993560 -80501414 + Lx5 LINE L1 6191 6912 -138 7 760 32 0 0 0 chr15 22994088 22994120 -80500854 + AT_rich Low_complexity Low_complexity 1 32 0 7 760 2914 206 107 27 chr15 22994191 22994320 -80500654 - Lx3C LINE L1 -46 6930 6761 7 760 238 87 0 42 chr15 22994320 22994368 -80500606 + (TA)n Simple_repeat Simple_repeat 2 47 0 7 760 2914 206 107 27 chr15 22994368 22994986 -80499988 - Lx3C LINE L1 -216 6760 6124 7 760 21 0 0 0 chr15 22995275 22995296 -80499678 + AT_rich Low_complexity Low_complexity 1 21 0 7 760 427 244 71 43 chr15 22996527 22996668 -80498306 - MTD LTR MaLR 0 419 275 7 760 466 299 23 23 chr15 22996641 22996812 -80498162 - MTD LTR MaLR -248 171 1 7 760 243 61 0 0 chr15 22996896 22996929 -80498045 + (TTG)n Simple_repeat Simple_repeat 1 33 0 7 760 490 238 13 83 chr15 22996939 22997095 -80497879 - B1_Mm SINE Alu -2 145 1 7 760 249 109 0 0 chr15 22998231 22998277 -80496697 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 7 760 519 95 0 0 chr15 22998976 22999050 -80495924 + (A)n Simple_repeat Simple_repeat 1 74 0 7 760 2727 53 0 3 chr15 22999659 23000000 -80494974 - L1_Mus1 LINE L1 -1 6566 6227 7 760 1448 34 73 0 chr15 23000012 23000190 -80494784 - B2_Mm1a SINE B2 -1 192 2 1 760 505 33 0 0 chr15 23000190 23000250 -80494724 - L1_Mus2 LINE L1 -342 6224 6165 2 760 308 173 24 12 chr15 23000703 23000785 -80494189 - Lx9 LINE L1 -144 7500 7418 3 760 231 177 31 31 chr15 23001209 23001273 -80493701 + T-rich Low_complexity Low_complexity 3 66 0 4 760 24 0 0 0 chr15 23001599 23001623 -80493351 + AT_rich Low_complexity Low_complexity 1 24 0 5 760 2018 84 1 11 chr15 23001768 23002077 -80492897 - L1_Mus1 LINE L1 -348 6234 5920 6 760 3207 57 2 0 chr15 23002078 23002483 -80492491 + L1_Mus1 LINE L1 6162 6567 0 6 760 2546 109 39 10 chr15 23003150 23003539 -80491435 + MTB LTR MaLR 1 400 0 7 760 25 75 0 0 chr15 23004406 23004459 -80490515 + AT_rich Low_complexity Low_complexity 1 53 0 8 760 216 365 90 38 chr15 23004894 23005105 -80489869 + MIRc SINE MIR 9 230 -38 9 760 1986 117 61 26 chr15 23006427 23006771 -80488203 + Lx LINE L1 6292 6647 -7 1 760 557 365 58 3 chr15 23006866 23007157 -80487817 - MLT1A0 LTR MaLR -6 359 53 1 760 311 267 8 139 chr15 23007207 23007329 -80487645 - RSINE1 SINE B4 -4 161 56 1 760 255 238 0 81 chr15 23007771 23007858 -80487116 + B3A SINE B2 103 182 -16 1 760 357 176 0 0 chr15 23007858 23007932 -80487042 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 760 287 85 0 21 chr15 23009153 23009201 -80485773 + (TTTG)n Simple_repeat Simple_repeat 1 47 0 1 760 389 284 7 26 chr15 23009568 23009663 -80485311 + polypurine Low_complexity Low_complexity 2 94 0 1 760 411 83 0 0 chr15 23009663 23009723 -80485251 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 760 389 284 7 26 chr15 23009723 23009779 -80485195 + polypurine Low_complexity Low_complexity 95 150 0 1 760 6974 53 11 6 chr15 23010356 23011241 -80483733 - L1Md_F2 LINE L1 -12 6570 5681 1 760 312 65 0 0 chr15 23011238 23011284 -80483690 + MusHAL1 LINE L1 361 406 -2306 2 760 405 92 40 30 chr15 23012790 23012891 -80482083 + A-rich Low_complexity Low_complexity 2 103 0 2 760 198 0 0 0 chr15 23012938 23012960 -80482014 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2 760 274 343 45 45 chr15 23013149 23013259 -80481715 - B4 SINE B4 -182 110 1 2 760 549 64 0 0 chr15 23013279 23013357 -80481617 + (TG)n Simple_repeat Simple_repeat 1 78 0 2 760 290 261 501 66 chr15 23013431 23013624 -80481350 - B4A SINE B4 -14 278 2 2 760 1109 83 0 0 chr15 23014676 23014820 -80480154 + B1_Mus2 SINE Alu 2 145 -2 2 760 438 20 0 0 chr15 23014823 23014874 -80480100 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 2 760 3416 142 4 3 chr15 23014983 23015657 -80479317 - Lx2 LINE L1 -1061 5936 5262 2 760 4699 140 41 7 chr15 23015661 23016468 -80478506 + Lx2 LINE L1 6163 6996 -1 2 760 228 86 0 0 chr15 23017037 23017072 -80477902 + (A)n Simple_repeat Simple_repeat 1 35 0 3 760 578 333 67 30 chr15 23017893 23018193 -80476781 + ORR1E LTR MaLR 43 353 -6 3 760 610 289 111 0 chr15 23018228 23018418 -80476556 - B3 SINE B2 -5 211 1 3 760 278 324 36 9 chr15 23018634 23018746 -80476228 - PB1D10 SINE Alu 0 117 3 3 760 399 233 0 94 chr15 23018913 23018929 -80476045 + MT2B LTR ERVL 149 164 -437 3 760 6649 78 22 0 chr15 23018929 23019803 -80475171 - RLTR13B1 LTR ERVK 0 893 1 3 760 399 233 0 94 chr15 23019803 23019914 -80475060 + MT2B LTR ERVL 165 263 -338 3 760 929 73 6 0 chr15 23019914 23019942 -80475032 + B1_Mus2 SINE Alu 2 146 -3 3 760 400 346 57 86 chr15 23020564 23020766 -80474208 - Lx8 LINE L1 -414 7059 6858 3 760 3961 52 6 4 chr15 23020766 23021267 -80473707 + L1Md_F2 LINE L1 6081 6582 0 3 760 400 346 57 86 chr15 23021267 23021324 -80473650 - Lx8 LINE L1 -616 6857 6793 3 760 466 72 36 0 chr15 23021324 23021407 -80473567 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 3 760 400 346 57 86 chr15 23021407 23021621 -80473353 - Lx8 LINE L1 -681 6792 6600 3 760 225 182 0 0 chr15 23021966 23022021 -80472953 + (CATATA)n Simple_repeat Simple_repeat 3 57 0 4 760 259 412 117 13 chr15 23022762 23022993 -80471981 - MLT1G LTR MaLR -135 456 202 4 760 324 311 86 78 chr15 23023015 23023270 -80471704 - RMER2 LTR ERV1 -11 556 300 4 760 591 53 0 0 chr15 23023861 23023936 -80471038 + (TCTA)n Simple_repeat Simple_repeat 3 77 0 4 760 2619 117 10 0 chr15 23025263 23025666 -80469308 - L1_Mus4 LINE L1 -4 6632 6226 4 760 1250 288 19 0 chr15 23026075 23026398 -80468576 + Lx7 LINE L1 6451 6779 -917 4 760 998 292 92 9 chr15 23026403 23026738 -80468236 + Lx7 LINE L1 6890 7252 -444 4 760 887 226 67 40 chr15 23026764 23027063 -80467911 - Lx7 LINE L1 -2 7694 7388 4 760 180 0 0 0 chr15 23027063 23027083 -80467891 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 760 252 0 0 0 chr15 23027083 23027110 -80467864 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 760 200 260 33 27 chr15 23028171 23028321 -80466653 + (TATAA)n Simple_repeat Simple_repeat 3 153 0 4 760 1510 193 27 48 chr15 23029121 23029496 -80465478 - ORR1B2 LTR MaLR 0 367 1 5 760 990 264 90 24 chr15 23029612 23030035 -80464939 + Lx9 LINE L1 7192 7642 -2 5 760 437 290 67 18 chr15 23030255 23030420 -80464554 - MTE2b LTR MaLR -37 342 170 5 760 221 229 0 0 chr15 23030423 23030484 -80464490 + (TCTG)n Simple_repeat Simple_repeat 4 64 0 5 760 417 99 0 36 chr15 23030490 23030574 -80464400 + (TCCC)n Simple_repeat Simple_repeat 1 81 0 5 760 274 262 88 0 chr15 23031507 23031587 -80463387 - BC1_Mm scRNA scRNA -58 94 8 5 760 226 179 60 0 chr15 23032039 23032106 -80462868 + (TA)n Simple_repeat Simple_repeat 1 71 0 5 760 383 223 9 0 chr15 23032914 23033026 -80461948 + (TG)n Simple_repeat Simple_repeat 1 113 0 5 760 369 0 0 0 chr15 23035101 23035142 -80459832 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 760 230 0 0 32 chr15 23035392 23035423 -80459551 + (CACCC)n Simple_repeat Simple_repeat 2 31 0 5 760 180 0 0 0 chr15 23035451 23035471 -80459503 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 760 619 212 20 20 chr15 23037092 23037241 -80457733 + B1_Mur3 SINE Alu 1 149 0 6 760 222 140 33 66 chr15 23037244 23037305 -80457669 + A-rich Low_complexity Low_complexity 2 60 0 6 760 207 171 13 26 chr15 23037555 23037633 -80457341 + T-rich Low_complexity Low_complexity 2 78 0 6 760 519 231 7 58 chr15 23038571 23038709 -80456265 + B1_Mm SINE Alu 17 147 0 6 760 23 33 0 0 chr15 23039368 23039398 -80455576 + AT_rich Low_complexity Low_complexity 1 30 0 6 760 198 136 0 0 chr15 23040565 23040609 -80454365 + (T)n Simple_repeat Simple_repeat 1 44 0 6 760 2395 113 8 3 chr15 23041118 23041474 -80453500 + Lx3A LINE L1 6622 6979 -2 6 760 211 114 0 43 chr15 23041505 23041551 -80453423 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 6 760 645 14 0 0 chr15 23043358 23043432 -80451542 + (TC)n Simple_repeat Simple_repeat 2 75 0 6 760 279 0 0 0 chr15 23043433 23043464 -80451510 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 760 287 310 139 14 chr15 23043473 23043617 -80451357 - B4 SINE B4 -92 200 39 7 760 249 255 64 64 chr15 23044333 23044465 -80450509 + Lx9 LINE L1 7343 7475 -169 7 760 1161 118 0 0 chr15 23044465 23044643 -80450331 + (TA)n Simple_repeat Simple_repeat 1 178 0 7 760 249 255 64 64 chr15 23044643 23044682 -80450292 + Lx9 LINE L1 7476 7514 -130 7 760 300 111 0 0 chr15 23044682 23044727 -80450247 + (CATA)n Simple_repeat Simple_repeat 4 48 0 7 760 255 253 70 55 chr15 23044728 23044820 -80450154 + Lx9 LINE L1 7419 7507 -137 7 760 1161 118 0 0 chr15 23044820 23044998 -80449976 + (TA)n Simple_repeat Simple_repeat 2 179 0 7 760 255 253 70 55 chr15 23044998 23045106 -80449868 + Lx9 LINE L1 7508 7622 -22 7 760 225 109 18 35 chr15 23045114 23045171 -80449803 + (TA)n Simple_repeat Simple_repeat 1 56 0 7 760 4287 47 7 2 chr15 23045248 23045786 -80449188 - L1Md_F3 LINE L1 0 6584 6044 7 760 4026 33 2 40 chr15 23045787 23046456 -80448518 + L1Md_F3 LINE L1 5366 6018 -566 7 760 3047 107 9 13 chr15 23046456 23046921 -80448053 + Lx3_Mus LINE L1 6547 7009 0 7 760 5953 39 0 0 chr15 23047244 23047955 -80447019 - L1Md_T LINE L1 0 6582 5872 8 760 281 316 54 71 chr15 23048261 23048458 -80446516 - L1MB1 LINE L1 -61 6107 5915 8 760 240 35 0 0 chr15 23048458 23048487 -80446487 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 760 281 316 54 71 chr15 23048487 23048643 -80446331 - L1MB1 LINE L1 -254 5914 5760 8 760 180 0 0 0 chr15 23048708 23048728 -80446246 + (T)n Simple_repeat Simple_repeat 1 20 0 8 760 495 0 0 0 chr15 23048758 23048813 -80446161 + (TTTC)n Simple_repeat Simple_repeat 4 58 0 8 760 461 252 48 10 chr15 23048889 23048993 -80445981 - RSINE1 SINE B4 -10 155 48 8 760 386 260 76 28 chr15 23049397 23049646 -80445328 - L1MB1 LINE L1 -808 5332 5072 8 760 21 71 0 0 chr15 23050758 23050800 -80444174 + AT_rich Low_complexity Low_complexity 1 42 0 8 760 898 295 22 37 chr15 23051279 23051634 -80443340 - L1MD2 LINE L1 -403 5956 5607 8 760 2380 87 0 15 chr15 23052805 23053142 -80441832 - L1_Mus4 LINE L1 -7 6629 6298 8 760 207 0 0 0 chr15 23053646 23053669 -80441305 + (TA)n Simple_repeat Simple_repeat 1 23 0 8 760 563 307 130 41 chr15 23053689 23054103 -80440871 + Lx8 LINE L1 6800 7250 -223 9 760 417 264 54 9 chr15 23054748 23054859 -80440115 - B3A SINE B2 -45 153 38 9 760 5040 34 55 2 chr15 23055949 23056571 -80438403 - L1Md_F2 LINE L1 -14 6568 5914 9 760 294 316 189 22 chr15 23056780 23057055 -80437919 - Charlie1b DNA MER1_type -202 321 1 9 760 1281 80 0 0 chr15 23057129 23057304 -80437670 + (TTTC)n Simple_repeat Simple_repeat 1 175 0 9 760 201 281 0 30 chr15 23057377 23057402 -80437572 + T-rich Low_complexity Low_complexity 43 65 0 9 760 4061 101 41 25 chr15 23057402 23058043 -80436931 - Lx LINE L1 -6 6648 5998 9 760 201 281 0 30 chr15 23058043 23058083 -80436891 + T-rich Low_complexity Low_complexity 3 42 0 9 760 202 216 0 0 chr15 23058045 23058082 -80436892 + CT-rich Low_complexity Low_complexity 2 38 0 9 760 677 115 246 0 chr15 23058180 23058302 -80436672 - Lx LINE L1 -643 6011 5860 9 760 396 0 0 0 chr15 23058764 23058808 -80436166 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 9 760 5251 163 37 1 chr15 23059426 23060345 -80434629 - Lx LINE L1 -84 5799 4848 9 760 4850 143 21 2 chr15 23060345 23061143 -80433831 + Lx LINE L1 5834 6646 -8 9 760 205 215 30 15 chr15 23061233 23061299 -80433675 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 760 396 355 21 7 chr15 23061312 23061454 -80433520 + RSINE1 SINE B4 9 152 -13 1 760 200 213 0 0 chr15 23061470 23061517 -80433457 + A-rich Low_complexity Low_complexity 1 47 0 1 760 645 299 40 5 chr15 23061549 23061751 -80433223 - B3 SINE B2 -5 211 3 1 760 719 290 120 59 chr15 23061752 23062093 -80432881 + ORR1D2 LTR MaLR 1 362 -8 1 760 364 82 16 16 chr15 23062096 23062158 -80432816 + (GAAA)n Simple_repeat Simple_repeat 2 63 0 1 760 267 93 0 0 chr15 23063756 23063799 -80431175 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 760 21 36 0 0 chr15 23065580 23065608 -80429366 + AT_rich Low_complexity Low_complexity 1 28 0 1 760 224 59 58 19 chr15 23065723 23065775 -80429199 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 760 1396 229 82 6 chr15 23066725 23067067 -80427907 - ORR1C1 LTR MaLR -10 368 1 1 760 2545 111 26 66 chr15 23067176 23067630 -80427344 + Lx LINE L1 6217 6652 -2 1 760 546 43 0 0 chr15 23067770 23067839 -80427135 + (GA)n Simple_repeat Simple_repeat 2 70 0 1 761 5174 48 0 3 chr15 23069832 23070476 -80424498 - L1Md_F3 LINE L1 0 6584 5943 1 761 812 217 6 11 chr15 23071173 23071350 -80423624 - URR1A DNA MER1_type 0 226 51 1 761 256 24 49 0 chr15 23071580 23071621 -80423353 + (TTG)n Simple_repeat Simple_repeat 2 44 0 1 761 2292 246 71 0 chr15 23071797 23072446 -80422528 - Lx9 LINE L1 -9 7635 6941 1 761 414 0 0 0 chr15 23072713 23072759 -80422215 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1 761 442 274 89 0 chr15 23072809 23072913 -80422061 - B3 SINE B2 -81 135 31 1 761 1161 71 0 6 chr15 23072913 23073082 -80421892 - L1Md_F2 LINE L1 -1 6581 6414 1 761 442 274 89 0 chr15 23073082 23073101 -80421873 - B3 SINE B2 -186 30 2 1 761 1812 131 114 17 chr15 23074615 23074855 -80420119 + Lx LINE L1 6271 6535 -119 1 761 282 73 0 0 chr15 23074855 23074896 -80420078 + (TGGG)n Simple_repeat Simple_repeat 1 41 0 1 761 1812 131 114 17 chr15 23074896 23074962 -80420012 + Lx LINE L1 6536 6601 -53 1 761 197 65 32 0 chr15 23074962 23074993 -80419981 + (CATTA)n Simple_repeat Simple_repeat 5 36 0 1 761 1812 131 114 17 chr15 23074993 23075035 -80419939 + Lx LINE L1 6602 6653 -1 1 761 22574 143 21 42 chr15 23075192 23076749 -80418225 + L1_Mus2 LINE L1 546 2070 -3813 1 761 315 0 0 0 chr15 23076749 23076784 -80418190 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1 761 22574 126 27 5 chr15 23076784 23077110 -80417864 + L1_Mus2 LINE L1 2071 2416 -3467 1 761 474 33 0 0 chr15 23077110 23077170 -80417804 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 761 22574 126 27 5 chr15 23077170 23079729 -80415245 + L1_Mus2 LINE L1 2417 5028 -855 1 761 7073 77 9 52 chr15 23079724 23080789 -80414185 + L1_Mus2 LINE L1 5541 6564 -2 1 761 35 0 0 0 chr15 23080789 23080824 -80414150 + AT_rich Low_complexity Low_complexity 1 35 0 1 761 200 183 66 16 chr15 23081781 23081842 -80413132 + (TAAG)n Simple_repeat Simple_repeat 3 66 0 1 761 21 0 0 0 chr15 23082811 23082832 -80412142 + AT_rich Low_complexity Low_complexity 1 21 0 1 761 396 300 132 0 chr15 23082916 23083106 -80411868 - B3 SINE B2 0 216 2 1 761 194 33 0 62 chr15 23083834 23083866 -80411108 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 761 504 0 0 0 chr15 23084874 23084930 -80410044 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 761 509 285 46 46 chr15 23085023 23085196 -80409778 + RMER1B Other Other 47 219 -847 1 761 227 248 116 27 chr15 23085234 23085346 -80409628 + RMER1B Other Other 329 450 -616 1 761 719 295 40 91 chr15 23085418 23086271 -80408703 + RMER1A Other Other 12 630 -436 1 761 625 187 16 0 chr15 23086304 23086427 -80408547 - URR1A DNA MER1_type -31 195 71 1 761 22 94 0 0 chr15 23086725 23086789 -80408185 + AT_rich Low_complexity Low_complexity 1 64 0 1 761 987 343 37 52 chr15 23086878 23087475 -80407499 - Lx9 LINE L1 -453 7191 6604 1 761 477 277 0 32 chr15 23087593 23087716 -80407258 + B1_Mur1 SINE Alu 15 133 -16 1 761 2039 240 64 20 chr15 23088562 23089324 -80405650 - Lx9 LINE L1 -1 7643 6807 1 761 799 336 41 10 chr15 23089423 23089715 -80405259 - ORR1D2 LTR MaLR 0 370 70 1 761 33 0 0 0 chr15 23089828 23089861 -80405113 + AT_rich Low_complexity Low_complexity 1 33 0 1 761 8261 38 4 1 chr15 23089861 23090921 -80404053 - L1Md_F2 LINE L1 -1 6581 5519 1 761 938 218 34 118 chr15 23090941 23091259 -80403715 - Lx5 LINE L1 -9 7041 6763 1 761 23 33 0 0 chr15 23092491 23092521 -80402453 + AT_rich Low_complexity Low_complexity 1 30 0 1 761 21 0 0 0 chr15 23092579 23092600 -80402374 + AT_rich Low_complexity Low_complexity 1 21 0 1 761 439 316 51 46 chr15 23092672 23092868 -80402106 + B3A SINE B2 2 198 0 1 761 286 264 27 0 chr15 23093292 23093402 -80401572 - Lx6 LINE L1 -12 7448 7336 1 761 338 339 0 16 chr15 23093403 23093529 -80401445 + Lx6 LINE L1 7208 7331 -129 1 761 677 371 54 0 chr15 23094132 23094485 -80400489 + MTE2b LTR MaLR 1 372 -7 1 761 347 356 39 8 chr15 23094611 23094741 -80400233 - B1F1 SINE Alu -9 140 7 1 761 2453 321 123 28 chr15 23096077 23096188 -80398786 - Lx8 LINE L1 -4 7469 7336 1 761 315 0 0 0 chr15 23096188 23096223 -80398751 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1 761 2453 321 123 28 chr15 23096223 23096669 -80398305 - Lx8 LINE L1 -138 7335 6881 1 761 231 36 0 0 chr15 23096669 23096697 -80398277 + (GGGTG)n Simple_repeat Simple_repeat 4 31 0 1 761 2453 322 113 24 chr15 23096697 23098041 -80396933 - Lx8 LINE L1 -593 6880 5396 1 761 1497 90 133 16 chr15 23098044 23098292 -80396682 + L1Md_F2 LINE L1 6294 6570 -12 1 761 28 29 0 0 chr15 23098453 23098488 -80396486 + AT_rich Low_complexity Low_complexity 1 35 0 1 761 280 289 12 0 chr15 23098549 23098632 -80396342 + 4.5SRNA scRNA scRNA 8 91 -3 1 761 635 156 91 14 chr15 23100228 23100371 -80394603 - Lx2 LINE L1 -5 6992 6839 1 761 24 0 0 0 chr15 23100411 23100435 -80394539 + AT_rich Low_complexity Low_complexity 1 24 0 1 761 5992 78 5 0 chr15 23100551 23101345 -80393629 - L1_Mus1 LINE L1 0 6567 5770 1 761 2650 96 0 0 chr15 23101359 23101712 -80393262 + L1_Mm LINE L1 5493 5845 -38 1 761 234 0 0 0 chr15 23101767 23101793 -80393181 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 761 785 224 103 0 chr15 23102410 23102642 -80392332 - Lx9 LINE L1 -508 7136 6881 1 761 310 330 26 0 chr15 23102828 23102943 -80392031 - MTEa LTR MaLR -2 377 260 1 761 359 390 34 0 chr15 23102966 23103112 -80391862 - MTEa LTR MaLR -200 179 29 1 761 2460 90 113 16 chr15 23104962 23105333 -80389641 - MTB_Mm LTR MaLR 0 407 1 1 761 184 308 25 13 chr15 23105466 23105545 -80389429 - L2 LINE L2 -2634 785 706 1 761 22 0 0 0 chr15 23105978 23106000 -80388974 + AT_rich Low_complexity Low_complexity 1 22 0 1 761 7550 64 4 2 chr15 23106264 23107664 -80387310 - L1Md_F2 LINE L1 -19 6563 5162 1 761 23688 75 6 2 chr15 23107662 23111612 -80383362 - L1Md_F2 LINE L1 -2 6580 2615 1 761 540 276 10 15 chr15 23111681 23111880 -80383094 - Lx7 LINE L1 -2 7694 7497 1 761 274 302 35 41 chr15 23112309 23112454 -80382520 - Lx8 LINE L1 -329 7144 7001 1 761 2692 261 128 52 chr15 23112527 23113700 -80381274 - Lx4B LINE L1 0 7058 5797 1 761 267 319 51 8 chr15 23113740 23113857 -80381117 - Lx8 LINE L1 -950 6523 6402 1 761 2994 132 5 0 chr15 23113853 23114294 -80380680 - Lx LINE L1 -449 6205 5763 1 761 829 159 24 6 chr15 23114294 23114459 -80380515 + Lx LINE L1 6484 6651 -3 1 761 705 327 5 0 chr15 23114492 23114706 -80380268 - Lx8 LINE L1 -1068 6405 6191 1 761 203 0 0 36 chr15 23114773 23114801 -80380173 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 761 225 62 0 0 chr15 23114802 23114834 -80380140 - B1_Mm SINE Alu -12 135 104 1 761 702 214 7 20 chr15 23115016 23115164 -80379810 - B1_Mur3 SINE Alu -1 148 3 1 761 285 159 0 0 chr15 23116761 23116824 -80378150 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 761 290 336 52 7 chr15 23117008 23117143 -80377831 - MLT1B LTR MaLR -216 174 34 1 761 2236 222 63 18 chr15 23117312 23117871 -80377103 - Lx2B LINE L1 0 7000 6417 1 761 305 321 27 36 chr15 23118790 23118900 -80376074 + ID_B1 SINE B4 107 215 -9 1 761 1664 236 114 37 chr15 23118901 23119472 -80375502 + RLTR18 LTR ERVK 1 615 -1 1 761 226 336 74 9 chr15 23119571 23119679 -80375295 - ID_B1 SINE B4 -2 222 108 1 761 1080 203 19 5 chr15 23120089 23120302 -80374672 + RMER1C Other Other 843 1058 -284 1 761 411 21 0 0 chr15 23120620 23120668 -80374306 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 761 186 43 0 0 chr15 23120770 23120793 -80374181 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 761 21 57 0 0 chr15 23121053 23121088 -80373886 + AT_rich Low_complexity Low_complexity 1 35 0 1 761 1427 199 56 123 chr15 23121400 23121961 -80373013 - RMER6C LTR ERVK 0 720 298 1 761 1040 95 0 7 chr15 23121961 23122109 -80372865 - B1_Mm SINE Alu 0 147 1 1 761 1427 238 100 97 chr15 23122109 23122412 -80372562 - RMER6C LTR ERVK -393 297 1 1 761 24 53 0 0 chr15 23122479 23122517 -80372457 + AT_rich Low_complexity Low_complexity 1 38 0 1 761 206 103 0 49 chr15 23122863 23122904 -80372070 + T-rich Low_complexity Low_complexity 4 42 0 1 761 204 40 0 0 chr15 23123126 23123151 -80371823 + (T)n Simple_repeat Simple_repeat 1 25 0 1 761 2800 98 18 0 chr15 23123178 23123578 -80371396 - L1_Mus4 LINE L1 -7 6629 6223 1 761 26 0 0 0 chr15 23123875 23123901 -80371073 + AT_rich Low_complexity Low_complexity 1 26 0 1 761 222 172 33 33 chr15 23124075 23124135 -80370839 + T-rich Low_complexity Low_complexity 4 63 0 1 761 1056 266 16 41 chr15 23124144 23124462 -80370512 - Lx6 LINE L1 -725 6735 6426 1 761 1202 253 3 10 chr15 23124471 23124759 -80370215 - Lx9 LINE L1 -857 6787 6502 1 761 826 321 53 45 chr15 23125239 23125598 -80369376 + MTE2a LTR MaLR 17 378 -1 1 761 180 182 0 0 chr15 23125702 23125746 -80369228 + (TCTA)n Simple_repeat Simple_repeat 3 46 0 1 761 278 152 0 17 chr15 23125747 23125807 -80369167 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 761 417 86 0 0 chr15 23125883 23125941 -80369033 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 761 768 208 130 107 chr15 23126027 23126297 -80368677 + ORR1B1 LTR MaLR 1 276 -118 1 761 833 319 57 18 chr15 23126310 23126591 -80368383 + MTE-int LTR MaLR 87 378 -1202 1 761 353 379 156 29 chr15 23126619 23127029 -80367945 + MTE-int LTR MaLR 539 1000 -580 1 761 263 104 21 0 chr15 23127320 23127368 -80367606 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 761 311 399 119 11 chr15 23127372 23127734 -80367240 - MLT2B2 LTR ERVL -74 441 41 2 761 291 54 0 0 chr15 23127787 23127824 -80367150 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 761 477 50 0 0 chr15 23128457 23128517 -80366457 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 761 742 104 7 15 chr15 23129952 23130089 -80364885 + (TCTA)n Simple_repeat Simple_repeat 1 136 0 2 761 24 0 0 0 chr15 23130184 23130208 -80364766 + AT_rich Low_complexity Low_complexity 1 24 0 2 761 21 0 0 0 chr15 23130557 23130578 -80364396 + AT_rich Low_complexity Low_complexity 1 21 0 2 761 1197 97 0 4 chr15 23130676 23130902 -80364072 + (CA)n Simple_repeat Simple_repeat 1 225 0 2 761 233 276 19 67 chr15 23130990 23131095 -80363879 - MLT1A1 LTR MaLR -4 404 305 2 761 365 381 20 13 chr15 23132060 23132209 -80362765 + B4A SINE B4 133 282 -10 2 761 7479 107 7 2 chr15 23132937 23134042 -80360932 + L1_Mm LINE L1 4358 5468 -415 2 761 21 57 0 0 chr15 23134047 23134082 -80360892 + AT_rich Low_complexity Low_complexity 1 35 0 2 761 448 309 77 14 chr15 23134096 23134414 -80360560 + MTD LTR MaLR 51 403 -16 2 761 277 309 49 56 chr15 23134479 23134743 -80360231 + L1P5 LINE L1 5295 5555 -742 2 761 228 274 15 66 chr15 23134977 23135114 -80359860 + L1P5 LINE L1 5803 5932 -368 2 761 6965 105 19 16 chr15 23135393 23136563 -80358411 - L1_Mus1 LINE L1 0 6567 5052 2 761 1804 105 4 4 chr15 23136563 23136830 -80358144 - L1_Mus1 LINE L1 -966 4917 4651 2 761 315 0 0 0 chr15 23136830 23136865 -80358109 + (T)n Simple_repeat Simple_repeat 1 35 0 2 761 4289 102 14 5 chr15 23136868 23137490 -80357484 + L1_Mus1 LINE L1 5939 6566 -1 2 761 372 348 55 42 chr15 23137529 23138152 -80356822 - L1M2 LINE L1 -917 5226 4596 2 761 521 55 14 0 chr15 23138875 23138948 -80356026 + (TC)n Simple_repeat Simple_repeat 2 75 0 2 761 966 145 54 0 chr15 23139007 23139173 -80355801 - Lx3C LINE L1 -52 6924 6750 2 761 2122 100 3 19 chr15 23139180 23139495 -80355479 + L1Md_F2 LINE L1 6273 6582 0 2 761 2379 274 29 12 chr15 23140699 23141280 -80353694 - Lx5 LINE L1 -12 7038 6448 2 761 2365 149 9 42 chr15 23141280 23141707 -80353267 + Lx3B LINE L1 6547 6959 -14 2 761 475 277 87 44 chr15 23141952 23142318 -80352656 - L1M4 LINE L1 -501 5677 5296 2 761 269 285 112 42 chr15 23142516 23142916 -80352058 - L1M4 LINE L1 -3143 3003 2576 2 761 212 122 0 24 chr15 23143328 23143370 -80351604 + (CATATA)n Simple_repeat Simple_repeat 6 46 0 2 761 549 273 172 26 chr15 23143943 23144068 -80350906 - Lx9 LINE L1 -1 7643 7480 2 761 471 35 0 0 chr15 23144068 23144125 -80350849 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 761 566 239 347 25 chr15 23144125 23144482 -80350492 - Lx9 LINE L1 -165 7479 7029 2 761 339 25 0 0 chr15 23144483 23144523 -80350451 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2 761 2285 173 26 0 chr15 23144687 23145108 -80349866 + L1_Mur2 LINE L1 5168 5599 -278 2 761 1526 274 46 74 chr15 23145109 23145719 -80349255 - Lx9 LINE L1 -597 7047 6455 2 761 270 132 0 0 chr15 23145743 23145796 -80349178 + (T)n Simple_repeat Simple_repeat 1 53 0 2 761 225 108 0 0 chr15 23146681 23146718 -80348256 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 761 513 58 0 0 chr15 23146718 23146786 -80348188 + (GA)n Simple_repeat Simple_repeat 2 70 0 2 761 22 0 0 0 chr15 23146851 23146873 -80348101 + AT_rich Low_complexity Low_complexity 1 22 0 2 761 1343 326 22 7 chr15 23146886 23147330 -80347644 - Lx5 LINE L1 -18 7032 6582 2 761 4468 56 19 12 chr15 23148066 23148649 -80346325 - L1Md_F2 LINE L1 0 6582 5996 2 761 920 155 17 11 chr15 23148659 23148835 -80346139 - L1Md_A LINE L1 -5878 846 670 2 761 333 0 0 0 chr15 23148913 23148950 -80346024 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 761 213 39 0 0 chr15 23150115 23150141 -80344833 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 761 919 297 87 34 chr15 23151112 23151559 -80343415 - RLTR40 LTR ERVK -38 779 307 2 761 3014 50 37 0 chr15 23151559 23151941 -80343033 + MTA_Mm LTR MaLR 1 396 0 2 761 919 297 87 34 chr15 23151941 23151964 -80343010 - RLTR40 LTR ERVK -511 306 284 2 761 480 152 0 0 chr15 23151964 23152063 -80342911 + (CA)n Simple_repeat Simple_repeat 2 100 0 2 761 598 287 62 23 chr15 23152103 23152360 -80342614 - RLTR40 LTR ERVK -525 292 26 2 761 21 0 0 0 chr15 23152919 23152940 -80342034 + AT_rich Low_complexity Low_complexity 1 21 0 2 761 21 71 0 0 chr15 23153133 23153175 -80341799 + AT_rich Low_complexity Low_complexity 1 42 0 2 761 420 187 24 8 chr15 23153637 23153761 -80341213 - Lx3_Mus LINE L1 -8 7001 6876 2 761 22 0 0 0 chr15 23154391 23154413 -80340561 + AT_rich Low_complexity Low_complexity 1 22 0 2 761 2241 128 109 5 chr15 23154554 23154939 -80340035 - Lx3_Mus LINE L1 -11 6998 6574 2 761 2067 95 10 3 chr15 23154940 23155245 -80339729 - L1_Mus3 LINE L1 -4 6634 6328 2 761 3187 116 36 8 chr15 23155245 23155751 -80339223 - Lx3_Mus LINE L1 -433 6576 6057 2 761 208 225 0 0 chr15 23159205 23159245 -80335729 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 761 2972 210 82 5 chr15 23159367 23159999 -80334975 + Lx5 LINE L1 6365 7045 -5 2 761 281 369 65 65 chr15 23160085 23160302 -80334672 + MER58A DNA MER1_type 2 218 -6 2 761 573 333 18 97 chr15 23160560 23160786 -80334188 - B4 SINE B4 -76 216 9 2 761 696 107 0 0 chr15 23161825 23161928 -80333046 + (TA)n Simple_repeat Simple_repeat 1 103 0 2 761 247 349 81 18 chr15 23162240 23162462 -80332512 - Lx8 LINE L1 -557 6916 6681 2 761 290 346 40 81 chr15 23162643 23162791 -80332183 - MER20 DNA MER1_type -76 143 2 2 761 25 0 0 0 chr15 23162946 23162971 -80332003 + AT_rich Low_complexity Low_complexity 1 25 0 2 761 7567 86 2 24 chr15 23163288 23164825 -80330149 - L1Md_F2 LINE L1 -12 6570 5102 2 761 249 333 56 19 chr15 23165080 23165187 -80329787 - ORR1E LTR MaLR -223 136 26 2 761 552 330 107 46 chr15 23166189 23166516 -80328458 - ORR1E LTR MaLR -1 358 12 2 761 324 309 138 58 chr15 23167582 23167771 -80327203 - B4A SINE B4 -86 206 3 2 761 882 113 0 0 chr15 23168164 23168306 -80326668 + (CA)n Simple_repeat Simple_repeat 2 143 0 2 761 291 54 0 0 chr15 23168464 23168501 -80326473 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 761 641 279 61 87 chr15 23169166 23169704 -80325270 - L1_Mur3 LINE L1 -2681 3199 2676 2 761 227 208 19 0 chr15 23169725 23169778 -80325196 - L1_Mur3 LINE L1 -3681 2199 2146 2 761 381 32 48 0 chr15 23169846 23169909 -80325065 + (TTG)n Simple_repeat Simple_repeat 1 66 0 2 761 1107 45 0 0 chr15 23169909 23170043 -80324931 - B1_Mus2 SINE Alu -13 134 1 2 761 3076 8 43 0 chr15 23170137 23170489 -80324485 - IAPLTR1_Mm LTR ERVK 0 367 1 2 761 55589 21 17 2 chr15 23170489 23176867 -80318107 - IAPEz-int LTR ERVK 0 6481 8 2 761 3076 8 43 0 chr15 23176867 23177219 -80317755 - IAPLTR1_Mm LTR ERVK 0 367 1 2 761 261 313 50 60 chr15 23177277 23177559 -80317415 - L1_Mur3 LINE L1 -3961 1919 1641 2 761 518 67 13 0 chr15 23177559 23177634 -80317340 + (TTCC)n Simple_repeat Simple_repeat 2 77 0 2 761 305 288 120 13 chr15 23177656 23177996 -80316978 - L1_Mur3 LINE L1 -4236 1644 1256 2 761 219 157 0 0 chr15 23178029 23178080 -80316894 + T-rich Low_complexity Low_complexity 1 51 0 2 761 408 387 52 40 chr15 23178313 23178641 -80316333 - MER89 LTR ERV1 -225 334 3 2 761 597 329 10 0 chr15 23178766 23178973 -80316001 - Lx8 LINE L1 -609 6864 6656 2 761 1075 200 16 116 chr15 23179786 23179978 -80314996 - RMER17C LTR ERVK -1 409 228 2 761 300 91 0 0 chr15 23179978 23180022 -80314952 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 761 1075 200 16 116 chr15 23180022 23180208 -80314766 - RMER17C LTR ERVK -183 227 69 2 761 34560 30 0 0 chr15 23180472 23185383 -80309591 - L1Md_T LINE L1 0 6582 1672 2 761 300 246 0 0 chr15 23185384 23185449 -80309525 + RLTR23 LTR ERV1 366 430 0 2 761 1713 134 4 4 chr15 23185577 23185855 -80309119 - Lx2 LINE L1 -1 6996 6719 2 761 458 202 0 0 chr15 23185876 23185955 -80309019 - RMER17C LTR ERVK -328 82 4 2 761 438 320 64 17 chr15 23186359 23186531 -80308443 - B3A SINE B2 -15 183 4 2 761 875 133 6 0 chr15 23186917 23187082 -80307892 + (TG)n Simple_repeat Simple_repeat 1 166 0 2 761 410 308 14 58 chr15 23187102 23187240 -80307734 - RSINE1 SINE B4 0 165 34 2 761 23 0 0 0 chr15 23187337 23187360 -80307614 + AT_rich Low_complexity Low_complexity 1 23 0 2 761 467 299 53 26 chr15 23189036 23189225 -80305749 + B3A SINE B2 1 194 -4 2 761 22 0 0 0 chr15 23190726 23190748 -80304226 + AT_rich Low_complexity Low_complexity 1 22 0 2 761 272 96 0 37 chr15 23190968 23191022 -80303952 + (TCTCTG)n Simple_repeat Simple_repeat 6 57 0 2 761 289 359 9 0 chr15 23191438 23191544 -80303430 - Lx9 LINE L1 -1137 6507 6401 2 761 1110 52 0 0 chr15 23193192 23193327 -80301647 + B1_Mus1 SINE Alu 2 136 -12 2 761 981 131 6 11 chr15 23193328 23193506 -80301468 + (GAA)n Simple_repeat Simple_repeat 2 178 0 2 761 240 35 0 0 chr15 23193506 23193535 -80301439 + (GGA)n Simple_repeat Simple_repeat 2 30 0 2 761 1347 72 0 0 chr15 23193535 23193715 -80301259 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 761 225 0 0 0 chr15 23193715 23193739 -80301235 + (CAG)n Simple_repeat Simple_repeat 2 26 0 2 761 26 64 0 0 chr15 23194076 23194123 -80300851 + AT_rich Low_complexity Low_complexity 1 47 0 2 761 222 37 0 0 chr15 23194405 23194432 -80300542 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2 761 4027 64 0 15 chr15 23194441 23194965 -80300009 - L1_Mus1 LINE L1 0 6567 6052 2 761 384 22 0 0 chr15 23195700 23195745 -80299229 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 761 2330 79 9 15 chr15 23196367 23196612 -80298362 - MTB LTR MaLR -69 331 90 2 761 3770 64 2 75 chr15 23196612 23197155 -80297819 + RLTR1C LTR ERV1 1 503 0 2 761 2330 79 9 15 chr15 23197155 23197242 -80297732 - MTB LTR MaLR -311 89 1 2 761 4575 102 62 13 chr15 23197406 23198585 -80296389 - L1_Mur1 LINE L1 -3951 1935 676 2 761 2488 247 64 162 chr15 23198577 23198625 -80296349 - Lx7 LINE L1 -400 7296 7247 2 761 1250 97 27 5 chr15 23198625 23198811 -80296163 + B2_Mm2 SINE B2 1 190 -5 2 761 2488 247 64 162 chr15 23198811 23199440 -80295534 - Lx7 LINE L1 -450 7246 6609 2 761 518 267 76 0 chr15 23199440 23199532 -80295442 - MTC LTR MaLR -165 256 155 2 761 315 0 0 0 chr15 23199532 23199567 -80295407 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 761 518 267 76 0 chr15 23199567 23199605 -80295369 - MTC LTR MaLR -267 154 117 2 95 2488 247 64 162 chr15 23199605 23200163 -80294811 - Lx7 LINE L1 -1088 6608 6064 2 762 566 185 0 12 chr15 23200170 23200295 -80294679 - Lx7 LINE L1 -1569 5891 5772 2 762 813 231 4 82 chr15 23200455 23200710 -80294264 - Lx2B LINE L1 -21 6979 6745 2 762 344 315 84 38 chr15 23200731 23200983 -80293991 - Lx7 LINE L1 -656 6817 6563 3 762 270 143 0 0 chr15 23201152 23201201 -80293773 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 762 387 0 0 0 chr15 23201203 23201246 -80293728 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 762 272 358 0 0 chr15 23201269 23201336 -80293638 + ID2 SINE ID 11 77 -6 3 762 26 0 0 0 chr15 23202925 23202951 -80292023 + AT_rich Low_complexity Low_complexity 1 26 0 3 762 296 64 21 0 chr15 23203428 23203475 -80291499 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 3 762 337 237 26 0 chr15 23203481 23203557 -80291417 - B1_Mus2 SINE Alu -28 119 42 3 762 198 0 0 0 chr15 23204265 23204287 -80290687 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 3 762 513 115 0 0 chr15 23205248 23205335 -80289639 + (TC)n Simple_repeat Simple_repeat 1 87 0 3 762 250 319 47 45 chr15 23205339 23205449 -80289525 - PB1D10 SINE Alu -2 125 9 3 762 524 273 40 23 chr15 23208482 23208658 -80286316 + B3A SINE B2 4 182 -16 3 762 369 0 0 0 chr15 23208921 23208962 -80286012 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 762 240 308 0 25 chr15 23209024 23209104 -80285870 - B4A SINE B4 -213 79 2 3 762 286 387 29 7 chr15 23209252 23209390 -80285584 + B1F1 SINE Alu 7 147 -2 3 762 181 146 42 0 chr15 23209473 23209521 -80285453 + (TAA)n Simple_repeat Simple_repeat 2 51 0 3 762 216 328 23 83 chr15 23210094 23210227 -80284747 + PB1 SINE Alu 1 125 -2 3 762 720 64 0 0 chr15 23210475 23210569 -80284405 + (TA)n Simple_repeat Simple_repeat 2 95 0 3 762 688 112 133 47 chr15 23210660 23210810 -80284164 - MTB_Mm LTR MaLR -54 353 191 3 762 40 0 0 0 chr15 23210818 23210858 -80284116 + AT_rich Low_complexity Low_complexity 1 40 0 3 762 9246 110 2 45 chr15 23210870 23212388 -80282586 - Lx3_Mus LINE L1 0 7009 5557 3 762 1025 79 7 0 chr15 23212388 23212528 -80282446 + B2_Mm2 SINE B2 17 157 -38 3 762 624 27 0 0 chr15 23212591 23212665 -80282309 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 3 762 4314 203 57 15 chr15 23212669 23213640 -80281334 - Lx3C LINE L1 -4 6972 5962 3 762 244 328 92 72 chr15 23213927 23214177 -80280797 - LTR33A LTR ERVL -3 517 263 3 762 1843 185 23 36 chr15 23214343 23214736 -80280238 + Lx2B LINE L1 6595 6982 -18 3 762 657 110 0 0 chr15 23214736 23214836 -80280138 + (TG)n Simple_repeat Simple_repeat 2 101 0 3 762 561 76 0 0 chr15 23214836 23214915 -80280059 + (TA)n Simple_repeat Simple_repeat 1 79 0 3 762 255 191 0 0 chr15 23215414 23215482 -80279492 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 762 736 238 16 0 chr15 23215503 23215692 -80279282 - Lx3_Mus LINE L1 -1248 4629 4438 3 762 738 302 20 51 chr15 23215759 23216052 -80278922 + Lx7 LINE L1 7038 7321 -375 3 762 2304 142 20 10 chr15 23216249 23216646 -80278328 + Lx2B LINE L1 6594 6994 -6 3 762 24 32 0 0 chr15 23216786 23216817 -80278157 + AT_rich Low_complexity Low_complexity 1 31 0 3 762 270 0 0 0 chr15 23218050 23218080 -80276894 + (TA)n Simple_repeat Simple_repeat 1 30 0 3 762 250 145 32 16 chr15 23218798 23218861 -80276113 + (CAAA)n Simple_repeat Simple_repeat 2 65 0 3 762 453 351 23 28 chr15 23219056 23219273 -80275701 - B3 SINE B2 0 216 1 3 762 235 129 16 31 chr15 23219275 23219339 -80275635 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 3 762 269 285 91 15 chr15 23219479 23219611 -80275363 + ID_B1 SINE B4 83 224 0 3 762 37898 31 0 0 chr15 23221036 23227687 -80267287 - L1Md_T LINE L1 0 6585 1 3 762 777 330 48 41 chr15 23228863 23229179 -80265795 + MTE2b LTR MaLR 46 363 -16 3 762 2086 80 70 3 chr15 23229179 23229479 -80265495 - L1_Mus1 LINE L1 -336 6231 5912 3 762 2188 83 19 9 chr15 23229479 23229796 -80265178 + L1_Mus1 LINE L1 6247 6566 -1 3 762 21 0 0 0 chr15 23230218 23230239 -80264735 + AT_rich Low_complexity Low_complexity 1 21 0 3 762 607 216 0 0 chr15 23230295 23230406 -80264568 - B3 SINE B2 -103 113 3 3 762 205 135 19 19 chr15 23230422 23230475 -80264499 + CT-rich Low_complexity Low_complexity 3 55 0 3 762 278 338 38 0 chr15 23230476 23230633 -80264341 - L1M3 LINE L1 -1120 5020 4858 3 762 651 152 0 0 chr15 23231061 23231173 -80263801 + (TA)n Simple_repeat Simple_repeat 2 113 0 3 762 322 312 22 11 chr15 23231812 23231931 -80263043 + PB1D10 SINE Alu 3 134 -15 3 762 1056 239 175 14 chr15 23232111 23232556 -80262418 - Lx9 LINE L1 -53 7591 7075 3 762 280 232 0 0 chr15 23232580 23232636 -80262338 - Lx9 LINE L1 -628 7016 6961 3 762 5747 259 44 73 chr15 23232651 23235020 -80259954 - Lx7 LINE L1 0 7696 5406 3 762 411 21 0 0 chr15 23235491 23235539 -80259435 + (TC)n Simple_repeat Simple_repeat 2 49 0 3 762 519 17 0 0 chr15 23235539 23235598 -80259376 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 762 627 14 0 0 chr15 23235598 23235669 -80259305 + (GA)n Simple_repeat Simple_repeat 1 72 0 3 762 426 299 19 0 chr15 23235672 23235779 -80259195 - RSINE1 SINE B4 -52 113 5 3 762 25 31 0 0 chr15 23237502 23237534 -80257440 + AT_rich Low_complexity Low_complexity 1 32 0 3 762 1083 239 80 53 chr15 23237673 23237974 -80257000 + ORR1B2 LTR MaLR 1 309 -58 3 762 1057 267 140 35 chr15 23238119 23238369 -80256605 - RLTR40 LTR ERVK -19 798 521 3 762 438 20 0 0 chr15 23238369 23238420 -80256554 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 762 1057 267 140 35 chr15 23238420 23238569 -80256405 - RLTR40 LTR ERVK -297 520 357 3 762 24 0 0 0 chr15 23238574 23238598 -80256376 + AT_rich Low_complexity Low_complexity 1 24 0 3 762 2316 199 7 7 chr15 23238598 23239044 -80255930 - Lx4A LINE L1 -3 7055 6610 3 762 627 290 5 32 chr15 23239045 23239266 -80255708 + Lx2B LINE L1 6766 6980 -20 3 762 4204 189 40 8 chr15 23239273 23240074 -80254900 - Lx4A LINE L1 -454 6604 5778 3 762 1810 139 173 0 chr15 23240081 23240326 -80254648 - Lx4A LINE L1 -334 5543 5252 3 762 5991 143 15 18 chr15 23240326 23241363 -80253611 - Lx3A LINE L1 -10 6971 5938 3 762 1810 139 173 0 chr15 23241363 23241476 -80253498 - Lx4A LINE L1 -626 5251 5125 3 762 1684 137 14 3 chr15 23241478 23241772 -80253202 - Lx4A LINE L1 -998 4879 4583 3 762 24 53 0 0 chr15 23242538 23242576 -80252398 + AT_rich Low_complexity Low_complexity 1 38 0 3 762 285 303 13 0 chr15 23243411 23243487 -80251487 + B3 SINE B2 84 160 -56 3 762 650 47 12 0 chr15 23243523 23243609 -80251365 + (TTTTG)n Simple_repeat Simple_repeat 2 88 0 3 762 1064 75 0 0 chr15 23243612 23243745 -80251229 - B1_Mm SINE Alu -13 134 2 3 762 219 136 16 33 chr15 23244080 23244141 -80250833 + (TATATG)n Simple_repeat Simple_repeat 1 60 0 3 762 418 97 43 43 chr15 23245268 23245429 -80249545 + T-rich Low_complexity Low_complexity 1 161 0 3 762 382 316 50 0 chr15 23245746 23245777 -80249197 - RSINE1 SINE B4 -17 148 118 3 762 240 35 0 0 chr15 23245777 23245806 -80249168 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3 762 382 316 50 0 chr15 23245806 23245913 -80249061 - RSINE1 SINE B4 -48 117 4 3 762 228 274 96 19 chr15 23246300 23246404 -80248570 - PB1D9 SINE Alu 0 120 9 3 762 323 372 70 66 chr15 23246496 23246936 -80248038 - MLT1E3 LTR MaLR -85 539 98 3 762 315 0 0 0 chr15 23247138 23247173 -80247801 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 762 321 274 39 135 chr15 23248071 23248214 -80246760 - RLTR12B LTR ERVK -300 228 105 3 762 501 17 0 0 chr15 23248214 23248272 -80246702 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 3 762 321 274 39 135 chr15 23248272 23248335 -80246639 - RLTR12B LTR ERVK -424 104 42 3 762 23 0 0 0 chr15 23248622 23248645 -80246329 + AT_rich Low_complexity Low_complexity 1 23 0 3 762 233 320 84 23 chr15 23248645 23248776 -80246198 - MLT1A0 LTR MaLR -61 304 166 3 762 432 0 0 0 chr15 23249174 23249222 -80245752 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 762 201 266 37 0 chr15 23249828 23249937 -80245037 + (CATATA)n Simple_repeat Simple_repeat 1 113 0 3 762 898 297 45 3 chr15 23251453 23251767 -80243207 - Lx6 LINE L1 -21 7439 7113 3 762 22 35 0 0 chr15 23251769 23251798 -80243176 + AT_rich Low_complexity Low_complexity 1 29 0 3 762 299 186 0 10 chr15 23253057 23253155 -80241819 + CT-rich Low_complexity Low_complexity 1 97 0 3 762 264 304 37 37 chr15 23253200 23253282 -80241692 - PB1D10 SINE Alu -8 109 28 3 762 371 318 49 63 chr15 23253770 23254199 -80240775 - L1M2 LINE L1 -504 5796 5374 3 762 385 340 13 13 chr15 23254296 23254445 -80240529 + Lx8 LINE L1 7146 7294 -179 3 762 21 0 0 0 chr15 23254841 23254862 -80240112 + AT_rich Low_complexity Low_complexity 1 21 0 3 762 235 366 32 13 chr15 23254904 23255059 -80239915 - Lx7 LINE L1 -539 7157 7000 3 762 401 289 36 132 chr15 23255393 23255644 -80239330 - Lx8 LINE L1 -2 7471 7245 3 762 208 135 0 0 chr15 23257249 23257286 -80237688 + (A)n Simple_repeat Simple_repeat 1 37 0 3 762 1377 276 59 23 chr15 23257905 23258383 -80236591 + RMER5 LTR ERV1 14 508 -26 3 762 384 153 0 0 chr15 23258392 23258464 -80236510 + Lx3A LINE L1 6891 6962 -19 3 762 306 0 0 0 chr15 23258469 23258503 -80236471 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 3 762 254 73 24 0 chr15 23258518 23258559 -80236415 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 3 762 1090 113 0 0 chr15 23258646 23258814 -80236160 - L1Md_F2 LINE L1 -12 6570 6403 3 762 1061 107 0 0 chr15 23258842 23258991 -80235983 + B2_Mm2 SINE B2 10 158 -37 3 762 387 0 0 0 chr15 23258992 23259035 -80235939 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 3 762 26 0 0 0 chr15 23261656 23261682 -80233292 + AT_rich Low_complexity Low_complexity 1 26 0 3 762 25 0 0 0 chr15 23262133 23262158 -80232816 + AT_rich Low_complexity Low_complexity 1 25 0 3 762 265 265 33 25 chr15 23262238 23262358 -80232616 - L1MA7 LINE L1 -352 5939 5819 3 762 274 181 94 52 chr15 23262419 23262576 -80232398 + Lx9 LINE L1 7444 7640 -4 3 762 371 330 56 38 chr15 23262724 23263406 -80231568 - L1MA7 LINE L1 -477 5691 4993 3 762 249 211 0 0 chr15 23263526 23263583 -80231391 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 3 762 296 265 124 13 chr15 23263730 23263883 -80231091 - L1MA7 LINE L1 -2532 3608 3439 3 762 899 239 39 35 chr15 23263930 23264186 -80230788 + Lx5 LINE L1 6794 7050 0 3 762 352 285 139 0 chr15 23264684 23264856 -80230118 + Lx9 LINE L1 7283 7478 -166 3 762 360 88 0 0 chr15 23264856 23264913 -80230061 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 762 225 65 0 0 chr15 23264920 23264951 -80230023 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 4 762 33 43 0 0 chr15 23265697 23265744 -80229230 + AT_rich Low_complexity Low_complexity 1 47 0 4 762 1287 247 122 69 chr15 23267815 23268057 -80226917 - Lx7 LINE L1 0 7696 7436 4 762 192 40 0 0 chr15 23268057 23268082 -80226892 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 762 1287 247 122 69 chr15 23268082 23268431 -80226543 - Lx7 LINE L1 -261 7435 7075 4 762 3424 128 4 15 chr15 23268486 23269009 -80225965 - Lx2 LINE L1 -5 6992 6476 4 762 21 0 0 0 chr15 23269352 23269373 -80225601 + AT_rich Low_complexity Low_complexity 1 21 0 4 762 4556 120 21 4 chr15 23270788 23271493 -80223481 - Lx3_Mus LINE L1 -8 7001 6285 4 762 323 173 0 0 chr15 23271493 23271545 -80223429 - Lx3_Mus LINE L1 -696 6313 6262 4 762 180 302 56 19 chr15 23271753 23271807 -80223167 - MIR SINE MIR -120 88 33 4 762 3482 101 2 10 chr15 23272163 23272665 -80222309 - L1_Mus2 LINE L1 0 6566 6069 4 762 7256 107 13 10 chr15 23272667 23273745 -80221229 - L1_Mm LINE L1 -35 5848 4768 4 762 451 57 0 0 chr15 23273744 23273801 -80221173 - L1_Mm LINE L1 -1267 4879 4794 4 762 3401 127 4 15 chr15 23273801 23274320 -80220654 - Lx2 LINE L1 -9 6988 6476 4 762 291 259 0 23 chr15 23274320 23274349 -80220625 - L1_Mm LINE L1 -1324 4822 4796 4 762 21 0 0 0 chr15 23274663 23274684 -80220290 + AT_rich Low_complexity Low_complexity 1 21 0 4 762 4556 120 21 4 chr15 23276099 23276804 -80218170 - Lx3_Mus LINE L1 -8 7001 6285 4 762 323 173 0 0 chr15 23276804 23276856 -80218118 - Lx3_Mus LINE L1 -696 6313 6262 4 762 180 302 56 19 chr15 23277064 23277118 -80217856 - MIR SINE MIR -120 88 33 4 762 3482 101 2 10 chr15 23277474 23277976 -80216998 - L1_Mus2 LINE L1 0 6566 6069 4 762 10425 102 15 56 chr15 23277978 23279687 -80215287 - L1_Mm LINE L1 -35 5848 4211 4 762 537 16 0 0 chr15 23279689 23279751 -80215223 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 762 263 77 0 0 chr15 23279753 23279792 -80215182 - L1_Mm LINE L1 -1741 4142 4104 4 762 4831 109 20 4 chr15 23279785 23280519 -80214455 + L1_Mm LINE L1 3356 4101 -1782 4 762 360 0 0 0 chr15 23282151 23282191 -80212783 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 762 295 336 87 0 chr15 23282841 23282990 -80211984 + L2 LINE L2 2039 2200 -1219 4 762 579 29 0 0 chr15 23283199 23283268 -80211706 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 762 180 386 57 0 chr15 23283516 23283604 -80211370 + L2 LINE L2 2819 2911 -508 4 762 291 329 111 61 chr15 23284215 23284477 -80210497 - MER63D DNA AcHobo -601 460 186 4 762 3436 130 43 0 chr15 23284540 23285102 -80209872 + Lx2 LINE L1 6412 6997 0 4 762 328 114 0 0 chr15 23285537 23285581 -80209393 + B1_Mm SINE Alu 62 105 -42 4 762 278 123 0 17 chr15 23285612 23285670 -80209304 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 762 191 136 32 74 chr15 23285895 23285990 -80208984 + (TATAA)n Simple_repeat Simple_repeat 4 94 0 4 762 21 0 0 0 chr15 23286065 23286086 -80208888 + AT_rich Low_complexity Low_complexity 1 21 0 4 762 6556 135 20 26 chr15 23286126 23286167 -80208807 - Lx LINE L1 -6 6648 6606 4 762 3500 169 61 1 chr15 23286167 23286820 -80208154 - RLTR17 LTR ERVK 0 692 1 4 762 6556 152 39 14 chr15 23286820 23288787 -80206187 - Lx LINE L1 -49 6605 4579 4 762 1554 141 12 0 chr15 23288786 23289042 -80205932 + L1_Mur2 LINE L1 4332 4590 -1287 4 762 1104 89 0 0 chr15 23289315 23289495 -80205479 + (TTC)n Simple_repeat Simple_repeat 1 180 0 4 762 502 215 15 0 chr15 23289496 23289631 -80205343 + CT-rich Low_complexity Low_complexity 1 137 0 4 762 234 228 0 102 chr15 23289635 23289762 -80205212 - Lx9 LINE L1 -22 7622 7509 4 762 544 14 14 14 chr15 23290180 23290254 -80204720 + (TCTA)n Simple_repeat Simple_repeat 2 75 0 4 762 25 31 0 0 chr15 23290607 23290639 -80204335 + AT_rich Low_complexity Low_complexity 1 32 0 4 762 545 79 52 9 chr15 23290818 23290933 -80204041 + (TA)n Simple_repeat Simple_repeat 2 121 0 4 762 26 30 0 0 chr15 23292245 23292278 -80202696 + AT_rich Low_complexity Low_complexity 1 33 0 4 762 7264 17 0 0 chr15 23292354 23293194 -80201780 - L1_Mm LINE L1 -442 5441 4602 4 762 3160 68 0 0 chr15 23293194 23293605 -80201369 + L1Md_A LINE L1 6172 6582 0 4 762 351 0 0 0 chr15 23294661 23294700 -80200274 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 4 762 954 0 0 0 chr15 23294904 23295010 -80199964 + (TTTCC)n Simple_repeat Simple_repeat 5 110 0 4 762 299 25 0 24 chr15 23295010 23295051 -80199923 + (CCCCCT)n Simple_repeat Simple_repeat 1 40 0 4 762 3655 106 7 12 chr15 23295078 23295641 -80199333 - Lx3_Mus LINE L1 -13 6996 6437 4 762 3818 108 27 7 chr15 23295641 23296235 -80198739 - L1_Mur1 LINE L1 -1305 4581 3976 4 762 457 195 0 24 chr15 23296278 23296362 -80198612 - L1_Mur1 LINE L1 -2058 3828 3747 4 762 210 240 0 20 chr15 23297155 23297206 -80197768 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 762 650 269 132 30 chr15 23297496 23297730 -80197244 - Lx9 LINE L1 -157 7316 7059 4 762 459 0 0 0 chr15 23299620 23299671 -80195303 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 762 1466 324 93 19 chr15 23299972 23300652 -80194322 + Tigger1 DNA MER2_type 184 913 -1505 4 762 296 292 167 35 chr15 23300665 23300822 -80194152 + B3A SINE B2 3 175 -41 4 762 342 0 0 0 chr15 23300822 23300860 -80194114 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 762 296 297 122 83 chr15 23300860 23300895 -80194079 + B3A SINE B2 176 211 -5 4 762 939 324 128 50 chr15 23300900 23301969 -80193005 + Tigger1 DNA MER2_type 934 2084 -334 4 762 232 397 52 22 chr15 23301976 23302110 -80192864 + ID_B1 SINE B4 82 219 -5 4 762 687 108 0 0 chr15 23302157 23302259 -80192715 + (GGGA)n Simple_repeat Simple_repeat 3 104 0 4 762 218 254 28 0 chr15 23302576 23302718 -80192256 + (TA)n Simple_repeat Simple_repeat 1 146 0 4 762 914 328 68 24 chr15 23302746 23303355 -80191619 - Lx9 LINE L1 -492 7152 6537 4 762 1460 280 71 12 chr15 23303364 23303407 -80191567 + L1_Rod LINE L1 3846 3888 -1959 4 762 555 118 58 10 chr15 23303407 23303510 -80191464 + Lx2 LINE L1 6890 6997 0 4 762 1460 280 71 12 chr15 23303510 23304027 -80190947 + L1_Rod LINE L1 3889 4439 -1408 4 762 307 217 74 8 chr15 23304042 23304163 -80190811 + L1_Rod LINE L1 4555 4683 -1164 4 762 242 73 0 24 chr15 23304401 23304443 -80190531 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 4 762 389 95 0 16 chr15 23304557 23304621 -80190353 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 762 286 317 41 23 chr15 23305305 23305476 -80189498 - MER67C LTR ERV1 -537 174 1 4 762 5056 48 8 0 chr15 23305674 23306302 -80188672 - L1Md_F2 LINE L1 0 6582 5950 4 762 33 43 0 0 chr15 23306321 23306368 -80188606 + AT_rich Low_complexity Low_complexity 1 47 0 4 762 21 0 0 0 chr15 23306400 23306421 -80188553 + AT_rich Low_complexity Low_complexity 1 21 0 4 762 924 243 21 39 chr15 23306571 23306901 -80188073 - L1_Rod LINE L1 -241 5606 5283 4 762 938 238 53 0 chr15 23306907 23307189 -80187785 + Lx9 LINE L1 7333 7629 -15 4 762 201 129 0 0 chr15 23307494 23307525 -80187449 + (TGG)n Simple_repeat Simple_repeat 1 31 0 4 762 3265 157 38 24 chr15 23307562 23308145 -80186829 - Lx3B LINE L1 -5 6968 6378 4 762 1072 314 49 34 chr15 23308145 23308857 -80186117 - L1_Mur3 LINE L1 -732 5148 4426 4 762 2250 110 48 6 chr15 23308885 23309242 -80185732 + Lx LINE L1 6283 6654 0 4 762 276 261 128 17 chr15 23309326 23309505 -80185469 - L1M2 LINE L1 -1880 4263 4065 4 762 1237 325 107 29 chr15 23309819 23310683 -80184291 - Lx8 LINE L1 -453 7020 6090 4 762 32 67 0 0 chr15 23311109 23311169 -80183805 + AT_rich Low_complexity Low_complexity 1 60 0 4 762 23 0 0 0 chr15 23311195 23311218 -80183756 + AT_rich Low_complexity Low_complexity 1 23 0 4 762 29 28 0 0 chr15 23311792 23311828 -80183146 + AT_rich Low_complexity Low_complexity 1 36 0 4 762 3144 155 57 12 chr15 23311839 23312440 -80182534 - L1_Mus2 LINE L1 0 6566 5939 4 762 441 122 0 0 chr15 23312797 23312871 -80182103 + (TG)n Simple_repeat Simple_repeat 1 74 0 4 762 1242 281 73 102 chr15 23313083 23313712 -80181262 - RMER13A LTR ERVK -249 611 1 4 762 22 0 0 0 chr15 23313898 23313920 -80181054 + AT_rich Low_complexity Low_complexity 1 22 0 4 762 1129 88 0 0 chr15 23314056 23314203 -80180771 + B1_Mus1 SINE Alu 2 148 0 4 762 1151 68 7 0 chr15 23314300 23314447 -80180527 + B1_Mus1 SINE Alu 1 148 0 4 762 1762 188 73 11 chr15 23314688 23315059 -80179915 - ORR1B1 LTR MaLR 0 394 1 4 762 407 318 89 5 chr15 23316042 23316232 -80178742 - B3 SINE B2 -6 210 5 4 762 1738 336 44 29 chr15 23316843 23317803 -80177171 - Lx7 LINE L1 -396 7300 6327 4 762 275 250 63 38 chr15 23317875 23317954 -80177020 - B3 SINE B2 0 216 136 4 762 30 0 0 0 chr15 23318482 23318512 -80176462 + AT_rich Low_complexity Low_complexity 1 30 0 4 762 4074 52 2 0 chr15 23318635 23319136 -80175838 - L1_Mus1 LINE L1 -396 6171 5670 4 762 2948 69 8 5 chr15 23319136 23319528 -80175446 + L1_Mus1 LINE L1 6174 6566 -1 4 762 199 191 14 14 chr15 23319633 23319702 -80175272 + (TA)n Simple_repeat Simple_repeat 2 70 0 4 762 532 337 35 35 chr15 23322693 23322982 -80171992 - Lx7 LINE L1 -385 7311 7023 4 762 542 250 199 41 chr15 23322986 23323106 -80171868 - RLTR25B LTR ERVK -2 1026 903 4 762 549 0 0 0 chr15 23323106 23323167 -80171807 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 762 542 250 199 41 chr15 23323167 23323292 -80171682 - RLTR25B LTR ERVK -126 902 742 4 762 3489 183 114 29 chr15 23323361 23324222 -80170752 - RLTR25A LTR ERVK -157 871 1 4 762 306 359 20 20 chr15 23324228 23324376 -80170598 - Lx7 LINE L1 -675 7021 6874 4 762 1629 306 55 37 chr15 23324387 23325173 -80169801 + Lx7 LINE L1 6061 6860 -836 4 762 225 0 0 0 chr15 23325177 23325202 -80169772 + (TTAA)n Simple_repeat Simple_repeat 3 27 0 4 762 217 369 0 0 chr15 23325216 23325281 -80169693 + ID4_ SINE ID 14 78 -5 4 762 347 0 23 0 chr15 23325352 23325395 -80169579 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 762 464 247 112 31 chr15 23327173 23327369 -80167605 - B3 SINE B2 -4 212 1 4 762 286 355 127 48 chr15 23327989 23328305 -80166669 + MLT1A0 LTR MaLR 25 365 0 4 762 26 88 0 0 chr15 23328712 23328780 -80166194 + AT_rich Low_complexity Low_complexity 1 68 0 4 762 25 51 0 0 chr15 23328847 23328886 -80166088 + AT_rich Low_complexity Low_complexity 1 39 0 4 762 23 0 0 0 chr15 23328924 23328947 -80166027 + AT_rich Low_complexity Low_complexity 1 23 0 4 762 541 36 59 12 chr15 23329006 23329091 -80165883 - L1Md_F3 LINE L1 0 6584 6496 4 762 1003 212 132 36 chr15 23329483 23329786 -80165188 + IAPEY3_LTR LTR ERVK 1 332 0 4 762 844 200 0 0 chr15 23329830 23329980 -80164994 - B1_Mur4 SINE Alu 0 150 1 5 763 510 91 0 0 chr15 23330956 23331033 -80163941 + (CA)n Simple_repeat Simple_repeat 2 78 0 5 763 264 200 0 0 chr15 23331078 23331143 -80163831 + (CAGA)n Simple_repeat Simple_repeat 4 68 0 5 763 1523 167 32 102 chr15 23332162 23332293 -80162681 - RMER17C LTR ERVK 0 410 283 5 763 641 76 11 0 chr15 23332293 23332385 -80162589 + (TCTA)n Simple_repeat Simple_repeat 1 93 0 5 763 1523 167 32 102 chr15 23332385 23332694 -80162280 - RMER17C LTR ERVK -128 282 1 5 763 1272 215 67 98 chr15 23332889 23333265 -80161709 - RLTR24 LTR ERV1 0 529 166 5 763 1255 72 33 11 chr15 23335201 23335384 -80159590 + B2_Mm2 SINE B2 1 187 -8 5 763 22 35 0 0 chr15 23335388 23335417 -80159557 + AT_rich Low_complexity Low_complexity 1 29 0 5 763 348 103 15 0 chr15 23335635 23335703 -80159271 + Lx LINE L1 6586 6654 0 5 763 611 148 0 17 chr15 23335716 23335833 -80159141 + GA-rich Low_complexity Low_complexity 2 116 0 5 763 22 0 0 0 chr15 23336195 23336217 -80158757 + AT_rich Low_complexity Low_complexity 1 22 0 5 763 234 341 0 83 chr15 23338272 23338368 -80156606 - MTEa LTR MaLR -281 98 11 5 763 475 319 84 43 chr15 23338585 23339058 -80155916 - Lx2A LINE L1 -489 5814 5340 5 763 974 172 81 0 chr15 23339780 23339978 -80154996 - Lx2 LINE L1 0 6997 6784 5 763 341 284 0 0 chr15 23340107 23340195 -80154779 - B3A SINE B2 -103 95 8 5 763 5656 217 35 13 chr15 23341441 23343034 -80151940 - Lx5 LINE L1 -1 7049 5417 5 763 314 348 79 39 chr15 23343189 23343494 -80151480 - L1MB7 LINE L1 -327 5857 5541 5 763 657 313 93 40 chr15 23343695 23344144 -80150830 - Lx8 LINE L1 -6 7467 6995 5 763 25 31 0 0 chr15 23344317 23344349 -80150625 + AT_rich Low_complexity Low_complexity 1 32 0 5 763 1515 245 40 110 chr15 23345553 23346098 -80148876 - RLTR18B LTR ERVK -4 508 2 5 763 231 259 17 0 chr15 23346585 23346643 -80148331 + GA-rich Low_complexity Low_complexity 2 60 0 5 763 653 329 61 24 chr15 23346712 23347010 -80147964 - MLT2B4 LTR ERVL -96 318 11 5 763 1662 239 80 9 chr15 23347686 23348146 -80146828 - Lx4B LINE L1 -8 7050 6558 5 763 2673 205 82 21 chr15 23348147 23348812 -80146162 + RLTR25A LTR ERVK 239 913 -190 5 763 594 0 0 0 chr15 23348812 23348878 -80146096 + (GA)n Simple_repeat Simple_repeat 1 66 0 5 763 1503 220 59 59 chr15 23348878 23348907 -80146067 + RLTR25A LTR ERVK 861 885 -143 5 763 1792 150 4 212 chr15 23348923 23349455 -80145519 - RLTR23 LTR ERV1 0 430 10 5 763 813 162 178 19 chr15 23349496 23349704 -80145270 + RLTR25B LTR ERVK 788 1028 0 5 763 1299 175 92 10 chr15 23349705 23350016 -80144958 - Lx4B LINE L1 -1046 5930 5577 5 763 204 125 0 0 chr15 23350406 23350438 -80144536 + (T)n Simple_repeat Simple_repeat 1 32 0 5 763 369 0 0 0 chr15 23350917 23350958 -80144016 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 763 447 302 24 65 chr15 23351132 23351302 -80143672 - MTEb LTR MaLR -209 170 8 5 763 899 194 163 53 chr15 23352120 23352365 -80142609 - RLTR25B LTR ERVK 0 1028 757 5 763 663 231 44 73 chr15 23352435 23352640 -80142334 - RLTR25B LTR ERVK -824 204 6 5 763 247 104 0 40 chr15 23353148 23353198 -80141776 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 763 26 30 0 0 chr15 23353427 23353460 -80141514 + AT_rich Low_complexity Low_complexity 1 33 0 5 763 1674 70 4 47 chr15 23354060 23354313 -80140661 - L1Md_F2 LINE L1 -14 6568 6327 5 763 192 40 0 0 chr15 23354618 23354643 -80140331 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 763 332 378 20 35 chr15 23355352 23355522 -80139452 + B3A SINE B2 2 173 -25 5 763 453 19 0 0 chr15 23355522 23355576 -80139398 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 763 332 378 20 35 chr15 23355576 23355605 -80139369 + B3A SINE B2 174 198 0 5 763 435 310 39 0 chr15 23357528 23357657 -80137317 + RSINE1 SINE B4 15 148 -17 5 763 483 18 0 0 chr15 23357668 23357724 -80137250 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 763 225 0 0 0 chr15 23357724 23357748 -80137226 + (GA)n Simple_repeat Simple_repeat 2 26 0 5 763 198 91 0 0 chr15 23358174 23358207 -80136767 + (T)n Simple_repeat Simple_repeat 1 33 0 5 763 1276 75 20 63 chr15 23358349 23358581 -80136393 - ORR1A0 LTR MaLR -122 205 1 5 763 369 94 0 0 chr15 23358581 23358634 -80136340 - L1_Mus1 LINE L1 -182 6385 6333 5 763 1635 77 73 0 chr15 23358630 23358864 -80136110 + L1_Mus1 LINE L1 6077 6327 -240 5 763 658 90 19 39 chr15 23358864 23358968 -80136006 - B1_Mus1 SINE Alu -12 136 35 5 763 5032 43 2 3 chr15 23359123 23359751 -80135223 + L1Md_F2 LINE L1 5952 6578 -4 5 763 503 281 63 54 chr15 23360451 23360673 -80134301 + ID_B1 SINE B4 1 224 0 5 763 208 105 0 50 chr15 23360677 23360717 -80134257 + A-rich Low_complexity Low_complexity 4 41 0 5 763 440 296 0 9 chr15 23360922 23361038 -80133936 + B1_Mm SINE Alu 11 125 -22 5 763 435 19 0 0 chr15 23361619 23361671 -80133303 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 763 365 109 0 15 chr15 23361671 23361736 -80133238 + (GA)n Simple_repeat Simple_repeat 1 64 0 5 763 21 0 0 0 chr15 23362000 23362021 -80132953 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 3644 128 8 37 chr15 23362173 23362829 -80132145 - Lx3_Mus LINE L1 0 7009 6373 5 763 21 57 0 0 chr15 23363469 23363504 -80131470 + AT_rich Low_complexity Low_complexity 1 35 0 5 763 300 328 86 64 chr15 23363745 23364071 -80130903 - L1M5 LINE L1 -1479 4667 4335 5 763 1261 263 66 48 chr15 23364199 23364594 -80130380 + MTD LTR MaLR 18 419 0 5 763 305 82 0 20 chr15 23364700 23364750 -80130224 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 763 359 364 48 21 chr15 23365064 23365252 -80129722 - RMER30 DNA MER1_type -2 200 8 5 763 219 36 0 0 chr15 23366751 23366779 -80128195 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 763 242 68 45 0 chr15 23366779 23366823 -80128151 + (CAGAGA)n Simple_repeat Simple_repeat 2 47 0 5 763 186 133 0 0 chr15 23368506 23368536 -80126438 + (TA)n Simple_repeat Simple_repeat 1 30 0 5 763 215 31 31 0 chr15 23369470 23369502 -80125472 + (ATTTG)n Simple_repeat Simple_repeat 2 34 0 5 763 351 236 11 53 chr15 23370175 23370363 -80124611 + (TA)n Simple_repeat Simple_repeat 1 180 0 5 763 24 0 0 0 chr15 23370414 23370438 -80124536 + AT_rich Low_complexity Low_complexity 1 24 0 5 763 374 207 70 47 chr15 23370471 23370643 -80124331 + RMER17C LTR ERVK 91 266 -144 5 763 462 36 0 0 chr15 23370643 23370699 -80124275 + (CAAAA)n Simple_repeat Simple_repeat 5 60 0 5 763 24 0 0 0 chr15 23370787 23370811 -80124163 + AT_rich Low_complexity Low_complexity 1 24 0 5 763 582 352 9 9 chr15 23372254 23372466 -80122508 + ID_B1 SINE B4 4 215 -9 5 763 23 33 0 0 chr15 23373462 23373492 -80121482 + AT_rich Low_complexity Low_complexity 1 30 0 5 763 21 36 0 0 chr15 23376169 23376197 -80118777 + AT_rich Low_complexity Low_complexity 1 28 0 5 763 333 0 0 0 chr15 23376955 23376992 -80117982 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 763 2965 93 0 2 chr15 23377045 23377453 -80117521 - MTB_Mm LTR MaLR 0 407 1 5 763 504 0 0 0 chr15 23378071 23378127 -80116847 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 763 974 294 67 45 chr15 23379639 23380087 -80114887 - RMER5 LTR ERV1 -23 511 54 5 763 587 305 189 23 chr15 23380612 23380914 -80114060 + ORR1E LTR MaLR 3 354 -5 5 763 552 280 69 40 chr15 23380984 23381172 -80113802 + Lx9 LINE L1 7235 7425 -219 5 763 438 20 0 0 chr15 23381172 23381223 -80113751 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 763 552 280 69 40 chr15 23381223 23381309 -80113665 + Lx9 LINE L1 7426 7517 -127 5 763 23 68 0 0 chr15 23381664 23381708 -80113266 + AT_rich Low_complexity Low_complexity 1 44 0 5 763 393 164 0 0 chr15 23382569 23382642 -80112332 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 763 22 35 0 0 chr15 23383571 23383600 -80111374 + AT_rich Low_complexity Low_complexity 1 29 0 5 763 28 61 0 0 chr15 23383848 23383897 -80111077 + AT_rich Low_complexity Low_complexity 1 49 0 5 763 672 230 29 75 chr15 23383897 23384063 -80110911 + Lx9 LINE L1 7352 7517 -127 5 763 456 35 0 0 chr15 23384063 23384121 -80110853 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 763 672 230 29 75 chr15 23384121 23384260 -80110714 + Lx9 LINE L1 7518 7642 -2 5 763 203 200 48 32 chr15 23384673 23384735 -80110239 + T-rich Low_complexity Low_complexity 5 67 0 5 763 2048 138 107 3 chr15 23386029 23386414 -80108560 - Lx2 LINE L1 -67 6930 6506 5 763 21 57 0 0 chr15 23388352 23388387 -80106587 + AT_rich Low_complexity Low_complexity 1 35 0 5 763 23 54 0 0 chr15 23388782 23388819 -80106155 + AT_rich Low_complexity Low_complexity 1 37 0 5 763 293 76 61 0 chr15 23388898 23388964 -80106010 + (TA)n Simple_repeat Simple_repeat 1 70 0 5 763 206 250 31 0 chr15 23389006 23389070 -80105904 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 5 763 544 294 104 0 chr15 23389472 23389683 -80105291 - Lx8 LINE L1 -894 6579 6347 5 763 225 83 0 0 chr15 23390546 23390582 -80104392 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 763 1242 100 0 0 chr15 23390582 23390761 -80104213 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 763 25 0 0 0 chr15 23390921 23390946 -80104028 + AT_rich Low_complexity Low_complexity 1 25 0 5 763 387 192 47 29 chr15 23390985 23391157 -80103817 + GA-rich Low_complexity Low_complexity 4 178 0 5 763 211 148 0 122 chr15 23391204 23391327 -80103647 + G-rich Low_complexity Low_complexity 1 108 0 5 763 1006 25 0 86 chr15 23391332 23391507 -80103467 + (GGGAA)n Simple_repeat Simple_repeat 1 160 0 5 763 291 28 0 0 chr15 23391861 23391897 -80103077 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 763 37967 40 1 5 chr15 23392076 23398367 -80096607 - L1Md_T LINE L1 0 6585 250 5 763 3095 87 0 11 chr15 23398378 23398819 -80096155 - L1Md_F2 LINE L1 -14 6568 6133 5 763 26 30 0 0 chr15 23399730 23399763 -80095211 + AT_rich Low_complexity Low_complexity 1 33 0 5 763 232 119 17 17 chr15 23399872 23399932 -80095042 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 763 36 62 0 0 chr15 23400244 23400308 -80094666 + AT_rich Low_complexity Low_complexity 1 64 0 6 763 447 315 40 10 chr15 23400911 23401110 -80093864 + B3 SINE B2 3 207 -9 6 763 382 346 37 31 chr15 23401167 23401358 -80093616 + ID_B1 SINE B4 25 216 -8 6 763 364 325 129 41 chr15 23402250 23402420 -80092554 + B3 SINE B2 24 208 -8 6 763 261 0 0 0 chr15 23404181 23404210 -80090764 + (T)n Simple_repeat Simple_repeat 1 29 0 6 763 180 0 0 0 chr15 23405106 23405126 -80089848 + (T)n Simple_repeat Simple_repeat 1 20 0 6 763 328 305 11 0 chr15 23405345 23405440 -80089534 + MIRc SINE MIR 114 209 -59 6 763 26 50 0 0 chr15 23405598 23405638 -80089336 + AT_rich Low_complexity Low_complexity 1 40 0 6 763 23 33 0 0 chr15 23405846 23405876 -80089098 + AT_rich Low_complexity Low_complexity 1 30 0 6 763 22 0 0 0 chr15 23406347 23406369 -80088605 + AT_rich Low_complexity Low_complexity 1 22 0 6 763 283 236 19 136 chr15 23407678 23407781 -80087193 + MT2B LTR ERVL 174 264 -337 6 763 697 95 0 0 chr15 23407714 23407809 -80087165 + B1_Mm SINE Alu 46 140 -7 6 763 318 26 0 0 chr15 23407809 23407848 -80087126 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 763 28 0 0 0 chr15 23408792 23408820 -80086154 + AT_rich Low_complexity Low_complexity 1 28 0 6 763 315 0 0 0 chr15 23408925 23408960 -80086014 + (TC)n Simple_repeat Simple_repeat 2 36 0 6 763 207 0 0 0 chr15 23408960 23408982 -80085992 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 763 253 405 31 6 chr15 23408982 23409141 -80085833 - Lx8 LINE L1 -144 7329 7167 6 763 375 380 0 60 chr15 23409175 23409357 -80085617 + B4A SINE B4 122 292 0 6 763 504 32 0 0 chr15 23409383 23409445 -80085529 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 763 457 227 0 0 chr15 23410071 23410168 -80084806 + B1_Mus2 SINE Alu 41 137 -10 6 763 350 220 51 116 chr15 23410318 23410534 -80084440 + L1M5 LINE L1 2758 2959 -3187 6 763 6097 157 12 2 chr15 23410549 23411564 -80083410 + Lx LINE L1 5627 6651 -3 6 763 33 66 0 0 chr15 23411818 23411879 -80083095 + AT_rich Low_complexity Low_complexity 1 61 0 6 763 333 203 108 8 chr15 23411884 23412013 -80082961 + Lx9 LINE L1 7481 7622 -22 6 763 365 156 0 13 chr15 23412158 23412236 -80082738 + (TA)n Simple_repeat Simple_repeat 1 77 0 6 763 511 277 0 8 chr15 23413024 23413144 -80081830 - B4 SINE B4 -2 290 172 6 763 1178 327 97 12 chr15 23415050 23415651 -80079323 - Lx8 LINE L1 -5 7468 6817 6 763 530 317 93 4 chr15 23415800 23416047 -80078927 + Lx6 LINE L1 5997 6265 -1195 6 763 369 0 0 0 chr15 23416059 23416100 -80078874 + (TTATA)n Simple_repeat Simple_repeat 5 45 0 6 763 2607 286 44 54 chr15 23416106 23417055 -80077919 + Lx6 LINE L1 6505 7444 -16 6 763 393 370 69 6 chr15 23417065 23417239 -80077735 + MLT1A0 LTR MaLR 88 272 -93 6 763 310 298 253 24 chr15 23417380 23417672 -80077302 - L1MC LINE L1 -1705 4441 4083 6 763 452 288 102 51 chr15 23417938 23418212 -80076762 - L1M2 LINE L1 -1704 4439 4152 6 763 3253 175 66 39 chr15 23418525 23419220 -80075754 - RMER6D LTR ERVK -4 716 3 6 763 1372 182 39 61 chr15 23419222 23419532 -80075442 - RMER6-int LTR ERVK 0 3177 2875 6 763 412 220 0 60 chr15 23420807 23420876 -80074098 + MYSERV6-int LTR ERVK 2164 2232 -945 6 763 2360 127 38 8 chr15 23420876 23421273 -80073701 - RLTR9E LTR ERVK 0 409 1 6 763 412 220 0 60 chr15 23421273 23421319 -80073655 + MYSERV6-int LTR ERVK 2233 2272 -905 6 763 921 240 0 12 chr15 23421329 23421578 -80073396 + MYSERV6-int LTR ERVK 2606 2851 -6108 6 763 1309 149 0 0 chr15 23421578 23421786 -80073188 - Lx2 LINE L1 -127 5756 5549 6 763 7066 149 37 12 chr15 23421786 23422995 -80071979 + Lx2 LINE L1 5756 6995 -2 6 763 1136 56 14 0 chr15 23423133 23423276 -80071698 - B1_Mm SINE Alu -2 145 1 6 763 6182 151 23 17 chr15 23423360 23423815 -80071159 + Lx5 LINE L1 5513 5973 -1077 6 763 1153 75 0 0 chr15 23423815 23423961 -80071013 + B1_Mus2 SINE Alu 2 147 0 6 763 6182 191 72 52 chr15 23423961 23425007 -80069967 + Lx5 LINE L1 5974 7049 -1 6 763 373 208 63 0 chr15 23425023 23425182 -80069792 - Lx LINE L1 -18 7626 7458 6 763 209 180 20 0 chr15 23425216 23425266 -80069708 + (CATA)n Simple_repeat Simple_repeat 4 54 0 6 763 1204 240 53 11 chr15 23425267 23425625 -80069349 - Lx9 LINE L1 -128 7516 7144 6 763 236 0 0 81 chr15 23425627 23425664 -80069310 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 6 763 1172 57 0 0 chr15 23425666 23425807 -80069167 - B1_Mus1 SINE Alu -6 142 2 6 763 3786 158 72 20 chr15 23425828 23426527 -80068447 - Lx LINE L1 0 6654 5920 6 763 2143 77 27 0 chr15 23426531 23426829 -80068145 + L1_Mus4 LINE L1 5606 5911 -725 6 763 1625 209 136 59 chr15 23427109 23427750 -80067224 + RMER6C LTR ERVK 1 690 0 6 763 691 285 60 77 chr15 23427845 23428259 -80066715 - RLTR19 LTR ERVK -2 497 91 6 763 395 304 22 0 chr15 23428638 23428776 -80066198 - MMERGLN-int LTR ERV1 -325 7231 7091 6 763 17192 151 26 17 chr15 23429777 23431502 -80063472 + L1_Mur2 LINE L1 1987 3702 -2175 6 763 335 31 45 30 chr15 23431502 23431568 -80063406 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 6 763 17192 151 26 17 chr15 23431568 23433101 -80061873 + L1_Mur2 LINE L1 3703 5274 -603 6 763 479 295 134 29 chr15 23433179 23433455 -80061519 - Lx8 LINE L1 -9 7464 7160 6 763 251 330 54 0 chr15 23433766 23433878 -80061096 - Charlie13a DNA Charlie -874 640 523 6 763 1933 75 0 4 chr15 23434440 23434706 -80060268 - L1Md_F2 LINE L1 0 6582 6318 6 763 3406 137 53 10 chr15 23434706 23435298 -80059676 - Lx3_Mus LINE L1 -483 6526 5908 6 763 5655 97 34 10 chr15 23435301 23436184 -80058790 + Lx3A LINE L1 5028 5926 -1055 6 763 795 285 60 21 chr15 23436182 23436465 -80058509 - Lx6 LINE L1 -2 7458 7165 6 763 476 268 72 12 chr15 23436465 23436664 -80058310 - ORR1D1 LTR MaLR -164 214 1 6 763 23 0 0 0 chr15 23437414 23437437 -80057537 + AT_rich Low_complexity Low_complexity 1 23 0 6 763 24 0 0 0 chr15 23438049 23438073 -80056901 + AT_rich Low_complexity Low_complexity 1 24 0 6 763 3250 125 24 4 chr15 23438086 23438593 -80056381 - Lx3A LINE L1 -2 6979 6463 6 763 198 0 0 0 chr15 23438784 23438806 -80056168 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 763 492 18 0 0 chr15 23438811 23438868 -80056106 + (TA)n Simple_repeat Simple_repeat 2 58 0 6 763 399 389 12 30 chr15 23439793 23439960 -80055014 + RSINE1 SINE B4 2 165 0 6 763 252 154 0 0 chr15 23440473 23440525 -80054449 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 763 22 35 0 0 chr15 23442549 23442578 -80052396 + AT_rich Low_complexity Low_complexity 1 29 0 6 763 351 44 0 0 chr15 23443069 23443114 -80051860 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 763 207 0 0 0 chr15 23443114 23443136 -80051838 + (TA)n Simple_repeat Simple_repeat 1 23 0 6 763 761 30 10 0 chr15 23443136 23443235 -80051739 + (GA)n Simple_repeat Simple_repeat 2 102 0 6 763 333 0 0 0 chr15 23443312 23443349 -80051625 + (T)n Simple_repeat Simple_repeat 1 37 0 6 763 574 345 57 26 chr15 23444841 23445106 -80049868 + B4A SINE B4 11 283 -9 6 763 396 0 0 0 chr15 23445147 23445191 -80049783 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 763 4566 118 21 7 chr15 23445283 23445985 -80048989 - Lx LINE L1 -2 6652 5941 6 763 342 305 57 57 chr15 23447403 23447615 -80047359 + MLT1B LTR MaLR 31 242 -148 6 763 260 279 68 23 chr15 23447899 23447987 -80046987 + L2a LINE L2 3333 3424 -2 6 763 428 363 34 15 chr15 23447985 23448189 -80046785 - L4 LINE RTE -789 1240 1033 6 763 29 0 0 0 chr15 23448943 23448972 -80046002 + AT_rich Low_complexity Low_complexity 1 29 0 6 763 333 0 0 0 chr15 23449269 23449306 -80045668 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 763 284 78 0 38 chr15 23449306 23449358 -80045616 + (CAGAGA)n Simple_repeat Simple_repeat 4 54 0 6 763 418 268 127 6 chr15 23449697 23449855 -80045119 + Lx4B LINE L1 6874 7050 -8 6 763 275 253 56 33 chr15 23450314 23450404 -80044570 + MTD LTR MaLR 308 399 -20 6 763 21 57 0 0 chr15 23450562 23450597 -80044377 + AT_rich Low_complexity Low_complexity 1 35 0 6 763 332 311 92 21 chr15 23450624 23450767 -80044207 + Lx8 LINE L1 6249 6506 -1138 6 763 24 77 0 0 chr15 23450771 23450823 -80044151 + AT_rich Low_complexity Low_complexity 1 52 0 6 763 25 31 0 0 chr15 23451853 23451885 -80043089 + AT_rich Low_complexity Low_complexity 1 32 0 6 763 2436 103 3 70 chr15 23451886 23452271 -80042703 + RLTR10D LTR ERVK 1 359 0 6 763 721 213 0 0 chr15 23452309 23452459 -80042515 + IAP-d-int LTR ERVK 347 496 -6046 6 763 4181 65 57 0 chr15 23452465 23453426 -80041548 + IAP-d-int LTR ERVK 5006 6021 -521 6 763 3439 60 0 0 chr15 23453429 23453844 -80041130 + IAP-d-int LTR ERVK 6128 6542 0 6 763 2408 112 3 68 chr15 23453844 23454228 -80040746 + RLTR10D LTR ERVK 1 359 0 6 763 399 278 1 1 chr15 23454645 23454767 -80040207 + L1_Rod LINE L1 3864 3985 -1895 6 763 6641 99 25 25 chr15 23454831 23455814 -80039160 - RLTR13C1 LTR ERVK 0 983 1 6 763 186 43 0 0 chr15 23455838 23455861 -80039113 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 763 2204 213 76 16 chr15 23456129 23456645 -80038329 - Lx4B LINE L1 -471 6587 6041 6 763 23 0 0 0 chr15 23458104 23458127 -80036847 + AT_rich Low_complexity Low_complexity 1 23 0 6 763 546 16 0 0 chr15 23458181 23458244 -80036730 + (TA)n Simple_repeat Simple_repeat 2 64 0 6 763 28 48 0 0 chr15 23459339 23459381 -80035593 + AT_rich Low_complexity Low_complexity 1 42 0 6 763 1360 316 35 6 chr15 23459421 23459912 -80035062 - Lx8 LINE L1 -728 6745 6241 6 763 291 302 40 40 chr15 23459948 23460072 -80034902 - Lx4B LINE L1 -47 7011 6888 6 763 967 114 95 6 chr15 23460074 23460242 -80034732 + L1_Mur2 LINE L1 4460 4642 -1235 6 763 1063 105 0 0 chr15 23460243 23460386 -80034588 + B1_Mus1 SINE Alu 2 144 -4 6 763 326 85 0 17 chr15 23460398 23460458 -80034516 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 6 763 308 171 78 13 chr15 23460494 23460571 -80034403 + L1_Mur2 LINE L1 4700 4781 -1096 6 763 237 389 33 65 chr15 23460667 23461003 -80033971 - MLT1B LTR MaLR -17 373 49 6 763 2379 114 0 3 chr15 23461124 23461467 -80033507 + Lx LINE L1 6192 6533 -121 6 763 488 140 39 29 chr15 23461631 23461734 -80033240 + Lx LINE L1 6551 6654 0 6 764 24 77 0 0 chr15 23462760 23462812 -80032162 + AT_rich Low_complexity Low_complexity 1 52 0 7 764 3456 158 31 10 chr15 23463167 23463774 -80031200 + L1_Mur2 LINE L1 5082 5701 -176 7 764 6410 176 33 4 chr15 23463772 23464907 -80030067 + Lx4A LINE L1 5864 7030 -28 7 764 467 60 0 15 chr15 23464907 23464975 -80029999 + (TA)n Simple_repeat Simple_repeat 2 68 0 7 764 252 319 102 27 chr15 23464975 23464994 -80029980 + Lx3C LINE L1 6955 6974 -2 7 764 317 115 58 0 chr15 23466108 23466160 -80028814 + Lx9 LINE L1 7413 7467 -177 7 764 2992 162 5 63 chr15 23466166 23466757 -80028217 + RLTR31B_Mm LTR ERVK 1 557 0 7 764 447 19 0 0 chr15 23466757 23466809 -80028165 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 764 455 223 66 26 chr15 23466811 23466963 -80028011 + Lx9 LINE L1 7483 7640 -4 7 764 25 31 0 0 chr15 23466988 23467020 -80027954 + AT_rich Low_complexity Low_complexity 1 32 0 7 764 249 274 81 35 chr15 23467452 23467539 -80027435 - LTR84a LTR ERVL -648 109 19 7 764 25 0 0 0 chr15 23467739 23467764 -80027210 + AT_rich Low_complexity Low_complexity 1 25 0 7 764 5543 43 24 0 chr15 23468289 23468968 -80026006 - L1Md_T LINE L1 -12 6570 5876 7 764 222 91 0 0 chr15 23469044 23469077 -80025897 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 7 764 4205 34 0 0 chr15 23469988 23470484 -80024490 + L1Md_T LINE L1 6086 6581 -1 7 764 1931 262 127 9 chr15 23470625 23471450 -80023524 - Lx7 LINE L1 -352 7108 6119 7 764 279 54 0 0 chr15 23471558 23471595 -80023379 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 764 565 388 31 23 chr15 23471626 23471882 -80023092 - B4A SINE B4 -28 264 7 7 764 230 357 104 15 chr15 23472534 23472736 -80022238 - Lx9 LINE L1 -324 7320 7101 7 764 402 21 0 0 chr15 23472759 23472806 -80022168 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 764 203 188 21 0 chr15 23472831 23472879 -80022095 + (TA)n Simple_repeat Simple_repeat 2 50 0 7 764 481 364 54 14 chr15 23472914 23473193 -80021781 - Lx9 LINE L1 -740 6904 6615 7 764 1193 294 118 93 chr15 23473232 23473928 -80021046 + L1_Rod LINE L1 4180 4824 -1023 7 764 3512 56 0 7 chr15 23473928 23474375 -80020599 + L1Md_F2 LINE L1 6137 6580 -2 7 764 1193 294 118 93 chr15 23474375 23474720 -80020254 + L1_Rod LINE L1 4825 5211 -636 7 764 342 0 0 0 chr15 23474720 23474758 -80020216 + (TA)n Simple_repeat Simple_repeat 2 39 0 7 764 1193 294 118 93 chr15 23474758 23475031 -80019943 + L1_Rod LINE L1 5212 5528 -319 7 764 843 39 0 0 chr15 23477529 23477632 -80017342 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 7 764 880 95 7 26 chr15 23477632 23477783 -80017191 - Lx LINE L1 -13 6641 6494 7 764 8511 70 3 6 chr15 23479003 23480817 -80014157 - L1Md_F2 LINE L1 -5 6577 4771 7 764 2838 152 61 4 chr15 23480818 23481295 -80013679 + L1Md_F LINE L1 274 777 -5742 7 764 192 40 0 0 chr15 23481397 23481422 -80013552 + (TTTTTG)n Simple_repeat Simple_repeat 4 28 0 7 764 251 85 0 21 chr15 23481805 23481853 -80013121 + (CAAA)n Simple_repeat Simple_repeat 4 50 0 7 764 383 325 92 92 chr15 23481912 23482085 -80012889 - B3 SINE B2 -22 173 1 7 764 205 265 0 0 chr15 23483686 23483735 -80011239 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 7 764 827 298 125 34 chr15 23484503 23484854 -80010120 - ORR1C2 LTR MaLR 0 384 2 7 764 1054 106 32 0 chr15 23485495 23485683 -80009291 - L1_Mus4 LINE L1 -6 6630 6437 7 764 547 264 16 0 chr15 23485942 23486067 -80008907 - Lx8 LINE L1 -187 7286 7160 7 764 495 0 0 0 chr15 23486075 23486130 -80008844 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 7 764 264 264 75 32 chr15 23486184 23486278 -80008696 - Lx6 LINE L1 -462 6998 6901 7 764 1273 268 6 59 chr15 23486774 23487111 -80007863 + ORR1C1 LTR MaLR 1 319 -59 7 764 1426 140 35 11 chr15 23487111 23487371 -80007603 - L1_Mur2 LINE L1 -572 5305 5040 7 764 189 196 0 0 chr15 23487661 23487717 -80007257 + GA-rich Low_complexity Low_complexity 2 57 0 7 764 372 229 84 8 chr15 23488214 23488333 -80006641 + HAL1-3A_ME LINE L1 1900 2027 -831 7 764 649 190 6 6 chr15 23488333 23488508 -80006466 + (CA)n Simple_repeat Simple_repeat 1 175 0 7 764 243 344 113 88 chr15 23490461 23490745 -80004229 - B4 SINE B4 0 292 2 7 764 552 234 0 0 chr15 23490822 23490963 -80004011 + (TA)n Simple_repeat Simple_repeat 1 141 0 7 764 22 0 0 0 chr15 23491661 23491683 -80003291 + AT_rich Low_complexity Low_complexity 1 22 0 7 764 225 317 95 40 chr15 23492739 23492887 -80002087 - MLT1J-int LTR MaLR -391 996 841 7 764 26 30 0 0 chr15 23492980 23493013 -80001961 + AT_rich Low_complexity Low_complexity 1 33 0 7 764 271 372 42 42 chr15 23493995 23494310 -80000664 + MLT1B LTR MaLR 19 362 -28 7 764 665 322 91 38 chr15 23494526 23494943 -80000031 - Lx9 LINE L1 -503 7141 6703 7 764 1618 141 4 8 chr15 23495045 23495310 -79999664 + Lx LINE L1 6385 6648 -6 7 764 425 333 19 19 chr15 23495384 23495546 -79999428 + (TCTCTG)n Simple_repeat Simple_repeat 5 166 0 7 764 381 248 21 0 chr15 23495506 23495651 -79999323 + (TA)n Simple_repeat Simple_repeat 1 148 0 7 764 945 62 0 0 chr15 23495834 23495963 -79999011 + (GGA)n Simple_repeat Simple_repeat 3 131 0 7 764 25 0 0 0 chr15 23497074 23497099 -79997875 + AT_rich Low_complexity Low_complexity 1 25 0 7 764 533 197 17 25 chr15 23497646 23497766 -79997208 - RLTR25B LTR ERVK -645 383 265 7 764 385 114 29 0 chr15 23497827 23497897 -79997077 + RLTR25B LTR ERVK 295 366 -662 7 764 3202 62 0 0 chr15 23497898 23498304 -79996670 + L1_Mus1 LINE L1 5902 6307 -260 7 764 670 307 56 50 chr15 23498304 23498661 -79996313 - RLTR10D LTR ERVK 0 359 1 7 764 1522 211 20 28 chr15 23498661 23499017 -79995957 - IAP-d-int LTR ERVK 0 6542 6190 7 764 2652 255 10 7 chr15 23499012 23499692 -79995282 - IAP-d-int LTR ERVK -459 6083 5402 7 764 713 258 29 21 chr15 23499740 23499978 -79994996 - IAP-d-int LTR ERVK -1148 5394 5155 7 764 2780 278 8 5 chr15 23500046 23500816 -79994158 - IAP-d-int LTR ERVK -1457 5085 4314 1 764 425 266 12 3 chr15 23500869 23501002 -79993972 - RLTR10D LTR ERVK -277 134 1 2 764 2085 61 4 0 chr15 23501002 23501266 -79993708 + L1_Mus1 LINE L1 6302 6566 -1 3 764 1272 188 42 0 chr15 23501402 23501641 -79993333 + RLTR25A LTR ERVK 159 407 -696 4 764 2846 159 61 9 chr15 23501641 23502179 -79992795 - L1_Mm LINE L1 -998 4885 4320 5 764 6735 114 16 50 chr15 23502177 23503675 -79991299 + L1_Mus4 LINE L1 5185 6636 0 6 764 917 248 30 38 chr15 23503677 23503940 -79991034 + RLTR25A LTR ERVK 394 631 -472 4 764 3025 12 0 0 chr15 23503955 23504299 -79990675 + L1Md_T LINE L1 5243 5586 -297 7 764 8045 53 0 0 chr15 23504299 23505294 -79989680 + L1Md_T LINE L1 5587 6581 -1 7 764 1897 157 92 11 chr15 23505308 23505516 -79989458 + RLTR25A LTR ERVK 715 952 -151 4 764 294 50 0 0 chr15 23505516 23505556 -79989418 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 8 764 1897 157 92 11 chr15 23505556 23505707 -79989267 + RLTR25A LTR ERVK 953 1102 -1 4 764 366 304 27 7 chr15 23505887 23506033 -79988941 + Lx9 LINE L1 7349 7497 -147 9 764 374 122 0 26 chr15 23506089 23506165 -79988809 + (CAGAGA)n Simple_repeat Simple_repeat 2 75 0 1 764 859 266 131 27 chr15 23506987 23507246 -79987728 - MTD LTR MaLR -2 417 132 1 764 2572 275 11 7 chr15 23508035 23508742 -79986232 + Lx9 LINE L1 6677 7386 -258 1 764 1939 137 18 65 chr15 23509240 23509624 -79985350 + Lx2 LINE L1 6631 6996 -1 1 764 328 262 74 37 chr15 23510572 23510707 -79984267 + Lx8 LINE L1 7191 7330 -143 1 764 680 235 189 26 chr15 23511051 23511400 -79983574 + Lx9 LINE L1 7239 7644 0 1 764 25 65 0 0 chr15 23511412 23511458 -79983516 + AT_rich Low_complexity Low_complexity 1 46 0 1 764 555 118 0 0 chr15 23512407 23512492 -79982482 + (TCTA)n Simple_repeat Simple_repeat 2 86 0 1 764 2726 35 6 0 chr15 23512492 23512831 -79982143 - ORR1A0 LTR MaLR -5 341 1 1 764 779 346 77 29 chr15 23512870 23513495 -79981479 - Lx8 LINE L1 -199 7274 6620 1 764 433 281 53 0 chr15 23513501 23513615 -79981359 + RSINE1 SINE B4 3 122 -43 2 764 393 316 0 26 chr15 23513900 23514017 -79980957 + B3 SINE B2 2 115 -101 2 764 283 283 10 29 chr15 23514032 23514134 -79980840 + RSINE1 SINE B4 37 136 -29 2 764 26 0 0 0 chr15 23514160 23514186 -79980788 + AT_rich Low_complexity Low_complexity 1 26 0 2 764 476 338 53 24 chr15 23514730 23514976 -79979998 + MLT-int LTR MaLR 1413 1665 -70 2 764 3924 48 0 17 chr15 23515077 23515560 -79979414 + MT2C_Mm LTR ERVL 1 475 0 2 764 269 371 76 7 chr15 23516082 23516226 -79978748 + Kanga1a DNA Tc2 280 433 -321 2 764 239 130 56 0 chr15 23516337 23516391 -79978583 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 2 764 540 0 0 0 chr15 23516722 23516782 -79978192 + (TA)n Simple_repeat Simple_repeat 1 60 0 2 764 243 0 0 0 chr15 23516782 23516808 -79978166 + (GA)n Simple_repeat Simple_repeat 2 28 0 2 764 333 226 0 0 chr15 23517535 23517619 -79977355 + GA-rich Low_complexity Low_complexity 1 84 0 3 764 23 54 0 0 chr15 23518109 23518146 -79976828 + AT_rich Low_complexity Low_complexity 1 37 0 3 764 42 36 0 0 chr15 23519771 23519827 -79975147 + AT_rich Low_complexity Low_complexity 1 56 0 3 764 1147 49 21 0 chr15 23519834 23519977 -79974997 + B1_Mus1 SINE Alu 3 148 0 3 764 2293 166 86 32 chr15 23520028 23520495 -79974479 + RLTR19 LTR ERVK 3 494 -5 3 764 449 185 125 8 chr15 23522090 23522210 -79972764 + Lx5 LINE L1 6917 7050 0 3 764 309 182 49 49 chr15 23522226 23522307 -79972667 - MT2A LTR ERVL -447 86 6 3 764 1262 297 71 35 chr15 23523105 23523643 -79971331 - Lx6 LINE L1 -27 7433 6490 3 764 610 290 5 37 chr15 23523644 23523834 -79971140 + Lx6 LINE L1 6613 6796 -664 3 764 455 309 5 46 chr15 23523857 23524074 -79970900 - B3 SINE B2 -6 210 3 3 764 1690 180 7 22 chr15 23524192 23524579 -79970395 - RLTR31_Mm LTR ERVK 0 561 110 4 764 641 172 0 59 chr15 23524987 23525123 -79969851 - RLTR31_Mm LTR ERVK -433 128 1 4 764 351 0 0 0 chr15 23525219 23525258 -79969716 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 764 1701 195 80 36 chr15 23525558 23525947 -79969027 + MTC LTR MaLR 16 421 0 4 764 25 51 0 0 chr15 23526664 23526703 -79968271 + AT_rich Low_complexity Low_complexity 1 39 0 4 764 28 61 0 0 chr15 23526804 23526853 -79968121 + AT_rich Low_complexity Low_complexity 1 49 0 4 764 192 77 0 0 chr15 23527553 23527579 -79967395 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 764 347 311 36 12 chr15 23527763 23527929 -79967045 + L1MB8 LINE L1 6007 6176 -2 4 764 25 51 0 0 chr15 23529587 23529626 -79965348 + AT_rich Low_complexity Low_complexity 1 39 0 4 764 538 39 13 13 chr15 23529634 23529712 -79965262 + (CA)n Simple_repeat Simple_repeat 2 79 0 4 764 423 0 0 0 chr15 23530316 23530363 -79964611 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 764 2546 129 52 27 chr15 23530800 23531076 -79963898 - Lx LINE L1 -1 6653 6369 5 764 2461 137 8 8 chr15 23531076 23531472 -79963502 - MTA_Mm LTR MaLR 0 396 1 5 764 2546 129 52 27 chr15 23531472 23531633 -79963341 - Lx LINE L1 -286 6368 6205 5 764 279 0 0 0 chr15 23532905 23532936 -79962038 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 5 764 1091 120 0 0 chr15 23532941 23533099 -79961875 - B2_Mm2 SINE B2 -36 159 2 5 764 213 39 0 0 chr15 23533182 23533208 -79961766 + (T)n Simple_repeat Simple_repeat 1 26 0 5 764 805 308 38 24 chr15 23533301 23533594 -79961380 + MLT1B LTR MaLR 54 350 -40 5 764 305 342 128 51 chr15 23533868 23534164 -79960810 + MLT1A0 LTR MaLR 43 361 -4 5 764 519 396 26 19 chr15 23534422 23534687 -79960287 + B4A SINE B4 2 268 -24 5 764 7694 65 5 1 chr15 23535103 23536121 -79958853 - L1_Mus1 LINE L1 -1 6566 5545 5 764 289 319 10 21 chr15 23536416 23536512 -79958462 - B3A SINE B2 -63 135 41 5 764 496 99 22 0 chr15 23536627 23536718 -79958256 - Lx2 LINE L1 -1 6996 6904 6 764 215 367 0 20 chr15 23536772 23536872 -79958102 + (TATATG)n Simple_repeat Simple_repeat 3 100 0 6 764 524 287 28 52 chr15 23538505 23538718 -79956256 + B3 SINE B2 1 208 -8 6 764 2781 127 13 34 chr15 23538791 23539264 -79955710 - Lx2 LINE L1 0 6997 6535 6 764 28 0 0 0 chr15 23540386 23540414 -79954560 + AT_rich Low_complexity Low_complexity 1 28 0 6 764 270 0 0 0 chr15 23544316 23544346 -79950628 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 6 764 648 188 0 0 chr15 23544479 23544607 -79950367 + (TA)n Simple_repeat Simple_repeat 2 129 0 6 764 503 246 7 22 chr15 23545072 23545209 -79949765 - Lx7 LINE L1 -3 7693 7559 6 764 855 203 0 0 chr15 23545202 23545355 -79949619 - L1_Mur3 LINE L1 -372 5508 5356 6 764 716 57 9 0 chr15 23545518 23545624 -79949350 + (CA)n Simple_repeat Simple_repeat 2 108 0 6 764 351 0 0 0 chr15 23545624 23545662 -79949312 + (GA)n Simple_repeat Simple_repeat 2 40 0 7 764 980 119 7 0 chr15 23545813 23545956 -79949018 + B1_Mus1 SINE Alu 5 148 0 7 764 183 96 0 55 chr15 23545966 23546021 -79948953 + A-rich Low_complexity Low_complexity 1 52 0 7 764 1033 141 37 26 chr15 23548445 23548634 -79946340 + B2_Mm2 SINE B2 1 191 -4 7 764 205 177 32 16 chr15 23548662 23548725 -79946249 + (TTAA)n Simple_repeat Simple_repeat 3 66 0 7 764 38 68 0 0 chr15 23549040 23549113 -79945861 + AT_rich Low_complexity Low_complexity 1 73 0 7 764 399 56 0 0 chr15 23549745 23549799 -79945175 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 764 23 0 0 0 chr15 23549804 23549827 -79945147 + AT_rich Low_complexity Low_complexity 1 23 0 7 764 30 77 0 0 chr15 23551360 23551425 -79943549 + AT_rich Low_complexity Low_complexity 1 65 0 7 764 2365 83 125 16 chr15 23551992 23552359 -79942615 - MTB_Mm LTR MaLR 0 407 1 7 764 207 0 0 0 chr15 23552362 23552385 -79942589 + (TG)n Simple_repeat Simple_repeat 2 24 0 8 764 2351 255 39 41 chr15 23552433 23553068 -79941906 - Lx9 LINE L1 -658 6986 6349 8 764 3496 44 7 2 chr15 23553068 23553505 -79941469 - L1Md_F3 LINE L1 -1 6583 6145 8 764 2351 255 39 41 chr15 23553505 23553569 -79941405 - Lx9 LINE L1 -1296 6348 6289 8 764 21 0 0 0 chr15 23554126 23554147 -79940827 + AT_rich Low_complexity Low_complexity 1 21 0 8 764 399 21 0 0 chr15 23554168 23554216 -79940758 + (TG)n Simple_repeat Simple_repeat 1 48 0 8 764 276 390 24 24 chr15 23554259 23554385 -79940589 - RSINE1 SINE B4 -31 134 9 8 764 984 329 97 41 chr15 23554418 23555027 -79939947 - Lx9 LINE L1 -709 6935 6293 8 764 393 339 92 39 chr15 23555174 23555742 -79939232 + Lx9 LINE L1 6993 7590 -54 8 764 242 308 0 0 chr15 23556110 23556188 -79938786 + MLT2C2 LTR ERVL 1 78 -386 8 764 354 86 0 0 chr15 23556350 23556403 -79938571 - B1_Mus2 SINE Alu -11 136 57 8 764 432 37 0 0 chr15 23556507 23556561 -79938413 + (TC)n Simple_repeat Simple_repeat 2 55 0 9 764 214 345 36 0 chr15 23557731 23557815 -79937159 - L2a LINE L2 -2 3424 3338 9 764 272 362 103 12 chr15 23559082 23559247 -79935727 - MTEb LTR MaLR -194 185 6 9 764 4483 121 14 24 chr15 23559264 23559978 -79934996 - Lx3B LINE L1 0 5886 5180 9 764 2519 151 179 3 chr15 23559967 23560827 -79934147 + Lx3B LINE L1 5959 6969 -4 9 764 351 0 0 0 chr15 23560833 23560872 -79934102 + (TAA)n Simple_repeat Simple_repeat 2 40 0 9 764 309 109 0 0 chr15 23560935 23560981 -79933993 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 764 497 328 133 21 chr15 23560999 23561329 -79933645 - Lx9 LINE L1 -175 7469 7103 9 764 324 0 0 0 chr15 23561569 23561605 -79933369 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 9 764 1157 75 0 0 chr15 23562507 23562653 -79932321 + B1_Mus1 SINE Alu 3 148 0 9 764 396 209 0 0 chr15 23563059 23563145 -79931829 + (TA)n Simple_repeat Simple_repeat 2 87 0 9 764 1038 93 14 0 chr15 23563664 23563803 -79931171 + B1_Mm SINE Alu 1 141 -6 1 764 840 107 33 7 chr15 23563824 23563974 -79931000 + (GGAGAA)n Simple_repeat Simple_repeat 3 156 0 1 764 665 158 223 6 chr15 23565123 23565289 -79929685 - RMER6C LTR ERVK -4 686 485 1 764 3734 74 0 4 chr15 23565289 23565776 -79929198 - L1Md_F2 LINE L1 -108 6474 5990 1 764 1218 186 204 78 chr15 23565783 23566179 -79928795 - RMER6C LTR ERVK -244 446 1 1 764 492 48 0 0 chr15 23566635 23566698 -79928276 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 764 1528 196 51 43 chr15 23566749 23567100 -79927874 + ORR1B1 LTR MaLR 41 394 0 1 764 791 129 14 0 chr15 23567107 23567246 -79927728 + ORR1B1-int LTR MaLR 8 148 -1815 1 764 4380 130 16 6 chr15 23567253 23567940 -79927034 + MERVL-int LTR ERVL 2361 3054 -2431 1 764 592 175 12 122 chr15 23567940 23568115 -79926859 - ORR1A3 LTR MaLR -181 186 1 1 764 22 0 0 0 chr15 23568481 23568503 -79926471 + AT_rich Low_complexity Low_complexity 1 22 0 1 764 608 319 88 27 chr15 23568537 23568981 -79925993 + Arthur1 DNA Tip100 2723 3193 -754 1 764 39 0 0 0 chr15 23569314 23569353 -79925621 + AT_rich Low_complexity Low_complexity 1 39 0 1 764 27 73 0 0 chr15 23569534 23569589 -79925385 + AT_rich Low_complexity Low_complexity 1 55 0 1 764 329 310 27 8 chr15 23570019 23570173 -79924801 - L1_Mus3 LINE L1 -368 5816 5663 1 764 976 254 92 26 chr15 23570461 23570687 -79924287 - ORR1D2 LTR MaLR 0 370 143 1 764 495 0 0 0 chr15 23570687 23570742 -79924232 + (TTA)n Simple_repeat Simple_repeat 2 56 0 1 764 976 254 92 26 chr15 23570742 23570862 -79924112 - ORR1D2 LTR MaLR -228 142 1 1 764 241 186 0 0 chr15 23570902 23570945 -79924029 - MTEa LTR MaLR -3 376 334 1 764 442 345 29 6 chr15 23571024 23571196 -79923778 + B3A SINE B2 1 176 -22 1 764 234 143 0 0 chr15 23571200 23571249 -79923725 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 764 462 40 26 39 chr15 23571252 23571330 -79923644 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 1 764 23 0 0 0 chr15 23571826 23571849 -79923125 + AT_rich Low_complexity Low_complexity 1 23 0 1 764 702 306 94 43 chr15 23572106 23572417 -79922557 + Lx9 LINE L1 7154 7478 -166 1 764 291 114 0 0 chr15 23572417 23572461 -79922513 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 764 702 306 94 43 chr15 23572461 23572616 -79922358 + Lx9 LINE L1 7479 7644 0 1 764 2395 57 3 0 chr15 23572846 23573143 -79921831 - L1Md_F2 LINE L1 -342 6240 5943 1 764 998 38 0 0 chr15 23573143 23573275 -79921699 + L1Md_T LINE L1 6451 6582 0 1 764 189 0 0 0 chr15 23573291 23573312 -79921662 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 764 182 62 31 0 chr15 23573846 23573878 -79921096 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 764 238 311 54 22 chr15 23574326 23574418 -79920556 + Charlie2b DNA MER1_type 764 858 -1924 1 764 299 195 7 113 chr15 23575469 23575504 -79919470 + Lx9 LINE L1 7384 7418 -226 1 764 225 65 0 0 chr15 23575504 23575535 -79919439 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 764 299 195 7 113 chr15 23575535 23575649 -79919325 + Lx9 LINE L1 7419 7516 -128 1 764 242 160 0 20 chr15 23575651 23575702 -79919272 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 764 676 150 13 13 chr15 23575702 23575857 -79919117 + GA-rich Low_complexity Low_complexity 1 155 0 1 764 38 39 0 0 chr15 23575896 23575948 -79919026 + AT_rich Low_complexity Low_complexity 1 52 0 1 764 516 311 19 0 chr15 23576171 23576332 -79918642 - U1 snRNA snRNA -1 164 1 1 764 220 297 18 18 chr15 23576572 23576685 -79918289 + (TCTCTG)n Simple_repeat Simple_repeat 4 116 0 1 764 336 232 0 0 chr15 23576686 23576785 -79918189 + (TG)n Simple_repeat Simple_repeat 2 100 0 1 764 7389 92 3 0 chr15 23577886 23579148 -79915826 - L1_Mus1 LINE L1 0 6567 5303 1 764 6627 121 8 27 chr15 23579143 23580207 -79914767 + L1_Mus1 LINE L1 4280 5323 -560 1 764 4540 186 77 7 chr15 23580240 23580893 -79914081 + L1_Mur2 LINE L1 390 1040 -6046 1 764 1266 42 0 0 chr15 23580893 23581058 -79913916 + (CA)n Simple_repeat Simple_repeat 2 166 0 1 764 16645 147 33 51 chr15 23581058 23584326 -79910648 + L1_Mur2 LINE L1 1041 4305 -1572 1 764 468 0 0 0 chr15 23584326 23584378 -79910596 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 764 16645 146 32 52 chr15 23584378 23584553 -79910421 + L1_Mur2 LINE L1 4306 4482 -1395 1 764 678 229 60 24 chr15 23584577 23584879 -79910095 + Lx4A LINE L1 5849 6140 -910 1 764 621 0 0 0 chr15 23584879 23584948 -79910026 + (GGAA)n Simple_repeat Simple_repeat 1 69 0 1 764 827 368 62 15 chr15 23585156 23585769 -79909205 - Lx8 LINE L1 -449 7024 6383 1 764 1995 102 56 0 chr15 23586232 23586537 -79908437 + ORR1A2 LTR MaLR 1 322 -5 1 764 970 123 111 0 chr15 23586880 23587051 -79907923 + B2_Mm1t SINE B2 2 191 -2 1 764 360 380 46 17 chr15 23589961 23590135 -79904839 + B3A SINE B2 2 180 -18 1 764 21 0 0 0 chr15 23592134 23592155 -79902819 + AT_rich Low_complexity Low_complexity 1 21 0 1 764 22 0 0 0 chr15 23592469 23592491 -79902483 + AT_rich Low_complexity Low_complexity 1 22 0 1 765 21 36 0 0 chr15 23593757 23593785 -79901189 + AT_rich Low_complexity Low_complexity 1 28 0 1 765 977 330 25 59 chr15 23594076 23594718 -79900256 - Lx9 LINE L1 -174 7470 6851 1 765 23 68 0 0 chr15 23594751 23594795 -79900179 + AT_rich Low_complexity Low_complexity 1 44 0 1 765 183 162 0 0 chr15 23595300 23595337 -79899637 + GA-rich Low_complexity Low_complexity 1 37 0 1 765 1800 298 16 11 chr15 23596416 23596973 -79898001 + Lx6 LINE L1 6197 6756 -704 1 765 270 0 0 0 chr15 23596981 23597011 -79897963 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 1 765 227 246 16 0 chr15 23597162 23597223 -79897751 + Lx6 LINE L1 7390 7451 -9 1 765 882 150 0 22 chr15 23598068 23598252 -79896722 + CT-rich Low_complexity Low_complexity 1 180 0 1 765 6309 55 1 2 chr15 23598856 23599648 -79895326 + L1_Mm LINE L1 4795 5586 -297 1 765 8209 31 3 1 chr15 23599648 23600627 -79894347 + L1Md_F3 LINE L1 5588 6568 -16 1 765 644 108 0 40 chr15 23600697 23600822 -79894152 + L1Md_F2 LINE L1 6463 6582 0 1 765 396 0 0 0 chr15 23601024 23601068 -79893906 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 765 1075 243 303 53 chr15 23601069 23601438 -79893536 - MT2B LTR ERVL -59 542 85 1 765 705 45 0 0 chr15 23601438 23601527 -79893447 + (CATA)n Simple_repeat Simple_repeat 2 90 0 1 765 278 272 74 0 chr15 23601527 23601608 -79893366 - MT2B LTR ERVL -514 87 1 1 765 355 328 3 26 chr15 23601717 23601858 -79893116 + MTC LTR MaLR 240 402 -19 1 765 1329 294 45 33 chr15 23601929 23602418 -79892556 + RMER5 LTR ERV1 40 534 0 1 765 266 373 26 7 chr15 23603572 23603723 -79891251 + Charlie1a DNA MER1_type 399 552 -903 1 765 235 338 46 7 chr15 23603743 23603891 -79891083 + Charlie1a DNA MER1_type 615 768 -687 1 765 798 205 9 18 chr15 23603891 23604080 -79890894 - ORR1C2 LTR MaLR 0 384 161 1 765 222 37 0 0 chr15 23604106 23604133 -79890841 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 765 495 0 0 0 chr15 23604133 23604187 -79890787 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 765 255 287 0 9 chr15 23604188 23604304 -79890670 + (CATATA)n Simple_repeat Simple_repeat 6 120 0 1 765 2369 310 92 19 chr15 23604304 23605295 -79889679 - ORR1C2-int LTR MaLR -307 1063 1 1 765 911 174 112 49 chr15 23605295 23605518 -79889456 - ORR1C2 LTR MaLR 0 384 148 1 765 192 152 0 0 chr15 23605653 23605686 -79889288 + (ATG)n Simple_repeat Simple_repeat 1 33 0 1 765 818 96 16 0 chr15 23605762 23605887 -79889087 + (GAAA)n Simple_repeat Simple_repeat 4 130 0 1 765 258 116 0 0 chr15 23605920 23605963 -79889011 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 1 765 369 0 0 0 chr15 23606031 23606072 -79888902 + (ATG)n Simple_repeat Simple_repeat 2 42 0 1 765 516 343 70 65 chr15 23606123 23606478 -79888496 + ORR1E LTR MaLR 1 357 -2 1 765 423 0 0 0 chr15 23606606 23606653 -79888321 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 765 396 0 0 0 chr15 23606653 23606696 -79888278 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 765 237 132 0 0 chr15 23606987 23607025 -79887949 + (CATA)n Simple_repeat Simple_repeat 4 41 0 1 765 587 49 39 10 chr15 23608372 23608476 -79886498 + (TCTA)n Simple_repeat Simple_repeat 2 108 0 1 765 497 226 0 6 chr15 23609476 23609654 -79885320 + (CA)n Simple_repeat Simple_repeat 2 178 0 1 765 497 313 0 11 chr15 23609697 23609878 -79885096 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 765 443 326 24 20 chr15 23610195 23610445 -79884529 - Lx7 LINE L1 -1 7695 7445 1 765 630 0 0 0 chr15 23610445 23610515 -79884459 + (GGA)n Simple_repeat Simple_repeat 3 72 0 1 765 344 264 30 125 chr15 23610515 23610641 -79884333 - Lx7 LINE L1 -192 7504 7390 1 765 495 0 0 0 chr15 23610641 23610696 -79884278 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 765 344 264 30 125 chr15 23610696 23610833 -79884141 - Lx7 LINE L1 -307 7389 7266 1 765 490 309 95 48 chr15 23610837 23611251 -79883723 + Lx5 LINE L1 6611 7033 -17 1 765 22 0 0 0 chr15 23611256 23611278 -79883696 + AT_rich Low_complexity Low_complexity 1 22 0 1 765 955 233 334 19 chr15 23611286 23611705 -79883269 - Lx7 LINE L1 -453 7243 6693 1 765 374 72 48 12 chr15 23611895 23611979 -79882995 + (CAAA)n Simple_repeat Simple_repeat 2 88 0 1 765 4252 199 73 29 chr15 23612038 23612531 -79882443 - Lx5 LINE L1 -979 6071 5552 1 765 189 0 0 0 chr15 23612531 23612552 -79882422 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 765 4252 235 71 8 chr15 23612552 23613459 -79881515 - Lx5 LINE L1 -326 5551 4593 1 765 301 307 63 12 chr15 23613639 23613863 -79881111 - L1M3 LINE L1 -637 5543 5314 1 765 490 335 50 45 chr15 23614036 23614236 -79880738 - B3 SINE B2 -8 208 8 1 765 375 60 0 0 chr15 23614244 23614294 -79880680 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 765 605 76 11 0 chr15 23614294 23614386 -79880588 + (TG)n Simple_repeat Simple_repeat 2 94 0 1 765 183 220 0 0 chr15 23614554 23614604 -79880370 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 1 765 509 335 10 55 chr15 23615120 23615322 -79879652 - B3A SINE B2 0 198 6 1 765 985 103 0 13 chr15 23615795 23616031 -79878943 + (TTTC)n Simple_repeat Simple_repeat 1 233 0 1 765 219 174 0 21 chr15 23616069 23616116 -79878858 + (TCTG)n Simple_repeat Simple_repeat 3 48 0 1 765 295 338 77 40 chr15 23616891 23617113 -79877861 - Lx8 LINE L1 -380 7093 6864 1 765 733 264 21 71 chr15 23617115 23617355 -79877619 + ORR1D1 LTR MaLR 3 230 -144 1 765 3071 40 0 0 chr15 23617356 23617767 -79877207 - L1Md_F2 LINE L1 -631 5951 5541 1 765 4792 50 0 0 chr15 23617767 23618383 -79876591 + L1Md_F2 LINE L1 5981 6582 0 1 765 315 0 0 0 chr15 23618419 23618454 -79876520 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 1 765 815 207 17 22 chr15 23618454 23618632 -79876342 + ORR1D1 LTR MaLR 197 373 -1 1 765 601 168 25 0 chr15 23619106 23619225 -79875749 - RMER12 LTR ERVK -543 779 658 1 765 1057 168 104 0 chr15 23619270 23619472 -79875502 - Lx2 LINE L1 0 6997 6775 1 765 1338 121 0 0 chr15 23619467 23619649 -79875325 - Lx2 LINE L1 -349 6648 6467 1 765 315 0 0 0 chr15 23619918 23619953 -79875021 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 765 432 37 0 0 chr15 23620145 23620199 -79874775 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 765 215 229 0 79 chr15 23620487 23620563 -79874411 + CT-rich Low_complexity Low_complexity 1 70 0 2 765 228 191 21 0 chr15 23621021 23621068 -79873906 + (CATA)n Simple_repeat Simple_repeat 2 49 0 2 765 203 136 45 0 chr15 23621069 23621113 -79873861 + GA-rich Low_complexity Low_complexity 1 46 0 2 765 1351 286 75 5 chr15 23621438 23621825 -79873149 + MTD LTR MaLR 6 419 0 2 765 2157 259 69 33 chr15 23621842 23622727 -79872247 + L1_Rod LINE L1 3817 4733 -1114 2 765 356 245 15 10 chr15 23622736 23622838 -79872136 + L1_Rod LINE L1 4828 4956 -1187 2 765 294 299 99 53 chr15 23622967 23623119 -79871855 - MTEb LTR MaLR -219 160 2 2 765 2650 50 3 14 chr15 23623315 23623662 -79871312 - IAPEY_LTR LTR ERVK 0 385 43 2 765 661 313 136 18 chr15 23623766 23624080 -79870894 + MTE2b LTR MaLR 1 356 -23 2 765 2561 59 0 3 chr15 23624080 23624405 -79870569 + L1_Mus1 LINE L1 6244 6567 0 2 765 661 313 136 18 chr15 23624405 23624422 -79870552 + MTE2b LTR MaLR 357 371 -8 2 765 32 0 0 0 chr15 23624620 23624652 -79870322 + AT_rich Low_complexity Low_complexity 1 32 0 2 765 735 42 0 0 chr15 23624655 23624750 -79870224 + (TC)n Simple_repeat Simple_repeat 2 96 0 2 765 469 331 22 11 chr15 23624755 23624935 -79870039 - B3A SINE B2 -16 182 1 2 765 324 261 0 35 chr15 23625856 23625971 -79869003 + (CATATA)n Simple_repeat Simple_repeat 3 113 0 2 765 518 108 0 12 chr15 23626868 23626952 -79868022 + (GGA)n Simple_repeat Simple_repeat 2 84 0 2 765 233 254 0 0 chr15 23626985 23627040 -79867934 + L1M3de LINE L1 1633 1687 -4966 2 765 306 50 0 0 chr15 23628863 23628903 -79866071 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 765 510 17 0 0 chr15 23628958 23629017 -79865957 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 765 609 83 18 49 chr15 23629591 23629755 -79865219 + A-rich Low_complexity Low_complexity 2 160 0 2 765 1010 128 6 0 chr15 23630631 23630787 -79864187 + B2_Mm2 SINE B2 1 157 -38 2 765 4255 46 0 0 chr15 23630863 23631381 -79863593 + L1Md_F2 LINE L1 5069 5586 -297 2 765 7915 52 1 5 chr15 23631381 23632378 -79862596 + L1Md_F2 LINE L1 5587 6579 -3 2 765 225 0 0 0 chr15 23632468 23632493 -79862481 + (A)n Simple_repeat Simple_repeat 1 25 0 2 765 232 211 18 0 chr15 23632532 23632589 -79862385 - MTE2b LTR MaLR 0 379 322 2 765 748 233 58 33 chr15 23632596 23632901 -79862073 - RLTR25A LTR ERVK 0 1028 618 2 765 3658 43 0 0 chr15 23632901 23633344 -79861630 - L1Md_T LINE L1 0 6582 6140 2 765 4750 20 0 0 chr15 23633346 23633970 -79861004 + L1Md_T LINE L1 5521 6144 -438 2 765 1193 167 154 2 chr15 23633978 23634286 -79860688 - RLTR25A LTR ERVK -415 613 188 2 765 270 0 0 0 chr15 23634311 23634345 -79860629 - RMER17D LTR ERVK -855 34 1 2 765 406 226 128 0 chr15 23634427 23634529 -79860445 - MTE2b LTR MaLR -264 115 1 2 765 570 54 0 0 chr15 23634709 23634783 -79860191 + (GA)n Simple_repeat Simple_repeat 2 75 0 2 765 189 0 0 0 chr15 23634916 23634937 -79860037 + (T)n Simple_repeat Simple_repeat 1 21 0 2 765 247 357 55 20 chr15 23635202 23635348 -79859626 + MER5B DNA MER1_type 2 152 -26 2 765 196 98 0 73 chr15 23635586 23635641 -79859333 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 2 765 375 78 0 0 chr15 23636121 23636172 -79858802 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 765 23 33 0 0 chr15 23636364 23636394 -79858580 + AT_rich Low_complexity Low_complexity 1 30 0 2 765 23 40 0 39 chr15 23637999 23638022 -79856952 + AT_rich Low_complexity Low_complexity 1 23 0 2 765 802 193 21 47 chr15 23638022 23638212 -79856762 - B2_Mm2 SINE B2 -10 185 1 2 765 23 40 0 39 chr15 23638212 23638240 -79856734 + AT_rich Low_complexity Low_complexity 1 27 0 2 765 281 310 357 9 chr15 23639223 23639447 -79855527 - MLT1A1 LTR MaLR -16 392 91 2 765 271 214 50 62 chr15 23640089 23640119 -79854855 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 2 765 3212 37 34 0 chr15 23640119 23640501 -79854473 - MTA_Mm LTR MaLR -1 395 1 2 765 7813 78 26 5 chr15 23640501 23641576 -79853398 - MTA_Mm-int LTR MaLR 0 1098 1 2 765 3158 46 5 8 chr15 23641576 23641973 -79853001 - MTA_Mm LTR MaLR 0 396 1 2 765 495 147 46 38 chr15 23641973 23642197 -79852777 + (TCTA)n Simple_repeat Simple_repeat 1 225 0 2 765 248 72 0 67 chr15 23642197 23642257 -79852717 + (CAT)n Simple_repeat Simple_repeat 2 57 0 2 765 271 214 50 62 chr15 23642257 23642295 -79852679 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 2 765 412 355 42 5 chr15 23642354 23642569 -79852405 - ID_B1 SINE B4 0 224 2 2 765 22 0 0 0 chr15 23643837 23643859 -79851115 + AT_rich Low_complexity Low_complexity 1 22 0 2 765 269 53 53 18 chr15 23645212 23645269 -79849705 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 2 765 413 274 36 107 chr15 23646153 23646349 -79848625 + B3A SINE B2 6 187 -8 2 765 3369 43 38 7 chr15 23646768 23647191 -79847783 - RLTR10C LTR ERVK 0 436 1 2 765 1237 207 29 29 chr15 23647914 23648192 -79846782 + ORR1B2 LTR MaLR 2 279 -88 2 765 614 320 6 6 chr15 23648282 23648455 -79846519 - B3 SINE B2 -42 174 2 2 765 222 37 0 0 chr15 23648478 23648505 -79846469 + (CAA)n Simple_repeat Simple_repeat 2 28 0 2 765 23 0 0 0 chr15 23648685 23648708 -79846266 + AT_rich Low_complexity Low_complexity 1 23 0 2 765 21 0 0 0 chr15 23649209 23649230 -79845744 + AT_rich Low_complexity Low_complexity 1 21 0 2 765 305 217 18 70 chr15 23649394 23649508 -79845466 + HAL1-2a_MD LINE L1 2419 2526 -498 2 765 639 275 7 13 chr15 23649525 23649676 -79845298 - B1_Mur4 SINE Alu 0 150 1 2 765 323 212 12 0 chr15 23650518 23650603 -79844371 + (CA)n Simple_repeat Simple_repeat 1 86 0 2 765 468 62 0 0 chr15 23651099 23651163 -79843811 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 765 2475 239 42 11 chr15 23651333 23651884 -79843090 - Lx5 LINE L1 -3 7047 6480 2 765 3449 198 43 3 chr15 23651919 23652694 -79842280 - L1_Mur2 LINE L1 -652 5225 4420 2 765 1868 152 7 155 chr15 23652732 23653177 -79841797 - RLTR21 LTR ERVK -26 1546 1168 2 765 1752 348 41 28 chr15 23653254 23654151 -79840823 - Lx8 LINE L1 -318 7155 6247 2 765 945 120 0 0 chr15 23654992 23655209 -79839765 + (CA)n Simple_repeat Simple_repeat 1 217 0 2 765 1109 289 53 3 chr15 23655619 23655938 -79839036 - ORR1D1 LTR MaLR 0 374 40 2 765 1225 276 58 11 chr15 23655984 23656332 -79838642 - ORR1D1 LTR MaLR -8 366 3 2 765 24 53 0 0 chr15 23657212 23657250 -79837724 + AT_rich Low_complexity Low_complexity 1 38 0 2 765 322 391 0 9 chr15 23657261 23657377 -79837597 + RSINE1 SINE B4 36 150 -15 2 765 251 227 15 15 chr15 23657931 23658061 -79836913 + (TA)n Simple_repeat Simple_repeat 2 131 0 2 765 1032 315 86 13 chr15 23658549 23658932 -79836042 - MTD LTR MaLR -4 415 5 2 765 38309 7 0 7 chr15 23658980 23664394 -79830580 + L1Md_A LINE L1 214 5586 -297 2 765 9046 1 0 0 chr15 23664394 23665390 -79829584 + L1Md_A LINE L1 5587 6582 0 2 765 1606 235 204 24 chr15 23665478 23665774 -79829200 + RMER6C LTR ERVK 2 377 -313 2 765 5745 75 0 3 chr15 23665774 23666525 -79828449 - L1_Mus1 LINE L1 0 6567 5819 2 765 1606 235 204 24 chr15 23666525 23666812 -79828162 + RMER6C LTR ERVK 378 689 -1 2 765 223 281 0 0 chr15 23666986 23667043 -79827931 + GA-rich Low_complexity Low_complexity 1 57 0 2 765 27 62 0 0 chr15 23667302 23667350 -79827624 + AT_rich Low_complexity Low_complexity 1 48 0 2 765 2425 90 26 14 chr15 23667775 23668124 -79826850 + IAPEY2_LTR LTR ERVK 1 353 -4 2 765 6390 144 8 11 chr15 23668127 23669179 -79825795 + IAPEy-int LTR ERVK 10 1058 -6455 2 765 21691 86 2 6 chr15 23669174 23672142 -79822832 + IAPEy-int LTR ERVK 4551 7507 -6 2 765 2262 114 35 3 chr15 23672142 23672485 -79822489 + IAPEY2_LTR LTR ERVK 4 357 0 2 765 1500 319 18 5 chr15 23672485 23672932 -79822042 - Lx5 LINE L1 -130 6920 6468 2 765 2942 182 70 31 chr15 23672937 23673555 -79821419 - RLTR26 LTR ERVK 0 642 1 2 765 254 245 62 31 chr15 23673555 23673652 -79821322 - Lx6 LINE L1 -679 6781 6682 2 765 1463 195 141 11 chr15 23673650 23673753 -79821221 + L1_Mur2 LINE L1 4174 4277 -1600 2 765 342 0 0 0 chr15 23673753 23673791 -79821183 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2 765 1463 195 141 11 chr15 23673791 23674128 -79820846 + L1_Mur2 LINE L1 4278 4670 -1207 2 765 180 0 0 0 chr15 23674138 23674158 -79820816 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2 765 2246 168 65 3 chr15 23674164 23674593 -79820381 + L1MC3 LINE L1 5387 5884 -1901 2 765 315 294 0 0 chr15 23674560 23674652 -79820322 + L1_Mur2 LINE L1 4639 4730 -1150 2 765 5471 209 32 138 chr15 23674665 23675773 -79819201 + L1_Mur1 LINE L1 3943 4967 -919 2 765 429 36 0 0 chr15 23675773 23675828 -79819146 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 765 5471 209 32 138 chr15 23675828 23676587 -79818387 + L1_Mur1 LINE L1 4968 5611 -275 2 765 649 350 35 27 chr15 23676607 23677012 -79817962 - Lx7 LINE L1 -484 7212 6805 2 765 472 323 46 26 chr15 23677234 23677428 -79817546 + Lx8 LINE L1 6958 7155 -318 2 765 1170 249 83 69 chr15 23677484 23677846 -79817128 + L1_Mur2 LINE L1 518 884 -6202 2 765 467 189 156 0 chr15 23677844 23677966 -79817008 + L1_Mur2 LINE L1 3316 3456 -2421 2 765 3562 195 42 37 chr15 23678002 23678637 -79816337 + L1VL4 LINE L1 503 1145 -5512 2 765 3055 71 2 8 chr15 23678637 23679035 -79815939 - MTA_Mm LTR MaLR 0 396 1 2 765 15836 178 44 118 chr15 23679035 23681230 -79813744 + L1VL4 LINE L1 1146 3476 -2407 2 765 195 42 0 0 chr15 23681230 23681254 -79813720 + (CAA)n Simple_repeat Simple_repeat 1 24 0 2 765 15836 178 44 120 chr15 23681254 23683662 -79811312 + L1VL4 LINE L1 3477 5399 -484 2 765 348 252 149 0 chr15 23683662 23683769 -79811205 - Lx5 LINE L1 -347 6703 6581 2 765 1551 264 33 17 chr15 23684229 23684974 -79810000 - Lx5 LINE L1 -464 6586 5796 2 765 229 274 81 56 chr15 23685321 23685518 -79809456 + L1M4 LINE L1 4367 4568 -1578 2 765 324 0 0 0 chr15 23686014 23686050 -79808924 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 765 522 291 128 29 chr15 23686232 23686788 -79808186 + L1MC LINE L1 4629 5239 -907 2 765 782 297 34 62 chr15 23686821 23687325 -79807649 - Lx7 LINE L1 0 7696 6928 2 765 1051 197 74 105 chr15 23687326 23687503 -79807471 + Lx6 LINE L1 6390 6574 -886 2 765 732 186 14 7 chr15 23687503 23687644 -79807330 + B1_Mur4 SINE Alu 1 142 -8 2 765 1051 197 74 105 chr15 23687644 23687817 -79807157 + Lx6 LINE L1 6575 6729 -731 2 765 1503 194 121 61 chr15 23687910 23688306 -79806668 + MTC LTR MaLR 2 421 0 2 765 350 192 95 122 chr15 23688419 23688567 -79806407 + Lx3A LINE L1 6828 6971 -10 2 765 1253 232 91 19 chr15 23690803 23690967 -79804007 - ORR1D1 LTR MaLR -31 343 178 2 765 918 122 0 0 chr15 23690967 23691147 -79803827 + (GA)n Simple_repeat Simple_repeat 1 180 0 2 765 1253 232 91 19 chr15 23691147 23691302 -79803672 - ORR1D1 LTR MaLR -197 177 1 2 765 300 258 0 0 chr15 23691309 23691375 -79803599 - ORR1D1-int LTR MaLR -7 1363 1298 2 765 897 295 129 18 chr15 23691374 23691716 -79803258 - ORR1D1-int LTR MaLR -368 1002 623 2 765 1071 278 31 7 chr15 23691811 23692097 -79802877 - ORR1D1-int LTR MaLR -975 395 103 2 765 2405 217 86 14 chr15 23692121 23692705 -79802269 - Lx3C LINE L1 -2 6974 6349 2 765 309 89 0 0 chr15 23692886 23692931 -79802043 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 765 21 0 0 0 chr15 23693095 23693116 -79801858 + AT_rich Low_complexity Low_complexity 1 21 0 3 765 186 71 0 0 chr15 23693206 23693234 -79801740 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 765 343 395 65 11 chr15 23694146 23694407 -79800567 + Tigger7 DNA MER2_type 23 297 -2194 3 765 369 247 0 0 chr15 23694419 23694504 -79800470 + Lx9 LINE L1 7332 7416 -228 3 765 33 25 0 0 chr15 23694504 23694544 -79800430 + AT_rich Low_complexity Low_complexity 1 40 0 3 765 2258 184 78 13 chr15 23694568 23695040 -79799934 + RLTR11A LTR ERVK 26 528 0 3 765 557 218 54 12 chr15 23695096 23695263 -79799711 + Lx9 LINE L1 7460 7633 -11 3 765 998 53 8 0 chr15 23695260 23695391 -79799583 + L1Md_F2 LINE L1 5835 5966 -618 3 765 2919 65 0 13 chr15 23695391 23695782 -79799192 + L1Md_F2 LINE L1 6197 6582 0 3 765 5555 59 14 0 chr15 23695778 23696490 -79798484 + L1Md_F3 LINE L1 5862 6583 -1 3 765 280 332 105 50 chr15 23696707 23696926 -79798048 + Tigger7 DNA MER2_type 2238 2468 -23 3 765 555 276 68 51 chr15 23698073 23698249 -79796725 + B3 SINE B2 5 183 -33 3 765 260 291 26 0 chr15 23698250 23698367 -79796607 + (TA)n Simple_repeat Simple_repeat 2 121 0 3 765 28 0 0 0 chr15 23698900 23698928 -79796046 + AT_rich Low_complexity Low_complexity 1 28 0 3 765 297 0 0 0 chr15 23699940 23699973 -79795001 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 765 459 0 0 0 chr15 23699973 23700023 -79794951 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 765 34558 75 8 15 chr15 23700232 23706549 -79788425 - L1Md_F2 LINE L1 -1 6581 307 3 765 218 95 24 0 chr15 23706572 23706614 -79788360 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 765 243 122 0 0 chr15 23706607 23706656 -79788318 + (T)n Simple_repeat Simple_repeat 1 49 0 3 765 229 354 30 18 chr15 23706702 23706736 -79788238 - Lx5 LINE L1 -7 7453 7419 3 765 315 0 0 0 chr15 23706736 23706771 -79788203 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3 765 1624 258 156 38 chr15 23706771 23707266 -79787708 - Lx5 LINE L1 -42 7418 6479 3 765 1332 134 22 5 chr15 23707275 23707499 -79787475 - Lx5 LINE L1 -1180 5870 5643 3 765 241 317 19 38 chr15 23707963 23708068 -79786906 + MTE2b LTR MaLR 269 371 -8 3 765 216 0 0 0 chr15 23708068 23708092 -79786882 + (A)n Simple_repeat Simple_repeat 1 24 0 3 765 1587 282 140 4 chr15 23708146 23708683 -79786291 + Lx3C LINE L1 6356 6965 -11 3 765 841 264 25 15 chr15 23709294 23709490 -79785484 + B3 SINE B2 19 216 0 3 765 1153 249 126 0 chr15 23709930 23710255 -79784719 + ORR1D1 LTR MaLR 9 374 0 3 765 455 45 15 0 chr15 23710976 23711042 -79783932 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 765 22 0 0 0 chr15 23711251 23711273 -79783701 + AT_rich Low_complexity Low_complexity 1 22 0 3 765 22 35 0 0 chr15 23712684 23712713 -79782261 + AT_rich Low_complexity Low_complexity 1 29 0 3 765 1115 241 85 3 chr15 23712763 23713150 -79781824 + Lx9 LINE L1 7225 7643 -1 3 765 377 341 62 79 chr15 23713587 23713894 -79781080 - MTE2a LTR MaLR -31 388 56 3 765 262 211 9 9 chr15 23714086 23714191 -79780783 + (CA)n Simple_repeat Simple_repeat 2 106 0 3 765 387 0 0 0 chr15 23714523 23714566 -79780408 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 765 221 0 0 33 chr15 23714661 23714691 -79780283 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 3 765 1101 75 0 20 chr15 23714737 23714887 -79780087 - B1_Mus2 SINE Alu 0 147 1 3 765 229 174 29 0 chr15 23715412 23715481 -79779493 + GA-rich Low_complexity Low_complexity 1 71 0 3 765 223 205 50 25 chr15 23716094 23716174 -79778800 + T-rich Low_complexity Low_complexity 1 82 0 3 765 234 186 16 33 chr15 23716174 23716235 -79778739 - Lx6 LINE L1 -28 7432 7373 3 765 1253 134 34 67 chr15 23716246 23716485 -79778489 + MT2C_Mm LTR ERVL 1 231 -244 3 765 347 0 23 0 chr15 23716485 23716528 -79778446 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 3 765 6788 55 1 12 chr15 23716534 23717397 -79777577 - L1Md_F2 LINE L1 -20 6562 5709 3 765 8353 43 0 55 chr15 23717398 23718516 -79776458 + L1Md_F2 LINE L1 4642 5698 -185 3 765 1447 120 68 36 chr15 23718516 23718766 -79776208 + MT2C_Mm LTR ERVL 218 475 0 3 765 26 30 0 0 chr15 23718906 23718939 -79776035 + AT_rich Low_complexity Low_complexity 1 33 0 3 765 3548 230 40 34 chr15 23719814 23721011 -79773963 + L1_Mur2 LINE L1 892 2045 -3832 3 765 459 35 0 0 chr15 23721011 23721068 -79773906 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 765 3548 219 33 32 chr15 23721068 23721260 -79773714 + L1_Mur2 LINE L1 2046 2237 -3640 3 765 1486 192 29 6 chr15 23721259 23721574 -79773400 + L1_Mur2 LINE L1 3366 3687 -2193 3 765 450 0 0 0 chr15 23722512 23722562 -79772412 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 765 1749 249 107 8 chr15 23722562 23723047 -79771927 - Lx6 LINE L1 -15 7445 6913 3 765 1283 28 0 43 chr15 23723258 23723446 -79771528 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 3 765 292 174 16 65 chr15 23723446 23723569 -79771405 + T-rich Low_complexity Low_complexity 5 121 0 3 95 786 131 21 71 chr15 23723565 23724377 -79770597 + CT-rich Low_complexity Low_complexity 1 772 0 3 766 811 212 366 0 chr15 23724422 23724774 -79770200 - Lx9 LINE L1 -6 7638 7158 3 766 475 243 93 46 chr15 23724964 23725158 -79769816 + B3A SINE B2 14 216 0 3 766 21 71 0 0 chr15 23725570 23725612 -79769362 + AT_rich Low_complexity Low_complexity 1 42 0 3 766 3958 247 51 84 chr15 23725727 23727378 -79767596 - Lx7 LINE L1 -600 7096 5524 3 766 4886 142 14 20 chr15 23727555 23728364 -79766610 + Lx3C LINE L1 6171 6974 -2 3 766 22 56 0 0 chr15 23729154 23729190 -79765784 + AT_rich Low_complexity Low_complexity 1 36 0 3 766 888 37 0 0 chr15 23729944 23730052 -79764922 + (GA)n Simple_repeat Simple_repeat 1 108 0 3 766 2020 171 18 117 chr15 23730256 23730761 -79764213 - Lx7 LINE L1 -910 4967 4514 3 766 1317 88 62 5 chr15 23730761 23730956 -79764018 + L1Md_F2 LINE L1 6363 6568 -14 3 766 285 228 12 37 chr15 23730956 23730974 -79764000 - Lx7 LINE L1 -1599 4547 4531 3 766 31190 96 26 7 chr15 23730967 23733990 -79760984 + L1Md_F LINE L1 392 3476 -2407 3 766 282 29 0 0 chr15 23733990 23734025 -79760949 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 3 766 31190 85 11 10 chr15 23734025 23736242 -79758732 + L1Md_F LINE L1 3477 5694 -189 3 766 22 56 0 0 chr15 23736429 23736465 -79758509 + AT_rich Low_complexity Low_complexity 1 36 0 3 766 4967 146 20 11 chr15 23737258 23738076 -79756898 - Lx3C LINE L1 -3 6973 6149 3 766 3969 242 49 88 chr15 23738236 23739884 -79755090 + Lx7 LINE L1 5524 7096 -600 3 766 28 48 0 0 chr15 23740080 23740122 -79754852 + AT_rich Low_complexity Low_complexity 1 42 0 3 766 1566 81 9 0 chr15 23740367 23740578 -79754396 - L1Md_F2 LINE L1 -338 5545 5333 3 766 540 75 0 0 chr15 23740575 23740642 -79754332 + L1Md_F2 LINE L1 5520 5586 -297 3 766 6931 87 6 8 chr15 23740642 23741637 -79753337 + L1Md_F2 LINE L1 5587 6579 -3 3 766 249 108 0 0 chr15 23742200 23742237 -79752737 + (TAA)n Simple_repeat Simple_repeat 2 38 0 3 766 3443 89 2 6 chr15 23742977 23743451 -79751523 - L1Md_F2 LINE L1 -9 6573 6102 3 766 4811 65 3 1 chr15 23743451 23744297 -79750677 + L1Md_F2 LINE L1 5253 6100 -482 3 766 33 25 0 0 chr15 23744758 23744798 -79750176 + AT_rich Low_complexity Low_complexity 1 40 0 3 766 5556 112 2 1 chr15 23744818 23745626 -79749348 + L1_Mus3 LINE L1 5824 6632 -6 3 766 280 381 134 17 chr15 23745791 23746090 -79748884 + ORR1E LTR MaLR 21 354 -5 3 766 554 356 54 83 chr15 23746109 23746253 -79748721 + ORR1E-int LTR MaLR 14 145 -1435 3 766 1006 110 14 0 chr15 23746253 23746399 -79748575 + B1_Mus1 SINE Alu 1 148 0 3 766 554 356 54 83 chr15 23746399 23746698 -79748276 + ORR1E-int LTR MaLR 146 444 -1136 3 766 463 235 0 30 chr15 23746770 23746871 -79748103 - B1_Mus2 SINE Alu -37 110 13 3 766 320 333 29 19 chr15 23747118 23747222 -79747752 - B3 SINE B2 -98 118 14 3 766 567 243 28 17 chr15 23747260 23747436 -79747538 + MER53 DNA hAT 15 192 -1 3 766 504 0 0 0 chr15 23747879 23747935 -79747039 + (GA)n Simple_repeat Simple_repeat 2 57 0 3 766 783 319 35 13 chr15 23748043 23748272 -79746702 + MTD LTR MaLR 186 419 0 3 766 1683 29 10 0 chr15 23748528 23748736 -79746238 - L1Md_F3 LINE L1 -495 6089 5880 3 766 3739 46 15 0 chr15 23748734 23749195 -79745779 + L1Md_F3 LINE L1 6095 6562 -22 3 766 360 309 163 6 chr15 23749247 23749413 -79745561 + B3A SINE B2 5 196 -2 3 766 222 312 0 12 chr15 23749485 23749566 -79745408 + GA-rich Low_complexity Low_complexity 3 82 0 3 766 3397 38 0 0 chr15 23749910 23750306 -79744668 + MTA_Mm LTR MaLR 1 396 0 3 766 669 93 0 0 chr15 23750383 23750490 -79744484 + (CA)n Simple_repeat Simple_repeat 2 108 0 3 766 565 308 97 67 chr15 23750565 23750938 -79744036 - RMER20A LTR ERVK 0 516 133 3 766 275 136 0 0 chr15 23751165 23751209 -79743765 + Lx3C LINE L1 6924 6967 -9 3 766 420 20 0 0 chr15 23751210 23751259 -79743715 + (TAA)n Simple_repeat Simple_repeat 1 49 0 3 766 2807 200 32 45 chr15 23751286 23751904 -79743070 + RMER19C LTR ERVK 1 610 -1 3 766 266 311 68 90 chr15 23751970 23752147 -79742827 - Lx9 LINE L1 -480 7164 6992 3 766 683 250 31 7 chr15 23752149 23752347 -79742627 - ORR1C1 LTR MaLR 0 378 140 3 766 747 174 30 0 chr15 23752352 23752484 -79742490 + B1_Mur4 SINE Alu 14 149 -1 3 766 554 52 26 0 chr15 23752488 23752565 -79742409 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 3 766 545 227 55 17 chr15 23752566 23752715 -79742259 - ORR1C1 LTR MaLR -244 134 1 3 766 1077 310 49 21 chr15 23752715 23753183 -79741791 - Lx9 LINE L1 -649 6995 6515 3 766 1397 229 90 14 chr15 23753521 23753932 -79741042 + RLTR1B LTR ERV1 54 512 0 3 766 783 177 124 56 chr15 23753932 23754357 -79740617 + RLTR1B-int LTR ERV1 1 515 -7041 3 766 203 0 37 0 chr15 23754409 23754436 -79740538 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 3 766 334 275 141 0 chr15 23754806 23754955 -79740019 - LSU-rRNA_Hsa rRNA rRNA -1701 3334 3165 3 766 5997 175 56 62 chr15 23754959 23757658 -79737316 + RLTR1B-int LTR ERV1 1081 4273 -790 3 766 418 177 3 14 chr15 23757696 23757830 -79737144 + RLTR1B-int LTR ERV1 3231 3298 -1 3 766 1047 226 201 13 chr15 23757923 23758241 -79736733 + RLTR1B LTR ERV1 135 512 0 3 766 38 51 0 0 chr15 23758269 23758328 -79736646 + AT_rich Low_complexity Low_complexity 1 59 0 3 766 231 308 89 28 chr15 23758345 23758559 -79736415 + Lx9 LINE L1 6254 6480 -1164 3 766 363 89 0 0 chr15 23758878 23758934 -79736040 + (TTTA)n Simple_repeat Simple_repeat 1 56 0 3 766 882 134 0 21 chr15 23758943 23759088 -79735886 - B1_Mus1 SINE Alu 0 148 7 3 766 750 99 0 0 chr15 23759239 23759350 -79735624 - L1_Mus1 LINE L1 0 6567 6457 3 766 373 390 28 7 chr15 23760539 23760681 -79734293 - RSINE1 SINE B4 -12 153 9 3 766 479 300 26 13 chr15 23761341 23761493 -79733481 - Lx8 LINE L1 -958 6515 6362 3 766 531 316 101 66 chr15 23761521 23761748 -79733226 + MTD LTR MaLR 50 284 -135 3 766 247 379 22 15 chr15 23761896 23762030 -79732944 - Lx8 LINE L1 -1134 6339 6205 3 766 323 234 11 0 chr15 23762065 23762159 -79732815 + (CA)n Simple_repeat Simple_repeat 2 96 0 3 766 1365 328 63 16 chr15 23762303 23762861 -79732113 + Lx7 LINE L1 6265 6848 -848 3 766 216 86 0 0 chr15 23763129 23763164 -79731810 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 766 717 252 97 42 chr15 23763679 23763989 -79730985 - RMER10A LTR ERVL -1 441 115 4 766 1023 214 5 23 chr15 23764024 23764244 -79730730 + ORR1B2 LTR MaLR 100 315 -52 4 766 26 0 0 0 chr15 23764548 23764574 -79730400 + AT_rich Low_complexity Low_complexity 1 26 0 4 766 649 284 0 0 chr15 23765030 23765171 -79729803 - B1F2 SINE Alu -3 146 6 4 766 295 382 57 6 chr15 23765057 23765215 -79729759 - B4 SINE B4 -84 208 43 4 766 1776 182 9 3 chr15 23765325 23765640 -79729334 + Lx4A LINE L1 6739 7055 -3 4 766 296 48 24 0 chr15 23765985 23766027 -79728947 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 766 288 20 20 39 chr15 23766066 23766117 -79728857 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 4 766 22 56 0 0 chr15 23767131 23767167 -79727807 + AT_rich Low_complexity Low_complexity 1 36 0 4 766 355 267 16 32 chr15 23768724 23768848 -79726126 - L1MA6 LINE L1 -342 5958 5837 4 766 882 306 113 30 chr15 23768880 23769287 -79725687 - Lx6 LINE L1 -28 7432 6992 4 766 5105 160 59 9 chr15 23769323 23770250 -79724724 - Lx4A LINE L1 -2 7056 6083 4 766 21 82 0 0 chr15 23770487 23770536 -79724438 + AT_rich Low_complexity Low_complexity 1 49 0 4 766 25 0 0 0 chr15 23770605 23770630 -79724344 + AT_rich Low_complexity Low_complexity 1 25 0 4 766 7219 70 7 5 chr15 23770795 23771744 -79723230 - L1Md_F2 LINE L1 -9 6573 5623 4 766 35 63 0 0 chr15 23771891 23771954 -79723020 + AT_rich Low_complexity Low_complexity 1 63 0 4 766 409 370 32 59 chr15 23772009 23772230 -79722744 + B3 SINE B2 2 216 0 4 766 534 170 25 25 chr15 23772275 23772438 -79722536 + (CATA)n Simple_repeat Simple_repeat 2 164 0 4 766 1769 242 60 77 chr15 23773480 23774333 -79720641 + L1_Mur3 LINE L1 819 1728 -4148 4 766 1030 82 0 0 chr15 23774333 23774467 -79720507 + B1_Mm SINE Alu 7 140 -7 4 766 798 109 0 0 chr15 23774468 23774587 -79720387 + (GGAA)n Simple_repeat Simple_repeat 3 121 0 4 766 2843 206 35 41 chr15 23774587 23775369 -79719605 + L1_Mur3 LINE L1 1730 2499 -3378 4 766 304 180 66 0 chr15 23775357 23775418 -79719556 + L1_Mur3 LINE L1 2895 2959 -2921 4 766 832 70 0 25 chr15 23775795 23775913 -79719061 - B1_Mm SINE Alu 0 147 33 4 766 465 341 91 64 chr15 23776085 23776427 -79718547 - MLT1A1 LTR MaLR -14 394 44 4 766 23 54 0 0 chr15 23776765 23776802 -79718172 + AT_rich Low_complexity Low_complexity 1 37 0 4 766 302 296 129 52 chr15 23776838 23777109 -79717865 + LTR65 LTR ERV1 52 343 -326 4 766 1018 232 159 85 chr15 23778693 23779221 -79715753 + RMER2 LTR ERV1 1 567 0 4 766 234 81 0 0 chr15 23779516 23779553 -79715421 + (A)n Simple_repeat Simple_repeat 1 37 0 4 766 738 0 0 0 chr15 23780506 23780588 -79714386 + (GA)n Simple_repeat Simple_repeat 2 83 0 4 766 371 205 69 132 chr15 23781735 23781909 -79713065 + MT2B LTR ERVL 102 264 -320 4 766 1019 80 7 0 chr15 23781803 23781941 -79713033 + B1_Mus1 SINE Alu 7 145 -3 4 766 531 47 11 34 chr15 23781941 23782030 -79712944 + (TAAA)n Simple_repeat Simple_repeat 2 88 0 4 766 274 281 104 0 chr15 23783663 23783759 -79711215 - RLTR42-int LTR ERVK -4153 1369 1264 4 766 284 271 21 0 chr15 23783775 23783871 -79711103 - RLTR42-int LTR ERVK -4318 1204 1107 4 766 3243 51 5 0 chr15 23784695 23785089 -79709885 - MTA_Mm LTR MaLR 0 396 1 4 766 365 264 63 16 chr15 23785787 23785914 -79709060 + Lx8 LINE L1 6787 6919 -554 4 766 1152 319 104 20 chr15 23785978 23786120 -79708854 + L1M2 LINE L1 3527 3669 -2474 4 766 432 0 0 0 chr15 23786120 23786168 -79708806 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 766 1294 311 84 14 chr15 23786168 23786973 -79708001 + L1_Mur3 LINE L1 3661 4522 -1358 4 766 1171 252 119 9 chr15 23786978 23787298 -79707676 + MTD LTR MaLR 6 360 -59 4 766 4197 145 41 10 chr15 23787367 23788079 -79706895 + Lx LINE L1 5903 6636 -18 4 766 451 306 68 53 chr15 23789025 23789215 -79705759 + B4A SINE B4 27 219 -73 4 766 3117 77 21 5 chr15 23789225 23789655 -79705319 + L1Md_F2 LINE L1 6146 6582 0 4 766 1028 31 37 29 chr15 23790552 23791173 -79703801 + (GA)n Simple_repeat Simple_repeat 1 625 0 4 766 206 279 0 0 chr15 23791666 23791745 -79703229 + T-rich Low_complexity Low_complexity 1 79 0 4 766 232 333 0 0 chr15 23791802 23791871 -79703103 - B1F SINE Alu -64 85 17 4 766 5225 78 6 1 chr15 23792104 23792808 -79702166 + L1_Mus2 LINE L1 5859 6565 -1 4 766 400 0 18 35 chr15 23794110 23794167 -79700807 + (CAA)n Simple_repeat Simple_repeat 2 57 0 4 766 223 122 82 0 chr15 23794527 23794576 -79700398 + A-rich Low_complexity Low_complexity 3 55 0 4 766 609 162 0 0 chr15 23795711 23795822 -79699152 + GA-rich Low_complexity Low_complexity 1 111 0 4 766 1694 79 0 0 chr15 23796598 23796814 -79698160 - Lx3_Mus LINE L1 -587 6422 6207 4 766 432 0 0 0 chr15 23797333 23797381 -79697593 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 766 305 273 23 0 chr15 23798258 23798276 -79696698 + (TCTG)n Simple_repeat Simple_repeat 2 20 0 4 766 590 68 0 11 chr15 23798276 23798365 -79696609 + (TCCA)n Simple_repeat Simple_repeat 3 90 0 4 766 305 273 23 0 chr15 23798365 23798434 -79696540 + (TCTG)n Simple_repeat Simple_repeat 4 73 0 4 766 305 343 68 71 chr15 23799322 23799630 -79695344 - MT2A LTR ERVL -212 321 15 4 766 407 294 29 0 chr15 23799889 23799991 -79694983 - PB1D7 SINE Alu -15 105 1 4 766 883 282 0 19 chr15 23801147 23801353 -79693621 + B3 SINE B2 8 209 -7 4 766 303 353 31 25 chr15 23801410 23801570 -79693404 + LTR16A1 LTR ERVL 296 456 0 4 766 854 283 35 43 chr15 23802528 23802875 -79692099 + Lx9 LINE L1 6746 7089 -555 4 766 240 206 159 53 chr15 23802876 23802989 -79691985 - LTRIS_Mus LTR ERV1 -408 179 55 4 766 262 365 20 31 chr15 23802989 23803184 -79691790 + Lx9 LINE L1 7218 7410 -234 4 766 358 308 0 64 chr15 23803184 23803309 -79691665 + RMER12 LTR ERVK 759 875 -447 4 766 800 115 15 0 chr15 23804054 23804184 -79690790 + (TTTC)n Simple_repeat Simple_repeat 2 133 0 4 766 234 81 0 0 chr15 23804911 23804948 -79690026 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 4 766 450 0 0 0 chr15 23805035 23805085 -79689889 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 766 331 331 17 17 chr15 23806385 23806557 -79688417 - Lx6 LINE L1 -175 7285 7114 4 766 241 244 66 50 chr15 23806589 23806710 -79688264 + Lx6 LINE L1 6020 6142 -1318 4 766 3144 74 2 7 chr15 23806714 23807137 -79687837 + L1Md_F2 LINE L1 6161 6581 -1 4 766 186 43 0 0 chr15 23807171 23807194 -79687780 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 4 766 487 270 127 12 chr15 23807201 23807366 -79687608 + Lx5 LINE L1 6180 6363 -687 4 766 490 321 62 36 chr15 23807369 23807563 -79687411 + Lx5 LINE L1 6485 6683 -367 4 766 21 0 0 0 chr15 23808416 23808437 -79686537 + AT_rich Low_complexity Low_complexity 1 21 0 4 766 321 65 0 0 chr15 23808851 23808870 -79686104 + (TA)n Simple_repeat Simple_repeat 2 20 0 4 766 477 0 0 0 chr15 23808870 23808923 -79686051 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 766 321 65 0 0 chr15 23808923 23808949 -79686025 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 766 2638 133 165 28 chr15 23809416 23809949 -79685025 - Lx LINE L1 -3 6651 6046 4 766 195 42 0 0 chr15 23810498 23810522 -79684452 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 4 766 1254 91 0 11 chr15 23810537 23810714 -79684260 + B2_Mm2 SINE B2 2 176 -19 4 766 2314 93 21 0 chr15 23810763 23811097 -79683877 - L1_Mus3 LINE L1 -7 6631 6291 4 766 246 232 34 34 chr15 23811176 23811265 -79683709 + (CATA)n Simple_repeat Simple_repeat 2 90 0 4 766 25 0 0 0 chr15 23811591 23811616 -79683358 + AT_rich Low_complexity Low_complexity 1 25 0 4 766 768 104 0 0 chr15 23811952 23812086 -79682888 + (GA)n Simple_repeat Simple_repeat 1 134 0 4 766 425 191 0 9 chr15 23812476 23812592 -79682382 + (CA)n Simple_repeat Simple_repeat 2 116 0 4 766 850 173 11 6 chr15 23813264 23813444 -79681530 + Lx2 LINE L1 6814 6994 -3 4 766 270 0 0 0 chr15 23813807 23813837 -79681137 + (ATG)n Simple_repeat Simple_repeat 1 30 0 4 766 12513 87 2 5 chr15 23813837 23815748 -79679226 - L1Md_F2 LINE L1 -25 6557 4650 4 766 3515 13 2 0 chr15 23815748 23816143 -79678831 + MTA_Mm LTR MaLR 1 396 0 4 766 8844 40 6 2 chr15 23816143 23817236 -79677738 + MTA_Mm-int LTR MaLR 1 1098 0 4 766 3515 13 2 0 chr15 23817236 23817631 -79677343 + MTA_Mm LTR MaLR 1 396 0 4 766 12513 73 3 5 chr15 23817631 23818054 -79676920 - L1Md_F2 LINE L1 -1234 4649 4229 4 766 12433 75 2 18 chr15 23818050 23819793 -79675181 + L1Md_F2 LINE L1 2492 4206 -1677 4 766 558 104 0 0 chr15 23820287 23820383 -79674591 + (TA)n Simple_repeat Simple_repeat 1 96 0 4 766 616 271 88 115 chr15 23820478 23820862 -79674112 + ORR1C1 LTR MaLR 1 374 -4 4 766 27 0 0 0 chr15 23820896 23820923 -79674051 + AT_rich Low_complexity Low_complexity 1 27 0 4 766 22 35 0 0 chr15 23822327 23822356 -79672618 + AT_rich Low_complexity Low_complexity 1 29 0 4 766 2023 172 40 24 chr15 23822356 23822731 -79672243 - Lx4A LINE L1 -4 7054 6674 4 766 1923 153 57 51 chr15 23822731 23823103 -79671871 + Lx4A LINE L1 6204 6577 -481 4 766 791 178 0 6 chr15 23823554 23823724 -79671250 + (TA)n Simple_repeat Simple_repeat 1 169 0 4 766 262 350 82 68 chr15 23824559 23824706 -79670268 - B1F1 SINE Alu 0 149 1 4 766 5855 138 17 8 chr15 23824962 23825922 -79669052 + Lx3A LINE L1 6013 6980 -1 4 766 4968 159 22 47 chr15 23826364 23827040 -79667934 - Lx3B LINE L1 -4 6969 6307 4 766 2860 84 5 10 chr15 23827040 23827438 -79667536 + MTA_Mm LTR MaLR 1 396 0 4 766 6395 96 16 136 chr15 23827438 23828686 -79666288 + MTA_Mm-int LTR MaLR 1 1098 0 4 766 2354 92 117 6 chr15 23828686 23829046 -79665928 + MTA_Mm LTR MaLR 1 400 0 4 766 4968 159 22 47 chr15 23829046 23829332 -79665642 - Lx3B LINE L1 -667 6306 6031 4 766 628 245 29 89 chr15 23829860 23830118 -79664856 + ORR1E LTR MaLR 114 411 -8 4 766 22 0 0 0 chr15 23830271 23830293 -79664681 + AT_rich Low_complexity Low_complexity 1 22 0 4 766 702 109 0 0 chr15 23832501 23832620 -79662354 + (TG)n Simple_repeat Simple_repeat 1 119 0 4 766 346 268 62 48 chr15 23832620 23832765 -79662209 - Lx8 LINE L1 -356 7117 6971 4 766 21 36 0 0 chr15 23833377 23833405 -79661569 + AT_rich Low_complexity Low_complexity 1 28 0 4 766 1183 48 7 0 chr15 23833415 23833561 -79661413 - B1_Mus1 SINE Alu 0 148 2 5 766 350 280 84 77 chr15 23834152 23834307 -79660667 + RSINE1 SINE B4 2 157 -8 5 766 279 254 28 0 chr15 23834355 23834426 -79660548 + Lx8 LINE L1 6411 6483 -990 5 766 464 146 0 55 chr15 23834445 23834554 -79660420 - Lx LINE L1 -7 6647 6545 5 766 5603 161 18 2 chr15 23834554 23835559 -79659415 - L1_Mur2 LINE L1 -1445 4432 3412 5 766 707 269 70 98 chr15 23835623 23835859 -79659115 - ORR1D1 LTR MaLR 0 374 140 5 766 1450 150 24 0 chr15 23835859 23836113 -79658861 - Lx2 LINE L1 -1 6996 6737 5 766 707 269 70 98 chr15 23836113 23836234 -79658740 - ORR1D1 LTR MaLR -235 139 27 5 766 1820 322 48 9 chr15 23836272 23836921 -79658053 + Lx8 LINE L1 6553 7226 -247 5 766 27 62 0 0 chr15 23837409 23837457 -79657517 + AT_rich Low_complexity Low_complexity 1 48 0 5 766 216 97 0 0 chr15 23838150 23838181 -79656793 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 766 297 231 65 49 chr15 23838376 23838499 -79656475 - L1_Mur3 LINE L1 -822 5058 4934 5 766 380 308 105 19 chr15 23838861 23839023 -79655951 + MTD LTR MaLR 229 404 -15 5 766 626 306 75 0 chr15 23839260 23839459 -79655515 + B3 SINE B2 1 214 -2 5 766 23 54 0 0 chr15 23839562 23839599 -79655375 + AT_rich Low_complexity Low_complexity 1 37 0 5 766 27 49 0 0 chr15 23839695 23839736 -79655238 + AT_rich Low_complexity Low_complexity 1 41 0 5 766 27 0 0 0 chr15 23840051 23840078 -79654896 + AT_rich Low_complexity Low_complexity 1 27 0 5 766 1497 98 21 8 chr15 23840520 23840756 -79654218 + ORR1A2-int LTR MaLR 1725 1963 0 5 766 1868 156 31 6 chr15 23840756 23841073 -79653901 + ORR1A2 LTR MaLR 1 325 -2 5 766 977 165 60 5 chr15 23841086 23841287 -79653687 + L1_Mur2 LINE L1 3835 4046 -1831 5 766 213 373 40 48 chr15 23841420 23841544 -79653430 + B3A SINE B2 60 182 -16 5 766 401 258 11 0 chr15 23842703 23842796 -79652178 + MTC LTR MaLR 9 102 -319 5 766 613 238 33 0 chr15 23842797 23842948 -79652026 + URR1A DNA MER1_type 1 156 -70 5 766 7328 50 3 2 chr15 23842948 23843868 -79651106 + L1Md_F3 LINE L1 5664 6584 0 5 766 889 245 48 9 chr15 23843869 23844079 -79650895 + MTC LTR MaLR 199 416 -5 5 766 23 0 0 0 chr15 23844243 23844266 -79650708 + AT_rich Low_complexity Low_complexity 1 23 0 5 766 1138 320 61 26 chr15 23845310 23845734 -79649240 - RMER15 LTR ERVL -109 466 28 5 766 237 318 24 0 chr15 23846288 23846373 -79648601 - MLT1A LTR MaLR -273 101 15 5 766 374 277 71 34 chr15 23846988 23847227 -79647747 + L1M4 LINE L1 3898 4145 -2001 5 766 4652 24 0 0 chr15 23847260 23847798 -79647176 - L1Md_A LINE L1 -299 6283 5746 5 766 2340 39 0 0 chr15 23847798 23848080 -79646894 + L1Md_A LINE L1 6300 6581 -1 5 766 1513 43 0 5 chr15 23849379 23849567 -79645407 - B2_Mm1t SINE B2 -6 187 1 5 766 806 314 53 31 chr15 23849710 23850032 -79644942 - MER2 DNA MER2_type -10 335 7 5 766 190 164 36 0 chr15 23850422 23850477 -79644497 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 5 766 1061 315 93 29 chr15 23851012 23851568 -79643406 + Charlie25 DNA MER1_type 673 1264 -1260 5 766 476 325 121 26 chr15 23852508 23852855 -79642119 + Lx8 LINE L1 7091 7470 -3 5 766 30 45 0 0 chr15 23854193 23854237 -79640737 + AT_rich Low_complexity Low_complexity 1 44 0 5 766 423 0 0 0 chr15 23854294 23854341 -79640633 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 766 846 337 37 23 chr15 23854372 23854721 -79640253 - MT2A LTR ERVL -179 354 1 5 95 1345 357 70 48 chr15 23854721 23855766 -79639208 - MTE-int LTR MaLR -455 1125 58 5 767 20175 23 0 0 chr15 23856620 23859655 -79635319 - L1Md_A LINE L1 -2 6580 3546 5 767 1446 193 23 3 chr15 23859695 23859996 -79634978 - L1_Mur2 LINE L1 -487 5390 5084 5 767 3717 221 52 1 chr15 23859984 23860780 -79634194 + Lx5 LINE L1 6206 7041 -9 5 767 428 319 0 121 chr15 23860829 23861011 -79633963 + RSINE1 SINE B4 6 165 0 5 767 21 36 0 0 chr15 23861566 23861594 -79633380 + AT_rich Low_complexity Low_complexity 1 28 0 5 767 299 309 96 22 chr15 23861735 23862099 -79632875 + L1MD LINE L1 3535 3925 -2221 5 767 28 29 0 0 chr15 23862199 23862234 -79632740 + AT_rich Low_complexity Low_complexity 1 35 0 5 767 590 60 12 0 chr15 23863162 23863245 -79631729 + (TAGA)n Simple_repeat Simple_repeat 3 86 0 5 767 277 335 100 25 chr15 23864053 23864292 -79630682 - MLT1H-int LTR MaLR -1004 405 149 5 767 762 294 90 64 chr15 23865043 23865388 -79629586 + RLTR18 LTR ERVK 1 354 -262 5 767 414 232 127 38 chr15 23865392 23865549 -79629425 + RLTR18B LTR ERVK 269 439 -73 5 767 528 16 0 0 chr15 23865554 23865615 -79629359 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 767 23 33 0 0 chr15 23865914 23865944 -79629030 + AT_rich Low_complexity Low_complexity 1 30 0 5 767 234 0 0 0 chr15 23866033 23866059 -79628915 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 767 869 106 0 22 chr15 23866653 23866837 -79628137 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 767 261 0 0 0 chr15 23866848 23866877 -79628097 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 767 587 263 36 7 chr15 23866913 23867051 -79627923 - B3A SINE B2 -55 143 2 5 767 2592 219 8 46 chr15 23867321 23867929 -79627045 + Lx2B LINE L1 6414 6998 -2 5 767 3275 11 0 0 chr15 23868024 23868393 -79626581 + L1Md_A LINE L1 5218 5586 -297 5 767 8785 14 1 0 chr15 23868393 23869388 -79625586 + L1Md_A LINE L1 5587 6582 0 5 767 331 340 34 53 chr15 23869450 23869714 -79625260 + L1M5 LINE L1 5002 5260 -886 5 767 22 0 0 0 chr15 23869774 23869796 -79625178 + AT_rich Low_complexity Low_complexity 1 22 0 5 767 1173 68 0 0 chr15 23870138 23870284 -79624690 - B1_Mus2 SINE Alu -1 146 1 5 767 417 158 104 10 chr15 23870359 23870455 -79624519 - RLTR11A2 LTR ERVK 0 527 423 5 767 741 253 65 15 chr15 23870459 23870660 -79624314 - RLTR11A2 LTR ERVK -260 267 57 5 767 1755 224 35 35 chr15 23870678 23871192 -79623782 - MYSERV-int LTR ERVK -1 6549 6036 5 767 857 246 64 85 chr15 23871188 23871578 -79623396 - MYSERV16_I-int LTR ERVK -989 1337 956 5 767 1120 75 7 0 chr15 23871584 23871731 -79623243 + B1_Mus1 SINE Alu 1 148 0 5 767 387 113 0 0 chr15 23871757 23871828 -79623146 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 5 767 513 0 0 0 chr15 23871903 23871960 -79623014 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 767 929 84 6 19 chr15 23872525 23872682 -79622292 + (GAAA)n Simple_repeat Simple_repeat 3 157 0 5 767 540 349 78 22 chr15 23872699 23873021 -79621953 + Lx8 LINE L1 6972 7311 -162 5 767 575 289 0 7 chr15 23873563 23873706 -79621268 + Lx5 LINE L1 6898 7039 -11 5 767 671 24 12 0 chr15 23873720 23873805 -79621169 + (GA)n Simple_repeat Simple_repeat 2 87 0 5 767 239 157 28 28 chr15 23874402 23874439 -79620535 + polypurine Low_complexity Low_complexity 2 38 0 5 767 1097 113 6 0 chr15 23874439 23874616 -79620358 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 5 767 239 157 28 28 chr15 23874616 23874650 -79620324 + polypurine Low_complexity Low_complexity 39 73 0 5 767 876 259 32 18 chr15 23874650 23874870 -79620104 + MTD LTR MaLR 197 419 0 5 767 257 205 154 0 chr15 23875088 23875205 -79619769 - MER33 DNA MER1_type -98 226 92 5 767 8394 139 27 1 chr15 23875707 23877068 -79617906 + Lx2 LINE L1 5601 6996 -1 5 767 1075 95 0 0 chr15 23877079 23877226 -79617748 + B1_Mm SINE Alu 1 147 0 5 767 195 69 0 0 chr15 23877226 23877255 -79617719 + (A)n Simple_repeat Simple_repeat 1 29 0 5 767 30199 94 47 12 chr15 23877416 23883334 -79611640 - L1Md_F2 LINE L1 -4 6578 417 5 767 209 382 27 20 chr15 23884028 23884175 -79610799 - MIRb SINE MIR -6 262 115 5 767 21 0 0 0 chr15 23885825 23885846 -79609128 + AT_rich Low_complexity Low_complexity 1 21 0 5 767 5325 131 5 12 chr15 23885878 23886703 -79608271 - Lx LINE L1 -14 6640 5822 5 767 952 61 106 0 chr15 23886920 23887052 -79607922 - B1_Mus1 SINE Alu 0 148 3 5 767 1950 73 11 11 chr15 23887827 23888104 -79606870 + L1_Mm LINE L1 5264 5540 -343 5 767 2617 9 17 83 chr15 23888104 23888454 -79606520 + IAPLTR2a LTR ERVK 1 327 0 5 767 1106 137 44 19 chr15 23888455 23888719 -79606255 + IAPEz-int LTR ERVK 9 252 -7329 5 767 229 321 0 0 chr15 23888719 23888772 -79606202 + RLTR27 LTR ERVK 223 275 -34 5 767 4712 94 70 55 chr15 23888772 23889663 -79605311 + IAPEz-int LTR ERVK 168 995 -5486 5 767 352 88 0 0 chr15 23889663 23889720 -79605254 + B1_Mus1 SINE Alu 1 57 -91 5 767 1831 88 4 0 chr15 23889725 23889964 -79605010 + IAPEY3-int LTR ERVK 2258 2497 -5183 5 767 2647 131 0 0 chr15 23889963 23890346 -79604628 + IAPEz-int LTR ERVK 4656 5038 -1443 5 767 5968 87 20 2 chr15 23890336 23891147 -79603827 + IAPEz-int LTR ERVK 5655 6479 -2 5 767 2675 23 161 0 chr15 23891149 23891503 -79603471 + IAPLTR2a LTR ERVK 1 411 0 5 767 7081 94 6 3 chr15 23891503 23892531 -79602443 + L1_Mus2 LINE L1 5535 6564 -2 5 767 485 343 86 20 chr15 23892740 23893043 -79601931 + Lx8 LINE L1 7146 7468 -5 5 767 3293 52 2 0 chr15 23893135 23893543 -79601431 - L1Md_F3 LINE L1 -234 5649 5241 5 767 7150 52 10 1 chr15 23893543 23894446 -79600528 + L1Md_F3 LINE L1 5660 6570 -14 5 767 1268 180 265 6 chr15 23894579 23894892 -79600082 + ORR1B1 LTR MaLR 1 394 0 5 767 3933 134 21 13 chr15 23894911 23895540 -79599434 + Lx3A LINE L1 6341 6974 -7 5 767 42 36 0 0 chr15 23895542 23895598 -79599376 + AT_rich Low_complexity Low_complexity 1 56 0 5 767 469 309 75 29 chr15 23895763 23896043 -79598931 - Lx9 LINE L1 -216 7428 7136 5 767 343 288 62 84 chr15 23896030 23896257 -79598717 + Lx9 LINE L1 6922 7143 -501 5 767 22 35 0 0 chr15 23896539 23896568 -79598406 + AT_rich Low_complexity Low_complexity 1 29 0 5 767 325 364 23 85 chr15 23896800 23896977 -79597997 + B4 SINE B4 1 166 -126 5 767 217 156 0 22 chr15 23897096 23897142 -79597832 + CT-rich Low_complexity Low_complexity 1 45 0 5 767 226 312 116 61 chr15 23898470 23898634 -79596340 - MTEb LTR MaLR -39 340 168 5 767 236 240 0 0 chr15 23898652 23898702 -79596272 - MTEb LTR MaLR -327 52 3 5 767 643 134 28 7 chr15 23898959 23899102 -79595872 + (TA)n Simple_repeat Simple_repeat 2 147 0 5 767 339 180 11 0 chr15 23899178 23899267 -79595707 + Lx9 LINE L1 7530 7619 -25 5 767 206 32 0 31 chr15 23899827 23899859 -79595115 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 5 767 955 112 29 29 chr15 23899994 23900168 -79594806 + L1Md_F2 LINE L1 6409 6582 0 5 767 2173 122 22 0 chr15 23900198 23900518 -79594456 - ORR1A2 LTR MaLR 0 327 1 5 767 512 221 7 99 chr15 23901165 23901255 -79593719 - Lx9 LINE L1 -536 7108 7018 6 767 6272 154 50 17 chr15 23901255 23902450 -79592524 - Lx2 LINE L1 0 6997 5763 6 767 512 221 7 99 chr15 23902450 23902510 -79592464 - Lx9 LINE L1 -627 7017 6972 6 767 945 181 107 0 chr15 23902517 23902760 -79592214 + Lx9 LINE L1 7375 7643 -1 6 767 9788 71 2 2 chr15 23902785 23903714 -79591260 + L1Md_F LINE L1 330 1258 -4625 6 767 392 0 21 0 chr15 23903714 23903762 -79591212 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 6 767 9788 95 7 3 chr15 23903762 23905147 -79589827 + L1Md_F LINE L1 1259 2649 -3234 6 767 1277 84 53 34 chr15 23905157 23905365 -79589609 + L1Md_A LINE L1 6370 6581 -1 6 767 1152 44 0 0 chr15 23905365 23905500 -79589474 + L1Md_F2 LINE L1 5452 5586 -297 6 767 7686 63 4 1 chr15 23905501 23906493 -79588481 + L1Md_F2 LINE L1 5588 6582 0 6 767 378 0 0 0 chr15 23906947 23906989 -79587985 + (TTA)n Simple_repeat Simple_repeat 3 44 0 6 767 1765 163 42 28 chr15 23907960 23908314 -79586660 - RMER17B LTR ERVK -2 956 598 6 767 247 376 68 0 chr15 23909575 23909692 -79585282 - MER89 LTR ERV1 -9 550 426 6 767 764 350 81 21 chr15 23910661 23911397 -79583577 - Lx8 LINE L1 -593 7103 6318 6 767 333 0 0 0 chr15 23911557 23911594 -79583380 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 767 27 0 0 0 chr15 23912769 23912796 -79582178 + AT_rich Low_complexity Low_complexity 1 27 0 6 767 270 0 0 0 chr15 23913060 23913090 -79581884 + (T)n Simple_repeat Simple_repeat 1 30 0 6 767 25 0 0 0 chr15 23914060 23914085 -79580889 + AT_rich Low_complexity Low_complexity 1 25 0 6 767 999 153 4 0 chr15 23914297 23914533 -79580441 + (TA)n Simple_repeat Simple_repeat 1 236 0 6 767 5967 96 51 0 chr15 23915508 23916377 -79578597 - Lx3_Mus LINE L1 -3 7006 6094 6 767 780 51 0 0 chr15 23916381 23916479 -79578495 + Lx3_Mus LINE L1 5739 5836 -1173 6 767 459 278 37 0 chr15 23918017 23918125 -79576849 - B3 SINE B2 -100 116 5 6 767 22 56 0 0 chr15 23918128 23918164 -79576810 + AT_rich Low_complexity Low_complexity 1 36 0 6 767 216 0 0 0 chr15 23918225 23918249 -79576725 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 767 559 255 74 12 chr15 23918341 23918504 -79576470 - ORR1D2 LTR MaLR -9 361 189 6 767 216 0 0 0 chr15 23918531 23918555 -79576419 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 6 767 24 0 0 0 chr15 23918673 23918697 -79576277 + AT_rich Low_complexity Low_complexity 1 24 0 6 767 308 329 118 19 chr15 23918711 23918872 -79576102 - ORR1D2 LTR MaLR -162 208 32 6 767 2844 268 3 44 chr15 23919160 23919864 -79575110 - Lx5 LINE L1 -9 7041 6367 6 767 8029 76 6 0 chr15 23920030 23921119 -79573855 - L1_Mm LINE L1 -1977 3906 2811 6 767 529 197 154 0 chr15 23921248 23921365 -79573609 + RLTR11A LTR ERVK 1 135 -393 6 767 22 0 0 0 chr15 23922310 23922332 -79572642 + AT_rich Low_complexity Low_complexity 1 22 0 6 767 526 203 99 20 chr15 23922437 23922638 -79572336 - Lx9 LINE L1 -1 7643 7427 6 767 295 300 93 25 chr15 23924236 23924557 -79570417 - L1M4 LINE L1 -4874 1668 1326 6 767 1045 100 19 0 chr15 23924557 23924717 -79570257 + L1Md_T LINE L1 6420 6582 0 6 767 408 265 38 38 chr15 23925084 23925241 -79569733 + Lx9 LINE L1 7289 7445 -199 6 767 2067 247 130 56 chr15 23925347 23925763 -79569211 + L1_Rod LINE L1 3852 4340 -1507 6 767 369 0 0 0 chr15 23925763 23925804 -79569170 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 767 2067 247 130 56 chr15 23925804 23926213 -79568761 + L1_Rod LINE L1 4341 4747 -1100 6 767 5613 89 35 6 chr15 23926213 23927016 -79567958 + L1_Mus3 LINE L1 5808 6633 -5 6 767 2067 247 130 56 chr15 23927016 23927172 -79567802 + L1_Rod LINE L1 4748 4943 -904 6 767 207 0 0 0 chr15 23927172 23927195 -79567779 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 767 2067 247 130 56 chr15 23927195 23927381 -79567593 + L1_Rod LINE L1 4944 5121 -726 6 767 215 31 31 0 chr15 23927381 23927413 -79567561 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 6 767 2067 247 130 56 chr15 23927413 23927456 -79567518 + L1_Rod LINE L1 5122 5154 -693 6 767 475 259 74 0 chr15 23927469 23927685 -79567289 + Lx9 LINE L1 7411 7642 -2 6 767 6603 132 66 16 chr15 23928318 23929327 -79565647 - Lx3A LINE L1 -6 6975 5913 6 767 396 59 0 0 chr15 23929327 23929378 -79565596 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 6 767 6603 132 66 16 chr15 23929378 23929495 -79565479 - Lx3A LINE L1 -1069 5912 5793 6 767 1621 158 35 62 chr15 23930444 23930782 -79564192 + ORR1A4 LTR MaLR 1 329 0 6 767 308 33 65 16 chr15 23930990 23931052 -79563922 + (CAAAA)n Simple_repeat Simple_repeat 2 66 0 6 767 186 43 0 0 chr15 23931260 23931283 -79563691 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 767 473 312 84 5 chr15 23931440 23931630 -79563344 + RMER15 LTR ERVL 355 559 -16 6 767 4349 180 46 36 chr15 23931658 23932575 -79562399 - L1_Mur1 LINE L1 -2 5884 4959 6 767 751 166 4 142 chr15 23932585 23932810 -79562164 - L1_Mur1 LINE L1 -1148 4729 4536 6 767 1049 103 17 7 chr15 23933003 23933300 -79561674 + (CA)n Simple_repeat Simple_repeat 1 300 0 6 767 294 275 56 42 chr15 23933443 23933561 -79561413 - MER57F LTR ERV1 -130 306 185 6 767 1904 191 26 0 chr15 23933561 23933943 -79561031 + ORR1B1 LTR MaLR 1 392 -2 6 767 294 275 56 42 chr15 23933943 23933968 -79561006 - MER57F LTR ERV1 -252 184 161 6 767 356 292 84 31 chr15 23934706 23934932 -79560042 - HAL1b LINE L1 -1212 797 560 6 767 731 102 11 48 chr15 23935276 23935462 -79559512 + (TA)n Simple_repeat Simple_repeat 1 179 0 6 767 414 85 0 0 chr15 23935494 23935553 -79559421 + (GA)n Simple_repeat Simple_repeat 2 60 0 6 767 22 0 0 0 chr15 23935861 23935883 -79559091 + AT_rich Low_complexity Low_complexity 1 22 0 6 767 584 315 80 26 chr15 23936037 23936350 -79558624 + Lx8 LINE L1 6184 6513 -960 6 767 639 152 0 0 chr15 23936511 23936656 -79558318 + GA-rich Low_complexity Low_complexity 2 146 0 6 767 677 12 12 0 chr15 23936659 23936741 -79558233 + (GGAGAA)n Simple_repeat Simple_repeat 3 85 0 6 767 274 253 23 11 chr15 23936774 23936862 -79558112 + RLTR15 LTR ERVK 180 268 -91 6 767 341 318 47 0 chr15 23936958 23937065 -79557909 + Lx8 LINE L1 6623 6734 -739 6 767 486 313 79 12 chr15 23937076 23937328 -79557646 + Lx8 LINE L1 6801 7069 -404 6 767 21 0 0 0 chr15 23937522 23937543 -79557431 + AT_rich Low_complexity Low_complexity 1 21 0 6 767 8150 40 1 1 chr15 23937742 23938728 -79556246 + L1Md_F2 LINE L1 5594 6579 -3 6 767 21 36 0 0 chr15 23938766 23938794 -79556180 + AT_rich Low_complexity Low_complexity 1 28 0 6 767 694 250 32 5 chr15 23938894 23939083 -79555891 - Lx9 LINE L1 -168 7476 7283 6 767 300 341 52 100 chr15 23939445 23939676 -79555298 - MLT-int LTR MaLR -72 1663 1444 6 767 486 0 0 0 chr15 23940758 23940812 -79554162 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 6 767 1595 185 93 15 chr15 23941214 23941548 -79553426 - ORR1B1 LTR MaLR 0 394 35 6 767 3325 174 5 126 chr15 23941550 23942334 -79552640 - ORR1B1-int LTR MaLR 0 1963 1275 6 767 816 111 0 0 chr15 23942482 23942608 -79552366 + (GAAA)n Simple_repeat Simple_repeat 3 128 0 6 767 497 92 0 13 chr15 23942608 23942685 -79552289 + (GGAAA)n Simple_repeat Simple_repeat 5 80 0 6 767 812 96 12 77 chr15 23942989 23943159 -79551815 - L1_Mus4 LINE L1 -2 6634 6476 6 767 4048 231 57 57 chr15 23943159 23944428 -79550546 - ORR1B1-int LTR MaLR -694 1269 1 6 767 1277 231 28 46 chr15 23944432 23944759 -79550215 - ORR1B1 LTR MaLR -8 321 1 6 767 3254 194 33 40 chr15 23944857 23945615 -79549359 - L1_Mur2 LINE L1 -3314 2563 1811 6 767 24 0 0 0 chr15 23947734 23947758 -79547216 + AT_rich Low_complexity Low_complexity 1 24 0 6 767 285 151 0 0 chr15 23948635 23948688 -79546286 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 767 810 83 0 0 chr15 23949176 23949296 -79545678 + (GGAA)n Simple_repeat Simple_repeat 3 122 0 6 767 276 185 0 0 chr15 23949626 23949680 -79545294 + T-rich Low_complexity Low_complexity 1 54 0 6 767 453 50 0 0 chr15 23951423 23951483 -79543491 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 767 1471 149 20 8 chr15 23951559 23951810 -79543164 - Lx3B LINE L1 -4 6969 6716 6 767 239 220 0 0 chr15 23952605 23952655 -79542319 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 767 450 53 0 0 chr15 23952774 23952831 -79542143 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 767 483 224 150 16 chr15 23953242 23953369 -79541605 - B1_Mur1 SINE Alu -4 145 2 6 767 1137 107 35 0 chr15 23953454 23953623 -79541351 + B2_Mm2 SINE B2 5 179 -16 6 767 585 42 0 0 chr15 23953623 23953695 -79541279 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 6 767 495 0 0 0 chr15 23954299 23954354 -79540620 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 6 767 816 155 2 23 chr15 23954354 23954500 -79540474 - B1_Mus1 SINE Alu -3 145 2 6 767 293 185 17 41 chr15 23954465 23954552 -79540422 + B1_Mm SINE Alu 1 142 -5 6 767 5025 131 44 15 chr15 23955033 23955903 -79539071 - RMER17A2 LTR ERVK -11 895 1 6 767 22 80 0 0 chr15 23956669 23956719 -79538255 + AT_rich Low_complexity Low_complexity 1 50 0 6 767 650 300 69 27 chr15 23956751 23957011 -79537963 + Lx9 LINE L1 7072 7342 -302 6 767 5906 157 56 11 chr15 23957110 23958601 -79536373 - Lx LINE L1 -6 6648 5099 6 767 20772 160 39 68 chr15 23958603 23965038 -79529936 - L1_Mus3 LINE L1 0 6638 419 6 767 245 206 65 11 chr15 23965042 23965135 -79529839 + Lx9 LINE L1 7511 7608 -36 6 767 38 22 0 0 chr15 23965371 23965416 -79529558 + AT_rich Low_complexity Low_complexity 1 45 0 6 767 21 0 0 0 chr15 23965583 23965604 -79529370 + AT_rich Low_complexity Low_complexity 1 21 0 6 767 195 0 56 28 chr15 23965668 23965704 -79529270 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 6 767 2132 178 12 8 chr15 23966563 23966965 -79528009 + Lx3B LINE L1 6563 6966 -7 6 767 273 98 0 0 chr15 23966974 23967015 -79527959 + (TAA)n Simple_repeat Simple_repeat 2 42 0 6 767 1704 330 78 20 chr15 23967330 23968381 -79526593 + Lx9 LINE L1 6484 7595 -49 6 767 23 0 0 0 chr15 23968884 23968907 -79526067 + AT_rich Low_complexity Low_complexity 1 23 0 6 767 383 232 222 2 chr15 23969206 23969346 -79525628 + B3A SINE B2 1 169 -47 6 767 279 0 0 0 chr15 23969438 23969469 -79525505 + (ATTG)n Simple_repeat Simple_repeat 1 31 0 6 767 1614 278 137 19 chr15 23969807 23970553 -79524421 + RCHARR1 DNA MER1_type 134 967 -7 6 767 279 0 0 0 chr15 23970573 23970604 -79524370 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 767 455 268 28 44 chr15 23971369 23971549 -79523425 - L1_Rod LINE L1 -2418 3429 3253 6 767 25 0 0 0 chr15 23971804 23971829 -79523145 + AT_rich Low_complexity Low_complexity 1 25 0 6 767 577 366 40 68 chr15 23972280 23972752 -79522222 - Lx8 LINE L1 -93 7380 6922 6 767 516 307 288 16 chr15 23972984 23973353 -79521621 + RMER20B LTR ERVK 123 596 -31 7 767 189 0 0 0 chr15 23973474 23973495 -79521479 + (TTA)n Simple_repeat Simple_repeat 1 21 0 7 767 1601 109 8 12 chr15 23973495 23973746 -79521228 - L1_Mus3 LINE L1 -16 6622 6373 7 767 381 364 76 11 chr15 23973749 23974024 -79520950 + Lx8 LINE L1 6633 6925 -548 7 767 683 276 28 19 chr15 23974024 23974238 -79520736 + B3 SINE B2 1 216 0 7 767 226 167 93 0 chr15 23974331 23974385 -79520589 + (TATATG)n Simple_repeat Simple_repeat 6 64 0 7 767 385 331 26 39 chr15 23974473 23974627 -79520347 - B4A SINE B4 -140 152 1 7 767 353 285 104 26 chr15 23975130 23975293 -79519681 - MTEa LTR MaLR -3 376 211 7 767 285 265 49 39 chr15 23975438 23975540 -79519434 - B4 SINE B4 -15 277 175 7 767 353 282 62 14 chr15 23975603 23975747 -79519227 + L1MC LINE L1 3080 3230 -2916 7 767 25 0 0 0 chr15 23975748 23975773 -79519201 + AT_rich Low_complexity Low_complexity 1 25 0 7 767 1821 250 86 17 chr15 23976088 23976678 -79518296 - Lx9 LINE L1 -1 7643 7013 7 767 289 259 0 34 chr15 23976681 23976769 -79518205 + Lx9 LINE L1 6916 7000 -644 7 767 279 0 0 0 chr15 23976873 23976904 -79518070 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 7 767 314 297 93 29 chr15 23976950 23977325 -79517649 - L1M2 LINE L1 -825 5318 4920 7 767 2615 144 48 57 chr15 23977352 23978114 -79516860 - L1_Mus1 LINE L1 -7 6631 5879 7 767 6164 122 8 0 chr15 23978115 23979124 -79515850 - Lx LINE L1 -173 6481 5466 7 767 3655 184 12 19 chr15 23979124 23979871 -79515103 + L1_Mur2 LINE L1 4630 5371 -506 7 767 226 290 99 73 chr15 23979890 23980303 -79514671 - L1M2 LINE L1 -1318 4825 4402 7 767 437 308 14 0 chr15 23980511 23980657 -79514317 + Lx9 LINE L1 7251 7398 -246 7 767 465 211 0 42 chr15 23980955 23981074 -79513900 + Lx9 LINE L1 7518 7631 -13 7 767 305 346 180 45 chr15 23981093 23981520 -79513454 - L1M2 LINE L1 -1932 4211 3727 7 767 475 302 60 55 chr15 23981565 23981992 -79512982 + L1MA4 LINE L1 5688 6114 -177 7 767 524 310 75 0 chr15 23982330 23982530 -79512444 + B3 SINE B2 2 216 0 7 767 1278 211 40 46 chr15 23983896 23984219 -79510755 + ORR1B1 LTR MaLR 1 321 -8 7 767 1607 151 270 8 chr15 23984223 23984590 -79510384 + ORR1B1-int LTR MaLR 1 463 -1500 7 767 1775 163 174 8 chr15 23984596 23984986 -79509988 + Lx3A LINE L1 6524 6978 -3 7 767 609 110 0 0 chr15 23984991 23985082 -79509892 + (CAGA)n Simple_repeat Simple_repeat 2 92 0 7 95 5965 192 39 126 chr15 23985086 23986745 -79508229 + ORR1B1-int LTR MaLR 450 1963 0 7 768 1610 175 20 84 chr15 23986745 23987122 -79507852 + ORR1B1 LTR MaLR 1 386 -8 7 768 3306 83 47 12 chr15 23987438 23987927 -79507047 - L1Md_F2 LINE L1 0 6582 6077 7 768 312 229 0 0 chr15 23988388 23988471 -79506503 + (TG)n Simple_repeat Simple_repeat 1 83 0 7 768 287 355 57 54 chr15 23988531 23988811 -79506163 - B4A SINE B4 -9 283 3 7 768 372 196 67 86 chr15 23989462 23989596 -79505378 + L1_Mur2 LINE L1 883 1007 -6079 7 768 16809 198 29 41 chr15 23989609 23990279 -79504695 + L1_Mur2 LINE L1 1355 2044 -3833 7 768 387 0 0 0 chr15 23990279 23990322 -79504652 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 768 16809 198 29 41 chr15 23990322 23991836 -79503138 + L1_Mur2 LINE L1 2045 3471 -2406 7 768 198 0 0 0 chr15 23991836 23991858 -79503116 + (CAA)n Simple_repeat Simple_repeat 3 24 0 7 768 16809 198 29 41 chr15 23991858 23992652 -79502322 + L1_Mur2 LINE L1 3472 4287 -1590 7 768 1635 32 0 0 chr15 23992652 23992841 -79502133 - B2_Mm1a SINE B2 -3 190 2 7 768 16809 198 29 41 chr15 23992841 23994029 -79500945 + L1_Mur2 LINE L1 4288 5471 -406 7 768 39127 30 5 2 chr15 23994028 24000000 -79494974 + L1Md_A LINE L1 343 6339 -243 7 768 1962 50 4 0 chr15 24000000 24000242 -79494732 + L1Md_T LINE L1 6340 6582 0 1 768 5406 230 36 5 chr15 24000242 24001636 -79493338 + Lx5 LINE L1 5459 6907 -143 2 768 1008 93 0 0 chr15 24001958 24002097 -79492877 - B1_Mus1 SINE Alu -2 146 8 3 768 232 149 21 21 chr15 24003008 24003056 -79491918 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 768 243 140 0 0 chr15 24003214 24003264 -79491710 + (CAGAGA)n Simple_repeat Simple_repeat 2 51 0 5 768 579 291 25 31 chr15 24003297 24003460 -79491514 - B3A SINE B2 -35 163 2 6 768 464 87 0 12 chr15 24004312 24004387 -79490587 + (TC)n Simple_repeat Simple_repeat 1 74 0 7 768 333 0 0 0 chr15 24004387 24004424 -79490550 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 768 464 87 0 12 chr15 24004424 24004430 -79490544 + (TC)n Simple_repeat Simple_repeat 1 6 0 9 768 255 152 0 0 chr15 24004574 24004620 -79490354 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 768 189 107 0 0 chr15 24005488 24005516 -79489458 + (T)n Simple_repeat Simple_repeat 1 28 0 1 768 2662 164 83 6 chr15 24006239 24006730 -79488244 + Lx3B LINE L1 6445 6973 0 1 768 221 229 12 24 chr15 24006732 24006817 -79488157 + A-rich Low_complexity Low_complexity 2 85 0 1 768 4775 198 46 38 chr15 24006823 24008019 -79486955 + L1_Mur2 LINE L1 1442 2647 -3230 1 768 1195 240 63 29 chr15 24007999 24008377 -79486597 + Lx5 LINE L1 5751 6141 -909 1 768 727 278 61 5 chr15 24008393 24008606 -79486368 + Lx6 LINE L1 7210 7434 -26 1 768 1451 289 64 40 chr15 24008795 24009677 -79485297 - Lx9 LINE L1 -1862 5782 4844 1 768 711 243 7 0 chr15 24009678 24009830 -79485144 - RLTR14 LTR ERV1 -227 155 3 1 768 663 161 7 110 chr15 24009850 24010004 -79484970 - RLTR14-int LTR ERV1 0 5317 5180 1 768 226 59 137 0 chr15 24011073 24011124 -79483850 - L1Md_F2 LINE L1 -1 6581 6524 1 768 8408 70 0 5 chr15 24011124 24012262 -79482712 + L1_Mm LINE L1 1682 2813 -3070 2 768 410 376 52 6 chr15 24013189 24013363 -79481611 + MER54B LTR ERVL 598 779 -14 2 768 433 155 39 0 chr15 24013669 24013772 -79481202 + CT-rich Low_complexity Low_complexity 6 112 0 2 768 523 346 122 17 chr15 24013892 24014130 -79480844 - B4A SINE B4 -26 266 4 2 768 230 39 57 38 chr15 24014498 24014551 -79480423 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 2 768 1600 33 0 23 chr15 24015635 24015851 -79479123 + L1Md_F2 LINE L1 6367 6577 -5 2 768 27 0 0 0 chr15 24016305 24016332 -79478642 + AT_rich Low_complexity Low_complexity 1 27 0 2 768 719 159 8 0 chr15 24016790 24016922 -79478052 + Lx2 LINE L1 6864 6996 -1 2 768 763 344 35 38 chr15 24017122 24017323 -79477651 + MTE2a LTR MaLR 51 253 -126 2 768 2451 39 3 16 chr15 24017323 24017640 -79477334 + L1Md_F3 LINE L1 6272 6584 0 2 768 763 344 35 38 chr15 24017640 24017755 -79477219 + MTE2a LTR MaLR 254 366 -13 2 768 282 56 0 0 chr15 24018291 24018327 -79476647 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 3 768 989 38 23 0 chr15 24018929 24019062 -79475912 - L1Md_F2 LINE L1 -3 6579 6444 3 768 342 80 0 0 chr15 24019878 24019928 -79475046 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 768 278 266 94 34 chr15 24019971 24020088 -79474886 + MLT1D LTR MaLR 379 502 -3 3 768 256 303 97 35 chr15 24020409 24020522 -79474452 + RSINE1 SINE B4 37 156 -9 3 768 777 286 30 25 chr15 24021227 24021428 -79473546 - B3 SINE B2 -5 211 10 3 768 324 136 11 22 chr15 24022590 24022680 -79472294 + (TCTCTG)n Simple_repeat Simple_repeat 2 90 0 3 768 279 0 0 0 chr15 24022683 24022714 -79472260 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 768 771 243 114 0 chr15 24023305 24023507 -79471467 + URR1B DNA MER1_type 1 225 0 3 768 341 256 149 48 chr15 24024022 24024190 -79470784 - B3 SINE B2 -6 210 26 3 768 402 85 0 0 chr15 24024861 24024920 -79470054 + (TG)n Simple_repeat Simple_repeat 1 59 0 4 768 690 167 0 0 chr15 24025163 24025343 -79469631 + GA-rich Low_complexity Low_complexity 1 180 0 4 768 342 164 0 0 chr15 24025343 24025398 -79469576 + (CAGAGA)n Simple_repeat Simple_repeat 5 59 0 4 768 288 373 11 5 chr15 24026281 24026391 -79468583 + PB1D7 SINE Alu 1 111 -9 4 768 22 56 0 0 chr15 24026603 24026639 -79468335 + AT_rich Low_complexity Low_complexity 1 36 0 4 768 26 0 0 0 chr15 24027008 24027034 -79467940 + AT_rich Low_complexity Low_complexity 1 26 0 4 768 975 129 0 0 chr15 24027538 24027693 -79467281 + (CAGA)n Simple_repeat Simple_repeat 2 156 0 4 768 488 382 5 20 chr15 24027739 24027934 -79467040 + B3A SINE B2 6 197 -1 4 768 704 282 65 22 chr15 24028397 24028629 -79466345 - Lx7 LINE L1 -445 7251 7010 4 768 626 286 21 21 chr15 24028609 24028852 -79466122 - Lx7 LINE L1 -1382 6314 6072 4 768 349 186 24 33 chr15 24028859 24028958 -79466016 - MTC LTR MaLR -1 418 323 4 768 570 259 22 11 chr15 24028958 24029138 -79465836 - Lx7 LINE L1 -897 4983 4802 4 768 25 0 0 0 chr15 24030989 24031014 -79463960 + AT_rich Low_complexity Low_complexity 1 25 0 5 768 643 153 0 0 chr15 24031046 24031144 -79463830 + L1Md_F2 LINE L1 218 315 -6323 5 768 30048 89 13 3 chr15 24031140 24036041 -79458933 + L1Md_F2 LINE L1 639 5585 -298 5 768 6773 88 25 5 chr15 24036044 24037015 -79457959 + L1Md_F2 LINE L1 5589 6578 -4 5 768 2463 177 15 4 chr15 24037406 24037887 -79457087 - L1_Mur1 LINE L1 -2760 3126 2641 5 768 2711 221 53 5 chr15 24037900 24038508 -79456466 + Lx2B LINE L1 6354 6990 -10 5 768 800 200 129 5 chr15 24038606 24038807 -79456167 - URR1A DNA MER1_type 0 226 1 5 768 4328 71 2 12 chr15 24040154 24040737 -79454237 + L1Md_F2 LINE L1 5997 6573 -9 5 768 1342 189 148 25 chr15 24040744 24040932 -79454042 + RMER17C LTR ERVK 2 184 -226 5 768 650 13 13 0 chr15 24040932 24041011 -79453963 + (TC)n Simple_repeat Simple_repeat 1 80 0 5 768 1342 189 148 25 chr15 24041011 24041186 -79453788 + RMER17C LTR ERVK 185 409 -1 5 768 234 318 0 57 chr15 24041470 24041540 -79453434 + ID4 SINE ID 17 82 -1 5 768 669 312 131 21 chr15 24041665 24042002 -79452972 - MTE2a LTR MaLR 0 379 6 5 768 5430 108 58 6 chr15 24042474 24043077 -79451897 - Lx3_Mus LINE L1 -452 6557 5921 6 768 216 0 0 0 chr15 24043077 24043101 -79451873 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 6 768 5430 108 58 6 chr15 24043101 24043357 -79451617 - Lx3_Mus LINE L1 -1089 5920 5655 6 768 2424 96 14 0 chr15 24043356 24043711 -79451263 + L1_Mur1 LINE L1 785 1144 -5838 6 768 191 103 0 25 chr15 24044115 24044155 -79450819 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 6 768 617 91 0 18 chr15 24045441 24045553 -79449421 + (CAGAGA)n Simple_repeat Simple_repeat 6 115 0 6 768 259 121 35 0 chr15 24045637 24045695 -79449279 + (TA)n Simple_repeat Simple_repeat 2 61 0 6 768 234 0 0 0 chr15 24046806 24046832 -79448142 + (TC)n Simple_repeat Simple_repeat 2 27 0 6 768 261 0 0 0 chr15 24046832 24046860 -79448114 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 768 22 88 0 0 chr15 24047303 24047360 -79447614 + AT_rich Low_complexity Low_complexity 1 57 0 6 768 214 233 0 32 chr15 24047517 24047610 -79447364 + (CATA)n Simple_repeat Simple_repeat 3 92 0 6 768 205 301 0 14 chr15 24047611 24047685 -79447289 + (CA)n Simple_repeat Simple_repeat 2 74 0 7 768 1644 210 65 3 chr15 24047719 24048044 -79446930 + ORR1B1 LTR MaLR 42 386 -8 7 768 21 0 0 0 chr15 24048970 24048991 -79445983 + AT_rich Low_complexity Low_complexity 1 21 0 7 768 22 0 0 0 chr15 24049546 24049568 -79445406 + AT_rich Low_complexity Low_complexity 1 22 0 7 768 2502 174 45 5 chr15 24049826 24050329 -79444645 + Lx2A1 LINE L1 6051 7002 -6 7 768 599 205 6 104 chr15 24050432 24050595 -79444379 - B1_Mur3 SINE Alu -2 147 1 7 768 2116 114 6 9 chr15 24050727 24051047 -79443927 - ORR1A2 LTR MaLR -8 319 1 7 768 427 99 0 0 chr15 24051909 24051973 -79443001 + L1Md_F2 LINE L1 5530 5616 -573 7 768 7972 44 3 9 chr15 24051973 24052973 -79442001 + L1Md_F2 LINE L1 5588 6581 -1 7 768 1164 265 72 23 chr15 24053197 24053583 -79441391 + MTD LTR MaLR 10 414 -5 7 768 1107 243 70 12 chr15 24055597 24055926 -79439048 + Lx7 LINE L1 5818 6165 -1531 7 768 669 58 0 0 chr15 24055928 24056014 -79438960 + (TATATG)n Simple_repeat Simple_repeat 1 86 0 8 768 2538 260 53 13 chr15 24056040 24056721 -79438253 + Lx7 LINE L1 6252 6959 -737 7 768 1662 85 4 9 chr15 24056748 24056973 -79438001 - L1Md_F2 LINE L1 -169 5714 5491 8 768 6629 70 6 2 chr15 24056973 24057852 -79437122 + L1Md_F2 LINE L1 5698 6579 -3 8 768 379 186 54 14 chr15 24058591 24058738 -79436236 + (TA)n Simple_repeat Simple_repeat 2 154 0 8 768 188 122 0 24 chr15 24058811 24058853 -79436121 + (TA)n Simple_repeat Simple_repeat 2 42 0 8 768 726 102 0 0 chr15 24058856 24058983 -79435991 + (TG)n Simple_repeat Simple_repeat 2 128 0 8 768 23 54 0 0 chr15 24060977 24061014 -79433960 + AT_rich Low_complexity Low_complexity 1 37 0 8 768 324 94 0 0 chr15 24061039 24061092 -79433882 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 768 213 39 0 0 chr15 24062029 24062055 -79432919 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 768 363 137 0 0 chr15 24062055 24062128 -79432846 + (GA)n Simple_repeat Simple_repeat 2 74 0 8 768 958 281 102 25 chr15 24062231 24062633 -79432341 - MER67C LTR ERV1 -3 708 276 8 768 1589 213 17 39 chr15 24062737 24063098 -79431876 - RLTR15 LTR ERVK -6 353 1 9 768 320 338 145 63 chr15 24063226 24063558 -79431416 + ORR1E LTR MaLR 1 359 0 9 768 1150 339 117 20 chr15 24063702 24064250 -79430724 + MTE-int LTR MaLR 661 1261 -319 9 768 724 334 75 25 chr15 24064282 24064604 -79430370 + MTEa LTR MaLR 37 374 -5 9 768 449 280 8 8 chr15 24064614 24064733 -79430241 + MTE-int LTR MaLR 1261 1379 -201 9 768 3963 59 44 0 chr15 24064761 24065266 -79429708 - L1_Mus1 LINE L1 0 6567 6041 9 768 225 210 16 31 chr15 24065314 24065378 -79429596 + (TG)n Simple_repeat Simple_repeat 2 64 0 9 768 460 361 25 37 chr15 24065384 24065545 -79429429 - RSINE1 SINE B4 -1 164 6 9 768 231 272 94 26 chr15 24065553 24065661 -79429313 + MTE-int LTR MaLR 1414 1529 -51 9 768 675 333 109 24 chr15 24065661 24065990 -79428984 + ORR1E LTR MaLR 3 359 0 9 768 213 39 0 0 chr15 24066069 24066095 -79428879 + (TC)n Simple_repeat Simple_repeat 1 26 0 9 768 324 0 0 0 chr15 24066095 24066131 -79428843 + (TA)n Simple_repeat Simple_repeat 2 37 0 9 768 333 0 0 0 chr15 24066131 24066167 -79428807 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 768 249 108 0 0 chr15 24066881 24066918 -79428056 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 768 2952 10 2 155 chr15 24066947 24067405 -79427569 + RLTR10 LTR ERVK 1 388 -2 1 768 4638 35 4 0 chr15 24067413 24067982 -79426992 + RLTR10-int LTR ERVK 34 591 -1396 1 768 2076 100 18 30 chr15 24067985 24068314 -79426660 - IAPLTR2b LTR ERVK -2 325 1 1 768 362 331 71 29 chr15 24068320 24068460 -79426514 - B3 SINE B2 -65 151 6 1 768 39 60 0 0 chr15 24069680 24069747 -79425227 + AT_rich Low_complexity Low_complexity 1 67 0 1 768 186 50 0 70 chr15 24070424 24070467 -79424507 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 1 768 981 86 14 48 chr15 24070467 24070613 -79424361 - B1_Mus2 SINE Alu -6 141 1 1 768 789 216 22 62 chr15 24072149 24072425 -79422549 + Lx9 LINE L1 7373 7637 -7 1 768 2079 186 96 73 chr15 24072448 24072969 -79422005 - RMER16 LTR ERVK 0 533 1 1 768 31 76 0 0 chr15 24073817 24073883 -79421091 + AT_rich Low_complexity Low_complexity 1 66 0 1 768 21 0 0 0 chr15 24073988 24074009 -79420965 + AT_rich Low_complexity Low_complexity 1 21 0 1 768 394 330 29 44 chr15 24074254 24074596 -79420378 - L1MC4 LINE L1 -425 7617 7281 1 768 180 0 0 0 chr15 24074628 24074648 -79420326 + (TAAAAA)n Simple_repeat Simple_repeat 4 23 0 1 768 297 208 39 0 chr15 24074757 24074834 -79420140 - Lx7 LINE L1 0 7696 7617 1 768 200 278 25 34 chr15 24074891 24075010 -79419964 + A-rich Low_complexity Low_complexity 2 119 0 1 768 297 0 0 0 chr15 24075056 24075089 -79419885 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 768 300 203 0 0 chr15 24075309 24075368 -79419606 + RLTR42-int LTR ERVK 1547 1605 -3917 1 768 887 169 6 0 chr15 24075440 24075612 -79419362 + GA-rich Low_complexity Low_complexity 2 174 0 1 768 437 261 50 7 chr15 24076181 24076320 -79418654 + L1M2 LINE L1 3967 4111 -2032 1 768 261 0 0 0 chr15 24076804 24076833 -79418141 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 768 434 356 7 0 chr15 24076833 24076968 -79418006 - RSINE1 SINE B4 -29 136 1 1 768 672 232 23 92 chr15 24077175 24077393 -79417581 - ORR1D1 LTR MaLR -171 203 1 1 768 183 232 0 0 chr15 24077681 24077737 -79417237 + GA-rich Low_complexity Low_complexity 3 58 0 1 768 1206 106 61 0 chr15 24078399 24078579 -79416395 - B2_Mm2 SINE B2 -3 192 2 1 768 24 91 0 0 chr15 24078652 24078718 -79416256 + AT_rich Low_complexity Low_complexity 1 66 0 1 768 22 56 0 0 chr15 24080568 24080604 -79414370 + AT_rich Low_complexity Low_complexity 1 36 0 1 768 186 219 0 0 chr15 24080830 24080894 -79414080 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 768 335 45 0 22 chr15 24080897 24080942 -79414032 + HAL1-3A_ME LINE L1 1977 2020 -838 1 768 354 107 0 0 chr15 24081086 24081142 -79413832 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 768 493 340 109 94 chr15 24081716 24082489 -79412485 - RMER13A LTR ERVK -63 797 14 1 768 215 103 0 25 chr15 24084593 24084633 -79410341 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 1 768 275 266 53 9 chr15 24084774 24084888 -79410086 + L1MA6 LINE L1 6063 6181 -119 1 768 1379 71 16 21 chr15 24085251 24085439 -79409535 - B2_Mm2 SINE B2 -7 188 2 1 768 2155 250 88 63 chr15 24085808 24086765 -79408209 + RMER17B LTR ERVK 1 859 -1 1 768 3754 193 50 65 chr15 24087270 24088185 -79406789 + RMER19B LTR ERVK 1 902 0 1 768 391 336 22 14 chr15 24088405 24088544 -79406430 + B4A SINE B4 135 274 -18 1 768 347 193 11 4 chr15 24089100 24089187 -79405787 + RLTR20B1 LTR ERVK 192 280 -261 1 768 429 20 0 0 chr15 24089416 24089466 -79405508 + (TTA)n Simple_repeat Simple_repeat 2 51 0 1 768 23 33 0 0 chr15 24089690 24089720 -79405254 + AT_rich Low_complexity Low_complexity 1 30 0 1 768 226 246 28 95 chr15 24089797 24090008 -79404966 - Lx7 LINE L1 -99 7597 7401 1 768 1480 251 108 12 chr15 24090031 24090549 -79404425 - Lx7 LINE L1 -969 6727 6160 1 768 244 266 47 0 chr15 24090559 24090623 -79404351 + L1_Mur3 LINE L1 5147 5213 -667 1 768 533 224 17 33 chr15 24090628 24090808 -79404166 - L1_Mur3 LINE L1 -2922 2958 2782 1 768 5298 107 47 23 chr15 24090832 24091668 -79403306 - Lx3_Mus LINE L1 -8 7001 6146 1 768 780 290 39 28 chr15 24091690 24092045 -79402929 - RLTR10D LTR ERVK 0 359 1 1 768 1197 248 91 52 chr15 24092045 24092505 -79402469 - L1_Mur3 LINE L1 -3108 2772 2295 1 768 622 349 75 26 chr15 24092524 24092789 -79402185 + B4A SINE B4 15 292 0 1 768 294 216 0 0 chr15 24092797 24092871 -79402103 + (CA)n Simple_repeat Simple_repeat 2 75 0 1 768 2612 77 61 3 chr15 24093079 24093455 -79401519 + L1_Mus2 LINE L1 6169 6566 0 1 768 1266 93 22 0 chr15 24093954 24094137 -79400837 - B2_Mm1t SINE B2 -6 187 1 1 768 247 355 67 50 chr15 24095877 24096117 -79398857 - MLT1E LTR MaLR -3 650 407 1 768 3016 147 37 79 chr15 24096324 24096922 -79398052 - Lx2B LINE L1 -8 6992 6420 1 768 4285 126 87 3 chr15 24097016 24097916 -79397058 + Lx3_Mus LINE L1 6013 6988 -21 1 768 200 35 35 0 chr15 24097916 24097945 -79397029 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 1 768 327 244 0 90 chr15 24098195 24098339 -79396635 - Lx9 LINE L1 -36 7608 7478 1 768 3019 249 50 16 chr15 24098685 24099569 -79395405 - Lx9 LINE L1 -159 7485 6572 1 768 1046 82 0 0 chr15 24100071 24100206 -79394768 + B1_Mm SINE Alu 1 135 -12 1 768 207 69 0 0 chr15 24100207 24100236 -79394738 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 768 442 0 17 17 chr15 24100241 24100300 -79394674 + (CAAAA)n Simple_repeat Simple_repeat 3 61 0 1 768 621 0 0 0 chr15 24101391 24101460 -79393514 + (GA)n Simple_repeat Simple_repeat 2 70 0 1 768 267 333 68 8 chr15 24101610 24101728 -79393246 - MLT1D LTR MaLR -367 138 14 1 768 1477 239 51 87 chr15 24102592 24103225 -79391749 + Lx7 LINE L1 7072 7681 -15 1 768 1401 72 0 11 chr15 24103229 24103412 -79391562 + B2_Mm2 SINE B2 1 181 -14 1 768 732 144 0 25 chr15 24104416 24104573 -79390401 + CT-rich Low_complexity Low_complexity 1 153 0 1 768 399 315 61 66 chr15 24104685 24104882 -79390092 - B4A SINE B4 -95 197 2 1 768 31948 83 14 6 chr15 24105318 24106650 -79388324 - L1Md_F2 LINE L1 0 6582 5244 1 768 702 92 23 0 chr15 24106650 24106780 -79388194 + (TA)n Simple_repeat Simple_repeat 2 134 0 1 768 31948 88 15 8 chr15 24106780 24106870 -79388104 - L1Md_F2 LINE L1 -640 5243 5147 1 768 5276 45 26 0 chr15 24106870 24107529 -79387445 + L1Md_T LINE L1 5907 6582 0 1 768 31948 114 25 18 chr15 24107529 24112436 -79382538 - L1Md_F2 LINE L1 -737 5146 209 1 768 1129 88 0 0 chr15 24112540 24112688 -79382286 - B1_Mus1 SINE Alu 0 148 1 1 768 3627 155 11 19 chr15 24114041 24114679 -79380295 + Lx4A LINE L1 6418 7050 -8 1 768 453 19 0 0 chr15 24114756 24114810 -79380164 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 768 886 249 141 13 chr15 24114915 24115306 -79379668 - Lx9 LINE L1 -1 7643 7203 1 768 1344 98 0 0 chr15 24115473 24115704 -79379270 - L1_Mus1 LINE L1 0 6567 6372 1 11 6291 218 31 4 chr15 24116721 24118105 -79376869 - Lx3C LINE L1 -2 6974 5553 1 769 418 329 6 99 chr15 24118583 24118755 -79376219 - B3A SINE B2 -16 182 27 1 769 1700 325 85 23 chr15 24118781 24119796 -79375178 - Lx9 LINE L1 -35 7609 6532 1 769 13442 182 102 62 chr15 24119794 24124389 -79370585 - Lx4B LINE L1 -336 6722 1232 1 769 231 360 0 0 chr15 24124390 24124465 -79370509 + B4 SINE B4 149 223 -69 1 769 1086 277 29 93 chr15 24124500 24125057 -79369917 + Lx7 LINE L1 7176 7696 0 1 769 344 22 22 0 chr15 24126047 24126092 -79368882 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 769 253 301 30 115 chr15 24126665 24126830 -79368144 - RLTR21 LTR ERVK -332 1240 1090 1 769 4225 116 33 0 chr15 24126961 24127601 -79367373 - Lx3_Mus LINE L1 -5 7004 6344 1 769 1189 49 6 53 chr15 24128968 24129139 -79365835 + L1_Mus1 LINE L1 6405 6567 0 1 769 612 213 7 32 chr15 24129473 24129628 -79365346 - Lx6 LINE L1 -9 7451 7301 1 769 2465 190 23 13 chr15 24129822 24130345 -79364629 + RLTR11A LTR ERVK 1 528 0 1 769 27 29 0 0 chr15 24130348 24130382 -79364592 + AT_rich Low_complexity Low_complexity 1 34 0 1 769 294 322 81 38 chr15 24130930 24131140 -79363834 - MLT1A LTR MaLR -2 372 154 1 769 243 114 0 0 chr15 24131147 24131191 -79363783 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1 769 329 172 11 0 chr15 24131277 24131370 -79363604 + (CA)n Simple_repeat Simple_repeat 1 94 0 1 769 1642 158 82 32 chr15 24131787 24132128 -79362846 - ORR1B1 LTR MaLR 0 394 37 1 769 4073 181 66 12 chr15 24132127 24133166 -79361808 - ORR1B1-int LTR MaLR -193 1770 964 1 769 581 241 171 8 chr15 24135384 24135635 -79359339 - ORR1B1-int LTR MaLR -988 975 684 1 769 401 290 40 31 chr15 24136568 24136792 -79358182 + L1_Mur3 LINE L1 4248 4473 -1407 1 769 433 90 39 0 chr15 24137082 24137160 -79357814 - L1Md_F2 LINE L1 0 6582 6502 1 769 759 291 96 47 chr15 24137218 24137658 -79357316 + Lx8 LINE L1 6023 6474 -999 1 769 692 334 99 38 chr15 24137644 24138148 -79356826 + Lx8 LINE L1 6661 7195 -278 1 769 76 31 0 0 chr15 24138827 24138924 -79356050 + AT_rich Low_complexity Low_complexity 1 97 0 1 769 28 29 0 0 chr15 24139204 24139239 -79355735 + AT_rich Low_complexity Low_complexity 1 35 0 1 769 189 0 0 0 chr15 24140399 24140420 -79354554 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1 769 8204 40 13 1 chr15 24140428 24141745 -79353229 - L1Md_F3 LINE L1 -15 6569 5227 1 769 246 318 17 86 chr15 24141810 24141927 -79353047 - ID_B1 SINE B4 -34 190 82 1 769 955 202 89 106 chr15 24142019 24142301 -79352673 + ORR1B1 LTR MaLR 1 277 -117 1 769 304 328 220 6 chr15 24142423 24142591 -79352383 + B3A SINE B2 1 204 -12 1 769 28 29 0 0 chr15 24143186 24143221 -79351753 + AT_rich Low_complexity Low_complexity 1 35 0 1 769 21 36 0 0 chr15 24144388 24144416 -79350558 + AT_rich Low_complexity Low_complexity 1 28 0 1 769 261 50 0 0 chr15 24144506 24144546 -79350428 - L1Md_F2 LINE L1 -12 6570 6531 2 769 34819 54 8 17 chr15 24144547 24149780 -79345194 + L1Md_A LINE L1 406 5586 -297 2 769 8203 44 0 0 chr15 24149780 24150774 -79344200 + L1Md_A LINE L1 5587 6580 -2 2 769 920 111 147 6 chr15 24150774 24150812 -79344162 - L1Md_F2 LINE L1 -38 6544 6507 2 769 189 74 0 0 chr15 24150812 24150839 -79344135 + (CCCA)n Simple_repeat Simple_repeat 3 29 0 2 769 920 111 147 6 chr15 24150839 24150963 -79344011 - L1Md_F2 LINE L1 -76 6506 6361 2 769 519 17 0 0 chr15 24151198 24151258 -79343716 + (GA)n Simple_repeat Simple_repeat 1 60 0 2 769 234 305 10 10 chr15 24151260 24151356 -79343618 + GA-rich Low_complexity Low_complexity 2 97 0 2 769 22 0 0 0 chr15 24151774 24151796 -79343178 + AT_rich Low_complexity Low_complexity 1 22 0 2 769 1553 135 12 0 chr15 24153293 24153537 -79341437 - Lx2B LINE L1 -430 6570 6324 2 769 1600 153 15 0 chr15 24153534 24153796 -79341178 + Lx2 LINE L1 6608 6873 -124 2 769 275 200 0 0 chr15 24153876 24153921 -79341053 + polypurine Low_complexity Low_complexity 5 49 0 2 769 445 263 26 0 chr15 24154160 24154274 -79340700 + B3 SINE B2 45 161 -55 2 769 2452 87 24 0 chr15 24154279 24154613 -79340361 + L1_Mus3 LINE L1 6023 6364 -274 2 769 495 0 0 0 chr15 24155150 24155205 -79339769 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 769 216 344 229 0 chr15 24155206 24155337 -79339637 - B3A SINE B2 -34 164 4 2 769 2240 91 0 9 chr15 24155790 24156113 -79338861 - L1_Mus4 LINE L1 -6 6630 6311 2 769 316 237 43 0 chr15 24157329 24157422 -79337552 + L1MA6 LINE L1 5902 5998 -302 2 769 527 197 536 5 chr15 24157460 24157652 -79337322 - ORR1C2 LTR MaLR -11 373 80 2 769 933 181 5 20 chr15 24157652 24157849 -79337125 + Lx2B LINE L1 6807 7000 0 2 769 32 26 0 0 chr15 24157856 24157895 -79337079 + AT_rich Low_complexity Low_complexity 1 39 0 2 769 411 186 14 0 chr15 24157897 24157967 -79337007 - ORR1C2 LTR MaLR -313 71 1 2 769 2072 118 67 0 chr15 24158696 24159026 -79335948 + Lx2 LINE L1 6646 6997 0 2 769 1390 254 62 8 chr15 24159968 24160337 -79334637 + MTD LTR MaLR 2 390 -29 2 769 288 120 0 20 chr15 24161261 24161312 -79333662 - Lx3A LINE L1 -7 6974 6925 2 769 989 117 14 0 chr15 24161566 24161711 -79333263 + B1_Mus2 SINE Alu 1 147 0 2 769 5676 81 2 2 chr15 24161790 24162556 -79332418 - L1_Mus1 LINE L1 -239 6328 5588 2 769 1508 78 0 5 chr15 24162556 24162763 -79332211 + L1_Mus1 LINE L1 6361 6566 -1 2 769 379 276 117 62 chr15 24162886 24163160 -79331814 - Charlie1a DNA MER1_type -639 816 528 2 769 3472 255 63 22 chr15 24164901 24165816 -79329158 + Lx6 LINE L1 6494 7446 -14 2 769 1800 249 64 33 chr15 24165814 24166425 -79328549 - Lx7 LINE L1 -266 7430 6801 2 769 499 248 82 8 chr15 24166836 24166958 -79328016 + B3A SINE B2 3 133 -65 2 769 2127 104 67 3 chr15 24167004 24167332 -79327642 - L1_Mus3 LINE L1 0 6638 6290 2 769 13641 120 61 21 chr15 24167332 24170299 -79324675 - L1VL2 LINE L1 -300 3398 214 2 769 450 308 124 50 chr15 24172010 24172348 -79322626 + RMER5 LTR ERV1 163 525 -9 2 769 231 133 22 0 chr15 24172349 24172394 -79322580 + T-rich Low_complexity Low_complexity 1 46 0 2 769 453 50 0 0 chr15 24173848 24173908 -79321066 + (CATA)n Simple_repeat Simple_repeat 4 63 0 2 769 24 32 0 0 chr15 24173998 24174029 -79320945 + AT_rich Low_complexity Low_complexity 1 31 0 2 769 824 260 60 47 chr15 24174267 24174649 -79320325 + MER67C LTR ERV1 5 419 -292 2 769 255 275 49 90 chr15 24174986 24175130 -79319844 + Charlie5 DNA MER1_type 2337 2474 -150 2 769 183 42 0 0 chr15 24175214 24175238 -79319736 + (TTG)n Simple_repeat Simple_repeat 2 25 0 2 769 1475 371 39 18 chr15 24175341 24176275 -79318699 - Lx8 LINE L1 -136 7337 6385 2 769 2698 58 0 20 chr15 24176528 24176881 -79318093 - ORR1A1 LTR MaLR 0 346 1 2 769 189 0 0 0 chr15 24176952 24176973 -79318001 + (T)n Simple_repeat Simple_repeat 1 21 0 2 769 1905 162 148 22 chr15 24177165 24177797 -79317177 - Lx2B LINE L1 -3 6997 6286 2 769 286 259 0 0 chr15 24178093 24178178 -79316796 + CT-rich Low_complexity Low_complexity 2 86 0 2 769 1101 68 11 6 chr15 24178187 24178365 -79316609 + (TC)n Simple_repeat Simple_repeat 2 180 0 2 769 24 53 0 0 chr15 24178945 24178983 -79315991 + AT_rich Low_complexity Low_complexity 1 38 0 2 769 236 246 31 0 chr15 24179795 24179860 -79315114 + T-rich Low_complexity Low_complexity 2 68 0 2 769 277 274 71 43 chr15 24180330 24180471 -79314503 + MurSatRep1 Unknown Unknown 111 255 -1882 2 769 431 145 0 12 chr15 24180561 24180645 -79314329 + (CA)n Simple_repeat Simple_repeat 1 83 0 2 769 378 272 75 70 chr15 24180665 24180851 -79314123 - B3A SINE B2 -10 188 2 2 769 21 0 0 0 chr15 24180913 24180934 -79314040 + AT_rich Low_complexity Low_complexity 1 21 0 2 769 37 39 0 0 chr15 24181538 24181589 -79313385 + AT_rich Low_complexity Low_complexity 1 51 0 2 769 27 49 0 0 chr15 24181649 24181690 -79313284 + AT_rich Low_complexity Low_complexity 1 41 0 2 769 1187 102 0 11 chr15 24181894 24182082 -79312892 - L1Md_F2 LINE L1 0 6582 6397 2 769 24 0 0 0 chr15 24182208 24182232 -79312742 + AT_rich Low_complexity Low_complexity 1 24 0 2 769 594 41 0 0 chr15 24182252 24182325 -79312649 + (TA)n Simple_repeat Simple_repeat 1 73 0 2 769 1489 150 109 89 chr15 24182411 24182761 -79312213 - ORR1B1 LTR MaLR 0 394 38 2 769 267 103 0 0 chr15 24183000 24183039 -79311935 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 769 307 270 78 11 chr15 24183102 24183192 -79311782 - B4 SINE B4 -8 284 189 2 769 381 22 0 0 chr15 24183838 24183884 -79311090 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 769 21 0 0 0 chr15 24184159 24184180 -79310794 + AT_rich Low_complexity Low_complexity 1 21 0 2 769 1520 214 123 70 chr15 24184184 24184687 -79310287 - RLTR20B3 LTR ERVK -43 534 5 2 769 446 365 31 52 chr15 24186019 24186426 -79308548 + MLT1C LTR MaLR 3 467 0 2 769 7117 86 42 3 chr15 24188434 24189436 -79305538 - L1_Mus3 LINE L1 0 6638 5598 2 769 261 244 109 70 chr15 24189863 24189991 -79304983 + MT2B LTR ERVL 146 278 -323 2 769 574 172 58 33 chr15 24189892 24190012 -79304962 + B1_Mur3 SINE Alu 21 143 -6 2 769 541 237 14 43 chr15 24191290 24191431 -79303543 + Lx8 LINE L1 6706 6842 -631 2 769 291 28 0 0 chr15 24191709 24191745 -79303229 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 769 198 150 0 0 chr15 24191807 24191847 -79303127 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 769 290 382 81 48 chr15 24192125 24192521 -79302453 + LTR79 LTR ERVL 65 473 -54 2 769 3338 35 5 0 chr15 24192857 24193251 -79301723 + MTA_Mm LTR MaLR 1 396 0 2 769 1535 96 0 21 chr15 24194085 24194320 -79300654 + L1_Mm LINE L1 3906 4135 -1748 2 769 1823 91 0 4 chr15 24194301 24194554 -79300420 + L1_Mm LINE L1 4448 4699 -1184 2 769 2202 54 4 0 chr15 24194550 24194826 -79300148 + L1_Mus1 LINE L1 6110 6386 -181 2 769 948 221 14 24 chr15 24194835 24195044 -79299930 - Lx5 LINE L1 -89 6961 6755 2 769 254 355 43 11 chr15 24195044 24195138 -79299836 - B3 SINE B2 -21 195 99 2 769 186 43 0 0 chr15 24195200 24195223 -79299751 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2 769 1150 92 6 6 chr15 24195333 24195508 -79299466 + (GAGAA)n Simple_repeat Simple_repeat 4 178 0 2 769 21 0 0 0 chr15 24195511 24195532 -79299442 + AT_rich Low_complexity Low_complexity 1 21 0 2 769 404 333 33 0 chr15 24195728 24195848 -79299126 - ID_B1 SINE B4 -11 213 90 2 769 968 43 35 0 chr15 24195969 24196110 -79298864 + (TTTC)n Simple_repeat Simple_repeat 4 149 0 2 769 1126 52 0 0 chr15 24196110 24196245 -79298729 - B1_Mm SINE Alu -12 135 1 2 769 1460 243 95 7 chr15 24197001 24197423 -79297551 + MT2A LTR ERVL 75 533 0 2 769 342 323 0 10 chr15 24198429 24198529 -79296445 + ORR1E LTR MaLR 1 99 -260 2 769 815 78 9 0 chr15 24198532 24198648 -79296326 + (TTCTC)n Simple_repeat Simple_repeat 3 119 0 2 769 1361 56 6 0 chr15 24198655 24198834 -79296140 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 2 769 554 113 0 10 chr15 24198834 24198926 -79296048 + (TCCCC)n Simple_repeat Simple_repeat 4 95 0 2 769 222 37 0 0 chr15 24198920 24198947 -79296027 + (TC)n Simple_repeat Simple_repeat 2 28 0 2 769 366 295 11 0 chr15 24198947 24199042 -79295932 + ORR1E LTR MaLR 262 357 -2 2 769 694 181 7 7 chr15 24199847 24199997 -79294977 + GA-rich Low_complexity Low_complexity 3 152 0 2 769 6266 61 20 2 chr15 24199997 24200953 -79294021 + L1Md_F2 LINE L1 5739 6582 0 2 769 4641 264 82 21 chr15 24201473 24201624 -79293350 - Lx6 LINE L1 -8 7452 7300 2 769 432 0 0 0 chr15 24201624 24201672 -79293302 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 2 769 4641 241 91 17 chr15 24201672 24203701 -79291273 - Lx6 LINE L1 -161 7299 5097 2 769 387 312 165 16 chr15 24205648 24205902 -79289072 + B4A SINE B4 1 292 0 2 769 317 70 0 0 chr15 24206057 24206100 -79288874 - RLTR26 LTR ERVK 0 642 600 2 769 251 150 131 16 chr15 24206077 24206138 -79288836 - RMER17B LTR ERVK -890 68 1 2 769 366 316 29 19 chr15 24206776 24206986 -79287988 - L1MA4 LINE L1 -364 5936 5716 2 769 1214 349 67 64 chr15 24206976 24207884 -79287090 + Lx8 LINE L1 6480 7390 -83 2 769 501 62 0 0 chr15 24207935 24208000 -79286974 + (TA)n Simple_repeat Simple_repeat 2 66 0 2 769 2533 59 16 3 chr15 24208000 24208322 -79286652 - IAPLTR2b LTR ERVK -1 326 1 2 769 218 189 0 0 chr15 24208323 24208360 -79286614 + (TATATG)n Simple_repeat Simple_repeat 6 42 0 2 769 422 0 38 0 chr15 24208362 24208415 -79286559 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 2 769 2006 201 71 8 chr15 24208842 24209238 -79285736 + MTC LTR MaLR 1 421 0 2 769 27 0 0 0 chr15 24209659 24209686 -79285288 + AT_rich Low_complexity Low_complexity 1 27 0 2 769 198 174 0 0 chr15 24210928 24210974 -79284000 + CT-rich Low_complexity Low_complexity 1 46 0 2 769 498 83 0 0 chr15 24210977 24211049 -79283925 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 769 1008 314 19 84 chr15 24211277 24211656 -79283318 - MTE2b LTR MaLR -23 356 3 3 769 1005 257 45 0 chr15 24211690 24211935 -79283039 - RMER1B Other Other -156 910 655 3 769 240 35 0 0 chr15 24212080 24212109 -79282865 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 3 769 281 225 62 0 chr15 24212139 24212219 -79282755 + RMER1B Other Other 981 1065 -1 3 769 349 345 71 18 chr15 24212909 24213077 -79281897 - B4 SINE B4 -90 202 26 3 769 230 310 0 12 chr15 24213174 24213259 -79281715 - Lx4B LINE L1 -17 7041 6958 3 769 465 308 174 13 chr15 24213272 24213496 -79281478 - B4A SINE B4 -29 263 4 3 769 2250 140 3 8 chr15 24213872 24214232 -79280742 - Lx2 LINE L1 0 6997 6640 3 769 222 88 51 34 chr15 24214237 24214296 -79280678 + (TTTG)n Simple_repeat Simple_repeat 1 60 0 3 769 1119 90 0 0 chr15 24214296 24214440 -79280534 - B1_Mm SINE Alu 0 147 4 3 769 339 182 0 0 chr15 24214643 24214698 -79280276 + L1Md_F2 LINE L1 168 222 -6394 3 769 30781 94 14 6 chr15 24214695 24219729 -79275245 + L1Md_F2 LINE L1 510 5585 -298 3 769 7363 70 7 17 chr15 24219730 24220731 -79274243 + L1Md_F2 LINE L1 5587 6577 -5 3 769 433 207 193 6 chr15 24220904 24221082 -79273892 - Lx3C LINE L1 -11 6965 6755 3 769 933 137 0 0 chr15 24222088 24222227 -79272747 + B1_Mus1 SINE Alu 1 139 -9 3 769 342 0 0 0 chr15 24222227 24222265 -79272709 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3 769 26 50 0 0 chr15 24223117 24223157 -79271817 + AT_rich Low_complexity Low_complexity 1 40 0 3 769 849 188 46 30 chr15 24223297 24223524 -79271450 - Lx6 LINE L1 -744 6952 6724 3 769 1056 223 0 0 chr15 24224628 24224839 -79270135 - Lx6 LINE L1 -752 6708 6498 3 769 6680 176 17 41 chr15 24224839 24226966 -79268008 + Lx3C LINE L1 4906 6974 -2 3 769 393 22 0 0 chr15 24227035 24227081 -79267893 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 3 769 1036 224 39 67 chr15 24227435 24227541 -79267433 - RLTR11A LTR ERVK 0 528 433 3 769 3459 28 2 0 chr15 24227541 24227936 -79267038 - MTA_Mm LTR MaLR 0 396 1 3 769 1036 224 39 67 chr15 24227936 24228159 -79266815 - RLTR11A LTR ERVK -96 432 208 3 769 707 206 9 5 chr15 24228164 24228388 -79266586 + CT-rich Low_complexity Low_complexity 1 225 0 3 769 3658 147 20 7 chr15 24228389 24228985 -79265989 - Lx LINE L1 -8 6646 6043 3 769 886 84 15 0 chr15 24228985 24229116 -79265858 + Lx LINE L1 5927 6059 -595 3 769 302 289 20 49 chr15 24229116 24229218 -79265756 - RLTR11A LTR ERVK -233 295 197 3 769 280 177 59 71 chr15 24229339 24229397 -79265577 - Lx6 LINE L1 -1265 6195 6133 3 769 3525 18 2 0 chr15 24229397 24229792 -79265182 + MTA_Mm LTR MaLR 1 396 0 3 769 280 177 59 71 chr15 24229792 24229818 -79265156 - Lx6 LINE L1 -1328 6132 6112 3 769 1362 289 35 33 chr15 24229902 24230299 -79264675 - MTD LTR MaLR -8 411 14 3 769 349 279 77 47 chr15 24230314 24230483 -79264491 - MTD-int LTR MaLR -3 1255 1082 3 769 225 0 0 0 chr15 24230483 24230508 -79264466 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 769 441 36 0 0 chr15 24230863 24230918 -79264056 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 769 387 0 0 0 chr15 24232114 24232157 -79262817 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 769 777 254 154 26 chr15 24232418 24232510 -79262464 - ORR1D1 LTR MaLR -110 264 165 3 769 549 0 0 0 chr15 24232510 24232571 -79262403 + (GA)n Simple_repeat Simple_repeat 2 62 0 3 769 777 254 154 26 chr15 24232571 24232712 -79262262 - ORR1D1 LTR MaLR -210 164 1 3 769 659 282 47 14 chr15 24233161 24233373 -79261601 + RLTR45 LTR ERVK 264 482 0 3 769 675 243 140 5 chr15 24233559 24233745 -79261229 + ORR1D2 LTR MaLR 160 370 0 3 769 21 57 0 0 chr15 24234353 24234388 -79260586 + AT_rich Low_complexity Low_complexity 1 35 0 3 769 590 329 101 29 chr15 24234893 24235269 -79259705 + Lx7 LINE L1 6092 6494 -1202 3 769 405 260 11 1 chr15 24235308 24235415 -79259559 + Lx7 LINE L1 6592 6708 -765 3 769 566 335 24 12 chr15 24235445 24235696 -79259278 + MER67C LTR ERV1 410 663 -48 3 769 580 346 11 11 chr15 24235751 24235932 -79259042 + B3 SINE B2 12 192 -24 3 769 2526 291 64 15 chr15 24236768 24237831 -79257143 - Lx6 LINE L1 -26 7434 6094 3 769 498 33 0 0 chr15 24237841 24237901 -79257073 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 769 423 56 0 0 chr15 24238076 24238130 -79256844 + (TGG)n Simple_repeat Simple_repeat 3 56 0 3 769 849 203 62 21 chr15 24238779 24239020 -79255954 - L1_Mur3 LINE L1 -3307 2573 2323 3 769 7567 47 12 1 chr15 24239014 24240031 -79254943 - L1Md_F2 LINE L1 -2 6580 5553 3 769 4407 20 0 0 chr15 24240031 24240524 -79254450 + MT2_Mm LTR ERVL 1 493 0 3 769 2519 79 3 6 chr15 24240524 24240549 -79254425 - L1Md_F2 LINE L1 -331 5552 5529 3 769 44721 18 8 0 chr15 24240549 24245844 -79249130 + MERVL-int LTR ERVL 26 5360 -125 3 769 383 167 46 35 chr15 24245844 24245931 -79249043 + ORR1A3-int LTR MaLR 553 640 -1323 3 769 302 0 0 0 chr15 24245931 24245969 -79249005 + MERVL-int LTR ERVL 5448 5485 0 3 769 4407 20 0 0 chr15 24245969 24246462 -79248512 + MT2_Mm LTR ERVL 1 493 0 3 769 2006 44 0 0 chr15 24246462 24246714 -79248260 - L1_Mm LINE L1 -326 5557 5306 3 769 1149 62 14 0 chr15 24246891 24247036 -79247938 - B1_Mus1 SINE Alu 0 148 2 3 769 360 367 0 8 chr15 24248098 24248219 -79246755 - B1F SINE Alu -13 136 17 3 770 2712 65 0 11 chr15 24248744 24249103 -79245871 - L1Md_F2 LINE L1 -1 6581 6227 3 770 1904 187 29 17 chr15 24250351 24250765 -79244209 + Lx2B LINE L1 6578 6996 -4 3 770 2192 94 162 0 chr15 24250927 24251279 -79243695 + IAPLTR2a LTR ERVK 1 409 -2 3 770 22939 49 23 18 chr15 24251286 24254356 -79240618 + IAPEz-int LTR ERVK 3 3076 -3405 3 770 6188 59 12 16 chr15 24254342 24255190 -79239784 + IAPEz-int LTR ERVK 5630 6473 -8 3 770 2192 94 162 0 chr15 24255197 24255549 -79239425 + IAPLTR2a LTR ERVK 1 409 -2 3 770 916 187 54 11 chr15 24255549 24255725 -79239249 + URR1A DNA MER1_type 42 226 0 3 770 437 280 85 76 chr15 24255725 24255773 -79239201 - CYRA11_Mm Unknown Y-chromosome -265 352 127 3 770 1775 230 22 3 chr15 24255866 24256232 -79238742 + RMER15 LTR ERVL 203 575 0 3 770 612 339 17 6 chr15 24257384 24257562 -79237412 - ID_B1 SINE B4 -43 181 2 3 770 753 265 39 15 chr15 24257778 24257981 -79236993 + B3 SINE B2 1 208 -8 3 770 23 0 0 0 chr15 24257981 24258004 -79236970 + AT_rich Low_complexity Low_complexity 1 23 0 3 770 387 105 0 0 chr15 24258681 24258738 -79236236 + (CCCCCT)n Simple_repeat Simple_repeat 6 62 0 3 770 816 261 31 27 chr15 24259942 24260166 -79234808 + Lx5 LINE L1 6822 7046 -4 3 770 1009 289 42 8 chr15 24260534 24260796 -79234178 - MTD LTR MaLR 0 419 149 3 770 303 50 66 16 chr15 24261553 24261614 -79233360 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 3 770 652 289 83 86 chr15 24261848 24262196 -79232778 - ORR1E LTR MaLR -12 347 1 3 770 232 268 69 48 chr15 24262289 24262434 -79232540 + L1ME1 LINE L1 5821 5968 -211 3 770 22 0 0 0 chr15 24262523 24262545 -79232429 + AT_rich Low_complexity Low_complexity 1 22 0 3 770 24 53 0 0 chr15 24263856 24263894 -79231080 + AT_rich Low_complexity Low_complexity 1 38 0 3 770 24 53 0 0 chr15 24263976 24264014 -79230960 + AT_rich Low_complexity Low_complexity 1 38 0 3 770 3459 82 15 54 chr15 24264265 24264806 -79230168 + Lx LINE L1 6134 6653 -1 3 770 508 81 12 0 chr15 24264950 24265036 -79229938 + L1_Mus3 LINE L1 6550 6636 -2 3 770 1094 92 0 0 chr15 24265049 24265191 -79229783 + B1_Mus1 SINE Alu 2 143 -5 3 770 6179 53 18 1 chr15 24265395 24266190 -79228784 + RLTR13C2 LTR ERVK 1 808 0 3 770 201 121 0 0 chr15 24267350 24267383 -79227591 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 770 4443 143 30 8 chr15 24267797 24268510 -79226464 + Lx4A LINE L1 6331 7058 0 3 770 338 258 21 0 chr15 24268521 24268614 -79226360 - Lx7 LINE L1 -7 7689 7595 3 770 306 318 60 30 chr15 24268674 24268807 -79226167 + B1F SINE Alu 1 137 -12 3 770 474 18 0 0 chr15 24268826 24268881 -79226093 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 770 502 367 31 22 chr15 24269157 24269430 -79225544 + B4A SINE B4 11 285 -7 3 770 1614 68 0 0 chr15 24269430 24269637 -79225337 + L1_Mus3 LINE L1 6115 6321 -317 3 770 977 16 0 8 chr15 24269637 24269759 -79225215 + B1_Mm SINE Alu 27 147 0 3 770 1891 111 6 90 chr15 24269780 24270125 -79224849 + L1_Mus3 LINE L1 6317 6632 -6 3 770 198 0 0 0 chr15 24270126 24270148 -79224826 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 770 339 313 51 27 chr15 24270703 24270959 -79224015 + L1MB4 LINE L1 5902 6163 -17 3 770 21 36 0 0 chr15 24271025 24271053 -79223921 + AT_rich Low_complexity Low_complexity 1 28 0 3 770 372 94 0 0 chr15 24271072 24271125 -79223849 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 770 398 145 42 28 chr15 24271385 24271527 -79223447 + (TA)n Simple_repeat Simple_repeat 1 144 0 3 770 294 363 40 0 chr15 24271890 24272014 -79222960 - Lx8 LINE L1 -722 6751 6623 3 770 325 270 47 13 chr15 24272068 24272218 -79222756 - RLTR15 LTR ERVK -46 313 159 3 770 252 0 0 0 chr15 24272229 24272257 -79222717 + (TC)n Simple_repeat Simple_repeat 2 29 0 3 770 405 0 0 0 chr15 24272257 24272301 -79222673 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 770 267 133 0 0 chr15 24272838 24272883 -79222091 + (A)n Simple_repeat Simple_repeat 1 45 0 3 770 226 236 142 110 chr15 24272925 24272957 -79222017 - Tigger6a DNA MER2_type -74 1009 974 3 770 182 37 0 36 chr15 24272957 24272985 -79221989 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 3 770 226 236 142 110 chr15 24272985 24273111 -79221863 - Tigger6a DNA MER2_type -110 973 841 3 770 3229 55 8 0 chr15 24273111 24273508 -79221466 + MTB LTR MaLR 1 400 0 3 770 226 236 142 110 chr15 24273508 24273567 -79221407 - Tigger6a DNA MER2_type -243 840 784 3 770 1066 175 15 10 chr15 24273755 24273951 -79221023 - Lx4B LINE L1 -40 7018 6822 3 770 1343 236 35 8 chr15 24273947 24274314 -79220660 + Lx4B LINE L1 6644 7020 -38 3 770 405 0 0 0 chr15 24274330 24274375 -79220599 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 3 770 305 219 27 0 chr15 24274720 24274793 -79220181 + Lx9 LINE L1 7392 7466 -178 3 770 336 336 141 43 chr15 24274827 24275013 -79219961 - Tigger6b DNA MER2_type -6 1591 1386 3 770 450 0 0 0 chr15 24275013 24275063 -79219911 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 3 770 1178 35 14 0 chr15 24275063 24275204 -79219770 - B1_Mm SINE Alu -3 144 2 3 770 336 336 141 43 chr15 24275204 24275414 -79219560 - Tigger6b DNA MER2_type -212 1385 1156 3 770 1548 241 79 19 chr15 24275530 24275996 -79218978 - Tigger6a DNA MER2_type -585 498 5 3 770 494 331 175 32 chr15 24276182 24276491 -79218483 - ORR1E LTR MaLR -5 354 2 3 770 1530 166 19 156 chr15 24276611 24276678 -79218296 - ORR1A4 LTR MaLR 0 329 272 4 770 3894 98 2 4 chr15 24276678 24277224 -79217750 - L1_Mus2 LINE L1 0 6566 6022 4 770 1530 166 19 156 chr15 24277224 24277534 -79217440 - ORR1A4 LTR MaLR -58 271 4 4 770 534 139 0 258 chr15 24277624 24277779 -79217195 - ORR1B1 LTR MaLR -240 154 4 4 770 207 0 0 0 chr15 24277982 24278005 -79216969 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 770 427 258 120 8 chr15 24278040 24278165 -79216809 - B1_Mur2 SINE Alu -1 148 10 4 770 10135 77 49 6 chr15 24279743 24282765 -79212209 + L1Md_F2 LINE L1 409 5584 -299 4 770 7267 79 14 0 chr15 24282767 24283737 -79211237 + L1Md_F2 LINE L1 5587 6570 -12 4 770 316 307 0 102 chr15 24284408 24284535 -79210439 - B4 SINE B4 -141 151 38 4 770 2324 111 139 2 chr15 24284568 24284991 -79209983 + RLTR47_MM LTR ERV1 52 532 0 4 770 612 0 0 0 chr15 24284996 24285064 -79209910 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 770 204 40 0 0 chr15 24285072 24285097 -79209877 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 770 247 391 9 0 chr15 24285193 24285303 -79209671 + Lx8 LINE L1 7116 7226 -247 4 770 411 21 0 0 chr15 24285306 24285354 -79209620 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 770 735 225 64 101 chr15 24286378 24286457 -79208517 - RMER10B LTR ERVL -139 259 191 4 770 321 26 0 0 chr15 24286457 24286495 -79208479 + (GGGAA)n Simple_repeat Simple_repeat 3 40 0 4 770 1266 90 0 0 chr15 24286495 24286672 -79208302 + (GGAGA)n Simple_repeat Simple_repeat 3 180 0 4 770 735 225 64 101 chr15 24286672 24286858 -79208116 - RMER10B LTR ERVL -208 190 4 4 770 180 0 0 0 chr15 24286926 24286946 -79208028 + (TTTTG)n Simple_repeat Simple_repeat 4 23 0 4 770 576 0 0 0 chr15 24286981 24287045 -79207929 + (GTTTG)n Simple_repeat Simple_repeat 3 66 0 4 770 486 139 0 0 chr15 24287045 24287117 -79207857 - B1_Mur3 SINE Alu -12 137 66 4 770 285 29 0 0 chr15 24287165 24287199 -79207775 + (CCA)n Simple_repeat Simple_repeat 2 35 0 4 770 1762 103 8 0 chr15 24288665 24288928 -79206046 - L1_Mus4 LINE L1 -205 6431 6167 4 770 19839 108 19 16 chr15 24288927 24291282 -79203692 - Lx3A LINE L1 -8 6973 4644 4 770 281 26 26 0 chr15 24291282 24291320 -79203654 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 770 19839 91 26 3 chr15 24291320 24293146 -79201828 - Lx3A LINE L1 -1243 4643 2757 4 770 423 0 0 0 chr15 24293606 24293653 -79201321 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 770 438 302 36 44 chr15 24293775 24293941 -79201033 - B4 SINE B4 -2 290 119 4 770 258 47 0 0 chr15 24294451 24294494 -79200480 + L1_Mus4 LINE L1 6587 6629 -7 4 770 1797 168 13 16 chr15 24295030 24295344 -79199630 + ORR1B1 LTR MaLR 74 386 -8 4 770 420 20 0 0 chr15 24295658 24295707 -79199267 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 770 34832 26 2 11 chr15 24295920 24300938 -79194036 + L1Md_A LINE L1 625 5586 -297 4 770 8428 31 0 0 chr15 24300938 24301932 -79193042 + L1Md_A LINE L1 5587 6580 -2 4 770 1737 87 4 0 chr15 24302319 24302572 -79192402 - L1_Mus1 LINE L1 -459 6108 5855 4 770 2325 59 0 0 chr15 24302572 24302882 -79192092 + L1_Mus1 LINE L1 6273 6567 0 4 770 493 272 8 16 chr15 24303003 24303130 -79191844 - MTEa LTR MaLR -87 292 167 4 770 212 311 0 0 chr15 24303669 24303730 -79191244 + GA-rich Low_complexity Low_complexity 111 171 0 4 770 348 24 0 0 chr15 24304007 24304048 -79190926 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 770 338 320 55 73 chr15 24304074 24304239 -79190735 + RSINE1 SINE B4 4 165 0 4 770 402 312 0 0 chr15 24304241 24304369 -79190605 + (CA)n Simple_repeat Simple_repeat 1 128 0 4 770 578 325 6 43 chr15 24304828 24304921 -79190053 + B3A SINE B2 2 95 -103 4 770 3854 116 63 33 chr15 24304921 24305650 -79189324 - RMER17A LTR ERVK 0 751 1 4 770 578 325 6 43 chr15 24305650 24305717 -79189257 + B3A SINE B2 96 156 -42 4 770 356 0 23 0 chr15 24305725 24305769 -79189205 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 770 633 27 0 0 chr15 24306298 24306373 -79188601 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 4 770 551 178 34 68 chr15 24306407 24306612 -79188362 - Lx9 LINE L1 -22 7622 7425 4 770 629 276 22 6 chr15 24306624 24306806 -79188168 + Lx9 LINE L1 7211 7395 -249 4 770 331 321 71 51 chr15 24306809 24307006 -79187968 - L1MDb LINE L1 -5186 1223 1023 4 770 373 403 28 84 chr15 24307532 24307852 -79187122 - L1MDb LINE L1 -6064 345 44 4 770 214 258 21 31 chr15 24308056 24308152 -79186822 + A-rich Low_complexity Low_complexity 1 95 0 4 770 5339 115 14 14 chr15 24308247 24309136 -79185838 + Lx3_Mus LINE L1 6029 6917 -92 4 770 440 115 4 0 chr15 24309378 24309463 -79185511 + Lx3A LINE L1 6601 6687 -286 4 770 247 196 0 0 chr15 24309526 24309582 -79185392 + T-rich Low_complexity Low_complexity 1 56 0 4 770 1754 199 14 22 chr15 24309702 24310071 -79184903 + Lx5 LINE L1 6685 7050 0 4 770 236 331 74 61 chr15 24310180 24310328 -79184646 + Tigger13a DNA MER2_type 112 261 -510 4 770 2223 201 54 11 chr15 24312712 24313108 -79181866 + RLTR20B1 LTR ERVK 55 469 -94 4 770 423 0 0 0 chr15 24313108 24313155 -79181819 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 770 2223 201 54 11 chr15 24313155 24313205 -79181769 + RLTR20B1 LTR ERVK 470 520 -43 4 770 405 0 0 0 chr15 24313301 24313346 -79181628 + (TC)n Simple_repeat Simple_repeat 2 46 0 4 770 306 0 0 0 chr15 24313346 24313379 -79181595 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 770 6853 164 42 21 chr15 24313569 24314304 -79180670 + Lx4B LINE L1 5666 6416 -642 4 770 1820 138 24 65 chr15 24314304 24314644 -79180330 - ORR1A3 LTR MaLR 0 326 1 4 770 6853 164 42 21 chr15 24314644 24315270 -79179704 + Lx4B LINE L1 6417 7055 -3 4 770 350 134 15 0 chr15 24315291 24315358 -79179616 + (TG)n Simple_repeat Simple_repeat 1 68 0 4 770 357 312 92 56 chr15 24315428 24315733 -79179241 + RMER10A LTR ERVL 121 436 -6 4 770 22 35 0 0 chr15 24315733 24315762 -79179212 + AT_rich Low_complexity Low_complexity 1 29 0 4 770 958 258 198 52 chr15 24316407 24316902 -79178072 - RMER2 LTR ERV1 0 567 1 4 770 319 109 55 0 chr15 24317081 24317136 -79177838 + RLTR42-int LTR ERVK 2035 2092 -3430 4 770 909 255 31 88 chr15 24317154 24317507 -79177467 + MYSERV6-int LTR ERVK 7172 7504 -1455 4 770 489 17 0 0 chr15 24317570 24317628 -79177346 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 770 288 0 0 0 chr15 24317628 24317659 -79177315 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 770 865 107 14 0 chr15 24317672 24317812 -79177162 + (TTTC)n Simple_repeat Simple_repeat 3 144 0 4 770 246 296 35 9 chr15 24317876 24317992 -79176982 + Lx7 LINE L1 7578 7696 0 4 770 3867 36 2 6 chr15 24318081 24318554 -79176420 - L1Md_F3 LINE L1 0 6584 6114 4 770 2835 25 33 0 chr15 24318554 24318915 -79176059 + L1Md_F3 LINE L1 5712 6084 -500 4 770 452 335 0 66 chr15 24318971 24319169 -79175805 - B3A SINE B2 -12 186 2 4 770 186 375 0 22 chr15 24319457 24319547 -79175427 + L2a LINE L2 3102 3189 -237 4 770 271 281 0 33 chr15 24319662 24319754 -79175220 + (CATA)n Simple_repeat Simple_repeat 4 92 0 4 770 25 0 0 0 chr15 24320727 24320752 -79174222 + AT_rich Low_complexity Low_complexity 1 25 0 4 770 318 26 0 0 chr15 24320794 24320832 -79174142 + U2 snRNA snRNA 1 38 -150 4 770 453 36 0 0 chr15 24323058 24323113 -79171861 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 770 1130 273 72 13 chr15 24323299 24323603 -79171371 + MTEb LTR MaLR 1 322 -57 4 770 219 152 0 0 chr15 24323622 24323668 -79171306 + T-rich Low_complexity Low_complexity 3 48 0 4 770 313 120 0 20 chr15 24323962 24324013 -79170961 - ORR1B2 LTR MaLR 0 370 321 4 770 916 163 99 5 chr15 24324016 24324117 -79170857 - Lx2B LINE L1 -13 6987 6883 4 770 225 0 0 0 chr15 24324117 24324142 -79170832 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 4 770 916 163 99 5 chr15 24324142 24324262 -79170712 - Lx2B LINE L1 -118 6882 6747 4 770 942 219 91 17 chr15 24324262 24324494 -79170480 - ORR1B2 LTR MaLR -118 249 1 4 770 24 0 0 0 chr15 24324645 24324669 -79170305 + AT_rich Low_complexity Low_complexity 1 24 0 4 770 299 318 76 15 chr15 24324976 24325181 -79169793 + L1MA4A LINE L1 5769 5986 -194 4 770 2027 187 166 45 chr15 24325263 24325879 -79169095 + RMER6C LTR ERVK 1 690 0 4 770 2523 117 111 9 chr15 24325912 24326343 -79168631 - IAPLTR2_Mm LTR ERVK 0 475 1 4 770 30 59 0 0 chr15 24326454 24326505 -79168469 + AT_rich Low_complexity Low_complexity 1 51 0 4 770 587 285 89 6 chr15 24327275 24327455 -79167519 + B3 SINE B2 18 212 -4 4 770 267 294 11 66 chr15 24327561 24327652 -79167322 - RSINE1 SINE B4 -2 163 78 4 770 225 333 178 12 chr15 24328199 24328457 -79166517 + Lx8 LINE L1 7055 7355 -118 4 770 384 59 0 0 chr15 24328490 24328541 -79166433 + (TA)n Simple_repeat Simple_repeat 2 52 0 4 770 488 312 61 61 chr15 24329269 24329343 -79165631 + RSINE1 SINE B4 2 69 -96 4 770 1140 205 4 9 chr15 24329343 24329569 -79165405 - URR1B DNA MER1_type 0 225 1 4 770 488 312 61 61 chr15 24329569 24329641 -79165333 + RSINE1 SINE B4 70 148 -17 4 770 216 0 0 0 chr15 24329647 24329671 -79165303 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 770 332 242 28 83 chr15 24330032 24330140 -79164834 - RLTR18 LTR ERVK 0 616 515 4 770 351 0 0 0 chr15 24330152 24330191 -79164783 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 770 215 84 33 78 chr15 24330413 24330503 -79164471 + T-rich Low_complexity Low_complexity 4 89 0 4 770 1085 75 0 26 chr15 24330503 24330654 -79164320 - B1_Mus1 SINE Alu 0 148 2 4 770 2012 275 101 53 chr15 24331140 24332353 -79162621 - RMER1A Other Other -12 1018 18 4 770 22 35 0 0 chr15 24332421 24332450 -79162524 + AT_rich Low_complexity Low_complexity 1 29 0 4 770 1733 80 0 0 chr15 24333576 24333801 -79161173 - L1_Mus1 LINE L1 0 6567 6343 4 770 1603 85 9 0 chr15 24333801 24334012 -79160962 + L1_Mus1 LINE L1 6007 6219 -348 4 770 664 245 124 19 chr15 24335167 24335393 -79159581 + RLTR11A LTR ERVK 16 248 -329 4 770 381 346 22 0 chr15 24335508 24335687 -79159287 - L1M2 LINE L1 -515 5776 5594 4 770 237 158 17 34 chr15 24335690 24335749 -79159225 + T-rich Low_complexity Low_complexity 3 60 0 4 770 313 275 101 51 chr15 24335840 24336097 -79158877 - L1_Rod LINE L1 -440 5407 5138 4 770 1652 233 70 18 chr15 24336204 24336602 -79158372 + MTC LTR MaLR 3 421 0 4 770 2518 59 22 61 chr15 24339226 24339586 -79155388 + ORR1A1 LTR MaLR 1 346 0 5 770 22 0 0 0 chr15 24340189 24340211 -79154763 + AT_rich Low_complexity Low_complexity 1 22 0 5 770 618 51 0 0 chr15 24340634 24340712 -79154262 + (GA)n Simple_repeat Simple_repeat 2 79 0 5 770 24 0 0 0 chr15 24340954 24340978 -79153996 + AT_rich Low_complexity Low_complexity 1 24 0 5 770 420 233 48 72 chr15 24340988 24341113 -79153861 + B3A SINE B2 1 122 -76 5 770 1067 191 25 33 chr15 24341113 24341366 -79153608 + RLTR20B3 LTR ERVK 3 246 -288 5 770 35608 56 2 18 chr15 24341367 24346742 -79148232 + L1Md_F LINE L1 304 5586 -297 5 770 8439 29 2 0 chr15 24346742 24347735 -79147239 + L1Md_A LINE L1 5587 6581 -1 5 770 2951 86 10 12 chr15 24347815 24348228 -79146746 - L1_Mus1 LINE L1 0 6567 6156 5 770 522 288 37 16 chr15 24348363 24348591 -79146383 + RMER15 LTR ERVL 29 353 -222 5 770 1452 187 170 16 chr15 24348680 24348940 -79146034 - MTC LTR MaLR 0 421 123 5 770 351 0 0 0 chr15 24348940 24348979 -79145995 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 770 1452 187 170 16 chr15 24348979 24349083 -79145891 - MTC LTR MaLR -299 122 1 5 770 616 295 182 34 chr15 24350028 24350379 -79144595 + Lx8 LINE L1 7068 7470 -3 5 770 2569 248 64 19 chr15 24351611 24351697 -79143277 + Lx5 LINE L1 6352 6430 -620 5 770 2241 112 8 101 chr15 24351697 24352093 -79142881 + RLTR10D LTR ERVK 1 359 0 5 770 2569 248 64 19 chr15 24352093 24352675 -79142299 + Lx5 LINE L1 6431 7049 -1 5 770 25 31 0 0 chr15 24352857 24352889 -79142085 + AT_rich Low_complexity Low_complexity 1 32 0 5 770 486 169 34 0 chr15 24352891 24352980 -79141994 - Lx3B LINE L1 0 6973 6882 5 770 1540 52 5 0 chr15 24353757 24353949 -79141025 - B2_Mm1t SINE B2 0 193 1 5 770 8606 118 46 12 chr15 24354062 24355126 -79139848 - Lx3_Mus LINE L1 0 7009 5913 5 770 1004 71 14 0 chr15 24355126 24355267 -79139707 + (TTTC)n Simple_repeat Simple_repeat 2 144 0 5 770 8606 86 41 55 chr15 24355267 24356056 -79138918 - Lx3_Mus LINE L1 -1097 5912 5138 5 770 261 336 47 16 chr15 24356125 24356252 -79138722 + MLT1J1 LTR MaLR 231 361 -83 5 770 525 329 55 0 chr15 24356387 24356533 -79138441 + RSINE1 SINE B4 10 163 -2 5 770 555 320 88 57 chr15 24357069 24357387 -79137587 - MLT1C LTR MaLR -129 338 11 5 770 340 314 176 51 chr15 24359678 24359933 -79135041 + B4A SINE B4 3 289 -3 5 770 216 97 0 0 chr15 24360482 24360513 -79134461 + (TC)n Simple_repeat Simple_repeat 2 32 0 5 770 2325 43 4 0 chr15 24361123 24361399 -79133575 - L1Md_F2 LINE L1 -236 6346 6070 5 770 1335 96 50 0 chr15 24361399 24361597 -79133377 + L1Md_F2 LINE L1 6363 6570 -12 5 770 325 365 69 49 chr15 24361707 24362156 -79132818 + L1M4c LINE L1 372 829 -5555 5 770 305 312 0 0 chr15 24362300 24362377 -79132597 + RSINE1 SINE B4 2 78 -87 5 770 323 258 0 61 chr15 24362387 24362486 -79132488 + L1M4c LINE L1 1510 1602 -4782 5 770 990 290 93 22 chr15 24362718 24363385 -79131589 + L1M4c LINE L1 1601 2314 -4070 5 770 673 129 0 0 chr15 24363435 24363535 -79131439 - BGLII LTR ERVK 0 421 322 5 770 1019 138 18 0 chr15 24363535 24363702 -79131272 - RLTR1B LTR ERV1 0 512 343 5 770 1124 65 13 0 chr15 24363706 24363860 -79131114 - RLTR1B LTR ERV1 -102 410 255 5 770 2171 94 3 0 chr15 24363983 24364301 -79130673 - BGLII LTR ERVK -95 326 8 5 770 292 291 43 14 chr15 24364344 24364553 -79130421 + L1M4c LINE L1 3503 3717 -2659 5 770 455 334 87 31 chr15 24364577 24364969 -79130005 + L1M4c LINE L1 4879 5292 -1090 5 770 33681 87 16 2 chr15 24365238 24371348 -79123626 - L1Md_F2 LINE L1 -5 6577 380 5 770 369 0 0 0 chr15 24371394 24371435 -79123539 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 5 770 332 358 49 0 chr15 24371441 24371564 -79123410 - RSINE1 SINE B4 -19 146 18 5 770 778 312 67 35 chr15 24371598 24372139 -79122835 - L1M2 LINE L1 -1866 4277 3720 5 770 278 280 88 65 chr15 24372482 24372776 -79122198 + L1M4c LINE L1 5765 6065 -471 5 770 432 0 0 0 chr15 24372875 24372923 -79122051 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 770 195 378 50 50 chr15 24373063 24373222 -79121752 - L2 LINE L2 -746 2673 2515 5 770 245 346 38 19 chr15 24373852 24373958 -79121016 - B1F SINE Alu -39 110 3 5 770 402 363 24 0 chr15 24374388 24374512 -79120462 + RSINE1 SINE B4 10 136 -29 5 770 315 0 0 0 chr15 24374530 24374565 -79120409 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 770 287 414 29 45 chr15 24374796 24375039 -79119935 + Tigger7 DNA MER2_type 31 269 -2222 5 770 894 283 24 36 chr15 24376157 24376406 -79118568 + MTD LTR MaLR 80 325 -94 5 770 460 331 67 7 chr15 24376420 24376703 -79118271 + L1MA5 LINE L1 5539 5838 -462 5 770 2263 47 1 1 chr15 24376682 24376970 -79118004 + L1Md_F3 LINE L1 5329 5615 -556 5 770 7904 37 11 3 chr15 24376970 24377946 -79117028 + L1Md_F3 LINE L1 5587 6570 -14 5 770 430 254 0 71 chr15 24378407 24378547 -79116427 - Lx7 LINE L1 -4 7692 7563 5 770 474 49 0 0 chr15 24378547 24378608 -79116366 + (TAG)n Simple_repeat Simple_repeat 2 62 0 5 96 2621 240 44 51 chr15 24378633 24379411 -79115563 - Lx7 LINE L1 -234 7462 6691 5 771 1854 287 61 46 chr15 24379434 24380200 -79114774 + Lx7 LINE L1 5590 6367 -1329 5 771 279 288 0 0 chr15 24380488 24380568 -79114406 - L1MCa LINE L1 -5577 931 852 5 771 475 348 108 22 chr15 24380859 24381267 -79113707 - L1MCa LINE L1 -5890 618 176 5 771 1089 199 50 0 chr15 24381479 24381720 -79113254 - Lx3C LINE L1 -3 6973 6721 5 771 21 36 0 0 chr15 24382586 24382614 -79112360 + AT_rich Low_complexity Low_complexity 1 28 0 5 771 346 386 79 11 chr15 24382643 24382821 -79112153 + B4 SINE B4 47 236 -56 5 771 1083 172 45 5 chr15 24383251 24383473 -79111501 + Lx LINE L1 6424 6654 0 5 771 1653 96 8 31 chr15 24383710 24383967 -79111007 + Lx LINE L1 6401 6651 -3 5 771 1010 112 0 22 chr15 24384528 24384710 -79110264 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 5 771 3002 77 28 12 chr15 24384753 24385176 -79109798 - Lx3_Mus LINE L1 -1 7008 6579 5 771 345 83 21 0 chr15 24385441 24385489 -79109485 - HAL1-3A_ME LINE L1 -835 2023 1975 5 771 359 226 24 94 chr15 24385630 24385757 -79109217 + RMER10B LTR ERVL 274 391 -7 5 771 2023 273 22 47 chr15 24387158 24387780 -79107194 - RLTR18 LTR ERVK 0 616 10 5 771 2811 191 29 33 chr15 24388796 24389374 -79105600 + RMER6D LTR ERVK 1 576 -144 5 771 286 95 0 0 chr15 24389375 24389417 -79105557 + RLTR12A LTR ERVK 1 42 -526 5 771 5988 167 14 2 chr15 24389532 24390628 -79104346 - L1_Mur2 LINE L1 -1439 4438 3330 5 771 8753 130 8 10 chr15 24390626 24392407 -79102567 + L1_Mus4 LINE L1 4409 6183 -453 5 771 4323 108 47 0 chr15 24392407 24393046 -79101928 + L1_Mus3 LINE L1 5965 6633 -5 5 771 2342 126 47 45 chr15 24393047 24393495 -79101479 + L1_Mus4 LINE L1 6206 6654 0 5 771 2318 197 96 6 chr15 24393637 24394127 -79100847 + RLTR12A LTR ERVK 35 568 0 5 771 824 197 13 7 chr15 24394127 24394275 -79100699 + RMER6D LTR ERVK 572 720 0 5 771 951 242 160 21 chr15 24394597 24394922 -79100052 + ORR1D2 LTR MaLR 1 370 0 5 771 235 339 27 11 chr15 24395119 24395307 -79099667 + L1MA6 LINE L1 5879 6069 -231 5 771 189 0 0 0 chr15 24395341 24395362 -79099612 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 771 363 291 98 33 chr15 24395520 24395673 -79099301 + RSINE1 SINE B4 3 165 0 5 771 583 357 58 29 chr15 24396333 24396610 -79098364 + B4A SINE B4 8 292 0 5 771 985 195 35 55 chr15 24397204 24397640 -79097334 - RMER17C LTR ERVK 0 410 48 5 771 231 318 44 61 chr15 24397671 24397785 -79097189 + RLTR14 LTR ERV1 271 382 0 5 771 4130 170 106 33 chr15 24397847 24398676 -79096298 - RMER19B LTR ERVK -12 890 1 5 771 1145 207 12 8 chr15 24398679 24398927 -79096047 - Lx7 LINE L1 -1720 5976 5728 5 771 2038 241 80 10 chr15 24398934 24399450 -79095524 + Lx6 LINE L1 6672 7223 -237 5 771 227 217 42 42 chr15 24399464 24399536 -79095438 + Lx7 LINE L1 7620 7691 -5 5 771 31 44 0 0 chr15 24399603 24399648 -79095326 + AT_rich Low_complexity Low_complexity 1 45 0 5 771 699 181 0 0 chr15 24399708 24399863 -79095111 + CT-rich Low_complexity Low_complexity 2 156 0 5 771 1300 280 79 116 chr15 24400234 24400427 -79094547 - Lx5 LINE L1 0 7050 6861 5 771 7422 49 5 6 chr15 24400427 24401368 -79093606 + L1Md_F2 LINE L1 5642 6581 -1 5 771 3111 248 52 35 chr15 24401368 24402810 -79092164 - Lx5 LINE L1 -179 6879 5483 5 771 349 266 71 0 chr15 24402810 24402923 -79092051 - Lx7 LINE L1 -1981 5715 5595 5 771 2215 135 0 0 chr15 24402923 24403250 -79091724 - ORR1A2 LTR MaLR 0 327 1 5 771 680 323 63 39 chr15 24403324 24403707 -79091267 + RLTR11B LTR ERVK 3 394 -59 5 771 249 299 60 50 chr15 24403719 24403920 -79091054 - Lx7 LINE L1 -525 5631 5395 5 771 777 274 149 9 chr15 24403920 24404248 -79090726 + ORR1D1 LTR MaLR 1 374 0 5 771 399 56 0 0 chr15 24405169 24405223 -79089751 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 771 27 92 0 0 chr15 24405253 24405329 -79089645 + AT_rich Low_complexity Low_complexity 1 76 0 5 771 2641 181 68 153 chr15 24405382 24405683 -79089291 + RMER6D LTR ERVK 1 334 -386 5 771 579 15 0 0 chr15 24405683 24405751 -79089223 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 771 2641 181 68 153 chr15 24405751 24406214 -79088760 + RMER6D LTR ERVK 335 700 -20 5 771 1138 222 20 12 chr15 24406215 24406461 -79088513 + RMER6D LTR ERVK 473 720 0 5 771 21 36 0 0 chr15 24406569 24406597 -79088377 + AT_rich Low_complexity Low_complexity 1 28 0 5 771 562 313 58 37 chr15 24407054 24407532 -79087442 - L1MB1 LINE L1 -319 5849 5354 5 771 786 11 0 0 chr15 24407665 24407756 -79087218 + (CA)n Simple_repeat Simple_repeat 2 92 0 5 771 305 345 41 0 chr15 24408011 24408156 -79086818 - L1MD LINE L1 -783 5363 5213 5 771 828 114 0 0 chr15 24408847 24408978 -79085996 + (TG)n Simple_repeat Simple_repeat 1 131 0 5 771 183 80 0 0 chr15 24409415 24409440 -79085534 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 5 771 236 128 26 0 chr15 24409770 24409809 -79085165 + MLT2D LTR ERVL 1 40 -374 5 771 2615 81 84 0 chr15 24410054 24410435 -79084539 + Lx3_Mus LINE L1 6589 7001 -8 5 771 348 24 0 0 chr15 24410494 24410535 -79084439 + (TTA)n Simple_repeat Simple_repeat 2 42 0 5 771 216 402 18 36 chr15 24410574 24410685 -79084289 - RSINE1 SINE B4 -2 163 55 5 771 450 0 0 0 chr15 24411054 24411104 -79083870 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 771 698 352 46 19 chr15 24411110 24411483 -79083491 - Lx8 LINE L1 -528 6945 6563 5 771 376 312 180 20 chr15 24412163 24412418 -79082556 - Lx8 LINE L1 -2 7471 7176 5 771 212 152 0 42 chr15 24412593 24412641 -79082333 + T-rich Low_complexity Low_complexity 1 46 0 5 771 22 0 0 0 chr15 24413757 24413779 -79081195 + AT_rich Low_complexity Low_complexity 1 22 0 6 771 26 0 0 0 chr15 24413844 24413870 -79081104 + AT_rich Low_complexity Low_complexity 1 26 0 6 771 327 170 104 26 chr15 24414436 24414551 -79080423 - Lx9 LINE L1 -1 7643 7520 6 771 300 111 0 0 chr15 24414558 24414603 -79080371 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 771 258 103 62 108 chr15 24414605 24414670 -79080304 + Lx9 LINE L1 7048 7109 -535 6 771 282 56 0 0 chr15 24414693 24414729 -79080245 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 6 771 460 194 71 0 chr15 24414731 24414829 -79080145 - Lx3A LINE L1 -16 6965 6861 6 771 283 320 10 10 chr15 24414834 24414935 -79080039 + Lx9 LINE L1 7139 7239 -405 6 771 252 0 0 0 chr15 24417338 24417366 -79077608 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 6 771 180 0 0 0 chr15 24417374 24417394 -79077580 + (TG)n Simple_repeat Simple_repeat 2 21 0 6 771 239 262 115 53 chr15 24417505 24417618 -79077356 + MLT1H2 LTR MaLR 89 208 -281 6 771 2181 127 6 0 chr15 24417833 24418163 -79076811 + Lx3_Mus LINE L1 6672 7003 -6 6 771 1151 296 108 5 chr15 24418180 24418560 -79076414 + MTD LTR MaLR 1 419 0 6 771 877 311 88 129 chr15 24418601 24419586 -79075388 + MT-int LTR MaLR 57 1000 -98 6 771 846 208 30 84 chr15 24419586 24419849 -79075125 - RMER16 LTR ERVK 0 533 285 6 771 254 119 329 43 chr15 24419883 24419953 -79075021 - RMER16 LTR ERVK -230 303 214 6 771 268 129 58 101 chr15 24419926 24419995 -79074979 - RMER16 LTR ERVK -463 70 5 6 771 357 282 60 0 chr15 24419998 24420115 -79074859 + MT-int LTR MaLR 1121 1244 -14 6 771 324 0 0 0 chr15 24421942 24421978 -79072996 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 771 683 339 71 41 chr15 24422021 24422289 -79072685 - B4A SINE B4 -16 276 1 6 771 29 0 0 0 chr15 24422370 24422399 -79072575 + AT_rich Low_complexity Low_complexity 1 29 0 6 771 426 293 197 34 chr15 24423185 24423418 -79071556 + Charlie1a DNA MER1_type 429 699 -756 6 771 2223 158 0 2 chr15 24423535 24423935 -79071039 - L1_Mm LINE L1 -1845 4038 3640 6 771 7701 99 2 3 chr15 24423934 24425157 -79069817 + L1_Mus4 LINE L1 5415 6636 0 6 771 312 323 95 20 chr15 24425165 24425459 -79069515 + Charlie1a DNA MER1_type 870 1185 -270 6 771 21 36 0 0 chr15 24425492 24425520 -79069454 + AT_rich Low_complexity Low_complexity 1 28 0 6 771 1037 283 105 3 chr15 24425764 24426069 -79068905 + MTD LTR MaLR 70 405 -14 6 771 249 191 130 14 chr15 24426254 24426323 -79068651 + MTD LTR MaLR 299 375 -44 6 771 464 277 8 0 chr15 24426928 24427047 -79067927 - RSINE1 SINE B4 -37 128 9 6 771 1322 139 0 5 chr15 24428279 24428481 -79066493 - L1_Mus4 LINE L1 -176 5707 5507 6 771 5992 93 35 36 chr15 24428469 24428906 -79066068 + L1_Mus4 LINE L1 5714 6144 -492 6 771 402 91 485 0 chr15 24428906 24429005 -79065969 + B1_Mus2 SINE Alu 1 147 0 6 771 5992 93 35 36 chr15 24429005 24429485 -79065489 + L1_Mus4 LINE L1 6145 6630 -6 6 771 621 312 31 26 chr15 24429488 24429715 -79065259 + B4A SINE B4 47 274 -18 6 771 348 290 34 7 chr15 24429759 24429905 -79065069 + (CA)n Simple_repeat Simple_repeat 2 151 0 6 771 309 111 0 0 chr15 24429913 24429958 -79065016 + HAL1-3A_ME LINE L1 1974 2018 -840 6 771 252 59 0 0 chr15 24431358 24431392 -79063582 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 771 767 282 14 54 chr15 24432477 24432698 -79062276 - MTE2a LTR MaLR -1 378 167 6 771 1333 229 8 68 chr15 24432770 24433122 -79061852 - Lx5 LINE L1 -37 7013 6683 6 771 239 327 77 19 chr15 24433311 24433467 -79061507 + MER31A LTR ERV1 118 282 -203 6 771 38 51 0 0 chr15 24433628 24433687 -79061287 + AT_rich Low_complexity Low_complexity 1 59 0 6 771 31 68 0 0 chr15 24434008 24434067 -79060907 + AT_rich Low_complexity Low_complexity 1 59 0 6 771 717 141 104 0 chr15 24434125 24434260 -79060714 - Lx2 LINE L1 -1 6996 6848 6 771 3108 133 4 2 chr15 24434582 24435063 -79059911 + Lx2 LINE L1 6515 6996 -1 6 771 29 28 0 0 chr15 24435063 24435099 -79059875 + AT_rich Low_complexity Low_complexity 1 36 0 6 771 267 31 0 0 chr15 24436281 24436313 -79058661 + (T)n Simple_repeat Simple_repeat 1 32 0 6 771 35076 5 0 0 chr15 24436322 24441002 -79053972 - L1Md_A LINE L1 0 6582 1904 6 771 2558 238 0 70 chr15 24441263 24441324 -79053650 + Lx5 LINE L1 5238 5289 -591 6 771 1091 85 0 0 chr15 24441324 24441465 -79053509 + B1_Mus2 SINE Alu 1 141 -6 6 771 2558 238 0 70 chr15 24441465 24441801 -79053173 + Lx5 LINE L1 5290 5592 -288 6 771 3963 43 2 2 chr15 24441801 24442291 -79052683 - L1Md_F2 LINE L1 0 6582 6093 6 771 2942 226 11 19 chr15 24442291 24442939 -79052035 + Lx5 LINE L1 5593 6238 -812 6 771 2435 225 51 4 chr15 24442967 24443515 -79051459 + Lx5 LINE L1 6466 7039 -11 6 771 349 370 47 49 chr15 24443727 24444113 -79050861 + Lx8 LINE L1 7041 7425 -48 6 771 1143 239 206 38 chr15 24444151 24444638 -79050336 - RLTR26 LTR ERVK 0 642 2 6 771 468 0 0 0 chr15 24446226 24446278 -79048696 + (T)n Simple_repeat Simple_repeat 1 52 0 6 771 222 37 0 0 chr15 24447472 24447499 -79047475 + (A)n Simple_repeat Simple_repeat 1 27 0 6 771 21 0 0 0 chr15 24447516 24447537 -79047437 + AT_rich Low_complexity Low_complexity 1 21 0 6 771 22 88 0 0 chr15 24447586 24447643 -79047331 + AT_rich Low_complexity Low_complexity 1 57 0 6 771 2110 27 8 8 chr15 24448010 24448271 -79046703 - L1Md_F3 LINE L1 0 6584 6324 6 771 1316 75 6 0 chr15 24448271 24448458 -79046516 + L1Md_F3 LINE L1 6163 6356 -282 6 771 21 71 0 0 chr15 24449014 24449056 -79045918 + AT_rich Low_complexity Low_complexity 1 42 0 6 771 180 0 0 0 chr15 24449742 24449762 -79045212 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 6 771 329 333 47 93 chr15 24450256 24450471 -79044503 + B4 SINE B4 10 214 -78 6 771 586 356 44 14 chr15 24450475 24450732 -79044242 + B4 SINE B4 20 288 -4 6 771 186 191 0 0 chr15 24450794 24450841 -79044133 + (TATATG)n Simple_repeat Simple_repeat 4 50 0 6 771 1041 72 0 0 chr15 24450866 24451005 -79043969 + (GAAA)n Simple_repeat Simple_repeat 1 139 0 6 771 207 170 0 41 chr15 24451275 24451324 -79043650 + A-rich Low_complexity Low_complexity 2 48 0 6 771 3182 233 145 67 chr15 24451451 24452437 -79042537 - MTC-int LTR MaLR -194 1064 2 6 771 1570 242 79 10 chr15 24452441 24452833 -79042141 - MTC LTR MaLR -2 419 1 6 771 345 370 70 40 chr15 24453065 24453265 -79041709 - B3A SINE B2 -10 206 1 6 771 1637 201 53 40 chr15 24453693 24454072 -79040902 + ORR1C2 LTR MaLR 1 384 0 6 771 6465 72 46 5 chr15 24454277 24455152 -79039822 - L1_Mus1 LINE L1 0 6567 5657 6 771 1309 285 49 32 chr15 24455376 24456255 -79038719 - Lx5 LINE L1 -76 6974 6159 6 771 1162 260 78 55 chr15 24456704 24457193 -79037781 - MT2B LTR ERVL 0 601 13 6 771 249 269 216 12 chr15 24457250 24457412 -79037562 + B2_Mm2 SINE B2 1 195 0 6 771 256 340 142 91 chr15 24458081 24458544 -79036430 - MT2A LTR ERVL -11 522 36 6 771 4717 51 3 2 chr15 24458544 24459130 -79035844 - LTRIS_Mus LTR ERV1 0 587 1 6 771 360 283 10 10 chr15 24459201 24459301 -79035673 - Lx8 LINE L1 -1106 6367 6268 6 771 225 0 0 0 chr15 24459307 24459332 -79035642 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 6 771 4933 171 81 21 chr15 24459397 24460419 -79034555 + RLTR25A LTR ERVK 1 1083 -20 6 771 470 257 96 26 chr15 24460427 24460493 -79034481 + Lx8 LINE L1 6363 6429 -1044 6 771 744 12 0 0 chr15 24460493 24460578 -79034396 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 6 771 470 257 96 26 chr15 24460578 24460667 -79034307 + Lx8 LINE L1 6430 6529 -944 6 771 449 340 60 23 chr15 24460654 24460871 -79034103 + Lx8 LINE L1 6669 6893 -580 6 771 1069 134 48 5 chr15 24460873 24461060 -79033914 + IAPEY3_LTR LTR ERVK 138 332 0 6 771 469 340 121 21 chr15 24461065 24461579 -79033395 + Lx8 LINE L1 6907 7471 -2 6 771 2504 49 61 9 chr15 24462330 24462659 -79032315 - ORR1A1 LTR MaLR 0 346 1 6 771 1150 58 0 0 chr15 24462895 24463033 -79031941 + B1_Mus1 SINE Alu 2 139 -9 6 771 368 0 43 0 chr15 24463033 24463080 -79031894 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 6 771 258 333 13 13 chr15 24464053 24464132 -79030842 + ID2 SINE ID 2 80 -3 6 771 281 355 21 28 chr15 24465317 24465462 -79029512 + MLT1A1 LTR MaLR 256 399 -9 6 771 405 303 147 11 chr15 24465462 24465639 -79029335 + MLT2B1 LTR ERVL 47 247 -273 6 771 1396 91 19 0 chr15 24466187 24466396 -79028578 + L1_Mus3 LINE L1 6424 6636 -2 6 771 482 0 17 0 chr15 24466418 24466476 -79028498 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 6 771 674 336 35 15 chr15 24467840 24468100 -79026874 - ERVL-int LTR ERVL -2608 3149 2885 6 771 688 336 47 20 chr15 24468465 24468808 -79026166 - ERVL-int LTR ERVL -3938 1819 1468 6 771 315 0 0 0 chr15 24468879 24468914 -79026060 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 771 369 62 0 0 chr15 24468914 24468961 -79026013 + (TA)n Simple_repeat Simple_repeat 2 49 0 6 771 424 286 52 45 chr15 24469248 24469402 -79025572 - Tigger7 DNA MER2_type -2080 411 257 6 771 347 250 102 0 chr15 24470023 24470151 -79024823 - ERVL-int LTR ERVL -5106 608 468 6 771 332 322 20 39 chr15 24470313 24470517 -79024457 + L1M5 LINE L1 3723 3923 -2223 6 771 206 194 0 16 chr15 24470589 24470652 -79024322 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 6 771 383 110 0 35 chr15 24470804 24470889 -79024085 + (A)n Simple_repeat Simple_repeat 1 82 0 6 771 860 112 0 7 chr15 24471842 24471977 -79022997 + L1_Mus2 LINE L1 6433 6566 0 6 771 8627 6 0 5 chr15 24472080 24473049 -79021925 + L1Md_T LINE L1 5618 6581 -1 6 771 312 27 0 0 chr15 24473852 24473889 -79021085 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 771 1074 324 142 76 chr15 24474063 24474386 -79020588 - Lx8 LINE L1 -247 7226 6860 6 771 253 214 0 18 chr15 24474386 24474443 -79020531 + MTD LTR MaLR 104 159 -260 6 771 1074 324 142 76 chr15 24474443 24474935 -79020039 - Lx8 LINE L1 -247 6859 6297 6 771 1148 284 29 34 chr15 24474959 24475324 -79019650 + MTD LTR MaLR 24 388 -31 6 771 207 0 0 0 chr15 24475324 24475347 -79019627 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 6 771 1148 284 29 34 chr15 24475347 24475367 -79019607 + MTD LTR MaLR 389 406 -13 6 771 528 16 0 0 chr15 24475477 24475538 -79019436 + (TC)n Simple_repeat Simple_repeat 2 62 0 6 771 291 114 0 0 chr15 24475538 24475581 -79019393 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 771 2369 87 12 3 chr15 24478477 24478801 -79016173 + ORR1A2 LTR MaLR 1 327 0 6 771 1562 223 82 0 chr15 24478981 24479335 -79015639 + Lx9 LINE L1 6549 6931 -713 6 771 1506 276 82 22 chr15 24479368 24479954 -79015020 + Lx9 LINE L1 7024 7644 0 6 771 21 0 0 0 chr15 24480647 24480668 -79014306 + AT_rich Low_complexity Low_complexity 1 21 0 6 771 315 0 0 0 chr15 24483439 24483474 -79011500 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 771 342 67 0 0 chr15 24484567 24484612 -79010362 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 771 354 74 0 0 chr15 24484612 24484666 -79010308 + (GA)n Simple_repeat Simple_repeat 1 54 0 7 771 232 342 25 0 chr15 24484810 24484889 -79010085 + ID SINE ID 3 83 -141 7 771 261 268 0 0 chr15 24484946 24485017 -79009957 - Lx6 LINE L1 -41 7419 7349 7 771 1736 207 70 17 chr15 24485054 24485467 -79009507 + RMER10A LTR ERVL 3 437 -5 7 771 2591 99 0 3 chr15 24485485 24485858 -79009116 + Lx LINE L1 6283 6654 0 7 771 1619 250 51 37 chr15 24485859 24486287 -79008687 - Lx6 LINE L1 -185 7275 6842 7 771 218 219 31 0 chr15 24486503 24486567 -79008407 + (CA)n Simple_repeat Simple_repeat 1 66 0 7 771 749 309 80 39 chr15 24487785 24488508 -79006466 + L1_Rod LINE L1 1203 1955 -3892 7 771 812 312 86 43 chr15 24488602 24489115 -79005859 + Lx8 LINE L1 6037 6571 -902 7 771 308 352 166 12 chr15 24489166 24489569 -79005405 + Lx8 LINE L1 6660 7124 -349 7 771 227 338 62 38 chr15 24489581 24489661 -79005313 + B3A SINE B2 1 82 -116 7 771 602 271 128 12 chr15 24489881 24490129 -79004845 + MTD LTR MaLR 6 285 -134 7 771 409 301 69 53 chr15 24490141 24490387 -79004587 + L1MA6 LINE L1 5613 5862 -438 7 771 1309 267 36 17 chr15 24490446 24490857 -79004117 - MTD LTR MaLR 0 419 1 7 771 811 357 28 18 chr15 24491311 24491596 -79003378 + B4A SINE B4 5 292 0 7 771 396 0 0 0 chr15 24491627 24491671 -79003303 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 771 6648 85 7 6 chr15 24493426 24494339 -79000635 - Lx3_Mus LINE L1 -6 7003 6090 7 771 2044 262 99 19 chr15 24494536 24495170 -78999804 - MTC-int LTR MaLR -194 1064 380 7 771 2596 81 0 53 chr15 24495296 24495689 -78999285 - L1Md_F2 LINE L1 -2 6580 6209 7 771 213 65 0 0 chr15 24496329 24496360 -78998614 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 771 2426 88 34 3 chr15 24498234 24498585 -78996389 + L1Md_F2 LINE L1 6206 6567 -15 7 771 291 28 0 0 chr15 24499223 24499259 -78995715 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 771 355 266 130 9 chr15 24499469 24499685 -78995289 + L1MA7 LINE L1 5932 6173 -118 7 771 590 242 23 149 chr15 24500001 24500215 -78994759 + MT2A LTR ERVL 38 224 -309 1 771 228 67 0 0 chr15 24500259 24500289 -78994685 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 771 4089 53 2 0 chr15 24500379 24500886 -78994088 - L1Md_F2 LINE L1 0 6582 6075 3 771 795 148 21 17 chr15 24501480 24501715 -78993259 + (TATG)n Simple_repeat Simple_repeat 1 235 0 4 771 1292 249 56 11 chr15 24501733 24502091 -78992883 - ORR1C1 LTR MaLR 0 378 5 5 771 595 263 142 49 chr15 24502107 24502395 -78992579 - Lx9 LINE L1 -127 7517 7203 6 771 4710 112 17 1 chr15 24502892 24503599 -78991375 + L1_Mus3 LINE L1 5919 6636 -2 7 771 921 223 22 44 chr15 24503642 24503867 -78991107 - Lx9 LINE L1 -431 7213 6994 6 771 722 214 2 2 chr15 24503867 24504362 -78990612 + GA-rich Low_complexity Low_complexity 1 495 0 8 771 26 0 0 0 chr15 24504792 24504818 -78990156 + AT_rich Low_complexity Low_complexity 1 26 0 9 771 26 0 0 0 chr15 24504875 24504901 -78990073 + AT_rich Low_complexity Low_complexity 1 26 0 1 771 7421 181 38 10 chr15 24504912 24506536 -78988438 - Lx4B LINE L1 -4 7054 5369 1 771 262 370 0 8 chr15 24507115 24507128 -78987846 + ID_B1 SINE B4 81 198 -25 1 771 529 226 0 0 chr15 24507128 24507234 -78987740 + B1_Mus1 SINE Alu 14 119 -29 1 771 946 115 17 11 chr15 24507235 24507411 -78987563 + (GAA)n Simple_repeat Simple_repeat 3 179 0 1 771 603 40 0 0 chr15 24507414 24507488 -78987486 + (GAGAA)n Simple_repeat Simple_repeat 1 74 0 1 771 1964 98 52 0 chr15 24507841 24508128 -78986846 - L1_Mus4 LINE L1 -1 6635 6334 1 771 3166 118 74 25 chr15 24508401 24508931 -78986043 - Lx LINE L1 0 6654 6099 1 771 2391 136 25 0 chr15 24508934 24509302 -78985672 + L1_Mm LINE L1 5453 5829 -54 1 771 483 63 0 0 chr15 24509754 24509817 -78985157 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 771 253 404 6 31 chr15 24509845 24510006 -78984968 - RSINE1 SINE B4 -5 160 4 2 771 540 0 0 0 chr15 24510392 24510452 -78984522 + (GA)n Simple_repeat Simple_repeat 2 61 0 2 772 274 299 171 0 chr15 24510785 24510902 -78984072 + ID_B1 SINE B4 79 215 -9 2 772 2440 68 3 69 chr15 24511087 24511437 -78983537 - ORR1A2 LTR MaLR 0 327 1 2 772 387 282 117 78 chr15 24511939 24512170 -78982804 + MLT2B4 LTR ERVL 1 240 -280 2 772 240 250 0 0 chr15 24512201 24512253 -78982721 - B3A SINE B2 -145 53 2 2 772 1929 118 31 9 chr15 24512341 24512665 -78982309 - IAPEY_LTR LTR ERVK 0 385 55 2 772 3825 49 4 30 chr15 24512975 24513479 -78981495 + L1Md_F2 LINE L1 6090 6580 -2 2 772 1836 171 36 124 chr15 24513707 24514208 -78980766 - RMER6C LTR ERVK -28 662 206 2 772 3752 67 17 2 chr15 24514226 24514708 -78980266 + L1_Mus1 LINE L1 6077 6565 -2 2 772 210 176 0 0 chr15 24514724 24514775 -78980199 + A-rich Low_complexity Low_complexity 1 51 0 3 772 851 126 0 34 chr15 24514820 24514968 -78980006 + RMER6C LTR ERVK 442 584 -106 3 772 271 258 0 16 chr15 24515482 24515545 -78979429 - MTE2a LTR MaLR -261 118 57 3 772 3876 50 0 8 chr15 24516823 24517303 -78977671 + L1Md_F2 LINE L1 6095 6570 -12 3 772 227 196 0 0 chr15 24517541 24517611 -78977363 + (CATATA)n Simple_repeat Simple_repeat 1 70 0 3 772 195 322 0 0 chr15 24517612 24517699 -78977275 + A-rich Low_complexity Low_complexity 6 92 0 3 772 315 130 0 0 chr15 24517701 24517755 -78977219 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 772 306 0 0 0 chr15 24518359 24518393 -78976581 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 772 1041 54 0 0 chr15 24518393 24518522 -78976452 - B1_Mm SINE Alu -9 138 10 3 772 275 255 224 0 chr15 24519788 24519886 -78975088 + B3 SINE B2 84 203 -13 3 772 1554 210 92 10 chr15 24519893 24520218 -78974756 + RMER1B Other Other 400 871 -195 4 772 5052 76 4 7 chr15 24520218 24520907 -78974067 + L1Md_F2 LINE L1 5888 6574 -8 4 772 1554 205 97 11 chr15 24520907 24520980 -78973994 + RMER1B Other Other 872 948 -118 4 772 26 30 0 0 chr15 24520982 24521015 -78973959 + AT_rich Low_complexity Low_complexity 1 33 0 4 772 459 247 12 49 chr15 24521016 24521178 -78973796 - RMER1B Other Other -24 1042 887 4 772 2026 278 113 14 chr15 24521242 24521889 -78973085 + Lx7 LINE L1 6560 7270 -426 4 772 519 104 0 40 chr15 24521926 24522026 -78972948 + (TCCC)n Simple_repeat Simple_repeat 2 97 0 4 772 21 0 0 0 chr15 24522202 24522223 -78972751 + AT_rich Low_complexity Low_complexity 1 21 0 4 772 926 279 56 4 chr15 24523641 24523907 -78971067 - Lx8 LINE L1 -385 7088 6809 4 772 468 309 136 60 chr15 24523912 24524243 -78970731 + Lx8 LINE L1 7116 7471 -2 4 772 553 344 81 16 chr15 24524559 24524869 -78970105 + Lx8 LINE L1 6961 7290 -183 4 772 652 107 18 0 chr15 24524965 24525077 -78969897 + (GGAA)n Simple_repeat Simple_repeat 3 116 0 4 772 300 329 33 0 chr15 24525839 24525960 -78969014 + MLT1B LTR MaLR 261 462 -5 5 772 198 103 0 0 chr15 24526291 24526320 -78968654 + (TTTTC)n Simple_repeat Simple_repeat 5 33 0 5 772 653 126 429 18 chr15 24527345 24527562 -78967412 + Lx LINE L1 6346 6651 -3 5 772 489 270 25 12 chr15 24528511 24528647 -78966327 - B3A SINE B2 -29 166 34 5 772 593 61 12 0 chr15 24530521 24530603 -78964371 + (TAGA)n Simple_repeat Simple_repeat 1 83 0 5 772 699 303 52 33 chr15 24530754 24531024 -78963950 - MTEb LTR MaLR -2 377 103 5 772 498 17 0 0 chr15 24531027 24531086 -78963888 + (TATG)n Simple_repeat Simple_repeat 2 60 0 5 772 1017 99 7 7 chr15 24531087 24531239 -78963735 - B2_Mm2 SINE B2 -41 154 3 5 772 305 355 54 9 chr15 24531241 24531352 -78963622 - MTEb LTR MaLR -263 116 1 5 772 393 22 0 0 chr15 24532479 24532525 -78962449 + (TC)n Simple_repeat Simple_repeat 2 47 0 5 772 252 0 0 0 chr15 24532525 24532552 -78962422 + (TA)n Simple_repeat Simple_repeat 1 28 0 5 772 748 20 10 10 chr15 24532773 24532872 -78962102 + (TTTC)n Simple_repeat Simple_repeat 3 101 0 6 772 1068 88 0 0 chr15 24532873 24533009 -78961965 - B1_Mus1 SINE Alu -11 137 2 6 772 23 0 0 0 chr15 24533270 24533293 -78961681 + AT_rich Low_complexity Low_complexity 1 23 0 6 772 200 86 0 28 chr15 24533465 24533501 -78961473 + (TTA)n Simple_repeat Simple_repeat 3 37 0 6 772 918 101 0 0 chr15 24533898 24534047 -78960927 + (CA)n Simple_repeat Simple_repeat 1 149 0 6 772 1952 104 0 51 chr15 24534196 24534529 -78960445 + L1Md_Gf LINE L1 262 577 -5945 6 772 1176 41 0 0 chr15 24534529 24534674 -78960300 - L1_Mm LINE L1 -690 5193 5049 6 772 1375 0 0 0 chr15 24534661 24534816 -78960158 - L1_Mm LINE L1 -1989 3894 3740 6 772 21 0 0 0 chr15 24535637 24535658 -78959316 + AT_rich Low_complexity Low_complexity 1 21 0 6 772 2075 85 0 0 chr15 24535696 24535968 -78959006 + L1Md_F2 LINE L1 5992 6263 -319 6 772 1146 190 46 40 chr15 24535968 24536312 -78958662 + RLTR10E LTR ERVK 1 360 -5 6 772 2234 95 0 9 chr15 24536317 24536645 -78958329 + L1Md_F2 LINE L1 6258 6582 0 7 772 2285 242 73 120 chr15 24536671 24537580 -78957394 - Lx7 LINE L1 -70 7626 6761 7 772 213 108 0 0 chr15 24537580 24537617 -78957357 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 7 772 2447 181 147 17 chr15 24537617 24538203 -78956771 + RMER6C LTR ERVK 2 663 -27 7 772 3551 237 77 17 chr15 24538291 24539863 -78955111 - Lx7 LINE L1 -946 6750 5103 7 772 7043 89 5 2 chr15 24539845 24540960 -78954014 - L1Md_F2 LINE L1 -12 6570 5452 7 772 2842 117 40 4 chr15 24540956 24541732 -78953242 + L1VL1 LINE L1 1070 1922 -3955 7 772 6305 185 44 23 chr15 24541740 24542222 -78952752 - L1_Mur3 LINE L1 -788 5092 4623 7 772 291 71 0 0 chr15 24542222 24542264 -78952710 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 772 6305 185 44 23 chr15 24542264 24543225 -78951749 - L1_Mur3 LINE L1 -1258 4622 3619 7 772 2824 104 10 7 chr15 24543225 24543631 -78951343 + MTB_Mm LTR MaLR 1 407 0 7 772 1951 161 71 25 chr15 24543631 24544025 -78950949 + MTB_Mm-int LTR MaLR 1 412 -686 7 772 821 212 18 31 chr15 24544031 24544260 -78950714 - L1_Mur3 LINE L1 -6668 1060 835 7 772 353 238 25 0 chr15 24544320 24544442 -78950532 - L1_Mur3 LINE L1 -6769 959 835 7 772 857 240 29 5 chr15 24545144 24545353 -78949621 + MTC LTR MaLR 2 215 -206 7 772 2146 80 10 0 chr15 24545353 24545641 -78949333 - ORR1A2 LTR MaLR 0 327 37 8 772 767 294 92 4 chr15 24545752 24545991 -78948983 + MTC LTR MaLR 162 421 0 8 772 216 0 0 0 chr15 24546163 24546187 -78948787 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 8 772 535 213 269 34 chr15 24546272 24546447 -78948527 + B3 SINE B2 1 216 0 8 772 27 49 0 0 chr15 24546621 24546662 -78948312 + AT_rich Low_complexity Low_complexity 1 41 0 8 772 242 222 0 31 chr15 24547442 24547507 -78947467 - MLT1A1 LTR MaLR -345 63 1 8 772 24 32 0 0 chr15 24547550 24547581 -78947393 + AT_rich Low_complexity Low_complexity 1 31 0 8 772 4050 86 19 2 chr15 24547623 24548192 -78946782 + L1_Mus3 LINE L1 6059 6637 -1 8 772 297 275 137 40 chr15 24549226 24549453 -78945521 - L1MC3 LINE L1 -357 7525 7277 8 772 333 0 0 0 chr15 24549745 24549782 -78945192 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 772 306 0 0 0 chr15 24549865 24549899 -78945075 + (TG)n Simple_repeat Simple_repeat 2 35 0 9 772 239 326 19 104 chr15 24549934 24550024 -78944950 - RSINE1 SINE B4 -47 118 35 9 772 1693 157 30 56 chr15 24550024 24550362 -78944612 - ORR1A4 LTR MaLR 0 329 1 9 772 239 326 19 104 chr15 24550362 24550377 -78944597 - RSINE1 SINE B4 -131 34 22 9 772 288 20 40 20 chr15 24550537 24550587 -78944387 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 9 772 265 103 17 33 chr15 24550740 24550800 -78944174 + T-rich Low_complexity Low_complexity 4 62 0 9 772 213 39 0 0 chr15 24550940 24550966 -78944008 + (TTG)n Simple_repeat Simple_repeat 2 27 0 9 772 219 173 0 0 chr15 24551052 24551104 -78943870 + (TG)n Simple_repeat Simple_repeat 2 53 0 9 772 1307 247 87 20 chr15 24551137 24551530 -78943444 + MTD LTR MaLR 1 419 0 9 772 843 291 155 41 chr15 24551530 24552238 -78942736 - L1MA4 LINE L1 -370 5930 5116 9 772 281 302 57 57 chr15 24552284 24552512 -78942462 - L1MC3 LINE L1 -1333 6549 6322 8 772 376 347 92 28 chr15 24552603 24552994 -78941980 - L1MC3 LINE L1 -1626 6159 5744 8 772 294 198 29 10 chr15 24553897 24553999 -78940975 + GA-rich Low_complexity Low_complexity 2 105 0 9 772 1088 264 83 31 chr15 24554238 24554947 -78940027 - Lx7 LINE L1 -1474 6222 5492 1 772 362 254 75 23 chr15 24556355 24556488 -78938486 - RLTR15 LTR ERVK -214 145 6 1 772 296 345 88 25 chr15 24556619 24556893 -78938081 + Lx8 LINE L1 6981 7271 -202 1 772 330 307 118 11 chr15 24557501 24557679 -78937295 + B3A SINE B2 2 198 0 1 772 21 0 0 0 chr15 24558416 24558437 -78936537 + AT_rich Low_complexity Low_complexity 1 21 0 1 772 26 30 0 0 chr15 24558461 24558494 -78936480 + AT_rich Low_complexity Low_complexity 1 33 0 1 772 22 0 0 0 chr15 24559976 24559998 -78934976 + AT_rich Low_complexity Low_complexity 1 22 0 1 772 22 35 0 0 chr15 24560782 24560811 -78934163 + AT_rich Low_complexity Low_complexity 1 29 0 1 772 1886 186 106 17 chr15 24561492 24562225 -78932749 - Lx3C LINE L1 -3 7055 6167 1 772 2319 162 57 0 chr15 24562221 24562660 -78932314 - Lx3C LINE L1 -91 5795 5332 1 772 184 365 12 81 chr15 24563023 24563184 -78931790 + L2 LINE L2 2629 2778 -641 1 772 21 89 0 0 chr15 24563541 24563597 -78931377 + AT_rich Low_complexity Low_complexity 1 56 0 1 772 279 0 0 0 chr15 24565120 24565151 -78929823 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 772 255 191 0 0 chr15 24566193 24566256 -78928718 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 772 2797 53 41 26 chr15 24566749 24567139 -78927835 - MTA_Mm LTR MaLR 0 396 1 1 772 3617 142 20 8 chr15 24567201 24567859 -78927115 - Lx2B LINE L1 -645 6355 5690 1 772 2699 216 22 53 chr15 24567820 24568538 -78926436 + Lx2B LINE L1 6305 7000 0 1 772 387 335 57 39 chr15 24568542 24568825 -78926149 + L1MEc LINE L1 1874 2161 -4239 1 772 4445 66 2 42 chr15 24568898 24569516 -78925458 + L1Md_F2 LINE L1 5989 6581 -1 1 772 895 256 143 47 chr15 24570074 24570238 -78924736 - RMER5 LTR ERV1 -42 492 324 1 772 2665 70 75 3 chr15 24570238 24570609 -78924365 + MTB LTR MaLR 1 398 -2 1 772 895 256 143 47 chr15 24570609 24570871 -78924103 - RMER5 LTR ERV1 -211 323 25 1 772 22 0 0 0 chr15 24571859 24571881 -78923093 + AT_rich Low_complexity Low_complexity 1 22 0 1 772 37923 30 0 6 chr15 24572446 24578618 -78916356 - L1Md_A LINE L1 0 6582 452 1 772 940 199 227 99 chr15 24579275 24579711 -78915263 + RMER6C LTR ERVK 1 492 -198 1 772 376 276 152 0 chr15 24579926 24580031 -78914943 + RSINE1 SINE B4 1 121 -44 1 772 766 179 18 43 chr15 24580455 24580618 -78914356 + ORR1B2 LTR MaLR 118 276 -91 1 772 270 0 0 0 chr15 24580896 24580926 -78914048 + (TTA)n Simple_repeat Simple_repeat 1 30 0 1 772 7085 77 1 7 chr15 24580926 24581974 -78913000 - L1Md_F2 LINE L1 -23 6559 5518 1 772 256 149 0 0 chr15 24581973 24582020 -78912954 - L1_Mur2 LINE L1 -1183 4694 4648 1 772 1495 156 8 11 chr15 24582044 24582343 -78912631 - L1_Mm LINE L1 -1229 4654 4364 1 772 231 355 70 0 chr15 24582324 24582496 -78912478 - Lx8 LINE L1 -688 6785 6602 1 772 253 304 74 68 chr15 24582496 24582644 -78912330 + MER34A LTR ERV1 190 338 -233 1 772 31033 79 3 7 chr15 24583387 24588906 -78906068 + L1Md_F2 LINE L1 98 5590 -293 1 772 8175 40 0 1 chr15 24588908 24589887 -78905087 + L1Md_F2 LINE L1 5593 6570 -12 1 772 305 297 125 137 chr15 24591011 24591362 -78903612 + LTR16C LTR ERVL 141 487 -2 1 772 313 389 54 54 chr15 24591780 24592133 -78902841 + ORR1E LTR MaLR 7 359 0 1 772 3042 71 5 8 chr15 24592150 24592547 -78902427 + MTA_Mm LTR MaLR 1 396 0 1 772 38995 11 1 6 chr15 24592632 24599035 -78895939 - L1Md_A LINE L1 0 6582 214 1 772 243 122 0 0 chr15 24599740 24599789 -78895185 + (A)n Simple_repeat Simple_repeat 1 49 0 1 772 33537 78 2 13 chr15 24599936 24606078 -78888896 - L1Md_F2 LINE L1 -12 6570 501 1 772 1077 169 46 14 chr15 24607232 24607448 -78887526 + URR1A DNA MER1_type 3 225 -1 1 772 227 277 84 0 chr15 24608029 24608148 -78886826 - L1M3 LINE L1 -1799 4341 4213 1 772 2888 198 33 21 chr15 24608476 24609142 -78885832 + Lx2B LINE L1 6327 7000 0 1 772 183 314 45 62 chr15 24609500 24609612 -78885362 - MIR SINE MIR -43 219 110 1 772 1075 83 50 19 chr15 24609614 24609774 -78885200 + B2_Mm2 SINE B2 1 165 -30 1 772 1130 183 22 35 chr15 24609976 24610203 -78884771 - URR1B DNA MER1_type 0 225 2 1 772 336 24 0 0 chr15 24611483 24611524 -78883450 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 772 23 0 0 0 chr15 24612473 24612496 -78882478 + AT_rich Low_complexity Low_complexity 1 23 0 1 772 419 69 0 0 chr15 24612633 24612691 -78882283 - L1_Mm LINE L1 -300 5583 5526 1 772 3367 71 0 0 chr15 24612698 24613163 -78881811 - L1Md_F2 LINE L1 -1473 4410 3946 1 772 8714 72 3 0 chr15 24613160 24614355 -78880619 + L1Md_F2 LINE L1 4392 5590 -293 1 772 7981 48 3 6 chr15 24614357 24615348 -78879626 + L1Md_F2 LINE L1 5593 6580 -2 1 772 674 173 397 11 chr15 24615390 24615587 -78879387 + Lx4B LINE L1 6755 7027 -31 1 772 962 204 50 0 chr15 24615585 24615806 -78879168 - Lx4B LINE L1 -691 6367 6136 1 772 318 26 0 0 chr15 24615807 24615846 -78879128 + (TTA)n Simple_repeat Simple_repeat 3 41 0 1 772 4107 59 0 9 chr15 24615856 24616406 -78878568 - L1_Mus1 LINE L1 -24 6543 5999 1 772 3080 124 56 14 chr15 24616403 24617192 -78877782 - Lx4B LINE L1 -917 6141 5319 1 772 440 99 14 0 chr15 24617189 24617260 -78877714 + L1_Mur2 LINE L1 2095 2166 -3711 1 772 723 156 3 61 chr15 24617264 24617617 -78877357 + CT-rich Low_complexity Low_complexity 1 332 0 1 772 338 314 97 34 chr15 24617641 24618011 -78876963 - HAL1-3A_ME LINE L1 -417 2441 2284 1 772 978 123 12 6 chr15 24618035 24618207 -78876767 + (TCTCC)n Simple_repeat Simple_repeat 2 174 0 1 772 306 314 50 8 chr15 24618286 24618405 -78876569 - L1M4 LINE L1 -577 5597 5474 1 772 360 170 37 9 chr15 24618417 24618524 -78876450 - Lx4A LINE L1 -2 7056 6947 1 772 541 238 93 58 chr15 24618737 24618942 -78876032 + B3 SINE B2 4 215 -1 1 772 355 251 98 119 chr15 24618991 24619370 -78875604 - L1_Rod LINE L1 -2425 3422 3052 1 772 30436 87 6 16 chr15 24619368 24624575 -78870399 + L1Md_F2 LINE L1 217 5584 -299 1 772 7634 71 3 1 chr15 24624577 24625569 -78869405 + L1Md_F2 LINE L1 5587 6580 -2 1 772 481 283 69 29 chr15 24625581 24625930 -78869044 - L1_Rod LINE L1 -2784 3063 2701 1 772 790 283 62 23 chr15 24625926 24626233 -78868741 + Lx9 LINE L1 6919 7237 -407 1 772 271 281 58 35 chr15 24626380 24626553 -78868421 - Lx9 LINE L1 -1678 5966 5790 1 772 1112 259 91 60 chr15 24626569 24627217 -78867757 - Lx9 LINE L1 -556 5291 4624 1 772 216 309 12 24 chr15 24627316 24627399 -78867575 + CT-rich Low_complexity Low_complexity 1 82 0 1 772 212 184 38 38 chr15 24627548 24627627 -78867347 + (TTAA)n Simple_repeat Simple_repeat 3 81 0 1 772 1293 92 0 0 chr15 24628819 24629243 -78865731 + (TG)n Simple_repeat Simple_repeat 1 424 0 1 772 390 42 0 0 chr15 24630616 24630664 -78864310 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 772 23 0 0 0 chr15 24632349 24632372 -78862602 + AT_rich Low_complexity Low_complexity 1 23 0 1 772 3469 164 94 4 chr15 24632375 24633063 -78861911 - Lx4A LINE L1 -3 7055 6306 1 772 255 128 21 0 chr15 24633048 24633095 -78861879 - Lx4A LINE L1 -1048 6010 5963 1 772 3203 148 0 22 chr15 24633095 24633635 -78861339 - Lx LINE L1 0 6654 6127 1 772 4619 162 14 11 chr15 24633636 24634548 -78860426 + L1_Mur2 LINE L1 4264 5178 -699 1 772 816 134 41 30 chr15 24636237 24636406 -78858568 - Lx3B LINE L1 -1 6972 6802 1 772 431 328 67 33 chr15 24636406 24636575 -78858399 - MLT1E1A LTR MaLR -73 607 430 1 772 255 342 80 45 chr15 24636640 24636839 -78858135 - MLT1E1A LTR MaLR -446 208 3 1 772 940 164 6 6 chr15 24636954 24637120 -78857854 + URR1B DNA MER1_type 60 225 0 1 772 384 340 30 60 chr15 24637416 24637582 -78857392 - RSINE1 SINE B4 -2 163 3 1 772 30 0 0 0 chr15 24637624 24637654 -78857320 + AT_rich Low_complexity Low_complexity 1 30 0 1 772 387 0 0 0 chr15 24637724 24637767 -78857207 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 772 1121 216 0 0 chr15 24637830 24638061 -78856913 + L1Md_F2 LINE L1 400 630 -5986 1 772 20745 87 3 14 chr15 24638061 24641188 -78853786 + L1Md_F2 LINE L1 2493 5586 -297 1 96 7038 83 11 14 chr15 24641189 24642187 -78852787 + L1Md_F2 LINE L1 5588 6582 0 1 773 3647 79 2 12 chr15 24642300 24642798 -78852176 - L1Md_F2 LINE L1 -3 6579 6087 1 773 364 287 25 25 chr15 24643795 24643956 -78851018 + Lx8 LINE L1 7190 7350 -123 1 773 741 197 0 0 chr15 24644083 24644210 -78850764 + ORR1C1 LTR MaLR 169 295 -83 1 773 2697 164 51 55 chr15 24644214 24644695 -78850279 + L1_Mus2 LINE L1 589 1083 -5533 1 773 1051 39 24 55 chr15 24644695 24644859 -78850115 - L1Md_F3 LINE L1 0 6584 6426 1 773 5266 112 19 39 chr15 24644859 24645925 -78849049 + L1_Mus2 LINE L1 1084 2113 -3770 1 773 6735 78 46 2 chr15 24645922 24647182 -78847792 + L1_Mus2 LINE L1 5239 6566 0 1 773 560 376 122 36 chr15 24647627 24648048 -78846926 - MLT1E2 LTR MaLR -9 618 159 1 773 1088 242 54 0 chr15 24649066 24649306 -78845668 - MTC LTR MaLR -166 255 3 1 773 323 290 30 8 chr15 24650773 24650905 -78844069 - L1MB1 LINE L1 -198 6102 5968 1 773 891 28 0 0 chr15 24651824 24651930 -78843044 + (TA)n Simple_repeat Simple_repeat 2 107 0 1 773 829 279 73 47 chr15 24652038 24652914 -78842060 - L1MB1 LINE L1 -309 5880 4958 1 773 357 24 0 0 chr15 24653262 24653304 -78841670 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 773 436 273 70 36 chr15 24653309 24653519 -78841455 - MTD-int LTR MaLR -930 328 112 1 773 2065 122 9 15 chr15 24654912 24655254 -78839720 - Lx LINE L1 -3 6651 6312 1 773 549 264 29 70 chr15 24655268 24655439 -78839535 - MTD-int LTR MaLR -1094 164 1 1 773 667 236 165 72 chr15 24655439 24655724 -78839250 - MTD LTR MaLR 0 419 109 1 773 24 53 0 0 chr15 24656326 24656364 -78838610 + AT_rich Low_complexity Low_complexity 1 38 0 1 773 32261 73 13 4 chr15 24657270 24663386 -78831588 - L1Md_F2 LINE L1 -6 6576 399 1 773 1799 128 41 109 chr15 24664354 24664794 -78830180 - RMER17C LTR ERVK 0 410 1 1 773 4863 78 6 5 chr15 24665465 24666124 -78828850 - Lx3A LINE L1 -7 6974 6315 1 773 574 339 81 39 chr15 24666732 24667156 -78827818 + Charlie1a DNA MER1_type 139 582 -873 1 773 288 0 0 0 chr15 24667156 24667188 -78827786 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 773 574 339 81 39 chr15 24667188 24667281 -78827693 + Charlie1a DNA MER1_type 583 678 -777 1 773 180 111 0 0 chr15 24667362 24667389 -78827585 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 773 358 308 4 82 chr15 24668769 24668885 -78826089 + B3A SINE B2 78 182 -34 1 773 26 30 0 0 chr15 24669077 24669110 -78825864 + AT_rich Low_complexity Low_complexity 1 33 0 1 773 7619 67 0 3 chr15 24669222 24670859 -78824115 - L1Md_F2 LINE L1 -12 6570 4940 1 773 9608 70 1 2 chr15 24670856 24672140 -78822834 + L1Md_F2 LINE L1 3646 4927 -956 1 773 376 316 51 7 chr15 24673010 24673147 -78821827 - MIR3 SINE MIR -32 176 34 2 773 259 324 0 0 chr15 24674089 24674157 -78820817 - ID4_ SINE ID -11 72 5 2 773 579 294 39 14 chr15 24674765 24674972 -78820002 + Lx8 LINE L1 6905 7116 -357 2 773 426 20 0 0 chr15 24675133 24675184 -78819790 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 773 545 246 40 40 chr15 24675580 24675728 -78819246 + Lx8 LINE L1 7114 7261 -212 2 773 303 312 116 43 chr15 24675778 24675942 -78819032 + HAL1-3A_ME LINE L1 2277 2452 -406 2 773 242 231 88 25 chr15 24675970 24676050 -78818924 + Lx8 LINE L1 7382 7466 -7 2 773 229 260 0 0 chr15 24676273 24676323 -78818651 + G-rich Low_complexity Low_complexity 6 55 0 2 773 399 73 0 0 chr15 24676714 24676769 -78818205 + (CATA)n Simple_repeat Simple_repeat 2 56 0 2 773 28 95 0 0 chr15 24676891 24676975 -78817999 + AT_rich Low_complexity Low_complexity 1 84 0 2 773 496 368 13 0 chr15 24677794 24677946 -78817028 - RSINE1 SINE B4 -1 164 11 2 773 321 139 306 27 chr15 24678456 24678567 -78816407 + B1_Mus1 SINE Alu 6 147 -1 2 773 296 298 178 66 chr15 24678838 24679143 -78815831 + ORR1E LTR MaLR 11 369 -1 2 773 213 224 29 15 chr15 24679679 24679747 -78815227 + (TA)n Simple_repeat Simple_repeat 1 69 0 2 773 276 333 81 41 chr15 24682368 24682565 -78812409 + MER3 DNA MER1_type 5 209 0 2 773 23 0 0 0 chr15 24683372 24683395 -78811579 + AT_rich Low_complexity Low_complexity 1 23 0 2 773 243 0 0 0 chr15 24684191 24684218 -78810756 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 2 773 400 262 162 51 chr15 24684438 24684691 -78810283 - LTR50 LTR ERVL -503 292 12 2 773 234 220 0 0 chr15 24684712 24684771 -78810203 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 773 647 154 0 0 chr15 24684856 24684960 -78810014 + BC1_Mm scRNA scRNA 2 105 -47 2 773 419 267 54 7 chr15 24686087 24686234 -78808740 + Lx2B LINE L1 6838 6991 -9 2 773 1147 97 11 0 chr15 24686234 24686410 -78808564 + (GAA)n Simple_repeat Simple_repeat 2 179 0 2 773 258 32 0 0 chr15 24686410 24686441 -78808533 + (GGA)n Simple_repeat Simple_repeat 1 31 0 2 773 448 209 35 0 chr15 24686925 24687011 -78807963 + Lx7 LINE L1 7213 7301 -395 2 773 3639 171 12 29 chr15 24687035 24687765 -78807209 - L1_Mur2 LINE L1 -1346 4531 3814 2 773 3793 172 16 3 chr15 24687762 24688542 -78806432 + Lx2B LINE L1 5188 5975 -1083 2 773 2416 143 185 2 chr15 24688541 24689012 -78805962 + Lx LINE L1 6090 6646 -8 2 773 1052 80 0 0 chr15 24689023 24689160 -78805814 + B1_Mus1 SINE Alu 3 139 -9 2 773 1014 9 0 0 chr15 24689161 24689276 -78805698 + (GAA)n Simple_repeat Simple_repeat 1 115 0 2 773 4078 209 43 21 chr15 24689279 24690250 -78804724 + Lx2B LINE L1 6006 6998 -2 2 773 37317 19 2 8 chr15 24690349 24695531 -78799443 + L1Md_A LINE L1 441 5586 -297 2 773 8211 41 2 0 chr15 24695531 24696525 -78798449 + L1Md_A LINE L1 5587 6582 0 2 773 267 103 0 0 chr15 24697028 24697067 -78797907 + (TA)n Simple_repeat Simple_repeat 2 40 0 2 773 557 232 79 40 chr15 24697722 24697885 -78797089 - B3 SINE B2 0 216 42 2 773 30 0 0 0 chr15 24697903 24697933 -78797041 + AT_rich Low_complexity Low_complexity 1 30 0 2 773 2294 81 0 0 chr15 24699128 24699435 -78795539 - L1_Mus4 LINE L1 -702 5934 5628 2 773 2365 88 12 0 chr15 24699434 24699765 -78795209 - Lx LINE L1 -644 6010 5676 2 773 7013 97 8 1 chr15 24699765 24701322 -78793652 + L1_Mus4 LINE L1 5069 6636 0 2 773 21 36 0 0 chr15 24701325 24701353 -78793621 + AT_rich Low_complexity Low_complexity 1 28 0 2 773 411 21 0 0 chr15 24701386 24701434 -78793540 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 2 773 492 254 103 0 chr15 24701434 24701560 -78793414 - ORR1D1 LTR MaLR -235 139 1 2 773 402 277 68 52 chr15 24701567 24701815 -78793159 + Lx7 LINE L1 5986 6237 -1459 2 773 414 0 0 0 chr15 24702011 24702057 -78792917 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 773 468 0 0 0 chr15 24702057 24702108 -78792866 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 773 33 0 0 0 chr15 24703000 24703033 -78791941 + AT_rich Low_complexity Low_complexity 1 33 0 2 773 1147 183 100 0 chr15 24703033 24703273 -78791701 - Lx3C LINE L1 -2 6974 6711 2 773 4549 212 55 24 chr15 24704368 24705360 -78789614 + Lx5 LINE L1 5962 6984 -66 2 773 293 290 0 0 chr15 24706201 24706263 -78788711 - Lx8 LINE L1 -136 7337 7276 2 773 255 222 0 53 chr15 24709546 24709660 -78785314 + (TCTCTG)n Simple_repeat Simple_repeat 2 109 0 2 773 1744 203 81 10 chr15 24710115 24710508 -78784466 + MTC LTR MaLR 1 421 0 2 773 355 287 45 12 chr15 24710573 24710735 -78784239 - Lx8 LINE L1 -1716 5980 5814 2 773 234 0 0 0 chr15 24710739 24710765 -78784209 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 773 624 27 0 0 chr15 24710765 24710839 -78784135 + (GA)n Simple_repeat Simple_repeat 1 74 0 2 773 756 285 129 47 chr15 24710844 24711360 -78783614 + Lx8 LINE L1 6193 6748 -948 2 773 207 0 0 0 chr15 24711364 24711387 -78783587 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 773 611 355 23 13 chr15 24711394 24711713 -78783261 + Lx8 LINE L1 6778 7098 -598 2 773 4326 171 39 105 chr15 24711737 24711848 -78783126 - RMER19B LTR ERVK 0 902 793 2 773 4190 55 7 11 chr15 24711848 24712396 -78782578 + L1Md_F2 LINE L1 6037 6582 0 2 773 4326 171 39 105 chr15 24712396 24713249 -78781725 - RMER19B LTR ERVK -110 792 3 2 773 21 36 0 0 chr15 24713545 24713573 -78781401 + AT_rich Low_complexity Low_complexity 1 28 0 2 773 387 344 52 21 chr15 24713794 24714082 -78780892 - Lx8 LINE L1 -202 7271 6975 2 773 4564 264 70 35 chr15 24714290 24714863 -78780111 - Lx6 LINE L1 -1 7459 6884 2 773 396 0 0 0 chr15 24714863 24714907 -78780067 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 773 4564 264 70 35 chr15 24714907 24715012 -78779962 - Lx6 LINE L1 -577 6883 6768 2 773 282 56 0 0 chr15 24715012 24715048 -78779926 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 2 773 4564 264 70 35 chr15 24715048 24715068 -78779906 - Lx6 LINE L1 -693 6767 6743 2 773 297 51 0 0 chr15 24715068 24715107 -78779867 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 2 773 4564 264 70 35 chr15 24715107 24715704 -78779270 - Lx6 LINE L1 -718 6742 6117 2 773 199 363 38 87 chr15 24715812 24715996 -78778978 - MIRc SINE MIR -60 208 34 2 773 856 269 19 19 chr15 24716607 24716812 -78778162 - B3 SINE B2 -7 209 5 2 773 31 68 0 0 chr15 24716927 24716986 -78777988 + AT_rich Low_complexity Low_complexity 1 59 0 2 773 203 0 37 0 chr15 24717074 24717101 -78777873 + (TAA)n Simple_repeat Simple_repeat 2 29 0 2 773 238 270 0 0 chr15 24717330 24717404 -78777570 + T-rich Low_complexity Low_complexity 1 74 0 2 773 549 76 0 0 chr15 24717660 24717739 -78777235 + (TG)n Simple_repeat Simple_repeat 2 80 0 2 773 327 240 37 83 chr15 24719254 24719272 -78775702 + ORR1A3-int LTR MaLR 601 613 -1350 2 773 1358 207 306 7 chr15 24719272 24719680 -78775294 + MT2B LTR ERVL 1 530 -71 2 773 249 33 0 0 chr15 24719680 24719710 -78775264 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 773 546 310 93 66 chr15 24721040 24721554 -78773420 + L1MC1 LINE L1 5547 6074 -259 2 773 34 65 0 0 chr15 24721560 24721622 -78773352 + AT_rich Low_complexity Low_complexity 1 62 0 2 773 243 214 20 39 chr15 24721700 24721802 -78773172 + A-rich Low_complexity Low_complexity 3 102 0 2 773 1505 185 44 117 chr15 24721988 24722361 -78772613 - Lx6 LINE L1 -158 7538 6937 2 773 271 245 106 0 chr15 24722348 24722442 -78772532 + L1MC2 LINE L1 6068 6171 -173 2 773 305 265 47 35 chr15 24724453 24724539 -78770435 + MIR3 SINE MIR 110 196 -12 2 773 28 0 0 0 chr15 24724918 24724946 -78770028 + AT_rich Low_complexity Low_complexity 1 28 0 2 773 220 27 0 51 chr15 24725289 24725328 -78769646 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2 773 1890 121 69 9 chr15 24725613 24725946 -78769028 - BGLII_Mus LTR ERVK 0 422 70 2 773 38 22 0 0 chr15 24726023 24726068 -78768906 + AT_rich Low_complexity Low_complexity 1 45 0 2 773 205 177 49 25 chr15 24726076 24726157 -78768817 + (TATAA)n Simple_repeat Simple_repeat 5 87 0 2 773 519 264 53 82 chr15 24727604 24727810 -78767164 - Lx6 LINE L1 -58 7402 7203 2 773 402 21 0 0 chr15 24727843 24727890 -78767084 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 773 430 331 34 27 chr15 24727900 24728049 -78766925 - RSINE1 SINE B4 -14 151 2 2 773 284 139 26 65 chr15 24728396 24728472 -78766502 + U2 snRNA snRNA 1 73 -115 2 773 1553 271 32 12 chr15 24728472 24728876 -78766098 - MTD LTR MaLR -2 417 6 2 773 303 191 32 0 chr15 24728880 24728943 -78766031 + Lx5 LINE L1 6265 6329 -721 2 773 1320 120 0 0 chr15 24729007 24729199 -78765775 - B2_Mm2 SINE B2 -3 192 1 2 773 402 21 0 0 chr15 24729203 24729250 -78765724 + (T)n Simple_repeat Simple_repeat 1 47 0 2 773 5480 111 77 63 chr15 24729571 24730630 -78764344 - L1_Mus2 LINE L1 0 6566 5494 2 773 22 0 0 0 chr15 24730641 24730663 -78764311 + AT_rich Low_complexity Low_complexity 1 22 0 2 773 34503 60 2 15 chr15 24731279 24736426 -78758548 + L1Md_A LINE L1 511 5586 -297 2 773 8766 10 0 0 chr15 24736426 24737455 -78757519 + L1Md_A LINE L1 5587 6582 0 2 773 251 0 0 0 chr15 24737455 24737486 -78757488 + L1Md_F2 LINE L1 4836 4866 -1017 2 773 4074 40 0 0 chr15 24737500 24737995 -78756979 + L1Md_F2 LINE L1 5092 5586 -297 2 773 8040 50 3 2 chr15 24737995 24738990 -78755984 + L1Md_F2 LINE L1 5587 6582 0 2 773 739 237 86 0 chr15 24739163 24739349 -78755625 - B3 SINE B2 -10 206 5 2 773 21 0 0 0 chr15 24739367 24739388 -78755586 + AT_rich Low_complexity Low_complexity 1 21 0 2 773 290 227 43 43 chr15 24739388 24739480 -78755494 - Lx7 LINE L1 -2 7694 7603 2 773 468 0 0 0 chr15 24739495 24739547 -78755427 + (TC)n Simple_repeat Simple_repeat 1 52 0 2 773 387 0 0 0 chr15 24739547 24739589 -78755385 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 773 1461 223 69 23 chr15 24739607 24739997 -78754977 - Lx7 LINE L1 -175 7521 7114 2 773 265 372 56 20 chr15 24740065 24740260 -78754714 + MLT1C LTR MaLR 193 394 -73 2 773 468 349 53 66 chr15 24740255 24740559 -78754415 - MLT1B LTR MaLR -22 368 69 2 773 4073 132 13 11 chr15 24740559 24741182 -78753792 - Lx2A1 LINE L1 -62 6946 6323 2 773 858 139 48 6 chr15 24741178 24741344 -78753630 + L1_Mur2 LINE L1 5154 5326 -551 2 773 429 327 69 72 chr15 24741402 24741692 -78753282 - B4 SINE B4 -3 289 1 2 773 288 53 0 0 chr15 24742943 24742981 -78751993 + (TTTTTA)n Simple_repeat Simple_repeat 2 39 0 3 773 31 58 0 0 chr15 24743098 24743150 -78751824 + AT_rich Low_complexity Low_complexity 1 52 0 3 773 28 48 0 0 chr15 24743438 24743480 -78751494 + AT_rich Low_complexity Low_complexity 1 42 0 3 773 813 269 109 26 chr15 24744597 24744937 -78750037 - ORR1D2 LTR MaLR -2 368 1 3 773 341 341 21 14 chr15 24744937 24745077 -78749897 + Lx8 LINE L1 7220 7360 -113 3 773 1961 175 207 57 chr15 24745084 24745512 -78749462 + RMER6C LTR ERVK 1 466 -224 3 773 776 127 111 0 chr15 24745512 24745638 -78749336 + B1_Mus1 SINE Alu 1 140 -8 3 773 738 0 0 0 chr15 24745643 24745725 -78749249 + (GAA)n Simple_repeat Simple_repeat 2 83 0 3 773 1961 175 207 57 chr15 24745725 24745890 -78749084 + RMER6C LTR ERVK 487 689 -1 3 773 205 89 22 22 chr15 24746229 24746275 -78748699 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 773 342 0 0 0 chr15 24747200 24747238 -78747736 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 773 431 338 107 19 chr15 24747370 24747575 -78747399 - B4A SINE B4 -67 225 3 3 773 38 22 0 0 chr15 24747577 24747622 -78747352 + AT_rich Low_complexity Low_complexity 1 45 0 3 773 2680 66 0 24 chr15 24747642 24748016 -78746958 - L1Md_F2 LINE L1 0 6582 6218 3 773 1766 226 54 23 chr15 24748505 24748895 -78746079 - MTD LTR MaLR 0 419 18 3 773 600 276 6 6 chr15 24750292 24750456 -78744518 - U1 snRNA snRNA 0 165 2 3 773 333 0 0 0 chr15 24751447 24751484 -78743490 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 773 1231 282 76 84 chr15 24751496 24752112 -78742862 - RMER19C LTR ERVK 0 611 1 3 773 7987 53 0 5 chr15 24752461 24753533 -78741441 - L1Md_F2 LINE L1 0 6582 5516 3 773 3003 87 6 1 chr15 24753530 24754037 -78740937 + L1Md_F2 LINE L1 4740 5487 -396 3 773 303 93 0 0 chr15 24754643 24754686 -78740288 + (TTA)n Simple_repeat Simple_repeat 2 44 0 3 773 583 365 68 15 chr15 24755195 24755532 -78739442 + MLT1A0 LTR MaLR 11 365 0 3 773 482 79 13 0 chr15 24755581 24755657 -78739317 + (TG)n Simple_repeat Simple_repeat 2 78 0 3 773 426 383 26 31 chr15 24755685 24755914 -78739060 - B4A SINE B4 -1 291 64 3 773 22 35 0 0 chr15 24757066 24757095 -78737879 + AT_rich Low_complexity Low_complexity 1 29 0 3 773 243 61 0 0 chr15 24757461 24757494 -78737480 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 3 773 234 253 47 81 chr15 24757745 24757831 -78737143 - MER50B LTR ERV1 -523 174 92 3 773 237 333 74 34 chr15 24758431 24758580 -78736394 - MER58B DNA MER1_type -24 317 163 3 773 21 57 0 0 chr15 24758628 24758663 -78736311 + AT_rich Low_complexity Low_complexity 1 35 0 3 773 737 241 161 41 chr15 24758873 24758971 -78736003 - Lx7 LINE L1 0 7696 7572 3 773 408 40 0 0 chr15 24758971 24759021 -78735953 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 773 737 241 161 41 chr15 24759021 24759312 -78735662 - Lx7 LINE L1 -125 7571 7260 3 773 1630 152 11 107 chr15 24759427 24759877 -78735097 + RMER17C LTR ERVK 1 407 -3 3 773 1346 212 150 53 chr15 24759882 24760370 -78734604 + RMER17C-int LTR ERVK 2 536 -2702 3 773 673 336 119 4 chr15 24760646 24760995 -78733979 - Lx8 LINE L1 -807 6666 6267 3 773 613 221 34 7 chr15 24760997 24761143 -78733831 + L1_Mur3 LINE L1 5032 5181 -699 3 773 423 0 0 0 chr15 24761179 24761226 -78733748 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 773 541 144 0 25 chr15 24761227 24761384 -78733590 + (CAGAGA)n Simple_repeat Simple_repeat 2 154 0 3 773 677 258 116 32 chr15 24761415 24761692 -78733282 + L1_Mur3 LINE L1 5259 5558 -322 3 773 318 214 0 0 chr15 24762126 24762215 -78732759 + (TCCA)n Simple_repeat Simple_repeat 4 92 0 3 773 677 97 0 10 chr15 24762679 24762783 -78732191 + (TG)n Simple_repeat Simple_repeat 2 104 0 3 773 424 336 36 0 chr15 24762824 24762964 -78732010 - B4 SINE B4 -132 160 16 3 773 264 196 52 33 chr15 24763194 24763401 -78731573 + (TCTA)n Simple_repeat Simple_repeat 1 211 0 3 773 11967 29 0 0 chr15 24764573 24766019 -78728955 - Lx2A LINE L1 -1198 5810 4366 3 773 7009 6 28 0 chr15 24766020 24766811 -78728163 + L1Md_T LINE L1 5770 6582 0 3 773 1437 115 0 29 chr15 24766986 24767227 -78727747 - Lx2 LINE L1 -1 6996 6763 3 773 339 85 0 0 chr15 24767991 24768038 -78726936 + (T)n Simple_repeat Simple_repeat 1 47 0 3 773 570 300 84 29 chr15 24768358 24768730 -78726244 - MTD LTR MaLR 0 419 1 3 773 728 256 126 16 chr15 24769652 24769906 -78725068 - B4A SINE B4 -10 282 1 3 773 36 23 0 0 chr15 24770648 24770691 -78724283 + AT_rich Low_complexity Low_complexity 1 43 0 3 96 5771 236 27 37 chr15 24771491 24773544 -78721430 - Lx5 LINE L1 -1 7049 5043 3 774 1487 174 16 10 chr15 24773548 24773856 -78721118 - Lx5 LINE L1 -1874 4003 3694 3 774 1930 92 15 0 chr15 24773856 24774128 -78720846 - MTB_Mm LTR MaLR -131 276 1 3 774 3024 206 45 8 chr15 24774128 24775071 -78719903 - Lx5 LINE L1 -4006 1871 894 3 774 632 130 0 0 chr15 24775298 24775390 -78719584 + L1_Mm LINE L1 5387 5478 -405 3 774 489 184 92 0 chr15 24775533 24775674 -78719300 - Lx9 LINE L1 -2 7642 7489 3 774 1501 232 13 29 chr15 24775852 24776230 -78718744 + ORR1D1 LTR MaLR 1 372 -2 3 774 491 280 157 36 chr15 24776296 24776633 -78718341 + MTEb LTR MaLR 2 379 0 3 774 3609 331 54 28 chr15 24776633 24777863 -78717111 + MTEb-int LTR MaLR 1 1271 -309 3 774 4119 58 0 12 chr15 24777863 24778372 -78716602 + RLTR1C LTR ERV1 1 503 0 3 774 3500 332 54 28 chr15 24778372 24778650 -78716324 + MTEb-int LTR MaLR 1272 1549 -31 3 774 1595 176 57 91 chr15 24781053 24781460 -78713514 - RLTR9C LTR ERVK 0 393 1 3 774 21 36 0 0 chr15 24781542 24781570 -78713404 + AT_rich Low_complexity Low_complexity 1 28 0 3 774 24 0 0 0 chr15 24781808 24781832 -78713142 + AT_rich Low_complexity Low_complexity 1 24 0 3 774 2993 75 2 2 chr15 24782458 24782857 -78712117 + MTB LTR MaLR 2 400 0 3 774 211 200 40 0 chr15 24784112 24784162 -78710812 + (TATAA)n Simple_repeat Simple_repeat 1 52 0 3 774 320 226 58 23 chr15 24785186 24785272 -78709702 + MTE2a LTR MaLR 1 89 -330 3 774 2195 232 31 105 chr15 24785276 24785913 -78709061 + RMER19C LTR ERVK 1 590 -21 3 774 718 277 81 58 chr15 24785918 24786228 -78708746 + MTE2a LTR MaLR 63 379 0 3 774 182 113 26 66 chr15 24787418 24787494 -78707480 + A-rich Low_complexity Low_complexity 3 75 0 3 774 315 122 0 0 chr15 24787510 24787559 -78707415 + (TTTC)n Simple_repeat Simple_repeat 2 50 0 3 774 206 291 150 26 chr15 24788063 24788176 -78706798 + MIR SINE MIR 81 207 -55 3 774 1040 111 0 0 chr15 24788841 24788985 -78705989 - B1_Mus1 SINE Alu -2 146 3 3 774 634 289 0 67 chr15 24789779 24789987 -78704987 + B3 SINE B2 5 198 -18 3 774 564 134 0 0 chr15 24790937 24791034 -78703940 + (TG)n Simple_repeat Simple_repeat 2 98 0 3 774 301 312 45 7 chr15 24791505 24791660 -78703314 - L1MC4 LINE L1 -755 7287 7127 3 774 23 0 0 0 chr15 24791766 24791789 -78703185 + AT_rich Low_complexity Low_complexity 1 23 0 3 774 474 49 0 0 chr15 24791893 24791954 -78703020 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 774 3975 144 21 6 chr15 24792561 24793225 -78701749 - Lx LINE L1 -5 6649 5976 3 774 787 241 20 25 chr15 24793538 24793738 -78701236 - Lx8 LINE L1 -632 6841 6643 3 774 1003 318 47 13 chr15 24793735 24794118 -78700856 + Lx8 LINE L1 6974 7369 -104 3 774 27 29 0 0 chr15 24794659 24794693 -78700281 + AT_rich Low_complexity Low_complexity 1 34 0 3 774 1056 118 86 29 chr15 24795579 24795788 -78699186 - Lx3_Mus LINE L1 0 7009 6789 3 774 200 184 0 0 chr15 24795788 24795826 -78699148 + CT-rich Low_complexity Low_complexity 2 39 0 3 774 1636 66 0 14 chr15 24796008 24796224 -78698750 - Lx3_Mus LINE L1 -258 6751 6539 3 774 223 250 0 0 chr15 24796549 24796597 -78698377 + (TGAA)n Simple_repeat Simple_repeat 1 48 0 3 774 243 246 0 0 chr15 24797212 24797269 -78697705 + GA-rich Low_complexity Low_complexity 2 58 0 3 774 2076 120 23 0 chr15 24797408 24797758 -78697216 + L1_Mur1 LINE L1 4309 4666 -1220 3 774 28 0 0 0 chr15 24797758 24797786 -78697188 + AT_rich Low_complexity Low_complexity 1 28 0 3 774 946 100 0 0 chr15 24797786 24797916 -78697058 - B1_Mm SINE Alu 0 147 18 3 774 8316 38 2 1 chr15 24797934 24799061 -78695913 - L1Md_F2 LINE L1 0 6582 5458 3 774 8110 74 9 2 chr15 24799059 24800139 -78694835 + L1_Mur1 LINE L1 4669 5756 -130 3 774 498 97 0 0 chr15 24800135 24800207 -78694767 - L1_Mus3 LINE L1 -809 5829 5758 3 774 338 341 151 51 chr15 24800207 24800559 -78694415 + MLT1F-int LTR MaLR 1023 1488 -1 3 774 707 200 20 14 chr15 24800979 24801126 -78693848 - B1_Mur1 SINE Alu -1 148 1 3 774 1714 252 72 5 chr15 24801641 24802055 -78692919 - Lx5 LINE L1 -5 7045 6604 3 774 4292 216 82 21 chr15 24802568 24803602 -78691372 + Lx7 LINE L1 6213 7309 -387 3 774 593 159 473 0 chr15 24803604 24803811 -78691163 - ORR1B2 LTR MaLR -46 321 17 3 774 351 44 0 0 chr15 24803811 24803856 -78691118 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 774 230 95 0 45 chr15 24803856 24803900 -78691074 + Lx9 LINE L1 7515 7556 -88 3 774 1054 112 265 43 chr15 24803900 24804134 -78690840 - RMER6C LTR ERVK -399 291 6 3 774 348 312 35 31 chr15 24804259 24804517 -78690457 + L1MA5 LINE L1 6016 6274 -26 3 774 1074 322 50 8 chr15 24804711 24805087 -78689887 - MTD LTR MaLR -15 404 13 3 774 579 29 0 0 chr15 24806438 24806507 -78688467 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 774 25 0 0 0 chr15 24806512 24806537 -78688437 + AT_rich Low_complexity Low_complexity 1 25 0 3 774 210 71 0 0 chr15 24807212 24807240 -78687734 + (TA)n Simple_repeat Simple_repeat 1 28 0 3 774 288 0 0 0 chr15 24807351 24807383 -78687591 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 774 234 0 0 0 chr15 24807383 24807408 -78687566 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 774 21 0 0 0 chr15 24807534 24807555 -78687419 + AT_rich Low_complexity Low_complexity 1 21 0 3 774 24 77 0 0 chr15 24809076 24809128 -78685846 + AT_rich Low_complexity Low_complexity 1 52 0 3 774 265 344 38 19 chr15 24809335 24809492 -78685482 + MIRb SINE MIR 97 256 -12 3 774 1036 359 23 0 chr15 24809832 24810228 -78684746 + Lx8 LINE L1 6884 7288 -185 3 774 358 296 0 0 chr15 24810291 24810399 -78684575 + Lx9 LINE L1 7315 7422 -222 4 774 378 0 0 0 chr15 24810399 24810441 -78684533 + (CATA)n Simple_repeat Simple_repeat 2 43 0 4 774 10381 42 1 2 chr15 24810501 24812449 -78682525 - L1Md_F2 LINE L1 -4 6578 4635 4 774 363 78 0 0 chr15 24812464 24812515 -78682459 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 774 3496 103 15 13 chr15 24812540 24813078 -78681896 + L1_Mus3 LINE L1 6097 6635 -3 4 774 2821 53 12 0 chr15 24813121 24813463 -78681511 + ORR1A1 LTR MaLR 1 346 0 4 774 666 304 71 20 chr15 24814058 24814310 -78680664 - Lx8 LINE L1 -60 7413 7149 4 774 234 274 0 0 chr15 24814318 24814369 -78680605 - Lx9 LINE L1 -923 6721 6671 4 774 1181 254 72 3 chr15 24814389 24814682 -78680292 - Lx5 LINE L1 -3 7047 6735 4 774 1117 306 37 44 chr15 24814679 24815216 -78679758 - Lx8 LINE L1 -939 6534 5997 4 774 282 320 65 48 chr15 24815412 24815642 -78679332 + L1ME1 LINE L1 5789 6022 -157 4 774 339 362 0 18 chr15 24816061 24816224 -78678750 + RSINE1 SINE B4 4 163 -2 4 774 26 50 0 0 chr15 24816329 24816369 -78678605 + AT_rich Low_complexity Low_complexity 1 40 0 4 774 29 0 0 0 chr15 24817030 24817059 -78677915 + AT_rich Low_complexity Low_complexity 1 29 0 4 774 27 49 0 0 chr15 24817093 24817134 -78677840 + AT_rich Low_complexity Low_complexity 1 41 0 4 774 21 82 0 0 chr15 24817590 24817639 -78677335 + AT_rich Low_complexity Low_complexity 1 49 0 4 774 23 54 0 0 chr15 24817727 24817764 -78677210 + AT_rich Low_complexity Low_complexity 1 37 0 4 774 305 268 105 89 chr15 24818309 24818624 -78676350 - L1MC LINE L1 -1313 4833 4514 4 774 862 155 39 6 chr15 24818700 24818856 -78676118 - B2_Mm2 SINE B2 0 195 35 4 774 213 196 0 0 chr15 24819155 24819201 -78675773 + GA-rich Low_complexity Low_complexity 2 47 0 4 774 567 78 0 0 chr15 24819203 24819280 -78675694 + (GGGGA)n Simple_repeat Simple_repeat 5 81 0 4 774 1340 62 6 0 chr15 24819280 24819459 -78675515 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 4 774 699 150 14 7 chr15 24819459 24819600 -78675374 + GA-rich Low_complexity Low_complexity 1 142 0 4 774 609 232 302 3 chr15 24819600 24819899 -78675075 - MTD LTR MaLR -31 388 1 4 774 1798 342 28 18 chr15 24820855 24821380 -78673594 + Lx8 LINE L1 6572 7102 -371 4 774 3183 48 5 2 chr15 24821380 24821775 -78673199 + MTA_Mm LTR MaLR 1 396 0 4 774 1798 342 28 18 chr15 24821775 24822070 -78672904 + Lx8 LINE L1 7103 7400 -73 4 774 269 315 45 0 chr15 24824022 24824111 -78670863 - RSINE1 SINE B4 -69 96 4 4 774 5390 29 0 0 chr15 24824139 24824768 -78670206 + L1Md_T LINE L1 5954 6582 0 4 774 204 97 0 0 chr15 24824793 24824824 -78670150 + (A)n Simple_repeat Simple_repeat 1 31 0 4 774 721 206 14 0 chr15 24825172 24825318 -78669656 - URR1A DNA MER1_type -5 221 74 4 774 1586 173 123 3 chr15 24825320 24825628 -78669346 + RMER1B Other Other 554 898 -168 4 774 206 321 37 12 chr15 24825772 24825854 -78669120 + MIR SINE MIR 40 123 -139 4 774 632 162 0 51 chr15 24826015 24826132 -78668842 - B1_Mur1 SINE Alu -27 122 12 4 774 611 312 102 35 chr15 24826231 24826329 -78668645 - MER70A LTR ERVL -9 463 368 4 774 3220 21 42 0 chr15 24826329 24826709 -78668265 - MTA_Mm LTR MaLR 0 396 1 4 774 9349 24 2 1 chr15 24826711 24827806 -78667168 - MTA_Mm-int LTR MaLR -2 1096 1 4 774 3220 21 42 0 chr15 24827806 24828186 -78666788 - MTA_Mm LTR MaLR 0 396 1 4 774 611 312 102 35 chr15 24828186 24828309 -78666665 - MER70A LTR ERVL -105 367 224 4 774 21 0 0 0 chr15 24828421 24828442 -78666532 + AT_rich Low_complexity Low_complexity 1 21 0 4 774 243 0 0 0 chr15 24828484 24828511 -78666463 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 774 375 302 20 99 chr15 24828516 24828718 -78666256 - B4 SINE B4 0 292 107 4 774 2389 104 3 0 chr15 24828728 24829054 -78665920 + ORR1A2 LTR MaLR 1 327 0 4 774 247 134 14 29 chr15 24829080 24829149 -78665825 + T-rich Low_complexity Low_complexity 2 69 0 4 774 311 250 28 0 chr15 24829149 24829221 -78665753 - B4 SINE B4 -218 74 1 4 774 28 0 0 0 chr15 24830236 24830264 -78664710 + AT_rich Low_complexity Low_complexity 1 28 0 4 774 527 327 22 31 chr15 24830267 24830491 -78664483 + ID_B1 SINE B4 2 223 -1 4 774 429 20 0 0 chr15 24830548 24830598 -78664376 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 774 336 286 45 0 chr15 24830604 24830709 -78664265 - B3A SINE B2 -24 192 82 4 774 1004 33 0 0 chr15 24830717 24830837 -78664137 + L1Md_T LINE L1 5780 5899 -683 4 774 3287 45 2 0 chr15 24830836 24831232 -78663742 - L1_Mm LINE L1 -86 5797 5401 4 774 721 85 75 25 chr15 24831264 24831384 -78663590 + B1_Mm SINE Alu 1 126 -21 4 774 3047 156 18 4 chr15 24831468 24831982 -78662992 - Lx2 LINE L1 -11 6986 6466 4 774 527 0 16 0 chr15 24831995 24832058 -78662916 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 4 774 1066 73 0 7 chr15 24832058 24832196 -78662778 - B1_Mus1 SINE Alu -10 138 2 4 774 446 326 93 88 chr15 24832196 24832844 -78662130 - L1M4 LINE L1 -810 5336 4686 4 774 640 259 50 20 chr15 24833897 24834088 -78660886 - Lx6 LINE L1 -26 7434 7258 4 774 23 0 0 0 chr15 24834380 24834403 -78660571 + AT_rich Low_complexity Low_complexity 1 23 0 4 774 4043 55 8 0 chr15 24834795 24835301 -78659673 - L1Md_F2 LINE L1 -3 6579 6070 4 774 308 260 0 0 chr15 24835350 24835423 -78659551 + (ATG)n Simple_repeat Simple_repeat 3 75 0 4 774 369 0 0 0 chr15 24835513 24835554 -78659420 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 774 204 171 24 0 chr15 24836171 24836212 -78658762 + A-rich Low_complexity Low_complexity 3 44 0 4 774 234 62 0 0 chr15 24836212 24836244 -78658730 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4 774 2877 150 29 8 chr15 24837885 24838401 -78656573 - Lx3A LINE L1 0 6981 6455 4 774 300 333 33 20 chr15 24838670 24838820 -78656154 - MLT2D LTR ERVL -226 188 37 4 774 438 330 35 60 chr15 24839405 24839605 -78655369 - ORR1E LTR MaLR -2 357 163 4 774 553 90 11 11 chr15 24839613 24839703 -78655271 + (GAAA)n Simple_repeat Simple_repeat 1 90 0 4 774 552 333 11 11 chr15 24839703 24839724 -78655250 - ORR1E LTR MaLR -168 191 171 4 774 896 27 0 9 chr15 24839724 24839836 -78655138 + (GAGAA)n Simple_repeat Simple_repeat 5 115 0 4 774 552 333 11 11 chr15 24839836 24840005 -78654969 - ORR1E LTR MaLR -189 170 2 4 774 257 240 38 51 chr15 24842837 24842916 -78652058 + MLT1A0 LTR MaLR 15 92 -282 4 774 4211 116 27 28 chr15 24842916 24843591 -78651383 - L1_Mm LINE L1 -168 5715 5042 4 774 308 324 0 29 chr15 24843591 24843696 -78651278 + MLT1A0 LTR MaLR 93 194 -171 4 774 1033 82 0 0 chr15 24843702 24843837 -78651137 + B1_Mus1 SINE Alu 1 135 -13 4 774 281 26 0 26 chr15 24843837 24843876 -78651098 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 4 774 254 401 33 104 chr15 24847489 24847759 -78647215 + LTR40a LTR ERVL 150 400 -119 4 774 735 250 35 26 chr15 24848047 24848277 -78646697 - Lx8 LINE L1 -408 7065 6834 4 774 30 27 0 0 chr15 24848762 24848799 -78646175 + AT_rich Low_complexity Low_complexity 1 37 0 4 774 239 359 70 6 chr15 24849153 24849310 -78645664 + MLT1D LTR MaLR 1 167 -338 4 774 475 313 18 18 chr15 24849488 24849654 -78645320 - RMER30 DNA MER1_type -35 167 2 4 774 310 271 110 39 chr15 24849654 24849762 -78645212 + MLT1D LTR MaLR 336 452 -53 4 774 21 36 0 0 chr15 24850159 24850187 -78644787 + AT_rich Low_complexity Low_complexity 1 28 0 4 774 327 49 0 0 chr15 24851530 24851571 -78643403 + (TAA)n Simple_repeat Simple_repeat 3 43 0 4 774 195 303 43 33 chr15 24852263 24852355 -78642619 + L4 LINE RTE 451 543 -1486 4 774 824 246 56 24 chr15 24852400 24852650 -78642324 - RCHARR1 DNA MER1_type 0 974 717 4 774 4026 72 15 2 chr15 24852739 24853282 -78641692 - L1_Mus3 LINE L1 0 6638 6089 4 774 1585 71 0 0 chr15 24853282 24853494 -78641480 + L1_Mus3 LINE L1 5852 6063 -575 4 774 396 0 0 0 chr15 24854056 24854100 -78640874 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 774 255 319 14 0 chr15 24854429 24854498 -78640476 - ID2 SINE ID -9 74 5 4 774 624 291 46 35 chr15 24854530 24854815 -78640159 - Lx8 LINE L1 0 7473 7186 4 774 2989 28 0 0 chr15 24854976 24855329 -78639645 + L1Md_T LINE L1 6230 6582 0 4 774 207 100 0 0 chr15 24855332 24855362 -78639612 + (A)n Simple_repeat Simple_repeat 1 30 0 4 774 606 305 46 36 chr15 24857463 24857625 -78637349 + B3A SINE B2 2 170 -28 4 774 207 100 0 0 chr15 24857625 24857655 -78637319 + (CATA)n Simple_repeat Simple_repeat 1 30 0 4 774 606 305 46 36 chr15 24857655 24857686 -78637288 + B3A SINE B2 171 197 -1 4 774 450 0 0 0 chr15 24857946 24857996 -78636978 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 774 1906 98 77 0 chr15 24858024 24858298 -78636676 - Lx LINE L1 -336 6318 6024 4 774 999 127 0 6 chr15 24858298 24858465 -78636509 + Lx LINE L1 6488 6653 -1 4 774 219 85 42 21 chr15 24858555 24858603 -78636371 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 774 423 208 53 12 chr15 24859201 24859371 -78635603 + (TA)n Simple_repeat Simple_repeat 1 177 0 4 774 253 86 70 14 chr15 24859390 24859461 -78635513 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 4 774 333 325 142 11 chr15 24860065 24860255 -78634719 + B3 SINE B2 2 216 0 4 774 243 348 33 17 chr15 24860597 24860717 -78634257 + Helitron2Na_Mam RC Helitron? 13 134 -190 4 774 1184 108 21 31 chr15 24861562 24861753 -78633221 + B2_Mm2 SINE B2 2 190 -5 4 774 478 358 66 16 chr15 24862043 24862347 -78632627 - MER63C DNA AcHobo -350 580 262 4 774 731 93 12 20 chr15 24862485 24862614 -78632360 + MTB_Mm LTR MaLR 1 129 -292 4 774 307 277 154 14 chr15 24862792 24862935 -78632039 + MER2 DNA MER2_type 72 234 -111 4 774 183 129 0 0 chr15 24862942 24862973 -78632001 + (CATA)n Simple_repeat Simple_repeat 4 34 0 4 774 470 234 14 34 chr15 24863958 24864104 -78630870 - Lx6 LINE L1 0 7460 7318 4 774 24 77 0 0 chr15 24864605 24864657 -78630317 + AT_rich Low_complexity Low_complexity 1 52 0 4 774 21 0 0 0 chr15 24865217 24865238 -78629736 + AT_rich Low_complexity Low_complexity 1 21 0 4 774 377 299 28 18 chr15 24865375 24865484 -78629490 - B1F2 SINE Alu -14 135 26 4 774 7204 76 13 20 chr15 24865699 24866782 -78628192 - L1_Mus2 LINE L1 -5 6561 5488 5 774 13862 107 32 2 chr15 24866803 24869602 -78625372 + L1_Mus3 LINE L1 3752 6633 -5 5 774 770 91 9 0 chr15 24869671 24869781 -78625193 + MT2B2 LTR ERVL 474 584 0 5 774 15419 146 41 38 chr15 24869781 24872075 -78622899 + MERVL-int LTR ERVL 1 2322 -3163 5 774 4878 32 2 7 chr15 24872075 24872664 -78622310 + L1Md_F2 LINE L1 5997 6582 0 5 774 15419 117 96 14 chr15 24872664 24874160 -78620814 + MERVL-int LTR ERVL 2323 3919 -1566 5 774 448 38 0 0 chr15 24874158 24874211 -78620763 + MERVL-int LTR ERVL 4447 4499 -986 5 774 3066 61 5 8 chr15 24874212 24874609 -78620365 - MTA_Mm LTR MaLR 0 396 1 5 774 712 120 0 0 chr15 24874610 24874718 -78620256 + Lx4B LINE L1 5757 5864 -1194 5 774 4467 181 10 36 chr15 24874718 24875329 -78619645 - RMER13B LTR ERVK -58 850 246 5 774 3404 25 5 0 chr15 24875329 24875723 -78619251 + MTA_Mm LTR MaLR 1 396 0 5 774 4467 181 10 36 chr15 24875723 24875983 -78618991 - RMER13B LTR ERVK -663 245 1 5 774 650 108 0 0 chr15 24875983 24876076 -78618898 + Lx4B LINE L1 5923 6015 -1043 5 774 906 89 0 0 chr15 24876483 24876606 -78618368 + B2_Mm2 SINE B2 4 126 -69 5 774 2149 177 53 38 chr15 24877538 24877990 -78616984 - RMER6B LTR ERVK -2 459 1 5 774 240 35 0 0 chr15 24878893 24878922 -78616052 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 5 774 1375 45 34 0 chr15 24879007 24879184 -78615790 - L1Md_A LINE L1 -2 6580 6398 5 774 663 108 2 0 chr15 24879185 24879289 -78615685 + L1Md_F2 LINE L1 5959 6071 -511 5 774 521 117 88 12 chr15 24880316 24880421 -78614553 - Lx4B LINE L1 -1436 6024 5921 5 774 1810 169 3 59 chr15 24880421 24880761 -78614213 + RMER13B LTR ERVK 1 321 -587 5 774 3758 155 7 13 chr15 24881069 24881684 -78613290 - Lx2 LINE L1 -100 6897 6287 5 774 1038 177 11 0 chr15 24881684 24881865 -78613109 + Lx2 LINE L1 6107 6289 -708 5 774 321 26 0 0 chr15 24882975 24883013 -78611961 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 774 370 325 9 0 chr15 24883589 24883703 -78611271 + MER94 DNA AcHobo 16 130 -4 5 774 348 282 162 23 chr15 24884026 24884291 -78610683 - L1ME2 LINE L1 -257 5905 5604 5 774 2100 126 0 19 chr15 24884313 24884539 -78610435 - Lx3C LINE L1 -421 6555 6335 5 774 2982 83 2 10 chr15 24884539 24884942 -78610032 - MTB LTR MaLR 0 400 1 5 774 2100 126 0 19 chr15 24884942 24885031 -78609943 - Lx3C LINE L1 -642 6334 6246 5 774 1891 127 40 10 chr15 24885031 24885333 -78609641 + Lx3C LINE L1 6664 6974 -2 5 774 3271 39 44 2 chr15 24887641 24888053 -78606921 - L1_Mus2 LINE L1 0 6566 6138 5 774 425 263 35 9 chr15 24888111 24888226 -78606748 - ORR1D2 LTR MaLR -153 217 100 5 774 634 75 0 0 chr15 24888903 24889036 -78605938 - L1_Mus1 LINE L1 0 6567 6458 5 774 180 158 35 17 chr15 24889533 24889591 -78605383 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 774 438 20 0 0 chr15 24889756 24889807 -78605167 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 774 1327 214 43 38 chr15 24891492 24891865 -78603109 + Lx9 LINE L1 7255 7629 -15 5 774 272 318 58 65 chr15 24892003 24892141 -78602833 + Lx8 LINE L1 7240 7376 -97 5 774 420 71 0 0 chr15 24893027 24893083 -78601891 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 774 227 269 19 0 chr15 24893149 24893201 -78601773 - L1M3b LINE L1 -6220 61 9 5 774 234 228 0 50 chr15 24894678 24894738 -78600236 + Tigger10 DNA Tigger 1372 1428 -415 5 774 523 331 156 19 chr15 24895424 24895732 -78599242 + MLT1A0 LTR MaLR 15 364 -1 5 774 567 289 8 0 chr15 24895874 24896002 -78598972 + B3A SINE B2 1 129 -69 5 774 450 0 0 0 chr15 24896003 24896053 -78598921 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 774 373 207 118 2 chr15 24896635 24896771 -78598203 - Lx7 LINE L1 -1782 5914 5730 5 774 497 271 32 22 chr15 24896950 24897135 -78597839 - L1M2 LINE L1 -922 5221 5035 5 774 1122 22 7 0 chr15 24897458 24897593 -78597381 + B1_Mus2 SINE Alu 1 136 -11 5 774 279 0 0 0 chr15 24897595 24897626 -78597348 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 774 639 191 5 48 chr15 24897787 24897974 -78597000 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 774 480 208 133 0 chr15 24898177 24898272 -78596702 + B1F1 SINE Alu 6 106 -43 5 774 1072 268 54 11 chr15 24898272 24898623 -78596351 - ORR1D2 LTR MaLR 0 370 5 5 774 480 208 133 0 chr15 24898623 24898647 -78596327 + B1F1 SINE Alu 107 140 -9 5 774 3108 151 24 0 chr15 24900531 24901028 -78593946 + Lx3C LINE L1 6459 6967 -9 5 774 313 300 16 8 chr15 24901064 24901161 -78593813 + (TA)n Simple_repeat Simple_repeat 2 99 0 5 774 333 0 0 0 chr15 24901161 24901198 -78593776 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 774 313 300 16 8 chr15 24901198 24901221 -78593753 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 775 1086 125 5 61 chr15 24903726 24903922 -78591052 + B2_Mm1t SINE B2 2 186 -7 5 775 1027 250 121 43 chr15 24904299 24904646 -78590328 - MTEb LTR MaLR -5 374 1 5 775 793 209 98 16 chr15 24905218 24905412 -78589562 - ORR1C1 LTR MaLR -3 375 166 5 775 562 201 0 44 chr15 24905414 24905596 -78589378 + G-rich Low_complexity Low_complexity 6 179 0 5 775 513 247 141 13 chr15 24905596 24905752 -78589222 - ORR1C1 LTR MaLR -188 186 11 5 775 31 21 0 20 chr15 24906573 24906593 -78588381 + AT_rich Low_complexity Low_complexity 1 20 0 5 775 386 187 26 9 chr15 24906593 24906706 -78588268 + Lx9 LINE L1 7528 7642 -2 5 775 31 21 0 20 chr15 24906706 24906734 -78588240 + AT_rich Low_complexity Low_complexity 1 28 0 5 775 551 270 79 0 chr15 24907229 24907355 -78587619 + RSINE1 SINE B4 2 139 -26 5 775 594 0 0 0 chr15 24907355 24907421 -78587553 + (TC)n Simple_repeat Simple_repeat 1 66 0 5 775 551 270 79 0 chr15 24907421 24907446 -78587528 + RSINE1 SINE B4 140 164 -1 5 775 252 211 0 0 chr15 24907446 24907522 -78587452 + (CA)n Simple_repeat Simple_repeat 1 76 0 5 775 188 283 50 0 chr15 24907909 24907969 -78587005 + L3 LINE CR1 4141 4203 -286 5 775 1174 69 0 0 chr15 24908026 24908171 -78586803 + B1_Mus2 SINE Alu 1 145 -2 5 775 513 84 0 0 chr15 24908175 24908246 -78586728 + (TGGA)n Simple_repeat Simple_repeat 3 73 0 5 775 458 333 152 42 chr15 24908960 24909633 -78585341 + L1MEc LINE L1 674 1420 -4980 5 775 28 48 0 0 chr15 24910248 24910290 -78584684 + AT_rich Low_complexity Low_complexity 1 42 0 5 775 382 289 71 13 chr15 24910804 24910958 -78584016 - MLT1E2 LTR MaLR -390 237 75 5 775 433 67 0 0 chr15 24911104 24911164 -78583810 - B1_Mm SINE Alu -2 145 86 5 775 1092 290 74 15 chr15 24911378 24911770 -78583204 - Lx8 LINE L1 -136 7337 6923 5 775 942 238 9 5 chr15 24911766 24911981 -78582993 + Lx9 LINE L1 5632 5847 0 5 775 323 272 78 17 chr15 24911984 24912100 -78582874 + Lx9 LINE L1 5785 5907 -1737 5 775 922 298 70 20 chr15 24912511 24912854 -78582120 - Lx9 LINE L1 -903 6741 6382 5 775 302 286 46 28 chr15 24913155 24913263 -78581711 + L1M5 LINE L1 4941 5050 -1096 5 775 485 353 9 43 chr15 24913329 24913539 -78581435 + B4A SINE B4 81 283 -9 5 775 217 338 25 12 chr15 24913741 24913822 -78581152 + PB1D10 SINE Alu 11 92 -25 5 775 268 284 16 41 chr15 24914009 24914130 -78580844 + L1M5 LINE L1 5417 5534 -645 5 775 560 326 49 5 chr15 24914356 24914521 -78580453 + B3A SINE B2 6 178 -20 5 775 369 0 0 0 chr15 24914521 24914562 -78580412 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 775 560 326 49 5 chr15 24914562 24914581 -78580393 + B3A SINE B2 179 198 0 5 775 264 207 114 11 chr15 24914753 24914841 -78580133 + L1ME2 LINE L1 6027 6123 -41 5 775 22 0 0 0 chr15 24915002 24915024 -78579950 + AT_rich Low_complexity Low_complexity 1 22 0 5 775 6628 174 88 16 chr15 24915219 24917562 -78577412 - Lx5 LINE L1 -3 7047 4541 5 775 3097 161 4 13 chr15 24917561 24918104 -78576870 + Lx5 LINE L1 4004 4541 -1336 5 775 724 174 16 0 chr15 24918112 24918233 -78576741 - Lx7 LINE L1 -388 7308 7186 5 775 32 0 0 0 chr15 24918270 24918302 -78576672 + AT_rich Low_complexity Low_complexity 1 32 0 5 775 357 333 45 74 chr15 24918547 24918790 -78576184 + B4A SINE B4 57 292 0 5 775 357 323 134 42 chr15 24918902 24919215 -78575759 + Charlie1a DNA MER1_type 565 906 -549 5 775 200 405 9 0 chr15 24919883 24919999 -78574975 + L3 LINE CR1 3829 3945 -544 5 775 285 325 88 82 chr15 24920178 24920349 -78574625 - LTR16B1 LTR ERVL 0 480 309 5 775 287 291 11 75 chr15 24920393 24920486 -78574488 + ORR1E LTR MaLR 1 87 -272 5 775 2178 259 124 27 chr15 24921043 24921821 -78573153 - RMER13A LTR ERVK -76 784 1 5 775 243 0 0 0 chr15 24922177 24922204 -78572770 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 5 775 21 0 0 0 chr15 24922434 24922455 -78572519 + AT_rich Low_complexity Low_complexity 1 21 0 5 775 836 271 154 3 chr15 24924882 24925201 -78569773 + MTEb LTR MaLR 1 367 -12 5 775 3144 289 86 132 chr15 24925208 24925294 -78569680 + MTEb-int LTR MaLR 16 99 -1481 5 775 383 38 19 0 chr15 24925294 24925347 -78569627 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 5 775 3144 289 86 132 chr15 24925347 24926600 -78568374 + MTEb-int LTR MaLR 100 1266 -314 5 775 208 53 53 0 chr15 24926600 24926638 -78568336 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 775 3144 289 86 132 chr15 24926638 24926930 -78568044 + MTEb-int LTR MaLR 1267 1571 -9 5 775 778 255 75 0 chr15 24926938 24927138 -78567836 + MTEb LTR MaLR 1 215 -164 5 775 232 239 109 43 chr15 24927163 24927255 -78567719 + MTEb LTR MaLR 282 379 0 5 775 254 234 142 25 chr15 24927255 24927417 -78567557 - L1_Rod LINE L1 -481 5366 5186 5 775 22 0 0 0 chr15 24927462 24927484 -78567490 + AT_rich Low_complexity Low_complexity 1 22 0 5 775 1894 106 43 31 chr15 24927941 24928041 -78566933 + ORR1A2 LTR MaLR 1 100 -227 5 775 3118 41 10 8 chr15 24928041 24928437 -78566537 - L1Md_F3 LINE L1 0 6584 6188 5 775 1894 106 43 31 chr15 24928437 24928659 -78566315 + ORR1A2 LTR MaLR 101 325 -2 5 775 21 0 0 0 chr15 24929358 24929379 -78565595 + AT_rich Low_complexity Low_complexity 1 21 0 5 775 745 271 19 10 chr15 24929388 24929593 -78565381 - B3 SINE B2 -9 207 1 5 775 981 298 41 32 chr15 24929922 24930265 -78564709 - ORR1E LTR MaLR -9 350 5 5 775 389 353 105 29 chr15 24931808 24932085 -78562889 - MLT1J2 LTR MaLR -78 370 73 5 775 685 339 52 73 chr15 24932089 24932458 -78562516 - MLT1E1A LTR MaLR -9 671 311 5 775 1011 318 19 19 chr15 24933543 24933909 -78561065 + Lx8 LINE L1 6960 7325 -148 5 775 21 0 0 0 chr15 24934071 24934092 -78560882 + AT_rich Low_complexity Low_complexity 1 21 0 5 775 285 146 0 0 chr15 24934702 24934750 -78560224 + (TTG)n Simple_repeat Simple_repeat 1 48 0 5 775 5229 97 16 11 chr15 24934750 24935511 -78559463 - L1_Mus3 LINE L1 -10 6628 5864 5 775 576 169 7 145 chr15 24936722 24936874 -78558100 + URR1B DNA MER1_type 94 224 -1 6 775 252 0 0 0 chr15 24937105 24937133 -78557841 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 775 1803 227 7 32 chr15 24937988 24938393 -78556581 - Lx7 LINE L1 -698 6998 6604 6 775 1097 281 21 9 chr15 24938415 24938753 -78556221 + Lx7 LINE L1 7019 7360 -336 6 775 180 125 0 0 chr15 24938765 24938797 -78556177 + (TTGG)n Simple_repeat Simple_repeat 4 35 0 6 775 198 0 0 0 chr15 24938812 24938834 -78556140 + (TTG)n Simple_repeat Simple_repeat 2 23 0 6 775 517 88 0 0 chr15 24939138 24939206 -78555768 + Lx3_Mus LINE L1 6589 6656 -353 6 775 1344 93 48 10 chr15 24939206 24939413 -78555561 + Lx3_Mus LINE L1 6795 7009 0 6 775 242 167 156 109 chr15 24939586 24939714 -78555260 + L1M2 LINE L1 5099 5232 -911 6 775 3664 60 20 6 chr15 24939917 24940406 -78554568 - LTRIS2 LTR ERV1 0 564 69 6 775 2779 105 8 5 chr15 24941293 24941695 -78553279 - RLTR9D LTR ERVK 0 403 1 6 775 391 125 27 14 chr15 24941696 24941769 -78553205 - MMETn-int LTR ERVK -2 7404 7331 6 775 2881 188 20 43 chr15 24941980 24942920 -78552054 - MMETn-int LTR ERVK -1703 3141 2539 6 775 4119 78 0 0 chr15 24942920 24943456 -78551518 + L1Md_F2 LINE L1 5050 5585 -298 6 775 7550 56 17 13 chr15 24943458 24944437 -78550537 + L1Md_F2 LINE L1 5588 6570 -12 6 775 609 110 0 0 chr15 24944462 24944553 -78550421 + (GGA)n Simple_repeat Simple_repeat 3 93 0 6 775 1305 83 0 0 chr15 24944553 24944733 -78550241 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 6 775 8262 182 72 27 chr15 24944734 24947385 -78547589 - ETnERV2-int LTR ERVK -2082 5162 812 6 775 994 117 81 5 chr15 24947387 24947585 -78547389 - ETnERV2-int LTR ERVK -6119 1287 1075 6 775 941 257 35 66 chr15 24947604 24948000 -78546974 - ETnERV2-int LTR ERVK -2928 386 3 6 775 2803 112 5 2 chr15 24948002 24948404 -78546570 - RLTR9D LTR ERVK 0 403 1 6 775 478 207 0 27 chr15 24951183 24951367 -78543607 + (CA)n Simple_repeat Simple_repeat 2 180 0 6 775 1947 154 28 12 chr15 24952567 24952637 -78542337 - ORR1A2 LTR MaLR 0 327 252 6 775 1980 118 56 34 chr15 24952637 24952995 -78541979 - Lx2 LINE L1 -1 6996 6631 6 775 1947 154 28 12 chr15 24952995 24953246 -78541728 - ORR1A2 LTR MaLR -76 251 1 6 775 282 73 0 0 chr15 24953697 24953738 -78541236 + (TA)n Simple_repeat Simple_repeat 1 41 0 6 775 396 0 0 0 chr15 24953752 24953796 -78541178 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 6 775 221 162 73 20 chr15 24953841 24953992 -78540982 + (TAGA)n Simple_repeat Simple_repeat 2 160 0 6 775 297 68 0 0 chr15 24953992 24954036 -78540938 + (ATTG)n Simple_repeat Simple_repeat 3 46 0 6 775 425 189 72 18 chr15 24954097 24954264 -78540710 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 6 775 4562 102 11 18 chr15 24954336 24954995 -78539979 + Lx LINE L1 5993 6646 -8 6 775 252 0 0 0 chr15 24955001 24955029 -78539945 + (GAAA)n Simple_repeat Simple_repeat 3 30 0 6 775 300 259 174 26 chr15 24955029 24955144 -78539830 + HAL1-3A_ME LINE L1 2284 2415 -443 6 775 204 200 0 0 chr15 24957442 24957492 -78537482 + GA-rich Low_complexity Low_complexity 2 51 0 6 775 348 211 0 0 chr15 24957576 24957652 -78537322 + (CATA)n Simple_repeat Simple_repeat 4 79 0 6 775 21 0 0 0 chr15 24958163 24958184 -78536790 + AT_rich Low_complexity Low_complexity 1 21 0 6 775 393 22 0 0 chr15 24958243 24958289 -78536685 + (TAGA)n Simple_repeat Simple_repeat 2 47 0 6 775 21 0 0 0 chr15 24959570 24959591 -78535383 + AT_rich Low_complexity Low_complexity 1 21 0 6 775 48 43 0 0 chr15 24960566 24960635 -78534339 + AT_rich Low_complexity Low_complexity 1 69 0 6 775 941 148 64 35 chr15 24961498 24961701 -78533273 + RMER6A LTR ERVK 345 553 -203 6 775 1162 69 0 0 chr15 24961912 24962056 -78532918 - B1_Mus1 SINE Alu -3 145 2 6 775 2361 253 104 17 chr15 24962749 24963460 -78531514 + RMER1C Other Other 567 1339 -3 6 775 435 330 112 41 chr15 24963467 24963833 -78531141 - L1MD3 LINE L1 -1968 6027 5636 6 775 455 322 98 4 chr15 24964230 24964495 -78530479 + Lx8 LINE L1 7178 7467 -6 6 775 249 296 92 49 chr15 24964562 24964650 -78530324 - Lx9 LINE L1 -28 7616 7532 6 775 459 0 0 0 chr15 24964650 24964701 -78530273 + (TTA)n Simple_repeat Simple_repeat 1 51 0 6 775 1964 183 84 110 chr15 24964705 24965252 -78529722 - RMER16 LTR ERVK 0 533 1 6 775 249 296 92 49 chr15 24965252 24965442 -78529532 - Lx9 LINE L1 -113 7531 7331 6 775 204 125 0 0 chr15 24965464 24965496 -78529478 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 775 273 57 0 0 chr15 24965609 24965644 -78529330 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 775 193 197 15 15 chr15 24965657 24965724 -78529250 + GA-rich Low_complexity Low_complexity 2 68 0 6 775 1010 143 6 0 chr15 24965726 24965901 -78529073 + (GGAA)n Simple_repeat Simple_repeat 2 177 0 6 775 3661 56 29 4 chr15 24966517 24967001 -78527973 + LTRIS2 LTR ERV1 69 564 0 6 775 817 317 119 29 chr15 24967258 24967602 -78527372 - MTE2b LTR MaLR -2 377 3 6 775 31786 92 18 5 chr15 24968565 24974864 -78520110 - L1Md_F2 LINE L1 -11 6571 182 6 775 183 42 0 0 chr15 24975161 24975185 -78519789 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6 775 244 382 60 15 chr15 24975927 24976060 -78518914 + LTR78 LTR ERV1 1063 1201 -103 6 775 1082 55 0 52 chr15 24976068 24976222 -78518752 + B1_Mus1 SINE Alu 3 148 0 6 775 315 71 0 0 chr15 24976222 24976264 -78518710 + (A)n Simple_repeat Simple_repeat 1 42 0 6 775 419 290 134 52 chr15 24976861 24977286 -78517688 - Charlie1a DNA MER1_type -45 1410 951 6 775 536 242 43 25 chr15 24977418 24977579 -78517395 - Charlie1a DNA MER1_type -813 642 479 6 775 312 242 0 0 chr15 24977586 24977652 -78517322 - HAL1-3A_ME LINE L1 -838 2020 1955 6 775 638 250 31 43 chr15 24977668 24977831 -78517143 - B3A SINE B2 -33 165 5 6 775 1184 55 0 14 chr15 24978416 24978564 -78516410 - B1_Mm SINE Alu 0 147 2 6 775 486 283 51 28 chr15 24978710 24978888 -78516086 + B3A SINE B2 1 182 -16 6 775 469 42 42 0 chr15 24978899 24978970 -78516004 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 6 775 396 0 0 0 chr15 24979239 24979283 -78515691 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 775 513 234 13 33 chr15 24980443 24980593 -78514381 - Lx7 LINE L1 0 7696 7550 6 775 623 109 20 0 chr15 24980595 24980696 -78514278 + (GAAA)n Simple_repeat Simple_repeat 3 105 0 6 775 280 73 55 0 chr15 24980704 24980759 -78514215 + (CAGAGA)n Simple_repeat Simple_repeat 3 60 0 6 775 756 210 22 112 chr15 24980762 24981084 -78513890 - Lx7 LINE L1 -158 7538 7246 6 775 426 185 63 76 chr15 24981083 24981241 -78513733 + L1_Mur3 LINE L1 3200 3355 -2525 6 775 2705 31 47 0 chr15 24981242 24981564 -78513410 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 775 19580 40 47 14 chr15 24981564 24984141 -78510833 + IAPEz-int LTR ERVK 8 2670 -3811 6 775 8994 20 2 6 chr15 24984122 24985205 -78509769 + IAPEz-int LTR ERVK 5403 6481 0 6 775 2692 34 47 0 chr15 24985205 24985527 -78509447 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 775 2134 188 103 65 chr15 24985528 24986017 -78508957 + L1_Mur3 LINE L1 3352 3900 -1980 6 775 2096 62 4 4 chr15 24986017 24986292 -78508682 + L1_Mus1 LINE L1 6293 6567 0 6 775 2134 188 103 65 chr15 24986292 24986422 -78508552 + L1_Mur3 LINE L1 3901 3995 -1885 6 775 1253 261 31 0 chr15 24986427 24986753 -78508221 + Lx6 LINE L1 6401 6736 -724 6 775 504 0 0 0 chr15 24986792 24986848 -78508126 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 775 1861 270 28 32 chr15 24986863 24987398 -78507576 + Lx6 LINE L1 6914 7446 -14 6 775 261 185 0 18 chr15 24987404 24987459 -78507515 - Lx7 LINE L1 -433 7263 7210 6 775 1939 257 41 51 chr15 24987473 24987639 -78507335 - Lx7 LINE L1 -1357 6339 6180 6 775 254 50 0 24 chr15 24987639 24987680 -78507294 + (TAGA)n Simple_repeat Simple_repeat 3 42 0 6 775 1939 257 41 51 chr15 24987680 24988201 -78506773 - Lx7 LINE L1 -1517 6179 5659 6 775 490 324 41 122 chr15 24988295 24988615 -78506359 - ORR1E LTR MaLR -65 294 1 6 775 21 0 0 0 chr15 24989047 24989068 -78505906 + AT_rich Low_complexity Low_complexity 1 21 0 6 775 1577 137 49 0 chr15 24989588 24989851 -78505123 + Lx2A LINE L1 6726 7001 -7 6 775 195 42 0 0 chr15 24989872 24989896 -78505078 + (GAAA)n Simple_repeat Simple_repeat 2 25 0 6 775 198 0 0 0 chr15 24990973 24990995 -78503979 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 6 775 14494 10 0 0 chr15 24992150 24993873 -78501101 + L1Md_A LINE L1 3863 5585 -298 6 775 8973 8 0 0 chr15 24993874 24994870 -78500104 + L1Md_A LINE L1 5587 6582 0 6 775 244 152 43 0 chr15 24994877 24994923 -78500051 + Lx7 LINE L1 6139 6186 -1510 6 775 30 77 0 0 chr15 24994929 24994994 -78499980 + AT_rich Low_complexity Low_complexity 1 65 0 6 775 238 26 51 0 chr15 24994994 24995033 -78499941 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 775 201 237 0 0 chr15 24995056 24995094 -78499880 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 775 609 274 35 19 chr15 24995166 24995370 -78499604 + Lx8 LINE L1 6344 6645 -999 6 775 929 320 52 30 chr15 24995367 24995905 -78499069 + Lx8 LINE L1 6575 7098 -362 6 775 771 69 0 0 chr15 24995944 24996046 -78498928 + (TG)n Simple_repeat Simple_repeat 2 103 0 6 775 806 256 4 4 chr15 24996084 24996130 -78498844 + Lx7 LINE L1 5781 5827 -1869 6 775 330 91 0 0 chr15 24996130 24996185 -78498789 + (CATA)n Simple_repeat Simple_repeat 2 56 0 6 775 806 256 4 4 chr15 24996185 24996369 -78498605 + Lx7 LINE L1 5828 6010 -1686 6 775 591 169 21 21 chr15 24996372 24996517 -78498457 + Lx9 LINE L1 7495 7639 -5 6 775 329 194 35 44 chr15 24996544 24996657 -78498317 + Lx8 LINE L1 7361 7472 -1 6 775 34 42 0 0 chr15 24996735 24996783 -78498191 + AT_rich Low_complexity Low_complexity 1 48 0 6 775 703 230 100 20 chr15 24996950 24997150 -78497824 + B3 SINE B2 1 216 0 6 775 337 313 66 50 chr15 24997259 24997380 -78497594 + RSINE1 SINE B4 12 134 -31 6 775 336 48 0 0 chr15 24997385 24997427 -78497547 + (CATA)n Simple_repeat Simple_repeat 1 42 0 6 775 509 250 64 29 chr15 24997470 24997610 -78497364 - RSINE1 SINE B4 -1 164 20 6 775 6061 249 103 13 chr15 24997612 24997771 -78497203 + Lx7 LINE L1 5675 5826 -1870 6 775 288 0 0 0 chr15 24997771 24997803 -78497171 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 6 775 6061 249 103 13 chr15 24997803 24999482 -78495492 + Lx7 LINE L1 5827 7678 -18 6 775 228 318 34 45 chr15 25000138 25000227 -78494747 + PB1D10 SINE Alu 1 88 -29 1 775 359 113 16 0 chr15 25001556 25001618 -78493356 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 2 775 1286 230 37 61 chr15 25001621 25001755 -78493219 + ORR1D1 LTR MaLR 1 131 -243 3 775 207 0 0 0 chr15 25001755 25001778 -78493196 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 775 1286 230 37 61 chr15 25001778 25002022 -78492952 + ORR1D1 LTR MaLR 132 370 -4 3 775 396 0 0 0 chr15 25002083 25002127 -78492847 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 775 234 316 50 50 chr15 25002140 25002169 -78492805 - B4 SINE B4 -170 122 3 6 775 481 200 0 11 chr15 25002169 25002260 -78492714 - B3A SINE B2 -106 92 3 7 775 216 0 0 0 chr15 25002363 25002387 -78492587 + (GA)n Simple_repeat Simple_repeat 2 25 0 8 775 243 0 0 0 chr15 25002669 25002696 -78492278 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 9 775 437 289 138 6 chr15 25002940 25003114 -78491860 - Lx9 LINE L1 -225 7419 7223 1 775 591 146 16 0 chr15 25003162 25003285 -78491689 + Lx9 LINE L1 7513 7637 -7 1 775 327 335 114 9 chr15 25004335 25004546 -78490428 + L1M5 LINE L1 4607 4839 -1307 1 775 785 268 44 59 chr15 25004668 25004938 -78490036 + MTEa LTR MaLR 114 379 0 1 775 24 67 0 0 chr15 25004956 25005001 -78489973 + AT_rich Low_complexity Low_complexity 1 45 0 1 775 616 234 24 0 chr15 25005052 25005176 -78489798 - B3 SINE B2 -89 127 1 1 775 351 302 78 21 chr15 25005455 25005698 -78489276 + L1MDa LINE L1 282 538 -6095 1 775 415 312 123 62 chr15 25005777 25005822 -78489152 + L1MDa LINE L1 1244 1283 -5350 1 775 525 32 0 0 chr15 25005822 25005885 -78489089 + (TAGA)n Simple_repeat Simple_repeat 2 64 0 1 775 415 312 123 62 chr15 25005885 25006262 -78488712 + L1MDa LINE L1 1284 1692 -4941 1 775 212 375 12 0 chr15 25007197 25007277 -78487697 + B4A SINE B4 1 81 -211 1 775 429 20 0 0 chr15 25007278 25007328 -78487646 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 775 237 119 0 0 chr15 25008217 25008259 -78486715 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 2 775 182 385 28 19 chr15 25008751 25008857 -78486117 - L2a LINE L2 -11 3415 3309 2 775 6871 64 5 0 chr15 25009941 25010820 -78484154 - RLTR13B1 LTR ERVK 0 893 11 2 775 19448 171 76 18 chr15 25010823 25016499 -78478475 + Lx5 LINE L1 926 6912 -138 2 775 2575 78 140 156 chr15 25016868 25017388 -78477586 - RLTR1B LTR ERV1 0 512 1 2 775 10507 39 62 2 chr15 25017388 25018754 -78476220 - RLTR1B-int LTR ERV1 0 3299 1853 2 775 232 397 111 53 chr15 25018887 25019246 -78475728 - MLT1F2 LTR MaLR -146 414 35 2 775 261 140 0 0 chr15 25019443 25019500 -78475474 + (T)n Simple_repeat Simple_repeat 1 57 0 2 775 315 0 0 0 chr15 25021438 25021473 -78473501 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 775 476 68 14 0 chr15 25021602 25021675 -78473299 + (GA)n Simple_repeat Simple_repeat 2 75 0 2 775 270 0 0 0 chr15 25022304 25022334 -78472640 + (A)n Simple_repeat Simple_repeat 1 30 0 2 775 766 102 13 13 chr15 25022527 25022676 -78472298 + L1_Mus3 LINE L1 6485 6633 -5 3 775 45 45 0 0 chr15 25024118 25024184 -78470790 + AT_rich Low_complexity Low_complexity 1 66 0 3 775 789 68 0 0 chr15 25024320 25024437 -78470537 + (TC)n Simple_repeat Simple_repeat 2 118 0 3 775 632 283 65 5 chr15 25024437 25024636 -78470338 - ID_B1 SINE B4 -12 212 2 3 775 877 271 29 0 chr15 25025361 25025571 -78469403 + B3 SINE B2 1 216 0 3 775 226 148 18 18 chr15 25026327 25026382 -78468592 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 3 775 28 48 0 0 chr15 25026571 25026613 -78468361 + AT_rich Low_complexity Low_complexity 1 42 0 3 775 764 167 83 29 chr15 25026638 25026842 -78468132 - L1_Mur3 LINE L1 -4116 1764 1550 3 775 519 297 89 26 chr15 25026844 25027303 -78467671 - L1_Mur3 LINE L1 -7086 642 38 3 775 494 307 87 81 chr15 25027434 25027617 -78467357 - MER63D DNA AcHobo -627 434 262 3 775 324 94 0 0 chr15 25027617 25027670 -78467304 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 775 494 307 87 81 chr15 25027670 25027784 -78467190 - MER63D DNA AcHobo -800 261 135 3 775 482 252 76 0 chr15 25027977 25028108 -78466866 + Lx8 LINE L1 6874 7014 -459 4 775 333 0 0 0 chr15 25028147 25028184 -78466790 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 775 1778 200 104 82 chr15 25028190 25028642 -78466332 - MT2A LTR ERVL -71 462 1 4 775 300 280 111 9 chr15 25028647 25028755 -78466219 - MER63D DNA AcHobo -942 119 1 3 775 496 351 62 95 chr15 25029238 25029575 -78465399 + LTR16A LTR ERVL 30 355 -96 4 775 200 238 0 0 chr15 25029795 25029837 -78465137 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 775 270 341 87 17 chr15 25032926 25033099 -78461875 + B4 SINE B4 106 290 -2 4 775 219 387 47 0 chr15 25033605 25033711 -78461263 + L2 LINE L2 1246 1356 -2063 4 775 2337 70 66 12 chr15 25033786 25034119 -78460855 + L1_Mus1 LINE L1 6217 6567 0 4 776 2988 62 17 0 chr15 25036371 25036774 -78458200 + BGLII LTR ERVK 12 421 0 4 776 683 249 75 20 chr15 25036824 25037025 -78457949 - B3 SINE B2 0 216 5 4 776 180 125 0 0 chr15 25037383 25037415 -78457559 + (ATG)n Simple_repeat Simple_repeat 2 33 0 5 776 888 339 98 31 chr15 25037474 25038025 -78456949 + Tigger9b DNA MER2_type 37 624 0 5 776 311 231 24 49 chr15 25038021 25038103 -78456871 - PB1D9 SINE Alu -1 119 40 5 776 2968 245 45 23 chr15 25039271 25040281 -78454693 + Lx9 LINE L1 4813 5893 -1751 5 776 612 40 0 0 chr15 25040405 25040480 -78454494 + (GA)n Simple_repeat Simple_repeat 2 76 0 5 776 550 283 34 11 chr15 25040485 25040660 -78454314 + Lx9 LINE L1 6356 6534 -1110 5 776 36307 43 0 3 chr15 25040666 25047151 -78447823 - L1Md_T LINE L1 0 6585 21 5 776 726 12 0 0 chr15 25048916 25048999 -78445975 + (TC)n Simple_repeat Simple_repeat 2 84 0 5 776 387 0 0 0 chr15 25048999 25049041 -78445933 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 776 231 325 12 36 chr15 25049242 25049325 -78445649 - PB1D10 SINE Alu -13 104 24 5 776 351 393 59 57 chr15 25052668 25053159 -78441815 - LTR82B Low_complexity ERVL -54 776 285 5 776 183 146 0 0 chr15 25053476 25053517 -78441457 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 6 776 485 294 102 19 chr15 25053598 25053813 -78441161 + B4A SINE B4 1 233 -59 6 776 237 379 0 8 chr15 25053817 25053934 -78441040 + (CA)n Simple_repeat Simple_repeat 1 116 0 6 776 1360 191 25 216 chr15 25054021 25054377 -78440597 - ORR1C2 LTR MaLR 0 384 123 6 776 2579 101 20 139 chr15 25054377 25054916 -78440058 + IAPLTR2_Mm LTR ERVK 1 475 0 6 776 1360 191 25 216 chr15 25054916 25055032 -78439942 - ORR1C2 LTR MaLR -262 122 2 6 776 351 0 0 0 chr15 25055258 25055297 -78439677 + (GA)n Simple_repeat Simple_repeat 1 39 0 6 776 1576 122 47 0 chr15 25055473 25055727 -78439247 - Lx2A1 LINE L1 -5 7003 6738 6 776 471 344 32 16 chr15 25056305 25056494 -78438480 - MER53 DNA hAT 0 193 2 6 776 286 306 28 0 chr15 25056577 25056649 -78438325 + ID SINE ID 10 83 -141 6 776 920 168 89 54 chr15 25056657 25056727 -78438247 + Lx9 LINE L1 7377 7439 -205 6 776 477 0 0 0 chr15 25056727 25056780 -78438194 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 7 776 920 168 89 54 chr15 25056780 25056967 -78438007 + Lx9 LINE L1 7440 7643 -1 6 776 1068 87 0 0 chr15 25057086 25057235 -78437739 + (GGGAA)n Simple_repeat Simple_repeat 4 152 0 7 776 674 105 9 0 chr15 25057238 25057343 -78437631 + (GAA)n Simple_repeat Simple_repeat 3 108 0 7 776 369 0 0 0 chr15 25057341 25057382 -78437592 + (CAA)n Simple_repeat Simple_repeat 2 42 0 7 776 783 32 0 0 chr15 25057382 25057476 -78437498 + (GAGAA)n Simple_repeat Simple_repeat 4 97 0 7 776 533 15 15 0 chr15 25057476 25057542 -78437432 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 7 776 765 0 0 0 chr15 25057545 25057630 -78437344 + (GAAAA)n Simple_repeat Simple_repeat 4 88 0 7 776 842 300 64 21 chr15 25058123 25058590 -78436384 - L1MC1 LINE L1 -201 6132 5646 7 776 1169 299 130 44 chr15 25058991 25059677 -78435297 - Tigger6a DNA MER2_type -338 745 1 7 776 696 321 62 31 chr15 25060351 25060608 -78434366 - B4 SINE B4 -3 289 25 7 776 261 38 55 36 chr15 25061262 25061317 -78433657 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 8 776 781 256 78 5 chr15 25061455 25061647 -78433327 - B3 SINE B2 -10 206 1 8 776 738 306 60 36 chr15 25061819 25062100 -78432874 + B4 SINE B4 3 290 -2 8 776 321 136 0 0 chr15 25062100 25062166 -78432808 + (GA)n Simple_repeat Simple_repeat 1 66 0 8 776 1016 319 81 51 chr15 25062395 25063563 -78431411 + Lx8 LINE L1 4644 5908 -1565 8 776 509 152 87 0 chr15 25063592 25063730 -78431244 + (CATATA)n Simple_repeat Simple_repeat 2 151 0 8 776 305 252 83 83 chr15 25063730 25063886 -78431088 + HAL1-3A_ME LINE L1 1976 2131 -727 8 776 2222 128 52 9 chr15 25063913 25064261 -78430713 + Lx3A LINE L1 6614 6976 -5 8 776 282 29 0 0 chr15 25065023 25065058 -78429916 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 776 410 277 16 31 chr15 25066373 25066536 -78428438 - MIR SINE MIR -32 236 72 8 776 680 333 38 58 chr15 25067809 25068102 -78426872 + B4A SINE B4 6 292 0 9 776 291 38 57 0 chr15 25069285 25069338 -78425636 + (TTTTTG)n Simple_repeat Simple_repeat 2 57 0 9 776 1298 187 27 14 chr15 25069354 25069576 -78425398 + URR1B DNA MER1_type 1 225 0 9 776 867 190 7 0 chr15 25070396 25070533 -78424441 - B1_Mur3 SINE Alu -11 138 1 9 776 298 318 102 53 chr15 25070611 25070877 -78424097 - LTR33A_ LTR ERVL -13 507 229 9 776 338 353 58 26 chr15 25071239 25071393 -78423581 - LTR33A_ LTR ERVL -355 176 18 9 776 221 167 19 0 chr15 25071595 25071649 -78423325 + GA-rich Low_complexity Low_complexity 1 55 0 9 776 204 40 0 0 chr15 25072353 25072378 -78422596 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 9 776 21 36 0 0 chr15 25073321 25073349 -78421625 + AT_rich Low_complexity Low_complexity 1 28 0 9 776 1143 279 67 12 chr15 25076514 25076844 -78418130 + Lx8 LINE L1 6890 7237 -236 9 776 334 262 0 0 chr15 25077877 25077938 -78417036 + ID4_ SINE ID 3 63 -20 9 776 238 397 0 0 chr15 25077881 25077954 -78417020 + tRNA-Ala-GCG tRNA tRNA 1 73 -2 1 776 1236 63 0 0 chr15 25078229 25078371 -78416603 - B1_Mm SINE Alu -3 144 3 1 776 183 80 0 0 chr15 25078371 25078396 -78416578 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 776 405 311 0 76 chr15 25078783 25078915 -78416059 - RSINE1 SINE B4 -43 122 1 1 776 858 303 79 23 chr15 25079690 25080082 -78414892 + L1MB3 LINE L1 5549 5962 -221 1 776 390 255 198 46 chr15 25080100 25080263 -78414711 - MTE2b LTR MaLR 0 379 186 1 776 576 0 0 0 chr15 25080263 25080327 -78414647 + (CTTG)n Simple_repeat Simple_repeat 4 67 0 1 776 264 309 85 73 chr15 25080327 25080424 -78414550 - MTE2b LTR MaLR -194 185 93 1 776 1088 254 16 8 chr15 25081294 25081548 -78413426 - Lx9 LINE L1 -863 6781 6526 1 776 2879 217 168 1 chr15 25081541 25082273 -78412701 + Lx9 LINE L1 6791 7644 0 1 776 345 285 153 111 chr15 25082350 25082638 -78412336 + MLT1A0 LTR MaLR 3 302 -63 1 776 1504 97 0 5 chr15 25082644 25082840 -78412134 + B2_Mm2 SINE B2 1 195 0 1 776 211 338 14 14 chr15 25083054 25083123 -78411851 - MamSINE1 SINE tRNA -199 91 23 1 776 414 0 0 0 chr15 25083385 25083431 -78411543 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 776 519 17 0 0 chr15 25083431 25083491 -78411483 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 776 595 264 19 43 chr15 25083636 25083798 -78411176 - B4 SINE B4 -123 169 12 1 776 544 297 65 16 chr15 25084118 25084303 -78410671 + B4 SINE B4 1 194 -98 1 776 252 0 0 0 chr15 25084304 25084332 -78410642 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 776 464 48 16 0 chr15 25084332 25084394 -78410580 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 776 681 13 0 0 chr15 25085661 25085739 -78409235 + (TC)n Simple_repeat Simple_repeat 2 79 0 1 776 594 295 51 54 chr15 25086685 25087058 -78407916 - L1MC1 LINE L1 -1 6332 5961 1 776 21 36 0 0 chr15 25087324 25087352 -78407622 + AT_rich Low_complexity Low_complexity 1 28 0 1 776 2824 129 29 5 chr15 25088017 25088429 -78406545 - Lx3C LINE L1 -3 6973 6552 1 776 990 263 0 39 chr15 25089464 25089745 -78405229 - Lx6 LINE L1 -26 7434 7165 1 776 445 151 11 9 chr15 25089747 25089839 -78405135 - MTB LTR MaLR -1 406 308 1 776 40969 21 0 6 chr15 25089839 25095826 -78399148 - L1Md_A LINE L1 -14 6568 625 1 776 2202 70 92 3 chr15 25095827 25096141 -78398833 - MTB LTR MaLR -58 342 1 1 776 504 264 30 22 chr15 25096163 25096300 -78398674 - Lx6 LINE L1 -339 7121 6985 1 776 549 0 0 0 chr15 25096300 25096361 -78398613 + (TC)n Simple_repeat Simple_repeat 2 62 0 1 776 627 222 47 8 chr15 25096361 25096513 -78398461 - Lx6 LINE L1 -588 6872 6748 1 776 247 150 0 0 chr15 25096538 25096578 -78398396 - MT2B2 LTR ERVL -1 583 544 1 776 519 17 0 0 chr15 25096580 25096640 -78398334 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 776 732 259 55 128 chr15 25096640 25096985 -78397989 - MT2B LTR ERVL -281 320 1 1 776 653 175 18 61 chr15 25096985 25097149 -78397825 - MERVL_2A-int LTR ERVL 0 5761 5605 1 776 270 143 0 0 chr15 25097134 25097176 -78397798 - MERVL_2A-int LTR ERVL -71 5690 5649 1 776 11527 168 68 8 chr15 25097162 25097942 -78397032 - MERVL_2A-int LTR ERVL -3511 2250 1411 1 776 2537 70 37 22 chr15 25097942 25098264 -78396710 + ORR1A2 LTR MaLR 1 327 0 1 776 11527 168 68 8 chr15 25098264 25099606 -78395368 - MERVL_2A-int LTR ERVL -4351 1410 1 1 776 1176 169 102 60 chr15 25099606 25099921 -78395053 - MT2B LTR ERVL 0 601 274 1 776 935 177 93 16 chr15 25099944 25100166 -78394808 - MTC-int LTR MaLR -1311 269 2 1 776 1305 188 20 8 chr15 25100165 25100412 -78394562 - MTC LTR MaLR 0 421 172 1 776 427 205 0 0 chr15 25100385 25100463 -78394511 + ID_B1 SINE B4 141 218 -6 1 776 234 0 0 0 chr15 25100992 25101018 -78393956 + (A)n Simple_repeat Simple_repeat 1 26 0 1 776 977 265 71 19 chr15 25101030 25101299 -78393675 + B4 SINE B4 10 292 0 1 776 438 53 0 0 chr15 25101317 25101374 -78393600 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 776 258 123 45 15 chr15 25101389 25101455 -78393519 + CT-rich Low_complexity Low_complexity 1 68 0 1 776 348 268 0 0 chr15 25101495 25101577 -78393397 + Lx8 LINE L1 7029 7110 -363 1 776 270 0 0 0 chr15 25102178 25102208 -78392766 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1 776 783 295 14 22 chr15 25102215 25102437 -78392537 - ID_B1 SINE B4 0 224 5 1 776 1731 159 95 30 chr15 25103938 25104275 -78390699 - ORR1B2 LTR MaLR 0 367 9 1 776 386 292 115 0 chr15 25104340 25104436 -78390538 - PB1D10 SINE Alu -8 109 3 1 776 306 318 44 8 chr15 25105557 25105650 -78389324 + PB1D7 SINE Alu 17 114 -6 1 776 412 346 44 19 chr15 25105867 25106026 -78388948 - MER45A DNA Tip100 -15 163 1 1 776 251 251 40 28 chr15 25106495 25106671 -78388303 + (TA)n Simple_repeat Simple_repeat 1 178 0 1 776 583 284 40 0 chr15 25106800 25106948 -78388026 + B3A SINE B2 1 154 -44 1 776 1731 43 0 0 chr15 25107002 25107213 -78387761 - MTA_Mm LTR MaLR 0 396 186 1 776 435 0 0 0 chr15 25107211 25107261 -78387713 + MT2_Mm LTR ERVL 444 493 0 1 776 4234 6 2 0 chr15 25107415 25107886 -78387088 + L1Md_A LINE L1 5115 5586 -297 1 776 9510 3 3 0 chr15 25107886 25108875 -78386099 + L1Md_A LINE L1 5587 6578 -4 1 776 1751 52 0 2 chr15 25109155 25109376 -78385598 + L1Md_A LINE L1 5391 5607 -633 1 776 9408 12 1 0 chr15 25109376 25110371 -78384603 + L1Md_A LINE L1 5587 6582 0 1 776 702 225 24 9 chr15 25112237 25112448 -78382526 + RLTR19-int LTR ERVK 1929 2142 -3380 1 776 2449 251 63 84 chr15 25112431 25113802 -78381172 + RLTR19-int LTR ERVK 2338 3680 -2457 1 776 535 159 18 0 chr15 25113811 25113924 -78381050 + CT-rich Low_complexity Low_complexity 2 116 0 1 776 272 171 56 28 chr15 25113996 25114068 -78380906 + RLTR19-int LTR ERVK 4025 4098 -2039 1 776 43 0 0 0 chr15 25115114 25115157 -78379817 + AT_rich Low_complexity Low_complexity 1 43 0 1 776 24 0 0 0 chr15 25115234 25115258 -78379716 + AT_rich Low_complexity Low_complexity 1 24 0 1 776 951 306 18 7 chr15 25116745 25117028 -78377946 + B4A SINE B4 3 288 -4 1 776 275 345 97 9 chr15 25118463 25118552 -78376422 + B1F2 SINE Alu 15 114 -35 1 776 1026 269 113 51 chr15 25118552 25118905 -78376069 - MTE2a LTR MaLR -4 375 1 1 776 275 345 97 9 chr15 25118905 25118929 -78376045 + B1F2 SINE Alu 115 138 -11 1 776 26168 96 21 7 chr15 25119206 25124013 -78370961 - L1_Mus1 LINE L1 0 6567 1686 1 776 34054 78 1 11 chr15 25124011 25130482 -78364492 - L1Md_F2 LINE L1 0 6582 190 1 776 3183 99 21 1 chr15 25130481 25131234 -78363740 - L1VL4 LINE L1 -4164 1719 952 1 776 247 191 21 21 chr15 25131495 25131543 -78363431 + B4 SINE B4 1 48 -244 1 776 282 56 0 0 chr15 25131567 25131603 -78363371 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 1 776 387 281 96 0 chr15 25131685 25131802 -78363172 + B4 SINE B4 120 246 -46 1 776 600 237 0 0 chr15 25131803 25131955 -78363019 + GA-rich Low_complexity Low_complexity 2 153 0 1 776 300 383 16 69 chr15 25132297 25132485 -78362489 + MER5B DNA MER1_type 1 178 0 1 776 252 0 0 0 chr15 25133145 25133173 -78361801 + (A)n Simple_repeat Simple_repeat 1 28 0 1 776 802 196 160 0 chr15 25133595 25133845 -78361129 + Lx9 LINE L1 7354 7643 -1 1 776 25 75 0 0 chr15 25134084 25134137 -78360837 + AT_rich Low_complexity Low_complexity 1 53 0 1 776 349 258 176 25 chr15 25134140 25134299 -78360675 + L1MEg LINE L1 979 1161 -4923 1 776 336 24 0 0 chr15 25134306 25134347 -78360627 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1 776 283 298 60 0 chr15 25134363 25134447 -78360527 - B3A SINE B2 -109 89 1 1 776 1612 249 30 10 chr15 25134561 25134966 -78360008 + MTD LTR MaLR 4 416 -3 1 776 529 255 29 82 chr15 25135265 25135436 -78359538 - RSINE1 SINE B4 -3 162 1 1 776 507 291 38 24 chr15 25135647 25135858 -78359116 + L1MC1 LINE L1 6111 6324 -9 1 776 192 77 0 0 chr15 25136161 25136187 -78358787 + (GAAAA)n Simple_repeat Simple_repeat 3 28 0 1 776 336 274 137 23 chr15 25137047 25137178 -78357796 - HAL1-3A_ME LINE L1 -429 2429 2284 1 776 264 279 35 0 chr15 25137180 25137266 -78357708 + CT-rich Low_complexity Low_complexity 5 93 0 1 776 679 214 0 54 chr15 25137552 25137700 -78357274 + B1_Mur2 SINE Alu 3 142 -7 1 776 473 205 9 35 chr15 25138284 25138400 -78356574 - LTR40b LTR ERVL -5 514 402 1 776 564 382 31 8 chr15 25138409 25138665 -78356309 - LTR40b LTR ERVL -171 291 30 1 776 1041 16 0 0 chr15 25139148 25139271 -78355703 + (TG)n Simple_repeat Simple_repeat 2 124 0 1 776 252 0 0 0 chr15 25139988 25140016 -78354958 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1 776 4168 233 39 55 chr15 25140016 25140963 -78354011 - Lx6 LINE L1 -720 6740 5795 1 776 2711 64 0 19 chr15 25140963 25141330 -78353644 - L1Md_F2 LINE L1 0 6582 6223 1 776 4168 177 18 45 chr15 25141330 25142166 -78352808 - Lx6 LINE L1 -81 5799 4980 1 776 687 81 0 18 chr15 25142838 25142951 -78352023 - L1_Mus4 LINE L1 -6 6630 6520 1 776 365 145 0 0 chr15 25142952 25143014 -78351960 + L1_Mm LINE L1 5023 5084 -799 1 776 5578 87 30 10 chr15 25143015 25143807 -78351167 - RLTR13C2 LTR ERVK 0 808 1 1 776 2655 122 45 0 chr15 25143816 25144258 -78350716 + L1_Mur1 LINE L1 5089 5550 -336 1 776 811 309 40 45 chr15 25144515 25144875 -78350099 + Lx8 LINE L1 6190 6690 -954 1 776 402 261 92 12 chr15 25144879 25145042 -78349932 - Lx8 LINE L1 -134 7339 7164 1 776 1637 296 136 12 chr15 25145059 25145869 -78349105 + Lx8 LINE L1 6559 7468 -5 1 776 24 32 0 0 chr15 25145869 25145900 -78349074 + AT_rich Low_complexity Low_complexity 1 31 0 1 776 189 265 20 0 chr15 25146556 25146605 -78348369 + L3 LINE CR1 4313 4362 -127 1 776 261 83 0 0 chr15 25146743 25146779 -78348195 + (CG)n Simple_repeat Simple_repeat 2 37 0 1 776 261 0 0 0 chr15 25146779 25146807 -78348167 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 776 757 215 105 19 chr15 25146991 25147200 -78347774 + MTD LTR MaLR 193 419 0 1 776 1244 294 43 13 chr15 25147201 25147594 -78347380 + MTD LTR MaLR 1 405 -14 1 776 654 13 0 0 chr15 25147604 25147679 -78347295 + (GGAAA)n Simple_repeat Simple_repeat 5 79 0 1 776 29 0 0 0 chr15 25148500 25148529 -78346445 + AT_rich Low_complexity Low_complexity 1 29 0 1 776 2133 256 74 43 chr15 25148735 25149275 -78345699 + Lx8 LINE L1 6212 6758 -715 1 776 1769 182 125 11 chr15 25149275 25149626 -78345348 - ORR1B1 LTR MaLR -3 391 1 1 776 2133 256 74 43 chr15 25149626 25149812 -78345162 + Lx8 LINE L1 6759 6961 -512 1 776 1776 177 58 55 chr15 25149812 25150177 -78344797 - ORR1C1 LTR MaLR 0 378 13 1 776 6087 80 0 27 chr15 25150183 25151061 -78343913 - L1Md_F2 LINE L1 -19 6563 5710 1 776 771 333 23 28 chr15 25151090 25151488 -78343486 + Lx8 LINE L1 6963 7358 -115 1 776 24 32 0 0 chr15 25152149 25152180 -78342794 + AT_rich Low_complexity Low_complexity 1 31 0 2 776 2867 196 86 18 chr15 25152753 25152868 -78342106 - RMER1B Other Other -1 1065 945 2 776 231 36 0 0 chr15 25152868 25152896 -78342078 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 776 2867 196 86 18 chr15 25152896 25153434 -78341540 - RMER1B Other Other -122 944 369 2 776 1426 268 0 9 chr15 25153436 25153756 -78341218 + RMER1B Other Other 3 319 -747 2 776 223 321 0 0 chr15 25154190 25154243 -78340731 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 776 348 352 116 30 chr15 25158417 25158850 -78336124 + L2a LINE L2 2926 3395 -31 2 776 465 19 0 0 chr15 25160782 25160836 -78334138 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 776 293 219 15 15 chr15 25160915 25160980 -78333994 + B1_Mur4 SINE Alu 1 65 -85 2 776 559 230 56 0 chr15 25161298 25161424 -78333550 + B1_Mus1 SINE Alu 1 133 -15 2 776 373 310 168 0 chr15 25161564 25161790 -78333184 + FordPrefect DNA Tip100 1028 1291 -392 2 776 868 246 48 97 chr15 25162531 25162762 -78332212 - RLTR11B LTR ERVK -41 412 195 2 776 414 0 0 0 chr15 25162762 25162808 -78332166 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 776 868 246 48 97 chr15 25162808 25162902 -78332072 - RLTR11B LTR ERVK -259 194 97 2 776 2250 114 15 3 chr15 25162902 25163235 -78331739 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 776 868 246 48 97 chr15 25163235 25163341 -78331633 - RLTR11B LTR ERVK -357 96 2 2 776 1122 256 21 57 chr15 25163525 25163807 -78331167 + B4 SINE B4 19 290 -2 2 777 294 50 0 0 chr15 25167288 25167328 -78327646 + (A)n Simple_repeat Simple_repeat 1 40 0 2 777 267 282 14 14 chr15 25168123 25168195 -78326779 - Tigger5 DNA MER2_type 0 2406 2335 2 777 541 322 56 22 chr15 25168206 25168438 -78326536 - Tigger5 DNA MER2_type -2166 240 1 2 777 695 249 65 0 chr15 25169264 25169433 -78325541 + B3A SINE B2 1 180 -18 2 777 39 60 0 0 chr15 25169434 25169501 -78325473 + AT_rich Low_complexity Low_complexity 1 67 0 2 777 267 103 0 0 chr15 25169533 25169572 -78325402 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 777 4761 202 70 24 chr15 25169593 25170444 -78324530 - Lx7 LINE L1 -278 7418 6513 2 777 441 0 0 0 chr15 25170444 25170493 -78324481 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 777 4761 202 70 24 chr15 25170493 25170664 -78324310 - Lx7 LINE L1 -1184 6512 6348 2 777 318 319 20 47 chr15 25170734 25170766 -78324208 + Lx6 LINE L1 7276 7303 -157 2 777 274 45 0 43 chr15 25170766 25170812 -78324162 + (TTA)n Simple_repeat Simple_repeat 1 44 0 2 777 482 291 14 0 chr15 25170812 25170953 -78324021 + Lx7 LINE L1 7553 7695 -1 2 777 255 189 0 0 chr15 25171512 25171565 -78323409 + (CATA)n Simple_repeat Simple_repeat 3 55 0 2 777 446 312 53 48 chr15 25171960 25172169 -78322805 - RLTR42-int LTR ERVK -4124 1398 1189 2 777 29 28 0 0 chr15 25172272 25172308 -78322666 + AT_rich Low_complexity Low_complexity 1 36 0 2 777 583 295 36 0 chr15 25172327 25172520 -78322454 - L1MA4 LINE L1 -393 5907 5708 2 777 1997 125 3 0 chr15 25172627 25172923 -78322051 - ORR1A2 LTR MaLR -30 297 1 2 777 27 49 0 0 chr15 25173003 25173044 -78321930 + AT_rich Low_complexity Low_complexity 1 41 0 2 777 414 0 0 0 chr15 25173756 25173802 -78321172 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 777 1311 286 104 22 chr15 25173839 25174466 -78320508 + L1MA6 LINE L1 5616 6293 -7 2 777 39 68 0 0 chr15 25174475 25174549 -78320425 + AT_rich Low_complexity Low_complexity 1 74 0 2 777 333 0 0 0 chr15 25175008 25175045 -78319929 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 777 1061 255 55 49 chr15 25175350 25175697 -78319277 - ORR1E LTR MaLR -6 353 5 2 777 37118 43 0 15 chr15 25175716 25180874 -78314100 + L1Md_A LINE L1 510 5586 -297 2 777 9041 31 0 1 chr15 25180874 25181871 -78313103 + L1Md_A LINE L1 5587 6582 0 2 777 319 330 43 32 chr15 25182190 25182375 -78312599 - MER5A DNA MER1_type -1 188 2 2 777 599 0 14 0 chr15 25182933 25183004 -78311970 + (TC)n Simple_repeat Simple_repeat 1 72 0 2 777 33 25 0 0 chr15 25183287 25183327 -78311647 + AT_rich Low_complexity Low_complexity 1 40 0 2 777 552 15 0 0 chr15 25183349 25183414 -78311560 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 2 777 207 0 0 0 chr15 25183726 25183749 -78311225 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 777 573 15 0 0 chr15 25183764 25183830 -78311144 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 2 777 534 186 239 0 chr15 25183831 25183944 -78311030 - B1_Mus2 SINE Alu -7 140 1 2 777 435 379 22 11 chr15 25184803 25184982 -78309992 - LTR16B1 LTR ERVL -285 195 15 2 777 1085 78 0 0 chr15 25185139 25185281 -78309693 + B2_Mm2 SINE B2 1 142 -53 2 777 789 79 0 0 chr15 25185281 25185395 -78309579 + (TA)n Simple_repeat Simple_repeat 1 114 0 2 777 1142 63 44 0 chr15 25186506 25186665 -78308309 - L1_Mus2 LINE L1 -47 6519 6354 2 777 1199 249 91 65 chr15 25187061 25187139 -78307835 - Lx7 LINE L1 -28 7668 7573 2 777 554 41 14 0 chr15 25187139 25187212 -78307762 + (TC)n Simple_repeat Simple_repeat 2 75 0 2 777 1199 249 91 65 chr15 25187212 25187670 -78307304 - Lx7 LINE L1 -124 7572 7119 2 777 730 143 83 8 chr15 25188319 25188435 -78306539 + B1_Mus1 SINE Alu 1 126 -22 2 777 477 0 0 0 chr15 25188435 25188488 -78306486 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 777 875 173 0 6 chr15 25188494 25188668 -78306306 + GA-rich Low_complexity Low_complexity 1 173 0 2 777 8093 114 7 60 chr15 25188766 25190682 -78304292 - Lx LINE L1 -3 6651 4868 2 777 396 338 44 7 chr15 25190693 25190830 -78304144 + B4A SINE B4 133 274 -18 2 777 297 75 0 0 chr15 25190949 25190989 -78303985 + (T)n Simple_repeat Simple_repeat 1 40 0 2 777 1016 45 0 29 chr15 25190989 25191125 -78303849 - B1_Mm SINE Alu 0 147 16 2 777 357 256 39 16 chr15 25191387 25191531 -78303443 + B3 SINE B2 1 190 -26 2 777 210 192 0 0 chr15 25191997 25192049 -78302925 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 777 659 307 28 62 chr15 25192052 25192410 -78302564 - Lx9 LINE L1 -136 7508 7163 2 777 959 280 75 50 chr15 25192406 25192767 -78302207 + Lx9 LINE L1 6465 6834 -810 2 777 821 258 18 49 chr15 25192770 25192994 -78301980 - Lx8 LINE L1 -532 6941 6725 2 777 1158 256 116 38 chr15 25193026 25193424 -78301550 + RLTR20B3 LTR ERVK 93 521 -56 2 777 263 225 123 12 chr15 25193502 25193583 -78301391 + Lx8 LINE L1 7233 7322 -151 2 777 401 382 10 5 chr15 25193583 25193788 -78301186 - Lx8 LINE L1 -258 7215 7010 2 777 587 81 0 11 chr15 25193815 25193902 -78301072 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 2 777 663 332 5 0 chr15 25194215 25194420 -78300554 + Lx8 LINE L1 6430 6635 -838 2 777 724 337 115 39 chr15 25194534 25195046 -78299928 + Lx8 LINE L1 6782 7332 -141 2 777 632 282 117 16 chr15 25195117 25195460 -78299514 - MTD LTR MaLR -13 406 1 2 777 658 139 252 0 chr15 25195677 25195792 -78299182 + B1_Mur4 SINE Alu 2 145 -5 2 777 863 149 0 7 chr15 25195792 25195947 -78299027 + GA-rich Low_complexity Low_complexity 2 155 0 2 777 186 320 13 19 chr15 25195923 25196079 -78298895 + A-rich Low_complexity Low_complexity 2 156 0 2 777 612 299 71 17 chr15 25197183 25197421 -78297553 - MER57F LTR ERV1 -6 430 180 2 777 764 250 68 11 chr15 25197423 25197613 -78297361 - ID_B1 SINE B4 -23 201 1 2 777 1407 125 42 92 chr15 25197727 25197965 -78297009 - URR1A DNA MER1_type 0 226 1 2 777 1599 63 16 0 chr15 25198030 25198219 -78296755 + B2_Mm2 SINE B2 1 192 -3 2 777 216 86 0 0 chr15 25198629 25198664 -78296310 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2 777 387 0 0 0 chr15 25199726 25199769 -78295205 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 777 1244 62 0 0 chr15 25200798 25200944 -78294030 + B1_Mus2 SINE Alu 2 147 0 2 777 1145 117 0 17 chr15 25201956 25202130 -78292844 - B2_Mm2 SINE B2 -23 172 2 2 777 498 308 58 114 chr15 25202341 25202718 -78292256 - MLT1C LTR MaLR -5 385 30 2 777 824 167 217 0 chr15 25203133 25203313 -78291661 + URR1A DNA MER1_type 1 219 -7 2 777 269 209 29 43 chr15 25203787 25203857 -78291117 + L1MD3 LINE L1 7907 7975 -20 2 777 193 172 17 33 chr15 25204268 25204328 -78290646 + GA-rich Low_complexity Low_complexity 4 62 0 2 777 1580 44 39 0 chr15 25205418 25205600 -78289374 - B2_Mm2 SINE B2 -5 190 2 2 777 21 36 0 0 chr15 25207673 25207701 -78287273 + AT_rich Low_complexity Low_complexity 1 28 0 2 777 276 308 29 108 chr15 25207751 25207957 -78287017 + L1M1 LINE L1 5633 5823 -477 2 777 507 355 11 11 chr15 25208635 25208817 -78286157 + B3A SINE B2 1 182 -16 2 777 823 229 118 0 chr15 25208849 25209019 -78285955 + B3 SINE B2 6 195 -21 2 777 377 332 136 45 chr15 25209372 25209593 -78285381 + MTEb LTR MaLR 43 283 -96 2 777 2383 133 75 79 chr15 25209615 25210121 -78284853 + RLTR28 LTR ERVL 1 504 -20 2 777 1338 84 28 17 chr15 25210397 25210578 -78284396 + B2_Mm1t SINE B2 1 183 -10 2 777 194 0 0 37 chr15 25210712 25210739 -78284235 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2 777 31 0 0 0 chr15 25211110 25211141 -78283833 + AT_rich Low_complexity Low_complexity 1 31 0 2 777 203 75 75 0 chr15 25211318 25211358 -78283616 + (CAAAAA)n Simple_repeat Simple_repeat 2 44 0 2 777 582 319 89 101 chr15 25211612 25212038 -78282936 - MLT1F2 LTR MaLR -25 535 115 2 777 1073 258 124 27 chr15 25212330 25212661 -78282313 - ORR1D2 LTR MaLR -3 367 5 2 777 194 156 0 22 chr15 25212908 25212954 -78282020 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 777 646 280 28 22 chr15 25212957 25213136 -78281838 - B3A SINE B2 -18 180 1 2 777 354 314 86 45 chr15 25215571 25215791 -78279183 - L2a LINE L2 0 3426 3198 2 777 420 197 124 104 chr15 25216919 25217112 -78277862 - Lx9 LINE L1 -1 7643 7447 2 777 23 0 0 0 chr15 25217543 25217566 -78277408 + AT_rich Low_complexity Low_complexity 1 23 0 2 777 384 302 29 7 chr15 25218168 25218308 -78276666 - Charlie2a DNA MER1_type -204 2657 2515 3 777 1100 76 7 0 chr15 25218574 25218719 -78276255 + B1_Mus2 SINE Alu 1 146 -1 3 777 378 0 0 0 chr15 25218780 25218822 -78276152 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 777 349 354 74 9 chr15 25219312 25219529 -78275445 - Charlie2a DNA MER1_type -2622 239 9 3 777 307 312 107 14 chr15 25219961 25220101 -78274873 + Lx9 LINE L1 7316 7468 -176 3 777 274 312 34 51 chr15 25221778 25221896 -78273078 + PB1 SINE Alu 5 120 -7 3 777 30 0 0 0 chr15 25221978 25222008 -78272966 + AT_rich Low_complexity Low_complexity 1 30 0 3 777 31 26 0 0 chr15 25222603 25222641 -78272333 + AT_rich Low_complexity Low_complexity 1 38 0 3 777 279 208 56 0 chr15 25223499 25223571 -78271403 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 3 777 319 171 12 62 chr15 25224128 25224209 -78270765 + MLT2C1 LTR ERVL 150 226 -171 3 777 236 348 108 29 chr15 25225226 25225430 -78269544 - MLT2C2 LTR ERVL -233 231 12 3 777 392 0 21 0 chr15 25226029 25226077 -78268897 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 777 465 19 0 0 chr15 25226757 25226811 -78268163 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 777 302 0 26 0 chr15 25227035 25227073 -78267901 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 777 683 34 22 0 chr15 25227451 25227540 -78267434 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 3 777 444 244 23 0 chr15 25228006 25228092 -78266882 + Lx9 LINE L1 6306 6393 -1251 3 777 541 234 0 154 chr15 25228107 25228289 -78266685 - B4 SINE B4 -131 161 8 3 777 267 264 8 109 chr15 25228460 25228579 -78266395 - LTR33A LTR ERVL -1 519 413 3 777 232 295 58 72 chr15 25228692 25228831 -78266143 - LTR33A LTR ERVL -288 215 79 3 777 304 298 248 24 chr15 25229153 25229528 -78265446 - L2a LINE L2 -44 3382 2924 3 777 27 0 0 0 chr15 25229545 25229572 -78265402 + AT_rich Low_complexity Low_complexity 1 27 0 3 777 4714 218 66 8 chr15 25229584 25230693 -78264281 - Lx9 LINE L1 -12 7632 6460 3 777 609 200 32 8 chr15 25230926 25231052 -78263922 - Lx9 LINE L1 -730 6914 6786 3 777 254 221 11 44 chr15 25231171 25231261 -78263713 + (TATATG)n Simple_repeat Simple_repeat 5 91 0 3 777 323 229 36 27 chr15 25231297 25231409 -78263565 + (TG)n Simple_repeat Simple_repeat 2 114 0 3 777 581 296 35 26 chr15 25231542 25231774 -78263200 - B4A SINE B4 -50 242 9 3 777 225 94 0 0 chr15 25233014 25233046 -78261928 + (T)n Simple_repeat Simple_repeat 1 32 0 3 777 326 287 103 48 chr15 25233509 25233674 -78261300 + MLT1D LTR MaLR 305 478 -27 3 777 677 82 0 0 chr15 25234189 25234286 -78260688 + BC1_Mm scRNA scRNA 1 97 -55 3 777 335 278 217 24 chr15 25234295 25234461 -78260513 + Lx6 LINE L1 7258 7455 -5 3 777 269 103 0 0 chr15 25234698 25234737 -78260237 - RLTR25A LTR ERVK 0 1103 1065 3 777 252 0 0 0 chr15 25234739 25234767 -78260207 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 777 1291 77 27 27 chr15 25235245 25235431 -78259543 - B2_Mm2 SINE B2 -9 186 1 3 777 798 238 88 14 chr15 25235461 25235678 -78259296 - RLTR25B LTR ERVK -175 853 621 3 777 4865 135 20 185 chr15 25235707 25236447 -78258527 + L1_Mus4 LINE L1 365 1123 -5511 3 777 1137 78 0 0 chr15 25236447 25236589 -78258385 + B1_Mus1 SINE Alu 1 142 -6 3 777 447 19 0 0 chr15 25236591 25236643 -78258331 + (GAAA)n Simple_repeat Simple_repeat 3 54 0 3 777 21248 147 124 30 chr15 25236643 25239905 -78255069 + L1_Mus4 LINE L1 1124 4732 -1151 3 777 207 0 0 0 chr15 25239905 25239928 -78255046 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3 777 21248 108 68 3 chr15 25239928 25241822 -78253152 + L1_Mus4 LINE L1 4733 6627 -9 3 777 2567 185 53 22 chr15 25241822 25242365 -78252609 - RLTR25B LTR ERVK -468 560 1 3 777 1088 84 0 7 chr15 25243457 25243592 -78251382 + B1_Mus1 SINE Alu 2 136 -12 3 777 722 11 11 0 chr15 25243592 25243679 -78251295 + (GGAA)n Simple_repeat Simple_repeat 3 90 0 3 777 452 68 14 0 chr15 25243878 25243951 -78251023 + (TTTTTG)n Simple_repeat Simple_repeat 5 78 0 3 777 1149 76 0 7 chr15 25243952 25244097 -78250877 - B1_Mus2 SINE Alu -2 145 2 3 777 1426 208 58 23 chr15 25244165 25244221 -78250753 - ORR1D2 LTR MaLR -2 368 314 3 777 243 0 0 0 chr15 25244221 25244248 -78250726 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 3 777 1426 208 58 23 chr15 25244248 25244535 -78250439 - ORR1D2 LTR MaLR -57 313 13 3 777 2739 99 46 21 chr15 25245070 25245503 -78249471 + Lx3B LINE L1 6530 6973 0 3 777 24 0 0 0 chr15 25245509 25245533 -78249441 + AT_rich Low_complexity Low_complexity 1 24 0 3 777 469 324 69 77 chr15 25246520 25246794 -78248180 + B4 SINE B4 2 273 -19 3 777 477 0 0 0 chr15 25246828 25246881 -78248093 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 777 331 340 50 31 chr15 25247002 25247163 -78247811 + MLT1F2 LTR MaLR 331 494 -66 3 777 262 290 56 16 chr15 25248364 25248490 -78246484 + L1ME2z LINE L1 6297 6427 -17 3 777 385 232 10 50 chr15 25249021 25249121 -78245853 + MTE2b LTR MaLR 1 96 -283 3 777 210 37 0 0 chr15 25250088 25250115 -78244859 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 777 195 42 0 0 chr15 25253405 25253429 -78241545 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 777 1133 108 84 0 chr15 25253431 25253597 -78241377 - B2_Mm2 SINE B2 -15 180 1 3 777 243 321 26 35 chr15 25254107 25254223 -78240751 + L1MC LINE L1 5493 5607 -737 3 777 1284 89 0 0 chr15 25254310 25254490 -78240484 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 3 777 666 68 0 0 chr15 25254492 25254580 -78240394 + (GAAA)n Simple_repeat Simple_repeat 2 89 0 3 777 707 346 5 75 chr15 25254886 25255286 -78239688 - L1_Rod LINE L1 -15 5832 5461 3 777 366 350 103 39 chr15 25255309 25255717 -78239257 + L1MB8 LINE L1 5701 6134 -44 3 777 718 268 33 23 chr15 25255731 25255945 -78239029 + B3 SINE B2 1 216 0 3 777 201 39 0 0 chr15 25256938 25256964 -78238010 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 3 777 1582 74 75 75 chr15 25256965 25257244 -78237730 - Lx LINE L1 -7 6647 6369 3 777 950 132 6 0 chr15 25257700 25257859 -78237115 + (GA)n Simple_repeat Simple_repeat 1 160 0 3 777 1095 82 7 7 chr15 25257954 25258102 -78236872 + B1_Mus1 SINE Alu 1 148 0 3 777 2137 90 48 0 chr15 25258186 25258498 -78236476 + Lx2 LINE L1 6670 6996 -1 3 777 830 174 227 0 chr15 25258526 25258698 -78236276 + B3 SINE B2 1 211 -5 3 777 412 169 14 39 chr15 25259163 25259283 -78235691 + PB1D10 SINE Alu 16 122 -25 3 777 183 42 0 0 chr15 25260237 25260261 -78234713 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 3 777 189 0 0 0 chr15 25260259 25260280 -78234694 + (T)n Simple_repeat Simple_repeat 1 21 0 3 777 201 171 0 0 chr15 25260688 25260723 -78234251 + T-rich Low_complexity Low_complexity 1 35 0 3 777 627 26 0 0 chr15 25261139 25261216 -78233758 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 777 2207 185 82 10 chr15 25262252 25262739 -78232235 + RMER5 LTR ERV1 13 534 0 3 777 192 152 0 0 chr15 25262761 25262794 -78232180 + CT-rich Low_complexity Low_complexity 2 34 0 3 777 825 167 6 0 chr15 25263100 25263256 -78231718 + URR1A DNA MER1_type 70 226 0 3 777 337 287 59 108 chr15 25263333 25263536 -78231438 - MER58B DNA MER1_type -24 317 125 3 777 315 166 49 0 chr15 25263596 25263678 -78231296 + PB1D10 SINE Alu 17 101 -16 3 777 239 203 14 0 chr15 25263708 25263777 -78231197 + GA-rich Low_complexity Low_complexity 2 71 0 3 777 1174 54 0 20 chr15 25264146 25264296 -78230678 + B1_Mus1 SINE Alu 1 147 -1 3 777 1379 104 5 0 chr15 25264776 25264969 -78230005 - B2_Mm2 SINE B2 -1 194 1 3 777 972 266 102 41 chr15 25265189 25265553 -78229421 + Lx8 LINE L1 7079 7464 -9 3 777 2236 109 29 34 chr15 25265960 25266340 -78228634 + Lx2 LINE L1 6618 6995 -2 3 777 194 125 21 0 chr15 25266340 25266388 -78228586 + (CAAAA)n Simple_repeat Simple_repeat 1 49 0 3 777 292 299 0 30 chr15 25266458 25266558 -78228416 - MER5A DNA MER1_type -30 159 63 3 777 1959 70 22 7 chr15 25266598 25266872 -78228102 - L1_Mus3 LINE L1 0 6638 6361 3 777 21 0 0 0 chr15 25266949 25266970 -78228004 + AT_rich Low_complexity Low_complexity 1 21 0 3 777 660 123 0 0 chr15 25267171 25267285 -78227689 + (GA)n Simple_repeat Simple_repeat 2 115 0 3 777 232 48 48 0 chr15 25267521 25267563 -78227411 + (TTTTTG)n Simple_repeat Simple_repeat 4 47 0 3 777 589 306 60 90 chr15 25267563 25267897 -78227077 - ORR1E LTR MaLR -10 349 26 3 777 486 0 0 0 chr15 25268262 25268316 -78226658 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 777 216 97 0 0 chr15 25268316 25268346 -78226628 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 777 227 238 193 45 chr15 25268346 25268434 -78226540 + B4A SINE B4 114 214 -78 3 777 237 108 0 0 chr15 25268516 25268553 -78226421 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 777 405 54 0 0 chr15 25268553 25268609 -78226365 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 777 468 0 0 0 chr15 25268609 25268660 -78226314 + (GA)n Simple_repeat Simple_repeat 2 53 0 3 777 341 319 17 42 chr15 25269901 25270019 -78224955 - B1F SINE Alu -8 141 27 3 777 216 324 98 0 chr15 25270071 25270173 -78224801 - L2a LINE L2 -22 3404 3293 3 777 640 98 30 8 chr15 25270190 25270324 -78224650 + (TAGA)n Simple_repeat Simple_repeat 2 138 0 3 777 1138 300 43 53 chr15 25270581 25271094 -78223880 - L1MB5 LINE L1 -8 6166 5659 3 777 780 258 9 32 chr15 25271103 25271319 -78223655 - B3 SINE B2 -5 211 1 3 777 426 204 0 0 chr15 25272813 25272906 -78222068 + (TG)n Simple_repeat Simple_repeat 2 94 0 3 777 493 283 132 24 chr15 25272947 25273197 -78221777 - B4A SINE B4 -15 277 1 3 777 25 31 0 0 chr15 25273526 25273558 -78221416 + AT_rich Low_complexity Low_complexity 1 32 0 3 777 22 0 0 0 chr15 25273874 25273896 -78221078 + AT_rich Low_complexity Low_complexity 1 22 0 4 777 1340 252 61 25 chr15 25274302 25274664 -78220310 - MTE2b LTR MaLR -2 377 3 4 777 197 100 0 48 chr15 25275474 25275516 -78219458 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 4 777 213 180 0 0 chr15 25275514 25275564 -78219410 + (TCCG)n Simple_repeat Simple_repeat 3 52 0 4 777 405 0 0 0 chr15 25275564 25275609 -78219365 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 4 777 1204 253 97 34 chr15 25275760 25276141 -78218833 - MTD LTR MaLR -14 405 1 4 777 439 333 109 64 chr15 25277024 25277637 -78217337 + MER44D DNA MER2_type 8 648 -57 4 777 3356 5 0 0 chr15 25280093 25280461 -78214513 + L1Md_A LINE L1 5219 5586 -297 4 777 9075 9 0 0 chr15 25280461 25281457 -78213517 + L1Md_A LINE L1 5587 6582 0 4 777 313 284 29 10 chr15 25281464 25281567 -78213407 + MER5A1 DNA MER1_type 61 165 -1 4 777 262 345 56 20 chr15 25282839 25283037 -78211937 - MIRb SINE MIR -6 262 58 4 777 198 344 62 62 chr15 25284955 25285019 -78209955 - L2 LINE L2 -517 2902 2838 4 777 351 0 0 0 chr15 25285019 25285058 -78209916 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 777 198 344 62 62 chr15 25285058 25285201 -78209773 - L2 LINE L2 -582 2837 2695 4 777 811 169 87 38 chr15 25285416 25285600 -78209374 - B2_Mm2 SINE B2 -1 194 2 4 777 235 52 86 0 chr15 25285791 25285849 -78209125 + (GTTTG)n Simple_repeat Simple_repeat 2 64 0 4 777 465 331 6 6 chr15 25286572 25286736 -78208238 - RSINE1 SINE B4 -1 164 1 4 777 665 283 147 11 chr15 25286789 25287075 -78207899 - MER2 DNA MER2_type -20 325 1 4 777 270 287 122 0 chr15 25287405 25287520 -78207454 - B1_Mus2 SINE Alu -17 130 2 4 777 634 243 168 0 chr15 25287834 25288019 -78206955 + B3 SINE B2 1 216 0 4 777 441 0 0 0 chr15 25288284 25288333 -78206641 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 777 28 0 0 0 chr15 25288444 25288472 -78206502 + AT_rich Low_complexity Low_complexity 1 28 0 4 777 990 167 0 0 chr15 25289493 25289673 -78205301 + GA-rich Low_complexity Low_complexity 1 180 0 4 777 659 252 8 0 chr15 25290360 25290491 -78204483 + B1_Mur1 SINE Alu 3 134 -15 4 777 195 42 0 0 chr15 25290491 25290515 -78204459 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4 777 1223 190 70 33 chr15 25290723 25291023 -78203951 + Lx4B LINE L1 6747 7057 -1 4 777 713 43 0 11 chr15 25292128 25292222 -78202752 + (TTTC)n Simple_repeat Simple_repeat 2 94 0 4 777 201 162 0 0 chr15 25293108 25293145 -78201829 + T-rich Low_complexity Low_complexity 1 37 0 4 777 195 114 0 0 chr15 25293212 25293247 -78201727 + (T)n Simple_repeat Simple_repeat 1 35 0 4 777 186 143 0 0 chr15 25293792 25293827 -78201147 + (TTTTC)n Simple_repeat Simple_repeat 3 37 0 4 777 194 116 23 0 chr15 25293887 25293930 -78201044 + (GA)n Simple_repeat Simple_repeat 2 45 0 4 777 29 78 0 0 chr15 25294016 25294080 -78200894 + GC_rich Low_complexity Low_complexity 1 64 0 4 777 29 78 0 0 chr15 25294298 25294362 -78200612 + GC_rich Low_complexity Low_complexity 1 64 0 4 778 504 0 0 0 chr15 25297599 25297655 -78197319 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 778 1018 174 102 14 chr15 25297655 25297871 -78197103 + ORR1D1 LTR MaLR 137 371 -3 4 778 445 228 126 13 chr15 25297909 25298060 -78196914 - B4 SINE B4 -74 218 51 4 778 342 0 0 0 chr15 25299844 25299882 -78195092 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 778 492 293 13 32 chr15 25301629 25301784 -78193190 + B4A SINE B4 2 153 -139 4 778 270 56 0 0 chr15 25301896 25301932 -78193042 + (TC)n Simple_repeat Simple_repeat 1 36 0 4 778 381 324 0 59 chr15 25303408 25303526 -78191448 + PB1D10 SINE Alu 3 113 -4 4 778 477 50 0 0 chr15 25304117 25304177 -78190797 + (GGGA)n Simple_repeat Simple_repeat 4 63 0 4 778 465 110 0 0 chr15 25304426 25304508 -78190466 + (GA)n Simple_repeat Simple_repeat 1 82 0 4 778 227 278 26 77 chr15 25304820 25304937 -78190037 - MIR SINE MIR -89 179 69 4 778 183 114 0 0 chr15 25305781 25305816 -78189158 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 778 1413 157 123 29 chr15 25310014 25310182 -78184792 + RMER17C LTR ERVK 2 194 -216 4 778 1137 128 0 0 chr15 25310182 25310362 -78184612 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 4 778 1413 157 123 29 chr15 25310362 25310567 -78184407 + RMER17C LTR ERVK 195 410 0 4 778 459 0 0 0 chr15 25311831 25311882 -78183092 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 778 216 0 0 0 chr15 25312300 25312324 -78182650 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 778 230 218 0 0 chr15 25312759 25312817 -78182157 - L1_Mur3 LINE L1 -570 5598 5528 4 778 400 240 0 65 chr15 25314802 25314909 -78180065 + PB1D10 SINE Alu 1 100 -17 4 778 378 0 0 0 chr15 25315164 25315206 -78179768 + (ATTG)n Simple_repeat Simple_repeat 2 43 0 4 778 388 240 0 59 chr15 25316024 25316126 -78178848 + ID_B1 SINE B4 55 150 -74 4 778 22 0 0 0 chr15 25316902 25316924 -78178050 + AT_rich Low_complexity Low_complexity 1 22 0 4 778 733 157 157 0 chr15 25318571 25318730 -78176244 + URR1A DNA MER1_type 1 184 -42 4 778 306 0 0 0 chr15 25319997 25320031 -78174943 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 778 246 226 19 0 chr15 25320271 25320324 -78174650 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 778 195 42 0 0 chr15 25320509 25320533 -78174441 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 4 778 253 270 0 0 chr15 25321496 25321559 -78173415 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 778 480 35 0 0 chr15 25321724 25321782 -78173192 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 778 811 286 22 7 chr15 25322132 25322407 -78172567 + L1MC1 LINE L1 6054 6332 -1 4 778 1084 81 0 0 chr15 25324224 25324360 -78170614 + B1_Mus2 SINE Alu 2 137 -10 4 778 351 0 0 0 chr15 25324360 25324399 -78170575 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 778 685 189 8 8 chr15 25324518 25324651 -78170323 + B1_Mur1 SINE Alu 5 137 -12 4 778 186 43 0 0 chr15 25324652 25324675 -78170299 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 778 270 0 0 0 chr15 25324676 25324706 -78170268 + (TAAAA)n Simple_repeat Simple_repeat 3 32 0 4 778 261 0 0 0 chr15 25325782 25325811 -78169163 + (A)n Simple_repeat Simple_repeat 1 29 0 4 778 26 0 0 0 chr15 25326625 25326651 -78168323 + AT_rich Low_complexity Low_complexity 1 26 0 4 778 216 0 0 0 chr15 25326841 25326865 -78168109 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 778 380 118 0 0 chr15 25327357 25327408 -78167566 - Lx4B LINE L1 -130 6928 6878 4 778 496 129 32 8 chr15 25328154 25328279 -78166695 + (TA)n Simple_repeat Simple_repeat 2 129 0 4 778 653 253 81 0 chr15 25329318 25329492 -78165482 + B3A SINE B2 1 188 -10 4 778 22 0 0 0 chr15 25329559 25329581 -78165393 + AT_rich Low_complexity Low_complexity 1 22 0 4 778 183 42 0 0 chr15 25329641 25329665 -78165309 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4 778 1380 105 0 0 chr15 25331121 25331311 -78163663 - L1_Mus4 LINE L1 -353 6283 6094 4 778 1777 112 78 0 chr15 25331311 25331579 -78163395 + L1_Mus4 LINE L1 6343 6631 -5 4 778 525 273 120 17 chr15 25332898 25333073 -78161901 + MLT1B LTR MaLR 1 193 -197 4 778 755 227 108 33 chr15 25333091 25333305 -78161669 + MTEb LTR MaLR 1 230 -149 4 778 291 329 47 14 chr15 25333295 25333443 -78161531 + MLT1B LTR MaLR 222 374 -16 4 778 194 0 39 0 chr15 25336137 25336163 -78158811 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 778 309 285 116 11 chr15 25338124 25338273 -78156701 - MIR SINE MIR -75 187 29 4 778 212 290 16 16 chr15 25339089 25339152 -78155822 + (TATG)n Simple_repeat Simple_repeat 4 66 0 4 778 269 169 17 0 chr15 25340105 25340164 -78154810 + (TATG)n Simple_repeat Simple_repeat 2 61 0 4 778 267 173 0 0 chr15 25343458 25343510 -78151464 + (CCG)n Simple_repeat Simple_repeat 2 53 0 4 778 343 241 0 35 chr15 25343530 25343672 -78151302 + (CCCCG)n Simple_repeat Simple_repeat 1 137 0 4 778 212 0 36 0 chr15 25343877 25343905 -78151069 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 4 778 313 218 32 8 chr15 25345055 25345180 -78149794 + CT-rich Low_complexity Low_complexity 3 130 0 4 778 356 233 55 0 chr15 25345435 25345508 -78149466 - MER20 DNA MER1_type -137 82 6 4 778 24 0 0 0 chr15 25345763 25345787 -78149187 + AT_rich Low_complexity Low_complexity 1 24 0 4 778 245 271 0 79 chr15 25346025 25346101 -78148873 + ID4 SINE ID 1 70 -13 4 778 495 0 0 0 chr15 25346107 25346162 -78148812 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 778 524 106 0 12 chr15 25347381 25347467 -78147507 + (TGG)n Simple_repeat Simple_repeat 1 85 0 4 778 197 33 0 32 chr15 25347463 25347494 -78147480 + (GTTTG)n Simple_repeat Simple_repeat 3 32 0 4 778 233 128 0 21 chr15 25347495 25347543 -78147431 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 4 778 522 196 0 0 chr15 25348686 25348793 -78146181 + G-rich Low_complexity Low_complexity 4 110 0 4 778 1267 52 0 22 chr15 25348793 25348971 -78146003 + (GGGAGA)n Simple_repeat Simple_repeat 5 178 0 4 778 621 0 0 0 chr15 25348972 25349041 -78145933 + (GGGAA)n Simple_repeat Simple_repeat 1 69 0 4 778 264 109 43 0 chr15 25349041 25349087 -78145887 + GA-rich Low_complexity Low_complexity 1 48 0 4 778 442 218 128 68 chr15 25349131 25349370 -78145604 + Lx8 LINE L1 7212 7685 -11 4 778 27 29 0 0 chr15 25349372 25349406 -78145568 + AT_rich Low_complexity Low_complexity 1 34 0 4 778 2313 162 42 7 chr15 25349498 25349903 -78145071 + MTC LTR MaLR 3 421 0 4 778 1932 285 130 27 chr15 25350764 25351549 -78143425 - Lx8 LINE L1 -10 7463 6594 4 778 2627 164 73 4 chr15 25351549 25352039 -78142935 + RLTR28 LTR ERVL 1 524 0 4 778 1932 285 130 27 chr15 25352039 25352069 -78142905 - Lx8 LINE L1 -880 6593 6564 4 778 315 0 0 0 chr15 25352146 25352181 -78142793 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 778 2726 176 50 57 chr15 25352436 25352493 -78142481 - RMER15 LTR ERVL 0 575 508 4 778 3198 71 28 0 chr15 25352493 25352889 -78142085 + MTB_Mm LTR MaLR 1 407 0 5 778 2726 176 50 57 chr15 25352889 25353410 -78141564 - RMER15 LTR ERVL -68 507 2 4 778 184 339 81 0 chr15 25353696 25353758 -78141216 - L4 LINE RTE -209 1820 1754 5 778 2964 149 25 12 chr15 25353785 25354302 -78140672 - RLTR28 LTR ERVL 0 524 1 5 778 249 250 0 16 chr15 25354719 25354780 -78140194 + CT-rich Low_complexity Low_complexity 2 61 0 5 778 24 32 0 0 chr15 25354917 25354948 -78140026 + AT_rich Low_complexity Low_complexity 1 31 0 5 778 280 250 8 100 chr15 25355683 25355803 -78139171 - MER58A DNA MER1_type -80 144 36 5 778 1374 68 0 11 chr15 25355949 25356127 -78138847 - B2_Mm2 SINE B2 -17 178 3 5 778 715 75 9 9 chr15 25357271 25357378 -78137596 - Lx LINE L1 -12 6642 6536 5 778 180 0 0 0 chr15 25357378 25357398 -78137576 + (CCCA)n Simple_repeat Simple_repeat 1 20 0 5 778 2769 147 8 23 chr15 25357667 25358148 -78136826 + RMER6A LTR ERVK 86 559 -197 5 778 325 242 15 0 chr15 25358162 25358228 -78136746 - B1_Mur3 SINE Alu -79 70 4 5 778 2564 218 107 101 chr15 25358757 25359609 -78135365 + Lx7 LINE L1 6840 7696 0 5 778 268 236 111 0 chr15 25359815 25359887 -78135087 + ID4_ SINE ID 2 81 -2 5 778 309 240 170 0 chr15 25360095 25360195 -78134779 - PB1D10 SINE Alu 0 117 1 5 778 253 369 33 13 chr15 25360674 25360825 -78134149 + MLT1I LTR MaLR 59 212 -199 5 778 503 173 29 0 chr15 25361135 25361274 -78133700 + CT-rich Low_complexity Low_complexity 2 144 0 5 778 1627 239 92 15 chr15 25361335 25361802 -78133172 - Lx7 LINE L1 -285 7411 6909 5 778 594 75 0 0 chr15 25362583 25362663 -78132311 + (TCCC)n Simple_repeat Simple_repeat 1 80 0 5 778 683 308 132 50 chr15 25362920 25363262 -78131712 + MTE2a LTR MaLR 1 370 -9 5 778 393 373 119 19 chr15 25363401 25363495 -78131479 + HAL1 LINE L1 780 882 -1625 5 778 3172 52 10 17 chr15 25363495 25363905 -78131069 + MTB_Mm LTR MaLR 1 407 0 5 778 393 373 119 19 chr15 25363905 25364179 -78130795 + HAL1 LINE L1 883 1184 -1323 5 778 341 217 17 201 chr15 25364179 25364358 -78130616 + Lx5 LINE L1 6857 7002 -48 5 778 665 259 6 30 chr15 25364411 25364578 -78130396 + RSINE1 SINE B4 3 165 0 5 778 508 296 6 12 chr15 25364578 25364749 -78130225 + L1MA6 LINE L1 5769 5938 -362 5 778 855 280 30 0 chr15 25364850 25365050 -78129924 - B3 SINE B2 -10 206 1 5 778 247 304 88 12 chr15 25365110 25365190 -78129784 + Charlie7 DNA MER1_type 635 720 -1892 5 778 673 188 0 25 chr15 25367600 25367848 -78127126 + CT-rich Low_complexity Low_complexity 1 241 0 5 778 486 236 23 61 chr15 25368339 25368470 -78126504 + RSINE1 SINE B4 3 128 -37 5 778 209 146 0 20 chr15 25368498 25368547 -78126427 + CT-rich Low_complexity Low_complexity 1 48 0 5 778 314 324 108 35 chr15 25368661 25368984 -78125990 - MLT1C LTR MaLR -6 461 90 5 778 243 0 0 0 chr15 25369303 25369330 -78125644 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 5 778 23 33 0 0 chr15 25371084 25371114 -78123860 + AT_rich Low_complexity Low_complexity 1 30 0 5 778 910 334 75 6 chr15 25371869 25372218 -78122756 + MLT1C LTR MaLR 91 463 -4 5 778 240 308 11 0 chr15 25372522 25372595 -78122379 + ID2 SINE ID 11 86 -66 5 778 871 144 13 33 chr15 25372780 25372931 -78122043 + B1_Mur4 SINE Alu 2 149 -1 5 778 186 71 0 0 chr15 25373921 25373949 -78121025 + (CCCCCA)n Simple_repeat Simple_repeat 5 32 0 5 778 569 256 12 56 chr15 25374418 25374579 -78120395 + RSINE1 SINE B4 12 165 0 5 778 342 67 0 0 chr15 25374863 25374908 -78120066 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 778 258 32 0 0 chr15 25375852 25375883 -78119091 + (CTCA)n Simple_repeat Simple_repeat 4 34 0 5 778 216 0 0 0 chr15 25376141 25376165 -78118809 + (T)n Simple_repeat Simple_repeat 1 24 0 5 778 778 138 7 14 chr15 25376667 25376814 -78118160 + GA-rich Low_complexity Low_complexity 4 149 0 5 778 198 0 0 0 chr15 25377287 25377309 -78117665 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 778 759 164 18 0 chr15 25377438 25377609 -78117365 + CT-rich Low_complexity Low_complexity 1 174 0 5 778 570 29 0 0 chr15 25378077 25378145 -78116829 + (TC)n Simple_repeat Simple_repeat 2 69 0 5 778 1009 168 31 5 chr15 25378145 25378336 -78116638 + ORR1D1 LTR MaLR 177 372 -2 5 778 333 0 0 0 chr15 25378402 25378439 -78116535 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 778 226 247 114 34 chr15 25379419 25379507 -78115467 + ORR1E-int LTR MaLR 1363 1457 -335 5 778 285 308 24 40 chr15 25380935 25381060 -78113914 - MLT1L LTR MaLR -1 609 487 5 778 342 271 116 20 chr15 25381175 25381322 -78113652 + MIR SINE MIR 96 256 -6 5 778 207 100 0 0 chr15 25381564 25381594 -78113380 + (CTAA)n Simple_repeat Simple_repeat 2 31 0 5 778 1107 96 51 0 chr15 25381594 25381751 -78113223 - B2_Mm2 SINE B2 -30 165 1 5 778 1042 194 8 59 chr15 25381808 25382044 -78112930 - URR1B DNA MER1_type 0 225 2 5 778 944 194 61 52 chr15 25382159 25382371 -78112603 - B3 SINE B2 0 216 3 5 778 239 320 78 31 chr15 25382380 25382509 -78112465 - MER3 DNA MER1_type -54 155 21 5 778 286 352 106 32 chr15 25382532 25382720 -78112254 + ORR1E LTR MaLR 1 202 -157 5 778 295 252 182 0 chr15 25383325 25383424 -78111550 + B1_Mus2 SINE Alu 30 146 -1 5 778 426 298 52 37 chr15 25383594 25383730 -78111244 - MER5A DNA MER1_type -50 139 2 5 778 305 350 158 35 chr15 25383863 25384091 -78110883 - MIR SINE MIR -2 260 5 5 778 401 316 117 63 chr15 25384162 25384368 -78110606 + B4A SINE B4 1 217 -75 5 778 396 0 0 0 chr15 25384437 25384481 -78110493 + (TC)n Simple_repeat Simple_repeat 1 44 0 5 778 33 0 0 0 chr15 25384523 25384556 -78110418 + AT_rich Low_complexity Low_complexity 1 33 0 5 778 468 0 0 0 chr15 25384602 25384654 -78110320 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 5 778 21 0 0 0 chr15 25384855 25384876 -78110098 + AT_rich Low_complexity Low_complexity 1 21 0 5 778 826 234 17 0 chr15 25384904 25385079 -78109895 + B3A SINE B2 5 182 -16 5 778 451 141 22 0 chr15 25385093 25385185 -78109789 + (CA)n Simple_repeat Simple_repeat 1 94 0 5 778 414 360 93 44 chr15 25385459 25385513 -78109461 - L1MC4a LINE L1 -792 7090 7030 5 778 1164 86 0 0 chr15 25385513 25385675 -78109299 + (TTCC)n Simple_repeat Simple_repeat 4 165 0 5 778 414 360 93 44 chr15 25385675 25385995 -78108979 - L1MC4a LINE L1 -853 7029 6695 5 778 297 0 0 0 chr15 25385995 25386028 -78108946 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 778 414 360 93 44 chr15 25386028 25386059 -78108915 - L1MC4a LINE L1 -1188 6694 6665 5 778 2306 178 48 71 chr15 25386090 25386184 -78108790 - RLTR24 LTR ERV1 0 529 429 5 778 181 0 69 0 chr15 25386184 25386213 -78108761 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 778 2306 178 48 71 chr15 25386213 25386655 -78108319 - RLTR24 LTR ERV1 -101 428 7 5 778 709 174 11 27 chr15 25387072 25387255 -78107719 + CT-rich Low_complexity Low_complexity 1 180 0 5 778 186 214 0 97 chr15 25387509 25387571 -78107403 + L3 LINE CR1 2339 2394 -2095 5 778 513 84 0 0 chr15 25387725 25387796 -78107178 + (TC)n Simple_repeat Simple_repeat 2 72 0 5 778 207 0 0 0 chr15 25388189 25388212 -78106762 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 778 324 64 0 0 chr15 25390776 25390823 -78104151 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 5 778 338 261 36 26 chr15 25391536 25391730 -78103244 + B4 SINE B4 3 231 -61 5 778 461 313 94 27 chr15 25391729 25391985 -78102989 + B4A SINE B4 16 288 -4 5 778 216 214 0 0 chr15 25392103 25392145 -78102829 + A-rich Low_complexity Low_complexity 1 42 0 5 778 320 291 94 6 chr15 25392172 25392331 -78102643 + Lx8 LINE L1 7246 7418 -55 5 778 3424 42 0 5 chr15 25392856 25393265 -78101709 + MTB_Mm LTR MaLR 1 407 0 5 778 631 252 13 19 chr15 25394058 25394216 -78100758 - B3 SINE B2 -59 157 1 5 778 460 17 0 0 chr15 25394634 25394694 -78100280 + L1_Mus3 LINE L1 6572 6631 -7 5 778 1620 187 67 9 chr15 25394775 25394936 -78100038 + ORR1D1 LTR MaLR 1 163 -211 5 778 396 0 0 0 chr15 25394936 25394980 -78099994 + (TC)n Simple_repeat Simple_repeat 1 44 0 5 778 1620 187 67 9 chr15 25394980 25395164 -78099810 + ORR1D1 LTR MaLR 164 366 -8 5 778 34 42 0 0 chr15 25395360 25395408 -78099566 + AT_rich Low_complexity Low_complexity 1 48 0 5 778 194 0 39 0 chr15 25395551 25395577 -78099397 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 5 778 337 303 18 27 chr15 25395629 25395741 -78099233 - Lx7 LINE L1 -397 7299 7189 5 778 2007 239 32 20 chr15 25395805 25396246 -78098728 - Lx6 LINE L1 -185 7275 6830 5 778 240 86 0 0 chr15 25396699 25396734 -78098240 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 778 264 122 0 0 chr15 25396913 25396954 -78098020 + (CATA)n Simple_repeat Simple_repeat 2 42 0 5 778 279 133 0 0 chr15 25396993 25397038 -78097936 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 778 683 283 90 38 chr15 25397117 25397445 -78097529 + MLT1B LTR MaLR 1 347 -43 5 778 222 37 0 0 chr15 25397445 25397472 -78097502 + (CCA)n Simple_repeat Simple_repeat 1 27 0 5 778 683 283 90 38 chr15 25397472 25397510 -78097464 + MLT1B LTR MaLR 348 385 -5 5 778 23 54 0 0 chr15 25398022 25398059 -78096915 + AT_rich Low_complexity Low_complexity 1 37 0 5 778 477 0 0 0 chr15 25398223 25398276 -78096698 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 778 195 284 0 56 chr15 25400413 25400484 -78094490 - L2 LINE L2 -669 2750 2684 5 778 517 163 0 32 chr15 25400487 25400582 -78094392 - ORR1C2 LTR MaLR 0 384 293 5 778 531 0 0 0 chr15 25401471 25401530 -78093444 + (TTTTG)n Simple_repeat Simple_repeat 3 61 0 5 778 732 168 45 15 chr15 25401530 25401663 -78093311 - B1_Mur3 SINE Alu -12 137 1 5 778 225 286 58 67 chr15 25402362 25402482 -78092492 + MLT1A0 LTR MaLR 1 119 -246 5 778 791 196 72 90 chr15 25402815 25403129 -78091845 - RLTR20C LTR ERVK -293 275 1 5 778 630 283 53 38 chr15 25403302 25403566 -78091408 + MER2 DNA MER2_type 46 313 -32 6 778 503 245 49 43 chr15 25404108 25404270 -78090704 + B3 SINE B2 1 163 -53 6 778 21 36 0 0 chr15 25404270 25404298 -78090676 + AT_rich Low_complexity Low_complexity 1 28 0 6 778 243 0 0 0 chr15 25405021 25405048 -78089926 + (GA)n Simple_repeat Simple_repeat 1 27 0 6 778 342 67 0 0 chr15 25406061 25406106 -78088868 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 778 247 333 32 0 chr15 25406824 25406947 -78088027 - MLT1A LTR MaLR -3 546 420 6 778 708 178 65 7 chr15 25407013 25407166 -78087808 - ORR1D1 LTR MaLR -212 162 1 6 778 1163 83 0 0 chr15 25407409 25407554 -78087420 + B1_Mm SINE Alu 2 146 -1 6 778 244 254 15 0 chr15 25407572 25407639 -78087335 - MER58B DNA MER1_type -237 104 37 6 778 1505 147 96 63 chr15 25407666 25408001 -78086973 + ORR1B1 LTR MaLR 41 386 -8 6 778 1898 111 15 68 chr15 25409110 25409449 -78085525 + ORR1A4 LTR MaLR 1 321 -8 6 778 451 300 98 85 chr15 25409858 25409994 -78084980 - MLT1A LTR MaLR -17 357 211 6 778 1744 108 17 110 chr15 25409994 25410349 -78084625 + RLTRETN_Mm LTR ERVK 1 322 0 6 778 451 300 98 85 chr15 25410349 25410540 -78084434 - MLT1A LTR MaLR -164 210 26 6 778 456 265 161 60 chr15 25410574 25410892 -78084082 - ORR1E LTR MaLR -14 365 1 6 778 372 118 0 0 chr15 25411766 25411834 -78083140 + (TC)n Simple_repeat Simple_repeat 1 68 0 6 778 429 116 0 0 chr15 25411834 25411903 -78083071 + (TG)n Simple_repeat Simple_repeat 2 70 0 6 778 544 267 76 0 chr15 25411907 25412038 -78082936 - B1_Mur1 SINE Alu -7 142 2 6 778 290 278 20 20 chr15 25412215 25412314 -78082660 + MER58A DNA MER1_type 61 159 -65 6 778 215 155 83 33 chr15 25412686 25412746 -78082228 + A-rich Low_complexity Low_complexity 5 67 0 6 778 354 267 0 18 chr15 25413245 25413409 -78081565 + GA-rich Low_complexity Low_complexity 2 162 0 6 778 1213 154 0 5 chr15 25413413 25413609 -78081365 - Lx LINE L1 -222 6432 6238 6 778 534 254 59 7 chr15 25413770 25413905 -78081069 - RSINE1 SINE B4 -22 143 2 6 778 284 244 8 31 chr15 25413912 25414039 -78080935 - Charlie5 DNA MER1_type -95 2529 2406 6 778 231 341 35 35 chr15 25414670 25414843 -78080131 + L1MD2 LINE L1 6011 6183 -176 6 778 2591 166 10 0 chr15 25414847 25415264 -78079710 - MTC LTR MaLR 0 421 1 6 778 831 21 0 0 chr15 25415679 25415776 -78079198 + (CCCCAG)n Simple_repeat Simple_repeat 6 102 0 6 778 261 296 165 55 chr15 25416699 25416899 -78078075 + ID_B1 SINE B4 1 222 -2 6 778 2686 30 0 0 chr15 25417154 25417492 -78077482 + ORR1A0 LTR MaLR 1 338 -8 6 778 486 108 0 0 chr15 25417586 25417669 -78077305 + (TC)n Simple_repeat Simple_repeat 2 84 0 6 778 416 269 172 18 chr15 25418383 25418546 -78076428 + ID_B1 SINE B4 15 202 -22 6 778 1360 100 21 0 chr15 25419009 25419199 -78075775 - B2_Mm2 SINE B2 0 195 2 6 778 1360 100 15 26 chr15 25421250 25421445 -78073529 + B2_Mm2 SINE B2 3 195 0 6 778 247 218 37 49 chr15 25421528 25421610 -78073364 - L1ME2 LINE L1 -92 6072 5992 6 778 276 111 0 0 chr15 25421856 25421901 -78073073 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 6 778 852 77 0 0 chr15 25422445 25422562 -78072412 + (TCTCCC)n Simple_repeat Simple_repeat 5 121 0 6 778 360 43 0 0 chr15 25423024 25423070 -78071904 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 6 778 261 247 17 157 chr15 25423209 25423324 -78071650 + B3A SINE B2 100 198 0 6 778 648 26 0 0 chr15 25423790 25423868 -78071106 + (TC)n Simple_repeat Simple_repeat 1 78 0 6 778 2135 122 0 15 chr15 25423917 25424249 -78070725 + ORR1A2 LTR MaLR 1 327 0 6 778 339 193 0 0 chr15 25425217 25425300 -78069674 + (TG)n Simple_repeat Simple_repeat 1 83 0 6 778 414 88 0 0 chr15 25425299 25425367 -78069607 + (GA)n Simple_repeat Simple_repeat 1 68 0 6 778 210 159 22 43 chr15 25426410 25426456 -78068518 + CT-rich Low_complexity Low_complexity 3 47 0 6 778 778 262 5 25 chr15 25426470 25426666 -78068308 - B3A SINE B2 -5 193 2 6 778 944 82 0 7 chr15 25426669 25426805 -78068169 + (TTC)n Simple_repeat Simple_repeat 1 135 0 6 779 22 80 0 0 chr15 25430318 25430368 -78064606 + AT_rich Low_complexity Low_complexity 1 50 0 6 779 33 0 0 0 chr15 25430521 25430554 -78064420 + AT_rich Low_complexity Low_complexity 1 33 0 6 779 555 56 0 0 chr15 25430606 25430677 -78064297 + (GA)n Simple_repeat Simple_repeat 2 72 0 6 779 22 80 0 0 chr15 25431229 25431279 -78063695 + AT_rich Low_complexity Low_complexity 1 50 0 6 779 477 34 0 0 chr15 25431641 25431700 -78063274 + (CATA)n Simple_repeat Simple_repeat 1 59 0 6 779 1170 144 10 15 chr15 25432665 25432863 -78062111 + Lx2 LINE L1 6801 6997 0 6 779 720 270 85 9 chr15 25432958 25433182 -78061792 + B4 SINE B4 38 278 -14 6 779 261 0 0 0 chr15 25433453 25433482 -78061492 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 779 222 62 0 0 chr15 25434041 25434073 -78060901 + (GA)n Simple_repeat Simple_repeat 1 32 0 6 779 211 54 26 26 chr15 25434748 25434786 -78060188 + (TCTCC)n Simple_repeat Simple_repeat 3 40 0 6 779 333 308 44 29 chr15 25435127 25435264 -78059710 + B3A SINE B2 42 180 -18 6 779 816 235 6 0 chr15 25435293 25435459 -78059515 + B3 SINE B2 1 167 -49 6 779 419 0 20 0 chr15 25435459 25435510 -78059464 + (CATA)n Simple_repeat Simple_repeat 4 55 0 6 779 923 264 91 30 chr15 25435914 25436253 -78058721 + MTEa LTR MaLR 20 379 0 6 779 433 47 0 0 chr15 25436270 25436334 -78058640 - L1Md_F2 LINE L1 0 6582 6519 6 779 225 326 20 20 chr15 25436761 25436861 -78058113 + MIR SINE MIR 50 149 -113 6 779 547 154 37 0 chr15 25438527 25438663 -78056311 + CT-rich Low_complexity Low_complexity 2 142 0 6 779 611 187 15 7 chr15 25439405 25439540 -78055434 + B3 SINE B2 2 137 -79 6 779 327 49 0 0 chr15 25440156 25440197 -78054777 + (TC)n Simple_repeat Simple_repeat 1 41 0 6 779 356 0 23 0 chr15 25440298 25440342 -78054632 + (GA)n Simple_repeat Simple_repeat 1 45 0 6 779 229 318 27 9 chr15 25440765 25440876 -78054098 + L1_Rod LINE L1 2131 2243 -3604 6 779 258 279 21 41 chr15 25440861 25441055 -78053919 + L1M2c LINE L1 1840 2029 -4760 6 779 337 308 22 11 chr15 25441174 25441358 -78053616 + L1M2c LINE L1 2886 3071 -3714 6 779 2776 119 117 2 chr15 25441361 25442124 -78052850 - RMER17B LTR ERVK -69 889 1 6 779 364 262 49 21 chr15 25442126 25442270 -78052704 + L1M2c LINE L1 3079 3226 -3559 6 779 269 318 0 0 chr15 25442289 25442355 -78052619 + Lx8 LINE L1 7119 7184 -289 6 779 414 0 0 0 chr15 25442549 25442595 -78052379 + (TAAAA)n Simple_repeat Simple_repeat 3 48 0 6 779 611 278 112 30 chr15 25442595 25443120 -78051854 + L1M2c LINE L1 3737 4306 -2479 6 779 538 299 6 43 chr15 25443121 25443282 -78051692 + RSINE1 SINE B4 11 165 0 6 779 1567 285 107 29 chr15 25443285 25444170 -78050804 + L1M2c LINE L1 4331 5284 -1501 6 779 296 244 48 24 chr15 25444595 25444679 -78050295 + MTEb LTR MaLR 294 379 0 6 779 201 74 0 0 chr15 25445480 25445507 -78049467 + (A)n Simple_repeat Simple_repeat 1 27 0 6 779 294 224 12 2 chr15 25445525 25445613 -78049361 + MIRc SINE MIR 38 130 -146 6 779 3052 247 45 41 chr15 25445631 25446325 -78048649 - ORR1C1-int LTR MaLR -391 979 294 6 779 939 102 0 0 chr15 25446325 25446462 -78048512 + (TTCTCC)n Simple_repeat Simple_repeat 3 139 0 6 779 3052 247 45 41 chr15 25446462 25446742 -78048232 - ORR1C1-int LTR MaLR -1077 293 1 6 779 1318 167 192 3 chr15 25446748 25447055 -78047919 - ORR1C1 LTR MaLR -10 368 4 6 779 1073 214 12 16 chr15 25447486 25447738 -78047236 + ORR1C1 LTR MaLR 1 251 -127 6 779 1319 249 48 14 chr15 25449331 25449685 -78045289 + Lx6 LINE L1 7069 7434 -26 6 779 607 310 27 40 chr15 25449923 25450148 -78044826 + ORR1E LTR MaLR 1 222 -137 6 779 1214 61 0 0 chr15 25450354 25450502 -78044472 + B1_Mus1 SINE Alu 1 148 0 6 779 419 225 8 0 chr15 25450502 25450615 -78044359 + GA-rich Low_complexity Low_complexity 7 120 0 6 779 3734 36 0 2 chr15 25450615 25451055 -78043919 + L1Md_T LINE L1 6143 6581 -1 6 779 558 0 0 0 chr15 25451055 25451117 -78043857 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 6 779 425 284 155 16 chr15 25451731 25451965 -78043009 - MLT1C LTR MaLR -71 319 53 6 779 975 167 92 12 chr15 25452061 25452310 -78042664 + RMER17C LTR ERVK 142 410 0 6 779 606 290 26 32 chr15 25453183 25453372 -78041602 - B3A SINE B2 -6 192 5 6 779 273 301 18 72 chr15 25453836 25453947 -78041027 + PB1D10 SINE Alu 12 116 -1 6 779 246 62 0 0 chr15 25453948 25453980 -78040994 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 779 315 194 21 11 chr15 25454789 25454883 -78040091 + GA-rich Low_complexity Low_complexity 2 96 0 6 779 21 57 0 0 chr15 25455936 25455971 -78039003 + AT_rich Low_complexity Low_complexity 1 35 0 6 779 2851 36 145 0 chr15 25456563 25456922 -78038052 - IAPLTR2a LTR ERVK 0 411 1 6 779 456 209 18 178 chr15 25457170 25457333 -78037641 + B1F SINE Alu 14 149 0 6 779 485 298 98 60 chr15 25457512 25457830 -78037144 + ORR1E LTR MaLR 25 354 -5 6 779 369 0 0 0 chr15 25457983 25458024 -78036950 + (GA)n Simple_repeat Simple_repeat 1 41 0 6 779 567 107 0 0 chr15 25458071 25458155 -78036819 + (GGAA)n Simple_repeat Simple_repeat 4 87 0 6 779 198 0 0 0 chr15 25458359 25458381 -78036593 + (TC)n Simple_repeat Simple_repeat 2 23 0 6 779 351 0 0 0 chr15 25458381 25458419 -78036555 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 779 690 269 0 7 chr15 25458435 25458581 -78036393 - B3A SINE B2 -52 146 2 6 779 445 277 81 50 chr15 25458582 25458780 -78036194 + MTE-int LTR MaLR 414 617 -963 6 779 5926 160 26 6 chr15 25458806 25459943 -78035031 - Lx4B LINE L1 -397 6661 5487 6 779 330 291 67 113 chr15 25460043 25460326 -78034648 + ORR1E LTR MaLR 88 357 -2 6 779 842 218 119 5 chr15 25460430 25460624 -78034350 - B3 SINE B2 0 216 1 6 779 250 234 38 38 chr15 25461488 25461568 -78033406 - B4A SINE B4 -21 271 192 7 779 277 329 85 24 chr15 25461959 25462124 -78032850 + L1M3 LINE L1 5689 5863 -320 7 779 2500 78 19 0 chr15 25462275 25462595 -78032379 - ORR1A2 LTR MaLR 0 327 2 7 779 705 136 8 0 chr15 25462816 25462934 -78032040 + MTC LTR MaLR 169 287 -134 7 779 2557 52 0 0 chr15 25463357 25463667 -78031307 - L1_Mus3 LINE L1 -109 6529 6220 7 779 3140 75 20 2 chr15 25463847 25464247 -78030727 - MTB_Mm LTR MaLR 0 407 1 7 779 4273 144 76 20 chr15 25464387 25465319 -78029655 + RMER17B LTR ERVK 5 958 0 7 779 465 205 83 13 chr15 25465465 25465596 -78029378 - PB1D7 SINE Alu 0 149 10 7 779 284 290 119 10 chr15 25465836 25466038 -78028936 + L1ME3B LINE L1 5670 5893 -347 7 779 24 0 0 0 chr15 25467309 25467333 -78027641 + AT_rich Low_complexity Low_complexity 1 24 0 7 779 525 238 0 0 chr15 25468001 25468165 -78026809 + (CA)n Simple_repeat Simple_repeat 2 165 0 7 779 522 215 0 33 chr15 25468184 25468367 -78026607 + (CATA)n Simple_repeat Simple_repeat 4 180 0 7 779 217 225 0 0 chr15 25468368 25468408 -78026566 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 779 261 0 0 0 chr15 25468438 25468467 -78026507 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 7 779 1110 85 0 21 chr15 25468467 25468604 -78026370 - B1_Mus1 SINE Alu -13 135 1 7 779 1096 211 14 0 chr15 25470002 25470210 -78024764 - B3 SINE B2 -3 213 3 7 779 441 178 0 0 chr15 25470349 25470370 -78024604 + (TA)n Simple_repeat Simple_repeat 1 21 0 7 779 423 0 0 0 chr15 25470370 25470417 -78024557 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 779 441 178 0 0 chr15 25470417 25470496 -78024478 + (TA)n Simple_repeat Simple_repeat 2 80 0 7 779 544 241 97 34 chr15 25470912 25471088 -78023886 + B3A SINE B2 6 192 -6 7 779 288 130 0 0 chr15 25471246 25471292 -78023682 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 779 961 251 88 18 chr15 25472626 25472898 -78022076 + B4A SINE B4 2 292 0 7 779 227 259 0 0 chr15 25472900 25472958 -78022016 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 779 907 39 19 19 chr15 25474123 25474281 -78020693 - RMER17B LTR ERVK -495 463 306 7 779 791 241 35 30 chr15 25474322 25474350 -78020624 - B3A SINE B2 0 198 169 7 779 387 0 0 0 chr15 25474350 25474393 -78020581 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 779 369 0 0 0 chr15 25474393 25474433 -78020541 + (GA)n Simple_repeat Simple_repeat 1 41 0 7 779 791 241 35 30 chr15 25474433 25474600 -78020374 - B3A SINE B2 -30 168 2 7 779 316 268 0 58 chr15 25474827 25474914 -78020060 - ID4_ SINE ID 0 83 2 7 779 1472 39 62 0 chr15 25475071 25475250 -78019724 + B2_Mm1t SINE B2 1 190 -3 7 779 1217 257 20 26 chr15 25475323 25475666 -78019308 - ORR1D2 LTR MaLR -5 365 25 7 779 598 207 28 35 chr15 25476358 25476503 -78018471 + B1F2 SINE Alu 4 147 -2 7 779 22 70 0 0 chr15 25476503 25476546 -78018428 + AT_rich Low_complexity Low_complexity 1 43 0 7 779 23 33 0 0 chr15 25476574 25476604 -78018370 + AT_rich Low_complexity Low_complexity 1 30 0 7 779 894 200 6 11 chr15 25476909 25477091 -78017883 + B3A SINE B2 1 181 -17 7 779 203 133 0 0 chr15 25477093 25477123 -78017851 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 779 608 180 11 43 chr15 25477130 25477316 -78017658 + (CATA)n Simple_repeat Simple_repeat 1 180 0 7 779 22 56 0 0 chr15 25477343 25477379 -78017595 + AT_rich Low_complexity Low_complexity 1 36 0 7 779 960 75 0 0 chr15 25477639 25477773 -78017201 + (TTC)n Simple_repeat Simple_repeat 2 135 0 7 779 2996 153 25 6 chr15 25478355 25478869 -78016105 + RLTR28 LTR ERVL 1 524 0 7 779 324 70 0 0 chr15 25479133 25479176 -78015798 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 779 664 273 0 60 chr15 25479181 25479364 -78015610 - B3A SINE B2 -26 172 1 7 779 263 263 52 10 chr15 25479458 25479554 -78015420 - MER63B DNA AcHobo -50 386 287 7 779 290 288 0 0 chr15 25480126 25480199 -78014775 - MER5A DNA MER1_type -115 74 2 7 779 501 17 0 0 chr15 25480808 25480866 -78014108 + (GGAA)n Simple_repeat Simple_repeat 4 61 0 7 779 908 142 13 6 chr15 25480881 25481200 -78013774 + GA-rich Low_complexity Low_complexity 1 321 0 7 779 1267 67 6 6 chr15 25481200 25481380 -78013594 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 7 779 284 256 0 60 chr15 25482722 25482805 -78012169 - MLT1A1 LTR MaLR -308 100 23 7 779 215 278 61 10 chr15 25483665 25483763 -78011211 + MIR SINE MIR 13 115 -147 7 779 438 274 161 92 chr15 25484385 25484904 -78010070 + RMER20B LTR ERVK 29 596 -31 7 779 228 135 0 0 chr15 25485056 25485093 -78009881 + (ATG)n Simple_repeat Simple_repeat 1 37 0 7 779 227 303 26 0 chr15 25485115 25485191 -78009783 + B4A SINE B4 3 80 -212 7 779 484 296 55 30 chr15 25485190 25485354 -78009620 + B3 SINE B2 49 216 0 7 779 239 274 16 16 chr15 25485404 25485467 -78009507 - L1M1 LINE L1 -414 5889 5827 7 779 202 283 0 0 chr15 25485487 25485540 -78009434 + (TATG)n Simple_repeat Simple_repeat 4 56 0 7 779 215 292 0 58 chr15 25486233 25486302 -78008672 - MIR SINE MIR -91 171 107 7 779 213 39 0 0 chr15 25486965 25486991 -78007983 + (TTA)n Simple_repeat Simple_repeat 2 27 0 7 779 219 146 0 0 chr15 25487020 25487061 -78007913 + (TTTTTG)n Simple_repeat Simple_repeat 1 41 0 7 779 837 141 49 0 chr15 25487062 25487204 -78007770 - B1_Mur3 SINE Alu 0 149 1 7 779 267 103 0 0 chr15 25487219 25487258 -78007716 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 7 779 306 245 30 50 chr15 25487930 25488029 -78006945 - ORR1E LTR MaLR -239 120 24 7 779 880 254 91 20 chr15 25488837 25489171 -78005803 - MTD LTR MaLR -6 353 1 7 779 357 95 0 16 chr15 25489841 25489905 -78005069 + L1Md_F2 LINE L1 6520 6582 0 7 779 35 24 0 0 chr15 25490043 25490085 -78004889 + AT_rich Low_complexity Low_complexity 1 42 0 7 779 723 111 0 27 chr15 25490147 25490258 -78004716 - B1_Mur1 SINE Alu -1 148 41 7 779 442 262 0 27 chr15 25490274 25490384 -78004590 - PB1D10 SINE Alu -1 116 10 7 779 250 314 35 11 chr15 25490307 25490394 -78004580 - B4A SINE B4 -119 173 85 7 779 586 295 10 1 chr15 25491690 25491933 -78003041 + Lx8 LINE L1 5643 5920 -1553 7 779 610 252 0 39 chr15 25493843 25493996 -78000978 + B1F SINE Alu 1 147 -2 7 779 417 116 0 0 chr15 25494216 25494285 -78000689 + (TATG)n Simple_repeat Simple_repeat 4 72 0 7 779 384 22 0 0 chr15 25494356 25494401 -78000573 + (TA)n Simple_repeat Simple_repeat 1 45 0 7 779 269 339 78 53 chr15 25496153 25496589 -77998385 + Tigger13a DNA MER2_type 173 619 -152 7 779 517 139 15 15 chr15 25496772 25496903 -77998071 + (TCTCTG)n Simple_repeat Simple_repeat 2 132 0 7 779 459 0 0 0 chr15 25496903 25496954 -77998020 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 779 180 0 0 0 chr15 25497768 25497788 -77997186 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 7 779 199 0 65 0 chr15 25497936 25497967 -77997007 + (CCCCCA)n Simple_repeat Simple_repeat 1 33 0 7 779 656 163 289 0 chr15 25498816 25498982 -77995992 + B3 SINE B2 2 215 -1 7 779 24 0 0 0 chr15 25499757 25499781 -77995193 + AT_rich Low_complexity Low_complexity 1 24 0 7 779 569 265 24 18 chr15 25500066 25500231 -77994743 - B3 SINE B2 -50 166 1 1 779 2247 148 40 13 chr15 25500264 25500660 -77994314 + MTB_Mm LTR MaLR 1 407 0 2 779 729 239 150 72 chr15 25500781 25500896 -77994078 - MTE2a LTR MaLR -4 375 241 3 779 435 19 0 0 chr15 25500896 25500948 -77994026 + (GA)n Simple_repeat Simple_repeat 2 53 0 4 779 729 239 150 72 chr15 25500948 25501179 -77993795 - MTE2a LTR MaLR -139 240 3 3 779 1098 50 214 0 chr15 25501250 25501269 -77993705 - B2_Mm1t SINE B2 0 193 162 5 779 180 0 0 0 chr15 25501269 25501289 -77993685 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 6 779 1098 50 214 0 chr15 25501289 25501428 -77993546 - B2_Mm1t SINE B2 -32 161 2 5 779 407 285 74 13 chr15 25501443 25501674 -77993300 + L1MC3 LINE L1 6808 7052 -943 7 779 219 114 0 0 chr15 25501680 25501715 -77993259 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 8 779 1202 244 65 120 chr15 25501717 25502085 -77992889 + ORR1E LTR MaLR 10 357 -2 9 779 435 149 0 0 chr15 25502101 25502175 -77992799 + (GGGA)n Simple_repeat Simple_repeat 3 76 0 1 779 839 263 126 126 chr15 25502175 25502780 -77992194 + L1MC3 LINE L1 7088 7692 -93 7 779 279 197 47 47 chr15 25502830 25502894 -77992080 + AluG_3 SINE Alu 163 226 -85 1 779 494 241 59 74 chr15 25503026 25503228 -77991746 + LTR52 LTR ERVL 1 199 -222 1 779 523 294 159 22 chr15 25503425 25503745 -77991229 + MLT1A0 LTR MaLR 1 364 -1 1 779 366 156 0 0 chr15 25505109 25505173 -77989801 + (TG)n Simple_repeat Simple_repeat 2 65 0 1 779 1141 191 226 19 chr15 25505798 25506108 -77988866 + ORR1D1 LTR MaLR 1 374 0 1 779 603 200 8 34 chr15 25506186 25506305 -77988669 + ID_B1 SINE B4 109 224 0 1 779 223 171 24 0 chr15 25506305 25506346 -77988628 + GA-rich Low_complexity Low_complexity 3 44 0 1 779 375 250 38 0 chr15 25506496 25506576 -77988398 - ID4_ SINE ID 0 83 1 1 779 313 297 172 0 chr15 25506584 25506712 -77988262 + L1MC5 LINE L1 7326 7475 -486 1 779 234 255 118 39 chr15 25508598 25508700 -77986274 + MT2B2 LTR ERVL 99 208 -376 2 779 439 230 8 147 chr15 25508658 25508856 -77986118 + B1_Mm SINE Alu 1 149 0 2 779 405 247 13 64 chr15 25509550 25509683 -77985291 - PB1D9 SINE Alu -1 119 1 2 779 468 0 0 0 chr15 25510723 25510775 -77984199 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 779 415 189 11 53 chr15 25511433 25511528 -77983446 - B1F2 SINE Alu -1 148 58 2 779 264 130 0 0 chr15 25511535 25511581 -77983393 + (T)n Simple_repeat Simple_repeat 1 46 0 2 779 243 0 0 0 chr15 25511606 25511633 -77983341 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 779 33 0 0 0 chr15 25512084 25512117 -77982857 + AT_rich Low_complexity Low_complexity 1 33 0 2 779 1442 216 18 26 chr15 25513049 25513392 -77981582 - RLTR15 LTR ERVK -19 340 1 2 779 27 0 0 0 chr15 25513512 25513539 -77981435 + AT_rich Low_complexity Low_complexity 1 27 0 2 779 194 75 74 19 chr15 25513630 25513684 -77981290 + T-rich Low_complexity Low_complexity 2 58 0 3 779 391 230 109 10 chr15 25513687 25513788 -77981186 - PB1D9 SINE Alu -1 119 9 3 779 238 279 14 14 chr15 25514175 25514244 -77980730 + B3 SINE B2 2 70 -146 3 779 234 62 0 0 chr15 25514252 25514284 -77980690 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 779 25 0 0 0 chr15 25514315 25514340 -77980634 + AT_rich Low_complexity Low_complexity 1 25 0 3 779 323 333 70 19 chr15 25514444 25514600 -77980374 + RSINE1 SINE B4 2 165 0 3 779 1005 67 0 0 chr15 25515672 25515806 -77979168 + (TCTCCC)n Simple_repeat Simple_repeat 3 136 0 3 779 273 288 0 0 chr15 25515843 25515902 -77979072 - ID4 SINE ID -23 60 2 3 779 667 20 50 0 chr15 25517086 25517187 -77977787 + (TC)n Simple_repeat Simple_repeat 1 106 0 3 779 240 35 0 0 chr15 25517188 25517217 -77977757 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 779 710 286 65 46 chr15 25517280 25517540 -77977434 - B4A SINE B4 -22 270 6 4 779 263 230 38 63 chr15 25518143 25518222 -77976752 + MER5A1 DNA MER1_type 38 114 -52 4 779 414 0 0 0 chr15 25518460 25518506 -77976468 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 779 1450 225 54 78 chr15 25518705 25518853 -77976121 - MTD LTR MaLR -5 414 253 4 779 981 181 105 29 chr15 25518853 25519063 -77975911 - URR1A DNA MER1_type 0 226 1 4 779 1450 225 54 78 chr15 25519063 25519079 -77975895 - MTD LTR MaLR -167 252 239 4 779 279 0 0 0 chr15 25519079 25519110 -77975864 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 779 1450 225 54 78 chr15 25519110 25519368 -77975606 - MTD LTR MaLR -181 238 1 4 779 345 314 37 19 chr15 25519415 25519522 -77975452 - B1F1 SINE Alu -2 118 10 4 779 618 14 0 0 chr15 25520988 25521059 -77973915 + (TG)n Simple_repeat Simple_repeat 1 71 0 4 779 615 21 64 0 chr15 25521061 25521155 -77973819 + (CAGAGA)n Simple_repeat Simple_repeat 2 101 0 4 779 227 103 26 0 chr15 25521595 25521634 -77973340 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 779 789 282 15 62 chr15 25521634 25521931 -77973043 - B4A SINE B4 -18 274 30 5 779 207 0 0 0 chr15 25522388 25522411 -77972563 + (T)n Simple_repeat Simple_repeat 1 23 0 5 779 274 245 118 0 chr15 25522546 25522648 -77972326 - BC1_Mm scRNA scRNA -36 116 3 5 779 209 287 45 0 chr15 25522966 25523032 -77971942 + MIR SINE MIR 196 260 -2 5 779 495 0 0 0 chr15 25523111 25523166 -77971808 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 779 505 251 155 6 chr15 25523553 25523721 -77971253 - ORR1D1 LTR MaLR -24 350 158 5 779 580 241 17 0 chr15 25523722 25523838 -77971136 + B1_Mur2 SINE Alu 3 120 -29 5 779 3420 111 189 5 chr15 25523845 25524415 -77970559 - RLTR33 LTR ERVK -3 675 1 5 779 381 310 22 44 chr15 25524415 25524426 -77970548 + ID_B1 SINE B4 205 215 -9 5 779 513 262 117 18 chr15 25524600 25524622 -77970352 - ORR1D1 LTR MaLR -182 188 166 5 779 979 122 12 0 chr15 25524622 25524794 -77970180 + (GGGAGA)n Simple_repeat Simple_repeat 6 179 0 5 779 679 197 31 4 chr15 25524794 25524942 -77970032 - ORR1D1 LTR MaLR -205 165 1 5 779 396 263 10 20 chr15 25525307 25525408 -77969566 + PB1D10 SINE Alu 5 104 -13 6 779 279 202 0 0 chr15 25527006 25527085 -77967889 + T-rich Low_complexity Low_complexity 1 79 0 6 779 1036 116 7 0 chr15 25527088 25527235 -77967739 - B1_Mus1 SINE Alu 0 148 1 6 779 309 230 0 0 chr15 25527368 25527442 -77967532 + (TA)n Simple_repeat Simple_repeat 1 74 0 6 779 240 35 0 0 chr15 25527469 25527498 -77967476 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 6 779 807 80 0 17 chr15 25527514 25527629 -77967345 - B1_Mm SINE Alu -9 138 26 6 779 224 234 154 46 chr15 25528154 25528284 -77966690 - L3 LINE CR1 -50 4439 4296 6 779 997 230 58 10 chr15 25528488 25528694 -77966280 - B3 SINE B2 0 216 1 6 779 255 103 0 0 chr15 25528710 25528749 -77966225 + (CTG)n Simple_repeat Simple_repeat 3 41 0 6 779 310 278 93 0 chr15 25528761 25528858 -77966116 - MLT1D LTR MaLR -37 468 363 6 779 344 333 16 16 chr15 25529469 25529591 -77965383 + MLT1I LTR MaLR 246 367 -44 7 779 3426 35 2 0 chr15 25529769 25530164 -77964810 + MTA_Mm LTR MaLR 1 396 0 7 779 1712 73 4 21 chr15 25530181 25530418 -77964556 - MTB LTR MaLR -167 233 1 7 779 689 287 39 23 chr15 25530483 25530680 -77964294 + B3A SINE B2 3 187 -8 7 779 192 40 0 0 chr15 25530942 25530967 -77964007 + (CTACT)n Simple_repeat Simple_repeat 3 27 0 7 779 560 267 15 147 chr15 25531245 25531579 -77963395 + B4A SINE B4 1 290 -2 7 779 270 0 0 0 chr15 25531640 25531670 -77963304 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 779 206 289 222 10 chr15 25531785 25531988 -77962986 + MIR SINE MIR 6 251 -11 7 779 762 138 17 0 chr15 25532801 25532975 -77961999 + CT-rich Low_complexity Low_complexity 1 177 0 7 779 369 198 0 0 chr15 25532966 25533047 -77961927 + C-rich Low_complexity Low_complexity 6 86 0 7 779 1173 305 124 149 chr15 25533287 25533686 -77961288 - MER45B DNA Tip100 0 1040 634 8 779 637 186 21 28 chr15 25533686 25533830 -77961144 - B1_Mur2 SINE Alu -2 147 5 8 779 1173 305 124 149 chr15 25533830 25534014 -77960960 - MER45B DNA Tip100 -407 633 523 8 779 604 162 317 6 chr15 25534014 25534048 -77960926 - B3 SINE B2 -1 215 183 8 779 447 52 0 0 chr15 25534048 25534106 -77960868 + (TG)n Simple_repeat Simple_repeat 1 58 0 8 779 604 162 317 6 chr15 25534106 25534232 -77960742 - B3 SINE B2 -34 182 7 8 779 1173 305 124 149 chr15 25534232 25534714 -77960260 - MER45B DNA Tip100 -518 522 1 8 779 897 227 6 22 chr15 25535698 25535713 -77959261 + MTD LTR MaLR 1 15 -404 8 779 265 0 75 0 chr15 25535713 25535753 -77959221 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 8 779 897 263 109 52 chr15 25535753 25536092 -77958882 + MTD LTR MaLR 16 400 -7 8 779 455 313 73 26 chr15 25536094 25536327 -77958647 - Arthur1 DNA Tip100 -273 3674 3431 8 779 219 355 16 40 chr15 25537759 25537885 -77957089 - L2a LINE L2 -38 3388 3266 8 779 310 296 0 12 chr15 25539443 25539525 -77955449 - ID SINE ID -143 81 1 8 779 583 254 18 114 chr15 25539548 25539597 -77955377 - ID_B1 SINE B4 -18 206 167 8 779 833 221 39 14 chr15 25539597 25539804 -77955170 - B3 SINE B2 -4 212 1 9 779 583 254 18 114 chr15 25539804 25539981 -77954993 - ID_B1 SINE B4 -58 166 2 8 779 810 298 68 22 chr15 25540149 25540472 -77954502 + MER63D DNA AcHobo 44 381 -680 9 779 473 272 83 73 chr15 25541141 25541359 -77953615 - MLT1B LTR MaLR -7 383 164 9 779 685 168 118 0 chr15 25541359 25541478 -77953496 + B1F2 SINE Alu 1 133 -16 9 779 341 75 0 19 chr15 25541494 25541548 -77953426 + (TC)n Simple_repeat Simple_repeat 1 53 0 9 779 22 0 0 0 chr15 25541683 25541705 -77953269 + AT_rich Low_complexity Low_complexity 1 22 0 9 779 210 91 0 0 chr15 25541991 25542024 -77952950 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 9 779 574 167 187 3 chr15 25542433 25542561 -77952413 + B1_Mur1 SINE Alu 1 149 0 9 779 241 360 0 0 chr15 25542660 25542746 -77952228 + L1MB5 LINE L1 6041 6126 -48 9 779 279 307 55 30 chr15 25543007 25543167 -77951807 - ID_B1 SINE B4 -16 208 1 9 779 267 273 79 20 chr15 25543306 25543407 -77951567 + MTEa LTR MaLR 273 379 0 1 779 207 0 0 0 chr15 25543438 25543461 -77951513 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1 779 2293 15 0 0 chr15 25543550 25543819 -77951155 + MT-int LTR MaLR 756 1024 -74 1 779 229 129 0 0 chr15 25543833 25543864 -77951110 + B1_Mus2 SINE Alu 1 31 -116 1 779 592 48 24 0 chr15 25543864 25543948 -77951026 + (GA)n Simple_repeat Simple_repeat 1 86 0 1 779 279 0 0 0 chr15 25545320 25545351 -77949623 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 779 552 256 8 0 chr15 25545956 25546073 -77948901 - ID_B1 SINE B4 -12 212 95 1 779 306 224 17 0 chr15 25546071 25546129 -77948845 - ORR1D2 LTR MaLR -286 84 26 1 779 913 266 138 0 chr15 25546125 25546400 -77948574 + ORR1D2 LTR MaLR 17 329 -41 1 779 3564 145 35 35 chr15 25546400 25547030 -77947944 + Lx LINE L1 6014 6643 -11 1 779 558 67 0 0 chr15 25547030 25547105 -77947869 + (GAA)n Simple_repeat Simple_repeat 2 76 0 1 779 286 134 106 35 chr15 25547105 25547126 -77947848 + ORR1D2 LTR MaLR 334 356 -18 1 779 324 362 0 11 chr15 25547118 25547213 -77947761 - ID_B1 SINE B4 -126 98 5 1 779 422 143 13 25 chr15 25547653 25547732 -77947242 + B3 SINE B2 139 216 0 1 779 1451 51 0 84 chr15 25548222 25548435 -77946539 - B2_Mm2 SINE B2 0 195 1 1 779 1017 156 21 31 chr15 25549184 25549376 -77945598 - B2_Mm2 SINE B2 -5 190 1 1 779 415 323 94 8 chr15 25549509 25549637 -77945337 + B1_Mus2 SINE Alu 3 141 -6 1 779 462 234 244 25 chr15 25549674 25549990 -77944984 + Charlie1 DNA MER1_type 2244 2628 -153 1 779 533 242 229 6 chr15 25550133 25550312 -77944662 + ID_B1 SINE B4 4 222 -2 1 779 306 338 122 0 chr15 25550337 25550476 -77944498 - L1MC2 LINE L1 -20 6324 6169 1 779 225 0 0 0 chr15 25551036 25551061 -77943913 + (A)n Simple_repeat Simple_repeat 1 25 0 1 779 188 135 27 0 chr15 25551690 25551727 -77943247 + L3 LINE CR1 2358 2395 -2094 1 779 522 139 0 0 chr15 25554505 25554591 -77940383 + (CATATA)n Simple_repeat Simple_repeat 2 87 0 1 779 399 359 43 0 chr15 25555106 25555290 -77939684 - MER20 DNA MER1_type -19 200 9 1 779 261 0 0 0 chr15 25555680 25555709 -77939265 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 779 444 67 0 0 chr15 25555709 25555769 -77939205 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 779 610 158 31 10 chr15 25556227 25556517 -77938457 + (CA)n Simple_repeat Simple_repeat 1 296 0 1 779 822 157 13 64 chr15 25557706 25557727 -77937247 - B1_Mur4 SINE Alu 0 150 138 1 779 237 33 0 0 chr15 25557727 25557757 -77937217 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1 779 822 157 13 64 chr15 25557757 25557892 -77937082 - B1_Mur4 SINE Alu -13 137 2 1 779 998 350 82 34 chr15 25557915 25558660 -77936314 - Lx8 LINE L1 -63 7410 6630 1 779 893 261 16 0 chr15 25558661 25558849 -77936125 + B3 SINE B2 2 192 -24 1 779 198 0 0 0 chr15 25558849 25558871 -77936103 + (TC)n Simple_repeat Simple_repeat 2 23 0 1 779 972 141 0 0 chr15 25558871 25559033 -77935941 + (TA)n Simple_repeat Simple_repeat 2 164 0 1 780 1106 272 76 32 chr15 25559046 25559415 -77935559 - Lx8 LINE L1 -830 6643 6259 1 780 509 233 137 41 chr15 25559630 25559827 -77935147 - B3 SINE B2 0 216 1 1 780 654 273 40 0 chr15 25559857 25560007 -77934967 - RSINE1 SINE B4 -7 158 3 1 780 466 292 78 86 chr15 25560007 25560339 -77934635 - Zaphod DNA Tip100 -941 3090 2762 1 780 258 192 0 0 chr15 25561043 25561095 -77933879 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 780 367 277 124 33 chr15 25561548 25561701 -77933273 - MER20 DNA MER1_type 0 219 53 1 780 263 280 26 13 chr15 25562317 25562393 -77932581 + ID4_ SINE ID 4 80 -3 1 780 538 194 0 114 chr15 25562808 25562948 -77932026 - ID_B1 SINE B4 -8 216 93 1 780 28 48 0 0 chr15 25563222 25563264 -77931710 + AT_rich Low_complexity Low_complexity 1 42 0 1 780 314 253 71 40 chr15 25563332 25563431 -77931543 - RSINE1 SINE B4 -61 104 3 1 780 182 150 25 0 chr15 25564273 25564313 -77930661 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 780 1741 169 145 0 chr15 25564652 25564990 -77929984 - MTC LTR MaLR -34 387 1 1 780 354 45 0 0 chr15 25564990 25565034 -77929940 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 780 265 310 105 9 chr15 25565613 25565727 -77929247 - ID_B1 SINE B4 -16 208 84 1 780 387 248 225 40 chr15 25566172 25566323 -77928651 + B4A SINE B4 11 189 -103 1 780 510 253 25 80 chr15 25566911 25567074 -77927900 + MER20 DNA MER1_type 2 155 -64 1 780 245 207 0 17 chr15 25568015 25568074 -77926900 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 780 866 210 34 0 chr15 25568074 25568250 -77926724 - B3A SINE B2 -16 182 1 1 780 995 273 93 21 chr15 25568353 25568686 -77926288 - ORR1E LTR MaLR -2 357 1 1 780 180 0 0 0 chr15 25568702 25568722 -77926252 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 780 246 301 87 24 chr15 25569312 25569438 -77925536 - MIRb SINE MIR -49 219 86 1 780 561 274 71 44 chr15 25570406 25570589 -77924385 - B3A SINE B2 -9 189 2 1 780 845 211 39 8 chr15 25570630 25570837 -77924137 - B4A SINE B4 -6 286 3 1 780 823 278 16 37 chr15 25571483 25571726 -77923248 - B4A SINE B4 0 292 55 1 780 249 83 0 0 chr15 25572157 25572193 -77922781 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 780 1325 97 32 0 chr15 25573400 25573586 -77921388 - B2_Mm1t SINE B2 0 193 2 1 780 492 99 0 0 chr15 25573789 25573860 -77921114 + (TCCC)n Simple_repeat Simple_repeat 2 72 0 1 780 222 297 87 29 chr15 25573863 25573967 -77921007 - PB1D9 SINE Alu -8 112 3 1 780 429 273 128 39 chr15 25573967 25574037 -77920937 - B4 SINE B4 -207 85 2 1 780 1273 41 0 0 chr15 25574857 25575004 -77919970 + B1_Mus2 SINE Alu 1 147 0 1 780 326 342 97 0 chr15 25576785 25576940 -77918034 + MIR SINE MIR 64 233 -29 1 780 208 255 0 0 chr15 25577062 25577113 -77917861 + L2a LINE L2 3375 3425 -1 1 780 1725 157 82 65 chr15 25577813 25578181 -77916793 - ORR1D1 LTR MaLR 0 374 1 1 780 195 100 0 0 chr15 25578685 25578715 -77916259 + (T)n Simple_repeat Simple_repeat 1 30 0 1 780 977 60 30 0 chr15 25579370 25579504 -77915470 - URR1B DNA MER1_type 0 225 88 1 780 514 208 45 39 chr15 25579504 25579520 -77915454 + CYRA11_Mm Unknown Y-chromosome 172 322 -295 1 780 1091 188 175 31 chr15 25579701 25579992 -77914982 - MTD LTR MaLR 0 419 87 1 780 363 290 22 82 chr15 25579960 25580095 -77914879 - B4 SINE B4 -162 130 4 1 780 442 314 9 44 chr15 25580602 25580868 -77914106 - B4 SINE B4 -27 265 15 1 780 550 304 38 33 chr15 25580938 25581149 -77913825 - B3 SINE B2 0 216 5 1 780 1911 201 30 42 chr15 25582217 25582643 -77912331 + MTC LTR MaLR 1 421 0 1 780 222 62 0 0 chr15 25583789 25583821 -77911153 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 780 519 112 0 0 chr15 25583821 25583901 -77911073 + (TC)n Simple_repeat Simple_repeat 1 80 0 1 780 311 203 0 17 chr15 25583955 25584075 -77910899 + (TCTCTG)n Simple_repeat Simple_repeat 5 122 0 1 780 332 268 30 30 chr15 25584406 25584506 -77910468 - MLT1A1 LTR MaLR -1 407 308 1 780 240 312 122 36 chr15 25584713 25584909 -77910065 + L1MC3 LINE L1 7398 7610 -175 1 780 210 316 49 73 chr15 25585188 25585270 -77909704 - ID4_ SINE ID 0 83 4 1 780 563 195 16 41 chr15 25585315 25585438 -77909536 + PB1D9 SINE Alu 1 120 0 1 780 22 0 0 0 chr15 25585446 25585468 -77909506 + AT_rich Low_complexity Low_complexity 1 22 0 1 780 506 319 25 12 chr15 25585478 25585640 -77909334 - RSINE1 SINE B4 0 165 2 1 780 634 160 20 0 chr15 25586488 25586588 -77908386 + B1_Mus2 SINE Alu 2 103 -44 1 780 289 310 11 11 chr15 25586993 25587081 -77907893 + RSINE1 SINE B4 32 119 -46 1 780 315 0 0 0 chr15 25587232 25587267 -77907707 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 780 1573 290 91 45 chr15 25587279 25588114 -77906860 - Lx7 LINE L1 -423 7273 6401 1 780 317 82 20 0 chr15 25588232 25588281 -77906693 + (TC)n Simple_repeat Simple_repeat 2 51 0 1 780 795 10 50 0 chr15 25588303 25588404 -77906570 - B1_Mus2 SINE Alu 0 147 42 1 780 282 123 0 109 chr15 25588351 25588415 -77906559 - 4.5SRNA scRNA scRNA -3 91 35 1 780 202 242 262 39 chr15 25588489 25588592 -77906382 - L4 LINE RTE -831 1198 1073 1 780 566 209 357 44 chr15 25590046 25590325 -77904649 - ORR1D1 LTR MaLR -4 366 1 1 780 334 263 73 10 chr15 25590328 25590424 -77904550 - ID_B1 SINE B4 -121 103 2 1 780 180 0 0 0 chr15 25591095 25591115 -77903859 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 780 334 333 8 0 chr15 25591270 25591399 -77903575 - L1MB7 LINE L1 -215 5969 5840 1 780 313 262 93 64 chr15 25591427 25591598 -77903376 - L1MB5 LINE L1 -310 5864 5690 1 780 380 209 11 34 chr15 25591723 25591812 -77903162 - MTE2b LTR MaLR -54 325 239 1 780 854 240 6 0 chr15 25591836 25592007 -77902967 - MTE2b LTR MaLR -207 172 1 1 780 339 44 0 0 chr15 25593219 25593264 -77901710 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 780 243 0 0 0 chr15 25593264 25593290 -77901684 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 780 981 254 19 75 chr15 25593301 25593608 -77901366 - B4A SINE B4 -2 290 1 1 780 27 0 0 0 chr15 25593781 25593808 -77901166 + AT_rich Low_complexity Low_complexity 1 27 0 1 780 1167 75 7 0 chr15 25593831 25593977 -77900997 - B1_Mus2 SINE Alu 0 147 1 1 780 1235 93 55 0 chr15 25594372 25594554 -77900420 - L1Md_F2 LINE L1 -9 6573 6382 2 780 437 224 68 17 chr15 25595066 25595184 -77899790 + B3A SINE B2 53 176 -22 2 780 763 221 105 25 chr15 25595875 25596075 -77898899 - B3 SINE B2 0 216 1 2 780 361 344 25 25 chr15 25596550 25596711 -77898263 - RMER30 DNA MER1_type -40 162 2 2 780 741 240 17 17 chr15 25597416 25597594 -77897380 + B3A SINE B2 5 182 -16 2 780 225 94 0 0 chr15 25597743 25597775 -77897199 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 780 230 298 35 35 chr15 25597826 25597913 -77897061 - L1MB1 LINE L1 -228 5940 5854 2 780 623 232 73 77 chr15 25598322 25598569 -77896405 - ORR1D2 LTR MaLR -124 246 1 2 780 504 0 0 0 chr15 25598656 25598712 -77896262 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 780 706 287 31 48 chr15 25600224 25600517 -77894457 - B4 SINE B4 0 292 5 2 780 180 0 0 0 chr15 25600957 25600977 -77893997 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2 780 655 313 68 37 chr15 25601652 25601974 -77893000 + Lx8 LINE L1 7132 7463 -10 2 780 279 217 33 16 chr15 25602289 25602350 -77892624 - PB1 SINE Alu -39 88 27 2 780 205 51 51 0 chr15 25602386 25602425 -77892549 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 780 1333 63 0 6 chr15 25602524 25602699 -77892275 - B2_Mm2 SINE B2 0 195 22 2 780 36 0 0 0 chr15 25602900 25602936 -77892038 + AT_rich Low_complexity Low_complexity 1 36 0 2 780 316 302 68 61 chr15 25604125 25604273 -77890701 + MamRep1161 DNA TcMar 17 165 -792 2 780 718 296 86 39 chr15 25604629 25604991 -77889983 - MTE2b LTR MaLR 0 379 1 2 780 770 231 62 26 chr15 25605168 25605363 -77889611 - B3 SINE B2 -13 203 2 2 780 525 316 128 77 chr15 25605674 25605989 -77888985 + MLT1A LTR MaLR 25 373 -1 2 780 387 306 181 27 chr15 25606421 25606704 -77888270 + MER58B DNA MER1_type 3 339 -2 2 780 807 11 0 0 chr15 25606972 25607064 -77887910 + (TCTCC)n Simple_repeat Simple_repeat 5 96 0 2 780 404 322 98 0 chr15 25607135 25607278 -77887696 + RSINE1 SINE B4 3 159 -6 2 780 231 281 62 69 chr15 25608081 25608211 -77886763 - B1F SINE Alu -8 141 13 2 780 983 254 113 41 chr15 25610384 25610729 -77884245 - ORR1D2 LTR MaLR 0 370 1 2 780 475 338 61 33 chr15 25610808 25611053 -77883921 + B4A SINE B4 39 290 -2 2 780 306 286 26 0 chr15 25612247 25612263 -77882711 + L1MEg LINE L1 1862 1878 -4206 2 780 1234 48 0 0 chr15 25612263 25612409 -77882565 + B1_Mus2 SINE Alu 2 147 0 2 780 306 286 26 0 chr15 25612409 25612469 -77882505 + L1MEg LINE L1 1879 1939 -4145 2 780 180 0 0 0 chr15 25613803 25613823 -77881151 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 2 780 517 237 0 34 chr15 25614050 25614168 -77880806 + PB1D10 SINE Alu 2 115 -2 2 780 222 62 0 0 chr15 25614169 25614201 -77880773 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 2 780 285 29 0 0 chr15 25614314 25614348 -77880626 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 780 611 130 10 29 chr15 25614398 25614501 -77880473 + B1_Mm SINE Alu 47 147 0 2 780 298 283 42 42 chr15 25615459 25615577 -77879397 - Charlie18a DNA MER1_type -128 214 97 2 780 294 73 0 0 chr15 25615827 25615868 -77879106 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 780 521 313 94 35 chr15 25615892 25616147 -77878827 - B4A SINE B4 -17 275 6 2 780 733 225 91 17 chr15 25616374 25616550 -77878424 + B3 SINE B2 1 189 -27 2 780 305 232 35 0 chr15 25616561 25616644 -77878330 + B3A SINE B2 1 89 -127 2 780 237 61 0 0 chr15 25616741 25616753 -77878221 + (T)n Simple_repeat Simple_repeat 1 12 0 2 780 1240 47 0 0 chr15 25616753 25616901 -77878073 - B1_Mus1 SINE Alu 0 148 1 2 780 237 61 0 0 chr15 25616901 25616921 -77878053 + (T)n Simple_repeat Simple_repeat 1 20 0 2 780 949 204 40 30 chr15 25617584 25617786 -77877188 + B3 SINE B2 5 208 -8 2 780 31 26 0 0 chr15 25617787 25617825 -77877149 + AT_rich Low_complexity Low_complexity 1 38 0 2 780 333 47 0 0 chr15 25617894 25617937 -77877037 + (TTA)n Simple_repeat Simple_repeat 2 44 0 2 780 274 312 93 10 chr15 25617945 25618042 -77876932 + PB1D10 SINE Alu 6 110 -7 2 780 332 304 109 17 chr15 25618058 25618232 -77876742 + B4A SINE B4 10 199 -93 2 780 199 349 27 45 chr15 25618651 25618762 -77876212 + L4 LINE RTE 431 539 -1490 2 780 533 258 48 0 chr15 25618786 25618972 -77876002 + B3A SINE B2 3 197 -1 2 780 210 298 35 35 chr15 25619116 25619203 -77875771 + MIR SINE MIR 82 175 -93 2 780 180 213 62 74 chr15 25621375 25621456 -77873518 + L3 LINE CR1 2337 2416 -2073 2 780 778 279 0 11 chr15 25621462 25621636 -77873338 - B3A SINE B2 -26 172 1 2 780 654 185 0 0 chr15 25621671 25621801 -77873173 + CT-rich Low_complexity Low_complexity 4 133 0 2 780 569 227 141 13 chr15 25621926 25622082 -77872892 - L1M4 LINE L1 -448 5730 5555 2 780 320 321 18 36 chr15 25622191 25622301 -77872673 - PB1D10 SINE Alu 0 117 10 2 780 297 235 224 0 chr15 25622970 25623068 -77871906 - B1_Mur2 SINE Alu -29 120 1 2 780 462 258 23 70 chr15 25623614 25623785 -77871189 - B3A SINE B2 -35 163 1 2 780 1624 22 0 11 chr15 25624802 25624988 -77869986 + B2_Mm1a SINE B2 2 185 -8 2 780 302 332 61 51 chr15 25625273 25625568 -77869406 - L1MD1 LINE L1 -5 6237 5940 2 780 390 85 0 0 chr15 25625640 25625699 -77869275 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 780 303 284 79 26 chr15 25626114 25626266 -77868708 + L1MA6 LINE L1 6055 6214 -86 2 780 508 248 94 21 chr15 25626667 25626876 -77868098 - MTD LTR MaLR -164 243 3 2 780 540 269 58 0 chr15 25626879 25627035 -77867939 - HAL1-2a_MD LINE L1 -533 2491 2327 2 780 791 203 22 0 chr15 25627156 25627294 -77867680 + B1_Mur4 SINE Alu 2 142 -8 2 780 458 216 17 51 chr15 25627413 25627530 -77867444 - MER20 DNA MER1_type -82 137 25 2 780 192 179 0 0 chr15 25629514 25629553 -77865421 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 780 1253 41 0 0 chr15 25629637 25629784 -77865190 + B1_Mus2 SINE Alu 1 147 0 2 780 180 0 0 0 chr15 25629948 25629968 -77865006 + (T)n Simple_repeat Simple_repeat 1 20 0 2 780 1212 48 7 0 chr15 25629968 25630114 -77864860 - B1_Mm SINE Alu 0 147 1 2 780 604 258 69 20 chr15 25630623 25630825 -77864149 - B3 SINE B2 -2 214 3 2 780 1655 22 0 0 chr15 25630984 25631168 -77863806 + B2_Mm1a SINE B2 2 185 -8 2 780 1628 46 5 0 chr15 25631822 25632016 -77862958 - B2_Mm2 SINE B2 0 195 1 2 780 180 0 0 0 chr15 25632127 25632147 -77862827 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 780 495 87 0 0 chr15 25632147 25632216 -77862758 + (ATTG)n Simple_repeat Simple_repeat 2 70 0 2 780 532 262 55 65 chr15 25632445 25632645 -77862329 + B3A SINE B2 1 198 0 2 780 201 39 0 0 chr15 25633517 25633543 -77861431 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 2 780 1594 27 27 0 chr15 25633956 25634142 -77860832 - B2_Mm1a SINE B2 -1 192 2 2 780 560 263 44 38 chr15 25634168 25634424 -77860550 - MLT1E2 LTR MaLR -143 484 300 2 780 759 252 88 26 chr15 25634546 25634819 -77860155 + B4A SINE B4 2 291 -1 2 780 279 39 77 0 chr15 25634882 25634934 -77860040 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 2 780 225 65 0 0 chr15 25637658 25637689 -77857285 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 780 309 343 38 0 chr15 25637972 25638077 -77856897 - L1M4b LINE L1 -5064 2270 2162 2 780 2156 110 62 12 chr15 25638665 25639005 -77855969 - ORR1B2 LTR MaLR -10 357 1 2 780 186 118 0 0 chr15 25639121 25639155 -77855819 + (CAAAAA)n Simple_repeat Simple_repeat 1 34 0 2 780 354 289 57 16 chr15 25639326 25639449 -77855525 - RSINE1 SINE B4 -23 142 15 2 780 1302 25 6 12 chr15 25639995 25640154 -77854820 + B2_Mm1a SINE B2 2 160 -33 2 780 450 0 0 0 chr15 25640154 25640204 -77854770 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 2 780 1165 106 0 43 chr15 25640204 25640231 -77854743 + B2_Mm2 SINE B2 160 180 -15 2 780 280 257 14 0 chr15 25640234 25640304 -77854670 - U2 snRNA snRNA -113 75 5 2 780 221 75 0 24 chr15 25641466 25641507 -77853467 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2 780 458 290 121 55 chr15 25641617 25642140 -77852834 - L1MB5 LINE L1 -11 6163 5592 2 780 247 338 68 54 chr15 25642323 25642470 -77852504 + MIR SINE MIR 29 177 -85 2 780 474 317 86 5 chr15 25642597 25642784 -77852190 - MLT1B LTR MaLR -156 234 33 2 780 744 159 57 14 chr15 25643040 25643180 -77851794 + B1_Mus1 SINE Alu 3 148 0 2 780 1216 184 0 71 chr15 25644442 25644682 -77850292 + URR1B DNA MER1_type 2 224 -1 2 780 423 202 19 48 chr15 25646179 25646283 -77848691 - PB1D10 SINE Alu 0 117 17 2 780 926 161 7 13 chr15 25646287 25646438 -77848536 + B1_Mur4 SINE Alu 1 150 0 2 780 323 230 160 38 chr15 25646501 25646632 -77848342 + B1_Mur1 SINE Alu 3 149 0 2 780 253 232 0 28 chr15 25646817 25646888 -77848086 + CT-rich Low_complexity Low_complexity 4 72 0 2 780 30 0 0 0 chr15 25647188 25647218 -77847756 + AT_rich Low_complexity Low_complexity 1 30 0 2 780 378 0 0 0 chr15 25647254 25647296 -77847678 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 780 545 258 57 25 chr15 25647596 25647755 -77847219 - MER57A-int LTR ERV1 -204 5983 5820 3 780 245 49 73 0 chr15 25647755 25647796 -77847178 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 3 780 1675 21 11 0 chr15 25647802 25647993 -77846981 + B2_Mm1a SINE B2 1 193 0 3 780 1304 83 67 0 chr15 25648249 25648429 -77846545 - B2_Mm1t SINE B2 0 193 2 3 780 1045 39 247 0 chr15 25648657 25648811 -77846163 + B2_Mm2 SINE B2 2 193 -2 3 780 249 310 28 0 chr15 25651663 25651734 -77843240 - RSINE1 SINE B4 -15 150 78 3 780 544 214 36 0 chr15 25652207 25652319 -77842655 + B1_Mur1 SINE Alu 22 137 -12 3 780 275 260 0 0 chr15 25652841 25652891 -77842083 + ID4_ SINE ID 4 53 -30 3 780 180 152 0 0 chr15 25652916 25652949 -77842025 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 780 451 279 87 20 chr15 25653052 25653202 -77841772 + MER58B DNA MER1_type 162 321 -20 3 780 763 206 43 0 chr15 25654092 25654233 -77840741 + B1_Mus1 SINE Alu 1 147 -1 3 780 25 31 0 0 chr15 25654903 25654935 -77840039 + AT_rich Low_complexity Low_complexity 1 32 0 3 780 537 250 23 8 chr15 25655416 25655545 -77839429 - B4A SINE B4 -10 282 152 3 780 725 182 0 0 chr15 25655620 25655746 -77839228 - B3 SINE B2 -86 130 5 3 780 288 0 0 0 chr15 25656350 25656382 -77838592 + (T)n Simple_repeat Simple_repeat 1 32 0 3 780 713 255 129 22 chr15 25657039 25657264 -77837710 + MER2 DNA MER2_type 93 341 -4 3 780 468 255 0 0 chr15 25657464 25657558 -77837416 - Lx8 LINE L1 -1059 6414 6321 3 780 581 241 0 0 chr15 25657683 25657791 -77837183 + PB1D7 SINE Alu 12 119 -1 3 780 276 301 119 79 chr15 25658337 25658402 -77836572 + MER2 DNA MER2_type 142 209 -136 3 780 525 289 0 0 chr15 25658402 25658537 -77836437 + B1F SINE Alu 2 136 -13 3 780 276 301 119 79 chr15 25658537 25658648 -77836326 + MER2 DNA MER2_type 210 325 -20 3 780 1223 34 7 0 chr15 25659400 25659546 -77835428 + B1_Mus2 SINE Alu 1 147 0 3 780 243 0 0 0 chr15 25659548 25659575 -77835399 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 3 780 189 25 23 91 chr15 25659933 25659977 -77834997 + (TTTTTG)n Simple_repeat Simple_repeat 6 46 0 3 780 1161 42 35 0 chr15 25659977 25660120 -77834854 - B1_Mus1 SINE Alu 0 148 1 3 780 414 0 0 0 chr15 25660550 25660596 -77834378 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 780 387 264 155 41 chr15 25660707 25660901 -77834073 + ID_B1 SINE B4 2 217 -7 3 780 215 196 0 148 chr15 25662014 25662068 -77832906 - ID4_ SINE ID -9 74 29 3 780 187 93 47 0 chr15 25662375 25662418 -77832556 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 780 194 130 22 0 chr15 25662748 25662771 -77832203 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 3 780 315 0 0 0 chr15 25662771 25662806 -77832168 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 780 194 130 22 0 chr15 25662806 25662828 -77832146 + (TCTCTG)n Simple_repeat Simple_repeat 3 25 0 3 780 377 208 0 0 chr15 25663368 25663440 -77831534 + B3A SINE B2 25 96 -102 3 780 347 351 41 46 chr15 25664091 25664285 -77830689 + MIRb SINE MIR 68 260 -8 3 780 262 305 70 14 chr15 25664404 25664547 -77830427 - RSINE1 SINE B4 -12 153 3 3 780 560 235 88 7 chr15 25664568 25664705 -77830269 - B1_Mur1 SINE Alu 0 149 2 3 780 419 118 159 5 chr15 25664725 25664825 -77830149 - B2_Mm2 SINE B2 -14 181 47 3 780 1238 109 40 0 chr15 25664838 25665012 -77829962 - B2_Mm2 SINE B2 -14 181 1 3 780 21 36 0 0 chr15 25665049 25665077 -77829897 + AT_rich Low_complexity Low_complexity 1 28 0 3 780 1199 55 7 0 chr15 25665113 25665259 -77829715 - B1_Mus2 SINE Alu 0 147 1 3 780 320 176 0 14 chr15 25665288 25665357 -77829617 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 780 243 0 0 0 chr15 25665400 25665427 -77829547 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 780 275 71 24 0 chr15 25665431 25665473 -77829501 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 780 293 47 23 0 chr15 25665921 25665964 -77829010 + (TTG)n Simple_repeat Simple_repeat 2 45 0 3 780 525 61 0 0 chr15 25665964 25666030 -77828944 - B1_Mm SINE Alu -9 138 73 3 780 504 0 0 0 chr15 25666643 25666699 -77828275 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 780 1033 80 0 42 chr15 25666829 25666972 -77828002 + B1_Mm SINE Alu 1 137 -10 3 780 222 37 0 0 chr15 25666972 25666999 -77827975 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 780 468 312 90 0 chr15 25667806 25667950 -77827024 + ID_B1 SINE B4 2 158 -66 3 780 901 284 94 113 chr15 25667959 25668319 -77826655 - RMER5 LTR ERV1 -12 522 129 3 780 1190 81 0 0 chr15 25668319 25668467 -77826507 + B1_Mus1 SINE Alu 1 148 0 3 780 901 284 94 113 chr15 25668467 25668638 -77826336 - RMER5 LTR ERV1 -406 128 1 3 780 310 246 0 15 chr15 25668639 25668705 -77826269 + ID_B1 SINE B4 141 205 -19 3 780 276 130 0 0 chr15 25668707 25668753 -77826221 + (CATG)n Simple_repeat Simple_repeat 1 46 0 3 780 694 99 37 18 chr15 25668759 25668923 -77826051 + (TAGA)n Simple_repeat Simple_repeat 3 169 0 3 780 194 331 50 50 chr15 25669302 25669461 -77825513 - MIR SINE MIR -89 173 15 3 780 279 0 0 0 chr15 25670453 25670484 -77824490 + (TGGA)n Simple_repeat Simple_repeat 1 31 0 3 780 212 318 17 60 chr15 25670698 25670815 -77824159 - MIRb SINE MIR -111 157 46 3 780 602 286 28 65 chr15 25670976 25671012 -77823962 + MER2 DNA MER2_type 87 117 -228 3 780 1652 42 0 0 chr15 25671012 25671205 -77823769 - B2_Mm1a SINE B2 0 193 1 3 780 602 286 28 65 chr15 25671205 25671223 -77823751 + MER2 DNA MER2_type 118 139 -206 3 780 1345 191 0 0 chr15 25671223 25671448 -77823526 + URR1B DNA MER1_type 1 225 0 3 780 602 286 28 65 chr15 25671448 25671639 -77823335 + MER2 DNA MER2_type 140 323 -22 3 780 297 0 0 0 chr15 25671762 25671795 -77823179 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 780 839 178 7 0 chr15 25671804 25671950 -77823024 - B1_Mus1 SINE Alu 0 148 2 3 780 21 36 0 0 chr15 25672428 25672456 -77822518 + AT_rich Low_complexity Low_complexity 1 28 0 3 780 200 200 0 52 chr15 25672746 25672804 -77822170 + (TATG)n Simple_repeat Simple_repeat 1 55 0 3 780 1093 74 0 0 chr15 25672896 25673031 -77821943 - B1_Mus1 SINE Alu -13 135 1 3 780 213 107 34 51 chr15 25673048 25673107 -77821867 + (TATAA)n Simple_repeat Simple_repeat 5 62 0 3 780 333 0 0 0 chr15 25673117 25673154 -77821820 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 780 387 327 68 0 chr15 25673590 25673752 -77821222 - MIRb SINE MIR -8 260 88 3 780 231 61 0 0 chr15 25674318 25674351 -77820623 + (TTG)n Simple_repeat Simple_repeat 2 34 0 3 780 1146 79 0 0 chr15 25674351 25674490 -77820484 - B1_Mus1 SINE Alu -8 140 2 3 780 626 37 12 0 chr15 25675508 25675589 -77819385 + (TC)n Simple_repeat Simple_repeat 1 82 0 3 780 243 0 0 0 chr15 25676807 25676834 -77818140 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 780 410 269 129 124 chr15 25676851 25677029 -77817945 - B3A SINE B2 -11 187 9 3 780 199 250 11 22 chr15 25677276 25677366 -77817608 + CT-rich Low_complexity Low_complexity 2 90 0 3 780 557 214 43 0 chr15 25677366 25677487 -77817487 - B1_Mus1 SINE Alu -21 127 1 3 780 489 254 29 29 chr15 25677616 25677750 -77817224 - B1_Mus1 SINE Alu 0 147 9 3 780 369 0 0 0 chr15 25677772 25677813 -77817161 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 780 456 236 106 77 chr15 25677843 25678050 -77816924 - B4A SINE B4 -78 214 2 3 780 1207 62 0 0 chr15 25678354 25678500 -77816474 - B1_Mm SINE Alu 0 147 2 3 780 301 194 26 118 chr15 25679156 25679169 -77815805 - ID SINE ID -139 85 17 3 780 332 206 48 0 chr15 25679169 25679232 -77815742 - ID4_ SINE ID -1 82 17 3 780 207 100 0 0 chr15 25679568 25679598 -77815376 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 780 1067 107 15 6 chr15 25679804 25680142 -77814832 + (TCC)n Simple_repeat Simple_repeat 1 340 0 3 780 201 243 0 0 chr15 25680143 25680180 -77814794 + polypyrimidine Low_complexity Low_complexity 1 37 0 3 780 880 165 36 31 chr15 25680180 25680374 -77814600 - B2_Mm2 SINE B2 0 195 1 3 780 229 269 94 31 chr15 25680376 25680472 -77814502 - B4A SINE B4 -190 102 1 3 780 349 263 10 21 chr15 25680487 25680584 -77814390 + RSINE1 SINE B4 2 97 -68 3 780 703 97 0 0 chr15 25681200 25681293 -77813681 + BC1_Mm scRNA scRNA 1 93 -59 3 780 1234 41 0 13 chr15 25681787 25681936 -77813038 + B1_Mus1 SINE Alu 2 148 0 3 780 216 97 0 0 chr15 25681942 25681973 -77813001 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 3 780 816 128 12 124 chr15 25681980 25682141 -77812833 + B1_Mur4 SINE Alu 2 144 -6 3 780 23 0 0 0 chr15 25683380 25683403 -77811571 + AT_rich Low_complexity Low_complexity 1 23 0 3 780 225 0 0 0 chr15 25684397 25684422 -77810552 + (CCCCCA)n Simple_repeat Simple_repeat 4 28 0 3 780 436 93 27 0 chr15 25685320 25685395 -77809579 + (TG)n Simple_repeat Simple_repeat 1 77 0 3 780 295 239 141 0 chr15 25685553 25685624 -77809350 - B1_Mur3 SINE Alu -67 82 2 3 780 259 280 47 47 chr15 25685624 25685639 -77809335 - MT2B LTR ERVL -364 237 152 3 780 23 33 0 0 chr15 25685639 25685669 -77809305 + AT_rich Low_complexity Low_complexity 1 30 0 3 780 4337 112 96 86 chr15 25686624 25687410 -77807564 - L1_Mm LINE L1 -2081 3802 3011 3 780 936 95 65 7 chr15 25687410 25687548 -77807426 - B1_Mus2 SINE Alu 0 147 2 3 780 4337 112 96 86 chr15 25687548 25687666 -77807308 - L1_Mm LINE L1 -2873 3010 2889 3 780 285 217 0 92 chr15 25690015 25690091 -77804883 - ID4 SINE ID -14 69 1 3 781 1230 48 7 0 chr15 25690694 25690841 -77804133 + B1_Mus1 SINE Alu 1 148 0 3 781 24 32 0 0 chr15 25691193 25691224 -77803750 + GC_rich Low_complexity Low_complexity 1 31 0 3 781 282 269 133 67 chr15 25691978 25692010 -77802964 - ID_B1 SINE B4 -71 221 137 4 781 289 239 52 83 chr15 25692010 25692106 -77802868 - PB1D10 SINE Alu -23 94 2 4 781 282 269 133 67 chr15 25692106 25692132 -77802842 - ID_B1 SINE B4 -71 136 62 4 781 802 227 0 30 chr15 25693858 25694026 -77800948 - RSINE1 SINE B4 0 165 3 4 781 475 315 98 26 chr15 25695595 25695859 -77799115 - B4A SINE B4 0 292 10 4 781 908 177 199 6 chr15 25695893 25696069 -77798905 - B3 SINE B2 -6 210 1 4 781 1847 178 56 46 chr15 25696137 25696531 -77798443 - RMER10B LTR ERVL 0 398 1 4 781 413 242 0 69 chr15 25696675 25696777 -77798197 + MIR SINE MIR 80 174 -88 4 781 299 267 33 0 chr15 25697060 25697120 -77797854 - B1F1 SINE Alu -86 63 2 4 781 353 321 0 0 chr15 25697825 25697906 -77797068 + ID SINE ID 2 82 -142 4 781 300 207 158 0 chr15 25697921 25698003 -77796971 + ID_B1 SINE B4 128 222 -2 4 781 764 284 68 5 chr15 25698578 25698797 -77796177 + B4 SINE B4 50 282 -10 4 781 273 119 0 0 chr15 25698815 25698857 -77796117 + (CAGA)n Simple_repeat Simple_repeat 3 44 0 4 781 550 188 34 95 chr15 25699567 25699714 -77795260 - B1F1 SINE Alu -2 147 10 4 781 484 231 37 115 chr15 25699714 25699758 -77795216 - ID_B1 SINE B4 0 224 49 4 781 954 187 0 0 chr15 25699972 25700138 -77794836 + URR1B DNA MER1_type 60 225 0 4 781 709 236 7 14 chr15 25700244 25700390 -77794584 + B3A SINE B2 38 182 -16 4 781 427 267 33 8 chr15 25700403 25700524 -77794450 + Lx8 LINE L1 7157 7280 -193 4 781 1219 41 0 20 chr15 25700570 25700720 -77794254 - B1_Mus1 SINE Alu 0 148 2 4 781 255 307 26 13 chr15 25700724 25700800 -77794174 + B4 SINE B4 199 275 -17 4 781 1298 106 5 11 chr15 25700852 25700883 -77794091 - B2_Mm1a SINE B2 -3 190 161 4 781 423 0 0 0 chr15 25700883 25700930 -77794044 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 4 781 1298 106 5 11 chr15 25700930 25701089 -77793885 - B2_Mm1a SINE B2 -33 160 1 4 781 375 41 0 0 chr15 25701640 25701689 -77793285 + (CAGG)n Simple_repeat Simple_repeat 1 49 0 4 781 1035 250 206 22 chr15 25701899 25702579 -77792395 - Lx8 LINE L1 -97 7376 6572 4 781 375 23 0 0 chr15 25702634 25702678 -77792296 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 781 279 0 0 0 chr15 25702918 25702949 -77792025 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 781 821 90 0 0 chr15 25702967 25703078 -77791896 - B1_Mus1 SINE Alu -8 140 30 4 781 335 264 35 11 chr15 25703084 25703189 -77791785 - B4A SINE B4 -99 193 85 4 781 212 59 29 0 chr15 25703328 25703362 -77791612 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 781 181 161 0 0 chr15 25703364 25703395 -77791579 + MIRm SINE MIR 232 262 -14 4 781 189 0 0 0 chr15 25704697 25704718 -77790256 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 781 216 111 0 0 chr15 25705242 25705278 -77789696 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 781 220 212 15 15 chr15 25705946 25706013 -77788961 + CT-rich Low_complexity Low_complexity 3 69 0 4 781 855 78 0 0 chr15 25706304 25706420 -77788554 + (GA)n Simple_repeat Simple_repeat 1 116 0 4 781 21 0 0 0 chr15 25706557 25706578 -77788396 + GC_rich Low_complexity Low_complexity 1 21 0 4 781 218 32 32 0 chr15 25706947 25706978 -77787996 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 781 232 224 0 121 chr15 25706979 25707045 -77787929 - tRNA-Ala-GCY_ tRNA tRNA -17 58 1 4 781 762 264 5 45 chr15 25707082 25707284 -77787690 - B3A SINE B2 0 198 5 4 781 297 75 0 0 chr15 25708486 25708526 -77786448 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 781 507 169 0 12 chr15 25708532 25708616 -77786358 - B3 SINE B2 -133 83 1 4 781 632 232 34 47 chr15 25708744 25708893 -77786081 - B1_Mur1 SINE Alu 0 149 3 4 781 226 323 0 0 chr15 25709500 25709562 -77785412 + GA-rich Low_complexity Low_complexity 2 63 0 4 781 569 297 60 39 chr15 25709764 25709946 -77785028 - B4A SINE B4 -105 187 2 4 781 213 302 0 0 chr15 25709980 25710033 -77784941 + ID4_ SINE ID 2 54 -29 4 781 591 253 16 48 chr15 25710486 25710673 -77784301 - MLT1B LTR MaLR -200 190 10 4 781 591 268 86 40 chr15 25711672 25711870 -77783104 - B4 SINE B4 -83 209 3 4 781 207 0 0 0 chr15 25712201 25712224 -77782750 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 781 1148 51 0 28 chr15 25712224 25712365 -77782609 - B1_Mus1 SINE Alu -11 137 1 4 781 183 42 0 0 chr15 25712824 25712848 -77782126 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 4 781 351 0 0 0 chr15 25713178 25713217 -77781757 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 781 213 180 0 0 chr15 25713731 25713781 -77781193 + (TCTG)n Simple_repeat Simple_repeat 3 52 0 4 781 691 235 98 0 chr15 25713843 25714047 -77780927 + Lx9 LINE L1 7211 7434 -210 4 781 295 284 115 35 chr15 25714705 25714818 -77780156 + PB1 SINE Alu 2 123 -4 4 781 685 297 53 24 chr15 25715839 25716046 -77778928 - B4 SINE B4 0 292 80 4 781 444 274 58 15 chr15 25717006 25717143 -77777831 + B1F SINE Alu 1 143 -6 4 781 2083 156 85 13 chr15 25718062 25718439 -77776535 - MTB_Mm LTR MaLR -3 404 1 4 781 423 281 54 98 chr15 25718759 25718964 -77776010 + RMER30 DNA MER1_type 7 202 0 4 781 300 313 33 26 chr15 25719180 25719331 -77775643 - L1MC5 LINE L1 -822 7139 6988 4 781 1707 209 88 8 chr15 25719854 25720239 -77774735 + MTD LTR MaLR 1 416 -3 4 781 274 289 26 0 chr15 25720324 25720400 -77774574 - RSINE1 SINE B4 -2 163 86 4 781 516 259 45 84 chr15 25720488 25720690 -77774284 - B3A SINE B2 -3 195 2 4 781 1309 14 0 13 chr15 25721157 25721306 -77773668 - B1_Mm SINE Alu 0 147 1 4 781 300 252 63 0 chr15 25721426 25721523 -77773451 + PB1D7 SINE Alu 11 115 -5 4 781 403 167 28 0 chr15 25721531 25721603 -77773371 + ID4_ SINE ID 7 80 -3 4 781 321 217 48 0 chr15 25721603 25721614 -77773360 + ID_B1 SINE B4 7 93 -131 4 781 48 0 0 0 chr15 25722121 25722169 -77772805 + AT_rich Low_complexity Low_complexity 1 48 0 4 781 247 222 114 53 chr15 25722176 25722221 -77772753 + Tigger7 DNA MER2_type 2252 2296 -195 4 781 204 40 0 0 chr15 25722221 25722246 -77772728 + (TGG)n Simple_repeat Simple_repeat 3 27 0 4 781 247 222 114 53 chr15 25722246 25722314 -77772660 + Tigger7 DNA MER2_type 2297 2372 -119 4 781 192 271 21 0 chr15 25723453 25723501 -77771473 - MIR SINE MIR -66 196 148 4 781 182 230 62 47 chr15 25723691 25723755 -77771219 - L3 LINE CR1 -2105 2384 2320 4 781 378 91 0 0 chr15 25724772 25724827 -77770147 + (TATG)n Simple_repeat Simple_repeat 4 58 0 4 781 1233 61 0 0 chr15 25725599 25725747 -77769227 - B1_Mus1 SINE Alu 0 148 1 4 781 1277 77 21 21 chr15 25725784 25725970 -77769004 + B2_Mm1a SINE B2 1 186 -7 4 781 757 246 14 84 chr15 25726221 25726434 -77768540 - B3A SINE B2 0 198 1 4 781 872 77 241 19 chr15 25726637 25726795 -77768179 - B2_Mm2 SINE B2 -2 193 1 4 781 306 257 98 27 chr15 25727252 25727364 -77767610 - PB1D7 SINE Alu 0 120 1 4 781 256 78 39 19 chr15 25727985 25728037 -77766937 + (GTTTG)n Simple_repeat Simple_repeat 2 54 0 4 781 1482 67 5 25 chr15 25728045 25728243 -77766731 - B2_Mm2 SINE B2 0 195 2 4 781 887 174 0 0 chr15 25728252 25728396 -77766578 - B1_Mur4 SINE Alu -6 144 1 4 781 269 269 179 34 chr15 25729280 25729517 -77765457 - B4 SINE B4 -19 273 3 4 781 253 288 0 12 chr15 25729672 25729753 -77765221 - ID2 SINE ID -3 80 1 4 781 1233 43 0 0 chr15 25730297 25730438 -77764536 - B1_Mm SINE Alu -5 142 2 4 781 244 176 115 125 chr15 25731302 25731384 -77763590 - MLT1G1 LTR MaLR -379 200 118 4 781 380 151 13 64 chr15 25731384 25731462 -77763512 + ID4_ SINE ID 1 74 -9 4 781 244 176 115 125 chr15 25731462 25731483 -77763491 - MLT1G1 LTR MaLR -462 117 98 4 781 451 284 61 142 chr15 25732343 25732540 -77762434 + B3A SINE B2 15 195 0 4 781 304 274 41 31 chr15 25732551 25732649 -77762325 + PB1D10 SINE Alu 1 99 -18 4 781 797 165 159 36 chr15 25733278 25733473 -77761501 + URR1A DNA MER1_type 1 219 -7 4 781 278 300 22 0 chr15 25733553 25733643 -77761331 + Tigger5 DNA MER2_type 2135 2226 -180 4 781 324 0 0 0 chr15 25734594 25734630 -77760344 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 781 242 340 89 40 chr15 25734801 25734813 -77760161 + ID SINE ID 70 86 -138 4 781 328 294 85 38 chr15 25734813 25734919 -77760055 + PB1D10 SINE Alu 1 111 -6 4 781 393 159 49 67 chr15 25734924 25735022 -77759952 + B1_Mur3 SINE Alu 2 95 -25 4 781 249 33 0 0 chr15 25735607 25735637 -77759337 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 781 721 104 122 36 chr15 25737108 25737247 -77757727 + Lx4B LINE L1 6908 7058 0 4 781 202 128 64 0 chr15 25738093 25738140 -77756834 + T-rich Low_complexity Low_complexity 2 51 0 4 781 315 206 16 0 chr15 25738179 25738242 -77756732 - RSINE1 SINE B4 -99 66 3 4 781 239 197 197 0 chr15 25738445 25738511 -77756463 - B1_Mus1 SINE Alu -68 80 2 4 781 242 267 13 51 chr15 25738544 25738623 -77756351 - ID4_ SINE ID 0 83 8 4 781 798 134 60 0 chr15 25739283 25739417 -77755557 + URR1A DNA MER1_type 85 226 0 4 781 401 255 88 53 chr15 25739417 25739453 -77755521 - CYRA11_Mm Unknown Y-chromosome -304 313 138 4 781 729 203 211 17 chr15 25740640 25740820 -77754154 + B3 SINE B2 1 215 -1 4 781 213 119 0 0 chr15 25742537 25742579 -77752395 + (T)n Simple_repeat Simple_repeat 1 42 0 5 781 903 254 121 103 chr15 25743755 25744158 -77750816 - RMER4A LTR ERVK -4 462 62 5 781 396 59 0 0 chr15 25744158 25744209 -77750765 + (CATA)n Simple_repeat Simple_repeat 4 54 0 5 781 903 254 121 103 chr15 25744209 25744243 -77750731 - RMER4A LTR ERVK -405 61 18 5 781 291 247 199 11 chr15 25744407 25744636 -77750338 + L1_Mur1 LINE L1 5220 5483 -403 5 781 3733 199 97 51 chr15 25744636 25744942 -77750032 - RLTR25A LTR ERVK 0 1103 661 5 781 1023 109 7 0 chr15 25744942 25745079 -77749895 - B1_Mus1 SINE Alu -10 138 1 5 781 3733 168 119 25 chr15 25745079 25745578 -77749396 - RLTR25A LTR ERVK -443 660 137 5 781 315 122 0 0 chr15 25745578 25745627 -77749347 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 781 3733 168 119 25 chr15 25745627 25745743 -77749231 - RLTR25A LTR ERVK -967 136 1 5 781 355 218 104 66 chr15 25745743 25745865 -77749109 + L1M3 LINE L1 5521 5653 -650 5 781 404 297 76 54 chr15 25745961 25746146 -77748828 - MER2 DNA MER2_type -1 344 156 5 781 270 0 0 0 chr15 25746972 25747002 -77747972 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 781 505 264 114 0 chr15 25747185 25747332 -77747642 - RSINE1 SINE B4 0 165 2 5 781 413 286 176 6 chr15 25747402 25747742 -77747232 + L1_Mur2 LINE L1 5421 5820 -60 5 781 258 56 0 0 chr15 25748037 25748073 -77746901 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 781 510 291 16 0 chr15 25748079 25748206 -77746768 - RSINE1 SINE B4 -36 129 1 5 781 837 83 1 16 chr15 25748930 25749065 -77745909 - B1_Mm SINE Alu -10 138 5 5 781 248 83 28 0 chr15 25749237 25749273 -77745701 - MLT1H LTR MaLR 0 549 513 5 781 553 203 117 14 chr15 25749307 25749452 -77745522 - MTEb LTR MaLR -21 358 199 5 781 327 260 52 0 chr15 25749463 25749540 -77745434 - MTEb LTR MaLR -225 154 74 5 781 1451 147 0 9 chr15 25749613 25749840 -77745134 - URR1B DNA MER1_type 0 225 1 5 781 315 319 108 112 chr15 25750016 25750274 -77744700 - MLT1H LTR MaLR -292 257 1 5 781 2975 139 30 51 chr15 25750374 25750965 -77744009 - RMER6C LTR ERVK 0 690 112 5 781 298 321 105 18 chr15 25751343 25751560 -77743414 + MLT1G1 LTR MaLR 2 248 -307 5 781 310 91 36 0 chr15 25751588 25751643 -77743331 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 781 343 299 170 7 chr15 25751762 25751897 -77743077 + MLT1G1 LTR MaLR 422 578 -1 5 781 338 260 94 0 chr15 25752133 25752229 -77742745 + MLT1G1-int LTR MaLR 333 437 -1052 5 781 675 152 0 19 chr15 25752328 25752435 -77742539 + B1_Mur2 SINE Alu 2 106 -43 5 781 542 174 5 3 chr15 25752854 25752961 -77742013 - B1_Mur3 SINE Alu -22 127 20 5 781 365 351 20 7 chr15 25753255 25753404 -77741570 + HERV16-int LTR ERVL 1724 1874 -3122 5 781 796 242 0 16 chr15 25753722 25753911 -77741063 - Lx9 LINE L1 -278 7366 7181 5 781 342 98 0 0 chr15 25754306 25754357 -77740617 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 781 812 263 162 26 chr15 25754359 25754664 -77740310 + MTD LTR MaLR 35 393 -28 5 781 429 70 0 0 chr15 25754793 25754850 -77740124 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 781 240 246 0 34 chr15 25755001 25755060 -77739914 - L2 LINE L2 -2560 859 803 5 781 440 207 0 12 chr15 25755486 25755569 -77739405 - ORR1D2 LTR MaLR -182 188 107 5 781 251 105 0 26 chr15 25755573 25755612 -77739362 - ORR1D2 LTR MaLR -226 144 107 5 781 229 105 0 26 chr15 25755616 25755655 -77739319 - ORR1D2 LTR MaLR -226 144 107 5 781 251 105 0 26 chr15 25755659 25755698 -77739276 - ORR1D2 LTR MaLR -226 144 107 5 781 257 79 0 26 chr15 25755702 25755741 -77739233 - ORR1D2 LTR MaLR -226 144 107 5 781 604 211 6 107 chr15 25755745 25755904 -77739070 - ORR1D2 LTR MaLR -226 144 2 5 781 621 328 97 31 chr15 25756331 25756818 -77738156 + MLT2B1 LTR ERVL 1 519 -1 5 781 782 207 6 0 chr15 25756894 25757073 -77737901 + CT-rich Low_complexity Low_complexity 1 180 0 5 781 372 349 0 9 chr15 25757176 25757286 -77737688 - PB1 SINE Alu -12 115 7 5 781 230 247 34 80 chr15 25758137 25758225 -77736749 + MTE2a LTR MaLR 281 364 -15 5 781 459 0 0 0 chr15 25758850 25758901 -77736073 + (TC)n Simple_repeat Simple_repeat 1 51 0 5 781 411 315 0 9 chr15 25758997 25759109 -77735865 - RSINE1 SINE B4 -1 164 54 5 781 1166 253 63 114 chr15 25759291 25759336 -77735638 - MT2A LTR ERVL -8 525 488 5 781 261 0 0 0 chr15 25759336 25759365 -77735609 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 781 1166 253 63 114 chr15 25759365 25759872 -77735102 - MT2A LTR ERVL -46 487 1 5 781 221 30 61 0 chr15 25760189 25760222 -77734752 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 781 333 0 0 0 chr15 25760564 25760601 -77734373 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 781 1317 263 29 12 chr15 25761006 25761418 -77733556 - MTD LTR MaLR 0 419 1 5 781 350 325 89 49 chr15 25761480 25761726 -77733248 - L1MC4 LINE L1 -599 7443 7188 5 781 405 0 0 0 chr15 25761821 25761866 -77733108 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 781 265 305 156 22 chr15 25761940 25762171 -77732803 - L1MC4 LINE L1 -1069 6926 6665 5 781 260 309 87 43 chr15 25762987 25763102 -77731872 + B4 SINE B4 3 122 -170 5 781 264 306 0 31 chr15 25763144 25763208 -77731766 + B4 SINE B4 231 292 0 5 781 597 28 0 0 chr15 25763252 25763323 -77731651 + (GGA)n Simple_repeat Simple_repeat 2 72 0 5 781 3215 68 18 0 chr15 25763656 25764056 -77730918 - MTB_Mm LTR MaLR 0 407 1 5 781 330 203 103 22 chr15 25764529 25764665 -77730309 + RMER10A LTR ERVL 258 404 -38 5 781 352 379 14 0 chr15 25764884 25765024 -77729950 + MTE-int LTR MaLR 518 659 -921 5 781 719 346 93 47 chr15 25765666 25766288 -77728686 + MER21B LTR ERV1 126 776 -87 5 781 315 0 0 0 chr15 25767109 25767144 -77727830 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 781 1097 264 83 30 chr15 25767228 25767567 -77727407 - ORR1D2 LTR MaLR 0 370 14 5 781 365 224 50 37 chr15 25767650 25767789 -77727185 + MLT1A1 LTR MaLR 302 450 -17 5 781 738 278 58 16 chr15 25768040 25768187 -77726787 + B3A SINE B2 1 153 -45 5 781 252 0 0 0 chr15 25768187 25768215 -77726759 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 781 738 278 58 16 chr15 25768215 25768257 -77726717 + B3A SINE B2 154 197 -1 5 781 561 328 23 6 chr15 25768656 25768831 -77726143 + MER91A DNA Tip100 17 194 -2 5 781 180 0 0 0 chr15 25769426 25769446 -77725528 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 781 780 188 0 80 chr15 25770620 25770770 -77724204 - B1_Mur1 SINE Alu 0 149 12 5 781 217 257 153 32 chr15 25771751 25771884 -77723090 + L2b LINE L2 3215 3378 -9 5 781 186 43 0 0 chr15 25773021 25773044 -77721930 + (CCCG)n Simple_repeat Simple_repeat 3 25 0 5 781 196 77 51 0 chr15 25773959 25773998 -77720976 + (TGGGGG)n Simple_repeat Simple_repeat 6 46 0 5 781 250 372 63 63 chr15 25775004 25775371 -77719603 - L1MC LINE L1 -2191 5691 5325 5 781 309 26 0 0 chr15 25775503 25775541 -77719433 + (GA)n Simple_repeat Simple_repeat 1 38 0 5 781 799 269 119 11 chr15 25775560 25775820 -77719154 - B4A SINE B4 -4 288 1 5 781 24 53 0 0 chr15 25775856 25775894 -77719080 + AT_rich Low_complexity Low_complexity 1 38 0 5 781 806 160 0 0 chr15 25776269 25776394 -77718580 - B1_Mur3 SINE Alu -15 134 10 5 781 363 289 29 0 chr15 25776397 25776501 -77718473 - PB1D7 SINE Alu -13 107 1 5 781 216 0 0 0 chr15 25776634 25776658 -77718316 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 5 781 1904 146 38 144 chr15 25777344 25777768 -77717206 - ORR1B1 LTR MaLR -15 379 1 5 781 438 108 0 0 chr15 25778455 25778520 -77716454 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 781 561 273 39 0 chr15 25778532 25778660 -77716314 - B3A SINE B2 -30 168 36 5 781 217 241 230 46 chr15 25778584 25778671 -77716303 - B4 SINE B4 -172 120 18 5 781 1129 70 0 27 chr15 25778675 25778823 -77716151 - B1_Mus2 SINE Alu -2 145 2 5 781 385 339 115 53 chr15 25778825 25778971 -77716003 - L1ME2 LINE L1 -2 6177 6032 5 781 1727 146 62 101 chr15 25778971 25779103 -77715871 - ORR1D1 LTR MaLR 0 374 244 5 781 754 47 0 18 chr15 25779103 25779212 -77715762 + (CAGG)n Simple_repeat Simple_repeat 4 110 0 5 781 1727 146 62 101 chr15 25779212 25779467 -77715507 - ORR1D1 LTR MaLR -131 243 4 5 781 385 371 104 4 chr15 25779467 25779658 -77715316 - L1ME2 LINE L1 -133 6031 5817 5 781 762 176 0 37 chr15 25779659 25779795 -77715179 - B1_Mur3 SINE Alu 0 149 19 5 781 213 39 0 0 chr15 25779810 25779836 -77715138 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 5 781 1269 135 20 5 chr15 25781121 25781322 -77713652 + URR1B DNA MER1_type 22 225 0 5 781 324 0 0 0 chr15 25781373 25781409 -77713565 + (TC)n Simple_repeat Simple_repeat 2 37 0 5 781 304 250 0 0 chr15 25781519 25781575 -77713399 + MERVK26-int LTR ERVK 6863 6918 -1 5 781 2649 212 125 69 chr15 25781577 25782391 -77712583 + RMER13A LTR ERVK 1 860 0 5 781 1105 259 36 18 chr15 25782397 25782672 -77712302 - B4A SINE B4 -6 286 7 5 781 243 278 133 0 chr15 25782669 25782759 -77712215 + MER3 DNA MER1_type 108 209 0 5 781 1239 27 0 7 chr15 25783000 25783147 -77711827 + B1_Mus1 SINE Alu 3 148 0 5 781 1148 221 193 7 chr15 25783195 25783496 -77711478 + ORR1D2 LTR MaLR 1 357 -13 5 781 22 0 0 0 chr15 25784505 25784527 -77710447 + GC_rich Low_complexity Low_complexity 1 22 0 5 781 310 276 101 36 chr15 25784834 25784973 -77710001 + MLT1A1 LTR MaLR 259 406 -2 5 781 309 305 9 9 chr15 25785326 25785432 -77709542 - PB1D10 SINE Alu -10 107 2 5 781 432 0 0 0 chr15 25786194 25786242 -77708732 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 781 586 335 6 6 chr15 25786427 25786607 -77708367 + MLT1A0 LTR MaLR 80 259 -106 5 781 22 0 0 0 chr15 25787112 25787134 -77707840 + AT_rich Low_complexity Low_complexity 1 22 0 5 781 1434 279 151 8 chr15 25787484 25787989 -77706985 - RCHARR1 DNA MER1_type -263 711 135 5 781 410 271 177 147 chr15 25788942 25788998 -77705976 - MLT1A1 LTR MaLR -12 396 346 5 781 388 91 30 0 chr15 25788998 25789064 -77705910 + (TA)n Simple_repeat Simple_repeat 1 68 0 5 781 695 207 15 0 chr15 25789069 25789204 -77705770 - B1F2 SINE Alu -11 138 2 5 781 410 271 177 147 chr15 25789204 25789508 -77705466 - MLT1A1 LTR MaLR -63 345 19 5 781 299 169 31 0 chr15 25790474 25790539 -77704435 + (TATG)n Simple_repeat Simple_repeat 1 67 0 5 781 316 270 0 22 chr15 25790594 25790776 -77704198 + (CA)n Simple_repeat Simple_repeat 2 179 0 5 781 416 104 0 15 chr15 25791153 25791221 -77703753 + (TCC)n Simple_repeat Simple_repeat 3 69 0 5 781 393 58 0 0 chr15 25791227 25791279 -77703695 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 781 609 272 76 111 chr15 25791285 25791574 -77703400 - B4 SINE B4 -12 280 2 5 781 1021 29 15 0 chr15 25792029 25792166 -77702808 + (TG)n Simple_repeat Simple_repeat 1 139 0 6 781 306 0 0 0 chr15 25792304 25792338 -77702636 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 781 587 344 160 48 chr15 25792541 25793128 -77701846 - HAL1 LINE L1 -1048 1459 807 6 781 1123 261 53 38 chr15 25794121 25794460 -77700514 - MTEb LTR MaLR 0 379 36 6 781 21 0 0 0 chr15 25794648 25794669 -77700305 + AT_rich Low_complexity Low_complexity 1 21 0 6 781 454 188 12 0 chr15 25794697 25794777 -77700197 - B3 SINE B2 -135 81 1 6 781 235 119 143 0 chr15 25795261 25795303 -77699671 - MTEb LTR MaLR -323 56 9 6 781 313 308 8 70 chr15 25795427 25795556 -77699418 - L2b LINE L2 -233 3142 3022 6 781 273 271 77 92 chr15 25796299 25796429 -77698545 - MIR SINE MIR -55 213 79 6 781 225 0 0 0 chr15 25796430 25796455 -77698519 + (TG)n Simple_repeat Simple_repeat 1 25 0 6 781 25 31 0 0 chr15 25796796 25796828 -77698146 + AT_rich Low_complexity Low_complexity 1 32 0 6 781 282 20 39 39 chr15 25797875 25797927 -77697047 + (TTTTTG)n Simple_repeat Simple_repeat 3 54 0 6 781 1175 35 0 0 chr15 25797927 25798070 -77696904 - B1_Mus1 SINE Alu 0 148 6 6 781 552 186 39 130 chr15 25797932 25798086 -77696888 - B4 SINE B4 -71 221 82 6 781 267 279 135 35 chr15 25798631 25798772 -77696202 - RMER30 DNA MER1_type -1 201 47 6 781 236 250 0 0 chr15 25798784 25798832 -77696142 + Charlie12 DNA MER1_type 2826 2873 0 6 781 23 0 0 0 chr15 25798871 25798894 -77696080 + AT_rich Low_complexity Low_complexity 1 23 0 6 781 504 281 89 0 chr15 25799606 25799741 -77695233 - ID_B1 SINE B4 0 224 78 6 781 1336 274 153 49 chr15 25800246 25800937 -77694037 + MTD LTR MaLR 6 418 -1 6 781 231 88 0 0 chr15 25802474 25802508 -77692466 + (CATA)n Simple_repeat Simple_repeat 1 34 0 6 781 200 123 33 66 chr15 25803000 25803061 -77691913 + A-rich Low_complexity Low_complexity 2 60 0 6 781 832 118 7 14 chr15 25803689 25803835 -77691139 + (TTC)n Simple_repeat Simple_repeat 3 147 0 6 781 307 277 69 91 chr15 25805216 25805391 -77689583 + MLT1B LTR MaLR 178 348 -42 6 781 265 315 11 11 chr15 25805621 25805714 -77689260 + MLT1A0 LTR MaLR 266 358 -7 6 781 184 244 0 22 chr15 25805894 25805940 -77689034 + MER5B DNA MER1_type 110 154 -24 6 781 621 212 0 50 chr15 25806128 25806267 -77688707 - B3 SINE B2 -82 134 3 6 781 207 288 15 0 chr15 25806272 25806338 -77688636 + CT-rich Low_complexity Low_complexity 2 68 0 6 781 735 254 26 21 chr15 25807097 25807286 -77687688 + B4A SINE B4 2 191 -101 6 781 1718 211 90 33 chr15 25808141 25808346 -77686628 - Lx9 LINE L1 -2 7642 7419 6 781 450 0 0 0 chr15 25808346 25808396 -77686578 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 781 1718 211 90 33 chr15 25808396 25808700 -77686274 - Lx9 LINE L1 -226 7418 7104 6 781 198 82 19 58 chr15 25808827 25808879 -77686095 + A-rich Low_complexity Low_complexity 2 51 0 6 781 575 294 26 0 chr15 25808882 25809035 -77685939 + ID_B1 SINE B4 3 159 -65 6 781 1185 61 0 7 chr15 25809710 25809858 -77685116 + B1_Mm SINE Alu 1 147 0 6 781 183 67 65 22 chr15 25809865 25809911 -77685063 + A-rich Low_complexity Low_complexity 4 51 0 6 781 1449 281 71 42 chr15 25811082 25811746 -77683228 + L1MC2 LINE L1 5652 6334 -10 6 781 257 259 230 9 chr15 25811817 25811961 -77683013 + MIRb SINE MIR 2 170 -98 6 781 268 320 59 20 chr15 25812628 25812781 -77682193 + L1M1 LINE L1 5615 5773 -530 6 781 192 40 0 0 chr15 25812804 25812829 -77682145 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 6 781 34 24 0 0 chr15 25812947 25812988 -77681986 + AT_rich Low_complexity Low_complexity 1 41 0 6 781 1395 240 80 14 chr15 25813197 25813561 -77681413 + Lx8 LINE L1 6823 7210 -263 6 781 315 293 65 35 chr15 25814104 25814274 -77680700 + L1MC5 LINE L1 7271 7445 -516 6 781 324 338 40 7 chr15 25814486 25814638 -77680336 + RSINE1 SINE B4 7 163 -2 6 781 429 330 28 42 chr15 25814690 25814902 -77680072 + B4A SINE B4 8 216 -76 6 781 2469 109 0 6 chr15 25815241 25815592 -77679382 + Lx LINE L1 6301 6649 -5 6 781 1386 71 16 0 chr15 25815999 25816181 -77678793 + B2_Mm1a SINE B2 4 188 -5 6 781 1695 229 23 6 chr15 25817189 25817536 -77677438 + MTC LTR MaLR 1 353 -68 6 781 468 0 0 0 chr15 25817694 25817746 -77677228 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 781 2792 81 71 0 chr15 25817752 25818146 -77676828 - BGLII_Mus LTR ERVK 0 422 1 6 781 932 204 32 11 chr15 25818310 25818498 -77676476 - MTEb LTR MaLR -29 350 159 6 781 765 33 0 0 chr15 25818585 25818677 -77676297 + (TCTCC)n Simple_repeat Simple_repeat 2 93 0 6 781 518 254 0 33 chr15 25818704 25818826 -77676148 - PB1D9 SINE Alu -2 118 1 6 781 497 242 30 0 chr15 25819502 25819601 -77675373 - PB1D7 SINE Alu -9 111 10 6 781 322 270 11 63 chr15 25819520 25819615 -77675359 - ID_B1 SINE B4 -55 169 80 6 781 342 0 0 0 chr15 25819620 25819658 -77675316 + (TC)n Simple_repeat Simple_repeat 1 38 0 6 781 439 188 0 12 chr15 25819683 25819764 -77675210 - ID4_ SINE ID 0 83 4 6 781 684 23 34 0 chr15 25820581 25820669 -77674305 + B1_Mm SINE Alu 57 147 0 6 781 194 83 56 0 chr15 25820671 25820707 -77674267 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 6 782 379 278 8 31 chr15 25821414 25821544 -77673430 + ID_B1 SINE B4 98 224 0 6 782 258 348 120 18 chr15 25821685 25821852 -77673122 - MLT1D LTR MaLR -5 462 279 6 782 453 295 103 21 chr15 25821863 25822057 -77672917 - MLT1D LTR MaLR -242 263 54 6 782 1198 77 119 0 chr15 25822114 25822282 -77672692 - B2_Mm2 SINE B2 -5 190 3 6 782 4098 53 4 4 chr15 25822293 25822803 -77672171 - L1_Mus2 LINE L1 0 6566 6057 6 782 852 163 0 0 chr15 25823655 25823808 -77671166 + CT-rich Low_complexity Low_complexity 3 155 0 6 782 252 400 35 59 chr15 25823924 25824126 -77670848 - L4 LINE RTE -321 1708 1512 6 782 603 0 0 0 chr15 25824138 25824205 -77670769 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 6 782 420 143 0 0 chr15 25824249 25824333 -77670641 + (CAAT)n Simple_repeat Simple_repeat 2 85 0 6 782 298 143 58 23 chr15 25824333 25824419 -77670555 + (TCTA)n Simple_repeat Simple_repeat 2 90 0 6 782 368 353 108 18 chr15 25825559 25825836 -77669138 - L1MC3 LINE L1 -179 7606 7305 6 782 374 262 70 110 chr15 25826437 25826503 -77668471 + L1MA4 LINE L1 5713 5780 -520 6 782 220 53 53 0 chr15 25826503 25826541 -77668433 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 782 374 262 70 110 chr15 25826541 25826701 -77668273 + L1MA4 LINE L1 5781 5930 -370 6 782 252 70 0 23 chr15 25827948 25827992 -77666982 - Lx4A LINE L1 0 7058 7016 6 782 189 154 0 0 chr15 25828014 25828053 -77666921 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 782 324 0 0 0 chr15 25828062 25828098 -77666876 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 6 782 312 258 0 0 chr15 25828585 25828651 -77666323 - tRNA-Ala-GCY_ tRNA tRNA -9 66 1 6 782 1035 217 38 5 chr15 25829443 25829656 -77665318 + ID_B1 SINE B4 3 222 -2 6 782 1647 115 20 206 chr15 25829866 25830370 -77664604 - RMER17C LTR ERVK 0 410 1 6 782 1264 188 63 9 chr15 25831005 25831322 -77663652 - RMER17C LTR ERVK 0 410 77 6 782 820 181 81 34 chr15 25831307 25831542 -77663432 - RMER17C LTR ERVK -164 246 1 6 782 397 239 208 21 chr15 25831779 25831971 -77663003 + MLT1D LTR MaLR 15 242 -263 6 782 3343 30 18 0 chr15 25832136 25832529 -77662445 - MTB LTR MaLR 0 400 1 6 782 528 301 77 35 chr15 25833436 25833774 -77661200 - L1MB5 LINE L1 -103 6071 5720 6 782 258 183 27 27 chr15 25833845 25833921 -77661053 + (TATATG)n Simple_repeat Simple_repeat 1 76 0 6 782 576 0 0 0 chr15 25833921 25833985 -77660989 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 6 782 217 232 41 31 chr15 25833985 25834006 -77660968 + (TATG)n Simple_repeat Simple_repeat 1 20 0 6 782 771 221 23 46 chr15 25834825 25835043 -77659931 - B3 SINE B2 -2 214 2 6 782 310 250 44 67 chr15 25835418 25835508 -77659466 - ORR1E LTR MaLR -268 91 4 6 782 286 268 88 66 chr15 25836005 25836141 -77658833 - MLT1A LTR MaLR -11 363 225 6 782 186 254 169 0 chr15 25836704 25836763 -77658211 + L4 LINE RTE 1492 1560 -469 6 782 316 301 38 28 chr15 25837333 25837439 -77657535 + PB1D7 SINE Alu 1 107 -13 6 782 180 0 0 0 chr15 25837446 25837466 -77657508 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 6 782 851 272 124 59 chr15 25837509 25838187 -77656787 - RMER13A LTR ERVK -19 841 98 6 782 200 0 0 91 chr15 25838222 25838255 -77656719 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 6 782 348 222 33 81 chr15 25838593 25838733 -77656241 - MLT-int LTR MaLR -19 1716 1609 6 782 255 257 71 0 chr15 25839011 25839081 -77655893 - PB1 SINE Alu -20 107 33 6 782 527 236 19 0 chr15 25839105 25839211 -77655763 - ID_B1 SINE B4 -7 217 110 6 782 282 216 40 0 chr15 25839257 25839331 -77655643 - Lx8 LINE L1 -1 7472 7396 6 782 636 287 25 0 chr15 25841355 25841512 -77653462 - MTE2b LTR MaLR -216 163 3 6 782 385 274 74 149 chr15 25841579 25841875 -77653099 - ORR1E LTR MaLR -5 354 81 6 782 203 224 12 50 chr15 25842557 25842637 -77652337 + (TCTA)n Simple_repeat Simple_repeat 1 77 0 6 782 3148 51 13 0 chr15 25842915 25843305 -77651669 - MTA_Mm LTR MaLR -1 395 1 6 782 426 299 41 99 chr15 25844207 25844378 -77650596 + RSINE1 SINE B4 5 165 0 6 782 276 185 0 0 chr15 25844406 25844460 -77650514 + (TATATG)n Simple_repeat Simple_repeat 5 58 0 6 782 455 114 25 0 chr15 25846263 25846342 -77648632 + (TCTCCC)n Simple_repeat Simple_repeat 5 85 0 6 782 1103 76 7 0 chr15 25846384 25846529 -77648445 + B1_Mus1 SINE Alu 2 147 -1 7 782 570 294 0 0 chr15 25846819 25846965 -77648009 - RSINE1 SINE B4 -19 146 1 7 782 1091 28 7 0 chr15 25847044 25847185 -77647789 + L1Md_F3 LINE L1 6443 6584 0 7 782 313 336 29 79 chr15 25847193 25847332 -77647642 + MLT1A LTR MaLR 34 165 -209 7 782 302 283 102 19 chr15 25847606 25847714 -77647260 - B1F1 SINE Alu 0 149 33 7 782 397 267 102 62 chr15 25848001 25848129 -77646845 + B1F1 SINE Alu 5 137 -12 7 782 297 339 54 16 chr15 25848811 25848940 -77646034 - B1F1 SINE Alu -14 135 2 7 782 2396 155 2 17 chr15 25849108 25849529 -77645445 + Lx LINE L1 6221 6635 -19 7 782 216 0 0 0 chr15 25850542 25850566 -77644408 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 7 782 471 258 112 8 chr15 25850580 25850705 -77644269 - RSINE1 SINE B4 -26 139 2 7 782 180 0 0 0 chr15 25851247 25851267 -77643707 + (ATG)n Simple_repeat Simple_repeat 3 22 0 7 782 447 132 33 0 chr15 25851398 25851489 -77643485 + GA-rich Low_complexity Low_complexity 2 95 0 7 782 222 368 47 55 chr15 25851959 25852195 -77642779 + L2c LINE L2 3136 3369 -18 7 782 238 315 78 61 chr15 25852261 25852376 -77642598 + MIRc SINE MIR 26 142 -126 7 782 434 183 14 0 chr15 25852811 25852882 -77642092 - B3A SINE B2 -119 79 8 7 782 250 279 52 30 chr15 25853017 25853153 -77641821 - MIR SINE MIR -53 215 76 7 782 186 103 0 0 chr15 25854193 25854222 -77640752 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 782 2081 211 134 16 chr15 25854350 25854841 -77640133 - RMER15 LTR ERVL 0 575 27 7 782 398 265 194 66 chr15 25854848 25855090 -77639884 + B4 SINE B4 2 274 -18 7 782 463 289 0 0 chr15 25855216 25855330 -77639644 + PB1D10 SINE Alu 1 114 -3 7 782 294 29 0 0 chr15 25855330 25855365 -77639609 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 782 730 207 64 0 chr15 25855471 25855611 -77639363 + B1_Mur1 SINE Alu 1 149 0 7 782 701 260 79 51 chr15 25855623 25855838 -77639136 - ORR1D2 LTR MaLR -149 221 1 7 782 428 0 0 19 chr15 25855951 25856004 -77638970 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 782 490 226 73 22 chr15 25856030 25856166 -77638808 + MER58B DNA MER1_type 198 340 -1 7 782 490 293 0 35 chr15 25857166 25857311 -77637663 - B1F SINE Alu 0 149 10 7 782 344 316 31 68 chr15 25857171 25857334 -77637640 - ID_B1 SINE B4 -2 222 66 7 782 202 61 0 108 chr15 25857359 25857396 -77637578 + T-rich Low_complexity Low_complexity 3 35 0 7 782 2107 55 0 0 chr15 25857499 25857756 -77637218 - L1Md_T LINE L1 0 6582 6326 7 782 908 223 69 5 chr15 25858666 25858869 -77636105 + B3 SINE B2 1 216 0 7 782 364 341 47 0 chr15 25858872 25859001 -77635973 + MLT2C2 LTR ERVL 19 153 -311 7 782 195 65 65 0 chr15 25859681 25859727 -77635247 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 7 782 455 312 122 21 chr15 25860604 25861023 -77633951 + L1MD3 LINE L1 7397 7857 -138 7 782 450 227 33 84 chr15 25861490 25861602 -77633372 + MLT1A1 LTR MaLR 236 367 -41 7 782 2007 143 136 11 chr15 25861602 25861976 -77632998 + MTC LTR MaLR 1 421 0 7 782 450 214 28 90 chr15 25861976 25862023 -77632951 + MLT1A1 LTR MaLR 368 407 -1 7 782 185 328 56 69 chr15 25863336 25863480 -77631494 + L3 LINE CR1 716 857 -3632 7 782 296 307 78 10 chr15 25864385 25864487 -77630487 - MLT1A0 LTR MaLR -225 140 32 7 782 938 225 9 37 chr15 25864909 25865126 -77629848 - B3 SINE B2 0 216 6 7 782 627 254 65 48 chr15 25865210 25865441 -77629533 - MER33 DNA MER1_type -48 276 42 7 782 319 224 0 0 chr15 25865503 25865561 -77629413 + Lx9 LINE L1 7059 7116 -528 7 782 823 216 161 18 chr15 25865564 25865748 -77629226 + Lx9 LINE L1 7298 7515 -129 7 782 423 0 0 0 chr15 25865748 25865795 -77629179 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 782 823 216 161 18 chr15 25865795 25865883 -77629091 + Lx9 LINE L1 7516 7608 -36 7 782 6785 61 34 8 chr15 25867361 25868243 -77626731 + L1Md_F2 LINE L1 5677 6581 -1 7 782 237 350 41 16 chr15 25868286 25868408 -77626566 + MLT1B LTR MaLR 70 194 -196 7 782 358 264 92 46 chr15 25868702 25868833 -77626141 - Tigger7 DNA MER2_type 0 2491 2355 7 782 899 276 47 36 chr15 25868865 25869166 -77625808 - Tigger7 DNA MER2_type -2009 482 179 7 782 237 214 107 0 chr15 25869384 25869440 -77625534 + U6 snRNA snRNA 31 92 -15 7 782 22 0 0 0 chr15 25869646 25869668 -77625306 + AT_rich Low_complexity Low_complexity 1 22 0 7 782 1043 58 0 7 chr15 25869873 25870013 -77624961 + (GGAA)n Simple_repeat Simple_repeat 3 141 0 7 782 315 0 0 0 chr15 25870546 25870581 -77624393 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 782 332 253 62 21 chr15 25874661 25874758 -77620216 - MER63B DNA AcHobo 0 436 336 7 782 222 254 32 0 chr15 25875653 25875716 -77619258 + (TATATG)n Simple_repeat Simple_repeat 6 70 0 7 782 1207 213 24 17 chr15 25876048 25876335 -77618639 - L1_Mur3 LINE L1 -525 5355 5067 7 782 180 125 0 0 chr15 25878563 25878595 -77616379 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 7 782 207 100 0 0 chr15 25878785 25878815 -77616159 + (ATGGTG)n Simple_repeat Simple_repeat 4 33 0 7 782 422 106 0 29 chr15 25879504 25879572 -77615402 - Lx2A LINE L1 -11 6997 6932 7 782 200 111 0 27 chr15 25880026 25880063 -77614911 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 7 782 5513 117 13 18 chr15 25880063 25880888 -77614086 - Lx4A LINE L1 0 7058 6238 7 782 281 327 56 0 chr15 25881217 25881324 -77613650 + MER58A DNA MER1_type 14 126 -98 7 782 644 370 78 28 chr15 25881489 25881925 -77613049 + MLT1J LTR MaLR 12 469 -43 7 782 228 266 0 15 chr15 25881963 25882028 -77612946 + Tigger13a DNA MER2_type 299 362 -409 7 782 360 0 0 0 chr15 25882067 25882107 -77612867 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 782 616 271 36 99 chr15 25883512 25883733 -77611241 - MTE2a LTR MaLR -172 207 1 7 782 22 70 0 0 chr15 25885351 25885394 -77609580 + AT_rich Low_complexity Low_complexity 1 43 0 7 782 504 0 0 0 chr15 25886155 25886211 -77608763 + (GGGA)n Simple_repeat Simple_repeat 4 59 0 7 782 248 286 0 0 chr15 25886211 25886274 -77608700 + (TG)n Simple_repeat Simple_repeat 1 63 0 7 782 180 293 65 26 chr15 25887259 25887336 -77607638 + MIRc SINE MIR 111 190 -78 7 782 373 36 18 18 chr15 25888217 25888273 -77606701 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 782 310 161 81 0 chr15 25888583 25888645 -77606329 - HAL1-3A_ME LINE L1 -809 2049 1983 7 782 2679 22 3 0 chr15 25888912 25889224 -77605750 - L1Md_A LINE L1 0 6582 6270 7 782 556 291 8 0 chr15 25889373 25889507 -77605467 + ID_B1 SINE B4 83 217 -7 7 782 275 49 24 0 chr15 25889508 25889549 -77605425 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 7 782 388 311 25 40 chr15 25889581 25889779 -77605195 - B3A SINE B2 -2 196 2 7 782 465 299 196 20 chr15 25889946 25890345 -77604629 - L1MEc LINE L1 -5731 669 201 7 782 264 30 0 0 chr15 25890358 25890391 -77604583 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 782 399 73 0 0 chr15 25890907 25890962 -77604012 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 7 782 972 225 55 5 chr15 25892092 25892293 -77602681 - B3 SINE B2 -5 211 1 7 782 414 0 0 0 chr15 25893017 25893063 -77601911 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 782 429 312 14 41 chr15 25893100 25893247 -77601727 + RSINE1 SINE B4 3 145 -20 7 782 277 226 139 21 chr15 25894481 25894583 -77600391 + PB1D10 SINE Alu 2 118 -31 7 782 186 43 0 0 chr15 25894671 25894694 -77600280 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 7 782 1505 63 53 0 chr15 25895632 25895838 -77599136 - L1_Mus1 LINE L1 0 6567 6351 7 782 956 269 139 50 chr15 25896782 25897443 -77597531 + L1ME1 LINE L1 5428 6165 -14 7 782 204 40 0 0 chr15 25897989 25898014 -77596960 + (TG)n Simple_repeat Simple_repeat 1 25 0 7 782 339 312 84 8 chr15 25898504 25898743 -77596231 + Lx8 LINE L1 7070 7326 -147 7 782 450 0 0 0 chr15 25898839 25898889 -77596085 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 782 259 123 17 34 chr15 25899139 25899198 -77595776 + (CATA)n Simple_repeat Simple_repeat 2 59 0 7 782 307 268 95 32 chr15 25899209 25899362 -77595612 - MER5A1 DNA MER1_type -4 162 9 7 782 405 280 44 39 chr15 25900059 25900241 -77594733 + L1MB5 LINE L1 5771 5953 -221 7 782 243 217 0 0 chr15 25900343 25900389 -77594585 + RSINE1 SINE B4 31 76 -89 7 782 994 229 67 78 chr15 25900479 25900688 -77594286 - MTEb LTR MaLR 0 379 160 7 782 1192 41 7 0 chr15 25900688 25900834 -77594140 - B1_Mus1 SINE Alu 0 148 2 7 782 994 229 67 78 chr15 25900834 25900998 -77593976 - MTEb LTR MaLR -220 159 10 7 782 195 139 0 0 chr15 25901911 25901947 -77593027 + (TTTTC)n Simple_repeat Simple_repeat 5 40 0 7 782 3461 113 63 13 chr15 25903567 25904107 -77590867 + Lx3A LINE L1 6414 6980 -1 7 782 369 140 40 61 chr15 25904589 25904688 -77590286 - Lx4B LINE L1 -15 7043 6947 7 782 296 268 35 58 chr15 25905007 25905094 -77589880 - B1F SINE Alu -25 124 40 7 782 556 294 32 18 chr15 25905619 25905837 -77589137 + RMER15 LTR ERVL 336 556 -19 7 782 479 260 0 9 chr15 25906451 25906556 -77588418 - PB1D7 SINE Alu -7 113 10 7 782 16540 76 10 56 chr15 25907029 25909024 -77585950 - L1_Mus2 LINE L1 0 6566 4573 7 782 785 64 36 0 chr15 25909024 25909134 -77585840 - MTA_Mm LTR MaLR 0 396 283 7 782 565 37 25 0 chr15 25909135 25909216 -77585758 - MT-int LTR MaLR -1015 83 1 7 782 3720 64 15 2 chr15 25909218 25909687 -77585287 - MT2C_Mm LTR ERVL 0 475 1 7 782 16540 91 17 101 chr15 25909687 25910279 -77584695 - L1_Mus2 LINE L1 -1315 4568 3965 7 782 479 56 0 14 chr15 25910279 25910352 -77584622 - MT2C_Mm LTR ERVL 0 475 404 8 782 16540 91 17 101 chr15 25910352 25911001 -77583973 - L1_Mus2 LINE L1 -1315 3964 3301 7 782 237 360 0 0 chr15 25911764 25911839 -77583135 - MER81 DNA AcHobo -5 109 35 8 782 1173 56 0 0 chr15 25911981 25912125 -77582849 + B1_Mm SINE Alu 1 144 -3 8 782 207 0 0 0 chr15 25912125 25912148 -77582826 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 8 782 336 350 159 30 chr15 25912182 25912415 -77582559 + MLT1F LTR MaLR 204 466 -82 8 782 649 252 41 11 chr15 25912510 25912739 -77582235 + Lx4B LINE L1 6763 7040 -18 8 782 1157 61 0 7 chr15 25912958 25913106 -77581868 + B1_Mus1 SINE Alu 2 148 0 8 782 342 239 164 35 chr15 25913108 25913258 -77581716 + Charlie5 DNA MER1_type 2367 2546 -78 8 782 2735 65 65 8 chr15 25913258 25913629 -77581345 - L1Md_F2 LINE L1 0 6582 6191 8 782 342 239 164 35 chr15 25913629 25913704 -77581270 + Charlie5 DNA MER1_type 2547 2620 -4 8 782 192 179 0 0 chr15 25914885 25914924 -77580050 + GA-rich Low_complexity Low_complexity 1 39 0 8 782 234 220 0 0 chr15 25915190 25915240 -77579734 + Zaphod DNA Tip100 3938 3987 -44 8 782 1153 61 0 7 chr15 25915255 25915404 -77579570 - B1_Mus1 SINE Alu 0 148 1 8 782 483 319 62 59 chr15 25915897 25916187 -77578787 - MLT1A1 LTR MaLR 0 408 118 8 782 421 322 140 14 chr15 25918165 25918530 -77576444 + L2 LINE L2 2501 2911 -508 8 782 235 310 0 0 chr15 25919173 25919231 -77575743 - MIRb SINE MIR -3 265 208 8 782 305 227 67 22 chr15 25919402 25919492 -77575482 - L1ME3A LINE L1 -233 5940 5847 8 782 842 221 40 9 chr15 25919496 25919705 -77575269 - B3 SINE B2 0 195 1 8 782 21 0 0 0 chr15 25920036 25920057 -77574917 + AT_rich Low_complexity Low_complexity 1 21 0 8 782 25 0 0 0 chr15 25920191 25920216 -77574758 + AT_rich Low_complexity Low_complexity 1 25 0 8 782 779 287 42 19 chr15 25920265 25920528 -77574446 - B4A SINE B4 -18 274 6 8 782 250 306 93 59 chr15 25920603 25920721 -77574253 - MER3 DNA MER1_type 0 209 88 8 782 781 114 8 0 chr15 25920885 25921008 -77573966 - B1_Mus1 SINE Alu -22 126 3 8 782 261 0 0 0 chr15 25921427 25921456 -77573518 + (TG)n Simple_repeat Simple_repeat 1 29 0 8 782 27 0 0 0 chr15 25921580 25921607 -77573367 + AT_rich Low_complexity Low_complexity 1 27 0 8 782 630 281 42 13 chr15 25922510 25922748 -77572226 - L1MA5 LINE L1 -3 6297 6053 8 782 239 271 0 41 chr15 25924443 25924516 -77570458 - MER5A1 DNA MER1_type -96 70 1 8 782 314 239 89 82 chr15 25924633 25924779 -77570195 - MER58B DNA MER1_type -16 325 179 8 782 342 281 114 36 chr15 25924998 25925138 -77569836 - RSINE1 SINE B4 -7 158 8 8 782 449 296 63 11 chr15 25925385 25925559 -77569415 - MER20 DNA MER1_type -36 183 1 8 782 33 25 0 0 chr15 25928646 25928686 -77566288 + AT_rich Low_complexity Low_complexity 1 40 0 8 782 1700 101 19 11 chr15 25928789 25929049 -77565925 + L1Md_F2 LINE L1 6321 6582 0 8 782 414 57 0 0 chr15 25929896 25929949 -77565025 + (TATG)n Simple_repeat Simple_repeat 2 54 0 8 782 1282 211 141 3 chr15 25929955 25930274 -77564700 - MTD LTR MaLR -56 363 1 8 782 367 323 24 72 chr15 25930275 25930442 -77564532 + MTE-int LTR MaLR 904 1062 -447 8 782 349 325 90 24 chr15 25930547 25930802 -77564172 + MLT1G3 LTR MaLR 104 375 -220 8 782 306 0 0 0 chr15 25931438 25931472 -77563502 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 782 891 228 10 45 chr15 25931478 25931676 -77563298 - B3 SINE B2 -24 192 2 8 782 321 89 0 0 chr15 25931810 25931855 -77563119 + (TTTC)n Simple_repeat Simple_repeat 2 46 0 8 782 1194 48 7 0 chr15 25931855 25932001 -77562973 - B1_Mm SINE Alu 0 147 1 8 782 816 224 44 6 chr15 25932041 25932221 -77562753 + B3 SINE B2 6 192 -24 8 782 337 22 0 0 chr15 25932489 25932534 -77562440 - PB1D9 SINE Alu -74 46 2 8 782 893 130 0 0 chr15 25932500 25932646 -77562328 + B1_Mus2 SINE Alu 2 147 0 8 782 24 53 0 0 chr15 25933157 25933195 -77561779 + AT_rich Low_complexity Low_complexity 1 38 0 8 782 665 276 69 0 chr15 25933197 25933400 -77561574 + ID_B1 SINE B4 2 218 -6 8 782 335 270 167 7 chr15 25933492 25933630 -77561344 - MLT1A0 LTR MaLR 0 365 206 8 782 273 215 102 30 chr15 25933728 25933811 -77561163 - MLT1A0 LTR MaLR -316 92 1 8 782 1357 337 114 45 chr15 25933892 25934856 -77560118 - MLT1A1-int LTR MaLR -487 1248 218 8 782 373 223 105 18 chr15 25934871 25934985 -77559989 - MLT1A1-int LTR MaLR -1584 151 28 8 782 345 247 51 10 chr15 25935017 25935115 -77559859 - MLT1A1 LTR MaLR 0 408 307 8 782 292 314 17 6 chr15 25935189 25935318 -77559656 + PB1D9 SINE Alu 13 146 -2 8 782 225 300 17 0 chr15 25935328 25935388 -77559586 + GA-rich Low_complexity Low_complexity 2 62 0 8 782 656 282 55 55 chr15 25935469 25935743 -77559231 + B4 SINE B4 3 276 -16 8 782 498 324 22 78 chr15 25935910 25936181 -77558793 - Charlie1b DNA MER1_type -267 256 1 8 782 1331 166 0 12 chr15 25936850 25937094 -77557880 - Lx LINE L1 0 6654 6414 8 782 292 377 49 12 chr15 25937941 25938105 -77556869 + LTR16A LTR ERVL 271 440 -11 8 782 324 295 32 0 chr15 25938401 25938496 -77556478 + HERV16-int LTR ERVL 332 429 -4567 8 782 289 377 51 25 chr15 25938812 25939008 -77555966 + MER58A DNA MER1_type 20 220 -4 8 782 510 215 246 5 chr15 25939698 25939885 -77555089 - Tigger7 DNA MER2_type -128 2363 2132 8 782 263 224 0 17 chr15 25939960 25940019 -77554955 + MTEa LTR MaLR 320 377 -2 8 782 267 333 67 20 chr15 25940054 25940204 -77554770 + HERV16-int LTR ERVL 1741 1897 -3099 8 782 312 356 70 21 chr15 25940372 25940656 -77554318 + HERV16-int LTR ERVL 2094 2391 -2605 8 782 384 171 37 0 chr15 25940661 25940743 -77554231 + Lx7 LINE L1 7612 7696 0 8 782 2225 162 63 2 chr15 25941377 25941774 -77553200 + MTC LTR MaLR 1 421 0 8 782 258 105 0 0 chr15 25941817 25941855 -77553119 + (CAA)n Simple_repeat Simple_repeat 2 39 0 8 782 397 288 23 15 chr15 25942321 25942464 -77552510 + B1F SINE Alu 6 149 0 8 782 232 281 56 0 chr15 25942755 25942844 -77552130 + LTR16A LTR ERVL 239 332 -119 8 782 919 170 0 0 chr15 25943856 25944003 -77550971 - B1_Mur3 SINE Alu 0 149 3 8 782 240 245 0 0 chr15 25944175 25944281 -77550693 + (CA)n Simple_repeat Simple_repeat 1 106 0 8 782 243 61 0 0 chr15 25944366 25944399 -77550575 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 782 181 153 55 14 chr15 25944399 25944459 -77550515 + (TA)n Simple_repeat Simple_repeat 1 64 0 8 782 189 0 0 0 chr15 25944459 25944480 -77550494 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 782 181 153 55 14 chr15 25944480 25944492 -77550482 + (TA)n Simple_repeat Simple_repeat 1 12 0 8 782 363 44 0 0 chr15 25944788 25944833 -77550141 + (CAA)n Simple_repeat Simple_repeat 2 46 0 8 782 21 0 0 0 chr15 25945079 25945100 -77549874 + AT_rich Low_complexity Low_complexity 1 21 0 8 782 241 226 32 0 chr15 25945322 25945384 -77549590 - L1MC4 LINE L1 -1029 7013 6950 8 782 410 53 18 0 chr15 25945384 25945441 -77549533 + (TCTA)n Simple_repeat Simple_repeat 2 59 0 8 782 198 0 0 0 chr15 25946020 25946042 -77548932 + (T)n Simple_repeat Simple_repeat 1 22 0 8 782 753 156 39 82 chr15 25946906 25946949 -77548025 - Lx2B LINE L1 -10 6990 6958 8 782 2969 69 0 10 chr15 25946949 25947345 -77547629 - Lx3_Mus LINE L1 0 7009 6618 8 782 753 156 39 82 chr15 25947345 25947483 -77547491 - Lx2B LINE L1 -43 6957 6817 8 782 978 72 41 48 chr15 25947581 25947726 -77547248 + B1_Mus1 SINE Alu 3 146 -2 8 782 751 249 124 19 chr15 25948043 25948301 -77546673 - MLT2D LTR ERVL -129 285 1 8 782 804 239 68 26 chr15 25948913 25949166 -77545808 + ORR1D2 LTR MaLR 63 345 -25 8 782 255 246 75 83 chr15 25949344 25949477 -77545497 + RLTR20A LTR ERVK 90 221 -320 8 782 1128 236 144 65 chr15 25949683 25950217 -77544757 - RMER4B LTR ERVK -9 576 1 8 782 1191 48 0 0 chr15 25950244 25950390 -77544584 + B1_Mus2 SINE Alu 2 147 0 8 782 180 0 0 0 chr15 25950390 25950410 -77544564 + (A)n Simple_repeat Simple_repeat 1 20 0 8 782 266 291 51 0 chr15 25950460 25950539 -77544435 - L1MC LINE L1 -2047 5835 5753 8 782 1114 248 66 4 chr15 25950622 25950893 -77544081 - B4A SINE B4 -4 288 1 8 783 21 0 0 0 chr15 25953374 25953395 -77541579 + AT_rich Low_complexity Low_complexity 1 21 0 8 783 281 313 104 98 chr15 25953629 25953792 -77541182 - RSINE1 SINE B4 0 165 2 8 783 198 0 0 0 chr15 25953875 25953897 -77541077 + (TCTG)n Simple_repeat Simple_repeat 2 23 0 8 783 811 278 24 62 chr15 25953955 25954243 -77540731 - B4A SINE B4 -14 278 2 8 783 223 312 37 81 chr15 25954970 25955106 -77539868 + ID_B1 SINE B4 94 223 -1 8 783 498 188 14 68 chr15 25955668 25955816 -77539158 - Lx9 LINE L1 -1 7643 7504 8 783 563 329 141 19 chr15 25956108 25956585 -77538389 + MER90a LTR ERV1 6 540 -74 8 783 2233 84 62 0 chr15 25956991 25957299 -77537675 - ORR1A2 LTR MaLR 0 327 1 8 783 650 306 113 27 chr15 25957363 25957699 -77537275 - MTEa LTR MaLR -9 370 6 8 783 638 269 134 38 chr15 25958310 25958630 -77536344 + MTD LTR MaLR 1 351 -68 8 783 1489 204 58 52 chr15 25959314 25959696 -77535278 - ORR1C2 LTR MaLR 0 384 1 8 783 21 0 0 0 chr15 25959696 25959717 -77535257 + AT_rich Low_complexity Low_complexity 1 21 0 8 783 312 295 44 9 chr15 25959854 25959967 -77535007 - MLT1A LTR MaLR -15 359 243 8 783 4127 86 94 13 chr15 25959967 25960582 -77534392 + L1_Mus3 LINE L1 5974 6638 0 8 783 1282 147 9 4 chr15 25960612 25960837 -77534137 + MTC LTR MaLR 196 421 0 8 783 248 182 0 52 chr15 25960847 25960905 -77534069 - MLT1A LTR MaLR -301 73 19 8 783 213 315 72 134 chr15 25960914 25961123 -77533851 - MIR SINE MIR -64 198 3 8 783 420 274 56 25 chr15 25962178 25962339 -77532635 + MLT1B LTR MaLR 207 372 -18 8 783 259 227 15 15 chr15 25962457 25962524 -77532450 - PB1D10 SINE Alu -3 114 48 9 783 2421 151 62 0 chr15 25962630 25963020 -77531954 + MTC LTR MaLR 5 418 -3 9 783 3132 177 50 58 chr15 25963022 25964142 -77530832 + MTC-int LTR MaLR 1 1227 -31 9 783 832 225 91 36 chr15 25964179 25964400 -77530574 - MTEa LTR MaLR -125 254 22 9 783 1248 122 142 0 chr15 25964716 25964913 -77530061 - URR1A DNA MER1_type 0 226 2 9 783 273 29 0 0 chr15 25965369 25965403 -77529571 + (TG)n Simple_repeat Simple_repeat 2 35 0 9 783 492 159 0 21 chr15 25965429 25965525 -77529449 + MTC-int LTR MaLR 497 590 -668 9 783 339 297 53 23 chr15 25967293 25967424 -77527550 - MLT1A1 LTR MaLR -16 392 258 9 783 549 242 53 24 chr15 25967930 25968099 -77526875 - MLT1A1 LTR MaLR -230 178 5 9 783 380 295 71 33 chr15 25968693 25968875 -77526099 - ORR1E LTR MaLR -170 189 1 9 783 22 0 0 0 chr15 25969054 25969076 -77525898 + AT_rich Low_complexity Low_complexity 1 22 0 9 783 218 250 0 0 chr15 25969105 25969157 -77525817 - PB1D10 SINE Alu -17 100 49 9 783 198 162 0 0 chr15 25969920 25969957 -77525017 + L2c LINE L2 3350 3386 -1 9 783 188 0 0 69 chr15 25970289 25970318 -77524656 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 9 783 651 145 206 6 chr15 25970334 25970494 -77524480 + RMER4B LTR ERVK 55 246 -339 9 783 374 269 44 91 chr15 25970538 25970796 -77524178 + RMER4B LTR ERVK 375 601 -10 9 783 768 266 77 24 chr15 25971434 25971681 -77523293 - Lx8 LINE L1 -326 7147 6888 9 783 676 143 8 8 chr15 25971811 25971938 -77523036 + CT-rich Low_complexity Low_complexity 1 127 0 9 783 246 279 94 47 chr15 25972163 25972193 -77522781 - L1_Rod LINE L1 -6478 694 660 9 783 180 0 0 0 chr15 25972193 25972213 -77522761 + (TTA)n Simple_repeat Simple_repeat 2 21 0 9 783 246 279 94 47 chr15 25972213 25972374 -77522600 - L1_Rod LINE L1 -6513 659 494 9 783 21 0 0 0 chr15 25972685 25972706 -77522268 + AT_rich Low_complexity Low_complexity 1 21 0 9 783 243 200 16 62 chr15 25973567 25973631 -77521343 + MLT2D LTR ERVL 3 63 -351 9 783 227 265 0 0 chr15 25973658 25973707 -77521267 + CT-rich Low_complexity Low_complexity 2 50 0 9 783 685 305 50 23 chr15 25973710 25973972 -77521002 + MLT2D LTR ERVL 91 359 -55 9 783 419 196 29 58 chr15 25974222 25974325 -77520649 - L1MA6 LINE L1 -436 5864 5765 9 783 400 225 60 87 chr15 25974413 25974598 -77520376 + L1MA7 LINE L1 6081 6260 -31 9 783 778 295 75 14 chr15 25974613 25974895 -77520079 - MER2 DNA MER2_type -15 330 32 9 783 2296 133 37 22 chr15 25976975 25977382 -77517592 + MTC LTR MaLR 1 413 -8 9 783 5793 163 109 19 chr15 25977387 25978539 -77516435 + MTC-int LTR MaLR 2 1257 -1 9 783 636 163 282 1 chr15 25978555 25978739 -77516235 + MTC LTR MaLR 33 265 -154 9 783 351 321 14 0 chr15 25978954 25979094 -77515880 + (TATATG)n Simple_repeat Simple_repeat 5 146 0 9 783 405 0 0 0 chr15 25979418 25979463 -77515511 + (TTA)n Simple_repeat Simple_repeat 2 46 0 9 783 735 212 0 0 chr15 25979464 25979601 -77515373 - B1_Mur2 SINE Alu -11 138 2 9 783 253 214 0 0 chr15 25979639 25979695 -77515279 - Tigger1 DNA MER2_type -898 1520 1465 9 783 360 0 0 0 chr15 25979813 25979853 -77515121 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 783 2515 179 20 42 chr15 25979940 25980493 -77514481 - RLTR20A LTR ERVK 0 541 1 9 783 401 171 0 0 chr15 25980494 25980564 -77514410 - B3A SINE B2 -127 71 2 9 783 327 269 0 0 chr15 25983868 25983987 -77510987 + CT-rich Low_complexity Low_complexity 2 120 0 9 783 673 221 107 65 chr15 25984594 25984650 -77510324 - RLTR25B LTR ERVK 0 1028 977 9 783 2676 113 139 0 chr15 25984650 25985117 -77509857 - RLTR47_MM LTR ERV1 0 532 1 9 783 673 221 107 65 chr15 25985117 25985321 -77509653 - RLTR25B LTR ERVK -52 976 757 9 783 3737 180 48 62 chr15 25985507 25986379 -77508595 - RLTR25A LTR ERVK -243 860 1 9 783 252 324 0 0 chr15 25986471 25986539 -77508435 + (TATG)n Simple_repeat Simple_repeat 1 68 0 9 783 180 0 0 0 chr15 25987588 25987608 -77507366 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 9 783 306 330 9 36 chr15 25987620 25987730 -77507244 - ID_B1 SINE B4 -31 193 87 9 783 934 296 30 0 chr15 25987821 25988125 -77506849 - MLT1B LTR MaLR -71 319 7 9 783 330 186 41 31 chr15 25988340 25988444 -77506530 + RMER1B Other Other 396 452 -614 9 783 228 206 29 73 chr15 25988448 25988516 -77506458 + RMER1A Other Other 216 280 -750 9 783 336 24 0 0 chr15 25988747 25988788 -77506186 + (CA)n Simple_repeat Simple_repeat 1 41 0 9 783 341 306 55 42 chr15 25989692 25990016 -77504958 + MER34-int LTR ERV1 4671 4854 -3353 9 783 320 339 62 42 chr15 25990392 25990700 -77504274 + MER34-int LTR ERV1 5714 6027 -1064 9 783 1035 317 49 66 chr15 25991016 25991654 -77503320 + RodERV21-int LTR ERV1 2925 3551 -1440 9 783 1361 255 26 16 chr15 25991661 25992039 -77502935 + RodERV21-int LTR ERV1 4412 4793 -198 9 783 539 0 30 0 chr15 25992381 25992447 -77502527 + (TCTA)n Simple_repeat Simple_repeat 4 71 0 9 783 2295 271 88 10 chr15 25992621 25993293 -77501681 + Lx8 LINE L1 6387 7110 -363 9 783 33 43 0 0 chr15 25993432 25993479 -77501495 + AT_rich Low_complexity Low_complexity 1 47 0 9 783 231 215 15 15 chr15 25993999 25994065 -77500909 - Lx7 LINE L1 -18 7678 7613 9 783 404 232 0 78 chr15 25994160 25994263 -77500711 + Lx7 LINE L1 6166 6260 -1436 9 783 1725 117 47 7 chr15 25994265 25994541 -77500433 - Lx LINE L1 0 6654 6368 9 783 402 154 63 16 chr15 25994561 25994655 -77500319 - PB1D9 SINE Alu -49 98 2 9 783 665 257 99 66 chr15 25994926 25995259 -77499715 + ORR1E LTR MaLR 1 344 -15 9 783 606 265 14 0 chr15 25995418 25995565 -77499409 - B1_Mur1 SINE Alu 0 149 1 9 783 356 326 88 61 chr15 25996324 25996585 -77498389 + B4A SINE B4 7 274 -18 9 783 208 305 11 68 chr15 25997026 25997114 -77497860 + L2c LINE L2 3077 3159 -228 9 783 260 381 0 19 chr15 25997570 25997677 -77497297 - PB1D10 SINE Alu -8 109 5 9 783 231 44 67 0 chr15 25997677 25997722 -77497252 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 9 783 960 306 136 10 chr15 25997747 25998233 -77496741 + MLT1F LTR MaLR 2 548 0 9 783 295 227 10 10 chr15 25998476 25998574 -77496400 + CT-rich Low_complexity Low_complexity 3 100 0 9 783 903 153 227 0 chr15 25998589 25998765 -77496209 - B3 SINE B2 0 216 1 9 783 837 234 140 44 chr15 25998899 25999220 -77495754 - ORR1E LTR MaLR -5 354 3 9 783 409 317 45 97 chr15 26000295 26000585 -77494389 + ORR1D2 LTR MaLR 86 360 -10 1 783 2601 59 15 61 chr15 26001454 26001797 -77493177 + ORR1A2 LTR MaLR 1 327 0 2 783 816 266 27 19 chr15 26001851 26002108 -77492866 + L1MA7 LINE L1 6000 6258 -33 3 783 415 285 116 16 chr15 26002115 26002304 -77492670 - Charlie1a DNA MER1_type -231 1224 1017 4 783 364 230 15 53 chr15 26002380 26002513 -77492461 - Lx4B LINE L1 -6 7052 6925 5 783 1003 299 102 19 chr15 26002631 26003102 -77491872 - Charlie1a DNA MER1_type -434 1021 512 4 783 201 195 0 0 chr15 26003129 26003170 -77491804 + GA-rich Low_complexity Low_complexity 3 43 0 6 783 389 354 0 0 chr15 26003189 26003302 -77491672 - PB1D10 SINE Alu 0 117 5 7 783 940 276 11 33 chr15 26003307 26003580 -77491394 - Charlie1a DNA MER1_type -996 459 193 4 783 297 314 83 6 chr15 26003636 26003793 -77491181 - MER34 LTR ERV1 -65 477 309 8 783 235 262 0 0 chr15 26004076 26004137 -77490837 - MTEa LTR MaLR -3 376 316 9 783 539 290 32 19 chr15 26004141 26004299 -77490675 + B3A SINE B2 1 160 -38 1 783 432 0 0 0 chr15 26004304 26004352 -77490622 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 783 1164 284 49 21 chr15 26004358 26004646 -77490328 - MTEa LTR MaLR -52 327 32 9 783 357 314 78 7 chr15 26004664 26004818 -77490156 - Charlie1a DNA MER1_type -1285 170 6 4 783 1082 295 38 71 chr15 26005374 26005742 -77489232 - ORR1E LTR MaLR -2 357 2 1 783 189 0 0 0 chr15 26006191 26006212 -77488762 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 783 315 0 0 0 chr15 26007233 26007268 -77487706 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 783 463 326 37 42 chr15 26007343 26007355 -77487619 - B3 SINE B2 -19 197 187 1 783 294 106 0 0 chr15 26007355 26007402 -77487572 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 1 783 561 318 53 19 chr15 26007402 26007578 -77487396 - B3A SINE B2 -30 186 10 1 783 293 68 0 22 chr15 26007807 26007852 -77487122 + (GGGAGA)n Simple_repeat Simple_repeat 3 46 0 1 783 787 182 16 78 chr15 26007852 26008043 -77486931 - ORR1D1 LTR MaLR -193 181 3 1 783 224 283 17 0 chr15 26010173 26010233 -77484741 + ID4 SINE ID 19 79 -4 1 783 3290 12 3 0 chr15 26010978 26011323 -77483651 - ORR1A0 LTR MaLR 0 346 1 2 783 438 347 28 18 chr15 26011442 26011659 -77483315 + MIR SINE MIR 37 255 -7 2 783 675 101 25 0 chr15 26011845 26011964 -77483010 + (GA)n Simple_repeat Simple_repeat 1 122 0 2 783 243 0 0 0 chr15 26012510 26012537 -77482437 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 783 38108 61 4 2 chr15 26012552 26018705 -77476269 - L1Md_F3 LINE L1 -15 6569 233 2 783 308 307 10 19 chr15 26019537 26019640 -77475334 - L2a LINE L2 -16 3410 3309 2 783 1650 228 72 11 chr15 26020412 26020771 -77474203 - RLTR18B LTR ERVK -11 501 121 2 783 440 164 0 0 chr15 26020771 26020844 -77474130 - RLTR18B LTR ERVK -238 274 202 2 783 1140 95 0 0 chr15 26020856 26021004 -77473970 - B1_Mus1 SINE Alu 0 148 1 2 783 849 269 46 10 chr15 26021017 26021248 -77473726 - RLTR18B LTR ERVK -383 233 1 2 783 566 178 219 0 chr15 26021252 26021398 -77473576 + ORR1D1 LTR MaLR 189 366 -8 2 783 292 244 192 0 chr15 26022206 26022313 -77472661 + Lx8 LINE L1 5737 5892 -1581 3 783 915 146 123 72 chr15 26022500 26022726 -77472248 - RMER1C Other Other -13 1329 939 3 783 4230 148 53 14 chr15 26022718 26023491 -77471483 - L1_Mur3 LINE L1 -132 5748 4946 3 783 854 115 28 28 chr15 26023842 26023985 -77470989 - L1_Mur3 LINE L1 -923 4957 4815 3 783 189 74 0 0 chr15 26025039 26025066 -77469908 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 783 41 36 0 0 chr15 26025437 26025492 -77469482 + AT_rich Low_complexity Low_complexity 1 55 0 3 783 3393 244 50 37 chr15 26025552 26026823 -77468151 - Lx9 LINE L1 -1544 6100 4795 3 783 4093 235 37 156 chr15 26026858 26027719 -77467255 - Lx9 LINE L1 -2990 2857 2088 3 783 194 62 0 30 chr15 26027719 26027752 -77467222 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 3 783 4093 235 37 156 chr15 26027752 26028069 -77466905 - Lx9 LINE L1 -3760 2087 1878 3 783 1175 43 0 0 chr15 26028069 26028209 -77466765 - L1_Mus2 LINE L1 0 6566 6427 3 783 4093 240 56 96 chr15 26028209 26029445 -77465529 - Lx9 LINE L1 -3970 1877 525 3 783 258 143 0 0 chr15 26031665 26031714 -77463260 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 783 1458 278 73 36 chr15 26031720 26032213 -77462761 - Lx8 LINE L1 -143 7330 6820 3 783 440 191 194 94 chr15 26032918 26033109 -77461865 - Lx8 LINE L1 -649 6824 6615 3 783 351 298 0 0 chr15 26033373 26033457 -77461517 - B4A SINE B4 -8 284 201 4 783 330 350 99 28 chr15 26033503 26033685 -77461289 - B4A SINE B4 -95 197 3 4 783 861 273 32 5 chr15 26034641 26034858 -77460116 + ID_B1 SINE B4 2 224 0 4 783 369 0 0 0 chr15 26034897 26034938 -77460036 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 4 783 1595 62 0 0 chr15 26035889 26036081 -77458893 + L1_Mus2 LINE L1 6374 6565 -1 4 783 30 0 0 0 chr15 26036084 26036114 -77458860 + AT_rich Low_complexity Low_complexity 1 30 0 4 783 652 363 132 21 chr15 26037120 26037883 -77457091 + L2 LINE L2 1290 2137 -1282 4 783 6173 188 44 8 chr15 26038154 26039347 -77455627 - Lx3C LINE L1 -2 6974 5740 4 783 8831 141 65 17 chr15 26039352 26041163 -77453811 - Lx4B LINE L1 0 7058 5147 4 783 459 0 0 0 chr15 26041165 26041216 -77453758 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 783 6817 52 11 0 chr15 26041271 26042100 -77452874 - L1_Mus1 LINE L1 0 6567 5730 4 783 1508 141 16 0 chr15 26042100 26042283 -77452691 - Lx4B LINE L1 -745 5132 4950 4 783 241 47 23 23 chr15 26042283 26042327 -77452647 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 5 783 1508 141 16 0 chr15 26042327 26042385 -77452589 - Lx4B LINE L1 -928 4949 4888 4 783 36243 35 0 1 chr15 26042386 26048025 -77446949 + L1Md_T LINE L1 1 5589 -297 5 783 9462 7 3 0 chr15 26048025 26049015 -77445959 + L1Md_T LINE L1 5590 6582 -3 5 783 5746 134 30 22 chr15 26049015 26050009 -77444965 - Lx4B LINE L1 -978 4899 3898 4 783 16868 94 11 15 chr15 26050007 26053221 -77441753 + L1Md_F2 LINE L1 204 4196 -1687 5 783 804 21 0 0 chr15 26053221 26053315 -77441659 + (TA)n Simple_repeat Simple_repeat 1 94 0 5 783 16868 69 16 5 chr15 26053315 26054691 -77440283 + L1Md_F2 LINE L1 4197 5584 -299 5 783 7801 85 7 6 chr15 26054692 26055681 -77439293 + L1Md_F2 LINE L1 5587 6576 -6 5 783 2544 45 3 0 chr15 26055684 26055976 -77438998 + L1Md_F2 LINE L1 6288 6580 -2 5 783 4535 148 8 8 chr15 26055976 26056760 -77438214 - L1_Mur2 LINE L1 -1966 3911 3128 5 783 800 151 32 0 chr15 26056935 26057061 -77437913 + URR1B DNA MER1_type 2 131 -94 5 783 388 308 106 65 chr15 26057224 26057539 -77437435 + RMER20B LTR ERVK 163 480 -380 5 783 580 100 22 0 chr15 26057806 26057896 -77437078 + URR1B DNA MER1_type 134 225 0 5 783 785 181 89 2 chr15 26057973 26058159 -77436815 + Lx7 LINE L1 6053 6268 -1428 5 783 639 308 36 4 chr15 26058195 26058420 -77436554 + MLT1A1 LTR MaLR 177 408 0 5 783 1506 194 65 54 chr15 26058467 26058837 -77436137 - ORR1D1 LTR MaLR 0 374 1 6 783 779 303 105 37 chr15 26059432 26059639 -77435335 + LTR55 LTR ERV 1 222 -326 6 783 495 80 0 26 chr15 26059639 26059716 -77435258 + L1_Mus1 LINE L1 6493 6567 0 6 783 779 303 105 37 chr15 26059716 26059909 -77435065 + LTR55 LTR ERV 223 428 -120 6 783 2971 81 18 2 chr15 26060614 26061008 -77433966 + MTB LTR MaLR 1 400 0 6 783 1020 271 27 146 chr15 26061492 26061902 -77433072 - MTE2a LTR MaLR -18 361 1 6 783 305 309 47 8 chr15 26062154 26062281 -77432693 + MIRb SINE MIR 58 189 -79 6 783 369 0 0 0 chr15 26062326 26062367 -77432607 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 783 563 253 50 114 chr15 26063066 26063267 -77431707 + MLT1A LTR MaLR 1 188 -186 6 783 260 299 52 59 chr15 26063402 26063555 -77431419 + MLT1B LTR MaLR 5 156 -234 6 783 325 0 0 43 chr15 26063856 26063903 -77431071 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 6 783 393 22 0 0 chr15 26064188 26064234 -77430740 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 7 783 260 295 171 8 chr15 26064346 26064469 -77430505 + Charlie8 DNA MER1_type 96 238 -2190 7 783 246 208 183 61 chr15 26064567 26064649 -77430325 - MER21B LTR ERV1 -107 756 665 7 783 498 328 119 31 chr15 26064717 26065010 -77429964 - MER21B LTR ERV1 -511 352 34 7 783 228 237 32 48 chr15 26065278 26065340 -77429634 + ORR1E LTR MaLR 1 61 -298 7 783 987 260 5 0 chr15 26065506 26065706 -77429268 + B3 SINE B2 6 206 -10 7 783 295 250 53 80 chr15 26066588 26066701 -77428273 + MER34 LTR ERV1 377 501 -70 7 783 654 287 5 32 chr15 26066744 26066931 -77428043 - B3A SINE B2 -16 182 1 7 783 22 0 0 0 chr15 26067074 26067096 -77427878 + AT_rich Low_complexity Low_complexity 1 22 0 7 783 287 383 36 40 chr15 26067442 26067665 -77427309 + MIRb SINE MIR 17 238 -30 7 783 294 262 35 70 chr15 26068219 26068334 -77426640 - MTEb LTR MaLR -23 356 246 8 783 251 323 73 0 chr15 26068398 26068494 -77426480 - MTEb LTR MaLR -253 121 19 8 783 2786 348 83 41 chr15 26068488 26068662 -77426312 - MTEb-int LTR MaLR -28 1552 1362 8 783 303 85 0 0 chr15 26068662 26068709 -77426265 + (CCAA)n Simple_repeat Simple_repeat 2 48 0 8 783 2786 348 83 42 chr15 26068709 26070015 -77424959 - MTEb-int LTR MaLR -219 1361 2 8 783 557 273 244 13 chr15 26070018 26070326 -77424648 - MTEb LTR MaLR 0 379 1 8 783 3013 206 27 12 chr15 26070939 26071767 -77423207 + Lx4B LINE L1 6110 6969 -31 8 783 294 29 0 0 chr15 26071767 26071802 -77423172 + (CTAA)n Simple_repeat Simple_repeat 2 36 0 8 783 278 261 43 11 chr15 26072038 26072131 -77422843 - MLT1E2 LTR MaLR -377 250 155 8 783 425 18 0 34 chr15 26072532 26072591 -77422383 + (TCTCTG)n Simple_repeat Simple_repeat 3 59 0 8 783 489 34 0 0 chr15 26072596 26072655 -77422319 + (CCA)n Simple_repeat Simple_repeat 1 59 0 8 783 276 308 0 0 chr15 26072739 26072830 -77422144 - Lx7 LINE L1 -388 7308 7218 8 783 852 318 52 22 chr15 26073784 26074147 -77420827 - MLT1A LTR MaLR 0 374 1 8 783 1402 62 17 0 chr15 26074491 26074669 -77420305 - B2_Mm2 SINE B2 -14 181 1 8 783 1356 286 80 46 chr15 26074932 26075697 -77419277 - L1MC1 LINE L1 -27 6481 5691 9 783 1175 262 66 66 chr15 26076028 26076616 -77418358 + L1_Rod LINE L1 903 1487 -4360 9 783 5069 108 22 11 chr15 26076616 26077374 -77417600 - Lx LINE L1 -7 6647 5881 9 783 1175 225 27 116 chr15 26077374 26077603 -77417371 + L1_Rod LINE L1 1488 1715 -4132 9 783 727 183 6 6 chr15 26077628 26077804 -77417170 + (TCTA)n Simple_repeat Simple_repeat 3 178 0 9 783 183 80 0 0 chr15 26077840 26077865 -77417109 + (CAA)n Simple_repeat Simple_repeat 1 25 0 9 783 4059 267 131 41 chr15 26077916 26079246 -77415728 - L1MC1 LINE L1 -942 5379 3973 9 783 1117 74 0 20 chr15 26079246 26079397 -77415577 - B1_Mus1 SINE Alu 0 148 1 9 783 216 0 0 0 chr15 26079402 26079426 -77415548 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 9 783 4059 262 139 39 chr15 26079426 26081148 -77413826 - L1MC1 LINE L1 -2349 3972 2024 9 783 891 273 39 14 chr15 26081789 26082071 -77412903 + B4A SINE B4 3 291 -1 9 784 734 307 82 9 chr15 26083829 26084062 -77410912 + B4A SINE B4 28 277 -15 9 784 856 79 0 14 chr15 26084114 26084255 -77410719 + (CA)n Simple_repeat Simple_repeat 2 140 0 9 784 1906 70 66 10 chr15 26084749 26085037 -77409937 - Lx2 LINE L1 0 6997 6694 1 784 266 106 21 0 chr15 26085572 26085619 -77409355 + (TTATA)n Simple_repeat Simple_repeat 5 52 0 1 784 385 298 141 39 chr15 26085864 26086536 -77408438 - L1M3 LINE L1 -690 5622 4877 1 784 359 291 246 22 chr15 26089040 26089219 -77405755 + MER20 DNA MER1_type 1 219 0 1 784 446 327 53 38 chr15 26090122 26090386 -77404588 - Lx8 LINE L1 -10 7463 7196 1 784 327 345 38 33 chr15 26090853 26091036 -77403938 - LTR79 LTR ERVL -19 508 325 1 784 227 313 76 34 chr15 26091799 26091918 -77403056 + MER94 DNA AcHobo 2 125 -9 1 784 447 19 0 0 chr15 26093169 26093221 -77401753 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 784 405 0 0 0 chr15 26093221 26093265 -77401709 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 784 1610 154 29 114 chr15 26093304 26093655 -77401319 - ORR1A4 LTR MaLR -8 321 1 1 784 2440 173 33 63 chr15 26093655 26094166 -77400808 - ORR1A4-int LTR MaLR 0 1509 1014 1 784 2040 156 125 0 chr15 26094150 26094573 -77400401 - ORR1A4-int LTR MaLR -770 1193 718 1 784 753 232 0 0 chr15 26095425 26095619 -77399355 + L1_Mur3 LINE L1 5306 5500 -380 1 784 516 378 51 25 chr15 26096351 26096625 -77398349 - MamSINE1 SINE tRNA 0 290 10 1 784 333 47 0 0 chr15 26097090 26097133 -77397841 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 1 784 472 301 51 23 chr15 26097964 26098141 -77396833 - RMER15 LTR ERVL -47 528 347 1 784 521 292 58 0 chr15 26099118 26099255 -77395719 + RSINE1 SINE B4 3 147 -18 1 784 270 0 0 0 chr15 26099262 26099292 -77395682 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 784 10433 15 2 0 chr15 26099524 26101473 -77393501 - L1Md_A LINE L1 0 6582 4630 1 784 38462 18 1 6 chr15 26101451 26107832 -77387142 - L1Md_A LINE L1 0 6582 235 1 784 784 345 44 35 chr15 26108231 26109008 -77385966 + L1M2 LINE L1 2203 2986 -3157 1 784 467 227 16 33 chr15 26109019 26109157 -77385817 + L1_Mur3 LINE L1 262 378 -7334 1 784 610 251 126 75 chr15 26109157 26109452 -77385522 - RLTR11A2 LTR ERVK -199 329 1 1 784 794 213 72 0 chr15 26109452 26109659 -77385315 + L1_Mur3 LINE L1 926 1147 -6565 1 784 1177 89 72 0 chr15 26109675 26109855 -77385119 + Lx2 LINE L1 6296 6488 -509 1 784 2669 51 0 6 chr15 26109855 26110189 -77384785 - IAPEY3_LTR LTR ERVK 0 332 1 1 784 1702 98 56 11 chr15 26110214 26110483 -77384491 + Lx2 LINE L1 6544 6824 -173 1 784 274 274 278 19 chr15 26110484 26110592 -77384382 + RSINE1 SINE B4 13 148 -17 1 784 270 0 0 0 chr15 26110594 26110624 -77384350 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 784 231 269 0 0 chr15 26110634 26110686 -77384288 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 784 284 255 165 3 chr15 26110962 26111076 -77383898 + L2a LINE L2 3244 3421 -5 1 784 258 273 17 52 chr15 26112113 26112229 -77382745 - Lx8 LINE L1 -5 7468 7357 1 784 519 246 0 119 chr15 26112244 26112378 -77382596 - B1F2 SINE Alu 0 120 3 1 784 882 322 92 11 chr15 26112383 26112848 -77382126 - Lx8 LINE L1 -134 7339 6837 1 784 356 279 164 30 chr15 26112855 26113117 -77381857 - Lx7 LINE L1 -1890 5806 5509 1 784 924 308 89 41 chr15 26113128 26113204 -77381770 + L1_Rod LINE L1 4647 4720 -1127 1 784 426 20 0 0 chr15 26113204 26113255 -77381719 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 784 924 308 89 41 chr15 26113255 26113967 -77381007 + L1_Rod LINE L1 4721 5473 -374 1 784 275 0 29 0 chr15 26114813 26114848 -77380126 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 784 400 254 65 41 chr15 26114886 26115009 -77379965 - RSINE1 SINE B4 -37 128 3 1 784 881 286 40 4 chr15 26115009 26115230 -77379744 - B4A SINE B4 -62 230 2 1 784 969 293 39 7 chr15 26115449 26115731 -77379243 + Lx8 LINE L1 7041 7331 -142 1 784 31272 83 30 5 chr15 26117228 26123082 -77371892 + Lx3_Mus LINE L1 911 7001 -8 1 784 26 30 0 0 chr15 26123082 26123115 -77371859 + AT_rich Low_complexity Low_complexity 1 33 0 1 784 271 312 97 0 chr15 26123274 26123418 -77371556 + L1MC3 LINE L1 6687 6844 -941 1 784 242 242 61 0 chr15 26123812 26123878 -77371096 + L1MC3 LINE L1 7035 7104 -681 1 784 262 229 23 35 chr15 26124097 26124183 -77370791 - RMER1C Other Other -18 1324 1240 1 784 637 299 52 5 chr15 26124203 26124415 -77370559 - Lx8 LINE L1 -200 7273 7052 1 784 293 270 114 7 chr15 26124497 26124646 -77370328 + L1MC3 LINE L1 7363 7527 -258 1 784 246 358 59 42 chr15 26125083 26125322 -77369652 + MARNA DNA Mariner 255 497 -89 1 784 628 292 44 22 chr15 26126735 26126917 -77368057 + ORR1D2 LTR MaLR 1 186 -184 1 784 3192 74 0 2 chr15 26126947 26127355 -77367619 - MTB_Mm LTR MaLR 0 407 1 1 784 34 0 0 0 chr15 26127598 26127632 -77367342 + AT_rich Low_complexity Low_complexity 1 34 0 1 784 2050 225 88 101 chr15 26127658 26128430 -77366544 - Lx9 LINE L1 -6 7638 6877 1 784 800 254 67 5 chr15 26128542 26128736 -77366238 - B3 SINE B2 -10 206 1 1 784 2555 308 68 10 chr15 26128743 26129112 -77365862 - Lx8 LINE L1 -122 7351 6944 1 784 210 71 0 0 chr15 26129112 26129140 -77365834 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 784 2555 308 68 10 chr15 26129140 26129778 -77365196 - Lx8 LINE L1 -530 6943 6286 1 784 303 261 43 0 chr15 26130416 26130554 -77364420 - MER33 DNA MER1_type -46 278 135 1 784 21 0 0 0 chr15 26130593 26130614 -77364360 + AT_rich Low_complexity Low_complexity 1 21 0 1 784 207 319 15 105 chr15 26131010 26131143 -77363831 + L2 LINE L2 1320 1440 -1979 1 784 520 376 50 11 chr15 26131239 26131696 -77363278 + L2 LINE L2 1636 2110 -1309 1 784 339 25 0 0 chr15 26131762 26131802 -77363172 + (CCA)n Simple_repeat Simple_repeat 1 40 0 1 784 1064 297 13 43 chr15 26132262 26132644 -77362330 - Lx9 LINE L1 -931 6713 6343 1 784 494 31 0 15 chr15 26132644 26132709 -77362265 + (TA)n Simple_repeat Simple_repeat 1 64 0 1 784 1064 297 13 43 chr15 26132709 26132723 -77362251 - Lx9 LINE L1 -1302 6342 6329 1 784 1856 195 102 0 chr15 26133076 26133450 -77361524 - MTC LTR MaLR 0 421 10 1 784 25 0 0 0 chr15 26134448 26134473 -77360501 + AT_rich Low_complexity Low_complexity 1 25 0 1 784 425 232 27 0 chr15 26135471 26135583 -77359391 + Lx9 LINE L1 7294 7408 -236 1 784 387 149 0 0 chr15 26136259 26136333 -77358641 + (GA)n Simple_repeat Simple_repeat 1 74 0 1 784 514 53 13 0 chr15 26137065 26137141 -77357833 + L1_Mus2 LINE L1 6490 6566 0 1 784 269 228 180 8 chr15 26137391 26137519 -77357455 - L1M3 LINE L1 -720 5448 5299 1 784 655 289 74 28 chr15 26137558 26137921 -77357053 + L1MA5A LINE L1 5553 5932 -365 1 784 443 294 35 76 chr15 26138846 26139188 -77355786 - L1MA5 LINE L1 -398 5902 5575 1 784 246 331 91 0 chr15 26139757 26139878 -77355096 - Charlie13b DNA Charlie -137 375 244 1 784 1233 41 0 0 chr15 26140817 26140963 -77354011 - B1_Mm SINE Alu 0 147 2 1 784 271 41 0 0 chr15 26141586 26141635 -77353339 + L1Md_F2 LINE L1 6534 6582 0 1 784 331 324 117 18 chr15 26142153 26142376 -77352598 + MLT1C LTR MaLR 38 282 -185 1 784 757 193 227 0 chr15 26142760 26142936 -77352038 + B3 SINE B2 1 216 0 1 784 287 341 179 35 chr15 26143631 26143999 -77350975 - MLT1D LTR MaLR 0 505 85 1 784 1325 182 47 14 chr15 26144148 26144426 -77350548 + RMER12 LTR ERVK 1 287 -1035 1 784 2086 137 53 0 chr15 26144435 26144772 -77350202 - L1_Mus2 LINE L1 0 6566 6212 1 784 3373 52 0 0 chr15 26144772 26145314 -77349660 + L1_Mus2 LINE L1 5423 5964 -602 1 784 868 266 106 102 chr15 26145314 26145842 -77349132 + RLTR22_Mur LTR ERVK 267 796 -1052 1 784 404 216 65 43 chr15 26145934 26146026 -77348948 + RMER12 LTR ERVK 988 1081 -241 1 784 405 0 0 0 chr15 26146031 26146076 -77348898 + (TTTC)n Simple_repeat Simple_repeat 1 45 0 1 784 826 141 13 0 chr15 26146078 26146234 -77348740 + CT-rich Low_complexity Low_complexity 1 158 0 1 784 635 223 145 35 chr15 26146234 26146245 -77348729 + RMER12 LTR ERVK 1096 1105 -217 1 784 1166 114 21 5 chr15 26146245 26146439 -77348535 - Lx LINE L1 0 6654 6458 1 784 635 223 145 35 chr15 26146439 26146627 -77348347 + RMER12 LTR ERVK 1106 1317 -5 1 784 823 195 77 6 chr15 26146972 26147142 -77347832 + ORR1D1 LTR MaLR 8 189 -185 1 784 635 102 14 42 chr15 26147145 26147288 -77347686 + (TCTCTG)n Simple_repeat Simple_repeat 4 142 0 1 784 906 202 62 48 chr15 26147293 26147501 -77347473 + ORR1D1 LTR MaLR 164 374 0 1 784 850 268 94 22 chr15 26147739 26148014 -77346960 + MER2 DNA MER2_type 14 308 -37 1 784 1110 297 107 22 chr15 26148048 26148061 -77346913 - MLT2B2 LTR ERVL -64 451 439 1 784 495 0 0 0 chr15 26148061 26148116 -77346858 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 784 1110 297 107 22 chr15 26148116 26148515 -77346459 - MLT2B2 LTR ERVL -77 438 4 1 784 471 186 0 0 chr15 26149019 26149121 -77345853 + (TG)n Simple_repeat Simple_repeat 1 102 0 1 784 746 192 5 0 chr15 26149136 26149353 -77345621 + (TG)n Simple_repeat Simple_repeat 1 218 0 1 784 235 208 0 0 chr15 26149353 26149406 -77345568 - B3A SINE B2 -15 183 131 1 784 468 323 182 22 chr15 26149373 26149604 -77345370 - B4A SINE B4 -1 291 24 1 784 21 104 0 0 chr15 26150011 26150088 -77344886 + AT_rich Low_complexity Low_complexity 1 77 0 1 784 22 35 0 0 chr15 26150218 26150247 -77344727 + AT_rich Low_complexity Low_complexity 1 29 0 1 784 334 351 58 12 chr15 26150534 26150707 -77344267 - Tigger5 DNA MER2_type -2215 191 11 1 784 4613 105 42 1 chr15 26151188 26151855 -77343119 - Lx2A1 LINE L1 -5 7003 6310 1 784 310 259 50 100 chr15 26152460 26152580 -77342394 - B3A SINE B2 -15 183 70 1 784 645 279 117 114 chr15 26152645 26153021 -77341953 + MTE2a LTR MaLR 3 379 0 1 784 455 161 12 12 chr15 26153570 26153652 -77341322 + B3 SINE B2 1 82 -134 1 784 250 151 37 19 chr15 26153864 26153918 -77341056 + 4.5SRNA scRNA scRNA 27 81 -13 1 784 803 82 0 0 chr15 26153871 26153981 -77340993 + B1_Mus1 SINE Alu 39 148 0 1 784 966 238 0 0 chr15 26154379 26154581 -77340393 + B3 SINE B2 1 202 -14 1 784 377 342 60 26 chr15 26155171 26155487 -77339487 - ORR1E LTR MaLR 0 379 20 1 784 415 322 79 35 chr15 26155488 26155855 -77339119 - LTR37B LTR ERV1 -28 440 58 1 784 374 376 38 19 chr15 26155856 26156119 -77338855 - MER99 DNA hAT? 0 831 564 1 784 1982 41 12 0 chr15 26156755 26157001 -77337973 - L1Md_F3 LINE L1 -2 6582 6334 1 784 3272 29 37 0 chr15 26157043 26157425 -77337549 + MTA_Mm LTR MaLR 1 396 0 1 784 250 375 16 8 chr15 26158087 26158208 -77336766 + MER34A LTR ERV1 4 125 -446 1 784 249 298 141 29 chr15 26158522 26158906 -77336068 - L2 LINE L2 -833 2586 2160 1 784 622 325 43 118 chr15 26158982 26159355 -77335619 + MLT1C LTR MaLR 44 388 -2 1 784 745 110 16 0 chr15 26159913 26160040 -77334934 + L1_Mus3 LINE L1 6506 6634 -4 2 784 21 36 0 0 chr15 26161389 26161417 -77333557 + AT_rich Low_complexity Low_complexity 1 28 0 2 784 395 321 10 50 chr15 26162491 26162691 -77332283 + Lx8 LINE L1 6932 7123 -350 2 784 205 328 0 15 chr15 26162691 26162759 -77332215 + GA-rich Low_complexity Low_complexity 1 67 0 2 784 1653 222 31 92 chr15 26163478 26163623 -77331351 - MTD LTR MaLR 0 419 309 2 784 5761 58 11 1 chr15 26163623 26164351 -77330623 - L1Md_F2 LINE L1 -9 6573 5839 2 784 1653 222 31 92 chr15 26164351 26164651 -77330323 - MTD LTR MaLR -111 308 1 2 784 7704 32 1 2 chr15 26164767 26166331 -77328643 - L1Md_F2 LINE L1 -3 6579 5019 2 784 558 234 13 167 chr15 26166411 26166586 -77328388 + B3A SINE B2 46 198 0 2 784 1492 280 28 6 chr15 26167077 26167436 -77327538 + MTD LTR MaLR 18 384 -35 2 784 240 35 0 0 chr15 26167648 26167677 -77327297 + (TTA)n Simple_repeat Simple_repeat 2 30 0 2 784 1007 231 91 4 chr15 26167683 26167948 -77327026 - Lx6 LINE L1 -5 7455 7168 2 784 613 256 49 24 chr15 26168885 26168977 -77325997 - RLTR20C LTR ERVK 0 578 490 2 784 521 30 15 0 chr15 26168977 26169044 -77325930 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 784 976 257 67 59 chr15 26169044 26169412 -77325562 - RLTR20C LTR ERVK -89 489 1 2 784 184 345 133 10 chr15 26169837 26170033 -77324941 - L2a LINE L2 -48 3378 3159 2 784 180 0 0 0 chr15 26170270 26170290 -77324684 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 2 784 300 344 73 8 chr15 26170777 26170900 -77324074 + MIRc SINE MIR 125 255 -13 2 784 22 35 0 0 chr15 26170932 26170961 -77324013 + AT_rich Low_complexity Low_complexity 1 29 0 2 784 36216 30 0 0 chr15 26171774 26178220 -77316754 - L1Md_T LINE L1 0 6585 43 2 784 4515 10 1 0 chr15 26178473 26179009 -77315965 - L1Md_A LINE L1 -520 6477 5597 2 784 4186 7 0 0 chr15 26179013 26179477 -77315497 + L1Md_A LINE L1 6118 6581 -1 2 784 21 0 0 0 chr15 26179533 26179554 -77315420 + AT_rich Low_complexity Low_complexity 1 21 0 2 784 279 191 0 0 chr15 26179763 26179826 -77315148 + (CAGA)n Simple_repeat Simple_repeat 2 64 0 2 784 399 21 0 0 chr15 26180050 26180098 -77314876 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 784 4468 67 5 5 chr15 26180538 26181121 -77313853 + L1_Mus3 LINE L1 6055 6637 -1 2 784 28 48 0 0 chr15 26181132 26181174 -77313800 + AT_rich Low_complexity Low_complexity 1 42 0 2 784 1607 244 34 39 chr15 26181223 26181781 -77313193 - Lx9 LINE L1 -162 7482 6928 2 784 202 203 13 63 chr15 26182058 26182137 -77312837 + (TATATG)n Simple_repeat Simple_repeat 1 75 0 2 784 699 211 0 0 chr15 26182142 26182256 -77312718 - B3A SINE B2 -84 114 1 2 784 370 250 18 48 chr15 26182533 26182701 -77312273 + L1MA4A LINE L1 5711 5873 -430 2 784 3412 136 32 13 chr15 26182824 26183381 -77311593 - Lx LINE L1 -4 6650 6083 2 784 7601 168 39 14 chr15 26183383 26184558 -77310416 + Lx LINE L1 4260 5451 -432 2 784 1145 90 0 0 chr15 26184558 26184703 -77310271 + B1_Mus1 SINE Alu 1 145 -3 2 784 486 108 0 0 chr15 26184703 26184777 -77310197 + (TAA)n Simple_repeat Simple_repeat 2 75 0 2 784 7601 116 25 3 chr15 26184777 26185367 -77309607 + Lx LINE L1 5452 6066 -588 2 784 201 231 0 0 chr15 26185487 26185526 -77309448 + CT-rich Low_complexity Low_complexity 2 40 0 2 784 645 49 0 0 chr15 26185527 26185608 -77309366 + (TC)n Simple_repeat Simple_repeat 2 82 0 2 784 277 256 108 32 chr15 26185818 26185911 -77309063 - MLT1G3 LTR MaLR -250 345 246 2 784 279 0 0 0 chr15 26186137 26186168 -77308806 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 784 540 0 0 0 chr15 26186168 26186227 -77308747 + (GA)n Simple_repeat Simple_repeat 1 60 0 2 784 12581 30 1 0 chr15 26186348 26188573 -77306401 - L1Md_T LINE L1 0 6582 4355 2 784 8076 21 0 0 chr15 26188568 26189559 -77305415 + L1Md_T LINE L1 3350 4340 -1543 2 784 243 267 121 30 chr15 26189764 26189930 -77305044 - L1MC1 LINE L1 -70 6263 6083 2 784 309 51 0 0 chr15 26189978 26190017 -77304957 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 784 2122 115 35 3 chr15 26190017 26190357 -77304617 - L1_Mus3 LINE L1 0 6638 6288 2 784 373 57 19 0 chr15 26190357 26190410 -77304564 + L1_Mus3 LINE L1 6230 6283 -353 2 784 231 365 162 6 chr15 26191074 26191234 -77303740 - MER58A DNA MER1_type 0 224 40 2 784 233 252 26 9 chr15 26191234 26191350 -77303624 + L1MA9 LINE L1 5111 5228 -912 2 784 824 285 78 22 chr15 26191384 26191832 -77303142 + L1MA9 LINE L1 5815 6287 -25 2 784 860 263 0 39 chr15 26192823 26193005 -77301969 + B3A SINE B2 8 182 -16 2 784 1119 196 32 42 chr15 26193051 26193334 -77301640 + Lx9 LINE L1 7237 7516 -128 2 784 560 166 14 21 chr15 26193375 26193517 -77301457 + Lx9 LINE L1 7503 7643 -1 2 784 255 31 0 0 chr15 26193888 26193920 -77301054 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 784 180 281 45 30 chr15 26194127 26194193 -77300781 - L3 LINE CR1 -4393 96 30 2 784 29 60 0 0 chr15 26194433 26194483 -77300491 + AT_rich Low_complexity Low_complexity 1 50 0 2 784 3201 48 8 15 chr15 26195712 26196100 -77298874 + MTB LTR MaLR 1 390 -10 2 784 1071 60 0 15 chr15 26196100 26196236 -77298738 + B1_Mm SINE Alu 1 134 -13 2 784 231 61 0 0 chr15 26196236 26196269 -77298705 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2 784 3201 48 8 15 chr15 26196269 26196280 -77298694 + MTB LTR MaLR 391 397 -3 2 784 822 21 0 0 chr15 26196620 26196716 -77298258 + (TG)n Simple_repeat Simple_repeat 1 96 0 2 784 353 22 22 0 chr15 26196838 26196884 -77298090 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2 784 219 366 35 35 chr15 26196949 26197034 -77297940 + B1F SINE Alu 7 91 -58 2 784 579 320 65 17 chr15 26197075 26197270 -77297704 + MTEb LTR MaLR 8 230 -149 2 784 2321 89 24 32 chr15 26197270 26197641 -77297333 - RLTR9A LTR ERVK 0 368 1 2 784 579 276 119 34 chr15 26197641 26197776 -77297198 + MTEb LTR MaLR 231 378 -1 2 784 502 233 148 19 chr15 26197814 26197976 -77296998 - Lx9 LINE L1 -236 7408 7226 2 784 423 172 0 44 chr15 26197973 26198064 -77296910 + Lx9 LINE L1 7393 7479 -165 2 784 278 50 50 0 chr15 26198070 26198110 -77296864 - L1_Mus2 LINE L1 -349 6217 6176 2 784 2734 72 3 22 chr15 26198112 26198482 -77296492 + L1_Mus2 LINE L1 6203 6565 -1 2 784 315 0 0 0 chr15 26198493 26198528 -77296446 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 784 531 187 8 8 chr15 26198533 26198657 -77296317 + Lx9 LINE L1 7512 7635 -9 2 784 237 151 0 0 chr15 26199344 26199397 -77295577 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 784 681 182 21 21 chr15 26201129 26201269 -77293705 + B1_Mur3 SINE Alu 1 140 -9 2 784 255 320 108 43 chr15 26201849 26202035 -77292939 + L2a LINE L2 3228 3425 -1 2 784 408 40 0 0 chr15 26204364 26204414 -77290560 + (GGGA)n Simple_repeat Simple_repeat 3 52 0 2 784 425 354 97 28 chr15 26204481 26204871 -77290103 + HAL1 LINE L1 137 553 -1954 2 784 573 350 114 29 chr15 26205910 26206044 -77288930 - MamRep137 DNA TcMar? -33 411 262 2 784 288 0 0 0 chr15 26206044 26206076 -77288898 + (TC)n Simple_repeat Simple_repeat 2 33 0 2 784 573 350 114 29 chr15 26206076 26206318 -77288656 - MamRep137 DNA TcMar? -183 261 3 2 784 1879 140 50 3 chr15 26207075 26207377 -77287597 + MTC LTR MaLR 1 316 -105 2 784 2720 81 8 20 chr15 26208984 26209377 -77285597 + L1_Mus3 LINE L1 6251 6638 0 2 12 34032 49 0 3 chr15 26209997 26215666 -77279308 + L1Md_T LINE L1 1 5589 -297 2 785 8383 37 0 0 chr15 26215666 26216662 -77278312 + L1Md_T LINE L1 5590 6585 0 2 785 21 57 0 0 chr15 26216764 26216799 -77278175 + AT_rich Low_complexity Low_complexity 1 35 0 2 785 230 374 40 16 chr15 26216860 26216985 -77277989 - MLT1H1 LTR MaLR -138 417 290 2 785 243 265 14 14 chr15 26217056 26217125 -77277849 + MER20 DNA MER1_type 1 69 -150 2 785 3106 131 217 2 chr15 26217535 26218093 -77276881 + RLTR33 LTR ERVK 1 678 0 2 785 277 245 50 50 chr15 26218211 26218310 -77276664 + L1MA9 LINE L1 6174 6272 -40 2 785 1723 157 85 38 chr15 26218347 26218520 -77276454 + ORR1C2 LTR MaLR 1 165 -219 2 785 621 38 0 0 chr15 26218520 26218600 -77276374 + (TC)n Simple_repeat Simple_repeat 2 81 0 2 785 1723 157 85 38 chr15 26218600 26218791 -77276183 + ORR1C2 LTR MaLR 166 382 -2 2 785 351 0 0 0 chr15 26218791 26218830 -77276144 + (A)n Simple_repeat Simple_repeat 1 39 0 2 785 568 271 73 72 chr15 26219349 26219724 -77275250 + MTD LTR MaLR 9 405 -14 2 785 297 303 80 10 chr15 26220503 26220603 -77274371 + PB1D7 SINE Alu 2 108 -12 2 785 759 68 198 2 chr15 26220633 26220775 -77274199 + L1_Mus2 LINE L1 6417 6584 0 2 785 806 177 89 22 chr15 26220828 26221007 -77273967 + B3 SINE B2 26 216 0 2 785 345 100 0 0 chr15 26221099 26221149 -77273825 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 785 233 329 33 73 chr15 26221250 26221401 -77273573 - MLT1N2 LTR MaLR -14 548 404 2 785 491 346 85 79 chr15 26221695 26222149 -77272825 + MLT1F2 LTR MaLR 76 649 -4 2 785 395 318 84 28 chr15 26222378 26222556 -77272418 - MER21B LTR ERV1 -128 735 548 2 785 241 290 107 29 chr15 26222671 26222774 -77272200 - MER21B LTR ERV1 -492 371 261 2 785 402 253 54 11 chr15 26222777 26222869 -77272105 - MER21B LTR ERV1 -739 124 29 2 785 305 231 54 11 chr15 26223447 26223539 -77271435 - L1M5 LINE L1 -3168 2978 2883 2 785 207 0 50 50 chr15 26224574 26224614 -77270360 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 2 785 21 82 0 0 chr15 26224717 26224766 -77270208 + AT_rich Low_complexity Low_complexity 1 49 0 2 785 456 67 0 0 chr15 26225171 26225231 -77269743 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 785 555 320 0 0 chr15 26225245 26225395 -77269579 - RSINE1 SINE B4 -13 152 3 2 785 252 0 0 0 chr15 26225518 26225546 -77269428 + (A)n Simple_repeat Simple_repeat 1 28 0 2 785 322 360 72 25 chr15 26225710 26225989 -77268985 - B4A SINE B4 0 292 1 2 785 369 0 0 0 chr15 26226199 26226240 -77268734 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 785 1349 104 38 16 chr15 26226343 26226528 -77268446 + B2_Mm2 SINE B2 2 190 -5 2 785 322 372 106 63 chr15 26227918 26228713 -77266261 - LTR78 LTR ERV1 -203 1101 273 2 785 238 243 14 41 chr15 26228765 26228838 -77266136 - L2a LINE L2 -5 3421 3351 2 785 378 339 80 22 chr15 26229146 26229372 -77265602 + MIR SINE MIR 23 261 -1 2 785 1419 232 71 12 chr15 26229764 26230104 -77264870 + ORR1D2 LTR MaLR 1 360 -10 2 785 23 0 0 0 chr15 26230285 26230308 -77264666 + AT_rich Low_complexity Low_complexity 1 23 0 2 785 258 322 124 56 chr15 26230518 26230857 -77264117 - Tigger15a DNA TcMar -192 523 162 3 785 250 145 31 46 chr15 26231272 26231337 -77263637 - RMER16-int LTR ERVK -4718 688 625 3 785 283 184 26 13 chr15 26231392 26231469 -77263505 + (TA)n Simple_repeat Simple_repeat 2 79 0 3 785 24 32 0 0 chr15 26231502 26231533 -77263441 + AT_rich Low_complexity Low_complexity 1 31 0 3 785 459 0 0 0 chr15 26231533 26231584 -77263390 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 785 417 346 8 0 chr15 26231588 26231721 -77263253 - RSINE1 SINE B4 -29 136 3 3 785 24 32 0 0 chr15 26231728 26231759 -77263215 + AT_rich Low_complexity Low_complexity 1 31 0 3 785 26 0 0 0 chr15 26232083 26232109 -77262865 + AT_rich Low_complexity Low_complexity 1 26 0 3 785 936 146 6 11 chr15 26232248 26232428 -77262546 + CT-rich Low_complexity Low_complexity 2 180 0 3 785 29 60 0 0 chr15 26232811 26232861 -77262113 + AT_rich Low_complexity Low_complexity 1 50 0 3 785 240 35 0 0 chr15 26233621 26233650 -77261324 + (ATTG)n Simple_repeat Simple_repeat 3 31 0 3 785 208 331 31 0 chr15 26233794 26233921 -77261053 + (TGGA)n Simple_repeat Simple_repeat 4 134 0 3 785 1842 147 168 25 chr15 26234295 26234616 -77260358 - ORR1B2 LTR MaLR 0 367 1 3 785 260 337 114 65 chr15 26234655 26235086 -77259888 - L2 LINE L2 -647 2772 2321 3 785 375 23 0 0 chr15 26235294 26235338 -77259636 + (TATTG)n Simple_repeat Simple_repeat 4 47 0 3 785 3558 98 4 0 chr15 26235905 26236373 -77258601 - L1_Mus4 LINE L1 -7 6629 6160 3 785 494 31 0 15 chr15 26237185 26237250 -77257724 + (TTC)n Simple_repeat Simple_repeat 2 65 0 3 785 250 254 14 27 chr15 26237307 26237380 -77257594 + CT-rich Low_complexity Low_complexity 2 73 0 3 785 417 70 0 0 chr15 26237561 26237618 -77257356 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 785 190 254 90 0 chr15 26237650 26237717 -77257257 + MIR SINE MIR 80 152 -110 3 785 259 236 11 11 chr15 26237897 26237991 -77256983 + GA-rich Low_complexity Low_complexity 2 95 0 3 785 229 268 0 14 chr15 26239440 26239512 -77255462 + (CAG)n Simple_repeat Simple_repeat 3 73 0 3 785 183 80 0 0 chr15 26240691 26240716 -77254258 + (TTC)n Simple_repeat Simple_repeat 1 25 0 3 785 876 25 242 17 chr15 26242162 26242282 -77252692 + B1_Mus2 SINE Alu 1 147 0 3 785 381 131 0 0 chr15 26242282 26242343 -77252631 + (A)n Simple_repeat Simple_repeat 1 61 0 3 785 286 300 25 0 chr15 26243129 26243209 -77251765 - ID4 SINE ID -1 82 1 3 785 378 312 137 28 chr15 26243573 26243784 -77251190 - MIR SINE MIR -11 251 18 3 785 297 361 47 0 chr15 26244195 26244342 -77250632 - MLT1H LTR MaLR -347 202 46 3 785 23 33 0 0 chr15 26244963 26244993 -77249981 + AT_rich Low_complexity Low_complexity 1 30 0 3 785 665 281 0 36 chr15 26245350 26245367 -77249607 - RSINE1 SINE B4 -1 164 148 3 785 267 31 0 0 chr15 26245367 26245399 -77249575 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 785 420 20 0 0 chr15 26245399 26245448 -77249526 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 785 665 281 0 36 chr15 26245448 26245595 -77249379 - RSINE1 SINE B4 -18 147 6 3 785 205 287 34 22 chr15 26245600 26245689 -77249285 + MIR SINE MIR 130 219 -43 3 785 747 299 125 57 chr15 26245841 26246384 -77248590 - L1MA7 LINE L1 0 6291 5712 3 785 601 13 26 0 chr15 26249185 26249263 -77245711 + (GA)n Simple_repeat Simple_repeat 1 80 0 3 785 1424 279 98 26 chr15 26251488 26252110 -77242864 + MTEb-int LTR MaLR 829 1580 0 3 785 278 274 55 0 chr15 26252110 26252183 -77242791 + MTEb LTR MaLR 1 77 -302 3 785 813 270 68 0 chr15 26252194 26252326 -77242648 + MTEb LTR MaLR 143 274 -105 3 785 1149 284 45 45 chr15 26252326 26252702 -77242272 + MTE2a LTR MaLR 1 376 -3 3 785 813 270 68 0 chr15 26252702 26252791 -77242183 + MTEb LTR MaLR 275 378 -1 3 785 913 310 50 28 chr15 26253134 26253587 -77241387 + MLT2B4 LTR ERVL 42 499 -57 3 785 944 117 0 32 chr15 26253589 26253775 -77241199 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 785 776 305 124 67 chr15 26253885 26254513 -77240461 + L1MC3 LINE L1 7049 7712 -73 3 785 396 244 199 5 chr15 26254801 26255007 -77239967 - L1M4 LINE L1 -3519 2627 2382 3 785 522 359 85 40 chr15 26255014 26255342 -77239632 - MLT1A0 LTR MaLR 0 365 23 3 785 358 299 19 25 chr15 26255372 26255533 -77239441 - L1M4 LINE L1 -3777 2369 2210 3 785 258 81 0 0 chr15 26255785 26255822 -77239152 + (TCC)n Simple_repeat Simple_repeat 3 39 0 3 785 219 333 94 12 chr15 26256055 26256140 -77238834 + MIRb SINE MIR 3 94 -174 3 785 22 0 0 0 chr15 26257360 26257382 -77237592 + AT_rich Low_complexity Low_complexity 1 22 0 3 785 2116 150 56 22 chr15 26258619 26258817 -77236157 - RLTR11B LTR ERVK 0 453 248 3 785 758 78 9 0 chr15 26258817 26258932 -77236042 + (TCC)n Simple_repeat Simple_repeat 3 118 0 3 785 2116 150 56 22 chr15 26258932 26259142 -77235832 - RLTR11B LTR ERVK -206 247 31 3 785 929 251 119 67 chr15 26259160 26259621 -77235353 - L1MA8 LINE L1 -16 6275 5791 3 785 1020 271 77 58 chr15 26259702 26260168 -77234806 - L1MA8 LINE L1 -487 5804 5330 3 785 984 94 0 0 chr15 26260193 26260321 -77234653 - B1_Mus1 SINE Alu -20 128 1 3 785 621 248 13 12 chr15 26260364 26260532 -77234442 - L1MA8 LINE L1 -904 5239 5082 3 785 261 283 129 14 chr15 26260556 26260696 -77234278 + Lx8 LINE L1 7318 7473 0 3 785 407 327 142 4 chr15 26260721 26261230 -77233744 - L1MA8 LINE L1 -2119 4024 3434 3 785 8165 44 6 5 chr15 26261216 26262295 -77232679 - L1Md_F2 LINE L1 -2 6580 5501 3 785 1463 282 115 28 chr15 26262295 26263324 -77231650 - L1MA8 LINE L1 -2677 3466 2349 3 785 811 49 0 0 chr15 26264105 26264207 -77230767 - B1_Mm SINE Alu 0 147 46 3 785 316 236 52 41 chr15 26264148 26264245 -77230729 - RLTR25B LTR ERVK -519 509 412 3 785 3256 35 0 3 chr15 26264972 26265339 -77229635 + L1Md_F3 LINE L1 6217 6582 -2 3 785 264 200 0 0 chr15 26265504 26265564 -77229410 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 785 1016 167 147 44 chr15 26266809 26267060 -77227914 - Lx4B LINE L1 -4 7054 6778 3 785 387 0 0 0 chr15 26267389 26267432 -77227542 + (TATG)n Simple_repeat Simple_repeat 2 44 0 3 785 980 130 272 0 chr15 26267439 26267601 -77227373 - B3 SINE B2 -10 206 1 3 785 644 287 51 6 chr15 26267623 26267798 -77227176 - B3A SINE B2 -15 183 1 3 785 603 0 0 0 chr15 26269108 26269175 -77225799 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 3 785 913 150 56 0 chr15 26269696 26269856 -77225118 + URR1A DNA MER1_type 58 226 0 3 785 353 298 61 85 chr15 26269856 26269955 -77225019 - CYRA11_Mm Unknown Y-chromosome -444 173 81 3 785 268 338 19 49 chr15 26270687 26270849 -77224125 - MIRb SINE MIR -46 222 66 3 785 32 0 0 0 chr15 26271118 26271150 -77223824 + AT_rich Low_complexity Low_complexity 1 32 0 3 785 262 317 49 105 chr15 26272806 26272968 -77222006 + MER2 DNA MER2_type 171 323 -22 3 785 229 271 14 0 chr15 26273317 26273387 -77221587 + CT-rich Low_complexity Low_complexity 2 72 0 3 785 905 167 0 46 chr15 26273419 26273570 -77221404 + B1_Mur4 SINE Alu 5 148 -2 3 785 618 304 29 29 chr15 26274506 26274548 -77220426 + B3A SINE B2 1 42 -156 3 785 3508 35 2 10 chr15 26274548 26274947 -77220027 + MTA_Mm LTR MaLR 1 396 0 3 785 618 230 27 187 chr15 26274947 26275134 -77219840 + B3A SINE B2 38 204 -12 3 785 370 248 103 56 chr15 26277217 26277324 -77217650 - PB1D10 SINE Alu -5 112 1 3 785 189 103 16 49 chr15 26278824 26278885 -77216089 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 3 785 4469 48 4 0 chr15 26279305 26279806 -77215168 - RLTR1C LTR ERV1 0 503 1 3 785 593 288 26 0 chr15 26282339 26282492 -77212482 - MTE2b LTR MaLR -14 365 209 3 785 281 265 35 105 chr15 26282528 26282642 -77212332 - MTE2b LTR MaLR -273 106 1 3 785 299 336 42 126 chr15 26283152 26283319 -77211655 - LTR33 LTR ERVL -265 250 98 3 785 1240 296 43 28 chr15 26283700 26284093 -77210881 - MTD LTR MaLR -20 399 1 3 785 751 276 169 25 chr15 26285255 26285886 -77209088 + L1MA4A LINE L1 5299 6031 -260 3 785 264 59 0 0 chr15 26285967 26286001 -77208973 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 785 815 260 106 18 chr15 26286246 26286473 -77208501 - B4A SINE B4 -44 248 2 3 785 277 333 79 24 chr15 26288491 26288617 -77206357 - MLT1C LTR MaLR -49 418 286 3 785 435 169 10 31 chr15 26288669 26288767 -77206207 - Lx5 LINE L1 0 7050 6955 3 785 215 280 178 0 chr15 26289533 26289651 -77205323 - L2a LINE L2 -72 3354 3216 3 785 387 287 42 42 chr15 26289872 26290014 -77204960 - MLT1H LTR MaLR 0 549 408 3 785 279 71 0 0 chr15 26291050 26291092 -77203882 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 785 396 0 0 0 chr15 26291910 26291954 -77203020 + (T)n Simple_repeat Simple_repeat 1 44 0 3 785 346 269 69 110 chr15 26292460 26292706 -77202268 + ORR1E LTR MaLR 81 316 -43 3 785 1228 280 12 57 chr15 26292713 26293126 -77201848 - MTE2a LTR MaLR -5 374 5 3 785 201 147 0 0 chr15 26293544 26293578 -77201396 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 3 785 552 214 5 33 chr15 26293581 26293765 -77201209 + (TA)n Simple_repeat Simple_repeat 2 180 0 3 785 21 0 0 0 chr15 26295839 26295860 -77199114 + AT_rich Low_complexity Low_complexity 1 21 0 3 785 377 368 60 20 chr15 26297341 26297593 -77197381 + MTEb-int LTR MaLR 908 1169 -411 3 785 232 287 67 84 chr15 26297592 26297638 -77197336 + MTEb-int LTR MaLR 1291 1330 -179 3 785 378 0 0 0 chr15 26297638 26297680 -77197294 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 785 378 0 0 0 chr15 26297680 26297721 -77197253 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 785 362 298 74 67 chr15 26297721 26297898 -77197076 + MTEb-int LTR MaLR 1331 1538 -42 3 785 253 275 90 108 chr15 26298118 26298285 -77196689 + MTEb LTR MaLR 207 379 0 3 785 397 317 111 82 chr15 26298337 26298653 -77196321 - MER21B LTR ERV1 -64 799 475 3 785 518 371 37 23 chr15 26298809 26299027 -77195947 - MER21B LTR ERV1 -630 233 13 3 785 275 260 72 51 chr15 26299053 26299191 -77195783 - MIRb SINE MIR -97 171 31 3 785 680 152 8 0 chr15 26299243 26299375 -77195599 + (TG)n Simple_repeat Simple_repeat 1 133 0 3 785 249 113 0 90 chr15 26301272 26301350 -77193624 + (CCA)n Simple_repeat Simple_repeat 2 72 0 3 785 2235 144 108 13 chr15 26301771 26302143 -77192831 - MTB_Mm LTR MaLR 0 407 1 3 785 303 140 0 0 chr15 26302829 26302879 -77192095 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 785 321 26 0 0 chr15 26302879 26302917 -77192057 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 785 324 286 26 0 chr15 26302982 26303059 -77191915 - ID4 SINE ID -4 79 1 3 785 181 351 53 26 chr15 26304573 26304687 -77190287 + L2c LINE L2 3271 3387 0 4 785 522 129 0 0 chr15 26304990 26305075 -77189899 + (TCCC)n Simple_repeat Simple_repeat 1 85 0 4 785 4504 196 9 29 chr15 26305079 26305945 -77189029 - Lx5 LINE L1 -37 7013 6165 4 785 932 156 26 15 chr15 26306051 26306246 -77188728 - Lx9 LINE L1 -1 7643 7447 4 785 248 299 35 0 chr15 26308136 26308223 -77186751 + B1F2 SINE Alu 31 120 -29 4 785 247 315 0 18 chr15 26308225 26308338 -77186636 - L1M5 LINE L1 -2672 3474 3364 4 785 1149 296 58 31 chr15 26310628 26310650 -77184324 - MTE2b LTR MaLR 0 379 358 4 785 198 0 0 0 chr15 26310650 26310672 -77184302 + (TTG)n Simple_repeat Simple_repeat 2 23 0 4 785 1149 296 58 31 chr15 26310672 26311008 -77183966 - MTE2b LTR MaLR -22 357 12 4 785 3264 288 140 37 chr15 26311012 26312444 -77182530 - MTE2b-int LTR MaLR 0 1580 2 4 785 846 241 106 94 chr15 26312447 26312664 -77182310 - MTE2b LTR MaLR 0 379 160 4 785 204 67 0 0 chr15 26312664 26312694 -77182280 + (TTG)n Simple_repeat Simple_repeat 2 31 0 4 785 846 241 106 94 chr15 26312694 26312796 -77182178 - MTE2b LTR MaLR -220 159 56 4 785 181 239 22 0 chr15 26312952 26312998 -77181976 + MIR SINE MIR 159 205 -57 4 785 283 95 31 31 chr15 26313290 26313355 -77181619 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 4 785 210 212 30 15 chr15 26313368 26313396 -77181578 + polypurine Low_complexity Low_complexity 1 29 0 4 785 192 77 0 0 chr15 26313396 26313422 -77181552 + (CAGG)n Simple_repeat Simple_repeat 2 27 0 4 785 210 212 30 15 chr15 26313422 26313460 -77181514 + polypurine Low_complexity Low_complexity 30 68 0 4 785 3743 54 30 4 chr15 26313492 26313954 -77181020 + L1_Mus3 LINE L1 6160 6633 -5 4 785 428 311 17 0 chr15 26313972 26314091 -77180883 - B1F2 SINE Alu -8 141 21 4 785 930 152 0 0 chr15 26315393 26315666 -77179308 + (CA)n Simple_repeat Simple_repeat 1 273 0 4 785 228 325 108 0 chr15 26318425 26318508 -77176466 + MER5A DNA MER1_type 31 122 -67 4 785 253 188 99 165 chr15 26320309 26320430 -77174544 + MER65D LTR ERV1 12 124 -349 4 785 245 256 25 13 chr15 26321221 26321300 -77173674 - ID2 SINE ID -3 80 1 4 785 27 0 0 0 chr15 26321360 26321387 -77173587 + AT_rich Low_complexity Low_complexity 1 27 0 4 785 420 311 46 21 chr15 26321475 26321669 -77173305 + MER3 DNA MER1_type 6 204 -5 4 785 1757 30 0 0 chr15 26324128 26324329 -77170645 - L1Md_A LINE L1 0 6582 6382 4 785 315 289 0 13 chr15 26324601 26324678 -77170296 + RSINE1 SINE B4 3 78 -87 4 785 323 289 38 19 chr15 26324850 26324956 -77170018 + B3A SINE B2 1 108 -90 4 785 22 0 0 0 chr15 26324967 26324989 -77169985 + AT_rich Low_complexity Low_complexity 1 22 0 4 785 501 62 0 0 chr15 26325239 26325304 -77169670 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 4 785 372 94 0 0 chr15 26325771 26325824 -77169150 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 785 4023 35 0 4 chr15 26327355 26327810 -77167164 - L1Md_F3 LINE L1 0 6584 6132 4 785 189 74 0 0 chr15 26328187 26328214 -77166760 + (A)n Simple_repeat Simple_repeat 1 27 0 4 785 701 38 19 19 chr15 26328319 26328426 -77166548 + (GAAA)n Simple_repeat Simple_repeat 1 107 0 4 785 957 158 0 0 chr15 26328823 26329000 -77165974 + CT-rich Low_complexity Low_complexity 3 179 0 4 785 474 101 0 0 chr15 26329006 26329075 -77165899 + (TC)n Simple_repeat Simple_repeat 2 70 0 4 785 289 236 13 77 chr15 26329082 26329160 -77165814 - B1_Mur1 SINE Alu -20 129 57 4 785 231 272 136 22 chr15 26329880 26330062 -77164912 - MIRb SINE MIR -17 245 57 4 785 284 205 16 43 chr15 26330331 26330515 -77164459 + (TA)n Simple_repeat Simple_repeat 2 180 0 4 785 306 293 0 35 chr15 26330669 26330754 -77164220 + RSINE1 SINE B4 16 97 -68 4 785 288 0 0 0 chr15 26330765 26330797 -77164177 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 785 25 0 0 0 chr15 26330992 26331017 -77163957 + AT_rich Low_complexity Low_complexity 1 25 0 4 785 432 97 0 0 chr15 26331513 26331575 -77163399 + (TTC)n Simple_repeat Simple_repeat 2 63 0 4 785 180 0 0 0 chr15 26332931 26332951 -77162023 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 785 343 315 17 69 chr15 26332986 26333102 -77161872 - RSINE1 SINE B4 -25 140 31 4 785 371 240 47 0 chr15 26333411 26333540 -77161434 - Lx6 LINE L1 0 7460 7326 4 785 522 0 0 0 chr15 26333554 26333612 -77161362 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 785 229 271 34 45 chr15 26334312 26334401 -77160573 + MTEb LTR MaLR 269 356 -23 4 785 356 320 75 45 chr15 26334569 26334703 -77160271 - MLT1B LTR MaLR -19 389 251 4 785 205 175 25 0 chr15 26334740 26334780 -77160194 + GA-rich Low_complexity Low_complexity 1 41 0 4 785 338 178 37 110 chr15 26334884 26334966 -77160008 - ID4 SINE ID -6 77 2 4 785 192 125 0 0 chr15 26335028 26335060 -77159914 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 785 344 292 10 0 chr15 26336761 26336857 -77158117 + GA-rich Low_complexity Low_complexity 3 99 0 4 785 198 0 0 0 chr15 26337168 26337190 -77157784 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 4 785 560 316 53 12 chr15 26338094 26338264 -77156710 + MIR SINE MIR 16 192 -70 4 785 234 0 0 0 chr15 26338265 26338291 -77156683 + (TC)n Simple_repeat Simple_repeat 2 27 0 4 785 414 0 0 0 chr15 26338291 26338336 -77156638 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 785 485 186 0 17 chr15 26340937 26341057 -77153917 + (CATA)n Simple_repeat Simple_repeat 1 118 0 4 785 435 234 0 0 chr15 26341144 26341289 -77153685 + (TG)n Simple_repeat Simple_repeat 2 146 0 4 785 26 30 0 0 chr15 26342185 26342218 -77152756 + AT_rich Low_complexity Low_complexity 1 33 0 4 785 842 303 52 7 chr15 26343072 26343361 -77151613 - Lx8 LINE L1 -66 7407 7106 4 785 221 304 148 28 chr15 26343449 26343625 -77151349 + L2 LINE L2 2540 2736 -683 4 785 518 335 64 15 chr15 26343814 26344078 -77150896 + MLT1C LTR MaLR 191 467 0 4 785 211 375 135 15 chr15 26344082 26344342 -77150632 + L2 LINE L2 2756 3046 -373 4 785 198 128 0 0 chr15 26344453 26344492 -77150482 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 4 785 990 152 0 0 chr15 26344495 26344672 -77150302 + CT-rich Low_complexity Low_complexity 1 177 0 4 786 581 88 10 0 chr15 26345671 26345773 -77149201 + (GA)n Simple_repeat Simple_repeat 2 104 0 4 786 532 315 69 32 chr15 26347351 26347755 -77147219 - L1MA5 LINE L1 -4 6296 5878 4 786 3176 187 24 11 chr15 26347751 26348378 -77146596 - RMER1A Other Other 0 1030 396 4 786 183 80 0 0 chr15 26348623 26348648 -77146326 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 786 548 95 0 31 chr15 26348652 26348750 -77146224 + (TG)n Simple_repeat Simple_repeat 1 95 0 4 786 2305 89 79 11 chr15 26348751 26349105 -77145869 + MTB LTR MaLR 23 400 0 4 786 459 0 0 0 chr15 26349105 26349156 -77145818 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 786 423 317 35 46 chr15 26349162 26349423 -77145551 - Lx8 LINE L1 -177 7467 7210 4 786 1112 270 40 18 chr15 26349680 26350108 -77144866 - Lx8 LINE L1 -1555 5918 5449 4 786 407 238 25 185 chr15 26350132 26350602 -77144372 + Lx9 LINE L1 7225 7619 -25 4 786 22 56 0 0 chr15 26350607 26350643 -77144331 + AT_rich Low_complexity Low_complexity 1 36 0 4 786 7769 33 1 6 chr15 26351151 26352744 -77142230 - L1Md_F2 LINE L1 -1 6581 4999 4 786 1938 41 0 0 chr15 26352740 26352985 -77141989 + L1Md_F2 LINE L1 4722 4966 -917 4 786 212 294 0 0 chr15 26353367 26353418 -77141556 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 786 244 248 65 105 chr15 26353420 26353573 -77141401 - RLTR22_Mur LTR ERVK -394 1454 1308 4 786 180 281 0 0 chr15 26353585 26353674 -77141300 + (CA)n Simple_repeat Simple_repeat 1 89 0 4 786 351 327 0 0 chr15 26353687 26353791 -77141183 + (CA)n Simple_repeat Simple_repeat 1 104 0 4 786 225 139 0 0 chr15 26353822 26353865 -77141109 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 786 430 296 83 48 chr15 26356973 26357225 -77137749 + MIR SINE MIR 1 261 -1 4 786 2725 95 2 5 chr15 26357473 26357886 -77137088 - Lx3_Mus LINE L1 -677 6332 5921 4 786 977 142 0 6 chr15 26357889 26358059 -77136915 + (TTCTC)n Simple_repeat Simple_repeat 2 170 0 4 786 342 0 0 0 chr15 26358059 26358097 -77136877 + (TTC)n Simple_repeat Simple_repeat 1 38 0 4 786 1389 61 0 0 chr15 26358097 26358277 -77136697 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 4 786 4091 58 2 7 chr15 26358277 26358868 -77136106 - Lx3_Mus LINE L1 -1094 5915 5333 4 786 5118 84 11 3 chr15 26358868 26359568 -77135406 + Lx3_Mus LINE L1 6304 7009 0 4 786 513 203 0 0 chr15 26359779 26359956 -77135018 + GA-rich Low_complexity Low_complexity 2 178 0 4 786 222 231 0 0 chr15 26359956 26360008 -77134966 + (CAGA)n Simple_repeat Simple_repeat 1 52 0 4 786 203 74 93 0 chr15 26360081 26360135 -77134839 + CT-rich Low_complexity Low_complexity 3 61 0 4 786 236 240 176 46 chr15 26361144 26361275 -77133699 - MIRb SINE MIR -45 223 76 4 786 2087 58 11 0 chr15 26361671 26361949 -77133025 + L1_Mus3 LINE L1 6356 6636 -2 4 786 229 312 150 41 chr15 26362255 26362402 -77132572 + MIRc SINE MIR 67 229 -39 4 786 584 27 14 0 chr15 26363534 26363608 -77131366 + (CA)n Simple_repeat Simple_repeat 2 76 0 4 786 1229 139 85 37 chr15 26364344 26364687 -77130287 - Lx2 LINE L1 -1 6996 6787 4 786 185 263 17 17 chr15 26364800 26364858 -77130116 + MIRc SINE MIR 81 138 -130 4 786 1049 251 92 78 chr15 26364990 26365348 -77129626 + MTEa LTR MaLR 15 377 -2 4 786 371 262 114 30 chr15 26366397 26366615 -77128359 - MLT1C LTR MaLR 0 467 172 4 786 336 283 49 77 chr15 26366974 26367245 -77127729 + ORR1E LTR MaLR 4 269 -101 4 786 640 297 69 50 chr15 26368911 26369272 -77125702 + Lx9 LINE L1 7005 7372 -272 4 786 227 348 26 9 chr15 26369281 26369394 -77125580 + Lx8 LINE L1 7210 7324 -149 4 786 185 152 22 0 chr15 26369395 26369422 -77125552 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 786 315 0 0 0 chr15 26369422 26369457 -77125517 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 786 185 152 22 0 chr15 26369457 26369475 -77125499 + (CA)n Simple_repeat Simple_repeat 2 19 0 4 786 190 282 0 0 chr15 26369594 26369633 -77125341 - MIR SINE MIR -72 190 152 4 786 248 177 0 31 chr15 26370003 26370067 -77124907 + (TATATG)n Simple_repeat Simple_repeat 1 62 0 5 786 424 335 18 71 chr15 26370091 26370261 -77124713 - RSINE1 SINE B4 0 165 5 5 786 389 313 67 70 chr15 26370968 26371401 -77123573 + MLT2B4 LTR ERVL 1 520 0 5 786 6044 60 23 9 chr15 26372245 26373036 -77121938 + L1_Mus1 LINE L1 5765 6566 -1 5 786 248 250 57 0 chr15 26373073 26373161 -77121813 + CT-rich Low_complexity Low_complexity 5 97 0 5 786 182 171 24 0 chr15 26373163 26373204 -77121770 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 786 546 332 79 19 chr15 26373227 26373494 -77121480 - B4A SINE B4 -8 284 2 5 786 1127 65 6 17 chr15 26374004 26374177 -77120797 + L1Md_F2 LINE L1 6411 6581 -1 5 786 218 56 28 0 chr15 26374182 26374218 -77120756 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 5 786 405 0 0 0 chr15 26374304 26374349 -77120625 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 786 405 0 0 0 chr15 26374494 26374539 -77120435 + (TC)n Simple_repeat Simple_repeat 1 45 0 5 786 252 0 0 0 chr15 26374539 26374566 -77120408 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 786 435 349 15 15 chr15 26374966 26374996 -77119978 - MIRb SINE MIR -61 207 179 5 786 455 0 18 0 chr15 26374996 26375051 -77119923 + (TAA)n Simple_repeat Simple_repeat 2 57 0 5 786 435 349 15 15 chr15 26375051 26375215 -77119759 - MIRb SINE MIR -90 178 14 5 786 386 190 0 20 chr15 26375644 26375746 -77119228 + GA-rich Low_complexity Low_complexity 3 102 0 5 786 360 0 0 0 chr15 26376557 26376597 -77118377 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 786 265 309 55 41 chr15 26377446 26377591 -77117383 - MLT1A1 LTR MaLR -256 152 6 5 786 291 114 0 0 chr15 26377835 26377879 -77117095 + (CATA)n Simple_repeat Simple_repeat 4 47 0 5 786 809 187 5 51 chr15 26377967 26378153 -77116821 - MTEa LTR MaLR -32 327 164 5 786 2805 66 30 2 chr15 26378155 26378551 -77116423 - L1_Mus3 LINE L1 -75 6563 6157 5 786 3852 297 110 17 chr15 26378709 26378928 -77116046 - MTE2b-int LTR MaLR -2 1578 1363 5 786 693 0 0 0 chr15 26378928 26379005 -77115969 + (GAA)n Simple_repeat Simple_repeat 1 77 0 5 786 3852 297 110 17 chr15 26379005 26380135 -77114839 - MTE2b-int LTR MaLR -218 1362 104 5 786 6121 209 32 29 chr15 26380154 26381679 -77113295 - Lx7 LINE L1 -594 7102 5561 5 786 1438 169 219 3 chr15 26381679 26381981 -77112993 - ORR1B2 LTR MaLR 0 367 1 5 786 1772 167 26 36 chr15 26381981 26382043 -77112931 - Lx7 LINE L1 -320 5560 5499 5 786 468 252 83 16 chr15 26382047 26382168 -77112806 - MTE2b-int LTR MaLR -1451 129 1 5 786 657 308 105 74 chr15 26382179 26382344 -77112630 - MTE2b LTR MaLR -12 367 184 5 786 186 43 0 0 chr15 26382344 26382367 -77112607 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 786 657 308 105 74 chr15 26382367 26382552 -77112422 - MTE2b LTR MaLR -196 183 6 5 786 276 300 0 0 chr15 26382697 26382787 -77112187 + GA-rich Low_complexity Low_complexity 1 90 0 5 786 184 308 0 0 chr15 26382818 26382857 -77112117 + MIR3 SINE MIR 126 164 -44 5 786 247 250 0 0 chr15 26384010 26384074 -77110900 + (CAA)n Simple_repeat Simple_repeat 3 66 0 5 786 39 0 0 0 chr15 26384691 26384730 -77110244 + AT_rich Low_complexity Low_complexity 1 39 0 5 786 234 0 0 0 chr15 26385000 26385026 -77109948 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 786 326 366 111 39 chr15 26386382 26386868 -77108106 - MLT1E2 LTR MaLR -24 603 83 5 786 220 261 0 0 chr15 26387048 26387094 -77107880 + CT-rich Low_complexity Low_complexity 1 46 0 5 786 539 246 0 0 chr15 26388256 26388369 -77106605 - B1F SINE Alu -36 113 1 5 786 1048 133 18 0 chr15 26388683 26388848 -77106126 - URR1A DNA MER1_type 0 226 59 5 786 525 273 91 14 chr15 26388684 26388892 -77106082 + CYRA11_Mm Unknown Y-chromosome 172 395 -222 5 786 279 370 21 28 chr15 26389463 26389605 -77105369 - MER91A DNA Tip100 -32 164 24 5 786 318 229 0 46 chr15 26391826 26391913 -77103061 + Lx7 LINE L1 7191 7273 -423 5 786 5228 220 26 31 chr15 26392648 26393941 -77101033 + Lx7 LINE L1 6408 7694 -2 5 786 276 339 23 19 chr15 26394518 26394633 -77100341 + MLT1B LTR MaLR 187 322 -68 5 786 187 394 36 21 chr15 26394663 26394803 -77100171 + L3 LINE CR1 2143 2284 -2205 5 786 355 299 49 37 chr15 26395290 26395453 -77099521 - MIRb SINE MIR -1 267 103 5 786 187 154 73 55 chr15 26396000 26396055 -77098919 - L3 LINE CR1 -696 3793 3738 5 786 27 0 0 0 chr15 26396406 26396433 -77098541 + AT_rich Low_complexity Low_complexity 1 27 0 5 786 207 186 0 0 chr15 26396677 26396720 -77098254 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 786 612 0 0 0 chr15 26397536 26397604 -77097370 + (CTATT)n Simple_repeat Simple_repeat 2 69 0 5 786 1003 124 0 11 chr15 26397607 26397786 -77097188 + (CATCC)n Simple_repeat Simple_repeat 2 178 0 5 786 607 224 96 7 chr15 26398813 26398948 -77096026 + B1_Mur3 SINE Alu 2 148 -1 5 786 299 315 101 20 chr15 26399609 26399758 -77095216 - MER20 DNA MER1_type -53 166 6 5 786 288 0 0 0 chr15 26401587 26401619 -77093355 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 786 668 313 105 55 chr15 26402697 26403230 -77091744 + L1MA9 LINE L1 5569 6149 -163 5 786 405 0 0 0 chr15 26403230 26403275 -77091699 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 786 668 313 105 55 chr15 26403275 26403397 -77091577 + L1MA9 LINE L1 6150 6257 -55 5 786 440 269 162 67 chr15 26403916 26404095 -77090879 - B4A SINE B4 -12 280 85 5 786 305 232 12 0 chr15 26404096 26404178 -77090796 - Lx9 LINE L1 -7 7637 7555 5 786 324 64 0 0 chr15 26404232 26404279 -77090695 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 786 277 183 155 0 chr15 26404279 26404350 -77090624 - Lx9 LINE L1 -191 7453 7372 5 786 336 250 48 0 chr15 26404350 26404434 -77090540 - B4A SINE B4 -200 92 5 5 786 437 47 0 15 chr15 26404537 26404602 -77090372 + (CAAAC)n Simple_repeat Simple_repeat 1 64 0 5 786 633 313 87 30 chr15 26404931 26405620 -77089354 - L1MA4 LINE L1 -26 6265 5545 5 786 836 282 111 18 chr15 26405625 26406249 -77088725 + L1M2 LINE L1 4673 5354 -789 5 786 393 75 0 0 chr15 26406249 26406302 -77088672 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 786 465 241 85 24 chr15 26406302 26406486 -77088488 + L1M2 LINE L1 5358 5554 -746 5 786 23 33 0 0 chr15 26407281 26407311 -77087663 + AT_rich Low_complexity Low_complexity 1 30 0 5 786 267 295 44 18 chr15 26407612 26407726 -77087248 + MLT1A0 LTR MaLR 218 334 -31 5 786 33838 74 1 19 chr15 26407884 26414043 -77080931 - L1_Mus1 LINE L1 0 6567 511 5 786 1634 265 16 16 chr15 26414077 26414514 -77080460 + Lx6 LINE L1 6855 7291 -169 5 786 24 0 0 0 chr15 26414535 26414559 -77080415 + AT_rich Low_complexity Low_complexity 1 24 0 5 786 34 72 0 0 chr15 26414631 26414700 -77080274 + AT_rich Low_complexity Low_complexity 1 69 0 5 786 577 255 77 5 chr15 26415551 26415760 -77079214 + L1M2 LINE L1 5387 5610 -690 5 786 373 287 158 29 chr15 26415890 26416386 -77078588 + L1M4c LINE L1 2353 2912 -3470 5 786 1949 257 38 44 chr15 26416424 26417088 -77077886 + L1MB3 LINE L1 5514 6173 -10 5 786 1279 27 0 0 chr15 26417783 26417930 -77077044 - B1_Mus1 SINE Alu 0 148 2 5 786 3359 43 0 0 chr15 26417989 26418385 -77076589 + MTA_Mm LTR MaLR 1 396 0 5 786 463 308 58 0 chr15 26418614 26418734 -77076240 - RSINE1 SINE B4 -24 141 15 5 786 296 235 12 12 chr15 26419933 26420019 -77074955 - Lx9 LINE L1 -640 7004 6919 5 786 446 269 252 33 chr15 26420009 26420251 -77074723 + Lx9 LINE L1 7006 7300 -344 5 786 8575 18 0 0 chr15 26420251 26421223 -77073751 + L1Md_A LINE L1 5611 6582 0 5 786 535 260 111 0 chr15 26421312 26421520 -77073454 + Lx9 LINE L1 7287 7517 -127 5 786 200 213 16 0 chr15 26421537 26421598 -77073376 + (TATATG)n Simple_repeat Simple_repeat 5 66 0 5 786 234 153 69 23 chr15 26421598 26421685 -77073289 + Lx9 LINE L1 7458 7548 -96 5 786 26 50 0 0 chr15 26421730 26421770 -77073204 + AT_rich Low_complexity Low_complexity 1 40 0 5 786 13671 184 15 181 chr15 26421838 26422984 -77071990 - L1_Mur1 LINE L1 -447 5439 4307 5 786 3122 68 2 8 chr15 26422984 26423382 -77071592 - MTA_Mm LTR MaLR 0 396 1 5 786 13671 184 15 181 chr15 26423382 26424860 -77070114 - L1_Mur1 LINE L1 -1580 4306 3496 5 786 5253 90 25 0 chr15 26424860 26425592 -77069382 + Lx3_Mus LINE L1 6260 7009 0 5 786 13671 184 15 181 chr15 26425592 26427195 -77067779 - L1_Mur1 LINE L1 -2391 3495 2054 5 786 339 85 0 0 chr15 26427195 26427242 -77067732 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 786 13671 184 15 181 chr15 26427242 26427975 -77066999 - L1_Mur1 LINE L1 -3833 2053 1297 5 786 546 206 199 13 chr15 26427965 26428201 -77066773 + Lx9 LINE L1 7360 7639 -5 5 786 335 278 67 12 chr15 26428244 26428408 -77066566 + L1MC4a LINE L1 7112 7284 -598 5 786 1134 215 81 17 chr15 26428480 26428826 -77066148 - Lx9 LINE L1 -7 7637 7270 5 786 265 197 14 0 chr15 26428824 26428895 -77066079 + Lx9 LINE L1 6912 6983 -661 5 786 257 0 30 0 chr15 26429487 26429520 -77065454 + (GTTTG)n Simple_repeat Simple_repeat 2 35 0 5 786 348 60 60 0 chr15 26429716 26429783 -77065191 + (TTTTG)n Simple_repeat Simple_repeat 2 72 0 5 786 556 296 33 7 chr15 26429800 26429953 -77065021 - RSINE1 SINE B4 0 165 9 5 786 1036 68 0 0 chr15 26430204 26430337 -77064637 - B1_Mus1 SINE Alu -13 135 3 5 786 2792 194 85 133 chr15 26431082 26431931 -77063043 + RLTR40 LTR ERVK 3 810 -7 5 786 636 219 6 17 chr15 26432329 26432510 -77062464 + GA-rich Low_complexity Low_complexity 2 180 0 5 786 24 32 0 0 chr15 26432795 26432826 -77062148 + AT_rich Low_complexity Low_complexity 1 31 0 5 786 451 335 78 12 chr15 26432856 26433113 -77061861 - Lx8 LINE L1 -1611 5862 5589 5 786 227 210 233 8 chr15 26433165 26433285 -77061689 - L1M4c LINE L1 -4221 2163 2017 5 786 321 172 0 0 chr15 26433403 26433496 -77061478 + (TA)n Simple_repeat Simple_repeat 2 94 0 5 786 26 0 0 0 chr15 26434170 26434196 -77060778 + AT_rich Low_complexity Low_complexity 1 26 0 5 786 362 270 0 83 chr15 26434220 26434329 -77060645 + B2_Mm2 SINE B2 1 100 -95 5 786 429 241 73 72 chr15 26434355 26434559 -77060415 - MLT1E LTR MaLR -349 305 44 5 786 250 250 138 46 chr15 26434549 26434679 -77060295 - MLT2F LTR ERVL -516 147 6 5 786 878 318 75 8 chr15 26435370 26435636 -77059338 - B4A SINE B4 -3 289 6 5 786 4398 211 23 92 chr15 26435664 26436809 -77058165 - RMER1B Other Other 0 1066 1 5 786 207 0 0 0 chr15 26437219 26437242 -77057732 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 5 786 816 265 52 3 chr15 26437749 26438059 -77056915 - L1MA6 LINE L1 -108 6192 5868 6 786 2135 114 14 39 chr15 26438733 26439088 -77055886 - Lx3C LINE L1 0 6976 6631 6 786 238 386 34 54 chr15 26439266 26439414 -77055560 + B1_Mur3 SINE Alu 1 145 -4 6 786 21 0 0 0 chr15 26439760 26439781 -77055193 + AT_rich Low_complexity Low_complexity 1 21 0 6 786 280 300 9 35 chr15 26439881 26439995 -77054979 + CT-rich Low_complexity Low_complexity 2 112 0 6 786 338 179 0 10 chr15 26440045 26440141 -77054833 + (CAT)n Simple_repeat Simple_repeat 3 97 0 6 786 200 100 0 24 chr15 26440139 26440180 -77054794 + (TC)n Simple_repeat Simple_repeat 1 40 0 6 786 4499 116 3 36 chr15 26441282 26441982 -77052992 - Lx2 LINE L1 -1 6996 6320 6 786 5052 48 33 6 chr15 26442068 26442712 -77052262 - L1Md_F2 LINE L1 -7 6575 5915 6 786 1005 301 25 22 chr15 26442882 26443198 -77051776 - MTEb LTR MaLR -2 377 61 6 786 606 303 41 0 chr15 26443250 26443445 -77051529 - MTE-int LTR MaLR 0 1580 1378 6 786 1190 278 62 21 chr15 26443496 26443834 -77051140 - MTEa LTR MaLR -3 376 25 6 786 1653 319 47 17 chr15 26443839 26444419 -77050555 - MTE-int LTR MaLR -318 1262 666 6 786 681 163 78 0 chr15 26444394 26444523 -77050451 + URR1A DNA MER1_type 75 213 -13 6 786 711 319 65 88 chr15 26444586 26444940 -77050034 - MTE-int LTR MaLR -929 651 306 6 786 488 151 20 7 chr15 26444948 26445095 -77049879 + (TCTA)n Simple_repeat Simple_repeat 3 151 0 6 786 25 0 0 0 chr15 26446024 26446049 -77048925 + AT_rich Low_complexity Low_complexity 1 25 0 6 786 515 229 9 52 chr15 26446096 26446211 -77048763 - B3A SINE B2 -83 115 6 6 786 547 275 68 8 chr15 26446237 26446369 -77048605 - B1_Mur1 SINE Alu -7 142 3 6 786 580 282 19 67 chr15 26446659 26446868 -77048106 + MLT2C2 LTR ERVL 34 232 -232 6 786 1042 207 3 19 chr15 26447271 26447490 -77047484 - MTD LTR MaLR -3 416 182 6 786 307 105 35 0 chr15 26447493 26447550 -77047424 + (TTG)n Simple_repeat Simple_repeat 2 60 0 6 786 1148 69 0 0 chr15 26447551 26447696 -77047278 - B1_Mus1 SINE Alu -2 146 2 6 786 641 249 17 42 chr15 26447700 26447883 -77047091 - MTD LTR MaLR -202 219 58 6 786 186 43 0 0 chr15 26447883 26447906 -77047068 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 6 786 614 284 4 142 chr15 26447906 26447976 -77046998 - MTD LTR MaLR -364 57 1 6 786 303 404 67 5 chr15 26447976 26448174 -77046800 - MLT2B1 LTR ERVL -16 538 328 6 786 397 247 118 43 chr15 26448218 26448404 -77046570 - MLT2B1 LTR ERVL -319 201 2 6 786 262 204 0 18 chr15 26448843 26448898 -77046076 - L1M6 LINE L1 -6441 55 2 6 786 246 377 82 0 chr15 26449927 26450073 -77044901 + MER5A DNA MER1_type 5 162 -27 6 786 221 287 138 0 chr15 26450251 26450338 -77044636 - MIRb SINE MIR -84 184 86 6 786 914 249 115 39 chr15 26450816 26451147 -77043827 + RLTR14 LTR ERV1 24 379 -3 6 786 22 35 0 0 chr15 26451456 26451485 -77043489 + AT_rich Low_complexity Low_complexity 1 29 0 6 786 324 227 93 0 chr15 26452720 26452817 -77042157 - MER34A1 LTR ERV1 -81 506 401 6 786 229 281 76 42 chr15 26454617 26454736 -77040238 + MLT1A1 LTR MaLR 265 387 -21 6 786 642 273 153 24 chr15 26454934 26455189 -77039785 + B4A SINE B4 1 288 -4 6 786 333 47 0 0 chr15 26455267 26455310 -77039664 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 786 428 250 19 9 chr15 26455355 26455460 -77039514 + Lx9 LINE L1 7091 7196 -448 6 786 225 0 0 0 chr15 26455725 26455750 -77039224 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 6 786 225 0 0 0 chr15 26455750 26455774 -77039200 + (TCTA)n Simple_repeat Simple_repeat 2 26 0 6 786 210 174 0 0 chr15 26455974 26456020 -77038954 + (ATG)n Simple_repeat Simple_repeat 3 48 0 6 786 615 311 166 40 chr15 26457027 26457479 -77037495 + MLT1F LTR MaLR 11 519 -29 6 786 450 0 0 0 chr15 26457523 26457573 -77037401 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 786 3531 64 0 2 chr15 26458051 26458502 -77036472 + L1_Mus1 LINE L1 6118 6567 0 6 786 247 207 35 0 chr15 26458558 26458616 -77036358 + CT-rich Low_complexity Low_complexity 3 62 0 6 786 282 73 0 0 chr15 26458773 26458814 -77036160 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 6 786 447 35 0 0 chr15 26459458 26459515 -77035459 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 786 267 31 0 0 chr15 26460379 26460411 -77034563 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 786 450 310 27 14 chr15 26460920 26461067 -77033907 - B1F1 SINE Alu 0 149 1 6 786 933 322 21 18 chr15 26461252 26461578 -77033396 - MTEb-int LTR MaLR -1253 327 1 6 786 444 259 82 49 chr15 26461580 26461763 -77033211 - MTEb LTR MaLR -18 361 171 6 786 240 35 0 0 chr15 26463453 26463482 -77031492 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 786 189 0 0 0 chr15 26464396 26464417 -77030557 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 786 351 0 0 0 chr15 26464417 26464455 -77030519 + (GA)n Simple_repeat Simple_repeat 2 40 0 6 786 281 316 0 10 chr15 26464894 26464993 -77029981 + (TG)n Simple_repeat Simple_repeat 1 98 0 6 786 1314 303 73 24 chr15 26465005 26465542 -77029432 - Lx8 LINE L1 -352 7121 6559 6 786 181 293 62 62 chr15 26465582 26465662 -77029312 + L2a LINE L2 3328 3407 -19 6 786 186 244 111 37 chr15 26465796 26465877 -77029097 + L3 LINE CR1 2665 2751 -1738 6 786 2288 135 57 3 chr15 26466648 26467034 -77027940 - MTB_Mm LTR MaLR 0 407 1 6 786 5437 169 93 55 chr15 26467034 26468163 -77026811 - MTB_Mm-int LTR MaLR 0 1258 58 6 786 5322 48 20 1 chr15 26468163 26468847 -77026127 + L1_Mus3 LINE L1 5939 6635 -3 6 786 5437 169 93 55 chr15 26468847 26468927 -77026047 - MTB_Mm-int LTR MaLR -1201 57 3 6 786 588 137 0 0 chr15 26468945 26469040 -77025934 + ORR1B1 LTR MaLR 19 113 -281 6 786 874 138 7 14 chr15 26469030 26469170 -77025804 + ORR1B1 LTR MaLR 254 392 -2 6 786 371 344 105 26 chr15 26469664 26469977 -77024997 + MER46C DNA MER2_type 1 338 0 6 786 186 43 0 0 chr15 26470319 26470342 -77024632 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 786 360 0 0 0 chr15 26471274 26471314 -77023660 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 6 786 300 289 0 12 chr15 26472217 26472301 -77022673 - MIR SINE MIR -90 118 36 6 786 23 0 0 0 chr15 26472695 26472718 -77022256 + AT_rich Low_complexity Low_complexity 1 23 0 6 786 593 98 0 0 chr15 26474211 26474293 -77020681 - L1_Mus3 LINE L1 -452 6186 6105 6 786 3047 66 12 2 chr15 26474293 26474701 -77020273 + L1_Mus3 LINE L1 6226 6637 -1 6 786 2418 98 3 0 chr15 26474947 26475273 -77019701 + ORR1A2 LTR MaLR 1 327 0 6 786 333 325 132 92 chr15 26475324 26475727 -77019247 + L2c LINE L2 2956 3386 -1 6 787 648 0 0 0 chr15 26478497 26478569 -77016405 + (CAGG)n Simple_repeat Simple_repeat 4 75 0 6 787 3531 15 2 0 chr15 26478944 26479347 -77015627 - L1Md_A LINE L1 0 6582 6179 6 787 3687 68 0 2 chr15 26479942 26480416 -77014558 + L1_Mus1 LINE L1 6095 6567 0 6 787 787 254 11 0 chr15 26481875 26482060 -77012914 + B3A SINE B2 1 187 -11 6 787 22 56 0 0 chr15 26482069 26482105 -77012869 + AT_rich Low_complexity Low_complexity 1 36 0 6 787 425 282 108 81 chr15 26483647 26483832 -77011142 + B3A SINE B2 9 198 0 6 787 261 0 0 0 chr15 26484821 26484850 -77010124 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 787 938 261 10 10 chr15 26486074 26486283 -77008691 + B3 SINE B2 1 209 -7 6 787 406 315 77 70 chr15 26486842 26487115 -77007859 + B4A SINE B4 2 276 -16 6 787 189 147 0 0 chr15 26487184 26487218 -77007756 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 787 306 0 0 0 chr15 26488350 26488384 -77006590 + (TGGA)n Simple_repeat Simple_repeat 3 36 0 6 787 21 36 0 0 chr15 26488558 26488586 -77006388 + AT_rich Low_complexity Low_complexity 1 28 0 6 787 893 294 61 61 chr15 26489336 26489695 -77005279 - ORR1E LTR MaLR 0 359 1 6 787 474 327 45 18 chr15 26490010 26490231 -77004743 + RMER15 LTR ERVL 344 570 -5 6 787 629 47 0 12 chr15 26490778 26490864 -77004110 + (GA)n Simple_repeat Simple_repeat 2 86 0 6 787 970 47 103 45 chr15 26491225 26491381 -77003593 + B2_Mm2 SINE B2 31 195 0 6 787 292 310 8 87 chr15 26493087 26493214 -77001760 + MLT1C LTR MaLR 1 117 -350 6 787 2177 155 50 8 chr15 26496694 26497072 -76997902 - ORR1B1 LTR MaLR 0 394 1 6 787 624 298 126 20 chr15 26497591 26497892 -76997082 + MLT1A0 LTR MaLR 33 365 0 6 787 467 267 9 0 chr15 26497983 26498099 -76996875 - Lx9 LINE L1 -783 6861 6745 6 787 1726 175 55 6 chr15 26498093 26498437 -76996537 + Lx9 LINE L1 6859 7219 -425 6 787 1016 172 67 75 chr15 26498448 26498794 -76996180 + Lx9 LINE L1 7295 7637 -7 6 787 685 260 69 0 chr15 26500475 26500679 -76994295 + MER2 DNA MER2_type 93 310 -35 1 787 375 127 0 0 chr15 26501238 26501301 -76993673 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 787 267 333 0 12 chr15 26501694 26501776 -76993198 + ID4 SINE ID 3 83 0 3 787 227 298 10 78 chr15 26501776 26501796 -76993178 + ID_B1 SINE B4 3 97 -127 4 787 316 302 21 154 chr15 26502320 26502508 -76992466 + RSINE1 SINE B4 3 165 0 5 787 23 0 0 0 chr15 26503165 26503188 -76991786 + AT_rich Low_complexity Low_complexity 1 23 0 6 787 799 271 145 3 chr15 26503202 26503498 -76991476 + RCHARR1 DNA MER1_type 636 973 -1 7 787 246 62 0 0 chr15 26504088 26504120 -76990854 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 8 787 507 330 73 11 chr15 26506174 26506352 -76988622 + MTE2b LTR MaLR 183 371 -8 9 787 303 320 20 20 chr15 26507189 26507291 -76987683 - MER5B DNA MER1_type -6 172 71 1 787 216 224 82 0 chr15 26507711 26507760 -76987214 - ID4_ SINE ID -28 55 3 1 787 486 0 0 0 chr15 26507783 26507837 -76987137 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 787 305 192 19 39 chr15 26508127 26508230 -76986744 + (TTATA)n Simple_repeat Simple_repeat 5 105 0 1 787 285 274 62 21 chr15 26508502 26508599 -76986375 + MTEa LTR MaLR 278 378 -1 1 787 503 230 0 0 chr15 26508766 26508853 -76986121 + URR1B DNA MER1_type 7 93 -132 1 787 591 50 182 0 chr15 26508853 26508952 -76986022 - L1_Mus2 LINE L1 -387 6179 6063 1 787 1528 115 30 0 chr15 26508955 26509190 -76985784 + L1_Mus4 LINE L1 6393 6634 -2 1 787 996 109 0 0 chr15 26509209 26509356 -76985618 + URR1B DNA MER1_type 79 225 0 1 787 22 35 0 0 chr15 26509536 26509565 -76985409 + AT_rich Low_complexity Low_complexity 1 29 0 1 787 408 40 0 0 chr15 26510087 26510137 -76984837 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 787 204 185 0 0 chr15 26511160 26511214 -76983760 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 787 1532 289 7 50 chr15 26511623 26512187 -76982787 - Lx8 LINE L1 -793 6680 6141 2 787 642 329 40 55 chr15 26512386 26512711 -76982263 + MLT1A LTR MaLR 51 370 -4 2 787 25 31 0 0 chr15 26512720 26512752 -76982222 + AT_rich Low_complexity Low_complexity 1 32 0 2 787 1059 245 69 0 chr15 26512752 26513042 -76981932 - Lx5 LINE L1 -3 7047 6738 2 787 1285 134 38 29 chr15 26513324 26513563 -76981411 + RLTR11B LTR ERVK 212 452 -1 2 787 285 331 24 16 chr15 26514965 26515091 -76979883 - MER5B DNA MER1_type -50 128 2 1 787 915 80 20 0 chr15 26515201 26515352 -76979622 + (TCTA)n Simple_repeat Simple_repeat 4 157 0 2 787 595 218 8 8 chr15 26516896 26517030 -76977944 + Lx9 LINE L1 7042 7175 -469 2 787 245 282 26 0 chr15 26517053 26517066 -76977908 + (TATG)n Simple_repeat Simple_repeat 4 16 0 2 787 306 0 0 0 chr15 26517066 26517100 -76977874 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 787 245 282 26 0 chr15 26517100 26517164 -76977810 + (TATG)n Simple_repeat Simple_repeat 2 67 0 3 787 338 411 28 19 chr15 26517319 26517530 -76977444 + MLT1F2 LTR MaLR 1 213 -347 3 787 504 286 29 49 chr15 26517559 26517811 -76977163 + MLT1F2 LTR MaLR 396 622 -2 3 787 1970 186 52 8 chr15 26519387 26519787 -76975187 - MTC LTR MaLR -2 419 2 3 787 277 283 14 68 chr15 26520496 26520644 -76974330 + GA-rich Low_complexity Low_complexity 3 142 0 3 787 487 289 83 18 chr15 26522057 26522226 -76972748 - B3A SINE B2 -15 183 4 3 787 1644 35 0 0 chr15 26522710 26522909 -76972065 - MTB LTR MaLR -196 204 6 3 787 923 89 7 0 chr15 26522926 26523061 -76971913 + (TTTC)n Simple_repeat Simple_repeat 4 139 0 3 787 856 268 9 14 chr15 26524262 26524474 -76970500 - B3 SINE B2 -5 211 1 3 787 255 260 20 30 chr15 26526383 26526482 -76968492 + (CATA)n Simple_repeat Simple_repeat 3 100 0 3 787 3203 71 0 2 chr15 26527104 26527512 -76967462 + MTB_Mm LTR MaLR 1 407 0 3 787 391 338 53 66 chr15 26529529 26529681 -76965293 + RSINE1 SINE B4 16 165 0 4 787 709 165 70 28 chr15 26532155 26532298 -76962676 + RMER5 LTR ERV1 59 207 -327 4 787 324 0 0 0 chr15 26532308 26532344 -76962630 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 4 787 962 94 79 7 chr15 26532353 26532493 -76962481 - B2_Mm2 SINE B2 -45 150 1 4 787 1016 259 49 36 chr15 26532493 26532820 -76962154 + RMER5 LTR ERV1 202 532 -2 4 787 191 362 93 28 chr15 26532835 26532943 -76962031 + MIR SINE MIR 18 132 -130 4 787 515 363 60 14 chr15 26533301 26533583 -76961391 + Tigger7 DNA MER2_type 1 295 -2196 4 787 596 295 0 8 chr15 26534277 26534407 -76960567 + RSINE1 SINE B4 4 132 -33 4 787 3536 83 52 10 chr15 26534638 26535159 -76959815 + L1_Mus3 LINE L1 6094 6636 -2 4 787 333 360 104 44 chr15 26535161 26535478 -76959496 - MLT1E1A LTR MaLR -72 608 273 4 787 361 339 153 12 chr15 26535604 26535774 -76959200 + B4A SINE B4 1 194 -98 4 787 212 111 89 0 chr15 26535814 26535859 -76959115 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 5 787 242 186 0 17 chr15 26535894 26535933 -76959041 + polypurine Low_complexity Low_complexity 4 41 0 5 787 1143 119 0 0 chr15 26535933 26536109 -76958865 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 5 787 242 186 0 17 chr15 26536109 26536129 -76958845 + polypurine Low_complexity Low_complexity 42 61 0 5 787 670 194 0 18 chr15 26536588 26536751 -76958223 + CT-rich Low_complexity Low_complexity 1 160 0 5 787 234 0 0 0 chr15 26536752 26536778 -76958196 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 787 773 251 145 6 chr15 26536778 26537115 -76957859 + MER57F LTR ERV1 53 436 0 5 787 788 274 66 0 chr15 26537407 26537604 -76957370 + B3 SINE B2 2 211 -5 5 787 23 0 0 0 chr15 26537702 26537725 -76957249 + AT_rich Low_complexity Low_complexity 1 23 0 5 787 809 85 0 8 chr15 26538564 26538695 -76956279 - L1_Mus4 LINE L1 -7 6629 6500 5 787 1563 109 0 0 chr15 26538695 26538933 -76956041 + L1_Mus4 LINE L1 6003 6240 -396 6 787 751 216 13 13 chr15 26540009 26540168 -76954806 - B2_Mm2 SINE B2 -8 187 29 6 787 432 0 0 0 chr15 26540477 26540525 -76954449 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 787 500 313 60 34 chr15 26540822 26541090 -76953884 - B4A SINE B4 -15 277 3 6 787 214 374 50 12 chr15 26541242 26541402 -76953572 + L2a LINE L2 3261 3426 0 6 787 291 296 0 0 chr15 26541656 26541737 -76953237 + Tigger7 DNA MER2_type 48 128 -2363 6 787 352 330 79 5 chr15 26541745 26541934 -76953040 + Tigger7 DNA MER2_type 2287 2489 -2 4 787 22 0 0 0 chr15 26542443 26542465 -76952509 + AT_rich Low_complexity Low_complexity 1 22 0 6 787 490 255 27 9 chr15 26543289 26543400 -76951574 - B3A SINE B2 -84 114 2 6 787 253 259 0 17 chr15 26544303 26544362 -76950612 + LTR81A LTR ERV1? 164 221 -1129 6 787 297 0 0 0 chr15 26545036 26545069 -76949905 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 6 787 195 42 0 0 chr15 26546250 26546274 -76948700 + (T)n Simple_repeat Simple_repeat 1 24 0 7 787 1161 48 7 0 chr15 26546274 26546419 -76948555 - B1_Mm SINE Alu 0 147 2 7 787 442 308 148 40 chr15 26546781 26547079 -76947895 + MLT1A1 LTR MaLR 1 330 -78 7 787 1267 288 72 112 chr15 26548124 26548749 -76946225 + RLTR18 LTR ERVK 17 616 0 7 787 187 250 327 10 chr15 26551283 26551384 -76943590 + MER5A DNA MER1_type 16 148 -41 7 787 254 327 98 46 chr15 26551394 26551567 -76943407 + MIR SINE MIR 74 255 -7 7 787 204 158 0 0 chr15 26552312 26552350 -76942624 + (TCTG)n Simple_repeat Simple_repeat 3 40 0 7 787 840 224 42 32 chr15 26552350 26552416 -76942558 - B3 SINE B2 -25 191 127 7 787 2185 125 16 6 chr15 26552416 26552739 -76942235 + ORR1A3 LTR MaLR 1 326 0 7 787 840 224 42 32 chr15 26552739 26552861 -76942113 - B3 SINE B2 -90 126 1 7 787 215 260 121 38 chr15 26552875 26553007 -76941967 - MIRb SINE MIR -118 150 8 7 787 617 211 0 22 chr15 26553060 26553244 -76941730 + (TG)n Simple_repeat Simple_repeat 1 180 0 8 787 720 244 71 101 chr15 26553274 26553571 -76941403 - B4 SINE B4 0 292 5 8 787 202 308 30 30 chr15 26553837 26553904 -76941070 - MIRm SINE MIR -13 263 197 8 787 535 351 0 0 chr15 26555075 26555226 -76939748 - RSINE1 SINE B4 0 165 15 8 787 334 330 0 28 chr15 26555405 26555511 -76939463 - B4A SINE B4 -8 284 182 8 787 300 294 87 8 chr15 26558255 26558382 -76936592 + MLT1B LTR MaLR 227 363 -27 8 787 22 70 0 0 chr15 26559675 26559718 -76935256 + AT_rich Low_complexity Low_complexity 1 43 0 8 787 306 173 57 161 chr15 26560202 26560326 -76934648 - MER57C2 LTR ERV1 -105 329 219 8 787 454 0 0 0 chr15 26560361 26560421 -76934553 + L1Md_A LINE L1 6523 6582 0 8 787 500 295 33 7 chr15 26561136 26561286 -76933688 + RSINE1 SINE B4 2 155 -10 8 787 390 176 0 0 chr15 26561987 26562072 -76932902 + CT-rich Low_complexity Low_complexity 4 88 0 9 787 763 207 0 0 chr15 26562080 26562215 -76932759 - B1_Mur1 SINE Alu -13 136 2 9 787 268 355 37 23 chr15 26562972 26563188 -76931786 + Lx8 LINE L1 7105 7323 -150 9 787 494 308 141 21 chr15 26563470 26563712 -76931262 + MLT2C1 LTR ERVL 3 273 -124 9 787 213 94 0 0 chr15 26563761 26563793 -76931181 + (T)n Simple_repeat Simple_repeat 1 32 0 9 787 251 75 0 0 chr15 26563795 26563835 -76931139 - B1_Mur4 SINE Alu 0 150 111 9 787 204 61 19 75 chr15 26563984 26564037 -76930937 + T-rich Low_complexity Low_complexity 4 53 0 9 787 672 264 65 23 chr15 26566615 26566832 -76928142 + ERVL-E-int LTR ERVL 4057 4282 -1385 9 787 648 291 62 18 chr15 26566833 26567060 -76927914 - MTD LTR MaLR -182 237 1 9 787 321 118 0 0 chr15 26567122 26567173 -76927801 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 787 236 311 0 0 chr15 26567396 26567457 -76927517 - Cheshire DNA MER1_type 0 2420 2360 1 787 446 143 65 0 chr15 26568755 26568832 -76926142 + HAL1-3A_ME LINE L1 1968 2049 -809 1 787 400 98 24 24 chr15 26568832 26568916 -76926058 + (CAGAGA)n Simple_repeat Simple_repeat 1 84 0 1 787 315 0 0 0 chr15 26569284 26569319 -76925655 + (A)n Simple_repeat Simple_repeat 1 35 0 1 787 2766 62 69 5 chr15 26572960 26573349 -76921625 - L1_Mus3 LINE L1 -4 6634 6221 1 787 776 40 10 0 chr15 26574183 26574283 -76920691 + (TCC)n Simple_repeat Simple_repeat 1 101 0 1 787 243 367 56 21 chr15 26574561 26574703 -76920271 - MLT1C LTR MaLR -2 465 319 1 787 198 103 0 0 chr15 26575067 26575096 -76919878 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 787 441 54 0 0 chr15 26575186 26575242 -76919732 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 787 198 103 0 0 chr15 26575828 26575857 -76919117 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 787 232 250 0 0 chr15 26576478 26576534 -76918440 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 787 2292 130 36 24 chr15 26576650 26577061 -76917913 - Lx2 LINE L1 -82 6915 6500 1 787 1479 217 49 47 chr15 26577394 26577844 -76917130 - Lx7 LINE L1 0 7696 7246 1 787 621 295 33 5 chr15 26577870 26578073 -76916901 + B3A SINE B2 2 216 0 1 787 342 0 0 0 chr15 26578767 26578805 -76916169 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1 787 2425 99 0 8 chr15 26578805 26579181 -76915793 - L1_Mus4 LINE L1 -22 6614 6242 1 787 502 211 32 0 chr15 26579626 26579749 -76915225 - Lx5 LINE L1 0 7050 6924 1 787 405 0 0 0 chr15 26580344 26580389 -76914585 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 787 21 36 0 0 chr15 26580594 26580622 -76914352 + AT_rich Low_complexity Low_complexity 1 28 0 1 787 394 89 15 5 chr15 26580784 26580854 -76914120 + L1Md_F2 LINE L1 5541 5615 -559 1 787 8114 47 2 0 chr15 26580854 26581848 -76913126 + L1Md_F2 LINE L1 5587 6582 0 1 787 357 43 0 0 chr15 26582130 26582177 -76912797 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 787 396 0 0 0 chr15 26582177 26582220 -76912754 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 787 477 0 0 0 chr15 26584208 26584261 -76910713 + (T)n Simple_repeat Simple_repeat 1 53 0 1 787 285 98 0 0 chr15 26585394 26585435 -76909539 + (A)n Simple_repeat Simple_repeat 1 41 0 1 787 504 48 0 0 chr15 26586098 26586161 -76908813 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 787 225 0 0 0 chr15 26586463 26586488 -76908486 + (CTAAA)n Simple_repeat Simple_repeat 3 27 0 1 787 264 191 14 42 chr15 26586774 26586845 -76908129 + (CATATA)n Simple_repeat Simple_repeat 1 69 0 1 787 487 279 78 42 chr15 26586951 26587142 -76907832 + B3A SINE B2 1 198 0 1 787 207 255 21 0 chr15 26587451 26587498 -76907476 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 787 189 331 119 31 chr15 26587972 26588165 -76906809 - MIRb SINE MIR -37 231 22 1 787 23 0 0 0 chr15 26588491 26588514 -76906460 + AT_rich Low_complexity Low_complexity 1 23 0 1 787 640 268 38 13 chr15 26588526 26588685 -76906289 - B3 SINE B2 -4 212 50 1 787 219 69 0 0 chr15 26588712 26588741 -76906233 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 787 250 316 103 112 chr15 26591313 26591420 -76903554 - B1_Mur1 SINE Alu -9 111 6 1 787 853 350 45 35 chr15 26592590 26593017 -76901957 + MLT2B2 LTR ERVL 13 443 -72 1 787 1022 90 17 11 chr15 26593036 26593215 -76901759 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 1 787 336 330 74 64 chr15 26593983 26594281 -76900693 + Tigger15a DNA TcMar 314 614 -101 1 787 450 261 62 19 chr15 26594614 26594774 -76900200 + Lx6 LINE L1 7058 7224 -236 1 787 1176 97 0 0 chr15 26594776 26595032 -76899942 + (GGA)n Simple_repeat Simple_repeat 1 256 0 1 787 587 343 34 0 chr15 26595042 26595246 -76899728 + B3 SINE B2 1 211 -5 1 787 397 312 145 82 chr15 26595413 26595744 -76899230 + MLT1F2 LTR MaLR 201 552 -8 1 787 600 14 0 0 chr15 26596417 26596486 -76898488 + (TTTTA)n Simple_repeat Simple_repeat 2 70 0 1 787 244 367 16 32 chr15 26596882 26597006 -76897968 - Tigger5 DNA MER2_type -2162 244 123 1 787 369 0 0 0 chr15 26598996 26599037 -76895937 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 787 371 113 0 16 chr15 26599378 26599441 -76895533 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 1 787 478 241 74 47 chr15 26599460 26599608 -76895366 + RSINE1 SINE B4 1 152 -13 1 787 1033 304 54 25 chr15 26600514 26600882 -76894092 - MTE2a LTR MaLR 0 379 1 1 787 23 54 0 0 chr15 26601192 26601229 -76893745 + AT_rich Low_complexity Low_complexity 1 37 0 1 787 250 313 86 17 chr15 26601684 26601801 -76893173 + L2a LINE L2 3301 3425 -1 1 787 450 0 0 0 chr15 26601838 26601888 -76893086 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 1 787 352 303 0 22 chr15 26602358 26602537 -76892437 + CT-rich Low_complexity Low_complexity 4 178 0 1 787 340 341 11 0 chr15 26602539 26602630 -76892344 + polypyrimidine Low_complexity Low_complexity 5 96 0 1 787 625 64 10 21 chr15 26602630 26602726 -76892248 + (TTCTC)n Simple_repeat Simple_repeat 4 98 0 1 787 294 270 0 0 chr15 26603014 26603077 -76891897 - MER20 DNA MER1_type -154 65 3 1 98 36243 32 1 0 chr15 26604590 26611662 -76883312 - L1Md_T LINE L1 0 6585 1 1 788 779 242 0 18 chr15 26613806 26613974 -76881000 + ORR1E LTR MaLR 4 168 -191 1 788 27 0 0 0 chr15 26614320 26614347 -76880627 + AT_rich Low_complexity Low_complexity 1 27 0 1 788 1944 179 27 13 chr15 26614564 26614937 -76880037 + ORR1C1 LTR MaLR 1 378 0 1 788 298 184 77 26 chr15 26614994 26615072 -76879902 + RLTR25B LTR ERVK 428 509 -519 1 788 809 48 0 0 chr15 26615009 26615112 -76879862 + B1_Mus2 SINE Alu 42 144 -3 1 788 315 0 0 0 chr15 26615112 26615147 -76879827 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 788 923 174 81 10 chr15 26616778 26616987 -76877987 - URR1A DNA MER1_type 0 226 3 1 788 21 0 0 0 chr15 26617087 26617108 -76877866 + AT_rich Low_complexity Low_complexity 1 21 0 1 788 657 238 0 0 chr15 26617118 26617282 -76877692 + (TA)n Simple_repeat Simple_repeat 1 164 0 1 788 2713 217 118 4 chr15 26619762 26620479 -76874495 + Lx7 LINE L1 6531 7329 -367 1 788 348 211 0 0 chr15 26620481 26620557 -76874417 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 1 788 391 261 11 53 chr15 26620593 26620783 -76874191 + Lx7 LINE L1 7515 7696 0 1 788 373 260 28 112 chr15 26621219 26621362 -76873612 - Lx8 LINE L1 -131 7342 7212 1 788 510 162 124 0 chr15 26621477 26621582 -76873392 + Lx8 LINE L1 7026 7143 -330 1 788 536 247 109 90 chr15 26621876 26622075 -76872899 + B3 SINE B2 12 216 0 1 788 358 94 15 15 chr15 26623371 26623436 -76871538 + (GGAA)n Simple_repeat Simple_repeat 3 67 0 1 788 315 177 0 0 chr15 26623495 26623557 -76871417 + (TATG)n Simple_repeat Simple_repeat 1 62 0 1 788 587 265 22 22 chr15 26623569 26623704 -76871270 - RSINE1 SINE B4 -20 145 11 1 788 279 302 62 40 chr15 26624005 26624229 -76870745 + L1ME1 LINE L1 5877 6105 -74 1 788 23 54 0 0 chr15 26624317 26624354 -76870620 + AT_rich Low_complexity Low_complexity 1 37 0 1 788 883 346 64 29 chr15 26624671 26625216 -76869758 + MER63C DNA AcHobo 208 771 -159 1 788 22 56 0 0 chr15 26625227 26625263 -76869711 + AT_rich Low_complexity Low_complexity 1 36 0 1 788 230 259 19 0 chr15 26625693 26625747 -76869227 + MER115 DNA Tip100 485 539 -154 1 788 288 0 0 0 chr15 26626151 26626183 -76868791 + (T)n Simple_repeat Simple_repeat 1 32 0 1 788 198 0 0 0 chr15 26626781 26626803 -76868171 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 788 609 320 22 35 chr15 26628382 26628609 -76866365 - MER2 DNA MER2_type -1 344 121 1 788 238 281 0 0 chr15 26628641 26628698 -76866276 + RSINE1 SINE B4 5 61 -104 1 788 699 65 0 0 chr15 26629278 26629371 -76865603 + (GA)n Simple_repeat Simple_repeat 2 94 0 1 788 279 304 45 53 chr15 26630411 26630456 -76864518 + MER58A DNA MER1_type 47 89 -135 1 788 288 0 0 0 chr15 26630456 26630488 -76864486 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 788 279 304 45 53 chr15 26630488 26630574 -76864400 + MER58A DNA MER1_type 90 177 -47 1 788 355 278 0 0 chr15 26630624 26630721 -76864253 - MLT1D LTR MaLR -2 503 407 1 788 360 0 0 0 chr15 26630722 26630762 -76864212 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 788 307 267 79 55 chr15 26630875 26631002 -76863972 - MLT1D LTR MaLR -485 142 13 1 788 212 328 92 82 chr15 26632006 26632202 -76862772 - L2a LINE L2 -297 3129 2932 1 788 225 0 0 0 chr15 26635508 26635533 -76859441 + (A)n Simple_repeat Simple_repeat 1 25 0 1 788 2824 159 15 35 chr15 26635642 26636178 -76858796 + RLTR11A LTR ERVK 4 528 0 1 788 207 209 0 0 chr15 26636224 26636267 -76858707 + A-rich Low_complexity Low_complexity 1 43 0 1 788 228 244 0 0 chr15 26637014 26637055 -76857919 + B3A SINE B2 40 80 -118 1 788 255 221 0 0 chr15 26637077 26637145 -76857829 + T-rich Low_complexity Low_complexity 1 68 0 1 788 315 152 0 0 chr15 26637156 26637215 -76857759 + B3 SINE B2 157 215 -1 1 788 309 51 0 0 chr15 26637821 26637860 -76857114 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1 788 308 270 126 29 chr15 26638549 26638652 -76856322 + RSINE1 SINE B4 49 161 -4 1 788 356 354 72 23 chr15 26638689 26638993 -76855981 - BLACKJACK DNA AcHobo -1694 1250 932 1 788 378 17 33 17 chr15 26639971 26640031 -76854943 + (CAAAA)n Simple_repeat Simple_repeat 5 65 0 1 788 368 285 105 20 chr15 26640126 26640373 -76854601 + BLACKJACK DNA AcHobo 2315 2582 -362 1 788 249 242 12 6 chr15 26640979 26641145 -76853829 + (CA)n Simple_repeat Simple_repeat 2 168 0 1 788 658 136 6 25 chr15 26641188 26641347 -76853627 + (CA)n Simple_repeat Simple_repeat 2 157 0 1 788 1228 149 47 0 chr15 26643015 26643230 -76851744 - URR1B DNA MER1_type 0 225 1 1 788 1380 77 0 6 chr15 26643706 26643889 -76851085 - B2_Mm2 SINE B2 -7 188 7 1 788 460 195 0 65 chr15 26644236 26644329 -76850645 - PB1D9 SINE Alu -10 110 24 2 788 344 226 8 0 chr15 26644573 26644697 -76850277 + (TG)n Simple_repeat Simple_repeat 2 126 0 2 788 197 219 0 14 chr15 26644742 26644816 -76850158 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 788 420 227 17 0 chr15 26644862 26645038 -76849936 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 788 429 20 0 0 chr15 26645883 26645933 -76849041 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 788 373 342 72 34 chr15 26647426 26647662 -76847312 + Lx8 LINE L1 7115 7359 -114 2 788 285 128 0 0 chr15 26648449 26648496 -76846478 + (T)n Simple_repeat Simple_repeat 1 47 0 2 788 183 294 0 0 chr15 26649544 26649595 -76845379 - MIRc SINE MIR -111 157 107 2 788 633 176 33 33 chr15 26649886 26650039 -76844935 - Lx4B LINE L1 -1 7057 6905 2 788 292 341 34 0 chr15 26651360 26651448 -76843526 - MER2B DNA MER2_type -8 328 238 2 788 322 165 165 62 chr15 26651698 26651712 -76843262 - B1_Mur4 SINE Alu -1 149 138 2 788 270 0 0 0 chr15 26651712 26651742 -76843232 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2 788 378 158 171 0 chr15 26651742 26651824 -76843150 - B1_Mus2 SINE Alu -10 137 42 2 788 262 245 26 32 chr15 26651854 26652010 -76842964 + (TCTCTG)n Simple_repeat Simple_repeat 4 158 0 2 788 220 159 21 64 chr15 26652011 26652058 -76842916 - B1_Mus1 SINE Alu -88 60 16 2 788 324 0 0 0 chr15 26652130 26652166 -76842808 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 788 441 0 0 0 chr15 26652582 26652631 -76842343 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 788 585 255 70 25 chr15 26652786 26652943 -76842031 - RSINE1 SINE B4 0 165 2 2 788 243 0 0 0 chr15 26653262 26653289 -76841685 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 788 843 26 9 0 chr15 26653624 26653738 -76841236 - L1Md_T LINE L1 -1 6581 6467 2 788 2852 28 0 3 chr15 26653739 26654093 -76840881 + L1Md_A LINE L1 6144 6496 -86 2 788 196 309 38 76 chr15 26657340 26657445 -76837529 - MIRb SINE MIR -123 145 45 2 788 1174 196 23 9 chr15 26657809 26658030 -76836944 - MTD LTR MaLR 0 419 196 2 788 712 250 7 0 chr15 26659471 26659615 -76835359 - MTD LTR MaLR -209 210 66 2 788 425 317 73 63 chr15 26661790 26662076 -76832898 + B4A SINE B4 2 290 -2 2 788 393 265 63 69 chr15 26662158 26662323 -76832651 + MLT1J1 LTR MaLR 67 205 -243 2 788 637 253 93 7 chr15 26663107 26663258 -76831716 - B3A SINE B2 -33 165 2 2 788 468 0 0 0 chr15 26663869 26663921 -76831053 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 2 788 1493 290 83 18 chr15 26664276 26665211 -76829763 - L1MA5 LINE L1 -4 6296 5303 2 788 341 75 19 0 chr15 26665221 26665274 -76829700 + (TTCC)n Simple_repeat Simple_repeat 2 55 0 2 788 479 350 22 22 chr15 26665819 26666000 -76828974 + B3 SINE B2 8 188 -28 2 788 21 0 0 0 chr15 26666232 26666253 -76828721 + AT_rich Low_complexity Low_complexity 1 21 0 2 788 518 355 23 28 chr15 26666805 26667022 -76827952 - ID_B1 SINE B4 -7 217 2 2 788 6051 48 43 10 chr15 26667034 26667817 -76827157 - L1Md_F2 LINE L1 0 6582 5774 2 788 3209 108 9 2 chr15 26668335 26668797 -76826177 - L1_Mus3 LINE L1 -6 6632 6168 2 788 2952 43 3 5 chr15 26669444 26669814 -76825160 - L1Md_F2 LINE L1 0 6582 6214 2 788 216 0 0 0 chr15 26669815 26669839 -76825135 + (T)n Simple_repeat Simple_repeat 1 24 0 2 788 1164 82 0 0 chr15 26669839 26669986 -76824988 - B1_Mus1 SINE Alu 0 148 2 2 788 1102 93 0 0 chr15 26670437 26670577 -76824397 + B1_Mm SINE Alu 2 141 -6 2 788 284 48 24 0 chr15 26670580 26670622 -76824352 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2 788 326 252 29 94 chr15 26672658 26672717 -76822257 + Lx7 LINE L1 7162 7219 -477 2 788 207 0 0 0 chr15 26672717 26672740 -76822234 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 788 326 252 29 94 chr15 26672740 26672851 -76822123 + Lx7 LINE L1 7220 7321 -375 2 788 220 182 0 35 chr15 26672851 26672908 -76822066 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 2 788 283 141 31 0 chr15 26672952 26673016 -76821958 + CT-rich Low_complexity Low_complexity 3 68 0 2 788 4088 71 90 0 chr15 26674001 26674537 -76820437 + MT2B2 LTR ERVL 1 584 0 2 788 452 241 34 59 chr15 26674741 26674860 -76820114 + ID_B1 SINE B4 100 215 -9 2 788 387 0 0 0 chr15 26674982 26675025 -76819949 + (TC)n Simple_repeat Simple_repeat 2 44 0 2 788 438 167 0 0 chr15 26675054 26675138 -76819836 + (CA)n Simple_repeat Simple_repeat 1 84 0 2 788 225 0 0 0 chr15 26675362 26675387 -76819587 + (GGAA)n Simple_repeat Simple_repeat 1 25 0 2 788 345 276 197 0 chr15 26675390 26675591 -76819383 + MER2 DNA MER2_type 92 332 -13 2 788 276 294 52 67 chr15 26675591 26675700 -76819274 + ORR1E LTR MaLR 1 112 -247 2 788 1101 81 0 7 chr15 26675700 26675849 -76819125 + B1_Mus1 SINE Alu 1 148 0 2 788 276 294 52 67 chr15 26675849 26675874 -76819100 + ORR1E LTR MaLR 113 133 -226 2 788 269 276 50 86 chr15 26675963 26676102 -76818872 + ORR1E LTR MaLR 237 370 -9 2 788 210 91 0 0 chr15 26677936 26677969 -76817005 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 2 788 300 246 87 0 chr15 26677977 26678046 -76816928 - ID4_ SINE ID -4 79 5 2 788 424 253 136 34 chr15 26678072 26678248 -76816726 - B3A SINE B2 -4 194 1 2 788 229 257 9 36 chr15 26679253 26679482 -76815492 + GA-rich Low_complexity Low_complexity 1 222 0 2 788 318 167 0 0 chr15 26679507 26679567 -76815407 + GA-rich Low_complexity Low_complexity 2 61 0 2 788 1189 68 0 0 chr15 26679937 26680083 -76814891 - B1_Mm SINE Alu -1 146 1 2 788 734 247 40 20 chr15 26681079 26681277 -76813697 - B3 SINE B2 -13 203 2 2 788 22 35 0 0 chr15 26681349 26681378 -76813596 + AT_rich Low_complexity Low_complexity 1 29 0 2 788 897 264 228 12 chr15 26681454 26681875 -76813099 - RMER5 LTR ERV1 -10 524 13 2 788 21 0 0 0 chr15 26682810 26682831 -76812143 + AT_rich Low_complexity Low_complexity 1 21 0 2 788 22 35 0 0 chr15 26683521 26683550 -76811424 + AT_rich Low_complexity Low_complexity 1 29 0 2 788 1118 75 7 7 chr15 26683903 26684050 -76810924 + B1_Mus2 SINE Alu 1 147 0 2 788 234 0 0 0 chr15 26684054 26684080 -76810894 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 788 193 208 114 89 chr15 26685443 26685522 -76809452 - L3 LINE CR1 -68 4421 4341 2 788 486 0 0 0 chr15 26686676 26686730 -76808244 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 788 557 147 500 0 chr15 26687256 26687406 -76807568 - URR1A DNA MER1_type -1 225 1 2 788 314 285 144 69 chr15 26688521 26688826 -76806148 - L1ME1 LINE L1 -146 6033 5706 2 788 410 325 120 25 chr15 26689400 26689757 -76805217 - L1MD LINE L1 -2258 5737 5347 2 788 778 317 50 43 chr15 26690068 26690654 -76804320 - L1_Mur3 LINE L1 -88 5792 5203 2 788 440 343 75 63 chr15 26690889 26691144 -76803830 - B4 SINE B4 -32 260 3 2 788 267 31 0 0 chr15 26691329 26691361 -76803613 + (A)n Simple_repeat Simple_repeat 1 32 0 2 788 251 279 69 43 chr15 26691365 26691481 -76803493 - L1MC LINE L1 -1305 4841 4723 2 788 215 321 131 16 chr15 26693160 26693339 -76801635 + MIRb SINE MIR 2 200 -68 2 788 336 308 82 19 chr15 26694685 26694844 -76800130 + MIR SINE MIR 30 198 -64 2 788 509 309 43 0 chr15 26695929 26696005 -76798969 + ID SINE ID 2 84 -140 2 788 245 274 104 0 chr15 26696005 26696111 -76798863 + PB1D10 SINE Alu 1 117 0 2 788 295 240 0 19 chr15 26696111 26696217 -76798757 + GA-rich Low_complexity Low_complexity 1 104 0 2 788 261 367 96 53 chr15 26696745 26696932 -76798042 + B3 SINE B2 5 199 -17 2 788 231 152 0 0 chr15 26696947 26696993 -76797981 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 788 233 380 14 0 chr15 26697064 26697135 -76797839 + ID2 SINE ID 3 74 -9 2 788 378 0 0 0 chr15 26697528 26697570 -76797404 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 2 788 270 169 31 73 chr15 26698050 26698146 -76796828 + RMER10B LTR ERVL 201 292 -106 2 788 432 0 0 0 chr15 26698146 26698194 -76796780 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 788 629 286 91 33 chr15 26698634 26698962 -76796012 - MLT2B4 LTR ERVL -58 356 15 2 788 471 306 79 106 chr15 26699477 26699817 -76795157 + MLT1C LTR MaLR 1 331 -136 2 788 317 278 22 0 chr15 26700915 26701005 -76793969 - MER5A1 DNA MER1_type -5 161 70 2 788 220 292 123 14 chr15 26701651 26701797 -76793177 + MIRb SINE MIR 80 241 -27 2 788 210 321 145 7 chr15 26702188 26702326 -76792648 - L3 LINE CR1 -2269 2220 2064 2 788 352 344 39 43 chr15 26702549 26702804 -76792170 + Tigger13a DNA MER2_type 489 742 -29 2 788 1359 57 0 17 chr15 26703722 26703901 -76791073 - L1_Mus1 LINE L1 0 6567 6392 2 788 3214 40 31 0 chr15 26703902 26704322 -76790652 + L1_Mus1 LINE L1 5679 6111 -456 2 788 219 114 0 0 chr15 26704391 26704426 -76790548 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2 788 745 258 20 16 chr15 26704530 26704778 -76790196 - Lx8 LINE L1 -383 7090 6842 2 788 239 106 43 0 chr15 26706451 26706498 -76788476 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 2 788 26 82 0 0 chr15 26706787 26706848 -76788126 + AT_rich Low_complexity Low_complexity 1 61 0 2 788 248 194 0 53 chr15 26707862 26707993 -76786981 + GA-rich Low_complexity Low_complexity 1 124 0 2 788 577 317 34 43 chr15 26711060 26711268 -76783706 + B4A SINE B4 80 285 -7 2 788 912 309 23 75 chr15 26712038 26712099 -76782875 + B4A SINE B4 1 62 -230 2 788 4238 49 0 13 chr15 26712099 26712634 -76782340 + L1Md_F2 LINE L1 6055 6582 0 2 788 912 309 23 75 chr15 26712634 26712880 -76782094 + B4A SINE B4 63 292 0 2 788 1149 62 7 0 chr15 26713802 26713947 -76781027 - B1_Mus2 SINE Alu 0 147 2 2 788 645 128 0 0 chr15 26714859 26714961 -76780013 + (GGAA)n Simple_repeat Simple_repeat 2 103 0 2 788 335 343 9 0 chr15 26715694 26715799 -76779175 + PB1D10 SINE Alu 1 106 -11 2 788 582 230 115 0 chr15 26716672 26716811 -76778163 + B3A SINE B2 3 157 -41 3 788 252 0 0 0 chr15 26716827 26716855 -76778119 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 788 32 0 0 0 chr15 26717346 26717378 -76777596 + AT_rich Low_complexity Low_complexity 1 32 0 3 788 496 367 58 0 chr15 26719842 26720049 -76774925 + MER20 DNA MER1_type 1 219 0 3 788 413 359 68 49 chr15 26720489 26720694 -76774280 + MLT1E LTR MaLR 436 644 -9 3 788 721 346 98 9 chr15 26720804 26721139 -76773835 + MLT1A0 LTR MaLR 1 365 0 3 788 202 301 66 74 chr15 26721538 26721660 -76773314 + MIR3 SINE MIR 81 201 -7 3 788 642 227 50 0 chr15 26722095 26722236 -76772738 - B1_Mur1 SINE Alu 0 149 2 3 788 208 241 0 0 chr15 26723532 26723590 -76771384 + A-rich Low_complexity Low_complexity 1 58 0 3 788 1060 312 75 25 chr15 26724669 26725109 -76769865 - MLT1C LTR MaLR 0 467 6 3 788 288 111 0 0 chr15 26725442 26725487 -76769487 + (CTG)n Simple_repeat Simple_repeat 3 47 0 3 788 336 24 0 0 chr15 26726359 26726400 -76768574 + (TAA)n Simple_repeat Simple_repeat 1 41 0 3 788 186 103 0 0 chr15 26726864 26726893 -76768081 + (TA)n Simple_repeat Simple_repeat 1 29 0 3 788 384 318 71 108 chr15 26726966 26727234 -76767740 - ORR1E LTR MaLR -51 308 51 3 788 504 0 0 0 chr15 26727841 26727897 -76767077 + (TAGA)n Simple_repeat Simple_repeat 4 59 0 3 788 1280 75 116 0 chr15 26728076 26728249 -76766725 + B2_Mm2 SINE B2 2 194 -1 3 788 320 206 12 88 chr15 26728461 26728541 -76766433 - MTE2b LTR MaLR 0 379 306 3 788 846 269 50 14 chr15 26728555 26728774 -76766200 - MTE2b LTR MaLR -128 251 25 3 788 799 332 118 66 chr15 26730409 26730970 -76764004 - MER21B LTR ERV1 -271 592 3 3 788 927 150 81 0 chr15 26731279 26731452 -76763522 + B2_Mm2 SINE B2 1 187 -8 3 788 189 107 0 0 chr15 26732403 26732431 -76762543 + (ATTG)n Simple_repeat Simple_repeat 1 28 0 3 788 999 117 0 0 chr15 26732440 26732620 -76762354 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 788 473 324 170 0 chr15 26732630 26732877 -76762097 - B4A SINE B4 -2 290 2 3 788 2405 70 3 3 chr15 26734946 26735245 -76759729 - L1_Mus2 LINE L1 0 6566 6268 3 788 477 0 0 0 chr15 26735737 26735790 -76759184 + (TAAA)n Simple_repeat Simple_repeat 4 56 0 3 788 189 358 72 7 chr15 26735996 26736134 -76758840 - MIRb SINE MIR -30 238 92 3 788 264 240 20 0 chr15 26738023 26738073 -76756901 - ID4_ SINE ID -2 81 31 3 788 29 0 0 0 chr15 26738228 26738257 -76756717 + AT_rich Low_complexity Low_complexity 1 29 0 3 788 509 44 15 0 chr15 26738323 26738391 -76756583 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 3 788 575 329 48 10 chr15 26738433 26738642 -76756332 + Lx9 LINE L1 6364 6580 -1064 3 98 226 234 51 25 chr15 26738648 26738727 -76756247 + Lx9 LINE L1 6702 6782 -862 3 789 1312 180 31 82 chr15 26738727 26739058 -76755916 - ORR1C2 LTR MaLR -65 305 1 3 789 216 67 0 0 chr15 26739798 26739828 -76755146 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 789 2899 39 45 6 chr15 26740015 26740348 -76754626 + ORR1A1 LTR MaLR 1 346 0 3 789 635 253 160 11 chr15 26740740 26740928 -76754046 + B3 SINE B2 1 216 0 3 789 1374 303 58 2 chr15 26740964 26741397 -76753577 + Lx8 LINE L1 6416 6872 -601 3 789 238 309 43 0 chr15 26741583 26741677 -76753297 + Lx8 LINE L1 7155 7252 -221 3 789 516 213 79 79 chr15 26741717 26741884 -76753090 + Lx4A LINE L1 6876 7042 -16 3 789 261 0 0 0 chr15 26741884 26741913 -76753061 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 3 789 2022 192 62 22 chr15 26742004 26742409 -76752565 - MTC LTR MaLR 0 421 1 3 789 200 378 0 0 chr15 26742552 26742626 -76752348 + GA-rich Low_complexity Low_complexity 4 77 0 3 789 932 121 6 17 chr15 26744640 26744816 -76750158 + (GGAA)n Simple_repeat Simple_repeat 1 174 0 3 789 1103 189 25 15 chr15 26746821 26747025 -76747949 + B3 SINE B2 6 211 -5 3 789 931 286 48 10 chr15 26747134 26747427 -76747547 + Lx8 LINE L1 6778 7081 -392 3 789 595 343 11 0 chr15 26747438 26747616 -76747358 - Lx8 LINE L1 -179 7294 7115 3 789 4049 141 72 50 chr15 26748174 26748233 -76746741 + RMER6A LTR ERVK 1 59 -697 3 789 369 0 0 0 chr15 26748233 26748274 -76746700 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 789 210 37 0 0 chr15 26748274 26748301 -76746673 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 789 4049 141 72 50 chr15 26748301 26748444 -76746530 + RMER6A LTR ERVK 60 214 -542 3 789 1460 89 5 5 chr15 26748444 26748635 -76746339 + B2_Mm2 SINE B2 1 191 -4 3 789 4049 141 72 50 chr15 26748635 26749170 -76745804 + RMER6A LTR ERVK 215 755 -1 3 789 1233 224 175 3 chr15 26750550 26750864 -76744110 - ORR1D1 LTR MaLR -6 368 1 3 789 320 0 25 0 chr15 26753238 26753278 -76741696 + (CAAAAA)n Simple_repeat Simple_repeat 1 41 0 3 789 882 240 0 20 chr15 26753882 26754078 -76740896 + B3A SINE B2 1 192 -6 3 789 271 362 103 8 chr15 26754958 26755075 -76739899 - MER20 DNA MER1_type 0 219 92 3 789 607 337 213 45 chr15 26755315 26755672 -76739302 + MER70B LTR ERVL 23 439 -139 3 789 1062 269 95 9 chr15 26755685 26756012 -76738962 - ORR1E LTR MaLR -4 355 1 3 789 632 260 152 43 chr15 26756024 26756281 -76738693 - ORR1E-int LTR MaLR -13 1357 1073 3 789 1710 188 17 3 chr15 26756291 26756590 -76738384 + RLTR20B1 LTR ERVK 1 303 -260 3 789 368 260 137 46 chr15 26757004 26757072 -76737902 + Lx8 LINE L1 6182 6247 -1226 3 789 225 0 0 0 chr15 26757072 26757097 -76737877 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 789 368 260 137 46 chr15 26757097 26757181 -76737793 + Lx8 LINE L1 6248 6348 -1125 3 789 499 344 109 20 chr15 26757183 26757477 -76737497 - ORR1E-int LTR MaLR -1255 325 6 3 789 23 0 0 0 chr15 26758708 26758731 -76736243 + AT_rich Low_complexity Low_complexity 1 23 0 3 789 436 300 86 0 chr15 26760718 26760858 -76734116 + B4A SINE B4 138 289 -3 3 789 693 279 71 62 chr15 26761152 26761477 -76733497 - RLTR28B LTR ERVL -38 443 116 3 789 801 172 107 35 chr15 26761554 26761723 -76733251 - RMER1C Other Other -8 1334 1154 3 789 22 35 0 0 chr15 26762097 26762126 -76732848 + AT_rich Low_complexity Low_complexity 1 29 0 3 789 277 340 37 9 chr15 26762162 26762269 -76732705 - MIR3 SINE MIR -7 201 92 3 789 1319 279 100 46 chr15 26763206 26763938 -76731036 - Lx5 LINE L1 -1136 5914 5109 3 789 563 254 75 85 chr15 26763963 26764269 -76730705 - L1_Rod LINE L1 -67 5780 5478 3 789 2219 289 102 45 chr15 26764266 26765276 -76729698 + Lx9 LINE L1 6429 7496 -148 3 789 214 95 48 0 chr15 26765276 26765318 -76729656 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 789 414 0 0 0 chr15 26765318 26765363 -76729611 + (GA)n Simple_repeat Simple_repeat 1 46 0 3 789 2219 289 102 45 chr15 26765363 26765468 -76729506 + Lx9 LINE L1 7497 7608 -36 3 789 800 179 0 11 chr15 26765652 26765833 -76729141 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 789 474 171 105 0 chr15 26766080 26766185 -76728789 + B1_Mur4 SINE Alu 35 150 0 3 789 540 0 0 0 chr15 26766187 26766247 -76728727 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 789 1602 309 24 30 chr15 26766250 26766784 -76728190 + Lx8 LINE L1 6212 6742 -731 3 789 887 250 84 63 chr15 26766873 26767282 -76727692 + MLT2B1 LTR ERVL 87 520 0 3 789 489 320 83 42 chr15 26767725 26767966 -76727008 + B4A SINE B4 1 251 -41 3 789 744 218 0 0 chr15 26768614 26768788 -76726186 + (CA)n Simple_repeat Simple_repeat 1 174 0 3 789 756 206 0 0 chr15 26768800 26769064 -76725910 + (CA)n Simple_repeat Simple_repeat 1 264 0 3 789 1892 234 67 17 chr15 26769171 26769632 -76725342 + Lx6 LINE L1 6969 7452 -8 3 789 306 87 0 0 chr15 26769951 26769997 -76724977 + (T)n Simple_repeat Simple_repeat 1 46 0 3 789 523 87 36 0 chr15 26769999 26770089 -76724885 - B1_Mur4 SINE Alu 0 150 14 3 789 2165 101 0 3 chr15 26770100 26770399 -76724575 - Lx3_Mus LINE L1 -111 6898 6601 3 789 193 210 16 16 chr15 26771040 26771103 -76723871 + GA-rich Low_complexity Low_complexity 3 65 0 3 789 263 28 28 0 chr15 26771851 26771887 -76723087 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 3 789 252 214 0 0 chr15 26772473 26772529 -76722445 + (TATATG)n Simple_repeat Simple_repeat 5 60 0 3 789 339 239 10 0 chr15 26772592 26772679 -76722295 - ID4_ SINE ID -61 91 2 3 789 477 311 139 25 chr15 26773335 26773753 -76721221 + MLT2B1 LTR ERVL 2 567 0 3 789 1130 202 132 36 chr15 26773851 26774154 -76720820 - IAPEY3_LTR LTR ERVK 0 332 1 3 789 452 130 0 20 chr15 26774625 26774727 -76720247 + (TCTCTG)n Simple_repeat Simple_repeat 2 101 0 3 789 252 0 0 0 chr15 26774773 26774801 -76720173 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 789 473 301 218 0 chr15 26774885 26775124 -76719850 + Lx8 LINE L1 6869 7159 -314 3 789 242 177 48 0 chr15 26775124 26775186 -76719788 + B3 SINE B2 152 216 0 3 789 297 0 0 0 chr15 26776654 26776687 -76718287 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 789 311 0 93 0 chr15 26777142 26777196 -76717778 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 3 789 691 320 70 15 chr15 26777296 26777569 -76717405 + B4A SINE B4 1 288 -4 3 789 180 0 0 0 chr15 26777576 26777596 -76717378 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 789 384 323 87 45 chr15 26778342 26778539 -76716435 - MER58D DNA MER1_type -19 367 162 3 789 339 25 0 0 chr15 26778539 26778579 -76716395 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 789 384 323 87 45 chr15 26778579 26778715 -76716259 - MER58D DNA MER1_type -225 161 22 3 789 669 391 87 3 chr15 26779621 26779942 -76715032 + MER70B LTR ERVL 3 350 -228 3 789 274 288 0 0 chr15 26780262 26780321 -76714653 - MER33 DNA MER1_type -261 63 5 3 789 3454 51 5 0 chr15 26780490 26780884 -76714090 - MTA_Mm LTR MaLR 0 396 1 3 789 23 78 0 0 chr15 26781101 26781152 -76713822 + AT_rich Low_complexity Low_complexity 1 51 0 3 789 188 35 35 0 chr15 26781241 26781270 -76713704 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 3 789 1158 52 0 0 chr15 26782389 26782543 -76712431 + (TGGA)n Simple_repeat Simple_repeat 2 155 0 3 789 3661 98 49 0 chr15 26783853 26784343 -76710631 + Lx3A LINE L1 6466 6979 -2 3 789 27 29 0 0 chr15 26784404 26784438 -76710536 + AT_rich Low_complexity Low_complexity 1 34 0 4 789 996 87 0 0 chr15 26785019 26785146 -76709828 - L1_Mm LINE L1 -190 5693 5567 4 789 6092 65 8 4 chr15 26785146 26785886 -76709088 + L1_Mus2 LINE L1 5824 6566 0 4 789 294 73 0 0 chr15 26785943 26785984 -76708990 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 789 568 355 64 25 chr15 26786158 26786438 -76708536 + MLT1A0 LTR MaLR 61 351 -14 4 789 1434 138 28 12 chr15 26786675 26786925 -76708049 - Lx LINE L1 -6 6648 6395 4 789 1186 69 21 0 chr15 26787213 26787357 -76707617 + B1_Mus2 SINE Alu 1 147 0 4 789 180 97 0 0 chr15 26788016 26788047 -76706927 + (T)n Simple_repeat Simple_repeat 1 31 0 4 789 26 0 0 0 chr15 26788192 26788218 -76706756 + AT_rich Low_complexity Low_complexity 1 26 0 4 789 22 0 0 0 chr15 26788698 26788720 -76706254 + AT_rich Low_complexity Low_complexity 1 22 0 4 789 2590 183 17 142 chr15 26789677 26790332 -76704642 + RMER19C LTR ERVK 37 609 -2 4 789 225 0 0 0 chr15 26790851 26790876 -76704098 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 4 789 309 223 10 21 chr15 26790904 26791000 -76703974 + (TG)n Simple_repeat Simple_repeat 1 95 0 4 789 1375 286 124 26 chr15 26791028 26791488 -76703486 + L1MC1 LINE L1 5569 6068 -265 4 789 372 43 0 0 chr15 26791488 26791534 -76703440 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 789 1375 286 124 26 chr15 26791534 26791767 -76703207 + L1MC1 LINE L1 6069 6330 -3 4 789 27 0 0 0 chr15 26793655 26793682 -76701292 + AT_rich Low_complexity Low_complexity 1 27 0 4 789 522 291 38 66 chr15 26793803 26794016 -76700958 + B4A SINE B4 2 208 -84 4 789 327 343 144 29 chr15 26794267 26794510 -76700464 + MER68 LTR ERVL 292 562 -1 4 789 24 0 0 0 chr15 26795290 26795314 -76699660 + AT_rich Low_complexity Low_complexity 1 24 0 4 789 226 229 0 0 chr15 26795339 26795387 -76699587 + L1MA7 LINE L1 5709 5756 -535 4 789 469 115 23 0 chr15 26795493 26795580 -76699394 + (GA)n Simple_repeat Simple_repeat 1 89 0 4 789 388 294 115 24 chr15 26795632 26796015 -76698959 + L1MA7 LINE L1 5868 6284 -7 4 789 718 222 109 25 chr15 26796654 26796841 -76698133 - B3A SINE B2 -9 186 1 4 789 872 283 72 44 chr15 26799095 26799413 -76695561 - MTD LTR MaLR -90 329 3 4 789 545 270 80 38 chr15 26799419 26799658 -76695316 - MER44B DNA MER2_type -40 510 262 4 789 4376 64 17 2 chr15 26799684 26800213 -76694761 - Lx3_Mus LINE L1 0 7009 6473 4 789 662 264 91 48 chr15 26800243 26800430 -76694544 + B3A SINE B2 2 196 -2 4 789 594 0 0 0 chr15 26800440 26800506 -76694468 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 4 789 325 248 99 33 chr15 26800679 26800800 -76694174 + B1F SINE Alu 13 141 -8 4 789 348 111 0 0 chr15 26800809 26800863 -76694111 + (CAGG)n Simple_repeat Simple_repeat 1 54 0 4 789 225 324 0 29 chr15 26800867 26800937 -76694037 + ID4_ SINE ID 2 69 -14 4 789 235 358 18 0 chr15 26800953 26801062 -76693912 - MER44B DNA MER2_type -435 115 5 4 789 277 86 17 17 chr15 26801216 26801275 -76693699 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 4 789 324 0 0 0 chr15 26801337 26801373 -76693601 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 4 789 1170 66 0 0 chr15 26801373 26801509 -76693465 - B1_Mus2 SINE Alu -10 137 2 4 789 1829 244 61 80 chr15 26801509 26801940 -76693034 + L1_Rod LINE L1 5014 5438 -409 4 789 434 18 18 0 chr15 26801940 26801995 -76692979 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 4 789 1829 244 61 80 chr15 26801995 26802240 -76692734 + L1_Rod LINE L1 5439 5677 -170 4 789 477 0 0 0 chr15 26802985 26803038 -76691936 + (GA)n Simple_repeat Simple_repeat 1 53 0 4 789 530 282 89 52 chr15 26804410 26804601 -76690373 - B3 SINE B2 -5 211 14 4 789 2305 158 120 102 chr15 26804687 26805238 -76689736 + RMER1B Other Other 504 1064 -2 4 789 426 299 104 0 chr15 26806741 26806875 -76688099 + B1F SINE Alu 1 148 -1 4 789 629 221 63 39 chr15 26809386 26809593 -76685381 - Lx9 LINE L1 -7 7637 7426 4 789 548 305 24 61 chr15 26811043 26811207 -76683767 + RSINE1 SINE B4 8 165 0 4 789 322 344 58 62 chr15 26811259 26811550 -76683424 + B4A SINE B4 1 290 -2 4 789 1223 252 74 9 chr15 26812281 26812617 -76682357 + Lx7 LINE L1 6624 6981 -715 4 789 642 93 18 9 chr15 26812624 26812733 -76682241 + (TA)n Simple_repeat Simple_repeat 1 110 0 4 789 213 39 0 0 chr15 26812749 26812775 -76682199 + (TATAA)n Simple_repeat Simple_repeat 5 30 0 4 789 571 275 35 35 chr15 26812778 26813008 -76681966 + Lx7 LINE L1 7063 7292 -404 4 789 189 0 0 0 chr15 26813025 26813046 -76681928 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 4 789 408 88 0 0 chr15 26813090 26813147 -76681827 + (GA)n Simple_repeat Simple_repeat 1 57 0 4 789 699 211 0 0 chr15 26813233 26813356 -76681618 + Lx6 LINE L1 7010 7132 -328 4 789 1486 268 107 11 chr15 26813357 26813817 -76681157 - RMER20A LTR ERVK -2 514 11 4 789 1059 242 108 0 chr15 26813834 26814111 -76680863 + Lx6 LINE L1 7139 7445 -15 4 789 213 351 0 0 chr15 26814202 26814259 -76680715 - ID4_ SINE ID -16 67 11 4 789 246 203 34 0 chr15 26814451 26814510 -76680464 + A-rich Low_complexity Low_complexity 2 62 0 4 789 3373 73 9 5 chr15 26814831 26815260 -76679714 - L1_Mus3 LINE L1 0 6638 6208 4 789 587 270 7 35 chr15 26816582 26816724 -76678250 - B1F1 SINE Alu -7 142 5 4 789 651 261 19 20 chr15 26817774 26817932 -76677042 + B3A SINE B2 3 166 -32 4 789 229 246 28 28 chr15 26818221 26818292 -76676682 + MLT1A1 LTR MaLR 8 78 -330 4 789 271 269 24 32 chr15 26819018 26819141 -76675833 - Lx9 LINE L1 -15 7629 7508 4 789 492 18 0 0 chr15 26819143 26819200 -76675774 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 789 332 325 126 83 chr15 26820105 26820407 -76674567 + MLT1A0 LTR MaLR 25 339 -26 4 789 195 42 0 0 chr15 26820812 26820836 -76674138 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 4 789 1071 123 0 18 chr15 26820838 26821004 -76673970 - B2_Mm2 SINE B2 -31 164 2 4 789 217 394 11 0 chr15 26821055 26821149 -76673825 + MIR SINE MIR 162 256 -6 4 789 250 59 0 0 chr15 26821805 26821839 -76673135 + U2 snRNA snRNA 1 34 -154 4 789 29 28 0 0 chr15 26826505 26826541 -76668433 + AT_rich Low_complexity Low_complexity 1 36 0 4 789 568 287 12 43 chr15 26826645 26826809 -76668165 - ID_B1 SINE B4 -64 160 2 4 789 2006 292 41 25 chr15 26827699 26828352 -76666622 + Lx8 LINE L1 6654 7317 -156 4 789 212 167 41 20 chr15 26828418 26828467 -76666507 + T-rich Low_complexity Low_complexity 1 50 0 4 789 500 245 156 57 chr15 26828896 26829096 -76665878 + B4A SINE B4 1 221 -71 4 789 400 214 636 0 chr15 26829096 26829228 -76665746 + B3A SINE B2 1 216 0 4 789 240 297 40 13 chr15 26829225 26829300 -76665674 + B4A SINE B4 216 292 0 4 789 188 241 0 53 chr15 26830199 26830313 -76664661 + (TATG)n Simple_repeat Simple_repeat 1 108 0 4 789 510 246 56 126 chr15 26830318 26830377 -76664597 - B3 SINE B2 -14 202 156 4 789 521 64 13 0 chr15 26830377 26830455 -76664519 + (TG)n Simple_repeat Simple_repeat 2 80 0 4 789 637 246 56 126 chr15 26830455 26830609 -76664365 - B3A SINE B2 -30 168 4 4 789 370 384 93 13 chr15 26831557 26831932 -76663042 - L2 LINE L2 -951 2468 2064 4 789 265 338 132 13 chr15 26832880 26833039 -76661935 - MER20 DNA MER1_type -1 218 41 4 789 285 331 81 81 chr15 26833621 26833782 -76661192 + LTR16A LTR ERVL 195 355 -96 4 789 261 362 105 40 chr15 26834149 26834595 -76660379 + L2 LINE L2 643 1117 -2302 4 789 883 203 10 0 chr15 26834611 26834803 -76660171 + Lx5 LINE L1 6534 6727 -323 4 789 2934 30 0 0 chr15 26834803 26835140 -76659834 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 789 7281 23 2 7 chr15 26835140 26836028 -76658946 - IAPEz-int LTR ERVK 0 6481 5598 4 789 26154 30 29 11 chr15 26836019 26839304 -76655670 - IAPEz-int LTR ERVK -3130 3351 8 4 789 3008 15 0 0 chr15 26839304 26839641 -76655333 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 789 1102 223 115 4 chr15 26839641 26839920 -76655054 + Lx5 LINE L1 6722 7031 -19 4 789 285 306 88 8 chr15 26840158 26840283 -76654691 + L2 LINE L2 1465 1599 -1820 4 789 484 122 0 0 chr15 26841053 26841127 -76653847 + ORR1B2 LTR MaLR 1 74 -320 4 789 589 188 119 45 chr15 26841106 26841240 -76653734 + ORR1B2 LTR MaLR 224 367 0 4 789 530 309 124 67 chr15 26841240 26841805 -76653169 + L2 LINE L2 2088 2684 -735 4 789 3305 43 5 0 chr15 26842101 26842495 -76652479 - MTA_Mm LTR MaLR 0 396 1 4 789 611 208 0 37 chr15 26843654 26843789 -76651185 + RSINE1 SINE B4 3 132 -33 4 789 886 289 21 7 chr15 26843789 26844068 -76650906 - Lx8 LINE L1 -864 6609 6327 4 789 227 316 0 42 chr15 26844217 26844336 -76650638 + CT-rich Low_complexity Low_complexity 3 116 0 4 789 310 265 207 25 chr15 26844387 26844632 -76650342 - Lx8 LINE L1 -211 5666 5365 4 789 261 240 0 0 chr15 26844739 26844789 -76650185 - RSINE1 SINE B4 -100 65 16 4 789 22 0 0 0 chr15 26845444 26845466 -76649508 + AT_rich Low_complexity Low_complexity 1 22 0 4 789 340 288 29 9 chr15 26845624 26845729 -76649245 + PB1D10 SINE Alu 11 117 0 4 789 28 48 0 0 chr15 26846859 26846901 -76648073 + AT_rich Low_complexity Low_complexity 1 42 0 4 789 901 267 55 16 chr15 26847355 26847610 -76647364 - Lx5 LINE L1 0 7050 6786 4 789 855 129 0 0 chr15 26847636 26847814 -76647160 + (TCC)n Simple_repeat Simple_repeat 1 178 0 4 789 1041 96 0 0 chr15 26847829 26848007 -76646967 + (TCC)n Simple_repeat Simple_repeat 3 180 0 4 789 666 169 0 0 chr15 26848015 26848105 -76646869 + polypyrimidine Low_complexity Low_complexity 91 180 0 4 789 1152 79 0 0 chr15 26848105 26848283 -76646691 + (TCC)n Simple_repeat Simple_repeat 3 180 0 4 789 666 169 0 0 chr15 26848283 26848370 -76646604 + polypyrimidine Low_complexity Low_complexity 4 90 0 4 789 842 128 0 11 chr15 26848372 26848554 -76646420 + (TCC)n Simple_repeat Simple_repeat 1 180 0 4 789 2714 210 2 4 chr15 26848556 26849092 -76645882 - Lx5 LINE L1 -255 6795 6261 4 789 313 100 0 0 chr15 26849157 26849207 -76645767 - L1_Mus2 LINE L1 0 6566 6517 4 789 261 27 27 0 chr15 26849207 26849244 -76645730 + L1_Mus1 LINE L1 6287 6324 -243 4 789 2653 62 0 0 chr15 26849626 26849965 -76645009 - L1Md_T LINE L1 0 6582 6244 4 789 1197 89 0 0 chr15 26849966 26850135 -76644839 + L1Md_F2 LINE L1 6047 6215 -367 4 789 345 167 0 0 chr15 26850570 26850648 -76644326 + GA-rich Low_complexity Low_complexity 2 79 0 4 789 5348 50 0 3 chr15 26852489 26853148 -76641826 + L1Md_F2 LINE L1 5924 6580 -2 4 789 21 36 0 0 chr15 26853352 26853380 -76641594 + AT_rich Low_complexity Low_complexity 1 28 0 4 789 190 143 41 0 chr15 26853678 26853727 -76641247 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 789 2556 290 66 63 chr15 26853830 26854995 -76639979 + Lx8 LINE L1 6207 7375 -98 5 789 787 344 40 48 chr15 26855122 26855473 -76639501 + ORR1E LTR MaLR 12 359 0 5 789 392 260 39 0 chr15 26855561 26855665 -76639309 - Tigger7 DNA MER2_type -1881 610 503 5 789 480 59 0 0 chr15 26855690 26855758 -76639216 + (CA)n Simple_repeat Simple_repeat 2 69 0 5 789 2703 153 163 39 chr15 26855835 26856449 -76638525 + RMER6C LTR ERVK 1 690 0 5 789 198 0 0 0 chr15 26857076 26857098 -76637876 + (A)n Simple_repeat Simple_repeat 1 22 0 5 789 191 382 46 0 chr15 26857227 26857358 -76637616 - MIRb SINE MIR -75 193 57 5 789 252 0 0 0 chr15 26857652 26857680 -76637294 + (T)n Simple_repeat Simple_repeat 1 28 0 5 789 447 78 0 0 chr15 26858671 26858735 -76636239 + (TA)n Simple_repeat Simple_repeat 1 64 0 5 789 360 0 0 0 chr15 26858801 26858841 -76636133 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 789 624 93 0 0 chr15 26858841 26858937 -76636037 + (TA)n Simple_repeat Simple_repeat 2 98 0 5 789 266 330 25 42 chr15 26859010 26859130 -76635844 - MLT2B2 LTR ERVL -179 336 219 5 789 495 0 0 0 chr15 26859152 26859207 -76635767 + (GA)n Simple_repeat Simple_repeat 1 55 0 5 789 251 289 0 73 chr15 26859300 26859382 -76635592 - MLT2B2 LTR ERVL -433 82 7 5 789 313 213 27 0 chr15 26859477 26859552 -76635422 + MLT2B2 LTR ERVL 18 94 -421 5 789 189 0 0 0 chr15 26860716 26860737 -76634237 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 5 789 872 313 23 8 chr15 26860833 26861094 -76633880 - MTEa LTR MaLR -5 374 110 5 789 483 267 39 68 chr15 26861687 26861892 -76633082 - RLTR14 LTR ERV1 -13 369 171 5 789 214 229 14 28 chr15 26862071 26862085 -76632889 + A-rich Low_complexity Low_complexity 2 15 0 5 789 1220 48 0 0 chr15 26862085 26862232 -76632742 + B1_Mm SINE Alu 1 147 0 5 789 214 229 14 28 chr15 26862232 26862289 -76632685 + A-rich Low_complexity Low_complexity 16 72 0 5 789 180 0 0 0 chr15 26863468 26863488 -76631486 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 789 397 253 12 15 chr15 26863811 26863929 -76631045 + B1F SINE Alu 13 125 -24 5 789 635 327 88 69 chr15 26864791 26865281 -76629693 - MLT1D LTR MaLR -3 502 4 5 789 478 370 111 31 chr15 26865434 26865822 -76629152 - MER74B LTR ERVL -128 494 76 5 789 378 282 155 0 chr15 26866774 26866955 -76628019 - Lx8 LINE L1 -2 7471 7263 5 789 272 229 48 0 chr15 26867542 26867625 -76627349 + L1_Rod LINE L1 1469 1555 -4292 5 789 266 227 13 0 chr15 26867622 26867697 -76627277 + L1_Mur3 LINE L1 4297 4372 -1508 5 789 504 206 0 0 chr15 26867698 26867837 -76627137 + (CA)n Simple_repeat Simple_repeat 1 139 0 5 789 412 257 28 57 chr15 26867877 26867898 -76627076 + L1_Mur3 LINE L1 4423 4441 -1439 5 789 4378 30 0 0 chr15 26867898 26868401 -76626573 + L1Md_T LINE L1 6078 6580 -2 5 789 412 257 28 57 chr15 26868401 26868556 -76626418 + L1_Mur3 LINE L1 4442 4594 -1286 5 789 743 229 36 58 chr15 26868557 26868780 -76626194 - ORR1D1 LTR MaLR -4 370 153 5 789 1791 188 39 6 chr15 26868786 26869123 -76625851 - MTC LTR MaLR 0 421 74 5 789 3057 38 8 8 chr15 26869123 26869498 -76625476 - L1Md_F2 LINE L1 -13 6569 6195 5 789 1565 246 34 44 chr15 26869498 26869543 -76625431 - MTC LTR MaLR -339 80 41 5 98 1938 42 0 0 chr15 26869543 26869782 -76625192 + L1Md_F2 LINE L1 5868 6106 -476 5 790 423 223 14 5 chr15 26869782 26869892 -76625082 - MTC LTR MaLR -309 110 1 5 790 704 203 19 45 chr15 26869895 26870050 -76624924 - ORR1D1 LTR MaLR -223 151 1 5 790 1920 187 22 0 chr15 26870051 26870414 -76624560 - ORR1D1-int LTR MaLR -1 1369 999 5 790 921 79 0 0 chr15 26870423 26870550 -76624424 + (TCTCCC)n Simple_repeat Simple_repeat 4 130 0 5 790 198 171 0 0 chr15 26870550 26870591 -76624383 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 790 235 149 21 0 chr15 26870592 26870639 -76624335 + CT-rich Low_complexity Low_complexity 2 49 0 5 790 267 253 76 35 chr15 26870914 26871086 -76623888 - L1M5 LINE L1 -958 5486 5308 5 790 750 131 0 0 chr15 26871093 26871215 -76623759 + (TA)n Simple_repeat Simple_repeat 2 123 0 5 790 325 337 33 80 chr15 26871304 26871517 -76623457 - L1M5 LINE L1 -1014 5132 4930 5 790 268 295 86 7 chr15 26871595 26871735 -76623239 - L1M5 LINE L1 -1316 4830 4680 5 790 266 0 29 0 chr15 26872657 26872691 -76622283 + (TTG)n Simple_repeat Simple_repeat 2 36 0 5 790 235 125 0 0 chr15 26872773 26872813 -76622161 + Lx9 LINE L1 6913 6952 -692 5 790 375 23 0 0 chr15 26872815 26872859 -76622115 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 790 1734 223 102 14 chr15 26872881 26873391 -76621583 + Lx9 LINE L1 6897 7451 -193 5 790 312 278 66 16 chr15 26873823 26874140 -76620834 - L1M5 LINE L1 -3263 2883 2530 5 790 414 210 9 64 chr15 26874685 26874998 -76619976 + L1_Rod LINE L1 3541 3898 -1949 5 790 243 0 0 0 chr15 26875088 26875115 -76619859 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 790 498 324 98 51 chr15 26875161 26875415 -76619559 - B4 SINE B4 -22 270 5 5 790 239 283 273 13 chr15 26875782 26875936 -76619038 + B3A SINE B2 1 194 -4 5 790 27 73 0 0 chr15 26876242 26876297 -76618677 + AT_rich Low_complexity Low_complexity 1 55 0 5 790 227 350 0 0 chr15 26876881 26876984 -76617990 + L1MD1 LINE L1 17 119 -6514 5 790 246 278 61 122 chr15 26877310 26877474 -76617500 + L1MD1 LINE L1 700 853 -5780 5 790 294 299 28 0 chr15 26877644 26877751 -76617223 + L1MD1 LINE L1 967 1076 -5557 5 790 321 323 94 6 chr15 26877910 26878069 -76616905 + L1MD1 LINE L1 1300 1472 -5161 5 790 198 0 0 0 chr15 26878211 26878233 -76616741 + (AGTAG)n Simple_repeat Simple_repeat 5 26 0 5 790 393 332 129 0 chr15 26878664 26878866 -76616108 + L1MD1 LINE L1 1743 1970 -4663 5 790 708 74 0 0 chr15 26878868 26878963 -76616011 + (GGA)n Simple_repeat Simple_repeat 3 97 0 5 790 417 286 79 23 chr15 26879074 26879378 -76615596 + L1MD1 LINE L1 4732 5052 -1485 5 790 254 75 56 56 chr15 26879390 26879461 -76615513 + (TCTCTG)n Simple_repeat Simple_repeat 2 72 0 5 790 234 279 15 0 chr15 26879623 26879691 -76615283 + L1MD1 LINE L1 5185 5253 -1284 5 790 2467 97 38 16 chr15 26879770 26880137 -76614837 - L1Md_F2 LINE L1 -3 6579 6205 5 790 286 315 39 31 chr15 26880137 26880366 -76614608 + L1MD1 LINE L1 5292 5522 -1015 5 790 313 310 87 6 chr15 26880479 26880651 -76614323 + L1MD1 LINE L1 5680 5865 -885 5 790 333 0 0 0 chr15 26880761 26880798 -76614176 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 790 23 0 0 0 chr15 26880990 26881013 -76613961 + AT_rich Low_complexity Low_complexity 1 23 0 5 790 2598 185 51 2 chr15 26881068 26881540 -76613434 + RMER5 LTR ERV1 13 507 -27 5 790 222 37 0 0 chr15 26881575 26881602 -76613372 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 5 790 555 324 19 14 chr15 26881624 26881840 -76613134 + L1MD1 LINE L1 5967 6183 -450 5 790 1014 285 41 74 chr15 26881932 26882299 -76612675 - ORR1E LTR MaLR -4 355 1 5 790 328 276 153 15 chr15 26882304 26882506 -76612468 + L1MD1 LINE L1 6309 6538 -95 5 790 612 315 34 133 chr15 26882506 26882920 -76612054 + MLT1A LTR MaLR 2 374 0 5 790 303 28 0 0 chr15 26883094 26883130 -76611844 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 790 184 100 50 0 chr15 26883151 26883191 -76611783 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 790 708 196 0 0 chr15 26883207 26883386 -76611588 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 790 261 0 0 0 chr15 26885234 26885263 -76609711 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 790 732 224 10 19 chr15 26885672 26885881 -76609093 - L1MA4 LINE L1 -388 5912 5706 5 790 2051 226 17 149 chr15 26887153 26887856 -76607118 + RMER19C LTR ERVK 2 611 0 5 790 2626 128 19 0 chr15 26887914 26888329 -76606645 - Lx2A LINE L1 -6 7002 6580 5 790 23 54 0 0 chr15 26888397 26888434 -76606540 + AT_rich Low_complexity Low_complexity 1 37 0 5 790 343 261 35 18 chr15 26889138 26889251 -76605723 + L1MB7 LINE L1 6055 6169 -15 5 790 782 238 42 9 chr15 26889265 26889481 -76605493 - MER121 Unknown Unknown -168 244 22 5 790 1437 129 4 39 chr15 26891705 26891721 -76603253 + URR1A DNA MER1_type 1 11 -215 5 790 2616 112 62 15 chr15 26891721 26891835 -76603139 - Lx LINE L1 -1 6653 6535 5 790 180 0 0 0 chr15 26891835 26891855 -76603119 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 5 790 2616 112 62 15 chr15 26891855 26892146 -76602828 - Lx LINE L1 -120 6534 6231 5 790 1437 129 4 39 chr15 26892146 26892363 -76602611 + URR1A DNA MER1_type 12 226 0 5 790 279 295 21 93 chr15 26893645 26893742 -76601232 + B3A SINE B2 89 178 -38 5 790 360 357 41 59 chr15 26893810 26894081 -76600893 + ORR1E LTR MaLR 87 352 -7 5 790 539 165 47 0 chr15 26894365 26894492 -76600482 - Lx9 LINE L1 -1 7643 7511 5 790 223 93 47 0 chr15 26894654 26894697 -76600277 + (TC)n Simple_repeat Simple_repeat 1 45 0 5 790 459 0 0 0 chr15 26894792 26894843 -76600131 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 790 451 226 228 24 chr15 26894843 26894970 -76600004 - Lx9 LINE L1 -191 7453 7301 5 790 411 343 33 105 chr15 26895335 26895641 -76599333 - B4A SINE B4 -6 286 3 5 790 226 167 73 18 chr15 26895809 26895864 -76599110 + L1MA6 LINE L1 6164 6221 -79 5 790 967 215 19 51 chr15 26895870 26896086 -76598888 - ORR1D1 LTR MaLR 0 374 166 5 790 500 0 17 0 chr15 26896086 26896146 -76598828 + (GA)n Simple_repeat Simple_repeat 1 61 0 5 790 789 241 68 35 chr15 26896167 26896409 -76598565 - ORR1D1 LTR MaLR -109 261 1 5 790 252 267 13 0 chr15 26896409 26896484 -76598490 + L1MA6 LINE L1 6223 6298 -2 5 790 192 77 0 0 chr15 26897854 26897880 -76597094 + (A)n Simple_repeat Simple_repeat 1 26 0 5 790 325 292 10 73 chr15 26898044 26898140 -76596834 + MLT1A LTR MaLR 1 90 -284 5 790 21 0 0 0 chr15 26898827 26898848 -76596126 + AT_rich Low_complexity Low_complexity 1 21 0 5 790 207 0 0 0 chr15 26898906 26898929 -76596045 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 5 790 1282 75 0 11 chr15 26900283 26900458 -76594516 + L1Md_F2 LINE L1 6408 6580 -2 5 790 34 0 0 0 chr15 26900458 26900492 -76594482 + AT_rich Low_complexity Low_complexity 1 34 0 5 790 225 291 0 0 chr15 26900507 26900562 -76594412 + (CATATA)n Simple_repeat Simple_repeat 4 58 0 5 790 488 256 40 8 chr15 26900836 26900962 -76594012 + Lx9 LINE L1 7081 7210 -434 5 790 233 119 0 23 chr15 26901000 26901043 -76593931 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 790 309 205 86 43 chr15 26901067 26901184 -76593790 + Lx9 LINE L1 7370 7491 -153 5 790 231 176 0 38 chr15 26901198 26901251 -76593723 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 790 180 111 0 0 chr15 26901366 26901393 -76593581 + (T)n Simple_repeat Simple_repeat 1 27 0 5 790 970 159 0 0 chr15 26901405 26901543 -76593431 + B1_Mur3 SINE Alu 1 138 -11 5 790 1229 122 36 40 chr15 26901734 26901956 -76593018 - Lx2B LINE L1 -4 6996 6776 5 790 414 0 0 0 chr15 26902137 26902183 -76592791 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 790 647 326 29 109 chr15 26903756 26903853 -76591121 - B4A SINE B4 0 292 203 5 790 3169 23 9 0 chr15 26903853 26904196 -76590778 + ORR1A0 LTR MaLR 1 346 0 5 790 647 326 29 109 chr15 26904196 26904260 -76590714 - B4A SINE B4 -90 202 150 5 790 438 108 0 0 chr15 26904260 26904334 -76590640 + (TG)n Simple_repeat Simple_repeat 2 75 0 5 790 647 326 29 109 chr15 26904334 26904484 -76590490 - B4A SINE B4 -143 149 5 5 790 189 0 0 0 chr15 26904569 26904590 -76590384 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 5 790 1574 192 39 3 chr15 26904625 26904933 -76590041 + RMER1C Other Other 1020 1338 -4 6 790 195 42 0 0 chr15 26905268 26905292 -76589682 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 790 519 171 0 0 chr15 26905566 26905671 -76589303 + CT-rich Low_complexity Low_complexity 3 107 0 6 790 519 186 0 0 chr15 26905981 26906083 -76588891 + (CA)n Simple_repeat Simple_repeat 1 102 0 6 790 2334 87 58 0 chr15 26906379 26906688 -76588286 + ORR1A2 LTR MaLR 1 327 0 6 790 440 366 6 11 chr15 26906786 26906960 -76588014 + GA-rich Low_complexity Low_complexity 2 174 0 6 790 348 341 21 43 chr15 26907036 26907177 -76587797 + MT2A LTR ERVL 70 207 -326 6 790 723 312 87 48 chr15 26907335 26908113 -76586861 + L1ME1 LINE L1 5260 6068 -111 6 790 502 283 31 36 chr15 26908509 26908670 -76586304 + ID_B1 SINE B4 68 224 0 6 790 264 347 92 53 chr15 26908720 26908872 -76586102 + RSINE1 SINE B4 8 165 0 6 790 207 235 0 19 chr15 26909790 26909842 -76585132 + T-rich Low_complexity Low_complexity 3 53 0 6 790 531 0 0 0 chr15 26909949 26910008 -76584966 + (GA)n Simple_repeat Simple_repeat 2 60 0 6 790 1075 247 103 47 chr15 26910532 26910872 -76584102 + ORR1E LTR MaLR 1 359 0 6 790 590 282 30 20 chr15 26910977 26911162 -76583812 - B3A SINE B2 -10 185 1 6 790 250 276 126 26 chr15 26911886 26912076 -76582898 + L1M4 LINE L1 3813 4021 -2125 6 790 450 0 0 0 chr15 26912125 26912175 -76582799 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 790 496 93 0 26 chr15 26912561 26912654 -76582320 - B1_Mus1 SINE Alu -35 85 1 6 790 433 284 0 0 chr15 26912732 26912820 -76582154 + ID_B1 SINE B4 80 167 -57 6 790 1257 145 91 10 chr15 26913212 26913421 -76581553 - URR1A DNA MER1_type 0 226 1 6 790 852 29 0 0 chr15 26914495 26914598 -76580376 + (CA)n Simple_repeat Simple_repeat 2 104 0 6 790 227 270 78 11 chr15 26914626 26914716 -76580258 + MER58C DNA MER1_type 31 126 -89 6 790 270 73 0 0 chr15 26915883 26915924 -76579050 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 6 790 266 0 29 0 chr15 26917039 26917073 -76577901 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 790 1222 62 7 0 chr15 26917073 26917212 -76577762 - B1_Mus1 SINE Alu -6 142 3 6 790 1777 335 53 33 chr15 26917224 26918126 -76576848 + Lx8 LINE L1 6189 7108 -365 6 790 352 223 29 10 chr15 26918133 26918237 -76576737 + Lx9 LINE L1 7412 7517 -127 6 790 504 191 236 0 chr15 26918281 26918459 -76576515 + Lx9 LINE L1 7419 7638 -6 6 790 630 39 0 0 chr15 26918488 26918565 -76576409 + (GGGA)n Simple_repeat Simple_repeat 4 80 0 6 790 687 291 80 15 chr15 26918661 26918985 -76575989 - Charlie1 DNA MER1_type -1747 1034 690 6 790 1215 262 71 22 chr15 26919287 26919741 -76575233 + L1MA7 LINE L1 5807 6291 0 6 790 2742 100 26 3 chr15 26919814 26920204 -76574770 - MTB_Mm LTR MaLR -8 399 1 6 790 288 0 0 0 chr15 26920259 26920291 -76574683 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6 790 197 289 77 26 chr15 26922045 26922123 -76572851 - MIR3 SINE MIR -6 202 121 6 790 901 281 14 14 chr15 26922131 26922351 -76572623 + ID_B1 SINE B4 5 224 0 6 790 2325 120 15 0 chr15 26922375 26922708 -76572266 + Lx2 LINE L1 6660 6997 0 6 790 546 98 0 0 chr15 26922752 26922834 -76572140 + (TG)n Simple_repeat Simple_repeat 1 82 0 6 790 435 290 76 0 chr15 26923281 26923412 -76571562 + Tigger5 DNA MER2_type 2265 2405 -1 6 790 459 0 0 0 chr15 26924244 26924295 -76570679 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 790 31984 125 16 19 chr15 26924457 26928123 -76566851 + L1_Mus1 LINE L1 203 3856 -2027 6 790 2080 127 57 89 chr15 26928123 26928529 -76566445 + RLTR9C LTR ERVK 1 393 0 6 790 31984 88 4 2 chr15 26928529 26931230 -76563744 + L1_Mus1 LINE L1 3857 6565 -2 6 790 483 48 0 0 chr15 26932305 26932367 -76562607 + (TG)n Simple_repeat Simple_repeat 2 63 0 6 790 546 16 0 0 chr15 26933664 26933727 -76561247 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 6 790 297 284 30 45 chr15 26933741 26933874 -76561100 - L1MA9 LINE L1 0 6312 6182 6 790 267 387 90 55 chr15 26934007 26934152 -76560822 - B4A SINE B4 0 292 143 6 790 4155 216 28 55 chr15 26934383 26935411 -76559563 + ORR1C1-int LTR MaLR 370 1370 0 6 790 1974 204 8 31 chr15 26935413 26935798 -76559176 + ORR1C1 LTR MaLR 3 378 0 6 790 2914 301 53 20 chr15 26935807 26936896 -76558078 + Lx7 LINE L1 6327 7471 -2 6 790 21 0 0 0 chr15 26936896 26936917 -76558057 + AT_rich Low_complexity Low_complexity 1 21 0 6 790 384 119 0 0 chr15 26936917 26936976 -76557998 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 790 270 210 16 27 chr15 26937885 26938074 -76556900 + CT-rich Low_complexity Low_complexity 1 186 0 6 790 352 285 80 74 chr15 26938167 26938330 -76556644 - Tigger5 DNA MER2_type -2241 165 2 6 790 3600 92 10 14 chr15 26939213 26939701 -76555273 + Lx LINE L1 6169 6654 0 6 790 848 258 85 5 chr15 26939871 26940070 -76554904 - B3 SINE B2 -1 215 1 6 790 223 140 0 39 chr15 26940544 26940596 -76554378 + T-rich Low_complexity Low_complexity 1 50 0 6 790 1840 93 4 8 chr15 26940702 26940951 -76554023 + L1Md_F2 LINE L1 6323 6570 -12 6 790 192 83 0 59 chr15 26940976 26941027 -76553947 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 6 790 4375 257 57 25 chr15 26941050 26942337 -76552637 - Lx7 LINE L1 -376 7320 5993 6 790 200 35 35 0 chr15 26943893 26943922 -76551052 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 6 790 253 217 0 0 chr15 26945127 26945187 -76549787 - MLT1A1 LTR MaLR -12 396 337 6 790 1754 189 39 90 chr15 26945404 26945484 -76549490 + MTC LTR MaLR 1 72 -349 6 790 1031 106 0 0 chr15 26945484 26945626 -76549348 + B1_Mus1 SINE Alu 1 142 -6 6 790 513 47 0 0 chr15 26945627 26945691 -76549283 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 790 1754 189 39 90 chr15 26945691 26946043 -76548931 + MTC LTR MaLR 73 413 -8 6 790 229 224 85 96 chr15 26946047 26946141 -76548833 - MLT1A1 LTR MaLR -272 93 1 6 790 844 130 177 5 chr15 26946542 26946728 -76548246 - Lx2 LINE L1 -3 6994 6777 6 790 1579 101 0 16 chr15 26946716 26946958 -76548016 + Lx2 LINE L1 6555 6792 -205 6 790 4138 136 31 11 chr15 26947011 26947659 -76547315 - Lx2B LINE L1 0 7000 6340 6 790 183 220 38 8 chr15 26948366 26948499 -76546475 + (TA)n Simple_repeat Simple_repeat 1 137 0 6 790 2183 180 26 31 chr15 26948624 26948750 -76546224 + MTC LTR MaLR 5 130 -291 6 790 3437 28 0 0 chr15 26948750 26949146 -76545828 + MTA_Mm LTR MaLR 1 396 0 6 790 2183 180 26 31 chr15 26949146 26949438 -76545536 + MTC LTR MaLR 131 421 0 6 790 614 296 23 17 chr15 26951414 26951589 -76543385 - MTE2b LTR MaLR -11 368 193 6 790 2977 107 101 0 chr15 26951628 26952095 -76542879 - Lx3C LINE L1 -14 6962 6449 6 790 690 262 30 6 chr15 26952118 26952287 -76542687 - MTE2b LTR MaLR -206 173 1 6 790 873 179 3 14 chr15 26952586 26952865 -76542109 + CT-rich Low_complexity Low_complexity 1 276 0 6 790 389 333 27 20 chr15 26952882 26953032 -76541942 + MLT1A0 LTR MaLR 215 365 0 6 790 250 225 14 27 chr15 26953231 26953304 -76541670 + L1M4 LINE L1 4844 4915 -1231 6 790 646 256 176 9 chr15 26953307 26953721 -76541253 + L1MA8 LINE L1 5187 5673 -618 6 790 285 311 134 49 chr15 26953900 26954147 -76540827 + Lx8 LINE L1 6952 7219 -254 6 790 315 0 0 0 chr15 26954148 26954183 -76540791 + (A)n Simple_repeat Simple_repeat 1 35 0 6 790 784 273 135 26 chr15 26954394 26954936 -76540038 + L1MA8 LINE L1 5657 6257 -34 6 790 210 71 0 0 chr15 26956014 26956042 -76538932 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 6 790 240 163 0 0 chr15 26956534 26956577 -76538397 + CT-rich Low_complexity Low_complexity 3 45 0 6 790 352 319 3 12 chr15 26956603 26956763 -76538211 - Lx7 LINE L1 -388 7308 7165 6 790 180 0 0 0 chr15 26956772 26956792 -76538182 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 6 790 385 272 76 25 chr15 26957975 26958104 -76536870 + B3A SINE B2 30 161 -32 6 790 602 37 12 0 chr15 26958121 26958202 -76536772 + (TAGA)n Simple_repeat Simple_repeat 3 84 0 6 790 247 221 15 0 chr15 26958203 26958271 -76536703 + (TA)n Simple_repeat Simple_repeat 1 69 0 6 790 21 0 0 0 chr15 26958300 26958321 -76536653 + AT_rich Low_complexity Low_complexity 1 21 0 6 790 264 321 25 0 chr15 26958418 26958499 -76536475 - L2a LINE L2 -43 3383 3301 6 790 513 0 0 0 chr15 26959834 26959891 -76535083 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 790 423 298 190 17 chr15 26960119 26960351 -76534623 + MLT-int LTR MaLR 1462 1733 -2 6 790 7883 48 2 1 chr15 26960427 26962123 -76532851 - L1Md_F3 LINE L1 0 6584 4888 6 790 251 322 75 29 chr15 26962333 26962573 -76532401 - HERVL40-int LTR ERVL -1714 4043 3793 6 790 299 374 18 37 chr15 26962630 26962794 -76532180 + LTR40a LTR ERVL 1 161 -358 6 790 787 345 59 28 chr15 26962846 26963386 -76531588 - HERVL40-int LTR ERVL -2612 2918 2362 6 790 1056 52 0 0 chr15 26963466 26963601 -76531373 + (GAAAA)n Simple_repeat Simple_repeat 2 136 0 6 790 741 254 42 5 chr15 26963944 26964158 -76530816 + Lx7 LINE L1 7025 7246 -450 6 790 895 326 43 41 chr15 26964850 26965218 -76529756 - LTR40a LTR ERVL -2 517 149 6 790 21 0 0 0 chr15 26965465 26965486 -76529488 + AT_rich Low_complexity Low_complexity 1 21 0 6 790 34728 60 4 1 chr15 26965720 26971683 -76523291 - L1Md_F3 LINE L1 -16 6568 631 6 790 375 325 54 54 chr15 26972074 26972279 -76522695 + B4A SINE B4 3 207 -85 6 790 1478 273 105 35 chr15 26972170 26972807 -76522167 + MTD-int LTR MaLR 658 1578 -2 6 790 879 315 79 14 chr15 26972834 26973188 -76521786 + MTD LTR MaLR 26 402 -17 6 790 5695 33 0 0 chr15 26974484 26975155 -76519819 + L1Md_T LINE L1 5912 6582 0 6 790 2448 159 23 5 chr15 26975498 26975935 -76519039 + Lx2B LINE L1 6408 6852 -148 6 790 11493 89 29 34 chr15 26975934 26978763 -76516211 + Lx3_Mus LINE L1 4184 7008 -1 6 790 696 93 18 45 chr15 26978764 26978876 -76516098 + PB1D9 SINE Alu 1 109 -11 6 790 371 258 26 7 chr15 26979209 26979361 -76515613 + Lx9 LINE L1 7489 7643 -1 6 790 369 102 0 0 chr15 26979476 26979535 -76515439 + (CTTG)n Simple_repeat Simple_repeat 1 59 0 7 790 417 116 0 0 chr15 26980704 26980773 -76514201 + (CA)n Simple_repeat Simple_repeat 2 70 0 7 790 237 250 0 0 chr15 26981326 26981378 -76513596 + (CATA)n Simple_repeat Simple_repeat 3 54 0 7 790 406 287 42 19 chr15 26981637 26981850 -76513124 + L1M4b LINE L1 2 219 -7115 7 790 721 341 40 12 chr15 26981908 26982157 -76512817 - B4A SINE B4 -8 284 29 7 790 13298 20 0 0 chr15 26982794 26984410 -76510564 + L1Md_T LINE L1 3971 5586 -297 7 790 8935 5 0 0 chr15 26984410 26985394 -76509580 + L1Md_T LINE L1 5587 6570 -12 7 790 447 19 0 0 chr15 26985763 26985815 -76509159 + (TC)n Simple_repeat Simple_repeat 2 53 0 7 790 300 321 79 16 chr15 26987349 26987539 -76507435 + L1M4b LINE L1 5247 5448 -1558 7 790 261 298 151 49 chr15 26987552 26987874 -76507100 + L1M4b LINE L1 5486 5873 -1133 7 790 3517 25 2 154 chr15 26987874 26988434 -76506540 - IAPLTR2_Mm LTR ERVK 0 475 1 7 790 261 298 151 49 chr15 26988434 26988641 -76506333 + L1M4b LINE L1 5874 6069 -937 7 790 306 0 0 0 chr15 26988695 26988729 -76506245 + (TCTA)n Simple_repeat Simple_repeat 3 36 0 7 790 742 161 269 6 chr15 26989500 26989656 -76505318 - MTC LTR MaLR 0 421 225 7 790 2456 161 14 5 chr15 26989656 26990073 -76504901 - MTC LTR MaLR 0 421 1 7 790 3578 186 112 45 chr15 26990073 26990879 -76504095 - MTC-int LTR MaLR 0 1258 399 7 790 276 100 0 0 chr15 26990881 26990921 -76504053 + (ATG)n Simple_repeat Simple_repeat 1 40 0 7 790 1934 224 45 8 chr15 26990927 26991395 -76503579 - RMER1B Other Other -1 1065 581 7 790 1898 220 0 45 chr15 26991601 26992025 -76502949 - MTC-int LTR MaLR -853 405 1 7 790 1824 203 68 2 chr15 26992025 26992420 -76502554 - MTC LTR MaLR 0 421 1 7 790 520 304 72 81 chr15 26992675 26993022 -76501952 + MER2 DNA MER2_type 1 344 -1 7 790 427 334 157 9 chr15 26993719 26994092 -76500882 - LTR33B LTR ERVL -8 495 35 7 790 486 126 62 18 chr15 26995316 26995429 -76499545 - Lx9 LINE L1 -22 7622 7505 7 790 1364 173 54 0 chr15 26995453 26995713 -76499261 + Lx9 LINE L1 6585 6858 -786 7 790 2367 286 100 4 chr15 26995950 26996659 -76498315 + MTE-int LTR MaLR 770 1546 -34 7 790 586 340 64 56 chr15 26996647 26996989 -76497985 + ORR1E LTR MaLR 8 352 -7 7 790 2184 300 96 9 chr15 26997877 26998869 -76496105 - Lx8 LINE L1 -198 7275 6198 7 790 2188 83 133 20 chr15 26998874 26999219 -76495755 + Lx LINE L1 6268 6651 -3 7 790 569 226 121 35 chr15 26999567 26999741 -76495233 + MLT1A LTR MaLR 175 363 -11 7 790 375 44 0 0 chr15 26999928 26999973 -76495001 - ORR1A1 LTR MaLR -8 338 294 7 790 243 0 0 0 chr15 26999973 27000000 -76494974 + (TA)n Simple_repeat Simple_repeat 1 27 0 7 790 180 0 0 0 chr15 27000000 27000020 -76494954 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 790 2163 47 0 0 chr15 27000029 27000306 -76494668 - ORR1A1 LTR MaLR -69 277 1 2 791 188 61 0 57 chr15 27000877 27000912 -76494062 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 3 791 208 238 0 0 chr15 27003534 27003576 -76491398 + L2a LINE L2 3374 3415 -11 4 791 647 277 82 0 chr15 27003713 27003908 -76491066 + ID_B1 SINE B4 5 215 -9 5 791 342 285 70 23 chr15 27004693 27004862 -76490112 - MLT1C LTR MaLR -2 465 212 6 791 251 284 112 52 chr15 27004948 27005082 -76489892 - MLT1C LTR MaLR -485 142 1 6 791 336 24 0 0 chr15 27005448 27005489 -76489485 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 791 300 53 0 0 chr15 27006474 27006512 -76488462 + (TA)n Simple_repeat Simple_repeat 1 38 0 8 791 881 325 45 10 chr15 27007251 27007540 -76487434 + MTE2b LTR MaLR 1 299 -80 9 791 486 314 83 5 chr15 27007759 27007964 -76487010 - MLT1A0 LTR MaLR 0 365 145 1 791 399 240 58 41 chr15 27008206 27008355 -76486619 - Lx7 LINE L1 -501 5799 5641 1 791 2161 86 12 60 chr15 27008362 27008697 -76486277 + ORR1A2 LTR MaLR 1 319 -8 1 791 307 254 42 42 chr15 27008711 27008830 -76486144 - Lx7 LINE L1 -630 5661 5543 1 791 1533 54 69 0 chr15 27009687 27009890 -76485084 - L1_Mus2 LINE L1 -6 6560 6344 1 791 2616 65 0 14 chr15 27009892 27010249 -76484725 + L1_Mm LINE L1 5345 5696 -187 1 791 573 270 105 30 chr15 27010483 27010674 -76484300 - B3A SINE B2 -1 215 6 1 791 327 85 0 0 chr15 27012044 27012091 -76482883 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 791 207 250 19 0 chr15 27013136 27013188 -76481786 + GA-rich Low_complexity Low_complexity 4 56 0 1 791 641 273 0 7 chr15 27013477 27013621 -76481353 - MTEa-int LTR MaLR -1236 344 202 1 791 296 210 16 16 chr15 27013646 27013709 -76481265 - MTEa-int LTR MaLR -1517 63 1 1 791 323 318 88 130 chr15 27013712 27014060 -76480914 - MTEa LTR MaLR -3 376 2 1 791 331 338 114 33 chr15 27014204 27014415 -76480559 - MLT1G1 LTR MaLR -280 299 72 1 791 345 205 53 76 chr15 27014755 27014887 -76480087 - L1MA5 LINE L1 -49 6251 6123 2 791 2460 284 116 27 chr15 27015236 27016138 -76478836 - Lx8 LINE L1 -158 7315 6319 2 791 3862 49 19 0 chr15 27016138 27016604 -76478370 - MT2C_Mm LTR ERVL 0 475 1 2 791 2460 284 116 27 chr15 27016604 27016828 -76478146 - Lx8 LINE L1 -1155 6318 6088 2 791 426 296 55 27 chr15 27016866 27017012 -76477962 + MLT1A0 LTR MaLR 209 358 -7 2 791 445 314 22 104 chr15 27017130 27017361 -76477613 + ID_B1 SINE B4 4 215 -9 2 791 695 256 115 21 chr15 27018000 27018279 -76476695 + RMER20B LTR ERVK 108 412 -215 2 791 547 358 3 34 chr15 27018587 27018885 -76476089 - B4A SINE B4 -2 290 2 2 791 278 348 170 0 chr15 27021448 27021483 -76473491 - RSINE1 SINE B4 0 165 3 2 791 422 207 24 19 chr15 27021483 27021587 -76473387 - B3 SINE B2 -99 99 2 2 791 325 203 40 26 chr15 27021587 27021663 -76473311 - B4 SINE B4 -215 77 1 2 791 965 212 57 0 chr15 27021959 27022152 -76472822 + B3 SINE B2 4 207 -9 3 791 244 258 30 0 chr15 27023116 27023182 -76471792 - Charlie14a DNA MER1_type -1092 72 5 3 791 387 287 83 30 chr15 27023384 27023553 -76471421 + B3 SINE B2 15 192 -3 3 791 465 34 0 0 chr15 27024281 27024340 -76470634 + (TC)n Simple_repeat Simple_repeat 1 59 0 3 791 452 361 39 0 chr15 27024645 27024800 -76470174 - RSINE1 SINE B4 -2 163 3 3 791 415 312 14 100 chr15 27024939 27025149 -76469825 + MER102c DNA MER1_type 1 192 -139 3 791 214 348 100 17 chr15 27025524 27025764 -76469210 + L2 LINE L2 1856 2115 -1304 3 791 2018 221 48 8 chr15 27027198 27027723 -76467251 - Lx9 LINE L1 -2 7642 7097 3 791 451 196 372 0 chr15 27027728 27027918 -76467056 + Lx9 LINE L1 6809 7069 -575 3 791 5383 98 16 5 chr15 27028887 27030429 -76464545 + L1VL4 LINE L1 194 1753 -1806 3 791 6862 106 16 10 chr15 27030430 27031724 -76463250 + Lx2 LINE L1 5339 6643 -354 3 791 1378 148 0 0 chr15 27031724 27031941 -76463033 + Lx2 LINE L1 6775 6991 -6 3 791 491 266 91 30 chr15 27032065 27032197 -76462777 - B1_Mur1 SINE Alu 0 149 10 4 791 472 300 122 79 chr15 27032213 27032522 -76462452 - MTD LTR MaLR -29 378 41 4 791 933 152 166 10 chr15 27032522 27032715 -76462259 + URR1B DNA MER1_type 3 225 0 4 791 348 296 128 94 chr15 27032715 27032757 -76462217 - MTD LTR MaLR -381 40 1 4 791 23 0 0 0 chr15 27032994 27033017 -76461957 + AT_rich Low_complexity Low_complexity 1 23 0 4 791 1226 48 0 0 chr15 27033025 27033171 -76461803 - B1_Mus1 SINE Alu -1 147 2 4 791 380 331 73 0 chr15 27033548 27033672 -76461302 + RSINE1 SINE B4 3 135 -30 4 791 405 312 84 47 chr15 27033682 27033923 -76461051 - RMER12 LTR ERVK -3 1319 1102 4 791 4069 168 28 20 chr15 27034095 27034893 -76460081 - RLTR22_Mur LTR ERVK -1043 805 2 4 791 390 185 0 0 chr15 27034898 27034979 -76459995 + (CA)n Simple_repeat Simple_repeat 2 82 0 4 791 321 355 110 36 chr15 27035020 27035458 -76459516 + L1M5 LINE L1 2534 3003 -3143 4 791 507 33 0 0 chr15 27035878 27035939 -76459035 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 791 615 99 0 0 chr15 27035939 27036040 -76458934 + (GA)n Simple_repeat Simple_repeat 1 101 0 5 791 1115 232 44 42 chr15 27036137 27036434 -76458540 - MTD LTR MaLR -1 378 123 5 791 279 333 0 0 chr15 27036908 27036920 -76458054 + ID SINE ID 70 81 -143 5 791 425 296 2 0 chr15 27036920 27037017 -76457957 + B1F1 SINE Alu 1 99 -21 5 791 216 372 35 5 chr15 27037042 27037239 -76457735 - L2a LINE L2 -142 3284 3082 5 791 238 277 0 30 chr15 27038106 27038173 -76456801 + Lx8 LINE L1 6646 6710 -763 5 791 300 238 0 0 chr15 27039650 27039734 -76455240 + (CACCAT)n Simple_repeat Simple_repeat 6 89 0 5 791 453 324 65 38 chr15 27040685 27040871 -76454103 - MER20 DNA MER1_type -22 197 7 5 791 918 207 368 23 chr15 27041060 27041411 -76453563 - RMER15 LTR ERVL -75 500 29 5 791 228 163 0 0 chr15 27041414 27041457 -76453517 + (TTG)n Simple_repeat Simple_repeat 2 44 0 6 791 258 294 206 12 chr15 27041831 27041996 -76452978 - B3A SINE B2 0 198 2 6 791 1074 294 29 80 chr15 27042658 27042964 -76452010 - MTE2b LTR MaLR -12 367 81 6 791 648 234 175 48 chr15 27042964 27043215 -76451759 + RLTR20D LTR ERVK 1 283 -285 6 791 555 232 158 27 chr15 27043201 27043255 -76451719 + RLTR20D LTR ERVK 404 453 -115 6 791 465 34 0 0 chr15 27043255 27043314 -76451660 + (TG)n Simple_repeat Simple_repeat 1 59 0 6 791 197 65 32 0 chr15 27043316 27043347 -76451627 + (TTG)n Simple_repeat Simple_repeat 2 33 0 6 791 555 232 158 27 chr15 27043347 27043435 -76451539 + RLTR20D LTR ERVK 454 564 -4 6 791 305 207 146 0 chr15 27043438 27043520 -76451454 - MTE2a LTR MaLR -282 97 4 6 791 26 82 0 0 chr15 27043637 27043698 -76451276 + AT_rich Low_complexity Low_complexity 1 61 0 6 791 453 115 0 0 chr15 27044979 27045066 -76449908 + (A)n Simple_repeat Simple_repeat 1 87 0 6 791 978 122 42 11 chr15 27045160 27045350 -76449624 + Lx3_Mus LINE L1 6813 7008 -1 6 791 305 271 103 43 chr15 27045723 27046024 -76448950 + L1M2 LINE L1 2339 2657 -4192 7 791 6325 139 22 1 chr15 27046067 27047148 -76447826 + L1_Mm LINE L1 4693 5796 -87 7 791 2586 69 6 14 chr15 27047148 27047514 -76447460 + L1_Mus2 LINE L1 6204 6566 0 7 791 5358 125 21 3 chr15 27047528 27048376 -76446598 + Lx LINE L1 5783 6645 -9 7 791 375 23 0 0 chr15 27048376 27048420 -76446554 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 791 180 0 0 0 chr15 27048450 27048470 -76446504 + (A)n Simple_repeat Simple_repeat 1 20 0 7 791 1154 189 39 151 chr15 27048483 27048563 -76446411 - ORR1A2 LTR MaLR 0 394 337 7 791 2018 151 15 3 chr15 27048563 27048902 -76446072 - Lx LINE L1 0 6654 6312 7 791 1539 141 60 64 chr15 27048902 27049104 -76445870 - ORR1A2 LTR MaLR -47 280 95 7 791 638 150 0 0 chr15 27049104 27049217 -76445757 - Lx2 LINE L1 0 6997 6885 7 791 1539 141 60 64 chr15 27049217 27049295 -76445679 - ORR1A2 LTR MaLR -233 94 1 7 791 1176 330 40 35 chr15 27049383 27050395 -76444579 + L1M2 LINE L1 2846 3863 -2982 7 791 262 193 0 0 chr15 27050427 27050484 -76444490 - Lx8 LINE L1 -2 7471 7415 7 791 261 214 0 18 chr15 27050530 27050587 -76444387 + L1Md_F LINE L1 274 329 -6190 8 791 20806 88 20 1 chr15 27050585 27054463 -76440511 + L1Md_F LINE L1 301 4253 -1630 8 791 1376 201 115 13 chr15 27054465 27054773 -76440201 + MTD LTR MaLR 76 405 -14 8 791 225 264 0 0 chr15 27054894 27054947 -76440027 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 8 791 243 88 0 0 chr15 27056001 27056035 -76438939 + (TCC)n Simple_repeat Simple_repeat 1 34 0 8 791 392 358 34 7 chr15 27059144 27059293 -76435681 - RSINE1 SINE B4 -4 161 9 8 791 348 276 55 15 chr15 27060210 27060409 -76434565 + L1M4 LINE L1 14 220 -6387 8 791 408 20 0 0 chr15 27060701 27060750 -76434224 + (CA)n Simple_repeat Simple_repeat 1 49 0 8 791 369 341 94 31 chr15 27060957 27061211 -76433763 + L1M4 LINE L1 1137 1406 -5239 8 791 192 279 0 0 chr15 27061216 27061277 -76433697 + (TATATG)n Simple_repeat Simple_repeat 2 62 0 8 791 1886 258 88 12 chr15 27061297 27061874 -76433100 + Lx9 LINE L1 6347 6967 -677 8 791 1590 211 48 14 chr15 27062690 27063045 -76431929 + ORR1D2 LTR MaLR 1 367 -3 9 791 2958 76 8 5 chr15 27063045 27063444 -76431530 + MTB LTR MaLR 1 400 0 9 791 2066 182 11 27 chr15 27063668 27063932 -76431042 + ORR1B2 LTR MaLR 1 259 -108 9 791 2515 83 3 0 chr15 27063932 27064258 -76430716 - ORR1A2 LTR MaLR 0 327 1 9 791 2066 182 11 27 chr15 27064258 27064366 -76430608 + ORR1B2 LTR MaLR 260 367 0 9 791 789 314 39 29 chr15 27065616 27065895 -76429079 - B4A SINE B4 -4 288 7 9 791 292 245 0 18 chr15 27066152 27066239 -76428735 + PB1D7 SINE Alu 2 86 -63 9 791 345 62 0 0 chr15 27066502 27066550 -76428424 + (TC)n Simple_repeat Simple_repeat 1 48 0 9 791 386 136 12 0 chr15 27066560 27066641 -76428333 + (GA)n Simple_repeat Simple_repeat 2 83 0 9 791 198 0 0 0 chr15 27067329 27067351 -76427623 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 9 791 344 167 14 0 chr15 27067936 27068008 -76426966 + (TG)n Simple_repeat Simple_repeat 2 74 0 9 791 21 0 0 0 chr15 27068387 27068408 -76426566 + AT_rich Low_complexity Low_complexity 1 21 0 1 791 214 419 14 0 chr15 27068551 27068625 -76426349 + ID SINE ID 2 76 -148 1 791 324 322 72 39 chr15 27068636 27068887 -76426087 - MLT1A1 LTR MaLR -66 299 46 1 791 9966 99 9 2 chr15 27068889 27071199 -76423775 - L1_Mus3 LINE L1 -4 6634 4311 1 791 1322 257 99 9 chr15 27071215 27071549 -76423425 - ORR1D2 LTR MaLR -6 364 1 1 791 710 250 55 55 chr15 27073701 27073855 -76421119 - ID_B1 SINE B4 -24 200 38 1 791 1172 261 45 8 chr15 27073855 27074207 -76420767 + ORR1D2 LTR MaLR 2 366 -4 1 791 710 250 55 55 chr15 27074207 27074251 -76420723 - ID SINE ID -187 37 2 1 791 673 307 32 0 chr15 27074797 27075080 -76419894 - L1M2 LINE L1 -1236 4907 4616 1 791 1172 295 64 17 chr15 27075088 27075729 -76419245 + L1MA6 LINE L1 5257 5927 -373 1 791 221 0 35 0 chr15 27076042 27076071 -76418903 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 791 180 0 0 0 chr15 27078124 27078144 -76416830 + (T)n Simple_repeat Simple_repeat 1 20 0 1 791 274 339 36 73 chr15 27078282 27078419 -76416555 + MLT1J LTR MaLR 239 370 -142 1 791 2942 62 18 0 chr15 27079854 27080243 -76414731 - MTB LTR MaLR -4 396 1 1 791 1080 266 67 30 chr15 27080365 27080695 -76414279 + RMER5 LTR ERV1 37 378 -156 1 791 653 233 27 7 chr15 27081122 27081269 -76413705 + RMER5 LTR ERV1 383 532 -2 1 791 297 313 12 0 chr15 27081989 27082072 -76412902 + BC1_Mm scRNA scRNA 2 85 -67 1 791 1561 216 78 18 chr15 27082278 27082673 -76412301 - MTD LTR MaLR 0 419 1 1 791 267 31 0 0 chr15 27082917 27082949 -76412025 + (TAA)n Simple_repeat Simple_repeat 3 34 0 1 791 520 286 225 15 chr15 27082997 27083331 -76411643 + MLT1D LTR MaLR 95 498 -7 1 791 739 120 71 8 chr15 27083956 27084082 -76410892 - RMER19B LTR ERVK 0 902 769 1 791 2703 40 8 25 chr15 27084129 27084489 -76410485 + L1Md_F3 LINE L1 6231 6584 0 1 791 1749 228 62 165 chr15 27084546 27085671 -76409303 - L1_Rod LINE L1 -3484 2363 1355 1 791 467 146 31 0 chr15 27085768 27085864 -76409110 - L1_Rod LINE L1 -4493 1354 1256 1 791 1171 242 60 73 chr15 27085867 27085938 -76409036 + ORR1B2 LTR MaLR 1 69 -298 1 791 1141 88 0 0 chr15 27085938 27086085 -76408889 + B1_Mus1 SINE Alu 2 148 0 1 791 1171 242 60 73 chr15 27086085 27086111 -76408863 + ORR1B2 LTR MaLR 70 84 -283 1 791 1166 106 0 11 chr15 27086111 27086293 -76408681 + (GAAAA)n Simple_repeat Simple_repeat 1 180 0 1 791 1171 242 60 73 chr15 27086293 27086381 -76408593 + ORR1B2 LTR MaLR 85 177 -190 1 791 1022 24 8 0 chr15 27086381 27086506 -76408468 + (TCTCCC)n Simple_repeat Simple_repeat 2 127 0 1 791 1171 242 60 73 chr15 27086506 27086688 -76408286 + ORR1B2 LTR MaLR 178 364 -3 1 791 675 264 88 0 chr15 27086690 27086917 -76408057 - L1_Rod LINE L1 -6352 820 574 1 791 384 22 0 0 chr15 27086968 27087013 -76407961 + (CTTG)n Simple_repeat Simple_repeat 2 46 0 1 791 25 0 0 0 chr15 27087294 27087319 -76407655 + AT_rich Low_complexity Low_complexity 1 25 0 1 791 279 0 0 0 chr15 27088136 27088167 -76406807 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 791 747 104 0 0 chr15 27089287 27089402 -76405572 + (TG)n Simple_repeat Simple_repeat 2 116 0 1 791 1409 146 0 9 chr15 27089820 27090048 -76404926 - URR1A DNA MER1_type 0 226 1 1 791 536 42 14 0 chr15 27090132 27090203 -76404771 + (TTTTG)n Simple_repeat Simple_repeat 2 73 0 1 791 530 285 98 47 chr15 27090903 27091181 -76403793 - ORR1E LTR MaLR -106 264 1 1 791 248 111 22 0 chr15 27091216 27091261 -76403713 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 1 791 1280 113 22 49 chr15 27091305 27091529 -76403445 - Lx3_Mus LINE L1 -5 7004 6787 1 791 2605 77 3 3 chr15 27091529 27091883 -76403091 + Lx3_Mus LINE L1 6466 6819 -190 1 791 484 263 81 12 chr15 27092011 27092184 -76402790 + L2 LINE L2 2480 2664 -755 1 791 578 294 104 118 chr15 27092259 27092633 -76402341 - MLT1B LTR MaLR -21 369 1 1 791 227 352 54 27 chr15 27092747 27092896 -76402078 - L3 LINE CR1 -2397 2092 1940 1 791 438 20 0 0 chr15 27092948 27092999 -76401975 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 791 325 213 147 0 chr15 27093627 27093702 -76401272 - RLTR40 LTR ERVK -7 810 725 1 791 1519 197 46 60 chr15 27093703 27094119 -76400855 + Lx5 LINE L1 6630 7039 -11 1 791 3573 190 51 19 chr15 27094119 27094168 -76400806 - RLTR40 LTR ERVK -68 749 710 1 791 3332 62 2 22 chr15 27094168 27094613 -76400361 + L1_Mus2 LINE L1 6131 6566 0 1 791 3573 190 51 19 chr15 27094613 27095289 -76399685 - RLTR40 LTR ERVK -108 709 1 1 791 682 281 174 16 chr15 27095299 27095552 -76399422 - MTEa LTR MaLR -26 353 61 1 791 228 171 24 0 chr15 27096114 27096155 -76398819 - MT2A LTR ERVL -491 42 1 1 791 205 136 22 22 chr15 27096189 27096234 -76398740 + A-rich Low_complexity Low_complexity 3 47 0 1 791 693 292 15 10 chr15 27096455 27096659 -76398315 - B3 SINE B2 -11 205 1 1 791 1003 276 72 33 chr15 27097418 27097778 -76397196 - MTEb LTR MaLR 0 379 6 1 791 1667 84 0 78 chr15 27097948 27098206 -76396768 - ORR1A2 LTR MaLR -89 238 1 1 791 3933 297 75 41 chr15 27099052 27100252 -76394722 - ORR1E-int LTR MaLR -40 1540 290 1 791 323 78 20 0 chr15 27100252 27100303 -76394671 + (TTG)n Simple_repeat Simple_repeat 2 53 0 1 791 3933 297 75 41 chr15 27100303 27100590 -76394384 - ORR1E-int LTR MaLR -1291 289 2 1 791 837 276 89 75 chr15 27100593 27100942 -76394032 - ORR1E LTR MaLR 0 359 6 1 791 679 168 25 0 chr15 27100946 27101065 -76393909 - ORR1B2 LTR MaLR -8 359 238 1 791 341 286 69 31 chr15 27101296 27101455 -76393519 + Lx8 LINE L1 7065 7229 -244 1 791 397 59 29 14 chr15 27101807 27101876 -76393098 + (TTTTG)n Simple_repeat Simple_repeat 2 71 0 1 791 364 252 29 0 chr15 27103685 27103788 -76391186 + L1MEd LINE L1 561 666 -5453 1 791 226 258 0 0 chr15 27104259 27104321 -76390653 - MLT1G1 LTR MaLR -2 487 426 1 791 773 167 36 14 chr15 27104332 27104472 -76390502 + B1_Mus1 SINE Alu 4 146 -2 1 791 310 303 30 20 chr15 27104594 27104695 -76390279 - MLT1G1 LTR MaLR -267 312 211 1 791 1107 340 93 16 chr15 27104762 27105373 -76389601 - MLT1G1-int LTR MaLR -176 1313 656 1 791 257 256 122 0 chr15 27106101 27106191 -76388783 + L2 LINE L2 2781 2881 -538 1 791 292 338 78 32 chr15 27106275 27106584 -76388390 - MER33 DNA MER1_type -1 323 1 1 791 21 0 0 0 chr15 27106716 27106737 -76388237 + AT_rich Low_complexity Low_complexity 1 21 0 1 791 509 310 95 16 chr15 27107020 27107325 -76387649 - Lx8 LINE L1 -256 7217 6889 1 791 286 171 29 0 chr15 27107952 27108022 -76386952 + GA-rich Low_complexity Low_complexity 1 72 0 1 791 1067 263 161 10 chr15 27108813 27109302 -76385672 - L1MA6 LINE L1 -2 6298 5736 1 791 228 270 0 60 chr15 27109386 27109453 -76385521 + PB1D10 SINE Alu 24 86 -31 1 791 3454 25 2 0 chr15 27109822 27110215 -76384759 + MTA_Mm LTR MaLR 3 396 0 1 791 1409 228 48 149 chr15 27110340 27110865 -76384109 + RMER19C LTR ERVK 138 609 -2 1 791 1194 75 0 0 chr15 27110865 27111012 -76383962 + B1_Mus2 SINE Alu 1 147 0 1 791 708 247 54 16 chr15 27111123 27111308 -76383666 - MTEb LTR MaLR -6 373 182 1 791 369 0 0 0 chr15 27111308 27111349 -76383625 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1 791 22 0 0 0 chr15 27111724 27111746 -76383228 + AT_rich Low_complexity Low_complexity 1 22 0 1 791 22 0 0 0 chr15 27111761 27111783 -76383191 + AT_rich Low_complexity Low_complexity 1 22 0 1 791 2707 302 93 36 chr15 27111996 27113102 -76381872 + Lx8 LINE L1 6163 7331 -142 1 791 315 0 0 0 chr15 27113121 27113156 -76381818 + (TAA)n Simple_repeat Simple_repeat 3 37 0 1 791 38 61 0 0 chr15 27113255 27113321 -76381653 + AT_rich Low_complexity Low_complexity 1 66 0 1 791 476 318 6 31 chr15 27113376 27113538 -76381436 - RSINE1 SINE B4 -4 161 4 1 791 1710 36 5 0 chr15 27113762 27113954 -76381020 + B2_Mm1t SINE B2 1 193 0 1 791 479 132 11 0 chr15 27115323 27115414 -76379560 + (GGA)n Simple_repeat Simple_repeat 3 94 0 1 791 37 62 0 0 chr15 27116079 27116144 -76378830 + AT_rich Low_complexity Low_complexity 1 65 0 1 791 735 299 15 5 chr15 27116276 27116478 -76378496 - B3 SINE B2 -12 204 1 1 791 949 157 7 7 chr15 27118037 27118185 -76376789 + B1_Mur2 SINE Alu 1 148 -1 1 791 256 278 84 70 chr15 27119787 27119930 -76375044 + MLT1I LTR MaLR 252 396 -15 1 791 385 300 40 0 chr15 27120570 27120670 -76374304 + B1F SINE Alu 37 140 -9 1 791 499 347 47 20 chr15 27121153 27121406 -76373568 + MER121 Unknown Unknown 64 323 -89 1 791 277 350 60 0 chr15 27121575 27121675 -76373299 + B1F2 SINE Alu 37 142 -7 1 791 35020 82 12 7 chr15 27121990 27128135 -76366839 - L1Md_F2 LINE L1 0 6582 404 1 791 5339 78 0 38 chr15 27128304 27129011 -76365963 - L1Md_F2 LINE L1 -1 6581 5902 1 791 4601 73 0 0 chr15 27129012 27129590 -76365384 + L1Md_F2 LINE L1 5306 5883 0 1 791 585 155 1 0 chr15 27129603 27129706 -76365268 - ORR1C1 LTR MaLR 0 384 281 1 791 278 79 0 0 chr15 27129692 27129730 -76365244 + ORR1D1 LTR MaLR 333 370 -4 1 791 1592 258 59 20 chr15 27129739 27130183 -76364791 + Lx9 LINE L1 6845 7305 -339 1 791 1373 185 33 164 chr15 27130195 27130449 -76364525 - ORR1D1 LTR MaLR -8 366 122 1 791 714 220 13 111 chr15 27130449 27130674 -76364300 + B3 SINE B2 3 205 -11 1 791 1373 185 33 164 chr15 27130674 27130840 -76364134 - ORR1D1 LTR MaLR -253 121 1 1 791 255 103 0 0 chr15 27130841 27130880 -76364094 + (TATG)n Simple_repeat Simple_repeat 2 40 0 1 791 414 222 86 23 chr15 27130885 27131060 -76363914 + Lx9 LINE L1 7458 7643 -1 1 98 1298 48 0 0 chr15 27131763 27131910 -76363064 + B1_Mm SINE Alu 1 147 0 1 792 30 0 0 0 chr15 27131911 27131941 -76363033 + AT_rich Low_complexity Low_complexity 1 30 0 1 792 216 0 0 0 chr15 27131941 27131965 -76363009 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 1 792 249 320 15 88 chr15 27131986 27132123 -76362851 + B3A SINE B2 2 128 -70 1 792 3532 54 0 5 chr15 27132719 27133128 -76361846 - MTB_Mm LTR MaLR 0 407 1 1 792 393 325 73 39 chr15 27133540 27133745 -76361229 - LTR16C LTR ERVL -1 488 277 1 792 310 329 108 18 chr15 27133750 27133917 -76361057 - MER3 DNA MER1_type -25 184 3 1 792 240 340 81 32 chr15 27133917 27134072 -76360902 - LTR16C LTR ERVL -230 338 199 1 792 393 310 78 0 chr15 27134921 27134964 -76360010 + MLT1A1 LTR MaLR 256 302 -106 1 792 1646 172 228 14 chr15 27134964 27135311 -76359663 - MTC LTR MaLR 0 421 1 1 792 393 310 78 0 chr15 27135311 27135409 -76359565 + MLT1A1 LTR MaLR 303 407 -1 1 792 1008 76 68 8 chr15 27135452 27135585 -76359389 + B1_Mus1 SINE Alu 1 141 -7 2 792 495 0 0 0 chr15 27135602 27135657 -76359317 + (GGA)n Simple_repeat Simple_repeat 3 57 0 2 792 189 0 0 0 chr15 27135804 27135825 -76359149 + (A)n Simple_repeat Simple_repeat 1 21 0 2 792 353 109 0 15 chr15 27135823 27135869 -76359105 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 2 792 1291 62 0 11 chr15 27135869 27136049 -76358925 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 2 792 353 109 0 15 chr15 27136049 27136067 -76358907 + (GGAA)n Simple_repeat Simple_repeat 1 18 0 2 792 1099 293 18 46 chr15 27136194 27136630 -76358344 - BGLII_B LTR ERVK -17 424 1 2 792 255 31 0 0 chr15 27137589 27137621 -76357353 + (TTG)n Simple_repeat Simple_repeat 3 34 0 2 792 1136 176 9 53 chr15 27138864 27139092 -76355882 + ORR1B1 LTR MaLR 177 394 0 2 792 201 195 0 0 chr15 27139104 27139145 -76355829 + GA-rich Low_complexity Low_complexity 2 42 0 2 792 264 222 63 0 chr15 27139333 27139396 -76355578 + L1M3 LINE L1 4674 4740 -1406 2 792 683 302 127 16 chr15 27139458 27139665 -76355309 + B4A SINE B4 3 217 -75 2 792 504 86 0 0 chr15 27139665 27139735 -76355239 + (TAG)n Simple_repeat Simple_repeat 2 71 0 2 792 683 302 127 16 chr15 27139735 27139779 -76355195 + B4A SINE B4 218 282 -10 2 792 841 270 148 49 chr15 27139811 27140134 -76354840 + L1M3 LINE L1 4728 5080 -1060 2 792 1935 218 24 33 chr15 27140134 27140557 -76354417 + MTD LTR MaLR 1 419 0 2 792 841 265 116 65 chr15 27140557 27140936 -76354038 + L1M3 LINE L1 5081 5505 -786 2 792 2662 143 55 12 chr15 27140936 27141339 -76353635 - MTC LTR MaLR -1 420 1 2 792 523 257 66 88 chr15 27141339 27141461 -76353513 + L1M3 LINE L1 5506 5620 -671 2 792 3491 50 0 2 chr15 27141468 27141865 -76353109 - MTA_Mm LTR MaLR 0 396 1 2 792 354 253 10 78 chr15 27141866 27141969 -76353005 + MTEb LTR MaLR 6 101 -278 2 792 2872 154 17 6 chr15 27141970 27142446 -76352528 - MurERV4-int LTR ERVK -2396 2864 2384 2 792 365 211 173 0 chr15 27142531 27142635 -76352339 + MTEb LTR MaLR 188 309 -70 2 792 854 262 42 27 chr15 27142717 27142980 -76351994 + Lx8 LINE L1 7192 7458 -15 2 792 303 306 41 0 chr15 27143950 27144048 -76350926 + Lx7 LINE L1 7207 7308 -388 2 792 414 0 0 0 chr15 27144056 27144102 -76350872 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 792 42 36 0 0 chr15 27144295 27144351 -76350623 + AT_rich Low_complexity Low_complexity 1 56 0 2 792 420 224 0 0 chr15 27144588 27144686 -76350288 + (CATATA)n Simple_repeat Simple_repeat 1 98 0 2 792 590 313 6 6 chr15 27144908 27145088 -76349886 + B3A SINE B2 3 182 -16 2 792 417 39 0 0 chr15 27146830 27146881 -76348093 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 792 264 307 45 0 chr15 27147897 27147985 -76346989 - Lx8 LINE L1 -218 7255 7164 2 792 1165 143 116 5 chr15 27148468 27148658 -76346316 + B3 SINE B2 4 214 -2 2 792 204 67 0 0 chr15 27148738 27148768 -76346206 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 2 792 288 0 0 0 chr15 27148801 27148833 -76346141 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2 792 517 119 0 35 chr15 27148833 27148909 -76346065 - B1_Mm SINE Alu -8 139 64 2 792 4414 52 2 2 chr15 27149519 27150022 -76344952 + RLTR1C LTR ERV1 1 503 0 2 792 222 371 55 24 chr15 27150169 27150296 -76344678 - MER5B DNA MER1_type -30 148 18 2 792 284 354 78 36 chr15 27150563 27150708 -76344266 - MamRep4096 DNA hAT? -38 388 231 2 792 4300 152 129 72 chr15 27150708 27151561 -76343413 + RMER19B LTR ERVK 1 902 0 2 792 284 354 78 36 chr15 27151561 27151723 -76343251 - MamRep4096 DNA hAT? -196 230 69 2 792 1928 221 21 35 chr15 27151923 27152350 -76342624 - MTC LTR MaLR 0 421 1 2 792 198 0 0 0 chr15 27152504 27152526 -76342448 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 792 531 275 243 35 chr15 27152958 27153361 -76341613 + L1MA5 LINE L1 5532 6018 -282 2 792 292 278 137 38 chr15 27154728 27154859 -76340115 + RMER21A LTR ERV1 541 684 -263 2 792 784 256 66 39 chr15 27155065 27155321 -76339653 - MER2 DNA MER2_type -1 344 82 2 792 426 271 56 9 chr15 27155358 27155466 -76339508 - Lx7 LINE L1 -1026 6670 6558 2 792 2358 230 48 18 chr15 27155679 27156242 -76338732 + Lx9 LINE L1 6778 7357 -287 2 792 7509 159 17 58 chr15 27156246 27156594 -76338380 - RLTR21 LTR ERVK -4 1568 1243 2 792 222 37 0 0 chr15 27156594 27156621 -76338353 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 2 792 7509 159 17 58 chr15 27156621 27157659 -76337315 - RLTR21 LTR ERVK -330 1242 246 2 792 426 39 0 0 chr15 27157659 27157711 -76337263 + (TTG)n Simple_repeat Simple_repeat 3 54 0 2 792 7509 159 17 58 chr15 27157711 27157809 -76337165 - RLTR21 LTR ERVK -1327 245 144 2 792 9533 70 23 9 chr15 27157809 27158671 -76336303 + Lx3_Mus LINE L1 5036 5906 -1103 2 792 450 0 0 0 chr15 27158671 27158721 -76336253 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 792 9533 88 27 32 chr15 27158721 27159158 -76335816 + Lx3_Mus LINE L1 5907 6338 -671 2 792 5101 118 20 67 chr15 27159158 27160000 -76334974 - RLTR13B4 LTR ERVK 0 803 1 2 792 9533 88 27 32 chr15 27160000 27160662 -76334312 + Lx3_Mus LINE L1 6339 7000 -9 2 792 988 189 16 11 chr15 27160662 27160844 -76334130 - RLTR21 LTR ERVK -1389 183 1 2 792 964 204 77 15 chr15 27160845 27161118 -76333856 + Lx9 LINE L1 7353 7642 -2 2 792 635 272 195 8 chr15 27165067 27165308 -76329666 + B4A SINE B4 7 292 0 2 792 237 173 19 19 chr15 27165387 27165440 -76329534 + GA-rich Low_complexity Low_complexity 4 56 0 2 792 293 340 76 21 chr15 27165480 27165717 -76329257 - L1MC4 LINE L1 0 8042 7793 2 792 2240 120 3 104 chr15 27166501 27166804 -76328170 - ORR1A2 LTR MaLR 0 327 58 2 792 1247 75 0 0 chr15 27166804 27166951 -76328023 - B1_Mur4 SINE Alu -1 149 3 2 792 2240 120 3 104 chr15 27166951 27167011 -76327963 - ORR1A2 LTR MaLR -270 57 1 2 792 21 0 0 0 chr15 27167902 27167923 -76327051 + AT_rich Low_complexity Low_complexity 1 21 0 2 792 629 209 6 0 chr15 27168360 27168518 -76326456 + (TATG)n Simple_repeat Simple_repeat 4 162 0 2 792 317 317 0 19 chr15 27168518 27168624 -76326350 + CT-rich Low_complexity Low_complexity 1 104 0 2 792 610 290 104 35 chr15 27170006 27170352 -76324622 - L1MA6 LINE L1 0 6300 5931 2 792 555 297 59 101 chr15 27170572 27170947 -76324027 + ORR1E LTR MaLR 1 359 0 2 792 317 217 14 0 chr15 27171252 27171321 -76323653 + MTD LTR MaLR 10 79 -342 2 792 517 196 116 0 chr15 27171316 27171454 -76323520 + MTD LTR MaLR 265 418 -1 2 792 2836 226 137 6 chr15 27172755 27173473 -76321501 + Lx9 LINE L1 6594 7405 -239 2 792 450 226 90 57 chr15 27173484 27173606 -76321368 - Lx9 LINE L1 -428 7216 7091 2 792 450 0 0 0 chr15 27173607 27173657 -76321317 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 792 468 0 0 0 chr15 27173657 27173708 -76321266 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 792 242 111 22 0 chr15 27173710 27173755 -76321219 + Lx9 LINE L1 7530 7575 -69 2 792 387 171 0 0 chr15 27173823 27173899 -76321075 + (TG)n Simple_repeat Simple_repeat 2 77 0 2 792 277 216 13 13 chr15 27173899 27173974 -76321000 + (TA)n Simple_repeat Simple_repeat 1 75 0 2 792 181 53 0 73 chr15 27173974 27174015 -76320959 + (TTATA)n Simple_repeat Simple_repeat 2 39 0 2 792 258 252 131 0 chr15 27174034 27174133 -76320841 + L1M1 LINE L1 5779 5890 -410 2 792 2245 175 36 24 chr15 27174455 27174871 -76320103 + MTC LTR MaLR 1 421 0 2 792 24 0 0 0 chr15 27174922 27174946 -76320028 + AT_rich Low_complexity Low_complexity 1 24 0 2 792 415 310 20 14 chr15 27175240 27175387 -76319587 - B1F SINE Alu -1 148 1 2 792 21 57 0 0 chr15 27175500 27175535 -76319439 + AT_rich Low_complexity Low_complexity 1 35 0 2 792 1112 85 4 0 chr15 27175547 27175818 -76319156 + (TAGA)n Simple_repeat Simple_repeat 1 272 0 2 792 396 0 0 0 chr15 27175863 27175907 -76319067 + (TATG)n Simple_repeat Simple_repeat 2 45 0 2 792 711 0 0 0 chr15 27178291 27178370 -76316604 + (TTC)n Simple_repeat Simple_repeat 3 81 0 2 792 709 239 26 87 chr15 27178457 27178686 -76316288 - B3 SINE B2 0 216 2 2 792 1893 254 60 67 chr15 27178736 27179407 -76315567 + Lx8 LINE L1 6806 7471 -2 2 792 306 0 0 0 chr15 27179439 27179473 -76315501 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 792 1379 174 71 90 chr15 27180112 27180479 -76314495 + Lx5 LINE L1 6691 7050 0 2 792 692 173 22 0 chr15 27180525 27180664 -76314310 - URR1B DNA MER1_type 0 225 84 2 792 21 36 0 0 chr15 27181323 27181351 -76313623 + AT_rich Low_complexity Low_complexity 1 28 0 2 792 253 308 67 17 chr15 27181785 27181904 -76313070 + L4 LINE RTE 926 1050 -979 2 792 546 16 0 0 chr15 27182709 27182772 -76312202 + (TGGA)n Simple_repeat Simple_repeat 3 65 0 2 792 294 179 0 0 chr15 27183260 27183316 -76311658 + GA-rich Low_complexity Low_complexity 1 56 0 2 792 479 310 86 78 chr15 27183901 27184170 -76310804 + B4A SINE B4 3 273 -19 2 792 459 0 0 0 chr15 27184664 27184715 -76310259 + (TTA)n Simple_repeat Simple_repeat 1 51 0 2 792 235 286 206 7 chr15 27185173 27185328 -76309646 - RMER20B LTR ERVK -261 366 181 2 792 7779 72 1 2 chr15 27185975 27187218 -76307756 - L1_Mus1 LINE L1 0 6567 5327 2 792 2155 99 4 1 chr15 27187223 27187534 -76307440 + L1_Mus1 LINE L1 5018 5356 -815 2 792 231 269 45 0 chr15 27187677 27187744 -76307230 - L1MD3 LINE L1 -585 7410 7341 2 792 204 152 0 21 chr15 27187874 27187921 -76307053 + T-rich Low_complexity Low_complexity 4 49 0 2 792 483 232 45 84 chr15 27187925 27188080 -76306894 - B1F2 SINE Alu 0 149 1 2 792 210 91 0 0 chr15 27188819 27188852 -76306122 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 792 197 200 68 54 chr15 27188985 27189059 -76305915 - MIRm SINE MIR -121 155 81 2 792 962 59 0 0 chr15 27189114 27189233 -76305741 - L1_Mus3 LINE L1 -416 6220 6102 2 792 2584 122 5 2 chr15 27189233 27189629 -76305345 + L1_Mus3 LINE L1 6242 6638 0 2 792 430 186 0 0 chr15 27190657 27190727 -76304247 + ID2 SINE ID 1 70 -13 2 792 263 353 25 5 chr15 27190796 27190994 -76303980 - RMER15 LTR ERVL -10 565 337 2 792 313 274 131 69 chr15 27191246 27191520 -76303454 - L1MB8 LINE L1 -13 6165 5875 2 792 276 328 0 57 chr15 27192332 27192455 -76302519 - MLT2B4 LTR ERVL -398 158 43 2 792 332 297 90 0 chr15 27192538 27192649 -76302325 + PB1 SINE Alu 5 125 -2 2 792 866 34 8 0 chr15 27192659 27192776 -76302198 + L1Md_A LINE L1 6464 6581 -1 2 792 1776 142 111 6 chr15 27192911 27193244 -76301730 - MTC LTR MaLR -8 413 46 2 792 228 304 38 0 chr15 27193749 27193828 -76301146 - B1F SINE Alu -19 130 49 3 792 838 121 64 0 chr15 27193828 27193969 -76301005 - B2_Mm2 SINE B2 -45 150 1 3 792 500 81 14 0 chr15 27194076 27194150 -76300824 + (CATA)n Simple_repeat Simple_repeat 4 78 0 3 792 566 264 57 0 chr15 27194170 27194310 -76300664 + MLT1B LTR MaLR 4 151 -239 3 792 555 301 46 38 chr15 27194380 27194618 -76300356 + MLT1B LTR MaLR 144 383 -7 3 792 821 306 78 68 chr15 27194905 27195434 -76299540 + RMER5 LTR ERV1 1 534 0 3 792 1025 137 11 0 chr15 27195689 27195864 -76299110 + RLTR31A_Mm LTR ERVK 1 177 -407 3 792 3316 151 127 46 chr15 27195866 27196734 -76298240 - RMER17B LTR ERVK 0 906 1 3 792 912 139 11 11 chr15 27196734 27196908 -76298066 + RLTR31A_Mm LTR ERVK 174 347 -237 3 792 322 246 99 40 chr15 27197152 27197220 -76297754 - L1MCa LINE L1 -4623 1885 1813 3 792 1054 234 101 53 chr15 27197220 27197480 -76297494 - ORR1D1 LTR MaLR 0 374 94 3 792 234 0 0 0 chr15 27197480 27197506 -76297468 + (CAA)n Simple_repeat Simple_repeat 1 26 0 3 792 1054 234 101 53 chr15 27197506 27197602 -76297372 - ORR1D1 LTR MaLR -281 93 1 3 792 322 246 99 40 chr15 27197602 27197685 -76297289 - L1MCa LINE L1 -4696 1812 1726 3 792 425 282 32 37 chr15 27197744 27197932 -76297042 + L1MC LINE L1 5581 5767 -2018 3 792 4011 119 35 66 chr15 27198904 27199679 -76295295 - RMER17A LTR ERVK 0 751 1 3 792 216 0 0 0 chr15 27199958 27199982 -76294992 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 792 215 375 51 20 chr15 27200822 27200920 -76294054 + L2a LINE L2 2994 3094 -332 3 792 614 248 14 0 chr15 27202402 27202543 -76292431 + B1_Mus1 SINE Alu 1 143 -5 3 792 711 88 26 0 chr15 27202563 27202676 -76292298 + ORR1B1 LTR MaLR 30 145 -249 3 792 189 0 0 0 chr15 27202686 27202707 -76292267 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 3 792 1210 116 35 0 chr15 27202826 27202999 -76291975 - B2_Mm1t SINE B2 -14 179 1 3 792 1346 169 23 15 chr15 27203000 27203167 -76291807 + ORR1B1 LTR MaLR 134 298 -96 3 792 853 169 23 23 chr15 27203167 27203343 -76291631 + L1Md_F2 LINE L1 6406 6581 -1 3 792 1346 169 23 15 chr15 27203343 27203434 -76291540 + ORR1B1 LTR MaLR 299 392 -2 3 792 2863 16 0 0 chr15 27203583 27203905 -76291069 - RLTRETN_Mm LTR ERVK 0 322 1 3 792 41507 29 4 6 chr15 27203905 27208760 -76286214 - MMETn-int LTR ERVK 0 4844 1 3 792 2840 22 0 0 chr15 27208760 27209082 -76285892 - RLTRETN_Mm LTR ERVK 0 322 1 3 792 380 329 89 37 chr15 27209718 27209964 -76285010 - MLT1H LTR MaLR -196 353 95 3 792 545 138 0 155 chr15 27210315 27210444 -76284530 + ORR1A4 LTR MaLR 1 109 -220 3 792 1695 188 58 24 chr15 27210448 27210824 -76284150 + Lx6 LINE L1 5608 5996 -1464 3 792 6297 213 53 3 chr15 27210805 27211344 -76283630 + Lx6 LINE L1 6178 6738 -722 3 792 405 0 0 0 chr15 27211344 27211389 -76283585 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 3 792 6297 213 53 3 chr15 27211389 27212063 -76282911 + Lx6 LINE L1 6739 7452 -8 3 792 1122 209 9 19 chr15 27212098 27212313 -76282661 + B3 SINE B2 3 215 -1 3 792 255 298 31 31 chr15 27213459 27213556 -76281418 + ID_B1 SINE B4 79 175 -49 3 792 425 168 95 0 chr15 27213476 27213571 -76281403 + PB1D7 SINE Alu 9 112 -8 3 792 362 268 22 104 chr15 27213778 27213961 -76281013 - B4A SINE B4 -124 168 1 3 792 241 314 0 45 chr15 27214526 27214636 -76280338 + C-rich Low_complexity Low_complexity 1 105 0 3 792 22 0 0 0 chr15 27215346 27215368 -76279606 + AT_rich Low_complexity Low_complexity 1 22 0 3 792 248 164 36 0 chr15 27215734 27215789 -76279185 - MTE2b LTR MaLR 0 379 323 3 792 1954 100 3 73 chr15 27215914 27216271 -76278703 - IAPLTR1a_Mm LTR ERVK -5 332 1 3 792 59306 11 2 5 chr15 27216271 27222766 -76272208 - IAPEz-int LTR ERVK 0 6481 9 3 792 2122 102 3 72 chr15 27222766 27223126 -76271848 - IAPLTR1a_Mm LTR ERVK -2 335 1 3 792 1551 180 30 0 chr15 27223206 27223534 -76271440 + L1_Mur2 LINE L1 1364 1701 -4176 3 792 7055 174 43 33 chr15 27223934 27225145 -76269829 + L1_Mur2 LINE L1 836 2041 -3836 3 792 519 17 0 0 chr15 27225145 27225205 -76269769 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 792 7055 166 40 5 chr15 27225205 27225764 -76269210 + L1_Mur2 LINE L1 2042 2630 -3247 3 792 1400 217 12 19 chr15 27225764 27226088 -76268886 + RMER19C LTR ERVK 290 611 0 3 792 224 329 13 0 chr15 27226458 27226534 -76268440 - ID4 SINE ID -1 82 6 3 792 319 281 72 12 chr15 27226707 27226790 -76268184 + B3A SINE B2 70 157 -41 3 792 23 33 0 0 chr15 27226793 27226823 -76268151 + AT_rich Low_complexity Low_complexity 1 30 0 3 792 612 125 0 0 chr15 27226893 27226989 -76267985 + (TA)n Simple_repeat Simple_repeat 1 96 0 3 792 23 33 0 0 chr15 27227121 27227151 -76267823 + AT_rich Low_complexity Low_complexity 1 30 0 3 792 453 254 21 48 chr15 27227221 27227366 -76267608 + MTEb LTR MaLR 229 369 -10 3 792 261 192 0 37 chr15 27227369 27227423 -76267551 + PB1D7 SINE Alu 69 120 0 3 792 1729 169 84 3 chr15 27227673 27228030 -76266944 + ORR1B1 LTR MaLR 1 386 -8 3 792 818 249 0 91 chr15 27228289 27228519 -76266455 - B3 SINE B2 -7 209 1 3 792 506 259 157 12 chr15 27229787 27230029 -76264945 - MER89 LTR ERV1 -86 473 197 3 792 372 43 0 0 chr15 27230231 27230277 -76264697 + (TTTTG)n Simple_repeat Simple_repeat 3 48 0 3 792 511 162 149 33 chr15 27230277 27230398 -76264576 - B1_Mus2 SINE Alu -4 143 9 3 792 2497 155 14 17 chr15 27230872 27231292 -76263682 + Lx4A LINE L1 6633 7051 -7 3 792 330 87 0 0 chr15 27232246 27232292 -76262682 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 792 804 238 93 10 chr15 27232429 27232633 -76262341 + ID_B1 SINE B4 4 224 0 3 792 351 0 0 0 chr15 27232836 27232875 -76262099 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 792 1485 157 124 3 chr15 27233720 27234026 -76260948 + ORR1C2 LTR MaLR 42 384 0 3 792 315 0 0 0 chr15 27235886 27235921 -76259053 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 792 247 216 20 0 chr15 27236079 27236130 -76258844 + Lx8 LINE L1 6700 6751 -722 3 792 1051 280 169 8 chr15 27236179 27236594 -76258380 + Lx8 LINE L1 6888 7364 -109 3 792 333 0 0 0 chr15 27236594 27236631 -76258343 + (GGTTG)n Simple_repeat Simple_repeat 3 39 0 3 792 1051 280 169 8 chr15 27236631 27236687 -76258287 + Lx8 LINE L1 7365 7435 -38 3 792 272 174 68 135 chr15 27236902 27237035 -76257939 - Lx9 LINE L1 -1 7643 7520 3 792 231 235 0 0 chr15 27237038 27237089 -76257885 + Lx9 LINE L1 7208 7258 -386 3 792 276 210 81 0 chr15 27237477 27237539 -76257435 + ORR1D1 LTR MaLR 3 69 -305 3 792 869 181 20 49 chr15 27237522 27237649 -76257325 + ORR1D1 LTR MaLR 176 300 -74 3 792 4789 56 2 3 chr15 27237649 27238237 -76256737 + LTRIS_Mus LTR ERV1 1 587 0 3 792 869 181 20 49 chr15 27238237 27238312 -76256662 + ORR1D1 LTR MaLR 301 372 -2 3 792 3500 74 44 24 chr15 27238787 27239158 -76255816 - Lx LINE L1 0 6654 6273 3 792 3026 66 20 2 chr15 27239158 27239551 -76255423 + MTB LTR MaLR 1 400 0 3 792 3500 74 44 24 chr15 27239551 27239679 -76255295 - Lx LINE L1 -382 6272 6145 3 792 3590 101 38 0 chr15 27239679 27240280 -76254694 + L1_Mus4 LINE L1 5493 6113 -523 3 792 491 299 14 28 chr15 27240716 27240857 -76254117 - RSINE1 SINE B4 -24 141 3 3 792 472 230 0 12 chr15 27241530 27241693 -76253281 + (TG)n Simple_repeat Simple_repeat 2 162 0 3 792 258 167 0 0 chr15 27241721 27241781 -76253193 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 792 8044 12 0 0 chr15 27242395 27243291 -76251683 + L1Md_T LINE L1 4691 5586 -297 3 792 8632 31 0 5 chr15 27243291 27244291 -76250683 + L1Md_T LINE L1 5587 6581 -1 3 792 503 262 13 46 chr15 27244719 27244871 -76250103 + B3 SINE B2 64 210 -6 3 792 331 167 0 0 chr15 27245137 27245203 -76249771 + tRNA-Thr-ACY tRNA tRNA 1 66 -11 3 792 264 137 0 0 chr15 27245465 27245516 -76249458 + (T)n Simple_repeat Simple_repeat 1 51 0 3 792 982 110 0 40 chr15 27245538 27245690 -76249284 - B1_Mus2 SINE Alu 0 147 2 3 792 749 176 0 6 chr15 27245804 27245981 -76248993 + (CA)n Simple_repeat Simple_repeat 2 177 0 3 792 292 209 11 11 chr15 27246339 27246431 -76248543 + (TA)n Simple_repeat Simple_repeat 1 92 0 3 792 641 210 58 126 chr15 27246512 27246806 -76248168 - Lx9 LINE L1 -124 7520 7247 3 792 354 246 34 34 chr15 27246811 27246958 -76248016 + MER31A LTR ERV1 200 346 -139 3 792 428 93 13 0 chr15 27246958 27247033 -76247941 + (CA)n Simple_repeat Simple_repeat 2 77 0 3 792 585 273 21 69 chr15 27247166 27247355 -76247619 + B3A SINE B2 2 181 -17 3 792 21 0 0 0 chr15 27247360 27247381 -76247593 + AT_rich Low_complexity Low_complexity 1 21 0 3 792 180 97 0 0 chr15 27247620 27247651 -76247323 + (CCCCCA)n Simple_repeat Simple_repeat 3 33 0 3 792 346 108 13 13 chr15 27247906 27247981 -76246993 + (TTTG)n Simple_repeat Simple_repeat 2 76 0 3 792 540 302 165 4 chr15 27248309 27248575 -76246399 + MLT1B LTR MaLR 7 315 -75 3 792 483 287 58 7 chr15 27248805 27248942 -76246032 - RSINE1 SINE B4 -21 144 1 3 792 266 277 31 0 chr15 27248987 27249052 -76245922 + ID_B1 SINE B4 70 136 -88 3 792 243 274 134 21 chr15 27249006 27249103 -76245871 + PB1D10 SINE Alu 10 117 0 3 792 415 267 29 0 chr15 27249144 27249249 -76245725 - PB1D10 SINE Alu -7 110 3 3 792 2886 151 7 4 chr15 27249558 27250012 -76244962 + Lx2B LINE L1 6533 6987 -13 3 792 863 283 14 32 chr15 27250569 27250850 -76244124 + B4 SINE B4 1 276 -16 3 792 1046 133 113 52 chr15 27251246 27251476 -76243498 + Lx3C LINE L1 6732 6975 -1 3 792 324 287 10 41 chr15 27252592 27252690 -76242284 + PB1D10 SINE Alu 6 100 -17 3 792 602 320 121 0 chr15 27252726 27252932 -76242042 + B4A SINE B4 1 231 -61 3 792 441 0 0 0 chr15 27252973 27253022 -76241952 + (TC)n Simple_repeat Simple_repeat 1 49 0 3 792 333 0 0 0 chr15 27253022 27253058 -76241916 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 792 890 199 9 67 chr15 27254080 27254290 -76240684 + B3A SINE B2 1 198 0 3 792 254 254 60 0 chr15 27255433 27255530 -76239444 + MIR SINE MIR 85 200 -68 3 792 272 184 20 0 chr15 27259563 27259612 -76235362 + ID4 SINE ID 7 56 -27 3 792 1428 188 42 42 chr15 27259803 27260159 -76234815 + Lx3C LINE L1 6621 6976 0 3 792 506 286 74 47 chr15 27260238 27260495 -76234479 + L3 LINE CR1 1989 2252 -2237 3 792 6016 94 50 27 chr15 27260619 27261555 -76233419 + RMER17B LTR ERVK 1 958 0 3 792 224 196 0 38 chr15 27261775 27261828 -76233146 + CT-rich Low_complexity Low_complexity 2 52 0 3 792 288 202 238 0 chr15 27261944 27262028 -76232946 - ID_B1 SINE B4 0 224 121 3 792 221 253 111 81 chr15 27261946 27262045 -76232929 - PB1 SINE Alu -2 125 24 3 793 540 293 15 0 chr15 27263228 27263361 -76231613 + ID_B1 SINE B4 80 214 -10 4 793 943 277 41 48 chr15 27264338 27264691 -76230283 + MTE2a LTR MaLR 53 418 -1 4 793 300 53 0 0 chr15 27265231 27265269 -76229705 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 793 180 333 16 0 chr15 27265777 27265840 -76229134 + MIR3 SINE MIR 91 154 -54 4 793 25 0 0 28 chr15 27265982 27266006 -76228968 + AT_rich Low_complexity Low_complexity 1 24 0 4 793 885 178 189 27 chr15 27266006 27266191 -76228783 - B3 SINE B2 0 216 2 4 793 25 0 0 28 chr15 27266191 27266202 -76228772 + AT_rich Low_complexity Low_complexity 1 11 0 4 793 233 309 60 0 chr15 27266304 27266388 -76228586 - MER5A1 DNA MER1_type -49 117 29 4 793 594 305 128 31 chr15 27266563 27266945 -76228029 - Lx9 LINE L1 -206 7438 7020 4 793 1041 293 39 24 chr15 27266946 27267359 -76227615 + L1_Mur3 LINE L1 4092 4510 -1370 4 793 405 313 30 30 chr15 27267399 27267534 -76227440 + Lx9 LINE L1 6306 6440 -1204 4 793 1011 176 53 10 chr15 27267534 27267741 -76227233 - ORR1D1 LTR MaLR -158 216 1 4 793 423 0 0 0 chr15 27267780 27267827 -76227147 + (TTGG)n Simple_repeat Simple_repeat 1 47 0 4 793 731 182 0 0 chr15 27267840 27267966 -76227008 - B1_Mus1 SINE Alu -7 141 16 4 793 447 336 124 11 chr15 27268034 27268308 -76226666 + MLT1A0 LTR MaLR 59 363 -2 4 793 641 281 28 95 chr15 27268490 27268773 -76226201 - MER31B LTR ERV1 -121 345 82 4 793 236 306 11 23 chr15 27268889 27268976 -76225998 + L1MB3 LINE L1 6075 6160 -23 4 793 458 32 0 0 chr15 27269670 27269732 -76225242 - L1Md_T LINE L1 -1 6581 6520 4 793 921 123 0 0 chr15 27271803 27271982 -76222992 + (TC)n Simple_repeat Simple_repeat 1 179 0 4 793 339 319 72 0 chr15 27272112 27272250 -76222724 + RSINE1 SINE B4 3 150 -15 4 793 21 0 0 0 chr15 27272748 27272769 -76222205 + AT_rich Low_complexity Low_complexity 1 21 0 4 793 263 47 0 0 chr15 27273195 27273231 -76221743 - L1Md_F2 LINE L1 -502 6080 6045 4 793 4203 34 4 12 chr15 27273231 27273732 -76221242 + L1Md_F2 LINE L1 6074 6570 -12 4 793 188 103 0 49 chr15 27274412 27274453 -76220521 + A-rich Low_complexity Low_complexity 1 39 0 4 793 2400 231 43 22 chr15 27274464 27275276 -76219698 + Lx6 LINE L1 6455 7459 -1 4 793 1732 143 22 103 chr15 27275317 27275675 -76219299 + ORR1A4 LTR MaLR 1 329 0 4 793 343 312 109 50 chr15 27275683 27275885 -76219089 + B4A SINE B4 5 218 -74 4 793 480 35 0 0 chr15 27276575 27276633 -76218341 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 793 914 166 6 0 chr15 27276700 27276875 -76218099 + GA-rich Low_complexity Low_complexity 3 178 0 4 793 261 139 0 0 chr15 27276894 27276937 -76218037 + (GGA)n Simple_repeat Simple_repeat 3 45 0 4 793 1422 58 0 0 chr15 27276937 27277351 -76217623 + (GAA)n Simple_repeat Simple_repeat 1 414 0 4 793 513 307 28 11 chr15 27277973 27278151 -76216823 + B3A SINE B2 3 183 -15 4 793 374 321 121 6 chr15 27278199 27278365 -76216609 + B3A SINE B2 12 196 -2 4 793 256 328 51 17 chr15 27278547 27278665 -76216309 - MLT1G1 LTR MaLR -9 570 449 4 793 4332 66 4 0 chr15 27279072 27279617 -76215357 + L1_Mus2 LINE L1 6020 6566 0 4 793 484 263 57 38 chr15 27280121 27280279 -76214695 + RSINE1 SINE B4 4 164 -1 4 793 311 96 19 0 chr15 27280283 27280335 -76214639 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 4 793 891 270 0 0 chr15 27280344 27280559 -76214415 - B3 SINE B2 0 216 2 4 793 634 193 0 0 chr15 27280605 27280714 -76214260 - B1_Mur1 SINE Alu 0 149 41 4 793 470 7 137 0 chr15 27280715 27280854 -76214120 + (CCTG)n Simple_repeat Simple_repeat 2 159 0 4 793 277 132 56 19 chr15 27280858 27280912 -76214062 - B1F2 SINE Alu -91 58 3 4 793 3461 148 37 15 chr15 27281013 27281500 -76213474 + Lx LINE L1 6034 6518 -136 4 793 240 35 0 0 chr15 27281500 27281529 -76213445 + (TGGG)n Simple_repeat Simple_repeat 1 29 0 4 793 3461 148 37 15 chr15 27281529 27281636 -76213338 + Lx LINE L1 6519 6639 -15 4 793 3709 42 0 11 chr15 27281790 27282246 -76212728 + L1Md_F2 LINE L1 6132 6582 0 4 793 455 200 91 8 chr15 27282278 27282399 -76212575 + Lx4B LINE L1 6924 7054 -4 4 793 267 289 26 0 chr15 27282552 27282628 -76212346 + ID4 SINE ID 2 79 -4 4 793 236 265 131 10 chr15 27282664 27282763 -76212211 + MLT1A0 LTR MaLR 193 303 -62 4 793 246 278 27 40 chr15 27283594 27283669 -76211305 + L1MDa LINE L1 666 739 -5894 4 793 363 270 70 0 chr15 27283780 27283880 -76211094 - B3 SINE B2 -101 115 9 4 793 211 72 23 23 chr15 27284231 27284274 -76210700 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 793 714 147 23 0 chr15 27284281 27284410 -76210564 + URR1A DNA MER1_type 81 212 -14 4 793 304 273 0 0 chr15 27284926 27285003 -76209971 + MER5A DNA MER1_type 105 181 -8 4 793 574 264 61 6 chr15 27286930 27287094 -76207880 + B3 SINE B2 2 174 -42 4 793 1112 235 47 42 chr15 27287127 27287571 -76207403 - MT2A LTR ERVL -48 553 1 4 793 610 259 59 0 chr15 27287677 27287812 -76207162 + B1_Mur1 SINE Alu 2 144 -5 4 793 441 0 0 0 chr15 27287814 27287863 -76207111 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 793 276 186 0 0 chr15 27288084 27288143 -76206831 + (GATTG)n Simple_repeat Simple_repeat 4 62 0 4 793 210 37 0 0 chr15 27288994 27289021 -76205953 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 793 227 343 0 0 chr15 27289201 27289271 -76205703 - PB1D10 SINE Alu -8 109 40 4 793 435 38 0 0 chr15 27289443 27289496 -76205478 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 793 270 347 0 0 chr15 27289831 27289926 -76205048 + GA-rich Low_complexity Low_complexity 4 98 0 4 793 377 273 67 15 chr15 27290582 27290716 -76204258 + MLT2C1 LTR ERVL 85 225 -172 4 793 324 119 0 0 chr15 27292099 27292158 -76202816 + (T)n Simple_repeat Simple_repeat 1 59 0 4 793 1339 208 57 65 chr15 27292865 27293185 -76201789 + ORR1C2 LTR MaLR 2 320 -64 4 793 1702 16 5 0 chr15 27293185 27293377 -76201597 - B2_Mm1a SINE B2 0 193 1 4 793 1339 208 57 65 chr15 27293377 27293442 -76201532 + ORR1C2 LTR MaLR 321 384 0 4 793 319 264 95 58 chr15 27293890 27294164 -76200810 + L1MEg LINE L1 1703 1986 -4256 4 793 439 314 75 47 chr15 27294338 27294552 -76200422 - MER31B LTR ERV1 -246 220 1 4 793 661 222 148 11 chr15 27294610 27294792 -76200182 + B3 SINE B2 1 207 -9 4 793 296 304 48 42 chr15 27294802 27294970 -76200004 + L1MEg LINE L1 3559 3727 -2419 4 793 615 342 105 31 chr15 27294984 27295433 -76199541 + MER90a LTR ERV1 11 492 -122 4 793 1090 213 14 0 chr15 27295484 27295691 -76199283 + B3 SINE B2 1 210 -6 4 793 235 219 95 14 chr15 27295727 27295801 -76199173 - B1F2 SINE Alu -66 83 4 4 793 251 216 0 0 chr15 27296117 27296168 -76198806 + PB1 SINE Alu 72 122 -5 4 793 607 313 11 0 chr15 27296259 27296438 -76198536 + MLT1A0 LTR MaLR 137 317 -48 4 793 1868 163 107 13 chr15 27296959 27297344 -76197630 + MTC LTR MaLR 1 421 0 4 793 406 247 135 39 chr15 27297525 27297681 -76197293 - MTE2a LTR MaLR -13 366 196 4 793 289 252 113 28 chr15 27299359 27299465 -76195509 + PB1D9 SINE Alu 6 120 0 4 793 258 136 45 0 chr15 27299578 27299622 -76195352 - PB1 SINE Alu -18 109 64 4 793 315 0 0 0 chr15 27299766 27299801 -76195173 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 4 793 1270 89 28 6 chr15 27300415 27300595 -76194379 - B2_Mm2 SINE B2 -11 184 1 4 793 1019 248 61 25 chr15 27301565 27301842 -76193132 - Lx5 LINE L1 -235 6815 6529 4 793 776 161 2 2 chr15 27301868 27301997 -76192977 + B3 SINE B2 1 126 -90 4 793 195 42 0 0 chr15 27301997 27302021 -76192953 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 793 480 237 68 68 chr15 27302021 27302081 -76192893 + B2_Mm1t SINE B2 120 189 -4 4 793 360 302 62 49 chr15 27302140 27302384 -76192590 + L1M5 LINE L1 5488 5734 -439 4 793 3433 35 2 0 chr15 27302760 27303155 -76191819 + MTA_Mm LTR MaLR 1 396 0 4 793 271 273 0 0 chr15 27303173 27303239 -76191735 - tRNA-Ala-GCY_ tRNA tRNA -8 67 2 4 793 303 237 176 49 chr15 27303269 27303371 -76191603 - PB1D9 SINE Alu 0 120 6 4 793 240 130 0 0 chr15 27304074 27304120 -76190854 + (TTTTTG)n Simple_repeat Simple_repeat 6 51 0 4 793 1231 30 18 6 chr15 27304223 27304392 -76190582 - L1_Mus3 LINE L1 0 6638 6468 4 793 2564 114 52 3 chr15 27305398 27305786 -76189188 - MTB_Mm LTR MaLR 0 407 1 4 793 345 219 28 27 chr15 27306776 27306885 -76188089 - PB1D10 SINE Alu -1 116 13 4 793 1288 201 162 12 chr15 27306966 27307318 -76187656 + MTD LTR MaLR 6 419 0 4 793 431 259 9 0 chr15 27307402 27307510 -76187464 + PB1D10 SINE Alu 3 111 -6 4 793 601 174 7 34 chr15 27307825 27307974 -76187000 - Lx2B LINE L1 -3 6997 6853 4 793 722 171 41 106 chr15 27307987 27308157 -76186817 - Lx3C LINE L1 -465 6511 6353 4 793 945 48 0 0 chr15 27308236 27308361 -76186613 - B1_Mus2 SINE Alu -21 126 2 4 793 350 211 11 43 chr15 27309385 27309479 -76185495 + PB1D10 SINE Alu 1 91 -26 4 793 1483 176 81 31 chr15 27309486 27309868 -76185106 - RMER17C LTR ERVK -9 401 1 4 793 774 209 7 18 chr15 27309888 27310173 -76184801 + GA-rich Low_complexity Low_complexity 1 281 0 4 793 288 288 12 12 chr15 27310213 27310294 -76184680 + ID4_ SINE ID 3 83 0 4 793 180 111 0 0 chr15 27310567 27310594 -76184380 + (A)n Simple_repeat Simple_repeat 1 27 0 4 793 232 250 15 0 chr15 27311494 27311562 -76183412 - MIR SINE MIR -25 237 169 4 793 1111 144 40 5 chr15 27311659 27311861 -76183113 - URR1B DNA MER1_type -2 223 15 5 793 1124 69 7 7 chr15 27312002 27312148 -76182826 + B1_Mus2 SINE Alu 2 147 0 5 793 253 127 55 0 chr15 27312908 27312963 -76182011 + GA-rich Low_complexity Low_complexity 2 59 0 5 793 257 268 28 0 chr15 27313448 27313519 -76181455 - Tigger7 DNA MER2_type -26 2465 2393 5 793 907 278 32 26 chr15 27313548 27313888 -76181086 + L1MA4 LINE L1 5595 5936 -364 5 793 3036 21 0 0 chr15 27313889 27314226 -76180748 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 793 15233 11 1 0 chr15 27314226 27315879 -76179095 - IAPEz-int LTR ERVK 0 6481 4827 5 793 32033 28 10 17 chr15 27315865 27319613 -76175361 - IAPEz-int LTR ERVK -2752 3729 8 5 793 3025 24 0 0 chr15 27319613 27319950 -76175024 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 793 396 0 0 0 chr15 27319968 27320012 -76174962 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 793 508 312 184 20 chr15 27320150 27320493 -76174481 - Tigger7 DNA MER2_type -2088 403 5 5 793 402 327 0 0 chr15 27321905 27322018 -76172956 + RSINE1 SINE B4 35 147 -18 5 793 378 42 0 0 chr15 27322018 27322066 -76172908 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 793 284 264 34 11 chr15 27322412 27322500 -76172474 + PB1D9 SINE Alu 31 120 0 5 793 1167 278 84 111 chr15 27322748 27323734 -76171240 + L1M4 LINE L1 4093 5052 -1094 5 793 284 222 262 0 chr15 27323739 27323865 -76171109 + L1M4 LINE L1 4229 4387 -1759 5 793 2268 160 32 7 chr15 27323996 27324399 -76170575 - MTC LTR MaLR -8 413 1 5 793 557 252 101 22 chr15 27324399 27324532 -76170442 + RSINE1 SINE B4 22 165 0 5 793 252 59 0 0 chr15 27324735 27324769 -76170205 + (CAAT)n Simple_repeat Simple_repeat 3 36 0 5 793 343 309 0 0 chr15 27324787 27324868 -76170106 + PB1D10 SINE Alu 21 101 -16 5 793 634 257 15 0 chr15 27325000 27325136 -76169838 - ID_B1 SINE B4 -55 169 32 5 793 459 266 26 0 chr15 27325254 27325367 -76169607 - PB1D10 SINE Alu 0 117 2 5 793 969 158 56 11 chr15 27325692 27325871 -76169103 + B2_Mm2 SINE B2 5 191 -4 5 793 547 246 9 0 chr15 27325882 27325996 -76168978 + ID_B1 SINE B4 84 198 -26 5 793 227 357 39 8 chr15 27326051 27326178 -76168796 - MIRc SINE MIR -65 203 73 5 793 33189 79 18 4 chr15 27326819 27332136 -76162838 + L1Md_F2 LINE L1 191 5585 -298 5 793 7495 80 9 6 chr15 27332137 27333129 -76161845 + L1Md_F2 LINE L1 5587 6581 -1 5 793 302 254 14 0 chr15 27333232 27333303 -76161671 - ID4 SINE ID -10 73 2 5 793 354 310 27 14 chr15 27333306 27333453 -76161521 - B1F SINE Alu 0 149 1 5 793 522 0 0 0 chr15 27333485 27333543 -76161431 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 793 324 296 57 0 chr15 27333564 27333652 -76161322 - RSINE1 SINE B4 -29 136 44 5 793 212 213 79 32 chr15 27333832 27333895 -76161079 - PB1D9 SINE Alu -1 119 54 5 793 569 239 30 23 chr15 27333844 27333977 -76160997 - ID_B1 SINE B4 -11 213 80 5 793 277 305 10 31 chr15 27334535 27334633 -76160341 - MLT1A1 LTR MaLR 0 408 313 5 793 301 57 0 19 chr15 27334692 27334746 -76160228 + L1Md_F2 LINE L1 6530 6582 0 5 793 247 310 0 14 chr15 27336288 27336360 -76158614 + ID4 SINE ID 3 73 -10 5 793 199 29 27 54 chr15 27336704 27336741 -76158233 + (TAA)n Simple_repeat Simple_repeat 1 36 0 5 793 237 139 22 44 chr15 27337162 27337207 -76157767 + RLTR9E LTR ERVK 7 50 -318 5 793 475 262 74 56 chr15 27337249 27337497 -76157477 + RLTR9E LTR ERVK 117 402 -1 5 793 521 258 7 50 chr15 27337509 27337648 -76157326 + MTE2a LTR MaLR 57 189 -190 5 793 225 0 0 0 chr15 27337674 27337699 -76157275 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 793 473 308 43 49 chr15 27337726 27337890 -76157084 + RSINE1 SINE B4 3 165 0 5 793 1044 183 86 0 chr15 27338104 27338301 -76156673 + B3 SINE B2 3 216 0 5 793 1124 70 0 14 chr15 27338562 27338700 -76156274 + B1_Mus2 SINE Alu 2 139 -8 5 793 267 31 0 0 chr15 27338700 27338732 -76156242 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 793 231 219 0 72 chr15 27340024 27340093 -76154881 - MER34 LTR ERV1 -71 471 408 5 793 379 279 75 19 chr15 27340089 27340195 -76154779 - B1_Mur2 SINE Alu -11 138 27 5 793 1282 304 58 39 chr15 27340298 27340709 -76154265 + MTD LTR MaLR 1 419 0 5 793 2030 132 54 88 chr15 27341114 27341522 -76153452 - ORR1B1 LTR MaLR 0 394 1 5 793 546 57 0 0 chr15 27342388 27342458 -76152516 + (GA)n Simple_repeat Simple_repeat 2 71 0 5 793 207 0 24 73 chr15 27342861 27342902 -76152072 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 793 903 45 0 0 chr15 27344066 27344178 -76150796 + (ATGGTG)n Simple_repeat Simple_repeat 2 113 0 5 793 225 151 0 0 chr15 27344348 27344401 -76150573 + A-rich Low_complexity Low_complexity 1 53 0 5 793 1644 237 68 5 chr15 27345331 27345725 -76149249 - MTD LTR MaLR 0 419 1 5 793 290 293 90 10 chr15 27345748 27345760 -76149214 - PB1D10 SINE Alu -9 108 4 5 793 309 271 106 0 chr15 27345760 27345845 -76149129 - ID_B1 SINE B4 -46 178 85 5 793 180 111 0 0 chr15 27346073 27346100 -76148874 + (A)n Simple_repeat Simple_repeat 1 27 0 5 793 2499 147 109 14 chr15 27346599 27347041 -76147933 + RLTR20A2 LTR ERVK 1 484 -94 5 793 915 290 30 102 chr15 27347853 27348293 -76146681 - MTE2a LTR MaLR 0 379 1 5 793 189 275 0 0 chr15 27348913 27349091 -76145883 + (TG)n Simple_repeat Simple_repeat 1 178 0 5 793 207 69 0 0 chr15 27349131 27349160 -76145814 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 5 793 441 0 0 0 chr15 27349977 27350026 -76144948 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 793 379 291 46 23 chr15 27350027 27350157 -76144817 + MER103 DNA DNA 12 144 -22 5 793 313 278 97 26 chr15 27350202 27350357 -76144617 + MLT2B4 LTR ERVL 80 245 -311 5 793 336 83 0 0 chr15 27350379 27350427 -76144547 + (TCTCCC)n Simple_repeat Simple_repeat 2 49 0 5 793 399 21 0 0 chr15 27350427 27350475 -76144499 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 5 793 981 93 19 32 chr15 27350476 27350631 -76144343 - B2_Mm2 SINE B2 -41 154 2 5 793 256 293 22 28 chr15 27350631 27350752 -76144222 + MLT2B4 LTR ERVL 412 521 -41 5 793 860 308 11 21 chr15 27351110 27351389 -76143585 + B4 SINE B4 1 276 -16 5 793 3221 147 125 30 chr15 27351456 27352088 -76142886 + RLTR17 LTR ERVK 1 692 0 5 793 289 260 47 28 chr15 27352413 27352520 -76142454 + ID_B1 SINE B4 111 219 -5 5 793 21 36 0 0 chr15 27353236 27353264 -76141710 + AT_rich Low_complexity Low_complexity 1 28 0 5 793 290 289 66 60 chr15 27354164 27354198 -76140776 - B2_Mm1a SINE B2 -18 175 135 5 793 468 0 0 0 chr15 27354198 27354250 -76140724 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 793 290 289 66 60 chr15 27354250 27354381 -76140593 - B2_Mm1a SINE B2 -59 134 10 5 793 718 263 0 8 chr15 27354254 27354388 -76140586 - RSINE1 SINE B4 -30 135 3 5 793 1540 240 58 6 chr15 27354626 27354974 -76140000 - ORR1D2 LTR MaLR -4 366 1 5 793 2468 98 0 0 chr15 27355063 27355389 -76139585 + ORR1A3 LTR MaLR 1 326 0 5 793 255 272 12 24 chr15 27356054 27356137 -76138837 - ID4 SINE ID 0 83 2 5 793 469 262 36 16 chr15 27356139 27356253 -76138721 - PB1D10 SINE Alu 0 117 8 5 793 344 244 39 0 chr15 27356280 27356358 -76138616 + MTEb LTR MaLR 3 83 -276 5 793 454 237 41 33 chr15 27356549 27356671 -76138303 + MTEb LTR MaLR 257 379 0 5 793 183 80 0 0 chr15 27356831 27356856 -76138118 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 5 793 189 74 0 0 chr15 27356966 27356993 -76137981 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 5 793 529 287 36 3 chr15 27357833 27357977 -76136997 + B3A SINE B2 53 203 -13 5 793 936 229 111 108 chr15 27358058 27358436 -76136538 + MTEa LTR MaLR 1 379 0 5 793 345 203 0 0 chr15 27359055 27359119 -76135855 + PB1D7 SINE Alu 18 81 -39 5 793 385 262 47 27 chr15 27359124 27359273 -76135701 + L1M5 LINE L1 5522 5673 -451 5 793 230 233 40 27 chr15 27359648 27359723 -76135251 + MT2B2 LTR ERVL 169 244 -340 5 793 492 212 1 14 chr15 27359664 27359770 -76135204 + PB1D7 SINE Alu 31 127 -22 5 793 318 333 0 0 chr15 27359881 27359998 -76134976 - PB1D10 SINE Alu 0 117 1 5 793 636 269 101 12 chr15 27360329 27360498 -76134476 - ID_B1 SINE B4 -21 203 20 5 793 477 0 0 0 chr15 27360509 27360562 -76134412 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 793 450 192 93 83 chr15 27360577 27360685 -76134289 - PB1 SINE Alu -16 111 3 5 793 669 316 21 5 chr15 27361264 27361458 -76133516 - B3A SINE B2 0 198 2 5 793 1366 95 26 0 chr15 27361538 27361728 -76133246 + B2_Mm2 SINE B2 1 195 0 5 793 868 291 61 45 chr15 27361858 27362172 -76132802 - ORR1E LTR MaLR -29 350 6 5 793 233 192 19 19 chr15 27362197 27362250 -76132724 - L1MC LINE L1 -2133 5749 5697 5 793 654 264 69 0 chr15 27362551 27362725 -76132249 - MIR SINE MIR -69 193 8 5 793 387 0 0 0 chr15 27363261 27363304 -76131670 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 793 1225 41 0 0 chr15 27363322 27363469 -76131505 - B1_Mus1 SINE Alu 0 148 2 5 793 269 340 26 26 chr15 27363498 27363652 -76131322 - L1M5 LINE L1 -3557 2589 2436 5 793 243 0 0 0 chr15 27364526 27364553 -76130421 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 793 550 124 38 0 chr15 27364756 27364861 -76130113 + GA-rich Low_complexity Low_complexity 3 111 0 5 793 233 282 0 90 chr15 27365064 27365142 -76129832 + RSINE1 SINE B4 95 165 0 5 793 652 253 138 141 chr15 27365760 27366087 -76128887 - MTEa LTR MaLR -29 350 25 5 793 291 338 0 0 chr15 27366086 27366163 -76128811 - B1F1 SINE Alu -70 79 3 5 793 354 229 86 0 chr15 27366239 27366344 -76128630 + PB1D9 SINE Alu 1 114 -6 5 793 485 32 16 0 chr15 27366591 27366654 -76128320 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 793 2015 192 13 3 chr15 27366656 27367031 -76127943 - RLTR14 LTR ERV1 -3 379 1 6 793 621 40 0 0 chr15 27367034 27367110 -76127864 + (GGAA)n Simple_repeat Simple_repeat 2 77 0 6 793 730 270 242 22 chr15 27367117 27367344 -76127630 + B4 SINE B4 2 278 -14 6 793 387 0 0 0 chr15 27367489 27367532 -76127442 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 6 793 371 255 130 47 chr15 27367681 27367850 -76127124 - MLT1C LTR MaLR -247 220 38 6 793 204 231 0 0 chr15 27368038 27368090 -76126884 + T-rich Low_complexity Low_complexity 1 52 0 6 793 747 199 13 33 chr15 27368091 27368242 -76126732 - B1_Mur3 SINE Alu -1 148 1 6 793 3094 277 82 53 chr15 27368242 27368373 -76126601 - L1_Mur3 LINE L1 -604 5276 5132 6 793 3118 83 2 0 chr15 27368373 27368771 -76126203 - MTB LTR MaLR 0 400 2 6 793 3094 277 82 53 chr15 27368771 27370219 -76124755 - L1_Mur3 LINE L1 -749 5131 3653 6 793 2693 266 125 19 chr15 27370235 27371113 -76123861 + Lx8 LINE L1 6444 7414 -59 6 793 23 0 0 0 chr15 27371191 27371214 -76123760 + GC_rich Low_complexity Low_complexity 1 23 0 6 793 550 309 15 0 chr15 27371226 27371362 -76123612 + ID_B1 SINE B4 86 223 -1 6 793 693 311 15 133 chr15 27372502 27372840 -76122134 + MLT1A0 LTR MaLR 1 298 -67 6 793 866 234 96 0 chr15 27373291 27373479 -76121495 + B4A SINE B4 3 211 -81 6 793 585 275 84 106 chr15 27373479 27373678 -76121296 + B3A SINE B2 2 194 -4 6 793 210 288 15 0 chr15 27373698 27373739 -76121235 + RSINE1 SINE B4 99 140 -25 6 793 192 40 0 0 chr15 27373739 27373764 -76121210 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 793 210 288 15 0 chr15 27373764 27373788 -76121186 + RSINE1 SINE B4 141 164 -1 6 793 718 118 33 0 chr15 27373789 27373941 -76121033 + (CA)n Simple_repeat Simple_repeat 1 157 0 6 793 657 234 36 0 chr15 27373951 27374088 -76120886 + B1F SINE Alu 1 142 -7 6 793 235 319 43 21 chr15 27374130 27374260 -76120714 + MIRb SINE MIR 61 197 -71 6 793 186 103 0 0 chr15 27376108 27376137 -76118837 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 793 683 264 24 12 chr15 27376174 27376339 -76118635 - B4A SINE B4 -9 283 117 6 793 7469 157 75 33 chr15 27376375 27377249 -76117725 - Lx5 LINE L1 0 7050 6146 6 793 387 0 0 0 chr15 27377249 27377292 -76117682 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 793 7469 157 75 33 chr15 27377292 27377658 -76117316 - Lx5 LINE L1 -905 6145 5764 6 793 3540 25 2 0 chr15 27377658 27378053 -76116921 - MTA_Mm LTR MaLR 0 396 1 6 793 7469 103 32 15 chr15 27378053 27378332 -76116642 - Lx5 LINE L1 -1287 5763 5466 6 793 376 250 47 12 chr15 27378337 27378422 -76116552 - B4 SINE B4 -201 91 4 6 793 471 291 23 38 chr15 27378481 27378613 -76116361 + ID_B1 SINE B4 82 211 -13 6 793 407 314 57 16 chr15 27378648 27378771 -76116203 + PB1D10 SINE Alu 2 129 -20 6 793 664 172 74 0 chr15 27379233 27379355 -76115619 - B1_Mur2 SINE Alu -18 131 1 6 793 348 317 141 41 chr15 27379411 27379730 -76115244 + MLT1C LTR MaLR 113 463 -4 6 793 2304 80 9 64 chr15 27379800 27380146 -76114828 - ORR1A2 LTR MaLR 0 327 1 6 793 200 352 0 14 chr15 27380842 27380914 -76114060 + MIRm SINE MIR 13 83 -193 6 793 589 284 75 23 chr15 27380992 27381210 -76113764 + B3A SINE B2 1 216 0 6 793 23 0 0 0 chr15 27381213 27381236 -76113738 + AT_rich Low_complexity Low_complexity 1 23 0 6 793 502 200 130 8 chr15 27381252 27381383 -76113591 + B1F SINE Alu 2 148 -1 6 793 508 225 130 16 chr15 27381526 27381711 -76113263 - L1MA8 LINE L1 -24 6267 6062 6 793 260 277 103 96 chr15 27381824 27381980 -76112994 - RSINE1 SINE B4 -7 158 2 6 793 780 248 209 17 chr15 27381985 27382387 -76112587 - L1MA8 LINE L1 -228 6063 5582 6 793 210 237 12 95 chr15 27382403 27382487 -76112487 + MIRc SINE MIR 96 172 -96 6 793 309 309 82 0 chr15 27382590 27382687 -76112287 + PB1D10 SINE Alu 1 105 -12 6 793 711 233 148 0 chr15 27383125 27383314 -76111660 + ID_B1 SINE B4 2 218 -6 6 793 5291 56 0 8 chr15 27383503 27384155 -76110819 - L1Md_F2 LINE L1 -12 6570 5924 6 793 15863 58 1 7 chr15 27384156 27386146 -76108828 + L1Md_F2 LINE L1 3906 5883 0 6 793 423 252 30 13 chr15 27386178 27386291 -76108683 - B1F1 SINE Alu -8 141 15 6 793 1076 148 27 11 chr15 27386392 27386576 -76108398 + B2_Mm2 SINE B2 1 187 -8 6 793 359 271 70 14 chr15 27387996 27388138 -76106836 + MER33 DNA MER1_type 94 243 -81 6 793 277 138 0 44 chr15 27388694 27388762 -76106212 + GA-rich Low_complexity Low_complexity 2 66 0 6 793 327 297 132 52 chr15 27388918 27389092 -76105882 - MLT1A1 LTR MaLR -6 402 215 6 793 396 0 0 0 chr15 27389407 27389451 -76105523 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 793 918 24 53 53 chr15 27389452 27389477 -76105497 - B1_Mm SINE Alu -13 134 115 6 793 1568 132 36 66 chr15 27389477 27389809 -76105165 - RLTRETN_Mm LTR ERVK 0 322 1 6 793 918 24 53 53 chr15 27389809 27389916 -76105058 - B1_Mm SINE Alu -33 114 2 6 793 439 165 49 114 chr15 27389811 27389934 -76105040 - MT2B LTR ERVL -337 264 150 6 793 331 250 11 0 chr15 27391309 27391397 -76103577 - L1MC4a LINE L1 -1987 5895 5807 6 793 286 259 74 0 chr15 27392289 27392370 -76102604 + PB1D10 SINE Alu 25 111 -6 6 793 180 0 0 0 chr15 27392432 27392452 -76102522 + (T)n Simple_repeat Simple_repeat 1 20 0 6 793 689 249 75 24 chr15 27392523 27392769 -76102205 - ORR1D2 LTR MaLR 0 370 112 6 793 348 247 48 0 chr15 27392817 27392935 -76102039 - ORR1D2 LTR MaLR -245 129 1 6 793 1228 41 0 0 chr15 27392954 27393099 -76101875 + B1_Mm SINE Alu 2 146 -1 6 793 261 0 0 0 chr15 27393555 27393584 -76101390 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6 793 1116 45 0 22 chr15 27393584 27393722 -76101252 - B1_Mus2 SINE Alu -11 136 2 6 793 419 277 74 19 chr15 27393742 27393953 -76101021 - B3A SINE B2 0 216 1 6 794 189 74 0 0 chr15 27394805 27394832 -76100142 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 6 794 517 220 11 9 chr15 27394836 27394958 -76100016 - B1F1 SINE Alu -13 136 14 6 794 297 73 0 0 chr15 27395058 27395099 -76099875 + B1_Mm SINE Alu 107 147 0 6 794 883 184 40 92 chr15 27395224 27395452 -76099522 + B3 SINE B2 1 216 0 6 794 22 35 0 0 chr15 27396205 27396234 -76098740 + GC_rich Low_complexity Low_complexity 1 29 0 6 794 25 83 0 0 chr15 27396258 27396318 -76098656 + GC_rich Low_complexity Low_complexity 1 60 0 6 794 25 0 0 0 chr15 27396365 27396390 -76098584 + GC_rich Low_complexity Low_complexity 1 25 0 6 794 297 75 0 0 chr15 27396470 27396510 -76098464 + (CCG)n Simple_repeat Simple_repeat 1 40 0 6 794 231 167 0 32 chr15 27396620 27396682 -76098292 + (CCG)n Simple_repeat Simple_repeat 3 62 0 6 794 423 0 0 0 chr15 27397391 27397438 -76097536 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 794 261 0 0 0 chr15 27397438 27397466 -76097508 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 794 779 123 24 16 chr15 27398350 27398474 -76096500 + B1_Mur1 SINE Alu 24 148 -1 6 794 363 44 0 0 chr15 27398541 27398586 -76096388 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 794 218 280 76 48 chr15 27398681 27398786 -76096188 - MIRb SINE MIR -112 156 49 6 794 288 0 0 0 chr15 27398988 27399020 -76095954 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 794 441 66 0 0 chr15 27399359 27399420 -76095554 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 794 2451 153 4 77 chr15 27399606 27399850 -76095124 - MTC LTR MaLR 0 421 196 6 794 2945 56 25 39 chr15 27399850 27400256 -76094718 - L1Md_F2 LINE L1 0 6582 6183 6 794 2451 153 4 77 chr15 27400256 27400465 -76094509 - MTC LTR MaLR -226 195 1 6 794 423 284 10 10 chr15 27400610 27400713 -76094261 - PB1D10 SINE Alu -13 104 2 6 794 338 250 33 39 chr15 27400713 27400847 -76094127 - B3A SINE B2 -60 133 2 6 794 2039 113 98 3 chr15 27400967 27401294 -76093680 + ORR1B2 LTR MaLR 1 358 -9 6 794 319 250 0 13 chr15 27401942 27402019 -76092955 + ID4_ SINE ID 1 76 -7 6 794 198 103 0 0 chr15 27402035 27402064 -76092910 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 6 794 198 0 0 0 chr15 27402838 27402860 -76092114 + (TG)n Simple_repeat Simple_repeat 2 23 0 6 794 186 43 0 0 chr15 27402974 27402997 -76091977 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 794 311 337 35 55 chr15 27403053 27403254 -76091720 - Tigger15a DNA TcMar -1 714 518 6 794 270 136 0 0 chr15 27403424 27403468 -76091506 + (TCC)n Simple_repeat Simple_repeat 3 46 0 6 794 3011 288 109 23 chr15 27403778 27403816 -76091158 - Lx8 LINE L1 0 7473 7428 6 794 414 100 0 0 chr15 27403816 27403876 -76091098 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 794 3011 288 109 23 chr15 27403876 27405015 -76089959 - Lx8 LINE L1 -46 7427 6195 6 794 410 79 0 16 chr15 27405024 27405088 -76089886 + (TA)n Simple_repeat Simple_repeat 2 64 0 6 794 395 256 57 41 chr15 27405342 27405364 -76089610 + B4 SINE B4 67 190 -102 6 794 639 120 20 0 chr15 27405364 27405464 -76089510 + B1_Mur4 SINE Alu 1 102 -48 6 794 366 100 0 0 chr15 27405484 27405544 -76089430 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 794 270 266 49 114 chr15 27406286 27406409 -76088565 - PB1D10 SINE Alu -2 115 1 6 794 26 0 0 0 chr15 27406413 27406439 -76088535 + AT_rich Low_complexity Low_complexity 1 26 0 6 794 449 278 112 11 chr15 27407912 27408090 -76086884 - L1ME2 LINE L1 -8 6156 5961 6 794 471 310 139 47 chr15 27408274 27408633 -76086341 + L1MB3 LINE L1 5791 6182 -1 6 794 2275 98 3 58 chr15 27408756 27409102 -76085872 - ORR1A2 LTR MaLR 0 327 1 6 794 267 212 71 148 chr15 27409103 27409258 -76085716 + B1F2 SINE Alu 3 145 -4 6 794 294 179 0 0 chr15 27409817 27409873 -76085101 + CT-rich Low_complexity Low_complexity 3 58 0 6 794 293 299 94 17 chr15 27410189 27410347 -76084627 + MIRb SINE MIR 1 171 -105 6 794 298 246 0 0 chr15 27411079 27411144 -76083830 + PB1 SINE Alu 52 116 -11 6 794 2430 128 15 5 chr15 27411158 27411558 -76083416 + Lx2B LINE L1 6597 7000 0 6 794 1407 50 50 6 chr15 27412278 27412458 -76082516 + B2_Mm2 SINE B2 2 189 -6 7 794 515 230 95 0 chr15 27412469 27412617 -76082357 + RSINE1 SINE B4 3 164 -1 7 794 202 194 0 0 chr15 27412618 27412654 -76082320 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 794 180 0 0 0 chr15 27412688 27412708 -76082266 + (TTAA)n Simple_repeat Simple_repeat 2 21 0 7 794 230 273 0 0 chr15 27412801 27412856 -76082118 + C-rich Low_complexity Low_complexity 1 55 0 7 794 387 228 217 0 chr15 27413320 27413412 -76081562 - PB1D9 SINE Alu -8 112 1 7 794 275 255 36 81 chr15 27413474 27413585 -76081389 + PB1D10 SINE Alu 5 110 -7 7 794 807 11 0 0 chr15 27413960 27414052 -76080922 + (TG)n Simple_repeat Simple_repeat 1 92 0 7 794 279 0 0 0 chr15 27414052 27414082 -76080892 + (GA)n Simple_repeat Simple_repeat 1 31 0 7 794 760 210 106 20 chr15 27414331 27414530 -76080444 - B3 SINE B2 0 216 1 7 794 216 131 47 47 chr15 27414914 27414978 -76079996 + (TATAA)n Simple_repeat Simple_repeat 5 68 0 7 794 311 233 68 0 chr15 27415016 27415030 -76079944 - PB1 SINE Alu -47 80 3 7 794 331 203 0 0 chr15 27415030 27415089 -76079885 - ID_B1 SINE B4 -82 142 84 7 794 227 259 47 58 chr15 27416368 27416424 -76078550 - Charlie6 DNA MER1_type -1592 1908 1851 7 794 287 239 156 22 chr15 27416424 27416514 -76078460 - PB1D10 SINE Alu -15 102 1 7 794 227 259 47 58 chr15 27416514 27416543 -76078431 - Charlie6 DNA MER1_type -1650 1850 1824 7 794 206 244 0 0 chr15 27418504 27418545 -76076429 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 794 245 151 19 0 chr15 27418764 27418817 -76076157 + GA-rich Low_complexity Low_complexity 4 57 0 7 794 239 248 157 10 chr15 27419057 27419159 -76075815 - PB1D10 SINE Alu 0 117 1 7 794 498 250 28 14 chr15 27419283 27419425 -76075549 + B1_Mm SINE Alu 1 144 -3 7 794 410 254 55 0 chr15 27420816 27420926 -76074048 - B1_Mur1 SINE Alu -1 148 33 7 794 275 277 51 108 chr15 27420936 27421094 -76073880 - B1F1 SINE Alu 0 149 1 7 794 538 255 134 41 chr15 27422434 27422606 -76072368 + RMER30 DNA MER1_type 5 192 -10 7 794 314 257 0 0 chr15 27422669 27422743 -76072231 + L1MA7 LINE L1 5839 5912 -379 7 794 285 167 0 0 chr15 27422981 27423035 -76071939 + T-rich Low_complexity Low_complexity 1 54 0 7 794 241 315 14 0 chr15 27423773 27423846 -76071128 + ID2 SINE ID 4 77 -6 7 794 517 303 44 40 chr15 27424621 27424848 -76070126 + B4A SINE B4 43 270 -22 7 794 216 0 0 0 chr15 27424848 27424872 -76070102 + (CATG)n Simple_repeat Simple_repeat 3 26 0 7 794 181 371 14 0 chr15 27426810 27426880 -76068094 - MIRc SINE MIR -114 154 84 7 794 180 111 0 0 chr15 27427033 27427060 -76067914 + (TGAG)n Simple_repeat Simple_repeat 4 30 0 7 794 192 167 0 0 chr15 27427518 27427566 -76067408 + CT-rich Low_complexity Low_complexity 2 49 0 7 794 405 0 0 0 chr15 27427579 27427624 -76067350 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 794 555 82 0 0 chr15 27428182 27428267 -76066707 - L1Md_F2 LINE L1 0 6582 6498 7 794 1554 38 27 0 chr15 27428720 27428903 -76066071 - B2_Mm1a SINE B2 -5 188 1 7 794 1566 247 67 102 chr15 27429427 27430013 -76064961 + Lx8 LINE L1 6788 7352 -121 7 794 1076 270 47 0 chr15 27430444 27430722 -76064252 - B4A SINE B4 0 292 2 7 794 323 176 202 32 chr15 27430739 27430833 -76064141 - PB1D10 SINE Alu -7 110 1 7 794 549 0 0 0 chr15 27430954 27431015 -76063959 + (TAGA)n Simple_repeat Simple_repeat 3 63 0 7 794 246 32 0 0 chr15 27431017 27431048 -76063926 + (GA)n Simple_repeat Simple_repeat 1 31 0 7 794 450 224 45 56 chr15 27431429 27431595 -76063379 - B1F SINE Alu 0 147 19 7 794 279 192 50 25 chr15 27431914 27431994 -76062980 - ID4 SINE ID 0 83 2 7 794 509 306 52 15 chr15 27432528 27432664 -76062310 - RSINE1 SINE B4 -19 146 6 7 794 201 200 16 32 chr15 27432797 27432859 -76062115 + G-rich Low_complexity Low_complexity 1 61 0 7 794 216 0 0 0 chr15 27433302 27433326 -76061648 + (A)n Simple_repeat Simple_repeat 1 24 0 7 794 380 296 0 30 chr15 27433329 27433430 -76061544 + PB1D10 SINE Alu 12 109 -8 7 794 180 111 0 0 chr15 27434111 27434138 -76060836 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 794 220 360 8 83 chr15 27434320 27434441 -76060533 + B1_Mur3 SINE Alu 31 142 -7 7 794 299 294 181 8 chr15 27434443 27434570 -76060404 - B4 SINE B4 -142 150 2 7 794 631 217 51 167 chr15 27434599 27434815 -76060159 - B3 SINE B2 -6 210 20 7 794 830 228 24 10 chr15 27435068 27435278 -76059696 + B3A SINE B2 7 216 0 7 794 333 212 167 17 chr15 27436761 27436881 -76058093 - B1F1 SINE Alu -11 138 1 7 794 360 258 268 20 chr15 27437608 27437819 -76057155 + B4A SINE B4 22 283 -9 7 794 388 345 13 54 chr15 27439065 27439304 -76055670 - MER33 DNA MER1_type -86 238 10 7 794 584 305 16 136 chr15 27439817 27440060 -76054914 - B3A SINE B2 0 216 3 7 794 650 191 128 15 chr15 27441043 27441176 -76053798 + B1_Mur1 SINE Alu 2 149 0 7 794 253 158 9 86 chr15 27442370 27442452 -76052522 + B4 SINE B4 49 121 -171 7 794 461 309 42 56 chr15 27442441 27442585 -76052389 + RSINE1 SINE B4 14 155 -10 7 794 604 269 70 40 chr15 27442610 27442797 -76052177 + B4 SINE B4 81 273 -19 7 794 408 55 0 0 chr15 27442797 27442852 -76052122 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 794 604 269 70 40 chr15 27442852 27442865 -76052109 + B4 SINE B4 274 287 -5 7 794 432 0 0 0 chr15 27443335 27443383 -76051591 + (TC)n Simple_repeat Simple_repeat 1 48 0 7 794 657 0 0 0 chr15 27443640 27443713 -76051261 + (GGGAGA)n Simple_repeat Simple_repeat 3 75 0 7 794 501 241 94 29 chr15 27444388 27444559 -76050415 - B3A SINE B2 -16 182 1 7 794 2593 55 6 3 chr15 27444585 27444912 -76050062 - IAPEY_LTR LTR ERVK 0 385 58 7 794 426 298 220 49 chr15 27445367 27445758 -76049216 - MER31B LTR ERV1 -7 459 2 7 794 22 0 0 0 chr15 27446656 27446678 -76048296 + AT_rich Low_complexity Low_complexity 1 22 0 7 794 256 299 23 0 chr15 27447996 27448083 -76046891 - AmnSINE1 SINE SINE -413 162 74 7 794 474 82 35 0 chr15 27448356 27448441 -76046533 + (TG)n Simple_repeat Simple_repeat 1 88 0 7 794 543 245 152 98 chr15 27448446 27448647 -76046327 - B4 SINE B4 -1 291 85 7 794 387 0 0 0 chr15 27448647 27448690 -76046284 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 794 543 245 152 98 chr15 27448690 27448764 -76046210 - B4 SINE B4 -208 84 3 7 794 195 100 0 0 chr15 27450292 27450322 -76044652 + (TGG)n Simple_repeat Simple_repeat 1 30 0 7 794 194 290 11 11 chr15 27450826 27450888 -76044086 - L2b LINE L2 -5 3421 3331 7 794 3137 73 5 0 chr15 27451234 27451630 -76043344 - MTB LTR MaLR -2 398 1 7 794 273 197 0 90 chr15 27453050 27453128 -76041846 + PB1D10 SINE Alu 46 116 -1 7 794 255 125 0 0 chr15 27454405 27454445 -76040529 + (GGA)n Simple_repeat Simple_repeat 2 41 0 7 794 596 292 22 0 chr15 27456432 27456569 -76038405 - B1F SINE Alu 0 149 10 7 794 1116 111 72 6 chr15 27456697 27456878 -76038096 - B2_Mm2 SINE B2 -2 193 1 7 794 207 0 0 0 chr15 27456975 27456998 -76037976 + (TC)n Simple_repeat Simple_repeat 2 24 0 7 794 4366 55 24 2 chr15 27457013 27457557 -76037417 - L1_Mus3 LINE L1 -7 6631 6076 7 794 1797 184 40 48 chr15 27457802 27458179 -76036795 - ORR1D1 LTR MaLR 0 374 1 7 794 1187 76 0 0 chr15 27458272 27458417 -76036557 - B1_Mus2 SINE Alu -2 145 1 7 794 200 288 30 15 chr15 27458420 27458487 -76036487 - MIRm SINE MIR -85 191 124 7 794 703 276 66 0 chr15 27459219 27459400 -76035574 + B4A SINE B4 94 286 -6 7 794 336 301 8 11 chr15 27459459 27459549 -76035425 + B4 SINE B4 220 290 -2 7 794 516 254 0 25 chr15 27460199 27460320 -76034654 + ID_B1 SINE B4 82 199 -25 7 794 579 144 0 0 chr15 27460328 27460425 -76034549 + (CCAA)n Simple_repeat Simple_repeat 3 99 0 7 794 433 279 53 18 chr15 27460844 27460957 -76034017 - PB1D7 SINE Alu -3 117 1 7 794 697 176 72 22 chr15 27460963 27461102 -76033872 - B1F SINE Alu -3 146 1 7 794 1986 85 157 0 chr15 27461572 27461853 -76033121 - ORR1A2 LTR MaLR 0 327 3 7 794 345 205 51 0 chr15 27462242 27462320 -76032654 - PB1D7 SINE Alu 0 120 39 7 794 450 292 44 31 chr15 27462876 27463035 -76031939 + RSINE1 SINE B4 2 162 -3 7 794 374 271 0 23 chr15 27463971 27464058 -76030916 + B4A SINE B4 208 292 0 7 794 236 247 24 47 chr15 27464439 27464524 -76030450 + RMER17D LTR ERVK 240 322 -567 7 794 417 39 0 0 chr15 27464524 27464575 -76030399 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 794 285 278 56 0 chr15 27464580 27464652 -76030322 - B4A SINE B4 0 292 217 7 794 524 217 45 14 chr15 27464802 27464963 -76030011 - B3 SINE B2 -23 172 3 7 794 1121 231 92 34 chr15 27465064 27465391 -76029583 - Lx8 LINE L1 -326 7147 6802 7 794 392 315 18 12 chr15 27465408 27465575 -76029399 - Lx8 LINE L1 -715 6758 6591 7 794 569 303 24 0 chr15 27465611 27465776 -76029198 - B4A SINE B4 -122 170 2 7 794 496 77 26 0 chr15 27466364 27466442 -76028532 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 7 794 478 234 96 0 chr15 27466442 27466536 -76028438 - B1_Mur1 SINE Alu -11 138 36 7 794 319 260 13 0 chr15 27467505 27467582 -76027392 - ID4_ SINE ID -4 79 2 7 794 193 292 77 0 chr15 27469769 27469834 -76025140 + L2 LINE L2 2247 2316 -1103 7 794 195 290 43 0 chr15 27471104 27471173 -76023801 - MIRb SINE MIR -174 94 23 7 794 630 300 19 0 chr15 27471515 27471675 -76023299 + RSINE1 SINE B4 3 165 0 8 794 233 281 97 0 chr15 27471894 27472008 -76022966 - LTR16A1 LTR ERVL -87 369 245 8 794 267 31 0 0 chr15 27472287 27472319 -76022655 + (A)n Simple_repeat Simple_repeat 1 32 0 8 794 372 271 37 42 chr15 27473202 27473391 -76021583 + L1MC1 LINE L1 6146 6333 0 8 794 350 176 216 0 chr15 27473632 27473706 -76021268 - B1F SINE Alu -59 90 1 8 794 234 288 112 0 chr15 27473636 27473716 -76021258 - MT2B2 LTR ERVL -343 241 153 8 794 381 350 138 6 chr15 27475517 27475698 -76019276 - ID_B1 SINE B4 -2 222 18 8 794 483 60 0 0 chr15 27476633 27476700 -76018274 + (TG)n Simple_repeat Simple_repeat 1 67 0 8 794 510 17 0 0 chr15 27476700 27476758 -76018216 + (GA)n Simple_repeat Simple_repeat 1 59 0 8 794 650 254 124 5 chr15 27478716 27478910 -76016064 + ID_B1 SINE B4 7 223 -1 8 794 373 386 70 12 chr15 27479188 27479432 -76015542 - MLT1H LTR MaLR -281 268 11 8 794 1225 309 48 48 chr15 27481156 27481611 -76013363 - MLT1C LTR MaLR 0 467 13 8 794 852 265 87 12 chr15 27483716 27484048 -76010926 - L1MB3 LINE L1 -178 6005 5649 8 794 198 0 0 0 chr15 27484048 27484070 -76010904 + (TA)n Simple_repeat Simple_repeat 2 23 0 8 794 28 0 0 0 chr15 27484071 27484099 -76010875 + AT_rich Low_complexity Low_complexity 1 28 0 8 794 794 107 27 7 chr15 27485206 27485356 -76009618 + (TCTA)n Simple_repeat Simple_repeat 2 154 0 8 794 378 42 0 0 chr15 27485375 27485423 -76009551 + (CCTA)n Simple_repeat Simple_repeat 3 50 0 8 794 246 105 0 0 chr15 27485424 27485462 -76009512 + (TCCA)n Simple_repeat Simple_repeat 4 41 0 8 794 241 159 32 0 chr15 27485494 27485557 -76009417 + (TCTA)n Simple_repeat Simple_repeat 3 67 0 8 794 1509 254 59 34 chr15 27485927 27486334 -76008640 - MTD LTR MaLR 0 419 3 8 794 973 268 36 7 chr15 27487285 27487563 -76007411 + B4A SINE B4 1 286 -6 8 794 468 91 0 0 chr15 27487571 27487637 -76007337 + (CA)n Simple_repeat Simple_repeat 1 66 0 8 794 2618 132 24 19 chr15 27487759 27488176 -76006798 - MTC LTR MaLR 0 421 3 8 794 1425 271 73 42 chr15 27489310 27489814 -76005160 - RMER5 LTR ERV1 0 534 15 8 794 214 233 0 0 chr15 27490337 27490380 -76004594 + L2 LINE L2 1485 1527 -1892 8 794 480 18 0 0 chr15 27490782 27490839 -76004135 + (TC)n Simple_repeat Simple_repeat 1 57 0 8 794 3614 53 7 4 chr15 27492693 27493149 -76001825 - L1Md_F2 LINE L1 -4 6578 6122 8 794 495 171 16 25 chr15 27493662 27493907 -76001067 + (TCTCTG)n Simple_repeat Simple_repeat 1 242 0 8 794 222 223 41 24 chr15 27494941 27495016 -75999958 - MIR3 SINE MIR -93 183 104 8 794 1732 26 0 0 chr15 27495019 27495212 -75999762 + B2_Mm1t SINE B2 1 193 0 8 794 309 51 0 0 chr15 27496270 27496309 -75998665 + (CACGC)n Simple_repeat Simple_repeat 4 42 0 8 794 410 254 92 0 chr15 27496797 27496927 -75998047 + B4A SINE B4 151 292 0 8 794 432 241 83 0 chr15 27497780 27497888 -75997086 - B3 SINE B2 -2 214 98 8 794 2600 172 58 16 chr15 27498350 27498835 -75996139 - RLTR16 LTR ERVK 0 505 1 8 794 321 26 0 0 chr15 27500091 27500129 -75994845 + (T)n Simple_repeat Simple_repeat 1 38 0 1 794 412 311 44 11 chr15 27501670 27501823 -75993151 - B4A SINE B4 -47 245 91 2 794 229 270 62 31 chr15 27501845 27501910 -75993064 - ID4_ SINE ID -13 70 4 3 794 263 191 16 0 chr15 27502174 27502237 -75992737 + CT-rich Low_complexity Low_complexity 1 64 0 4 794 608 171 18 18 chr15 27502237 27502350 -75992624 - B1_Mur1 SINE Alu -6 143 31 5 794 363 326 132 0 chr15 27506070 27506260 -75988714 + B4A SINE B4 73 287 -5 6 794 474 236 211 0 chr15 27506473 27506634 -75988340 + MLT1C LTR MaLR 1 195 -272 7 794 248 221 71 29 chr15 27507907 27507972 -75987002 + B1_Mur2 SINE Alu 45 112 -37 8 794 584 250 118 16 chr15 27507972 27508184 -75986790 + ID_B1 SINE B4 2 228 -64 9 794 293 277 203 23 chr15 27508638 27508771 -75986203 - MLT1D LTR MaLR -348 157 1 1 794 931 253 86 0 chr15 27508806 27509027 -75985947 + Tigger7 DNA MER2_type 1 240 -2251 1 794 829 271 97 56 chr15 27509032 27509372 -75985602 + MTEa LTR MaLR 7 360 -19 1 794 847 248 112 11 chr15 27509479 27509748 -75985226 + Tigger7 DNA MER2_type 2136 2431 -60 1 794 276 30 0 0 chr15 27509899 27509932 -75985042 + (CCCCCA)n Simple_repeat Simple_repeat 3 35 0 1 794 324 0 0 0 chr15 27512159 27512195 -75982779 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 794 1074 236 14 0 chr15 27512300 27512512 -75982462 - B3 SINE B2 -1 215 1 1 794 314 317 40 33 chr15 27512540 27512690 -75982284 - B4 SINE B4 -141 151 1 1 794 870 156 0 39 chr15 27514933 27515086 -75979888 - B1_Mur3 SINE Alu -2 147 1 1 794 643 262 80 25 chr15 27515548 27515822 -75979152 - L1MD3 LINE L1 -947 7048 6760 1 794 1000 260 83 9 chr15 27518142 27518468 -75976506 + MTE2b LTR MaLR 1 350 -29 1 794 325 303 180 60 chr15 27518932 27519199 -75975775 - HAL1 LINE L1 -1457 1050 752 2 794 309 304 43 43 chr15 27519530 27519647 -75975327 - HAL1 LINE L1 -2274 233 117 2 795 845 161 15 0 chr15 27526123 27526260 -75968714 - B1_Mur2 SINE Alu -9 140 2 2 795 254 316 13 26 chr15 27527307 27527385 -75967589 - B3A SINE B2 -120 78 2 2 795 307 301 75 37 chr15 27529907 27530014 -75964960 - PB1D10 SINE Alu -2 115 5 2 795 1324 73 20 64 chr15 27530622 27530826 -75964148 - B2_Mm2 SINE B2 0 195 1 2 795 184 250 13 105 chr15 27531126 27531202 -75963772 - MIR SINE MIR -148 114 46 2 795 528 16 0 0 chr15 27531791 27531852 -75963122 + (GGGGA)n Simple_repeat Simple_repeat 1 61 0 2 795 575 199 65 20 chr15 27533096 27533291 -75961683 + MTE2b LTR MaLR 129 376 -3 2 795 210 279 16 47 chr15 27533847 27533870 -75961104 + B4A SINE B4 66 86 -206 2 795 265 321 12 47 chr15 27533870 27533955 -75961019 + PB1D9 SINE Alu 2 83 -37 2 795 361 262 87 39 chr15 27536377 27536604 -75958370 + L1MB8 LINE L1 5237 5486 -697 3 795 646 312 104 12 chr15 27536779 27536816 -75958158 + L1MB8 LINE L1 5541 5577 -601 3 795 278 253 38 0 chr15 27536816 27536895 -75958079 - ID4 SINE ID 0 83 2 3 795 646 312 104 12 chr15 27536895 27537278 -75957696 + L1MB8 LINE L1 5578 6000 -178 3 795 402 305 339 9 chr15 27537949 27538286 -75956688 + MLT1F1 LTR MaLR 12 459 -89 3 795 705 24 0 0 chr15 27539718 27539801 -75955173 + (GA)n Simple_repeat Simple_repeat 2 84 0 3 795 457 264 130 17 chr15 27540253 27540430 -75954544 + B3A SINE B2 2 198 0 3 795 25 0 0 0 chr15 27540484 27540509 -75954465 + AT_rich Low_complexity Low_complexity 1 25 0 3 795 430 349 17 0 chr15 27540651 27540823 -75954151 + (TG)n Simple_repeat Simple_repeat 2 176 0 3 795 509 289 112 24 chr15 27540906 27541076 -75953898 - B4A SINE B4 -106 186 2 3 795 615 84 0 0 chr15 27542179 27542274 -75952700 + (CA)n Simple_repeat Simple_repeat 2 96 0 3 795 519 60 0 0 chr15 27542275 27542342 -75952632 + (GGAA)n Simple_repeat Simple_repeat 2 68 0 3 795 372 280 36 54 chr15 27543083 27543249 -75951725 + RSINE1 SINE B4 3 165 0 4 795 719 167 0 11 chr15 27543249 27543431 -75951543 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 795 408 238 59 15 chr15 27543587 27543697 -75951277 + B1_Mur3 SINE Alu 41 149 0 4 795 200 194 0 0 chr15 27544405 27544441 -75950533 + C-rich Low_complexity Low_complexity 6 41 0 4 795 244 350 20 10 chr15 27544784 27544885 -75950089 - PB1D10 SINE Alu -11 106 5 4 795 22 0 0 0 chr15 27545022 27545044 -75949930 + AT_rich Low_complexity Low_complexity 1 22 0 4 795 442 211 0 0 chr15 27545376 27545452 -75949522 + PB1D7 SINE Alu 17 92 -28 4 795 1152 146 136 0 chr15 27546429 27546628 -75948346 - URR1A DNA MER1_type 0 226 1 4 795 453 19 0 0 chr15 27547286 27547340 -75947634 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 795 679 205 6 71 chr15 27547424 27547452 -75947522 + ID_B1 SINE B4 67 223 -1 4 795 1098 64 0 0 chr15 27547452 27547592 -75947382 + B1_Mus1 SINE Alu 8 147 -1 5 795 1029 186 26 11 chr15 27548342 27548532 -75946442 + B3 SINE B2 24 216 0 5 795 239 308 55 48 chr15 27549002 27549173 -75945801 + MIRb SINE MIR 2 166 -102 5 795 444 37 0 0 chr15 27550044 27550098 -75944876 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 795 192 333 41 20 chr15 27550346 27550444 -75944530 - MIRm SINE MIR 0 276 177 5 795 312 91 0 0 chr15 27551372 27551416 -75943558 + (TAA)n Simple_repeat Simple_repeat 2 45 0 5 795 1002 75 30 0 chr15 27551955 27552089 -75942885 + B1_Mur4 SINE Alu 1 138 -12 5 795 861 103 0 0 chr15 27552089 27552215 -75942759 + (GAAA)n Simple_repeat Simple_repeat 1 126 0 5 795 484 216 31 0 chr15 27554282 27554379 -75940595 + PB1D10 SINE Alu 4 103 -14 5 795 396 40 0 0 chr15 27556518 27556568 -75938406 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 795 301 281 36 24 chr15 27556586 27556670 -75938304 - B1F SINE Alu -64 85 1 6 795 708 241 69 25 chr15 27556887 27557091 -75937883 - B3 SINE B2 -2 214 2 6 795 297 51 0 0 chr15 27559747 27559786 -75935188 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 795 22 56 0 0 chr15 27560168 27560204 -75934770 + GC_rich Low_complexity Low_complexity 1 36 0 6 795 27 49 0 0 chr15 27560265 27560306 -75934668 + GC_rich Low_complexity Low_complexity 1 41 0 6 795 365 331 16 8 chr15 27561262 27561384 -75933590 + RMER5 LTR ERV1 40 162 -372 6 795 183 100 0 0 chr15 27561538 27561568 -75933406 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 6 795 464 212 16 89 chr15 27561580 27561704 -75933270 + RMER5 LTR ERV1 412 526 -8 6 795 1057 95 0 0 chr15 27561774 27561911 -75933063 + B1_Mus2 SINE Alu 2 138 -9 6 795 266 0 0 29 chr15 27561911 27561946 -75933028 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 795 396 0 0 0 chr15 27561951 27561995 -75932979 + (GAAA)n Simple_repeat Simple_repeat 4 47 0 7 795 800 306 95 31 chr15 27562209 27562567 -75932407 + MLT1C LTR MaLR 87 467 0 7 795 396 0 0 0 chr15 27562961 27563005 -75931969 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 795 511 234 74 20 chr15 27563281 27563429 -75931545 - MTE2a LTR MaLR -44 335 180 7 795 815 59 0 0 chr15 27563425 27563526 -75931448 + B1_Mus1 SINE Alu 38 138 -10 7 795 318 26 0 0 chr15 27563526 27563565 -75931409 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 7 795 414 263 10 158 chr15 27563587 27563790 -75931184 - MTE2a LTR MaLR -188 191 19 7 795 858 263 23 14 chr15 27564206 27564422 -75930552 + ERVL-B4-int LTR ERVL 3064 3281 -2433 7 795 269 290 59 20 chr15 27564513 27564615 -75930359 + L1MC3 LINE L1 7325 7430 -355 7 795 960 205 19 33 chr15 27564634 27564846 -75930128 + B3 SINE B2 8 216 0 7 795 529 304 119 8 chr15 27564850 27565118 -75929856 + L1MC3 LINE L1 7419 7716 -69 7 795 201 39 0 0 chr15 27565199 27565225 -75929749 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 7 795 990 44 88 7 chr15 27565236 27565372 -75929602 - B1_Mus2 SINE Alu 0 147 1 8 795 215 308 82 71 chr15 27565388 27565448 -75929526 - B2_Mm2 SINE B2 -9 186 3 8 795 279 287 139 57 chr15 27565448 27565570 -75929404 - RSINE1 SINE B4 -30 135 4 8 795 1183 49 7 0 chr15 27565772 27565914 -75929060 + B1_Mus2 SINE Alu 2 144 -3 8 795 182 62 31 0 chr15 27565914 27565946 -75929028 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 8 795 228 196 57 38 chr15 27565989 27566042 -75928932 - PB1D10 SINE Alu 0 117 64 8 795 538 263 37 15 chr15 27565997 27566132 -75928842 - ID_B1 SINE B4 -6 218 81 8 795 283 183 62 31 chr15 27566139 27566235 -75928739 + Charlie7 DNA MER1_type 2421 2519 -93 8 795 1070 90 0 6 chr15 27566692 27566849 -75928125 + (GAA)n Simple_repeat Simple_repeat 2 157 0 8 795 633 310 13 0 chr15 27567003 27567158 -75927816 + RSINE1 SINE B4 1 157 -8 8 795 304 268 102 60 chr15 27567013 27567180 -75927794 + B2_Mm1t SINE B2 10 183 -10 9 795 3944 65 21 3 chr15 27567867 27568395 -75926579 + L1Md_T LINE L1 5072 5585 -298 9 795 9142 7 0 0 chr15 27568396 27569410 -75925564 + L1Md_T LINE L1 5587 6582 0 9 795 7126 39 1 1 chr15 27569410 27570261 -75924713 + L1Md_F2 LINE L1 5739 6582 0 9 795 1176 62 0 0 chr15 27570612 27570758 -75924216 - B1_Mm SINE Alu 0 147 2 9 795 433 332 78 71 chr15 27570825 27571120 -75923854 + MLT1A LTR MaLR 1 297 -77 9 795 186 43 0 0 chr15 27571564 27571587 -75923387 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 795 280 317 75 150 chr15 27571696 27571963 -75923011 + Charlie2b DNA MER1_type 423 669 -2113 9 795 234 0 0 0 chr15 27572069 27572095 -75922879 + (T)n Simple_repeat Simple_repeat 1 26 0 9 795 465 198 60 60 chr15 27572285 27572337 -75922637 - B4A SINE B4 -71 221 173 9 795 2027 158 88 0 chr15 27572337 27572679 -75922295 + ORR1D1 LTR MaLR 1 372 -2 9 795 465 198 60 60 chr15 27572679 27572760 -75922214 - B4A SINE B4 -120 172 88 9 795 1013 208 10 15 chr15 27572786 27572986 -75921988 - B3 SINE B2 -17 199 1 1 795 466 250 10 0 chr15 27572986 27573081 -75921893 - B4A SINE B4 -196 96 1 9 795 417 295 199 47 chr15 27573087 27573474 -75921500 + Charlie2b DNA MER1_type 1928 2373 -409 9 795 287 330 20 0 chr15 27573678 27573778 -75921196 - RMER5 LTR ERV1 -52 482 381 1 795 853 260 38 96 chr15 27573794 27574087 -75920887 + B4 SINE B4 6 281 -11 1 795 678 283 114 8 chr15 27574118 27574364 -75920610 - RMER5 LTR ERV1 -215 319 48 1 795 419 174 204 0 chr15 27574532 27574630 -75920344 + PB1D9 SINE Alu 1 118 -2 1 795 204 111 0 0 chr15 27574684 27574720 -75920254 + (TC)n Simple_repeat Simple_repeat 2 37 0 1 795 2334 142 39 18 chr15 27575064 27575450 -75919524 + MTB_Mm LTR MaLR 1 394 -13 1 795 246 248 49 107 chr15 27575579 27575701 -75919273 + MTEb LTR MaLR 144 258 -121 1 795 4384 169 29 84 chr15 27575713 27576667 -75918307 - RMER19B LTR ERVK 0 902 1 1 795 1389 63 23 0 chr15 27576938 27577113 -75917861 + B2_Mm2 SINE B2 1 179 -16 1 795 184 353 15 0 chr15 27577379 27577447 -75917527 - MIRc SINE MIR 0 268 200 1 795 305 43 0 42 chr15 27577677 27577725 -75917249 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 1 795 722 270 176 12 chr15 27578043 27578298 -75916676 - MTE2b LTR MaLR -74 305 9 1 795 29 22 0 21 chr15 27578498 27578532 -75916442 + AT_rich Low_complexity Low_complexity 1 34 0 1 795 1032 88 7 0 chr15 27578532 27578668 -75916306 - B1_Mus2 SINE Alu -6 141 5 1 795 29 22 0 21 chr15 27578668 27578680 -75916294 + AT_rich Low_complexity Low_complexity 1 12 0 1 795 5089 218 34 40 chr15 27579251 27581605 -75913369 - Lx5 LINE L1 -26 7434 4880 1 795 1836 144 3 7 chr15 27581647 27581934 -75913040 + Lx4A LINE L1 6772 7057 -1 1 795 315 0 0 0 chr15 27582093 27582128 -75912846 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 795 988 329 10 30 chr15 27582338 27582356 -75912618 - B4A SINE B4 -2 290 273 1 795 380 82 16 0 chr15 27582356 27582417 -75912557 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 795 988 329 10 30 chr15 27582417 27582693 -75912281 - B4A SINE B4 -20 272 2 1 795 568 235 56 25 chr15 27582787 27583066 -75911908 + L1MB7 LINE L1 5180 5463 -711 1 795 1487 243 50 35 chr15 27583085 27583565 -75911409 - RMER19A LTR ERVK -51 560 107 1 795 337 150 0 0 chr15 27583601 27583661 -75911313 - MurERV4_19-int LTR ERVK 0 5780 5721 1 795 904 283 30 94 chr15 27583705 27583737 -75911237 - MTE2a LTR MaLR 0 379 350 1 795 276 30 0 0 chr15 27583737 27583770 -75911204 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 1 795 904 286 36 96 chr15 27583770 27584170 -75910804 - MTE2a LTR MaLR -30 389 4 1 795 748 327 105 29 chr15 27584173 27584762 -75910212 + L1MB7 LINE L1 5502 6135 -49 1 795 22 0 0 0 chr15 27584824 27584846 -75910128 + AT_rich Low_complexity Low_complexity 1 22 0 1 795 821 136 156 0 chr15 27585614 27585768 -75909206 - URR1A DNA MER1_type -46 180 3 1 795 203 279 16 0 chr15 27586150 27586211 -75908763 + (CATATA)n Simple_repeat Simple_repeat 1 62 0 1 795 453 195 203 39 chr15 27587045 27587173 -75907801 + B1F SINE Alu 1 149 0 1 795 304 279 155 14 chr15 27587173 27587307 -75907667 + HAL1-3A_ME LINE L1 2285 2438 -420 1 795 261 276 0 0 chr15 27587307 27587365 -75907609 + G-rich Low_complexity Low_complexity 1 58 0 1 795 907 307 30 78 chr15 27588522 27588904 -75906070 + MLT1A0 LTR MaLR 6 390 0 1 795 24 32 0 0 chr15 27588911 27588942 -75906032 + AT_rich Low_complexity Low_complexity 1 31 0 1 795 681 198 185 11 chr15 27590596 27590780 -75904194 + B3 SINE B2 1 216 0 1 795 916 294 68 23 chr15 27590805 27591033 -75903941 + L1ME1 LINE L1 5186 5440 -739 1 795 536 238 6 59 chr15 27591033 27591203 -75903771 + RSINE1 SINE B4 3 163 -2 1 795 916 330 77 56 chr15 27591203 27591808 -75903166 + L1ME1 LINE L1 5441 6036 -143 1 795 190 129 65 0 chr15 27592268 27592299 -75902675 - L2c LINE L2 -25 3362 3330 1 795 348 24 0 0 chr15 27592470 27592511 -75902463 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 795 426 286 168 29 chr15 27592531 27592668 -75902306 - B3A SINE B2 -38 160 5 1 795 210 191 0 0 chr15 27592711 27592753 -75902221 + (CAT)n Simple_repeat Simple_repeat 3 44 0 1 795 934 64 0 63 chr15 27592756 27593025 -75901949 + (TG)n Simple_repeat Simple_repeat 1 251 0 1 795 1158 249 153 20 chr15 27593592 27593945 -75901029 + MTD LTR MaLR 20 419 0 1 795 531 322 128 17 chr15 27594722 27594747 -75900227 - B4 SINE B4 -2 290 267 1 795 333 47 0 0 chr15 27594747 27594790 -75900184 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 795 531 322 128 17 chr15 27594790 27594944 -75900030 - B4 SINE B4 -26 266 92 1 795 219 185 35 69 chr15 27595949 27596007 -75898967 + B3 SINE B2 1 56 -160 1 795 414 240 183 39 chr15 27597197 27597405 -75897569 - L1MA5A LINE L1 -277 6020 5783 1 795 247 366 34 43 chr15 27598044 27598161 -75896813 - MIR SINE MIR -100 162 47 1 795 560 318 60 77 chr15 27598306 27598474 -75896500 + B4A SINE B4 17 193 -99 1 795 203 256 0 0 chr15 27598549 27598592 -75896382 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 795 924 128 8 0 chr15 27598779 27598912 -75896062 + B1_Mus1 SINE Alu 2 135 -13 1 795 216 0 0 0 chr15 27598997 27599021 -75895953 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1 795 699 171 0 0 chr15 27599406 27599535 -75895439 + CT-rich Low_complexity Low_complexity 3 131 0 1 795 245 260 25 25 chr15 27600090 27600169 -75894805 - ID4_ SINE ID -3 80 2 1 795 1311 151 4 55 chr15 27601105 27601343 -75893631 + URR1A DNA MER1_type 1 226 0 1 795 244 289 110 34 chr15 27602840 27602958 -75892016 + MER5A1 DNA MER1_type 32 158 -8 1 795 1800 171 64 20 chr15 27603384 27603777 -75891197 + RMER17C LTR ERVK 1 410 0 1 795 306 357 10 0 chr15 27603777 27603875 -75891099 + MER81 DNA AcHobo 10 108 -6 1 795 269 324 167 20 chr15 27603886 27604239 -75890735 + L2b LINE L2 2975 3381 -6 1 795 408 271 144 0 chr15 27604470 27604588 -75890386 + ID_B1 SINE B4 82 216 -8 1 795 393 22 0 0 chr15 27604589 27604635 -75890339 + (GA)n Simple_repeat Simple_repeat 2 47 0 1 795 207 100 0 0 chr15 27606476 27606506 -75888468 + (GGA)n Simple_repeat Simple_repeat 2 31 0 1 795 476 211 230 65 chr15 27606507 27606755 -75888219 - B4A SINE B4 -2 290 2 1 795 607 172 10 0 chr15 27607235 27607334 -75887640 - B1_Mur2 SINE Alu -48 101 2 1 795 229 196 0 0 chr15 27608197 27608248 -75886726 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 1 795 344 89 48 19 chr15 27609753 27609856 -75885118 + T-rich Low_complexity Low_complexity 1 106 0 1 795 568 226 6 6 chr15 27611962 27612118 -75882856 + GA-rich Low_complexity Low_complexity 3 158 0 1 795 1252 68 11 0 chr15 27612120 27612296 -75882678 + (GAA)n Simple_repeat Simple_repeat 3 180 0 1 795 241 284 85 48 chr15 27613224 27613393 -75881581 + MIRm SINE MIR 7 195 -81 1 795 189 94 0 0 chr15 27613522 27613554 -75881420 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1 795 538 42 0 0 chr15 27613562 27613633 -75881341 - B1_Mur4 SINE Alu -5 145 75 1 795 597 110 0 0 chr15 27614002 27614093 -75880881 + (GA)n Simple_repeat Simple_repeat 2 92 0 1 795 386 244 209 22 chr15 27615170 27615304 -75879670 + RSINE1 SINE B4 3 161 -4 1 795 766 160 46 0 chr15 27615425 27615556 -75879418 + B1_Mur1 SINE Alu 13 149 0 1 795 896 262 116 18 chr15 27615559 27616038 -75878936 - L1MB3 LINE L1 -83 6100 5563 1 795 219 140 0 0 chr15 27616234 27616284 -75878690 + (CAT)n Simple_repeat Simple_repeat 3 52 0 1 795 252 250 47 0 chr15 27616285 27616349 -75878625 - ID2 SINE ID -8 75 9 1 795 252 303 91 0 chr15 27616357 27616456 -75878518 - L1MB3 LINE L1 -685 5498 5391 1 795 180 0 0 0 chr15 27616461 27616481 -75878493 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 795 190 298 76 28 chr15 27616777 27616922 -75878052 - MIR SINE MIR -60 202 51 1 795 279 0 0 0 chr15 27617497 27617528 -75877446 + (A)n Simple_repeat Simple_repeat 1 31 0 1 795 625 103 44 13 chr15 27618540 27618698 -75876276 + (TAGA)n Simple_repeat Simple_repeat 3 165 0 1 795 338 129 43 11 chr15 27618832 27618926 -75876048 + (TTAA)n Simple_repeat Simple_repeat 1 97 0 1 795 992 289 42 19 chr15 27619020 27619327 -75875647 + MLT1A0 LTR MaLR 52 365 0 1 795 654 13 0 0 chr15 27619801 27619876 -75875098 + (TG)n Simple_repeat Simple_repeat 1 75 0 1 795 3127 51 61 0 chr15 27620066 27620478 -75874496 + Lx3_Mus LINE L1 6573 7009 0 1 795 580 299 30 6 chr15 27620752 27620920 -75874054 - MER58B DNA MER1_type -16 325 154 1 795 180 372 45 37 chr15 27620926 27621060 -75873914 + L2a LINE L2 3290 3424 -2 1 795 526 342 61 101 chr15 27621663 27622008 -75872966 + ORR1E LTR MaLR 1 331 -28 1 795 259 256 146 0 chr15 27622164 27622289 -75872685 - MIRb SINE MIR -10 252 110 1 795 522 264 27 124 chr15 27622521 27622707 -75872267 - B3A SINE B2 0 198 31 1 795 226 274 251 18 chr15 27623396 27623671 -75871303 + HAL1 LINE L1 2006 2344 -163 1 795 605 278 53 47 chr15 27623708 27623878 -75871096 + 7SLRNA srpRNA srpRNA 46 216 -98 1 795 3173 45 3 0 chr15 27623958 27624339 -75870635 + L1Md_F2 LINE L1 6199 6580 -2 1 795 297 0 0 0 chr15 27624415 27624448 -75870526 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 795 4651 115 47 10 chr15 27625181 27625585 -75869389 - RMER6A LTR ERVK 0 756 335 1 795 993 17 0 0 chr15 27625585 27625700 -75869274 + (TCTCCC)n Simple_repeat Simple_repeat 5 119 0 1 795 4651 115 47 10 chr15 27625700 27626024 -75868950 - RMER6A LTR ERVK -422 334 1 1 795 365 393 21 0 chr15 27626055 27626200 -75868774 - MLT1K LTR MaLR -6 589 442 1 795 682 249 93 0 chr15 27626859 27627052 -75867922 + B3 SINE B2 1 211 -5 1 795 477 260 73 22 chr15 27627602 27627756 -75867218 + MLT1A1 LTR MaLR 201 404 -4 1 795 934 281 25 53 chr15 27628032 27628190 -75866784 + MLT1A0 LTR MaLR 21 165 -200 1 795 357 24 0 0 chr15 27628190 27628232 -75866742 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 1 795 934 281 25 53 chr15 27628232 27628393 -75866581 + MLT1A0 LTR MaLR 166 331 -34 1 795 406 271 10 10 chr15 27628429 27628526 -75866448 + B3A SINE B2 53 149 -49 2 795 429 20 0 0 chr15 27628538 27628588 -75866386 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 795 378 0 0 0 chr15 27628588 27628629 -75866345 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 795 513 0 0 0 chr15 27628629 27628685 -75866289 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 795 193 340 31 21 chr15 27629296 27629392 -75865582 + MIRb SINE MIR 48 144 -124 2 795 3368 112 47 54 chr15 27629722 27630447 -75864527 + RLTR13D4 LTR ERVK 1 870 -163 2 795 1256 40 0 0 chr15 27630447 27630595 -75864379 - B1_Mus1 SINE Alu 0 148 1 2 795 3154 182 32 145 chr15 27630595 27630780 -75864194 + RLTR13D4 LTR ERVK 647 808 0 2 795 425 309 35 35 chr15 27630780 27630924 -75864050 + B4A SINE B4 8 151 -141 2 795 235 222 25 0 chr15 27631048 27631129 -75863845 + CT-rich Low_complexity Low_complexity 3 85 0 2 795 311 223 18 18 chr15 27632912 27633026 -75861948 + CT-rich Low_complexity Low_complexity 3 116 0 2 795 458 227 158 8 chr15 27633090 27633211 -75861763 - MLT1A0 LTR MaLR -17 391 235 2 795 1300 217 100 16 chr15 27633579 27633888 -75861086 + MTE2a LTR MaLR 26 360 -19 2 795 393 200 14 0 chr15 27633929 27633999 -75860975 - LTR40b LTR ERVL -22 440 370 2 795 472 256 199 60 chr15 27634170 27634336 -75860638 - B3 SINE B2 -25 191 3 2 795 499 228 12 54 chr15 27634690 27634857 -75860117 + L1MA4 LINE L1 5768 5927 -373 2 795 309 243 164 41 chr15 27634967 27635113 -75859861 + RSINE1 SINE B4 2 165 0 2 795 841 99 0 35 chr15 27635118 27635347 -75859627 + (CA)n Simple_repeat Simple_repeat 1 220 0 2 795 254 354 130 62 chr15 27635488 27635795 -75859179 + MER54B LTR ERVL 25 352 -441 2 795 281 269 13 0 chr15 27635764 27635842 -75859132 + MER54B LTR ERVL 715 793 0 2 795 30 0 0 0 chr15 27636908 27636938 -75858036 + AT_rich Low_complexity Low_complexity 1 30 0 2 795 428 224 24 0 chr15 27636942 27637027 -75857947 - B1_Mur4 SINE Alu -56 94 8 2 795 296 221 67 24 chr15 27637142 27637234 -75857740 - MTE2b LTR MaLR -41 338 243 2 795 252 284 10 31 chr15 27637236 27637334 -75857640 + GA-rich Low_complexity Low_complexity 1 96 0 2 795 316 324 75 14 chr15 27638474 27638621 -75856353 - MLT1K LTR MaLR -57 538 383 2 795 841 288 36 24 chr15 27639767 27640016 -75854958 + B4A SINE B4 1 252 -40 2 795 221 347 21 10 chr15 27640172 27640194 -75854780 - ID_B1 SINE B4 -126 98 2 2 795 252 324 14 0 chr15 27640194 27640268 -75854706 - ID4 SINE ID -7 76 2 2 795 425 250 0 80 chr15 27641127 27641240 -75853734 - MER5A1 DNA MER1_type -2 164 61 2 795 653 297 56 41 chr15 27641269 27641539 -75853435 + B4 SINE B4 1 274 -18 2 795 324 0 0 0 chr15 27642193 27642229 -75852745 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 795 305 262 110 12 chr15 27642238 27642401 -75852573 - L1M5 LINE L1 -1540 4606 4435 2 795 7889 63 6 2 chr15 27642984 27643972 -75851002 + L1Md_F2 LINE L1 5587 6578 -4 2 795 2376 267 128 35 chr15 27644181 27644509 -75850465 + Lx8 LINE L1 6472 6798 -675 2 795 698 132 198 0 chr15 27644509 27644630 -75850344 - B1_Mus1 SINE Alu -1 147 3 2 795 2376 267 128 35 chr15 27644630 27645098 -75849876 + Lx8 LINE L1 6799 7342 -131 2 795 871 110 0 0 chr15 27645700 27645818 -75849156 + B1_Mus1 SINE Alu 5 122 -26 2 795 501 194 39 136 chr15 27645701 27645856 -75849118 + MT2B LTR ERVL 170 309 -292 2 795 1006 293 101 41 chr15 27645903 27646416 -75848558 - L1MC1 LINE L1 -28 6305 5762 2 795 521 327 35 35 chr15 27646535 27646846 -75848128 - L1MC1 LINE L1 -568 5765 5455 2 795 2143 204 69 10 chr15 27648334 27648815 -75846159 - RMER13A LTR ERVK 0 860 352 2 795 237 108 0 0 chr15 27649710 27649747 -75845227 + (TC)n Simple_repeat Simple_repeat 1 37 0 2 795 3009 99 55 17 chr15 27649781 27650091 -75844883 - RLTR44C LTR ERVK -13 489 175 2 795 510 17 0 0 chr15 27650091 27650150 -75844824 + (CA)n Simple_repeat Simple_repeat 1 59 0 2 795 3009 99 55 17 chr15 27650150 27650310 -75844664 - RLTR44C LTR ERVK -328 174 3 2 795 633 165 0 52 chr15 27650310 27650425 -75844549 - B1_Mur1 SINE Alu -19 130 22 2 795 254 184 94 106 chr15 27650364 27650449 -75844525 - MT2B LTR ERVL -364 237 154 2 795 556 228 81 0 chr15 27650434 27650570 -75844404 - B4A SINE B4 -61 231 85 2 795 581 256 7 15 chr15 27650572 27650707 -75844267 - B1_Mur4 SINE Alu -1 149 16 2 795 3028 228 49 9 chr15 27650709 27651386 -75843588 - Lx6 LINE L1 -786 6674 5971 2 795 578 244 62 135 chr15 27651407 27651839 -75843135 + RMER2 LTR ERV1 1 540 -27 2 795 1250 125 9 37 chr15 27651858 27652074 -75842900 - Lx6 LINE L1 -1509 5951 5742 2 795 2975 191 60 52 chr15 27652061 27652129 -75842845 + Lx6 LINE L1 6648 6739 -721 2 795 1040 24 8 0 chr15 27652129 27652256 -75842718 + (GGGAGA)n Simple_repeat Simple_repeat 3 130 0 2 795 2975 191 60 52 chr15 27652256 27652826 -75842148 + Lx6 LINE L1 6740 7290 -170 2 795 348 83 0 0 chr15 27652829 27652877 -75842097 + (TGAA)n Simple_repeat Simple_repeat 1 48 0 2 795 321 174 0 0 chr15 27653048 27653117 -75841857 + (TG)n Simple_repeat Simple_repeat 1 69 0 2 795 213 39 0 0 chr15 27653148 27653174 -75841800 + (TTTTTG)n Simple_repeat Simple_repeat 4 29 0 2 795 23 68 0 0 chr15 27653296 27653340 -75841634 + AT_rich Low_complexity Low_complexity 1 44 0 2 795 370 232 59 20 chr15 27653372 27653473 -75841501 - B4A SINE B4 -179 113 9 2 795 427 291 177 29 chr15 27653691 27654002 -75840972 + MLT1D LTR MaLR 1 357 -148 2 795 627 330 149 18 chr15 27655441 27655897 -75839077 + L1MDa LINE L1 17 532 -6101 2 796 548 281 131 22 chr15 27656762 27657166 -75837808 + L1MDa LINE L1 966 1413 -5220 2 796 550 280 107 11 chr15 27657147 27657418 -75837556 + L1MDa LINE L1 1782 2078 -4555 2 796 2459 60 16 0 chr15 27657447 27657764 -75837210 + ORR1A2 LTR MaLR 1 322 -5 2 796 267 70 233 0 chr15 27657764 27657807 -75837167 + ORR1A3 LTR MaLR 274 326 0 2 796 648 204 61 7 chr15 27657954 27658102 -75836872 + MTEb LTR MaLR 3 158 -221 2 796 425 195 0 12 chr15 27658100 27658183 -75836791 + RMER12 LTR ERVK 1191 1272 -50 2 796 241 309 45 19 chr15 27658282 27658446 -75836528 + L1MDa LINE L1 3788 3957 -2580 2 796 518 155 168 76 chr15 27658454 27658573 -75836401 - B1_Mur3 SINE Alu -13 136 7 2 796 255 262 120 24 chr15 27658574 27658699 -75836275 + L1MDa LINE L1 3959 4095 -2442 2 796 314 249 131 62 chr15 27658767 27658943 -75836031 + L1MDa LINE L1 4179 4366 -2171 2 796 1190 68 0 0 chr15 27659530 27659676 -75835298 - B1_Mus2 SINE Alu 0 147 2 2 796 189 0 0 0 chr15 27660039 27660060 -75834914 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 796 192 111 0 0 chr15 27661346 27661382 -75833592 + (CAAAAA)n Simple_repeat Simple_repeat 5 40 0 2 796 180 0 0 0 chr15 27661957 27661977 -75832997 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2 796 204 358 84 0 chr15 27663864 27663959 -75831015 - MIRb SINE MIR -90 178 76 2 796 1408 221 62 42 chr15 27664118 27664472 -75830502 + ORR1D1 LTR MaLR 4 364 -10 2 796 424 225 25 0 chr15 27664873 27664953 -75830021 + B3 SINE B2 1 82 -134 2 796 286 279 74 37 chr15 27665988 27666096 -75828878 + MTEa LTR MaLR 267 378 -1 2 796 299 221 25 38 chr15 27666347 27666427 -75828547 - B1F2 SINE Alu -70 79 1 2 796 6105 55 0 3 chr15 27666454 27667202 -75827772 + L1Md_F2 LINE L1 5825 6570 -12 2 796 296 291 62 16 chr15 27667294 27667423 -75827551 + Charlie5 DNA MER1_type 2415 2549 -75 2 796 476 278 164 31 chr15 27667471 27667727 -75827247 - B4A SINE B4 0 292 3 2 796 313 297 20 74 chr15 27667998 27668147 -75826827 + Lx9 LINE L1 7232 7372 -272 2 796 2394 172 14 7 chr15 27668246 27668325 -75826649 + RLTR11A LTR ERVK 104 184 -344 2 796 570 29 0 0 chr15 27668325 27668393 -75826581 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 796 2394 172 14 7 chr15 27668393 27668735 -75826239 + RLTR11A LTR ERVK 185 527 -1 2 796 310 230 115 0 chr15 27672447 27672534 -75822440 + MLT2B4 LTR ERVL 1 97 -459 2 796 1030 166 98 20 chr15 27673193 27673396 -75821578 - URR1B DNA MER1_type 0 225 7 2 796 223 292 0 0 chr15 27678306 27678378 -75816596 + (CTG)n Simple_repeat Simple_repeat 1 72 0 2 796 285 169 0 0 chr15 27678384 27678443 -75816531 + (CCG)n Simple_repeat Simple_repeat 2 60 0 2 796 347 230 182 11 chr15 27679061 27679149 -75815825 - PB1D10 SINE Alu 0 117 15 2 796 636 279 106 32 chr15 27679824 27680172 -75814802 + L1MB3 LINE L1 5807 6180 -3 2 796 308 259 123 20 chr15 27680400 27680546 -75814428 + RSINE1 SINE B4 4 164 -1 2 796 893 147 14 7 chr15 27680841 27680985 -75813989 + B1_Mur4 SINE Alu 3 147 -3 2 796 578 279 47 7 chr15 27680992 27681140 -75813834 + RSINE1 SINE B4 12 165 0 2 796 262 386 59 18 chr15 27681781 27682000 -75812974 + L2c LINE L2 3158 3385 -2 2 796 877 83 0 15 chr15 27683256 27683390 -75811584 + (GAAA)n Simple_repeat Simple_repeat 4 135 0 2 796 1041 229 24 0 chr15 27684144 27684354 -75810620 + B3 SINE B2 2 216 0 2 796 1008 221 24 0 chr15 27684407 27684615 -75810359 + B3 SINE B2 2 214 -2 2 796 187 288 40 40 chr15 27684936 27685012 -75809962 - L2a LINE L2 -10 3416 3341 2 796 495 169 0 0 chr15 27685212 27685289 -75809685 + B3 SINE B2 2 78 -138 2 796 1605 154 184 21 chr15 27685315 27685647 -75809327 + ORR1B1 LTR MaLR 1 386 -8 2 796 240 265 0 0 chr15 27685670 27685719 -75809255 + B3 SINE B2 111 159 -57 2 796 308 319 32 57 chr15 27685867 27685990 -75808984 - B1F SINE Alu -1 148 29 2 796 295 373 0 96 chr15 27685868 27686055 -75808919 - ID_B1 SINE B4 0 224 56 2 796 1184 335 152 32 chr15 27686634 27687753 -75807221 + Charlie1a DNA MER1_type 5 1257 -198 2 796 207 162 0 0 chr15 27687771 27687808 -75807166 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 796 486 220 239 15 chr15 27688925 27689059 -75805915 - RSINE1 SINE B4 0 165 2 2 796 339 290 0 10 chr15 27689405 27689506 -75805468 + (TG)n Simple_repeat Simple_repeat 1 100 0 2 796 290 311 37 9 chr15 27690211 27690318 -75804656 + ORR1E LTR MaLR 12 121 -238 2 796 431 267 178 17 chr15 27690615 27690740 -75804234 + Lx8 LINE L1 7200 7332 -141 2 796 423 0 0 0 chr15 27690740 27690787 -75804187 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 796 431 267 178 17 chr15 27690787 27690897 -75804077 + Lx8 LINE L1 7333 7473 0 2 796 1171 314 118 154 chr15 27691405 27691966 -75803008 + MTE-int LTR MaLR 7 499 -1081 2 796 1157 91 11 69 chr15 27691966 27692154 -75802820 + B2_Mm1t SINE B2 1 177 -16 3 796 1171 314 118 154 chr15 27692154 27693120 -75801854 + MTE-int LTR MaLR 500 1479 -101 2 796 411 328 138 47 chr15 27693111 27693431 -75801543 + ORR1E LTR MaLR 9 357 -2 3 796 240 247 127 25 chr15 27694304 27694383 -75800591 + PB1D10 SINE Alu 31 117 0 3 796 358 291 9 9 chr15 27694677 27694788 -75800186 + PB1D10 SINE Alu 1 111 -6 3 796 464 245 85 0 chr15 27694793 27694899 -75800075 + B1F SINE Alu 3 117 -32 3 796 252 226 0 0 chr15 27694917 27694970 -75800004 + (CCAA)n Simple_repeat Simple_repeat 3 55 0 3 796 2213 281 100 44 chr15 27695934 27696894 -75798080 + Lx9 LINE L1 6504 7517 -127 3 796 394 165 21 21 chr15 27696899 27696992 -75797982 + (TATATG)n Simple_repeat Simple_repeat 3 95 0 3 796 288 0 0 0 chr15 27697429 27697461 -75797513 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 796 348 98 20 0 chr15 27697520 27697571 -75797403 + HAL1-3A_ME LINE L1 1976 2027 -831 3 796 883 216 34 14 chr15 27697938 27698145 -75796829 + B3 SINE B2 1 211 -5 3 796 509 312 78 24 chr15 27698233 27698566 -75796408 + Lx5 LINE L1 6697 7058 0 3 796 548 285 18 12 chr15 27699764 27699931 -75795043 + MER77 LTR ERVL 419 586 -21 3 796 206 32 32 0 chr15 27703150 27703181 -75791793 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 3 796 22 0 0 0 chr15 27704758 27704780 -75790194 + AT_rich Low_complexity Low_complexity 1 22 0 3 796 237 250 116 32 chr15 27705017 27705112 -75789862 - PB1D10 SINE Alu -14 103 1 3 796 348 24 0 0 chr15 27708315 27708356 -75786618 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 796 21 36 0 0 chr15 27708848 27708876 -75786098 + AT_rich Low_complexity Low_complexity 1 28 0 3 796 543 43 0 0 chr15 27710215 27710285 -75784689 + (GA)n Simple_repeat Simple_repeat 1 70 0 3 796 192 40 0 0 chr15 27711281 27711306 -75783668 + (GGGTG)n Simple_repeat Simple_repeat 4 28 0 3 796 206 95 24 0 chr15 27712130 27712172 -75782802 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 796 219 114 0 0 chr15 27712784 27712819 -75782155 + (A)n Simple_repeat Simple_repeat 1 35 0 3 796 293 292 14 0 chr15 27719925 27719997 -75774977 + polypurine Low_complexity Low_complexity 1 73 0 3 796 450 328 110 25 chr15 27720610 27720810 -75774164 + Tigger5 DNA MER2_type 2164 2380 -26 3 796 352 307 53 30 chr15 27720950 27721077 -75773897 + MLT1B LTR MaLR 4 133 -257 3 796 494 263 25 33 chr15 27721077 27721199 -75773775 + B1F SINE Alu 2 122 -27 3 796 521 138 11 0 chr15 27721237 27721331 -75773643 + (TA)n Simple_repeat Simple_repeat 1 95 0 3 796 333 233 99 84 chr15 27721483 27721614 -75773360 + MLT1B LTR MaLR 253 385 -5 3 796 245 257 14 0 chr15 27721903 27721973 -75773001 + L1MC4a LINE L1 6473 6543 -1339 3 796 426 69 0 0 chr15 27722015 27722073 -75772901 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 796 231 163 0 39 chr15 27722335 27722386 -75772588 + L1MC4a LINE L1 7059 7107 -775 3 796 234 0 0 0 chr15 27724061 27724087 -75770887 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 796 370 246 16 23 chr15 27724249 27724378 -75770596 + (CA)n Simple_repeat Simple_repeat 2 129 0 3 796 358 167 28 0 chr15 27724378 27724450 -75770524 + HAL1-3A_ME LINE L1 1973 2046 -812 3 796 238 222 16 16 chr15 27724498 27724562 -75770412 + MLT1B LTR MaLR 10 73 -317 3 796 552 174 45 18 chr15 27727135 27727246 -75767728 - PB1D10 SINE Alu -2 115 2 3 796 325 272 254 65 chr15 27729619 27729828 -75765146 - MLT1A0 LTR MaLR -97 268 20 3 796 250 264 299 51 chr15 27730012 27730234 -75764740 + L1MB2 LINE L1 5849 6125 -46 3 796 233 286 46 125 chr15 27731504 27731656 -75763318 + B1F SINE Alu 10 149 0 3 796 295 256 39 0 chr15 27731660 27731738 -75763236 + ID2 SINE ID 2 82 -1 3 796 482 99 0 24 chr15 27731741 27731824 -75763150 + (CATA)n Simple_repeat Simple_repeat 2 82 0 3 796 441 0 0 0 chr15 27736571 27736620 -75758354 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 796 2601 54 63 0 chr15 27737172 27737504 -75757470 + L1_Mus1 LINE L1 6215 6567 0 3 796 306 98 0 0 chr15 27737787 27737838 -75757136 + (TC)n Simple_repeat Simple_repeat 1 51 0 3 796 441 0 0 0 chr15 27737838 27737887 -75757087 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 796 1034 317 50 21 chr15 27739079 27739501 -75755473 - Lx9 LINE L1 -898 6746 6313 3 796 606 213 251 12 chr15 27739507 27739678 -75755296 - B3 SINE B2 -4 212 1 3 796 21 0 0 0 chr15 27741385 27741406 -75753568 + AT_rich Low_complexity Low_complexity 1 21 0 3 796 862 328 55 47 chr15 27741607 27741722 -75753252 - MTEa LTR MaLR 0 379 271 3 796 1095 139 0 0 chr15 27741722 27741902 -75753072 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 796 862 328 55 47 chr15 27741902 27742151 -75752823 - MTEa LTR MaLR -109 270 12 3 796 1111 203 62 54 chr15 27742620 27743085 -75751889 + RLTR20C LTR ERVK 1 578 0 3 796 2612 147 153 0 chr15 27743385 27743867 -75751107 + RMER4B LTR ERVK 17 572 -13 3 796 786 251 14 24 chr15 27748072 27748284 -75746690 - B3 SINE B2 -6 210 1 3 796 235 26 0 71 chr15 27748409 27748451 -75746523 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 796 322 307 0 62 chr15 27750171 27750331 -75744643 + HAL1-2a_MD LINE L1 2334 2483 -541 3 796 252 0 0 0 chr15 27750931 27750959 -75744015 + (GA)n Simple_repeat Simple_repeat 1 28 0 3 796 1093 207 18 14 chr15 27751303 27751523 -75743451 + URR1B DNA MER1_type 1 221 -4 3 796 26 0 0 0 chr15 27751903 27751929 -75743045 + AT_rich Low_complexity Low_complexity 1 26 0 3 796 234 299 130 82 chr15 27752346 27752492 -75742482 + MER45C DNA Tip100 291 443 -510 3 796 3246 59 7 22 chr15 27752800 27753213 -75741761 + MTB_Mm LTR MaLR 1 407 0 3 796 1060 152 147 0 chr15 27753283 27753480 -75741494 + URR1A DNA MER1_type 1 226 0 3 796 915 122 180 55 chr15 27756181 27756381 -75738593 + URR1B DNA MER1_type 1 225 0 3 796 317 240 27 0 chr15 27756825 27756900 -75738074 + ID4 SINE ID 1 77 -6 3 796 26 30 0 0 chr15 27758114 27758147 -75736827 + AT_rich Low_complexity Low_complexity 1 33 0 3 796 263 263 18 0 chr15 27758738 27758795 -75736179 - RSINE1 SINE B4 -29 136 79 3 796 607 297 12 19 chr15 27759552 27759713 -75735261 + RSINE1 SINE B4 2 161 -4 3 796 210 37 0 0 chr15 27759995 27760022 -75734952 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 3 796 276 225 47 55 chr15 27760775 27760902 -75734072 + L1MA7 LINE L1 5895 6020 -271 3 796 251 316 19 87 chr15 27762076 27762180 -75732794 - MER20 DNA MER1_type -67 152 56 3 796 249 128 0 0 chr15 27763154 27763201 -75731773 + (TGAA)n Simple_repeat Simple_repeat 1 47 0 3 796 929 196 98 0 chr15 27763722 27763916 -75731058 - B3 SINE B2 0 216 4 3 796 1962 110 26 29 chr15 27764482 27764792 -75730182 - L1_Mus4 LINE L1 0 6636 6328 3 796 1812 100 3 70 chr15 27764797 27765099 -75729875 + L1_Mus4 LINE L1 6077 6358 -278 3 796 503 182 96 73 chr15 27767277 27767413 -75727561 - B1_Mur1 SINE Alu 0 149 11 3 796 22 70 0 0 chr15 27767446 27767489 -75727485 + AT_rich Low_complexity Low_complexity 1 43 0 3 796 513 316 29 0 chr15 27767680 27767816 -75727158 + RSINE1 SINE B4 6 145 -20 3 796 841 239 33 45 chr15 27769247 27769510 -75725464 - B4 SINE B4 -1 291 48 3 796 657 0 0 0 chr15 27769541 27769614 -75725360 + (GGAAA)n Simple_repeat Simple_repeat 3 75 0 3 796 348 24 0 0 chr15 27769927 27769968 -75725006 + (GGA)n Simple_repeat Simple_repeat 1 41 0 3 796 291 259 99 93 chr15 27772091 27772253 -75722721 - ID_B1 SINE B4 -125 167 5 3 796 2156 147 57 9 chr15 27772814 27773164 -75721810 + ORR1B2 LTR MaLR 1 367 0 3 796 1063 137 109 25 chr15 27778898 27779100 -75715874 + URR1B DNA MER1_type 1 219 -6 3 796 1279 191 138 3 chr15 27779535 27779818 -75715156 + MTC LTR MaLR 89 409 -12 3 796 641 13 0 13 chr15 27785145 27785224 -75709750 + (TCC)n Simple_repeat Simple_repeat 1 78 0 3 796 228 135 0 0 chr15 27786087 27786124 -75708850 + (GGAA)n Simple_repeat Simple_repeat 2 38 0 3 797 315 0 0 0 chr15 27788898 27788933 -75706041 + (TC)n Simple_repeat Simple_repeat 1 35 0 3 797 414 0 0 0 chr15 27788933 27788978 -75705996 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 797 437 257 211 26 chr15 27790617 27790849 -75704125 - B4A SINE B4 -10 282 8 3 797 404 277 29 44 chr15 27792390 27792526 -75702448 + B1F1 SINE Alu 14 147 -2 3 797 255 191 0 0 chr15 27792531 27792599 -75702375 + (CAA)n Simple_repeat Simple_repeat 3 70 0 3 797 408 351 27 13 chr15 27793555 27793705 -75701269 - RSINE1 SINE B4 -12 153 2 3 797 702 233 24 91 chr15 27793799 27794007 -75700967 + B3 SINE B2 1 194 -22 3 797 195 42 0 0 chr15 27794014 27794038 -75700936 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 797 509 284 84 23 chr15 27795268 27795531 -75699443 + L1MD2 LINE L1 5680 5958 -401 3 797 342 0 0 0 chr15 27798582 27798620 -75696354 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3 797 311 305 55 34 chr15 27800177 27800323 -75694651 + B1F SINE Alu 1 149 0 3 797 225 127 54 18 chr15 27800394 27800450 -75694524 + (TA)n Simple_repeat Simple_repeat 1 58 0 3 797 245 270 52 60 chr15 27802537 27802671 -75692303 - MLT1E3-int LTR MaLR -1198 173 41 3 797 234 269 71 43 chr15 27802737 27802807 -75692167 - MLT1E3 LTR MaLR -68 556 485 3 797 2493 127 32 25 chr15 27804436 27804839 -75690135 + MTC LTR MaLR 16 421 0 3 797 189 107 0 0 chr15 27805057 27805085 -75689889 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 3 797 252 255 125 54 chr15 27805092 27805204 -75689770 - MIRb SINE MIR -80 188 69 3 797 296 80 0 4 chr15 27805983 27806033 -75688941 - B1_Mur4 SINE Alu -2 148 67 3 797 741 256 108 0 chr15 27806511 27806706 -75688268 + B3 SINE B2 1 216 0 3 797 1512 211 92 31 chr15 27809034 27809447 -75685527 + RMER16 LTR ERVK 1 533 0 4 797 322 313 64 71 chr15 27809564 27809800 -75685174 - L1MDa LINE L1 -4057 2576 2343 4 797 450 155 284 0 chr15 27810451 27810567 -75684407 - B1_Mur3 SINE Alu 0 149 1 4 797 297 237 152 17 chr15 27811897 27812026 -75682948 - MLT1A1 LTR MaLR -25 383 254 4 797 469 350 37 0 chr15 27812045 27812208 -75682766 - MLT1A1 LTR MaLR -234 174 6 4 797 180 266 122 79 chr15 27813725 27813864 -75681110 + L4 LINE RTE 1267 1411 -618 4 797 22 0 0 0 chr15 27814095 27814117 -75680857 + AT_rich Low_complexity Low_complexity 1 22 0 4 797 290 26 0 25 chr15 27815467 27815507 -75679467 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 797 822 146 0 0 chr15 27815536 27815707 -75679267 + (TG)n Simple_repeat Simple_repeat 2 172 0 4 797 241 349 12 12 chr15 27815773 27815857 -75679117 - B1F SINE Alu -21 128 45 4 797 303 292 123 7 chr15 27816097 27816235 -75678739 + RMER15 LTR ERVL 422 575 0 4 797 504 274 0 9 chr15 27816348 27816462 -75678512 - PB1 SINE Alu -14 113 1 4 797 405 127 0 0 chr15 27822347 27822426 -75672548 + (CA)n Simple_repeat Simple_repeat 1 79 0 4 797 504 97 11 21 chr15 27823081 27823176 -75671798 + (TG)n Simple_repeat Simple_repeat 1 94 0 4 797 219 273 55 0 chr15 27823407 27823462 -75671512 - B4A SINE B4 -173 119 62 4 797 219 273 55 0 chr15 27823459 27823514 -75671460 - B4A SINE B4 -173 119 62 4 797 474 298 26 0 chr15 27823563 27823677 -75671297 - B4A SINE B4 -173 119 3 4 797 255 267 51 39 chr15 27824208 27824286 -75670688 + MER3 DNA MER1_type 127 205 -4 4 797 509 189 30 12 chr15 27826683 27826849 -75668125 + GA-rich Low_complexity Low_complexity 3 171 0 4 797 226 23 0 122 chr15 27827166 27827215 -75667759 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 797 644 250 89 13 chr15 27829718 27829876 -75665098 + B3 SINE B2 1 170 -46 4 797 432 0 0 0 chr15 27829894 27829942 -75665032 + (GGAA)n Simple_repeat Simple_repeat 4 51 0 4 797 231 156 0 43 chr15 27830493 27830540 -75664434 + GA-rich Low_complexity Low_complexity 2 46 0 4 797 295 314 77 55 chr15 27830602 27830784 -75664190 - MIRb SINE MIR -8 260 75 4 797 225 94 0 0 chr15 27831544 27831576 -75663398 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 4 797 244 44 67 0 chr15 27831938 27831983 -75662991 + (CAAAA)n Simple_repeat Simple_repeat 4 51 0 4 797 375 41 0 0 chr15 27833322 27833371 -75661603 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 797 662 241 15 0 chr15 27835197 27835330 -75659644 + B3 SINE B2 23 157 -59 4 797 234 0 0 0 chr15 27835340 27835366 -75659608 + (CAGG)n Simple_repeat Simple_repeat 1 26 0 4 797 476 249 140 62 chr15 27835421 27835614 -75659360 + B4A SINE B4 83 290 -2 4 797 342 115 0 0 chr15 27835696 27835748 -75659226 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 4 797 225 0 0 0 chr15 27835757 27835782 -75659192 + (TC)n Simple_repeat Simple_repeat 1 25 0 4 797 471 78 0 0 chr15 27835782 27835845 -75659129 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 797 309 266 53 0 chr15 27836417 27836530 -75658444 + PB1 SINE Alu 1 119 -8 4 797 600 244 183 0 chr15 27836659 27836839 -75658135 + ID_B1 SINE B4 12 224 0 4 797 1122 242 161 35 chr15 27837537 27837909 -75657065 + MTD LTR MaLR 1 419 0 4 797 257 292 89 11 chr15 27837965 27838055 -75656919 + MTEa LTR MaLR 2 98 -281 4 797 254 328 0 57 chr15 27838245 27838301 -75656673 + MTEa LTR MaLR 264 316 -63 4 797 616 255 52 31 chr15 27838301 27838495 -75656479 + B3A SINE B2 1 198 0 4 797 254 328 0 57 chr15 27838495 27838561 -75656413 + MTEa LTR MaLR 317 378 -1 4 797 586 312 31 35 chr15 27839735 27839991 -75654983 - B4A SINE B4 -4 288 34 4 797 515 295 16 0 chr15 27841385 27841514 -75653460 - RSINE1 SINE B4 -29 136 6 4 797 1263 253 91 42 chr15 27842906 27843356 -75651618 + Lx7 LINE L1 6949 7420 -276 4 797 277 202 0 160 chr15 27844235 27844447 -75650527 + (CACTG)n Simple_repeat Simple_repeat 3 180 0 4 797 345 256 112 0 chr15 27845025 27845150 -75649824 + L1MC5 LINE L1 7659 7797 -164 4 797 1086 64 42 7 chr15 27845156 27845298 -75649676 + B1_Mm SINE Alu 1 147 0 4 797 225 233 133 0 chr15 27845440 27845500 -75649474 + ID2 SINE ID 2 69 -14 4 797 739 112 8 8 chr15 27845850 27845976 -75648998 + (GGA)n Simple_repeat Simple_repeat 3 128 0 4 797 648 245 31 111 chr15 27845996 27846221 -75648753 - MLT1A1 LTR MaLR -1 407 201 4 797 251 200 67 0 chr15 27846558 27846618 -75648356 - PB1D9 SINE Alu -5 115 52 4 797 291 113 0 0 chr15 27847146 27847199 -75647775 + (GA)n Simple_repeat Simple_repeat 1 53 0 4 797 261 0 0 0 chr15 27849401 27849430 -75645544 + (T)n Simple_repeat Simple_repeat 1 29 0 4 797 272 284 0 0 chr15 27850162 27850236 -75644738 + PB1D10 SINE Alu 1 74 -43 4 797 216 0 0 0 chr15 27850505 27850529 -75644445 + (A)n Simple_repeat Simple_repeat 1 24 0 4 797 293 231 21 78 chr15 27850540 27850669 -75644305 + B1_Mur4 SINE Alu 1 117 -32 4 797 21 57 0 0 chr15 27851181 27851216 -75643758 + AT_rich Low_complexity Low_complexity 1 35 0 4 797 1204 72 66 6 chr15 27852745 27852912 -75642062 + B2_Mm2 SINE B2 1 177 -18 4 797 405 0 0 0 chr15 27852927 27852972 -75642002 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 797 226 210 32 0 chr15 27854444 27854506 -75640468 + (TCTG)n Simple_repeat Simple_repeat 1 64 0 4 797 273 188 0 5 chr15 27856293 27856358 -75638616 - B1_Mus2 SINE Alu -9 138 48 4 797 250 317 65 37 chr15 27857956 27858064 -75636910 - B4A SINE B4 -44 248 138 4 797 228 307 26 39 chr15 27858078 27858156 -75636818 - B4A SINE B4 -208 84 8 4 797 1165 130 68 55 chr15 27859371 27859590 -75635384 + URR1A DNA MER1_type 5 226 0 4 797 333 0 0 0 chr15 27860066 27860103 -75634871 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 797 189 159 0 0 chr15 27861161 27861205 -75633769 + T-rich Low_complexity Low_complexity 1 44 0 4 797 1229 61 0 0 chr15 27861206 27861353 -75633621 - B1_Mus2 SINE Alu 0 147 1 4 797 182 37 37 0 chr15 27861644 27861671 -75633303 + (CCCCCA)n Simple_repeat Simple_repeat 2 29 0 4 797 300 283 45 65 chr15 27862340 27862495 -75632479 + MamRep1161 DNA TcMar 2 153 -804 4 797 295 276 87 120 chr15 27862761 27862821 -75632153 - Charlie1a DNA MER1_type -90 1365 1309 4 797 609 218 192 41 chr15 27862821 27862993 -75631981 + B3A SINE B2 1 198 0 4 797 295 276 87 120 chr15 27862993 27863208 -75631766 - Charlie1a DNA MER1_type -147 1308 1099 4 797 1208 167 60 284 chr15 27863229 27863715 -75631259 + ORR1C1 LTR MaLR 2 378 0 4 797 448 209 43 60 chr15 27863771 27863888 -75631086 + B3A SINE B2 1 115 -83 4 797 656 225 0 8 chr15 27863946 27864076 -75630898 + B1_Mur2 SINE Alu 11 139 -10 4 797 206 102 0 58 chr15 27864245 27864297 -75630677 + (TTTG)n Simple_repeat Simple_repeat 4 52 0 4 797 1165 62 7 0 chr15 27864297 27864443 -75630531 - B1_Mus1 SINE Alu 0 148 2 4 797 395 259 29 36 chr15 27865104 27865193 -75629781 + HAL1-2a_MD LINE L1 2395 2484 -540 4 797 1128 128 0 0 chr15 27865193 27865372 -75629602 + (CCA)n Simple_repeat Simple_repeat 1 179 0 4 797 395 259 29 36 chr15 27865372 27865422 -75629552 + HAL1-2a_MD LINE L1 2485 2532 -492 4 797 598 271 111 35 chr15 27866029 27866044 -75628930 + MTD LTR MaLR 13 23 -356 4 797 273 29 0 0 chr15 27866044 27866078 -75628896 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 797 954 255 134 7 chr15 27866078 27866403 -75628571 + MTD LTR MaLR 24 419 0 4 797 755 223 87 40 chr15 27866405 27866578 -75628396 - B3A SINE B2 -17 181 1 4 797 243 307 132 0 chr15 27866819 27866933 -75628041 + MIRb SINE MIR 102 230 -38 4 797 294 29 0 0 chr15 27867935 27867970 -75627004 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 797 222 264 51 71 chr15 27868675 27868773 -75626201 + MIRb SINE MIR 170 265 -3 4 797 270 0 0 0 chr15 27869402 27869432 -75625542 + (TAA)n Simple_repeat Simple_repeat 3 32 0 4 797 308 95 53 13 chr15 27869446 27869521 -75625453 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 4 797 180 77 0 0 chr15 27869787 27869813 -75625161 + (CAG)n Simple_repeat Simple_repeat 1 26 0 4 797 351 0 0 0 chr15 27870174 27870213 -75624761 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 797 270 0 0 0 chr15 27870213 27870242 -75624732 + (GA)n Simple_repeat Simple_repeat 1 30 0 4 797 180 0 0 0 chr15 27872732 27872752 -75622222 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 797 1410 99 5 0 chr15 27872980 27873172 -75621802 + B2_Mm1a SINE B2 1 193 0 4 797 255 61 0 0 chr15 27873884 27873917 -75621057 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 797 233 270 0 11 chr15 27874263 27874353 -75620621 + (CA)n Simple_repeat Simple_repeat 1 89 0 4 797 696 83 0 0 chr15 27876391 27876487 -75618487 + (GGA)n Simple_repeat Simple_repeat 3 98 0 4 797 464 134 152 48 chr15 27878094 27878219 -75616755 - Lx3C LINE L1 -2 6974 6837 4 797 238 295 22 4 chr15 27880246 27880344 -75614630 - ID4 SINE ID -51 101 2 4 797 3315 49 5 15 chr15 27880370 27880781 -75614193 + MTB_Mm LTR MaLR 1 407 0 4 797 237 200 0 0 chr15 27881491 27881531 -75613443 + B1F SINE Alu 23 62 -87 4 797 616 248 37 8 chr15 27882085 27882219 -75612755 - B1_Mur3 SINE Alu -11 138 1 4 797 220 305 70 70 chr15 27882598 27882799 -75612175 - L2c LINE L2 -1 3386 3186 4 797 242 242 0 22 chr15 27884307 27884380 -75610594 + MER20B DNA MER1_type 40 107 -112 4 797 405 171 53 0 chr15 27888740 27888816 -75606158 + ID4_ SINE ID 3 82 -1 4 797 765 250 111 35 chr15 27890258 27890568 -75604406 + ORR1D2 LTR MaLR 4 372 -7 4 797 253 243 63 36 chr15 27890605 27890716 -75604258 - MER112 DNA MER1_type -3 258 145 4 797 186 71 0 0 chr15 27891779 27891807 -75603167 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 4 797 503 229 141 54 chr15 27892308 27892493 -75602481 + B3 SINE B2 2 202 -14 4 797 1519 249 82 8 chr15 27893790 27894167 -75600807 - MTD LTR MaLR -14 405 1 5 797 241 312 130 23 chr15 27894611 27894742 -75600232 - MIRb SINE MIR -55 213 69 5 797 875 91 106 0 chr15 27895556 27895688 -75599286 - B1_Mm SINE Alu 0 147 2 5 797 459 0 0 0 chr15 27897175 27897226 -75597748 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 797 255 204 131 10 chr15 27897324 27897423 -75597551 - Tigger13a DNA MER2_type -537 234 124 5 797 353 70 0 17 chr15 27898961 27899019 -75595955 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 797 717 128 0 32 chr15 27899094 27899280 -75595694 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 797 796 108 6 22 chr15 27899298 27899477 -75595497 + (TG)n Simple_repeat Simple_repeat 2 177 0 5 797 30 45 0 0 chr15 27900591 27900635 -75594339 + AT_rich Low_complexity Low_complexity 1 44 0 5 797 379 250 18 106 chr15 27900639 27900809 -75594165 + Lx7 LINE L1 6425 6579 -1117 5 797 1743 246 200 57 chr15 27902521 27902719 -75592255 + Lx7 LINE L1 6560 6755 -941 5 797 1368 156 9 9 chr15 27902719 27902945 -75592029 - URR1A DNA MER1_type 0 226 1 5 797 1743 246 200 57 chr15 27902945 27903337 -75591637 + Lx7 LINE L1 6756 7248 -448 5 797 213 39 0 0 chr15 27903337 27903363 -75591611 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 797 315 0 0 0 chr15 27903363 27903397 -75591577 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 797 1743 246 200 57 chr15 27903397 27903458 -75591516 + Lx7 LINE L1 7249 7306 -390 5 797 195 42 0 0 chr15 27903468 27903492 -75591482 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 5 797 552 100 0 0 chr15 27903535 27903615 -75591359 + (CATA)n Simple_repeat Simple_repeat 1 80 0 5 797 240 266 62 25 chr15 27904784 27904865 -75590109 - MER57C2 LTR ERV1 0 434 351 5 797 272 259 167 0 chr15 27904917 27905025 -75589949 - MER57C2 LTR ERV1 -214 220 95 5 797 230 241 44 88 chr15 27905489 27905580 -75589394 - L1M3 LINE L1 -592 5579 5493 5 797 2319 189 48 98 chr15 27905871 27906433 -75588541 + RMER15 LTR ERVL 38 571 -4 5 797 218 32 32 0 chr15 27906455 27906486 -75588488 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 5 797 395 169 11 21 chr15 27906630 27906731 -75588243 - PB1D9 SINE Alu 0 120 30 5 797 1268 204 99 37 chr15 27908069 27908421 -75586553 + ORR1D1 LTR MaLR 1 374 0 5 797 237 296 101 107 chr15 27908991 27909169 -75585805 - MARNA DNA Mariner -90 496 320 5 797 492 240 61 15 chr15 27909241 27909372 -75585602 + B1F SINE Alu 12 148 -1 5 797 272 105 0 0 chr15 27909393 27909431 -75585543 + ORR1D2 LTR MaLR 1 38 -332 5 797 784 190 207 6 chr15 27910699 27910868 -75584106 + B3 SINE B2 1 203 -13 5 797 486 295 140 97 chr15 27911028 27911471 -75583503 + LTR40b LTR ERVL 1 462 0 5 797 189 314 11 23 chr15 27911672 27911760 -75583214 - L2a LINE L2 -14 3412 3326 5 797 252 0 0 0 chr15 27912208 27912236 -75582738 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 5 797 183 194 0 0 chr15 27912293 27912329 -75582645 + MIRb SINE MIR 88 123 -145 5 797 1106 62 14 27 chr15 27912686 27912834 -75582140 - B1_Mus2 SINE Alu -1 146 1 5 797 230 283 137 46 chr15 27913092 27913333 -75581641 + L1MC4 LINE L1 7104 7366 -516 5 797 300 252 23 98 chr15 27913420 27913552 -75581422 + L1MC4 LINE L1 7920 8041 -1 5 797 234 0 0 0 chr15 27914537 27914563 -75580411 + (A)n Simple_repeat Simple_repeat 1 26 0 5 797 261 0 0 0 chr15 27915876 27915905 -75579069 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 797 560 190 0 20 chr15 27916650 27916752 -75578222 + B1_Mur2 SINE Alu 49 148 -1 5 797 644 134 368 0 chr15 27918039 27918216 -75576758 - MTC LTR MaLR -10 409 169 5 798 1492 197 89 71 chr15 27918512 27918679 -75576295 + MTD LTR MaLR 19 190 -229 5 798 530 29 15 0 chr15 27918679 27918747 -75576227 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 798 1492 197 89 71 chr15 27918747 27918961 -75576013 + MTD LTR MaLR 191 407 -12 5 798 543 179 36 0 chr15 27920204 27920316 -75574658 + PB1D9 SINE Alu 1 116 -4 5 798 183 80 0 0 chr15 27920329 27920354 -75574620 + (GGGA)n Simple_repeat Simple_repeat 3 27 0 5 798 279 0 0 0 chr15 27922492 27922523 -75572451 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 798 189 0 0 0 chr15 27923120 27923141 -75571833 + (CCA)n Simple_repeat Simple_repeat 1 21 0 5 798 479 45 15 0 chr15 27925112 27925178 -75569796 + (TC)n Simple_repeat Simple_repeat 2 68 0 5 798 321 293 88 81 chr15 27925706 27925866 -75569108 + RSINE1 SINE B4 5 165 0 5 798 477 51 0 0 chr15 27925989 27926048 -75568926 - B1_Mus1 SINE Alu -79 69 11 5 798 672 261 42 88 chr15 27926055 27926248 -75568726 - B3A SINE B2 -11 187 4 5 798 433 361 8 0 chr15 27927609 27927742 -75567232 + MER94 DNA AcHobo 1 134 0 5 798 228 262 15 62 chr15 27928200 27928265 -75566709 + B4A SINE B4 1 62 -230 5 798 363 44 0 0 chr15 27928298 27928343 -75566631 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 798 410 177 60 40 chr15 27928948 27929048 -75565926 + B1_Mur1 SINE Alu 41 142 -7 5 798 24 32 0 0 chr15 27929542 27929573 -75565401 + AT_rich Low_complexity Low_complexity 1 31 0 5 798 387 253 13 0 chr15 27929725 27929804 -75565170 - ID4_ SINE ID -2 81 2 5 798 261 338 159 18 chr15 27930607 27930827 -75564147 - Charlie4 DNA MER1_type -1657 304 54 5 798 1224 28 0 20 chr15 27931478 27931626 -75563348 - B1_Mus1 SINE Alu -2 146 2 5 798 360 0 0 0 chr15 27931970 27932010 -75562964 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 798 553 222 0 0 chr15 27932972 27933071 -75561903 + B3 SINE B2 118 216 0 5 798 1138 88 0 0 chr15 27933793 27933940 -75561034 + B1_Mm SINE Alu 1 147 0 5 798 195 100 0 0 chr15 27934007 27934037 -75560937 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 5 798 2229 199 15 5 chr15 27934459 27934869 -75560105 + MTD LTR MaLR 2 415 -4 5 798 748 232 49 11 chr15 27935615 27935798 -75559176 + B3A SINE B2 8 197 -1 5 798 586 184 103 8 chr15 27935857 27935983 -75558991 + B1_Mur2 SINE Alu 5 142 -7 5 798 21 0 0 0 chr15 27936811 27936832 -75558142 + AT_rich Low_complexity Low_complexity 1 21 0 5 798 316 244 8 73 chr15 27937348 27937472 -75557502 + RMER17A LTR ERVK 361 476 -275 5 798 978 139 48 0 chr15 27938015 27938180 -75556794 - URR1A DNA MER1_type 0 226 54 5 798 260 255 0 0 chr15 27939408 27939459 -75555515 - ID SINE ID -136 88 38 5 798 214 292 62 0 chr15 27939413 27939478 -75555496 - ID4 SINE ID -1 82 14 5 798 369 222 86 32 chr15 27940324 27940417 -75554557 + PB1D7 SINE Alu 23 120 0 5 798 260 91 0 22 chr15 27940443 27940488 -75554486 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 798 675 117 0 0 chr15 27940488 27940591 -75554383 + (CA)n Simple_repeat Simple_repeat 2 104 0 5 798 274 277 136 15 chr15 27940655 27940721 -75554253 + ID4_ SINE ID 8 81 -2 5 798 241 280 53 21 chr15 27941816 27941911 -75553063 + MLT1A1 LTR MaLR 303 400 -8 5 798 239 282 28 0 chr15 27941971 27942042 -75552932 - MER5A DNA MER1_type -21 168 96 5 798 859 128 13 51 chr15 27943674 27943830 -75551144 + B1_Mur4 SINE Alu 1 150 0 5 798 366 276 89 7 chr15 27944142 27944288 -75550686 - L1MB7 LINE L1 -26 6158 6001 5 798 1002 281 181 34 chr15 27945277 27946075 -75548899 + L1MC4 LINE L1 6484 7398 -644 5 798 354 262 132 28 chr15 27946352 27946564 -75548410 + L1MC4 LINE L1 7464 7697 -345 5 798 1162 75 7 0 chr15 27946572 27946718 -75548256 + B1_Mus1 SINE Alu 2 148 0 5 798 398 369 0 0 chr15 27946806 27946917 -75548057 + PB1D10 SINE Alu 7 117 0 5 798 1211 130 90 5 chr15 27946992 27947193 -75547781 - URR1A DNA MER1_type 0 226 9 5 798 1140 68 0 13 chr15 27947575 27947725 -75547249 + B1_Mus1 SINE Alu 1 148 0 5 798 402 114 0 0 chr15 27948915 27948985 -75545989 + (TC)n Simple_repeat Simple_repeat 2 71 0 5 798 255 31 0 0 chr15 27948985 27949017 -75545957 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 798 189 0 0 0 chr15 27951945 27951966 -75543008 + (A)n Simple_repeat Simple_repeat 1 21 0 5 798 477 0 0 0 chr15 27952341 27952394 -75542580 + (TC)n Simple_repeat Simple_repeat 1 53 0 5 798 297 309 110 22 chr15 27952595 27952777 -75542197 - L3 LINE CR1 -94 4395 4198 5 798 26 30 0 0 chr15 27955046 27955079 -75539895 + GC_rich Low_complexity Low_complexity 1 33 0 5 798 35 83 0 0 chr15 27955142 27955226 -75539748 + GC_rich Low_complexity Low_complexity 1 84 0 5 798 32 67 0 0 chr15 27955347 27955407 -75539567 + GC_rich Low_complexity Low_complexity 1 60 0 5 798 235 239 0 0 chr15 27955655 27955701 -75539273 + GA-rich Low_complexity Low_complexity 2 47 0 5 798 372 326 67 47 chr15 27956513 27956706 -75538268 + L1MC3 LINE L1 6485 6681 -1104 5 798 781 311 85 35 chr15 27956774 27957034 -75537940 - B4A SINE B4 -4 288 16 5 798 1641 264 119 29 chr15 27957046 27957741 -75537233 + L1MC3 LINE L1 6715 7472 -313 5 798 323 254 65 64 chr15 27957819 27957957 -75537017 - PB1D7 SINE Alu 0 127 1 5 798 232 250 105 23 chr15 27958064 27958150 -75536824 + L1MC3 LINE L1 7686 7778 -7 5 798 1018 241 24 100 chr15 27960026 27960234 -75534740 - B4A SINE B4 -15 277 88 5 798 1321 85 23 0 chr15 27960234 27960411 -75534563 - B2_Mm2 SINE B2 -14 181 1 5 798 1018 241 24 100 chr15 27960411 27960493 -75534481 - B4A SINE B4 -205 87 9 5 798 239 341 85 6 chr15 27960578 27960743 -75534231 - Charlie16a DNA MER1_type -36 306 129 5 798 437 271 37 9 chr15 27960797 27960905 -75534069 + MLT1C LTR MaLR 22 132 -335 5 798 207 0 0 0 chr15 27961274 27961297 -75533677 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 5 798 369 43 0 0 chr15 27961297 27961343 -75533631 + (GAAA)n Simple_repeat Simple_repeat 2 48 0 5 798 244 312 112 45 chr15 27961729 27961863 -75533111 - ORR1E LTR MaLR -202 157 15 5 798 488 154 0 13 chr15 27962442 27962521 -75532453 + MTE2b LTR MaLR 5 82 -297 5 798 715 259 39 11 chr15 27962532 27962712 -75532262 + MTE2b LTR MaLR 195 379 0 5 798 549 143 184 48 chr15 27963431 27963545 -75531429 + B1_Mur4 SINE Alu 5 137 -13 5 798 225 0 0 0 chr15 27963545 27963570 -75531404 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 5 798 243 0 0 0 chr15 27964133 27964160 -75530814 + (A)n Simple_repeat Simple_repeat 1 27 0 5 798 257 336 8 89 chr15 27964165 27964289 -75530685 + MER46C DNA MER2_type 222 335 -3 6 798 219 305 103 21 chr15 27964305 27964402 -75530572 + PB1D7 SINE Alu 1 105 -15 6 798 1061 285 56 10 chr15 27964449 27964842 -75530132 + L1MB5 LINE L1 5361 5771 -413 6 798 1627 36 0 25 chr15 27964852 27965049 -75529925 + B2_Mm1a SINE B2 2 193 0 6 798 455 129 0 12 chr15 27965071 27965157 -75529817 + Lx LINE L1 6556 6640 -14 6 798 499 275 42 7 chr15 27965202 27965386 -75529588 + L1MB5 LINE L1 5749 5939 -235 6 798 387 302 7 80 chr15 27965914 27966065 -75528909 - LTR33A LTR ERVL -361 159 20 6 798 277 204 112 11 chr15 27966331 27966420 -75528554 - L5 LINE RTE -6 2259 2162 6 798 701 173 9 0 chr15 27966481 27966607 -75528367 - B1_Mur1 SINE Alu -22 127 1 6 798 490 275 55 21 chr15 27966607 27966643 -75528331 - B4 SINE B4 -202 90 50 6 798 668 201 62 35 chr15 27966804 27966948 -75528026 - B1_Mur3 SINE Alu 0 149 2 6 798 430 348 46 41 chr15 27968387 27968582 -75526392 + L4 LINE RTE 1629 1824 -205 6 798 1056 143 0 11 chr15 27968740 27969212 -75525762 + (TGGA)n Simple_repeat Simple_repeat 1 466 0 6 798 1321 272 21 32 chr15 27969215 27969595 -75525379 + MTEa LTR MaLR 1 376 -3 6 798 579 220 129 0 chr15 27969755 27969887 -75525087 + B1_Mur1 SINE Alu 1 149 0 6 798 279 284 56 56 chr15 27969910 27970052 -75524922 + MIR SINE MIR 118 259 -3 6 798 261 366 28 73 chr15 27971361 27971538 -75523436 + LTR88b LTR Gypsy? 664 832 -5 6 798 374 270 0 0 chr15 27971845 27971919 -75523055 + MTEa LTR MaLR 9 82 -277 6 798 1736 227 17 6 chr15 27971928 27972273 -75522701 - ORR1D1 LTR MaLR -25 349 1 6 798 440 305 50 61 chr15 27972333 27972602 -75522372 + MTEa LTR MaLR 76 349 -30 6 798 257 321 71 12 chr15 27973831 27973916 -75521058 - ORR1E LTR MaLR -1 358 269 6 798 720 259 95 18 chr15 27974761 27974922 -75520052 - Lx8 LINE L1 0 7473 7292 6 798 315 0 0 0 chr15 27974922 27974957 -75520017 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 798 720 259 95 18 chr15 27974957 27975078 -75519896 - Lx8 LINE L1 -182 7291 7170 6 798 217 292 79 0 chr15 27975309 27975398 -75519576 + L2 LINE L2 1870 1965 -1454 6 798 1407 54 49 5 chr15 27975562 27975747 -75519227 - B2_Mm2 SINE B2 -1 194 2 6 798 6644 6 0 0 chr15 27976076 27976802 -75518172 - L1Md_A LINE L1 0 6582 5857 6 798 196 313 205 0 chr15 27977288 27977371 -75517603 + L2 LINE L2 2691 2790 -629 6 798 594 256 124 6 chr15 27977568 27977729 -75517245 + LTR16A LTR ERVL 1 180 -271 6 798 1406 82 0 15 chr15 27977946 27978143 -75516831 + B2_Mm2 SINE B2 1 194 -1 6 798 1480 163 49 3 chr15 27978750 27979048 -75515926 + ORR1C1 LTR MaLR 2 378 0 6 798 1064 46 181 44 chr15 27979383 27979565 -75515409 + Lx3_Mus LINE L1 6796 7002 -7 6 798 360 134 0 58 chr15 27980404 27980491 -75514483 - L1Md_F2 LINE L1 0 6582 6501 6 798 217 0 61 0 chr15 27980592 27980625 -75514349 + (CAA)n Simple_repeat Simple_repeat 2 36 0 6 798 272 224 118 0 chr15 27981789 27981874 -75513100 + PB1D10 SINE Alu 21 115 -2 6 798 261 0 0 0 chr15 27981988 27982017 -75512957 + (TC)n Simple_repeat Simple_repeat 1 29 0 6 798 339 0 59 0 chr15 27982152 27982203 -75512771 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 798 486 0 0 0 chr15 27982203 27982257 -75512717 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 798 533 311 88 12 chr15 27982260 27982501 -75512473 - B4 SINE B4 -29 263 6 6 798 336 311 38 0 chr15 27982739 27982845 -75512129 + L2a LINE L2 3316 3425 -1 6 798 216 0 0 0 chr15 27982933 27982957 -75512017 + (T)n Simple_repeat Simple_repeat 1 24 0 6 798 656 256 13 6 chr15 27983449 27983606 -75511368 - Lx9 LINE L1 -1124 6349 6192 6 798 1954 266 35 22 chr15 27983706 27984199 -75510775 - Lx5 LINE L1 -18 7032 6534 6 798 225 241 37 0 chr15 27984193 27984247 -75510727 - Lx6 LINE L1 -663 6797 6742 6 798 2259 89 6 31 chr15 27984600 27984923 -75510051 + ORR1A2 LTR MaLR 5 319 -8 6 798 1253 287 52 51 chr15 27984939 27985233 -75509741 - Lx9 LINE L1 -1727 5917 5579 6 798 1178 78 3 0 chr15 27985233 27985411 -75509563 + (CATA)n Simple_repeat Simple_repeat 1 182 -186 6 798 1178 78 3 0 chr15 27985420 27985600 -75509374 + (CATA)n Simple_repeat Simple_repeat 183 368 0 6 798 1253 285 51 58 chr15 27985600 27985889 -75509085 - Lx9 LINE L1 -269 5578 5292 6 798 356 235 59 0 chr15 27985874 27985976 -75508998 - L1_Mur3 LINE L1 -606 5274 5167 6 798 455 245 33 20 chr15 27985957 27986107 -75508867 - Lx9 LINE L1 -1091 5049 4860 6 798 472 227 19 26 chr15 27986099 27986259 -75508715 - Lx9 LINE L1 -1405 4741 4580 6 798 1329 269 219 29 chr15 27986266 27986731 -75508243 + Lx8 LINE L1 6349 6912 -561 6 798 351 44 0 0 chr15 27986731 27986776 -75508198 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 798 1329 280 208 26 chr15 27986776 27987098 -75507876 + Lx8 LINE L1 6913 7283 -190 6 798 271 169 15 73 chr15 27987480 27987557 -75507417 - MER57A-int LTR ERV1 -298 5889 5827 6 798 318 268 14 99 chr15 27987820 27987888 -75507086 + MLT2B3 LTR ERVL 1 66 -488 6 798 441 0 0 0 chr15 27987888 27987937 -75507037 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 798 318 268 14 99 chr15 27987937 27988009 -75506965 + MLT2B3 LTR ERVL 67 129 -425 6 798 231 377 19 0 chr15 27988145 27988251 -75506723 + MLT2B3 LTR ERVL 385 492 -62 6 798 225 0 0 0 chr15 27988260 27988285 -75506689 + (T)n Simple_repeat Simple_repeat 1 25 0 6 798 794 183 0 34 chr15 27988719 27988866 -75506108 - B1_Mur4 SINE Alu 0 150 9 6 798 384 22 0 0 chr15 27989216 27989261 -75505713 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 798 1660 166 62 46 chr15 27990003 27990447 -75504527 - RMER17C LTR ERVK -519 439 19 6 798 782 176 35 0 chr15 27990533 27990675 -75504299 + B1_Mus2 SINE Alu 1 147 0 6 798 213 39 0 0 chr15 27990677 27990703 -75504271 + (CAAAAA)n Simple_repeat Simple_repeat 5 30 0 6 798 520 330 118 45 chr15 27990874 27991204 -75503770 + MLT1G1 LTR MaLR 2 355 -224 6 798 198 0 0 0 chr15 27991377 27991399 -75503575 + (TG)n Simple_repeat Simple_repeat 1 22 0 6 798 692 54 11 0 chr15 27991399 27991491 -75503483 + (GA)n Simple_repeat Simple_repeat 1 94 0 6 798 400 273 82 48 chr15 27991512 27991658 -75503316 + RMER15 LTR ERVL 425 575 0 6 798 342 0 0 0 chr15 27991797 27991835 -75503139 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 798 1068 223 0 19 chr15 27992259 27992474 -75502500 - B3 SINE B2 -5 211 1 6 798 207 0 0 0 chr15 27992823 27992846 -75502128 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 6 798 2159 158 11 14 chr15 27992905 27993276 -75501698 - ORR1D1 LTR MaLR 0 374 5 6 798 1240 99 33 6 chr15 27993431 27993614 -75501360 + B2_Mm2 SINE B2 2 189 -6 6 798 4703 41 5 0 chr15 27994766 27995324 -75499650 + L1Md_F2 LINE L1 6021 6581 -1 6 798 290 311 0 0 chr15 27995614 27995723 -75499251 - ID4 SINE ID -43 109 1 6 798 219 333 198 0 chr15 27995762 27995843 -75499131 - PB1D10 SINE Alu -20 97 1 6 798 348 268 12 12 chr15 27996116 27996199 -75498775 + B1F SINE Alu 66 148 -1 6 798 229 118 0 56 chr15 27996661 27996697 -75498277 + T-rich Low_complexity Low_complexity 20 53 0 6 798 1268 34 0 0 chr15 27996697 27996844 -75498130 - B1_Mus1 SINE Alu 0 148 2 6 798 229 118 0 56 chr15 27996844 27996861 -75498113 + T-rich Low_complexity Low_complexity 3 19 0 6 798 354 257 60 34 chr15 27997057 27997088 -75497886 - B1_Mur4 SINE Alu -29 121 92 6 798 302 45 23 0 chr15 27997088 27997132 -75497842 + (TTTG)n Simple_repeat Simple_repeat 4 48 0 6 798 354 257 60 34 chr15 27997132 27997217 -75497757 - B1_Mur4 SINE Alu -59 91 2 6 798 729 225 0 8 chr15 27997414 27997544 -75497430 - RSINE1 SINE B4 -34 131 3 6 798 450 167 14 0 chr15 27997612 27997684 -75497290 + RLTR14 LTR ERV1 307 379 -3 6 798 405 0 0 0 chr15 27997912 27997957 -75497017 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 798 293 283 13 80 chr15 27997979 27998129 -75496845 + L1ME2 LINE L1 5761 5900 -264 6 798 502 277 0 59 chr15 27998137 27998200 -75496774 + B1_Mm SINE Alu 1 61 -86 6 798 1675 47 0 0 chr15 27998200 27998393 -75496581 + B2_Mm1t SINE B2 1 193 0 6 798 502 277 0 59 chr15 27998393 27998448 -75496526 + B1_Mm SINE Alu 62 112 -35 6 798 316 322 8 42 chr15 27998600 27998720 -75496254 - B1_Mm SINE Alu -1 116 1 6 798 544 321 42 3 chr15 27998903 27999046 -75495928 + B1_Mur1 SINE Alu 2 149 0 6 798 2068 137 6 3 chr15 27999060 27999375 -75495599 + ORR1A3 LTR MaLR 11 326 0 6 798 1203 148 5 5 chr15 27999594 27999784 -75495190 + B2_Mm2 SINE B2 1 190 -5 6 798 493 206 20 66 chr15 28000361 28000512 -75494462 + B1_Mur4 SINE Alu 5 148 -2 1 798 260 188 16 0 chr15 28000524 28000588 -75494386 + GA-rich Low_complexity Low_complexity 2 66 0 2 798 405 123 0 0 chr15 28000596 28000661 -75494313 + (GGGA)n Simple_repeat Simple_repeat 2 66 0 3 798 791 198 167 16 chr15 28001141 28001392 -75493582 - Lx9 LINE L1 -29 7615 7327 4 798 1045 120 0 111 chr15 28001465 28001681 -75493293 - ORR1A3 LTR MaLR -132 194 3 5 798 882 151 0 14 chr15 28001792 28001933 -75493041 - B1_Mus1 SINE Alu -9 139 1 6 798 1175 101 49 27 chr15 28001941 28002125 -75492849 - B2_Mm2 SINE B2 -7 188 1 7 798 443 332 156 10 chr15 28002308 28002597 -75492377 - L1M4b LINE L1 -6042 1292 962 8 798 550 224 157 12 chr15 28002611 28002783 -75492191 - B3 SINE B2 -10 206 10 9 798 270 0 0 0 chr15 28002813 28002843 -75492131 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1 798 1167 50 0 0 chr15 28002845 28002986 -75491988 - B1_Mm SINE Alu -5 142 2 1 798 30 21 0 21 chr15 28002986 28003015 -75491959 + AT_rich Low_complexity Low_complexity 1 29 0 1 798 1344 92 27 0 chr15 28003015 28003200 -75491774 - B2_Mm2 SINE B2 -4 191 2 1 798 30 21 0 21 chr15 28003200 28003218 -75491756 + AT_rich Low_complexity Low_complexity 1 18 0 1 798 3510 97 2 6 chr15 28003221 28003698 -75491276 - MT2C_Mm LTR ERVL 0 475 1 1 798 861 271 15 0 chr15 28003698 28003897 -75491077 - B3 SINE B2 -14 202 1 1 798 945 294 65 9 chr15 28003898 28004234 -75490740 - L1M4b LINE L1 -6361 973 619 8 798 733 326 119 0 chr15 28004333 28004670 -75490304 - L1M4b LINE L1 -6847 487 111 8 798 180 0 0 0 chr15 28004670 28004690 -75490284 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1 798 681 220 0 14 chr15 28005250 28005393 -75489581 - B1_Mur2 SINE Alu -8 141 1 1 798 495 0 0 0 chr15 28005824 28005879 -75489095 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 798 635 237 187 24 chr15 28006431 28006675 -75488299 + MTD LTR MaLR 7 291 -128 2 798 1659 193 32 48 chr15 28006675 28006887 -75488087 - ORR1C1 LTR MaLR 0 378 167 2 798 474 18 0 0 chr15 28006887 28006942 -75488032 + (GA)n Simple_repeat Simple_repeat 1 55 0 2 798 1659 193 32 48 chr15 28006942 28007105 -75487869 - ORR1C1 LTR MaLR -212 166 9 2 798 422 211 83 0 chr15 28007113 28007222 -75487752 + MTD LTR MaLR 287 404 -15 2 798 456 316 45 37 chr15 28007364 28007610 -75487364 - L1MB8 LINE L1 -56 6128 5881 2 798 24 53 0 0 chr15 28007682 28007720 -75487254 + AT_rich Low_complexity Low_complexity 1 38 0 2 798 252 225 13 53 chr15 28007739 28007814 -75487160 + L1M4 LINE L1 5196 5267 -879 2 798 480 314 93 20 chr15 28007811 28008113 -75486861 - L1MB8 LINE L1 -310 5868 5545 2 798 279 289 38 19 chr15 28008121 28008227 -75486747 + L1MB8 LINE L1 5902 6009 -169 2 798 497 255 108 30 chr15 28008239 28008584 -75486390 - L1MB8 LINE L1 -661 5517 5149 2 798 307 127 0 31 chr15 28008698 28008763 -75486211 + (TTA)n Simple_repeat Simple_repeat 2 64 0 2 798 1358 93 0 20 chr15 28008791 28008988 -75485986 - B2_Mm2 SINE B2 -1 194 2 2 798 541 246 62 114 chr15 28009085 28009278 -75485696 - B3A SINE B2 -7 188 6 2 798 839 50 76 0 chr15 28009755 28009874 -75485100 - B1_Mm SINE Alu -1 146 19 2 798 455 287 0 0 chr15 28009964 28010065 -75484909 - PB1D10 SINE Alu -9 108 8 3 798 633 299 132 53 chr15 28010657 28011035 -75483939 - MLT1A1 LTR MaLR 0 408 1 3 798 513 316 30 59 chr15 28011542 28011762 -75483212 - B3A SINE B2 -9 207 3 3 798 550 215 317 6 chr15 28011943 28012107 -75482867 + B3 SINE B2 2 216 0 3 798 1028 201 55 10 chr15 28012180 28012381 -75482593 - B3 SINE B2 -5 211 2 3 798 446 265 49 117 chr15 28012517 28012722 -75482252 + ORR1E LTR MaLR 1 191 -168 3 798 893 142 0 6 chr15 28012722 28012892 -75482082 + (TTCC)n Simple_repeat Simple_repeat 4 172 0 3 798 198 0 0 0 chr15 28012893 28012915 -75482059 + (CCTG)n Simple_repeat Simple_repeat 3 24 0 3 798 425 111 0 27 chr15 28012918 28012992 -75481982 + (TCTCCC)n Simple_repeat Simple_repeat 2 73 0 3 798 1783 163 31 0 chr15 28012992 28013317 -75481657 - Lx LINE L1 0 6654 6320 3 798 393 298 61 37 chr15 28013322 28013486 -75481488 + ORR1E LTR MaLR 208 375 -4 3 798 1240 126 22 0 chr15 28013720 28013903 -75481071 + B2_Mm2 SINE B2 1 187 -8 4 798 424 291 6 18 chr15 28013930 28014098 -75480876 - Lx9 LINE L1 -2 7642 7477 4 798 1967 160 66 3 chr15 28014103 28014153 -75480821 - ORR1B1 LTR MaLR -8 386 335 4 798 291 28 0 0 chr15 28014153 28014189 -75480785 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 4 798 1967 160 66 3 chr15 28014189 28014501 -75480473 - ORR1B1 LTR MaLR -60 334 2 4 798 1103 269 72 75 chr15 28014512 28014790 -75480184 - Lx9 LINE L1 -179 7465 7188 4 798 5759 55 25 4 chr15 28014790 28015521 -75479453 - L1Md_F2 LINE L1 -12 6570 5825 4 798 1103 269 72 75 chr15 28015521 28015604 -75479370 - Lx9 LINE L1 -457 7187 7105 4 798 888 146 28 7 chr15 28015626 28015771 -75479203 - B1_Mus1 SINE Alu 0 148 1 4 798 267 133 0 0 chr15 28016318 28016363 -75478611 + (CAG)n Simple_repeat Simple_repeat 1 45 0 4 798 701 197 14 14 chr15 28016366 28016510 -75478464 + B1_Mur1 SINE Alu 5 148 -1 4 798 449 115 0 11 chr15 28016704 28016792 -75478182 + (TG)n Simple_repeat Simple_repeat 2 88 0 4 798 387 287 14 7 chr15 28016843 28016987 -75477987 + (TG)n Simple_repeat Simple_repeat 2 146 0 4 798 386 310 140 62 chr15 28018888 28019334 -75475640 - L1MC4 LINE L1 -12 8030 7550 4 798 398 310 0 26 chr15 28019334 28019450 -75475524 + PB1D10 SINE Alu 1 113 -4 5 798 386 310 140 62 chr15 28019450 28019647 -75475327 - L1MC4 LINE L1 -493 7549 7339 4 798 457 274 13 58 chr15 28019696 28019851 -75475123 - RSINE1 SINE B4 -13 152 5 5 798 413 301 52 13 chr15 28020158 28020313 -75474661 + MER2B DNA MER2_type 176 336 0 5 798 1764 207 67 0 chr15 28020329 28020716 -75474258 + MTC LTR MaLR 1 413 -8 5 798 1535 196 86 19 chr15 28020740 28021114 -75473860 - RMER1C Other Other 0 1342 944 5 798 386 305 128 22 chr15 28021117 28021429 -75473545 - L1MC4 LINE L1 -886 7156 6812 4 798 581 310 18 57 chr15 28022463 28022692 -75472282 - ID_B1 SINE B4 -3 221 2 5 798 244 156 0 22 chr15 28025589 28025635 -75469339 - ID_B1 SINE B4 -8 216 172 5 798 1438 201 116 11 chr15 28025802 28026165 -75468809 - MTD LTR MaLR 0 419 19 5 798 189 0 0 0 chr15 28026171 28026192 -75468782 + (CAAAAA)n Simple_repeat Simple_repeat 5 25 0 5 798 1628 186 49 30 chr15 28026493 28026858 -75468116 + ORR1D1 LTR MaLR 1 372 -2 5 798 1015 303 47 29 chr15 28026992 28027478 -75467496 + RMER5 LTR ERV1 40 534 0 6 798 231 399 53 13 chr15 28028137 28028287 -75466687 + LTR16C LTR ERVL 295 450 -39 6 798 664 241 0 0 chr15 28028301 28028438 -75466536 - B1F SINE Alu -7 142 6 6 798 237 364 50 17 chr15 28028339 28028459 -75466515 - B4 SINE B4 -99 193 70 6 798 1400 276 97 83 chr15 28028685 28029437 -75465537 + Charlie1 DNA MER1_type 1471 2232 -549 6 798 2163 211 5 9 chr15 28029437 28029858 -75465116 + MTD LTR MaLR 1 419 0 6 798 1400 276 97 83 chr15 28029858 28029932 -75465042 + Charlie1 DNA MER1_type 2233 2308 -473 6 798 277 253 12 74 chr15 28029932 28030013 -75464961 + B4A SINE B4 2 77 -215 6 798 330 267 7 62 chr15 28030141 28030285 -75464689 + (CA)n Simple_repeat Simple_repeat 2 137 0 6 798 189 0 0 0 chr15 28030329 28030350 -75464624 + (CA)n Simple_repeat Simple_repeat 1 21 0 6 798 288 219 48 12 chr15 28030431 28030514 -75464460 + Charlie1 DNA MER1_type 2457 2542 -239 6 798 405 0 0 0 chr15 28030517 28030562 -75464412 + (TATG)n Simple_repeat Simple_repeat 2 46 0 6 798 3089 195 48 34 chr15 28030562 28031018 -75463956 - Lx4B LINE L1 -18 7040 6565 6 798 1322 123 0 5 chr15 28031018 28031214 -75463760 - B2_Mm2 SINE B2 0 195 1 7 798 3089 195 48 34 chr15 28031214 28031426 -75463548 - Lx4B LINE L1 -494 6564 6363 6 798 671 129 10 0 chr15 28031421 28031522 -75463452 - Lx5 LINE L1 -785 6265 6164 7 798 30 27 0 0 chr15 28031605 28031642 -75463332 + AT_rich Low_complexity Low_complexity 1 37 0 7 798 600 188 31 31 chr15 28032837 28032996 -75461978 + Lx9 LINE L1 7484 7642 -2 7 798 256 260 29 59 chr15 28034573 28034675 -75460299 + MLT1I LTR MaLR 301 399 -12 7 798 1893 170 26 23 chr15 28034883 28035232 -75459742 - MTC LTR MaLR -53 368 19 7 798 270 0 0 0 chr15 28036273 28036303 -75458671 + (TTA)n Simple_repeat Simple_repeat 2 31 0 7 798 193 302 83 27 chr15 28036746 28036898 -75458076 - MIRb SINE MIR -11 197 38 7 798 691 153 23 15 chr15 28037103 28037236 -75457738 - ORR1D1 LTR MaLR 0 374 241 7 798 427 196 17 136 chr15 28037237 28037355 -75457619 - RSINE1 SINE B4 -49 116 13 7 798 296 299 9 0 chr15 28037487 28037594 -75457380 - MER33 DNA MER1_type -158 166 59 8 798 648 26 0 0 chr15 28038134 28038212 -75456762 + (TG)n Simple_repeat Simple_repeat 1 78 0 8 798 362 337 22 22 chr15 28038873 28039052 -75455922 - L1ME1 LINE L1 -3 6176 5998 8 798 261 57 0 0 chr15 28039193 28039228 -75455746 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 798 615 14 0 0 chr15 28039530 28039602 -75455372 + (TTTC)n Simple_repeat Simple_repeat 2 73 0 8 798 1444 255 93 22 chr15 28039655 28040265 -75454709 - L1ME1 LINE L1 -470 5709 5061 8 798 288 0 0 0 chr15 28040265 28040297 -75454677 + (TC)n Simple_repeat Simple_repeat 1 32 0 8 798 861 289 80 48 chr15 28040297 28040680 -75454294 - L1ME1 LINE L1 -1086 5060 4661 8 798 949 147 0 6 chr15 28041291 28041449 -75453525 - URR1A DNA MER1_type 0 226 70 8 798 416 246 265 25 chr15 28041457 28041774 -75453200 + L1MB8 LINE L1 5736 6128 -50 8 798 351 372 53 81 chr15 28041947 28042269 -75452705 + ORR1E LTR MaLR 1 313 -46 8 798 3617 10 2 0 chr15 28042269 28042664 -75452310 + MTA_Mm LTR MaLR 1 396 0 8 798 777 302 54 42 chr15 28042865 28043197 -75451777 + MTEa LTR MaLR 8 343 -36 9 798 417 264 101 25 chr15 28044250 28044448 -75450526 - MER20 DNA MER1_type -3 216 4 9 798 638 192 0 4 chr15 28044841 28045081 -75449893 + CT-rich Low_complexity Low_complexity 1 238 0 9 798 4024 110 0 2 chr15 28045381 28045945 -75449029 - L1_Mus4 LINE L1 0 6636 6074 9 798 936 297 11 29 chr15 28046085 28046366 -75448608 + B4A SINE B4 2 277 -15 9 798 1256 194 194 19 chr15 28046435 28046586 -75448388 + ORR1C2 LTR MaLR 1 195 -189 9 798 371 56 19 0 chr15 28046586 28046640 -75448334 + (TCTG)n Simple_repeat Simple_repeat 4 58 0 9 798 1256 194 194 19 chr15 28046640 28046813 -75448161 + ORR1C2 LTR MaLR 196 381 -3 9 798 613 282 30 43 chr15 28046909 28047142 -75447832 - L1MB5 LINE L1 -68 6106 5877 9 798 1326 240 66 99 chr15 28047155 28047239 -75447735 + MT2A LTR ERVL 1 84 -449 9 798 486 0 0 0 chr15 28047239 28047293 -75447681 + (TA)n Simple_repeat Simple_repeat 1 54 0 9 798 1326 240 66 99 chr15 28047293 28047754 -75447220 + MT2A LTR ERVL 85 528 -5 9 798 370 234 9 18 chr15 28047754 28047863 -75447111 - L1MB5 LINE L1 -352 5832 5725 9 798 339 286 148 35 chr15 28048216 28048419 -75446555 + L2 LINE L2 2288 2513 -906 1 798 217 139 0 0 chr15 28049285 28049321 -75445653 - B1F SINE Alu -113 36 1 1 799 504 280 94 26 chr15 28049437 28049807 -75445167 - L1ME2 LINE L1 -110 6054 5660 1 799 997 209 45 5 chr15 28049818 28050020 -75444954 - B3 SINE B2 -6 210 1 1 799 295 269 28 37 chr15 28050160 28050268 -75444706 + RMER13A LTR ERVK 564 670 -190 1 799 613 299 79 12 chr15 28050476 28050793 -75444181 - L1ME2 LINE L1 -530 5634 5296 1 799 422 265 25 70 chr15 28050921 28051079 -75443895 - B3A SINE B2 0 198 48 1 799 32 0 0 0 chr15 28051779 28051811 -75443163 + AT_rich Low_complexity Low_complexity 1 32 0 1 799 228 193 8 16 chr15 28051811 28051932 -75443042 + (TA)n Simple_repeat Simple_repeat 1 120 0 1 799 38 0 0 0 chr15 28051934 28051972 -75443002 + AT_rich Low_complexity Low_complexity 1 38 0 1 799 180 77 0 0 chr15 28052069 28052095 -75442879 + (T)n Simple_repeat Simple_repeat 1 26 0 1 799 1189 62 7 0 chr15 28052098 28052243 -75442731 - B1_Mus1 SINE Alu 0 148 3 1 799 794 153 0 7 chr15 28052531 28052676 -75442298 + CT-rich Low_complexity Low_complexity 1 144 0 1 799 508 335 38 0 chr15 28053635 28053793 -75441181 + RSINE1 SINE B4 2 165 0 1 799 45 55 0 0 chr15 28053795 28053868 -75441106 + AT_rich Low_complexity Low_complexity 1 73 0 1 799 533 191 151 0 chr15 28053931 28054057 -75440917 - B1_Mur4 SINE Alu -1 149 5 1 799 545 316 20 60 chr15 28054152 28054401 -75440573 + MLT1D LTR MaLR 265 503 -2 1 799 893 270 113 10 chr15 28054402 28054694 -75440280 + Lx8 LINE L1 7150 7471 -2 1 799 563 266 92 0 chr15 28055097 28055270 -75439704 + ORR1E LTR MaLR 3 191 -168 1 799 774 311 104 27 chr15 28056566 28057048 -75437926 + LTR53 LTR ERVL 1 519 0 1 799 2727 129 8 33 chr15 28057993 28058483 -75436491 + RLTR31B_Mm LTR ERVK 1 478 -79 1 799 295 273 80 0 chr15 28058653 28058741 -75436233 - RMER15 LTR ERVL 0 575 481 1 799 2657 173 39 135 chr15 28058927 28059603 -75435371 - RMER19C LTR ERVK 0 611 1 1 799 686 268 142 55 chr15 28060074 28060499 -75434475 + MLT1C LTR MaLR 5 443 -24 1 799 319 224 13 13 chr15 28061015 28061092 -75433882 + PB1D10 SINE Alu 40 116 -1 1 799 230 289 0 0 chr15 28061617 28061669 -75433305 - ID4_ SINE ID -2 81 30 1 799 303 93 0 0 chr15 28061736 28061779 -75433195 + (TTA)n Simple_repeat Simple_repeat 2 44 0 1 799 202 132 0 26 chr15 28062488 28062527 -75432447 + (CAAA)n Simple_repeat Simple_repeat 4 41 0 1 799 191 340 61 10 chr15 28062968 28063066 -75431908 + L3b LINE CR1 355 457 -25 1 799 1065 202 27 31 chr15 28064049 28064310 -75430664 - MLT1H1 LTR MaLR -48 507 248 1 799 252 0 0 0 chr15 28064310 28064338 -75430636 + (GA)n Simple_repeat Simple_repeat 1 28 0 1 799 976 146 0 11 chr15 28064338 28064518 -75430456 + GA-rich Low_complexity Low_complexity 3 180 0 1 799 21 0 0 0 chr15 28065119 28065140 -75429834 + AT_rich Low_complexity Low_complexity 1 21 0 1 799 414 0 0 0 chr15 28065239 28065285 -75429689 + (TTCA)n Simple_repeat Simple_repeat 4 49 0 1 799 441 321 78 63 chr15 28065486 28065755 -75429219 + MER2 DNA MER2_type 10 282 -63 1 799 1432 75 38 0 chr15 28065807 28065993 -75428981 + B2_Mm2 SINE B2 1 193 -2 1 799 251 306 29 48 chr15 28066031 28066134 -75428840 - MLT1H1 LTR MaLR -356 111 11 1 799 1111 190 32 0 chr15 28066260 28066476 -75428498 - URR1A DNA MER1_type -3 223 1 1 799 300 327 78 19 chr15 28066740 28066843 -75428131 + PB1 SINE Alu 2 110 -17 1 799 1344 67 0 0 chr15 28066846 28067026 -75427948 + (CCAA)n Simple_repeat Simple_repeat 1 180 0 1 799 1194 68 0 0 chr15 28067672 28067819 -75427155 + B1_Mm SINE Alu 1 147 0 1 799 184 385 29 9 chr15 28067848 28067953 -75427021 + L2c LINE L2 3271 3377 -10 1 799 594 84 28 0 chr15 28068102 28068209 -75426765 + (TG)n Simple_repeat Simple_repeat 1 110 0 1 799 512 315 119 8 chr15 28068239 28068492 -75426482 - B4A SINE B4 -11 281 1 1 799 297 0 0 0 chr15 28068889 28068922 -75426052 + (T)n Simple_repeat Simple_repeat 1 33 0 1 799 186 250 16 8 chr15 28069206 28069327 -75425647 + (TG)n Simple_repeat Simple_repeat 1 122 0 1 799 268 266 15 7 chr15 28069338 28069609 -75425365 + (TG)n Simple_repeat Simple_repeat 1 273 0 1 799 220 257 14 0 chr15 28069620 28069694 -75425280 + (TG)n Simple_repeat Simple_repeat 1 75 0 1 799 512 209 133 87 chr15 28069733 28069906 -75425068 + MTE2b LTR MaLR 197 377 -2 1 799 1444 166 47 17 chr15 28070457 28070786 -75424188 + ORR1B1 LTR MaLR 1 387 -7 1 799 697 144 0 15 chr15 28071632 28071766 -75423208 + (TA)n Simple_repeat Simple_repeat 2 133 0 1 799 399 322 31 97 chr15 28071856 28072207 -75422767 - MamRep434 DNA TcMar -94 332 5 1 799 406 313 75 0 chr15 28072402 28072536 -75422438 - RSINE1 SINE B4 -18 147 4 1 799 23 0 0 0 chr15 28072565 28072588 -75422386 + AT_rich Low_complexity Low_complexity 1 23 0 1 799 4983 50 2 18 chr15 28072616 28073060 -75421914 + L1Md_F2 LINE L1 5954 6397 -185 1 799 3297 25 33 0 chr15 28073060 28073458 -75421516 + RLTR10A LTR ERVK 1 411 0 1 799 4983 50 2 18 chr15 28073458 28073640 -75421334 + L1Md_F2 LINE L1 6398 6570 -12 1 799 269 65 65 0 chr15 28073705 28073751 -75421223 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1 799 1074 254 117 77 chr15 28074181 28074821 -75420153 - RMER13A LTR ERVK -125 735 1 1 799 1183 256 35 16 chr15 28075191 28075560 -75419414 + MTE2b LTR MaLR 3 378 -1 1 799 389 313 126 57 chr15 28075579 28075928 -75419046 + MLT1B LTR MaLR 1 373 -17 1 799 706 149 0 15 chr15 28076793 28076929 -75418045 + CT-rich Low_complexity Low_complexity 1 134 0 1 799 216 0 0 0 chr15 28076983 28077007 -75417967 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 799 766 309 85 48 chr15 28077179 28077892 -75417082 - L1_Rod LINE L1 -481 5819 5021 1 799 254 263 233 0 chr15 28078077 28078210 -75416764 - L1_Rod LINE L1 -1118 5025 4862 1 799 258 339 0 22 chr15 28079201 28079306 -75415668 + B4A SINE B4 1 102 -190 1 799 303 52 17 33 chr15 28079313 28079373 -75415601 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 1 799 701 192 0 0 chr15 28079376 28079501 -75415473 - B1_Mur3 SINE Alu -14 135 11 1 799 553 228 6 92 chr15 28079535 28079699 -75415275 + B4A SINE B4 143 292 0 1 799 26 38 0 36 chr15 28079823 28079856 -75415118 + AT_rich Low_complexity Low_complexity 1 32 0 1 799 743 138 333 0 chr15 28079856 28080015 -75414959 - B3 SINE B2 -2 214 3 1 799 26 38 0 36 chr15 28080015 28080036 -75414938 + AT_rich Low_complexity Low_complexity 1 21 0 1 799 361 290 32 16 chr15 28080403 28080529 -75414445 + B3 SINE B2 9 136 -80 1 799 1566 198 92 21 chr15 28080849 28081230 -75413744 - Lx9 LINE L1 -7 7637 7230 1 799 227 304 223 40 chr15 28081232 28081407 -75413567 - MLT1N2 LTR MaLR -349 213 7 1 799 30 27 0 0 chr15 28082111 28082148 -75412826 + AT_rich Low_complexity Low_complexity 1 37 0 1 799 488 119 71 0 chr15 28082753 28082837 -75412137 + B1_Mus2 SINE Alu 52 141 -6 1 799 321 26 0 0 chr15 28083101 28083139 -75411835 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 799 4271 44 2 6 chr15 28083394 28083899 -75411075 + RLTR1C LTR ERV1 1 503 0 1 799 189 0 0 0 chr15 28085358 28085379 -75409595 + (TTAGGG)n Simple_repeat Simple_repeat 2 22 0 1 799 232 291 37 37 chr15 28085519 28085601 -75409373 - ID4 SINE ID 0 83 2 1 799 612 260 42 19 chr15 28085979 28086191 -75408783 - L1MA8 LINE L1 -73 6218 6002 1 799 223 280 80 0 chr15 28086746 28086821 -75408153 - ID SINE ID -142 82 2 1 799 695 271 6 6 chr15 28087058 28087218 -75407756 + RSINE1 SINE B4 3 162 -3 1 799 707 184 0 0 chr15 28087441 28087566 -75407408 + B1_Mur4 SINE Alu 13 137 -13 1 799 1250 35 0 0 chr15 28087714 28087858 -75407116 + B1_Mus1 SINE Alu 1 144 -4 1 799 233 254 43 29 chr15 28087888 28087957 -75407017 + PB1D10 SINE Alu 48 117 0 1 799 229 250 8 43 chr15 28089115 28089376 -75405598 + CT-rich Low_complexity Low_complexity 1 251 0 1 799 423 0 0 0 chr15 28089389 28089436 -75405538 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 799 204 200 0 0 chr15 28089556 28089606 -75405368 + CT-rich Low_complexity Low_complexity 1 50 0 1 799 245 109 0 21 chr15 28089705 28089752 -75405222 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 799 245 109 0 21 chr15 28089864 28089911 -75405063 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 799 715 321 23 43 chr15 28091250 28091550 -75403424 + MLT1B LTR MaLR 30 323 -67 1 799 294 288 131 25 chr15 28092308 28092470 -75402504 - MLT1G LTR MaLR -289 266 90 1 799 1134 258 46 19 chr15 28092472 28092839 -75402135 - ORR1C1 LTR MaLR 0 378 2 1 799 357 130 0 0 chr15 28092850 28092904 -75402070 - MurERV4_19-int LTR ERVK -5336 444 391 1 799 1728 214 8 35 chr15 28093087 28093464 -75401510 - ORR1B2 LTR MaLR 0 367 1 1 799 571 250 90 90 chr15 28093930 28094097 -75400877 + B3A SINE B2 2 168 -25 1 799 622 231 8 0 chr15 28094173 28094294 -75400680 - ID_B1 SINE B4 0 224 103 1 799 315 122 0 0 chr15 28094296 28094345 -75400629 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 799 314 286 41 0 chr15 28094367 28094465 -75400509 - PB1D7 SINE Alu -2 118 17 1 799 26 0 0 0 chr15 28095412 28095438 -75399536 + AT_rich Low_complexity Low_complexity 1 26 0 1 799 325 298 88 125 chr15 28095824 28096303 -75398671 - MLT1C LTR MaLR -4 463 3 1 799 340 318 77 28 chr15 28096904 28097085 -75397889 + MLT1A LTR MaLR 133 322 -52 1 799 225 0 0 0 chr15 28097085 28097110 -75397864 + (T)n Simple_repeat Simple_repeat 1 25 0 1 799 1098 89 7 0 chr15 28097127 28097273 -75397701 - B1_Mus1 SINE Alu 0 148 2 1 799 260 158 0 50 chr15 28097293 28097373 -75397601 + T-rich Low_complexity Low_complexity 3 78 0 2 799 723 186 57 0 chr15 28097376 28097516 -75397458 - B1_Mus1 SINE Alu 0 148 1 2 799 477 0 0 0 chr15 28097672 28097725 -75397249 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 799 626 165 91 0 chr15 28097909 28098030 -75396944 - MTC LTR MaLR -8 413 282 2 799 1687 141 11 0 chr15 28098340 28098616 -75396358 - MTC LTR MaLR -142 279 1 2 799 266 125 0 20 chr15 28098814 28098863 -75396111 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 799 289 225 175 0 chr15 28098863 28098943 -75396031 - B3A SINE B2 -103 95 2 2 799 1196 254 4 30 chr15 28098966 28099230 -75395744 - Lx8 LINE L1 -153 7320 7064 2 799 242 283 126 32 chr15 28099251 28099346 -75395628 + Arthur1 DNA Tip100 546 649 -3298 2 799 189 0 0 0 chr15 28099376 28099397 -75395577 + (TA)n Simple_repeat Simple_repeat 2 22 0 2 799 298 289 43 32 chr15 28099397 28099490 -75395484 - B3A SINE B2 -15 183 92 2 799 369 312 59 31 chr15 28099687 28099847 -75395127 + B4 SINE B4 40 206 -86 2 799 1174 36 0 0 chr15 28099847 28099985 -75394989 + B1_Mus1 SINE Alu 1 138 -10 2 799 189 0 0 0 chr15 28099985 28100006 -75394968 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2 799 315 351 40 83 chr15 28100006 28100096 -75394878 + B4A SINE B4 207 279 -13 2 799 35 0 0 0 chr15 28100800 28100835 -75394139 + AT_rich Low_complexity Low_complexity 1 35 0 2 799 22 80 0 0 chr15 28102474 28102524 -75392450 + AT_rich Low_complexity Low_complexity 1 50 0 2 799 257 227 29 43 chr15 28102685 28102716 -75392258 + (TATG)n Simple_repeat Simple_repeat 1 29 0 2 799 2384 112 129 2 chr15 28102716 28103111 -75391863 - BGLII_A LTR ERVK 0 445 1 2 799 257 227 29 43 chr15 28103111 28103148 -75391826 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2 799 237 33 0 0 chr15 28103182 28103212 -75391762 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 799 785 261 8 84 chr15 28103639 28103877 -75391097 + Lx5 LINE L1 6831 7050 0 2 799 24 32 0 0 chr15 28103877 28103908 -75391066 + AT_rich Low_complexity Low_complexity 1 31 0 2 799 1385 214 111 18 chr15 28104225 28104567 -75390407 + ORR1D1 LTR MaLR 1 374 0 2 799 476 344 94 75 chr15 28104681 28105096 -75389878 - MLT1D LTR MaLR -70 435 13 2 799 305 243 40 87 chr15 28105476 28105540 -75389434 + Charlie1a DNA MER1_type 1314 1372 -83 2 799 3815 47 11 11 chr15 28105540 28106018 -75388956 + L1Md_F3 LINE L1 6106 6583 -1 2 799 305 243 40 87 chr15 28106018 28106102 -75388872 + Charlie1a DNA MER1_type 1373 1455 0 2 799 305 282 13 0 chr15 28106447 28106525 -75388449 - Lx8 LINE L1 -201 7272 7194 2 799 1135 251 13 0 chr15 28107039 28107266 -75387708 + Lx8 LINE L1 7075 7304 -169 2 799 1189 297 87 25 chr15 28107361 28107762 -75387212 + Lx8 LINE L1 6456 6881 -592 2 799 371 311 51 94 chr15 28107945 28108286 -75386688 + RMER13A LTR ERVK 183 567 -60 2 799 998 265 93 25 chr15 28108555 28108876 -75386098 + Lx8 LINE L1 6887 7229 -244 2 799 258 32 0 0 chr15 28110227 28110258 -75384716 + (CAAG)n Simple_repeat Simple_repeat 4 34 0 2 799 1799 138 150 6 chr15 28110364 28110698 -75384276 + ORR1C2 LTR MaLR 3 384 0 2 799 396 246 384 54 chr15 28111162 28111407 -75383567 + MLT1A0 LTR MaLR 1 326 -39 2 799 708 31 82 0 chr15 28111407 28111505 -75383469 + B2_Mm2 SINE B2 2 107 -88 2 799 2693 170 22 14 chr15 28112268 28112762 -75382212 + Lx5 LINE L1 6550 7047 -3 2 799 684 115 0 0 chr15 28113067 28113171 -75381803 + (TCCC)n Simple_repeat Simple_repeat 2 105 0 2 799 239 214 0 14 chr15 28113163 28113234 -75381740 + CT-rich Low_complexity Low_complexity 1 70 0 2 799 494 303 21 0 chr15 28113235 28113377 -75381597 - B4A SINE B4 -120 172 28 2 799 1382 156 60 33 chr15 28113959 28114258 -75380716 + RMER1B Other Other 751 1057 -9 2 799 1307 95 20 45 chr15 28114713 28114912 -75380062 - B2_Mm2 SINE B2 0 195 2 2 799 673 196 104 6 chr15 28114914 28115078 -75379896 - MTD LTR MaLR -6 413 234 2 799 674 310 19 104 chr15 28115281 28115598 -75379376 + B4 SINE B4 1 290 -2 2 799 266 229 163 30 chr15 28116030 28116165 -75378809 - LTR48 LTR ERV1 -633 154 2 2 799 417 324 29 0 chr15 28116511 28116681 -75378293 + L1M5 LINE L1 5610 5784 -340 2 799 279 79 0 0 chr15 28116821 28116859 -75378115 - ID4 SINE ID -11 72 35 2 799 261 229 49 0 chr15 28116859 28116882 -75378092 - tRNA-Ala-GCY_ tRNA tRNA -9 66 3 2 799 715 131 66 0 chr15 28117010 28117132 -75377842 + B3 SINE B2 1 130 -86 2 799 635 211 40 34 chr15 28117345 28117522 -75377452 - B3 SINE B2 -9 207 30 2 799 22 0 0 0 chr15 28117595 28117617 -75377357 + AT_rich Low_complexity Low_complexity 1 22 0 2 799 765 282 14 18 chr15 28118984 28119201 -75375773 + ID_B1 SINE B4 2 217 -7 2 799 371 168 8 60 chr15 28119208 28119341 -75375633 + A-rich Low_complexity Low_complexity 2 127 0 2 799 212 86 29 0 chr15 28120028 28120063 -75374911 + (CCCCCT)n Simple_repeat Simple_repeat 1 36 0 2 799 718 171 11 22 chr15 28120063 28120242 -75374732 + C-rich Low_complexity Low_complexity 3 179 0 2 799 900 289 34 82 chr15 28120461 28120849 -75374125 + ORR1D2 LTR MaLR 1 369 -1 2 799 23 68 0 0 chr15 28120984 28121028 -75373946 + AT_rich Low_complexity Low_complexity 1 44 0 2 799 207 0 0 0 chr15 28121868 28121891 -75373083 + (T)n Simple_repeat Simple_repeat 1 23 0 2 799 811 286 81 4 chr15 28123842 28124088 -75370886 + B4A SINE B4 24 288 -4 2 799 306 0 0 0 chr15 28124844 28124878 -75370096 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 799 913 284 0 13 chr15 28124881 28125116 -75369858 - B4A SINE B4 -31 261 30 2 799 743 219 20 0 chr15 28125395 28125541 -75369433 - B1_Mur1 SINE Alu 0 149 1 2 799 408 261 17 9 chr15 28125731 28125847 -75369127 + MTEb LTR MaLR 1 117 -262 2 799 324 255 75 34 chr15 28125959 28126105 -75368869 + Lx5 LINE L1 6880 7031 -19 2 799 261 83 0 0 chr15 28126105 28126141 -75368833 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 2 799 703 200 58 70 chr15 28126811 28127053 -75367921 + Lx9 LINE L1 7402 7640 -4 2 799 1260 155 94 116 chr15 28127063 28127392 -75367582 + ORR1A4 LTR MaLR 8 329 0 2 799 348 294 147 29 chr15 28128235 28128480 -75366494 - Kanga1a DNA Tc2 -5 749 476 2 799 447 339 84 16 chr15 28128475 28128724 -75366250 - Kanga1a DNA Tc2 -395 359 94 2 799 353 196 14 10 chr15 28128750 28128849 -75366125 + BC1_Mm scRNA scRNA 2 101 -51 2 799 949 257 24 48 chr15 28129351 28129645 -75365329 + B4A SINE B4 6 292 0 2 799 426 20 0 0 chr15 28129696 28129747 -75365227 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 799 315 0 0 0 chr15 28130077 28130112 -75364862 + (TTCTC)n Simple_repeat Simple_repeat 1 35 0 2 799 1200 111 0 0 chr15 28130113 28130293 -75364681 + (TC)n Simple_repeat Simple_repeat 1 180 0 2 799 795 146 15 0 chr15 28130297 28130434 -75364540 - B1_Mur3 SINE Alu 0 149 11 2 799 1216 48 0 0 chr15 28130465 28130611 -75364363 - B1_Mm SINE Alu -1 146 1 2 799 609 262 67 34 chr15 28130744 28130953 -75364021 - B3 SINE B2 0 216 1 2 799 443 289 118 37 chr15 28132178 28132448 -75362526 + LTR48 LTR ERV1 484 775 -12 2 799 804 174 42 0 chr15 28132715 28132859 -75362115 - B1_Mur4 SINE Alu 0 150 1 2 799 384 191 42 21 chr15 28134762 28134858 -75360116 - ID_B1 SINE B4 -2 222 125 2 799 1290 85 64 0 chr15 28135279 28135467 -75359507 - L1Md_F2 LINE L1 -12 6570 6371 2 799 3346 39 0 0 chr15 28135467 28135857 -75359117 + L1Md_F2 LINE L1 5961 6350 -232 2 799 331 214 130 20 chr15 28137861 28137961 -75357013 + B3 SINE B2 2 112 -104 2 799 443 186 0 58 chr15 28137979 28138082 -75356892 + PB1D9 SINE Alu 6 102 -18 2 799 190 0 67 0 chr15 28138419 28138449 -75356525 + (TTTTTG)n Simple_repeat Simple_repeat 6 37 0 2 799 297 295 8 67 chr15 28139772 28139892 -75355082 - Lx7 LINE L1 -449 7247 7135 2 799 486 143 136 45 chr15 28139911 28140018 -75354956 - URR1B DNA MER1_type 0 225 109 2 799 1558 148 13 139 chr15 28140018 28140487 -75354487 + RMER17C LTR ERVK 1 410 0 2 799 244 171 500 0 chr15 28140487 28140563 -75354411 - URR1B DNA MER1_type -112 113 1 2 799 235 192 19 19 chr15 28140592 28140645 -75354329 - L2a LINE L2 -16 3410 3358 2 799 661 68 34 8 chr15 28141351 28141469 -75353505 + (TCTA)n Simple_repeat Simple_repeat 4 124 0 2 799 709 245 52 52 chr15 28143154 28143365 -75351609 - MTEb LTR MaLR -7 372 162 2 799 537 183 0 0 chr15 28143365 28143469 -75351505 + (TA)n Simple_repeat Simple_repeat 1 104 0 2 799 1846 174 39 17 chr15 28143478 28143646 -75351328 - ORR1D1 LTR MaLR 0 374 197 2 799 764 223 137 106 chr15 28143646 28144003 -75350971 - RLTR9A LTR ERVK 0 368 1 2 799 1846 174 39 17 chr15 28144003 28144196 -75350778 - ORR1D1 LTR MaLR -178 196 5 2 799 318 238 139 0 chr15 28144193 28144294 -75350680 - B1F2 SINE Alu -24 125 11 2 799 331 260 0 0 chr15 28144226 28144303 -75350671 - ID_B1 SINE B4 -65 159 83 2 799 837 276 9 5 chr15 28146487 28146702 -75348272 - B3 SINE B2 0 216 1 2 799 257 51 0 25 chr15 28146811 28146851 -75348123 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 799 366 271 190 29 chr15 28146922 28147059 -75347915 - RSINE1 SINE B4 -3 162 4 2 799 242 265 135 35 chr15 28148534 28148675 -75346299 + L1ME4a LINE L1 5957 6111 -13 2 799 342 0 0 0 chr15 28149292 28149330 -75345644 + (TATG)n Simple_repeat Simple_repeat 4 41 0 2 799 6173 118 21 3 chr15 28149337 28150278 -75344696 - RMER17B LTR ERVK 0 958 1 2 799 404 288 170 14 chr15 28150295 28150513 -75344461 - Lx8 LINE L1 -1 7472 7221 2 799 25 0 0 0 chr15 28150513 28150538 -75344436 + AT_rich Low_complexity Low_complexity 1 25 0 2 799 740 201 0 11 chr15 28150847 28151028 -75343946 + GA-rich Low_complexity Low_complexity 2 180 0 2 799 402 21 0 0 chr15 28151692 28151739 -75343235 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 799 1000 254 161 11 chr15 28151772 28152119 -75342855 - MT2A LTR ERVL -134 399 1 3 799 486 300 137 14 chr15 28152119 28152403 -75342571 - L1MB3 LINE L1 -324 5859 5541 3 799 227 59 0 56 chr15 28152407 28152443 -75342531 - L1M3 LINE L1 -687 5484 5451 3 799 2096 108 16 0 chr15 28152453 28152767 -75342207 - ORR1A2 LTR MaLR -8 319 1 3 799 772 109 23 11 chr15 28152802 28152978 -75341996 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 3 799 454 332 89 71 chr15 28153102 28153371 -75341603 - B4 SINE B4 -11 281 8 3 799 414 232 16 68 chr15 28154146 28154374 -75340600 + (TG)n Simple_repeat Simple_repeat 1 216 0 3 799 879 59 0 0 chr15 28154387 28154505 -75340469 + (TG)n Simple_repeat Simple_repeat 2 119 0 3 799 710 332 65 16 chr15 28155057 28155302 -75339672 + B4A SINE B4 1 257 -35 3 799 819 234 21 0 chr15 28155302 28155447 -75339527 - Lx5 LINE L1 -92 6958 6811 3 799 265 229 0 0 chr15 28155447 28155508 -75339466 + Lx5 LINE L1 6990 7050 0 3 799 519 56 0 0 chr15 28155608 28155679 -75339295 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 799 377 20 20 0 chr15 28155679 28155728 -75339246 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 799 430 290 62 36 chr15 28155943 28156136 -75338838 - LTR78 LTR ERV1 -15 1289 1092 3 799 299 327 19 37 chr15 28156823 28156931 -75338043 + MER81 DNA AcHobo 2 107 -7 3 799 657 251 40 12 chr15 28157606 28157779 -75337195 + B3 SINE B2 23 200 -16 3 799 303 266 124 52 chr15 28157816 28158026 -75336948 - RMER20B LTR ERVK -53 463 235 3 799 358 286 90 34 chr15 28158203 28158380 -75336594 + LTR78 LTR ERV1 1072 1258 -46 3 799 319 250 0 0 chr15 28159525 28159593 -75335381 + ID4_ SINE ID 2 69 -14 3 799 1274 71 60 5 chr15 28160399 28160583 -75334391 + L1_Mus2 LINE L1 6373 6566 0 3 799 491 277 25 82 chr15 28160706 28160736 -75334238 + CYRA11_Mm Unknown Y-chromosome 147 162 -455 3 799 1223 180 9 0 chr15 28160736 28160953 -75334021 - URR1A DNA MER1_type 0 226 8 3 799 455 175 16 16 chr15 28161045 28161167 -75333807 + (TG)n Simple_repeat Simple_repeat 2 123 0 3 799 222 191 0 0 chr15 28161391 28161433 -75333541 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 799 303 121 0 0 chr15 28161433 28161491 -75333483 + (GA)n Simple_repeat Simple_repeat 2 59 0 3 799 375 145 0 0 chr15 28163350 28163419 -75331555 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 799 730 261 0 65 chr15 28163432 28163633 -75331341 + B3A SINE B2 11 198 0 3 799 637 336 153 5 chr15 28164495 28164893 -75330081 - MLT1F2 LTR MaLR -9 551 95 3 799 761 76 43 0 chr15 28165740 28165930 -75329044 + (TCTA)n Simple_repeat Simple_repeat 1 198 0 3 799 22 56 0 0 chr15 28166189 28166225 -75328749 + AT_rich Low_complexity Low_complexity 1 36 0 3 799 778 270 18 28 chr15 28167219 28167436 -75327538 - B3 SINE B2 0 216 2 3 799 4200 81 4 4 chr15 28168754 28169289 -75325685 + L1_Mus3 LINE L1 6102 6636 -2 3 799 420 147 0 0 chr15 28169415 28169490 -75325484 + (TCCC)n Simple_repeat Simple_repeat 4 78 0 3 799 31 68 0 0 chr15 28170075 28170134 -75324840 + AT_rich Low_complexity Low_complexity 1 59 0 3 799 940 304 77 14 chr15 28170712 28171168 -75323806 + Lx9 LINE L1 6906 7527 -117 3 799 224 127 15 60 chr15 28171169 28171236 -75323738 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 3 799 366 270 15 0 chr15 28173346 28173444 -75321530 + B4 SINE B4 3 107 -185 3 799 306 50 0 0 chr15 28173453 28173493 -75321481 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 799 187 359 78 0 chr15 28173646 28173749 -75321225 - MIR SINE MIR -33 229 119 3 799 219 179 53 18 chr15 28174341 28174398 -75320576 + (TGAG)n Simple_repeat Simple_repeat 4 62 0 3 799 451 75 18 22 chr15 28174407 28174487 -75320487 + B1_Mm SINE Alu 47 147 0 3 799 306 0 0 0 chr15 28174487 28174521 -75320453 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 3 799 413 327 0 0 chr15 28175265 28175366 -75319608 + PB1D10 SINE Alu 12 112 -5 3 799 279 255 0 0 chr15 28176626 28176677 -75318297 + ID4 SINE ID 22 72 -11 3 799 806 181 7 0 chr15 28176678 28176956 -75318018 + (CA)n Simple_repeat Simple_repeat 1 280 0 3 799 213 65 0 0 chr15 28176977 28177008 -75317966 + (AGGGGG)n Simple_repeat Simple_repeat 4 34 0 3 799 490 205 195 0 chr15 28177060 28177255 -75317719 - L1_Mur2 LINE L1 -4233 1644 1412 3 799 622 342 55 13 chr15 28177825 28178062 -75316912 - B4A SINE B4 -4 288 42 3 799 422 345 72 29 chr15 28178508 28178884 -75316090 - L2 LINE L2 -982 2437 2046 3 799 468 301 36 14 chr15 28178936 28179074 -75315900 + ID_B1 SINE B4 75 215 -9 3 799 228 342 26 0 chr15 28179194 28179270 -75315704 - ID4 SINE ID -4 79 2 3 799 319 265 121 0 chr15 28179288 28179371 -75315603 - PB1 SINE Alu -34 93 1 3 799 336 48 0 0 chr15 28179711 28179753 -75315221 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 799 495 0 0 0 chr15 28179753 28179808 -75315166 + (CTA)n Simple_repeat Simple_repeat 1 55 0 3 800 224 268 56 14 chr15 28180526 28180598 -75314376 + MIRc SINE MIR 93 167 -101 3 800 203 175 0 0 chr15 28181077 28181117 -75313857 + T-rich Low_complexity Low_complexity 1 40 0 3 800 855 65 187 8 chr15 28181117 28181240 -75313734 - B1_Mus2 SINE Alu -1 146 2 3 800 253 267 45 34 chr15 28181542 28181631 -75313343 - Tigger5 DNA MER2_type -49 2357 2268 3 800 38898 30 0 0 chr15 28182521 28189154 -75305820 - L1Md_T LINE L1 0 6585 1 3 800 200 257 14 41 chr15 28189295 28189368 -75305606 + CT-rich Low_complexity Low_complexity 5 75 0 3 800 250 216 0 73 chr15 28189376 28189431 -75305543 - ID4 SINE ID -18 65 15 3 800 1446 66 27 16 chr15 28189867 28190052 -75304922 - B2_Mm2 SINE B2 -6 189 3 3 800 741 223 37 115 chr15 28190701 28190794 -75304180 + MTD LTR MaLR 219 290 -129 3 800 1122 82 7 27 chr15 28190794 28190944 -75304030 - B1_Mus1 SINE Alu 0 148 2 3 800 741 223 37 115 chr15 28190944 28191068 -75303906 + MTD LTR MaLR 291 419 0 3 800 295 325 68 43 chr15 28191377 28191538 -75303436 + L3b LINE CR1 202 366 -116 3 800 668 317 118 38 chr15 28191860 28192257 -75302717 - MLT1D LTR MaLR -76 429 1 3 800 1671 203 22 97 chr15 28192780 28193184 -75301790 + ORR1D1 LTR MaLR 1 374 0 3 800 216 0 0 0 chr15 28193275 28193299 -75301675 + (T)n Simple_repeat Simple_repeat 1 24 0 3 800 25 31 0 0 chr15 28194436 28194468 -75300506 + AT_rich Low_complexity Low_complexity 1 32 0 3 800 402 21 0 0 chr15 28194476 28194523 -75300451 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 800 245 206 16 16 chr15 28194568 28194632 -75300342 - B3A SINE B2 -134 64 1 3 800 428 342 47 17 chr15 28194632 28194861 -75300113 - MER68 LTR ERVL -287 276 41 3 800 390 339 129 28 chr15 28195209 28195573 -75299401 - L1ME4a LINE L1 -265 5859 5459 3 800 1105 184 86 94 chr15 28195723 28195863 -75299111 - Lx9 LINE L1 -7 7637 7482 3 800 441 0 0 0 chr15 28195863 28195912 -75299062 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 800 1105 184 86 94 chr15 28195912 28196132 -75298842 - Lx9 LINE L1 -163 7481 7280 3 800 26 0 0 0 chr15 28196623 28196649 -75298325 + AT_rich Low_complexity Low_complexity 1 26 0 3 800 3925 92 21 11 chr15 28196726 28197255 -75297719 - Lx LINE L1 -5 6649 6116 3 800 1365 237 163 13 chr15 28197335 28197733 -75297241 - Lx8 LINE L1 -2 7471 7014 3 800 493 98 10 19 chr15 28198380 28198484 -75296490 + (CTAA)n Simple_repeat Simple_repeat 3 105 0 3 800 995 304 15 4 chr15 28198587 28198861 -75296113 - MTE2b LTR MaLR -4 375 99 3 800 2303 124 20 25 chr15 28199476 28199832 -75295142 - Lx2 LINE L1 -6 6991 6638 3 800 629 233 101 30 chr15 28202227 28202395 -75292579 - B3A SINE B2 -15 183 4 3 800 194 91 0 29 chr15 28203026 28203060 -75291914 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 3 800 614 279 97 0 chr15 28203087 28203252 -75291722 + B3A SINE B2 1 181 -17 3 800 404 321 8 8 chr15 28203546 28203678 -75291296 - L1MB7 LINE L1 -106 6576 6445 3 800 547 266 24 0 chr15 28203849 28203973 -75291001 - B1F2 SINE Alu -2 147 21 3 800 331 309 29 14 chr15 28203974 28204112 -75290862 - L1MB7 LINE L1 -351 6330 6191 3 800 952 297 24 14 chr15 28204170 28204457 -75290517 - B4A SINE B4 -2 290 1 3 800 721 331 51 17 chr15 28204457 28204872 -75290102 - L1MB7 LINE L1 -498 6184 5756 3 800 627 317 136 17 chr15 28204902 28205322 -75289652 - L1MB7 LINE L1 -946 5698 5229 3 800 447 314 21 42 chr15 28205610 28205803 -75289171 - L1MB7 LINE L1 -1411 5233 5045 3 800 1141 231 91 34 chr15 28205839 28206107 -75288867 + Lx7 LINE L1 7045 7318 -378 3 800 246 80 60 0 chr15 28206107 28206157 -75288817 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 800 1141 231 91 34 chr15 28206157 28206238 -75288736 + Lx7 LINE L1 7319 7413 -283 3 800 22 0 0 0 chr15 28206238 28206260 -75288714 + AT_rich Low_complexity Low_complexity 1 22 0 3 800 4033 39 0 7 chr15 28206260 28206722 -75288252 - L1Md_F3 LINE L1 -4 6580 6122 3 800 202 164 66 0 chr15 28206807 28206868 -75288106 + (TAAA)n Simple_repeat Simple_repeat 3 67 0 3 800 1098 74 0 43 chr15 28206912 28207053 -75287921 + B1_Mus1 SINE Alu 2 136 -12 3 800 266 283 60 33 chr15 28207236 28207386 -75287588 - L1MB7 LINE L1 -5604 938 785 3 800 381 22 0 0 chr15 28207489 28207535 -75287439 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 800 359 366 20 56 chr15 28207762 28208158 -75286816 - L1MB7 LINE L1 -6112 430 49 3 800 222 37 0 0 chr15 28208796 28208823 -75286151 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 800 549 273 88 122 chr15 28208852 28209148 -75285826 - B4A SINE B4 -2 290 5 3 800 4633 194 38 5 chr15 28209384 28210244 -75284730 - Lx5 LINE L1 -335 6715 5827 3 800 38935 41 0 3 chr15 28210269 28216510 -75278464 - L1Md_T LINE L1 0 6585 266 3 800 4776 151 15 1 chr15 28216509 28217293 -75277681 - Lx5 LINE L1 -41 5836 5042 3 800 359 224 50 10 chr15 28217735 28217834 -75277140 - MTEa LTR MaLR 0 379 277 3 800 1326 246 3 41 chr15 28217949 28218241 -75276733 - MTEa LTR MaLR -98 281 1 3 800 219 69 0 0 chr15 28219350 28219379 -75275595 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 800 27 92 0 0 chr15 28219379 28219455 -75275519 + AT_rich Low_complexity Low_complexity 1 76 0 3 800 224 312 46 107 chr15 28219480 28219509 -75275465 - B3A SINE B2 -10 188 123 4 800 275 353 25 25 chr15 28219509 28219628 -75275346 - B4A SINE B4 -1 291 173 4 800 224 312 46 107 chr15 28219628 28219677 -75275297 - B3A SINE B2 -10 122 4 4 800 180 0 0 0 chr15 28220498 28220518 -75274456 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 800 810 313 17 70 chr15 28220535 28220837 -75274137 - B4A SINE B4 0 292 7 4 800 777 219 26 83 chr15 28220977 28221206 -75273768 + B3 SINE B2 1 216 0 4 800 1249 75 0 0 chr15 28221243 28221390 -75273584 + B1_Mus1 SINE Alu 2 148 0 4 800 210 37 0 0 chr15 28221399 28221426 -75273548 + (A)n Simple_repeat Simple_repeat 1 27 0 4 800 250 260 0 0 chr15 28222136 28222186 -75272788 - Lx9 LINE L1 -1736 5908 5859 4 800 652 235 146 5 chr15 28222541 28222746 -75272228 - Lx6 LINE L1 -1 7459 7226 4 800 295 112 62 0 chr15 28222770 28222850 -75272124 + (TA)n Simple_repeat Simple_repeat 2 86 0 4 800 229 275 135 18 chr15 28223045 28223156 -75271818 - MIRc SINE MIR -20 248 125 4 800 1033 223 59 0 chr15 28225311 28225567 -75269407 - B4A SINE B4 -20 272 2 4 800 3816 66 4 20 chr15 28226014 28226524 -75268450 - L1Md_F2 LINE L1 -12 6570 6069 4 800 24 53 0 0 chr15 28226611 28226649 -75268325 + AT_rich Low_complexity Low_complexity 1 38 0 4 800 2776 35 54 14 chr15 28228371 28228721 -75266253 - L1Md_F2 LINE L1 0 6582 6219 4 800 5973 72 1 13 chr15 28229488 28230262 -75264712 - L1_Mus1 LINE L1 -1 6566 5802 4 800 25 0 0 0 chr15 28230359 28230384 -75264590 + AT_rich Low_complexity Low_complexity 1 25 0 4 800 241 68 45 0 chr15 28230566 28230610 -75264364 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 4 800 1173 62 7 0 chr15 28230614 28230759 -75264215 - B1_Mus1 SINE Alu -2 146 1 4 800 1291 112 21 5 chr15 28230878 28231066 -75263908 + B2_Mm2 SINE B2 2 192 -3 4 800 443 282 0 0 chr15 28231120 28231223 -75263751 - PB1D10 SINE Alu -4 113 11 4 800 25 31 0 0 chr15 28233026 28233058 -75261916 + AT_rich Low_complexity Low_complexity 1 32 0 4 800 1827 228 104 38 chr15 28233370 28233927 -75261047 - Lx8 LINE L1 -2 7471 6878 4 800 396 0 0 0 chr15 28235013 28235057 -75259917 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 800 208 167 53 53 chr15 28235069 28235183 -75259791 + (CAAA)n Simple_repeat Simple_repeat 4 117 0 4 800 305 243 0 13 chr15 28235187 28235262 -75259712 + (CCA)n Simple_repeat Simple_repeat 2 75 0 4 800 685 310 57 13 chr15 28235979 28236208 -75258766 - B4 SINE B4 -2 290 52 4 800 31 0 0 0 chr15 28236254 28236285 -75258689 + AT_rich Low_complexity Low_complexity 1 31 0 4 800 315 0 0 0 chr15 28236310 28236345 -75258629 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 800 382 318 28 0 chr15 28236368 28236475 -75258499 - RSINE1 SINE B4 -13 152 43 4 800 296 292 42 0 chr15 28237364 28237436 -75257538 + B1F SINE Alu 39 113 -36 4 800 322 258 58 101 chr15 28237672 28237810 -75257164 - L2c LINE L2 0 3387 3256 4 800 291 298 30 49 chr15 28238242 28238349 -75256625 - MLT1C LTR MaLR -46 421 256 4 800 3120 71 13 2 chr15 28238349 28238745 -75256229 + MTB LTR MaLR 1 400 0 4 800 291 344 45 70 chr15 28238745 28238849 -75256125 - MLT1C LTR MaLR -134 333 227 4 800 468 91 0 0 chr15 28239421 28239487 -75255487 + (TCCC)n Simple_repeat Simple_repeat 4 69 0 4 800 290 270 147 23 chr15 28239490 28239619 -75255355 - B1F SINE Alu 0 149 5 4 800 342 194 0 0 chr15 28241300 28241372 -75253602 + (TA)n Simple_repeat Simple_repeat 2 73 0 4 800 207 0 0 0 chr15 28241876 28241899 -75253075 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 800 203 184 0 0 chr15 28243057 28243095 -75251879 + A-rich Low_complexity Low_complexity 1 38 0 4 800 6821 106 40 22 chr15 28244029 28245095 -75249879 - Lx2 LINE L1 -3 6994 5909 4 800 249 240 24 85 chr15 28245319 28245401 -75249573 + MTEa LTR MaLR 143 219 -160 4 800 218 331 112 80 chr15 28246041 28246606 -75248368 + L2 LINE L2 2301 2883 -536 4 800 220 265 0 20 chr15 28246699 28246731 -75248243 + polypyrimidine Low_complexity Low_complexity 20 51 0 4 800 1065 136 0 0 chr15 28246731 28246908 -75248066 + (TCTCC)n Simple_repeat Simple_repeat 1 177 0 4 800 220 265 0 20 chr15 28246908 28246925 -75248049 + polypyrimidine Low_complexity Low_complexity 3 19 0 4 800 261 83 0 0 chr15 28246928 28246964 -75248010 + (TCCCC)n Simple_repeat Simple_repeat 3 38 0 4 800 1108 261 55 48 chr15 28246970 28247408 -75247566 - Lx5 LINE L1 -35 7015 6575 4 800 1660 104 67 0 chr15 28247580 28247848 -75247126 - Lx2A LINE L1 -5 7003 6718 4 800 348 119 0 0 chr15 28249011 28249070 -75245904 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 800 473 139 23 35 chr15 28249059 28249230 -75245744 + (CAGAGA)n Simple_repeat Simple_repeat 4 172 0 4 800 8296 25 0 8 chr15 28249267 28250204 -75244770 - RLTR13B3 LTR ERVK 0 929 1 4 800 471 349 7 0 chr15 28250610 28250762 -75244212 - Tigger7 DNA MER2_type -7 2484 2332 4 800 412 320 0 0 chr15 28250931 28251150 -75243824 + CT-rich Low_complexity Low_complexity 1 219 0 4 800 465 19 0 0 chr15 28251152 28251206 -75243768 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 800 224 314 33 33 chr15 28251248 28251370 -75243604 - B1F SINE Alu -27 122 1 4 800 2482 170 48 10 chr15 28251843 28252325 -75242649 - RLTR17 LTR ERVK -2 690 191 4 800 186 43 0 0 chr15 28252554 28252577 -75242397 + (T)n Simple_repeat Simple_repeat 1 23 0 4 800 528 302 69 10 chr15 28252702 28252906 -75242068 + B3 SINE B2 1 216 0 4 800 351 225 140 59 chr15 28253325 28253585 -75241389 - L1MA7 LINE L1 -203 6109 5816 4 800 6590 189 62 9 chr15 28253613 28255156 -75239818 - Lx5 LINE L1 -7 7043 5393 4 800 1183 57 0 0 chr15 28255375 28255516 -75239458 + B1_Mm SINE Alu 1 141 -6 4 800 270 0 0 0 chr15 28255518 28255548 -75239426 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 800 534 70 0 0 chr15 28255640 28255711 -75239263 + (TCCC)n Simple_repeat Simple_repeat 2 72 0 4 800 287 250 274 14 chr15 28255731 28255877 -75239097 - L1MA7 LINE L1 -716 5584 5401 4 800 21 0 0 0 chr15 28255981 28256002 -75238972 + AT_rich Low_complexity Low_complexity 1 21 0 4 800 361 341 128 23 chr15 28257752 28258010 -75236964 - Lx8 LINE L1 -7 7466 7182 4 800 660 289 52 62 chr15 28258090 28258381 -75236593 - B4 SINE B4 -4 288 1 4 800 290 335 110 12 chr15 28258736 28258899 -75236075 - MLT1E1A LTR MaLR 0 680 502 4 800 1109 91 12 0 chr15 28259254 28259419 -75235555 - B2_Mm2 SINE B2 -27 168 2 4 800 32 26 0 0 chr15 28259549 28259588 -75235386 + AT_rich Low_complexity Low_complexity 1 39 0 4 800 564 283 197 9 chr15 28259590 28259925 -75235049 - L1MB2 LINE L1 -18 6153 5756 4 800 2044 193 129 15 chr15 28260718 28261175 -75233799 - RMER1B Other Other -3 1063 555 4 800 31 0 0 0 chr15 28261320 28261351 -75233623 + AT_rich Low_complexity Low_complexity 1 31 0 4 800 26 0 0 0 chr15 28261657 28261683 -75233291 + AT_rich Low_complexity Low_complexity 1 26 0 4 800 377 188 74 12 chr15 28261826 28261907 -75233067 + B3 SINE B2 2 87 -129 4 800 1206 68 0 0 chr15 28262249 28262395 -75232579 + B1_Mus1 SINE Alu 2 147 -1 4 800 630 99 0 0 chr15 28262405 28262496 -75232478 + (GGGAGA)n Simple_repeat Simple_repeat 6 96 0 4 800 816 115 0 0 chr15 28263209 28263331 -75231643 + MTB_Mm LTR MaLR 286 407 0 4 800 412 270 27 81 chr15 28264189 28264338 -75230636 + Lx8 LINE L1 6960 7100 -373 4 800 1190 41 7 0 chr15 28264871 28265018 -75229956 - B1_Mus1 SINE Alu 0 148 1 4 800 23 0 0 0 chr15 28267998 28268021 -75226953 + AT_rich Low_complexity Low_complexity 1 23 0 4 800 693 197 6 21 chr15 28268373 28269024 -75225950 + (CA)n Simple_repeat Simple_repeat 1 641 0 4 800 312 48 0 0 chr15 28269024 28269066 -75225908 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 800 1564 142 210 32 chr15 28269141 28269326 -75225648 - RMER17C LTR ERVK 0 410 192 4 800 555 43 0 0 chr15 28269326 28269396 -75225578 + (GA)n Simple_repeat Simple_repeat 2 71 0 4 800 1564 142 210 32 chr15 28269396 28269558 -75225416 - RMER17C LTR ERVK -219 191 1 4 800 452 260 7 0 chr15 28270389 28270535 -75224439 + (TG)n Simple_repeat Simple_repeat 1 147 0 4 800 230 283 0 0 chr15 28270540 28270593 -75224381 - RSINE1 SINE B4 -1 164 112 4 800 25 0 0 0 chr15 28270595 28270620 -75224354 + AT_rich Low_complexity Low_complexity 1 25 0 4 800 182 222 0 43 chr15 28271121 28271168 -75223806 - L3 LINE CR1 -2269 2220 2176 4 800 189 0 0 0 chr15 28272095 28272116 -75222858 + (T)n Simple_repeat Simple_repeat 1 21 0 4 800 192 295 0 25 chr15 28272129 28272209 -75222765 + L2c LINE L2 2292 2369 -1050 4 800 223 251 143 28 chr15 28272816 28272941 -75222033 + L2c LINE L2 3225 3390 -36 4 800 1343 88 5 5 chr15 28274715 28274899 -75220075 - B2_Mm1t SINE B2 -8 185 2 4 800 515 204 117 0 chr15 28275005 28275142 -75219832 + Lx9 LINE L1 7149 7301 -343 4 800 356 317 99 19 chr15 28275179 28275391 -75219583 + MIR SINE MIR 34 262 0 4 800 22 0 0 0 chr15 28275843 28275865 -75219109 + AT_rich Low_complexity Low_complexity 1 22 0 4 800 1753 133 39 0 chr15 28275868 28276153 -75218821 + Lx2A1 LINE L1 6713 7008 0 4 800 331 321 15 8 chr15 28276212 28276344 -75218630 - RSINE1 SINE B4 -28 137 5 4 800 4454 248 24 108 chr15 28276805 28278170 -75216804 - Lx5 LINE L1 0 7050 5801 4 800 710 53 0 10 chr15 28278377 28278473 -75216501 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 4 800 232 281 11 22 chr15 28278495 28278586 -75216388 + (CATATA)n Simple_repeat Simple_repeat 5 94 0 4 800 574 306 0 7 chr15 28278834 28278972 -75216002 - ID_B1 SINE B4 -5 219 83 4 800 572 309 20 25 chr15 28278976 28279172 -75215802 + MTD LTR MaLR 6 200 -219 5 800 575 202 18 0 chr15 28279188 28279302 -75215672 + MTD LTR MaLR 290 405 -14 5 800 301 341 0 11 chr15 28279315 28279404 -75215570 - ID SINE ID -136 88 1 4 800 616 303 89 57 chr15 28279918 28280289 -75214685 - MLT1B LTR MaLR -4 386 4 5 800 976 316 100 32 chr15 28280828 28281390 -75213584 + L1MA4 LINE L1 5065 5684 -616 5 800 417 123 0 0 chr15 28281390 28281455 -75213519 + (CA)n Simple_repeat Simple_repeat 1 65 0 5 800 976 303 107 29 chr15 28281455 28281638 -75213336 + L1MA4 LINE L1 5624 5902 -398 5 800 435 223 0 0 chr15 28281696 28281790 -75213184 - L1M2 LINE L1 -686 5626 5533 5 800 21 0 0 0 chr15 28281964 28281985 -75212989 + AT_rich Low_complexity Low_complexity 1 21 0 5 800 441 275 112 79 chr15 28282607 28282648 -75212326 - B3 SINE B2 -1 197 164 5 800 407 0 63 0 chr15 28282648 28282711 -75212263 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 800 441 261 121 69 chr15 28282711 28282863 -75212111 - B3 SINE B2 -53 163 1 5 800 2089 50 0 4 chr15 28282882 28283124 -75211850 - L1_Mus1 LINE L1 0 6567 6327 5 800 1090 70 0 0 chr15 28283124 28283252 -75211722 - B1_Mm SINE Alu -19 128 1 5 800 31 26 0 0 chr15 28283260 28283298 -75211676 + AT_rich Low_complexity Low_complexity 1 38 0 5 800 387 0 0 0 chr15 28283412 28283455 -75211519 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 800 1723 260 93 13 chr15 28283462 28284094 -75210880 - Lx9 LINE L1 -197 7447 6765 5 800 874 240 79 15 chr15 28284420 28284623 -75210351 + B3 SINE B2 1 216 0 5 800 773 267 84 81 chr15 28284735 28284996 -75209978 - Lx8 LINE L1 -184 7289 7028 5 800 738 98 0 0 chr15 28285068 28285190 -75209784 + (GA)n Simple_repeat Simple_repeat 2 123 0 5 800 321 229 6 79 chr15 28285192 28285439 -75209535 - RMER17A LTR ERVK -416 473 227 5 800 1914 294 74 11 chr15 28285439 28286058 -75208916 - Lx8 LINE L1 -578 6895 6238 5 800 2281 157 180 41 chr15 28286098 28286921 -75208053 - Lx3C LINE L1 0 6976 6040 5 800 228 283 0 0 chr15 28287464 28287570 -75207404 + (CA)n Simple_repeat Simple_repeat 1 106 0 5 800 591 88 68 10 chr15 28288967 28289070 -75205904 - L1_Mus4 LINE L1 -7 6629 6521 5 800 1899 86 0 66 chr15 28289079 28289365 -75205609 + L1_Mus4 LINE L1 6075 6341 -295 5 800 274 154 0 16 chr15 28289691 28289757 -75205217 - PB1D10 SINE Alu 0 149 70 5 800 413 255 78 12 chr15 28291741 28291904 -75203070 - B4 SINE B4 -76 216 9 5 800 263 173 173 0 chr15 28293189 28293264 -75201710 + Lx8 LINE L1 7384 7471 -2 5 800 860 55 0 0 chr15 28293631 28293741 -75201233 - L1Md_F2 LINE L1 -530 5353 5244 5 800 2045 38 8 0 chr15 28293741 28293978 -75200996 + L1Md_F2 LINE L1 5348 5586 -297 5 800 8980 32 1 0 chr15 28293979 28294971 -75200003 + L1Md_F2 LINE L1 5588 6580 -2 5 800 685 292 122 8 chr15 28295603 28295858 -75199116 - B4A SINE B4 -6 286 3 5 800 311 300 69 28 chr15 28296785 28296929 -75198045 - L5 LINE RTE -478 1787 1638 5 800 304 258 14 43 chr15 28297136 28297205 -75197769 - ID4 SINE ID -16 67 1 5 800 27 73 0 0 chr15 28297829 28297884 -75197090 + AT_rich Low_complexity Low_complexity 1 55 0 5 800 925 272 48 11 chr15 28297894 28298303 -75196671 - MTE2a LTR MaLR 0 379 6 5 800 840 78 226 0 chr15 28298665 28298780 -75196194 + B1_Mus2 SINE Alu 1 141 -6 5 800 401 0 20 0 chr15 28298780 28298829 -75196145 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 5 800 444 37 0 0 chr15 28298862 28298916 -75196058 + (CCAA)n Simple_repeat Simple_repeat 2 55 0 5 800 189 0 0 0 chr15 28298916 28298937 -75196037 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 5 800 279 371 44 29 chr15 28301021 28301157 -75193817 + ID_B1 SINE B4 1 138 -86 5 800 449 323 81 7 chr15 28302538 28302809 -75192165 + L1MB3 LINE L1 5875 6165 -18 5 800 873 278 166 24 chr15 28302812 28303144 -75191830 - MTEa LTR MaLR 0 379 1 5 800 21 0 0 0 chr15 28303327 28303348 -75191626 + AT_rich Low_complexity Low_complexity 1 21 0 5 800 1989 86 0 26 chr15 28303848 28304121 -75190853 + L1Md_F2 LINE L1 6305 6570 -12 5 800 312 91 0 0 chr15 28304174 28304218 -75190756 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 5 800 195 129 0 0 chr15 28304579 28304610 -75190364 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 800 724 161 215 5 chr15 28304808 28305008 -75189966 - Lx9 LINE L1 -10 7634 7393 5 800 825 189 0 20 chr15 28305189 28305446 -75189528 + CT-rich Low_complexity Low_complexity 1 251 0 5 800 3418 62 17 12 chr15 28306775 28307180 -75187794 - MTB_Mm LTR MaLR 0 407 1 5 800 502 257 129 35 chr15 28307709 28307995 -75186979 - Lx9 LINE L1 -9 7635 7323 5 800 238 244 90 0 chr15 28308639 28308717 -75186257 - ORR1E LTR MaLR -4 375 291 5 800 234 0 0 0 chr15 28308856 28308882 -75186092 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 800 453 251 11 22 chr15 28308882 28309061 -75185913 + (CAGAGA)n Simple_repeat Simple_repeat 3 179 0 5 800 324 292 42 50 chr15 28309140 28309259 -75185715 - ORR1E LTR MaLR -224 135 18 5 800 379 65 52 52 chr15 28309495 28309592 -75185382 + A-rich Low_complexity Low_complexity 2 98 0 5 800 828 168 0 0 chr15 28309790 28309963 -75185011 + (TG)n Simple_repeat Simple_repeat 1 173 0 5 800 333 0 0 0 chr15 28310191 28310228 -75184746 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 800 186 342 61 9 chr15 28310692 28310807 -75184167 - MIRc SINE MIR -17 251 131 5 800 442 227 67 120 chr15 28311238 28311388 -75183586 - B4A SINE B4 0 292 151 5 12 971 159 22 0 chr15 28311388 28311570 -75183404 - L1_Mur2 LINE L1 -555 5322 5137 5 801 637 225 45 4 chr15 28311896 28312063 -75182911 + MTD LTR MaLR 170 421 0 5 801 980 158 7 7 chr15 28312147 28312294 -75182680 + B1_Mm SINE Alu 1 147 0 5 801 207 234 43 35 chr15 28312295 28312410 -75182564 + A-rich Low_complexity Low_complexity 1 116 0 5 801 219 125 0 0 chr15 28312501 28312541 -75182433 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 801 486 0 0 0 chr15 28312542 28312596 -75182378 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 801 713 95 0 8 chr15 28314417 28314450 -75180524 + (TTC)n Simple_repeat Simple_repeat 3 35 0 5 801 1347 72 0 0 chr15 28314450 28314630 -75180344 + (TCC)n Simple_repeat Simple_repeat 1 180 0 5 801 713 95 0 8 chr15 28314630 28314713 -75180261 + (TTC)n Simple_repeat Simple_repeat 1 83 0 5 801 354 275 12 0 chr15 28316053 28316133 -75178841 + ID4 SINE ID 1 81 -2 5 801 506 233 16 72 chr15 28316666 28316791 -75178183 - PB1D9 SINE Alu 0 120 3 5 801 301 120 26 115 chr15 28316973 28317086 -75177888 + A-rich Low_complexity Low_complexity 3 105 0 5 801 1869 212 63 68 chr15 28317960 28318532 -75176442 - RLTR40 LTR ERVK -5 812 244 5 801 2061 210 29 0 chr15 28318532 28318918 -75176056 + Lx5 LINE L1 6612 7008 -42 5 801 1328 157 36 12 chr15 28318918 28319170 -75175804 - RLTR40 LTR ERVK -540 277 20 5 801 293 169 16 48 chr15 28319192 28319254 -75175720 + MER20 DNA MER1_type 152 211 -8 5 801 228 35 0 0 chr15 28319816 28319845 -75175129 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 801 207 100 0 0 chr15 28320135 28320165 -75174809 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 5 801 287 283 0 0 chr15 28321460 28321520 -75173454 + ID4_ SINE ID 19 78 -5 5 801 399 67 0 19 chr15 28322164 28322217 -75172757 + L1_Mm LINE L1 5541 5608 -570 5 801 8932 35 1 2 chr15 28322217 28323193 -75171781 + L1Md_F2 LINE L1 5588 6564 -18 5 801 510 0 43 0 chr15 28323193 28323263 -75171711 + (TA)n Simple_repeat Simple_repeat 1 73 0 5 801 8932 35 1 2 chr15 28323263 28323281 -75171693 + L1Md_F2 LINE L1 6565 6581 -1 5 801 2701 68 26 15 chr15 28323508 28323850 -75171124 + ORR1A1 LTR MaLR 1 346 0 5 801 534 298 38 38 chr15 28323901 28323933 -75171041 + B3 SINE B2 3 34 -182 5 801 3325 134 127 43 chr15 28323933 28324626 -75170348 + RMER17A LTR ERVK 1 751 0 5 801 534 298 38 38 chr15 28324626 28324750 -75170224 + B3 SINE B2 35 159 -57 5 801 207 100 0 0 chr15 28325645 28325675 -75169299 + (TTC)n Simple_repeat Simple_repeat 2 31 0 5 801 353 261 58 0 chr15 28325811 28325925 -75169049 - Lx8 LINE L1 -376 5936 5816 5 801 591 291 37 47 chr15 28326113 28326304 -75168670 + B3A SINE B2 5 193 -5 5 801 1097 97 21 0 chr15 28326324 28326461 -75168513 + B1_Mus1 SINE Alu 1 140 -8 5 801 266 0 0 29 chr15 28326461 28326496 -75168478 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 801 203 167 0 0 chr15 28326506 28326548 -75168426 + A-rich Low_complexity Low_complexity 1 42 0 5 801 657 97 0 0 chr15 28326548 28326651 -75168323 + (CAAAC)n Simple_repeat Simple_repeat 2 104 0 5 801 695 322 54 22 chr15 28327305 28327468 -75167506 - MER2 DNA MER2_type -32 313 154 5 801 287 309 93 9 chr15 28327468 28327576 -75167398 - PB1D10 SINE Alu 0 117 1 5 801 695 322 54 22 chr15 28327576 28327688 -75167286 - MER2 DNA MER2_type -192 153 29 5 801 1516 159 139 16 chr15 28328117 28328517 -75166457 - RMER17C LTR ERVK -531 427 16 5 801 379 317 81 60 chr15 28328939 28329369 -75165605 - L1M5 LINE L1 -406 5767 5329 5 801 2025 208 89 14 chr15 28329388 28329871 -75165103 - Lx9 LINE L1 -1 7643 7125 5 801 674 210 149 11 chr15 28329899 28330087 -75164887 - B3 SINE B2 -1 215 2 5 801 575 264 71 26 chr15 28330122 28330348 -75164626 - L1M5 LINE L1 -907 5239 5004 5 801 337 55 36 18 chr15 28331358 28331414 -75163560 + (CAAA)n Simple_repeat Simple_repeat 4 60 0 5 801 23 33 0 0 chr15 28332835 28332865 -75162109 + AT_rich Low_complexity Low_complexity 1 30 0 5 801 234 128 0 0 chr15 28333829 28333868 -75161106 + (TC)n Simple_repeat Simple_repeat 2 40 0 5 801 462 36 0 0 chr15 28333868 28333924 -75161050 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 801 476 353 54 17 chr15 28334066 28334305 -75160669 + Arthur1C DNA Tip100 4 251 -112 5 801 5696 83 36 26 chr15 28335433 28336273 -75158701 - L1_Mus3 LINE L1 0 6638 5791 5 801 1891 88 0 0 chr15 28336273 28336535 -75158439 + L1_Mus3 LINE L1 5456 5717 -166 5 801 22 0 0 0 chr15 28336623 28336645 -75158329 + AT_rich Low_complexity Low_complexity 1 22 0 5 801 195 42 0 0 chr15 28336926 28336950 -75158024 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 801 253 286 43 0 chr15 28337351 28337421 -75157553 + ID4_ SINE ID 1 73 -10 5 801 247 65 21 21 chr15 28337854 28337901 -75157073 + (TTTG)n Simple_repeat Simple_repeat 1 47 0 5 801 569 318 109 20 chr15 28339936 28340238 -75154736 + LTR52 LTR ERVL 1 329 -92 6 801 4046 147 33 13 chr15 28340349 28341047 -75153927 - Lx2B LINE L1 0 7000 6289 6 801 869 204 22 28 chr15 28341871 28342052 -75152922 - B3 SINE B2 -7 209 30 6 801 282 319 25 58 chr15 28342044 28342164 -75152810 - B4A SINE B4 -53 239 124 6 801 382 336 101 0 chr15 28342191 28342310 -75152664 - B4A SINE B4 -159 133 3 6 801 617 316 27 54 chr15 28342559 28342780 -75152194 - B3 SINE B2 -1 215 1 6 801 310 372 21 0 chr15 28342874 28342968 -75152006 + RSINE1 SINE B4 53 148 -17 6 801 972 322 31 36 chr15 28343037 28343456 -75151518 - MTD LTR MaLR -2 417 1 6 801 3151 52 14 47 chr15 28344398 28344825 -75150149 + L1_Mus2 LINE L1 6154 6566 0 6 801 21 0 0 0 chr15 28345075 28345096 -75149878 + AT_rich Low_complexity Low_complexity 1 21 0 6 801 488 68 14 0 chr15 28345191 28345264 -75149710 + (TG)n Simple_repeat Simple_repeat 1 74 0 6 801 744 283 91 25 chr15 28345264 28345498 -75149476 - B4 SINE B4 -32 260 8 6 801 687 75 0 0 chr15 28345877 28345971 -75149003 + (TCCA)n Simple_repeat Simple_repeat 4 97 0 6 801 243 312 22 111 chr15 28346651 28346709 -75148265 - L2 LINE L2 -791 2628 2571 6 801 374 301 43 50 chr15 28346709 28346870 -75148104 + RSINE1 SINE B4 2 161 -4 6 801 243 312 22 111 chr15 28346870 28346991 -75147983 - L2 LINE L2 -849 2570 2465 6 801 214 129 62 31 chr15 28347208 28347242 -75147732 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 6 801 519 17 0 0 chr15 28347242 28347302 -75147672 + (TATG)n Simple_repeat Simple_repeat 3 62 0 6 801 214 129 62 31 chr15 28347302 28347363 -75147611 + (TCTA)n Simple_repeat Simple_repeat 2 63 0 6 801 302 275 0 59 chr15 28347366 28347451 -75147523 - ID SINE ID -141 83 4 6 801 37 0 0 0 chr15 28348357 28348394 -75146580 + AT_rich Low_complexity Low_complexity 1 37 0 6 801 1089 265 108 37 chr15 28348400 28348862 -75146112 - Lx8 LINE L1 -5 7468 6974 6 801 661 268 57 0 chr15 28348870 28349064 -75145910 - ID_B1 SINE B4 -19 205 1 6 801 500 229 24 4 chr15 28349112 28349243 -75145731 - PB1D10 SINE Alu -3 144 8 6 801 1050 274 21 18 chr15 28351896 28352182 -75142792 - MTE2b LTR MaLR -35 344 58 6 801 2772 47 18 3 chr15 28352182 28352523 -75142451 - ORR1A1 LTR MaLR 0 346 1 6 801 572 82 0 10 chr15 28352657 28352755 -75142219 - L1_Mus3 LINE L1 -2 6636 6540 6 801 1489 120 30 4 chr15 28353102 28353337 -75141637 - Lx4A LINE L1 -319 6739 6499 6 801 407 159 94 21 chr15 28353322 28353418 -75141556 - L1_Mur2 LINE L1 -6592 120 18 6 801 180 0 0 0 chr15 28353504 28353524 -75141450 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 801 396 0 0 0 chr15 28353831 28353875 -75141099 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 801 1406 224 57 7 chr15 28354074 28354371 -75140603 - MTC LTR MaLR -49 372 61 6 801 354 308 105 0 chr15 28354508 28354641 -75140333 - Lx8 LINE L1 -133 7340 7194 6 801 23114 85 19 4 chr15 28354770 28358767 -75136207 + L1Md_F2 LINE L1 559 4616 -1267 6 801 7631 57 3 0 chr15 28358779 28360250 -75134724 - L1Md_F2 LINE L1 0 6582 5107 6 801 11276 75 1 0 chr15 28360233 28361821 -75133153 - L1Md_F2 LINE L1 -593 5290 3701 6 801 6767 97 0 0 chr15 28361821 28362800 -75132174 + L1Md_F2 LINE L1 4608 5586 -297 6 801 6904 93 24 19 chr15 28362800 28363790 -75131184 + L1Md_F2 LINE L1 5587 6581 -1 6 801 431 320 0 57 chr15 28363807 28363966 -75131008 + MLT1A0 LTR MaLR 214 363 -2 6 801 840 236 46 66 chr15 28364766 28365116 -75129858 - RLTR15 LTR ERVK -16 343 1 6 801 205 329 103 41 chr15 28367407 28367553 -75127421 - MIRm SINE MIR 0 276 122 6 801 533 306 60 5 chr15 28370583 28370767 -75124207 + MER58B DNA MER1_type 121 314 -27 6 801 7035 61 9 0 chr15 28371248 28372133 -75122841 - RLTR13B1 LTR ERVK 0 893 1 6 801 228 135 0 0 chr15 28373301 28373338 -75121636 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 801 1247 117 16 26 chr15 28375020 28375213 -75119761 + B2_Mm2 SINE B2 2 192 -3 6 801 189 171 0 0 chr15 28375601 28375636 -75119338 + (TAA)n Simple_repeat Simple_repeat 1 35 0 6 801 8068 60 7 14 chr15 28375833 28377647 -75117327 - L1Md_F2 LINE L1 0 6582 4779 6 801 22 35 0 0 chr15 28377662 28377691 -75117283 + AT_rich Low_complexity Low_complexity 1 29 0 6 801 271 294 29 14 chr15 28378557 28378626 -75116348 + B3A SINE B2 101 170 -28 6 801 26 0 0 0 chr15 28378786 28378812 -75116162 + AT_rich Low_complexity Low_complexity 1 26 0 6 801 252 86 0 0 chr15 28379195 28379230 -75115744 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 6 801 1099 98 0 0 chr15 28379232 28379375 -75115599 - B1_Mus1 SINE Alu -4 144 2 6 801 390 271 121 7 chr15 28379809 28379950 -75115024 - MER20 DNA MER1_type -62 157 1 6 801 390 42 0 0 chr15 28381005 28381053 -75113921 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 6 801 314 129 16 0 chr15 28381544 28381606 -75113368 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 801 492 209 21 29 chr15 28381656 28381841 -75113133 - RMER1B Other Other -14 1052 919 6 801 198 0 0 0 chr15 28382395 28382417 -75112557 + (T)n Simple_repeat Simple_repeat 1 22 0 6 801 415 293 64 8 chr15 28383294 28383419 -75111555 - B3A SINE B2 -10 206 76 6 801 463 209 8 4 chr15 28383902 28384013 -75110961 - B3A SINE B2 -76 119 7 6 801 22 0 0 0 chr15 28384015 28384037 -75110937 + AT_rich Low_complexity Low_complexity 1 22 0 6 801 2595 305 72 25 chr15 28384037 28385268 -75109706 - Lx9 LINE L1 -15 7629 6341 6 801 538 297 129 35 chr15 28386641 28386843 -75108131 + B4A SINE B4 31 251 -41 6 801 441 0 0 0 chr15 28386901 28386950 -75108024 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 801 240 35 0 0 chr15 28389527 28389556 -75105418 + (TTAA)n Simple_repeat Simple_repeat 4 32 0 6 801 423 0 0 0 chr15 28390089 28390136 -75104838 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 801 249 277 14 58 chr15 28390142 28390211 -75104763 - PB1D10 SINE Alu -16 101 36 6 801 507 279 144 11 chr15 28390278 28390459 -75104515 - B3 SINE B2 -11 205 1 6 801 183 346 80 14 chr15 28390527 28390665 -75104309 - L2c LINE L2 -57 3330 3184 6 801 2640 94 0 0 chr15 28390725 28391099 -75103875 - L1_Mus1 LINE L1 -136 6431 6058 6 801 792 68 28 57 chr15 28391099 28391240 -75103734 + L1Md_F2 LINE L1 6446 6582 0 6 801 1039 141 126 0 chr15 28391414 28391612 -75103362 - Lx2 LINE L1 0 6997 6775 6 801 3171 85 2 2 chr15 28391610 28392068 -75102906 - Lx2 LINE L1 -352 6645 6188 6 801 535 350 0 28 chr15 28392175 28392357 -75102617 - MER82 DNA MER2_type -78 575 399 6 801 255 189 56 19 chr15 28392360 28392468 -75102506 + (TA)n Simple_repeat Simple_repeat 1 112 0 6 801 900 328 47 24 chr15 28392472 28392853 -75102121 - MER82 DNA MER2_type -263 390 1 6 801 312 27 0 0 chr15 28393202 28393239 -75101735 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 801 742 274 94 76 chr15 28393319 28393418 -75101556 - ORR1E LTR MaLR -74 285 176 6 801 1116 49 0 0 chr15 28393418 28393561 -75101413 + (GA)n Simple_repeat Simple_repeat 1 143 0 6 801 742 274 94 76 chr15 28393561 28393737 -75101237 - ORR1E LTR MaLR -184 175 6 6 801 281 333 20 119 chr15 28393889 28394090 -75100884 - LTR86A2 LTR ERVL -225 283 103 6 801 575 159 9 0 chr15 28394301 28394414 -75100560 + GA-rich Low_complexity Low_complexity 3 116 0 6 801 22 0 0 0 chr15 28395121 28395143 -75099831 + AT_rich Low_complexity Low_complexity 1 22 0 6 801 473 379 4 0 chr15 28396228 28396583 -75098391 + (TG)n Simple_repeat Simple_repeat 1 356 0 6 801 181 227 23 0 chr15 28396639 28396683 -75098291 - MIRc SINE MIR -53 215 171 6 801 186 405 26 26 chr15 28396930 28397044 -75097930 + MIR SINE MIR 26 139 -69 6 801 897 163 3 3 chr15 28397974 28398306 -75096668 + (CA)n Simple_repeat Simple_repeat 1 332 0 6 801 240 35 0 0 chr15 28398719 28398748 -75096226 + (TATAA)n Simple_repeat Simple_repeat 5 33 0 6 801 1923 259 41 54 chr15 28402246 28402801 -75092173 + ORR1D1-int LTR MaLR 154 701 -669 6 801 430 166 63 2 chr15 28403303 28403392 -75091582 + ORR1D1 LTR MaLR 289 420 -1 6 801 1315 249 71 15 chr15 28403496 28403891 -75091083 + MTD LTR MaLR 3 419 0 6 801 463 271 104 20 chr15 28406402 28406631 -75088343 + L1VL2 LINE L1 207 437 -5981 6 801 395 232 31 16 chr15 28406682 28406809 -75088165 + L1Md_F LINE L1 578 706 -5813 6 801 531 196 20 0 chr15 28406817 28406919 -75088055 + L1Md_F LINE L1 628 731 -5788 6 801 908 98 0 29 chr15 28406922 28407059 -75087915 + B1_Mm SINE Alu 3 135 -12 6 801 4086 47 1 0 chr15 28407059 28407748 -75087226 - L1Md_F2 LINE L1 -542 6040 5351 6 801 4224 53 0 6 chr15 28407748 28408277 -75086697 + L1Md_F2 LINE L1 6045 6570 -12 6 801 27 0 0 0 chr15 28408285 28408312 -75086662 + AT_rich Low_complexity Low_complexity 1 27 0 6 801 211 0 28 56 chr15 28408326 28408362 -75086612 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 6 801 2051 144 8 96 chr15 28408365 28408834 -75086140 + L1VL4 LINE L1 509 936 -5366 6 801 244 178 22 0 chr15 28410214 28410259 -75084715 - BLACKJACK DNA AcHobo -2668 276 231 6 801 379 248 82 9 chr15 28410260 28410370 -75084604 + PB1D9 SINE Alu 1 118 -2 6 801 1823 249 66 4 chr15 28410442 28410942 -75084032 - MT2A LTR ERVL 0 533 3 6 801 608 340 115 4 chr15 28411565 28411825 -75083149 + MLT1A0 LTR MaLR 77 365 0 6 801 198 0 0 0 chr15 28411941 28411963 -75083011 + (T)n Simple_repeat Simple_repeat 1 22 0 6 801 351 279 0 0 chr15 28412180 28412248 -75082726 + MT2A LTR ERVL 71 138 -395 6 801 3815 90 9 7 chr15 28413374 28413913 -75081061 + L1_Mus4 LINE L1 6094 6633 -3 6 801 395 49 23 0 chr15 28415135 28415200 -75079774 + B1_Mm SINE Alu 49 146 -3 6 801 219 36 0 0 chr15 28415201 28415229 -75079745 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 6 801 465 270 61 51 chr15 28415374 28415686 -75079288 + L1M2 LINE L1 4414 4756 -1387 6 801 337 264 0 42 chr15 28415746 28415841 -75079133 + L1M2 LINE L1 5109 5199 -944 6 801 818 238 149 49 chr15 28415889 28416317 -75078657 + L1M2 LINE L1 5352 5822 -478 6 801 756 286 26 0 chr15 28416734 28416926 -75078048 + B3A SINE B2 1 197 -1 6 801 1486 95 22 0 chr15 28416928 28417150 -75077824 + Lx3B LINE L1 6541 6767 -206 6 801 295 319 80 49 chr15 28417347 28417571 -75077403 - MLT1D LTR MaLR -263 242 12 7 801 506 133 33 11 chr15 28418059 28418150 -75076824 + RLTR13C1 LTR ERVK 891 983 0 7 801 188 238 0 0 chr15 28418724 28418766 -75076208 - MIR SINE MIR -83 179 138 7 801 253 358 118 31 chr15 28420166 28420394 -75074580 - LTR85c LTR Gypsy? -160 663 416 7 801 240 283 9 26 chr15 28420567 28420683 -75074291 - L1M4b LINE L1 -5492 1842 1729 7 801 1002 275 10 13 chr15 28421590 28421892 -75073082 + Lx8 LINE L1 7034 7334 -139 7 801 792 317 28 68 chr15 28421970 28422363 -75072611 + MLT1C LTR MaLR 83 464 -3 7 801 23 0 0 0 chr15 28422555 28422578 -75072396 + AT_rich Low_complexity Low_complexity 1 23 0 7 801 2231 116 25 6 chr15 28422585 28422906 -75072068 + ORR1A2 LTR MaLR 1 327 0 7 801 2589 149 73 28 chr15 28423525 28423593 -75071381 - RLTR11A LTR ERVK 0 528 460 7 801 351 0 0 0 chr15 28423593 28423632 -75071342 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 801 2589 157 70 32 chr15 28423632 28424055 -75070919 - RLTR11A LTR ERVK -69 459 15 7 801 310 279 0 103 chr15 28424098 28424214 -75070760 - L1M4b LINE L1 -6545 789 686 7 801 340 298 117 37 chr15 28424323 28424511 -75070463 - L1M4b LINE L1 -7071 263 61 7 801 189 328 63 32 chr15 28424856 28424982 -75069992 - L2c LINE L2 -65 3322 3193 7 801 925 195 128 20 chr15 28425263 28425467 -75069507 + URR1A DNA MER1_type 1 226 0 7 801 4812 161 28 45 chr15 28425753 28426677 -75068297 + RMER13B LTR ERVK 1 908 0 7 801 21 36 0 0 chr15 28426684 28426712 -75068262 + AT_rich Low_complexity Low_complexity 1 28 0 7 801 672 243 138 0 chr15 28427187 28427376 -75067598 + B3 SINE B2 2 216 0 7 801 234 237 258 0 chr15 28428969 28429062 -75065912 + MIRb SINE MIR 77 193 -75 7 801 235 293 19 75 chr15 28429513 28429620 -75065354 - ID2 SINE ID -51 101 1 7 801 26 50 0 0 chr15 28430719 28430759 -75064215 + AT_rich Low_complexity Low_complexity 1 40 0 7 801 2965 268 19 26 chr15 28430846 28431643 -75063331 + Lx5 LINE L1 6225 7015 -35 7 801 518 41 14 0 chr15 28431733 28431806 -75063168 + (TCTA)n Simple_repeat Simple_repeat 2 75 0 7 801 333 0 0 0 chr15 28431821 28431858 -75063116 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 801 297 0 0 0 chr15 28431858 28431890 -75063084 + (GA)n Simple_repeat Simple_repeat 2 34 0 7 801 391 306 78 101 chr15 28433812 28434083 -75060891 + MTEb LTR MaLR 1 271 -108 7 801 264 141 6 17 chr15 28434109 28434171 -75060803 + MTEb LTR MaLR 269 328 -51 7 801 861 84 0 0 chr15 28434182 28434301 -75060673 + (TTC)n Simple_repeat Simple_repeat 1 119 0 7 801 202 214 0 23 chr15 28434301 28434337 -75060637 + polypyrimidine Low_complexity Low_complexity 1 36 0 7 801 369 0 0 0 chr15 28434361 28434402 -75060572 + (CAA)n Simple_repeat Simple_repeat 2 42 0 7 801 23 0 0 0 chr15 28435152 28435175 -75059799 + AT_rich Low_complexity Low_complexity 1 23 0 7 801 207 139 0 0 chr15 28435306 28435342 -75059632 + (TCC)n Simple_repeat Simple_repeat 2 37 0 7 801 356 38 0 36 chr15 28435342 28435397 -75059577 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 7 801 1661 279 18 41 chr15 28435490 28436219 -75058755 - Lx6 LINE L1 -26 7434 6455 7 801 1519 94 9 9 chr15 28437569 28437795 -75057179 - L1_Mus3 LINE L1 0 6638 6413 7 801 2029 52 0 0 chr15 28437805 28438055 -75056919 - L1Md_T LINE L1 -2 6580 6331 7 801 807 178 0 0 chr15 28438895 28439069 -75055905 + CT-rich Low_complexity Low_complexity 2 175 0 7 801 254 359 52 62 chr15 28439217 28439428 -75055546 - MIR SINE MIR -32 230 22 7 801 918 130 0 0 chr15 28439946 28440123 -75054851 + (CA)n Simple_repeat Simple_repeat 2 178 0 7 801 265 315 177 38 chr15 28440411 28440620 -75054354 + MIRb SINE MIR 20 256 -6 7 801 22 56 0 0 chr15 28440622 28440658 -75054316 + AT_rich Low_complexity Low_complexity 1 36 0 7 801 251 28 28 0 chr15 28440749 28440785 -75054189 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 7 801 441 95 0 0 chr15 28440940 28441003 -75053971 + (TTCA)n Simple_repeat Simple_repeat 1 63 0 7 801 222 316 84 42 chr15 28441037 28441156 -75053818 - L2c LINE L2 -33 3354 3231 7 801 252 311 86 19 chr15 28441466 28441571 -75053403 + MIRb SINE MIR 24 135 -133 7 801 189 121 0 0 chr15 28441621 28441654 -75053320 + (TTTTG)n Simple_repeat Simple_repeat 5 37 0 7 801 376 252 28 0 chr15 28441916 28442023 -75052951 + Lx9 LINE L1 7329 7438 -206 7 100 4881 106 15 15 chr15 28442168 28442893 -75052081 - Lx3A LINE L1 -3 6978 6254 7 802 381 80 0 0 chr15 28442894 28442944 -75052030 - B2_Mm2 SINE B2 -144 51 2 7 802 203 220 10 62 chr15 28442944 28443041 -75051933 + (TATAA)n Simple_repeat Simple_repeat 3 94 0 7 802 795 351 76 28 chr15 28443060 28443453 -75051521 + MLT2B1 LTR ERVL 65 480 -40 7 802 573 15 0 0 chr15 28443453 28443519 -75051455 + (TC)n Simple_repeat Simple_repeat 1 66 0 7 802 504 0 0 0 chr15 28443519 28443575 -75051399 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 802 795 351 76 28 chr15 28443575 28443613 -75051361 + MLT2B1 LTR ERVL 481 517 -3 7 802 253 325 22 20 chr15 28443671 28443780 -75051194 - MIRb SINE MIR -121 155 47 7 802 1100 215 9 0 chr15 28443978 28444201 -75050773 - URR1A DNA MER1_type -1 225 1 7 802 600 40 0 0 chr15 28444567 28444642 -75050332 + (CA)n Simple_repeat Simple_repeat 2 76 0 7 802 198 0 0 0 chr15 28445591 28445613 -75049361 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 802 180 0 0 0 chr15 28445977 28445997 -75048977 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 802 681 315 5 77 chr15 28447755 28447975 -75046999 + RMER15 LTR ERVL 187 390 -185 7 802 4704 58 0 0 chr15 28448502 28449087 -75045887 - L1Md_F3 LINE L1 -14 6570 5986 7 802 568 259 102 40 chr15 28450994 28451219 -75043755 + MLT1A0 LTR MaLR 5 243 -122 7 802 587 181 0 32 chr15 28452172 28452326 -75042648 + CT-rich Low_complexity Low_complexity 2 150 0 7 802 23 0 0 29 chr15 28452933 28452953 -75042021 + AT_rich Low_complexity Low_complexity 1 20 0 7 802 1138 117 58 0 chr15 28452953 28453141 -75041833 - Lx3_Mus LINE L1 -8 7001 6803 7 802 23 0 0 29 chr15 28453141 28453154 -75041820 + AT_rich Low_complexity Low_complexity 1 13 0 7 802 380 317 85 74 chr15 28453479 28454062 -75040912 + LTR48 LTR ERV1 1 783 -4 7 802 25 31 0 0 chr15 28455487 28455519 -75039455 + AT_rich Low_complexity Low_complexity 1 32 0 7 802 652 250 7 0 chr15 28455526 28455662 -75039312 - B1_Mur1 SINE Alu -9 140 4 7 802 324 296 50 124 chr15 28455662 28455727 -75039247 - B4 SINE B4 -75 217 32 7 802 21 0 0 0 chr15 28456319 28456340 -75038634 + AT_rich Low_complexity Low_complexity 1 21 0 7 802 1183 61 0 0 chr15 28456371 28456518 -75038456 - B1_Mm SINE Alu 0 147 1 7 802 735 181 23 8 chr15 28457298 28457426 -75037548 + ORR1B1 LTR MaLR 47 176 -218 7 802 2696 41 3 0 chr15 28457429 28457771 -75037203 + L1Md_F2 LINE L1 5244 5586 -297 7 802 8137 38 2 17 chr15 28457772 28458782 -75036192 + L1Md_F2 LINE L1 5588 6582 0 7 802 1422 144 4 21 chr15 28458788 28459029 -75035945 + ORR1A4 LTR MaLR 93 329 0 7 802 1351 292 9 10 chr15 28459072 28459542 -75035432 - Lx8 LINE L1 -597 7099 6626 7 802 384 290 83 0 chr15 28460413 28460558 -75034416 + MLT1A0 LTR MaLR 5 161 -204 7 802 314 337 39 51 chr15 28460668 28460846 -75034128 + MLT1A0 LTR MaLR 226 401 -7 7 802 34 0 0 0 chr15 28461262 28461296 -75033678 + AT_rich Low_complexity Low_complexity 1 34 0 7 802 1613 36 0 10 chr15 28461832 28462026 -75032948 + B2_Mm1a SINE B2 2 193 0 7 802 321 311 114 12 chr15 28462132 28462298 -75032676 - MLT1A0 LTR MaLR -171 194 12 7 802 531 289 88 10 chr15 28462600 28462998 -75031976 - L1MC3 LINE L1 -43 7742 7314 7 802 1183 213 50 53 chr15 28463291 28463613 -75031361 - Lx6 LINE L1 -9 7451 7131 7 802 5191 82 11 107 chr15 28463619 28464573 -75030401 + RMER17D LTR ERVK 26 887 -2 7 802 493 206 37 0 chr15 28464573 28464680 -75030294 - Lx6 LINE L1 -315 7145 7035 7 802 225 207 133 33 chr15 28466248 28466338 -75028636 - Lx6 LINE L1 -26 7434 7336 7 802 429 54 0 0 chr15 28467975 28468031 -75026943 + (TG)n Simple_repeat Simple_repeat 1 56 0 7 802 383 263 79 20 chr15 28468053 28468154 -75026820 - RSINE1 SINE B4 -57 108 2 7 802 210 37 0 0 chr15 28468510 28468537 -75026437 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 802 277 173 0 0 chr15 28468553 28468605 -75026369 + L1_Mus4 LINE L1 5535 5586 -297 7 802 8622 26 0 0 chr15 28468605 28469601 -75025373 + L1Md_A LINE L1 5587 6582 0 7 802 546 70 11 34 chr15 28470214 28470233 -75024741 + L1_Mus4 LINE L1 5690 5707 -929 7 802 4639 143 56 11 chr15 28470233 28471016 -75023958 - Lx LINE L1 -4 6650 5833 7 802 546 70 11 34 chr15 28471016 28471085 -75023889 + L1_Mus4 LINE L1 5708 5776 -860 7 802 306 71 0 0 chr15 28471107 28471149 -75023825 - Lx LINE L1 -780 5874 5833 7 802 944 63 9 9 chr15 28471148 28471298 -75023676 + Lx2 LINE L1 5707 5893 -404 7 802 688 289 136 10 chr15 28471496 28472017 -75022957 - L1M2 LINE L1 -987 5156 4570 7 802 1102 262 12 8 chr15 28472081 28472327 -75022647 - ORR1E LTR MaLR -112 247 1 7 802 516 32 0 0 chr15 28472652 28472714 -75022260 + (TCCA)n Simple_repeat Simple_repeat 3 64 0 7 802 560 299 8 0 chr15 28472793 28472920 -75022054 + RSINE1 SINE B4 2 129 -36 7 802 1001 16 8 0 chr15 28474306 28474429 -75020545 + (TCTA)n Simple_repeat Simple_repeat 1 124 0 7 802 191 114 0 28 chr15 28476536 28476572 -75018402 + (GGAA)n Simple_repeat Simple_repeat 2 36 0 7 802 24 0 0 0 chr15 28476801 28476825 -75018149 + AT_rich Low_complexity Low_complexity 1 24 0 7 802 543 344 44 9 chr15 28478168 28478394 -75016580 + MTD LTR MaLR 41 274 -145 7 802 14183 171 25 132 chr15 28479038 28485583 -75009391 + L1_Mus1 LINE L1 833 6567 0 7 802 12627 153 21 11 chr15 28485613 28485700 -75009274 + Lx4B LINE L1 3472 3558 -2319 7 802 1823 39 0 13 chr15 28485700 28485934 -75009040 + L1Md_F3 LINE L1 6352 6582 -2 7 802 12627 153 21 11 chr15 28485934 28486985 -75007989 + Lx4B LINE L1 3559 4620 -1257 7 802 230 56 0 27 chr15 28486985 28487022 -75007952 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 7 802 12627 161 19 8 chr15 28487022 28489001 -75005973 + Lx4B LINE L1 4621 6633 -425 7 802 367 228 146 19 chr15 28489081 28489184 -75005790 + MTD LTR MaLR 1 116 -303 8 802 202 116 22 44 chr15 28489469 28489514 -75005460 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 8 802 262 302 71 162 chr15 28489630 28489784 -75005190 + RSINE1 SINE B4 5 144 -21 8 802 305 283 111 0 chr15 28490365 28490464 -75004510 - Lx5 LINE L1 -794 6256 6147 8 802 1620 267 51 10 chr15 28490478 28491282 -75003692 + Lx5 LINE L1 6262 7008 -42 8 802 441 95 0 0 chr15 28491300 28491363 -75003611 + (TG)n Simple_repeat Simple_repeat 2 64 0 8 802 239 325 62 91 chr15 28492591 28492767 -75002207 + MLT2B3 LTR ERVL 192 362 -192 8 802 228 263 40 0 chr15 28492867 28492943 -75002031 - Charlie7 DNA MER1_type -63 2549 2471 8 802 349 67 50 0 chr15 28492978 28493038 -75001936 + (TCTA)n Simple_repeat Simple_repeat 1 63 0 8 802 1105 108 11 0 chr15 28493038 28493214 -75001760 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 8 802 1403 196 48 24 chr15 28493507 28493799 -75001175 - MTC LTR MaLR 0 421 123 8 802 668 207 27 0 chr15 28493799 28493949 -75001025 - L1_Mur2 LINE L1 -998 4879 4726 8 802 36826 38 3 1 chr15 28493945 28499866 -74995108 - L1Md_A LINE L1 -1 6584 563 8 802 440 125 0 0 chr15 28499859 28499931 -74995043 - L1Md_F LINE L1 -6282 237 166 8 802 266 137 20 0 chr15 28499923 28499974 -74995000 - L1Md_A LINE L1 -6078 541 490 8 802 1802 164 27 22 chr15 28500003 28500370 -74994604 - L1_Mur2 LINE L1 -1157 4720 4352 1 802 4451 161 47 37 chr15 28500378 28500745 -74994229 - L1_Mur2 LINE L1 -2009 3868 3472 1 802 405 0 0 0 chr15 28500745 28500790 -74994184 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 802 4451 161 47 37 chr15 28500790 28501132 -74993842 - L1_Mur2 LINE L1 -2406 3471 3123 1 802 1113 116 43 27 chr15 28501132 28501318 -74993656 - B2_Mm2 SINE B2 -4 191 3 3 802 4451 161 47 37 chr15 28501318 28501575 -74993399 - L1_Mur2 LINE L1 -2755 3122 2894 1 802 6435 206 18 17 chr15 28501575 28502987 -74991987 + Lx5 LINE L1 4915 6339 -711 4 802 265 24 48 0 chr15 28502987 28503029 -74991945 + (CAA)n Simple_repeat Simple_repeat 2 45 0 5 802 6435 223 19 43 chr15 28503029 28503708 -74991266 + Lx5 LINE L1 6340 7005 -45 4 802 426 20 0 0 chr15 28503708 28503759 -74991215 + (GA)n Simple_repeat Simple_repeat 1 51 0 6 802 6435 223 19 43 chr15 28503759 28503815 -74991159 + Lx5 LINE L1 7006 7045 -5 4 802 472 197 20 12 chr15 28503827 28503935 -74991039 - MTC LTR MaLR -298 109 3 7 802 296 64 0 21 chr15 28504275 28504323 -74990651 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 8 802 304 276 131 25 chr15 28504893 28505053 -74989921 - HAL1-3A_ME LINE L1 -411 2447 2271 9 802 21 57 0 0 chr15 28505896 28505931 -74989043 + AT_rich Low_complexity Low_complexity 1 35 0 1 802 798 286 10 0 chr15 28505944 28506143 -74988831 + B3 SINE B2 1 201 -15 1 802 183 80 0 0 chr15 28506292 28506317 -74988657 + (T)n Simple_repeat Simple_repeat 1 25 0 1 802 3218 58 2 0 chr15 28506810 28507205 -74987769 + MTA_Mm LTR MaLR 1 396 0 1 802 33935 71 1 2 chr15 28507210 28509255 -74985719 - L1Md_F2 LINE L1 -606 5976 3933 1 802 6858 42 29 1 chr15 28509255 28510087 -74984887 + RLTR13A LTR ERVK 1 855 0 1 802 33935 90 16 2 chr15 28510087 28513608 -74981366 - L1Md_F2 LINE L1 -1951 3932 363 1 802 220 136 0 64 chr15 28513652 28513699 -74981275 + T-rich Low_complexity Low_complexity 4 47 0 1 802 2897 83 0 0 chr15 28513719 28514104 -74980870 + L1_Mus1 LINE L1 6183 6567 0 1 802 2335 176 36 7 chr15 28514295 28514735 -74980239 + RLTR11B LTR ERVK 1 453 0 1 802 1116 248 96 26 chr15 28514738 28515082 -74979892 + ORR1D2 LTR MaLR 1 368 -2 1 802 194 91 0 29 chr15 28516050 28516057 -74978917 + (TC)n Simple_repeat Simple_repeat 2 8 0 2 802 816 11 0 0 chr15 28516057 28516150 -74978824 + (TTCCC)n Simple_repeat Simple_repeat 5 97 0 2 802 194 91 0 29 chr15 28516150 28516176 -74978798 + (TC)n Simple_repeat Simple_repeat 2 27 0 2 802 837 156 96 0 chr15 28516178 28516345 -74978629 - Lx LINE L1 -6 6648 6466 2 802 1019 123 0 0 chr15 28516708 28516854 -74978120 - B1_Mm SINE Alu -1 146 1 2 802 486 0 0 0 chr15 28517020 28517074 -74977900 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 2 802 240 338 0 0 chr15 28517750 28517827 -74977147 - L2a LINE L2 0 3426 3350 2 802 21 0 0 0 chr15 28520309 28520330 -74974644 + AT_rich Low_complexity Low_complexity 1 21 0 2 802 289 208 46 77 chr15 28520331 28520461 -74974513 - Lx9 LINE L1 -2 7642 7517 2 802 428 35 17 0 chr15 28520466 28520524 -74974450 + (CA)n Simple_repeat Simple_repeat 1 59 0 2 802 1245 44 6 0 chr15 28520873 28521031 -74973943 - L1_Mm LINE L1 -1436 4447 4289 3 802 4043 37 24 0 chr15 28521031 28521522 -74973452 + L1Md_F3 LINE L1 6068 6570 -14 3 802 283 383 77 81 chr15 28523987 28524225 -74970749 + B4A SINE B4 33 270 -22 3 802 528 59 0 0 chr15 28524225 28524293 -74970681 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 802 283 383 77 81 chr15 28524293 28524315 -74970659 + B4A SINE B4 271 292 0 3 802 315 49 0 0 chr15 28524929 28524970 -74970004 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 802 561 211 0 0 chr15 28525385 28525508 -74969466 + (CATATA)n Simple_repeat Simple_repeat 4 126 0 3 802 351 306 37 25 chr15 28526112 28526273 -74968701 + Lx8 LINE L1 6927 7089 -384 3 802 23 0 0 0 chr15 28526640 28526663 -74968311 + AT_rich Low_complexity Low_complexity 1 23 0 3 802 285 246 31 39 chr15 28528058 28528185 -74966789 + Lx9 LINE L1 7387 7512 -132 3 802 248 240 130 0 chr15 28528197 28528297 -74966677 - Lx9 LINE L1 -28 7616 7504 3 802 468 0 0 0 chr15 28528706 28528758 -74966216 + (TC)n Simple_repeat Simple_repeat 2 53 0 4 802 240 100 0 0 chr15 28528758 28528797 -74966177 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 802 221 377 26 0 chr15 28528834 28528911 -74966063 - RSINE1 SINE B4 -81 84 6 4 802 674 319 57 10 chr15 28528925 28529118 -74965856 - B4A SINE B4 -82 210 9 4 802 1179 334 82 25 chr15 28529643 28530165 -74964809 - MLT1F2 LTR MaLR 0 560 9 4 802 454 333 14 7 chr15 28530543 28530685 -74964289 + RSINE1 SINE B4 8 150 -15 4 802 522 46 0 0 chr15 28530690 28530755 -74964219 + (CA)n Simple_repeat Simple_repeat 1 65 0 4 802 225 380 16 0 chr15 28530833 28530962 -74964012 - Lx8 LINE L1 -829 6644 6514 4 802 392 294 58 54 chr15 28530962 28531175 -74963799 - L1MC LINE L1 -2372 5413 5199 4 802 364 258 22 22 chr15 28531326 28531417 -74963557 - PB1D10 SINE Alu -1 116 26 4 802 391 283 43 13 chr15 28531506 28531739 -74963235 - L1MC LINE L1 -1505 4641 4402 4 802 404 136 25 0 chr15 28531939 28532020 -74962954 - Lx9 LINE L1 -28 7616 7534 5 802 441 0 0 0 chr15 28532028 28532077 -74962897 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 802 368 200 67 0 chr15 28532079 28532169 -74962805 - Lx9 LINE L1 -193 7451 7356 5 802 539 323 41 26 chr15 28532441 28532635 -74962339 + B3 SINE B2 2 198 -18 5 802 2052 248 39 47 chr15 28532841 28533477 -74961497 - Lx7 LINE L1 0 7696 7066 5 802 2463 152 31 14 chr15 28534125 28534571 -74960403 + RLTR20B2 LTR ERVK 1 454 -106 5 802 911 152 14 0 chr15 28534577 28534795 -74960179 + CT-rich Low_complexity Low_complexity 1 221 0 5 802 374 242 21 21 chr15 28534804 28534901 -74960073 + RLTR20B2 LTR ERVK 464 560 0 5 802 234 294 138 23 chr15 28535059 28535146 -74959828 - MTD LTR MaLR -26 353 257 5 802 380 282 61 43 chr15 28535200 28535363 -74959611 - MTD LTR MaLR -244 175 10 5 802 444 19 0 0 chr15 28535547 28535600 -74959374 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 802 1009 226 14 5 chr15 28535699 28535912 -74959062 - B3 SINE B2 0 216 2 5 802 339 174 128 21 chr15 28536213 28536307 -74958667 + Lx9 LINE L1 7532 7635 -9 5 802 225 94 0 0 chr15 28536672 28536704 -74958270 + (T)n Simple_repeat Simple_repeat 1 32 0 6 802 367 252 127 78 chr15 28536719 28536861 -74958113 + MTE2a LTR MaLR 125 273 -106 6 802 737 331 76 100 chr15 28538180 28538828 -74956146 - MLT1E1A LTR MaLR 0 680 49 6 802 261 0 0 0 chr15 28538897 28538926 -74956048 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 802 354 45 0 0 chr15 28538926 28538969 -74956005 + (GA)n Simple_repeat Simple_repeat 2 45 0 6 802 8194 7 0 0 chr15 28540187 28541123 -74953851 - L1Md_T LINE L1 0 6582 5671 6 802 327 218 0 82 chr15 28541172 28541257 -74953717 + 4.5SRNA scRNA scRNA 16 93 -1 6 802 696 304 14 19 chr15 28541257 28541468 -74953506 + B3 SINE B2 2 211 -5 6 802 216 0 0 0 chr15 28541517 28541541 -74953433 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 802 353 360 12 44 chr15 28541623 28541783 -74953191 + MLT1B LTR MaLR 45 199 -191 6 802 450 0 0 0 chr15 28541994 28542044 -74952930 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 7 802 570 122 0 34 chr15 28542835 28542954 -74952020 + CT-rich Low_complexity Low_complexity 2 116 0 7 802 1223 94 0 6 chr15 28543698 28543879 -74951095 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 7 802 531 45 0 0 chr15 28543883 28543949 -74951025 + (CCCCCT)n Simple_repeat Simple_repeat 1 66 0 7 802 2162 208 56 0 chr15 28543950 28544436 -74950538 - Lx9 LINE L1 -41 7603 7091 7 802 432 200 35 43 chr15 28544540 28544655 -74950319 - ORR1B1 LTR MaLR -8 386 273 7 802 2232 116 3 3 chr15 28544655 28545001 -74949973 - L1_Mur2 LINE L1 -1974 3903 3558 7 802 1042 126 0 7 chr15 28545001 28545153 -74949821 + L1_Mm LINE L1 5408 5558 -325 7 802 1123 86 0 0 chr15 28545141 28545293 -74949681 - L1_Mm LINE L1 -696 5187 5036 7 802 625 229 39 50 chr15 28545278 28545457 -74949517 + Lx6 LINE L1 7256 7432 -28 7 802 251 312 0 12 chr15 28545470 28545551 -74949423 - MLT1J1 LTR MaLR -2 442 363 8 802 207 88 0 0 chr15 28546069 28546103 -74948871 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 802 1744 103 40 7 chr15 28546162 28546436 -74948538 - L1_Mus1 LINE L1 -852 5031 4749 8 802 6749 89 36 8 chr15 28546436 28547923 -74947051 + L1_Mus1 LINE L1 5036 6565 -2 8 802 256 305 24 12 chr15 28548178 28548261 -74946713 - ORR1A4 LTR MaLR 0 329 246 8 802 1523 220 50 38 chr15 28548261 28548658 -74946316 + Lx2B LINE L1 6599 7000 0 8 802 292 315 44 22 chr15 28548662 28548753 -74946221 - ORR1B1 LTR MaLR -73 306 214 7 802 266 303 150 75 chr15 28548837 28549037 -74945937 - ORR1B1 LTR MaLR -162 217 3 7 802 716 273 0 29 chr15 28549348 28549518 -74945456 - RSINE1 SINE B4 0 165 1 8 802 21 57 0 0 chr15 28549591 28549626 -74945348 + AT_rich Low_complexity Low_complexity 1 35 0 8 802 29 0 0 0 chr15 28549664 28549693 -74945281 + AT_rich Low_complexity Low_complexity 1 29 0 8 802 558 0 0 0 chr15 28549798 28549860 -74945114 + (TC)n Simple_repeat Simple_repeat 1 62 0 8 802 1982 306 51 67 chr15 28550080 28550978 -74943996 - Lx8 LINE L1 -456 7017 6134 8 802 1756 254 108 30 chr15 28551903 28552411 -74942563 - RMER15 LTR ERVL -1 574 27 9 802 321 26 0 0 chr15 28553406 28553444 -74941530 + (TA)n Simple_repeat Simple_repeat 1 38 0 9 802 4617 58 2 0 chr15 28553693 28554274 -74940700 - L1_Mm LINE L1 -315 5568 4987 9 802 1209 70 6 11 chr15 28554274 28554448 -74940526 + L1Md_F2 LINE L1 6407 6579 -3 9 802 2647 88 41 25 chr15 28554506 28554900 -74940074 + MTB LTR MaLR 1 400 0 9 802 486 0 0 0 chr15 28555985 28556039 -74938935 + (CA)n Simple_repeat Simple_repeat 2 55 0 9 802 4460 140 4 3 chr15 28556522 28557225 -74937749 + MERVL_2A-int LTR ERVL 1576 2279 -3482 9 802 410 318 35 17 chr15 28557230 28557403 -74937571 + Cheshire DNA MER1_type 1929 2104 -316 9 802 316 290 78 31 chr15 28558067 28558195 -74936779 + MLT2B3 LTR ERVL 127 260 -410 9 802 298 294 131 95 chr15 28558242 28558464 -74936510 + MLT2B3 LTR ERVL 378 607 -110 9 802 701 102 9 0 chr15 28558520 28558628 -74936346 + (GAA)n Simple_repeat Simple_repeat 1 109 0 9 802 1223 298 31 15 chr15 28559148 28559605 -74935369 + Lx8 LINE L1 6331 6794 -679 1 802 416 54 0 0 chr15 28559619 28559675 -74935299 - L1Md_F2 LINE L1 -13 6569 6514 1 802 30720 75 11 1 chr15 28559680 28564605 -74930369 - L1Md_F2 LINE L1 -231 6351 1371 1 802 779 297 36 101 chr15 28564607 28564881 -74930093 + Lx8 LINE L1 6793 7053 -420 1 802 1442 102 16 39 chr15 28564881 28565135 -74929839 + Lx LINE L1 6404 6651 -3 1 802 779 311 31 83 chr15 28565135 28565307 -74929667 + Lx8 LINE L1 7054 7225 -248 1 802 200 157 39 0 chr15 28565314 28565365 -74929609 + T-rich Low_complexity Low_complexity 3 55 0 1 802 585 254 42 23 chr15 28565372 28565586 -74929388 + Lx8 LINE L1 7236 7453 -20 1 802 761 125 26 0 chr15 28565586 28565738 -74929236 + (TATG)n Simple_repeat Simple_repeat 1 156 0 1 802 335 347 113 0 chr15 28565987 28566200 -74928774 - MER115 DNA Tip100 -12 681 445 1 802 290 283 9 28 chr15 28566657 28566766 -74928208 + (CATATA)n Simple_repeat Simple_repeat 4 110 0 1 802 1532 6 6 0 chr15 28568889 28569002 -74925972 + (TTC)n Simple_repeat Simple_repeat 1 114 0 1 802 1539 17 0 0 chr15 28569002 28569180 -74925794 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 1 802 1532 6 6 0 chr15 28569180 28569245 -74925729 + (TTC)n Simple_repeat Simple_repeat 2 66 0 1 802 408 97 0 0 chr15 28569527 28569589 -74925385 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 802 383 362 54 47 chr15 28569614 28569892 -74925082 - B4A SINE B4 -11 281 2 1 802 182 233 24 110 chr15 28570654 28570736 -74924238 + MIRb SINE MIR 116 190 -78 1 802 338 0 24 0 chr15 28570765 28570807 -74924167 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 802 1172 111 33 16 chr15 28571151 28571334 -74923640 + B2_Mm2 SINE B2 2 187 -8 1 802 1991 230 63 25 chr15 28571358 28571956 -74923018 + Lx7 LINE L1 5818 6438 -1258 1 802 461 260 10 0 chr15 28572090 28572186 -74922788 + RSINE1 SINE B4 46 142 -23 1 802 1108 102 45 6 chr15 28572341 28572518 -74922456 - ORR1A2 LTR MaLR -7 320 137 1 802 984 130 166 0 chr15 28572513 28572682 -74922292 - ORR1A1 LTR MaLR -59 287 91 1 802 415 248 187 40 chr15 28572686 28572916 -74922058 + RLTR41 LTR ERV1 254 499 -33 1 802 402 111 0 14 chr15 28572917 28572990 -74921984 - ORR1A2 LTR MaLR -255 72 1 1 803 235 281 132 52 chr15 28574479 28574730 -74920244 - LTR73 LTR ERV1 -46 526 256 1 803 324 255 83 21 chr15 28575607 28575703 -74919271 - PB1D10 SINE Alu -12 105 4 1 803 269 286 24 12 chr15 28575708 28575793 -74919181 + MLT1C LTR MaLR 34 119 -348 1 803 532 310 15 46 chr15 28575889 28576085 -74918889 + MLT1C LTR MaLR 276 465 -2 1 803 191 292 168 40 chr15 28576119 28576244 -74918730 + L2a LINE L2 3286 3426 0 1 803 533 323 126 49 chr15 28576677 28577042 -74917932 - MLT1D LTR MaLR -78 427 35 1 803 523 317 66 26 chr15 28577790 28578017 -74916957 + MLT1B LTR MaLR 18 253 -137 1 803 389 122 0 13 chr15 28578143 28578218 -74916756 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 803 4107 58 2 4 chr15 28578430 28578950 -74916024 - L1Md_F2 LINE L1 -2 6580 6062 1 803 893 91 7 20 chr15 28579207 28579353 -74915621 - L1Md_F2 LINE L1 -3 6579 6436 1 803 486 331 11 0 chr15 28580158 28580336 -74914638 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 803 309 296 69 44 chr15 28580390 28580549 -74914425 - RSINE1 SINE B4 0 165 3 1 803 1387 86 0 0 chr15 28581381 28581567 -74913407 + L1_Mus1 LINE L1 6380 6565 -2 1 803 600 320 15 20 chr15 28581842 28582043 -74912931 - MER58A DNA MER1_type -18 206 7 1 803 2843 101 33 5 chr15 28582472 28582898 -74912076 - Lx2 LINE L1 -1 6996 6559 1 803 204 75 0 91 chr15 28583224 28583268 -74911706 + A-rich Low_complexity Low_complexity 2 41 0 1 803 796 159 6 22 chr15 28583362 28583542 -74911432 + GA-rich Low_complexity Low_complexity 3 179 0 1 803 31 26 0 0 chr15 28584784 28584822 -74910152 + AT_rich Low_complexity Low_complexity 1 38 0 1 803 390 304 51 116 chr15 28585055 28585271 -74909703 + MLT1A LTR MaLR 173 374 0 1 803 1178 265 41 41 chr15 28585299 28585692 -74909282 - Lx8 LINE L1 -664 6809 6417 1 803 1144 256 159 16 chr15 28585767 28586252 -74908722 + Lx8 LINE L1 6920 7473 0 1 803 333 324 102 18 chr15 28586436 28586476 -74908498 + L1MA7 LINE L1 5736 5775 -516 1 803 1197 98 0 0 chr15 28586476 28586691 -74908283 + (CA)n Simple_repeat Simple_repeat 1 215 0 1 803 333 324 102 18 chr15 28586691 28586931 -74908043 + L1MA7 LINE L1 5776 6040 -251 1 803 388 361 43 37 chr15 28586943 28587104 -74907870 + RSINE1 SINE B4 3 164 -1 1 803 404 37 0 18 chr15 28587231 28587286 -74907688 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 803 335 222 28 0 chr15 28587506 28587578 -74907396 - PB1D7 SINE Alu -6 114 41 1 803 272 148 86 29 chr15 28587902 28588112 -74906862 + (TA)n Simple_repeat Simple_repeat 1 222 0 1 803 501 232 26 18 chr15 28588168 28588282 -74906692 - PB1D9 SINE Alu -5 115 1 1 803 326 250 236 6 chr15 28588346 28588511 -74906463 - L1M5 LINE L1 -348 5776 5574 1 803 342 0 0 0 chr15 28588999 28589037 -74905937 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 803 243 0 0 0 chr15 28589118 28589145 -74905829 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 1 803 681 151 0 0 chr15 28589145 28589264 -74905710 + CT-rich Low_complexity Low_complexity 3 121 0 1 803 1732 50 5 0 chr15 28590345 28590563 -74904411 - L1_Mus1 LINE L1 -1 6566 6348 1 803 1017 63 0 0 chr15 28590858 28591000 -74903974 + (CA)n Simple_repeat Simple_repeat 2 143 0 1 803 1922 149 5 62 chr15 28591786 28592221 -74902753 - RMER17C LTR ERVK 0 410 1 1 803 342 320 32 45 chr15 28592420 28592574 -74902400 - MER90a LTR ERV1 -22 592 441 1 803 344 241 134 54 chr15 28594648 28594673 -74900301 - MLT2C1 LTR ERVL -7 556 530 1 803 468 0 0 0 chr15 28594673 28594725 -74900249 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 803 344 249 135 53 chr15 28594725 28594868 -74900106 - MLT2C1 LTR ERVL -34 529 396 1 803 192 111 0 0 chr15 28595156 28595192 -74899782 + (A)n Simple_repeat Simple_repeat 1 36 0 1 803 228 156 0 22 chr15 28595633 28595679 -74899295 + C-rich Low_complexity Low_complexity 6 50 0 1 803 408 20 0 0 chr15 28596299 28596348 -74898626 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 803 357 232 130 10 chr15 28596374 28596474 -74898500 - B3A SINE B2 -80 118 7 1 803 2753 26 8 83 chr15 28596852 28597226 -74897748 + ORR1A0 LTR MaLR 1 346 0 1 803 1140 64 0 0 chr15 28597795 28597936 -74897038 + B1_Mus2 SINE Alu 2 142 -5 1 803 573 318 127 3 chr15 28598041 28598404 -74896570 - L1MB2 LINE L1 -60 6111 5704 1 803 201 250 0 0 chr15 28598782 28598822 -74896152 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 1 803 309 327 34 68 chr15 28598838 28598956 -74896018 - B4A SINE B4 0 292 179 1 803 388 221 65 0 chr15 28599008 28599085 -74895889 - B4 SINE B4 -208 84 3 1 803 692 54 11 0 chr15 28599331 28599424 -74895550 + (TC)n Simple_repeat Simple_repeat 1 94 0 1 803 213 39 0 0 chr15 28599425 28599451 -74895523 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 803 1033 203 18 9 chr15 28599992 28600216 -74894758 + URR1A DNA MER1_type 1 226 0 1 803 2235 189 52 24 chr15 28600584 28601174 -74893800 - L1_Mur3 LINE L1 -535 5345 4739 1 803 469 309 65 62 chr15 28601603 28601969 -74893005 - ORR1C1 LTR MaLR -2 372 1 1 803 892 176 12 0 chr15 28602022 28602192 -74892782 + RLTR25B LTR ERVK 621 792 -236 1 803 497 227 8 48 chr15 28602193 28602318 -74892656 + RLTR25B LTR ERVK 984 1103 0 1 803 3183 214 12 26 chr15 28603309 28603990 -74890984 + Lx5 LINE L1 6377 7047 -3 1 803 210 164 70 35 chr15 28604012 28604069 -74890905 + GA-rich Low_complexity Low_complexity 4 62 0 1 803 369 0 0 0 chr15 28604071 28604112 -74890862 + (GA)n Simple_repeat Simple_repeat 1 41 0 1 803 540 159 0 0 chr15 28605244 28605382 -74889592 + (TA)n Simple_repeat Simple_repeat 2 139 0 1 803 423 0 0 0 chr15 28605549 28605596 -74889378 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 803 438 20 0 0 chr15 28605596 28605646 -74889328 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 803 4316 24 0 2 chr15 28605662 28606156 -74888818 + MT2_Mm LTR ERVL 1 493 0 1 803 186 43 0 0 chr15 28606933 28606956 -74888018 + (A)n Simple_repeat Simple_repeat 1 23 0 1 803 21 36 0 0 chr15 28607706 28607734 -74887240 + AT_rich Low_complexity Low_complexity 1 28 0 1 803 246 62 0 0 chr15 28607785 28607817 -74887157 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 803 452 81 0 0 chr15 28607821 28607883 -74887091 - B1_Mm SINE Alu 0 147 86 1 803 557 315 68 10 chr15 28607915 28608120 -74886854 - ID_B1 SINE B4 -5 219 3 1 803 26 0 0 0 chr15 28608490 28608516 -74886458 + AT_rich Low_complexity Low_complexity 1 26 0 1 803 230 324 0 0 chr15 28609148 28609219 -74885755 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 803 574 270 176 54 chr15 28609491 28609730 -74885244 - B4 SINE B4 -18 274 7 1 803 598 174 55 9 chr15 28610369 28610479 -74884495 + MTC LTR MaLR 6 120 -301 1 803 690 279 60 26 chr15 28610482 28610714 -74884260 - Lx6 LINE L1 -26 7434 7195 1 803 1392 189 15 29 chr15 28610728 28611000 -74883974 + MTC LTR MaLR 146 413 -8 1 803 502 293 19 26 chr15 28611362 28611516 -74883458 - Lx8 LINE L1 -130 7343 7191 1 803 249 297 0 0 chr15 28611524 28611598 -74883376 + Lx7 LINE L1 7039 7112 -584 1 803 254 217 0 0 chr15 28611891 28611937 -74883037 + RMER1C Other Other 696 741 -601 1 803 805 202 33 143 chr15 28611937 28612089 -74882885 + RMER1C Other Other 1100 1227 -115 1 803 405 0 0 0 chr15 28612089 28612134 -74882840 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 1 803 805 202 33 143 chr15 28612134 28612253 -74882721 + RMER1C Other Other 1228 1341 -1 1 803 679 89 0 31 chr15 28613419 28613547 -74881427 - L1Md_F2 LINE L1 0 6582 6459 1 803 21 57 0 0 chr15 28614201 28614236 -74880738 + AT_rich Low_complexity Low_complexity 1 35 0 1 803 32 57 0 0 chr15 28614775 28614828 -74880146 + AT_rich Low_complexity Low_complexity 1 53 0 1 803 4709 109 17 21 chr15 28614991 28615705 -74879269 + Lx LINE L1 5943 6653 -1 1 803 181 350 24 48 chr15 28616774 28616858 -74878116 - L2c LINE L2 -31 3356 3275 1 803 210 91 0 0 chr15 28617671 28617704 -74877270 + (CTAA)n Simple_repeat Simple_repeat 4 36 0 2 803 334 288 155 70 chr15 28617773 28618431 -74876543 + L1M2 LINE L1 2231 2944 -3199 2 803 721 345 45 45 chr15 28618463 28618754 -74876220 + B4A SINE B4 2 292 0 2 803 330 26 0 0 chr15 28618759 28618798 -74876176 + (TC)n Simple_repeat Simple_repeat 1 39 0 2 803 1305 243 59 96 chr15 28618856 28619584 -74875390 - RMER19B LTR ERVK -13 889 1 2 803 302 254 138 21 chr15 28619588 28619733 -74875241 + L1M2 LINE L1 3045 3206 -2937 2 803 1995 287 62 32 chr15 28619875 28620900 -74874074 + L1M2 LINE L1 3344 4398 -1745 2 803 1105 101 0 0 chr15 28621916 28622064 -74872910 + B1_Mus1 SINE Alu 1 148 0 2 803 1698 208 190 46 chr15 28622078 28622596 -74872378 + RMER20B LTR ERVK 22 614 -13 2 803 522 126 15 30 chr15 28625451 28625582 -74869392 + (TCTCTG)n Simple_repeat Simple_repeat 4 132 0 2 803 375 78 0 0 chr15 28625585 28625636 -74869338 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 803 478 299 115 50 chr15 28625637 28625855 -74869119 - B4A SINE B4 -22 270 39 2 803 23 54 0 0 chr15 28625977 28626014 -74868960 + AT_rich Low_complexity Low_complexity 1 37 0 2 803 343 299 129 28 chr15 28626714 28626757 -74868217 + MLT1B LTR MaLR 143 188 -202 2 803 471 35 0 0 chr15 28626757 28626814 -74868160 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 803 343 299 129 28 chr15 28626814 28626987 -74867987 + MLT1B LTR MaLR 189 380 -10 2 803 189 0 0 0 chr15 28627421 28627442 -74867532 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 2 803 256 247 105 21 chr15 28629908 28630003 -74864971 + MTEa LTR MaLR 273 375 -4 2 803 1052 131 0 6 chr15 28630321 28630497 -74864477 + (TTC)n Simple_repeat Simple_repeat 2 176 0 2 803 240 154 0 0 chr15 28630742 28630794 -74864180 + (TGAA)n Simple_repeat Simple_repeat 3 54 0 2 803 297 0 0 0 chr15 28630827 28630860 -74864114 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 803 791 272 43 5 chr15 28630875 28631082 -74863892 + B3 SINE B2 1 215 -1 2 803 22 0 0 0 chr15 28631269 28631291 -74863683 + AT_rich Low_complexity Low_complexity 1 22 0 2 803 271 71 57 34 chr15 28631551 28631639 -74863335 + (TA)n Simple_repeat Simple_repeat 2 91 0 2 803 538 156 7 7 chr15 28631735 28631853 -74863121 + CT-rich Low_complexity Low_complexity 19 136 0 2 803 387 0 0 0 chr15 28631853 28631896 -74863078 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 803 538 156 7 7 chr15 28631896 28631913 -74863061 + polypyrimidine Low_complexity Low_complexity 1 18 0 2 803 40 0 0 0 chr15 28632301 28632341 -74862633 + AT_rich Low_complexity Low_complexity 1 40 0 2 803 1078 142 178 5 chr15 28632369 28632588 -74862386 - Lx LINE L1 -27 6627 6371 2 803 366 373 35 6 chr15 28633535 28633705 -74861269 + LTR16A LTR ERVL 261 435 -16 2 803 432 37 0 0 chr15 28635171 28635225 -74859749 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 2 803 28 0 0 0 chr15 28635414 28635442 -74859532 + AT_rich Low_complexity Low_complexity 1 28 0 2 803 263 345 24 0 chr15 28635458 28635542 -74859432 + MLT1H LTR MaLR 26 111 -438 2 803 349 396 105 12 chr15 28636962 28637133 -74857841 + B3A SINE B2 2 188 -10 2 803 217 284 0 0 chr15 28637392 28637473 -74857501 + T-rich Low_complexity Low_complexity 1 81 0 2 803 209 238 16 16 chr15 28637473 28637537 -74857437 + GA-rich Low_complexity Low_complexity 1 64 0 2 803 330 333 122 7 chr15 28637541 28637680 -74857294 + HAL1-3A_ME LINE L1 2285 2439 -419 2 803 1112 117 0 11 chr15 28637702 28637884 -74857090 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 2 803 215 0 67 0 chr15 28637884 28637914 -74857060 + (GAGAA)n Simple_repeat Simple_repeat 1 32 0 2 803 426 281 112 39 chr15 28638974 28639152 -74855822 - RMER15 LTR ERVL -17 558 368 2 803 427 276 153 30 chr15 28639736 28640193 -74854781 + L1M2 LINE L1 4176 4691 -1449 2 803 309 318 0 0 chr15 28640390 28640478 -74854496 - L1MC4 LINE L1 -626 7416 7329 2 803 277 268 108 68 chr15 28640607 28640620 -74854354 - B2_Mm1a SINE B2 -1 192 180 2 803 477 50 0 0 chr15 28640620 28640680 -74854294 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 803 431 261 172 26 chr15 28640680 28640845 -74854129 - B3 SINE B2 -27 189 5 2 803 256 113 37 19 chr15 28641997 28642051 -74852923 + CT-rich Low_complexity Low_complexity 6 60 0 2 803 272 280 13 13 chr15 28642067 28642143 -74852831 + MLT1G3 LTR MaLR 3 78 -517 2 803 295 309 78 16 chr15 28642186 28642314 -74852660 - L1MC4 LINE L1 -1103 6779 6640 2 803 525 16 0 0 chr15 28642496 28642558 -74852416 + (TCTA)n Simple_repeat Simple_repeat 3 64 0 2 803 25 0 0 0 chr15 28642790 28642815 -74852159 + AT_rich Low_complexity Low_complexity 1 25 0 2 803 27 49 0 0 chr15 28644497 28644538 -74850436 + AT_rich Low_complexity Low_complexity 1 41 0 2 803 1579 178 85 25 chr15 28644550 28644913 -74850061 - Lx LINE L1 -2 6652 6268 2 803 21 0 0 0 chr15 28645415 28645436 -74849538 + AT_rich Low_complexity Low_complexity 1 21 0 2 803 247 270 180 0 chr15 28645599 28645688 -74849286 + B1F SINE Alu 9 113 -36 2 803 432 0 0 0 chr15 28645692 28645740 -74849234 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 803 483 33 0 0 chr15 28645748 28645809 -74849165 + (GA)n Simple_repeat Simple_repeat 1 61 0 2 803 503 301 94 51 chr15 28645916 28646385 -74848589 - L1MB7 LINE L1 -16 6168 5680 2 803 416 289 41 0 chr15 28646390 28646511 -74848463 - MLT1B LTR MaLR -2 388 263 2 803 488 254 98 64 chr15 28646927 28647192 -74847782 - Lx7 LINE L1 0 7696 7423 2 803 300 120 20 0 chr15 28647192 28647242 -74847732 + HAL1-3A_ME LINE L1 1977 2027 -831 2 803 300 213 0 39 chr15 28647248 28647326 -74847648 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 803 305 111 0 0 chr15 28647330 28647375 -74847599 + HAL1-3A_ME LINE L1 1981 2025 -833 2 803 237 188 0 0 chr15 28647476 28647524 -74847450 - Lx7 LINE L1 -361 7335 7288 2 803 1509 265 137 4 chr15 28647722 28648226 -74846748 + Lx8 LINE L1 6400 6970 -503 2 803 207 100 0 0 chr15 28648254 28648284 -74846690 + (CCA)n Simple_repeat Simple_repeat 1 30 0 2 803 2780 123 0 2 chr15 28649284 28649692 -74845282 + MTB_Mm LTR MaLR 1 407 0 2 803 684 279 58 32 chr15 28649949 28650138 -74844836 + B4 SINE B4 2 195 -97 2 803 297 0 0 0 chr15 28651791 28651824 -74843150 + (TC)n Simple_repeat Simple_repeat 2 34 0 2 803 234 0 0 0 chr15 28651824 28651849 -74843125 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 803 540 42 0 0 chr15 28651849 28651919 -74843055 + (GA)n Simple_repeat Simple_repeat 1 71 0 2 803 243 232 18 0 chr15 28652705 28652761 -74842213 + C-rich Low_complexity Low_complexity 1 57 0 2 803 983 299 106 12 chr15 28652808 28653214 -74841760 - Lx8 LINE L1 -188 7285 6842 2 803 518 292 30 50 chr15 28653276 28653478 -74841496 - B3A SINE B2 0 198 1 2 803 479 322 56 150 chr15 28653970 28654364 -74840610 + MLT1B LTR MaLR 15 371 -19 2 803 2424 203 91 19 chr15 28654920 28655159 -74839815 + RMER15 LTR ERVL 1 273 -302 2 803 922 101 13 0 chr15 28655159 28655308 -74839666 + (TC)n Simple_repeat Simple_repeat 2 152 0 2 803 4363 52 0 15 chr15 28655308 28655854 -74839120 - L1_Mus1 LINE L1 -4 6563 6026 2 803 2424 203 91 19 chr15 28655854 28656149 -74838825 + RMER15 LTR ERVL 274 574 -1 2 803 663 303 49 114 chr15 28656341 28656647 -74838327 + B4A SINE B4 6 291 -1 2 803 604 133 28 7 chr15 28656677 28656811 -74838163 + (CA)n Simple_repeat Simple_repeat 2 139 0 2 803 405 0 0 0 chr15 28656811 28656856 -74838118 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 803 604 133 28 7 chr15 28656856 28656865 -74838109 + (CA)n Simple_repeat Simple_repeat 2 10 0 2 803 357 260 16 24 chr15 28656884 28657010 -74837964 + (CA)n Simple_repeat Simple_repeat 2 126 0 2 803 8307 66 1 1 chr15 28657066 28658134 -74836840 + L1Md_F2 LINE L1 4518 5585 -298 2 803 7994 34 14 2 chr15 28658135 28659101 -74835873 + L1Md_F2 LINE L1 5587 6563 -19 2 803 1292 66 0 5 chr15 28660316 28660500 -74834474 + L1Md_F2 LINE L1 6400 6582 0 2 803 402 21 0 0 chr15 28661411 28661458 -74833516 + (TC)n Simple_repeat Simple_repeat 1 47 0 2 803 1036 62 0 27 chr15 28661479 28661628 -74833346 + B2_Mm2 SINE B2 1 145 -50 2 803 30 0 0 0 chr15 28661912 28661942 -74833032 + AT_rich Low_complexity Low_complexity 1 30 0 2 803 362 200 53 0 chr15 28663963 28664038 -74830936 + Lx8 LINE L1 7085 7163 -310 2 803 1343 192 114 40 chr15 28664438 28664561 -74830413 + ORR1C1 LTR MaLR 1 143 -235 2 803 911 9 9 0 chr15 28664561 28664669 -74830305 + (TC)n Simple_repeat Simple_repeat 1 109 0 2 803 1343 192 114 40 chr15 28664669 28664897 -74830077 + ORR1C1 LTR MaLR 144 377 -1 2 803 2706 200 139 5 chr15 28664927 28665596 -74829378 - Lx9 LINE L1 -8 7636 6878 2 803 649 305 15 15 chr15 28665613 28665816 -74829158 - B3 SINE B2 -9 207 5 2 803 25 31 0 0 chr15 28666427 28666459 -74828515 + AT_rich Low_complexity Low_complexity 1 32 0 2 803 2352 214 66 63 chr15 28666499 28666626 -74828348 - Lx5 LINE L1 -9 7041 6910 2 803 690 101 0 0 chr15 28666626 28666735 -74828239 + (CA)n Simple_repeat Simple_repeat 2 110 0 2 803 2352 214 66 63 chr15 28666735 28667209 -74827765 - Lx5 LINE L1 -141 6909 6438 2 803 3412 164 45 40 chr15 28667197 28667251 -74827723 - L1_Mur2 LINE L1 -1969 3908 3858 2 803 2683 57 18 0 chr15 28667251 28667585 -74827389 - ORR1A1 LTR MaLR -4 342 3 2 803 3412 164 45 40 chr15 28667585 28668278 -74826696 - L1_Mur2 LINE L1 -2020 3857 3157 2 803 444 353 35 40 chr15 28668361 28668559 -74826415 - B3A SINE B2 0 198 2 2 803 885 191 175 14 chr15 28668572 28668864 -74826110 - Lx9 LINE L1 -3 7641 7303 2 803 493 289 63 8 chr15 28668901 28669169 -74825805 - L1MC1 LINE L1 -309 6024 5742 2 803 372 333 80 28 chr15 28669271 28669420 -74825554 + MLT2B3 LTR ERVL 346 499 -55 2 803 432 0 0 0 chr15 28669420 28669468 -74825506 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 803 372 333 80 28 chr15 28669468 28669494 -74825480 + MLT2B3 LTR ERVL 500 530 -24 2 803 24 0 0 0 chr15 28669677 28669701 -74825273 + AT_rich Low_complexity Low_complexity 1 24 0 2 803 776 252 76 22 chr15 28669707 28669919 -74825055 - ID_B1 SINE B4 -74 218 14 2 803 307 364 82 63 chr15 28671662 28671988 -74822986 - ORR1E LTR MaLR -17 353 2 2 803 234 211 169 0 chr15 28671999 28672070 -74822904 + MLT1D LTR MaLR 374 456 -49 2 803 342 0 0 0 chr15 28672082 28672120 -74822854 + (TATTG)n Simple_repeat Simple_repeat 1 38 0 2 803 2753 252 73 104 chr15 28672141 28673249 -74821725 - Lx2B LINE L1 -13 6987 5895 2 803 2096 112 53 0 chr15 28673249 28673572 -74821402 + Lx3_Mus LINE L1 6658 6997 -12 3 803 2753 211 35 34 chr15 28673572 28673943 -74821031 - Lx2B LINE L1 -1106 5894 5555 2 803 7879 165 32 8 chr15 28673944 28675443 -74819531 + Lx2B LINE L1 4011 5545 -332 2 803 195 42 0 0 chr15 28675851 28675875 -74819099 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 803 23 0 0 0 chr15 28676769 28676792 -74818182 + AT_rich Low_complexity Low_complexity 1 23 0 3 803 249 33 0 0 chr15 28677364 28677394 -74817580 + (TC)n Simple_repeat Simple_repeat 1 30 0 3 803 215 263 29 124 chr15 28677460 28677608 -74817366 - MIRb SINE MIR -66 202 56 3 803 852 293 48 8 chr15 28679012 28679263 -74815711 - MLT1B LTR MaLR 0 390 130 3 803 269 215 11 0 chr15 28679501 28679594 -74815380 + GA-rich Low_complexity Low_complexity 1 94 0 3 803 473 372 32 9 chr15 28679627 28679844 -74815130 - Lx8 LINE L1 -189 7284 7063 3 803 220 325 58 50 chr15 28680354 28680474 -74814500 - MIRb SINE MIR -21 247 127 3 803 617 325 68 103 chr15 28680479 28680983 -74813991 - MLT1E2 LTR MaLR 0 627 139 3 803 266 360 132 30 chr15 28681304 28681539 -74813435 - MLT1E2 LTR MaLR -268 281 23 3 803 497 352 21 29 chr15 28681704 28681985 -74812989 + B4A SINE B4 2 280 -12 3 803 30 69 0 0 chr15 28682031 28682089 -74812885 + AT_rich Low_complexity Low_complexity 1 58 0 3 803 293 293 55 77 chr15 28683289 28683470 -74811504 - MLT1G1 LTR MaLR -387 192 16 3 803 1125 121 0 0 chr15 28684131 28684305 -74810669 + (GGAAA)n Simple_repeat Simple_repeat 3 176 0 3 803 27 62 0 0 chr15 28685125 28685173 -74809801 + AT_rich Low_complexity Low_complexity 1 48 0 3 803 744 71 0 0 chr15 28685210 28685309 -74809665 + (CA)n Simple_repeat Simple_repeat 2 100 0 3 803 4134 161 30 40 chr15 28685370 28686500 -74808474 + Lx4B LINE L1 515 1635 -4242 3 803 291 79 0 0 chr15 28686484 28686522 -74808452 + Lx4B LINE L1 1790 1827 -4050 3 803 630 124 0 0 chr15 28686580 28686677 -74808297 + Lx4B LINE L1 3740 3836 -2041 3 803 9954 158 41 24 chr15 28686677 28689615 -74805359 + Lx4B LINE L1 4053 7050 -8 3 803 207 0 0 0 chr15 28689659 28689682 -74805292 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 3 803 312 210 0 0 chr15 28690215 28690296 -74804678 + (TA)n Simple_repeat Simple_repeat 1 81 0 3 803 232 272 12 58 chr15 28690881 28690967 -74804007 - RLTR19B LTR ERVK -260 455 374 3 803 472 362 0 0 chr15 28690904 28691031 -74803943 + B1F1 SINE Alu 6 132 -17 3 803 3572 147 75 74 chr15 28691497 28692088 -74802886 + RMER17D LTR ERVK 1 620 -269 3 803 1012 104 21 0 chr15 28692088 28692232 -74802742 - B1_Mm SINE Alu 0 147 1 3 803 3572 147 75 74 chr15 28692232 28692528 -74802446 + RMER17D LTR ERVK 621 889 0 3 803 10696 38 1 0 chr15 28692729 28694036 -74800938 - L1_Mm LINE L1 -668 5215 3907 3 803 311 211 28 0 chr15 28694036 28694107 -74800867 - ORR1D1 LTR MaLR -299 75 3 3 803 751 273 39 5 chr15 28695274 28695480 -74799494 - B3 SINE B2 0 216 4 3 803 462 267 174 68 chr15 28695622 28695915 -74799059 + MLT1E2 LTR MaLR 225 627 0 3 803 199 256 68 120 chr15 28696328 28696461 -74798513 - L3 LINE CR1 -1538 2951 2826 3 803 745 101 58 23 chr15 28697281 28697453 -74797521 + CT-rich Low_complexity Low_complexity 3 180 0 3 803 239 293 0 17 chr15 28697459 28697518 -74797456 + polypyrimidine Low_complexity Low_complexity 6 63 0 3 803 365 312 104 4 chr15 28697518 28697744 -74797230 - HAL1-3A_ME LINE L1 -419 2439 2285 3 803 236 196 34 51 chr15 28697746 28697805 -74797169 + polypyrimidine Low_complexity Low_complexity 4 61 0 3 803 699 157 23 23 chr15 28697805 28697981 -74796993 + CT-rich Low_complexity Low_complexity 5 180 0 3 803 357 132 0 0 chr15 28697981 28698034 -74796940 + (TCCC)n Simple_repeat Simple_repeat 3 55 0 3 803 308 60 0 39 chr15 28698038 28698090 -74796884 + (TCTCTG)n Simple_repeat Simple_repeat 3 52 0 3 803 742 309 31 5 chr15 28698092 28698287 -74796687 - B4A SINE B4 -92 200 1 3 803 387 268 36 18 chr15 28698472 28698639 -74796335 - L1MA6 LINE L1 -35 6265 6096 3 803 907 167 6 12 chr15 28698648 28698818 -74796156 - URR1A DNA MER1_type 0 226 58 3 803 746 304 103 56 chr15 28699178 28700020 -74794954 - L1MEf LINE L1 -4468 1732 851 3 803 25 31 0 0 chr15 28700298 28700330 -74794644 + AT_rich Low_complexity Low_complexity 1 32 0 3 803 1399 299 76 27 chr15 28700458 28700592 -74794382 - Lx9 LINE L1 -154 7490 7346 3 803 495 0 0 0 chr15 28700592 28700647 -74794327 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 803 1399 299 76 27 chr15 28700647 28701170 -74793804 - Lx9 LINE L1 -299 7345 6801 3 803 225 352 14 0 chr15 28701202 28701273 -74793701 - ID4_ SINE ID -4 79 8 3 803 459 67 37 37 chr15 28701778 28701886 -74793088 + (TCTA)n Simple_repeat Simple_repeat 2 109 0 3 803 1150 17 40 6 chr15 28701901 28702075 -74792899 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 3 803 353 352 12 6 chr15 28702099 28702262 -74792712 - RSINE1 SINE B4 0 165 2 3 803 618 303 16 51 chr15 28702798 28703020 -74791954 + B3A SINE B2 1 208 -8 3 803 26 30 0 0 chr15 28703538 28703571 -74791403 + AT_rich Low_complexity Low_complexity 1 33 0 3 803 426 204 0 0 chr15 28703683 28703796 -74791178 + (TG)n Simple_repeat Simple_repeat 2 114 0 3 803 481 292 0 28 chr15 28703988 28704129 -74790845 + RSINE1 SINE B4 5 141 -24 3 803 343 244 0 43 chr15 28704169 28704333 -74790641 + (CA)n Simple_repeat Simple_repeat 1 157 0 3 803 318 26 0 0 chr15 28704333 28704372 -74790602 + (TC)n Simple_repeat Simple_repeat 1 39 0 3 803 343 244 0 43 chr15 28704372 28704395 -74790579 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 803 27 73 0 0 chr15 28704473 28704528 -74790446 + AT_rich Low_complexity Low_complexity 1 55 0 3 804 25 0 0 0 chr15 28705208 28705233 -74789741 + AT_rich Low_complexity Low_complexity 1 25 0 3 804 23 68 0 0 chr15 28705780 28705824 -74789150 + AT_rich Low_complexity Low_complexity 1 44 0 3 804 408 354 106 47 chr15 28705934 28706275 -74788699 + MT2A LTR ERVL 1 361 -172 3 804 441 0 0 0 chr15 28706326 28706375 -74788599 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 804 744 197 28 7 chr15 28706844 28706987 -74787987 - Lx5 LINE L1 -461 6589 6444 3 804 10035 73 0 0 chr15 28706986 28708325 -74786649 - L1Md_F2 LINE L1 -1328 4555 3217 3 804 8489 58 0 0 chr15 28708323 28709393 -74785581 + L1Md_F2 LINE L1 4517 5586 -297 3 804 7994 51 2 2 chr15 28709393 28710388 -74784586 + L1Md_F2 LINE L1 5587 6581 -1 3 804 3809 191 47 11 chr15 28710559 28711512 -74783462 - Lx5 LINE L1 -598 6452 5458 3 804 4191 165 17 5 chr15 28711512 28712273 -74782701 - Lx5 LINE L1 -1272 4605 3836 3 804 315 0 0 0 chr15 28712387 28712422 -74782552 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 804 22 0 0 0 chr15 28714225 28714247 -74780727 + AT_rich Low_complexity Low_complexity 1 22 0 3 804 2182 176 94 51 chr15 28714811 28715241 -74779733 + RLTR20B3 LTR ERVK 21 471 -106 3 804 333 0 0 0 chr15 28715241 28715278 -74779696 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 804 2182 176 94 51 chr15 28715278 28715381 -74779593 + RLTR20B3 LTR ERVK 472 577 0 3 804 587 330 68 75 chr15 28715517 28715812 -74779162 + LTR52 LTR ERVL 5 297 -124 3 804 453 81 0 0 chr15 28715837 28715899 -74779075 + (TG)n Simple_repeat Simple_repeat 2 63 0 3 804 835 149 6 6 chr15 28716331 28716474 -74778500 + CT-rich Low_complexity Low_complexity 21 164 0 3 804 1020 79 0 0 chr15 28716474 28716613 -74778361 + (TTTC)n Simple_repeat Simple_repeat 4 142 0 3 804 835 149 6 6 chr15 28716613 28716631 -74778343 + polypyrimidine Low_complexity Low_complexity 4 20 0 3 804 1249 222 86 31 chr15 28716765 28717154 -74777820 - MT2B LTR ERVL 0 601 60 3 804 849 20 0 0 chr15 28719709 28719808 -74775166 + (GA)n Simple_repeat Simple_repeat 1 99 0 3 804 383 245 25 217 chr15 28719926 28720129 -74774845 - B4A SINE B4 -43 249 86 3 804 871 107 23 0 chr15 28719998 28720129 -74774845 - B1_Mus2 SINE Alu -13 134 1 3 804 374 269 99 60 chr15 28720129 28720177 -74774797 - MT2B LTR ERVL -305 293 108 3 804 296 198 37 12 chr15 28720306 28720388 -74774586 - Lx3C LINE L1 -34 6942 6859 3 804 1157 178 147 56 chr15 28720393 28720427 -74774547 + MTB LTR MaLR 34 67 -329 3 804 576 42 0 0 chr15 28720427 28720498 -74774476 + (GGAA)n Simple_repeat Simple_repeat 3 73 0 3 804 1189 142 160 44 chr15 28720498 28720748 -74774226 + MTB LTR MaLR 70 348 -52 3 804 464 308 106 45 chr15 28720781 28721046 -74773928 - MLT2F LTR ERVL -104 559 279 3 804 180 0 0 0 chr15 28721644 28721664 -74773310 + (CTA)n Simple_repeat Simple_repeat 1 20 0 3 804 273 57 0 0 chr15 28721679 28721714 -74773260 + (TTA)n Simple_repeat Simple_repeat 3 37 0 3 804 606 245 14 7 chr15 28721720 28721860 -74773114 - B1_Mur4 SINE Alu -5 145 5 3 804 312 364 42 24 chr15 28721873 28722039 -74772935 - MIR SINE MIR -78 184 16 3 804 2524 67 18 0 chr15 28722200 28722529 -74772445 - L1_Mus1 LINE L1 0 6567 6233 3 804 5242 67 20 6 chr15 28722529 28723286 -74771688 + L1_Mus1 LINE L1 5525 6291 -276 3 804 641 333 133 35 chr15 28723533 28723872 -74771102 + Tigger7 DNA MER2_type 6 377 -2114 3 804 733 336 56 71 chr15 28723986 28724396 -74770578 - MLT1E2 LTR MaLR 0 627 224 3 804 21 0 0 0 chr15 28725892 28725913 -74769061 + AT_rich Low_complexity Low_complexity 1 21 0 3 804 873 306 56 59 chr15 28726047 28726404 -74768570 + MER67D LTR ERV1 23 378 -136 3 804 374 0 22 0 chr15 28726549 28726595 -74768379 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 804 1795 243 17 42 chr15 28726595 28727071 -74767903 + RMER5 LTR ERV1 43 506 -28 3 804 249 280 48 39 chr15 28727275 28727379 -74767595 - RMER5 LTR ERV1 0 534 430 3 804 285 291 103 15 chr15 28728753 28728889 -74766085 - L1MC1 LINE L1 -56 6277 6130 3 804 670 299 128 24 chr15 28729314 28729650 -74765324 - MTEa LTR MaLR 0 379 9 3 804 23 54 0 0 chr15 28729986 28730023 -74764951 + AT_rich Low_complexity Low_complexity 1 37 0 3 804 277 299 125 23 chr15 28730119 28730383 -74764591 + L1ME1 LINE L1 5315 5605 -839 3 804 270 0 0 0 chr15 28730589 28730619 -74764355 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 804 1730 176 86 17 chr15 28730689 28731048 -74763926 + ORR1B1 LTR MaLR 3 386 -8 3 804 257 350 81 11 chr15 28731260 28731445 -74763529 + L1ME1 LINE L1 5862 6059 -120 3 804 643 277 35 46 chr15 28731818 28732015 -74762959 - B3A SINE B2 -2 196 2 3 804 192 152 0 0 chr15 28732039 28732072 -74762902 + CT-rich Low_complexity Low_complexity 3 35 0 3 804 273 331 99 0 chr15 28732619 28732740 -74762234 - MLT1A0 LTR MaLR -202 163 31 3 804 8027 43 0 0 chr15 28733340 28734544 -74760430 - L1Md_T LINE L1 0 6582 5414 3 804 995 112 0 6 chr15 28734644 28734815 -74760159 + (TC)n Simple_repeat Simple_repeat 1 170 0 3 804 22 70 0 0 chr15 28734847 28734890 -74760084 + AT_rich Low_complexity Low_complexity 1 43 0 4 804 24 32 0 0 chr15 28734926 28734957 -74760017 + AT_rich Low_complexity Low_complexity 1 31 0 4 804 447 325 5 5 chr15 28734957 28735146 -74759828 + L1MC2 LINE L1 5856 6044 -300 4 804 229 352 74 28 chr15 28735815 28735923 -74759051 - MLT1A0-int LTR MaLR -32 1355 1243 3 804 3017 176 16 26 chr15 28736027 28736242 -74758732 - Lx3_Mus LINE L1 -849 6160 5955 4 804 6149 87 4 4 chr15 28736242 28737087 -74757887 + Lx3_Mus LINE L1 6156 7000 -9 4 804 3017 177 14 24 chr15 28737087 28737488 -74757486 - Lx3_Mus LINE L1 -1055 5954 5544 4 804 489 255 11 0 chr15 28737608 28737702 -74757272 - B1F SINE Alu -29 120 26 4 804 396 0 0 0 chr15 28737704 28737748 -74757226 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 804 341 304 9 56 chr15 28737748 28737759 -74757215 - ID_B1 SINE B4 -118 106 96 4 804 2929 115 60 27 chr15 28738181 28738664 -74756310 - Lx LINE L1 -7 6647 6149 4 804 4165 127 0 1 chr15 28738664 28739411 -74755563 + Lx LINE L1 5438 6181 -473 4 804 2117 180 13 5 chr15 28741557 28741931 -74753043 - ORR1C1 LTR MaLR 0 378 2 4 804 948 309 43 7 chr15 28742060 28742360 -74752614 - Lx7 LINE L1 -522 7174 6864 4 804 2491 225 89 38 chr15 28742353 28742969 -74752005 - L1_Mur3 LINE L1 -956 4924 4291 4 804 525 16 0 0 chr15 28742969 28743031 -74751943 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 804 2491 225 89 38 chr15 28743031 28743233 -74751741 - L1_Mur3 LINE L1 -1590 4290 4066 4 804 827 97 11 43 chr15 28743262 28743446 -74751528 + CT-rich Low_complexity Low_complexity 3 180 0 4 804 582 283 117 29 chr15 28743642 28743861 -74751113 + Lx9 LINE L1 7274 7516 -128 4 804 219 69 0 0 chr15 28743861 28743890 -74751084 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 4 804 582 283 117 29 chr15 28743890 28743979 -74750995 + Lx9 LINE L1 7517 7609 -35 4 804 24 0 0 0 chr15 28744377 28744401 -74750573 + AT_rich Low_complexity Low_complexity 1 24 0 4 804 258 305 12 0 chr15 28744599 28744681 -74750293 - ORR1E LTR MaLR -2 377 295 4 804 1578 162 3 58 chr15 28744682 28745009 -74749965 + Lx2 LINE L1 6678 6986 -11 4 804 259 335 111 41 chr15 28745032 28745203 -74749771 - ORR1E LTR MaLR -167 192 10 4 804 491 181 73 13 chr15 28746858 28746985 -74747989 - Lx9 LINE L1 -1 7643 7506 4 804 405 0 0 0 chr15 28746985 28747030 -74747944 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 804 491 181 73 13 chr15 28747030 28747053 -74747921 - Lx9 LINE L1 -139 7505 7484 4 804 538 201 131 7 chr15 28747091 28747236 -74747738 - Lx9 LINE L1 -276 7368 7206 4 804 1422 258 66 13 chr15 28747466 28747858 -74747116 - MTC LTR MaLR -8 413 1 4 804 497 309 22 0 chr15 28747964 28748100 -74746874 + RSINE1 SINE B4 14 152 -13 4 804 414 0 0 0 chr15 28748102 28748148 -74746826 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 804 315 325 70 42 chr15 28748341 28748556 -74746418 + Charlie10 DNA MER1_type 99 319 -2503 4 804 268 316 85 34 chr15 28748574 28748810 -74746164 + Charlie10 DNA MER1_type 2050 2297 -525 4 804 384 301 39 0 chr15 28749066 28749169 -74745805 + B1_Mur1 SINE Alu 2 108 -41 4 804 315 184 0 0 chr15 28751004 28751091 -74743883 + (TCTCTG)n Simple_repeat Simple_repeat 4 90 0 4 804 214 280 0 0 chr15 28751091 28751141 -74743833 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 4 804 407 322 40 150 chr15 28753341 28753740 -74741234 - ORR1E LTR MaLR -4 355 1 4 804 282 316 10 59 chr15 28754360 28754461 -74740513 - LFSINE_Vert SINE SINE -357 102 7 4 804 622 164 7 7 chr15 28754655 28754802 -74740172 + (CA)n Simple_repeat Simple_repeat 2 148 0 4 804 209 321 86 0 chr15 28755184 28755265 -74739709 - MIRc SINE MIR -113 155 68 4 804 646 187 583 6 chr15 28755291 28755454 -74739520 + L1Md_F2 LINE L1 373 629 -5987 4 804 34200 56 2 1 chr15 28755451 28760086 -74734888 + L1Md_F2 LINE L1 899 5586 -297 4 804 7919 55 2 1 chr15 28760086 28761081 -74733893 + L1Md_F2 LINE L1 5587 6582 0 4 804 670 165 130 10 chr15 28761106 28761314 -74733660 - Lx9 LINE L1 0 7644 7412 4 804 1399 254 126 25 chr15 28761365 28761501 -74733473 - Lx7 LINE L1 -5 7691 7558 4 804 240 35 0 0 chr15 28761501 28761530 -74733444 + (ATG)n Simple_repeat Simple_repeat 2 30 0 4 804 1399 254 126 25 chr15 28761530 28761910 -74733064 - Lx7 LINE L1 -139 7557 7125 4 804 1974 248 28 22 chr15 28761922 28762467 -74732507 - Lx7 LINE L1 -1515 6181 5634 4 804 3305 64 0 0 chr15 28763071 28763545 -74731429 - L1_Mus1 LINE L1 -565 6002 5529 4 804 3555 77 2 0 chr15 28763543 28764000 -74730974 + L1_Mus1 LINE L1 6080 6537 -30 4 804 21 36 0 0 chr15 28764435 28764463 -74730511 + AT_rich Low_complexity Low_complexity 1 28 0 4 804 451 332 110 31 chr15 28764984 28765510 -74729464 + Lx8 LINE L1 6466 7473 0 4 804 288 298 23 72 chr15 28766304 28766490 -74728484 - MER3 DNA MER1_type -48 161 2 4 804 180 111 0 0 chr15 28766952 28766979 -74727995 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 804 488 343 24 0 chr15 28768429 28768642 -74726332 + Lx8 LINE L1 6927 7144 -329 4 804 186 277 64 0 chr15 28769294 28769341 -74725633 - MIRb SINE MIR -14 254 205 4 804 216 355 109 29 chr15 28769856 28770242 -74724732 - L2 LINE L2 -763 2656 2240 4 804 434 18 18 0 chr15 28770296 28770351 -74724623 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 804 917 313 30 57 chr15 28770393 28770691 -74724283 - B4A SINE B4 -1 291 2 4 804 539 299 98 39 chr15 28770718 28770972 -74724002 + MLT1B LTR MaLR 3 271 -119 4 804 608 0 14 0 chr15 28770988 28771060 -74723914 + (TC)n Simple_repeat Simple_repeat 2 74 0 4 804 1042 105 7 0 chr15 28771067 28771219 -74723755 - B2_Mm2 SINE B2 -41 154 2 4 804 2330 65 21 24 chr15 28771601 28771782 -74723192 - L1_Mus2 LINE L1 0 6566 6380 4 804 180 111 0 0 chr15 28771782 28771809 -74723165 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 4 804 2330 65 21 24 chr15 28771809 28771960 -74723014 - L1_Mus2 LINE L1 -187 6379 6235 4 804 27 0 0 0 chr15 28772113 28772140 -74722834 + AT_rich Low_complexity Low_complexity 1 27 0 4 804 904 124 0 0 chr15 28772834 28772963 -74722011 + B1_Mus2 SINE Alu 19 147 0 4 804 224 358 0 0 chr15 28773062 28773143 -74721831 + B3 SINE B2 1 81 -135 4 804 380 118 0 14 chr15 28773213 28773282 -74721692 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 804 306 50 0 0 chr15 28773915 28773955 -74721019 - ORR1B1 LTR MaLR -1 393 354 4 804 3494 149 91 31 chr15 28773955 28774053 -74720921 + RMER6A LTR ERVK 1 122 -634 4 804 5882 38 0 0 chr15 28774053 28774756 -74720218 - L1Md_T LINE L1 -3 6579 5877 4 804 3494 149 91 31 chr15 28774756 28775370 -74719604 + RMER6A LTR ERVK 123 756 0 4 804 335 76 7 5 chr15 28775370 28775418 -74719556 - ORR1B1 LTR MaLR -35 359 291 4 804 1402 198 66 28 chr15 28775985 28776271 -74718703 + ORR1B1 LTR MaLR 1 297 -97 4 804 3922 78 50 21 chr15 28776277 28776857 -74718117 + Lx3_Mus LINE L1 6413 7009 0 4 804 303 93 0 0 chr15 28776958 28777001 -74717973 + (TTG)n Simple_repeat Simple_repeat 1 43 0 4 804 286 212 99 12 chr15 28777768 28777849 -74717125 + ORR1B1 LTR MaLR 272 359 0 4 804 379 306 32 0 chr15 28777872 28777996 -74716978 - MER2 DNA MER2_type -84 261 134 4 804 282 29 0 0 chr15 28778276 28778311 -74716663 + (T)n Simple_repeat Simple_repeat 1 35 0 4 804 291 149 27 13 chr15 28778352 28778427 -74716547 + (TA)n Simple_repeat Simple_repeat 2 77 0 4 804 32 0 0 0 chr15 28778478 28778510 -74716464 + AT_rich Low_complexity Low_complexity 1 32 0 4 804 607 343 77 27 chr15 28778544 28778946 -74716028 + Tigger2b DNA MER2_type 305 726 0 4 804 292 311 164 25 chr15 28779049 28779451 -74715523 + L1MC1 LINE L1 5843 6300 -33 4 804 242 159 45 0 chr15 28780258 28780302 -74714672 - MLT2C1 LTR ERVL -2 561 516 4 804 2895 131 55 0 chr15 28780432 28780891 -74714083 + Lx4A LINE L1 6293 6776 -282 4 804 279 266 75 68 chr15 28781594 28781727 -74713247 + MLT1I-int LTR MaLR 126 259 -1128 4 804 21 0 0 0 chr15 28782250 28782271 -74712703 + AT_rich Low_complexity Low_complexity 1 21 0 4 804 228 349 86 40 chr15 28782377 28782529 -74712445 + LTR16B LTR ERVL 105 263 -199 4 804 2254 47 10 20 chr15 28782532 28782833 -74712141 - L1Md_F2 LINE L1 -3 6579 6282 4 804 363 98 0 0 chr15 28782833 28782884 -74712090 + L1Md_T LINE L1 6188 6238 -344 4 804 234 367 29 29 chr15 28782921 28783095 -74711879 + LTR16B LTR ERVL 274 447 -16 4 804 324 227 0 0 chr15 28783358 28783446 -74711528 + CT-rich Low_complexity Low_complexity 2 89 0 4 804 235 277 0 0 chr15 28783494 28783541 -74711433 - ID4_ SINE ID -16 67 21 4 804 838 185 45 6 chr15 28784267 28784446 -74710528 - RLTR28 LTR ERVL -11 513 328 4 804 423 0 0 0 chr15 28784485 28784532 -74710442 + (TTA)n Simple_repeat Simple_repeat 2 48 0 4 804 334 246 14 0 chr15 28784564 28784633 -74710341 - MTEa LTR MaLR -291 88 19 4 804 248 397 85 62 chr15 28784843 28785232 -74709742 + MLT1I LTR MaLR 12 409 -2 4 804 243 169 14 27 chr15 28785412 28785485 -74709489 + GA-rich Low_complexity Low_complexity 5 76 0 4 804 276 111 0 0 chr15 28785609 28785654 -74709320 + (TTA)n Simple_repeat Simple_repeat 1 45 0 4 804 31 0 0 0 chr15 28786833 28786864 -74708110 + AT_rich Low_complexity Low_complexity 1 31 0 4 804 206 346 118 0 chr15 28788684 28788820 -74706154 - MIR SINE MIR -80 182 31 4 804 14111 57 8 1 chr15 28789356 28790801 -74704173 - L1Md_F2 LINE L1 0 6582 5129 4 804 5326 52 1 1 chr15 28790801 28791462 -74703512 - L1Md_F2 LINE L1 -11 6571 5911 4 804 14111 69 3 3 chr15 28791462 28792556 -74702418 - L1Md_F2 LINE L1 -755 5128 4033 4 804 1454 252 86 38 chr15 28793154 28793629 -74701345 - RMER13A LTR ERVK -362 498 1 4 804 450 0 0 0 chr15 28794394 28794444 -74700530 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 804 334 297 25 30 chr15 28795304 28795521 -74699453 - L1MA4 LINE L1 -340 5972 5752 4 804 351 0 0 0 chr15 28795894 28795933 -74699041 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 804 463 203 80 16 chr15 28795964 28796089 -74698885 - RMER12 LTR ERVK -840 482 350 4 804 374 327 194 35 chr15 28796086 28796421 -74698553 + MLT1D LTR MaLR 89 476 -29 4 804 194 345 17 83 chr15 28796429 28796609 -74698365 - L2 LINE L2 -449 2970 2803 4 804 716 146 6 0 chr15 28796723 28796887 -74698087 + (TCTA)n Simple_repeat Simple_repeat 4 168 0 4 804 258 105 0 0 chr15 28797584 28797622 -74697352 + (CCTG)n Simple_repeat Simple_repeat 2 39 0 4 804 250 274 18 48 chr15 28797670 28797835 -74697139 + Lx9 LINE L1 7483 7642 -2 4 804 4911 155 41 1 chr15 28797849 28798840 -74696134 + Lx2B LINE L1 5443 6465 -535 4 804 2385 151 19 5 chr15 28798843 28799257 -74695717 + Lx2B LINE L1 6581 7000 0 4 804 227 79 26 0 chr15 28799733 28799771 -74695203 + (TATG)n Simple_repeat Simple_repeat 2 40 0 4 804 630 311 97 26 chr15 28799824 28800279 -74694695 - L1_Rod LINE L1 -11 5836 5369 4 804 253 82 41 0 chr15 28801189 28801238 -74693736 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 4 804 453 370 25 38 chr15 28801498 28801734 -74693240 - MLT1D LTR MaLR -8 497 265 4 804 524 146 10 0 chr15 28802685 28802781 -74692193 - Lx2B LINE L1 -18 6982 6886 4 804 423 0 0 0 chr15 28802837 28802884 -74692090 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 804 437 201 145 20 chr15 28803745 28803897 -74691077 + RLTR15 LTR ERVK 1 171 -188 5 804 338 314 43 43 chr15 28803897 28804153 -74690821 + RLTR15 LTR ERVK 83 338 -21 5 804 351 216 0 11 chr15 28804886 28804975 -74689999 - Lx7 LINE L1 -4 7692 7605 5 804 6390 195 23 62 chr15 28804993 28806454 -74688520 - RMER12B LTR ERVK 0 1404 1 5 804 1173 221 85 50 chr15 28806460 28806921 -74688053 - Lx7 LINE L1 -101 7595 7119 5 804 3409 184 43 28 chr15 28806923 28807279 -74687695 + Lx5 LINE L1 5376 5725 -1325 5 804 4541 128 25 11 chr15 28807279 28808003 -74686971 + Lx LINE L1 5919 6652 -2 5 804 3409 175 52 16 chr15 28808003 28808049 -74686925 + Lx5 LINE L1 5726 5784 -1266 5 804 4263 41 0 6 chr15 28808049 28808564 -74686410 + L1Md_F2 LINE L1 6070 6581 -1 5 804 3409 175 52 16 chr15 28808564 28809073 -74685901 + Lx5 LINE L1 5785 6310 -740 5 804 502 213 109 0 chr15 28809072 28809219 -74685755 - L1_Mur3 LINE L1 -864 5276 5102 5 804 690 242 57 0 chr15 28809250 28809407 -74685567 - Lx5 LINE L1 -404 6646 6481 5 804 3253 182 31 9 chr15 28809409 28810081 -74684893 - L1_Mur3 LINE L1 -771 5109 4423 5 804 2935 172 46 13 chr15 28810161 28810709 -74684265 - Lx3C LINE L1 -4 6972 6407 5 804 4666 148 16 7 chr15 28810710 28811525 -74683449 + L1_Mur2 LINE L1 4559 5380 -497 5 804 5315 198 40 20 chr15 28811557 28812501 -74682473 - L1_Mur3 LINE L1 -1454 4426 3479 5 804 342 0 0 0 chr15 28812501 28812539 -74682435 + (TTA)n Simple_repeat Simple_repeat 1 38 0 5 804 5315 198 40 20 chr15 28812539 28812972 -74682002 - L1_Mur3 LINE L1 -2402 3478 3021 5 804 306 0 0 0 chr15 28813192 28813226 -74681748 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 804 356 322 26 17 chr15 28815497 28815614 -74679360 - B1_Mur1 SINE Alu -8 141 24 5 804 637 108 213 8 chr15 28815651 28815773 -74679201 - B1_Mus1 SINE Alu -1 147 1 5 804 26 82 0 0 chr15 28817347 28817408 -74677566 + AT_rich Low_complexity Low_complexity 1 61 0 5 804 432 228 0 0 chr15 28817493 28817638 -74677336 + (CA)n Simple_repeat Simple_repeat 2 146 0 5 804 358 75 0 0 chr15 28817686 28817739 -74677235 - L1_Mus2 LINE L1 0 6566 6514 5 804 1044 60 0 7 chr15 28817952 28818087 -74676887 - Lx3A LINE L1 -565 6416 6283 5 804 434 246 22 37 chr15 28818462 28818597 -74676377 - B4A SINE B4 -6 286 154 5 804 1354 73 0 0 chr15 28818788 28818965 -74676009 - L1_Mus1 LINE L1 0 6567 6391 5 804 353 80 0 0 chr15 28818965 28819015 -74675959 + L1_Mm LINE L1 2200 2249 -3634 5 804 446 146 0 12 chr15 28819076 28819159 -74675815 + CT-rich Low_complexity Low_complexity 3 84 0 5 804 249 325 0 12 chr15 28819159 28819240 -74675734 + C-rich Low_complexity Low_complexity 3 82 0 5 804 3096 37 37 0 chr15 28819860 28820242 -74674732 - MTA_Mm LTR MaLR 0 396 1 5 804 301 336 22 102 chr15 28820781 28821056 -74673918 + Charlie4 DNA MER1_type 57 309 -1652 5 804 418 339 25 25 chr15 28821059 28821301 -74673673 - RLTR15 LTR ERVK -47 312 71 5 804 27 29 0 0 chr15 28821800 28821834 -74673140 + AT_rich Low_complexity Low_complexity 1 34 0 5 804 7114 146 48 5 chr15 28821850 28823260 -74671714 - Lx2B LINE L1 -1035 5965 4473 5 804 600 288 124 60 chr15 28824410 28825015 -74669959 - L1MA7 LINE L1 -299 5992 5349 5 804 367 279 218 13 chr15 28825052 28825281 -74669693 - L1MA7 LINE L1 -848 5295 5020 5 804 537 30 0 0 chr15 28827229 28827296 -74667678 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 804 495 157 43 0 chr15 28827306 28827421 -74667553 + GA-rich Low_complexity Low_complexity 1 120 0 5 804 402 268 86 7 chr15 28827782 28827921 -74667053 + Kanga1a DNA Tc2 591 740 -14 5 804 291 244 0 35 chr15 28828293 28828378 -74666596 + L1_Mur3 LINE L1 5194 5275 -605 5 804 461 294 305 12 chr15 28828381 28828545 -74666429 + B3 SINE B2 5 216 0 5 804 2102 241 50 3 chr15 28828559 28829143 -74665831 + L1_Mur3 LINE L1 5255 5865 -15 5 804 6399 192 93 11 chr15 28829238 28830866 -74664108 - Lx4B LINE L1 -20 7038 5324 5 804 3639 38 11 2 chr15 28830934 28831380 -74663594 - L1Md_F3 LINE L1 -2 6582 6133 5 804 930 39 8 0 chr15 28831378 28831506 -74663468 + L1Md_T LINE L1 6454 6582 0 5 804 3955 148 8 8 chr15 28831519 28832222 -74662752 + L1_Mur2 LINE L1 4622 5324 -553 5 804 322 332 81 35 chr15 28832500 28832784 -74662190 + L1M5 LINE L1 4375 4671 -1475 5 804 336 208 83 91 chr15 28833802 28833859 -74661115 + BC1_Mm scRNA scRNA 2 68 -84 5 804 414 0 0 0 chr15 28833859 28833905 -74661069 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 804 336 208 83 91 chr15 28833905 28833979 -74660995 + BC1_Mm scRNA scRNA 69 132 -20 5 804 861 324 61 35 chr15 28834209 28835000 -74659974 + L1M2 LINE L1 3825 4635 -1508 5 804 972 80 0 13 chr15 28835093 28835245 -74659729 - L1_Mus4 LINE L1 -7 6629 6480 5 804 288 247 0 73 chr15 28835383 28835479 -74659495 + L1_Rod LINE L1 4857 4945 -902 5 804 289 340 31 0 chr15 28835492 28835597 -74659377 + B1_Mur4 SINE Alu 3 112 -8 5 100 281 292 0 2 chr15 28835758 28835851 -74659123 + L1M2 LINE L1 5137 5276 -867 5 805 506 283 132 40 chr15 28835879 28836146 -74658828 + L1_Mur3 LINE L1 5363 5654 -226 5 805 684 129 14 54 chr15 28836146 28836293 -74658681 - Lx2 LINE L1 0 6997 6857 5 805 506 283 132 40 chr15 28836293 28836426 -74658548 + L1_Mur3 LINE L1 5655 5800 -80 5 805 4897 72 14 6 chr15 28837220 28837877 -74657097 + L1Md_F2 LINE L1 5920 6581 -1 5 805 25 0 0 0 chr15 28837899 28837924 -74657050 + AT_rich Low_complexity Low_complexity 1 25 0 5 805 1221 307 82 56 chr15 28838549 28839616 -74655358 + L1_Rod LINE L1 2854 3948 -1899 5 805 27 87 0 0 chr15 28839643 28839712 -74655262 + AT_rich Low_complexity Low_complexity 1 69 0 5 805 1635 65 5 5 chr15 28839956 28840174 -74654800 + L1_Mus3 LINE L1 6203 6420 -218 5 805 524 218 45 2 chr15 28840149 28840315 -74654659 + L1_Mur3 LINE L1 4390 4563 -1320 5 805 453 308 0 4 chr15 28841778 28841907 -74653067 + B1_Mur2 SINE Alu 18 142 -7 5 805 547 289 8 15 chr15 28842374 28842504 -74652470 + RSINE1 SINE B4 1 129 -36 5 805 883 259 41 4 chr15 28842512 28842756 -74652218 + Lx5 LINE L1 6795 7047 -3 5 805 487 217 108 0 chr15 28842776 28842905 -74652069 + L1_Mur3 LINE L1 5103 5245 -635 5 805 2808 192 56 92 chr15 28842903 28843473 -74651501 - Lx4B LINE L1 -716 6342 5742 5 805 259 111 0 0 chr15 28843473 28843509 -74651465 - U2 snRNA snRNA -152 36 1 5 805 2808 192 56 92 chr15 28843509 28843781 -74651193 - Lx4B LINE L1 -716 5741 5453 5 805 8782 169 135 18 chr15 28843780 28845278 -74649696 - Lx4B LINE L1 -860 5017 3482 5 805 192 77 0 0 chr15 28845278 28845304 -74649670 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 805 8782 169 135 18 chr15 28845304 28845794 -74649180 - Lx4B LINE L1 -2396 3481 2795 5 805 7514 72 6 0 chr15 28845801 28846835 -74648139 - L1_Mus1 LINE L1 0 6567 5528 5 805 374 38 0 0 chr15 28846834 28846887 -74648087 + MusHAL1 LINE L1 2239 2291 -421 5 805 477 105 0 0 chr15 28846887 28846973 -74648001 + (A)n Simple_repeat Simple_repeat 1 86 0 5 805 390 55 0 35 chr15 28846973 28847030 -74647944 + L1_Mm LINE L1 3478 3532 -2351 5 805 928 140 38 0 chr15 28847022 28847179 -74647795 - Lx4B LINE L1 -3065 2812 2650 5 805 241 240 0 0 chr15 28848572 28848622 -74646352 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 5 805 632 237 0 14 chr15 28849008 28849149 -74645825 + ORR1B1-int LTR MaLR 1371 1509 0 5 805 1362 193 188 15 chr15 28849149 28849485 -74645489 + ORR1B1 LTR MaLR 1 394 0 5 805 274 276 134 88 chr15 28850417 28850588 -74644386 - MLT1A1 LTR MaLR -23 385 207 5 805 259 227 151 54 chr15 28850603 28850696 -74644278 - MLT1A1 LTR MaLR -263 102 1 5 805 479 351 42 38 chr15 28851108 28851434 -74643540 + MER2 DNA MER2_type 1 342 -3 5 805 181 273 90 15 chr15 28853789 28853856 -74641118 + L2b LINE L2 3186 3257 -118 5 805 2610 131 36 14 chr15 28853908 28854349 -74640625 + Lx2 LINE L1 6546 6996 -1 5 805 180 0 0 0 chr15 28854552 28854572 -74640402 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 805 477 0 0 0 chr15 28855704 28855757 -74639217 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 805 460 270 15 31 chr15 28855978 28856108 -74638866 + B1F SINE Alu 12 139 -10 5 805 507 319 22 0 chr15 28857287 28857422 -74637552 + Lx6 LINE L1 7248 7385 -75 5 805 1526 124 112 0 chr15 28857517 28857767 -74637207 + MTB_Mm LTR MaLR 130 407 0 5 805 543 172 24 12 chr15 28857768 28857933 -74637041 + (CA)n Simple_repeat Simple_repeat 2 168 0 5 805 7384 133 20 4 chr15 28857958 28859184 -74635790 + ORR1A2-int LTR MaLR 718 1963 0 5 805 1951 151 12 6 chr15 28859184 28859504 -74635470 + ORR1A2 LTR MaLR 1 322 -5 5 805 432 299 18 23 chr15 28859523 28859742 -74635232 - L1M2 LINE L1 -1328 4815 4598 5 805 509 363 9 9 chr15 28859756 28859970 -74635004 - B3 SINE B2 -2 214 1 5 805 374 252 0 80 chr15 28859979 28860039 -74634935 - L1_Mur3 LINE L1 -1311 4569 4512 5 805 6754 84 36 65 chr15 28860039 28860534 -74634440 - RLTR13D5 LTR ERVK 0 1023 554 5 805 1131 68 0 13 chr15 28860534 28860683 -74634291 - B1_Mus2 SINE Alu 0 147 1 5 805 6754 84 36 65 chr15 28860683 28861241 -74633733 - RLTR13D5 LTR ERVK -470 553 1 5 805 374 252 0 80 chr15 28861241 28861318 -74633656 - L1_Mur3 LINE L1 -1369 4511 4443 5 805 438 294 92 44 chr15 28861817 28862155 -74632819 + L1M3 LINE L1 5471 5824 -365 5 805 23 0 0 0 chr15 28863524 28863547 -74631427 + AT_rich Low_complexity Low_complexity 1 23 0 5 805 7427 79 10 3 chr15 28863581 28864705 -74630269 - L1_Mus1 LINE L1 -1 6566 5435 5 805 896 164 0 12 chr15 28864712 28864885 -74630089 + CT-rich Low_complexity Low_complexity 1 171 0 5 805 1103 88 0 0 chr15 28864885 28865032 -74629942 - B1_Mm SINE Alu 0 147 1 5 805 261 0 0 0 chr15 28865692 28865721 -74629253 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 805 1235 57 0 0 chr15 28867345 28867503 -74627471 + L1_Mus1 LINE L1 6356 6513 -54 5 805 238 50 24 24 chr15 28867538 28867579 -74627395 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 805 210 105 0 0 chr15 28867816 28867854 -74627120 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 805 240 312 16 23 chr15 28867903 28868031 -74626943 + Charlie1a DNA MER1_type 760 886 -569 5 805 24 0 0 0 chr15 28868300 28868324 -74626650 + AT_rich Low_complexity Low_complexity 1 24 0 5 805 31 44 0 0 chr15 28868351 28868396 -74626578 + AT_rich Low_complexity Low_complexity 1 45 0 5 805 492 342 6 47 chr15 28868484 28868632 -74626342 + RSINE1 SINE B4 4 147 -18 5 805 371 21 21 0 chr15 28868632 28868680 -74626294 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 805 492 342 6 47 chr15 28868680 28868700 -74626274 + RSINE1 SINE B4 148 165 0 5 805 504 235 129 31 chr15 28870190 28870383 -74624591 + Lx9 LINE L1 7432 7643 -1 5 805 241 259 17 0 chr15 28870971 28871029 -74623945 + MER2B DNA MER2_type 80 138 -198 5 805 380 295 42 57 chr15 28871156 28871368 -74623606 + MER2 DNA MER2_type 82 290 -55 5 805 228 67 0 0 chr15 28872011 28872041 -74622933 + (TTTTA)n Simple_repeat Simple_repeat 3 32 0 6 805 933 88 79 14 chr15 28872054 28872193 -74622781 - B1_Mus1 SINE Alu 0 148 1 6 805 26 30 0 0 chr15 28872741 28872774 -74622200 + AT_rich Low_complexity Low_complexity 1 33 0 6 805 628 61 0 20 chr15 28873938 28874039 -74620935 - L1Md_F2 LINE L1 -12 6570 6472 6 805 675 294 65 73 chr15 28874258 28874640 -74620334 - Lx4B LINE L1 -10 7048 6670 6 805 761 174 0 7 chr15 28874636 28874775 -74620199 + Lx2B LINE L1 6520 6657 -343 6 805 1538 308 137 84 chr15 28874845 28875231 -74619743 - Lx8 LINE L1 -141 7332 6958 6 805 1048 87 0 0 chr15 28875231 28875369 -74619605 - B1_Mm SINE Alu -9 138 1 6 805 1538 308 137 84 chr15 28875369 28876058 -74618916 - Lx8 LINE L1 -516 6957 6200 6 805 741 306 30 0 chr15 28876456 28876691 -74618283 - Lx9 LINE L1 -633 7011 6770 6 805 653 235 34 17 chr15 28876695 28876933 -74618041 + Lx9 LINE L1 7383 7624 -20 6 805 273 225 138 0 chr15 28877002 28877082 -74617892 + Lx8 LINE L1 7027 7117 -356 6 805 372 346 86 38 chr15 28877735 28877921 -74617053 + LTR16A LTR ERVL 162 356 -95 6 805 2578 198 34 62 chr15 28878603 28879228 -74615746 - Lx4B LINE L1 -10 7048 6442 6 805 207 179 0 0 chr15 28879318 28879357 -74615617 + (CAA)n Simple_repeat Simple_repeat 3 41 0 6 805 558 369 20 0 chr15 28880020 28880215 -74614759 + B3 SINE B2 12 210 -6 6 805 2732 210 54 5 chr15 28880433 28881011 -74613963 - Lx2B LINE L1 -1 6999 6394 6 805 492 48 0 0 chr15 28881416 28881479 -74613495 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 805 3856 59 4 10 chr15 28882768 28883263 -74611711 - L1_Mus2 LINE L1 -2 6564 6073 6 805 21 57 0 0 chr15 28883422 28883457 -74611517 + AT_rich Low_complexity Low_complexity 1 35 0 6 805 180 0 0 0 chr15 28884436 28884456 -74610518 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 6 805 2292 66 3 7 chr15 28884462 28884765 -74610209 - L1_Mus2 LINE L1 -10 6556 6255 6 805 1327 110 0 0 chr15 28884796 28885005 -74609969 - Lx3_Mus LINE L1 0 7009 6801 6 805 225 159 0 0 chr15 28885016 28885060 -74609914 + GA-rich Low_complexity Low_complexity 1 44 0 6 805 4238 105 132 4 chr15 28885060 28885298 -74609676 + Lx3_Mus LINE L1 6035 6348 -661 6 805 2707 91 34 3 chr15 28885298 28885682 -74609292 - MTA_Mm LTR MaLR 0 396 1 6 805 4238 105 132 4 chr15 28885682 28885725 -74609249 + Lx3_Mus LINE L1 6349 6391 -618 6 805 1678 85 28 12 chr15 28885725 28885974 -74609000 + L1_Mus3 LINE L1 6374 6626 -12 6 805 396 0 0 0 chr15 28885974 28886018 -74608956 + (TAA)n Simple_repeat Simple_repeat 1 44 0 6 805 4238 105 132 4 chr15 28886018 28886411 -74608563 + Lx3_Mus LINE L1 6392 6795 -214 6 805 1453 96 0 14 chr15 28887159 28887382 -74607592 - L1_Mur1 LINE L1 -1006 4880 4661 6 805 702 309 22 30 chr15 28887503 28887770 -74607204 + Lx8 LINE L1 7077 7341 -132 6 805 233 146 0 20 chr15 28887868 28887917 -74607057 + (TA)n Simple_repeat Simple_repeat 2 49 0 6 805 1098 54 3 4 chr15 28888002 28888154 -74606820 - L1Md_F2 LINE L1 -322 6260 6109 6 805 678 140 0 0 chr15 28890315 28890429 -74604545 + (CA)n Simple_repeat Simple_repeat 1 114 0 6 805 489 329 22 12 chr15 28890842 28891020 -74603954 - B3 SINE B2 -4 194 14 6 805 3169 160 17 41 chr15 28891089 28891676 -74603298 + L1_Mus3 LINE L1 409 981 -5657 6 805 2072 73 4 7 chr15 28891665 28891939 -74603035 - L1_Mus2 LINE L1 -201 6365 6093 6 805 1523 100 9 4 chr15 28891939 28892170 -74602804 + L1_Mus2 LINE L1 6335 6566 0 6 805 14200 176 233 34 chr15 28892185 28896411 -74598563 + L1_Mus3 LINE L1 961 6175 -822 6 805 280 248 46 46 chr15 28896411 28896442 -74598532 - RLTR43A LTR ERVK -33 331 302 6 805 1559 9 32 5 chr15 28896442 28896881 -74598093 + (GAA)n Simple_repeat Simple_repeat 1 450 0 6 805 280 248 46 46 chr15 28896881 28896978 -74597996 - RLTR43A LTR ERVK -63 301 203 6 805 3840 143 70 40 chr15 28896978 28897725 -74597249 + L1_Mus3 LINE L1 6048 6991 -6 6 805 22 0 0 0 chr15 28897725 28897747 -74597227 + AT_rich Low_complexity Low_complexity 1 22 0 6 805 403 254 41 25 chr15 28898437 28898558 -74596416 + Lx8 LINE L1 6695 6817 -656 6 805 1062 290 59 33 chr15 28898631 28899023 -74595951 - MTD LTR MaLR 0 419 18 6 805 227 322 123 13 chr15 28899434 28899588 -74595386 + Charlie1a DNA MER1_type 321 491 -964 6 805 2955 107 0 2 chr15 28899634 28900046 -74594928 - Lx3_Mus LINE L1 -7 7002 6592 6 805 4780 85 37 55 chr15 28900047 28900823 -74594151 + Lx3_Mus LINE L1 5816 6577 -432 6 805 309 312 113 30 chr15 28900827 28901164 -74593810 + Charlie1a DNA MER1_type 547 911 -544 6 805 1935 235 157 0 chr15 28902019 28902516 -74592458 - RMER15 LTR ERVL 0 575 1 6 805 435 52 0 0 chr15 28902728 28902786 -74592188 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 805 195 42 0 0 chr15 28902894 28902918 -74592056 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 805 4136 29 0 0 chr15 28903142 28903625 -74591349 - L1Md_A LINE L1 0 6582 6100 6 805 325 138 25 0 chr15 28903708 28903788 -74591186 + (TA)n Simple_repeat Simple_repeat 2 83 0 6 805 566 280 14 0 chr15 28903980 28904123 -74590851 - Lx9 LINE L1 -726 6918 6774 6 805 590 212 44 0 chr15 28904123 28904236 -74590738 + ETnERV2-int LTR ERVK 7075 7192 -214 6 805 1438 259 9 0 chr15 28904629 28904949 -74590025 - Lx9 LINE L1 -858 6786 6464 6 805 697 308 193 58 chr15 28904958 28905680 -74589294 - L1M2 LINE L1 -3215 2928 2110 6 805 25 51 0 0 chr15 28906135 28906174 -74588800 + AT_rich Low_complexity Low_complexity 1 39 0 6 805 244 217 67 0 chr15 28906325 28906385 -74588589 + L1MA9 LINE L1 6177 6240 -72 6 805 468 350 19 42 chr15 28906463 28906728 -74588246 - RMER15 LTR ERVL -15 560 302 6 805 21 0 0 0 chr15 28907055 28907076 -74587898 + AT_rich Low_complexity Low_complexity 1 21 0 6 805 430 204 42 42 chr15 28907432 28907575 -74587399 + Lx2B LINE L1 6853 6995 -5 6 805 1241 45 21 43 chr15 28908413 28908579 -74586395 + L1_Mus1 LINE L1 6386 6545 -22 6 805 1062 82 0 52 chr15 28908579 28908733 -74586241 + B1_Mus1 SINE Alu 3 148 0 6 805 1241 45 21 43 chr15 28908733 28908830 -74586144 + L1_Mus1 LINE L1 6546 6567 0 6 805 2756 64 6 0 chr15 28908995 28909339 -74585635 - ORR1A1 LTR MaLR 0 346 1 6 805 2981 95 166 15 chr15 28909729 28910276 -74584698 + RLTR6_Mm LTR ERV1 1 630 -24 6 805 674 363 42 11 chr15 28911049 28911311 -74583663 + B4A SINE B4 13 282 -10 6 805 12194 44 7 15 chr15 28911903 28914401 -74580573 + L1Md_T LINE L1 233 2704 -3179 6 805 8442 25 7 0 chr15 28914397 28915393 -74579581 + L1Md_T LINE L1 4584 5586 -297 6 805 8223 40 1 2 chr15 28915393 28916390 -74578584 + L1Md_T LINE L1 5587 6582 0 6 805 279 0 0 0 chr15 28916946 28916977 -74577997 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 805 558 43 0 0 chr15 28917311 28917380 -74577594 + (TC)n Simple_repeat Simple_repeat 2 70 0 6 805 759 307 64 12 chr15 28917380 28917710 -74577264 - Lx8 LINE L1 -359 7114 6768 6 805 977 266 21 51 chr15 28917713 28918011 -74576963 + MT2B LTR ERVL 285 553 -48 6 805 273 250 0 15 chr15 28918011 28918076 -74576898 + (CATATA)n Simple_repeat Simple_repeat 1 64 0 6 805 192 40 0 0 chr15 28918076 28918101 -74576873 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 805 307 346 18 59 chr15 28918123 28918292 -74576682 - Lx8 LINE L1 -788 6685 6524 6 805 3144 53 8 2 chr15 28919111 28919505 -74575469 + MTA_Mm LTR MaLR 1 396 0 6 805 627 337 65 29 chr15 28920821 28921767 -74573207 + L1_Mur3 LINE L1 1460 2439 -3441 6 805 1527 282 46 16 chr15 28921996 28922449 -74572525 + Lx8 LINE L1 6208 6674 -799 6 805 749 303 82 34 chr15 28922444 28922772 -74572202 + Lx8 LINE L1 6992 7335 -138 6 805 330 138 0 0 chr15 28922780 28922838 -74572136 + (CATA)n Simple_repeat Simple_repeat 1 58 0 6 805 482 276 101 18 chr15 28922947 28923165 -74571809 + L1MA4 LINE L1 5672 5907 -393 6 805 1142 274 98 27 chr15 28923169 28923506 -74571468 + ORR1D2 LTR MaLR 1 361 -9 6 805 21 0 0 0 chr15 28923616 28923637 -74571337 + AT_rich Low_complexity Low_complexity 1 21 0 6 805 369 189 55 0 chr15 28923671 28923835 -74571139 + (TA)n Simple_repeat Simple_repeat 2 174 0 6 805 31 44 0 0 chr15 28923973 28924018 -74570956 + AT_rich Low_complexity Low_complexity 1 45 0 6 805 1015 261 112 18 chr15 28924628 28924968 -74570006 - ORR1D1 LTR MaLR -2 372 1 6 805 270 271 75 0 chr15 28925228 28925335 -74569639 + L1MB7 LINE L1 5788 5902 -272 6 805 358 358 63 31 chr15 28926004 28926226 -74568748 + L1MB7 LINE L1 5927 6155 -19 6 805 446 333 76 6 chr15 28926583 28926740 -74568234 + B3A SINE B2 1 168 -30 6 805 422 61 15 0 chr15 28926741 28926807 -74568167 + (CA)n Simple_repeat Simple_repeat 2 68 0 6 805 213 94 0 0 chr15 28927824 28927856 -74567118 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 805 338 336 60 20 chr15 28928858 28929007 -74565967 - HAL1-3A_ME LINE L1 -419 2439 2285 6 805 261 167 0 0 chr15 28929007 28929061 -74565913 + CT-rich Low_complexity Low_complexity 1 54 0 6 805 234 270 63 0 chr15 28929734 28929797 -74565177 - ID4 SINE ID -14 69 3 6 805 4654 145 85 20 chr15 28930087 28930944 -74564030 + Lx4A LINE L1 5823 6735 -323 6 805 3055 80 10 2 chr15 28930945 28931348 -74563626 - MTB_Mm LTR MaLR -1 406 1 6 805 2407 174 88 40 chr15 28931348 28931485 -74563489 - MTB_Mm-int LTR MaLR 0 1098 960 6 805 1989 142 3 3 chr15 28931485 28931803 -74563171 + Lx2 LINE L1 6678 6995 -2 6 805 2407 174 88 40 chr15 28931803 28932187 -74562787 - MTB_Mm-int LTR MaLR -139 959 552 6 805 1190 118 99 60 chr15 28932173 28932369 -74562605 - MTB_Mm-int LTR MaLR -836 262 58 6 805 2991 78 5 2 chr15 28932369 28932768 -74562206 - MTB LTR MaLR 0 400 1 6 805 1190 118 99 60 chr15 28932768 28932823 -74562151 - MTB_Mm-int LTR MaLR -1041 57 1 6 805 2862 107 7 2 chr15 28932823 28933228 -74561746 - MTB_Mm LTR MaLR 0 407 1 6 805 1943 136 16 3 chr15 28933228 28933538 -74561436 + Lx4A LINE L1 6743 7056 -2 6 805 183 156 0 0 chr15 28933565 28933597 -74561377 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 805 281 83 24 12 chr15 28934738 28934803 -74560171 - L1_Mus2 LINE L1 0 6582 6512 6 805 332 77 0 19 chr15 28935660 28935713 -74559261 + (TC)n Simple_repeat Simple_repeat 1 52 0 6 805 383 52 0 17 chr15 28935713 28935772 -74559202 + (TA)n Simple_repeat Simple_repeat 1 58 0 6 805 311 331 14 29 chr15 28937076 28937216 -74557758 + B1F SINE Alu 5 142 -7 6 805 7393 158 16 19 chr15 28937592 28938785 -74556189 - L1_Mur2 LINE L1 -775 5102 3913 6 805 4751 183 50 6 chr15 28938785 28939701 -74555273 + RMER17B LTR ERVK 2 958 0 6 805 7393 158 16 19 chr15 28939701 28939910 -74555064 - L1_Mur2 LINE L1 -1965 3912 3704 6 805 283 146 73 0 chr15 28939920 28939975 -74554999 + RMER17B LTR ERVK 1 59 -899 6 805 3418 151 30 11 chr15 28939969 28940666 -74554308 - RMER17B LTR ERVK -41 917 1 6 805 3412 111 20 7 chr15 28940721 28941282 -74553692 - MusHAL1 LINE L1 -282 2430 1863 6 805 6978 135 16 7 chr15 28941282 28942664 -74552310 + Lx LINE L1 5259 6651 -3 6 805 924 164 46 0 chr15 28942688 28942842 -74552132 + B2_Mm2 SINE B2 2 161 -32 7 805 297 0 0 0 chr15 28942842 28942875 -74552099 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 7 805 754 245 43 21 chr15 28942875 28942908 -74552066 + B2_Mm1t SINE B2 162 193 0 7 805 497 202 32 2 chr15 28943578 28943725 -74551249 + ORR1B1 LTR MaLR 1 190 -204 7 805 353 207 0 11 chr15 28943789 28943877 -74551097 + (TG)n Simple_repeat Simple_repeat 2 88 0 7 805 444 240 79 61 chr15 28944010 28944174 -74550800 + RMER5 LTR ERV1 338 504 -30 7 805 3900 68 0 42 chr15 28944229 28944754 -74550220 + RLTR1C LTR ERV1 1 503 0 7 805 3148 55 24 7 chr15 28944863 28945282 -74549692 + L1Md_F2 LINE L1 6157 6582 0 7 805 270 0 0 0 chr15 28945298 28945328 -74549646 + (A)n Simple_repeat Simple_repeat 1 30 0 7 805 442 225 0 11 chr15 28945328 28945418 -74549556 - B1F2 SINE Alu -59 90 2 7 805 1391 289 62 38 chr15 28945456 28945865 -74549109 - ORR1D2-int LTR MaLR -755 615 208 7 805 1754 164 22 33 chr15 28945865 28946224 -74548750 + RLTR15 LTR ERVK 1 355 -4 7 805 1391 289 62 38 chr15 28946224 28946347 -74548627 - ORR1D2-int LTR MaLR -1163 207 70 7 805 526 262 39 28 chr15 28946459 28946656 -74548318 - ORR1D2 LTR MaLR 0 370 154 7 805 672 207 85 42 chr15 28946692 28946904 -74548070 + RMER5 LTR ERV1 1 221 -313 7 805 24 0 0 0 chr15 28946908 28946932 -74548042 + AT_rich Low_complexity Low_complexity 1 24 0 7 805 1268 250 21 33 chr15 28946933 28947268 -74547706 + RMER5 LTR ERV1 196 526 -8 7 805 239 122 20 0 chr15 28947276 28947325 -74547649 + (TTTTA)n Simple_repeat Simple_repeat 5 54 0 7 805 1878 100 29 0 chr15 28947474 28947753 -74547221 - Lx3B LINE L1 -853 6120 5834 7 805 2714 120 58 68 chr15 28947761 28948262 -74546712 + Lx3B LINE L1 5342 5837 -49 7 805 627 112 0 0 chr15 28948540 28948638 -74546336 + (CATA)n Simple_repeat Simple_repeat 2 99 0 7 805 2135 185 74 89 chr15 28950280 28950821 -74544153 - RMER16 LTR ERVK 0 533 1 7 805 908 65 8 0 chr15 28950866 28950990 -74543984 + (TCCCC)n Simple_repeat Simple_repeat 3 127 0 7 805 432 55 0 0 chr15 28950990 28951045 -74543929 + (TTCC)n Simple_repeat Simple_repeat 2 56 0 7 805 568 238 8 0 chr15 28951231 28951353 -74543621 + RMER5 LTR ERV1 1 123 -411 7 805 466 283 6 25 chr15 28951346 28951509 -74543465 + RMER5 LTR ERV1 370 529 -5 7 805 407 292 75 5 chr15 28952085 28952226 -74542748 - ORR1D2 LTR MaLR -254 140 1 7 805 1666 296 10 7 chr15 28952430 28952848 -74542126 + MTD LTR MaLR 1 419 0 7 805 2250 98 6 0 chr15 28953193 28953510 -74541464 + ORR1A2 LTR MaLR 1 319 -8 7 805 59 38 0 0 chr15 28953912 28953992 -74540982 + AT_rich Low_complexity Low_complexity 1 80 0 7 805 227 162 0 0 chr15 28956571 28956608 -74538366 - RMER15 LTR ERVL -538 37 1 7 805 236 330 22 11 chr15 28956608 28956692 -74538282 - ORR1E LTR MaLR -272 87 3 7 805 279 0 0 0 chr15 28957164 28957195 -74537779 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 805 3601 171 9 21 chr15 28957205 28957867 -74537107 - Lx4B LINE L1 -8 7050 6397 7 805 4665 157 11 27 chr15 28957881 28958699 -74536275 + Lx4B LINE L1 5587 6391 -667 7 805 1010 268 78 37 chr15 28958822 28959449 -74535525 - L1MC1 LINE L1 -369 5964 5312 7 805 287 320 36 66 chr15 28959528 28959695 -74535279 - B4 SINE B4 -119 173 12 7 805 282 267 40 0 chr15 28959751 28959852 -74535122 - L1MC1 LINE L1 -922 5224 5120 7 805 33 56 0 0 chr15 28959901 28959955 -74535019 + AT_rich Low_complexity Low_complexity 1 54 0 7 805 1629 278 80 40 chr15 28960098 28960956 -74534018 - L1MC1 LINE L1 -1355 4791 3899 7 805 1913 326 43 38 chr15 28961293 28962217 -74532757 - Lx8 LINE L1 -163 7310 6382 7 805 724 326 53 8 chr15 28962453 28962809 -74532165 - Lx8 LINE L1 -62 7411 7040 7 805 22 0 0 0 chr15 28964960 28964982 -74529992 + AT_rich Low_complexity Low_complexity 1 22 0 7 805 471 343 92 14 chr15 28965863 28966354 -74528620 - Looper DNA PiggyBac -738 820 292 7 805 234 0 0 0 chr15 28966617 28966643 -74528331 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 806 269 304 60 35 chr15 28967090 28967291 -74527683 + L1MEd LINE L1 596 801 -5318 7 806 213 65 0 0 chr15 28967904 28967935 -74527039 + (CAA)n Simple_repeat Simple_repeat 2 32 0 7 806 531 0 0 0 chr15 28968446 28968505 -74526469 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 806 238 242 16 16 chr15 28968526 28968589 -74526385 - RLTR4_Mm LTR ERV1 -45 697 635 7 806 2605 90 12 37 chr15 28969130 28969534 -74525440 + Lx LINE L1 6258 6651 -3 7 806 29 47 0 0 chr15 28969984 28970027 -74524947 + AT_rich Low_complexity Low_complexity 1 43 0 7 806 21 57 0 0 chr15 28970222 28970257 -74524717 + AT_rich Low_complexity Low_complexity 1 35 0 7 806 21 71 0 0 chr15 28970437 28970479 -74524495 + AT_rich Low_complexity Low_complexity 1 42 0 7 806 21 0 0 0 chr15 28970554 28970575 -74524399 + AT_rich Low_complexity Low_complexity 1 21 0 7 806 252 0 0 0 chr15 28970688 28970716 -74524258 + (TAA)n Simple_repeat Simple_repeat 1 28 0 7 806 520 121 10 20 chr15 28971401 28971502 -74523472 + CT-rich Low_complexity Low_complexity 1 100 0 7 806 249 83 0 0 chr15 28971913 28971949 -74523025 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 7 806 4510 250 63 85 chr15 28971966 28972362 -74522612 - Lx5 LINE L1 -42 7008 6607 7 806 2247 48 14 0 chr15 28972362 28972651 -74522323 - L1Md_T LINE L1 0 6582 6290 7 806 4510 250 63 85 chr15 28972651 28973704 -74521270 - Lx5 LINE L1 -444 6606 5591 7 806 753 194 48 43 chr15 28973706 28973916 -74521058 - Lx5 LINE L1 -482 5395 5185 7 806 260 294 22 50 chr15 28973917 28974096 -74520878 - L1MC3 LINE L1 -15 7770 7597 7 806 1548 298 85 17 chr15 28974368 28975262 -74519712 - L1MA6 LINE L1 -49 6251 5297 7 806 1291 289 110 46 chr15 28976031 28976534 -74518440 - Lx9 LINE L1 -1 7643 7094 7 806 1698 162 18 59 chr15 28976534 28976874 -74518100 + ORR1A4 LTR MaLR 1 326 -3 7 806 1291 289 110 46 chr15 28976874 28976961 -74518013 - Lx9 LINE L1 -551 7093 7015 7 806 233 175 35 0 chr15 28976963 28977020 -74517954 + T-rich Low_complexity Low_complexity 2 60 0 7 806 41 0 0 0 chr15 28977887 28977928 -74517046 + AT_rich Low_complexity Low_complexity 1 41 0 7 806 786 315 172 43 chr15 28978139 28979256 -74515718 - Charlie1a DNA MER1_type -137 1318 64 7 806 2742 59 18 0 chr15 28979375 28979715 -74515259 - ORR1A1 LTR MaLR 0 346 1 7 806 1153 54 0 20 chr15 28980453 28980603 -74514371 + B1_Mm SINE Alu 1 147 0 7 806 207 0 0 0 chr15 28982993 28983016 -74511958 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 7 806 560 174 0 8 chr15 28983581 28983703 -74511271 + (TA)n Simple_repeat Simple_repeat 2 122 0 7 806 644 339 87 33 chr15 28983824 28984344 -74510630 - Lx8 LINE L1 -137 7336 6772 7 806 276 329 150 18 chr15 28985057 28985491 -74509483 - L1MA7 LINE L1 -13 6278 5788 7 806 235 170 67 11 chr15 28985499 28985588 -74509386 + (TA)n Simple_repeat Simple_repeat 1 94 0 7 806 450 309 78 11 chr15 28985588 28985869 -74509105 - L1MA7 LINE L1 -519 5793 5494 7 806 666 73 9 18 chr15 28986231 28986343 -74508631 + (TCCC)n Simple_repeat Simple_repeat 2 112 0 7 806 1837 69 4 0 chr15 28987653 28987898 -74507076 - L1Md_F2 LINE L1 -1 6581 6336 7 806 183 80 0 0 chr15 28988050 28988075 -74506899 + (T)n Simple_repeat Simple_repeat 1 25 0 7 806 811 19 0 0 chr15 28988083 28988191 -74506783 - L1Md_T LINE L1 0 6582 6475 7 806 689 275 61 36 chr15 28989266 28989462 -74505512 + B3 SINE B2 8 208 -8 7 806 441 0 0 0 chr15 28989989 28990038 -74504936 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 7 806 1081 59 0 0 chr15 28990039 28990175 -74504799 - B1_Mus1 SINE Alu -12 136 1 7 806 438 329 21 14 chr15 28990613 28990755 -74504219 - B3A SINE B2 -48 150 8 7 806 1754 222 71 29 chr15 28990967 28991388 -74503586 - Lx2B LINE L1 -6 6994 6556 7 806 336 272 98 13 chr15 28991492 28991645 -74503329 - L1MC3 LINE L1 -378 7407 7242 7 806 240 252 148 0 chr15 28991972 28992087 -74502887 - L1MC3 LINE L1 -1379 6406 6275 7 806 1411 195 23 32 chr15 28992283 28992591 -74502383 + RMER4A LTR ERVK 1 305 -161 7 806 508 209 122 0 chr15 28992599 28992714 -74502260 - RMER4A LTR ERVK -61 405 277 7 806 294 231 21 21 chr15 28993416 28993509 -74501465 - L1MC3 LINE L1 -409 5924 5832 7 806 21 0 0 0 chr15 28993675 28993696 -74501278 + AT_rich Low_complexity Low_complexity 1 21 0 7 806 370 314 68 26 chr15 28994447 28994712 -74500262 - L1MC LINE L1 -1484 4662 4387 7 806 1342 297 61 6 chr15 28995129 28995637 -74499337 - Lx9 LINE L1 -2 7642 7107 7 806 315 0 0 0 chr15 28995912 28995947 -74499027 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 806 329 320 124 39 chr15 28995953 28996187 -74498787 - Lx9 LINE L1 -215 7429 7176 7 806 25 31 0 0 chr15 28996480 28996512 -74498462 + AT_rich Low_complexity Low_complexity 1 32 0 7 806 420 355 50 32 chr15 28998188 28998470 -74496504 + RMER15 LTR ERVL 275 561 -14 7 806 405 0 0 0 chr15 28998778 28998823 -74496151 + (TC)n Simple_repeat Simple_repeat 2 46 0 7 806 183 129 0 0 chr15 28998823 28998853 -74496121 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 806 2062 233 42 58 chr15 29000030 29000600 -74494374 - Lx3C LINE L1 -45 6931 6371 1 806 319 256 55 11 chr15 29000961 29001052 -74493922 - RLTR25B LTR ERVK -500 528 434 2 806 485 207 0 0 chr15 29000975 29001062 -74493912 - MT2B LTR ERVL -333 268 182 3 806 563 141 111 0 chr15 29001048 29001147 -74493827 - RMER6C LTR ERVK -580 110 1 4 806 7473 81 2 2 chr15 29002344 29003105 -74491869 + L1Md_F2 LINE L1 5587 6347 -235 5 806 194 0 0 37 chr15 29003105 29003132 -74491842 + (CCCCCA)n Simple_repeat Simple_repeat 2 27 0 6 806 7473 81 2 2 chr15 29003132 29003382 -74491592 + L1Md_F2 LINE L1 6348 6582 0 5 806 309 51 0 0 chr15 29003871 29003910 -74491064 + (TTCC)n Simple_repeat Simple_repeat 2 40 0 7 806 280 398 0 0 chr15 29003910 29004008 -74490966 - BC1_Mm scRNA scRNA -54 98 1 8 806 269 26 26 0 chr15 29004071 29004109 -74490865 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 9 806 213 65 0 0 chr15 29004190 29004221 -74490753 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1 806 423 0 0 0 chr15 29006467 29006514 -74488460 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 806 1005 149 52 0 chr15 29008533 29008727 -74486247 - Lx3A LINE L1 -8 6973 6770 1 806 440 0 0 77 chr15 29008727 29008792 -74486182 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 806 25 95 0 0 chr15 29010416 29010490 -74484484 + AT_rich Low_complexity Low_complexity 1 74 0 1 806 396 0 0 0 chr15 29010661 29010705 -74484269 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 806 647 98 10 0 chr15 29011450 29011552 -74483422 + L1_Mus2 LINE L1 6462 6564 -2 1 806 1637 135 38 45 chr15 29011670 29011962 -74483012 - Lx4B LINE L1 -1394 5664 5370 1 806 3354 95 0 2 chr15 29011962 29012417 -74482557 + L1_Mus4 LINE L1 6174 6627 -9 1 806 581 296 165 0 chr15 29012650 29012917 -74482057 - Lx8 LINE L1 -557 6916 6606 1 806 196 364 33 22 chr15 29014995 29015085 -74479889 + L4 LINE RTE 1455 1545 -484 2 806 290 360 26 0 chr15 29015679 29015793 -74479181 - B4A SINE B4 -173 119 3 2 806 1082 265 107 17 chr15 29016290 29016636 -74478338 - MTE2b LTR MaLR -2 377 1 2 806 327 78 0 0 chr15 29017449 29017500 -74477474 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 2 806 405 0 0 0 chr15 29017503 29017548 -74477426 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 806 4446 120 75 0 chr15 29018327 29019045 -74475929 + Lx2 LINE L1 6226 6997 0 2 806 369 0 0 0 chr15 29019437 29019478 -74475496 + (TTA)n Simple_repeat Simple_repeat 2 42 0 2 806 2763 166 73 35 chr15 29019478 29020076 -74474898 - Lx4A LINE L1 -13 7045 6428 2 806 462 36 0 0 chr15 29021016 29021072 -74473902 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 806 333 0 0 0 chr15 29021777 29021814 -74473160 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 806 279 333 29 7 chr15 29022315 29022451 -74472523 - MLT1B LTR MaLR -241 149 11 3 806 687 128 181 21 chr15 29022858 29023002 -74471972 - L1_Mus2 LINE L1 0 6566 6400 3 806 735 278 15 25 chr15 29023292 29023491 -74471483 - ORR1D2 LTR MaLR -163 207 11 3 806 282 267 139 0 chr15 29024015 29024116 -74470858 + ORR1D2 LTR MaLR 9 123 -247 3 806 560 305 89 42 chr15 29024245 29024481 -74470493 - ORR1E LTR MaLR -109 250 4 3 806 385 306 132 40 chr15 29025205 29025477 -74469497 - RLTR12B LTR ERVK -190 338 42 3 806 578 178 119 0 chr15 29025556 29025674 -74469300 - B1_Mus1 SINE Alu -14 134 3 3 806 521 319 59 88 chr15 29025879 29026346 -74468628 - RMER13A LTR ERVK -28 599 96 3 806 415 70 0 0 chr15 29026596 29026653 -74468321 - L1Md_F2 LINE L1 -620 5962 5906 3 806 4074 66 8 13 chr15 29026655 29027191 -74467783 + L1Md_F2 LINE L1 6038 6570 -12 3 806 1197 287 67 9 chr15 29027501 29027842 -74467132 - ORR1D2 LTR MaLR -4 366 6 3 806 207 0 0 0 chr15 29030223 29030246 -74464728 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 806 934 118 7 0 chr15 29030285 29030421 -74464553 - B1_Mm SINE Alu 0 147 11 4 806 629 274 131 9 chr15 29030445 29030666 -74464308 - B4A SINE B4 -32 260 13 4 806 191 36 36 0 chr15 29031485 29031513 -74463461 + (TTC)n Simple_repeat Simple_repeat 2 30 0 4 806 281 204 37 0 chr15 29031516 29031570 -74463404 - MTE2a LTR MaLR -55 324 269 4 806 206 267 0 39 chr15 29032101 29032179 -74462795 + CT-rich Low_complexity Low_complexity 2 76 0 4 806 204 97 0 0 chr15 29032903 29032934 -74462040 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 806 853 175 58 9 chr15 29032934 29033159 -74461815 + Lx9 LINE L1 7408 7643 -1 4 806 467 17 17 0 chr15 29033564 29033624 -74461350 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 806 477 0 0 0 chr15 29034102 29034155 -74460819 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 806 1086 330 23 25 chr15 29035271 29035753 -74459221 - Lx7 LINE L1 -398 7298 6818 5 806 3205 113 2 2 chr15 29036127 29036604 -74458370 + Lx LINE L1 6178 6654 0 5 806 514 275 65 11 chr15 29036690 29036874 -74458100 - Lx4B LINE L1 0 7058 6865 5 806 21 36 0 0 chr15 29037268 29037296 -74457678 + AT_rich Low_complexity Low_complexity 1 28 0 5 806 26 0 0 0 chr15 29037626 29037652 -74457322 + AT_rich Low_complexity Low_complexity 1 26 0 5 806 191 243 25 75 chr15 29039461 29039541 -74455433 - L3 LINE CR1 -1961 2528 2453 5 806 2031 211 43 5 chr15 29039614 29040037 -74454937 + BGLII_B LTR ERVK 3 441 0 5 806 29 106 0 0 chr15 29040797 29040910 -74454064 + AT_rich Low_complexity Low_complexity 1 113 0 5 806 2774 133 44 17 chr15 29041078 29041560 -74453414 - Lx2 LINE L1 -35 6962 6468 5 806 1820 136 8 2 chr15 29041559 29041866 -74453108 + Lx2 LINE L1 6187 6482 -568 5 806 26 0 0 0 chr15 29043274 29043300 -74451674 + AT_rich Low_complexity Low_complexity 1 26 0 5 806 251 333 0 0 chr15 29043568 29043655 -74451319 - Lx7 LINE L1 -12 7684 7598 6 806 201 69 0 0 chr15 29044132 29044144 -74450830 + (TA)n Simple_repeat Simple_repeat 2 13 0 6 806 369 0 0 0 chr15 29044144 29044185 -74450789 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 806 201 69 0 0 chr15 29044185 29044201 -74450773 + (TA)n Simple_repeat Simple_repeat 2 17 0 6 806 1140 119 0 0 chr15 29045354 29045531 -74449443 + (CA)n Simple_repeat Simple_repeat 1 177 0 6 806 267 57 69 28 chr15 29045565 29045637 -74449337 + (TTTG)n Simple_repeat Simple_repeat 3 77 0 6 806 1074 51 29 0 chr15 29045637 29045775 -74449199 - B1_Mus1 SINE Alu 0 148 7 6 806 351 0 0 0 chr15 29046064 29046103 -74448871 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 6 806 312 27 0 0 chr15 29046103 29046140 -74448834 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 6 806 414 388 0 12 chr15 29046141 29046303 -74448671 - RSINE1 SINE B4 -3 162 3 6 806 486 299 7 34 chr15 29046777 29046926 -74448048 - B1F2 SINE Alu -1 148 4 7 806 366 85 0 0 chr15 29047229 29047288 -74447686 + (A)n Simple_repeat Simple_repeat 1 59 0 7 806 643 192 88 29 chr15 29048392 29048597 -74446377 - L1_Mur3 LINE L1 -1328 4552 4328 7 806 183 205 0 0 chr15 29048723 29048762 -74446212 + (TA)n Simple_repeat Simple_repeat 1 39 0 7 806 589 242 30 15 chr15 29048903 29049100 -74445874 - L1_Mur3 LINE L1 -1686 4194 3995 7 806 2817 179 16 41 chr15 29049114 29049832 -74445142 - Lx4B LINE L1 -710 6348 5691 7 806 346 274 91 70 chr15 29050335 29050578 -74444396 - L1M2 LINE L1 -1946 4197 3919 7 806 532 163 0 0 chr15 29050914 29051000 -74443974 - BC1_Mm scRNA scRNA -66 86 1 7 806 1922 144 3 38 chr15 29052043 29052390 -74442584 - Lx LINE L1 0 6654 6320 7 806 22 35 0 0 chr15 29053238 29053267 -74441707 + AT_rich Low_complexity Low_complexity 1 29 0 7 806 1136 284 97 0 chr15 29053345 29053504 -74441470 - MTEa LTR MaLR -2 377 208 7 806 546 16 0 0 chr15 29053504 29053567 -74441407 + (GA)n Simple_repeat Simple_repeat 2 64 0 8 806 1136 284 97 0 chr15 29053567 29053749 -74441225 - MTEa LTR MaLR -172 207 4 7 806 23 0 0 0 chr15 29053850 29053873 -74441101 + AT_rich Low_complexity Low_complexity 1 23 0 8 806 194 91 30 0 chr15 29054488 29054521 -74440453 + (TA)n Simple_repeat Simple_repeat 2 35 0 8 806 254 313 65 1 chr15 29055613 29055741 -74439233 + Lx7 LINE L1 7578 7696 0 8 806 274 139 0 0 chr15 29057257 29057300 -74437674 + MTEa LTR MaLR 72 114 -265 8 806 497 271 105 47 chr15 29057315 29057505 -74437469 + MTEa LTR MaLR 177 377 -2 8 806 3152 72 2 47 chr15 29057530 29057994 -74436980 - L1Md_F2 LINE L1 -3 6579 6137 8 806 4070 141 73 102 chr15 29058025 29058958 -74436016 + RMER17A2 LTR ERVK 1 906 0 8 806 1797 110 3 33 chr15 29058964 29059265 -74435709 - RMER17A2 LTR ERVK -607 299 8 8 806 773 147 0 35 chr15 29059275 29059444 -74435530 + GA-rich Low_complexity Low_complexity 2 164 0 8 806 6066 79 10 3 chr15 29059496 29060581 -74434393 + L1_Mus2 LINE L1 5283 6380 -186 8 806 2376 100 78 13 chr15 29060581 29060967 -74434007 + IAPLTR2a LTR ERVK 1 411 0 9 806 295 53 0 0 chr15 29060969 29061007 -74433967 + tRNA-Phe-TTY tRNA tRNA 39 76 0 9 806 2347 105 78 13 chr15 29061009 29061395 -74433579 - IAPLTR2_Mm LTR ERVK 0 411 1 9 806 5715 62 12 19 chr15 29061395 29062146 -74432828 - IAPEz-int LTR ERVK 0 6481 5736 9 806 2128 86 0 0 chr15 29062145 29062423 -74432551 - IAPEz-int LTR ERVK -4845 1636 1359 9 806 3428 65 18 22 chr15 29062423 29063070 -74431904 - IAPEz-int LTR ERVK -5819 662 94 9 806 227 267 0 0 chr15 29063073 29063118 -74431856 - RLTR27 LTR ERVK -34 275 231 9 806 483 95 78 186 chr15 29063118 29063247 -74431727 - IAPEz-int LTR ERVK -6358 123 9 9 806 2424 118 117 5 chr15 29063248 29063675 -74431299 - IAPLTR2_Mm LTR ERVK 0 475 1 9 806 1376 68 5 5 chr15 29063675 29063867 -74431107 + L1_Mus2 LINE L1 6375 6566 0 9 806 736 239 95 27 chr15 29063890 29064152 -74430822 - Lx7 LINE L1 -8 7688 7409 9 806 27 62 0 0 chr15 29064656 29064704 -74430270 + AT_rich Low_complexity Low_complexity 1 48 0 9 806 2005 315 47 25 chr15 29065087 29065930 -74429044 - Lx9 LINE L1 -176 7468 6607 9 806 21 0 0 0 chr15 29066806 29066827 -74428147 + AT_rich Low_complexity Low_complexity 1 21 0 9 806 21 0 0 0 chr15 29067937 29067958 -74427016 + AT_rich Low_complexity Low_complexity 1 21 0 9 806 561 292 83 5 chr15 29068630 29068823 -74426151 + Lx8 LINE L1 7062 7269 -204 1 806 429 20 0 0 chr15 29069114 29069164 -74425810 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 806 836 187 54 21 chr15 29069661 29069847 -74425127 - RLTR11A LTR ERVK 0 528 337 1 806 1416 126 0 0 chr15 29069847 29070061 -74424913 - L1_Mus2 LINE L1 0 6566 6353 1 806 1139 193 29 72 chr15 29070097 29070337 -74424637 - RLTR11A LTR ERVK -165 386 118 1 806 2816 54 19 0 chr15 29070337 29070708 -74424266 - L1Md_F2 LINE L1 -2 6580 6203 1 806 1139 179 10 72 chr15 29070708 29070769 -74424205 - RLTR11A LTR ERVK -369 159 65 1 806 3293 154 18 94 chr15 29070776 29071572 -74423402 + RMER17A LTR ERVK 1 735 -16 1 806 351 250 11 22 chr15 29071605 29071695 -74423279 - RLTR11A LTR ERVK -439 89 1 1 806 41 58 0 0 chr15 29072806 29072875 -74422099 + AT_rich Low_complexity Low_complexity 1 69 0 1 806 652 295 54 24 chr15 29073319 29073614 -74421360 - Lx8 LINE L1 -181 7292 6989 1 806 304 396 6 38 chr15 29073665 29073825 -74421149 - RSINE1 SINE B4 -6 159 5 1 806 24 53 0 0 chr15 29073827 29073865 -74421109 + AT_rich Low_complexity Low_complexity 1 38 0 1 806 896 257 30 43 chr15 29074542 29074843 -74420131 - Lx8 LINE L1 -346 7127 6831 1 806 205 205 0 0 chr15 29075215 29075254 -74419720 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 806 30 0 0 0 chr15 29075259 29075289 -74419685 + AT_rich Low_complexity Low_complexity 1 30 0 1 806 677 332 11 0 chr15 29075665 29075852 -74419122 - B3 SINE B2 -27 189 1 1 806 879 322 52 32 chr15 29076090 29076433 -74418541 - ORR1D2 LTR MaLR -16 354 5 1 806 1102 191 59 8 chr15 29076467 29076705 -74418269 + RLTR15 LTR ERVK 106 355 -4 1 806 1353 245 59 31 chr15 29078469 29078696 -74416278 - RMER10B LTR ERVL 0 398 154 1 806 1163 107 6 0 chr15 29078696 29078874 -74416100 + (GAA)n Simple_repeat Simple_repeat 1 179 0 1 806 1353 245 59 31 chr15 29078874 29079033 -74415941 - RMER10B LTR ERVL -245 153 1 1 806 9635 152 29 9 chr15 29079118 29081208 -74413766 + Lx2B LINE L1 4076 6209 -791 1 806 471 221 111 28 chr15 29081183 29081327 -74413647 + Lx2B LINE L1 6826 6981 -19 1 806 1385 278 65 32 chr15 29081381 29082253 -74412721 + MYSERV-int LTR ERVK 3775 4706 -1844 1 806 3446 195 53 44 chr15 29082252 29083088 -74411886 + MYSERV6-int LTR ERVK 8063 8905 -54 1 806 3029 69 38 0 chr15 29083212 29083604 -74411370 + MTB_Mm LTR MaLR 1 407 0 1 806 560 207 68 20 chr15 29083605 29083753 -74411221 + RLTR12B LTR ERVK 58 212 -316 1 806 282 308 109 83 chr15 29083734 29083964 -74411010 - RLTR12B LTR ERVK -52 476 241 1 806 693 173 13 6 chr15 29083964 29084121 -74410853 + CT-rich Low_complexity Low_complexity 5 162 0 1 806 338 143 0 16 chr15 29084633 29084697 -74410277 + GA-rich Low_complexity Low_complexity 4 66 0 1 806 634 210 6 58 chr15 29085445 29085617 -74409357 - Lx2B LINE L1 -1 6999 6837 1 806 423 0 0 0 chr15 29086670 29086717 -74408257 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 806 2500 223 33 4 chr15 29087327 29087872 -74407102 + Lx2B LINE L1 6404 6964 -36 1 806 23 33 0 0 chr15 29087913 29087943 -74407031 + AT_rich Low_complexity Low_complexity 1 30 0 1 806 441 36 0 0 chr15 29088004 29088059 -74406915 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 806 357 336 15 30 chr15 29088116 29088251 -74406723 - B3A SINE B2 -44 154 22 1 806 462 157 0 0 chr15 29089024 29089107 -74405867 + (TG)n Simple_repeat Simple_repeat 2 84 0 1 806 426 327 38 19 chr15 29089294 29089453 -74405521 - RSINE1 SINE B4 0 165 4 1 806 648 293 18 23 chr15 29089478 29089649 -74405325 + MT2A LTR ERVL 243 412 -121 1 806 1196 48 7 0 chr15 29090248 29090394 -74404580 + B1_Mus1 SINE Alu 2 148 0 1 806 333 0 0 0 chr15 29090394 29090431 -74404543 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 1 806 279 175 37 12 chr15 29090593 29090674 -74404300 + CT-rich Low_complexity Low_complexity 1 83 0 1 806 974 113 0 28 chr15 29090674 29090856 -74404118 + (TTC)n Simple_repeat Simple_repeat 3 179 0 1 806 266 217 106 86 chr15 29091414 29091469 -74403505 + Lx8 LINE L1 5738 5785 -1688 1 806 1145 107 44 17 chr15 29091469 29091650 -74403324 + B2_Mm2 SINE B2 2 187 -8 1 806 266 217 106 86 chr15 29091650 29091745 -74403229 + Lx8 LINE L1 5786 5891 -1582 1 806 1621 37 0 0 chr15 29091948 29092139 -74402835 - B2_Mm1a SINE B2 -1 192 2 1 806 474 270 43 0 chr15 29092225 29092340 -74402634 + B3A SINE B2 1 120 -78 1 806 24 32 0 0 chr15 29092380 29092411 -74402563 + AT_rich Low_complexity Low_complexity 1 31 0 1 806 3105 75 28 2 chr15 29092899 29093327 -74401647 + L1_Mus3 LINE L1 6200 6638 0 1 806 3481 101 30 0 chr15 29093500 29094025 -74400949 + Lx3_Mus LINE L1 6468 7008 -1 1 806 1637 294 78 15 chr15 29095564 29096164 -74398810 - Lx5 LINE L1 0 7460 6455 1 806 242 232 73 0 chr15 29096511 29096593 -74398381 - Lx5 LINE L1 -2 7048 6961 1 806 908 177 29 10 chr15 29096595 29096800 -74398174 - L1_Mur3 LINE L1 -509 5371 5163 1 100 19443 2 0 0 chr15 29096867 29099744 -74395230 - L1Md_A LINE L1 0 6582 3707 1 807 2579 189 70 49 chr15 29099744 29100377 -74394597 - L1_Mur3 LINE L1 -135 5745 5100 1 807 5141 170 54 9 chr15 29101076 29102189 -74392785 + Lx4B LINE L1 5798 7038 -20 1 807 1089 212 66 4 chr15 29102269 29102511 -74392463 - Lx7 LINE L1 -344 7352 7096 1 807 909 230 77 0 chr15 29102596 29102831 -74392143 - Lx7 LINE L1 -742 6954 6702 1 807 2952 136 6 4 chr15 29103699 29104180 -74390794 - Lx2 LINE L1 -2 6995 6514 1 807 405 334 101 18 chr15 29104233 29104687 -74390287 - L1MA4A LINE L1 -407 5896 5405 1 807 2348 97 12 0 chr15 29104858 29105197 -74389777 - L1_Mus3 LINE L1 0 6638 6296 1 807 559 309 33 44 chr15 29105347 29105709 -74389265 - L1MA4A LINE L1 -1048 5095 4738 1 807 260 111 22 0 chr15 29106278 29106323 -74388651 + (CATA)n Simple_repeat Simple_repeat 3 48 0 1 807 1975 198 73 0 chr15 29107633 29108016 -74386958 - MTC LTR MaLR -8 413 3 1 807 427 344 0 8 chr15 29108288 29108417 -74386557 + B4A SINE B4 163 290 -2 1 807 210 260 0 0 chr15 29108419 29108492 -74386482 + (CA)n Simple_repeat Simple_repeat 1 73 0 1 807 189 291 0 0 chr15 29108550 29108653 -74386321 + (CA)n Simple_repeat Simple_repeat 2 104 0 1 807 348 331 23 64 chr15 29108943 29109114 -74385860 + RSINE1 SINE B4 2 165 0 1 807 21 82 0 0 chr15 29109117 29109166 -74385808 + AT_rich Low_complexity Low_complexity 1 49 0 1 807 23 33 0 0 chr15 29110318 29110348 -74384626 + AT_rich Low_complexity Low_complexity 1 30 0 1 807 561 76 0 0 chr15 29110377 29110456 -74384518 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 807 448 350 7 7 chr15 29110459 29110597 -74384377 - RSINE1 SINE B4 -14 151 14 1 807 272 200 15 0 chr15 29110934 29110999 -74383975 + (TA)n Simple_repeat Simple_repeat 1 66 0 1 807 299 341 58 65 chr15 29111081 29111357 -74383617 - B4A SINE B4 -18 274 1 1 807 267 370 75 31 chr15 29112476 29112635 -74382339 - Tigger7 DNA MER2_type -2295 196 31 1 807 252 59 0 0 chr15 29112794 29112828 -74382146 + RMER19B LTR ERVK 869 902 0 1 807 1410 314 91 76 chr15 29112853 29113728 -74381246 + Lx8 LINE L1 6333 7215 -258 1 807 906 209 119 0 chr15 29113728 29113929 -74381045 + URR1B DNA MER1_type 1 225 0 1 807 1410 314 91 76 chr15 29113929 29114029 -74380945 + Lx8 LINE L1 7216 7323 -150 1 807 406 273 14 8 chr15 29114060 29114179 -74380795 + PB1D9 SINE Alu 28 150 0 1 807 21 36 0 0 chr15 29114286 29114314 -74380660 + AT_rich Low_complexity Low_complexity 1 28 0 1 807 2265 147 5 10 chr15 29114323 29114714 -74380260 - Lx3B LINE L1 -4 6969 6581 1 807 26 30 0 0 chr15 29114716 29114749 -74380225 + AT_rich Low_complexity Low_complexity 1 33 0 1 807 236 227 30 0 chr15 29114754 29114820 -74380154 + Lx9 LINE L1 7398 7465 -179 1 807 822 140 0 0 chr15 29114834 29115013 -74379961 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 807 303 154 0 0 chr15 29115014 29115079 -74379895 + GA-rich Low_complexity Low_complexity 2 66 0 1 807 1323 286 119 39 chr15 29115268 29115781 -74379193 - Lx6 LINE L1 -267 7193 6640 1 807 457 263 21 63 chr15 29116455 29116597 -74378377 - B4A SINE B4 0 292 157 1 807 234 0 0 0 chr15 29117356 29117382 -74377592 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 807 213 39 0 0 chr15 29117659 29117685 -74377289 + (TATG)n Simple_repeat Simple_repeat 3 28 0 1 807 409 257 143 82 chr15 29117685 29118223 -74376751 + L1M4b LINE L1 2617 3187 -4147 1 807 351 300 99 35 chr15 29118299 29118582 -74376392 + L1M4b LINE L1 3024 3324 -3702 1 807 925 103 15 0 chr15 29118665 29118801 -74376173 - B1_Mus1 SINE Alu 0 148 11 1 807 245 320 30 74 chr15 29120864 29120908 -74374066 - B4A SINE B4 -163 129 1 1 807 266 279 11 55 chr15 29120908 29120999 -74373975 - B2_Mm2 SINE B2 -108 87 1 1 807 194 206 16 0 chr15 29121123 29121186 -74373788 + (CAGAGA)n Simple_repeat Simple_repeat 1 64 0 1 807 423 363 5 16 chr15 29121290 29121483 -74373491 - Lx8 LINE L1 -1092 6381 6191 1 807 23 33 0 0 chr15 29121826 29121856 -74373118 + AT_rich Low_complexity Low_complexity 1 30 0 1 807 835 130 111 0 chr15 29121996 29122158 -74372816 + Lx3B LINE L1 6791 6970 -3 1 807 27 0 0 0 chr15 29122171 29122198 -74372776 + AT_rich Low_complexity Low_complexity 1 27 0 1 807 616 351 69 18 chr15 29122259 29122419 -74372555 + Lx8 LINE L1 6538 6700 -773 1 807 297 0 0 0 chr15 29122419 29122452 -74372522 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 807 616 351 69 18 chr15 29122452 29122683 -74372291 + Lx8 LINE L1 6701 6948 -525 1 807 2647 53 3 0 chr15 29122688 29123028 -74371946 + ORR1A1 LTR MaLR 1 341 -5 1 807 371 333 14 7 chr15 29123043 29123182 -74371792 + Lx8 LINE L1 6955 7094 -379 1 807 225 315 34 110 chr15 29123760 29123906 -74371068 + RMER15 LTR ERVL 346 480 -95 1 807 220 214 57 0 chr15 29125117 29125187 -74369787 + (TATATG)n Simple_repeat Simple_repeat 1 74 0 1 807 3441 73 55 34 chr15 29125355 29125850 -74369124 - L1_Mus2 LINE L1 -2 6564 6060 1 807 21 36 0 0 chr15 29127593 29127621 -74367353 + AT_rich Low_complexity Low_complexity 1 28 0 1 807 596 275 152 0 chr15 29127967 29128138 -74366836 + B3 SINE B2 9 205 -11 1 807 1832 262 35 2 chr15 29128264 29128693 -74366281 - Lx6 LINE L1 -5 7455 7013 1 807 395 244 127 56 chr15 29128706 29128832 -74366142 - Lx6 LINE L1 -713 6747 6613 1 807 241 250 18 0 chr15 29128907 29128963 -74366011 + Lx6 LINE L1 6576 6632 -828 1 807 282 116 0 0 chr15 29129221 29129264 -74365710 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 807 3130 31 8 13 chr15 29131222 29131436 -74363538 - MTA_Mm LTR MaLR 0 396 181 2 807 4155 52 4 0 chr15 29131436 29131937 -74363037 - RLTR1C LTR ERV1 0 503 1 2 807 3130 31 8 13 chr15 29131937 29132120 -74362854 - MTA_Mm LTR MaLR -216 180 1 2 807 8074 55 62 1 chr15 29132120 29133155 -74361819 - MTA_Mm-int LTR MaLR 0 1098 1 2 807 3037 45 48 0 chr15 29133155 29133533 -74361441 - MTA_Mm LTR MaLR 0 396 1 2 807 378 188 0 0 chr15 29133643 29133744 -74361230 + CT-rich Low_complexity Low_complexity 2 102 0 2 807 703 158 0 11 chr15 29133756 29133919 -74361055 + CT-rich Low_complexity Low_complexity 17 177 0 2 807 216 86 0 0 chr15 29133919 29133954 -74361020 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 807 703 158 0 11 chr15 29133954 29133969 -74361005 + polypyrimidine Low_complexity Low_complexity 2 16 0 2 807 337 325 29 29 chr15 29134925 29135096 -74359878 - Lx8 LINE L1 -660 6813 6643 2 807 306 305 11 0 chr15 29135475 29135570 -74359404 + Lx8 LINE L1 6782 6877 -596 2 807 1089 196 98 23 chr15 29135674 29135930 -74359044 - Lx4A LINE L1 -1 7057 6783 2 807 509 380 37 10 chr15 29135943 29136238 -74358736 + Lx8 LINE L1 6927 7229 -244 2 807 461 17 17 0 chr15 29136948 29137006 -74357968 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 807 3205 56 0 5 chr15 29138248 29138646 -74356328 - MTA_Mm LTR MaLR 0 396 1 2 807 650 47 0 11 chr15 29139264 29139351 -74355623 + (TTC)n Simple_repeat Simple_repeat 2 87 0 2 807 1005 97 0 0 chr15 29139353 29139487 -74355487 - B1_Mm SINE Alu -13 134 1 2 807 246 357 0 20 chr15 29139750 29139850 -74355124 + RMER1C Other Other 443 540 -802 2 807 767 301 0 0 chr15 29139885 29140058 -74354916 + RMER1A Other Other 45 217 -813 2 807 264 200 49 24 chr15 29140074 29140156 -74354818 + RMER1A Other Other 944 1027 -3 2 807 213 65 0 0 chr15 29140171 29140202 -74354772 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 807 1659 219 42 44 chr15 29141376 29141759 -74353215 - MTC LTR MaLR -39 382 1 2 807 279 302 66 0 chr15 29141976 29142082 -74352892 - LTR79 LTR ERVL -38 489 377 2 807 407 169 0 0 chr15 29142323 29142406 -74352568 - Lx LINE L1 0 6654 6572 2 807 2482 70 6 6 chr15 29142455 29142787 -74352187 + L1_Mus3 LINE L1 6299 6630 -8 2 807 21 57 0 0 chr15 29142787 29142822 -74352152 + AT_rich Low_complexity Low_complexity 1 35 0 2 807 1103 206 71 55 chr15 29143309 29143617 -74351357 - Lx7 LINE L1 -2 7694 7382 2 807 240 222 0 0 chr15 29143624 29143696 -74351278 + (TA)n Simple_repeat Simple_repeat 1 72 0 2 807 475 320 6 0 chr15 29143752 29143908 -74351066 - Lx7 LINE L1 -363 7333 7177 2 807 1036 232 117 96 chr15 29145157 29145543 -74349431 + ORR1B1 LTR MaLR 1 394 0 2 807 458 177 51 244 chr15 29145584 29145801 -74349173 + ORR1B1-int LTR MaLR 531 705 -1258 2 807 1087 187 12 115 chr15 29145739 29146114 -74348860 + MT2B LTR ERVL 32 281 -320 2 807 979 177 50 0 chr15 29146124 29146305 -74348669 + ORR1B1 LTR MaLR 132 321 -8 2 807 1237 133 10 5 chr15 29146737 29146941 -74348033 - Lx2 LINE L1 -18 6979 6775 2 807 2568 128 5 15 chr15 29146935 29147339 -74347635 - Lx2 LINE L1 -349 6648 6249 2 807 4875 147 3 3 chr15 29147338 29148590 -74346384 + Lx2 LINE L1 5004 6258 -739 2 807 10499 69 7 4 chr15 29149268 29151350 -74343624 - L1Md_F2 LINE L1 0 6582 4501 2 807 352 99 0 27 chr15 29151374 29151447 -74343527 + (TTTTTG)n Simple_repeat Simple_repeat 2 72 0 2 807 520 171 0 8 chr15 29153166 29153284 -74341690 + Lx2 LINE L1 6536 6652 -2 2 807 28 0 0 0 chr15 29153432 29153460 -74341514 + AT_rich Low_complexity Low_complexity 1 28 0 2 807 1027 65 56 21 chr15 29154067 29154209 -74340765 - B1_Mm SINE Alu 0 147 1 2 807 201 195 0 0 chr15 29154384 29154425 -74340549 + T-rich Low_complexity Low_complexity 3 43 0 2 807 996 311 87 23 chr15 29154515 29155158 -74339816 - L1MC1 LINE L1 -99 6234 5551 2 807 633 305 70 20 chr15 29155181 29155382 -74339592 + B3 SINE B2 6 216 0 2 807 983 137 15 108 chr15 29155403 29155607 -74339367 + B2_Mm2 SINE B2 1 185 -10 2 807 296 206 15 0 chr15 29156136 29156204 -74338770 + Lx8 LINE L1 5859 5927 -1546 2 807 504 32 0 0 chr15 29156411 29156473 -74338501 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 807 1692 321 56 29 chr15 29156540 29157381 -74337593 + Lx8 LINE L1 6277 7140 -333 2 807 1985 96 83 46 chr15 29157382 29157730 -74337244 - RLTR10B2 LTR ERVK 0 365 5 2 807 327 24 0 0 chr15 29157755 29157797 -74337177 - RLTR10B LTR ERVK -250 42 1 2 807 379 317 9 9 chr15 29157804 29157909 -74337065 + Lx8 LINE L1 7139 7243 -230 2 807 324 0 0 0 chr15 29158711 29158747 -74336227 + (TAG)n Simple_repeat Simple_repeat 2 37 0 2 807 351 0 0 0 chr15 29158747 29158786 -74336188 + (GAA)n Simple_repeat Simple_repeat 3 41 0 2 807 4901 111 31 43 chr15 29158786 29159518 -74335456 + L1_Mus4 LINE L1 5838 6586 -50 2 807 5119 87 22 8 chr15 29159518 29160234 -74334740 + Lx3_Mus LINE L1 6284 7009 0 2 807 4901 111 31 43 chr15 29160234 29160309 -74334665 + L1_Mus4 LINE L1 6587 6635 -1 2 807 432 121 75 32 chr15 29162287 29162381 -74332593 + Lx LINE L1 6549 6646 -8 2 807 1091 0 29 0 chr15 29162597 29162736 -74332238 + (CA)n Simple_repeat Simple_repeat 2 144 0 2 807 342 0 0 0 chr15 29162907 29162945 -74332029 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 807 3086 169 52 78 chr15 29162978 29163125 -74331849 - RMER1B Other Other 0 1066 936 2 807 6965 113 12 9 chr15 29163125 29164178 -74330796 + Lx3_Mus LINE L1 5946 7001 -8 2 807 3086 169 52 78 chr15 29164178 29164722 -74330252 - RMER1B Other Other -131 935 393 2 807 33 25 0 0 chr15 29164746 29164786 -74330188 + AT_rich Low_complexity Low_complexity 1 40 0 2 807 247 232 28 28 chr15 29165343 29165414 -74329560 + MusHAL1 LINE L1 1310 1380 -1332 2 807 286 211 0 0 chr15 29165415 29165472 -74329502 + L1_Mur3 LINE L1 2662 2718 -3162 2 807 327 146 0 0 chr15 29165489 29165544 -74329430 + (GAAA)n Simple_repeat Simple_repeat 3 57 0 2 807 1466 46 0 0 chr15 29165694 29165868 -74329106 - L1Md_F2 LINE L1 -388 6194 6021 2 807 2660 53 6 0 chr15 29165868 29166206 -74328768 + L1Md_F2 LINE L1 6243 6582 0 2 807 57 97 0 0 chr15 29167651 29167827 -74327147 + AT_rich Low_complexity Low_complexity 1 176 0 2 807 207 265 0 0 chr15 29167867 29167916 -74327058 + (CATA)n Simple_repeat Simple_repeat 2 50 0 2 807 4339 54 0 7 chr15 29168165 29168721 -74326253 + L1Md_F2 LINE L1 6031 6582 0 2 807 330 344 48 30 chr15 29169824 29169992 -74324982 - RMER15 LTR ERVL -3 572 402 2 807 347 327 10 10 chr15 29170202 29170304 -74324670 - RMER15-int LTR ERVL -2 4997 4896 2 807 370 276 20 0 chr15 29170297 29170395 -74324579 - RMER15-int LTR ERVL -674 4325 4226 2 807 204 333 71 57 chr15 29170574 29170714 -74324260 + L3 LINE CR1 3842 3983 -506 2 807 914 342 35 5 chr15 29170717 29171111 -74323863 - RMER15-int LTR ERVL -413 4586 4181 2 807 280 231 0 0 chr15 29171127 29171179 -74323795 - RMER15-int LTR ERVL -2612 2387 2336 2 807 1059 262 33 85 chr15 29171470 29171705 -74323269 + ORR1C2 LTR MaLR 2 227 -157 2 807 1161 62 7 0 chr15 29171705 29171851 -74323123 - B1_Mus1 SINE Alu 0 148 2 2 807 1059 262 33 85 chr15 29171851 29171978 -74322996 + ORR1C2 LTR MaLR 228 345 -39 2 807 808 315 34 34 chr15 29172114 29172466 -74322508 - RMER15-int LTR ERVL -3354 1645 1294 2 807 384 22 0 0 chr15 29172466 29172511 -74322463 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 807 263 273 0 0 chr15 29172640 29172695 -74322279 - B4 SINE B4 -228 64 10 2 807 1016 351 37 32 chr15 29172714 29172847 -74322127 - RMER15-int LTR ERVL -3695 1304 1172 2 807 2672 84 71 5 chr15 29172847 29173242 -74321732 + BGLII LTR ERVK 1 421 0 2 807 1016 351 37 32 chr15 29173242 29173727 -74321247 - RMER15-int LTR ERVL -3828 1171 683 2 807 285 29 0 0 chr15 29175721 29175755 -74319219 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 807 2581 160 9 7 chr15 29175778 29176213 -74318761 - Lx4A LINE L1 -2 7056 6621 2 807 5475 82 3 3 chr15 29176215 29177171 -74317803 + L1_Mus2 LINE L1 5129 6083 -483 2 807 1506 171 49 0 chr15 29177162 29177426 -74317548 - Lx4A LINE L1 -624 6434 6158 2 807 1126 44 0 0 chr15 29177993 29178128 -74316846 + B1_Mus1 SINE Alu 1 135 -13 2 807 252 0 0 0 chr15 29178128 29178156 -74316818 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 2 807 449 306 41 16 chr15 29178628 29178751 -74316223 + RSINE1 SINE B4 1 126 -39 2 807 462 36 0 0 chr15 29178805 29178861 -74316113 + (GGA)n Simple_repeat Simple_repeat 3 58 0 2 807 3036 185 40 48 chr15 29179291 29180061 -74314913 + Lx3C LINE L1 5743 6367 -642 2 807 3071 109 32 9 chr15 29180061 29180238 -74314736 - MT2C_Mm LTR ERVL 0 475 286 2 807 468 0 0 0 chr15 29180238 29180290 -74314684 + (GA)n Simple_repeat Simple_repeat 2 53 0 2 807 3071 109 32 9 chr15 29180290 29180576 -74314398 - MT2C_Mm LTR ERVL -190 285 1 2 807 3036 196 56 27 chr15 29180576 29181181 -74313793 + Lx3C LINE L1 6346 6974 -2 2 807 225 208 42 0 chr15 29181185 29181233 -74313741 + GA-rich Low_complexity Low_complexity 3 52 0 2 807 1015 88 12 17 chr15 29181243 29181416 -74313558 + (GGAGA)n Simple_repeat Simple_repeat 2 173 0 2 807 263 433 0 19 chr15 29181416 29181511 -74313463 - PB1D10 SINE Alu -21 96 2 2 807 4958 69 20 65 chr15 29181514 29182254 -74312720 - L1Md_F2 LINE L1 -10 6572 5866 2 807 2673 56 0 0 chr15 29182254 29182594 -74312380 + L1_Mm LINE L1 3895 4234 -1649 2 807 2540 163 24 94 chr15 29182841 29183469 -74311505 - RLTR31A_Mm LTR ERVK 0 584 1 2 807 396 290 43 47 chr15 29183628 29183860 -74311114 - L1MA6 LINE L1 -131 6169 5939 2 807 685 259 158 18 chr15 29183926 29184382 -74310592 - L1MA6 LINE L1 -482 5818 5299 2 807 758 254 35 0 chr15 29184414 29184615 -74310359 - B3 SINE B2 -6 210 3 2 807 330 26 0 0 chr15 29184781 29184820 -74310154 + (TC)n Simple_repeat Simple_repeat 1 39 0 2 807 501 266 65 0 chr15 29184823 29184947 -74310027 - B1_Mur1 SINE Alu -8 141 10 2 807 321 346 151 20 chr15 29184952 29185297 -74309677 - L1MA6 LINE L1 -1129 5014 4625 2 807 245 154 0 37 chr15 29186539 29186593 -74308381 + (TCTG)n Simple_repeat Simple_repeat 2 53 0 2 807 746 247 6 6 chr15 29186690 29186869 -74308105 - Lx9 LINE L1 -391 7253 7075 2 807 244 167 0 0 chr15 29186875 29186917 -74308057 + Lx9 LINE L1 7289 7330 -314 2 807 2870 128 18 4 chr15 29186948 29187404 -74307570 + Lx3A LINE L1 6518 6979 -2 2 807 2490 207 15 8 chr15 29187438 29187920 -74307054 - RMER19C LTR ERVK -32 579 1 2 807 324 200 18 62 chr15 29187968 29188021 -74306953 + Lx9 LINE L1 7411 7464 -180 2 807 396 0 0 0 chr15 29188021 29188065 -74306909 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 807 324 200 18 62 chr15 29188065 29188123 -74306851 + Lx9 LINE L1 7465 7517 -127 2 807 27 87 0 0 chr15 29188607 29188676 -74306298 + AT_rich Low_complexity Low_complexity 1 69 0 2 807 27 0 0 0 chr15 29188871 29188898 -74306076 + AT_rich Low_complexity Low_complexity 1 27 0 2 807 1036 261 46 34 chr15 29189542 29189867 -74305107 - Lx6 LINE L1 -1215 6245 5917 2 807 7623 94 12 2 chr15 29191254 29192367 -74302607 + L1_Mus4 LINE L1 5489 6631 -5 2 807 281 279 68 130 chr15 29192537 29192698 -74302276 + LTR80A LTR ERVL 44 194 -389 2 807 362 248 32 133 chr15 29192754 29192912 -74302062 + B4A SINE B4 31 172 -120 2 807 666 185 6 24 chr15 29192953 29193119 -74301855 + GA-rich Low_complexity Low_complexity 4 166 0 2 807 490 293 91 53 chr15 29193583 29193925 -74301049 + Lx7 LINE L1 7061 7415 -281 2 807 672 98 0 0 chr15 29193950 29194052 -74300922 + (GA)n Simple_repeat Simple_repeat 1 102 0 2 807 21 36 0 0 chr15 29194133 29194161 -74300813 + AT_rich Low_complexity Low_complexity 1 28 0 2 807 225 0 0 0 chr15 29194297 29194322 -74300652 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 807 368 338 41 89 chr15 29194331 29194500 -74300474 - B3A SINE B2 -35 163 3 3 807 25 31 0 0 chr15 29194568 29194600 -74300374 + AT_rich Low_complexity Low_complexity 1 32 0 3 807 231 300 57 0 chr15 29194915 29194985 -74299989 + PB1D10 SINE Alu 37 110 -7 3 807 227 276 62 62 chr15 29196079 29196288 -74298686 + L1MA5A LINE L1 1020 1228 -5312 3 807 326 367 72 27 chr15 29196617 29196912 -74298062 + L1MA5A LINE L1 1460 1774 -4859 3 807 586 316 77 16 chr15 29197266 29197727 -74297247 + L1MA5A LINE L1 5783 6310 -378 3 807 335 309 27 149 chr15 29197845 29198037 -74296937 - RMER12 LTR ERVK 0 1322 1155 3 807 6949 36 5 5 chr15 29198037 29198893 -74296081 + L1Md_F3 LINE L1 5728 6583 -1 3 807 335 309 27 149 chr15 29198893 29198921 -74296053 - RMER12 LTR ERVK -168 1154 1129 3 807 1107 70 0 14 chr15 29199151 29199297 -74295677 + B1_Mus2 SINE Alu 3 146 -1 3 807 359 21 21 0 chr15 29199297 29199345 -74295629 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 3 807 3140 185 105 52 chr15 29199349 29200236 -74294738 - RMER12 LTR ERVK -187 1135 221 3 807 3904 110 41 9 chr15 29200236 29201141 -74293833 - Lx3B LINE L1 -766 6207 5287 3 807 337 302 60 30 chr15 29201177 29201310 -74293664 + MTD LTR MaLR 117 253 -166 3 807 1712 57 4 9 chr15 29201340 29201572 -74293402 - L1Md_F2 LINE L1 0 6582 6352 3 807 3185 40 0 0 chr15 29201572 29201949 -74293025 + L1Md_F2 LINE L1 5840 6216 -366 3 807 256 211 17 17 chr15 29201954 29202012 -74292962 - ERVL-E-int LTR ERVL -1222 4445 4388 3 807 390 287 7 78 chr15 29202014 29202156 -74292818 + MTD LTR MaLR 250 405 -14 3 807 1254 276 85 117 chr15 29202190 29203126 -74291848 + MTC-int LTR MaLR 40 1311 -269 3 807 931 254 9 9 chr15 29203166 29203377 -74291597 + B3 SINE B2 6 216 0 3 807 3412 153 14 25 chr15 29203620 29204251 -74290723 + Lx3B LINE L1 6344 6967 -6 3 807 30 27 0 0 chr15 29204264 29204301 -74290673 + AT_rich Low_complexity Low_complexity 1 37 0 3 807 21 0 0 0 chr15 29204579 29204600 -74290374 + AT_rich Low_complexity Low_complexity 1 21 0 3 807 1625 265 23 14 chr15 29204600 29205028 -74289946 - Lx6 LINE L1 -15 7445 7014 3 807 1233 113 16 5 chr15 29205035 29205222 -74289752 - B2_Mm2 SINE B2 0 195 7 3 807 592 264 2 2 chr15 29205229 29205402 -74289572 - Lx6 LINE L1 -579 6881 6770 3 807 742 326 0 18 chr15 29205664 29205883 -74289091 + B3 SINE B2 2 216 0 3 807 280 216 111 11 chr15 29205930 29206024 -74288950 + MTE-int LTR MaLR 1500 1580 0 3 807 843 66 22 0 chr15 29206054 29206190 -74288784 + (TG)n Simple_repeat Simple_repeat 1 139 0 3 807 1205 75 12 0 chr15 29206331 29206504 -74288470 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 3 807 339 314 0 62 chr15 29206569 29206715 -74288259 + MTD LTR MaLR 267 403 -16 3 807 772 291 116 13 chr15 29208297 29208600 -74286374 - Lx9 LINE L1 -932 6712 6379 3 807 276 77 0 0 chr15 29208628 29208667 -74286307 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 807 21 0 0 0 chr15 29209126 29209147 -74285827 + AT_rich Low_complexity Low_complexity 1 21 0 3 807 5887 32 18 0 chr15 29209705 29210415 -74284559 + L1Md_F3 LINE L1 5860 6582 -2 3 807 700 263 30 20 chr15 29210801 29210999 -74283975 + Lx6 LINE L1 7250 7449 -11 3 807 208 192 27 14 chr15 29211750 29211824 -74283150 + (CATA)n Simple_repeat Simple_repeat 2 76 0 3 807 524 256 30 15 chr15 29212224 29212355 -74282619 + ORR1D1 LTR MaLR 9 141 -233 3 807 321 118 0 0 chr15 29212528 29212579 -74282395 + (TTA)n Simple_repeat Simple_repeat 1 51 0 3 807 2063 200 52 14 chr15 29212580 29213021 -74281953 - Lx3C LINE L1 -15 6961 6504 3 807 437 134 0 0 chr15 29213014 29213081 -74281893 - Lx3C LINE L1 -1127 5849 5783 3 807 1585 47 0 0 chr15 29213112 29213302 -74281672 - B2_Mm1t SINE B2 -2 191 2 3 807 5159 102 21 5 chr15 29213360 29214162 -74280812 - L1VL2 LINE L1 -627 2988 2174 3 807 3712 35 5 0 chr15 29214162 29214596 -74280378 - RLTR10C LTR ERVK 0 436 1 3 807 8003 41 0 0 chr15 29214596 29215532 -74279442 - MMERVK10C-int LTR ERVK 0 7581 6646 3 807 42064 38 0 1 chr15 29215518 29220462 -74274512 - MMERVK10C-int LTR ERVK -1771 5810 870 3 807 2633 95 53 3 chr15 29220460 29220840 -74274134 - MMERVK10C-int LTR ERVK -7182 399 1 3 807 3759 30 5 0 chr15 29220840 29221274 -74273700 - RLTR10C LTR ERVK 0 436 1 3 807 3994 94 14 14 chr15 29221274 29221899 -74273075 - L1VL2 LINE L1 -1436 2179 1555 3 807 4379 95 53 10 chr15 29221897 29222700 -74272274 - L1VL2 LINE L1 -2466 1149 304 3 807 1556 130 151 0 chr15 29222701 29222985 -74271989 + IAPEY3_LTR LTR ERVK 1 327 -5 3 807 708 187 75 0 chr15 29222988 29223122 -74271852 - L1VL2 LINE L1 -6027 308 165 3 807 246 161 16 31 chr15 29224848 29224912 -74270062 + (CAAA)n Simple_repeat Simple_repeat 1 63 0 3 807 25 0 0 0 chr15 29225190 29225215 -74269759 + AT_rich Low_complexity Low_complexity 1 25 0 3 807 28 48 0 0 chr15 29226123 29226165 -74268809 + AT_rich Low_complexity Low_complexity 1 42 0 3 807 441 189 21 0 chr15 29226170 29226265 -74268709 - Lx3B LINE L1 -2 6971 6875 3 807 847 73 0 0 chr15 29226709 29226833 -74268141 + L1Md_A LINE L1 6459 6582 0 3 807 1804 211 63 8 chr15 29227336 29227732 -74267242 - MTC LTR MaLR -3 418 1 3 807 318 295 80 17 chr15 29227903 29228079 -74266895 - Lx8 LINE L1 -510 6963 6777 3 807 25 51 0 0 chr15 29228191 29228230 -74266744 + AT_rich Low_complexity Low_complexity 1 39 0 3 807 297 0 0 0 chr15 29228453 29228486 -74266488 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 807 897 161 33 33 chr15 29228507 29228687 -74266287 + B2_Mm2 SINE B2 1 180 -15 3 100 5083 101 4 9 chr15 29228687 29229426 -74265548 + Lx3A LINE L1 6241 6975 -6 3 808 31 26 0 0 chr15 29230379 29230417 -74264557 + AT_rich Low_complexity Low_complexity 1 38 0 3 808 22 35 0 0 chr15 29231624 29231653 -74263321 + AT_rich Low_complexity Low_complexity 1 29 0 3 808 1507 51 0 5 chr15 29231655 29231852 -74263122 + L1Md_F2 LINE L1 6376 6571 -11 3 808 828 109 0 0 chr15 29231859 29231978 -74262996 - Lx3C LINE L1 -465 6511 6393 3 808 4770 31 29 0 chr15 29232343 29232925 -74262049 + L1Md_F3 LINE L1 4988 5586 -297 3 808 8008 40 7 2 chr15 29232926 29233917 -74261057 + L1Md_F3 LINE L1 5588 6583 -1 3 808 21 57 0 0 chr15 29235253 29235288 -74259686 + AT_rich Low_complexity Low_complexity 1 35 0 3 808 269 374 120 38 chr15 29235659 29235976 -74258998 - MLT1A0 LTR MaLR -4 361 19 3 808 206 105 26 0 chr15 29237633 29237671 -74257303 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 808 3487 23 0 0 chr15 29238916 29239312 -74255662 + MTA_Mm LTR MaLR 1 396 0 3 808 252 0 0 0 chr15 29239524 29239552 -74255422 + (T)n Simple_repeat Simple_repeat 1 28 0 3 808 494 303 65 11 chr15 29240606 29240883 -74254091 - L1MC4 LINE L1 -475 7567 7276 3 808 26 30 0 0 chr15 29241016 29241049 -74253925 + AT_rich Low_complexity Low_complexity 1 33 0 3 808 387 396 19 6 chr15 29241149 29241309 -74253665 + MTEa LTR MaLR 17 178 -201 3 808 307 291 76 32 chr15 29241338 29241523 -74253451 + MTEa LTR MaLR 164 356 -23 3 808 342 236 14 0 chr15 29241565 29241637 -74253337 + MTE-int LTR MaLR 31 103 -1477 3 808 233 246 59 34 chr15 29241703 29241821 -74253153 + RMER4B LTR ERVK 465 585 0 3 808 766 362 64 44 chr15 29241824 29242231 -74252743 + MTE-int LTR MaLR 297 711 -869 3 808 667 282 47 43 chr15 29242266 29242499 -74252475 - MTEa LTR MaLR -141 238 5 3 808 3786 252 96 108 chr15 29242587 29243323 -74251651 + L1_Mur2 LINE L1 2752 3344 -2533 3 808 2408 77 28 0 chr15 29243323 29243650 -74251324 + L1_Mus1 LINE L1 6232 6567 0 3 808 3786 252 96 108 chr15 29243650 29244916 -74250058 + L1_Mur2 LINE L1 3345 4730 -1147 3 808 4533 137 18 1 chr15 29244921 29245661 -74249313 + L1ME3A LINE L1 5084 5864 -309 3 808 385 208 85 0 chr15 29247492 29247622 -74247352 - Lx9 LINE L1 -106 7538 7398 3 808 258 224 0 0 chr15 29247623 29247681 -74247293 - RMER1C Other Other -55 1287 1230 3 808 425 326 57 48 chr15 29248082 29248311 -74246663 - MTE2a LTR MaLR 0 379 149 3 808 227 309 37 0 chr15 29248335 29248416 -74246558 - MTE2a LTR MaLR -287 92 9 3 808 254 391 101 14 chr15 29248943 29249161 -74245813 - Lx8 LINE L1 -143 7330 7094 3 808 815 119 87 82 chr15 29249502 29249685 -74245289 - B2_Mm2 SINE B2 -8 187 4 3 808 26 0 0 0 chr15 29249835 29249861 -74245113 + AT_rich Low_complexity Low_complexity 1 26 0 3 808 264 30 0 0 chr15 29250807 29250840 -74244134 + (A)n Simple_repeat Simple_repeat 1 33 0 3 808 306 0 0 0 chr15 29251090 29251124 -74243850 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 3 808 209 33 33 0 chr15 29251397 29251427 -74243547 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 808 7524 50 6 2 chr15 29251649 29252588 -74242386 + L1Md_F2 LINE L1 5640 6582 0 3 808 934 127 12 6 chr15 29252712 29252879 -74242095 - L1_Mus4 LINE L1 -1 6635 6468 3 808 2186 121 20 8 chr15 29252881 29253238 -74241736 + L1_Mm LINE L1 5205 5565 -318 3 808 225 0 0 0 chr15 29254292 29254317 -74240657 + (TAAAA)n Simple_repeat Simple_repeat 5 29 0 3 808 729 169 0 0 chr15 29254741 29254901 -74240073 + (CA)n Simple_repeat Simple_repeat 2 161 0 3 808 338 71 0 0 chr15 29254901 29254943 -74240031 + HAL1-3A_ME LINE L1 1974 2015 -843 3 808 258 125 0 0 chr15 29254944 29254992 -74239982 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 808 247 286 0 0 chr15 29255525 29255581 -74239393 - RSINE1 SINE B4 -90 75 20 3 808 21 36 0 0 chr15 29255594 29255622 -74239352 + AT_rich Low_complexity Low_complexity 1 28 0 3 808 3777 112 9 2 chr15 29255626 29256182 -74238792 - L1_Mus3 LINE L1 0 6638 6079 3 808 23 78 0 0 chr15 29256537 29256588 -74238386 + AT_rich Low_complexity Low_complexity 1 51 0 3 808 1312 171 0 0 chr15 29256939 29257155 -74237819 - RMER15 LTR ERVL 0 575 360 3 808 470 155 121 20 chr15 29257155 29257254 -74237720 + L1_Mur2 LINE L1 5129 5237 -640 3 808 21 0 0 0 chr15 29258107 29258128 -74236846 + AT_rich Low_complexity Low_complexity 1 21 0 3 808 480 262 74 64 chr15 29258219 29258626 -74236348 - L1M2 LINE L1 -968 5175 4765 3 808 323 295 31 31 chr15 29258724 29258822 -74236152 + MLT1C LTR MaLR 356 453 -14 3 808 186 43 0 0 chr15 29259556 29259579 -74235395 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 808 1298 294 36 16 chr15 29259581 29259965 -74235009 - MTD LTR MaLR -14 405 14 3 808 293 210 32 16 chr15 29259973 29260036 -74234938 - Lx8 LINE L1 -477 6996 6933 3 808 477 154 0 19 chr15 29260118 29260224 -74234750 + L1_Mus3 LINE L1 6535 6638 0 3 808 2835 82 52 72 chr15 29260974 29261459 -74233515 - IAPLTR2_Mm LTR ERVK 0 475 1 3 808 4131 61 2 0 chr15 29261611 29262134 -74232840 + L1Md_F2 LINE L1 6059 6582 0 3 808 243 0 0 0 chr15 29262858 29262885 -74232089 + (TTA)n Simple_repeat Simple_repeat 1 27 0 3 808 3614 125 14 16 chr15 29262885 29263456 -74231518 - Lx2 LINE L1 -6 6991 6422 4 808 300 232 0 0 chr15 29263557 29263656 -74231318 + (TG)n Simple_repeat Simple_repeat 2 100 0 4 808 452 333 50 50 chr15 29263690 29263889 -74231085 - B3 SINE B2 -12 204 6 4 808 378 61 0 0 chr15 29265135 29265184 -74229790 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 808 391 318 0 57 chr15 29265329 29265469 -74229505 - B1F SINE Alu -7 142 11 4 808 284 396 73 0 chr15 29265704 29265868 -74229106 - MLT1A LTR MaLR -4 370 195 4 808 2357 68 0 0 chr15 29266031 29266325 -74228649 + L1Md_F2 LINE L1 5293 5586 -297 4 808 7643 57 8 9 chr15 29266327 29267320 -74227654 + L1Md_F2 LINE L1 5589 6580 -2 4 808 22 35 0 0 chr15 29267643 29267672 -74227302 + AT_rich Low_complexity Low_complexity 1 29 0 4 808 1042 100 0 11 chr15 29268773 29268955 -74226019 + (GA)n Simple_repeat Simple_repeat 1 180 0 4 808 523 306 34 0 chr15 29269028 29269234 -74225740 + L1_Mur3 LINE L1 4838 5050 -830 4 808 240 352 81 0 chr15 29269616 29269733 -74225241 - B1F SINE Alu -17 132 1 4 808 830 282 78 78 chr15 29269910 29270268 -74224706 + MTEa LTR MaLR 15 372 -7 4 808 9970 212 30 13 chr15 29270935 29274184 -74220790 - Lx5 LINE L1 -5 7045 3744 4 808 1794 227 19 0 chr15 29274163 29274586 -74220388 - Lx5 LINE L1 -3803 2074 1644 4 808 373 280 48 8 chr15 29274586 29274712 -74220262 - RLTR25B LTR ERVK 0 1028 898 4 808 405 207 71 196 chr15 29274696 29274864 -74220110 - RLTR25B LTR ERVK -257 771 625 4 808 8398 27 0 1 chr15 29275258 29276788 -74218186 - L1Md_A LINE L1 0 6582 5054 4 808 38135 48 3 14 chr15 29276788 29283090 -74211884 - L1Md_A LINE L1 0 6582 351 4 808 240 175 0 0 chr15 29283289 29283352 -74211622 + T-rich Low_complexity Low_complexity 1 63 0 4 808 1942 220 18 97 chr15 29283365 29283859 -74211115 - RLTR25B LTR ERVK -573 455 1 4 808 1291 233 61 9 chr15 29283859 29284229 -74210745 - Lx5 LINE L1 -4228 1649 1265 4 808 4153 74 2 2 chr15 29284229 29284815 -74210159 - L1_Mus1 LINE L1 0 6567 6019 4 808 1291 261 54 23 chr15 29284815 29285076 -74209898 - Lx5 LINE L1 -4613 1264 993 4 808 459 0 0 0 chr15 29285656 29285707 -74209267 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 808 368 333 25 61 chr15 29285892 29286055 -74208919 + RMER15 LTR ERVL 296 452 -123 4 808 369 0 0 0 chr15 29286195 29286236 -74208738 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 808 430 326 15 15 chr15 29287044 29287181 -74207793 + ID_B1 SINE B4 84 220 -4 4 808 1143 88 13 0 chr15 29287604 29287763 -74207211 + B2_Mm2 SINE B2 1 161 -34 4 808 378 0 0 0 chr15 29287763 29287805 -74207169 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 4 808 997 176 6 33 chr15 29287805 29287827 -74207147 + B2_Mm1t SINE B2 161 177 -16 4 808 741 287 149 16 chr15 29287868 29288183 -74206791 + ORR1D2 LTR MaLR 14 370 0 4 808 25 51 0 0 chr15 29288233 29288272 -74206702 + AT_rich Low_complexity Low_complexity 1 39 0 4 808 192 40 0 0 chr15 29290192 29290217 -74204757 + (ATTG)n Simple_repeat Simple_repeat 1 25 0 4 808 36 104 0 0 chr15 29290633 29290767 -74204207 + AT_rich Low_complexity Low_complexity 1 134 0 4 808 2125 192 143 45 chr15 29290880 29291508 -74203466 + RMER6C LTR ERVK 1 690 0 4 808 37 62 0 0 chr15 29291531 29291596 -74203378 + AT_rich Low_complexity Low_complexity 1 65 0 4 808 3500 117 23 2 chr15 29291855 29292384 -74202590 - Lx LINE L1 -6 6648 6109 4 808 1193 116 0 0 chr15 29292384 29292556 -74202418 + Lx2 LINE L1 6126 6297 -700 4 808 815 55 9 0 chr15 29292808 29292917 -74202057 + (TTCTC)n Simple_repeat Simple_repeat 1 110 0 4 808 1684 304 24 17 chr15 29293195 29293731 -74201243 - Lx9 LINE L1 -706 6938 6399 4 808 1763 290 79 66 chr15 29293763 29294811 -74200163 + Lx9 LINE L1 4525 5586 -261 4 808 2088 189 36 115 chr15 29294811 29295342 -74199632 - RMER19C LTR ERVK 0 611 123 4 808 801 204 96 33 chr15 29295389 29295652 -74199322 + Lx9 LINE L1 5600 5915 -1729 4 808 815 87 9 0 chr15 29295805 29295920 -74199054 + BGLII_Mus LTR ERVK 271 386 -36 4 808 229 0 26 53 chr15 29295947 29295985 -74198989 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 4 808 38978 36 1 6 chr15 29295987 29302185 -74192789 - L1Md_A LINE L1 -2 6580 417 4 808 368 111 0 0 chr15 29302185 29302239 -74192735 + BGLII_Mus LTR ERVK 369 422 0 4 808 1316 261 103 13 chr15 29302418 29302798 -74192176 - Lx5 LINE L1 -39 7011 6598 4 808 3551 140 19 9 chr15 29302804 29303380 -74191594 - Lx2B LINE L1 -4 6996 6415 4 808 308 163 0 0 chr15 29303380 29303429 -74191545 + Lx2B LINE L1 5649 5697 -1303 4 808 3805 173 109 47 chr15 29303420 29304596 -74190378 - Lx5 LINE L1 -831 6219 4965 4 808 1664 289 80 75 chr15 29304605 29305470 -74189504 - RCHARR1 DNA MER1_type -38 936 75 4 808 1372 29 0 11 chr15 29305470 29305646 -74189328 - L1Md_F3 LINE L1 -13 6571 6398 4 808 1664 289 80 75 chr15 29305646 29305710 -74189264 - RCHARR1 DNA MER1_type -900 74 4 4 808 6528 163 21 12 chr15 29308915 29310461 -74184513 + Lx2B LINE L1 4674 6243 -757 4 808 4500 176 30 13 chr15 29310448 29311541 -74183433 - Lx2B LINE L1 -548 6452 5387 4 808 2036 139 9 0 chr15 29311558 29311882 -74183092 + ORR1A2 LTR MaLR 1 327 0 4 808 8438 170 86 5 chr15 29311882 29313540 -74181434 + ORR1A2-int LTR MaLR 1 1792 0 4 808 822 238 118 79 chr15 29313540 29313855 -74181119 + ORR1A2 LTR MaLR 1 327 0 4 808 5079 245 44 30 chr15 29314981 29316263 -74178711 + Lx6 LINE L1 6162 7460 0 4 808 1634 266 107 21 chr15 29316386 29316696 -74178278 - Lx6 LINE L1 -177 7283 6923 4 808 996 92 0 0 chr15 29316696 29316837 -74178137 + (ATG)n Simple_repeat Simple_repeat 1 141 0 4 808 1634 266 107 21 chr15 29316837 29317049 -74177925 - Lx6 LINE L1 -538 6922 6717 4 808 38 81 0 0 chr15 29317352 29317439 -74177535 + AT_rich Low_complexity Low_complexity 1 87 0 4 808 487 238 38 0 chr15 29317483 29317588 -74177386 + B1_Mur1 SINE Alu 36 144 -5 4 808 193 0 94 0 chr15 29318010 29318042 -74176932 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 4 808 22 0 0 0 chr15 29318654 29318676 -74176298 + AT_rich Low_complexity Low_complexity 1 22 0 4 808 629 190 129 14 chr15 29318841 29318980 -74175994 + RMER12B LTR ERVK 3 157 -1247 4 808 37637 44 4 3 chr15 29319006 29325380 -74169594 - L1Md_T LINE L1 0 6585 107 4 808 4894 190 44 11 chr15 29325380 29326423 -74168551 + RMER12B LTR ERVK 144 1220 -184 4 808 466 302 209 55 chr15 29326721 29327085 -74167889 + MER44B DNA MER2_type 1 420 -130 4 808 21 0 0 0 chr15 29328415 29328436 -74166538 + AT_rich Low_complexity Low_complexity 1 21 0 4 808 233 324 68 10 chr15 29328626 29328729 -74166245 - ORR1E LTR MaLR -250 109 1 4 808 324 355 20 41 chr15 29328775 29328922 -74166052 + RSINE1 SINE B4 3 146 -19 4 808 909 176 22 22 chr15 29329071 29329251 -74165723 + B2_Mm2 SINE B2 1 180 -15 4 808 183 80 0 0 chr15 29329269 29329294 -74165680 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 808 314 309 0 18 chr15 29331134 29331246 -74163728 + GA-rich Low_complexity Low_complexity 2 111 0 4 808 371 216 9 0 chr15 29331407 29331518 -74163456 + (TG)n Simple_repeat Simple_repeat 1 112 0 4 808 702 331 36 40 chr15 29331598 29331872 -74163102 - B4A SINE B4 -14 278 6 4 808 326 242 0 0 chr15 29332412 29332474 -74162500 - ID4 SINE ID -20 63 2 4 808 190 129 0 0 chr15 29333254 29333285 -74161689 - MIRm SINE MIR -1 275 245 4 808 219 139 0 0 chr15 29333630 29333666 -74161308 + (A)n Simple_repeat Simple_repeat 1 36 0 4 808 846 30 0 0 chr15 29335269 29335370 -74159604 + (TG)n Simple_repeat Simple_repeat 2 102 0 4 808 217 351 98 33 chr15 29335444 29335637 -74159337 - B4 SINE B4 -86 206 3 4 808 3091 175 35 112 chr15 29336481 29337261 -74157713 - RMER6D LTR ERVK 0 720 1 4 808 3533 75 4 14 chr15 29337311 29337801 -74157173 + L1Md_F2 LINE L1 6096 6580 -2 4 808 4643 245 153 18 chr15 29338113 29339346 -74155628 + Lx6 LINE L1 5865 7278 -182 4 808 258 106 0 0 chr15 29339346 29339393 -74155581 + (ATTG)n Simple_repeat Simple_repeat 2 48 0 4 808 4643 245 153 18 chr15 29339393 29339551 -74155423 + Lx6 LINE L1 7279 7443 -17 4 808 228 35 0 0 chr15 29339839 29339868 -74155106 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 4 808 961 315 94 35 chr15 29339963 29340403 -74154571 + L1M2 LINE L1 4557 5017 -1126 4 808 1114 151 5 5 chr15 29340403 29340590 -74154384 + B2_Mm2 SINE B2 1 187 -8 4 808 961 315 94 35 chr15 29340590 29340902 -74154072 + L1M2 LINE L1 5018 5354 -789 4 808 444 111 0 0 chr15 29341230 29341302 -74153672 + (CA)n Simple_repeat Simple_repeat 1 72 0 4 808 543 267 58 39 chr15 29341347 29341604 -74153370 + L1M2 LINE L1 5521 5782 -509 4 808 315 146 0 0 chr15 29341613 29341668 -74153306 + (CATA)n Simple_repeat Simple_repeat 1 55 0 4 808 23 0 0 0 chr15 29341740 29341763 -74153211 + AT_rich Low_complexity Low_complexity 1 23 0 4 808 2298 208 51 62 chr15 29341835 29342514 -74152460 - BGLII_B LTR ERVK 0 553 1 4 808 5911 148 34 21 chr15 29342515 29343272 -74151702 - Lx4A LINE L1 -53 7005 6247 4 808 3008 73 2 15 chr15 29343272 29343673 -74151301 - MTA_Mm LTR MaLR 0 396 1 4 808 5911 148 34 21 chr15 29343673 29343945 -74151029 - Lx4A LINE L1 -812 6246 5963 4 808 462 36 0 0 chr15 29344042 29344098 -74150876 + (TC)n Simple_repeat Simple_repeat 2 57 0 4 808 33 0 0 0 chr15 29344385 29344418 -74150556 + AT_rich Low_complexity Low_complexity 1 33 0 4 808 459 281 96 0 chr15 29344430 29344565 -74150409 - B1_Mur3 SINE Alu -1 148 1 4 808 363 136 0 0 chr15 29345915 29345974 -74149000 + (CATA)n Simple_repeat Simple_repeat 4 62 0 4 808 248 193 18 0 chr15 29346026 29346083 -74148891 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 808 21 0 0 0 chr15 29346239 29346260 -74148714 + AT_rich Low_complexity Low_complexity 1 21 0 4 808 366 143 0 0 chr15 29346586 29346663 -74148311 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 0 4 808 10160 137 7 23 chr15 29346995 29349657 -74145317 + L1_Mus4 LINE L1 4026 6631 -5 4 808 268 277 75 30 chr15 29349998 29350132 -74144842 - B1F SINE Alu -8 141 2 4 808 21 57 0 0 chr15 29350135 29350170 -74144804 + AT_rich Low_complexity Low_complexity 1 35 0 4 808 371 169 42 0 chr15 29350288 29350359 -74144615 + URR1B DNA MER1_type 151 224 -1 4 808 275 291 138 20 chr15 29350380 29350583 -74144391 - MER2 DNA MER2_type -87 258 32 4 808 669 302 47 42 chr15 29350752 29350923 -74144051 - B3 SINE B2 -1 215 43 4 808 2975 18 0 0 chr15 29350923 29351260 -74143714 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 808 669 302 47 42 chr15 29351260 29351302 -74143672 - B3 SINE B2 -174 42 1 4 808 378 329 81 64 chr15 29352039 29352176 -74142798 + B4A SINE B4 46 187 -105 4 808 1662 163 24 178 chr15 29352176 29352683 -74142291 - RLTR23 LTR ERV1 -1 429 1 4 808 378 329 81 64 chr15 29352683 29352779 -74142195 + B4A SINE B4 188 283 -9 4 808 1988 103 56 3 chr15 29352808 29353111 -74141863 - ORR1A2 LTR MaLR -8 319 1 5 808 4004 54 2 0 chr15 29353224 29353720 -74141254 + L1_Mus2 LINE L1 6070 6566 0 5 808 22 88 0 0 chr15 29353731 29353788 -74141186 + AT_rich Low_complexity Low_complexity 1 57 0 5 808 2704 124 9 11 chr15 29353842 29354282 -74140692 - Lx2 LINE L1 -2 6995 6557 5 808 223 250 18 0 chr15 29354937 29354993 -74139981 + CT-rich Low_complexity Low_complexity 5 61 0 5 808 212 175 0 34 chr15 29355012 29355071 -74139903 + CT-rich Low_complexity Low_complexity 2 58 0 5 808 23 33 0 0 chr15 29355237 29355267 -74139707 + AT_rich Low_complexity Low_complexity 1 30 0 5 808 993 306 78 45 chr15 29355436 29356080 -74138894 - L1MC3 LINE L1 -154 7631 6967 5 808 254 360 25 59 chr15 29356085 29356203 -74138771 + MLT1A LTR MaLR 9 122 -252 5 808 317 266 75 68 chr15 29356472 29356605 -74138369 - B3A SINE B2 0 216 83 5 808 6721 76 16 0 chr15 29356651 29357530 -74137444 - RLTR13B1 LTR ERVK 0 893 1 5 808 249 299 97 41 chr15 29358121 29358411 -74136563 - L1MC3 LINE L1 -1569 6216 5911 5 808 441 0 0 0 chr15 29358636 29358685 -74136289 + (TTG)n Simple_repeat Simple_repeat 2 50 0 5 808 258 81 0 0 chr15 29359413 29359450 -74135524 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 5 808 1745 143 121 0 chr15 29359455 29359769 -74135205 - Lx2 LINE L1 -6 6991 6640 5 808 21 0 0 0 chr15 29359792 29359813 -74135161 + AT_rich Low_complexity Low_complexity 1 21 0 5 808 24 53 0 0 chr15 29359963 29360001 -74134973 + AT_rich Low_complexity Low_complexity 1 38 0 5 809 425 288 164 63 chr15 29360654 29361250 -74133724 - L1M4b LINE L1 -3986 3348 2727 5 809 1575 208 82 55 chr15 29365170 29365245 -74129729 - RLTR11A LTR ERVK 0 528 448 5 809 414 0 0 0 chr15 29365245 29365291 -74129683 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 809 1575 208 82 55 chr15 29365291 29365729 -74129245 - RLTR11A LTR ERVK -81 447 2 5 809 265 250 0 0 chr15 29365729 29365793 -74129181 + RLTR42-int LTR ERVK 1542 1605 -3917 5 809 291 54 0 0 chr15 29366511 29366548 -74128426 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 809 21 0 0 0 chr15 29366638 29366659 -74128315 + AT_rich Low_complexity Low_complexity 1 21 0 5 809 613 105 38 14 chr15 29368155 29368280 -74126694 - ORR1A3 LTR MaLR -2 327 203 5 809 1323 58 0 0 chr15 29370143 29370366 -74124608 + (TG)n Simple_repeat Simple_repeat 1 223 0 5 809 508 241 87 101 chr15 29370798 29370987 -74123987 - ORR1E LTR MaLR 0 379 182 5 809 266 0 29 0 chr15 29370987 29371021 -74123953 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 809 508 266 149 84 chr15 29371021 29371157 -74123817 - ORR1E LTR MaLR -178 181 9 5 809 3012 73 0 5 chr15 29372455 29372852 -74122122 + MTA_Mm LTR MaLR 1 395 -1 5 809 1203 111 16 6 chr15 29372891 29373073 -74121901 + B2_Mm2 SINE B2 1 184 -11 5 809 7775 84 3 2 chr15 29373461 29374541 -74120433 + L1_Mus4 LINE L1 5587 6636 0 5 809 743 282 0 11 chr15 29374542 29374732 -74120242 + B3 SINE B2 29 216 0 5 809 747 285 22 78 chr15 29376556 29376826 -74118148 - MTEa LTR MaLR -123 256 2 5 809 869 94 0 7 chr15 29377065 29377204 -74117770 + (TA)n Simple_repeat Simple_repeat 2 139 0 5 809 186 43 0 0 chr15 29377657 29377680 -74117294 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 809 249 248 63 40 chr15 29378341 29378467 -74116507 - Lx6 LINE L1 -27 7433 7305 5 809 513 32 0 0 chr15 29378590 29378653 -74116321 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 809 30 45 0 0 chr15 29379157 29379201 -74115773 + AT_rich Low_complexity Low_complexity 1 44 0 5 809 35 71 0 0 chr15 29380114 29380184 -74114790 + AT_rich Low_complexity Low_complexity 1 70 0 5 809 242 309 0 49 chr15 29380633 29380735 -74114239 + CT-rich Low_complexity Low_complexity 2 98 0 5 809 3366 176 55 29 chr15 29380959 29381515 -74113459 + RMER6A LTR ERVK 1 585 -171 5 809 301 0 0 64 chr15 29381515 29381562 -74113412 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 5 809 3366 176 55 29 chr15 29381562 29381694 -74113280 + RMER6A LTR ERVK 586 707 -49 5 809 1237 75 0 0 chr15 29381694 29381854 -74113120 + B2_Mm1t SINE B2 1 160 -33 5 809 186 43 0 0 chr15 29381854 29381877 -74113097 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 5 809 375 140 0 0 chr15 29381896 29381953 -74113021 + RMER6A LTR ERVK 700 756 0 5 809 225 242 0 0 chr15 29382454 29382516 -74112458 + Lx4B LINE L1 5891 5952 -1106 5 809 1389 286 10 16 chr15 29382514 29382967 -74112007 + Lx3C LINE L1 6500 6935 -73 5 809 302 147 10 69 chr15 29382988 29383090 -74111884 + (TATAA)n Simple_repeat Simple_repeat 4 99 0 5 809 336 281 112 32 chr15 29383831 29383956 -74111018 - B1_Mur2 SINE Alu -6 143 9 5 809 1066 73 7 0 chr15 29384093 29384230 -74110744 + B1_Mm SINE Alu 2 139 -8 5 809 204 67 0 0 chr15 29384230 29384260 -74110714 + (CAA)n Simple_repeat Simple_repeat 2 31 0 5 809 4770 98 29 1 chr15 29384273 29384966 -74110008 + Lx3_Mus LINE L1 6283 6994 -15 5 809 23 0 0 0 chr15 29385150 29385173 -74109801 + AT_rich Low_complexity Low_complexity 1 23 0 5 809 1060 299 63 3 chr15 29385324 29385640 -74109334 + MTD LTR MaLR 85 419 0 5 809 935 262 98 63 chr15 29385640 29386279 -74108695 + MTD-int LTR MaLR 2 751 -507 5 809 2172 167 68 7 chr15 29386360 29386463 -74108511 + L1_Mur2 LINE L1 4733 4836 -1041 5 809 939 146 0 0 chr15 29386463 29386621 -74108353 + (GGAA)n Simple_repeat Simple_repeat 4 161 0 5 809 2172 167 68 7 chr15 29386621 29386956 -74108018 + L1_Mur2 LINE L1 4837 5196 -681 5 809 1723 170 18 35 chr15 29387049 29387465 -74107509 - RLTR11B LTR ERVK -6 447 1 5 809 1018 117 7 0 chr15 29387494 29387639 -74107335 + B1_Mus1 SINE Alu 2 147 -1 5 809 4395 94 7 118 chr15 29387645 29388490 -74106484 - RMER17A LTR ERVK 0 751 1 5 809 53 17 0 0 chr15 29388490 29388550 -74106424 + AT_rich Low_complexity Low_complexity 1 60 0 5 809 337 258 44 29 chr15 29388985 29389121 -74105853 + Lx7 LINE L1 7542 7679 -17 5 809 2203 117 3 21 chr15 29389161 29389493 -74105481 - ORR1A3 LTR MaLR 0 326 1 5 809 22 70 0 0 chr15 29390041 29390084 -74104890 + AT_rich Low_complexity Low_complexity 1 43 0 5 809 1661 113 8 4 chr15 29390642 29390908 -74104066 - L1_Mus3 LINE L1 0 6638 6372 5 809 3001 125 9 7 chr15 29390908 29391366 -74103608 + L1_Mus3 LINE L1 5906 6364 -272 5 809 2392 51 13 0 chr15 29391369 29391681 -74103293 + ORR1A0 LTR MaLR 31 346 0 5 809 270 73 0 0 chr15 29392123 29392164 -74102810 + (TTTTTG)n Simple_repeat Simple_repeat 3 43 0 5 809 4442 124 20 46 chr15 29392241 29392927 -74102047 + L1_Mur1 LINE L1 3148 3766 -2120 5 809 2629 79 108 0 chr15 29392927 29393308 -74101666 - BGLII_Mus LTR ERVK 0 422 1 5 809 4442 86 20 14 chr15 29393308 29393549 -74101425 + L1_Mur1 LINE L1 3767 4006 -1880 5 809 255 31 0 0 chr15 29393554 29393586 -74101388 + (T)n Simple_repeat Simple_repeat 1 32 0 5 809 37946 31 0 0 chr15 29393651 29400095 -74094879 - L1Md_T LINE L1 0 6585 45 5 809 31985 93 6 11 chr15 29400657 29405846 -74089128 + L1Md_F2 LINE L1 420 5586 -297 5 809 7850 57 2 0 chr15 29405846 29406828 -74088146 + L1Md_F2 LINE L1 5587 6570 -12 5 809 369 43 0 0 chr15 29406961 29407008 -74087966 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 5 809 718 241 0 0 chr15 29407008 29407141 -74087833 + B1_Mus1 SINE Alu 14 146 -2 5 809 629 248 156 10 chr15 29407801 29408045 -74086929 - RMER20B LTR ERVK -93 423 147 5 809 1062 317 40 49 chr15 29408094 29408645 -74086329 - MERVK26-int LTR ERVK -64 6855 6310 5 809 22 0 0 0 chr15 29409950 29409972 -74085002 + AT_rich Low_complexity Low_complexity 1 22 0 5 809 239 79 26 0 chr15 29411113 29411151 -74083823 + (GA)n Simple_repeat Simple_repeat 1 39 0 5 809 423 123 0 0 chr15 29411227 29411308 -74083666 + (TG)n Simple_repeat Simple_repeat 1 81 0 5 809 232 298 0 17 chr15 29411319 29411377 -74083597 - B4A SINE B4 -230 62 6 5 809 281 346 125 36 chr15 29412406 29412574 -74082400 - MLT1B LTR MaLR -4 386 204 5 809 29 47 0 0 chr15 29413872 29413915 -74081059 + AT_rich Low_complexity Low_complexity 1 43 0 5 809 393 22 0 0 chr15 29413958 29414004 -74080970 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 809 180 200 0 0 chr15 29414245 29414295 -74080679 + A-rich Low_complexity Low_complexity 1 50 0 5 809 405 0 0 0 chr15 29414505 29414550 -74080424 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 809 318 363 49 85 chr15 29415136 29415650 -74079324 + MLT2B1 LTR ERVL 16 503 -53 5 809 706 119 52 16 chr15 29415674 29415985 -74078989 + (TCTA)n Simple_repeat Simple_repeat 1 322 0 5 809 231 360 79 0 chr15 29416210 29416324 -74078650 + RLTR13B1 LTR ERVK 210 332 -561 5 809 180 0 0 0 chr15 29416550 29416570 -74078404 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 809 576 324 22 11 chr15 29416599 29416777 -74078197 + B3 SINE B2 20 199 -17 5 809 21 0 0 0 chr15 29416830 29416851 -74078123 + AT_rich Low_complexity Low_complexity 1 21 0 5 809 223 255 28 19 chr15 29416940 29416995 -74077979 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 5 809 1405 107 51 0 chr15 29416995 29417210 -74077764 + Lx3_Mus LINE L1 6784 7009 0 5 809 223 255 28 19 chr15 29417210 29417262 -74077712 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 5 809 281 275 95 54 chr15 29417412 29417654 -74077320 - L1M5 LINE L1 -2585 3561 3310 5 809 1570 47 0 0 chr15 29420034 29420226 -74074748 - B2_Mm1a SINE B2 0 193 2 5 809 3323 239 139 38 chr15 29420327 29421434 -74073540 + Lx7 LINE L1 6462 7680 -16 5 809 198 0 0 0 chr15 29422279 29422301 -74072673 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 809 267 79 0 0 chr15 29422303 29422341 -74072633 + (CCA)n Simple_repeat Simple_repeat 1 38 0 5 809 185 268 109 73 chr15 29423443 29423580 -74071394 - MIRm SINE MIR -46 230 89 5 809 279 371 38 0 chr15 29424173 29424278 -74070696 - B1F SINE Alu -8 141 33 5 809 22 103 0 0 chr15 29425188 29425266 -74069708 + AT_rich Low_complexity Low_complexity 1 78 0 5 809 243 190 50 0 chr15 29425788 29425888 -74069086 - Lx5 LINE L1 -4 7046 6942 5 809 307 211 18 0 chr15 29425892 29425949 -74069025 + Lx5 LINE L1 6855 6912 -138 5 809 398 94 16 0 chr15 29426519 29426583 -74068391 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 809 212 175 0 34 chr15 29426641 29426700 -74068274 + C-rich Low_complexity Low_complexity 8 64 0 5 809 2287 72 0 27 chr15 29426899 29427228 -74067746 - L1_Mus1 LINE L1 0 6567 6248 6 809 532 320 59 46 chr15 29427298 29427517 -74067457 - B4A SINE B4 -70 222 1 6 809 192 152 0 0 chr15 29429091 29429124 -74065850 + (TATG)n Simple_repeat Simple_repeat 4 36 0 6 809 27 29 0 0 chr15 29429201 29429235 -74065739 + AT_rich Low_complexity Low_complexity 1 34 0 6 809 1086 31 0 0 chr15 29429441 29429571 -74065403 + (TATATG)n Simple_repeat Simple_repeat 3 132 0 6 809 438 318 101 20 chr15 29429903 29430250 -74064724 - L1MA6 LINE L1 -82 6218 5844 6 809 312 143 0 0 chr15 29430486 29430542 -74064432 + (TA)n Simple_repeat Simple_repeat 2 57 0 6 809 541 99 49 0 chr15 29430554 29430635 -74064339 - ORR1A3 LTR MaLR -8 318 234 6 809 2858 145 99 30 chr15 29430635 29431192 -74063782 - RLTR1D LTR ERV1 0 605 1 6 809 454 144 303 23 chr15 29431192 29431328 -74063646 - ORR1A2 LTR MaLR -89 238 63 6 809 1687 185 148 122 chr15 29431522 29432283 -74062691 - RMER6C LTR ERVK 0 756 1 6 809 24 32 0 0 chr15 29432675 29432706 -74062268 + AT_rich Low_complexity Low_complexity 1 31 0 6 809 1663 218 112 65 chr15 29433679 29434089 -74060885 - RMER6C LTR ERVK 0 690 270 6 809 188 35 35 0 chr15 29434089 29434118 -74060856 + (AACTG)n Simple_repeat Simple_repeat 5 34 0 6 809 1663 218 112 65 chr15 29434118 29434366 -74060608 - RMER6C LTR ERVK -421 269 1 6 809 407 161 0 61 chr15 29435736 29435835 -74059139 + Lx9 LINE L1 7495 7587 -57 6 809 1135 232 0 18 chr15 29435837 29436065 -74058909 + URR1B DNA MER1_type 2 225 0 6 809 237 242 0 0 chr15 29436066 29436128 -74058846 + Lx9 LINE L1 7582 7643 -1 6 809 538 281 58 22 chr15 29436135 29436361 -74058613 + L1M4 LINE L1 4497 4730 -1416 6 809 1309 74 10 50 chr15 29436402 29436601 -74058373 - BGLII LTR ERVK -228 193 3 6 809 666 0 0 0 chr15 29436601 29436675 -74058299 + (TC)n Simple_repeat Simple_repeat 2 75 0 6 809 1050 314 65 30 chr15 29436677 29437045 -74057929 + Lx9 LINE L1 6349 6729 -915 6 809 605 295 214 21 chr15 29437051 29437522 -74057452 + Lx9 LINE L1 6949 7510 -134 6 809 363 226 28 76 chr15 29437632 29437776 -74057198 + L1M4 LINE L1 5186 5322 -824 6 809 837 96 41 30 chr15 29439110 29439376 -74055598 + (TCTA)n Simple_repeat Simple_repeat 1 268 0 6 809 31 26 0 0 chr15 29439765 29439803 -74055171 + AT_rich Low_complexity Low_complexity 1 38 0 6 809 1079 95 7 0 chr15 29440028 29440175 -74054799 + B1_Mus1 SINE Alu 1 148 0 6 809 388 0 39 0 chr15 29440175 29440227 -74054747 + (CAAAAA)n Simple_repeat Simple_repeat 6 59 0 6 809 342 0 0 0 chr15 29440314 29440352 -74054622 + (TC)n Simple_repeat Simple_repeat 1 38 0 6 809 208 169 15 15 chr15 29440355 29440377 -74054597 + (TG)n Simple_repeat Simple_repeat 1 22 0 6 809 558 43 0 0 chr15 29440377 29440446 -74054528 + (TA)n Simple_repeat Simple_repeat 2 70 0 6 809 208 169 15 15 chr15 29440446 29440489 -74054485 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 809 2626 165 9 17 chr15 29440671 29441134 -74053840 - RLTR25B LTR ERVK -564 464 6 6 809 329 300 28 28 chr15 29441298 29441442 -74053532 + MTE-int LTR MaLR 1391 1534 -46 6 809 189 0 0 0 chr15 29442198 29442219 -74052755 + (TC)n Simple_repeat Simple_repeat 2 22 0 6 809 197 222 16 0 chr15 29442258 29442321 -74052653 + CT-rich Low_complexity Low_complexity 4 67 0 6 809 562 305 35 40 chr15 29442385 29442559 -74052415 - B3A SINE B2 -16 182 10 6 809 405 0 0 0 chr15 29442610 29442655 -74052319 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 809 197 139 33 44 chr15 29443652 29443742 -74051232 + (TCTCTG)n Simple_repeat Simple_repeat 2 90 0 6 809 218 232 0 28 chr15 29444246 29444317 -74050657 + GA-rich Low_complexity Low_complexity 1 69 0 6 809 25 31 0 0 chr15 29444845 29444877 -74050097 + AT_rich Low_complexity Low_complexity 1 32 0 6 809 258 32 0 0 chr15 29444904 29444935 -74050039 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 809 324 265 48 48 chr15 29446587 29446690 -74048284 + B3A SINE B2 3 105 -93 6 809 1038 67 6 3 chr15 29447499 29447663 -74047311 + L1_Mm LINE L1 1801 1961 -3922 6 809 1379 163 228 9 chr15 29447884 29448218 -74046756 - MTB_Mm LTR MaLR 0 407 1 6 809 450 0 0 0 chr15 29448257 29448307 -74046667 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 809 21 0 0 0 chr15 29448513 29448534 -74046440 + AT_rich Low_complexity Low_complexity 1 21 0 6 809 416 325 0 103 chr15 29448746 29448890 -74046084 + MTE2a LTR MaLR 1 127 -252 6 809 4296 132 4 20 chr15 29448890 29449595 -74045379 - Lx2 LINE L1 0 6997 6304 6 809 416 325 0 103 chr15 29449595 29449635 -74045339 + MTE2a LTR MaLR 128 166 -213 6 809 370 169 0 45 chr15 29449651 29449741 -74045233 - Lx3_Mus LINE L1 -62 6947 6850 6 809 655 270 22 22 chr15 29449946 29450128 -74044846 + MTE2a LTR MaLR 198 379 0 6 809 27 73 0 0 chr15 29450260 29450315 -74044659 + AT_rich Low_complexity Low_complexity 1 55 0 6 809 454 278 53 30 chr15 29450604 29450799 -74044175 + MER67D LTR ERV1 1 200 -511 6 809 285 29 0 0 chr15 29450811 29450845 -74044129 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 6 809 496 168 26 26 chr15 29450854 29450970 -74044004 - Lx3_Mus LINE L1 -19 6990 6875 6 809 302 358 16 40 chr15 29451571 29451696 -74043278 + B4A SINE B4 112 233 -59 6 809 536 29 14 0 chr15 29451745 29451815 -74043159 + (CA)n Simple_repeat Simple_repeat 1 71 0 6 809 23 0 0 0 chr15 29452624 29452647 -74042327 + AT_rich Low_complexity Low_complexity 1 23 0 6 809 198 103 0 0 chr15 29455015 29455044 -74039930 + (A)n Simple_repeat Simple_repeat 1 29 0 6 809 210 393 0 49 chr15 29455548 29455671 -74039303 + ID_B1 SINE B4 88 204 -20 6 809 443 63 0 16 chr15 29455816 29455880 -74039094 + (CATA)n Simple_repeat Simple_repeat 4 66 0 6 809 440 72 36 0 chr15 29456215 29456326 -74038648 + (TAGA)n Simple_repeat Simple_repeat 1 114 0 6 809 2215 228 43 20 chr15 29456422 29456484 -74038490 - RLTR18B LTR ERVK -4 508 449 6 809 4430 110 47 15 chr15 29456484 29457212 -74037762 - RMER17A LTR ERVK 0 751 1 6 809 2215 228 43 20 chr15 29457212 29457642 -74037332 - RLTR18B LTR ERVK -64 448 5 6 809 232 290 97 22 chr15 29457799 29457933 -74037041 - L1MB1 LINE L1 -16 6318 6175 6 809 349 268 147 56 chr15 29458055 29458340 -74036634 - L1MB1 LINE L1 -226 6074 5764 6 809 30 0 0 0 chr15 29458962 29458992 -74035982 + AT_rich Low_complexity Low_complexity 1 30 0 6 809 615 367 66 29 chr15 29459861 29460349 -74034625 + MER89 LTR ERV1 20 525 -34 6 809 481 332 19 19 chr15 29461056 29461262 -74033712 + B3 SINE B2 5 210 -6 6 809 597 386 21 50 chr15 29461439 29461679 -74033295 - MTEa LTR MaLR -122 257 25 6 809 1338 229 16 19 chr15 29462068 29462380 -74032594 - Lx2B LINE L1 -4 6996 6686 6 809 40994 4 1 0 chr15 29463045 29469235 -74025739 - L1Md_A LINE L1 0 6582 422 6 809 29 70 0 0 chr15 29469257 29469314 -74025660 + AT_rich Low_complexity Low_complexity 1 57 0 6 809 724 240 212 11 chr15 29470690 29470968 -74024006 + Lx4B LINE L1 6725 7058 0 6 809 378 0 0 0 chr15 29471164 29471206 -74023768 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 6 809 418 286 42 21 chr15 29471206 29471349 -74023625 - Lx4B LINE L1 -21 7037 6892 6 809 1402 181 65 0 chr15 29471345 29471593 -74023381 - Lx4B LINE L1 -423 6635 6372 6 809 4082 146 19 22 chr15 29471592 29472237 -74022737 + Lx4B LINE L1 5540 6188 -870 6 809 4036 62 4 2 chr15 29472237 29472753 -74022221 - L1_Mus2 LINE L1 0 6566 6050 6 809 4082 162 38 27 chr15 29472753 29472922 -74022052 + Lx4B LINE L1 6189 6368 -690 6 809 222 169 35 35 chr15 29473807 29473948 -74021026 + (TCTA)n Simple_repeat Simple_repeat 1 141 0 6 809 37766 32 0 0 chr15 29474710 29480921 -74014053 - L1Md_T LINE L1 0 6585 278 6 809 386 331 84 39 chr15 29481391 29481570 -74013404 + B4A SINE B4 2 188 -104 6 809 246 388 10 0 chr15 29482812 29482915 -74012059 + MLT1H1 LTR MaLR 65 168 -387 6 809 380 350 89 17 chr15 29483140 29483320 -74011654 + LTR16A LTR ERVL 159 351 -100 6 101 27195 132 35 10 chr15 29487123 29493172 -74001802 + L1_Mus3 LINE L1 432 6638 0 6 810 21 0 0 0 chr15 29493229 29493250 -74001724 + AT_rich Low_complexity Low_complexity 1 21 0 6 810 22 56 0 0 chr15 29493294 29493330 -74001644 + AT_rich Low_complexity Low_complexity 1 36 0 6 810 23 86 0 0 chr15 29493676 29493734 -74001240 + AT_rich Low_complexity Low_complexity 1 58 0 6 810 261 323 102 36 chr15 29494088 29494451 -74000523 - L1MA5A LINE L1 -347 5950 5564 6 810 530 266 86 33 chr15 29494511 29494781 -74000193 - L1M2 LINE L1 -529 5650 5345 6 810 2207 266 38 35 chr15 29494822 29495485 -73999489 - Lx9 LINE L1 -506 7138 6474 6 810 789 179 0 27 chr15 29495534 29495683 -73999291 - B1_Mur4 SINE Alu -1 149 5 6 810 3427 83 2 15 chr15 29496344 29496859 -73998115 - L1_Mus4 LINE L1 0 6636 6154 6 810 325 291 51 112 chr15 29496860 29497148 -73997826 + ORR1E LTR MaLR 103 379 0 6 810 808 156 45 0 chr15 29497502 29497656 -73997318 + Lx LINE L1 6486 6646 -8 6 810 1941 133 56 0 chr15 29498501 29498825 -73996149 - Lx3A LINE L1 -11 6970 6629 6 810 432 55 0 0 chr15 29498826 29498881 -73996093 + (TTA)n Simple_repeat Simple_repeat 3 57 0 6 810 492 273 28 7 chr15 29498881 29499025 -73995949 - Lx6 LINE L1 -34 7426 7280 6 810 511 212 8 15 chr15 29500159 29500293 -73994681 - Lx6 LINE L1 0 7460 7328 1 810 1093 270 85 19 chr15 29500500 29501040 -73993934 - Lx9 LINE L1 -771 6873 6298 2 810 1527 177 88 0 chr15 29501492 29501797 -73993177 + IAPEY3_LTR LTR ERVK 1 332 0 3 810 334 275 0 0 chr15 29502183 29502274 -73992700 + (TAG)n Simple_repeat Simple_repeat 2 92 0 4 810 345 333 8 0 chr15 29503047 29503170 -73991804 + MER110 LTR ERV1 343 466 -25 5 810 252 337 30 0 chr15 29503414 29503515 -73991459 - RMER15 LTR ERVL -65 510 407 6 810 428 377 20 10 chr15 29504289 29504490 -73990484 + MLT1A0 LTR MaLR 115 317 -48 7 810 235 248 11 17 chr15 29504582 29504666 -73990308 - MIRm SINE MIR -75 193 111 8 810 33677 83 15 2 chr15 29504913 29510833 -73984141 - L1Md_F2 LINE L1 0 6582 585 9 810 351 0 0 0 chr15 29513095 29513134 -73981840 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 810 576 0 0 0 chr15 29513966 29514030 -73980944 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 810 200 170 0 36 chr15 29514299 29514354 -73980620 + (TTAAA)n Simple_repeat Simple_repeat 1 53 0 1 810 22 35 0 0 chr15 29514429 29514458 -73980516 + AT_rich Low_complexity Low_complexity 1 29 0 1 810 222 171 0 0 chr15 29514660 29514701 -73980273 + (CAT)n Simple_repeat Simple_repeat 2 42 0 1 810 303 355 92 16 chr15 29515370 29515619 -73979355 - L1MC LINE L1 -1873 4273 4006 1 810 381 236 16 46 chr15 29515620 29515749 -73979225 - RMER13B LTR ERVK 0 908 729 1 810 2678 148 35 11 chr15 29515719 29516178 -73978796 - RMER13B LTR ERVK -438 470 1 1 810 479 317 84 18 chr15 29516397 29516670 -73978304 - B4A SINE B4 -1 291 1 1 810 22 0 0 0 chr15 29517046 29517068 -73977906 + AT_rich Low_complexity Low_complexity 1 22 0 1 810 30 0 0 0 chr15 29517136 29517166 -73977808 + AT_rich Low_complexity Low_complexity 1 30 0 1 810 1628 138 3 21 chr15 29518029 29518311 -73976663 + Lx LINE L1 6376 6652 -2 2 810 262 349 0 34 chr15 29520341 29520430 -73974544 + B4 SINE B4 205 290 -2 2 810 263 280 0 39 chr15 29520851 29520929 -73974045 + Lx9 LINE L1 7048 7122 -522 2 810 410 328 10 34 chr15 29520927 29521132 -73973842 + Lx8 LINE L1 6915 7114 -359 2 810 228 35 0 0 chr15 29521302 29521331 -73973643 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 810 40944 6 0 0 chr15 29521573 29527927 -73967047 - L1Md_A LINE L1 0 6582 228 2 810 747 255 28 24 chr15 29528070 29528283 -73966691 + B3 SINE B2 2 215 -1 2 810 3759 205 88 1 chr15 29528848 29529625 -73965349 - Lx5 LINE L1 -4 7046 6203 2 810 628 213 52 47 chr15 29529705 29529877 -73965097 - Lx6 LINE L1 0 7460 7288 2 810 256 338 109 40 chr15 29530018 29530495 -73964479 - L1MD LINE L1 -1832 4314 3805 2 810 238 200 0 28 chr15 29530644 29530716 -73964258 + Lx9 LINE L1 7574 7643 -1 3 810 22 35 0 0 chr15 29531461 29531490 -73963484 + AT_rich Low_complexity Low_complexity 1 29 0 3 810 579 230 36 22 chr15 29531685 29531823 -73963151 - Lx9 LINE L1 -1010 6634 6495 3 810 414 0 0 0 chr15 29531829 29531875 -73963099 + (TTA)n Simple_repeat Simple_repeat 2 47 0 3 810 966 325 23 34 chr15 29531892 29532367 -73962607 + Lx9 LINE L1 6972 7441 -203 3 810 431 311 150 60 chr15 29533269 29533536 -73961438 + MLT2D LTR ERVL 10 300 -114 3 810 1076 276 126 10 chr15 29533538 29534049 -73960925 + Lx5 LINE L1 5944 6729 -731 3 810 250 115 39 0 chr15 29534059 29534111 -73960863 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 3 810 662 278 50 14 chr15 29534124 29534334 -73960640 + Lx5 LINE L1 6455 6643 -407 3 810 293 348 161 38 chr15 29534865 29535206 -73959768 + MLT1E3 LTR MaLR 42 424 -200 3 810 1371 63 0 0 chr15 29535349 29535554 -73959420 + (GAGAA)n Simple_repeat Simple_repeat 1 205 0 3 810 209 237 0 17 chr15 29536124 29536184 -73958790 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 4 810 467 276 13 38 chr15 29536652 29536810 -73958164 + RCHARR1 DNA MER1_type 660 813 -161 4 810 384 244 31 54 chr15 29536815 29536945 -73958029 + RSINE1 SINE B4 6 132 -33 4 810 28 0 0 0 chr15 29539423 29539451 -73955523 + AT_rich Low_complexity Low_complexity 1 28 0 4 810 283 204 19 0 chr15 29539640 29539694 -73955280 + GA-rich Low_complexity Low_complexity 1 55 0 4 810 647 187 24 0 chr15 29539696 29539862 -73955112 + G-rich Low_complexity Low_complexity 2 171 0 4 810 1772 250 65 0 chr15 29539866 29540282 -73954692 + Lx6 LINE L1 6882 7324 -136 4 810 5158 110 24 0 chr15 29540294 29541048 -73953926 - Lx3_Mus LINE L1 0 7009 6238 4 810 978 298 94 22 chr15 29541093 29541495 -73953479 + Lx8 LINE L1 7020 7450 -23 4 810 195 42 0 0 chr15 29541553 29541577 -73953397 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 4 810 262 314 0 40 chr15 29542526 29542652 -73952322 + L1MEg LINE L1 483 603 -5481 5 810 608 135 0 9 chr15 29543476 29543588 -73951386 + (CA)n Simple_repeat Simple_repeat 2 112 0 5 810 2802 87 23 15 chr15 29543608 29544004 -73950970 - MTB LTR MaLR 0 400 2 5 810 278 319 62 14 chr15 29544004 29544150 -73950824 + MLT1A1 LTR MaLR 244 396 -12 5 810 22 0 0 0 chr15 29544407 29544429 -73950545 + AT_rich Low_complexity Low_complexity 1 22 0 5 810 754 156 8 0 chr15 29545294 29545416 -73949558 + B2_Mm2 SINE B2 1 123 -72 5 810 1171 288 56 18 chr15 29546189 29546687 -73948287 + L1_Mur3 LINE L1 3616 4132 -1748 5 810 577 264 12 0 chr15 29546701 29546868 -73948106 + L1_Mur3 LINE L1 4375 4543 -1337 5 810 1189 348 19 13 chr15 29546926 29547447 -73947527 + Lx8 LINE L1 6741 7264 -209 5 810 229 118 0 0 chr15 29547445 29547479 -73947495 - Lx3A LINE L1 -955 6026 5993 5 810 869 349 36 46 chr15 29548103 29548578 -73946396 - MTE-int LTR MaLR -1014 566 97 5 810 484 259 30 54 chr15 29548630 29548836 -73946138 - MTEa LTR MaLR -1 378 173 6 810 2125 134 21 6 chr15 29549560 29549890 -73945084 - Lx3_Mus LINE L1 -8 7001 6667 6 810 1053 99 30 18 chr15 29549891 29550031 -73944943 + B2_Mm1a SINE B2 16 156 -37 6 810 258 32 0 0 chr15 29550031 29550062 -73944912 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 6 810 1053 99 30 18 chr15 29550062 29550086 -73944888 + B2_Mm1a SINE B2 157 182 -11 6 810 7974 155 45 1 chr15 29550086 29551407 -73943567 - Lx4A LINE L1 -10 7048 5671 6 810 1133 74 0 39 chr15 29551407 29551561 -73943413 + B1_Mus1 SINE Alu 1 148 0 6 810 1196 102 6 22 chr15 29551583 29551764 -73943210 + B2_Mm1t SINE B2 2 179 -14 6 810 293 110 360 20 chr15 29551778 29551878 -73943096 + B2_Mm2 SINE B2 48 181 -14 6 810 9890 53 2 0 chr15 29551884 29553809 -73941165 - L1Md_F2 LINE L1 -19 6563 4636 6 810 8007 63 1 1 chr15 29553809 29554865 -73940109 + L1_Mm LINE L1 2936 3991 -1892 6 810 493 289 101 14 chr15 29554949 29555281 -73939693 + L1M2 LINE L1 3427 3778 -2365 7 810 6559 113 10 5 chr15 29555288 29556285 -73938689 - L1_Mur2 LINE L1 -200 5677 4676 7 810 264 312 49 21 chr15 29556354 29556498 -73938476 + Lx8 LINE L1 7178 7325 -148 7 810 382 313 93 50 chr15 29556697 29556956 -73938018 - L1M2 LINE L1 -3196 2947 2678 7 810 705 43 0 0 chr15 29557454 29557547 -73937427 + (TG)n Simple_repeat Simple_repeat 2 94 0 7 810 189 0 0 0 chr15 29557547 29557568 -73937406 + (TTG)n Simple_repeat Simple_repeat 3 23 0 7 810 207 0 0 0 chr15 29557568 29557591 -73937383 + (ATG)n Simple_repeat Simple_repeat 1 23 0 7 810 3316 240 64 68 chr15 29557738 29558803 -73936171 + Lx7 LINE L1 6587 7647 -49 7 810 1086 101 0 0 chr15 29558815 29558973 -73936001 + (GGAA)n Simple_repeat Simple_repeat 4 161 0 7 810 298 250 55 9 chr15 29558976 29559085 -73935889 + Lx7 LINE L1 7578 7691 -5 7 810 659 341 23 54 chr15 29559562 29559915 -73935059 + Lx8 LINE L1 6966 7307 -166 8 810 504 0 0 0 chr15 29560218 29560274 -73934700 + (TC)n Simple_repeat Simple_repeat 1 56 0 8 810 599 257 29 0 chr15 29561015 29561151 -73933823 - B1_Mus2 SINE Alu -2 145 6 8 810 277 292 22 104 chr15 29561037 29561171 -73933803 - MT2B LTR ERVL -323 278 156 8 810 25 0 0 0 chr15 29562290 29562315 -73932659 + AT_rich Low_complexity Low_complexity 1 25 0 8 810 795 217 66 0 chr15 29562536 29562702 -73932272 + Lx5 LINE L1 6212 6388 -662 8 810 3826 163 51 12 chr15 29562710 29563432 -73931542 + RMER12 LTR ERVK 8 757 -565 8 810 819 115 0 0 chr15 29563434 29563582 -73931392 + (TCCA)n Simple_repeat Simple_repeat 3 150 0 8 810 192 40 0 0 chr15 29563594 29563619 -73931355 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 8 810 2333 240 91 10 chr15 29563812 29564406 -73930568 + Lx5 LINE L1 6391 7032 -18 8 810 282 56 0 0 chr15 29564413 29564449 -73930525 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 8 810 450 0 0 0 chr15 29565304 29565354 -73929620 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 810 1835 275 66 28 chr15 29567743 29568453 -73926521 + Lx9 LINE L1 6907 7643 -1 9 810 250 266 239 15 chr15 29568721 29568851 -73926123 + RMER15 LTR ERVL 352 510 -65 9 810 255 253 77 38 chr15 29568871 29569048 -73925926 + L1M2 LINE L1 3450 3636 -2510 9 810 470 335 96 34 chr15 29569175 29569644 -73925330 + L1M2 LINE L1 4247 4744 -1399 9 810 255 303 50 10 chr15 29569782 29569882 -73925092 + PB1D10 SINE Alu 10 113 -4 9 810 21 0 0 0 chr15 29570031 29570052 -73924922 + AT_rich Low_complexity Low_complexity 1 21 0 9 810 597 207 0 0 chr15 29570821 29571099 -73923875 + (TG)n Simple_repeat Simple_repeat 1 278 0 9 810 300 235 0 0 chr15 29571117 29571279 -73923695 + (TG)n Simple_repeat Simple_repeat 1 162 0 9 810 231 261 135 0 chr15 29572105 29572177 -73922797 + RMER17A LTR ERVK 356 440 -311 9 810 441 0 0 0 chr15 29572177 29572226 -73922748 + (TG)n Simple_repeat Simple_repeat 2 50 0 9 810 231 261 135 0 chr15 29572226 29572264 -73922710 + RMER17A LTR ERVK 441 480 -271 9 810 22 35 0 0 chr15 29572444 29572473 -73922501 + AT_rich Low_complexity Low_complexity 1 29 0 9 810 1032 261 16 74 chr15 29572481 29572858 -73922116 - Lx2B LINE L1 -72 6928 6574 1 810 1432 226 92 5 chr15 29573183 29573553 -73921421 + Lx2B LINE L1 6599 7000 0 1 810 399 41 0 0 chr15 29573669 29573718 -73921256 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 810 320 0 25 0 chr15 29574155 29574195 -73920779 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 810 692 100 8 0 chr15 29574195 29574314 -73920660 + (TA)n Simple_repeat Simple_repeat 2 122 0 1 810 541 345 7 0 chr15 29574350 29574489 -73920485 - RSINE1 SINE B4 -19 146 7 1 810 3650 55 0 0 chr15 29574585 29575037 -73919937 - L1_Mus1 LINE L1 -1 6566 6115 1 810 249 57 0 0 chr15 29575213 29575248 -73919726 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 810 396 358 54 24 chr15 29575250 29575585 -73919389 - Lx8 LINE L1 -246 7227 6883 1 810 2166 120 3 0 chr15 29575589 29575906 -73919068 + ORR1A2 LTR MaLR 2 319 -8 1 810 4665 189 46 14 chr15 29575910 29576953 -73918021 + ORR1A2-int LTR MaLR 1 1076 -716 1 810 2993 141 12 18 chr15 29576964 29577456 -73917518 + ORR1A2-int LTR MaLR 1475 1963 0 1 810 1937 142 29 13 chr15 29577456 29577770 -73917204 + ORR1A2 LTR MaLR 1 319 -8 1 810 879 98 15 22 chr15 29577802 29577938 -73917036 + B1_Mm SINE Alu 2 136 -11 1 810 34894 36 0 0 chr15 29577938 29583102 -73911872 + L1Md_Gf LINE L1 284 5544 -342 1 810 212 186 90 103 chr15 29583102 29583147 -73911827 + B1_Mus2 SINE Alu 71 117 -30 1 810 8954 7 0 0 chr15 29583147 29584143 -73910831 + L1Md_T LINE L1 5587 6582 0 1 810 212 186 90 103 chr15 29584143 29584175 -73910799 + B1_Mus2 SINE Alu 118 147 0 1 810 184 106 41 41 chr15 29584175 29584224 -73910750 + A-rich Low_complexity Low_complexity 2 50 0 1 810 1280 67 0 11 chr15 29584235 29584416 -73910558 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 1 810 497 296 41 26 chr15 29584439 29584633 -73910341 - Lx8 LINE L1 -629 6844 6648 1 810 288 169 17 17 chr15 29584793 29584853 -73910121 - Lx8 LINE L1 -834 6639 6580 1 810 401 388 6 0 chr15 29584882 29585060 -73909914 - Lx8 LINE L1 -1088 6385 6207 1 810 819 302 30 19 chr15 29586866 29587129 -73907845 + MMAR1 DNA Mariner 948 1213 -73 1 810 440 303 74 42 chr15 29587231 29587448 -73907526 + B4A SINE B4 42 265 -27 1 810 327 317 0 31 chr15 29587465 29587592 -73907382 + (CATATA)n Simple_repeat Simple_repeat 4 126 0 1 810 180 200 0 0 chr15 29587639 29587684 -73907290 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 810 2224 62 69 0 chr15 29588509 29588814 -73906160 + ORR1A1 LTR MaLR 21 346 0 1 810 366 309 134 38 chr15 29588900 29589273 -73905701 - L1MB8 LINE L1 -43 6135 5727 1 810 270 0 0 0 chr15 29589694 29589724 -73905250 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 810 534 319 6 51 chr15 29589732 29589907 -73905067 - B3A SINE B2 -29 169 3 1 810 1848 225 87 7 chr15 29590046 29590484 -73904490 + Lx4B LINE L1 6580 7052 -6 1 810 968 127 45 0 chr15 29590504 29590661 -73904313 + L1_Mur2 LINE L1 1786 1949 -3931 1 810 5352 164 36 19 chr15 29590673 29591806 -73903168 + L1_Mur2 LINE L1 3021 4173 -1704 1 810 324 296 40 10 chr15 29591806 29591905 -73903069 - RSINE1 SINE B4 -22 143 42 1 810 244 250 9 28 chr15 29592432 29592539 -73902435 - L1MCa LINE L1 -2866 3455 3351 1 810 25 31 0 0 chr15 29592545 29592577 -73902397 + AT_rich Low_complexity Low_complexity 1 32 0 1 810 416 183 0 11 chr15 29592838 29592932 -73902042 + (TA)n Simple_repeat Simple_repeat 2 94 0 1 810 303 261 99 21 chr15 29592937 29593078 -73901896 - L1MCa LINE L1 -4545 1963 1812 1 810 499 330 71 37 chr15 29593134 29593402 -73901572 + MLT1A0 LTR MaLR 87 363 -2 1 810 336 24 0 0 chr15 29593508 29593549 -73901425 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 810 486 0 0 0 chr15 29593549 29593602 -73901372 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 810 309 315 71 84 chr15 29593608 29593847 -73901127 - MER31A LTR ERV1 -11 455 220 1 810 201 74 0 0 chr15 29594853 29594880 -73900094 + (T)n Simple_repeat Simple_repeat 1 27 0 1 810 3277 57 2 2 chr15 29594894 29595301 -73899673 - MTB_Mm LTR MaLR 0 407 1 1 810 297 68 0 0 chr15 29595474 29595518 -73899456 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 810 235 206 0 52 chr15 29596534 29596611 -73898363 + Lx9 LINE L1 7572 7644 0 1 810 28 0 0 0 chr15 29596874 29596902 -73898072 + AT_rich Low_complexity Low_complexity 1 28 0 1 810 348 100 129 0 chr15 29596903 29596973 -73898001 - Lx5 LINE L1 -6 7044 6966 1 810 26 50 0 0 chr15 29597375 29597415 -73897559 + AT_rich Low_complexity Low_complexity 1 40 0 1 810 3732 71 2 6 chr15 29597447 29597944 -73897030 + L1Md_F2 LINE L1 6085 6579 -3 1 810 1923 135 26 86 chr15 29598020 29598441 -73896533 - Lx3B LINE L1 -1 6972 6577 1 810 252 247 81 12 chr15 29598502 29598588 -73896386 + L1MC4a LINE L1 6617 6708 -1174 1 810 477 0 0 0 chr15 29598799 29598852 -73896122 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 810 521 291 140 59 chr15 29599665 29600086 -73894888 - Lx9 LINE L1 -176 7468 7014 1 810 535 301 17 39 chr15 29600077 29600257 -73894717 + Lx8 LINE L1 6592 6767 -706 1 810 313 235 12 0 chr15 29600285 29600370 -73894604 - Lx5 LINE L1 0 7050 6965 1 810 2465 108 3 3 chr15 29600386 29600758 -73894216 + L1_Mus4 LINE L1 6264 6635 -1 1 810 377 248 70 17 chr15 29600789 29600904 -73894070 + Lx9 LINE L1 6945 7050 -594 1 810 313 287 87 0 chr15 29602253 29602368 -73892606 + ORR1E LTR MaLR 1 125 -234 1 810 538 101 9 9 chr15 29602369 29602479 -73892495 + (TCTA)n Simple_repeat Simple_repeat 4 113 0 1 810 385 198 21 0 chr15 29602500 29602596 -73892378 + (TATATG)n Simple_repeat Simple_repeat 4 101 0 1 810 240 218 73 0 chr15 29603091 29603146 -73891828 - B1_Mur2 SINE Alu -5 144 86 1 810 22 0 0 0 chr15 29603156 29603178 -73891796 + AT_rich Low_complexity Low_complexity 1 22 0 1 810 245 267 18 98 chr15 29603339 29603451 -73891523 - LTR37B LTR ERV1 -199 269 167 1 810 516 299 0 14 chr15 29603644 29603790 -73891184 + RSINE1 SINE B4 3 146 -19 1 810 352 256 36 36 chr15 29604066 29604204 -73890770 - L1MA9 LINE L1 -12 6300 6163 1 810 252 59 0 0 chr15 29604748 29604782 -73890192 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 810 263 233 58 11 chr15 29605072 29605159 -73889815 - L1MD3 LINE L1 -1991 6004 5914 1 810 8232 36 3 0 chr15 29605428 29606679 -73888295 - L1Md_F2 LINE L1 -12 6570 5317 1 810 4173 102 27 16 chr15 29606935 29607037 -73887937 + Lx3A LINE L1 5255 5371 -515 1 810 1051 94 0 0 chr15 29607037 29607175 -73887799 + B1_Mm SINE Alu 1 138 -9 1 810 222 37 0 0 chr15 29607175 29607202 -73887772 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 810 317 24 24 0 chr15 29607202 29607243 -73887731 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 1 810 9482 102 14 20 chr15 29607243 29608224 -73886750 + Lx3A LINE L1 5372 6324 -657 1 810 2393 122 22 55 chr15 29608224 29608640 -73886334 - RLTR9D LTR ERVK -1 402 1 1 810 9482 102 10 21 chr15 29608640 29609290 -73885684 + Lx3A LINE L1 6325 6979 -2 1 810 651 134 50 0 chr15 29609407 29609526 -73885448 - L1Md_F LINE L1 -5513 1006 882 1 810 544 216 121 35 chr15 29610699 29610872 -73884102 + Lx3_Mus LINE L1 4933 5120 -727 1 810 335 309 44 26 chr15 29610879 29610992 -73883982 - B3A SINE B2 -83 115 1 1 810 21 104 0 0 chr15 29611338 29611415 -73883559 + AT_rich Low_complexity Low_complexity 1 77 0 1 810 3203 88 38 35 chr15 29611855 29612379 -73882595 + Lx3_Mus LINE L1 5641 6168 -841 1 810 4950 175 47 23 chr15 29612694 29613191 -73881783 + Lx2B LINE L1 5961 6474 -526 1 810 243 0 0 0 chr15 29613191 29613218 -73881756 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 810 4950 175 47 23 chr15 29613218 29613734 -73881240 + Lx2B LINE L1 6475 6999 -1 1 810 350 21 21 0 chr15 29613844 29613891 -73881083 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 810 385 110 27 0 chr15 29614220 29614293 -73880681 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 810 936 177 38 11 chr15 29614442 29614625 -73880349 - B2_Mm2 SINE B2 -7 188 1 1 810 2284 205 62 6 chr15 29614851 29615336 -73879638 - Lx4B LINE L1 -6 7052 6541 1 810 400 237 109 8 chr15 29615480 29615513 -73879461 + Lx7 LINE L1 6701 6733 -963 1 810 261 83 0 0 chr15 29615513 29615549 -73879425 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1 810 400 237 109 8 chr15 29615549 29615634 -73879340 + Lx7 LINE L1 6734 6830 -866 1 810 1600 196 196 10 chr15 29615700 29615899 -73879075 + L1_Mur3 LINE L1 1853 2092 -3788 1 810 234 62 0 0 chr15 29615899 29615931 -73879043 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 810 270 0 0 0 chr15 29615931 29615960 -73879014 + (GA)n Simple_repeat Simple_repeat 2 31 0 1 810 1600 196 196 10 chr15 29615960 29616243 -73878731 + L1_Mur3 LINE L1 2093 2425 -3455 1 810 1074 223 212 19 chr15 29616346 29616757 -73878217 - Lx7 LINE L1 -2 7694 7205 1 810 233 277 0 0 chr15 29617281 29617328 -73877646 - Lx7 LINE L1 -1090 6606 6560 1 810 691 191 47 130 chr15 29617330 29617559 -73877415 - ORR1C2 LTR MaLR -201 183 1 1 810 32 0 0 0 chr15 29617758 29617790 -73877184 + AT_rich Low_complexity Low_complexity 1 32 0 1 810 2136 200 103 27 chr15 29619031 29619134 -73875840 + RLTR12A LTR ERVK 1 97 -471 1 810 2760 55 9 0 chr15 29619134 29619477 -73875497 - ORR1A1 LTR MaLR 0 346 1 1 810 2136 200 103 27 chr15 29619477 29619887 -73875087 + RLTR12A LTR ERVK 98 553 -15 1 810 287 0 53 0 chr15 29620238 29620276 -73874698 + (TAAAAA)n Simple_repeat Simple_repeat 2 41 0 1 810 301 268 47 57 chr15 29620419 29620623 -73874351 - L1M3 LINE L1 -682 5609 5411 1 810 626 82 12 0 chr15 29620754 29620839 -73874135 + L1Md_F2 LINE L1 6184 6269 -315 1 810 659 58 0 55 chr15 29620845 29620954 -73874020 + L1Md_F2 LINE L1 6480 6582 0 1 810 231 330 27 43 chr15 29621006 29621190 -73873784 + L1MB1 LINE L1 5872 6052 -116 1 810 3024 49 8 3 chr15 29621554 29621943 -73873031 + MTA_Mm LTR MaLR 1 391 -5 1 810 622 304 43 39 chr15 29621946 29622201 -73872773 - Lx8 LINE L1 -228 7245 6979 1 810 233 139 0 0 chr15 29622207 29622243 -73872731 + Lx8 LINE L1 7426 7461 -12 1 811 371 327 10 0 chr15 29622410 29622511 -73872463 + PB1D10 SINE Alu 6 107 -10 1 811 534 31 0 0 chr15 29623283 29623347 -73871627 + (TG)n Simple_repeat Simple_repeat 2 65 0 1 811 1688 94 80 29 chr15 29623784 29624058 -73870916 + ORR1A2 LTR MaLR 1 288 -39 1 811 5030 17 2 0 chr15 29624058 29624639 -73870335 - L1Md_A LINE L1 -623 5260 4679 1 811 2831 21 0 0 chr15 29624637 29624962 -73870012 + L1Md_A LINE L1 5261 5585 -298 1 811 8387 32 1 0 chr15 29624963 29625958 -73869016 + L1Md_A LINE L1 5587 6582 0 1 811 334 106 0 0 chr15 29625961 29626008 -73868966 + ORR1A2 LTR MaLR 272 318 -8 1 811 267 345 75 83 chr15 29626015 29626260 -73868714 + B4 SINE B4 63 292 0 1 811 279 0 0 0 chr15 29626299 29626330 -73868644 + (TAA)n Simple_repeat Simple_repeat 3 33 0 1 811 226 229 29 0 chr15 29626345 29626415 -73868559 + Lx7 LINE L1 5804 5875 -1821 1 811 2062 270 72 25 chr15 29626412 29626967 -73868007 + Lx6 LINE L1 6795 7375 -85 2 811 342 319 62 10 chr15 29627103 29627312 -73867662 + L1MC LINE L1 2526 2745 -3401 2 811 9535 180 28 29 chr15 29628137 29630058 -73864916 + L1VL4 LINE L1 710 2616 -3270 2 811 459 0 0 0 chr15 29630058 29630109 -73864865 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 811 297 0 0 0 chr15 29630109 29630141 -73864833 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 811 9535 177 29 36 chr15 29630141 29630769 -73864205 + L1VL4 LINE L1 2617 3251 -2635 2 811 2177 193 110 26 chr15 29630738 29631266 -73863708 + Lx3C LINE L1 6403 6974 -2 2 811 1223 224 50 44 chr15 29631856 29632197 -73862777 - Lx6 LINE L1 -1515 5945 5603 2 811 1107 218 164 0 chr15 29632201 29632513 -73862461 - Lx6 LINE L1 -535 5345 4983 2 811 462 192 8 39 chr15 29633198 29633328 -73861646 - Lx7 LINE L1 -2 7694 7569 2 811 201 204 20 0 chr15 29633340 29633389 -73861585 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 2 811 1520 237 110 87 chr15 29633422 29634269 -73860705 + RMER6C LTR ERVK 1 720 0 2 811 1300 206 24 102 chr15 29634274 29634657 -73860317 - Lx7 LINE L1 -203 7493 7141 2 811 687 223 0 0 chr15 29634660 29634790 -73860184 - Lx7 LINE L1 -1327 6369 6240 2 811 404 228 88 0 chr15 29635125 29635239 -73859735 + RCHARR1 DNA MER1_type 836 959 -15 2 811 312 27 0 0 chr15 29635605 29635642 -73859332 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 2 811 2457 113 44 10 chr15 29635691 29636076 -73858898 + MTB LTR MaLR 3 400 0 2 811 1191 69 0 0 chr15 29636076 29636235 -73858739 + MTB-int LTR MaLR 1 159 -939 2 811 2519 153 40 16 chr15 29636537 29636987 -73857987 + RMER6B LTR ERVK 1 461 0 2 811 714 270 44 5 chr15 29637229 29637434 -73857540 - B3 SINE B2 0 216 4 2 811 504 0 0 0 chr15 29638507 29638563 -73856411 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 811 954 355 121 34 chr15 29638988 29639903 -73855071 - Lx8 LINE L1 -1 7472 6478 2 811 268 264 65 65 chr15 29639906 29639999 -73854975 + Lx8 LINE L1 6349 6441 -1032 2 811 542 381 48 18 chr15 29640220 29640493 -73854481 + B4A SINE B4 12 292 0 2 811 185 35 69 0 chr15 29640514 29640543 -73854431 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2 811 233 292 30 40 chr15 29640568 29640668 -73854306 + MLT1C LTR MaLR 148 246 -221 2 811 23 0 0 0 chr15 29641216 29641239 -73853735 + AT_rich Low_complexity Low_complexity 1 23 0 2 811 569 322 37 29 chr15 29641472 29641853 -73853121 + L1MA5 LINE L1 5657 6040 -260 2 811 231 189 0 0 chr15 29642273 29642326 -73852648 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 811 26 30 0 0 chr15 29642538 29642571 -73852403 + AT_rich Low_complexity Low_complexity 1 33 0 2 811 647 239 137 46 chr15 29642942 29643139 -73851835 + ORR1D1 LTR MaLR 1 215 -159 2 811 3401 237 49 64 chr15 29643146 29643535 -73851439 + RMER1A Other Other 83 438 -592 2 811 5569 127 29 2 chr15 29643535 29644406 -73850568 + Lx LINE L1 5761 6654 0 2 811 3401 237 49 64 chr15 29644406 29644862 -73850112 + RMER1A Other Other 439 888 -142 2 811 1062 86 0 0 chr15 29644862 29645013 -73849961 + (TG)n Simple_repeat Simple_repeat 2 152 0 2 811 3401 237 49 64 chr15 29645013 29645100 -73849874 + RMER1A Other Other 889 1001 -29 2 811 746 224 62 0 chr15 29645100 29645261 -73849713 + ORR1D1 LTR MaLR 190 360 -14 2 811 1268 180 4 32 chr15 29645795 29646047 -73848927 + L1_Mur2 LINE L1 5500 5744 -133 2 811 3643 176 52 19 chr15 29646034 29646788 -73848186 + Lx4B LINE L1 6068 6847 -153 2 811 25 51 0 0 chr15 29646804 29646843 -73848131 + AT_rich Low_complexity Low_complexity 1 39 0 2 811 858 76 0 0 chr15 29647561 29647693 -73847281 + (TG)n Simple_repeat Simple_repeat 1 132 0 2 811 478 297 65 12 chr15 29647910 29648168 -73846806 + L1MEf LINE L1 1583 1854 -4546 2 811 507 17 0 0 chr15 29648636 29648696 -73846278 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 811 785 328 87 62 chr15 29649178 29649698 -73845276 + MT2A LTR ERVL 1 533 0 2 811 586 358 94 87 chr15 29650051 29650489 -73844485 + LTR16A LTR ERVL 7 447 -4 2 811 1367 271 151 44 chr15 29650682 29650862 -73844112 - Lx8 LINE L1 -1 7472 7271 2 811 874 156 157 54 chr15 29650862 29651066 -73843908 - URR1A DNA MER1_type -1 225 1 2 811 1367 271 151 44 chr15 29651066 29651521 -73843453 - Lx8 LINE L1 -203 7270 6769 2 811 3467 132 11 13 chr15 29651512 29652041 -73842933 + Lx4A LINE L1 6356 6883 -175 2 811 498 346 0 0 chr15 29652127 29652286 -73842688 - Lx8 LINE L1 -1078 6395 6237 2 811 336 195 26 13 chr15 29652335 29652486 -73842488 + (TA)n Simple_repeat Simple_repeat 1 153 0 2 811 182 59 0 128 chr15 29652795 29652834 -73842140 + MIR SINE MIR 160 193 -69 2 811 1283 268 103 3 chr15 29652956 29653063 -73841911 + MTD LTR MaLR 12 120 -299 2 811 1020 31 0 0 chr15 29653063 29653191 -73841783 + (TG)n Simple_repeat Simple_repeat 1 128 0 2 811 1283 268 103 3 chr15 29653191 29653450 -73841524 + MTD LTR MaLR 121 414 -5 2 811 2339 94 22 0 chr15 29653971 29654291 -73840683 - ORR1A2 LTR MaLR 0 327 1 2 811 3962 43 4 63 chr15 29654958 29655501 -73839473 + L1Md_F2 LINE L1 6072 6582 0 2 811 503 248 37 0 chr15 29655904 29656013 -73838961 + RSINE1 SINE B4 2 114 -51 2 811 1128 239 133 49 chr15 29656524 29656893 -73838081 - MTD LTR MaLR -2 417 18 2 811 266 211 18 0 chr15 29657003 29657060 -73837914 + CT-rich Low_complexity Low_complexity 1 58 0 2 811 230 269 35 96 chr15 29657087 29657202 -73837772 + MLT1A0 LTR MaLR 249 356 -18 2 811 306 222 24 36 chr15 29657660 29657744 -73837230 - MTC-int LTR MaLR -1142 116 34 2 811 1693 224 53 28 chr15 29657779 29658174 -73836800 - MTD LTR MaLR -14 405 1 2 811 264 20 120 0 chr15 29659564 29659614 -73835360 + (TCTCTG)n Simple_repeat Simple_repeat 4 59 0 2 811 896 128 0 6 chr15 29659615 29659795 -73835179 + (TC)n Simple_repeat Simple_repeat 2 180 0 2 811 438 20 0 0 chr15 29659795 29659845 -73835129 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 811 399 327 103 25 chr15 29659914 29660118 -73834856 - Lx9 LINE L1 -277 7367 7148 2 811 375 276 75 7 chr15 29661112 29661258 -73833716 + RSINE1 SINE B4 3 158 -7 2 811 198 87 21 42 chr15 29661270 29661318 -73833656 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2 811 3325 114 130 0 chr15 29662205 29662722 -73832252 + MT2B2 LTR ERVL 1 584 0 2 811 575 330 92 25 chr15 29663389 29664296 -73830678 - L1MA9 LINE L1 -26 6286 5320 2 811 378 273 154 45 chr15 29664326 29664702 -73830272 - L1MA9 LINE L1 -897 5243 4827 2 811 268 320 87 27 chr15 29664697 29664880 -73830094 + Lx8 LINE L1 6095 6288 -1185 2 811 1281 330 97 18 chr15 29664907 29665517 -73829457 + Lx8 LINE L1 6337 6994 -479 2 811 355 253 49 78 chr15 29665519 29665589 -73829385 - RLTR21 LTR ERVK -239 1333 1264 2 811 216 0 0 0 chr15 29665589 29665613 -73829361 + (CATA)n Simple_repeat Simple_repeat 3 26 0 2 811 355 253 49 78 chr15 29665613 29665786 -73829188 - RLTR21 LTR ERVK -309 1263 1097 2 811 755 263 14 67 chr15 29666481 29666689 -73828285 + B3A SINE B2 2 198 0 2 811 30797 81 2 5 chr15 29666799 29672081 -73822893 + L1Md_F2 LINE L1 226 5589 -297 2 811 7780 51 18 0 chr15 29672081 29673057 -73821917 + L1Md_F2 LINE L1 5590 6583 -2 2 811 666 302 54 60 chr15 29673131 29673501 -73821473 - ORR1D2 LTR MaLR -2 368 1 2 811 431 18 18 0 chr15 29674159 29674215 -73820759 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 811 237 132 0 0 chr15 29674781 29674819 -73820155 + (A)n Simple_repeat Simple_repeat 1 38 0 2 811 229 300 16 91 chr15 29675413 29675534 -73819440 - L2a LINE L2 -80 3346 3235 2 811 243 318 84 15 chr15 29675723 29675854 -73819120 + MLT2B1 LTR ERVL 72 211 -309 2 811 210 308 15 0 chr15 29675858 29675923 -73819051 + (CA)n Simple_repeat Simple_repeat 1 66 0 2 811 606 28 0 0 chr15 29675976 29676048 -73818926 + (TG)n Simple_repeat Simple_repeat 2 73 0 2 811 412 344 41 41 chr15 29676381 29676578 -73818396 - ORR1E LTR MaLR -162 197 1 2 811 327 49 0 0 chr15 29676688 29676729 -73818245 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 811 22 0 0 0 chr15 29677274 29677296 -73817678 + AT_rich Low_complexity Low_complexity 1 22 0 2 811 467 128 12 0 chr15 29677953 29678039 -73816935 + (TA)n Simple_repeat Simple_repeat 1 87 0 2 811 867 68 0 0 chr15 29678194 29678311 -73816663 - L1_Mus2 LINE L1 -242 6324 6208 2 811 1862 81 31 4 chr15 29678311 29678571 -73816403 + L1_Mus2 LINE L1 6298 6564 -2 2 811 2430 205 102 3 chr15 29678804 29679373 -73815601 - Lx5 LINE L1 -550 6500 5876 2 811 1384 246 135 48 chr15 29679371 29679463 -73815511 + Lx5 LINE L1 6503 6589 -461 2 811 4954 103 12 23 chr15 29679463 29680198 -73814776 - Lx LINE L1 -6 6648 5922 2 811 1384 246 135 48 chr15 29680198 29680608 -73814366 + Lx5 LINE L1 6590 7049 -1 2 811 389 288 43 52 chr15 29680903 29681266 -73813708 - L1MA7 LINE L1 -282 6009 5644 2 811 1725 66 0 0 chr15 29681319 29681545 -73813429 - L1Md_F2 LINE L1 -7 6575 6350 2 811 1381 243 49 45 chr15 29681563 29681684 -73813290 + Lx7 LINE L1 7247 7363 -333 2 811 699 46 0 0 chr15 29681684 29681771 -73813203 + (TTCC)n Simple_repeat Simple_repeat 3 89 0 2 811 1381 243 49 45 chr15 29681771 29682097 -73812877 + Lx7 LINE L1 7364 7696 0 2 811 301 239 35 44 chr15 29682200 29682314 -73812660 - L1MA7 LINE L1 -855 5445 5333 2 811 639 120 0 0 chr15 29682409 29682526 -73812448 + (TG)n Simple_repeat Simple_repeat 1 117 0 2 811 265 125 0 0 chr15 29682526 29682566 -73812408 - Lx4B LINE L1 -454 6604 6565 2 811 400 152 32 233 chr15 29682569 29682758 -73812216 + Lx4B LINE L1 6900 7050 -8 2 811 1774 165 24 27 chr15 29683420 29683756 -73811218 - Lx3B LINE L1 -3 6970 6636 2 811 1433 309 121 31 chr15 29684678 29685538 -73809436 - Lx8 LINE L1 -184 7289 6353 2 811 26 30 0 0 chr15 29686363 29686396 -73808578 + AT_rich Low_complexity Low_complexity 1 33 0 2 811 11944 71 3 1 chr15 29687008 29688673 -73806301 + L1_Mm LINE L1 3917 5586 -297 2 811 7808 58 1 3 chr15 29688673 29689658 -73805316 + L1Md_F2 LINE L1 5587 6569 -13 2 811 677 98 9 0 chr15 29689889 29690001 -73804973 + (TA)n Simple_repeat Simple_repeat 2 114 0 2 811 558 0 0 0 chr15 29690957 29691019 -73803955 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 811 938 238 118 4 chr15 29691680 29691925 -73803049 + MT2A LTR ERVL 72 344 -189 2 811 594 75 0 0 chr15 29691958 29692038 -73802936 + (GAAA)n Simple_repeat Simple_repeat 2 81 0 2 811 1553 303 77 48 chr15 29692044 29692754 -73802220 + Lx8 LINE L1 5455 6219 -1254 2 811 413 317 63 15 chr15 29692754 29692959 -73802015 + B3 SINE B2 2 216 0 2 811 1553 308 114 70 chr15 29692959 29693282 -73801692 + Lx8 LINE L1 6220 6564 -909 2 811 1722 48 43 4 chr15 29693282 29693514 -73801460 + L1Md_F3 LINE L1 6344 6584 0 2 811 1553 308 114 70 chr15 29693514 29693565 -73801409 + Lx8 LINE L1 6565 6601 -872 2 811 1246 48 12 6 chr15 29693565 29693733 -73801241 + L1Md_F3 LINE L1 6416 6584 0 2 811 1553 308 114 70 chr15 29693733 29694224 -73800750 + Lx8 LINE L1 6602 7123 -350 2 811 774 73 0 0 chr15 29694494 29694604 -73800370 + (GA)n Simple_repeat Simple_repeat 1 110 0 2 811 235 337 90 0 chr15 29695223 29695312 -73799662 - MLT1E3 LTR MaLR -197 427 331 3 811 430 255 152 6 chr15 29695752 29695910 -73799064 + B3A SINE B2 3 183 -15 3 811 1169 61 129 0 chr15 29697314 29697477 -73797497 - B2_Mm2 SINE B2 -9 186 3 3 811 515 368 33 23 chr15 29697726 29697940 -73797034 - B3 SINE B2 0 216 1 3 811 5984 99 8 22 chr15 29697945 29698836 -73796138 + Lx3A LINE L1 6102 6979 -2 3 811 24 32 0 0 chr15 29698842 29698873 -73796101 + AT_rich Low_complexity Low_complexity 1 31 0 3 811 646 161 7 53 chr15 29699180 29699331 -73795643 - Lx2 LINE L1 0 6997 6854 3 811 292 246 115 36 chr15 29699582 29699721 -73795253 - MamGypLTR2b LTR Gypsy -39 883 734 3 811 840 288 42 33 chr15 29700842 29701176 -73793798 + Lx8 LINE L1 7002 7338 -135 3 811 530 274 128 22 chr15 29701788 29702076 -73792898 + MER67C LTR ERV1 8 331 -380 3 811 24 53 0 0 chr15 29702307 29702345 -73792629 + AT_rich Low_complexity Low_complexity 1 38 0 3 811 1341 63 0 11 chr15 29702633 29702810 -73792164 - L1_Mus1 LINE L1 0 6567 6393 3 811 257 308 11 21 chr15 29703505 29703598 -73791376 + MTEb LTR MaLR 55 146 -233 3 811 569 310 53 53 chr15 29705290 29705518 -73789456 - MTE-int LTR MaLR -307 1273 1046 3 811 2367 68 102 34 chr15 29705916 29706268 -73788706 + L1Md_F2 LINE L1 6197 6572 -10 3 811 1087 341 45 53 chr15 29706329 29706840 -73788134 - MTE-int LTR MaLR -593 987 481 3 811 656 305 93 21 chr15 29707370 29707661 -73787313 - MTE-int LTR MaLR -1126 454 143 3 811 393 110 0 0 chr15 29707673 29707746 -73787228 + (T)n Simple_repeat Simple_repeat 1 73 0 3 811 861 284 121 7 chr15 29707746 29708019 -73786955 - ORR1D2 LTR MaLR -66 304 1 3 811 330 324 9 0 chr15 29708022 29708130 -73786844 - MTE-int LTR MaLR -1377 203 95 3 811 895 277 60 24 chr15 29708132 29708380 -73786594 - MTE2b LTR MaLR -110 269 13 3 811 396 0 0 0 chr15 29709829 29709873 -73785101 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 811 290 127 0 71 chr15 29710039 29710124 -73784850 + T-rich Low_complexity Low_complexity 1 79 0 3 811 476 113 14 0 chr15 29710124 29710195 -73784779 - B1_Mus2 SINE Alu -75 72 1 3 811 909 92 158 12 chr15 29710231 29710396 -73784578 - L1Md_F2 LINE L1 0 6582 6394 3 811 246 340 150 20 chr15 29710698 29710845 -73784129 - B4A SINE B4 0 292 127 3 811 231 389 29 51 chr15 29710820 29710958 -73784016 - ID_B1 SINE B4 -77 147 13 3 811 2802 41 3 55 chr15 29711462 29711827 -73783147 + ORR1A0 LTR MaLR 1 346 0 3 811 13326 57 29 5 chr15 29711827 29713576 -73781398 + ORR1A0-int LTR MaLR 1 1792 0 3 811 2856 35 0 55 chr15 29713576 29713942 -73781032 + ORR1A0 LTR MaLR 1 346 0 3 811 2992 105 0 2 chr15 29714208 29714647 -73780327 - L1_Mus3 LINE L1 -169 6467 6030 3 811 756 82 14 22 chr15 29714647 29714817 -73780157 + L1_Mus3 LINE L1 6486 6638 0 3 811 483 135 44 22 chr15 29714878 29714969 -73780005 + MTD LTR MaLR 1 93 -328 3 811 1019 282 110 37 chr15 29715052 29715380 -73779594 + MTD LTR MaLR 66 417 -2 3 811 23 54 0 0 chr15 29715429 29715466 -73779508 + AT_rich Low_complexity Low_complexity 1 37 0 3 811 22 0 0 0 chr15 29716412 29716434 -73778540 + AT_rich Low_complexity Low_complexity 1 22 0 3 811 597 72 0 0 chr15 29716518 29716601 -73778373 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 3 811 421 344 0 0 chr15 29716795 29716920 -73778054 + B1_Mur1 SINE Alu 24 148 -1 3 811 273 283 97 39 chr15 29717313 29717416 -73777558 - MTE2b LTR MaLR -266 113 5 3 811 378 107 0 0 chr15 29717923 29717979 -73776995 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 811 2269 102 0 29 chr15 29718621 29718966 -73776008 + Lx3A LINE L1 6638 6972 -9 3 811 263 335 175 22 chr15 29719278 29719507 -73775467 + MLT2B2 LTR ERVL 125 388 -127 3 811 639 98 0 0 chr15 29719671 29719763 -73775211 + (TA)n Simple_repeat Simple_repeat 2 93 0 3 811 696 310 30 24 chr15 29719798 29720132 -73774842 - L1_Mur3 LINE L1 -547 5333 4998 3 811 278 50 0 24 chr15 29720164 29720205 -73774769 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 811 312 27 0 0 chr15 29720206 29720243 -73774731 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 811 186 176 0 0 chr15 29720258 29720309 -73774665 + GA-rich Low_complexity Low_complexity 2 52 0 3 811 267 278 0 32 chr15 29720333 29720480 -73774494 - L1_Rod LINE L1 -968 4918 4778 3 811 230 152 68 0 chr15 29720582 29720641 -73774333 - MusHAL1 LINE L1 -2160 552 490 3 811 462 252 118 45 chr15 29720664 29721024 -73773950 - L1M2 LINE L1 -2890 3256 2937 3 811 825 11 0 0 chr15 29721076 29721170 -73773804 + (TG)n Simple_repeat Simple_repeat 2 95 0 3 811 724 235 137 68 chr15 29721177 29721469 -73773505 + RLTR21 LTR ERVK 1261 1572 0 3 811 1351 274 42 6 chr15 29721505 29721839 -73773135 + ORR1D2 LTR MaLR 25 370 0 3 811 334 370 58 69 chr15 29722037 29722211 -73772763 + B4A SINE B4 1 172 -120 3 811 579 190 0 0 chr15 29722235 29722372 -73772602 + (CA)n Simple_repeat Simple_repeat 1 137 0 3 811 274 310 9 48 chr15 29723281 29723386 -73771588 + PB1D10 SINE Alu 2 102 -15 3 811 1350 34 6 16 chr15 29723391 29723573 -73771401 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 811 512 143 10 0 chr15 29723574 29723672 -73771302 + GA-rich Low_complexity Low_complexity 3 101 0 3 811 275 250 70 49 chr15 29723785 29724029 -73770945 - Lx9 LINE L1 -15 7629 7381 3 811 561 270 110 4 chr15 29724161 29724388 -73770586 - Lx9 LINE L1 -526 7118 6868 3 811 847 346 58 26 chr15 29724453 29724833 -73770141 - Lx9 LINE L1 -953 6691 6300 3 811 575 285 28 64 chr15 29724858 29725109 -73769865 - Lx9 LINE L1 -187 5660 5419 3 811 3149 228 53 136 chr15 29725123 29726343 -73768631 + L1_Rod LINE L1 3887 5075 -772 3 811 1292 61 0 0 chr15 29726343 29726508 -73768466 - L1Md_T LINE L1 -1 6581 6417 3 811 3149 228 53 136 chr15 29726508 29726940 -73768034 + L1_Rod LINE L1 5076 5401 -446 3 811 908 255 143 10 chr15 29727080 29727219 -73767755 - ORR1D1 LTR MaLR -65 329 163 3 811 300 83 0 0 chr15 29727219 29727267 -73767707 + (CAGA)n Simple_repeat Simple_repeat 2 49 0 3 811 908 253 144 4 chr15 29727267 29727401 -73767573 - ORR1D1 LTR MaLR -212 162 8 3 811 274 192 0 0 chr15 29727401 29727453 -73767521 + ORR1D2 LTR MaLR 319 370 0 3 811 2073 249 22 45 chr15 29727454 29728037 -73766937 + ORR1D2-int LTR MaLR 2 571 -799 3 811 296 83 83 0 chr15 29728216 29728288 -73766686 + A-rich Low_complexity Low_complexity 2 79 0 3 811 1352 124 0 0 chr15 29728506 29728700 -73766274 + RLTR44B LTR ERVK 1 194 -255 3 811 3403 319 66 47 chr15 29728705 29733188 -73761786 + IAP-d-int LTR ERVK 659 5118 -1424 3 811 5603 52 0 0 chr15 29733395 29734066 -73760908 + RLTR44-int LTR ERVK 2142 2812 0 3 811 1945 133 164 36 chr15 29734066 29734425 -73760549 + RLTR44A LTR ERVK 1 405 0 3 811 24 32 0 0 chr15 29734751 29734782 -73760192 + AT_rich Low_complexity Low_complexity 1 31 0 3 811 212 200 18 0 chr15 29735351 29735406 -73759568 + (TATATG)n Simple_repeat Simple_repeat 2 57 0 3 811 22 70 0 0 chr15 29735947 29735990 -73758984 + AT_rich Low_complexity Low_complexity 1 43 0 3 811 199 330 92 28 chr15 29736087 29736196 -73758778 - L2b LINE L2 -23 3352 3237 3 811 297 51 0 0 chr15 29737571 29737610 -73757364 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 811 441 50 0 0 chr15 29737610 29737670 -73757304 + (CAGAGA)n Simple_repeat Simple_repeat 2 61 0 3 811 4128 64 2 0 chr15 29737863 29738392 -73756582 - L1_Mus1 LINE L1 0 6567 6038 3 811 5035 71 8 0 chr15 29738873 29739532 -73755442 - L1_Mus1 LINE L1 0 6567 5904 3 811 898 287 275 36 chr15 29739748 29739995 -73754979 - RLTR16 LTR ERVK -39 466 160 3 811 243 0 0 0 chr15 29739995 29740022 -73754952 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 811 898 268 47 50 chr15 29740022 29740181 -73754793 - RLTR16 LTR ERVK -346 159 1 3 811 243 274 67 27 chr15 29742292 29742367 -73752607 - ORR1E LTR MaLR -264 95 18 3 811 1187 244 118 44 chr15 29742372 29742711 -73752263 - ORR1D1 LTR MaLR -8 366 3 3 811 342 327 31 25 chr15 29742863 29743023 -73751951 - RMER5 LTR ERV1 0 534 374 3 811 256 293 131 0 chr15 29743410 29743509 -73751465 + Lx8 LINE L1 6191 6302 -1171 3 811 3520 200 141 20 chr15 29743619 29744499 -73750475 + Lx5 LINE L1 6062 7047 -3 3 811 422 356 20 15 chr15 29744506 29744703 -73750271 + Lx8 LINE L1 7011 7208 -265 3 811 1968 85 13 67 chr15 29745100 29745414 -73749560 - L1_Mus2 LINE L1 0 6566 6270 3 811 3423 20 8 0 chr15 29745973 29746366 -73748608 + MTA_Mm LTR MaLR 1 396 0 3 811 585 322 118 34 chr15 29746565 29747186 -73747788 + L1MA6 LINE L1 5625 6297 -3 3 811 1242 282 17 27 chr15 29747984 29748395 -73746579 + Lx9 LINE L1 7077 7483 -161 3 811 256 279 111 25 chr15 29749172 29749253 -73745721 + MLT1A1 LTR MaLR 1 88 -320 3 811 764 87 0 8 chr15 29749352 29749480 -73745494 + (TC)n Simple_repeat Simple_repeat 1 127 0 3 811 504 0 0 0 chr15 29749609 29749665 -73745309 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 811 3722 163 176 16 chr15 29751734 29751753 -73743221 + RLTR25B LTR ERVK 109 127 -901 3 811 297 0 0 0 chr15 29751753 29751786 -73743188 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 811 3722 163 176 16 chr15 29751786 29752559 -73742415 + RLTR25B LTR ERVK 128 1028 0 3 811 691 265 63 30 chr15 29752578 29752815 -73742159 + B4 SINE B4 48 292 0 3 812 762 274 105 15 chr15 29753650 29753917 -73741057 - MTE-int LTR MaLR -1288 292 2 3 812 1857 259 80 0 chr15 29754157 29754643 -73740331 - RMER5 LTR ERV1 -9 525 1 3 812 1016 278 71 8 chr15 29754662 29754930 -73740044 - MTD LTR MaLR -134 285 1 3 812 309 344 64 18 chr15 29755568 29755849 -73739125 - L1ME1 LINE L1 -259 5920 5627 3 812 479 294 182 3 chr15 29756008 29756332 -73738642 - L1ME1 LINE L1 -1609 4537 4156 3 812 216 200 0 0 chr15 29756847 29756887 -73738087 - B3A SINE B2 -158 40 1 3 812 537 285 57 23 chr15 29757375 29757551 -73737423 - B3 SINE B2 -29 187 6 3 812 27 0 0 0 chr15 29759070 29759097 -73735877 + AT_rich Low_complexity Low_complexity 1 27 0 3 812 22 0 0 0 chr15 29759584 29759606 -73735368 + AT_rich Low_complexity Low_complexity 1 22 0 3 812 4601 179 20 13 chr15 29759629 29760479 -73734495 + RMER13A LTR ERVK 3 858 -2 3 812 1079 323 37 36 chr15 29760530 29761118 -73733856 - L1_Mur3 LINE L1 -1610 4270 3682 3 812 1275 174 139 14 chr15 29761370 29761650 -73733324 - ORR1A1 LTR MaLR 0 346 32 3 812 192 152 0 0 chr15 29761765 29761798 -73733176 + A-rich Low_complexity Low_complexity 1 33 0 3 812 1668 241 66 27 chr15 29761865 29762378 -73732596 + Lx7 LINE L1 5661 6193 -1503 3 812 2039 251 50 26 chr15 29762392 29762935 -73732039 + Lx6 LINE L1 6901 7456 -4 3 812 899 184 44 16 chr15 29763145 29763379 -73731595 - Lx4B LINE L1 -4 7054 6784 4 812 25 31 0 0 chr15 29763572 29763604 -73731370 + AT_rich Low_complexity Low_complexity 1 32 0 4 812 482 281 14 41 chr15 29763895 29764040 -73730934 - B1_Mur1 SINE Alu -8 141 1 4 812 364 357 120 14 chr15 29764293 29764509 -73730465 - Lx8 LINE L1 -146 7327 7089 4 812 426 299 87 25 chr15 29764718 29764919 -73730055 - B3A SINE B2 0 216 12 4 812 30 27 0 0 chr15 29765006 29765043 -73729931 + AT_rich Low_complexity Low_complexity 1 37 0 4 812 467 33 16 0 chr15 29765109 29765170 -73729804 + (TC)n Simple_repeat Simple_repeat 1 62 0 4 812 181 159 0 68 chr15 29765180 29765254 -73729720 + A-rich Low_complexity Low_complexity 2 70 0 4 812 488 300 70 5 chr15 29765267 29765468 -73729506 - Lx7 LINE L1 -395 7301 7088 4 812 607 300 100 23 chr15 29766284 29766594 -73728380 - Lx8 LINE L1 -31 7442 7109 4 812 303 28 0 0 chr15 29766672 29766708 -73728266 + (CTCA)n Simple_repeat Simple_repeat 2 37 0 4 812 316 369 0 8 chr15 29766708 29766832 -73728142 - Lx8 LINE L1 -482 6991 6868 4 812 306 0 0 0 chr15 29767625 29767659 -73727315 + (TC)n Simple_repeat Simple_repeat 2 35 0 4 812 489 110 0 0 chr15 29767659 29767731 -73727243 + (TG)n Simple_repeat Simple_repeat 2 74 0 4 812 702 299 11 16 chr15 29767821 29768011 -73726963 - B3 SINE B2 0 216 28 4 812 457 137 128 0 chr15 29768032 29768134 -73726840 - Lx5 LINE L1 -5 7045 6931 4 812 2008 164 96 25 chr15 29768122 29768560 -73726414 + Lx5 LINE L1 5996 6464 -586 4 812 217 128 26 0 chr15 29768560 29768599 -73726375 - B3 SINE B2 -176 40 1 4 812 697 160 297 8 chr15 29768627 29768883 -73726091 - Lx9 LINE L1 -3 7641 7312 4 812 302 0 26 0 chr15 29768886 29768924 -73726050 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 812 337 257 147 10 chr15 29768926 29769028 -73725946 - B4A SINE B4 -77 215 100 4 812 231 264 172 52 chr15 29769028 29769042 -73725932 - B1_Mus1 SINE Alu -12 136 7 4 812 207 0 0 0 chr15 29769518 29769541 -73725433 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 812 826 143 28 0 chr15 29769545 29769730 -73725244 - Lx2 LINE L1 -110 6887 6758 4 812 3422 124 4 9 chr15 29769730 29770266 -73724708 + Lx LINE L1 6121 6653 -1 4 812 477 0 0 0 chr15 29770542 29770595 -73724379 + (TC)n Simple_repeat Simple_repeat 1 53 0 4 812 504 0 0 0 chr15 29770595 29770650 -73724324 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 812 839 314 14 34 chr15 29771772 29772065 -73722909 + Lx8 LINE L1 7007 7293 -180 4 812 2047 60 287 0 chr15 29772217 29772531 -73722443 - MTB_Mm LTR MaLR 0 407 4 4 812 1368 217 87 33 chr15 29772563 29772896 -73722078 + ORR1D1 LTR MaLR 1 351 -23 4 812 200 111 0 22 chr15 29773005 29773051 -73721923 + (TTTTG)n Simple_repeat Simple_repeat 3 47 0 4 812 198 0 0 0 chr15 29773092 29773114 -73721860 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 4 812 839 164 15 0 chr15 29773119 29773253 -73721721 - B1_Mur4 SINE Alu -12 138 3 4 812 469 295 7 27 chr15 29773323 29773473 -73721501 - B1_Mur2 SINE Alu -1 148 2 4 812 400 320 18 49 chr15 29773479 29773541 -73721433 - Lx8 LINE L1 -128 7345 7288 4 812 2851 12 48 0 chr15 29773541 29773871 -73721103 + ORR1A0 LTR MaLR 1 346 0 4 812 400 320 18 49 chr15 29773871 29773972 -73721002 - Lx8 LINE L1 -186 7287 7188 4 812 22 0 0 0 chr15 29776002 29776024 -73718950 + AT_rich Low_complexity Low_complexity 1 22 0 4 812 31179 95 17 3 chr15 29776034 29782143 -73712831 - L1Md_F2 LINE L1 -12 6570 380 4 812 1527 203 86 6 chr15 29782152 29782465 -73712509 + RLTR17 LTR ERVK 355 692 0 4 812 24 32 0 0 chr15 29782473 29782504 -73712470 + AT_rich Low_complexity Low_complexity 1 31 0 4 812 489 314 42 8 chr15 29782541 29782660 -73712314 - RSINE1 SINE B4 -12 153 31 4 812 543 101 0 0 chr15 29782667 29782746 -73712228 + (TCCC)n Simple_repeat Simple_repeat 3 81 0 4 812 1920 198 66 50 chr15 29782769 29783285 -73711689 - RMER1C Other Other 0 1342 819 4 812 568 282 96 79 chr15 29783292 29783646 -73711328 - RLTR9A LTR ERVK 0 368 9 4 812 246 261 14 42 chr15 29783786 29783858 -73711116 - RLTR9A LTR ERVK -291 77 8 4 812 823 329 59 31 chr15 29783915 29784307 -73710667 - RMER1C Other Other -528 814 412 4 812 23 0 0 0 chr15 29784368 29784391 -73710583 + AT_rich Low_complexity Low_complexity 1 23 0 4 812 5163 100 32 6 chr15 29784596 29785409 -73709565 + Lx3_Mus LINE L1 5642 6475 -534 4 812 2500 136 0 13 chr15 29785541 29785936 -73709038 - Lx2 LINE L1 -1 6996 6607 4 812 435 19 0 0 chr15 29786029 29786081 -73708893 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 812 1561 169 48 23 chr15 29786456 29786765 -73708209 - RMER6C LTR ERVK 0 690 374 4 812 708 153 31 31 chr15 29786802 29786930 -73708044 - RMER6C LTR ERVK -562 128 1 4 812 802 307 94 37 chr15 29787008 29787334 -73707640 + MTE2a LTR MaLR 11 377 -2 4 812 312 309 168 16 chr15 29788079 29788270 -73706704 - MLT1B LTR MaLR -8 382 163 4 812 331 265 179 0 chr15 29788438 29788600 -73706374 - MLT-int LTR MaLR -15 1720 1530 4 812 390 57 0 0 chr15 29788618 29788671 -73706303 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 4 812 314 193 33 25 chr15 29788672 29788794 -73706180 + Lx9 LINE L1 7520 7642 -2 4 812 227 54 27 0 chr15 29788965 29789002 -73705972 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 4 812 1026 116 0 0 chr15 29789002 29789140 -73705834 - B1_Mus2 SINE Alu -9 138 1 4 812 1194 248 131 8 chr15 29789583 29789628 -73705346 - MTD LTR MaLR -8 411 367 4 812 2038 60 43 88 chr15 29789628 29789957 -73705017 + L1_Mus2 LINE L1 6237 6550 -16 4 812 498 17 0 0 chr15 29789959 29790018 -73704956 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 812 1194 248 131 8 chr15 29790018 29790335 -73704639 - MTD LTR MaLR -53 366 7 4 812 306 359 110 0 chr15 29790337 29790463 -73704511 - MLT-int LTR MaLR -1158 577 446 4 812 2207 93 9 27 chr15 29790463 29790545 -73704429 + Lx LINE L1 6326 6407 -247 4 812 7350 57 1 1 chr15 29790545 29791438 -73703536 - RLTR13B1 LTR ERVK 0 893 1 4 812 2207 93 9 27 chr15 29791438 29791685 -73703289 + Lx LINE L1 6408 6649 -5 4 812 306 359 110 0 chr15 29791685 29791803 -73703171 - MLT-int LTR MaLR -1290 445 307 4 812 432 374 68 8 chr15 29793078 29793315 -73701659 - LTR16C LTR ERVL -56 433 183 4 812 1194 286 8 74 chr15 29793628 29794021 -73700953 + MTE2b LTR MaLR 5 371 -8 4 812 2410 80 9 3 chr15 29794740 29795065 -73699909 - ORR1A2 LTR MaLR 0 327 1 4 812 1325 200 48 3 chr15 29795122 29795433 -73699541 - Lx5 LINE L1 -956 6094 5770 4 812 2308 227 48 12 chr15 29795427 29796007 -73698967 + Lx5 LINE L1 6070 6670 -380 4 812 303 87 0 0 chr15 29796145 29796191 -73698783 - L1Md_T LINE L1 -1596 4287 4242 4 812 13146 18 1 0 chr15 29796190 29798167 -73696807 + L1Md_T LINE L1 4295 6272 -310 4 812 297 0 0 0 chr15 29799028 29799061 -73695913 + (A)n Simple_repeat Simple_repeat 1 33 0 4 812 283 352 55 7 chr15 29799689 29799835 -73695139 + MER58A DNA MER1_type 45 197 -27 4 812 1304 55 0 0 chr15 29799839 29800004 -73694970 + L1_Mus1 LINE L1 6402 6566 -1 4 812 27 0 0 0 chr15 29800004 29800031 -73694943 + AT_rich Low_complexity Low_complexity 1 27 0 4 812 1171 266 133 32 chr15 29800269 29800442 -73694532 - Lx7 LINE L1 -1369 6327 6112 4 812 765 33 0 0 chr15 29800442 29800534 -73694440 + (TC)n Simple_repeat Simple_repeat 2 93 0 4 812 1171 266 133 32 chr15 29800534 29800835 -73694139 - Lx7 LINE L1 -1585 6111 5789 4 812 1032 134 76 0 chr15 29800835 29801007 -73693967 - B2_Mm2 SINE B2 -9 186 2 4 812 1171 266 133 32 chr15 29801007 29801066 -73693908 - Lx7 LINE L1 -1908 5788 5739 4 812 1571 238 60 3 chr15 29801071 29801437 -73693537 + Lx6 LINE L1 6905 7291 -169 4 812 281 286 46 37 chr15 29801499 29801608 -73693366 + Lx7 LINE L1 7189 7298 -398 4 812 30 27 0 0 chr15 29801842 29801879 -73693095 + AT_rich Low_complexity Low_complexity 1 37 0 4 812 1883 177 73 3 chr15 29801896 29802236 -73692738 + MTC LTR MaLR 1 364 -57 4 812 408 40 0 0 chr15 29802647 29802697 -73692277 + (TTGG)n Simple_repeat Simple_repeat 1 50 0 4 812 7833 35 39 8 chr15 29803636 29804698 -73690276 - L1Md_F2 LINE L1 -11 6571 5402 4 812 186 43 0 0 chr15 29805506 29805529 -73689445 + (A)n Simple_repeat Simple_repeat 1 23 0 4 812 24 0 0 0 chr15 29805654 29805678 -73689296 + AT_rich Low_complexity Low_complexity 1 24 0 4 812 5297 174 80 8 chr15 29805793 29806861 -73688113 - Lx5 LINE L1 -3 7047 5903 4 812 207 100 0 0 chr15 29807253 29807283 -73687691 + (TTTTTA)n Simple_repeat Simple_repeat 3 32 0 4 812 888 248 39 10 chr15 29807600 29807804 -73687170 + B3 SINE B2 5 214 -2 4 812 950 140 92 15 chr15 29808382 29808578 -73686396 + RMER4A LTR ERVK 256 466 0 4 812 1280 272 78 29 chr15 29808578 29808991 -73685983 + MTD-int LTR MaLR 610 1042 -216 4 812 673 35 74 58 chr15 29809020 29809141 -73685833 - L1_Mus3 LINE L1 -1 6637 6515 4 812 4688 223 64 10 chr15 29809173 29810261 -73684713 - Lx6 LINE L1 -2 7458 6312 4 812 679 122 24 0 chr15 29810265 29810388 -73684586 + Lx6 LINE L1 5694 5819 -61 4 812 652 206 51 13 chr15 29810380 29810537 -73684437 + Lx6 LINE L1 6096 6258 -1202 4 812 325 128 115 0 chr15 29810653 29810731 -73684243 - Lx3C LINE L1 -74 6902 6816 4 812 408 257 10 0 chr15 29810731 29810832 -73684142 + MTD-int LTR MaLR 1157 1258 0 4 812 1363 298 19 13 chr15 29810852 29811229 -73683745 + MTD LTR MaLR 29 407 -12 4 812 206 174 22 0 chr15 29811468 29811514 -73683460 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 812 322 279 48 61 chr15 29813093 29813219 -73681755 - B1F SINE Alu 0 149 1 4 812 185 83 0 27 chr15 29813316 29813353 -73681621 + (ATG)n Simple_repeat Simple_repeat 1 36 0 4 812 1145 268 118 3 chr15 29814229 29814577 -73680397 + Lx6 LINE L1 7070 7457 -3 4 812 944 197 18 31 chr15 29815419 29815644 -73679330 - URR1A DNA MER1_type 0 226 5 4 812 1374 256 249 4 chr15 29815672 29815738 -73679236 - RMER1B Other Other -51 1015 918 4 812 519 60 0 0 chr15 29815738 29815805 -73679169 + (TA)n Simple_repeat Simple_repeat 2 68 0 4 812 1878 266 139 37 chr15 29815805 29816641 -73678333 - RMER1A Other Other -149 917 1 4 812 360 0 0 0 chr15 29816641 29816681 -73678293 + (TC)n Simple_repeat Simple_repeat 2 41 0 4 812 1391 252 15 99 chr15 29816681 29816920 -73678054 - RMER1B Other Other -790 276 45 4 812 4382 147 22 12 chr15 29817322 29818052 -73676922 - RMER19A LTR ERVK 0 737 1 4 812 427 221 276 0 chr15 29818279 29818406 -73676568 + RMER6C LTR ERVK 7 168 -522 5 812 264 30 0 0 chr15 29818420 29818453 -73676521 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 812 8054 25 1 0 chr15 29818827 29819950 -73675024 - L1Md_A LINE L1 -1 6581 5458 5 812 5770 14 0 0 chr15 29819949 29820646 -73674328 + L1Md_A LINE L1 4756 5452 -431 5 812 22 0 0 0 chr15 29820747 29820769 -73674205 + AT_rich Low_complexity Low_complexity 1 22 0 5 812 474 75 0 0 chr15 29821488 29821555 -73673419 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 812 216 281 18 0 chr15 29821956 29822013 -73672961 + MIR3 SINE MIR 129 186 -22 5 812 244 230 125 11 chr15 29823170 29823258 -73671716 - L1MD1 LINE L1 -8 6234 6137 5 812 2615 143 85 9 chr15 29823359 29823817 -73671157 - RMER19A LTR ERVK 0 737 245 5 812 1227 67 0 0 chr15 29823817 29823981 -73670993 - Lx LINE L1 -850 5804 5641 5 812 2897 115 7 2 chr15 29823982 29824425 -73670549 + Lx2 LINE L1 6321 6765 -232 5 812 2961 38 11 3 chr15 29824985 29825351 -73669623 - L1Md_F2 LINE L1 0 6582 6214 5 812 917 157 38 20 chr15 29825591 29825937 -73669037 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 5 812 221 77 51 0 chr15 29825940 29825979 -73668995 + (CATA)n Simple_repeat Simple_repeat 4 44 0 5 812 690 297 82 5 chr15 29826044 29826264 -73668710 - MLT2B4 LTR ERVL -316 240 4 5 812 318 250 0 0 chr15 29826356 29826420 -73668554 + B1F SINE Alu 46 109 -40 5 812 634 184 0 13 chr15 29826450 29826540 -73668434 + (TA)n Simple_repeat Simple_repeat 1 89 0 5 812 1032 151 0 0 chr15 29826540 29826719 -73668255 + (TATG)n Simple_repeat Simple_repeat 2 180 0 5 812 634 184 0 13 chr15 29826719 29826777 -73668197 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 812 987 246 157 2 chr15 29827263 29827595 -73667379 - MTD LTR MaLR -14 405 21 5 812 2556 108 49 183 chr15 29827683 29828252 -73666722 + MT2_Mm LTR ERVL 1 493 0 5 812 12459 68 19 1 chr15 29828252 29829957 -73665017 + ORR1A1-int LTR MaLR 1 1736 -56 5 812 2331 71 64 9 chr15 29829957 29830285 -73664689 + ORR1A1 LTR MaLR 1 346 0 5 812 283 268 11 23 chr15 29830502 29830590 -73664384 - Lx8 LINE L1 -299 7174 7088 5 812 337 335 46 11 chr15 29830625 29830800 -73664174 - Lx8 LINE L1 -511 6962 6782 5 812 330 48 0 0 chr15 29830797 29830839 -73664135 - L1_Mm LINE L1 -899 4984 4943 5 812 3949 77 9 21 chr15 29830839 29831396 -73663578 + L1Md_F2 LINE L1 6031 6580 -2 5 812 758 309 97 31 chr15 29831485 29831939 -73663035 - Lx8 LINE L1 -734 6739 6256 5 812 255 250 0 0 chr15 29831968 29832024 -73662950 + MLT1D LTR MaLR 398 453 -52 5 812 34104 69 4 5 chr15 29832020 29838166 -73656808 - L1Md_F3 LINE L1 -1 6583 441 5 812 262 177 29 114 chr15 29838179 29838249 -73656725 + MLT1D LTR MaLR 441 504 -1 5 812 1034 65 72 0 chr15 29838300 29838438 -73656536 + B1_Mus1 SINE Alu 1 148 0 5 812 209 167 18 18 chr15 29838444 29838456 -73656518 + A-rich Low_complexity Low_complexity 4 15 0 5 812 297 0 0 0 chr15 29838456 29838489 -73656485 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 812 209 167 18 18 chr15 29838489 29838531 -73656443 + A-rich Low_complexity Low_complexity 16 58 0 5 812 488 282 149 72 chr15 29839142 29839337 -73655637 + B4A SINE B4 27 236 -56 5 812 399 209 0 0 chr15 29839444 29839549 -73655425 + (CA)n Simple_repeat Simple_repeat 2 106 0 5 812 302 91 0 43 chr15 29839551 29839597 -73655377 + HAL1-3A_ME LINE L1 1975 2018 -840 5 812 3030 169 166 108 chr15 29840370 29841211 -73653763 - RMER19B LTR ERVK -12 890 1 5 812 3901 36 2 8 chr15 29842299 29842773 -73652201 + L1Md_F2 LINE L1 6099 6569 -13 5 812 1905 84 47 7 chr15 29844526 29844800 -73650174 + L1_Mus2 LINE L1 6280 6564 -2 5 812 264 343 0 0 chr15 29844823 29844893 -73650081 + RSINE1 SINE B4 92 161 -4 5 812 677 45 11 0 chr15 29844912 29845001 -73649973 + (TAGA)n Simple_repeat Simple_repeat 3 92 0 5 812 28 48 0 0 chr15 29845017 29845059 -73649915 + AT_rich Low_complexity Low_complexity 1 42 0 5 812 303 49 0 0 chr15 29845466 29845507 -73649467 + (T)n Simple_repeat Simple_repeat 1 41 0 5 812 404 345 21 38 chr15 29849723 29849961 -73645013 + MLT1C LTR MaLR 15 248 -219 5 812 420 136 0 0 chr15 29850592 29850680 -73644294 + (TC)n Simple_repeat Simple_repeat 1 88 0 5 812 327 305 101 22 chr15 29850821 29850999 -73643975 - L1M4 LINE L1 -677 5507 5316 5 812 449 257 14 0 chr15 29851077 29851225 -73643749 - L1M2 LINE L1 -873 5270 5121 5 812 302 198 8 0 chr15 29851256 29851377 -73643597 - Lx3C LINE L1 -2 6974 6810 5 812 25 51 0 0 chr15 29851546 29851585 -73643389 + AT_rich Low_complexity Low_complexity 1 39 0 5 812 16582 66 5 1 chr15 29852397 29854702 -73640272 - L1Md_F2 LINE L1 -1416 4467 2153 5 812 7660 84 2 17 chr15 29854702 29855315 -73639659 + L1Md_F2 LINE L1 4468 5077 -806 5 812 5036 68 0 3 chr15 29855315 29855967 -73639007 + L1Md_F2 LINE L1 5920 6569 -13 5 812 7660 84 2 17 chr15 29855967 29856488 -73638486 + L1Md_F2 LINE L1 5078 5585 -298 5 812 7723 60 3 3 chr15 29856489 29857473 -73637501 + L1Md_F2 LINE L1 5587 6570 -12 5 812 2031 165 24 21 chr15 29857490 29857911 -73637063 + Lx LINE L1 6162 6583 -71 5 812 7412 54 6 2 chr15 29857922 29859353 -73635621 - L1Md_F3 LINE L1 -14 6570 5135 5 812 327 179 50 0 chr15 29859343 29859450 -73635524 + Lx LINE L1 6569 6653 -1 5 812 1624 79 12 24 chr15 29859463 29859710 -73635264 + L1_Mus3 LINE L1 6222 6465 -173 5 812 233 128 21 0 chr15 29860208 29860255 -73634719 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 5 812 2733 68 40 127 chr15 29860568 29861071 -73633903 - L1_Mus3 LINE L1 0 6638 6180 5 812 738 306 111 61 chr15 29861799 29862158 -73632816 + MTEa LTR MaLR 1 377 -2 5 812 195 69 0 0 chr15 29862275 29862304 -73632670 + (T)n Simple_repeat Simple_repeat 1 29 0 5 812 1208 48 0 0 chr15 29862304 29862451 -73632523 - B1_Mus2 SINE Alu 0 147 1 5 812 21 36 0 0 chr15 29863694 29863722 -73631252 + AT_rich Low_complexity Low_complexity 1 28 0 5 812 531 356 5 49 chr15 29863807 29864011 -73630963 + B4A SINE B4 2 196 -96 5 812 579 276 13 33 chr15 29864064 29864117 -73630857 + B1_Mur2 SINE Alu 3 54 -95 5 812 3259 20 22 27 chr15 29864117 29864530 -73630444 + IAPLTR2a LTR ERVK 1 411 0 5 812 579 276 13 33 chr15 29864530 29864626 -73630348 + B1_Mur2 SINE Alu 55 149 0 5 812 608 94 19 9 chr15 29865832 29865939 -73629035 + Lx3A LINE L1 6861 6968 -13 5 812 387 0 0 0 chr15 29865939 29865982 -73628992 + (CATA)n Simple_repeat Simple_repeat 2 44 0 5 812 706 286 84 17 chr15 29866017 29866372 -73628602 - Lx8 LINE L1 -2 7471 7093 5 812 246 367 0 0 chr15 29866477 29866567 -73628407 - MLT1D LTR MaLR 0 505 416 5 812 636 109 0 0 chr15 29867398 29867490 -73627484 - RMER2 LTR ERV1 -475 92 1 5 812 489 306 90 0 chr15 29867684 29867828 -73627146 - B4A SINE B4 -4 288 132 5 812 7886 41 3 0 chr15 29868985 29870148 -73624826 - L1Md_F2 LINE L1 -4 6578 5413 5 812 2408 71 3 0 chr15 29870144 29870481 -73624493 + L1Md_F2 LINE L1 5065 5402 -481 5 812 277 197 53 0 chr15 29871336 29871412 -73623562 + (TA)n Simple_repeat Simple_repeat 1 80 0 5 812 200 35 35 0 chr15 29871440 29871469 -73623505 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 5 812 408 20 0 0 chr15 29871899 29871948 -73623026 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 5 812 920 53 0 0 chr15 29871948 29872062 -73622912 - B1_Mus2 SINE Alu -11 136 23 5 812 426 85 0 0 chr15 29872100 29872159 -73622815 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 5 812 5873 102 7 6 chr15 29872159 29873008 -73621966 - Lx LINE L1 -14 6640 5791 5 812 258 200 0 0 chr15 29873008 29873063 -73621911 + RMER17C LTR ERVK 331 385 -25 5 812 3825 48 2 0 chr15 29873685 29874180 -73620794 + L1Md_F2 LINE L1 5091 5586 -297 5 812 8168 42 5 0 chr15 29874180 29875169 -73619805 + L1Md_F2 LINE L1 5587 6580 -2 5 812 41 58 0 0 chr15 29875169 29875238 -73619736 + AT_rich Low_complexity Low_complexity 1 69 0 5 812 726 23 0 0 chr15 29875430 29875518 -73619456 + (TG)n Simple_repeat Simple_repeat 2 89 0 5 812 682 321 125 34 chr15 29875795 29876179 -73618795 - MTD LTR MaLR 0 419 1 5 812 29 0 0 0 chr15 29878560 29878589 -73616385 + AT_rich Low_complexity Low_complexity 1 29 0 5 812 198 338 24 67 chr15 29879589 29879754 -73615220 - L4 LINE RTE -1000 1029 872 5 812 28 0 0 0 chr15 29879847 29879875 -73615099 + AT_rich Low_complexity Low_complexity 1 28 0 5 812 226 274 20 0 chr15 29880066 29880117 -73614857 + ID4 SINE ID 9 60 -23 5 812 6131 36 1 0 chr15 29880942 29881671 -73613303 + L1Md_A LINE L1 5851 6580 -2 5 812 210 192 58 0 chr15 29881833 29881885 -73613089 + A-rich Low_complexity Low_complexity 4 58 0 5 812 728 298 147 10 chr15 29882339 29882651 -73612323 + Lx8 LINE L1 6982 7336 -137 5 812 1418 111 20 12 chr15 29882659 29882914 -73612060 - Lx3_Mus LINE L1 -741 6268 6012 5 812 5647 80 14 3 chr15 29882915 29883679 -73611295 + Lx3_Mus LINE L1 6237 7009 0 5 812 3367 28 2 10 chr15 29883790 29884189 -73610785 - MTA_Mm LTR MaLR 0 396 1 5 101 8645 23 4 1 chr15 29884189 29885245 -73609729 - MTA_Mm-int LTR MaLR 0 1098 40 5 813 617 25 0 12 chr15 29885245 29885325 -73609649 + (TAGA)n Simple_repeat Simple_repeat 2 80 0 5 813 232 197 34 34 chr15 29885716 29885863 -73609111 + (TA)n Simple_repeat Simple_repeat 1 147 0 5 813 391 278 88 20 chr15 29885905 29886052 -73608922 - Lx8 LINE L1 -195 7278 7122 5 813 1551 332 61 42 chr15 29886168 29887609 -73607365 - Lx8 LINE L1 -357 7116 5610 5 813 507 33 0 0 chr15 29887611 29887672 -73607302 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 813 261 98 0 0 chr15 29887701 29887742 -73607232 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 813 331 49 0 0 chr15 29887765 29887806 -73607168 - HAL1-3A_ME LINE L1 -840 2018 1978 5 813 231 234 0 0 chr15 29887827 29887874 -73607100 - Lx8 LINE L1 -2061 5635 5589 5 813 504 156 8 15 chr15 29887882 29888012 -73606962 + (TG)n Simple_repeat Simple_repeat 2 130 0 5 813 231 234 0 0 chr15 29888013 29888060 -73606914 - Lx8 LINE L1 -2061 5635 5589 5 813 387 167 9 17 chr15 29888068 29888184 -73606790 + (TG)n Simple_repeat Simple_repeat 2 116 0 5 813 750 267 76 27 chr15 29888184 29888252 -73606722 - Lx8 LINE L1 -233 5647 5566 5 813 332 43 22 0 chr15 29888252 29888298 -73606676 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 813 750 267 76 27 chr15 29888298 29888598 -73606376 - Lx8 LINE L1 -315 5565 5261 5 813 449 235 46 17 chr15 29888594 29888767 -73606207 + L1_Mur3 LINE L1 4089 4266 -1614 5 813 227 129 31 31 chr15 29889318 29889445 -73605529 + (TTTG)n Simple_repeat Simple_repeat 1 127 0 5 813 301 314 88 11 chr15 29892185 29892468 -73602506 - L1MA7 LINE L1 -173 6118 5814 5 813 228 241 36 60 chr15 29892544 29892628 -73602346 + ORR1A3 LTR MaLR 80 161 -165 5 813 702 0 0 0 chr15 29892674 29892752 -73602222 + (GAGAA)n Simple_repeat Simple_repeat 3 80 0 6 813 1146 115 0 0 chr15 29892752 29892925 -73602049 + (GGGGA)n Simple_repeat Simple_repeat 5 178 0 6 813 265 194 13 53 chr15 29893306 29893382 -73601592 - L1MC LINE L1 -2333 3813 3741 6 813 1286 241 48 30 chr15 29893730 29894123 -73600851 + RMER1C Other Other 890 1289 -53 6 813 1733 43 0 0 chr15 29894132 29894341 -73600633 + L1_Mus1 LINE L1 6356 6564 -3 6 813 31 0 0 0 chr15 29895353 29895384 -73599590 + AT_rich Low_complexity Low_complexity 1 31 0 6 813 26 0 0 0 chr15 29895887 29895913 -73599061 + AT_rich Low_complexity Low_complexity 1 26 0 6 813 2763 227 76 3 chr15 29896732 29897440 -73597534 + Lx5 LINE L1 6286 7045 -5 6 813 587 149 9 0 chr15 29897593 29897700 -73597274 + (TA)n Simple_repeat Simple_repeat 2 109 0 6 813 1021 295 75 18 chr15 29897932 29898332 -73596642 - Lx9 LINE L1 -314 7330 6908 6 813 1428 234 129 14 chr15 29898336 29898469 -73596505 - Lx9 LINE L1 -7 7637 7480 6 813 549 0 0 0 chr15 29898469 29898530 -73596444 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 813 1428 234 129 14 chr15 29898530 29898915 -73596059 - Lx9 LINE L1 -165 7479 7059 6 813 253 159 0 0 chr15 29898915 29898959 -73596015 + Lx9 LINE L1 7023 7066 -578 6 813 739 352 11 19 chr15 29899074 29899343 -73595631 - B4A SINE B4 -25 267 1 6 813 323 307 61 38 chr15 29899421 29899553 -73595421 - MER68 LTR ERVL -7 556 422 6 813 8789 23 0 1 chr15 29899553 29900624 -73594350 + L1Md_A LINE L1 4517 5586 -297 6 813 8506 31 0 0 chr15 29900625 29901620 -73593354 + L1Md_A LINE L1 5588 6582 0 6 813 317 280 49 20 chr15 29901622 29901724 -73593250 - MER68 LTR ERVL -133 430 326 6 813 2154 254 70 26 chr15 29902628 29903275 -73591699 - Lx6 LINE L1 -42 7418 6744 6 813 339 130 0 0 chr15 29904390 29904444 -73590530 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 813 1213 267 105 3 chr15 29904508 29904842 -73590132 - MTD LTR MaLR -6 413 46 6 813 1574 154 65 65 chr15 29905114 29905468 -73589506 - RLTR15 LTR ERVK -5 354 1 6 813 207 333 61 12 chr15 29905502 29905584 -73589390 - MIR SINE MIR -157 105 20 6 813 207 162 0 0 chr15 29905729 29905766 -73589208 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 813 1038 320 43 35 chr15 29905781 29906433 -73588541 - Lx9 LINE L1 -142 7502 6846 6 813 440 328 0 0 chr15 29906439 29906570 -73588404 - Lx9 LINE L1 -1067 6577 6447 6 813 2628 267 90 50 chr15 29908032 29909484 -73585490 - Lx9 LINE L1 -1673 5971 4444 6 813 342 0 0 0 chr15 29909737 29909775 -73585199 + (GA)n Simple_repeat Simple_repeat 1 38 0 6 813 1728 58 0 9 chr15 29910551 29910775 -73584199 - L1_Mus1 LINE L1 0 6567 6346 6 813 1588 76 5 5 chr15 29910775 29910999 -73583975 + L1_Mus1 LINE L1 6108 6331 -236 6 813 21 0 0 0 chr15 29911025 29911046 -73583928 + AT_rich Low_complexity Low_complexity 1 21 0 6 813 821 300 90 33 chr15 29911163 29911894 -73583080 + L1_Mur3 LINE L1 4255 5026 -1117 6 813 958 53 0 8 chr15 29911894 29912026 -73582948 + L1Md_F2 LINE L1 6440 6570 -12 6 813 821 317 139 24 chr15 29912026 29912765 -73582209 + L1_Mur3 LINE L1 4995 5861 -19 6 813 342 327 48 18 chr15 29912992 29913160 -73581814 - L1M2 LINE L1 -815 5328 5156 6 813 432 0 0 0 chr15 29913221 29913269 -73581705 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 813 36825 9 0 1 chr15 29913321 29919384 -73575590 + L1Md_A LINE L1 1 5586 -297 6 813 9075 2 0 0 chr15 29919384 29920380 -73574594 + L1Md_A LINE L1 5587 6582 0 6 813 1717 159 83 21 chr15 29921661 29922034 -73572940 - Lx LINE L1 0 6654 6259 6 813 831 295 73 57 chr15 29922036 29922120 -73572854 - MTE2b LTR MaLR -58 321 235 6 813 1386 72 0 0 chr15 29922120 29922301 -73572673 + L1Md_T LINE L1 6402 6582 0 6 813 831 295 73 57 chr15 29922301 29922532 -73572442 - MTE2b LTR MaLR -145 234 2 6 813 288 235 89 19 chr15 29922643 29922795 -73572179 + L1_Mur3 LINE L1 5593 5798 -505 6 813 21 36 0 0 chr15 29923140 29923168 -73571806 + AT_rich Low_complexity Low_complexity 1 28 0 6 813 798 254 78 30 chr15 29923239 29923610 -73571364 + MYSERV16_I-int LTR ERVK 74 424 -1902 6 813 7931 105 11 3 chr15 29923646 29924961 -73570013 + Lx3C LINE L1 5478 6799 -177 6 813 228 67 0 0 chr15 29924994 29925024 -73569950 + (T)n Simple_repeat Simple_repeat 1 30 0 6 813 7603 54 2 1 chr15 29925049 29926630 -73568344 - L1Md_F2 LINE L1 -12 6570 4987 6 813 34648 63 1 13 chr15 29926626 29932777 -73562197 - L1Md_T LINE L1 0 6582 511 6 813 736 296 45 4 chr15 29932777 29933101 -73561873 - RMER1A Other Other -578 452 7 6 813 1334 242 90 9 chr15 29933086 29933432 -73561542 - RMER1B Other Other -648 418 45 6 813 611 26 13 0 chr15 29933878 29933955 -73561019 + (TC)n Simple_repeat Simple_repeat 2 79 0 6 813 2612 202 4 22 chr15 29934033 29934570 -73560404 - Lx2B LINE L1 -14 6986 6460 6 813 548 294 62 29 chr15 29935212 29935632 -73559342 + L1M2 LINE L1 3670 4103 -2040 6 813 1095 72 0 0 chr15 29935712 29935851 -73559123 + B1_Mus2 SINE Alu 1 139 -8 6 813 210 37 0 0 chr15 29935851 29935878 -73559096 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 813 23 33 0 0 chr15 29936433 29936463 -73558511 + AT_rich Low_complexity Low_complexity 1 30 0 6 813 408 344 44 13 chr15 29936600 29936759 -73558215 + B3 SINE B2 11 174 -42 6 813 586 338 99 28 chr15 29938272 29938510 -73556464 - MLT1A0 LTR MaLR -17 348 95 6 813 1353 152 9 0 chr15 29938510 29938734 -73556240 - URR1A DNA MER1_type 0 226 1 6 813 586 338 99 28 chr15 29938734 29938818 -73556156 - MLT1A0 LTR MaLR -271 94 3 6 813 1067 220 20 131 chr15 29940213 29940251 -73554723 - MT2B LTR ERVL -10 591 560 6 813 699 44 0 0 chr15 29940251 29940342 -73554632 + (TC)n Simple_repeat Simple_repeat 2 92 0 6 813 1067 220 20 131 chr15 29940342 29940373 -73554601 - MT2B LTR ERVL -42 559 547 6 813 2111 127 19 6 chr15 29940373 29940698 -73554276 - ORR1A4 LTR MaLR 0 329 1 6 813 515 56 14 0 chr15 29940698 29940769 -73554205 + (TATG)n Simple_repeat Simple_repeat 2 73 0 6 813 1067 250 43 114 chr15 29940769 29941218 -73553756 - MT2B LTR ERVL -55 546 7 6 813 3059 142 50 10 chr15 29941315 29941819 -73553155 + RLTR17 LTR ERVK 98 621 -71 6 813 366 23 0 0 chr15 29941848 29941891 -73553083 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 6 813 1671 168 85 21 chr15 29943011 29943351 -73551623 + ORR1B2 LTR MaLR 5 366 -1 6 813 2124 78 6 44 chr15 29943845 29944165 -73550809 - L1_Mus2 LINE L1 -2 6564 6257 6 813 371 160 110 0 chr15 29944885 29944985 -73549989 - Lx9 LINE L1 -1 7643 7533 6 813 324 0 0 0 chr15 29944986 29945022 -73549952 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 813 285 306 63 47 chr15 29946384 29946511 -73548463 - MTEb LTR MaLR -11 368 240 6 813 342 0 0 0 chr15 29947864 29947902 -73547072 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 813 189 0 0 0 chr15 29948282 29948303 -73546671 + (T)n Simple_repeat Simple_repeat 1 21 0 6 813 345 47 0 0 chr15 29948364 29948407 -73546567 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 813 346 281 162 26 chr15 29948417 29948534 -73546440 - ID_B1 SINE B4 -8 216 84 6 813 1718 247 32 9 chr15 29948595 29949036 -73545938 - Lx6 LINE L1 -11 7449 6999 6 813 5733 232 82 50 chr15 29949037 29949497 -73545477 - RLTR22_Mur LTR ERVK -178 1670 931 6 813 588 29 0 0 chr15 29949497 29949567 -73545407 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 813 5733 203 101 31 chr15 29949567 29950811 -73544163 - RLTR22_Mur LTR ERVK -507 1341 3 6 813 1690 269 67 41 chr15 29950815 29951071 -73543903 - Lx6 LINE L1 -460 7000 6738 6 813 267 103 0 0 chr15 29951071 29951110 -73543864 + (CTTG)n Simple_repeat Simple_repeat 1 39 0 6 813 1690 269 67 41 chr15 29951110 29951438 -73543536 - Lx6 LINE L1 -723 6737 6401 6 813 279 0 0 0 chr15 29951548 29951579 -73543395 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 6 813 3406 48 2 2 chr15 29951701 29952121 -73542853 - L1Md_F2 LINE L1 0 6582 6163 6 813 21 0 0 0 chr15 29953021 29953042 -73541932 + AT_rich Low_complexity Low_complexity 1 21 0 6 813 279 0 0 0 chr15 29953203 29953234 -73541740 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 813 363 252 26 35 chr15 29953249 29953364 -73541610 - L1_Mur2 LINE L1 -88 5789 5676 6 813 1067 287 86 19 chr15 29953343 29953702 -73541272 - Lx7 LINE L1 -679 7017 6635 6 813 397 274 105 57 chr15 29953764 29953973 -73541001 - Lx9 LINE L1 -451 7193 6975 6 813 332 293 137 67 chr15 29954226 29954440 -73540534 - L1MB8 LINE L1 -57 6121 5895 6 813 436 111 11 11 chr15 29954440 29954531 -73540443 + (TA)n Simple_repeat Simple_repeat 1 91 0 6 813 288 0 0 0 chr15 29954531 29954562 -73540412 + (GA)n Simple_repeat Simple_repeat 2 33 0 6 813 332 293 137 67 chr15 29954562 29954705 -73540269 - L1MB8 LINE L1 -284 5894 5739 6 813 395 92 15 0 chr15 29954747 29954812 -73540162 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 813 333 339 151 12 chr15 29955286 29955531 -73539443 - L1M5 LINE L1 -1326 4820 4542 6 813 306 230 13 26 chr15 29956205 29956281 -73538693 - L1M5 LINE L1 -2682 3464 3390 6 813 349 220 73 52 chr15 29956288 29956384 -73538590 + ID_B1 SINE B4 3 100 -124 6 813 270 81 0 0 chr15 29956550 29956587 -73538387 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 813 689 271 54 43 chr15 29956949 29957134 -73537840 + B3 SINE B2 2 188 -28 6 813 219 146 0 0 chr15 29960272 29960313 -73534661 + (T)n Simple_repeat Simple_repeat 1 41 0 6 813 987 282 67 3 chr15 29960313 29960644 -73534330 - Lx8 LINE L1 -123 7350 6999 6 813 1346 256 194 13 chr15 29960673 29960744 -73534230 - RMER1B Other Other -58 1008 936 6 813 189 0 0 0 chr15 29960744 29960765 -73534209 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 6 813 1382 232 258 21 chr15 29960765 29961497 -73533477 - RMER1A Other Other -131 935 1 6 813 265 273 0 38 chr15 29961492 29961572 -73533402 - Lx8 LINE L1 -466 7007 6931 6 813 22 0 0 0 chr15 29961998 29962020 -73532954 + AT_rich Low_complexity Low_complexity 1 22 0 6 813 1541 159 45 51 chr15 29962774 29963105 -73531869 - ORR1A4 LTR MaLR 0 329 1 6 813 528 143 0 0 chr15 29963133 29963231 -73531743 + (TC)n Simple_repeat Simple_repeat 2 99 0 6 813 368 143 12 0 chr15 29963841 29963925 -73531049 + GA-rich Low_complexity Low_complexity 2 86 0 6 813 225 320 38 57 chr15 29964239 29964345 -73530629 + L2b LINE L2 3272 3375 0 6 813 374 271 114 0 chr15 29965680 29965815 -73529159 + MTE2b LTR MaLR 2 152 -227 6 813 1712 161 99 106 chr15 29966750 29966939 -73528035 + MTC LTR MaLR 1 205 -216 6 813 2615 141 15 21 chr15 29966939 29967228 -73527746 + Lx LINE L1 6188 6473 -181 6 813 3327 40 2 0 chr15 29967228 29967623 -73527351 + MTA_Mm LTR MaLR 1 396 0 6 813 2615 141 15 21 chr15 29967623 29967803 -73527171 + Lx LINE L1 6474 6654 0 6 813 1712 161 99 106 chr15 29967803 29967830 -73527144 + MTC LTR MaLR 206 210 -211 6 813 3321 25 56 0 chr15 29967830 29968226 -73526748 + L1Md_A LINE L1 6165 6582 0 6 813 1712 161 99 106 chr15 29968226 29968432 -73526542 + MTC LTR MaLR 211 421 0 6 813 661 129 13 26 chr15 29969945 29970096 -73524878 + L1_Mus3 LINE L1 6487 6635 -3 6 813 958 136 6 6 chr15 29970623 29970793 -73524181 + (TTC)n Simple_repeat Simple_repeat 1 170 0 7 813 807 130 3 38 chr15 29970793 29971184 -73523790 + CT-rich Low_complexity Low_complexity 1 377 0 7 813 552 209 0 38 chr15 29971461 29971645 -73523329 + (TATG)n Simple_repeat Simple_repeat 2 178 0 7 813 231 248 35 60 chr15 29971877 29971993 -73522981 - Lx8 LINE L1 -1546 5927 5815 7 813 430 279 155 0 chr15 29971980 29972199 -73522775 - L1M2 LINE L1 -521 5770 5518 7 813 36821 9 0 2 chr15 29972188 29978399 -73516575 + L1Md_A LINE L1 1 5586 -297 7 813 8970 1 0 6 chr15 29978399 29979426 -73515548 + L1Md_A LINE L1 5587 6582 0 7 813 678 276 53 42 chr15 29979484 29979673 -73515301 - B3A SINE B2 -6 192 2 7 813 2066 219 24 31 chr15 29979709 29980082 -73514892 - Lx8 LINE L1 -15 5832 5466 7 813 426 20 0 0 chr15 29980082 29980133 -73514841 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 813 2066 219 24 31 chr15 29980133 29980302 -73514672 - Lx8 LINE L1 -382 5465 5295 7 813 258 32 0 0 chr15 29980376 29980407 -73514567 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 813 537 241 116 7 chr15 29980489 29980627 -73514347 + Lx5 LINE L1 6788 6940 -110 7 813 381 193 12 0 chr15 29980623 29980706 -73514268 - Lx8 LINE L1 -629 5218 5135 7 813 374 281 10 10 chr15 29980707 29980811 -73514163 + Lx9 LINE L1 5869 5972 -1672 7 813 1409 270 62 4 chr15 29980825 29981309 -73513665 + Lx9 LINE L1 6676 7187 -457 7 813 317 278 41 17 chr15 29981367 29981539 -73513435 + Lx9 LINE L1 7323 7498 -146 7 813 29 0 0 0 chr15 29981682 29981711 -73513263 + AT_rich Low_complexity Low_complexity 1 29 0 7 813 313 270 14 14 chr15 29981934 29982073 -73512901 - L1_Rod LINE L1 -581 5299 5128 7 813 933 170 6 0 chr15 29982133 29982292 -73512682 - U17 snRNA snRNA 0 207 48 7 813 1938 187 71 20 chr15 29982350 29982743 -73512231 + MTC LTR MaLR 9 421 0 7 813 1085 111 72 0 chr15 29982757 29982937 -73512037 - B2_Mm1t SINE B2 0 193 1 7 813 1417 352 81 10 chr15 29983046 29983939 -73511035 + Lx8 LINE L1 6371 7326 -147 7 813 6145 33 3 0 chr15 29984163 29984893 -73510081 + L1Md_F3 LINE L1 5850 6581 -3 7 813 207 323 98 31 chr15 29985480 29985643 -73509331 - L4 LINE RTE -203 1826 1653 7 813 480 305 69 46 chr15 29986459 29986809 -73508165 - MLT1A0 LTR MaLR -4 361 4 7 813 227 286 0 0 chr15 29987668 29987724 -73507250 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 7 813 182 136 23 0 chr15 29988191 29988235 -73506739 + (ATATG)n Simple_repeat Simple_repeat 1 45 0 7 813 214 121 62 62 chr15 29988244 29988341 -73506633 + (TA)n Simple_repeat Simple_repeat 1 97 0 7 813 391 304 142 4 chr15 29988971 29989196 -73505778 + Lx8 LINE L1 6309 6564 -909 7 813 692 327 182 51 chr15 29989209 29989880 -73505094 + RMER13A LTR ERVK 5 763 -97 7 813 719 321 71 50 chr15 29989943 29990382 -73504592 + Lx7 LINE L1 6605 7052 -644 7 813 2978 205 24 55 chr15 29990382 29990531 -73504443 + RLTR22_Mur LTR ERVK 2 151 -1697 7 813 189 0 0 0 chr15 29990531 29990552 -73504422 + (TG)n Simple_repeat Simple_repeat 2 22 0 7 813 2978 205 24 55 chr15 29990552 29990594 -73504380 + RLTR22_Mur LTR ERVK 152 175 -1673 7 813 348 127 0 0 chr15 29990594 29990649 -73504325 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 813 2978 205 24 55 chr15 29990649 29991215 -73503759 + RLTR22_Mur LTR ERVK 176 736 -1112 7 813 391 275 46 77 chr15 29991459 29991662 -73503312 + RMER12 LTR ERVK 994 1172 -150 7 813 241 222 97 0 chr15 29991665 29991737 -73503237 + RLTR22_Mur LTR ERVK 1733 1811 -37 7 813 3004 33 0 14 chr15 29991921 29992290 -73502684 + L1Md_A LINE L1 6217 6580 -2 7 813 258 32 0 0 chr15 29992311 29992342 -73502632 + (A)n Simple_repeat Simple_repeat 1 31 0 7 813 387 320 129 43 chr15 29992507 29992785 -73502189 + Lx8 LINE L1 7166 7467 -6 7 813 432 258 129 59 chr15 29993554 29993826 -73501148 + L1M5 LINE L1 4142 4432 -1714 7 813 391 291 19 50 chr15 29993989 29994148 -73500826 - RSINE1 SINE B4 -9 156 3 7 813 301 294 0 31 chr15 29994434 29994564 -73500410 + G-rich Low_complexity Low_complexity 4 129 0 7 813 21 0 0 0 chr15 29995174 29995195 -73499779 + AT_rich Low_complexity Low_complexity 1 21 0 7 813 480 93 0 0 chr15 29995404 29995479 -73499495 + (CA)n Simple_repeat Simple_repeat 1 75 0 7 813 1111 98 75 6 chr15 29995960 29996134 -73498840 + B2_Mm2 SINE B2 1 186 -9 7 813 1739 70 0 4 chr15 29996192 29996420 -73498554 + MTB_Mm LTR MaLR 1 227 -180 7 813 3579 98 0 46 chr15 29996597 29997148 -73497826 + L1Md_F2 LINE L1 6070 6582 0 7 813 5003 148 41 87 chr15 29997181 29998375 -73496599 + ETnERV2-int LTR ERVK 1053 2191 -5215 7 813 380 315 14 0 chr15 29998483 29998626 -73496348 + ETnERV2-int LTR ERVK 1432 1576 -1738 7 813 329 169 0 17 chr15 29998605 29998665 -73496309 + ETnERV2-int LTR ERVK 2194 2252 -5154 7 813 4897 182 64 55 chr15 29998659 29999976 -73494998 + ETnERV2-int LTR ERVK 2410 3738 -3668 7 813 7665 137 34 40 chr15 30000000 30001486 -73493488 + RMER16-int LTR ERVK 2700 4176 -1230 1 813 332 264 154 12 chr15 30001681 30001850 -73493124 + ETnERV2-int LTR ERVK 6233 6425 -981 2 813 302 135 0 37 chr15 30002063 30002117 -73492857 + ETnERV2-int LTR ERVK 7333 7384 -22 2 813 336 279 141 40 chr15 30002117 30002136 -73492838 + MTB LTR MaLR 162 184 -195 3 813 2073 128 39 19 chr15 30002136 30002496 -73492478 + RLTR9A LTR ERVK 1 367 -1 4 813 1356 71 2 1 chr15 30002496 30002674 -73492300 + MTB LTR MaLR 185 400 0 3 813 852 37 9 0 chr15 30003041 30003148 -73491826 - LTRIS2 LTR ERV1 0 564 457 5 813 517 56 0 0 chr15 30003147 30003219 -73491755 - LTRIS2 LTR ERV1 -239 325 254 5 813 484 267 49 88 chr15 30003225 30003451 -73491523 - RLTR1B-int LTR ERV1 -6948 608 392 6 813 749 150 63 4 chr15 30003502 30003714 -73491260 - RLTR1B-int LTR ERV1 -7271 285 1 6 813 3311 117 11 52 chr15 30003714 30004248 -73490726 - RLTR1B LTR ERV1 0 512 1 6 813 226 188 61 24 chr15 30004579 30004661 -73490313 + (TA)n Simple_repeat Simple_repeat 2 86 0 7 813 498 292 40 14 chr15 30005052 30005274 -73489700 - Lx9 LINE L1 -170 7474 7247 8 813 992 89 44 0 chr15 30005303 30005438 -73489536 - B1_Mus2 SINE Alu -5 142 2 9 813 193 29 29 29 chr15 30005689 30005724 -73489250 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 813 231 316 62 62 chr15 30006396 30006575 -73488399 + RMER20B LTR ERVK 42 220 -407 1 813 1503 0 0 0 chr15 30006753 30006920 -73488054 + (TCTCCC)n Simple_repeat Simple_repeat 3 169 0 1 813 214 246 0 55 chr15 30006941 30007014 -73487960 + CT-rich Low_complexity Low_complexity 2 70 0 1 813 527 273 23 8 chr15 30008328 30008457 -73486517 - B1F SINE Alu -18 131 1 1 813 226 250 0 0 chr15 30008889 30008937 -73486037 + (CATA)n Simple_repeat Simple_repeat 2 49 0 1 813 225 306 41 0 chr15 30008937 30009035 -73485939 - Lx9 LINE L1 -136 7508 7407 1 813 755 321 24 15 chr15 30009104 30009439 -73485535 - Lx8 LINE L1 -317 7156 6819 1 813 360 0 0 0 chr15 30009762 30009802 -73485172 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 813 493 318 131 82 chr15 30010034 30010363 -73484611 + ORR1E LTR MaLR 4 348 -11 1 813 1893 237 5 5 chr15 30011479 30011873 -73483101 - Lx6 LINE L1 -176 7284 6891 2 813 546 320 82 15 chr15 30012555 30012811 -73482163 + B4A SINE B4 14 292 0 2 813 2400 183 23 112 chr15 30012825 30012930 -73482044 + RLTR31A_Mm LTR ERVK 1 105 -479 2 813 261 0 0 0 chr15 30012930 30012959 -73482015 + (GGA)n Simple_repeat Simple_repeat 1 29 0 2 813 2400 183 23 112 chr15 30012959 30013494 -73481480 + RLTR31A_Mm LTR ERVK 106 584 0 2 813 193 256 12 12 chr15 30013529 30013612 -73481362 + GA-rich Low_complexity Low_complexity 4 86 0 2 813 1223 270 64 51 chr15 30014066 30014784 -73480190 - Lx7 LINE L1 -1789 5907 5144 2 813 929 214 302 13 chr15 30014785 30015090 -73479884 - MTD LTR MaLR -9 410 18 2 813 270 270 16 0 chr15 30015119 30015182 -73479792 - MTD LTR MaLR -315 64 1 2 813 297 51 0 0 chr15 30015251 30015290 -73479684 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 813 254 287 69 10 chr15 30015316 30015418 -73479556 + Lx7 LINE L1 5593 5700 -1996 2 101 334 305 58 11 chr15 30015478 30015768 -73479206 + L1MA4A LINE L1 5632 5902 -1571 2 814 378 0 0 0 chr15 30015793 30015835 -73479139 + (TAGA)n Simple_repeat Simple_repeat 1 42 0 3 814 599 294 18 9 chr15 30015954 30016174 -73478800 - Lx7 LINE L1 -2340 3540 3319 2 814 1573 270 82 9 chr15 30016177 30016926 -73478048 + Lx8 LINE L1 5109 5927 -1546 3 814 382 277 27 54 chr15 30016952 30017101 -73477873 + Lx8 LINE L1 6499 6643 -830 3 814 198 0 0 0 chr15 30017101 30017123 -73477851 + (T)n Simple_repeat Simple_repeat 1 22 0 3 814 37290 77 1 22 chr15 30017487 30025189 -73469785 - L1Md_T LINE L1 0 6582 99 3 814 267 336 13 6 chr15 30025228 30025384 -73469590 + Lx8 LINE L1 6988 7157 -316 3 814 1784 19 0 0 chr15 30025430 30025638 -73469336 - ORR1A0 LTR MaLR 0 346 139 3 814 219 36 0 0 chr15 30025732 30025760 -73469214 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 3 814 247 417 56 23 chr15 30025885 30026101 -73468873 - MLT1J LTR MaLR -227 285 63 3 814 225 336 108 8 chr15 30026500 30026654 -73468320 + B3A SINE B2 5 179 -37 3 814 22 35 0 0 chr15 30026670 30026699 -73468275 + AT_rich Low_complexity Low_complexity 1 29 0 3 814 228 176 0 50 chr15 30026765 30026825 -73468149 + (TTTA)n Simple_repeat Simple_repeat 4 60 0 3 814 484 311 52 0 chr15 30026846 30026981 -73467993 - RSINE1 SINE B4 -22 143 2 4 814 495 0 0 0 chr15 30027424 30027479 -73467495 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 814 21 0 0 0 chr15 30027513 30027534 -73467440 + AT_rich Low_complexity Low_complexity 1 21 0 4 814 1116 242 157 8 chr15 30028217 30028609 -73466365 - Lx9 LINE L1 -5 7639 7190 4 814 973 267 0 12 chr15 30028610 30028864 -73466110 - Lx9 LINE L1 -279 7365 7115 4 814 317 24 24 0 chr15 30030200 30030242 -73464732 + (TTG)n Simple_repeat Simple_repeat 2 44 0 4 814 1411 227 112 8 chr15 30030646 30031002 -73463972 - MTD LTR MaLR 0 419 27 4 814 2354 118 19 6 chr15 30031274 30031633 -73463341 + RMER19A LTR ERVK 1 364 -373 4 814 361 325 57 33 chr15 30031641 30031851 -73463123 + Lx8 LINE L1 7252 7466 -7 4 814 981 71 71 0 chr15 30032143 30032270 -73462704 + B1_Mus1 SINE Alu 2 137 -11 4 814 258 56 0 0 chr15 30032270 30032306 -73462668 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 5 814 7290 45 20 1 chr15 30032538 30033624 -73461350 - L1Md_F2 LINE L1 -14 6568 5453 5 814 3593 50 2 0 chr15 30033634 30034078 -73460896 - L1Md_T LINE L1 0 6582 6138 5 814 1005 271 103 17 chr15 30034078 30034427 -73460547 + MTD LTR MaLR 26 404 -15 5 814 252 341 53 8 chr15 30035104 30035237 -73459737 - MTEb LTR MaLR 0 379 241 5 814 1633 147 14 22 chr15 30035235 30035513 -73459461 - MTC LTR MaLR -104 317 42 5 814 239 372 0 26 chr15 30035620 30035736 -73459238 - MTE-int LTR MaLR -976 604 492 5 814 1281 83 0 0 chr15 30035851 30036031 -73458943 + (ATGGTG)n Simple_repeat Simple_repeat 1 180 0 5 814 360 0 0 0 chr15 30036055 30036095 -73458879 + (ATG)n Simple_repeat Simple_repeat 3 42 0 5 814 850 319 31 10 chr15 30036116 30036407 -73458567 - MTE-int LTR MaLR -1225 355 59 5 814 924 330 56 20 chr15 30036410 30036766 -73458208 - MTE2b LTR MaLR -10 369 1 5 814 21 36 0 0 chr15 30036953 30036981 -73457993 + AT_rich Low_complexity Low_complexity 1 28 0 6 814 2619 125 32 12 chr15 30037258 30037662 -73457312 - MTC LTR MaLR -4 417 6 6 814 1183 275 52 17 chr15 30038107 30038455 -73456519 - Lx5 LINE L1 -3 7047 6688 6 814 254 292 22 11 chr15 30038896 30038986 -73455988 - MLT1A0-int LTR MaLR -1643 92 2 6 814 593 248 243 0 chr15 30039005 30039227 -73455747 - MLT1A0 LTR MaLR -20 345 70 6 814 476 323 47 16 chr15 30039231 30039423 -73455551 - MTE-int LTR MaLR -1324 256 59 6 814 266 279 0 0 chr15 30039426 30039494 -73455480 - MTE2a LTR MaLR -10 369 302 6 814 24 32 0 0 chr15 30040570 30040601 -73454373 + AT_rich Low_complexity Low_complexity 1 31 0 6 814 26 0 0 0 chr15 30040944 30040970 -73454004 + AT_rich Low_complexity Low_complexity 1 26 0 6 814 1205 113 21 5 chr15 30041422 30041609 -73453365 + B2_Mm2 SINE B2 3 192 -3 6 814 230 215 123 0 chr15 30042421 30042486 -73452488 + PB1D10 SINE Alu 45 117 0 6 814 497 286 93 9 chr15 30042729 30042944 -73452030 - Lx8 LINE L1 -25 7448 7216 7 814 571 128 10 0 chr15 30043518 30043620 -73451354 - L1Md_F2 LINE L1 -13 6569 6467 7 814 1474 54 25 5 chr15 30043742 30045298 -73449676 + (GGAGAA)n Simple_repeat Simple_repeat 1 1587 0 7 814 264 119 0 0 chr15 30045298 30045340 -73449634 + (GAA)n Simple_repeat Simple_repeat 1 42 0 7 814 2000 285 91 68 chr15 30046841 30047250 -73447724 - L1Md_F2 LINE L1 0 7050 6592 7 814 534 31 0 0 chr15 30047250 30047314 -73447660 + (TTTC)n Simple_repeat Simple_repeat 2 65 0 7 814 7674 50 5 8 chr15 30047314 30049024 -73445950 - L1Md_F2 LINE L1 -459 6591 4889 7 814 394 57 0 19 chr15 30049024 30049078 -73445896 + B1_Mm SINE Alu 94 146 -1 7 814 527 291 22 0 chr15 30049092 30049271 -73445703 - Lx7 LINE L1 -1897 5799 5617 7 814 2392 85 13 0 chr15 30049273 30049591 -73445383 - ORR1A3 LTR MaLR 0 326 5 7 814 480 239 0 57 chr15 30049904 30050028 -73444946 - PB1D7 SINE Alu 0 120 4 7 814 252 0 0 0 chr15 30052124 30052152 -73442822 + (CA)n Simple_repeat Simple_repeat 2 29 0 8 814 21 0 0 0 chr15 30052191 30052212 -73442762 + AT_rich Low_complexity Low_complexity 1 21 0 8 814 17119 72 2 0 chr15 30052554 30054933 -73440041 - L1Md_F2 LINE L1 -474 5409 3027 8 814 1598 49 0 0 chr15 30054932 30055136 -73439838 + L1Md_F2 LINE L1 5383 5586 -297 8 814 8061 48 4 0 chr15 30055136 30056128 -73438846 + L1Md_F2 LINE L1 5587 6582 0 8 814 3321 121 32 27 chr15 30057026 30057553 -73437421 + Lx4A LINE L1 6527 7056 -2 8 814 307 312 0 0 chr15 30057839 30057916 -73437058 + B4 SINE B4 2 78 -214 8 814 235 328 78 23 chr15 30057932 30058060 -73436914 - Lx9 LINE L1 -974 6670 6536 8 814 1006 344 96 9 chr15 30058068 30058717 -73436257 + Lx8 LINE L1 6562 7266 -207 8 814 813 188 0 3 chr15 30058783 30059145 -73435829 + (TG)n Simple_repeat Simple_repeat 1 360 0 8 814 359 346 8 0 chr15 30059308 30059438 -73435536 + B4A SINE B4 94 224 -68 8 814 2570 74 3 0 chr15 30061788 30062114 -73432860 - ORR1A2 LTR MaLR 0 327 1 8 814 643 363 35 35 chr15 30062177 30062408 -73432566 + B4A SINE B4 50 280 -12 8 814 512 336 52 64 chr15 30063763 30064151 -73430823 + MER89 LTR ERV1 175 557 -2 9 814 766 214 89 90 chr15 30064627 30065096 -73429878 + RLTR20C LTR ERVK 1 578 0 9 814 1545 278 50 70 chr15 30065398 30066272 -73428702 - L1_Rod LINE L1 -1427 4420 3564 9 814 539 296 87 26 chr15 30066557 30066821 -73428153 + MER89-int LTR ERV1 1970 2249 -4552 9 814 793 302 25 12 chr15 30066940 30067262 -73427712 + Lx8 LINE L1 6968 7293 -180 9 814 260 231 141 0 chr15 30067422 30067500 -73427474 + MER89-int LTR ERV1 4658 4746 -2055 9 814 266 322 24 24 chr15 30067694 30067818 -73427156 + MER89-int LTR ERV1 5821 5944 -857 9 814 423 339 55 38 chr15 30068109 30068526 -73426448 + MER89-int LTR ERV1 6228 6651 -150 9 814 340 322 34 40 chr15 30068842 30068991 -73425983 + MER89 LTR ERV1 322 469 -90 9 814 798 299 59 48 chr15 30069036 30069373 -73425601 + MLT1B LTR MaLR 49 389 -1 9 814 674 300 115 62 chr15 30069481 30069819 -73425155 - MTEa LTR MaLR -21 358 3 9 814 243 88 0 0 chr15 30069827 30069861 -73425113 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 9 814 233 247 50 38 chr15 30071167 30071247 -73423727 + RMER21A LTR ERV1 606 686 -261 9 814 319 267 138 28 chr15 30071397 30071578 -73423396 + Lx8 LINE L1 7270 7470 -3 9 814 489 199 144 20 chr15 30072329 30072524 -73422450 + Lx9 LINE L1 7400 7618 -26 1 814 453 229 56 28 chr15 30073841 30073985 -73420989 - HAL1-2a_MD LINE L1 -505 2519 2372 1 814 733 214 31 103 chr15 30074145 30074369 -73420605 + B3 SINE B2 2 209 -7 1 814 3965 53 0 4 chr15 30074522 30075016 -73419958 + L1Md_F3 LINE L1 6079 6570 -14 1 814 702 179 14 43 chr15 30075214 30075354 -73419620 - B1_Mur1 SINE Alu -8 141 6 1 814 882 304 84 16 chr15 30075385 30075931 -73419043 - L1M3c LINE L1 -1853 4351 3769 1 814 322 346 12 43 chr15 30076079 30076242 -73418732 - RSINE1 SINE B4 -4 161 4 1 814 317 293 123 57 chr15 30076245 30076473 -73418501 - L1MDa LINE L1 -4786 1847 1605 1 814 274 214 97 0 chr15 30076609 30076712 -73418262 - L1M3c LINE L1 -4741 1400 1288 1 814 237 33 0 0 chr15 30076793 30076823 -73418151 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 1 814 1262 132 31 14 chr15 30076823 30077045 -73417929 - Lx4B LINE L1 -16 7042 6817 1 814 2142 83 10 0 chr15 30077050 30077339 -73417635 - L1_Mus3 LINE L1 -5 6633 6342 1 814 299 48 0 0 chr15 30077340 30077382 -73417592 + L1_Mus3 LINE L1 6247 6288 -350 1 814 405 58 0 0 chr15 30078329 30078381 -73416593 + (CAGA)n Simple_repeat Simple_repeat 2 53 0 1 814 576 111 0 0 chr15 30079220 30079310 -73415664 + (TG)n Simple_repeat Simple_repeat 1 90 0 1 814 456 328 62 0 chr15 30079312 30079440 -73415534 - RSINE1 SINE B4 -28 137 2 1 814 878 232 71 34 chr15 30079489 30079815 -73415159 - Lx7 LINE L1 -16 7680 7343 1 814 279 0 0 0 chr15 30079824 30079855 -73415119 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 814 602 291 84 89 chr15 30079959 30080317 -73414657 - MLT1A LTR MaLR 0 374 19 1 814 1130 135 16 5 chr15 30080341 30080527 -73414447 - B2_Mm2 SINE B2 -6 189 2 1 814 207 0 0 0 chr15 30080824 30080847 -73414127 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 814 402 147 0 0 chr15 30081194 30081262 -73413712 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 814 243 0 0 0 chr15 30081265 30081292 -73413682 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 814 199 349 101 23 chr15 30081631 30081760 -73413214 + MIR3 SINE MIR 67 205 -3 1 814 256 361 27 18 chr15 30082459 30082569 -73412405 + Tigger7 DNA MER2_type 13 123 -2368 1 814 307 263 53 0 chr15 30082578 30082673 -73412301 + Tigger7 DNA MER2_type 2311 2410 -81 1 814 1043 202 77 202 chr15 30082675 30083091 -73411883 + ORR1C1 LTR MaLR 1 364 -14 1 814 234 0 0 0 chr15 30083278 30083304 -73411670 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1 814 22 0 0 0 chr15 30083691 30083713 -73411261 + AT_rich Low_complexity Low_complexity 1 22 0 1 814 21 57 0 0 chr15 30083798 30083833 -73411141 + AT_rich Low_complexity Low_complexity 1 35 0 1 814 234 62 0 0 chr15 30083875 30083907 -73411067 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1 814 3224 195 2 38 chr15 30084809 30085448 -73409526 - RMER20B LTR ERVK -11 616 1 1 814 578 281 6 12 chr15 30085448 30085583 -73409391 + MER2 DNA MER2_type 182 315 -30 1 814 388 37 0 0 chr15 30085726 30085779 -73409195 - B1_Mm SINE Alu -12 135 53 1 814 392 309 104 48 chr15 30086097 30086328 -73408646 - MLT1C LTR MaLR -202 265 22 1 814 37 76 0 0 chr15 30086349 30086428 -73408546 + AT_rich Low_complexity Low_complexity 1 79 0 1 814 277 305 10 10 chr15 30086486 30086582 -73408392 + MLT2B4 LTR ERVL 328 423 -133 1 814 435 19 0 0 chr15 30086952 30087004 -73407970 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 814 2272 108 6 58 chr15 30087043 30087387 -73407587 - ORR1A3 LTR MaLR 0 326 1 1 814 5940 105 25 10 chr15 30087478 30088367 -73406607 - RLTR13D6 LTR ERVK 0 902 1 1 814 198 0 0 0 chr15 30089126 30089148 -73405826 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 1 814 667 278 220 12 chr15 30090376 30090503 -73404471 + MTE2a LTR MaLR 11 181 -198 1 814 735 52 0 0 chr15 30090503 30090599 -73404375 + (GA)n Simple_repeat Simple_repeat 1 96 0 1 814 684 226 132 11 chr15 30090599 30090775 -73404199 + MTE2a LTR MaLR 182 379 0 1 814 522 252 67 20 chr15 30091257 30091407 -73403567 - MLT1B LTR MaLR -227 163 7 1 814 189 121 0 0 chr15 30091694 30091727 -73403247 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 814 1221 87 0 0 chr15 30091727 30091898 -73403076 + (GA)n Simple_repeat Simple_repeat 1 172 0 1 814 180 382 81 0 chr15 30092376 30092499 -73402475 + L2a LINE L2 3032 3164 -262 1 814 276 312 70 18 chr15 30092810 30092924 -73402050 + MLT1B LTR MaLR 3 122 -268 1 814 282 279 35 0 chr15 30092979 30093065 -73401909 + MLT1B LTR MaLR 211 299 -91 1 814 319 356 22 0 chr15 30093358 30093493 -73401481 - L1M5 LINE L1 -3303 2843 2706 1 814 360 0 0 0 chr15 30093761 30093801 -73401173 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 814 471 60 0 0 chr15 30094940 30095007 -73399967 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 1 814 6166 246 62 25 chr15 30095612 30095944 -73399030 - Lx7 LINE L1 0 7696 7355 1 814 652 71 10 10 chr15 30095944 30096044 -73398930 + (TAGA)n Simple_repeat Simple_repeat 2 101 0 1 814 6166 246 62 25 chr15 30096044 30096206 -73398768 - Lx7 LINE L1 -342 7354 7207 1 814 603 0 0 0 chr15 30096206 30096273 -73398701 + (TTC)n Simple_repeat Simple_repeat 1 67 0 1 814 6166 236 71 21 chr15 30096273 30097981 -73396993 - Lx7 LINE L1 -490 7206 5390 1 814 597 155 8 25 chr15 30097986 30098105 -73396869 + ORR1D2 LTR MaLR 238 354 -16 1 814 421 211 40 0 chr15 30098481 30098616 -73396358 + ORR1D2 LTR MaLR 1 144 -230 1 814 198 259 9 0 chr15 30098739 30098791 -73396183 + L2b LINE L2 3334 3387 0 1 814 830 189 6 0 chr15 30098926 30099101 -73395873 + CT-rich Low_complexity Low_complexity 2 177 0 1 814 518 311 31 10 chr15 30099247 30099439 -73395535 - B3A SINE B2 0 198 3 1 814 649 303 114 37 chr15 30100446 30100717 -73394257 + B4A SINE B4 1 292 0 1 814 202 276 0 26 chr15 30100731 30100809 -73394165 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 814 360 0 0 0 chr15 30100836 30100876 -73394098 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 814 207 88 0 0 chr15 30100940 30100974 -73394000 + (A)n Simple_repeat Simple_repeat 1 34 0 1 814 207 0 0 0 chr15 30102419 30102442 -73392532 + (CGG)n Simple_repeat Simple_repeat 1 23 0 1 814 27 92 0 0 chr15 30102487 30102563 -73392411 + GC_rich Low_complexity Low_complexity 1 76 0 1 814 756 0 0 0 chr15 30104802 30104886 -73390088 + (TTTCC)n Simple_repeat Simple_repeat 4 87 0 1 814 270 0 0 0 chr15 30105128 30105158 -73389816 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 814 180 77 0 0 chr15 30106543 30106569 -73388405 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 814 552 200 0 0 chr15 30106568 30106683 -73388291 + (TA)n Simple_repeat Simple_repeat 2 116 0 1 814 225 0 0 0 chr15 30106685 30106710 -73388264 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 814 210 191 0 0 chr15 30106838 30106885 -73388089 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 1 814 460 279 19 0 chr15 30108875 30108979 -73385995 - LTR79 LTR ERVL -421 106 1 1 814 2135 76 26 73 chr15 30110201 30110541 -73384433 - ORR1A2 LTR MaLR -3 324 1 1 814 234 0 0 0 chr15 30111006 30111032 -73383942 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 814 345 312 0 35 chr15 30111627 30111740 -73383234 + RMER12 LTR ERVK 743 851 -471 1 814 306 125 0 0 chr15 30111746 30111794 -73383180 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 814 2123 114 76 36 chr15 30112527 30112883 -73382091 + Lx3_Mus LINE L1 6640 7009 0 1 814 22 0 0 0 chr15 30112889 30112911 -73382063 + AT_rich Low_complexity Low_complexity 1 22 0 1 814 314 264 200 40 chr15 30114491 30114641 -73380333 - RMER15 LTR ERVL -102 473 300 1 814 514 287 50 22 chr15 30117263 30117402 -73377572 - B1F SINE Alu 0 149 7 1 814 313 198 12 12 chr15 30117905 30117987 -73376987 + CT-rich Low_complexity Low_complexity 3 84 0 1 814 596 299 64 12 chr15 30118007 30118164 -73376810 - Lx6 LINE L1 -49 7411 7256 1 814 218 56 0 27 chr15 30118164 30118201 -73376773 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 814 596 306 68 16 chr15 30118201 30118257 -73376717 - Lx6 LINE L1 -205 7255 7211 1 814 1383 81 0 51 chr15 30118341 30118536 -73376438 + B2_Mm2 SINE B2 1 185 -10 1 814 304 380 55 26 chr15 30118721 30118994 -73375980 + MER2 DNA MER2_type 6 286 -59 1 814 455 320 184 0 chr15 30119131 30119468 -73375506 + L1MC3 LINE L1 7301 7699 -86 1 814 562 244 88 92 chr15 30121407 30121624 -73373350 - B3 SINE B2 0 216 1 1 814 302 267 11 11 chr15 30123608 30123699 -73371275 - LTR33A_ LTR ERVL -31 500 410 1 814 40 59 0 0 chr15 30124488 30124556 -73370418 + AT_rich Low_complexity Low_complexity 1 68 0 1 814 1162 240 25 39 chr15 30124915 30125197 -73369777 - Lx6 LINE L1 -26 7434 7157 1 814 558 0 0 0 chr15 30125213 30125275 -73369699 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 1 814 180 0 0 0 chr15 30126020 30126040 -73368934 + (A)n Simple_repeat Simple_repeat 1 20 0 1 814 831 255 39 14 chr15 30126730 30126751 -73368223 - B3 SINE B2 -4 212 193 1 814 374 38 0 19 chr15 30126751 30126804 -73368170 + (TATG)n Simple_repeat Simple_repeat 1 52 0 1 814 831 255 39 14 chr15 30126804 30126989 -73367985 - B3 SINE B2 -24 192 1 1 814 360 298 90 15 chr15 30126989 30127121 -73367853 - MER44B DNA MER2_type -338 212 71 1 814 858 236 55 10 chr15 30127127 30127328 -73367646 - B3 SINE B2 -6 210 1 1 814 744 249 275 9 chr15 30127417 30127636 -73367338 - RMER17C LTR ERVK 0 410 112 1 814 765 61 0 0 chr15 30127636 30127735 -73367239 + (GA)n Simple_repeat Simple_repeat 1 99 0 1 814 744 249 275 9 chr15 30127735 30127839 -73367135 - RMER17C LTR ERVK -299 111 2 1 814 423 0 0 0 chr15 30128516 30128563 -73366411 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 814 379 220 9 57 chr15 30129023 30129129 -73365845 - RLTR31A_Mm LTR ERVK -158 426 326 1 814 360 111 0 0 chr15 30129251 30129314 -73365660 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 814 243 0 0 0 chr15 30129314 30129341 -73365633 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 814 261 0 0 0 chr15 30129341 30129370 -73365604 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1 814 528 235 52 22 chr15 30129392 30129527 -73365447 - Lx8 LINE L1 -148 7325 7187 1 814 426 336 14 7 chr15 30130061 30130199 -73364775 - MER20 DNA MER1_type -59 160 22 2 814 1688 168 117 22 chr15 30130384 30130438 -73364536 - ORR1B1 LTR MaLR 0 394 341 2 814 185 0 40 0 chr15 30130438 30130463 -73364511 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2 814 3527 91 14 22 chr15 30130467 30130959 -73364015 - Lx3_Mus LINE L1 -8 7001 6514 2 814 1688 168 117 22 chr15 30130959 30131259 -73363715 - ORR1B1 LTR MaLR -54 340 1 2 814 206 354 0 29 chr15 30132405 30132507 -73362467 - MIRb SINE MIR 0 268 170 2 814 316 329 49 59 chr15 30132721 30133025 -73361949 - MLT1D LTR MaLR -22 483 183 2 814 188 34 0 33 chr15 30133322 30133352 -73361622 + (TTTTTG)n Simple_repeat Simple_repeat 4 32 0 2 814 21 0 0 0 chr15 30134749 30134770 -73360204 + AT_rich Low_complexity Low_complexity 1 21 0 2 814 230 291 103 45 chr15 30136272 30136495 -73358479 - L2a LINE L2 -246 3180 2945 2 814 333 186 215 93 chr15 30140303 30140410 -73354564 + PB1D9 SINE Alu 1 120 0 2 814 203 184 26 0 chr15 30140801 30140839 -73354135 + CT-rich Low_complexity Low_complexity 5 43 0 2 814 523 323 12 12 chr15 30141756 30141919 -73353055 + RSINE1 SINE B4 1 163 -2 2 814 377 287 11 0 chr15 30142093 30142187 -73352787 + PB1D10 SINE Alu 18 112 -5 2 814 649 268 213 10 chr15 30145101 30145288 -73349686 + ID_B1 SINE B4 6 217 -7 2 814 927 279 76 24 chr15 30146004 30146345 -73348629 - ORR1E LTR MaLR 0 359 1 2 814 423 0 0 0 chr15 30146485 30146532 -73348442 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 101 23 0 0 0 chr15 30146542 30146565 -73348409 + AT_rich Low_complexity Low_complexity 1 23 0 2 815 38852 30 0 0 chr15 30146572 30152778 -73342196 - L1Md_T LINE L1 0 6585 282 2 815 230 352 48 8 chr15 30152778 30152904 -73342070 - MLT2C2 LTR ERVL -48 511 381 2 815 21 0 0 0 chr15 30153047 30153068 -73341906 + AT_rich Low_complexity Low_complexity 1 21 0 2 815 641 82 10 0 chr15 30153191 30153288 -73341686 + (CCTA)n Simple_repeat Simple_repeat 1 98 0 2 815 747 154 26 2 chr15 30153786 30153940 -73341034 - L1_Mm LINE L1 -814 5063 4907 2 815 8170 44 2 1 chr15 30153936 30155211 -73339763 - L1Md_F2 LINE L1 -1 6581 5306 2 815 2401 98 0 0 chr15 30155212 30155538 -73339436 - L1_Mm LINE L1 -957 4926 4601 2 815 3986 83 110 19 chr15 30155539 30156104 -73338870 + L1_Mus2 LINE L1 5951 6566 0 2 815 21 0 0 0 chr15 30156703 30156724 -73338250 + AT_rich Low_complexity Low_complexity 1 21 0 2 815 537 55 0 0 chr15 30158347 30158420 -73336554 + (TG)n Simple_repeat Simple_repeat 1 73 0 2 815 279 0 0 0 chr15 30158420 30158450 -73336524 + (GA)n Simple_repeat Simple_repeat 1 31 0 2 815 246 206 51 64 chr15 30159179 30159257 -73335717 - MLT1C LTR MaLR -369 98 22 2 815 3717 99 14 22 chr15 30159708 30160212 -73334762 - Lx LINE L1 -15 6639 6140 2 815 1073 246 9 5 chr15 30160256 30160468 -73334506 + B3 SINE B2 3 215 -1 2 815 22 0 0 0 chr15 30160542 30160564 -73334410 + AT_rich Low_complexity Low_complexity 1 22 0 2 815 463 194 145 0 chr15 30161624 30161748 -73333226 - MTE2b LTR MaLR -37 342 201 2 815 432 130 0 0 chr15 30161748 30161817 -73333157 + (AGGGGG)n Simple_repeat Simple_repeat 6 74 0 2 815 484 301 95 20 chr15 30161817 30162017 -73332957 - MTE2b LTR MaLR -164 215 1 2 815 272 274 22 45 chr15 30162640 30162774 -73332200 - MER33 DNA MER1_type 0 324 194 2 815 229 282 59 0 chr15 30162829 30162914 -73332060 - MER33 DNA MER1_type -225 99 10 2 815 245 267 182 15 chr15 30163094 30163231 -73331743 - MER5A1 DNA MER1_type -3 163 4 2 815 824 226 119 163 chr15 30164583 30164926 -73330048 + MTE2b LTR MaLR 50 377 -2 2 815 273 296 0 92 chr15 30165245 30165364 -73329610 - RMER1C Other Other -12 1330 1223 2 815 26 30 0 0 chr15 30165789 30165822 -73329152 + AT_rich Low_complexity Low_complexity 1 33 0 2 815 241 305 0 0 chr15 30166071 30166130 -73328844 + CT-rich Low_complexity Low_complexity 1 59 0 2 815 1559 283 63 24 chr15 30166565 30167118 -73327856 + Lx8 LINE L1 6898 7472 -1 2 815 251 114 23 0 chr15 30167144 30167188 -73327786 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 815 396 40 0 0 chr15 30169185 30169235 -73325739 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 815 279 0 0 0 chr15 30169409 30169440 -73325534 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 2 815 245 159 14 0 chr15 30169440 30169509 -73325465 - Lx6 LINE L1 -44 7416 7347 2 815 277 299 73 22 chr15 30170082 30170260 -73324714 + L1MD LINE L1 2827 3013 -3133 2 815 612 312 86 41 chr15 30170744 30171544 -73323430 + L1MD LINE L1 3266 4101 -2045 2 815 231 264 90 9 chr15 30172060 30172171 -73322803 + L1MD LINE L1 4712 4831 -1315 2 815 399 266 64 0 chr15 30172578 30172672 -73322302 + PB1D10 SINE Alu 10 109 -8 2 815 222 150 0 0 chr15 30172682 30172722 -73322252 + (ATG)n Simple_repeat Simple_repeat 3 42 0 2 815 372 287 224 8 chr15 30172923 30173186 -73321788 + RMER15 LTR ERVL 256 575 0 2 815 382 327 45 66 chr15 30173203 30173445 -73321529 + L1MD LINE L1 5378 5614 -628 2 815 364 278 315 28 chr15 30173469 30173650 -73321324 + MTD LTR MaLR 142 374 -45 2 815 270 329 49 69 chr15 30173665 30173969 -73321005 - L1ME1 LINE L1 -199 5980 5683 2 815 267 303 91 9 chr15 30174132 30174242 -73320732 - B1F SINE Alu 0 149 31 2 815 273 299 32 25 chr15 30174598 30174756 -73320218 - L1M3 LINE L1 -633 5547 5389 2 815 234 297 40 13 chr15 30176638 30176713 -73318261 - MER47B DNA MER2_type -172 246 170 2 815 319 335 39 29 chr15 30176858 30177064 -73317910 - L1MEc LINE L1 -4166 2234 2027 2 815 23 33 0 0 chr15 30177071 30177101 -73317873 + AT_rich Low_complexity Low_complexity 1 30 0 2 815 23 54 0 0 chr15 30177537 30177574 -73317400 + AT_rich Low_complexity Low_complexity 1 37 0 2 815 5202 137 30 7 chr15 30177580 30178426 -73316548 - Lx4A LINE L1 -1 7057 6193 2 815 300 0 143 0 chr15 30178426 30178468 -73316506 + L1_Mur2 LINE L1 4463 4510 -1367 2 815 546 16 0 0 chr15 30178540 30178603 -73316371 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 815 385 207 123 8 chr15 30178730 30178852 -73316122 - Lx6 LINE L1 -17 7443 7308 2 815 716 278 0 6 chr15 30179227 30179408 -73315566 + B3A SINE B2 1 180 -18 2 815 257 327 88 117 chr15 30179473 30179722 -73315252 - MLT1E LTR MaLR -99 554 313 2 815 765 328 10 5 chr15 30180054 30180250 -73314724 + ID_B1 SINE B4 2 198 -26 2 815 974 153 0 22 chr15 30180274 30180508 -73314466 + GA-rich Low_complexity Low_complexity 1 228 0 2 815 258 219 67 27 chr15 30180545 30180620 -73314354 + PB1D10 SINE Alu 24 101 -16 2 815 33893 43 0 3 chr15 30181233 30186491 -73308483 + L1Md_T LINE L1 253 5589 -297 2 815 8396 36 0 0 chr15 30186491 30187487 -73307487 + L1Md_T LINE L1 5590 6585 0 2 815 29 0 0 0 chr15 30187487 30187516 -73307458 + AT_rich Low_complexity Low_complexity 1 29 0 2 815 3283 31 13 0 chr15 30188550 30188941 -73306033 - MTA_Mm LTR MaLR 0 396 1 2 815 556 239 32 74 chr15 30189989 30190179 -73304795 + B3A SINE B2 1 182 -16 2 815 217 231 19 0 chr15 30190483 30190535 -73304439 + C-rich Low_complexity Low_complexity 4 56 0 2 815 348 315 23 0 chr15 30191560 30191690 -73303284 + CT-rich Low_complexity Low_complexity 2 134 0 2 815 3125 70 7 18 chr15 30193118 30193556 -73301418 - L1_Mus3 LINE L1 -2 6636 6204 2 815 743 205 19 15 chr15 30194304 30194468 -73300506 + B3 SINE B2 1 152 -43 2 815 222 118 0 0 chr15 30194468 30194502 -73300472 + (CATA)n Simple_repeat Simple_repeat 1 34 0 2 815 496 247 9 108 chr15 30194502 30194550 -73300424 + B2_Mm2 SINE B2 153 192 -3 2 815 327 65 0 0 chr15 30195131 30195177 -73299797 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 815 315 0 0 0 chr15 30195567 30195602 -73299372 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 815 267 292 40 40 chr15 30196017 30196117 -73298857 + L2a LINE L2 3252 3351 -75 2 815 657 0 0 0 chr15 30196498 30196571 -73298403 + (GGAA)n Simple_repeat Simple_repeat 3 75 0 2 815 567 265 30 0 chr15 30198037 30198169 -73296805 + ID_B1 SINE B4 84 219 -5 2 815 621 110 0 0 chr15 30198950 30199050 -73295924 + (TG)n Simple_repeat Simple_repeat 1 100 0 2 815 540 340 6 12 chr15 30199978 30200320 -73294654 - L1M2 LINE L1 -855 5288 4949 2 815 783 295 0 19 chr15 30200482 30200696 -73294278 + B3 SINE B2 2 211 -5 2 815 186 133 0 0 chr15 30200746 30200776 -73294198 + (A)n Simple_repeat Simple_repeat 1 30 0 2 815 224 229 98 0 chr15 30201164 30201225 -73293749 + L2c LINE L2 3247 3313 -74 2 815 2523 167 29 68 chr15 30201781 30202365 -73292609 + RLTR31_Mm LTR ERVK 1 561 0 2 815 380 71 18 0 chr15 30203332 30203388 -73291586 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 815 237 33 0 0 chr15 30203478 30203508 -73291466 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 815 37 0 0 0 chr15 30203654 30203691 -73291283 + AT_rich Low_complexity Low_complexity 1 37 0 2 815 854 243 41 0 chr15 30203961 30204179 -73290795 - Lx6 LINE L1 -7 7453 7227 2 815 4199 204 86 24 chr15 30204180 30204269 -73290705 - Lx6 LINE L1 -430 7030 6889 2 815 432 0 0 0 chr15 30204269 30204317 -73290657 + (TC)n Simple_repeat Simple_repeat 2 49 0 2 815 318 50 0 0 chr15 30204317 30204356 -73290618 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 815 4199 204 86 24 chr15 30204356 30205315 -73289659 - Lx6 LINE L1 -572 6888 5917 2 815 3223 53 5 0 chr15 30207784 30208178 -73286796 + MTA_Mm LTR MaLR 1 396 0 2 815 261 0 0 0 chr15 30208510 30208539 -73286435 + (TC)n Simple_repeat Simple_repeat 2 30 0 2 815 405 0 0 0 chr15 30209401 30209446 -73285528 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 815 1504 120 0 4 chr15 30209640 30209874 -73285100 - Lx LINE L1 -15 6639 6407 2 815 497 273 146 11 chr15 30210382 30210567 -73284407 + B3 SINE B2 1 210 -6 2 815 690 261 74 20 chr15 30211841 30212044 -73282930 + B3 SINE B2 2 215 -1 2 815 302 165 132 0 chr15 30212096 30212187 -73282787 + Tigger7 DNA MER2_type 2271 2373 -118 2 815 28 48 0 0 chr15 30212197 30212239 -73282735 + AT_rich Low_complexity Low_complexity 1 42 0 2 815 265 157 26 61 chr15 30212239 30212354 -73282620 + (TTATA)n Simple_repeat Simple_repeat 5 115 0 2 815 304 276 58 41 chr15 30212377 30212498 -73282476 + Tigger7 DNA MER2_type 2360 2482 -9 2 815 316 292 53 9 chr15 30213868 30213982 -73280992 - MLT1C LTR MaLR -44 423 305 3 815 425 285 30 23 chr15 30214081 30214214 -73280760 - MLT1C LTR MaLR -304 163 30 3 815 264 318 98 13 chr15 30216384 30216537 -73278437 - MLT1C LTR MaLR -256 211 46 3 815 290 87 22 0 chr15 30217348 30217394 -73277580 + (TTCC)n Simple_repeat Simple_repeat 3 49 0 3 815 24 32 0 0 chr15 30217394 30217425 -73277549 + AT_rich Low_complexity Low_complexity 1 31 0 3 815 1156 21 0 0 chr15 30217427 30217568 -73277406 - B1_Mm SINE Alu 0 147 7 3 815 1649 72 27 0 chr15 30217576 30217797 -73277177 - L1_Mus1 LINE L1 0 6567 6341 3 815 735 154 47 41 chr15 30217797 30217814 -73277160 - ID SINE ID -146 78 56 3 815 1163 35 0 0 chr15 30217814 30217957 -73277017 + L1Md_F2 LINE L1 5713 5855 -727 3 815 202 194 16 16 chr15 30219908 30219971 -73275003 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 3 815 985 305 9 38 chr15 30221157 30221498 -73273476 - MTE2b LTR MaLR -4 375 45 3 815 312 27 0 0 chr15 30221747 30221784 -73273190 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 815 217 155 17 17 chr15 30222341 30222400 -73272574 + GA-rich Low_complexity Low_complexity 2 60 0 3 815 627 335 45 7 chr15 30222521 30222810 -73272164 + Lx8 LINE L1 6343 6642 -831 3 815 503 232 9 0 chr15 30222924 30223036 -73271938 - MTD LTR MaLR -16 403 291 3 815 1175 252 115 3 chr15 30223030 30223325 -73271649 + MTD LTR MaLR 55 382 -37 3 815 909 207 238 0 chr15 30224101 30224420 -73270554 - Lx9 LINE L1 -48 7596 7202 3 815 1056 215 65 27 chr15 30224432 30224861 -73270113 - RMER4B LTR ERVK -9 457 16 3 815 711 224 23 6 chr15 30224862 30225033 -73269941 - Lx9 LINE L1 -429 7215 7042 3 815 198 71 0 0 chr15 30225033 30225061 -73269913 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 3 815 257 288 0 27 chr15 30225075 30225150 -73269824 + C-rich Low_complexity Low_complexity 4 76 0 3 815 319 305 94 9 chr15 30226495 30226601 -73268373 - ID_B1 SINE B4 -25 199 85 3 815 23 0 0 0 chr15 30227119 30227142 -73267832 + AT_rich Low_complexity Low_complexity 1 23 0 3 815 318 80 0 0 chr15 30227472 30227522 -73267452 + (T)n Simple_repeat Simple_repeat 1 50 0 3 815 1103 89 0 23 chr15 30227626 30227798 -73267176 - L1Md_F2 LINE L1 -2 6580 6413 3 815 510 263 19 6 chr15 30228381 30228538 -73266436 - L1MC3 LINE L1 -286 7499 7341 3 815 603 164 19 19 chr15 30231764 30231919 -73263055 - Lx9 LINE L1 -12 7632 7478 3 815 557 250 24 60 chr15 30232200 30232366 -73262608 - RSINE1 SINE B4 -2 163 4 3 815 454 228 11 0 chr15 30232750 30232842 -73262132 - B3 SINE B2 -67 149 57 3 815 306 0 0 0 chr15 30233005 30233039 -73261935 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 3 815 360 0 0 0 chr15 30233166 30233206 -73261768 + (T)n Simple_repeat Simple_repeat 1 40 0 3 815 369 197 0 0 chr15 30233721 30233797 -73261177 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 815 22 0 0 0 chr15 30234713 30234735 -73260239 + AT_rich Low_complexity Low_complexity 1 22 0 3 815 198 0 0 0 chr15 30236039 30236061 -73258913 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 815 459 150 45 52 chr15 30236072 30236227 -73258747 + Lx9 LINE L1 7484 7637 -7 3 815 270 281 125 44 chr15 30236764 30236924 -73258050 - MLT1A LTR MaLR -183 191 19 3 815 684 165 17 12 chr15 30237302 30237474 -73257500 + GA-rich Low_complexity Low_complexity 2 174 0 3 815 192 182 0 0 chr15 30237925 30237969 -73257005 + A-rich Low_complexity Low_complexity 1 44 0 3 815 461 360 31 31 chr15 30238159 30238337 -73256637 - MLT1D LTR MaLR -4 501 323 3 815 238 67 44 0 chr15 30238337 30238382 -73256592 + (TTG)n Simple_repeat Simple_repeat 3 49 0 3 815 461 360 31 31 chr15 30238382 30238432 -73256542 - MLT1D LTR MaLR -183 322 273 3 815 1294 251 76 6 chr15 30238792 30239121 -73255853 - MTD LTR MaLR -50 369 18 3 815 543 333 34 15 chr15 30239158 30239336 -73255638 + B3A SINE B2 24 205 -11 3 815 447 19 0 0 chr15 30239691 30239743 -73255231 + (TTA)n Simple_repeat Simple_repeat 3 54 0 3 815 1326 78 0 0 chr15 30240102 30240282 -73254692 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 815 189 320 0 0 chr15 30240428 30240478 -73254496 + MIR SINE MIR 83 132 -130 3 815 245 297 106 29 chr15 30240727 30240831 -73254143 + PB1D10 SINE Alu 1 112 -5 3 815 219 218 0 0 chr15 30241970 30242025 -73252949 + (CAGA)n Simple_repeat Simple_repeat 4 58 0 3 815 402 301 80 11 chr15 30242175 30242350 -73252624 - Tigger13a DNA MER2_type -256 515 329 3 815 746 221 129 21 chr15 30243126 30243320 -73251654 + B3 SINE B2 1 215 -1 3 815 239 257 118 45 chr15 30243425 30243535 -73251439 + L1MA7 LINE L1 5976 6093 -198 3 815 719 301 6 0 chr15 30243793 30243956 -73251018 - ID_B1 SINE B4 -20 204 41 3 815 26 50 0 0 chr15 30244971 30245011 -73249963 + AT_rich Low_complexity Low_complexity 1 40 0 3 815 237 83 0 0 chr15 30245092 30245128 -73249846 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 815 221 303 15 15 chr15 30245368 30245435 -73249539 + ID2 SINE ID 8 74 -9 3 815 605 313 46 100 chr15 30245386 30245666 -73249308 + B4 SINE B4 28 292 0 3 815 1371 102 5 10 chr15 30246290 30246499 -73248475 + Lx LINE L1 6444 6651 -3 3 815 21 0 0 0 chr15 30247184 30247205 -73247769 + AT_rich Low_complexity Low_complexity 1 21 0 3 815 424 214 15 45 chr15 30247667 30247799 -73247175 + Lx9 LINE L1 7375 7502 -142 3 815 34 24 0 0 chr15 30247895 30247936 -73247038 + AT_rich Low_complexity Low_complexity 1 41 0 3 815 503 329 120 0 chr15 30247995 30248229 -73246745 - MLT1F1 LTR MaLR -307 262 1 3 815 1174 121 9 56 chr15 30248296 30248569 -73246405 - ORR1A2 LTR MaLR 0 384 1 3 815 528 357 115 49 chr15 30249012 30249463 -73245511 + MER21B LTR ERV1 21 501 -362 3 815 246 32 0 0 chr15 30250109 30250140 -73244834 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 815 287 349 11 21 chr15 30251474 30251619 -73243355 - L2c LINE L2 -42 3345 3215 3 815 338 246 193 126 chr15 30252610 30252745 -73242229 + RSINE1 SINE B4 22 165 0 3 815 626 249 0 3 chr15 30252745 30253093 -73241881 + (CA)n Simple_repeat Simple_repeat 1 346 0 3 815 342 257 0 0 chr15 30253114 30253219 -73241755 + (CA)n Simple_repeat Simple_repeat 1 105 0 3 815 402 302 57 14 chr15 30253485 30253626 -73241348 - RSINE1 SINE B4 -17 148 2 3 815 188 242 69 83 chr15 30255576 30255648 -73239326 - L2a LINE L2 -3 3423 3353 3 815 213 189 0 0 chr15 30257633 30257670 -73237304 + CT-rich Low_complexity Low_complexity 4 40 0 3 815 7323 58 4 9 chr15 30258069 30259090 -73235884 - L1_Mus2 LINE L1 0 6566 5536 3 815 888 217 36 31 chr15 30259291 30259515 -73235459 + URR1A DNA MER1_type 1 225 -1 3 815 301 290 0 0 chr15 30260616 30260678 -73234296 + ID4_ SINE ID 19 80 -3 3 815 195 129 0 0 chr15 30260678 30260709 -73234265 + (CATA)n Simple_repeat Simple_repeat 2 32 0 3 815 292 141 15 30 chr15 30260709 30260775 -73234199 + (CAT)n Simple_repeat Simple_repeat 1 65 0 3 815 717 332 30 26 chr15 30260775 30261041 -73233933 - MLT1A0 LTR MaLR -67 298 32 3 815 234 275 30 53 chr15 30263236 30263480 -73231494 + (CACTC)n Simple_repeat Simple_repeat 1 238 0 3 815 593 274 50 20 chr15 30264769 30264970 -73230004 - ID_B1 SINE B4 -15 209 3 3 815 855 246 35 20 chr15 30265434 30265633 -73229341 + B3 SINE B2 2 203 -13 3 815 279 0 0 0 chr15 30268180 30268211 -73226763 + (T)n Simple_repeat Simple_repeat 1 31 0 3 815 252 374 43 54 chr15 30268778 30269058 -73225916 + L4 LINE RTE 618 894 -1135 3 815 906 257 23 0 chr15 30269893 30270150 -73224824 - RMER15 LTR ERVL -12 563 301 3 815 500 0 0 0 chr15 30270315 30270375 -73224599 + ORR1A0 LTR MaLR 1 60 -286 3 815 454 231 16 41 chr15 30270377 30270499 -73224475 - PB1D9 SINE Alu -1 119 1 3 815 845 274 139 15 chr15 30270544 30270881 -73224093 + MTEa LTR MaLR 1 379 0 3 815 965 162 19 0 chr15 30271247 30271407 -73223567 + B2_Mm2 SINE B2 1 163 -32 3 815 267 317 42 0 chr15 30273122 30273221 -73221753 + PB1D7 SINE Alu 15 117 -3 3 815 419 265 96 0 chr15 30273621 30273757 -73221217 - B1_Mur2 SINE Alu 0 149 1 3 815 459 261 41 142 chr15 30273758 30273977 -73220997 - B3A SINE B2 0 198 2 3 815 27 49 0 0 chr15 30274204 30274245 -73220729 + AT_rich Low_complexity Low_complexity 1 41 0 3 815 202 250 0 91 chr15 30275042 30275108 -73219866 + MIRm SINE MIR 107 166 -110 3 815 1666 237 116 41 chr15 30275957 30276464 -73218510 - RMER15 LTR ERVL -2 573 29 3 816 187 54 54 0 chr15 30278578 30278615 -73216359 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 3 816 21294 22 1 0 chr15 30278617 30281904 -73213070 - L1Md_T LINE L1 0 6582 3291 3 816 2048 136 11 85 chr15 30281904 30282282 -73212692 - ORR1B1 LTR MaLR -4 390 41 3 816 483 63 0 0 chr15 30282570 30282633 -73212341 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 816 406 314 121 62 chr15 30282765 30283088 -73211886 - MLT1E2 LTR MaLR -40 640 290 3 816 4080 109 48 14 chr15 30283547 30284188 -73210786 - Lx LINE L1 -2 6652 5990 3 816 468 259 73 25 chr15 30285654 30285813 -73209161 + MTE2b LTR MaLR 202 370 0 3 816 2652 48 232 0 chr15 30286333 30286687 -73208287 - RLTR10C LTR ERVK 0 436 1 3 816 573 329 0 0 chr15 30286763 30286906 -73208068 + ID_B1 SINE B4 82 224 0 3 816 232 367 0 12 chr15 30286939 30287019 -73207955 + Charlie8 DNA MER1_type 187 265 -2163 3 816 217 128 43 0 chr15 30287122 30287169 -73207805 + CT-rich Low_complexity Low_complexity 3 51 0 3 816 278 194 15 0 chr15 30287187 30287254 -73207720 + CT-rich Low_complexity Low_complexity 4 71 0 3 816 249 232 99 59 chr15 30287285 30287386 -73207588 - Lx9 LINE L1 -197 7447 7343 4 816 486 0 0 0 chr15 30287386 30287440 -73207534 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 816 752 269 21 13 chr15 30287445 30287682 -73207292 - Lx9 LINE L1 -291 7353 7115 4 816 243 200 0 20 chr15 30288456 30288507 -73206467 + (TATG)n Simple_repeat Simple_repeat 4 53 0 4 816 290 323 139 42 chr15 30288512 30288802 -73206172 - B4A SINE B4 0 292 15 4 816 286 370 96 0 chr15 30288979 30289114 -73205860 - B1F1 SINE Alu 0 149 2 4 816 236 0 21 64 chr15 30290807 30290854 -73204120 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 4 816 460 277 127 0 chr15 30292993 30293159 -73201815 + Cheshire DNA MER1_type 31 217 -2203 4 816 2767 84 3 8 chr15 30293309 30293691 -73201283 + MTA_Mm LTR MaLR 1 380 -16 4 816 242 125 0 35 chr15 30293699 30293757 -73201217 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 4 816 512 248 0 0 chr15 30293909 30294018 -73200956 + B1_Mur3 SINE Alu 34 142 -7 4 816 781 351 19 12 chr15 30294900 30295223 -73199751 - Tigger7 DNA MER2_type -2145 346 22 4 816 241 250 53 0 chr15 30295530 30295606 -73199368 - MER82 DNA MER2_type -360 293 214 4 816 634 72 0 20 chr15 30296615 30296714 -73198260 + (CA)n Simple_repeat Simple_repeat 2 98 0 4 816 23 0 0 0 chr15 30296780 30296803 -73198171 + AT_rich Low_complexity Low_complexity 1 23 0 4 816 1580 258 18 13 chr15 30296972 30297365 -73197609 + MTD LTR MaLR 4 398 -21 4 816 306 0 0 0 chr15 30298347 30298381 -73196593 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 4 816 48 0 0 0 chr15 30299280 30299328 -73195646 + AT_rich Low_complexity Low_complexity 1 48 0 4 816 272 67 22 0 chr15 30299333 30299378 -73195596 - Lx9 LINE L1 -7 7637 7592 4 816 756 171 35 137 chr15 30299456 30299740 -73195234 + Lx9 LINE L1 7389 7643 -1 4 816 181 354 0 24 chr15 30300114 30300198 -73194776 + MIRb SINE MIR 125 206 -62 4 816 825 188 0 0 chr15 30300380 30300669 -73194305 + (TG)n Simple_repeat Simple_repeat 1 289 0 4 816 189 229 0 0 chr15 30301237 30301285 -73193689 + GA-rich Low_complexity Low_complexity 1 48 0 4 816 299 174 40 7 chr15 30301407 30301557 -73193417 + (TA)n Simple_repeat Simple_repeat 2 156 0 4 816 212 0 36 0 chr15 30302262 30302290 -73192684 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 816 1179 62 7 0 chr15 30302291 30302436 -73192538 - B1_Mus2 SINE Alu 0 147 2 4 816 295 305 474 1 chr15 30302613 30302836 -73192138 - MTEa LTR MaLR -38 341 24 4 816 2177 98 6 52 chr15 30303067 30303410 -73191564 + ORR1A2 LTR MaLR 1 327 0 4 816 351 0 0 0 chr15 30303986 30304025 -73190949 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 816 399 323 15 52 chr15 30304025 30304159 -73190815 - B4A SINE B4 -23 269 141 4 816 230 182 0 35 chr15 30304580 30304637 -73190337 + GA-rich Low_complexity Low_complexity 3 57 0 4 816 719 291 97 11 chr15 30304820 30305088 -73189886 - B4 SINE B4 0 292 2 4 816 23 33 0 0 chr15 30305911 30305941 -73189033 + AT_rich Low_complexity Low_complexity 1 30 0 4 816 1754 200 103 2 chr15 30305960 30306397 -73188577 + Lx2B LINE L1 6520 7000 0 4 816 840 276 5 5 chr15 30306774 30306960 -73188014 - B3 SINE B2 -30 186 1 4 816 269 352 16 18 chr15 30308055 30308193 -73186781 - PB1D10 SINE Alu -9 140 1 4 816 2487 168 38 47 chr15 30309209 30309739 -73185235 - RMER1B Other Other 0 1066 542 4 816 2329 161 57 19 chr15 30309886 30310305 -73184669 - RMER19A LTR ERVK -300 437 3 4 816 379 264 26 121 chr15 30311799 30311989 -73182985 + RLTR23 LTR ERV1 257 428 -2 4 816 498 148 0 0 chr15 30313957 30314058 -73180916 + (CAGA)n Simple_repeat Simple_repeat 4 104 0 4 816 558 0 0 0 chr15 30314531 30314593 -73180381 + (TC)n Simple_repeat Simple_repeat 2 63 0 4 816 2283 198 62 12 chr15 30314952 30315452 -73179522 - RLTR11A2 LTR ERVK 0 527 3 4 816 1307 284 93 39 chr15 30315716 30316199 -73178775 - Lx7 LINE L1 -961 6735 6227 4 816 297 0 0 0 chr15 30316237 30316270 -73178704 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 4 816 1636 211 54 30 chr15 30316605 30317109 -73177865 + L1_Mur3 LINE L1 2818 3333 -2547 4 816 417 312 65 82 chr15 30317530 30317809 -73177165 + RMER5 LTR ERV1 13 286 -248 4 816 453 239 18 18 chr15 30317847 30317958 -73177016 + RMER5 LTR ERV1 368 478 -56 4 816 417 39 0 0 chr15 30318768 30318819 -73176155 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 816 1445 235 36 36 chr15 30319027 30319389 -73175585 + ORR1D2 LTR MaLR 1 362 -8 4 816 935 273 55 29 chr15 30320659 30321077 -73173897 + L1M2 LINE L1 5355 5783 -529 4 816 486 0 0 0 chr15 30321093 30321147 -73173827 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 816 719 274 48 95 chr15 30321155 30321567 -73173407 - Lx8 LINE L1 0 7473 7081 4 816 24 0 0 0 chr15 30321781 30321805 -73173169 + AT_rich Low_complexity Low_complexity 1 24 0 4 816 1023 241 20 24 chr15 30323289 30323536 -73171438 - ORR1D1 LTR MaLR -127 247 2 4 816 405 287 101 18 chr15 30323712 30323941 -73171033 - MTEb LTR MaLR -3 376 192 4 816 206 121 0 0 chr15 30324218 30324251 -73170723 + (A)n Simple_repeat Simple_repeat 1 33 0 4 816 465 170 36 107 chr15 30324426 30324475 -73170499 - MTEb LTR MaLR -271 108 59 4 816 2906 80 50 12 chr15 30324475 30324892 -73170082 + L1_Mus1 LINE L1 6135 6567 0 4 816 465 170 36 107 chr15 30324892 30324954 -73170020 - MTEb LTR MaLR -321 58 5 4 816 401 296 25 102 chr15 30325117 30325400 -73169574 - L1M2 LINE L1 -478 5822 5564 4 816 633 285 62 122 chr15 30325400 30325803 -73169171 - MTE2b LTR MaLR 0 379 1 4 816 401 296 25 102 chr15 30325803 30325872 -73169102 - L1M2 LINE L1 -737 5563 5497 4 816 699 54 0 0 chr15 30326972 30327064 -73167910 + (TG)n Simple_repeat Simple_repeat 1 92 0 4 816 401 264 35 104 chr15 30327154 30327298 -73167676 - B4A SINE B4 -145 147 14 4 816 1639 67 0 13 chr15 30327580 30327808 -73167166 + L1Md_F3 LINE L1 6358 6582 -2 4 816 1895 238 101 80 chr15 30327865 30328194 -73166780 + RMER17B LTR ERVK 7 356 -602 4 816 5299 51 0 0 chr15 30328194 30328840 -73166134 - L1Md_F2 LINE L1 -12 6570 5925 4 816 1895 245 133 64 chr15 30328840 30329496 -73165478 + RMER17B LTR ERVK 357 899 -9 4 816 724 287 10 44 chr15 30330301 30330505 -73164469 - B3A SINE B2 -1 197 1 4 816 22 0 0 0 chr15 30330865 30330887 -73164087 + AT_rich Low_complexity Low_complexity 1 22 0 4 816 330 26 0 0 chr15 30332338 30332377 -73162597 + (TTA)n Simple_repeat Simple_repeat 3 41 0 4 816 273 325 0 0 chr15 30332384 30332464 -73162510 + ID4 SINE ID 3 82 -1 4 816 314 273 50 20 chr15 30333052 30333153 -73161821 + MIR3 SINE MIR 97 200 -8 4 816 25 0 0 0 chr15 30333651 30333676 -73161298 + AT_rich Low_complexity Low_complexity 1 25 0 4 816 279 144 0 7 chr15 30334929 30334990 -73159984 + B1_Mm SINE Alu 53 139 -8 4 816 189 74 0 0 chr15 30334990 30335017 -73159957 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 816 528 16 0 0 chr15 30335777 30335838 -73159136 + (TCCC)n Simple_repeat Simple_repeat 3 63 0 4 816 349 262 316 16 chr15 30337195 30337439 -73157535 - L1M4b LINE L1 -5119 2215 1899 4 816 256 337 69 0 chr15 30337771 30337872 -73157102 - ID_B1 SINE B4 -6 218 111 4 816 322 363 148 8 chr15 30338068 30338318 -73156656 - L1M4b LINE L1 -6374 960 676 4 816 199 50 75 0 chr15 30338679 30338719 -73156255 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 4 816 434 361 82 22 chr15 30338750 30339118 -73155856 - L1ME1 LINE L1 -343 5836 5447 4 816 230 297 145 48 chr15 30339159 30339325 -73155649 - B3A SINE B2 -16 182 1 4 816 205 310 57 11 chr15 30339873 30339961 -73155013 - MIR3 SINE MIR -3 205 114 4 816 342 258 94 31 chr15 30341513 30341641 -73153333 + MLT1A1 LTR MaLR 272 407 -1 4 816 2023 173 83 16 chr15 30342606 30343029 -73151945 + RLTR31A_Mm LTR ERVK 1 451 -133 4 816 2007 116 122 0 chr15 30343689 30344025 -73150949 - RMER6A LTR ERVK 0 756 390 4 816 396 0 0 0 chr15 30344025 30344069 -73150905 + (TC)n Simple_repeat Simple_repeat 2 45 0 4 816 2007 116 122 0 chr15 30344069 30344093 -73150881 - RMER6A LTR ERVK -367 389 354 4 816 669 162 9 0 chr15 30344084 30344195 -73150779 - RMER6A LTR ERVK -583 173 62 4 816 331 291 68 68 chr15 30344250 30344412 -73150562 + MIRb SINE MIR 75 236 -32 4 816 247 245 0 0 chr15 30344810 30344863 -73150111 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 816 535 212 0 22 chr15 30344980 30345163 -73149811 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 816 264 233 0 0 chr15 30345176 30345249 -73149725 + (TG)n Simple_repeat Simple_repeat 2 74 0 4 816 548 340 25 25 chr15 30345252 30345277 -73149697 - RSINE1 SINE B4 0 165 141 4 816 363 44 0 0 chr15 30345277 30345322 -73149652 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 816 548 340 25 25 chr15 30345322 30345459 -73149515 - RSINE1 SINE B4 -25 140 3 4 816 1368 104 0 5 chr15 30347056 30347249 -73147725 - B2_Mm2 SINE B2 -3 192 1 4 816 590 309 34 6 chr15 30347336 30347515 -73147459 - B3 SINE B2 -6 210 27 4 816 1036 58 7 0 chr15 30347529 30347666 -73147308 - L1_Mus1 LINE L1 -2 6565 6428 4 816 256 171 0 0 chr15 30347666 30347707 -73147267 - B3A SINE B2 -156 42 2 4 816 26 30 0 0 chr15 30347707 30347740 -73147234 + AT_rich Low_complexity Low_complexity 1 33 0 4 816 1088 93 12 0 chr15 30347807 30347969 -73147005 + (TTCTCC)n Simple_repeat Simple_repeat 1 164 0 4 816 244 175 0 31 chr15 30347969 30348034 -73146940 + CT-rich Low_complexity Low_complexity 3 65 0 4 816 1338 262 18 52 chr15 30348056 30348607 -73146367 - Lx5 LINE L1 -412 6646 6125 4 816 309 161 161 0 chr15 30348738 30348831 -73146143 - Lx9 LINE L1 -1 7643 7536 4 816 772 206 35 6 chr15 30348836 30349007 -73145967 + Lx9 LINE L1 7216 7391 -253 4 816 342 0 0 0 chr15 30349532 30349570 -73145404 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 816 741 228 29 23 chr15 30349816 30349991 -73144983 - MTE2a LTR MaLR 0 379 204 4 816 251 261 69 85 chr15 30349975 30350105 -73144869 - MTC-int LTR MaLR -1128 130 3 4 816 273 329 0 25 chr15 30350224 30350305 -73144669 - ID4 SINE ID -1 82 4 4 816 323 283 7 11 chr15 30350320 30350428 -73144546 - PB1D10 SINE Alu -33 116 6 5 816 238 362 57 11 chr15 30351152 30351329 -73143645 - B4 SINE B4 -11 281 86 5 816 434 95 42 0 chr15 30351850 30351945 -73143029 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 5 816 388 62 31 0 chr15 30352011 30352075 -73142899 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 5 816 21 0 0 0 chr15 30352483 30352504 -73142470 + AT_rich Low_complexity Low_complexity 1 21 0 5 816 522 293 5 47 chr15 30352592 30352782 -73142192 + B3A SINE B2 1 182 -16 5 816 311 60 20 0 chr15 30352789 30352839 -73142135 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 816 189 214 13 114 chr15 30352950 30353029 -73141945 - L3 LINE CR1 -3320 1169 1099 5 816 444 51 0 0 chr15 30353348 30353407 -73141567 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 816 567 354 65 32 chr15 30353407 30353796 -73141178 - MER74A LTR ERVL -140 418 16 5 816 207 0 0 0 chr15 30354656 30354679 -73140295 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 816 374 254 0 20 chr15 30354682 30354797 -73140177 - B1F1 SINE Alu -7 110 2 5 816 294 201 62 40 chr15 30355399 30355575 -73139399 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 816 269 216 41 54 chr15 30355656 30355803 -73139171 + (TG)n Simple_repeat Simple_repeat 1 145 0 5 816 189 291 0 0 chr15 30356371 30356457 -73138517 + (CATA)n Simple_repeat Simple_repeat 1 86 0 5 816 472 211 14 0 chr15 30356520 30356662 -73138312 + (CA)n Simple_repeat Simple_repeat 1 144 0 5 816 249 321 45 36 chr15 30357610 30357621 -73137353 - MIR SINE MIR -71 191 184 5 816 378 0 0 0 chr15 30357621 30357663 -73137311 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 816 249 321 45 36 chr15 30357663 30357761 -73137213 - MIR SINE MIR -79 183 81 5 816 715 277 79 87 chr15 30357941 30358194 -73136780 - ORR1E LTR MaLR -2 357 107 5 816 724 232 0 0 chr15 30358232 30358370 -73136604 + B1_Mus2 SINE Alu 3 140 -7 5 816 284 185 31 0 chr15 30358794 30358859 -73136115 + PB1D10 SINE Alu 41 107 -10 5 816 21 0 0 0 chr15 30358919 30358940 -73136034 + AT_rich Low_complexity Low_complexity 1 21 0 5 816 979 250 99 14 chr15 30359298 30359590 -73135384 + ORR1D1-int LTR MaLR 1054 1370 0 5 816 1515 226 16 32 chr15 30359590 30359970 -73135004 + ORR1D1 LTR MaLR 1 374 0 5 816 4924 34 0 5 chr15 30360716 30361301 -73133673 + L1Md_T LINE L1 5999 6580 -2 5 816 545 281 33 0 chr15 30361651 30361772 -73133202 - B1_Mur1 SINE Alu -22 127 3 5 816 948 290 85 25 chr15 30362961 30363325 -73131649 + RMER5 LTR ERV1 113 498 -36 5 816 364 374 29 0 chr15 30364292 30364431 -73130543 + 7SK RNA RNA 98 240 -91 5 816 281 313 42 34 chr15 30364556 30364675 -73130299 - PB1 SINE Alu -7 120 1 5 816 300 360 24 38 chr15 30364892 30365103 -73129871 - L2 LINE L2 -914 2505 2298 5 816 421 286 70 13 chr15 30365954 30366110 -73128864 - MLT1C LTR MaLR -3 464 300 5 816 278 87 0 21 chr15 30366113 30366160 -73128814 + (CCCCG)n Simple_repeat Simple_repeat 4 49 0 5 816 501 366 41 19 chr15 30366172 30366442 -73128532 - MLT1C LTR MaLR -158 309 34 5 816 403 334 89 103 chr15 30366838 30367275 -73127699 - MLT1E3 LTR MaLR -131 493 63 5 816 894 230 75 40 chr15 30369657 30370006 -73124968 + Lx6 LINE L1 7094 7454 -6 5 816 21 57 0 0 chr15 30370306 30370341 -73124633 + AT_rich Low_complexity Low_complexity 1 35 0 5 816 36316 31 0 0 chr15 30371185 30377818 -73117156 - L1Md_T LINE L1 0 6585 1 5 816 225 262 125 47 chr15 30379491 30379619 -73115355 - Tigger11a DNA MER2_type -207 528 391 5 816 360 0 0 0 chr15 30381137 30381177 -73113797 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 816 243 0 0 0 chr15 30381177 30381203 -73113771 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 816 205 311 16 0 chr15 30381299 30381360 -73113614 + (CAT)n Simple_repeat Simple_repeat 1 62 0 5 816 225 214 0 0 chr15 30381300 30381342 -73113632 + (TTA)n Simple_repeat Simple_repeat 2 43 0 5 816 44 0 0 0 chr15 30382515 30382559 -73112415 + AT_rich Low_complexity Low_complexity 1 44 0 5 816 3092 87 9 11 chr15 30384612 30385103 -73109871 + L1_Mus3 LINE L1 6186 6638 0 5 816 221 133 44 0 chr15 30385552 30385597 -73109377 + T-rich Low_complexity Low_complexity 2 48 0 5 816 261 0 0 0 chr15 30385675 30385704 -73109270 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 816 561 52 0 0 chr15 30385704 30385780 -73109194 + (GA)n Simple_repeat Simple_repeat 1 77 0 5 816 384 377 47 58 chr15 30385819 30386095 -73108879 - B4 SINE B4 -16 276 4 5 816 1560 239 36 22 chr15 30386159 30386523 -73108451 + ORR1D1 LTR MaLR 1 369 -5 5 816 216 97 0 0 chr15 30388884 30388915 -73106059 + (T)n Simple_repeat Simple_repeat 1 31 0 5 816 397 227 0 0 chr15 30389174 30389249 -73105725 + ID4 SINE ID 3 77 -6 5 816 195 284 43 52 chr15 30389921 30390036 -73104938 - L2c LINE L2 -8 3379 3266 5 816 1648 197 97 14 chr15 30390555 30390925 -73104049 + MTC LTR MaLR 18 418 -3 5 816 267 308 65 11 chr15 30390938 30391030 -73103944 + L2a LINE L2 3293 3389 -37 5 816 279 79 0 0 chr15 30391053 30391091 -73103883 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 816 203 204 19 0 chr15 30391093 30391147 -73103827 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 5 816 714 239 5 92 chr15 30391370 30391577 -73103397 - B3A SINE B2 -2 196 8 5 816 1398 234 68 11 chr15 30391814 30392004 -73102970 - ORR1D1 LTR MaLR 0 374 167 5 816 543 43 0 0 chr15 30392004 30392074 -73102900 + (GA)n Simple_repeat Simple_repeat 1 70 0 5 816 1398 234 68 11 chr15 30392074 30392237 -73102737 - ORR1D1 LTR MaLR -208 166 1 5 816 2271 96 48 3 chr15 30392268 30392604 -73102370 + Lx LINE L1 6297 6647 -7 5 816 756 262 25 0 chr15 30392644 30392846 -73102128 + B3 SINE B2 1 207 -9 5 816 195 280 81 48 chr15 30394990 30395114 -73099860 + L3 LINE CR1 3710 3837 -652 5 816 592 329 45 51 chr15 30395643 30395935 -73099039 + B4 SINE B4 3 292 0 5 816 24 0 0 0 chr15 30396177 30396201 -73098773 + AT_rich Low_complexity Low_complexity 1 24 0 5 816 1865 107 51 10 chr15 30403034 30403328 -73091646 + Lx2 LINE L1 6689 6994 -3 5 816 308 267 156 55 chr15 30405039 30405328 -73089646 - L1MA8 LINE L1 -114 6177 5860 5 816 294 95 0 0 chr15 30405393 30405435 -73089539 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 816 489 62 0 0 chr15 30405436 30405501 -73089473 + (TC)n Simple_repeat Simple_repeat 2 66 0 5 816 261 0 0 0 chr15 30405501 30405530 -73089444 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 816 251 114 23 0 chr15 30405547 30405591 -73089383 + (TATG)n Simple_repeat Simple_repeat 4 48 0 5 816 22 80 0 0 chr15 30406315 30406365 -73088609 + AT_rich Low_complexity Low_complexity 1 50 0 5 816 268 291 55 55 chr15 30407282 30407391 -73087583 + MamGypLTR3 LTR Gypsy 96 204 -635 5 816 659 341 141 45 chr15 30407489 30408520 -73086454 + L1MEc LINE L1 419 1582 -4818 5 12 604 231 31 31 chr15 30408533 30408725 -73086249 - L1_Rod LINE L1 -93 5754 5563 5 817 21 71 0 0 chr15 30410118 30410160 -73084814 + AT_rich Low_complexity Low_complexity 1 42 0 5 817 220 331 38 3 chr15 30410250 30410359 -73084615 - MIRb SINE MIR -63 199 86 5 817 36 23 0 0 chr15 30411188 30411231 -73083743 + AT_rich Low_complexity Low_complexity 1 43 0 5 817 623 300 49 78 chr15 30411805 30412181 -73082793 - MTEb LTR MaLR 0 379 3 5 817 284 274 0 14 chr15 30415058 30415132 -73079842 + ID4_ SINE ID 2 74 -9 5 817 194 0 39 0 chr15 30415635 30415661 -73079313 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 817 278 159 0 31 chr15 30415716 30415740 -73079234 + polypyrimidine Low_complexity Low_complexity 40 63 0 5 817 297 0 0 0 chr15 30415740 30415773 -73079201 + (TTCC)n Simple_repeat Simple_repeat 3 35 0 5 817 278 159 0 31 chr15 30415773 30415813 -73079161 + polypyrimidine Low_complexity Low_complexity 1 39 0 5 817 255 269 6 22 chr15 30415829 30415949 -73079025 + T-rich Low_complexity Low_complexity 1 118 0 5 817 381 200 50 156 chr15 30415952 30416112 -73078862 - L1_Mur3 LINE L1 -2903 2977 2835 5 817 1661 246 69 16 chr15 30416123 30416686 -73078288 - L1_Mur3 LINE L1 -3350 2530 1938 5 817 467 317 22 16 chr15 30416892 30417049 -73077925 - B4A SINE B4 -10 282 127 5 817 29 0 0 0 chr15 30417166 30417195 -73077779 + AT_rich Low_complexity Low_complexity 1 29 0 5 817 1142 112 6 0 chr15 30418071 30418249 -73076725 + (TCCCC)n Simple_repeat Simple_repeat 2 180 0 5 817 276 30 0 0 chr15 30418249 30418282 -73076692 + (TC)n Simple_repeat Simple_repeat 2 34 0 5 817 372 77 0 0 chr15 30418282 30418334 -73076640 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 817 211 72 23 23 chr15 30421097 30421140 -73073834 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 5 817 23 0 0 0 chr15 30421213 30421236 -73073738 + AT_rich Low_complexity Low_complexity 1 23 0 5 817 889 171 59 12 chr15 30421261 30421563 -73073411 + MTC LTR MaLR 23 418 -3 5 817 547 299 39 63 chr15 30422414 30422700 -73072274 - Tigger7 DNA MER2_type -91 2400 2122 5 817 801 285 94 51 chr15 30423304 30423639 -73071335 + L1MA4 LINE L1 5219 5596 -704 5 817 720 0 0 0 chr15 30423639 30423719 -73071255 + (GA)n Simple_repeat Simple_repeat 1 80 0 5 817 801 283 104 51 chr15 30423719 30423895 -73071079 + L1MA4 LINE L1 5597 5787 -513 5 817 384 22 0 0 chr15 30423895 30423940 -73071034 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 817 801 283 104 51 chr15 30423940 30424063 -73070911 + L1MA4 LINE L1 5788 5923 -377 5 817 1589 249 53 10 chr15 30424772 30425166 -73069808 + MTD LTR MaLR 1 411 -8 5 817 341 299 75 21 chr15 30425364 30425603 -73069371 - L1MA4 LINE L1 -368 5932 5681 5 817 273 57 0 0 chr15 30426526 30426561 -73068413 + (T)n Simple_repeat Simple_repeat 1 35 0 5 817 312 94 0 0 chr15 30428283 30428336 -73066638 + (T)n Simple_repeat Simple_repeat 1 53 0 5 817 232 306 122 61 chr15 30429167 30429348 -73065626 - ORR1E LTR MaLR -167 192 1 5 817 343 252 136 14 chr15 30429455 30429676 -73065298 - L1MA7 LINE L1 0 6291 6044 6 817 603 27 0 0 chr15 30429998 30430071 -73064903 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 6 817 252 262 0 12 chr15 30430083 30430168 -73064806 + (TA)n Simple_repeat Simple_repeat 2 85 0 6 817 296 361 31 12 chr15 30431513 30431673 -73063301 + MER5A1 DNA MER1_type 1 163 -3 6 817 3490 96 4 2 chr15 30432455 30432946 -73062028 - L1_Mus3 LINE L1 -3 6635 6144 6 817 256 162 14 42 chr15 30433132 30433203 -73061771 + T-rich Low_complexity Low_complexity 4 72 0 6 817 1188 68 0 0 chr15 30433203 30433349 -73061625 - B1_Mus1 SINE Alu 0 148 3 6 817 247 366 61 30 chr15 30433751 30433982 -73060992 - LTR82B Low_complexity ERVL -291 539 302 6 817 570 54 0 0 chr15 30434623 30434697 -73060277 + (TAGA)n Simple_repeat Simple_repeat 3 76 0 6 817 1045 308 98 27 chr15 30434728 30435205 -73059769 + MLT2B3 LTR ERVL 5 515 -39 6 817 23 0 0 0 chr15 30436996 30437019 -73057955 + AT_rich Low_complexity Low_complexity 1 23 0 6 817 654 239 39 6 chr15 30437019 30437175 -73057799 - RSINE1 SINE B4 -4 161 1 6 817 4582 72 5 24 chr15 30437182 30437810 -73057164 - L1Md_F2 LINE L1 0 6582 5967 6 817 6292 55 2 12 chr15 30437810 30438651 -73056323 + L1_Mm LINE L1 4836 5668 -215 6 817 519 222 17 12 chr15 30439241 30439414 -73055560 + (CATATA)n Simple_repeat Simple_repeat 3 176 0 6 817 1122 112 0 12 chr15 30440187 30440358 -73054616 + B2_Mm2 SINE B2 2 170 -25 6 817 236 137 0 19 chr15 30440391 30440443 -73054531 + GA-rich Low_complexity Low_complexity 2 52 0 6 817 423 0 0 0 chr15 30440617 30440664 -73054310 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 817 335 174 70 23 chr15 30440701 30440951 -73054023 + (TA)n Simple_repeat Simple_repeat 1 261 0 6 817 271 292 26 53 chr15 30440969 30441121 -73053853 - L1M3 LINE L1 -390 5790 5643 6 817 353 266 6 19 chr15 30443719 30443876 -73051098 + GA-rich Low_complexity Low_complexity 2 156 0 6 817 316 51 0 0 chr15 30443970 30444009 -73050965 - HAL1-3A_ME LINE L1 -842 2016 1978 6 817 183 42 0 0 chr15 30444009 30444033 -73050941 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 6 817 1905 97 138 6 chr15 30446456 30446767 -73048207 + Lx2 LINE L1 6646 6997 0 6 817 1195 149 9 5 chr15 30446857 30447072 -73047902 - Lx2A LINE L1 -541 6467 6252 6 817 190 309 74 0 chr15 30447236 30447317 -73047657 - L2a LINE L2 -103 3323 3237 6 817 209 284 0 0 chr15 30447404 30447471 -73047503 + A-rich Low_complexity Low_complexity 1 67 0 6 817 555 62 0 0 chr15 30447998 30448078 -73046896 + (TG)n Simple_repeat Simple_repeat 2 81 0 6 817 730 77 248 0 chr15 30448470 30448587 -73046387 + B1_Mus1 SINE Alu 3 148 0 6 817 24 67 0 0 chr15 30448870 30448915 -73046059 + AT_rich Low_complexity Low_complexity 1 45 0 6 817 1523 87 14 0 chr15 30448929 30449147 -73045827 + L1_Mus3 LINE L1 6412 6632 -6 6 817 218 102 59 39 chr15 30449154 30449172 -73045802 + (TAAA)n Simple_repeat Simple_repeat 1 19 0 6 817 1120 95 0 0 chr15 30449172 30449319 -73045655 + B1_Mus1 SINE Alu 2 148 0 6 817 218 102 59 39 chr15 30449319 30449351 -73045623 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 6 817 300 330 43 27 chr15 30449354 30450000 -73044974 - L1M3 LINE L1 -1401 4745 4079 6 817 394 331 35 0 chr15 30451595 30451737 -73043237 - RSINE1 SINE B4 -15 150 4 6 817 484 277 74 36 chr15 30452761 30452980 -73041994 - B3A SINE B2 -2 214 1 6 817 432 248 18 106 chr15 30453260 30453373 -73041601 + RSINE1 SINE B4 28 130 -35 6 817 323 338 12 0 chr15 30453429 30453509 -73041465 - MER45R DNA Tip100 -1485 96 16 6 817 237 400 0 0 chr15 30453851 30453936 -73041038 - PB1D10 SINE Alu -11 106 22 6 817 261 0 0 0 chr15 30454899 30454928 -73040046 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 817 26 30 0 0 chr15 30456151 30456184 -73038790 + AT_rich Low_complexity Low_complexity 1 33 0 6 817 414 0 0 0 chr15 30457897 30457943 -73037031 + (TC)n Simple_repeat Simple_repeat 2 47 0 6 817 1418 242 69 11 chr15 30458705 30459052 -73035922 - MTD LTR MaLR -47 372 6 6 817 213 94 0 0 chr15 30460033 30460065 -73034909 + (CATTA)n Simple_repeat Simple_repeat 2 33 0 6 817 885 58 0 35 chr15 30460411 30460555 -73034419 + L1Md_F2 LINE L1 6444 6582 0 6 817 333 0 0 0 chr15 30461108 30461145 -73033829 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 6 817 533 170 9 0 chr15 30461247 30461359 -73033615 + (TA)n Simple_repeat Simple_repeat 1 113 0 6 817 1676 326 65 20 chr15 30462519 30463261 -73031713 - Lx8 LINE L1 -444 7029 6255 6 817 1470 288 63 45 chr15 30463310 30463973 -73031001 + L1_Rod LINE L1 5084 5758 -89 6 817 559 289 7 7 chr15 30464028 30464171 -73030803 - RSINE1 SINE B4 -21 144 2 6 817 765 88 0 21 chr15 30465528 30465668 -73029306 - L1_Mus3 LINE L1 -8 6630 6494 6 817 282 160 20 0 chr15 30466091 30466141 -73028833 - Lx9 LINE L1 -407 7237 7187 6 817 828 236 47 25 chr15 30466177 30466455 -73028519 + Lx9 LINE L1 7330 7613 -31 6 817 1120 324 67 23 chr15 30466843 30467474 -73027500 - Lx7 LINE L1 -2 7471 6796 6 817 522 139 0 0 chr15 30467479 30467565 -73027409 + (TC)n Simple_repeat Simple_repeat 1 86 0 6 817 261 0 0 0 chr15 30467567 30467596 -73027378 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 817 1834 210 29 72 chr15 30467596 30468011 -73026963 + MTD LTR MaLR 23 419 0 6 817 374 325 13 7 chr15 30468011 30468163 -73026811 - Lx7 LINE L1 -893 6803 6651 6 817 318 399 62 14 chr15 30468468 30468743 -73026231 - MLT1A0 LTR MaLR -8 357 70 6 817 758 148 23 0 chr15 30468926 30469054 -73025920 + URR1B DNA MER1_type 95 225 0 6 817 243 0 0 0 chr15 30469231 30469258 -73025716 + (CAAA)n Simple_repeat Simple_repeat 4 30 0 6 817 1410 56 0 0 chr15 30469398 30469578 -73025396 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 6 817 1056 79 6 27 chr15 30469578 30469761 -73025213 + (TCC)n Simple_repeat Simple_repeat 2 180 0 6 817 477 34 0 0 chr15 30470125 30470184 -73024790 + (TC)n Simple_repeat Simple_repeat 2 60 0 6 817 387 0 0 0 chr15 30470184 30470226 -73024748 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 817 510 17 0 0 chr15 30470787 30470846 -73024128 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 6 817 203 309 0 0 chr15 30471078 30471133 -73023841 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 817 2868 135 4 9 chr15 30472546 30473008 -73021966 + Lx3B LINE L1 6509 6968 -5 6 817 24 32 0 0 chr15 30473018 30473049 -73021925 + AT_rich Low_complexity Low_complexity 1 31 0 6 817 705 122 0 0 chr15 30473569 30473684 -73021290 + (TA)n Simple_repeat Simple_repeat 1 115 0 6 817 2021 49 0 0 chr15 30473826 30474073 -73020901 + L1Md_T LINE L1 6336 6582 0 6 817 625 291 78 89 chr15 30475287 30475530 -73019444 + B4A SINE B4 25 267 -25 6 817 504 72 0 0 chr15 30475530 30475599 -73019375 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 6 817 625 291 78 89 chr15 30475599 30475626 -73019348 + B4A SINE B4 268 292 0 6 817 22 0 0 0 chr15 30475659 30475681 -73019293 + AT_rich Low_complexity Low_complexity 1 22 0 6 817 2015 60 0 0 chr15 30476276 30476526 -73018448 + L1_Mus1 LINE L1 6317 6566 -1 6 817 275 141 0 15 chr15 30476666 30476731 -73018243 + (TG)n Simple_repeat Simple_repeat 1 64 0 6 817 1515 230 24 27 chr15 30476804 30477175 -73017799 - ORR1D1 LTR MaLR 0 374 5 6 817 446 328 90 16 chr15 30477186 30477375 -73017599 - B4 SINE B4 -88 204 2 6 817 225 108 0 0 chr15 30478388 30478425 -73016549 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 817 233 333 8 23 chr15 30478434 30478566 -73016408 + (TATG)n Simple_repeat Simple_repeat 2 131 0 6 817 1572 210 15 36 chr15 30478566 30478902 -73016072 - RLTR26 LTR ERVK 0 642 314 6 817 356 306 6 34 chr15 30478971 30479150 -73015824 + (CATA)n Simple_repeat Simple_repeat 2 175 0 6 817 193 265 0 42 chr15 30479227 30479298 -73015676 + MIRc SINE MIR 155 222 -46 6 817 314 332 134 40 chr15 30481208 30481506 -73013468 + L1MD LINE L1 5332 5657 -585 6 817 416 161 0 12 chr15 30481792 30481874 -73013100 + G-rich Low_complexity Low_complexity 1 81 0 6 817 327 85 0 0 chr15 30483326 30483373 -73011601 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 817 422 102 0 14 chr15 30485510 30485580 -73009394 + (GGGA)n Simple_repeat Simple_repeat 1 69 0 6 817 199 384 123 25 chr15 30486304 30486507 -73008467 + L2a LINE L2 2351 2573 -846 6 817 184 333 12 49 chr15 30487233 30487315 -73007659 + L2a LINE L2 3296 3374 -52 6 817 369 0 0 0 chr15 30487995 30488036 -73006938 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 6 817 1789 111 0 11 chr15 30488276 30488549 -73006425 + Lx LINE L1 6379 6648 -6 6 817 473 32 0 16 chr15 30489392 30489456 -73005518 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 817 1077 103 0 0 chr15 30490428 30490564 -73004410 + B1_Mus2 SINE Alu 2 137 -10 6 817 810 277 14 0 chr15 30490849 30491062 -73003912 + B3 SINE B2 1 216 0 6 817 210 37 0 0 chr15 30491405 30491432 -73003542 + (TAA)n Simple_repeat Simple_repeat 2 28 0 6 817 495 0 0 0 chr15 30493034 30493089 -73001885 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 817 249 175 35 0 chr15 30494943 30495000 -72999974 + T-rich Low_complexity Low_complexity 2 60 0 6 817 345 290 21 0 chr15 30495025 30495118 -72999856 + PB1D10 SINE Alu 13 107 -10 6 817 561 311 39 29 chr15 30496184 30496495 -72998479 + L1MC3 LINE L1 7408 7721 -64 6 817 420 20 0 0 chr15 30497271 30497320 -72997654 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 817 1356 91 5 10 chr15 30498569 30498768 -72996206 - ORR1A3 LTR MaLR -8 318 121 6 817 300 27 0 0 chr15 30499125 30499162 -72995812 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 817 496 106 0 21 chr15 30499162 30499258 -72995716 + (GA)n Simple_repeat Simple_repeat 2 95 0 7 817 221 186 0 33 chr15 30499289 30499350 -72995624 + GA-rich Low_complexity Low_complexity 3 61 0 7 817 864 176 0 58 chr15 30500836 30501041 -72993933 + Lx2A1 LINE L1 6811 7003 -5 1 817 375 23 0 0 chr15 30501093 30501137 -72993837 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 817 2524 136 35 2 chr15 30501372 30501799 -72993175 - BGLII_B LTR ERVK 0 441 1 3 817 454 277 80 72 chr15 30502336 30502862 -72992112 - Lx9 LINE L1 -35 7609 7080 4 817 285 146 0 0 chr15 30502921 30502969 -72992005 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 817 224 310 56 33 chr15 30503003 30503093 -72991881 + L2a LINE L2 3335 3426 0 6 817 239 324 28 0 chr15 30503802 30503873 -72991101 + ID4 SINE ID 8 80 -3 7 817 217 238 0 0 chr15 30504008 30504050 -72990924 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 8 817 21 0 0 0 chr15 30504139 30504160 -72990814 + AT_rich Low_complexity Low_complexity 1 21 0 9 817 390 42 0 0 chr15 30505833 30505881 -72989093 + (CATAA)n Simple_repeat Simple_repeat 5 52 0 1 817 578 176 155 31 chr15 30506605 30506724 -72988250 + B1_Mur4 SINE Alu 1 138 -12 1 817 582 15 0 0 chr15 30506724 30506791 -72988183 + (TAAA)n Simple_repeat Simple_repeat 4 70 0 1 817 215 56 56 0 chr15 30506880 30506916 -72988058 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 1 817 881 0 19 0 chr15 30506918 30507022 -72987952 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 1 817 30 27 0 0 chr15 30507434 30507471 -72987503 + AT_rich Low_complexity Low_complexity 1 37 0 1 817 210 71 0 0 chr15 30507653 30507681 -72987293 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 1 817 420 67 0 0 chr15 30507856 30507916 -72987058 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 817 333 0 0 0 chr15 30508091 30508128 -72986846 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 1 817 4243 149 29 35 chr15 30508890 30509795 -72985179 + L1Md_T LINE L1 307 1205 -5411 1 817 34710 32 0 1 chr15 30509801 30514219 -72980755 + L1Md_T LINE L1 1170 5586 -297 1 817 7976 57 0 0 chr15 30514219 30515214 -72979760 + L1Md_T LINE L1 5587 6581 -1 1 817 881 194 71 0 chr15 30516499 30516710 -72978264 - Lx9 LINE L1 -224 7420 7195 2 817 507 138 0 0 chr15 30516711 30516798 -72978176 + (TA)n Simple_repeat Simple_repeat 1 87 0 2 817 348 43 0 0 chr15 30516797 30516843 -72978131 + (GA)n Simple_repeat Simple_repeat 2 47 0 2 817 245 152 0 0 chr15 30516843 30516889 -72978085 + Lx9 LINE L1 7536 7581 -63 2 817 247 313 145 35 chr15 30517380 30517552 -72977422 + MIRb SINE MIR 27 217 -51 2 817 1402 94 44 56 chr15 30517757 30518006 -72976968 - L1_Mus3 LINE L1 -5 6633 6388 2 817 345 350 0 0 chr15 30518297 30518417 -72976557 + (CA)n Simple_repeat Simple_repeat 1 120 0 2 817 246 62 0 0 chr15 30519534 30519566 -72975408 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 817 238 368 0 67 chr15 30519886 30520020 -72974954 - LTR48B LTR ERV1 -519 125 1 2 817 417 256 12 0 chr15 30520044 30520130 -72974844 + 5S rRNA rRNA 4 90 -31 2 817 623 224 0 0 chr15 30520448 30520573 -72974401 - ORR1D2 LTR MaLR -245 125 1 3 817 258 326 0 114 chr15 30521341 30521490 -72973484 - L2c LINE L2 -20 3367 3236 3 817 1165 193 84 35 chr15 30523768 30524052 -72970922 - MTE2a LTR MaLR -12 367 70 3 817 251 150 17 0 chr15 30524693 30524753 -72970221 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 3 817 1086 274 120 27 chr15 30524920 30525295 -72969679 + MTD LTR MaLR 10 419 0 3 817 214 362 45 17 chr15 30525648 30525768 -72969206 - MIRm SINE MIR -108 154 39 3 817 201 267 0 0 chr15 30526253 30526298 -72968676 + (TATG)n Simple_repeat Simple_repeat 3 47 0 3 817 21 0 0 0 chr15 30527095 30527116 -72967858 + AT_rich Low_complexity Low_complexity 1 21 0 3 817 673 241 312 14 chr15 30529299 30529644 -72965330 + Lx8 LINE L1 6131 6578 -895 3 817 23 0 0 0 chr15 30530084 30530107 -72964867 + AT_rich Low_complexity Low_complexity 1 23 0 3 817 304 300 30 52 chr15 30530160 30530392 -72964582 - L1ME2z LINE L1 -103 6341 6115 4 817 292 304 0 0 chr15 30530395 30530461 -72964513 - ORR1D2 LTR MaLR -2 368 303 4 817 4064 194 42 89 chr15 30530461 30531678 -72963296 + RLTR25B LTR ERVK 1 1103 0 4 817 300 216 74 32 chr15 30531678 30531786 -72963188 - ORR1D2 LTR MaLR -62 317 208 4 817 323 240 184 45 chr15 30531919 30532120 -72962854 - L1M5 LINE L1 -462 5702 5474 4 817 768 178 72 0 chr15 30532131 30532283 -72962691 - Lx9 LINE L1 -229 7415 7253 4 817 603 150 227 5 chr15 30532285 30532358 -72962616 + Lx9 LINE L1 7406 7498 -146 4 817 264 59 0 0 chr15 30532358 30532392 -72962582 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 817 324 0 0 0 chr15 30532396 30532432 -72962542 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 817 603 150 227 5 chr15 30532432 30532547 -72962427 + Lx9 LINE L1 7499 7633 -11 4 817 267 31 0 0 chr15 30532724 30532756 -72962218 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 817 216 0 0 0 chr15 30533585 30533609 -72961365 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 817 447 19 0 0 chr15 30533609 30533660 -72961314 + (GA)n Simple_repeat Simple_repeat 1 52 0 4 817 332 322 29 133 chr15 30534073 30534352 -72960622 - MLT1G LTR MaLR -305 286 37 5 817 234 0 0 0 chr15 30535034 30535060 -72959914 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 817 268 165 9 220 chr15 30536167 30536276 -72958698 - Lx8 LINE L1 -445 7028 6943 5 817 549 356 13 0 chr15 30536279 30536504 -72958470 + Lx8 LINE L1 7080 7307 -166 5 817 507 45 0 0 chr15 30536528 30536594 -72958380 + (TG)n Simple_repeat Simple_repeat 2 67 0 5 817 21 0 0 0 chr15 30536659 30536680 -72958294 + AT_rich Low_complexity Low_complexity 1 21 0 5 817 271 316 20 113 chr15 30537528 30537678 -72957296 + B4 SINE B4 1 136 -156 5 817 286 340 48 20 chr15 30537773 30537920 -72957054 - MER45B DNA Tip100 -289 751 601 5 817 282 56 0 0 chr15 30539188 30539224 -72955750 + (T)n Simple_repeat Simple_repeat 1 36 0 5 817 1300 120 107 1 chr15 30539241 30539510 -72955464 - ORR1A2 LTR MaLR -8 386 1 5 817 228 35 0 0 chr15 30539614 30539643 -72955331 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 818 423 68 0 0 chr15 30539850 30539909 -72955065 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 818 180 111 0 0 chr15 30539915 30539942 -72955032 + (GA)n Simple_repeat Simple_repeat 2 28 0 6 818 282 305 158 0 chr15 30539944 30540134 -72954840 - L1MD2 LINE L1 -214 6145 5926 6 818 636 161 29 21 chr15 30540640 30540780 -72954194 + B1_Mm SINE Alu 1 141 -6 6 818 261 119 0 0 chr15 30540965 30541007 -72953967 + (TGGA)n Simple_repeat Simple_repeat 3 44 0 6 818 957 163 102 15 chr15 30543133 30543338 -72951636 - URR1B DNA MER1_type 0 225 3 6 818 390 74 0 0 chr15 30545219 30545273 -72949701 + (CA)n Simple_repeat Simple_repeat 1 54 0 6 818 225 0 0 0 chr15 30545273 30545297 -72949677 + (GA)n Simple_repeat Simple_repeat 2 26 0 6 818 180 0 0 0 chr15 30545671 30545691 -72949283 + (T)n Simple_repeat Simple_repeat 1 20 0 6 818 1082 108 0 0 chr15 30545691 30545839 -72949135 - B1_Mus1 SINE Alu 0 148 1 7 818 369 330 138 16 chr15 30546675 30546980 -72947994 - MLT1C LTR MaLR -8 459 118 7 818 187 205 26 0 chr15 30547414 30547453 -72947521 + MIRc SINE MIR 34 73 -195 7 818 315 244 8 17 chr15 30548294 30548411 -72946563 + (TATATG)n Simple_repeat Simple_repeat 4 119 0 7 818 1324 139 46 0 chr15 30549304 30549520 -72945454 - URR1A DNA MER1_type 0 226 1 7 818 681 282 44 5 chr15 30549703 30549906 -72945068 - ID_B1 SINE B4 -13 211 1 7 818 735 241 116 20 chr15 30549983 30550233 -72944741 - ORR1D2 LTR MaLR -96 274 1 7 818 563 109 0 21 chr15 30550395 30550489 -72944485 + (TATATG)n Simple_repeat Simple_repeat 6 97 0 7 818 192 77 0 0 chr15 30550739 30550765 -72944209 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 7 818 1093 135 5 14 chr15 30550880 30551091 -72943883 + L1_Mus3 LINE L1 6410 6618 -20 7 818 641 176 196 0 chr15 30551897 30552101 -72942873 + Lx9 LINE L1 7401 7644 0 8 818 280 326 178 22 chr15 30552199 30552384 -72942590 + ID_B1 SINE B4 1 214 -10 8 818 397 333 5 22 chr15 30552773 30552926 -72942048 + B3A SINE B2 2 154 -44 8 818 375 23 0 0 chr15 30552926 30552970 -72942004 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 818 397 333 5 22 chr15 30552970 30553000 -72941974 + B3A SINE B2 155 182 -16 8 818 364 320 88 17 chr15 30553554 30553792 -72941182 - L1ME3A LINE L1 -280 5893 5639 8 818 228 273 29 48 chr15 30553807 30553911 -72941063 - RMER12 LTR ERVK -488 834 733 8 818 348 380 25 47 chr15 30554114 30554349 -72940625 - LTR33 LTR ERVL -2 513 284 8 818 231 320 88 88 chr15 30556007 30556178 -72938796 + Charlie1 DNA MER1_type 9 179 -2602 8 818 270 303 11 11 chr15 30556228 30556318 -72938656 + Charlie1 DNA MER1_type 2674 2763 -18 8 818 201 175 0 0 chr15 30559202 30559242 -72935732 + (TAA)n Simple_repeat Simple_repeat 3 42 0 8 818 855 125 0 0 chr15 30560953 30561089 -72933885 + (GGGA)n Simple_repeat Simple_repeat 2 137 0 8 818 213 39 0 0 chr15 30562712 30562738 -72932236 + (T)n Simple_repeat Simple_repeat 1 26 0 9 818 1880 56 4 0 chr15 30562777 30563010 -72931964 - L1Md_F2 LINE L1 -2 6580 6347 9 818 22 0 0 0 chr15 30563221 30563243 -72931731 + AT_rich Low_complexity Low_complexity 1 22 0 9 818 854 122 7 0 chr15 30563329 30563468 -72931506 + (GAAA)n Simple_repeat Simple_repeat 2 141 0 9 818 210 143 0 0 chr15 30564189 30564224 -72930750 + (A)n Simple_repeat Simple_repeat 1 35 0 9 818 633 110 0 0 chr15 30565187 30565287 -72929687 + (CA)n Simple_repeat Simple_repeat 1 100 0 9 818 193 276 11 75 chr15 30567280 30567374 -72927600 - L2a LINE L2 -81 3345 3258 9 818 213 233 9 72 chr15 30567374 30567485 -72927489 + (TTATA)n Simple_repeat Simple_repeat 3 106 0 9 818 190 160 0 39 chr15 30569237 30569289 -72925685 + CT-rich Low_complexity Low_complexity 1 50 0 9 818 207 0 0 0 chr15 30571025 30571048 -72923926 + (CA)n Simple_repeat Simple_repeat 2 24 0 9 818 281 327 59 12 chr15 30571919 30572089 -72922885 - MER3 DNA MER1_type 0 209 32 1 818 486 0 0 0 chr15 30572218 30572272 -72922702 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 818 771 290 139 50 chr15 30572784 30573260 -72921714 - Lx9 LINE L1 -104 7540 7023 1 818 1505 301 63 37 chr15 30573274 30573875 -72921099 - Lx8 LINE L1 -10 7463 6847 1 818 190 305 37 0 chr15 30574237 30574319 -72920655 - MER5A DNA MER1_type -3 186 102 1 818 230 383 8 17 chr15 30574436 30574553 -72920421 - MER5B DNA MER1_type -56 122 7 1 818 227 69 33 49 chr15 30575103 30575164 -72919810 + C-rich Low_complexity Low_complexity 3 62 0 1 818 225 0 0 0 chr15 30575965 30575990 -72918984 + (T)n Simple_repeat Simple_repeat 1 25 0 1 818 27 0 0 0 chr15 30576445 30576472 -72918502 + GC_rich Low_complexity Low_complexity 1 27 0 1 818 23 0 0 0 chr15 30576633 30576656 -72918318 + GC_rich Low_complexity Low_complexity 1 23 0 1 818 22 0 0 0 chr15 30576678 30576700 -72918274 + GC_rich Low_complexity Low_complexity 1 22 0 1 818 198 0 0 0 chr15 30577478 30577500 -72917474 + (CAG)n Simple_repeat Simple_repeat 3 24 0 1 818 252 0 0 0 chr15 30578353 30578381 -72916593 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 1 818 439 316 23 6 chr15 30578634 30578809 -72916165 - HAL1-2a_MD LINE L1 -517 2507 2330 1 818 446 319 22 8 chr15 30578777 30579002 -72915972 - HAL1-2a_MD LINE L1 -517 2507 2345 1 818 22 0 0 0 chr15 30579526 30579548 -72915426 + AT_rich Low_complexity Low_complexity 1 22 0 1 818 195 376 62 28 chr15 30579980 30580158 -72914816 - L2 LINE L2 -581 2838 2655 1 818 522 300 0 0 chr15 30581056 30581196 -72913778 - B1F SINE Alu -9 140 1 1 818 200 164 0 68 chr15 30582116 30582175 -72912799 + (TATAA)n Simple_repeat Simple_repeat 1 55 0 1 818 191 88 29 0 chr15 30582268 30582302 -72912672 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1 818 266 0 29 0 chr15 30583352 30583386 -72911588 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1 818 606 28 0 0 chr15 30584277 30584349 -72910625 + (GGA)n Simple_repeat Simple_repeat 2 73 0 1 818 393 341 62 65 chr15 30584688 30585074 -72909900 + HAL1 LINE L1 796 1180 -1327 1 818 185 380 78 0 chr15 30586053 30586182 -72908792 - L2a LINE L2 -267 3159 3021 1 818 198 71 0 0 chr15 30586896 30586924 -72908050 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 1 818 225 0 0 0 chr15 30587118 30587143 -72907831 + (A)n Simple_repeat Simple_repeat 1 25 0 1 818 209 0 23 68 chr15 30587785 30587829 -72907145 + (TTATA)n Simple_repeat Simple_repeat 4 45 0 1 818 258 250 10 93 chr15 30588460 30588557 -72906417 - MTEa LTR MaLR -289 90 2 1 818 233 291 0 34 chr15 30589334 30589423 -72905551 - MLT1A0 LTR MaLR -5 360 275 1 818 242 116 23 0 chr15 30589441 30589484 -72905490 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 1 818 384 325 19 26 chr15 30589484 30589639 -72905335 - MLT1A0 LTR MaLR -101 264 111 1 818 23 33 0 0 chr15 30590157 30590187 -72904787 + AT_rich Low_complexity Low_complexity 1 30 0 1 818 304 276 32 107 chr15 30590454 30590482 -72904492 + MT2B LTR ERVL 133 221 -380 1 818 690 201 0 7 chr15 30590482 30590617 -72904357 + B1_Mur1 SINE Alu 1 134 -15 1 818 304 276 32 107 chr15 30590617 30590641 -72904333 + MT2B LTR ERVL 222 305 -296 1 818 222 37 0 0 chr15 30591910 30591937 -72903037 + (T)n Simple_repeat Simple_repeat 1 27 0 1 818 2419 131 11 3 chr15 30592262 30592638 -72902336 - Lx2 LINE L1 -6 6991 6613 1 818 248 0 0 30 chr15 30593461 30593494 -72901480 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 818 1227 41 0 7 chr15 30594190 30594338 -72900636 - B1_Mus1 SINE Alu -1 147 1 1 818 235 351 0 0 chr15 30594374 30594485 -72900489 - B1F SINE Alu -34 115 5 1 818 342 0 0 0 chr15 30594746 30594784 -72900190 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 818 350 314 99 14 chr15 30596676 30596899 -72898075 - Lx8 LINE L1 0 7473 7232 1 818 1148 289 6 14 chr15 30596978 30597329 -72897645 - Lx8 LINE L1 -254 7219 6872 1 818 363 185 11 11 chr15 30597984 30598077 -72896897 - Lx9 LINE L1 -2 7642 7550 1 818 21 0 0 0 chr15 30598891 30598912 -72896062 + AT_rich Low_complexity Low_complexity 1 21 0 1 818 1074 106 0 0 chr15 30599453 30599690 -72895284 + (TG)n Simple_repeat Simple_repeat 1 237 0 1 818 25 65 0 0 chr15 30600789 30600835 -72894139 + AT_rich Low_complexity Low_complexity 1 46 0 1 818 485 150 107 22 chr15 30601065 30601192 -72893782 - Lx3B LINE L1 0 7000 6862 1 818 351 0 0 0 chr15 30601264 30601303 -72893671 + (TAA)n Simple_repeat Simple_repeat 3 41 0 1 818 927 77 62 0 chr15 30601304 30601434 -72893540 + B1_Mm SINE Alu 2 139 -8 1 818 207 0 0 0 chr15 30601434 30601457 -72893517 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1 818 4434 67 8 19 chr15 30601494 30602087 -72892887 + L1Md_F2 LINE L1 5984 6570 -12 1 818 396 138 0 0 chr15 30602121 30602186 -72892788 + (CAA)n Simple_repeat Simple_repeat 2 66 0 1 818 326 42 21 0 chr15 30602658 30602706 -72892268 + (TTTTTG)n Simple_repeat Simple_repeat 6 54 0 1 818 1172 48 0 33 chr15 30602706 30602858 -72892116 - B1_Mus1 SINE Alu 0 148 2 1 818 860 223 62 0 chr15 30606242 30606435 -72888539 + B3 SINE B2 6 210 -6 1 818 858 263 9 46 chr15 30607061 30607280 -72887694 + B3 SINE B2 1 211 -5 1 818 739 172 6 13 chr15 30607413 30607572 -72887402 + CT-rich Low_complexity Low_complexity 2 159 0 1 818 414 324 28 7 chr15 30608208 30608351 -72886623 - B1F SINE Alu -2 147 2 1 818 516 300 51 69 chr15 30608791 30609067 -72885907 + B4A SINE B4 12 282 -10 1 818 614 75 0 11 chr15 30609071 30609165 -72885809 + (TC)n Simple_repeat Simple_repeat 1 93 0 1 818 203 214 24 0 chr15 30609740 30609782 -72885192 + MIR SINE MIR 104 146 -62 1 818 748 242 71 0 chr15 30610181 30610379 -72884595 + B3 SINE B2 5 216 0 1 818 479 296 31 21 chr15 30610782 30610975 -72883999 - B4 SINE B4 -95 197 3 1 818 216 311 0 0 chr15 30612583 30612628 -72882346 - ID4 SINE ID -11 72 28 1 818 331 218 20 0 chr15 30614507 30614608 -72880366 + (TA)n Simple_repeat Simple_repeat 1 103 0 1 818 595 294 143 35 chr15 30614618 30614956 -72880018 - MTD LTR MaLR -15 364 21 1 818 424 261 83 8 chr15 30614980 30615100 -72879874 - B1F SINE Alu -10 139 11 1 818 277 323 20 30 chr15 30615964 30616063 -72878911 - RMER30 DNA MER1_type -2 200 103 1 818 414 0 0 0 chr15 30616521 30616567 -72878407 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 818 539 333 71 44 chr15 30616639 30616865 -72878109 - B4A SINE B4 -60 232 1 1 818 360 0 0 0 chr15 30617243 30617283 -72877691 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 818 877 262 64 0 chr15 30617711 30617913 -72877061 - ID_B1 SINE B4 -8 216 2 1 818 277 250 122 26 chr15 30619264 30619420 -72875554 - RLTR21 LTR ERVK -325 1247 1077 1 818 1723 37 0 0 chr15 30620100 30620290 -72874684 - B2_Mm1t SINE B2 -2 191 2 1 818 371 285 140 51 chr15 30620888 30621302 -72873672 + L1MB3 LINE L1 5718 6168 -15 1 818 787 268 65 48 chr15 30621324 30621555 -72873419 + B4A SINE B4 1 235 -57 1 818 575 326 25 35 chr15 30621561 30621754 -72873220 + B3 SINE B2 9 201 -15 1 818 320 0 25 0 chr15 30621754 30621794 -72873180 + (TGAA)n Simple_repeat Simple_repeat 3 43 0 1 818 267 391 0 0 chr15 30621846 30621956 -72873018 + (CA)n Simple_repeat Simple_repeat 1 110 0 1 818 330 197 17 8 chr15 30623227 30623345 -72871629 + (CA)n Simple_repeat Simple_repeat 2 120 0 1 818 457 326 179 9 chr15 30624055 30624379 -72870595 + MLT1B LTR MaLR 1 379 -11 1 818 296 260 123 19 chr15 30625024 30625130 -72869844 + MER5A1 DNA MER1_type 18 134 -32 1 818 424 306 67 26 chr15 30630094 30630362 -72864612 - L2 LINE L2 -611 2808 2530 1 818 233 301 144 24 chr15 30630967 30631134 -72863840 + MIR SINE MIR 42 228 -34 1 818 2352 172 52 2 chr15 30632246 30632647 -72862327 - MTC LTR MaLR 0 421 1 1 818 249 259 14 49 chr15 30632866 30632957 -72862017 + MIR SINE MIR 103 197 -71 1 818 924 285 45 4 chr15 30632974 30633242 -72861732 + Lx8 LINE L1 6842 7120 -353 1 818 324 0 0 0 chr15 30633242 30633278 -72861696 + (TGGA)n Simple_repeat Simple_repeat 1 36 0 1 818 417 206 25 43 chr15 30633281 30633375 -72861599 + (TAGA)n Simple_repeat Simple_repeat 4 95 0 1 818 3171 77 15 5 chr15 30633375 30633778 -72861196 - MTB_Mm LTR MaLR 0 407 1 1 818 781 127 25 17 chr15 30633778 30634007 -72860967 + (TAGA)n Simple_repeat Simple_repeat 1 230 0 1 818 1575 246 92 4 chr15 30634635 30635113 -72859861 - RCHARR1 DNA MER1_type -221 753 234 1 818 287 285 68 68 chr15 30635154 30635301 -72859673 - RCHARR1 DNA MER1_type -825 149 3 1 818 311 292 61 0 chr15 30636077 30636224 -72858750 + MER53 DNA hAT 15 170 -23 1 818 512 15 15 0 chr15 30637053 30637118 -72857856 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 818 199 276 17 0 chr15 30637494 30637552 -72857422 - MIRm SINE MIR -8 268 210 1 818 22 0 0 0 chr15 30637719 30637741 -72857233 + AT_rich Low_complexity Low_complexity 1 22 0 1 818 448 276 53 16 chr15 30638043 30638229 -72856745 - MLT1A0 LTR MaLR -11 379 157 1 818 330 296 44 22 chr15 30638564 30638699 -72856275 + B1F SINE Alu 12 149 0 1 818 219 36 0 0 chr15 30639026 30639054 -72855920 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 818 587 191 39 8 chr15 30640203 30640330 -72854644 - Lx9 LINE L1 -326 7318 7188 1 818 673 233 19 6 chr15 30640325 30640485 -72854489 + Lx9 LINE L1 7320 7481 -163 1 818 204 97 0 0 chr15 30640488 30640519 -72854455 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 818 624 27 0 0 chr15 30640519 30640592 -72854382 + (GA)n Simple_repeat Simple_repeat 1 74 0 1 818 376 184 62 35 chr15 30640592 30640705 -72854269 + Lx9 LINE L1 7521 7636 -8 1 818 282 139 217 48 chr15 30640958 30641041 -72853933 + Lx8 LINE L1 7373 7469 -4 1 818 336 324 104 41 chr15 30642007 30642228 -72852746 + MIR SINE MIR 24 256 -12 2 818 841 159 0 8 chr15 30643899 30644032 -72850942 + Lx LINE L1 6371 6502 -152 2 818 488 340 37 26 chr15 30644653 30644925 -72850049 - Charlie1a DNA MER1_type -666 789 515 2 818 183 42 0 0 chr15 30644931 30644955 -72850019 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 2 818 283 356 87 48 chr15 30645011 30645148 -72849826 - Charlie1a DNA MER1_type -1070 385 252 2 818 198 103 0 0 chr15 30645148 30645177 -72849797 + (CTTG)n Simple_repeat Simple_repeat 2 30 0 2 818 283 356 87 48 chr15 30645177 30645372 -72849602 - Charlie1a DNA MER1_type -1204 251 40 2 818 235 269 45 0 chr15 30645352 30645419 -72849555 - ORR1D2 LTR MaLR -300 70 1 2 818 476 274 131 29 chr15 30645419 30645661 -72849313 + Tigger7 DNA MER2_type 262 528 -1963 2 818 3028 58 0 0 chr15 30646278 30646624 -72848350 + ORR1A1 LTR MaLR 1 346 0 2 818 254 309 134 18 chr15 30646670 30646782 -72848192 - ID_B1 SINE B4 -7 217 93 2 818 634 317 92 11 chr15 30646829 30647091 -72847883 + B4 SINE B4 5 287 -5 2 818 253 319 14 0 chr15 30648449 30648521 -72846453 - LTR16E1 LTR ERVL -1 537 465 2 818 1216 64 0 0 chr15 30648907 30649048 -72845926 + B1_Mm SINE Alu 2 142 -5 2 818 222 37 0 0 chr15 30649055 30649082 -72845892 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 818 243 170 0 0 chr15 30650459 30650506 -72844468 + CT-rich Low_complexity Low_complexity 4 50 0 2 818 312 143 0 0 chr15 30650777 30650833 -72844141 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 818 219 36 0 0 chr15 30650835 30650863 -72844111 + (TAGA)n Simple_repeat Simple_repeat 4 31 0 2 818 621 100 0 0 chr15 30651370 30651460 -72843514 + (GGGA)n Simple_repeat Simple_repeat 4 93 0 2 818 21 0 0 0 chr15 30651602 30651623 -72843351 + AT_rich Low_complexity Low_complexity 1 21 0 2 818 903 316 114 3 chr15 30652133 30652457 -72842517 - MLT2D LTR ERVL -52 362 3 2 818 1630 205 74 14 chr15 30652692 30653058 -72841916 + MTD LTR MaLR 18 405 -14 2 818 477 76 0 0 chr15 30653483 30653549 -72841425 + (CA)n Simple_repeat Simple_repeat 1 66 0 2 818 760 330 36 29 chr15 30653553 30653831 -72841143 - B4A SINE B4 -8 284 5 2 818 952 248 5 23 chr15 30653857 30654076 -72840898 - B3 SINE B2 0 216 2 2 818 318 180 0 0 chr15 30654318 30654379 -72840595 + CT-rich Low_complexity Low_complexity 2 62 0 2 818 384 179 71 12 chr15 30656451 30656536 -72838438 - MTEa LTR MaLR 0 379 290 2 818 364 171 207 0 chr15 30656520 30656602 -72838372 - RMER6A LTR ERVK -596 160 62 2 818 255 242 121 0 chr15 30656613 30656679 -72838295 - MTEa LTR MaLR -96 283 210 2 818 3580 158 132 12 chr15 30656825 30657499 -72837475 + RMER6A LTR ERVK 1 755 -1 2 818 304 317 48 9 chr15 30657712 30657817 -72837157 - MLT1A1 LTR MaLR -251 157 49 2 818 827 299 46 36 chr15 30658084 30658365 -72836609 - B4A SINE B4 0 292 9 2 818 462 341 0 0 chr15 30658604 30658730 -72836244 + RSINE1 SINE B4 3 128 -37 2 818 771 112 0 0 chr15 30659343 30659459 -72835515 + (TA)n Simple_repeat Simple_repeat 1 116 0 2 818 1302 82 0 0 chr15 30659980 30660275 -72834699 + (CA)n Simple_repeat Simple_repeat 1 295 0 2 818 4637 18 0 2 chr15 30660429 30660923 -72834051 - MT2_Mm LTR ERVL 0 493 1 2 818 183 114 0 0 chr15 30661578 30661613 -72833361 + (T)n Simple_repeat Simple_repeat 1 35 0 2 818 5905 221 105 80 chr15 30662112 30663096 -72831878 - Lx7 LINE L1 0 7696 6738 2 818 3848 39 7 5 chr15 30663096 30663539 -72831435 - L1Md_F3 LINE L1 -14 6570 6127 2 818 5905 221 105 80 chr15 30663539 30663712 -72831262 - Lx7 LINE L1 -959 6737 6548 2 818 283 0 71 0 chr15 30663712 30663754 -72831220 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 2 818 5905 221 105 80 chr15 30663754 30664536 -72830438 - Lx7 LINE L1 -1149 6547 5707 2 818 348 266 39 31 chr15 30664671 30664799 -72830175 - Cheshire DNA MER1_type -41 2379 2251 2 818 1439 82 22 0 chr15 30664800 30664982 -72829992 + B2_Mm2 SINE B2 2 187 -8 2 818 246 318 37 0 chr15 30665058 30665165 -72829809 - Cheshire DNA MER1_type -199 2221 2111 2 818 569 270 77 24 chr15 30665328 30665537 -72829437 - Lx8 LINE L1 -167 7306 7087 2 818 3070 169 63 30 chr15 30666485 30667120 -72827854 - RMER6C LTR ERVK -34 656 1 2 818 32 0 0 0 chr15 30667892 30667924 -72827050 + AT_rich Low_complexity Low_complexity 1 32 0 2 818 303 122 0 0 chr15 30669012 30669061 -72825913 + (TATG)n Simple_repeat Simple_repeat 2 50 0 2 818 180 176 0 0 chr15 30669066 30669100 -72825874 + (CATATA)n Simple_repeat Simple_repeat 1 34 0 2 818 195 129 0 0 chr15 30669188 30669219 -72825755 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 818 435 106 0 0 chr15 30669219 30669284 -72825690 + (TA)n Simple_repeat Simple_repeat 1 66 0 2 818 400 291 17 0 chr15 30669776 30669893 -72825081 + B4 SINE B4 170 288 -4 2 819 762 298 164 19 chr15 30672315 30672852 -72822122 - L1MA5 LINE L1 -368 5932 5318 2 819 798 251 30 5 chr15 30673299 30673499 -72821475 + MER58A DNA MER1_type 6 210 -14 2 819 492 300 78 74 chr15 30673865 30674286 -72820688 - MLT1C LTR MaLR -37 430 8 2 819 324 0 0 0 chr15 30676079 30676115 -72818859 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 819 998 235 110 13 chr15 30676851 30677161 -72817813 - Lx7 LINE L1 0 7696 7357 2 819 223 127 0 78 chr15 30677171 30677248 -72817726 + (TAAA)n Simple_repeat Simple_repeat 2 72 0 2 819 996 249 17 8 chr15 30677270 30677509 -72817465 - Lx7 LINE L1 -318 7378 7138 2 819 405 54 0 0 chr15 30677509 30677565 -72817409 + (T)n Simple_repeat Simple_repeat 1 56 0 2 819 38646 33 1 1 chr15 30677567 30684663 -72810311 - L1Md_T LINE L1 0 6585 1 2 819 2149 229 78 2 chr15 30684653 30685166 -72809808 - Lx7 LINE L1 -544 7152 6601 2 819 3190 164 94 27 chr15 30685167 30685920 -72809054 - L1_Mur3 LINE L1 -2359 3521 2718 2 819 890 248 15 10 chr15 30686329 30686529 -72808445 - B3 SINE B2 -14 202 2 2 819 290 200 0 0 chr15 30686859 30686914 -72808060 - MLT1H1 LTR MaLR 0 555 501 2 819 356 352 27 7 chr15 30687076 30687222 -72807752 - MTD LTR MaLR -149 270 122 2 819 433 313 71 22 chr15 30687532 30687715 -72807259 - Lx9 LINE L1 -651 6993 6802 2 819 346 215 0 0 chr15 30690469 30690534 -72804440 + RSINE1 SINE B4 5 69 -96 2 819 231 314 109 7 chr15 30693794 30693932 -72801042 + MER119 DNA MER1_type 177 328 -255 2 819 588 186 7 88 chr15 30694414 30694550 -72800424 - Lx LINE L1 -246 6408 6284 2 819 486 320 81 94 chr15 30694798 30695329 -72799645 + MER90a LTR ERV1 72 595 -19 2 819 1553 189 38 59 chr15 30696047 30696469 -72798505 - Lx9 LINE L1 -6 7638 7226 2 819 320 300 29 0 chr15 30696542 30696682 -72798292 + (CATATA)n Simple_repeat Simple_repeat 4 147 0 2 819 213 154 0 0 chr15 30696983 30697022 -72797952 + CT-rich Low_complexity Low_complexity 3 41 0 2 819 400 176 37 0 chr15 30697052 30697188 -72797786 + (TA)n Simple_repeat Simple_repeat 1 141 0 2 819 195 42 0 0 chr15 30697188 30697212 -72797762 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 819 205 179 0 0 chr15 30697912 30697951 -72797023 + L2 LINE L2 2772 2810 -609 2 819 230 300 192 14 chr15 30698036 30698249 -72796725 + L2 LINE L2 2793 3043 -376 2 819 185 86 57 0 chr15 30698412 30698447 -72796527 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 2 819 273 250 114 30 chr15 30698576 30698708 -72796266 - MLT1C LTR MaLR -203 264 122 2 819 947 91 0 0 chr15 30698806 30698949 -72796025 - L1Md_F2 LINE L1 -2 6580 6438 2 819 6375 63 7 2 chr15 30698949 30699760 -72795214 - L1_Mus1 LINE L1 -9 6558 5744 2 819 310 324 87 43 chr15 30700354 30700654 -72794320 - MLT1D LTR MaLR -159 346 34 2 819 1489 202 36 33 chr15 30700702 30701065 -72793909 - ORR1D1 LTR MaLR -8 366 3 2 819 579 328 53 60 chr15 30701778 30702060 -72792914 + B4A SINE B4 7 286 -6 2 819 214 268 0 0 chr15 30702654 30702710 -72792264 - MIRb SINE MIR -78 190 135 2 819 324 0 0 0 chr15 30703005 30703041 -72791933 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 819 362 355 53 29 chr15 30705920 30706091 -72788883 + MER20 DNA MER1_type 3 177 -42 2 819 324 363 3 3 chr15 30707284 30707524 -72787450 + (TG)n Simple_repeat Simple_repeat 1 240 0 2 819 24 32 0 0 chr15 30709387 30709418 -72785556 + AT_rich Low_complexity Low_complexity 1 31 0 2 819 26 0 0 0 chr15 30709446 30709472 -72785502 + AT_rich Low_complexity Low_complexity 1 26 0 2 819 297 248 77 103 chr15 30710302 30710419 -72784555 - PB1D10 SINE Alu 0 117 4 2 819 216 0 0 0 chr15 30710419 30710443 -72784531 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 819 180 0 0 0 chr15 30711962 30711982 -72782992 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 819 588 167 0 0 chr15 30712979 30713099 -72781875 + (GTTTG)n Simple_repeat Simple_repeat 2 121 0 2 819 224 224 172 16 chr15 30713290 30713388 -72781586 - B1F2 SINE Alu -7 113 1 2 819 24 53 0 0 chr15 30713528 30713566 -72781408 + AT_rich Low_complexity Low_complexity 1 38 0 2 819 1746 294 122 51 chr15 30714948 30715838 -72779136 - RCHARR1 DNA MER1_type -2 972 19 2 819 902 200 79 15 chr15 30716155 30716358 -72778616 + B3 SINE B2 1 216 0 2 819 315 141 0 0 chr15 30716632 30716696 -72778278 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 2 819 192 125 0 0 chr15 30716773 30716805 -72778169 + (GGAA)n Simple_repeat Simple_repeat 3 34 0 2 819 528 16 0 0 chr15 30716826 30716887 -72778087 + (GAGAA)n Simple_repeat Simple_repeat 1 61 0 2 819 478 274 0 0 chr15 30718846 30718970 -72776004 - MLT1D LTR MaLR -1 504 381 2 819 209 180 20 0 chr15 30719041 30719091 -72775883 + CT-rich Low_complexity Low_complexity 2 52 0 2 819 2547 80 3 0 chr15 30719218 30719544 -72775430 + ORR1A2 LTR MaLR 1 327 0 2 819 205 197 14 14 chr15 30721863 30721935 -72773039 + (TA)n Simple_repeat Simple_repeat 1 72 0 2 819 21 0 0 0 chr15 30721942 30721963 -72773011 + AT_rich Low_complexity Low_complexity 1 21 0 2 819 1365 242 37 6 chr15 30721970 30722319 -72772655 - ORR1D2 LTR MaLR -6 364 5 2 819 309 185 0 0 chr15 30722323 30722388 -72772586 + (CATA)n Simple_repeat Simple_repeat 2 66 0 3 819 566 291 31 31 chr15 30723614 30723777 -72771197 + RSINE1 SINE B4 3 165 0 3 819 25 0 0 0 chr15 30726243 30726268 -72768706 + AT_rich Low_complexity Low_complexity 1 25 0 3 819 387 0 0 0 chr15 30728126 30728169 -72766805 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 819 3596 25 2 8 chr15 30730012 30730410 -72764564 - MTA_Mm LTR MaLR 0 396 1 3 819 503 315 29 33 chr15 30730617 30730860 -72764114 - Lx8 LINE L1 -138 7335 7094 3 819 480 274 0 10 chr15 30730854 30730980 -72763994 + Lx8 LINE L1 6768 6913 -560 3 819 668 175 63 42 chr15 30730981 30731124 -72763850 + B1_Mus2 SINE Alu 1 146 -1 3 819 327 269 9 55 chr15 30731159 30731269 -72763705 + Lx8 LINE L1 6922 7026 -447 3 819 209 167 0 0 chr15 30731337 30731373 -72763601 - MIRc SINE MIR -63 205 170 3 819 261 260 123 1 chr15 30731720 30731832 -72763142 + PB1D10 SINE Alu 13 136 -13 3 819 808 269 100 26 chr15 30732240 30732684 -72762290 + L1MC1 LINE L1 5434 5907 -2088 3 819 1279 241 31 31 chr15 30732861 30733148 -72761826 + B4A SINE B4 2 288 -4 3 819 279 0 0 0 chr15 30733336 30733367 -72761607 + (CATA)n Simple_repeat Simple_repeat 2 32 0 3 819 1055 246 72 52 chr15 30733693 30733781 -72761193 - ORR1E LTR MaLR -2 357 270 3 819 333 0 0 0 chr15 30733781 30733818 -72761156 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 819 263 26 51 0 chr15 30733823 30733862 -72761112 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 3 819 1055 246 72 52 chr15 30733862 30734115 -72760859 - ORR1E LTR MaLR -93 266 3 3 819 273 282 180 53 chr15 30737834 30738040 -72756934 + Charlie24 DNA MER1_type 98 329 -2121 3 819 229 309 20 20 chr15 30738198 30738297 -72756677 + Charlie24 DNA MER1_type 562 660 -1790 3 819 264 361 26 26 chr15 30739024 30739175 -72755799 + Charlie24 DNA MER1_type 1858 2008 -442 3 819 180 97 0 0 chr15 30739850 30739881 -72755093 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 819 430 298 39 17 chr15 30739959 30740140 -72754834 + L1MA4 LINE L1 5734 5918 -382 3 819 23 0 0 0 chr15 30740464 30740487 -72754487 + AT_rich Low_complexity Low_complexity 1 23 0 3 819 831 174 264 0 chr15 30741171 30741338 -72753636 - B3 SINE B2 -5 211 1 3 819 696 116 39 0 chr15 30741503 30741658 -72753316 + (TCTCTG)n Simple_repeat Simple_repeat 2 162 0 3 819 306 0 0 0 chr15 30741660 30741694 -72753280 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 819 655 261 182 28 chr15 30744792 30745044 -72749930 + B4A SINE B4 2 292 0 3 819 198 67 43 22 chr15 30748578 30748624 -72746350 + (TTG)n Simple_repeat Simple_repeat 2 48 0 3 819 570 191 9 0 chr15 30749446 30749561 -72745413 + ORR1D2 LTR MaLR 3 118 -252 3 819 324 0 0 0 chr15 30750366 30750402 -72744572 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 819 405 0 0 0 chr15 30750402 30750446 -72744528 + (TC)n Simple_repeat Simple_repeat 1 45 0 3 819 315 0 0 0 chr15 30750446 30750480 -72744494 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 819 347 19 19 0 chr15 30751031 30751085 -72743889 - L1Md_F2 LINE L1 0 6582 6528 3 819 1011 160 77 6 chr15 30752902 30753084 -72741890 + B2_Mm2 SINE B2 1 195 0 3 819 219 114 0 0 chr15 30753564 30753599 -72741375 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 819 22 0 0 0 chr15 30754284 30754306 -72740668 + AT_rich Low_complexity Low_complexity 1 22 0 3 819 24 0 0 0 chr15 30754538 30754562 -72740412 + AT_rich Low_complexity Low_complexity 1 24 0 3 819 342 0 0 0 chr15 30754753 30754791 -72740183 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 819 275 250 15 0 chr15 30756356 30756424 -72738550 + B1_Mur1 SINE Alu 69 137 -12 3 819 635 309 31 76 chr15 30757476 30757767 -72737207 + B4A SINE B4 15 292 0 3 819 390 192 32 6 chr15 30757814 30757971 -72737003 + (CA)n Simple_repeat Simple_repeat 2 162 0 3 819 207 348 108 23 chr15 30758201 30758460 -72736514 + L2 LINE L2 2215 2495 -924 3 819 923 169 0 6 chr15 30758928 30759106 -72735868 + GA-rich Low_complexity Low_complexity 3 179 0 3 819 255 217 0 0 chr15 30759107 30759153 -72735821 + polypurine Low_complexity Low_complexity 1 46 0 3 819 1016 93 7 0 chr15 30759153 30759303 -72735671 + (GAGAA)n Simple_repeat Simple_repeat 4 154 0 3 819 721 274 6 25 chr15 30759396 30759557 -72735417 + RSINE1 SINE B4 5 162 -3 3 819 1171 169 44 70 chr15 30760726 30760955 -72734019 - URR1B DNA MER1_type -1 224 2 3 819 1156 248 0 0 chr15 30761245 30761459 -72733515 + B3 SINE B2 2 215 -1 3 819 251 287 190 7 chr15 30762952 30763089 -72731885 + MIRb SINE MIR 93 254 -14 3 819 4811 237 94 124 chr15 30763130 30763468 -72731506 - Lx7 LINE L1 0 7696 7381 3 819 591 53 0 0 chr15 30763468 30763543 -72731431 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 3 819 4811 237 94 124 chr15 30763543 30764188 -72730786 - Lx7 LINE L1 -316 7380 6766 3 819 258 32 0 0 chr15 30764188 30764219 -72730755 + (TTG)n Simple_repeat Simple_repeat 2 32 0 3 819 5870 193 63 74 chr15 30764219 30766206 -72728768 - Lx7 LINE L1 -931 6765 4773 3 819 194 0 39 0 chr15 30766228 30766254 -72728720 + (TC)n Simple_repeat Simple_repeat 2 28 0 3 819 278 380 48 18 chr15 30766867 30767033 -72727941 + B4A SINE B4 116 286 -6 3 819 210 294 35 0 chr15 30767035 30767120 -72727854 + (CA)n Simple_repeat Simple_repeat 1 88 0 3 819 271 228 0 186 chr15 30767262 30767359 -72727615 + B3 SINE B2 124 202 -14 3 819 21 0 0 0 chr15 30767384 30767405 -72727569 + AT_rich Low_complexity Low_complexity 1 21 0 3 819 714 311 15 5 chr15 30768554 30768751 -72726223 + B3 SINE B2 1 199 -17 3 819 323 270 14 0 chr15 30768754 30768828 -72726146 - B1_Mur3 SINE Alu -73 76 2 3 819 24 0 0 0 chr15 30768841 30768865 -72726109 + AT_rich Low_complexity Low_complexity 1 24 0 3 819 237 250 21 0 chr15 30768936 30769032 -72725942 - Lx9 LINE L1 -89 7555 7458 3 819 503 309 185 13 chr15 30770346 30770657 -72724317 - MLT1F1 LTR MaLR -20 549 160 3 819 387 0 0 0 chr15 30770858 30770901 -72724073 + (TC)n Simple_repeat Simple_repeat 1 43 0 3 819 4077 230 128 19 chr15 30773043 30774181 -72720793 - Lx9 LINE L1 0 7644 6383 3 819 462 152 109 0 chr15 30774279 30774371 -72720603 - RMER12 LTR ERVK -1046 276 175 3 819 494 264 13 26 chr15 30774377 30774529 -72720445 - RMER15 LTR ERVL -90 485 336 3 819 4738 113 49 23 chr15 30775193 30775975 -72718999 + RMER12 LTR ERVK 2 1246 -158 3 819 3094 70 52 3 chr15 30775975 30776363 -72718611 - MTB_Mm LTR MaLR 0 407 1 3 819 355 258 128 70 chr15 30776363 30776588 -72718386 + RMER12 LTR ERVK 1247 1572 0 3 819 387 41 0 0 chr15 30776689 30776738 -72718236 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 819 381 324 129 29 chr15 30776738 30776869 -72718105 - RSINE1 SINE B4 -17 148 3 3 819 286 297 67 38 chr15 30780066 30780171 -72714803 - PB1D9 SINE Alu -7 113 6 3 819 1097 300 94 42 chr15 30783769 30784343 -72710631 - Lx8 LINE L1 -20 7453 6850 3 819 574 296 86 51 chr15 30784344 30784636 -72710338 - Lx7 LINE L1 -934 6762 6461 3 819 255 368 48 7 chr15 30785145 30785290 -72709684 - MLT1B LTR MaLR -107 283 133 3 819 330 330 62 101 chr15 30785387 30785792 -72709182 - LTR16B2 LTR ERVL -72 390 2 3 819 536 332 71 14 chr15 30786083 30786294 -72708680 - B4A SINE B4 0 292 70 3 819 612 262 18 18 chr15 30786635 30786802 -72708172 - Lx5 LINE L1 -345 6705 6539 3 819 189 0 0 0 chr15 30788925 30788946 -72706028 + (GA)n Simple_repeat Simple_repeat 1 21 0 3 819 5040 4 0 0 chr15 30789876 30790429 -72704545 + L1Md_A LINE L1 5034 5586 -297 3 819 9167 4 0 0 chr15 30790429 30791425 -72703549 + L1Md_A LINE L1 5587 6582 0 3 819 558 86 0 0 chr15 30792280 30792361 -72702613 + (CA)n Simple_repeat Simple_repeat 2 82 0 3 819 895 272 99 32 chr15 30793052 30793394 -72701580 - MLT1A0 LTR MaLR 0 365 1 3 819 395 305 143 19 chr15 30794848 30795162 -72699812 - MLT1E2 LTR MaLR -75 552 200 3 819 523 301 21 72 chr15 30795439 30795729 -72699245 - Lx8 LINE L1 -17 7456 7182 3 819 472 331 73 36 chr15 30796889 30797218 -72697756 - MLT1A0 LTR MaLR 0 365 25 3 819 785 201 0 26 chr15 30797886 30798039 -72696935 + B1_Mur2 SINE Alu 1 149 0 3 819 1004 269 80 34 chr15 30798189 30798604 -72696370 - RMER5 LTR ERV1 -15 519 86 3 819 703 278 79 94 chr15 30798640 30799021 -72695953 - MTE2a LTR MaLR 0 379 5 3 819 670 311 56 96 chr15 30800749 30801705 -72693269 - Lx9 LINE L1 -1727 5917 4968 3 819 476 32 0 16 chr15 30801810 30801873 -72693101 + (GA)n Simple_repeat Simple_repeat 1 62 0 3 820 312 111 0 0 chr15 30802036 30802090 -72692884 + (TTTTTG)n Simple_repeat Simple_repeat 1 54 0 3 820 990 304 81 40 chr15 30802264 30803272 -72691702 - L1M3 LINE L1 -1379 4761 3653 3 820 329 247 22 22 chr15 30803279 30803326 -72691648 + polypyrimidine Low_complexity Low_complexity 47 94 0 3 820 2144 112 21 59 chr15 30803326 30803666 -72691308 + ORR1A2 LTR MaLR 1 327 0 3 820 329 247 22 22 chr15 30803666 30803709 -72691265 + polypyrimidine Low_complexity Low_complexity 5 46 0 3 820 537 264 129 53 chr15 30803713 30804053 -72690921 - Lx9 LINE L1 -2174 3673 3308 3 820 296 171 37 0 chr15 30804061 30804143 -72690831 + Lx5 LINE L1 6966 7050 0 3 820 829 302 55 114 chr15 30804162 30805252 -72689722 - L1_Mur3 LINE L1 -3160 2720 1685 3 820 2146 151 45 13 chr15 30805270 30805652 -72689322 - ORR1B1 LTR MaLR 0 394 1 3 820 2639 152 62 8 chr15 30805652 30806168 -72688806 - ORR1B1-int LTR MaLR 0 1509 966 3 820 7851 68 1 6 chr15 30806185 30807606 -72687368 - L1_Mus2 LINE L1 0 6566 5152 3 820 439 252 30 0 chr15 30807748 30807847 -72687127 - PB1D9 SINE Alu -17 103 2 3 820 522 0 0 0 chr15 30807893 30807951 -72687023 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 820 423 0 0 0 chr15 30807951 30807997 -72686977 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 820 1002 139 0 0 chr15 30808548 30808713 -72686261 + (TCC)n Simple_repeat Simple_repeat 1 165 0 3 820 1133 76 0 0 chr15 30809585 30809730 -72685244 + B1_Mm SINE Alu 1 145 -2 3 820 224 30 0 29 chr15 30809730 30809764 -72685210 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 4 820 3355 60 0 7 chr15 30809808 30810224 -72684750 - L1_Mus1 LINE L1 0 6567 6155 4 820 552 42 0 0 chr15 30811274 30811345 -72683629 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 820 28 29 0 0 chr15 30811401 30811436 -72683538 + AT_rich Low_complexity Low_complexity 1 35 0 4 820 700 189 0 15 chr15 30811854 30811988 -72682986 - RMER5 LTR ERV1 -13 521 390 4 820 793 161 86 35 chr15 30811993 30812167 -72682807 - RMER1C Other Other 0 1342 1160 4 820 291 128 0 0 chr15 30812164 30812203 -72682771 + RMER1C Other Other 1103 1141 -201 4 820 752 304 56 49 chr15 30812204 30812594 -72682380 - RMER5 LTR ERV1 -127 407 15 4 820 513 0 0 0 chr15 30812978 30813035 -72681939 + (TC)n Simple_repeat Simple_repeat 1 57 0 4 820 378 0 0 0 chr15 30813035 30813076 -72681898 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 820 797 290 9 0 chr15 30813124 30813338 -72681636 + B3 SINE B2 1 216 0 4 820 224 204 0 0 chr15 30814886 30814930 -72680044 + CT-rich Low_complexity Low_complexity 2 45 0 4 820 371 291 107 13 chr15 30815750 30815900 -72679074 + RSINE1 SINE B4 2 165 0 4 820 192 40 0 0 chr15 30815908 30815933 -72679041 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 820 446 289 27 7 chr15 30816227 30816377 -72678597 - MIR SINE MIR -64 198 46 4 820 210 37 0 0 chr15 30817105 30817132 -72677842 + (TGGG)n Simple_repeat Simple_repeat 2 28 0 4 820 810 102 0 0 chr15 30817132 30817249 -72677725 + (TAGA)n Simple_repeat Simple_repeat 3 120 0 4 820 243 88 0 0 chr15 30817249 30817282 -72677692 + (CAGA)n Simple_repeat Simple_repeat 2 35 0 4 820 497 174 56 40 chr15 30820573 30820587 -72674387 + B4 SINE B4 77 92 -200 4 820 866 118 14 27 chr15 30820587 30820735 -72674239 + B1_Mm SINE Alu 2 147 0 4 820 531 273 16 0 chr15 30821249 30821377 -72673597 + B1_Mur1 SINE Alu 8 137 -12 4 820 5281 31 0 0 chr15 30822594 30823200 -72671774 - L1Md_T LINE L1 0 6582 5977 4 820 5122 12 0 0 chr15 30823200 30823770 -72671204 + L1_Mm LINE L1 5244 5813 -70 4 820 2441 82 0 0 chr15 30824487 30824829 -72670145 - MT2B2 LTR ERVL -242 342 1 4 820 385 242 169 33 chr15 30825310 30825494 -72669480 - MER20 DNA MER1_type 0 219 11 4 820 291 310 48 7 chr15 30827069 30827215 -72667759 - L1MA5 LINE L1 -23 6277 6126 4 820 375 258 23 30 chr15 30827385 30827517 -72667457 + Lx7 LINE L1 7489 7619 -77 4 820 345 226 51 128 chr15 30828089 30828206 -72666768 + RSINE1 SINE B4 58 165 0 4 820 920 118 5 40 chr15 30828206 30828586 -72666388 + (CA)n Simple_repeat Simple_repeat 1 366 0 4 820 320 132 12 35 chr15 30828602 30828688 -72666286 + (CA)n Simple_repeat Simple_repeat 2 85 0 4 820 23 0 0 0 chr15 30828695 30828718 -72666256 + AT_rich Low_complexity Low_complexity 1 23 0 4 820 341 242 26 132 chr15 30828827 30828979 -72665995 - B1F SINE Alu -10 139 4 4 820 459 0 0 0 chr15 30829317 30829368 -72665606 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 820 795 250 46 33 chr15 30829957 30830263 -72664711 - L1_Mur3 LINE L1 -1307 4573 4264 4 820 1997 267 63 33 chr15 30830262 30831131 -72663843 + L1_Rod LINE L1 4559 5523 -641 4 820 451 190 63 40 chr15 30831193 30831319 -72663655 - L1_Rod LINE L1 -291 5556 5428 4 820 1999 306 77 33 chr15 30831343 30832198 -72662776 + Lx9 LINE L1 6531 7423 -221 4 820 346 210 56 42 chr15 30832210 30832354 -72662620 + Lx9 LINE L1 7495 7640 -4 4 820 549 0 0 0 chr15 30833591 30833652 -72661322 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 820 311 70 13 53 chr15 30834034 30834109 -72660865 + (TTTTG)n Simple_repeat Simple_repeat 4 75 0 4 820 1152 55 14 0 chr15 30834110 30834255 -72660719 - B1_Mus2 SINE Alu 0 147 1 4 820 677 175 0 32 chr15 30834731 30834855 -72660119 + B1_Mur2 SINE Alu 2 121 -28 4 820 333 0 0 0 chr15 30836287 30836324 -72658650 + (A)n Simple_repeat Simple_repeat 1 37 0 4 820 506 262 97 23 chr15 30837499 30837946 -72657028 + L1MEc LINE L1 982 1537 -4878 4 820 300 27 0 0 chr15 30838309 30838346 -72656628 + (TC)n Simple_repeat Simple_repeat 2 38 0 4 820 477 110 0 0 chr15 30838346 30838418 -72656556 + (TG)n Simple_repeat Simple_repeat 2 74 0 4 820 615 291 0 15 chr15 30838421 30838557 -72656417 - RSINE1 SINE B4 -30 135 2 4 820 226 202 115 35 chr15 30839213 30839300 -72655674 - L1MC4a LINE L1 -1192 6690 6597 4 820 180 0 0 0 chr15 30839345 30839365 -72655609 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 4 820 763 303 37 20 chr15 30839875 30839930 -72655044 + B4A SINE B4 43 95 -197 4 820 4514 2 0 0 chr15 30839930 30840418 -72654556 + L1Md_A LINE L1 6095 6582 0 4 820 763 303 37 20 chr15 30840418 30840608 -72654366 + B4A SINE B4 96 291 -1 4 820 496 314 149 34 chr15 30842227 30842736 -72652238 + L1MEc LINE L1 320 870 -5530 4 820 531 45 0 0 chr15 30842736 30842802 -72652172 + (GGAA)n Simple_repeat Simple_repeat 1 66 0 4 820 496 314 149 34 chr15 30842802 30842856 -72652118 + L1MEc LINE L1 871 948 -5452 4 820 253 343 11 44 chr15 30843036 30843219 -72651755 + L1MEc LINE L1 1241 1417 -4983 4 820 313 264 155 63 chr15 30844146 30844320 -72650654 - MLT1J1 LTR MaLR -4 440 251 4 820 183 80 0 0 chr15 30844928 30844953 -72650021 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 820 309 68 0 0 chr15 30845814 30845858 -72649116 + (CTA)n Simple_repeat Simple_repeat 1 44 0 4 820 290 271 0 0 chr15 30846156 30846226 -72648748 + B4 SINE B4 19 88 -204 4 820 200 310 88 9 chr15 30848250 30848364 -72646610 + MIR SINE MIR 133 255 -7 4 820 193 57 0 54 chr15 30848488 30848525 -72646449 + (TCTCCC)n Simple_repeat Simple_repeat 6 40 0 4 820 217 0 61 0 chr15 30849122 30849155 -72645819 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 820 375 23 0 0 chr15 30849169 30849213 -72645761 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 820 324 0 0 0 chr15 30850918 30850954 -72644020 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 820 202 91 0 83 chr15 30851228 30851276 -72643698 + CT-rich Low_complexity Low_complexity 2 45 0 4 820 1002 282 170 24 chr15 30852005 30852830 -72642144 - L1MA7 LINE L1 -410 5881 4932 4 820 672 301 231 6 chr15 30854588 30854925 -72640049 + MER47B DNA MER2_type 4 416 -2 4 820 40 87 0 0 chr15 30856187 30856290 -72638684 + AT_rich Low_complexity Low_complexity 1 103 0 4 820 316 284 29 0 chr15 30856299 30856401 -72638573 - Lx9 LINE L1 -175 7469 7365 4 820 22 56 0 0 chr15 30857340 30857376 -72637598 + AT_rich Low_complexity Low_complexity 1 36 0 4 820 1039 138 31 36 chr15 30858991 30859187 -72635787 - B2_Mm2 SINE B2 0 195 1 4 820 459 0 0 0 chr15 30860329 30860380 -72634594 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 820 5420 34 0 0 chr15 30861045 30861672 -72633302 + L1Md_T LINE L1 5956 6582 0 4 820 208 176 20 0 chr15 30862657 30862708 -72632266 + (TTA)n Simple_repeat Simple_repeat 3 54 0 4 820 182 116 0 23 chr15 30862729 30862773 -72632201 + (TAA)n Simple_repeat Simple_repeat 1 43 0 4 820 1196 74 0 0 chr15 30862876 30863024 -72631950 + B1_Mus1 SINE Alu 1 148 0 4 820 21 0 0 0 chr15 30863024 30863045 -72631929 + AT_rich Low_complexity Low_complexity 1 21 0 4 820 225 0 0 0 chr15 30863520 30863545 -72631429 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 820 1332 149 145 10 chr15 30863680 30863984 -72630990 - IAPLTR4 LTR ERVK 0 345 1 4 820 202 125 42 0 chr15 30864362 30864410 -72630564 + CT-rich Low_complexity Low_complexity 4 53 0 4 820 216 158 0 0 chr15 30866636 30866674 -72628300 + A-rich Low_complexity Low_complexity 1 38 0 4 820 1059 202 130 47 chr15 30866763 30866798 -72628176 - Lx7 LINE L1 0 7696 7670 4 820 372 75 0 43 chr15 30866798 30866868 -72628106 - L1_Mus4 LINE L1 0 6636 6570 4 820 1059 202 130 47 chr15 30866868 30867079 -72627895 - Lx7 LINE L1 -27 7669 7422 4 820 207 0 0 0 chr15 30867079 30867102 -72627872 + (GA)n Simple_repeat Simple_repeat 2 24 0 4 820 1059 202 130 47 chr15 30867102 30867239 -72627735 - Lx7 LINE L1 -275 7421 7281 4 820 809 327 66 33 chr15 30867378 30867985 -72626989 - Charlie2b DNA MER1_type -323 2459 1833 4 820 201 253 82 24 chr15 30869426 30869511 -72625463 - L2 LINE L2 -909 2510 2421 4 820 734 222 119 0 chr15 30869677 30869862 -72625112 + B3 SINE B2 5 211 -5 4 820 315 71 0 0 chr15 30870798 30870840 -72624134 + (CATA)n Simple_repeat Simple_repeat 1 42 0 4 820 386 262 105 68 chr15 30873104 30873459 -72621515 - MER110A LTR ERV1 0 468 36 4 820 437 204 0 37 chr15 30874284 30874391 -72620583 + RSINE1 SINE B4 2 104 -61 4 820 24 0 0 0 chr15 30874434 30874458 -72620516 + AT_rich Low_complexity Low_complexity 1 24 0 4 820 550 196 0 43 chr15 30875390 30875577 -72619397 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 820 749 316 104 22 chr15 30875622 30875988 -72618986 - MER89 LTR ERV1 -163 396 1 4 820 189 0 0 0 chr15 30875991 30876012 -72618962 + (GA)n Simple_repeat Simple_repeat 1 21 0 4 820 252 0 0 0 chr15 30876909 30876937 -72618037 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 820 337 329 86 35 chr15 30878097 30878352 -72616622 + B4A SINE B4 12 279 -13 4 820 1347 80 6 0 chr15 30878551 30878903 -72616071 + (TG)n Simple_repeat Simple_repeat 1 354 0 4 820 5733 52 4 0 chr15 30880419 30881125 -72613849 + L1Md_F2 LINE L1 5873 6581 -1 4 820 4571 49 2 5 chr15 30881410 30881969 -72613005 - L1Md_F2 LINE L1 -1 6581 6025 4 820 1104 274 62 36 chr15 30883322 30883708 -72611266 + MTD LTR MaLR 1 396 -23 4 820 204 40 0 0 chr15 30883708 30883733 -72611241 + (CAA)n Simple_repeat Simple_repeat 3 27 0 4 820 1734 299 59 11 chr15 30884446 30885071 -72609903 - Lx8 LINE L1 -1 7472 6818 4 820 261 0 0 0 chr15 30885907 30885936 -72609038 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 820 894 247 17 13 chr15 30887214 30887448 -72607526 - Lx7 LINE L1 -470 7226 6992 4 820 486 192 6 82 chr15 30887450 30887609 -72607365 + Lx7 LINE L1 7269 7415 -281 4 820 251 214 32 116 chr15 30887653 30887748 -72607226 + Lx7 LINE L1 7610 7696 0 4 820 668 194 0 22 chr15 30888712 30888896 -72606078 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 820 757 242 54 50 chr15 30888896 30889118 -72605856 - RMER20B LTR ERVK -25 602 380 5 820 675 139 0 0 chr15 30889170 30889285 -72605689 + (GA)n Simple_repeat Simple_repeat 2 116 0 5 820 305 179 0 0 chr15 30889461 30889517 -72605457 - HAL1-3A_ME LINE L1 -828 2030 1975 5 820 444 82 0 0 chr15 30889517 30889578 -72605396 + (TA)n Simple_repeat Simple_repeat 2 62 0 5 820 980 154 197 0 chr15 30890314 30890502 -72604472 + URR1B DNA MER1_type 1 225 0 5 820 216 67 0 0 chr15 30890764 30890794 -72604180 + (CAT)n Simple_repeat Simple_repeat 1 30 0 5 820 243 0 0 0 chr15 30891075 30891102 -72603872 + (ATTG)n Simple_repeat Simple_repeat 1 27 0 5 820 231 88 0 0 chr15 30891293 30891327 -72603647 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 820 27 29 0 0 chr15 30891708 30891742 -72603232 + AT_rich Low_complexity Low_complexity 1 34 0 5 820 221 276 0 0 chr15 30892217 30892275 -72602699 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 820 270 0 0 0 chr15 30893580 30893610 -72601364 + (ATTG)n Simple_repeat Simple_repeat 3 32 0 5 820 409 257 0 37 chr15 30893616 30893725 -72601249 - ID_B1 SINE B4 -8 216 112 5 820 2479 173 70 15 chr15 30895084 30895559 -72599415 - Lx5 LINE L1 -263 6787 6287 5 820 983 220 122 20 chr15 30895557 30895803 -72599171 + Lx5 LINE L1 6780 7050 0 5 820 213 342 13 0 chr15 30897017 30897093 -72597881 + MIRm SINE MIR 41 117 -159 5 820 207 0 0 0 chr15 30897344 30897367 -72597607 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 820 26 30 0 0 chr15 30900488 30900521 -72594453 + AT_rich Low_complexity Low_complexity 1 33 0 5 820 516 16 0 0 chr15 30900655 30900716 -72594258 + (GA)n Simple_repeat Simple_repeat 1 61 0 5 820 735 355 22 12 chr15 30900719 30901038 -72593936 - Lx8 LINE L1 -142 7331 7010 5 820 2524 121 48 7 chr15 30901414 30901930 -72593044 - RMER4B LTR ERVK -15 570 17 5 820 409 125 0 0 chr15 30902253 30902325 -72592649 - ORR1A2 LTR MaLR -255 72 1 5 820 28 48 0 0 chr15 30902870 30902912 -72592062 + AT_rich Low_complexity Low_complexity 1 42 0 5 820 323 285 196 42 chr15 30902914 30902938 -72592036 - RSINE1 SINE B4 0 165 143 5 820 558 108 0 0 chr15 30902938 30903021 -72591953 + (TA)n Simple_repeat Simple_repeat 2 84 0 5 820 323 285 196 42 chr15 30903021 30903139 -72591835 - RSINE1 SINE B4 -23 142 1 5 820 211 339 43 48 chr15 30903161 30903347 -72591627 - B3 SINE B2 0 216 32 5 820 544 260 11 33 chr15 30903368 30903551 -72591423 - L1MA6 LINE L1 0 6300 6122 5 820 22 0 0 0 chr15 30905735 30905757 -72589217 + AT_rich Low_complexity Low_complexity 1 22 0 5 820 252 0 0 0 chr15 30907910 30907938 -72587036 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 820 21 0 0 0 chr15 30909010 30909031 -72585943 + AT_rich Low_complexity Low_complexity 1 21 0 5 820 243 0 0 0 chr15 30909770 30909797 -72585177 + (TTG)n Simple_repeat Simple_repeat 2 28 0 5 820 458 285 188 0 chr15 30909842 30910049 -72584925 - L1MC1 LINE L1 -15 6318 6073 5 820 324 0 0 0 chr15 30912554 30912590 -72582384 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 820 495 0 0 0 chr15 30912590 30912644 -72582330 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 820 477 255 0 9 chr15 30914588 30914695 -72580279 + PB1D10 SINE Alu 3 108 -9 5 820 325 270 14 0 chr15 30914710 30914784 -72580190 + ID4_ SINE ID 1 75 -8 5 820 230 303 0 0 chr15 30914821 30914887 -72580087 - MLT1J2 LTR MaLR -355 93 28 5 820 957 18 0 0 chr15 30916160 30916271 -72578703 + (GA)n Simple_repeat Simple_repeat 1 111 0 5 820 1907 133 13 0 chr15 30916276 30916591 -72578383 - ORR1A3 LTR MaLR -7 319 1 5 820 2893 297 105 33 chr15 30916606 30918127 -72576847 - Lx9 LINE L1 -175 7469 5719 5 820 577 180 36 9 chr15 30918136 30918248 -72576726 + L1_Rod LINE L1 5553 5667 -180 5 820 8346 35 15 0 chr15 30918320 30919302 -72575672 - L1Md_F3 LINE L1 0 6584 5588 5 820 1021 26 0 0 chr15 30919303 30919417 -72575557 + L1Md_F3 LINE L1 5473 5586 -297 5 820 180 0 0 0 chr15 30921805 30921825 -72573149 + (A)n Simple_repeat Simple_repeat 1 20 0 5 820 225 0 0 0 chr15 30922587 30922612 -72572362 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 820 297 296 6 53 chr15 30923105 30923159 -72571815 + RMER12 LTR ERVK 684 735 -587 5 820 1040 226 33 19 chr15 30923159 30923429 -72571545 + B4A SINE B4 1 274 -18 5 820 297 296 6 53 chr15 30923429 30923545 -72571429 + RMER12 LTR ERVK 736 846 -476 5 820 360 213 23 29 chr15 30923557 30923731 -72571243 + (TATG)n Simple_repeat Simple_repeat 2 174 0 5 820 353 235 0 6 chr15 30923747 30923918 -72571056 + (TG)n Simple_repeat Simple_repeat 1 169 0 5 820 751 122 21 14 chr15 30924535 30924641 -72570333 + polypurine Low_complexity Low_complexity 3 106 0 5 820 1375 34 0 22 chr15 30924641 30924824 -72570150 + (GGAGA)n Simple_repeat Simple_repeat 2 180 0 5 820 751 122 21 14 chr15 30924824 30924858 -72570116 + polypurine Low_complexity Low_complexity 107 143 0 5 820 431 35 18 0 chr15 30925472 30925529 -72569445 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 820 522 309 30 72 chr15 30925576 30925813 -72569161 - B4A SINE B4 -60 232 6 5 820 233 318 36 27 chr15 30925937 30926047 -72568927 + L2 LINE L2 1470 1580 -1839 5 820 39214 39 0 3 chr15 30926417 30932874 -72562100 - L1Md_A LINE L1 0 6585 50 5 821 4607 69 3 28 chr15 30933133 30933744 -72561230 - L1Md_F2 LINE L1 -12 6570 5975 5 821 207 0 0 0 chr15 30937351 30937374 -72557600 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 821 305 103 0 33 chr15 30937670 30937730 -72557244 + (GAAA)n Simple_repeat Simple_repeat 3 60 0 5 821 22 0 0 0 chr15 30938120 30938142 -72556832 + AT_rich Low_complexity Low_complexity 1 22 0 5 821 189 0 0 0 chr15 30938198 30938219 -72556755 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 821 581 95 0 0 chr15 30939472 30939556 -72555418 + B1_Mus2 SINE Alu 1 84 -63 5 821 4427 20 2 0 chr15 30939556 30940048 -72554926 - MT2_Mm LTR ERVL 0 493 1 5 821 321 0 0 0 chr15 30940048 30940086 -72554888 - MERVL-int LTR ERVL 0 5485 5448 5 821 362 167 46 35 chr15 30940086 30940173 -72554801 - ORR1A3-int LTR MaLR -1323 640 553 5 821 40966 13 6 0 chr15 30940173 30945499 -72549475 - MERVL-int LTR ERVL -125 5360 1 5 821 4427 20 2 0 chr15 30945499 30945991 -72548983 - MT2_Mm LTR ERVL 0 493 1 5 821 500 59 0 0 chr15 30945991 30946059 -72548915 + B1_Mm SINE Alu 80 147 0 5 821 295 57 37 19 chr15 30946059 30946113 -72548861 + (CAAAA)n Simple_repeat Simple_repeat 1 55 0 5 821 235 350 7 14 chr15 30947345 30947487 -72547487 + (TGG)n Simple_repeat Simple_repeat 2 142 0 5 821 367 346 113 32 chr15 30949217 30949438 -72545536 + B4 SINE B4 1 239 -53 5 821 450 0 0 0 chr15 30950892 30950942 -72544032 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 821 1104 81 0 0 chr15 30951607 30951768 -72543206 + (TG)n Simple_repeat Simple_repeat 1 161 0 5 821 21 0 0 0 chr15 30952558 30952579 -72542395 + AT_rich Low_complexity Low_complexity 1 21 0 5 821 417 273 91 0 chr15 30952643 30952764 -72542210 + B1F1 SINE Alu 2 133 -16 5 821 297 165 31 70 chr15 30953861 30953986 -72540988 - PB1D7 SINE Alu -1 119 2 5 821 305 311 9 19 chr15 30954037 30954142 -72540832 + GA-rich Low_complexity Low_complexity 1 104 0 5 821 290 354 0 10 chr15 30954416 30954513 -72540461 + MIRc SINE MIR 56 151 -117 5 821 249 198 144 48 chr15 30955747 30955837 -72539137 - B1F SINE Alu -9 140 35 5 821 230 70 16 66 chr15 30956141 30956202 -72538772 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 5 821 272 231 15 0 chr15 30956228 30956293 -72538681 + L1M4 LINE L1 5549 5614 -564 5 821 793 142 104 0 chr15 30956419 30956553 -72538421 - B1_Mus1 SINE Alu 0 148 1 5 821 325 232 54 39 chr15 30956683 30956813 -72538161 + L1MA5 LINE L1 5893 6024 -276 5 821 252 149 0 0 chr15 30957486 30957533 -72537441 + (T)n Simple_repeat Simple_repeat 1 47 0 5 821 198 143 0 0 chr15 30958114 30958149 -72536825 + (A)n Simple_repeat Simple_repeat 1 35 0 5 821 195 170 0 0 chr15 30958445 30958492 -72536482 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 821 24 0 0 0 chr15 30959066 30959090 -72535884 + AT_rich Low_complexity Low_complexity 1 24 0 5 821 358 293 0 20 chr15 30961562 30961663 -72533311 + PB1D10 SINE Alu 10 108 -9 5 821 218 351 0 0 chr15 30961671 30961745 -72533229 + ID4 SINE ID 10 83 0 5 821 225 271 71 0 chr15 30963160 30963230 -72531744 - RMER1C Other Other -18 1324 1250 5 821 2625 296 111 26 chr15 30963170 30963808 -72531166 - Lx8 LINE L1 -6 7467 6740 5 821 1022 204 22 9 chr15 30963808 30964031 -72530943 + URR1A DNA MER1_type 1 226 0 5 821 2625 296 111 26 chr15 30964031 30964628 -72530346 - Lx8 LINE L1 -734 6739 6127 5 821 458 194 6 10 chr15 30964652 30964776 -72530198 + L1_Rod LINE L1 2892 3025 -3121 5 821 4961 229 43 13 chr15 30964798 30965898 -72529076 + Lx9 LINE L1 6382 7514 -130 5 821 204 158 0 0 chr15 30965920 30965958 -72529016 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 5 821 414 264 70 23 chr15 30965968 30966096 -72528878 - Lx9 LINE L1 -276 7368 7235 5 821 201 147 0 0 chr15 30966161 30966195 -72528779 + (TTCCC)n Simple_repeat Simple_repeat 2 35 0 5 821 588 24 47 0 chr15 30966195 30966280 -72528694 + (TTTC)n Simple_repeat Simple_repeat 1 89 0 5 821 699 184 0 0 chr15 30966283 30966424 -72528550 + (ATTG)n Simple_repeat Simple_repeat 2 142 0 5 821 297 337 82 22 chr15 30967286 30967468 -72527506 - MLT1K LTR MaLR -23 572 380 5 821 737 256 124 26 chr15 30967801 30968066 -72526908 + B4A SINE B4 2 292 0 5 821 204 217 0 0 chr15 30969100 30969146 -72525828 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 821 286 241 68 36 chr15 30969328 30969440 -72525534 - B4 SINE B4 -169 123 9 5 821 241 298 11 56 chr15 30969449 30969538 -72525436 + MIR3 SINE MIR 98 182 -26 5 821 881 251 4 39 chr15 30969886 30970118 -72524856 + B4A SINE B4 1 224 -68 5 821 183 146 0 0 chr15 30970118 30970159 -72524815 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 5 821 333 0 0 0 chr15 30970198 30970235 -72524739 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 821 267 31 0 0 chr15 30970235 30970266 -72524708 + (GA)n Simple_repeat Simple_repeat 2 33 0 6 821 1175 75 0 0 chr15 30971330 30971477 -72523497 + B1_Mm SINE Alu 1 147 0 6 821 192 40 0 0 chr15 30971477 30971502 -72523472 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 6 821 825 194 0 0 chr15 30971504 30971674 -72523300 + GA-rich Low_complexity Low_complexity 3 172 0 6 821 180 0 0 0 chr15 30971675 30971695 -72523279 + (GAAAA)n Simple_repeat Simple_repeat 1 20 0 6 821 366 23 0 0 chr15 30971700 30971743 -72523231 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 821 265 238 127 89 chr15 30971827 30971984 -72522990 + MLT1A LTR MaLR 10 172 -202 6 821 247 191 48 0 chr15 30973668 30973731 -72521243 + MLT1A LTR MaLR 411 476 -29 6 821 1446 271 121 42 chr15 30976915 30977341 -72517633 - Lx8 LINE L1 -1 7472 7019 6 821 570 67 0 0 chr15 30977341 30977416 -72517558 + (TCC)n Simple_repeat Simple_repeat 1 75 0 6 821 1446 271 121 42 chr15 30977416 30977586 -72517388 - Lx8 LINE L1 -455 7018 6830 6 821 8321 84 2 7 chr15 30982873 30984609 -72510365 + L1_Mus3 LINE L1 4913 6634 -4 6 821 438 20 0 0 chr15 30985121 30985172 -72509802 + (TC)n Simple_repeat Simple_repeat 2 52 0 6 821 294 29 0 0 chr15 30985172 30985206 -72509768 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 821 603 202 0 0 chr15 30985515 30985718 -72509256 + GA-rich Low_complexity Low_complexity 1 203 0 6 821 625 295 145 57 chr15 30986021 30986405 -72508569 + MT2A LTR ERVL 141 553 -1 6 821 221 233 0 0 chr15 30986405 30986444 -72508530 - ID SINE ID -184 40 2 6 821 3205 26 42 0 chr15 30986462 30986842 -72508132 - MTA_Mm LTR MaLR 0 396 1 6 821 2101 161 16 8 chr15 30987484 30987867 -72507107 + ORR1B1 LTR MaLR 1 386 -8 6 821 261 344 94 30 chr15 30988870 30989200 -72505774 + L1MEg LINE L1 1489 1839 -4245 6 821 409 289 24 16 chr15 30989531 30989654 -72505320 + PB1 SINE Alu 2 125 -2 6 821 211 211 95 40 chr15 30989953 30990027 -72504947 + PB1D10 SINE Alu 40 117 0 6 821 306 289 27 63 chr15 30990682 30990793 -72504181 - PB1D10 SINE Alu -10 107 1 6 821 188 294 14 56 chr15 30993475 30993547 -72501427 + L3b LINE CR1 199 267 -215 6 821 2178 177 5 17 chr15 30993781 30994194 -72500780 - Lx2B LINE L1 -19 6981 6574 6 821 908 251 50 0 chr15 30994674 30994873 -72500101 - B3 SINE B2 -7 209 1 6 821 730 306 49 26 chr15 30995311 30995657 -72499317 + L1MA8 LINE L1 5933 6286 -5 6 821 1221 184 0 9 chr15 30995774 30995999 -72498975 - URR1B DNA MER1_type 0 225 3 6 821 189 107 0 0 chr15 30996246 30996274 -72498700 + (GGA)n Simple_repeat Simple_repeat 3 30 0 6 821 226 255 0 0 chr15 30996335 30996386 -72498588 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 6 821 9237 1 0 0 chr15 30996484 30997793 -72497181 - L1Md_A LINE L1 0 6582 5274 6 821 1488 253 27 20 chr15 30997790 30998193 -72496781 + Lx7 LINE L1 6908 7313 -383 6 821 183 100 0 0 chr15 30998240 30998270 -72496704 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 6 821 23 54 0 0 chr15 30998377 30998414 -72496560 + AT_rich Low_complexity Low_complexity 1 37 0 6 821 24 0 0 0 chr15 30998527 30998551 -72496423 + AT_rich Low_complexity Low_complexity 1 24 0 6 821 414 318 86 43 chr15 30998803 30998929 -72496045 - Lx9 LINE L1 -7 7466 7335 6 821 306 0 0 0 chr15 30998929 30998963 -72496011 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 821 523 318 86 43 chr15 30998963 30999187 -72495787 - Lx9 LINE L1 -195 7449 7102 6 821 1057 261 148 26 chr15 30999184 30999569 -72495405 - Lx9 LINE L1 -465 7179 6748 6 821 793 301 69 33 chr15 30999639 31000000 -72494974 + Lx8 LINE L1 6068 6441 -1032 6 821 338 320 8 47 chr15 31000003 31000131 -72494843 + Lx9 LINE L1 6599 6721 -923 1 821 834 300 100 18 chr15 31000815 31001304 -72493670 - L1MB2 LINE L1 -4 6167 5639 2 821 1129 174 0 5 chr15 31001954 31002151 -72492823 + L1Md_A LINE L1 142 337 -6282 3 821 37514 33 0 1 chr15 31002144 31007079 -72487895 + L1Md_A LINE L1 563 5589 -297 3 821 9072 11 0 0 chr15 31007079 31008075 -72486899 + L1Md_A LINE L1 5590 6585 0 3 821 36521 61 2 0 chr15 31008127 31013484 -72481490 + L1Md_F2 LINE L1 1084 6476 -106 4 821 1847 132 13 0 chr15 31013486 31013788 -72481186 + ORR1A4 LTR MaLR 16 321 -8 5 821 357 169 0 0 chr15 31013937 31013996 -72480978 - Lx3_Mus LINE L1 -323 6686 6628 6 821 2232 90 0 13 chr15 31014000 31014315 -72480659 + Lx3_Mus LINE L1 6699 7009 0 6 821 297 283 34 42 chr15 31015129 31015247 -72479727 + MTEb LTR MaLR 263 379 0 7 821 575 295 204 16 chr15 31015435 31015690 -72479284 + MTE-int LTR MaLR 773 1075 -505 8 821 1121 118 6 0 chr15 31017679 31017857 -72477117 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 9 821 396 250 0 0 chr15 31017857 31017969 -72477005 + (TAGA)n Simple_repeat Simple_repeat 1 112 0 1 821 343 211 185 52 chr15 31018362 31018379 -72476595 - B4A SINE B4 -54 238 86 1 821 518 222 0 8 chr15 31018379 31018497 -72476477 - PB1D10 SINE Alu 0 117 1 1 821 1079 316 8 20 chr15 31019304 31019659 -72475315 + MLT1A0 LTR MaLR 15 365 0 1 821 210 37 0 0 chr15 31019916 31019943 -72475031 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 1 821 325 352 40 16 chr15 31020406 31020530 -72474444 + B1F1 SINE Alu 1 127 -22 1 821 21 36 0 0 chr15 31023543 31023571 -72471403 + AT_rich Low_complexity Low_complexity 1 28 0 1 821 590 287 54 0 chr15 31023626 31023793 -72471181 - MER2 DNA MER2_type -1 344 169 1 821 3176 52 2 36 chr15 31023797 31024218 -72470756 - MTB_Mm LTR MaLR 0 407 1 1 821 439 117 51 28 chr15 31024356 31024532 -72470442 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 821 298 110 69 20 chr15 31024543 31024645 -72470329 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 1 821 1575 297 56 10 chr15 31024645 31025149 -72469825 - MLT2B3 LTR ERVL -20 534 8 2 821 25 0 0 0 chr15 31025214 31025239 -72469735 + AT_rich Low_complexity Low_complexity 1 25 0 2 821 859 168 18 53 chr15 31025274 31025444 -72469530 - Lx9 LINE L1 -229 7415 7252 2 821 373 215 32 0 chr15 31025425 31025505 -72469469 + Lx9 LINE L1 7375 7457 -187 2 821 537 16 0 0 chr15 31025505 31025567 -72469407 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 821 373 215 32 0 chr15 31025567 31025579 -72469395 + Lx9 LINE L1 7458 7469 -175 2 821 180 0 0 0 chr15 31025589 31025609 -72469365 + (GA)n Simple_repeat Simple_repeat 1 20 0 2 821 384 110 13 27 chr15 31025609 31025684 -72469290 + Lx9 LINE L1 7571 7644 0 2 821 522 0 0 0 chr15 31026698 31026756 -72468218 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 821 357 286 10 0 chr15 31026815 31026913 -72468061 + PB1D10 SINE Alu 5 103 -14 2 821 489 161 0 0 chr15 31028311 31028398 -72466576 + (TA)n Simple_repeat Simple_repeat 2 88 0 2 821 297 0 0 0 chr15 31028398 31028431 -72466543 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 821 7069 135 22 183 chr15 31028626 31030498 -72464476 + RLTR21 LTR ERVK 1 1571 -1 3 821 1065 297 26 13 chr15 31030508 31030894 -72464080 - Lx7 LINE L1 -587 7109 6719 3 821 927 270 52 15 chr15 31032496 31032767 -72462207 + ORR1D2 LTR MaLR 1 281 -89 3 821 3288 58 2 0 chr15 31033917 31034316 -72460658 - MTB LTR MaLR 0 400 1 3 821 261 338 121 7 chr15 31035381 31035521 -72459453 - RSINE1 SINE B4 -6 159 4 3 821 423 260 0 0 chr15 31035709 31035832 -72459142 + GA-rich Low_complexity Low_complexity 2 124 0 3 821 543 319 24 10 chr15 31036602 31036808 -72458166 - B3A SINE B2 -3 213 5 3 821 307 245 138 94 chr15 31037691 31037894 -72457080 + Lx8 LINE L1 7253 7464 -9 3 821 27 29 0 0 chr15 31037895 31037929 -72457045 + AT_rich Low_complexity Low_complexity 1 34 0 3 821 944 235 101 49 chr15 31038071 31038438 -72456536 - MLT1B LTR MaLR -3 387 2 3 821 874 287 49 31 chr15 31038821 31039109 -72455865 + MTE2b LTR MaLR 1 293 -86 4 821 350 239 11 11 chr15 31039367 31039456 -72455518 + MTE2b LTR MaLR 262 350 -29 4 821 778 248 94 99 chr15 31039523 31039804 -72455170 + Lx9 LINE L1 7176 7476 -168 4 821 408 20 0 0 chr15 31039804 31039853 -72455121 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 4 821 778 248 94 99 chr15 31039853 31040037 -72454937 + Lx9 LINE L1 7477 7639 -5 4 821 288 0 0 0 chr15 31040140 31040172 -72454802 + (TC)n Simple_repeat Simple_repeat 2 33 0 4 821 456 19 0 0 chr15 31040172 31040224 -72454750 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 821 2294 291 116 16 chr15 31040300 31041710 -72453264 - L1M2 LINE L1 -320 5560 3981 4 821 1792 281 44 2 chr15 31043309 31043787 -72451187 + Lx8 LINE L1 6422 6919 -554 4 821 303 93 0 0 chr15 31043826 31043869 -72451105 + (TAA)n Simple_repeat Simple_repeat 3 45 0 4 821 1066 238 111 38 chr15 31043989 31044330 -72450644 - ORR1D1 LTR MaLR -6 368 3 4 821 662 321 12 63 chr15 31044352 31044564 -72450410 + Lx9 LINE L1 7110 7315 -329 4 821 1977 182 62 17 chr15 31044564 31044967 -72450007 - MTC LTR MaLR 0 421 1 5 821 662 321 12 63 chr15 31044967 31045073 -72449901 + Lx9 LINE L1 7316 7412 -232 4 821 590 194 11 39 chr15 31045457 31045639 -72449335 + G-rich Low_complexity Low_complexity 3 179 0 5 821 237 225 34 0 chr15 31045617 31045706 -72449268 + GA-rich Low_complexity Low_complexity 1 92 0 5 821 333 0 0 0 chr15 31045795 31045832 -72449142 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 821 902 248 67 43 chr15 31047983 31048337 -72446637 + MTD LTR MaLR 3 403 -16 5 821 244 327 58 39 chr15 31049141 31049297 -72445677 + MER20 DNA MER1_type 13 171 -48 5 821 332 117 52 0 chr15 31049545 31049622 -72445352 + GA-rich Low_complexity Low_complexity 1 81 0 5 821 489 202 83 8 chr15 31050568 31050688 -72444286 - Lx5 LINE L1 0 7050 6922 5 821 405 0 0 0 chr15 31050697 31050742 -72444232 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 821 1390 218 102 2 chr15 31050746 31051156 -72443818 + RCHARR1 DNA MER1_type 520 970 -4 5 821 1520 245 140 17 chr15 31051228 31051546 -72443428 - L1_Rod LINE L1 -727 5120 4763 6 821 231 36 0 0 chr15 31051546 31051574 -72443400 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 6 821 1520 245 140 17 chr15 31051574 31051782 -72443192 - L1_Rod LINE L1 -1085 4762 4530 6 821 1487 199 52 39 chr15 31051796 31052182 -72442792 + L1_Rod LINE L1 5143 5533 -314 6 821 3531 254 49 12 chr15 31052189 31053106 -72441868 + Lx9 LINE L1 6340 7290 -354 6 821 267 31 0 0 chr15 31053232 31053264 -72441710 + (GA)n Simple_repeat Simple_repeat 1 32 0 6 821 895 250 91 76 chr15 31053422 31053764 -72441210 + Lx9 LINE L1 7295 7641 -3 6 821 1170 61 0 7 chr15 31053944 31054092 -72440882 + B1_Mus1 SINE Alu 2 148 0 6 821 506 261 77 51 chr15 31054385 31054619 -72440355 + MER31B LTR ERV1 130 369 -97 6 821 308 49 0 0 chr15 31054657 31054698 -72440276 - B1_Mus2 SINE Alu -106 41 1 6 821 309 320 57 38 chr15 31054698 31054827 -72440147 - MT2B LTR ERVL -344 257 126 6 821 317 255 174 67 chr15 31055916 31056244 -72438730 + ORR1D2 LTR MaLR 5 367 -3 6 821 606 280 45 52 chr15 31056261 31056705 -72438269 + ORR1D2-int LTR MaLR 14 508 -1001 6 821 519 336 54 123 chr15 31057056 31057558 -72437416 + ORR1D2-int LTR MaLR 592 1058 -522 6 821 32 0 0 0 chr15 31057558 31057590 -72437384 + AT_rich Low_complexity Low_complexity 1 32 0 7 821 655 305 35 10 chr15 31059963 31060165 -72434809 + ID_B1 SINE B4 10 216 -8 7 821 248 185 70 53 chr15 31061317 31061374 -72433600 + ID4_ SINE ID 15 72 -11 7 821 579 96 0 0 chr15 31061382 31061465 -72433509 + (GGAA)n Simple_repeat Simple_repeat 4 86 0 7 821 549 302 91 26 chr15 31061965 31062274 -72432700 - MLT1A0 LTR MaLR -6 359 31 7 821 463 298 53 29 chr15 31062364 31062609 -72432365 + L1M5 LINE L1 5283 5533 -640 7 821 735 278 115 4 chr15 31062919 31063179 -72431795 - Lx8 LINE L1 0 7473 7185 7 821 998 221 34 0 chr15 31063284 31063492 -72431482 - B3 SINE B2 -1 215 1 7 821 757 286 23 40 chr15 31063550 31063836 -72431138 + MLT1D LTR MaLR 201 501 -4 7 822 1975 118 60 34 chr15 31065392 31065743 -72429231 - Lx3C LINE L1 -7 6969 6610 7 822 6883 123 9 17 chr15 31065852 31067200 -72427774 - Lx LINE L1 0 6654 5315 8 822 411 21 0 0 chr15 31070244 31070292 -72424682 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 822 344 277 0 32 chr15 31070819 31070942 -72424032 - MER96B DNA hAT -48 369 251 8 822 5267 71 0 6 chr15 31071971 31072648 -72422326 - L1Md_F2 LINE L1 -13 6569 5897 8 822 704 291 81 34 chr15 31072772 31073092 -72421882 + MLT1A0 LTR MaLR 21 355 -10 8 822 232 294 15 0 chr15 31074407 31074475 -72420499 + MLT1A0 LTR MaLR 435 503 -9 8 822 954 44 111 0 chr15 31074538 31074673 -72420301 - B2_Mm2 SINE B2 -45 150 1 8 822 860 199 141 27 chr15 31074685 31074940 -72420034 - MTC LTR MaLR -2 419 135 8 822 195 42 0 0 chr15 31074940 31074964 -72420010 + (CAAT)n Simple_repeat Simple_repeat 3 26 0 8 822 12957 83 4 2 chr15 31075021 31077477 -72417497 + L1_Mus1 LINE L1 4104 6566 -1 8 822 180 0 0 0 chr15 31077557 31077577 -72417397 + (A)n Simple_repeat Simple_repeat 1 20 0 8 822 537 295 112 25 chr15 31077932 31078255 -72416719 - ORR1E LTR MaLR -5 354 4 9 822 324 0 0 0 chr15 31078362 31078398 -72416576 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 822 508 274 55 6 chr15 31078519 31078684 -72416290 + MER58A DNA MER1_type 52 224 0 9 822 291 347 58 23 chr15 31079196 31079367 -72415607 + LTR88c LTR Genie? 207 383 -479 9 822 300 211 0 0 chr15 31080034 31080105 -72414869 + (CA)n Simple_repeat Simple_repeat 2 72 0 9 822 305 91 0 0 chr15 31080157 31080201 -72414773 + HAL1-3A_ME LINE L1 1975 2018 -840 9 822 338 297 147 9 chr15 31080218 31080429 -72414545 - LTR16A1 LTR ERVL -9 447 208 9 822 230 315 89 9 chr15 31081719 31081831 -72413143 + MER5A DNA MER1_type 1 121 -68 9 822 328 313 13 20 chr15 31082341 31082483 -72412491 - MLT1C LTR MaLR -8 459 241 9 822 348 214 17 35 chr15 31083616 31083790 -72411184 + GA-rich Low_complexity Low_complexity 1 171 0 9 822 508 326 50 10 chr15 31084196 31084394 -72410580 + MamGypLTR2c LTR Gypsy 861 1066 -2 1 822 522 266 25 61 chr15 31084592 31084788 -72410186 - MLT1K LTR MaLR -1 594 406 1 822 273 311 142 51 chr15 31085678 31086010 -72408964 + MLT1K LTR MaLR 194 555 -40 1 822 488 30 0 15 chr15 31086372 31086439 -72408535 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 822 311 340 18 67 chr15 31086519 31086683 -72408291 + MLT1A LTR MaLR 7 162 -212 1 822 373 268 7 13 chr15 31086688 31086843 -72408131 + CT-rich Low_complexity Low_complexity 1 154 0 1 822 879 141 11 6 chr15 31086852 31086921 -72408053 + polypyrimidine Low_complexity Low_complexity 112 180 0 1 822 983 95 29 0 chr15 31086921 31087058 -72407916 - B1_Mus2 SINE Alu -6 141 1 1 822 879 141 11 6 chr15 31087058 31087167 -72407807 + polypyrimidine Low_complexity Low_complexity 2 111 0 1 822 340 351 36 21 chr15 31088104 31088296 -72406678 - Lx8 LINE L1 -227 7246 7052 1 822 822 229 131 60 chr15 31088314 31088727 -72406247 - MT2B LTR ERVL -55 546 92 1 822 1567 188 3 28 chr15 31088744 31088858 -72406116 + L1_Mur2 LINE L1 205 313 -6399 1 822 868 197 308 62 chr15 31088858 31089313 -72405661 - RMER2 LTR ERV1 0 567 1 1 822 1567 188 3 28 chr15 31089313 31089521 -72405453 + L1_Mur2 LINE L1 314 519 -6193 1 822 1665 50 0 5 chr15 31089522 31089742 -72405232 - MTB LTR MaLR 0 400 182 1 822 21968 48 0 4 chr15 31089746 31093170 -72401804 - L1Md_F2 LINE L1 -12 6570 3160 1 822 1323 72 26 5 chr15 31093171 31093366 -72401608 - MTB LTR MaLR -201 199 1 1 822 215 224 0 0 chr15 31093366 31093415 -72401559 + Alu SINE Alu 28 76 -99 1 822 504 32 0 0 chr15 31093540 31093602 -72401372 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 822 188 282 84 0 chr15 31093729 31093800 -72401174 + MIRb SINE MIR 124 200 -68 1 822 567 274 75 117 chr15 31094880 31095120 -72399854 + B4 SINE B4 3 232 -60 1 822 515 90 13 0 chr15 31095232 31095310 -72399664 + (GA)n Simple_repeat Simple_repeat 1 79 0 1 822 281 327 10 0 chr15 31095531 31095635 -72399339 - MLT1E1A LTR MaLR -30 650 546 1 822 261 298 163 11 chr15 31096184 31096374 -72398600 - LTR50 LTR ERVL -574 221 3 1 822 226 307 77 29 chr15 31097035 31097139 -72397835 + PB1D10 SINE Alu 2 110 -7 1 822 324 0 0 0 chr15 31097178 31097214 -72397760 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 822 416 335 43 47 chr15 31097216 31097448 -72397526 + Tigger5 DNA MER2_type 7 237 -2169 1 822 253 298 125 0 chr15 31097452 31097556 -72397418 + Tigger5 DNA MER2_type 2290 2406 0 1 822 567 0 0 0 chr15 31097640 31097703 -72397271 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 822 196 337 45 0 chr15 31098589 31098678 -72396296 - MIRc SINE MIR -68 200 108 1 822 235 257 68 0 chr15 31099378 31099452 -72395522 + MIR3 SINE MIR 109 187 -21 1 822 414 0 0 0 chr15 31101978 31102024 -72392950 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 822 21 0 0 0 chr15 31104252 31104273 -72390701 + AT_rich Low_complexity Low_complexity 1 21 0 1 822 364 236 10 41 chr15 31104744 31104841 -72390133 + PB1D10 SINE Alu 10 103 -14 1 822 213 175 0 0 chr15 31104846 31104886 -72390088 + GA-rich Low_complexity Low_complexity 3 42 0 1 822 1620 0 0 0 chr15 31105515 31106442 -72388532 + (CTCTG)n Simple_repeat Simple_repeat 1 927 0 1 822 481 15 15 15 chr15 31106936 31107003 -72387971 + (CA)n Simple_repeat Simple_repeat 1 67 0 1 822 225 303 112 0 chr15 31107112 31107213 -72387761 + MIRc SINE MIR 2 108 -160 1 822 292 231 118 30 chr15 31107294 31107412 -72387562 + B1F1 SINE Alu 1 128 -22 1 822 3000 187 102 48 chr15 31107887 31108253 -72386721 - RLTR40 LTR ERVK 0 817 432 1 822 597 64 0 0 chr15 31108253 31108331 -72386643 + (TC)n Simple_repeat Simple_repeat 1 78 0 1 822 3000 187 102 48 chr15 31108331 31108739 -72386235 - RLTR40 LTR ERVK -386 431 1 1 822 322 271 36 65 chr15 31109183 31109321 -72385653 + Lx8 LINE L1 7209 7342 -131 1 822 26 64 0 0 chr15 31109401 31109448 -72385526 + AT_rich Low_complexity Low_complexity 1 47 0 1 822 239 271 146 83 chr15 31109798 31110051 -72384923 + L1MC5 LINE L1 6923 7191 -770 1 822 1328 63 17 11 chr15 31110506 31110683 -72384291 + B2_Mm1t SINE B2 2 179 -14 1 822 360 98 321 9 chr15 31110720 31110832 -72384142 + B2_Mm2 SINE B2 47 193 -2 1 822 553 318 116 4 chr15 31110866 31111125 -72383849 + B4A SINE B4 5 292 0 1 822 12298 23 0 0 chr15 31111446 31112853 -72382121 + L1Md_T LINE L1 4180 5586 -297 1 822 8131 56 0 0 chr15 31112853 31113848 -72381126 + L1Md_T LINE L1 5587 6581 -1 1 822 28 29 0 0 chr15 31113859 31113894 -72381080 + AT_rich Low_complexity Low_complexity 1 35 0 1 822 450 0 0 0 chr15 31114009 31114059 -72380915 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 822 518 321 55 58 chr15 31114894 31115185 -72379789 + B4 SINE B4 1 290 -2 1 822 1355 89 11 0 chr15 31116011 31116190 -72378784 + B2_Mm1t SINE B2 1 181 -12 1 822 317 130 19 19 chr15 31116219 31116281 -72378693 + B2_Mm2 SINE B2 46 112 -86 1 822 653 311 120 10 chr15 31116709 31117008 -72377966 - MLT1B LTR MaLR -6 384 53 1 822 222 118 0 0 chr15 31117666 31117700 -72377274 + (T)n Simple_repeat Simple_repeat 1 34 0 1 822 890 78 102 0 chr15 31117700 31117828 -72377146 - B1_Mus1 SINE Alu 0 148 8 1 822 270 216 101 67 chr15 31117745 31117864 -72377110 - MT2B LTR ERVL -344 257 135 1 822 215 0 67 0 chr15 31118498 31118528 -72376446 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 1 822 709 243 209 20 chr15 31118647 31118891 -72376083 + B4 SINE B4 1 290 -2 1 822 438 53 0 0 chr15 31118899 31118956 -72376018 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 822 1374 56 0 0 chr15 31119176 31119862 -72375112 + (TG)n Simple_repeat Simple_repeat 1 686 0 1 822 1329 89 26 10 chr15 31119925 31120117 -72374857 - B2_Mm2 SINE B2 0 195 1 1 822 656 317 50 70 chr15 31121198 31121541 -72373433 - MLT1H LTR MaLR -190 359 24 1 822 868 192 41 0 chr15 31121739 31121911 -72373063 + B3A SINE B2 4 182 -16 1 822 243 159 0 96 chr15 31122267 31122455 -72372519 + (TGG)n Simple_repeat Simple_repeat 1 170 0 1 822 373 208 0 96 chr15 31122455 31122694 -72372280 + (TGG)n Simple_repeat Simple_repeat 1 215 0 1 822 565 209 0 9 chr15 31123524 31123640 -72371334 - RMER1B Other Other -12 1054 940 1 822 603 202 8 16 chr15 31123655 31123781 -72371193 - RMER1B Other Other -180 886 762 1 822 405 0 0 0 chr15 31123814 31123859 -72371115 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 822 518 222 54 23 chr15 31124516 31124645 -72370329 - RMER5 LTR ERV1 0 534 402 1 822 576 0 0 0 chr15 31124646 31124710 -72370264 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 822 214 297 106 40 chr15 31125106 31125257 -72369717 + MIRb SINE MIR 51 211 -57 1 822 489 239 43 0 chr15 31125373 31125490 -72369484 - MER63A DNA AcHobo -59 151 30 1 822 1195 235 132 45 chr15 31126517 31126712 -72368262 - RMER5 LTR ERV1 0 534 334 1 822 1517 144 172 33 chr15 31126712 31126889 -72368085 - RMER17C LTR ERVK 0 410 181 1 822 522 31 0 0 chr15 31126889 31126953 -72368021 + (GA)n Simple_repeat Simple_repeat 2 65 0 1 822 1517 144 172 33 chr15 31126953 31127135 -72367839 - RMER17C LTR ERVK -230 180 1 1 822 1195 235 132 45 chr15 31127135 31127340 -72367634 - RMER5 LTR ERV1 -201 333 99 1 822 1507 248 84 13 chr15 31127523 31127903 -72367071 - MTD LTR MaLR 0 419 13 1 822 1815 123 14 54 chr15 31128376 31128575 -72366399 + RMER17C LTR ERVK 1 193 -217 1 822 441 0 0 0 chr15 31128575 31128624 -72366350 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 822 1815 123 14 54 chr15 31128624 31128792 -72366182 + RMER17C LTR ERVK 194 353 -57 1 822 2214 85 3 0 chr15 31128787 31129081 -72365893 - ORR1A2 LTR MaLR -32 295 1 1 822 318 356 83 0 chr15 31129084 31129264 -72365710 + MIRb SINE MIR 29 223 -45 1 822 661 276 82 81 chr15 31129345 31129778 -72365196 + MLT1B LTR MaLR 1 361 -29 1 822 5802 158 33 39 chr15 31130453 31131624 -72363350 + L1Md_T LINE L1 99 1205 -5411 1 822 37064 31 0 0 chr15 31131630 31136046 -72358928 + L1Md_T LINE L1 1170 5586 -297 1 822 8164 55 0 0 chr15 31136046 31137042 -72357932 + L1Md_T LINE L1 5587 6582 0 1 822 573 350 15 10 chr15 31137777 31137973 -72357001 + MER2 DNA MER2_type 145 341 -4 1 822 528 132 176 0 chr15 31138000 31138091 -72356883 + Lx7 LINE L1 6863 6969 -727 1 822 945 122 0 0 chr15 31138093 31138240 -72356734 + (GGA)n Simple_repeat Simple_repeat 3 149 0 1 822 227 262 15 15 chr15 31138242 31138308 -72356666 + GA-rich Low_complexity Low_complexity 5 70 0 1 822 1795 210 13 100 chr15 31138309 31138769 -72356205 + Lx7 LINE L1 6964 7383 -313 1 822 1124 181 121 4 chr15 31139114 31139363 -72355611 + ORR1D1 LTR MaLR 97 374 0 1 822 225 255 165 31 chr15 31139363 31139440 -72355534 - MLT1A LTR MaLR -56 318 229 1 822 365 275 87 128 chr15 31139923 31140211 -72354763 + MTEa LTR MaLR 3 278 -101 1 822 358 325 58 0 chr15 31140752 31140872 -72354102 + MLT1A0 LTR MaLR 3 129 -236 1 822 253 358 28 0 chr15 31140980 31141089 -72353885 + MLT1A0 LTR MaLR 297 408 0 1 822 24 32 0 0 chr15 31141282 31141313 -72353661 + AT_rich Low_complexity Low_complexity 1 31 0 1 822 238 379 83 0 chr15 31141728 31141897 -72353077 - MER58A DNA MER1_type -40 184 2 1 822 1278 85 0 0 chr15 31142877 31143054 -72351920 + (GGGAA)n Simple_repeat Simple_repeat 1 177 0 1 822 234 0 0 0 chr15 31143352 31143378 -72351596 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1 822 246 321 9 0 chr15 31144096 31144202 -72350772 + L1MB1 LINE L1 5835 5941 -227 1 822 235 281 56 11 chr15 31144596 31144686 -72350288 + L1MB4 LINE L1 369 462 -6145 1 822 1325 170 39 0 chr15 31144856 31145085 -72349889 + RMER6B LTR ERVK 1 238 -223 1 822 369 172 0 30 chr15 31145089 31145155 -72349819 + RMER6B LTR ERVK 397 460 -1 1 822 432 0 0 0 chr15 31145383 31145431 -72349543 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 822 502 265 0 0 chr15 31145479 31145581 -72349393 - ORR1E LTR MaLR 0 379 278 1 822 807 235 24 0 chr15 31145730 31145900 -72349074 - ORR1E LTR MaLR -185 174 1 1 822 440 302 49 6 chr15 31145951 31146114 -72348860 - MLT2D LTR ERVL -210 204 35 1 822 855 147 37 0 chr15 31147133 31147269 -72347705 + B1_Mur4 SINE Alu 3 143 -7 1 822 432 0 0 0 chr15 31147409 31147457 -72347517 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 822 3153 17 0 0 chr15 31147514 31147860 -72347114 + ORR1A0 LTR MaLR 1 346 0 1 822 230 236 125 0 chr15 31148190 31148262 -72346712 + L1MC3 LINE L1 7342 7422 -363 1 822 633 298 61 64 chr15 31149000 31149280 -72345694 - B4A SINE B4 -2 290 12 2 822 381 339 109 0 chr15 31149399 31149573 -72345401 + Charlie1b DNA MER1_type 45 237 -286 2 822 396 0 0 0 chr15 31150975 31151019 -72343955 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 822 582 15 0 0 chr15 31151019 31151085 -72343889 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 822 246 392 38 8 chr15 31151665 31151796 -72343178 + ORR1E LTR MaLR 3 137 -222 2 822 208 252 223 0 chr15 31152166 31152269 -72342705 - MIRb SINE MIR -121 147 22 2 822 207 139 0 0 chr15 31152426 31152462 -72342512 + (CCCCCT)n Simple_repeat Simple_repeat 1 36 0 2 822 216 314 38 62 chr15 31152819 31152932 -72342042 - L2a LINE L2 -54 3372 3252 2 822 236 363 55 31 chr15 31153057 31153185 -72341789 - L2a LINE L2 -319 3107 2977 2 822 878 213 91 33 chr15 31155342 31155585 -72339389 + Lx7 LINE L1 7151 7407 -289 2 822 270 0 0 0 chr15 31155590 31155620 -72339354 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 822 351 0 0 0 chr15 31155620 31155658 -72339316 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 822 318 181 0 40 chr15 31155662 31155737 -72339237 + Lx7 LINE L1 7615 7686 -10 2 822 1337 96 37 5 chr15 31156500 31156689 -72338285 + B2_Mm2 SINE B2 1 195 0 2 822 1374 41 0 16 chr15 31159546 31159978 -72334996 + (AGGTG)n Simple_repeat Simple_repeat 1 424 0 2 822 198 282 129 57 chr15 31160341 31160465 -72334509 - MIR SINE MIR -97 165 33 2 822 556 190 20 0 chr15 31161043 31161143 -72333831 - MLT1B LTR MaLR -29 361 260 2 822 27 0 0 0 chr15 31161582 31161609 -72333365 + AT_rich Low_complexity Low_complexity 1 27 0 2 822 501 324 80 91 chr15 31161979 31162342 -72332632 - ORR1E LTR MaLR 0 359 1 2 822 732 299 124 26 chr15 31163233 31163659 -72331315 - RMER5 LTR ERV1 -24 510 43 2 822 395 276 321 5 chr15 31163926 31164141 -72330833 + B4A SINE B4 1 283 -9 2 822 823 288 211 11 chr15 31164234 31164775 -72330199 + L1MB8 LINE L1 5402 6050 -128 2 822 362 315 100 7 chr15 31164989 31165139 -72329835 + B4 SINE B4 1 164 -128 2 822 352 235 99 0 chr15 31166995 31167076 -72327898 - PB1D10 SINE Alu -23 94 6 2 822 909 196 34 0 chr15 31168115 31168319 -72326655 + B3 SINE B2 2 212 -4 2 822 381 93 0 0 chr15 31168418 31168472 -72326502 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 822 361 331 55 0 chr15 31168524 31168669 -72326305 - MER63B DNA AcHobo -3 433 281 2 822 981 128 0 0 chr15 31169063 31169243 -72325731 + (GA)n Simple_repeat Simple_repeat 1 180 0 2 822 247 316 0 0 chr15 31169405 31169481 -72325493 - L1MEg LINE L1 -4622 1462 1387 2 822 413 307 79 45 chr15 31170209 31170612 -72324362 - MLT1C LTR MaLR -4 463 1 2 822 505 270 204 25 chr15 31170976 31171250 -72323724 - Charlie7 DNA MER1_type -1930 682 360 2 822 346 272 115 54 chr15 31172735 31172999 -72321975 + L1MB3 LINE L1 5787 6069 -102 2 822 552 330 122 24 chr15 31173129 31173586 -72321388 + L1MB7 LINE L1 5578 6079 -105 2 822 255 125 0 0 chr15 31175256 31175296 -72319678 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 822 654 227 21 0 chr15 31175300 31175441 -72319533 - RSINE1 SINE B4 -20 145 2 2 822 960 270 29 11 chr15 31176314 31176595 -72318379 + B4A SINE B4 2 287 -5 2 822 204 292 148 36 chr15 31178168 31178306 -72316668 - MIR SINE MIR -76 192 31 2 822 394 231 124 62 chr15 31180160 31180289 -72314685 - B3 SINE B2 -6 210 74 2 822 685 263 34 22 chr15 31180868 31181047 -72313927 - B3A SINE B2 -16 182 2 2 822 387 0 0 0 chr15 31181293 31181336 -72313638 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 822 1189 94 55 0 chr15 31181462 31181643 -72313331 - B2_Mm2 SINE B2 -3 192 2 2 822 867 157 157 0 chr15 31182832 31183017 -72311957 + B3 SINE B2 2 215 -1 2 822 342 208 25 49 chr15 31183044 31183125 -72311849 + ID4 SINE ID 3 81 -2 2 822 521 264 133 68 chr15 31184970 31185279 -72309695 - ORR1E LTR MaLR -5 354 26 2 822 255 79 0 0 chr15 31185430 31185468 -72309506 + (A)n Simple_repeat Simple_repeat 1 38 0 2 822 339 221 29 0 chr15 31186297 31186365 -72308609 + RSINE1 SINE B4 83 152 -13 2 822 378 289 80 22 chr15 31189076 31189214 -72305760 + RSINE1 SINE B4 3 148 -17 2 822 449 110 0 14 chr15 31189220 31189294 -72305680 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 822 460 0 33 0 chr15 31189629 31189689 -72305285 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 822 181 0 33 33 chr15 31191724 31191754 -72303220 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2 822 192 97 0 0 chr15 31193204 31193235 -72301739 + (CCCCCA)n Simple_repeat Simple_repeat 5 35 0 2 822 484 231 190 0 chr15 31193235 31193356 -72301618 - B3A SINE B2 -54 144 1 2 822 2568 46 6 9 chr15 31193739 31194067 -72300907 - ORR1A2 LTR MaLR 0 327 1 2 823 255 212 0 96 chr15 31197767 31197840 -72297134 - B1_Mus2 SINE Alu -81 66 1 2 823 289 213 49 0 chr15 31197780 31197841 -72297133 - ID_B1 SINE B4 -80 144 81 2 823 313 298 56 32 chr15 31198303 31198428 -72296546 - B1F SINE Alu 0 149 22 2 823 1129 115 39 0 chr15 31198473 31198655 -72296319 + B2_Mm2 SINE B2 2 190 -5 2 823 38 51 0 0 chr15 31198721 31198780 -72296194 + AT_rich Low_complexity Low_complexity 1 59 0 2 823 1278 82 43 21 chr15 31199054 31199241 -72295733 + B2_Mm2 SINE B2 3 193 -2 2 823 396 0 0 0 chr15 31199661 31199705 -72295269 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 823 272 178 135 14 chr15 31200216 31200290 -72294684 + MLT2B5 LTR ERVL 275 357 -198 2 823 346 335 128 6 chr15 31201062 31201218 -72293756 - RMER5 LTR ERV1 -11 523 349 2 823 855 299 42 35 chr15 31201220 31201504 -72293470 + B4 SINE B4 2 287 -5 2 823 560 319 70 9 chr15 31201526 31201754 -72293220 - RMER5 LTR ERV1 -207 327 86 2 823 336 24 0 0 chr15 31203088 31203129 -72291845 + (CAG)n Simple_repeat Simple_repeat 1 41 0 2 823 656 145 33 25 chr15 31204175 31204295 -72290679 - B2_Mm2 SINE B2 -58 137 17 2 823 480 261 0 0 chr15 31205168 31205283 -72289691 + PB1D10 SINE Alu 2 116 -1 2 823 870 281 71 63 chr15 31205473 31205807 -72289167 + L1MB8 LINE L1 5649 5993 -185 2 823 507 258 117 0 chr15 31205807 31205970 -72289004 + B3A SINE B2 1 182 -16 2 823 870 281 71 63 chr15 31205970 31205996 -72288978 + L1MB8 LINE L1 5994 6017 -161 2 823 288 0 0 0 chr15 31205996 31206028 -72288946 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 2 823 870 281 71 63 chr15 31206028 31206175 -72288799 + L1MB8 LINE L1 6018 6161 -17 2 823 28 0 0 0 chr15 31207593 31207621 -72287353 + AT_rich Low_complexity Low_complexity 1 28 0 2 823 329 333 9 9 chr15 31208524 31208633 -72286341 + MIRc SINE MIR 42 150 -118 2 823 293 81 26 39 chr15 31209286 31209363 -72285611 + (CAAAAA)n Simple_repeat Simple_repeat 3 78 0 2 823 321 47 0 0 chr15 31209831 31209874 -72285100 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 823 542 313 117 16 chr15 31209922 31210169 -72284805 - B4A SINE B4 -19 273 2 2 823 379 236 147 28 chr15 31210350 31210459 -72284515 - B1F2 SINE Alu -9 140 19 2 823 31 26 0 0 chr15 31210485 31210523 -72284451 + AT_rich Low_complexity Low_complexity 1 38 0 2 823 514 335 137 13 chr15 31210530 31210836 -72284138 - MLT2D LTR ERVL -68 346 3 2 823 239 211 0 101 chr15 31211384 31211463 -72283511 + MER20 DNA MER1_type 56 126 -93 2 823 477 259 196 18 chr15 31212249 31212469 -72282505 - RMER15 LTR ERVL -18 557 299 2 823 633 199 44 25 chr15 31213115 31213275 -72281699 + RSINE1 SINE B4 3 165 0 2 823 246 121 15 29 chr15 31213276 31213344 -72281630 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 823 270 308 17 0 chr15 31213670 31213790 -72281184 + (CAT)n Simple_repeat Simple_repeat 1 122 0 2 823 243 0 0 0 chr15 31215463 31215490 -72279484 + (TAATG)n Simple_repeat Simple_repeat 1 27 0 2 823 432 0 0 0 chr15 31216499 31216547 -72278427 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 823 3445 255 73 26 chr15 31217856 31218916 -72276058 + Lx7 LINE L1 6150 7258 -438 2 823 180 143 0 0 chr15 31218989 31219031 -72275943 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 2 823 320 273 48 64 chr15 31219463 31219630 -72275344 + B2_Mm2 SINE B2 1 165 -30 2 823 1386 75 0 5 chr15 31219630 31219819 -72275155 - B2_Mm2 SINE B2 -7 188 1 2 823 320 273 48 64 chr15 31219819 31219839 -72275135 + B2_Mm2 SINE B2 166 185 -10 2 823 262 242 21 21 chr15 31220256 31220349 -72274625 + (TTATA)n Simple_repeat Simple_repeat 2 94 0 2 823 607 184 249 6 chr15 31220394 31220563 -72274411 + B3 SINE B2 3 212 -4 2 823 410 233 11 0 chr15 31220649 31220739 -72274235 + 4.5SRNA scRNA scRNA 1 91 -3 2 823 512 280 16 8 chr15 31220740 31220866 -72274108 + RSINE1 SINE B4 4 130 -35 2 823 378 0 0 0 chr15 31220882 31220924 -72274050 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 823 285 29 0 0 chr15 31220924 31220957 -72274017 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 823 22 56 0 0 chr15 31220957 31220993 -72273981 + AT_rich Low_complexity Low_complexity 1 36 0 2 823 209 255 0 0 chr15 31226960 31227007 -72267967 + CT-rich Low_complexity Low_complexity 3 49 0 2 823 424 265 43 29 chr15 31227944 31228084 -72266890 + B1F2 SINE Alu 1 142 -7 2 823 294 29 0 0 chr15 31228104 31228139 -72266835 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 823 214 270 302 23 chr15 31228157 31228286 -72266688 + RSINE1 SINE B4 1 165 0 2 823 584 222 0 6 chr15 31228286 31228467 -72266507 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 823 185 233 23 0 chr15 31228511 31228554 -72266420 + L3 LINE CR1 4270 4313 -176 2 823 401 299 199 23 chr15 31228900 31229071 -72265903 + MLT2C1 LTR ERVL 1 201 -196 2 823 267 353 42 8 chr15 31229065 31229185 -72265789 + MLT2C1 LTR ERVL 425 548 -15 2 823 368 233 70 128 chr15 31230140 31230214 -72264760 - MER2 DNA MER2_type -63 282 214 3 823 859 117 255 27 chr15 31230214 31230398 -72264576 + URR1A DNA MER1_type 1 226 0 3 823 368 233 70 128 chr15 31230398 31230510 -72264464 - MER2 DNA MER2_type -132 213 107 3 823 359 233 0 0 chr15 31230605 31230665 -72264309 - ID4 SINE ID -3 80 21 3 823 346 337 96 0 chr15 31230925 31231124 -72263850 - MER20 DNA MER1_type -1 218 1 3 823 1087 244 84 30 chr15 31231298 31231560 -72263414 + B4A SINE B4 15 290 -2 3 823 310 188 12 24 chr15 31231627 31231709 -72263265 + GA-rich Low_complexity Low_complexity 4 84 0 3 823 1374 101 10 16 chr15 31231816 31232008 -72262966 - B2_Mm2 SINE B2 -3 192 2 3 823 202 267 67 0 chr15 31232759 31232819 -72262155 + L3 LINE CR1 835 898 -3591 3 823 180 0 0 0 chr15 31233269 31233289 -72261685 + (A)n Simple_repeat Simple_repeat 1 20 0 3 823 1068 57 228 6 chr15 31233298 31233456 -72261518 + B2_Mm2 SINE B2 3 195 0 3 823 464 281 87 20 chr15 31233864 31234013 -72260961 + MER20 DNA MER1_type 3 161 -58 3 823 542 315 56 0 chr15 31234396 31234539 -72260435 - ID_B1 SINE B4 -58 166 16 3 823 195 42 0 0 chr15 31234602 31234626 -72260348 + (CAA)n Simple_repeat Simple_repeat 1 24 0 3 823 333 0 0 0 chr15 31235389 31235426 -72259548 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 823 213 39 0 0 chr15 31235957 31235983 -72258991 + (CCCCCA)n Simple_repeat Simple_repeat 1 26 0 3 823 306 0 0 0 chr15 31236930 31236964 -72258010 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 823 410 267 86 8 chr15 31237674 31237791 -72257183 + ID_B1 SINE B4 99 224 0 3 823 399 95 40 0 chr15 31237792 31237866 -72257108 + (CAAG)n Simple_repeat Simple_repeat 3 79 0 3 823 1056 89 0 20 chr15 31238014 31238163 -72256811 + B1_Mus2 SINE Alu 2 147 0 3 823 619 263 112 11 chr15 31238195 31238464 -72256510 + L1MC3 LINE L1 7277 7572 -213 3 823 528 289 0 40 chr15 31238466 31238614 -72256360 + B1F2 SINE Alu 2 143 -6 3 823 189 0 0 0 chr15 31238731 31238752 -72256222 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 3 823 925 91 0 0 chr15 31238752 31238873 -72256101 - B1_Mm SINE Alu -26 121 1 3 823 1707 194 56 8 chr15 31238873 31239230 -72255744 + MTD LTR MaLR 46 419 0 3 823 328 304 75 6 chr15 31239231 31239390 -72255584 + L1MC3 LINE L1 7616 7785 0 3 823 1074 180 358 61 chr15 31239653 31239995 -72254979 + RLTR20C LTR ERVK 1 446 -105 3 823 432 0 0 0 chr15 31239995 31240043 -72254931 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 823 669 213 6 72 chr15 31240043 31240153 -72254821 + RLTR20C LTR ERVK 447 547 -4 3 823 272 293 0 0 chr15 31240305 31240380 -72254594 + (TG)n Simple_repeat Simple_repeat 1 75 0 3 823 1093 247 110 8 chr15 31240404 31240649 -72254325 - B4A SINE B4 -21 271 2 3 823 3352 70 18 2 chr15 31240841 31241286 -72253688 + RLTR13D1 LTR ERVK 350 801 -5 3 823 610 278 35 65 chr15 31242010 31242210 -72252764 + B3A SINE B2 1 194 -4 3 823 3992 174 96 62 chr15 31242892 31243892 -72251082 + RLTR22_Mur LTR ERVK 1 1034 -814 3 823 1364 62 0 86 chr15 31243971 31244181 -72250793 - B2_Mm2 SINE B2 -1 194 3 3 823 288 164 0 0 chr15 31244194 31244261 -72250713 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 823 1016 158 117 15 chr15 31244339 31244544 -72250430 - URR1A DNA MER1_type 0 226 1 3 823 419 299 103 18 chr15 31244639 31244862 -72250112 - L1MA4 LINE L1 -265 5915 5674 3 823 1120 139 43 5 chr15 31245322 31245510 -72249464 + URR1A DNA MER1_type 20 214 -12 3 823 311 203 14 0 chr15 31245689 31245763 -72249211 + GA-rich Low_complexity Low_complexity 3 77 0 3 823 366 23 0 0 chr15 31246059 31246102 -72248872 + (TC)n Simple_repeat Simple_repeat 1 43 0 3 823 705 12 0 0 chr15 31246102 31246183 -72248791 + (CA)n Simple_repeat Simple_repeat 1 82 0 3 823 368 190 16 4 chr15 31246229 31246303 -72248671 + B3A SINE B2 7 79 -114 3 823 1385 188 45 110 chr15 31246357 31246758 -72248216 - MTE2a LTR MaLR 0 379 5 3 823 685 162 21 31 chr15 31246918 31247097 -72247877 + ORR1D1 LTR MaLR 1 166 -218 3 823 241 180 0 0 chr15 31247181 31247231 -72247743 + MTEa LTR MaLR 55 104 -263 3 823 362 238 46 37 chr15 31247215 31247324 -72247650 + MTEa LTR MaLR 40 149 -225 3 823 226 247 72 72 chr15 31247967 31248050 -72246924 + ID2 SINE ID 1 83 0 3 823 275 351 9 9 chr15 31248395 31248507 -72246467 + Charlie12 DNA MER1_type 18 129 -2744 3 823 345 319 0 0 chr15 31248404 31248495 -72246479 - RMER30 DNA MER1_type -27 175 85 3 823 358 193 0 0 chr15 31248954 31249011 -72245963 - RMER30 DNA MER1_type -141 61 5 3 823 271 276 0 0 chr15 31250013 31250071 -72244903 + MTEa LTR MaLR 4 61 -318 3 823 876 129 85 34 chr15 31250085 31250261 -72244713 + RMER19C LTR ERVK 1 185 -426 3 823 381 179 73 10 chr15 31250261 31250357 -72244617 + MTEa LTR MaLR 276 377 -2 3 823 376 210 211 70 chr15 31250763 31250802 -72244172 - B3 SINE B2 0 216 185 3 823 527 0 16 0 chr15 31250802 31250865 -72244109 + (TC)n Simple_repeat Simple_repeat 2 65 0 3 823 186 43 0 0 chr15 31250865 31250887 -72244087 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 823 376 210 211 70 chr15 31250887 31250974 -72244000 - B3 SINE B2 -32 184 72 3 823 287 284 12 12 chr15 31251076 31251158 -72243816 + G-rich Low_complexity Low_complexity 3 84 0 3 823 1115 255 12 120 chr15 31252090 31252514 -72242460 + MTE2a LTR MaLR 2 379 0 3 823 2471 133 56 34 chr15 31252903 31253315 -72241659 + MTC LTR MaLR 1 421 0 3 823 744 277 24 111 chr15 31253426 31253519 -72241455 - MER2 DNA MER2_type -2 343 263 3 823 1049 191 34 10 chr15 31253519 31253725 -72241249 + B3 SINE B2 1 211 -5 3 823 744 277 24 111 chr15 31253725 31253919 -72241055 - MER2 DNA MER2_type -83 262 81 3 823 271 272 63 11 chr15 31253928 31254029 -72240945 - BC1_Mm scRNA scRNA -44 108 1 3 823 2159 78 59 43 chr15 31255088 31255410 -72239564 + ORR1A2 LTR MaLR 1 327 0 3 823 225 0 0 0 chr15 31255552 31255577 -72239397 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 823 184 236 163 47 chr15 31255718 31255847 -72239127 - L2b LINE L2 -282 3093 2950 3 823 307 269 198 25 chr15 31255934 31256136 -72238838 - L2b LINE L2 -706 2713 2477 3 823 366 275 53 63 chr15 31256254 31256271 -72238703 + L1M2 LINE L1 5470 5479 -821 3 823 790 200 0 13 chr15 31256271 31256423 -72238551 + B1_Mur4 SINE Alu 1 150 0 3 823 403 276 53 60 chr15 31256423 31256606 -72238368 + L1M2 LINE L1 5480 5668 -632 3 823 252 0 0 0 chr15 31257442 31257470 -72237504 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 823 879 321 94 21 chr15 31257579 31257919 -72237055 + MLT1A0 LTR MaLR 1 365 0 3 823 458 278 17 0 chr15 31258138 31258253 -72236721 + PB1D10 SINE Alu 1 117 0 3 823 2389 162 65 30 chr15 31258319 31258828 -72236146 + RLTR11A2 LTR ERVK 1 527 0 3 823 751 260 144 16 chr15 31259919 31260224 -72234750 + Lx8 LINE L1 7130 7473 0 3 823 338 335 119 12 chr15 31260297 31260457 -72234517 - L1MD LINE L1 -919 5440 5264 3 823 485 265 116 21 chr15 31260462 31260651 -72234323 - MER33 DNA MER1_type 0 324 118 3 823 799 204 6 24 chr15 31260750 31260916 -72234058 + RSINE1 SINE B4 3 165 0 3 823 255 61 0 0 chr15 31260927 31260960 -72234014 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 823 318 308 82 27 chr15 31261009 31261119 -72233855 + PB1D10 SINE Alu 2 117 0 3 823 974 158 21 16 chr15 31261132 31261318 -72233656 + B2_Mm2 SINE B2 2 188 -7 3 823 235 273 119 123 chr15 31261685 31261936 -72233038 + MLT1A0 LTR MaLR 116 365 0 3 823 855 267 144 47 chr15 31262247 31262546 -72232428 + MTEa-int LTR MaLR 1019 1346 -234 3 823 875 259 56 22 chr15 31262547 31262815 -72232159 - ORR1E LTR MaLR 0 359 83 3 823 760 157 33 0 chr15 31262868 31262989 -72231985 + B1_Mur1 SINE Alu 20 144 -5 3 823 1038 156 11 22 chr15 31263079 31263262 -72231712 + URR1B DNA MER1_type 40 220 -5 3 823 784 280 34 8 chr15 31263299 31263533 -72231441 + MTEa-int LTR MaLR 1336 1575 -5 3 823 802 291 75 100 chr15 31263538 31263590 -72231384 + MTEa LTR MaLR 1 52 -327 3 823 1485 130 5 5 chr15 31263590 31263814 -72231160 - URR1B DNA MER1_type -1 224 1 3 823 802 291 75 100 chr15 31263814 31264150 -72230824 + MTEa LTR MaLR 53 379 0 3 823 1615 38 0 0 chr15 31264504 31264688 -72230286 - B2_Mm1t SINE B2 -8 185 2 3 823 558 275 129 19 chr15 31265321 31265577 -72229397 - B4A SINE B4 -8 284 1 3 823 397 272 31 16 chr15 31265751 31265878 -72229096 + MER5A1 DNA MER1_type 5 133 -33 3 823 429 20 0 0 chr15 31266552 31266602 -72228372 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 823 922 261 90 20 chr15 31267199 31267554 -72227420 + L1ME2 LINE L1 5380 5759 -405 3 823 837 0 0 0 chr15 31267603 31267696 -72227278 + (GGGGA)n Simple_repeat Simple_repeat 2 94 0 3 823 668 312 56 21 chr15 31267863 31268148 -72226826 + L1MB4 LINE L1 5612 5906 -274 3 823 902 260 99 49 chr15 31268215 31268539 -72226435 - ORR1D2 LTR MaLR -27 343 4 3 823 287 282 98 29 chr15 31268699 31268941 -72226033 + L1MB4 LINE L1 5916 6181 -2 3 823 254 266 51 0 chr15 31269030 31269109 -72225865 + B3A SINE B2 2 84 -114 3 823 324 0 0 0 chr15 31269148 31269184 -72225790 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 823 956 86 55 41 chr15 31269204 31269350 -72225624 - B1_Mus1 SINE Alu 0 148 1 3 823 337 372 79 22 chr15 31269413 31269641 -72225333 + L1ME2 LINE L1 5845 6085 -79 3 823 964 269 25 25 chr15 31269972 31270242 -72224732 - B4 SINE B4 -8 284 11 3 823 225 261 55 33 chr15 31271331 31271399 -72223575 + Charlie2b DNA MER1_type 1240 1309 -1473 3 823 255 304 45 15 chr15 31271399 31271507 -72223467 + PB1D7 SINE Alu 1 112 -8 3 823 245 349 149 34 chr15 31271625 31271800 -72223174 + MLT1C LTR MaLR 202 396 -71 3 823 366 61 0 0 chr15 31273171 31273220 -72221754 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 823 266 234 510 0 chr15 31273602 31273700 -72221274 + RSINE1 SINE B4 16 163 -2 3 823 337 216 216 0 chr15 31274526 31274614 -72220360 + PB1D7 SINE Alu 5 111 -9 3 823 360 150 0 0 chr15 31274615 31274695 -72220279 + (CACG)n Simple_repeat Simple_repeat 2 81 0 3 823 413 293 98 0 chr15 31275344 31275477 -72219497 + B1F SINE Alu 3 148 -1 3 823 406 289 0 10 chr15 31275530 31275628 -72219346 + RSINE1 SINE B4 28 124 -41 3 823 420 20 0 0 chr15 31275628 31275677 -72219297 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 823 428 191 90 0 chr15 31276539 31276628 -72218346 + B1F2 SINE Alu 53 149 0 4 823 245 98 24 0 chr15 31276643 31276684 -72218290 + (GA)n Simple_repeat Simple_repeat 2 43 0 4 823 1042 72 12 18 chr15 31276684 31276853 -72218121 + (GAGAA)n Simple_repeat Simple_repeat 5 172 0 4 823 801 179 7 7 chr15 31276964 31277110 -72217864 + RMER19B LTR ERVK 757 902 0 4 823 536 274 72 45 chr15 31277170 31277460 -72217514 + L1MA6 LINE L1 5998 6295 -5 4 823 261 236 97 0 chr15 31277689 31277761 -72217213 - MER54A LTR ERVL -374 527 449 4 823 750 53 0 0 chr15 31278141 31278236 -72216738 - B2_Mm2 SINE B2 -45 150 56 4 823 1382 77 16 0 chr15 31278560 31278742 -72216232 + B2_Mm2 SINE B2 3 187 -8 4 823 252 0 0 0 chr15 31279208 31279236 -72215738 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 823 396 0 0 0 chr15 31279803 31279847 -72215127 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 823 297 155 0 0 chr15 31280374 31280432 -72214542 + CT-rich Low_complexity Low_complexity 1 58 0 4 823 393 171 0 0 chr15 31280431 31280519 -72214455 + (CA)n Simple_repeat Simple_repeat 1 88 0 4 823 647 193 0 82 chr15 31280852 31280999 -72213975 + B1_Mur2 SINE Alu 2 136 -13 4 823 204 83 0 53 chr15 31280999 31281037 -72213937 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 4 823 475 341 42 37 chr15 31281362 31281578 -72213396 + MER20 DNA MER1_type 2 218 -1 4 823 257 352 111 19 chr15 31281594 31281756 -72213218 + Tigger5 DNA MER2_type 3 179 -2227 4 823 508 316 0 0 chr15 31282013 31282127 -72212847 + PB1D10 SINE Alu 3 116 -1 4 823 634 208 15 29 chr15 31282426 31282571 -72212403 - MLT2C2 LTR ERVL -5 558 414 4 823 244 203 58 77 chr15 31282667 31282793 -72212181 - B4A SINE B4 0 292 145 4 823 781 255 134 8 chr15 31283159 31283246 -72211728 + B4A SINE B4 2 102 -190 4 823 306 0 0 0 chr15 31283246 31283280 -72211694 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 823 781 255 134 8 chr15 31283280 31283445 -72211529 + B4A SINE B4 103 285 -7 4 823 198 150 0 0 chr15 31283454 31283494 -72211480 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 823 3073 40 5 241 chr15 31284362 31284984 -72209990 - IAPLTR2_Mm LTR ERVK 0 475 1 4 823 290 276 12 84 chr15 31284984 31285067 -72209907 - ID_B1 SINE B4 -62 162 86 4 823 210 171 0 0 chr15 31285102 31285137 -72209837 + T-rich Low_complexity Low_complexity 1 35 0 4 823 532 186 60 26 chr15 31285137 31285253 -72209721 - PB1D7 SINE Alu 0 120 1 4 823 454 257 55 0 chr15 31285529 31285638 -72209336 + RSINE1 SINE B4 18 132 -33 4 823 312 27 0 0 chr15 31285669 31285706 -72209268 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 4 823 1194 28 42 0 chr15 31285777 31285921 -72209053 + B1_Mur4 SINE Alu 1 150 0 4 823 213 39 0 0 chr15 31285921 31285947 -72209027 + (A)n Simple_repeat Simple_repeat 1 26 0 4 823 235 146 0 0 chr15 31285963 31286004 -72208970 + Lx7 LINE L1 6998 7038 -658 4 823 246 273 80 0 chr15 31286945 31287033 -72207941 - L1MD2 LINE L1 -130 6229 6135 4 823 500 239 0 7 chr15 31287033 31287176 -72207798 + (TG)n Simple_repeat Simple_repeat 2 143 0 4 823 209 378 14 14 chr15 31287287 31287432 -72207542 + (CATG)n Simple_repeat Simple_repeat 2 146 0 4 823 441 50 0 0 chr15 31287719 31287779 -72207195 + (TTCC)n Simple_repeat Simple_repeat 4 63 0 4 823 258 32 0 0 chr15 31287791 31287822 -72207152 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 4 823 1193 55 7 0 chr15 31287822 31287968 -72207006 - B1_Mus2 SINE Alu 0 147 1 4 823 462 259 0 25 chr15 31287985 31288104 -72206870 - PB1D10 SINE Alu -1 116 1 4 823 284 323 0 0 chr15 31288118 31288183 -72206791 + ID4 SINE ID 15 79 -4 4 823 1324 27 0 0 chr15 31288667 31288815 -72206159 + B1_Mus1 SINE Alu 1 148 0 4 823 865 243 16 5 chr15 31288891 31289081 -72205893 - B3A SINE B2 -6 192 1 4 823 339 25 0 0 chr15 31289898 31289938 -72205036 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 823 1226 258 91 21 chr15 31290152 31290706 -72204268 + L1_Rod LINE L1 4626 5237 -643 4 823 260 297 159 109 chr15 31290855 31291131 -72203843 + ORR1E LTR MaLR 11 300 -59 4 823 434 284 6 57 chr15 31291135 31291292 -72203682 - RSINE1 SINE B4 -15 150 2 4 823 298 250 205 16 chr15 31291644 31291766 -72203208 + MLT1H LTR MaLR 3 147 -402 4 823 265 375 71 0 chr15 31292027 31292139 -72202835 + ORR1E LTR MaLR 1 120 -239 4 823 957 155 0 33 chr15 31292332 31292485 -72202489 + B1_Mur3 SINE Alu 2 149 0 4 823 568 257 57 127 chr15 31292777 31293022 -72201952 + B4A SINE B4 5 232 -60 4 823 279 0 0 0 chr15 31293056 31293087 -72201887 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 823 1229 121 68 55 chr15 31294014 31294233 -72200741 - URR1A DNA MER1_type -4 222 1 4 823 213 196 53 18 chr15 31294382 31294439 -72200535 + L2 LINE L2 3021 3079 -340 4 823 377 20 20 0 chr15 31294491 31294541 -72200433 + (CCCCCA)n Simple_repeat Simple_repeat 3 53 0 4 823 240 300 24 24 chr15 31294579 31294661 -72200313 - L2a LINE L2 -253 3173 3092 4 823 414 0 0 0 chr15 31296493 31296539 -72198435 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 823 923 97 20 40 chr15 31298606 31298756 -72196218 + B1_Mus1 SINE Alu 1 147 -1 4 823 183 80 0 0 chr15 31299473 31299498 -72195476 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 4 823 224 214 259 35 chr15 31299543 31299659 -72195315 + B1F2 SINE Alu 1 142 -7 4 823 296 238 184 19 chr15 31299559 31299662 -72195312 + ID_B1 SINE B4 101 220 -4 4 823 629 225 30 37 chr15 31300107 31300241 -72194733 + RSINE1 SINE B4 4 136 -29 4 823 402 21 0 0 chr15 31300249 31300296 -72194678 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 823 413 294 0 53 chr15 31300381 31300514 -72194460 + B3A SINE B2 73 198 0 4 823 1012 228 14 29 chr15 31300529 31300737 -72194237 + B3 SINE B2 9 213 -3 4 823 2677 119 140 11 chr15 31300860 31301318 -72193656 + RMER15 LTR ERVL 59 575 0 4 823 859 243 6 6 chr15 31301318 31301492 -72193482 - B3A SINE B2 -24 174 1 4 823 316 269 8 111 chr15 31301700 31301715 -72193259 + MT2B LTR ERVL 152 154 -447 4 823 609 175 0 143 chr15 31301715 31301855 -72193119 + B1_Mur3 SINE Alu 1 120 -29 4 823 3644 128 52 34 chr15 31301913 31302796 -72192178 - RMER17B LTR ERVK 0 906 1 4 823 214 298 23 23 chr15 31303278 31303364 -72191610 - L2a LINE L2 -250 3176 3091 4 823 627 311 103 59 chr15 31303796 31303947 -72191027 + LTR73 LTR ERV1 3 159 -413 4 823 1345 101 11 0 chr15 31303947 31304135 -72190839 - B2_Mm1t SINE B2 -3 190 1 4 823 627 311 103 59 chr15 31304135 31304372 -72190602 + LTR73 LTR ERV1 160 408 -164 4 823 390 256 0 23 chr15 31304331 31304419 -72190555 - B1F SINE Alu -63 86 1 4 823 2218 115 3 0 chr15 31305729 31306042 -72188932 - ORR1A2 LTR MaLR 0 327 14 4 823 210 300 14 0 chr15 31306207 31306277 -72188697 + (CA)n Simple_repeat Simple_repeat 1 71 0 4 823 605 291 37 19 chr15 31307026 31307187 -72187787 - ID_B1 SINE B4 -9 215 52 4 823 195 175 49 24 chr15 31307580 31307621 -72187353 - MIRm SINE MIR -10 266 225 4 823 493 212 29 139 chr15 31307665 31307797 -72187177 + MTD LTR MaLR 246 419 0 4 823 280 277 99 0 chr15 31308702 31308803 -72186171 - Tigger5 DNA MER2_type -2225 181 71 4 823 307 319 26 34 chr15 31309368 31309485 -72185489 - ID_B1 SINE B4 -28 196 81 4 823 504 0 0 0 chr15 31310279 31310335 -72184639 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 823 313 145 48 0 chr15 31310352 31310435 -72184539 + (CAGAGA)n Simple_repeat Simple_repeat 6 92 0 4 823 315 281 140 7 chr15 31310970 31311106 -72183868 + HAL1-3A_ME LINE L1 2285 2438 -420 4 823 435 19 0 0 chr15 31311133 31311185 -72183789 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 823 1344 84 5 21 chr15 31312341 31312535 -72182439 + B2_Mm2 SINE B2 2 192 -3 4 823 1024 138 6 0 chr15 31312800 31312960 -72182014 + L1VL2 LINE L1 199 359 -5976 4 823 13860 64 9 8 chr15 31312947 31313926 -72181048 + L1VL2 LINE L1 615 1602 -2013 4 823 3377 43 2 2 chr15 31313926 31314322 -72180652 + MTA_Mm LTR MaLR 1 396 0 4 823 13860 77 16 5 chr15 31314322 31315697 -72179277 + L1VL2 LINE L1 1603 2988 -627 4 823 279 239 65 16 chr15 31315892 31315994 -72178980 - PB1D10 SINE Alu -10 139 29 4 823 225 0 0 0 chr15 31315994 31316019 -72178955 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 823 279 227 40 13 chr15 31316019 31316030 -72178944 - PB1D10 SINE Alu -89 28 16 4 823 3912 255 65 32 chr15 31316422 31317779 -72177195 + Lx7 LINE L1 5916 7335 -361 4 823 827 238 42 5 chr15 31317862 31318052 -72176922 - B3A SINE B2 -1 197 1 4 823 744 255 6 13 chr15 31318099 31318258 -72176716 - RSINE1 SINE B4 -2 163 6 4 823 909 228 12 101 chr15 31318415 31318664 -72176310 - B4 SINE B4 -1 291 81 4 823 452 307 29 29 chr15 31318708 31318946 -72176028 - L1MC3 LINE L1 -243 7542 7305 4 823 580 239 0 90 chr15 31319456 31319658 -72175316 - B3A SINE B2 -4 194 12 4 823 331 213 48 29 chr15 31319792 31319922 -72175052 + L1MA4 LINE L1 5831 5962 -218 4 823 1080 240 10 0 chr15 31320129 31320337 -72174637 + B3 SINE B2 7 216 0 4 823 23 54 0 0 chr15 31320337 31320374 -72174600 + AT_rich Low_complexity Low_complexity 1 37 0 4 823 464 190 0 12 chr15 31320382 31320467 -72174507 + B1F SINE Alu 65 148 -1 4 823 1602 237 83 34 chr15 31320754 31321222 -72173752 + RLTR11A LTR ERVK 1 491 -37 4 823 269 204 45 8 chr15 31322269 31322402 -72172572 + (TA)n Simple_repeat Simple_repeat 1 138 0 5 823 387 0 0 0 chr15 31322941 31322984 -72171990 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 823 246 222 0 16 chr15 31323151 31323215 -72171759 + GA-rich Low_complexity Low_complexity 1 63 0 5 823 740 201 77 35 chr15 31323710 31323880 -72171094 + B3A SINE B2 7 183 -15 5 823 577 279 49 10 chr15 31324322 31324525 -72170449 + MER33 DNA MER1_type 1 211 -113 5 823 1331 235 133 24 chr15 31324574 31324905 -72170069 + MTE2b LTR MaLR 10 376 -3 5 823 354 45 0 0 chr15 31324905 31324949 -72170025 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 823 339 314 0 6 chr15 31325021 31325129 -72169845 - ID4 SINE ID -40 112 7 5 823 513 105 0 0 chr15 31326025 31326111 -72168863 + (CA)n Simple_repeat Simple_repeat 1 86 0 5 824 372 22 0 0 chr15 31326503 31326548 -72168426 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 824 608 234 184 5 chr15 31327023 31327208 -72167766 + ID_B1 SINE B4 3 220 -4 5 824 991 127 121 0 chr15 31327215 31327388 -72167586 + B2_Mm2 SINE B2 1 194 -1 5 824 1018 127 0 13 chr15 31328098 31328250 -72166724 - B1_Mur4 SINE Alu 0 150 1 5 824 853 112 0 46 chr15 31328290 31328421 -72166553 - B1_Mus1 SINE Alu -23 125 1 5 824 329 208 51 25 chr15 31329562 31329641 -72165333 - PB1D7 SINE Alu -35 85 5 5 824 315 0 0 0 chr15 31330546 31330581 -72164393 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 5 824 576 252 29 51 chr15 31330588 31330675 -72164299 - RSINE1 SINE B4 -20 145 55 5 824 2110 138 128 8 chr15 31330675 31331026 -72163948 - ORR1B1 LTR MaLR -1 393 1 5 824 576 252 29 51 chr15 31331026 31331076 -72163898 - RSINE1 SINE B4 -111 54 11 5 824 227 103 26 0 chr15 31331305 31331344 -72163630 + (TTG)n Simple_repeat Simple_repeat 3 42 0 5 824 247 271 70 14 chr15 31333689 31333760 -72161214 - MLT1G1 LTR MaLR -346 233 159 5 824 252 59 0 0 chr15 31333794 31333828 -72161146 + (TCCC)n Simple_repeat Simple_repeat 2 35 0 5 824 828 276 60 0 chr15 31333848 31334047 -72160927 - ID_B1 SINE B4 -3 221 11 5 824 257 282 227 8 chr15 31334061 31334193 -72160781 - RSINE1 SINE B4 0 165 5 5 824 395 250 102 24 chr15 31334634 31334761 -72160213 + MLT1A0 LTR MaLR 229 365 0 5 824 398 315 0 16 chr15 31334967 31335096 -72159878 + RSINE1 SINE B4 37 163 -2 5 824 808 209 105 21 chr15 31335517 31335708 -72159266 - B3 SINE B2 -9 207 1 5 824 475 216 90 4 chr15 31335897 31336026 -72158948 - B1F1 SINE Alu -11 138 3 5 824 303 244 99 16 chr15 31336036 31336157 -72158817 - L1M4 LINE L1 -813 5333 5203 5 824 374 305 156 39 chr15 31336243 31336499 -72158475 - L1M4 LINE L1 -1190 4956 4671 5 824 384 22 0 0 chr15 31336563 31336608 -72158366 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 824 779 263 40 93 chr15 31336635 31336937 -72158037 - B4A SINE B4 -6 286 1 5 824 430 139 14 0 chr15 31337062 31337134 -72157840 - B1_Mus2 SINE Alu -1 146 74 5 824 897 287 118 42 chr15 31337778 31337926 -72157048 - RMER5 LTR ERV1 -29 505 354 5 824 1112 72 167 12 chr15 31337926 31338094 -72156880 + B2_Mm2 SINE B2 2 195 0 5 824 897 287 118 42 chr15 31338094 31338126 -72156848 - RMER5 LTR ERV1 -181 353 326 5 824 189 0 0 0 chr15 31338126 31338147 -72156827 + (CAG)n Simple_repeat Simple_repeat 1 21 0 5 824 897 287 118 42 chr15 31338147 31338398 -72156576 - RMER5 LTR ERV1 -209 325 41 5 824 180 239 179 114 chr15 31338861 31338984 -72155990 - L2a LINE L2 -3 3423 3293 5 824 268 377 47 9 chr15 31339102 31339209 -72155765 + MLT1C LTR MaLR 349 459 -8 5 824 304 290 103 16 chr15 31339555 31339681 -72155293 - HAL1-3A_ME LINE L1 -440 2418 2282 5 824 1274 249 49 24 chr15 31340074 31340451 -72154523 - MTD LTR MaLR -44 363 3 5 824 540 129 0 0 chr15 31340468 31340569 -72154405 + (TG)n Simple_repeat Simple_repeat 2 102 0 5 824 258 284 14 0 chr15 31341029 31341103 -72153871 - MLT1C LTR MaLR -148 319 245 5 824 410 304 35 35 chr15 31341149 31341292 -72153682 - MLT1C LTR MaLR -322 145 3 5 824 294 199 165 6 chr15 31341297 31341372 -72153602 + PB1D10 SINE Alu 9 92 -28 5 824 216 0 0 0 chr15 31341706 31341730 -72153244 + (TTA)n Simple_repeat Simple_repeat 2 25 0 5 824 549 241 18 0 chr15 31341760 31341872 -72153102 - B1F2 SINE Alu -18 131 18 5 824 248 211 58 0 chr15 31342311 31342363 -72152611 + MER53 DNA hAT 138 192 -1 5 824 434 275 40 64 chr15 31342435 31342713 -72152261 + MLT1B LTR MaLR 71 378 -12 5 824 237 239 30 0 chr15 31342836 31342903 -72152071 + CT-rich Low_complexity Low_complexity 3 71 0 5 824 262 267 82 30 chr15 31343180 31343315 -72151659 + RMER12 LTR ERVK 695 836 -486 5 824 292 278 131 59 chr15 31343350 31343413 -72151561 - RSINE1 SINE B4 0 165 2 5 824 552 178 11 0 chr15 31343413 31343503 -72151471 - B3A SINE B2 -107 91 1 5 824 519 17 0 0 chr15 31343648 31343708 -72151266 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 824 577 215 195 0 chr15 31343708 31343857 -72151117 + ORR1D1 LTR MaLR 196 373 -1 5 824 319 200 0 30 chr15 31344712 31344779 -72150195 + tRNA-Ala-GCY_ tRNA tRNA 1 65 -10 5 824 314 45 23 0 chr15 31344805 31344849 -72150125 + (GA)n Simple_repeat Simple_repeat 1 45 0 5 824 367 260 0 0 chr15 31344874 31344947 -72150027 + ID4 SINE ID 1 73 -10 5 824 230 304 65 11 chr15 31345620 31345713 -72149261 - MLT1C LTR MaLR -6 461 364 5 824 201 74 0 0 chr15 31345755 31345782 -72149192 + (CTAA)n Simple_repeat Simple_repeat 3 29 0 5 824 397 191 0 14 chr15 31345782 31345845 -72149129 - RLTR40 LTR ERVK -393 424 362 5 824 2377 138 58 15 chr15 31345845 31346241 -72148733 + MTC LTR MaLR 1 413 -8 5 824 1792 178 80 34 chr15 31346245 31346595 -72148379 - RLTR40 LTR ERVK -451 366 1 5 824 589 202 62 129 chr15 31348874 31349084 -72145890 + B3A SINE B2 3 198 0 5 824 285 98 0 0 chr15 31349085 31349126 -72145848 + (GAA)n Simple_repeat Simple_repeat 2 42 0 5 824 1428 84 5 10 chr15 31349256 31349449 -72145525 - B2_Mm2 SINE B2 -2 193 2 5 824 22 56 0 0 chr15 31349536 31349572 -72145402 + AT_rich Low_complexity Low_complexity 1 36 0 5 824 212 231 21 21 chr15 31349607 31349673 -72145301 + (TAA)n Simple_repeat Simple_repeat 2 67 0 5 824 1021 137 7 0 chr15 31349673 31349819 -72145155 + B1_Mur4 SINE Alu 1 147 -3 5 824 212 231 21 21 chr15 31349819 31349845 -72145129 + (TAA)n Simple_repeat Simple_repeat 2 27 0 5 824 439 287 28 7 chr15 31349853 31349997 -72144977 + L1MA6 LINE L1 4662 4808 -1335 5 824 268 213 25 18 chr15 31349995 31350075 -72144899 - L1_Rod LINE L1 -697 5427 5296 5 824 993 266 95 44 chr15 31350276 31350751 -72144223 + L1MA6 LINE L1 5438 5936 -364 5 824 646 302 39 5 chr15 31350929 31351132 -72143842 - ORR1D2 LTR MaLR -160 210 1 5 824 779 239 19 0 chr15 31351306 31351465 -72143509 - RSINE1 SINE B4 -2 163 2 5 824 303 0 42 21 chr15 31351616 31351664 -72143310 + (CAAA)n Simple_repeat Simple_repeat 3 51 0 5 824 244 269 162 31 chr15 31351878 31352014 -72142960 + ORR1E LTR MaLR 215 357 -2 5 824 285 239 59 50 chr15 31352142 31352261 -72142713 - MTD LTR MaLR -299 120 1 5 824 1693 31 0 0 chr15 31353138 31353331 -72141643 - B2_Mm1t SINE B2 0 193 1 5 824 238 258 53 75 chr15 31353540 31353766 -72141208 - Lx9 LINE L1 -5 7639 7419 5 824 369 246 240 22 chr15 31353767 31353950 -72141024 - Lx9 LINE L1 -136 7508 7286 5 824 575 227 204 5 chr15 31353975 31354161 -72140813 - ID_B1 SINE B4 -1 223 1 5 824 352 298 91 0 chr15 31354715 31354836 -72140138 + RSINE1 SINE B4 5 136 -29 5 824 311 240 59 81 chr15 31354873 31354886 -72140088 + B4 SINE B4 72 105 -187 5 824 458 222 0 0 chr15 31354886 31354976 -72139998 + B1_Mur3 SINE Alu 1 90 -59 5 824 311 240 59 81 chr15 31354976 31355009 -72139965 + B4 SINE B4 106 204 -88 5 824 278 216 0 0 chr15 31355383 31355434 -72139540 + B1_Mur1 SINE Alu 85 135 -14 5 824 591 15 0 0 chr15 31355434 31355502 -72139472 + (GA)n Simple_repeat Simple_repeat 1 68 0 5 824 436 364 34 6 chr15 31355679 31355856 -72139118 + MLT1C LTR MaLR 202 383 -84 5 824 312 316 94 0 chr15 31355982 31356099 -72138875 + MER58B DNA MER1_type 195 322 -19 5 824 698 261 44 15 chr15 31356861 31357067 -72137907 - B3 SINE B2 0 216 5 5 824 1255 57 0 17 chr15 31357076 31357255 -72137719 + (TTTC)n Simple_repeat Simple_repeat 4 179 0 5 824 661 168 158 14 chr15 31357255 31357394 -72137580 - B2_Mm2 SINE B2 -36 159 1 5 824 318 384 47 16 chr15 31357530 31357723 -72137251 + MIR SINE MIR 28 226 -36 5 824 1197 106 12 0 chr15 31357798 31357968 -72137006 + B2_Mm1t SINE B2 1 172 -21 5 824 211 191 24 0 chr15 31357986 31358028 -72136946 + B4 SINE B4 41 83 -209 5 824 425 81 316 9 chr15 31357991 31358105 -72136869 + B2_Mm2 SINE B2 47 195 0 5 824 580 262 82 16 chr15 31359323 31359505 -72135469 - LTR41 LTR ERVL 0 768 575 5 824 391 304 27 0 chr15 31359587 31359699 -72135275 - LTR41 LTR ERVL -332 436 322 5 824 249 326 55 22 chr15 31360003 31360094 -72134880 + MLT1A0 LTR MaLR 272 365 0 5 824 1051 241 101 9 chr15 31360580 31360907 -72134067 + ORSL-2b DNA Tip100 4 360 -148 5 824 1113 81 0 22 chr15 31361058 31361236 -72133738 + (TAGA)n Simple_repeat Simple_repeat 3 176 0 5 824 292 194 43 43 chr15 31361576 31361646 -72133328 + PB1D10 SINE Alu 47 116 -1 5 824 836 304 35 23 chr15 31361646 31361905 -72133069 + B4A SINE B4 2 263 -29 5 824 483 100 0 0 chr15 31361936 31362006 -72132968 + (CA)n Simple_repeat Simple_repeat 1 70 0 5 824 250 264 0 99 chr15 31362079 31362180 -72132794 - MLT1A1 LTR MaLR 0 408 318 5 824 2385 210 62 4 chr15 31362290 31362772 -72132202 + RLTR18B LTR ERVK 3 512 0 5 824 648 255 24 87 chr15 31362930 31363136 -72131838 - B3A SINE B2 0 198 6 5 824 840 281 84 75 chr15 31363992 31364582 -72130392 - RMER13A LTR ERVK -224 734 1 6 824 849 20 0 0 chr15 31364889 31364988 -72129986 + (TTTC)n Simple_repeat Simple_repeat 4 102 0 6 824 923 130 13 25 chr15 31364989 31365226 -72129748 + CT-rich Low_complexity Low_complexity 1 233 0 6 824 477 287 73 28 chr15 31365455 31365634 -72129340 + MLT1B LTR MaLR 1 187 -203 6 824 316 257 78 91 chr15 31365649 31365803 -72129171 + RMER15 LTR ERVL 8 159 -416 6 824 437 272 27 65 chr15 31365828 31366013 -72128961 + RMER15 LTR ERVL 384 561 -14 6 824 499 172 212 0 chr15 31366268 31366367 -72128607 - PB1D9 SINE Alu 0 120 1 6 824 1299 97 37 16 chr15 31366386 31366575 -72128399 - B2_Mm2 SINE B2 -2 193 1 6 824 301 236 45 0 chr15 31367157 31367246 -72127728 - PB1D10 SINE Alu -19 98 6 6 824 417 296 29 76 chr15 31368377 31368549 -72126425 + RSINE1 SINE B4 2 165 0 6 824 314 216 137 49 chr15 31369099 31369201 -72125773 + PB1D10 SINE Alu 17 127 0 6 824 507 215 42 147 chr15 31369257 31369457 -72125517 + MTE2a LTR MaLR 1 206 -213 6 824 418 225 67 29 chr15 31369660 31369765 -72125209 + B1F1 SINE Alu 40 148 -1 6 824 1514 147 121 6 chr15 31370275 31370360 -72124614 + RLTR15 LTR ERVK 1 97 -262 6 824 363 23 0 0 chr15 31370360 31370404 -72124570 + (GA)n Simple_repeat Simple_repeat 2 45 0 6 824 1514 147 121 6 chr15 31370404 31370640 -72124334 + RLTR15 LTR ERVK 98 359 0 6 824 281 244 151 0 chr15 31371326 31371412 -72123562 + PB1D9 SINE Alu 20 118 -2 6 824 316 91 71 18 chr15 31374089 31374145 -72120829 - MTD LTR MaLR 0 419 361 6 824 1242 54 0 0 chr15 31374147 31374294 -72120680 + B1_Mm SINE Alu 1 147 0 6 824 324 70 0 0 chr15 31374294 31374337 -72120637 + (A)n Simple_repeat Simple_repeat 1 43 0 6 824 1147 213 136 49 chr15 31374337 31374682 -72120292 - MTD LTR MaLR -44 375 1 6 824 1032 229 88 90 chr15 31374753 31375122 -72119852 + MT2A LTR ERVL 1 501 -100 6 824 377 207 24 0 chr15 31375310 31375392 -72119582 + ORR1E LTR MaLR 49 132 -227 6 824 189 0 0 0 chr15 31375392 31375413 -72119561 + (T)n Simple_repeat Simple_repeat 1 21 0 6 824 303 295 37 19 chr15 31376635 31376742 -72118232 + ORR1E LTR MaLR 255 363 -16 6 824 300 182 0 15 chr15 31377917 31377982 -72116992 + B2_Mm2 SINE B2 10 69 -129 6 824 1298 14 7 0 chr15 31378035 31378181 -72116793 + B1_Mm SINE Alu 1 147 0 6 824 621 174 18 18 chr15 31379217 31379328 -72115646 + RMER21A LTR ERV1 73 183 -764 6 824 435 103 15 0 chr15 31379327 31379395 -72115579 - RMER21A LTR ERV1 -434 513 445 6 824 1720 161 33 27 chr15 31379424 31379755 -72115219 + RMER21A LTR ERV1 92 424 -523 6 824 1040 127 45 9 chr15 31379760 31380016 -72114958 + RMER21A LTR ERV1 758 947 0 6 824 256 239 98 0 chr15 31380017 31380109 -72114865 + B4A SINE B4 191 291 -1 6 824 180 111 0 0 chr15 31380137 31380164 -72114810 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 824 926 111 35 0 chr15 31380223 31380394 -72114580 + (AGGGGG)n Simple_repeat Simple_repeat 3 179 0 6 824 226 330 43 54 chr15 31380435 31380528 -72114446 + B4A SINE B4 66 157 -135 6 824 421 257 0 29 chr15 31380474 31380578 -72114396 + PB1D7 SINE Alu 20 120 0 6 824 306 0 0 0 chr15 31380618 31380652 -72114322 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 824 22 0 0 0 chr15 31381033 31381055 -72113919 + GC_rich Low_complexity Low_complexity 1 22 0 6 824 440 266 100 68 chr15 31381341 31381531 -72113443 - B3A SINE B2 -2 196 1 6 824 459 227 101 31 chr15 31382411 31382570 -72112404 + MLT1D LTR MaLR 28 197 -308 6 824 267 179 143 0 chr15 31383970 31384026 -72110948 + PB1 SINE Alu 37 100 -27 6 824 621 0 0 0 chr15 31384063 31384132 -72110842 + (CCA)n Simple_repeat Simple_repeat 3 71 0 6 824 189 0 0 0 chr15 31384272 31384293 -72110681 + (A)n Simple_repeat Simple_repeat 1 21 0 6 824 212 279 73 0 chr15 31385513 31385581 -72109393 - AluG_3 SINE Alu -98 213 141 6 824 24 32 0 0 chr15 31388267 31388298 -72106676 + AT_rich Low_complexity Low_complexity 1 31 0 6 824 188 336 93 17 chr15 31389802 31389920 -72105054 + MIR SINE MIR 118 244 -18 6 824 1585 136 184 9 chr15 31391302 31391628 -72103346 + ORR1B1 LTR MaLR 4 386 -8 6 824 1002 39 124 0 chr15 31392423 31392552 -72102422 + B1_Mm SINE Alu 2 146 -1 6 824 213 222 0 0 chr15 31392835 31392871 -72102103 + ID4_ SINE ID 29 64 -19 6 824 660 276 31 46 chr15 31392903 31393014 -72101960 + ID_B1 SINE B4 3 115 -109 6 824 1980 133 116 6 chr15 31393014 31393369 -72101605 + ORR1B1 LTR MaLR 1 394 0 6 824 660 276 31 46 chr15 31393369 31393451 -72101523 + ID_B1 SINE B4 116 193 -31 6 824 253 323 111 15 chr15 31393655 31393790 -72101184 + MIRb SINE MIR 17 164 -104 6 824 673 297 50 8 chr15 31393817 31394022 -72100952 + B4 SINE B4 20 237 -55 6 824 297 0 0 0 chr15 31394054 31394087 -72100887 + (TC)n Simple_repeat Simple_repeat 1 33 0 6 824 504 0 0 0 chr15 31394087 31394142 -72100832 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 824 697 161 56 42 chr15 31394217 31394360 -72100614 + B1_Mus2 SINE Alu 3 147 0 6 824 207 0 0 0 chr15 31394367 31394390 -72100584 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 824 486 232 30 10 chr15 31394445 31394545 -72100429 - PB1D10 SINE Alu -11 106 5 6 824 1463 70 11 0 chr15 31394617 31394804 -72100170 - B2_Mm2 SINE B2 -6 189 1 6 824 270 0 0 0 chr15 31394928 31394958 -72100016 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 824 365 250 224 0 chr15 31395171 31395287 -72099687 + RSINE1 SINE B4 3 144 -21 6 824 260 265 86 68 chr15 31396412 31396574 -72098400 + MER34A1 LTR ERV1 78 242 -345 6 824 513 282 8 0 chr15 31396596 31396713 -72098261 - ID_B1 SINE B4 -8 216 99 6 824 412 313 52 0 chr15 31396713 31396730 -72098244 - B1_Mur2 SINE Alu -8 141 1 6 824 273 333 89 24 chr15 31396730 31396898 -72098076 + MER34A1 LTR ERV1 257 435 -152 6 824 780 174 15 0 chr15 31396967 31397099 -72097875 + B1_Mus2 SINE Alu 6 139 -8 6 824 444 266 59 89 chr15 31397132 31397301 -72097673 + RSINE1 SINE B4 2 165 0 6 824 2796 73 42 3 chr15 31397717 31398102 -72096872 + MTB LTR MaLR 1 400 0 6 824 1242 34 7 0 chr15 31398173 31398320 -72096654 + B1_Mus1 SINE Alu 1 148 0 6 824 222 37 0 0 chr15 31398324 31398351 -72096623 + (A)n Simple_repeat Simple_repeat 1 27 0 6 824 661 303 157 16 chr15 31399557 31399812 -72095162 - B4 SINE B4 -1 291 1 6 824 487 68 33 43 chr15 31400893 31400985 -72093989 - L1_Mus3 LINE L1 -2 6636 6546 6 824 1186 91 45 6 chr15 31400987 31401163 -72093811 - B2_Mm2 SINE B2 -12 183 1 6 824 1200 61 0 0 chr15 31401811 31401958 -72093016 - B1_Mus2 SINE Alu 0 147 1 6 824 965 46 0 0 chr15 31402189 31402320 -72092654 + L1Md_T LINE L1 6452 6582 0 6 824 369 62 0 0 chr15 31402499 31402547 -72092427 + (T)n Simple_repeat Simple_repeat 1 48 0 6 824 525 213 0 44 chr15 31402695 31402808 -72092166 - PB1D7 SINE Alu -1 119 12 6 824 696 206 16 0 chr15 31403086 31403212 -72091762 + B1_Mur3 SINE Alu 5 132 -17 6 824 202 370 0 0 chr15 31403604 31403677 -72091297 + CT-rich Low_complexity Low_complexity 2 74 0 6 824 347 328 72 46 chr15 31403960 31404150 -72090824 + Lx8 LINE L1 7066 7268 -205 6 824 951 102 268 11 chr15 31404150 31404329 -72090645 - URR1A DNA MER1_type 0 226 2 6 824 347 328 72 46 chr15 31404329 31404445 -72090529 + Lx8 LINE L1 7269 7380 -93 6 824 1038 79 7 0 chr15 31404654 31404793 -72090181 + B1_Mus2 SINE Alu 2 141 -6 6 824 513 0 0 0 chr15 31404795 31404852 -72090122 + (TAAA)n Simple_repeat Simple_repeat 2 58 0 6 824 621 305 30 20 chr15 31405911 31406112 -72088862 + MER3 DNA MER1_type 5 207 -2 6 824 223 277 158 32 chr15 31406572 31406762 -72088212 + L2c LINE L2 2941 3154 -233 6 824 1656 31 0 0 chr15 31406983 31407174 -72087800 + B2_Mm1t SINE B2 1 191 -2 6 824 1212 238 37 43 chr15 31408718 31409043 -72085931 + MTE2b LTR MaLR 54 376 -3 6 824 523 279 36 31 chr15 31409547 31409739 -72085235 - B3A SINE B2 -5 193 1 6 824 228 336 72 36 chr15 31409803 31409914 -72085060 + PB1D10 SINE Alu 3 117 0 6 824 251 283 0 0 chr15 31409917 31409977 -72084997 + ID4 SINE ID 1 60 -23 6 824 210 263 118 0 chr15 31410269 31410345 -72084629 + L2a LINE L2 1908 1992 -1427 6 824 1165 35 7 40 chr15 31410790 31410941 -72084033 - B1_Mm SINE Alu 0 147 2 6 824 291 309 111 42 chr15 31411256 31411472 -72083502 + L2a LINE L2 3087 3317 -109 6 824 828 172 0 0 chr15 31411878 31412012 -72082962 + B1_Mus1 SINE Alu 4 137 -11 6 824 334 233 41 0 chr15 31412159 31412232 -72082742 + ID4_ SINE ID 6 81 -2 6 824 25 0 0 0 chr15 31412522 31412547 -72082427 + AT_rich Low_complexity Low_complexity 1 25 0 6 824 264 111 0 0 chr15 31412751 31412796 -72082178 + (A)n Simple_repeat Simple_repeat 1 45 0 6 824 214 270 25 86 chr15 31413194 31413275 -72081699 + L2b LINE L2 3279 3354 -21 6 824 226 259 148 0 chr15 31413443 31413524 -72081450 + RLTR13D3 LTR ERVK 1 93 -1021 6 824 21 71 0 0 chr15 31413716 31413758 -72081216 + AT_rich Low_complexity Low_complexity 1 42 0 6 824 21 0 0 0 chr15 31413877 31413898 -72081076 + AT_rich Low_complexity Low_complexity 1 21 0 6 824 350 211 99 56 chr15 31414174 31414341 -72080633 + RLTR13D3 LTR ERVK 983 1114 0 6 824 757 309 43 10 chr15 31415279 31415488 -72079486 - ID_B1 SINE B4 -3 221 6 6 824 818 209 8 0 chr15 31416321 31416455 -72078519 - B1_Mus1 SINE Alu -2 146 12 6 824 1267 14 7 0 chr15 31416520 31416665 -72078309 - B1_Mus2 SINE Alu 0 147 2 6 824 464 198 241 0 chr15 31417501 31417663 -72077311 + Lx2B LINE L1 6780 6980 -20 6 824 531 251 192 6 chr15 31418100 31418272 -72076702 + B3 SINE B2 3 206 -10 6 824 1694 21 0 0 chr15 31418282 31418474 -72076500 + B2_Mm1a SINE B2 2 193 0 6 824 1115 82 0 14 chr15 31418699 31418847 -72076127 + B1_Mus1 SINE Alu 3 148 0 7 824 215 162 44 0 chr15 31418851 31418919 -72076055 + A-rich Low_complexity Low_complexity 2 72 0 7 824 831 181 7 26 chr15 31419411 31419564 -72075410 - B1_Mur4 SINE Alu 0 150 1 7 824 250 192 0 49 chr15 31420502 31420584 -72074390 + A-rich Low_complexity Low_complexity 1 78 0 7 824 24 53 0 0 chr15 31420604 31420642 -72074332 + AT_rich Low_complexity Low_complexity 1 38 0 7 824 1198 56 0 0 chr15 31420663 31420807 -72074167 + B1_Mus1 SINE Alu 3 146 -2 7 824 243 0 0 0 chr15 31420815 31420842 -72074132 + (A)n Simple_repeat Simple_repeat 1 27 0 7 824 1039 112 95 0 chr15 31421711 31421880 -72073094 - B2_Mm2 SINE B2 -8 187 3 7 824 301 276 170 9 chr15 31421962 31422068 -72072906 + RSINE1 SINE B4 12 134 -31 7 824 37 39 0 0 chr15 31422068 31422119 -72072855 + AT_rich Low_complexity Low_complexity 1 51 0 7 824 3457 91 57 8 chr15 31422571 31423081 -72071893 + L1_Mus3 LINE L1 6102 6636 -2 7 824 239 247 24 47 chr15 31423366 31423451 -72071523 + ID4_ SINE ID 1 83 0 7 824 258 105 0 0 chr15 31424046 31424084 -72070890 + (T)n Simple_repeat Simple_repeat 1 38 0 7 824 426 139 4 12 chr15 31424088 31424173 -72070801 - B1_Mus2 SINE Alu -6 143 61 7 824 373 250 68 74 chr15 31424199 31424389 -72070585 + B3A SINE B2 9 197 -1 7 824 429 271 10 0 chr15 31424434 31424530 -72070444 + PB1D10 SINE Alu 21 117 0 7 824 211 328 102 125 chr15 31424739 31424892 -72070082 + L2b LINE L2 3042 3161 -214 7 824 924 158 0 7 chr15 31424892 31425039 -72069935 + B1_Mus1 SINE Alu 1 146 -2 7 824 211 328 102 125 chr15 31425039 31425188 -72069786 + L2b LINE L2 3162 3337 -38 7 824 528 30 0 0 chr15 31425460 31425526 -72069448 + (GGAA)n Simple_repeat Simple_repeat 2 67 0 7 824 270 306 56 93 chr15 31426077 31426239 -72068735 + B4A SINE B4 50 205 -87 7 824 244 235 0 0 chr15 31426254 31426305 -72068669 + RSINE1 SINE B4 107 157 -8 7 824 290 277 23 125 chr15 31426539 31426667 -72068307 + PB1D10 SINE Alu 3 117 0 7 824 298 206 77 64 chr15 31426668 31426746 -72068228 + ID2 SINE ID 2 80 -3 7 824 255 326 93 0 chr15 31426928 31427014 -72067960 + PB1D10 SINE Alu 6 99 -18 7 824 347 212 0 0 chr15 31427016 31427082 -72067892 + ID4_ SINE ID 9 74 -9 7 824 234 62 0 0 chr15 31427195 31427227 -72067747 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 7 824 414 0 0 0 chr15 31427777 31427823 -72067151 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 824 1216 55 0 0 chr15 31428005 31428151 -72066823 + B1_Mm SINE Alu 1 146 -1 7 824 297 0 0 0 chr15 31428151 31428184 -72066790 + (GA)n Simple_repeat Simple_repeat 2 34 0 7 824 22 0 0 0 chr15 31428498 31428520 -72066454 + AT_rich Low_complexity Low_complexity 1 22 0 7 824 26 30 0 0 chr15 31428643 31428676 -72066298 + AT_rich Low_complexity Low_complexity 1 33 0 7 824 504 0 0 0 chr15 31428764 31428820 -72066154 + (GGGGA)n Simple_repeat Simple_repeat 5 60 0 7 824 332 367 81 25 chr15 31429533 31429768 -72065206 + MLT1H LTR MaLR 100 347 -202 7 824 228 296 49 57 chr15 31429794 31429916 -72065058 + MLT1H LTR MaLR 496 616 -8 7 824 760 181 14 27 chr15 31430436 31430584 -72064390 + B1_Mur3 SINE Alu 1 146 -3 7 824 414 285 65 14 chr15 31430929 31431068 -72063906 - RSINE1 SINE B4 -18 147 2 7 824 252 127 179 18 chr15 31431151 31431207 -72063767 - ID4_ SINE ID -17 66 2 7 824 1355 72 66 0 chr15 31431235 31431416 -72063558 - B2_Mm2 SINE B2 -2 193 1 7 824 2188 149 32 34 chr15 31431831 31432240 -72062734 + RLTR11B LTR ERVK 1 408 -45 7 824 288 0 0 0 chr15 31433296 31433328 -72061646 + (A)n Simple_repeat Simple_repeat 1 32 0 7 824 22 0 0 0 chr15 31433476 31433498 -72061476 + AT_rich Low_complexity Low_complexity 1 22 0 7 824 404 306 47 40 chr15 31434162 31434312 -72060662 + B4A SINE B4 38 188 -104 7 824 2432 47 0 0 chr15 31434352 31434650 -72060324 + L1Md_T LINE L1 6285 6582 0 7 824 327 85 234 20 chr15 31434669 31434762 -72060212 + B1_Mus2 SINE Alu 28 144 -6 7 824 336 311 98 51 chr15 31434966 31435200 -72059774 + L1MC5 LINE L1 7616 7860 -101 7 824 209 322 92 11 chr15 31435826 31435941 -72059033 + MIR SINE MIR 32 161 -115 7 824 777 224 132 32 chr15 31435980 31436169 -72058805 + B3 SINE B2 1 208 -8 7 824 12893 72 16 15 chr15 31436503 31436709 -72058265 + MusHAL1 LINE L1 115 312 -2400 7 824 3025 45 3 10 chr15 31436709 31437095 -72057879 + L1Md_F2 LINE L1 6200 6582 0 7 824 12893 72 16 15 chr15 31437095 31438857 -72056117 + MusHAL1 LINE L1 313 2085 -627 7 824 25 31 0 0 chr15 31439412 31439444 -72055530 + AT_rich Low_complexity Low_complexity 1 32 0 7 824 23 0 0 0 chr15 31439779 31439802 -72055172 + AT_rich Low_complexity Low_complexity 1 23 0 7 824 29 65 0 25 chr15 31439998 31440045 -72054929 + AT_rich Low_complexity Low_complexity 1 46 0 7 824 843 182 171 0 chr15 31440045 31440226 -72054748 + B3 SINE B2 1 212 -4 7 824 29 65 0 25 chr15 31440226 31440257 -72054717 + AT_rich Low_complexity Low_complexity 1 31 0 7 824 368 351 96 37 chr15 31440686 31441115 -72053859 - SSU-rRNA_Hsa rRNA rRNA -159 1710 1257 7 824 365 286 12 0 chr15 31442172 31442256 -72052718 - PB1D10 SINE Alu 0 117 33 7 824 716 181 20 34 chr15 31442389 31442538 -72052436 + B1_Mur3 SINE Alu 1 147 -2 7 824 223 391 14 63 chr15 31442667 31442809 -72052165 + B4 SINE B4 43 177 -115 7 824 227 200 0 20 chr15 31442900 31442951 -72052023 + CT-rich Low_complexity Low_complexity 4 53 0 7 824 483 63 0 0 chr15 31443025 31443088 -72051886 + (TG)n Simple_repeat Simple_repeat 1 63 0 7 824 408 277 23 81 chr15 31443383 31443556 -72051418 + RSINE1 SINE B4 3 165 0 7 824 485 217 118 59 chr15 31443609 31443795 -72051179 + B3A SINE B2 2 198 0 7 824 1282 99 17 0 chr15 31443812 31443984 -72050990 - B2_Mm2 SINE B2 -19 176 2 7 824 1093 75 13 27 chr15 31444522 31444672 -72050302 + B1_Mus1 SINE Alu 1 148 0 7 824 274 230 34 11 chr15 31444707 31444795 -72050179 + L1MDa LINE L1 1051 1140 -5493 7 824 1718 21 0 0 chr15 31444933 31445125 -72049849 + B2_Mm1a SINE B2 2 193 0 7 824 254 348 130 75 chr15 31445283 31445628 -72049346 - MER44B DNA MER2_type -6 544 181 7 824 441 196 399 33 chr15 31446290 31446443 -72048531 - B3 SINE B2 -5 211 3 7 824 1030 45 0 0 chr15 31446512 31446646 -72048328 + B1_Mm SINE Alu 14 147 0 7 824 225 0 0 0 chr15 31446646 31446671 -72048303 + (A)n Simple_repeat Simple_repeat 1 25 0 7 824 562 315 0 24 chr15 31446672 31446838 -72048136 - RSINE1 SINE B4 0 165 4 7 824 461 263 0 10 chr15 31446947 31447047 -72047927 - ID_B1 SINE B4 -9 215 117 7 824 454 290 35 76 chr15 31447058 31447256 -72047718 - B3A SINE B2 -5 190 1 7 824 303 222 82 26 chr15 31447479 31447611 -72047363 - B4A SINE B4 -154 138 2 7 824 794 245 151 44 chr15 31447782 31447948 -72047026 - L1MC3 LINE L1 -100 7685 7501 7 824 1317 89 56 0 chr15 31447948 31448128 -72046846 - B2_Mm2 SINE B2 -5 190 1 7 824 794 245 151 44 chr15 31448128 31448345 -72046629 - L1MC3 LINE L1 -285 7500 7261 7 824 1114 82 0 0 chr15 31448626 31448773 -72046201 + B1_Mus1 SINE Alu 2 148 0 7 824 2175 196 144 60 chr15 31448835 31449480 -72045494 + Lx7 LINE L1 6998 7696 0 7 824 274 333 24 85 chr15 31449786 31449950 -72045024 + RSINE1 SINE B4 4 157 -8 7 824 470 251 148 59 chr15 31451115 31451386 -72043588 - L1MB8 LINE L1 -140 6038 5744 7 824 279 228 54 17 chr15 31451552 31451656 -72043318 - L1MB8 LINE L1 -1178 4968 4864 7 824 967 215 25 0 chr15 31451725 31451925 -72043049 - B3 SINE B2 -9 207 3 7 824 304 254 250 0 chr15 31451988 31452243 -72042731 + Charlie1a DNA MER1_type 963 1285 -170 7 824 641 249 162 0 chr15 31452243 31452428 -72042546 - B3 SINE B2 -1 215 1 7 824 304 254 250 0 chr15 31452428 31452444 -72042530 + Charlie1a DNA MER1_type 1286 1301 -154 7 824 255 234 15 15 chr15 31452475 31452540 -72042434 + RSINE1 SINE B4 5 69 -96 7 824 331 295 103 88 chr15 31452904 31453235 -72041739 - ORR1E LTR MaLR -6 353 18 7 824 645 256 133 33 chr15 31453686 31453957 -72041017 + MLT1B LTR MaLR 93 390 0 7 824 3103 134 183 5 chr15 31455233 31455819 -72039155 + RMER6C LTR ERVK 1 690 0 7 824 387 250 16 6 chr15 31455920 31456035 -72038939 + B1_Mur4 SINE Alu 2 149 -1 7 824 248 260 91 0 chr15 31456371 31456448 -72038526 + MIR3 SINE MIR 121 204 -4 7 824 1216 62 0 0 chr15 31456797 31456942 -72038032 - B1_Mus2 SINE Alu 0 147 3 7 824 21 71 0 0 chr15 31456995 31457037 -72037937 + AT_rich Low_complexity Low_complexity 1 42 0 7 824 376 256 115 11 chr15 31457037 31457188 -72037786 - B3A SINE B2 -13 203 42 7 12 1002 220 35 5 chr15 31457223 31457424 -72037550 - B3 SINE B2 -8 208 2 7 825 512 270 0 80 chr15 31457462 31457599 -72037375 + RSINE1 SINE B4 15 140 -25 7 825 183 80 0 0 chr15 31457606 31457631 -72037343 + (CATA)n Simple_repeat Simple_repeat 1 25 0 7 825 817 199 15 59 chr15 31457773 31457976 -72036998 + B3 SINE B2 1 194 -22 7 825 221 57 0 28 chr15 31458108 31458144 -72036830 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 825 257 286 0 0 chr15 31458242 31458298 -72036676 + RSINE1 SINE B4 46 101 -64 7 825 216 268 99 0 chr15 31458450 31458521 -72036453 + MIRc SINE MIR 63 140 -128 7 825 306 197 70 0 chr15 31458892 31458963 -72036011 + B3 SINE B2 21 96 -120 7 825 192 330 90 18 chr15 31459262 31459373 -72035601 + MIRb SINE MIR 74 192 -76 7 825 279 54 0 0 chr15 31460427 31460464 -72034510 + (CCCG)n Simple_repeat Simple_repeat 3 39 0 8 825 26 82 0 0 chr15 31460776 31460837 -72034137 + GC_rich Low_complexity Low_complexity 1 61 0 8 825 25 31 0 0 chr15 31461010 31461042 -72033932 + GC_rich Low_complexity Low_complexity 1 32 0 8 825 23 33 0 0 chr15 31461078 31461108 -72033866 + GC_rich Low_complexity Low_complexity 1 30 0 8 825 1082 75 0 52 chr15 31461601 31461756 -72033218 + B1_Mus1 SINE Alu 2 148 0 8 825 605 176 21 29 chr15 31461760 31461900 -72033074 + RMER4B LTR ERVK 33 171 -414 8 825 254 194 0 15 chr15 31461917 31461985 -72032989 + GA-rich Low_complexity Low_complexity 2 68 0 8 825 304 220 87 20 chr15 31462032 31462162 -72032812 + RMER4B LTR ERVK 343 551 -60 8 825 234 0 0 0 chr15 31462178 31462204 -72032770 + (A)n Simple_repeat Simple_repeat 1 26 0 8 825 216 0 0 0 chr15 31462253 31462277 -72032697 + (A)n Simple_repeat Simple_repeat 1 24 0 8 825 225 227 0 0 chr15 31463029 31463073 -72031901 - B1_Mur1 SINE Alu -9 140 97 8 825 235 232 10 69 chr15 31463611 31463713 -72031261 + CT-rich Low_complexity Low_complexity 3 98 0 8 825 471 222 167 0 chr15 31464000 31464126 -72030848 + B1_Mur1 SINE Alu 3 149 0 8 825 1448 205 53 28 chr15 31464545 31464902 -72030072 - ORR1D2 LTR MaLR 0 370 5 8 825 471 35 0 0 chr15 31465116 31465173 -72029801 + (TC)n Simple_repeat Simple_repeat 1 57 0 8 825 303 221 56 34 chr15 31465313 31465402 -72029572 + MER89 LTR ERV1 1 91 -468 8 825 543 281 166 50 chr15 31465490 31465749 -72029225 + MER89 LTR ERV1 270 558 -1 8 825 314 286 69 54 chr15 31466758 31466961 -72028013 - L1MC4 LINE L1 -7 8035 7830 8 825 596 247 58 26 chr15 31466977 31467168 -72027806 - B3A SINE B2 -1 197 1 8 825 432 0 0 0 chr15 31467179 31467227 -72027747 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 825 571 246 77 0 chr15 31467278 31467408 -72027566 - RSINE1 SINE B4 -20 145 6 8 825 261 0 0 0 chr15 31467410 31467439 -72027535 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 8 825 355 243 0 0 chr15 31467443 31467513 -72027461 - B1_Mur2 SINE Alu -16 133 64 8 825 225 224 250 0 chr15 31467454 31467530 -72027444 - ID_B1 SINE B4 -24 200 106 8 825 1876 155 33 72 chr15 31468039 31468428 -72026546 + ORR1D1 LTR MaLR 1 374 0 8 825 2265 138 42 11 chr15 31468439 31468821 -72026153 + ORR1B1 LTR MaLR 1 394 0 8 825 408 321 170 4 chr15 31468834 31469075 -72025899 - L1MB8 LINE L1 -289 5889 5609 8 825 243 0 0 0 chr15 31469224 31469251 -72025723 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 825 216 0 0 0 chr15 31469645 31469669 -72025305 + (A)n Simple_repeat Simple_repeat 1 24 0 8 825 432 170 0 43 chr15 31470085 31470177 -72024797 + ORR1E LTR MaLR 26 113 -246 8 825 320 239 10 61 chr15 31470219 31470317 -72024657 + ORR1E LTR MaLR 250 342 -37 8 825 297 100 0 0 chr15 31471179 31471229 -72023745 + (TG)n Simple_repeat Simple_repeat 2 51 0 8 825 480 229 175 2 chr15 31471506 31471692 -72023282 + Lx2B LINE L1 5666 5900 -1560 8 825 320 250 0 146 chr15 31472116 31472219 -72022755 + RSINE1 SINE B4 78 165 0 8 825 1176 188 44 79 chr15 31472321 31472662 -72022312 - RMER12 LTR ERVK 0 1322 994 8 825 708 260 67 8 chr15 31472957 31473224 -72021750 + RLTR20D LTR ERVK 1 283 -285 8 825 392 254 93 36 chr15 31473209 31473272 -72021702 + RLTR20D LTR ERVK 416 479 -99 8 825 360 0 0 0 chr15 31473272 31473312 -72021662 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 825 392 254 93 36 chr15 31473312 31473387 -72021587 + RLTR20D LTR ERVK 480 561 -17 8 825 1524 221 33 90 chr15 31473399 31474153 -72020821 - RMER12 LTR ERVK -1156 692 1 8 825 784 226 208 0 chr15 31474182 31474350 -72020624 + B3 SINE B2 4 206 -10 8 825 380 187 176 16 chr15 31474463 31474588 -72020386 + B1_Mur2 SINE Alu 4 148 -1 8 825 249 108 0 0 chr15 31474590 31474627 -72020347 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 8 825 240 286 43 0 chr15 31474772 31474842 -72020132 + MLT1H LTR MaLR 134 206 -343 8 825 653 113 0 0 chr15 31475679 31475776 -72019198 + B1_Mur4 SINE Alu 44 140 -10 8 825 679 100 18 0 chr15 31475777 31475887 -72019087 + (GA)n Simple_repeat Simple_repeat 1 112 0 8 825 540 0 0 0 chr15 31475887 31475947 -72019027 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 8 825 203 149 0 41 chr15 31475982 31476031 -72018943 + T-rich Low_complexity Low_complexity 1 47 0 8 825 608 269 50 39 chr15 31476031 31476213 -72018761 - ID_B1 SINE B4 0 224 41 8 825 324 267 170 39 chr15 31476296 31476526 -72018448 - L1MC3 LINE L1 -1829 5956 5697 8 825 639 223 14 0 chr15 31476744 31476883 -72018091 - ID_B1 SINE B4 -4 220 80 8 825 2037 180 62 3 chr15 31477210 31477594 -72017380 - MTB_Mm LTR MaLR 0 407 1 8 825 4207 165 134 137 chr15 31477594 31478688 -72016286 - MTB_Mm-int LTR MaLR 0 1258 162 8 825 613 191 72 87 chr15 31478688 31478883 -72016091 - B2_Mm2 SINE B2 -1 194 3 8 825 4207 165 134 137 chr15 31478883 31479049 -72015925 - MTB_Mm-int LTR MaLR -1097 161 2 8 825 460 221 61 9 chr15 31479049 31479163 -72015811 - MTB_Mm LTR MaLR -1 406 287 8 825 276 261 145 21 chr15 31479169 31479314 -72015660 + MLT1B LTR MaLR 11 173 -217 8 825 7430 117 30 17 chr15 31479348 31480486 -72014488 - MurERV4_19-int LTR ERVK -3240 2540 1388 8 825 1172 69 0 0 chr15 31480599 31480743 -72014231 + B1_Mm SINE Alu 3 146 -1 8 825 1598 36 0 5 chr15 31481330 31481524 -72013450 - B2_Mm1a SINE B2 0 193 1 8 825 5466 155 36 4 chr15 31481769 31482701 -72012273 + Lx2 LINE L1 6023 6984 -13 8 825 26 0 0 0 chr15 31482701 31482727 -72012247 + AT_rich Low_complexity Low_complexity 1 26 0 8 825 1137 110 65 21 chr15 31482972 31483158 -72011816 - Lx2 LINE L1 -197 6800 6607 8 825 603 193 0 44 chr15 31483279 31483393 -72011581 + PB1D10 SINE Alu 1 109 -8 8 825 848 229 34 5 chr15 31484062 31484268 -72010706 - B3 SINE B2 -1 215 4 8 825 613 226 60 0 chr15 31484308 31484441 -72010533 + B1_Mur4 SINE Alu 2 142 -8 8 825 245 241 0 0 chr15 31484544 31484598 -72010376 + L1MC4 LINE L1 7845 7898 -144 8 825 898 154 15 76 chr15 31484679 31484876 -72010098 - RLTR28 LTR ERVL -12 512 328 8 825 1208 148 106 14 chr15 31484877 31485301 -72009673 - RLTR11B LTR ERVK 0 453 1 8 825 367 96 0 0 chr15 31485325 31485377 -72009597 - RLTR28 LTR ERVL -428 53 2 8 825 424 258 0 0 chr15 31485953 31486042 -72008932 - L1_Mur3 LINE L1 -1533 4607 4519 8 825 1342 82 5 26 chr15 31486086 31486275 -72008699 + B2_Mm2 SINE B2 1 185 -10 8 825 353 228 0 0 chr15 31486325 31486404 -72008570 + tRNA-Leu-CTG tRNA tRNA 1 79 -7 8 825 1230 61 0 0 chr15 31486409 31486557 -72008417 - B1_Mus1 SINE Alu 0 148 1 8 825 529 239 38 206 chr15 31486704 31487131 -72007843 + RMER20B LTR ERVK 245 599 -28 8 825 1639 184 92 39 chr15 31487187 31487576 -72007398 + RMER15 LTR ERVL 87 496 -79 8 825 1328 217 88 25 chr15 31487580 31487916 -72007058 + RLTR11A2 LTR ERVK 5 369 -158 8 825 3427 42 4 123 chr15 31487916 31488411 -72006563 + RLTR10C LTR ERVK 1 436 0 8 825 1328 212 92 22 chr15 31488411 31488460 -72006514 + RLTR11A2 LTR ERVK 370 414 -113 8 825 1024 102 0 0 chr15 31488496 31488643 -72006331 - B1_Mus1 SINE Alu 0 148 2 8 825 250 191 132 0 chr15 31488649 31488717 -72006257 + RLTR11A2 LTR ERVK 451 527 0 8 825 333 221 13 25 chr15 31488718 31488797 -72006177 + RMER15 LTR ERVL 491 568 -7 8 825 1247 93 33 6 chr15 31488798 31488956 -72006018 + B2_Mm1a SINE B2 2 160 -33 8 825 243 0 0 0 chr15 31488956 31488983 -72005991 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 8 825 1247 93 33 6 chr15 31488983 31489007 -72005967 + B2_Mm1a SINE B2 161 189 -4 8 825 1724 285 60 93 chr15 31489024 31489243 -72005731 - L1_Mur3 LINE L1 -1619 4524 4368 8 825 378 74 0 0 chr15 31489252 31489306 -72005668 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 825 592 276 6 35 chr15 31489306 31489465 -72005509 - RSINE1 SINE B4 -10 155 1 8 825 2146 270 69 64 chr15 31489465 31489502 -72005472 - L1_Mur3 LINE L1 -1776 4367 4307 8 825 2279 69 79 0 chr15 31489502 31489805 -72005169 + ORR1A2 LTR MaLR 1 327 0 8 825 2146 267 71 59 chr15 31489805 31490178 -72004796 - L1_Mur3 LINE L1 -1574 4306 3894 8 825 216 0 0 0 chr15 31490178 31490202 -72004772 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 825 2146 267 71 59 chr15 31490202 31490435 -72004539 - L1_Mur3 LINE L1 -1987 3893 3662 8 825 345 102 0 0 chr15 31490435 31490494 -72004480 + (TG)n Simple_repeat Simple_repeat 2 60 0 8 825 2146 267 71 59 chr15 31490494 31490672 -72004302 - L1_Mur3 LINE L1 -2219 3661 3487 8 825 1310 80 34 11 chr15 31490672 31490849 -72004125 - B2_Mm2 SINE B2 -14 181 1 8 825 2146 267 71 59 chr15 31490849 31491085 -72003889 - L1_Mur3 LINE L1 -2394 3486 3270 8 825 346 247 301 47 chr15 31491087 31491363 -72003611 - MER74A LTR ERVL -188 370 25 8 825 358 313 91 38 chr15 31491548 31491734 -72003240 - MLT1F1 LTR MaLR -113 456 261 8 825 534 278 129 54 chr15 31491802 31491840 -72003134 - B4A SINE B4 -51 241 210 8 825 1556 130 253 14 chr15 31491840 31492136 -72002838 + ORR1B2 LTR MaLR 1 367 0 8 825 534 278 129 54 chr15 31492136 31492321 -72002653 - B4A SINE B4 -83 209 1 8 825 1225 48 0 0 chr15 31492535 31492682 -72002292 + B1_Mm SINE Alu 1 147 0 8 825 915 225 128 55 chr15 31492703 31493103 -72001871 + RMER15 LTR ERVL 45 555 -20 8 825 327 218 146 46 chr15 31493447 31493577 -72001397 - MLT1F LTR MaLR -41 507 365 8 825 315 0 0 0 chr15 31494116 31494151 -72000823 + (TC)n Simple_repeat Simple_repeat 2 36 0 8 825 425 123 0 0 chr15 31494254 31494319 -72000655 + B1_Mur2 SINE Alu 84 148 -1 8 825 183 85 42 21 chr15 31494322 31494370 -72000604 + (CAAAA)n Simple_repeat Simple_repeat 3 51 0 8 825 265 342 49 24 chr15 31494728 31494851 -72000123 + MLT2F LTR ERVL 1 126 -537 8 825 850 223 29 29 chr15 31495692 31495900 -71999074 - ID_B1 SINE B4 -15 209 2 8 825 765 226 0 27 chr15 31495966 31495977 -71998997 - B1_Mur2 SINE Alu -3 146 139 8 825 288 77 0 0 chr15 31495977 31496016 -71998958 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 8 825 765 226 0 27 chr15 31496016 31496154 -71998820 - B1_Mur2 SINE Alu -11 138 1 8 825 288 0 0 0 chr15 31496160 31496192 -71998782 + (TCC)n Simple_repeat Simple_repeat 3 34 0 8 825 264 59 0 0 chr15 31496192 31496225 -71998749 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 8 825 1896 170 94 73 chr15 31496225 31496638 -71998336 - Lx5 LINE L1 -19 7031 6602 8 825 1014 146 0 0 chr15 31496638 31496809 -71998165 + (TTC)n Simple_repeat Simple_repeat 1 171 0 8 825 1896 170 94 73 chr15 31496809 31496832 -71998142 - Lx5 LINE L1 -449 6601 6586 8 825 782 201 18 18 chr15 31496880 31497047 -71997927 + B3 SINE B2 2 168 -48 8 825 359 41 20 0 chr15 31497048 31497097 -71997877 + (CATA)n Simple_repeat Simple_repeat 2 51 0 8 825 277 308 7 40 chr15 31497329 31497478 -71997496 + CT-rich Low_complexity Low_complexity 2 145 0 8 825 389 184 136 0 chr15 31497515 31497618 -71997356 + B3 SINE B2 95 211 -5 8 825 661 152 40 25 chr15 31497629 31497815 -71997159 + B3 SINE B2 1 194 -1 8 825 224 236 0 0 chr15 31497858 31497913 -71997061 + A-rich Low_complexity Low_complexity 1 55 0 8 825 288 0 0 0 chr15 31499018 31499050 -71995924 + (TTG)n Simple_repeat Simple_repeat 2 33 0 9 825 243 0 0 0 chr15 31499779 31499806 -71995168 + (TCTA)n Simple_repeat Simple_repeat 2 28 0 9 825 680 241 84 22 chr15 31500321 31500499 -71994475 - ID_B1 SINE B4 -34 190 2 1 825 211 236 93 40 chr15 31502052 31502119 -71992855 - PB1 SINE Alu -2 125 55 2 825 938 209 45 27 chr15 31502119 31502340 -71992634 - MTD LTR MaLR 0 419 195 3 825 1003 139 87 39 chr15 31502717 31502946 -71992028 - MTC LTR MaLR -77 330 90 4 825 900 28 0 0 chr15 31502946 31503053 -71991921 + (TTTC)n Simple_repeat Simple_repeat 3 109 0 5 825 757 219 111 43 chr15 31503053 31503264 -71991710 - MTC LTR MaLR -190 229 1 4 825 396 71 0 51 chr15 31503492 31503551 -71991423 + B1_Mus2 SINE Alu 92 147 0 6 825 978 139 54 22 chr15 31503659 31503843 -71991131 + URR1A DNA MER1_type 37 226 0 7 825 754 180 14 7 chr15 31503880 31504020 -71990954 - B1F2 SINE Alu -8 141 1 8 825 419 267 86 0 chr15 31504054 31504170 -71990804 + ID_B1 SINE B4 79 204 -20 9 825 375 23 0 0 chr15 31504177 31504221 -71990753 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 825 305 282 86 52 chr15 31504314 31504430 -71990544 - MLT1C LTR MaLR -63 404 285 1 825 573 175 6 10 chr15 31504600 31504716 -71990258 + B1_Mus2 SINE Alu 1 119 -1 1 825 567 209 9 0 chr15 31504873 31504983 -71989991 - PB1D9 SINE Alu -5 115 5 1 825 353 75 19 0 chr15 31505253 31505306 -71989668 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 825 846 186 0 0 chr15 31505323 31505463 -71989511 - B1_Mur4 SINE Alu -10 140 1 1 825 517 279 19 87 chr15 31505468 31505496 -71989478 - B2_Mm2 SINE B2 0 195 168 1 825 369 0 0 0 chr15 31505496 31505537 -71989437 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 825 393 22 0 0 chr15 31505537 31505582 -71989392 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 825 765 233 68 18 chr15 31505582 31505760 -71989214 - B3 SINE B2 -31 185 2 1 825 688 126 0 51 chr15 31506321 31506438 -71988536 - B1_Mur3 SINE Alu 0 149 39 1 825 245 296 14 0 chr15 31506550 31506621 -71988353 + (TATATG)n Simple_repeat Simple_repeat 3 74 0 2 825 22 0 0 0 chr15 31506670 31506692 -71988282 + AT_rich Low_complexity Low_complexity 1 22 0 2 825 1190 62 0 0 chr15 31506692 31506837 -71988137 - B1_Mus2 SINE Alu -1 146 2 2 825 276 30 0 0 chr15 31506923 31506956 -71988018 + (TC)n Simple_repeat Simple_repeat 2 34 0 2 825 615 181 0 54 chr15 31507604 31507715 -71987259 - ID_B1 SINE B4 -8 216 112 2 825 299 273 117 123 chr15 31507947 31507969 -71987005 - B4 SINE B4 -53 239 177 2 825 566 217 61 0 chr15 31507969 31508084 -71986890 - B1_Mur2 SINE Alu -1 148 27 2 825 299 273 117 123 chr15 31508084 31508118 -71986856 - B4 SINE B4 -53 176 70 2 825 207 0 0 0 chr15 31508364 31508387 -71986587 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 825 2892 127 42 63 chr15 31508390 31508961 -71986013 - RLTR13C1 LTR ERVK -117 866 308 2 825 2951 52 0 0 chr15 31508965 31509311 -71985663 - ORR1A1 LTR MaLR 0 346 1 2 825 14098 58 7 2 chr15 31509311 31511093 -71983881 - ORR1A1-int LTR MaLR 0 1792 1 2 825 1537 31 0 72 chr15 31511093 31511301 -71983673 - ORR1A1 LTR MaLR 0 346 154 2 825 495 270 29 12 chr15 31511352 31511482 -71983492 - ID_B1 SINE B4 -152 140 5 3 825 198 322 0 33 chr15 31512154 31512215 -71982759 - MIRb SINE MIR -93 175 117 3 825 857 230 25 5 chr15 31512445 31512646 -71982328 + B3 SINE B2 1 205 -11 3 825 315 0 0 0 chr15 31513050 31513085 -71981889 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 825 354 251 198 21 chr15 31514102 31514289 -71980685 - MLT1K LTR MaLR -19 576 357 3 825 808 250 47 39 chr15 31514445 31514703 -71980271 - RMER5 LTR ERV1 -87 447 188 3 825 741 260 47 33 chr15 31514709 31514920 -71980054 - RMER5 LTR ERV1 -306 228 15 3 825 500 254 246 13 chr15 31515324 31515542 -71979432 + B4 SINE B4 2 270 -22 3 825 236 304 0 0 chr15 31515575 31515642 -71979332 + (CACG)n Simple_repeat Simple_repeat 1 67 0 3 825 936 80 35 28 chr15 31515673 31515815 -71979159 - B1_Mus2 SINE Alu 0 147 5 3 825 832 151 65 7 chr15 31515815 31515968 -71979006 - B3 SINE B2 -54 162 1 3 825 392 265 28 38 chr15 31516253 31516359 -71978615 + PB1D10 SINE Alu 12 116 -1 4 825 241 286 0 0 chr15 31516709 31516758 -71978216 - RSINE1 SINE B4 -10 155 107 4 825 189 107 0 0 chr15 31517052 31517080 -71977894 + (A)n Simple_repeat Simple_repeat 1 28 0 4 825 1090 64 29 0 chr15 31517084 31517224 -71977750 + B1_Mus1 SINE Alu 5 148 0 4 825 638 252 104 59 chr15 31517493 31517763 -71977211 + B4A SINE B4 5 286 -6 4 825 1687 26 0 0 chr15 31518074 31518265 -71976709 - B2_Mm1a SINE B2 -1 192 2 4 825 1098 76 0 7 chr15 31518283 31518429 -71976545 - B1_Mus1 SINE Alu -2 146 2 4 825 267 277 111 37 chr15 31518768 31518903 -71976071 + Tigger5 DNA MER2_type 94 238 -2168 4 825 345 217 194 11 chr15 31518996 31519089 -71975885 - PB1D9 SINE Alu -3 117 8 4 825 261 250 161 12 chr15 31519918 31519999 -71974975 - RSINE1 SINE B4 -36 129 37 4 825 233 278 209 11 chr15 31520910 31521001 -71973973 + PB1 SINE Alu 17 125 -2 5 825 240 300 228 11 chr15 31521032 31521295 -71973679 + Lx8 LINE L1 7152 7471 -2 5 825 591 224 47 58 chr15 31521344 31521506 -71973468 + B3 SINE B2 45 210 -6 5 825 341 317 58 0 chr15 31524665 31524769 -71970205 + RSINE1 SINE B4 5 114 -51 5 825 1830 194 100 43 chr15 31525937 31526378 -71968596 - RMER4A LTR ERVK 0 466 1 5 825 1263 27 0 0 chr15 31526556 31526703 -71968271 - B1_Mus2 SINE Alu 0 147 1 5 825 262 231 0 37 chr15 31528331 31528385 -71966589 + ID4_ SINE ID 2 53 -30 5 825 650 278 33 19 chr15 31528379 31528571 -71966403 + B3A SINE B2 10 194 -1 5 825 645 225 22 11 chr15 31528562 31528742 -71966232 + RCHARR1 DNA MER1_type 746 927 -47 5 825 2966 86 2 8 chr15 31530040 31530438 -71964536 - MTA_Mm LTR MaLR 0 396 1 5 825 236 278 115 44 chr15 31532072 31532185 -71962789 + MIR SINE MIR 37 157 -105 6 825 398 176 12 0 chr15 31532185 31532270 -71962704 + (TAA)n Simple_repeat Simple_repeat 3 88 0 6 825 297 214 80 45 chr15 31532878 31532966 -71962008 - Lx LINE L1 -859 5795 5705 6 825 354 250 33 0 chr15 31532981 31533073 -71961901 + RSINE1 SINE B4 13 107 -58 6 825 1270 115 10 25 chr15 31533414 31533610 -71961364 - B2_Mm1t SINE B2 0 193 1 6 825 259 250 44 0 chr15 31533672 31533740 -71961234 + L1MB3 LINE L1 5843 5913 -270 6 825 382 253 252 4 chr15 31533795 31534021 -71960953 - B4A SINE B4 -8 284 3 6 825 524 233 115 29 chr15 31534085 31534293 -71960681 + L1MB8 LINE L1 5952 6177 -1 6 825 904 217 6 16 chr15 31534557 31534740 -71960234 + B3A SINE B2 1 181 -17 6 825 531 185 5 33 chr15 31534794 31534880 -71960094 + (CA)n Simple_repeat Simple_repeat 1 84 0 6 825 279 0 0 0 chr15 31534880 31534911 -71960063 + (TC)n Simple_repeat Simple_repeat 1 31 0 7 825 531 185 5 33 chr15 31534911 31535008 -71959966 + (CA)n Simple_repeat Simple_repeat 1 94 0 7 825 255 191 0 0 chr15 31535019 31535082 -71959892 + (CA)n Simple_repeat Simple_repeat 1 63 0 7 825 461 193 7 0 chr15 31535099 31535249 -71959725 + (CA)n Simple_repeat Simple_repeat 1 151 0 7 825 602 151 4 42 chr15 31535262 31535498 -71959476 + (CA)n Simple_repeat Simple_repeat 1 226 0 7 825 383 155 56 0 chr15 31535514 31535585 -71959389 + HAL1-3A_ME LINE L1 1974 2048 -810 7 825 542 177 0 50 chr15 31535989 31536090 -71958884 + ORR1D1 LTR MaLR 85 180 -194 7 825 407 326 91 11 chr15 31536441 31536627 -71958347 + ID_B1 SINE B4 20 220 -4 7 825 354 231 132 0 chr15 31536844 31536935 -71958039 - Lx8 LINE L1 -308 7165 7063 7 825 1820 161 71 11 chr15 31537344 31537695 -71957279 - ORR1D1 LTR MaLR 0 374 3 7 825 920 181 53 183 chr15 31538406 31538744 -71956230 - RMER1C Other Other 0 1342 1049 7 825 261 270 69 43 chr15 31540135 31540251 -71954723 - PB1D7 SINE Alu -1 119 1 7 825 1168 76 0 0 chr15 31540482 31540627 -71954347 + B1_Mus1 SINE Alu 4 148 0 7 825 456 173 126 9 chr15 31540666 31540774 -71954200 + PB1D7 SINE Alu 14 130 -20 8 825 994 225 28 19 chr15 31541771 31541984 -71952990 + ID_B1 SINE B4 1 215 -9 8 825 1301 116 0 0 chr15 31542289 31542470 -71952504 - B2_Mm2 SINE B2 -14 181 1 8 825 211 362 116 20 chr15 31543181 31543525 -71951449 - L2 LINE L2 -556 2863 2487 8 825 755 301 52 59 chr15 31544432 31544891 -71950083 + L1MC4 LINE L1 6771 7226 -816 8 825 275 183 33 16 chr15 31545155 31545216 -71949758 + L1MC4 LINE L1 7572 7633 -409 8 825 1136 72 0 0 chr15 31546006 31546144 -71948830 + B1_Mus1 SINE Alu 1 138 -10 8 825 183 42 0 0 chr15 31546144 31546168 -71948806 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8 825 251 314 46 11 chr15 31546209 31546296 -71948678 - Kanga1c DNA Tc2 -624 105 16 8 825 328 302 52 0 chr15 31546967 31547063 -71947911 - ID_B1 SINE B4 -7 217 117 8 825 1384 82 0 30 chr15 31548725 31548926 -71946048 - B2_Mm2 SINE B2 0 195 1 8 825 303 208 0 0 chr15 31549445 31549498 -71945476 + L3 LINE CR1 4370 4422 -67 9 825 243 0 0 0 chr15 31549809 31549836 -71945138 + (TG)n Simple_repeat Simple_repeat 1 27 0 9 825 664 206 53 0 chr15 31549884 31550015 -71944959 - RSINE1 SINE B4 -25 140 3 9 825 240 323 0 0 chr15 31551164 31551288 -71943686 + (TG)n Simple_repeat Simple_repeat 1 124 0 9 825 3565 20 2 0 chr15 31551648 31552043 -71942931 - MTA_Mm LTR MaLR 0 396 1 9 825 597 261 15 0 chr15 31552210 31552340 -71942634 + ID_B1 SINE B4 86 217 -7 9 825 529 281 41 11 chr15 31552861 31553102 -71941872 - MLT1B LTR MaLR -11 379 101 9 825 279 0 0 0 chr15 31553102 31553133 -71941841 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 825 671 266 84 84 chr15 31553169 31553456 -71941518 - B4A SINE B4 -4 288 2 9 825 2002 140 52 91 chr15 31553463 31553848 -71941126 + ORR1B1 LTR MaLR 25 394 0 9 825 1311 254 30 63 chr15 31553921 31554287 -71940687 + MTEa LTR MaLR 3 356 -23 1 825 2037 251 38 42 chr15 31554321 31554899 -71940075 + MTEa-int LTR MaLR 1 576 -1004 1 825 1100 235 130 17 chr15 31554902 31555201 -71939773 + ORR1D2 LTR MaLR 15 347 -23 1 825 1173 220 48 41 chr15 31555226 31555520 -71939454 + MTEa-int LTR MaLR 570 865 -715 1 825 1192 75 0 0 chr15 31555563 31555709 -71939265 - B1_Mm SINE Alu -1 146 1 1 825 2152 108 9 65 chr15 31555749 31556087 -71938887 + ORR1A2 LTR MaLR 1 319 -8 1 825 1118 103 54 6 chr15 31556163 31556329 -71938645 - B2_Mm2 SINE B2 -21 174 1 1 825 343 223 90 60 chr15 31556382 31556482 -71938492 - RSINE1 SINE B4 -33 132 30 1 825 363 23 0 0 chr15 31556753 31556797 -71938177 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 825 471 18 0 0 chr15 31556844 31556900 -71938074 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 825 460 326 82 7 chr15 31557930 31558223 -71936751 - L1ME1 LINE L1 -19 6160 5846 1 825 646 254 81 46 chr15 31558565 31558936 -71936038 - L1MD LINE L1 -795 5351 4968 1 825 772 126 28 17 chr15 31558955 31559132 -71935842 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 825 687 254 57 95 chr15 31559175 31559470 -71935504 - L1M4 LINE L1 -2246 3900 3604 1 825 543 244 8 8 chr15 31559470 31559602 -71935372 - B1F SINE Alu -16 133 2 1 825 687 252 53 106 chr15 31559602 31559694 -71935280 - L1M4 LINE L1 -2543 3603 3526 1 825 185 159 23 0 chr15 31560020 31560064 -71934910 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 1 825 495 220 0 0 chr15 31561669 31561801 -71933173 + CT-rich Low_complexity Low_complexity 2 133 0 1 825 476 285 7 7 chr15 31561806 31561951 -71933023 - B1_Mur1 SINE Alu 0 149 5 1 825 341 267 131 19 chr15 31563156 31563263 -71931711 - RSINE1 SINE B4 -15 150 32 1 825 1367 285 105 76 chr15 31563300 31563986 -71930988 - Lx8 LINE L1 -10 7463 6758 1 825 367 189 12 76 chr15 31563989 31564201 -71930773 + A-rich Low_complexity Low_complexity 1 198 0 1 825 397 274 20 20 chr15 31566943 31567092 -71927882 + MLT1B-int LTR MaLR 1082 1230 -157 1 825 860 250 114 36 chr15 31567136 31567443 -71927531 + MLT1B LTR MaLR 39 369 -21 1 825 247 261 199 44 chr15 31567693 31567729 -71927245 - B4 SINE B4 -41 251 95 1 825 498 220 30 0 chr15 31567729 31567829 -71927145 - PB1D10 SINE Alu -5 112 10 1 825 273 315 83 9 chr15 31567935 31568044 -71926930 + MLT1I LTR MaLR 292 408 -3 1 825 1081 274 133 5 chr15 31569092 31569536 -71925438 - L1MA6 LINE L1 -8 6292 5792 1 825 1164 92 53 26 chr15 31570172 31570362 -71924612 - B2_Mm2 SINE B2 0 195 1 1 825 1164 173 5 18 chr15 31570451 31570836 -71924138 + BGLII_B LTR ERVK 1 431 -10 1 825 3222 54 21 0 chr15 31570958 31571346 -71923628 + MTA_Mm LTR MaLR 1 396 0 1 825 292 257 44 44 chr15 31571356 31571470 -71923504 + L1MA5 LINE L1 6182 6295 -5 1 825 254 267 144 0 chr15 31571478 31571568 -71923406 + L1MA6 LINE L1 6175 6277 -23 1 825 211 93 23 23 chr15 31572173 31572217 -71922757 + (GGA)n Simple_repeat Simple_repeat 1 44 0 1 825 211 220 104 7 chr15 31572328 31572430 -71922544 - MIRc SINE MIR -110 158 44 1 825 360 130 0 0 chr15 31572757 31572826 -71922148 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 825 340 291 48 0 chr15 31572956 31573059 -71921915 + MER45A DNA Tip100 64 171 -7 1 825 861 212 89 5 chr15 31573567 31573757 -71921217 - B3 SINE B2 -9 207 2 1 825 320 339 62 21 chr15 31573992 31574185 -71920789 + RMER15 LTR ERVL 359 559 -16 1 825 573 294 57 15 chr15 31574187 31574450 -71920524 - L1MB3 LINE L1 -33 6150 5877 1 825 604 186 40 0 chr15 31574458 31574582 -71920392 + RMER20B LTR ERVK 1 129 -498 1 825 384 281 42 59 chr15 31575292 31575481 -71919493 + L1_Rod LINE L1 5074 5264 -616 1 825 1849 120 60 15 chr15 31575481 31575845 -71919129 + ORR1A4 LTR MaLR 1 394 0 1 825 718 161 8 0 chr15 31575949 31576073 -71918901 - B1_Mur2 SINE Alu -24 125 1 1 825 306 174 0 140 chr15 31575989 31576089 -71918885 - MT2B LTR ERVL -362 239 154 1 825 407 284 0 181 chr15 31576226 31576307 -71918667 + MT2A LTR ERVL 6 85 -448 1 825 285 51 0 0 chr15 31576307 31576346 -71918628 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 825 1181 43 0 0 chr15 31576349 31576490 -71918484 - B1_Mm SINE Alu -6 141 1 1 825 407 284 0 181 chr15 31576490 31576559 -71918415 + MT2A LTR ERVL 86 132 -401 1 825 970 195 289 24 chr15 31576597 31576933 -71918041 + MT2A LTR ERVL 109 533 0 1 825 448 274 122 33 chr15 31577141 31577322 -71917652 - Tigger5 DNA MER2_type -2182 224 28 1 825 298 301 0 14 chr15 31577294 31577368 -71917606 - PB1D10 SINE Alu -34 83 11 1 825 272 273 0 39 chr15 31577363 31577485 -71917489 - ID4 SINE ID -18 134 17 1 825 212 344 82 30 chr15 31577497 31577632 -71917342 - ID_B1 SINE B4 -1 223 82 1 825 260 329 0 12 chr15 31577640 31577723 -71917251 - Tigger5 DNA MER2_type -2322 84 3 1 825 835 346 116 27 chr15 31577723 31578394 -71916580 + LTR78 LTR ERV1 471 1201 -103 1 825 602 281 112 39 chr15 31579537 31579867 -71915107 - MTE2a LTR MaLR -6 373 20 1 825 365 299 34 14 chr15 31580289 31580435 -71914539 + LTR40a LTR ERVL 48 196 -323 1 825 216 97 0 0 chr15 31580833 31580864 -71914110 + (CGTG)n Simple_repeat Simple_repeat 4 34 0 1 825 192 77 0 0 chr15 31581012 31581038 -71913936 + (T)n Simple_repeat Simple_repeat 1 26 0 1 825 323 253 0 60 chr15 31581954 31582139 -71912835 + (GTGTG)n Simple_repeat Simple_repeat 1 174 0 1 825 309 259 0 60 chr15 31582210 31582395 -71912579 + (GTGTG)n Simple_repeat Simple_repeat 1 174 0 1 825 236 250 95 0 chr15 31582406 31582490 -71912484 - B4 SINE B4 -1 291 200 1 825 248 143 41 0 chr15 31582550 31582599 -71912375 - B4A SINE B4 -236 56 6 1 825 229 100 20 20 chr15 31582905 31582956 -71912018 + (CAAAAA)n Simple_repeat Simple_repeat 3 53 0 1 825 26 0 0 0 chr15 31582998 31583024 -71911950 + AT_rich Low_complexity Low_complexity 1 26 0 1 825 24 0 0 0 chr15 31583156 31583180 -71911794 + AT_rich Low_complexity Low_complexity 1 24 0 1 825 333 0 0 0 chr15 31584017 31584054 -71910920 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 825 324 0 0 0 chr15 31584443 31584479 -71910495 + (TTA)n Simple_repeat Simple_repeat 1 36 0 1 825 862 251 68 144 chr15 31586631 31587040 -71907934 - MTE2a LTR MaLR 0 379 2 1 825 480 272 82 16 chr15 31588013 31588207 -71906767 + L1MA4 LINE L1 5720 5926 -374 1 103 1834 192 61 5 chr15 31588338 31588734 -71906240 + MTD LTR MaLR 1 408 -11 1 826 260 301 0 79 chr15 31590465 31590566 -71904408 - Kanga11a DNA Tc2 -5 965 873 1 826 222 118 0 0 chr15 31591151 31591185 -71903789 + (T)n Simple_repeat Simple_repeat 1 34 0 1 826 1037 57 7 0 chr15 31591188 31591329 -71903645 - B1_Mus2 SINE Alu 0 147 6 1 826 293 64 43 0 chr15 31591444 31591491 -71903483 + (TCTCTG)n Simple_repeat Simple_repeat 6 54 0 1 826 201 39 0 0 chr15 31591491 31591517 -71903457 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 826 181 216 0 0 chr15 31591535 31591572 -71903402 + L2b LINE L2 3330 3366 -9 1 826 230 340 30 60 chr15 31592098 31592198 -71902776 + B4A SINE B4 60 156 -136 1 826 621 213 44 7 chr15 31592133 31592270 -71902704 + B1_Mur2 SINE Alu 7 148 -1 1 826 821 276 49 89 chr15 31592920 31593203 -71901771 - L1MB2 LINE L1 -301 5870 5600 1 826 3170 69 7 2 chr15 31593203 31593612 -71901362 - L1_Mus1 LINE L1 -2 6565 6155 1 826 821 276 49 89 chr15 31593612 31593777 -71901197 - L1MB2 LINE L1 -572 5599 5440 1 826 602 269 101 29 chr15 31594539 31594746 -71900228 + ID_B1 SINE B4 3 224 0 1 826 181 303 65 33 chr15 31595836 31595928 -71899046 - MIRm SINE MIR -133 143 49 1 826 345 221 61 2 chr15 31596265 31596358 -71898616 + B3A SINE B2 1 97 -119 1 826 2869 117 29 5 chr15 31596504 31596915 -71898059 - MTC LTR MaLR 0 421 1 1 826 1593 283 99 60 chr15 31597598 31598076 -71896898 - Lx9 LINE L1 -153 7491 6978 1 826 3958 120 111 89 chr15 31598076 31598797 -71896177 - RMER19A LTR ERVK 0 737 1 1 826 1593 283 99 60 chr15 31598797 31599012 -71895962 - Lx9 LINE L1 -667 6977 6765 1 826 2697 138 32 5 chr15 31599012 31599421 -71895553 + MTB_Mm LTR MaLR 2 421 0 1 826 5672 147 118 31 chr15 31599421 31600576 -71894398 + MTB_Mm-int LTR MaLR 2 1258 0 1 826 2700 119 10 17 chr15 31600576 31600986 -71893988 + MTB_Mm LTR MaLR 1 407 0 1 826 1593 283 99 60 chr15 31600986 31601056 -71893918 - Lx9 LINE L1 -880 6764 6697 1 826 1852 198 55 0 chr15 31601872 31602220 -71892754 - ORR1B2 LTR MaLR 0 367 1 1 826 227 301 0 61 chr15 31602274 31602373 -71892601 - FordPrefect DNA Tip100 0 1683 1591 1 826 26 30 0 0 chr15 31602453 31602486 -71892488 + AT_rich Low_complexity Low_complexity 1 33 0 1 826 481 286 35 35 chr15 31602489 31602717 -71892257 - Lx8 LINE L1 -4 7469 7242 1 826 240 263 92 0 chr15 31602981 31603057 -71891917 + MER91B DNA Tip100 48 130 -60 1 826 269 288 67 22 chr15 31603670 31603805 -71891169 - Lx4B LINE L1 0 7058 6918 1 826 419 273 123 15 chr15 31604034 31604164 -71890810 - ID_B1 SINE B4 -5 219 76 1 826 390 310 117 15 chr15 31604327 31604533 -71890441 + MER5C DNA MER1_type 82 308 -5 1 826 260 343 36 36 chr15 31604605 31604744 -71890230 + MLT1A0 LTR MaLR 227 365 0 1 826 441 309 75 42 chr15 31607636 31607951 -71887023 + MLT1C LTR MaLR 5 337 -130 1 826 277 361 25 43 chr15 31607947 31608109 -71886865 - RMER30 DNA MER1_type -21 181 23 1 826 295 353 0 8 chr15 31608126 31608246 -71886728 + MLT1B LTR MaLR 268 386 -4 1 826 631 303 40 0 chr15 31608268 31608443 -71886531 + B3A SINE B2 1 182 -16 1 826 5383 68 30 11 chr15 31608491 31609203 -71885771 - Lx3_Mus LINE L1 0 7009 6285 1 826 1669 124 31 61 chr15 31609228 31609554 -71885420 - ORR1A3 LTR MaLR 0 326 11 1 826 429 288 82 50 chr15 31609654 31610040 -71884934 + L1MC1 LINE L1 2809 3209 -2937 1 826 320 178 14 0 chr15 31610148 31610221 -71884753 + (TCCA)n Simple_repeat Simple_repeat 4 77 0 1 826 604 86 0 19 chr15 31610223 31610330 -71884644 + (TC)n Simple_repeat Simple_repeat 2 106 0 1 826 288 257 14 0 chr15 31610339 31610409 -71884565 - ID4_ SINE ID -11 72 2 1 826 731 263 120 16 chr15 31611834 31612056 -71882918 + L1MC1 LINE L1 5428 5666 -667 1 826 4043 86 12 19 chr15 31612056 31612627 -71882347 - RMER2 LTR ERV1 0 567 1 2 826 731 263 120 16 chr15 31612627 31612721 -71882253 + L1MC1 LINE L1 5667 5777 -556 1 826 396 0 0 0 chr15 31613255 31613299 -71881675 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 826 738 73 0 0 chr15 31613299 31613408 -71881566 + (GA)n Simple_repeat Simple_repeat 1 110 0 2 826 402 309 97 22 chr15 31613460 31613688 -71881286 + L1MC1 LINE L1 6052 6296 -37 1 826 633 181 35 0 chr15 31613692 31613808 -71881166 + RSINE1 SINE B4 3 122 -43 2 826 312 120 0 0 chr15 31613812 31613862 -71881112 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 826 1157 107 11 0 chr15 31615473 31615650 -71879324 + B2_Mm1t SINE B2 11 189 -4 2 826 2050 170 63 41 chr15 31616799 31616862 -71878112 - MTC LTR MaLR 0 421 367 2 826 2295 138 49 49 chr15 31616862 31617267 -71877707 + RLTR44A LTR ERVK 1 405 0 2 826 2050 170 63 41 chr15 31617267 31617615 -71877359 - MTC LTR MaLR -55 366 1 2 826 403 247 10 0 chr15 31617615 31617712 -71877262 - ID_B1 SINE B4 -32 192 95 2 826 1461 218 126 26 chr15 31617754 31618182 -71876792 + RMER19C LTR ERVK 141 611 0 2 826 429 226 69 0 chr15 31619019 31619121 -71875853 - PB1D10 SINE Alu -2 115 7 2 826 251 265 77 19 chr15 31619152 31619256 -71875718 - MLT1B LTR MaLR -239 151 42 2 826 924 146 0 0 chr15 31619754 31620086 -71874888 + (TG)n Simple_repeat Simple_repeat 1 332 0 2 826 869 270 14 66 chr15 31620112 31620398 -71874576 - B4 SINE B4 -20 272 2 2 826 345 318 143 20 chr15 31623006 31623202 -71871772 + MLT1G1 LTR MaLR 82 301 -278 2 826 1955 173 55 13 chr15 31623252 31623633 -71871341 + MTD LTR MaLR 1 397 -22 2 826 738 256 181 5 chr15 31624340 31624471 -71870503 - Lx9 LINE L1 0 7644 7484 2 826 462 36 0 0 chr15 31624471 31624527 -71870447 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 826 738 256 181 5 chr15 31624527 31624776 -71870198 - Lx9 LINE L1 -161 7483 7198 2 826 449 171 0 0 chr15 31625558 31625634 -71869340 + ORR1A3-int LTR MaLR 89 164 -1799 2 826 991 181 6 15 chr15 31625626 31625828 -71869146 - ORR1A1 LTR MaLR -161 185 1 2 826 231 208 24 24 chr15 31626044 31626167 -71868807 + GA-rich Low_complexity Low_complexity 3 125 0 2 826 357 62 0 0 chr15 31626353 31626401 -71868573 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 826 236 227 0 70 chr15 31626451 31626522 -71868452 + CT-rich Low_complexity Low_complexity 5 70 0 2 826 977 101 0 7 chr15 31626526 31626675 -71868299 + (TTTC)n Simple_repeat Simple_repeat 2 149 0 2 826 35985 76 2 11 chr15 31626683 31633032 -71861942 - L1Md_F2 LINE L1 -11 6571 301 2 826 335 233 19 10 chr15 31633020 31633124 -71861850 - L1VL1 LINE L1 -6127 295 191 2 826 283 252 61 38 chr15 31633270 31633402 -71861572 - HAL1 LINE L1 -147 2360 2226 2 826 5150 65 8 11 chr15 31633829 31633849 -71861125 - L1Md_F2 LINE L1 0 6582 6560 2 826 180 0 0 0 chr15 31633849 31633869 -71861105 + (TTA)n Simple_repeat Simple_repeat 1 20 0 2 826 5150 65 8 11 chr15 31633869 31634513 -71860461 - L1Md_F2 LINE L1 -23 6559 5920 2 826 761 258 90 37 chr15 31635489 31635756 -71859218 + MLT1A0 LTR MaLR 87 408 0 2 826 345 289 143 69 chr15 31636127 31636554 -71858420 + L1MC4 LINE L1 7347 7794 -248 2 826 2081 92 35 87 chr15 31636554 31636898 -71858076 - ORR1A3 LTR MaLR 0 326 1 2 826 345 289 143 69 chr15 31636898 31637118 -71857856 + L1MC4 LINE L1 7795 8042 0 2 826 3808 153 202 20 chr15 31637390 31638259 -71856715 - RLTR25B LTR ERVK 0 1028 1 2 826 1295 254 20 11 chr15 31638277 31638635 -71856339 + MTE2b LTR MaLR 19 379 0 2 826 932 219 79 24 chr15 31638659 31638911 -71856063 - MTEa LTR MaLR -4 375 110 2 826 442 83 28 0 chr15 31640212 31640284 -71854690 + (TTTA)n Simple_repeat Simple_repeat 3 76 0 2 826 623 217 134 16 chr15 31640285 31640472 -71854502 - ID_B1 SINE B4 -1 223 15 2 826 275 255 56 19 chr15 31640577 31640685 -71854289 + MLT1C LTR MaLR 61 172 -295 2 826 339 315 64 46 chr15 31640741 31640914 -71854060 + MLT1C LTR MaLR 282 457 -10 2 826 192 152 0 0 chr15 31641567 31641600 -71853374 + C-rich Low_complexity Low_complexity 1 33 0 2 826 411 78 0 0 chr15 31642122 31642186 -71852788 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 826 584 167 19 0 chr15 31642213 31642321 -71852653 - B3A SINE B2 -88 110 1 2 826 1131 241 37 123 chr15 31642334 31642991 -71851983 - L1MB5 LINE L1 -58 6116 5526 2 826 1230 93 0 0 chr15 31643955 31644312 -71850662 + (GGGAGA)n Simple_repeat Simple_repeat 1 357 0 2 826 226 276 90 22 chr15 31644703 31644792 -71850182 - MLT1A1 LTR MaLR -19 389 295 2 826 2778 48 140 3 chr15 31644904 31645262 -71849712 + MTB_Mm LTR MaLR 1 407 0 2 826 180 328 0 17 chr15 31645606 31645665 -71849309 + MIR3 SINE MIR 1 58 -150 2 826 333 0 0 0 chr15 31647503 31647540 -71847434 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 826 445 312 21 28 chr15 31647556 31647701 -71847273 - RSINE1 SINE B4 -19 146 3 2 826 2586 71 3 0 chr15 31648101 31648425 -71846549 + ORR1A2 LTR MaLR 1 325 -2 2 826 4664 67 3 13 chr15 31648598 31649220 -71845754 + L1_Mus3 LINE L1 6017 6632 -6 2 826 994 116 0 0 chr15 31649305 31649460 -71845514 - URR1A DNA MER1_type 0 226 72 2 826 403 294 20 14 chr15 31649595 31649743 -71845231 - B1_Mur1 SINE Alu 0 149 1 2 826 270 176 0 0 chr15 31649967 31650018 -71844956 + (CATA)n Simple_repeat Simple_repeat 2 52 0 2 826 200 135 0 26 chr15 31650443 31650481 -71844493 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 826 1760 202 108 70 chr15 31650505 31651016 -71843958 - RMER5 LTR ERV1 0 534 5 2 826 495 0 0 0 chr15 31651037 31651092 -71843882 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 826 1146 72 0 0 chr15 31651507 31651660 -71843314 + (TCTA)n Simple_repeat Simple_repeat 4 156 0 2 826 261 312 35 26 chr15 31653671 31653786 -71841188 + MLT1H LTR MaLR 381 496 -53 2 826 226 286 0 45 chr15 31653932 31654020 -71840954 + MLT1E LTR MaLR 46 129 -450 2 826 328 250 75 19 chr15 31655007 31655113 -71839861 + PB1D10 SINE Alu 5 116 -1 2 826 522 203 0 0 chr15 31655250 31655373 -71839601 + GA-rich Low_complexity Low_complexity 2 124 0 2 826 334 283 60 129 chr15 31655409 31655726 -71839248 - MLT1D LTR MaLR -165 340 46 2 826 3070 35 14 0 chr15 31655854 31656223 -71838751 + L1Md_F2 LINE L1 5212 5585 -298 2 826 8130 57 2 1 chr15 31656224 31657219 -71837755 + L1Md_F2 LINE L1 5587 6582 0 2 826 259 264 29 11 chr15 31657279 31657383 -71837591 - B3 SINE B2 -85 113 7 2 826 31 58 0 0 chr15 31657640 31657692 -71837282 + AT_rich Low_complexity Low_complexity 1 52 0 2 826 669 277 142 18 chr15 31658072 31658410 -71836564 + MLT1E LTR MaLR 135 514 -139 2 826 241 323 86 25 chr15 31658861 31659023 -71835951 - MLT1H-int LTR MaLR -1061 348 177 2 826 986 232 102 25 chr15 31659428 31659702 -71835272 - Lx8 LINE L1 -7 7466 7172 2 826 262 300 8 32 chr15 31660395 31660519 -71834455 - Lx8 LINE L1 0 7473 7353 2 826 27 0 0 0 chr15 31660560 31660587 -71834387 + AT_rich Low_complexity Low_complexity 1 27 0 2 826 2203 45 0 0 chr15 31662787 31663051 -71831923 + L1Md_T LINE L1 6318 6581 -1 2 826 205 298 70 9 chr15 31663434 31663549 -71831425 - L2b LINE L2 -11 3364 3243 2 826 291 200 0 0 chr15 31663826 31663876 -71831098 - Lx8 LINE L1 -841 6632 6583 2 826 220 299 49 49 chr15 31665181 31665304 -71829670 + C-rich Low_complexity Low_complexity 3 125 0 2 826 229 227 105 13 chr15 31666025 31666101 -71828873 - PB1D10 SINE Alu -10 107 25 2 826 33 0 0 0 chr15 31666265 31666298 -71828676 + AT_rich Low_complexity Low_complexity 1 33 0 2 826 793 165 14 36 chr15 31666300 31666438 -71828536 - B1_Mus2 SINE Alu -12 135 1 2 826 578 305 155 14 chr15 31666463 31666825 -71828149 + MLT2D LTR ERVL 1 413 -1 2 826 208 268 61 46 chr15 31666875 31666986 -71827988 - MIRc SINE MIR -133 129 10 2 826 1187 109 40 6 chr15 31667139 31667315 -71827659 + B2_Mm2 SINE B2 3 184 -11 2 826 303 87 0 21 chr15 31667364 31667411 -71827563 + B2_Mm2 SINE B2 51 96 -99 2 826 26 0 0 0 chr15 31667441 31667467 -71827507 + AT_rich Low_complexity Low_complexity 1 26 0 2 826 723 258 235 29 chr15 31668070 31668381 -71826593 - MTE2b LTR MaLR 0 379 5 2 826 2170 156 63 79 chr15 31668413 31668983 -71825991 + RLTR31_Mm LTR ERVK 1 561 0 2 826 7187 130 33 9 chr15 31669518 31671216 -71823758 - Lx LINE L1 0 6654 4941 2 826 180 176 0 0 chr15 31671356 31671390 -71823584 + (TTA)n Simple_repeat Simple_repeat 1 34 0 2 826 183 246 46 0 chr15 31673083 31673148 -71821826 - L2 LINE L2 -955 2464 2397 2 826 731 259 6 40 chr15 31673365 31673437 -71821537 + B3A SINE B2 2 68 -130 2 826 1797 223 34 38 chr15 31673437 31673944 -71821030 + RLTR16 LTR ERVK 1 505 0 2 826 731 259 6 40 chr15 31673944 31674044 -71820930 + B3A SINE B2 69 168 -30 2 826 447 238 143 0 chr15 31674191 31674317 -71820657 + B1F SINE Alu 6 149 0 2 826 180 111 0 0 chr15 31674322 31674349 -71820625 + (CAAG)n Simple_repeat Simple_repeat 1 27 0 2 826 185 0 40 0 chr15 31675429 31675454 -71819520 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 826 723 161 0 0 chr15 31675541 31675678 -71819296 + (CA)n Simple_repeat Simple_repeat 2 138 0 2 826 279 106 44 56 chr15 31675678 31675768 -71819206 + (TA)n Simple_repeat Simple_repeat 2 90 0 2 826 378 303 82 0 chr15 31675782 31675904 -71819070 + B1F SINE Alu 13 144 -5 2 826 260 275 58 0 chr15 31675938 31676007 -71818967 + ID4_ SINE ID 6 78 -5 2 826 642 26 0 0 chr15 31676024 31676100 -71818874 + (TC)n Simple_repeat Simple_repeat 1 76 0 2 826 867 137 0 0 chr15 31676100 31676275 -71818699 + (CA)n Simple_repeat Simple_repeat 2 176 0 2 826 185 222 0 16 chr15 31676335 31676399 -71818575 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 2 826 321 305 52 61 chr15 31676988 31677359 -71817615 - RLTR12B LTR ERVK -250 278 13 2 826 585 76 0 0 chr15 31677845 31677924 -71817050 + (TTCC)n Simple_repeat Simple_repeat 2 80 0 2 826 486 280 59 30 chr15 31679457 31679747 -71815227 + L1MA9 LINE L1 5703 6034 -278 3 826 507 17 0 0 chr15 31679819 31679879 -71815095 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 826 213 94 0 0 chr15 31679970 31680002 -71814972 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 826 360 111 0 0 chr15 31680093 31680156 -71814818 + (CA)n Simple_repeat Simple_repeat 1 63 0 3 826 3230 164 191 51 chr15 31680813 31681067 -71813907 + MTC-int LTR MaLR 267 546 -712 3 826 982 207 246 87 chr15 31681067 31681527 -71813447 - MT2A LTR ERVL 0 533 1 3 826 3230 164 191 51 chr15 31681527 31681978 -71812996 + MTC-int LTR MaLR 547 1097 -161 3 826 1103 128 38 29 chr15 31681978 31682187 -71812787 - Lx LINE L1 0 6654 6444 3 826 3230 164 191 51 chr15 31682187 31682350 -71812624 + MTC-int LTR MaLR 1098 1258 0 3 826 2142 168 25 53 chr15 31682350 31682549 -71812425 + MTC LTR MaLR 1 210 -211 3 826 1471 123 68 32 chr15 31682549 31682827 -71812147 + Lx LINE L1 6366 6653 -1 3 826 2142 168 25 53 chr15 31682827 31683060 -71811914 + MTC LTR MaLR 211 421 0 3 826 246 282 0 93 chr15 31683079 31683165 -71811809 - ID4 SINE ID 0 83 6 3 826 261 364 0 50 chr15 31683174 31683313 -71811661 - ID_B1 SINE B4 -7 217 86 3 826 396 0 0 0 chr15 31684195 31684239 -71810735 + (TC)n Simple_repeat Simple_repeat 2 45 0 3 826 297 0 0 0 chr15 31684260 31684293 -71810681 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 826 4513 52 25 0 chr15 31684412 31684975 -71809999 + L1Md_F3 LINE L1 6008 6584 0 3 826 432 151 139 0 chr15 31685054 31685140 -71809834 + MTC LTR MaLR 1 98 -323 3 826 2995 123 61 6 chr15 31685140 31685615 -71809359 + L1Md_F2 LINE L1 396 896 -5723 3 826 3250 20 2 69 chr15 31685615 31686033 -71808941 + RLTR10 LTR ERVK 1 390 0 3 826 17609 23 3 0 chr15 31686078 31688046 -71806928 + RLTR10-int LTR ERVK 11 1984 -3 3 826 3250 20 2 69 chr15 31688048 31688466 -71806508 + RLTR10 LTR ERVK 1 390 0 3 826 33257 76 2 1 chr15 31688468 31693175 -71801799 + L1Md_F2 LINE L1 778 5589 -297 3 826 7620 49 42 0 chr15 31693175 31694059 -71800915 + L1Md_F2 LINE L1 5590 6482 -103 3 826 183 42 0 0 chr15 31694059 31694083 -71800891 + (TGGG)n Simple_repeat Simple_repeat 4 27 0 3 826 7620 49 42 0 chr15 31694083 31694142 -71800832 + L1Md_F2 LINE L1 6483 6572 -13 3 826 305 127 159 0 chr15 31694175 31694238 -71800736 + RLTR25B LTR ERVK 571 643 -385 3 826 6008 86 0 7 chr15 31694253 31695118 -71799856 - Lx3A LINE L1 -1036 5945 5091 3 826 1622 127 11 4 chr15 31695116 31695384 -71799590 + Lx3_Mus LINE L1 5949 6218 -791 3 826 1752 125 48 10 chr15 31695384 31695675 -71799299 + Lx3_Mus LINE L1 6707 7008 -1 3 826 712 148 21 36 chr15 31695681 31695821 -71799153 + RLTR25B LTR ERVK 615 752 -276 3 826 749 164 43 0 chr15 31695795 31695935 -71799039 + RMER19B LTR ERVK 757 902 0 3 826 1626 181 59 27 chr15 31695935 31696300 -71798674 + RLTR12B LTR ERVK 152 528 0 3 826 4218 158 61 31 chr15 31696300 31697213 -71797761 - L1_Mur3 LINE L1 -3634 2246 1306 3 826 1569 84 117 4 chr15 31697360 31697624 -71797350 - MTB LTR MaLR -106 294 1 3 826 292 374 0 0 chr15 31698031 31698130 -71796844 - PB1D7 SINE Alu -14 106 8 3 826 237 319 123 59 chr15 31700672 31700778 -71794196 - L2 LINE L2 -490 2929 2806 3 826 477 0 0 0 chr15 31700778 31700831 -71794143 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 3 826 3338 64 7 2 chr15 31700832 31701257 -71793717 - L1_Mus1 LINE L1 -2 6565 6139 3 826 237 319 123 59 chr15 31701257 31701351 -71793623 - L2 LINE L2 -614 2805 2714 3 826 2319 233 67 6 chr15 31701491 31702014 -71792960 - Lx8 LINE L1 -504 6969 6415 3 826 405 39 0 0 chr15 31702401 31702452 -71792522 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 826 258 260 128 59 chr15 31702456 31702558 -71792416 - B4A SINE B4 -4 288 180 3 826 303 248 49 7 chr15 31703774 31703916 -71791058 + (TCTA)n Simple_repeat Simple_repeat 2 149 0 3 826 1050 122 0 0 chr15 31703923 31704071 -71790903 - B1_Mus1 SINE Alu 0 148 1 3 826 2345 141 49 23 chr15 31704092 31704150 -71790824 - BGLII_B LTR ERVK 0 441 383 3 826 301 62 0 0 chr15 31704150 31704198 -71790776 - L1Md_F2 LINE L1 -8 6574 6527 3 826 2345 141 49 23 chr15 31704198 31704569 -71790405 - BGLII_B LTR ERVK -59 382 1 3 826 235 254 0 0 chr15 31704620 31704653 -71790321 + polypyrimidine Low_complexity Low_complexity 25 57 0 3 826 1102 112 11 0 chr15 31704653 31704831 -71790143 + (TC)n Simple_repeat Simple_repeat 1 180 0 3 826 235 254 0 0 chr15 31704831 31704852 -71790122 + polypyrimidine Low_complexity Low_complexity 4 24 0 3 826 1029 274 52 62 chr15 31705249 31705635 -71789339 + MTD LTR MaLR 38 419 0 3 826 24 32 0 0 chr15 31705818 31705849 -71789125 + AT_rich Low_complexity Low_complexity 1 31 0 3 826 216 97 0 0 chr15 31706005 31706036 -71788938 + (GAGAA)n Simple_repeat Simple_repeat 5 35 0 3 826 37 62 0 0 chr15 31707125 31707190 -71787784 + AT_rich Low_complexity Low_complexity 1 65 0 3 826 31722 105 6 12 chr15 31707190 31713072 -71781902 - L1_Mus1 LINE L1 0 6570 728 3 826 509 232 40 19 chr15 31713080 31713239 -71781735 - L1_Mus1 LINE L1 -5813 806 544 3 826 370 334 16 36 chr15 31713266 31713544 -71781430 - L1VL1 LINE L1 -6022 400 4 3 826 261 0 0 0 chr15 31713863 31713892 -71781082 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3 826 570 284 88 13 chr15 31713918 31714146 -71780828 + RMER5 LTR ERV1 38 282 -252 3 826 750 220 146 69 chr15 31714147 31714435 -71780539 + RLTR20C LTR ERVK 3 312 -222 3 826 414 0 0 0 chr15 31714459 31714505 -71780469 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 826 272 174 0 138 chr15 31714505 31714586 -71780388 + RLTR20C LTR ERVK 481 577 -1 3 826 358 289 126 6 chr15 31714589 31714756 -71780218 + RMER5 LTR ERV1 278 464 -70 3 826 998 83 14 0 chr15 31715195 31715340 -71779634 + (TTTC)n Simple_repeat Simple_repeat 1 147 0 3 826 239 333 21 14 chr15 31715885 31716025 -71778949 + MLT1A1 LTR MaLR 268 408 0 3 826 1832 263 38 24 chr15 31717026 31717529 -71777445 - Lx9 LINE L1 -457 7187 6678 3 826 21 0 0 0 chr15 31717546 31717567 -71777407 + AT_rich Low_complexity Low_complexity 1 21 0 3 826 781 282 19 0 chr15 31717568 31717777 -71777197 - B3 SINE B2 -3 213 1 3 826 21 0 0 0 chr15 31717825 31717846 -71777128 + AT_rich Low_complexity Low_complexity 1 21 0 3 826 244 304 62 42 chr15 31718577 31718721 -71776253 + ORR1E LTR MaLR 51 197 -162 3 826 423 106 0 0 chr15 31718860 31718926 -71776048 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 826 220 319 87 0 chr15 31718927 31718996 -71775978 - B1F1 SINE Alu -9 140 66 3 826 245 242 29 57 chr15 31719320 31719390 -71775584 + MLT1A LTR MaLR 1 68 -306 3 827 375 295 30 37 chr15 31719453 31719587 -71775387 + MLT1A LTR MaLR 223 355 -19 3 827 1432 189 111 20 chr15 31719588 31719938 -71775036 - ORR1C2 LTR MaLR 0 384 3 3 827 34331 80 10 2 chr15 31720528 31726708 -71768266 - L1Md_F2 LINE L1 0 6582 356 3 827 432 0 0 0 chr15 31726758 31726806 -71768168 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 827 1723 181 49 17 chr15 31728994 31729342 -71765632 + ORR1D1 LTR MaLR 3 361 -13 3 827 718 312 35 62 chr15 31729640 31729978 -71764996 + MT2A LTR ERVL 100 428 -105 3 827 360 0 0 0 chr15 31730075 31730115 -71764859 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 827 244 230 71 100 chr15 31730330 31730470 -71764504 + MLT1D LTR MaLR 1 136 -369 3 827 481 286 0 9 chr15 31730791 31730897 -71764077 - PB1D7 SINE Alu -10 110 6 3 827 717 274 111 16 chr15 31732641 31732893 -71762081 + B4A SINE B4 1 276 -16 3 827 429 20 0 0 chr15 31732929 31732979 -71761995 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 827 309 212 112 96 chr15 31733419 31733544 -71761430 - PB1 SINE Alu 0 127 1 3 827 267 103 0 0 chr15 31733663 31733702 -71761272 + (GGA)n Simple_repeat Simple_repeat 3 41 0 3 827 781 250 0 53 chr15 31735099 31735306 -71759668 - B3A SINE B2 -2 196 1 3 827 252 184 0 0 chr15 31736401 31736450 -71758524 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 3 827 432 0 0 0 chr15 31736451 31736499 -71758475 + (TCTA)n Simple_repeat Simple_repeat 4 51 0 3 827 335 220 11 0 chr15 31736669 31736760 -71758214 + (TA)n Simple_repeat Simple_repeat 1 92 0 3 827 423 0 0 0 chr15 31740220 31740267 -71754707 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 3 827 313 164 9 9 chr15 31740287 31740324 -71754650 + polypyrimidine Low_complexity Low_complexity 69 106 0 3 827 1052 73 11 11 chr15 31740324 31740503 -71754471 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 3 827 313 164 9 9 chr15 31740503 31740570 -71754404 + CT-rich Low_complexity Low_complexity 3 68 0 3 827 996 63 28 6 chr15 31740574 31740750 -71754224 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 3 827 250 173 56 37 chr15 31741104 31741158 -71753816 - B3 SINE B2 -156 60 6 3 827 554 333 152 18 chr15 31741546 31742039 -71752935 - Arthur1 DNA Tip100 -2907 1040 482 3 827 189 0 0 0 chr15 31742050 31742071 -71752903 + (TTCTG)n Simple_repeat Simple_repeat 3 23 0 3 827 679 282 57 18 chr15 31742085 31742312 -71752662 - MLT1B LTR MaLR -29 361 126 3 827 306 143 0 31 chr15 31742691 31742756 -71752218 + MLT1A1 LTR MaLR 321 383 -25 3 827 432 0 0 0 chr15 31742792 31742840 -71752134 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 827 927 85 0 0 chr15 31743427 31743557 -71751417 + (TA)n Simple_repeat Simple_repeat 2 131 0 3 827 245 286 174 45 chr15 31743770 31743902 -71751072 + MLT1A LTR MaLR 184 332 -42 3 827 574 199 42 7 chr15 31743930 31744072 -71750902 - B1_Mur1 SINE Alu -1 148 2 3 827 273 164 27 14 chr15 31744245 31744319 -71750655 + GA-rich Low_complexity Low_complexity 2 76 0 3 827 684 83 0 0 chr15 31744319 31744415 -71750559 + (TG)n Simple_repeat Simple_repeat 2 97 0 3 827 21 0 0 0 chr15 31745170 31745191 -71749783 + AT_rich Low_complexity Low_complexity 1 21 0 3 827 180 111 0 0 chr15 31745620 31745647 -71749327 + (TTA)n Simple_repeat Simple_repeat 2 28 0 3 827 1452 159 39 0 chr15 31745650 31745908 -71749066 - Lx3B LINE L1 -1 6972 6705 3 827 306 339 8 0 chr15 31745932 31746053 -71748921 - L1MA6 LINE L1 -10 6290 6169 3 827 322 288 71 7 chr15 31746295 31746435 -71748539 - L1MA5 LINE L1 -2 6298 6150 3 827 1926 130 0 89 chr15 31746950 31747330 -71747644 - ORR1B1 LTR MaLR -8 386 41 3 827 956 321 86 19 chr15 31748238 31748669 -71746305 - MTE-int LTR MaLR -27 1553 1094 3 827 1347 211 46 25 chr15 31749358 31749684 -71745290 + ORR1D1 LTR MaLR 2 334 -40 3 827 3067 54 16 0 chr15 31750039 31750411 -71744563 - L1_Mus1 LINE L1 0 6567 6190 3 827 270 300 39 34 chr15 31750620 31750773 -71744201 + MIR SINE MIR 112 268 0 3 827 805 310 129 25 chr15 31751626 31752069 -71742905 - Charlie4a DNA MER1_type -2 506 18 4 827 219 300 0 16 chr15 31753432 31753493 -71741481 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 827 952 286 26 10 chr15 31754101 31754412 -71740562 - L1MA4 LINE L1 -373 5927 5612 4 827 326 250 26 13 chr15 31754500 31754577 -71740397 - MER20 DNA MER1_type -45 174 97 4 827 297 75 0 0 chr15 31754592 31754632 -71740342 + (CAA)n Simple_repeat Simple_repeat 3 42 0 4 827 643 304 61 34 chr15 31754868 31755358 -71739616 - L1M3 LINE L1 -395 5776 5279 4 827 4199 206 39 32 chr15 31756698 31757876 -71737098 - RMER1A Other Other 0 1030 41 4 827 310 294 108 32 chr15 31758472 31758630 -71736344 + MER106A DNA MER1_type 65 234 -2 4 827 753 312 28 38 chr15 31760287 31760577 -71734397 + B4A SINE B4 6 292 0 4 827 465 266 24 129 chr15 31761986 31762241 -71732733 + Lx9 LINE L1 6583 6953 -691 4 827 453 19 0 0 chr15 31763073 31763127 -71731847 + (TATG)n Simple_repeat Simple_repeat 1 54 0 4 827 318 191 0 16 chr15 31763130 31763194 -71731780 - ID4_ SINE ID -14 69 7 4 827 7858 53 2 3 chr15 31763223 31764187 -71730787 + L1Md_F2 LINE L1 5616 6578 -4 4 827 6248 71 42 1 chr15 31764229 31765049 -71729925 + L1_Mus3 LINE L1 5783 6635 -3 4 827 441 0 0 0 chr15 31765067 31765116 -71729858 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 827 440 291 34 0 chr15 31765117 31765234 -71729740 - RSINE1 SINE B4 -41 124 4 4 827 508 238 38 0 chr15 31765276 31765381 -71729593 - B1_Mur4 SINE Alu -20 130 22 4 827 278 331 29 43 chr15 31765400 31765539 -71729435 - B1F1 SINE Alu -8 141 5 4 827 249 33 0 0 chr15 31765874 31765904 -71729070 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 827 426 286 83 127 chr15 31765919 31766219 -71728755 - B4A SINE B4 -4 288 2 4 827 586 256 29 18 chr15 31766560 31766731 -71728243 + MLT2B1 LTR ERVL 30 202 -318 4 827 1244 78 5 10 chr15 31766788 31767006 -71727968 + (TCCA)n Simple_repeat Simple_repeat 1 216 0 4 827 222 236 27 18 chr15 31767087 31767199 -71727775 + CT-rich Low_complexity Low_complexity 3 115 0 4 827 1449 160 147 14 chr15 31767895 31768262 -71726712 - Lx9 LINE L1 -6 7638 7223 4 827 2632 211 79 42 chr15 31768263 31768906 -71726068 - RMER1B Other Other -4 1062 396 4 827 1352 201 8 0 chr15 31768904 31769143 -71725831 - Lx9 LINE L1 -406 7238 6998 4 827 729 253 166 79 chr15 31769779 31770144 -71724830 - L1_Mur3 LINE L1 -479 5818 5360 4 827 693 0 0 0 chr15 31770144 31770221 -71724753 + (TCTA)n Simple_repeat Simple_repeat 2 78 0 4 827 729 310 73 62 chr15 31770221 31770250 -71724724 - L1_Mur3 LINE L1 -521 5359 5340 4 827 258 32 0 0 chr15 31770250 31770281 -71724693 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 827 729 310 73 62 chr15 31770281 31770732 -71724242 - L1_Mur3 LINE L1 -541 5339 4867 4 827 811 261 9 42 chr15 31773956 31774168 -71720806 + B3 SINE B2 5 209 -7 4 827 379 304 85 26 chr15 31774202 31774391 -71720583 - MLT1C LTR MaLR 0 467 268 4 827 252 318 32 0 chr15 31774710 31774773 -71720201 + MER5A DNA MER1_type 1 65 -124 4 827 1029 245 63 36 chr15 31774809 31775282 -71719692 + Lx9 LINE L1 7049 7624 -20 4 827 853 249 113 8 chr15 31775540 31775787 -71719187 - MTEa LTR MaLR -2 377 105 4 827 2191 204 92 60 chr15 31778881 31779688 -71715286 + RMER19B LTR ERVK 1 890 -12 4 827 280 77 39 0 chr15 31780328 31780380 -71714594 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 827 731 189 30 8 chr15 31780663 31780796 -71714178 - B1_Mur2 SINE Alu -3 146 11 4 827 356 190 0 102 chr15 31780721 31780809 -71714165 - MT2B LTR ERVL -361 240 162 4 827 389 286 36 36 chr15 31781019 31781186 -71713788 - MLT1B LTR MaLR -223 167 1 4 827 3991 65 4 45 chr15 31781249 31781798 -71713176 - L1_Mus3 LINE L1 -1 6637 6112 4 827 324 175 0 0 chr15 31782568 31782631 -71712343 + GA-rich Low_complexity Low_complexity 2 64 0 4 827 398 301 53 0 chr15 31783349 31783462 -71711512 - PB1D9 SINE Alu -1 119 1 4 827 388 297 14 61 chr15 31783593 31783807 -71711167 - MLT2D LTR ERVL -154 260 58 4 827 198 91 0 0 chr15 31785352 31785385 -71709589 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 4 827 282 56 0 0 chr15 31786378 31786414 -71708560 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 827 51 83 0 0 chr15 31786501 31786622 -71708352 + AT_rich Low_complexity Low_complexity 1 121 0 4 827 336 83 0 0 chr15 31786622 31786670 -71708304 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 827 1109 74 0 0 chr15 31786756 31786891 -71708083 + B1_Mus1 SINE Alu 2 136 -12 4 827 423 0 0 0 chr15 31786892 31786939 -71708035 + (CAA)n Simple_repeat Simple_repeat 2 48 0 4 827 3263 218 37 21 chr15 31786975 31787646 -71707328 - Lx5 LINE L1 -5 7045 6364 4 827 214 295 9 128 chr15 31787675 31787784 -71707190 - RSINE1 SINE B4 -68 97 2 4 827 335 160 70 13 chr15 31787861 31787954 -71707020 - Lx7 LINE L1 -511 5780 5662 4 827 204 228 0 0 chr15 31788650 31788707 -71706267 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 827 1038 258 65 43 chr15 31788713 31789110 -71705864 - Lx9 LINE L1 -365 5938 5533 4 827 3274 223 50 34 chr15 31789120 31789929 -71705045 - L1_Mur3 LINE L1 -51 5829 5007 4 827 531 0 0 0 chr15 31789929 31789988 -71704986 + (CTATT)n Simple_repeat Simple_repeat 4 62 0 4 827 3274 223 50 34 chr15 31789988 31790066 -71704908 - L1_Mur3 LINE L1 -874 5006 4929 4 827 846 270 126 17 chr15 31790058 31790471 -71704503 + Lx7 LINE L1 6602 7036 -437 4 827 501 251 76 57 chr15 31790501 31791027 -71703947 - Lx9 LINE L1 -406 5474 5038 4 827 3616 47 11 7 chr15 31791045 31791499 -71703475 + L1Md_F2 LINE L1 6126 6581 -1 4 827 227 263 20 20 chr15 31791528 31791629 -71703345 + (TA)n Simple_repeat Simple_repeat 1 101 0 4 827 1077 128 28 103 chr15 31791629 31791786 -71703188 - Lx9 LINE L1 -127 7517 7382 4 827 3691 96 126 0 chr15 31791786 31792320 -71702654 - MT2B LTR ERVL 0 601 1 4 827 1077 128 28 103 chr15 31792320 31792414 -71702560 - Lx9 LINE L1 -263 7381 7285 4 827 328 289 0 12 chr15 31792707 31792791 -71702183 - PB1D10 SINE Alu -25 92 10 4 827 1802 309 78 32 chr15 31792859 31794178 -71700796 - L1M2 LINE L1 -1304 4839 3350 4 827 4302 44 21 0 chr15 31794178 31794697 -71700277 - L1_Mus1 LINE L1 0 6567 6038 4 827 1294 306 94 30 chr15 31794697 31795252 -71699722 - L1M2 LINE L1 -2531 3349 2869 4 827 1704 299 65 23 chr15 31795258 31796275 -71698699 + L1_Mur3 LINE L1 4648 5746 -557 4 827 473 349 18 0 chr15 31796275 31796444 -71698530 + B4A SINE B4 5 176 -116 4 827 5144 43 2 11 chr15 31796445 31797077 -71697897 + L1Md_F2 LINE L1 5957 6582 0 4 827 353 318 110 72 chr15 31797673 31797937 -71697037 + B4 SINE B4 1 274 -18 4 827 567 29 0 0 chr15 31797964 31798033 -71696941 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 827 686 157 44 6 chr15 31798306 31798466 -71696508 + (CATATA)n Simple_repeat Simple_repeat 4 169 0 4 827 520 287 96 14 chr15 31798609 31798828 -71696146 + MER89 LTR ERV1 274 510 -49 4 827 1195 75 0 0 chr15 31801506 31801653 -71693321 - B1_Mus2 SINE Alu 0 147 1 4 827 245 284 14 0 chr15 31802396 31802470 -71692504 + G-rich Low_complexity Low_complexity 6 80 0 4 827 2778 92 0 3 chr15 31802780 31803160 -71691814 - L1_Mus4 LINE L1 -10 6626 6248 4 827 231 363 14 77 chr15 31803455 31803676 -71691298 - RMER4A LTR ERVK -253 213 7 4 827 556 243 61 56 chr15 31804348 31804544 -71690430 - B3A SINE B2 0 198 2 4 827 447 301 81 49 chr15 31804612 31804919 -71690055 + L1MC1 LINE L1 6005 6321 -12 4 827 630 358 57 30 chr15 31805690 31806059 -71688915 + MTE2b LTR MaLR 1 379 0 4 827 1002 175 92 5 chr15 31806304 31806567 -71688407 + MTC LTR MaLR 1 319 -102 4 827 6065 41 0 0 chr15 31806637 31807346 -71687628 - L1Md_T LINE L1 0 6582 5874 4 827 1099 179 47 47 chr15 31807346 31807599 -71687375 - RMER1C Other Other -8 1334 1082 4 827 473 248 8 0 chr15 31807604 31807725 -71687249 + MTC LTR MaLR 298 419 0 4 827 4300 175 157 13 chr15 31807736 31808820 -71686154 + MTC-int LTR MaLR 17 1256 -2 4 827 1961 190 63 37 chr15 31808822 31809232 -71685742 + MTC LTR MaLR 1 421 0 4 827 287 250 88 0 chr15 31810170 31810250 -71684724 + MLT1B LTR MaLR 288 374 -16 4 827 231 301 71 67 chr15 31812599 31812809 -71682165 - Lx8 LINE L1 -2 7471 7261 4 827 1067 165 71 153 chr15 31812925 31813305 -71681669 + Lx9 LINE L1 7288 7636 -8 4 827 415 319 33 77 chr15 31814020 31814203 -71680771 - B4A SINE B4 -116 176 2 4 827 285 29 0 0 chr15 31814447 31814481 -71680493 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 827 1626 185 26 43 chr15 31814775 31815125 -71679849 - Lx7 LINE L1 -333 7363 7020 4 827 314 309 116 81 chr15 31815949 31816371 -71678603 - MLT1H2 LTR MaLR -4 485 49 4 827 230 350 8 41 chr15 31816552 31816674 -71678300 - MLT2B4 LTR ERVL -402 154 37 4 827 226 211 0 19 chr15 31817243 31817296 -71677678 - Charlie11 DNA MER1_type -962 1234 1183 4 827 681 36 45 18 chr15 31817662 31817774 -71677200 - L1Md_F3 LINE L1 0 6584 6470 4 827 36585 67 4 10 chr15 31817780 31823878 -71671096 - L1Md_F2 LINE L1 -19 6563 505 4 827 362 289 0 10 chr15 31824062 31824173 -71670801 - ID4 SINE ID -44 108 1 4 827 448 267 106 11 chr15 31826243 31826483 -71668491 + MTD LTR MaLR 5 347 -72 4 827 689 270 73 66 chr15 31826789 31827078 -71667896 - B4A SINE B4 0 292 2 4 827 21 0 0 0 chr15 31827221 31827242 -71667732 + GC_rich Low_complexity Low_complexity 1 21 0 4 827 342 0 0 0 chr15 31829369 31829407 -71665567 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 827 408 153 0 0 chr15 31829411 31829496 -71665478 + GA-rich Low_complexity Low_complexity 2 86 0 4 827 294 300 0 0 chr15 31830571 31830651 -71664323 - L2a LINE L2 -5 3421 3342 4 827 254 143 20 0 chr15 31832663 31832712 -71662262 + CT-rich Low_complexity Low_complexity 2 51 0 4 827 465 269 0 18 chr15 31833647 31833757 -71661217 + MLT1D LTR MaLR 1 108 -397 4 827 671 323 19 19 chr15 31833817 31834022 -71660952 + B4A SINE B4 88 292 0 4 827 1089 281 40 45 chr15 31834098 31834475 -71660499 + MLT1D LTR MaLR 122 496 -9 4 827 238 228 171 37 chr15 31835787 31835816 -71659158 - L1MD1 LINE L1 -8 6234 6206 5 827 594 41 0 0 chr15 31835816 31835889 -71659085 + (TA)n Simple_repeat Simple_repeat 1 73 0 5 827 238 228 171 37 chr15 31835889 31835941 -71659033 - L1MD1 LINE L1 -37 6205 6142 5 827 242 261 14 14 chr15 31836216 31836286 -71658688 - ID2 SINE ID -11 72 3 5 827 4017 206 38 8 chr15 31836550 31837317 -71657657 - Lx5 LINE L1 0 7050 6261 5 827 204 271 0 0 chr15 31839589 31839637 -71655337 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 827 692 336 32 25 chr15 31839643 31839921 -71655053 - B4A SINE B4 -10 282 3 5 827 522 239 93 88 chr15 31840126 31840319 -71654655 + MLT1C LTR MaLR 1 194 -273 5 827 273 298 111 26 chr15 31840426 31840543 -71654431 + MLT1C LTR MaLR 334 460 -7 5 827 214 29 28 28 chr15 31840543 31840579 -71654395 + (TAA)n Simple_repeat Simple_repeat 3 38 0 5 827 297 180 56 65 chr15 31840896 31841003 -71653971 - Lx9 LINE L1 -6 7638 7533 5 827 226 295 26 0 chr15 31841004 31841082 -71653892 + Lx9 LINE L1 7333 7412 -232 5 827 259 270 25 75 chr15 31841331 31841411 -71653563 - L1MA4 LINE L1 -679 6794 6719 5 827 1397 271 117 31 chr15 31841522 31842165 -71652809 - L1MC1 LINE L1 -163 6170 5473 5 827 24 0 0 0 chr15 31842317 31842341 -71652633 + AT_rich Low_complexity Low_complexity 1 24 0 5 827 337 365 0 40 chr15 31842357 31842457 -71652517 - RSINE1 SINE B4 -1 164 69 5 827 1447 249 168 7 chr15 31842457 31843076 -71651898 - L1MC1 LINE L1 -2486 3660 2942 5 827 275 47 70 0 chr15 31843240 31843283 -71651691 + (CATAT)n Simple_repeat Simple_repeat 3 48 0 5 827 1246 247 117 18 chr15 31843318 31843805 -71651169 - L1MA4 LINE L1 -1576 5897 5390 5 827 2231 146 138 0 chr15 31843803 31844188 -71650786 - Lx4B LINE L1 -379 6679 6242 5 827 433 162 25 0 chr15 31844176 31844256 -71650718 + Lx4B LINE L1 6693 6774 -284 5 827 888 196 22 11 chr15 31844257 31844438 -71650536 + Lx4B LINE L1 6869 7051 -7 5 827 293 325 34 88 chr15 31844446 31844743 -71650231 - L1MA4 LINE L1 -502 5345 5065 5 827 768 145 0 0 chr15 31844772 31844903 -71650071 + (TTC)n Simple_repeat Simple_repeat 1 131 0 5 827 1479 282 105 31 chr15 31845056 31845995 -71648979 - L1M2 LINE L1 -788 5355 4347 5 827 638 252 51 19 chr15 31846001 31846159 -71648815 + Lx7 LINE L1 5550 5712 -168 5 827 1458 255 59 33 chr15 31846159 31846549 -71648425 - MTD LTR MaLR 0 419 20 5 827 854 292 32 7 chr15 31846549 31846875 -71648099 + Lx7 LINE L1 5711 6037 -1659 5 827 724 208 20 20 chr15 31846876 31847023 -71647951 + B1_Mur3 SINE Alu 1 147 -2 5 827 3440 48 5 2 chr15 31847037 31847436 -71647538 - MTB LTR MaLR 0 400 1 5 827 1432 281 88 45 chr15 31847515 31848093 -71646881 + Lx8 LINE L1 6053 6655 -818 5 827 1725 291 145 34 chr15 31848110 31848909 -71646065 - Lx8 LINE L1 -5 7468 6581 5 827 204 352 76 40 chr15 31849523 31849748 -71645226 + L2 LINE L2 2681 2913 -506 5 828 385 372 40 20 chr15 31850891 31851187 -71643787 + LTR82B Low_complexity ERVL 8 309 -521 5 828 308 332 138 20 chr15 31851365 31851568 -71643406 + LTR82B Low_complexity ERVL 558 784 -46 5 828 473 341 61 28 chr15 31853578 31853759 -71641215 - MLT2B3 LTR ERVL -24 530 344 5 828 786 129 65 0 chr15 31853763 31853902 -71641072 + URR1A DNA MER1_type 79 226 0 5 828 546 280 194 22 chr15 31853902 31854183 -71640791 - MLT2B3 LTR ERVL -194 326 9 5 828 301 403 20 10 chr15 31854452 31854650 -71640324 - LTR82A LTR ERVL -72 800 601 5 828 278 222 60 36 chr15 31854789 31854873 -71640101 - LTR82A LTR ERVL -490 382 297 5 828 210 279 14 14 chr15 31855070 31855139 -71639835 + (TATG)n Simple_repeat Simple_repeat 4 72 0 5 828 617 347 29 26 chr15 31855160 31855432 -71639542 - B4A SINE B4 -18 274 2 5 828 416 292 36 7 chr15 31855432 31855554 -71639420 - LTR82A LTR ERVL -746 126 1 5 828 1906 169 84 38 chr15 31855990 31856384 -71638590 + MTD LTR MaLR 1 412 -7 5 828 1098 220 98 55 chr15 31856385 31856712 -71638262 + MTD-int LTR MaLR 2 342 -916 5 828 509 272 119 27 chr15 31856711 31856930 -71638044 - MLT1B LTR MaLR -122 268 30 5 828 210 71 0 0 chr15 31857282 31857310 -71637664 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 828 805 280 63 46 chr15 31857323 31857607 -71637367 - B4A SINE B4 -2 290 2 5 828 2731 131 0 0 chr15 31857637 31858050 -71636924 - Lx2 LINE L1 -504 6493 6081 5 828 2090 123 24 27 chr15 31858050 31858383 -71636591 + Lx LINE L1 6322 6653 -1 5 828 4194 226 58 73 chr15 31858618 31860072 -71634902 - L1_Rod LINE L1 -301 5546 4114 5 828 448 281 100 51 chr15 31860265 31860529 -71634445 - L1M2 LINE L1 -4770 2079 1805 5 828 1216 88 0 0 chr15 31860529 31860676 -71634298 - B1_Mus2 SINE Alu 0 147 1 5 828 448 281 100 51 chr15 31860676 31861019 -71633955 - L1M2 LINE L1 -5045 1804 1443 5 828 480 143 0 0 chr15 31861055 31861139 -71633835 + (TG)n Simple_repeat Simple_repeat 2 85 0 5 828 7760 64 6 3 chr15 31861228 31862201 -71632773 - L1Md_F2 LINE L1 -11 6571 5596 5 828 2782 39 0 0 chr15 31862205 31862542 -71632432 - IAPLTR4 LTR ERVK -8 337 1 5 828 6356 250 53 40 chr15 31862542 31864933 -71630041 - IAPLTR3-int LTR ERVK -351 7329 5176 5 828 834 89 35 50 chr15 31865206 31865347 -71629627 - IAPLTR3-int LTR ERVK -2911 4670 4532 5 828 453 190 64 2 chr15 31865361 31865477 -71629497 - IAPLTR3-int LTR ERVK -2380 2464 2357 5 828 3278 137 200 0 chr15 31865482 31866068 -71628906 - ETnERV2-int LTR ERVK -3135 4271 3569 5 828 667 232 374 25 chr15 31866094 31866316 -71628658 - ETnERV2-int LTR ERVK -4653 2753 2454 5 828 439 186 93 0 chr15 31866327 31866445 -71628529 - ETnERV2-int LTR ERVK -5557 1849 1721 5 828 1401 209 116 43 chr15 31866429 31866923 -71628051 - ETnERV2-int LTR ERVK -4755 651 251 5 828 468 144 19 116 chr15 31867035 31867266 -71627708 - IAPLTR3-int LTR ERVK -5866 955 831 5 828 516 209 17 42 chr15 31867266 31867386 -71627588 - IAPLTR3-int LTR ERVK -6704 117 1 5 828 2690 65 0 0 chr15 31867392 31867729 -71627245 - IAPLTR4 LTR ERVK -8 337 1 5 828 10649 74 7 16 chr15 31867729 31869167 -71625807 - L1_Mm LINE L1 -280 5603 4179 5 828 4272 71 0 7 chr15 31869165 31869743 -71625231 - L1_Mm LINE L1 -3418 2465 1892 5 828 1380 136 0 43 chr15 31869754 31869985 -71624989 - L1VL1 LINE L1 -6174 248 28 5 828 38872 44 1 3 chr15 31870350 31876821 -71618153 - L1Md_T LINE L1 -3 6582 30 5 828 505 301 171 27 chr15 31877370 31877704 -71617270 - MLT1A1 LTR MaLR -22 386 5 5 828 486 350 11 18 chr15 31877809 31877999 -71616975 + B4A SINE B4 86 280 -12 5 828 290 235 15 0 chr15 31879221 31879289 -71615685 + MTE2a LTR MaLR 81 149 -270 5 828 354 269 38 9 chr15 31879314 31879419 -71615555 + MTE2a LTR MaLR 265 372 -7 5 828 417 165 129 73 chr15 31879920 31879988 -71614986 - Lx8 LINE L1 -35 7438 7393 5 828 4873 64 19 2 chr15 31879988 31880565 -71614409 + LTRIS_Mus LTR ERV1 1 587 0 5 828 417 361 83 30 chr15 31880565 31880624 -71614350 - Lx8 LINE L1 -81 7392 7326 5 828 240 100 0 0 chr15 31880624 31880664 -71614310 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 828 2383 225 63 4 chr15 31880664 31881200 -71613774 - Lx9 LINE L1 -190 7454 6887 5 828 330 339 93 62 chr15 31882969 31883293 -71611681 + L1ME3A LINE L1 5731 6064 -109 5 828 3401 47 26 0 chr15 31883422 31883808 -71611166 + MTA_Mm LTR MaLR 1 396 0 5 828 9224 57 6 3 chr15 31883808 31884902 -71610072 + MTA_Mm-int LTR MaLR 1 1098 0 5 828 3433 56 2 8 chr15 31884902 31885300 -71609674 + MTA_Mm LTR MaLR 1 396 0 5 828 261 281 8 55 chr15 31885393 31885521 -71609453 + Lx8 LINE L1 7352 7473 0 5 828 241 288 37 24 chr15 31886462 31886544 -71608430 + MIR SINE MIR 176 258 -4 5 828 298 280 194 19 chr15 31886991 31887151 -71607823 + MLT1H LTR MaLR 362 549 0 5 828 278 324 188 0 chr15 31887502 31887672 -71607302 + MER20 DNA MER1_type 2 203 -16 5 828 3619 88 31 0 chr15 31887844 31888321 -71606653 + L1_Mus3 LINE L1 6147 6638 0 5 828 1042 316 61 0 chr15 31888892 31889287 -71605687 + RCHARR1 DNA MER1_type 34 452 -522 5 828 234 91 0 0 chr15 31889351 31889384 -71605590 + (TCC)n Simple_repeat Simple_repeat 2 34 0 5 828 1587 254 25 2 chr15 31889642 31890091 -71604883 + RCHARR1 DNA MER1_type 516 974 0 5 828 1934 94 74 0 chr15 31890545 31890842 -71604132 + ORR1A2 LTR MaLR 1 319 -8 5 828 4495 141 3 0 chr15 31892384 31893079 -71601895 - L1_Mm LINE L1 -40 5843 5147 5 828 1426 67 41 86 chr15 31893081 31893326 -71601648 + L1_Mus4 LINE L1 6403 6636 0 5 828 2132 189 35 40 chr15 31896910 31897334 -71597640 - Lx5 LINE L1 -143 6907 6486 5 828 810 151 86 5 chr15 31897325 31897511 -71597463 + Lx5 LINE L1 6850 7050 0 5 828 22 80 0 0 chr15 31897560 31897610 -71597364 + AT_rich Low_complexity Low_complexity 1 50 0 5 828 676 191 8 8 chr15 31897624 31897751 -71597223 + ORR1D2 LTR MaLR 198 324 -46 5 828 250 268 0 96 chr15 31897765 31897901 -71597073 - Lx9 LINE L1 -23 7621 7499 5 828 201 175 0 0 chr15 31897904 31897944 -71597030 + (TATG)n Simple_repeat Simple_repeat 3 42 0 5 828 361 149 18 18 chr15 31898553 31898662 -71596312 + (CAGAGA)n Simple_repeat Simple_repeat 4 112 0 5 828 209 317 57 19 chr15 31898842 31898948 -71596026 + MIRb SINE MIR 80 189 -79 5 828 659 324 150 45 chr15 31901846 31902353 -71592621 - MER68 LTR ERVL -1 562 3 5 828 282 266 90 41 chr15 31902886 31903031 -71591943 + L1MEg LINE L1 511 662 -5422 5 828 375 321 83 85 chr15 31903342 31903859 -71591115 + L1MEg LINE L1 1027 1542 -4542 5 828 450 323 0 0 chr15 31905692 31905816 -71589158 - B1F SINE Alu -21 128 5 5 828 497 304 48 95 chr15 31905874 31906063 -71588911 - B3A SINE B2 -16 182 3 5 828 478 267 84 58 chr15 31907701 31907929 -71587045 - B4A SINE B4 -56 236 1 5 828 3604 65 0 0 chr15 31908437 31908880 -71586094 - L1_Mus1 LINE L1 0 6567 6125 5 828 21 0 0 0 chr15 31910131 31910152 -71584822 + AT_rich Low_complexity Low_complexity 1 21 0 5 828 861 299 43 71 chr15 31910452 31910891 -71584083 + L1M3e LINE L1 175 601 -6429 5 828 3686 136 34 18 chr15 31911944 31912557 -71582417 + Lx2 LINE L1 6357 6979 -18 5 828 1504 268 86 18 chr15 31912561 31913016 -71581958 - MTEa-int LTR MaLR -96 1484 999 5 828 2961 85 17 5 chr15 31913041 31913443 -71581531 + MTB_Mm LTR MaLR 1 407 0 5 828 494 284 21 7 chr15 31913487 31913629 -71581345 - MTEa-int LTR MaLR -1435 145 2 5 828 339 248 100 69 chr15 31913630 31913760 -71581214 - MTEa LTR MaLR 0 379 246 5 828 378 283 33 16 chr15 31913811 31913933 -71581041 - MTEa LTR MaLR -252 127 4 5 828 23 0 0 0 chr15 31914805 31914828 -71580146 + AT_rich Low_complexity Low_complexity 1 23 0 5 828 302 297 100 56 chr15 31915672 31915922 -71579052 + MLT1B LTR MaLR 3 263 -127 5 828 530 303 64 36 chr15 31916023 31916242 -71578732 + MTD LTR MaLR 13 237 -182 5 828 270 259 12 0 chr15 31916255 31916332 -71578642 + GA-rich Low_complexity Low_complexity 1 78 0 5 828 922 113 13 0 chr15 31916332 31916483 -71578491 + (GGA)n Simple_repeat Simple_repeat 2 154 0 5 828 759 167 22 0 chr15 31916504 31916642 -71578332 + MTD LTR MaLR 279 419 0 5 828 185 61 91 0 chr15 31918542 31918575 -71576399 + T-rich Low_complexity Low_complexity 4 39 0 5 828 1328 233 99 0 chr15 31919763 31920106 -71574868 - MTEb LTR MaLR -2 377 1 5 828 286 55 73 0 chr15 31920175 31920230 -71574744 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 5 828 403 310 0 41 chr15 31920257 31920378 -71574596 - Lx6 LINE L1 -56 7404 7289 5 828 216 67 0 0 chr15 31920480 31920510 -71574464 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 828 1920 154 60 3 chr15 31921167 31921519 -71573455 - ORR1B1 LTR MaLR -4 390 19 5 828 391 220 77 88 chr15 31922121 31922208 -71572766 - L1MA9 LINE L1 -51 6261 6169 5 828 1070 122 0 0 chr15 31922208 31922355 -71572619 - B1_Mus1 SINE Alu 0 148 2 5 828 391 220 77 88 chr15 31922355 31922461 -71572513 - L1MA9 LINE L1 -144 6168 6070 5 828 340 200 10 10 chr15 31922696 31922797 -71572177 + GA-rich Low_complexity Low_complexity 2 102 0 6 828 183 42 0 0 chr15 31922795 31922819 -71572155 + (TGAA)n Simple_repeat Simple_repeat 2 25 0 6 828 475 285 23 35 chr15 31923011 31923182 -71571792 - MER5A DNA MER1_type -4 185 17 6 828 650 320 6 0 chr15 31923908 31924086 -71570888 + (TGGG)n Simple_repeat Simple_repeat 2 180 0 6 828 689 340 0 0 chr15 31924106 31924374 -71570600 + (TGGG)n Simple_repeat Simple_repeat 1 268 0 6 828 760 223 29 108 chr15 31924574 31924815 -71570159 + ORR1D2 LTR MaLR 147 368 -2 6 828 1722 240 41 0 chr15 31925082 31925473 -71569501 + MTD LTR MaLR 13 419 0 6 828 1461 149 209 15 chr15 31925543 31925816 -71569158 + ORR1A3 LTR MaLR 1 326 0 6 828 234 0 0 0 chr15 31926326 31926352 -71568622 + (T)n Simple_repeat Simple_repeat 1 26 0 6 828 227 31 0 30 chr15 31927343 31927376 -71567598 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6 828 2042 206 26 158 chr15 31927544 31928246 -71566728 + RMER19C LTR ERVK 1 609 -2 6 828 372 43 0 0 chr15 31930053 31930099 -71564875 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 828 367 286 17 68 chr15 31930119 31930295 -71564679 - B4A SINE B4 -18 274 108 6 828 1572 176 112 37 chr15 31930892 31931240 -71563734 + ORR1D1 LTR MaLR 1 374 0 6 828 287 286 4 127 chr15 31931250 31931478 -71563496 - L2a LINE L2 0 3426 3227 6 828 550 296 49 14 chr15 31931708 31931931 -71563043 - ERVL-E-int LTR ERVL -4079 1588 1358 6 828 513 88 0 0 chr15 31932399 31932479 -71562495 + (TC)n Simple_repeat Simple_repeat 2 81 0 6 828 198 0 0 0 chr15 31932479 31932501 -71562473 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 828 183 42 0 0 chr15 31933278 31933302 -71561672 + (C)n Simple_repeat Simple_repeat 1 24 0 6 828 252 137 0 0 chr15 31934992 31935043 -71559931 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 828 840 261 145 8 chr15 31935092 31935347 -71559627 - B4 SINE B4 -1 291 2 6 828 230 154 26 0 chr15 31936700 31936739 -71558235 - L1M5 LINE L1 -519 5605 5566 6 828 483 175 40 40 chr15 31937239 31937477 -71557497 + (TCTA)n Simple_repeat Simple_repeat 1 238 0 6 828 208 188 0 20 chr15 31938525 31938574 -71556400 + A-rich Low_complexity Low_complexity 1 48 0 6 828 239 296 14 27 chr15 31938828 31938901 -71556073 + ID4_ SINE ID 2 73 -10 6 828 549 0 0 0 chr15 31938905 31938966 -71556008 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 6 828 543 31 0 0 chr15 31940159 31940224 -71554750 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 828 327 160 0 0 chr15 31941151 31941226 -71553748 + CT-rich Low_complexity Low_complexity 2 76 0 6 828 555 16 0 0 chr15 31941232 31941296 -71553678 + (TG)n Simple_repeat Simple_repeat 2 65 0 6 828 282 56 0 0 chr15 31943199 31943235 -71551739 + (GA)n Simple_repeat Simple_repeat 1 36 0 6 828 225 0 0 0 chr15 31943266 31943291 -71551683 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 828 669 279 20 86 chr15 31943303 31943496 -71551478 - B4 SINE B4 -53 239 53 6 828 222 37 0 0 chr15 31943496 31943523 -71551451 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 6 828 1521 51 0 0 chr15 31943526 31943704 -71551270 - B2_Mm1t SINE B2 -14 179 2 6 828 669 279 20 86 chr15 31943704 31943761 -71551213 - B4 SINE B4 -240 52 2 6 828 23 0 0 0 chr15 31947544 31947567 -71547407 + AT_rich Low_complexity Low_complexity 1 23 0 6 828 3086 291 43 18 chr15 31947567 31947690 -71547284 - Lx8 LINE L1 0 7473 7349 6 828 348 24 0 0 chr15 31947690 31947731 -71547243 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 828 3086 291 43 18 chr15 31947731 31948602 -71546372 - Lx8 LINE L1 -125 7348 6454 6 828 2867 38 3 11 chr15 31948620 31948995 -71545979 - IAPEY_LTR LTR ERVK 0 385 14 6 828 25 0 0 0 chr15 31950051 31950076 -71544898 + AT_rich Low_complexity Low_complexity 1 25 0 6 828 319 342 0 24 chr15 31950466 31950589 -71544385 + G-rich Low_complexity Low_complexity 5 124 0 6 828 501 84 0 0 chr15 31951720 31951791 -71543183 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 6 828 585 0 0 0 chr15 31951807 31951872 -71543102 + (GAGAA)n Simple_repeat Simple_repeat 5 69 0 6 828 34 42 0 0 chr15 31952036 31952084 -71542890 + AT_rich Low_complexity Low_complexity 1 48 0 6 828 535 321 70 39 chr15 31952857 31953116 -71541858 + B4A SINE B4 2 268 -24 6 828 319 274 75 59 chr15 31953176 31953362 -71541612 - MLT1B LTR MaLR -34 356 168 6 828 683 276 69 36 chr15 31953371 31953646 -71541328 - MLT1A0 LTR MaLR -67 298 15 6 828 352 242 25 8 chr15 31953813 31953934 -71541040 + Lx9 LINE L1 7520 7642 -2 6 828 393 22 0 0 chr15 31953965 31954011 -71540963 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 6 828 2827 85 47 2 chr15 31954202 31954605 -71540369 - BGLII LTR ERVK 0 421 1 6 828 4472 174 42 5 chr15 31955037 31955866 -71539108 - RMER13B LTR ERVK -48 860 1 6 828 400 333 61 10 chr15 31956813 31957010 -71537964 - MER20 DNA MER1_type -8 211 5 6 828 387 0 0 0 chr15 31957675 31957718 -71537256 + (TA)n Simple_repeat Simple_repeat 2 44 0 6 828 741 124 0 0 chr15 31959209 31959338 -71535636 + (TG)n Simple_repeat Simple_repeat 2 130 0 6 828 649 261 7 0 chr15 31959339 31959492 -71535482 - B3A SINE B2 -44 154 1 6 828 27 29 0 0 chr15 31962243 31962277 -71532697 + AT_rich Low_complexity Low_complexity 1 34 0 6 828 773 240 22 22 chr15 31962286 31962469 -71532505 - B3A SINE B2 -15 183 1 6 828 992 261 168 36 chr15 31962640 31962974 -71532000 + MTE2b LTR MaLR 2 379 0 6 828 303 191 0 42 chr15 31964058 31964129 -71530845 - L1MEg LINE L1 -4135 1949 1882 6 828 423 0 0 0 chr15 31964129 31964176 -71530798 + (T)n Simple_repeat Simple_repeat 1 47 0 6 828 246 62 0 0 chr15 31965790 31965822 -71529152 + (TGG)n Simple_repeat Simple_repeat 2 33 0 6 828 2117 127 5 81 chr15 31966680 31966762 -71528212 + MTC LTR MaLR 1 82 -339 6 828 1048 77 13 6 chr15 31966762 31966918 -71528056 + L1_Mus3 LINE L1 6473 6629 -9 6 828 2117 127 5 81 chr15 31966918 31967254 -71527720 + MTC LTR MaLR 83 387 -34 6 828 213 77 18 55 chr15 31967255 31967310 -71527664 + (TTTTTG)n Simple_repeat Simple_repeat 3 55 0 6 828 247 180 0 39 chr15 31967341 31967393 -71527581 + MTC-int LTR MaLR 1 50 -1742 6 828 4765 167 74 27 chr15 31967389 31968417 -71526557 + MTC-int LTR MaLR 183 1258 0 6 828 1793 131 68 126 chr15 31968417 31968855 -71526119 + MTC LTR MaLR 1 413 -8 6 828 423 297 131 30 chr15 31969743 31970160 -71524814 + MLT1C LTR MaLR 1 459 -8 6 828 436 268 0 18 chr15 31970784 31970898 -71524076 + Lx8 LINE L1 7010 7121 -352 6 828 394 337 57 0 chr15 31971122 31971297 -71523677 - MIR SINE MIR -55 207 23 6 828 200 200 25 0 chr15 31972720 31972760 -71522214 + G-rich Low_complexity Low_complexity 2 42 0 6 828 197 350 80 0 chr15 31973056 31973156 -71521818 - L2 LINE L2 -558 2861 2754 6 828 3090 36 41 8 chr15 31973245 31973632 -71521342 - MTB LTR MaLR 0 400 1 6 828 225 0 0 0 chr15 31974626 31974651 -71520323 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 6 828 283 176 0 0 chr15 31975697 31975748 -71519226 - ORR1D2 LTR MaLR 0 370 320 6 828 347 232 0 0 chr15 31975752 31975821 -71519153 - ORR1D2-int LTR MaLR -1301 69 1 6 828 899 261 111 41 chr15 31975821 31976165 -71518809 - ORR1D2 LTR MaLR 0 370 3 6 828 584 304 71 44 chr15 31976175 31976585 -71518389 - L1MA4 LINE L1 -73 6227 5807 6 828 24 0 0 0 chr15 31976680 31976704 -71518270 + AT_rich Low_complexity Low_complexity 1 24 0 6 828 23 54 0 0 chr15 31976837 31976874 -71518100 + AT_rich Low_complexity Low_complexity 1 37 0 6 828 390 42 0 0 chr15 31976977 31977025 -71517949 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 828 1265 172 9 0 chr15 31977496 31977717 -71517257 + URR1A DNA MER1_type 3 225 -1 6 828 335 309 83 67 chr15 31980821 31981566 -71513408 - L1MC LINE L1 -1979 4167 3411 6 103 2588 287 132 26 chr15 31981555 31982711 -71512263 - Lx9 LINE L1 0 7644 6367 6 829 417 263 96 9 chr15 31982769 31982884 -71512090 - B1_Mur1 SINE Alu -15 134 10 6 829 265 260 96 0 chr15 31983141 31983245 -71511729 - L1MC LINE L1 -2745 3401 3288 6 829 457 323 0 42 chr15 31983281 31983446 -71511528 - B3A SINE B2 -7 191 34 6 829 209 158 35 0 chr15 31983502 31983559 -71511415 + T-rich Low_complexity Low_complexity 2 60 0 6 829 614 211 6 17 chr15 31983767 31983945 -71511029 + GA-rich Low_complexity Low_complexity 3 178 0 6 829 197 33 33 0 chr15 31983945 31983975 -71510999 + (TAGG)n Simple_repeat Simple_repeat 1 31 0 6 829 3425 56 0 5 chr15 31984141 31984573 -71510401 + L1Md_F3 LINE L1 6143 6572 -12 6 829 243 200 59 44 chr15 31985539 31985607 -71509367 - Lx8 LINE L1 -1567 5906 5838 6 829 258 277 39 29 chr15 31986961 31987065 -71507909 + MER31-int LTR ERV1 3178 3282 -1654 6 829 21 0 0 0 chr15 31987219 31987240 -71507734 + AT_rich Low_complexity Low_complexity 1 21 0 6 829 353 275 83 0 chr15 31987378 31987487 -71507487 - B3A SINE B2 -16 182 65 6 829 266 268 85 51 chr15 31988165 31988283 -71506691 + LTR37A LTR ERV1 84 205 -221 6 829 344 212 12 70 chr15 31988561 31988647 -71506327 + ID4_ SINE ID 1 81 -2 6 829 344 225 8 91 chr15 31991277 31991409 -71503565 + GA-rich Low_complexity Low_complexity 4 124 0 6 829 2180 117 8 38 chr15 31992703 31993068 -71501906 + Lx2 LINE L1 6634 6987 -10 6 829 1547 231 78 3 chr15 31994113 31994400 -71500574 - MTD LTR MaLR 0 419 105 6 829 3154 57 5 12 chr15 31994400 31994808 -71500166 + L1Md_F2 LINE L1 6178 6582 0 6 829 1547 231 78 3 chr15 31994808 31994894 -71500080 - MTD LTR MaLR -315 104 19 6 829 239 200 0 0 chr15 31995689 31995739 -71499235 - L2a LINE L2 -68 3358 3309 6 829 27 49 0 0 chr15 31996121 31996162 -71498812 + AT_rich Low_complexity Low_complexity 1 41 0 6 829 356 274 6 24 chr15 31998384 31998517 -71496457 + L1MA5 LINE L1 5826 5955 -1689 6 829 200 191 43 0 chr15 31999953 32000000 -71494974 + (TA)n Simple_repeat Simple_repeat 1 49 0 6 829 767 265 20 10 chr15 32000030 32000228 -71494746 - Lx8 LINE L1 -143 7330 7131 1 829 349 259 68 17 chr15 32000424 32000542 -71494432 - MER104 DNA Tc2 -4 177 54 2 829 200 389 9 0 chr15 32002830 32002943 -71492031 - MIR SINE MIR -64 198 85 3 829 2364 154 10 42 chr15 32003215 32003622 -71491352 - ORR1B1 LTR MaLR 0 394 1 4 829 1089 288 25 34 chr15 32003629 32003985 -71490989 - MTE2b LTR MaLR -5 374 22 5 829 572 187 0 9 chr15 32004130 32004243 -71490731 - ORR1C2 LTR MaLR -1 383 272 6 829 465 34 0 0 chr15 32004243 32004302 -71490672 + (TAG)n Simple_repeat Simple_repeat 1 59 0 7 829 529 192 0 0 chr15 32004311 32004415 -71490559 - ORR1C2 LTR MaLR -269 105 2 6 829 539 348 45 37 chr15 32004421 32004921 -71490053 - L1MA4 LINE L1 -410 5890 5420 8 829 3133 66 2 5 chr15 32005146 32005543 -71489431 + MTA_Mm LTR MaLR 1 396 0 9 829 311 280 25 25 chr15 32005953 32006074 -71488900 - LTR16C LTR ERVL -135 354 234 1 829 921 159 0 0 chr15 32006783 32006946 -71488028 + (TA)n Simple_repeat Simple_repeat 1 163 0 1 829 556 262 201 0 chr15 32006964 32007178 -71487796 + Lx8 LINE L1 6967 7223 -250 1 829 445 139 16 24 chr15 32007792 32007917 -71487057 + (TG)n Simple_repeat Simple_repeat 2 125 0 1 829 668 259 67 14 chr15 32009179 32009387 -71485587 + MTE2b LTR MaLR 159 377 -2 1 829 566 314 90 42 chr15 32009425 32009770 -71485204 + MLT2C1 LTR ERVL 12 404 -10 1 829 331 273 0 0 chr15 32009857 32009945 -71485029 + (TCCA)n Simple_repeat Simple_repeat 1 88 0 1 829 1038 130 0 0 chr15 32009992 32010169 -71484805 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 1 829 573 218 0 76 chr15 32011340 32011484 -71483490 - Lx9 LINE L1 -527 7117 6985 1 829 497 200 41 24 chr15 32011514 32011637 -71483337 + Lx9 LINE L1 7345 7469 -175 1 829 261 0 0 0 chr15 32011640 32011669 -71483305 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 829 485 202 18 0 chr15 32011687 32011796 -71483178 + Lx9 LINE L1 7534 7644 0 1 829 826 257 144 9 chr15 32013522 32013848 -71481126 - ORR1D2 LTR MaLR 0 370 1 2 829 786 50 0 0 chr15 32014539 32014638 -71480336 + (TG)n Simple_repeat Simple_repeat 1 99 0 2 829 232 342 57 31 chr15 32016107 32016336 -71478638 + MLT1H LTR MaLR 44 278 -271 2 829 215 286 45 112 chr15 32016277 32016411 -71478563 - B1F2 SINE Alu -24 125 1 2 829 255 217 50 0 chr15 32016352 32016412 -71478562 - ID_B1 SINE B4 -81 143 81 2 829 522 259 20 20 chr15 32017057 32017203 -71477771 - RSINE1 SINE B4 -14 151 6 2 829 383 174 163 0 chr15 32018803 32018901 -71476073 - B1_Mur1 SINE Alu -19 130 17 2 829 504 308 23 12 chr15 32019077 32019248 -71475726 + MER2 DNA MER2_type 127 299 -46 2 829 596 272 245 51 chr15 32020266 32020351 -71474623 - MTE2b LTR MaLR -2 377 288 2 829 1997 138 22 6 chr15 32020351 32020673 -71474301 + ORR1A2 LTR MaLR 1 327 0 2 829 596 272 245 51 chr15 32020673 32020837 -71474137 - MTE2b LTR MaLR -92 287 97 2 829 713 58 0 10 chr15 32020837 32020941 -71474033 + (CA)n Simple_repeat Simple_repeat 2 104 0 3 829 596 272 245 51 chr15 32020941 32021004 -71473970 - MTE2b LTR MaLR -283 96 5 2 829 322 182 284 0 chr15 32022518 32022606 -71472368 - B3A SINE B2 -49 149 37 3 829 261 0 0 0 chr15 32023629 32023658 -71471316 + (T)n Simple_repeat Simple_repeat 1 29 0 3 829 503 31 0 15 chr15 32024656 32024722 -71470252 + (GGGA)n Simple_repeat Simple_repeat 1 65 0 3 829 661 53 21 0 chr15 32024791 32024885 -71470089 + (TCTA)n Simple_repeat Simple_repeat 2 97 0 3 829 210 37 0 0 chr15 32024896 32024923 -71470051 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 829 660 115 27 0 chr15 32025100 32025248 -71469726 + (TCTA)n Simple_repeat Simple_repeat 2 153 0 3 829 414 0 0 0 chr15 32025251 32025297 -71469677 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 829 527 218 58 36 chr15 32025310 32025448 -71469526 - B3A SINE B2 -57 141 1 3 829 438 278 43 63 chr15 32025485 32025692 -71469282 - RLTR42-int LTR ERVK -4126 1396 1194 3 829 879 252 61 18 chr15 32026569 32026848 -71468126 - Lx9 LINE L1 -141 7503 7213 4 829 874 271 64 40 chr15 32027352 32027679 -71467295 - Lx9 LINE L1 -516 7128 6794 4 829 510 281 25 50 chr15 32028794 32028955 -71466019 + B4 SINE B4 136 292 0 4 829 477 250 70 61 chr15 32029347 32029360 -71465614 - B3 SINE B2 0 216 204 4 829 3757 66 17 4 chr15 32029360 32029834 -71465140 - L1_Mus1 LINE L1 0 6567 6088 4 829 559 250 70 61 chr15 32029834 32029884 -71465090 - B3A SINE B2 -13 203 146 4 829 3982 112 9 24 chr15 32029884 32030460 -71464514 + RMER2 LTR ERV1 1 567 0 4 829 559 273 6 38 chr15 32030460 32030608 -71464366 - B3A SINE B2 -51 147 2 4 829 361 281 19 120 chr15 32030917 32031075 -71463899 + RSINE1 SINE B4 3 144 -21 4 829 1526 154 0 21 chr15 32032594 32032873 -71462101 - RMER6C LTR ERVK 0 690 418 4 829 1218 157 8 42 chr15 32032925 32033165 -71461809 - RMER6C LTR ERVK -488 232 1 4 829 204 238 0 0 chr15 32034966 32035029 -71459945 + CT-rich Low_complexity Low_complexity 3 65 0 4 829 2300 92 32 0 chr15 32035452 32035766 -71459208 + ORR1A2 LTR MaLR 1 324 -3 4 829 253 308 33 16 chr15 32035877 32035999 -71458975 - L1MA4A LINE L1 -368 5935 5812 4 829 731 312 91 13 chr15 32036170 32036488 -71458486 + MLT1B LTR MaLR 40 382 -8 5 829 1716 191 30 14 chr15 32036560 32036926 -71458048 + ORR1D1 LTR MaLR 3 374 0 5 829 22 0 0 0 chr15 32037105 32037127 -71457847 + AT_rich Low_complexity Low_complexity 1 22 0 5 829 821 238 93 0 chr15 32038460 32038653 -71456321 - B3 SINE B2 -4 212 2 5 829 695 76 25 16 chr15 32038996 32039117 -71455857 + (TCTA)n Simple_repeat Simple_repeat 3 124 0 5 829 205 261 0 0 chr15 32040005 32040051 -71454923 + CT-rich Low_complexity Low_complexity 2 47 0 5 829 213 39 0 0 chr15 32040093 32040119 -71454855 + (TCCC)n Simple_repeat Simple_repeat 4 29 0 5 829 978 110 0 0 chr15 32040122 32040268 -71454706 + (TTTC)n Simple_repeat Simple_repeat 1 146 0 5 829 335 347 40 0 chr15 32040269 32040393 -71454581 - ID_B1 SINE B4 -14 210 82 5 829 25 31 0 0 chr15 32040420 32040452 -71454522 + AT_rich Low_complexity Low_complexity 1 32 0 5 829 210 71 0 0 chr15 32040863 32040891 -71454083 + (TTTC)n Simple_repeat Simple_repeat 3 30 0 6 829 2202 34 4 19 chr15 32041294 32041562 -71453412 + L1Md_F2 LINE L1 6304 6567 -15 6 829 22 35 0 0 chr15 32041562 32041591 -71453383 + AT_rich Low_complexity Low_complexity 1 29 0 6 829 461 305 24 12 chr15 32043073 32043242 -71451732 - Lx9 LINE L1 -560 6913 6743 6 829 1197 196 117 51 chr15 32043349 32043591 -71451383 - ORR1D1 LTR MaLR -17 357 107 6 829 2800 78 0 49 chr15 32043591 32043982 -71450992 - L1_Mus2 LINE L1 0 6566 6195 6 829 1197 196 117 51 chr15 32043982 32044072 -71450902 - ORR1D1 LTR MaLR -268 106 5 6 829 240 111 0 0 chr15 32044576 32044612 -71450362 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 6 829 1091 237 36 40 chr15 32044913 32045216 -71449758 - Lx6 LINE L1 -12 7448 7147 6 829 21 71 0 0 chr15 32045228 32045270 -71449704 + AT_rich Low_complexity Low_complexity 1 42 0 6 829 1406 264 78 33 chr15 32045342 32046260 -71448714 - Lx9 LINE L1 -1015 6629 5504 6 829 857 234 39 85 chr15 32046441 32046862 -71448112 - RMER16 LTR ERVK 0 533 1 6 829 934 276 160 19 chr15 32048131 32048493 -71446481 + RMER1C Other Other 496 908 -434 7 829 339 284 0 11 chr15 32048510 32048599 -71446375 + RMER1C Other Other 680 767 -575 7 829 431 268 138 99 chr15 32048604 32048836 -71446138 + MER2 DNA MER2_type 105 345 0 7 829 184 346 0 0 chr15 32048898 32048950 -71446024 - L4 LINE RTE -701 1328 1277 7 829 4155 146 28 33 chr15 32049360 32050120 -71444854 - RMER6A LTR ERVK 0 756 1 7 829 276 232 197 89 chr15 32050984 32051197 -71443777 + Charlie2a DNA MER1_type 1464 1699 -1162 7 829 537 239 165 21 chr15 32051357 32051390 -71443584 - B3 SINE B2 0 216 168 7 829 507 45 0 0 chr15 32051390 32051456 -71443518 + (TG)n Simple_repeat Simple_repeat 1 66 0 7 829 537 239 165 21 chr15 32051456 32051610 -71443364 - B3 SINE B2 -49 167 2 7 829 563 353 18 67 chr15 32051610 32051999 -71442975 + Lx8 LINE L1 7071 7440 -33 7 829 252 335 125 47 chr15 32052217 32052577 -71442397 + Charlie2a DNA MER1_type 1870 2257 -604 7 829 2028 231 62 75 chr15 32052577 32053111 -71441863 + Lx5 LINE L1 6524 7050 0 7 829 941 160 11 32 chr15 32053223 32053410 -71441564 + Lx4B LINE L1 6876 7058 0 8 829 225 347 11 0 chr15 32053631 32053726 -71441248 - MER5A DNA MER1_type -74 115 20 8 829 15746 84 85 7 chr15 32053793 32054604 -71440370 + L1VL4 LINE L1 216 1103 -2456 8 829 2050 129 6 6 chr15 32054604 32054915 -71440059 - RLTR10E LTR ERVK 0 311 1 8 829 15746 70 15 20 chr15 32054915 32056916 -71438058 + L1VL4 LINE L1 1104 3097 -462 8 829 465 34 0 0 chr15 32057075 32057134 -71437840 + (TG)n Simple_repeat Simple_repeat 1 59 0 8 829 909 96 0 0 chr15 32057134 32057289 -71437685 + (GA)n Simple_repeat Simple_repeat 1 156 0 8 829 261 141 64 0 chr15 32057294 32057372 -71437602 + (CAGAGA)n Simple_repeat Simple_repeat 6 88 0 8 829 315 71 0 0 chr15 32057803 32057845 -71437129 + (TA)n Simple_repeat Simple_repeat 1 42 0 8 829 1049 128 99 0 chr15 32058398 32058570 -71436404 + B2_Mm2 SINE B2 1 189 -6 8 829 1214 302 59 5 chr15 32058688 32059094 -71435880 - Lx7 LINE L1 -369 7327 6900 8 829 283 346 67 0 chr15 32061491 32061595 -71433379 + PB1D10 SINE Alu 1 111 -6 9 829 365 337 48 6 chr15 32062180 32062347 -71432627 + LTR79 LTR ERVL 327 500 -27 9 829 249 196 0 0 chr15 32062471 32062522 -71432452 + A-rich Low_complexity Low_complexity 1 51 0 9 829 217 303 68 34 chr15 32062827 32062974 -71432000 - L2b LINE L2 -213 3162 3011 9 829 542 336 19 8 chr15 32063177 32063441 -71431533 - L1MC3 LINE L1 -15 7770 7504 9 829 235 271 12 12 chr15 32063506 32063592 -71431382 - L1MC3 LINE L1 -439 7346 7261 9 829 414 0 0 0 chr15 32063772 32063818 -71431156 + (TG)n Simple_repeat Simple_repeat 2 47 0 9 829 703 321 199 20 chr15 32063921 32064795 -71430179 - L1MC3 LINE L1 -1535 6250 5221 9 829 207 0 0 0 chr15 32064810 32064833 -71430141 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 9 829 901 133 7 20 chr15 32065632 32065778 -71429196 - B1_Mur4 SINE Alu -1 149 6 9 829 343 223 21 142 chr15 32065657 32065798 -71429176 - MT2B LTR ERVL -323 278 155 9 829 991 286 62 0 chr15 32065840 32066099 -71428875 + B4A SINE B4 2 276 -16 9 829 246 62 0 0 chr15 32066263 32066295 -71428679 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 829 463 306 114 59 chr15 32067726 32068147 -71426827 + MLT1D LTR MaLR 48 491 -14 1 829 321 284 24 12 chr15 32068313 32068395 -71426579 + ID4 SINE ID 1 83 0 1 829 30 0 0 0 chr15 32068888 32068918 -71426056 + AT_rich Low_complexity Low_complexity 1 30 0 1 829 478 314 16 8 chr15 32069021 32069143 -71425831 + RSINE1 SINE B4 12 134 -31 1 829 587 274 13 27 chr15 32069158 32069308 -71425666 - MLT1C LTR MaLR -30 437 290 1 829 1275 48 7 0 chr15 32069690 32069836 -71425138 + B1_Mm SINE Alu 1 147 0 1 829 978 128 6 22 chr15 32069838 32070021 -71424953 + GA-rich Low_complexity Low_complexity 1 180 0 1 829 1192 68 0 26 chr15 32070178 32070329 -71424645 - B1_Mus2 SINE Alu 0 147 1 1 829 25 75 0 0 chr15 32070491 32070544 -71424430 + AT_rich Low_complexity Low_complexity 1 53 0 1 829 427 286 6 23 chr15 32071041 32071213 -71423761 + (TG)n Simple_repeat Simple_repeat 2 170 0 1 829 301 269 0 12 chr15 32071252 32071425 -71423549 + (TG)n Simple_repeat Simple_repeat 2 172 0 1 829 448 288 0 43 chr15 32071456 32071641 -71423333 + (TG)n Simple_repeat Simple_repeat 1 177 0 1 829 473 305 148 105 chr15 32071725 32072069 -71422905 + MTE2b LTR MaLR 1 359 -20 1 829 25 31 0 0 chr15 32072309 32072341 -71422633 + AT_rich Low_complexity Low_complexity 1 32 0 1 829 867 46 0 0 chr15 32072558 32072666 -71422308 + (TTCCC)n Simple_repeat Simple_repeat 4 111 0 1 829 584 260 65 0 chr15 32072971 32073125 -71421849 - B4A SINE B4 -126 166 3 1 829 485 291 119 53 chr15 32073248 32073887 -71421087 - L1_Mur3 LINE L1 -2575 3305 2625 1 829 282 322 48 36 chr15 32073934 32074185 -71420789 - L1_Mur3 LINE L1 -3354 2526 2273 1 829 272 298 79 26 chr15 32074570 32074921 -71420053 - L1M2c LINE L1 -3933 2556 2099 1 829 5592 212 87 45 chr15 32075064 32075252 -71419722 - Lx9 LINE L1 0 7644 7473 1 829 533 115 0 11 chr15 32075252 32075340 -71419634 + (TCTA)n Simple_repeat Simple_repeat 3 89 0 1 829 5592 212 87 45 chr15 32075340 32076715 -71418259 - Lx9 LINE L1 -172 7472 6016 1 829 285 128 0 0 chr15 32077197 32077244 -71417730 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 829 381 320 73 8 chr15 32077249 32077372 -71417602 - RSINE1 SINE B4 -33 132 2 1 829 1764 175 32 0 chr15 32077397 32077706 -71417268 + Lx LINE L1 6336 6654 0 1 829 333 68 0 0 chr15 32078113 32078157 -71416817 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 829 246 310 35 12 chr15 32078538 32078623 -71416351 + MLT1I LTR MaLR 260 346 -65 1 829 675 328 125 37 chr15 32078640 32079121 -71415853 + MLT1H LTR MaLR 19 541 -8 1 829 554 300 60 23 chr15 32079818 32080119 -71414855 - MLT1D LTR MaLR 0 654 314 1 829 908 236 181 8 chr15 32080465 32080725 -71414249 - ORR1D2 LTR MaLR -13 357 53 1 829 1524 306 70 41 chr15 32081099 32081912 -71413062 - Lx8 LINE L1 -907 6566 5730 1 829 363 96 0 0 chr15 32081914 32081966 -71413008 + (CATTG)n Simple_repeat Simple_repeat 3 54 0 1 829 1189 287 94 20 chr15 32081982 32082441 -71412533 + Lx8 LINE L1 6981 7473 0 1 829 262 379 0 143 chr15 32082453 32082607 -71412367 + B1F2 SINE Alu 12 143 -6 1 829 337 272 129 18 chr15 32083824 32084041 -71410933 + MIRb SINE MIR 3 245 -23 1 829 26 30 0 0 chr15 32084245 32084278 -71410696 + AT_rich Low_complexity Low_complexity 1 33 0 1 829 1734 135 59 26 chr15 32084312 32084585 -71410389 - Lx4A LINE L1 -2 7056 6775 1 829 421 269 92 23 chr15 32084607 32084824 -71410150 - L1MB3 LINE L1 -173 6010 5779 1 829 233 189 36 54 chr15 32084899 32084955 -71410019 - MIRm SINE MIR -3 273 219 1 829 1115 250 99 38 chr15 32085339 32085688 -71409286 + ORR1D2 LTR MaLR 2 394 0 1 829 28 48 0 0 chr15 32085917 32085959 -71409015 + AT_rich Low_complexity Low_complexity 1 42 0 1 829 479 290 21 59 chr15 32086016 32086254 -71408720 - L1ME2 LINE L1 -55 6109 5881 1 829 250 308 9 19 chr15 32086297 32086403 -71408571 - L1ME2 LINE L1 -719 5725 5621 1 829 309 289 104 0 chr15 32086925 32087060 -71407914 - L1MA5 LINE L1 -13 6287 6139 1 829 633 257 61 14 chr15 32087221 32087434 -71407540 + L1MA8 LINE L1 5448 5670 -627 1 829 1479 58 16 0 chr15 32087428 32087618 -71407356 - L1_Mus1 LINE L1 -532 6035 5843 1 829 4290 78 6 0 chr15 32087618 32088144 -71406830 + L1_Mus1 LINE L1 6038 6566 -1 1 829 449 14 42 14 chr15 32088256 32088327 -71406647 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 829 325 290 94 24 chr15 32088438 32088565 -71406409 - B3A SINE B2 0 198 63 1 829 269 280 70 0 chr15 32088584 32088684 -71406290 + L1MA8 LINE L1 5826 5932 -359 1 829 1235 264 57 55 chr15 32089322 32089618 -71405356 + L1MB3 LINE L1 5554 5856 -327 1 829 1112 184 82 5 chr15 32089618 32089826 -71405148 + URR1A DNA MER1_type 3 226 0 1 829 1235 264 57 55 chr15 32089826 32090113 -71404861 + L1MB3 LINE L1 5857 6138 -45 1 829 2900 226 69 43 chr15 32090141 32090853 -71404121 + RMER1B Other Other 5 734 -332 1 829 391 229 127 9 chr15 32090856 32090966 -71404008 + RMER1B Other Other 921 1043 -23 1 829 223 319 28 0 chr15 32091032 32091104 -71403870 + ID4_ SINE ID 10 83 0 1 829 180 77 0 0 chr15 32091130 32091156 -71403818 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 1 829 1308 174 5 0 chr15 32091511 32091729 -71403245 + URR1B DNA MER1_type 6 224 -1 1 829 251 269 14 43 chr15 32092322 32092392 -71402582 + B1F2 SINE Alu 2 69 -80 1 829 243 0 0 0 chr15 32092894 32092921 -71402053 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 1 829 715 228 11 46 chr15 32093593 32093768 -71401206 + Lx8 LINE L1 7169 7337 -136 1 829 241 204 0 20 chr15 32095298 32095348 -71399626 + LTR86A1 LTR ERVL 460 508 -5 1 829 1456 285 57 55 chr15 32095977 32096541 -71398433 + Lx8 LINE L1 6635 7199 -274 1 829 305 0 0 48 chr15 32096579 32096621 -71398353 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1 829 229 178 0 22 chr15 32099809 32099855 -71395119 - L3 LINE CR1 -3518 971 927 1 829 846 0 0 0 chr15 32100798 32100892 -71394082 + (CCCTAG)n Simple_repeat Simple_repeat 4 97 0 1 829 517 240 74 0 chr15 32100925 32101046 -71393928 - B1_Mur1 SINE Alu -13 136 7 1 829 268 276 159 11 chr15 32100991 32101079 -71393895 - B4A SINE B4 -146 146 46 1 829 227 274 16 0 chr15 32101585 32101647 -71393327 + GA-rich Low_complexity Low_complexity 1 63 0 1 829 199 302 20 59 chr15 32101989 32102091 -71392883 + L3 LINE CR1 3744 3841 -648 1 829 290 225 97 14 chr15 32103077 32103149 -71391825 + ID2 SINE ID 3 80 -3 1 829 892 316 31 54 chr15 32103165 32103459 -71391515 + B4 SINE B4 6 292 0 1 829 3110 79 38 13 chr15 32103636 32104033 -71390941 - MTB_Mm LTR MaLR 0 407 1 1 829 1957 133 135 36 chr15 32105220 32105554 -71389420 - ORR1B2 LTR MaLR 0 367 1 1 829 266 319 25 49 chr15 32105604 32105726 -71389248 + MER20 DNA MER1_type 4 122 -97 1 829 453 81 0 0 chr15 32106073 32106135 -71388839 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 829 791 291 7 103 chr15 32106194 32106496 -71388478 - B4 SINE B4 -16 276 4 1 829 407 286 27 7 chr15 32108117 32108265 -71386709 + L1MD1 LINE L1 6084 6234 -8 1 829 513 0 0 0 chr15 32108919 32108976 -71385998 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 829 509 282 57 39 chr15 32109764 32109993 -71384981 - L1MA4 LINE L1 -362 5938 5706 1 829 291 302 0 80 chr15 32110430 32110567 -71384407 + MLT1A LTR MaLR 67 192 -182 1 829 3987 132 92 20 chr15 32111086 32111789 -71383185 - RMER6A LTR ERVK -2 754 1 1 829 345 135 38 19 chr15 32112307 32112413 -71382561 + (TCTCTG)n Simple_repeat Simple_repeat 1 108 0 1 830 387 0 0 0 chr15 32113049 32113092 -71381882 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1 830 199 194 0 0 chr15 32113853 32113889 -71381085 + MIRc SINE MIR 118 153 -115 1 830 357 158 0 0 chr15 32114146 32114228 -71380746 + CT-rich Low_complexity Low_complexity 1 82 0 1 830 543 272 171 19 chr15 32114352 32114759 -71380215 + L1MB4 LINE L1 5694 6152 -28 1 830 234 62 0 0 chr15 32114772 32114804 -71380170 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 830 688 215 30 0 chr15 32115050 32115185 -71379789 - B1_Mm SINE Alu -6 141 3 1 830 306 250 54 11 chr15 32115339 32115432 -71379542 + CT-rich Low_complexity Low_complexity 3 99 0 1 830 21 0 0 0 chr15 32116804 32116825 -71378149 + AT_rich Low_complexity Low_complexity 1 21 0 1 830 183 80 0 0 chr15 32117832 32117857 -71377117 + (TGG)n Simple_repeat Simple_repeat 2 26 0 1 830 229 237 66 0 chr15 32117897 32117973 -71377001 - L1MA6 LINE L1 -7 6293 6213 1 830 578 236 59 15 chr15 32118111 32118292 -71376682 - L1MA6 LINE L1 -449 5851 5627 1 830 229 333 97 0 chr15 32118845 32118959 -71376015 - MER20 DNA MER1_type -61 158 34 1 830 438 143 0 48 chr15 32119526 32119629 -71375345 + CT-rich Low_complexity Low_complexity 1 98 0 1 830 662 301 138 56 chr15 32120271 32120627 -71374347 + MTD LTR MaLR 20 404 -15 1 830 534 226 27 7 chr15 32120839 32120986 -71373988 - Arthur1 DNA Tip100 -269 3678 3529 1 830 317 181 22 88 chr15 32121204 32121295 -71373679 + MTD LTR MaLR 1 85 -334 1 830 402 74 0 0 chr15 32121646 32121700 -71373274 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 830 283 352 55 0 chr15 32122752 32122880 -71372094 + MER5A DNA MER1_type 55 189 0 1 830 250 133 0 0 chr15 32124777 32124822 -71370152 - B3 SINE B2 -171 45 1 1 830 24 0 0 0 chr15 32126079 32126103 -71368871 + AT_rich Low_complexity Low_complexity 1 24 0 1 830 372 43 0 0 chr15 32126228 32126274 -71368700 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 830 360 0 0 0 chr15 32126274 32126313 -71368661 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 830 1600 131 115 16 chr15 32126636 32127002 -71367972 + RMER17C LTR ERVK 9 410 0 1 830 701 323 9 35 chr15 32127143 32127371 -71367603 - B4A SINE B4 0 292 71 1 830 207 288 15 0 chr15 32128052 32128118 -71366856 - L2b LINE L2 -5 3370 3304 1 830 377 297 99 39 chr15 32128913 32129254 -71365720 - MER31A LTR ERV1 -90 376 11 1 830 214 308 38 13 chr15 32129265 32129344 -71365630 - ID4 SINE ID -1 82 2 2 830 541 282 22 11 chr15 32129840 32130023 -71364951 + B3 SINE B2 32 216 0 2 830 2262 104 6 6 chr15 32130287 32130625 -71364349 + Lx3A LINE L1 6642 6979 -2 2 830 624 81 0 0 chr15 32130643 32130730 -71364244 + (GAAA)n Simple_repeat Simple_repeat 4 90 0 2 830 360 138 0 0 chr15 32131238 32131303 -71363671 + (T)n Simple_repeat Simple_repeat 1 65 0 2 830 330 283 10 39 chr15 32131809 32131912 -71363062 - PB1D7 SINE Alu 0 120 21 2 830 237 311 45 38 chr15 32131932 32132089 -71362885 - L1M5 LINE L1 -978 5168 5011 2 830 2227 152 56 7 chr15 32132339 32132784 -71362190 - RLTR28 LTR ERVL -31 493 27 2 830 442 176 0 0 chr15 32132936 32133010 -71361964 + ID4_ SINE ID 2 75 -8 2 830 331 304 66 48 chr15 32133902 32134130 -71360844 - ORR1E LTR MaLR -122 237 6 2 830 244 290 105 0 chr15 32135733 32135857 -71359117 - MIRb SINE MIR -95 173 37 2 830 493 234 139 68 chr15 32136062 32136176 -71358798 - L1MA7 LINE L1 0 6291 6168 2 830 955 235 152 24 chr15 32136176 32136512 -71358462 + MTE2a LTR MaLR 1 379 0 2 830 493 234 139 68 chr15 32136512 32136649 -71358325 - L1MA7 LINE L1 -124 6167 6022 2 830 700 166 26 0 chr15 32137622 32137773 -71357201 + (TATG)n Simple_repeat Simple_repeat 4 158 0 2 830 312 303 61 0 chr15 32138298 32138430 -71356544 - RSINE1 SINE B4 -24 141 2 2 830 39525 40 24 3 chr15 32138539 32144601 -71350373 - L1Md_T LINE L1 0 6582 390 2 830 1227 61 0 0 chr15 32144728 32144875 -71350099 - B1_Mus1 SINE Alu 0 148 2 2 830 576 0 0 0 chr15 32145098 32145162 -71349812 + (TC)n Simple_repeat Simple_repeat 1 64 0 2 830 295 141 62 0 chr15 32145174 32145238 -71349736 + MLT1J LTR MaLR 445 512 0 2 830 963 255 37 4 chr15 32146857 32147101 -71347873 - B4A SINE B4 0 292 41 2 830 265 24 23 23 chr15 32147610 32147653 -71347321 + (CAAAC)n Simple_repeat Simple_repeat 2 44 0 2 830 459 52 0 0 chr15 32147796 32147854 -71347120 + (GGA)n Simple_repeat Simple_repeat 1 58 0 2 830 405 289 71 29 chr15 32148314 32148524 -71346450 + L1MC1 LINE L1 6034 6252 -81 2 830 1022 281 125 47 chr15 32148895 32149717 -71345257 - Charlie2b DNA MER1_type -74 2708 1823 2 830 591 206 40 47 chr15 32150645 32150793 -71344181 + B1_Mur1 SINE Alu 2 148 -1 2 830 231 61 0 0 chr15 32150968 32151001 -71343973 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 2 830 253 281 0 0 chr15 32152016 32152073 -71342901 + CT-rich Low_complexity Low_complexity 2 58 0 2 830 1041 190 19 5 chr15 32152412 32152624 -71342350 + URR1A DNA MER1_type 1 215 -11 2 830 357 24 0 0 chr15 32153951 32153993 -71340981 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 830 420 20 0 0 chr15 32153993 32154042 -71340932 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 830 497 150 204 104 chr15 32154429 32154630 -71340344 - MTD LTR MaLR 0 419 199 2 830 198 171 0 0 chr15 32154645 32154686 -71340288 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 830 441 0 0 0 chr15 32154701 32154750 -71340224 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 2 830 489 304 75 11 chr15 32154762 32154948 -71340026 - MTD LTR MaLR -219 200 3 2 830 322 281 10 10 chr15 32155105 32155209 -71339765 + L5 LINE RTE 2024 2127 -138 2 830 267 287 185 7 chr15 32155542 32155693 -71339281 - L2a LINE L2 -4 3422 3245 2 830 802 210 20 65 chr15 32155747 32155946 -71339028 + B3 SINE B2 10 199 -17 2 830 350 238 28 1 chr15 32156034 32156131 -71338843 + PB1D10 SINE Alu 13 114 -6 2 830 321 339 18 0 chr15 32156152 32156264 -71338710 + Tigger5 DNA MER2_type 82 195 -2211 2 830 3879 97 42 7 chr15 32157131 32157702 -71337272 - L1_Mus4 LINE L1 0 6636 6046 2 830 303 140 0 0 chr15 32157880 32157930 -71337044 + (TTTC)n Simple_repeat Simple_repeat 3 52 0 2 830 530 67 13 0 chr15 32158184 32158259 -71336715 + (TCC)n Simple_repeat Simple_repeat 3 78 0 2 830 849 75 0 0 chr15 32158302 32158422 -71336552 - B1_Mus2 SINE Alu -27 120 1 2 830 415 207 0 110 chr15 32158310 32158446 -71336528 - MT2B LTR ERVL -337 264 144 2 830 185 250 0 0 chr15 32158446 32158486 -71336488 + L2 LINE L2 1982 2021 -1398 2 830 671 184 7 0 chr15 32158544 32158685 -71336289 + (TCTCTG)n Simple_repeat Simple_repeat 1 142 0 2 830 485 179 6 0 chr15 32158709 32158871 -71336103 + CT-rich Low_complexity Low_complexity 2 164 0 2 830 427 250 8 0 chr15 32158874 32159002 -71335972 + (CCCCAG)n Simple_repeat Simple_repeat 6 134 0 2 830 439 278 189 0 chr15 32159896 32160076 -71334898 + ORR1E LTR MaLR 20 233 -126 2 830 186 189 0 0 chr15 32160602 32160639 -71334335 + CT-rich Low_complexity Low_complexity 3 39 0 2 830 1082 306 14 19 chr15 32160683 32161049 -71333925 + MTE2b LTR MaLR 1 364 -15 2 830 241 278 13 53 chr15 32162266 32162342 -71332632 + MER5A DNA MER1_type 113 185 -4 2 830 604 212 288 0 chr15 32162356 32162526 -71332448 + MER58A DNA MER1_type 3 221 -3 2 830 2219 72 9 51 chr15 32162708 32163044 -71331930 + RLTRETN_Mm LTR ERVK 1 322 0 2 830 252 271 85 0 chr15 32163539 32163598 -71331376 + B1F2 SINE Alu 21 84 -65 2 830 725 156 21 12 chr15 32163609 32163856 -71331118 + (TG)n Simple_repeat Simple_repeat 1 249 0 2 830 411 250 26 13 chr15 32163867 32164021 -71330953 + (TG)n Simple_repeat Simple_repeat 2 157 0 2 830 21 36 0 0 chr15 32164368 32164396 -71330578 + AT_rich Low_complexity Low_complexity 1 28 0 2 830 1656 243 80 28 chr15 32164510 32165051 -71329923 - Lx7 LINE L1 -1 7695 7127 2 830 267 336 46 28 chr15 32167161 32167446 -71327528 - L1M5 LINE L1 -948 5198 4909 2 830 556 306 22 6 chr15 32168479 32168660 -71326314 + MLT-int LTR MaLR 228 411 -1324 2 830 1250 251 43 26 chr15 32168739 32169091 -71325883 - MTD LTR MaLR -5 414 57 2 830 270 277 0 0 chr15 32169119 32169184 -71325790 - MTEa LTR MaLR -257 122 58 2 830 465 19 0 0 chr15 32170251 32170305 -71324669 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 830 204 271 0 0 chr15 32171751 32171799 -71323175 + G-rich Low_complexity Low_complexity 2 49 0 2 830 1329 146 27 0 chr15 32172137 32172357 -71322617 - URR1A DNA MER1_type 0 226 1 2 830 317 138 127 4 chr15 32172612 32172692 -71322282 - PB1D10 SINE Alu -15 105 17 2 830 31 0 0 0 chr15 32172713 32172744 -71322230 + AT_rich Low_complexity Low_complexity 1 31 0 2 830 222 156 31 15 chr15 32174463 32174528 -71320446 + (CGGGG)n Simple_repeat Simple_repeat 3 68 0 2 830 24 0 0 0 chr15 32176642 32176666 -71318308 + AT_rich Low_complexity Low_complexity 1 24 0 2 830 207 0 0 0 chr15 32178670 32178693 -71316281 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 830 21 0 0 0 chr15 32179759 32179780 -71315194 + AT_rich Low_complexity Low_complexity 1 21 0 2 830 3346 30 2 39 chr15 32180172 32180581 -71314393 + MTA_Mm LTR MaLR 1 394 -2 2 830 851 297 97 18 chr15 32182549 32182930 -71312044 + L1ME1 LINE L1 5753 6163 -16 2 830 3252 128 122 13 chr15 32183444 32183757 -71311217 + RMER6C LTR ERVK 8 346 -344 2 830 285 51 0 0 chr15 32183757 32183796 -71311178 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 830 420 20 0 0 chr15 32183796 32183844 -71311130 + (GA)n Simple_repeat Simple_repeat 2 50 0 2 830 3252 128 122 13 chr15 32183844 32184145 -71310829 + RMER6C LTR ERVK 347 689 -1 2 830 204 40 0 0 chr15 32184546 32184571 -71310403 + (T)n Simple_repeat Simple_repeat 1 25 0 2 830 201 147 0 0 chr15 32185300 32185334 -71309640 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 2 830 1171 48 0 20 chr15 32185809 32185959 -71309015 - B1_Mm SINE Alu 0 147 1 2 830 514 276 44 116 chr15 32185978 32186203 -71308771 + ID_B1 SINE B4 5 213 -11 2 830 1284 148 41 14 chr15 32186315 32186535 -71308439 - URR1A DNA MER1_type 0 226 1 2 830 263 313 20 20 chr15 32186668 32186821 -71308153 + (TATATG)n Simple_repeat Simple_repeat 6 158 0 2 830 385 269 55 110 chr15 32186914 32187060 -71307914 - B4 SINE B4 -153 139 2 2 830 429 36 0 0 chr15 32188805 32188860 -71306114 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 830 189 0 0 0 chr15 32191101 32191122 -71303852 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2 830 545 0 15 0 chr15 32191909 32191974 -71303000 + (TC)n Simple_repeat Simple_repeat 2 67 0 2 830 225 65 0 0 chr15 32191974 32192004 -71302970 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 830 297 294 0 0 chr15 32192006 32192074 -71302900 - ID4 SINE ID -14 69 2 2 830 1212 48 7 0 chr15 32192940 32193087 -71301887 + B1_Mus1 SINE Alu 1 148 0 2 830 234 0 0 0 chr15 32197868 32197894 -71297080 + (T)n Simple_repeat Simple_repeat 1 26 0 2 830 2908 42 36 0 chr15 32198215 32198571 -71296403 - L1_Mus1 LINE L1 -2 6565 6197 2 830 231 268 154 67 chr15 32198869 32198937 -71296037 - MER58A DNA MER1_type -65 159 82 2 830 264 77 0 0 chr15 32198937 32198976 -71295998 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 830 231 268 154 67 chr15 32198976 32199011 -71295963 - MER58A DNA MER1_type -143 81 47 2 830 366 23 0 0 chr15 32199245 32199288 -71295686 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 830 632 309 53 84 chr15 32199420 32199837 -71295137 - MLT1C LTR MaLR 0 467 64 2 830 581 269 93 16 chr15 32202126 32202372 -71292602 - L1MC3 LINE L1 -169 7616 7352 2 830 274 331 67 44 chr15 32202609 32202801 -71292173 + B4A SINE B4 84 288 -4 2 830 409 115 0 25 chr15 32203400 32203480 -71291494 + (TG)n Simple_repeat Simple_repeat 1 78 0 2 830 396 0 0 0 chr15 32204528 32204572 -71290402 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 830 210 37 0 0 chr15 32205874 32205901 -71289073 + (TCTG)n Simple_repeat Simple_repeat 1 27 0 2 830 612 73 0 0 chr15 32205901 32205983 -71288991 + (TG)n Simple_repeat Simple_repeat 2 83 0 2 830 710 284 76 53 chr15 32205984 32206248 -71288726 - B4A SINE B4 -22 270 1 3 830 1332 181 66 57 chr15 32207125 32207215 -71287759 + Lx7 LINE L1 7360 7449 -247 3 830 2274 145 0 14 chr15 32207215 32207565 -71287409 - ORR1A1 LTR MaLR -1 345 1 3 830 1332 181 66 57 chr15 32207565 32207808 -71287166 + Lx7 LINE L1 7450 7696 0 3 830 554 338 111 31 chr15 32208886 32209274 -71285700 - MLT2B2 LTR ERVL 0 515 97 3 830 268 314 97 36 chr15 32209730 32209925 -71285049 + MLT1D LTR MaLR 24 230 -275 3 830 215 342 25 17 chr15 32211443 32211562 -71283412 + MIRc SINE MIR 20 139 -129 3 830 387 60 0 0 chr15 32214120 32214170 -71280804 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 3 830 435 224 64 18 chr15 32216793 32216902 -71278072 + Lx9 LINE L1 6519 6632 -1012 3 830 809 138 0 25 chr15 32216909 32217072 -71277902 + (TA)n Simple_repeat Simple_repeat 1 159 0 3 830 199 144 35 35 chr15 32217445 32217560 -71277414 + (TA)n Simple_repeat Simple_repeat 1 115 0 3 830 392 183 28 17 chr15 32217584 32217762 -71277212 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 830 189 0 0 0 chr15 32217832 32217853 -71277121 + (GGA)n Simple_repeat Simple_repeat 1 21 0 3 830 345 253 21 21 chr15 32221803 32221900 -71273074 + PB1D10 SINE Alu 4 100 -17 3 830 447 310 17 8 chr15 32225742 32225859 -71269115 + RSINE1 SINE B4 3 120 -45 3 830 984 48 0 0 chr15 32225902 32226028 -71268946 + (CA)n Simple_repeat Simple_repeat 1 126 0 3 830 399 41 0 0 chr15 32226028 32226076 -71268898 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 830 571 306 18 23 chr15 32226321 32226542 -71268432 - LTR40a LTR ERVL -251 268 49 3 830 498 343 49 56 chr15 32229262 32229528 -71265446 + MER2 DNA MER2_type 7 270 -75 3 830 4686 95 52 1 chr15 32229683 32230350 -71264624 - L1_Mus3 LINE L1 -4 6634 5934 3 830 527 266 59 50 chr15 32230766 32231223 -71263751 - L1MC3 LINE L1 -18 6315 5839 3 830 471 113 0 0 chr15 32231238 32231309 -71263665 + (TCCCC)n Simple_repeat Simple_repeat 1 71 0 3 830 1334 232 22 28 chr15 32231538 32231862 -71263112 + MTEa LTR MaLR 35 356 -23 3 830 263 296 50 100 chr15 32236786 32236966 -71258008 - MER53 DNA hAT -6 187 17 3 830 708 80 0 0 chr15 32237513 32237613 -71257361 + (TTTTG)n Simple_repeat Simple_repeat 2 101 0 3 830 478 263 108 35 chr15 32237963 32238387 -71256587 - L1MA6 LINE L1 -34 6263 5802 3 830 525 58 0 0 chr15 32238399 32238468 -71256506 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 830 212 86 0 28 chr15 32239881 32239917 -71255057 + (GGGA)n Simple_repeat Simple_repeat 3 37 0 3 830 279 0 0 0 chr15 32240149 32240180 -71254794 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 830 21 57 0 0 chr15 32240336 32240371 -71254603 + AT_rich Low_complexity Low_complexity 1 35 0 3 830 327 49 0 0 chr15 32240372 32240413 -71254561 + (GA)n Simple_repeat Simple_repeat 1 41 0 3 830 808 291 85 43 chr15 32242819 32243416 -71251558 - L1M2 LINE L1 -793 5507 4862 3 830 186 43 0 0 chr15 32243416 32243439 -71251535 + (TTTC)n Simple_repeat Simple_repeat 4 26 0 3 103 808 313 74 43 chr15 32243439 32243762 -71251212 - L1M2 LINE L1 -1251 4892 4533 3 831 252 92 30 30 chr15 32244271 32244338 -71250636 + T-rich Low_complexity Low_complexity 2 68 0 3 831 518 270 0 8 chr15 32244886 32245013 -71249961 + B1_Mur1 SINE Alu 3 128 -21 3 831 236 242 212 0 chr15 32244980 32245046 -71249928 + B1_Mur2 SINE Alu 67 146 -3 3 831 22 0 0 0 chr15 32246530 32246552 -71248422 + AT_rich Low_complexity Low_complexity 1 22 0 3 831 198 0 0 0 chr15 32246961 32246983 -71247991 + (CTCTG)n Simple_repeat Simple_repeat 1 22 0 3 831 183 42 0 0 chr15 32247679 32247703 -71247271 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 3 831 302 331 42 48 chr15 32247806 32248095 -71246879 - L1M2 LINE L1 -2473 3670 3384 3 831 1429 105 4 13 chr15 32248221 32248452 -71246522 - RLTR10E LTR ERVK -3 308 80 3 831 1478 28 0 16 chr15 32248452 32248636 -71246338 + L1Md_F3 LINE L1 6390 6570 -14 3 831 316 20 0 73 chr15 32248654 32248709 -71246265 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 3 831 1149 75 6 0 chr15 32248709 32248868 -71246106 - B2_Mm1a SINE B2 -33 160 1 3 831 23 33 0 0 chr15 32249429 32249459 -71245515 + AT_rich Low_complexity Low_complexity 1 30 0 3 831 822 329 24 72 chr15 32251780 32252239 -71242735 - MER67D LTR ERV1 -77 437 1 3 831 375 312 51 42 chr15 32253667 32253881 -71241093 + MER20 DNA MER1_type 1 216 -3 3 831 884 127 0 6 chr15 32255061 32255227 -71239747 + (TG)n Simple_repeat Simple_repeat 1 165 0 3 831 1491 340 17 20 chr15 32255297 32255985 -71238989 - Lx8 LINE L1 -163 7310 6625 3 831 280 158 0 81 chr15 32255998 32256060 -71238914 + Lx8 LINE L1 6131 6187 -1286 3 831 1248 264 57 42 chr15 32256180 32256584 -71238390 - Lx8 LINE L1 -860 6613 6204 3 831 224 234 0 0 chr15 32256593 32256640 -71238334 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 831 252 0 0 0 chr15 32257668 32257696 -71237278 + (TC)n Simple_repeat Simple_repeat 1 28 0 3 831 459 0 0 0 chr15 32257975 32258026 -71236948 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 831 346 281 157 0 chr15 32261052 32261173 -71233801 + MER82 DNA MER2_type 7 146 -507 3 831 516 313 64 29 chr15 32261250 32261454 -71233520 - B4A SINE B4 -18 274 64 3 831 529 320 81 24 chr15 32261681 32261880 -71233094 + B4 SINE B4 1 213 -79 3 831 510 218 0 56 chr15 32261880 32262006 -71232968 + PB1D9 SINE Alu 1 119 -1 3 831 529 320 81 24 chr15 32262006 32262017 -71232957 + B4 SINE B4 214 223 -69 3 831 450 49 0 0 chr15 32262097 32262158 -71232816 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 831 321 352 93 45 chr15 32262159 32262406 -71232568 + MER82 DNA MER2_type 395 653 0 3 831 1832 146 49 12 chr15 32262819 32263165 -71231809 - ORR1B2 LTR MaLR -8 359 1 3 831 659 318 94 40 chr15 32267105 32267607 -71227367 - L1MA9 LINE L1 -216 6084 5556 3 831 198 91 0 0 chr15 32267998 32268031 -71226943 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 3 831 222 105 0 0 chr15 32268772 32268810 -71226164 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 831 230 133 0 43 chr15 32270031 32270078 -71224896 + T-rich Low_complexity Low_complexity 6 50 0 3 831 1171 48 14 7 chr15 32270078 32270224 -71224750 - B1_Mm SINE Alu 0 147 1 3 831 296 343 35 83 chr15 32272093 32272322 -71222652 - MER77 LTR ERVL -5 602 385 3 831 496 333 106 12 chr15 32272357 32272603 -71222371 - MER77 LTR ERVL -298 309 41 3 831 546 16 0 0 chr15 32272968 32273031 -71221943 + (TATG)n Simple_repeat Simple_repeat 2 64 0 3 831 204 40 0 0 chr15 32274756 32274781 -71220193 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 3 831 1073 91 0 0 chr15 32274781 32274924 -71220050 - B1_Mus1 SINE Alu -3 145 3 3 831 666 273 24 0 chr15 32276516 32276681 -71218293 + B3A SINE B2 5 173 -25 3 831 433 155 39 0 chr15 32277668 32277771 -71217203 + GA-rich Low_complexity Low_complexity 1 107 0 3 831 256 261 99 0 chr15 32278363 32278488 -71216486 - MIR SINE MIR -93 169 34 3 831 444 369 18 61 chr15 32278700 32278928 -71216046 - MER58A DNA MER1_type -6 218 1 3 831 509 225 173 0 chr15 32279541 32279732 -71215242 + Lx9 LINE L1 7419 7642 -2 3 831 578 79 11 0 chr15 32280200 32280289 -71214685 + (TG)n Simple_repeat Simple_repeat 1 90 0 3 831 533 299 31 0 chr15 32280290 32280417 -71214557 - RSINE1 SINE B4 -25 140 10 3 831 635 272 83 0 chr15 32281667 32281836 -71213138 - B3A SINE B2 -11 187 5 3 831 540 0 0 0 chr15 32282206 32282266 -71212708 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 3 831 329 365 143 19 chr15 32284666 32285308 -71209666 + L2a LINE L2 2275 2996 -423 3 831 266 315 47 62 chr15 32285457 32285650 -71209324 + L2a LINE L2 3222 3411 -15 3 831 229 268 71 24 chr15 32286416 32286500 -71208474 - PB1D10 SINE Alu -2 115 28 3 831 208 273 0 18 chr15 32286951 32286963 -71208011 + (TATATG)n Simple_repeat Simple_repeat 1 12 0 3 831 285 29 0 0 chr15 32286963 32286997 -71207977 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 831 208 273 0 18 chr15 32286997 32287040 -71207934 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 3 831 647 154 29 23 chr15 32287041 32287075 -71207899 + (CATATA)n Simple_repeat Simple_repeat 3 38 0 3 831 1062 73 5 27 chr15 32287075 32287259 -71207715 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 831 647 154 29 23 chr15 32287259 32287341 -71207633 + (CATATA)n Simple_repeat Simple_repeat 3 85 0 3 831 983 109 23 0 chr15 32287341 32287515 -71207459 + (CA)n Simple_repeat Simple_repeat 1 178 0 3 831 647 154 29 23 chr15 32287515 32287555 -71207419 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 3 831 964 98 29 0 chr15 32287555 32287728 -71207246 + (CA)n Simple_repeat Simple_repeat 1 178 0 3 831 647 169 23 5 chr15 32287728 32287788 -71207186 + (CATATA)n Simple_repeat Simple_repeat 1 61 0 3 831 940 71 32 0 chr15 32287788 32287943 -71207031 + (CA)n Simple_repeat Simple_repeat 1 160 0 3 831 491 313 1 6 chr15 32288374 32288510 -71206464 - B1F SINE Alu -12 135 4 3 831 258 344 22 79 chr15 32288510 32288548 -71206426 - MT2B LTR ERVL -445 156 127 3 831 565 276 138 4 chr15 32289072 32289312 -71205662 + RLTR10A LTR ERVK 140 411 0 3 831 515 325 50 50 chr15 32289428 32289587 -71205387 + RSINE1 SINE B4 7 165 0 3 831 831 227 189 125 chr15 32290952 32291051 -71203923 + RLTR18 LTR ERVK 2 88 -528 3 831 356 0 0 22 chr15 32291051 32291096 -71203878 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 831 831 227 189 125 chr15 32291096 32291574 -71203400 + RLTR18 LTR ERVK 89 616 0 3 831 1967 204 3 3 chr15 32292350 32292700 -71202274 + MTC LTR MaLR 1 350 -71 3 831 681 294 35 62 chr15 32293049 32293243 -71201731 + L1MA5 LINE L1 4892 5083 -1060 3 831 459 0 0 0 chr15 32293243 32293294 -71201680 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 831 681 294 35 62 chr15 32293294 32293339 -71201635 + L1MA5 LINE L1 5084 5125 -1018 3 831 1900 148 93 50 chr15 32293339 32293717 -71201257 - ORR1B1 LTR MaLR 0 394 1 3 831 742 280 79 42 chr15 32293717 32294431 -71200543 + L1MA5 LINE L1 5126 5993 -307 3 831 7252 35 2 0 chr15 32294446 32295306 -71199668 + L1Md_T LINE L1 5721 6582 0 3 831 353 202 92 35 chr15 32295710 32295797 -71199177 + B3A SINE B2 3 94 -104 3 831 1422 70 5 0 chr15 32296329 32296516 -71198458 - L1_Mus1 LINE L1 0 6567 6380 4 831 202 216 0 0 chr15 32298516 32298553 -71196421 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 831 277 329 149 13 chr15 32298939 32299093 -71195881 + MLT1A LTR MaLR 179 353 -21 4 831 279 79 0 0 chr15 32299819 32299857 -71195117 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 831 279 330 116 35 chr15 32299866 32300064 -71194910 - MER20 DNA MER1_type -4 215 2 4 831 21 0 0 0 chr15 32301603 32301624 -71193350 + AT_rich Low_complexity Low_complexity 1 21 0 4 831 258 262 0 0 chr15 32303249 32303310 -71191664 - PB1D10 SINE Alu -1 116 56 4 831 572 286 93 68 chr15 32303390 32303779 -71191195 - RLTR11A2 LTR ERVK -25 416 3 4 831 7237 22 0 4 chr15 32304837 32305662 -71189312 - RLTR13B2 LTR ERVK 0 822 1 4 831 225 0 0 0 chr15 32306671 32306696 -71188278 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 4 831 532 263 28 128 chr15 32307581 32307760 -71187214 - RSINE1 SINE B4 0 165 5 4 831 504 273 51 51 chr15 32308289 32308486 -71186488 - B3A SINE B2 0 198 2 4 831 1068 255 63 47 chr15 32309223 32309585 -71185389 + ORR1D2 LTR MaLR 3 370 0 4 831 1089 185 108 13 chr15 32310626 32310933 -71184041 - Lx9 LINE L1 0 7644 7309 4 831 200 132 26 0 chr15 32311139 32311177 -71183797 + (TATAA)n Simple_repeat Simple_repeat 4 42 0 4 831 212 288 73 49 chr15 32311685 32311864 -71183110 - MIRb SINE MIR -72 196 7 4 831 25 31 0 0 chr15 32311980 32312012 -71182962 + AT_rich Low_complexity Low_complexity 1 32 0 4 831 432 0 0 0 chr15 32312183 32312231 -71182743 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 831 204 225 0 0 chr15 32312411 32312451 -71182523 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 831 336 237 91 20 chr15 32313671 32313770 -71181204 - L1M4 LINE L1 -455 5723 5618 4 831 488 16 0 16 chr15 32313798 32313860 -71181114 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 4 831 498 128 0 0 chr15 32313870 32313964 -71181010 + (CA)n Simple_repeat Simple_repeat 1 94 0 4 831 555 290 16 8 chr15 32313964 32314078 -71180896 - B3A SINE B2 -33 165 50 4 831 794 113 7 0 chr15 32314454 32314596 -71180378 + (TG)n Simple_repeat Simple_repeat 1 143 0 4 831 347 347 16 0 chr15 32315959 32316083 -71178891 - B1F SINE Alu -8 141 16 4 831 393 22 0 0 chr15 32316163 32316209 -71178765 + (TC)n Simple_repeat Simple_repeat 2 47 0 4 831 474 369 40 76 chr15 32316233 32316535 -71178439 - B4A SINE B4 -1 291 1 4 831 642 338 73 25 chr15 32316666 32317006 -71177968 - Tigger5 DNA MER2_type 0 366 1 4 831 235 220 0 0 chr15 32317565 32317615 -71177359 + CT-rich Low_complexity Low_complexity 1 50 0 4 831 579 181 18 158 chr15 32317662 32317826 -71177148 - B1_Mur2 SINE Alu -7 142 2 4 831 228 67 0 0 chr15 32318334 32318364 -71176610 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 4 831 36283 30 0 0 chr15 32319375 32325814 -71169160 - L1Md_T LINE L1 0 6585 50 4 831 41 48 0 0 chr15 32325893 32325955 -71169019 + AT_rich Low_complexity Low_complexity 1 62 0 4 831 186 43 0 0 chr15 32333854 32333877 -71161097 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 831 975 94 12 18 chr15 32335165 32335328 -71159646 + (TTTCC)n Simple_repeat Simple_repeat 3 164 0 4 831 244 129 94 31 chr15 32335364 32335460 -71159514 + CT-rich Low_complexity Low_complexity 4 105 0 4 831 1326 221 69 65 chr15 32335463 32335927 -71159047 - Lx7 LINE L1 0 7696 7231 4 831 1958 106 30 77 chr15 32335931 32336268 -71158706 - ORR1A4 LTR MaLR -8 321 1 4 831 1973 232 18 20 chr15 32336273 32336721 -71158253 - Lx7 LINE L1 -466 7230 6784 4 831 7332 198 83 10 chr15 32336719 32338997 -71155977 - Lx7 LINE L1 -1085 6611 4159 4 831 3306 201 332 19 chr15 32338999 32340138 -71154836 - Lx7 LINE L1 -2349 3531 2002 4 831 213 39 0 0 chr15 32340138 32340164 -71154810 + (TC)n Simple_repeat Simple_repeat 1 26 0 4 831 3306 201 332 19 chr15 32340164 32340420 -71154554 - Lx7 LINE L1 -3879 2001 1699 4 831 5074 198 44 70 chr15 32340421 32341756 -71153218 - Lx7 LINE L1 -6401 1327 27 4 831 32 0 0 0 chr15 32341923 32341955 -71153019 + AT_rich Low_complexity Low_complexity 1 32 0 4 831 241 174 34 34 chr15 32342526 32342615 -71152359 + (TATAA)n Simple_repeat Simple_repeat 2 90 0 4 831 212 262 33 0 chr15 32342774 32342835 -71152139 - B1_Mus1 SINE Alu -52 96 34 4 831 282 69 34 17 chr15 32343385 32343444 -71151530 + (TTTTTG)n Simple_repeat Simple_repeat 2 61 0 4 831 335 328 16 8 chr15 32343790 32343916 -71151058 - MLT1H1 LTR MaLR -35 520 394 4 831 650 47 0 11 chr15 32344307 32344394 -71150580 + (TTC)n Simple_repeat Simple_repeat 2 87 0 4 831 3221 80 20 5 chr15 32345293 32345694 -71149280 - MTB_Mm LTR MaLR 0 407 1 4 831 612 81 0 0 chr15 32345702 32345789 -71149185 + (CA)n Simple_repeat Simple_repeat 1 87 0 4 831 180 0 0 0 chr15 32345789 32345809 -71149165 + (CTA)n Simple_repeat Simple_repeat 1 20 0 4 831 189 69 0 0 chr15 32345847 32345867 -71149107 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 831 387 0 0 0 chr15 32345867 32345910 -71149064 + (CTA)n Simple_repeat Simple_repeat 1 43 0 4 831 189 69 0 0 chr15 32345910 32345918 -71149056 + (CA)n Simple_repeat Simple_repeat 2 9 0 4 831 2867 172 19 18 chr15 32345961 32346476 -71148498 - RMER20A LTR ERVK 0 516 1 4 831 204 270 16 0 chr15 32346484 32346547 -71148427 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 831 192 268 0 0 chr15 32346576 32346658 -71148316 + (CATA)n Simple_repeat Simple_repeat 1 82 0 4 831 300 263 0 6 chr15 32346693 32346875 -71148099 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 831 264 310 30 0 chr15 32350107 32350207 -71144767 - L1MC LINE L1 -2346 5536 5434 4 831 233 307 113 28 chr15 32353421 32353562 -71141412 - MamRep4096 DNA hAT? -150 276 124 4 831 208 200 0 30 chr15 32354476 32354543 -71140431 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 831 186 43 0 0 chr15 32354650 32354673 -71140301 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 831 322 365 0 17 chr15 32355021 32355138 -71139836 + ID_B1 SINE B4 76 190 -34 4 831 4165 73 27 29 chr15 32355802 32356353 -71138621 - L1_Mus4 LINE L1 -1 6635 6086 4 831 453 313 15 0 chr15 32357289 32357423 -71137551 - L2a LINE L2 -8 3418 3283 4 831 184 345 25 25 chr15 32358035 32358154 -71136820 - L2a LINE L2 -532 2887 2769 4 831 613 319 42 81 chr15 32358446 32358729 -71136245 + B4 SINE B4 1 272 -20 4 831 290 206 21 0 chr15 32358733 32358830 -71136144 + (TCTCTG)n Simple_repeat Simple_repeat 2 100 0 4 831 212 237 0 0 chr15 32359136 32359174 -71135800 + PB1D10 SINE Alu 38 75 -42 4 831 256 311 16 0 chr15 32359250 32359311 -71135663 + ID2 SINE ID 22 83 0 4 831 216 231 0 0 chr15 32359432 32359471 -71135503 + ID SINE ID 26 64 -160 4 831 405 0 0 0 chr15 32359480 32359525 -71135449 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 831 418 292 90 81 chr15 32359539 32359932 -71135042 + L1M4 LINE L1 3521 3916 -2230 4 831 681 196 198 50 chr15 32363776 32363958 -71131016 + B3 SINE B2 2 210 -6 4 831 210 71 0 0 chr15 32363981 32364009 -71130965 + (T)n Simple_repeat Simple_repeat 1 28 0 4 831 3081 184 49 9 chr15 32364015 32364563 -71130411 - Lx3C LINE L1 -2 6974 6405 4 831 879 0 27 0 chr15 32365302 32365413 -71129561 + (TG)n Simple_repeat Simple_repeat 2 115 0 4 831 8296 80 7 5 chr15 32365508 32367398 -71127576 + L1_Mus1 LINE L1 4669 6566 -1 4 831 215 103 0 25 chr15 32368998 32369038 -71125936 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 831 2217 50 0 4 chr15 32369855 32370116 -71124858 - L1Md_F2 LINE L1 0 6582 6323 4 831 464 265 45 91 chr15 32370671 32370870 -71124104 - B3A SINE B2 -5 193 4 4 831 1517 224 61 44 chr15 32371620 32372031 -71122943 + RMER19C LTR ERVK 194 611 0 4 831 1315 221 78 24 chr15 32372031 32372327 -71122647 + MTD LTR MaLR 53 364 -55 4 831 24 32 0 0 chr15 32373818 32373849 -71121125 + AT_rich Low_complexity Low_complexity 1 31 0 4 831 1487 78 10 10 chr15 32374159 32374352 -71120622 + B2_Mm1t SINE B2 1 193 0 4 831 201 114 43 43 chr15 32374570 32374616 -71120358 + T-rich Low_complexity Low_complexity 5 50 0 4 832 357 24 0 0 chr15 32377040 32377082 -71117892 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 832 180 0 0 0 chr15 32377084 32377104 -71117870 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 832 25 65 0 0 chr15 32378014 32378060 -71116914 + AT_rich Low_complexity Low_complexity 1 46 0 4 832 629 306 11 55 chr15 32378182 32378365 -71116609 - B3A SINE B2 -16 182 8 4 832 230 268 0 27 chr15 32378369 32378442 -71116532 + (TATG)n Simple_repeat Simple_repeat 4 74 0 4 832 305 122 64 41 chr15 32378446 32378617 -71116357 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 4 832 912 81 20 0 chr15 32378663 32378811 -71116163 + (TCTA)n Simple_repeat Simple_repeat 1 151 0 4 832 848 259 203 20 chr15 32378992 32379300 -71115674 + ORR1D2 LTR MaLR 1 367 -3 4 832 225 191 85 0 chr15 32379301 32379348 -71115626 - L1M2 LINE L1 -396 5916 5866 4 832 200 207 0 47 chr15 32379390 32379476 -71115498 + (TTAA)n Simple_repeat Simple_repeat 3 84 0 4 832 1154 269 87 15 chr15 32379718 32380107 -71114867 - MTD LTR MaLR -2 417 1 4 832 333 315 26 71 chr15 32380297 32380451 -71114523 - MER77 LTR ERVL -363 244 98 4 832 651 310 78 12 chr15 32380909 32381151 -71113823 + B4 SINE B4 29 286 -6 4 832 270 0 0 0 chr15 32383662 32383692 -71111282 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 832 1101 16 0 0 chr15 32383692 32383818 -71111156 + (GA)n Simple_repeat Simple_repeat 1 127 0 4 832 395 315 140 86 chr15 32383836 32384093 -71110881 - B4 SINE B4 -20 272 2 4 832 184 222 0 43 chr15 32385895 32385989 -71108985 + (TATG)n Simple_repeat Simple_repeat 3 92 0 4 832 513 0 0 0 chr15 32387891 32387948 -71107026 + (GA)n Simple_repeat Simple_repeat 1 57 0 4 832 819 222 193 6 chr15 32388044 32388225 -71106749 + B3 SINE B2 2 216 0 4 832 494 227 13 46 chr15 32389117 32389256 -71105718 + RMER20B LTR ERVK 68 204 -312 5 832 229 211 0 0 chr15 32389912 32389964 -71105010 + T-rich Low_complexity Low_complexity 1 52 0 5 832 210 349 36 12 chr15 32390408 32390492 -71104482 - MIR SINE MIR -161 101 16 5 832 226 284 11 11 chr15 32392432 32392521 -71102453 + MER53 DNA hAT 4 92 -101 5 832 224 347 25 8 chr15 32392659 32392781 -71102193 + MIRb SINE MIR 119 242 -26 5 832 347 340 48 14 chr15 32395202 32395348 -71099626 - MER57E1 LTR ERV1 -219 153 3 5 832 205 100 40 0 chr15 32395419 32395469 -71099505 + (TTTTTG)n Simple_repeat Simple_repeat 4 55 0 5 832 226 102 0 75 chr15 32395577 32395630 -71099344 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 5 832 373 313 0 10 chr15 32396764 32396864 -71098110 + MER58A DNA MER1_type 38 136 -88 5 832 603 27 0 0 chr15 32398214 32398287 -71096687 + (TTTTG)n Simple_repeat Simple_repeat 5 77 0 5 832 223 328 0 30 chr15 32398479 32398545 -71096429 - ID4 SINE ID -4 79 16 5 832 36 23 0 0 chr15 32398797 32398840 -71096134 + AT_rich Low_complexity Low_complexity 1 43 0 5 832 305 321 121 21 chr15 32398851 32398991 -71095983 - B3A SINE B2 -39 159 6 5 832 476 276 44 40 chr15 32399284 32399510 -71095464 + Lx8 LINE L1 7246 7472 -1 5 832 1601 47 0 0 chr15 32399681 32399874 -71095100 + B2_Mm1t SINE B2 1 193 0 5 832 202 152 0 61 chr15 32402086 32402135 -71092839 + A-rich Low_complexity Low_complexity 3 48 0 5 832 591 170 215 32 chr15 32402279 32402498 -71092476 + Lx9 LINE L1 7385 7643 -1 5 832 31 26 0 0 chr15 32402698 32402736 -71092238 + AT_rich Low_complexity Low_complexity 1 38 0 5 832 303 366 57 8 chr15 32402954 32403078 -71091896 - ORR1E LTR MaLR -226 133 4 5 832 695 331 26 74 chr15 32403174 32403445 -71091529 - B4A SINE B4 -3 289 32 5 832 300 102 0 0 chr15 32403505 32403554 -71091420 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 832 359 211 34 26 chr15 32403567 32403684 -71091290 + Lx9 LINE L1 7516 7633 -11 5 832 651 269 61 58 chr15 32405278 32405641 -71089333 + L1MA8 LINE L1 5908 6271 -20 5 832 452 312 62 31 chr15 32405817 32405979 -71088995 + B4 SINE B4 47 213 -79 5 832 403 320 136 19 chr15 32406248 32406933 -71088041 + L1MC4 LINE L1 6798 7562 -480 5 832 207 100 0 0 chr15 32407046 32407076 -71087898 + (T)n Simple_repeat Simple_repeat 1 30 0 5 832 12061 69 6 11 chr15 32407115 32409481 -71085493 - L1Md_F2 LINE L1 -12 6570 4216 5 832 1276 69 23 0 chr15 32409481 32409656 -71085318 - L1_Mus1 LINE L1 -14 6553 6375 5 832 886 279 57 71 chr15 32409870 32410206 -71084768 + ORR1E LTR MaLR 27 357 -2 5 832 270 95 0 0 chr15 32410258 32410300 -71084674 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 832 24 0 0 0 chr15 32410882 32410906 -71084068 + AT_rich Low_complexity Low_complexity 1 24 0 5 832 188 236 11 0 chr15 32411068 32411157 -71083817 + (CA)n Simple_repeat Simple_repeat 1 90 0 5 832 378 120 0 0 chr15 32411156 32411231 -71083743 + (GA)n Simple_repeat Simple_repeat 2 76 0 5 832 435 311 0 6 chr15 32411231 32411412 -71083562 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 832 197 259 0 18 chr15 32411429 32411598 -71083376 + (CA)n Simple_repeat Simple_repeat 1 166 0 5 832 369 0 0 0 chr15 32411600 32411641 -71083333 + (TC)n Simple_repeat Simple_repeat 1 41 0 5 832 432 0 0 0 chr15 32411641 32411688 -71083286 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 832 273 209 0 29 chr15 32412044 32412113 -71082861 + A-rich Low_complexity Low_complexity 1 67 0 5 832 544 289 20 7 chr15 32412692 32412845 -71082129 - RSINE1 SINE B4 -9 156 2 5 832 196 256 0 0 chr15 32416101 32416144 -71078830 + MIRc SINE MIR 92 134 -134 5 832 194 271 0 20 chr15 32416367 32416416 -71078558 - L2c LINE L2 -8 3379 3332 5 832 244 396 61 65 chr15 32416762 32417040 -71077934 - LTR16A1 LTR ERVL -102 354 78 5 832 285 75 0 0 chr15 32417190 32417230 -71077744 + (CCAA)n Simple_repeat Simple_repeat 1 40 0 5 832 186 43 0 0 chr15 32417319 32417342 -71077632 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 5 832 1806 212 73 10 chr15 32418088 32418483 -71076491 + MTC LTR MaLR 1 420 -1 5 832 495 0 0 0 chr15 32418993 32419048 -71075926 + (GA)n Simple_repeat Simple_repeat 1 55 0 5 832 207 0 0 0 chr15 32419418 32419441 -71075533 + (T)n Simple_repeat Simple_repeat 1 23 0 5 832 380 357 42 0 chr15 32419826 32419969 -71075005 + B4A SINE B4 3 151 -141 5 832 447 314 43 43 chr15 32420329 32420562 -71074412 - Lx9 LINE L1 -260 7384 7152 5 832 264 200 126 16 chr15 32420607 32420734 -71074240 + Lx9 LINE L1 7502 7642 -2 5 832 369 290 0 36 chr15 32420749 32420860 -71074114 - MER44D DNA MER2_type -588 117 11 5 832 213 65 0 0 chr15 32421238 32421269 -71073705 + (CCA)n Simple_repeat Simple_repeat 1 31 0 5 832 532 121 0 0 chr15 32421438 32421521 -71073453 + Lx7 LINE L1 6806 6888 -808 5 832 360 241 11 0 chr15 32421523 32421610 -71073364 + Lx7 LINE L1 7156 7243 -453 5 832 240 324 0 0 chr15 32423069 32423140 -71071834 + CT-rich Low_complexity Low_complexity 3 73 0 5 832 866 139 14 7 chr15 32423204 32423349 -71071625 + URR1A DNA MER1_type 81 226 0 5 832 998 73 0 62 chr15 32423584 32423730 -71071244 - B1_Mm SINE Alu 0 147 11 5 832 419 371 92 26 chr15 32424166 32424620 -71070354 + MLT1D LTR MaLR 5 488 -17 5 832 419 274 28 120 chr15 32425364 32425580 -71069394 - MLT1B LTR MaLR -2 388 193 5 832 1030 258 54 74 chr15 32426991 32427333 -71067641 - ORR1E LTR MaLR -10 409 10 5 832 302 299 93 125 chr15 32428122 32428200 -71066774 - MLT1C LTR MaLR -20 447 364 5 832 1752 22 13 30 chr15 32428200 32428430 -71066544 + L1Md_F3 LINE L1 6359 6584 0 5 832 302 299 93 125 chr15 32428430 32428664 -71066310 - MLT1C LTR MaLR -104 363 145 5 832 59 0 0 0 chr15 32428772 32428831 -71066143 + AT_rich Low_complexity Low_complexity 1 59 0 5 832 406 385 40 10 chr15 32430185 32430387 -71064587 - MER20 DNA MER1_type -11 208 1 5 832 483 318 77 139 chr15 32430658 32430968 -71064006 + B4A SINE B4 2 292 0 5 832 291 261 0 0 chr15 32430968 32431102 -71063872 + (CA)n Simple_repeat Simple_repeat 1 134 0 5 832 1750 178 69 11 chr15 32431375 32431722 -71063252 - ORR1B2 LTR MaLR 0 367 1 5 832 242 252 0 7 chr15 32434291 32434439 -71060535 + (TG)n Simple_repeat Simple_repeat 1 147 0 5 832 224 304 14 0 chr15 32434440 32434509 -71060465 + (TATATG)n Simple_repeat Simple_repeat 6 75 0 5 832 204 135 0 0 chr15 32436624 32436661 -71058313 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 5 832 424 252 58 29 chr15 32437256 32437395 -71057579 - MER20 DNA MER1_type -35 184 42 5 832 566 235 26 39 chr15 32438565 32438590 -71056384 + ID_B1 SINE B4 72 224 0 5 832 1024 54 0 0 chr15 32438590 32438720 -71056254 + B1_Mus1 SINE Alu 19 148 0 5 832 7218 81 6 1 chr15 32438979 32440386 -71054588 - L1_Mus1 LINE L1 0 6567 5153 5 832 495 0 0 0 chr15 32440778 32440833 -71054141 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 832 256 320 124 0 chr15 32441067 32441164 -71053810 - MER68 LTR ERVL -247 316 208 5 832 426 318 98 85 chr15 32441845 32442151 -71052823 + MER2B DNA MER2_type 1 310 -26 5 832 339 309 105 8 chr15 32443780 32443904 -71051070 + RMER12 LTR ERVK 716 851 -471 5 832 200 333 37 9 chr15 32443915 32444024 -71050950 + L3 LINE CR1 4185 4296 -193 5 832 242 262 16 16 chr15 32444253 32444315 -71050659 - ID4 SINE ID -20 63 2 5 832 727 186 98 35 chr15 32444333 32444589 -71050385 - Lx9 LINE L1 0 7644 7373 5 832 250 298 68 62 chr15 32446434 32446595 -71048379 - LTR53 LTR ERVL -328 191 30 5 832 26 64 0 0 chr15 32446722 32446769 -71048205 + AT_rich Low_complexity Low_complexity 1 47 0 5 832 570 341 29 5 chr15 32448012 32448221 -71046753 + B4A SINE B4 1 214 -78 5 832 280 41 20 39 chr15 32448222 32448273 -71046701 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 5 832 225 265 24 0 chr15 32448355 32448438 -71046536 + GA-rich Low_complexity Low_complexity 2 86 0 5 832 230 266 114 23 chr15 32448940 32449071 -71045903 - MIR SINE MIR -17 245 103 5 832 193 325 13 13 chr15 32450577 32450655 -71044319 - L2a LINE L2 -2 3424 3347 5 832 869 307 113 0 chr15 32452498 32452807 -71042167 + MER2 DNA MER2_type 1 344 -1 5 832 208 327 115 26 chr15 32452833 32452946 -71042028 + L2c LINE L2 3261 3383 -4 5 832 351 0 0 0 chr15 32452968 32453007 -71041967 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 832 234 0 0 0 chr15 32453007 32453032 -71041942 + (TC)n Simple_repeat Simple_repeat 2 27 0 5 832 1272 276 22 58 chr15 32453682 32453881 -71041093 + Lx8 LINE L1 6319 6515 -958 5 832 221 0 35 0 chr15 32453881 32453910 -71041064 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5 832 1272 276 22 58 chr15 32453910 32454121 -71040853 + Lx8 LINE L1 6516 6714 -759 5 832 270 246 14 0 chr15 32454114 32454183 -71040791 + Lx8 LINE L1 7262 7331 -142 5 832 180 156 0 0 chr15 32455652 32455684 -71039290 - L3b LINE CR1 -329 153 122 5 832 186 71 0 0 chr15 32457049 32457077 -71037897 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 832 282 350 117 0 chr15 32457157 32457277 -71037697 - MLT1D LTR MaLR -17 488 355 5 832 207 0 0 0 chr15 32458710 32458733 -71036241 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 5 832 2031 150 10 52 chr15 32459387 32459773 -71035201 - Lx LINE L1 -11 6643 6274 5 832 732 12 0 0 chr15 32461115 32461200 -71033774 + (TG)n Simple_repeat Simple_repeat 2 86 0 5 832 753 285 110 25 chr15 32462368 32462731 -71032243 + MLT1C LTR MaLR 43 436 -31 5 832 594 60 0 0 chr15 32465826 32465909 -71029065 + (TCTCTG)n Simple_repeat Simple_repeat 6 88 0 5 832 342 0 0 0 chr15 32465909 32465947 -71029027 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 832 2400 74 6 3 chr15 32466071 32466395 -71028579 - L1_Mus2 LINE L1 0 6566 6242 6 832 900 76 0 0 chr15 32466395 32466513 -71028461 + L1_Mus2 LINE L1 6164 6281 -285 6 832 394 338 60 18 chr15 32466515 32466732 -71028242 - B4 SINE B4 -66 226 1 6 832 22 0 0 0 chr15 32470994 32471016 -71023958 + AT_rich Low_complexity Low_complexity 1 22 0 6 832 249 345 44 26 chr15 32471732 32471845 -71023129 + PB1 SINE Alu 13 127 0 6 832 405 307 116 11 chr15 32473660 32473841 -71021133 + MER2 DNA MER2_type 114 313 -32 6 832 1418 181 17 66 chr15 32477732 32478082 -71016892 - Lx9 LINE L1 -24 7620 7288 6 832 2796 146 47 43 chr15 32481102 32481661 -71013313 - RLTR31_Mm LTR ERVK 0 561 1 6 832 487 333 22 33 chr15 32481777 32481960 -71013014 - MER20 DNA MER1_type -38 181 1 6 832 234 223 78 0 chr15 32481981 32482084 -71012890 + (TCTA)n Simple_repeat Simple_repeat 3 113 0 6 832 197 284 43 86 chr15 32482449 32482588 -71012386 + L2c LINE L2 3119 3251 -175 6 832 347 318 309 40 chr15 32482785 32483034 -71011940 + MLT1A0 LTR MaLR 87 402 -6 6 832 213 318 128 18 chr15 32483059 32483168 -71011806 + L2c LINE L2 3263 3383 -4 6 832 405 131 0 0 chr15 32483247 32483331 -71011643 + (A)n Simple_repeat Simple_repeat 1 84 0 6 832 336 48 0 0 chr15 32485495 32485537 -71009437 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 832 205 274 0 0 chr15 32485647 32485709 -71009265 + A-rich Low_complexity Low_complexity 1 62 0 6 832 331 305 89 24 chr15 32486911 32487079 -71007895 - MIRb SINE MIR -16 252 74 6 832 213 319 0 14 chr15 32489269 32489339 -71005635 - B4 SINE B4 -222 70 2 6 832 192 77 0 0 chr15 32489373 32489399 -71005575 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 6 832 198 289 177 13 chr15 32489658 32489816 -71005158 - L3 LINE CR1 -3500 989 806 6 832 543 295 0 0 chr15 32489958 32490080 -71004894 - B3A SINE B2 -75 123 2 6 832 697 162 11 23 chr15 32491739 32491916 -71003058 - Lx LINE L1 -1 7643 7469 6 832 979 124 22 6 chr15 32493041 32493219 -71001755 - Lx LINE L1 -6 6648 6468 6 832 479 231 0 7 chr15 32493914 32494049 -71000925 + (TATG)n Simple_repeat Simple_repeat 1 134 0 6 832 605 319 53 18 chr15 32494068 32494349 -71000625 - B4A SINE B4 -1 291 1 6 832 1123 136 125 5 chr15 32494895 32495095 -70999879 - URR1A DNA MER1_type -2 224 1 6 832 262 314 12 0 chr15 32495298 32495384 -70999590 + GA-rich Low_complexity Low_complexity 2 88 0 6 832 748 251 73 0 chr15 32495605 32495796 -70999178 + B3 SINE B2 2 206 -10 6 832 23 0 0 0 chr15 32496069 32496092 -70998882 + AT_rich Low_complexity Low_complexity 1 23 0 6 832 802 247 21 47 chr15 32496100 32496291 -70998683 - B3A SINE B2 -9 189 4 6 832 411 288 14 53 chr15 32499219 32499360 -70995614 - MLT1A LTR MaLR -2 465 240 6 832 1929 146 15 58 chr15 32499360 32499702 -70995272 - ORR1A4 LTR MaLR 0 329 3 6 832 367 325 5 87 chr15 32499702 32499745 -70995229 - MLT1A LTR MaLR -135 332 296 6 832 202 204 0 0 chr15 32501254 32501298 -70993676 + T-rich Low_complexity Low_complexity 3 46 0 1 832 454 295 3 51 chr15 32502604 32502815 -70992159 + B3 SINE B2 1 196 -2 2 832 203 342 0 14 chr15 32503854 32503928 -70991046 + CT-rich Low_complexity Low_complexity 2 74 0 3 832 1062 188 109 34 chr15 32504953 32505218 -70989756 + RLTR20D LTR ERVK 1 285 -283 4 832 382 294 69 31 chr15 32505191 32505261 -70989713 + RLTR20D LTR ERVK 411 479 -99 4 832 486 0 0 0 chr15 32505261 32505315 -70989659 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 832 382 294 69 31 chr15 32505315 32505374 -70989600 + RLTR20D LTR ERVK 480 544 -34 4 833 255 271 14 0 chr15 32506095 32506165 -70988809 - L2a LINE L2 -96 3330 3260 6 833 501 151 0 25 chr15 32506564 32506686 -70988288 + CT-rich Low_complexity Low_complexity 3 121 0 7 833 366 338 39 114 chr15 32506992 32507326 -70987648 - MLT1A LTR MaLR -63 311 3 8 833 391 269 163 30 chr15 32507616 32507819 -70987155 + Tigger1 DNA MER2_type 2180 2409 -9 9 833 485 32 0 16 chr15 32508047 32508111 -70986863 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 833 23 33 0 0 chr15 32508401 32508431 -70986543 + AT_rich Low_complexity Low_complexity 1 30 0 1 833 282 167 12 37 chr15 32510092 32510173 -70984801 + GA-rich Low_complexity Low_complexity 4 82 0 1 833 251 169 15 30 chr15 32510513 32510580 -70984394 + RLTR42-int LTR ERVK 1330 1395 -4127 1 833 1322 243 63 47 chr15 32510742 32510960 -70984014 - ORR1D2 LTR MaLR 0 370 149 1 833 822 193 162 25 chr15 32510960 32511157 -70983817 + URR1B DNA MER1_type 1 224 -1 1 833 1322 243 63 47 chr15 32511157 32511300 -70983674 - ORR1D2 LTR MaLR -222 148 3 1 833 23 33 0 0 chr15 32511571 32511601 -70983373 + AT_rich Low_complexity Low_complexity 1 30 0 1 833 314 390 126 0 chr15 32512261 32512420 -70982554 + LTR16D LTR ERVL 25 203 -448 1 833 2148 148 0 0 chr15 32512421 32512759 -70982215 + ORR1A1 LTR MaLR 1 338 -8 1 833 588 29 0 0 chr15 32512993 32513063 -70981911 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 833 502 239 0 52 chr15 32513640 32513755 -70981219 - B1_Mus2 SINE Alu -37 110 2 2 833 910 78 48 0 chr15 32514845 32515012 -70979962 + (GGA)n Simple_repeat Simple_repeat 3 177 0 2 833 657 181 0 0 chr15 32515015 32515153 -70979821 + GA-rich Low_complexity Low_complexity 3 140 0 2 833 25 0 0 0 chr15 32516099 32516124 -70978850 + AT_rich Low_complexity Low_complexity 1 25 0 2 833 283 227 117 117 chr15 32516132 32516277 -70978697 + MLT1C LTR MaLR 17 161 -306 2 833 2040 281 158 16 chr15 32518854 32519704 -70975270 + RCHARR1 DNA MER1_type 5 974 0 2 833 189 121 0 0 chr15 32519826 32519859 -70975115 + (GA)n Simple_repeat Simple_repeat 1 33 0 2 833 1742 238 7 169 chr15 32520897 32521626 -70973348 - RMER19C LTR ERVK 0 611 1 2 833 729 308 45 11 chr15 32523011 32523280 -70971694 - B4 SINE B4 -13 279 2 2 833 420 20 0 0 chr15 32523285 32523334 -70971640 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 833 573 15 0 0 chr15 32523334 32523399 -70971575 + (TA)n Simple_repeat Simple_repeat 1 66 0 3 833 252 0 0 0 chr15 32523399 32523426 -70971548 + (GA)n Simple_repeat Simple_repeat 2 29 0 3 833 226 308 12 60 chr15 32523426 32523509 -70971465 + BC1_Mm scRNA scRNA 5 83 -69 3 833 259 214 44 77 chr15 32523512 32523603 -70971371 - L1MA9 LINE L1 -46 6266 6179 3 833 547 318 11 34 chr15 32524101 32524280 -70970694 - ORR1E LTR MaLR -164 195 21 3 833 202 209 0 0 chr15 32524458 32524501 -70970473 + (CAT)n Simple_repeat Simple_repeat 3 45 0 3 833 235 328 0 0 chr15 32526592 32526653 -70968321 - L2a LINE L2 -27 3399 3339 3 833 2982 43 38 0 chr15 32527615 32527988 -70966986 - L1_Mus1 LINE L1 0 6567 6181 3 833 23 0 0 0 chr15 32528021 32528044 -70966930 + AT_rich Low_complexity Low_complexity 1 23 0 3 833 453 292 107 33 chr15 32528383 32528627 -70966347 + B4 SINE B4 2 263 -29 3 833 507 101 0 0 chr15 32528664 32528743 -70966231 + (CA)n Simple_repeat Simple_repeat 2 80 0 4 833 230 136 23 0 chr15 32528765 32528809 -70966165 + CT-rich Low_complexity Low_complexity 1 45 0 4 833 568 349 58 17 chr15 32529347 32529641 -70965333 - MLT1B LTR MaLR -84 306 1 4 833 22 0 0 0 chr15 32529943 32529965 -70965009 + AT_rich Low_complexity Low_complexity 1 22 0 4 833 183 80 0 0 chr15 32530002 32530027 -70964947 + (TGG)n Simple_repeat Simple_repeat 1 25 0 4 833 2117 175 58 10 chr15 32530699 32531092 -70963882 - MTC LTR MaLR 0 421 10 4 833 306 0 0 0 chr15 32531099 32531133 -70963841 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 833 394 293 148 58 chr15 32531666 32531699 -70963275 - MLT2B3 LTR ERVL -289 265 1 4 833 917 234 67 43 chr15 32531699 32531909 -70963065 - MTEa LTR MaLR -164 215 1 4 833 336 102 0 0 chr15 32532149 32532198 -70962776 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 833 28 105 0 0 chr15 32532212 32532317 -70962657 + AT_rich Low_complexity Low_complexity 1 105 0 5 833 1716 259 65 117 chr15 32533336 32533403 -70961571 - RCHARR1 DNA MER1_type -1 973 909 5 833 198 0 0 0 chr15 32533403 32533425 -70961549 + (TA)n Simple_repeat Simple_repeat 1 22 0 5 833 1716 259 65 117 chr15 32533425 32533910 -70961064 - RCHARR1 DNA MER1_type -66 908 475 5 833 393 86 0 0 chr15 32533910 32533968 -70961006 + (CAATA)n Simple_repeat Simple_repeat 5 62 0 5 833 1716 259 65 117 chr15 32533968 32534313 -70960661 - RCHARR1 DNA MER1_type -500 474 123 5 833 342 0 0 0 chr15 32534423 32534461 -70960513 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 833 337 286 11 17 chr15 32534533 32534713 -70960261 - L1M2 LINE L1 -3909 2936 2761 5 833 311 345 61 53 chr15 32534876 32535139 -70959835 - L1MEf LINE L1 -4680 1520 1256 5 833 446 363 32 42 chr15 32535485 32535793 -70959181 + Lx8 LINE L1 7040 7344 -129 5 833 1421 70 0 31 chr15 32535799 32535992 -70958982 + B2_Mm2 SINE B2 1 187 -8 5 833 225 0 0 0 chr15 32537281 32537306 -70957668 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 5 833 236 30 30 0 chr15 32537462 32537495 -70957479 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 833 786 203 118 41 chr15 32538208 32538403 -70956571 + URR1A DNA MER1_type 17 226 0 6 833 209 312 38 25 chr15 32538743 32538822 -70956152 - MER5B DNA MER1_type 0 178 99 6 833 453 36 0 0 chr15 32539472 32539527 -70955447 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 833 422 143 13 0 chr15 32540264 32540341 -70954633 + T-rich Low_complexity Low_complexity 2 79 0 6 833 218 317 32 32 chr15 32541787 32541944 -70953030 - MIRm SINE MIR -88 188 25 6 833 588 196 256 6 chr15 32542054 32542234 -70952740 + URR1B DNA MER1_type 1 225 0 6 833 184 278 54 27 chr15 32544319 32544393 -70950581 - L2a LINE L2 -92 3334 3259 6 833 1174 164 8 60 chr15 32549744 32549978 -70944996 + URR1A DNA MER1_type 2 223 -3 6 833 410 53 18 0 chr15 32550689 32550746 -70944228 + (TAA)n Simple_repeat Simple_repeat 1 58 0 6 833 220 269 0 0 chr15 32550932 32550984 -70943990 - ID2 SINE ID -4 79 28 7 833 498 244 140 24 chr15 32551341 32551505 -70943469 + B3A SINE B2 1 183 -15 7 833 511 260 38 8 chr15 32551633 32551765 -70943209 - MLT1A1 LTR MaLR -13 395 260 7 833 290 204 124 41 chr15 32553555 32553652 -70941322 - MTEb LTR MaLR 0 379 275 7 833 471 35 0 0 chr15 32555120 32555177 -70939797 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 833 2271 126 3 3 chr15 32556987 32557338 -70937636 + L1_Mus4 LINE L1 6286 6636 0 7 833 271 287 10 21 chr15 32557614 32557710 -70937264 + CT-rich Low_complexity Low_complexity 3 97 0 7 833 768 168 39 98 chr15 32559928 32560133 -70934841 + B2_Mm2 SINE B2 1 193 -2 7 833 209 33 0 32 chr15 32561544 32561575 -70933399 + (TGGGGG)n Simple_repeat Simple_repeat 1 30 0 7 833 225 0 0 0 chr15 32561896 32561921 -70933053 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 833 1460 91 0 0 chr15 32562020 32562218 -70932756 + L1_Mus1 LINE L1 6370 6567 0 8 833 255 262 131 0 chr15 32563749 32563833 -70931141 - MLT1E1A LTR MaLR -581 99 5 8 833 688 323 69 44 chr15 32563943 32564260 -70930714 - MLT1E1A-int LTR MaLR -201 1288 964 8 833 492 346 147 29 chr15 32564345 32564604 -70930370 - MLT1E1A-int LTR MaLR -667 822 533 8 833 1512 230 50 29 chr15 32564604 32564980 -70929994 + ORR1C2 LTR MaLR 1 384 0 8 833 492 346 147 29 chr15 32564980 32565243 -70929731 - MLT1E1A-int LTR MaLR -957 532 239 8 833 1074 282 124 34 chr15 32565284 32566100 -70928874 - L1MB4 LINE L1 -2 6178 5290 8 833 279 328 58 58 chr15 32566109 32566297 -70928677 - MLT1E1A-int LTR MaLR -1295 194 7 8 833 251 333 210 31 chr15 32566319 32566610 -70928364 - MLT1E1A LTR MaLR -79 481 139 8 833 303 96 0 0 chr15 32567997 32568049 -70926925 + (TG)n Simple_repeat Simple_repeat 1 52 0 8 833 236 176 45 18 chr15 32568387 32568497 -70926477 + (TCTCTG)n Simple_repeat Simple_repeat 4 116 0 8 833 219 69 0 0 chr15 32569947 32569976 -70924998 + (CATTT)n Simple_repeat Simple_repeat 5 33 0 8 833 690 35 0 0 chr15 32572172 32572257 -70922717 + (TGGA)n Simple_repeat Simple_repeat 4 88 0 8 833 279 247 24 0 chr15 32572257 32572283 -70922691 + polypurine Low_complexity Low_complexity 3 28 0 8 833 995 107 11 17 chr15 32572283 32572463 -70922511 + (GGGAA)n Simple_repeat Simple_repeat 2 180 0 8 833 279 247 24 0 chr15 32572463 32572495 -70922479 + polypurine Low_complexity Low_complexity 29 62 0 9 833 360 43 0 0 chr15 32572495 32572541 -70922433 + (TGGA)n Simple_repeat Simple_repeat 1 46 0 9 833 279 247 24 0 chr15 32572541 32572566 -70922408 + polypurine Low_complexity Low_complexity 63 87 0 9 833 308 83 21 0 chr15 32572566 32572614 -70922360 + (GAAAA)n Simple_repeat Simple_repeat 3 51 0 9 833 240 143 0 0 chr15 32572639 32572681 -70922293 + (TGGA)n Simple_repeat Simple_repeat 1 42 0 9 833 495 0 0 0 chr15 32572702 32572757 -70922217 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 9 833 409 280 63 58 chr15 32573945 32574150 -70920824 - Lx8 LINE L1 -86 7387 7182 9 833 522 109 0 0 chr15 32574968 32575060 -70919914 + (TG)n Simple_repeat Simple_repeat 1 92 0 9 833 23 0 0 0 chr15 32575500 32575523 -70919451 + AT_rich Low_complexity Low_complexity 1 23 0 9 833 249 344 53 94 chr15 32576038 32576282 -70918692 + ORR1E LTR MaLR 69 302 -57 9 833 222 37 0 0 chr15 32579353 32579380 -70915594 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 833 482 294 140 38 chr15 32579613 32579878 -70915096 - Lx8 LINE L1 -18 7455 7164 1 833 648 160 0 0 chr15 32582898 32583017 -70911957 + (TG)n Simple_repeat Simple_repeat 1 119 0 1 833 251 218 12 37 chr15 32583241 32583322 -70911652 + A-rich Low_complexity Low_complexity 2 80 0 1 833 181 290 71 53 chr15 32583812 32583925 -70911049 - L3 LINE CR1 -867 3622 3508 1 833 189 74 0 0 chr15 32584694 32584721 -70910253 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 833 277 211 0 14 chr15 32584792 32584864 -70910110 + L1M5 LINE L1 3879 3949 -2197 1 833 2590 126 19 37 chr15 32584872 32585333 -70909641 + RLTR11B LTR ERVK 1 453 0 1 833 23 0 0 0 chr15 32586129 32586152 -70908822 + AT_rich Low_complexity Low_complexity 1 23 0 1 833 201 121 0 0 chr15 32586547 32586580 -70908394 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 833 892 266 35 90 chr15 32587128 32587504 -70907470 + ORR1E LTR MaLR 5 359 0 1 833 24 32 0 0 chr15 32587580 32587611 -70907363 + AT_rich Low_complexity Low_complexity 1 31 0 1 833 828 286 92 3 chr15 32587676 32587712 -70907262 - MER2 DNA MER2_type 0 345 310 1 833 432 0 0 0 chr15 32587712 32587760 -70907214 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 833 828 286 92 3 chr15 32587760 32588018 -70906956 - MER2 DNA MER2_type -36 309 27 1 833 800 145 74 13 chr15 32591926 32592088 -70902886 - ORR1B1 LTR MaLR -208 162 1 1 833 566 296 82 11 chr15 32592277 32592547 -70902427 - L1M2 LINE L1 -1843 4300 4012 1 833 204 143 0 0 chr15 32593506 32593548 -70901426 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 1 833 701 344 118 41 chr15 32593920 32594818 -70900156 - L1MEc LINE L1 -5383 1017 51 1 833 325 273 113 57 chr15 32597117 32597276 -70897698 + MER68 LTR ERVL 1 168 -395 1 833 404 314 86 29 chr15 32597288 32597476 -70897498 + HAL1 LINE L1 1119 1319 -1188 1 833 270 0 0 0 chr15 32597476 32597506 -70897468 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 1 833 404 314 86 29 chr15 32597506 32597527 -70897447 + HAL1 LINE L1 1320 1340 -1167 1 833 970 285 18 7 chr15 32598009 32598281 -70896693 - Lx8 LINE L1 -150 7323 7049 1 833 323 275 82 29 chr15 32600142 32600438 -70894536 - RMER17C LTR ERVK -520 386 4 1 833 283 284 11 0 chr15 32601084 32601179 -70893795 - MER53 DNA hAT -96 97 2 1 833 2883 65 27 0 chr15 32601265 32601637 -70893337 + L1_Mus2 LINE L1 6185 6566 0 1 833 27 62 0 0 chr15 32601812 32601860 -70893114 + AT_rich Low_complexity Low_complexity 1 48 0 1 833 238 192 24 71 chr15 32602194 32602278 -70892696 + (TTGGGG)n Simple_repeat Simple_repeat 1 80 0 1 833 2250 192 24 10 chr15 32603669 32604084 -70890890 - MTC LTR MaLR 0 421 1 1 833 220 212 12 24 chr15 32604457 32604539 -70890435 + (TGGA)n Simple_repeat Simple_repeat 1 81 0 1 833 266 183 106 11 chr15 32604613 32604707 -70890267 - Lx9 LINE L1 -8 7636 7534 1 833 3866 247 70 45 chr15 32604718 32606278 -70888696 - Lx9 LINE L1 -162 7482 5788 1 833 641 316 71 10 chr15 32607100 32607298 -70887676 + B4A SINE B4 24 233 -59 1 833 26 50 0 0 chr15 32608236 32608276 -70886698 + AT_rich Low_complexity Low_complexity 1 40 0 1 833 3004 76 30 5 chr15 32609649 32610045 -70884929 - MTB_Mm LTR MaLR 0 407 2 1 833 465 129 0 0 chr15 32613465 32613558 -70881416 + (TC)n Simple_repeat Simple_repeat 1 93 0 1 833 210 220 0 0 chr15 32613564 32613623 -70881351 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 833 194 105 26 0 chr15 32615442 32615480 -70879494 + (GA)n Simple_repeat Simple_repeat 1 39 0 1 833 710 209 36 7 chr15 32615550 32615690 -70879284 + B1_Mur4 SINE Alu 1 144 -6 1 833 454 77 13 13 chr15 32615691 32615714 -70879260 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 833 417 39 0 0 chr15 32615714 32615765 -70879209 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 833 454 77 13 13 chr15 32615765 32615820 -70879154 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 833 240 239 70 0 chr15 32617078 32617149 -70877825 + MIRb SINE MIR 123 198 -70 1 833 644 323 108 8 chr15 32617426 32617779 -70877195 + Lx8 LINE L1 7026 7413 -60 1 833 244 315 101 62 chr15 32618400 32618627 -70876347 + Lx8 LINE L1 7203 7438 -35 1 833 452 105 13 0 chr15 32621599 32621675 -70873299 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 833 270 320 0 0 chr15 32621682 32621760 -70873214 + CT-rich Low_complexity Low_complexity 3 80 0 1 833 345 222 17 25 chr15 32626539 32626659 -70868315 + (TA)n Simple_repeat Simple_repeat 2 120 0 1 833 282 56 0 0 chr15 32626906 32626942 -70868032 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 833 303 93 0 0 chr15 32627989 32628032 -70866942 + (A)n Simple_repeat Simple_repeat 1 43 0 1 833 184 30 0 57 chr15 32628486 32628521 -70866453 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1 833 1313 273 70 30 chr15 32628711 32629209 -70865765 + Lx9 LINE L1 6956 7473 -171 1 833 802 322 67 27 chr15 32629922 32630867 -70864107 - Lx8 LINE L1 -1558 5915 4921 1 833 452 246 94 0 chr15 32631356 32631494 -70863480 + Lx8 LINE L1 6393 6543 -930 1 833 611 361 114 12 chr15 32631541 32631971 -70863003 + Lx8 LINE L1 6677 7157 -316 1 833 3039 67 15 5 chr15 32631971 32632363 -70862611 + MTA_Mm LTR MaLR 1 396 0 1 833 375 374 42 26 chr15 32632363 32632440 -70862534 + Lx8 LINE L1 7158 7229 -244 1 833 15711 98 10 3 chr15 32632634 32636084 -70858890 + L1VL1 LINE L1 240 3714 -2169 1 833 3711 64 9 0 chr15 32636085 32636552 -70858422 + L1_Mus1 LINE L1 6097 6567 0 1 833 294 329 89 20 chr15 32636700 32636846 -70858128 + MLT1A0 LTR MaLR 204 359 -6 1 834 3441 49 96 0 chr15 32638884 32639331 -70855643 + L1Md_F2 LINE L1 6079 6568 -14 1 834 735 12 0 0 chr15 32639572 32639656 -70855318 + (TC)n Simple_repeat Simple_repeat 1 84 0 1 834 438 20 0 0 chr15 32639656 32639706 -70855268 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 834 30461 81 1 1 chr15 32639853 32645043 -70849931 + L1Md_F2 LINE L1 394 5585 -298 1 834 7268 75 21 5 chr15 32645044 32646024 -70848950 + L1Md_F2 LINE L1 5587 6582 0 1 834 1007 238 67 124 chr15 32646376 32646764 -70848210 + MTE2a LTR MaLR 13 378 -1 1 834 495 220 27 18 chr15 32646941 32647052 -70847922 - B3A SINE B2 -86 112 1 1 834 1220 285 71 22 chr15 32647166 32647705 -70847269 + L1ME1 LINE L1 5325 5894 -285 1 834 231 36 0 0 chr15 32647705 32647733 -70847241 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 1 834 1220 285 71 22 chr15 32647733 32647839 -70847135 + L1ME1 LINE L1 5895 6002 -177 1 834 216 294 106 0 chr15 32648018 32648103 -70846871 + PB1D9 SINE Alu 5 98 -22 1 834 466 138 70 0 chr15 32648147 32648250 -70846724 + Lx2 LINE L1 6369 6475 -522 1 834 511 171 8 33 chr15 32648256 32648377 -70846597 + Lx2 LINE L1 6880 6997 0 1 834 1038 258 30 19 chr15 32648413 32648678 -70846296 + RMER1B Other Other 2 269 -797 1 834 423 0 0 0 chr15 32648694 32648741 -70846233 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 834 895 253 112 39 chr15 32648779 32649190 -70845784 + Lx9 LINE L1 7198 7638 -6 1 834 189 0 0 0 chr15 32649343 32649364 -70845610 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1 834 329 222 28 0 chr15 32649538 32649610 -70845364 + ID4_ SINE ID 4 77 -6 1 834 216 158 0 0 chr15 32649610 32649648 -70845326 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 834 825 87 0 0 chr15 32649652 32649767 -70845207 + (GGAA)n Simple_repeat Simple_repeat 1 115 0 1 834 3267 50 12 2 chr15 32651769 32652173 -70842801 - L1_Mus1 LINE L1 -1 6566 6159 1 834 1189 204 40 0 chr15 32653101 32653327 -70841647 + MTC LTR MaLR 92 326 -95 1 834 7304 211 63 31 chr15 32653337 32655140 -70839834 + MERVL_2A-int LTR ERVL 3899 5758 -3 1 834 934 138 54 27 chr15 32655142 32655328 -70839646 - B2_Mm2 SINE B2 -3 192 2 1 834 1105 211 29 195 chr15 32655330 32655799 -70839175 + MT2A LTR ERVL 3 584 0 1 834 413 284 60 7 chr15 32655799 32655948 -70839026 + MER2 DNA MER2_type 93 249 -96 1 834 249 180 78 47 chr15 32658066 32658130 -70836844 + MLT1A1 LTR MaLR 306 371 -37 1 834 458 159 0 11 chr15 32658161 32658250 -70836724 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 1 834 270 0 0 0 chr15 32658250 32658280 -70836694 + (CAAT)n Simple_repeat Simple_repeat 1 30 0 1 834 425 300 123 45 chr15 32658632 32658901 -70836073 + B4A SINE B4 1 290 -2 1 834 486 362 65 12 chr15 32659638 32659962 -70835012 + MLT1D LTR MaLR 163 503 -2 1 834 1253 231 20 11 chr15 32660166 32660494 -70834480 + MTD LTR MaLR 1 419 0 1 834 375 222 74 0 chr15 32660495 32660576 -70834398 - MER54A LTR ERVL -138 763 677 1 834 333 330 40 48 chr15 32660858 32661109 -70833865 - MER54A LTR ERVL -647 254 6 1 834 246 317 55 46 chr15 32662780 32662889 -70832085 + LTR33 LTR ERVL 156 265 -250 1 834 423 0 0 0 chr15 32662975 32663022 -70831952 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 834 498 269 92 0 chr15 32663153 32663283 -70831691 - B4A SINE B4 -18 274 133 1 834 387 0 0 0 chr15 32663301 32663344 -70831630 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1 834 255 188 62 0 chr15 32664490 32664554 -70830420 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 1 834 1301 50 0 0 chr15 32664796 32664955 -70830019 + B2_Mm1t SINE B2 2 160 -33 1 834 306 0 0 0 chr15 32664955 32664989 -70829985 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1 834 354 104 0 0 chr15 32665039 32665087 -70829887 + B2_Mm1t SINE B2 113 160 -33 1 834 444 37 0 0 chr15 32665087 32665141 -70829833 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 1 834 703 338 14 23 chr15 32665459 32665677 -70829297 + B4A SINE B4 1 216 -76 1 834 375 23 0 0 chr15 32666806 32666850 -70828124 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 834 230 282 63 13 chr15 32666865 32666944 -70828030 - B4A SINE B4 -25 267 185 1 834 539 219 301 40 chr15 32667338 32667514 -70827460 + URR1A DNA MER1_type 1 222 -4 1 834 560 263 1 41 chr15 32667948 32668097 -70826877 + B1_Mur1 SINE Alu 1 143 -6 1 834 797 238 70 48 chr15 32669656 32669886 -70825088 - B4A SINE B4 -56 236 2 2 834 2254 186 30 10 chr15 32670106 32670507 -70824467 - MTC LTR MaLR -4 417 9 2 834 2163 162 116 19 chr15 32671422 32671887 -70823087 + L1Md_F2 LINE L1 307 816 -5800 2 834 15712 83 3 0 chr15 32671874 32674386 -70820588 + L1Md_F2 LINE L1 977 3496 -2387 2 834 6940 67 2 3 chr15 32674370 32675326 -70819648 + L1Md_F2 LINE L1 4631 5585 -298 2 834 7419 70 5 7 chr15 32675327 32676325 -70818649 + L1Md_F2 LINE L1 5587 6582 0 2 834 374 210 8 0 chr15 32676888 32677012 -70817962 + CT-rich Low_complexity Low_complexity 2 126 0 2 834 2798 63 8 3 chr15 32677625 32677993 -70816981 + L1_Mus3 LINE L1 6257 6626 -12 2 834 533 206 0 0 chr15 32678002 32678158 -70816816 - RMER1A Other Other -784 246 33 2 834 2199 145 193 17 chr15 32678840 32679317 -70815657 + RLTR31_Mm LTR ERVK 1 561 0 2 834 681 53 0 0 chr15 32679414 32679508 -70815466 + (TC)n Simple_repeat Simple_repeat 2 95 0 2 834 21 57 0 0 chr15 32680195 32680230 -70814744 + AT_rich Low_complexity Low_complexity 1 35 0 2 834 447 19 0 0 chr15 32681103 32681155 -70813819 + (GTGTG)n Simple_repeat Simple_repeat 1 52 0 2 834 980 271 34 19 chr15 32682063 32682326 -70812648 + Lx5 LINE L1 6775 7041 -9 2 834 523 321 84 8 chr15 32682920 32683173 -70811801 - Lx7 LINE L1 -1787 5909 5616 2 834 1752 179 52 62 chr15 32683173 32683542 -70811432 - ORR1B2 LTR MaLR 0 367 3 2 834 523 316 91 9 chr15 32683542 32683658 -70811316 - Lx7 LINE L1 -232 5615 5482 2 834 1559 289 121 54 chr15 32684111 32684982 -70809992 - Lx9 LINE L1 -15 7629 6685 2 834 2490 189 33 17 chr15 32684982 32685500 -70809474 + RLTR11A LTR ERVK 1 526 -2 2 834 1559 289 121 54 chr15 32685500 32685611 -70809363 - Lx9 LINE L1 -960 6684 6581 2 834 964 255 18 51 chr15 32685607 32685673 -70809301 + Lx9 LINE L1 5468 5530 -317 2 834 189 0 0 0 chr15 32685673 32685694 -70809280 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2 834 964 267 21 46 chr15 32685694 32686104 -70808870 + Lx9 LINE L1 5531 5966 -1678 2 834 303 28 0 0 chr15 32686524 32686560 -70808414 + (TC)n Simple_repeat Simple_repeat 2 37 0 2 834 399 56 0 0 chr15 32686560 32686613 -70808361 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 834 259 156 0 0 chr15 32688525 32688570 -70806404 + L1MA6 LINE L1 5871 5915 -376 2 834 314 271 138 25 chr15 32688594 32688870 -70806104 + L1MA6 LINE L1 5994 6300 0 2 834 419 314 68 30 chr15 32689163 32689429 -70805545 - L1ME3B LINE L1 -294 5946 5671 2 834 4826 165 95 67 chr15 32690044 32690933 -70804041 + RLTR25A LTR ERVK 1 863 -240 2 834 1282 27 0 0 chr15 32690933 32691080 -70803894 - B1_Mus1 SINE Alu 0 148 2 2 834 4826 165 95 67 chr15 32691080 32691263 -70803711 + RLTR25A LTR ERVK 864 1102 -1 2 834 773 199 11 16 chr15 32692888 32693072 -70801902 - MYSERV-int LTR ERVK 0 6550 6368 2 834 864 227 27 14 chr15 32693474 32693693 -70801281 - MYSERV6-int LTR ERVK -256 8703 8482 2 834 542 94 24 0 chr15 32693713 32693798 -70801176 + (GAAA)n Simple_repeat Simple_repeat 2 88 0 2 834 184 227 45 0 chr15 32694353 32694397 -70800577 - L3 LINE CR1 -3714 775 730 2 834 24 77 0 0 chr15 32694852 32694904 -70800070 + AT_rich Low_complexity Low_complexity 1 52 0 2 834 964 313 85 12 chr15 32695009 32695339 -70799635 - MTEa LTR MaLR -25 354 1 2 834 322 333 103 6 chr15 32695391 32695566 -70799408 - Charlie1 DNA MER1_type -839 1942 1751 2 834 239 269 103 0 chr15 32695774 32695852 -70799122 - Charlie1 DNA MER1_type -1328 1453 1368 2 834 277 217 17 0 chr15 32696382 32696427 -70798547 + ORR1C1 LTR MaLR 149 194 -185 2 834 252 0 0 0 chr15 32696427 32696455 -70798519 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 2 834 277 209 14 29 chr15 32696455 32696478 -70798496 + ORR1C1 LTR MaLR 195 215 -164 2 834 378 277 0 0 chr15 32696496 32696626 -70798348 + C-rich Low_complexity Low_complexity 1 130 0 2 834 293 296 49 0 chr15 32696667 32696748 -70798226 + B1F1 SINE Alu 14 98 -51 2 834 226 306 211 9 chr15 32697783 32697892 -70797082 + MIRb SINE MIR 15 145 -123 2 834 417 237 22 29 chr15 32698353 32698492 -70796482 + L1VL1 LINE L1 2 276 -6142 2 834 17145 117 6 20 chr15 32698587 32701935 -70793039 + L1Md_F LINE L1 668 3960 -1923 2 834 2350 88 31 55 chr15 32701930 32702151 -70792823 - MusHAL1 LINE L1 -786 1926 1708 2 834 1108 75 0 27 chr15 32702151 32702301 -70792673 - B1_Mus2 SINE Alu 0 147 2 2 834 2350 88 31 55 chr15 32702301 32702501 -70792473 - MusHAL1 LINE L1 -1005 1707 1515 2 834 360 76 59 29 chr15 32702485 32702553 -70792421 - MusHAL1 LINE L1 -1477 1235 1166 2 834 1153 177 37 23 chr15 32702553 32702767 -70792207 + ORR1C1 LTR MaLR 162 378 0 2 834 1436 284 86 45 chr15 32702772 32702845 -70792129 + L1MC1 LINE L1 5459 5532 -801 2 834 3800 103 172 30 chr15 32702845 32703503 -70791471 + RMER17A LTR ERVK 1 751 0 2 834 1436 284 86 45 chr15 32703503 32704164 -70790810 + L1MC1 LINE L1 5533 6228 -105 2 834 1406 218 72 64 chr15 32704164 32704541 -70790433 + ORR1C2 LTR MaLR 3 382 -2 2 834 1436 284 86 45 chr15 32704541 32704635 -70790339 + L1MC1 LINE L1 6229 6322 -11 2 834 490 230 141 0 chr15 32705327 32705462 -70789512 - MER82 DNA MER2_type -430 223 70 2 834 1396 71 16 5 chr15 32705491 32705675 -70789299 - B2_Mm2 SINE B2 -8 187 2 2 834 788 238 38 24 chr15 32706246 32706457 -70788517 + B3 SINE B2 1 214 -2 2 834 565 312 32 7 chr15 32706554 32706709 -70788265 - RSINE1 SINE B4 -4 161 3 2 834 234 152 0 0 chr15 32707223 32707282 -70787692 + (TCTG)n Simple_repeat Simple_repeat 4 62 0 2 834 654 13 0 0 chr15 32707743 32707818 -70787156 + (TC)n Simple_repeat Simple_repeat 2 76 0 2 834 249 33 0 0 chr15 32707818 32707847 -70787127 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 834 252 341 0 32 chr15 32708245 32708339 -70786635 + GA-rich Low_complexity Low_complexity 3 93 0 2 834 2216 120 32 44 chr15 32713728 32714137 -70780837 - IAPLTR2a LTR ERVK -7 404 1 2 834 5649 50 5 12 chr15 32714137 32714888 -70780086 - IAPEz-int LTR ERVK 0 6481 5736 2 834 2102 68 0 0 chr15 32714887 32715165 -70779809 - IAPEz-int LTR ERVK -4845 1636 1359 2 834 3576 50 26 18 chr15 32715165 32715656 -70779318 - IAPEz-int LTR ERVK -5819 662 168 2 834 237 321 0 0 chr15 32715656 32715709 -70779265 - RLTR27 LTR ERVK -34 275 223 2 834 238 309 0 0 chr15 32715737 32715792 -70779182 - RLTR27 LTR ERVK -34 275 221 2 834 828 137 14 142 chr15 32715792 32716004 -70778970 - IAPEz-int LTR ERVK -6288 193 9 2 834 2452 99 153 0 chr15 32716005 32716417 -70778557 - IAPLTR2_Mm LTR ERVK 0 475 1 2 834 741 158 20 0 chr15 32716776 32716922 -70778052 + L1_Mus3 LINE L1 6484 6632 -6 2 834 432 147 0 0 chr15 32716929 32717004 -70777970 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 2 834 244 283 161 12 chr15 32717111 32717279 -70777695 + L1ME4a LINE L1 5880 6072 -52 2 834 423 0 0 0 chr15 32718146 32718193 -70776781 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 834 1944 140 32 0 chr15 32718265 32718579 -70776395 - ORR1A2 LTR MaLR -3 324 1 2 834 201 227 0 0 chr15 32719329 32719373 -70775601 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 834 361 255 108 0 chr15 32719974 32720076 -70774898 + PB1D10 SINE Alu 5 117 0 2 834 189 0 0 0 chr15 32720131 32720152 -70774822 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 834 342 262 37 37 chr15 32720415 32720522 -70774452 + PB1D7 SINE Alu 5 111 -9 2 834 21 0 0 0 chr15 32720617 32720638 -70774336 + AT_rich Low_complexity Low_complexity 1 21 0 2 834 8337 42 2 0 chr15 32721755 32723181 -70771793 - L1Md_F2 LINE L1 -10 6572 5145 2 834 21 0 0 0 chr15 32723377 32723398 -70771576 + AT_rich Low_complexity Low_complexity 1 21 0 2 834 273 29 0 0 chr15 32723426 32723460 -70771514 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 834 261 219 0 0 chr15 32723460 32723533 -70771441 + G-rich Low_complexity Low_complexity 1 73 0 2 834 294 50 0 0 chr15 32723643 32723683 -70771291 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 834 355 326 50 79 chr15 32723743 32723883 -70771091 + B3A SINE B2 1 136 -62 2 834 387 302 23 23 chr15 32723994 32724123 -70770851 - RMER10B LTR ERVL 0 398 270 2 834 180 200 0 0 chr15 32724683 32724723 -70770251 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 834 869 195 118 31 chr15 32725156 32725384 -70769590 + RLTR13D2 LTR ERVK 1 248 -558 2 834 3337 98 36 8 chr15 32725362 32725864 -70769110 + RLTR13D2 LTR ERVK 508 1023 0 2 834 426 20 0 0 chr15 32726032 32726083 -70768891 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 834 210 171 0 0 chr15 32726085 32726126 -70768848 + (CATATA)n Simple_repeat Simple_repeat 6 46 0 2 834 1168 198 89 16 chr15 32726152 32726409 -70768565 - RMER15 LTR ERVL -5 570 295 2 834 2450 80 3 6 chr15 32727453 32727780 -70767194 - IAPEY2_LTR LTR ERVK 0 357 32 2 834 609 332 64 45 chr15 32728179 32728876 -70766098 + RLTR6-int LTR ERV1 1041 1695 -6083 2 834 711 251 161 18 chr15 32728975 32729255 -70765719 + L1VL2 LINE L1 97 416 -5919 2 834 1302 124 0 38 chr15 32729264 32729474 -70765500 - L1VL2 LINE L1 -5720 615 414 2 834 6904 106 14 45 chr15 32729474 32730647 -70764327 + MusHAL1 LINE L1 406 1542 -1170 2 834 37861 30 1 7 chr15 32730649 32735824 -70759150 + L1Md_T LINE L1 452 5586 -297 2 834 8734 45 1 0 chr15 32735824 32736818 -70758156 + L1Md_T LINE L1 5587 6581 -1 2 834 18999 137 27 2 chr15 32736819 32737195 -70757779 + L1_Mus3 LINE L1 2734 3131 -2752 2 834 248 70 23 0 chr15 32737195 32737238 -70757736 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 2 834 18999 129 24 3 chr15 32737238 32740674 -70754300 + L1_Mus3 LINE L1 3132 6631 -7 2 834 1548 217 38 6 chr15 32741185 32741501 -70753473 - RMER15 LTR ERVL -249 326 1 2 834 214 307 114 30 chr15 32741611 32741742 -70753232 - L2 LINE L2 -547 2872 2731 2 834 219 364 0 11 chr15 32741753 32741842 -70753132 + PB1D10 SINE Alu 1 88 -29 2 834 936 0 0 0 chr15 32741846 32741950 -70753024 + (GA)n Simple_repeat Simple_repeat 1 104 0 2 834 615 212 58 112 chr15 32742030 32742329 -70752645 - MT2A LTR ERVL -62 539 326 2 834 333 272 29 10 chr15 32742387 32742491 -70752483 - MT2A LTR ERVL -403 130 25 2 834 2319 168 47 22 chr15 32742491 32742963 -70752011 - MERVL_2A-int LTR ERVL -3 5758 5226 2 834 217 27 53 26 chr15 32743594 32743632 -70751342 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 834 1460 144 90 4 chr15 32743635 32743879 -70751095 - Lx LINE L1 -2 6652 6388 2 834 829 237 53 62 chr15 32743879 32744236 -70750738 - RLTR10D LTR ERVK 0 411 1 2 834 1525 124 0 9 chr15 32744236 32744464 -70750510 - IAP-d-int LTR ERVK 0 6542 6317 2 834 5408 299 24 16 chr15 32744741 32746702 -70748272 - IAP-d-int LTR ERVK -1398 5144 3170 2 834 314 230 14 0 chr15 32746728 32746802 -70748172 - IAP-d-int LTR ERVK -6401 141 67 2 834 544 196 18 0 chr15 32746798 32746910 -70748064 - IAP-d-int LTR ERVK -6407 135 22 2 834 681 291 53 48 chr15 32746957 32747314 -70747660 - RLTR10D LTR ERVK 0 359 1 2 834 7364 150 14 1 chr15 32747315 32749108 -70745866 - Lx2 LINE L1 -257 6740 4924 2 834 14801 115 128 18 chr15 32749114 32752451 -70742523 + L1Md_F2 LINE L1 575 4746 -1140 2 834 232 167 46 77 chr15 32752451 32752516 -70742458 - RMER20A LTR ERVK -268 248 186 2 834 14801 115 128 18 chr15 32752516 32753189 -70741785 + L1Md_F2 LINE L1 4747 5589 -297 2 834 8897 33 2 1 chr15 32753189 32754184 -70740790 + L1Md_T LINE L1 5587 6582 0 2 834 17815 71 7 0 chr15 32754184 32756146 -70738828 + L1Md_F2 LINE L1 3271 5234 -649 2 834 612 0 0 0 chr15 32756146 32756214 -70738760 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 834 17815 71 7 0 chr15 32756214 32756550 -70738424 + L1Md_F2 LINE L1 5235 5584 -299 2 834 8312 48 15 0 chr15 32756550 32757521 -70737453 + L1Md_F2 LINE L1 5587 6572 -10 2 834 15205 169 30 25 chr15 32757544 32760600 -70734374 - Lx2 LINE L1 -949 4937 1867 2 834 5578 158 72 41 chr15 32760594 32761681 -70733293 + Lx2A1 LINE L1 5889 7008 0 2 834 279 317 62 45 chr15 32761965 32762319 -70732655 + L1_Mur3 LINE L1 1444 1803 -4077 2 104 36176 36 0 0 chr15 32762734 32768373 -70726601 + L1Md_T LINE L1 1 5589 -297 2 835 9613 4 0 0 chr15 32768373 32769369 -70725605 + L1Md_T LINE L1 5590 6585 0 2 835 241 335 56 70 chr15 32770037 32770196 -70724778 + MIR SINE MIR 14 169 -93 2 835 41747 12 0 6 chr15 32770628 32777027 -70717947 - L1Md_A LINE L1 -1 6581 226 2 835 282 287 121 55 chr15 32777278 32777482 -70717492 + MIR SINE MIR 5 228 -40 3 835 222 298 34 56 chr15 32777548 32777637 -70717337 - B1_Mus1 SINE Alu -54 94 8 3 835 306 279 0 0 chr15 32777575 32777643 -70717331 - ID_B1 SINE B4 -78 146 79 3 835 34 24 0 0 chr15 32778662 32778703 -70716271 + AT_rich Low_complexity Low_complexity 1 41 0 3 835 414 0 0 0 chr15 32778994 32779040 -70715934 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 835 4976 137 38 3 chr15 32779478 32780237 -70714737 - Lx LINE L1 -5 6649 5864 3 835 448 307 20 10 chr15 32780443 32780545 -70714429 + RSINE1 SINE B4 48 150 -15 3 835 426 239 15 10 chr15 32782228 32782341 -70712633 - PB1D10 SINE Alu -1 116 5 3 835 246 62 0 0 chr15 32782890 32782922 -70712052 + (TCCA)n Simple_repeat Simple_repeat 4 35 0 3 835 1745 197 185 23 chr15 32782957 32783394 -70711580 + RMER19B LTR ERVK 357 864 -38 3 835 1106 120 12 0 chr15 32783408 32783575 -70711399 + L1_Mus1 LINE L1 2096 2264 -3619 3 835 10006 118 6 4 chr15 32783573 32783898 -70711076 + L1_Mus1 LINE L1 4413 4737 -1146 3 835 369 0 0 0 chr15 32783898 32783939 -70711035 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 3 835 10006 91 8 2 chr15 32783939 32785764 -70709210 + L1_Mus1 LINE L1 4738 6653 -1 3 835 306 50 0 0 chr15 32785804 32785844 -70709130 + (CATA)n Simple_repeat Simple_repeat 3 42 0 3 835 810 293 119 10 chr15 32785982 32786503 -70708471 + Lx7 LINE L1 5479 6068 -1628 3 835 35989 46 0 3 chr15 32786498 32791790 -70703184 + L1Md_T LINE L1 220 5589 -297 3 835 8781 44 0 0 chr15 32791790 32792784 -70702190 + L1Md_T LINE L1 5590 6583 -2 3 835 2829 320 76 25 chr15 32792802 32794076 -70700898 + Lx7 LINE L1 6076 7414 -282 3 835 308 179 0 13 chr15 32794078 32794157 -70700817 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 3 835 25 31 0 0 chr15 32794226 32794258 -70700716 + AT_rich Low_complexity Low_complexity 1 32 0 3 835 362 213 65 0 chr15 32794269 32794377 -70700597 - L1_Mur3 LINE L1 -4375 1505 1391 3 835 430 184 0 76 chr15 32794381 32794499 -70700475 - Lx LINE L1 -4 6650 6542 3 835 32535 27 1 0 chr15 32794895 32799379 -70695595 - L1Md_A LINE L1 0 6582 2093 3 835 2367 111 212 27 chr15 32799489 32799970 -70695004 + RLTR6_Mm LTR ERV1 37 606 -48 3 835 64262 25 15 3 chr15 32799973 32807495 -70687479 + RLTR6-int LTR ERV1 25 7778 0 3 835 2267 107 221 28 chr15 32807604 32808066 -70686908 + RLTR6_Mm LTR ERV1 37 587 -67 3 835 6519 114 9 43 chr15 32808067 32810105 -70684869 - L1Md_F LINE L1 -3792 2091 124 3 835 862 313 11 40 chr15 32810119 32810392 -70684582 - B4A SINE B4 -24 268 4 3 835 306 0 0 0 chr15 32810397 32810431 -70684543 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 835 273 125 0 0 chr15 32810557 32810597 -70684377 - B2_Mm2 SINE B2 -154 41 2 3 835 212 235 0 14 chr15 32810639 32810708 -70684266 + GA-rich Low_complexity Low_complexity 3 70 0 3 835 24 53 0 0 chr15 32810834 32810872 -70684102 + AT_rich Low_complexity Low_complexity 1 38 0 3 835 1741 168 109 26 chr15 32812408 32812605 -70682369 + RMER10B LTR ERVL 19 211 -187 3 835 1196 85 0 17 chr15 32812605 32812785 -70682189 + (TTCTCC)n Simple_repeat Simple_repeat 3 179 0 3 835 1741 168 109 26 chr15 32812785 32812936 -70682038 + RMER10B LTR ERVL 212 396 -2 3 835 636 305 0 0 chr15 32813179 32813310 -70681664 - RSINE1 SINE B4 -29 136 6 3 835 327 310 34 134 chr15 32813290 32813439 -70681535 + B4A SINE B4 158 291 -1 3 835 349 250 45 18 chr15 32813672 32813782 -70681192 + MLT1D LTR MaLR 392 504 -1 3 835 289 313 17 9 chr15 32813927 32814043 -70680931 + MIR SINE MIR 124 240 -22 3 835 435 247 43 55 chr15 32814475 32814638 -70680336 - RNLTR23 LTR ERVK 0 642 482 3 835 195 230 23 11 chr15 32815299 32815387 -70679587 + GA-rich Low_complexity Low_complexity 1 89 0 3 835 645 269 80 23 chr15 32816596 32816771 -70678203 + B3A SINE B2 1 185 -13 3 835 9555 87 22 20 chr15 32816817 32818903 -70676071 - L1Md_F2 LINE L1 0 6582 4485 3 835 831 297 33 36 chr15 32819892 32820168 -70674806 + B4A SINE B4 5 279 -13 3 835 21 0 0 0 chr15 32820470 32820491 -70674483 + AT_rich Low_complexity Low_complexity 1 21 0 3 835 316 295 56 27 chr15 32821228 32821411 -70673563 - MLT1A0 LTR MaLR -129 236 1 3 835 708 250 0 39 chr15 32821490 32821644 -70673330 + B1_Mur4 SINE Alu 2 149 -1 3 835 819 256 236 2 chr15 32821672 32822083 -70672891 + L1MD LINE L1 5270 5776 -2219 3 835 1156 271 105 6 chr15 32823662 32823985 -70670989 + Lx6 LINE L1 7102 7456 -4 3 835 512 273 151 13 chr15 32824278 32824430 -70670544 + ID_B1 SINE B4 3 175 -49 3 835 11272 175 31 14 chr15 32824435 32825218 -70669756 + Lx5 LINE L1 1251 2054 -3823 3 835 438 65 0 0 chr15 32825218 32825280 -70669694 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 835 11272 180 49 14 chr15 32825280 32826978 -70667996 + Lx5 LINE L1 2050 4318 -1568 3 835 225 0 0 0 chr15 32826978 32827003 -70667971 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 3 835 10376 219 214 15 chr15 32827003 32827823 -70667151 + Lx5 LINE L1 4319 5207 -679 3 835 950 263 45 44 chr15 32827848 32828220 -70666754 + RLTR26 LTR ERVK 21 417 -225 3 835 3522 239 48 47 chr15 32828468 32830354 -70664620 + Lx5 LINE L1 5195 7029 -29 3 835 189 0 0 0 chr15 32830371 32830392 -70664582 + (ATG)n Simple_repeat Simple_repeat 2 22 0 3 835 25071 71 24 0 chr15 32830529 32835514 -70659460 + L1Md_F2 LINE L1 503 5585 -298 3 835 7812 52 19 0 chr15 32835515 32836491 -70658483 + L1Md_F2 LINE L1 5587 6581 -1 3 835 219 167 0 0 chr15 32837302 32837344 -70657630 + (CCA)n Simple_repeat Simple_repeat 3 44 0 3 835 298 293 25 62 chr15 32837344 32837424 -70657550 - ID4_ SINE ID -4 79 3 3 835 355 224 121 10 chr15 32837434 32837533 -70657441 - B1F SINE Alu -7 142 33 3 835 3137 58 5 0 chr15 32837973 32838366 -70656608 + MTA_Mm LTR MaLR 2 396 0 3 835 7411 82 13 70 chr15 32838366 32839530 -70655444 + MTA_Mm-int LTR MaLR 1 1098 0 3 835 2908 89 10 2 chr15 32839530 32839923 -70655051 + MTA_Mm LTR MaLR 1 396 0 3 835 399 269 125 25 chr15 32839988 32840148 -70654826 - MIRb SINE MIR 0 268 93 3 835 418 302 74 16 chr15 32840186 32840307 -70654667 + B4A SINE B4 12 139 -153 3 835 369 0 0 0 chr15 32840422 32840463 -70654511 + (CCA)n Simple_repeat Simple_repeat 1 41 0 3 835 423 0 0 0 chr15 32840817 32840864 -70654110 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 3 835 342 231 51 0 chr15 32841194 32841311 -70653663 - Lx6 LINE L1 -4 7456 7334 3 835 754 246 154 4 chr15 32841405 32841678 -70653296 + L1MA8 LINE L1 5760 6073 -218 3 835 28455 118 12 5 chr15 32841681 32847933 -70647041 + L1_Mus1 LINE L1 245 6566 -1 3 835 1613 108 35 0 chr15 32847937 32848196 -70646778 + L1_Mm LINE L1 3701 3968 -1915 3 835 2766 64 3 0 chr15 32848696 32849041 -70645933 + ORR1A1 LTR MaLR 1 346 0 3 835 417 95 41 21 chr15 32849082 32849179 -70645795 + (TCTCTG)n Simple_repeat Simple_repeat 6 104 0 3 835 369 136 0 0 chr15 32849176 32849242 -70645732 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 835 192 40 0 0 chr15 32849696 32849721 -70645253 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 835 277 330 0 32 chr15 32850117 32850211 -70644763 + polypurine Low_complexity Low_complexity 3 93 0 3 835 1071 88 0 7 chr15 32854044 32854192 -70640782 + B1_Mm SINE Alu 1 147 0 3 835 286 123 0 44 chr15 32854201 32854269 -70640705 + (TAAA)n Simple_repeat Simple_repeat 2 66 0 3 835 399 41 0 0 chr15 32856527 32856576 -70638398 + (CCA)n Simple_repeat Simple_repeat 2 50 0 3 835 443 269 0 77 chr15 32856576 32856684 -70638290 + B1_Mur1 SINE Alu 24 123 -26 3 835 26 0 0 0 chr15 32857473 32857499 -70637475 + AT_rich Low_complexity Low_complexity 1 26 0 3 835 294 87 0 0 chr15 32858758 32858804 -70636170 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 835 303 316 163 16 chr15 32859073 32859330 -70635644 + L1M4 LINE L1 3623 3917 -2229 3 835 245 378 39 8 chr15 32859639 32859767 -70635207 + MIRb SINE MIR 33 164 -104 3 835 417 147 0 0 chr15 32860753 32860848 -70634126 + (T)n Simple_repeat Simple_repeat 1 95 0 3 835 449 293 0 33 chr15 32861182 32861302 -70633672 - PB1D10 SINE Alu -1 116 1 3 835 333 0 0 0 chr15 32861335 32861372 -70633602 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 835 542 289 0 8 chr15 32861381 32861510 -70633464 - RSINE1 SINE B4 -36 129 2 3 835 238 293 26 13 chr15 32862704 32862780 -70632194 - ID4 SINE ID -1 82 6 3 835 217 336 32 56 chr15 32862846 32862972 -70632002 + MIR SINE MIR 112 234 -28 3 835 237 33 0 0 chr15 32863162 32863192 -70631782 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 835 239 311 0 0 chr15 32863321 32863382 -70631592 + B1F SINE Alu 12 72 -77 3 835 247 309 49 0 chr15 32863439 32863520 -70631454 + MER5A DNA MER1_type 105 189 0 3 835 303 93 0 0 chr15 32864140 32864183 -70630791 + (T)n Simple_repeat Simple_repeat 1 43 0 3 835 3363 132 46 35 chr15 32864468 32865103 -70629871 + RLTR26 LTR ERVK 1 642 0 3 835 227 300 67 0 chr15 32865475 32865565 -70629409 + MER5A DNA MER1_type 1 96 -93 3 835 506 253 24 89 chr15 32865773 32865942 -70629032 + MER5A1 DNA MER1_type 3 160 -6 3 835 294 274 77 45 chr15 32866564 32866694 -70628280 - MLT1J1 LTR MaLR -313 199 63 3 835 272 315 38 45 chr15 32866895 32867028 -70627946 - MLT1K LTR MaLR -425 170 39 3 835 209 309 12 0 chr15 32868385 32868466 -70626508 + L3 LINE CR1 4240 4321 -168 3 835 1026 103 14 0 chr15 32870237 32870382 -70624592 + B1_Mm SINE Alu 1 147 0 3 835 180 0 0 0 chr15 32870384 32870404 -70624570 + (CAAAAA)n Simple_repeat Simple_repeat 1 20 0 3 835 491 259 74 30 chr15 32870771 32871002 -70623972 - L1MB7 LINE L1 -8 6176 5936 3 835 597 254 0 23 chr15 32871000 32871173 -70623801 + Lx9 LINE L1 6992 7160 -484 3 835 579 51 0 0 chr15 32871190 32871269 -70623705 + (CA)n Simple_repeat Simple_repeat 1 79 0 3 835 742 148 95 0 chr15 32871269 32871458 -70623516 + Lx9 LINE L1 7437 7643 -1 3 835 364 175 85 85 chr15 32871486 32871592 -70623382 + B1F SINE Alu 43 148 -1 3 835 209 274 0 0 chr15 32872492 32872554 -70622420 + GA-rich Low_complexity Low_complexity 105 166 0 4 835 304 273 120 10 chr15 32872816 32872916 -70622058 + B3A SINE B2 6 116 -82 4 835 321 47 0 0 chr15 32874072 32874115 -70620859 + (T)n Simple_repeat Simple_repeat 1 43 0 4 835 189 135 0 26 chr15 32874310 32874348 -70620626 - MIRm SINE MIR -134 142 106 4 835 1713 192 19 37 chr15 32874351 32874729 -70620245 - ORR1D1 LTR MaLR -3 371 1 4 835 680 233 84 11 chr15 32874865 32875043 -70619931 + B3A SINE B2 1 191 -7 4 835 820 255 50 20 chr15 32875077 32875277 -70619697 + B3 SINE B2 1 206 -10 4 835 919 271 31 34 chr15 32876005 32876296 -70618678 - B4A SINE B4 0 292 3 4 835 429 20 0 0 chr15 32878316 32878366 -70616608 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 835 471 257 35 35 chr15 32878867 32879008 -70615966 - ID_B1 SINE B4 -2 222 82 4 835 193 231 0 0 chr15 32880000 32880039 -70614935 - MIR SINE MIR -62 146 108 4 835 450 307 58 116 chr15 32880318 32880594 -70614380 - MER2 DNA MER2_type -21 324 65 4 835 327 368 12 0 chr15 32881685 32881798 -70613176 + B1F SINE Alu 3 123 -4 4 835 22 0 0 0 chr15 32882770 32882792 -70612182 + AT_rich Low_complexity Low_complexity 1 22 0 4 835 13631 128 30 11 chr15 32882797 32884003 -70610971 + L1VL2 LINE L1 283 1526 -2089 4 835 2800 101 5 5 chr15 32884003 32884403 -70610571 - MTB LTR MaLR 0 400 1 4 835 13631 106 30 7 chr15 32884403 32886105 -70608869 + L1VL2 LINE L1 1527 3255 -360 4 835 3773 129 14 49 chr15 32886103 32887327 -70607647 - L1Md_F LINE L1 -4035 1848 675 4 835 505 205 339 5 chr15 32887795 32887981 -70606993 + RLTR11A2 LTR ERVK 13 260 -267 4 835 812 227 20 52 chr15 32888016 32888252 -70606722 + RLTR11A LTR ERVK 200 445 -132 4 835 393 244 59 0 chr15 32888640 32888759 -70606215 - MER53 DNA hAT -67 126 1 4 835 3451 23 2 0 chr15 32889031 32889426 -70605548 + MTA_Mm LTR MaLR 1 396 0 4 835 408 247 42 18 chr15 32891344 32891474 -70603500 - RLTR11A2 LTR ERVK -365 162 29 4 835 225 0 0 0 chr15 32891989 32892014 -70602960 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 835 183 80 0 0 chr15 32892927 32892952 -70602022 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 4 835 1098 229 113 18 chr15 32893349 32893633 -70601341 + ORR1D2 LTR MaLR 58 368 -2 4 835 464 0 0 18 chr15 32895360 32895417 -70599557 + (TTTTG)n Simple_repeat Simple_repeat 5 60 0 4 835 267 0 22 44 chr15 32896214 32896259 -70598715 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 835 185 0 40 0 chr15 32897096 32897121 -70597853 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 4 835 189 0 0 0 chr15 32897128 32897149 -70597825 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 4 835 650 268 36 0 chr15 32898458 32898596 -70596378 + B3A SINE B2 1 143 -55 4 104 3506 13 5 0 chr15 32898999 32899393 -70595581 + MTA_Mm LTR MaLR 1 396 0 4 836 9132 33 4 1 chr15 32899394 32900488 -70594486 + MTA_Mm-int LTR MaLR 2 1098 0 4 836 3486 15 5 0 chr15 32900488 32900882 -70594092 + MTA_Mm LTR MaLR 1 396 0 4 836 186 67 21 43 chr15 32902745 32902792 -70592182 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 4 836 521 331 39 11 chr15 32903153 32903333 -70591641 - B4 SINE B4 0 292 108 4 836 504 48 0 0 chr15 32904483 32904546 -70590428 + (CAAAA)n Simple_repeat Simple_repeat 4 66 0 4 836 261 0 0 0 chr15 32904905 32904934 -70590040 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 836 298 0 23 23 chr15 32905084 32905127 -70589847 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 836 1653 141 93 52 chr15 32905127 32905515 -70589459 - Lx LINE L1 -11 6643 6240 4 836 12719 131 13 40 chr15 32905517 32908317 -70586657 - L1VL4 LINE L1 -498 3061 362 4 836 9063 116 10 8 chr15 32908363 32909892 -70585082 - MusHAL1 LINE L1 -454 2258 728 4 836 242 190 165 12 chr15 32911174 32911259 -70583715 - Tigger14a DNA MER2_type -172 152 55 4 836 5218 94 88 29 chr15 32911677 32912492 -70582482 - L1_Mus3 LINE L1 0 6638 5776 4 836 2978 45 0 0 chr15 32912492 32912874 -70582100 - L1_Mus1 LINE L1 -544 6023 5642 4 836 279 0 0 0 chr15 32913367 32913398 -70581576 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 836 308 83 21 0 chr15 32913515 32913563 -70581411 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 836 23 54 0 0 chr15 32913659 32913696 -70581278 + AT_rich Low_complexity Low_complexity 1 37 0 4 836 243 0 0 0 chr15 32913745 32913772 -70581202 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 836 243 0 0 0 chr15 32913772 32913798 -70581176 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 836 4896 140 24 31 chr15 32914645 32915546 -70579428 - RMER17A2 LTR ERVK -11 895 1 4 836 269 331 7 76 chr15 32916097 32916241 -70578733 - MIR SINE MIR -10 252 119 4 836 382 317 24 18 chr15 32916477 32916644 -70578330 - MIR SINE MIR -5 257 90 4 836 3154 204 42 18 chr15 32916852 32917525 -70577449 - Lx5 LINE L1 -3 7047 6359 4 836 3940 86 14 10 chr15 32918086 32918664 -70576310 - Lx3_Mus LINE L1 -120 5766 5187 4 836 518 96 0 0 chr15 32918660 32918733 -70576241 + Lx3_Mus LINE L1 5760 5832 -1177 4 836 782 171 0 7 chr15 32918733 32918886 -70576088 + GA-rich Low_complexity Low_complexity 4 155 0 4 836 8096 97 20 4 chr15 32918886 32920051 -70574923 + Lx3_Mus LINE L1 5827 7009 0 4 836 32 57 0 0 chr15 32920196 32920249 -70574725 + AT_rich Low_complexity Low_complexity 1 53 0 4 836 30 0 0 0 chr15 32920379 32920409 -70574565 + AT_rich Low_complexity Low_complexity 1 30 0 4 836 265 302 0 0 chr15 32920481 32920544 -70574430 - tRNA-Ala-GCY_ tRNA tRNA -9 66 4 4 836 35 0 0 0 chr15 32921214 32921249 -70573725 + AT_rich Low_complexity Low_complexity 1 35 0 4 836 5512 111 0 4 chr15 32921249 32922051 -70572923 - L1_Mus4 LINE L1 -3 6633 5835 4 836 2073 178 5 5 chr15 32922051 32922469 -70572505 + L1_Mur1 LINE L1 4868 5285 -601 4 836 246 264 0 14 chr15 32922794 32922867 -70572107 - MER3 DNA MER1_type -1 208 137 4 836 633 38 0 0 chr15 32924259 32924339 -70570635 + (TG)n Simple_repeat Simple_repeat 2 81 0 4 836 5419 86 14 0 chr15 32924447 32925171 -70569803 - L1_Mus2 LINE L1 -2 6564 5831 4 836 8704 103 12 6 chr15 32925171 32926596 -70568378 - L1Md_F LINE L1 -3153 2730 1296 4 836 2696 199 47 60 chr15 32926596 32927836 -70567138 - L1Md_F LINE L1 -2473 1441 238 4 836 345 314 0 0 chr15 32928537 32928639 -70566335 - PB1D10 SINE Alu -14 103 2 4 836 23 0 0 0 chr15 32929430 32929453 -70565521 + AT_rich Low_complexity Low_complexity 1 23 0 4 836 335 289 0 0 chr15 32930644 32930727 -70564247 - ID4 SINE ID 0 83 1 4 836 378 0 0 0 chr15 32931430 32931472 -70563502 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 836 185 65 32 0 chr15 32931513 32931544 -70563430 + (TTG)n Simple_repeat Simple_repeat 2 33 0 4 836 31684 107 15 23 chr15 32931544 32937950 -70557024 - L1Md_F2 LINE L1 0 6582 234 4 836 1178 208 13 13 chr15 32938102 32938400 -70556574 + L1Md_F LINE L1 670 967 -5649 4 836 16347 135 11 20 chr15 32938393 32938921 -70556053 + L1Md_F LINE L1 2674 3178 -2705 4 836 262 61 41 0 chr15 32938921 32938970 -70556004 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 4 836 16347 135 11 20 chr15 32938970 32941357 -70553617 + L1Md_F LINE L1 3179 5564 -319 4 836 838 85 0 124 chr15 32941357 32941518 -70553456 + L1_Mus2 LINE L1 6426 6566 0 4 836 392 279 40 52 chr15 32941646 32941674 -70553300 - ID_B1 SINE B4 -47 245 150 4 836 441 289 44 0 chr15 32941674 32941788 -70553186 - B1F SINE Alu -6 143 25 4 836 392 279 40 52 chr15 32941788 32941803 -70553171 - ID_B1 SINE B4 -47 149 91 4 836 21 0 0 0 chr15 32942129 32942150 -70552824 + AT_rich Low_complexity Low_complexity 1 21 0 4 836 279 214 0 0 chr15 32942264 32942334 -70552640 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 836 371 21 0 20 chr15 32942334 32942383 -70552591 + (CCA)n Simple_repeat Simple_repeat 3 50 0 4 836 362 266 0 0 chr15 32944700 32944779 -70550195 - PB1D10 SINE Alu -5 112 34 4 836 216 0 0 0 chr15 32946264 32946288 -70548686 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 836 3289 40 8 0 chr15 32946404 32946805 -70548169 - L1Md_F2 LINE L1 0 6582 6179 4 836 237 266 152 19 chr15 32947044 32947177 -70547797 + MIRb SINE MIR 1 165 -103 4 836 2135 137 68 0 chr15 32947177 32947543 -70547431 - ORR1B1 LTR MaLR -3 391 1 4 836 234 284 201 41 chr15 32947543 32947578 -70547396 + MIR SINE MIR 164 196 -66 4 836 246 317 23 141 chr15 32947802 32948058 -70546916 - MLT1H LTR MaLR 0 569 232 4 836 272 239 0 29 chr15 32948091 32948160 -70546814 + (TATG)n Simple_repeat Simple_repeat 4 70 0 4 836 326 343 41 34 chr15 32948279 32948507 -70546467 - ORR1E LTR MaLR -136 234 4 4 836 236 30 30 0 chr15 32949416 32949449 -70545525 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 836 478 246 181 0 chr15 32950542 32950680 -70544294 + Lx9 LINE L1 6444 6606 -1038 4 836 240 261 30 129 chr15 32950864 32950965 -70544009 - L2a LINE L2 -2 3424 3334 4 836 688 260 128 135 chr15 32951460 32951771 -70543203 - MLT1A1 LTR MaLR -2 406 84 4 836 1015 115 14 0 chr15 32951771 32951910 -70543064 - B1_Mus1 SINE Alu -6 142 2 4 836 688 260 128 135 chr15 32951910 32951990 -70542984 - MLT1A1 LTR MaLR -325 83 18 4 836 344 327 84 98 chr15 32952260 32952529 -70542445 - ORR1E LTR MaLR 0 359 98 4 836 1079 172 113 0 chr15 32952529 32952732 -70542242 + URR1A DNA MER1_type 1 226 0 4 836 344 327 84 98 chr15 32952732 32952808 -70542166 - ORR1E LTR MaLR -262 97 19 4 836 250 278 73 9 chr15 32952860 32952969 -70542005 - L2a LINE L2 -1387 2032 1917 4 836 28 61 0 0 chr15 32956275 32956324 -70538650 + AT_rich Low_complexity Low_complexity 1 49 0 4 836 1765 188 75 105 chr15 32956701 32957130 -70537844 + MTC LTR MaLR 6 421 0 4 836 342 0 0 0 chr15 32957320 32957358 -70537616 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 836 362 276 50 25 chr15 32957413 32957532 -70537442 - B4 SINE B4 -169 123 2 4 836 387 221 0 23 chr15 32958157 32958240 -70536734 - MTE2a LTR MaLR -81 338 240 4 836 1023 99 20 0 chr15 32959071 32959222 -70535752 + L1_Mus1 LINE L1 5853 6006 -630 4 836 932 41 0 0 chr15 32959231 32959352 -70535622 + L1_Mus1 LINE L1 5931 6051 -516 4 836 570 15 0 0 chr15 32959350 32959418 -70535556 - L1_Mm LINE L1 -889 4994 4927 4 836 3337 20 0 2 chr15 32959413 32959818 -70535156 + L1Md_T LINE L1 5183 5586 -297 5 836 8392 34 0 1 chr15 32959818 32960812 -70534162 + L1Md_T LINE L1 5587 6579 -3 5 836 4131 77 0 2 chr15 32960837 32961373 -70533601 + L1_Mus1 LINE L1 6033 6567 0 4 836 4185 111 3 16 chr15 32961384 32962031 -70532943 + L1_Mus4 LINE L1 5998 6636 0 5 836 237 316 76 0 chr15 32963452 32963531 -70531443 + MamGypLTR1b LTR Gypsy 490 574 -208 5 836 1511 253 91 3 chr15 32965145 32965517 -70529457 + MTD LTR MaLR 2 406 -13 5 836 336 323 21 0 chr15 32965600 32965693 -70529281 + PB1 SINE Alu 11 105 -22 5 836 244 96 19 37 chr15 32966676 32966730 -70528244 + (TTTG)n Simple_repeat Simple_repeat 4 56 0 5 836 279 274 106 12 chr15 32966997 32967082 -70527892 - MLT1I LTR MaLR -280 131 39 5 836 191 357 24 12 chr15 32967307 32967392 -70527582 + L2 LINE L2 2724 2809 -610 5 836 697 304 88 9 chr15 32969308 32969521 -70525453 + B4A SINE B4 1 230 -62 5 836 223 333 0 18 chr15 32969521 32969576 -70525398 + RSINE1 SINE B4 3 56 -109 5 836 324 0 0 0 chr15 32969623 32969659 -70525315 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 836 343 164 0 0 chr15 32969797 32969852 -70525122 + HAL1-3A_ME LINE L1 1975 2029 -829 5 836 974 248 33 75 chr15 32970466 32970771 -70524203 + L1VL1 LINE L1 194 485 -5937 5 836 881 83 0 0 chr15 32970773 32970905 -70524069 + MusHAL1 LINE L1 211 342 -2370 5 836 20185 133 7 20 chr15 32970901 32973282 -70521692 + L1_Mus3 LINE L1 2370 4745 -1138 5 836 919 118 22 0 chr15 32973282 32973418 -70521556 + B1_Mus1 SINE Alu 1 139 -9 5 836 378 0 0 0 chr15 32973418 32973460 -70521514 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 5 836 20185 111 52 16 chr15 32973460 32975312 -70519662 + L1_Mus3 LINE L1 4746 6636 -2 5 836 201 94 36 36 chr15 32975724 32975779 -70519195 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 5 836 364 247 0 53 chr15 32977426 32977520 -70517454 + MLT1A0 LTR MaLR 260 348 -17 5 836 1187 174 62 0 chr15 32978054 32978295 -70516679 - Lx2 LINE L1 0 6997 6742 5 836 1654 159 196 5 chr15 32978300 32978724 -70516250 + L1_Mur2 LINE L1 4366 4870 -1007 5 836 903 19 0 0 chr15 32978766 32978871 -70516103 + (TC)n Simple_repeat Simple_repeat 2 106 0 5 836 26169 101 6 20 chr15 32978931 32980247 -70514727 - L1_Mus2 LINE L1 0 6566 5300 5 836 216 0 0 0 chr15 32980247 32980271 -70514703 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 836 1012 90 0 0 chr15 32980273 32980406 -70514568 - B1_Mus1 SINE Alu -11 137 5 5 836 26169 143 25 23 chr15 32980406 32985185 -70509789 - L1_Mus2 LINE L1 -584 5299 509 5 836 426 259 113 30 chr15 32985208 32985723 -70509251 - L1MA4 LINE L1 -420 5880 5320 5 836 360 278 52 0 chr15 32986064 32986161 -70508813 - PB1D7 SINE Alu 0 120 19 5 836 761 291 49 12 chr15 32986384 32986631 -70508343 - MLT1B LTR MaLR -1 389 134 5 836 848 241 32 0 chr15 32987118 32987305 -70507669 + MTD LTR MaLR 227 419 0 5 836 254 302 84 25 chr15 32987576 32987695 -70507279 - MLT1K LTR MaLR -27 568 443 5 836 183 42 0 0 chr15 32987744 32987768 -70507206 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 5 836 4334 138 4 1 chr15 32988280 32988977 -70505997 - Lx3A LINE L1 -117 6864 6166 5 836 3711 98 11 7 chr15 32988968 32989794 -70505180 + Lx3_Mus LINE L1 5370 6192 -817 5 836 678 274 117 0 chr15 32990109 32990339 -70504635 - Tigger5 DNA MER2_type 0 2406 2150 5 836 367 286 237 12 chr15 32990497 32990670 -70504304 - Tigger5 DNA MER2_type -2189 217 6 5 836 28 0 0 0 chr15 32990920 32990948 -70504026 + AT_rich Low_complexity Low_complexity 1 28 0 5 836 23 33 0 0 chr15 32991013 32991043 -70503931 + AT_rich Low_complexity Low_complexity 1 30 0 5 836 657 174 0 0 chr15 32991198 32991330 -70503644 + (TA)n Simple_repeat Simple_repeat 2 133 0 5 836 3619 148 28 10 chr15 32991579 32992698 -70502276 + L1VL4 LINE L1 233 1367 -2192 5 836 2911 159 47 8 chr15 32992712 32993376 -70501598 + L1_Mur1 LINE L1 3135 3824 -2062 5 836 1737 103 14 15 chr15 32993384 32993658 -70501316 - LTRIS2 LTR ERV1 0 564 240 5 836 226 31 0 30 chr15 32993638 32993671 -70501303 + RLTR6_Mm LTR ERV1 613 644 -10 5 836 814 130 123 12 chr15 32994285 32994456 -70500518 + RMER16-int LTR ERVK 141 330 -5076 5 836 4008 144 38 20 chr15 32994440 32995178 -70499796 + RMER16-int LTR ERVK 676 1426 -3980 5 836 473 202 37 75 chr15 32995178 32995312 -70499662 + RMER16-int LTR ERVK 1316 1444 -3962 5 836 576 156 23 30 chr15 32995370 32995502 -70499472 + MuRRS4-int LTR ERV1 848 978 -4085 5 836 6033 186 46 38 chr15 32995493 32998360 -70496614 + MuRRS4-int LTR ERV1 1149 4266 -797 5 836 858 192 68 0 chr15 32998356 32998575 -70496399 + MuRRS4-int LTR ERV1 4788 5021 -42 5 836 4196 75 7 16 chr15 32998576 32999145 -70495829 + LTRIS2 LTR ERV1 1 564 0 5 836 4448 90 13 16 chr15 32999145 33000000 -70494974 - MuRRS4-int LTR ERV1 -1672 3391 2226 5 836 570 57 0 0 chr15 33000000 33000070 -70494904 - RLTR1B-int LTR ERV1 -1545 1754 1685 1 836 2320 104 8 43 chr15 33000067 33000440 -70494534 + MuRRS4-int LTR ERV1 2003 2362 -2701 2 836 1882 91 5 149 chr15 33000438 33000853 -70494121 - RLTR1B-int LTR ERV1 -1750 1549 1195 1 836 1593 278 30 11 chr15 33000847 33001407 -70493567 - MuRRS4-int LTR ERV1 -3438 1625 1055 3 836 4284 132 17 17 chr15 33001407 33002131 -70492843 - RMER16-int LTR ERVK -4005 1401 678 4 836 1749 215 8 3 chr15 33002148 33002542 -70492432 - MuRRS4-int LTR ERV1 -3716 974 374 3 836 3603 74 91 21 chr15 33003150 33003675 -70491299 - LTRIS2 LTR ERV1 0 564 3 5 836 2815 141 19 17 chr15 33003677 33004210 -70490764 + Lx3_Mus LINE L1 3820 4353 -1524 6 836 2924 173 58 111 chr15 33004210 33005063 -70489911 + RLTR13C2 LTR ERVK 1 1114 0 7 836 5411 151 40 88 chr15 33005063 33006839 -70488135 + Lx3_Mus LINE L1 4357 6034 -975 6 836 2945 107 41 17 chr15 33006841 33007084 -70487890 + Lx3_Mus LINE L1 6530 6775 -234 6 836 585 28 0 0 chr15 33007084 33007155 -70487819 + (CA)n Simple_repeat Simple_repeat 2 72 0 8 836 2945 107 41 17 chr15 33007155 33007376 -70487598 + Lx3_Mus LINE L1 6776 7003 -6 6 836 705 67 9 0 chr15 33007379 33007484 -70487490 + L1_Mus1 LINE L1 6462 6567 0 9 836 7116 142 18 0 chr15 33007488 33008966 -70486008 + Lx2 LINE L1 5267 6774 -223 1 836 1214 167 43 4 chr15 33008975 33009210 -70485764 - Lx2 LINE L1 -667 6330 6087 1 836 1343 146 5 0 chr15 33009210 33009429 -70485545 + Lx2 LINE L1 6778 6997 0 1 836 207 0 0 0 chr15 33009559 33009582 -70485392 + (T)n Simple_repeat Simple_repeat 1 23 0 1 836 686 98 0 0 chr15 33009912 33010004 -70484970 - BC1_Mm scRNA scRNA -60 92 1 1 836 288 343 20 34 chr15 33010494 33010688 -70484286 - ORR1D2 LTR MaLR -177 193 4 1 836 310 323 95 58 chr15 33011047 33011242 -70483732 + MIR SINE MIR 26 248 -20 1 836 307 295 147 71 chr15 33011361 33011613 -70483361 + MER5C DNA MER1_type 36 306 -7 1 836 330 324 36 18 chr15 33011846 33011956 -70483018 - PB1D10 SINE Alu 0 117 6 1 836 243 61 0 0 chr15 33011974 33012007 -70482967 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 836 475 260 58 13 chr15 33012163 33012319 -70482655 + Lx5 LINE L1 6881 7043 -7 1 836 336 48 0 0 chr15 33012321 33012363 -70482611 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 2 836 303 182 21 103 chr15 33012549 33012662 -70482312 - PB1D7 SINE Alu 0 120 18 2 836 792 289 5 10 chr15 33014174 33014370 -70480604 - B4A SINE B4 0 292 98 2 836 26 0 0 0 chr15 33014839 33014865 -70480109 + AT_rich Low_complexity Low_complexity 1 26 0 2 836 298 248 186 10 chr15 33014876 33014978 -70479996 + RSINE1 SINE B4 10 129 -36 2 836 212 292 196 10 chr15 33015002 33015099 -70479875 + PB1D10 SINE Alu 1 115 -2 2 836 222 284 10 50 chr15 33015749 33015849 -70479125 + CT-rich Low_complexity Low_complexity 4 99 0 2 836 571 254 8 30 chr15 33015860 33015994 -70478980 - B1F SINE Alu -8 141 11 2 836 295 325 28 159 chr15 33016182 33016434 -70478540 + B4A SINE B4 74 292 0 2 836 218 273 43 139 chr15 33017772 33017887 -70477087 - B4 SINE B4 -162 130 27 2 836 521 262 397 15 chr15 33017977 33018181 -70476793 + MTE2b LTR MaLR 39 320 -59 3 836 790 301 53 9 chr15 33018295 33018520 -70476454 - B4A SINE B4 -6 286 52 3 836 366 302 56 45 chr15 33018575 33018863 -70476111 - L1MCb LINE L1 -5747 298 8 3 836 644 317 35 76 chr15 33019102 33019300 -70475674 + B3A SINE B2 1 190 -8 3 836 2213 113 38 6 chr15 33019307 33019646 -70475328 + Lx3_Mus LINE L1 6660 7009 0 3 836 197 33 33 0 chr15 33020001 33020031 -70474943 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 3 836 4476 107 0 3 chr15 33020626 33021327 -70473647 - L1_Mus1 LINE L1 -1823 4060 3362 3 836 7287 143 6 104 chr15 33021317 33024135 -70470839 + L1_Mus1 LINE L1 4055 6562 -5 3 836 907 57 0 146 chr15 33024148 33024312 -70470662 + B1_Mm SINE Alu 1 140 -7 3 836 450 0 0 0 chr15 33024312 33024362 -70470612 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 836 389 20 20 0 chr15 33024363 33024413 -70470561 + (GAAAA)n Simple_repeat Simple_repeat 5 55 0 3 836 269 343 47 24 chr15 33024697 33024867 -70470107 + MIR SINE MIR 79 252 -10 4 836 184 340 46 33 chr15 33025101 33025253 -70469721 - L2 LINE L2 -1908 1511 1358 4 836 341 232 0 21 chr15 33026156 33026252 -70468722 - MER74A LTR ERVL -26 596 470 4 836 543 31 0 0 chr15 33026491 33026556 -70468418 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 4 836 212 256 0 0 chr15 33026877 33026920 -70468054 + polypyrimidine Low_complexity Low_complexity 3 45 0 4 836 497 88 0 12 chr15 33026923 33027004 -70467970 + (CA)n Simple_repeat Simple_repeat 1 80 0 4 836 25 65 0 0 chr15 33027004 33027050 -70467924 + AT_rich Low_complexity Low_complexity 1 46 0 4 836 424 217 7 52 chr15 33027070 33027206 -70467768 - L1MA5 LINE L1 -463 5837 5708 4 836 677 249 126 56 chr15 33027220 33027620 -70467354 - RLTR28B LTR ERVL -41 440 1 4 836 356 287 164 35 chr15 33027623 33027854 -70467120 - L1MA5 LINE L1 -589 5711 5451 4 836 436 325 43 38 chr15 33027903 33028300 -70466674 + L1MDa LINE L1 1669 2067 -4566 4 836 207 0 0 0 chr15 33028338 33028361 -70466613 + (T)n Simple_repeat Simple_repeat 1 23 0 5 836 921 96 0 161 chr15 33028370 33028544 -70466430 - B1_Mus2 SINE Alu 0 147 2 5 836 326 272 39 10 chr15 33028544 33028638 -70466336 + L1MDa LINE L1 2121 2217 -4416 4 836 246 105 0 0 chr15 33028713 33028751 -70466223 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 5 836 225 241 36 27 chr15 33028759 33028870 -70466104 + L1MDa LINE L1 2351 2462 -4171 4 836 2732 59 6 55 chr15 33028909 33029306 -70465668 - ORR1A0 LTR MaLR -12 347 1 5 104 299 318 53 26 chr15 33030139 33030252 -70464722 - L2a LINE L2 -29 3397 3282 5 837 695 261 14 81 chr15 33030268 33030552 -70464422 - RLTR9A LTR ERVK 0 368 104 5 837 2406 100 158 5 chr15 33031275 33031706 -70463268 - RMER16-int LTR ERVK -3344 2062 1566 5 837 789 198 47 155 chr15 33031718 33032071 -70462903 - RLTR9E LTR ERVK -7 402 1 5 837 305 135 12 119 chr15 33032073 33032157 -70462817 - ETnERV2-int LTR ERVK -3 7403 7329 5 837 837 223 245 10 chr15 33032157 33032496 -70462478 - RLTR13D6 LTR ERVK -365 537 118 5 837 11276 98 21 33 chr15 33032496 33034240 -70460734 - ETnERV2-int LTR ERVK -236 7170 5449 5 837 9021 219 24 18 chr15 33034237 33036959 -70458015 - ETnERV2-int LTR ERVK -2095 5311 1790 5 837 9649 156 8 10 chr15 33037188 33038856 -70456118 - ETnERV2-int LTR ERVK -1647 1667 3 5 837 856 210 169 39 chr15 33038858 33039220 -70455754 - RLTR9E LTR ERVK 0 409 1 5 837 4679 163 59 50 chr15 33039460 33039695 -70455279 - ETnERV2-int LTR ERVK -5215 2191 1945 5 837 321 26 0 0 chr15 33039695 33039733 -70455241 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 837 4679 163 59 50 chr15 33039733 33040620 -70454354 - ETnERV2-int LTR ERVK -5462 1944 1061 5 837 237 82 20 39 chr15 33040648 33040699 -70454275 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 6 837 529 206 3 70 chr15 33041013 33041170 -70453804 - RLTR9A LTR ERVK 0 368 158 6 837 261 309 19 26 chr15 33041247 33041403 -70453571 + (TATG)n Simple_repeat Simple_repeat 4 158 0 6 837 2630 34 0 6 chr15 33041806 33042130 -70452844 - ORR1A1 LTR MaLR -24 322 1 6 837 632 190 229 6 chr15 33042247 33042422 -70452552 + URR1A DNA MER1_type 2 215 -11 6 837 417 328 110 79 chr15 33042945 33043236 -70451738 - MLT1L LTR MaLR -166 444 145 6 837 292 22 44 0 chr15 33043402 33043447 -70451527 + (TATG)n Simple_repeat Simple_repeat 2 48 0 6 837 240 299 52 0 chr15 33043465 33043562 -70451412 - Lx9 LINE L1 -204 7440 7339 6 837 29 47 0 0 chr15 33044121 33044164 -70450810 + AT_rich Low_complexity Low_complexity 1 43 0 6 837 594 95 0 0 chr15 33044195 33044290 -70450684 + (CA)n Simple_repeat Simple_repeat 1 95 0 7 837 616 225 90 36 chr15 33045224 33045390 -70449584 + ORR1D1 LTR MaLR 1 175 -199 7 837 302 329 62 34 chr15 33045380 33045559 -70449415 - MLT1D LTR MaLR -291 214 31 7 837 428 65 0 16 chr15 33045635 33045698 -70449276 + ORR1A1 LTR MaLR 285 346 0 7 837 1284 141 12 4 chr15 33045699 33045942 -70449032 + L1_Mur3 LINE L1 1380 1624 -4256 7 837 1837 161 247 36 chr15 33045959 33046647 -70448327 + L1_Mur3 LINE L1 2541 3373 -2507 7 837 8042 124 35 16 chr15 33046655 33048019 -70446955 - Lx3A LINE L1 -3 6978 5590 7 837 6462 43 0 2 chr15 33048020 33048836 -70446138 - RLTR10-int LTR ERVK -182 1805 992 7 837 517 329 69 15 chr15 33048920 33049312 -70445662 - IAP-d-int LTR ERVK -5392 1150 738 7 837 6469 67 54 7 chr15 33049366 33049870 -70445104 - RLTR10-int LTR ERVK -993 994 448 7 837 2672 10 0 0 chr15 33049870 33050172 -70444802 - L1Md_A LINE L1 0 6582 6281 7 837 6469 67 54 7 chr15 33050172 33050578 -70444396 - RLTR10-int LTR ERVK -1540 447 41 7 837 2760 65 47 39 chr15 33050590 33050975 -70443999 - RLTR10 LTR ERVK -2 388 1 7 837 8992 85 51 36 chr15 33050978 33052476 -70442498 - L1_Mur1 LINE L1 -298 5588 4068 7 837 1808 189 11 44 chr15 33052473 33053114 -70441860 - L1_Mur1 LINE L1 -6016 968 16 7 837 311 149 0 29 chr15 33053101 33053170 -70441804 + L1_Mur3 LINE L1 3350 3416 -2464 8 837 360 0 0 0 chr15 33053189 33053229 -70441745 + (TA)n Simple_repeat Simple_repeat 1 40 0 8 837 6996 129 7 11 chr15 33053230 33055154 -70439820 - L1_Mus4 LINE L1 -10 6626 4712 8 837 241 123 0 66 chr15 33055225 33055286 -70439688 + A-rich Low_complexity Low_complexity 2 58 0 8 837 22 0 0 0 chr15 33055311 33055333 -70439641 + AT_rich Low_complexity Low_complexity 1 22 0 8 837 1226 272 14 101 chr15 33055342 33055780 -70439194 - RLTR11A LTR ERVK -29 499 100 8 837 2259 217 57 6 chr15 33055809 33056315 -70438659 + Lx6 LINE L1 6697 7228 -232 8 837 451 72 59 40 chr15 33056348 33056449 -70438525 + CT-rich Low_complexity Low_complexity 4 106 0 8 837 405 0 0 0 chr15 33056485 33056530 -70438444 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 837 625 243 14 0 chr15 33056560 33056704 -70438270 + Lx6 LINE L1 7296 7441 -19 8 837 188 393 102 24 chr15 33056940 33057146 -70437828 + MIRb SINE MIR 17 238 -30 8 837 23434 72 4 2 chr15 33057178 33061170 -70433804 - L1Md_F2 LINE L1 0 6582 2581 9 837 877 141 49 6 chr15 33061186 33061350 -70433624 + Lx LINE L1 6478 6648 -6 9 837 279 71 0 0 chr15 33061356 33061398 -70433576 + (TA)n Simple_repeat Simple_repeat 2 43 0 9 837 2002 233 7 29 chr15 33062264 33062376 -70432598 + MTC LTR MaLR 8 115 -306 9 837 2185 84 16 25 chr15 33062376 33062695 -70432279 + L1Md_F2 LINE L1 6264 6579 -3 9 837 2002 233 7 29 chr15 33062695 33063002 -70431972 + MTC LTR MaLR 116 418 -3 9 837 10219 155 61 18 chr15 33063004 33066598 -70428376 + L1Md_F LINE L1 244 3850 -2036 9 837 2816 75 44 0 chr15 33066596 33067025 -70427949 - L1_Mus2 LINE L1 -531 6035 5588 9 837 4047 61 4 0 chr15 33067247 33067770 -70427204 - L1_Mus2 LINE L1 0 6566 6042 9 837 3345 157 37 0 chr15 33067772 33068392 -70426582 + L1_Mm LINE L1 5184 5826 -57 9 837 2822 49 7 139 chr15 33068395 33068842 -70426132 - RLTR10 LTR ERVK -2 388 1 9 837 14607 32 28 39 chr15 33068842 33070809 -70424165 - RLTR10-int LTR ERVK -1 1986 41 9 837 2810 52 7 139 chr15 33070821 33071268 -70423706 - RLTR10 LTR ERVK -2 388 1 9 837 273 263 75 46 chr15 33071332 33071491 -70423483 - MIRb SINE MIR -50 218 55 1 837 839 295 174 15 chr15 33071543 33071935 -70423039 - MER82 DNA MER2_type -190 463 10 1 837 224 186 0 0 chr15 33072095 33072138 -70422836 + L2b LINE L2 3333 3375 0 1 837 441 327 18 48 chr15 33072261 33072428 -70422546 - RSINE1 SINE B4 -1 164 3 1 837 10853 178 9 73 chr15 33073599 33074282 -70420692 - L1_Mur2 LINE L1 -464 5413 4732 1 837 216 0 0 0 chr15 33074282 33074306 -70420668 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 837 10853 178 9 73 chr15 33074306 33074770 -70420204 - L1_Mur2 LINE L1 -1146 4731 4271 1 837 494 140 0 20 chr15 33074770 33074872 -70420102 - L1Md_F2 LINE L1 -2 6580 6481 1 837 10853 178 9 73 chr15 33074872 33076306 -70418668 - L1_Mur2 LINE L1 -1607 4270 2996 1 837 482 330 0 0 chr15 33076702 33076822 -70418152 - B1F SINE Alu 0 120 1 1 837 232 343 15 0 chr15 33076762 33076829 -70418145 - B4A SINE B4 -147 145 78 1 837 351 362 14 7 chr15 33077490 33077629 -70417345 - MER102a DNA MER1_type -172 158 19 1 837 180 0 0 0 chr15 33077707 33077727 -70417247 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 837 616 200 0 0 chr15 33077906 33078016 -70416958 + Lx4A LINE L1 6709 6818 -240 1 837 11301 118 20 19 chr15 33078026 33080359 -70414615 - L1Md_F LINE L1 -2805 3078 745 1 837 355 297 22 0 chr15 33080376 33080514 -70414460 - L1Md_F LINE L1 -5801 815 675 1 837 498 291 13 114 chr15 33080584 33080821 -70414153 - L1VL1 LINE L1 -6183 239 27 1 837 633 277 57 14 chr15 33081240 33081449 -70413525 - Tigger7 DNA MER2_type -36 2455 2239 1 837 1109 258 151 30 chr15 33081451 33081815 -70413159 - Tigger7 DNA MER2_type -2083 408 1 1 837 1335 158 9 13 chr15 33082155 33082380 -70412594 - URR1B DNA MER1_type -1 224 1 1 837 223 157 19 56 chr15 33082531 33082585 -70412389 + MIR3 SINE MIR 151 202 -6 1 837 1106 117 39 6 chr15 33082957 33082972 -70412002 - B2_Mm2 SINE B2 -8 187 173 1 837 5011 99 47 7 chr15 33082972 33083044 -70411930 - Lx3_Mus LINE L1 -1 7008 6919 1 837 2180 98 119 11 chr15 33083044 33083396 -70411578 + RLTR10 LTR ERVK 1 390 0 1 837 5011 99 47 7 chr15 33083396 33084054 -70410920 - Lx3_Mus LINE L1 -91 6918 6249 1 837 1106 117 39 6 chr15 33084054 33084218 -70410756 - B2_Mm2 SINE B2 -23 172 3 1 837 27 0 0 0 chr15 33084393 33084420 -70410554 + AT_rich Low_complexity Low_complexity 1 27 0 1 837 1466 148 25 0 chr15 33085128 33085365 -70409609 + RMER19B LTR ERVK 1 243 -659 1 837 1182 148 63 10 chr15 33085359 33085564 -70409410 + RMER19B LTR ERVK 636 851 -51 1 837 273 89 0 0 chr15 33085588 33085633 -70409341 + (A)n Simple_repeat Simple_repeat 1 45 0 1 837 2847 169 103 33 chr15 33085659 33086211 -70408763 + RMER19B LTR ERVK 300 890 -12 1 837 368 103 17 0 chr15 33086652 33086710 -70408264 - RLTR25B LTR ERVK -1 1102 1044 1 837 3452 183 54 78 chr15 33086704 33087285 -70407689 - RLTR25B LTR ERVK -227 876 328 1 837 3067 50 39 3 chr15 33087285 33087667 -70407307 + MTA_Mm LTR MaLR 1 396 0 1 837 3452 150 22 43 chr15 33087667 33087855 -70407119 - RLTR25B LTR ERVK -701 327 142 1 837 594 0 0 0 chr15 33087855 33087921 -70407053 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 1 837 3452 150 22 43 chr15 33087921 33088050 -70406924 - RLTR25B LTR ERVK -887 141 2 1 837 2922 65 151 9 chr15 33088736 33089200 -70405774 + RLTR47_MM LTR ERV1 1 530 -2 1 837 5427 161 20 27 chr15 33089799 33090769 -70404205 - Lx4A LINE L1 -15 7043 6081 1 837 968 76 94 0 chr15 33090769 33090940 -70404034 - L1_Mur2 LINE L1 -4007 1870 1684 1 837 24776 92 120 6 chr15 33090938 33095839 -70399135 - L1_Mus1 LINE L1 -423 6144 654 1 837 186 128 0 0 chr15 33095839 33095878 -70399096 + (CTG)n Simple_repeat Simple_repeat 1 39 0 1 837 3911 164 89 17 chr15 33095878 33096085 -70398889 - L1_Mus1 LINE L1 -6071 653 472 1 837 9215 125 350 4 chr15 33096086 33097090 -70397884 - L1Md_F LINE L1 -1087 4796 3564 1 837 306 0 0 0 chr15 33097090 33097124 -70397850 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 1 837 9215 125 350 4 chr15 33097124 33098357 -70396617 - L1Md_F LINE L1 -2320 3563 1785 1 837 37567 28 2 8 chr15 33098441 33104618 -70390356 - L1Md_T LINE L1 -3 6579 440 1 837 3544 151 29 45 chr15 33104618 33106011 -70388963 - L1Md_F LINE L1 -2116 1798 437 1 837 1916 184 11 94 chr15 33106011 33106479 -70388495 - L1_Mur2 LINE L1 -5990 722 294 1 837 459 0 0 0 chr15 33106529 33106580 -70388394 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 837 779 275 149 21 chr15 33106580 33106669 -70388305 - L1_Mur3 LINE L1 -1523 4357 4255 1 837 5079 77 1 9 chr15 33106669 33107363 -70387611 - L1Md_F2 LINE L1 0 6582 5894 1 837 779 275 149 21 chr15 33107363 33107831 -70387143 - L1_Mur3 LINE L1 -1626 4254 3730 1 837 530 294 90 40 chr15 33108045 33108268 -70386706 - Lx8 LINE L1 -8 7465 7232 1 837 328 288 8 0 chr15 33108299 33108417 -70386557 - L1_Mur3 LINE L1 -3590 2290 2172 1 837 1203 107 0 0 chr15 33108442 33108620 -70386354 + (TCTCC)n Simple_repeat Simple_repeat 1 178 0 1 837 213 211 0 0 chr15 33108635 33108687 -70386287 + CT-rich Low_complexity Low_complexity 1 52 0 1 837 357 274 66 0 chr15 33109429 33109535 -70385439 + MER5A1 DNA MER1_type 53 165 -1 1 837 715 301 87 67 chr15 33110208 33110553 -70384421 - ORR1E LTR MaLR 0 359 8 1 837 417 246 103 17 chr15 33110817 33110933 -70384041 - B3 SINE B2 -3 213 88 1 837 2250 120 12 6 chr15 33110933 33111260 -70383714 - ORR1A4 LTR MaLR 0 329 1 1 837 281 295 79 92 chr15 33111260 33111341 -70383633 - B2_Mm2 SINE B2 -114 81 1 1 837 387 0 0 0 chr15 33111347 33111390 -70383584 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1 837 423 0 0 0 chr15 33111390 33111436 -70383538 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 837 196 329 77 26 chr15 33112280 33112436 -70382538 - MIRc SINE MIR -2 266 103 1 837 416 343 48 24 chr15 33112554 33112763 -70382211 - MIRb SINE MIR -21 247 34 1 837 780 277 5 69 chr15 33112842 33113044 -70381930 - B3A SINE B2 -8 190 2 1 837 193 347 189 5 chr15 33113194 33113385 -70381589 - MIRb SINE MIR -3 265 40 1 837 225 374 88 11 chr15 33114478 33114659 -70380315 + MIRb SINE MIR 27 221 -47 1 837 22152 165 28 10 chr15 33115766 33118411 -70376563 + L1_Mus4 LINE L1 411 3142 -2741 1 837 933 35 0 0 chr15 33118411 33118524 -70376450 + (CAAAG)n Simple_repeat Simple_repeat 2 114 0 1 837 22152 170 21 15 chr15 33118524 33120031 -70374943 + L1_Mus4 LINE L1 3143 4626 -1257 1 837 215 39 0 105 chr15 33120031 33120088 -70374886 + (CAA)n Simple_repeat Simple_repeat 2 52 0 1 837 22152 140 15 26 chr15 33120088 33122114 -70372860 + L1_Mus4 LINE L1 4627 6631 -5 1 837 351 312 53 91 chr15 33122292 33122634 -70372340 + L1ME1 LINE L1 5713 6041 -138 1 837 25 0 0 0 chr15 33124553 33124578 -70370396 + AT_rich Low_complexity Low_complexity 1 25 0 1 837 7542 80 112 5 chr15 33124578 33125683 -70369291 - Lx3_Mus LINE L1 0 7009 5787 1 837 3875 91 5 2 chr15 33125688 33126250 -70368724 + Lx3_Mus LINE L1 5187 5750 -136 1 837 25471 94 11 137 chr15 33128342 33135436 -70359538 - L1Md_F2 LINE L1 -1 6581 431 1 837 692 231 91 21 chr15 33136820 33137006 -70357968 - MTE2b LTR MaLR -43 336 138 1 837 228 235 73 32 chr15 33137608 33137731 -70357243 - MER33 DNA MER1_type -43 281 154 1 837 347 60 20 0 chr15 33137818 33137868 -70357106 + (TATG)n Simple_repeat Simple_repeat 2 52 0 1 837 192 111 0 0 chr15 33137941 33137977 -70356997 + (TTCC)n Simple_repeat Simple_repeat 3 38 0 1 837 519 109 6 8 chr15 33137980 33138060 -70356914 - B1_Mur4 SINE Alu -7 143 32 1 837 966 63 0 0 chr15 33138060 33138186 -70356788 + (TTC)n Simple_repeat Simple_repeat 2 127 0 1 837 234 281 16 0 chr15 33138218 33138282 -70356692 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 1 837 12663 82 6 0 chr15 33138577 33141072 -70353902 + L1_Mus1 LINE L1 4057 6567 0 1 837 265 336 0 9 chr15 33141096 33141201 -70353773 - MLT1A0 LTR MaLR 0 365 262 1 837 543 313 50 0 chr15 33141459 33141641 -70353333 + MER3 DNA MER1_type 17 207 -2 1 837 429 309 12 68 chr15 33141751 33141914 -70353060 + MIR SINE MIR 98 251 -11 1 837 187 253 78 33 chr15 33141989 33142079 -70352895 + L2a LINE L2 3333 3426 0 1 837 718 265 76 22 chr15 33143091 33143276 -70351698 - ID_B1 SINE B4 -6 218 24 1 837 984 279 136 2 chr15 33143797 33144335 -70350639 - L1MB8 LINE L1 -187 5991 5382 1 837 216 250 0 0 chr15 33144369 33144417 -70350557 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 837 391 348 126 0 chr15 33144419 33144554 -70350420 - RSINE1 SINE B4 -2 163 12 1 837 461 131 0 12 chr15 33144565 33144650 -70350324 + (TC)n Simple_repeat Simple_repeat 2 85 0 1 837 384 218 0 0 chr15 33144649 33144736 -70350238 + (TA)n Simple_repeat Simple_repeat 2 88 0 1 837 3463 171 14 0 chr15 33144847 33145551 -70349423 + Lx2B LINE L1 3627 4340 -1537 1 837 6801 118 5 6 chr15 33145550 33146785 -70348189 - L1_Mus1 LINE L1 -973 4910 3722 1 837 7033 102 2 2 chr15 33146784 33148449 -70346525 + L1_Mus1 LINE L1 4903 6567 0 1 837 5949 175 19 129 chr15 33148456 33148757 -70346217 + Lx2B LINE L1 4323 4621 -1256 1 837 198 103 0 0 chr15 33148757 33148786 -70346188 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 837 5949 175 19 129 chr15 33148786 33149801 -70345173 + Lx2B LINE L1 4622 5477 -400 1 837 258 32 0 0 chr15 33149801 33149832 -70345142 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 837 5949 165 30 25 chr15 33149832 33151132 -70343842 + Lx2B LINE L1 5478 6998 -2 1 837 1228 48 0 0 chr15 33151996 33152143 -70342831 + B1_Mus1 SINE Alu 2 148 0 1 837 26 30 0 0 chr15 33152143 33152176 -70342798 + AT_rich Low_complexity Low_complexity 1 33 0 1 837 425 122 0 13 chr15 33153423 33153498 -70341476 + (GAAA)n Simple_repeat Simple_repeat 2 75 0 1 837 2195 190 19 29 chr15 33153549 33153966 -70341008 + MTC LTR MaLR 1 413 -8 1 837 3075 203 31 8 chr15 33154288 33154904 -70340070 - Lx5 LINE L1 -185 6865 6236 1 837 3409 145 19 0 chr15 33154942 33155711 -70339263 - Lx5 LINE L1 -993 6057 5272 1 837 274 74 37 0 chr15 33157558 33157612 -70337362 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 1 837 1960 168 35 6 chr15 33157905 33158246 -70336728 + ORR1B1 LTR MaLR 3 353 -41 1 837 3901 175 35 9 chr15 33158252 33159159 -70335815 + Lx4B LINE L1 6033 7003 -47 1 837 398 96 3 0 chr15 33159174 33159248 -70335726 + ORR1B1 LTR MaLR 304 394 0 1 837 216 263 0 81 chr15 33159315 33159377 -70335597 - L2c LINE L2 -5 3382 3326 1 837 1725 264 33 7 chr15 33159385 33159842 -70335132 + RMER1C Other Other 715 1183 -159 1 837 414 0 0 0 chr15 33160780 33160826 -70334148 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 837 369 0 0 0 chr15 33160826 33160866 -70334108 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 837 1316 257 108 44 chr15 33160868 33161090 -70333884 - L1MA8 LINE L1 -56 6235 5997 1 104 708 280 116 94 chr15 33161090 33161461 -70333513 + MTE2a LTR MaLR 1 379 0 1 838 1316 257 108 44 chr15 33161461 33161926 -70333048 - L1MA8 LINE L1 -295 5996 5504 1 838 437 266 30 19 chr15 33163436 33163656 -70331318 + L1VL1 LINE L1 263 485 -5933 1 838 265 269 71 63 chr15 33163663 33163790 -70331184 + L1_Mus1 LINE L1 676 803 -5813 1 838 21342 122 11 11 chr15 33163798 33169721 -70325253 + L1_Mus1 LINE L1 725 6566 -1 1 838 19117 181 35 32 chr15 33169853 33176103 -70318871 - Lx2A LINE L1 -3 7005 764 1 838 21 36 0 0 chr15 33176357 33176385 -70318589 + AT_rich Low_complexity Low_complexity 1 28 0 2 838 9020 13 0 0 chr15 33176521 33178239 -70316735 - L1Md_A LINE L1 0 6582 4865 2 838 268 319 0 0 chr15 33178442 33178514 -70316460 + ID4_ SINE ID 1 72 -11 2 838 221 235 12 0 chr15 33178582 33178667 -70316307 + (TATATG)n Simple_repeat Simple_repeat 6 91 0 2 838 326 91 0 0 chr15 33178673 33178717 -70316257 - HAL1-3A_ME LINE L1 -841 2017 1974 2 838 507 227 0 0 chr15 33178759 33178887 -70316087 + (TA)n Simple_repeat Simple_repeat 2 129 0 2 838 209 72 0 67 chr15 33179031 33179076 -70315898 + (T)n Simple_repeat Simple_repeat 1 42 0 2 838 336 297 11 57 chr15 33181539 33181714 -70313260 + CT-rich Low_complexity Low_complexity 4 170 0 2 838 3292 31 13 0 chr15 33182123 33182514 -70312460 - MTA_Mm LTR MaLR 0 396 1 2 838 280 325 230 65 chr15 33182667 33182897 -70312077 - MLT1J2 LTR MaLR -158 290 23 2 838 5409 110 35 18 chr15 33183421 33184816 -70310158 - L1_Mus3 LINE L1 -240 6398 4997 2 838 338 161 11 0 chr15 33185107 33185200 -70309774 + CT-rich Low_complexity Low_complexity 1 94 0 2 838 236 339 0 0 chr15 33185200 33185265 -70309709 - B4 SINE B4 -6 286 222 2 838 624 314 35 79 chr15 33185378 33185513 -70309461 - B4 SINE B4 -73 219 90 2 838 186 71 0 0 chr15 33185513 33185541 -70309433 + (TTG)n Simple_repeat Simple_repeat 3 30 0 2 838 624 314 35 79 chr15 33185541 33185633 -70309341 - B4 SINE B4 -203 89 2 2 838 322 347 81 0 chr15 33186291 33186415 -70308559 + MER5A DNA MER1_type 20 153 -36 2 838 495 244 46 66 chr15 33187383 33187580 -70307394 - CYRA11_Mm Unknown Y-chromosome -253 364 172 2 838 845 131 27 14 chr15 33187434 33187581 -70307393 + URR1A DNA MER1_type 78 226 0 2 838 253 288 194 0 chr15 33188593 33188780 -70306194 + MIR SINE MIR 2 239 -29 2 838 513 392 11 0 chr15 33188834 33189010 -70305964 - B4 SINE B4 -4 288 111 2 838 650 151 24 39 chr15 33189385 33189580 -70305394 + ORR1B1 LTR MaLR 1 186 -160 2 838 1647 55 18 5 chr15 33189580 33189793 -70305181 + L1_Mm LINE L1 5327 5543 -340 2 838 4620 76 2 16 chr15 33189793 33190408 -70304566 + L1_Mus1 LINE L1 5962 6567 0 2 838 1199 34 0 14 chr15 33190424 33190572 -70304402 + B1_Mus1 SINE Alu 3 148 0 2 838 1182 199 14 0 chr15 33190588 33190809 -70304165 + ORR1A3 LTR MaLR 93 316 -10 2 838 261 314 93 12 chr15 33190965 33191126 -70303848 - Arthur1B DNA Tip100 -3 1222 1049 2 838 592 292 137 70 chr15 33192519 33192861 -70302113 - MLT1A0 LTR MaLR 0 365 1 2 838 363 23 0 0 chr15 33193132 33193176 -70301798 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 838 195 204 0 0 chr15 33194610 33194654 -70300320 + GA-rich Low_complexity Low_complexity 2 45 0 2 838 504 0 0 0 chr15 33194704 33194760 -70300214 + (TC)n Simple_repeat Simple_repeat 1 56 0 2 838 787 295 104 39 chr15 33194869 33195289 -70299685 - MLT2B4 LTR ERVL -95 461 1 2 838 210 315 52 59 chr15 33195571 33195706 -70299268 - L2c LINE L2 -1 3386 3253 2 838 282 29 0 0 chr15 33196925 33196960 -70298014 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 838 8106 38 1 1 chr15 33197058 33198577 -70296397 - L1Md_T LINE L1 -1 6581 5064 2 838 537 157 0 0 chr15 33198864 33198947 -70296027 - Lx7 LINE L1 -714 6982 6900 2 838 321 26 0 0 chr15 33199001 33199039 -70295935 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 2 838 38397 6 0 0 chr15 33199608 33204980 -70289994 + L1Md_A LINE L1 214 5586 -297 2 838 8988 4 0 0 chr15 33204980 33205976 -70288998 + L1Md_A LINE L1 5587 6582 0 2 838 229 26 26 26 chr15 33206691 33206730 -70288244 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 2 838 1610 89 8 8 chr15 33207997 33208236 -70286738 - L1_Mus3 LINE L1 -6 6632 6394 2 838 2196 46 0 0 chr15 33208255 33208518 -70286456 + L1_Mus2 LINE L1 6071 6333 -233 2 838 261 0 0 0 chr15 33211866 33211895 -70283079 + (T)n Simple_repeat Simple_repeat 1 29 0 2 838 216 330 11 11 chr15 33212605 33212697 -70282277 + CT-rich Low_complexity Low_complexity 3 94 0 2 838 652 270 17 38 chr15 33212828 33213064 -70281910 + B3A SINE B2 4 216 0 2 838 775 231 6 31 chr15 33213650 33213811 -70281163 - B3 SINE B2 -6 210 54 2 838 267 345 41 14 chr15 33213881 33214028 -70280946 - MARNA DNA Mariner -41 545 395 2 838 321 359 58 66 chr15 33214108 33214382 -70280592 + MARNA DNA Mariner 313 584 -2 2 838 317 361 52 8 chr15 33214570 33214704 -70280270 + MER5A DNA MER1_type 22 161 -28 2 838 263 283 169 32 chr15 33215201 33215325 -70279649 + MIR SINE MIR 109 249 -13 2 838 504 0 0 0 chr15 33215547 33215603 -70279371 + (GGAA)n Simple_repeat Simple_repeat 2 57 0 2 838 313 231 108 21 chr15 33215622 33215715 -70279259 + PB1 SINE Alu 23 123 -4 2 838 736 30 20 0 chr15 33215719 33215818 -70279156 + (TAGA)n Simple_repeat Simple_repeat 4 104 0 2 838 21 0 0 0 chr15 33216919 33216940 -70278034 + AT_rich Low_complexity Low_complexity 1 21 0 2 838 1030 109 0 33 chr15 33217327 33217479 -70277495 + B1_Mus2 SINE Alu 1 147 0 2 838 189 64 41 41 chr15 33217490 33217539 -70277435 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 2 838 2082 170 32 16 chr15 33218010 33218387 -70276587 - ORR1C2 LTR MaLR -1 383 1 2 838 638 277 118 18 chr15 33218834 33218980 -70275994 + B3 SINE B2 2 166 -50 2 838 198 71 0 0 chr15 33218980 33219008 -70275966 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 838 638 277 118 18 chr15 33219008 33219030 -70275944 + B3 SINE B2 167 187 -29 2 838 488 338 74 5 chr15 33219095 33219297 -70275677 - B4A SINE B4 0 292 77 2 838 19786 118 30 8 chr15 33219301 33222919 -70272055 - L1_Mus2 LINE L1 0 6566 2889 2 838 198 0 0 0 chr15 33222919 33222941 -70272033 + (TTTC)n Simple_repeat Simple_repeat 3 24 0 2 838 17669 133 21 1 chr15 33222941 33224278 -70270696 - L1_Mus2 LINE L1 -2995 2888 1512 2 838 374 227 44 22 chr15 33224280 33224370 -70270604 - B4 SINE B4 -200 92 1 2 838 278 0 54 0 chr15 33224610 33224647 -70270327 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 838 1140 58 0 0 chr15 33224647 33224786 -70270188 - B1_Mus1 SINE Alu -9 139 1 2 838 404 377 37 42 chr15 33225939 33226246 -70268728 - B4 SINE B4 -14 278 2 2 838 1497 152 36 122 chr15 33226358 33226718 -70268256 - ORR1A4 LTR MaLR 0 329 1 2 838 270 0 0 0 chr15 33227316 33227346 -70267628 + (T)n Simple_repeat Simple_repeat 1 30 0 2 838 192 77 0 0 chr15 33227820 33227846 -70267128 + (CTTA)n Simple_repeat Simple_repeat 2 27 0 2 838 5590 116 50 5 chr15 33227846 33228722 -70266252 - Lx3A LINE L1 -13 6968 6053 2 838 1157 292 35 13 chr15 33229392 33229850 -70265124 - L1MB8 LINE L1 -10 6168 5701 2 838 202 302 0 0 chr15 33229938 33229991 -70264983 + (CATA)n Simple_repeat Simple_repeat 1 53 0 2 838 234 183 95 48 chr15 33230003 33230066 -70264908 - MTEb LTR MaLR 0 379 314 2 838 723 258 64 35 chr15 33230301 33230647 -70264327 - L1MB8 LINE L1 -564 5620 5265 2 838 462 351 21 53 chr15 33230985 33231268 -70263706 + B4A SINE B4 1 274 -18 2 838 1153 55 14 0 chr15 33231536 33231681 -70263293 + B1_Mm SINE Alu 1 147 0 2 838 194 0 39 0 chr15 33231688 33231714 -70263260 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 838 32 95 0 0 chr15 33231888 33231983 -70262991 + AT_rich Low_complexity Low_complexity 1 95 0 2 838 283 327 65 20 chr15 33233444 33233597 -70261377 - L1ME2 LINE L1 -55 6124 5965 2 838 344 334 52 6 chr15 33234232 33234429 -70260545 - L1ME2 LINE L1 -2209 5833 5621 2 838 426 270 116 101 chr15 33234505 33234773 -70260201 + B4 SINE B4 4 275 -17 2 838 585 0 0 0 chr15 33234773 33234838 -70260136 + (ATGTG)n Simple_repeat Simple_repeat 1 65 0 2 838 3121 223 54 61 chr15 33236678 33237462 -70257512 - Lx6 LINE L1 -634 6826 6049 2 838 720 89 0 0 chr15 33237602 33237703 -70257271 + (TTTC)n Simple_repeat Simple_repeat 2 102 0 2 838 357 20 0 56 chr15 33237708 33237762 -70257212 - L1Md_F2 LINE L1 -13 6569 6519 2 838 269 286 57 9 chr15 33237771 33237877 -70257097 - MER20 DNA MER1_type -4 215 105 2 838 2001 168 104 0 chr15 33238109 33238484 -70256490 + MTC LTR MaLR 8 421 0 2 838 3486 18 2 0 chr15 33238543 33238938 -70256036 + MTA_Mm LTR MaLR 1 396 0 2 838 9250 32 2 1 chr15 33238938 33240035 -70254939 + MTA_Mm-int LTR MaLR 1 1098 0 2 838 3486 18 2 0 chr15 33240035 33240430 -70254544 + MTA_Mm LTR MaLR 1 396 0 2 838 614 215 76 8 chr15 33240472 33240603 -70254371 + B1_Mur4 SINE Alu 1 140 -10 2 838 189 385 83 15 chr15 33241947 33242079 -70252895 - L2b LINE L2 -205 3170 3030 2 838 240 172 109 0 chr15 33242546 33242610 -70252364 - LTR90A LTR LTR -842 134 64 2 838 186 331 241 25 chr15 33243007 33243165 -70251809 - MIRb SINE MIR -50 218 27 2 838 264 295 0 16 chr15 33243672 33243734 -70251240 + ID_B1 SINE B4 39 99 -125 2 838 701 129 123 1 chr15 33243736 33243869 -70251105 + B2_Mm2 SINE B2 2 159 -57 2 838 227 253 71 60 chr15 33243845 33243929 -70251045 - ORR1C2 LTR MaLR -126 258 174 2 838 455 299 23 8 chr15 33243888 33244016 -70250958 + ID_B1 SINE B4 93 222 -2 2 838 403 353 45 73 chr15 33244189 33244476 -70250498 + MLT1F1 LTR MaLR 15 293 -276 2 838 570 310 27 27 chr15 33245324 33245473 -70249501 + B3A SINE B2 5 153 -45 2 838 225 108 0 0 chr15 33245473 33245510 -70249464 + (CATA)n Simple_repeat Simple_repeat 4 40 0 2 838 292 89 17 35 chr15 33245647 33245705 -70249269 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 2 838 225 279 156 47 chr15 33246225 33246353 -70248621 + RMER4A LTR ERVK 22 163 -303 2 838 409 282 182 0 chr15 33246533 33246703 -70248271 - Lx6 LINE L1 -1 7459 7259 2 838 2745 253 61 7 chr15 33246698 33247766 -70247208 - Lx5 LINE L1 -493 6557 5427 2 838 493 202 7 88 chr15 33247765 33247901 -70247073 - Lx5 LINE L1 -1983 3897 3773 2 838 4862 184 46 20 chr15 33247897 33249004 -70245970 - Lx5 LINE L1 -2291 3589 2454 2 838 2412 189 51 62 chr15 33249006 33249194 -70245780 - Lx5 LINE L1 -3657 2223 2060 2 838 342 0 0 0 chr15 33249194 33249232 -70245742 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 838 2412 189 51 62 chr15 33249232 33249691 -70245283 - Lx5 LINE L1 -3821 2059 1583 2 838 30030 129 6 16 chr15 33249683 33255754 -70239220 - L1_Mus1 LINE L1 -91 6476 441 2 838 3695 99 23 2 chr15 33255750 33256317 -70238657 - MusHAL1 LINE L1 -645 2067 1489 2 838 287 277 115 25 chr15 33256517 33256639 -70238335 - LTR16E2 LTR ERVL -2 566 434 3 838 434 244 0 13 chr15 33256639 33256718 -70238256 + RSINE1 SINE B4 4 81 -84 3 838 195 345 124 20 chr15 33257678 33257879 -70237095 - MIR SINE MIR 0 262 41 3 838 560 205 12 53 chr15 33258098 33258268 -70236706 - RNLTR23 LTR ERVK 0 642 480 3 838 336 64 0 0 chr15 33260724 33260771 -70234203 + (TATG)n Simple_repeat Simple_repeat 4 50 0 3 838 514 324 55 0 chr15 33260782 33260927 -70234047 - RSINE1 SINE B4 -4 161 9 3 838 267 104 0 0 chr15 33260967 33261015 -70233959 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 3 838 7585 29 2 0 chr15 33263314 33264208 -70230766 - L1Md_A LINE L1 0 6582 5687 3 838 2140 186 29 10 chr15 33266086 33266499 -70228475 - MTC LTR MaLR 0 421 1 3 838 315 0 0 0 chr15 33266928 33266963 -70228011 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 838 1099 65 0 0 chr15 33266963 33267101 -70227873 - B1_Mus2 SINE Alu -9 138 1 3 838 3240 140 44 13 chr15 33267211 33267308 -70227666 - Lx3B LINE L1 -3 6970 6854 3 838 273 57 0 0 chr15 33267308 33267343 -70227631 + (CACCC)n Simple_repeat Simple_repeat 5 39 0 3 838 3240 140 44 13 chr15 33267343 33267773 -70227201 - Lx3B LINE L1 -120 6853 6427 3 838 2541 169 37 2 chr15 33267780 33268339 -70226635 + Lx8 LINE L1 3913 4335 -1512 3 838 961 259 104 48 chr15 33268610 33269178 -70225796 - L1MC3 LINE L1 -14 7771 7172 3 838 793 322 62 31 chr15 33270291 33270679 -70224295 + MLT1B LTR MaLR 2 390 0 3 838 362 21 0 21 chr15 33270795 33270843 -70224131 + (TTA)n Simple_repeat Simple_repeat 2 48 0 3 838 498 192 13 6 chr15 33271265 33271422 -70223552 + GA-rich Low_complexity Low_complexity 2 159 0 3 838 30 45 0 0 chr15 33271954 33271998 -70222976 + AT_rich Low_complexity Low_complexity 1 44 0 3 838 330 67 0 0 chr15 33273564 33273609 -70221365 + (TCCA)n Simple_repeat Simple_repeat 1 45 0 3 838 243 330 143 0 chr15 33273703 33273815 -70221159 - LTR16E1 LTR ERVL 0 538 411 3 838 1518 284 124 27 chr15 33273836 33274496 -70220478 + Lx8 LINE L1 6725 7448 -25 3 838 243 78 59 0 chr15 33274497 33274548 -70220426 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 3 838 7175 82 13 8 chr15 33274642 33275740 -70219234 - L1_Mus2 LINE L1 0 6566 5464 3 838 274 401 31 16 chr15 33275755 33275884 -70219090 - LTR16E1 LTR ERVL -202 336 206 3 838 213 65 0 0 chr15 33279004 33279035 -70215939 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 838 272 252 53 30 chr15 33279791 33279922 -70215052 - Lx7 LINE L1 0 7696 7563 3 838 2104 236 34 73 chr15 33279947 33280574 -70214400 - Lx7 LINE L1 -286 7410 6809 3 838 751 274 112 22 chr15 33280596 33280917 -70214057 - Lx7 LINE L1 -1439 6257 5908 3 838 357 267 9 44 chr15 33280918 33281025 -70213949 - B1F SINE Alu -31 118 15 3 838 2597 113 11 5 chr15 33281976 33282357 -70212617 - RLTR9A2 LTR ERVK 0 383 1 3 838 411 292 37 44 chr15 33283610 33283746 -70211228 - B4A SINE B4 -156 136 2 3 838 215 235 12 0 chr15 33285066 33285140 -70209834 + MIRc SINE MIR 55 123 -139 3 838 216 0 0 0 chr15 33286095 33286119 -70208855 + (TA)n Simple_repeat Simple_repeat 1 24 0 3 838 206 258 29 88 chr15 33288215 33288283 -70206691 - MIRm SINE MIR -23 253 190 3 838 405 0 0 0 chr15 33288285 33288330 -70206644 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 838 799 190 14 7 chr15 33288396 33288539 -70206435 - B1_Mur3 SINE Alu 0 149 6 3 838 326 261 16 112 chr15 33288432 33288557 -70206417 - MT2B LTR ERVL -337 264 152 3 838 1247 122 16 0 chr15 33288603 33288791 -70206183 + B2_Mm2 SINE B2 2 192 -3 3 838 189 147 0 0 chr15 33288878 33288912 -70206062 + (TTG)n Simple_repeat Simple_repeat 2 35 0 3 838 4439 229 55 25 chr15 33288915 33289745 -70205229 - Lx6 LINE L1 -9 7451 6591 3 838 2955 61 5 15 chr15 33289745 33290143 -70204831 + MTA_Mm LTR MaLR 3 396 0 3 838 4439 229 55 25 chr15 33290143 33290351 -70204623 - Lx6 LINE L1 -870 6590 6382 3 838 278 319 52 17 chr15 33290412 33290527 -70204447 - LTR33 LTR ERVL 0 515 397 3 838 508 339 71 8 chr15 33291226 33291577 -70203397 - L1ME3B LINE L1 -387 5853 5481 3 839 309 294 41 16 chr15 33294118 33294239 -70200735 - MER5A DNA MER1_type -34 155 32 3 839 214 312 88 0 chr15 33294757 33294837 -70200137 - MIR SINE MIR -109 153 67 3 839 211 28 56 0 chr15 33295353 33295389 -70199585 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 3 839 269 331 63 31 chr15 33300173 33300332 -70194642 - MIRb SINE MIR -6 262 99 3 839 1529 284 62 37 chr15 33300799 33301344 -70193630 - MTEb-int LTR MaLR -1021 559 1 3 839 432 231 185 28 chr15 33301344 33301651 -70193323 - MTEb LTR MaLR 0 379 6 3 839 336 312 24 16 chr15 33301878 33302005 -70192969 - L1MCc LINE L1 -5018 1405 1278 3 839 1523 193 171 0 chr15 33302740 33303061 -70191913 + ORR1C1 LTR MaLR 3 378 0 3 839 17656 105 26 24 chr15 33303081 33306494 -70188480 - L1_Mur1 LINE L1 -2027 3859 5 3 839 216 0 0 0 chr15 33307362 33307386 -70187588 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 3 839 3217 31 3 0 chr15 33307389 33307775 -70187199 - L1Md_T LINE L1 0 6582 6196 3 839 545 299 173 34 chr15 33308600 33309067 -70185907 - L1ME3A LINE L1 -84 6089 5558 3 839 272 118 39 0 chr15 33310026 33310077 -70184897 + RMER6-int LTR ERVK 3125 3177 0 3 839 1911 187 188 41 chr15 33310080 33310839 -70184135 + RMER6C LTR ERVK 4 720 0 3 839 450 0 0 0 chr15 33311035 33311085 -70183889 + (TTA)n Simple_repeat Simple_repeat 2 51 0 3 839 523 266 260 0 chr15 33312064 33312233 -70182741 + ID_B1 SINE B4 10 222 -2 3 839 35 63 0 0 chr15 33312299 33312362 -70182612 + AT_rich Low_complexity Low_complexity 1 63 0 3 839 357 226 198 102 chr15 33312392 33312579 -70182395 - MER20 DNA MER1_type -5 214 10 3 839 309 241 171 43 chr15 33313130 33313247 -70181727 + MIRc SINE MIR 10 141 -127 3 839 557 233 6 104 chr15 33313646 33313729 -70181245 + B1_Mus2 SINE Alu 1 83 -64 3 839 1872 154 21 19 chr15 33313729 33314054 -70180920 + ORR1A2 LTR MaLR 1 326 -1 3 839 557 233 6 104 chr15 33314054 33314133 -70180841 + B1_Mus2 SINE Alu 84 147 0 3 839 514 348 17 39 chr15 33314171 33314401 -70180573 + MIR SINE MIR 28 252 -10 3 839 1112 78 0 0 chr15 33314872 33315014 -70179960 - B1_Mus1 SINE Alu -2 146 5 3 839 216 0 0 0 chr15 33315535 33315559 -70179415 + (A)n Simple_repeat Simple_repeat 1 24 0 3 839 2510 138 65 142 chr15 33315763 33316076 -70178898 - RMER4B LTR ERVK 0 585 327 3 839 1130 95 6 0 chr15 33316076 33316255 -70178719 + (TTC)n Simple_repeat Simple_repeat 1 180 0 3 839 2510 138 65 142 chr15 33316255 33316575 -70178399 - RMER4B LTR ERVK -259 326 1 3 839 29 28 0 0 chr15 33318232 33318268 -70176706 + AT_rich Low_complexity Low_complexity 1 36 0 3 839 21 36 0 0 chr15 33318538 33318566 -70176408 + AT_rich Low_complexity Low_complexity 1 28 0 3 839 231 254 17 0 chr15 33319794 33319853 -70175121 - L2 LINE L2 -560 2859 2800 3 839 207 0 0 0 chr15 33320687 33320710 -70174264 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 839 186 43 0 0 chr15 33320791 33320814 -70174160 + (TAG)n Simple_repeat Simple_repeat 1 23 0 3 839 6175 122 19 13 chr15 33321568 33323065 -70171909 + L1Md_F2 LINE L1 197 1703 -4180 3 839 3107 179 23 5 chr15 33323066 33323668 -70171306 + L1Md_A LINE L1 422 1034 -5690 3 839 16220 72 1 5 chr15 33323695 33325883 -70169091 + L1Md_F3 LINE L1 3407 5586 -297 3 839 7921 41 12 1 chr15 33325883 33326868 -70168106 + L1Md_F3 LINE L1 5587 6582 -2 3 839 27445 86 3 11 chr15 33326868 33330789 -70164185 + L1Md_F2 LINE L1 1695 5586 -297 3 839 6995 78 22 13 chr15 33330789 33331776 -70163198 + L1Md_F2 LINE L1 5587 6582 0 3 839 225 0 0 0 chr15 33332680 33332705 -70162269 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 3 839 1171 75 0 0 chr15 33332919 33333066 -70161908 + B1_Mm SINE Alu 1 147 0 3 839 916 135 0 69 chr15 33333727 33333886 -70161088 - B1_Mus1 SINE Alu 0 148 1 3 839 637 217 34 34 chr15 33333886 33334034 -70160940 - B1_Mur3 SINE Alu 0 149 2 3 839 427 253 17 17 chr15 33334444 33334580 -70160394 + PB1D10 SINE Alu 14 149 0 3 839 24 0 0 0 chr15 33336487 33336511 -70158463 + AT_rich Low_complexity Low_complexity 1 24 0 3 839 368 255 36 56 chr15 33336571 33336766 -70158208 - L1MC3 LINE L1 -119 7666 7476 3 839 1824 209 98 10 chr15 33336759 33337272 -70157702 - Lx7 LINE L1 -112 7584 7027 3 839 4702 160 29 9 chr15 33337386 33338191 -70156783 + RMER13B LTR ERVK 1 821 -87 3 839 1637 273 31 20 chr15 33339210 33339895 -70155079 - Lx6 LINE L1 -26 7434 6460 3 839 561 314 16 44 chr15 33340007 33340190 -70154784 - B3A SINE B2 -16 182 5 3 839 3112 55 0 0 chr15 33343588 33343971 -70151003 + L1_Mus1 LINE L1 6181 6563 -4 3 839 304 365 23 40 chr15 33344198 33344375 -70150599 + MIRc SINE MIR 5 178 -90 3 839 1255 162 13 9 chr15 33344567 33344791 -70150183 - URR1B DNA MER1_type 0 225 1 3 839 22 0 0 0 chr15 33346478 33346500 -70148474 + AT_rich Low_complexity Low_complexity 1 22 0 3 839 260 149 4 0 chr15 33346513 33346568 -70148406 - ORR1B1 LTR MaLR 0 394 312 3 839 228 35 0 0 chr15 33346570 33346599 -70148375 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 839 1125 204 63 15 chr15 33346607 33346941 -70148033 + MYSERV6-int LTR ERVK 4348 4697 -4262 3 839 1212 201 89 16 chr15 33346964 33347243 -70147731 - ORR1B1 LTR MaLR -5 374 85 3 839 1006 194 48 0 chr15 33347248 33347434 -70147540 - RMER19B LTR ERVK -6 896 702 3 839 3112 55 0 0 chr15 33347539 33347922 -70147052 + L1_Mus1 LINE L1 6181 6563 -4 3 839 304 365 23 40 chr15 33348149 33348326 -70146648 + MIRc SINE MIR 5 178 -90 3 839 1255 162 13 9 chr15 33348518 33348742 -70146232 - URR1B DNA MER1_type 0 225 1 3 839 22 0 0 0 chr15 33350429 33350451 -70144523 + AT_rich Low_complexity Low_complexity 1 22 0 3 839 260 149 4 0 chr15 33350464 33350519 -70144455 - ORR1B1 LTR MaLR 0 394 312 3 839 228 35 0 0 chr15 33350521 33350550 -70144424 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 839 1125 204 63 15 chr15 33350558 33350892 -70144082 + MYSERV6-int LTR ERVK 4348 4697 -4262 3 839 25 0 0 0 chr15 33350901 33350926 -70144048 + AT_rich Low_complexity Low_complexity 1 25 0 3 839 1200 201 86 12 chr15 33350937 33351194 -70143780 - ORR1B1 LTR MaLR -34 360 85 3 839 3059 227 120 33 chr15 33351199 33352023 -70142951 - RMER19B LTR ERVK -6 896 1 4 839 331 168 8 4 chr15 33352023 33352084 -70142890 - ORR1B1 LTR MaLR -330 44 3 3 839 278 305 0 35 chr15 33352167 33352252 -70142722 - LTR33B LTR ERVL -1 502 421 4 839 4827 85 26 33 chr15 33353029 33353784 -70141190 + RMER17A LTR ERVK 1 750 -1 4 839 735 167 36 0 chr15 33354259 33354397 -70140577 - URR1B DNA MER1_type 0 225 83 4 839 1967 250 52 9 chr15 33354917 33355437 -70139537 - MTEa-int LTR MaLR -15 1777 1003 4 839 5233 186 16 41 chr15 33355442 33356492 -70138482 - RLTR25B LTR ERVK -4 1024 1 4 839 1358 280 20 70 chr15 33356492 33356885 -70138089 - MTEa-int LTR MaLR -572 1008 636 4 839 1514 301 69 18 chr15 33356885 33357379 -70137595 - MTEa-int LTR MaLR -1061 519 1 4 839 261 227 0 96 chr15 33357380 33357453 -70137521 - MTEa LTR MaLR -1 378 313 4 839 909 165 0 0 chr15 33357492 33357656 -70137318 + GA-rich Low_complexity Low_complexity 3 166 0 4 839 1247 297 6 10 chr15 33357656 33357969 -70137005 - MTEa LTR MaLR -42 337 26 4 839 1840 191 74 39 chr15 33358255 33358686 -70136288 + RLTR41 LTR ERV1 1 446 0 4 839 243 0 0 0 chr15 33360509 33360536 -70134438 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 839 183 80 0 0 chr15 33360549 33360574 -70134400 + (CATA)n Simple_repeat Simple_repeat 2 26 0 4 839 21 82 0 0 chr15 33360761 33360810 -70134164 + AT_rich Low_complexity Low_complexity 1 49 0 4 839 25099 107 19 12 chr15 33360813 33362256 -70132718 - L1_Mus3 LINE L1 -8 6630 5178 4 839 2276 65 54 114 chr15 33362256 33362624 -70132350 - ORR1A1 LTR MaLR 0 346 1 4 839 25099 149 19 13 chr15 33362624 33367397 -70127577 - L1_Mus3 LINE L1 -706 5177 372 4 839 568 27 0 0 chr15 33367431 33367505 -70127469 + L1Md_A LINE L1 6508 6581 -1 4 839 239 342 104 66 chr15 33368064 33368305 -70126669 - MIR SINE MIR -7 255 6 4 839 1225 289 14 4 chr15 33368420 33368698 -70126276 + B4A SINE B4 11 291 -1 4 839 372 43 0 0 chr15 33368712 33368758 -70126216 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 839 1326 260 74 15 chr15 33369698 33370037 -70124937 - MTD LTR MaLR -60 359 1 4 839 705 312 37 9 chr15 33371781 33371998 -70122976 + B4 SINE B4 1 223 -69 4 839 436 288 80 27 chr15 33372008 33372158 -70122816 + RSINE1 SINE B4 2 159 -6 4 839 205 162 0 0 chr15 33372306 33372343 -70122631 + GA-rich Low_complexity Low_complexity 2 38 0 4 839 4343 114 86 1 chr15 33372368 33373053 -70121921 + Lx3A LINE L1 6237 6979 -2 4 839 202 150 25 0 chr15 33373060 33373100 -70121874 + A-rich Low_complexity Low_complexity 1 41 0 4 839 280 343 18 85 chr15 33373247 33373470 -70121504 + MIRb SINE MIR 25 232 -36 4 839 186 71 0 0 chr15 33373711 33373739 -70121235 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 4 839 9588 22 0 0 chr15 33373760 33375605 -70119369 - L1Md_A LINE L1 0 6582 4738 4 839 342 345 53 36 chr15 33376125 33376369 -70118605 + MIR SINE MIR 3 235 -27 4 839 341 336 25 17 chr15 33376380 33376498 -70118476 - MTEa LTR MaLR -15 364 246 4 839 1369 85 0 20 chr15 33376529 33376733 -70118241 + L1_Mus3 LINE L1 6249 6448 -190 4 839 315 321 43 60 chr15 33376733 33376849 -70118125 - MTEa LTR MaLR -258 121 8 4 839 2415 321 115 25 chr15 33376857 33377865 -70117109 - MTEa-int LTR MaLR -2 1578 399 4 839 570 29 0 0 chr15 33377865 33377933 -70117041 + (TC)n Simple_repeat Simple_repeat 2 69 0 4 839 1351 295 44 67 chr15 33377933 33378343 -70116631 - MTEa-int LTR MaLR -1149 431 9 4 839 180 0 0 0 chr15 33378389 33378409 -70116565 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 839 1035 316 67 26 chr15 33378412 33378756 -70116218 - MTEa LTR MaLR -21 358 1 4 839 16865 95 35 6 chr15 33379034 33382276 -70112698 - L1VL4 LINE L1 0 3559 216 4 839 2016 0 0 0 chr15 33382660 33382891 -70112083 + L1_Mm LINE L1 5356 5586 -297 4 839 9060 3 0 0 chr15 33382891 33383887 -70111087 + L1Md_A LINE L1 5587 6582 0 4 839 287 211 0 107 chr15 33384425 33384547 -70110427 - Lx6 LINE L1 -3 7457 7349 4 839 368 266 100 12 chr15 33384535 33384695 -70110279 - Lx6 LINE L1 -6 7454 7281 4 839 25 0 0 0 chr15 33386133 33386158 -70108816 + AT_rich Low_complexity Low_complexity 1 25 0 4 839 224 241 17 0 chr15 33386643 33386701 -70108273 + GA-rich Low_complexity Low_complexity 4 62 0 4 839 364 250 123 43 chr15 33386701 33386839 -70108135 + B1F1 SINE Alu 1 149 0 4 839 733 162 0 0 chr15 33387673 33387790 -70107184 + B1_Mur4 SINE Alu 25 141 -9 4 839 234 0 0 0 chr15 33387790 33387816 -70107158 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 4 839 831 10 0 0 chr15 33387876 33387972 -70107002 + (TATATG)n Simple_repeat Simple_repeat 3 98 0 4 839 4207 80 9 5 chr15 33387988 33388555 -70106419 + Lx3_Mus LINE L1 6436 7004 -5 4 839 342 171 153 0 chr15 33388940 33389051 -70105923 + Lx9 LINE L1 7432 7559 -85 4 839 2159 126 3 0 chr15 33389051 33389377 -70105597 + ORR1A2 LTR MaLR 1 327 0 4 839 467 265 113 12 chr15 33389494 33389662 -70105312 + B3 SINE B2 2 186 -9 4 839 186 43 0 0 chr15 33390497 33390520 -70104454 + (TAAAA)n Simple_repeat Simple_repeat 4 26 0 4 839 371 294 136 9 chr15 33390933 33391043 -70103931 + RSINE1 SINE B4 2 125 -40 4 839 183 156 0 0 chr15 33391044 33391076 -70103898 + CT-rich Low_complexity Low_complexity 2 33 0 4 839 825 56 0 0 chr15 33391081 33391188 -70103786 + (TG)n Simple_repeat Simple_repeat 1 107 0 4 839 31 68 0 0 chr15 33391253 33391312 -70103662 + AT_rich Low_complexity Low_complexity 1 59 0 4 839 480 371 67 27 chr15 33392447 33392852 -70102122 + Lx8 LINE L1 6969 7389 -84 4 839 360 0 0 0 chr15 33392996 33393036 -70101938 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 839 232 175 16 16 chr15 33393069 33393133 -70101841 + CT-rich Low_complexity Low_complexity 3 66 0 4 839 813 209 7 0 chr15 33393167 33393315 -70101659 - B1_Mur3 SINE Alu 0 149 1 4 839 647 268 135 10 chr15 33393337 33393529 -70101445 - B3 SINE B2 0 216 1 4 839 375 266 75 0 chr15 33394058 33394152 -70100822 + B3 SINE B2 97 197 -19 4 839 563 281 71 7 chr15 33394188 33394328 -70100646 + RSINE1 SINE B4 3 151 -14 4 839 213 372 96 6 chr15 33394388 33394545 -70100429 - L2 LINE L2 -566 2853 2683 4 839 1211 165 27 5 chr15 33395293 33395512 -70099462 + URR1B DNA MER1_type 1 224 -1 4 839 535 318 67 34 chr15 33395512 33395784 -70099190 - MER47B DNA MER2_type -123 295 2 4 839 231 36 0 0 chr15 33397179 33397207 -70097767 + (GGA)n Simple_repeat Simple_repeat 1 28 0 4 839 252 86 0 0 chr15 33397212 33397247 -70097727 + (T)n Simple_repeat Simple_repeat 1 35 0 4 839 1130 70 0 0 chr15 33397249 33397392 -70097582 - B1_Mm SINE Alu 0 147 5 4 839 599 293 19 6 chr15 33397403 33397561 -70097413 + B3 SINE B2 50 209 -7 4 839 3875 36 0 0 chr15 33397718 33398188 -70096786 - LTRIS_Mm LTR ERV1 -12 470 1 4 839 21 36 0 0 chr15 33398695 33398723 -70096251 + AT_rich Low_complexity Low_complexity 1 28 0 4 839 1295 178 4 39 chr15 33399711 33399833 -70095141 - MTC LTR MaLR -195 226 106 4 839 1195 48 0 0 chr15 33399833 33399978 -70094996 + B1_Mus1 SINE Alu 2 146 -2 4 839 1295 178 4 39 chr15 33399978 33400089 -70094885 - MTC LTR MaLR -316 105 1 4 839 721 296 70 64 chr15 33400127 33400672 -70094302 - L1ME2 LINE L1 -123 6041 5494 4 839 1069 291 41 20 chr15 33400879 33401220 -70093754 - ORR1E LTR MaLR -4 355 8 4 839 231 173 19 0 chr15 33402517 33402569 -70092405 + RCHARR1 DNA MER1_type 400 452 -522 4 839 743 116 116 7 chr15 33402646 33402793 -70092181 + RCHARR1 DNA MER1_type 338 500 -474 4 839 530 304 167 14 chr15 33402826 33403036 -70091938 - B4A SINE B4 -6 286 45 4 839 272 224 144 58 chr15 33403152 33403256 -70091718 - PB1D9 SINE Alu 0 120 8 4 839 305 176 14 0 chr15 33404059 33404133 -70090841 + (CA)n Simple_repeat Simple_repeat 2 76 0 4 839 609 204 0 0 chr15 33404147 33404309 -70090665 + (CA)n Simple_repeat Simple_repeat 1 162 0 4 839 280 287 29 19 chr15 33405184 33405287 -70089687 - MIRc SINE MIR -135 133 30 4 839 300 27 0 0 chr15 33405589 33405626 -70089348 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 4 839 270 256 302 21 chr15 33407155 33407298 -70087676 + B3 SINE B2 34 216 0 4 839 1004 257 42 49 chr15 33407343 33407728 -70087246 + RMER17C LTR ERVK 29 410 0 4 839 293 328 107 44 chr15 33407864 33408135 -70086839 - Kanga11a DNA Tc2 -682 288 1 4 839 480 282 132 11 chr15 33408696 33408983 -70085991 - Charlie4a DNA MER1_type -83 425 104 4 839 22 0 0 0 chr15 33409936 33409958 -70085016 + AT_rich Low_complexity Low_complexity 1 22 0 4 839 1708 246 32 24 chr15 33410280 33410742 -70084232 - RLTR16 LTR ERVK -39 466 1 4 839 363 247 176 49 chr15 33411020 33411166 -70083808 + MLT1D LTR MaLR 275 442 -63 4 839 201 74 0 0 chr15 33411166 33411193 -70083781 + (TTG)n Simple_repeat Simple_repeat 1 27 0 4 839 363 247 176 49 chr15 33411193 33411213 -70083761 + MLT1D LTR MaLR 443 470 -35 4 839 180 0 0 0 chr15 33411213 33411233 -70083741 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 4 839 5673 47 0 0 chr15 33411235 33411919 -70083055 - L1Md_F2 LINE L1 -19 6563 5880 4 839 363 247 176 49 chr15 33411919 33411952 -70083022 + MLT1D LTR MaLR 471 504 -1 4 839 198 345 25 41 chr15 33412124 33412245 -70082729 - L2 LINE L2 -1230 2189 2071 4 839 184 0 62 31 chr15 33412519 33412551 -70082423 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 4 839 323 333 16 24 chr15 33412760 33412886 -70082088 - MER94 DNA AcHobo -7 127 3 4 839 21 0 0 0 chr15 33413006 33413027 -70081947 + AT_rich Low_complexity Low_complexity 1 21 0 4 839 547 308 14 7 chr15 33413301 33413448 -70081526 - B3 SINE B2 -67 149 2 4 839 338 333 0 39 chr15 33413457 33413560 -70081414 - PB1D10 SINE Alu -4 113 15 4 839 197 232 46 69 chr15 33413725 33413798 -70081176 - L2a LINE L2 -16 3410 3301 4 839 916 270 107 47 chr15 33414252 33414569 -70080405 + MT2B LTR ERVL 3 409 -192 4 839 396 0 0 0 chr15 33414569 33414613 -70080361 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 839 916 247 106 40 chr15 33414613 33414742 -70080232 + MT2B LTR ERVL 410 553 -48 4 839 239 267 11 11 chr15 33414742 33414833 -70080141 + (TA)n Simple_repeat Simple_repeat 1 91 0 4 839 263 109 0 21 chr15 33414848 33414895 -70080079 + MT2A LTR ERVL 488 533 0 4 839 36243 30 0 1 chr15 33416609 33423092 -70071882 - L1Md_T LINE L1 0 6585 60 4 839 183 184 0 0 chr15 33423244 33423282 -70071692 + A-rich Low_complexity Low_complexity 1 38 0 5 840 241 333 142 47 chr15 33424395 33424543 -70070431 + MIRb SINE MIR 84 245 -23 5 840 209 224 32 65 chr15 33424788 33424850 -70070124 - MIRb SINE MIR -195 73 14 5 840 1681 320 97 18 chr15 33425725 33426612 -70068362 - Lx8 LINE L1 -30 7443 6487 5 840 21 0 0 0 chr15 33426690 33426711 -70068263 + AT_rich Low_complexity Low_complexity 1 21 0 5 840 678 267 24 36 chr15 33427611 33427778 -70067196 + RSINE1 SINE B4 1 165 0 5 840 552 181 29 6 chr15 33427808 33427980 -70066994 + (CA)n Simple_repeat Simple_repeat 1 176 0 5 840 269 109 22 0 chr15 33427997 33428043 -70066931 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 840 279 278 85 49 chr15 33429192 33429361 -70065613 - MIRb SINE MIR -2 260 85 5 840 246 176 0 0 chr15 33429695 33429746 -70065228 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 840 633 307 0 18 chr15 33429747 33429913 -70065061 - RSINE1 SINE B4 0 165 3 5 840 226 359 0 37 chr15 33430911 33430992 -70063982 - ID4 SINE ID -4 79 2 5 840 549 167 8 16 chr15 33432689 33432817 -70062157 + (TA)n Simple_repeat Simple_repeat 2 128 0 5 840 2524 167 42 68 chr15 33433600 33434171 -70060803 + RLTR31_Mm LTR ERVK 6 561 0 5 840 381 274 17 42 chr15 33434636 33434754 -70060220 - Tigger5 DNA MER2_type 0 2406 2292 5 840 232 309 58 14 chr15 33435014 33435083 -70059891 - L2c LINE L2 -30 3357 3286 5 840 248 390 0 0 chr15 33435340 33435417 -70059557 + ID4_ SINE ID 3 79 -4 5 840 315 329 83 25 chr15 33435430 33435670 -70059304 - L1MC5 LINE L1 -50 7911 7658 5 840 221 171 22 22 chr15 33435879 33435969 -70059005 + (TA)n Simple_repeat Simple_repeat 1 90 0 5 840 3097 104 39 15 chr15 33436115 33436583 -70058391 + Lx LINE L1 6169 6647 -7 5 840 575 14 14 0 chr15 33436616 33436688 -70058286 + (GGAA)n Simple_repeat Simple_repeat 3 75 0 5 840 532 257 38 92 chr15 33436691 33437086 -70057888 - L1MC5 LINE L1 -916 7045 6706 5 840 1941 153 3 52 chr15 33437507 33437552 -70057422 + ORR1A2 LTR MaLR 1 42 -285 5 840 1138 62 6 30 chr15 33437552 33437718 -70057256 + L1_Mus2 LINE L1 6405 6566 0 5 840 1941 153 3 52 chr15 33437718 33438016 -70056958 + ORR1A2 LTR MaLR 43 327 0 5 840 7443 148 215 9 chr15 33438016 33439643 -70055331 + ORR1A2-int LTR MaLR 1 1963 0 5 840 2163 127 16 3 chr15 33439643 33439966 -70055008 + ORR1A2 LTR MaLR 1 327 0 5 840 3385 33 2 0 chr15 33439993 33440388 -70054586 + MTA_Mm LTR MaLR 1 396 0 5 840 187 326 20 71 chr15 33440451 33440550 -70054424 - MIRc SINE MIR -109 159 66 5 840 293 305 127 13 chr15 33441027 33441217 -70053757 + MIRc SINE MIR 12 218 -44 5 840 284 208 10 0 chr15 33441332 33441428 -70053546 + (TG)n Simple_repeat Simple_repeat 2 98 0 5 840 216 0 0 0 chr15 33441597 33441621 -70053353 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 840 284 303 48 64 chr15 33444118 33444305 -70050669 - RLTR16 LTR ERVK -288 217 34 5 840 183 295 62 25 chr15 33444492 33444572 -70050402 + MER5A DNA MER1_type 57 139 -50 5 840 275 279 29 0 chr15 33444609 33444677 -70050297 + B4A SINE B4 2 71 -221 5 840 1102 95 0 0 chr15 33444716 33444863 -70050111 + B1_Mus1 SINE Alu 2 148 0 5 840 229 167 0 36 chr15 33444863 33444919 -70050055 + A-rich Low_complexity Low_complexity 6 59 0 5 840 335 336 0 62 chr15 33444952 33445082 -70049892 + B4A SINE B4 161 282 -10 5 840 294 206 0 0 chr15 33445121 33445184 -70049790 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 840 405 39 0 0 chr15 33445184 33445235 -70049739 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 840 520 328 78 59 chr15 33446207 33446707 -70048267 - MER90a LTR ERV1 -16 559 65 5 840 342 271 0 0 chr15 33446737 33446855 -70048119 + CT-rich Low_complexity Low_complexity 3 120 0 5 840 582 15 0 0 chr15 33447126 33447193 -70047781 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 840 342 0 0 0 chr15 33447193 33447230 -70047744 + (GA)n Simple_repeat Simple_repeat 1 38 0 5 840 1262 272 42 17 chr15 33447732 33448087 -70046887 - MTEa LTR MaLR 0 379 16 5 840 315 65 0 0 chr15 33449265 33449311 -70045663 + (A)n Simple_repeat Simple_repeat 1 46 0 5 840 330 273 30 0 chr15 33449649 33449814 -70045160 + (CAGCT)n Simple_repeat Simple_repeat 4 173 0 5 840 270 217 0 0 chr15 33450149 33450218 -70044756 + (TATG)n Simple_repeat Simple_repeat 2 70 0 5 840 768 63 0 0 chr15 33450363 33450474 -70044500 - MusHAL1 LINE L1 -57 2655 2545 5 840 3390 105 2 4 chr15 33450482 33450981 -70043993 - L1_Mus1 LINE L1 -159 5724 5225 5 840 6115 57 14 0 chr15 33450981 33451749 -70043225 + L1_Mus1 LINE L1 5789 6567 0 5 840 10259 96 41 1 chr15 33451764 33453357 -70041617 - MusHAL1 LINE L1 -154 2558 902 5 840 909 130 6 38 chr15 33453355 33453515 -70041459 - L1VL2 LINE L1 -6116 219 65 5 840 386 293 426 13 chr15 33453603 33453898 -70041076 + MER47B DNA MER2_type 1 417 -1 5 840 564 65 0 0 chr15 33454399 33454476 -70040498 + (TTTTA)n Simple_repeat Simple_repeat 5 81 0 5 840 799 288 0 0 chr15 33454484 33454647 -70040327 - B3 SINE B2 -42 174 12 5 840 264 149 0 0 chr15 33454790 33454837 -70040137 + (TGGA)n Simple_repeat Simple_repeat 4 50 0 5 840 561 42 0 0 chr15 33454852 33454924 -70040050 + (GA)n Simple_repeat Simple_repeat 1 72 0 5 840 2504 63 39 3 chr15 33456005 33456037 -70038937 - IAPLTR4 LTR ERVK 0 345 312 5 840 279 0 0 0 chr15 33456037 33456068 -70038906 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 840 2504 63 39 3 chr15 33456068 33456368 -70038606 - IAPLTR4 LTR ERVK -34 311 2 5 840 1897 155 50 3 chr15 33456980 33457303 -70037671 + ORR1A1 LTR MaLR 1 338 -8 5 840 22 35 0 0 chr15 33457777 33457806 -70037168 + AT_rich Low_complexity Low_complexity 1 29 0 5 840 387 0 0 0 chr15 33457941 33457984 -70036990 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 5 840 2578 242 105 39 chr15 33457984 33458736 -70036238 + RMER1B Other Other 8 606 -460 5 840 3053 48 45 0 chr15 33458736 33459115 -70035859 + MTA_Mm LTR MaLR 1 396 0 5 840 2578 190 63 45 chr15 33459115 33459582 -70035392 + RMER1B Other Other 607 1062 -4 5 840 506 313 151 26 chr15 33459775 33460080 -70034894 - MLT1J2 LTR MaLR -91 357 15 5 840 1766 215 34 40 chr15 33460159 33460605 -70034369 - RLTR20B3 LTR ERVK -66 511 69 5 840 196 77 25 25 chr15 33460661 33460701 -70034273 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 840 24 32 0 0 chr15 33460870 33460901 -70034073 + AT_rich Low_complexity Low_complexity 1 31 0 5 840 247 339 21 90 chr15 33461350 33461538 -70033436 - MER117 DNA MER1_type -17 180 6 5 840 181 281 52 17 chr15 33462387 33462445 -70032529 + MIR3 SINE MIR 111 170 -38 5 840 460 252 9 0 chr15 33462548 33462655 -70032319 - MLT1D LTR MaLR 0 505 398 5 840 372 43 0 0 chr15 33463092 33463138 -70031836 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 840 2847 295 31 22 chr15 33463159 33464200 -70030774 - Lx9 LINE L1 -203 7441 6392 5 840 35 24 0 0 chr15 33464204 33464246 -70030728 + AT_rich Low_complexity Low_complexity 1 42 0 5 840 253 232 122 44 chr15 33464452 33464542 -70030432 - MLT1D LTR MaLR -367 138 42 5 840 294 356 142 18 chr15 33464873 33465099 -70029875 - LTR16C LTR ERVL -2 487 234 5 840 191 88 0 29 chr15 33465466 33465501 -70029473 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 5 840 217 0 59 59 chr15 33465701 33465752 -70029222 + (TTTG)n Simple_repeat Simple_repeat 4 54 0 5 840 1014 30 53 0 chr15 33465752 33465884 -70029090 - B1_Mm SINE Alu 0 147 9 5 840 639 368 86 34 chr15 33465885 33465952 -70029022 - LTR82A LTR ERVL -66 806 743 5 840 3344 41 5 0 chr15 33465952 33466346 -70028628 - MTA_Mm LTR MaLR 0 396 1 5 840 639 368 86 34 chr15 33466346 33466868 -70028106 - LTR82A LTR ERVL -130 742 186 5 840 531 299 108 54 chr15 33467063 33467526 -70027448 - L1MB3 LINE L1 0 6183 5696 5 840 4531 63 7 2 chr15 33468563 33469139 -70025835 - L1_Mus1 LINE L1 -2 6565 5987 5 840 2086 55 0 0 chr15 33469139 33469414 -70025560 + L1_Mus1 LINE L1 5734 6008 -558 5 840 552 364 24 0 chr15 33469476 33469682 -70025292 + ORR1E LTR MaLR 1 211 -148 5 840 202 294 59 0 chr15 33470017 33470085 -70024889 - MIR SINE MIR -130 132 61 5 840 1124 243 149 40 chr15 33470368 33470456 -70024518 - RLTR20B3 LTR ERVK 0 560 465 5 840 267 79 0 0 chr15 33470456 33470494 -70024480 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 840 1201 223 37 35 chr15 33470494 33470833 -70024141 - RLTR20B3 LTR ERVK -96 464 87 5 840 18580 165 12 30 chr15 33470962 33474291 -70020683 + L1_Mus3 LINE L1 2109 5365 -518 5 840 720 54 0 0 chr15 33474291 33474384 -70020590 + (GAAA)n Simple_repeat Simple_repeat 2 94 0 5 840 18580 108 8 7 chr15 33474384 33475409 -70019565 + L1_Mus3 LINE L1 5366 6399 -239 5 840 7518 127 61 11 chr15 33475414 33476870 -70018104 + Lx2 LINE L1 5457 6984 -13 5 840 646 268 19 19 chr15 33476884 33477040 -70017934 + B3A SINE B2 27 182 -16 5 840 396 0 0 0 chr15 33477088 33477132 -70017842 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 840 395 271 79 53 chr15 33477333 33477487 -70017487 - ORR1E LTR MaLR -236 158 1 5 840 318 277 24 30 chr15 33478253 33478417 -70016557 - L1MA6 LINE L1 -4 6296 6134 5 840 420 305 159 36 chr15 33478752 33479059 -70015915 - L1ME2 LINE L1 -2 6162 5826 5 840 986 103 156 12 chr15 33479059 33479226 -70015748 - B2_Mm2 SINE B2 -4 191 1 5 840 420 305 159 36 chr15 33479226 33479452 -70015522 - L1ME2 LINE L1 -339 5825 5563 5 840 191 383 126 50 chr15 33480923 33481305 -70013669 - L2b LINE L2 -40 3335 2925 5 840 248 239 149 0 chr15 33481320 33481387 -70013587 + Tigger5 DNA MER2_type 40 116 -2290 5 840 604 178 0 22 chr15 33481401 33481539 -70013435 + CT-rich Low_complexity Low_complexity 4 138 0 5 840 238 393 0 0 chr15 33481622 33481734 -70013240 + Tigger5 DNA MER2_type 2291 2402 -4 5 840 246 143 0 0 chr15 33483560 33483609 -70011365 + (T)n Simple_repeat Simple_repeat 1 49 0 5 840 22 0 0 0 chr15 33483712 33483734 -70011240 + AT_rich Low_complexity Low_complexity 1 22 0 5 840 300 347 20 0 chr15 33486195 33486293 -70008681 + MER81 DNA AcHobo 15 114 0 5 840 255 239 2 83 chr15 33488701 33488852 -70006122 - MIRc SINE MIR -67 195 69 5 840 33788 35 0 0 chr15 33489981 33495196 -69999778 + L1Md_F2 LINE L1 278 5589 -297 5 840 6982 53 91 2 chr15 33495196 33496111 -69998863 + L1Md_F2 LINE L1 5590 6585 0 5 840 6855 117 16 9 chr15 33496180 33497250 -69997724 - Lx2 LINE L1 0 6997 5921 5 840 36 23 0 0 chr15 33497680 33497723 -69997251 + AT_rich Low_complexity Low_complexity 1 43 0 5 840 4428 108 93 1 chr15 33497724 33498402 -69996572 - Lx3_Mus LINE L1 -2 7007 6268 5 840 7756 36 1 0 chr15 33498403 33500000 -69994974 - L1Md_F2 LINE L1 0 6582 4984 5 840 868 93 0 0 chr15 33500000 33500118 -69994856 - L1_Mm LINE L1 -900 4983 4866 1 840 11113 70 0 3 chr15 33500117 33501588 -69993386 + L1_Mm LINE L1 3386 4852 -1031 1 840 20976 97 45 45 chr15 33501582 33505586 -69989388 - Lx3_Mus LINE L1 -727 6282 2099 2 840 301 303 55 39 chr15 33505593 33505775 -69989199 + L1_Mur1 LINE L1 226 410 -6572 3 840 669 237 4 87 chr15 33505822 33506053 -69988921 - Lx3_Mus LINE L1 -6770 214 3 2 840 442 269 86 74 chr15 33506117 33506374 -69988600 + L1MEc LINE L1 1905 2164 -4236 4 840 416 342 0 9 chr15 33506418 33506533 -69988441 + PB1D10 SINE Alu 4 117 0 5 840 379 270 11 22 chr15 33506545 33506636 -69988338 + B4 SINE B4 3 92 -200 6 840 304 294 0 0 chr15 33506806 33506874 -69988100 + RSINE1 SINE B4 84 151 -14 7 840 831 194 0 0 chr15 33506879 33507049 -69987925 + L1_Mur1 LINE L1 3108 3277 -2609 8 840 2100 244 28 22 chr15 33507044 33507623 -69987351 + L1VL4 LINE L1 188 769 -5533 9 840 18112 116 8 14 chr15 33507623 33510520 -69984454 + L1_Mus2 LINE L1 1501 4379 -1504 1 840 7226 91 8 1 chr15 33510520 33511863 -69983111 + L1_Mus2 LINE L1 5367 6566 0 1 840 10985 117 8 12 chr15 33511863 33513763 -69981211 + L1VL4 LINE L1 756 2647 -912 9 840 940 144 7 0 chr15 33513775 33513921 -69981053 + B1_Mus1 SINE Alu 2 148 0 1 840 6718 125 21 5 chr15 33513971 33515398 -69979576 + L1_Mus4 LINE L1 5181 6636 0 1 840 3295 118 18 11 chr15 33515398 33515954 -69979020 + L1_Mur1 LINE L1 3263 3822 -2064 1 840 12614 165 59 36 chr15 33515966 33518679 -69976295 - L1_Mur1 LINE L1 -1482 4404 1632 1 840 2443 115 11 8 chr15 33518685 33519063 -69975911 - RLTR11B LTR ERVK -74 379 1 1 840 294 270 32 0 chr15 33519423 33519486 -69975488 - 5S rRNA rRNA -50 71 7 1 840 210 384 200 0 chr15 33519708 33519898 -69975076 + MIRb SINE MIR 29 256 -12 1 840 24 0 0 0 chr15 33520468 33520492 -69974482 + AT_rich Low_complexity Low_complexity 1 24 0 1 840 189 318 132 29 chr15 33521339 33521475 -69973499 - MIRb SINE MIR -77 191 42 1 840 207 0 0 0 chr15 33522440 33522463 -69972511 + (T)n Simple_repeat Simple_repeat 1 23 0 2 840 205 360 135 14 chr15 33523293 33523434 -69971540 - L2b LINE L2 0 3375 3218 2 840 354 98 0 0 chr15 33524476 33524527 -69970447 + (TA)n Simple_repeat Simple_repeat 2 52 0 2 840 375 306 0 44 chr15 33524773 33524794 -69970180 + ID SINE ID 64 79 -145 2 840 455 229 0 50 chr15 33524794 33524895 -69970079 + PB1D10 SINE Alu 1 96 -21 2 840 917 93 49 28 chr15 33525616 33525760 -69969214 + B1_Mus1 SINE Alu 2 148 0 2 840 324 326 78 11 chr15 33526087 33526267 -69968707 + L1MEe LINE L1 137 328 -4526 2 840 221 57 0 28 chr15 33527086 33527122 -69967852 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 840 312 292 0 20 chr15 33527181 33527279 -69967695 + Lx9 LINE L1 7164 7259 -385 2 840 2442 143 35 23 chr15 33527318 33527748 -69967226 - RMER4B LTR ERVK -150 435 1 2 840 517 295 155 12 chr15 33527758 33528081 -69966893 + Lx9 LINE L1 7270 7638 -6 2 840 243 325 35 17 chr15 33529133 33529249 -69965725 - MIR SINE MIR -71 191 74 3 840 348 24 0 0 chr15 33529465 33529506 -69965468 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 840 1054 261 101 59 chr15 33529676 33530270 -69964704 + Zaphod DNA Tip100 311 929 -3102 3 840 372 250 161 15 chr15 33530338 33530468 -69964506 - L1MB2 LINE L1 -188 5995 5847 3 840 410 248 204 24 chr15 33530657 33530868 -69964106 - L1MB2 LINE L1 -329 5842 5594 3 840 359 235 50 29 chr15 33531072 33531220 -69963754 - L1MB2 LINE L1 -594 5586 5435 3 840 3019 140 77 29 chr15 33531248 33531771 -69963203 - Lx2B LINE L1 -5 6995 6448 3 840 2878 171 18 2 chr15 33531780 33532291 -69962683 + Lx LINE L1 6131 6649 -5 3 840 385 233 11 55 chr15 33532315 33532406 -69962568 + PB1D7 SINE Alu 26 112 -8 3 840 12658 50 14 0 chr15 33532416 33534205 -69960769 + L1Md_F2 LINE L1 4246 6063 -519 3 840 318 50 0 0 chr15 33534205 33534245 -69960729 + (GAGAA)n Simple_repeat Simple_repeat 1 40 0 3 840 1329 73 0 0 chr15 33534245 33534422 -69960552 + (GGAGA)n Simple_repeat Simple_repeat 3 180 0 3 840 2607 181 0 47 chr15 33534422 33534482 -69960492 + Lx2 LINE L1 6047 6099 -898 4 840 1358 91 0 5 chr15 33534503 33534691 -69960283 + Lx2 LINE L1 5809 5995 -1002 4 840 755 316 13 31 chr15 33534769 33534994 -69959980 - B4A SINE B4 -5 287 67 4 840 834 115 101 13 chr15 33535124 33535283 -69959691 - URR1A DNA MER1_type -6 220 48 4 840 329 262 43 92 chr15 33535147 33535311 -69959663 + CYRA11_Mm Unknown Y-chromosome 212 367 -250 4 840 1160 243 143 59 chr15 33535312 33535930 -69959044 - L1MB2 LINE L1 -756 5424 4739 3 840 910 201 28 32 chr15 33535930 33536146 -69958828 + B3 SINE B2 2 216 0 4 840 1160 254 156 68 chr15 33536146 33536439 -69958535 - L1MB2 LINE L1 -1408 4738 4428 3 840 38104 43 0 3 chr15 33536438 33542909 -69952065 - L1Md_T LINE L1 0 6585 38 4 840 318 247 178 12 chr15 33542903 33543162 -69951812 - L1MB2 LINE L1 -1699 4447 4136 3 840 302 271 185 8 chr15 33543212 33543331 -69951643 + B1F SINE Alu 1 140 -9 4 840 605 275 67 134 chr15 33543454 33543857 -69951117 + Zaphod DNA Tip100 3594 3969 -62 3 840 1259 199 25 36 chr15 33544204 33544481 -69950493 + RLTR46 LTR ERVK 42 315 -5 4 840 414 0 0 0 chr15 33544624 33544670 -69950304 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 840 240 111 0 0 chr15 33544737 33544773 -69950201 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 840 207 274 112 86 chr15 33544911 33545027 -69949947 - L2a LINE L2 -31 3395 3277 5 840 248 372 37 83 chr15 33545184 33545243 -69949731 + MLT1J LTR MaLR 83 137 -375 5 840 1498 183 27 98 chr15 33545243 33545684 -69949290 + RMER17C LTR ERVK 1 410 0 5 840 248 372 37 83 chr15 33545684 33545841 -69949133 + MLT1J LTR MaLR 138 289 -223 5 840 929 296 98 0 chr15 33546810 33547074 -69947900 - B4A SINE B4 -2 290 1 5 840 464 296 37 149 chr15 33547082 33547324 -69947650 - ID_B1 SINE B4 -7 217 3 5 840 328 306 104 16 chr15 33547652 33547835 -69947139 - MIR SINE MIR 0 262 64 5 840 534 31 0 0 chr15 33548255 33548319 -69946655 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 840 485 248 34 17 chr15 33548319 33548438 -69946536 - B3A SINE B2 -77 121 1 5 840 331 258 99 68 chr15 33548446 33548637 -69946337 - L1ME5 LINE L1 -205 5989 5793 5 840 306 67 0 0 chr15 33549695 33549740 -69945234 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 840 335 304 100 59 chr15 33551508 33551728 -69943246 + MIR SINE MIR 19 247 -15 6 840 477 354 294 45 chr15 33551887 33552207 -69942767 - MLT1A0 LTR MaLR 0 408 9 6 840 321 135 0 0 chr15 33552259 33552311 -69942663 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 840 1678 208 33 46 chr15 33552368 33552757 -69942217 - ORR1C2 LTR MaLR 0 384 1 6 840 4566 226 100 25 chr15 33552757 33554031 -69940943 - ORR1C2-int LTR MaLR 0 1370 2 6 840 1160 224 67 100 chr15 33554032 33554423 -69940551 - ORR1C2 LTR MaLR 0 378 1 6 841 1057 353 95 8 chr15 33554554 33555059 -69939915 - MER77 LTR ERVL 0 607 59 6 841 234 250 55 119 chr15 33555390 33555499 -69939475 - MTC LTR MaLR -55 366 265 6 841 294 338 13 13 chr15 33555648 33555723 -69939251 + B4A SINE B4 40 114 -178 6 841 3593 40 2 0 chr15 33556338 33556733 -69938241 + MTA_Mm LTR MaLR 1 396 0 6 841 342 276 23 0 chr15 33556809 33556896 -69938078 + MLT1H2 LTR MaLR 66 154 -335 6 841 446 221 156 26 chr15 33557164 33557336 -69937638 - MTD LTR MaLR -13 406 234 7 841 21 0 0 0 chr15 33557482 33557503 -69937471 + AT_rich Low_complexity Low_complexity 1 21 0 7 841 220 195 0 0 chr15 33557503 33557544 -69937430 + A-rich Low_complexity Low_complexity 5 45 0 7 841 500 330 130 0 chr15 33557579 33557779 -69937195 + B4 SINE B4 65 290 -2 7 841 507 343 86 15 chr15 33558417 33558686 -69936288 + B4A SINE B4 3 290 -2 7 841 243 88 0 0 chr15 33558739 33558773 -69936201 + (CATA)n Simple_repeat Simple_repeat 4 37 0 7 841 183 185 121 15 chr15 33559349 33559415 -69935559 + L3 LINE CR1 2978 3050 -1439 7 841 5840 133 66 44 chr15 33559671 33561054 -69933920 - L1_Mus2 LINE L1 -1 6996 5528 7 841 552 15 0 0 chr15 33562859 33562924 -69932050 + (CA)n Simple_repeat Simple_repeat 1 65 0 7 841 180 0 0 0 chr15 33563103 33563123 -69931851 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 7 841 2443 134 17 43 chr15 33563210 33563630 -69931344 + RLTR9E LTR ERVK 1 409 0 8 841 180 307 10 111 chr15 33564054 33564153 -69930821 - MIRc SINE MIR -156 112 24 8 841 243 0 0 0 chr15 33564156 33564183 -69930791 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 841 378 0 0 0 chr15 33564201 33564243 -69930731 + (TA)n Simple_repeat Simple_repeat 2 43 0 8 841 192 97 0 0 chr15 33564249 33564280 -69930694 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 8 841 245 299 33 33 chr15 33564723 33564813 -69930161 - MER117 DNA MER1_type -99 98 9 8 841 669 242 27 164 chr15 33565292 33565663 -69929311 - RLTR46 LTR ERVK 0 320 1 8 841 242 121 61 0 chr15 33565833 33565899 -69929075 + CT-rich Low_complexity Low_complexity 2 71 0 8 841 717 147 0 17 chr15 33567804 33567922 -69927052 + RMER17D2 LTR ERVK 1 116 -693 8 841 3010 203 60 29 chr15 33567959 33568759 -69926215 - L1Md_F LINE L1 -5411 1203 385 8 841 220 336 52 43 chr15 33568821 33568936 -69926038 - MIRc SINE MIR -150 118 3 9 841 7709 86 6 9 chr15 33569394 33571145 -69923829 + L1_Mus1 LINE L1 4821 6567 0 9 841 21 0 0 0 chr15 33571145 33571166 -69923808 + AT_rich Low_complexity Low_complexity 1 21 0 9 841 603 321 33 0 chr15 33572110 33572294 -69922680 + B4 SINE B4 7 196 -96 9 841 2391 320 97 49 chr15 33576030 33577234 -69917740 + MTE-int LTR MaLR 317 1578 -2 9 841 198 0 0 0 chr15 33577597 33577619 -69917355 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 9 841 390 270 177 73 chr15 33577822 33577986 -69916988 + ORR1D2 LTR MaLR 1 181 -193 9 841 603 159 23 0 chr15 33577986 33578118 -69916856 + CT-rich Low_complexity Low_complexity 2 136 0 9 841 581 60 24 0 chr15 33578118 33578201 -69916773 + (TCC)n Simple_repeat Simple_repeat 3 87 0 9 841 362 266 61 30 chr15 33578201 33578333 -69916641 + ORR1D2 LTR MaLR 149 284 -86 9 841 2572 236 102 78 chr15 33578363 33579154 -69915820 - RMER13A LTR ERVK 0 860 51 9 841 1022 233 0 71 chr15 33579830 33580084 -69914890 + ORR1C2 LTR MaLR 21 256 -128 1 841 369 152 0 0 chr15 33580084 33580143 -69914831 + Lx3B LINE L1 6915 6973 0 1 841 485 327 112 59 chr15 33582968 33583347 -69911627 - MLT1G3 LTR MaLR -114 434 77 1 841 205 167 0 0 chr15 33583455 33583491 -69911483 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 841 250 314 55 49 chr15 33583603 33583767 -69911207 + ALINE LINE RTE 109 273 -344 1 841 193 263 0 0 chr15 33584048 33584086 -69910888 + L3 LINE CR1 3662 3699 -790 1 841 298 306 9 69 chr15 33584182 33584298 -69910676 - MLT1B LTR MaLR -8 382 274 1 841 1303 0 12 18 chr15 33585306 33585476 -69909498 + (TTCTC)n Simple_repeat Simple_repeat 5 173 0 1 841 22 0 0 0 chr15 33585701 33585723 -69909251 + AT_rich Low_complexity Low_complexity 1 22 0 1 841 184 222 0 43 chr15 33585725 33585772 -69909202 - L4 LINE RTE -1764 265 221 1 841 186 103 0 0 chr15 33585804 33585833 -69909141 + (TTG)n Simple_repeat Simple_repeat 1 29 0 1 841 413 309 0 10 chr15 33585842 33585940 -69909034 - B1_Mur3 SINE Alu -52 97 1 1 841 270 208 46 46 chr15 33587233 33587364 -69907610 + RMER17D LTR ERVK 236 366 -523 1 841 477 278 9 0 chr15 33587949 33588057 -69906917 + PB1D7 SINE Alu 5 113 -7 1 841 279 187 105 13 chr15 33588429 33588505 -69906469 - MTE2b LTR MaLR -18 361 279 1 841 2571 101 63 68 chr15 33588767 33589180 -69905794 - IAPLTR2a LTR ERVK 0 411 1 1 841 6388 30 4 12 chr15 33589182 33589932 -69905042 - IAPEz-int LTR ERVK -2 6479 5736 1 841 2183 76 0 4 chr15 33589931 33590210 -69904764 - IAPEz-int LTR ERVK -4845 1636 1359 1 841 3849 71 2 18 chr15 33590210 33590713 -69904261 - IAPEz-int LTR ERVK -5819 662 168 1 841 250 302 0 0 chr15 33590713 33590766 -69904208 - RLTR27 LTR ERVK -34 275 223 1 841 953 118 22 73 chr15 33590766 33590979 -69903995 - IAPEz-int LTR ERVK -6286 195 3 1 841 2560 127 116 14 chr15 33590981 33591412 -69903562 - IAPLTR2a LTR ERVK 0 475 1 1 841 190 300 0 0 chr15 33591486 33591546 -69903428 - MIRb SINE MIR -23 245 186 1 841 2209 111 8 109 chr15 33592460 33592826 -69902148 - ORR1A4 LTR MaLR 0 329 1 1 841 1360 93 11 21 chr15 33593804 33593991 -69900983 + B2_Mm1t SINE B2 2 186 -7 1 841 1142 96 7 0 chr15 33595352 33595498 -69899476 - B1_Mus1 SINE Alu 0 148 2 1 841 221 313 72 0 chr15 33596104 33596187 -69898787 + MIRb SINE MIR 44 132 -136 1 841 1070 200 2 91 chr15 33596287 33596538 -69898436 + ORR1C1 LTR MaLR 1 230 -144 1 841 282 317 55 55 chr15 33596864 33597081 -69897893 - MIRb SINE MIR -16 252 36 1 841 264 352 0 0 chr15 33597395 33597483 -69897491 + MLT1J LTR MaLR 418 505 -7 1 841 1273 209 82 70 chr15 33597536 33597938 -69897036 + RMER17C LTR ERVK 1 407 -3 1 841 255 174 0 0 chr15 33598212 33598272 -69896702 + CT-rich Low_complexity Low_complexity 11 70 0 1 841 546 16 0 0 chr15 33598272 33598335 -69896639 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 841 473 256 112 25 chr15 33598348 33598544 -69896430 + RMER17C-int LTR ERVK 274 486 -2752 1 841 389 345 0 24 chr15 33598549 33598718 -69896256 + RodERV21-int LTR ERV1 755 919 -4072 1 841 183 42 0 0 chr15 33598718 33598742 -69896232 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 841 6475 148 30 48 chr15 33599229 33600446 -69894528 + RMER17C-int LTR ERVK 1093 2287 -951 1 841 2917 44 0 3 chr15 33600459 33600798 -69894176 - L1_Mus1 LINE L1 -1 6566 6229 1 841 34 0 0 0 chr15 33600992 33601026 -69893948 + AT_rich Low_complexity Low_complexity 1 34 0 1 841 5909 103 4 0 chr15 33601398 33602214 -69892760 - L1_Mm LINE L1 -365 5518 4700 1 841 254 182 0 0 chr15 33603317 33603372 -69891602 + A-rich Low_complexity Low_complexity 1 55 0 1 841 253 258 67 76 chr15 33603416 33603521 -69891453 - B3 SINE B2 -3 213 110 1 841 788 284 73 136 chr15 33603656 33604215 -69890759 - Lx8 LINE L1 -4 7469 6946 1 841 249 108 0 0 chr15 33604241 33604278 -69890696 + (T)n Simple_repeat Simple_repeat 1 37 0 1 841 1228 61 0 13 chr15 33604278 33604427 -69890547 - B1_Mus1 SINE Alu 0 148 2 1 841 789 309 28 16 chr15 33604906 33605159 -69889815 + MER2 DNA MER2_type 88 343 -2 1 841 501 311 23 47 chr15 33605594 33605766 -69889208 + MLT1K LTR MaLR 4 171 -424 1 841 459 0 0 0 chr15 33605822 33605873 -69889101 + (TC)n Simple_repeat Simple_repeat 1 51 0 1 841 441 0 0 0 chr15 33605874 33605923 -69889051 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 841 189 364 0 15 chr15 33606048 33606115 -69888859 + MIRc SINE MIR 20 85 -183 1 841 13654 95 19 8 chr15 33606731 33608021 -69886953 + L1VL4 LINE L1 217 1552 -2007 1 841 2813 53 11 26 chr15 33608021 33608372 -69886602 + ORR1A1 LTR MaLR 1 346 0 1 841 13654 79 22 13 chr15 33608372 33608547 -69886427 + L1VL4 LINE L1 1553 1729 -1830 1 841 228 35 0 0 chr15 33608547 33608576 -69886398 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 841 13654 79 22 13 chr15 33608576 33609697 -69885277 + L1VL4 LINE L1 1730 2833 -726 1 841 609 166 7 14 chr15 33609698 33609845 -69885129 + CT-rich Low_complexity Low_complexity 3 148 0 1 841 662 260 199 29 chr15 33609896 33610177 -69884797 + MTC LTR MaLR 38 366 -55 1 841 1748 186 36 57 chr15 33610211 33610632 -69884342 + RLTR19-int LTR ERVK 1670 2081 -4056 1 841 210 91 0 0 chr15 33610938 33610971 -69884003 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 841 637 258 79 3 chr15 33611023 33611254 -69883720 + Lx8 LINE L1 5634 5905 -1568 1 841 577 283 12 25 chr15 33611497 33611660 -69883314 + RSINE1 SINE B4 5 165 0 1 841 225 336 95 45 chr15 33611675 33611896 -69883078 + Charlie8 DNA MER1_type 71 302 -2126 1 841 728 216 181 16 chr15 33612234 33612544 -69882430 + MLT1B LTR MaLR 30 390 0 1 841 401 245 118 0 chr15 33612769 33612871 -69882103 - RSINE1 SINE B4 -50 115 2 1 841 271 294 32 11 chr15 33613073 33613166 -69881808 - MER5B DNA MER1_type -82 96 2 1 841 197 176 0 0 chr15 33613416 33613450 -69881524 - L3 LINE CR1 -250 4239 4206 1 841 21 0 0 0 chr15 33613638 33613659 -69881315 + AT_rich Low_complexity Low_complexity 1 21 0 1 841 195 42 0 0 chr15 33614406 33614430 -69880544 + (A)n Simple_repeat Simple_repeat 1 24 0 1 841 234 319 0 55 chr15 33618164 33618237 -69876737 + ID4 SINE ID 2 70 -13 1 841 4292 93 30 16 chr15 33618946 33619568 -69875406 - L1_Mus4 LINE L1 -1 6635 6005 1 841 405 0 0 0 chr15 33620008 33620053 -69874921 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 841 252 0 0 0 chr15 33620267 33620295 -69874679 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 1 841 258 256 112 0 chr15 33620366 33620466 -69874508 + L2a LINE L2 3259 3370 -56 1 841 473 275 8 0 chr15 33621484 33621615 -69873359 - MIR SINE MIR -60 202 71 1 841 4526 64 17 12 chr15 33621664 33622252 -69872722 - L1_Mus1 LINE L1 0 6567 5977 1 841 221 163 20 0 chr15 33623439 33623488 -69871486 + (CATATA)n Simple_repeat Simple_repeat 6 55 0 1 841 300 161 71 0 chr15 33623522 33623558 -69871416 - HAL1-3A_ME LINE L1 -824 2034 1995 1 841 2551 152 29 10 chr15 33623558 33623971 -69871003 + MTC LTR MaLR 1 421 0 1 841 300 161 71 0 chr15 33623971 33623990 -69870984 - HAL1-3A_ME LINE L1 -864 1994 1976 1 841 21 0 0 0 chr15 33624897 33624918 -69870056 + AT_rich Low_complexity Low_complexity 1 21 0 1 841 246 268 18 0 chr15 33625337 33625393 -69869581 - ID4_ SINE ID -25 58 2 1 841 491 297 20 46 chr15 33625399 33625551 -69869423 - B1F SINE Alu 0 149 2 1 841 2656 70 6 0 chr15 33625587 33625930 -69869044 - L1_Mus1 LINE L1 0 6567 6223 1 841 1011 271 119 26 chr15 33626259 33626569 -69868405 + ORR1D1 LTR MaLR 36 374 0 1 841 1198 68 0 0 chr15 33628549 33628697 -69866277 - B1_Mus1 SINE Alu 0 148 1 1 841 231 100 16 48 chr15 33629943 33630006 -69864968 + (TAAA)n Simple_repeat Simple_repeat 1 61 0 1 841 219 162 0 0 chr15 33630010 33630047 -69864927 + A-rich Low_complexity Low_complexity 1 37 0 1 841 348 191 36 18 chr15 33632871 33632983 -69861991 + GA-rich Low_complexity Low_complexity 1 114 0 1 841 254 174 29 0 chr15 33632968 33633037 -69861937 + (CAGA)n Simple_repeat Simple_repeat 2 72 0 1 841 231 286 157 0 chr15 33633701 33633771 -69861203 + ID4_ SINE ID 3 83 0 1 841 574 248 19 6 chr15 33633998 33634156 -69860818 + L1Md_F LINE L1 578 737 -5782 1 841 26482 136 30 6 chr15 33634195 33636345 -69858629 + L1_Mus2 LINE L1 667 2872 -3011 1 841 1292 72 0 11 chr15 33636345 33636527 -69858447 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 841 26482 131 20 4 chr15 33636527 33638367 -69856607 + L1_Mus2 LINE L1 2873 4732 -1151 1 841 180 0 0 0 chr15 33638367 33638387 -69856587 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 841 26482 103 11 2 chr15 33638387 33639978 -69854996 + L1_Mus2 LINE L1 4733 6348 -218 1 841 1475 39 0 0 chr15 33639969 33640151 -69854823 + L1Md_T LINE L1 5405 5586 -297 1 841 9018 6 0 0 chr15 33640151 33641186 -69853788 + L1Md_T LINE L1 5587 6582 0 1 841 258 341 110 0 chr15 33641186 33641277 -69853697 - B4 SINE B4 -183 109 9 1 841 645 246 101 0 chr15 33641288 33641536 -69853438 - L1M2 LINE L1 -1510 4633 4361 1 841 437 56 0 0 chr15 33641569 33641623 -69853351 + RLTR10B LTR ERVK 239 292 0 1 841 1856 61 26 11 chr15 33641623 33641969 -69853005 + MMERVK10C-int LTR ERVK 1 276 -7305 1 841 976 32 24 0 chr15 33641959 33642083 -69852891 + MMERVK10C-int LTR ERVK 5440 5566 -2015 1 841 1807 64 0 0 chr15 33642083 33642318 -69852656 + MMERVK10C-int LTR ERVK 7347 7581 0 1 841 2213 19 114 0 chr15 33642318 33642580 -69852394 + RLTR10B LTR ERVK 1 292 0 1 841 565 272 114 2 chr15 33642589 33642887 -69852087 - L1M2 LINE L1 -1582 4298 3989 1 841 612 270 61 17 chr15 33642925 33643106 -69851868 - MTD LTR MaLR -5 414 226 1 841 279 217 121 0 chr15 33643311 33643394 -69851580 + PB1D10 SINE Alu 23 115 -2 1 841 15838 162 137 9 chr15 33643768 33648228 -69846746 + L1VL4 LINE L1 536 5587 -299 1 841 189 362 135 45 chr15 33648576 33648732 -69846242 - MIR3 SINE MIR -3 205 36 1 841 1870 45 0 0 chr15 33649836 33650081 -69844893 - L1Md_F2 LINE L1 -1423 4460 4216 1 841 8611 57 0 0 chr15 33650077 33651199 -69843775 + L1Md_F2 LINE L1 4464 5585 -298 1 841 8023 49 4 0 chr15 33651200 33652180 -69842794 + L1Md_F2 LINE L1 5587 6570 -12 1 841 341 287 117 3 chr15 33652396 33652704 -69842270 + L1MEg LINE L1 699 1041 -5043 1 841 426 65 0 0 chr15 33652724 33652786 -69842188 + (TTGG)n Simple_repeat Simple_repeat 2 63 0 1 841 1180 68 0 0 chr15 33652809 33652955 -69842019 - B1_Mus1 SINE Alu -1 147 2 1 841 272 258 0 29 chr15 33652991 33653059 -69841915 + RSINE1 SINE B4 9 74 -91 1 841 7737 108 48 42 chr15 33653059 33654396 -69840578 + Lx3B LINE L1 5626 6970 -3 1 841 873 292 43 30 chr15 33654596 33655065 -69839909 - L1MA4 LINE L1 -395 5905 5431 1 841 1578 304 22 16 chr15 33655120 33655411 -69839563 - L1_Mur3 LINE L1 -1911 3969 3675 1 841 2694 67 12 0 chr15 33655411 33655470 -69839504 - ORR1A1 LTR MaLR 0 346 288 2 841 210 37 0 0 chr15 33655470 33655497 -69839477 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 841 2694 67 12 0 chr15 33655497 33655779 -69839195 - ORR1A1 LTR MaLR -59 287 2 2 841 1578 304 22 16 chr15 33655779 33656307 -69838667 - L1_Mur3 LINE L1 -2206 3674 3146 1 841 987 235 74 61 chr15 33656416 33656779 -69838195 - RLTR9A LTR ERVK 0 368 1 2 841 5649 184 62 4 chr15 33656964 33658573 -69836401 - Lx2B LINE L1 0 7000 5283 2 841 7223 97 16 19 chr15 33658598 33660500 -69834474 - L1_Mus2 LINE L1 0 6566 4668 2 841 11790 35 0 0 chr15 33660510 33662665 -69832309 - L1Md_A LINE L1 -1 6581 4427 2 841 36953 27 1 6 chr15 33662696 33668582 -69826392 - L1Md_T LINE L1 -12 6570 720 2 841 189 0 0 0 chr15 33668582 33668603 -69826371 + (T)n Simple_repeat Simple_repeat 1 21 0 2 841 36247 31 1 0 chr15 33668629 33675513 -69819461 - L1Md_T LINE L1 0 6585 1 2 841 585 65 0 11 chr15 33675509 33675602 -69819372 - L1Md_A LINE L1 -5990 734 643 2 841 20106 140 16 16 chr15 33675603 33679893 -69815081 - L1_Mus2 LINE L1 -1208 4675 383 2 841 227 323 0 30 chr15 33679910 33679977 -69814997 + MLT1N2 LTR MaLR 494 558 -4 2 841 664 313 73 39 chr15 33680055 33680438 -69814536 - LTR37B LTR ERV1 0 468 73 2 841 242 253 146 22 chr15 33680444 33680533 -69814441 - MER5A DNA MER1_type -46 143 44 2 841 259 238 63 0 chr15 33680572 33680635 -69814339 - LTR37B LTR ERV1 -399 69 3 2 841 297 225 34 0 chr15 33680891 33680980 -69813994 - L1MEc LINE L1 -5247 1153 1062 2 841 189 302 27 50 chr15 33681507 33681580 -69813394 + MIRb SINE MIR 194 261 -1 2 841 510 17 0 0 chr15 33681934 33681993 -69812981 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 841 1050 175 14 45 chr15 33682715 33682820 -69812154 + URR1B DNA MER1_type 2 99 -126 2 841 4125 82 26 10 chr15 33682820 33683396 -69811578 + L1_Mus3 LINE L1 6047 6631 -7 2 841 1050 175 14 45 chr15 33683396 33683511 -69811463 + URR1B DNA MER1_type 100 214 -11 2 841 843 102 47 0 chr15 33684852 33684980 -69809994 - URR1B DNA MER1_type 0 225 92 2 105 2713 175 20 39 chr15 33684980 33685592 -69809382 - L1_Mm LINE L1 -801 5082 4483 2 842 6315 133 10 3 chr15 33685562 33687066 -69807908 + Lx LINE L1 5026 6541 -113 2 842 806 145 0 8 chr15 33687618 33687743 -69807231 - ORR1A2 LTR MaLR -82 245 122 2 842 2234 222 54 65 chr15 33687737 33688310 -69806664 - RMER19C LTR ERVK -44 567 1 2 842 307 300 87 2 chr15 33689174 33689321 -69805653 - MIRc SINE MIR -7 255 107 2 842 4704 192 68 49 chr15 33689465 33690549 -69804425 + RLTR21 LTR ERVK 3 1107 -465 2 842 269 87 0 0 chr15 33690671 33690717 -69804257 + RLTR21 LTR ERVK 719 764 -808 2 842 358 113 97 0 chr15 33690837 33690899 -69804075 - ORR1C1 LTR MaLR -9 369 302 2 842 1567 171 105 47 chr15 33690904 33691247 -69803727 + ORR1B2 LTR MaLR 5 367 0 2 842 585 0 0 0 chr15 33692134 33692199 -69802775 + (GAAA)n Simple_repeat Simple_repeat 4 68 0 2 842 1133 96 0 0 chr15 33692200 33692346 -69802628 + B1_Mus1 SINE Alu 1 146 -2 2 842 683 294 144 103 chr15 33692360 33692538 -69802436 - MLT1F2 LTR MaLR -9 551 339 2 842 3351 38 5 0 chr15 33692538 33692932 -69802042 - MTA_Mm LTR MaLR 0 396 1 2 842 8823 56 3 0 chr15 33692932 33694027 -69800947 - MTA_Mm-int LTR MaLR 0 1098 1 2 842 3182 24 48 0 chr15 33694027 33694403 -69800571 - MTA_Mm LTR MaLR 0 396 3 2 842 683 294 144 103 chr15 33694403 33694582 -69800392 - MLT1F2 LTR MaLR -222 338 179 2 842 261 0 0 0 chr15 33695254 33695283 -69799691 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 842 279 0 0 0 chr15 33695283 33695313 -69799661 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 842 377 335 126 23 chr15 33695561 33695824 -69799150 + L2 LINE L2 2729 3018 -401 2 842 835 159 36 12 chr15 33695891 33696056 -69798918 - Lx7 LINE L1 -8 7688 7520 2 842 712 219 36 0 chr15 33696058 33696195 -69798779 + MTE-int LTR MaLR 59 200 -1380 2 842 586 314 58 13 chr15 33696614 33696769 -69798205 + RSINE1 SINE B4 4 165 0 2 842 907 218 30 57 chr15 33696780 33697019 -69797955 + ORR1D1 LTR MaLR 1 228 -139 2 842 570 209 149 11 chr15 33697115 33697267 -69797707 + ORR1D1 LTR MaLR 211 379 0 2 842 4881 98 101 5 chr15 33697560 33698301 -69796673 + L1_Mus3 LINE L1 5824 6635 -3 2 842 644 236 52 46 chr15 33698697 33698870 -69796104 + MTE-int LTR MaLR 789 962 -618 2 842 4043 173 55 9 chr15 33698942 33699759 -69795215 - Lx2 LINE L1 0 5883 5029 2 842 1310 171 27 40 chr15 33699767 33700099 -69794875 + Lx2 LINE L1 5896 6206 -791 2 842 987 93 26 26 chr15 33700349 33700504 -69794470 + B2_Mm2 SINE B2 36 190 -5 2 842 414 100 0 0 chr15 33700627 33700687 -69794287 + (TTTC)n Simple_repeat Simple_repeat 3 62 0 2 842 1320 226 116 35 chr15 33700687 33701058 -69793916 + MTC LTR MaLR 13 413 -8 2 842 451 322 98 25 chr15 33701062 33701336 -69793638 + L1M4c LINE L1 200 493 -5891 2 842 1751 221 134 31 chr15 33701361 33701874 -69793100 - Lx7 LINE L1 -1113 6583 6018 2 842 765 301 67 72 chr15 33701895 33702311 -69792663 + BGLII_B LTR ERVK 1 414 -27 2 842 1899 203 58 7 chr15 33702336 33702752 -69792222 + Lx7 LINE L1 6616 7052 -644 2 842 8520 109 29 10 chr15 33702747 33704819 -69790155 + L1_Mus3 LINE L1 4510 6622 -16 2 842 279 93 0 0 chr15 33704819 33704862 -69790112 + (TAA)n Simple_repeat Simple_repeat 1 43 0 2 842 1189 224 126 39 chr15 33704911 33705145 -69789829 + Lx6 LINE L1 7033 7298 -162 2 842 234 0 0 0 chr15 33705145 33705171 -69789803 + (TTATA)n Simple_repeat Simple_repeat 1 26 0 2 842 1189 224 126 39 chr15 33705171 33705326 -69789648 + Lx6 LINE L1 7299 7455 -5 2 842 442 256 120 107 chr15 33705393 33705512 -69789462 + L1M4c LINE L1 608 732 -5652 2 842 1692 192 83 25 chr15 33705512 33705875 -69789099 + ORR1C2 LTR MaLR 1 384 0 2 842 442 256 120 107 chr15 33705875 33706270 -69788704 + L1M4c LINE L1 733 1129 -5255 2 842 494 274 32 41 chr15 33706270 33706491 -69788483 + L1MB2 LINE L1 5714 5932 -239 2 842 11730 122 54 34 chr15 33706515 33708471 -69786503 + L1VL4 LINE L1 256 2216 -1343 2 842 2710 72 61 5 chr15 33708471 33708846 -69786128 + MTA_Mm LTR MaLR 1 396 0 2 842 11730 98 58 30 chr15 33708846 33709651 -69785323 + L1VL4 LINE L1 2217 3064 -495 2 842 812 226 0 0 chr15 33709651 33709810 -69785164 - RLTR16 LTR ERVK -346 159 1 2 842 1126 274 198 11 chr15 33709832 33710081 -69784893 - Lx5 LINE L1 -386 7074 6736 2 842 459 0 0 0 chr15 33710081 33710132 -69784842 + (TTTTA)n Simple_repeat Simple_repeat 5 55 0 2 842 1177 288 106 8 chr15 33710132 33710583 -69784391 - Lx5 LINE L1 -725 6735 6064 2 842 1662 209 37 40 chr15 33710602 33711031 -69783943 - Lx5 LINE L1 -12 5865 5438 2 842 32815 54 29 2 chr15 33711057 33716379 -69778595 - L1Md_F3 LINE L1 -14 6570 1119 2 842 3389 48 35 2 chr15 33716379 33716801 -69778173 + RLTR10C LTR ERVK 1 436 0 2 842 4329 143 14 11 chr15 33716801 33717532 -69777442 - L1Md_F3 LINE L1 -5579 1145 406 2 842 5150 194 56 17 chr15 33717542 33718631 -69776343 - Lx5 LINE L1 -450 5430 4281 2 842 221 0 35 0 chr15 33718631 33718660 -69776314 + (GTTTG)n Simple_repeat Simple_repeat 2 31 0 2 842 5150 194 56 17 chr15 33718660 33718672 -69776302 - Lx5 LINE L1 -1600 4280 4279 2 842 272 70 23 0 chr15 33718672 33718715 -69776259 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 2 842 5150 194 56 17 chr15 33718715 33718863 -69776111 - Lx5 LINE L1 -1602 4278 4131 2 842 329 45 0 0 chr15 33718850 33718894 -69776080 - L1Md_F3 LINE L1 -679 5905 5862 2 842 27399 68 3 14 chr15 33718912 33724993 -69769981 - L1Md_F2 LINE L1 -2 6583 563 2 842 3534 178 21 14 chr15 33724998 33725111 -69769863 - Lx5 LINE L1 -1713 4167 4059 2 842 2423 110 0 58 chr15 33725111 33725458 -69769516 - ORR1A2 LTR MaLR 0 327 1 2 842 3534 178 21 14 chr15 33725458 33726045 -69768929 - Lx5 LINE L1 -1822 4058 3462 2 842 7425 116 41 9 chr15 33726050 33727141 -69767833 - Lx3_Mus LINE L1 -7 7002 5877 2 842 2684 111 10 5 chr15 33727143 33727543 -69767431 + RLTR9E LTR ERVK 3 404 -5 2 842 275 231 12 82 chr15 33727551 33727636 -69767338 + ETnERV-int LTR ERVK 2 80 -3234 2 842 630 224 0 0 chr15 33727637 33727784 -69767190 + GA-rich Low_complexity Low_complexity 2 148 0 2 842 2072 218 31 23 chr15 33727791 33728275 -69766699 + ETnERV-int LTR ERVK 72 559 -2755 2 842 2136 202 9 22 chr15 33728277 33728737 -69766237 + L1VL1 LINE L1 1 454 -5968 2 842 598 161 0 0 chr15 33728738 33728850 -69766124 + L1VL4 LINE L1 383 494 -6025 2 842 8964 68 56 0 chr15 33728845 33730015 -69764959 + L1Md_F2 LINE L1 4347 5581 -302 2 842 7962 75 4 12 chr15 33730021 33731024 -69763950 + L1Md_F2 LINE L1 5588 6582 0 2 842 3744 136 31 37 chr15 33731024 33731675 -69763299 + ETnERV2-int LTR ERVK 5774 6420 -986 2 842 557 93 0 0 chr15 33731888 33731963 -69763011 + ETnERV2-int LTR ERVK 7331 7405 -1 2 842 1065 102 0 7 chr15 33731963 33732111 -69762863 + RLTR9E LTR ERVK 1 147 -262 2 842 19989 95 43 25 chr15 33732111 33732575 -69762399 - L1_Mur1 LINE L1 -333 5553 5117 2 842 414 0 0 0 chr15 33732575 33732621 -69762353 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 842 19989 95 43 25 chr15 33732621 33735255 -69759719 - L1_Mur1 LINE L1 -770 5116 2400 2 842 3217 79 2 5 chr15 33735260 33735665 -69759309 - L1_Mus1 LINE L1 0 6567 6164 2 842 277 204 19 0 chr15 33735865 33735919 -69759055 + B3 SINE B2 90 144 -72 2 842 26 55 0 52 chr15 33736052 33736129 -69758845 + AT_rich Low_complexity Low_complexity 1 73 0 2 842 9816 159 35 47 chr15 33736340 33737535 -69757439 + L1VL4 LINE L1 474 1589 -2228 2 842 234 0 0 0 chr15 33737535 33737561 -69757413 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 842 9816 109 35 5 chr15 33737561 33738639 -69756335 + L1VL4 LINE L1 1590 2695 -1122 2 842 270 316 17 26 chr15 33738644 33738761 -69756213 + Charlie9 DNA MER1_type 988 1103 -1654 2 842 445 303 57 13 chr15 33738938 33739095 -69755879 + Lx8 LINE L1 6929 7092 -381 2 842 1352 298 68 28 chr15 33739106 33739604 -69755370 + Lx8 LINE L1 6736 7253 -220 2 842 483 87 0 0 chr15 33739647 33739716 -69755258 + (CA)n Simple_repeat Simple_repeat 2 70 0 2 842 651 196 20 95 chr15 33739974 33740121 -69754853 + B1_Mur4 SINE Alu 5 140 -10 2 842 290 352 61 22 chr15 33740162 33740342 -69754632 - L2 LINE L2 -1135 2284 2098 2 842 9276 25 2 0 chr15 33740400 33742135 -69752839 - L1Md_T LINE L1 -1 6581 4842 2 842 286 365 170 24 chr15 33742171 33742724 -69752250 - L2 LINE L2 -1442 1977 1344 2 842 2396 112 54 108 chr15 33743872 33744374 -69750600 - IAPLTR2_Mm LTR ERVK 0 475 1 2 842 6251 36 3 19 chr15 33744376 33745132 -69749842 - IAPEz-int LTR ERVK -2 6479 5736 2 842 2194 75 0 0 chr15 33745131 33745409 -69749565 - IAPEz-int LTR ERVK -4845 1636 1359 2 842 3660 55 1 17 chr15 33745409 33745988 -69748986 - IAPEz-int LTR ERVK -5819 662 168 2 842 250 302 0 0 chr15 33745988 33746041 -69748933 - RLTR27 LTR ERVK -34 275 223 2 842 228 321 0 0 chr15 33746069 33746122 -69748852 - RLTR27 LTR ERVK -34 275 223 2 842 929 137 16 98 chr15 33746122 33746316 -69748658 - IAPEz-int LTR ERVK -6286 195 18 2 842 311 127 0 18 chr15 33746314 33746370 -69748604 - IAPEz-int LTR ERVK -1930 57 3 2 842 2453 112 79 90 chr15 33746397 33746877 -69748097 - IAPLTR2_Mm LTR ERVK 0 475 1 2 842 234 0 0 0 chr15 33746968 33746994 -69747980 + (T)n Simple_repeat Simple_repeat 1 26 0 2 842 203 374 98 17 chr15 33747984 33748158 -69746816 + L2b LINE L2 2759 2946 -473 2 842 444 272 63 42 chr15 33748170 33748312 -69746662 - LTR79 LTR ERVL -3 524 380 2 842 225 274 16 0 chr15 33748738 33748800 -69746174 + L2b LINE L2 3059 3121 -254 2 842 3802 67 14 17 chr15 33749006 33749489 -69745485 + L1Md_F2 LINE L1 6100 6581 -1 2 842 281 93 0 18 chr15 33749623 33749678 -69745296 + (CAAAAA)n Simple_repeat Simple_repeat 1 54 0 2 842 439 375 73 36 chr15 33749711 33750013 -69744961 - LTR16A LTR ERVL -102 349 37 2 842 345 125 0 0 chr15 33750195 33750251 -69744723 + (CATATA)n Simple_repeat Simple_repeat 2 57 0 2 842 314 80 20 0 chr15 33750280 33750330 -69744644 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 842 226 365 66 20 chr15 33750400 33750551 -69744423 - MIRb SINE MIR -40 228 71 2 842 244 311 122 0 chr15 33750895 33750969 -69744005 - ID4_ SINE ID 0 83 1 2 842 1498 159 116 62 chr15 33751382 33751718 -69743256 + ORR1B1 LTR MaLR 41 394 0 2 842 563 286 164 15 chr15 33752103 33752298 -69742676 + B4A SINE B4 1 224 -68 3 842 357 43 0 0 chr15 33752299 33752346 -69742628 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 3 842 986 59 22 0 chr15 33752353 33752489 -69742485 + (GGAGAA)n Simple_repeat Simple_repeat 3 141 0 3 842 236 264 0 22 chr15 33752948 33753037 -69741937 - Charlie23a DNA MER1_type -94 245 159 3 842 245 308 46 46 chr15 33753047 33753156 -69741818 + PB1D10 SINE Alu 4 112 -5 3 842 3082 147 48 13 chr15 33753250 33753336 -69741638 + L1VL2 LINE L1 231 315 -6020 3 842 492 18 0 0 chr15 33753336 33753393 -69741581 + (TA)n Simple_repeat Simple_repeat 2 58 0 3 842 3082 147 48 13 chr15 33753393 33753849 -69741125 + L1VL2 LINE L1 316 791 -5544 3 842 19056 95 10 18 chr15 33754775 33757422 -69737552 + MERVK26-int LTR ERVK 363 2988 -3931 3 842 2413 95 24 9 chr15 33757459 33757800 -69737174 + MERVK26-int LTR ERVK 5191 5536 -1383 3 842 255 333 26 9 chr15 33757827 33757942 -69737032 + LTR48 LTR ERV1 484 600 -187 3 842 217 0 29 29 chr15 33757944 33757978 -69736996 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 3 842 2707 73 11 45 chr15 33759099 33759163 -69735811 - ORR1A1 LTR MaLR 0 346 279 3 842 234 0 0 0 chr15 33759163 33759189 -69735785 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 3 842 2707 73 11 45 chr15 33759189 33759482 -69735492 - ORR1A1 LTR MaLR -68 278 1 3 842 6836 25 8 3 chr15 33759500 33760260 -69734714 - L1Md_F3 LINE L1 -14 6570 5807 3 842 2170 36 0 0 chr15 33760260 33760510 -69734464 + L1Md_F3 LINE L1 5558 5807 -76 3 842 23 54 0 0 chr15 33760676 33760713 -69734261 + AT_rich Low_complexity Low_complexity 1 37 0 3 842 190 211 55 55 chr15 33761137 33761192 -69733782 - MIRb SINE MIR -81 187 133 3 842 1035 44 29 7 chr15 33761203 33761339 -69733635 + RLTR45 LTR ERVK 344 482 0 3 842 4430 72 107 19 chr15 33761339 33761975 -69732999 + RLTR45-int LTR ERVK 1 692 -6552 3 842 1156 51 0 0 chr15 33762264 33762402 -69732572 + RLTR45-int LTR ERVK 681 818 -6426 3 842 12103 41 13 11 chr15 33763184 33765007 -69729967 + RLTR45-int LTR ERVK 1322 3212 -4032 3 842 4068 82 30 34 chr15 33764977 33765587 -69729387 + RLTR45-int LTR ERVK 3380 3986 -3258 3 842 8459 37 4 7 chr15 33765580 33766591 -69728383 + RLTR45-int LTR ERVK 5065 6072 -1172 3 842 2013 101 13 3 chr15 33766613 33766912 -69728062 + RLTR13B1 LTR ERVK 207 508 -385 3 842 1953 55 0 4 chr15 33766912 33767149 -69727825 + RLTR45-int LTR ERVK 6333 6568 -676 3 842 6156 46 0 4 chr15 33767141 33767864 -69727110 + RLTR45-int LTR ERVK 6525 7244 0 3 842 2613 81 17 3 chr15 33767864 33768224 -69726750 + RLTR45 LTR ERVK 1 365 -117 3 842 180 0 0 0 chr15 33768224 33768244 -69726730 + (A)n Simple_repeat Simple_repeat 1 20 0 3 842 378 305 122 59 chr15 33768343 33768580 -69726394 + MIRb SINE MIR 9 260 -8 3 842 21 0 0 0 chr15 33769092 33769113 -69725861 + AT_rich Low_complexity Low_complexity 1 21 0 3 842 41223 20 1 6 chr15 33769321 33775706 -69719268 - L1Md_A LINE L1 -1 6581 232 3 842 420 211 61 7 chr15 33776555 33776703 -69718271 + L1_Mur2 LINE L1 855 1010 -6718 3 842 371 246 96 9 chr15 33776703 33776818 -69718156 + Lx5 LINE L1 6926 7050 0 3 842 318 217 191 0 chr15 33776851 33776966 -69718008 + L1_Mur2 LINE L1 939 1075 -6011 3 842 1173 79 0 0 chr15 33776968 33777107 -69717867 + B1_Mus1 SINE Alu 2 140 -8 3 842 235 200 0 0 chr15 33777107 33777147 -69717827 + G-rich Low_complexity Low_complexity 2 41 0 3 842 891 125 0 18 chr15 33777147 33777318 -69717656 + (GAA)n Simple_repeat Simple_repeat 1 168 0 3 842 716 210 82 3 chr15 33777328 33777606 -69717368 + L1_Mur2 LINE L1 1062 1374 -4503 3 842 7579 71 4 34 chr15 33777613 33779182 -69715792 - L1Md_F2 LINE L1 -2 6580 5059 3 842 2960 175 0 19 chr15 33779190 33779721 -69715253 - L1Md_F LINE L1 -5907 612 92 3 842 3028 194 50 57 chr15 33779737 33779955 -69715019 + L1_Mur2 LINE L1 1580 1765 -4115 3 842 1794 122 30 0 chr15 33779955 33780217 -69714757 - L1_Mus3 LINE L1 -2 6636 6367 3 842 3028 194 50 57 chr15 33780217 33780784 -69714190 + L1_Mur2 LINE L1 1766 2359 -3521 3 842 1570 210 55 39 chr15 33780884 33781245 -69713729 + RMER1B Other Other 544 910 -156 3 842 471 187 111 9 chr15 33781381 33781489 -69713485 + RMER1B Other Other 934 1052 -14 3 842 3180 200 82 14 chr15 33781499 33782314 -69712660 + L1_Mur2 LINE L1 2332 3202 -2675 3 842 4729 120 11 37 chr15 33782315 33783113 -69711861 + L1VL2 LINE L1 287 1064 -2551 3 842 5081 104 23 29 chr15 33783111 33783950 -69711024 + L1VL2 LINE L1 2155 2988 -627 3 842 16263 152 14 56 chr15 33784212 33785749 -69709225 + Lx LINE L1 2714 4233 -2421 3 842 454 224 8 114 chr15 33785749 33785768 -69709206 + MT2B LTR ERVL 147 151 -450 3 842 848 156 0 0 chr15 33785768 33785896 -69709078 + B1_Mus1 SINE Alu 1 128 -20 3 842 16263 152 14 56 chr15 33785896 33788343 -69706631 + Lx LINE L1 4234 6654 0 3 842 5139 169 46 79 chr15 33788348 33788872 -69706102 + L1_Mur2 LINE L1 3204 3731 -2146 3 842 3751 73 21 4 chr15 33788872 33789339 -69705635 + MT2C_Mm LTR ERVL 1 475 0 3 842 5139 169 46 79 chr15 33789339 33789793 -69705181 + L1_Mur2 LINE L1 3732 4189 -1688 3 842 306 0 0 0 chr15 33789793 33789827 -69705147 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 842 5139 169 46 79 chr15 33789827 33790076 -69704898 + L1_Mur2 LINE L1 4190 4391 -1486 3 842 1687 278 15 38 chr15 33791443 33791922 -69703052 + Lx6 LINE L1 6966 7433 -27 3 842 299 321 0 0 chr15 33791965 33792046 -69702928 + ID4_ SINE ID 3 83 0 3 842 26 30 0 0 chr15 33793273 33793306 -69701668 + AT_rich Low_complexity Low_complexity 1 33 0 3 842 264 59 0 0 chr15 33793394 33793428 -69701546 + (TTA)n Simple_repeat Simple_repeat 3 36 0 3 842 626 282 26 0 chr15 33793433 33793628 -69701346 - Lx9 LINE L1 -171 7473 7274 3 842 745 201 107 10 chr15 33793638 33793844 -69701130 - RCHARR1 DNA MER1_type -2 972 747 3 842 382 297 17 114 chr15 33794112 33794287 -69700687 + RSINE1 SINE B4 8 165 0 3 842 37 23 0 0 chr15 33794287 33794331 -69700643 + AT_rich Low_complexity Low_complexity 1 44 0 3 842 3498 65 0 0 chr15 33794571 33794971 -69700003 + MTB LTR MaLR 1 400 0 3 842 1389 51 0 0 chr15 33795458 33795672 -69699302 + (GAA)n Simple_repeat Simple_repeat 1 214 0 3 842 474 25 25 6 chr15 33795695 33795767 -69699207 - MTB LTR MaLR -110 311 220 3 842 468 0 0 0 chr15 33795771 33795823 -69699151 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 842 399 307 93 67 chr15 33795837 33795987 -69698987 - RSINE1 SINE B4 -10 155 2 3 842 602 331 5 11 chr15 33796612 33796801 -69698173 - MLT2B1 LTR ERVL 0 567 380 3 842 2209 75 6 13 chr15 33796791 33797102 -69697872 + MTB LTR MaLR 92 400 0 3 842 3573 115 32 5 chr15 33797290 33797884 -69697090 + L1Md_T LINE L1 209 818 -5909 3 842 37485 26 1 0 chr15 33797887 33802278 -69692696 + L1Md_T LINE L1 1099 5589 -297 3 842 9042 32 0 0 chr15 33802278 33803274 -69691700 + L1Md_T LINE L1 5590 6585 0 3 842 857 234 91 5 chr15 33803579 33803743 -69691231 + B3 SINE B2 1 179 -37 3 842 405 0 0 0 chr15 33803743 33803788 -69691186 + (CATA)n Simple_repeat Simple_repeat 2 46 0 3 842 857 234 91 5 chr15 33803788 33803821 -69691153 + B3 SINE B2 180 215 -1 3 842 671 232 14 7 chr15 33803925 33804068 -69690906 + Lx8 LINE L1 7182 7325 -148 3 842 1048 282 87 85 chr15 33804640 33805240 -69689734 - MT2B LTR ERVL 0 601 1 3 842 184 219 24 0 chr15 33805463 33805504 -69689470 - L2b LINE L2 -9 3366 3325 3 842 2289 167 52 20 chr15 33805668 33806072 -69688902 - MTC LTR MaLR 0 421 5 3 842 4880 179 44 28 chr15 33806356 33807498 -69687476 + L1_Mur3 LINE L1 305 1472 -4408 3 842 543 98 0 0 chr15 33809424 33809516 -69685458 + (GA)n Simple_repeat Simple_repeat 2 93 0 3 842 27 0 0 0 chr15 33809835 33809862 -69685112 + AT_rich Low_complexity Low_complexity 1 27 0 3 842 39642 44 8 0 chr15 33809934 33816252 -69678722 - L1Md_T LINE L1 -1 6581 280 3 843 2490 169 209 73 chr15 33817195 33817730 -69677244 + L1_Mur3 LINE L1 2392 3000 -2880 3 843 1652 37 16 0 chr15 33817730 33817920 -69677054 + B2_Mm1a SINE B2 1 193 0 3 843 2490 169 209 73 chr15 33817920 33818169 -69676805 + L1_Mur3 LINE L1 3001 3283 -2597 3 843 1242 157 35 0 chr15 33818139 33818368 -69676606 + L1_Mur3 LINE L1 4439 4675 -1202 3 843 362 270 87 52 chr15 33818652 33818824 -69676150 + LTRIS5 LTR ERV1 186 363 -84 3 843 486 0 0 0 chr15 33818936 33818990 -69675984 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 843 1459 67 0 11 chr15 33819017 33819197 -69675777 + B2_Mm2 SINE B2 4 181 -14 3 843 1576 143 7 62 chr15 33819208 33819513 -69675461 + L1_Mur3 LINE L1 4799 5086 -794 3 843 273 353 6 6 chr15 33820289 33820446 -69674528 + RNERVK23-int LTR ERVK 289 445 -7772 3 843 1990 156 32 93 chr15 33820467 33820877 -69674097 + RLTR41 LTR ERV1 62 446 0 3 843 623 318 79 19 chr15 33822069 33822542 -69672432 + RLTR6-int LTR ERV1 1292 1984 -5794 3 843 274 237 120 56 chr15 33822683 33822808 -69672166 + RLTR6-int LTR ERV1 2456 2588 -2102 3 843 2929 307 74 53 chr15 33822941 33824786 -69670188 + MuRRS4-int LTR ERV1 2138 4020 -1043 3 843 557 318 39 13 chr15 33825591 33825861 -69669113 + MuRRS4-int LTR ERV1 4663 4888 -175 3 843 1536 178 84 84 chr15 33825994 33826350 -69668624 + RLTR41 LTR ERV1 91 446 0 3 843 2598 97 62 141 chr15 33826361 33826828 -69668146 - RLTR23 LTR ERV1 0 430 1 3 843 473 283 54 29 chr15 33826954 33827168 -69667806 - RLTR6-int LTR ERV1 -287 7491 7303 3 843 785 48 30 60 chr15 33827599 33827733 -69667241 + L1Md_F2 LINE L1 6453 6582 0 3 843 1230 326 40 45 chr15 33828000 33828803 -69666171 - MuRRS4-int LTR ERV1 -1043 4020 3164 3 843 927 334 56 70 chr15 33829273 33829909 -69665065 - MMERGLN-int LTR ERV1 -3334 4222 3588 3 843 3738 25 0 0 chr15 33829909 33830305 -69664669 + MTA_Mm LTR MaLR 1 396 0 3 843 927 328 87 72 chr15 33830305 33830926 -69664048 - MMERGLN-int LTR ERV1 -4107 3671 3050 3 843 373 298 64 48 chr15 33830960 33831147 -69663827 - MMERGLN-int LTR ERV1 -5936 1842 1653 3 843 278 273 66 36 chr15 33831565 33831702 -69663272 + RMER16-int LTR ERVK 5241 5381 -25 3 843 6276 142 35 6 chr15 33832037 33832968 -69662006 - RMER17B LTR ERVK 0 958 1 3 843 3017 179 0 17 chr15 33833029 33833148 -69661826 + Lx5 LINE L1 5073 5189 -688 3 843 1433 93 5 5 chr15 33833148 33833332 -69661642 + B2_Mm2 SINE B2 2 185 -10 3 843 3420 197 22 107 chr15 33833332 33833991 -69660983 + Lx5 LINE L1 5176 5823 -1227 3 843 883 144 14 0 chr15 33833991 33834137 -69660837 + B1_Mus1 SINE Alu 1 148 0 3 843 3420 197 22 107 chr15 33834137 33834775 -69660199 + Lx5 LINE L1 5824 6452 -598 3 843 1222 211 66 33 chr15 33834783 33835116 -69659858 + RLTR15 LTR ERVK 1 344 -15 3 843 1435 248 249 26 chr15 33835145 33835504 -69659470 + Lx5 LINE L1 6682 7158 -302 3 843 5207 98 19 34 chr15 33835504 33836261 -69658713 - L1_Mus3 LINE L1 -6 6632 5888 3 843 1435 248 249 26 chr15 33836261 33836484 -69658490 + Lx5 LINE L1 7159 7394 -66 3 843 189 0 0 0 chr15 33836490 33836511 -69658463 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 843 5924 95 25 13 chr15 33838051 33839571 -69655403 + MusHAL1 LINE L1 8 1546 -1807 3 843 3572 91 20 0 chr15 33839607 33840067 -69654907 - L1_Mus1 LINE L1 0 6567 6099 3 843 6199 82 1 0 chr15 33840067 33840873 -69654101 + L1Md_F2 LINE L1 4779 5585 -298 3 843 7701 80 18 5 chr15 33840874 33841857 -69653117 + L1Md_F2 LINE L1 5587 6582 0 3 843 1361 7 0 7 chr15 33841974 33842122 -69652852 + B1_Mus2 SINE Alu 1 147 0 3 843 229 111 28 0 chr15 33842336 33842372 -69652602 + L1_Rod LINE L1 5158 5194 -653 3 843 1020 312 108 17 chr15 33842369 33842851 -69652123 + Lx8 LINE L1 6827 7352 -121 3 843 203 344 0 0 chr15 33842872 33842936 -69652038 - L2a LINE L2 -19 3407 3344 3 843 436 326 80 44 chr15 33843228 33843453 -69651521 + MLT1C LTR MaLR 1 233 -234 3 843 1112 274 34 8 chr15 33843465 33843688 -69651286 + B4 SINE B4 1 223 -69 3 843 405 0 0 0 chr15 33843688 33843733 -69651241 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 3 843 1112 274 34 8 chr15 33843733 33843774 -69651200 + B4 SINE B4 224 271 -21 3 843 276 77 0 0 chr15 33843785 33843824 -69651150 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 843 1200 95 0 0 chr15 33843905 33844053 -69650921 + B1_Mus1 SINE Alu 1 148 0 3 843 377 312 31 0 chr15 33844065 33844193 -69650781 + MLT1C LTR MaLR 336 467 0 3 843 247 261 110 63 chr15 33845215 33845342 -69649632 - MER5A1 DNA MER1_type -31 135 3 3 843 217 146 36 18 chr15 33846271 33846327 -69648647 + (TTA)n Simple_repeat Simple_repeat 2 58 0 3 843 268 233 19 19 chr15 33846455 33846560 -69648414 + (TTATA)n Simple_repeat Simple_repeat 5 109 0 3 843 1850 114 85 186 chr15 33846579 33847107 -69647867 + IAPLTR2_Mm LTR ERVK 1 475 0 4 843 2160 178 128 2 chr15 33847133 33847556 -69647418 - RMER15 LTR ERVL 0 575 100 4 843 971 259 59 0 chr15 33847581 33847836 -69647138 - Lx8 LINE L1 -203 7270 7001 4 843 667 269 202 125 chr15 33847973 33848325 -69646649 + MTEa LTR MaLR 1 379 0 4 843 1559 154 27 4 chr15 33848619 33848880 -69646094 - Lx LINE L1 0 6654 6388 4 843 325 283 49 24 chr15 33848959 33849082 -69645892 + MIR SINE MIR 111 236 -26 4 843 184 167 0 40 chr15 33849134 33849184 -69645790 + GA-rich Low_complexity Low_complexity 1 48 0 4 843 525 16 0 0 chr15 33849356 33849418 -69645556 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 843 571 212 44 0 chr15 33849418 33849531 -69645443 - B1_Mur2 SINE Alu -11 138 21 4 843 226 293 54 96 chr15 33849554 33849720 -69645254 + L1VL1 LINE L1 192 350 -6072 4 843 6782 94 58 1 chr15 33849707 33850664 -69644310 + L1_Mm LINE L1 4644 5654 -229 4 843 5538 33 9 0 chr15 33850664 33851293 -69643681 + L1Md_F3 LINE L1 5936 6570 -14 4 843 6061 60 0 0 chr15 33851295 33851999 -69642975 + L1_Mus1 LINE L1 5864 6567 0 4 843 3129 74 25 13 chr15 33852618 33853013 -69641961 + MTB LTR MaLR 1 400 0 4 843 198 0 0 0 chr15 33853060 33853082 -69641892 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 843 594 60 0 0 chr15 33853085 33853168 -69641806 + (GA)n Simple_repeat Simple_repeat 2 84 0 4 843 186 220 0 0 chr15 33853365 33853424 -69641550 + GA-rich Low_complexity Low_complexity 2 60 0 4 843 673 118 0 16 chr15 33854701 33854822 -69640152 + (GGGA)n Simple_repeat Simple_repeat 4 122 0 4 843 588 288 17 46 chr15 33854850 33854894 -69640080 + L1MA4A LINE L1 5505 5544 -303 4 843 794 193 52 0 chr15 33854894 33855029 -69639945 + B1_Mur3 SINE Alu 1 142 -7 4 843 189 0 0 0 chr15 33855030 33855051 -69639923 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 4 843 588 293 20 46 chr15 33855051 33855278 -69639696 + L1MA4A LINE L1 5545 5836 -467 4 843 578 308 141 38 chr15 33855481 33855828 -69639146 + MER57D LTR ERV1 27 409 -2 4 843 445 227 47 8 chr15 33855831 33855960 -69639014 + L1MA9 LINE L1 6179 6312 0 4 843 352 68 0 0 chr15 33856038 33856082 -69638892 + B1_Mus1 SINE Alu 1 44 -104 4 843 454 316 91 77 chr15 33857122 33857574 -69637400 + Charlie1b DNA MER1_type 38 495 -28 4 843 629 251 80 96 chr15 33857580 33857893 -69637081 - ORR1E LTR MaLR -5 354 47 4 843 1092 182 20 5 chr15 33857888 33858092 -69636882 + URR1B DNA MER1_type 17 223 -2 4 843 309 226 0 0 chr15 33858092 33858150 -69636824 - ORR1E LTR MaLR -294 65 8 4 843 442 108 0 0 chr15 33858321 33858386 -69636588 + ORR1C1 LTR MaLR 314 378 0 4 843 326 221 0 14 chr15 33858884 33858953 -69636021 - MTD LTR MaLR -284 135 68 4 843 204 216 0 0 chr15 33858953 33858990 -69635984 + CT-rich Low_complexity Low_complexity 2 38 0 4 843 207 0 0 0 chr15 33858990 33859013 -69635961 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 843 6043 124 18 11 chr15 33859038 33859921 -69635053 - Lx LINE L1 0 6654 5766 4 843 478 258 30 42 chr15 33860103 33860269 -69634705 + RLTR43A LTR ERVK 201 364 0 4 843 270 0 0 0 chr15 33860578 33860608 -69634366 + (TAAAA)n Simple_repeat Simple_repeat 5 34 0 4 843 1792 26 0 0 chr15 33860774 33860966 -69634008 + B2_Mm1t SINE B2 2 193 0 4 843 369 133 0 0 chr15 33860966 33861041 -69633933 + (A)n Simple_repeat Simple_repeat 1 75 0 4 843 2401 161 131 27 chr15 33861151 33861662 -69633312 + ETnERV2-int LTR ERVK 256 819 -4587 4 843 2658 177 23 8 chr15 33861666 33862140 -69632834 + ETnERV2-int LTR ERVK 1078 1558 -3848 4 843 9128 224 20 14 chr15 33862156 33864163 -69630811 + ETnERV2-int LTR ERVK 4083 5793 -1613 4 843 1144 162 5 16 chr15 33864158 33864352 -69630622 + RMER16-int LTR ERVK 3791 3982 -1424 4 843 423 0 0 0 chr15 33864932 33864979 -69629995 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 843 413 335 12 24 chr15 33865286 33865454 -69629520 + RodERV21-int LTR ERV1 4398 4563 -428 4 843 1124 96 7 7 chr15 33865636 33865783 -69629191 - B1_Mus1 SINE Alu 0 148 2 4 843 252 219 40 40 chr15 33865789 33865865 -69629109 + RNERVK23-int LTR ERVK 7735 7810 -407 4 843 1508 218 40 29 chr15 33865869 33866219 -69628755 + ETnERV2-int LTR ERVK 6644 6997 -409 4 843 31859 90 11 10 chr15 33866253 33871318 -69623656 + L1Md_F2 LINE L1 515 5585 -298 4 843 7945 77 2 10 chr15 33871319 33871831 -69623143 + L1Md_F2 LINE L1 5587 6095 -487 4 843 3633 28 2 2 chr15 33871831 33872227 -69622747 + MTA_Mm LTR MaLR 1 396 0 4 843 10138 18 4 0 chr15 33872227 33873321 -69621653 + MTA_Mm-int LTR MaLR 1 1098 0 4 843 3585 33 2 2 chr15 33873321 33873717 -69621257 + MTA_Mm LTR MaLR 1 396 0 4 843 7945 77 2 10 chr15 33873717 33874193 -69620781 + L1Md_F2 LINE L1 6096 6567 -15 4 843 477 0 0 0 chr15 33874229 33874282 -69620692 + (TTA)n Simple_repeat Simple_repeat 3 55 0 4 843 432 297 30 42 chr15 33874481 33874646 -69620328 + RLTR43A LTR ERVK 202 364 0 4 843 20040 162 27 4 chr15 33874646 33878200 -69616774 - L1_Mm LINE L1 -108 5775 2138 4 843 5702 95 16 8 chr15 33878180 33879219 -69615755 - L1VL2 LINE L1 -2380 1235 188 4 843 387 171 26 13 chr15 33879220 33879297 -69615677 - MTC LTR MaLR -343 78 1 4 843 361 227 13 13 chr15 33879301 33879377 -69615597 - RSINE1 SINE B4 -88 77 2 4 843 524 266 149 92 chr15 33879607 33879684 -69615290 - B4 SINE B4 -11 281 212 4 843 456 19 0 0 chr15 33879684 33879737 -69615237 + (CTTG)n Simple_repeat Simple_repeat 3 55 0 4 843 524 266 149 92 chr15 33879737 33879887 -69615087 - B4 SINE B4 -81 211 41 4 843 390 348 99 47 chr15 33879996 33880228 -69614746 - MIRb SINE MIR -5 263 20 4 843 250 203 66 33 chr15 33881084 33881145 -69613829 - MuLV-int LTR ERV1 -6261 1345 1283 4 843 450 340 96 41 chr15 33881427 33881697 -69613277 - MLT1H LTR MaLR -260 289 5 4 843 6585 133 53 0 chr15 33882721 33883858 -69611116 + Lx LINE L1 5468 6653 -1 4 843 349 240 20 29 chr15 33885042 33885170 -69609804 - MLT1A1 LTR MaLR -7 401 233 4 843 3370 46 13 0 chr15 33885359 33885750 -69609224 + MTA_Mm LTR MaLR 1 396 0 4 843 2085 88 12 89 chr15 33885969 33886305 -69608669 - ORR1A2 LTR MaLR 0 327 18 4 843 693 291 39 15 chr15 33886555 33886761 -69608213 + B3 SINE B2 2 212 -4 4 843 1359 250 132 14 chr15 33887005 33887354 -69607620 + RMER1B Other Other 1 390 -676 4 843 2323 164 40 73 chr15 33887376 33887857 -69607117 + RMER1A Other Other 560 1024 -6 4 843 882 95 0 0 chr15 33888122 33888248 -69606726 + (TC)n Simple_repeat Simple_repeat 2 127 0 4 843 496 279 191 19 chr15 33888252 33888364 -69606610 - L1MD LINE L1 -1318 4828 4704 4 843 2958 80 10 8 chr15 33888364 33888755 -69606219 - L1Md_F2 LINE L1 -2 6580 6189 4 843 496 279 191 19 chr15 33888755 33888967 -69606007 - L1MD LINE L1 -1443 4703 4448 4 843 6016 82 24 0 chr15 33889002 33889802 -69605172 - L1_Mus1 LINE L1 0 6567 5782 4 843 13597 57 6 0 chr15 33889804 33891961 -69603013 - L1Md_F2 LINE L1 -271 6311 4143 4 843 1047 149 0 0 chr15 33891953 33892128 -69602846 - L1_Mm LINE L1 -1144 4739 4565 4 843 2980 167 4 0 chr15 33892128 33892588 -69602386 - RMER13B LTR ERVK -446 462 1 4 843 1172 110 0 0 chr15 33892940 33893086 -69601888 + B1_Mus1 SINE Alu 1 146 -2 4 843 204 67 0 0 chr15 33893091 33893121 -69601853 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 843 1442 254 20 110 chr15 33893579 33893978 -69600996 - MTE2b LTR MaLR -14 365 3 4 843 3304 132 0 0 chr15 33894612 33895058 -69599916 - RLTR41 LTR ERV1 0 446 1 4 843 272 227 280 0 chr15 33895148 33895223 -69599751 + ID_B1 SINE B4 112 207 -17 4 843 249 232 76 107 chr15 33895223 33895247 -69599727 + PB1D10 SINE Alu 44 122 -26 4 843 4914 97 33 57 chr15 33895867 33896696 -69598278 + RMER17D2 LTR ERVK 1 809 0 4 843 241 326 164 11 chr15 33898025 33898202 -69596772 - L2c LINE L2 -1 3386 3183 4 843 230 260 0 0 chr15 33898660 33898710 -69596264 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 4 843 872 224 70 28 chr15 33900024 33900340 -69594634 - ORR1D2 LTR MaLR -8 376 1 4 843 1429 252 60 23 chr15 33901112 33901465 -69593509 - MTEa LTR MaLR -13 366 1 4 843 334 237 3 16 chr15 33902033 33902110 -69592864 + B1_Mur1 SINE Alu 75 147 0 4 843 771 138 0 0 chr15 33902110 33902248 -69592726 + (GAAA)n Simple_repeat Simple_repeat 3 140 0 4 843 713 192 144 88 chr15 33902487 33902681 -69592293 - B3 SINE B2 -1 215 11 4 843 390 129 0 0 chr15 33902739 33902801 -69592173 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 843 344 355 41 0 chr15 33902949 33903070 -69591904 + MLT1I LTR MaLR 73 198 -213 4 843 405 129 71 0 chr15 33903204 33903289 -69591685 - Lx2 LINE L1 0 6997 6907 4 843 222 414 35 23 chr15 33903431 33903604 -69591370 - L2 LINE L2 -641 2778 2604 4 843 313 255 96 70 chr15 33903618 33903774 -69591200 - MLT1F1 LTR MaLR 0 569 410 4 843 2275 178 34 5 chr15 33904409 33904816 -69590158 - Lx LINE L1 0 6654 6236 4 843 336 320 204 0 chr15 33905434 33905581 -69589393 - MER20 DNA MER1_type -6 213 37 4 843 978 107 0 0 chr15 33905595 33905772 -69589202 + (TG)n Simple_repeat Simple_repeat 1 177 0 4 843 503 304 84 73 chr15 33905803 33906090 -69588884 - B4A SINE B4 0 292 3 4 843 259 317 12 12 chr15 33906159 33906242 -69588732 + (TGG)n Simple_repeat Simple_repeat 1 83 0 4 843 701 311 30 5 chr15 33906313 33906510 -69588464 - ID_B1 SINE B4 -20 204 3 4 843 394 348 0 0 chr15 33906537 33906652 -69588322 - PB1D10 SINE Alu -2 115 1 4 843 3174 131 171 15 chr15 33906862 33907459 -69587515 - RMER6C LTR ERVK 0 690 1 4 843 456 19 0 0 chr15 33907478 33907531 -69587443 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 843 750 78 0 0 chr15 33907805 33907907 -69587067 + (GAAA)n Simple_repeat Simple_repeat 2 103 0 4 843 278 243 0 26 chr15 33907923 33907999 -69586975 + CT-rich Low_complexity Low_complexity 2 75 0 4 843 668 244 22 0 chr15 33908034 33908169 -69586805 + B1_Mur1 SINE Alu 5 142 -7 4 843 399 284 11 0 chr15 33908183 33908278 -69586696 + PB1D10 SINE Alu 19 114 -3 4 843 26901 113 9 74 chr15 33908308 33910705 -69584269 + L1VL1 LINE L1 218 2082 -3801 5 843 783 98 8 16 chr15 33910705 33910829 -69584145 + L1_Mus1 LINE L1 6445 6567 0 5 843 249 33 0 0 chr15 33910830 33910860 -69584114 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 843 26901 112 12 124 chr15 33910860 33914664 -69580310 + L1VL1 LINE L1 2083 5840 -43 5 843 15503 55 0 0 chr15 33914665 33916561 -69578413 + L1Md_F2 LINE L1 3691 5586 -297 5 843 8691 46 4 0 chr15 33916561 33917553 -69577421 + L1Md_F2 LINE L1 5587 6582 0 5 843 5794 98 23 6 chr15 33917548 33918341 -69576633 + L1_Mus3 LINE L1 5828 6633 -5 5 843 269 214 114 0 chr15 33919177 33919247 -69575727 + ID4 SINE ID 2 79 -4 5 843 226 261 0 0 chr15 33919729 33919775 -69575199 + B1_Mur4 SINE Alu 9 54 -96 5 843 1315 82 65 21 chr15 33919775 33919961 -69575013 + B2_Mm2 SINE B2 1 194 -1 5 843 204 135 0 0 chr15 33919961 33919998 -69574976 + (GGAA)n Simple_repeat Simple_repeat 1 37 0 5 843 1347 72 0 0 chr15 33920005 33920185 -69574789 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 5 843 650 148 0 0 chr15 33920188 33920289 -69574685 + B1_Mus2 SINE Alu 41 141 -6 5 843 27 0 0 0 chr15 33920289 33920316 -69574658 + AT_rich Low_complexity Low_complexity 1 27 0 5 843 255 376 25 8 chr15 33920490 33920608 -69574366 + PB1D9 SINE Alu 1 120 0 5 843 5009 88 8 2 chr15 33921128 33921766 -69573208 - L1_Mus1 LINE L1 0 6567 5926 5 843 1512 69 16 11 chr15 33922023 33922214 -69572760 - B2_Mm1t SINE B2 0 193 2 5 843 210 37 0 0 chr15 33922679 33922706 -69572268 + (A)n Simple_repeat Simple_repeat 1 27 0 5 843 6790 58 28 19 chr15 33922849 33923696 -69571278 - RLTR13A LTR ERVK 0 855 1 5 843 788 262 49 95 chr15 33924011 33924336 -69570638 - ORR1E LTR MaLR -47 312 3 5 843 1534 201 15 14 chr15 33924349 33924662 -69570312 - RMER19B LTR ERVK -326 411 1 5 843 498 84 0 0 chr15 33924745 33924816 -69570158 - ORR1B1 LTR MaLR -2 392 322 5 843 742 124 234 0 chr15 33924816 33924961 -69570013 - ORR1B1 LTR MaLR -215 179 1 5 843 342 180 21 53 chr15 33924969 33925063 -69569911 + Lx6 LINE L1 7344 7434 -26 5 843 965 80 0 0 chr15 33925066 33925191 -69569783 + B1_Mus2 SINE Alu 1 125 -22 5 843 1022 100 0 43 chr15 33925202 33925346 -69569628 + (GGAGAA)n Simple_repeat Simple_repeat 1 141 0 5 843 1578 15 0 2 chr15 33925346 33925754 -69569220 + (GAA)n Simple_repeat Simple_repeat 1 407 0 5 843 1022 73 0 40 chr15 33925754 33925824 -69569150 + (GGAGAA)n Simple_repeat Simple_repeat 1 67 0 5 843 21 36 0 0 chr15 33925824 33925852 -69569122 + AT_rich Low_complexity Low_complexity 1 28 0 5 843 356 338 26 80 chr15 33925852 33926003 -69568971 - MTE2a LTR MaLR -163 216 74 5 843 3356 203 124 34 chr15 33926003 33926650 -69568324 - RMER17B LTR ERVK 0 958 218 5 843 4729 76 12 27 chr15 33926650 33927246 -69567728 + LTRIS_Mus LTR ERV1 1 587 0 5 843 3356 203 124 34 chr15 33927246 33927477 -69567497 - RMER17B LTR ERVK -741 217 2 5 843 339 228 41 52 chr15 33927477 33927565 -69567409 - MTE2a LTR MaLR -315 104 18 5 843 461 246 95 68 chr15 33927565 33927713 -69567261 - ORR1B2 LTR MaLR -215 152 1 5 843 468 262 82 29 chr15 33927714 33927928 -69567046 - ORR1B2-int LTR MaLR -7 1251 1066 5 843 269 282 47 12 chr15 33927944 33928030 -69566944 + MER63B DNA AcHobo 339 427 -9 5 843 752 113 0 28 chr15 33928079 33928188 -69566786 + B1_Mur3 SINE Alu 37 142 -7 5 843 204 40 0 0 chr15 33928189 33928214 -69566760 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 5 843 867 197 0 0 chr15 33928214 33928392 -69566582 + GA-rich Low_complexity Low_complexity 2 179 0 5 843 369 339 104 63 chr15 33928487 33928881 -69566093 - L2a LINE L2 -44 3382 2973 5 843 360 187 61 71 chr15 33928998 33929017 -69565957 - MLT1A1 LTR MaLR -21 387 371 5 843 1954 178 110 13 chr15 33929017 33929399 -69565575 - MTD LTR MaLR 0 419 1 5 843 360 187 61 71 chr15 33929399 33929477 -69565497 - MLT1A1 LTR MaLR -38 370 291 5 843 1236 99 44 6 chr15 33930053 33930235 -69564739 + B2_Mm1t SINE B2 2 190 -3 5 843 400 322 6 76 chr15 33931603 33931761 -69563213 + B4A SINE B4 2 148 -144 5 843 518 244 22 22 chr15 33931786 33931920 -69563054 - RMER30 DNA MER1_type -54 148 15 5 843 2426 118 33 25 chr15 33932121 33932486 -69562488 - RLTR9A LTR ERVK 0 368 1 5 843 350 171 0 28 chr15 33932489 33932561 -69562413 - ETnERV-int LTR ERVK -6 7400 7331 5 843 284 0 132 0 chr15 33932571 33932647 -69562327 + (GCTG)n Simple_repeat Simple_repeat 1 86 0 5 843 3223 206 20 58 chr15 33932835 33933616 -69561358 - ETnERV-int LTR ERVK -984 6422 5671 5 843 6397 31 8 0 chr15 33933616 33934324 -69560650 + L1Md_T LINE L1 5869 6582 0 5 843 2039 170 52 23 chr15 33934330 33934351 -69560623 - ETnERV-int LTR ERVK -2928 4478 4458 5 843 1704 52 0 0 chr15 33934351 33934544 -69560430 - B2_Mm1t SINE B2 0 193 1 5 843 5121 296 34 29 chr15 33934544 33938252 -69556722 - ETnERV-int LTR ERVK -2949 4457 4 5 843 2259 119 60 23 chr15 33938254 33938605 -69556369 - RLTR9A LTR ERVK 0 368 5 5 843 513 311 68 68 chr15 33938879 33939114 -69555860 - RMER2 LTR ERV1 -4 563 329 5 843 3231 81 13 0 chr15 33939354 33939749 -69555225 + MTB LTR MaLR 1 400 0 5 843 24 32 0 0 chr15 33939769 33939800 -69555174 + AT_rich Low_complexity Low_complexity 1 31 0 5 843 2420 97 48 0 chr15 33939806 33940117 -69554857 - ORR1A2 LTR MaLR 0 327 2 5 843 247 319 0 34 chr15 33940383 33940500 -69554474 + C-rich Low_complexity Low_complexity 4 116 0 5 843 868 252 9 58 chr15 33940557 33940780 -69554194 - B3 SINE B2 -4 212 1 5 843 720 291 11 53 chr15 33941151 33941340 -69553634 + B4A SINE B4 1 181 -111 5 843 204 158 0 0 chr15 33941397 33941435 -69553539 + GA-rich Low_complexity Low_complexity 2 39 0 5 843 1229 265 221 2 chr15 33941641 33942049 -69552925 + MLT1D LTR MaLR 9 505 0 5 843 341 360 108 0 chr15 33942049 33942263 -69552711 - L2 LINE L2 -440 2979 2743 5 843 227 360 132 16 chr15 33943814 33944125 -69550849 - L2 LINE L2 -984 2435 2089 5 843 513 268 77 23 chr15 33944281 33944411 -69550563 + RSINE1 SINE B4 1 137 -28 5 843 1992 136 3 0 chr15 33944468 33944784 -69550190 + L1_Mur2 LINE L1 359 675 -6037 5 843 2019 149 33 17 chr15 33944784 33945214 -69549760 + RLTR31_Mm LTR ERVK 1 413 -148 5 843 3208 94 132 7 chr15 33945232 33945769 -69549205 + L1_Mur2 LINE L1 3062 3665 -2212 5 843 2049 151 136 33 chr15 33945769 33946167 -69548807 + BGLII_B LTR ERVK 2 440 -1 5 843 21 0 0 0 chr15 33946956 33946977 -69547997 + AT_rich Low_complexity Low_complexity 1 21 0 5 844 974 309 33 2 chr15 33947790 33948186 -69546788 + MYSERV6-int LTR ERVK 452 859 -8100 5 844 1601 60 5 0 chr15 33948192 33948393 -69546581 + Lx4A LINE L1 6324 6525 -533 5 844 512 185 167 0 chr15 33948486 33948594 -69546380 - B1_Mus1 SINE Alu -17 131 6 5 844 250 217 58 0 chr15 33948628 33948697 -69546277 - Lx9 LINE L1 -150 7494 7422 5 844 259 288 0 0 chr15 33948776 33948849 -69546125 + ID2 SINE ID 1 73 -10 5 844 256 350 185 14 chr15 33949052 33949268 -69545706 - L1MC4 LINE L1 -525 7517 7265 5 844 423 0 0 0 chr15 33949334 33949381 -69545593 + (TTTTA)n Simple_repeat Simple_repeat 4 50 0 5 844 544 269 28 45 chr15 33949460 33949634 -69545340 - ID_B1 SINE B4 -5 219 49 5 844 330 277 223 0 chr15 33949634 33949782 -69545192 + B3A SINE B2 2 182 -16 5 844 264 310 35 0 chr15 33949999 33950086 -69544888 - L1MC4 LINE L1 -1165 6877 6788 5 844 516 239 25 8 chr15 33950167 33950285 -69544689 + ID_B1 SINE B4 102 221 -3 5 844 477 90 0 0 chr15 33950295 33950362 -69544612 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 844 259 325 12 12 chr15 33950383 33950464 -69544510 - ID SINE ID -143 81 1 5 844 457 309 15 7 chr15 33950501 33950638 -69544336 + B1F2 SINE Alu 9 146 -3 5 844 240 200 0 0 chr15 33950640 33950695 -69544279 + A-rich Low_complexity Low_complexity 1 55 0 5 844 21 0 0 0 chr15 33950855 33950876 -69544098 + AT_rich Low_complexity Low_complexity 1 21 0 5 844 195 42 0 0 chr15 33950996 33951020 -69543954 + (A)n Simple_repeat Simple_repeat 1 24 0 5 844 364 19 0 36 chr15 33951514 33951569 -69543405 + (TTTG)n Simple_repeat Simple_repeat 1 53 0 5 844 672 177 15 8 chr15 33951569 33951700 -69543274 - B1_Mur1 SINE Alu -13 136 5 5 844 295 286 0 21 chr15 33951979 33952072 -69542902 - MER3 DNA MER1_type -77 132 42 5 844 376 287 119 32 chr15 33952160 33952286 -69542688 + B3 SINE B2 2 138 -78 5 844 281 169 169 0 chr15 33952287 33952346 -69542628 + ORR1D1 LTR MaLR 2 70 -304 5 844 255 154 0 0 chr15 33952721 33952786 -69542188 + T-rich Low_complexity Low_complexity 1 65 0 5 844 1121 69 14 0 chr15 33952787 33952931 -69542043 - B1_Mus2 SINE Alu 0 147 2 5 844 829 289 66 106 chr15 33953229 33953336 -69541638 + MTE2a LTR MaLR 1 106 -315 5 844 396 0 0 0 chr15 33953336 33953380 -69541594 + (TTA)n Simple_repeat Simple_repeat 2 45 0 5 844 762 226 0 0 chr15 33953380 33953517 -69541457 - B1_Mur2 SINE Alu -12 137 1 5 844 829 279 36 92 chr15 33953517 33953837 -69541137 + MTE2a LTR MaLR 75 373 -6 5 844 1763 158 70 33 chr15 33954154 33954513 -69540461 - ORR1D1 LTR MaLR -2 372 1 5 844 1486 217 60 14 chr15 33954705 33955056 -69539918 - ORR1D2 LTR MaLR -3 367 1 5 844 625 213 146 91 chr15 33955349 33955602 -69539372 + RLTR11A LTR ERVK 1 267 -261 5 844 1531 39 0 6 chr15 33955858 33956041 -69538933 + B2_Mm1t SINE B2 2 183 -10 5 844 1092 299 26 35 chr15 33956782 33956881 -69538093 - RodERV21-int LTR ERV1 -202 4789 4696 5 844 2609 142 37 47 chr15 33956881 33957368 -69537606 - RLTR45 LTR ERVK 0 482 1 5 844 1092 299 26 35 chr15 33957368 33957695 -69537279 - RodERV21-int LTR ERV1 -296 4695 4367 5 844 2286 319 37 34 chr15 33957949 33958912 -69536062 - RodERV21-int LTR ERV1 -728 4263 3299 5 844 4238 153 127 78 chr15 33958912 33959388 -69535586 - RLTR13D2 LTR ERVK 0 1023 609 5 844 1138 55 7 20 chr15 33959388 33959536 -69535438 + B1_Mus2 SINE Alu 1 146 -1 5 844 4238 153 127 78 chr15 33959536 33960034 -69534940 - RLTR13D2 LTR ERVK -415 608 1 5 844 2286 319 37 34 chr15 33960034 33960167 -69534807 - RodERV21-int LTR ERV1 -1693 3298 3164 5 844 7446 64 22 20 chr15 33960837 33961815 -69533159 - L1_Mus2 LINE L1 0 6566 5587 5 844 271 237 52 29 chr15 33962064 33962167 -69532807 - RLTR6-int LTR ERV1 -2734 5044 4979 5 844 272 301 50 40 chr15 33962649 33962871 -69532103 - RodERV21-int LTR ERV1 -1988 5103 4880 5 844 4201 58 0 0 chr15 33963650 33964164 -69530810 - L1Md_F2 LINE L1 -482 6100 5587 5 844 3487 80 36 4 chr15 33964166 33964642 -69530332 + L1Md_F2 LINE L1 6092 6582 0 5 844 819 0 0 0 chr15 33964646 33964737 -69530237 + (GAA)n Simple_repeat Simple_repeat 2 92 0 5 844 323 295 63 95 chr15 33964737 33964937 -69530037 - RodERV21-int LTR ERV1 -3037 4054 3859 5 844 4207 125 37 74 chr15 33964937 33965776 -69529198 + RMER17D2 LTR ERVK 2 809 0 5 844 323 295 63 95 chr15 33965776 33965953 -69529021 - RodERV21-int LTR ERV1 -3233 3858 3689 5 844 1358 85 37 5 chr15 33966026 33966215 -69528759 - B2_Mm2 SINE B2 0 195 1 6 844 1477 257 34 48 chr15 33966379 33966820 -69528154 - RodERV21-int LTR ERV1 -2273 2718 2284 5 844 186 43 0 0 chr15 33966888 33966911 -69528063 + (CAG)n Simple_repeat Simple_repeat 3 25 0 6 844 3200 84 33 0 chr15 33967631 33968061 -69526913 - L1_Mus3 LINE L1 -678 5205 4762 6 844 7769 86 15 1 chr15 33968060 33969449 -69525525 + L1_Mus3 LINE L1 5229 6638 0 6 844 516 146 0 0 chr15 33969963 33970052 -69524922 + (TCCC)n Simple_repeat Simple_repeat 2 90 0 6 844 296 206 0 16 chr15 33970320 33970384 -69524590 + RMER6B LTR ERVK 368 430 -31 6 844 216 171 0 0 chr15 33971199 33971240 -69523734 + C-rich Low_complexity Low_complexity 1 41 0 6 844 959 140 17 12 chr15 33971449 33971622 -69523352 + LTRIS3 LTR ERV1 339 512 0 6 844 1196 68 0 0 chr15 33971739 33971887 -69523087 + B1_Mus1 SINE Alu 1 148 0 6 844 422 281 46 80 chr15 33971956 33972107 -69522867 + RSINE1 SINE B4 17 162 -3 6 844 243 0 0 0 chr15 33972177 33972204 -69522770 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 6 844 1109 75 6 6 chr15 33972204 33972364 -69522610 - B2_Mm1t SINE B2 -33 160 1 6 844 1132 63 7 0 chr15 33972404 33972547 -69522427 + B1_Mm SINE Alu 1 144 -3 6 844 450 0 0 0 chr15 33972547 33972597 -69522377 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 6 844 344 250 17 6 chr15 33972807 33972984 -69521990 + GA-rich Low_complexity Low_complexity 2 180 0 6 844 286 91 36 0 chr15 33973332 33973387 -69521587 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 844 405 0 0 0 chr15 33973527 33973572 -69521402 + (TGGA)n Simple_repeat Simple_repeat 3 47 0 6 844 270 306 139 64 chr15 33973597 33973880 -69521094 - MLT2B4 LTR ERVL -56 500 109 6 844 29 28 0 0 chr15 33974120 33974156 -69520818 + AT_rich Low_complexity Low_complexity 1 36 0 6 844 945 116 6 84 chr15 33974165 33974194 -69520780 + B2_Mm1t SINE B2 15 34 -159 6 844 1662 31 5 0 chr15 33974194 33974385 -69520589 + B2_Mm1t SINE B2 2 193 0 6 844 945 116 6 84 chr15 33974385 33974534 -69520440 + B2_Mm1t SINE B2 35 179 -14 6 844 295 111 324 35 chr15 33974600 33974711 -69520263 + B2_Mm2 SINE B2 47 189 -6 6 844 423 219 29 0 chr15 33974729 33974834 -69520140 + PB1D9 SINE Alu 11 118 -2 6 844 677 165 87 36 chr15 33974976 33975114 -69519860 - B1_Mm SINE Alu -1 146 2 6 844 228 86 0 0 chr15 33975139 33975174 -69519800 + (TATG)n Simple_repeat Simple_repeat 2 36 0 6 844 298 313 30 0 chr15 33975346 33975445 -69519529 + B4A SINE B4 20 121 -171 6 844 468 0 0 0 chr15 33975445 33975497 -69519477 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 844 1812 174 27 79 chr15 33975497 33975903 -69519071 - RLTR41 LTR ERV1 0 446 62 6 844 205 244 0 0 chr15 33975949 33975990 -69518984 + G-rich Low_complexity Low_complexity 2 42 0 6 844 414 0 0 0 chr15 33976163 33976209 -69518765 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 844 435 285 44 51 chr15 33977139 33977276 -69517698 + B1_Mur1 SINE Alu 14 149 0 6 844 526 263 0 9 chr15 33977310 33977425 -69517549 - RSINE1 SINE B4 -39 126 13 6 844 764 47 19 0 chr15 33977815 33977922 -69517052 - B1_Mm SINE Alu -2 145 37 6 844 367 161 0 24 chr15 33977933 33978016 -69516958 - MER53 DNA hAT -112 81 1 6 844 739 190 223 6 chr15 33978518 33978693 -69516281 - B3 SINE B2 -1 215 3 6 844 350 91 18 0 chr15 33978867 33978922 -69516052 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 844 494 16 16 0 chr15 33978929 33978992 -69515982 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 844 370 138 7 10 chr15 33979180 33979253 -69515721 + PB1D9 SINE Alu 1 72 -45 6 844 576 201 45 0 chr15 33980011 33980145 -69514829 + ORR1D1 LTR MaLR 1 140 -234 6 844 1812 201 87 6 chr15 33980145 33980501 -69514473 + Lx7 LINE L1 6775 7159 -537 6 844 12795 60 11 1 chr15 33980835 33982388 -69512586 - MuRRS4-int LTR ERV1 -1046 4017 2450 6 844 3228 156 8 8 chr15 33982385 33982883 -69512091 - MuRRS4-int LTR ERV1 -4287 776 279 6 844 1912 144 214 8 chr15 33983279 33983649 -69511325 + RLTR41 LTR ERV1 1 446 0 6 844 1557 194 206 39 chr15 33983864 33984321 -69510653 - RMER16 LTR ERVK 0 533 1 6 844 344 267 34 17 chr15 33984541 33984659 -69510315 + B1F SINE Alu 21 140 -9 6 844 254 250 16 0 chr15 33984693 33984757 -69510217 + ID4_ SINE ID 9 73 -10 6 844 226 205 0 0 chr15 33984759 33984798 -69510176 + polypurine Low_complexity Low_complexity 1 39 0 6 844 312 319 117 8 chr15 33985079 33985199 -69509775 - RSINE1 SINE B4 -21 144 12 6 844 627 188 0 17 chr15 33985297 33985416 -69509558 - B1F SINE Alu -29 120 4 6 844 236 245 0 0 chr15 33985373 33985422 -69509552 - B4 SINE B4 -161 131 83 6 844 1174 82 0 0 chr15 33985506 33985653 -69509321 + B1_Mus1 SINE Alu 1 147 -1 6 844 1678 132 137 13 chr15 33985906 33986221 -69508753 + ORR1B2 LTR MaLR 1 354 -13 6 844 282 95 0 0 chr15 33986239 33986281 -69508693 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 844 701 243 13 0 chr15 33986545 33986697 -69508277 + B4A SINE B4 138 291 -1 6 844 576 111 0 0 chr15 33986702 33986810 -69508164 + (GA)n Simple_repeat Simple_repeat 1 108 0 6 844 351 105 0 0 chr15 33986813 33986870 -69508104 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 844 280 191 63 0 chr15 33987434 33987497 -69507477 + RSINE1 SINE B4 53 119 -46 6 844 423 155 0 0 chr15 33987497 33987600 -69507374 + CT-rich Low_complexity Low_complexity 1 103 0 6 844 344 259 146 73 chr15 33987737 33988024 -69506950 - HAL1b LINE L1 -425 1584 1277 6 844 311 143 54 0 chr15 33988648 33988704 -69506270 + PB1D10 SINE Alu 53 111 -6 6 844 327 118 0 0 chr15 33988659 33988710 -69506264 + ID_B1 SINE B4 174 224 0 6 844 1066 88 0 0 chr15 33988727 33988863 -69506111 + B1_Mus2 SINE Alu 1 136 -11 6 844 207 0 0 0 chr15 33988863 33988886 -69506088 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 6 844 567 248 54 115 chr15 33989969 33990229 -69504745 + MER2 DNA MER2_type 87 330 -15 6 844 1846 198 15 73 chr15 33990867 33991335 -69503639 - BGLII_B LTR ERVK 0 441 1 6 844 3902 65 52 2 chr15 33991371 33991876 -69503098 + L1_Mus2 LINE L1 6037 6566 0 6 844 1934 199 17 14 chr15 33991881 33992045 -69502929 - MYSERV16_I-int LTR ERVK -19 2307 2147 6 844 1070 78 14 0 chr15 33992045 33992186 -69502788 + B1_Mus1 SINE Alu 1 143 -5 6 844 1934 199 17 14 chr15 33992186 33992440 -69502534 - MYSERV16_I-int LTR ERVK -180 2146 1888 6 844 330 26 0 0 chr15 33992896 33992935 -69502039 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 844 593 338 23 9 chr15 33993495 33993710 -69501264 - ID_B1 SINE B4 -1 223 6 6 844 1365 87 22 0 chr15 33993717 33993902 -69501072 - B2_Mm2 SINE B2 -6 189 1 6 844 1228 54 0 0 chr15 33994007 33994154 -69500820 + B1_Mus2 SINE Alu 1 147 0 6 844 954 50 0 0 chr15 33994154 33994274 -69500700 + (GAGAA)n Simple_repeat Simple_repeat 4 123 0 6 844 801 199 7 0 chr15 33995187 33995328 -69499646 + B1_Mus2 SINE Alu 5 146 -1 6 844 515 267 7 20 chr15 33995394 33995543 -69499431 + MLT1B LTR MaLR 201 347 -43 6 844 612 68 67 19 chr15 33995739 33995844 -69499130 + B1_Mus1 SINE Alu 37 146 -2 6 844 1172 68 0 26 chr15 33996279 33996430 -69498544 + B1_Mus2 SINE Alu 1 147 0 6 844 258 220 17 0 chr15 33996619 33996678 -69498296 + GA-rich Low_complexity Low_complexity 2 61 0 6 844 2293 111 17 76 chr15 33996679 33997098 -69497876 - RLTR23 LTR ERV1 -36 394 1 6 844 345 312 0 35 chr15 33997587 33997703 -69497271 + PB1D10 SINE Alu 1 112 -5 6 844 742 176 14 0 chr15 33997737 33997879 -69497095 + B1_Mur4 SINE Alu 7 150 0 6 844 1637 152 114 12 chr15 33997963 33998296 -69496678 + RMER10B LTR ERVL 32 398 0 6 844 737 295 96 24 chr15 33998332 33998665 -69496309 - MLT1E1A-int LTR MaLR -1131 358 2 6 844 298 312 139 65 chr15 33998671 33998817 -69496157 - MLT1E1A LTR MaLR -3 677 507 6 844 3936 83 21 30 chr15 33998817 33999388 -69495586 - RMER2 LTR ERV1 -1 566 1 6 844 298 312 139 65 chr15 33999388 33999471 -69495503 - MLT1E1A LTR MaLR -174 506 432 6 844 720 141 0 30 chr15 33999528 33999660 -69495314 - B1_Mus1 SINE Alu -20 128 1 6 844 33 0 0 0 chr15 33999815 33999848 -69495126 + AT_rich Low_complexity Low_complexity 1 33 0 6 844 189 293 0 24 chr15 34000058 34000100 -69494874 - L2b LINE L2 -69 3306 3266 1 844 185 422 71 50 chr15 34000076 34000149 -69494825 - L2b LINE L2 -70 3317 3251 1 844 617 254 7 0 chr15 34000149 34000291 -69494683 + B1_Mur1 SINE Alu 2 144 -5 2 844 185 422 71 50 chr15 34000291 34000499 -69494475 - L2b LINE L2 -137 3250 3030 1 844 331 289 38 38 chr15 34000742 34000875 -69494099 - LTR16A LTR ERVL -12 439 307 3 844 639 191 31 8 chr15 34001190 34001317 -69493657 - B1_Mur2 SINE Alu -1 148 19 4 844 234 0 0 0 chr15 34001345 34001371 -69493603 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 5 844 364 239 214 33 chr15 34001547 34001729 -69493245 - B3 SINE B2 0 216 2 6 844 394 289 79 75 chr15 34001741 34002007 -69492967 + ORR1E LTR MaLR 15 337 -42 7 844 449 192 0 8 chr15 34002009 34002135 -69492839 + GA-rich Low_complexity Low_complexity 1 125 0 8 844 655 169 62 56 chr15 34002138 34002282 -69492692 - B1_Mur1 SINE Alu 0 149 5 9 844 238 111 0 0 chr15 34002286 34002320 -69492654 + ORR1E LTR MaLR 339 372 -7 7 844 407 309 125 0 chr15 34002320 34002456 -69492518 + RSINE1 SINE B4 1 153 -12 1 844 38 0 0 0 chr15 34002459 34002497 -69492477 + AT_rich Low_complexity Low_complexity 1 38 0 1 844 682 269 52 56 chr15 34002556 34002769 -69492205 - B3 SINE B2 -3 213 2 1 844 276 310 11 0 chr15 34002769 34002839 -69492135 - PB1D10 SINE Alu -41 76 6 1 844 497 218 18 82 chr15 34003160 34003330 -69491644 + MTEb LTR MaLR 2 160 -219 1 844 3717 202 28 28 chr15 34003185 34004084 -69490890 - RMER17B LTR ERVK -123 835 1 1 844 327 200 58 91 chr15 34004084 34004162 -69490812 + MTEb LTR MaLR 306 379 0 1 844 736 262 22 27 chr15 34004611 34004795 -69490179 + B3 SINE B2 9 191 -25 1 844 301 324 83 0 chr15 34005055 34005163 -69489811 + Lx8 LINE L1 7191 7307 -166 1 844 495 0 0 0 chr15 34005167 34005222 -69489752 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 844 18583 83 31 13 chr15 34005473 34007765 -69487209 + L1VL4 LINE L1 189 2546 -1013 1 844 1130 102 0 0 chr15 34007765 34007912 -69487062 + B1_Mus2 SINE Alu 1 147 0 2 844 18583 75 17 16 chr15 34007912 34008379 -69486595 + L1VL4 LINE L1 2547 2986 -573 1 844 2752 58 3 0 chr15 34008379 34008724 -69486250 - ORR1A1 LTR MaLR 0 346 1 2 844 18583 75 17 16 chr15 34008724 34009286 -69485688 + L1VL4 LINE L1 2987 3559 0 1 844 863 245 125 53 chr15 34009384 34009703 -69485271 + ORR1E LTR MaLR 7 348 -11 2 844 437 246 8 34 chr15 34009716 34009834 -69485140 - PB1D10 SINE Alu 0 117 3 2 844 30 45 0 0 chr15 34009845 34009889 -69485085 + AT_rich Low_complexity Low_complexity 1 44 0 2 844 958 159 64 0 chr15 34009889 34010046 -69484928 - B2_Mm2 SINE B2 -28 167 1 2 844 1449 72 0 25 chr15 34010050 34010249 -69484725 - B2_Mm2 SINE B2 0 195 2 2 844 282 214 173 73 chr15 34010368 34010600 -69484374 - L1ME2 LINE L1 -125 6054 5812 2 844 450 253 184 9 chr15 34010608 34010831 -69484143 + LTR65 LTR ERV1 278 539 -130 2 844 370 239 0 0 chr15 34010933 34011004 -69483970 + ID4 SINE ID 2 72 -11 2 844 198 0 0 0 chr15 34011116 34011138 -69483836 + (A)n Simple_repeat Simple_repeat 1 22 0 3 844 331 256 0 35 chr15 34011664 34011749 -69483225 - ID4 SINE ID 0 83 2 3 844 617 276 13 26 chr15 34013969 34014125 -69480849 - RSINE1 SINE B4 0 165 12 3 844 563 195 127 0 chr15 34014192 34014310 -69480664 + B1_Mus1 SINE Alu 7 139 -9 3 844 1136 81 0 0 chr15 34015105 34015253 -69479721 - B1_Mus1 SINE Alu 0 148 1 3 844 763 246 30 5 chr15 34015699 34015899 -69479075 + ID_B1 SINE B4 1 205 -19 3 844 353 257 36 9 chr15 34015930 34016040 -69478934 + MER2 DNA MER2_type 87 199 -146 3 844 215 416 0 29 chr15 34016411 34016515 -69478459 + MER5B DNA MER1_type 16 116 -62 3 844 350 274 42 10 chr15 34016538 34016634 -69478340 - PB1 SINE Alu -28 99 1 3 844 249 128 0 0 chr15 34016636 34016683 -69478291 + (T)n Simple_repeat Simple_repeat 1 47 0 3 844 1229 21 0 0 chr15 34016684 34016826 -69478148 - B1_Mus1 SINE Alu -6 142 1 4 844 775 228 0 0 chr15 34016944 34017080 -69477894 - B1_Mur2 SINE Alu -7 142 7 4 844 480 312 0 64 chr15 34017080 34017112 -69477862 - ID_B1 SINE B4 -4 217 61 4 844 267 242 118 21 chr15 34017178 34017271 -69477703 + PB1D10 SINE Alu 1 102 -15 4 844 264 318 14 43 chr15 34017449 34017518 -69477456 - B4A SINE B4 -4 288 222 4 844 651 229 179 0 chr15 34017522 34017701 -69477273 - B3 SINE B2 -5 211 1 4 844 23 68 0 0 chr15 34017723 34017767 -69477207 + AT_rich Low_complexity Low_complexity 1 44 0 4 844 1244 80 23 0 chr15 34017863 34018038 -69476936 + B2_Mm2 SINE B2 2 180 -15 4 844 281 152 133 61 chr15 34018112 34018210 -69476764 - Lx7 LINE L1 -387 7309 7205 4 844 852 139 28 28 chr15 34018221 34018362 -69476612 - B1_Mus1 SINE Alu 0 148 8 4 844 1701 247 94 40 chr15 34018381 34018904 -69476070 - Lx8 LINE L1 -44 7429 6879 5 844 379 147 13 26 chr15 34018926 34019003 -69475971 - Lx8 LINE L1 -652 6821 6746 5 844 791 208 7 7 chr15 34019272 34019417 -69475557 - B1_Mur4 SINE Alu 0 150 6 5 844 210 91 0 0 chr15 34019579 34019612 -69475362 + (CATTT)n Simple_repeat Simple_repeat 3 35 0 5 844 1181 124 27 5 chr15 34020131 34020317 -69474657 - B2_Mm2 SINE B2 -3 192 3 5 844 353 325 16 33 chr15 34020498 34020533 -69474441 + ID SINE ID 51 83 -141 5 844 294 299 30 20 chr15 34020533 34020632 -69474342 + PB1D10 SINE Alu 1 100 -17 5 844 350 220 35 0 chr15 34020994 34021074 -69473900 + B3 SINE B2 44 128 -70 5 844 248 293 17 0 chr15 34021168 34021226 -69473748 - tRNA-Ala-GCY_ tRNA tRNA -15 60 2 5 844 463 279 134 18 chr15 34021283 34021447 -69473527 + B3A SINE B2 1 183 -15 5 844 979 161 71 16 chr15 34021504 34021687 -69473287 + B2_Mm2 SINE B2 3 195 0 5 844 660 191 0 139 chr15 34021850 34022008 -69472966 - B1_Mur4 SINE Alu -7 143 8 6 844 210 71 0 0 chr15 34022084 34022112 -69472862 + (TTTC)n Simple_repeat Simple_repeat 3 30 0 6 844 431 245 71 0 chr15 34022213 34022311 -69472663 + Lx5 LINE L1 6667 6771 -279 6 844 1319 68 0 28 chr15 34022311 34022331 -69472643 - B2_Mm1t SINE B2 -17 176 161 6 844 279 0 0 0 chr15 34022331 34022362 -69472612 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 6 844 1319 68 0 28 chr15 34022362 34022522 -69472452 - B2_Mm1t SINE B2 -33 160 1 6 844 864 251 92 12 chr15 34022523 34022773 -69472201 + Lx6 LINE L1 7148 7417 -43 6 844 194 33 67 0 chr15 34023837 34023867 -69471107 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 6 844 524 211 85 125 chr15 34023874 34024078 -69470896 - B4A SINE B4 0 224 3 6 844 180 0 0 0 chr15 34024127 34024147 -69470827 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 6 844 1139 51 0 0 chr15 34024148 34024285 -69470689 - B1_Mus1 SINE Alu -10 138 2 6 844 348 262 9 46 chr15 34024383 34024415 -69470559 - ID_B1 SINE B4 -120 104 1 7 844 566 92 0 0 chr15 34024415 34024491 -69470483 - BC1_Mm scRNA scRNA -76 76 1 7 844 608 273 15 15 chr15 34024736 34024866 -69470108 - B1_Mur1 SINE Alu -5 144 15 7 844 189 312 140 44 chr15 34025189 34025303 -69469671 - MIRc SINE MIR -49 219 95 7 844 584 299 7 36 chr15 34025316 34025455 -69469519 + RSINE1 SINE B4 3 137 -28 7 844 225 0 0 0 chr15 34025455 34025480 -69469494 + (TCTCC)n Simple_repeat Simple_repeat 2 26 0 7 844 243 88 0 0 chr15 34025474 34025508 -69469466 + (TCCC)n Simple_repeat Simple_repeat 1 34 0 7 844 1326 70 26 21 chr15 34025633 34025824 -69469150 - B2_Mm1t SINE B2 0 193 2 7 844 293 283 18 54 chr15 34026184 34026296 -69468678 + PB1D9 SINE Alu 2 109 -11 7 844 309 327 84 0 chr15 34026493 34026600 -69468374 + PB1D10 SINE Alu 1 116 -1 7 844 1225 98 17 0 chr15 34026889 34027062 -69467912 - B2_Mm2 SINE B2 0 195 20 8 844 646 179 249 0 chr15 34027254 34027427 -69467547 - B3 SINE B2 0 216 1 8 844 345 282 66 13 chr15 34027482 34027633 -69467341 - Lx7 LINE L1 -4 7692 7534 8 844 312 270 27 0 chr15 34028175 34028249 -69466725 + MER58B DNA MER1_type 251 326 -15 8 844 363 182 40 129 chr15 34028265 34028366 -69466608 + PB1D9 SINE Alu 29 120 0 8 844 529 276 85 35 chr15 34028381 34028586 -69466388 + B3A SINE B2 5 212 -4 8 844 637 255 35 29 chr15 34028843 34029013 -69465961 + B3 SINE B2 36 206 -10 8 844 377 186 171 81 chr15 34029805 34029916 -69465058 + RSINE1 SINE B4 17 137 -28 8 844 683 234 57 28 chr15 34029928 34030104 -69464870 - B3A SINE B2 -16 182 2 8 844 24 0 0 0 chr15 34030296 34030320 -69464654 + AT_rich Low_complexity Low_complexity 1 24 0 8 844 279 281 0 0 chr15 34030322 34030379 -69464595 - ID_B1 SINE B4 -86 138 82 9 844 264 73 17 52 chr15 34030518 34030576 -69464398 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 9 844 685 175 9 9 chr15 34030577 34030692 -69464282 - B1_Mus1 SINE Alu 0 148 34 9 844 715 197 22 0 chr15 34030862 34030999 -69463975 + B1_Mur2 SINE Alu 2 141 -8 9 844 778 236 39 39 chr15 34031577 34031758 -69463216 + Charlie1a DNA MER1_type 1 181 -1274 9 844 1187 169 107 4 chr15 34031759 34032002 -69462972 + Lx5 LINE L1 6738 7005 -45 9 844 332 250 98 77 chr15 34032065 34032208 -69462766 + Charlie1a DNA MER1_type 165 310 -1145 9 844 493 295 60 67 chr15 34032237 34032386 -69462588 - RSINE1 SINE B4 -6 159 12 9 844 892 282 130 17 chr15 34032382 34032735 -69462239 + Charlie1a DNA MER1_type 321 713 -742 9 844 1221 27 0 7 chr15 34032768 34032916 -69462058 - B1_Mus2 SINE Alu 0 147 1 9 844 664 241 0 58 chr15 34032958 34033112 -69461862 + ID_B1 SINE B4 80 224 0 9 844 370 220 95 60 chr15 34033192 34033308 -69461666 + PB1D9 SINE Alu 1 120 0 9 844 291 54 0 0 chr15 34033595 34033632 -69461342 + (TTTCC)n Simple_repeat Simple_repeat 3 39 0 1 844 1374 166 154 7 chr15 34033987 34034267 -69460707 - ORR1A4 LTR MaLR -8 321 1 1 844 650 219 0 0 chr15 34034267 34034381 -69460593 + PB1D9 SINE Alu 7 120 0 1 844 334 263 10 31 chr15 34034514 34034612 -69460362 + Charlie1a DNA MER1_type 980 1075 -380 9 844 281 241 0 0 chr15 34034613 34034667 -69460307 + ID4 SINE ID 13 66 -17 1 844 258 262 12 59 chr15 34034670 34034755 -69460219 + Charlie1a DNA MER1_type 1055 1135 -320 9 844 420 20 0 0 chr15 34035326 34035375 -69459599 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 844 559 222 34 14 chr15 34035388 34035534 -69459440 - B1_Mur2 SINE Alu 0 149 1 1 844 297 0 0 0 chr15 34035535 34035568 -69459406 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 844 231 250 31 15 chr15 34035726 34035791 -69459183 + B1F2 SINE Alu 2 67 -82 1 844 204 40 0 0 chr15 34035968 34035993 -69458981 + (T)n Simple_repeat Simple_repeat 1 25 0 1 844 1157 82 0 0 chr15 34035993 34036140 -69458834 - B1_Mus2 SINE Alu 0 147 1 1 844 758 260 14 39 chr15 34037046 34037254 -69457720 - B3 SINE B2 -11 205 3 1 844 461 311 25 8 chr15 34037322 34037442 -69457532 - B4A SINE B4 -167 125 4 1 844 202 0 29 57 chr15 34037457 34037492 -69457482 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 1 844 931 233 173 0 chr15 34037567 34037816 -69457158 + Lx6 LINE L1 7155 7446 -14 1 844 562 287 113 25 chr15 34037999 34038316 -69456658 - L1MA5 LINE L1 -1 6299 5949 1 844 1344 76 21 11 chr15 34038316 34038503 -69456471 - B2_Mm2 SINE B2 -6 189 1 1 844 562 287 113 25 chr15 34038503 34038549 -69456425 - L1MA5 LINE L1 -352 5948 5904 1 844 295 190 60 60 chr15 34038532 34038616 -69456358 - L1MA5 LINE L1 -595 5696 5613 1 844 3195 33 2 0 chr15 34038618 34039074 -69455900 + L1Md_F2 LINE L1 5494 5950 -632 1 844 849 149 223 16 chr15 34039075 34039259 -69455715 - RMER20A LTR ERVK -293 223 2 1 844 781 186 44 29 chr15 34039270 34039475 -69455499 - L1MA5 LINE L1 -813 5487 5280 1 844 2301 232 109 20 chr15 34040235 34040847 -69454127 - Lx8 LINE L1 -378 7095 6429 1 844 182 365 45 45 chr15 34040931 34041043 -69453931 + MIRc SINE MIR 40 151 -117 1 844 409 232 25 209 chr15 34041078 34041356 -69453618 + MER33 DNA MER1_type 14 240 -84 1 844 827 314 63 30 chr15 34041976 34042308 -69452666 - MER2 DNA MER2_type -1 344 2 1 844 1195 48 0 0 chr15 34042429 34042575 -69452399 - B1_Mus1 SINE Alu 0 148 3 1 844 23 0 0 0 chr15 34042725 34042748 -69452226 + AT_rich Low_complexity Low_complexity 1 23 0 1 844 485 248 64 0 chr15 34042748 34042857 -69452117 + ID_B1 SINE B4 107 222 -2 1 844 246 250 188 34 chr15 34043275 34043424 -69451550 + MIRb SINE MIR 26 197 -71 1 844 1093 60 0 0 chr15 34043424 34043557 -69451417 + B1_Mus1 SINE Alu 1 133 -15 1 844 184 30 61 0 chr15 34045368 34045401 -69449573 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 844 1292 81 32 5 chr15 34046693 34046879 -69448095 - B2_Mm2 SINE B2 -3 192 2 1 844 207 0 0 0 chr15 34046955 34046978 -69447996 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 1 844 252 0 0 0 chr15 34046978 34047005 -69447969 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 844 426 53 0 0 chr15 34047005 34047061 -69447913 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 844 218 309 73 21 chr15 34047066 34047162 -69447812 - MER5B DNA MER1_type -61 117 17 1 844 378 248 87 19 chr15 34047346 34047449 -69447525 + PB1D10 SINE Alu 1 110 -7 1 844 341 243 200 27 chr15 34047968 34048078 -69446896 + ID_B1 SINE B4 81 209 -15 1 844 708 68 0 0 chr15 34048089 34048192 -69446782 + (CA)n Simple_repeat Simple_repeat 2 104 0 1 844 1087 95 105 12 chr15 34048373 34048544 -69446430 - B2_Mm2 SINE B2 -7 188 2 1 844 344 329 81 40 chr15 34049240 34049487 -69445487 - L1M5 LINE L1 -572 5552 5296 1 844 206 164 14 43 chr15 34049501 34049518 -69445456 + A-rich Low_complexity Low_complexity 1 17 0 1 844 1192 61 0 0 chr15 34049518 34049665 -69445309 + B1_Mus2 SINE Alu 1 147 0 1 844 206 164 14 43 chr15 34049665 34049717 -69445257 + A-rich Low_complexity Low_complexity 18 68 0 1 844 24 0 0 0 chr15 34049729 34049753 -69445221 + AT_rich Low_complexity Low_complexity 1 24 0 1 844 459 265 90 15 chr15 34049760 34049894 -69445080 - B1_Mur1 SINE Alu 0 149 6 1 844 272 326 39 59 chr15 34049894 34049912 -69445062 - ID_B1 SINE B4 -2 221 73 1 844 217 272 185 0 chr15 34050968 34051049 -69443925 + MIRb SINE MIR 165 260 -8 1 844 1078 126 175 16 chr15 34051513 34051707 -69443267 - URR1B DNA MER1_type 0 225 1 1 844 419 243 43 51 chr15 34052013 34052130 -69442844 - MER58B DNA MER1_type -26 315 200 1 844 251 356 125 0 chr15 34052148 34052252 -69442722 - MER58B DNA MER1_type -223 118 2 1 844 324 0 0 0 chr15 34053946 34053982 -69440992 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 844 217 278 61 17 chr15 34053985 34054102 -69440872 + B1_Mur2 SINE Alu 3 115 -5 1 844 32 43 0 0 chr15 34054310 34054356 -69440618 + AT_rich Low_complexity Low_complexity 1 46 0 1 844 361 238 9 38 chr15 34054480 34054585 -69440389 - PB1D9 SINE Alu -18 102 1 1 844 312 328 88 31 chr15 34054665 34054857 -69440117 - MIR SINE MIR -19 243 41 1 844 810 152 16 7 chr15 34055127 34055272 -69439702 + B1_Mus1 SINE Alu 2 148 0 1 844 238 265 20 0 chr15 34055340 34055389 -69439585 - B1F1 SINE Alu -99 50 1 1 844 1018 78 35 21 chr15 34055444 34055589 -69439385 + B1_Mus1 SINE Alu 2 148 0 1 844 464 320 66 0 chr15 34055997 34056119 -69438855 + RSINE1 SINE B4 3 132 -33 1 844 725 219 101 0 chr15 34056186 34056364 -69438610 + B3A SINE B2 1 196 -2 1 844 784 154 28 35 chr15 34056376 34056517 -69438457 + B1_Mur4 SINE Alu 5 144 -6 1 844 283 310 57 57 chr15 34056591 34056697 -69438277 + ID_B1 SINE B4 114 219 -5 1 844 465 353 16 21 chr15 34056972 34057163 -69437811 - MT2A LTR ERVL -160 373 184 1 844 379 147 39 39 chr15 34057444 34057522 -69437452 + B1_Mur3 SINE Alu 46 123 -26 1 844 221 146 19 94 chr15 34057598 34057651 -69437323 + ID SINE ID 9 57 -167 1 844 868 188 206 0 chr15 34058405 34058575 -69436399 + B3 SINE B2 1 205 -11 1 844 317 222 49 0 chr15 34058623 34058704 -69436270 + PB1D9 SINE Alu 34 118 -2 1 844 201 74 0 0 chr15 34059231 34059258 -69435716 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 844 255 61 0 0 chr15 34059529 34059562 -69435412 + (A)n Simple_repeat Simple_repeat 1 33 0 1 844 28 61 0 0 chr15 34059884 34059933 -69435041 + AT_rich Low_complexity Low_complexity 1 49 0 1 844 610 291 89 20 chr15 34060030 34060276 -69434698 - MT2A LTR ERVL 0 533 271 1 844 796 58 42 0 chr15 34060348 34060468 -69434506 + (GGAAA)n Simple_repeat Simple_repeat 5 129 0 1 844 380 206 0 0 chr15 34061201 34061269 -69433705 + tRNA-Ala-GCY_ tRNA tRNA 1 68 -7 1 844 712 189 194 28 chr15 34061339 34061519 -69433455 + B3 SINE B2 1 210 -6 1 844 324 308 69 101 chr15 34061780 34061968 -69433006 + B4 SINE B4 37 218 -74 1 844 226 278 0 111 chr15 34062195 34062276 -69432698 + ID SINE ID 12 83 -141 1 844 276 282 0 25 chr15 34062207 34062287 -69432687 + BC1_Mm scRNA scRNA 16 93 -59 1 844 3352 67 7 2 chr15 34062287 34062723 -69432251 + L1_Mus2 LINE L1 6129 6566 0 1 844 217 273 76 0 chr15 34062929 34062995 -69431979 - PB1D10 SINE Alu -10 107 37 1 844 2703 185 175 3 chr15 34062996 34063608 -69431366 - RMER1A Other Other -3 1027 311 1 844 280 260 160 0 chr15 34063622 34063722 -69431252 - RMER1B Other Other -582 484 369 1 844 1237 34 0 0 chr15 34063781 34063928 -69431046 - B1_Mus2 SINE Alu 0 147 1 1 844 188 135 0 26 chr15 34064099 34064137 -69430837 + GA-rich Low_complexity Low_complexity 2 38 0 1 844 489 243 45 0 chr15 34064324 34064435 -69430539 - B3 SINE B2 -91 125 10 1 844 25 31 0 0 chr15 34064518 34064550 -69430424 + AT_rich Low_complexity Low_complexity 1 32 0 1 844 674 291 8 80 chr15 34065136 34065375 -69429599 + B4A SINE B4 8 229 -63 1 844 258 32 0 0 chr15 34065581 34065612 -69429362 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 844 430 194 69 53 chr15 34065612 34065743 -69429231 - RSINE1 SINE B4 0 165 33 1 844 21 0 0 0 chr15 34066052 34066073 -69428901 + AT_rich Low_complexity Low_complexity 1 21 0 1 844 528 279 0 9 chr15 34066200 34066312 -69428662 - PB1D7 SINE Alu -9 111 1 1 844 599 173 10 0 chr15 34066709 34066813 -69428161 + B1_Mur3 SINE Alu 1 105 -44 1 844 520 283 8 0 chr15 34067075 34067195 -69427779 - ID_B1 SINE B4 -9 215 95 1 844 299 333 11 0 chr15 34067114 34067207 -69427767 - PB1D10 SINE Alu -22 95 2 1 844 467 144 69 0 chr15 34067325 34067428 -69427546 + ORR1C2 LTR MaLR 27 162 -222 1 844 749 144 17 8 chr15 34067430 34067549 -69427425 + PB1D9 SINE Alu 1 120 0 1 844 657 136 71 8 chr15 34067560 34067686 -69427288 + ORR1C2 LTR MaLR 251 384 0 1 844 492 194 58 0 chr15 34067706 34067809 -69427165 + B3A SINE B2 1 109 -89 1 844 609 159 9 0 chr15 34069166 34069273 -69425701 - B1_Mur4 SINE Alu -37 113 6 1 844 669 200 74 0 chr15 34070213 34070348 -69424626 - B1_Mus1 SINE Alu -2 146 2 1 844 469 200 236 0 chr15 34073462 34073572 -69421402 + B1_Mur2 SINE Alu 1 136 -13 1 844 433 294 128 16 chr15 34073942 34074175 -69420799 + B4A SINE B4 7 290 -2 1 844 416 248 110 0 chr15 34074626 34074735 -69420239 - B1_Mus1 SINE Alu -18 130 10 1 844 531 0 0 0 chr15 34075184 34075243 -69419731 + (GTTTG)n Simple_repeat Simple_repeat 4 62 0 1 844 829 158 14 21 chr15 34075249 34075391 -69419583 - B1_Mus1 SINE Alu -7 141 1 1 844 301 235 353 0 chr15 34075406 34075525 -69419449 - RSINE1 SINE B4 -2 163 3 2 844 294 304 0 0 chr15 34075953 34076032 -69418942 + ID_B1 SINE B4 144 222 -2 2 844 291 253 12 3 chr15 34076285 34076366 -69418608 + BC1_Mm scRNA scRNA 1 81 -2 2 844 336 285 63 31 chr15 34076567 34076694 -69418280 + B3 SINE B2 18 148 -68 2 844 548 202 9 0 chr15 34076916 34077025 -69417949 + B3A SINE B2 5 114 -84 2 844 512 207 156 162 chr15 34077402 34077569 -69417405 - B3A SINE B2 -2 196 9 2 844 303 202 127 0 chr15 34077608 34077687 -69417287 + ID_B1 SINE B4 95 183 -41 2 844 640 244 180 32 chr15 34077724 34077974 -69417000 + B4A SINE B4 6 292 0 2 844 24 32 0 0 chr15 34078042 34078073 -69416901 + AT_rich Low_complexity Low_complexity 1 31 0 2 844 625 299 46 0 chr15 34078074 34078271 -69416703 - B3 SINE B2 -10 206 1 2 844 208 274 0 23 chr15 34078325 34078396 -69416578 + T-rich Low_complexity Low_complexity 15 84 0 2 844 1100 103 0 14 chr15 34078396 34078544 -69416430 - B1_Mus1 SINE Alu 0 148 3 2 844 208 274 0 23 chr15 34078544 34078558 -69416416 + T-rich Low_complexity Low_complexity 1 14 0 2 105 1669 36 0 0 chr15 34078558 34078750 -69416224 - B2_Mm1a SINE B2 0 193 2 2 845 400 71 0 0 chr15 34078751 34078807 -69416167 - B1_Mus1 SINE Alu -91 57 2 2 845 281 275 0 26 chr15 34078939 34079045 -69415929 - PB1D10 SINE Alu -8 109 8 2 845 363 275 0 21 chr15 34079208 34079301 -69415673 - ID_B1 SINE B4 -8 216 126 2 845 202 300 0 0 chr15 34079405 34079455 -69415519 + GA-rich Low_complexity Low_complexity 4 53 0 2 845 836 158 13 33 chr15 34079637 34079788 -69415186 - B1_Mus1 SINE Alu 0 148 1 2 845 3854 40 0 0 chr15 34079797 34080249 -69414725 - L1Md_T LINE L1 0 6582 6131 2 845 307 303 141 0 chr15 34080820 34080919 -69414055 + B1F SINE Alu 1 113 -36 2 845 538 230 89 0 chr15 34080923 34081058 -69413916 - ORR1D2 LTR MaLR -9 361 215 2 845 354 205 0 64 chr15 34081083 34081177 -69413797 + RLTR19C LTR ERVK 19 106 -400 2 845 1547 148 38 96 chr15 34081220 34081586 -69413388 + RMER10B LTR ERVL 1 345 -53 2 845 480 301 67 71 chr15 34081608 34081848 -69413126 - RLTR4_MM-int LTR ERV1 -350 7251 7013 2 845 1611 108 73 0 chr15 34082147 34082407 -69412567 - ORR1A2 LTR MaLR -8 319 41 2 845 1124 308 105 51 chr15 34083540 34085244 -69409730 - RLTR4_MM-int LTR ERV1 -2381 5397 3187 2 845 1464 334 76 54 chr15 34085289 34086906 -69408068 - RLTR4_MM-int LTR ERV1 -3999 3602 1951 2 845 3618 164 57 21 chr15 34086931 34087599 -69407375 + RLTR17 LTR ERVK 1 692 0 2 845 351 314 30 26 chr15 34087849 34088060 -69406914 - RLTR4_MM-int LTR ERV1 -5982 1624 1297 2 845 351 292 55 44 chr15 34088105 34088286 -69406688 - RLTR4_MM-int LTR ERV1 -6332 1446 1163 2 845 368 371 10 19 chr15 34088869 34089075 -69405899 - RodERV21-int LTR ERV1 -521 4470 4267 2 845 212 0 0 35 chr15 34089089 34089118 -69405856 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2 845 912 91 0 0 chr15 34089118 34089250 -69405724 - B1_Mus1 SINE Alu -10 138 7 2 845 2543 328 31 39 chr15 34089298 34090607 -69404367 - RodERV21-int LTR ERV1 -782 4209 2911 2 845 7758 49 22 20 chr15 34091017 34091994 -69402980 - L1_Mus2 LINE L1 0 6566 5588 2 845 408 310 20 15 chr15 34092025 34092349 -69402625 - MER52-int LTR ERV1 -1867 3450 3170 2 845 714 50 0 10 chr15 34092614 34092709 -69402265 + B1_Mus2 SINE Alu 42 136 -11 2 845 486 0 0 0 chr15 34092709 34092763 -69402211 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 2 845 294 313 36 36 chr15 34092974 34093199 -69401775 - MER52-int LTR ERV1 -1987 5104 4880 2 845 476 335 46 60 chr15 34094017 34094513 -69400461 - MER52-int LTR ERV1 -3017 4074 3586 2 845 730 129 86 0 chr15 34094882 34095021 -69399953 + RMER10A LTR ERVL 264 414 -28 2 845 726 198 8 0 chr15 34095021 34095147 -69399827 + ETnERV2-int LTR ERVK 7070 7196 -210 2 845 1390 141 166 0 chr15 34095630 34095913 -69399061 - ORR1C2 LTR MaLR -5 379 50 2 845 411 187 27 0 chr15 34095917 34095992 -69398982 + RSINE1 SINE B4 45 121 -44 2 845 1784 174 13 3 chr15 34095996 34096302 -69398672 + RLTR27 LTR ERVK 1 309 0 2 845 2113 72 57 83 chr15 34096373 34096709 -69398265 - ORR1A2 LTR MaLR 0 327 1 2 845 1292 87 49 0 chr15 34096749 34096932 -69398042 + B2_Mm2 SINE B2 1 192 -3 2 845 714 263 3 8 chr15 34096932 34097131 -69397843 - B3A SINE B2 -20 196 1 2 845 621 252 0 7 chr15 34097313 34097449 -69397525 - B1_Mus2 SINE Alu -12 135 1 2 845 183 42 0 0 chr15 34097803 34097827 -69397147 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 845 397 238 25 0 chr15 34097827 34097907 -69397067 - B3 SINE B2 -129 87 6 2 845 354 291 48 10 chr15 34097934 34098038 -69396936 + MTE2a LTR MaLR 58 165 -214 2 845 2328 83 111 0 chr15 34098057 34098464 -69396510 - RLTR47_MM LTR ERV1 0 532 81 2 845 461 277 42 0 chr15 34098473 34098592 -69396382 - RSINE1 SINE B4 -35 130 7 2 845 489 250 84 19 chr15 34098577 34098732 -69396242 + MTE2a LTR MaLR 184 348 -31 2 845 563 0 15 0 chr15 34098737 34098804 -69396170 + (TTTTG)n Simple_repeat Simple_repeat 3 70 0 2 845 468 195 58 4 chr15 34098805 34098921 -69396053 - B1_Mur3 SINE Alu -12 137 1 2 845 3471 28 5 0 chr15 34099191 34099585 -69395389 - MTA_Mm LTR MaLR 0 396 1 2 845 1003 106 36 1 chr15 34099599 34099772 -69395202 + B2_Mm2 SINE B2 9 188 -7 2 845 22 0 0 0 chr15 34099988 34100010 -69394964 + AT_rich Low_complexity Low_complexity 1 22 0 2 845 396 0 0 0 chr15 34100142 34100186 -69394788 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 2 845 412 92 0 23 chr15 34100189 34100267 -69394707 - B2_Mm1a SINE B2 -42 151 79 2 845 339 25 0 0 chr15 34100307 34100347 -69394627 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 2 845 908 66 96 0 chr15 34100350 34100486 -69394488 - B2_Mm2 SINE B2 -45 150 2 2 845 291 113 0 0 chr15 34101659 34101712 -69393262 + (TTTTTG)n Simple_repeat Simple_repeat 3 55 0 2 845 671 187 21 21 chr15 34101782 34101924 -69393050 + ID_B1 SINE B4 81 222 -2 2 845 399 127 0 0 chr15 34101924 34101987 -69392987 + (TAAA)n Simple_repeat Simple_repeat 1 63 0 2 845 369 257 103 39 chr15 34102024 34102242 -69392732 + MLT2D LTR ERVL 56 299 -165 2 845 240 244 121 129 chr15 34102263 34102395 -69392579 + B1F SINE Alu 13 143 -6 2 845 362 280 62 56 chr15 34102278 34102478 -69392496 + B4A SINE B4 84 292 0 2 845 351 304 0 17 chr15 34102485 34102602 -69392372 + (CA)n Simple_repeat Simple_repeat 2 116 0 2 845 525 261 39 0 chr15 34102653 34102783 -69392191 + RSINE1 SINE B4 3 137 -28 2 845 180 0 0 0 chr15 34102793 34102813 -69392161 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2 845 358 127 0 0 chr15 34103110 34103165 -69391809 - ORR1C1 LTR MaLR 0 378 324 2 845 1078 49 0 0 chr15 34103161 34103303 -69391671 - B1_Mus2 SINE Alu 0 147 6 2 845 1297 160 145 0 chr15 34103304 34103573 -69391401 - ORR1C1 LTR MaLR -35 343 36 2 845 820 132 105 13 chr15 34103558 34103711 -69391263 - B2_Mm2 SINE B2 -28 167 1 2 845 643 169 88 8 chr15 34103756 34103881 -69391093 + B1_Mus1 SINE Alu 11 145 -3 2 845 180 111 0 0 chr15 34103882 34103909 -69391065 + (CAA)n Simple_repeat Simple_repeat 1 27 0 2 845 203 143 0 45 chr15 34103932 34103976 -69390998 + (CAAAC)n Simple_repeat Simple_repeat 3 44 0 2 845 219 310 0 0 chr15 34104020 34104078 -69390896 + B3A SINE B2 16 73 -125 2 845 1219 48 0 0 chr15 34104305 34104450 -69390524 - B1_Mm SINE Alu -2 145 1 2 845 1377 279 17 71 chr15 34104562 34105083 -69389891 + RLTR19 LTR ERVK 7 499 0 2 845 387 0 0 0 chr15 34105190 34105233 -69389741 + (TC)n Simple_repeat Simple_repeat 1 43 0 2 845 459 0 0 0 chr15 34105233 34105283 -69389691 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 845 527 247 118 106 chr15 34105468 34105633 -69389341 + RLTR18 LTR ERVK 282 458 -158 2 845 792 0 0 0 chr15 34105633 34105721 -69389253 + (TTTC)n Simple_repeat Simple_repeat 3 90 0 2 845 527 247 118 106 chr15 34105721 34105886 -69389088 + RLTR18 LTR ERVK 459 616 0 2 845 816 88 0 0 chr15 34105925 34106039 -69388935 + (TC)n Simple_repeat Simple_repeat 2 115 0 2 845 693 193 22 0 chr15 34106039 34106174 -69388800 - B1_Mur2 SINE Alu -7 142 5 2 845 836 169 21 7 chr15 34106202 34106345 -69388629 - B1_Mus1 SINE Alu 0 148 4 2 845 2682 170 98 44 chr15 34106345 34107027 -69387947 + RMER13B LTR ERVK 3 787 -171 2 845 477 50 0 0 chr15 34107557 34107617 -69387357 + (TATG)n Simple_repeat Simple_repeat 2 61 0 2 845 572 289 68 29 chr15 34107621 34107828 -69387146 - ID_B1 SINE B4 -7 217 3 2 845 300 169 0 40 chr15 34107836 34107901 -69387073 + L1MD LINE L1 5535 5594 -646 2 845 23 33 0 0 chr15 34107903 34107933 -69387041 + AT_rich Low_complexity Low_complexity 1 30 0 2 845 943 250 0 0 chr15 34107957 34108133 -69386841 - B3A SINE B2 -18 180 5 2 845 280 312 40 40 chr15 34108141 34108341 -69386633 + L1MD LINE L1 5587 5786 -573 2 845 417 190 97 12 chr15 34108369 34108534 -69386440 + RMER17C LTR ERVK 95 273 -137 2 845 180 77 0 0 chr15 34108661 34108687 -69386287 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 845 375 171 226 44 chr15 34108837 34108886 -69386088 - B2_Mm1a SINE B2 -1 192 139 2 845 1322 74 0 11 chr15 34108886 34109063 -69385911 - B2_Mm2 SINE B2 -19 176 2 2 845 530 105 113 26 chr15 34109063 34109172 -69385802 - B2_Mm2 SINE B2 -55 138 5 2 845 616 89 0 0 chr15 34109251 34109330 -69385644 + L1Md_F2 LINE L1 5508 5586 -297 2 845 8835 22 0 2 chr15 34109330 34110327 -69384647 + L1Md_F2 LINE L1 5587 6581 -1 2 845 218 217 0 0 chr15 34110681 34110727 -69384247 + A-rich Low_complexity Low_complexity 1 46 0 2 845 534 306 28 0 chr15 34110982 34111162 -69383812 + L1MA6 LINE L1 5769 5953 -347 2 845 385 181 36 0 chr15 34111377 34111460 -69383514 + RMER1B Other Other 979 1064 -2 2 845 1453 78 5 0 chr15 34112754 34112946 -69382028 - B2_Mm1t SINE B2 0 193 1 2 845 980 93 25 122 chr15 34112964 34113160 -69381814 + B2_Mm1t SINE B2 2 178 -15 2 845 294 58 345 18 chr15 34113190 34113297 -69381677 + B2_Mm2 SINE B2 49 193 -2 2 845 348 24 0 0 chr15 34113448 34113489 -69381485 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 845 1425 85 16 0 chr15 34113929 34114117 -69380857 + B2_Mm2 SINE B2 5 195 0 3 845 263 93 0 23 chr15 34114200 34114244 -69380730 + (TTTTC)n Simple_repeat Simple_repeat 5 47 0 3 845 1181 108 0 35 chr15 34114244 34114258 -69380716 - B2_Mm2 SINE B2 0 195 182 3 845 381 185 360 27 chr15 34114258 34114369 -69380605 - B1_Mur4 SINE Alu 0 150 3 3 845 1181 108 0 35 chr15 34114369 34114388 -69380586 - B2_Mm2 SINE B2 -14 181 166 3 845 180 0 0 0 chr15 34114388 34114408 -69380566 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 3 845 1181 108 0 35 chr15 34114408 34114574 -69380400 - B2_Mm2 SINE B2 -30 165 2 3 845 488 244 8 16 chr15 34114769 34114894 -69380080 + RMER15 LTR ERVL 302 425 -150 3 845 430 156 113 10 chr15 34116814 34116911 -69378063 - L1MC3 LINE L1 -677 7108 7002 3 845 1031 134 42 26 chr15 34116926 34117117 -69377857 - B2_Mm2 SINE B2 0 195 2 3 845 331 359 62 0 chr15 34117905 34118050 -69376924 + MIR3 SINE MIR 50 203 -5 3 845 3586 105 113 2 chr15 34118087 34118689 -69376285 - RLTR33 LTR ERVK 0 678 10 3 845 1839 92 92 0 chr15 34118709 34119001 -69375973 - ORR1A2 LTR MaLR -8 319 1 3 845 414 0 0 0 chr15 34119112 34119158 -69375816 + (GA)n Simple_repeat Simple_repeat 2 47 0 3 845 2575 72 196 5 chr15 34119441 34119885 -69375089 + RLTR47_MM LTR ERV1 1 529 -3 3 845 505 235 165 59 chr15 34120023 34120191 -69374783 + B3 SINE B2 43 216 0 3 845 711 226 63 26 chr15 34120199 34120390 -69374584 + B3A SINE B2 1 198 0 3 845 283 308 178 0 chr15 34120451 34120597 -69374377 - Lx9 LINE L1 -366 7278 7107 3 845 593 273 119 77 chr15 34120637 34120816 -69374158 - RLTR9A LTR ERVK 0 368 197 3 845 6600 55 42 4 chr15 34120816 34121639 -69373335 - RLTR13A LTR ERVK 0 855 1 3 845 2006 104 210 3 chr15 34121639 34121967 -69373007 - MTB LTR MaLR -4 396 1 3 845 593 273 119 77 chr15 34121967 34122139 -69372835 - RLTR9A LTR ERVK -172 196 2 3 845 1097 106 0 0 chr15 34122417 34122578 -69372396 - B2_Mm2 SINE B2 -33 162 2 3 845 3431 160 117 37 chr15 34122579 34123317 -69371657 - RLTR19-int LTR ERVK -5201 936 140 3 845 2426 176 12 20 chr15 34123326 34123813 -69371161 - RLTR19C LTR ERVK 0 506 24 3 845 494 294 58 25 chr15 34123813 34124054 -69370920 - RMER17C LTR ERVK -34 376 128 3 845 670 199 54 117 chr15 34124310 34124659 -69370315 + RMER17C-int LTR ERVK 3414 3725 -2412 3 845 625 165 10 10 chr15 34124660 34124764 -69370210 - LSU-rRNA_Hsa rRNA rRNA -730 4305 4202 3 845 30161 104 35 14 chr15 34124785 34130780 -69364194 + L1_Mus1 LINE L1 406 6567 0 3 845 1814 206 148 102 chr15 34130782 34131103 -69363871 + RMER17C-int LTR ERVK 2608 2781 -457 3 845 3585 44 51 4 chr15 34131103 34131557 -69363417 - IAPLTR2_Mm LTR ERVK 0 475 1 3 845 1814 220 80 73 chr15 34131557 34132002 -69362972 + RMER17C-int LTR ERVK 2782 3238 0 3 845 1009 211 54 0 chr15 34132323 34132527 -69362447 - B3 SINE B2 0 216 2 3 845 2313 214 46 26 chr15 34132698 34133264 -69361710 + RLTR20B3 LTR ERVK 1 577 0 3 845 1338 81 48 0 chr15 34133333 34133519 -69361455 + B2_Mm2 SINE B2 1 195 0 3 845 278 49 24 0 chr15 34133718 34133759 -69361215 + RLTR14 LTR ERV1 6 47 -335 3 845 1546 152 92 3 chr15 34134284 34134587 -69360387 + RLTR14 LTR ERV1 44 373 -9 3 845 368 305 7 54 chr15 34134677 34134693 -69360281 + ID_B1 SINE B4 76 217 -7 3 845 541 252 15 15 chr15 34134693 34134826 -69360148 + B1F SINE Alu 10 142 -7 3 845 844 154 44 0 chr15 34135194 34135330 -69359644 + B1_Mur3 SINE Alu 5 146 -3 3 845 996 119 0 0 chr15 34135353 34135512 -69359462 + (GAAA)n Simple_repeat Simple_repeat 3 161 0 3 845 537 219 89 0 chr15 34135849 34135972 -69359002 - B1_Mur3 SINE Alu -15 134 1 3 845 279 100 19 39 chr15 34136008 34136060 -69358914 - L1M3 LINE L1 -332 5848 5798 3 845 692 189 22 78 chr15 34136225 34136545 -69358429 - RMER17C LTR ERVK 0 410 4 3 845 1399 245 84 83 chr15 34136974 34137303 -69357671 - RMER17C-int LTR ERVK -54 3184 2838 3 845 1193 97 5 136 chr15 34137303 34137374 -69357600 - B2_Mm1a SINE B2 -5 188 145 3 845 1107 66 0 0 chr15 34137374 34137511 -69357463 - B1_Mus1 SINE Alu -10 138 2 3 845 1193 97 5 136 chr15 34137511 34137653 -69357321 - B2_Mm1a SINE B2 -49 144 3 3 845 1399 245 84 83 chr15 34137653 34137880 -69357094 - RMER17C-int LTR ERVK -401 2837 2627 3 845 495 0 0 0 chr15 34137895 34137950 -69357024 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 845 639 168 0 10 chr15 34137973 34138075 -69356899 + LSU-rRNA_Hsa rRNA rRNA 4202 4302 -733 3 845 798 186 51 169 chr15 34138075 34138430 -69356544 - RLTR19-int LTR ERVK -2412 3725 3413 3 845 284 235 29 0 chr15 34138470 34138538 -69356436 - RLTR19-int LTR ERVK -2889 3248 3179 3 845 2275 195 29 31 chr15 34138665 34139179 -69355795 - RLTR11A LTR ERVK 0 528 16 3 845 542 113 48 58 chr15 34139211 34139314 -69355660 - MYSERV6-int LTR ERVK -276 8683 8582 3 845 929 63 0 0 chr15 34139314 34139440 -69355534 + B1_Mus1 SINE Alu 2 127 -21 3 845 267 31 0 0 chr15 34139440 34139472 -69355502 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 845 1134 237 83 86 chr15 34139475 34139839 -69355135 - MYSERV6-int LTR ERVK -365 8594 8229 3 845 1145 52 0 0 chr15 34139839 34139975 -69354999 - B1_Mm SINE Alu -7 140 5 3 845 1134 244 81 98 chr15 34139975 34140213 -69354761 - MYSERV6-int LTR ERVK -731 8228 8117 3 845 825 218 52 48 chr15 34140214 34140484 -69354490 - BGLII_B LTR ERVK 0 441 171 3 845 733 220 58 25 chr15 34140548 34140790 -69354184 - RLTR42-int LTR ERVK -3403 2119 1870 3 845 283 211 42 53 chr15 34141060 34141155 -69353819 - MYSERV-int LTR ERVK -1065 5485 5392 3 845 359 263 0 106 chr15 34141208 34141237 -69353737 + MT2B LTR ERVL 140 154 -447 3 845 765 148 0 23 chr15 34141237 34141368 -69353606 + B1_Mus1 SINE Alu 1 128 -20 3 845 1136 98 0 0 chr15 34141384 34141548 -69353426 - B2_Mm2 SINE B2 -31 164 1 3 845 219 69 0 0 chr15 34141618 34141647 -69353327 + (CATA)n Simple_repeat Simple_repeat 3 31 0 3 845 308 24 24 0 chr15 34141670 34141711 -69353263 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 3 845 1371 73 39 0 chr15 34141834 34142012 -69352962 + B2_Mm2 SINE B2 3 187 -8 3 845 362 247 95 91 chr15 34142779 34143020 -69351954 - RodERV21-int LTR ERV1 -4277 714 473 3 845 311 278 110 14 chr15 34143023 34143169 -69351805 - RodERV21-int LTR ERV1 -4784 207 48 3 845 258 238 159 0 chr15 34143516 34143579 -69351395 - ID2 SINE ID -9 74 2 3 845 284 221 156 0 chr15 34143579 34143656 -69351318 - MER74C LTR ERVL -14 446 358 3 845 315 191 0 105 chr15 34143749 34143798 -69351176 + ORR1B1 LTR MaLR 1 77 -317 3 845 1742 134 53 205 chr15 34143798 34144267 -69350707 + RMER10B LTR ERVL 1 398 0 3 845 315 239 0 107 chr15 34144267 34144347 -69350627 + ORR1B1 LTR MaLR 78 150 -244 3 845 442 275 47 6 chr15 34144550 34144722 -69350252 + RLTR41 LTR ERV1 268 446 0 3 845 1163 161 40 24 chr15 34144722 34144970 -69350004 + ORR1B1 LTR MaLR 134 385 -9 3 845 388 221 0 0 chr15 34145222 34145299 -69349675 + LTR33A LTR ERVL 437 513 -7 3 845 517 234 0 18 chr15 34145915 34146028 -69348946 - B1_Mur2 SINE Alu -2 147 37 3 845 479 243 56 49 chr15 34146066 34146209 -69348765 - B1_Mur3 SINE Alu 0 149 6 3 845 1297 225 69 22 chr15 34146256 34146619 -69348355 + RLTR18B LTR ERVK 47 426 -86 3 845 226 167 19 0 chr15 34146711 34146765 -69348209 + T-rich Low_complexity Low_complexity 2 56 0 3 845 3310 40 25 0 chr15 34147318 34147719 -69347255 - RLTR10A LTR ERVK 0 411 1 3 845 4998 82 5 15 chr15 34147719 34148391 -69346583 - RLTR10-int LTR ERVK -1 1986 1322 3 845 2029 73 104 0 chr15 34148389 34148791 -69346183 - IAP-d-int LTR ERVK -1092 5450 5007 3 845 371 140 0 0 chr15 34148791 34148848 -69346126 - IAP-d-int LTR ERVK -6039 503 447 3 845 488 316 31 27 chr15 34148865 34149122 -69345852 - RLTR10-int LTR ERVK -6015 1566 1309 3 845 3891 62 23 23 chr15 34149285 34149885 -69345089 - RLTR10-int LTR ERVK -995 992 321 3 845 3237 40 24 20 chr15 34149897 34150306 -69344668 - RLTR10A LTR ERVK 0 411 1 3 845 538 88 154 0 chr15 34150418 34150509 -69344465 + RLTR23 LTR ERV1 1 105 -325 3 845 230 0 42 62 chr15 34150524 34150572 -69344402 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 3 845 429 313 0 8 chr15 34150597 34150729 -69344245 - RodERV21-int LTR ERV1 -1944 3047 2917 3 845 260 347 36 40 chr15 34151065 34151317 -69343657 - RLTR14-int LTR ERV1 -1868 3449 3199 3 845 1845 191 88 51 chr15 34151717 34152147 -69342827 - RLTR41 LTR ERV1 0 446 1 3 845 328 65 0 0 chr15 34152149 34152195 -69342779 - MTB_Mm LTR MaLR -361 46 1 3 845 3259 38 10 2 chr15 34152491 34152884 -69342090 - MTA_Mm LTR MaLR 0 396 1 3 845 314 271 79 79 chr15 34153144 34153296 -69341678 + RLTR6-int LTR ERV1 7340 7491 -287 3 845 2335 112 56 160 chr15 34153434 34153914 -69341060 + RLTR23 LTR ERV1 1 430 0 3 845 186 43 0 0 chr15 34154080 34154103 -69340871 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 3 845 216 0 0 0 chr15 34154103 34154127 -69340847 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 845 943 62 78 8 chr15 34154127 34154256 -69340718 - B1_Mus1 SINE Alu -9 139 2 3 845 2918 41 9 0 chr15 34154618 34154961 -69340013 - ORR1A0 LTR MaLR 0 346 1 3 845 2969 32 32 0 chr15 34155027 34155370 -69339604 - IAPEY2_LTR LTR ERVK -3 354 1 3 845 3481 113 15 29 chr15 34155370 34156103 -69338871 - IAPEz-int LTR ERVK 0 7581 6907 3 845 502 34 0 0 chr15 34156103 34156162 -69338812 - IAPEz-int LTR ERVK -2770 4910 4852 3 845 1698 81 39 0 chr15 34156129 34156363 -69338611 - IAPEz-int LTR ERVK -4957 2723 2481 3 845 2506 124 46 48 chr15 34156363 34156839 -69338135 - IAPLTR2_Mm LTR ERVK 0 475 1 3 845 12607 26 6 0 chr15 34156839 34158259 -69336715 - IAPEz-int LTR ERVK 0 6481 5053 3 845 484 134 0 0 chr15 34158247 34158314 -69336660 - IAPEz-int LTR ERVK -5362 2318 2252 3 845 953 50 0 8 chr15 34158315 34158435 -69336539 - IAPEz-int LTR ERVK -5004 1477 1359 3 845 3538 66 5 29 chr15 34158435 34159175 -69335799 - IAPEz-int LTR ERVK -5819 662 17 3 845 302 0 53 0 chr15 34159175 34159213 -69335761 - IAPEz-int LTR ERVK -6434 47 8 3 845 2535 121 46 48 chr15 34159213 34159689 -69335285 - IAPEY2_LTR LTR ERVK 0 475 1 3 845 1952 69 12 0 chr15 34159689 34159935 -69335039 - IAPEY3-int LTR ERVK -5194 2486 2238 3 845 9605 121 11 39 chr15 34159912 34161413 -69333561 - IAPEY3-int LTR ERVK -5698 1982 524 3 845 821 147 46 58 chr15 34161412 34161576 -69333398 - IAPLTR4_I LTR ERVK -1290 180 18 3 845 3008 34 14 0 chr15 34161576 34161925 -69333049 - IAPEY2_LTR LTR ERVK -3 354 1 3 845 1256 27 0 7 chr15 34162606 34162754 -69332220 + B1_Mm SINE Alu 1 147 0 3 845 370 286 71 9 chr15 34162837 34162950 -69332024 + ID_B1 SINE B4 96 215 -9 3 845 633 195 107 24 chr15 34163093 34163261 -69331713 - B3 SINE B2 -10 206 25 3 845 243 0 0 0 chr15 34163705 34163732 -69331242 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 845 401 323 16 16 chr15 34163751 34163880 -69331094 - B3A SINE B2 -69 129 1 3 845 516 72 0 0 chr15 34163988 34164057 -69330917 + (T)n Simple_repeat Simple_repeat 1 69 0 3 845 884 204 12 66 chr15 34164211 34164452 -69330522 - RLTR1 LTR ERV1 -120 504 277 3 845 2227 192 55 14 chr15 34164837 34165328 -69329646 - RLTR11A2 LTR ERVK -15 512 2 3 845 236 216 0 19 chr15 34165367 34165419 -69329555 + A-rich Low_complexity Low_complexity 1 51 0 3 845 343 170 234 9 chr15 34165676 34165783 -69329191 + B1F2 SINE Alu 12 142 -7 3 845 653 196 19 71 chr15 34165827 34165981 -69328993 - B1_Mur1 SINE Alu -2 147 2 3 845 1119 95 0 13 chr15 34166737 34166886 -69328088 - B1_Mus1 SINE Alu 0 148 2 3 845 272 27 0 26 chr15 34166953 34166991 -69327983 + (TTCC)n Simple_repeat Simple_repeat 2 38 0 4 845 406 202 0 45 chr15 34166991 34167079 -69327895 - B1_Mur3 SINE Alu -1 148 65 4 845 255 146 0 77 chr15 34167060 34167112 -69327862 - B1_Mur3 SINE Alu -37 112 65 4 845 533 170 0 104 chr15 34167093 34167218 -69327756 - B1_Mur3 SINE Alu -37 112 1 4 845 466 290 117 33 chr15 34170499 34170925 -69324049 - L1ME3A LINE L1 -342 5831 5359 4 845 563 165 42 42 chr15 34171040 34171160 -69323814 - B1_Mur3 SINE Alu -15 134 15 4 845 995 108 11 22 chr15 34171177 34171357 -69323617 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 4 845 730 183 15 30 chr15 34171357 34171492 -69323482 - B1_Mus2 SINE Alu -13 134 2 4 845 288 257 221 7 chr15 34171493 34171642 -69323332 - L1ME3A LINE L1 -949 5197 5017 4 845 348 254 0 0 chr15 34171695 34171766 -69323208 + B1F1 SINE Alu 1 71 -78 4 845 348 257 156 16 chr15 34171896 34172082 -69322892 + MER2 DNA MER2_type 84 295 -50 4 845 415 279 129 38 chr15 34172175 34172361 -69322613 - B3 SINE B2 -12 204 2 4 845 473 218 99 26 chr15 34172562 34172713 -69322261 - B3A SINE B2 -4 194 33 4 845 198 0 0 0 chr15 34172736 34172758 -69322216 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 845 1371 63 40 0 chr15 34172761 34172935 -69322039 - B2_Mm2 SINE B2 -14 181 1 4 845 206 194 14 56 chr15 34173160 34173231 -69321743 + T-rich Low_complexity Low_complexity 4 71 0 4 845 697 170 54 41 chr15 34173233 34173380 -69321594 - B1_Mur3 SINE Alu 0 149 1 4 845 1632 82 10 20 chr15 34173538 34173823 -69321151 + RLTR13B1 LTR ERVK 1 267 -588 4 845 670 231 0 58 chr15 34173948 34174104 -69320870 - B1F1 SINE Alu -2 147 1 4 845 1631 26 21 0 chr15 34174357 34174546 -69320428 + B2_Mm1a SINE B2 1 193 0 4 845 958 187 96 0 chr15 34174670 34174857 -69320117 - B3 SINE B2 -11 205 1 4 845 255 125 0 0 chr15 34175142 34175182 -69319792 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 845 604 69 123 38 chr15 34175450 34175556 -69319418 - B1_Mus2 SINE Alu -15 132 18 4 845 197 83 0 27 chr15 34175586 34175623 -69319351 + (CACCC)n Simple_repeat Simple_repeat 3 38 0 4 845 225 0 0 0 chr15 34176034 34176059 -69318915 + (TC)n Simple_repeat Simple_repeat 2 26 0 4 845 1199 61 0 0 chr15 34176061 34176209 -69318765 - B1_Mus1 SINE Alu 0 148 1 4 845 257 201 0 35 chr15 34176232 34176305 -69318669 - MER57-int LTR ERV1 -293 7244 7195 4 845 756 203 137 0 chr15 34176659 34176856 -69318118 - RLTR28 LTR ERVL -16 508 285 4 845 461 162 197 11 chr15 34176853 34176969 -69318005 - B1_Mus1 SINE Alu -17 133 4 4 845 543 16 0 0 chr15 34177680 34177744 -69317230 + (GA)n Simple_repeat Simple_repeat 2 65 0 4 845 1998 133 46 49 chr15 34178176 34178587 -69316387 - RMER17C LTR ERVK 0 410 1 4 845 2249 150 72 99 chr15 34179177 34179732 -69315242 + RMER15 LTR ERVL 4 543 -32 4 845 2023 263 49 42 chr15 34179775 34180370 -69314604 + RMER15-int LTR ERVL 28 626 -4373 4 845 3041 245 124 47 chr15 34180446 34181811 -69313163 + RMER15-int LTR ERVL 872 2340 -2659 4 845 513 156 0 0 chr15 34181811 34181907 -69313067 + (TA)n Simple_repeat Simple_repeat 1 96 0 4 845 2555 206 102 31 chr15 34181944 34182559 -69312415 + RMER15-int LTR ERVL 4031 4689 -310 4 845 994 93 0 0 chr15 34182559 34182699 -69312275 - B2_Mm2 SINE B2 -52 143 4 4 845 268 211 0 19 chr15 34182784 34182837 -69312137 + RMER15-int LTR ERVL 4829 4880 -119 4 845 402 206 124 0 chr15 34183234 34183331 -69311643 - B3 SINE B2 -2 214 106 4 845 182 37 37 0 chr15 34183658 34183685 -69311289 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 4 845 595 169 136 7 chr15 34183703 34183858 -69311116 - RMER10A LTR ERVL -47 395 221 4 845 465 295 168 8 chr15 34184472 34184728 -69310246 + RMER5 LTR ERV1 38 334 -200 4 845 939 146 37 48 chr15 34184811 34184998 -69309976 + B2_Mm2 SINE B2 1 185 -10 4 845 180 0 0 0 chr15 34185003 34185023 -69309951 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 845 420 192 0 0 chr15 34185115 34185188 -69309786 + PB1D9 SINE Alu 48 120 0 4 845 401 95 0 16 chr15 34185222 34185286 -69309688 + (TATG)n Simple_repeat Simple_repeat 4 66 0 4 845 447 113 0 0 chr15 34186454 34186525 -69308449 + (TCTG)n Simple_repeat Simple_repeat 2 72 0 4 845 266 114 329 0 chr15 34186572 34186642 -69308332 - PB1D9 SINE Alu -18 102 10 4 845 245 268 58 58 chr15 34186941 34187028 -69307946 + B1_Mur1 SINE Alu 40 126 -23 4 845 231 290 128 11 chr15 34187088 34187136 -69307838 + PB1D10 SINE Alu 3 107 -10 4 845 260 217 0 0 chr15 34187136 34187182 -69307792 + ID_B1 SINE B4 169 214 -10 4 845 369 0 0 0 chr15 34187903 34187944 -69307030 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 845 298 266 90 103 chr15 34188067 34188222 -69306752 - RSINE1 SINE B4 0 165 13 4 845 345 287 57 79 chr15 34188808 34188948 -69306026 - ID_B1 SINE B4 -12 212 76 4 845 414 319 14 29 chr15 34188963 34189102 -69305872 - ID_B1 SINE B4 -8 216 80 4 845 877 229 54 10 chr15 34189575 34189778 -69305196 - B3 SINE B2 -4 212 1 4 845 860 75 322 0 chr15 34190527 34190656 -69304318 + B2_Mm2 SINE B2 1 161 -34 4 845 348 24 0 0 chr15 34190656 34190697 -69304277 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 4 845 860 75 322 0 chr15 34190697 34190713 -69304261 + B2_Mm2 SINE B2 162 191 -4 4 845 338 330 0 17 chr15 34190736 34190856 -69304118 + ID_B1 SINE B4 102 219 -5 4 845 413 196 42 67 chr15 34190944 34191064 -69303910 - PB1D9 SINE Alu -2 118 2 4 845 1533 58 11 0 chr15 34191243 34191434 -69303540 - B2_Mm2 SINE B2 -1 194 2 4 845 285 234 4 27 chr15 34191500 34191600 -69303374 + B1F SINE Alu 1 97 -20 4 845 280 299 0 13 chr15 34191602 34191680 -69303294 + ID4 SINE ID 3 79 -4 4 845 498 277 18 106 chr15 34191842 34192060 -69302914 + B3 SINE B2 7 205 -11 4 845 720 139 61 68 chr15 34192066 34192213 -69302761 - B1_Mur4 SINE Alu 0 150 5 4 845 881 191 21 26 chr15 34192226 34192419 -69302555 - B2_Mm2 SINE B2 -3 192 1 4 845 294 29 0 0 chr15 34192452 34192487 -69302487 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 845 558 254 158 0 chr15 34192519 34192684 -69302290 - ID_B1 SINE B4 -19 205 15 4 845 24 0 0 0 chr15 34192884 34192908 -69302066 + AT_rich Low_complexity Low_complexity 1 24 0 4 845 450 260 199 32 chr15 34193382 34193608 -69301366 + MTD LTR MaLR 153 405 -14 4 845 378 0 0 0 chr15 34194053 34194095 -69300879 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 4 845 286 266 0 21 chr15 34194191 34194287 -69300687 - PB1D7 SINE Alu -1 119 26 4 845 236 30 30 0 chr15 34194386 34194419 -69300555 + (CTTG)n Simple_repeat Simple_repeat 2 35 0 4 845 316 235 78 48 chr15 34194691 34194794 -69300180 + PB1D7 SINE Alu 6 111 -9 4 845 308 319 72 26 chr15 34194895 34195088 -69299886 + L1MB7 LINE L1 5972 6173 -11 4 845 543 53 0 0 chr15 34195771 34195846 -69299128 + (TC)n Simple_repeat Simple_repeat 2 76 0 4 845 998 83 45 0 chr15 34195846 34195979 -69298995 - B1_Mus1 SINE Alu -9 139 1 4 845 665 213 41 0 chr15 34196394 34196516 -69298458 - ETnERV2-int LTR ERVK -210 7196 7070 4 845 1195 71 30 0 chr15 34196933 34197102 -69297872 - ORR1A3 LTR MaLR 0 326 153 4 845 216 0 0 0 chr15 34197102 34197126 -69297848 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 4 845 396 37 0 0 chr15 34197592 34197646 -69297328 - B1_Mur4 SINE Alu 0 150 97 4 845 532 42 0 0 chr15 34197736 34197807 -69297167 - B1_Mm SINE Alu 0 147 77 4 845 1100 84 0 0 chr15 34197928 34198083 -69296891 + B2_Mm2 SINE B2 4 158 -37 4 845 459 0 0 0 chr15 34198084 34198135 -69296839 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 4 845 971 152 19 34 chr15 34199836 34200041 -69294933 - ORR1A2 LTR MaLR -123 204 3 4 845 324 270 68 55 chr15 34200564 34200627 -69294347 - MTEb LTR MaLR -200 179 6 4 845 342 242 55 0 chr15 34200627 34200718 -69294256 - MLT2B3 LTR ERVL -453 101 6 4 845 231 0 77 0 chr15 34201529 34201568 -69293406 + (TTG)n Simple_repeat Simple_repeat 2 43 0 4 845 1178 50 0 0 chr15 34201568 34201707 -69293267 - B1_Mus2 SINE Alu -8 139 1 4 845 806 170 46 52 chr15 34202246 34202420 -69292554 - URR1B DNA MER1_type -52 173 1 4 845 186 73 73 0 chr15 34202569 34202610 -69292364 + (TTTC)n Simple_repeat Simple_repeat 4 47 0 4 845 910 192 42 11 chr15 34202610 34202799 -69292175 - B2_Mm2 SINE B2 0 195 1 4 845 198 0 0 0 chr15 34203137 34203159 -69291815 + (TGG)n Simple_repeat Simple_repeat 3 24 0 4 845 1078 112 0 0 chr15 34203749 34203892 -69291082 - B1_Mur4 SINE Alu -5 145 3 4 845 343 253 0 37 chr15 34203946 34204028 -69290946 - ID4_ SINE ID 0 83 5 4 845 266 326 0 11 chr15 34204243 34204336 -69290638 + G-rich Low_complexity Low_complexity 1 92 0 4 845 21 36 0 0 chr15 34204885 34204913 -69290061 + AT_rich Low_complexity Low_complexity 1 28 0 4 845 411 148 0 111 chr15 34204975 34205074 -69289900 + ID_B1 SINE B4 124 211 -13 4 845 349 292 94 0 chr15 34205127 34205233 -69289741 + PB1D10 SINE Alu 1 116 -1 4 845 898 208 94 0 chr15 34206154 34206346 -69288628 + B3 SINE B2 7 216 0 4 845 5076 68 23 0 chr15 34206361 34207011 -69287963 + L1_Mus1 LINE L1 5903 6567 0 4 845 800 122 28 28 chr15 34207395 34207539 -69287435 - B1_Mur4 SINE Alu 0 150 7 4 845 207 0 0 0 chr15 34208034 34208057 -69286917 + (CAAAAA)n Simple_repeat Simple_repeat 3 25 0 4 845 442 233 103 0 chr15 34208071 34208187 -69286787 + B3 SINE B2 8 135 -81 4 845 385 279 124 0 chr15 34208337 34208466 -69286508 - L1MC5 LINE L1 -1134 6827 6683 4 845 1746 16 0 0 chr15 34209079 34209272 -69285702 - B2_Mm1a SINE B2 0 193 1 5 105 1240 21 0 20 chr15 34209755 34209902 -69285072 + B1_Mus2 SINE Alu 3 146 -1 5 846 242 304 29 0 chr15 34210674 34210743 -69284231 - B4A SINE B4 0 292 222 5 846 1168 62 0 0 chr15 34211688 34211832 -69283142 - B1_Mus2 SINE Alu -2 145 2 5 846 589 118 39 10 chr15 34214376 34214479 -69280495 - B1_Mus2 SINE Alu 0 147 42 5 846 590 302 121 19 chr15 34214492 34214749 -69280225 + MTE2b LTR MaLR 13 295 -84 5 846 344 216 68 0 chr15 34215539 34215627 -69279347 + MTE2b LTR MaLR 284 377 -2 5 846 1205 48 0 7 chr15 34215800 34215948 -69279026 + B1_Mus2 SINE Alu 1 147 0 5 846 1368 34 0 14 chr15 34215948 34216157 -69278817 + (GAAA)n Simple_repeat Simple_repeat 1 205 0 5 846 330 87 0 0 chr15 34216518 34216564 -69278410 + (TTTTC)n Simple_repeat Simple_repeat 3 48 0 5 846 450 248 170 0 chr15 34217787 34217928 -69277046 + B3A SINE B2 5 169 -29 5 846 237 222 0 0 chr15 34217957 34218002 -69276972 - RSINE1 SINE B4 -30 135 91 5 846 1698 154 161 9 chr15 34218085 34218452 -69276522 + Lx5 LINE L1 5308 5679 -198 5 846 612 77 0 9 chr15 34218606 34218698 -69276276 + Lx5 LINE L1 5659 5745 -1255 5 846 1495 151 4 12 chr15 34218698 34218946 -69276028 + MERVK26-int LTR ERVK 3896 4141 -2778 5 846 935 336 54 19 chr15 34218955 34219365 -69275609 + RodERV21-int LTR ERV1 4280 4703 -288 5 846 1803 144 100 0 chr15 34219885 34220109 -69274865 + MERVK26-int LTR ERVK 4152 4381 -2538 5 846 468 0 0 0 chr15 34220109 34220161 -69274813 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 846 1803 144 100 0 chr15 34220161 34220235 -69274739 + MERVK26-int LTR ERVK 4382 4478 -2441 5 846 4138 208 55 10 chr15 34220245 34221102 -69273872 - MERVK26-int LTR ERVK -5751 1168 287 5 846 486 0 0 0 chr15 34221102 34221156 -69273818 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 5 846 4138 208 55 10 chr15 34221156 34221187 -69273787 - MERVK26-int LTR ERVK -6633 286 242 5 846 1752 103 26 214 chr15 34221187 34221692 -69273282 + RMER17C LTR ERVK 1 410 0 5 846 2483 226 103 92 chr15 34221692 34222647 -69272327 + RMER17C-int LTR ERVK 1 965 -2273 5 846 5965 114 50 24 chr15 34223215 34223472 -69271502 + RMER17C-int LTR ERVK 1338 1602 -1636 5 846 420 37 0 0 chr15 34223472 34223526 -69271448 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 846 5965 114 50 24 chr15 34223526 34224223 -69270751 + RMER17C-int LTR ERVK 1603 2316 -922 5 846 4530 102 19 3 chr15 34224220 34224856 -69270118 + RMER17C-int LTR ERVK 2593 3238 0 5 846 642 169 3 209 chr15 34224856 34224968 -69270006 + RMER17C LTR ERVK 1 109 -301 5 846 1482 52 5 25 chr15 34224968 34225164 -69269810 - B2_Mm2 SINE B2 -1 194 3 5 846 642 169 3 209 chr15 34225164 34225357 -69269617 + RMER17C LTR ERVK 110 243 -167 5 846 974 177 35 65 chr15 34225332 34225562 -69269412 + RMER17C LTR ERVK 188 410 0 5 846 1025 231 37 29 chr15 34225562 34225803 -69269171 - MERVK26-int LTR ERVK -6675 244 2 5 846 764 266 67 58 chr15 34226055 34226405 -69268569 - RLTR26 LTR ERVK -225 417 21 5 846 3435 271 80 91 chr15 34226431 34227757 -69267217 + Lx5 LINE L1 5739 7050 0 5 846 205 243 14 41 chr15 34227823 34227881 -69267093 + GA-rich Low_complexity Low_complexity 1 57 0 5 846 224 245 0 0 chr15 34227824 34227877 -69267097 + A-rich Low_complexity Low_complexity 1 53 0 5 846 222 37 0 0 chr15 34227881 34227908 -69267066 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 5 846 205 243 14 41 chr15 34227908 34227922 -69267052 + polypurine Low_complexity Low_complexity 58 71 0 5 846 674 152 35 9 chr15 34227931 34228044 -69266930 + B1_Mur4 SINE Alu 35 150 0 5 846 237 180 0 0 chr15 34228525 34228575 -69266399 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 846 239 266 47 0 chr15 34228991 34229006 -69265968 + ID SINE ID 10 76 -148 5 846 255 204 41 0 chr15 34229006 34229055 -69265919 + ID4 SINE ID 25 75 -8 5 846 368 294 36 22 chr15 34229055 34229194 -69265780 - L1M4 LINE L1 -1827 4319 4179 5 846 350 340 180 0 chr15 34229202 34229408 -69265566 - L1MC LINE L1 -2040 4106 3864 5 846 493 333 83 62 chr15 34229569 34229761 -69265213 + B3 SINE B2 8 203 -13 5 846 232 245 19 0 chr15 34229796 34229849 -69265125 + B3 SINE B2 157 210 -6 5 846 588 251 19 82 chr15 34230541 34230749 -69264225 + B3A SINE B2 1 195 -3 5 846 898 256 27 85 chr15 34230798 34231093 -69263881 + B4 SINE B4 2 279 -13 5 846 881 224 78 41 chr15 34231228 34231538 -69263436 - RLTR11A LTR ERVK -4 524 218 5 846 288 223 266 0 chr15 34231763 34231857 -69263117 + B1F2 SINE Alu 25 143 -6 5 846 292 152 0 29 chr15 34231861 34231929 -69263045 + CT-rich Low_complexity Low_complexity 1 66 0 5 846 261 0 0 0 chr15 34231932 34231961 -69263013 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 846 1131 190 14 19 chr15 34231961 34232170 -69262804 + B3 SINE B2 9 216 0 5 846 597 175 216 29 chr15 34232264 34232430 -69262544 - MTD LTR MaLR -7 412 210 5 846 243 0 0 0 chr15 34232435 34232462 -69262512 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 846 739 229 0 7 chr15 34232462 34232597 -69262377 - B1_Mus2 SINE Alu -7 140 7 5 846 1079 109 7 0 chr15 34232612 34232759 -69262215 - B1_Mus1 SINE Alu 0 148 1 5 846 583 209 85 8 chr15 34233794 34233924 -69261050 - B1_Mur1 SINE Alu -1 148 9 5 846 1126 119 47 6 chr15 34233942 34234111 -69260863 - B2_Mm2 SINE B2 -19 176 1 5 846 429 20 0 0 chr15 34234289 34234339 -69260635 + (TTTTG)n Simple_repeat Simple_repeat 3 52 0 5 846 1137 51 0 7 chr15 34234339 34234477 -69260497 - B1_Mus1 SINE Alu -11 137 1 5 846 949 138 65 22 chr15 34234482 34234667 -69260307 - B2_Mm2 SINE B2 -2 193 1 5 846 1225 119 22 0 chr15 34234866 34235051 -69259923 + B2_Mm1t SINE B2 2 190 -3 5 846 4318 66 2 2 chr15 34235066 34235609 -69259365 - L1_Mus2 LINE L1 0 6566 6024 5 846 2108 62 11 0 chr15 34235618 34235890 -69259084 + L1_Mus2 LINE L1 5757 6031 -535 5 846 334 293 144 20 chr15 34237263 34237458 -69257516 + MIRb SINE MIR 6 224 -44 5 846 1118 80 6 0 chr15 34237653 34237816 -69257158 + (TTTC)n Simple_repeat Simple_repeat 2 165 0 5 846 1196 37 0 0 chr15 34237816 34237952 -69257022 - B1_Mm SINE Alu -10 137 2 5 846 686 264 7 14 chr15 34238390 34238536 -69256438 + ID_B1 SINE B4 80 224 0 5 846 1595 52 0 0 chr15 34239830 34240022 -69254952 - B2_Mm1t SINE B2 -1 192 1 5 846 354 295 55 33 chr15 34240053 34240144 -69254830 - RSINE1 SINE B4 0 165 73 5 846 257 109 22 0 chr15 34241009 34241055 -69253919 + (TC)n Simple_repeat Simple_repeat 2 48 0 5 846 701 317 11 73 chr15 34241097 34241369 -69253605 - Lx8 LINE L1 -208 7265 7011 5 846 284 324 103 48 chr15 34241412 34241684 -69253290 - L1ME1 LINE L1 -30 6149 5863 5 846 369 294 123 32 chr15 34241996 34242234 -69252740 - L1ME1 LINE L1 -573 5601 5344 5 846 1901 146 75 57 chr15 34242234 34242620 -69252354 + ORR1B1 LTR MaLR 2 394 0 5 846 369 247 157 16 chr15 34242620 34242764 -69252210 - L1ME1 LINE L1 -803 5343 5189 5 846 23 0 0 0 chr15 34242794 34242817 -69252157 + AT_rich Low_complexity Low_complexity 1 23 0 5 846 645 321 0 6 chr15 34242825 34242982 -69251992 + RSINE1 SINE B4 2 157 -8 5 846 460 193 48 0 chr15 34243169 34243252 -69251722 - B1_Mur3 SINE Alu -54 95 9 5 846 253 247 43 96 chr15 34243252 34243263 -69251711 - MT2B LTR ERVL -353 248 160 5 846 435 204 41 0 chr15 34243263 34243361 -69251613 - Lx9 LINE L1 -650 6994 6893 5 846 398 133 0 39 chr15 34243402 34243480 -69251494 + PB1D9 SINE Alu 40 114 -6 5 846 263 233 0 48 chr15 34243562 34243625 -69251349 + RSINE1 SINE B4 4 63 -102 5 846 2718 130 100 21 chr15 34243843 34244322 -69250652 - RLTR11A LTR ERVK 0 528 12 5 846 750 259 0 84 chr15 34244329 34244531 -69250443 + B3 SINE B2 27 211 -5 5 846 204 167 48 0 chr15 34245064 34245106 -69249868 + MIR SINE MIR 185 228 -34 5 846 363 214 71 0 chr15 34245188 34245258 -69249716 + PB1D10 SINE Alu 43 117 0 5 846 642 55 0 103 chr15 34245274 34245561 -69249413 + (CTGGGG)n Simple_repeat Simple_repeat 1 257 0 5 846 553 62 0 102 chr15 34245587 34245783 -69249191 + (CTGGGG)n Simple_repeat Simple_repeat 1 176 0 5 846 24 32 0 0 chr15 34245867 34245898 -69249076 + AT_rich Low_complexity Low_complexity 1 31 0 5 846 1052 53 36 8 chr15 34246473 34246723 -69248251 + (TG)n Simple_repeat Simple_repeat 1 257 0 5 846 268 319 228 6 chr15 34246847 34247005 -69247969 - MIRb SINE MIR -58 210 18 5 846 257 100 20 0 chr15 34247500 34247550 -69247424 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 846 243 0 0 0 chr15 34247821 34247848 -69247126 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 5 846 235 346 13 0 chr15 34247848 34247926 -69247048 - ID4_ SINE ID -4 79 1 5 846 378 0 0 0 chr15 34248029 34248071 -69246903 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 846 585 213 8 0 chr15 34248208 34248330 -69246644 + ORR1D1 LTR MaLR 12 134 -240 5 846 721 178 21 49 chr15 34248398 34248540 -69246434 - B1_Mur2 SINE Alu -9 140 3 5 846 890 216 115 30 chr15 34248540 34248774 -69246200 + ORR1D1 LTR MaLR 121 374 0 5 846 2905 137 34 26 chr15 34249115 34249610 -69245364 - RLTR19 LTR ERVK 0 499 1 5 846 235 323 196 19 chr15 34250000 34250158 -69244816 - MIRb SINE MIR -21 247 62 5 846 420 215 0 0 chr15 34250586 34250693 -69244281 + (TG)n Simple_repeat Simple_repeat 1 107 0 5 846 470 180 0 53 chr15 34250695 34250789 -69244185 - B4A SINE B4 0 292 204 5 846 785 178 394 17 chr15 34250782 34251079 -69243895 - MTC LTR MaLR -10 409 1 5 846 396 282 120 21 chr15 34251079 34251268 -69243706 - B4A SINE B4 -83 209 2 5 846 301 268 0 44 chr15 34251389 34251479 -69243495 - HAL1-2a_MD LINE L1 -2108 916 831 5 846 300 91 0 0 chr15 34251479 34251523 -69243451 + (TCC)n Simple_repeat Simple_repeat 2 45 0 5 846 213 172 133 33 chr15 34251557 34251617 -69243357 - L3 LINE CR1 -873 3616 3551 5 846 314 268 124 127 chr15 34251914 34252333 -69242641 - RMER21B LTR ERV1 -332 510 93 5 846 21 71 0 0 chr15 34252836 34252878 -69242096 + AT_rich Low_complexity Low_complexity 1 42 0 5 846 830 287 32 46 chr15 34253015 34253284 -69241690 - MLT1B LTR MaLR -6 384 117 5 846 378 271 81 52 chr15 34253284 34253420 -69241554 - B1F SINE Alu -9 140 1 5 846 830 287 32 46 chr15 34253420 34253431 -69241543 - MLT1B LTR MaLR -274 116 108 5 846 573 239 26 0 chr15 34253444 34253561 -69241413 - ID_B1 SINE B4 -1 223 104 5 846 244 289 82 72 chr15 34253491 34253588 -69241386 - PB1D7 SINE Alu -22 98 1 5 846 591 85 0 0 chr15 34254645 34254727 -69240247 + (TC)n Simple_repeat Simple_repeat 1 82 0 5 846 276 278 42 0 chr15 34254994 34255066 -69239908 - L2a LINE L2 -1 3425 3351 5 846 243 0 0 0 chr15 34255195 34255222 -69239752 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 6 846 949 152 0 7 chr15 34255223 34255369 -69239605 - B1_Mus1 SINE Alu -1 147 3 6 846 417 200 0 143 chr15 34255258 34255379 -69239595 - MT2B LTR ERVL -337 264 162 6 846 1760 168 200 3 chr15 34255379 34255719 -69239255 - MTB_Mm LTR MaLR 0 407 1 6 846 417 200 0 143 chr15 34255719 34255737 -69239237 - MT2B LTR ERVL -440 161 145 6 846 531 0 0 0 chr15 34256009 34256068 -69238906 + (TA)n Simple_repeat Simple_repeat 2 60 0 6 846 1351 163 211 19 chr15 34256831 34257143 -69237831 - ORR1D1 LTR MaLR -2 372 1 6 846 1342 94 39 0 chr15 34257236 34257416 -69237558 - B2_Mm2 SINE B2 -7 188 2 6 846 1178 114 40 6 chr15 34257427 34257604 -69237370 - B2_Mm2 SINE B2 -9 186 4 6 846 1452 255 106 12 chr15 34257614 34258019 -69236955 - RMER15-int LTR ERVL -392 4607 4165 6 846 37 62 0 0 chr15 34258129 34258194 -69236780 + AT_rich Low_complexity Low_complexity 1 65 0 6 846 1901 330 107 53 chr15 34258243 34258975 -69235999 - RMER15-int LTR ERVL -2775 2224 1469 6 846 432 0 0 0 chr15 34258980 34259028 -69235946 + (TC)n Simple_repeat Simple_repeat 2 49 0 6 846 925 122 13 45 chr15 34259028 34259177 -69235797 - B1_Mur4 SINE Alu -5 145 1 6 846 1901 330 107 53 chr15 34259177 34259566 -69235408 - RMER15-int LTR ERVL -3531 1468 1042 6 846 246 311 83 8 chr15 34259566 34259699 -69235275 - L2a LINE L2 -582 2837 2695 5 846 528 68 0 0 chr15 34259881 34259954 -69235020 + (TG)n Simple_repeat Simple_repeat 2 74 0 6 846 268 250 193 53 chr15 34259984 34260098 -69234876 + MIRb SINE MIR 43 172 -96 6 846 183 278 275 9 chr15 34260438 34260547 -69234427 - MIRb SINE MIR -31 237 100 6 846 345 50 50 0 chr15 34262065 34262125 -69232849 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 846 1203 61 0 7 chr15 34266771 34266919 -69228055 + B1_Mus1 SINE Alu 2 148 0 6 846 1096 95 0 12 chr15 34266921 34267091 -69227883 + (GAAA)n Simple_repeat Simple_repeat 1 168 0 6 846 193 345 12 12 chr15 34267190 34267275 -69227699 + L2 LINE L2 731 815 -2604 6 846 182 300 144 9 chr15 34267446 34267557 -69227417 + L2 LINE L2 1194 1319 -2100 6 846 190 322 119 79 chr15 34267686 34267787 -69227187 - L3 LINE CR1 -1278 3211 3107 6 846 198 0 0 0 chr15 34267966 34267988 -69226986 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 6 846 226 386 63 26 chr15 34268206 34268395 -69226579 + MIRb SINE MIR 43 238 -30 6 846 528 287 89 89 chr15 34268522 34268702 -69226272 + B4 SINE B4 82 261 -31 6 846 228 35 0 0 chr15 34268717 34268746 -69226228 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 846 381 279 0 0 chr15 34269954 34270094 -69224880 + (CA)n Simple_repeat Simple_repeat 1 140 0 6 846 477 349 45 6 chr15 34270186 34270362 -69224612 + MER5A DNA MER1_type 7 189 0 6 846 805 232 122 19 chr15 34271753 34272016 -69222958 + B4A SINE B4 1 290 -2 6 846 347 264 0 0 chr15 34272475 34272547 -69222427 - ID4_ SINE ID 0 83 12 6 846 220 246 17 34 chr15 34272891 34272950 -69222024 + CT-rich Low_complexity Low_complexity 4 61 0 6 846 911 233 42 5 chr15 34272968 34273158 -69221816 - B3 SINE B2 0 216 20 6 846 750 282 56 22 chr15 34273575 34273807 -69221167 + MTD LTR MaLR 21 260 -159 6 846 2787 135 44 56 chr15 34273865 34274384 -69220590 - RLTR28 LTR ERVL 0 524 12 6 846 423 52 0 0 chr15 34274472 34274530 -69220444 + (GTTTG)n Simple_repeat Simple_repeat 2 59 0 6 846 627 197 89 8 chr15 34274537 34274660 -69220314 - B1_Mur4 SINE Alu -16 134 2 6 846 1348 97 5 11 chr15 34275537 34275724 -69219250 + B2_Mm1t SINE B2 2 187 -6 6 846 546 79 0 0 chr15 34275741 34275817 -69219157 + (TG)n Simple_repeat Simple_repeat 2 77 0 6 846 476 293 31 31 chr15 34275819 34275946 -69219028 - RSINE1 SINE B4 -13 152 26 6 846 29 28 0 0 chr15 34276265 34276301 -69218673 + AT_rich Low_complexity Low_complexity 1 36 0 6 846 3382 161 4 4 chr15 34276301 34276836 -69218138 - Lx4A LINE L1 -5 7053 6519 6 846 888 164 36 0 chr15 34276864 34277004 -69217970 - B1_Mur4 SINE Alu -5 145 1 6 846 468 303 99 62 chr15 34277016 34277227 -69217747 - ID_B1 SINE B4 -5 219 1 6 846 810 171 0 0 chr15 34278136 34278265 -69216709 - B3 SINE B2 -86 130 2 6 846 209 325 69 31 chr15 34278792 34278922 -69216052 - MIRb SINE MIR -48 220 86 6 846 285 256 13 13 chr15 34279209 34279288 -69215686 + RSINE1 SINE B4 2 80 -85 6 846 348 24 0 0 chr15 34279447 34279488 -69215486 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 846 544 87 39 0 chr15 34279490 34279593 -69215381 + (CAGAGA)n Simple_repeat Simple_repeat 2 108 0 6 846 359 281 31 0 chr15 34279653 34279749 -69215225 + B1F SINE Alu 42 140 -9 6 846 197 277 133 14 chr15 34279811 34279954 -69215020 - MIRb SINE MIR -73 195 36 6 846 490 146 21 0 chr15 34280082 34280178 -69214796 + (TCTA)n Simple_repeat Simple_repeat 3 100 0 6 846 513 252 0 18 chr15 34280770 34280883 -69214091 + PB1D10 SINE Alu 5 115 -2 6 846 591 104 0 0 chr15 34280939 34281045 -69213929 + (TC)n Simple_repeat Simple_repeat 1 106 0 6 846 368 221 93 0 chr15 34281058 34281144 -69213830 - PB1D9 SINE Alu -9 111 18 6 846 450 0 0 0 chr15 34281144 34281194 -69213780 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 846 231 163 0 0 chr15 34281251 34281294 -69213680 + Lx4A LINE L1 7011 7053 -5 6 846 32 0 0 0 chr15 34281321 34281353 -69213621 + AT_rich Low_complexity Low_complexity 1 32 0 6 846 1396 82 16 16 chr15 34281362 34281549 -69213425 + B2_Mm2 SINE B2 1 187 -8 6 846 610 323 63 33 chr15 34282114 34282415 -69212559 + MER82 DNA MER2_type 2 311 -342 6 846 578 329 55 21 chr15 34282429 34282718 -69212256 + MER82 DNA MER2_type 352 650 -3 6 846 1028 144 88 0 chr15 34282920 34283114 -69211860 + B3 SINE B2 6 216 0 6 846 195 311 16 78 chr15 34283194 34283323 -69211651 - MIR SINE MIR -41 221 101 6 846 645 149 263 8 chr15 34283472 34283637 -69211337 - MTD LTR MaLR -8 411 194 6 846 1269 71 0 0 chr15 34283637 34283806 -69211168 + (TTTCC)n Simple_repeat Simple_repeat 5 173 0 6 846 310 241 238 39 chr15 34283806 34283821 -69211153 - MTD LTR MaLR -203 193 180 6 846 223 234 0 21 chr15 34283821 34283869 -69211105 + CT-rich Low_complexity Low_complexity 4 50 0 6 846 843 134 0 0 chr15 34283877 34284004 -69210970 - B1_Mur2 SINE Alu -21 128 2 6 846 767 212 95 0 chr15 34284004 34284172 -69210802 - MTD LTR MaLR -209 210 26 6 846 1191 36 0 0 chr15 34284499 34284637 -69210337 + B1_Mus1 SINE Alu 2 139 -9 6 846 807 11 0 0 chr15 34284637 34284729 -69210245 + (GAA)n Simple_repeat Simple_repeat 2 93 0 6 846 321 237 83 25 chr15 34285525 34285646 -69209328 + L1MA4 LINE L1 5798 5925 -375 6 846 198 0 0 0 chr15 34285652 34285674 -69209300 + (TA)n Simple_repeat Simple_repeat 2 23 0 6 846 231 146 0 0 chr15 34286360 34286401 -69208573 + (TCC)n Simple_repeat Simple_repeat 2 42 0 6 846 24 32 0 0 chr15 34287057 34287088 -69207886 + AT_rich Low_complexity Low_complexity 1 31 0 6 846 972 222 25 0 chr15 34287464 34287667 -69207307 - B3 SINE B2 -5 211 4 6 846 662 177 6 0 chr15 34287668 34287826 -69207148 + CT-rich Low_complexity Low_complexity 1 159 0 6 846 514 294 83 7 chr15 34287850 34287994 -69206980 - B3A SINE B2 -42 156 2 6 846 256 320 9 65 chr15 34288383 34288490 -69206484 + MIRb SINE MIR 60 160 -108 6 846 206 237 51 0 chr15 34289011 34289070 -69205904 - L3 LINE CR1 -212 4277 4216 6 846 3291 158 108 10 chr15 34289382 34290010 -69204964 - RMER6C LTR ERVK 0 690 1 6 846 693 199 14 47 chr15 34290169 34290317 -69204657 - B1F1 SINE Alu -6 143 1 6 846 33 0 0 0 chr15 34290317 34290350 -69204624 + AT_rich Low_complexity Low_complexity 1 33 0 6 846 495 118 0 0 chr15 34290350 34290426 -69204548 + (TA)n Simple_repeat Simple_repeat 1 76 0 6 846 342 0 0 0 chr15 34290426 34290464 -69204510 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 846 916 198 19 0 chr15 34290465 34290622 -69204352 - B3 SINE B2 -51 165 6 6 846 1085 102 0 7 chr15 34290961 34291109 -69203865 + B1_Mus2 SINE Alu 1 147 0 6 846 228 67 0 0 chr15 34291109 34291139 -69203835 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 6 846 888 77 138 0 chr15 34291211 34291341 -69203633 - B1_Mus1 SINE Alu 0 148 1 6 846 227 172 0 33 chr15 34291343 34291403 -69203571 + (TTTG)n Simple_repeat Simple_repeat 4 61 0 6 846 10653 87 19 6 chr15 34291465 34293024 -69201950 - MusHAL1 LINE L1 -631 2081 503 6 846 523 249 47 17 chr15 34293034 34293206 -69201768 - B4A SINE B4 -114 178 2 6 846 1047 289 70 70 chr15 34293208 34293936 -69201038 + L1ME1 LINE L1 3724 4431 -1715 6 846 808 161 14 7 chr15 34293936 34294080 -69200894 - B1_Mur4 SINE Alu -1 149 5 6 846 1047 289 70 70 chr15 34294080 34294289 -69200685 + L1ME1 LINE L1 4432 4661 -1485 6 846 297 0 0 0 chr15 34294490 34294523 -69200451 + (TATG)n Simple_repeat Simple_repeat 2 34 0 6 846 486 251 0 0 chr15 34294540 34294719 -69200255 + (CATATA)n Simple_repeat Simple_repeat 1 179 0 6 846 917 281 96 23 chr15 34294720 34295117 -69199857 + MER82 DNA MER2_type 215 640 -13 6 846 7580 84 18 15 chr15 34295329 34296349 -69198625 - RLTR13D5 LTR ERVK 0 1023 1 6 846 415 227 128 63 chr15 34296376 34296600 -69198374 + L1ME1 LINE L1 5080 5357 -822 6 846 260 263 25 38 chr15 34296600 34296679 -69198295 + ID4_ SINE ID 2 79 -4 6 846 415 215 47 103 chr15 34296679 34296800 -69198174 + L1ME1 LINE L1 5358 5470 -709 6 846 428 325 25 31 chr15 34296812 34296971 -69198003 - B3A SINE B2 -3 213 56 6 846 606 284 94 31 chr15 34296990 34297350 -69197624 + L1ME1 LINE L1 5529 5911 -268 6 846 443 206 98 15 chr15 34297376 34297410 -69197564 - RLTR11B LTR ERVK -26 427 393 6 846 267 31 0 0 chr15 34297410 34297442 -69197532 + (ATTG)n Simple_repeat Simple_repeat 3 34 0 6 846 443 206 98 15 chr15 34297442 34297540 -69197434 - RLTR11B LTR ERVK -61 392 284 6 846 625 268 59 69 chr15 34297606 34297895 -69197079 - RLTR11B LTR ERVK -167 286 1 6 846 1388 87 11 0 chr15 34298052 34298235 -69196739 - B2_Mm1t SINE B2 -8 185 1 6 846 211 269 25 37 chr15 34298237 34298318 -69196656 - PB1D10 SINE Alu -1 116 37 6 846 214 149 45 0 chr15 34299079 34299146 -69195828 + (CAGAGA)n Simple_repeat Simple_repeat 2 71 0 6 846 393 70 0 0 chr15 34299780 34299837 -69195137 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 846 326 243 0 0 chr15 34299838 34299912 -69195062 - B3 SINE B2 -70 146 73 7 846 1149 68 7 0 chr15 34301334 34301480 -69193494 - B1_Mus2 SINE Alu 0 147 1 7 846 419 208 104 0 chr15 34301579 34301685 -69193289 - MER63B DNA AcHobo -11 425 309 7 846 793 151 72 0 chr15 34302055 34302207 -69192767 - B2_Mm2 SINE B2 -32 163 1 7 846 501 62 0 0 chr15 34303301 34303366 -69191608 + (CCCTG)n Simple_repeat Simple_repeat 2 66 0 7 846 238 200 53 0 chr15 34303368 34303443 -69191531 + CT-rich Low_complexity Low_complexity 5 83 0 7 846 676 214 177 11 chr15 34303451 34303626 -69191348 - B4 SINE B4 -81 211 8 7 846 1092 46 0 0 chr15 34303849 34303979 -69190995 + B1_Mus1 SINE Alu 1 130 -18 7 846 1257 90 0 0 chr15 34303979 34304156 -69190818 + (GGAA)n Simple_repeat Simple_repeat 1 177 0 7 846 970 194 14 42 chr15 34305109 34305324 -69189650 + B3 SINE B2 4 212 -4 7 846 767 237 60 103 chr15 34305469 34305654 -69189320 - B4 SINE B4 0 292 106 7 846 1079 27 40 33 chr15 34305654 34305805 -69189169 + L1Md_F3 LINE L1 6433 6584 0 7 846 767 237 60 103 chr15 34305805 34305920 -69189054 - B4 SINE B4 -187 105 5 7 846 991 63 106 6 chr15 34306038 34306198 -69188776 + B2_Mm2 SINE B2 13 188 -7 7 846 785 325 82 17 chr15 34306214 34306630 -69188344 + Lx8 LINE L1 6947 7389 -84 7 846 494 260 144 0 chr15 34306722 34306895 -69188079 + B3A SINE B2 1 198 0 7 846 1724 195 33 14 chr15 34307538 34307897 -69187077 - ORR1B2 LTR MaLR -1 366 1 7 846 1258 34 0 0 chr15 34309408 34309555 -69185419 - B1_Mm SINE Alu 0 147 1 7 846 225 290 43 0 chr15 34311220 34311289 -69183685 - MLT1A1 LTR MaLR 0 408 337 7 846 396 0 0 0 chr15 34311434 34311478 -69183496 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 846 276 268 262 24 chr15 34311481 34311607 -69183367 - B3 SINE B2 -47 169 14 7 846 426 287 26 0 chr15 34311608 34311723 -69183251 - MLT1A1 LTR MaLR -286 122 5 7 846 186 283 0 19 chr15 34312016 34312078 -69182896 + MIR SINE MIR 107 174 -94 7 846 298 148 0 0 chr15 34312223 34312277 -69182697 - ORR1D2 LTR MaLR 0 370 317 7 846 248 329 146 0 chr15 34312978 34313060 -69181914 + B1F1 SINE Alu 5 98 -51 7 846 487 348 16 6 chr15 34313582 34313764 -69181210 - MER5A DNA MER1_type 0 189 6 7 846 1804 66 0 0 chr15 34313996 34314222 -69180752 - L1_Mus1 LINE L1 -534 6033 5808 7 846 2795 36 0 20 chr15 34314233 34314574 -69180400 + L1_Mus1 LINE L1 6234 6567 0 7 846 257 277 15 30 chr15 34314973 34315040 -69179934 + tRNA-Ala-GCY_ tRNA tRNA 2 67 -8 7 846 285 247 16 0 chr15 34314982 34315057 -69179917 + ID2 SINE ID 15 90 -62 7 846 346 272 77 49 chr15 34315232 34315375 -69179599 - RSINE1 SINE B4 -15 150 4 7 846 238 319 54 54 chr15 34315479 34315628 -69179346 + L2a LINE L2 2488 2636 -783 7 846 232 273 79 20 chr15 34315644 34315745 -69179229 - MLT1C LTR MaLR -12 455 349 7 846 722 78 49 22 chr15 34315846 34316074 -69178900 + (TG)n Simple_repeat Simple_repeat 1 234 0 7 846 1163 152 4 34 chr15 34316074 34316312 -69178662 - RMER17C LTR ERVK 0 410 180 7 846 514 72 64 35 chr15 34316339 34316511 -69178463 + (TG)n Simple_repeat Simple_repeat 1 177 0 7 846 301 313 0 24 chr15 34316557 34316642 -69178332 - RSINE1 SINE B4 -8 157 75 7 846 246 242 93 112 chr15 34316633 34316740 -69178234 - PB1D7 SINE Alu -6 114 10 7 846 233 354 30 10 chr15 34316693 34316793 -69178181 - B4A SINE B4 -149 143 42 7 846 2144 143 116 26 chr15 34316833 34317292 -69177682 - RLTR16 LTR ERVK 0 505 6 7 846 397 320 173 20 chr15 34317442 34317847 -69177127 + L2a LINE L2 2958 3424 -2 7 846 724 276 0 6 chr15 34320258 34320426 -69174548 + B4A SINE B4 121 287 -5 7 846 23 33 0 0 chr15 34321427 34321457 -69173517 + AT_rich Low_complexity Low_complexity 1 30 0 7 846 976 232 5 0 chr15 34321594 34321784 -69173190 + B3 SINE B2 1 191 -25 7 846 399 148 15 53 chr15 34321936 34322102 -69172872 - ORR1B2 LTR MaLR -248 146 1 7 846 564 216 0 36 chr15 34322102 34322255 -69172719 - ORR1C2 LTR MaLR -255 139 7 7 846 396 180 214 0 chr15 34322558 34322647 -69172327 + B1_Mur4 SINE Alu 43 150 0 7 846 711 243 104 0 chr15 34322692 34322914 -69172060 + Lx9 LINE L1 7218 7462 -182 7 846 277 339 29 12 chr15 34323569 34323739 -69171235 - RLTR6-int LTR ERV1 -2064 5714 5542 7 846 1304 321 78 54 chr15 34323854 34324930 -69170044 - RLTR6-int LTR ERV1 -1051 4012 2911 7 846 1347 319 66 43 chr15 34324950 34326476 -69168498 - RLTR6-int LTR ERV1 -4890 2716 1186 7 846 457 312 68 26 chr15 34327057 34327313 -69167661 - RLTR6-int LTR ERV1 -6879 899 614 7 846 318 132 0 0 chr15 34329501 34329554 -69165420 + (CA)n Simple_repeat Simple_repeat 1 53 0 7 846 352 174 11 23 chr15 34329838 34329926 -69165048 + CT-rich Low_complexity Low_complexity 4 90 0 7 846 288 289 38 19 chr15 34329941 34330047 -69164927 - PB1D7 SINE Alu -1 119 12 7 846 225 0 48 48 chr15 34330934 34330976 -69163998 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 7 846 1256 38 0 0 chr15 34330976 34331136 -69163838 - B2_Mm1t SINE B2 -33 160 1 7 846 429 167 0 29 chr15 34331210 34331315 -69163659 + CT-rich Low_complexity Low_complexity 1 102 0 7 846 695 228 55 0 chr15 34332898 34333044 -69161930 + B3 SINE B2 1 153 -63 7 846 478 29 14 14 chr15 34333044 34333113 -69161861 + (CATA)n Simple_repeat Simple_repeat 2 70 0 7 846 482 267 47 53 chr15 34333113 34333156 -69161818 + B2_Mm2 SINE B2 143 189 -6 7 846 436 313 9 9 chr15 34333176 34333292 -69161682 + PB1D10 SINE Alu 2 117 0 7 846 2005 118 75 0 chr15 34333340 34333646 -69161328 + ORR1A4 LTR MaLR 1 329 0 7 846 9788 137 57 112 chr15 34333646 34335724 -69159250 + ORR1A4-int LTR MaLR 1 1963 0 7 846 1763 128 101 26 chr15 34335724 34336030 -69158944 + ORR1A4 LTR MaLR 1 329 0 7 846 1023 76 76 0 chr15 34336122 34336254 -69158720 + B1_Mus2 SINE Alu 1 142 -5 7 846 184 30 29 29 chr15 34336266 34336300 -69158674 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 7 846 323 355 102 0 chr15 34336409 34336606 -69158368 + MIRb SINE MIR 26 242 -26 7 846 218 200 0 0 chr15 34338100 34338150 -69156824 + T-rich Low_complexity Low_complexity 1 50 0 7 846 2043 165 274 54 chr15 34338361 34338862 -69156112 - RMER19C LTR ERVK 0 611 1 7 846 1239 223 144 8 chr15 34339014 34339376 -69155598 - MTD LTR MaLR 0 419 9 7 105 3341 38 2 2 chr15 34340743 34341139 -69153835 - MTA_Mm LTR MaLR 0 396 1 7 847 269 57 0 0 chr15 34341352 34341387 -69153587 + U2 snRNA snRNA 1 35 -153 7 847 822 178 14 0 chr15 34341405 34341551 -69153423 + B1_Mur4 SINE Alu 3 150 0 7 847 198 0 0 0 chr15 34342839 34342861 -69152113 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 7 847 470 271 74 107 chr15 34343794 34344038 -69150936 - MLT1A LTR MaLR 0 374 139 7 847 419 299 59 7 chr15 34344039 34344174 -69150800 + RSINE1 SINE B4 3 144 -21 7 847 489 205 0 0 chr15 34344202 34344319 -69150655 + (ATG)n Simple_repeat Simple_repeat 3 119 0 7 847 333 213 42 21 chr15 34345460 34345556 -69149418 + MIR3 SINE MIR 90 187 -21 7 847 827 197 4 6 chr15 34346010 34346190 -69148784 - ORR1C2 LTR MaLR -194 180 3 7 847 317 187 10 10 chr15 34346190 34346260 -69148714 - ORR1C2-int LTR MaLR -51 1529 1460 7 847 1695 193 75 8 chr15 34346314 34346701 -69148273 - RLTR16 LTR ERVK -12 493 81 7 847 1750 94 0 4 chr15 34346819 34347064 -69147910 - L1_Mus2 LINE L1 0 6566 6323 7 847 354 181 28 0 chr15 34347068 34347140 -69147834 - RLTR16 LTR ERVK -431 74 1 7 847 3339 229 121 96 chr15 34347141 34347261 -69147713 - ORR1C2-int LTR MaLR -44 1326 1218 7 847 549 15 0 0 chr15 34347261 34347329 -69147645 + L1_Mus2 LINE L1 6498 6565 -1 7 847 3339 229 121 96 chr15 34347329 34348477 -69146497 - ORR1C2-int LTR MaLR -153 1217 26 7 847 1589 166 72 112 chr15 34348490 34348890 -69146084 - ORR1C2 LTR MaLR 0 384 1 7 847 203 349 23 38 chr15 34349995 34350126 -69144848 + MIRc SINE MIR 65 193 -75 7 847 940 189 11 17 chr15 34350320 34350498 -69144476 + B2_Mm2 SINE B2 1 177 -18 7 847 309 26 0 0 chr15 34350525 34350563 -69144411 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 7 847 287 265 269 0 chr15 34351049 34351268 -69143706 + L2a LINE L2 2596 2873 -546 7 847 399 56 0 0 chr15 34351507 34351561 -69143413 + (TA)n Simple_repeat Simple_repeat 2 55 0 7 847 190 328 16 0 chr15 34351565 34351629 -69143345 + L2a LINE L2 3352 3416 -10 7 847 331 243 62 23 chr15 34351633 34351737 -69143237 + PB1D10 SINE Alu 3 118 -2 7 847 331 301 9 0 chr15 34352308 34352421 -69142553 + L1MC3 LINE L1 7515 7628 -157 7 847 587 239 37 0 chr15 34352421 34352555 -69142419 + B1_Mur1 SINE Alu 1 139 -10 7 847 945 234 5 10 chr15 34352624 34352818 -69142156 + B3A SINE B2 4 196 -2 7 847 369 247 0 13 chr15 34352831 34352909 -69142065 + ID4 SINE ID 2 78 -5 7 847 188 319 54 22 chr15 34353029 34353133 -69141841 - MIRc SINE MIR -115 161 55 7 847 1142 243 46 0 chr15 34354082 34354345 -69140629 + B4A SINE B4 10 284 -8 7 847 265 208 0 0 chr15 34354470 34354523 -69140451 - MLT2D LTR ERVL -48 511 459 7 847 588 217 52 19 chr15 34354522 34354677 -69140297 - MLT2D LTR ERVL -203 211 52 7 847 297 0 0 0 chr15 34354677 34354710 -69140264 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 7 847 763 200 271 0 chr15 34356386 34356556 -69138418 + B3 SINE B2 1 216 0 7 847 369 43 0 0 chr15 34356594 34356641 -69138333 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 847 1484 68 0 20 chr15 34357156 34357352 -69137622 - B2_Mm2 SINE B2 -2 193 2 7 847 775 144 347 0 chr15 34357698 34357865 -69137109 + URR1B DNA MER1_type 1 225 0 7 847 466 250 62 0 chr15 34359019 34359131 -69135843 - B3 SINE B2 -86 130 12 7 847 283 290 11 21 chr15 34359162 34359257 -69135717 + GA-rich Low_complexity Low_complexity 2 95 0 7 847 367 233 122 0 chr15 34359273 34359363 -69135611 - B1F SINE Alu -32 117 17 7 847 279 286 0 61 chr15 34360572 34360654 -69134320 + PB1D10 SINE Alu 28 104 -13 7 847 1616 37 5 0 chr15 34360826 34361014 -69133960 + B2_Mm1t SINE B2 2 190 -3 7 847 675 129 0 0 chr15 34361652 34361753 -69133221 - B2_Mm2 SINE B2 -94 101 1 7 847 2462 148 96 20 chr15 34363362 34363852 -69131122 - RLTR11A2 LTR ERVK 0 527 1 7 847 231 114 0 0 chr15 34363923 34363958 -69131016 + (T)n Simple_repeat Simple_repeat 1 35 0 8 847 840 115 22 0 chr15 34364131 34364270 -69130704 + B2_Mm1t SINE B2 38 179 -14 8 847 292 94 54 54 chr15 34364292 34364348 -69130626 + B2_Mm2 SINE B2 46 101 -94 8 847 1136 68 0 20 chr15 34365148 34365298 -69129676 + B1_Mus2 SINE Alu 1 147 0 8 847 306 242 42 52 chr15 34366044 34366140 -69128834 - PB1D10 SINE Alu -50 99 5 8 847 1186 57 0 0 chr15 34366526 34366667 -69128307 - B1_Mus1 SINE Alu -7 141 1 8 847 582 293 72 5 chr15 34366678 34366887 -69128087 - ID_B1 SINE B4 0 224 2 8 847 249 233 131 0 chr15 34366901 34366970 -69128004 + PB1D9 SINE Alu 36 113 -36 8 847 522 78 423 19 chr15 34367089 34367193 -69127781 + B1_Mus2 SINE Alu 2 147 0 8 847 246 32 0 0 chr15 34367193 34367224 -69127750 + (A)n Simple_repeat Simple_repeat 1 31 0 8 847 762 143 266 47 chr15 34367775 34367944 -69127030 + B3 SINE B2 2 207 -9 8 847 322 282 36 18 chr15 34368157 34368269 -69126705 + B3 SINE B2 90 203 -13 8 847 360 215 0 0 chr15 34368340 34368405 -69126569 + B3 SINE B2 110 174 -42 8 847 1167 35 14 20 chr15 34368707 34368855 -69126119 + B1_Mm SINE Alu 1 147 0 8 847 201 154 0 0 chr15 34369172 34369211 -69125763 + T-rich Low_complexity Low_complexity 1 39 0 8 847 931 75 105 0 chr15 34369211 34369344 -69125630 - B1_Mm SINE Alu 0 147 1 8 847 466 311 126 13 chr15 34369809 34370047 -69124927 + B4A SINE B4 1 265 -27 8 847 21 0 0 0 chr15 34370960 34370981 -69123993 + AT_rich Low_complexity Low_complexity 1 21 0 8 847 313 217 132 0 chr15 34371416 34371499 -69123475 + B3A SINE B2 2 95 -103 8 847 353 301 103 0 chr15 34373506 34373642 -69121332 + RSINE1 SINE B4 6 155 -10 8 847 755 236 92 84 chr15 34373789 34374062 -69120912 + B4 SINE B4 2 276 -16 8 847 497 42 139 0 chr15 34374461 34374533 -69120441 - B1_Mus2 SINE Alu -6 141 60 8 847 234 0 0 0 chr15 34374860 34374886 -69120088 + (T)n Simple_repeat Simple_repeat 1 26 0 8 847 1198 62 0 0 chr15 34374888 34375032 -69119942 - B1_Mm SINE Alu -1 146 3 8 847 1494 48 32 0 chr15 34375035 34375223 -69119751 - B2_Mm2 SINE B2 0 195 2 8 847 636 255 53 84 chr15 34375580 34375807 -69119167 + ID_B1 SINE B4 4 223 -1 8 847 1242 34 0 0 chr15 34375925 34376071 -69118903 - B1_Mm SINE Alu 0 147 2 8 847 3612 58 0 2 chr15 34376143 34376588 -69118386 - L1_Mus1 LINE L1 -3 6564 6121 8 847 312 223 10 78 chr15 34376598 34376700 -69118274 + PB1D9 SINE Alu 25 119 -1 8 847 716 222 114 0 chr15 34376713 34376880 -69118094 + MTD LTR MaLR 232 417 -2 8 847 1198 86 0 0 chr15 34377314 34377477 -69117497 + B2_Mm2 SINE B2 1 163 -32 8 847 1168 117 26 26 chr15 34377484 34377677 -69117297 + B2_Mm2 SINE B2 2 194 -1 8 847 474 181 235 25 chr15 34377677 34377795 -69117179 + B1_Mur4 SINE Alu 1 144 -6 8 847 603 140 8 50 chr15 34378604 34378724 -69116250 + B1_Mus2 SINE Alu 33 147 0 8 847 285 284 93 43 chr15 34379007 34379169 -69115805 - ERVL-E-int LTR ERVL -1103 4564 4395 8 847 300 221 9 128 chr15 34379201 34379310 -69115664 - PB1 SINE Alu -2 125 30 8 847 3512 28 2 0 chr15 34379328 34379723 -69115251 - MTA_Mm LTR MaLR 0 396 1 8 847 448 259 44 101 chr15 34379868 34380027 -69114947 + B4A SINE B4 2 151 -141 8 847 496 183 92 34 chr15 34380125 34380244 -69114730 + B1_Mur4 SINE Alu 25 150 0 8 847 243 0 0 0 chr15 34380330 34380357 -69114617 + (CA)n Simple_repeat Simple_repeat 1 27 0 8 847 279 79 0 0 chr15 34380378 34380416 -69114558 + (T)n Simple_repeat Simple_repeat 1 38 0 8 847 1190 55 0 0 chr15 34380416 34380562 -69114412 - B1_Mus2 SINE Alu 0 147 2 8 847 597 96 53 0 chr15 34381047 34381141 -69113833 + B2_Mm2 SINE B2 1 99 -96 8 847 962 39 0 8 chr15 34381184 34381312 -69113662 - B1_Mm SINE Alu 0 147 21 8 847 463 141 11 32 chr15 34381314 34381409 -69113565 + B2_Mm2 SINE B2 84 176 -19 8 847 630 241 84 0 chr15 34381635 34381801 -69113173 + MLT1B LTR MaLR 211 390 0 8 847 677 270 144 16 chr15 34381801 34382113 -69112861 + L1MC4 LINE L1 7011 7362 -680 8 847 922 186 98 0 chr15 34382291 34382474 -69112500 + B3 SINE B2 1 201 -15 8 847 867 116 0 76 chr15 34382484 34382642 -69112332 + B1_Mus2 SINE Alu 2 147 0 8 847 339 208 12 61 chr15 34382647 34382729 -69112245 + B1_Mur2 SINE Alu 67 144 -5 8 847 23 0 0 0 chr15 34382734 34382757 -69112217 + AT_rich Low_complexity Low_complexity 1 23 0 8 847 492 18 0 0 chr15 34384204 34384261 -69110713 + (TA)n Simple_repeat Simple_repeat 1 57 0 8 847 243 0 0 0 chr15 34384870 34384897 -69110077 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 847 892 154 0 0 chr15 34385622 34385765 -69109209 + B1_Mur4 SINE Alu 8 150 0 8 847 350 195 31 3 chr15 34385827 34385931 -69109043 - PB1D9 SINE Alu 0 149 36 8 847 1684 201 130 0 chr15 34385970 34386338 -69108636 - MTD LTR MaLR -1 418 3 8 847 1017 228 24 0 chr15 34386484 34386695 -69108279 - B3 SINE B2 0 216 1 8 847 352 279 41 35 chr15 34386962 34386976 -69107998 + L1MA9 LINE L1 5950 5962 -350 8 847 3245 91 7 0 chr15 34386976 34387407 -69107567 - RLTR10C LTR ERVK -2 434 1 8 847 352 279 41 35 chr15 34387407 34387537 -69107437 + L1MA9 LINE L1 5963 6095 -217 8 847 398 221 85 54 chr15 34387605 34387734 -69107240 + RSINE1 SINE B4 8 140 -25 8 847 825 138 85 0 chr15 34387746 34387876 -69107098 + B1_Mus2 SINE Alu 1 141 -6 8 847 737 158 7 0 chr15 34387877 34388016 -69106958 + GA-rich Low_complexity Low_complexity 2 141 0 8 847 218 237 17 0 chr15 34388098 34388157 -69106817 - MIR SINE MIR -71 191 132 8 847 221 275 45 8 chr15 34388373 34388505 -69106469 + (TTATA)n Simple_repeat Simple_repeat 3 139 0 8 847 258 159 23 0 chr15 34388703 34388747 -69106227 - B3A SINE B2 -97 101 57 8 847 322 258 67 11 chr15 34388771 34388876 -69106098 - B4A SINE B4 -45 247 137 8 847 281 194 57 43 chr15 34388895 34388965 -69106009 - B4A SINE B4 -214 78 8 8 847 404 221 138 8 chr15 34390080 34390203 -69104771 - B1F SINE Alu 0 149 11 8 847 180 0 0 0 chr15 34390224 34390244 -69104730 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 8 847 2485 168 46 92 chr15 34390313 34390942 -69104032 - Lx7 LINE L1 0 7696 7097 8 847 211 268 155 0 chr15 34390943 34391014 -69103960 - PB1D10 SINE Alu -8 109 28 8 847 198 0 0 0 chr15 34391048 34391070 -69103904 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 8 847 644 268 118 18 chr15 34391170 34391398 -69103576 - L1MC LINE L1 -2063 5819 5569 8 847 2653 172 40 46 chr15 34392208 34392756 -69102218 - Lx4B LINE L1 -4 7054 6510 8 847 1796 260 29 40 chr15 34392997 34393477 -69101497 + Lx5 LINE L1 6576 7050 0 8 847 180 0 0 0 chr15 34393894 34393914 -69101060 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 8 847 433 104 8 0 chr15 34393923 34393995 -69100979 - B2_Mm2 SINE B2 -95 121 47 8 847 1403 62 11 0 chr15 34394008 34394184 -69100790 - B2_Mm1t SINE B2 -14 179 2 8 847 513 299 26 39 chr15 34394435 34394588 -69100386 + B3A SINE B2 1 151 -47 8 847 535 221 135 16 chr15 34394646 34394839 -69100135 + B3 SINE B2 1 216 0 8 847 880 171 14 14 chr15 34394892 34395040 -69099934 + B1_Mur1 SINE Alu 1 148 -1 8 847 217 277 0 0 chr15 34395081 34395128 -69099846 + ID_B1 SINE B4 95 141 -83 8 847 285 265 201 41 chr15 34395160 34395329 -69099645 + MIR SINE MIR 20 216 -52 8 847 277 239 15 0 chr15 34395389 34395456 -69099518 + MER58A DNA MER1_type 62 129 -95 8 847 541 250 48 18 chr15 34396934 34397101 -69097873 - B3A SINE B2 -18 180 9 8 847 195 42 0 0 chr15 34398165 34398189 -69096785 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 8 847 748 103 0 0 chr15 34398530 34398637 -69096337 + B2_Mm2 SINE B2 1 107 -88 8 847 711 204 28 0 chr15 34399151 34399293 -69095681 - B1F2 SINE Alu 0 149 4 8 847 229 222 19 0 chr15 34399294 34399348 -69095626 - L1M5 LINE L1 -356 5806 5752 8 847 234 323 15 0 chr15 34399443 34399508 -69095466 - tRNA-Ala-GCY_ tRNA tRNA -7 68 3 8 847 335 69 0 33 chr15 34399714 34399774 -69095200 + (TTTTTG)n Simple_repeat Simple_repeat 2 59 0 8 847 22 35 0 0 chr15 34401553 34401582 -69093392 + AT_rich Low_complexity Low_complexity 1 29 0 8 847 606 344 30 47 chr15 34401614 34401910 -69093064 - B4A SINE B4 -1 291 1 8 847 2543 152 34 2 chr15 34402107 34402515 -69092459 - MTC LTR MaLR 0 421 1 8 847 207 0 0 0 chr15 34402826 34402849 -69092125 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 847 1185 41 7 0 chr15 34403203 34403349 -69091625 + B1_Mus2 SINE Alu 1 147 0 8 847 273 304 93 54 chr15 34403722 34404000 -69090974 + B4A SINE B4 2 290 -2 8 847 186 143 0 0 chr15 34404150 34404185 -69090789 + (T)n Simple_repeat Simple_repeat 1 35 0 8 847 335 172 234 11 chr15 34405179 34405273 -69089701 - PB1D9 SINE Alu -5 115 1 8 847 766 191 14 7 chr15 34405383 34405531 -69089443 - B1F2 SINE Alu 0 149 1 8 847 320 204 116 21 chr15 34405554 34405649 -69089325 - PB1D7 SINE Alu -3 117 14 8 847 320 259 0 0 chr15 34405580 34405661 -69089313 - ID_B1 SINE B4 -63 161 81 8 847 294 152 97 107 chr15 34405880 34405983 -69088991 - B1_Mur4 SINE Alu -1 149 48 9 847 799 238 15 45 chr15 34406008 34406021 -69088953 - B3A SINE B2 0 198 183 9 847 597 28 0 0 chr15 34406021 34406092 -69088882 + (TC)n Simple_repeat Simple_repeat 2 72 0 9 847 799 238 15 45 chr15 34406092 34406280 -69088694 - B3A SINE B2 -16 182 4 9 847 250 75 57 0 chr15 34406305 34406358 -69088616 + (CAAAAA)n Simple_repeat Simple_repeat 4 59 0 9 847 822 241 53 39 chr15 34406409 34406451 -69088523 + B3 SINE B2 1 42 -174 9 847 3456 30 5 0 chr15 34406451 34406845 -69088129 + MTA_Mm LTR MaLR 1 396 0 9 847 822 241 53 39 chr15 34406845 34407009 -69087965 + B3 SINE B2 43 210 -6 9 847 1340 77 16 0 chr15 34407851 34408033 -69086941 + B2_Mm1t SINE B2 2 186 -7 9 847 376 243 14 0 chr15 34408365 34408439 -69086535 - ID4_ SINE ID -5 78 4 9 847 759 206 7 7 chr15 34408881 34409028 -69085946 + B1_Mur1 SINE Alu 1 147 -2 9 847 342 151 177 31 chr15 34409102 34409198 -69085776 - ID_B1 SINE B4 -1 223 114 9 847 498 188 98 0 chr15 34409468 34409580 -69085394 - RLTR18B LTR ERVK -93 419 297 9 847 1735 140 92 68 chr15 34409665 34409893 -69085081 - ORR1C1 LTR MaLR 0 378 151 9 847 1098 88 0 39 chr15 34409893 34410046 -69084928 - B1_Mus2 SINE Alu 0 147 1 9 847 1735 140 92 68 chr15 34410046 34410186 -69084788 - ORR1C1 LTR MaLR -228 150 1 9 847 558 206 10 0 chr15 34410286 34410388 -69084586 + RMER10A LTR ERVL 1 103 -339 9 847 1421 17 0 0 chr15 34410388 34410564 -69084410 - MTA_Mm LTR MaLR 0 396 221 9 847 3396 48 0 0 chr15 34410565 34410962 -69084012 - MERVL-int LTR ERVL -1000 4485 4089 9 847 705 72 0 0 chr15 34410962 34411059 -69083915 - B2_Mm2 SINE B2 -98 97 1 9 847 301 51 0 0 chr15 34411059 34411092 -69083882 - MTA_Mm LTR MaLR -361 35 3 9 847 619 191 131 50 chr15 34411094 34411293 -69083681 + RMER10A LTR ERVL 99 313 -129 9 847 645 92 0 0 chr15 34411312 34411410 -69083564 + (GA)n Simple_repeat Simple_repeat 1 98 0 9 847 278 113 19 0 chr15 34411410 34411463 -69083511 + RMER10A LTR ERVL 386 439 -3 9 847 367 273 73 0 chr15 34411989 34412099 -69082875 + RMER15 LTR ERVL 422 539 -36 9 847 304 250 36 91 chr15 34412558 34412650 -69082324 + PB1 SINE Alu 17 106 -21 9 847 2387 105 9 3 chr15 34412650 34412974 -69082000 - ORR1A3 LTR MaLR 0 326 1 9 847 304 250 36 91 chr15 34412974 34412991 -69081983 + PB1 SINE Alu 107 120 -7 9 847 684 254 92 0 chr15 34413023 34413208 -69081766 + B3 SINE B2 8 209 -7 9 847 867 134 58 63 chr15 34413294 34413485 -69081489 - B2_Mm2 SINE B2 -4 191 2 9 847 266 0 0 29 chr15 34413527 34413562 -69081412 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 9 847 1216 41 7 0 chr15 34413562 34413707 -69081267 - B1_Mus1 SINE Alu -2 146 1 9 847 201 171 0 0 chr15 34414464 34414499 -69080475 - MIRc SINE MIR -57 211 177 9 847 185 288 114 9 chr15 34414514 34414619 -69080355 - MIRc SINE MIR -140 128 13 9 847 237 312 55 0 chr15 34415889 34416017 -69078957 - MIR SINE MIR -34 228 94 9 847 372 190 0 0 chr15 34416445 34416524 -69078450 + (TA)n Simple_repeat Simple_repeat 1 79 0 9 847 908 134 28 0 chr15 34416597 34416739 -69078235 + B1_Mur4 SINE Alu 3 148 -2 9 847 1191 43 0 0 chr15 34416884 34417023 -69077951 + B1_Mus1 SINE Alu 2 140 -8 9 847 593 0 28 0 chr15 34417023 34417095 -69077879 + (CCAA)n Simple_repeat Simple_repeat 2 75 0 9 847 723 143 15 31 chr15 34417119 34417249 -69077725 + B2_Mm2 SINE B2 2 129 -66 9 847 250 250 0 0 chr15 34417388 34417440 -69077534 + ID4 SINE ID 31 82 -1 9 847 271 200 192 40 chr15 34417713 34417812 -69077162 + B1F SINE Alu 34 147 -2 9 847 783 220 161 0 chr15 34418006 34418192 -69076782 + B3 SINE B2 1 216 0 9 847 207 162 0 0 chr15 34418451 34418488 -69076486 + (TA)n Simple_repeat Simple_repeat 1 37 0 9 847 791 85 0 99 chr15 34418640 34418771 -69076203 + ORR1A3 LTR MaLR 200 317 -9 9 847 419 250 22 0 chr15 34418979 34419071 -69075903 - B1F1 SINE Alu -8 141 48 9 847 311 342 55 0 chr15 34419215 34419396 -69075578 + RLTR4_MM-int LTR ERV1 599 789 -6812 9 847 875 244 55 0 chr15 34420029 34420230 -69074744 + B3 SINE B2 1 212 -4 9 847 887 205 14 58 chr15 34420254 34420461 -69074513 - B3A SINE B2 0 198 1 9 847 505 264 62 75 chr15 34420502 34420662 -69074312 - RSINE1 SINE B4 0 165 8 9 847 301 294 158 8 chr15 34420711 34420838 -69074136 + B1F SINE Alu 3 148 -1 9 847 683 274 35 44 chr15 34421216 34421445 -69073529 - B4A SINE B4 -21 271 45 9 847 911 48 0 0 chr15 34421700 34421825 -69073149 - B1_Mus2 SINE Alu 0 147 23 9 847 1017 59 0 0 chr15 34421991 34422126 -69072848 + B1_Mus2 SINE Alu 13 147 0 9 847 195 42 0 0 chr15 34422126 34422150 -69072824 + (A)n Simple_repeat Simple_repeat 1 24 0 9 847 190 246 42 28 chr15 34422357 34422428 -69072546 + MIR SINE MIR 74 145 -117 9 847 232 266 31 15 chr15 34422437 34422502 -69072472 - ID4 SINE ID -9 74 9 9 847 740 225 20 71 chr15 34422527 34422723 -69072251 - B3A SINE B2 -12 186 1 9 847 273 219 184 46 chr15 34422735 34422931 -69072043 + MER113 DNA MER1_type 216 438 -83 9 847 249 309 128 0 chr15 34423748 34423842 -69071132 + PB1D7 SINE Alu 1 106 -14 9 847 909 277 13 22 chr15 34424170 34424487 -69070487 + L1MB7 LINE L1 5862 6175 -9 9 847 1646 241 113 57 chr15 34425590 34425807 -69069167 - RCHARR1 DNA MER1_type -70 904 685 9 847 274 0 48 24 chr15 34425807 34425849 -69069125 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 9 847 1060 59 15 0 chr15 34425849 34425985 -69068989 - B1_Mm SINE Alu -9 138 1 9 847 1646 241 113 57 chr15 34425985 34426281 -69068693 - RCHARR1 DNA MER1_type -290 684 383 9 847 878 145 60 16 chr15 34426281 34426463 -69068511 - B2_Mm2 SINE B2 -3 192 3 9 847 1646 252 98 54 chr15 34426463 34426764 -69068210 - RCHARR1 DNA MER1_type -592 382 1 9 847 455 246 36 71 chr15 34428215 34428355 -69066619 - B1F SINE Alu -6 143 9 9 847 34 24 0 0 chr15 34428450 34428491 -69066483 + AT_rich Low_complexity Low_complexity 1 41 0 9 847 472 304 67 0 chr15 34428523 34428658 -69066316 - RSINE1 SINE B4 -19 146 3 9 847 422 242 99 23 chr15 34428676 34428807 -69066167 - ID_B1 SINE B4 0 224 84 9 847 186 43 0 0 chr15 34428810 34428833 -69066141 + (T)n Simple_repeat Simple_repeat 1 23 0 9 847 1087 90 14 0 chr15 34428833 34428977 -69065997 - B1_Mm SINE Alu 0 147 2 9 847 398 189 105 0 chr15 34429571 34429666 -69065308 + RSINE1 SINE B4 17 121 -44 9 847 198 0 0 0 chr15 34429728 34429750 -69065224 + (TG)n Simple_repeat Simple_repeat 1 22 0 9 847 306 67 0 0 chr15 34429750 34429795 -69065179 + (GA)n Simple_repeat Simple_repeat 2 46 0 9 847 224 292 27 14 chr15 34431815 34431888 -69063086 + RSINE1 SINE B4 3 76 -89 9 847 299 65 22 0 chr15 34431895 34431941 -69063033 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 847 378 0 0 0 chr15 34432662 34432704 -69062270 + (GA)n Simple_repeat Simple_repeat 1 42 0 9 847 3012 63 7 20 chr15 34432790 34433193 -69061781 - MTB LTR MaLR -2 398 1 9 847 22 35 0 0 chr15 34433230 34433259 -69061715 + AT_rich Low_complexity Low_complexity 1 29 0 9 847 727 312 53 8 chr15 34433282 34433544 -69061430 + B4A SINE B4 1 274 -18 9 847 641 200 144 28 chr15 34433592 34433772 -69061202 + B3 SINE B2 3 203 -13 9 847 451 130 250 0 chr15 34433943 34434035 -69060939 + B1_Mus2 SINE Alu 28 142 -5 9 847 1155 134 37 5 chr15 34434045 34434233 -69060741 + B2_Mm2 SINE B2 2 195 0 9 847 265 160 307 0 chr15 34434263 34434338 -69060636 + PB1D7 SINE Alu 10 107 -13 9 847 282 141 0 0 chr15 34435100 34435149 -69059825 + PB1D9 SINE Alu 22 70 -77 9 847 483 62 38 0 chr15 34435158 34435238 -69059736 + (TTCTC)n Simple_repeat Simple_repeat 4 86 0 9 847 863 88 20 13 chr15 34435312 34435461 -69059513 + (TTCTC)n Simple_repeat Simple_repeat 4 153 0 9 847 569 126 186 40 chr15 34435552 34435676 -69059298 - B1_Mus2 SINE Alu 0 147 6 9 847 428 230 30 0 chr15 34435793 34435893 -69059081 - B3 SINE B2 -113 103 1 9 847 231 291 91 23 chr15 34436672 34436760 -69058214 - MIR SINE MIR -54 208 115 9 847 644 185 0 16 chr15 34437650 34437771 -69057203 - B3A SINE B2 -73 125 7 9 847 190 213 21 0 chr15 34438206 34438253 -69056721 - L2b LINE L2 -2 3373 3326 9 847 585 102 46 23 chr15 34438799 34438929 -69056045 + CT-rich Low_complexity Low_complexity 2 134 0 9 847 834 62 0 0 chr15 34438967 34439080 -69055894 + (TC)n Simple_repeat Simple_repeat 1 113 0 9 847 398 202 90 0 chr15 34439081 34439170 -69055804 - B1_Mur2 SINE Alu -15 134 38 9 847 32 0 0 0 chr15 34439195 34439227 -69055747 + AT_rich Low_complexity Low_complexity 1 32 0 9 847 266 324 64 14 chr15 34439827 34439843 -69055131 - B4A SINE B4 -59 233 218 9 847 216 0 0 0 chr15 34439843 34439867 -69055107 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 847 368 258 36 23 chr15 34439867 34439881 -69055093 - ID_B1 SINE B4 -75 217 148 9 847 636 119 36 9 chr15 34439881 34439991 -69054983 - B1_Mus1 SINE Alu -35 113 1 9 847 341 226 39 102 chr15 34439991 34440019 -69054955 - MT2B LTR ERVL -443 158 139 9 847 368 258 36 23 chr15 34439991 34440004 -69054970 - ID_B1 SINE B4 -75 147 69 9 847 209 258 29 12 chr15 34440939 34441045 -69053929 + L2a LINE L2 3237 3391 -35 9 847 225 139 23 56 chr15 34441008 34441069 -69053905 + MIRm SINE MIR 206 254 -8 9 847 490 216 88 0 chr15 34442327 34442429 -69052545 - RSINE1 SINE B4 -54 111 1 9 847 243 253 30 15 chr15 34443910 34443998 -69050976 + ID4 SINE ID 3 88 -64 9 847 419 216 66 15 chr15 34444111 34444247 -69050727 - L1MC2 LINE L1 -362 5982 5840 9 847 1246 42 162 0 chr15 34444760 34444927 -69050047 - B2_Mm2 SINE B2 0 195 2 9 847 866 65 161 0 chr15 34444968 34445092 -69049882 - B1_Mus2 SINE Alu -2 145 2 9 847 30 0 0 0 chr15 34445144 34445174 -69049800 + AT_rich Low_complexity Low_complexity 1 30 0 1 847 278 286 39 0 chr15 34446637 34446714 -69048260 + L2a LINE L2 3346 3425 -1 1 847 598 242 65 7 chr15 34447979 34448133 -69046841 + RSINE1 SINE B4 3 165 0 1 847 1032 65 59 0 chr15 34448497 34448650 -69046324 - B2_Mm2 SINE B2 -7 188 27 1 847 31508 96 19 9 chr15 34448656 34454837 -69040137 - L1_Mus3 LINE L1 -3 6635 391 1 847 1247 28 0 0 chr15 34454845 34454986 -69039988 - B1_Mm SINE Alu -6 141 1 1 847 286 77 0 0 chr15 34454987 34455026 -69039948 - B2_Mm2 SINE B2 -155 40 2 1 847 295 269 13 0 chr15 34455390 34455468 -69039506 - ID4_ SINE ID 0 83 5 1 847 408 143 0 0 chr15 34456787 34456871 -69038103 + (TG)n Simple_repeat Simple_repeat 2 85 0 1 847 538 337 80 3 chr15 34457192 34457481 -69037493 - MER58B DNA MER1_type -5 336 26 1 847 452 288 110 79 chr15 34457723 34458051 -69036923 - Lx8 LINE L1 0 7473 7136 1 847 580 122 278 0 chr15 34458058 34458173 -69036801 - B1_Mus1 SINE Alu -1 147 1 1 847 363 241 241 0 chr15 34458301 34458442 -69036532 - Lx8 LINE L1 -467 7006 6832 1 847 288 193 0 0 chr15 34458446 34458503 -69036471 + B1_Mus2 SINE Alu 2 58 -89 1 847 419 0 20 0 chr15 34458509 34458560 -69036414 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 847 204 231 0 0 chr15 34459911 34459950 -69035024 + GA-rich Low_complexity Low_complexity 1 39 0 1 847 2453 45 3 0 chr15 34460841 34461133 -69033841 - L1_Mus1 LINE L1 0 6567 6275 1 847 817 50 0 0 chr15 34461133 34461232 -69033742 + L1_Mus1 LINE L1 6155 6253 -313 1 847 460 143 32 21 chr15 34461468 34461561 -69033413 + U6 snRNA snRNA 1 94 -13 1 847 962 131 61 22 chr15 34461756 34461936 -69033038 + B2_Mm2 SINE B2 2 188 -7 1 847 418 201 103 76 chr15 34463012 34463157 -69031817 - B1_Mur2 SINE Alu 0 149 1 1 847 1017 260 60 78 chr15 34463208 34463542 -69031432 + MTE2b LTR MaLR 51 378 -1 1 847 250 280 0 13 chr15 34463931 34464007 -69030967 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 847 465 19 0 0 chr15 34464066 34464120 -69030854 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 847 623 75 0 0 chr15 34464655 34464748 -69030226 - L1_Mus3 LINE L1 0 6638 6546 1 847 310 303 37 0 chr15 34465407 34465516 -69029458 + PB1D9 SINE Alu 8 120 0 1 847 270 0 0 0 chr15 34465974 34466004 -69028970 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 847 839 292 46 8 chr15 34466034 34466296 -69028678 - B4A SINE B4 -18 274 3 1 847 330 211 0 0 chr15 34466308 34466412 -69028562 + (TG)n Simple_repeat Simple_repeat 2 105 0 1 847 373 276 127 7 chr15 34466415 34466557 -69028417 - RSINE1 SINE B4 -4 161 3 1 847 203 133 22 0 chr15 34467031 34467076 -69027898 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 847 194 185 227 15 chr15 34467464 34467530 -69027444 + MER5A DNA MER1_type 16 95 -94 1 847 207 309 52 52 chr15 34467656 34467772 -69027202 + MER5A DNA MER1_type 47 162 -27 1 847 240 35 0 0 chr15 34467883 34467912 -69027062 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 847 216 245 109 30 chr15 34470294 34470395 -69024579 + MIRm SINE MIR 46 154 -122 1 847 287 278 52 120 chr15 34470468 34470660 -69024314 - MIRb SINE MIR -15 253 75 1 105 493 334 28 96 chr15 34471840 34472194 -69022780 - MLT1A LTR MaLR -9 365 36 1 848 195 129 0 0 chr15 34472230 34472261 -69022713 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 848 307 282 0 23 chr15 34472378 34472465 -69022509 + MLT1F1 LTR MaLR 275 359 -189 1 848 317 218 66 44 chr15 34472472 34472563 -69022411 - B4 SINE B4 -3 289 197 1 848 24 32 0 0 chr15 34472657 34472688 -69022286 + AT_rich Low_complexity Low_complexity 1 31 0 1 848 289 356 20 20 chr15 34472866 34473015 -69021959 - MIR SINE MIR -44 218 70 1 848 216 0 0 0 chr15 34473024 34473048 -69021926 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 848 271 0 0 0 chr15 34473048 34473078 -69021896 - L1_Mm LINE L1 -1518 4365 4336 1 848 2770 73 14 3 chr15 34473078 34473449 -69021525 - L1Md_F2 LINE L1 0 6582 6208 1 848 285 215 74 25 chr15 34473693 34473774 -69021200 - RMER10A LTR ERVL -37 405 321 1 848 510 57 0 0 chr15 34473829 34473899 -69021075 + (GA)n Simple_repeat Simple_repeat 2 71 0 1 848 403 231 75 87 chr15 34473936 34474097 -69020877 - RMER10A LTR ERVL -265 177 19 1 848 217 264 0 0 chr15 34474291 34474344 -69020630 - B4 SINE B4 -238 54 2 1 848 348 311 77 26 chr15 34474344 34474531 -69020443 + MLT1F1 LTR MaLR 373 569 0 1 848 288 0 0 0 chr15 34474832 34474864 -69020110 + (T)n Simple_repeat Simple_repeat 1 32 0 1 848 950 176 14 47 chr15 34474943 34475157 -69019817 - B3 SINE B2 0 216 10 1 848 10835 95 15 3 chr15 34475321 34477619 -69017355 - L1_Mus3 LINE L1 0 6638 4315 1 848 189 195 0 0 chr15 34477638 34477679 -69017295 + CT-rich Low_complexity Low_complexity 2 42 0 1 848 269 260 148 20 chr15 34477697 34477846 -69017128 - L2a LINE L2 -34 3392 3225 1 848 348 24 0 0 chr15 34479525 34479566 -69015408 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 848 262 278 44 53 chr15 34479697 34479811 -69015163 + MIRm SINE MIR 78 190 -86 1 848 1333 63 23 6 chr15 34480358 34480533 -69014441 - B2_Mm1t SINE B2 -14 179 2 1 848 723 264 28 5 chr15 34480610 34480823 -69014151 + Tigger1 DNA MER2_type 205 422 -1996 1 848 1326 253 256 24 chr15 34480860 34481525 -69013449 + Tigger1 DNA MER2_type 506 1324 -1094 1 848 4672 159 39 14 chr15 34481528 34482121 -69012853 + L1Md_T LINE L1 448 1068 -5566 1 848 2669 40 9 6 chr15 34482121 34482447 -69012527 - IAPLTR2b LTR ERVK 0 327 1 1 848 24067 112 111 8 chr15 34482447 34486549 -69008425 + L1Md_T LINE L1 1069 5586 -297 1 848 8307 50 0 0 chr15 34486549 34487545 -69007429 + L1Md_T LINE L1 5587 6582 0 1 848 14435 128 12 16 chr15 34487545 34491087 -69003887 + Lx2 LINE L1 3465 6997 0 1 848 508 239 184 5 chr15 34491139 34491324 -69003650 + Tigger1 DNA MER2_type 1373 1590 -828 1 848 713 288 37 14 chr15 34491327 34491545 -69003429 + B4A SINE B4 68 290 -2 1 848 1214 277 32 144 chr15 34491606 34492344 -69002630 + Tigger1 DNA MER2_type 1577 2232 -186 1 848 725 232 53 53 chr15 34492350 34492559 -69002415 - B3A SINE B2 0 216 8 1 848 2196 65 1 3 chr15 34493270 34493557 -69001417 + L1Md_F2 LINE L1 5331 5615 -688 1 848 8111 39 12 9 chr15 34493557 34494550 -69000424 + L1Md_F2 LINE L1 5587 6582 0 1 848 453 279 181 40 chr15 34494562 34494887 -69000087 - MLT1C LTR MaLR -52 415 45 1 848 328 345 18 0 chr15 34496320 34496485 -68998489 - HAL1-2a_MD LINE L1 -531 2493 2326 1 848 1454 164 89 10 chr15 34497029 34497331 -68997643 - RLTR9D LTR ERVK -3 400 75 1 848 3460 84 55 6 chr15 34497331 34497883 -68997091 - RLTR13D1 LTR ERVK 0 929 227 1 848 2870 149 34 24 chr15 34497856 34498394 -68996580 - RLTR13D1 LTR ERVK -359 543 1 1 848 653 25 0 0 chr15 34498394 34498474 -68996500 - RLTR9D LTR ERVK -323 80 1 1 848 290 331 41 8 chr15 34498745 34498867 -68996107 + MTEb LTR MaLR 251 376 -3 1 848 325 225 57 21 chr15 34498884 34499049 -68995925 - B4A SINE B4 -2 290 8 1 848 242 302 53 23 chr15 34499271 34499403 -68995571 - MLT1C LTR MaLR 0 467 332 1 848 410 282 158 32 chr15 34499603 34499849 -68995125 + B4A SINE B4 2 278 -14 1 848 479 128 0 60 chr15 34500002 34500085 -68994889 - B2_Mm2 SINE B2 -88 107 30 1 848 1044 124 171 5 chr15 34500091 34500278 -68994696 - MTC LTR MaLR 0 421 204 2 848 1236 96 0 0 chr15 34500297 34500474 -68994500 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 3 848 496 238 50 0 chr15 34500476 34500577 -68994397 - B1_Mur3 SINE Alu -42 107 2 4 848 801 195 91 11 chr15 34500577 34500756 -68994218 - MTC LTR MaLR -216 205 12 2 848 454 242 12 29 chr15 34500824 34500956 -68994018 + L1MC1 LINE L1 6190 6320 -24 5 848 356 235 59 22 chr15 34501957 34502092 -68992882 + L1MC2 LINE L1 5827 5966 -378 6 848 531 275 0 40 chr15 34503047 34503195 -68991779 + MER58B DNA MER1_type 200 341 0 7 848 691 115 0 0 chr15 34503998 34504094 -68990880 + RLTR26 LTR ERVK 547 642 0 8 848 21 0 0 0 chr15 34504273 34504294 -68990680 + GC_rich Low_complexity Low_complexity 1 21 0 9 848 3582 169 22 2 chr15 34506488 34507073 -68987901 - Lx LINE L1 -5 6649 6053 1 848 754 204 95 7 chr15 34507126 34507274 -68987700 - RSINE1 SINE B4 -2 163 3 1 848 424 250 127 26 chr15 34508847 34509018 -68985956 - B4 SINE B4 -12 280 5 1 848 863 264 150 109 chr15 34509955 34510502 -68984472 - L1MB3 LINE L1 -80 6091 5473 1 848 722 244 158 6 chr15 34510502 34510679 -68984295 + B3 SINE B2 2 205 -11 1 848 574 189 0 249 chr15 34510685 34510882 -68984092 + B1_Mur1 SINE Alu 2 149 0 1 848 863 262 141 127 chr15 34510882 34511113 -68983861 - L1MB3 LINE L1 -711 5472 5278 1 848 24 0 0 0 chr15 34511477 34511501 -68983473 + AT_rich Low_complexity Low_complexity 1 24 0 1 848 324 178 1 0 chr15 34511743 34511824 -68983150 + B1F2 SINE Alu 2 84 -63 1 848 300 317 180 28 chr15 34512096 34512346 -68982628 + L3 LINE CR1 4091 4378 -111 1 848 236 300 68 29 chr15 34512734 34512837 -68982137 + ORR1A3-int LTR MaLR 1386 1492 -471 1 848 476 82 27 0 chr15 34513261 34513334 -68981640 + (CGTG)n Simple_repeat Simple_repeat 1 75 0 2 848 402 21 0 0 chr15 34514645 34514692 -68980282 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 848 865 202 188 33 chr15 34515303 34515548 -68979426 + B4A SINE B4 2 284 -8 2 848 492 184 0 0 chr15 34516192 34516290 -68978684 + GA-rich Low_complexity Low_complexity 2 99 0 2 848 28 0 0 0 chr15 34516602 34516630 -68978344 + AT_rich Low_complexity Low_complexity 1 28 0 2 848 357 309 93 30 chr15 34516781 34517018 -68977956 - L1ME4a LINE L1 -191 5933 5682 2 848 834 199 72 6 chr15 34517755 34517922 -68977052 + Lx7 LINE L1 6114 6291 -1405 2 848 4212 201 55 14 chr15 34517926 34518778 -68976196 + Lx6 LINE L1 6562 7448 -12 2 848 246 81 0 0 chr15 34518781 34518818 -68976156 + (TCTCTG)n Simple_repeat Simple_repeat 6 42 0 2 848 199 173 19 19 chr15 34518893 34518946 -68976028 + CT-rich Low_complexity Low_complexity 4 56 0 2 848 404 271 77 8 chr15 34518952 34519082 -68975892 - ID_B1 SINE B4 0 224 86 3 848 854 206 151 5 chr15 34519123 34519308 -68975666 - B3 SINE B2 -3 213 2 3 848 631 302 88 11 chr15 34519622 34519906 -68975068 - L1MA9 LINE L1 0 6312 6007 3 848 716 243 81 0 chr15 34520118 34520266 -68974708 - RSINE1 SINE B4 -4 161 2 3 848 204 40 0 0 chr15 34520595 34520620 -68974354 + (TA)n Simple_repeat Simple_repeat 1 25 0 3 848 33146 101 6 11 chr15 34521463 34527502 -68967472 - L1_Mus2 LINE L1 0 6566 556 3 848 324 228 0 12 chr15 34527519 34527599 -68967375 - L1VL2 LINE L1 -6150 185 107 3 848 4880 41 25 3 chr15 34527600 34528165 -68966809 + L1Md_F2 LINE L1 5994 6570 -12 3 848 939 208 0 0 chr15 34528312 34528461 -68966513 - B1_Mur2 SINE Alu 0 149 1 3 848 21 36 0 0 chr15 34529867 34529895 -68965079 + AT_rich Low_complexity Low_complexity 1 28 0 3 848 717 97 0 0 chr15 34530279 34530382 -68964592 + (TTTCC)n Simple_repeat Simple_repeat 4 106 0 4 848 489 34 0 0 chr15 34530383 34530442 -68964532 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 4 848 1031 90 0 0 chr15 34530443 34530577 -68964397 - B1_Mus2 SINE Alu -12 135 2 4 848 1730 180 135 6 chr15 34530615 34530962 -68964012 + ORR1B1 LTR MaLR 1 392 -2 4 848 201 39 0 0 chr15 34531056 34531082 -68963892 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 848 916 163 19 82 chr15 34531445 34531602 -68963372 + B2_Mm2 SINE B2 1 159 -36 4 848 1126 90 12 12 chr15 34531602 34531770 -68963204 + L1_Mus3 LINE L1 6469 6636 -2 4 848 916 163 19 82 chr15 34531770 34531819 -68963155 + B2_Mm2 SINE B2 160 194 -1 4 848 249 245 0 0 chr15 34532300 34532349 -68962625 - MIR SINE MIR -97 165 117 4 848 242 328 29 36 chr15 34532403 34532542 -68962432 + MLT1E2 LTR MaLR 17 154 -473 4 848 230 219 15 30 chr15 34532640 34532706 -68962268 + MLT1E2 LTR MaLR 326 390 0 4 848 233 239 44 15 chr15 34532774 34532842 -68962132 + CT-rich Low_complexity Low_complexity 1 70 0 4 848 793 148 14 43 chr15 34532847 34532988 -68961986 - B1_Mur1 SINE Alu -1 148 12 5 848 437 268 81 97 chr15 34532988 34533029 -68961945 - B4 SINE B4 -64 224 46 5 848 317 251 14 0 chr15 34533134 34533308 -68961666 + (TG)n Simple_repeat Simple_repeat 1 176 0 5 848 855 216 33 22 chr15 34533320 34533500 -68961474 - B3A SINE B2 -16 182 1 5 848 340 357 19 13 chr15 34533646 34533805 -68961169 + MIR SINE MIR 31 190 -72 5 848 386 286 19 0 chr15 34534915 34535020 -68959954 - PB1D10 SINE Alu -10 107 1 5 848 926 235 113 42 chr15 34537156 34537494 -68957480 + MTD LTR MaLR 26 415 -4 5 848 231 236 13 53 chr15 34537671 34537747 -68957227 + CT-rich Low_complexity Low_complexity 4 76 0 5 848 1152 80 0 0 chr15 34537992 34538130 -68956844 + B1_Mus1 SINE Alu 1 138 -10 5 848 423 0 0 0 chr15 34538130 34538177 -68956797 + (CAA)n Simple_repeat Simple_repeat 2 48 0 5 848 239 220 17 17 chr15 34538627 34538687 -68956287 + CT-rich Low_complexity Low_complexity 5 64 0 6 848 456 278 130 0 chr15 34539120 34539235 -68955739 - B1F1 SINE Alu -10 139 10 6 848 1275 89 0 0 chr15 34540038 34540217 -68954757 + (TTC)n Simple_repeat Simple_repeat 2 180 0 6 848 21 0 0 0 chr15 34540528 34540549 -68954425 + AT_rich Low_complexity Low_complexity 1 21 0 6 848 578 171 60 0 chr15 34541222 34541339 -68953635 + RLTR15 LTR ERVK 236 359 0 6 848 958 318 25 13 chr15 34541339 34541734 -68953240 - L1_Mur3 LINE L1 -1730 4150 3751 6 848 1629 73 7 12 chr15 34542164 34542383 -68952591 - L1Md_F2 LINE L1 -335 5965 5709 6 848 5411 53 22 22 chr15 34542383 34543054 -68951920 + L1Md_F2 LINE L1 5910 6580 -2 6 848 214 50 24 24 chr15 34544113 34544154 -68950820 + (CAAAC)n Simple_repeat Simple_repeat 2 42 0 6 848 561 68 0 0 chr15 34544206 34544280 -68950694 + (TC)n Simple_repeat Simple_repeat 2 75 0 6 848 273 342 12 12 chr15 34544608 34544688 -68950286 + B3A SINE B2 1 80 -118 6 848 293 312 79 14 chr15 34544852 34544992 -68949982 + MER103 DNA DNA 11 159 -7 7 848 879 116 0 55 chr15 34545908 34545987 -68948987 + polypyrimidine Low_complexity Low_complexity 94 172 0 7 848 2907 58 14 3 chr15 34545987 34546350 -68948624 - L1_Mus3 LINE L1 -4 6634 6268 7 848 879 116 0 55 chr15 34546350 34546452 -68948522 + polypyrimidine Low_complexity Low_complexity 1 93 0 7 848 28 29 0 0 chr15 34546463 34546498 -68948476 + AT_rich Low_complexity Low_complexity 1 35 0 7 848 281 220 17 0 chr15 34547276 34547335 -68947639 - MIR SINE MIR 0 262 203 7 848 218 284 93 86 chr15 34547366 34547505 -68947469 - MIR3 SINE MIR -67 141 2 7 848 394 256 68 0 chr15 34547505 34547567 -68947407 + MIRb SINE MIR 82 151 -117 7 848 26076 154 24 5 chr15 34547780 34551162 -68943812 - Lx LINE L1 -1 6653 3174 7 848 281 47 23 0 chr15 34551162 34551205 -68943769 + (CAAAA)n Simple_repeat Simple_repeat 4 47 0 7 848 26076 139 17 5 chr15 34551205 34553489 -68941485 - Lx LINE L1 -2710 3173 882 7 848 1815 228 41 5 chr15 34553475 34553519 -68941455 - Lx9 LINE L1 -120 7524 7481 8 848 351 0 0 0 chr15 34553519 34553558 -68941416 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 8 848 1121 82 0 0 chr15 34553559 34553694 -68941280 - B1_Mus2 SINE Alu -12 135 1 8 848 1815 228 41 5 chr15 34553694 34554066 -68940908 - Lx9 LINE L1 -164 7480 7093 8 848 572 270 118 15 chr15 34554068 34554271 -68940703 - B4A SINE B4 -66 226 3 8 848 201 226 0 0 chr15 34554899 34554952 -68940022 + GA-rich Low_complexity Low_complexity 2 54 0 8 848 24 0 0 0 chr15 34555850 34555874 -68939100 + AT_rich Low_complexity Low_complexity 1 24 0 8 848 232 213 52 26 chr15 34556023 34556100 -68938874 - L1M5 LINE L1 -274 5850 5772 8 848 8332 83 4 1 chr15 34556395 34557973 -68937001 - L1_Mus3 LINE L1 0 6638 5056 8 848 24 53 0 0 chr15 34558865 34558903 -68936071 + AT_rich Low_complexity Low_complexity 1 38 0 8 848 216 0 0 0 chr15 34558903 34558927 -68936047 + (TG)n Simple_repeat Simple_repeat 1 24 0 8 848 388 212 173 0 chr15 34558933 34559059 -68935915 - B3A SINE B2 -36 162 2 9 848 622 240 97 66 chr15 34559059 34559253 -68935721 - B4A SINE B4 -68 224 25 9 848 25 51 0 0 chr15 34559253 34559292 -68935682 + AT_rich Low_complexity Low_complexity 1 39 0 9 848 34 65 0 0 chr15 34561791 34561853 -68933121 + AT_rich Low_complexity Low_complexity 1 62 0 9 848 546 257 59 138 chr15 34561855 34562058 -68932916 - B3A SINE B2 0 195 9 9 848 403 232 272 9 chr15 34562240 34562453 -68932521 + L1MA6 LINE L1 6028 6296 -4 9 848 22 0 0 0 chr15 34562454 34562476 -68932498 + AT_rich Low_complexity Low_complexity 1 22 0 9 848 306 0 0 0 chr15 34562791 34562825 -68932149 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 848 300 53 0 0 chr15 34562826 34562864 -68932110 + (GA)n Simple_repeat Simple_repeat 1 38 0 9 848 180 0 0 0 chr15 34562862 34562882 -68932092 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 9 848 8600 72 3 3 chr15 34563044 34564067 -68930907 + RLTR13D5 LTR ERVK 1 1023 0 1 848 273 287 23 0 chr15 34564187 34564274 -68930700 + GA-rich Low_complexity Low_complexity 1 89 0 1 848 357 262 12 0 chr15 34564366 34564450 -68930524 + B3 SINE B2 132 216 0 1 848 219 173 0 0 chr15 34564793 34564845 -68930129 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 848 608 257 44 92 chr15 34567562 34567658 -68927316 + B3A SINE B2 3 88 -110 1 848 270 0 0 0 chr15 34567658 34567688 -68927286 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 848 608 257 44 92 chr15 34567688 34567797 -68927177 + B3A SINE B2 89 198 0 1 848 541 224 25 180 chr15 34567982 34568157 -68926817 - Lx8 LINE L1 -311 7162 7025 1 848 1242 36 0 0 chr15 34568157 34568295 -68926679 - B1_Mus2 SINE Alu -9 138 1 1 848 541 224 25 180 chr15 34568295 34568358 -68926616 - Lx8 LINE L1 -449 7024 6961 1 848 599 243 14 14 chr15 34568362 34568504 -68926470 - B1F1 SINE Alu -1 148 7 1 848 256 301 41 141 chr15 34568504 34568528 -68926446 - B4 SINE B4 -65 223 75 1 848 223 379 19 13 chr15 34568892 34569047 -68925927 - MIR SINE MIR -91 171 16 1 848 208 214 0 0 chr15 34569293 34569335 -68925639 + (TGG)n Simple_repeat Simple_repeat 1 42 0 1 848 255 264 0 0 chr15 34569593 34569646 -68925328 - RSINE1 SINE B4 -29 136 84 1 848 282 56 0 0 chr15 34569676 34569712 -68925262 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 848 211 189 13 51 chr15 34569750 34569828 -68925146 + (TATAA)n Simple_repeat Simple_repeat 4 78 0 1 848 15976 90 15 3 chr15 34570041 34572929 -68922045 + L1VL4 LINE L1 7 2824 -735 1 848 333 0 0 0 chr15 34572929 34572966 -68922008 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 1 848 15976 75 17 3 chr15 34572966 34573247 -68921727 + L1VL4 LINE L1 2825 3126 -433 1 848 7205 85 10 7 chr15 34573246 34574616 -68920358 + L1_Mus1 LINE L1 5192 6567 0 1 848 9129 142 20 3 chr15 34574624 34576096 -68918878 + L1_Mur2 LINE L1 3461 4957 -920 1 848 2861 51 30 3 chr15 34576581 34576918 -68918056 + ORR1A1 LTR MaLR 1 346 0 1 848 946 274 28 31 chr15 34576977 34577267 -68917707 - B4A SINE B4 -2 290 2 1 848 225 190 62 12 chr15 34577322 34577402 -68917572 + (CTATA)n Simple_repeat Simple_repeat 2 85 0 1 848 990 137 20 14 chr15 34578001 34578149 -68916825 + B1_Mur4 SINE Alu 2 150 0 1 848 843 165 23 0 chr15 34578664 34578797 -68916177 - B1_Mur1 SINE Alu -9 140 5 1 848 349 276 0 0 chr15 34579262 34579338 -68915636 + ID4_ SINE ID 8 83 0 1 848 285 299 13 0 chr15 34579502 34579579 -68915395 + ID4 SINE ID 3 80 -3 1 848 25 65 0 0 chr15 34579663 34579709 -68915265 + AT_rich Low_complexity Low_complexity 1 46 0 1 848 24 0 0 0 chr15 34579999 34580023 -68914951 + AT_rich Low_complexity Low_complexity 1 24 0 1 848 439 263 56 25 chr15 34580350 34580489 -68914485 + RSINE1 SINE B4 1 144 -21 1 848 369 0 0 0 chr15 34580489 34580530 -68914444 + (TATG)n Simple_repeat Simple_repeat 3 43 0 1 848 439 263 56 25 chr15 34580530 34580550 -68914424 + RSINE1 SINE B4 145 164 -1 1 848 768 238 77 47 chr15 34581584 34581814 -68913160 + B4A SINE B4 2 238 -54 1 848 539 315 115 67 chr15 34581814 34582083 -68912891 + B4A SINE B4 1 282 -10 1 848 260 286 0 0 chr15 34582629 34582706 -68912268 + L1MB5 LINE L1 5080 5156 -990 1 848 360 0 0 0 chr15 34582713 34582753 -68912221 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 848 414 244 51 35 chr15 34582803 34582968 -68912006 + L1MB5 LINE L1 5157 5317 -829 1 848 955 281 168 17 chr15 34582981 34583636 -68911338 + L1MB5 LINE L1 5413 6166 -12 1 848 423 273 7 104 chr15 34583752 34583887 -68911087 - RSINE1 SINE B4 -36 129 8 1 848 625 185 53 23 chr15 34584246 34584379 -68910595 - RMER1C Other Other -2 1340 1204 1 848 986 158 8 0 chr15 34584379 34584614 -68910360 + GA-rich Low_complexity Low_complexity 1 236 0 1 848 911 169 87 0 chr15 34584673 34584857 -68910117 - RMER1C Other Other -153 1189 990 1 848 341 293 154 50 chr15 34585005 34585264 -68909710 - L1M4 LINE L1 -3540 2606 2321 1 848 230 269 53 150 chr15 34585469 34585696 -68909278 - RLTR12B LTR ERVK -296 232 28 1 848 667 229 82 17 chr15 34585763 34585994 -68908980 - L1MA8 LINE L1 -22 6269 6024 1 848 741 239 146 5 chr15 34586056 34586241 -68908733 - ID_B1 SINE B4 -5 219 9 1 848 1302 262 72 101 chr15 34586274 34586969 -68908005 - L1MD2 LINE L1 -6 6236 5562 1 848 520 304 43 10 chr15 34587180 34587389 -68907585 - L1MC1 LINE L1 -1 6332 6117 1 848 207 0 0 0 chr15 34587605 34587628 -68907346 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 848 1220 258 65 16 chr15 34588029 34588352 -68906622 + MTE-int LTR MaLR 1239 1577 -3 1 848 865 223 64 21 chr15 34588406 34588594 -68906380 + B3 SINE B2 1 196 -20 1 848 533 15 15 0 chr15 34588597 34588663 -68906311 + (GGAA)n Simple_repeat Simple_repeat 4 70 0 1 848 366 313 27 109 chr15 34588681 34588761 -68906213 + MTEb LTR MaLR 50 127 -252 1 848 1944 151 126 6 chr15 34588761 34589087 -68905887 - ORR1B2 LTR MaLR 0 367 3 1 848 480 243 53 169 chr15 34589087 34589362 -68905612 + MTEb LTR MaLR 128 366 -13 1 848 323 250 49 24 chr15 34589362 34589444 -68905530 - MER2 DNA MER2_type -1 344 261 1 848 3609 53 0 2 chr15 34589455 34589870 -68905104 - L1_Mus1 LINE L1 -14 6553 6140 1 848 357 233 47 0 chr15 34590253 34590339 -68904635 + RMER15 LTR ERVL 473 562 -13 1 848 537 297 69 0 chr15 34590341 34590516 -68904458 - MER2 DNA MER2_type -154 191 5 1 848 401 211 89 8 chr15 34590514 34590638 -68904336 - Tigger7 DNA MER2_type -90 2401 2268 1 848 1487 257 47 13 chr15 34590689 34591154 -68903820 - L1MC1 LINE L1 -335 5998 5518 1 848 425 268 57 14 chr15 34591258 34591398 -68903576 - L1MB7 LINE L1 -106 6078 5933 1 848 864 123 8 8 chr15 34591447 34591578 -68903396 - RLTR25B LTR ERVK 0 1103 973 1 848 4480 136 52 33 chr15 34591552 34592363 -68902611 - RLTR25B LTR ERVK -202 826 1 1 848 750 230 34 0 chr15 34592363 34592541 -68902433 - L1MB7 LINE L1 -286 5898 5715 1 848 393 224 73 22 chr15 34592829 34592966 -68902008 - L1MEd LINE L1 -4974 1145 1002 1 848 216 0 0 0 chr15 34593012 34593036 -68901938 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 848 24 0 0 0 chr15 34593210 34593234 -68901740 + AT_rich Low_complexity Low_complexity 1 24 0 1 848 308 220 145 3 chr15 34593313 34593419 -68901555 - MTEa LTR MaLR 0 359 256 1 848 246 305 64 99 chr15 34593627 34593860 -68901114 + ORR1D1 LTR MaLR 8 232 -142 1 848 198 0 0 0 chr15 34594000 34594022 -68900952 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1 848 1275 51 0 31 chr15 34594763 34594924 -68900050 + L1_Mus1 LINE L1 6408 6563 -4 1 848 212 239 55 27 chr15 34595166 34595239 -68899735 + L2 LINE L2 2583 2657 -762 1 848 584 278 57 142 chr15 34596186 34596625 -68898349 - MLT1D LTR MaLR -41 426 6 1 848 2194 256 40 3 chr15 34598948 34599571 -68895403 - L1MA7 LINE L1 -43 6248 5603 1 848 279 318 116 0 chr15 34600281 34600410 -68894564 - MIR SINE MIR -16 246 103 1 848 200 111 0 62 chr15 34600587 34600635 -68894339 + A-rich Low_complexity Low_complexity 1 45 0 1 848 414 0 0 0 chr15 34600642 34600688 -68894286 + (CCA)n Simple_repeat Simple_repeat 1 46 0 1 848 192 152 0 0 chr15 34601041 34601074 -68893900 + T-rich Low_complexity Low_complexity 1 33 0 1 848 226 302 133 16 chr15 34601526 34601654 -68893320 + MIRb SINE MIR 82 224 -44 1 848 3570 57 0 11 chr15 34601928 34602371 -68892603 - L1Md_F2 LINE L1 -1 6581 6144 1 848 1447 6 0 0 chr15 34602372 34602531 -68892443 + L1Md_F2 LINE L1 5650 5808 -774 1 848 191 309 18 18 chr15 34602608 34602664 -68892310 - MIR SINE MIR -78 130 75 1 848 428 314 81 6 chr15 34602861 34602872 -68892102 - B4A SINE B4 0 292 282 1 848 252 59 0 0 chr15 34602872 34602906 -68892068 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 13 428 314 81 6 chr15 34602906 34603067 -68891907 - B4A SINE B4 -11 281 107 1 849 207 0 0 0 chr15 34603484 34603507 -68891467 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 849 279 0 0 0 chr15 34603507 34603537 -68891437 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 849 842 239 18 67 chr15 34603628 34603852 -68891122 - B3 SINE B2 -3 213 1 1 849 3425 230 90 54 chr15 34604067 34604221 -68890753 - RMER1B Other Other -3 1063 934 1 849 297 0 0 0 chr15 34604221 34604254 -68890720 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 849 3425 230 90 54 chr15 34604254 34604313 -68890661 - RMER1B Other Other -133 933 872 1 849 1987 119 108 0 chr15 34604313 34604608 -68890366 + ORR1A4 LTR MaLR 3 329 0 1 849 3425 230 90 54 chr15 34604608 34605412 -68889562 - RMER1B Other Other -195 871 8 1 849 305 307 112 42 chr15 34609189 34609332 -68885642 + HAL1-3A_ME LINE L1 2287 2439 -419 1 849 315 0 0 0 chr15 34609413 34609448 -68885526 + (A)n Simple_repeat Simple_repeat 1 35 0 1 849 248 304 14 0 chr15 34609618 34609687 -68885287 - ID4 SINE ID -6 77 8 1 849 342 123 0 0 chr15 34610683 34610740 -68884234 + (TTA)n Simple_repeat Simple_repeat 1 57 0 1 849 259 311 64 36 chr15 34610880 34610990 -68883984 + MIR SINE MIR 40 152 -110 1 849 1079 218 23 23 chr15 34610990 34611206 -68883768 + B3 SINE B2 1 216 0 1 849 881 153 51 45 chr15 34611227 34611405 -68883569 - Lx4A LINE L1 0 7058 6880 1 849 326 295 62 11 chr15 34611516 34611678 -68883296 + L1M5 LINE L1 5088 5256 -890 1 849 375 23 0 0 chr15 34611678 34611722 -68883252 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 849 326 295 62 11 chr15 34611722 34611737 -68883237 + L1M5 LINE L1 5257 5274 -872 1 849 21 36 0 0 chr15 34611746 34611774 -68883200 + AT_rich Low_complexity Low_complexity 1 28 0 1 849 534 276 39 9 chr15 34611869 34612050 -68882924 + L1MA4A LINE L1 5754 5930 -373 1 849 635 238 85 68 chr15 34612063 34612239 -68882735 - B3A SINE B2 -18 180 2 1 849 627 325 94 4 chr15 34612250 34612494 -68882480 - MER2 DNA MER2_type -77 268 3 1 849 869 242 30 20 chr15 34613023 34613225 -68881749 - MER58A DNA MER1_type -19 205 2 1 849 1927 152 6 9 chr15 34613609 34613928 -68881046 - ORR1A3 LTR MaLR -8 318 1 1 849 230 292 111 0 chr15 34613963 34614035 -68880939 + MLT1H LTR MaLR 132 211 -338 1 849 441 0 0 0 chr15 34614079 34614128 -68880846 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 1 849 516 246 17 0 chr15 34615964 34616082 -68878892 + MIR3 SINE MIR 68 187 -21 1 849 7015 71 2 1 chr15 34616390 34617867 -68877107 + L1_Mus1 LINE L1 4949 6427 -140 1 849 308 111 0 18 chr15 34617915 34617970 -68877004 + (GGA)n Simple_repeat Simple_repeat 2 55 0 1 849 396 0 0 0 chr15 34618466 34618510 -68876464 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 849 607 283 83 18 chr15 34619133 34619302 -68875672 + B3A SINE B2 1 180 -15 2 849 5479 32 0 0 chr15 34619304 34619903 -68875071 + L1Md_T LINE L1 5984 6582 0 2 849 6190 70 103 6 chr15 34619959 34620768 -68874206 + L1_Mus3 LINE L1 5752 6638 0 2 849 24 32 0 0 chr15 34620775 34620806 -68874168 + AT_rich Low_complexity Low_complexity 1 31 0 2 849 819 293 57 20 chr15 34621730 34622030 -68872944 - MER33 DNA MER1_type -13 311 1 2 849 322 348 0 0 chr15 34622609 34622721 -68872253 + (TG)n Simple_repeat Simple_repeat 1 112 0 2 849 439 270 26 0 chr15 34624320 34624435 -68870539 + MLT2C2 LTR ERVL 386 503 -56 2 849 1416 221 73 39 chr15 34624436 34624794 -68870180 + ORR1D2 LTR MaLR 1 370 0 2 849 3998 132 18 35 chr15 34624912 34625564 -68869410 + RLTR26 LTR ERVK 1 641 -1 2 849 570 206 0 0 chr15 34625641 34625738 -68869236 + B3 SINE B2 9 105 -111 2 849 37 0 0 0 chr15 34625750 34625787 -68869187 + AT_rich Low_complexity Low_complexity 1 37 0 2 849 242 220 0 0 chr15 34626673 34626732 -68868242 + T-rich Low_complexity Low_complexity 1 59 0 2 849 327 25 0 0 chr15 34626732 34626772 -68868202 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 2 849 1085 69 8 0 chr15 34626777 34626908 -68868066 - B1_Mus1 SINE Alu -15 133 2 2 849 2155 269 169 14 chr15 34627293 34628320 -68866654 - Charlie1a DNA MER1_type -6 1449 264 2 849 354 338 63 14 chr15 34628879 34629086 -68865888 - Charlie1a DNA MER1_type -1234 221 5 2 849 17298 28 1 2 chr15 34629315 34631991 -68862983 - L1Md_F2 LINE L1 -12 6570 3899 2 849 387 0 0 0 chr15 34632409 34632452 -68862522 + (TC)n Simple_repeat Simple_repeat 2 44 0 2 849 357 307 51 67 chr15 34632502 34632757 -68862217 - MER112 DNA MER1_type -7 254 4 2 849 1275 41 0 20 chr15 34632774 34632923 -68862051 + B1_Mm SINE Alu 2 147 0 2 849 915 279 37 48 chr15 34633161 34633455 -68861519 - B4A SINE B4 0 292 2 2 849 217 171 24 0 chr15 34633938 34633979 -68860995 + CT-rich Low_complexity Low_complexity 1 42 0 2 849 243 146 0 0 chr15 34636166 34636207 -68858767 + (CTG)n Simple_repeat Simple_repeat 1 41 0 2 849 401 300 147 22 chr15 34636275 34636459 -68858515 + MER58A DNA MER1_type 18 224 0 2 849 1732 149 18 71 chr15 34636538 34636878 -68858096 - RLTRETN_Mm LTR ERVK 0 322 1 2 849 283 330 31 0 chr15 34636945 34637042 -68857932 + PB1D10 SINE Alu 18 117 0 2 849 296 48 24 0 chr15 34637045 34637087 -68857887 + (GA)n Simple_repeat Simple_repeat 1 43 0 2 849 292 230 130 54 chr15 34637188 34637280 -68857694 - BC1_Mm scRNA scRNA -52 100 2 2 849 225 323 0 0 chr15 34638466 34638528 -68856446 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 849 480 48 0 0 chr15 34640280 34640343 -68854631 + (TTTTG)n Simple_repeat Simple_repeat 1 63 0 2 849 685 246 15 0 chr15 34640343 34640477 -68854497 - B1_Mur2 SINE Alu -13 136 1 2 849 715 265 71 6 chr15 34641008 34641190 -68853784 - B3A SINE B2 -4 194 1 2 849 368 276 91 10 chr15 34641202 34641301 -68853673 - ID_B1 SINE B4 -19 205 99 2 849 270 310 130 0 chr15 34641212 34641312 -68853662 - B1F1 SINE Alu -32 117 5 2 849 207 0 0 0 chr15 34642368 34642391 -68852583 + (CG)n Simple_repeat Simple_repeat 1 23 0 2 849 312 91 0 0 chr15 34642391 34642435 -68852539 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 849 508 300 92 0 chr15 34642840 34643037 -68851937 - MIRc SINE MIR -51 217 4 2 849 180 0 0 0 chr15 34643844 34643864 -68851110 + (GAAAA)n Simple_repeat Simple_repeat 1 20 0 2 849 202 139 23 0 chr15 34644517 34644560 -68850414 + A-rich Low_complexity Low_complexity 2 45 0 2 849 273 29 0 0 chr15 34644560 34644594 -68850380 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 849 1324 267 58 51 chr15 34644697 34644887 -68850087 + Lx8 LINE L1 6663 6851 -622 2 849 342 0 0 0 chr15 34644887 34644925 -68850049 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 849 1324 267 58 51 chr15 34644925 34645168 -68849806 + Lx8 LINE L1 6852 7098 -375 2 849 474 280 142 5 chr15 34645211 34645401 -68849573 + Lx8 LINE L1 7171 7386 -87 2 849 722 288 84 58 chr15 34645895 34646238 -68848736 + MLT2B1 LTR ERVL 2 489 -78 2 849 190 330 116 11 chr15 34646698 34646793 -68848181 + L2b LINE L2 3266 3370 -5 2 849 1040 279 114 9 chr15 34647092 34647407 -68847567 - MTEa LTR MaLR -12 367 20 2 849 190 200 254 14 chr15 34647871 34647942 -68847032 - L2a LINE L2 -50 3376 3289 2 849 299 325 109 76 chr15 34647995 34648205 -68846769 - LTR16C LTR ERVL -14 475 259 2 849 303 28 0 0 chr15 34648981 34649017 -68845957 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 2 849 297 333 12 85 chr15 34649550 34649714 -68845260 - MER20B DNA MER1_type -630 153 2 2 849 224 257 162 0 chr15 34649763 34649837 -68845137 - B1F SINE Alu -1 148 63 2 849 189 243 0 0 chr15 34650257 34650294 -68844680 + MIR SINE MIR 216 252 -10 2 849 384 22 0 0 chr15 34651087 34651132 -68843842 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 849 356 287 21 31 chr15 34651154 34651251 -68843723 - B4A SINE B4 -10 282 187 2 849 555 16 0 0 chr15 34651736 34651800 -68843174 + (TC)n Simple_repeat Simple_repeat 2 65 0 2 849 498 164 30 24 chr15 34651800 34651969 -68843005 + (TG)n Simple_repeat Simple_repeat 2 171 0 2 849 1347 42 0 0 chr15 34652180 34652346 -68842628 + (GGGAGA)n Simple_repeat Simple_repeat 6 171 0 2 849 930 149 0 13 chr15 34653400 34653631 -68841343 + (TG)n Simple_repeat Simple_repeat 1 228 0 2 849 636 111 0 0 chr15 34653645 34653744 -68841230 + (TTC)n Simple_repeat Simple_repeat 3 101 0 2 849 270 0 0 0 chr15 34653741 34653771 -68841203 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 849 523 347 58 14 chr15 34653771 34654005 -68840969 - B4 SINE B4 -46 246 3 2 849 7724 62 8 9 chr15 34654451 34655522 -68839452 - L1_Mus2 LINE L1 0 6566 5497 2 849 392 211 26 44 chr15 34656881 34656921 -68838053 - L1MC LINE L1 -2306 5479 5441 2 849 279 0 0 0 chr15 34656921 34656952 -68838022 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2 849 423 156 1 1 chr15 34656952 34657026 -68837948 - L1MC LINE L1 -2345 5440 5365 2 849 612 0 0 0 chr15 34657026 34657094 -68837880 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 849 266 288 0 43 chr15 34657101 34657170 -68837804 - RSINE1 SINE B4 -87 78 13 2 849 455 218 7 48 chr15 34658146 34658295 -68836679 + L1MC3 LINE L1 5182 5321 -825 2 849 7101 99 3 8 chr15 34658304 34659291 -68835683 + L1_Mus3 LINE L1 5657 6638 0 2 849 1554 245 132 27 chr15 34659311 34659933 -68835041 + L1MC3 LINE L1 5289 5975 -1810 2 849 791 261 157 58 chr15 34659933 34660226 -68834748 - MTE2a LTR MaLR 0 379 58 2 849 611 296 40 44 chr15 34660237 34660509 -68834465 + L1MC3 LINE L1 5993 6263 -70 2 849 323 323 80 11 chr15 34660531 34660712 -68834262 + L1M4 LINE L1 2244 2432 -3714 2 849 560 311 86 30 chr15 34660710 34660978 -68833996 + L1M7 LINE L1 1272 1554 -4664 2 849 679 294 71 12 chr15 34661415 34661742 -68833232 + L1MC3 LINE L1 6633 6987 -1055 2 849 585 307 0 28 chr15 34662148 34662292 -68832682 + ID_B1 SINE B4 79 218 -6 2 849 525 16 0 0 chr15 34662440 34662502 -68832472 + (TC)n Simple_repeat Simple_repeat 2 63 0 2 849 21122 153 13 35 chr15 34662587 34667222 -68827752 + Lx LINE L1 361 4876 -1007 2 849 7951 59 5 8 chr15 34667236 34668309 -68826665 - L1_Mus1 LINE L1 -2 6565 5491 2 849 7253 130 8 16 chr15 34668310 34670116 -68824858 + Lx LINE L1 4862 6653 -1 2 849 402 21 0 0 chr15 34672167 34672214 -68822760 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 849 297 0 0 0 chr15 34672587 34672620 -68822354 + (A)n Simple_repeat Simple_repeat 1 33 0 2 849 433 299 87 92 chr15 34674681 34675038 -68819936 - ORR1E LTR MaLR -4 355 1 2 849 209 254 43 3 chr15 34675520 34675606 -68819368 + MIR3 SINE MIR 66 154 -54 2 849 270 0 0 0 chr15 34676821 34676851 -68818123 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 849 956 231 10 5 chr15 34678922 34679131 -68815843 - B3 SINE B2 -6 210 1 2 849 242 328 177 14 chr15 34679228 34679584 -68815390 - L1M5 LINE L1 -393 5847 5434 2 849 283 241 144 43 chr15 34679883 34680091 -68814883 - L1M5 LINE L1 -1127 5019 4791 2 849 31 44 0 0 chr15 34680221 34680266 -68814708 + AT_rich Low_complexity Low_complexity 1 45 0 2 849 275 349 105 0 chr15 34680286 34680458 -68814516 - MIRb SINE MIR -31 237 48 2 849 283 349 19 9 chr15 34680525 34680632 -68814342 + MIRb SINE MIR 142 249 -19 2 849 714 167 0 0 chr15 34681188 34681368 -68813606 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 849 216 184 0 0 chr15 34681368 34681417 -68813557 + (CAGAGA)n Simple_repeat Simple_repeat 3 51 0 2 849 648 196 0 0 chr15 34681417 34681596 -68813378 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 849 772 299 99 17 chr15 34682435 34682779 -68812195 - MTEa LTR MaLR 0 379 8 2 849 530 211 98 0 chr15 34683491 34683614 -68811360 + B1_Mur1 SINE Alu 14 148 -1 2 849 444 234 23 115 chr15 34683979 34684153 -68810821 - MTC LTR MaLR -2 419 262 2 849 14357 202 76 40 chr15 34684686 34685885 -68809089 + L1_Mus2 LINE L1 904 2047 -3830 2 849 441 0 0 0 chr15 34685885 34685934 -68809040 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 849 14357 172 107 36 chr15 34685934 34690063 -68804911 + L1_Mus2 LINE L1 2048 6582 0 2 849 384 111 0 0 chr15 34690106 34690178 -68804796 + (A)n Simple_repeat Simple_repeat 1 72 0 2 849 768 145 0 7 chr15 34690180 34690319 -68804655 + L1_Mur2 LINE L1 4512 4649 -1228 2 849 4226 185 87 70 chr15 34690320 34690654 -68804320 - RLTR25A LTR ERVK 0 1103 695 2 849 1386 99 0 16 chr15 34690654 34690848 -68804126 - B2_Mm2 SINE B2 -4 191 1 2 849 4226 185 87 70 chr15 34690848 34691477 -68803497 - RLTR25A LTR ERVK -409 694 115 2 849 333 0 0 0 chr15 34691477 34691514 -68803460 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 849 4226 185 87 70 chr15 34691514 34691634 -68803340 - RLTR25A LTR ERVK -989 114 1 2 849 6869 154 36 9 chr15 34691635 34692835 -68802139 + L1_Mur2 LINE L1 4646 5877 0 2 849 36284 46 1 3 chr15 34692854 34698268 -68796706 + L1Md_T LINE L1 90 5589 -297 2 849 8417 32 17 0 chr15 34698268 34699247 -68795727 + L1Md_T LINE L1 5590 6585 0 2 849 5732 192 37 22 chr15 34699253 34700391 -68794583 + Lx5 LINE L1 5893 7047 -3 2 849 907 31 47 0 chr15 34700405 34700532 -68794442 + (GGAAA)n Simple_repeat Simple_repeat 3 135 0 2 849 1114 97 6 6 chr15 34700536 34700712 -68794262 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 3 849 297 0 0 0 chr15 34700712 34700745 -68794229 + (CAGG)n Simple_repeat Simple_repeat 1 33 0 3 849 541 168 45 27 chr15 34700746 34700856 -68794118 - MTC LTR MaLR -307 114 3 3 849 1612 195 84 6 chr15 34701269 34701615 -68793359 + L1_Mur3 LINE L1 5389 5761 -119 3 849 2517 126 52 12 chr15 34701618 34702021 -68792953 + MTC LTR MaLR 1 419 -2 3 849 4016 198 100 52 chr15 34702021 34702957 -68792017 + Lx7 LINE L1 6435 7415 -281 3 849 204 179 0 0 chr15 34702969 34703008 -68791966 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 849 526 165 106 10 chr15 34703018 34703122 -68791852 - B1_Mur4 SINE Alu -36 114 1 3 849 4942 53 18 2 chr15 34703533 34704184 -68790790 - L1_Mus3 LINE L1 0 6638 5999 3 849 218 197 16 32 chr15 34704485 34704548 -68790426 + CT-rich Low_complexity Low_complexity 3 64 0 3 849 485 294 69 59 chr15 34705263 34705567 -68789407 - RLTR19-int LTR ERVK -3248 2889 2583 3 849 216 195 36 24 chr15 34706339 34706423 -68788551 + GA-rich Low_complexity Low_complexity 3 87 0 3 849 847 193 121 73 chr15 34707318 34707672 -68787302 + RLTR20C LTR ERVK 1 479 -99 3 849 423 0 0 0 chr15 34707672 34707719 -68787255 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 849 528 156 214 23 chr15 34707719 34707792 -68787182 + RLTR20C LTR ERVK 480 576 -2 3 849 468 0 0 0 chr15 34708065 34708117 -68786857 + (TTTTTG)n Simple_repeat Simple_repeat 3 54 0 3 849 3097 23 0 0 chr15 34708117 34708463 -68786511 + ORR1A0 LTR MaLR 1 346 0 3 849 1186 62 0 0 chr15 34708464 34708610 -68786364 - B1_Mus1 SINE Alu -2 146 1 3 849 701 305 95 21 chr15 34709042 34709421 -68785553 + MLT1C LTR MaLR 5 411 -56 3 849 258 221 0 42 chr15 34709718 34709789 -68785185 - MTEa LTR MaLR 0 379 312 3 849 857 166 20 14 chr15 34709790 34709937 -68785037 + B1_Mus1 SINE Alu 1 148 0 3 849 386 275 130 55 chr15 34709939 34710085 -68784889 - MTEa LTR MaLR -156 223 67 3 849 22 70 0 0 chr15 34710089 34710132 -68784842 + AT_rich Low_complexity Low_complexity 1 43 0 3 849 23 0 0 0 chr15 34710525 34710548 -68784426 + AT_rich Low_complexity Low_complexity 1 23 0 3 849 9843 82 9 6 chr15 34710725 34712122 -68782852 - MusHAL1 LINE L1 -635 2077 677 3 849 28273 96 42 47 chr15 34712121 34715238 -68779736 - L1_Mus3 LINE L1 0 6638 3347 3 849 288 0 0 0 chr15 34715238 34715270 -68779704 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 3 849 28273 98 49 61 chr15 34715270 34716550 -68778424 - L1_Mus3 LINE L1 -2537 3346 2070 3 849 207 69 0 0 chr15 34716550 34716579 -68778395 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 3 849 28273 92 40 35 chr15 34716579 34717132 -68777842 - L1_Mus3 LINE L1 -3814 2069 1538 3 849 909 125 7 7 chr15 34717132 34717277 -68777697 + B1_Mus1 SINE Alu 3 147 -1 3 849 28273 92 40 35 chr15 34717277 34718229 -68776745 - L1_Mus3 LINE L1 -3814 1537 619 3 849 303 151 0 0 chr15 34718229 34718282 -68776692 - MTEa LTR MaLR -326 53 1 3 849 368 366 62 22 chr15 34719167 34719393 -68775581 + MIRb SINE MIR 26 260 -8 3 849 326 254 0 0 chr15 34719586 34719653 -68775321 + ID4_ SINE ID 10 76 -7 3 849 320 243 131 68 chr15 34720502 34720723 -68774251 + L1MB1 LINE L1 5592 5826 -465 3 849 743 267 76 76 chr15 34720726 34721014 -68773960 + B4A SINE B4 2 289 -3 3 849 510 17 0 0 chr15 34721017 34721076 -68773898 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 849 520 261 143 17 chr15 34721097 34721335 -68773639 + L1MB1 LINE L1 5859 6126 -42 3 849 1946 97 49 12 chr15 34721395 34721719 -68773255 - RLTR9A LTR ERVK -32 336 1 3 849 853 211 35 25 chr15 34721739 34721938 -68773036 + B3 SINE B2 16 216 0 3 849 666 309 59 85 chr15 34722330 34722755 -68772219 - BGLII_B LTR ERVK -27 414 1 3 849 417 308 27 47 chr15 34723796 34723946 -68771028 - MIRb SINE MIR -65 203 57 3 849 260 217 0 57 chr15 34724004 34724092 -68770882 - MER96B DNA hAT -238 179 97 3 849 916 179 123 0 chr15 34724093 34724272 -68770702 + B3 SINE B2 1 201 -15 3 849 477 342 6 13 chr15 34724337 34724494 -68770480 + B4A SINE B4 137 292 0 3 849 461 190 13 22 chr15 34725832 34725944 -68769030 - B1_Mur1 SINE Alu -3 146 10 3 849 366 164 93 15 chr15 34725987 34726087 -68768887 + MTD LTR MaLR 272 419 0 3 849 730 308 102 16 chr15 34726981 34727285 -68767689 + L1MC LINE L1 5406 5735 -2147 3 849 447 19 0 0 chr15 34727304 34727356 -68767618 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 849 36056 28 13 20 chr15 34727708 34732188 -68762786 + L1Md_A LINE L1 431 4929 -954 3 849 226 183 46 77 chr15 34732188 34732253 -68762721 - RMER20A LTR ERVK -268 248 186 3 849 36056 28 13 20 chr15 34732253 34732906 -68762068 + L1Md_A LINE L1 4930 5586 -297 3 849 8442 35 3 1 chr15 34732906 34733900 -68761074 + L1Md_T LINE L1 5587 6582 0 3 850 848 215 255 20 chr15 34734400 34734547 -68760427 + ORR1D1 LTR MaLR 1 173 -201 3 850 552 30 0 0 chr15 34734547 34734613 -68760361 + (TC)n Simple_repeat Simple_repeat 1 66 0 3 850 848 215 255 20 chr15 34734613 34734759 -68760215 + ORR1D1 LTR MaLR 174 362 -12 3 850 264 154 0 0 chr15 34734773 34734812 -68760162 + L1MC5 LINE L1 6763 6801 -1160 3 850 2960 134 119 2 chr15 34734836 34734895 -68760079 - RLTR20A2 LTR ERVK -25 553 481 3 850 282 95 0 0 chr15 34734895 34734937 -68760037 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 850 2960 134 119 2 chr15 34734937 34735210 -68759764 - RLTR20A2 LTR ERVK -98 480 201 3 850 645 49 0 0 chr15 34735210 34735291 -68759683 + (TTCC)n Simple_repeat Simple_repeat 1 81 0 3 850 2960 134 119 2 chr15 34735291 34735452 -68759522 - RLTR20A2 LTR ERVK -378 200 4 3 850 232 335 83 70 chr15 34735698 34735939 -68759035 - ORR1E LTR MaLR 0 359 116 3 850 647 274 109 30 chr15 34736990 34737163 -68757811 - RMER21B LTR ERV1 -270 572 378 3 850 3095 46 0 0 chr15 34737163 34737535 -68757439 + L1Md_T LINE L1 6211 6582 0 3 850 647 274 109 30 chr15 34737535 34737591 -68757383 - RMER21B LTR ERV1 -465 377 325 3 850 379 298 0 19 chr15 34737647 34737753 -68757221 - RMER21B LTR ERV1 -651 191 88 3 850 264 308 29 34 chr15 34738768 34738943 -68756031 - L1MEf LINE L1 -4517 2123 1950 3 850 2096 163 24 75 chr15 34739101 34739566 -68755408 + BGLII_B LTR ERVK 1 441 0 3 850 1156 312 94 35 chr15 34739620 34740756 -68754218 - L1MEf LINE L1 -4723 1917 712 3 850 187 317 0 0 chr15 34740913 34740954 -68754020 + MIR SINE MIR 217 257 -5 3 850 344 22 22 0 chr15 34741181 34741226 -68753748 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 3 850 472 273 58 73 chr15 34741534 34741673 -68753301 + MTEb LTR MaLR 255 380 -14 3 850 406 339 50 11 chr15 34742030 34742212 -68752762 + MLT1H LTR MaLR 56 244 -305 3 850 524 290 68 52 chr15 34742773 34743024 -68751950 + Zaphod2 DNA Tip100 1122 1376 -2148 3 850 2282 285 58 94 chr15 34743404 34744586 -68750388 + Zaphod2 DNA Tip100 1420 2558 -966 3 850 400 284 117 21 chr15 34745291 34745485 -68749489 - MIR SINE MIR -1 261 54 3 850 596 217 0 0 chr15 34746184 34746290 -68748684 + MER81 DNA AcHobo 1 106 -8 3 850 250 254 0 0 chr15 34747766 34747825 -68747149 - MER117 DNA MER1_type -68 129 71 3 850 745 318 34 42 chr15 34748604 34748925 -68746049 + MLT1G3 LTR MaLR 3 278 -277 3 850 1126 76 0 20 chr15 34749529 34749676 -68745298 + B1_Mus1 SINE Alu 5 148 0 3 850 465 19 0 0 chr15 34749938 34749992 -68744982 + (TTA)n Simple_repeat Simple_repeat 1 54 0 3 850 1024 65 29 0 chr15 34749992 34750131 -68744843 - L1Md_F2 LINE L1 -23 6559 6417 3 850 30 27 0 0 chr15 34751474 34751511 -68743463 + AT_rich Low_complexity Low_complexity 1 37 0 3 850 180 111 0 0 chr15 34752854 34752881 -68742093 + (C)n Simple_repeat Simple_repeat 1 27 0 3 850 432 0 0 0 chr15 34756617 34756665 -68738309 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 850 325 284 14 0 chr15 34757498 34757572 -68737402 + MLT1J2 LTR MaLR 73 147 -301 3 850 234 288 136 0 chr15 34757767 34757833 -68737141 - ID4_ SINE ID 0 83 9 3 850 224 200 17 0 chr15 34760041 34760101 -68734873 + (TGGA)n Simple_repeat Simple_repeat 2 62 0 3 850 354 285 43 53 chr15 34760992 34761158 -68733816 + MLT1J1 LTR MaLR 91 269 -179 3 850 259 276 0 62 chr15 34761191 34761272 -68733702 + MLT1J1 LTR MaLR 361 436 -12 3 850 259 314 53 92 chr15 34761468 34761675 -68733299 - MIRb SINE MIR -56 212 14 3 850 1161 106 0 0 chr15 34761675 34761855 -68733119 + (CCA)n Simple_repeat Simple_repeat 1 180 0 3 850 368 255 28 28 chr15 34761857 34761966 -68733008 + HAL1-2a_MD LINE L1 2373 2481 -543 3 850 539 295 15 8 chr15 34762871 34763004 -68731970 - B4 SINE B4 -158 134 1 3 850 306 0 0 0 chr15 34763156 34763190 -68731784 + (TGGGGG)n Simple_repeat Simple_repeat 2 35 0 3 850 194 240 0 20 chr15 34763301 34763352 -68731622 - MER5B DNA MER1_type -9 169 120 3 850 269 262 8 151 chr15 34765453 34765579 -68729395 + MT2B LTR ERVL 150 257 -344 3 850 670 206 21 35 chr15 34765483 34765624 -68729350 + B1_Mur4 SINE Alu 12 150 0 3 850 306 0 0 0 chr15 34765749 34765783 -68729191 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 850 277 227 38 51 chr15 34766106 34766185 -68728789 - ID4 SINE ID -4 79 2 3 850 24 0 0 0 chr15 34768209 34768233 -68726741 + GC_rich Low_complexity Low_complexity 1 24 0 3 850 208 295 10 111 chr15 34770375 34770474 -68724500 + L4 LINE RTE 373 461 -1568 3 850 367 71 14 41 chr15 34773249 34773322 -68721652 + (TTTTG)n Simple_repeat Simple_repeat 2 72 0 3 850 387 0 0 0 chr15 34773335 34773378 -68721596 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 850 618 332 36 5 chr15 34773390 34773611 -68721363 - B4A SINE B4 -16 276 49 3 850 220 387 0 0 chr15 34775439 34775501 -68719473 - ID4 SINE ID -6 77 16 3 850 486 0 0 0 chr15 34776767 34776821 -68718153 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 850 237 172 42 111 chr15 34777183 34777255 -68717719 - L1M3de LINE L1 -6470 183 117 3 850 392 305 86 35 chr15 34778431 34778628 -68716346 - B4A SINE B4 -4 288 82 3 850 219 367 62 0 chr15 34778690 34778818 -68716156 - MIR SINE MIR -36 226 91 3 850 29 0 0 0 chr15 34778888 34778917 -68716057 + AT_rich Low_complexity Low_complexity 1 29 0 3 850 23286 168 59 13 chr15 34778920 34784808 -68710166 - Lx4B LINE L1 -8 7050 870 3 850 1723 90 0 47 chr15 34785152 34785408 -68709566 - L1Md_F2 LINE L1 -12 6570 6327 3 850 308 330 45 17 chr15 34785524 34785704 -68709270 - B4A SINE B4 -86 206 26 3 850 689 255 0 0 chr15 34785817 34785962 -68709012 + RSINE1 SINE B4 5 149 -16 4 850 5414 121 97 1 chr15 34786059 34786450 -68708524 + RMER17B LTR ERVK 1 398 -560 4 850 683 54 11 0 chr15 34786450 34786542 -68708432 + (TC)n Simple_repeat Simple_repeat 2 94 0 4 850 5414 121 97 1 chr15 34786542 34787024 -68707950 + RMER17B LTR ERVK 399 957 -1 4 850 554 261 0 18 chr15 34787175 34787288 -68707686 - RSINE1 SINE B4 -50 115 5 4 850 1075 203 0 20 chr15 34787339 34787540 -68707434 - B3 SINE B2 -14 202 6 4 850 225 83 0 0 chr15 34787553 34787589 -68707385 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 4 850 228 316 13 0 chr15 34788196 34788275 -68706699 - ID4 SINE ID -2 81 2 4 850 3367 28 23 0 chr15 34788523 34788910 -68706064 - MTA_Mm LTR MaLR 0 396 1 4 850 9446 32 1 3 chr15 34788910 34790010 -68704964 - MTA_Mm-int LTR MaLR 0 1098 1 4 850 3494 28 2 0 chr15 34790010 34790405 -68704569 - MTA_Mm LTR MaLR 0 396 1 4 850 450 0 0 0 chr15 34791092 34791142 -68703832 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 850 198 71 0 0 chr15 34791161 34791189 -68703785 + (TTCC)n Simple_repeat Simple_repeat 3 30 0 4 850 26 74 0 0 chr15 34791690 34791744 -68703230 + AT_rich Low_complexity Low_complexity 1 54 0 4 850 21 36 0 0 chr15 34792009 34792037 -68702937 + AT_rich Low_complexity Low_complexity 1 28 0 4 850 492 217 85 0 chr15 34793046 34793175 -68701799 - Lx6 LINE L1 0 7460 7321 4 850 1186 195 144 13 chr15 34793385 34793697 -68701277 - ORR1C1 LTR MaLR -19 359 7 4 850 190 106 0 41 chr15 34793742 34793791 -68701183 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 4 850 532 303 89 11 chr15 34793844 34794034 -68700940 + B3 SINE B2 1 205 -11 4 850 204 189 37 19 chr15 34794627 34794681 -68700293 + GA-rich Low_complexity Low_complexity 3 57 0 4 850 2093 320 49 18 chr15 34795056 34795929 -68699045 - RodERV21-int LTR ERV1 -202 4789 3890 4 850 664 332 26 36 chr15 34796120 34796614 -68698360 - RodERV21-int LTR ERV1 -3017 4074 3586 4 850 849 52 0 0 chr15 34796684 34796799 -68698175 + (GA)n Simple_repeat Simple_repeat 1 115 0 4 850 5769 276 48 66 chr15 34796868 34798938 -68696036 - RodERV21-int LTR ERV1 -2273 2718 686 4 850 1208 199 39 56 chr15 34799599 34799913 -68695061 - ORR1C2 LTR MaLR -16 368 61 4 850 237 125 0 0 chr15 34799911 34799951 -68695023 - ORR1C2 LTR MaLR -266 108 69 4 850 296 293 12 12 chr15 34800078 34800161 -68694813 + ID4_ SINE ID 1 83 0 4 850 207 100 0 0 chr15 34800174 34800204 -68694770 + (CCTA)n Simple_repeat Simple_repeat 2 31 0 4 850 25 31 0 0 chr15 34800511 34800543 -68694431 + AT_rich Low_complexity Low_complexity 1 32 0 4 850 305 164 0 0 chr15 34800567 34800622 -68694352 - B2_Mm2 SINE B2 -94 101 47 4 850 1140 101 12 0 chr15 34800657 34800825 -68694149 - B2_Mm1t SINE B2 -22 171 2 4 850 194 283 50 0 chr15 34801456 34801516 -68693458 - MIRb SINE MIR -34 234 172 4 850 1013 196 44 0 chr15 34801544 34801748 -68693226 - B3 SINE B2 -3 213 1 4 850 4060 41 47 2 chr15 34802038 34802335 -68692639 + RLTR1B LTR ERV1 1 303 -209 4 850 198 0 0 0 chr15 34802335 34802357 -68692617 + (CCCCAG)n Simple_repeat Simple_repeat 1 22 0 4 850 4060 41 47 2 chr15 34802357 34802549 -68692425 + RLTR1B LTR ERV1 304 510 -2 4 850 1099 126 21 52 chr15 34807132 34807324 -68687650 - B2_Mm2 SINE B2 -9 186 1 4 850 1003 90 8 0 chr15 34807373 34807507 -68687467 + B1_Mus1 SINE Alu 1 135 -13 4 850 270 0 0 0 chr15 34807507 34807537 -68687437 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 4 850 311 225 183 0 chr15 34807949 34808020 -68686954 + RSINE1 SINE B4 21 104 -61 4 850 384 97 0 0 chr15 34808144 34808206 -68686768 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 850 256 274 27 0 chr15 34808746 34808819 -68686155 + CT-rich Low_complexity Low_complexity 1 75 0 4 850 435 207 180 79 chr15 34809858 34810036 -68684938 - B3A SINE B2 -2 196 1 4 850 1259 103 54 0 chr15 34810509 34810694 -68684280 - B2_Mm2 SINE B2 0 195 1 4 850 183 42 0 0 chr15 34810797 34810821 -68684153 + (A)n Simple_repeat Simple_repeat 1 24 0 4 850 515 188 51 0 chr15 34813122 34813239 -68681735 - RSINE1 SINE B4 -12 153 31 4 850 794 226 109 10 chr15 34814666 34814858 -68680116 - B3 SINE B2 -5 211 1 4 850 219 146 0 0 chr15 34814870 34814911 -68680063 + (T)n Simple_repeat Simple_repeat 1 41 0 4 850 515 191 13 88 chr15 34815606 34815743 -68679231 - B1_Mur4 SINE Alu -11 139 1 4 850 549 275 90 43 chr15 34816095 34816308 -68678666 + B4 SINE B4 3 226 -66 4 850 207 0 0 0 chr15 34816308 34816331 -68678643 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 850 549 275 90 43 chr15 34816331 34816394 -68678580 + B4 SINE B4 227 292 0 4 850 868 129 50 7 chr15 34818602 34818742 -68676232 + B1_Mur4 SINE Alu 5 150 0 4 850 358 77 32 42 chr15 34818796 34818891 -68676083 + A-rich Low_complexity Low_complexity 2 95 0 4 850 603 236 150 48 chr15 34819051 34819278 -68675696 + B4A SINE B4 2 251 -41 4 850 924 227 29 15 chr15 34821886 34822092 -68672882 + B3 SINE B2 1 209 -7 4 850 335 276 52 15 chr15 34822458 34822594 -68672380 - B1F SINE Alu -3 146 6 4 850 21 0 0 0 chr15 34822634 34822655 -68672319 + AT_rich Low_complexity Low_complexity 1 21 0 4 850 21 0 0 0 chr15 34822709 34822730 -68672244 + AT_rich Low_complexity Low_complexity 1 21 0 4 850 817 248 23 28 chr15 34823331 34823547 -68671427 + B3 SINE B2 1 215 -1 4 850 329 75 0 19 chr15 34823657 34823711 -68671263 + (CAAT)n Simple_repeat Simple_repeat 1 53 0 4 850 412 333 29 7 chr15 34824722 34824858 -68670116 - B1F SINE Alu -10 139 1 4 850 675 307 21 0 chr15 34824932 34825124 -68669850 - B3A SINE B2 0 198 3 4 850 255 93 0 0 chr15 34825124 34825167 -68669807 + (TTCC)n Simple_repeat Simple_repeat 2 44 0 4 850 191 125 25 0 chr15 34825181 34825221 -68669753 + (TCTA)n Simple_repeat Simple_repeat 3 43 0 4 850 282 307 28 65 chr15 34825792 34825900 -68669074 - PB1D10 SINE Alu 0 117 14 4 850 324 0 0 0 chr15 34825921 34825957 -68669017 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 850 2104 142 56 0 chr15 34825980 34826338 -68668636 - ORR1C1 LTR MaLR 0 378 1 4 850 300 329 0 0 chr15 34826351 34826436 -68668538 - B1F1 SINE Alu -64 85 1 4 850 553 276 30 12 chr15 34826523 34826692 -68668282 - B3 SINE B2 -44 172 1 4 850 297 0 0 0 chr15 34827894 34827927 -68667047 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 4 850 292 132 0 36 chr15 34827950 34828005 -68666969 - B2_Mm2 SINE B2 -94 101 49 4 850 1186 131 11 0 chr15 34828073 34828248 -68666726 - B2_Mm1t SINE B2 -14 179 3 4 850 728 11 0 0 chr15 34828252 34828340 -68666634 - MTB LTR MaLR 0 400 313 4 850 1240 80 19 24 chr15 34828298 34828504 -68666470 + MTB LTR MaLR 196 400 0 4 850 344 304 141 17 chr15 34828858 34829035 -68665939 + MER34 LTR ERV1 344 542 0 4 850 413 311 36 64 chr15 34829368 34829588 -68665386 - MER20 DNA MER1_type 0 219 6 4 850 432 0 0 0 chr15 34830144 34830192 -68664782 + (TC)n Simple_repeat Simple_repeat 2 49 0 4 850 534 31 0 0 chr15 34830192 34830255 -68664719 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 850 480 18 0 0 chr15 34830255 34830311 -68664663 + (GA)n Simple_repeat Simple_repeat 1 57 0 4 850 526 269 38 8 chr15 34830454 34830585 -68664389 - B4 SINE B4 -4 288 154 4 850 452 295 159 34 chr15 34831182 34831565 -68663409 + L1MEf LINE L1 624 1054 -5146 4 850 510 96 0 0 chr15 34833163 34833236 -68661738 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 850 213 275 21 58 chr15 34833404 34833518 -68661456 + MIR SINE MIR 94 200 -68 4 850 269 242 15 15 chr15 34835061 34835128 -68659846 + RSINE1 SINE B4 84 150 -15 4 850 40 59 0 0 chr15 34835135 34835203 -68659771 + AT_rich Low_complexity Low_complexity 1 68 0 4 850 181 339 65 0 chr15 34835580 34835642 -68659332 + MIRc SINE MIR 90 155 -113 4 850 251 136 17 0 chr15 34836542 34836601 -68658373 + GA-rich Low_complexity Low_complexity 1 60 0 4 850 268 319 65 57 chr15 34837741 34837864 -68657110 + MLT1J LTR MaLR 38 161 -351 4 850 304 295 150 25 chr15 34838054 34838214 -68656760 - L1M5 LINE L1 -405 5719 5540 4 850 4017 36 6 0 chr15 34838424 34838896 -68656078 + MT2C_Mm LTR ERVL 1 475 0 4 850 303 254 29 103 chr15 34839735 34839929 -68655045 + L2c LINE L2 3209 3380 -46 4 850 1160 54 0 26 chr15 34840719 34840870 -68654104 + B1_Mm SINE Alu 1 147 0 4 850 251 47 0 65 chr15 34840891 34840937 -68654037 + (A)n Simple_repeat Simple_repeat 1 43 0 4 850 342 271 55 71 chr15 34841716 34841843 -68653131 + PB1 SINE Alu 3 127 0 4 850 3555 80 4 0 chr15 34843264 34843729 -68651245 - L1_Mus2 LINE L1 -2 6564 6098 4 850 519 248 99 50 chr15 34845317 34845640 -68649334 + L1MB7 LINE L1 4195 4531 -1615 4 850 383 271 172 0 chr15 34845683 34845886 -68649088 + L1MB2 LINE L1 5902 6139 -32 4 850 587 266 125 16 chr15 34845941 34846197 -68648777 + L1MB7 LINE L1 4699 4982 -1164 4 850 2105 191 148 35 chr15 34846327 34846841 -68648133 + RMER4B LTR ERVK 14 585 0 4 850 699 253 19 0 chr15 34846845 34846999 -68647975 + B3A SINE B2 1 157 -41 4 850 551 15 15 0 chr15 34847009 34847077 -68647897 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 850 646 12 24 0 chr15 34847079 34847162 -68647812 + (GA)n Simple_repeat Simple_repeat 2 86 0 4 850 904 292 93 21 chr15 34847195 34847678 -68647296 + L1MB7 LINE L1 5345 5862 -322 4 850 315 235 169 67 chr15 34847794 34847972 -68647002 + L1MB7 LINE L1 5981 6176 -2 4 850 23 0 0 0 chr15 34848228 34848251 -68646723 + AT_rich Low_complexity Low_complexity 1 23 0 4 850 286 176 84 42 chr15 34848598 34848669 -68646305 + MLT1D LTR MaLR 420 493 -12 4 850 373 331 37 0 chr15 34848818 34848954 -68646020 - B1F2 SINE Alu -8 141 1 4 850 229 364 111 22 chr15 34849384 34849519 -68645455 - B4 SINE B4 -46 246 100 4 850 279 351 26 26 chr15 34849799 34849916 -68645058 + B3 SINE B2 1 117 -99 4 850 343 308 112 22 chr15 34849887 34850055 -68644919 + B4A SINE B4 100 280 -12 5 850 501 313 26 32 chr15 34850154 34850309 -68644665 + RSINE1 SINE B4 6 159 -6 5 850 1894 145 9 67 chr15 34850366 34850652 -68644322 + ORR1A4 LTR MaLR 1 266 -63 5 850 2072 112 76 0 chr15 34850652 34850956 -68644018 + ORR1A2 LTR MaLR 1 327 0 5 850 1894 145 9 67 chr15 34850956 34851010 -68643964 + ORR1A4 LTR MaLR 267 321 -8 5 850 590 330 68 8 chr15 34851197 34851460 -68643514 + B4 SINE B4 2 280 -12 5 850 261 233 54 70 chr15 34851549 34851678 -68643296 + L1MB8 LINE L1 6051 6177 -1 5 850 2758 22 28 0 chr15 34852537 34852855 -68642119 - IAPLTR2b LTR ERVK 0 327 1 5 850 337 180 0 22 chr15 34853260 34853351 -68641623 + CT-rich Low_complexity Low_complexity 2 90 0 5 850 322 115 80 50 chr15 34853352 34853462 -68641512 + IAPLTR1a_Mm LTR ERVK 214 315 -52 5 850 405 0 0 0 chr15 34854194 34854239 -68640735 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 850 245 0 21 62 chr15 34854426 34854474 -68640500 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 5 850 240 269 0 56 chr15 34858221 34858239 -68636735 + B4A SINE B4 74 87 -205 5 850 341 264 35 26 chr15 34858239 34858352 -68636622 + PB1D10 SINE Alu 4 117 0 5 850 21 36 0 0 chr15 34858424 34858452 -68636522 + AT_rich Low_complexity Low_complexity 1 28 0 5 850 395 238 83 0 chr15 34858703 34858787 -68636187 - PB1D10 SINE Alu -12 105 15 5 850 544 203 162 21 chr15 34859153 34859344 -68635630 + Lx9 LINE L1 7420 7637 -7 5 850 954 122 7 13 chr15 34861116 34861266 -68633708 - URR1A DNA MER1_type 0 226 78 5 850 22 35 0 0 chr15 34862355 34862384 -68632590 + AT_rich Low_complexity Low_complexity 1 29 0 5 850 362 118 69 0 chr15 34863744 34863846 -68631128 + GA-rich Low_complexity Low_complexity 1 109 0 5 850 633 154 22 33 chr15 34863877 34864058 -68630916 + GA-rich Low_complexity Low_complexity 1 179 0 5 850 505 254 121 59 chr15 34864083 34864355 -68630619 + RLTR12B LTR ERVK 240 528 0 5 850 277 279 87 29 chr15 34864382 34864589 -68630385 - L1M3 LINE L1 -840 5300 5082 5 851 260 257 142 0 chr15 34865305 34865453 -68629521 - L1M3 LINE L1 -1526 4614 4446 5 851 5727 3 0 0 chr15 34865480 34866111 -68628863 - L1Md_A LINE L1 0 6582 5952 5 851 382 322 78 0 chr15 34867124 34867239 -68627735 + RSINE1 SINE B4 4 127 -38 5 851 426 20 0 0 chr15 34867240 34867291 -68627683 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 851 25 51 0 0 chr15 34867301 34867340 -68627634 + AT_rich Low_complexity Low_complexity 1 39 0 5 851 36969 55 5 23 chr15 34867752 34874406 -68620568 - L1Md_T LINE L1 0 6582 99 5 851 224 336 54 45 chr15 34875745 34875857 -68619117 + L2 LINE L2 2746 2858 -561 5 851 766 157 72 51 chr15 34876513 34876708 -68618266 + Lx7 LINE L1 7498 7696 0 5 851 287 271 0 0 chr15 34877048 34877118 -68617856 + L1M3 LINE L1 5693 5762 -421 5 851 231 36 0 0 chr15 34877469 34877497 -68617477 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 5 851 423 78 0 0 chr15 34877539 34877603 -68617371 + (TG)n Simple_repeat Simple_repeat 2 65 0 5 851 288 217 31 62 chr15 34877643 34877707 -68617267 + PB1D10 SINE Alu 24 85 -32 5 851 278 352 37 63 chr15 34878719 34878910 -68616064 + MLT1J LTR MaLR 327 512 0 5 851 1064 241 63 0 chr15 34879292 34879562 -68615412 + Lx6 LINE L1 6526 6812 -648 5 851 565 177 22 28 chr15 34879577 34879757 -68615217 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 851 259 282 42 25 chr15 34879774 34879894 -68615080 - RMER17A2 LTR ERVK -541 365 244 5 851 770 239 22 26 chr15 34879900 34880128 -68614846 + Lx6 LINE L1 7216 7442 -18 5 851 790 86 0 0 chr15 34880144 34880261 -68614713 - L1_Mus2 LINE L1 0 6566 6450 5 851 2789 155 32 30 chr15 34880267 34881509 -68613465 - L1VL4 LINE L1 -2285 1532 359 5 851 579 257 41 64 chr15 34881806 34882026 -68612948 + B3 SINE B2 2 216 0 5 851 1731 107 70 0 chr15 34882099 34882370 -68612604 + Lx3_Mus LINE L1 6720 7009 0 5 851 250 309 87 14 chr15 34883642 34883780 -68611194 + L3b LINE CR1 129 276 -206 5 851 6121 101 8 2 chr15 34884169 34885121 -68609853 - L1_Mm LINE L1 -1037 4846 3889 5 851 2540 63 0 0 chr15 34885217 34885535 -68609439 + L1_Mus1 LINE L1 6248 6565 -2 5 851 2989 53 50 0 chr15 34886121 34886498 -68608476 + MTA_Mm LTR MaLR 1 396 0 5 851 985 121 12 0 chr15 34886537 34886702 -68608272 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 5 851 334 383 40 64 chr15 34886815 34887066 -68607908 - L3 LINE CR1 -775 3714 3470 5 851 704 246 34 0 chr15 34887491 34887666 -68607308 + B3A SINE B2 1 181 -17 5 851 258 105 0 0 chr15 34888634 34888672 -68606302 + (TCC)n Simple_repeat Simple_repeat 2 39 0 5 851 539 211 41 46 chr15 34889100 34889294 -68605680 + L1MB4 LINE L1 5659 5851 -329 5 851 717 295 35 8 chr15 34889331 34889634 -68605340 - L1M4 LINE L1 -706 5594 5291 5 851 559 246 44 32 chr15 34889650 34889897 -68605077 - L1M4 LINE L1 -813 5333 5087 5 851 180 0 0 0 chr15 34889945 34889965 -68605009 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 5 851 739 263 194 14 chr15 34890466 34890759 -68604215 + MTE2b LTR MaLR 1 346 -33 5 851 269 209 47 71 chr15 34891345 34891515 -68603459 + (TATTG)n Simple_repeat Simple_repeat 2 167 0 5 851 545 296 39 13 chr15 34891646 34891800 -68603174 - RSINE1 SINE B4 0 165 8 5 851 498 340 109 7 chr15 34891841 34892275 -68602699 + L2a LINE L2 2672 3166 -260 5 851 229 364 58 98 chr15 34892455 34892729 -68602245 - L2c LINE L2 -4 3383 3121 5 851 1124 83 0 0 chr15 34892775 34892920 -68602054 - B1_Mus2 SINE Alu -1 146 2 5 851 215 303 126 52 chr15 34893186 34893360 -68601614 + L2a LINE L2 3196 3382 -5 5 851 262 335 45 30 chr15 34893825 34894009 -68600965 - MIRc SINE MIR -40 228 33 5 851 21 36 0 0 chr15 34894630 34894658 -68600316 + AT_rich Low_complexity Low_complexity 1 28 0 5 851 5458 65 105 1 chr15 34894658 34895399 -68599575 - L1_Mus3 LINE L1 -7 6631 5814 5 851 22 35 0 0 chr15 34895486 34895515 -68599459 + AT_rich Low_complexity Low_complexity 1 29 0 5 851 529 288 241 21 chr15 34897186 34897477 -68597497 + ORR1E LTR MaLR 1 355 -4 5 851 23 54 0 0 chr15 34898681 34898718 -68596256 + AT_rich Low_complexity Low_complexity 1 37 0 5 851 2404 126 3 0 chr15 34899611 34899984 -68594990 + MusHAL1 LINE L1 9 382 -2972 5 851 11168 87 8 30 chr15 34899980 34901790 -68593184 + MusHAL1 LINE L1 950 2719 -634 5 851 587 284 80 14 chr15 34901787 34902076 -68592898 + L1VL2 LINE L1 95 402 -5933 5 851 1266 167 24 17 chr15 34902180 34902467 -68592507 + L1_Mus2 LINE L1 667 955 -5661 5 851 2442 111 0 0 chr15 34902467 34902838 -68592136 + L1_Mus2 LINE L1 4805 5175 -708 5 851 7022 72 7 1 chr15 34902837 34903861 -68591113 + L1_Mus2 LINE L1 5537 6566 0 5 851 10674 157 18 27 chr15 34903857 34904079 -68590895 + L1_Mur2 LINE L1 3254 3475 -2402 5 851 4384 59 41 9 chr15 34904079 34904662 -68590312 + L1Md_F2 LINE L1 5981 6582 0 5 851 10674 157 18 27 chr15 34904662 34906558 -68588416 + L1_Mur2 LINE L1 3476 5352 -525 5 851 476 281 103 25 chr15 34906645 34907079 -68587895 + L1MC3 LINE L1 5170 5629 -715 5 851 1048 313 58 22 chr15 34907098 34907457 -68587517 - MTE2a LTR MaLR -2 377 6 5 851 347 278 144 20 chr15 34907465 34907702 -68587272 + L1MC3 LINE L1 5647 5900 -1885 5 851 333 0 0 0 chr15 34907702 34907739 -68587235 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 851 347 278 144 19 chr15 34907739 34907821 -68587153 + L1MC3 LINE L1 5901 6000 -1785 5 851 311 333 24 0 chr15 34907854 34907938 -68587036 - PB1D10 SINE Alu -8 109 24 5 851 336 308 0 0 chr15 34907952 34908069 -68586905 + L1MC3 LINE L1 6020 6136 -1649 5 851 908 298 33 25 chr15 34908101 34908342 -68586632 + B4 SINE B4 50 292 0 5 851 925 295 121 35 chr15 34908522 34908770 -68586204 + L1MC3 LINE L1 6311 6587 -1198 5 851 2467 140 191 25 chr15 34908770 34909362 -68585612 + RMER6C LTR ERVK 1 690 0 5 851 925 295 121 35 chr15 34909362 34909693 -68585281 + L1MC3 LINE L1 6588 6940 -845 5 851 374 185 152 0 chr15 34909862 34909954 -68585020 + Lx9 LINE L1 6973 7078 -566 5 851 13119 111 45 16 chr15 34909958 34912284 -68582690 + L1_Mur2 LINE L1 2115 4506 -1371 5 851 250 203 48 63 chr15 34912285 34912348 -68582626 + RLTR9A LTR ERVK 1 62 -306 5 851 965 292 168 7 chr15 34912460 34913019 -68581955 + Lx8 LINE L1 6522 7170 -303 5 851 1605 291 69 14 chr15 34914465 34915016 -68579958 - Lx5 LINE L1 -15 7035 6455 5 851 4161 165 75 70 chr15 34915021 34915907 -68579067 + RMER19B LTR ERVK 1 890 -12 5 851 402 21 0 0 chr15 34915940 34915987 -68578987 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 5 851 3226 205 46 6 chr15 34915990 34917223 -68577751 - Lx5 LINE L1 -724 6736 5220 5 851 38109 25 6 6 chr15 34917200 34923527 -68571447 - L1Md_T LINE L1 0 6582 254 5 851 8215 186 264 68 chr15 34923530 34924086 -68570888 - L1_Mur2 LINE L1 -619 5258 4713 5 851 1272 82 21 16 chr15 34924086 34924272 -68570702 - B2_Mm2 SINE B2 -8 187 1 5 851 8215 186 264 68 chr15 34924272 34924896 -68570078 - L1_Mur2 LINE L1 -1165 4712 4077 5 851 450 0 0 0 chr15 34924896 34924946 -68570028 + (GA)n Simple_repeat Simple_repeat 2 51 0 5 851 8215 186 264 68 chr15 34924946 34925060 -68569914 - L1_Mur2 LINE L1 -1801 4076 3968 5 851 1143 54 0 20 chr15 34925060 34925210 -68569764 + B1_Mm SINE Alu 1 147 0 5 851 8215 186 264 68 chr15 34925210 34925828 -68569146 - L1_Mur2 LINE L1 -1910 3967 2939 5 851 542 215 38 15 chr15 34925828 34925844 -68569130 - ID_B1 SINE B4 -12 212 82 5 851 872 71 0 0 chr15 34925844 34925956 -68569018 - B1_Mus2 SINE Alu -35 112 1 5 851 8215 186 264 68 chr15 34925960 34926507 -68568467 - L1_Mur2 LINE L1 -1910 2938 2024 5 851 270 0 0 0 chr15 34926507 34926537 -68568437 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 851 8215 186 264 68 chr15 34926537 34926671 -68568303 - L1_Mur2 LINE L1 -3854 2023 1862 5 851 1853 176 39 17 chr15 34926671 34927030 -68567944 + ORR1B2 LTR MaLR 1 367 0 5 851 8215 191 188 45 chr15 34927030 34928045 -68566929 - L1_Mur2 LINE L1 -4016 1861 892 5 851 24 32 0 0 chr15 34928355 34928386 -68566588 + AT_rich Low_complexity Low_complexity 1 31 0 5 851 2005 161 141 36 chr15 34928418 34928895 -68566079 + RLTR24 LTR ERV1 1 527 -2 5 851 568 254 17 9 chr15 34930349 34930464 -68564510 - RSINE1 SINE B4 -44 121 6 5 851 368 108 0 44 chr15 34930734 34930748 -68564226 + A-rich Low_complexity Low_complexity 1 12 0 5 851 1196 68 0 0 chr15 34930748 34930896 -68564078 + B1_Mus1 SINE Alu 1 148 0 5 851 368 108 0 44 chr15 34930896 34930949 -68564025 + A-rich Low_complexity Low_complexity 13 65 0 5 851 549 110 0 0 chr15 34932135 34932217 -68562757 + (TG)n Simple_repeat Simple_repeat 2 83 0 5 851 315 352 0 21 chr15 34932621 34932714 -68562260 + PB1D10 SINE Alu 17 107 -10 5 851 441 0 0 0 chr15 34932714 34932763 -68562211 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 851 558 0 0 0 chr15 34932763 34932824 -68562150 + (GA)n Simple_repeat Simple_repeat 2 63 0 6 851 4732 135 20 2 chr15 34932827 34933613 -68561361 + Lx2 LINE L1 6088 6887 -110 6 851 238 272 37 0 chr15 34933604 34933685 -68561289 - L1_Mur3 LINE L1 -7622 90 7 6 851 260 296 0 0 chr15 34933812 34933883 -68561091 + (CA)n Simple_repeat Simple_repeat 2 72 0 6 851 1002 43 92 0 chr15 34934358 34934499 -68560475 + B2_Mm2 SINE B2 5 158 -37 6 851 306 67 0 0 chr15 34934503 34934548 -68560426 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 851 200 184 0 0 chr15 34934879 34934917 -68560057 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 851 352 337 70 94 chr15 34934998 34935211 -68559763 + L1MDa LINE L1 649 856 -5777 6 851 438 20 0 0 chr15 34935237 34935288 -68559686 + (TGGA)n Simple_repeat Simple_repeat 2 52 0 6 851 239 244 38 13 chr15 34935298 34935321 -68559653 + (TAGA)n Simple_repeat Simple_repeat 3 27 0 6 851 216 0 0 0 chr15 34935321 34935345 -68559629 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 851 239 244 38 13 chr15 34935345 34935400 -68559574 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 6 851 548 249 106 12 chr15 34935536 34935792 -68559182 + L1MDa LINE L1 2012 2291 -4342 6 851 211 299 38 25 chr15 34935926 34936005 -68558969 + B4 SINE B4 2 81 -211 6 851 28 29 0 0 chr15 34936036 34936071 -68558903 + AT_rich Low_complexity Low_complexity 1 35 0 6 851 309 51 0 0 chr15 34936270 34936309 -68558665 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 6 851 235 309 0 0 chr15 34936540 34936595 -68558379 - RSINE1 SINE B4 -65 100 46 6 851 265 226 43 11 chr15 34937015 34937109 -68557865 + Lx3C LINE L1 6874 6970 -6 6 851 465 66 0 0 chr15 34937837 34937898 -68557076 + (GGA)n Simple_repeat Simple_repeat 2 62 0 6 851 192 369 0 0 chr15 34939356 34939421 -68555553 - MIR3 SINE MIR -40 168 104 6 851 286 291 108 11 chr15 34939811 34940215 -68554759 + L1M3 LINE L1 5011 5468 -712 6 851 759 266 85 0 chr15 34940289 34940466 -68554508 + B3 SINE B2 1 192 -24 6 851 626 142 8 74 chr15 34942503 34942625 -68552349 + URR1A DNA MER1_type 1 114 -112 6 851 297 164 214 83 chr15 34942624 34942792 -68552182 - B2_Mm2 SINE B2 -4 191 2 6 851 862 83 16 0 chr15 34942792 34942913 -68552061 - B2_Mm1t SINE B2 -14 179 57 6 851 515 136 0 0 chr15 34942912 34943000 -68551974 + URR1A DNA MER1_type 95 182 -44 6 851 232 196 102 61 chr15 34942914 34943012 -68551962 - CYRA11_Mm Unknown Y-chromosome -317 300 199 6 851 328 377 86 39 chr15 34945902 34946134 -68548840 + L1MDa LINE L1 387 629 -6004 6 851 401 290 70 6 chr15 34946156 34946312 -68548662 + L1MDa LINE L1 777 942 -5691 6 851 235 233 0 15 chr15 34946390 34946466 -68548508 + L1MDa LINE L1 1056 1142 -5398 6 851 576 289 122 18 chr15 34947666 34948174 -68546800 + L1MDa LINE L1 1605 2165 -4468 6 851 368 165 53 38 chr15 34948261 34948393 -68546581 + L1MDa LINE L1 2369 2502 -4131 6 851 508 239 106 12 chr15 34948510 34948756 -68546218 + L1MDa LINE L1 3073 3341 -3196 6 851 387 358 99 37 chr15 34949622 34949976 -68544998 + L2 LINE L2 2652 3027 -392 6 851 186 43 0 0 chr15 34950023 34950046 -68544928 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6 851 290 236 0 40 chr15 34950311 34950386 -68544588 + ID4 SINE ID 2 73 -10 6 851 595 220 51 0 chr15 34951233 34951351 -68543623 - ID_B1 SINE B4 -15 209 86 6 851 339 323 101 29 chr15 34951369 34951576 -68543398 - RMER15 LTR ERVL -5 570 349 6 851 207 100 0 0 chr15 34951703 34951733 -68543241 + (TCC)n Simple_repeat Simple_repeat 2 31 0 6 851 364 349 73 40 chr15 34953088 34953336 -68541638 - MIR SINE MIR -5 257 2 6 851 24 32 0 0 chr15 34953383 34953414 -68541560 + AT_rich Low_complexity Low_complexity 1 31 0 6 851 202 349 158 8 chr15 34953493 34953620 -68541354 - MER5A DNA MER1_type -5 184 39 6 851 237 257 65 56 chr15 34954078 34954185 -68540789 - MIRb SINE MIR -32 236 129 6 851 23 86 0 0 chr15 34954298 34954356 -68540618 + AT_rich Low_complexity Low_complexity 1 58 0 6 851 342 127 114 0 chr15 34954871 34954950 -68540024 - Lx9 LINE L1 -159 7485 7398 6 851 32 0 0 0 chr15 34954960 34954992 -68539982 + AT_rich Low_complexity Low_complexity 1 32 0 6 851 315 0 0 0 chr15 34955668 34955703 -68539271 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 6 851 22 0 0 0 chr15 34956925 34956947 -68538027 + AT_rich Low_complexity Low_complexity 1 22 0 6 851 287 298 53 0 chr15 34957058 34957172 -68537802 + PB1D9 SINE Alu 1 120 0 6 851 485 320 4 58 chr15 34957565 34957807 -68537167 + Lx8 LINE L1 6724 6952 -521 6 851 182 269 19 19 chr15 34957830 34957883 -68537091 - L4 LINE RTE -889 1140 1088 6 851 22 0 0 0 chr15 34958100 34958122 -68536852 + AT_rich Low_complexity Low_complexity 1 22 0 6 851 1203 54 0 20 chr15 34960931 34961082 -68533892 + B1_Mus1 SINE Alu 1 148 0 6 851 22 0 0 0 chr15 34961313 34961335 -68533639 + AT_rich Low_complexity Low_complexity 1 22 0 6 851 1402 71 5 0 chr15 34961655 34961852 -68533122 + L1_Mus4 LINE L1 5642 5839 -797 6 851 30468 96 5 1 chr15 34961851 34967992 -68526982 + L1_Mus1 LINE L1 402 6567 0 6 851 215 129 15 88 chr15 34967997 34968065 -68526909 + A-rich Low_complexity Low_complexity 2 64 0 6 851 5260 110 26 9 chr15 34968067 34968867 -68526107 + Lx LINE L1 5837 6650 -4 6 851 743 250 32 41 chr15 34968906 34969127 -68525847 + ID_B1 SINE B4 4 222 -2 6 851 1664 224 28 0 chr15 34969212 34969574 -68525400 + ORR1D1 LTR MaLR 3 374 0 6 851 30 83 0 0 chr15 34971827 34971899 -68523075 + AT_rich Low_complexity Low_complexity 1 72 0 6 851 929 146 14 0 chr15 34971901 34972045 -68522929 + B1_Mur4 SINE Alu 5 150 0 6 851 239 29 0 54 chr15 34972046 34972083 -68522891 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 6 851 255 61 0 0 chr15 34972086 34972119 -68522855 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 851 29 28 0 0 chr15 34972124 34972160 -68522814 + AT_rich Low_complexity Low_complexity 1 36 0 6 851 9954 165 43 30 chr15 34972636 34975192 -68519782 + L1_Mur2 LINE L1 882 3473 -2404 6 851 7679 105 23 17 chr15 34975194 34976339 -68518635 + Lx3B LINE L1 5819 6970 -3 6 851 281 241 0 24 chr15 34976364 34976449 -68518525 - Lx4B LINE L1 -18 7040 6958 6 851 8700 124 36 12 chr15 34976452 34977967 -68517007 - L1_Mur1 LINE L1 -271 5615 4064 6 851 231 348 43 36 chr15 34978326 34978466 -68516508 + B1F1 SINE Alu 1 141 -8 6 851 5610 134 12 0 chr15 34978672 34979617 -68515357 + Lx LINE L1 4282 5237 -646 6 851 5124 129 51 16 chr15 34979612 34980529 -68514445 + Lx LINE L1 5702 6650 -4 6 851 979 96 14 0 chr15 34980631 34980777 -68514197 + URR1A DNA MER1_type 79 226 0 6 851 211 146 24 0 chr15 34981704 34981745 -68513229 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 851 258 32 0 0 chr15 34981745 34981776 -68513198 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 851 1208 65 65 0 chr15 34982059 34982227 -68512747 + B2_Mm2 SINE B2 15 193 -2 6 851 7680 83 22 19 chr15 34982910 34984027 -68510947 + Lx3_Mus LINE L1 5889 7009 0 6 851 254 323 140 67 chr15 34985087 34985266 -68509708 - B3 SINE B2 -23 193 2 6 851 274 388 72 7 chr15 34985115 34985268 -68509706 - RSINE1 SINE B4 -2 163 1 6 851 303 265 108 56 chr15 34985365 34985653 -68509321 - Lx9 LINE L1 -8 7636 7334 6 851 7652 53 4 0 chr15 34985872 34986972 -68508002 + L1_Mus1 LINE L1 5464 6567 0 6 851 4487 131 29 3 chr15 34987249 34988014 -68506960 - L1_Mur2 LINE L1 -713 5164 4380 6 851 520 320 97 0 chr15 34988175 34988434 -68506540 + B4A SINE B4 1 284 -8 6 851 234 128 0 0 chr15 34989072 34989111 -68505863 + (T)n Simple_repeat Simple_repeat 1 39 0 6 851 8505 115 32 11 chr15 34989111 34990942 -68504032 - Lx2 LINE L1 0 6997 5130 6 851 837 167 0 0 chr15 34991773 34992082 -68502892 + (TGG)n Simple_repeat Simple_repeat 1 309 0 6 851 389 233 173 55 chr15 34992082 34992209 -68502765 + B1_Mus1 SINE Alu 6 147 -1 6 851 27 0 0 0 chr15 34992407 34992434 -68502540 + AT_rich Low_complexity Low_complexity 1 27 0 6 851 1076 92 6 44 chr15 34992493 34992674 -68502300 - L1Md_F2 LINE L1 0 6582 6409 6 851 311 362 123 18 chr15 34992864 34993148 -68501826 + L2a LINE L2 3111 3424 -2 6 851 342 0 0 0 chr15 34995696 34995734 -68499240 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 852 407 176 117 50 chr15 34996554 34996674 -68498300 - B1_Mm SINE Alu -18 129 2 6 852 611 268 79 0 chr15 34997000 34997127 -68497847 + RSINE1 SINE B4 4 140 -25 6 852 1210 168 47 38 chr15 34997222 34997564 -68497410 - MTB_Mm LTR MaLR -59 360 1 6 852 315 276 132 87 chr15 34997564 34997748 -68497226 + B4 SINE B4 77 269 -23 6 852 222 37 0 0 chr15 34997748 34997775 -68497199 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 852 229 333 16 0 chr15 34998426 34998489 -68496485 + RSINE1 SINE B4 10 73 -92 6 852 272 252 101 0 chr15 34998704 34998823 -68496151 + Charlie1a DNA MER1_type 298 428 -1027 6 852 1117 278 93 15 chr15 34999048 34999457 -68495517 + BGLII_B LTR ERVK 1 441 0 6 852 621 228 175 0 chr15 34999581 34999752 -68495222 + B3 SINE B2 1 201 -15 6 852 821 243 0 7 chr15 34999836 34999989 -68494985 + ORR1B2 LTR MaLR 1 152 -215 6 852 425 160 446 0 chr15 35000000 35000153 -68494821 + ORR1C2 LTR MaLR 164 384 0 1 852 3233 26 15 8 chr15 35000336 35000729 -68494245 + MTA_Mm LTR MaLR 1 396 0 2 852 64 14 0 0 chr15 35001007 35001078 -68493896 + AT_rich Low_complexity Low_complexity 1 71 0 3 852 360 0 0 0 chr15 35001400 35001440 -68493534 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 852 417 20 0 0 chr15 35001542 35001592 -68493382 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 852 372 323 87 80 chr15 35002947 35003077 -68491897 - MT2B2 LTR ERVL -158 426 197 6 852 719 176 48 0 chr15 35003077 35003202 -68491772 - B1_Mus2 SINE Alu -8 139 9 7 852 372 323 87 80 chr15 35003202 35003233 -68491741 - MT2B2 LTR ERVL -158 196 139 6 852 459 0 0 0 chr15 35003609 35003660 -68491314 + (CA)n Simple_repeat Simple_repeat 1 51 0 8 852 359 317 0 0 chr15 35003667 35003768 -68491206 - ID_B1 SINE B4 -43 181 81 9 852 246 245 19 19 chr15 35003773 35003827 -68491147 - ID4_ SINE ID -29 54 1 1 852 286 305 82 33 chr15 35003841 35003963 -68491011 + MER21B LTR ERV1 81 208 -655 1 852 23 33 0 0 chr15 35004529 35004559 -68490415 + AT_rich Low_complexity Low_complexity 1 30 0 1 852 308 271 33 25 chr15 35004563 35004684 -68490290 + L1M3 LINE L1 3790 3911 -2229 1 852 198 0 0 0 chr15 35004803 35004825 -68490149 + (CTG)n Simple_repeat Simple_repeat 2 23 0 1 852 564 238 106 16 chr15 35005024 35005280 -68489694 + L1M3 LINE L1 4377 4655 -1485 1 852 386 203 87 38 chr15 35005429 35005713 -68489261 + L1M3 LINE L1 4774 5127 -1013 1 852 334 275 171 23 chr15 35005733 35006005 -68488969 + L1M3 LINE L1 5184 5486 -688 1 852 517 262 64 53 chr15 35006257 35006539 -68488435 + L1M3 LINE L1 5355 5639 -544 1 852 186 71 0 0 chr15 35007908 35007936 -68487038 + (GGTTG)n Simple_repeat Simple_repeat 1 28 0 1 852 671 207 7 46 chr15 35008795 35008947 -68486027 + B1_Mm SINE Alu 1 146 -1 1 852 332 214 0 22 chr15 35009014 35009105 -68485869 + MER57A-int LTR ERV1 5794 5882 -305 1 852 27 0 0 0 chr15 35009387 35009414 -68485560 + AT_rich Low_complexity Low_complexity 1 27 0 1 852 1926 186 88 10 chr15 35009552 35009937 -68485037 + MTD LTR MaLR 2 416 -3 1 852 312 209 17 42 chr15 35010193 35010313 -68484661 - RMER17D LTR ERVK -389 500 384 2 852 588 288 70 6 chr15 35010938 35011109 -68483865 - B3A SINE B2 -16 182 1 2 852 387 245 131 65 chr15 35011137 35011290 -68483684 + RSINE1 SINE B4 3 165 0 2 852 197 279 84 48 chr15 35011412 35011495 -68483479 - L2c LINE L2 -229 3158 3073 2 852 510 264 43 55 chr15 35011739 35011903 -68483071 + RSINE1 SINE B4 2 163 -2 2 852 259 295 0 0 chr15 35012010 35012071 -68482903 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 852 214 286 127 0 chr15 35012459 35012522 -68482452 + ID4 SINE ID 5 75 -8 2 852 213 338 77 70 chr15 35012522 35012602 -68482372 + ID_B1 SINE B4 5 148 -76 2 852 216 0 0 0 chr15 35013583 35013607 -68481367 + (A)n Simple_repeat Simple_repeat 1 24 0 2 852 482 255 10 0 chr15 35013967 35014069 -68480905 + B1F2 SINE Alu 34 136 -13 2 852 216 0 0 0 chr15 35014070 35014094 -68480880 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 3 852 180 151 52 86 chr15 35015630 35015688 -68479286 + L3 LINE CR1 3509 3564 -925 3 852 204 333 13 13 chr15 35015909 35015988 -68478986 - MIR SINE MIR -176 86 8 3 852 257 333 34 47 chr15 35016030 35016178 -68478796 + MIR SINE MIR 104 249 -13 3 852 28 0 0 0 chr15 35016312 35016340 -68478634 + AT_rich Low_complexity Low_complexity 1 28 0 3 852 699 195 143 21 chr15 35016824 35016974 -68478000 + B3 SINE B2 3 176 -40 3 852 372 22 0 0 chr15 35016974 35017019 -68477955 + (CATA)n Simple_repeat Simple_repeat 2 46 0 3 852 699 195 143 21 chr15 35017019 35017057 -68477917 + B3 SINE B2 177 214 -2 3 852 281 219 60 12 chr15 35017220 35017303 -68477671 + GA-rich Low_complexity Low_complexity 2 88 0 3 852 335 340 55 34 chr15 35017906 35018052 -68476922 + HAL1 LINE L1 1512 1660 -847 3 852 315 336 8 0 chr15 35018141 35018260 -68476714 + HAL1 LINE L1 1800 1919 -588 3 852 218 330 10 71 chr15 35018895 35018993 -68475981 - MIRc SINE MIR -58 210 119 3 852 1644 27 0 0 chr15 35019515 35019701 -68475273 - B2_Mm1a SINE B2 -6 187 2 4 852 1626 42 0 0 chr15 35020653 35020846 -68474128 + B2_Mm1t SINE B2 1 193 0 4 852 1078 184 37 0 chr15 35021050 35021267 -68473707 + URR1A DNA MER1_type 1 225 -1 4 852 293 338 25 0 chr15 35021376 35021456 -68473518 - PB1D10 SINE Alu -14 103 22 4 852 275 271 0 5 chr15 35021789 35021905 -68473069 - Lx5 LINE L1 -72 6986 6849 4 852 1659 53 0 0 chr15 35021936 35022144 -68472830 + L1_Mus1 LINE L1 6360 6567 0 4 852 369 0 0 0 chr15 35022531 35022572 -68472402 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 852 669 307 45 0 chr15 35023078 35023257 -68471717 + B3 SINE B2 1 187 -29 4 852 3104 92 31 2 chr15 35023257 35023705 -68471269 + L1_Mus3 LINE L1 6178 6638 0 4 852 279 0 0 0 chr15 35023740 35023771 -68471203 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 852 47 53 0 0 chr15 35023775 35023850 -68471124 + AT_rich Low_complexity Low_complexity 1 75 0 5 852 3198 51 0 0 chr15 35024254 35024667 -68470307 - L1_Mus2 LINE L1 -567 5999 5587 5 852 4464 63 4 0 chr15 35024691 35025249 -68469725 + L1_Mus1 LINE L1 6008 6567 0 5 852 301 279 98 23 chr15 35025883 35026015 -68468959 + L1MEg LINE L1 423 564 -5520 5 852 613 221 0 80 chr15 35026109 35026247 -68468727 - B1_Mur1 SINE Alu 0 149 23 5 852 216 97 0 0 chr15 35026311 35026342 -68468632 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 852 345 47 0 0 chr15 35026342 35026385 -68468589 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 852 1389 132 18 0 chr15 35026567 35026786 -68468188 - Lx2 LINE L1 0 6997 6775 5 852 1071 112 131 15 chr15 35026786 35026985 -68467989 - Lx2 LINE L1 -354 6643 6422 5 852 246 341 0 0 chr15 35027031 35027113 -68467861 + ID4 SINE ID 2 83 0 5 852 338 66 247 2 chr15 35027192 35027279 -68467695 + Lx LINE L1 6563 6651 -3 5 852 399 168 10 21 chr15 35027386 35027483 -68467491 + (TA)n Simple_repeat Simple_repeat 2 97 0 6 852 249 163 0 0 chr15 35028728 35028777 -68466197 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 852 830 211 99 10 chr15 35030137 35030329 -68464645 + B3 SINE B2 1 209 -7 6 852 7602 48 2 7 chr15 35030332 35031323 -68463651 + L1_Mus1 LINE L1 5588 6654 0 6 852 499 233 117 0 chr15 35031563 35031683 -68463291 + RSINE1 SINE B4 3 136 -29 6 852 224 275 160 53 chr15 35031683 35031732 -68463242 + B2_Mm2 SINE B2 2 188 -7 6 852 402 277 20 3 chr15 35031862 35032157 -68462817 + (CA)n Simple_repeat Simple_repeat 1 300 0 6 852 1359 159 129 22 chr15 35033024 35033503 -68461471 + RMER4B LTR ERVK 14 585 0 6 852 1149 142 16 49 chr15 35033689 35033920 -68461054 + MTC LTR MaLR 2 343 -78 6 852 206 368 32 0 chr15 35033971 35034066 -68460908 - L4 LINE RTE -608 1421 1324 6 852 349 275 86 29 chr15 35034066 35034186 -68460788 + B1F1 SINE Alu 2 120 0 7 852 1238 54 0 0 chr15 35034420 35034568 -68460406 + B1_Mus1 SINE Alu 1 148 0 7 852 228 135 0 0 chr15 35034959 35034996 -68459978 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 7 852 236 292 14 0 chr15 35035259 35035331 -68459643 + RMER5 LTR ERV1 400 472 -62 7 852 811 278 19 14 chr15 35036641 35036856 -68458118 - B3 SINE B2 0 216 1 7 852 606 263 69 11 chr15 35037370 35037558 -68457416 + B3 SINE B2 3 201 -15 7 852 24104 102 14 5 chr15 35037580 35042161 -68452813 - L1_Mus2 LINE L1 0 6566 1939 7 852 681 270 129 43 chr15 35042345 35042624 -68452350 - ORR1E LTR MaLR -15 344 42 7 852 513 237 125 0 chr15 35042692 35042900 -68452074 + Lx6 LINE L1 6678 6885 -575 7 852 1379 213 108 6 chr15 35042896 35043231 -68451743 + Lx6 LINE L1 7064 7432 -28 7 852 456 259 33 53 chr15 35043845 35043996 -68450978 + B1F SINE Alu 2 149 0 7 852 5435 60 1 17 chr15 35046284 35047526 -68447448 + L1Md_A LINE L1 1 752 -5972 8 852 36875 5 0 0 chr15 35047515 35053101 -68441873 + L1Md_A LINE L1 1 5586 -297 8 852 9049 3 0 0 chr15 35053101 35054097 -68440877 + L1Md_A LINE L1 5587 6582 0 8 852 3097 28 6 6 chr15 35054140 35054505 -68440469 + RLTR10B2 LTR ERVK 1 365 0 8 852 831 263 51 25 chr15 35054664 35054980 -68439994 + Lx8 LINE L1 6745 7068 -405 8 852 24 0 0 0 chr15 35055274 35055298 -68439676 + AT_rich Low_complexity Low_complexity 1 24 0 8 852 260 0 57 0 chr15 35055868 35055903 -68439071 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 8 852 241 303 125 50 chr15 35056196 35056356 -68438618 + B4A SINE B4 16 187 -105 8 852 330 237 214 4 chr15 35056429 35056700 -68438274 + L1M2 LINE L1 2997 3324 -2819 8 852 2488 143 84 19 chr15 35056834 35056991 -68437983 + RMER1C Other Other 822 991 -351 8 852 186 43 0 0 chr15 35056991 35057014 -68437960 + (CACCC)n Simple_repeat Simple_repeat 5 27 0 8 852 2488 143 84 19 chr15 35057014 35057341 -68437633 + RMER1C Other Other 992 1337 -5 8 852 288 212 0 0 chr15 35057512 35057578 -68437396 + (TA)n Simple_repeat Simple_repeat 1 66 0 9 852 22 0 0 0 chr15 35057682 35057704 -68437270 + AT_rich Low_complexity Low_complexity 1 22 0 9 852 534 285 178 14 chr15 35057721 35058203 -68436771 + L1ME1 LINE L1 5293 5837 -342 9 852 245 233 13 64 chr15 35059542 35059620 -68435354 + ID4_ SINE ID 3 76 -7 9 852 999 22 0 92 chr15 35059625 35059973 -68435001 + (CA)n Simple_repeat Simple_repeat 1 316 0 9 852 563 73 8 46 chr15 35059986 35060116 -68434858 + (CA)n Simple_repeat Simple_repeat 2 126 0 9 852 2563 109 24 5 chr15 35060220 35060634 -68434340 - L1_Mur2 LINE L1 -1448 4429 4008 9 852 295 290 70 0 chr15 35060932 35061032 -68433942 + B1F1 SINE Alu 43 149 0 9 852 299 261 29 0 chr15 35061039 35061108 -68433866 + ID4 SINE ID 2 72 -11 9 852 544 332 72 43 chr15 35061139 35061436 -68433538 + MLT1A1 LTR MaLR 72 396 -12 9 852 638 276 124 19 chr15 35062382 35062648 -68432326 - ORR1E LTR MaLR -2 357 64 9 852 582 235 21 35 chr15 35062864 35063005 -68431969 - B1F2 SINE Alu -8 141 3 1 852 579 300 54 16 chr15 35063475 35063680 -68431294 + B3A SINE B2 1 216 0 1 852 279 114 0 0 chr15 35063850 35063894 -68431080 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 852 25 31 0 0 chr15 35063905 35063937 -68431037 + AT_rich Low_complexity Low_complexity 1 32 0 1 852 1877 90 0 0 chr15 35064361 35064640 -68430334 + L1VL2 LINE L1 592 870 -5465 1 852 311 301 128 0 chr15 35064770 35064989 -68429985 + L1MA5 LINE L1 5615 5861 -439 1 852 1596 164 105 54 chr15 35065027 35065419 -68429555 + RMER13A LTR ERVK 14 425 -435 1 852 1760 158 35 41 chr15 35065422 35065869 -68429105 + RMER17C LTR ERVK 19 439 -519 1 852 594 242 88 66 chr15 35067270 35067589 -68427385 + RMER17C LTR ERVK 82 407 -3 1 852 5577 217 101 72 chr15 35067591 35069858 -68425116 + RMER17C-int LTR ERVK 1 2333 -905 1 852 216 158 0 0 chr15 35070066 35070123 -68424851 + (TTTG)n Simple_repeat Simple_repeat 1 57 0 1 852 660 272 97 0 chr15 35070150 35070345 -68424629 - B3 SINE B2 0 216 3 1 852 6946 169 59 9 chr15 35070350 35072686 -68422288 + Lx4B LINE L1 4427 6993 -65 1 852 27 29 0 0 chr15 35072686 35072720 -68422254 + AT_rich Low_complexity Low_complexity 1 34 0 1 852 242 328 110 48 chr15 35072998 35073188 -68421786 - MIRb SINE MIR -35 233 36 1 852 21 0 0 0 chr15 35073717 35073738 -68421236 + AT_rich Low_complexity Low_complexity 1 21 0 1 852 238 244 58 47 chr15 35073742 35073782 -68421192 + PB1D10 SINE Alu 1 87 -30 1 852 324 87 22 0 chr15 35073782 35073828 -68421146 + ID_B1 SINE B4 151 197 -27 1 852 1288 174 74 39 chr15 35074704 35075024 -68419950 - ORR1C1 LTR MaLR 0 374 6 1 852 479 297 104 60 chr15 35075088 35075807 -68419167 + L1MC5 LINE L1 6687 7437 -524 1 852 407 255 59 0 chr15 35076485 35076587 -68418387 - B3A SINE B2 -89 109 2 1 852 387 0 0 0 chr15 35077724 35077767 -68417207 + (TTG)n Simple_repeat Simple_repeat 2 44 0 1 852 229 278 81 27 chr15 35078807 35078955 -68416019 - Lx9 LINE L1 -88 7556 7401 1 852 2627 262 82 19 chr15 35079034 35079929 -68415045 - Lx8 LINE L1 -323 7150 6200 1 852 210 176 0 0 chr15 35079941 35079992 -68414982 + GA-rich Low_complexity Low_complexity 1 51 0 1 852 686 239 91 28 chr15 35080011 35080451 -68414523 + Lx7 LINE L1 5677 6185 -1511 1 852 599 215 0 0 chr15 35080508 35080615 -68414359 + RSINE1 SINE B4 5 111 -54 1 852 180 111 0 0 chr15 35080618 35080645 -68414329 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 852 306 106 0 0 chr15 35080645 35080692 -68414282 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 1 852 30 45 0 0 chr15 35081364 35081408 -68413566 + AT_rich Low_complexity Low_complexity 1 44 0 1 852 252 301 48 19 chr15 35081528 35081633 -68413341 + L1ME3B LINE L1 6049 6156 -84 1 852 218 57 0 54 chr15 35081841 35081878 -68413096 + (TTTC)n Simple_repeat Simple_repeat 3 37 0 1 852 545 273 23 15 chr15 35081908 35082038 -68412936 - B1F SINE Alu -9 140 10 1 852 270 239 27 121 chr15 35083274 35083415 -68411559 + MIR SINE MIR 119 260 -8 1 852 482 290 52 0 chr15 35083455 35083610 -68411364 + RSINE1 SINE B4 3 165 0 1 852 266 280 13 0 chr15 35083689 35083764 -68411210 + PB1 SINE Alu 26 101 -26 1 852 564 29 0 0 chr15 35084889 35084959 -68410015 + (GA)n Simple_repeat Simple_repeat 1 70 0 1 852 22 0 0 0 chr15 35085471 35085493 -68409481 + GC_rich Low_complexity Low_complexity 1 22 0 1 852 310 250 150 48 chr15 35086580 35086727 -68408247 + RSINE1 SINE B4 3 164 -1 1 852 986 141 7 0 chr15 35086767 35086916 -68408058 - B2_Mm2 SINE B2 -31 164 15 1 852 237 139 0 0 chr15 35087585 35087621 -68407353 + ORR1D1 LTR MaLR 1 36 -338 1 852 733 22 0 11 chr15 35087752 35087845 -68407129 + RMER16-int LTR ERVK 4073 4164 -1242 1 852 542 265 84 51 chr15 35089320 35089535 -68405439 + RLTR9A LTR ERVK 147 368 0 1 852 2771 237 27 25 chr15 35089535 35089559 -68405415 - MYSERV6-int LTR ERVK -479 6071 6052 1 852 3175 51 5 12 chr15 35089559 35089958 -68405016 + MTA_Mm LTR MaLR 1 396 0 1 852 2771 237 27 25 chr15 35089958 35090420 -68404554 - MYSERV6-int LTR ERVK -499 6051 5578 1 852 2513 168 148 35 chr15 35090420 35090969 -68404005 - RMER19C LTR ERVK 0 611 1 1 852 2771 237 27 25 chr15 35090969 35091270 -68403704 - MYSERV6-int LTR ERVK -973 5577 5282 1 852 2534 111 35 15 chr15 35091284 35091685 -68403289 + RLTR9E LTR ERVK 1 409 0 1 852 7969 106 26 3 chr15 35091984 35093196 -68401778 + ETnERV2-int LTR ERVK 3441 4679 -2727 1 852 3122 37 5 2 chr15 35093194 35093600 -68401374 + ETnERV2-int LTR ERVK 5356 5762 -1644 1 852 2765 199 92 65 chr15 35093589 35094164 -68400810 + RMER16-int LTR ERVK 2696 3309 -2097 1 852 258 26 0 0 chr15 35094164 35094203 -68400771 + L1Md_T LINE L1 6543 6581 -1 1 852 2765 199 92 65 chr15 35094203 35095010 -68399964 + RMER16-int LTR ERVK 3310 4173 -1233 1 852 410 76 152 0 chr15 35095225 35095291 -68399683 + RMER16-int LTR ERVK 7331 7406 0 1 852 2197 98 110 16 chr15 35095292 35095665 -68399309 + RLTR9E LTR ERVK 2 409 0 1 852 300 172 0 0 chr15 35095685 35095743 -68399231 + GA-rich Low_complexity Low_complexity 2 59 0 1 852 10095 186 52 24 chr15 35095743 35098454 -68396520 - MYSERV6-int LTR ERVK -1292 5258 2665 1 852 393 22 0 0 chr15 35098454 35098500 -68396474 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 1 852 805 190 0 21 chr15 35098510 35098655 -68396319 - B1_Mm SINE Alu -5 142 1 1 852 10095 155 42 24 chr15 35098655 35098855 -68396119 - MYSERV6-int LTR ERVK -6295 2664 2472 1 852 186 303 29 29 chr15 35098855 35098923 -68396051 + L3 LINE CR1 3243 3310 -1179 1 852 258 143 0 0 chr15 35098923 35098965 -68396009 - MYSERV6-int LTR ERVK -2298 2962 2921 1 852 314 268 20 59 chr15 35098965 35099167 -68395807 + RMER17A LTR ERVK 225 418 -333 1 852 2755 192 23 32 chr15 35099167 35099817 -68395157 - MYSERV6-int LTR ERVK -6694 2265 1622 1 852 5135 159 32 43 chr15 35099816 35100071 -68394903 + MYSERV16_I-int LTR ERVK 1058 1316 -1010 1 852 4453 136 0 19 chr15 35100071 35100769 -68394205 + Lx3B LINE L1 6286 6970 -3 1 852 5135 159 32 43 chr15 35100769 35100999 -68393975 + MYSERV16_I-int LTR ERVK 1317 1505 -821 1 852 306 0 0 0 chr15 35100999 35101033 -68393941 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 852 5135 159 32 43 chr15 35101033 35101247 -68393727 + MYSERV16_I-int LTR ERVK 1506 1732 -594 1 852 324 0 0 0 chr15 35101247 35101283 -68393691 + (TAA)n Simple_repeat Simple_repeat 2 37 0 1 852 5135 159 32 43 chr15 35101283 35101735 -68393239 + MYSERV16_I-int LTR ERVK 1733 2197 -129 1 852 21153 104 41 206 chr15 35101735 35104929 -68390045 + Lx LINE L1 503 3767 -2116 1 852 5015 44 0 5 chr15 35104929 35105542 -68389432 + L1Md_F3 LINE L1 5963 6572 -12 1 852 21153 95 11 246 chr15 35105542 35108499 -68386475 + Lx LINE L1 3768 5303 -580 1 852 3557 20 0 0 chr15 35108499 35108895 -68386079 - MTA_Mm LTR MaLR 0 396 1 1 852 21153 99 13 118 chr15 35108895 35110237 -68384737 + Lx LINE L1 5304 6648 -6 1 852 479 144 126 0 chr15 35110255 35110366 -68384608 + MYSERV16_I-int LTR ERVK 2186 2310 -16 1 852 1181 55 0 0 chr15 35110377 35110523 -68384451 - B1_Mm SINE Alu 0 147 2 1 852 3372 66 5 16 chr15 35110539 35110988 -68383986 - L1_Mus1 LINE L1 0 6567 6124 1 852 778 272 52 105 chr15 35111028 35111621 -68383353 + RLTR20B3 LTR ERVK 21 525 -3 1 852 1133 184 40 18 chr15 35111621 35111848 -68383126 - MYSERV6-int LTR ERVK -7817 1142 911 1 852 246 286 101 23 chr15 35112187 35112316 -68382658 - RMER4B LTR ERVK -100 485 347 1 852 2175 343 25 22 chr15 35112376 35113369 -68381605 - RodERV21-int LTR ERV1 -202 4789 3794 1 852 2400 108 121 5 chr15 35113373 35113793 -68381181 + RLTR44D LTR ERVK 1 469 -17 1 852 1332 309 49 34 chr15 35113820 35114426 -68380548 - RodERV21-int LTR ERV1 -1206 3785 3170 1 852 6722 48 11 0 chr15 35114426 35115225 -68379749 - RLTR13C2 LTR ERVK 0 808 1 1 852 4775 50 21 2 chr15 35115462 35116038 -68378936 + LTRIS_Mus LTR ERV1 1 587 0 1 852 304 301 90 62 chr15 35116756 35116933 -68378041 - RLTR12B LTR ERVK -228 300 119 1 852 403 125 14 0 chr15 35117012 35117084 -68377890 + RMER10A LTR ERVL 346 418 -24 1 852 437 0 19 0 chr15 35117086 35117139 -68377835 + (TTTA)n Simple_repeat Simple_repeat 1 54 0 1 852 304 342 9 9 chr15 35117213 35117325 -68377649 - MLT1A0 LTR MaLR -3 362 251 1 852 318 242 55 0 chr15 35117444 35117527 -68377447 - MTE2b LTR MaLR -15 364 277 1 852 691 264 171 27 chr15 35117527 35117901 -68377073 - RMER10A LTR ERVL -3 439 12 1 852 285 230 167 20 chr15 35117930 35118032 -68376942 - B1F SINE Alu -30 119 3 1 852 21 0 0 0 chr15 35118285 35118306 -68376668 + AT_rich Low_complexity Low_complexity 1 21 0 1 852 2256 123 2 112 chr15 35118377 35118824 -68376150 - RMER10B LTR ERVL 0 398 1 1 852 33590 75 7 5 chr15 35118899 35124315 -68370659 + L1Md_F2 LINE L1 163 5586 -297 1 852 8342 39 0 3 chr15 35124315 35125302 -68369672 + L1Md_F2 LINE L1 5587 6570 -12 1 852 362 291 0 60 chr15 35126154 35126204 -68368770 + MTEa LTR MaLR 10 59 -320 1 852 1302 108 275 76 chr15 35126204 35126331 -68368643 - RMER17C LTR ERVK 0 410 275 1 852 980 90 6 0 chr15 35126331 35126498 -68368476 + (GA)n Simple_repeat Simple_repeat 1 168 0 1 852 1302 108 275 76 chr15 35126498 35126712 -68368262 - RMER17C LTR ERVK -136 274 1 1 852 362 291 0 60 chr15 35126712 35126778 -68368196 + MTEa LTR MaLR 60 119 -260 1 852 251 256 22 89 chr15 35126930 35127020 -68367954 + RSINE1 SINE B4 82 165 0 1 106 249 33 0 0 chr15 35127284 35127314 -68367660 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 853 1719 145 48 61 chr15 35127314 35127726 -68367248 - RMER17C LTR ERVK 0 410 4 1 853 341 22 22 0 chr15 35127726 35127772 -68367202 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 853 288 223 58 32 chr15 35127823 35127945 -68367029 + MLT1J LTR MaLR 38 201 -311 1 853 802 122 53 26 chr15 35129141 35129293 -68365681 - ORR1B1 LTR MaLR 0 394 239 1 853 246 81 0 0 chr15 35130289 35130326 -68364648 + (CAGAGA)n Simple_repeat Simple_repeat 4 40 0 1 853 801 158 5 95 chr15 35131737 35131926 -68363048 + MYSERV-int LTR ERVK 2613 2784 -6175 1 853 2994 260 78 40 chr15 35131926 35133040 -68361934 + MYSERV-int LTR ERVK 4280 5382 -1168 1 853 1642 178 30 3 chr15 35133031 35133335 -68361639 + MYSERV6-int LTR ERVK 8392 8703 -256 1 853 280 146 0 35 chr15 35133427 35133484 -68361490 + MYSERV-int LTR ERVK 6298 6352 -198 1 853 960 175 15 15 chr15 35133612 35133809 -68361165 + MYSERV-int LTR ERVK 6350 6546 -4 1 853 504 0 0 0 chr15 35134047 35134103 -68360871 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 853 326 222 43 0 chr15 35134545 35134707 -68360267 + (TA)n Simple_repeat Simple_repeat 2 170 0 1 853 516 238 0 0 chr15 35136059 35136164 -68358810 + B1_Mur1 SINE Alu 3 107 -42 1 853 180 217 0 0 chr15 35136328 35136374 -68358600 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 853 233 289 26 0 chr15 35136374 35136450 -68358524 + (TAAA)n Simple_repeat Simple_repeat 3 80 0 1 853 459 0 0 0 chr15 35137313 35137364 -68357610 + (TC)n Simple_repeat Simple_repeat 1 51 0 1 853 369 43 0 0 chr15 35137808 35137855 -68357119 + (CGTG)n Simple_repeat Simple_repeat 1 47 0 1 853 558 67 0 0 chr15 35138224 35138299 -68356675 + (TG)n Simple_repeat Simple_repeat 1 75 0 2 853 206 329 21 7 chr15 35138999 35139140 -68355834 + (TG)n Simple_repeat Simple_repeat 2 144 0 2 853 297 339 0 17 chr15 35139199 35139235 -68355739 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 853 2753 117 35 35 chr15 35139235 35139694 -68355280 + RMER6B LTR ERVK 1 459 -2 2 853 297 339 0 17 chr15 35139694 35139837 -68355137 + (TG)n Simple_repeat Simple_repeat 2 142 0 2 853 275 361 0 11 chr15 35139985 35140167 -68354807 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 853 224 335 0 40 chr15 35140143 35140317 -68354657 + (TATG)n Simple_repeat Simple_repeat 4 170 0 2 853 296 379 0 0 chr15 35140248 35140425 -68354549 + (TG)n Simple_repeat Simple_repeat 2 178 0 2 853 1208 28 14 0 chr15 35140837 35140982 -68353992 + B1_Mm SINE Alu 1 147 0 2 853 284 327 0 18 chr15 35141064 35141176 -68353798 + GA-rich Low_complexity Low_complexity 1 110 0 2 853 1137 174 27 5 chr15 35142492 35142711 -68352263 - URR1B DNA MER1_type 0 225 2 2 853 279 300 53 36 chr15 35142729 35142818 -68352156 + L1MB7 LINE L1 3405 3499 -2647 2 853 198 0 0 0 chr15 35142818 35142840 -68352134 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 2 853 279 300 53 36 chr15 35142840 35142975 -68351999 + L1MB7 LINE L1 3500 3632 -2514 2 853 582 272 108 15 chr15 35142992 35143261 -68351713 + L1MB7 LINE L1 4146 4439 -1707 2 853 908 282 108 51 chr15 35143619 35144127 -68350847 + L1MA4 LINE L1 5369 5905 -395 2 853 385 236 1 0 chr15 35144121 35144208 -68350766 + L1MB7 LINE L1 5403 5490 -2505 2 853 1604 139 7 66 chr15 35144212 35144513 -68350461 + ORR1A2 LTR MaLR 1 283 -44 2 853 1200 54 0 13 chr15 35144515 35144664 -68350310 + B1_Mus2 SINE Alu 1 147 0 2 853 657 96 0 0 chr15 35144666 35144760 -68350214 + (GAAA)n Simple_repeat Simple_repeat 2 95 0 2 853 8500 35 0 2 chr15 35144765 35145763 -68349211 + L1Md_F2 LINE L1 5587 6582 0 2 853 307 89 0 0 chr15 35145763 35145808 -68349166 + ORR1A2 LTR MaLR 274 318 -8 2 853 728 273 104 0 chr15 35145818 35146107 -68348867 + L1MB7 LINE L1 5497 5815 -369 2 853 557 233 144 79 chr15 35147093 35147433 -68347541 + L1MB7 LINE L1 5813 6174 -10 2 853 380 310 58 15 chr15 35148418 35148624 -68346350 + CR1_Mam LINE CR1 1146 1360 -844 2 853 402 216 72 0 chr15 35149294 35149391 -68345583 + ORR1E LTR MaLR 1 104 -255 2 853 831 272 98 0 chr15 35149423 35149677 -68345297 + MTEa LTR MaLR 1 279 -100 2 853 270 222 10 29 chr15 35149687 35149753 -68345221 + CT-rich Low_complexity Low_complexity 39 103 0 2 853 2078 131 24 36 chr15 35149753 35150164 -68344810 + RMER17C LTR ERVK 5 410 0 2 853 270 222 10 29 chr15 35150164 35150199 -68344775 + polypyrimidine Low_complexity Low_complexity 4 38 0 2 853 326 197 0 0 chr15 35150207 35150273 -68344701 + MTEa LTR MaLR 314 379 0 2 853 283 288 30 46 chr15 35150364 35150495 -68344479 + MTEb LTR MaLR 230 358 -21 2 853 231 250 0 0 chr15 35150980 35151024 -68343950 + tRNA-Ala-GCY_ tRNA tRNA 15 58 -17 2 853 339 25 0 0 chr15 35151037 35151077 -68343897 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 853 608 175 8 0 chr15 35151573 35151699 -68343275 + (TA)n Simple_repeat Simple_repeat 1 127 0 2 853 238 195 13 13 chr15 35151701 35151779 -68343195 + GA-rich Low_complexity Low_complexity 2 79 0 2 853 902 133 21 7 chr15 35151779 35151923 -68343051 + B1_Mus2 SINE Alu 2 147 0 2 853 758 225 65 40 chr15 35152669 35152868 -68342106 - B4 SINE B4 -4 288 85 2 853 288 0 0 0 chr15 35152917 35152949 -68342025 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 853 701 220 49 14 chr15 35152951 35153094 -68341880 - B1_Mur1 SINE Alu -1 148 1 2 853 277 330 18 0 chr15 35154681 35154790 -68340184 + MIR SINE MIR 23 133 -129 2 853 870 36 0 0 chr15 35154910 35155020 -68339954 + (GA)n Simple_repeat Simple_repeat 1 110 0 2 853 252 213 0 0 chr15 35155363 35155424 -68339550 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 853 1613 231 195 51 chr15 35155570 35156123 -68338851 - Lx7 LINE L1 0 7696 7056 2 853 459 0 0 0 chr15 35156123 35156174 -68338800 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 853 1613 231 195 51 chr15 35156174 35156308 -68338666 - Lx7 LINE L1 -641 7055 6911 2 853 4474 142 22 11 chr15 35156310 35157166 -68337808 + Lx5 LINE L1 5493 6367 -683 2 853 3431 20 0 15 chr15 35157145 35157545 -68337429 - L1Md_F2 LINE L1 -577 6005 5612 2 853 4977 31 7 18 chr15 35157545 35158008 -68336966 + L1Md_F2 LINE L1 5989 6452 -130 2 853 3276 40 25 0 chr15 35158008 35158409 -68336565 + RLTR10A LTR ERVK 1 411 0 2 853 4977 31 7 18 chr15 35158409 35158546 -68336428 + L1Md_F2 LINE L1 6453 6582 0 2 853 1572 230 84 38 chr15 35158551 35159052 -68335922 - RMER19C LTR ERVK 0 611 88 2 853 1830 150 30 10 chr15 35159080 35159383 -68335591 + Lx5 LINE L1 6375 6683 -375 2 853 951 266 156 18 chr15 35159379 35159705 -68335269 - RMER1B Other Other -665 401 31 2 853 678 286 64 64 chr15 35160159 35160541 -68334433 + RLTR26 LTR ERVK 1 417 -225 2 853 337 319 58 7 chr15 35160897 35161036 -68333938 - HAL1 LINE L1 -701 1806 1661 2 853 361 317 107 6 chr15 35161215 35161383 -68333591 - MLT1J LTR MaLR -218 294 110 2 853 522 0 0 0 chr15 35161485 35161543 -68333431 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 853 718 292 102 14 chr15 35161649 35162090 -68332884 + L1ME3A LINE L1 5564 6043 -130 2 853 620 132 0 9 chr15 35162090 35162197 -68332777 + (TCCCC)n Simple_repeat Simple_repeat 1 106 0 2 853 3412 183 156 46 chr15 35162451 35163285 -68331689 - RMER1B Other Other -4 1062 44 2 853 1611 185 111 23 chr15 35163412 35163569 -68331405 + ORR1D1 LTR MaLR 2 164 -210 2 853 558 0 0 0 chr15 35163569 35163631 -68331343 + (TC)n Simple_repeat Simple_repeat 2 63 0 2 853 1611 185 111 23 chr15 35163631 35163816 -68331158 + ORR1D1 LTR MaLR 165 374 0 2 853 2391 149 64 20 chr15 35165024 35165478 -68329496 - RMER1B Other Other -180 886 384 2 853 237 143 143 0 chr15 35165567 35165616 -68329358 - Lx8 LINE L1 -519 6954 6899 2 853 327 286 20 20 chr15 35165678 35165778 -68329196 - PB1D10 SINE Alu -1 116 17 2 853 556 257 81 51 chr15 35166130 35166306 -68328668 + B3 SINE B2 9 191 -25 2 853 2337 164 46 27 chr15 35166306 35166719 -68328255 - MTC LTR MaLR 0 421 1 2 853 556 257 81 51 chr15 35166719 35166739 -68328235 + B3 SINE B2 192 211 -5 2 853 232 185 0 69 chr15 35166926 35166984 -68327990 - Charlie8 DNA MER1_type -2270 158 105 2 853 289 257 124 38 chr15 35167973 35168078 -68326896 + RLTR14 LTR ERV1 224 337 -45 2 853 406 328 72 82 chr15 35168105 35168510 -68326464 + RLTR14-int LTR ERV1 2 402 -4915 2 853 397 188 38 169 chr15 35168732 35168892 -68326082 + RLTR14-int LTR ERV1 447 585 -4732 2 853 591 281 23 140 chr15 35168937 35169280 -68325694 + RLTR14-int LTR ERV1 601 903 -4414 2 853 253 312 72 54 chr15 35169247 35169413 -68325561 + RLTR14-int LTR ERV1 1219 1387 -6169 2 853 361 330 5 68 chr15 35170395 35170587 -68324387 + RLTR14-int LTR ERV1 2229 2408 -2655 2 853 807 291 78 41 chr15 35171034 35171527 -68323447 + RLTR14-int LTR ERV1 3254 3645 -1672 2 853 641 293 5 10 chr15 35171849 35172042 -68322932 + RLTR14-int LTR ERV1 4032 4223 -1094 2 853 286 214 34 45 chr15 35172150 35172238 -68322736 + RLTR14-int LTR ERV1 5228 5314 -3 2 853 3130 74 0 5 chr15 35173216 35173612 -68321362 - L1_Mus1 LINE L1 0 6567 6174 2 853 2807 79 0 13 chr15 35173612 35173984 -68320990 + L1_Mus1 LINE L1 5762 6128 -439 2 853 275 244 106 196 chr15 35174680 35174935 -68320039 - RMER1C Other Other -3 1339 1108 2 853 582 205 138 118 chr15 35174720 35174974 -68320000 - Lx8 LINE L1 -29 7444 7186 2 853 22 0 0 0 chr15 35174988 35175010 -68319964 + AT_rich Low_complexity Low_complexity 1 22 0 2 853 256 355 0 0 chr15 35175496 35175589 -68319385 - ID_B1 SINE B4 -49 175 83 2 853 333 272 42 81 chr15 35175774 35175961 -68319013 - Charlie2a DNA MER1_type -133 2728 2545 2 853 493 270 78 13 chr15 35175961 35176115 -68318859 - RSINE1 SINE B4 0 165 2 2 853 333 272 42 81 chr15 35176115 35176163 -68318811 - Charlie2a DNA MER1_type -317 2544 2502 2 853 258 308 12 25 chr15 35176180 35176260 -68318714 - ID4_ SINE ID -4 79 1 2 853 223 189 0 19 chr15 35176264 35176318 -68318656 + CT-rich Low_complexity Low_complexity 1 53 0 2 853 202 328 0 0 chr15 35176326 35176384 -68318590 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 853 530 304 117 39 chr15 35176389 35176646 -68318328 - B4A SINE B4 -13 279 3 2 853 299 388 0 0 chr15 35176663 35176766 -68318208 + ID_B1 SINE B4 84 186 -38 2 853 405 0 0 0 chr15 35176783 35176828 -68318146 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 853 261 139 0 0 chr15 35176832 35176875 -68318099 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 853 263 320 73 68 chr15 35176876 35177153 -68317821 - Charlie2a DNA MER1_type -1062 1799 1519 2 853 1260 109 27 0 chr15 35177153 35177336 -68317638 - B2_Mm2 SINE B2 -5 190 3 2 853 263 320 73 68 chr15 35177336 35177664 -68317310 - Charlie2a DNA MER1_type -1343 1518 1192 2 853 17061 100 11 3 chr15 35177664 35180829 -68314145 - L1_Mus3 LINE L1 -23 6615 3423 2 853 6367 87 11 22 chr15 35180823 35181973 -68313001 - L1_Mus3 LINE L1 -3721 2162 1029 2 853 378 255 44 32 chr15 35181969 35182127 -68312847 + L1MC LINE L1 5199 5358 -788 2 853 927 234 16 0 chr15 35182154 35182346 -68312628 + ID_B1 SINE B4 22 216 -8 2 853 281 159 0 16 chr15 35182351 35182415 -68312559 + (CAGA)n Simple_repeat Simple_repeat 3 65 0 2 853 614 254 7 29 chr15 35182903 35183041 -68311933 + B1_Mur1 SINE Alu 1 135 -14 2 853 431 236 0 16 chr15 35183590 35183715 -68311259 + (CATA)n Simple_repeat Simple_repeat 1 123 0 2 853 443 307 98 14 chr15 35183868 35184118 -68310856 + L1MD2 LINE L1 5791 6066 -113 2 853 229 308 62 0 chr15 35184499 35184564 -68310410 + ID4 SINE ID 1 69 -14 2 853 285 98 0 0 chr15 35184580 35184621 -68310353 + (GGGAGA)n Simple_repeat Simple_repeat 1 41 0 2 853 520 308 27 6 chr15 35186228 35186411 -68308563 - MER5A DNA MER1_type -1 188 2 2 853 351 236 0 14 chr15 35186419 35186492 -68308482 + tRNA-Ala-GCA tRNA tRNA 1 72 -3 2 853 301 208 0 0 chr15 35186517 35186570 -68308404 + B3A SINE B2 1 53 -145 2 853 459 0 0 0 chr15 35187638 35187689 -68307285 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 853 569 185 6 0 chr15 35187690 35187868 -68307106 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 853 312 282 13 0 chr15 35188582 35188660 -68306314 + 7SLRNA srpRNA srpRNA 5 83 -231 2 853 1308 252 55 6 chr15 35189094 35189441 -68305533 - MTD LTR MaLR -12 407 44 2 853 22133 109 6 2 chr15 35189542 35193583 -68301391 - L1_Mus3 LINE L1 0 6638 2583 2 853 582 163 33 3 chr15 35193730 35193864 -68301110 + ORR1D1 LTR MaLR 169 310 -74 2 853 2813 183 105 3 chr15 35193870 35194472 -68300502 + Lx9 LINE L1 6982 7644 0 2 853 24 0 0 0 chr15 35194795 35194819 -68300155 + AT_rich Low_complexity Low_complexity 1 24 0 2 853 1044 119 0 0 chr15 35194963 35195140 -68299834 + (CA)n Simple_repeat Simple_repeat 1 177 0 2 853 326 311 16 0 chr15 35195428 35195550 -68299424 + MIRb SINE MIR 88 211 -57 2 853 189 301 181 39 chr15 35196171 35196558 -68298416 + L2 LINE L2 2069 2510 -909 2 853 242 278 179 25 chr15 35196801 35196975 -68297999 - MIRb SINE MIR -23 245 50 2 853 264 220 9 165 chr15 35197028 35197137 -68297837 + B3A SINE B2 107 198 0 2 853 275 242 0 57 chr15 35197666 35197736 -68297238 + tRNA-Ala-GCY_ tRNA tRNA 3 68 -7 2 853 270 228 0 122 chr15 35197736 35197750 -68297224 + ID4_ SINE ID 24 83 0 3 853 460 254 41 8 chr15 35198099 35198222 -68296752 - B4A SINE B4 -37 255 129 3 853 381 264 89 18 chr15 35199312 35199424 -68295550 + RSINE1 SINE B4 46 165 0 3 853 362 226 37 47 chr15 35200570 35200677 -68294297 + RSINE1 SINE B4 23 128 -37 3 853 441 0 0 0 chr15 35200690 35200739 -68294235 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 853 199 333 25 67 chr15 35202543 35202662 -68292312 + L2b LINE L2 3219 3333 -54 3 853 189 0 0 0 chr15 35203023 35203044 -68291930 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3 853 24 32 0 0 chr15 35203599 35203630 -68291344 + AT_rich Low_complexity Low_complexity 1 31 0 3 853 261 0 0 0 chr15 35204366 35204395 -68290579 + (A)n Simple_repeat Simple_repeat 1 29 0 3 853 645 236 0 0 chr15 35204734 35204908 -68290066 + (TG)n Simple_repeat Simple_repeat 2 175 0 3 853 513 238 0 0 chr15 35204925 35205068 -68289906 + (TG)n Simple_repeat Simple_repeat 2 144 0 3 853 889 266 22 36 chr15 35205266 35205543 -68289431 + B4A SINE B4 2 274 -18 3 853 711 180 11 11 chr15 35205644 35205824 -68289150 + GA-rich Low_complexity Low_complexity 1 180 0 3 853 813 49 0 0 chr15 35205854 35205956 -68289018 + (GGGA)n Simple_repeat Simple_repeat 4 105 0 3 853 643 259 58 12 chr15 35207092 35207264 -68287710 - ID_B1 SINE B4 -41 183 4 3 853 374 274 59 0 chr15 35207424 35207526 -68287448 + PB1D10 SINE Alu 1 108 -9 3 853 247 242 16 16 chr15 35207699 35207762 -68287212 + RSINE1 SINE B4 1 63 -102 3 853 900 53 0 0 chr15 35207769 35207883 -68287091 + (CA)n Simple_repeat Simple_repeat 2 115 0 3 853 916 265 173 8 chr15 35209257 35209615 -68285359 - MTD LTR MaLR 0 419 3 3 853 343 262 83 21 chr15 35209713 35209857 -68285117 - RMER15 LTR ERVL -20 555 403 3 853 723 232 175 57 chr15 35209865 35210094 -68284880 - MTD LTR MaLR -14 405 143 3 853 1185 75 0 0 chr15 35210094 35210241 -68284733 - B1_Mm SINE Alu 0 147 1 3 853 723 232 181 59 chr15 35210241 35210323 -68284651 - MTD LTR MaLR -277 142 66 3 853 731 288 5 23 chr15 35210786 35211006 -68283968 + MT2A LTR ERVL 3 218 -315 3 853 631 227 59 75 chr15 35211000 35211154 -68283820 + MTD LTR MaLR 223 386 -33 3 853 1619 52 0 0 chr15 35211154 35211347 -68283627 - B2_Mm1a SINE B2 0 193 1 3 853 631 227 59 75 chr15 35211347 35211378 -68283596 + MTD LTR MaLR 387 405 -14 3 853 186 345 110 11 chr15 35211380 35211562 -68283412 - MIR SINE MIR -32 230 31 3 853 534 291 49 7 chr15 35211966 35212108 -68282866 - RSINE1 SINE B4 -15 150 3 3 853 531 258 173 39 chr15 35212725 35212979 -68281995 + B4A SINE B4 2 289 -3 3 853 297 0 0 0 chr15 35212986 35213019 -68281955 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 853 522 0 0 0 chr15 35217535 35217593 -68277381 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 853 866 120 6 0 chr15 35217786 35217961 -68277013 + (GA)n Simple_repeat Simple_repeat 1 176 0 3 853 567 262 6 42 chr15 35218602 35218769 -68276205 + RSINE1 SINE B4 5 165 0 3 853 764 189 8 8 chr15 35219064 35219197 -68275777 + B1_Mur2 SINE Alu 4 136 -13 3 853 207 0 0 0 chr15 35219197 35219220 -68275754 + (CAA)n Simple_repeat Simple_repeat 1 23 0 3 853 274 175 175 0 chr15 35221812 35221892 -68273082 - MER5A DNA MER1_type 0 189 96 3 853 252 0 0 0 chr15 35222212 35222240 -68272734 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 853 414 0 0 0 chr15 35223291 35223337 -68271637 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 853 225 0 0 0 chr15 35227269 35227294 -68267680 + (TTA)n Simple_repeat Simple_repeat 2 26 0 3 853 324 0 0 0 chr15 35228304 35228340 -68266634 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 853 378 0 0 0 chr15 35234392 35234434 -68260540 + (TC)n Simple_repeat Simple_repeat 1 42 0 3 853 351 125 0 0 chr15 35234435 35234507 -68260467 + (TG)n Simple_repeat Simple_repeat 1 72 0 3 853 459 260 110 0 chr15 35235075 35235202 -68259772 - B1F SINE Alu -2 147 7 3 853 476 311 47 47 chr15 35236952 35237188 -68257786 - MLT1L LTR MaLR -221 389 154 3 853 297 167 0 0 chr15 35237234 35237288 -68257686 + GA-rich Low_complexity Low_complexity 3 56 0 3 853 1080 136 0 0 chr15 35237288 35237464 -68257510 + (GAA)n Simple_repeat Simple_repeat 3 178 0 3 853 388 281 52 0 chr15 35237498 35237668 -68257306 + B4 SINE B4 26 270 -22 3 853 570 15 0 0 chr15 35237689 35237756 -68257218 + (CA)n Simple_repeat Simple_repeat 1 67 0 3 853 183 42 0 0 chr15 35239312 35239336 -68255638 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 853 252 86 0 0 chr15 35239510 35239545 -68255429 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 853 285 176 0 0 chr15 35240708 35240782 -68254192 + CT-rich Low_complexity Low_complexity 1 74 0 3 853 809 289 5 37 chr15 35240878 35241094 -68253880 - B4A SINE B4 0 292 84 3 853 316 0 83 17 chr15 35241094 35241154 -68253820 + (TTTG)n Simple_repeat Simple_repeat 2 65 0 3 853 235 254 17 0 chr15 35241158 35241217 -68253757 - B4A SINE B4 -206 86 27 3 853 579 29 0 0 chr15 35241391 35241460 -68253514 + (GGA)n Simple_repeat Simple_repeat 2 70 0 3 853 22 0 0 0 chr15 35241504 35241526 -68253448 + AT_rich Low_complexity Low_complexity 1 22 0 3 853 818 177 0 0 chr15 35242407 35242537 -68252437 - B1_Mur4 SINE Alu -18 132 3 3 853 602 240 0 0 chr15 35242577 35242706 -68252268 - RSINE1 SINE B4 -33 132 4 3 853 239 72 0 23 chr15 35243144 35243187 -68251787 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 3 853 424 0 18 18 chr15 35243187 35243244 -68251730 + (GA)n Simple_repeat Simple_repeat 2 58 0 3 853 294 203 14 28 chr15 35243499 35243570 -68251404 + Charlie24 DNA MER1_type 2373 2442 -8 3 853 487 296 55 7 chr15 35243579 35243725 -68251249 + RSINE1 SINE B4 13 165 0 3 853 23 33 0 0 chr15 35243807 35243837 -68251137 + AT_rich Low_complexity Low_complexity 1 30 0 3 853 27 62 0 0 chr15 35243882 35243930 -68251044 + AT_rich Low_complexity Low_complexity 1 48 0 3 853 279 0 0 0 chr15 35244337 35244368 -68250606 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 853 284 0 28 0 chr15 35244629 35244665 -68250309 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 853 894 148 28 14 chr15 35245701 35245845 -68249129 - B1_Mur4 SINE Alu -1 149 4 3 853 3593 31 30 9 chr15 35246417 35246844 -68248130 + RLTR10C LTR ERVK 1 436 0 3 853 6550 125 10 7 chr15 35246967 35247968 -68247006 - L1_Mm LINE L1 -961 4922 3914 3 853 4169 112 28 20 chr15 35247968 35248613 -68246361 + Lx LINE L1 6004 6653 -1 3 853 6550 125 10 7 chr15 35248613 35248641 -68246333 - L1_Mm LINE L1 -1970 3913 3891 3 853 466 261 47 47 chr15 35250636 35250785 -68244189 + B1F SINE Alu 1 149 0 3 853 663 214 15 8 chr15 35251392 35251524 -68243450 - B1_Mur3 SINE Alu -15 134 2 3 853 357 277 106 9 chr15 35251625 35251738 -68243236 + PB1 SINE Alu 2 125 -2 3 853 531 260 89 52 chr15 35251829 35252020 -68242954 + B3A SINE B2 1 198 0 3 853 3098 52 39 3 chr15 35252038 35252420 -68242554 - MTA_Mm LTR MaLR 0 396 1 3 853 337 246 40 20 chr15 35252462 35252608 -68242366 - MIRb SINE MIR -65 203 49 3 853 324 0 0 0 chr15 35252930 35252966 -68242008 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 853 696 302 90 8 chr15 35252967 35253211 -68241763 - B4A SINE B4 -28 264 1 3 853 753 247 0 0 chr15 35253245 35253391 -68241583 - B1_Mur3 SINE Alu -1 148 3 3 853 197 330 134 61 chr15 35253435 35254174 -68240800 + L2c LINE L2 2355 3162 -225 3 853 1296 14 0 0 chr15 35254724 35254871 -68240103 - B1_Mm SINE Alu 0 147 1 3 853 24 32 0 0 chr15 35254881 35254912 -68240062 + AT_rich Low_complexity Low_complexity 1 31 0 3 853 324 0 0 0 chr15 35257604 35257640 -68237334 + (T)n Simple_repeat Simple_repeat 1 36 0 3 106 2024 144 75 12 chr15 35258046 35258391 -68236583 - ORR1B2 LTR MaLR 0 367 1 3 854 474 285 155 45 chr15 35258770 35259035 -68235939 + MTEa LTR MaLR 9 302 -77 3 854 575 278 28 42 chr15 35259516 35259730 -68235244 + B4A SINE B4 1 211 -81 3 854 995 81 0 0 chr15 35260099 35260235 -68234739 - L1_Mus2 LINE L1 -1 6565 6430 3 854 485 303 96 27 chr15 35260339 35260485 -68234489 + RSINE1 SINE B4 6 161 -4 3 854 21 82 0 0 chr15 35260560 35260609 -68234365 + AT_rich Low_complexity Low_complexity 1 49 0 3 854 233 128 26 0 chr15 35260840 35260879 -68234095 + MTD LTR MaLR 1 40 -379 3 854 454 112 12 24 chr15 35260880 35260962 -68234012 + MTD LTR MaLR 339 419 0 3 854 249 159 0 0 chr15 35261037 35261081 -68233893 + (CATA)n Simple_repeat Simple_repeat 4 47 0 3 854 30 27 0 0 chr15 35261095 35261132 -68233842 + AT_rich Low_complexity Low_complexity 1 37 0 3 854 1290 74 0 33 chr15 35261214 35261234 -68233740 - B2_Mm1a SINE B2 -18 175 159 3 854 243 0 0 0 chr15 35261234 35261261 -68233713 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 3 854 1290 74 0 33 chr15 35261261 35261421 -68233553 - B2_Mm1a SINE B2 -35 158 1 3 854 612 283 56 0 chr15 35261452 35261650 -68233324 - B3 SINE B2 -6 210 2 3 854 360 169 0 0 chr15 35261833 35261910 -68233064 + CT-rich Low_complexity Low_complexity 4 80 0 3 854 798 276 116 18 chr15 35261953 35262237 -68232737 - Lx8 LINE L1 -201 7272 6961 3 854 378 241 0 0 chr15 35262251 35262334 -68232640 - Lx8 LINE L1 -614 6859 6777 3 854 216 0 0 0 chr15 35262758 35262782 -68232192 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 854 2562 92 8 174 chr15 35263615 35264128 -68230846 - RLTR23 LTR ERV1 -2 428 1 3 854 25 83 0 0 chr15 35264431 35264491 -68230483 + AT_rich Low_complexity Low_complexity 1 60 0 3 854 512 291 75 71 chr15 35264568 35264827 -68230147 + B4A SINE B4 1 265 -27 3 854 252 185 19 0 chr15 35264860 35264914 -68230060 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 854 429 239 17 76 chr15 35264964 35265082 -68229892 - PB1D9 SINE Alu 0 120 10 3 854 719 171 63 14 chr15 35265738 35265880 -68229094 + B1_Mur2 SINE Alu 1 149 0 4 854 202 209 0 23 chr15 35266490 35266534 -68228440 + GA-rich Low_complexity Low_complexity 1 43 0 4 854 285 211 56 0 chr15 35267925 35267996 -68226978 - Charlie9 DNA MER1_type -7 2750 2676 4 854 389 275 133 10 chr15 35268007 35268202 -68226772 - MER112 DNA MER1_type -38 223 5 4 854 916 65 16 0 chr15 35268552 35268676 -68226298 + B1_Mm SINE Alu 18 143 -4 4 854 1998 62 21 21 chr15 35269257 35269537 -68225437 - L1Md_F2 LINE L1 0 6582 6303 4 854 324 0 0 0 chr15 35272133 35272169 -68222805 + (T)n Simple_repeat Simple_repeat 1 36 0 4 854 1148 76 0 0 chr15 35272716 35272861 -68222113 - B1_Mus1 SINE Alu -1 147 3 4 854 484 236 18 124 chr15 35272861 35273030 -68221944 + B3A SINE B2 35 198 0 4 854 348 250 173 48 chr15 35273712 35273880 -68221094 - B3A SINE B2 -9 189 1 4 854 1142 95 0 0 chr15 35273981 35274128 -68220846 - B1_Mus1 SINE Alu 0 148 2 4 854 432 0 0 0 chr15 35274333 35274381 -68220593 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 854 218 262 259 12 chr15 35274402 35274572 -68220402 + L2c LINE L2 3024 3235 -152 4 854 21 0 0 0 chr15 35274691 35274712 -68220262 + AT_rich Low_complexity Low_complexity 1 21 0 4 854 22 35 0 0 chr15 35275606 35275635 -68219339 + AT_rich Low_complexity Low_complexity 1 29 0 4 854 665 276 125 0 chr15 35275688 35275880 -68219094 + ID_B1 SINE B4 8 223 -1 4 854 5017 121 47 82 chr15 35276188 35277738 -68217236 + L1_Mus2 LINE L1 5070 6566 0 4 854 23 0 0 0 chr15 35277798 35277821 -68217153 + AT_rich Low_complexity Low_complexity 1 23 0 4 854 891 261 89 19 chr15 35277875 35278144 -68216830 - B4A SINE B4 0 292 5 4 854 243 0 0 0 chr15 35278157 35278184 -68216790 + (T)n Simple_repeat Simple_repeat 1 27 0 4 854 540 151 22 151 chr15 35279186 35279356 -68215618 - B1F SINE Alu -1 149 14 4 854 858 258 20 15 chr15 35279390 35279413 -68215561 - B3A SINE B2 0 198 175 4 854 360 0 0 0 chr15 35279413 35279453 -68215521 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 854 858 258 20 15 chr15 35279453 35279626 -68215348 - B3A SINE B2 -24 174 2 4 854 293 281 43 24 chr15 35279797 35280012 -68214962 + (TGAG)n Simple_repeat Simple_repeat 1 218 0 4 854 994 78 21 14 chr15 35280374 35280518 -68214456 - B2_Mm2 SINE B2 0 195 51 4 854 24 32 0 0 chr15 35280768 35280799 -68214175 + AT_rich Low_complexity Low_complexity 1 31 0 4 854 382 250 0 0 chr15 35280862 35280934 -68214040 + ID4_ SINE ID 1 72 -11 4 854 270 0 0 0 chr15 35281084 35281114 -68213860 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 854 643 272 6 58 chr15 35281129 35281285 -68213689 - RSINE1 SINE B4 -12 153 6 4 854 1153 69 0 0 chr15 35281745 35281889 -68213085 - B1_Mus2 SINE Alu -3 144 1 4 854 243 243 196 45 chr15 35281910 35282022 -68212952 - L2b LINE L2 -1 3374 3246 4 854 180 0 0 0 chr15 35282223 35282243 -68212731 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 4 854 496 196 0 121 chr15 35282265 35282381 -68212593 - B1_Mur2 SINE Alu -47 102 1 4 854 305 263 113 63 chr15 35282381 35282400 -68212574 - ID_B1 SINE B4 -11 179 65 4 854 246 62 0 0 chr15 35282434 35282466 -68212508 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 854 779 315 131 73 chr15 35283148 35283751 -68211223 - RMER13A LTR ERVK -124 784 101 4 854 6848 67 34 6 chr15 35283989 35285083 -68209891 - L1_Mus2 LINE L1 -1 6565 5442 4 854 1667 10 15 0 chr15 35285083 35285281 -68209693 - MT2_Mm LTR ERVL -292 201 1 4 854 4488 108 8 43 chr15 35285282 35286050 -68208924 + L1_Mm LINE L1 4623 5363 -520 4 854 1361 103 5 0 chr15 35286045 35286249 -68208725 + L1_Mm LINE L1 4781 4985 -898 4 854 2297 148 106 34 chr15 35286407 35286881 -68208093 - RMER6C LTR ERVK -181 509 2 4 854 208 350 100 25 chr15 35287653 35287773 -68207201 + MER5A DNA MER1_type 54 182 -7 4 854 3980 163 189 11 chr15 35287859 35288702 -68206272 + RMER1B Other Other 45 1037 -29 4 854 247 361 74 15 chr15 35288705 35288840 -68206134 - MIR3 SINE MIR -33 175 33 4 854 351 0 0 0 chr15 35289825 35289864 -68205110 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 854 1193 298 127 26 chr15 35290244 35290810 -68204164 - Lx8 LINE L1 -125 7348 6726 4 854 301 292 106 41 chr15 35291101 35291394 -68203580 - L1M4 LINE L1 -1103 5043 4732 4 854 1024 89 44 0 chr15 35291722 35291857 -68203117 + B1_Mus1 SINE Alu 2 142 -6 4 854 186 43 0 0 chr15 35291859 35291882 -68203092 + (TAA)n Simple_repeat Simple_repeat 2 24 0 4 854 267 173 0 0 chr15 35292169 35292250 -68202724 + T-rich Low_complexity Low_complexity 1 81 0 4 854 1668 31 0 0 chr15 35292927 35293119 -68201855 - B2_Mm1a SINE B2 0 193 2 4 854 257 294 32 21 chr15 35293571 35293665 -68201309 - PB1D10 SINE Alu -20 97 3 4 854 581 317 43 9 chr15 35293767 35294131 -68200843 - L1_Mur3 LINE L1 -500 5800 5385 4 854 1184 191 264 37 chr15 35294227 35294560 -68200414 + MT2B LTR ERVL 1 541 -60 4 854 382 191 0 0 chr15 35294578 35294646 -68200328 - MERVL-int LTR ERVL -4808 677 610 4 854 679 204 124 22 chr15 35294656 35294841 -68200133 + MERVL_2A-int LTR ERVL 6 209 -5552 4 854 7470 66 4 5 chr15 35294851 35296122 -68198852 - L1_Mus2 LINE L1 0 6566 5294 4 854 1290 82 28 0 chr15 35296122 35296304 -68198670 - B2_Mm1a SINE B2 -6 187 1 4 854 5001 92 1 20 chr15 35296304 35296479 -68198495 - L1_Mus2 LINE L1 -590 5293 5129 4 854 6730 100 42 0 chr15 35296480 35297547 -68197427 + L1_Mus2 LINE L1 4005 5116 -767 4 854 1366 176 254 11 chr15 35297547 35297988 -68196986 + MERVL_2A-int LTR ERVL 197 744 -5017 4 854 711 179 63 21 chr15 35298025 35298168 -68196806 + B1_Mur4 SINE Alu 2 150 0 4 854 378 218 85 109 chr15 35298189 35298354 -68196620 - MLT1F1 LTR MaLR -27 542 382 4 854 771 266 99 16 chr15 35298382 35298634 -68196340 - MLT1F1 LTR MaLR -287 282 10 4 854 522 107 0 0 chr15 35298678 35298753 -68196221 - MTD LTR MaLR 0 419 345 4 854 651 164 8 0 chr15 35298751 35298873 -68196101 + MTC-int LTR MaLR 50 172 -1086 4 854 501 311 15 15 chr15 35298980 35299114 -68195860 - RSINE1 SINE B4 -31 134 1 4 854 369 0 0 0 chr15 35299254 35299295 -68195679 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 854 353 194 0 0 chr15 35299306 35299378 -68195596 + L1MC LINE L1 3979 4050 -2096 4 854 1326 93 6 0 chr15 35299521 35299703 -68195271 + B2_Mm1t SINE B2 2 184 -9 4 854 243 0 0 0 chr15 35301993 35302020 -68192954 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 854 258 32 0 0 chr15 35302347 35302378 -68192596 + (T)n Simple_repeat Simple_repeat 1 31 0 4 854 453 116 0 0 chr15 35303050 35303119 -68191855 + (TCC)n Simple_repeat Simple_repeat 3 71 0 4 854 621 331 193 16 chr15 35303136 35303649 -68191325 - L1ME3A LINE L1 -316 5857 5254 4 854 908 191 82 0 chr15 35303742 35303936 -68191038 - B3 SINE B2 -6 210 1 4 854 307 186 123 8 chr15 35303939 35304069 -68190905 - L1M4 LINE L1 -3611 2535 2391 4 854 383 38 0 19 chr15 35304105 35304159 -68190815 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 854 384 283 59 166 chr15 35304201 35304472 -68190502 - B4A SINE B4 -8 284 43 4 854 253 200 10 82 chr15 35304558 35304656 -68190318 - L1MEf LINE L1 -3664 3670 3580 4 854 1380 215 160 3 chr15 35304668 35305018 -68189956 + MTD LTR MaLR 15 419 0 4 854 324 265 99 41 chr15 35305025 35305352 -68189622 - L1MEf LINE L1 -3866 3140 2793 4 854 327 324 71 18 chr15 35305397 35305660 -68189314 - RMER15 LTR ERVL 0 575 273 4 854 442 280 52 32 chr15 35305852 35306007 -68188967 - RMER15 LTR ERVL -16 559 402 4 854 970 76 45 8 chr15 35306012 35306144 -68188830 + B1_Mus1 SINE Alu 2 138 -10 4 854 210 71 0 0 chr15 35306161 35306189 -68188785 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 4 854 977 173 62 0 chr15 35306266 35306445 -68188529 + URR1A DNA MER1_type 37 226 0 4 854 307 310 68 37 chr15 35306445 35306471 -68188503 - CYRA11_Mm Unknown Y-chromosome -437 180 149 4 854 243 170 20 41 chr15 35306461 35306510 -68188464 - RMER15 LTR ERVL -176 399 352 4 854 356 284 140 26 chr15 35307226 35307454 -68187520 + MIR SINE MIR 8 261 -1 4 854 236 337 161 11 chr15 35307743 35307929 -68187045 - MIR SINE MIR -47 215 2 4 854 500 160 116 16 chr15 35308913 35309034 -68185940 - BC1_Mm scRNA scRNA -17 135 3 4 854 264 236 18 0 chr15 35308986 35309041 -68185933 - ZP3AR Satellite Satellite -119 93 38 4 854 553 314 13 0 chr15 35309470 35309629 -68185345 - RSINE1 SINE B4 -2 163 3 4 854 302 239 57 0 chr15 35309863 35309951 -68185023 - PB1D10 SINE Alu -1 116 24 4 854 279 175 0 0 chr15 35310169 35310226 -68184748 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 4 854 35287 57 7 6 chr15 35311293 35317429 -68177545 - L1Md_F3 LINE L1 -4 6580 446 4 854 576 168 74 9 chr15 35317615 35317723 -68177251 - PB1D9 SINE Alu -3 117 3 4 854 675 192 39 0 chr15 35318136 35318266 -68176708 - B1_Mur2 SINE Alu -5 144 10 4 854 536 309 35 41 chr15 35319201 35319373 -68175601 - B4A SINE B4 -97 195 25 4 854 565 316 136 36 chr15 35319843 35320074 -68174900 - L1MB5 LINE L1 -69 6105 5838 4 854 1774 185 45 50 chr15 35320074 35320450 -68174524 + ORR1D1 LTR MaLR 1 374 0 4 854 565 316 136 36 chr15 35320450 35320749 -68174225 - L1MB5 LINE L1 -337 5837 5522 4 854 714 116 35 9 chr15 35320765 35320878 -68174096 - RLTR13D3 LTR ERVK 0 1114 999 4 854 27207 69 1 152 chr15 35321005 35325914 -68169060 + L1Md_F2 LINE L1 527 4533 -1350 4 854 5140 51 0 0 chr15 35325914 35326545 -68168429 + L1Md_T LINE L1 5952 6582 0 4 854 27207 62 0 161 chr15 35326545 35327611 -68167363 + L1Md_F2 LINE L1 4534 5586 -297 4 854 7956 53 3 0 chr15 35327612 35328604 -68166370 + L1Md_F2 LINE L1 5588 6582 0 4 854 4438 118 71 20 chr15 35328606 35329464 -68165510 - RLTR13D3 LTR ERVK -104 1010 1 4 854 252 241 54 0 chr15 35329512 35329624 -68165350 - L1MB5 LINE L1 -720 5458 5341 4 854 24 53 0 0 chr15 35329626 35329664 -68165310 + AT_rich Low_complexity Low_complexity 1 38 0 4 854 192 77 0 0 chr15 35329672 35329698 -68165276 + (TCCC)n Simple_repeat Simple_repeat 4 29 0 4 854 533 212 97 0 chr15 35329704 35329817 -68165157 - B1_Mur1 SINE Alu -5 144 21 5 854 2003 115 76 0 chr15 35329854 35330158 -68164816 - ORR1A2 LTR MaLR 0 327 1 5 854 1269 223 72 20 chr15 35330512 35330860 -68164114 - ORR1D2 LTR MaLR 0 370 5 5 854 1690 132 73 20 chr15 35330860 35331178 -68163796 - ORR1A4 LTR MaLR 0 379 1 5 854 1888 140 77 12 chr15 35331254 35331593 -68163381 + ORR1C2 LTR MaLR 1 361 -23 5 854 4448 53 4 0 chr15 35331815 35332362 -68162612 + L1_Mus1 LINE L1 6018 6566 -1 5 854 671 276 7 7 chr15 35333046 35333199 -68161775 - RSINE1 SINE B4 0 165 13 5 854 323 261 169 64 chr15 35333283 35333330 -68161644 - B2_Mm1t SINE B2 -3 190 137 5 854 293 47 0 23 chr15 35333330 35333374 -68161600 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 854 548 212 171 1 chr15 35333374 35333498 -68161476 - B3 SINE B2 -72 144 1 5 854 312 208 108 0 chr15 35333514 35333634 -68161340 - L1MEc LINE L1 -4037 2363 2231 5 854 457 309 187 0 chr15 35333653 35333954 -68161020 + MER44C DNA MER2_type 7 363 -370 5 854 369 302 92 15 chr15 35333970 35334101 -68160873 - B1F1 SINE Alu -7 142 2 5 854 487 288 116 0 chr15 35334197 35334343 -68160631 - MTEb LTR MaLR -2 377 215 5 854 629 265 98 8 chr15 35334580 35334833 -68160141 - MTEb LTR MaLR -113 266 1 5 854 691 326 56 27 chr15 35334879 35334980 -68159994 - B4 SINE B4 0 292 207 5 854 3426 20 2 2 chr15 35334980 35335376 -68159598 - MTA_Mm LTR MaLR 0 396 1 5 854 691 321 64 32 chr15 35335376 35335572 -68159402 - B4 SINE B4 -86 206 1 5 854 497 279 31 6 chr15 35335610 35335769 -68159205 - RSINE1 SINE B4 -2 163 1 5 854 410 259 103 0 chr15 35336897 35337013 -68157961 - B1F1 SINE Alu -8 141 14 5 854 246 335 157 7 chr15 35337325 35337478 -68157496 + MER58A DNA MER1_type 38 213 -11 5 854 26 82 0 0 chr15 35337480 35337541 -68157433 + AT_rich Low_complexity Low_complexity 1 61 0 5 854 2217 203 123 112 chr15 35337685 35338513 -68156461 + RMER17B LTR ERVK 1 837 -121 5 854 3670 50 0 7 chr15 35338601 35339065 -68155909 - RLTR13C2 LTR ERVK -347 461 1 5 854 1142 183 56 0 chr15 35339637 35339850 -68155124 - URR1B DNA MER1_type 0 225 1 5 854 1085 102 0 0 chr15 35340241 35340388 -68154586 - B1_Mus1 SINE Alu 0 148 2 5 854 2679 54 164 140 chr15 35340527 35341026 -68153948 - RLTR1B LTR ERV1 0 512 2 5 854 1696 255 32 45 chr15 35341079 35341571 -68153403 - RMER19C LTR ERVK 0 611 126 5 854 749 219 143 21 chr15 35341894 35342122 -68152852 - B4A SINE B4 -6 286 30 5 854 667 209 83 44 chr15 35342122 35342327 -68152647 + MTD LTR MaLR 1 213 -206 5 854 232 133 0 22 chr15 35342293 35342339 -68152635 + RLTR15 LTR ERVK 315 359 0 5 854 226 296 0 0 chr15 35342339 35342376 -68152598 - MLT1A LTR MaLR -241 133 97 5 854 303 130 0 0 chr15 35342503 35342557 -68152417 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 854 766 190 7 0 chr15 35342562 35342704 -68152270 - B3A SINE B2 -55 143 1 5 854 1042 115 0 0 chr15 35343636 35343784 -68151190 - B1_Mus1 SINE Alu 0 148 1 5 854 296 308 0 55 chr15 35344972 35344998 -68149976 - B4A SINE B4 -2 290 271 5 854 347 0 23 0 chr15 35344998 35345041 -68149933 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 854 349 285 202 39 chr15 35345041 35345245 -68149729 - B4A SINE B4 -22 270 5 5 854 976 203 11 0 chr15 35345279 35345456 -68149518 - B3 SINE B2 -1 215 37 5 854 434 277 30 98 chr15 35345457 35345621 -68149353 - RMER10B LTR ERVL 0 398 246 5 854 445 315 72 22 chr15 35346823 35347099 -68147875 - B4A SINE B4 -1 291 2 5 854 380 200 25 0 chr15 35348981 35349061 -68145913 - B3 SINE B2 -10 206 125 5 854 224 273 18 18 chr15 35349090 35349146 -68145828 - B3 SINE B2 -160 56 1 5 854 243 0 0 0 chr15 35349366 35349393 -68145581 + (TTG)n Simple_repeat Simple_repeat 2 28 0 5 854 194 292 0 0 chr15 35349599 35349647 -68145327 + L4 LINE RTE 1782 1829 -200 5 854 221 146 0 20 chr15 35349680 35349729 -68145245 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 854 262 283 68 39 chr15 35350112 35350215 -68144759 - L1MD2 LINE L1 -6410 137 32 5 854 414 0 0 0 chr15 35350228 35350274 -68144700 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 854 401 325 30 65 chr15 35350742 35350910 -68144064 - RSINE1 SINE B4 0 165 4 5 854 716 285 71 43 chr15 35350979 35351261 -68143713 - B4A SINE B4 -1 291 2 5 854 362 295 0 0 chr15 35351287 35351365 -68143609 - B1_Mur1 SINE Alu -22 127 50 5 854 321 298 106 0 chr15 35351659 35351763 -68143211 - PB1 SINE Alu -7 120 6 5 854 425 323 30 0 chr15 35353534 35353667 -68141307 - B1F SINE Alu -10 139 3 5 854 278 342 119 6 chr15 35353994 35354153 -68140821 - MIR3 SINE MIR -7 201 25 5 854 4176 230 50 48 chr15 35354256 35355342 -68139632 - Lx6 LINE L1 -1 7459 6372 5 854 306 0 0 0 chr15 35355624 35355658 -68139316 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 854 279 345 0 26 chr15 35355674 35355787 -68139187 - PB1D10 SINE Alu -7 110 1 5 854 1247 122 16 0 chr15 35355941 35356130 -68138844 - B2_Mm2 SINE B2 -1 194 3 5 854 3664 158 77 12 chr15 35356615 35357300 -68137674 - Lx4A LINE L1 0 7058 6329 5 854 3201 95 12 0 chr15 35357300 35357732 -68137242 - L1_Mm LINE L1 -33 5850 5414 5 854 916 126 0 0 chr15 35357725 35357860 -68137114 - Lx4A LINE L1 -706 6352 6218 5 854 280 352 19 9 chr15 35358497 35358603 -68136371 + PB1D10 SINE Alu 1 107 -10 5 854 1116 62 0 33 chr15 35358955 35359105 -68135869 - B1_Mus2 SINE Alu -2 145 1 5 854 283 312 44 25 chr15 35360117 35360293 -68134681 - L1M5 LINE L1 -618 5544 5363 5 854 3325 92 52 8 chr15 35360294 35360799 -68134175 - Lx3A LINE L1 -346 6635 6109 5 854 35 0 0 0 chr15 35361022 35361057 -68133917 + AT_rich Low_complexity Low_complexity 1 35 0 5 854 234 91 0 0 chr15 35361115 35361148 -68133826 + (T)n Simple_repeat Simple_repeat 1 33 0 5 854 34083 80 14 3 chr15 35361173 35367297 -68127677 - L1Md_F2 LINE L1 0 6582 387 5 854 339 275 133 12 chr15 35367507 35367680 -68127294 - L1MEc LINE L1 -5138 1262 1069 5 854 26 0 0 0 chr15 35367835 35367861 -68127113 + AT_rich Low_complexity Low_complexity 1 26 0 5 854 289 241 234 0 chr15 35367974 35368115 -68126859 - L1MEc LINE L1 -5566 834 661 5 854 302 348 38 16 chr15 35368155 35368339 -68126635 - L1MEc LINE L1 -6096 304 117 5 854 24 53 0 0 chr15 35368411 35368449 -68126525 + AT_rich Low_complexity Low_complexity 1 38 0 5 854 304 244 178 30 chr15 35369042 35369211 -68125763 + B3A SINE B2 5 198 0 5 854 250 318 0 0 chr15 35369241 35369329 -68125645 - L1M2 LINE L1 -747 5565 5478 5 854 207 100 0 0 chr15 35369330 35369360 -68125614 + (T)n Simple_repeat Simple_repeat 1 30 0 5 854 1160 75 0 0 chr15 35369360 35369506 -68125468 - B1_Mus2 SINE Alu 0 147 2 5 854 234 236 11 22 chr15 35369512 35369550 -68125424 + T-rich Low_complexity Low_complexity 54 91 0 5 854 763 279 30 0 chr15 35369550 35369751 -68125223 - B3 SINE B2 -6 210 4 5 854 234 236 11 22 chr15 35369751 35369803 -68125171 + T-rich Low_complexity Low_complexity 2 53 0 5 854 8526 106 32 18 chr15 35369809 35371327 -68123647 - Lx3B LINE L1 -4 6969 5430 5 854 2066 73 13 7 chr15 35371325 35371628 -68123346 + Lx3B LINE L1 5038 5342 -544 5 854 712 88 80 2 chr15 35371630 35371757 -68123217 + L1_Mur1 LINE L1 5273 5433 -1011 5 854 544 301 0 22 chr15 35372126 35372265 -68122709 - ID_B1 SINE B4 -4 220 85 5 854 33 0 0 0 chr15 35372265 35372298 -68122676 + AT_rich Low_complexity Low_complexity 1 33 0 5 854 235 334 251 17 chr15 35372333 35372695 -68122279 - L2a LINE L2 -12 3414 2968 5 854 767 92 591 8 chr15 35373143 35373393 -68121581 + L1_Mus4 LINE L1 6239 6634 -2 5 854 217 227 121 0 chr15 35374573 35374639 -68120335 + B1_Mur1 SINE Alu 74 147 -2 5 854 183 100 0 0 chr15 35376286 35376316 -68118658 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 5 854 26 30 0 0 chr15 35376952 35376985 -68117989 + AT_rich Low_complexity Low_complexity 1 33 0 5 854 21 57 0 0 chr15 35377788 35377823 -68117151 + AT_rich Low_complexity Low_complexity 1 35 0 5 854 30 27 0 0 chr15 35378496 35378533 -68116441 + AT_rich Low_complexity Low_complexity 1 37 0 5 854 3735 76 25 15 chr15 35378667 35379190 -68115784 - L1_Mus2 LINE L1 0 6566 6039 5 854 312 274 73 28 chr15 35379400 35379509 -68115465 - B3 SINE B2 -97 119 6 5 854 205 237 0 0 chr15 35379573 35379611 -68115363 + (TCCG)n Simple_repeat Simple_repeat 3 40 0 5 854 618 14 0 0 chr15 35379614 35379685 -68115289 + (TCCC)n Simple_repeat Simple_repeat 4 74 0 5 854 368 262 114 45 chr15 35379685 35379728 -68115246 - B1_Mur1 SINE Alu -8 141 95 5 854 2613 158 48 33 chr15 35379728 35380245 -68114729 - RLTR11A LTR ERVK 0 528 4 5 854 368 262 114 45 chr15 35380245 35380333 -68114641 - B1_Mur1 SINE Alu -55 94 1 5 854 36 53 0 0 chr15 35380454 35380511 -68114463 + AT_rich Low_complexity Low_complexity 1 57 0 5 854 26 50 0 0 chr15 35380596 35380636 -68114338 + AT_rich Low_complexity Low_complexity 1 40 0 5 854 276 237 103 26 chr15 35380972 35381050 -68113924 + MER58B DNA MER1_type 255 338 -3 5 854 769 206 62 17 chr15 35381300 35381466 -68113508 + B3 SINE B2 50 210 -6 5 854 22 0 0 0 chr15 35381639 35381661 -68113313 + AT_rich Low_complexity Low_complexity 1 22 0 5 854 439 294 12 48 chr15 35382398 35382566 -68112408 - RSINE1 SINE B4 -1 164 3 5 854 325 276 48 16 chr15 35383120 35383245 -68111729 + L1MCa LINE L1 1087 1215 -5293 5 854 834 239 50 5 chr15 35383317 35383515 -68111459 + B3 SINE B2 5 211 -5 5 854 517 191 0 0 chr15 35383583 35383672 -68111302 + B1_Mur3 SINE Alu 61 149 0 5 854 1935 168 17 23 chr15 35385416 35385764 -68109210 - RMER4B LTR ERVK -239 346 1 5 854 331 114 0 81 chr15 35385790 35385876 -68109098 + (TAAA)n Simple_repeat Simple_repeat 2 80 0 6 854 240 392 74 8 chr15 35385935 35386056 -68108918 - RSINE1 SINE B4 -36 129 1 6 854 22 35 0 0 chr15 35386662 35386691 -68108283 + AT_rich Low_complexity Low_complexity 1 29 0 6 854 454 113 0 14 chr15 35387147 35387219 -68107755 + U4 snRNA snRNA 1 71 -74 6 854 21 0 0 0 chr15 35387396 35387417 -68107557 + AT_rich Low_complexity Low_complexity 1 21 0 6 854 537 146 106 10 chr15 35387849 35387953 -68107021 + B1_Mur1 SINE Alu 34 147 -2 6 854 1661 294 37 33 chr15 35388202 35388283 -68106691 - RMER15-int LTR ERVL -3507 1492 1417 6 854 658 291 160 13 chr15 35388283 35388596 -68106378 - ORR1E LTR MaLR 0 359 1 6 854 1661 294 37 33 chr15 35388596 35389059 -68105915 - RMER15-int LTR ERVL -3583 1416 946 6 854 627 31 31 10 chr15 35389163 35389309 -68105665 - L1Md_T LINE L1 0 6582 6475 6 854 251 278 58 58 chr15 35389312 35389415 -68105559 - RMER15-int LTR ERVL -4170 829 727 6 855 383 253 34 11 chr15 35389543 35389631 -68105343 - RMER4B LTR ERVK -150 435 346 6 855 1068 195 126 46 chr15 35389633 35389896 -68105078 - RodERV21-int LTR ERV1 -168 4823 4540 6 855 1559 135 37 24 chr15 35389897 35390193 -68104781 + RMER17A LTR ERVK 444 743 -8 6 855 2092 192 52 39 chr15 35390346 35390440 -68104534 + MTC LTR MaLR 3 113 -308 6 855 1329 99 109 0 chr15 35390440 35390641 -68104333 + URR1B DNA MER1_type 3 225 0 6 855 2092 192 52 39 chr15 35390641 35390952 -68104022 + MTC LTR MaLR 114 413 -8 6 855 30 59 0 0 chr15 35391409 35391460 -68103514 + AT_rich Low_complexity Low_complexity 1 51 0 6 855 937 268 9 14 chr15 35391574 35391786 -68103188 + MTE2b LTR MaLR 6 216 -163 6 855 4692 85 63 7 chr15 35391823 35392501 -68102473 - Lx LINE L1 -2 6652 5937 6 855 734 231 186 22 chr15 35392793 35393068 -68101906 - ORR1D2 LTR MaLR -52 322 3 6 855 3323 227 151 86 chr15 35393070 35394356 -68100618 - ORR1D2-int LTR MaLR 0 1370 2 6 855 719 254 57 26 chr15 35394356 35394550 -68100424 - ORR1D2 LTR MaLR -2 368 169 6 855 874 277 216 45 chr15 35394567 35395392 -68099582 - L1_Mur3 LINE L1 -3617 2263 1322 6 855 450 0 0 0 chr15 35395398 35395448 -68099526 + (TTTA)n Simple_repeat Simple_repeat 4 53 0 6 855 936 101 6 97 chr15 35395452 35395617 -68099357 - B2_Mm2 SINE B2 -44 151 2 6 855 243 185 0 47 chr15 35395706 35395791 -68099183 + CT-rich Low_complexity Low_complexity 1 81 0 6 855 206 242 0 15 chr15 35395792 35395830 -68099144 + polypyrimidine Low_complexity Low_complexity 30 67 0 6 855 906 145 7 0 chr15 35395830 35395975 -68098999 - B1_Mur4 SINE Alu 0 150 5 6 855 206 242 0 15 chr15 35395975 35396003 -68098971 + polypyrimidine Low_complexity Low_complexity 2 29 0 6 855 448 225 64 11 chr15 35396218 35396394 -68098580 - L1M3 LINE L1 -807 5493 5315 6 855 773 154 285 72 chr15 35396603 35396965 -68098009 - RMER6B LTR ERVK -3 458 20 6 855 371 247 10 30 chr15 35397222 35397322 -68097652 - MLT1A0 LTR MaLR 0 365 268 6 855 2826 122 42 0 chr15 35397333 35397758 -68097216 - BGLII_A LTR ERVK 0 445 3 6 855 3061 176 87 74 chr15 35397760 35398635 -68096339 - MYSERV16_I-int LTR ERVK 0 2326 1441 6 855 329 130 14 42 chr15 35398631 35398703 -68096271 - MYSERV16_I-int LTR ERVK -2501 341 272 6 855 34 24 0 0 chr15 35398867 35398908 -68096066 + AT_rich Low_complexity Low_complexity 1 41 0 6 855 25 31 0 0 chr15 35399854 35399886 -68095088 + AT_rich Low_complexity Low_complexity 1 32 0 6 855 1054 36 51 0 chr15 35399908 35400046 -68094928 + B1_Mus2 SINE Alu 2 146 -1 6 855 333 47 0 0 chr15 35400069 35400112 -68094862 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 855 216 0 0 0 chr15 35400361 35400385 -68094589 + (T)n Simple_repeat Simple_repeat 1 24 0 6 855 300 264 45 36 chr15 35401090 35401200 -68093774 - L1MB7 LINE L1 -43 6141 6031 6 855 705 281 149 24 chr15 35401211 35401466 -68093508 + B4A SINE B4 6 292 0 6 855 320 280 122 25 chr15 35401863 35402301 -68092673 - L1_Mur3 LINE L1 -2461 3386 2886 6 855 295 236 69 33 chr15 35402619 35402719 -68092255 - B1F2 SINE Alu -39 110 6 6 855 254 242 0 43 chr15 35402658 35402727 -68092247 - B4A SINE B4 -144 148 83 6 855 784 191 0 7 chr15 35402809 35402951 -68092023 + B1_Mus1 SINE Alu 2 142 -6 6 855 873 148 224 0 chr15 35403082 35403305 -68091669 - Lx9 LINE L1 -1 7643 7371 6 855 1192 27 7 0 chr15 35404471 35404617 -68090357 + B1_Mus2 SINE Alu 1 147 0 6 855 396 0 0 0 chr15 35404857 35404901 -68090073 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 855 1468 201 37 31 chr15 35404986 35405086 -68089888 - RLTR20C LTR ERVK 0 534 433 6 855 345 102 0 0 chr15 35405086 35405145 -68089829 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 855 363 44 0 0 chr15 35405145 35405189 -68089785 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 855 429 20 0 0 chr15 35405189 35405238 -68089736 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 855 1468 169 193 18 chr15 35405238 35405606 -68089368 - RLTR20C LTR ERVK -102 432 1 6 855 235 289 69 17 chr15 35405609 35405725 -68089249 - L1M4 LINE L1 -249 5929 5808 6 855 991 232 10 0 chr15 35405977 35406184 -68088790 - B3 SINE B2 -4 212 4 6 855 38 61 0 0 chr15 35406291 35406357 -68088617 + AT_rich Low_complexity Low_complexity 1 66 0 6 855 679 262 170 24 chr15 35406364 35406822 -68088152 - L1M4 LINE L1 -381 5793 5269 6 855 2341 88 3 0 chr15 35406890 35407208 -68087766 - ORR1A2 LTR MaLR -8 319 1 6 855 396 0 0 0 chr15 35408386 35408430 -68086544 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 855 506 248 142 0 chr15 35408933 35409074 -68085900 - MTD LTR MaLR -2 417 257 6 855 483 82 11 66 chr15 35409062 35409153 -68085821 - MTD LTR MaLR -333 88 3 6 855 288 53 0 0 chr15 35409267 35409305 -68085669 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 6 855 3682 174 106 64 chr15 35409604 35410452 -68084522 - RMER19B LTR ERVK -18 884 1 6 855 1200 103 21 26 chr15 35411068 35411257 -68083717 - B2_Mm2 SINE B2 -7 188 1 6 855 518 0 16 0 chr15 35412420 35412482 -68082492 + (TTTA)n Simple_repeat Simple_repeat 3 65 0 6 855 654 331 12 62 chr15 35412549 35412807 -68082167 - B4A SINE B4 -43 249 5 6 855 1051 269 154 7 chr15 35412846 35413145 -68081829 - ORR1D2 LTR MaLR -2 368 26 6 855 420 55 0 0 chr15 35413147 35413202 -68081772 + (CATA)n Simple_repeat Simple_repeat 1 55 0 6 855 186 71 0 0 chr15 35413467 35413495 -68081479 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 855 1123 62 0 0 chr15 35413512 35413657 -68081317 + B1_Mus1 SINE Alu 2 146 -2 6 855 26 0 0 0 chr15 35413657 35413683 -68081291 + AT_rich Low_complexity Low_complexity 1 26 0 6 855 244 333 50 20 chr15 35414202 35414303 -68080671 - MLT1A LTR MaLR -23 351 248 6 855 317 286 101 54 chr15 35414408 35414556 -68080418 - HAL1-3A_ME LINE L1 -420 2438 2284 6 855 746 217 0 0 chr15 35415512 35415641 -68079333 + B3 SINE B2 2 130 -86 6 855 380 284 113 26 chr15 35415818 35416013 -68078961 - L1M4 LINE L1 -1975 4171 3960 6 855 2165 66 0 23 chr15 35416798 35417108 -68077866 - L1Md_F2 LINE L1 0 6582 6280 6 855 1657 260 114 24 chr15 35417611 35418433 -68076541 + RMER1B Other Other 17 683 -383 6 855 411 189 0 0 chr15 35418444 35418518 -68076456 + RMER1A Other Other 715 788 -242 6 855 244 303 39 39 chr15 35418676 35418779 -68076195 - PB1D9 SINE Alu -15 105 3 6 855 27 49 0 0 chr15 35419088 35419129 -68075845 + AT_rich Low_complexity Low_complexity 1 41 0 6 855 201 39 0 0 chr15 35419140 35419166 -68075808 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 855 504 291 40 20 chr15 35419172 35419323 -68075651 - B3A SINE B2 -44 154 1 6 855 495 0 0 0 chr15 35419956 35420011 -68074963 + (GGA)n Simple_repeat Simple_repeat 2 56 0 6 855 684 315 62 25 chr15 35420492 35420733 -68074241 - MER68 LTR ERVL -284 279 30 6 855 327 308 35 56 chr15 35420835 35421009 -68073965 - B4A SINE B4 -73 151 1 6 855 3395 20 13 0 chr15 35421221 35421612 -68073362 - MTA_Mm LTR MaLR 0 396 1 6 855 576 0 0 0 chr15 35421835 35421899 -68073075 + (TTTTC)n Simple_repeat Simple_repeat 2 65 0 6 855 3756 74 2 10 chr15 35421903 35422409 -68072565 - L1Md_F2 LINE L1 -19 6563 6062 6 855 321 135 0 0 chr15 35422420 35422472 -68072502 + (TC)n Simple_repeat Simple_repeat 2 53 0 6 855 308 239 38 132 chr15 35422476 35422582 -68072392 - PB1D10 SINE Alu -9 108 13 6 855 365 298 67 101 chr15 35422859 35423187 -68071787 + MER33 DNA MER1_type 7 323 -1 6 855 5460 80 40 5 chr15 35423323 35424092 -68070882 - L1_Mus3 LINE L1 -2 6636 5841 6 855 288 362 70 48 chr15 35424093 35424406 -68070568 - ORR1D1 LTR MaLR -29 345 26 6 855 350 151 14 0 chr15 35424572 35424645 -68070329 + (CAA)n Simple_repeat Simple_repeat 3 76 0 6 855 322 212 61 0 chr15 35424655 35424721 -68070253 + MER58C DNA MER1_type 140 209 -6 6 855 3059 218 143 47 chr15 35425432 35426361 -68068613 - RMER1B Other Other -2 1064 47 6 855 199 353 16 48 chr15 35427229 35427354 -68067620 - MIRb SINE MIR -2 266 146 6 855 1772 156 111 43 chr15 35427359 35427728 -68067246 + ORR1B1 LTR MaLR 1 394 0 6 855 207 88 0 0 chr15 35429497 35429531 -68065443 + (T)n Simple_repeat Simple_repeat 1 34 0 6 855 213 121 0 0 chr15 35431041 35431074 -68063900 + (T)n Simple_repeat Simple_repeat 1 33 0 6 855 549 80 0 0 chr15 35431780 35431855 -68063119 + (TCCC)n Simple_repeat Simple_repeat 4 78 0 6 855 261 244 15 39 chr15 35432097 35432302 -68062672 + RMER17D LTR ERVK 244 443 -446 6 855 818 158 4 3 chr15 35432660 35432805 -68062169 - L1_Mur2 LINE L1 -576 5604 5427 6 855 10473 166 72 10 chr15 35432802 35434948 -68060026 - L1_Mur2 LINE L1 -1168 4709 2431 6 855 4634 189 30 57 chr15 35434950 35435959 -68059015 - Lx5 LINE L1 -279 6771 5790 6 855 467 322 27 16 chr15 35436041 35436227 -68058747 - B4A SINE B4 -36 256 69 6 855 1534 43 0 5 chr15 35436572 35436758 -68058216 + B2_Mm1t SINE B2 2 186 -7 6 855 22 0 0 0 chr15 35437043 35437065 -68057909 + AT_rich Low_complexity Low_complexity 1 22 0 6 855 8089 76 28 25 chr15 35437144 35438359 -68056615 - Lx3_Mus LINE L1 -8 7001 5783 6 855 7856 58 4 2 chr15 35438372 35439402 -68055572 - L1_Mus2 LINE L1 -2 6564 5533 7 855 4847 92 26 3 chr15 35439398 35440093 -68054881 + L1_Mus2 LINE L1 4816 5526 -357 7 855 1412 81 11 0 chr15 35440095 35440281 -68054693 - Lx3_Mus LINE L1 -1216 5793 5606 6 855 207 0 0 0 chr15 35440389 35440412 -68054562 + (T)n Simple_repeat Simple_repeat 1 23 0 7 855 644 279 12 24 chr15 35440416 35440581 -68054393 - RSINE1 SINE B4 0 165 3 7 855 40 0 0 0 chr15 35440604 35440644 -68054330 + AT_rich Low_complexity Low_complexity 1 40 0 7 855 27 29 0 0 chr15 35440947 35440981 -68053993 + AT_rich Low_complexity Low_complexity 1 34 0 7 855 862 290 166 7 chr15 35441049 35441452 -68053522 - Lx8 LINE L1 -97 7376 6910 7 855 704 294 39 29 chr15 35441902 35442109 -68052865 + B3 SINE B2 7 215 -1 7 855 26 30 0 0 chr15 35443231 35443264 -68051710 + AT_rich Low_complexity Low_complexity 1 33 0 7 855 647 187 42 56 chr15 35446601 35446743 -68048231 - B1_Mus2 SINE Alu -5 142 3 7 855 225 0 0 0 chr15 35446975 35447000 -68047974 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 7 855 26 88 0 0 chr15 35447110 35447178 -68047796 + AT_rich Low_complexity Low_complexity 1 68 0 7 855 21 57 0 0 chr15 35447287 35447322 -68047652 + AT_rich Low_complexity Low_complexity 1 35 0 7 855 384 97 0 0 chr15 35447478 35447540 -68047434 + (TG)n Simple_repeat Simple_repeat 1 62 0 7 855 678 321 35 32 chr15 35447559 35447842 -68047132 - B4A SINE B4 -7 285 2 7 855 192 97 0 0 chr15 35447853 35447884 -68047090 + (CCA)n Simple_repeat Simple_repeat 1 31 0 7 855 4654 147 67 18 chr15 35449587 35450425 -68044549 - Lx2 LINE L1 -1 6996 6118 7 855 247 143 48 0 chr15 35450426 35450489 -68044485 + Lx2B LINE L1 6050 6115 -885 7 855 192 125 0 0 chr15 35450829 35450861 -68044113 + (TCCC)n Simple_repeat Simple_repeat 1 32 0 7 855 287 172 17 0 chr15 35450902 35450960 -68044014 - L1MB5 LINE L1 -204 5970 5912 7 855 312 290 67 26 chr15 35451076 35451345 -68043629 - L1MD LINE L1 -694 5665 5386 7 855 342 302 121 30 chr15 35451452 35451650 -68043324 - L1MD LINE L1 -759 5387 5172 7 855 1431 103 52 30 chr15 35451657 35451887 -68043087 - L1Md_F2 LINE L1 -14 6568 6334 7 855 294 291 116 6 chr15 35452011 35452184 -68042790 - L1MD LINE L1 -3113 3033 2842 7 855 243 282 99 0 chr15 35452426 35452557 -68042417 - L1MD LINE L1 -3595 2551 2408 7 855 225 230 106 39 chr15 35452593 35452697 -68042277 + L1MA6 LINE L1 6034 6144 -156 7 855 405 219 63 8 chr15 35452798 35452943 -68042031 + L1MA6 LINE L1 6142 6295 -5 7 855 339 268 57 6 chr15 35452960 35453118 -68041856 + L1M2 LINE L1 4993 5158 -985 7 855 2195 172 26 3 chr15 35453336 35453721 -68041253 - ORR1B1 LTR MaLR 0 394 1 7 855 555 231 65 24 chr15 35453794 35453918 -68041056 - B1_Mur1 SINE Alu -8 141 13 7 855 316 241 174 6 chr15 35454081 35454248 -68040726 - Lx9 LINE L1 0 7644 7450 7 855 817 203 188 29 chr15 35454334 35454573 -68040401 - RMER20B LTR ERVK -222 405 129 7 855 632 275 18 23 chr15 35454789 35454960 -68040014 - B3A SINE B2 -2 196 27 7 855 5186 58 9 3 chr15 35455019 35455688 -68039286 - L1_Mus1 LINE L1 -3 6564 5892 7 855 181 319 111 0 chr15 35455785 35455857 -68039117 + L2a LINE L2 3347 3426 0 7 855 1323 278 76 5 chr15 35455961 35456381 -68038593 - Lx8 LINE L1 0 7473 7024 7 855 339 353 7 0 chr15 35456427 35456563 -68038411 - Lx8 LINE L1 -553 6920 6784 7 855 213 121 0 0 chr15 35456747 35456780 -68038194 + (GGA)n Simple_repeat Simple_repeat 2 34 0 7 855 629 107 162 12 chr15 35457638 35457762 -68037212 + B2_Mm2 SINE B2 46 176 -19 7 855 23 33 0 0 chr15 35457881 35457911 -68037063 + AT_rich Low_complexity Low_complexity 1 30 0 7 855 1045 208 5 5 chr15 35457973 35458171 -68036803 - B3 SINE B2 -18 198 1 7 855 705 269 81 6 chr15 35458293 35458465 -68036509 - B3A SINE B2 -12 186 2 7 855 546 335 84 42 chr15 35458466 35458824 -68036150 - MLT1D LTR MaLR -55 450 78 7 855 212 0 36 0 chr15 35459197 35459225 -68035749 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 7 855 628 287 117 98 chr15 35459371 35459738 -68035236 - MTE2a LTR MaLR 0 379 6 7 855 286 276 79 36 chr15 35459753 35459892 -68035082 - HAL1 LINE L1 -894 1613 1469 7 855 320 333 0 62 chr15 35460424 35460536 -68034438 - B4A SINE B4 0 292 188 7 855 1385 213 138 53 chr15 35461137 35461514 -68033460 - MTD LTR MaLR -10 409 1 7 855 834 56 0 0 chr15 35461570 35461678 -68033296 + (TCCC)n Simple_repeat Simple_repeat 2 109 0 7 855 231 286 0 0 chr15 35461679 35461756 -68033218 + CT-rich Low_complexity Low_complexity 14 90 0 7 855 230 356 164 14 chr15 35462005 35462224 -68032750 + MIRb SINE MIR 9 260 -8 7 855 21 0 0 0 chr15 35462993 35463014 -68031960 + AT_rich Low_complexity Low_complexity 1 21 0 7 855 636 200 0 0 chr15 35464340 35464485 -68030489 + (TG)n Simple_repeat Simple_repeat 2 146 0 7 855 331 361 63 8 chr15 35465184 35465452 -68029522 + L1M2 LINE L1 4751 5033 -1110 7 855 240 296 76 57 chr15 35465596 35465807 -68029167 + L1M2 LINE L1 5112 5326 -817 7 855 23 0 0 0 chr15 35467750 35467773 -68027201 + AT_rich Low_complexity Low_complexity 1 23 0 7 855 1639 200 101 8 chr15 35468048 35468416 -68026558 - Lx7 LINE L1 -554 7142 6741 7 855 583 227 75 68 chr15 35468410 35468808 -68026166 + Lx7 LINE L1 7255 7690 -6 7 855 22 35 0 0 chr15 35469022 35469051 -68025923 + AT_rich Low_complexity Low_complexity 1 29 0 7 855 657 0 0 0 chr15 35469317 35469390 -68025584 + (TTCC)n Simple_repeat Simple_repeat 2 74 0 7 855 995 278 82 0 chr15 35469399 35469741 -68025233 + ORR1D2 LTR MaLR 1 370 0 7 855 263 262 2 16 chr15 35469741 35469810 -68025164 - PB1D10 SINE Alu -45 104 34 7 855 360 0 0 0 chr15 35471101 35471141 -68023833 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 855 291 326 48 34 chr15 35471480 35471626 -68023348 - B1F1 SINE Alu 0 149 2 7 855 1499 59 0 0 chr15 35472711 35472897 -68022077 + B2_Mm1t SINE B2 1 186 -7 7 855 498 279 93 114 chr15 35473146 35473435 -68021539 - LTR37A LTR ERV1 -3 423 111 7 855 294 50 0 0 chr15 35473435 35473475 -68021499 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 855 498 279 93 114 chr15 35473475 35473614 -68021360 - LTR37A LTR ERV1 -316 110 4 7 855 28 0 0 0 chr15 35473882 35473910 -68021064 + AT_rich Low_complexity Low_complexity 1 28 0 7 855 450 244 88 15 chr15 35474417 35474554 -68020420 - B1_Mur1 SINE Alu -2 147 1 7 855 612 309 6 11 chr15 35474695 35474878 -68020096 + B3A SINE B2 2 183 -15 7 855 385 192 0 0 chr15 35475195 35475268 -68019706 - MTEb LTR MaLR -12 367 295 7 855 448 276 112 25 chr15 35475311 35475471 -68019503 + MTEa LTR MaLR 104 277 -102 7 855 285 258 97 0 chr15 35475584 35475677 -68019297 + Tigger5 DNA MER2_type 2305 2406 0 7 855 282 318 45 0 chr15 35475964 35476074 -68018900 + MamRep1161 DNA TcMar 553 667 -290 7 855 778 260 25 0 chr15 35476172 35476368 -68018606 - B3 SINE B2 -15 201 1 7 855 528 126 69 0 chr15 35477330 35477417 -68017557 - L1_Mur2 LINE L1 -1121 4756 4664 7 855 1787 141 34 9 chr15 35477401 35477724 -68017250 - L1_Mus3 LINE L1 -1853 4033 3703 7 855 4804 150 32 19 chr15 35477705 35478985 -68015989 - L1_Mus3 LINE L1 -4 6637 5338 7 855 15518 124 22 24 chr15 35478972 35481686 -68013288 - L1_Mus3 LINE L1 -1690 4196 1487 7 855 2143 199 15 39 chr15 35481684 35482225 -68012749 - L1_Mus3 LINE L1 -5476 1143 486 7 855 357 243 18 36 chr15 35482242 35482353 -68012621 - L1_Mus3 LINE L1 -5838 781 673 7 855 243 190 16 65 chr15 35482382 35482444 -68012530 - L1Md_F LINE L1 -5776 743 685 7 855 373 254 2 9 chr15 35482457 35482567 -68012407 - L1VL2 LINE L1 -6150 268 179 7 855 903 173 71 30 chr15 35482609 35482806 -68012168 + L1_Rod LINE L1 5477 5681 -166 7 855 519 226 16 99 chr15 35482809 35482991 -68011983 - MT2B LTR ERVL -91 510 344 7 855 252 362 52 39 chr15 35483089 35483244 -68011730 + MIR SINE MIR 73 229 -33 7 855 1912 35 0 0 chr15 35483482 35483714 -68011260 - L1Md_A LINE L1 0 6582 6351 7 855 6492 19 0 0 chr15 35483714 35484700 -68010274 + L1Md_T LINE L1 5355 6340 -242 7 855 244 252 145 18 chr15 35485485 35485585 -68009389 + B1F2 SINE Alu 1 107 -42 7 855 339 25 0 0 chr15 35487254 35487294 -68007680 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 855 678 316 88 39 chr15 35487356 35487858 -68007116 - MT2A LTR ERVL 0 533 62 7 855 21 0 0 0 chr15 35488413 35488434 -68006540 + AT_rich Low_complexity Low_complexity 1 21 0 7 855 192 257 149 0 chr15 35489010 35489084 -68005890 + L3b LINE CR1 209 293 -189 7 855 963 152 70 5 chr15 35489522 35489707 -68005267 + MTC LTR MaLR 1 197 -224 7 855 329 200 0 15 chr15 35489703 35489769 -68005205 + MTC LTR MaLR 347 411 -8 7 855 1840 215 141 43 chr15 35489939 35490562 -68004412 + L1_Rod LINE L1 3828 4511 -1336 7 855 312 200 14 0 chr15 35490736 35490806 -68004168 - B3A SINE B2 -127 71 1 7 855 21 0 0 0 chr15 35492092 35492113 -68002861 + AT_rich Low_complexity Low_complexity 1 21 0 7 855 261 0 0 0 chr15 35492196 35492225 -68002749 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 855 321 89 0 0 chr15 35493065 35493110 -68001864 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 855 2419 212 49 11 chr15 35494165 35494694 -68000280 - Lx2B LINE L1 0 7000 6452 7 855 2911 117 30 27 chr15 35494706 35495180 -67999794 - Lx LINE L1 0 6654 6180 7 855 2805 112 32 0 chr15 35495188 35495589 -67999385 + L1_Mm LINE L1 5340 5753 -130 7 855 24 0 0 0 chr15 35496857 35496881 -67998093 + AT_rich Low_complexity Low_complexity 1 24 0 7 855 9857 67 4 11 chr15 35497001 35498997 -67995977 - L1Md_F2 LINE L1 -1 6581 4601 7 855 21 0 0 0 chr15 35499007 35499028 -67995946 + AT_rich Low_complexity Low_complexity 1 21 0 7 855 330 220 3 9 chr15 35499161 35499243 -67995731 + MTD LTR MaLR 25 104 -317 7 855 240 111 0 0 chr15 35499633 35499669 -67995305 + (GAA)n Simple_repeat Simple_repeat 1 36 0 7 855 28 61 0 0 chr15 35500182 35500231 -67994743 + AT_rich Low_complexity Low_complexity 1 49 0 1 855 547 355 63 17 chr15 35500368 35500606 -67994368 + B4A SINE B4 44 292 0 2 855 426 20 0 0 chr15 35500774 35500825 -67994149 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 855 25 31 0 0 chr15 35501399 35501431 -67993543 + AT_rich Low_complexity Low_complexity 1 32 0 4 855 228 265 71 71 chr15 35501633 35501759 -67993215 - L1M4 LINE L1 -586 5592 5467 5 855 3012 160 30 9 chr15 35502610 35503437 -67991537 - L1VL4 LINE L1 -2420 1139 292 6 855 27 62 0 0 chr15 35504265 35504313 -67990661 + AT_rich Low_complexity Low_complexity 1 48 0 7 855 356 300 159 40 chr15 35504322 35504624 -67990350 - MER2 DNA MER2_type -3 342 5 8 855 7285 90 26 2 chr15 35504809 35505983 -67988991 - L1_Mus4 LINE L1 -12 6624 5422 9 855 422 209 0 0 chr15 35505986 35506072 -67988902 + 4.5SRNA scRNA scRNA 1 86 -8 1 855 23 54 0 0 chr15 35506439 35506476 -67988498 + AT_rich Low_complexity Low_complexity 1 37 0 1 855 883 260 179 6 chr15 35506768 35507093 -67987881 - Lx6 LINE L1 -4 7456 7076 1 855 231 114 0 0 chr15 35507097 35507132 -67987842 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 855 249 108 0 0 chr15 35507583 35507620 -67987354 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 855 596 97 0 11 chr15 35508308 35508402 -67986572 + (CCA)n Simple_repeat Simple_repeat 3 95 0 1 855 23 0 0 0 chr15 35508656 35508679 -67986295 + AT_rich Low_complexity Low_complexity 1 23 0 1 855 21 0 0 0 chr15 35508718 35508739 -67986235 + AT_rich Low_complexity Low_complexity 1 21 0 1 855 476 169 22 0 chr15 35510717 35510806 -67984168 + Lx7 LINE L1 6221 6311 -1385 1 855 21 0 0 0 chr15 35510877 35510898 -67984076 + AT_rich Low_complexity Low_complexity 1 21 0 1 855 30 0 0 0 chr15 35511219 35511249 -67983725 + AT_rich Low_complexity Low_complexity 1 30 0 2 855 430 332 43 11 chr15 35511380 35511566 -67983408 - Charlie7 DNA MER1_type -2200 412 221 2 855 224 359 33 53 chr15 35511734 35511884 -67983090 - RSINE1 SINE B4 -10 155 9 2 855 342 361 115 36 chr15 35512317 35512570 -67982404 - MER70B LTR ERVL -206 372 100 2 855 369 323 0 10 chr15 35513003 35513100 -67981874 - MER70B LTR ERVL -469 109 14 2 855 37831 31 1 0 chr15 35513557 35519988 -67974986 - L1Md_T LINE L1 0 6585 54 2 856 280 268 12 64 chr15 35520583 35520705 -67974269 - PB1D10 SINE Alu 0 120 1 2 856 951 199 316 11 chr15 35521612 35521881 -67973093 - MTB_Mm LTR MaLR -45 351 1 2 856 4810 190 57 88 chr15 35521881 35523178 -67971796 - MTB_Mm-int LTR MaLR 0 1258 2 2 856 1334 185 229 9 chr15 35523181 35523508 -67971466 - MTB_Mm LTR MaLR -8 399 1 2 856 351 374 36 7 chr15 35523753 35523893 -67971081 + RSINE1 SINE B4 14 157 -8 2 856 1194 96 31 36 chr15 35524775 35524970 -67970004 - B2_Mm2 SINE B2 0 195 2 2 856 989 274 142 13 chr15 35524984 35525669 -67969305 + RCHARR1 DNA MER1_type 44 816 -158 2 856 28 71 0 0 chr15 35527545 35527601 -67967373 + AT_rich Low_complexity Low_complexity 1 56 0 3 856 25 0 0 0 chr15 35528659 35528684 -67966290 + AT_rich Low_complexity Low_complexity 1 25 0 3 856 405 0 0 0 chr15 35528855 35528900 -67966074 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 856 2282 117 0 0 chr15 35529710 35530034 -67964940 - ORR1A2 LTR MaLR -3 324 1 3 856 27 0 0 0 chr15 35530044 35530071 -67964903 + AT_rich Low_complexity Low_complexity 1 27 0 3 856 25 51 0 0 chr15 35530644 35530683 -67964291 + AT_rich Low_complexity Low_complexity 1 39 0 3 856 1174 140 0 15 chr15 35530908 35531111 -67963863 - L1_Mur2 LINE L1 -1422 4455 4256 3 856 621 233 354 8 chr15 35531784 35532087 -67962887 + MTD LTR MaLR 1 417 -2 3 856 21 36 0 0 chr15 35532439 35532467 -67962507 + AT_rich Low_complexity Low_complexity 1 28 0 3 856 237 375 38 0 chr15 35532484 35532564 -67962410 - MIRm SINE MIR 0 276 194 3 856 1115 113 45 11 chr15 35532875 35533054 -67961920 - B2_Mm2 SINE B2 -9 186 2 4 856 475 207 156 0 chr15 35533324 35533459 -67961515 - Lx6 LINE L1 0 7460 7305 4 856 1114 95 0 0 chr15 35535337 35535484 -67959490 - B1_Mus2 SINE Alu 0 147 1 4 856 3209 61 0 2 chr15 35535632 35536042 -67958932 - L1_Mus1 LINE L1 0 6567 6159 4 856 996 110 7 7 chr15 35536181 35536327 -67958647 + B1_Mus1 SINE Alu 3 148 0 4 856 1086 95 0 20 chr15 35536577 35536727 -67958247 - B1_Mus1 SINE Alu 0 148 2 4 856 27 0 0 0 chr15 35536842 35536869 -67958105 + AT_rich Low_complexity Low_complexity 1 27 0 4 856 1173 247 116 14 chr15 35537147 35537701 -67957273 - Lx7 LINE L1 -1607 6089 5493 4 856 994 236 46 25 chr15 35537698 35537980 -67956994 - Lx7 LINE L1 -2108 3772 3485 4 856 1947 254 44 30 chr15 35538015 35538945 -67956029 - Lx7 LINE L1 -3929 1951 994 4 856 377 258 280 22 chr15 35540317 35540559 -67954415 - L1MB8 LINE L1 -8 6176 5860 4 856 31 26 0 0 chr15 35542064 35542102 -67952872 + AT_rich Low_complexity Low_complexity 1 38 0 4 856 1081 74 0 20 chr15 35542113 35542264 -67952710 - B1_Mus1 SINE Alu 0 148 1 5 856 1064 268 145 38 chr15 35542380 35543479 -67951495 - L1MC1 LINE L1 -28 6305 5096 5 856 351 136 106 0 chr15 35544239 35544305 -67950669 - HAL1-3A_ME LINE L1 -810 2048 1976 5 856 234 0 0 0 chr15 35544305 35544331 -67950643 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 5 856 309 236 0 14 chr15 35544336 35544409 -67950565 - B1_Mur2 SINE Alu -9 140 69 5 856 231 67 0 0 chr15 35544402 35544432 -67950542 - U5 snRNA snRNA -86 30 1 5 856 468 0 0 0 chr15 35544531 35544583 -67950391 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 856 376 310 32 26 chr15 35544707 35544896 -67950078 - L1ME1 LINE L1 -179 6000 5811 5 856 242 274 73 10 chr15 35545622 35545718 -67949256 - L1MC1 LINE L1 -2046 4100 3999 5 856 297 81 16 31 chr15 35546445 35546509 -67948465 + (TA)n Simple_repeat Simple_repeat 2 64 0 5 856 230 291 126 14 chr15 35546518 35546661 -67948313 + Charlie7a DNA MER1_type 47 205 -67 5 856 189 139 0 0 chr15 35546661 35546704 -67948270 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 856 23 0 0 0 chr15 35547272 35547295 -67947679 + AT_rich Low_complexity Low_complexity 1 23 0 6 856 21 57 0 0 chr15 35547597 35547632 -67947342 + AT_rich Low_complexity Low_complexity 1 35 0 6 856 635 66 38 0 chr15 35548357 35548463 -67946511 + (TCTA)n Simple_repeat Simple_repeat 4 113 0 6 856 355 344 0 0 chr15 35548471 35548567 -67946407 - RSINE1 SINE B4 -56 109 14 6 856 1204 48 0 0 chr15 35549259 35549405 -67945569 + B1_Mus2 SINE Alu 2 147 0 6 856 210 105 0 0 chr15 35549405 35549443 -67945531 + (A)n Simple_repeat Simple_repeat 1 38 0 6 856 29 60 0 0 chr15 35550325 35550375 -67944599 + AT_rich Low_complexity Low_complexity 1 50 0 6 856 364 298 183 62 chr15 35550613 35551026 -67943948 - L1MD3 LINE L1 -2070 5925 5458 6 856 6595 43 5 6 chr15 35552446 35553273 -67941701 - L1Md_F2 LINE L1 0 6582 5757 6 856 249 300 12 12 chr15 35554432 35554513 -67940461 + ID4_ SINE ID 2 82 -1 7 856 21 57 0 0 chr15 35554599 35554634 -67940340 + AT_rich Low_complexity Low_complexity 1 35 0 7 856 915 155 23 6 chr15 35555507 35555682 -67939292 - L1_Mur2 LINE L1 -2959 2918 2741 7 856 609 179 0 0 chr15 35555683 35555789 -67939185 + L1_Mm LINE L1 4509 4614 -1269 7 856 7517 78 15 3 chr15 35555784 35557457 -67937517 - L1Md_F2 LINE L1 -19 6563 4870 7 856 289 319 0 14 chr15 35557457 35557527 -67937447 - B1F2 SINE Alu -76 73 5 7 856 232 318 48 0 chr15 35557471 35557534 -67937440 - B4A SINE B4 -147 145 80 7 856 1275 92 16 31 chr15 35558113 35558304 -67936670 + B2_Mm2 SINE B2 1 188 -7 7 856 249 257 74 28 chr15 35558427 35558535 -67936439 - L1M4 LINE L1 -1793 4353 4241 7 856 882 143 0 0 chr15 35558539 35558686 -67936288 + (TTC)n Simple_repeat Simple_repeat 3 149 0 7 856 29 28 0 0 chr15 35558713 35558749 -67936225 + AT_rich Low_complexity Low_complexity 1 36 0 8 856 472 252 34 17 chr15 35558776 35558893 -67936081 - B1_Mur4 SINE Alu 0 150 32 8 856 33316 42 59 3 chr15 35559395 35565423 -67929551 - L1Md_T LINE L1 0 6585 101 8 856 264 294 56 56 chr15 35565488 35565596 -67929378 + B1F1 SINE Alu 35 142 -7 8 856 32 43 0 0 chr15 35565971 35566017 -67928957 + AT_rich Low_complexity Low_complexity 1 46 0 8 856 1778 213 83 35 chr15 35568028 35568510 -67926464 - RLTR28 LTR ERVL 0 524 20 8 856 26 30 0 0 chr15 35569514 35569547 -67925427 + AT_rich Low_complexity Low_complexity 1 33 0 8 856 180 0 0 0 chr15 35569575 35569595 -67925379 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 8 856 25 51 0 0 chr15 35569788 35569827 -67925147 + AT_rich Low_complexity Low_complexity 1 39 0 8 856 24 53 0 0 chr15 35570973 35571011 -67923963 + AT_rich Low_complexity Low_complexity 1 38 0 8 856 197 135 19 0 chr15 35571530 35571582 -67923392 + T-rich Low_complexity Low_complexity 3 55 0 9 856 1087 84 0 0 chr15 35571587 35571729 -67923245 - B1_Mm SINE Alu -5 142 1 9 856 217 358 21 28 chr15 35571825 35571966 -67923008 - L2a LINE L2 -36 3390 3251 9 856 25 51 0 0 chr15 35572234 35572273 -67922701 + AT_rich Low_complexity Low_complexity 1 39 0 9 856 214 250 31 0 chr15 35572712 35572776 -67922198 + (TCTCTG)n Simple_repeat Simple_repeat 4 69 0 9 856 1190 27 7 27 chr15 35574002 35574152 -67920822 + B1_Mus1 SINE Alu 2 148 0 9 856 222 128 0 0 chr15 35574156 35574195 -67920779 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 9 856 23 33 0 0 chr15 35574335 35574365 -67920609 + AT_rich Low_complexity Low_complexity 1 30 0 9 856 335 125 28 0 chr15 35574450 35574522 -67920452 + Lx2 LINE L1 6901 6974 -23 9 856 640 179 21 0 chr15 35574523 35574668 -67920306 + GA-rich Low_complexity Low_complexity 1 148 0 9 856 322 21 21 21 chr15 35575225 35575273 -67919701 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 856 22 0 0 0 chr15 35575671 35575693 -67919281 + AT_rich Low_complexity Low_complexity 1 22 0 1 856 449 332 42 1 chr15 35577045 35577232 -67917742 - MLT1A1 LTR MaLR -7 401 172 1 856 1946 183 25 14 chr15 35577308 35577815 -67917159 - Lx4B LINE L1 -45 7013 6437 1 856 273 274 47 12 chr15 35577820 35577905 -67917069 - MLT1A1 LTR MaLR -286 88 1 1 856 24 32 0 0 chr15 35578583 35578614 -67916360 + AT_rich Low_complexity Low_complexity 1 31 0 1 856 366 252 159 18 chr15 35578799 35578912 -67916062 - RSINE1 SINE B4 -22 143 15 1 856 360 176 0 0 chr15 35579294 35579362 -67915612 + CT-rich Low_complexity Low_complexity 3 70 0 1 856 357 303 7 50 chr15 35579645 35579664 -67915310 + ID_B1 SINE B4 77 209 -15 1 856 402 300 25 0 chr15 35579664 35579784 -67915190 + B1F SINE Alu 12 134 -15 1 856 204 216 0 0 chr15 35579788 35579825 -67915149 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 856 1502 63 87 0 chr15 35581490 35581696 -67913278 + L1_Mus2 LINE L1 6260 6483 -83 1 856 29 0 0 0 chr15 35581851 35581880 -67913094 + AT_rich Low_complexity Low_complexity 1 29 0 1 856 226 289 45 71 chr15 35582949 35583061 -67911913 - PB1D7 SINE Alu -8 112 4 1 856 202 29 57 0 chr15 35583111 35583146 -67911828 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 856 246 269 59 52 chr15 35584283 35584436 -67910538 + L1MB7 LINE L1 5905 6058 -126 1 856 235 379 17 33 chr15 35584652 35584772 -67910202 - MER21B LTR ERV1 -731 132 15 1 856 461 310 123 10 chr15 35584832 35585124 -67909850 + L1MB7 LINE L1 5528 5858 -321 1 856 1133 65 0 0 chr15 35585302 35585440 -67909534 + B1_Mus1 SINE Alu 5 142 -6 1 856 194 0 0 37 chr15 35585440 35585467 -67909507 + (GGAA)n Simple_repeat Simple_repeat 1 26 0 1 856 1076 79 0 7 chr15 35585467 35585620 -67909354 + (GGAAA)n Simple_repeat Simple_repeat 5 156 0 1 856 245 272 65 0 chr15 35585672 35585764 -67909210 + MER33 DNA MER1_type 11 108 -216 1 856 694 291 50 15 chr15 35586429 35586628 -67908346 - B4A SINE B4 -35 257 52 1 856 426 294 26 19 chr15 35588122 35588278 -67906696 + RSINE1 SINE B4 3 159 -6 1 856 6684 52 3 7 chr15 35588280 35589129 -67905845 + L1Md_F2 LINE L1 5725 6570 -12 1 856 401 304 30 43 chr15 35592072 35592272 -67902702 - ORR1E LTR MaLR 0 379 173 1 856 485 291 85 38 chr15 35592296 35592507 -67902467 - ORR1E LTR MaLR -119 240 20 1 856 843 164 193 56 chr15 35592894 35593127 -67901847 + L1_Mus4 LINE L1 6367 6631 -5 1 856 708 81 0 18 chr15 35594366 35594479 -67900495 + L1_Mus2 LINE L1 6455 6565 -1 1 856 824 61 18 0 chr15 35594579 35594693 -67900281 + (GAAA)n Simple_repeat Simple_repeat 3 118 0 1 856 234 0 0 0 chr15 35594725 35594751 -67900223 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 1 856 5336 56 46 6 chr15 35595177 35595877 -67899097 - L1Md_F2 LINE L1 -14 6568 5841 1 856 369 295 70 18 chr15 35595921 35596149 -67898825 - L1M5 LINE L1 -3337 2809 2570 1 856 4146 75 5 23 chr15 35597563 35598133 -67896841 - L1_Mus3 LINE L1 -2 6636 6077 1 856 28 29 0 0 chr15 35599166 35599201 -67895773 + AT_rich Low_complexity Low_complexity 1 35 0 1 856 311 295 0 194 chr15 35600452 35600612 -67894362 + B1F2 SINE Alu 1 129 -20 1 856 259 301 0 21 chr15 35601312 35601407 -67893567 - MIR SINE MIR -57 205 113 1 856 230 265 39 48 chr15 35601684 35601787 -67893187 - Lx7 LINE L1 0 7696 7595 1 856 918 126 28 0 chr15 35601832 35601975 -67892999 + B1_Mus2 SINE Alu 1 147 0 1 856 954 274 131 7 chr15 35602098 35602503 -67892471 - Lx7 LINE L1 -416 7280 6826 1 856 26459 65 7 3 chr15 35606377 35610506 -67884468 - L1Md_F2 LINE L1 -3 6579 2434 1 856 943 81 37 0 chr15 35610507 35610643 -67884331 - L1_Mus1 LINE L1 0 6567 6427 1 856 25 31 0 0 chr15 35612217 35612249 -67882725 + AT_rich Low_complexity Low_complexity 1 32 0 1 856 32 26 0 0 chr15 35612678 35612717 -67882257 + AT_rich Low_complexity Low_complexity 1 39 0 1 856 340 105 0 0 chr15 35612946 35613003 -67881971 - B2_Mm1a SINE B2 -10 183 127 1 856 1167 135 17 0 chr15 35613023 35613201 -67881773 - B2_Mm2 SINE B2 -14 181 1 1 856 3368 181 13 9 chr15 35613201 35613898 -67881076 - L1_Mur3 LINE L1 -500 5380 4681 1 856 234 173 19 37 chr15 35614026 35614080 -67880894 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 1 856 1000 207 51 5 chr15 35616564 35616778 -67878196 + URR1A DNA MER1_type 3 226 0 1 856 226 370 11 0 chr15 35617817 35617909 -67877065 - MLT1D LTR MaLR -164 341 249 1 856 350 244 218 44 chr15 35618406 35618745 -67876229 - L1MB8 LINE L1 -144 6034 5637 1 856 389 261 246 21 chr15 35619103 35619489 -67875485 - L1MA4A LINE L1 -418 5885 5405 1 856 1728 164 97 89 chr15 35619508 35620057 -67874917 - RLTR31_Mur LTR ERVK 0 553 1 1 856 1953 206 34 42 chr15 35620420 35621009 -67873965 - Lx5 LINE L1 -1021 6029 5424 1 856 4656 103 0 0 chr15 35621119 35621801 -67873173 - L1_Mm LINE L1 -96 5787 5106 1 856 865 304 52 19 chr15 35621806 35622115 -67872859 - Charlie1a DNA MER1_type -866 589 271 1 856 358 203 49 42 chr15 35622366 35622510 -67872464 - Lx7 LINE L1 -156 7540 7396 1 856 306 184 79 0 chr15 35622510 35622586 -67872388 - RLTR25A LTR ERVK -11 1092 1011 1 856 294 231 92 0 chr15 35624178 35624243 -67870731 - PB1D7 SINE Alu -8 112 42 1 856 228 35 0 0 chr15 35624892 35624921 -67870053 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 856 521 307 141 29 chr15 35625244 35625697 -67869277 + L1MB7 LINE L1 5323 5826 -358 1 856 423 341 63 20 chr15 35625895 35626197 -67868777 + L1MA7 LINE L1 5485 5799 -501 1 856 222 176 0 0 chr15 35626197 35626248 -67868726 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 1 856 714 273 145 18 chr15 35626256 35626703 -67868271 + L1MA7 LINE L1 5786 6289 -2 1 856 259 260 135 14 chr15 35626715 35626789 -67868185 + PB1D9 SINE Alu 2 84 -36 1 856 512 319 99 0 chr15 35627172 35627313 -67867661 + RSINE1 SINE B4 11 165 0 1 856 287 67 44 0 chr15 35627323 35627368 -67867606 + (CATA)n Simple_repeat Simple_repeat 1 47 0 1 856 1333 0 0 0 chr15 35628029 35628215 -67866759 - L1Md_T LINE L1 0 6582 6428 1 856 911 95 221 0 chr15 35629751 35629909 -67865065 + B2_Mm1t SINE B2 1 193 0 1 856 480 202 90 30 chr15 35630276 35630292 -67864682 - B1F2 SINE Alu 0 149 9 1 856 501 204 17 34 chr15 35630292 35630409 -67864565 - ID_B1 SINE B4 -20 204 90 1 856 432 0 0 0 chr15 35631304 35631352 -67863622 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 856 180 236 0 52 chr15 35631910 35631968 -67863006 + L2 LINE L2 2301 2355 -1064 1 856 337 340 0 0 chr15 35633207 35633301 -67861673 + LFSINE_Vert SINE SINE 44 137 -322 1 856 2942 51 75 0 chr15 35634070 35634442 -67860532 + MTB LTR MaLR 1 400 0 1 856 232 266 291 42 chr15 35634882 35635047 -67859927 - MIRb SINE MIR -31 237 32 1 856 349 253 35 0 chr15 35636555 35636642 -67858332 + B1F SINE Alu 59 148 -1 1 856 270 0 0 0 chr15 35636856 35636886 -67858088 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 856 405 0 0 0 chr15 35636886 35636931 -67858043 + (TTA)n Simple_repeat Simple_repeat 3 47 0 1 856 243 382 0 13 chr15 35637495 35637572 -67857402 + ID4_ SINE ID 2 77 -6 1 856 4566 69 128 5 chr15 35637638 35638297 -67856677 - L1Md_F2 LINE L1 -8 6574 5835 1 856 334 287 46 0 chr15 35638555 35638642 -67856332 + B1F SINE Alu 38 128 -21 1 856 276 137 0 0 chr15 35638642 35638693 -67856281 + (A)n Simple_repeat Simple_repeat 1 51 0 1 856 300 149 41 82 chr15 35640237 35640310 -67854664 - MTEb LTR MaLR -40 339 270 1 856 288 248 123 9 chr15 35640391 35640497 -67854477 + MER63B DNA AcHobo 311 428 -8 1 856 193 291 36 18 chr15 35640526 35640582 -67854392 - L2a LINE L2 -21 3405 3349 1 856 329 195 35 47 chr15 35640872 35640958 -67854016 - HAL1-3A_ME LINE L1 -799 2059 1975 1 856 229 318 0 0 chr15 35640958 35641021 -67853953 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 856 341 297 81 41 chr15 35641581 35641753 -67853221 - MIRb SINE MIR -36 232 54 1 856 29 0 0 0 chr15 35642431 35642460 -67852514 + AT_rich Low_complexity Low_complexity 1 29 0 1 856 441 0 0 0 chr15 35642805 35642854 -67852120 + (TAA)n Simple_repeat Simple_repeat 1 49 0 1 856 635 88 186 0 chr15 35642971 35643084 -67851890 - MusHAL1 LINE L1 -148 3205 3072 1 856 33629 69 1 1 chr15 35643087 35649340 -67845634 - L1Md_F2 LINE L1 0 6582 331 1 856 14487 77 24 18 chr15 35649342 35651398 -67843576 - MusHAL1 LINE L1 -273 3080 1015 1 13 3447 28 2 0 chr15 35651398 35651793 -67843181 + MTA_Mm LTR MaLR 1 396 0 1 857 14487 77 24 18 chr15 35651793 35652039 -67842935 - MusHAL1 LINE L1 -2339 1014 765 1 857 2066 127 115 11 chr15 35652028 35652403 -67842571 - MusHAL1 LINE L1 -2934 420 7 1 857 1081 222 198 13 chr15 35652541 35652855 -67842119 + MTD LTR MaLR 42 413 -6 1 857 732 141 49 8 chr15 35653679 35653801 -67841173 + B1_Mus2 SINE Alu 2 128 -19 1 857 234 174 0 0 chr15 35654233 35654279 -67840695 + (CATA)n Simple_repeat Simple_repeat 1 46 0 1 857 200 184 20 0 chr15 35654984 35655033 -67839941 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 857 23 86 0 0 chr15 35655238 35655296 -67839678 + AT_rich Low_complexity Low_complexity 1 58 0 1 857 22 0 0 0 chr15 35655448 35655470 -67839504 + AT_rich Low_complexity Low_complexity 1 22 0 1 857 563 309 34 24 chr15 35655967 35656173 -67838801 + MIR SINE MIR 48 255 -7 1 857 3534 157 99 131 chr15 35657230 35658162 -67836812 - RMER19B LTR ERVK 0 902 1 1 857 813 234 52 0 chr15 35658761 35658953 -67836021 - B3 SINE B2 -11 205 4 1 857 3281 40 7 7 chr15 35659160 35659568 -67835406 + L1_Mus2 LINE L1 6159 6566 0 1 857 1440 178 62 107 chr15 35660048 35660137 -67834837 + ORR1C2 LTR MaLR 1 87 -297 2 857 1341 83 6 6 chr15 35660137 35660318 -67834656 + B2_Mm2 SINE B2 1 181 -14 2 857 1440 178 62 107 chr15 35660318 35660630 -67834344 + ORR1C2 LTR MaLR 88 384 0 2 857 828 204 36 6 chr15 35660630 35660798 -67834176 + ORR1C2-int LTR MaLR 1 173 -1197 2 857 889 251 137 12 chr15 35660949 35660978 -67833996 - MERVL_2A-int LTR ERVL -295 5462 5428 2 857 531 31 0 0 chr15 35660978 35661043 -67833931 + (GA)n Simple_repeat Simple_repeat 2 66 0 2 857 1058 224 132 0 chr15 35661043 35661335 -67833639 - MERVL_2A-int LTR ERVL -276 5485 5101 2 857 4543 284 62 22 chr15 35661365 35662836 -67832138 - MERVL_2A-int LTR ERVL -712 5049 3520 2 857 448 306 52 60 chr15 35663098 35663379 -67831595 + MTE2b LTR MaLR 1 269 -150 2 857 344 307 128 55 chr15 35664413 35664703 -67830271 + L1ME3A LINE L1 5582 5892 -281 2 857 508 263 156 7 chr15 35664874 35665062 -67829912 + MTE2b LTR MaLR 176 379 0 2 857 589 88 11 42 chr15 35665322 35665417 -67829557 - MURVY-LTR LTR ERV1 0 519 428 2 857 375 267 0 0 chr15 35665792 35665882 -67829092 + PB1D10 SINE Alu 26 115 -2 2 857 5275 77 51 10 chr15 35666028 35666928 -67828046 - L1VL2 LINE L1 -1800 1815 875 2 857 8372 52 1 4 chr15 35666922 35668648 -67826326 - L1Md_F2 LINE L1 0 6582 4862 2 857 5329 98 31 52 chr15 35668647 35669479 -67825495 - L1VL2 LINE L1 -5455 880 66 2 857 519 275 103 1 chr15 35669516 35669661 -67825313 + B3A SINE B2 3 163 -35 2 857 566 118 27 18 chr15 35669665 35669777 -67825197 + L1_Mus3 LINE L1 6508 6620 -18 2 857 1000 71 0 0 chr15 35669784 35669911 -67825063 + B1_Mus1 SINE Alu 21 147 -1 2 857 200 34 0 33 chr15 35669911 35669941 -67825033 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 857 186 43 0 0 chr15 35671759 35671782 -67823192 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 857 3373 41 0 8 chr15 35672557 35672947 -67822027 + L1Md_F2 LINE L1 6195 6581 -1 2 857 21 57 0 0 chr15 35674774 35674809 -67820165 + AT_rich Low_complexity Low_complexity 1 35 0 2 857 193 369 31 10 chr15 35676003 35676107 -67818867 - MIR3 SINE MIR -30 178 76 2 857 242 287 13 139 chr15 35676800 35676958 -67818016 - MER104 DNA Tc2 0 181 44 2 857 23 0 0 0 chr15 35678646 35678669 -67816305 + AT_rich Low_complexity Low_complexity 1 23 0 2 857 26994 126 43 9 chr15 35679057 35681644 -67813330 + L1_Mus3 LINE L1 878 3636 -2247 2 857 1131 116 0 0 chr15 35681644 35681790 -67813184 + B1_Mus2 SINE Alu 2 147 0 2 857 26994 116 38 8 chr15 35681790 35684528 -67810446 + L1_Mus3 LINE L1 3637 6390 -248 2 857 611 172 25 33 chr15 35684568 35684688 -67810286 - B1_Mur1 SINE Alu -1 148 30 2 857 3355 294 38 39 chr15 35684810 35685934 -67809040 - Lx8 LINE L1 -156 7317 6195 2 857 2225 109 77 11 chr15 35686054 35686416 -67808558 - LTRIS4 LTR ERV1 0 507 122 2 857 284 172 0 17 chr15 35686424 35686483 -67808491 - MuRRS4-int LTR ERV1 0 5063 5006 2 857 183 279 22 65 chr15 35687050 35687142 -67807832 + L2b LINE L2 3228 3315 -60 2 857 358 272 142 29 chr15 35687752 35687998 -67806976 - L1MC5 LINE L1 -722 7239 6966 2 857 555 283 127 89 chr15 35688870 35689231 -67805743 - MTEb LTR MaLR -3 376 2 2 857 25 51 0 0 chr15 35692493 35692532 -67802442 + AT_rich Low_complexity Low_complexity 1 39 0 2 857 626 276 85 58 chr15 35692881 35693104 -67801870 - B4A SINE B4 0 292 64 2 857 256 379 85 17 chr15 35693112 35693230 -67801744 - B4 SINE B4 -118 174 49 2 857 501 265 152 19 chr15 35693245 35693584 -67801390 - L1MD2 LINE L1 -1949 4595 4193 2 857 186 43 0 0 chr15 35693613 35693636 -67801338 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 857 286 247 375 0 chr15 35693644 35693740 -67801234 - RSINE1 SINE B4 -31 134 3 2 857 269 287 130 8 chr15 35693752 35693875 -67801099 - L1MD2 LINE L1 -2414 4130 3993 2 857 243 294 93 89 chr15 35693866 35694050 -67800924 - L1MD2 LINE L1 -6191 356 180 2 857 924 157 0 22 chr15 35694050 35694187 -67800787 - B1_Mur3 SINE Alu -15 134 1 2 857 243 294 93 89 chr15 35694187 35694293 -67800681 - L1MD2 LINE L1 -6368 179 65 2 857 687 242 125 61 chr15 35696324 35696708 -67798266 + L1MB8 LINE L1 4834 5244 -902 2 857 768 168 0 8 chr15 35696764 35696884 -67798090 + PB1D9 SINE Alu 2 120 0 2 857 438 235 68 108 chr15 35696909 35697057 -67797917 + B4A SINE B4 9 150 -142 2 857 243 0 0 0 chr15 35697149 35697176 -67797798 + (TCTG)n Simple_repeat Simple_repeat 4 30 0 2 857 230 273 50 10 chr15 35697192 35697292 -67797682 + L1MB8 LINE L1 5321 5424 -867 2 857 301 339 46 29 chr15 35697310 35697483 -67797491 + L1MB8 LINE L1 5844 6019 -159 2 857 803 85 34 0 chr15 35697787 35697905 -67797069 - Lx3_Mus LINE L1 -495 6514 6393 2 857 633 27 0 0 chr15 35697906 35697981 -67796993 + (TTCTC)n Simple_repeat Simple_repeat 3 77 0 2 857 3205 105 114 22 chr15 35697993 35698014 -67796960 - Lx3_Mus LINE L1 -570 6439 6416 2 857 5089 53 7 21 chr15 35698014 35698625 -67796349 - L1_Mus1 LINE L1 -2 6565 5964 2 857 3205 105 114 22 chr15 35698625 35699157 -67795817 - Lx3_Mus LINE L1 -594 6415 5836 2 857 4015 80 21 2 chr15 35699157 35699669 -67795305 + Lx3_Mus LINE L1 6488 7009 0 2 857 591 15 0 0 chr15 35700762 35700830 -67794144 + (GTTTG)n Simple_repeat Simple_repeat 5 72 0 2 857 395 311 48 11 chr15 35701026 35701203 -67793771 + MER5A DNA MER1_type 1 177 -1 2 857 746 194 27 40 chr15 35702713 35702863 -67792111 - B1_Mur2 SINE Alu 0 149 2 2 857 1285 48 0 0 chr15 35703804 35703951 -67791023 + B1_Mus1 SINE Alu 2 148 0 2 857 180 111 0 0 chr15 35703951 35703978 -67790996 + (A)n Simple_repeat Simple_repeat 1 27 0 2 857 787 61 248 26 chr15 35704344 35704461 -67790513 + B1_Mus1 SINE Alu 1 143 -5 2 857 25 51 0 0 chr15 35706074 35706113 -67788861 + AT_rich Low_complexity Low_complexity 1 39 0 2 857 223 235 118 0 chr15 35706376 35706444 -67788530 - B4 SINE B4 -207 85 10 2 857 22 35 0 0 chr15 35706452 35706481 -67788493 + GC_rich Low_complexity Low_complexity 1 29 0 2 857 261 0 0 0 chr15 35706488 35706517 -67788457 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 2 857 1827 93 18 22 chr15 35707450 35707724 -67787250 - MT2C_Mm LTR ERVL 0 475 203 2 857 421 245 38 29 chr15 35709152 35709257 -67785717 + PB1D10 SINE Alu 4 109 -8 2 857 4241 103 7 14 chr15 35709383 35709954 -67785020 - RMER2 LTR ERV1 0 567 1 2 857 2788 196 87 158 chr15 35710210 35711302 -67783672 - RMER1B Other Other -3 1063 49 2 857 186 43 0 0 chr15 35711997 35712020 -67782954 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 857 200 31 62 0 chr15 35712391 35712423 -67782551 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 857 4842 76 3 0 chr15 35712424 35713004 -67781970 - MT2B2 LTR ERVL -2 582 1 2 857 418 176 43 32 chr15 35713042 35713136 -67781838 - ORR1A3-int LTR MaLR -1323 640 546 2 857 264 56 28 0 chr15 35713136 35713172 -67781802 - MERVL_2A-int LTR ERVL -153 5608 5572 2 857 1598 131 46 15 chr15 35713185 35713448 -67781526 - MERVL_2A-int LTR ERVL -241 5520 5250 2 857 585 26 90 0 chr15 35713449 35713527 -67781447 - MERVL_2A-int LTR ERVL -450 5035 4951 2 857 17029 19 0 0 chr15 35713527 35715459 -67779515 + L1Md_T LINE L1 3655 5586 -297 2 857 9484 10 0 0 chr15 35715459 35716455 -67778519 + L1Md_T LINE L1 5587 6582 0 2 857 1104 219 15 8 chr15 35716474 35716736 -67778238 + L1_Mur3 LINE L1 2144 2407 -3473 2 857 198 0 0 0 chr15 35716736 35716758 -67778216 + (A)n Simple_repeat Simple_repeat 1 22 0 2 857 10639 109 64 5 chr15 35716758 35718307 -67776667 - MERVL-int LTR ERVL -534 4951 3312 2 857 350 118 0 0 chr15 35718290 35718341 -67776633 + MERVL-int LTR ERVL 751 801 -4684 2 857 286 113 0 232 chr15 35718341 35718410 -67776564 + MT2B LTR ERVL 229 281 -320 2 857 1959 128 81 13 chr15 35718375 35718888 -67776086 + ORR1B2 LTR MaLR 21 941 -1022 2 857 545 311 170 3 chr15 35718889 35719189 -67775785 + L1MC4a LINE L1 6701 7050 -832 2 857 21 0 0 0 chr15 35719281 35719302 -67775672 + AT_rich Low_complexity Low_complexity 1 21 0 2 857 750 23 0 0 chr15 35720031 35720119 -67774855 + (GAAA)n Simple_repeat Simple_repeat 3 90 0 2 857 230 260 114 61 chr15 35720167 35720298 -67774676 + RLTR25B LTR ERVK 372 509 -519 2 857 535 94 122 20 chr15 35720233 35720331 -67774643 + B1_Mus2 SINE Alu 39 146 -1 2 857 201 108 0 0 chr15 35720501 35720538 -67774436 + (A)n Simple_repeat Simple_repeat 1 37 0 2 857 264 59 0 0 chr15 35721712 35721746 -67773228 + (GA)n Simple_repeat Simple_repeat 1 34 0 2 857 450 282 6 19 chr15 35722267 35722426 -67772548 - L1M4 LINE L1 -405 5779 5623 2 857 1065 104 37 6 chr15 35724761 35724925 -67770049 - B2_Mm2 SINE B2 -3 192 24 2 857 441 0 0 0 chr15 35724925 35724974 -67770000 + (TTTTC)n Simple_repeat Simple_repeat 4 52 0 2 857 1216 75 7 0 chr15 35724975 35725121 -67769853 - B1_Mus1 SINE Alu 0 148 2 2 857 2672 30 0 7 chr15 35725165 35725469 -67769505 - L1Md_F2 LINE L1 0 6582 6281 2 857 251 67 0 0 chr15 35725469 35725499 -67769475 + L1Md_F2 LINE L1 4382 4411 -1472 2 857 8105 59 9 196 chr15 35725499 35726434 -67768540 + L1Md_F2 LINE L1 4640 5569 -314 2 857 8762 38 0 1 chr15 35726434 35727414 -67767560 + L1Md_F3 LINE L1 5587 6565 -19 2 857 477 0 0 0 chr15 35727414 35727467 -67767507 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 857 8105 54 4 58 chr15 35727467 35728467 -67766507 + L1Md_F2 LINE L1 5570 6292 -290 2 857 252 312 90 26 chr15 35728855 35729041 -67765933 + MIRc SINE MIR 63 248 -20 2 857 681 244 123 26 chr15 35729310 35729627 -67765347 - MTB LTR MaLR -12 388 10 2 857 605 192 0 62 chr15 35730708 35730836 -67764138 - B1_Mur1 SINE Alu 0 149 30 2 857 724 108 66 8 chr15 35730815 35730937 -67764037 + B1_Mur4 SINE Alu 22 150 0 2 857 619 243 91 27 chr15 35731159 35731345 -67763629 - B3A SINE B2 0 198 1 2 857 381 43 0 0 chr15 35731469 35731516 -67763458 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2 857 5967 94 40 1 chr15 35731691 35732700 -67762274 - Lx LINE L1 -2107 3779 2737 2 857 12954 143 15 13 chr15 35732699 35735566 -67759408 + Lx LINE L1 3772 6648 -6 2 857 793 272 14 12 chr15 35735604 35735806 -67759168 - B3A SINE B2 -3 213 9 2 857 354 240 51 39 chr15 35737415 35737493 -67757481 + ID4_ SINE ID 5 83 0 2 857 1328 20 0 0 chr15 35737504 35737650 -67757324 + B1_Mus2 SINE Alu 2 147 0 2 857 222 62 0 0 chr15 35737650 35737682 -67757292 + (A)n Simple_repeat Simple_repeat 1 32 0 2 857 234 345 75 27 chr15 35738091 35738237 -67756737 - MIRb SINE MIR -14 254 102 2 857 648 323 141 33 chr15 35738847 35739180 -67755794 - MLT1J LTR MaLR -30 482 114 2 857 419 280 209 59 chr15 35739736 35739975 -67754999 + B4A SINE B4 1 275 -17 2 857 824 75 22 7 chr15 35739989 35740124 -67754850 + (CA)n Simple_repeat Simple_repeat 2 138 0 2 857 774 130 195 0 chr15 35740367 35740490 -67754484 - B1_Mus1 SINE Alu -1 147 1 3 857 1171 305 62 46 chr15 35740690 35741322 -67753652 - Lx8 LINE L1 -240 7233 6592 3 857 340 305 104 86 chr15 35741333 35741555 -67753419 + MIR SINE MIR 20 245 -17 3 857 2949 136 97 45 chr15 35741746 35742089 -67752885 - RMER19B LTR ERVK 0 902 541 3 857 1729 84 17 8 chr15 35742089 35742330 -67752644 + L1_Mus3 LINE L1 6396 6638 0 3 857 2949 136 97 45 chr15 35742330 35742535 -67752439 - RMER19B LTR ERVK -362 540 326 3 857 895 97 8 0 chr15 35742536 35742660 -67752314 + B2_Mm2 SINE B2 2 126 -69 3 857 1301 186 5 5 chr15 35742682 35742903 -67752071 - RMER19B LTR ERVK -586 316 96 3 857 481 246 35 0 chr15 35742905 35743019 -67751955 + RSINE1 SINE B4 13 130 -35 3 857 330 317 77 0 chr15 35743023 35743127 -67751847 - RSINE1 SINE B4 -51 114 3 3 857 196 321 111 28 chr15 35743238 35743382 -67751592 - L2 LINE L2 -829 2590 2435 3 857 332 362 67 7 chr15 35743868 35744018 -67750956 - MIR SINE MIR -90 172 14 3 857 1567 261 44 12 chr15 35744197 35744605 -67750369 - Lx6 LINE L1 -13 7447 7027 3 857 26 30 0 0 chr15 35744673 35744706 -67750268 + AT_rich Low_complexity Low_complexity 1 33 0 3 857 955 255 80 25 chr15 35745157 35745431 -67749543 - B4A SINE B4 -1 291 3 3 857 301 245 124 31 chr15 35745472 35745569 -67749405 - PB1 SINE Alu -19 108 3 3 857 396 320 80 20 chr15 35747162 35747312 -67747662 - RSINE1 SINE B4 -4 161 3 3 857 212 315 36 29 chr15 35747565 35747790 -67747184 - SUBTEL_sa Satellite Satellite -5 226 1 3 857 204 312 31 31 chr15 35747866 35747995 -67746979 - SUBTEL_sa Satellite Satellite -17 157 29 3 857 228 210 63 46 chr15 35748137 35748312 -67746662 + (CAGTG)n Simple_repeat Simple_repeat 1 178 0 3 857 226 315 36 30 chr15 35748348 35748631 -67746343 - SUBTEL_sa Satellite Satellite -5 284 1 3 857 249 178 79 48 chr15 35748582 35748747 -67746227 + (CAGTG)n Simple_repeat Simple_repeat 1 170 0 3 857 1265 54 0 0 chr15 35749181 35749328 -67745646 + B1_Mus1 SINE Alu 2 148 0 3 857 351 0 0 0 chr15 35749643 35749682 -67745292 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 857 23 60 0 43 chr15 35751618 35751688 -67743286 + AT_rich Low_complexity Low_complexity 1 67 0 3 857 318 50 0 0 chr15 35752260 35752300 -67742674 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 857 616 326 165 15 chr15 35753025 35753424 -67741550 + L1M4 LINE L1 807 1265 -5639 3 857 293 273 24 91 chr15 35753824 35753989 -67740985 + L1M4 LINE L1 1357 1510 -5394 3 857 248 245 61 10 chr15 35754560 35754659 -67740315 + L1M4 LINE L1 1659 1762 -5142 3 857 301 279 77 0 chr15 35754700 35754804 -67740170 + L1M4 LINE L1 1822 1933 -4971 3 857 276 286 64 57 chr15 35754889 35755047 -67739927 + L1M4 LINE L1 2077 2225 -5109 3 857 812 295 28 12 chr15 35755159 35755406 -67739568 + Lx8 LINE L1 7094 7344 -129 3 857 200 372 91 23 chr15 35755565 35755697 -67739277 + MIRb SINE MIR 83 223 -45 3 857 1072 169 31 202 chr15 35758128 35758573 -67736401 - Lx7 LINE L1 0 7696 7328 3 857 577 322 36 18 chr15 35758884 35759105 -67735869 - Lx8 LINE L1 -57 7416 7192 3 857 441 275 78 50 chr15 35759253 35759433 -67735541 - Lx8 LINE L1 -527 6946 6762 3 857 765 214 99 30 chr15 35759450 35759652 -67735322 - RMER1B Other Other 0 1066 851 3 857 1288 258 56 9 chr15 35759662 35759999 -67734975 - Lx8 LINE L1 -714 6759 6407 3 857 3538 55 5 0 chr15 35760317 35760735 -67734239 - L1_Mus1 LINE L1 0 6567 6148 3 857 324 336 136 8 chr15 35761022 35761033 -67733941 - B1F2 SINE Alu 0 149 6 3 857 468 248 9 60 chr15 35761033 35761149 -67733825 - ID_B1 SINE B4 -28 196 87 3 857 2179 166 56 8 chr15 35761331 35761725 -67733249 + MTC LTR MaLR 1 413 -8 3 857 865 278 74 0 chr15 35761735 35761951 -67733023 + B4A SINE B4 43 274 -18 3 857 495 309 112 10 chr15 35762781 35763011 -67731963 - LTR40b LTR ERVL -15 504 235 3 857 915 211 81 52 chr15 35763682 35763892 -67731082 - B3 SINE B2 0 216 1 3 857 22 56 0 0 chr15 35765928 35765964 -67729010 + AT_rich Low_complexity Low_complexity 1 36 0 3 857 1216 58 4 9 chr15 35766062 35766289 -67728685 + (TCTCC)n Simple_repeat Simple_repeat 1 226 0 3 857 3340 184 42 0 chr15 35766295 35766883 -67728091 + RMER1B Other Other 434 1046 -20 3 857 202 421 0 0 chr15 35766919 35767097 -67727877 + (TGG)n Simple_repeat Simple_repeat 1 178 0 3 857 928 215 10 19 chr15 35767170 35767379 -67727595 + RLTR19-int LTR ERVK 1429 1635 -4502 3 857 550 238 54 6 chr15 35767383 35767551 -67727423 + Lx3C LINE L1 6745 6907 -69 3 857 1529 181 78 28 chr15 35767554 35767913 -67727061 + RLTR19-int LTR ERVK 1636 2012 -4125 3 857 203 103 0 25 chr15 35768554 35768594 -67726380 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 857 213 121 0 0 chr15 35770359 35770392 -67724582 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 3 857 21 0 0 0 chr15 35770394 35770415 -67724559 + GC_rich Low_complexity Low_complexity 1 21 0 3 857 1258 42 0 0 chr15 35770415 35770557 -67724417 - B1_Mus1 SINE Alu -6 142 1 3 857 278 26 0 25 chr15 35774610 35774650 -67720324 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 857 197 65 0 31 chr15 35775267 35775299 -67719675 + (GGA)n Simple_repeat Simple_repeat 1 31 0 3 857 555 16 0 0 chr15 35776045 35776109 -67718865 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 857 234 295 221 9 chr15 35777703 35777816 -67717158 - B3A SINE B2 -3 195 59 3 857 337 306 40 26 chr15 35778777 35778797 -67716177 - YREP_Mm Unknown Unknown -1473 339 187 3 857 660 209 30 15 chr15 35778797 35778928 -67716046 + ID_B1 SINE B4 82 214 -10 3 857 878 245 32 37 chr15 35780144 35780360 -67714614 - B3 SINE B2 0 216 2 3 857 270 274 94 24 chr15 35780733 35780860 -67714114 - Cheshire DNA MER1_type -2204 216 81 3 857 1015 203 58 19 chr15 35780866 35781072 -67713902 + B3 SINE B2 3 216 0 3 857 204 122 0 0 chr15 35781880 35781921 -67713053 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 107 8582 42 1 2 chr15 35782033 35783680 -67711294 - L1Md_F2 LINE L1 0 6582 4937 3 858 2065 156 76 8 chr15 35784575 35784757 -67710217 + MTB_Mm LTR MaLR 1 194 -213 3 858 4177 46 6 2 chr15 35784757 35785241 -67709733 + L1Md_F2 LINE L1 6097 6582 0 3 858 2065 156 76 8 chr15 35785241 35785439 -67709535 + MTB_Mm LTR MaLR 195 407 0 3 858 243 250 58 0 chr15 35785443 35785495 -67709479 - MER63D DNA AcHobo -697 364 310 3 858 240 220 34 0 chr15 35785903 35785962 -67709012 + L1MEb LINE L1 94 154 -6046 3 858 258 250 120 70 chr15 35785998 35786140 -67708834 + L1MEb LINE L1 327 475 -5619 3 858 258 372 72 52 chr15 35786385 35786538 -67708436 + MLT1E3 LTR MaLR 77 232 -392 3 858 266 266 0 0 chr15 35786808 35786872 -67708102 - MLT1F-int LTR MaLR -733 756 693 3 858 532 331 45 20 chr15 35786960 35787207 -67707767 - MLT1F-int LTR MaLR -995 494 242 3 858 446 88 0 14 chr15 35787471 35787540 -67707434 + (TAA)n Simple_repeat Simple_repeat 2 69 0 3 858 573 169 15 7 chr15 35787540 35787559 -67707415 + polypurine Low_complexity Low_complexity 2 20 0 3 858 1082 114 39 39 chr15 35787559 35787741 -67707233 + B2_Mm2 SINE B2 5 186 -9 3 858 573 169 15 7 chr15 35787741 35787834 -67707140 + polypurine Low_complexity Low_complexity 21 114 0 3 858 1128 91 11 6 chr15 35787834 35788011 -67706963 + (GAA)n Simple_repeat Simple_repeat 3 180 0 3 858 573 169 15 7 chr15 35788011 35788034 -67706940 + polypurine Low_complexity Low_complexity 115 137 0 3 858 1025 323 126 21 chr15 35788037 35788458 -67706516 - MLT1F LTR MaLR -77 471 7 3 858 417 298 83 0 chr15 35788462 35788583 -67706391 + B4A SINE B4 150 280 -12 3 858 246 32 0 0 chr15 35788588 35788619 -67706355 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 858 2204 185 78 24 chr15 35788657 35789155 -67705819 - RLTR11A2 LTR ERVK -2 525 1 3 858 337 363 114 5 chr15 35789767 35789969 -67705005 - MLT1H LTR MaLR -203 346 123 3 858 453 36 0 0 chr15 35790276 35790331 -67704643 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 858 193 97 32 0 chr15 35793214 35793245 -67701729 - L3 LINE CR1 -2165 2324 2293 3 858 3502 66 34 0 chr15 35793597 35794038 -67700936 - Lx3_Mus LINE L1 0 7009 6554 3 858 432 76 21 42 chr15 35797486 35797582 -67697392 + (TTTTG)n Simple_repeat Simple_repeat 3 96 0 3 858 204 158 0 0 chr15 35797687 35797725 -67697249 + A-rich Low_complexity Low_complexity 1 38 0 3 858 180 0 0 0 chr15 35799252 35799272 -67695702 + (T)n Simple_repeat Simple_repeat 1 20 0 3 858 1022 53 0 0 chr15 35799272 35799405 -67695569 - B1_Mus1 SINE Alu 0 148 16 3 858 182 388 30 36 chr15 35800804 35800970 -67694004 - L3 LINE CR1 -60 4429 4265 3 858 324 232 116 74 chr15 35802902 35803023 -67691951 + B3 SINE B2 85 210 -6 3 858 525 249 107 24 chr15 35803162 35803331 -67691643 + B3A SINE B2 13 195 -3 3 858 480 297 120 58 chr15 35803816 35804245 -67690729 - MLT2B4 LTR ERVL -6 458 1 3 858 254 308 0 0 chr15 35804344 35804409 -67690565 + ID4_ SINE ID 1 65 -18 3 858 180 163 0 0 chr15 35805707 35805750 -67689224 + A-rich Low_complexity Low_complexity 1 43 0 3 858 246 271 0 0 chr15 35806875 35806923 -67688051 + polypurine Low_complexity Low_complexity 2 49 0 3 858 252 77 0 0 chr15 35806964 35807003 -67687971 + (T)n Simple_repeat Simple_repeat 1 39 0 3 858 1420 60 5 52 chr15 35807026 35807220 -67687754 + B2_Mm2 SINE B2 2 186 -9 3 858 1908 58 4 0 chr15 35807471 35807696 -67687278 + L1_Mus2 LINE L1 6341 6566 0 3 858 279 173 0 0 chr15 35807700 35807752 -67687222 + A-rich Low_complexity Low_complexity 1 52 0 3 858 733 292 159 25 chr15 35807786 35808106 -67686868 - MTEa LTR MaLR -14 365 3 3 858 228 143 0 0 chr15 35810367 35810409 -67684565 + (TC)n Simple_repeat Simple_repeat 2 43 0 3 858 466 331 125 29 chr15 35810413 35810790 -67684184 - Lx8 LINE L1 -247 7226 6814 3 858 324 147 26 13 chr15 35811246 35811322 -67683652 + G-rich Low_complexity Low_complexity 4 80 0 3 858 302 170 321 0 chr15 35811352 35811458 -67683516 - Charlie1 DNA MER1_type -6 2775 2636 3 858 476 296 64 12 chr15 35811440 35811611 -67683363 - Charlie1 DNA MER1_type -2545 236 57 3 858 813 132 397 0 chr15 35812278 35812429 -67682545 + B3 SINE B2 1 211 -5 3 858 329 304 26 26 chr15 35812461 35812576 -67682398 + PB1D10 SINE Alu 2 116 -1 3 858 189 0 0 0 chr15 35812851 35812872 -67682102 + (T)n Simple_repeat Simple_repeat 1 21 0 3 858 341 326 100 20 chr15 35813640 35813790 -67681184 + RSINE1 SINE B4 3 164 -1 4 858 334 95 15 31 chr15 35817182 35817247 -67677727 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 4 858 424 338 47 0 chr15 35817391 35817539 -67677435 + RSINE1 SINE B4 3 157 -8 4 858 660 111 0 0 chr15 35817555 35817654 -67677320 + (GGAA)n Simple_repeat Simple_repeat 1 99 0 4 858 238 233 66 40 chr15 35818071 35818147 -67676827 - ORR1E LTR MaLR -12 347 270 4 858 539 234 105 32 chr15 35818504 35818694 -67676280 - L1MB4 LINE L1 -175 6005 5802 4 858 7744 86 14 1 chr15 35819164 35820957 -67674017 - L1_Mus2 LINE L1 0 6566 4749 4 858 251 225 88 5 chr15 35821688 35821775 -67673199 - RMER17B LTR ERVK -126 284 194 4 858 1027 125 6 11 chr15 35821775 35821953 -67673021 + (GGAGA)n Simple_repeat Simple_repeat 1 177 0 4 858 463 159 61 89 chr15 35821953 35822204 -67672770 - RMER17B LTR ERVK -520 438 67 4 858 6600 66 32 1 chr15 35822204 35823022 -67671952 - Lx3_Mus LINE L1 0 7009 6167 4 858 463 182 243 16 chr15 35823022 35823115 -67671859 - RMER17B LTR ERVK -661 297 172 4 858 314 336 97 0 chr15 35824298 35824411 -67670563 - B4A SINE B4 -75 217 94 4 858 1502 40 85 0 chr15 35824538 35824554 -67670420 - B2_Mm1a SINE B2 -1 192 177 4 858 222 37 0 0 chr15 35824554 35824581 -67670393 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 4 858 1502 40 85 0 chr15 35824581 35824741 -67670233 - B2_Mm1a SINE B2 -17 176 2 4 858 1287 130 20 0 chr15 35825038 35825238 -67669736 + URR1B DNA MER1_type 22 225 0 4 858 672 294 217 29 chr15 35825249 35825691 -67669283 - L3 LINE CR1 -275 4214 3690 4 858 321 26 0 0 chr15 35825696 35825734 -67669240 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 4 858 6293 77 8 0 chr15 35825740 35826517 -67668457 - L1_Mus3 LINE L1 -9 6629 5847 4 858 1236 48 7 0 chr15 35826533 35826679 -67668295 + B1_Mus1 SINE Alu 1 147 -1 4 858 269 379 9 0 chr15 35826731 35826847 -67668127 - L3 LINE CR1 -838 3651 3535 4 858 229 347 79 11 chr15 35827446 35827624 -67667350 + L2 LINE L2 2263 2452 -967 4 858 672 286 82 0 chr15 35827639 35827810 -67667164 - RMER30 DNA MER1_type -16 186 2 4 858 497 275 49 0 chr15 35828175 35828317 -67666657 + ID_B1 SINE B4 76 224 0 4 858 313 343 93 0 chr15 35828346 35828454 -67666520 + ID_B1 SINE B4 87 204 -20 4 858 1288 48 0 0 chr15 35828696 35828843 -67666131 + B1_Mus2 SINE Alu 1 147 0 4 858 468 0 0 0 chr15 35828936 35828988 -67665986 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 858 737 208 104 0 chr15 35829119 35829311 -67665663 + MTD LTR MaLR 1 212 -207 4 858 366 23 0 0 chr15 35829372 35829415 -67665559 + (TC)n Simple_repeat Simple_repeat 1 43 0 4 858 283 96 19 19 chr15 35829487 35829534 -67665440 + (GA)n Simple_repeat Simple_repeat 2 49 0 4 858 486 49 0 0 chr15 35829534 35829595 -67665379 + (TGGA)n Simple_repeat Simple_repeat 2 62 0 4 858 376 207 15 8 chr15 35829618 35829711 -67665263 + MTD LTR MaLR 294 404 -15 4 858 27 62 0 0 chr15 35830110 35830158 -67664816 + AT_rich Low_complexity Low_complexity 1 48 0 4 858 285 249 139 35 chr15 35830380 35830503 -67664471 - MTEa LTR MaLR -4 375 236 4 858 274 330 82 39 chr15 35830747 35830955 -67664019 - MLT1A0-int LTR MaLR -272 1115 899 4 858 690 269 13 6 chr15 35831292 35831449 -67663525 - MLT1A0 LTR MaLR -4 361 204 4 858 2274 79 70 26 chr15 35831514 35831827 -67663147 + ORR1A2 LTR MaLR 1 327 0 4 858 1136 233 48 54 chr15 35833376 35833487 -67661487 - ORR1D1 LTR MaLR 0 374 268 4 858 465 19 0 0 chr15 35833487 35833541 -67661433 + (CATAC)n Simple_repeat Simple_repeat 1 54 0 4 858 1136 233 48 54 chr15 35833541 35833764 -67661210 - ORR1D1 LTR MaLR -107 267 42 4 858 208 226 0 0 chr15 35834572 35834625 -67660349 + T-rich Low_complexity Low_complexity 3 55 0 4 858 421 307 63 29 chr15 35835559 35835797 -67659177 + B4A SINE B4 1 246 -46 4 858 351 305 48 0 chr15 35835805 35835910 -67659064 + RSINE1 SINE B4 39 148 -17 4 858 973 147 41 0 chr15 35836271 35836441 -67658533 + URR1B DNA MER1_type 44 220 -5 4 858 1108 37 0 36 chr15 35836490 35836629 -67658345 + B1_Mus2 SINE Alu 1 134 -13 4 858 440 325 57 4 chr15 35837809 35838038 -67656936 - L2 LINE L2 -1412 2007 1767 4 858 405 0 0 0 chr15 35843066 35843111 -67651863 + (ATTG)n Simple_repeat Simple_repeat 4 48 0 4 858 387 60 0 0 chr15 35844115 35844165 -67650809 + (CTG)n Simple_repeat Simple_repeat 3 52 0 4 858 340 217 7 7 chr15 35845739 35845878 -67649096 + (TG)n Simple_repeat Simple_repeat 2 140 0 4 858 1237 55 0 0 chr15 35846312 35846457 -67648517 + B1_Mm SINE Alu 2 146 -1 4 858 201 39 0 0 chr15 35848079 35848105 -67646869 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 858 1176 49 0 14 chr15 35848105 35848242 -67646732 - B1_Mus2 SINE Alu -8 139 3 4 858 224 271 71 0 chr15 35848274 35848344 -67646630 + MIRc SINE MIR 85 159 -109 4 858 326 235 25 0 chr15 35852098 35852179 -67642795 + MIR SINE MIR 40 122 -140 4 858 599 318 30 15 chr15 35852358 35852629 -67642345 + B4A SINE B4 8 282 -10 4 858 37 39 0 0 chr15 35853343 35853394 -67641580 + AT_rich Low_complexity Low_complexity 1 51 0 4 858 1062 114 28 22 chr15 35854696 35854875 -67640099 - URR1B DNA MER1_type 0 225 46 4 858 1174 57 0 0 chr15 35856310 35856451 -67638523 + B1_Mus2 SINE Alu 2 142 -5 4 858 239 252 93 87 chr15 35861443 35861555 -67633419 - B1F SINE Alu -11 138 26 4 858 408 217 151 82 chr15 35862006 35862468 -67632506 + L1M3 LINE L1 4035 4628 -1512 4 858 1221 28 7 0 chr15 35862471 35862616 -67632358 + B1_Mus2 SINE Alu 2 147 0 4 858 565 272 100 25 chr15 35862755 35862955 -67632019 + B4A SINE B4 3 217 -75 4 858 270 0 0 0 chr15 35862972 35863002 -67631972 + (CAA)n Simple_repeat Simple_repeat 1 30 0 4 858 380 254 34 8 chr15 35863019 35863138 -67631836 + L1M3 LINE L1 4878 4999 -1147 4 858 906 178 146 10 chr15 35863150 35863349 -67631625 - URR1A DNA MER1_type 0 226 1 4 858 315 354 38 23 chr15 35863700 35863833 -67631141 + B4A SINE B4 158 292 0 4 858 322 188 98 10 chr15 35863858 35863960 -67631014 + L1M3 LINE L1 5351 5461 -719 4 858 750 146 29 0 chr15 35863979 35864116 -67630858 + Lx LINE L1 6514 6654 0 4 858 234 208 0 0 chr15 35864152 35864205 -67630769 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 858 263 267 17 0 chr15 35864211 35864271 -67630703 + ID4_ SINE ID 10 70 -13 4 858 282 90 41 38 chr15 35864276 35864333 -67630641 + L1M3 LINE L1 5786 5844 -336 4 858 860 206 214 29 chr15 35864333 35864678 -67630296 + RLTR9E LTR ERVK 1 409 0 4 858 264 134 191 24 chr15 35864678 35864704 -67630270 + L1M3 LINE L1 5845 5882 -298 4 858 328 309 0 50 chr15 35864712 35864811 -67630163 + RSINE1 SINE B4 3 96 -69 4 858 1051 71 0 0 chr15 35865435 35865576 -67629398 + B2_Mm2 SINE B2 1 141 -54 4 858 384 310 135 24 chr15 35866311 35866711 -67628263 + MLT2B2 LTR ERVL 1 445 -156 4 858 683 158 184 17 chr15 35869350 35869524 -67625450 + RMER6D LTR ERVK 1 203 -517 4 858 981 248 241 37 chr15 35869505 35869970 -67625004 - RMER2 LTR ERV1 -4 563 4 4 858 2237 146 126 14 chr15 35869976 35870113 -67624861 + RMER6D LTR ERVK 182 332 -388 4 858 2090 134 25 11 chr15 35870113 35870476 -67624498 - RLTR9A LTR ERVK 0 368 1 4 858 2237 146 126 14 chr15 35870476 35870823 -67624151 + RMER6D LTR ERVK 333 720 0 4 858 318 294 109 0 chr15 35871044 35871204 -67623770 - L1M3 LINE L1 -2460 3680 3474 4 858 400 305 65 37 chr15 35871223 35871468 -67623506 - L1_Rod LINE L1 -2389 3458 3207 4 858 637 115 215 0 chr15 35871488 35871618 -67623356 + RLTR47_MM LTR ERV1 55 212 -320 4 858 433 150 161 70 chr15 35871618 35871761 -67623213 + RLTR47_MM LTR ERV1 377 532 0 4 858 1052 194 92 67 chr15 35871761 35872117 -67622857 - RLTR21 LTR ERVK -491 1081 717 4 858 1124 118 5 31 chr15 35872118 35872277 -67622697 + B2_Mm1a SINE B2 1 160 -33 4 858 351 0 0 0 chr15 35872277 35872316 -67622658 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 4 858 1124 118 5 31 chr15 35872316 35872348 -67622626 + B2_Mm1a SINE B2 161 187 -6 4 858 2580 211 89 62 chr15 35872326 35873035 -67621939 - RLTR21 LTR ERVK -844 728 1 4 858 1075 178 9 32 chr15 35873114 35873207 -67621767 + B3 SINE B2 1 93 -123 4 858 2743 66 148 140 chr15 35873207 35873715 -67621259 - RLTR1B LTR ERV1 0 512 1 4 858 1075 178 9 32 chr15 35873715 35873841 -67621133 + B3 SINE B2 94 215 -1 4 858 2146 175 246 12 chr15 35873855 35874546 -67620428 + RLTR25B LTR ERVK 1 853 -175 4 858 369 242 60 149 chr15 35874641 35875048 -67619926 + RLTR25A LTR ERVK 733 1103 0 4 858 852 145 20 14 chr15 35875185 35875332 -67619642 - B1_Mur3 SINE Alu 0 149 2 4 858 535 237 93 16 chr15 35875446 35875639 -67619335 - MLT1D LTR MaLR 0 505 298 4 858 380 214 112 117 chr15 35875640 35875846 -67619128 - RLTR23 LTR ERV1 0 430 226 4 858 429 47 62 0 chr15 35876008 35876072 -67618902 - RMER16 LTR ERVK 0 533 466 4 858 923 56 85 23 chr15 35876072 35876201 -67618773 + B1_Mus2 SINE Alu 2 138 -9 4 858 279 0 0 0 chr15 35876201 35876232 -67618742 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 858 523 191 98 0 chr15 35876235 35876378 -67618596 - RMER16 LTR ERVK -332 201 3 4 858 365 219 37 0 chr15 35876378 35876453 -67618521 - RLTR23 LTR ERV1 -350 80 3 4 858 269 254 86 78 chr15 35876510 35876638 -67618336 - MLT1A1 LTR MaLR -19 389 261 4 858 216 0 0 0 chr15 35876945 35876969 -67618005 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 4 858 4809 52 7 0 chr15 35877057 35877639 -67617335 - LTRIS_Mus LTR ERV1 0 587 2 4 858 1518 63 5 0 chr15 35877647 35877838 -67617136 - B2_Mm1t SINE B2 0 193 2 4 858 312 230 66 26 chr15 35877982 35878058 -67616916 - ID4 SINE ID -1 82 4 4 858 273 295 72 24 chr15 35878063 35878169 -67616805 + MLT1I LTR MaLR 77 188 -223 4 858 3848 62 16 8 chr15 35878169 35878672 -67616302 - LTRIS4 LTR ERV1 0 507 1 4 858 273 295 72 24 chr15 35878672 35878690 -67616284 + MLT1I LTR MaLR 189 206 -205 4 858 1385 188 95 44 chr15 35878860 35879130 -67615844 + ORR1B1 LTR MaLR 54 347 -47 4 858 1055 101 0 0 chr15 35879130 35879268 -67615706 + B1_Mus1 SINE Alu 1 138 -10 4 858 387 0 0 0 chr15 35879269 35879312 -67615662 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 4 858 1385 188 95 44 chr15 35879312 35879356 -67615618 + ORR1B1 LTR MaLR 348 386 -8 4 858 1047 268 76 47 chr15 35879371 35879778 -67615196 + MTD LTR MaLR 1 419 0 4 858 770 216 109 92 chr15 35880024 35880419 -67614555 - MT2A LTR ERVL -43 558 1 4 858 1292 174 177 38 chr15 35880864 35881180 -67613794 - ORR1B2 LTR MaLR 0 367 8 4 858 626 252 13 0 chr15 35881510 35881661 -67613313 + B3A SINE B2 1 153 -45 4 858 665 251 101 15 chr15 35882488 35882686 -67612288 + B3 SINE B2 1 215 -1 5 858 2182 134 19 0 chr15 35883406 35883726 -67611248 - ORR1A3 LTR MaLR 0 326 1 5 858 677 161 88 25 chr15 35883731 35883890 -67611084 - ORR1C2 LTR MaLR -42 342 174 5 858 321 68 0 0 chr15 35883890 35883934 -67611040 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 858 708 153 39 69 chr15 35883936 35884127 -67610847 + RMER17C LTR ERVK 3 191 -219 5 858 714 75 0 0 chr15 35884127 35884233 -67610741 + (TC)n Simple_repeat Simple_repeat 1 106 0 5 858 708 153 39 69 chr15 35884233 35884244 -67610730 + RMER17C LTR ERVK 192 199 -211 5 858 2057 132 250 11 chr15 35884288 35884648 -67610326 - RLTR41 LTR ERV1 0 446 1 5 858 341 312 78 45 chr15 35885243 35885511 -67609463 - MMERGLN-int LTR ERV1 -1991 5610 5334 5 858 219 36 0 0 chr15 35885513 35885541 -67609433 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 5 858 1124 88 0 7 chr15 35885550 35885698 -67609276 - B1_Mus2 SINE Alu 0 147 1 5 858 6540 71 79 67 chr15 35885789 35886800 -67608174 + L1_Mus3 LINE L1 5610 6632 -6 5 858 1123 257 42 35 chr15 35886803 35887089 -67607885 - MuRRS4-int LTR ERV1 -1068 3995 3708 5 858 346 212 18 5 chr15 35887099 35887193 -67607781 - MMERGLN-int LTR ERV1 -2794 4984 4912 5 858 592 299 99 71 chr15 35887486 35887982 -67606992 - MMERGLN-int LTR ERV1 -3026 4530 3970 5 858 1249 311 65 71 chr15 35888066 35889297 -67605677 - MMERGLN-int LTR ERV1 -5136 2420 1197 5 858 265 359 84 32 chr15 35889694 35889884 -67605090 - MMERGLN-int LTR ERV1 -6747 809 610 5 858 234 0 0 0 chr15 35889885 35889911 -67605063 + (T)n Simple_repeat Simple_repeat 1 26 0 5 858 3022 138 9 2 chr15 35890436 35890879 -67604095 - RLTR41 LTR ERV1 0 446 1 5 858 715 90 8 32 chr15 35890879 35891005 -67603969 + RMER17C LTR ERVK 288 410 0 5 858 536 111 303 113 chr15 35891005 35891144 -67603830 - ORR1C2 LTR MaLR -213 171 6 5 858 270 116 0 0 chr15 35891238 35891281 -67603693 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 858 1378 226 8 4 chr15 35891347 35891613 -67603361 + Lx5 LINE L1 6554 6820 -230 5 858 573 253 86 0 chr15 35891625 35891787 -67603187 + Lx5 LINE L1 6875 7050 0 5 858 1066 78 43 0 chr15 35892411 35892552 -67602422 + B1_Mus2 SINE Alu 1 147 0 5 858 237 340 106 26 chr15 35892696 35892847 -67602127 - RMER13A LTR ERVK 0 860 698 5 858 1057 245 93 35 chr15 35892989 35893332 -67601642 - RMER13A LTR ERVK -399 461 99 5 858 1741 168 62 8 chr15 35893467 35893840 -67601134 - RMER10A LTR ERVL -49 393 1 5 858 311 277 43 0 chr15 35893968 35894062 -67600912 - MER58A DNA MER1_type -79 145 48 5 858 1318 164 97 102 chr15 35894081 35894442 -67600532 + ORR1B2 LTR MaLR 9 367 0 5 858 313 82 0 0 chr15 35894448 35894497 -67600477 + RLTR12B LTR ERVK 1 49 -479 5 858 6746 172 46 13 chr15 35894538 35895766 -67599208 - Lx5 LINE L1 0 7050 5783 5 858 8105 66 4 27 chr15 35895767 35896669 -67598305 - L1_Mus4 LINE L1 -2 6634 5754 5 858 633 61 0 0 chr15 35896669 35896751 -67598223 + (TTTC)n Simple_repeat Simple_repeat 3 84 0 5 858 1217 48 0 0 chr15 35896752 35896897 -67598077 - B1_Mus2 SINE Alu -2 145 1 5 858 8105 138 35 54 chr15 35896897 35897213 -67597761 - L1_Mus4 LINE L1 -913 6084 5587 5 858 944 83 105 0 chr15 35897213 35897346 -67597628 - B1_Mus2 SINE Alu 0 147 1 5 858 4043 101 3 5 chr15 35897346 35897715 -67597259 - Lx2 LINE L1 -1200 5797 5424 5 858 1229 171 94 66 chr15 35897715 35897864 -67597110 - RLTR20B3 LTR ERVK -191 369 196 5 858 1260 67 0 0 chr15 35897864 35898044 -67596930 + (TCC)n Simple_repeat Simple_repeat 1 180 0 5 858 1229 168 78 55 chr15 35898044 35898249 -67596725 - RLTR20B3 LTR ERVK -372 205 2 5 858 5903 105 21 1 chr15 35898249 35899116 -67595858 - Lx2 LINE L1 -480 5397 4514 5 858 30991 100 16 13 chr15 35899136 35904590 -67590384 - L1_Mus2 LINE L1 0 6566 1169 5 858 1009 95 0 87 chr15 35904590 35904751 -67590223 - B1_Mus1 SINE Alu 0 148 2 5 858 2851 161 43 12 chr15 35904751 35905258 -67589716 - L1_Mus2 LINE L1 -5423 1193 670 5 858 7774 84 52 40 chr15 35905279 35906203 -67588771 - Lx2 LINE L1 -1353 4524 3586 5 858 838 129 50 7 chr15 35906203 35906343 -67588631 - B1_Mus2 SINE Alu -1 146 1 5 858 7774 84 52 40 chr15 35906343 35906633 -67588341 - Lx2 LINE L1 -2292 3585 3295 5 858 801 62 9 0 chr15 35906674 35906786 -67588188 - B1_Mm SINE Alu 0 147 35 5 858 360 0 0 0 chr15 35906790 35906830 -67588144 + (TTTTG)n Simple_repeat Simple_repeat 3 42 0 5 858 727 97 35 0 chr15 35906831 35906944 -67588030 - L1_Mur2 LINE L1 -3711 2166 2050 5 858 773 167 43 0 chr15 35906982 35907120 -67587854 - Lx2 LINE L1 -3069 2808 2665 5 858 4791 102 59 39 chr15 35907102 35907799 -67587175 - Lx2 LINE L1 -3810 2067 1359 5 858 1378 92 0 15 chr15 35907799 35907997 -67586977 + B2_Mm2 SINE B2 1 195 0 5 858 4791 161 92 25 chr15 35907997 35908667 -67586307 - Lx2 LINE L1 -4519 1358 579 5 858 11095 128 43 31 chr15 35908668 35910087 -67584887 - L1_Mur2 LINE L1 -2401 3476 2055 5 858 422 36 18 0 chr15 35910087 35910143 -67584831 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 858 11095 128 43 31 chr15 35910143 35910743 -67584231 - L1_Mur2 LINE L1 -3823 2054 1434 5 858 214 205 0 0 chr15 35911173 35911212 -67583762 + A-rich Low_complexity Low_complexity 1 39 0 5 858 394 267 133 0 chr15 35911251 35911356 -67583618 + RSINE1 SINE B4 16 134 -31 5 858 1099 148 16 5 chr15 35911648 35911832 -67583142 - B2_Mm2 SINE B2 -7 188 3 5 858 432 37 0 0 chr15 35911835 35911889 -67583085 + (TTA)n Simple_repeat Simple_repeat 1 54 0 5 858 246 116 0 0 chr15 35911890 35911933 -67583041 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 858 273 122 0 0 chr15 35912042 35912091 -67582883 - B1_Mus1 SINE Alu -99 49 1 5 858 850 173 229 12 chr15 35912113 35912283 -67582691 - B3 SINE B2 -6 210 4 5 858 640 217 84 30 chr15 35912348 35912514 -67582460 - B3 SINE B2 -3 213 39 5 858 2122 183 66 60 chr15 35912743 35913289 -67581685 + RMER15 LTR ERVL 22 570 -5 5 859 441 36 0 0 chr15 35913748 35913803 -67581171 + (GA)n Simple_repeat Simple_repeat 1 55 0 5 859 533 194 0 0 chr15 35915041 35915134 -67579840 + B1_Mur3 SINE Alu 2 94 -55 5 859 473 182 38 53 chr15 35915462 35915595 -67579379 + RLTR23 LTR ERV1 291 421 -9 5 859 254 75 25 0 chr15 35915594 35915634 -67579340 + B1_Mus2 SINE Alu 107 147 0 5 859 587 189 158 0 chr15 35916215 35916342 -67578632 + B1_Mus2 SINE Alu 1 147 0 5 859 358 290 118 0 chr15 35916518 35916611 -67578363 + B3A SINE B2 60 163 -35 5 859 180 0 0 0 chr15 35916616 35916636 -67578338 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 859 1932 167 79 28 chr15 35916970 35917402 -67577572 - RMER16 LTR ERVK -10 523 70 5 859 505 247 159 41 chr15 35917534 35917768 -67577206 + RMER21B LTR ERV1 275 539 -303 5 859 4081 50 28 4 chr15 35917768 35918268 -67576706 + RLTR1B LTR ERV1 1 512 0 5 859 505 247 159 41 chr15 35918268 35918303 -67576671 + RMER21B LTR ERV1 540 576 -266 5 859 225 0 0 0 chr15 35918510 35918535 -67576439 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 859 586 212 0 0 chr15 35918553 35918652 -67576322 - B1_Mur2 SINE Alu -49 100 2 5 859 811 258 47 5 chr15 35918687 35918878 -67576096 + B3 SINE B2 3 201 -15 5 859 221 0 35 0 chr15 35918986 35919015 -67575959 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 859 27 0 0 0 chr15 35919016 35919043 -67575931 + AT_rich Low_complexity Low_complexity 1 27 0 5 859 207 0 0 0 chr15 35919043 35919066 -67575908 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 859 198 167 0 0 chr15 35919178 35919214 -67575760 + (CATA)n Simple_repeat Simple_repeat 1 36 0 5 859 872 184 103 72 chr15 35919247 35919470 -67575504 - ORR1B1 LTR MaLR -124 270 41 5 859 1226 61 0 0 chr15 35919517 35919664 -67575310 - B1_Mus2 SINE Alu 0 147 1 5 859 1637 32 11 0 chr15 35920000 35920188 -67574786 - B2_Mm1a SINE B2 -2 191 2 5 859 38964 12 3 7 chr15 35921149 35926557 -67568417 + L1Md_A LINE L1 205 5586 -297 5 859 8982 14 0 0 chr15 35926557 35927553 -67567421 + L1Md_A LINE L1 5587 6582 0 5 859 213 328 62 0 chr15 35928752 35928816 -67566158 - PB1D7 SINE Alu -32 88 21 5 859 1116 72 0 0 chr15 35929152 35929291 -67565683 + B1_Mus1 SINE Alu 5 143 -5 5 859 217 0 29 29 chr15 35929295 35929329 -67565645 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 859 324 0 0 0 chr15 35930465 35930501 -67564473 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 859 180 77 0 0 chr15 35930537 35930563 -67564411 + (T)n Simple_repeat Simple_repeat 1 26 0 5 859 695 267 74 0 chr15 35930565 35930767 -67564207 - ID_B1 SINE B4 0 224 8 5 859 274 234 144 10 chr15 35931151 35931345 -67563629 + Lx8 LINE L1 6969 7206 -267 5 859 220 120 135 39 chr15 35931978 35932030 -67562944 + PB1D9 SINE Alu 3 59 -61 5 859 254 0 0 159 chr15 35932031 35932157 -67562817 + (CAGAG)n Simple_repeat Simple_repeat 5 110 0 5 859 374 148 0 109 chr15 35932160 35932293 -67562681 + B1_Mur2 SINE Alu 42 148 -1 5 859 439 256 68 53 chr15 35932652 35932842 -67562132 - MTE2b LTR MaLR -46 333 141 5 859 2461 43 37 0 chr15 35932847 35933173 -67561801 - ORR1A1 LTR MaLR -8 338 1 5 859 1194 178 94 80 chr15 35934136 35934537 -67560437 + RMER16 LTR ERVK 1 533 0 5 859 357 339 49 11 chr15 35934560 35934745 -67560229 + L1MCa LINE L1 2 193 -6315 5 859 226 0 0 56 chr15 35934843 35934879 -67560095 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 859 694 285 84 0 chr15 35934883 35935062 -67559912 - B3 SINE B2 -13 203 10 5 859 204 125 0 59 chr15 35935210 35935261 -67559713 + T-rich Low_complexity Low_complexity 5 52 0 5 859 278 274 16 0 chr15 35935309 35935371 -67559603 + L1MCa LINE L1 659 721 -5787 5 859 1226 54 0 0 chr15 35935455 35935602 -67559372 + B1_Mus2 SINE Alu 1 147 0 5 859 222 105 0 0 chr15 35935606 35935644 -67559330 + (A)n Simple_repeat Simple_repeat 1 38 0 5 859 3760 101 36 9 chr15 35935874 35936423 -67558551 + LTRIS2 LTR ERV1 1 564 0 5 859 900 166 0 7 chr15 35936476 35936622 -67558352 + B1_Mus1 SINE Alu 2 146 -2 5 859 1637 239 89 21 chr15 35936638 35937112 -67557862 - RMER20A LTR ERVK 0 516 11 5 859 345 312 66 52 chr15 35937112 35937325 -67557649 + L1MCa LINE L1 951 1166 -5342 5 859 556 195 180 21 chr15 35937414 35937444 -67557530 + L1MCa LINE L1 1623 1648 -4860 5 859 1491 213 132 125 chr15 35937444 35938051 -67556923 - RMER19C LTR ERVK 0 611 1 5 859 556 195 180 21 chr15 35938051 35938214 -67556760 + L1MCa LINE L1 1649 1846 -4662 5 859 270 0 0 0 chr15 35940592 35940622 -67554352 + (A)n Simple_repeat Simple_repeat 1 30 0 5 859 545 274 14 14 chr15 35940751 35940899 -67554075 + B1F SINE Alu 1 148 -1 5 859 2906 68 8 0 chr15 35941422 35941802 -67553172 - L1_Mus3 LINE L1 -5 6633 6251 5 859 1049 123 0 6 chr15 35941834 35942005 -67552969 + (CCA)n Simple_repeat Simple_repeat 1 170 0 5 859 224 281 58 24 chr15 35942540 35942627 -67552347 + ID4_ SINE ID 1 87 -65 5 859 270 73 0 0 chr15 35943627 35943668 -67551306 + (T)n Simple_repeat Simple_repeat 1 41 0 6 859 1287 48 0 0 chr15 35943668 35943815 -67551159 - B1_Mm SINE Alu 0 147 1 6 859 320 182 515 0 chr15 35943919 35944075 -67550899 - B4 SINE B4 -1 291 56 6 859 496 292 48 36 chr15 35944418 35944585 -67550389 + B3A SINE B2 28 196 -2 6 859 372 193 0 0 chr15 35944927 35945036 -67549938 + CT-rich Low_complexity Low_complexity 2 110 0 6 859 605 25 13 0 chr15 35945036 35945115 -67549859 + (CA)n Simple_repeat Simple_repeat 1 80 0 6 859 1114 320 64 38 chr15 35946562 35947178 -67547796 + Lx8 LINE L1 6754 7409 -64 6 859 310 42 42 0 chr15 35947244 35947292 -67547682 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 6 859 29909 125 27 2 chr15 35947689 35950603 -67544371 + L1_Mus3 LINE L1 675 3641 -2242 6 859 198 0 0 0 chr15 35950603 35950625 -67544349 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 859 29909 107 29 1 chr15 35950625 35953495 -67541479 + L1_Mus3 LINE L1 3642 6624 -14 6 859 629 85 21 0 chr15 35953495 35953589 -67541385 + URR1B DNA MER1_type 129 224 -1 6 859 215 31 0 30 chr15 35953620 35953653 -67541321 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 6 859 252 261 67 11 chr15 35956678 35956767 -67538207 - ORR1D2 LTR MaLR -230 140 47 6 859 270 0 0 0 chr15 35956935 35956965 -67538009 + (T)n Simple_repeat Simple_repeat 1 30 0 6 859 21 0 0 0 chr15 35957307 35957328 -67537646 + AT_rich Low_complexity Low_complexity 1 21 0 6 859 722 171 46 15 chr15 35957437 35957568 -67537406 - B1_Mur2 SINE Alu -1 148 14 6 859 307 339 48 32 chr15 35958438 35958627 -67536347 + MIR SINE MIR 37 228 -34 6 859 697 211 239 0 chr15 35958667 35958847 -67536127 + 7SK RNA RNA 19 241 -90 6 859 312 276 146 38 chr15 35959099 35959304 -67535670 + MTEb LTR MaLR 104 356 -23 6 859 2242 138 73 38 chr15 35959383 35959781 -67535193 - MTC LTR MaLR -8 413 2 6 859 2892 183 114 72 chr15 35959782 35960875 -67534099 - MTC-int LTR MaLR -54 1316 169 6 859 4051 151 98 48 chr15 35961047 35961711 -67533263 + L1VL1 LINE L1 194 867 -5555 6 859 4593 30 10 0 chr15 35961711 35962220 -67532754 + L1Md_F3 LINE L1 6071 6584 0 6 859 4051 151 98 48 chr15 35962220 35962379 -67532595 + L1VL1 LINE L1 868 1058 -5364 6 859 30672 129 36 6 chr15 35962376 35963807 -67531167 + L1_Mus3 LINE L1 436 1901 -3982 6 859 3623 28 5 0 chr15 35963807 35964201 -67530773 + MTA_Mm LTR MaLR 1 396 0 6 859 30672 111 22 4 chr15 35964201 35967454 -67527520 + L1_Mus3 LINE L1 1902 5234 -649 6 859 207 0 0 0 chr15 35967454 35967477 -67527497 + (TA)n Simple_repeat Simple_repeat 1 23 0 6 859 30672 111 22 4 chr15 35967477 35967910 -67527064 + L1_Mus3 LINE L1 5235 5676 -207 6 859 1111 118 0 0 chr15 35967910 35968054 -67526920 - B1_Mus1 SINE Alu -1 147 4 6 859 30672 82 16 10 chr15 35968054 35969000 -67525974 + L1_Mus3 LINE L1 5677 6631 -7 6 859 2351 95 201 106 chr15 35969658 35970130 -67524844 + MURVY-LTR LTR ERV1 1 517 -2 6 859 326 232 43 0 chr15 35971033 35971102 -67523872 - ID4 SINE ID -5 78 7 6 859 600 170 89 0 chr15 35971120 35971232 -67523742 - B1_Mur1 SINE Alu 0 149 28 6 859 22 88 0 0 chr15 35972032 35972089 -67522885 + AT_rich Low_complexity Low_complexity 1 57 0 6 859 666 35 0 0 chr15 35972804 35972889 -67522085 + (TG)n Simple_repeat Simple_repeat 1 85 0 6 859 534 309 113 15 chr15 35973320 35973586 -67521388 + MER2 DNA MER2_type 7 298 -47 6 859 1224 116 17 0 chr15 35974834 35975015 -67519959 - B2_Mm2 SINE B2 -4 191 8 6 859 483 153 24 0 chr15 35975222 35975307 -67519667 + B1_Mur3 SINE Alu 63 149 0 6 859 359 271 0 48 chr15 35975441 35975565 -67519409 - PB1D9 SINE Alu -1 119 2 6 859 180 0 0 0 chr15 35976137 35976157 -67518817 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 6 859 327 214 58 18 chr15 35976595 35976766 -67518208 + (TCTG)n Simple_repeat Simple_repeat 1 178 0 6 859 641 237 96 0 chr15 35977756 35977891 -67517083 + B1_Mur2 SINE Alu 2 149 0 6 859 404 174 0 42 chr15 35977900 35978020 -67516954 + GA-rich Low_complexity Low_complexity 4 118 0 6 859 3179 40 24 5 chr15 35978994 35979369 -67515605 + L1Md_F2 LINE L1 6201 6582 0 6 859 413 215 44 14 chr15 35980411 35980713 -67514261 + (TA)n Simple_repeat Simple_repeat 1 311 0 6 859 554 294 30 36 chr15 35980818 35980984 -67513990 - B3 SINE B2 -3 213 49 6 859 258 296 49 49 chr15 35981346 35981488 -67513486 - L1ME4a LINE L1 -70 6054 5913 6 859 931 141 0 69 chr15 35981508 35981668 -67513306 - B1_Mur3 SINE Alu 0 149 1 6 859 1444 73 17 6 chr15 35981686 35981865 -67513109 - B2_Mm2 SINE B2 -14 181 1 6 859 236 185 161 36 chr15 35984841 35984897 -67510077 - ID4_ SINE ID -18 65 3 6 859 531 195 71 24 chr15 35984925 35985051 -67509923 + ID_B1 SINE B4 93 224 0 6 859 297 0 0 0 chr15 35985340 35985373 -67509601 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 859 358 20 39 0 chr15 35985373 35985423 -67509551 + (TA)n Simple_repeat Simple_repeat 1 53 0 6 859 2564 292 133 88 chr15 35986848 35988340 -67506634 + L1_Mur3 LINE L1 1472 3182 -2698 6 859 508 329 7 39 chr15 35988340 35988495 -67506479 + B3A SINE B2 1 150 -48 6 859 2564 292 133 88 chr15 35988495 35988611 -67506363 + L1_Mur3 LINE L1 3183 3317 -2563 6 859 441 0 0 0 chr15 35988611 35988660 -67506314 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 859 2564 292 133 88 chr15 35988660 35989258 -67505716 + L1_Mur3 LINE L1 3318 3939 -1941 6 859 606 286 50 62 chr15 35989249 35989570 -67505404 + L1_Mur3 LINE L1 4141 4457 -1423 6 859 242 205 0 0 chr15 35990284 35990323 -67504651 - Lx8 LINE L1 -401 7072 7034 6 859 620 300 11 6 chr15 35990391 35990572 -67504402 + B3 SINE B2 29 210 -6 6 859 22 56 0 0 chr15 35990708 35990744 -67504230 + AT_rich Low_complexity Low_complexity 1 36 0 6 859 1001 145 197 22 chr15 35990771 35990954 -67504020 - B3 SINE B2 0 216 2 6 859 328 323 10 20 chr15 35991766 35991867 -67503107 - PB1D10 SINE Alu -13 104 5 6 859 309 250 16 0 chr15 35992144 35992208 -67502766 + ID4 SINE ID 17 81 -2 6 859 374 281 41 0 chr15 35993373 35993494 -67501480 + L1MA6 LINE L1 6146 6271 -29 6 859 793 162 66 50 chr15 35993882 35994064 -67500910 - B2_Mm2 SINE B2 -1 194 10 6 859 1243 55 0 0 chr15 35994281 35994427 -67500547 + B1_Mus2 SINE Alu 2 147 0 6 859 207 0 0 0 chr15 35994427 35994450 -67500524 + (A)n Simple_repeat Simple_repeat 1 23 0 6 859 678 274 102 8 chr15 35994494 35994748 -67500226 + MER63D DNA AcHobo 2 279 -782 6 859 24 0 0 0 chr15 35996373 35996397 -67498577 + AT_rich Low_complexity Low_complexity 1 24 0 6 859 7860 68 4 5 chr15 35997434 35998627 -67496347 + L1_Mus2 LINE L1 5372 6565 -1 6 859 437 295 197 27 chr15 36000000 36000223 -67494751 + B4A SINE B4 11 271 -21 1 859 256 176 95 0 chr15 36000622 36000696 -67494278 - L1M2 LINE L1 -3318 2825 2745 2 859 254 326 0 0 chr15 36001704 36001793 -67493181 + PB1D10 SINE Alu 27 115 -2 3 859 7005 67 17 4 chr15 36001941 36003610 -67491364 - L1VL2 LINE L1 -1806 1809 117 4 859 224 290 0 127 chr15 36003863 36003942 -67491032 + RSINE1 SINE B4 97 165 0 5 859 23 33 0 0 chr15 36004043 36004073 -67490901 + AT_rich Low_complexity Low_complexity 1 30 0 6 859 234 209 191 0 chr15 36004666 36004771 -67490203 + L1MEd LINE L1 679 803 -5316 7 859 612 27 0 0 chr15 36004837 36004911 -67490063 + (TCCCC)n Simple_repeat Simple_repeat 4 77 0 8 859 745 199 14 7 chr15 36004956 36005098 -67489876 - B1_Mur2 SINE Alu -6 143 1 9 859 405 320 105 48 chr15 36005237 36005569 -67489405 + MLT1E1A LTR MaLR 210 680 0 1 859 616 224 74 7 chr15 36005695 36005822 -67489152 + B1_Mur1 SINE Alu 1 137 -12 1 859 257 0 30 0 chr15 36005822 36005855 -67489119 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 1 859 3123 37 11 8 chr15 36006143 36006525 -67488449 + L1Md_F3 LINE L1 6202 6584 0 1 859 195 69 0 0 chr15 36009341 36009370 -67485604 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 859 1269 20 0 0 chr15 36011189 36011336 -67483638 + B1_Mus2 SINE Alu 1 147 0 1 859 222 118 0 0 chr15 36011336 36011370 -67483604 + (A)n Simple_repeat Simple_repeat 1 34 0 1 859 23 78 0 0 chr15 36011612 36011663 -67483311 + AT_rich Low_complexity Low_complexity 1 51 0 1 859 814 93 289 7 chr15 36011845 36011997 -67482977 - B2_Mm2 SINE B2 0 195 1 1 859 387 0 0 0 chr15 36012386 36012429 -67482545 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 859 241 179 0 51 chr15 36013738 36013797 -67481177 + L1MD LINE L1 4246 4301 -1845 2 859 797 156 0 23 chr15 36013974 36014145 -67480829 + CT-rich Low_complexity Low_complexity 3 169 0 2 859 474 18 0 0 chr15 36014136 36014191 -67480783 + (TC)n Simple_repeat Simple_repeat 2 56 0 2 859 314 224 0 0 chr15 36014191 36014258 -67480716 - B1_Mur4 SINE Alu -80 70 4 2 859 186 43 0 0 chr15 36014273 36014296 -67480678 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2 859 639 215 14 22 chr15 36014488 36014626 -67480348 - B3 SINE B2 -78 138 2 2 859 311 305 56 19 chr15 36014638 36014745 -67480229 - B1F SINE Alu -16 133 23 2 859 299 318 23 31 chr15 36014745 36014768 -67480206 - ID_B1 SINE B4 -16 208 80 2 859 210 37 0 0 chr15 36015256 36015283 -67479691 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2 859 1201 62 0 0 chr15 36015293 36015439 -67479535 - B1_Mus2 SINE Alu 0 147 2 2 859 346 240 40 32 chr15 36016202 36016327 -67478647 + L1MB7 LINE L1 5940 6065 -119 3 859 691 283 6 0 chr15 36016327 36016486 -67478488 + RSINE1 SINE B4 4 163 -2 3 859 222 62 0 0 chr15 36016504 36016536 -67478438 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 3 859 245 274 56 71 chr15 36016543 36016669 -67478305 + L1MB5 LINE L1 6051 6174 0 3 859 207 88 0 0 chr15 36017013 36017047 -67477927 + (A)n Simple_repeat Simple_repeat 1 34 0 3 859 880 254 10 15 chr15 36017701 36017905 -67477069 + B3 SINE B2 4 206 -10 3 859 636 191 9 0 chr15 36018131 36018241 -67476733 + PB1D10 SINE Alu 2 112 -5 3 859 250 335 91 23 chr15 36018301 36018521 -67476453 + L1MB2 LINE L1 5910 6144 -27 3 859 706 219 15 0 chr15 36018682 36018819 -67476155 - B1_Mur2 SINE Alu -9 140 2 3 859 718 228 77 17 chr15 36018858 36019061 -67475913 - B3A SINE B2 -6 210 1 3 859 670 256 46 6 chr15 36019205 36019378 -67475596 - B3A SINE B2 -16 182 3 4 859 642 255 0 30 chr15 36019427 36019593 -67475381 + RSINE1 SINE B4 5 165 0 4 859 368 316 123 21 chr15 36021123 36021428 -67473546 - L2a LINE L2 -306 3120 2785 4 859 231 299 30 30 chr15 36021577 36021677 -67473297 - ORR1E LTR MaLR -99 260 161 4 859 6207 13 0 0 chr15 36021677 36022381 -67472593 - L1_Mm LINE L1 -1376 4507 3804 4 859 449 207 18 9 chr15 36022394 36022506 -67472468 - ORR1E LTR MaLR -246 113 1 4 859 249 33 0 0 chr15 36022766 36022796 -67472178 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 859 24 53 0 0 chr15 36022974 36023012 -67471962 + AT_rich Low_complexity Low_complexity 1 38 0 4 859 233 250 0 14 chr15 36023130 36023199 -67471775 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 859 551 196 10 0 chr15 36023679 36023781 -67471193 + B1_Mur2 SINE Alu 47 149 0 4 859 201 74 0 0 chr15 36023848 36023875 -67471099 + (TA)n Simple_repeat Simple_repeat 2 28 0 4 859 211 188 124 146 chr15 36024015 36024152 -67470822 - B2_Mm2 SINE B2 -15 180 47 5 859 1765 197 42 34 chr15 36024684 36024887 -67470087 - ORR1C2 LTR MaLR -1 383 173 5 859 345 117 0 0 chr15 36024887 36024947 -67470027 + (CAGA)n Simple_repeat Simple_repeat 3 62 0 5 859 1765 197 42 34 chr15 36024947 36025121 -67469853 - ORR1C2 LTR MaLR -212 172 3 5 859 5400 202 48 45 chr15 36025123 36025740 -67469234 - ORR1C2-int LTR MaLR 0 1370 737 5 859 7857 70 18 9 chr15 36025740 36026754 -67468220 + RLTR13D5 LTR ERVK 1 1023 0 5 859 5400 202 48 45 chr15 36026754 36027500 -67467474 - ORR1C2-int LTR MaLR -634 736 4 5 859 2074 135 98 0 chr15 36027500 36027847 -67467127 - ORR1C2 LTR MaLR -3 381 1 5 859 517 336 76 33 chr15 36028290 36028619 -67466355 + MLT1D LTR MaLR 6 348 -157 5 859 465 76 0 0 chr15 36030815 36030881 -67464093 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 5 859 1105 65 0 14 chr15 36031113 36031254 -67463720 - B1_Mus1 SINE Alu -9 139 1 5 859 316 257 101 37 chr15 36031308 36031417 -67463557 + PB1 SINE Alu 12 127 0 5 859 490 224 184 0 chr15 36031774 36031899 -67463075 + B3 SINE B2 1 148 -68 5 859 274 272 0 37 chr15 36032174 36032281 -67462693 - B1F1 SINE Alu -1 148 46 5 859 829 113 30 0 chr15 36032711 36032844 -67462130 + B2_Mm1t SINE B2 52 188 -5 6 859 327 112 0 36 chr15 36032924 36033007 -67461967 + (CA)n Simple_repeat Simple_repeat 1 80 0 6 859 396 0 0 0 chr15 36033245 36033289 -67461685 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 859 417 224 12 0 chr15 36034384 36034469 -67460505 + PB1D7 SINE Alu 19 104 -16 6 859 533 329 86 62 chr15 36034534 36035208 -67459766 - L1MCa LINE L1 -3353 2968 2280 6 859 213 39 0 0 chr15 36035698 36035724 -67459250 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 6 859 749 52 165 0 chr15 36035873 36035988 -67458986 + B1_Mus1 SINE Alu 15 148 0 6 859 659 110 0 0 chr15 36035988 36036079 -67458895 + (GAAA)n Simple_repeat Simple_repeat 3 93 0 6 859 861 174 0 0 chr15 36036079 36036240 -67458734 + GA-rich Low_complexity Low_complexity 3 163 0 6 859 777 221 78 5 chr15 36036411 36036602 -67458372 - B3 SINE B2 0 216 12 6 859 36 40 0 0 chr15 36036895 36036945 -67458029 + AT_rich Low_complexity Low_complexity 1 50 0 7 859 456 195 0 0 chr15 36038257 36038339 -67456635 + B1_Mur1 SINE Alu 67 148 -1 7 859 341 292 28 29 chr15 36038372 36038492 -67456482 + AluG_3 SINE Alu 1 217 -94 7 859 494 259 50 7 chr15 36038616 36038756 -67456218 + ID_B1 SINE B4 79 224 0 7 859 206 267 0 0 chr15 36038978 36039023 -67455951 - L2c LINE L2 -50 3337 3293 7 859 2359 139 74 13 chr15 36039341 36039735 -67455239 - MTC LTR MaLR 0 421 4 7 859 279 386 66 29 chr15 36039998 36040241 -67454733 + MamRep137 DNA TcMar? 58 309 -135 7 859 1044 127 193 0 chr15 36040247 36040428 -67454546 + B3 SINE B2 1 216 0 7 859 281 293 121 52 chr15 36040988 36041161 -67453813 + MER5A DNA MER1_type 1 185 -4 7 859 733 66 57 0 chr15 36043257 36043363 -67451611 + B1_Mm SINE Alu 30 141 -6 7 859 500 0 17 0 chr15 36043365 36043425 -67451549 + (GA)n Simple_repeat Simple_repeat 2 62 0 8 859 556 197 50 33 chr15 36043429 36043550 -67451424 - B1_Mur4 SINE Alu -22 128 6 8 859 216 222 0 73 chr15 36043710 36043778 -67451196 - L3 LINE CR1 -92 4397 4335 8 859 487 274 49 102 chr15 36043918 36044182 -67450792 - L3 LINE CR1 -362 4127 3878 8 859 1345 50 0 6 chr15 36044349 36044530 -67450444 + B2_Mm2 SINE B2 15 194 -1 8 860 1706 65 0 0 chr15 36045048 36045277 -67449697 + MusHAL1 LINE L1 742 970 -1742 8 860 7249 103 33 8 chr15 36045274 36046636 -67448338 + Lx2 LINE L1 5261 6648 -349 8 860 1165 117 88 0 chr15 36046631 36046836 -67448138 + Lx2 LINE L1 6775 6997 0 8 860 475 155 16 16 chr15 36047692 36047798 -67447176 - B1F SINE Alu 0 120 15 8 860 353 236 0 0 chr15 36047975 36048047 -67446927 - ID4_ SINE ID -6 77 6 8 860 577 206 168 94 chr15 36048682 36048885 -67446089 - ID_B1 SINE B4 -5 219 2 8 860 1144 76 0 0 chr15 36049049 36049193 -67445781 + B1_Mus1 SINE Alu 2 145 -3 8 860 243 0 0 0 chr15 36049193 36049220 -67445754 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 9 860 285 29 0 0 chr15 36050259 36050293 -67444681 + (GGA)n Simple_repeat Simple_repeat 3 36 0 9 860 417 200 19 39 chr15 36051382 36051486 -67443488 - PB1D7 SINE Alu 0 120 19 9 860 665 206 61 0 chr15 36051551 36051682 -67443292 - B1_Mur1 SINE Alu -9 140 2 9 860 23 0 0 0 chr15 36051699 36051722 -67443252 + AT_rich Low_complexity Low_complexity 1 23 0 9 860 446 241 74 27 chr15 36051759 36051908 -67443066 + RSINE1 SINE B4 1 156 -9 9 860 297 269 86 0 chr15 36052249 36052342 -67442632 + ID_B1 SINE B4 114 214 -10 9 860 1407 84 10 5 chr15 36052767 36052959 -67442015 - B2_Mm2 SINE B2 -1 194 2 9 860 565 267 95 18 chr15 36053383 36053551 -67441423 + B4A SINE B4 3 183 -109 9 860 865 70 16 0 chr15 36053567 36053605 -67441369 + (GGA)n Simple_repeat Simple_repeat 3 42 0 9 860 1374 33 0 16 chr15 36053605 36053788 -67441186 + (GAA)n Simple_repeat Simple_repeat 1 180 0 1 860 865 70 16 0 chr15 36053788 36053877 -67441097 + (GGA)n Simple_repeat Simple_repeat 1 89 0 1 860 3149 44 33 13 chr15 36054014 36054406 -67440568 + MTB LTR MaLR 1 400 0 1 860 1070 187 12 49 chr15 36054466 36054713 -67440261 - MTC LTR MaLR -179 242 5 1 860 45 34 0 0 chr15 36055014 36055073 -67439901 + AT_rich Low_complexity Low_complexity 1 59 0 1 860 374 154 0 0 chr15 36055223 36055288 -67439686 - URR1B DNA MER1_type 0 225 161 1 860 465 169 11 0 chr15 36055283 36055372 -67439602 - URR1B DNA MER1_type -12 213 124 1 860 757 193 68 6 chr15 36055370 36055532 -67439442 - URR1B DNA MER1_type -53 172 1 1 860 231 36 0 0 chr15 36056239 36056267 -67438707 + (A)n Simple_repeat Simple_repeat 1 28 0 1 860 235 297 182 48 chr15 36056270 36056648 -67438326 - Charlie13a DNA Charlie -985 529 101 1 860 192 40 0 0 chr15 36056670 36056695 -67438279 + (CTG)n Simple_repeat Simple_repeat 1 25 0 1 860 298 216 138 98 chr15 36056763 36056818 -67438156 - RSINE1 SINE B4 -35 130 76 1 860 1916 155 123 86 chr15 36056818 36057248 -67437726 + RLTR41 LTR ERV1 1 446 0 1 860 298 216 138 98 chr15 36057248 36057315 -67437659 - RSINE1 SINE B4 -90 75 3 1 860 1277 142 31 79 chr15 36057517 36057808 -67437166 - ORR1A4 LTR MaLR -52 277 1 1 860 498 123 0 0 chr15 36057808 36057889 -67437085 - ORR1A4-int LTR MaLR 0 1963 1883 1 860 1834 191 30 32 chr15 36057970 36058376 -67436598 - MTD LTR MaLR -14 405 1 1 860 307 0 0 44 chr15 36058670 36058715 -67436259 + (CCCCCA)n Simple_repeat Simple_repeat 1 43 0 1 860 547 275 47 93 chr15 36059102 36059359 -67435615 - Lx9 LINE L1 -187 7457 7213 1 860 260 296 65 43 chr15 36059697 36059835 -67435139 + ID_B1 SINE B4 82 222 -2 1 860 36497 63 2 3 chr15 36059983 36066197 -67428777 - L1Md_F2 LINE L1 -1 6584 279 1 860 479 237 20 80 chr15 36066228 36066379 -67428595 + B1F2 SINE Alu 1 142 -7 1 860 238 238 136 24 chr15 36066639 36066764 -67428210 - MLT1J LTR MaLR -130 382 244 1 860 259 303 22 0 chr15 36067476 36067565 -67427409 + MIRb SINE MIR 102 192 -76 1 860 201 74 0 0 chr15 36067851 36067878 -67427096 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 1 860 204 177 35 71 chr15 36069079 36069164 -67425810 + T-rich Low_complexity Low_complexity 4 85 0 1 860 698 123 75 23 chr15 36069183 36069316 -67425658 - B1_Mur3 SINE Alu -2 147 8 1 860 316 260 146 0 chr15 36069342 36069438 -67425536 - ID_B1 SINE B4 -6 218 109 1 860 186 87 0 61 chr15 36069979 36070028 -67424946 + (CTGGGG)n Simple_repeat Simple_repeat 1 46 0 1 860 378 274 39 0 chr15 36070494 36070596 -67424378 + ID_B1 SINE B4 93 198 -26 1 860 245 336 70 0 chr15 36070596 36070622 -67424352 + B1F1 SINE Alu 12 148 -1 1 860 22 94 0 0 chr15 36070630 36070694 -67424280 + AT_rich Low_complexity Low_complexity 1 64 0 1 860 326 243 35 26 chr15 36070727 36070841 -67424133 - PB1D10 SINE Alu -1 116 2 1 860 363 241 37 9 chr15 36071148 36071257 -67423717 + PB1D10 SINE Alu 3 114 -3 1 860 206 348 62 52 chr15 36071353 36071641 -67423333 + L2 LINE L2 2580 2870 -549 1 860 236 252 239 25 chr15 36072006 36072169 -67422805 + B3A SINE B2 1 198 0 1 860 224 289 50 30 chr15 36072187 36072287 -67422687 - L2 LINE L2 -822 2597 2496 1 860 2482 145 36 15 chr15 36072941 36073353 -67421621 + MTC LTR MaLR 1 421 0 1 860 472 286 159 14 chr15 36073633 36073999 -67420975 - L1ME1 LINE L1 -211 5967 5551 1 860 285 292 88 46 chr15 36074168 36074362 -67420612 + MER89 LTR ERV1 268 469 -90 1 860 1084 182 35 0 chr15 36074973 36075171 -67419803 + B3 SINE B2 1 205 -11 1 860 1060 204 10 5 chr15 36075287 36075489 -67419485 - B3 SINE B2 -12 204 2 1 860 754 236 81 30 chr15 36075587 36075784 -67419190 - B3 SINE B2 -9 207 1 1 860 428 221 23 0 chr15 36076016 36076102 -67418872 + B3 SINE B2 96 183 -33 1 860 593 208 114 8 chr15 36076333 36076464 -67418510 + B1_Mur1 SINE Alu 5 149 0 1 860 559 86 43 0 chr15 36076495 36076588 -67418386 + L1_Mus4 LINE L1 6538 6634 -2 1 860 374 118 17 8 chr15 36078282 36078359 -67416615 - RMER1B Other Other -23 1043 989 1 860 1247 225 87 38 chr15 36078387 36078852 -67416122 - RMER1B Other Other -248 782 272 1 860 213 39 0 0 chr15 36078865 36078891 -67416083 + (G)n Simple_repeat Simple_repeat 1 26 0 1 860 330 87 0 0 chr15 36078933 36078979 -67415995 + (TTA)n Simple_repeat Simple_repeat 2 47 0 1 860 766 168 228 6 chr15 36078979 36079141 -67415833 - B3 SINE B2 -17 199 2 1 860 383 282 173 0 chr15 36079306 36079462 -67415512 + B3A SINE B2 1 183 -15 1 860 587 228 66 0 chr15 36079642 36079778 -67415196 + B1F SINE Alu 5 149 0 1 860 29 47 0 0 chr15 36079815 36079858 -67415116 + AT_rich Low_complexity Low_complexity 1 43 0 1 860 801 194 234 0 chr15 36079981 36080156 -67414818 + B3 SINE B2 1 216 0 1 860 666 168 64 21 chr15 36080187 36080327 -67414647 + B1_Mur2 SINE Alu 2 147 -2 1 860 1223 48 0 0 chr15 36080651 36080797 -67414177 + B1_Mm SINE Alu 2 147 0 1 860 23 33 0 0 chr15 36080961 36080991 -67413983 + AT_rich Low_complexity Low_complexity 1 30 0 1 860 311 0 26 0 chr15 36082353 36082392 -67412582 + (TC)n Simple_repeat Simple_repeat 2 41 0 1 860 275 337 93 39 chr15 36082454 36082658 -67412316 - MER58A DNA MER1_type -6 218 4 1 860 275 158 70 0 chr15 36082959 36083016 -67411958 + L1MA9 LINE L1 6252 6312 0 1 860 373 202 18 55 chr15 36083665 36083775 -67411199 - B1_Mur1 SINE Alu -18 131 26 1 860 368 245 50 10 chr15 36084077 36084176 -67410798 + PB1D10 SINE Alu 2 104 -13 1 860 793 262 48 36 chr15 36084176 36084480 -67410494 + B4A SINE B4 8 292 0 1 860 372 284 70 56 chr15 36084492 36084634 -67410340 + B1F2 SINE Alu 6 149 0 1 860 4128 80 5 5 chr15 36084746 36085299 -67409675 + L1_Mus4 LINE L1 6002 6554 -82 1 860 663 174 121 0 chr15 36085385 36085517 -67409457 + B1_Mur3 SINE Alu 2 149 0 1 860 651 224 7 7 chr15 36085576 36085724 -67409250 + B1F SINE Alu 1 148 -1 1 860 269 192 40 14 chr15 36086133 36086207 -67408767 + CT-rich Low_complexity Low_complexity 3 78 0 1 860 874 153 0 39 chr15 36086236 36086392 -67408582 - B1_Mur4 SINE Alu 0 150 1 1 860 22 35 0 0 chr15 36086519 36086548 -67408426 + AT_rich Low_complexity Low_complexity 1 29 0 1 860 570 164 54 9 chr15 36086569 36086680 -67408294 - B1F2 SINE Alu 0 149 34 1 860 214 241 194 101 chr15 36086576 36086705 -67408269 - B4 SINE B4 -72 220 80 1 860 281 267 51 148 chr15 36086764 36086940 -67408034 + RSINE1 SINE B4 2 160 -5 1 860 258 105 0 0 chr15 36086953 36086991 -67407983 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 860 318 279 23 11 chr15 36088077 36088164 -67406810 - RSINE1 SINE B4 -13 152 65 1 860 274 283 70 10 chr15 36088211 36088311 -67406663 + PB1D7 SINE Alu 8 113 -7 1 860 427 254 41 8 chr15 36088826 36088949 -67406025 + RSINE1 SINE B4 5 131 -34 1 860 585 40 0 0 chr15 36088952 36089028 -67405946 + (TC)n Simple_repeat Simple_repeat 1 76 0 1 860 297 0 0 0 chr15 36089028 36089060 -67405914 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 860 2066 147 97 72 chr15 36089163 36089618 -67405356 + RMER4A LTR ERVK 1 466 0 1 860 252 281 12 24 chr15 36090089 36090173 -67404801 + RSINE1 SINE B4 73 155 -10 1 860 230 167 95 0 chr15 36090183 36090225 -67404749 + RSINE1 SINE B4 104 149 -16 1 860 411 279 81 8 chr15 36090780 36090903 -67404071 + ID_B1 SINE B4 81 212 -12 1 860 325 295 143 0 chr15 36090962 36091074 -67403900 + B4A SINE B4 24 151 -141 1 860 232 261 29 14 chr15 36091207 36091277 -67403697 - B1F SINE Alu -69 80 10 1 860 255 266 25 25 chr15 36093258 36093339 -67401635 + B3A SINE B2 1 81 -117 1 860 191 32 65 0 chr15 36094186 36094217 -67400757 + (TAAAAA)n Simple_repeat Simple_repeat 3 35 0 1 860 449 263 0 0 chr15 36095089 36095188 -67399786 - ID_B1 SINE B4 -42 182 84 1 860 495 0 0 0 chr15 36095216 36095271 -67399703 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 860 384 209 114 0 chr15 36095271 36095366 -67399608 - PB1D10 SINE Alu -9 108 2 1 860 413 229 136 0 chr15 36095466 36095584 -67399390 + B1F2 SINE Alu 16 149 0 1 860 713 250 18 0 chr15 36096111 36096275 -67398699 + B3A SINE B2 12 178 -20 1 860 321 26 0 0 chr15 36096818 36096856 -67398118 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 860 359 326 20 0 chr15 36096898 36096996 -67397978 - RSINE1 SINE B4 -64 101 2 1 860 664 206 0 23 chr15 36097307 36097436 -67397538 + B1_Mur1 SINE Alu 3 128 -21 1 860 664 206 0 23 chr15 36098457 36098586 -67396388 + B1_Mur1 SINE Alu 3 128 -21 1 860 547 255 137 11 chr15 36099336 36099526 -67395448 + ID_B1 SINE B4 6 219 -5 1 860 839 215 19 0 chr15 36099553 36099711 -67395263 + U1 snRNA snRNA 4 164 -1 1 860 360 262 48 19 chr15 36099885 36099990 -67394984 + ID_B1 SINE B4 80 187 -37 1 860 226 224 20 0 chr15 36099975 36100024 -67394950 - RSINE1 SINE B4 -115 50 1 1 860 1486 38 15 65 chr15 36100572 36100771 -67394203 - B2_Mm1a SINE B2 -4 189 1 1 860 241 303 133 11 chr15 36100821 36100911 -67394063 + ID_B1 SINE B4 76 176 -48 1 860 338 215 150 12 chr15 36100833 36100913 -67394061 + PB1D10 SINE Alu 7 97 -20 1 860 3104 12 0 0 chr15 36100914 36101259 -67393715 + L1Md_T LINE L1 5242 5586 -297 1 860 9152 6 0 0 chr15 36101259 36102255 -67392719 + L1Md_T LINE L1 5587 6582 0 1 860 614 299 12 25 chr15 36102284 36102445 -67392529 + B3A SINE B2 2 160 -38 2 860 211 259 11 90 chr15 36103223 36103312 -67391662 + PB1D10 SINE Alu 4 85 -32 2 860 186 43 0 0 chr15 36103388 36103411 -67391563 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 860 286 261 9 141 chr15 36103919 36104059 -67390915 + B1F1 SINE Alu 1 118 -2 2 860 351 0 0 0 chr15 36104280 36104319 -67390655 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 2 860 1102 59 0 0 chr15 36104319 36104455 -67390519 - B1_Mus1 SINE Alu -11 137 2 2 860 240 86 0 0 chr15 36104532 36104567 -67390407 + (T)n Simple_repeat Simple_repeat 1 35 0 2 860 230 259 19 0 chr15 36104572 36104626 -67390348 - ID4_ SINE ID -4 79 25 2 860 455 227 91 0 chr15 36105440 36105550 -67389424 + B1_Mur1 SINE Alu 29 148 -1 2 860 334 218 230 23 chr15 36105552 36105726 -67389248 + B3 SINE B2 1 210 -6 2 860 328 222 0 122 chr15 36105808 36105890 -67389084 - B1_Mus1 SINE Alu -69 79 8 2 860 252 0 0 0 chr15 36105901 36105929 -67389045 + (T)n Simple_repeat Simple_repeat 1 28 0 2 860 550 88 0 0 chr15 36106127 36106207 -67388767 + B1_Mm SINE Alu 68 147 0 2 860 24 67 0 0 chr15 36106239 36106284 -67388690 + AT_rich Low_complexity Low_complexity 1 45 0 2 860 318 202 34 45 chr15 36106793 36106881 -67388093 + RSINE1 SINE B4 38 124 -41 2 860 1225 54 0 0 chr15 36107041 36107188 -67387786 + B1_Mus1 SINE Alu 2 148 0 2 860 197 77 0 49 chr15 36107188 36107229 -67387745 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 2 860 452 311 7 0 chr15 36107289 36107424 -67387550 + B3A SINE B2 3 138 -60 2 860 377 279 0 37 chr15 36107514 36107622 -67387352 + ID_B1 SINE B4 83 186 -38 2 860 217 280 0 164 chr15 36107521 36107649 -67387325 + B1_Mus1 SINE Alu 10 116 -32 2 860 180 0 0 0 chr15 36107849 36107869 -67387105 + (T)n Simple_repeat Simple_repeat 1 20 0 2 860 988 52 0 0 chr15 36107869 36108003 -67386971 - B1_Mus2 SINE Alu 0 147 14 2 860 534 153 202 8 chr15 36108789 36108908 -67386066 + B1_Mus2 SINE Alu 6 147 0 2 860 1501 190 123 6 chr15 36109852 36110211 -67384763 + MTD LTR MaLR 13 404 -15 2 860 252 0 0 0 chr15 36110309 36110337 -67384637 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2 860 425 222 63 119 chr15 36110338 36110403 -67384571 - B1_Mur1 SINE Alu -6 143 89 2 860 1585 62 0 0 chr15 36110403 36110596 -67384378 + B2_Mm1t SINE B2 1 193 0 2 860 425 222 63 119 chr15 36110596 36110673 -67384301 - B1_Mur1 SINE Alu -61 88 9 2 860 388 233 209 0 chr15 36110745 36110917 -67384057 - B3 SINE B2 -8 208 1 2 860 252 128 50 25 chr15 36111314 36111394 -67383580 + (TA)n Simple_repeat Simple_repeat 1 82 0 2 860 390 21 0 0 chr15 36112260 36112307 -67382667 + (TATG)n Simple_repeat Simple_repeat 2 48 0 2 860 1428 55 22 6 chr15 36112472 36112654 -67382320 + B2_Mm2 SINE B2 5 189 -6 2 860 484 259 135 21 chr15 36112667 36112860 -67382114 + ID_B1 SINE B4 2 216 -8 2 860 570 212 112 77 chr15 36113026 36113195 -67381779 - B3 SINE B2 -7 209 35 2 860 542 268 36 0 chr15 36113805 36113943 -67381031 + ID_B1 SINE B4 82 224 0 2 860 2159 151 53 13 chr15 36114125 36114522 -67380452 - MTC LTR MaLR -8 413 1 2 860 221 315 95 14 chr15 36114652 36114726 -67380248 - B1F1 SINE Alu -58 91 12 2 860 425 247 82 0 chr15 36114782 36114879 -67380095 + PB1D10 SINE Alu 3 107 -10 2 860 1421 198 203 99 chr15 36114934 36115024 -67379950 - RLTR20A2 LTR ERVK 0 551 410 2 860 189 121 0 0 chr15 36115024 36115057 -67379917 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 860 1740 121 196 117 chr15 36115057 36115356 -67379618 - RLTR20A2 LTR ERVK -137 441 123 2 860 1224 54 0 0 chr15 36115356 36115503 -67379471 - B1_Mus1 SINE Alu 0 148 2 2 860 1740 121 196 117 chr15 36115503 36115605 -67379369 - RLTR20A2 LTR ERVK -456 122 8 2 860 200 34 0 33 chr15 36115703 36115733 -67379241 + (TCTG)n Simple_repeat Simple_repeat 3 31 0 2 860 525 32 0 0 chr15 36115745 36115808 -67379166 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 860 555 276 39 8 chr15 36115811 36115939 -67379035 - RSINE1 SINE B4 -30 135 4 2 860 324 245 240 19 chr15 36116032 36116136 -67378838 - RSINE1 SINE B4 -37 128 2 2 860 259 212 35 0 chr15 36116138 36116223 -67378751 + L1MB3 LINE L1 6096 6183 0 2 860 248 351 52 0 chr15 36116645 36116722 -67378252 - ID4 SINE ID -1 82 2 2 860 451 230 17 26 chr15 36116730 36116846 -67378128 - PB1D10 SINE Alu -2 115 1 2 860 593 196 0 67 chr15 36117354 36117474 -67377500 - PB1D9 SINE Alu -8 112 1 2 860 208 123 29 71 chr15 36117485 36117555 -67377419 + (TATAA)n Simple_repeat Simple_repeat 3 69 0 2 860 204 125 0 0 chr15 36117566 36117598 -67377376 + (TA)n Simple_repeat Simple_repeat 1 32 0 2 860 503 283 46 0 chr15 36117602 36117754 -67377220 - RSINE1 SINE B4 -4 161 3 2 860 684 208 46 0 chr15 36117975 36118146 -67376828 - B3 SINE B2 -2 193 1 2 860 480 276 24 8 chr15 36118246 36118370 -67376604 - PB1 SINE Alu 0 127 2 2 860 402 21 0 0 chr15 36118494 36118541 -67376433 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 860 907 214 75 0 chr15 36118664 36118865 -67376109 - B3 SINE B2 0 216 1 2 860 402 279 160 21 chr15 36118928 36119115 -67375859 - MLT1C LTR MaLR -36 431 219 2 860 215 152 0 61 chr15 36119822 36119871 -67375103 + T-rich Low_complexity Low_complexity 2 47 0 2 860 323 272 115 10 chr15 36120444 36120548 -67374426 - PB1D10 SINE Alu 0 117 3 2 860 520 58 0 14 chr15 36120637 36120707 -67374267 - B1_Mur3 SINE Alu -1 148 80 2 860 367 200 25 0 chr15 36120679 36120759 -67374215 + B1_Mur3 SINE Alu 28 109 -40 2 860 616 254 60 0 chr15 36121136 36121270 -67373704 - ID_B1 SINE B4 -4 220 79 2 860 263 321 0 12 chr15 36121604 36121686 -67373288 + ID4 SINE ID 1 81 -2 2 860 738 219 121 16 chr15 36121907 36122097 -67372877 + B3 SINE B2 1 210 -6 2 860 524 297 28 68 chr15 36122468 36122717 -67372257 - RMER2 LTR ERV1 0 567 329 2 860 698 204 66 0 chr15 36123030 36123167 -67371807 + B1_Mus2 SINE Alu 1 146 -1 2 860 385 263 128 56 chr15 36123256 36123381 -67371593 - ID_B1 SINE B4 0 224 91 2 860 249 180 20 0 chr15 36123518 36123568 -67371406 - PB1D10 SINE Alu -27 90 40 2 860 700 255 153 12 chr15 36123617 36123871 -67371103 - MLT1B LTR MaLR -8 382 93 2 860 1081 240 125 29 chr15 36123891 36124235 -67370739 + MTE2b LTR MaLR 3 379 0 2 860 288 253 62 52 chr15 36124279 36124375 -67370599 - MLT1B LTR MaLR -290 100 4 2 860 325 241 36 12 chr15 36124404 36124488 -67370486 - MTEb LTR MaLR 0 379 294 2 860 654 238 0 54 chr15 36124629 36124798 -67370176 - RLTR20A1 LTR ERVK 0 551 377 2 860 824 124 101 23 chr15 36124795 36124953 -67370021 - RLTR20A1 LTR ERVK -313 215 1 2 860 1393 143 201 37 chr15 36125359 36125657 -67369317 + ORR1B1 LTR MaLR 45 391 -3 2 860 24 67 0 0 chr15 36126004 36126049 -67368925 + AT_rich Low_complexity Low_complexity 1 45 0 2 860 235 80 60 0 chr15 36126123 36126173 -67368801 + (TTTTG)n Simple_repeat Simple_repeat 1 53 0 2 860 463 268 16 39 chr15 36126278 36126406 -67368568 + ID_B1 SINE B4 92 216 -8 2 860 454 284 87 83 chr15 36126716 36126767 -67368207 + Lx8 LINE L1 7208 7259 -214 2 860 853 191 240 45 chr15 36126767 36127075 -67367899 - ORR1D2 LTR MaLR 0 370 3 2 860 454 284 87 83 chr15 36127075 36127288 -67367686 + Lx8 LINE L1 7260 7473 0 2 860 758 192 20 14 chr15 36127663 36127811 -67367163 - B1_Mur1 SINE Alu 0 149 1 2 860 1498 62 5 5 chr15 36127856 36128049 -67366925 + B2_Mm2 SINE B2 3 195 0 2 860 225 286 18 0 chr15 36128195 36128251 -67366723 - LTR40a LTR ERVL 0 462 406 2 860 675 194 54 27 chr15 36128273 36128421 -67366553 - ORR1D1 LTR MaLR 0 384 233 2 860 805 174 8 0 chr15 36128436 36128568 -67366406 - B1_Mus1 SINE Alu 0 148 16 2 860 869 160 159 6 chr15 36128574 36128756 -67366218 - ORR1D1 LTR MaLR -164 210 1 2 860 227 376 89 0 chr15 36128800 36128901 -67366073 - LTR40a LTR ERVL -165 354 245 2 860 537 92 0 0 chr15 36128909 36128985 -67365989 + (CA)n Simple_repeat Simple_repeat 2 77 0 2 860 661 201 158 41 chr15 36129016 36129187 -67365787 + B3A SINE B2 1 191 -7 2 860 1138 78 0 0 chr15 36129412 36129554 -67365420 - B1_Mus1 SINE Alu -6 142 1 2 860 624 216 158 6 chr15 36129574 36129751 -67365223 - B3 SINE B2 -8 208 5 2 860 563 245 69 14 chr15 36130324 36130469 -67364505 - RSINE1 SINE B4 -2 163 11 2 860 465 19 0 0 chr15 36130499 36130553 -67364421 + (TTG)n Simple_repeat Simple_repeat 2 55 0 2 860 532 179 0 40 chr15 36130553 36130652 -67364322 - PB1D9 SINE Alu -16 104 10 2 860 990 236 260 43 chr15 36130676 36131114 -67363860 - MT2A LTR ERVL 0 533 1 2 860 370 273 22 34 chr15 36131410 36131588 -67363386 - L1MD LINE L1 -927 5219 5044 2 860 431 254 103 15 chr15 36131596 36131732 -67363242 - B1F1 SINE Alu 0 149 2 2 860 279 183 42 14 chr15 36131746 36131818 -67363156 - L1MC LINE L1 -1225 4921 4848 2 860 220 301 0 44 chr15 36132056 36132237 -67362737 + (CTGTG)n Simple_repeat Simple_repeat 3 175 0 2 860 515 254 9 0 chr15 36133177 36133291 -67361683 - PB1D7 SINE Alu -3 117 3 2 860 214 125 12 48 chr15 36133570 36133654 -67361320 + GA-rich Low_complexity Low_complexity 1 81 0 2 860 489 244 0 42 chr15 36133744 36133864 -67361110 - PB1D10 SINE Alu -2 115 1 2 860 313 156 0 0 chr15 36134078 36134123 -67360851 - HAL1-3A_ME LINE L1 -838 2020 1976 2 860 227 255 54 18 chr15 36134123 36134179 -67360795 - ID4 SINE ID -18 65 8 2 860 1976 292 101 75 chr15 36134796 36135016 -67359958 - Lx8 LINE L1 -6 7467 7229 2 860 410 98 16 0 chr15 36135016 36135077 -67359897 + U6 snRNA snRNA 12 73 -34 3 860 1976 292 101 75 chr15 36135077 36135790 -67359184 - Lx8 LINE L1 -6 7228 6449 2 860 371 215 54 45 chr15 36135808 36135920 -67359054 - RMER15-int LTR ERVL -680 4319 4207 3 860 569 268 14 0 chr15 36136233 36136371 -67358603 + ID_B1 SINE B4 82 221 -3 3 860 250 87 43 0 chr15 36136942 36136988 -67357986 + (TC)n Simple_repeat Simple_repeat 1 48 0 3 860 245 176 75 38 chr15 36137174 36137227 -67357747 + ID4 SINE ID 10 64 -19 3 860 482 201 24 0 chr15 36137237 36137492 -67357482 + (CA)n Simple_repeat Simple_repeat 1 261 0 3 860 504 184 19 37 chr15 36137796 36137903 -67357071 - PB1D10 SINE Alu -1 116 12 3 860 632 245 74 7 chr15 36137941 36138089 -67356885 - B3 SINE B2 -36 180 23 3 860 1140 65 0 0 chr15 36138581 36138719 -67356255 + B1_Mus1 SINE Alu 2 139 -9 3 860 497 239 18 9 chr15 36139039 36139149 -67355825 + PB1D7 SINE Alu 5 115 -5 3 860 236 250 111 0 chr15 36139363 36139435 -67355539 - PB1D9 SINE Alu 0 120 41 3 860 576 51 114 0 chr15 36139469 36139548 -67355426 + B1_Mus2 SINE Alu 60 147 0 3 860 233 254 28 69 chr15 36139694 36139766 -67355208 - B1F1 SINE Alu 0 149 81 3 860 243 0 0 0 chr15 36141105 36141132 -67353842 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 860 292 260 112 20 chr15 36141708 36141806 -67353168 + MER94 DNA AcHobo 13 119 -15 3 860 1996 218 23 34 chr15 36142546 36142988 -67351986 - Lx5 LINE L1 0 7050 6614 3 860 638 243 29 0 chr15 36143231 36143371 -67351603 + ID_B1 SINE B4 81 224 0 3 860 324 264 289 14 chr15 36143489 36143631 -67351343 - B3A SINE B2 -16 182 2 3 860 765 207 40 11 chr15 36143651 36143827 -67351147 - B3A SINE B2 -15 183 3 3 860 1008 147 0 0 chr15 36144164 36144489 -67350485 + (CA)n Simple_repeat Simple_repeat 1 325 0 3 860 201 69 0 0 chr15 36145144 36145161 -67349813 + (TG)n Simple_repeat Simple_repeat 2 18 0 3 860 1441 84 11 0 chr15 36145161 36145351 -67349623 + B2_Mm1t SINE B2 2 193 0 3 860 201 69 0 0 chr15 36145351 36145362 -67349612 + (TG)n Simple_repeat Simple_repeat 1 11 0 3 860 306 80 39 20 chr15 36145368 36145419 -67349555 - HAL1-3A_ME LINE L1 -831 2027 1976 3 860 555 275 122 41 chr15 36145437 36145683 -67349291 - B4A SINE B4 0 292 27 3 860 728 176 0 12 chr15 36146482 36146643 -67348331 + GA-rich Low_complexity Low_complexity 3 161 0 3 860 853 166 25 31 chr15 36147402 36147564 -67347410 + B2_Mm2 SINE B2 17 177 -18 3 860 400 198 29 77 chr15 36147685 36147789 -67347185 + B1_Mur1 SINE Alu 43 141 -8 3 860 183 80 0 0 chr15 36147789 36147814 -67347160 + (TAA)n Simple_repeat Simple_repeat 2 26 0 3 860 722 160 30 3 chr15 36148524 36148672 -67346302 - B1_Mus2 SINE Alu -1 148 1 3 860 455 273 14 166 chr15 36148672 36148759 -67346215 - ID SINE ID -143 81 27 3 860 497 331 78 19 chr15 36148837 36149108 -67345866 + B4A SINE B4 2 288 -4 3 860 586 212 92 14 chr15 36149286 36149512 -67345462 - L1MB5 LINE L1 -57 6121 5880 3 860 383 297 51 15 chr15 36149573 36149768 -67345206 - L1MB5 LINE L1 -381 5793 5592 3 860 672 56 0 0 chr15 36149829 36149918 -67345056 + (TTTC)n Simple_repeat Simple_repeat 2 90 0 3 860 1116 72 0 0 chr15 36149929 36150067 -67344907 - B1_Mm SINE Alu -9 138 1 3 860 427 159 21 21 chr15 36150678 36150774 -67344200 + B1_Mus2 SINE Alu 51 146 -1 3 860 658 209 67 0 chr15 36150940 36151074 -67343900 - B1_Mur3 SINE Alu 0 149 7 3 860 418 205 0 26 chr15 36151510 36151625 -67343349 + GA-rich Low_complexity Low_complexity 3 114 0 3 860 454 268 71 32 chr15 36151704 36151858 -67343116 + RSINE1 SINE B4 6 165 0 3 860 929 159 190 17 chr15 36151988 36152167 -67342807 - B3 SINE B2 -6 210 1 3 860 297 253 27 0 chr15 36152241 36152316 -67342658 - B3A SINE B2 -121 77 1 3 860 364 295 61 15 chr15 36152328 36152459 -67342515 - B1F SINE Alu -8 141 5 3 860 776 171 0 30 chr15 36154073 36154206 -67340768 - B3 SINE B2 -86 130 2 3 860 432 259 247 0 chr15 36154831 36154989 -67339985 - B3 SINE B2 -19 197 1 3 860 1632 81 11 82 chr15 36156229 36156498 -67338476 - L1_Mus2 LINE L1 0 6566 6317 3 860 364 71 8 0 chr15 36156501 36156573 -67338401 + L1_Mus2 LINE L1 6241 6290 -346 3 860 663 240 62 39 chr15 36156653 36156831 -67338143 - B3A SINE B2 -16 182 1 3 860 432 245 17 68 chr15 36157607 36157725 -67337249 - ID_B1 SINE B4 0 224 113 3 860 1246 170 273 3 chr15 36157781 36158070 -67336904 + ORR1B2 LTR MaLR 1 367 0 3 860 479 199 73 0 chr15 36158189 36158306 -67336668 - B1F SINE Alu -5 144 20 3 860 340 111 32 0 chr15 36158321 36158384 -67336590 + (TTCTC)n Simple_repeat Simple_repeat 4 68 0 3 860 3795 154 122 67 chr15 36158395 36159248 -67335726 - RMER13B LTR ERVK -8 900 1 3 860 429 269 143 16 chr15 36159248 36159418 -67335556 - MLT1B LTR MaLR -192 198 5 3 860 889 163 0 7 chr15 36160023 36160165 -67334809 - B1_Mus1 SINE Alu -2 146 6 3 860 480 240 75 7 chr15 36160590 36160737 -67334237 - RSINE1 SINE B4 -6 159 3 3 860 318 289 10 10 chr15 36162213 36162311 -67332663 - PB1 SINE Alu -2 125 28 3 860 1010 196 188 22 chr15 36162371 36162695 -67332279 + MTE2b LTR MaLR 1 378 -1 3 860 492 203 50 0 chr15 36163409 36163517 -67331457 - B1_Mus1 SINE Alu -2 118 2 3 860 259 289 83 12 chr15 36165362 36165446 -67329528 - B3 SINE B2 -11 205 116 3 860 2172 132 121 3 chr15 36165770 36166157 -67328817 - RMER4A LTR ERVK -33 433 1 3 860 231 269 200 9 chr15 36167505 36167610 -67327364 + L1MB8 LINE L1 6038 6162 -16 3 860 393 250 78 84 chr15 36167721 36167887 -67327087 + L1M4 LINE L1 4086 4250 -1896 3 860 437 174 266 0 chr15 36167988 36168097 -67326877 + B1_Mur1 SINE Alu 6 143 -6 3 860 329 243 11 0 chr15 36168259 36168340 -67326634 + PB1D10 SINE Alu 1 84 -65 3 860 246 95 0 0 chr15 36168340 36168382 -67326592 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 3 860 458 246 9 43 chr15 36168476 36168591 -67326383 + RSINE1 SINE B4 4 114 -51 3 860 1250 43 0 0 chr15 36168646 36168785 -67326189 - B1_Mm SINE Alu -8 139 1 3 860 26 30 0 0 chr15 36168786 36168819 -67326155 + AT_rich Low_complexity Low_complexity 1 33 0 3 860 365 221 47 117 chr15 36168854 36168877 -67326097 + MT2B LTR ERVL 139 152 -449 3 860 661 214 0 23 chr15 36168877 36169006 -67325968 + B1_Mus2 SINE Alu 1 126 -21 3 860 777 231 140 111 chr15 36169177 36169640 -67325334 + MT2B LTR ERVL 1 601 0 3 860 583 174 18 44 chr15 36171998 36172112 -67322862 - PB1D9 SINE Alu -2 118 8 3 860 495 0 0 0 chr15 36172152 36172207 -67322767 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 860 544 277 49 43 chr15 36172238 36172400 -67322574 - B3 SINE B2 -52 164 2 3 860 22 0 0 0 chr15 36173783 36173805 -67321169 + AT_rich Low_complexity Low_complexity 1 22 0 3 860 687 268 7 7 chr15 36174345 36174488 -67320486 + B1_Mur1 SINE Alu 1 143 -6 3 861 409 321 83 60 chr15 36175873 36176138 -67318836 - L2a LINE L2 -211 3215 2945 3 861 357 43 0 0 chr15 36176569 36176616 -67318358 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 861 395 240 0 39 chr15 36176673 36176777 -67318197 + PB1D9 SINE Alu 12 111 -9 3 861 218 211 26 66 chr15 36177270 36177346 -67317628 - ID4 SINE ID -8 75 3 3 861 239 347 41 0 chr15 36177812 36177910 -67317064 + ID_B1 SINE B4 118 219 -5 3 861 488 266 0 35 chr15 36178543 36178656 -67316318 - PB1D7 SINE Alu 0 120 12 3 861 663 242 134 3 chr15 36178690 36178867 -67316107 - B3 SINE B2 0 198 2 3 861 414 234 122 0 chr15 36178878 36178985 -67315989 - ID_B1 SINE B4 -7 217 98 3 861 264 309 49 0 chr15 36179180 36179261 -67315713 - PB1D7 SINE Alu -5 115 31 3 861 556 179 0 0 chr15 36179320 36179402 -67315572 + MTD LTR MaLR 3 84 -335 3 861 877 148 28 0 chr15 36179402 36179544 -67315430 + B1_Mus1 SINE Alu 1 146 -2 3 861 825 11 0 0 chr15 36179564 36179658 -67315316 + (GGAA)n Simple_repeat Simple_repeat 3 96 0 3 861 1182 208 165 3 chr15 36179658 36179943 -67315031 + MTD LTR MaLR 72 402 -17 3 861 245 312 52 0 chr15 36179971 36180048 -67314926 - ID4 SINE ID -1 82 2 3 861 769 236 46 6 chr15 36180274 36180449 -67314525 + B3 SINE B2 2 183 -33 3 861 1619 142 62 0 chr15 36180563 36180851 -67314123 + MTC LTR MaLR 1 306 -115 3 861 667 127 18 26 chr15 36180866 36180979 -67313995 - B1_Mm SINE Alu 0 147 36 3 861 573 277 0 55 chr15 36180964 36181109 -67313865 + MTC LTR MaLR 283 419 -2 3 861 513 268 87 0 chr15 36181272 36181399 -67313575 + RSINE1 SINE B4 17 154 -11 3 861 325 226 123 3 chr15 36181486 36181587 -67313387 + PB1D9 SINE Alu 2 109 -38 3 861 788 261 111 0 chr15 36182177 36182376 -67312598 - ID_B1 SINE B4 -2 222 2 3 861 1282 47 0 0 chr15 36182462 36182610 -67312364 + B1_Mus1 SINE Alu 1 148 0 3 861 498 136 0 0 chr15 36182634 36182715 -67312259 + (GGAGAA)n Simple_repeat Simple_repeat 5 85 0 3 861 785 148 85 8 chr15 36183211 36183340 -67311634 + B1_Mur3 SINE Alu 4 142 -7 3 861 781 173 40 5 chr15 36183523 36183695 -67311279 - B3 SINE B2 0 198 27 3 861 228 109 0 113 chr15 36183691 36183753 -67311221 - B2_Mm1t SINE B2 -6 187 133 3 861 302 163 0 0 chr15 36183737 36183786 -67311188 - B2_Mm2 SINE B2 -100 95 47 3 861 1142 92 49 0 chr15 36183806 36183969 -67311005 - B2_Mm1t SINE B2 -21 172 2 4 861 950 84 149 0 chr15 36184983 36185137 -67309837 - B2_Mm2 SINE B2 -4 191 15 4 861 290 222 89 49 chr15 36185513 36185636 -67309338 + Charlie12 DNA MER1_type 48 175 -2698 4 861 471 205 36 80 chr15 36185528 36185666 -67309308 - RMER30 DNA MER1_type -64 138 7 4 861 21 0 0 0 chr15 36186386 36186407 -67308567 + AT_rich Low_complexity Low_complexity 1 21 0 4 861 702 164 9 0 chr15 36187033 36187143 -67307831 - B1_Mur3 SINE Alu -6 143 33 4 861 375 145 81 0 chr15 36187141 36187203 -67307771 + MTC LTR MaLR 355 421 0 4 861 5824 147 59 18 chr15 36187202 36188257 -67306717 + MTC-int LTR MaLR 2 1099 -159 4 861 1636 268 70 18 chr15 36188257 36188818 -67306156 - Lx6 LINE L1 -27 7433 6479 4 861 293 226 0 16 chr15 36188815 36188878 -67306096 - Lx6 LINE L1 -687 6363 6302 4 861 689 150 130 7 chr15 36188878 36189032 -67305942 + MTB_Mm-int LTR MaLR 1086 1258 0 4 861 2018 154 50 15 chr15 36189032 36189375 -67305599 + MTB_Mm LTR MaLR 1 355 -52 4 861 421 327 91 87 chr15 36189436 36189711 -67305263 + B4 SINE B4 1 276 -16 4 861 587 154 88 26 chr15 36190210 36190323 -67304651 + PB1D9 SINE Alu 1 120 0 4 861 25 0 0 0 chr15 36190445 36190470 -67304504 + AT_rich Low_complexity Low_complexity 1 25 0 4 861 736 262 155 28 chr15 36190491 36190852 -67304122 + L1MD1 LINE L1 5641 6047 -195 4 861 274 257 117 58 chr15 36190896 36191016 -67303958 - B1F1 SINE Alu 0 149 23 4 861 262 272 85 34 chr15 36191052 36191170 -67303804 + L1MD1 LINE L1 6077 6200 -159 4 861 483 260 53 37 chr15 36191224 36191412 -67303562 + ORR1C2 LTR MaLR 110 300 -84 4 861 1110 184 4 84 chr15 36191993 36192219 -67302755 + B3 SINE B2 2 209 -7 4 861 21 0 0 0 chr15 36192222 36192243 -67302731 + AT_rich Low_complexity Low_complexity 1 21 0 4 861 1527 55 0 0 chr15 36192855 36193038 -67301936 - L1_Mus1 LINE L1 -99 6468 6286 4 861 807 297 52 0 chr15 36193038 36193230 -67301744 - ID_B1 SINE B4 -22 202 1 4 861 3456 59 0 16 chr15 36193480 36193912 -67301062 - L1Md_F2 LINE L1 -2 6580 6156 4 861 342 0 0 0 chr15 36194154 36194192 -67300782 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 861 283 189 58 126 chr15 36194257 36194360 -67300614 - PB1D9 SINE Alu -24 96 1 4 861 688 284 6 56 chr15 36194360 36194447 -67300527 - B4 SINE B4 -209 83 6 4 861 276 316 13 0 chr15 36196162 36196241 -67298733 + RSINE1 SINE B4 84 163 -2 4 861 303 279 218 12 chr15 36196241 36196567 -67298407 + L1M5 LINE L1 4978 5370 -776 4 861 302 226 172 9 chr15 36196649 36196765 -67298209 + L1M5 LINE L1 5506 5640 -533 4 861 191 36 36 0 chr15 36196912 36196940 -67298034 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 4 861 416 163 138 21 chr15 36197604 36197698 -67297276 - B1_Mus2 SINE Alu -2 145 41 4 861 259 303 0 0 chr15 36197698 36197764 -67297210 + C-rich Low_complexity Low_complexity 2 67 0 4 861 376 169 0 0 chr15 36197766 36197825 -67297149 - B1_Mur4 SINE Alu -91 59 1 4 861 719 196 45 0 chr15 36197827 36197960 -67297014 - B1_Mur1 SINE Alu -1 148 10 4 861 264 167 0 0 chr15 36198001 36198049 -67296925 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 861 468 233 204 45 chr15 36198049 36198206 -67296768 - B3A SINE B2 -16 182 1 4 861 207 0 0 0 chr15 36198232 36198255 -67296719 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 4 861 599 148 215 50 chr15 36198255 36198371 -67296603 - B1_Mur2 SINE Alu -7 142 6 4 861 195 42 0 0 chr15 36198457 36198481 -67296493 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 861 651 131 200 62 chr15 36198575 36198691 -67296283 + B1_Mur2 SINE Alu 2 138 -11 4 861 180 0 0 0 chr15 36198691 36198711 -67296263 + (CAAAC)n Simple_repeat Simple_repeat 2 21 0 4 861 651 131 200 62 chr15 36198711 36198724 -67296250 + B1_Mur2 SINE Alu 139 149 0 4 861 750 298 55 52 chr15 36198763 36199053 -67295921 + B4A SINE B4 2 292 0 4 861 1337 282 66 24 chr15 36199630 36200011 -67294963 + MLT2B1 LTR ERVL 116 512 -8 4 861 394 229 64 37 chr15 36200499 36200608 -67294366 + B1_Mur2 SINE Alu 38 149 0 4 861 459 0 0 0 chr15 36200736 36200787 -67294187 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 861 365 263 0 13 chr15 36200809 36200886 -67294088 - B3A SINE B2 -122 76 1 4 861 306 0 0 0 chr15 36201127 36201161 -67293813 + (A)n Simple_repeat Simple_repeat 1 34 0 4 861 731 198 234 0 chr15 36201168 36201335 -67293639 + B3 SINE B2 5 210 -6 4 861 180 111 0 0 chr15 36201365 36201392 -67293582 + (GGAGAA)n Simple_repeat Simple_repeat 4 30 0 4 861 439 339 16 66 chr15 36201527 36201710 -67293264 - LTR33 LTR ERVL -312 203 30 4 861 596 239 129 47 chr15 36201710 36201903 -67293071 + B3 SINE B2 1 209 -7 4 861 502 162 232 62 chr15 36201937 36202049 -67292925 - B1_Mur2 SINE Alu -17 132 2 4 861 795 80 0 0 chr15 36202797 36202922 -67292052 + (CA)n Simple_repeat Simple_repeat 1 125 0 4 861 5031 149 40 40 chr15 36202941 36204090 -67290884 + MYSERV16_I-int LTR ERVK 641 2481 -361 4 861 24 0 0 0 chr15 36204139 36204163 -67290811 + AT_rich Low_complexity Low_complexity 1 24 0 4 861 319 261 79 11 chr15 36204284 36204373 -67290601 + RSINE1 SINE B4 4 98 -67 4 861 713 241 58 12 chr15 36204644 36204816 -67290158 - B3A SINE B2 -16 182 3 4 861 201 292 182 27 chr15 36205592 36205740 -67289234 - L2 LINE L2 -1053 2366 2196 4 861 321 199 132 29 chr15 36206044 36206202 -67288772 - MLT1D LTR MaLR -3 624 410 4 861 279 0 0 0 chr15 36206554 36206585 -67288389 + (A)n Simple_repeat Simple_repeat 1 31 0 4 861 1054 91 0 14 chr15 36206712 36206857 -67288117 + B1_Mm SINE Alu 5 147 0 4 861 1266 79 0 6 chr15 36206885 36207050 -67287924 + B2_Mm2 SINE B2 2 165 -30 4 861 323 114 384 0 chr15 36207049 36207153 -67287821 - B2_Mm2 SINE B2 -5 190 47 4 861 1188 95 60 0 chr15 36207166 36207334 -67287640 - B2_Mm1t SINE B2 -14 179 2 4 861 506 242 153 0 chr15 36207600 36207724 -67287250 + ID_B1 SINE B4 2 144 -80 4 861 234 78 0 89 chr15 36208085 36208141 -67286833 + T-rich Low_complexity Low_complexity 4 54 0 4 861 440 198 89 6 chr15 36208143 36208257 -67286717 - PB1D9 SINE Alu 0 120 1 4 861 1291 41 0 0 chr15 36208396 36208543 -67286431 + B1_Mus2 SINE Alu 1 147 0 4 861 1047 84 0 0 chr15 36208768 36208911 -67286063 - B1_Mus1 SINE Alu 0 148 6 4 861 398 226 21 21 chr15 36208929 36209024 -67285950 + B3 SINE B2 112 206 -10 4 861 1232 147 15 35 chr15 36209768 36209966 -67285008 + B2_Mm2 SINE B2 2 195 0 4 861 207 0 0 0 chr15 36210587 36210610 -67284364 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 861 514 244 116 16 chr15 36210669 36210798 -67284176 + B1F2 SINE Alu 1 142 -7 4 861 396 0 0 0 chr15 36211322 36211366 -67283608 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 861 23 0 0 0 chr15 36212678 36212701 -67282273 + GC_rich Low_complexity Low_complexity 1 23 0 4 861 306 254 16 33 chr15 36212898 36213020 -67281954 + (CCCCG)n Simple_repeat Simple_repeat 1 120 0 4 861 2443 143 38 5 chr15 36214122 36214522 -67280452 + MTC LTR MaLR 1 413 -8 4 861 194 323 246 8 chr15 36214732 36214866 -67280108 + MER5B DNA MER1_type 10 175 -3 4 861 747 62 0 0 chr15 36215040 36215137 -67279837 + (TCTCCC)n Simple_repeat Simple_repeat 5 101 0 4 861 454 189 115 199 chr15 36215138 36215329 -67279645 + ORR1D2 LTR MaLR 196 370 0 4 861 521 309 59 40 chr15 36215821 36216074 -67278900 - MIR SINE MIR -8 260 3 4 861 344 228 17 129 chr15 36216489 36216517 -67278457 + MT2B LTR ERVL 138 240 -361 4 861 495 176 0 34 chr15 36216517 36216605 -67278369 + B1_Mur3 SINE Alu 1 85 -64 4 861 510 17 0 0 chr15 36216605 36216664 -67278310 + (GA)n Simple_repeat Simple_repeat 1 59 0 4 861 521 205 165 0 chr15 36216677 36216804 -67278170 + B1F SINE Alu 1 148 -1 4 861 453 321 53 0 chr15 36216929 36217060 -67277914 - ID_B1 SINE B4 -86 138 1 4 861 180 0 0 0 chr15 36217646 36217666 -67277308 + (T)n Simple_repeat Simple_repeat 1 20 0 4 861 4910 76 5 7 chr15 36217787 36218399 -67276575 - L1_Mus4 LINE L1 0 6636 6026 4 861 356 273 68 61 chr15 36218695 36218843 -67276131 + MER5A DNA MER1_type 39 187 -2 4 861 811 187 14 14 chr15 36220530 36220671 -67274303 + B1_Mur1 SINE Alu 1 141 -8 4 861 294 108 46 0 chr15 36221203 36221268 -67273706 + C-rich Low_complexity Low_complexity 4 71 0 4 861 288 249 0 80 chr15 36223707 36223804 -67271170 - MTEa LTR MaLR -14 365 269 4 861 469 264 38 54 chr15 36225295 36225479 -67269495 - B3A SINE B2 -16 182 2 4 861 333 285 115 30 chr15 36226113 36226348 -67268626 + L3 LINE CR1 3696 3950 -539 4 861 495 228 35 0 chr15 36226404 36226518 -67268456 + B1F SINE Alu 14 131 -18 4 861 264 282 0 12 chr15 36226665 36226751 -67268223 + B4A SINE B4 186 270 -22 4 861 238 325 48 16 chr15 36226818 36226943 -67268031 + L3 LINE CR1 4033 4161 -328 4 861 583 174 104 0 chr15 36227319 36227434 -67267540 - B1_Mur2 SINE Alu -1 148 22 4 861 490 279 80 7 chr15 36227595 36227732 -67267242 + RSINE1 SINE B4 3 149 -16 4 861 519 336 7 0 chr15 36228835 36228978 -67265996 + ID_B1 SINE B4 81 224 0 4 861 1086 122 22 16 chr15 36229072 36229256 -67265718 + B2_Mm2 SINE B2 2 186 -9 4 861 501 300 0 0 chr15 36230228 36230348 -67264626 - B1F SINE Alu -29 120 1 4 861 226 185 13 145 chr15 36230421 36230439 -67264535 + MT2B2 LTR ERVL 151 158 -426 4 861 292 276 22 0 chr15 36230439 36230520 -67264454 + B1F1 SINE Alu 1 89 -28 4 861 375 226 165 10 chr15 36230716 36230819 -67264155 - B1_Mur1 SINE Alu -1 148 30 4 861 235 220 20 0 chr15 36230902 36230952 -67264022 + CT-rich Low_complexity Low_complexity 1 51 0 5 861 237 299 122 14 chr15 36231128 36231267 -67263707 + L1M5 LINE L1 5593 5746 -378 5 861 387 292 47 40 chr15 36231611 36231761 -67263213 + B4A SINE B4 5 155 -137 5 861 294 234 200 15 chr15 36231814 36231944 -67263030 + B3A SINE B2 3 156 -42 5 861 216 0 0 0 chr15 36231953 36231977 -67262997 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 861 1077 171 97 10 chr15 36232204 36232411 -67262563 - URR1B DNA MER1_type 0 225 1 5 861 414 0 0 0 chr15 36233053 36233099 -67261875 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 861 227 318 0 0 chr15 36233118 36233184 -67261790 - RSINE1 SINE B4 -96 69 4 5 861 289 231 123 19 chr15 36233357 36233463 -67261511 - B3A SINE B2 -16 182 66 5 861 1720 107 79 7 chr15 36233499 36233790 -67261184 - ORR1B1 LTR MaLR -81 313 2 5 861 226 306 61 0 chr15 36234429 36234527 -67260447 - Tigger15a DNA TcMar -333 382 279 5 861 931 246 9 31 chr15 36235056 36235278 -67259696 - ID_B1 SINE B4 -3 221 5 5 861 285 29 0 0 chr15 36235635 36235669 -67259305 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 5 861 353 252 180 10 chr15 36236465 36236711 -67258263 + L1ME1 LINE L1 4993 5288 -858 5 861 544 201 276 11 chr15 36236712 36236882 -67258092 + B3 SINE B2 1 215 -1 5 861 333 237 68 0 chr15 36236889 36237007 -67257967 + L1ME1 LINE L1 5271 5396 -783 5 861 489 252 75 108 chr15 36237076 36237231 -67257743 - Tigger5 DNA MER2_type -63 2343 2194 5 861 1361 66 39 6 chr15 36237231 36237413 -67257561 - B2_Mm2 SINE B2 -7 188 1 5 861 489 252 75 108 chr15 36237413 36237497 -67257477 - Tigger5 DNA MER2_type -213 2193 2112 5 861 295 296 71 8 chr15 36237486 36237612 -67257362 - Tigger5 DNA MER2_type -2234 172 39 5 861 243 146 0 0 chr15 36237706 36237747 -67257227 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 861 502 289 125 79 chr15 36238724 36239077 -67255897 + L1ME1 LINE L1 5637 6005 -174 5 861 616 197 12 43 chr15 36239129 36239151 -67255823 + ID_B1 SINE B4 66 223 0 5 861 1109 21 7 0 chr15 36239151 36239292 -67255682 + B1_Mus1 SINE Alu 7 148 0 5 861 245 29 29 0 chr15 36239295 36239329 -67255645 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 861 2082 244 92 29 chr15 36239624 36240245 -67254729 - Lx4A LINE L1 0 7058 6399 5 861 498 266 29 7 chr15 36240673 36240813 -67254161 - B1F SINE Alu -6 143 1 5 861 394 273 86 7 chr15 36241145 36241285 -67253689 + MLT1A1 LTR MaLR 256 406 -2 5 861 586 291 90 22 chr15 36241495 36241772 -67253202 + L1MC4 LINE L1 7376 7671 -371 5 861 23 68 0 0 chr15 36241976 36242020 -67252954 + AT_rich Low_complexity Low_complexity 1 44 0 5 861 462 196 62 0 chr15 36242752 36242849 -67252125 + ORR1D2 LTR MaLR 3 105 -265 5 861 456 212 131 33 chr15 36242843 36242965 -67252009 + ORR1D2 LTR MaLR 237 370 0 5 861 305 24 24 0 chr15 36243756 36243798 -67251176 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 5 861 582 235 97 19 chr15 36243808 36244000 -67250974 - MTD LTR MaLR -20 399 181 5 861 8149 43 4 0 chr15 36244000 36245305 -67249669 - L1Md_F2 LINE L1 -13 6569 5257 5 861 341 318 54 9 chr15 36245309 36245420 -67249554 - MTD LTR MaLR -230 189 74 5 861 368 316 36 56 chr15 36245465 36245745 -67249229 - MLT2B5 LTR ERVL -259 295 29 5 861 1543 278 98 25 chr15 36245758 36246360 -67248614 - MERVL_2A-int LTR ERVL 0 5714 5069 5 861 268 108 0 0 chr15 36246769 36246806 -67248168 - MERVL_2A-int LTR ERVL -645 5069 5033 5 861 2943 268 132 21 chr15 36246811 36248916 -67246058 - MERVL_2A-int LTR ERVL -1780 3977 1686 5 861 252 272 126 32 chr15 36249449 36249544 -67245430 + MLT1A1 LTR MaLR 269 372 -36 5 861 43 20 0 0 chr15 36249673 36249723 -67245251 + AT_rich Low_complexity Low_complexity 1 50 0 5 861 244 185 0 18 chr15 36249738 36249793 -67245181 + MLT1A1 LTR MaLR 355 408 0 5 861 227 29 0 54 chr15 36249877 36249914 -67245060 + (TTTG)n Simple_repeat Simple_repeat 4 38 0 5 861 425 243 203 14 chr15 36250043 36250181 -67244793 - RSINE1 SINE B4 0 165 2 5 861 524 231 6 0 chr15 36250194 36250350 -67244624 + (TCTG)n Simple_repeat Simple_repeat 2 158 0 5 861 838 187 0 0 chr15 36250355 36250494 -67244480 - B1_Mur1 SINE Alu -9 140 2 5 861 1024 239 18 5 chr15 36251010 36251229 -67243745 + ID_B1 SINE B4 3 224 0 5 861 235 173 19 19 chr15 36251264 36251317 -67243657 + C-rich Low_complexity Low_complexity 6 58 0 5 861 983 5 74 0 chr15 36253791 36254007 -67240967 + (TG)n Simple_repeat Simple_repeat 1 231 0 5 861 21 0 0 0 chr15 36254059 36254080 -67240894 + AT_rich Low_complexity Low_complexity 1 21 0 5 861 2312 86 94 137 chr15 36254321 36254647 -67240327 - RLTR23 LTR ERV1 -2 428 102 5 861 183 42 0 0 chr15 36254647 36254671 -67240303 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 861 2312 86 94 137 chr15 36254671 36254791 -67240183 - RLTR23 LTR ERV1 -329 101 1 5 861 303 270 0 0 chr15 36255088 36255162 -67239812 - RLTR24 LTR ERV1 -454 75 2 5 861 2067 92 113 5 chr15 36255538 36255908 -67239066 - RLTR47_MM LTR ERV1 -68 464 55 5 861 978 299 37 16 chr15 36256033 36256460 -67238514 - RLTR6-int LTR ERV1 -69 7709 7081 5 861 300 360 40 12 chr15 36256702 36256952 -67238022 - RLTR6-int LTR ERV1 -1991 5610 5354 5 861 843 258 140 8 chr15 36257142 36257392 -67237582 - B4 SINE B4 -1 291 9 5 861 1130 44 0 0 chr15 36258140 36258276 -67236698 - B1_Mm SINE Alu -11 136 1 5 861 338 322 43 30 chr15 36258281 36258515 -67236459 - L1M4 LINE L1 -631 5553 5317 5 861 275 156 46 44 chr15 36258989 36259078 -67235896 - PB1D10 SINE Alu -36 113 20 5 861 22 0 0 0 chr15 36259114 36259136 -67235838 + AT_rich Low_complexity Low_complexity 1 22 0 5 861 651 273 0 0 chr15 36259270 36259409 -67235565 + B3A SINE B2 1 139 -59 5 861 297 257 9 56 chr15 36259419 36259526 -67235448 + PB1D7 SINE Alu 12 113 -7 5 861 315 296 58 43 chr15 36260072 36260210 -67234764 - MER20 DNA MER1_type -25 194 55 5 861 345 314 79 16 chr15 36261694 36261820 -67233154 + RSINE1 SINE B4 2 135 -30 5 861 356 39 58 0 chr15 36262139 36262191 -67232783 + (TTTTC)n Simple_repeat Simple_repeat 2 56 0 5 861 315 0 0 0 chr15 36262432 36262467 -67232507 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 861 635 254 41 36 chr15 36262530 36262548 -67232426 - B3A SINE B2 0 198 182 5 861 488 59 15 0 chr15 36262548 36262616 -67232358 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 861 635 254 41 36 chr15 36262616 36262793 -67232181 - B3A SINE B2 -17 181 2 5 861 247 280 51 93 chr15 36262797 36262915 -67232059 - Cheshire DNA MER1_type -2138 282 170 5 861 910 176 0 13 chr15 36262915 36263065 -67231909 + B1_Mur2 SINE Alu 2 149 0 5 861 185 300 86 0 chr15 36263580 36263650 -67231324 + MIRc SINE MIR 50 125 -143 5 861 585 0 0 0 chr15 36265166 36265231 -67229743 + (TC)n Simple_repeat Simple_repeat 1 65 0 5 861 478 176 35 53 chr15 36265865 36265979 -67228995 + PB1D10 SINE Alu 5 116 -1 5 861 183 162 0 0 chr15 36266822 36266859 -67228115 + CT-rich Low_complexity Low_complexity 2 38 0 5 861 263 239 178 8 chr15 36266872 36266990 -67227984 - B1F1 SINE Alu -11 138 1 5 861 444 242 20 0 chr15 36267133 36267232 -67227742 - RSINE1 SINE B4 -17 148 48 5 861 254 295 13 0 chr15 36268379 36268457 -67226517 - ID4_ SINE ID 0 83 5 5 861 899 175 88 0 chr15 36268790 36268961 -67226013 + B2_Mm2 SINE B2 1 186 -9 5 861 504 195 8 58 chr15 36269077 36269197 -67225777 - PB1D9 SINE Alu -1 119 6 5 861 724 258 71 15 chr15 36269214 36269411 -67225563 - B3 SINE B2 0 216 9 5 861 343 260 40 40 chr15 36270386 36270486 -67224488 + B4 SINE B4 193 292 0 5 861 28 48 0 0 chr15 36270640 36270682 -67224292 + AT_rich Low_complexity Low_complexity 1 42 0 5 861 484 254 17 8 chr15 36271117 36271236 -67223738 + B3A SINE B2 1 120 -78 5 861 1700 149 136 31 chr15 36271466 36271603 -67223371 - RMER10B LTR ERVL 0 398 235 5 861 864 127 0 0 chr15 36271603 36271745 -67223229 + (GA)n Simple_repeat Simple_repeat 2 143 0 5 861 1700 149 136 31 chr15 36271745 36271967 -67223007 - RMER10B LTR ERVL -164 234 1 5 861 521 178 25 25 chr15 36273178 36273458 -67221516 + (TG)n Simple_repeat Simple_repeat 1 279 0 5 861 444 292 78 56 chr15 36273490 36273758 -67221216 - B4A SINE B4 -17 275 2 5 861 360 0 0 0 chr15 36273914 36273954 -67221020 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 861 387 0 0 0 chr15 36274354 36274397 -67220577 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 861 396 344 41 25 chr15 36274403 36274600 -67220374 + L1MB7 LINE L1 5830 6029 -155 5 861 1463 45 50 0 chr15 36274858 36275037 -67219937 + B2_Mm2 SINE B2 1 188 -7 5 861 392 330 0 10 chr15 36275118 36275222 -67219752 - PB1D10 SINE Alu -9 108 6 5 861 326 267 64 124 chr15 36275240 36275522 -67219452 - L1MB3 LINE L1 -47 6136 5872 5 861 376 131 272 39 chr15 36275614 36275630 -67219344 - B1_Mur2 SINE Alu 0 149 137 5 861 330 26 0 0 chr15 36275630 36275669 -67219305 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 5 861 376 131 272 39 chr15 36275669 36275755 -67219219 - B1_Mur2 SINE Alu -13 136 23 5 861 806 10 0 0 chr15 36276675 36276776 -67218198 - L1Md_T LINE L1 0 6582 6482 5 861 346 312 37 0 chr15 36276849 36276958 -67218016 + RSINE1 SINE B4 1 113 -52 5 861 21 57 0 0 chr15 36276970 36277005 -67217969 + AT_rich Low_complexity Low_complexity 1 35 0 5 861 410 301 58 6 chr15 36278172 36278346 -67216628 - LTR82B Low_complexity ERVL -135 695 513 5 861 722 255 50 50 chr15 36278519 36278721 -67216253 - ID_B1 SINE B4 -21 203 2 5 861 950 281 62 140 chr15 36278808 36279450 -67215524 - RLTR18 LTR ERVK -9 607 16 5 861 275 302 153 6 chr15 36279482 36279645 -67215329 - LTR82B Low_complexity ERVL -643 187 1 5 861 220 278 0 0 chr15 36279809 36279863 -67215111 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 861 180 216 0 0 chr15 36280131 36280182 -67214792 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 861 205 280 0 29 chr15 36280193 36280329 -67214645 + (TATG)n Simple_repeat Simple_repeat 4 135 0 5 861 311 278 0 11 chr15 36280302 36280484 -67214490 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 861 774 270 47 61 chr15 36280510 36280806 -67214168 - B4 SINE B4 0 292 1 5 861 200 86 29 0 chr15 36281484 36281519 -67213455 + (CCCCCA)n Simple_repeat Simple_repeat 6 41 0 5 861 501 17 0 0 chr15 36281933 36281991 -67212983 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 861 709 242 18 24 chr15 36282150 36282319 -67212655 + B3A SINE B2 5 172 -26 6 861 546 304 33 33 chr15 36282344 36282384 -67212590 + B4A SINE B4 71 106 -186 6 861 1409 171 73 38 chr15 36282384 36282780 -67212194 - RMER17C LTR ERVK 0 410 1 6 861 546 304 33 33 chr15 36282780 36282953 -67212021 + B4A SINE B4 107 284 -8 6 861 270 0 0 0 chr15 36282958 36282988 -67211986 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 861 417 179 0 0 chr15 36285583 36285667 -67209307 + (CA)n Simple_repeat Simple_repeat 2 85 0 6 861 1420 189 0 0 chr15 36285708 36285952 -67209022 + L1VL1 LINE L1 1 244 -6178 6 861 24181 89 16 3 chr15 36285954 36288073 -67206901 + L1_Mus3 LINE L1 2488 4635 -1248 6 861 219 36 0 0 chr15 36288073 36288101 -67206873 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 861 24181 80 10 2 chr15 36288101 36290081 -67204893 + L1_Mus3 LINE L1 4636 6635 -3 6 861 764 161 0 11 chr15 36291783 36291965 -67203009 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 861 239 336 34 42 chr15 36292077 36292195 -67202779 - MIR SINE MIR -60 148 32 6 861 914 222 43 5 chr15 36292726 36292934 -67202040 - B3 SINE B2 0 216 1 6 861 360 0 0 0 chr15 36293337 36293377 -67201597 + (CAAA)n Simple_repeat Simple_repeat 4 43 0 6 861 373 245 9 70 chr15 36293417 36293531 -67201443 + PB1D10 SINE Alu 3 109 -8 6 861 328 358 8 8 chr15 36293596 36293720 -67201254 + MLT1K LTR MaLR 399 522 -73 6 861 428 249 95 47 chr15 36293752 36293921 -67201053 - MER53 DNA hAT -14 179 3 6 861 486 0 0 0 chr15 36294219 36294273 -67200701 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 861 549 263 7 49 chr15 36294273 36294417 -67200557 - RSINE1 SINE B4 -25 140 3 6 861 734 162 73 0 chr15 36295093 36295229 -67199745 - B1_Mus1 SINE Alu -2 146 1 6 861 2566 129 78 25 chr15 36295740 36296176 -67198798 + RMER6B LTR ERVK 1 459 -2 6 861 1081 254 75 6 chr15 36297092 36297425 -67197549 - ORR1E LTR MaLR 0 359 4 6 861 295 215 58 0 chr15 36297513 36297595 -67197379 - B1F SINE Alu -6 143 45 6 861 810 0 0 0 chr15 36298243 36298333 -67196641 + (TTC)n Simple_repeat Simple_repeat 2 91 0 6 861 13693 72 21 11 chr15 36298400 36300342 -67194632 - MusHAL1 LINE L1 -627 2085 126 6 861 229 122 0 47 chr15 36300349 36300392 -67194582 + ID_B1 SINE B4 184 224 0 6 861 207 160 0 39 chr15 36300650 36300702 -67194272 + T-rich Low_complexity Low_complexity 3 52 0 6 861 675 127 0 0 chr15 36300997 36301115 -67193859 + (CA)n Simple_repeat Simple_repeat 2 119 0 6 861 2142 139 101 0 chr15 36301641 36301986 -67192988 + RLTR14 LTR ERV1 3 382 0 6 861 231 200 54 147 chr15 36301986 36302115 -67192859 + LTR48 LTR ERV1 643 759 -28 6 861 3789 57 0 21 chr15 36302275 36302760 -67192214 + L1_Mus2 LINE L1 6092 6566 0 6 861 662 184 0 140 chr15 36302787 36302896 -67192078 + B1_Mur2 SINE Alu 3 90 -59 6 861 1254 179 9 22 chr15 36302896 36303124 -67191850 + URR1B DNA MER1_type 1 225 0 6 861 662 184 0 140 chr15 36303124 36303185 -67191789 + B1_Mur2 SINE Alu 91 149 0 6 861 254 148 19 0 chr15 36303185 36303239 -67191735 + GA-rich Low_complexity Low_complexity 2 56 0 6 861 183 139 0 0 chr15 36303627 36303663 -67191311 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 6 861 261 228 18 0 chr15 36305473 36305530 -67189444 + C-rich Low_complexity Low_complexity 5 62 0 6 861 227 199 58 19 chr15 36305541 36305695 -67189279 + CT-rich Low_complexity Low_complexity 3 162 0 6 861 312 276 81 157 chr15 36305878 36306063 -67188911 + B4 SINE B4 53 223 -69 6 861 615 158 65 28 chr15 36305927 36306069 -67188905 + B1_Mm SINE Alu 6 149 0 6 862 25 31 0 0 chr15 36307024 36307056 -67187918 + AT_rich Low_complexity Low_complexity 1 32 0 6 862 370 277 76 21 chr15 36307093 36307237 -67187737 + MLT1B LTR MaLR 30 181 -209 6 862 1425 248 9 0 chr15 36307245 36307560 -67187414 + MTD LTR MaLR 8 325 -94 6 862 846 124 22 7 chr15 36307576 36307714 -67187260 - B1_Mur4 SINE Alu -2 148 9 6 862 377 209 12 0 chr15 36307729 36307815 -67187159 + MTD LTR MaLR 333 419 0 6 862 272 210 86 0 chr15 36307815 36307891 -67187083 + MLT1B LTR MaLR 190 272 -118 6 862 1728 160 84 3 chr15 36307904 36308236 -67186738 - ORR1B2 LTR MaLR -8 359 1 6 862 348 261 80 18 chr15 36308236 36308339 -67186635 + MLT1B LTR MaLR 276 385 -5 6 862 1432 202 62 14 chr15 36308427 36308784 -67186190 + RLTR11A2 LTR ERVK 152 525 -2 6 862 600 258 84 6 chr15 36309008 36309187 -67185787 + B3A SINE B2 1 193 -5 6 862 298 375 84 113 chr15 36309311 36309796 -67185178 + MLT1N2 LTR MaLR 40 510 -52 6 862 502 191 99 5 chr15 36309884 36310012 -67184962 - L1MB4 LINE L1 -2 6178 6031 6 862 333 230 92 0 chr15 36311676 36311763 -67183211 - MTE2b LTR MaLR -83 296 202 6 862 641 227 164 12 chr15 36312209 36312374 -67182600 + B4 SINE B4 1 190 -102 6 862 1862 134 56 18 chr15 36312380 36312721 -67182253 - ORR1B1 LTR MaLR 0 394 41 6 862 332 50 0 0 chr15 36312985 36313025 -67181949 + (TC)n Simple_repeat Simple_repeat 2 41 0 6 862 854 137 7 0 chr15 36313025 36313171 -67181803 + (TTCC)n Simple_repeat Simple_repeat 3 149 0 6 862 214 250 50 0 chr15 36313175 36313235 -67181739 - L2a LINE L2 -255 3171 3109 6 862 2760 172 125 21 chr15 36313290 36314005 -67180969 + RLTR13D1 LTR ERVK 1 806 0 6 862 300 352 9 0 chr15 36314006 36314111 -67180863 - L2a LINE L2 -355 3071 2966 6 862 387 0 0 0 chr15 36314294 36314337 -67180637 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 862 824 205 56 40 chr15 36314345 36314543 -67180431 - B3 SINE B2 -15 201 1 6 862 330 230 0 86 chr15 36314682 36314697 -67180277 - B4 SINE B4 -134 158 86 6 862 387 154 62 0 chr15 36314697 36314762 -67180212 - B1_Mus2 SINE Alu -78 69 1 6 862 1197 89 21 12 chr15 36314770 36314979 -67179995 + Lx2 LINE L1 1876 2082 -3801 6 862 17139 134 34 20 chr15 36314978 36318869 -67176105 + Lx2 LINE L1 2747 6686 -311 6 862 561 42 0 0 chr15 36318869 36318941 -67176033 + (CA)n Simple_repeat Simple_repeat 2 73 0 6 862 9853 102 15 9 chr15 36318941 36319233 -67175741 + Lx2 LINE L1 6687 6996 -1 6 862 443 274 54 78 chr15 36319252 36319370 -67175604 + B3A SINE B2 34 152 -43 6 862 321 68 0 0 chr15 36319370 36319414 -67175560 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 862 1628 164 132 38 chr15 36319419 36319812 -67175162 - RLTR23 LTR ERV1 0 430 1 6 862 246 274 54 78 chr15 36319812 36319853 -67175121 + B2_Mm2 SINE B2 157 195 0 6 862 2412 176 90 12 chr15 36320339 36320829 -67174145 + RLTR11A LTR ERVK 1 528 0 6 862 243 0 0 0 chr15 36320873 36320900 -67174074 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 862 375 271 0 34 chr15 36320906 36320994 -67173980 - Lx8 LINE L1 -1104 6369 6285 6 862 426 257 57 0 chr15 36321054 36321159 -67173815 - RSINE1 SINE B4 -43 122 12 6 862 184 320 77 0 chr15 36321438 36321516 -67173458 + MIRc SINE MIR 131 214 -54 6 862 296 246 21 14 chr15 36321668 36321812 -67173162 + (CCA)n Simple_repeat Simple_repeat 1 145 0 6 862 556 196 5 43 chr15 36321826 36322013 -67172961 + (CCA)n Simple_repeat Simple_repeat 1 180 0 6 862 253 311 0 13 chr15 36322022 36322097 -67172877 + (CACCAT)n Simple_repeat Simple_repeat 1 74 0 6 862 191 327 61 43 chr15 36322410 36322573 -67172401 + L2 LINE L2 2731 2896 -523 6 862 198 91 0 0 chr15 36322945 36322978 -67171996 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 6 862 260 320 79 10 chr15 36323015 36323116 -67171858 + RSINE1 SINE B4 37 144 -21 6 862 554 68 0 11 chr15 36323254 36323343 -67171631 + (CAAAA)n Simple_repeat Simple_repeat 1 88 0 6 862 651 181 92 53 chr15 36323349 36323501 -67171473 - RLTR20D LTR ERVK 0 578 421 6 862 754 214 190 40 chr15 36323480 36323733 -67171241 - RLTR20D LTR ERVK -277 291 1 6 862 1897 182 75 8 chr15 36324147 36324539 -67170435 - MTD LTR MaLR -15 404 1 6 862 275 34 48 48 chr15 36325045 36325107 -67169867 + (TTTG)n Simple_repeat Simple_repeat 2 63 0 6 862 527 202 27 27 chr15 36325109 36325297 -67169677 - RMER17C LTR ERVK -135 275 88 6 862 226 203 56 28 chr15 36325409 36325480 -67169494 + B1_Mur4 SINE Alu 23 95 -55 6 862 358 269 7 36 chr15 36326342 36326481 -67168493 - MIR SINE MIR -47 215 81 6 862 448 285 19 62 chr15 36326935 36327096 -67167878 + B4A SINE B4 1 154 -138 6 862 410 224 8 101 chr15 36327498 36327627 -67167347 + PB1D10 SINE Alu 1 117 0 6 862 250 276 13 0 chr15 36327721 36327797 -67167177 + (TA)n Simple_repeat Simple_repeat 1 77 0 6 862 722 313 50 42 chr15 36327797 36328057 -67166917 + B4A SINE B4 31 292 0 6 862 216 0 0 0 chr15 36328065 36328089 -67166885 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 862 193 300 0 0 chr15 36328089 36328139 -67166835 - L2b LINE L2 -13 3362 3313 6 862 468 0 0 0 chr15 36328310 36328362 -67166612 + (TC)n Simple_repeat Simple_repeat 1 52 0 6 862 405 0 0 0 chr15 36328362 36328406 -67166568 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 862 328 260 140 100 chr15 36328752 36329102 -67165872 + ORSL-2b DNA Tip100 107 470 -38 6 862 602 275 102 13 chr15 36330848 36331073 -67163901 - MLT1D LTR MaLR 0 505 261 6 862 369 274 95 46 chr15 36332629 36332902 -67162072 + MLT1B LTR MaLR 71 338 -52 6 862 385 340 93 0 chr15 36332923 36333073 -67161901 - RSINE1 SINE B4 0 165 2 6 862 223 271 87 65 chr15 36333119 36333226 -67161748 + L2a LINE L2 3278 3410 -16 6 862 527 331 79 38 chr15 36333997 36334345 -67160629 - ORR1E LTR MaLR -10 369 1 6 862 186 43 0 0 chr15 36334359 36334382 -67160592 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 862 857 144 293 0 chr15 36334413 36334580 -67160394 + B3 SINE B2 1 216 0 6 862 515 314 75 11 chr15 36334751 36334925 -67160049 + B3A SINE B2 1 185 -13 6 862 238 206 29 0 chr15 36336240 36336308 -67158666 + CT-rich Low_complexity Low_complexity 5 74 0 6 862 1595 150 119 29 chr15 36336416 36336505 -67158469 - ORR1D1 LTR MaLR 0 374 285 6 862 3223 41 23 5 chr15 36336505 36336894 -67158080 + MTA_Mm LTR MaLR 1 396 0 6 862 1595 150 119 29 chr15 36336894 36337147 -67157827 - ORR1D1 LTR MaLR -90 284 1 6 862 372 333 36 6 chr15 36337219 36337385 -67157589 - L2c LINE L2 -201 3186 3016 7 862 202 338 80 0 chr15 36337489 36337628 -67157346 - MIRb SINE MIR -1 267 111 7 862 3960 61 0 0 chr15 36338047 36338521 -67156453 - L1_Mus1 LINE L1 0 6567 6094 7 862 964 141 7 7 chr15 36339196 36339346 -67155628 + B1_Mur4 SINE Alu 1 150 0 7 862 258 211 70 0 chr15 36340267 36340338 -67154636 + L1M3 LINE L1 5633 5708 -472 7 862 2301 82 3 51 chr15 36340490 36340861 -67154113 + Lx LINE L1 6268 6620 -34 7 862 206 32 32 0 chr15 36340861 36340892 -67154082 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 7 862 207 0 0 0 chr15 36340915 36340938 -67154036 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 862 239 243 139 9 chr15 36340942 36341050 -67153924 - L1MB4 LINE L1 -710 6075 5954 7 862 1138 75 0 7 chr15 36341074 36341222 -67153752 - B1_Mus1 SINE Alu 0 148 2 7 862 378 109 0 0 chr15 36341328 36341383 -67153591 - B3 SINE B2 -160 56 2 7 862 461 254 16 48 chr15 36341438 36341562 -67153412 - ID_B1 SINE B4 0 224 105 7 862 347 351 40 10 chr15 36341673 36341975 -67152999 - L1MB4 LINE L1 -891 5856 5546 7 862 261 286 16 32 chr15 36341981 36342104 -67152870 - L1MB4 LINE L1 -4585 2164 2044 7 862 831 262 142 3 chr15 36342592 36342910 -67152064 - L1MB4 LINE L1 -6140 467 106 7 862 423 38 0 0 chr15 36342922 36342975 -67151999 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 862 21 57 0 0 chr15 36343047 36343082 -67151892 + AT_rich Low_complexity Low_complexity 1 35 0 7 862 920 263 101 79 chr15 36343961 36344187 -67150787 - MTE2b LTR MaLR -4 375 146 7 862 817 198 154 0 chr15 36344187 36344369 -67150605 - B3 SINE B2 -5 211 2 7 862 920 263 101 79 chr15 36344369 36344509 -67150465 - MTE2b LTR MaLR -234 145 2 7 862 208 105 0 50 chr15 36345400 36345440 -67149534 + A-rich Low_complexity Low_complexity 5 42 0 7 862 341 272 42 39 chr15 36345832 36345936 -67149038 + PB1D10 SINE Alu 7 108 -9 7 862 354 229 16 0 chr15 36345943 36346004 -67148970 + ID4 SINE ID 11 72 -11 7 862 319 266 16 110 chr15 36346574 36346728 -67148246 + MIRb SINE MIR 37 176 -100 7 862 937 316 66 9 chr15 36346843 36347191 -67147783 + MLT1B LTR MaLR 9 376 -14 7 862 346 42 0 0 chr15 36349067 36349115 -67145859 + L1_Mus2 LINE L1 6518 6565 -1 7 862 296 247 14 0 chr15 36351292 36351365 -67143609 + MIR SINE MIR 34 107 -155 7 862 341 312 110 14 chr15 36351492 36351638 -67143336 + MLT1A1 LTR MaLR 21 180 -228 7 862 196 336 138 8 chr15 36354024 36354147 -67140827 + MIRc SINE MIR 17 155 -113 7 862 788 325 73 27 chr15 36354723 36355052 -67139922 + MER2 DNA MER2_type 2 345 0 7 862 360 273 98 15 chr15 36355198 36355334 -67139640 + B4 SINE B4 78 281 -11 7 862 200 111 28 0 chr15 36355395 36355431 -67139543 + (GGAA)n Simple_repeat Simple_repeat 2 38 0 7 862 385 240 70 0 chr15 36355435 36355535 -67139439 + B1_Mur1 SINE Alu 43 149 0 7 862 25 0 0 0 chr15 36356043 36356068 -67138906 + AT_rich Low_complexity Low_complexity 1 25 0 7 862 229 304 31 6 chr15 36356110 36356272 -67138702 - Lx9 LINE L1 -40 7604 7439 7 862 520 173 19 31 chr15 36356274 36356435 -67138539 + (CATA)n Simple_repeat Simple_repeat 4 162 0 7 862 809 89 40 14 chr15 36356517 36356665 -67138309 + (TCTCCC)n Simple_repeat Simple_repeat 6 157 0 7 862 417 288 51 0 chr15 36356746 36356864 -67138110 - Lx9 LINE L1 -469 7175 7052 7 862 802 150 6 104 chr15 36358162 36358326 -67136648 - B1_Mur4 SINE Alu -2 148 1 7 862 714 252 64 10 chr15 36358532 36358736 -67136238 + B3 SINE B2 2 216 0 7 862 2079 208 9 24 chr15 36358988 36359411 -67135563 + MTC LTR MaLR 1 417 -4 7 862 708 312 39 77 chr15 36359666 36360003 -67134971 - RLTR17 LTR ERVK -253 439 116 7 862 181 227 45 0 chr15 36360339 36360383 -67134591 - MIRb SINE MIR -191 77 32 7 862 244 297 53 26 chr15 36360577 36360653 -67134321 - PB1D10 SINE Alu -16 101 24 7 862 367 350 108 6 chr15 36360713 36360871 -67134103 + B3A SINE B2 24 197 -1 7 862 3733 93 0 13 chr15 36361061 36361582 -67133392 + L1Md_F2 LINE L1 6068 6581 -1 7 862 232 190 24 48 chr15 36361616 36361699 -67133275 + T-rich Low_complexity Low_complexity 2 82 0 7 862 564 258 23 8 chr15 36361724 36361857 -67133117 - ID_B1 SINE B4 -23 201 67 7 862 311 274 106 12 chr15 36361852 36361937 -67133037 - ID_B1 SINE B4 -109 115 23 7 862 462 114 0 0 chr15 36363451 36363521 -67131453 + (TA)n Simple_repeat Simple_repeat 2 71 0 7 862 677 310 42 29 chr15 36363526 36363797 -67131177 - ID_B1 SINE B4 0 292 2 7 862 522 332 70 16 chr15 36363822 36364064 -67130910 - MIRb SINE MIR 0 268 14 7 862 21 0 0 0 chr15 36364114 36364135 -67130839 + AT_rich Low_complexity Low_complexity 1 21 0 7 862 602 229 52 82 chr15 36364135 36364331 -67130643 - B3A SINE B2 0 216 20 7 862 224 189 0 0 chr15 36365697 36365734 -67129240 + B1_Mus2 SINE Alu 85 121 -26 7 862 442 318 83 73 chr15 36365913 36366215 -67128759 + ORR1E LTR MaLR 1 305 -54 7 862 2677 91 68 8 chr15 36366215 36366613 -67128361 - BGLII_Mus LTR ERVK 0 422 1 7 862 246 244 96 60 chr15 36366613 36366636 -67128338 + ORR1E LTR MaLR 320 341 -38 7 862 602 251 196 0 chr15 36366666 36366845 -67128129 - B3 SINE B2 -2 214 1 7 862 522 300 0 48 chr15 36366921 36367149 -67127825 + (CA)n Simple_repeat Simple_repeat 1 217 0 7 862 580 248 80 55 chr15 36367231 36367477 -67127497 + MLT1D LTR MaLR 227 504 -1 7 862 317 340 103 57 chr15 36367531 36367793 -67127181 + MTEa LTR MaLR 58 331 -48 7 862 576 169 28 0 chr15 36367922 36368028 -67126946 + PB1D9 SINE Alu 1 113 -36 7 862 301 260 64 46 chr15 36368645 36368754 -67126220 + L1M5 LINE L1 2114 2224 -3922 7 862 498 46 0 0 chr15 36369572 36369637 -67125337 + (TG)n Simple_repeat Simple_repeat 2 66 0 7 862 360 304 53 97 chr15 36370511 36370776 -67124198 + MTE2a LTR MaLR 87 361 -18 7 862 185 0 40 0 chr15 36370776 36370801 -67124173 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 862 191 262 0 12 chr15 36371846 36371927 -67123047 + GA-rich Low_complexity Low_complexity 1 80 0 7 862 281 158 0 26 chr15 36371916 36371994 -67122980 + (CAGA)n Simple_repeat Simple_repeat 2 77 0 7 862 922 197 0 80 chr15 36372749 36372937 -67122037 - B3 SINE B2 -1 215 43 7 862 266 391 38 66 chr15 36373099 36373310 -67121664 + MLT1J2 LTR MaLR 237 441 -7 7 862 399 214 261 17 chr15 36373595 36373714 -67121260 + B1_Mur1 SINE Alu 2 149 0 7 862 330 237 29 49 chr15 36373751 36373853 -67121121 + PB1D10 SINE Alu 3 102 -15 7 862 253 255 126 10 chr15 36373762 36373865 -67121109 + B4A SINE B4 92 206 -86 7 862 450 94 0 0 chr15 36373886 36373950 -67121024 + (CA)n Simple_repeat Simple_repeat 2 65 0 7 862 561 30 0 0 chr15 36373960 36374027 -67120947 + (GA)n Simple_repeat Simple_repeat 1 67 0 7 862 616 279 93 0 chr15 36374328 36374532 -67120442 + ID_B1 SINE B4 2 224 0 7 862 340 192 55 0 chr15 36374562 36374635 -67120339 + B4 SINE B4 8 84 -208 7 862 1163 160 174 22 chr15 36374671 36374982 -67119992 - ORR1C2 LTR MaLR 0 384 12 7 862 543 250 115 17 chr15 36375014 36375200 -67119774 - B3A SINE B2 -1 194 3 7 862 1237 164 51 0 chr15 36377072 36377286 -67117688 - URR1B DNA MER1_type 0 225 1 7 862 256 311 102 51 chr15 36377841 36378017 -67116957 - MIRb SINE MIR -55 213 29 7 862 495 0 0 0 chr15 36378023 36378078 -67116896 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 862 419 201 7 0 chr15 36378802 36378951 -67116023 + (CA)n Simple_repeat Simple_repeat 1 150 0 7 862 192 77 0 0 chr15 36379667 36379693 -67115281 + (TCC)n Simple_repeat Simple_repeat 3 28 0 7 862 512 237 9 0 chr15 36379728 36379842 -67115132 - PB1D10 SINE Alu -1 116 2 7 862 294 208 42 0 chr15 36381012 36381084 -67113890 - B4 SINE B4 -2 290 216 7 862 1058 29 72 22 chr15 36381125 36381264 -67113710 - B1_Mus2 SINE Alu 0 147 2 7 862 679 240 143 27 chr15 36381265 36381488 -67113486 - B4 SINE B4 -43 249 1 7 862 291 321 137 59 chr15 36381780 36382035 -67112939 - MER31B LTR ERV1 -173 293 19 7 862 1310 149 38 9 chr15 36382801 36383011 -67111963 + B3 SINE B2 1 216 0 7 862 389 199 0 7 chr15 36384171 36384308 -67110666 + (CA)n Simple_repeat Simple_repeat 2 137 0 7 862 208 303 0 0 chr15 36385084 36385160 -67109814 + G-rich Low_complexity Low_complexity 1 76 0 7 862 746 263 187 0 chr15 36385607 36385885 -67109089 + RMER5 LTR ERV1 70 399 -135 7 862 218 212 174 43 chr15 36386516 36386541 -67108433 - PB1D10 SINE Alu -2 115 38 7 862 228 159 45 0 chr15 36386541 36386585 -67108389 - ID_B1 SINE B4 -60 164 119 7 862 830 260 10 62 chr15 36386675 36386884 -67108090 - B3A SINE B2 0 198 1 7 862 263 305 0 0 chr15 36386905 36386964 -67108010 + ID_B1 SINE B4 76 134 -90 7 862 277 204 0 54 chr15 36386919 36386996 -67107978 + B1_Mur4 SINE Alu 10 76 -72 7 862 642 253 137 32 chr15 36387038 36387287 -67107687 + B4A SINE B4 1 275 -17 7 862 414 0 0 0 chr15 36387807 36387853 -67107121 + (GA)n Simple_repeat Simple_repeat 2 47 0 7 862 223 355 82 8 chr15 36388093 36388215 -67106759 + L2 LINE L2 2622 2752 -667 7 862 525 71 0 0 chr15 36388273 36388343 -67106631 + (TG)n Simple_repeat Simple_repeat 2 71 0 7 862 1253 234 173 22 chr15 36388345 36388703 -67106271 + RMER15 LTR ERVL 30 441 -134 7 862 413 254 15 99 chr15 36389237 36389265 -67105709 + RMER15 LTR ERVL 437 459 -116 7 862 1495 59 5 0 chr15 36389265 36389451 -67105523 + B2_Mm1a SINE B2 3 189 -4 7 862 413 254 15 99 chr15 36389451 36389553 -67105421 + RMER15 LTR ERVL 460 556 -19 7 862 378 0 0 0 chr15 36390563 36390605 -67104369 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 862 333 0 0 0 chr15 36390605 36390641 -67104333 + (GA)n Simple_repeat Simple_repeat 1 37 0 8 862 22 0 0 0 chr15 36391125 36391147 -67103827 + GC_rich Low_complexity Low_complexity 1 22 0 8 862 734 206 174 0 chr15 36391147 36391331 -67103643 + B3 SINE B2 1 216 0 8 862 30498 112 21 6 chr15 36391511 36397154 -67097820 + L1_Mus3 LINE L1 425 6163 -475 8 862 465 223 42 54 chr15 36397430 36397596 -67097378 + RNLTR23 LTR ERVK 479 642 0 8 862 943 241 0 28 chr15 36397833 36398051 -67096923 + RNERVK23-int LTR ERVK 217 428 -7789 8 862 3518 87 4 4 chr15 36398053 36398593 -67096381 + L1_Mus3 LINE L1 6164 6638 0 8 862 431 100 0 41 chr15 36398593 36398650 -67096324 + B1_Mm SINE Alu 78 134 -13 8 862 257 68 0 22 chr15 36398650 36398695 -67096279 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 8 862 431 100 0 41 chr15 36398695 36398710 -67096264 + B1_Mm SINE Alu 135 147 0 8 862 320 244 26 0 chr15 36399873 36399951 -67095023 + ID4_ SINE ID 3 82 -1 8 862 1359 203 130 19 chr15 36400366 36400743 -67094231 - MTC LTR MaLR 0 421 3 8 862 233 311 13 26 chr15 36401560 36401636 -67093338 - B4A SINE B4 -217 75 1 8 862 25 0 0 0 chr15 36401731 36401756 -67093218 + AT_rich Low_complexity Low_complexity 1 25 0 8 862 330 26 0 0 chr15 36402820 36402859 -67092115 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 862 336 271 14 0 chr15 36402860 36402930 -67092044 - RSINE1 SINE B4 -15 150 80 8 862 21 0 0 0 chr15 36402930 36402951 -67092023 + AT_rich Low_complexity Low_complexity 1 21 0 8 862 744 128 160 0 chr15 36402951 36403076 -67091898 - B1_Mm SINE Alu 0 147 3 8 862 289 347 10 20 chr15 36403328 36403428 -67091546 - PB1D10 SINE Alu -16 101 3 8 862 281 196 47 0 chr15 36403476 36403542 -67091432 - B1_Mur4 SINE Alu -2 118 45 8 862 353 200 14 0 chr15 36404640 36404710 -67090264 - B4A SINE B4 -218 74 4 8 862 566 227 207 34 chr15 36404879 36405116 -67089858 - MTD LTR MaLR -1 418 141 8 862 635 248 37 25 chr15 36405098 36405259 -67089715 + B3 SINE B2 45 207 -9 8 862 291 292 152 24 chr15 36405258 36405423 -67089551 - MER20B DNA MER1_type -500 283 98 8 862 438 20 0 0 chr15 36405698 36405749 -67089225 + (CA)n Simple_repeat Simple_repeat 1 51 0 8 862 554 273 309 23 chr15 36405930 36406198 -67088776 - ORR1D2 LTR MaLR -13 357 14 8 862 1198 198 14 0 chr15 36406465 36406677 -67088297 + ID_B1 SINE B4 2 216 -8 8 862 198 71 0 0 chr15 36407061 36407089 -67087885 + (TC)n Simple_repeat Simple_repeat 2 29 0 8 862 230 284 37 0 chr15 36409495 36409576 -67085398 + Lx8 LINE L1 7385 7468 -5 8 862 891 208 44 5 chr15 36409697 36409900 -67085074 + B3 SINE B2 1 211 -5 8 862 300 233 266 32 chr15 36410047 36410171 -67084803 - RSINE1 SINE B4 -6 159 7 8 862 474 210 60 0 chr15 36410234 36410334 -67084640 - B1F SINE Alu -15 134 29 8 862 342 0 0 0 chr15 36410340 36410378 -67084596 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 862 26 74 0 0 chr15 36410597 36410651 -67084323 + AT_rich Low_complexity Low_complexity 1 54 0 8 862 252 281 0 0 chr15 36410957 36411046 -67083928 + (TA)n Simple_repeat Simple_repeat 1 89 0 8 862 405 58 0 0 chr15 36411045 36411097 -67083877 + (GA)n Simple_repeat Simple_repeat 2 53 0 8 862 548 217 18 6 chr15 36411097 36411215 -67083759 - B1F SINE Alu -4 113 1 8 862 1219 194 10 0 chr15 36411282 36411488 -67083486 + B3 SINE B2 2 209 -7 8 862 561 108 13 0 chr15 36411701 36411794 -67083180 - PB1D9 SINE Alu -53 97 3 8 862 346 257 25 66 chr15 36411794 36411822 -67083152 - ID_B1 SINE B4 -50 174 59 8 862 614 264 261 4 chr15 36411875 36412283 -67082691 - L1MB7 LINE L1 -151 6033 5497 8 862 239 291 43 65 chr15 36412326 36412418 -67082556 + B3A SINE B2 1 90 -108 8 862 262 253 52 52 chr15 36412456 36412552 -67082422 + B4A SINE B4 195 290 -2 8 862 198 156 0 0 chr15 36412559 36412604 -67082370 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 862 325 270 32 51 chr15 36413225 36413365 -67081609 - PB1D7 SINE Alu 0 149 17 8 862 355 211 207 67 chr15 36414062 36414255 -67080719 + HAL1-3A_ME LINE L1 1799 2018 -840 8 862 279 173 0 0 chr15 36414258 36414310 -67080664 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 8 862 219 262 0 0 chr15 36414350 36414430 -67080544 + (TA)n Simple_repeat Simple_repeat 1 80 0 8 862 351 181 33 66 chr15 36414850 36415033 -67079941 + (CATA)n Simple_repeat Simple_repeat 2 178 0 8 862 810 121 13 6 chr15 36415210 36415368 -67079606 + (CA)n Simple_repeat Simple_repeat 1 159 0 8 862 774 244 0 41 chr15 36416899 36417070 -67077904 - RSINE1 SINE B4 0 165 2 8 862 231 239 137 27 chr15 36417917 36417990 -67076984 - ID4_ SINE ID -2 81 1 8 862 181 243 0 51 chr15 36419822 36419861 -67075113 + L3 LINE CR1 3364 3400 -1089 8 862 381 227 146 37 chr15 36421212 36421375 -67073599 - B3 SINE B2 -14 184 1 8 862 247 261 157 0 chr15 36422451 36422566 -67072408 - L1MC LINE L1 -2969 3177 3045 8 862 410 328 30 0 chr15 36423021 36423155 -67071819 + ORR1E LTR MaLR 1 138 -221 8 862 406 298 246 30 chr15 36423510 36423742 -67071232 + Tigger7 DNA MER2_type 11 292 -2199 8 862 1032 231 114 23 chr15 36423753 36424059 -67070915 + Tigger7 DNA MER2_type 2155 2488 -3 8 862 207 322 178 50 chr15 36424203 36424546 -67070428 + L2a LINE L2 2948 3334 -92 8 862 666 168 62 23 chr15 36424650 36424778 -67070196 - B1_Mur3 SINE Alu -11 138 6 8 862 283 284 0 21 chr15 36424984 36425069 -67069905 + ORR1E LTR MaLR 212 292 -87 8 862 382 234 104 62 chr15 36425651 36425791 -67069183 + MIR SINE MIR 52 194 -74 8 862 273 29 0 0 chr15 36426958 36426992 -67067982 + (TC)n Simple_repeat Simple_repeat 1 34 0 8 862 235 308 51 0 chr15 36427131 36427209 -67067765 - Arthur1 DNA Tip100 -432 3515 3434 8 862 997 253 56 33 chr15 36427210 36427480 -67067494 + B4 SINE B4 3 278 -14 8 862 615 291 151 0 chr15 36427607 36427858 -67067116 - Arthur1 DNA Tip100 -523 3424 3136 8 862 232 252 107 121 chr15 36427859 36427873 -67067101 - MURVY-LTR LTR ERV1 -224 295 274 8 862 269 173 0 103 chr15 36427873 36427931 -67067043 - Arthur1 DNA Tip100 -1352 2595 2544 8 862 232 252 107 121 chr15 36427931 36427999 -67066975 - MURVY-LTR LTR ERV1 -224 273 158 8 862 400 289 152 30 chr15 36428109 36428412 -67066562 - MLT1D LTR MaLR -109 396 57 8 862 1368 254 29 18 chr15 36428417 36428757 -67066217 + MTE2b LTR MaLR 36 379 0 8 862 227 220 20 0 chr15 36429149 36429199 -67065775 - MER5B DNA MER1_type -1 177 127 8 862 675 165 35 0 chr15 36429579 36429694 -67065280 + B1_Mur2 SINE Alu 15 133 -16 8 862 375 41 0 0 chr15 36430138 36430187 -67064787 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 862 351 284 51 17 chr15 36430414 36430532 -67064442 - MLT2E LTR ERVL -22 606 485 8 862 258 32 0 0 chr15 36431243 36431274 -67063700 + (A)n Simple_repeat Simple_repeat 1 31 0 8 862 516 307 45 19 chr15 36431285 36431441 -67063533 + MLT1A0 LTR MaLR 18 177 -188 8 862 310 160 0 138 chr15 36431506 36431593 -67063381 + MLT1A0 LTR MaLR 312 386 -22 8 862 611 245 7 0 chr15 36432379 36432518 -67062456 + B1_Mur1 SINE Alu 1 140 -9 8 862 313 75 19 19 chr15 36432522 36432576 -67062398 + (CAA)n Simple_repeat Simple_repeat 2 55 0 8 862 390 353 53 10 chr15 36432678 36432887 -67062087 - MER2 DNA MER2_type -34 311 94 8 862 593 191 45 0 chr15 36433448 36433558 -67061416 - PB1D10 SINE Alu -1 116 2 8 862 868 157 145 0 chr15 36434425 36434597 -67060377 - B3A SINE B2 0 198 2 8 862 284 271 50 50 chr15 36435792 36435893 -67059081 + MER5B DNA MER1_type 74 174 -4 8 862 413 229 0 24 chr15 36436213 36436298 -67058676 - RSINE1 SINE B4 -5 160 78 8 862 269 301 84 74 chr15 36436858 36437048 -67057926 + MIR SINE MIR 7 198 -64 8 863 225 94 0 0 chr15 36438141 36438173 -67056801 + (TAA)n Simple_repeat Simple_repeat 1 32 0 8 863 2228 181 33 7 chr15 36438273 36438696 -67056278 + BGLII_B LTR ERVK 1 434 -7 8 863 284 265 0 0 chr15 36440278 36440346 -67054628 + MYSERV6-int LTR ERVK 452 519 -8440 8 863 6852 210 118 97 chr15 36440345 36441359 -67053615 + MYSERV16_I-int LTR ERVK 5 875 -1451 8 863 1320 14 0 0 chr15 36441359 36441506 -67053468 + B1_Mus1 SINE Alu 2 148 0 8 863 6852 194 120 98 chr15 36441506 36442845 -67052129 + MYSERV16_I-int LTR ERVK 261 2246 -80 8 863 1942 186 37 28 chr15 36442876 36443276 -67051698 + BGLII_B LTR ERVK 1 403 -38 8 863 313 20 20 39 chr15 36443276 36443327 -67051647 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 8 863 1942 186 37 28 chr15 36443327 36443363 -67051611 + BGLII_B LTR ERVK 404 441 0 8 863 230 326 121 45 chr15 36443386 36443453 -67051521 - B3 SINE B2 0 216 151 8 863 192 111 0 0 chr15 36443453 36443489 -67051485 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 863 629 213 57 0 chr15 36443498 36443620 -67051354 - RSINE1 SINE B4 -33 132 4 8 863 250 349 47 0 chr15 36443637 36443766 -67051208 - B1F1 SINE Alu -13 136 2 8 863 362 239 199 60 chr15 36444167 36444318 -67050656 + MLT1J LTR MaLR 303 474 -38 8 863 944 213 191 16 chr15 36444333 36444650 -67050324 + MTD LTR MaLR 13 417 -2 8 863 261 0 0 0 chr15 36444868 36444897 -67050077 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 863 837 198 153 16 chr15 36444945 36445135 -67049839 + B3 SINE B2 1 216 0 8 863 457 257 28 28 chr15 36445220 36445328 -67049646 + PB1D10 SINE Alu 9 116 -1 8 863 198 67 43 22 chr15 36445369 36445415 -67049559 + (TTTTTG)n Simple_repeat Simple_repeat 1 47 0 8 863 760 265 49 2 chr15 36445429 36445640 -67049334 - B4A SINE B4 -4 288 69 8 863 939 228 24 15 chr15 36446812 36447017 -67047957 + B3 SINE B2 10 216 0 8 863 823 174 29 0 chr15 36447463 36447601 -67047373 + B1_Mur1 SINE Alu 2 143 -6 8 863 207 114 0 0 chr15 36447604 36447639 -67047335 + (CAAA)n Simple_repeat Simple_repeat 4 38 0 8 863 914 212 88 5 chr15 36447648 36447842 -67047132 + B3 SINE B2 7 216 0 9 863 496 83 41 10 chr15 36447897 36447994 -67046980 + (TCC)n Simple_repeat Simple_repeat 1 100 0 9 863 378 165 11 0 chr15 36448394 36448467 -67046507 - B1_Mus1 SINE Alu -10 110 34 9 863 289 209 104 0 chr15 36448417 36448484 -67046490 - MT2B LTR ERVL -361 240 167 9 863 7289 27 3 0 chr15 36448729 36449606 -67045368 - L1Md_A LINE L1 0 6582 5703 9 863 1601 261 112 66 chr15 36449916 36450526 -67044448 - RLTR26 LTR ERVK -4 638 1 9 863 2683 139 10 7 chr15 36451105 36451517 -67043457 + MTC LTR MaLR 6 418 -3 9 863 707 216 160 11 chr15 36451748 36451935 -67043039 - B3 SINE B2 -1 215 1 9 863 742 215 16 38 chr15 36451962 36452146 -67042828 + HAL1-2a_MD LINE L1 2326 2505 -519 9 863 849 114 0 0 chr15 36452158 36452272 -67042702 - B1_Mus2 SINE Alu 0 147 34 9 863 29 0 0 0 chr15 36452275 36452304 -67042670 + AT_rich Low_complexity Low_complexity 1 29 0 9 863 255 329 63 75 chr15 36452764 36452938 -67042036 + ORR1E LTR MaLR 116 287 -72 9 863 378 0 0 0 chr15 36453088 36453130 -67041844 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 863 252 0 0 0 chr15 36453421 36453449 -67041525 + (CACAG)n Simple_repeat Simple_repeat 3 30 0 9 863 244 313 0 0 chr15 36453553 36453636 -67041338 + L1M5 LINE L1 2715 2797 -3349 9 863 451 246 171 23 chr15 36454166 36454295 -67040679 + RSINE1 SINE B4 11 158 -7 9 863 609 14 0 0 chr15 36454295 36454365 -67040609 + (CATCT)n Simple_repeat Simple_repeat 1 70 0 9 863 533 179 0 8 chr15 36454365 36454489 -67040485 + (TCCA)n Simple_repeat Simple_repeat 3 125 0 9 863 187 268 143 0 chr15 36454811 36454867 -67040107 + L2c LINE L2 3313 3376 -11 9 863 181 216 0 26 chr15 36454835 36454873 -67040101 + MIRb SINE MIR 230 266 -2 9 863 405 0 0 0 chr15 36455100 36455145 -67039829 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 9 863 785 134 31 0 chr15 36455147 36455274 -67039700 - B1_Mur3 SINE Alu -10 139 9 9 863 722 282 27 16 chr15 36455870 36456054 -67038920 - B3 SINE B2 -22 194 9 9 863 291 200 57 0 chr15 36456089 36456159 -67038815 + ID4 SINE ID 2 75 -8 9 863 307 314 136 55 chr15 36456269 36456409 -67038565 + BLACKJACK DNA AcHobo 829 994 -1950 9 863 1058 163 16 16 chr15 36456409 36456602 -67038372 + B3A SINE B2 1 193 -5 9 863 307 314 136 55 chr15 36456602 36456660 -67038314 + BLACKJACK DNA AcHobo 995 1043 -1901 9 863 253 209 44 15 chr15 36456695 36456763 -67038211 + ID4_ SINE ID 3 72 -11 9 863 288 268 80 30 chr15 36456778 36456878 -67038096 - Cheshire DNA MER1_type -2142 278 174 9 863 348 83 0 0 chr15 36457211 36457259 -67037715 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 863 356 264 152 0 chr15 36457657 36457782 -67037192 - B1F1 SINE Alu -5 144 1 9 863 481 289 84 0 chr15 36457923 36458089 -67036885 + B3A SINE B2 1 180 -18 9 863 692 62 0 0 chr15 36458542 36458638 -67036336 - L1_Mus1 LINE L1 -247 6320 6225 9 863 1202 83 6 0 chr15 36458638 36458807 -67036167 + L1Md_F2 LINE L1 6413 6582 0 9 863 223 170 0 41 chr15 36458814 36458846 -67036128 + A-rich Low_complexity Low_complexity 1 31 0 9 863 1259 54 0 0 chr15 36458846 36458993 -67035981 + B1_Mus1 SINE Alu 2 148 0 9 863 223 170 0 41 chr15 36458993 36459009 -67035965 + A-rich Low_complexity Low_complexity 32 47 0 9 863 289 278 8 107 chr15 36459009 36459023 -67035951 + MT2B LTR ERVL 155 156 -445 9 863 752 240 0 0 chr15 36459023 36459169 -67035805 + B1_Mur1 SINE Alu 3 148 -1 9 863 23 54 0 0 chr15 36459203 36459240 -67035734 + AT_rich Low_complexity Low_complexity 1 37 0 9 863 616 333 41 48 chr15 36459268 36459561 -67035413 + MER2 DNA MER2_type 2 292 -53 9 863 846 232 41 5 chr15 36459914 36460109 -67034865 - B3 SINE B2 -11 205 4 9 863 234 315 22 0 chr15 36460111 36460200 -67034774 - L1MB3 LINE L1 -41 6142 6052 9 863 391 278 8 65 chr15 36460204 36460327 -67034647 + ID_B1 SINE B4 64 179 -45 9 863 498 274 4 52 chr15 36460235 36460382 -67034592 + PB1D10 SINE Alu 8 150 0 9 863 229 164 135 0 chr15 36460892 36460996 -67033978 + (ACCTG)n Simple_repeat Simple_repeat 3 120 0 9 863 195 67 43 43 chr15 36461010 36461057 -67033917 + (CCCTG)n Simple_repeat Simple_repeat 3 49 0 9 863 415 263 0 74 chr15 36461074 36461263 -67033711 + (CCTG)n Simple_repeat Simple_repeat 3 177 0 9 863 423 244 0 82 chr15 36461288 36461484 -67033490 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 9 863 312 82 70 44 chr15 36461519 36461633 -67033341 + (CCCTG)n Simple_repeat Simple_repeat 3 119 0 9 863 705 106 0 0 chr15 36463995 36464099 -67030875 + (CA)n Simple_repeat Simple_repeat 2 105 0 9 863 963 157 0 0 chr15 36464426 36464772 -67030202 + (CA)n Simple_repeat Simple_repeat 1 346 0 9 863 339 150 0 0 chr15 36466276 36466336 -67028638 + (TCC)n Simple_repeat Simple_repeat 3 62 0 9 863 492 122 0 0 chr15 36466328 36466410 -67028564 + (TC)n Simple_repeat Simple_repeat 2 83 0 9 863 378 0 0 0 chr15 36466498 36466540 -67028434 + (TG)n Simple_repeat Simple_repeat 1 42 0 9 863 360 0 0 0 chr15 36466540 36466579 -67028395 + (GA)n Simple_repeat Simple_repeat 1 40 0 9 863 715 218 6 58 chr15 36466944 36467100 -67027874 - B1_Mur2 SINE Alu -1 148 1 9 863 347 348 204 10 chr15 36467507 36467806 -67027168 + ORR1E LTR MaLR 3 359 0 9 863 207 139 0 0 chr15 36469546 36469582 -67025392 + (CACCT)n Simple_repeat Simple_repeat 3 38 0 9 863 665 213 71 0 chr15 36469583 36469710 -67025264 - B1_Mur2 SINE Alu -13 136 1 9 863 596 346 67 30 chr15 36469711 36470039 -67024935 - MER21B LTR ERV1 -112 751 412 9 863 260 307 25 58 chr15 36470129 36470250 -67024724 + MIR SINE MIR 66 182 -80 9 863 211 355 0 0 chr15 36470415 36470477 -67024497 + ID SINE ID 17 78 -146 9 863 212 244 22 0 chr15 36471644 36471689 -67023285 + L2c LINE L2 3111 3156 -231 9 863 1927 75 131 3 chr15 36471692 36471975 -67022999 + ORR1A2 LTR MaLR 1 319 -8 9 863 185 303 78 70 chr15 36472201 36472343 -67022631 + L2c LINE L2 3277 3419 -7 9 863 338 219 96 0 chr15 36472455 36472528 -67022446 + BC1_Mm scRNA scRNA 1 80 -72 9 863 1467 73 5 0 chr15 36472625 36472817 -67022157 + B2_Mm1a SINE B2 1 193 0 9 863 285 272 25 0 chr15 36473141 36473222 -67021752 - MIRb SINE MIR -76 192 110 9 863 223 265 88 0 chr15 36473223 36473291 -67021683 + ID_B1 SINE B4 80 153 -71 9 863 308 260 9 46 chr15 36473311 36473420 -67021554 + G-rich Low_complexity Low_complexity 5 109 0 9 863 444 232 277 32 chr15 36474425 36474686 -67020288 + MTEa LTR MaLR 32 379 0 9 863 3887 141 113 12 chr15 36475688 36476379 -67018595 + RMER19B LTR ERVK 138 898 -4 9 863 309 253 12 24 chr15 36476392 36476477 -67018497 + L1MB7 LINE L1 6012 6095 -89 9 863 511 227 83 0 chr15 36476947 36477079 -67017895 - B1_Mur2 SINE Alu -6 143 1 9 863 23 0 0 0 chr15 36477248 36477271 -67017703 + AT_rich Low_complexity Low_complexity 1 23 0 9 863 701 330 26 7 chr15 36477496 36477768 -67017206 + L2 LINE L2 2625 2901 -518 9 863 497 244 52 58 chr15 36477841 36478015 -67016959 - MER3 DNA MER1_type -30 179 7 9 863 1167 88 0 0 chr15 36478215 36478362 -67016612 + B1_Mus2 SINE Alu 1 147 0 9 863 264 59 0 0 chr15 36478362 36478396 -67016578 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 9 863 386 254 9 0 chr15 36478396 36478506 -67016468 + L1MC3 LINE L1 5572 5682 -2103 9 863 796 202 11 34 chr15 36478514 36478693 -67016281 + B3A SINE B2 16 190 -8 9 863 1717 21 0 0 chr15 36478715 36478906 -67016068 + B2_Mm1t SINE B2 2 192 -1 9 863 984 124 13 27 chr15 36478934 36479083 -67015891 + B1_Mus1 SINE Alu 1 147 -1 9 863 1326 277 122 54 chr15 36479086 36479902 -67015072 + L1MC3 LINE L1 5716 6587 -1198 9 863 518 303 99 41 chr15 36479908 36480210 -67014764 + MTEb LTR MaLR 10 376 -3 9 863 1322 289 145 33 chr15 36480271 36481209 -67013765 + L1MC3 LINE L1 6647 7689 -96 9 863 930 241 33 33 chr15 36481214 36481428 -67013546 + B3 SINE B2 3 216 0 9 863 323 211 112 31 chr15 36481444 36481542 -67013432 + L1MC3 LINE L1 7678 7783 -2 9 863 212 304 140 11 chr15 36482441 36482457 -67012517 - B1_Mus1 SINE Alu -19 129 96 9 863 309 170 0 0 chr15 36482457 36482504 -67012470 - ID_B1 SINE B4 -32 192 146 9 863 212 304 140 11 chr15 36482504 36482534 -67012440 - B1_Mus1 SINE Alu -19 95 25 9 863 364 217 0 42 chr15 36482522 36482594 -67012380 - ID SINE ID -153 71 3 9 863 537 55 0 0 chr15 36482596 36482669 -67012305 + (TG)n Simple_repeat Simple_repeat 1 73 0 9 863 270 0 0 0 chr15 36482700 36482730 -67012244 + (GA)n Simple_repeat Simple_repeat 1 30 0 9 863 209 109 22 0 chr15 36482744 36482790 -67012184 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 863 191 36 36 0 chr15 36482845 36482873 -67012101 + (TTC)n Simple_repeat Simple_repeat 2 30 0 9 863 737 153 56 35 chr15 36482877 36483019 -67011955 - B1_Mus1 SINE Alu 0 148 4 9 863 714 24 0 0 chr15 36483019 36483103 -67011871 + (TCTCCC)n Simple_repeat Simple_repeat 6 89 0 9 863 567 228 105 8 chr15 36483170 36483294 -67011680 - RSINE1 SINE B4 -28 137 2 9 863 451 177 57 74 chr15 36483480 36483602 -67011372 + PB1D9 SINE Alu 1 120 0 9 863 232 362 110 40 chr15 36483674 36483901 -67011073 + LTR86C LTR ERVL 304 546 -75 9 863 1610 36 5 0 chr15 36484126 36484318 -67010656 - B2_Mm1t SINE B2 0 193 1 9 863 419 243 53 26 chr15 36484327 36484441 -67010533 - PB1D10 SINE Alu 0 117 1 9 863 207 0 0 0 chr15 36484939 36484962 -67010012 + (CCA)n Simple_repeat Simple_repeat 3 25 0 9 863 276 100 0 0 chr15 36485384 36485424 -67009550 + (CCCCG)n Simple_repeat Simple_repeat 5 44 0 9 863 388 216 0 0 chr15 36486369 36486443 -67008531 + MTEa LTR MaLR 5 78 -301 9 863 966 221 34 14 chr15 36486643 36486850 -67008124 + B3 SINE B2 5 215 -1 9 863 22 0 0 0 chr15 36486850 36486872 -67008102 + AT_rich Low_complexity Low_complexity 1 22 0 9 863 379 169 99 0 chr15 36486963 36487034 -67007940 - RSINE1 SINE B4 -35 130 53 1 863 274 252 114 57 chr15 36487037 36487220 -67007754 - L1ME2z LINE L1 -436 6008 5813 1 863 270 0 0 0 chr15 36487220 36487250 -67007724 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1 863 274 252 114 57 chr15 36487250 36487276 -67007698 - L1ME2z LINE L1 -632 5812 5787 1 863 282 250 35 90 chr15 36487258 36487403 -67007571 - L1ME2z LINE L1 -317 5847 5711 1 863 1109 287 110 12 chr15 36487653 36487998 -67006976 + MTE2a LTR MaLR 1 379 0 1 863 250 229 0 0 chr15 36488029 36488077 -67006897 - Tigger5 DNA MER2_type -2322 84 37 1 863 216 149 0 0 chr15 36488357 36488404 -67006570 + (TCTCTG)n Simple_repeat Simple_repeat 1 47 0 1 863 24 0 0 0 chr15 36488489 36488513 -67006461 + AT_rich Low_complexity Low_complexity 1 24 0 1 863 404 226 98 0 chr15 36489342 36489444 -67005530 + PB1D10 SINE Alu 6 117 0 1 863 582 126 0 31 chr15 36489470 36489568 -67005406 + ORR1B1 LTR MaLR 1 95 -234 1 863 1708 224 67 59 chr15 36489575 36490098 -67004876 - RLTR11A LTR ERVK -1 527 1 1 863 1434 134 26 13 chr15 36490099 36490333 -67004641 + ORR1B1 LTR MaLR 158 394 0 1 863 415 278 10 0 chr15 36490354 36490451 -67004523 + ID_B1 SINE B4 124 221 -3 1 863 877 223 155 0 chr15 36490458 36490805 -67004169 + RCHARR1 DNA MER1_type 520 945 -29 1 863 1230 54 0 0 chr15 36491638 36491785 -67003189 - B1_Mus1 SINE Alu 0 148 2 1 863 273 174 34 23 chr15 36492083 36492171 -67002803 + GA-rich Low_complexity Low_complexity 3 91 0 1 863 269 357 14 7 chr15 36492247 36492391 -67002583 + (CA)n Simple_repeat Simple_repeat 2 146 0 1 863 258 287 72 59 chr15 36492413 36492565 -67002409 - RLTR22_Mur LTR ERVK -398 1450 1297 1 863 360 0 0 0 chr15 36492971 36493011 -67001963 + (CTG)n Simple_repeat Simple_repeat 2 41 0 1 863 489 163 0 0 chr15 36493009 36493101 -67001873 + CT-rich Low_complexity Low_complexity 3 94 0 1 863 576 0 0 0 chr15 36493696 36493760 -67001214 + (GA)n Simple_repeat Simple_repeat 1 64 0 1 863 285 241 35 0 chr15 36493761 36493819 -67001155 - B1F SINE Alu -23 126 67 1 863 856 268 54 92 chr15 36493891 36494315 -67000659 + MYSERV6-int LTR ERVK 8283 8690 -269 1 863 1001 295 61 42 chr15 36494499 36494924 -67000050 + BGLII_B LTR ERVK 1 433 -8 1 863 1189 89 48 53 chr15 36495208 36495397 -66999577 - B2_Mm2 SINE B2 -6 189 2 1 863 1972 109 37 46 chr15 36495435 36495762 -66999212 + ORR1A4 LTR MaLR 6 329 0 1 863 937 196 105 119 chr15 36495768 36496353 -66998621 + RLTR19-int LTR ERVK 3529 3962 -2175 1 863 849 48 0 0 chr15 36496353 36496457 -66998517 - B1_Mm SINE Alu -8 139 36 1 863 362 248 71 35 chr15 36496736 36496849 -66998125 + B4A SINE B4 78 194 -98 1 863 914 55 0 0 chr15 36496763 36496873 -66998101 + B1_Mm SINE Alu 18 127 -20 1 863 561 250 90 42 chr15 36496889 36497056 -66997918 + B3 SINE B2 42 216 0 1 863 24 67 0 0 chr15 36497165 36497210 -66997764 + AT_rich Low_complexity Low_complexity 1 45 0 1 863 1184 80 6 0 chr15 36497285 36497460 -66997514 + L1_Mm LINE L1 5244 5419 -464 1 863 317 286 13 25 chr15 36497475 36497544 -66997430 - L1MEg LINE L1 -4132 1952 1883 1 863 1220 54 0 13 chr15 36497544 36497694 -66997280 - B1_Mus1 SINE Alu 0 148 1 1 863 1495 189 100 52 chr15 36498214 36498544 -66996430 + ORR1B1 LTR MaLR 41 386 -8 1 863 2195 133 8 10 chr15 36499317 36499685 -66995289 - ORR1A3 LTR MaLR -8 386 2 1 863 1471 139 168 14 chr15 36499709 36500000 -66994974 - ORR1A3-int LTR MaLR -107 1402 1067 1 863 3510 106 27 2 chr15 36500001 36500549 -66994425 - ORR1A3-int LTR MaLR -363 1600 1039 1 863 513 0 0 0 chr15 36500549 36500606 -66994368 + (TC)n Simple_repeat Simple_repeat 1 57 0 2 863 2590 212 64 72 chr15 36500606 36500979 -66993995 - ORR1A4-int LTR MaLR -869 389 252 3 863 1608 146 13 61 chr15 36500979 36501292 -66993682 - ORR1A4 LTR MaLR -31 298 1 3 863 240 35 0 0 chr15 36501644 36501673 -66993301 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 863 212 234 0 0 chr15 36502133 36502180 -66992794 + GA-rich Low_complexity Low_complexity 4 50 0 5 863 198 0 0 0 chr15 36502213 36502235 -66992739 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 6 863 772 242 22 0 chr15 36502243 36502425 -66992549 - B3 SINE B2 -30 186 1 7 863 1599 204 53 61 chr15 36502908 36503320 -66991654 + RLTR20A LTR ERVK 1 409 -132 8 863 615 27 0 0 chr15 36503322 36503395 -66991579 + (CGTG)n Simple_repeat Simple_repeat 1 73 0 9 863 1257 205 65 45 chr15 36503416 36503768 -66991206 + RMER17B LTR ERVK 599 957 -1 1 863 891 259 19 0 chr15 36503968 36504173 -66990801 - ID_B1 SINE B4 -4 220 12 1 863 294 325 0 0 chr15 36504598 36504678 -66990296 - ID4_ SINE ID 0 83 4 1 863 235 221 19 37 chr15 36504723 36504831 -66990143 + (TG)n Simple_repeat Simple_repeat 2 107 0 1 863 361 217 36 24 chr15 36504892 36505057 -66989917 + (TG)n Simple_repeat Simple_repeat 2 168 0 1 863 216 239 27 27 chr15 36505078 36505190 -66989784 + (TG)n Simple_repeat Simple_repeat 1 112 0 1 863 352 202 47 12 chr15 36505951 36506036 -66988938 + RSINE1 SINE B4 2 89 -203 1 863 515 262 16 8 chr15 36506470 36506597 -66988377 - RSINE1 SINE B4 -36 129 2 1 863 751 255 93 22 chr15 36506902 36507171 -66987803 + B4A SINE B4 5 292 0 1 863 212 200 17 0 chr15 36507231 36507291 -66987683 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 863 381 309 15 38 chr15 36507334 36507465 -66987509 + RSINE1 SINE B4 3 130 -35 1 863 425 288 109 83 chr15 36507511 36507915 -66987059 + L1MB8 LINE L1 5693 6120 -58 1 863 1366 91 11 16 chr15 36507915 36508104 -66986870 - B2_Mm2 SINE B2 -7 188 1 2 863 425 288 109 83 chr15 36508104 36508168 -66986806 + L1MB8 LINE L1 6121 6173 -5 1 863 255 206 175 0 chr15 36508841 36508904 -66986070 - ID2 SINE ID 0 83 10 2 863 191 189 19 0 chr15 36508911 36508964 -66986010 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 863 622 247 220 18 chr15 36508964 36509187 -66985787 - B4A SINE B4 0 292 25 2 863 258 216 22 22 chr15 36509194 36509284 -66985690 + (TCTA)n Simple_repeat Simple_repeat 4 93 0 2 863 245 300 27 18 chr15 36509299 36509411 -66985563 - PB1D10 SINE Alu 0 117 5 2 863 246 236 31 73 chr15 36511327 36511423 -66983551 + MT2B2 LTR ERVL 150 241 -343 2 863 469 237 97 0 chr15 36511356 36511470 -66983504 + B1F SINE Alu 16 140 -9 2 863 506 263 14 82 chr15 36512790 36512997 -66981977 + B3A SINE B2 2 194 -4 2 863 634 138 234 29 chr15 36513014 36513185 -66981789 + B3 SINE B2 2 207 -9 2 863 222 37 0 0 chr15 36513257 36513284 -66981690 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 3 863 1253 28 0 0 chr15 36513285 36513427 -66981547 - B1_Mus1 SINE Alu -6 142 1 3 863 235 258 0 0 chr15 36513689 36513755 -66981219 + L1M5 LINE L1 5127 5192 -954 3 863 1359 307 101 78 chr15 36513755 36514205 -66980769 - RCHARR1 DNA MER1_type 0 974 486 3 863 225 0 0 0 chr15 36514205 36514230 -66980744 + (TGG)n Simple_repeat Simple_repeat 1 25 0 3 863 405 0 0 0 chr15 36514237 36514282 -66980692 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 3 863 841 125 7 49 chr15 36514282 36514425 -66980549 - B1_Mur4 SINE Alu -13 137 1 3 863 1359 307 101 78 chr15 36514425 36514454 -66980520 - RCHARR1 DNA MER1_type -489 485 470 3 863 770 188 14 0 chr15 36514454 36514592 -66980382 + B1_Mur2 SINE Alu 1 140 -9 3 863 1359 307 101 78 chr15 36514592 36515049 -66979925 - RCHARR1 DNA MER1_type -505 469 7 3 863 654 189 61 0 chr15 36515242 36515374 -66979600 - B1_Mur4 SINE Alu -9 141 2 3 863 225 304 12 12 chr15 36515404 36515484 -66979490 + ID4 SINE ID 4 83 0 3 863 5440 102 3 11 chr15 36515486 36516248 -66978726 + Lx2 LINE L1 6028 6783 -214 4 863 263 220 0 0 chr15 36516590 36516640 -66978334 + ID_B1 SINE B4 156 205 -19 4 863 248 360 70 0 chr15 36516681 36516767 -66978207 + PB1D10 SINE Alu 1 92 -28 4 863 891 64 8 0 chr15 36516766 36516891 -66978083 + B1_Mus1 SINE Alu 22 147 -1 4 863 841 152 262 6 chr15 36517009 36517181 -66977793 + B3 SINE B2 1 216 0 4 863 771 121 15 15 chr15 36517222 36517356 -66977618 + B2_Mm2 SINE B2 2 135 -60 4 863 1811 127 45 13 chr15 36517896 36518207 -66976767 + ORR1A4 LTR MaLR 1 321 -8 4 863 975 196 51 47 chr15 36518212 36518426 -66976548 - URR1A DNA MER1_type -10 216 2 4 863 435 256 118 22 chr15 36518490 36518626 -66976348 + RSINE1 SINE B4 3 151 -14 4 863 493 153 0 45 chr15 36518897 36518986 -66975988 + B2_Mm2 SINE B2 3 87 -108 4 863 220 322 0 79 chr15 36518986 36518998 -66975976 + RSINE1 SINE B4 4 96 -69 5 863 700 204 118 15 chr15 36519338 36519542 -66975432 - URR1B DNA MER1_type 0 225 1 5 863 507 173 96 43 chr15 36519542 36519657 -66975317 + B1F SINE Alu 23 143 -6 5 863 189 107 0 0 chr15 36520677 36520705 -66974269 + (CAGA)n Simple_repeat Simple_repeat 4 31 0 5 863 687 216 109 16 chr15 36521129 36521322 -66973652 + B3 SINE B2 2 212 -4 5 863 405 238 165 59 chr15 36522847 36523017 -66971957 + B3 SINE B2 1 188 -28 5 863 430 46 46 0 chr15 36523096 36523161 -66971813 + B2_Mm2 SINE B2 89 156 -39 5 863 2951 57 8 0 chr15 36523252 36523622 -66971352 + L1Md_F2 LINE L1 6198 6570 -12 5 863 589 106 152 9 chr15 36523638 36523743 -66971231 + PB1D9 SINE Alu 1 120 0 5 863 216 298 226 0 chr15 36524493 36524577 -66970397 + B1F2 SINE Alu 10 112 -37 5 863 944 75 82 0 chr15 36524596 36524730 -66970244 - B1_Mus2 SINE Alu -2 145 1 6 863 338 227 57 0 chr15 36524739 36524827 -66970147 + PB1D9 SINE Alu 22 114 -6 6 863 243 0 0 0 chr15 36525053 36525080 -66969894 + (A)n Simple_repeat Simple_repeat 1 27 0 6 863 22 80 0 0 chr15 36525602 36525652 -66969322 + AT_rich Low_complexity Low_complexity 1 50 0 6 863 27 73 0 0 chr15 36525738 36525793 -66969181 + AT_rich Low_complexity Low_complexity 1 55 0 6 863 22 0 0 0 chr15 36528202 36528224 -66966750 + AT_rich Low_complexity Low_complexity 1 22 0 6 863 264 262 72 43 chr15 36528400 36528515 -66966459 + B1F SINE Alu 1 116 -1 6 863 234 228 17 34 chr15 36528588 36528647 -66966327 - tRNA-Ala-GCA tRNA tRNA -13 62 5 6 863 541 201 182 8 chr15 36531592 36531781 -66963193 + ORR1D1 LTR MaLR 125 359 -11 6 863 38 0 0 0 chr15 36531822 36531860 -66963114 + AT_rich Low_complexity Low_complexity 1 38 0 6 863 214 227 112 62 chr15 36531860 36531940 -66963034 + B1_Mur1 SINE Alu 26 109 -40 7 863 221 253 124 21 chr15 36532110 36532207 -66962767 + PB1D9 SINE Alu 1 107 -13 7 863 22 35 0 0 chr15 36532817 36532846 -66962128 + AT_rich Low_complexity Low_complexity 1 29 0 7 863 978 59 82 0 chr15 36533352 36533487 -66961487 - B1_Mm SINE Alu 0 147 2 7 863 491 180 88 18 chr15 36533993 36534106 -66960868 + B1_Mus2 SINE Alu 11 131 -16 7 863 842 93 35 14 chr15 36534356 36534497 -66960477 + B1_Mur4 SINE Alu 7 150 0 7 863 249 243 93 0 chr15 36534850 36534934 -66960040 - B1F2 SINE Alu -5 112 13 7 863 616 156 61 82 chr15 36534945 36535092 -66959882 - B1_Mur2 SINE Alu -5 144 1 7 863 259 146 42 0 chr15 36535981 36536029 -66958945 - B1F SINE Alu -5 144 95 7 863 360 179 47 12 chr15 36536209 36536294 -66958680 - B1_Mur2 SINE Alu 0 149 62 7 863 293 211 31 21 chr15 36537982 36538079 -66956895 + (CCCG)n Simple_repeat Simple_repeat 4 101 0 8 863 215 246 0 44 chr15 36538308 36538376 -66956598 + G-rich Low_complexity Low_complexity 2 66 0 8 863 21 0 0 0 chr15 36538494 36538515 -66956459 + GC_rich Low_complexity Low_complexity 1 21 0 8 863 301 235 105 29 chr15 36539690 36539795 -66955179 + B1_Mus2 SINE Alu 3 115 -32 8 863 246 32 0 0 chr15 36540197 36540228 -66954746 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 863 1022 73 22 0 chr15 36540228 36540365 -66954609 - B1_Mus1 SINE Alu -8 140 1 8 863 373 230 79 10 chr15 36540829 36540930 -66954044 + RSINE1 SINE B4 14 121 -44 8 863 637 238 71 6 chr15 36541081 36541250 -66953724 - B3A SINE B2 -15 183 4 8 863 695 197 36 0 chr15 36541580 36541717 -66953257 - B1_Mur3 SINE Alu -7 142 1 8 863 333 0 0 0 chr15 36542115 36542152 -66952822 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 863 370 178 211 29 chr15 36542152 36542256 -66952718 - RSINE1 SINE B4 -41 124 2 9 863 877 166 0 14 chr15 36542930 36543077 -66951897 - B1_Mus1 SINE Alu -1 147 3 9 863 459 0 0 0 chr15 36543297 36543348 -66951626 + (TC)n Simple_repeat Simple_repeat 1 51 0 9 863 424 282 2 5 chr15 36545671 36545781 -66949193 - PB1D7 SINE Alu 0 120 10 9 863 269 333 20 40 chr15 36545700 36545800 -66949174 - ID_B1 SINE B4 -55 169 72 9 863 349 311 81 16 chr15 36546273 36546302 -66948672 - B4 SINE B4 0 292 265 9 863 653 118 0 9 chr15 36546302 36546413 -66948561 + (TG)n Simple_repeat Simple_repeat 2 111 0 9 863 349 311 81 16 chr15 36546413 36546507 -66948467 - B4 SINE B4 -28 264 161 9 863 271 103 0 0 chr15 36546587 36546626 -66948348 - PB1D7 SINE Alu -5 115 77 9 863 215 293 0 0 chr15 36546635 36546710 -66948264 + (TA)n Simple_repeat Simple_repeat 2 76 0 9 863 393 39 0 0 chr15 36546710 36546761 -66948213 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 863 357 260 0 13 chr15 36546763 36546841 -66948133 - PB1D7 SINE Alu -34 86 10 1 863 730 264 52 13 chr15 36547191 36547421 -66947553 - RMER5 LTR ERV1 -16 518 280 1 863 561 302 106 16 chr15 36547547 36547803 -66947171 - RMER5 LTR ERV1 -243 291 13 1 863 315 85 0 0 chr15 36547846 36547893 -66947081 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 863 215 143 24 0 chr15 36548095 36548137 -66946837 + (CACCC)n Simple_repeat Simple_repeat 4 46 0 1 863 1172 58 0 0 chr15 36548293 36548431 -66946543 + B1_Mm SINE Alu 1 138 -9 1 863 26 74 0 0 chr15 36548604 36548658 -66946316 + AT_rich Low_complexity Low_complexity 1 54 0 1 863 647 210 43 0 chr15 36548719 36548820 -66946154 - B1F2 SINE Alu -1 148 45 1 863 978 139 222 201 chr15 36548820 36548979 -66945995 - ORR1C2 LTR MaLR -4 380 192 1 863 180 0 0 0 chr15 36548979 36548999 -66945975 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 863 978 139 222 201 chr15 36548999 36549208 -66945766 - ORR1C2 LTR MaLR -193 191 4 1 863 647 210 43 0 chr15 36549208 36549244 -66945730 - B1F2 SINE Alu -105 44 6 1 863 188 0 74 0 chr15 36549314 36549341 -66945633 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1 863 1221 92 35 0 chr15 36549673 36549846 -66945128 + B2_Mm1t SINE B2 2 180 -13 1 863 369 88 27 20 chr15 36549877 36549987 -66944987 + B2_Mm2 SINE B2 47 193 -2 1 863 230 286 88 9 chr15 36550189 36550302 -66944672 + L1MC4 LINE L1 6795 6916 -1126 1 863 1251 34 0 0 chr15 36550365 36550511 -66944463 + B1_Mus2 SINE Alu 2 147 0 1 863 264 122 0 0 chr15 36550511 36550552 -66944422 + (A)n Simple_repeat Simple_repeat 1 41 0 1 863 289 308 53 47 chr15 36550909 36551059 -66943915 + MER3 DNA MER1_type 5 155 -54 1 863 345 245 81 45 chr15 36551070 36551181 -66943793 + PB1D10 SINE Alu 1 115 -2 1 863 406 296 113 0 chr15 36551194 36551309 -66943665 + RSINE1 SINE B4 3 130 -35 1 863 760 119 16 28 chr15 36551778 36551960 -66943014 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 863 562 228 156 15 chr15 36551980 36552185 -66942789 - B4A SINE B4 0 292 59 1 863 191 36 36 0 chr15 36552386 36552414 -66942560 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 863 738 215 320 0 chr15 36552414 36552810 -66942164 - Lx9 LINE L1 -63 7581 7059 1 863 607 153 72 0 chr15 36553260 36553371 -66941603 + RSINE1 SINE B4 14 132 -33 1 863 1410 70 16 26 chr15 36553425 36553615 -66941359 + B2_Mm2 SINE B2 3 190 -5 1 863 347 271 73 0 chr15 36554164 36554260 -66940714 + ID_B1 SINE B4 88 190 -34 1 863 645 178 13 6 chr15 36554297 36554455 -66940519 + GA-rich Low_complexity Low_complexity 1 159 0 1 863 366 208 29 59 chr15 36554512 36554614 -66940360 - MIRc SINE MIR -11 257 159 1 863 815 267 83 51 chr15 36554977 36555253 -66939721 + B4A SINE B4 2 286 -6 1 863 3665 42 58 0 chr15 36555885 36556334 -66938640 + MT2C_Mm LTR ERVL 1 475 0 1 863 311 311 8 8 chr15 36556615 36556735 -66938239 + PB1D7 SINE Alu 1 120 0 1 863 421 244 225 40 chr15 36556744 36556890 -66938084 + B4A SINE B4 1 181 -111 1 863 3059 45 49 10 chr15 36556890 36557275 -66937699 - MTB LTR MaLR 0 400 1 1 863 421 244 225 40 chr15 36557275 36557350 -66937624 + B4A SINE B4 182 263 -29 1 863 267 271 10 20 chr15 36557384 36557482 -66937492 + (CA)n Simple_repeat Simple_repeat 1 97 0 1 863 875 163 7 0 chr15 36557771 36557912 -66937062 - B1_Mus2 SINE Alu -1 146 5 1 863 40 21 0 0 chr15 36557927 36557974 -66937000 + AT_rich Low_complexity Low_complexity 1 47 0 1 863 384 361 15 0 chr15 36557995 36558125 -66936849 + ID_B1 SINE B4 93 224 0 1 863 233 207 0 35 chr15 36558793 36558878 -66936096 + T-rich Low_complexity Low_complexity 1 82 0 1 863 882 121 63 14 chr15 36558879 36559021 -66935953 - B1_Mur3 SINE Alu 0 149 1 1 863 410 220 36 151 chr15 36559101 36559267 -66935707 + RSINE1 SINE B4 3 149 -16 1 863 229 200 35 52 chr15 36559575 36559633 -66935341 - Tigger12 DNA MER2_type -1096 863 807 1 863 386 252 113 0 chr15 36560313 36560428 -66934546 + B1F SINE Alu 11 138 -11 1 863 396 355 72 45 chr15 36560871 36561092 -66933882 + MamRep605 Unknown Unknown 522 748 -128 1 863 272 307 34 11 chr15 36561180 36561269 -66933705 - L2c LINE L2 -205 3182 3092 1 863 207 0 0 0 chr15 36562632 36562655 -66932319 + (TGG)n Simple_repeat Simple_repeat 3 25 0 1 863 214 170 149 0 chr15 36563445 36563492 -66931482 - ID4_ SINE ID -16 67 14 1 863 401 153 57 0 chr15 36563661 36563785 -66931189 + GA-rich Low_complexity Low_complexity 1 131 0 1 863 22 0 0 0 chr15 36564401 36564423 -66930551 + AT_rich Low_complexity Low_complexity 1 22 0 1 863 669 55 164 0 chr15 36564423 36564551 -66930423 - RMER17B LTR ERVK -498 460 312 1 863 1258 228 178 17 chr15 36564844 36565255 -66929719 + MER31A LTR ERV1 9 485 0 1 863 904 276 115 0 chr15 36566404 36566690 -66928284 + MER2 DNA MER2_type 7 325 -20 1 863 1490 52 15 20 chr15 36567078 36567274 -66927700 + B2_Mm2 SINE B2 1 195 0 1 863 638 279 0 65 chr15 36567284 36567453 -66927521 + RSINE1 SINE B4 7 164 -1 1 863 597 92 47 35 chr15 36567457 36567626 -66927348 + (CAGA)n Simple_repeat Simple_repeat 4 174 0 1 863 378 100 0 0 chr15 36567824 36567884 -66927090 + (TTTC)n Simple_repeat Simple_repeat 2 61 0 1 863 1149 61 0 33 chr15 36567893 36568045 -66926929 - B1_Mus2 SINE Alu 0 147 1 1 863 748 109 38 23 chr15 36568045 36568167 -66926807 - B2_Mm2 SINE B2 -9 186 62 1 863 243 88 0 0 chr15 36568167 36568201 -66926773 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 1 863 282 321 45 9 chr15 36568416 36568526 -66926448 + PB1 SINE Alu 2 115 -12 1 863 565 137 31 31 chr15 36568558 36568656 -66926318 + B1_Mur2 SINE Alu 47 144 -5 1 864 493 282 0 0 chr15 36569578 36569695 -66925279 + MER5A1 DNA MER1_type 15 131 -35 1 864 198 307 202 0 chr15 36569742 36569856 -66925118 - MIRm SINE MIR -138 138 2 1 864 455 295 71 7 chr15 36570238 36570378 -66924596 + B1F SINE Alu 1 149 0 1 864 529 267 76 0 chr15 36570399 36570530 -66924444 + B1F2 SINE Alu 1 141 -8 1 864 413 265 32 64 chr15 36571163 36571288 -66923686 + MER5A DNA MER1_type 20 140 -49 1 864 321 296 52 61 chr15 36571305 36571420 -66923554 - PB1D9 SINE Alu -27 122 9 1 864 359 336 79 63 chr15 36571513 36571767 -66923207 - MLT1J LTR MaLR -252 260 3 1 864 325 278 0 48 chr15 36571819 36572008 -66922966 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 1 864 381 239 122 61 chr15 36572416 36572514 -66922460 + B1F2 SINE Alu 1 104 -45 1 864 1347 74 0 0 chr15 36573073 36573409 -66921565 + (TCC)n Simple_repeat Simple_repeat 1 336 0 1 864 204 275 31 71 chr15 36574696 36574794 -66920180 + MER91A DNA Tip100 3 96 -100 1 864 264 309 63 63 chr15 36575561 36575720 -66919254 + RMER15 LTR ERVL 14 172 -403 1 864 526 300 139 21 chr15 36575763 36575957 -66919017 + RMER15 LTR ERVL 345 561 -14 1 864 1136 88 0 0 chr15 36576089 36576236 -66918738 - B1_Mus1 SINE Alu -1 147 1 1 864 3248 40 27 2 chr15 36576425 36576826 -66918148 + IAPLTR2a LTR ERVK 1 411 0 1 864 1309 45 0 0 chr15 36576898 36577055 -66917919 + B2_Mm2 SINE B2 1 157 -38 1 864 198 0 0 0 chr15 36577055 36577077 -66917897 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 1 864 305 277 116 11 chr15 36577282 36577377 -66917597 - PB1 SINE Alu -2 125 21 1 864 1251 48 0 0 chr15 36577602 36577748 -66917226 + B1_Mus2 SINE Alu 2 147 0 1 864 899 130 0 13 chr15 36578118 36578274 -66916700 + (GAAA)n Simple_repeat Simple_repeat 2 155 0 1 864 268 111 0 0 chr15 36578274 36578310 -66916664 + (GGA)n Simple_repeat Simple_repeat 2 37 0 1 864 406 291 19 45 chr15 36578701 36578856 -66916118 - RSINE1 SINE B4 0 165 15 1 864 195 42 0 0 chr15 36578886 36578910 -66916064 + (TGGGGG)n Simple_repeat Simple_repeat 1 24 0 1 864 672 148 26 0 chr15 36579044 36579159 -66915815 - B1_Mur4 SINE Alu -32 118 1 1 864 351 192 8 175 chr15 36579159 36579186 -66915788 - MT2B2 LTR ERVL -430 154 149 1 864 472 218 23 31 chr15 36579159 36579172 -66915802 - ID_B1 SINE B4 -29 195 69 1 864 222 37 0 0 chr15 36579253 36579280 -66915694 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 864 665 281 62 13 chr15 36579322 36579546 -66915428 - L1MD3 LINE L1 -30 7965 7731 1 864 209 298 180 39 chr15 36579777 36580133 -66914841 + L2 LINE L2 2231 2636 -783 1 864 280 191 10 160 chr15 36580133 36580233 -66914741 + MT2B LTR ERVL 155 239 -362 1 864 484 196 10 61 chr15 36580144 36580242 -66914732 + B1_Mur2 SINE Alu 1 93 -56 1 864 434 110 0 27 chr15 36580261 36580336 -66914638 + (GGGA)n Simple_repeat Simple_repeat 1 73 0 1 864 255 186 136 0 chr15 36580415 36580474 -66914500 - B1F SINE Alu -82 67 1 1 864 488 316 32 32 chr15 36580814 36580971 -66914003 + RSINE1 SINE B4 5 161 -4 1 864 187 273 0 0 chr15 36581115 36581159 -66913815 - MIRc SINE MIR -124 144 101 1 864 326 321 78 82 chr15 36581427 36581453 -66913521 - B4A SINE B4 -44 248 225 1 864 234 0 0 0 chr15 36581453 36581479 -66913495 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1 864 326 321 78 82 chr15 36581479 36581523 -66913451 - B4A SINE B4 -68 224 187 1 864 180 0 0 0 chr15 36581523 36581543 -66913431 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 864 1108 60 0 0 chr15 36581543 36581676 -66913298 - B1_Mus2 SINE Alu -13 134 2 1 864 201 74 0 0 chr15 36581677 36581704 -66913270 + (TTA)n Simple_repeat Simple_repeat 3 29 0 1 864 326 321 78 82 chr15 36581704 36581860 -66913114 - B4A SINE B4 -106 186 20 1 864 224 260 14 0 chr15 36582320 36582393 -66912581 + G-rich Low_complexity Low_complexity 5 78 0 1 864 1229 114 0 11 chr15 36582552 36582730 -66912244 + B2_Mm2 SINE B2 1 176 -19 1 864 474 18 0 0 chr15 36582755 36582810 -66912164 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 2 864 1156 44 0 0 chr15 36583005 36583141 -66911833 + B1_Mus1 SINE Alu 2 137 -11 2 864 197 0 71 0 chr15 36583141 36583169 -66911805 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2 864 648 193 153 12 chr15 36583180 36583343 -66911631 + B3A SINE B2 5 190 -8 2 864 194 0 39 0 chr15 36583441 36583467 -66911507 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 864 606 196 325 0 chr15 36583467 36583630 -66911344 + B3 SINE B2 1 216 0 2 864 209 33 0 32 chr15 36584080 36584111 -66910863 + (TTA)n Simple_repeat Simple_repeat 2 31 0 2 864 288 206 109 16 chr15 36585999 36586063 -66908911 + tRNA-Ala-GCA tRNA tRNA 6 75 0 2 864 882 153 0 0 chr15 36586065 36586228 -66908746 + (CA)n Simple_repeat Simple_repeat 2 164 0 2 864 300 176 20 0 chr15 36586233 36586284 -66908690 + HAL1-3A_ME LINE L1 1976 2027 -831 2 864 660 168 0 0 chr15 36586284 36586409 -66908565 + (CA)n Simple_repeat Simple_repeat 1 125 0 2 864 531 316 105 39 chr15 36586828 36587109 -66907865 + Kanga1a DNA Tc2 4 303 -451 2 864 275 331 99 110 chr15 36587109 36587381 -66907593 + B4 SINE B4 4 272 -20 2 864 25 0 0 0 chr15 36587382 36587407 -66907567 + AT_rich Low_complexity Low_complexity 1 25 0 2 864 465 279 49 7 chr15 36587654 36587841 -66907133 + ID_B1 SINE B4 10 216 -76 2 864 330 26 0 0 chr15 36587841 36587880 -66907094 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 864 335 228 48 29 chr15 36588592 36588696 -66906278 + PB1D10 SINE Alu 4 109 -8 2 864 823 202 55 0 chr15 36588722 36588885 -66906089 - B3 SINE B2 -43 173 2 2 864 21 0 0 0 chr15 36588954 36588975 -66905999 + AT_rich Low_complexity Low_complexity 1 21 0 2 864 702 323 58 24 chr15 36588990 36589285 -66905689 - L3 LINE CR1 -708 3781 3477 2 864 295 345 95 76 chr15 36589324 36589422 -66905552 + ID_B1 SINE B4 8 221 -3 2 864 501 232 116 0 chr15 36589422 36589534 -66905440 + B1F SINE Alu 25 149 0 2 864 183 196 152 51 chr15 36589534 36589593 -66905381 + MIRc SINE MIR 79 143 -125 2 864 574 167 36 18 chr15 36589740 36589850 -66905124 - PB1D10 SINE Alu 0 117 6 2 864 306 0 0 0 chr15 36589854 36589888 -66905086 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 864 288 0 0 0 chr15 36589888 36589919 -66905055 + (TA)n Simple_repeat Simple_repeat 1 32 0 2 864 297 214 109 30 chr15 36589932 36590033 -66904941 - PB1D7 SINE Alu -1 119 11 2 864 2028 113 74 28 chr15 36590033 36590425 -66904549 - RMER17C LTR ERVK 0 410 1 2 864 489 269 54 0 chr15 36591014 36591144 -66903830 + ID_B1 SINE B4 82 218 -6 2 864 23 0 0 0 chr15 36591159 36591182 -66903792 + AT_rich Low_complexity Low_complexity 1 23 0 2 864 180 77 0 0 chr15 36591525 36591551 -66903423 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 864 853 140 8 23 chr15 36591554 36591686 -66903288 - B1_Mur4 SINE Alu -6 144 15 2 864 1188 51 0 0 chr15 36591686 36591824 -66903150 + B1_Mm SINE Alu 1 138 -9 2 864 240 86 0 0 chr15 36591824 36591859 -66903115 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 864 749 240 49 44 chr15 36591921 36592126 -66902848 - B3 SINE B2 -10 206 1 2 864 459 176 24 15 chr15 36592200 36592306 -66902668 + B1F SINE Alu 5 110 -10 2 864 261 167 102 45 chr15 36592686 36592774 -66902200 + PB1D10 SINE Alu 25 117 0 2 864 240 200 0 0 chr15 36592774 36592829 -66902145 + A-rich Low_complexity Low_complexity 4 58 0 2 864 281 219 51 64 chr15 36592958 36593036 -66901938 + ID_B1 SINE B4 147 223 -1 2 864 328 250 124 66 chr15 36593058 36593195 -66901779 - MER34 LTR ERV1 -18 553 380 2 864 247 256 0 62 chr15 36593196 36593269 -66901705 + A-rich Low_complexity Low_complexity 5 74 0 2 864 1121 113 6 0 chr15 36593269 36593446 -66901528 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 2 864 247 256 0 62 chr15 36593446 36593468 -66901506 + A-rich Low_complexity Low_complexity 75 94 0 2 864 351 0 0 0 chr15 36593649 36593688 -66901286 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 864 414 0 0 0 chr15 36593688 36593733 -66901241 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 864 732 220 14 7 chr15 36593741 36593883 -66901091 - B1_Mur1 SINE Alu -5 144 2 2 864 233 321 24 24 chr15 36593887 36593970 -66901004 - RSINE1 SINE B4 -37 128 46 2 864 682 154 45 15 chr15 36593950 36594082 -66900892 + B2_Mm2 SINE B2 55 190 -5 2 864 261 374 68 5 chr15 36594778 36594978 -66899996 - Tigger15a DNA TcMar -326 389 177 2 864 411 331 31 0 chr15 36594978 36595108 -66899866 + B1F SINE Alu 1 134 -15 2 864 876 84 8 0 chr15 36595180 36595313 -66899661 + B1_Mur3 SINE Alu 7 140 -10 2 864 198 0 0 0 chr15 36595313 36595335 -66899639 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 2 864 186 43 0 0 chr15 36595381 36595404 -66899570 + (TA)n Simple_repeat Simple_repeat 2 24 0 2 864 1237 42 0 0 chr15 36595436 36595579 -66899395 - B1_Mus1 SINE Alu -5 143 1 2 864 879 10 0 0 chr15 36596042 36596142 -66898832 + (TC)n Simple_repeat Simple_repeat 1 100 0 2 864 459 303 14 83 chr15 36596157 36596301 -66898673 - RSINE1 SINE B4 -8 157 24 2 864 488 300 0 91 chr15 36596670 36596690 -66898284 + ID_B1 SINE B4 74 209 -15 2 864 603 259 7 41 chr15 36596690 36596816 -66898158 + B1F SINE Alu 9 134 -15 2 864 297 0 0 0 chr15 36596816 36596849 -66898125 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 2 864 488 300 0 91 chr15 36596849 36596867 -66898107 + ID_B1 SINE B4 210 223 -1 2 864 401 273 58 0 chr15 36596877 36596998 -66897976 + B1F SINE Alu 4 131 -18 2 864 332 271 70 54 chr15 36597142 36597271 -66897703 + B1F1 SINE Alu 12 142 -7 2 864 320 359 0 11 chr15 36597309 36597402 -66897572 + RSINE1 SINE B4 4 95 -70 2 864 2733 53 96 13 chr15 36597454 36597839 -66897135 + BGLII LTR ERVK 5 421 0 2 864 192 246 0 0 chr15 36597911 36597980 -66896994 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 864 374 329 91 50 chr15 36598175 36598649 -66896325 + L1MEg LINE L1 779 1267 -4817 2 864 904 176 27 156 chr15 36598649 36598713 -66896261 - URR1B DNA MER1_type -2 223 188 2 864 1245 104 28 0 chr15 36598713 36598895 -66896079 + B2_Mm2 SINE B2 1 187 -8 2 864 904 176 27 156 chr15 36598895 36599086 -66895888 - URR1B DNA MER1_type -38 187 1 2 864 374 329 91 50 chr15 36599086 36599228 -66895746 + L1MEg LINE L1 1268 1420 -4664 2 864 533 275 14 42 chr15 36600121 36600265 -66894709 + ID_B1 SINE B4 84 223 -1 2 864 405 215 58 123 chr15 36600441 36600579 -66894395 + B1F1 SINE Alu 10 138 -11 2 864 1074 58 65 0 chr15 36600585 36600724 -66894250 - B1_Mus1 SINE Alu 0 148 1 2 864 338 162 24 119 chr15 36600740 36600824 -66894150 + ID2 SINE ID 3 78 -5 2 864 223 269 0 19 chr15 36601185 36601238 -66893736 - L3b LINE CR1 -5 477 426 2 864 844 177 7 0 chr15 36601492 36601633 -66893341 + B1_Mur1 SINE Alu 1 142 -7 2 864 416 252 199 13 chr15 36601671 36601854 -66893120 + B4A SINE B4 33 246 -46 2 864 382 189 9 9 chr15 36602003 36602115 -66892859 + (CA)n Simple_repeat Simple_repeat 1 112 0 2 864 1004 148 21 37 chr15 36602273 36602463 -66892511 - RLTR9A LTR ERVK 0 368 182 2 864 648 64 64 0 chr15 36602449 36602543 -66892431 - B1_Mus1 SINE Alu -47 101 2 2 864 24 67 0 0 chr15 36602756 36602801 -66892173 + AT_rich Low_complexity Low_complexity 1 45 0 2 864 593 225 14 35 chr15 36602976 36603119 -66891855 + B1F SINE Alu 1 140 -9 2 864 41071 17 1 6 chr15 36603133 36609333 -66885641 - L1Md_A LINE L1 -1 6581 416 2 864 536 131 16 108 chr15 36611007 36611023 -66883951 + MT2B LTR ERVL 148 151 -450 2 864 936 67 0 0 chr15 36611023 36611143 -66883831 + B1_Mus1 SINE Alu 1 120 -28 2 864 31 0 0 0 chr15 36611186 36611217 -66883757 + AT_rich Low_complexity Low_complexity 1 31 0 2 864 888 198 59 59 chr15 36611675 36611879 -66883095 + B3 SINE B2 7 210 -6 2 864 370 237 21 21 chr15 36611958 36612053 -66882921 - PB1D10 SINE Alu -10 107 13 2 864 275 336 0 42 chr15 36611968 36612111 -66882863 - ID_B1 SINE B4 -48 176 40 2 864 378 0 0 0 chr15 36612405 36612447 -66882527 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 864 628 226 4 229 chr15 36613224 36613499 -66881475 - B3 SINE B2 -2 214 2 2 864 368 130 14 0 chr15 36613507 36613576 -66881398 + (TCC)n Simple_repeat Simple_repeat 2 71 0 2 864 385 271 74 12 chr15 36613629 36613818 -66881156 + L1MA4A LINE L1 5689 5938 -365 2 864 236 133 0 118 chr15 36614035 36614103 -66880871 + CT-rich Low_complexity Low_complexity 3 62 0 2 864 254 206 0 12 chr15 36614105 36614172 -66880802 + B3A SINE B2 1 64 -131 2 864 964 318 152 38 chr15 36614734 36615172 -66879802 + MLT1E1 LTR MaLR 1 496 -158 2 864 335 304 62 0 chr15 36615172 36615284 -66879690 - PB1D7 SINE Alu -1 119 1 2 864 964 318 152 38 chr15 36615284 36615352 -66879622 + MLT1E1 LTR MaLR 497 565 -89 2 864 354 240 64 7 chr15 36615516 36615662 -66879312 + MIRb SINE MIR 49 201 -61 2 864 603 235 43 22 chr15 36615803 36615942 -66879032 + RSINE1 SINE B4 3 144 -21 2 864 402 268 70 26 chr15 36616085 36616174 -66878800 + RMER30 DNA MER1_type 12 106 -96 2 864 279 0 0 0 chr15 36616174 36616205 -66878769 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 864 358 267 196 22 chr15 36616205 36616275 -66878699 - Charlie12 DNA MER1_type -2778 95 14 2 864 232 278 25 25 chr15 36616625 36616743 -66878231 + RMER12 LTR ERVK 739 856 -466 2 864 477 235 0 150 chr15 36616741 36616861 -66878113 - RSINE1 SINE B4 0 165 64 3 864 285 305 0 0 chr15 36616899 36616981 -66877993 - ID4 SINE ID 0 83 2 3 864 377 308 18 27 chr15 36617194 36617304 -66877670 - PB1D10 SINE Alu 0 117 9 3 864 996 252 125 16 chr15 36617659 36617970 -66877004 - MTEb LTR MaLR -34 345 1 3 864 1183 82 0 0 chr15 36619395 36619542 -66875432 + B1_Mm SINE Alu 1 147 0 3 864 258 105 0 0 chr15 36619542 36619580 -66875394 + (A)n Simple_repeat Simple_repeat 1 38 0 3 864 342 0 0 0 chr15 36620229 36620267 -66874707 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 864 667 276 172 20 chr15 36620268 36620512 -66874462 - B4 SINE B4 -9 283 3 3 864 243 324 66 9 chr15 36620519 36620625 -66874349 - PB1D10 SINE Alu -3 114 3 3 864 1014 267 117 29 chr15 36620639 36621059 -66873915 - RLTR12B LTR ERVK -25 503 47 3 864 336 308 82 7 chr15 36621502 36621649 -66873325 + Charlie5 DNA MER1_type 2467 2624 0 3 864 412 221 238 38 chr15 36622255 36622415 -66872559 + ID_B1 SINE B4 1 192 -32 3 864 1261 42 0 0 chr15 36622936 36623080 -66871894 - B1_Mm SINE Alu -2 145 2 3 864 538 245 61 22 chr15 36623199 36623409 -66871565 - RLTR11B LTR ERVK -30 498 284 3 864 942 248 22 49 chr15 36623444 36623739 -66871235 - RLTR11B LTR ERVK -243 284 5 3 864 268 214 0 54 chr15 36623935 36624009 -66870965 + CT-rich Low_complexity Low_complexity 2 71 0 3 864 394 261 44 18 chr15 36624039 36624152 -66870822 - B1F1 SINE Alu -32 117 2 3 864 520 299 55 22 chr15 36625387 36625629 -66869345 - MLT1J LTR MaLR -210 238 30 3 864 249 21 0 78 chr15 36625830 36625875 -66869099 + (TTTTTG)n Simple_repeat Simple_repeat 1 41 0 3 864 186 71 0 0 chr15 36625875 36625903 -66869071 + (TTGG)n Simple_repeat Simple_repeat 1 28 0 3 864 253 343 146 5 chr15 36626532 36626737 -66868237 + L1MC LINE L1 3711 3944 -2202 3 864 244 270 40 0 chr15 36626958 36626978 -66867996 + ORR1B1-int LTR MaLR 624 648 -861 3 864 941 167 0 0 chr15 36626978 36627122 -66867852 + B1_Mus1 SINE Alu 3 146 -2 3 864 26 0 0 0 chr15 36627699 36627725 -66867249 + AT_rich Low_complexity Low_complexity 1 26 0 3 864 867 109 84 35 chr15 36627818 36627960 -66867014 + B1_Mur3 SINE Alu 1 149 0 3 864 387 192 0 0 chr15 36627969 36628047 -66866927 + GA-rich Low_complexity Low_complexity 2 79 0 3 864 890 161 184 53 chr15 36628129 36628319 -66866655 - B3 SINE B2 0 216 2 3 864 2136 108 22 6 chr15 36628386 36628702 -66866272 - ORR1A4 LTR MaLR -8 321 1 3 864 387 0 0 0 chr15 36629164 36629207 -66865767 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 864 342 0 0 0 chr15 36629208 36629246 -66865728 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 864 669 297 179 22 chr15 36629289 36629602 -66865372 + MLT1A0 LTR MaLR 4 365 0 3 864 31 26 0 0 chr15 36630520 36630558 -66864416 + AT_rich Low_complexity Low_complexity 1 38 0 3 864 302 299 82 41 chr15 36630569 36630691 -66864283 - RSINE1 SINE B4 -1 164 38 3 864 339 231 115 44 chr15 36630837 36630950 -66864024 - B1F SINE Alu 0 149 29 3 864 278 296 79 95 chr15 36631292 36631482 -66863492 + MIR SINE MIR 76 262 0 3 864 236 330 97 132 chr15 36631970 36632278 -66862696 + MLT1A0 LTR MaLR 4 309 -56 3 864 279 0 0 0 chr15 36632278 36632309 -66862665 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3 864 1146 28 0 99 chr15 36632309 36632470 -66862504 - B1_Mm SINE Alu -2 145 1 3 864 236 330 97 132 chr15 36632470 36632530 -66862444 + MLT1A0 LTR MaLR 310 359 -6 3 864 1575 171 99 48 chr15 36632647 36633059 -66861915 - Lx4B LINE L1 0 7058 6626 3 864 577 88 10 10 chr15 36633370 36633473 -66861501 + (GA)n Simple_repeat Simple_repeat 2 104 0 3 864 195 129 0 0 chr15 36634548 36634579 -66860395 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 3 864 306 224 149 0 chr15 36634670 36634737 -66860237 - B1F SINE Alu -68 81 5 3 864 1046 209 33 19 chr15 36635058 36635273 -66859701 - URR1B DNA MER1_type -5 220 3 3 864 574 279 0 52 chr15 36635493 36635629 -66859345 + RSINE1 SINE B4 21 149 -16 3 864 216 0 0 0 chr15 36635664 36635688 -66859286 + (CAAT)n Simple_repeat Simple_repeat 1 24 0 3 864 578 265 0 50 chr15 36636740 36636879 -66858095 + RSINE1 SINE B4 3 134 -31 3 864 1306 108 64 5 chr15 36637140 36637344 -66857630 + B3 SINE B2 1 216 0 3 864 240 274 37 120 chr15 36637759 36637867 -66857107 + MER34 LTR ERV1 376 474 -68 3 864 250 240 104 57 chr15 36638350 36638456 -66856518 - LTR41 LTR ERVL -606 162 52 3 864 216 0 0 0 chr15 36638614 36638638 -66856336 + (T)n Simple_repeat Simple_repeat 1 24 0 3 864 914 156 0 39 chr15 36638882 36639036 -66855938 + B1_Mur2 SINE Alu 2 149 0 3 864 267 281 161 38 chr15 36639055 36639266 -66855708 + Tigger16a DNA Tigger 486 722 -211 3 864 882 238 9 29 chr15 36639613 36639896 -66855078 - RLTR26 LTR ERVK -648 258 1 3 864 264 259 62 69 chr15 36639921 36639936 -66855038 - YREP_Mm Unknown Unknown -1489 323 182 3 864 1010 39 31 0 chr15 36639936 36640064 -66854910 + B1_Mus1 SINE Alu 11 142 -6 3 864 239 0 32 0 chr15 36640066 36640097 -66854877 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 3 864 1285 41 0 0 chr15 36640814 36640961 -66854013 - B1_Mus1 SINE Alu 0 148 2 3 864 281 145 16 0 chr15 36641323 36641385 -66853589 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 864 281 26 0 0 chr15 36641409 36641447 -66853527 - MERVL-int LTR ERVL 0 5485 5448 3 864 308 113 38 101 chr15 36641447 36641526 -66853448 - ORR1A1-int LTR MaLR -1323 640 567 3 864 778 121 262 15 chr15 36641526 36641728 -66853246 - MERVL_2A-int LTR ERVL -132 5629 5378 3 864 3404 56 25 0 chr15 36641728 36642172 -66852802 - ORR1A1-int LTR MaLR -1337 455 1 3 864 2393 47 63 45 chr15 36642176 36642508 -66852466 - ORR1A1 LTR MaLR -8 338 1 3 864 822 338 51 14 chr15 36642537 36642888 -66852086 + MLT1A LTR MaLR 6 369 -5 3 864 2815 214 76 42 chr15 36642888 36643760 -66851214 - RMER13A LTR ERVK -31 877 1 3 864 656 196 321 12 chr15 36643951 36644116 -66850858 + B3 SINE B2 1 216 0 3 864 1186 49 14 0 chr15 36644131 36644275 -66850699 + B1_Mm SINE Alu 2 147 0 3 864 301 176 27 0 chr15 36644516 36644590 -66850384 + C-rich Low_complexity Low_complexity 3 78 0 3 864 634 239 21 14 chr15 36644660 36644804 -66850170 - B1_Mus2 SINE Alu -2 145 1 3 864 194 267 14 36 chr15 36645139 36645279 -66849695 + (CATA)n Simple_repeat Simple_repeat 4 140 0 3 864 324 0 0 0 chr15 36645404 36645440 -66849534 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 864 6488 90 21 27 chr15 36646704 36647697 -66847277 - Lx LINE L1 -2 6652 5666 3 864 403 374 65 14 chr15 36647771 36647985 -66846989 + MIR SINE MIR 16 240 -22 3 864 431 291 12 74 chr15 36648214 36648272 -66846702 + MER2 DNA MER2_type 82 135 -210 3 864 1363 151 4 66 chr15 36648272 36648513 -66846461 + URR1A DNA MER1_type 1 226 0 3 864 431 291 12 74 chr15 36648513 36648612 -66846362 + MER2 DNA MER2_type 136 229 -116 3 864 237 245 57 0 chr15 36648612 36648665 -66846309 + RMER30 DNA MER1_type 3 58 -144 3 864 319 226 10 10 chr15 36648689 36648792 -66846182 + (CA)n Simple_repeat Simple_repeat 1 103 0 3 864 1221 76 53 0 chr15 36649405 36649576 -66845398 - B2_Mm2 SINE B2 -14 181 2 3 864 2253 168 155 26 chr15 36649576 36649882 -66845092 - RLTR11A LTR ERVK -3 525 160 3 864 1602 27 38 0 chr15 36649882 36650067 -66844907 - B2_Mm1a SINE B2 0 193 2 3 864 2253 168 155 26 chr15 36650067 36650225 -66844749 - RLTR11A LTR ERVK -369 159 1 3 864 989 122 0 0 chr15 36650279 36650410 -66844564 + B1_Mus2 SINE Alu 1 131 -16 3 864 502 232 20 0 chr15 36650411 36650510 -66844464 + MTC-int LTR MaLR 258 358 -900 3 864 2563 183 50 17 chr15 36650720 36651237 -66843737 - RMER5 LTR ERV1 0 534 1 3 864 354 301 71 31 chr15 36652401 36652601 -66842373 + MIRc SINE MIR 49 252 -10 3 864 1554 149 237 66 chr15 36652651 36653089 -66841885 - MT2B2 LTR ERVL -71 513 1 3 864 1497 227 110 40 chr15 36653112 36653655 -66841319 + RLTR26 LTR ERVK 2 626 -16 3 864 251 292 59 50 chr15 36654106 36654225 -66840749 - MLT1J LTR MaLR -84 428 309 3 864 1880 126 91 130 chr15 36654808 36655302 -66839672 + IAPLTR2_Mm LTR ERVK 1 475 0 3 864 2672 187 61 36 chr15 36655338 36655916 -66839058 + RMER20B LTR ERVK 36 627 0 3 864 957 174 167 17 chr15 36656170 36656463 -66838511 + RMER17C LTR ERVK 35 371 -39 3 864 1883 209 77 119 chr15 36656467 36657307 -66837667 + RMER17C-int LTR ERVK 3 807 -2431 3 864 6785 146 38 77 chr15 36657445 36658904 -66836070 + RMER17C-int LTR ERVK 882 2284 -954 3 864 207 0 0 0 chr15 36658915 36658938 -66836036 + (A)n Simple_repeat Simple_repeat 1 23 0 3 864 3701 140 12 3 chr15 36658938 36659512 -66835462 - RLTR17 LTR ERVK -16 676 98 3 864 1964 106 137 104 chr15 36659540 36659685 -66835289 + RMER17C-int LTR ERVK 2391 2555 -683 3 864 258 200 0 0 chr15 36659685 36659730 -66835244 - LSU-rRNA_Hsa rRNA rRNA -789 4246 4202 3 864 1964 106 137 104 chr15 36659730 36659993 -66834981 + RMER17C-int LTR ERVK 2556 2858 -380 3 864 486 0 0 0 chr15 36659993 36660047 -66834927 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 864 2115 126 9 9 chr15 36660048 36660392 -66834582 + RMER17C-int LTR ERVK 2895 3238 0 3 864 1523 136 158 43 chr15 36660392 36660760 -66834214 + RMER17C LTR ERVK 1 410 0 3 864 523 239 94 62 chr15 36660862 36661054 -66833920 - B3A SINE B2 0 198 1 3 864 495 0 0 0 chr15 36661103 36661158 -66833816 + (TTCC)n Simple_repeat Simple_repeat 2 56 0 3 864 423 0 0 0 chr15 36661158 36661205 -66833769 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 864 290 192 0 88 chr15 36661219 36661281 -66833693 - B1_Mur4 SINE Alu 0 150 91 3 864 1139 57 140 0 chr15 36661281 36661438 -66833536 + B2_Mm1t SINE B2 1 179 -14 3 864 290 192 0 88 chr15 36661438 36661455 -66833519 - B1_Mur4 SINE Alu -60 90 78 3 864 443 124 308 34 chr15 36661504 36661621 -66833353 + B2_Mm2 SINE B2 47 195 0 3 864 597 177 0 0 chr15 36661621 36661717 -66833257 - B1_Mus1 SINE Alu -48 100 5 3 864 371 200 18 136 chr15 36661717 36661731 -66833243 - MT2B LTR ERVL -347 254 158 3 864 393 280 144 58 chr15 36662230 36662590 -66832384 - Lx8 LINE L1 0 7473 7083 3 864 898 287 22 4 chr15 36662692 36662965 -66832009 - Lx7 LINE L1 -586 7110 6833 4 864 196 130 43 0 chr15 36663099 36663145 -66831829 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 864 244 151 55 0 chr15 36663160 36663233 -66831741 + (CATATA)n Simple_repeat Simple_repeat 6 82 0 4 864 205 333 75 38 chr15 36663882 36663988 -66830986 - MIR SINE MIR -70 192 83 4 864 298 157 20 0 chr15 36664659 36664710 -66830264 + MLT2B5 LTR ERVL 1 52 -665 4 864 255 239 185 120 chr15 36664710 36664859 -66830115 + MTEa LTR MaLR 1 213 -166 4 864 306 293 73 8 chr15 36666247 36666371 -66828603 + MLT2B1 LTR ERVL 430 561 -6 4 864 3840 202 74 3 chr15 36667145 36668034 -66826940 - Lx2B LINE L1 -37 7021 5963 4 864 1594 230 122 18 chr15 36668073 36668130 -66826844 - RLTR20A2 LTR ERVK -36 542 481 4 864 423 0 0 0 chr15 36668130 36668177 -66826797 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 864 1594 230 122 18 chr15 36668177 36668610 -66826364 - RLTR20A2 LTR ERVK -98 480 1 4 864 864 125 97 3 chr15 36668614 36668792 -66826182 - Lx3A LINE L1 -1012 5969 5773 4 864 507 284 27 7 chr15 36669157 36669306 -66825668 - RSINE1 SINE B4 -10 155 4 4 864 785 193 154 23 chr15 36669416 36669687 -66825287 + MTD LTR MaLR 46 419 0 4 864 479 290 61 12 chr15 36669850 36670014 -66824960 - MER58A DNA MER1_type -8 216 45 4 864 473 268 3 0 chr15 36670142 36670458 -66824516 + (TG)n Simple_repeat Simple_repeat 1 317 0 4 864 426 253 0 0 chr15 36670494 36670652 -66824322 + (TG)n Simple_repeat Simple_repeat 1 158 0 4 864 240 307 51 26 chr15 36670884 36671001 -66823973 - PB1D9 SINE Alu 0 120 1 4 864 449 227 118 0 chr15 36671018 36671128 -66823846 - ID_B1 SINE B4 0 224 102 4 864 191 320 153 16 chr15 36671130 36671254 -66823720 + MER5A DNA MER1_type 48 188 -1 4 864 766 166 272 0 chr15 36671372 36671541 -66823433 - B3 SINE B2 0 216 2 4 864 245 264 20 81 chr15 36671620 36671719 -66823255 - Lx7 LINE L1 -23 7673 7581 4 864 186 43 0 0 chr15 36671722 36671745 -66823229 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 864 591 53 0 0 chr15 36671745 36671819 -66823155 + (GA)n Simple_repeat Simple_repeat 2 76 0 4 864 1476 67 0 25 chr15 36671997 36672196 -66822778 - B2_Mm2 SINE B2 0 195 2 4 864 332 293 90 28 chr15 36672889 36673033 -66821941 - MER5B DNA MER1_type -2 176 24 4 864 252 378 20 40 chr15 36673151 36673300 -66821674 + MIRm SINE MIR 1 146 -130 4 864 444 257 27 9 chr15 36673316 36673426 -66821548 + PB1D10 SINE Alu 6 117 0 4 864 272 336 24 65 chr15 36674344 36674468 -66820506 + MIR SINE MIR 16 134 -74 4 864 534 292 7 39 chr15 36674629 36674782 -66820192 - B1F SINE Alu -1 148 1 4 864 213 224 155 0 chr15 36674875 36674933 -66820041 - ID4 SINE ID -15 68 2 4 864 183 188 0 0 chr15 36675737 36675785 -66819189 + C-rich Low_complexity Low_complexity 1 48 0 4 864 255 170 0 0 chr15 36675910 36675957 -66819017 + C-rich Low_complexity Low_complexity 2 48 0 4 864 573 256 16 0 chr15 36676023 36676152 -66818822 + B1F1 SINE Alu 6 136 -13 4 864 262 174 43 0 chr15 36676187 36676233 -66818741 + RSINE1 SINE B4 97 144 -21 4 864 434 18 18 0 chr15 36676266 36676321 -66818653 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 864 204 167 0 23 chr15 36676356 36676399 -66818575 + (TTA)n Simple_repeat Simple_repeat 2 43 0 4 864 259 271 68 68 chr15 36676473 36676576 -66818398 - MIR SINE MIR -104 158 56 4 864 418 328 73 5 chr15 36677092 36677297 -66817677 - MLT1A0 LTR MaLR -66 299 81 4 864 1911 161 81 6 chr15 36677470 36677827 -66817147 - ORR1C2 LTR MaLR 0 384 1 4 864 311 301 48 0 chr15 36677948 36678031 -66816943 + B1F1 SINE Alu 12 98 -51 4 864 1087 69 29 0 chr15 36678667 36678842 -66816132 + (TCC)n Simple_repeat Simple_repeat 1 180 0 4 864 275 333 19 38 chr15 36679292 36679451 -66815523 + L1MC4 LINE L1 6299 6454 -1428 4 864 617 208 28 0 chr15 36679508 36679614 -66815360 - RLTR20B3 LTR ERVK -27 550 442 4 864 2319 174 37 37 chr15 36679780 36680239 -66814735 - RLTR20B3 LTR ERVK -106 471 13 4 864 553 268 0 8 chr15 36680303 36680425 -66814549 - B3 SINE B2 -4 212 92 4 864 714 277 97 137 chr15 36680425 36681140 -66813834 + RMER13A LTR ERVK 1 686 -174 4 864 282 261 135 11 chr15 36681233 36681322 -66813652 - B3A SINE B2 -96 102 3 4 864 410 333 42 0 chr15 36681366 36681486 -66813488 + RSINE1 SINE B4 12 136 -29 4 864 366 74 0 0 chr15 36681493 36681547 -66813427 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 864 494 187 22 0 chr15 36681630 36681721 -66813253 + B4A SINE B4 8 100 -192 4 864 202 236 0 77 chr15 36681812 36681968 -66813006 + (TGG)n Simple_repeat Simple_repeat 3 146 0 4 864 317 269 135 59 chr15 36681973 36682143 -66812831 + B4 SINE B4 92 274 -18 4 864 1298 276 74 36 chr15 36682230 36682757 -66812217 + L1MC4 LINE L1 6681 7227 -815 4 864 486 254 75 32 chr15 36683073 36683260 -66811714 + L1MC4 LINE L1 7683 7877 -165 4 864 530 263 73 0 chr15 36683532 36683580 -66811394 - RSINE1 SINE B4 -17 148 94 4 864 246 23 45 23 chr15 36683580 36683624 -66811350 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 4 864 530 263 73 0 chr15 36683624 36683712 -66811262 - RSINE1 SINE B4 -72 93 3 4 864 203 203 17 17 chr15 36683748 36683808 -66811166 + T-rich Low_complexity Low_complexity 1 60 0 4 864 312 159 0 39 chr15 36683823 36683890 -66811084 - B2_Mm2 SINE B2 -107 109 47 4 864 960 114 133 0 chr15 36683922 36684080 -66810894 - B2_Mm1a SINE B2 -14 179 1 4 864 452 192 124 88 chr15 36684210 36684347 -66810627 - B1_Mur1 SINE Alu -6 143 2 4 864 538 272 142 4 chr15 36685409 36685634 -66809340 + MLT1A LTR MaLR 119 374 0 4 864 606 212 76 0 chr15 36685709 36685841 -66809133 + B1F1 SINE Alu 1 142 -7 4 864 1257 162 15 5 chr15 36686535 36686740 -66808234 - B3 SINE B2 0 216 10 4 864 346 107 0 0 chr15 36686769 36686825 -66808149 + RLTR10D LTR ERVK 4 59 -300 4 864 1018 31 0 0 chr15 36686828 36686955 -66808019 - B1_Mm SINE Alu -20 127 1 4 864 1188 209 56 41 chr15 36686955 36687265 -66807709 + RLTR10D LTR ERVK 45 359 0 4 864 563 0 0 15 chr15 36687371 36687439 -66807535 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 864 988 125 0 116 chr15 36687500 36687681 -66807293 + ORR1A3 LTR MaLR 1 160 -166 4 864 360 277 42 21 chr15 36687688 36687784 -66807190 - RLTR23 LTR ERV1 -2 428 331 4 864 1209 251 41 19 chr15 36687813 36688130 -66806844 + RLTR22_Mur LTR ERVK 486 809 -1039 4 864 463 204 36 18 chr15 36688170 36688280 -66806694 + RLTR22_Mur LTR ERVK 1604 1715 -133 4 864 206 143 39 39 chr15 36688530 36688581 -66806393 + (GGGTG)n Simple_repeat Simple_repeat 2 52 0 4 864 1049 166 97 5 chr15 36688817 36689023 -66805951 + URR1B DNA MER1_type 1 225 0 4 864 341 270 121 28 chr15 36689408 36689549 -66805425 - MLT1A1 LTR MaLR 0 408 255 4 864 414 0 0 0 chr15 36689569 36689615 -66805359 + (CAGA)n Simple_repeat Simple_repeat 3 48 0 4 864 2623 195 14 34 chr15 36689730 36689996 -66804978 - RMER1B Other Other -219 847 587 4 864 2952 65 52 12 chr15 36689996 36690401 -66804573 + BGLII LTR ERVK 1 421 0 4 864 2623 198 14 44 chr15 36690401 36690696 -66804278 - RMER1B Other Other -480 586 353 4 864 800 216 157 14 chr15 36690713 36690929 -66804045 + RLTR20D LTR ERVK 45 291 -277 4 864 400 254 148 28 chr15 36690909 36691051 -66803923 + RLTR20D LTR ERVK 407 565 -3 4 864 181 309 36 0 chr15 36691693 36691748 -66803226 - MIRm SINE MIR -112 164 108 4 864 643 246 189 41 chr15 36692511 36692785 -66802189 + MLT1A LTR MaLR 58 351 -23 4 864 1308 34 0 0 chr15 36692785 36692933 -66802041 - B1_Mus1 SINE Alu 0 148 1 4 864 513 281 87 106 chr15 36692933 36692969 -66802005 + MLT1A LTR MaLR 326 362 -3 4 864 422 212 16 66 chr15 36693434 36693555 -66801419 + PB1D10 SINE Alu 1 115 -2 4 864 402 21 0 0 chr15 36693648 36693695 -66801279 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 864 643 251 50 81 chr15 36694022 36694243 -66800731 - B3 SINE B2 0 216 3 4 864 636 225 124 50 chr15 36694306 36694507 -66800467 + L1MB5 LINE L1 5959 6174 0 4 864 253 252 118 29 chr15 36694566 36694668 -66800306 + RSINE1 SINE B4 38 148 -17 4 864 1221 183 163 31 chr15 36694889 36695177 -66799797 - RMER15 LTR ERVL -7 568 243 4 864 325 243 206 30 chr15 36695670 36695903 -66799071 + B4A SINE B4 1 274 -18 4 864 292 167 14 14 chr15 36695903 36695976 -66798998 + GA-rich Low_complexity Low_complexity 3 75 0 4 864 1251 48 0 0 chr15 36696223 36696369 -66798605 + B1_Mm SINE Alu 2 147 0 4 864 323 320 73 8 chr15 36696929 36697052 -66797922 - RSINE1 SINE B4 -31 134 4 4 864 252 185 0 36 chr15 36697459 36697515 -66797459 + CT-rich Low_complexity Low_complexity 1 54 0 4 864 293 252 275 8 chr15 36699231 36699351 -66795623 - RSINE1 SINE B4 -5 160 9 4 865 243 0 0 0 chr15 36700374 36700401 -66794573 + (CACCC)n Simple_repeat Simple_repeat 3 29 0 4 865 223 225 0 0 chr15 36700528 36700568 -66794406 - MIR SINE MIR -4 258 219 4 865 289 326 53 0 chr15 36700534 36700629 -66794345 - L2c LINE L2 -16 3371 3272 4 865 267 31 0 0 chr15 36700738 36700770 -66794204 + (GGA)n Simple_repeat Simple_repeat 2 33 0 4 865 912 155 5 27 chr15 36701456 36701642 -66793332 - MER34B-int LTR ERV1 -3243 2113 1932 4 865 319 180 33 180 chr15 36701696 36701818 -66793156 - MER34B-int LTR ERV1 -3415 1941 1838 4 865 436 296 26 90 chr15 36703700 36703856 -66791118 - ID_B1 SINE B4 -70 154 9 4 865 270 293 90 83 chr15 36703915 36704060 -66790914 + B2_Mm2 SINE B2 2 147 -48 4 865 518 87 0 0 chr15 36704075 36704144 -66790830 + B1_Mus2 SINE Alu 66 134 -13 4 865 399 244 43 43 chr15 36704655 36704749 -66790225 - B1F SINE Alu -10 139 46 4 865 689 229 14 56 chr15 36705525 36705738 -66789236 + B3 SINE B2 1 204 -12 4 865 317 226 46 35 chr15 36706232 36706319 -66788655 + PB1D7 SINE Alu 26 113 -7 4 865 392 274 93 27 chr15 36707076 36707097 -66787877 + B4 SINE B4 64 94 -198 4 865 497 206 130 0 chr15 36707097 36707228 -66787746 + B1_Mus1 SINE Alu 1 148 0 4 865 310 206 110 30 chr15 36707734 36707834 -66787140 + B3 SINE B2 108 215 -1 4 865 1188 101 34 6 chr15 36709048 36709227 -66785747 - B2_Mm2 SINE B2 -10 185 2 4 865 592 204 235 7 chr15 36709740 36709893 -66785081 + B3 SINE B2 1 188 -28 5 865 249 159 0 0 chr15 36709895 36709939 -66785035 + GA-rich Low_complexity Low_complexity 3 46 0 5 865 290 310 62 14 chr15 36709947 36710091 -66784883 + RSINE1 SINE B4 5 155 -10 5 865 311 252 117 36 chr15 36710335 36710446 -66784528 + PB1D9 SINE Alu 1 120 0 5 865 230 186 0 0 chr15 36710463 36710506 -66784468 + ID_B1 SINE B4 112 154 -70 5 865 276 206 17 0 chr15 36711405 36711472 -66783502 + PB1D7 SINE Alu 46 119 -1 5 865 565 274 124 42 chr15 36711656 36711915 -66783059 - B4A SINE B4 -12 280 1 5 865 306 304 96 21 chr15 36711954 36712048 -66782926 - PB1D10 SINE Alu -6 111 11 5 865 252 244 176 59 chr15 36712082 36712269 -66782705 - ID_B1 SINE B4 -14 210 2 5 865 748 263 28 85 chr15 36712799 36713011 -66781963 - B3 SINE B2 0 216 17 5 865 519 236 153 29 chr15 36713069 36713239 -66781735 + B3 SINE B2 3 193 -23 5 865 256 229 41 0 chr15 36713312 36713378 -66781596 + PB1D9 SINE Alu 68 147 0 5 865 228 220 0 20 chr15 36713387 36713438 -66781536 + RSINE1 SINE B4 2 51 -114 5 865 759 153 40 0 chr15 36714203 36714327 -66780647 - B3 SINE B2 -87 129 1 5 865 1353 174 230 3 chr15 36714360 36714695 -66780279 + MTC LTR MaLR 11 421 0 5 865 4516 165 208 20 chr15 36714697 36715754 -66779220 + MTC-int LTR MaLR 3 1258 0 5 865 599 163 207 0 chr15 36715758 36715893 -66779081 + MTC LTR MaLR 1 163 -258 5 865 688 162 260 23 chr15 36715904 36716081 -66778893 + URR1B DNA MER1_type 2 220 -5 5 865 438 297 62 31 chr15 36716005 36716165 -66778809 + MTB_Mm LTR MaLR 98 262 -145 5 865 485 278 226 41 chr15 36716205 36716400 -66778574 + MTEb LTR MaLR 53 283 -96 5 865 436 202 125 10 chr15 36716487 36716600 -66778374 - PB1D9 SINE Alu -11 139 10 5 865 249 302 119 28 chr15 36716508 36716617 -66778357 - B4 SINE B4 -94 198 80 5 865 186 264 75 0 chr15 36719158 36719211 -66775763 + L3 LINE CR1 123 179 -4310 5 865 201 139 0 0 chr15 36719912 36719955 -66775019 + (A)n Simple_repeat Simple_repeat 1 43 0 5 865 203 167 0 0 chr15 36721005 36721047 -66773927 + A-rich Low_complexity Low_complexity 1 42 0 5 865 24 77 0 0 chr15 36722866 36722918 -66772056 + GC_rich Low_complexity Low_complexity 1 52 0 5 865 25 51 0 0 chr15 36723093 36723132 -66771842 + GC_rich Low_complexity Low_complexity 1 39 0 5 865 189 107 0 0 chr15 36723282 36723310 -66771664 + (CGG)n Simple_repeat Simple_repeat 2 29 0 5 865 24 0 0 0 chr15 36723493 36723517 -66771457 + GC_rich Low_complexity Low_complexity 1 24 0 5 865 327 308 100 6 chr15 36725939 36726099 -66768875 + MLT1J1 LTR MaLR 7 181 -263 5 865 1652 233 93 9 chr15 36726224 36726687 -66768287 + RMER1B Other Other 7 508 -558 5 865 2563 203 101 61 chr15 36726686 36727445 -66767529 + RMER1A Other Other 8 797 -233 5 865 1126 89 0 20 chr15 36727446 36727595 -66767379 + B1_Mus1 SINE Alu 3 148 0 5 865 3382 152 26 9 chr15 36727606 36728175 -66766799 - RLTR17 LTR ERVK -16 676 98 5 865 1187 118 132 0 chr15 36728193 36728405 -66766569 + RMER1A Other Other 791 1030 0 5 865 702 164 0 0 chr15 36728425 36728529 -66766445 + B1_Mur2 SINE Alu 1 104 -45 5 865 267 205 96 117 chr15 36728851 36728945 -66766029 + B4A SINE B4 1 92 -200 5 865 1614 242 84 29 chr15 36729218 36729708 -66765266 + Lx8 LINE L1 6821 7337 -136 5 865 22 35 0 0 chr15 36730251 36730280 -66764694 + AT_rich Low_complexity Low_complexity 1 29 0 5 865 2047 224 129 12 chr15 36730304 36730814 -66764160 - RMER15 LTR ERVL -5 570 1 5 865 384 22 0 0 chr15 36730845 36730890 -66764084 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 865 264 59 0 0 chr15 36731151 36731185 -66763789 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 5 865 398 263 10 20 chr15 36731197 36731298 -66763676 - ID_B1 SINE B4 -55 169 70 5 865 245 271 0 167 chr15 36731397 36731481 -66763493 - BC1_Mm scRNA scRNA -80 72 3 5 865 446 170 11 0 chr15 36732022 36732116 -66762858 + (TG)n Simple_repeat Simple_repeat 2 96 0 5 865 287 65 22 0 chr15 36732220 36732266 -66762708 + (GA)n Simple_repeat Simple_repeat 1 47 0 5 865 517 330 39 6 chr15 36732268 36732448 -66762526 - ID_B1 SINE B4 -37 187 2 5 865 316 299 83 14 chr15 36732853 36733070 -66761904 - RMER12 LTR ERVK -364 958 727 5 865 227 255 0 41 chr15 36734078 36734250 -66760724 + G-rich Low_complexity Low_complexity 3 167 0 5 865 392 243 0 38 chr15 36734261 36734551 -66760423 + G-rich Low_complexity Low_complexity 1 278 0 5 865 356 265 0 38 chr15 36734562 36734668 -66760306 + G-rich Low_complexity Low_complexity 4 105 0 5 865 226 256 162 25 chr15 36734964 36734975 -66759999 + B1F SINE Alu 42 132 -17 5 865 364 188 72 0 chr15 36734975 36735044 -66759930 + ID_B1 SINE B4 134 207 -17 5 865 270 0 0 0 chr15 36735176 36735206 -66759768 + (TC)n Simple_repeat Simple_repeat 2 31 0 5 865 295 234 72 31 chr15 36735339 36735436 -66759538 - PB1D9 SINE Alu -1 119 19 5 865 260 360 103 27 chr15 36735751 36735974 -66759000 + MLT1J LTR MaLR 22 261 -251 5 865 498 229 0 99 chr15 36736185 36736316 -66758658 - B1_Mur3 SINE Alu -15 134 17 5 865 391 359 45 7 chr15 36736357 36736511 -66758463 - RSINE1 SINE B4 0 165 6 5 865 591 179 11 0 chr15 36736589 36736684 -66758290 - B3 SINE B2 -120 96 1 5 865 418 243 93 29 chr15 36736690 36736830 -66758144 - B1F2 SINE Alu 0 149 1 5 865 204 158 0 0 chr15 36736905 36736943 -66758031 + CT-rich Low_complexity Low_complexity 3 40 0 5 865 388 266 121 6 chr15 36737174 36737348 -66757626 - L1MD1 LINE L1 -136 6106 5913 5 865 338 270 45 53 chr15 36737394 36737527 -66757447 - L1MD1 LINE L1 -541 5818 5687 5 865 2018 185 34 11 chr15 36737528 36737883 -66757091 - MTC LTR MaLR -13 408 46 5 865 485 198 22 0 chr15 36737890 36737981 -66756993 - B1_Mur3 SINE Alu -8 141 49 5 865 1234 129 5 0 chr15 36738045 36738238 -66756736 - B2_Mm2 SINE B2 0 195 2 5 865 3869 176 35 156 chr15 36738730 36739890 -66755084 + RMER1B Other Other 44 1063 -3 5 865 400 292 51 51 chr15 36739895 36740032 -66754942 + B1F2 SINE Alu 12 148 -1 5 865 362 272 97 35 chr15 36740398 36740645 -66754329 - HAL1-3A_ME LINE L1 -420 2438 2280 5 865 399 267 43 51 chr15 36740648 36740786 -66754188 - B1F SINE Alu -9 140 4 5 865 248 292 83 28 chr15 36741328 36741437 -66753537 + MLT1J LTR MaLR 294 408 0 5 865 255 328 7 96 chr15 36741442 36741577 -66753397 - LTR16B1 LTR ERVL -354 126 4 5 865 1068 70 0 0 chr15 36742022 36742164 -66752810 + (TTTC)n Simple_repeat Simple_repeat 2 143 0 5 865 432 256 0 49 chr15 36742227 36742350 -66752624 - PB1D10 SINE Alu 0 117 1 5 865 46 0 0 0 chr15 36742848 36742894 -66752080 + AT_rich Low_complexity Low_complexity 1 46 0 5 865 296 290 14 0 chr15 36742941 36743010 -66751964 + ID_B1 SINE B4 148 217 -7 5 865 913 261 105 73 chr15 36743072 36743612 -66751362 - Tigger7 DNA MER2_type -7 2484 2156 5 865 357 82 0 0 chr15 36744515 36744564 -66750410 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 865 350 261 92 43 chr15 36744571 36744755 -66750219 + L1MC LINE L1 4884 5076 -1070 5 865 450 150 174 16 chr15 36744860 36744987 -66749987 + B1_Mus2 SINE Alu 24 147 -1 5 865 259 254 62 137 chr15 36745027 36745060 -66749914 - B1_Mm SINE Alu 0 147 13 5 865 405 240 18 115 chr15 36745060 36745173 -66749801 - ID_B1 SINE B4 -29 195 94 5 865 231 300 50 0 chr15 36745295 36745355 -66749619 + ID4_ SINE ID 7 69 -14 5 865 325 309 109 146 chr15 36745482 36745553 -66749421 - MLT1F LTR MaLR -336 212 170 5 865 979 216 58 19 chr15 36745553 36745761 -66749213 - B3 SINE B2 0 216 1 5 865 325 309 109 146 chr15 36745761 36745909 -66749065 - MLT1F LTR MaLR -379 169 1 5 865 403 307 123 42 chr15 36746286 36746619 -66748355 + L1ME2 LINE L1 5548 5907 -257 5 865 341 234 12 47 chr15 36746800 36746885 -66748089 + ID4 SINE ID 2 83 0 5 865 24 0 0 0 chr15 36746961 36746985 -66747989 + AT_rich Low_complexity Low_complexity 1 24 0 5 865 669 25 0 0 chr15 36746998 36747077 -66747897 + (TCTA)n Simple_repeat Simple_repeat 2 80 0 5 865 3279 39 7 47 chr15 36747077 36747504 -66747470 + RLTR10A LTR ERVK 2 411 0 5 865 443 281 91 0 chr15 36747520 36747641 -66747333 - RSINE1 SINE B4 -31 134 3 5 865 194 240 152 51 chr15 36749036 36749115 -66745859 - MIRm SINE MIR -56 152 66 5 865 578 323 6 30 chr15 36749320 36749489 -66745485 - RSINE1 SINE B4 0 165 1 5 865 453 244 102 0 chr15 36749489 36749616 -66745358 - B1F SINE Alu -3 146 7 5 865 272 216 0 0 chr15 36750518 36750569 -66744405 - tRNA-Ala-GCA tRNA tRNA -12 63 13 5 865 288 213 16 0 chr15 36750525 36750586 -66744388 - ID4 SINE ID -21 62 1 5 865 282 287 114 23 chr15 36750606 36750738 -66744236 - B1F SINE Alu -5 144 1 5 865 242 227 28 70 chr15 36750759 36750830 -66744144 - ID4_ SINE ID 0 83 16 5 865 261 264 0 0 chr15 36750860 36750913 -66744061 - B1F1 SINE Alu -88 61 9 5 865 2248 198 12 78 chr15 36750982 36751485 -66743489 + RMER19C LTR ERVK 138 607 -4 5 865 279 0 0 0 chr15 36752259 36752290 -66742684 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 865 29 47 0 0 chr15 36752365 36752408 -66742566 + AT_rich Low_complexity Low_complexity 1 43 0 5 865 955 133 28 0 chr15 36752774 36752917 -66742057 - B1_Mur3 SINE Alu -1 148 2 5 865 308 288 25 0 chr15 36753108 36753188 -66741786 - ID4 SINE ID 0 83 2 5 865 285 329 60 106 chr15 36753673 36753938 -66741036 + MTE2b LTR MaLR 110 362 -17 5 865 207 0 0 0 chr15 36753987 36754010 -66740964 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 5 865 1180 37 0 7 chr15 36754010 36754147 -66740827 - B1_Mm SINE Alu -10 137 2 5 865 334 214 71 0 chr15 36754169 36754239 -66740735 - PB1 SINE Alu -28 99 25 6 865 1124 97 0 14 chr15 36754631 36754778 -66740196 + B1_Mus1 SINE Alu 2 146 -2 6 865 23 0 0 0 chr15 36754908 36754931 -66740043 + AT_rich Low_complexity Low_complexity 1 23 0 6 865 261 119 0 0 chr15 36755847 36755889 -66739085 + (TCC)n Simple_repeat Simple_repeat 1 42 0 6 865 968 248 5 0 chr15 36755889 36756087 -66738887 - ID_B1 SINE B4 -3 221 23 6 865 261 0 0 0 chr15 36756090 36756119 -66738855 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 865 252 319 14 0 chr15 36756124 36756196 -66738778 - ID4 SINE ID -10 73 1 6 865 639 237 37 0 chr15 36756381 36756516 -66738458 - B1_Mur1 SINE Alu -2 147 8 6 865 247 315 58 77 chr15 36756516 36756528 -66738446 - MT2B2 LTR ERVL -274 259 159 6 865 606 279 42 47 chr15 36756959 36757151 -66737823 - MIR3 SINE MIR -3 205 15 6 865 186 133 0 0 chr15 36757779 36757809 -66737165 + (G)n Simple_repeat Simple_repeat 1 30 0 6 865 273 221 0 0 chr15 36758944 36759012 -66735962 + (CAT)n Simple_repeat Simple_repeat 3 70 0 6 865 817 208 0 7 chr15 36759013 36759163 -66735811 - B1_Mur1 SINE Alu 0 149 1 6 865 21 0 0 0 chr15 36759200 36759221 -66735753 + AT_rich Low_complexity Low_complexity 1 21 0 6 865 443 151 0 11 chr15 36759933 36760027 -66734947 + (CA)n Simple_repeat Simple_repeat 2 94 0 6 865 279 0 0 0 chr15 36760125 36760156 -66734818 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 865 1799 167 91 6 chr15 36760231 36760550 -66734424 + ORR1B1 LTR MaLR 41 386 -8 6 865 180 111 0 0 chr15 36760590 36760617 -66734357 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 6 865 1018 214 58 10 chr15 36761014 36761222 -66733752 + URR1A DNA MER1_type 9 226 0 6 865 200 59 29 0 chr15 36761697 36761731 -66733243 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 6 865 710 239 122 75 chr15 36761736 36761989 -66732985 + RMER15 LTR ERVL 296 560 -15 6 865 1285 14 7 0 chr15 36762542 36762687 -66732287 - B1_Mm SINE Alu 0 147 2 6 865 946 140 164 10 chr15 36762730 36762925 -66732049 + URR1B DNA MER1_type 1 225 0 6 865 528 306 41 115 chr15 36762948 36763313 -66731661 - ORR1E LTR MaLR -4 355 18 6 865 220 283 32 32 chr15 36763337 36763399 -66731575 - ID4 SINE ID -18 65 4 6 865 1720 215 50 73 chr15 36763471 36763696 -66731278 - MTD LTR MaLR 0 419 205 6 865 1181 50 0 0 chr15 36763696 36763835 -66731139 - B1_Mm SINE Alu -8 139 1 6 865 1720 215 50 73 chr15 36763835 36764005 -66730969 - MTD LTR MaLR -215 204 33 6 865 354 115 0 0 chr15 36764069 36764130 -66730844 + (A)n Simple_repeat Simple_repeat 1 61 0 6 865 276 297 49 33 chr15 36764130 36764252 -66730722 + L3 LINE CR1 3713 3836 -653 6 865 293 212 62 12 chr15 36764759 36764840 -66730134 + L3 LINE CR1 4112 4196 -293 6 865 396 0 0 0 chr15 36765647 36765691 -66729283 + (GA)n Simple_repeat Simple_repeat 2 45 0 6 865 937 330 27 17 chr15 36765791 36766090 -66728884 + MTE2b LTR MaLR 1 302 -77 6 865 380 258 86 62 chr15 36766849 36766977 -66727997 + MTEa LTR MaLR 249 379 0 6 865 2595 229 49 9 chr15 36767042 36767872 -66727102 + Lx5 LINE L1 6283 7037 -13 6 865 203 146 24 0 chr15 36767872 36767913 -66727061 + (ATG)n Simple_repeat Simple_repeat 3 44 0 6 865 248 227 0 83 chr15 36768330 36768402 -66726572 - ID2 SINE ID -13 70 5 6 865 535 173 27 18 chr15 36769080 36769192 -66725782 - B3 SINE B2 -103 113 1 6 865 564 281 7 0 chr15 36769225 36769360 -66725614 - B1_Mur1 SINE Alu -12 137 2 6 865 190 255 0 41 chr15 36769523 36769572 -66725402 - MER5B DNA MER1_type -109 69 23 6 865 260 298 24 12 chr15 36769665 36769750 -66725224 - MIRb SINE MIR -8 260 175 6 865 305 238 61 24 chr15 36771293 36771375 -66723599 - BC1_Mm scRNA scRNA -67 85 1 6 865 918 196 108 5 chr15 36773895 36774090 -66720884 + B3 SINE B2 2 216 0 6 865 24 32 0 0 chr15 36774171 36774202 -66720772 + AT_rich Low_complexity Low_complexity 1 31 0 6 865 323 311 67 18 chr15 36774983 36775147 -66719827 - L2a LINE L2 -2 3424 3253 6 865 237 65 0 0 chr15 36775178 36775209 -66719765 + (TATG)n Simple_repeat Simple_repeat 2 32 0 6 865 864 135 8 8 chr15 36775220 36775354 -66719620 - B1_Mur4 SINE Alu -1 149 16 6 865 446 257 13 77 chr15 36775354 36775376 -66719598 - ID_B1 SINE B4 -1 223 78 6 865 184 300 41 41 chr15 36775379 36775452 -66719522 - L2a LINE L2 -171 3255 3183 6 865 200 326 146 83 chr15 36776795 36776939 -66718035 - MIR SINE MIR 0 262 110 6 865 294 224 59 106 chr15 36778365 36778450 -66716524 - MT2B LTR ERVL -339 262 182 6 865 425 221 0 0 chr15 36778381 36778458 -66716516 - B1_Mur4 SINE Alu -63 87 11 6 865 835 185 101 6 chr15 36778519 36778698 -66716276 - B3 SINE B2 -6 210 15 6 865 218 183 14 0 chr15 36778715 36778786 -66716188 + (TG)n Simple_repeat Simple_repeat 2 73 0 6 865 640 273 28 28 chr15 36778793 36778974 -66716000 - B3A SINE B2 -16 182 2 6 865 705 280 24 63 chr15 36779806 36780012 -66714962 + B3A SINE B2 1 198 0 6 865 1146 219 0 0 chr15 36780079 36780289 -66714685 - B3 SINE B2 -6 210 1 6 865 245 203 47 0 chr15 36780398 36780462 -66714512 + (CA)n Simple_repeat Simple_repeat 2 68 0 6 865 414 0 0 0 chr15 36780473 36780519 -66714455 + (GA)n Simple_repeat Simple_repeat 2 47 0 6 865 374 20 40 0 chr15 36780703 36780753 -66714221 + (CATA)n Simple_repeat Simple_repeat 4 55 0 6 865 384 327 135 28 chr15 36780809 36781098 -66713876 + HAL1 LINE L1 868 1187 -1320 6 865 565 276 45 67 chr15 36781205 36781384 -66713590 + B3A SINE B2 2 176 -22 6 865 414 0 0 0 chr15 36781384 36781430 -66713544 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 865 233 231 18 0 chr15 36781716 36781785 -66713189 - L1MEf LINE L1 -3995 2247 2173 6 865 1031 187 101 5 chr15 36781792 36781980 -66712994 - B3 SINE B2 -6 210 5 6 865 298 231 0 0 chr15 36782330 36782405 -66712569 + B1F1 SINE Alu 1 75 -42 6 865 289 306 38 68 chr15 36782333 36782466 -66712508 + ID_B1 SINE B4 85 213 -11 6 865 1969 196 88 0 chr15 36782466 36782900 -66712074 - Lx9 LINE L1 -196 7448 6977 6 865 480 323 82 64 chr15 36782900 36783181 -66711793 + HAL1 LINE L1 2034 2319 -188 6 865 497 126 62 8 chr15 36783679 36783764 -66711210 + CT-rich Low_complexity Low_complexity 45 137 0 6 865 1195 39 11 38 chr15 36783764 36783949 -66711025 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 6 865 497 126 62 8 chr15 36783949 36783991 -66710983 + polypyrimidine Low_complexity Low_complexity 3 44 0 6 865 966 131 0 0 chr15 36784001 36784138 -66710836 - B1_Mur4 SINE Alu -1 149 13 6 865 435 237 78 97 chr15 36784002 36784156 -66710818 - B4 SINE B4 -69 223 73 6 865 227 103 0 25 chr15 36784351 36784391 -66710583 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 865 305 318 56 9 chr15 36784405 36784513 -66710461 + L1MCa LINE L1 1891 2003 -4505 6 865 278 175 0 0 chr15 36786212 36786252 -66708722 + B4 SINE B4 235 274 -18 6 865 234 0 0 0 chr15 36786323 36786349 -66708625 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 865 273 253 107 12 chr15 36786356 36786440 -66708534 + MLT1F1 LTR MaLR 70 161 -408 6 865 847 265 61 90 chr15 36786592 36786969 -66708005 - MTEa LTR MaLR -13 366 1 6 865 1528 166 29 25 chr15 36788482 36788760 -66706214 - RLTR17 LTR ERVK -413 279 1 6 865 1153 144 124 0 chr15 36788822 36789023 -66705951 - URR1A DNA MER1_type 0 226 1 6 865 212 133 104 62 chr15 36789215 36789263 -66705711 + B3A SINE B2 2 51 -147 6 865 3536 28 0 2 chr15 36789267 36789664 -66705310 - MTA_Mm LTR MaLR 0 396 1 6 865 2070 12 0 0 chr15 36789664 36789917 -66705057 - MTA_Mm-int LTR MaLR 0 1098 846 6 865 3614 32 5 0 chr15 36789924 36790367 -66704607 - MTA_Mm-int LTR MaLR -653 445 1 6 865 3522 30 0 2 chr15 36790367 36790764 -66704210 - MTA_Mm LTR MaLR 0 396 1 6 865 2213 190 20 3 chr15 36790931 36791322 -66703652 - MT2A LTR ERVL -41 492 95 6 865 343 189 61 82 chr15 36791292 36791390 -66703584 - MT2A LTR ERVL -374 159 64 6 865 239 269 20 79 chr15 36791326 36791427 -66703547 - MTE2b LTR MaLR -254 125 31 6 865 886 164 21 0 chr15 36791523 36791663 -66703311 - B1_Mur4 SINE Alu -7 143 1 6 865 348 207 0 0 chr15 36791963 36792074 -66702900 + (CA)n Simple_repeat Simple_repeat 2 112 0 6 865 254 316 100 20 chr15 36792098 36792198 -66702776 - LTR33B LTR ERVL -320 183 76 6 865 499 253 158 64 chr15 36792562 36792828 -66702146 - B4A SINE B4 0 292 2 6 865 558 0 0 0 chr15 36792854 36792916 -66702058 + (TA)n Simple_repeat Simple_repeat 2 63 0 6 865 387 60 0 0 chr15 36792918 36792968 -66702006 + (GA)n Simple_repeat Simple_repeat 2 51 0 6 865 551 296 97 49 chr15 36793272 36793560 -66701414 - Lx8 LINE L1 -2 7471 7170 6 865 297 265 169 11 chr15 36793573 36793675 -66701299 + MLT1J LTR MaLR 42 185 -327 6 865 952 296 92 28 chr15 36794341 36794362 -66700612 - L1MB5 LINE L1 -10 6164 6144 6 865 222 91 0 0 chr15 36794367 36794400 -66700574 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 865 468 236 27 36 chr15 36794400 36794504 -66700470 - PB1D7 SINE Alu -16 104 1 6 865 952 296 92 28 chr15 36794504 36794948 -66700026 - L1MB5 LINE L1 -31 6143 5670 6 865 2064 149 11 49 chr15 36795777 36796145 -66698829 - ORR1B1 LTR MaLR 0 394 41 6 865 414 0 0 0 chr15 36796256 36796302 -66698672 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 865 507 151 0 0 chr15 36796334 36796460 -66698514 + CT-rich Low_complexity Low_complexity 2 127 0 6 865 801 136 0 0 chr15 36796463 36796640 -66698334 + (TC)n Simple_repeat Simple_repeat 2 178 0 6 865 483 18 0 0 chr15 36796663 36796719 -66698255 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 865 317 288 26 18 chr15 36797555 36797668 -66697306 + MIRc SINE MIR 35 148 -120 6 865 232 365 66 57 chr15 36798601 36798723 -66696251 - B4A SINE B4 -168 124 2 6 865 931 246 120 55 chr15 36798724 36799075 -66695899 + MTE2b LTR MaLR 4 370 0 7 865 258 293 169 22 chr15 36800579 36800757 -66694217 + L2b LINE L2 2673 2876 -543 7 865 395 281 0 19 chr15 36800832 36800937 -66694037 - B4A SINE B4 -4 288 186 7 865 201 345 58 33 chr15 36801287 36801407 -66693567 + L2b LINE L2 3159 3281 -94 7 865 331 333 30 0 chr15 36802103 36802202 -66692772 + BC1_Mm scRNA scRNA 1 102 -50 7 865 858 146 13 53 chr15 36802301 36802453 -66692521 + B1_Mur2 SINE Alu 3 148 -1 7 865 248 242 152 0 chr15 36802805 36802871 -66692103 + ID4 SINE ID 2 77 -6 7 865 235 236 152 102 chr15 36804963 36805081 -66689893 + RLTR12B LTR ERVK 11 134 -394 7 865 534 289 194 11 chr15 36805138 36805401 -66689573 + MLT1F LTR MaLR 238 548 0 7 865 207 238 43 100 chr15 36805973 36806043 -66688931 + L2c LINE L2 3263 3328 -59 7 865 510 57 0 0 chr15 36806306 36806376 -66688598 + (TC)n Simple_repeat Simple_repeat 1 70 0 7 865 207 185 19 58 chr15 36806465 36806620 -66688354 + (TATG)n Simple_repeat Simple_repeat 1 149 0 7 865 391 260 6 6 chr15 36809014 36809192 -66685782 + (CA)n Simple_repeat Simple_repeat 2 179 0 7 865 282 279 19 0 chr15 36809247 36809405 -66685569 + (CA)n Simple_repeat Simple_repeat 1 161 0 7 865 234 297 112 36 chr15 36809618 36809779 -66685195 - L2a LINE L2 -282 3144 2965 7 865 424 312 57 43 chr15 36809941 36810152 -66684822 + L1MC LINE L1 5287 5500 -2382 7 865 252 194 95 16 chr15 36810161 36810224 -66684750 + L1M5 LINE L1 5533 5600 -594 7 865 258 32 0 0 chr15 36810736 36810767 -66684207 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 7 865 216 259 0 17 chr15 36810947 36811006 -66683968 + C-rich Low_complexity Low_complexity 3 60 0 7 865 1227 54 0 26 chr15 36811255 36811407 -66683567 + B1_Mus1 SINE Alu 1 148 0 7 865 569 226 70 39 chr15 36811639 36811652 -66683322 - RSINE1 SINE B4 -31 134 125 7 865 521 105 0 11 chr15 36811652 36811739 -66683235 + (TG)n Simple_repeat Simple_repeat 2 87 0 7 865 569 226 70 39 chr15 36811739 36811854 -66683120 - RSINE1 SINE B4 -41 124 2 7 865 309 250 29 48 chr15 36811872 36811977 -66682997 + ID_B1 SINE B4 71 173 -51 7 865 421 221 28 46 chr15 36811885 36811994 -66682980 + PB1D10 SINE Alu 6 112 -5 7 865 282 143 0 0 chr15 36812114 36812163 -66682811 + (GGGA)n Simple_repeat Simple_repeat 3 51 0 7 865 550 300 23 0 chr15 36812193 36812323 -66682651 + RSINE1 SINE B4 3 135 -30 7 865 427 302 29 79 chr15 36812586 36812726 -66682248 - B4A SINE B4 -36 256 124 7 865 715 195 8 0 chr15 36812754 36812882 -66682092 - B1_Mur3 SINE Alu -16 133 5 7 865 328 319 35 48 chr15 36812885 36813030 -66681944 - B4A SINE B4 -139 153 11 7 865 312 326 122 98 chr15 36813360 36813564 -66681410 + MER3 DNA MER1_type 1 209 0 7 865 1566 192 81 20 chr15 36813640 36813985 -66680989 - MTD LTR MaLR -46 373 8 7 865 318 227 13 51 chr15 36814009 36814088 -66680886 - ID_B1 SINE B4 -4 220 145 7 865 229 227 186 57 chr15 36814120 36814190 -66680784 - ID_B1 SINE B4 -65 159 81 7 865 234 0 0 0 chr15 36814285 36814311 -66680663 + (TTG)n Simple_repeat Simple_repeat 2 27 0 7 865 288 0 0 0 chr15 36814459 36814491 -66680483 + (TTTTA)n Simple_repeat Simple_repeat 3 34 0 7 865 358 228 148 0 chr15 36815550 36815651 -66679323 + ID_B1 SINE B4 4 119 -105 7 865 240 35 0 0 chr15 36816362 36816391 -66678583 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 865 24 0 0 0 chr15 36816452 36816476 -66678498 + AT_rich Low_complexity Low_complexity 1 24 0 7 865 259 58 57 19 chr15 36816524 36816577 -66678397 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 7 865 213 219 54 14 chr15 36816641 36816715 -66678259 + A-rich Low_complexity Low_complexity 4 80 0 7 865 1417 63 32 5 chr15 36816850 36817040 -66677934 + B2_Mm2 SINE B2 1 195 0 7 865 1167 220 167 108 chr15 36817425 36817516 -66677458 - RLTR20C LTR ERVK 0 534 444 7 865 789 72 61 0 chr15 36817516 36817799 -66677175 + (CA)n Simple_repeat Simple_repeat 1 300 0 7 865 1167 220 167 108 chr15 36817799 36817878 -66677096 - RLTR20C LTR ERVK -91 443 403 7 865 1709 53 0 0 chr15 36817878 36818086 -66676888 - L1Md_T LINE L1 0 6582 6375 7 865 1167 189 101 83 chr15 36818086 36818431 -66676543 - RLTR20C LTR ERVK -132 402 5 7 865 214 256 92 58 chr15 36818547 36818634 -66676340 + ID_B1 SINE B4 42 131 -93 7 865 371 227 42 83 chr15 36819135 36819231 -66675743 + B4A SINE B4 141 232 -60 7 865 210 91 0 0 chr15 36819262 36819295 -66675679 + (TAA)n Simple_repeat Simple_repeat 2 34 0 7 865 186 107 0 0 chr15 36819461 36819489 -66675485 + MIR SINE MIR 21 48 -214 7 865 387 60 0 0 chr15 36820838 36820888 -66674086 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 865 222 62 0 0 chr15 36821249 36821281 -66673693 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 7 865 328 67 0 32 chr15 36822170 36822232 -66672742 + (CAAA)n Simple_repeat Simple_repeat 2 61 0 7 865 22 0 0 0 chr15 36823076 36823098 -66671876 + AT_rich Low_complexity Low_complexity 1 22 0 7 865 603 330 10 81 chr15 36823148 36823346 -66671628 - B4A SINE B4 -4 288 105 7 865 242 290 137 52 chr15 36823369 36823602 -66671372 - L1MB2 LINE L1 -43 6128 5876 7 865 22 0 0 0 chr15 36823962 36823984 -66670990 + AT_rich Low_complexity Low_complexity 1 22 0 7 865 1342 74 11 11 chr15 36824373 36824550 -66670424 + B2_Mm2 SINE B2 3 179 -16 7 865 450 0 0 0 chr15 36824550 36824600 -66670374 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 865 342 296 19 118 chr15 36824698 36824859 -66670115 + B1F2 SINE Alu 4 148 -1 7 865 426 254 123 0 chr15 36824960 36825082 -66669892 + MLT1A1 LTR MaLR 268 404 -4 7 865 374 252 88 53 chr15 36825958 36826071 -66668903 - PB1D10 SINE Alu 0 117 1 7 865 620 219 84 0 chr15 36826071 36826099 -66668875 - ID_B1 SINE B4 -133 91 54 7 865 247 250 82 52 chr15 36826603 36826700 -66668274 + MLT1F1 LTR MaLR 361 460 -109 7 865 449 257 41 62 chr15 36826851 36826996 -66667978 + ORR1E LTR MaLR 14 155 -204 7 865 3469 180 81 5 chr15 36827028 36827658 -66667316 - RLTR33 LTR ERVK 0 678 1 7 866 396 117 0 0 chr15 36831965 36832042 -66662932 + (TC)n Simple_repeat Simple_repeat 1 77 0 7 866 180 0 0 0 chr15 36832042 36832062 -66662912 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 866 1123 256 24 65 chr15 36832106 36832171 -66662803 - B4 SINE B4 -4 288 224 7 866 441 0 0 0 chr15 36832171 36832220 -66662754 + (TTG)n Simple_repeat Simple_repeat 2 50 0 7 866 1123 256 24 65 chr15 36832220 36832446 -66662528 - B4 SINE B4 -69 223 11 7 866 349 283 163 53 chr15 36832571 36832761 -66662213 + MIRb SINE MIR 58 268 0 7 866 357 257 0 0 chr15 36833453 36833523 -66661451 - B1F SINE Alu -7 142 73 7 866 241 345 0 67 chr15 36833523 36833543 -66661431 - ID_B1 SINE B4 -7 217 134 7 866 329 239 191 21 chr15 36833564 36833658 -66661316 - B3A SINE B2 -61 137 28 7 866 263 236 18 0 chr15 36833660 36833715 -66661259 + CT-rich Low_complexity Low_complexity 5 60 0 7 866 629 212 9 0 chr15 36833715 36833828 -66661146 - B1_Mur1 SINE Alu -33 116 3 7 866 332 252 17 108 chr15 36833727 36833847 -66661127 - MT2B LTR ERVL -344 257 149 7 866 708 252 183 118 chr15 36834117 36834473 -66660501 - MTD LTR MaLR 0 379 1 7 866 399 306 217 52 chr15 36834497 36834977 -66659997 + HAL1 LINE L1 1169 1727 -780 7 866 623 143 116 0 chr15 36834980 36835105 -66659869 + B1_Mur1 SINE Alu 1 149 0 7 866 348 285 7 110 chr15 36835546 36835700 -66659274 + B1F SINE Alu 9 146 -3 7 866 977 32 0 16 chr15 36836136 36836262 -66658712 + (TTCTCC)n Simple_repeat Simple_repeat 3 126 0 7 866 244 73 0 24 chr15 36836262 36836304 -66658670 - B2_Mm2 SINE B2 -16 179 139 7 866 312 161 3 32 chr15 36836295 36836358 -66658616 - B2_Mm2 SINE B2 -107 109 48 7 866 1246 96 11 33 chr15 36836385 36836568 -66658406 - B2_Mm1t SINE B2 -14 179 1 7 866 249 263 79 0 chr15 36836776 36836852 -66658122 + ID4_ SINE ID 2 83 0 7 866 321 323 97 14 chr15 36837173 36837365 -66657609 + MLT1F2 LTR MaLR 328 538 -31 7 866 240 326 122 31 chr15 36837374 36837472 -66657502 + PB1D10 SINE Alu 1 107 -10 7 866 351 60 0 0 chr15 36837676 36837726 -66657248 + (GTTTG)n Simple_repeat Simple_repeat 5 54 0 7 866 855 169 108 31 chr15 36837733 36837858 -66657116 + URR1B DNA MER1_type 16 161 -64 7 866 2147 159 2 66 chr15 36837858 36838283 -66656691 - RMER10B LTR ERVL 0 398 1 7 866 855 169 108 31 chr15 36838283 36838352 -66656622 + URR1B DNA MER1_type 162 225 0 7 866 380 266 110 0 chr15 36838921 36839030 -66655944 + MLT2B4 LTR ERVL 18 138 -418 7 866 186 368 0 14 chr15 36839289 36839358 -66655616 - MIR SINE MIR -82 180 113 7 866 435 68 0 0 chr15 36839586 36839645 -66655329 + (TATG)n Simple_repeat Simple_repeat 2 60 0 7 866 701 230 7 0 chr15 36839646 36839781 -66655193 - B1_Mur4 SINE Alu -9 141 6 7 866 811 178 115 11 chr15 36839847 36840029 -66654945 - B3 SINE B2 -4 212 12 7 866 422 235 126 10 chr15 36841559 36841662 -66653312 + B1F1 SINE Alu 14 128 -21 7 866 1158 243 89 64 chr15 36842197 36842602 -66652372 + MTD LTR MaLR 5 419 0 7 866 1493 175 37 26 chr15 36843486 36843756 -66651218 - ORR1D1 LTR MaLR -101 273 1 7 866 313 314 223 24 chr15 36844983 36845234 -66649740 - ORR1D2 LTR MaLR -69 301 1 7 866 739 244 34 17 chr15 36845293 36845472 -66649502 - B3A SINE B2 -15 183 2 7 866 705 126 0 0 chr15 36845497 36845608 -66649366 + (GGAA)n Simple_repeat Simple_repeat 3 113 0 7 866 720 326 31 13 chr15 36845758 36845982 -66648992 + Tigger7 DNA MER2_type 3 230 -2261 7 866 745 313 111 24 chr15 36846007 36846341 -66648633 + Tigger7 DNA MER2_type 2129 2491 0 7 866 180 385 21 10 chr15 36846994 36847091 -66647883 + MIRb SINE MIR 165 262 -6 7 866 564 251 111 77 chr15 36847422 36847629 -66647345 + B3 SINE B2 3 216 0 7 866 265 258 137 56 chr15 36848558 36848755 -66646219 - L2 LINE L2 -369 3050 2838 7 866 278 325 154 23 chr15 36848762 36848976 -66645998 - L2 LINE L2 -699 2720 2479 7 866 937 275 137 33 chr15 36849093 36849428 -66645546 - MTEa LTR MaLR 0 379 10 8 866 225 294 224 40 chr15 36849443 36849765 -66645209 - L2 LINE L2 -1113 2306 1926 7 866 198 296 28 84 chr15 36849803 36849910 -66645064 - L2 LINE L2 -1608 1811 1711 7 866 370 313 50 71 chr15 36849959 36850100 -66644874 + B1F1 SINE Alu 1 138 -11 8 866 309 169 26 78 chr15 36850142 36850168 -66644806 + HAL1-3A_ME LINE L1 1955 1976 -882 8 866 914 263 45 31 chr15 36850168 36850455 -66644519 + B4 SINE B4 2 292 0 8 866 309 169 26 78 chr15 36850455 36850505 -66644469 + HAL1-3A_ME LINE L1 1977 2027 -831 8 866 180 217 0 0 chr15 36850519 36850565 -66644409 + (CA)n Simple_repeat Simple_repeat 1 46 0 8 866 330 95 0 0 chr15 36850570 36850612 -66644362 + HAL1-3A_ME LINE L1 1976 2017 -841 8 866 205 182 0 35 chr15 36851031 36851088 -66643886 + C-rich Low_complexity Low_complexity 2 56 0 8 866 875 204 204 69 chr15 36851624 36851898 -66643076 + MTEa LTR MaLR 67 377 -2 8 866 315 0 0 0 chr15 36852241 36852276 -66642698 + (CA)n Simple_repeat Simple_repeat 1 35 0 8 866 257 273 78 0 chr15 36853500 36853577 -66641397 + MLT1A0 LTR MaLR 40 122 -243 8 866 231 279 149 20 chr15 36853978 36854179 -66640795 + L2 LINE L2 2369 2595 -824 8 866 24 0 0 0 chr15 36854304 36854328 -66640646 + AT_rich Low_complexity Low_complexity 1 24 0 8 866 237 330 0 11 chr15 36854716 36854805 -66640169 + C-rich Low_complexity Low_complexity 2 89 0 8 866 851 333 56 42 chr15 36854805 36855254 -66639720 + MT2A LTR ERVL 1 455 -78 8 866 621 180 90 38 chr15 36855729 36855862 -66639112 + B1F SINE Alu 7 146 -3 8 866 264 77 0 0 chr15 36855870 36855909 -66639065 + (GA)n Simple_repeat Simple_repeat 1 39 0 8 866 651 266 12 25 chr15 36855916 36856078 -66638896 + RSINE1 SINE B4 2 161 -4 8 866 301 348 85 9 chr15 36856253 36856476 -66638498 - L1MC LINE L1 -2148 5734 5495 8 866 403 269 48 0 chr15 36856480 36856584 -66638390 - PB1D10 SINE Alu -1 116 8 8 866 226 290 9 115 chr15 36856491 36856604 -66638370 - MT2B LTR ERVL -343 258 158 8 866 403 255 68 10 chr15 36856634 36856737 -66638237 + PB1D7 SINE Alu 12 120 0 8 866 457 296 80 41 chr15 36857609 36857975 -66636999 + MLT1C LTR MaLR 9 465 -2 8 866 201 39 0 0 chr15 36858673 36858699 -66636275 + (TTAG)n Simple_repeat Simple_repeat 3 28 0 8 866 294 365 0 0 chr15 36859041 36859448 -66635526 + C-rich Low_complexity Low_complexity 1 407 0 8 866 305 351 0 0 chr15 36859508 36859682 -66635292 + C-rich Low_complexity Low_complexity 3 176 0 8 866 898 244 84 4 chr15 36860416 36860673 -66634301 - MTEa LTR MaLR -110 269 1 8 866 1586 158 129 25 chr15 36861287 36861515 -66633459 + ORR1B2 LTR MaLR 1 263 -104 8 866 1829 77 73 189 chr15 36861515 36861657 -66633317 + ORR1A2 LTR MaLR 1 87 -240 8 866 1090 60 0 22 chr15 36861657 36861794 -66633180 - B1_Mm SINE Alu -13 134 1 8 866 1829 77 73 189 chr15 36861794 36862021 -66632953 + ORR1A2 LTR MaLR 88 327 0 8 866 1586 158 129 25 chr15 36862021 36862117 -66632857 + ORR1B2 LTR MaLR 264 359 -8 8 866 180 290 68 97 chr15 36862639 36862742 -66632232 + MER5B DNA MER1_type 15 114 -64 8 866 3072 155 18 21 chr15 36862895 36863410 -66631564 - RMER20A LTR ERVK -3 513 1 8 866 270 339 48 48 chr15 36864709 36864833 -66630141 - MLT1A0 LTR MaLR -80 285 162 8 866 821 59 0 0 chr15 36864898 36865000 -66629974 - B1_Mus1 SINE Alu -11 137 36 8 866 286 209 100 44 chr15 36864930 36865020 -66629954 - RLTR25B LTR ERVK -519 509 415 8 866 185 35 0 65 chr15 36865056 36865087 -66629887 + (CCCCCT)n Simple_repeat Simple_repeat 2 30 0 8 866 364 239 0 22 chr15 36865130 36865220 -66629754 - MLT1A1 LTR MaLR 0 408 321 8 866 432 240 95 107 chr15 36865203 36865220 -66629754 - CYRA11_Mm Unknown Y-chromosome -213 404 284 8 866 1044 165 52 57 chr15 36865220 36865432 -66629542 + URR1A DNA MER1_type 1 211 -15 8 866 432 240 95 107 chr15 36865432 36865446 -66629528 - CYRA11_Mm Unknown Y-chromosome -213 283 165 8 866 279 297 76 143 chr15 36865505 36865729 -66629245 - MLT1A1 LTR MaLR -194 214 6 8 866 278 293 34 41 chr15 36865768 36865914 -66629060 + Charlie12 DNA MER1_type 34 178 -2695 8 866 1073 124 137 20 chr15 36866073 36866270 -66628704 - URR1B DNA MER1_type -1 224 5 8 866 276 311 135 10 chr15 36867200 36867304 -66627670 - MIR SINE MIR -139 137 21 8 866 180 0 0 0 chr15 36867489 36867509 -66627465 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 866 214 234 0 0 chr15 36868643 36868690 -66626284 + C-rich Low_complexity Low_complexity 1 47 0 8 866 270 81 0 0 chr15 36868998 36869035 -66625939 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 8 866 310 301 67 41 chr15 36869369 36869575 -66625399 + MIRb SINE MIR 6 231 -37 8 866 22 0 0 0 chr15 36870378 36870400 -66624574 + AT_rich Low_complexity Low_complexity 1 22 0 8 866 1199 62 0 0 chr15 36870400 36870546 -66624428 - B1_Mus2 SINE Alu 0 147 2 8 866 1645 166 102 111 chr15 36870547 36870613 -66624361 + MTC LTR MaLR 13 79 -342 8 866 1127 77 21 0 chr15 36870613 36870756 -66624218 + B1_Mus2 SINE Alu 1 146 -1 8 866 1645 166 102 111 chr15 36870756 36871039 -66623935 + MTC LTR MaLR 80 361 -60 8 866 2678 100 24 0 chr15 36871039 36871419 -66623555 - ORR1B1 LTR MaLR -1 393 5 8 866 1645 166 102 111 chr15 36871419 36871481 -66623493 + MTC LTR MaLR 362 421 0 8 866 249 366 40 0 chr15 36872284 36872385 -66622589 + MLT1H LTR MaLR 427 531 -18 8 866 242 299 78 59 chr15 36872613 36872766 -66622208 + MIRc SINE MIR 67 222 -46 8 866 1020 261 39 49 chr15 36873980 36874266 -66620708 - B4 SINE B4 0 292 10 8 866 251 233 16 16 chr15 36874500 36874561 -66620413 + PB1D9 SINE Alu 60 120 0 8 866 268 308 85 84 chr15 36874771 36874961 -66620013 - MIR SINE MIR -27 241 45 8 866 298 283 131 77 chr15 36874935 36875065 -66619909 + MIRb SINE MIR 13 149 -119 8 866 246 340 151 44 chr15 36875040 36875563 -66619411 + L2a LINE L2 2200 2778 -641 8 866 390 277 138 69 chr15 36875598 36875858 -66619116 + B4 SINE B4 2 279 -13 8 866 548 172 28 11 chr15 36875911 36876087 -66618887 + (CA)n Simple_repeat Simple_repeat 2 180 0 8 866 298 173 27 0 chr15 36876111 36876186 -66618788 + (CA)n Simple_repeat Simple_repeat 2 78 0 8 866 215 291 155 26 chr15 36876588 36876743 -66618231 + L2a LINE L2 3228 3402 -24 8 866 436 342 86 50 chr15 36876792 36877176 -66617798 + L1ME3B LINE L1 5571 5968 -272 8 866 207 0 0 0 chr15 36877220 36877243 -66617731 + (T)n Simple_repeat Simple_repeat 1 23 0 8 866 279 0 0 0 chr15 36878241 36878272 -66616702 + (TC)n Simple_repeat Simple_repeat 2 32 0 8 866 283 330 71 0 chr15 36879637 36879749 -66615225 + PB1 SINE Alu 5 124 -3 8 866 3459 41 0 128 chr15 36880726 36881226 -66613748 - RLTR10C LTR ERVK 0 436 1 8 866 365 232 101 59 chr15 36881314 36881433 -66613541 + RSINE1 SINE B4 3 126 -39 8 866 417 20 0 0 chr15 36881434 36881484 -66613490 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 866 27 49 0 0 chr15 36881484 36881525 -66613449 + AT_rich Low_complexity Low_complexity 1 41 0 8 866 589 290 40 20 chr15 36881525 36881673 -66613301 - RSINE1 SINE B4 -2 163 13 8 866 1260 236 81 28 chr15 36881691 36882048 -66612926 + MTE2b LTR MaLR 1 376 -3 8 866 194 320 106 22 chr15 36882196 36882375 -66612599 - L2c LINE L2 -14 3373 3180 8 866 279 262 48 97 chr15 36882654 36882840 -66612134 - L1M6 LINE L1 -5399 1097 921 8 866 1229 160 46 19 chr15 36883071 36883287 -66611687 - URR1B DNA MER1_type -2 223 2 8 866 186 43 0 0 chr15 36883308 36883331 -66611643 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 8 866 989 221 17 0 chr15 36883482 36883663 -66611311 + B3 SINE B2 25 208 -8 8 866 886 96 0 0 chr15 36883661 36883776 -66611198 - B1_Mus2 SINE Alu -31 116 2 8 866 808 108 123 0 chr15 36883831 36883961 -66611013 - URR1A DNA MER1_type 0 226 81 8 866 1248 67 0 0 chr15 36884107 36884287 -66610687 + (TCC)n Simple_repeat Simple_repeat 1 180 0 8 866 443 208 120 19 chr15 36884961 36885069 -66609905 + PB1D9 SINE Alu 1 119 -1 8 866 3568 140 40 55 chr15 36885089 36885741 -66609233 - RLTR26 LTR ERVK 0 642 1 8 866 675 258 133 106 chr15 36885837 36886197 -66608777 + ORR1D2 LTR MaLR 1 370 0 8 866 2216 153 58 6 chr15 36886563 36886924 -66608050 - MTC LTR MaLR -37 384 5 8 866 1397 158 88 7 chr15 36886977 36887268 -66607706 - ORR1B2 LTR MaLR 0 384 71 8 866 313 279 82 59 chr15 36887646 36887868 -66607106 + RLTR41 LTR ERV1 194 457 -50 8 866 690 191 23 15 chr15 36887867 36888000 -66606974 - ORR1B2 LTR MaLR -232 135 2 8 866 240 0 24 48 chr15 36888341 36888383 -66606591 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 8 866 493 273 39 15 chr15 36889114 36889244 -66605730 + Charlie9 DNA MER1_type 2 134 -2623 8 866 376 375 35 25 chr15 36889315 36889512 -66605462 - MLT1L LTR MaLR -6 604 406 8 866 273 29 0 0 chr15 36889675 36889709 -66605265 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 866 396 0 0 0 chr15 36890539 36890583 -66604391 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 866 180 0 0 0 chr15 36891049 36891069 -66603905 + (T)n Simple_repeat Simple_repeat 1 20 0 8 866 1304 20 0 0 chr15 36891069 36891216 -66603758 - B1_Mus2 SINE Alu 0 147 1 8 866 242 211 180 18 chr15 36891437 36891548 -66603426 - MIRb SINE MIR -6 262 134 8 866 800 214 13 42 chr15 36891558 36891727 -66603247 + RSINE1 SINE B4 6 165 0 8 866 6918 61 29 1 chr15 36891878 36892747 -66602227 - RLTR13B1 LTR ERVK 0 893 1 8 866 247 327 101 29 chr15 36893048 36893256 -66601718 + L2a LINE L2 3135 3357 -69 8 866 330 263 83 10 chr15 36893369 36893465 -66601509 - MIRm SINE MIR 0 276 174 8 866 468 105 0 0 chr15 36893629 36893705 -66601269 + (GGGA)n Simple_repeat Simple_repeat 1 76 0 8 866 182 265 76 98 chr15 36893776 36893868 -66601106 - L2 LINE L2 -853 2566 2477 8 866 2321 115 73 11 chr15 36893919 36894288 -66600686 - ORR1B1 LTR MaLR -2 392 1 8 866 404 140 0 41 chr15 36894331 36894428 -66600546 + (TG)n Simple_repeat Simple_repeat 1 93 0 8 866 421 314 90 11 chr15 36895078 36895255 -66599719 - ORR1E LTR MaLR -168 191 1 8 866 608 308 145 94 chr15 36895443 36895860 -66599114 + MLT1J LTR MaLR 32 478 -34 8 866 1170 81 0 0 chr15 36895860 36896008 -66598966 - B1_Mus1 SINE Alu 0 148 1 9 866 608 308 145 94 chr15 36896008 36896046 -66598928 + MLT1J LTR MaLR 479 510 -2 8 866 221 227 23 0 chr15 36898171 36898215 -66596759 + C-rich Low_complexity Low_complexity 2 46 0 9 866 340 311 118 0 chr15 36898220 36898381 -66596593 - HAL1-3A_ME LINE L1 -427 2431 2252 9 866 956 227 32 0 chr15 36899666 36899851 -66595123 - B3 SINE B2 -2 214 24 9 866 300 211 165 11 chr15 36900433 36900541 -66594433 + B1F2 SINE Alu 1 115 -2 9 866 413 278 163 58 chr15 36901520 36901845 -66593129 - ORR1E LTR MaLR 0 359 1 9 866 209 163 0 44 chr15 36901993 36902005 -66592969 + polypyrimidine Low_complexity Low_complexity 33 43 0 9 866 1021 131 11 0 chr15 36902005 36902181 -66592793 + (TTC)n Simple_repeat Simple_repeat 3 180 0 9 866 209 163 0 44 chr15 36902181 36902213 -66592761 + polypyrimidine Low_complexity Low_complexity 1 32 0 9 866 253 254 136 76 chr15 36902386 36902518 -66592456 + MIRb SINE MIR 106 245 -23 9 866 320 331 57 25 chr15 36903613 36903771 -66591203 + MLT1J LTR MaLR 72 234 -278 9 866 491 305 40 0 chr15 36903912 36904063 -66590911 + RSINE1 SINE B4 5 161 -4 9 866 612 0 0 0 chr15 36904069 36904137 -66590837 + (TTTTC)n Simple_repeat Simple_repeat 2 69 0 9 866 407 271 30 4 chr15 36904207 36904322 -66590652 + PB1D10 SINE Alu 18 137 -12 9 866 183 315 144 21 chr15 36904909 36905097 -66589877 + L3 LINE CR1 3671 3881 -608 9 866 255 226 38 0 chr15 36905288 36905341 -66589633 + B1_Mur4 SINE Alu 2 56 -94 9 866 555 108 85 11 chr15 36905399 36905493 -66589481 + B1_Mur3 SINE Alu 42 142 -7 9 866 551 245 0 9 chr15 36907044 36907151 -66587823 + B1F SINE Alu 41 146 -3 9 866 585 76 0 0 chr15 36907169 36907248 -66587726 + (GGAA)n Simple_repeat Simple_repeat 3 81 0 9 866 214 278 143 10 chr15 36907390 36907488 -66587486 + MIRb SINE MIR 5 115 -153 9 866 673 48 0 0 chr15 36908088 36908172 -66586802 - B1_Mus2 SINE Alu 0 147 64 9 866 252 0 0 0 chr15 36908317 36908345 -66586629 + (TA)n Simple_repeat Simple_repeat 2 29 0 9 866 303 226 9 114 chr15 36908345 36908358 -66586616 - BC1_Mm scRNA scRNA -44 108 96 9 866 930 228 48 0 chr15 36908358 36908564 -66586410 - B3 SINE B2 0 216 1 9 866 319 226 10 108 chr15 36908564 36908661 -66586313 - ID4 SINE ID -57 95 9 9 866 912 205 92 0 chr15 36910345 36910540 -66584434 + B3 SINE B2 1 213 -3 9 866 368 351 43 9 chr15 36911391 36911506 -66583468 - ID_B1 SINE B4 -24 200 82 9 866 417 300 89 48 chr15 36911880 36912048 -66582926 - MER5B DNA MER1_type -1 177 3 9 866 226 175 228 0 chr15 36912094 36912151 -66582823 - ID4_ SINE ID -13 70 1 9 866 229 279 55 47 chr15 36912489 36912617 -66582357 - L3 LINE CR1 -1964 2525 2397 9 866 224 224 212 53 chr15 36912795 36912908 -66582066 - L3 LINE CR1 -2250 2239 2109 9 866 225 343 59 15 chr15 36914033 36914169 -66580805 + L2 LINE L2 2240 2381 -1038 9 866 245 323 58 36 chr15 36914399 36914537 -66580437 + L2 LINE L2 2698 2838 -581 9 866 592 149 8 102 chr15 36916236 36916363 -66578611 - B1_Mus2 SINE Alu -2 145 31 9 866 726 221 202 6 chr15 36916377 36916550 -66578424 - B3 SINE B2 -6 210 4 9 866 443 225 135 0 chr15 36918182 36918293 -66576681 - RSINE1 SINE B4 -35 130 5 9 866 548 212 110 0 chr15 36918545 36918663 -66576311 - B1_Mur3 SINE Alu -17 132 2 9 866 722 201 189 0 chr15 36920130 36920299 -66574675 - B3 SINE B2 -12 204 4 9 866 732 305 183 21 chr15 36920515 36921028 -66573946 + Lx8 LINE L1 6859 7454 -19 9 866 352 299 104 47 chr15 36921521 36921732 -66573242 - L3 LINE CR1 -587 3902 3680 9 866 401 272 30 54 chr15 36922529 36922696 -66572278 - RSINE1 SINE B4 0 165 3 9 866 444 19 0 0 chr15 36923183 36923236 -66571738 + (CA)n Simple_repeat Simple_repeat 1 53 0 9 866 290 273 102 0 chr15 36923311 36923399 -66571575 + PB1D10 SINE Alu 13 109 -8 9 866 430 190 271 17 chr15 36924206 36924324 -66570650 - B1_Mur4 SINE Alu 0 150 3 9 866 1096 78 0 0 chr15 36924847 36924989 -66569985 - B1_Mus1 SINE Alu -6 142 1 9 866 3104 6 10 55 chr15 36925320 36925704 -66569270 - IAPLTR1_Mm LTR ERVK 0 367 1 9 866 6001 25 3 10 chr15 36925704 36926395 -66568579 - IAPEz-int LTR ERVK 0 6481 5796 9 866 1088 143 16 26 chr15 36926399 36926593 -66568381 - MMERVK10C-int LTR ERVK -7323 258 67 9 866 1050 86 159 0 chr15 36926564 36926727 -66568247 - IAPEz-int LTR ERVK -6285 196 8 9 866 3162 6 5 54 chr15 36926727 36927113 -66567861 - IAPLTR1_Mm LTR ERVK 0 367 1 9 866 281 216 194 10 chr15 36927461 36927559 -66567415 + PB1D10 SINE Alu 2 117 0 9 866 216 222 21 43 chr15 36927899 36927946 -66567028 - B1F SINE Alu -17 132 87 9 866 539 178 28 18 chr15 36928295 36928404 -66566570 + PB1D9 SINE Alu 10 119 -1 9 866 306 0 0 0 chr15 36930771 36930805 -66564169 + (GGAA)n Simple_repeat Simple_repeat 4 37 0 9 866 201 74 0 0 chr15 36931149 36931176 -66563798 + (A)n Simple_repeat Simple_repeat 1 27 0 9 866 1531 33 44 0 chr15 36931368 36931550 -66563424 + B2_Mm1a SINE B2 2 191 -2 9 866 24 0 0 0 chr15 36931551 36931575 -66563399 + AT_rich Low_complexity Low_complexity 1 24 0 9 866 472 309 232 21 chr15 36932139 36932380 -66562594 + B4A SINE B4 1 292 0 9 866 264 363 97 10 chr15 36932790 36932985 -66561989 + MIR SINE MIR 31 242 -20 9 866 666 224 13 13 chr15 36933916 36934065 -66560909 + B1_Mur1 SINE Alu 1 149 0 9 866 264 287 119 28 chr15 36934117 36934277 -66560697 + L1ME3B LINE L1 5922 6166 -74 9 866 431 247 0 0 chr15 36934748 36934837 -66560137 - RSINE1 SINE B4 -74 91 3 9 866 552 169 0 10 chr15 36935504 36935600 -66559374 - PB1D9 SINE Alu -20 100 6 9 866 1268 73 0 0 chr15 36935691 36935855 -66559119 - B2_Mm2 SINE B2 -30 165 2 9 866 200 262 24 12 chr15 36936778 36936863 -66558111 + C-rich Low_complexity Low_complexity 6 91 0 9 866 211 304 152 0 chr15 36937926 36938018 -66556956 - B1F1 SINE Alu -41 108 3 9 866 255 330 36 18 chr15 36938720 36938831 -66556143 - MER20 DNA MER1_type -77 142 30 9 866 1151 82 0 0 chr15 36938947 36939093 -66555881 + B1_Mus2 SINE Alu 2 147 0 9 866 447 236 136 0 chr15 36939659 36939769 -66555205 + B1F SINE Alu 24 148 -1 9 866 263 281 10 59 chr15 36940142 36940244 -66554730 - MER104 DNA Tc2 -70 111 15 9 866 607 324 44 53 chr15 36940246 36940550 -66554424 + L1M4 LINE L1 4393 4693 -1453 9 866 1343 95 16 5 chr15 36940550 36940740 -66554234 - B2_Mm2 SINE B2 -3 192 1 9 866 607 324 44 53 chr15 36940740 36940885 -66554089 + L1M4 LINE L1 4694 4837 -1309 9 866 1540 122 0 121 chr15 36940974 36941272 -66553702 + RLTR23 LTR ERV1 1 262 -168 9 866 225 182 91 0 chr15 36941268 36941312 -66553662 - MTE2b LTR MaLR -329 50 3 9 866 292 242 30 4 chr15 36941315 36941407 -66553567 + L1M4 LINE L1 4842 4937 -1209 9 866 233 360 12 0 chr15 36941484 36941570 -66553404 + L2b LINE L2 3286 3372 -3 9 866 250 213 37 85 chr15 36941710 36941792 -66553182 + L2c LINE L2 3310 3387 0 9 866 348 284 121 44 chr15 36942036 36942334 -66552640 + HAL1 LINE L1 531 851 -1656 9 866 1166 76 0 14 chr15 36942449 36942596 -66552378 + B1_Mus2 SINE Alu 1 145 -2 9 866 205 242 0 31 chr15 36942747 36942782 -66552192 + A-rich Low_complexity Low_complexity 1 35 0 9 866 1159 88 0 0 chr15 36942782 36942929 -66552045 + B1_Mus2 SINE Alu 1 147 0 9 866 205 242 0 31 chr15 36942929 36942948 -66552026 + A-rich Low_complexity Low_complexity 36 54 0 9 866 1461 78 16 0 chr15 36942948 36943139 -66551835 + B2_Mm2 SINE B2 2 195 0 9 866 329 223 25 42 chr15 36943153 36943248 -66551726 + PB1D9 SINE Alu 38 129 -21 9 866 400 275 103 31 chr15 36943579 36943774 -66551200 + HAL1 LINE L1 1642 1850 -657 9 866 294 312 41 41 chr15 36943853 36944000 -66550974 + HAL1 LINE L1 1986 2132 -375 9 866 564 182 70 89 chr15 36944009 36944035 -66550939 - RSINE1 SINE B4 -1 164 145 9 866 246 128 0 0 chr15 36944035 36944074 -66550900 + (TG)n Simple_repeat Simple_repeat 1 39 0 9 866 564 184 70 84 chr15 36944074 36944215 -66550759 - RSINE1 SINE B4 -21 144 1 9 866 273 278 150 43 chr15 36944337 36944544 -66550430 + HAL1 LINE L1 2256 2484 -23 9 866 644 242 15 0 chr15 36944573 36944705 -66550269 + ID_B1 SINE B4 78 211 -13 9 866 699 283 110 68 chr15 36945725 36946062 -66548912 + MER74A LTR ERVL 19 369 -189 9 866 1237 48 0 0 chr15 36946062 36946208 -66548766 + B1_Mm SINE Alu 2 147 0 9 866 26 0 0 0 chr15 36946208 36946234 -66548740 + AT_rich Low_complexity Low_complexity 1 26 0 9 866 2744 137 20 146 chr15 36946393 36946777 -66548197 + RLTR24 LTR ERV1 1 343 -186 9 866 516 72 0 0 chr15 36946777 36946846 -66548128 + (TA)n Simple_repeat Simple_repeat 2 70 0 9 866 2744 137 20 146 chr15 36946846 36946966 -66548008 + RLTR24 LTR ERV1 344 448 -81 9 866 1066 91 7 0 chr15 36946966 36947109 -66547865 - B1_Mus1 SINE Alu 0 148 5 9 866 243 0 0 0 chr15 36947113 36947140 -66547834 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 866 2744 137 20 146 chr15 36947140 36947234 -66547740 + RLTR24 LTR ERV1 449 528 -1 9 866 1214 61 0 0 chr15 36947263 36947410 -66547564 + B1_Mus2 SINE Alu 1 147 0 9 866 342 275 14 15 chr15 36949732 36949865 -66545109 - L1MA4A LINE L1 -253 5936 5765 9 866 270 0 0 0 chr15 36949872 36949902 -66545072 + (TG)n Simple_repeat Simple_repeat 1 30 0 9 866 1427 84 5 0 chr15 36951149 36951340 -66543634 + B2_Mm1a SINE B2 2 193 0 9 866 803 44 0 337 chr15 36951356 36951474 -66543500 + B1_Mus1 SINE Alu 1 63 -85 9 866 1557 42 21 0 chr15 36951474 36951663 -66543311 - B2_Mm1t SINE B2 0 193 1 9 866 803 44 0 337 chr15 36951663 36951749 -66543225 + B1_Mus1 SINE Alu 64 136 -12 9 866 188 34 0 33 chr15 36951752 36951782 -66543192 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9 866 992 177 59 83 chr15 36951896 36952149 -66542825 - B4A SINE B4 0 292 46 9 866 606 282 75 12 chr15 36952435 36952633 -66542341 + B3A SINE B2 3 195 0 9 866 3844 63 42 8 chr15 36952897 36953392 -66541582 - LTRIS3 LTR ERV1 0 512 1 9 866 230 0 33 0 chr15 36953480 36953510 -66541464 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 866 1050 44 82 0 chr15 36953514 36953649 -66541325 - B1_Mus2 SINE Alu 0 147 2 9 866 231 315 137 0 chr15 36953680 36953753 -66541221 - PB1D10 SINE Alu 0 117 35 9 866 1458 60 22 0 chr15 36953759 36953942 -66541032 - B2_Mm2 SINE B2 -8 187 1 1 866 306 0 0 0 chr15 36953968 36954002 -66540972 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 866 2464 167 22 5 chr15 36954294 36954698 -66540276 + MTC LTR MaLR 1 411 -10 1 866 355 232 24 12 chr15 36954749 36954832 -66540142 + PB1D10 SINE Alu 27 110 -7 1 866 362 292 88 75 chr15 36954879 36955038 -66539936 - RSINE1 SINE B4 -2 163 3 1 866 771 107 48 24 chr15 36955062 36955187 -66539787 + B1_Mur4 SINE Alu 23 150 0 1 866 1069 258 120 5 chr15 36955526 36955950 -66539024 + L1MB4 LINE L1 5708 6180 0 1 866 729 212 39 26 chr15 36956680 36956835 -66538139 - B3 SINE B2 -57 159 3 1 866 2472 75 25 3 chr15 36957097 36957417 -66537557 - ORR1A2 LTR MaLR 0 327 1 1 866 394 226 48 0 chr15 36958070 36958154 -66536820 + MTEb LTR MaLR 292 379 0 1 866 1186 82 0 0 chr15 36958367 36958514 -66536460 - B1_Mus2 SINE Alu 0 147 1 1 866 1509 53 27 0 chr15 36959004 36959192 -66535782 - B2_Mm2 SINE B2 -1 194 2 1 866 263 241 19 15 chr15 36960393 36960471 -66534503 + MLT1B LTR MaLR 275 339 -51 1 866 559 299 144 5 chr15 36960481 36960676 -66534298 - ID_B1 SINE B4 -2 222 1 1 866 249 325 63 24 chr15 36960990 36961116 -66533858 + MIRm SINE MIR 25 155 -121 1 866 495 295 108 58 chr15 36962008 36962231 -66532743 - L1ME2 LINE L1 -99 6065 5835 1 108 553 280 40 11 chr15 36962292 36962469 -66532505 - B3A SINE B2 -16 182 1 1 867 350 278 153 80 chr15 36962493 36962806 -66532168 - L1ME2 LINE L1 -332 5847 5512 1 867 180 250 38 100 chr15 36962991 36963071 -66531903 + L4 LINE RTE 999 1073 -956 1 867 261 235 165 16 chr15 36963596 36963717 -66531257 - MER5A1 DNA MER1_type -1 165 27 1 867 1796 189 91 14 chr15 36963991 36964618 -66530356 - RLTR16 LTR ERVK 0 505 1 1 867 352 351 103 18 chr15 36964994 36965267 -66529707 + MLT1H LTR MaLR 46 341 -208 1 867 546 325 79 73 chr15 36965295 36965650 -66529324 - MER68 LTR ERVL -18 589 233 1 867 299 264 14 0 chr15 36965767 36965839 -66529135 + MLT1D LTR MaLR 69 141 -364 1 867 422 319 40 21 chr15 36965861 36966089 -66528885 + MLT1D LTR MaLR 248 505 0 1 867 265 311 45 54 chr15 36966100 36966212 -66528762 - MER68 LTR ERVL -450 113 3 1 867 235 316 25 0 chr15 36966448 36966527 -66528447 + ID2 SINE ID 2 82 -1 1 867 187 356 88 10 chr15 36967215 36967317 -66527657 - L2b LINE L2 -12 3363 3254 1 867 911 260 141 11 chr15 36967536 36967847 -66527127 - MTE2b LTR MaLR 0 379 20 1 867 722 74 0 10 chr15 36967810 36967906 -66527068 + B1_Mus2 SINE Alu 53 147 0 1 867 1224 48 0 0 chr15 36967926 36968071 -66526903 + B1_Mm SINE Alu 1 145 -2 1 867 351 0 0 0 chr15 36968071 36968110 -66526864 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1 867 262 310 14 0 chr15 36968110 36968181 -66526793 - MTE2b LTR MaLR -304 75 4 1 867 823 123 0 0 chr15 36968643 36968757 -66526217 + B3 SINE B2 2 115 -101 1 867 275 240 136 74 chr15 36968816 36968897 -66526077 + B3 SINE B2 131 216 0 1 867 355 267 136 32 chr15 36969358 36969513 -66525461 - B4A SINE B4 -120 172 2 1 867 2080 145 53 102 chr15 36970448 36970917 -66524057 - RLTR41 LTR ERV1 0 446 1 1 867 561 288 67 58 chr15 36971258 36971629 -66523345 - RLTR16 LTR ERVK -234 458 32 1 867 980 33 8 0 chr15 36971628 36971748 -66523226 + B1_Mus1 SINE Alu 28 148 0 1 867 1195 62 7 0 chr15 36971906 36972052 -66522922 - B1_Mus1 SINE Alu 0 148 2 1 867 249 332 152 95 chr15 36972379 36972662 -66522312 - LTR33 LTR ERVL -170 345 47 1 867 223 274 123 0 chr15 36972700 36972773 -66522201 + B4 SINE B4 70 151 -141 1 867 457 284 35 136 chr15 36973205 36973491 -66521483 - MLT1B LTR MaLR 0 390 134 1 867 229 164 197 0 chr15 36973507 36973568 -66521406 + RLTR24 LTR ERV1 3 75 -454 1 867 2212 102 13 9 chr15 36973876 36974194 -66520780 - ORR1A4 LTR MaLR -8 321 3 1 867 231 243 42 14 chr15 36974345 36974416 -66520558 + B1F2 SINE Alu 12 84 -65 1 867 204 211 0 0 chr15 36974447 36974485 -66520489 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 867 306 278 44 0 chr15 36974892 36974982 -66519992 + L2a LINE L2 3299 3392 -34 1 867 270 239 119 0 chr15 36975085 36975152 -66519822 - B1_Mur4 SINE Alu -65 85 11 1 867 1240 35 7 0 chr15 36976159 36976304 -66518670 + B1_Mm SINE Alu 1 146 -1 1 867 1118 75 0 14 chr15 36976793 36976941 -66518033 - B1_Mus2 SINE Alu -1 146 1 1 867 281 246 0 14 chr15 36977440 36977510 -66517464 + ID4_ SINE ID 5 73 -10 1 867 1455 74 16 0 chr15 36977596 36977786 -66517188 + B2_Mm1a SINE B2 1 193 0 1 867 549 277 153 4 chr15 36977949 36978193 -66516781 - B4A SINE B4 -4 288 8 1 867 325 316 173 21 chr15 36978382 36978573 -66516401 - MIRb SINE MIR -41 227 8 1 867 301 271 77 77 chr15 36978648 36978664 -66516310 + MT2B LTR ERVL 98 253 -348 1 867 303 268 121 93 chr15 36978664 36978716 -66516258 + B4 SINE B4 46 189 -103 1 867 437 128 171 23 chr15 36978716 36978804 -66516170 + B1_Mur4 SINE Alu 1 101 -49 1 867 1939 65 4 0 chr15 36978884 36979131 -66515843 + L1_Mus1 LINE L1 6318 6565 -2 1 867 343 62 0 0 chr15 36979233 36979281 -66515693 + B1_Mur4 SINE Alu 103 150 0 1 867 215 354 40 0 chr15 36979657 36979756 -66515218 + RSINE1 SINE B4 61 163 -2 1 867 1152 65 0 0 chr15 36979894 36980032 -66514942 + B1_Mus2 SINE Alu 2 139 -8 1 867 2339 111 3 0 chr15 36980438 36980763 -66514211 - ORR1A3 LTR MaLR 0 326 1 1 867 390 266 59 94 chr15 36980909 36981079 -66513895 + MTEb LTR MaLR 197 360 -19 1 867 1057 133 200 0 chr15 36981161 36981341 -66513633 + B3 SINE B2 1 216 0 1 867 2141 113 47 15 chr15 36981534 36981876 -66513098 + ORR1B1 LTR MaLR 41 393 -1 1 867 189 0 0 0 chr15 36984444 36984465 -66510509 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1 867 408 194 24 228 chr15 36984465 36984719 -66510255 - B3 SINE B2 -14 202 1 1 867 1713 26 0 0 chr15 36985164 36985356 -66509618 - B2_Mm1t SINE B2 0 193 2 1 867 442 330 53 4 chr15 36985378 36985537 -66509437 + ID_B1 SINE B4 80 248 -44 1 867 369 149 0 0 chr15 36985549 36985616 -66509358 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 867 489 274 17 8 chr15 36985675 36985722 -66509252 + PB1D7 SINE Alu 2 48 -72 1 867 4484 63 9 12 chr15 36985722 36986288 -66508686 - LTRIS2 LTR ERV1 0 564 1 1 867 489 274 17 8 chr15 36986288 36986358 -66508616 + PB1D7 SINE Alu 49 119 -1 1 867 539 280 30 0 chr15 36986650 36986782 -66508192 - RSINE1 SINE B4 -19 146 11 1 867 691 42 21 0 chr15 36986885 36986980 -66507994 + (CATA)n Simple_repeat Simple_repeat 2 98 0 1 867 792 241 53 16 chr15 36987743 36987933 -66507041 - B3A SINE B2 0 198 2 1 867 273 224 30 10 chr15 36987933 36988032 -66506942 + T-rich Low_complexity Low_complexity 6 106 0 1 867 364 261 179 77 chr15 36988136 36988331 -66506643 - ID_B1 SINE B4 -6 218 4 1 867 24 0 0 0 chr15 36988499 36988523 -66506451 + AT_rich Low_complexity Low_complexity 1 24 0 1 867 463 303 24 16 chr15 36988523 36988647 -66506327 + Lx8 LINE L1 7143 7267 -206 1 867 1104 168 0 0 chr15 36988844 36989142 -66505832 + (CAGAGA)n Simple_repeat Simple_repeat 1 298 0 1 867 684 102 0 36 chr15 36989163 36989275 -66505699 + B1_Mur4 SINE Alu 43 150 0 1 867 279 0 0 0 chr15 36989346 36989377 -66505597 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1 867 1031 80 60 0 chr15 36989377 36989527 -66505447 - B2_Mm1a SINE B2 -33 160 2 1 867 341 303 186 69 chr15 36989527 36989800 -66505174 - L2a LINE L2 -13 3413 3086 1 867 954 271 159 43 chr15 36989800 36990260 -66504714 + MLT2B2 LTR ERVL 1 513 -2 1 867 355 287 185 10 chr15 36990260 36990487 -66504487 - L2a LINE L2 -341 3085 2820 1 867 872 197 176 21 chr15 36992516 36992754 -66502220 + B4A SINE B4 3 277 -15 1 867 566 63 13 0 chr15 36992789 36992868 -66502106 + (GA)n Simple_repeat Simple_repeat 1 80 0 1 867 360 299 83 0 chr15 36992880 36993024 -66501950 - MLT1E1A LTR MaLR -114 566 411 1 867 1017 206 36 27 chr15 36994193 36994238 -66500736 + URR1A DNA MER1_type 1 46 -180 1 867 1173 29 0 7 chr15 36994238 36994375 -66500599 + B1_Mus2 SINE Alu 4 139 -8 1 867 1017 206 36 27 chr15 36994375 36994401 -66500573 + URR1A DNA MER1_type 47 176 -50 1 867 444 242 23 64 chr15 36994401 36994499 -66500475 - CYRA11_Mm Unknown Y-chromosome -298 319 228 1 867 4453 63 16 2 chr15 36994499 36995055 -66499919 + LTRIS2 LTR ERV1 1 564 0 1 867 1017 206 36 27 chr15 36995055 36995108 -66499866 + URR1A DNA MER1_type 177 225 -1 1 867 444 242 23 64 chr15 36995108 36995128 -66499846 - CYRA11_Mm Unknown Y-chromosome -390 227 155 1 867 183 156 0 0 chr15 36995585 36995617 -66499357 + GA-rich Low_complexity Low_complexity 2 33 0 1 867 215 292 40 50 chr15 36995982 36996083 -66498891 - L2 LINE L2 -858 2561 2462 1 867 612 67 0 0 chr15 36996346 36996436 -66498538 + (GA)n Simple_repeat Simple_repeat 1 90 0 1 867 337 315 22 0 chr15 36996632 36996724 -66498250 - ID_B1 SINE B4 -29 195 102 1 867 306 236 44 22 chr15 36996764 36996855 -66498119 - ID_B1 SINE B4 -124 100 8 1 867 239 316 12 12 chr15 36998990 36999070 -66495904 - MER81 DNA AcHobo -2 112 33 1 867 234 191 0 0 chr15 37000296 37000338 -66494636 - LTR16E1 LTR ERVL -464 74 33 1 867 586 160 373 31 chr15 37000432 37000593 -66494381 + B3 SINE B2 1 216 0 2 867 216 327 0 88 chr15 37000782 37000851 -66494123 - MIRb SINE MIR -76 192 127 3 867 2688 106 30 12 chr15 37000851 37001253 -66493721 + RLTR9E LTR ERVK 1 409 0 4 867 216 327 0 88 chr15 37001253 37001297 -66493677 - MIRb SINE MIR -142 126 89 3 867 284 289 19 19 chr15 37001368 37001474 -66493500 - MLT1C LTR MaLR 0 467 362 5 867 265 311 63 32 chr15 37001547 37001673 -66493301 - MLT1C LTR MaLR -145 245 116 5 867 761 274 124 99 chr15 37001891 37002100 -66492874 - RMER5 LTR ERV1 -17 517 327 6 867 321 26 0 0 chr15 37002100 37002138 -66492836 + (GA)n Simple_repeat Simple_repeat 1 38 0 7 867 761 274 124 99 chr15 37002138 37002394 -66492580 - RMER5 LTR ERV1 -208 326 40 6 867 3601 64 30 4 chr15 37002623 37003093 -66491881 - RLTR45 LTR ERVK 0 482 1 8 867 7953 44 0 0 chr15 37003093 37004005 -66490969 - RLTR45-int LTR ERVK 0 7244 6333 8 867 1903 104 13 3 chr15 37004005 37004304 -66490670 - RLTR13B1 LTR ERVK -385 508 207 9 867 8218 43 16 5 chr15 37004326 37005323 -66489651 - RLTR45-int LTR ERVK -1172 6072 5065 8 867 11869 55 22 16 chr15 37005316 37007709 -66487265 - RLTR45-int LTR ERVK -3258 3986 1322 8 867 261 218 54 54 chr15 37008002 37008094 -66486880 - MMTV-int LTR ERVK -4749 2504 2413 1 867 1143 58 0 0 chr15 37008493 37008631 -66486343 - RLTR45-int LTR ERVK -6426 818 681 8 867 4368 71 114 19 chr15 37008922 37009554 -66485420 - RLTR45-int LTR ERVK -6552 692 1 8 867 3634 64 30 2 chr15 37009554 37010023 -66484951 - RLTR45 LTR ERVK 0 482 1 8 867 225 108 0 0 chr15 37010360 37010397 -66484577 + (A)n Simple_repeat Simple_repeat 1 37 0 1 867 310 223 42 97 chr15 37010514 37010658 -66484316 + MER3 DNA MER1_type 23 158 -51 1 867 1960 142 28 139 chr15 37010662 37011135 -66483839 - RLTR23 LTR ERV1 0 430 11 1 867 598 173 72 43 chr15 37011490 37011629 -66483345 - MTB_Mm LTR MaLR 0 421 279 1 867 508 231 85 40 chr15 37011981 37012157 -66482817 + RLTR41 LTR ERV1 263 446 0 1 867 1447 171 7 19 chr15 37012157 37012426 -66482548 - MTB_Mm LTR MaLR -141 266 1 1 867 191 380 9 18 chr15 37012800 37012910 -66482064 + MIRb SINE MIR 139 247 -21 1 867 971 219 65 0 chr15 37012910 37013111 -66481863 + ID_B1 SINE B4 2 215 -9 1 867 261 0 0 0 chr15 37013111 37013140 -66481834 + (CAGA)n Simple_repeat Simple_repeat 4 32 0 1 867 210 340 32 0 chr15 37013170 37013264 -66481710 + MIRc SINE MIR 59 155 -113 1 867 32 57 0 0 chr15 37013532 37013585 -66481389 + AT_rich Low_complexity Low_complexity 1 53 0 2 867 803 220 60 5 chr15 37013585 37013786 -66481188 - B3 SINE B2 -4 212 1 2 867 276 302 94 0 chr15 37014015 37014121 -66480853 - MIR SINE MIR -104 158 43 2 867 1911 209 165 74 chr15 37014214 37014771 -66480203 + RMER19C LTR ERVK 1 608 -3 2 867 396 0 0 0 chr15 37014771 37014815 -66480159 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 867 779 127 441 51 chr15 37016316 37016572 -66478402 + ORR1C1 LTR MaLR 5 360 -18 2 867 393 86 0 0 chr15 37016591 37016649 -66478325 + (CATAT)n Simple_repeat Simple_repeat 3 60 0 2 867 305 339 37 30 chr15 37016661 37016795 -66478179 - B1F SINE Alu -13 136 2 2 867 696 273 46 0 chr15 37016795 37016870 -66478104 - ID SINE ID -140 84 1 2 867 36 0 0 0 chr15 37016934 37016970 -66478004 + AT_rich Low_complexity Low_complexity 1 36 0 2 867 301 250 78 21 chr15 37016972 37017069 -66477905 - B1F SINE Alu -15 112 1 3 867 1020 225 5 9 chr15 37017095 37017310 -66477664 - B3 SINE B2 -1 215 2 3 867 1256 48 0 0 chr15 37017346 37017493 -66477481 - B1_Mus1 SINE Alu 0 148 2 3 867 564 56 0 0 chr15 37017701 37017773 -66477201 + (TC)n Simple_repeat Simple_repeat 2 73 0 3 867 2484 198 32 48 chr15 37018263 37018889 -66476085 + RMER3D-int LTR ERVK 2225 2840 -2 3 867 2194 164 40 45 chr15 37018891 37019512 -66475462 + RLTR31_Mm LTR ERVK 1 584 0 3 867 354 277 16 40 chr15 37019544 37019668 -66475306 + MLT1L LTR MaLR 151 271 -339 3 867 203 296 0 40 chr15 37019690 37019732 -66475242 + polypyrimidine Low_complexity Low_complexity 31 71 0 3 867 962 107 6 0 chr15 37019732 37019900 -66475074 + (TC)n Simple_repeat Simple_repeat 1 169 0 3 867 207 0 0 0 chr15 37019900 37019922 -66475052 + (CG)n Simple_repeat Simple_repeat 2 24 0 3 867 203 296 0 40 chr15 37019922 37019952 -66475022 + polypyrimidine Low_complexity Low_complexity 2 30 0 3 867 396 0 0 0 chr15 37020234 37020278 -66474696 + (TGG)n Simple_repeat Simple_repeat 1 44 0 4 867 487 310 45 0 chr15 37020282 37020437 -66474537 - B3A SINE B2 -35 163 2 4 867 450 261 142 0 chr15 37020460 37020636 -66474338 + Lx8 LINE L1 6822 7022 -451 4 867 3386 135 59 8 chr15 37020644 37021255 -66473719 + RLTR26 LTR ERVK 1 642 0 4 867 633 305 70 29 chr15 37021271 37021514 -66473460 + Lx8 LINE L1 7041 7293 -180 4 867 635 209 54 0 chr15 37021562 37021691 -66473283 + B1_Mur3 SINE Alu 3 138 -11 4 867 369 0 0 0 chr15 37021691 37021732 -66473242 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 4 867 225 178 0 0 chr15 37021733 37021778 -66473196 + (CAGAGA)n Simple_repeat Simple_repeat 4 48 0 4 867 2927 11 5 123 chr15 37021795 37022211 -66472763 - IAPLTR1_Mm LTR ERVK 0 367 1 4 867 29649 18 1 0 chr15 37022211 37025480 -66469494 - IAPEz-int LTR ERVK 0 6481 3210 4 867 7735 61 110 92 chr15 37025479 37026762 -66468212 - IAPEz-int LTR ERVK -5168 1313 8 4 867 2927 11 5 123 chr15 37026762 37027178 -66467796 - IAPLTR1_Mm LTR ERVK 0 367 1 4 867 1245 41 0 0 chr15 37027703 37027850 -66467124 + B1_Mm SINE Alu 1 147 0 4 867 417 198 0 0 chr15 37028488 37028579 -66466395 + (CGTG)n Simple_repeat Simple_repeat 1 91 0 4 867 1014 226 168 25 chr15 37029520 37029842 -66465132 + ORR1D2 LTR MaLR 1 368 -2 5 867 235 0 0 54 chr15 37029984 37030021 -66464953 + (CCCCG)n Simple_repeat Simple_repeat 1 35 0 5 867 675 246 36 5 chr15 37031245 37031437 -66463537 + B3A SINE B2 1 198 0 5 867 974 155 0 0 chr15 37031558 37031700 -66463274 + B1_Mus1 SINE Alu 1 142 -6 5 867 186 43 0 0 chr15 37031702 37031725 -66463249 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 867 198 0 0 0 chr15 37031844 37031866 -66463108 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 5 867 6675 41 24 0 chr15 37032331 37033115 -66461859 - RLTR13B4 LTR ERVK 0 803 1 5 867 225 0 0 0 chr15 37033181 37033206 -66461768 + (A)n Simple_repeat Simple_repeat 1 25 0 5 867 1137 67 49 0 chr15 37034021 37034185 -66460789 - B2_Mm2 SINE B2 -22 173 2 5 867 318 106 0 0 chr15 37034185 37034232 -66460742 - RMER2 LTR ERV1 -520 47 1 5 867 249 33 0 0 chr15 37034348 37034378 -66460596 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 867 2388 125 36 87 chr15 37034598 37034824 -66460150 - RMER16-int LTR ERVK -101 5305 5089 6 867 1579 48 0 5 chr15 37034824 37035013 -66459961 + B2_Mm1t SINE B2 2 189 -4 6 867 2388 125 36 87 chr15 37035013 37035234 -66459740 - RMER16-int LTR ERVK -318 5088 4881 6 867 280 103 35 0 chr15 37035398 37035456 -66459518 + (TC)n Simple_repeat Simple_repeat 2 61 0 6 867 1521 48 0 21 chr15 37035485 37035676 -66459298 - B2_Mm1a SINE B2 -6 187 1 6 867 299 243 92 105 chr15 37036293 37036445 -66458529 + RMER17C-int LTR ERVK 375 524 -2714 6 867 598 335 10 49 chr15 37036397 37036590 -66458384 + RodERV21-int LTR ERV1 706 895 -4096 6 867 949 95 36 0 chr15 37036590 37036727 -66458247 - B1_Mus1 SINE Alu -2 146 5 6 867 598 335 10 49 chr15 37036727 37036838 -66458136 + RodERV21-int LTR ERV1 896 998 -3993 6 867 1397 274 44 34 chr15 37037161 37037569 -66457405 + RodERV21-int LTR ERV1 1289 1700 -3291 6 867 1456 31 0 7 chr15 37037574 37037864 -66457110 + (TTC)n Simple_repeat Simple_repeat 1 287 0 6 867 604 171 7 7 chr15 37037864 37037880 -66457094 + polypyrimidine Low_complexity Low_complexity 125 141 0 6 867 1414 67 0 8 chr15 37037880 37038244 -66456730 + (TTC)n Simple_repeat Simple_repeat 1 360 0 7 867 604 171 7 7 chr15 37038244 37038364 -66456610 + CT-rich Low_complexity Low_complexity 6 124 0 7 867 653 153 76 8 chr15 37038364 37038496 -66456478 + RMER1C Other Other 1201 1341 -1 7 867 375 285 158 26 chr15 37038893 37039127 -66455847 - RMER13A LTR ERVK -394 466 202 7 867 1804 171 86 10 chr15 37039126 37039511 -66455463 - RLTR11B LTR ERVK -39 414 1 7 867 333 0 0 0 chr15 37040209 37040246 -66454728 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 867 279 0 0 0 chr15 37040560 37040591 -66454383 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 867 669 179 7 28 chr15 37040954 37041098 -66453876 + B1_Mur4 SINE Alu 9 149 -1 7 867 234 91 0 0 chr15 37041098 37041131 -66453843 + (GGA)n Simple_repeat Simple_repeat 2 34 0 7 867 375 23 0 0 chr15 37041446 37041490 -66453484 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 867 747 87 0 0 chr15 37041548 37041652 -66453322 + (CAT)n Simple_repeat Simple_repeat 2 105 0 8 867 705 183 203 39 chr15 37041727 37041909 -66453065 - B3 SINE B2 0 216 5 8 867 3776 70 32 4 chr15 37042486 37042986 -66451988 - L1_Mus3 LINE L1 -6 6632 6119 8 867 1137 102 0 0 chr15 37042986 37043152 -66451822 + (TTTC)n Simple_repeat Simple_repeat 3 168 0 8 867 1150 63 0 0 chr15 37043153 37043295 -66451679 - B1_Mus2 SINE Alu -4 143 2 8 867 951 152 0 0 chr15 37043295 37043459 -66451515 + T-rich Low_complexity Low_complexity 3 166 0 8 867 3744 74 8 0 chr15 37043470 37043958 -66451016 - L1_Mus3 LINE L1 -509 6127 5636 8 867 207 0 0 0 chr15 37044031 37044054 -66450920 + (T)n Simple_repeat Simple_repeat 1 23 0 8 867 1000 222 5 19 chr15 37044434 37044650 -66450324 + B3 SINE B2 1 213 -3 8 867 892 148 42 0 chr15 37044791 37044933 -66450041 + B1_Mus1 SINE Alu 1 148 0 8 867 773 150 0 29 chr15 37044995 37045132 -66449842 - L1VL4 LINE L1 -5669 633 501 8 867 562 249 155 27 chr15 37045143 37045362 -66449612 + MTEa LTR MaLR 49 295 -84 9 867 407 265 83 39 chr15 37045382 37045664 -66449310 + L1MA5A LINE L1 5736 6031 -272 9 867 746 153 7 21 chr15 37045750 37045890 -66449084 - B1_Mus2 SINE Alu 0 147 10 9 867 22664 56 1 1 chr15 37046140 37048951 -66446023 + L1Md_F2 LINE L1 2777 5586 -297 9 867 8175 50 2 2 chr15 37048951 37049935 -66445039 + L1Md_F2 LINE L1 5587 6570 -12 9 867 791 293 16 20 chr15 37050688 37050942 -66444032 - L1MC1 LINE L1 -494 5839 5587 9 867 1238 27 7 0 chr15 37051165 37051311 -66443663 - B1_Mm SINE Alu 0 147 1 9 867 832 61 0 0 chr15 37051315 37051430 -66443544 - B1_Mus2 SINE Alu 0 147 33 9 867 516 148 290 0 chr15 37052206 37052368 -66442606 + MTD LTR MaLR 171 379 -40 9 867 773 163 96 0 chr15 37052749 37052884 -66442090 + B1_Mur2 SINE Alu 2 149 0 9 867 201 147 0 0 chr15 37052991 37053025 -66441949 + (TTC)n Simple_repeat Simple_repeat 2 35 0 9 867 269 26 26 0 chr15 37053026 37053064 -66441910 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 867 1124 90 0 0 chr15 37053091 37053235 -66441739 - B1_Mus1 SINE Alu -4 144 1 1 867 33 0 0 0 chr15 37053488 37053521 -66441453 + AT_rich Low_complexity Low_complexity 1 33 0 1 867 668 196 256 0 chr15 37053523 37053691 -66441283 - B3 SINE B2 -5 211 1 1 867 380 111 14 0 chr15 37054415 37054487 -66440487 + (CA)n Simple_repeat Simple_repeat 1 73 0 1 867 351 0 0 0 chr15 37054487 37054525 -66440449 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 867 224 59 0 29 chr15 37054529 37054564 -66440410 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 867 686 173 6 0 chr15 37054579 37054741 -66440233 + (CA)n Simple_repeat Simple_repeat 1 163 0 1 867 974 170 2 7 chr15 37055013 37055456 -66439518 + GA-rich Low_complexity Low_complexity 1 440 0 1 867 380 282 100 0 chr15 37055590 37055700 -66439274 - MTE2b LTR MaLR -185 194 74 1 867 390 273 132 31 chr15 37055702 37055861 -66439113 + B3A SINE B2 8 182 -16 1 867 780 68 0 0 chr15 37055879 37055982 -66438992 + (GGAA)n Simple_repeat Simple_repeat 3 105 0 1 867 288 222 80 40 chr15 37055983 37056058 -66438916 - MTE2b LTR MaLR -301 78 1 1 867 944 162 7 0 chr15 37056129 37056277 -66438697 + B1_Mur4 SINE Alu 1 149 -1 1 867 423 0 0 0 chr15 37056280 37056327 -66438647 + (GGA)n Simple_repeat Simple_repeat 3 49 0 1 867 660 223 0 0 chr15 37056338 37056450 -66438524 + PB1D9 SINE Alu 9 120 0 1 867 610 112 20 55 chr15 37056840 37057097 -66437877 + (CA)n Simple_repeat Simple_repeat 1 247 0 1 867 360 0 0 0 chr15 37057167 37057207 -66437767 + (T)n Simple_repeat Simple_repeat 1 40 0 1 867 367 72 771 0 chr15 37057207 37057290 -66437684 - B1_Mm SINE Alu 0 147 1 1 867 191 36 0 35 chr15 37057305 37057334 -66437640 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1 867 261 309 75 0 chr15 37057334 37057428 -66437546 - PB1D10 SINE Alu -12 105 5 1 867 643 216 22 0 chr15 37057784 37057923 -66437051 + B1F SINE Alu 3 144 -5 1 867 481 188 34 47 chr15 37058199 37058334 -66436640 - ID_B1 SINE B4 -56 168 49 1 867 276 53 0 0 chr15 37058638 37058676 -66436298 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 1 867 904 163 30 29 chr15 37058899 37059085 -66435889 - B3 SINE B2 -18 177 1 1 867 245 361 55 18 chr15 37059446 37059470 -66435504 + ID_B1 SINE B4 63 144 -80 1 867 344 256 76 13 chr15 37059470 37059549 -66435425 + PB1D10 SINE Alu 5 88 -29 1 867 504 297 57 84 chr15 37059591 37059889 -66435085 + B4 SINE B4 3 292 0 1 867 23 0 0 0 chr15 37060784 37060807 -66434167 + AT_rich Low_complexity Low_complexity 1 23 0 1 867 260 283 72 98 chr15 37061473 37061566 -66433408 + MLT1A1 LTR MaLR 248 345 -63 1 867 201 26 0 73 chr15 37061566 37061607 -66433367 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 1 867 825 158 8 0 chr15 37061610 37061743 -66433231 - B1_Mus2 SINE Alu -13 134 1 1 867 260 283 72 98 chr15 37061743 37061798 -66433176 + MLT1A1 LTR MaLR 346 393 -15 1 867 484 244 13 9 chr15 37061965 37062085 -66432889 - B1_Mm SINE Alu -25 124 3 1 867 873 158 22 22 chr15 37062106 37062293 -66432681 - B3 SINE B2 -6 189 3 1 867 3079 40 18 18 chr15 37062322 37062703 -66432271 - L1Md_F2 LINE L1 0 6582 6202 1 867 880 227 42 46 chr15 37062724 37062941 -66432033 - B3 SINE B2 0 216 1 1 867 713 186 20 60 chr15 37062974 37063123 -66431851 + B1_Mur1 SINE Alu 5 147 -2 1 867 180 0 0 0 chr15 37063128 37063148 -66431826 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1 867 453 293 114 3 chr15 37063358 37063568 -66431406 - L1MB4 LINE L1 -334 5846 5615 1 867 213 39 0 0 chr15 37063971 37063997 -66430977 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 867 504 0 0 0 chr15 37063997 37064052 -66430922 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 867 482 290 111 0 chr15 37064193 37064355 -66430619 - MER20 DNA MER1_type -9 210 31 1 867 513 161 223 0 chr15 37064440 37064552 -66430422 - B1_Mus2 SINE Alu -6 141 5 1 867 590 224 17 17 chr15 37064687 37064805 -66430169 - PB1D7 SINE Alu -1 119 2 1 867 1268 34 0 0 chr15 37066062 37066209 -66428765 - B1_Mus1 SINE Alu 0 148 2 1 867 303 28 0 0 chr15 37066792 37066828 -66428146 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 867 189 0 0 0 chr15 37066828 37066849 -66428125 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 867 247 322 30 61 chr15 37067361 37067460 -66427514 + MIR SINE MIR 111 206 -56 1 867 318 236 13 40 chr15 37068515 37068590 -66426384 - ID4_ SINE ID -9 74 2 1 867 1173 113 35 30 chr15 37068615 37068816 -66426158 + Lx3_Mus LINE L1 6805 7006 -3 1 867 355 283 20 0 chr15 37068873 37068972 -66426002 + B3A SINE B2 6 106 -92 1 867 357 24 0 0 chr15 37068989 37069031 -66425943 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 867 673 257 21 0 chr15 37069452 37069596 -66425378 - B1_Mur1 SINE Alu -1 148 2 1 867 558 288 69 37 chr15 37069848 37070093 -66424881 - L1M5 LINE L1 -397 5776 5524 1 867 279 110 13 27 chr15 37070768 37070809 -66424165 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 1 867 1203 41 14 0 chr15 37070809 37070955 -66424019 + B1_Mus1 SINE Alu 1 148 0 1 867 279 110 13 27 chr15 37070955 37070988 -66423986 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 1 867 451 235 80 14 chr15 37071013 37071151 -66423823 - Lx7 LINE L1 -361 7335 7189 1 867 630 283 84 21 chr15 37071154 37071167 -66423807 - ID_B1 SINE B4 -13 211 199 1 867 330 329 49 7 chr15 37071167 37071311 -66423663 - RSINE1 SINE B4 -11 154 5 1 867 630 283 84 21 chr15 37071311 37071488 -66423486 - ID_B1 SINE B4 -26 198 9 1 867 256 242 83 10 chr15 37072838 37072934 -66422040 - Lx7 LINE L1 -5 7691 7589 1 867 909 133 60 12 chr15 37073043 37073211 -66421763 - L1Md_F3 LINE L1 0 6584 6409 1 867 192 77 0 0 chr15 37073224 37073250 -66421724 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 867 1056 189 103 16 chr15 37073608 37073850 -66421124 - Lx7 LINE L1 -571 7125 6863 1 867 2677 129 114 62 chr15 37073863 37074398 -66420576 - RLTR20D LTR ERVK -5 563 1 1 867 23 0 0 0 chr15 37074650 37074673 -66420301 + AT_rich Low_complexity Low_complexity 1 23 0 1 867 276 310 49 20 chr15 37074730 37074832 -66420142 + MTD LTR MaLR 1 105 -314 1 867 756 216 0 39 chr15 37075309 37075463 -66419511 + B1_Mur1 SINE Alu 1 148 -1 1 867 327 104 0 0 chr15 37075463 37075511 -66419463 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 1 867 794 178 0 40 chr15 37076694 37076846 -66418128 + B1_Mus2 SINE Alu 1 146 -1 1 867 312 292 56 11 chr15 37076983 37077073 -66417901 + RSINE1 SINE B4 68 161 -4 1 867 25 31 0 0 chr15 37077073 37077105 -66417869 + AT_rich Low_complexity Low_complexity 1 32 0 1 867 1293 82 54 11 chr15 37077167 37077353 -66417621 - B2_Mm2 SINE B2 -1 194 1 1 867 3422 38 2 0 chr15 37078624 37079019 -66415955 - MTA_Mm LTR MaLR 0 396 1 1 867 9314 32 4 2 chr15 37079019 37080115 -66414859 - MTA_Mm-int LTR MaLR 0 1098 1 1 867 3449 35 2 0 chr15 37080115 37080510 -66414464 - MTA_Mm LTR MaLR 0 396 1 1 867 518 296 127 100 chr15 37080610 37081082 -66413892 + MLT1H2 LTR MaLR 5 489 0 1 867 349 284 42 10 chr15 37081508 37081604 -66413370 - RLTR20A2 LTR ERVK 0 578 480 1 867 473 333 24 0 chr15 37081632 37081755 -66413219 + B1F1 SINE Alu 14 139 -10 1 867 21 0 0 0 chr15 37081887 37081908 -66413066 + AT_rich Low_complexity Low_complexity 1 21 0 1 867 619 188 192 88 chr15 37081908 37082041 -66412933 - B3 SINE B2 0 216 52 1 867 1003 143 108 6 chr15 37082041 37082217 -66412757 + B2_Mm2 SINE B2 2 195 0 1 867 619 188 192 88 chr15 37082217 37082276 -66412698 - B3 SINE B2 -165 51 4 1 867 201 39 0 0 chr15 37082283 37082309 -66412665 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1 867 2347 222 80 103 chr15 37082478 37083475 -66411499 + RMER17B LTR ERVK 1 904 -4 1 867 915 80 0 0 chr15 37083794 37083919 -66411055 + (TCCC)n Simple_repeat Simple_repeat 4 128 0 1 867 271 267 10 62 chr15 37084538 37084634 -66410340 + MLT1A1 LTR MaLR 314 404 -4 1 867 822 211 0 0 chr15 37085641 37085821 -66409153 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 867 2782 266 57 68 chr15 37085835 37086460 -66408514 - Lx8 LINE L1 -25 7448 6844 1 867 423 0 0 0 chr15 37086460 37086507 -66408467 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 867 2782 266 57 68 chr15 37086507 37086920 -66408054 - Lx8 LINE L1 -630 6843 6422 1 867 236 333 129 29 chr15 37087185 37087324 -66407650 - Cheshire DNA MER1_type -2247 173 21 1 867 996 234 55 30 chr15 37087806 37088136 -66406838 + L1M2 LINE L1 4890 5227 -916 1 867 840 153 72 7 chr15 37088289 37088427 -66406547 + B1_Mus2 SINE Alu 1 147 0 1 867 201 74 0 0 chr15 37088485 37088512 -66406462 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1 867 252 241 0 33 chr15 37088748 37088808 -66406166 + B1F2 SINE Alu 13 70 -79 1 867 200 259 0 0 chr15 37089232 37089286 -66405688 + C-rich Low_complexity Low_complexity 1 54 0 1 867 271 233 54 14 chr15 37090152 37090226 -66404748 + Lx8 LINE L1 5343 5419 -461 1 867 365 228 80 80 chr15 37090365 37090498 -66404476 + RSINE1 SINE B4 8 141 -24 1 867 360 0 0 0 chr15 37090498 37090538 -66404436 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 867 364 245 97 36 chr15 37090554 37090719 -66404255 + Lx8 LINE L1 5735 5909 -1564 1 867 200 270 0 16 chr15 37090956 37091020 -66403954 + G-rich Low_complexity Low_complexity 4 66 0 1 867 660 155 18 9 chr15 37091602 37091713 -66403261 + B1_Mus1 SINE Alu 35 146 -2 1 867 3137 75 2 2 chr15 37091757 37092157 -66402817 - MTB LTR MaLR 0 400 1 1 867 7419 65 45 72 chr15 37092157 37093285 -66401689 - MTB-int LTR MaLR 0 1098 1 1 108 972 128 7 0 chr15 37093285 37093433 -66401541 - MTB LTR MaLR 0 400 252 1 868 243 286 25 25 chr15 37093497 37093576 -66401398 - B4A SINE B4 0 292 214 1 868 483 296 35 0 chr15 37093599 37093714 -66401260 - RSINE1 SINE B4 -10 155 37 1 868 543 244 174 11 chr15 37093740 37093918 -66401056 - B4A SINE B4 -59 233 27 1 868 210 71 0 0 chr15 37095219 37095247 -66399727 + (TCC)n Simple_repeat Simple_repeat 3 30 0 1 868 482 128 277 0 chr15 37095252 37095346 -66399628 - B1_Mus1 SINE Alu -7 141 22 1 868 186 43 0 0 chr15 37095496 37095519 -66399455 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 868 180 316 139 48 chr15 37097193 37097402 -66397572 + L2 LINE L2 287 514 -2905 2 868 756 174 212 6 chr15 37097417 37097596 -66397378 + B3 SINE B2 1 216 0 2 868 206 32 0 31 chr15 37099176 37099208 -66395766 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 2 868 915 133 20 27 chr15 37099208 37099355 -66395619 - B1_Mus1 SINE Alu 0 148 3 2 868 743 97 0 9 chr15 37099779 37099894 -66395080 + (TTTC)n Simple_repeat Simple_repeat 3 116 0 2 868 570 29 0 0 chr15 37100309 37100377 -66394597 + (TCC)n Simple_repeat Simple_repeat 2 69 0 2 868 1131 15 66 0 chr15 37100405 37100541 -66394433 - B1_Mm SINE Alu 0 147 3 2 868 473 0 18 0 chr15 37102200 37102257 -66392717 + (TAA)n Simple_repeat Simple_repeat 3 60 0 2 868 411 141 155 0 chr15 37102263 37102334 -66392640 + B1_Mus2 SINE Alu 60 141 -6 2 868 31 21 0 20 chr15 37102334 37102370 -66392604 + AT_rich Low_complexity Low_complexity 1 36 0 2 868 1637 27 0 11 chr15 37102370 37102559 -66392415 + B2_Mm1a SINE B2 2 188 -5 2 868 31 21 0 20 chr15 37102559 37102571 -66392403 + AT_rich Low_complexity Low_complexity 1 12 0 2 868 1751 16 0 0 chr15 37102632 37102825 -66392149 - B2_Mm1a SINE B2 0 193 1 2 868 2205 79 76 0 chr15 37103293 37103597 -66391377 + ORR1A2 LTR MaLR 1 327 0 2 868 813 178 13 20 chr15 37103883 37104032 -66390942 + B1_Mur4 SINE Alu 2 149 -1 2 868 370 217 0 0 chr15 37104054 37104123 -66390851 + ID4_ SINE ID 1 69 -14 2 868 186 71 0 0 chr15 37104522 37104550 -66390424 + (TC)n Simple_repeat Simple_repeat 2 29 0 2 868 1348 82 16 5 chr15 37104552 37104736 -66390238 - B2_Mm2 SINE B2 -9 186 1 2 868 431 292 51 0 chr15 37104775 37104912 -66390062 + B1F SINE Alu 1 144 -5 2 868 477 254 128 96 chr15 37107850 37108037 -66386937 - B3A SINE B2 -5 193 1 2 868 560 235 84 49 chr15 37108710 37108792 -66386182 + B3 SINE B2 1 86 -130 2 868 698 271 60 137 chr15 37108792 37108969 -66386005 + RLTR16 LTR ERVK 1 169 -336 2 868 189 0 0 0 chr15 37108969 37108990 -66385984 + (GA)n Simple_repeat Simple_repeat 1 21 0 2 868 698 271 60 137 chr15 37108990 37109359 -66385615 + RLTR16 LTR ERVK 170 504 -1 2 868 560 235 84 49 chr15 37109359 37109419 -66385555 + B3 SINE B2 87 148 -68 2 868 267 192 0 0 chr15 37109432 37109484 -66385490 - MT2A LTR ERVL 0 584 533 2 868 375 78 0 0 chr15 37109486 37109537 -66385437 + (TCCC)n Simple_repeat Simple_repeat 3 53 0 2 868 967 242 122 29 chr15 37109562 37109929 -66385045 - MT2A LTR ERVL -63 538 2 2 868 3510 122 30 116 chr15 37110127 37110784 -66384190 + MT2B LTR ERVL 1 601 0 2 868 1061 258 87 92 chr15 37111248 37111650 -66383324 + RLTR23 LTR ERV1 1 400 -30 2 868 495 0 0 0 chr15 37112166 37112221 -66382753 + (TC)n Simple_repeat Simple_repeat 2 56 0 2 868 521 188 56 76 chr15 37112791 37112935 -66382039 + B1F1 SINE Alu 2 142 -7 2 868 293 253 10 139 chr15 37113072 37113173 -66381801 + MLT1H LTR MaLR 462 549 0 2 868 254 294 86 29 chr15 37114477 37114582 -66380392 + MIR SINE MIR 36 146 -62 2 868 300 53 0 0 chr15 37115474 37115512 -66379462 + (CAGA)n Simple_repeat Simple_repeat 2 39 0 2 868 247 203 27 0 chr15 37115522 37115596 -66379378 + GA-rich Low_complexity Low_complexity 4 79 0 2 868 724 234 125 0 chr15 37116289 37116481 -66378493 + B3 SINE B2 1 216 0 2 868 2893 168 137 23 chr15 37116519 37117133 -66377841 - RMER6C LTR ERVK -6 684 1 2 868 275 284 137 0 chr15 37117184 37117279 -66377695 + B4 SINE B4 180 287 -5 2 868 268 339 0 0 chr15 37117301 37117416 -66377558 + (CA)n Simple_repeat Simple_repeat 2 116 0 2 868 255 31 0 0 chr15 37117416 37117448 -66377526 + (CAAT)n Simple_repeat Simple_repeat 1 32 0 2 868 339 277 79 0 chr15 37117470 37117571 -66377403 + B1F2 SINE Alu 5 113 -36 2 868 314 286 43 43 chr15 37117571 37117587 -66377387 + ID_B1 SINE B4 86 202 -22 2 868 657 169 8 33 chr15 37117690 37117812 -66377162 - B1_Mur4 SINE Alu 0 150 32 2 868 903 224 65 25 chr15 37117813 37118014 -66376960 - RLTR19 LTR ERVK 0 499 291 2 868 29 0 0 0 chr15 37118105 37118134 -66376840 + AT_rich Low_complexity Low_complexity 1 29 0 2 868 1196 68 0 0 chr15 37118134 37118281 -66376693 - B1_Mm SINE Alu 0 147 1 2 868 586 223 137 58 chr15 37118387 37118577 -66376397 + B3 SINE B2 12 216 0 2 868 24 0 0 0 chr15 37118643 37118667 -66376307 + AT_rich Low_complexity Low_complexity 1 24 0 2 868 1433 60 5 16 chr15 37118669 37118854 -66376120 - B2_Mm1t SINE B2 -10 183 1 2 868 1008 86 19 19 chr15 37118855 37119009 -66375965 - B2_Mm2 SINE B2 -15 180 27 2 868 600 280 46 29 chr15 37118987 37119160 -66375814 + B3 SINE B2 27 202 -14 2 868 696 205 24 0 chr15 37119188 37119315 -66375659 + B1_Mus2 SINE Alu 12 141 -6 2 868 264 122 0 0 chr15 37119315 37119356 -66375618 + (CAG)n Simple_repeat Simple_repeat 1 41 0 2 868 316 264 42 120 chr15 37120247 37120389 -66374585 - MLT1B LTR MaLR -6 384 254 2 868 242 248 18 73 chr15 37121563 37121672 -66373302 - MURVY-LTR LTR ERV1 -178 341 239 2 868 433 200 156 0 chr15 37121618 37121708 -66373266 + B3A SINE B2 7 110 -88 2 868 839 144 61 0 chr15 37121708 37121840 -66373134 - B1_Mur2 SINE Alu -8 141 2 2 868 756 219 7 0 chr15 37123345 37123491 -66371483 - B1_Mus2 SINE Alu 0 147 1 2 868 1091 102 12 0 chr15 37123494 37123661 -66371313 + (TTTC)n Simple_repeat Simple_repeat 2 170 0 2 868 1313 86 40 0 chr15 37123661 37123836 -66371138 - B2_Mm2 SINE B2 -12 183 2 2 868 317 347 10 0 chr15 37123851 37123949 -66371025 + ID_B1 SINE B4 78 176 -48 2 868 449 286 9 0 chr15 37123861 37123966 -66371008 + PB1D10 SINE Alu 7 112 -5 2 868 374 234 135 0 chr15 37124056 37124167 -66370807 + B1_Mus1 SINE Alu 3 128 -20 2 868 769 238 21 16 chr15 37124814 37125006 -66369968 + B3A SINE B2 2 194 -4 2 868 1125 144 0 31 chr15 37125009 37125202 -66369772 - B2_Mm2 SINE B2 -7 188 2 2 868 222 37 0 0 chr15 37125218 37125245 -66369729 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 868 1560 179 107 23 chr15 37125390 37125562 -66369412 - ORR1C2 LTR MaLR 0 384 181 2 868 1295 91 0 33 chr15 37125562 37125744 -66369230 + B2_Mm2 SINE B2 1 176 -19 2 868 1560 179 107 23 chr15 37125744 37125925 -66369049 - ORR1C2 LTR MaLR -204 180 2 2 868 29 0 0 0 chr15 37126059 37126088 -66368886 + AT_rich Low_complexity Low_complexity 1 29 0 2 868 838 100 105 23 chr15 37126088 37126221 -66368753 - B1_Mus1 SINE Alu 0 148 5 2 868 450 0 0 0 chr15 37126714 37126764 -66368210 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 868 375 264 351 0 chr15 37126773 37126921 -66368053 - ID_B1 SINE B4 0 224 25 2 868 470 176 25 8 chr15 37127488 37127608 -66367366 + GA-rich Low_complexity Low_complexity 3 124 0 2 868 272 369 49 0 chr15 37129793 37129915 -66365059 + MIRc SINE MIR 74 201 -67 2 868 226 205 0 0 chr15 37130046 37130085 -66364889 + ID SINE ID 3 41 -183 2 868 216 182 63 127 chr15 37130104 37130167 -66364807 + B1_Mur4 SINE Alu 35 93 -57 2 868 264 30 0 0 chr15 37131244 37131277 -66363697 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2 868 822 157 0 85 chr15 37131704 37131857 -66363117 - B1_Mur4 SINE Alu -8 142 3 2 868 416 295 45 51 chr15 37132215 37132372 -66362602 + RSINE1 SINE B4 2 157 -8 2 868 1041 171 56 10 chr15 37132394 37132589 -66362385 + B3 SINE B2 2 205 -11 2 868 366 287 77 8 chr15 37132641 37132771 -66362203 + ID_B1 SINE B4 86 224 0 2 868 1104 72 0 0 chr15 37133250 37133388 -66361586 + B1_Mus1 SINE Alu 1 138 -10 2 868 396 0 0 0 chr15 37133388 37133432 -66361542 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 2 868 180 125 0 0 chr15 37133666 37133698 -66361276 + (A)n Simple_repeat Simple_repeat 1 32 0 2 868 249 288 0 43 chr15 37133700 37133769 -66361205 - MIR SINE MIR -88 174 109 2 868 874 166 7 7 chr15 37133770 37133916 -66361058 - B1_Mus2 SINE Alu -1 146 1 2 868 364 184 26 0 chr15 37133923 37133999 -66360975 - Lx9 LINE L1 -165 7479 7402 2 868 321 225 152 29 chr15 37134288 37134393 -66360581 - ID_B1 SINE B4 -3 221 104 2 868 501 259 7 43 chr15 37134394 37134535 -66360439 - B1F1 SINE Alu -13 136 1 2 868 25 0 0 0 chr15 37134636 37134661 -66360313 + AT_rich Low_complexity Low_complexity 1 25 0 2 868 991 120 58 23 chr15 37134680 37134851 -66360123 + B2_Mm2 SINE B2 8 184 -11 2 868 1008 254 92 52 chr15 37135028 37135431 -66359543 + MTD LTR MaLR 1 419 0 2 868 314 237 18 110 chr15 37135971 37136080 -66358894 + MER5B DNA MER1_type 5 103 -75 2 868 236 320 93 0 chr15 37136345 37136442 -66358532 - MER91C DNA Tip100 -2 138 33 2 868 206 302 120 8 chr15 37136612 37136729 -66358245 - L2b LINE L2 -214 3161 3032 2 868 580 255 132 5 chr15 37138348 37138537 -66356437 + B3 SINE B2 2 214 -2 2 868 224 229 42 0 chr15 37138701 37138749 -66356225 + ID4 SINE ID 18 67 -16 2 868 1106 102 0 7 chr15 37138816 37138964 -66356010 + B1_Mus1 SINE Alu 2 148 0 2 868 213 108 0 0 chr15 37138964 37139001 -66355973 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 2 868 189 0 0 0 chr15 37139710 37139731 -66355243 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 868 444 86 0 0 chr15 37139731 37139801 -66355173 + (GA)n Simple_repeat Simple_repeat 2 71 0 2 868 563 55 64 0 chr15 37140013 37140122 -66354852 + (TC)n Simple_repeat Simple_repeat 1 116 0 2 868 409 260 211 5 chr15 37140550 37140689 -66354285 + RSINE1 SINE B4 2 159 -133 3 868 651 199 19 33 chr15 37142218 37142391 -66352583 + B3A SINE B2 53 216 0 3 868 624 195 0 0 chr15 37142408 37142582 -66352392 + (CA)n Simple_repeat Simple_repeat 2 175 0 3 868 301 107 333 35 chr15 37142606 37142720 -66352254 - B2_Mm2 SINE B2 -1 194 47 3 868 1306 75 40 0 chr15 37142767 37142940 -66352034 - B2_Mm2 SINE B2 -14 181 2 3 868 241 251 5 0 chr15 37143008 37143066 -66351908 + PB1D10 SINE Alu 15 75 -74 3 868 285 235 0 0 chr15 37143069 37143137 -66351837 + CT-rich Low_complexity Low_complexity 2 69 0 3 868 720 188 7 21 chr15 37143144 37143285 -66351689 - B1_Mur3 SINE Alu -9 140 2 3 868 918 162 7 0 chr15 37143717 37143865 -66351109 + B1_Mur4 SINE Alu 2 150 0 3 868 291 125 60 40 chr15 37144201 37144301 -66350673 + (TTATA)n Simple_repeat Simple_repeat 1 102 0 3 868 292 89 0 51 chr15 37144483 37144542 -66350432 + (CCCCCT)n Simple_repeat Simple_repeat 1 56 0 3 868 246 352 122 28 chr15 37145989 37146170 -66348804 - MIRb SINE MIR -46 222 25 3 868 803 236 87 11 chr15 37146253 37146437 -66348537 + B3 SINE B2 12 209 -7 3 868 25 31 0 0 chr15 37146453 37146485 -66348489 + AT_rich Low_complexity Low_complexity 1 32 0 3 868 307 246 16 0 chr15 37146493 37146554 -66348420 - RSINE1 SINE B4 -29 136 75 3 868 570 131 121 0 chr15 37146591 37146690 -66348284 + PB1D9 SINE Alu 9 119 -1 3 868 320 269 123 59 chr15 37146715 37146885 -66348089 + L1MB2 LINE L1 5587 5767 -524 3 868 404 208 218 0 chr15 37146894 37146995 -66347979 + RSINE1 SINE B4 4 126 -39 3 868 261 0 0 0 chr15 37147044 37147073 -66347901 + (A)n Simple_repeat Simple_repeat 1 29 0 3 868 463 264 124 60 chr15 37147141 37147460 -66347514 + L1MB2 LINE L1 5770 6129 -54 3 868 638 302 109 29 chr15 37147878 37148154 -66346820 + MER2 DNA MER2_type 10 307 -38 3 868 1031 128 0 0 chr15 37149673 37149821 -66345153 + B1_Mur4 SINE Alu 3 150 0 3 868 324 0 0 0 chr15 37149885 37149921 -66345053 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 868 451 276 109 87 chr15 37149970 37150200 -66344774 - MT2A LTR ERVL 0 533 299 3 868 366 123 0 0 chr15 37150432 37150489 -66344485 + (T)n Simple_repeat Simple_repeat 1 57 0 3 868 976 50 0 0 chr15 37150489 37150609 -66344365 - B1_Mus1 SINE Alu 0 148 29 3 868 955 104 56 0 chr15 37150699 37150843 -66344131 + B2_Mm2 SINE B2 2 153 -42 3 868 219 36 0 0 chr15 37150843 37150871 -66344103 + (CATA)n Simple_repeat Simple_repeat 4 31 0 3 868 1466 53 32 0 chr15 37151057 37151245 -66343729 - B2_Mm2 SINE B2 0 195 2 3 868 402 121 0 0 chr15 37151616 37151682 -66343292 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 868 659 229 16 0 chr15 37152012 37152134 -66342840 + B3 SINE B2 7 130 -86 3 868 1055 67 15 0 chr15 37152194 37152329 -66342645 + B1_Mm SINE Alu 2 138 -9 3 868 237 300 70 35 chr15 37152377 37152491 -66342483 + B4 SINE B4 69 186 -106 3 868 453 173 16 11 chr15 37152401 37152502 -66342472 + B1_Mus1 SINE Alu 6 109 -11 3 868 389 189 26 39 chr15 37153225 37153302 -66341672 - PB1D9 SINE Alu 0 120 45 3 868 560 221 40 91 chr15 37154006 37154205 -66340769 - B2_Mm2 SINE B2 -6 189 1 3 868 752 171 57 7 chr15 37154233 37154374 -66340600 - B1_Mur2 SINE Alu -1 148 1 3 868 364 298 84 159 chr15 37154551 37154778 -66340196 + B3 SINE B2 2 211 -5 3 868 273 163 0 0 chr15 37154814 37154863 -66340111 + T-rich Low_complexity Low_complexity 2 50 0 3 868 799 197 7 0 chr15 37154873 37155020 -66339954 - B1_Mus1 SINE Alu 0 148 1 3 868 1025 138 16 47 chr15 37155029 37155219 -66339755 - B2_Mm2 SINE B2 -3 192 9 3 868 655 199 15 0 chr15 37155257 37155388 -66339586 - B1_Mus1 SINE Alu -15 133 1 3 868 627 51 0 0 chr15 37155447 37155526 -66339448 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 3 868 1238 35 0 20 chr15 37155526 37155663 -66339311 - B1_Mm SINE Alu -9 138 2 3 868 833 181 0 0 chr15 37155703 37155836 -66339138 - B1_Mur1 SINE Alu -15 134 2 3 868 1452 44 0 0 chr15 37155878 37156058 -66338916 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 3 868 423 98 0 0 chr15 37156058 37156119 -66338855 + (TCC)n Simple_repeat Simple_repeat 3 63 0 3 868 233 182 36 18 chr15 37156304 37156360 -66338614 + CT-rich Low_complexity Low_complexity 2 58 0 3 868 414 0 0 0 chr15 37156807 37156853 -66338121 + (GA)n Simple_repeat Simple_repeat 1 46 0 3 868 451 299 92 40 chr15 37156912 37157086 -66337888 + MLT1B LTR MaLR 205 387 -3 3 868 249 277 92 0 chr15 37157165 37157230 -66337744 - ID4_ SINE ID -3 80 10 3 868 346 329 0 0 chr15 37157490 37157572 -66337402 - RSINE1 SINE B4 -41 124 43 3 868 455 242 105 32 chr15 37157766 37157890 -66337084 + B1_Mur2 SINE Alu 2 134 -15 3 868 640 176 15 0 chr15 37157892 37158028 -66336946 + GA-rich Low_complexity Low_complexity 2 139 0 3 868 1297 27 0 0 chr15 37158180 37158327 -66336647 - B1_Mm SINE Alu 0 147 1 3 868 721 193 188 0 chr15 37159028 37159209 -66335765 - B3 SINE B2 -1 215 1 3 868 372 250 36 71 chr15 37159383 37159495 -66335479 - B1F1 SINE Alu -12 108 1 3 868 544 280 46 36 chr15 37159692 37159888 -66335086 + MTD LTR MaLR 220 417 -2 3 868 246 282 12 37 chr15 37160922 37161003 -66333971 + B1_Mur1 SINE Alu 71 149 0 3 868 236 0 88 0 chr15 37163229 37163263 -66331711 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 3 868 217 179 70 18 chr15 37164200 37164257 -66330717 + G-rich Low_complexity Low_complexity 5 64 0 3 868 1087 94 12 6 chr15 37165219 37165380 -66329594 + B2_Mm1t SINE B2 18 179 -14 3 868 344 102 19 20 chr15 37165408 37165515 -66329459 + B2_Mm2 SINE B2 47 189 -6 3 868 180 0 0 0 chr15 37165557 37165577 -66329397 + (C)n Simple_repeat Simple_repeat 1 20 0 3 868 403 198 39 55 chr15 37165577 37165694 -66329280 - B1_Mus2 SINE Alu -28 119 4 3 868 249 33 0 0 chr15 37166046 37166076 -66328898 + (TA)n Simple_repeat Simple_repeat 1 30 0 3 868 198 0 0 0 chr15 37166076 37166098 -66328876 + (TG)n Simple_repeat Simple_repeat 2 23 0 3 868 229 222 244 0 chr15 37166131 37166221 -66328753 - RSINE1 SINE B4 -51 114 3 3 868 815 185 0 27 chr15 37166460 37166610 -66328364 + B1_Mus1 SINE Alu 3 148 0 3 868 186 291 113 28 chr15 37167340 37167446 -66327528 - L2a LINE L2 -226 3200 3086 3 868 965 81 81 0 chr15 37167575 37167711 -66327263 + B1_Mus1 SINE Alu 2 148 0 3 868 740 11 0 11 chr15 37168924 37169014 -66325960 + (TTTC)n Simple_repeat Simple_repeat 4 92 0 3 868 293 239 42 0 chr15 37169115 37169186 -66325788 - PB1D10 SINE Alu -14 103 30 3 868 342 248 128 10 chr15 37169502 37169604 -66325370 - B1F SINE Alu 0 149 36 3 868 726 147 62 8 chr15 37169638 37169768 -66325206 - B1_Mur4 SINE Alu 0 150 14 3 868 1067 159 0 11 chr15 37169848 37169866 -66325108 - B2_Mm2 SINE B2 -19 176 160 3 868 294 29 0 0 chr15 37169866 37169901 -66325073 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 3 868 1083 126 6 0 chr15 37169901 37170060 -66324914 - B2_Mm1t SINE B2 -33 160 1 3 868 204 40 0 0 chr15 37170654 37170679 -66324295 + (TC)n Simple_repeat Simple_repeat 1 25 0 3 868 720 123 49 8 chr15 37170819 37170942 -66324032 - B1_Mur3 SINE Alu -13 136 9 3 868 261 0 0 0 chr15 37170945 37170974 -66324000 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 868 918 190 79 10 chr15 37170976 37171178 -66323796 - B3 SINE B2 0 216 1 3 868 228 67 0 0 chr15 37171817 37171847 -66323127 + (TTG)n Simple_repeat Simple_repeat 3 32 0 3 868 216 293 66 13 chr15 37171852 37171928 -66323046 - BC1_Mm scRNA scRNA -72 80 1 3 868 201 250 68 0 chr15 37172600 37172644 -66322330 + MIR3 SINE MIR 125 171 -37 3 868 385 286 12 38 chr15 37173069 37173229 -66321745 + CT-rich Low_complexity Low_complexity 3 158 0 3 868 279 131 0 0 chr15 37173290 37173307 -66321667 + (A)n Simple_repeat Simple_repeat 1 17 0 3 868 1197 75 0 0 chr15 37173307 37173454 -66321520 + B1_Mus2 SINE Alu 1 147 0 3 868 279 131 0 0 chr15 37173454 37173497 -66321477 + (A)n Simple_repeat Simple_repeat 1 43 0 3 868 763 240 298 42 chr15 37173514 37173944 -66321030 + RMER4B LTR ERVK 34 573 -12 3 868 250 314 61 53 chr15 37174279 37174410 -66320564 + B3A SINE B2 67 198 0 3 868 904 119 42 7 chr15 37174584 37174728 -66320246 - B1_Mur4 SINE Alu 0 150 2 3 868 466 272 150 13 chr15 37174867 37175020 -66319954 - B3A SINE B2 -24 174 1 3 868 351 287 53 0 chr15 37175032 37175126 -66319848 - PB1D10 SINE Alu -3 114 16 3 868 22 80 0 0 chr15 37175132 37175182 -66319792 + AT_rich Low_complexity Low_complexity 1 50 0 3 868 1167 75 0 0 chr15 37175274 37175421 -66319553 + B1_Mm SINE Alu 1 147 0 3 868 893 137 15 0 chr15 37175460 37175591 -66319383 + B1_Mur4 SINE Alu 6 138 -12 3 868 890 89 73 0 chr15 37175883 37176007 -66318967 + B1_Mus1 SINE Alu 10 142 -6 3 868 1428 64 21 5 chr15 37176284 37176473 -66318501 - B2_Mm2 SINE B2 -3 192 1 3 868 787 165 108 86 chr15 37177301 37177487 -66317487 + B3A SINE B2 2 191 -7 3 868 2058 119 13 3 chr15 37177522 37177833 -66317141 - ORR1A3 LTR MaLR -9 317 4 3 868 454 196 75 61 chr15 37177867 37178014 -66316960 - B1F2 SINE Alu 0 149 1 4 868 532 200 7 7 chr15 37178061 37178197 -66316777 + (TA)n Simple_repeat Simple_repeat 1 136 0 4 868 662 309 24 37 chr15 37178197 37178493 -66316481 - B4A SINE B4 0 292 1 4 868 291 348 52 9 chr15 37178602 37178669 -66316305 - ID_B1 SINE B4 -20 204 136 4 868 1535 72 0 5 chr15 37178669 37178864 -66316110 - B2_Mm2 SINE B2 0 195 2 4 868 291 348 52 9 chr15 37178864 37178912 -66316062 - ID_B1 SINE B4 -89 135 85 4 868 911 143 29 0 chr15 37179171 37179311 -66315663 - B1_Mur4 SINE Alu -5 145 2 4 868 327 49 0 0 chr15 37179363 37179404 -66315570 + (TCCC)n Simple_repeat Simple_repeat 4 44 0 4 868 413 281 70 49 chr15 37180059 37180201 -66314773 + RSINE1 SINE B4 4 148 -17 4 868 323 214 0 125 chr15 37180348 37180427 -66314547 - PB1D7 SINE Alu -8 112 44 4 868 872 232 137 210 chr15 37180427 37180507 -66314467 + MTD LTR MaLR 3 67 -352 4 868 941 116 51 0 chr15 37180507 37180645 -66314329 + B1_Mus2 SINE Alu 1 145 -2 4 868 872 232 137 210 chr15 37180645 37180958 -66314016 + MTD LTR MaLR 68 362 -57 4 868 1102 81 0 20 chr15 37180958 37181109 -66313865 - B1_Mus1 SINE Alu 0 148 1 4 868 872 232 137 210 chr15 37181109 37181161 -66313813 + MTD LTR MaLR 363 416 -3 4 868 181 182 0 0 chr15 37181161 37181194 -66313780 + L3 LINE CR1 901 933 -3556 4 868 209 212 0 43 chr15 37181893 37181914 -66313060 + T-rich Low_complexity Low_complexity 48 67 0 4 868 1241 41 0 0 chr15 37181914 37182061 -66312913 - B1_Mm SINE Alu 0 147 1 4 868 209 212 0 43 chr15 37182061 37182108 -66312866 + T-rich Low_complexity Low_complexity 2 47 0 4 868 225 200 0 91 chr15 37182671 37182748 -66312226 - ID_B1 SINE B4 -72 152 83 4 868 615 250 39 34 chr15 37182805 37182983 -66311991 + B3 SINE B2 1 179 -37 4 868 243 276 75 33 chr15 37183091 37183211 -66311763 - MLT1B LTR MaLR -19 371 247 4 868 681 229 109 44 chr15 37183338 37183351 -66311623 - B3A SINE B2 -3 195 186 4 868 297 0 0 0 chr15 37183351 37183384 -66311590 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 4 868 1274 70 11 2 chr15 37183384 37183553 -66311421 - B2_Mm1t SINE B2 -13 185 1 4 868 431 194 202 10 chr15 37183772 37183876 -66311098 - B1_Mur1 SINE Alu 0 149 26 4 868 547 174 119 0 chr15 37183907 37184016 -66310958 + B1_Mur4 SINE Alu 9 130 -20 4 868 864 254 39 0 chr15 37184024 37184229 -66310745 - B3 SINE B2 -3 213 1 4 868 230 349 0 0 chr15 37184348 37184414 -66310560 - ID4 SINE ID -17 66 1 4 868 229 237 81 41 chr15 37184440 37184540 -66310434 + MIRm SINE MIR 84 184 -84 4 868 915 98 0 0 chr15 37184930 37185062 -66309912 + (TC)n Simple_repeat Simple_repeat 1 132 0 4 868 513 0 0 0 chr15 37185062 37185118 -66309856 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 868 267 328 62 18 chr15 37185288 37185430 -66309544 - LTR16B2 LTR ERVL 0 480 338 4 868 287 305 19 38 chr15 37185732 37185889 -66309085 + CT-rich Low_complexity Low_complexity 3 156 0 4 868 248 191 32 0 chr15 37186210 37186273 -66308701 + CT-rich Low_complexity Low_complexity 4 68 0 4 868 252 0 0 0 chr15 37186279 37186307 -66308667 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 868 380 310 35 76 chr15 37186859 37187030 -66307944 - RSINE1 SINE B4 0 165 2 4 868 205 29 29 29 chr15 37187554 37187589 -66307385 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 868 344 308 132 27 chr15 37187621 37187841 -66307133 - MLT2B2 LTR ERVL 0 562 320 4 868 483 18 0 0 chr15 37188555 37188611 -66306363 + (TC)n Simple_repeat Simple_repeat 1 56 0 4 868 225 0 0 0 chr15 37188611 37188636 -66306338 + (TCC)n Simple_repeat Simple_repeat 1 25 0 4 868 306 143 16 125 chr15 37188655 37188719 -66306255 - B1_Mus2 SINE Alu -17 130 74 4 868 1171 61 0 13 chr15 37189571 37189720 -66305254 + B1_Mus2 SINE Alu 1 147 0 4 868 249 33 0 0 chr15 37189930 37189960 -66305014 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 868 444 288 27 0 chr15 37190318 37190429 -66304545 + RSINE1 SINE B4 3 116 -49 4 868 416 365 45 6 chr15 37190847 37191026 -66303948 - LTR16B2 LTR ERVL -236 226 41 4 868 183 42 0 0 chr15 37191229 37191253 -66303721 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 4 868 202 143 0 28 chr15 37191412 37191448 -66303526 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 4 868 340 294 19 10 chr15 37191721 37191824 -66303150 + MIR3 SINE MIR 94 197 -11 4 868 606 168 176 0 chr15 37191989 37192108 -66302866 + B1_Mur3 SINE Alu 1 140 -9 4 868 253 220 0 17 chr15 37192913 37192973 -66302001 - L1MD3 LINE L1 -530 7465 7407 4 868 227 173 19 0 chr15 37193281 37193333 -66301641 + C-rich Low_complexity Low_complexity 5 57 0 4 868 212 267 0 0 chr15 37193335 37193380 -66301594 + CT-rich Low_complexity Low_complexity 2 46 0 4 868 1023 78 35 0 chr15 37193429 37193570 -66301404 - B1_Mm SINE Alu -1 146 1 4 868 750 140 29 52 chr15 37193583 37193719 -66301255 - B1_Mus2 SINE Alu -12 135 3 4 868 210 37 0 0 chr15 37193892 37193919 -66301055 + (TTG)n Simple_repeat Simple_repeat 1 27 0 4 868 2156 159 29 8 chr15 37193981 37194356 -66300618 + ORR1C2 LTR MaLR 1 383 -1 4 868 747 108 0 0 chr15 37195199 37195310 -66299664 + (TCTCC)n Simple_repeat Simple_repeat 5 115 0 4 868 1041 61 15 0 chr15 37195310 37195442 -66299532 - B1_Mus1 SINE Alu -13 135 2 4 868 573 15 0 0 chr15 37196058 37196124 -66298850 + (GA)n Simple_repeat Simple_repeat 1 66 0 4 868 805 137 61 61 chr15 37196854 37196988 -66297986 + B1_Mus1 SINE Alu 1 135 -13 4 868 357 43 0 0 chr15 37196988 37197035 -66297939 + (CAAA)n Simple_repeat Simple_repeat 1 47 0 4 868 805 137 61 61 chr15 37197035 37197048 -66297926 + B1_Mus1 SINE Alu 136 148 0 4 868 813 154 27 34 chr15 37198256 37198404 -66296570 - B1_Mur3 SINE Alu 0 149 3 4 868 2438 118 39 16 chr15 37199522 37199909 -66295065 + MTB_Mm LTR MaLR 1 396 -11 4 868 725 235 40 65 chr15 37199933 37200133 -66294841 - B3A SINE B2 -3 195 1 4 868 252 253 0 67 chr15 37200717 37200812 -66294162 - B3A SINE B2 -28 188 102 4 868 271 0 0 49 chr15 37201092 37201133 -66293841 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 868 1180 51 0 0 chr15 37201133 37201271 -66293703 - B1_Mm SINE Alu -9 138 1 4 868 1249 109 16 5 chr15 37201802 37201987 -66292987 - B2_Mm1t SINE B2 -6 187 1 4 868 22 0 0 0 chr15 37201988 37202010 -66292964 + AT_rich Low_complexity Low_complexity 1 22 0 4 868 369 0 0 0 chr15 37202239 37202280 -66292694 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 868 747 221 0 13 chr15 37202867 37203018 -66291956 - B1_Mur3 SINE Alu 0 149 1 4 868 1206 56 0 0 chr15 37203362 37203504 -66291470 + B1_Mus2 SINE Alu 1 142 -5 4 868 243 0 0 0 chr15 37203804 37203831 -66291143 + (A)n Simple_repeat Simple_repeat 1 27 0 4 868 752 227 7 0 chr15 37204531 37204672 -66290302 + B1_Mur2 SINE Alu 1 142 -7 4 868 680 242 60 5 chr15 37204693 37204892 -66290082 + B3 SINE B2 5 214 -2 4 868 219 114 0 0 chr15 37206805 37206840 -66288134 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 868 572 244 29 29 chr15 37207183 37207322 -66287652 - B1F SINE Alu -3 146 8 4 868 1219 57 102 6 chr15 37207481 37207657 -66287317 + B2_Mm2 SINE B2 2 194 -1 4 868 801 143 15 29 chr15 37207671 37207808 -66287166 + B1_Mur3 SINE Alu 14 148 -1 4 868 461 181 117 0 chr15 37208110 37208204 -66286770 - PB1D9 SINE Alu -1 119 15 4 868 1104 45 0 0 chr15 37208405 37208537 -66286437 - B1_Mus1 SINE Alu -16 132 1 4 868 188 200 89 0 chr15 37208548 37208593 -66286381 - L3 LINE CR1 -2292 2197 2149 4 868 207 0 0 0 chr15 37208612 37208635 -66286339 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 4 868 300 53 0 0 chr15 37208818 37208856 -66286118 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 4 868 843 141 269 6 chr15 37208856 37209017 -66285957 - B3 SINE B2 -9 207 1 4 868 381 309 133 40 chr15 37210065 37210732 -66284242 - L1ME1 LINE L1 -180 5999 5271 4 868 267 103 0 0 chr15 37210910 37210949 -66284025 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 868 625 202 108 8 chr15 37211101 37211231 -66283743 - B1_Mur2 SINE Alu -6 143 1 4 868 735 114 122 58 chr15 37211290 37211429 -66283545 - B1_Mur4 SINE Alu 0 150 3 4 868 414 0 0 0 chr15 37211429 37211475 -66283499 + (TTA)n Simple_repeat Simple_repeat 2 47 0 4 868 630 254 70 26 chr15 37211481 37211634 -66283340 - RSINE1 SINE B4 0 165 6 4 868 1595 26 10 5 chr15 37212176 37212368 -66282606 - B2_Mm1a SINE B2 0 193 1 4 868 218 200 218 0 chr15 37213481 37213536 -66281438 - ID4_ SINE ID -14 69 3 4 868 441 0 0 0 chr15 37213541 37213590 -66281384 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 4 868 1081 111 19 91 chr15 37213682 37213891 -66281083 - B2_Mm2 SINE B2 0 195 2 4 868 708 94 57 0 chr15 37214147 37214253 -66280721 + B1_Mus2 SINE Alu 33 144 -3 4 868 1001 70 211 0 chr15 37214364 37214520 -66280454 - B2_Mm2 SINE B2 -5 190 2 4 868 864 147 43 49 chr15 37214978 37215161 -66279813 - B2_Mm2 SINE B2 -2 191 7 4 868 981 108 95 18 chr15 37215164 37215333 -66279641 - B2_Mm2 SINE B2 -9 186 5 4 868 246 62 0 0 chr15 37215348 37215380 -66279594 + (T)n Simple_repeat Simple_repeat 1 32 0 4 868 1443 83 5 0 chr15 37215646 37215838 -66279136 + B2_Mm1t SINE B2 1 193 0 4 868 497 326 34 0 chr15 37216168 37216315 -66278659 - RSINE1 SINE B4 -6 159 8 4 868 195 42 0 0 chr15 37216357 37216381 -66278593 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 868 1209 134 52 38 chr15 37217093 37217303 -66277671 - B3 SINE B2 -3 213 1 5 868 244 324 56 0 chr15 37217405 37217476 -66277498 - MER58A DNA MER1_type -149 75 1 5 868 414 0 0 0 chr15 37219178 37219224 -66275750 + (TAA)n Simple_repeat Simple_repeat 1 46 0 5 868 532 254 29 43 chr15 37219736 37219876 -66275098 + B1_Mm SINE Alu 3 140 -7 5 868 441 0 0 0 chr15 37219876 37219925 -66275049 + (TC)n Simple_repeat Simple_repeat 1 49 0 5 868 486 0 0 0 chr15 37219925 37219978 -66274996 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 868 183 42 0 0 chr15 37219983 37220007 -66274967 + (CAA)n Simple_repeat Simple_repeat 1 24 0 5 868 26 30 0 0 chr15 37220249 37220282 -66274692 + AT_rich Low_complexity Low_complexity 1 33 0 5 868 1337 50 52 67 chr15 37220286 37220480 -66274494 - B2_Mm2 SINE B2 -3 192 2 5 868 429 297 39 51 chr15 37220914 37221070 -66273904 - RSINE1 SINE B4 -1 164 11 5 868 587 142 132 9 chr15 37221107 37221221 -66273753 - B1_Mus2 SINE Alu -19 128 1 5 868 35 41 0 0 chr15 37221652 37221701 -66273273 + AT_rich Low_complexity Low_complexity 1 49 0 5 868 234 368 96 32 chr15 37222228 37222385 -66272589 - LTR33A LTR ERVL -329 191 25 5 868 538 187 28 55 chr15 37223472 37223653 -66271321 + RMER17C LTR ERVK 102 277 -133 5 868 349 292 54 78 chr15 37223688 37223855 -66271119 - RSINE1 SINE B4 0 165 3 5 868 672 203 33 59 chr15 37223867 37224019 -66270955 - B1_Mur2 SINE Alu 0 149 2 5 868 293 250 17 133 chr15 37223916 37224036 -66270938 - MT2B LTR ERVL -344 257 152 5 869 302 356 50 25 chr15 37224647 37224846 -66270128 + L2a LINE L2 3204 3407 -19 5 869 1036 71 14 7 chr15 37225000 37225141 -66269833 + B1_Mur4 SINE Alu 9 150 0 5 869 221 340 70 0 chr15 37225807 37225907 -66269067 - L2b LINE L2 0 3375 3269 5 869 747 62 0 0 chr15 37227309 37227406 -66267568 + (TTCC)n Simple_repeat Simple_repeat 4 100 0 5 869 1340 55 7 0 chr15 37227413 37227688 -66267286 + (TTTC)n Simple_repeat Simple_repeat 1 277 0 5 869 780 201 8 0 chr15 37227689 37227823 -66267151 - B1_Mus1 SINE Alu -8 140 6 5 869 317 302 98 28 chr15 37229325 37229468 -66265506 + L2c LINE L2 3219 3371 -16 5 869 499 74 25 0 chr15 37229607 37229688 -66265286 + (GGGA)n Simple_repeat Simple_repeat 3 85 0 5 869 341 321 122 84 chr15 37229713 37229975 -66264999 - B4 SINE B4 -19 273 2 5 869 1610 100 127 67 chr15 37232368 37232667 -66262307 - ORR1A4 LTR MaLR -8 321 5 5 869 315 0 0 0 chr15 37233405 37233440 -66261534 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 869 21 0 0 0 chr15 37234166 37234187 -66260787 + AT_rich Low_complexity Low_complexity 1 21 0 5 869 263 332 126 45 chr15 37234822 37235021 -66259953 + MIRb SINE MIR 17 231 -37 5 869 448 215 11 11 chr15 37236769 37236863 -66258111 + PB1D9 SINE Alu 1 94 -26 5 869 331 280 109 27 chr15 37237488 37237598 -66257376 + PB1D9 SINE Alu 2 120 0 5 869 423 0 0 0 chr15 37237608 37237655 -66257319 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 5 869 1089 103 67 33 chr15 37237856 37238036 -66256938 - B2_Mm2 SINE B2 -9 186 1 5 869 459 155 0 0 chr15 37238311 37238382 -66256592 + tRNA-Ala-GCA tRNA tRNA 3 73 -2 5 869 197 146 21 0 chr15 37238754 37238802 -66256172 + (TATG)n Simple_repeat Simple_repeat 3 51 0 5 869 274 385 0 0 chr15 37241193 37241310 -66253664 + (TG)n Simple_repeat Simple_repeat 2 118 0 5 869 480 48 0 0 chr15 37241999 37242062 -66252912 + (TC)n Simple_repeat Simple_repeat 1 63 0 5 869 405 0 0 0 chr15 37242068 37242113 -66252861 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 869 313 127 108 31 chr15 37242472 37242537 -66252437 - ID4 SINE ID -11 72 3 5 869 423 52 0 0 chr15 37242696 37242754 -66252220 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 869 529 232 0 35 chr15 37243091 37243207 -66251767 - PB1D7 SINE Alu -8 112 1 5 869 411 145 0 0 chr15 37243910 37243979 -66250995 + (TTA)n Simple_repeat Simple_repeat 1 69 0 5 869 343 319 89 58 chr15 37243982 37244258 -66250716 - B4A SINE B4 -18 274 27 5 869 189 0 0 0 chr15 37244284 37244305 -66250669 + (T)n Simple_repeat Simple_repeat 1 21 0 5 869 884 148 0 15 chr15 37244330 37244467 -66250507 + B1_Mus1 SINE Alu 5 139 -9 5 869 634 222 39 31 chr15 37245685 37245804 -66249170 + RSINE1 SINE B4 3 124 -41 5 869 270 0 0 0 chr15 37245804 37245834 -66249140 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 869 834 60 0 0 chr15 37246499 37246616 -66248358 + (TG)n Simple_repeat Simple_repeat 1 117 0 5 869 673 236 0 8 chr15 37246616 37246744 -66248230 - B3A SINE B2 -66 132 6 5 869 452 310 21 8 chr15 37246803 37246940 -66248034 - ID_B1 SINE B4 -110 182 42 5 869 849 232 22 79 chr15 37246940 37247169 -66247805 + B3 SINE B2 1 216 0 5 869 262 340 49 56 chr15 37247169 37247193 -66247781 - B4 SINE B4 -251 41 22 5 869 249 327 83 12 chr15 37247996 37248173 -66246801 - MIR SINE MIR -1 261 67 5 869 27 0 0 0 chr15 37248436 37248463 -66246511 + AT_rich Low_complexity Low_complexity 1 27 0 5 869 1136 69 14 0 chr15 37248780 37248924 -66246050 + B1_Mus1 SINE Alu 3 148 0 5 869 3114 63 5 10 chr15 37249284 37249682 -66245292 - MTA_Mm LTR MaLR 0 396 1 5 869 300 323 89 0 chr15 37249736 37249860 -66245114 + ID_B1 SINE B4 5 139 -85 5 869 588 29 0 0 chr15 37249860 37249930 -66245044 + (GGA)n Simple_repeat Simple_repeat 1 70 0 5 869 728 134 0 63 chr15 37250560 37250751 -66244223 + CT-rich Low_complexity Low_complexity 1 179 0 5 869 596 176 28 0 chr15 37252437 37252545 -66242429 + B1_Mur2 SINE Alu 26 136 -13 5 869 360 152 0 0 chr15 37252550 37252616 -66242358 + GA-rich Low_complexity Low_complexity 3 68 0 5 869 204 150 0 24 chr15 37255145 37255186 -66239788 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 5 869 482 252 7 59 chr15 37255381 37255533 -66239441 + B1F SINE Alu 5 148 -1 5 869 180 0 0 0 chr15 37256000 37256020 -66238954 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 5 869 884 102 0 15 chr15 37256020 37256150 -66238824 - B1_Mus1 SINE Alu -3 145 18 5 869 405 180 88 112 chr15 37256051 37256176 -66238798 - MT2B LTR ERVL -336 265 144 5 869 554 277 73 73 chr15 37256294 37256594 -66238380 - ORR1E LTR MaLR -5 354 55 5 869 363 258 22 0 chr15 37256910 37256999 -66237975 - PB1D10 SINE Alu -14 103 13 5 869 677 214 112 27 chr15 37257496 37257683 -66237291 - B3 SINE B2 -6 210 8 5 869 543 293 118 25 chr15 37258406 37258651 -66236323 - MLT1A LTR MaLR 0 374 107 5 869 185 65 32 0 chr15 37259297 37259328 -66235646 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 869 651 181 18 2 chr15 37259435 37259563 -66235411 + B1_Mur2 SINE Alu 9 137 -12 5 869 204 125 0 0 chr15 37259563 37259595 -66235379 + (GGGA)n Simple_repeat Simple_repeat 2 33 0 5 869 537 332 92 26 chr15 37259997 37260269 -66234705 + B4A SINE B4 3 292 0 5 869 240 35 0 0 chr15 37260784 37260813 -66234161 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 869 1130 72 52 35 chr15 37261495 37261668 -66233306 - B2_Mm2 SINE B2 -18 177 2 5 869 672 257 171 0 chr15 37262684 37262894 -66232080 - ORR1D2 LTR MaLR -19 351 106 5 869 1428 208 150 0 chr15 37262927 37263274 -66231700 - MTD LTR MaLR 0 419 21 5 869 189 74 0 0 chr15 37263277 37263304 -66231670 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 5 869 221 98 98 0 chr15 37264109 37264150 -66230824 + CT-rich Low_complexity Low_complexity 5 49 0 5 869 1391 76 22 0 chr15 37264533 37264717 -66230257 + B2_Mm2 SINE B2 2 189 -6 5 869 235 179 30 0 chr15 37265224 37265291 -66229683 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 869 862 195 45 40 chr15 37268738 37268936 -66226038 - B3 SINE B2 -14 202 4 5 869 198 0 0 0 chr15 37268949 37268971 -66226003 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 869 532 224 56 9 chr15 37269333 37269441 -66225533 - B1_Mur1 SINE Alu -34 115 3 5 869 372 338 142 14 chr15 37269441 37269650 -66225324 + MER58B DNA MER1_type 39 275 -66 5 869 783 349 115 19 chr15 37269790 37270322 -66224652 - L1M5 LINE L1 -2228 3918 3336 5 869 8034 35 13 1 chr15 37270379 37271331 -66223643 - L1Md_F3 LINE L1 -14 6570 5608 5 869 425 278 0 80 chr15 37271359 37271484 -66223490 + PB1D10 SINE Alu 1 115 -2 5 869 514 230 15 0 chr15 37273649 37273784 -66221190 - L1MA5 LINE L1 -2 6298 6162 5 869 268 372 8 42 chr15 37273787 37273905 -66221069 - MIR SINE MIR -114 148 35 5 869 279 54 0 0 chr15 37276216 37276253 -66218721 + (T)n Simple_repeat Simple_repeat 1 37 0 5 869 293 388 13 38 chr15 37277027 37277185 -66217789 + L2b LINE L2 3222 3375 0 5 869 186 133 0 0 chr15 37278194 37278224 -66216750 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 5 869 1290 76 41 0 chr15 37278263 37278434 -66216540 - B2_Mm2 SINE B2 -15 180 3 5 869 373 254 41 88 chr15 37278615 37278809 -66216165 - L1MB5 LINE L1 -346 5828 5644 5 869 239 273 203 0 chr15 37278807 37278935 -66216039 + L1MB5 LINE L1 5951 6104 -70 5 869 413 312 12 65 chr15 37279176 37279317 -66215657 - ID_B1 SINE B4 -1 223 89 5 869 594 75 0 0 chr15 37279317 37279397 -66215577 + (CCA)n Simple_repeat Simple_repeat 2 81 0 5 869 413 312 12 65 chr15 37279397 37279423 -66215551 - ID SINE ID -136 88 65 5 869 441 36 0 0 chr15 37279466 37279521 -66215453 + (TATG)n Simple_repeat Simple_repeat 2 56 0 5 869 823 188 0 20 chr15 37279526 37279673 -66215301 - B1_Mur4 SINE Alu -6 144 1 5 869 1183 35 7 7 chr15 37279764 37279907 -66215067 + B1_Mus2 SINE Alu 5 147 0 6 869 243 291 117 85 chr15 37280052 37280146 -66214828 - PB1D10 SINE Alu -19 98 2 6 869 296 252 47 8 chr15 37280833 37280926 -66214048 + (TA)n Simple_repeat Simple_repeat 1 98 0 6 869 335 291 272 4 chr15 37280926 37281198 -66213776 - MER2 DNA MER2_type 0 345 1 6 869 296 252 47 8 chr15 37281198 37281232 -66213742 + (TA)n Simple_repeat Simple_repeat 2 36 0 6 869 282 116 0 0 chr15 37281234 37281277 -66213697 + (CATA)n Simple_repeat Simple_repeat 2 44 0 6 869 209 294 192 27 chr15 37281353 37281515 -66213459 + MIRb SINE MIR 12 203 -65 6 869 210 37 0 0 chr15 37283096 37283123 -66211851 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 869 221 284 30 0 chr15 37283566 37283633 -66211341 - B4A SINE B4 -221 71 3 6 869 401 81 68 0 chr15 37284016 37284090 -66210884 - RMER4B LTR ERVK -506 79 1 6 869 406 278 108 41 chr15 37284366 37284678 -66210296 + MTD LTR MaLR 1 405 -14 6 869 275 267 70 62 chr15 37284853 37284981 -66209993 - MIRc SINE MIR -49 219 91 6 869 373 284 17 17 chr15 37285818 37285936 -66209038 - RSINE1 SINE B4 -31 134 17 6 869 356 233 23 0 chr15 37286834 37286920 -66208054 - B3A SINE B2 -3 195 108 6 869 240 287 113 0 chr15 37287406 37287521 -66207453 - B1F1 SINE Alu -21 128 1 6 869 257 206 48 27 chr15 37287521 37287591 -66207383 - B1F2 SINE Alu -71 78 1 6 869 1165 88 0 0 chr15 37288826 37288997 -66205977 - B2_Mm2 SINE B2 -23 172 2 6 869 1193 28 21 0 chr15 37289308 37289452 -66205522 - B1_Mus1 SINE Alu 0 148 2 6 869 479 270 184 0 chr15 37289663 37289815 -66205159 + B3 SINE B2 37 216 0 6 869 195 315 116 9 chr15 37290026 37290138 -66204836 + MIRb SINE MIR 45 168 -100 6 869 227 293 0 0 chr15 37290245 37290303 -66204671 + MIR3 SINE MIR 108 165 -43 6 869 286 279 69 11 chr15 37294799 37294886 -66200088 - Lx8 LINE L1 -233 7240 7149 6 869 1004 121 0 13 chr15 37295618 37295769 -66199205 - B1_Mur4 SINE Alu -1 149 1 6 869 252 0 0 0 chr15 37297959 37297987 -66196987 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 6 869 230 98 0 47 chr15 37299205 37299248 -66195726 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 6 869 552 306 0 27 chr15 37300559 37300707 -66194267 + RSINE1 SINE B4 2 145 -20 6 869 498 254 39 0 chr15 37300775 37300905 -66194069 + B3A SINE B2 3 137 -61 6 869 555 246 77 6 chr15 37301063 37301231 -66193743 + MER53 DNA hAT 11 190 -3 6 869 4819 171 49 25 chr15 37302133 37303115 -66191859 + MYSERV6-int LTR ERVK 7901 8905 -54 6 869 1004 246 39 15 chr15 37303201 37303536 -66191438 + RLTR15 LTR ERVK 1 343 -16 6 869 276 154 0 0 chr15 37303870 37303922 -66191052 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 869 2747 52 83 8 chr15 37305692 37306064 -66188910 - MTB LTR MaLR 0 400 1 6 869 7712 70 22 70 chr15 37306064 37307218 -66187756 - MTB-int LTR MaLR 0 1098 1 6 869 1049 43 29 0 chr15 37307218 37307357 -66187617 - MTB LTR MaLR 0 400 258 6 869 1550 21 0 0 chr15 37307342 37307534 -66187440 + MTB LTR MaLR 209 400 0 6 869 288 262 0 0 chr15 37308168 37308229 -66186745 + CT-rich Low_complexity Low_complexity 2 62 0 6 869 788 228 44 8 chr15 37308681 37308874 -66186100 - B3 SINE B2 -1 194 3 6 869 654 165 0 0 chr15 37309267 37309394 -66185580 + CT-rich Low_complexity Low_complexity 1 127 0 6 869 724 324 137 45 chr15 37309420 37310092 -66184882 - Lx8 LINE L1 0 7473 6740 6 869 587 233 8 8 chr15 37310308 37310438 -66184536 - RLTR20B3 LTR ERVK -216 361 232 6 869 897 37 0 0 chr15 37310440 37310549 -66184425 + (TCC)n Simple_repeat Simple_repeat 1 109 0 6 869 738 164 16 0 chr15 37310558 37310686 -66184288 - B1_Mur4 SINE Alu -20 130 1 6 869 1011 59 0 0 chr15 37310719 37310854 -66184120 + B2_Mm2 SINE B2 3 137 -58 6 869 334 229 10 40 chr15 37310932 37311032 -66183942 - MER103 DNA DNA -62 104 8 6 869 597 117 0 0 chr15 37311375 37311402 -66183572 + (A)n Simple_repeat Simple_repeat 1 27 0 6 869 1271 34 0 0 chr15 37311402 37311549 -66183425 + B1_Mus2 SINE Alu 1 147 0 6 869 597 117 0 0 chr15 37311549 37311615 -66183359 + (A)n Simple_repeat Simple_repeat 1 66 0 6 869 1686 284 117 21 chr15 37311935 37312840 -66182134 + L1MEc LINE L1 103 1094 -5306 6 869 1244 250 52 31 chr15 37312934 37313318 -66181656 - RLTR16 LTR ERVK -113 392 1 6 869 5102 44 0 7 chr15 37313934 37314546 -66180428 + L1Md_F2 LINE L1 5963 6570 -12 6 869 204 40 0 0 chr15 37314568 37314593 -66180381 + (CAA)n Simple_repeat Simple_repeat 3 27 0 6 869 186 43 0 0 chr15 37314650 37314673 -66180301 + (GGAA)n Simple_repeat Simple_repeat 3 25 0 6 869 1416 74 26 16 chr15 37314772 37314965 -66180009 - B2_Mm2 SINE B2 0 195 1 6 869 347 284 21 21 chr15 37315010 37315107 -66179867 + MLT1D LTR MaLR 1 97 -408 6 869 285 308 0 0 chr15 37315124 37315189 -66179785 + (CAGAGA)n Simple_repeat Simple_repeat 1 65 0 6 869 531 302 88 29 chr15 37315324 37315563 -66179411 + MLT1D LTR MaLR 253 505 0 6 869 229 268 145 48 chr15 37317599 37317744 -66177230 + L1M5 LINE L1 5504 5662 -578 6 869 1168 68 0 0 chr15 37317791 37317938 -66177036 + B1_Mus1 SINE Alu 2 148 0 6 869 24 0 0 0 chr15 37318248 37318272 -66176702 + AT_rich Low_complexity Low_complexity 1 24 0 6 869 15834 132 28 30 chr15 37318287 37319116 -66175858 + MurERV4-int LTR ERVK 2527 3335 -1925 6 869 1079 99 81 12 chr15 37319116 37319289 -66175685 + B2_Mm2 SINE B2 1 185 -10 6 869 15834 132 28 30 chr15 37319289 37321090 -66173884 + MurERV4-int LTR ERVK 3336 5150 -110 6 869 1874 245 25 41 chr15 37321144 37321658 -66173316 + MYSERV-int LTR ERVK 4570 5075 -1475 6 869 344 268 81 73 chr15 37321667 37321876 -66173098 + RMER4B LTR ERVK 239 550 -35 6 869 4880 180 22 86 chr15 37321922 37323101 -66171873 + MYSERV6-int LTR ERVK 7856 8959 0 6 869 1650 200 145 44 chr15 37323115 37323457 -66171517 + RMER4B LTR ERVK 23 379 -206 6 869 1041 259 65 109 chr15 37323457 37323982 -66170992 - RLTR16 LTR ERVK 0 505 4 6 869 1650 200 145 44 chr15 37323982 37324142 -66170832 + RMER4B LTR ERVK 380 576 -9 6 869 1212 106 0 0 chr15 37324234 37324413 -66170561 + (TCC)n Simple_repeat Simple_repeat 2 180 0 6 869 6462 68 9 0 chr15 37324425 37325237 -66169737 - L1_Mus1 LINE L1 0 6567 5749 6 869 1289 177 188 21 chr15 37325917 37326061 -66168913 + ORR1C2 LTR MaLR 1 174 -210 6 869 207 0 0 0 chr15 37326061 37326084 -66168890 + (TC)n Simple_repeat Simple_repeat 2 24 0 6 869 1289 177 188 21 chr15 37326084 37326268 -66168706 + ORR1C2 LTR MaLR 175 383 -1 6 869 1179 137 0 0 chr15 37327408 37327716 -66167258 + (TGGA)n Simple_repeat Simple_repeat 1 308 0 6 869 241 338 133 6 chr15 37328302 37328460 -66166514 + Tigger5 DNA MER2_type 28 205 -2201 6 869 847 196 55 5 chr15 37328486 37328686 -66166288 - RCHARR1 DNA MER1_type -17 957 748 6 869 1066 301 25 20 chr15 37328683 37329039 -66165935 - RCHARR1 DNA MER1_type -505 469 112 6 869 865 242 18 36 chr15 37329044 37329263 -66165711 - B3 SINE B2 -1 215 1 6 869 300 258 153 10 chr15 37329513 37329611 -66165363 - RCHARR1 DNA MER1_type -845 129 18 6 869 340 227 20 49 chr15 37329673 37329775 -66165199 + Tigger5 DNA MER2_type 2308 2406 0 6 869 711 276 119 62 chr15 37329844 37330268 -66164706 + RMER13A LTR ERVK 2 498 -410 6 869 560 306 38 41 chr15 37330590 37330883 -66164091 - B4A SINE B4 0 292 1 6 869 494 223 157 13 chr15 37331208 37331367 -66163607 - MTD LTR MaLR -14 405 224 6 869 360 261 103 43 chr15 37331378 37331494 -66163480 - MTD LTR MaLR -236 183 61 6 869 3012 24 5 3 chr15 37332060 37332438 -66162536 + MTA_Mm LTR MaLR 16 394 -2 6 869 482 246 68 57 chr15 37332454 37332631 -66162343 - L1MA6 LINE L1 -79 6221 6043 6 869 3950 60 28 2 chr15 37333153 37333652 -66161322 + RLTR1B LTR ERV1 1 512 0 6 869 501 278 99 44 chr15 37334216 37334397 -66160577 + B3A SINE B2 1 191 -7 6 869 438 295 62 150 chr15 37334606 37335025 -66159949 + MLT1A1 LTR MaLR 26 407 -1 6 869 401 314 135 26 chr15 37335035 37335221 -66159753 - MIRc SINE MIR -56 212 19 6 869 415 321 118 14 chr15 37335311 37335608 -66159366 - L2a LINE L2 -5 3421 3094 6 869 192 324 206 61 chr15 37335642 37336267 -66158707 - L2a LINE L2 -441 2978 2263 6 869 825 225 31 5 chr15 37338200 37338392 -66156582 + B3 SINE B2 1 197 -19 6 869 667 275 180 14 chr15 37338902 37339186 -66155788 - MER44A DNA MER2_type -2 337 7 6 869 466 233 13 113 chr15 37339230 37339380 -66155594 + B1_Mur1 SINE Alu 10 144 -5 6 869 494 330 101 39 chr15 37342192 37342498 -66152476 + L2a LINE L2 3102 3426 0 6 869 191 271 174 34 chr15 37342721 37342870 -66152104 - MIRc SINE MIR -37 231 62 6 869 364 322 81 108 chr15 37343491 37343665 -66151309 - ORR1E LTR MaLR 0 359 188 6 869 4021 138 51 8 chr15 37343665 37344298 -66150676 + Lx4B LINE L1 6399 7058 0 6 869 364 322 81 108 chr15 37344298 37344492 -66150482 - ORR1E LTR MaLR -172 187 1 6 869 229 179 286 0 chr15 37345520 37345576 -66149398 + MTC LTR MaLR 1 72 -349 6 869 1186 142 302 0 chr15 37345576 37345851 -66149123 + MTC LTR MaLR 17 374 -47 6 869 730 120 42 76 chr15 37346521 37346665 -66148309 + B1_Mur4 SINE Alu 12 150 0 6 869 235 277 137 55 chr15 37347337 37347520 -66147454 + B3A SINE B2 1 198 0 6 869 2494 191 48 10 chr15 37347660 37348163 -66146811 + MT2A LTR ERVL 12 533 0 6 869 507 174 11 21 chr15 37348343 37348437 -66146537 + B4 SINE B4 1 93 -199 6 869 542 333 43 40 chr15 37348437 37348715 -66146259 + Lx8 LINE L1 7130 7408 -65 6 869 379 378 49 37 chr15 37348779 37349003 -66145971 - MIRb SINE MIR -25 243 10 6 869 239 205 98 98 chr15 37349859 37349951 -66145023 + B1_Mur4 SINE Alu 2 93 -57 6 869 310 284 103 75 chr15 37350300 37350513 -66144461 + MamRep4096 DNA hAT? 5 223 -203 6 869 1047 66 73 0 chr15 37350730 37350867 -66144107 + B1_Mus2 SINE Alu 1 147 0 6 869 253 245 79 30 chr15 37350885 37350986 -66143988 - MIR SINE MIR -57 205 100 6 869 1140 82 0 0 chr15 37353516 37353663 -66141311 + B1_Mus2 SINE Alu 1 147 0 6 869 32 43 0 0 chr15 37353816 37353862 -66141112 + AT_rich Low_complexity Low_complexity 1 46 0 7 869 1133 62 7 0 chr15 37353970 37354115 -66140859 + B1_Mus2 SINE Alu 2 147 0 7 869 309 151 0 0 chr15 37354115 37354168 -66140806 + A-rich Low_complexity Low_complexity 1 53 0 7 869 324 0 0 0 chr15 37354363 37354399 -66140575 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 869 248 297 40 0 chr15 37354708 37354782 -66140192 + ID4 SINE ID 7 83 0 7 869 402 347 83 9 chr15 37354796 37355122 -66139852 + L1MB3 LINE L1 5703 6052 -131 7 870 255 144 63 21 chr15 37355758 37355900 -66139074 + (TA)n Simple_repeat Simple_repeat 2 149 0 7 870 470 176 92 9 chr15 37356374 37356483 -66138491 - PB1D9 SINE Alu 0 120 3 7 870 259 183 92 133 chr15 37356593 37356713 -66138261 + RLTR13C1 LTR ERVK 311 425 -558 7 870 380 231 120 55 chr15 37356704 37356887 -66138087 - MER33 DNA MER1_type -79 245 51 7 870 266 240 53 0 chr15 37357990 37358065 -66136909 + MER94 DNA AcHobo 44 122 -12 7 870 180 0 0 0 chr15 37358475 37358495 -66136479 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 7 870 251 261 89 22 chr15 37358964 37359054 -66135920 + MamGypLTR3 LTR Gypsy 724 819 -20 7 870 303 157 0 0 chr15 37360046 37360097 -66134877 - Lx9 LINE L1 -188 7456 7406 7 870 741 119 111 0 chr15 37360100 37360226 -66134748 - B1_Mur2 SINE Alu -5 144 5 7 870 248 170 0 19 chr15 37361636 37361690 -66133284 + GA-rich Low_complexity Low_complexity 1 53 0 7 870 279 0 0 0 chr15 37363273 37363304 -66131670 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 870 333 0 0 0 chr15 37363884 37363921 -66131053 + (TC)n Simple_repeat Simple_repeat 2 38 0 7 870 580 296 14 14 chr15 37363946 37364090 -66130884 - B4 SINE B4 -2 290 147 7 870 878 296 74 34 chr15 37364203 37364586 -66130388 + MLT2B4 LTR ERVL 1 400 -64 7 870 572 219 6 0 chr15 37364641 37364810 -66130164 + (CA)n Simple_repeat Simple_repeat 2 171 0 7 870 324 0 0 0 chr15 37364829 37364865 -66130109 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 870 1326 245 92 3 chr15 37365317 37365677 -66129297 - MTD LTR MaLR -14 405 14 7 870 264 353 170 21 chr15 37365814 37366002 -66128972 - MIRb SINE MIR -8 260 45 7 870 696 167 82 60 chr15 37366711 37366845 -66128129 + B1_Mur4 SINE Alu 1 137 -13 7 870 516 32 0 0 chr15 37366850 37366912 -66128062 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 7 870 430 224 12 104 chr15 37367522 37367686 -66127288 - Lx7 LINE L1 -23 7673 7525 7 870 193 324 87 35 chr15 37368827 37368942 -66126032 - MIRc SINE MIR -88 180 60 7 870 225 260 94 80 chr15 37368994 37369132 -66125842 + B2_Mm1a SINE B2 15 154 -39 7 870 525 244 38 0 chr15 37369219 37369350 -66125624 + ORR1E LTR MaLR 1 136 -223 7 870 477 172 30 35 chr15 37369402 37369571 -66125403 + GA-rich Low_complexity Low_complexity 2 169 0 7 870 681 220 0 3 chr15 37369583 37369711 -66125263 - B1_Mur1 SINE Alu -20 129 5 7 870 309 125 0 0 chr15 37369711 37369767 -66125207 + (TCC)n Simple_repeat Simple_repeat 2 57 0 7 870 266 280 116 21 chr15 37369788 37369883 -66125091 + ORR1E LTR MaLR 263 366 -13 7 870 393 237 140 0 chr15 37370159 37370252 -66124722 - PB1D10 SINE Alu -9 108 3 7 870 1244 200 0 0 chr15 37371181 37371391 -66123583 - B3 SINE B2 -6 210 1 7 870 4151 55 4 2 chr15 37372606 37373118 -66121856 + L1_Mus3 LINE L1 6126 6638 0 7 870 376 382 22 0 chr15 37373534 37373670 -66121304 - RSINE1 SINE B4 -25 140 2 7 870 201 74 0 0 chr15 37375453 37375480 -66119494 + (CTTTG)n Simple_repeat Simple_repeat 1 27 0 7 870 1169 182 5 32 chr15 37377425 37377646 -66117328 + B3 SINE B2 1 215 -1 7 870 1125 251 66 87 chr15 37378307 37378686 -66116288 - MTE2a LTR MaLR 0 379 9 7 870 1432 157 185 22 chr15 37379870 37380189 -66114785 - ORR1D1 LTR MaLR -3 371 1 7 870 495 33 0 0 chr15 37381595 37381656 -66113318 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 870 994 274 0 44 chr15 37381678 37381949 -66113025 - B4A SINE B4 -21 271 13 7 870 960 316 96 65 chr15 37382158 37382617 -66112357 - MLT1G3 LTR MaLR -95 484 1 7 870 245 270 156 0 chr15 37382662 37382789 -66112185 + MIR SINE MIR 3 147 -121 7 870 210 359 103 37 chr15 37383596 37383732 -66111242 + L2b LINE L2 3253 3425 -1 7 870 1458 275 17 14 chr15 37384109 37384459 -66110515 + MTEa LTR MaLR 1 351 -28 7 870 992 122 7 20 chr15 37384481 37384631 -66110343 - B1_Mur3 SINE Alu 0 149 2 7 870 908 186 26 57 chr15 37384886 37385080 -66109894 - B3A SINE B2 -1 197 10 7 870 858 290 82 53 chr15 37386317 37386696 -66108278 + Charlie4a DNA MER1_type 27 416 -92 7 870 539 304 13 6 chr15 37386785 37386944 -66108030 + Charlie4a DNA MER1_type 349 508 0 7 870 210 143 0 0 chr15 37389047 37389082 -66105892 + (CAG)n Simple_repeat Simple_repeat 1 35 0 7 870 221 244 0 0 chr15 37389261 37389306 -66105668 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 870 273 278 7 0 chr15 37390205 37390357 -66104617 + (CA)n Simple_repeat Simple_repeat 1 153 0 7 870 2987 31 36 0 chr15 37392610 37392970 -66102004 + L1Md_F3 LINE L1 6212 6584 0 7 870 352 303 16 0 chr15 37393056 37393178 -66101796 - MLT1A0 LTR MaLR 0 365 242 7 870 433 273 49 60 chr15 37393230 37393413 -66101561 - B4A SINE B4 -3 289 109 7 870 351 0 0 0 chr15 37393441 37393480 -66101494 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 870 216 0 0 0 chr15 37393572 37393596 -66101378 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 870 207 0 0 0 chr15 37393599 37393622 -66101352 + (CA)n Simple_repeat Simple_repeat 1 23 0 7 870 250 277 179 11 chr15 37394246 37394341 -66100633 + B3A SINE B2 1 111 -87 7 870 36481 48 2 0 chr15 37394814 37399806 -66095168 + L1Md_F3 LINE L1 631 5586 -297 7 870 8442 25 10 0 chr15 37399807 37400780 -66094194 + L1Md_F3 LINE L1 5588 6570 -14 7 870 690 273 34 25 chr15 37400782 37401019 -66093955 + L1_Rod LINE L1 4807 5045 -802 7 870 922 209 194 0 chr15 37401037 37401310 -66093664 + ORR1D1 LTR MaLR 1 326 -48 7 870 514 193 29 9 chr15 37401324 37401444 -66093530 + B1_Mur1 SINE Alu 17 138 -11 7 870 291 203 0 0 chr15 37401524 37401588 -66093386 + (TG)n Simple_repeat Simple_repeat 2 65 0 7 870 1502 293 55 53 chr15 37401667 37403100 -66091874 + L1MDa LINE L1 1498 2936 -3601 7 870 422 225 66 51 chr15 37403401 37403598 -66091376 + L1MDa LINE L1 3151 3350 -3187 7 870 467 97 46 40 chr15 37403646 37403797 -66091177 + (TG)n Simple_repeat Simple_repeat 1 152 0 7 870 871 126 96 0 chr15 37403904 37404039 -66090935 + B1_Mur3 SINE Alu 1 148 -1 7 870 4094 150 40 38 chr15 37404070 37404184 -66090790 - L1_Mm LINE L1 -473 5410 5293 7 870 1142 77 0 0 chr15 37404184 37404327 -66090647 - B1_Mus1 SINE Alu -5 143 1 7 870 4094 150 40 38 chr15 37404327 37404983 -66089991 - L1_Mm LINE L1 -591 5292 4640 7 870 7981 79 10 1 chr15 37404970 37406193 -66088781 + L1_Mus3 LINE L1 5403 6633 -5 7 870 339 291 108 48 chr15 37406434 37406748 -66088226 + L1MDa LINE L1 3749 4081 -2456 7 870 21 0 0 0 chr15 37407042 37407063 -66087911 + AT_rich Low_complexity Low_complexity 1 21 0 7 870 3322 38 2 34 chr15 37407075 37407484 -66087490 - MTA_Mm LTR MaLR 0 396 1 7 870 9051 47 13 0 chr15 37407484 37408568 -66086406 - MTA_Mm-int LTR MaLR 0 1098 1 7 870 3302 46 5 0 chr15 37408568 37408962 -66086012 - MTA_Mm LTR MaLR 0 396 1 7 870 877 278 61 61 chr15 37408985 37409441 -66085533 + L1MDa LINE L1 4565 5020 -1517 7 870 546 43 0 0 chr15 37409550 37409619 -66085355 + (TC)n Simple_repeat Simple_repeat 1 69 0 7 870 400 296 10 87 chr15 37409686 37409882 -66085092 + L1MDa LINE L1 5046 5226 -1311 7 870 220 312 13 13 chr15 37409937 37410015 -66084959 - PB1D10 SINE Alu -1 116 39 7 870 302 291 39 23 chr15 37410207 37410337 -66084637 + L1MDa LINE L1 5249 5380 -1157 7 870 413 261 157 14 chr15 37410649 37410789 -66084185 + MTEa LTR MaLR 13 172 -207 7 870 578 241 110 12 chr15 37410911 37411075 -66083899 - B3A SINE B2 -18 180 1 7 870 186 43 0 0 chr15 37411193 37411216 -66083758 + (TATATG)n Simple_repeat Simple_repeat 2 24 0 7 870 314 254 34 42 chr15 37411314 37411433 -66083541 + L1M4b LINE L1 122 239 -7095 7 870 291 113 0 40 chr15 37411443 37411517 -66083457 + CT-rich Low_complexity Low_complexity 2 72 0 7 870 248 362 121 14 chr15 37411564 37411704 -66083270 + L1M4b LINE L1 285 439 -6895 7 870 520 220 109 43 chr15 37411766 37411904 -66083070 - RSINE1 SINE B4 0 165 19 7 870 333 287 96 0 chr15 37411946 37412061 -66082913 + B1F SINE Alu 23 148 -1 7 870 246 81 0 0 chr15 37412182 37412219 -66082755 + (CAGA)n Simple_repeat Simple_repeat 4 40 0 7 870 601 268 110 25 chr15 37412240 37412558 -66082416 + L1M4b LINE L1 1413 1757 -5577 7 870 1220 11 34 6 chr15 37412598 37412773 -66082201 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 870 294 249 249 32 chr15 37412978 37413167 -66081807 + B4A SINE B4 48 277 -15 7 870 384 22 0 0 chr15 37413177 37413222 -66081752 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 870 394 226 94 0 chr15 37413351 37413457 -66081517 + L1M4b LINE L1 2101 2216 -5118 7 870 937 191 74 74 chr15 37413686 37413732 -66081242 + B3 SINE B2 1 46 -170 7 870 5211 49 13 0 chr15 37413732 37414368 -66080606 - L1Md_F2 LINE L1 0 6582 5939 7 870 937 191 74 74 chr15 37414368 37414536 -66080438 + B3 SINE B2 47 215 -1 7 870 881 205 42 0 chr15 37414705 37414895 -66080079 + B3 SINE B2 13 210 -6 7 870 21 0 0 0 chr15 37414898 37414919 -66080055 + AT_rich Low_complexity Low_complexity 1 21 0 7 870 4498 72 21 15 chr15 37415183 37415792 -66079182 + L1_Mus3 LINE L1 6023 6635 -3 7 870 521 295 60 26 chr15 37415858 37416091 -66078883 + MLT1D LTR MaLR 248 488 -17 7 870 3072 162 75 49 chr15 37416328 37416806 -66078168 - RMER6C LTR ERVK -4 716 333 7 870 459 0 0 0 chr15 37416806 37416857 -66078117 + (TC)n Simple_repeat Simple_repeat 2 52 0 7 870 3072 149 86 24 chr15 37416857 37417212 -66077762 - RMER6C LTR ERVK -320 370 2 7 870 782 203 126 16 chr15 37417376 37417566 -66077408 - B3 SINE B2 -1 215 5 7 870 497 16 16 0 chr15 37418092 37418154 -66076820 + (TC)n Simple_repeat Simple_repeat 2 64 0 7 870 821 174 23 0 chr15 37418157 37418289 -66076685 - B1_Mus1 SINE Alu -12 136 2 7 870 437 181 14 0 chr15 37418304 37418376 -66076598 - tRNA-Gly-GGA tRNA tRNA -2 73 1 7 870 385 339 11 82 chr15 37418703 37418886 -66076088 - B4A SINE B4 -121 171 2 7 870 228 184 0 58 chr15 37419812 37419864 -66075110 - ID2 SINE ID -32 51 3 7 870 401 200 105 0 chr15 37419870 37419965 -66075009 - PB1 SINE Alu -2 125 21 7 870 1036 281 152 32 chr15 37420444 37421163 -66073811 + L1M3 LINE L1 3439 4248 -1898 8 870 980 124 14 14 chr15 37421163 37421310 -66073664 + B1_Mus1 SINE Alu 1 147 -1 8 870 571 307 85 22 chr15 37421310 37421336 -66073638 + L1M3 LINE L1 4249 4275 -1871 8 870 742 269 55 17 chr15 37421514 37421752 -66073222 + L1MC1 LINE L1 4275 4521 -1625 8 870 2491 208 43 47 chr15 37421800 37422466 -66072508 + RCHARR1 DNA MER1_type 189 852 -122 8 870 390 229 24 24 chr15 37423087 37423212 -66071762 + RCHARR1 DNA MER1_type 843 967 -7 8 870 263 255 68 62 chr15 37423219 37423365 -66071609 + L1MC1 LINE L1 4573 4719 -1427 8 870 242 241 37 37 chr15 37423551 37423633 -66071341 + L1MC1 LINE L1 4913 4994 -1152 8 870 262 145 194 0 chr15 37423672 37423734 -66071240 + Lx8 LINE L1 7394 7467 -6 8 870 23 0 0 0 chr15 37423736 37423759 -66071215 + AT_rich Low_complexity Low_complexity 1 23 0 8 870 1012 148 5 11 chr15 37423809 37423994 -66070980 - URR1B DNA MER1_type -5 220 37 8 870 371 315 35 44 chr15 37423994 37424038 -66070936 + CYRA11_Mm Unknown Y-chromosome 176 402 -215 8 870 32 0 0 0 chr15 37424123 37424155 -66070819 + AT_rich Low_complexity Low_complexity 1 32 0 8 870 9551 115 21 8 chr15 37424166 37426031 -66068943 - Lx2 LINE L1 -1 6996 5120 8 870 555 240 67 120 chr15 37426054 37426262 -66068712 + B3A SINE B2 2 198 0 8 870 452 261 159 100 chr15 37426284 37426535 -66068439 + B4A SINE B4 1 266 -26 8 870 240 35 0 0 chr15 37426561 37426590 -66068384 + (CA)n Simple_repeat Simple_repeat 1 29 0 8 870 1094 261 121 20 chr15 37426602 37427272 -66067702 + L1MC1 LINE L1 5169 5907 -426 8 870 459 267 73 11 chr15 37427365 37427543 -66067431 + MER34A LTR ERV1 2 190 -381 8 870 242 256 54 22 chr15 37427779 37427871 -66067103 + L1MC1 LINE L1 6035 6129 -204 8 870 412 285 8 24 chr15 37428042 37428168 -66066806 + B4A SINE B4 3 126 -166 8 870 764 205 13 0 chr15 37428294 37428373 -66066601 + ID SINE ID 1 81 -143 8 870 408 270 30 0 chr15 37428373 37428473 -66066501 + PB1D10 SINE Alu 1 103 -14 8 870 191 62 0 59 chr15 37430000 37430034 -66064940 + (TTG)n Simple_repeat Simple_repeat 2 33 0 8 870 1240 27 0 13 chr15 37430034 37430174 -66064800 - B1_Mus1 SINE Alu -8 140 1 8 870 1193 75 0 0 chr15 37431871 37432018 -66062956 + B1_Mm SINE Alu 1 147 0 8 870 270 0 0 0 chr15 37432018 37432048 -66062926 + (A)n Simple_repeat Simple_repeat 1 30 0 8 870 398 272 126 83 chr15 37432467 37432744 -66062230 + B4A SINE B4 4 292 0 8 870 704 179 0 11 chr15 37432773 37432954 -66062020 + (CA)n Simple_repeat Simple_repeat 2 180 0 8 870 593 263 43 37 chr15 37432978 37433140 -66061834 + RSINE1 SINE B4 3 165 0 8 870 6452 76 80 9 chr15 37433469 37434389 -66060585 + L1_Mus3 LINE L1 5639 6626 -12 8 870 736 166 12 94 chr15 37434427 37434587 -66060387 + B1_Mus1 SINE Alu 2 148 0 8 870 1104 109 0 0 chr15 37434589 37434736 -66060238 + B1_Mus1 SINE Alu 1 147 -1 8 870 232 65 21 42 chr15 37434737 37434785 -66060189 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 8 870 3567 20 2 0 chr15 37434812 37435207 -66059767 - MTA_Mm LTR MaLR 0 396 1 8 870 1555 240 41 18 chr15 37435739 37436130 -66058844 - MTD LTR MaLR -18 401 2 8 870 865 301 37 8 chr15 37436132 37436360 -66058614 + B4A SINE B4 35 269 -23 8 870 294 73 0 0 chr15 37436360 37436401 -66058573 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 870 865 301 37 8 chr15 37436401 37436413 -66058561 + B4A SINE B4 270 281 -11 8 870 614 226 15 0 chr15 37438277 37438410 -66056564 + B1F SINE Alu 9 143 -6 8 870 749 205 0 12 chr15 37438410 37438583 -66056391 + GA-rich Low_complexity Low_complexity 3 173 0 8 870 260 266 0 60 chr15 37439154 37439238 -66055736 - B3A SINE B2 -119 79 1 8 870 529 278 100 16 chr15 37439238 37439423 -66055551 - B4A SINE B4 -63 229 29 8 870 817 265 46 52 chr15 37439968 37440294 -66054680 - ORR1E LTR MaLR -35 324 1 8 870 360 0 0 0 chr15 37440824 37440864 -66054110 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 870 195 125 0 0 chr15 37440872 37440912 -66054062 + (GA)n Simple_repeat Simple_repeat 2 41 0 8 870 368 338 14 103 chr15 37440942 37441120 -66053854 - Charlie7 DNA MER1_type -1467 1145 973 8 870 423 0 0 0 chr15 37441120 37441167 -66053807 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 870 368 338 14 103 chr15 37441167 37441222 -66053752 - Charlie7 DNA MER1_type -1640 972 935 8 870 367 321 46 53 chr15 37441222 37441505 -66053469 - B4A SINE B4 -11 281 1 8 870 368 338 14 103 chr15 37441505 37441639 -66053335 - Charlie7 DNA MER1_type -1678 934 810 8 870 1174 124 11 0 chr15 37442294 37442471 -66052503 + B2_Mm1t SINE B2 1 179 -14 8 870 343 107 13 34 chr15 37442555 37442622 -66052352 + B2_Mm2 SINE B2 46 116 -82 8 870 441 0 0 0 chr15 37442629 37442678 -66052296 + (TA)n Simple_repeat Simple_repeat 1 49 0 8 870 481 262 144 57 chr15 37442703 37442897 -66052077 - B3 SINE B2 -5 211 1 8 870 534 174 0 0 chr15 37443315 37443424 -66051550 + (CA)n Simple_repeat Simple_repeat 2 110 0 8 870 364 274 73 15 chr15 37443428 37443565 -66051409 - RSINE1 SINE B4 -18 147 3 8 870 1461 279 39 42 chr15 37443588 37444070 -66050904 - RMER5 LTR ERV1 -11 523 43 8 870 453 234 0 0 chr15 37444442 37444553 -66050421 + (CCCA)n Simple_repeat Simple_repeat 1 111 0 8 870 666 62 0 0 chr15 37445028 37445124 -66049850 + (CA)n Simple_repeat Simple_repeat 2 97 0 8 870 327 322 101 34 chr15 37446340 37446488 -66048486 - MER5A1 DNA MER1_type -7 159 2 8 870 27 0 0 0 chr15 37446753 37446780 -66048194 + AT_rich Low_complexity Low_complexity 1 27 0 8 870 351 263 0 32 chr15 37447751 37447936 -66047038 + (TG)n Simple_repeat Simple_repeat 2 180 0 8 870 318 291 8 120 chr15 37447970 37448087 -66046887 - B4 SINE B4 -4 288 185 8 870 349 264 122 9 chr15 37448044 37448151 -66046823 - PB1D9 SINE Alu 0 120 2 8 870 252 59 0 0 chr15 37448156 37448190 -66046784 + (TCC)n Simple_repeat Simple_repeat 3 36 0 8 870 243 286 52 0 chr15 37448282 37448359 -66046615 - ID4_ SINE ID -2 81 1 8 870 282 292 14 27 chr15 37448411 37448485 -66046489 - RSINE1 SINE B4 -38 127 55 8 870 245 268 112 10 chr15 37449737 37449835 -66045139 + PB1D10 SINE Alu 3 110 -7 8 870 2504 277 102 42 chr15 37449845 37451115 -66043859 + Lx8 LINE L1 5429 6790 -683 8 870 2149 211 20 5 chr15 37451329 37451734 -66043240 - MTD LTR MaLR -8 411 1 8 870 511 299 124 68 chr15 37454516 37454911 -66040063 - MTD LTR MaLR -2 417 1 8 870 887 317 20 30 chr15 37454920 37455216 -66039758 - MER2 DNA MER2_type -51 294 2 8 870 1220 294 48 56 chr15 37455268 37455805 -66039169 + MT2A LTR ERVL 1 533 0 8 870 318 351 33 20 chr15 37457075 37457226 -66037748 + MLT1L LTR MaLR 94 246 -364 8 870 1104 275 75 20 chr15 37457578 37457927 -66037047 - MLT1B LTR MaLR -13 377 10 8 870 952 224 19 14 chr15 37458812 37459025 -66035949 - MTD LTR MaLR -205 214 1 8 870 3273 11 0 0 chr15 37459493 37459857 -66035117 + L1Md_A LINE L1 6219 6582 0 8 870 1134 57 22 11 chr15 37460239 37460417 -66034557 + (TTC)n Simple_repeat Simple_repeat 1 180 0 8 870 246 128 0 0 chr15 37460421 37460460 -66034514 + (TCC)n Simple_repeat Simple_repeat 3 41 0 8 870 536 300 66 11 chr15 37460473 37460655 -66034319 - B3A SINE B2 -6 192 1 8 870 194 167 0 0 chr15 37460667 37460697 -66034277 - L4 LINE RTE -999 1030 1001 8 870 182 291 71 18 chr15 37461296 37461352 -66033622 - MIR SINE MIR -76 186 128 8 870 310 288 190 21 chr15 37463569 37463711 -66031263 + MIR SINE MIR 33 198 -64 8 870 635 203 32 0 chr15 37465259 37465382 -66029592 + MTEb LTR MaLR 4 130 -249 8 870 1294 243 91 26 chr15 37465696 37466046 -66028928 - MTEb LTR MaLR -6 373 1 8 870 310 326 124 9 chr15 37466210 37466532 -66028442 + HAL1 LINE L1 587 945 -1562 8 870 260 336 39 39 chr15 37466930 37467060 -66027914 + B1F2 SINE Alu 13 142 -7 8 870 258 241 80 36 chr15 37467088 37467200 -66027774 + HAL1 LINE L1 1409 1525 -982 8 870 450 0 0 0 chr15 37468197 37468247 -66026727 + (TG)n Simple_repeat Simple_repeat 1 50 0 8 870 687 305 63 20 chr15 37468281 37468531 -66026443 - B4A SINE B4 -23 269 4 8 870 710 210 35 0 chr15 37468829 37468972 -66026002 + ID_B1 SINE B4 77 224 0 8 870 253 220 32 42 chr15 37468969 37469064 -66025910 + MER63D DNA AcHobo 81 174 -887 8 870 416 361 33 22 chr15 37469062 37469246 -66025728 + MLT1D LTR MaLR 304 489 -16 8 870 240 235 0 0 chr15 37470628 37470683 -66024291 + T-rich Low_complexity Low_complexity 15 69 0 8 870 589 174 278 0 chr15 37470683 37470798 -66024176 - B1_Mus1 SINE Alu -1 147 1 8 870 240 235 0 0 chr15 37470798 37470810 -66024164 + T-rich Low_complexity Low_complexity 3 14 0 8 870 333 0 0 0 chr15 37471343 37471380 -66023594 + (CA)n Simple_repeat Simple_repeat 1 37 0 8 870 1332 60 0 12 chr15 37471416 37472422 -66022552 + (CA)n Simple_repeat Simple_repeat 1 993 0 8 870 275 246 70 102 chr15 37472679 37472835 -66022139 - L2a LINE L2 -213 3174 3022 8 870 200 351 45 38 chr15 37472829 37472962 -66022012 + MER5B DNA MER1_type 40 173 -5 8 870 423 56 0 0 chr15 37473802 37473856 -66021118 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 870 1030 285 152 10 chr15 37473955 37474362 -66020612 + MLT1D LTR MaLR 24 488 -17 8 870 1172 106 6 0 chr15 37474502 37474681 -66020293 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 8 870 297 197 0 0 chr15 37474681 37474742 -66020232 + GA-rich Low_complexity Low_complexity 1 61 0 8 870 468 51 0 0 chr15 37474791 37474850 -66020124 + (CTA)n Simple_repeat Simple_repeat 1 59 0 8 870 779 138 57 0 chr15 37474859 37474982 -66019992 - B1_Mus1 SINE Alu -1 147 18 8 870 317 229 46 138 chr15 37474884 37475036 -66019938 - MT2B LTR ERVL -323 278 141 8 870 817 256 61 5 chr15 37476043 37476207 -66018767 + B3 SINE B2 3 167 -49 8 870 369 0 0 0 chr15 37476207 37476248 -66018726 + (CATA)n Simple_repeat Simple_repeat 4 44 0 8 870 817 256 61 5 chr15 37476248 37476279 -66018695 + B3 SINE B2 168 209 -7 8 870 248 349 12 0 chr15 37477386 37477472 -66017502 + MER113A DNA MER1_type 87 173 -141 8 870 648 170 19 0 chr15 37477555 37477661 -66017313 - B3 SINE B2 -107 109 2 9 870 2912 159 70 2 chr15 37477684 37478170 -66016804 - Lx4B LINE L1 -217 6841 6323 9 870 927 157 0 32 chr15 37478172 37478357 -66016617 + Lx4B LINE L1 6873 7051 -7 9 870 363 324 53 35 chr15 37479437 37479660 -66015314 - MIR SINE MIR -21 241 15 9 870 248 258 30 0 chr15 37479747 37479813 -66015161 + Lx8 LINE L1 6729 6796 -677 9 870 1397 228 73 27 chr15 37479847 37480217 -66014757 + Lx8 LINE L1 6887 7273 -200 9 870 1352 76 32 5 chr15 37480244 37480429 -66014545 - B2_Mm2 SINE B2 -5 190 1 9 870 189 0 0 0 chr15 37480443 37480464 -66014510 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 9 870 1022 125 57 6 chr15 37481231 37481408 -66013566 + ORR1D1 LTR MaLR 1 186 -188 9 870 1099 190 19 0 chr15 37481437 37481706 -66013268 - ORR1D1 LTR MaLR -8 366 1 9 870 598 179 19 9 chr15 37481710 37481817 -66013157 + ORR1D1 LTR MaLR 267 374 0 9 870 3252 181 72 113 chr15 37482105 37482475 -66012499 + RMER17B LTR ERVK 1 413 -545 9 870 870 10 0 0 chr15 37482475 37482574 -66012400 + (TTCTC)n Simple_repeat Simple_repeat 3 101 0 9 870 3252 212 64 96 chr15 37482574 37483226 -66011748 + RMER17B LTR ERVK 414 953 -5 9 870 261 0 0 0 chr15 37483237 37483266 -66011708 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 9 870 347 266 0 0 chr15 37484117 37484196 -66010778 - ID4_ SINE ID -3 80 2 9 108 9316 138 20 37 chr15 37484390 37486762 -66008212 + L1Md_F LINE L1 395 2575 -3308 9 871 3188 60 0 8 chr15 37486763 37487164 -66007810 + L1_Mus2 LINE L1 6165 6562 -4 9 871 227 254 87 29 chr15 37487218 37487287 -66007687 + B4 SINE B4 154 226 -66 9 871 4141 114 44 23 chr15 37487304 37487969 -66007005 - Lx LINE L1 -3 6651 5973 9 871 231 291 24 48 chr15 37489240 37489323 -66005651 - MTEb LTR MaLR -14 365 285 9 871 298 261 14 25 chr15 37489574 37489664 -66005310 + L2a LINE L2 3302 3426 0 9 871 2115 244 70 12 chr15 37490539 37491054 -66003920 - Lx6 LINE L1 -4 7456 6912 9 871 372 214 32 53 chr15 37491558 37491652 -66003322 + PB1D10 SINE Alu 26 117 0 9 871 25 31 0 0 chr15 37492183 37492215 -66002759 + AT_rich Low_complexity Low_complexity 1 32 0 9 871 350 179 56 67 chr15 37492222 37492312 -66002662 - L1MCa LINE L1 -4550 1958 1870 9 871 378 0 0 0 chr15 37493553 37493595 -66001379 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 871 21 0 0 0 chr15 37493642 37493663 -66001311 + AT_rich Low_complexity Low_complexity 1 21 0 9 871 416 244 132 16 chr15 37494940 37495061 -65999913 + ID_B1 SINE B4 81 215 -9 9 871 378 362 118 55 chr15 37495425 37495637 -65999337 + L1M5 LINE L1 4971 5194 -952 9 871 538 296 6 30 chr15 37495637 37495804 -65999170 + RSINE1 SINE B4 2 164 -1 9 871 378 362 118 55 chr15 37495804 37495956 -65999018 + L1M5 LINE L1 5195 5358 -788 9 871 432 0 0 0 chr15 37496381 37496429 -65998545 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 871 455 233 87 0 chr15 37496457 37496560 -65998414 - RSINE1 SINE B4 -25 140 29 9 871 1597 177 3 27 chr15 37496598 37496894 -65998080 + ORR1B2 LTR MaLR 79 367 0 9 871 622 309 91 62 chr15 37496936 37497419 -65997555 - L1MDa LINE L1 -1199 5338 4842 9 871 340 339 30 6 chr15 37497678 37497847 -65997127 - L1MDa LINE L1 -4927 1706 1534 9 871 1920 203 75 7 chr15 37497867 37498256 -65996718 - MTD LTR MaLR -15 404 6 9 871 224 30 30 0 chr15 37499055 37499088 -65995886 + (TG)n Simple_repeat Simple_repeat 1 34 0 9 871 2198 37 0 29 chr15 37499148 37499425 -65995549 - L1Md_F3 LINE L1 0 6584 6316 9 871 693 36 0 0 chr15 37500379 37500463 -65994511 + (TCC)n Simple_repeat Simple_repeat 1 84 0 1 871 369 273 81 11 chr15 37500695 37500869 -65994105 + MER53 DNA hAT 5 190 -3 2 871 718 224 112 20 chr15 37501624 37501820 -65993154 + B3 SINE B2 3 216 0 3 871 228 366 32 0 chr15 37502190 37502283 -65992691 - MER58B DNA MER1_type -21 320 225 4 871 529 274 104 0 chr15 37502662 37502826 -65992148 - MTE2b LTR MaLR -5 374 194 5 871 2623 206 113 26 chr15 37502826 37503554 -65991420 + RMER1B Other Other 101 1053 -13 6 871 597 165 18 18 chr15 37503554 37503721 -65991253 + GA-rich Low_complexity Low_complexity 4 170 0 7 871 692 260 19 24 chr15 37503721 37503930 -65991044 - MTE2b LTR MaLR -171 208 1 5 871 283 250 44 22 chr15 37503930 37503997 -65990977 + MER96B DNA hAT 44 112 -305 8 871 1238 54 0 0 chr15 37504029 37504176 -65990798 - B1_Mus1 SINE Alu 0 148 2 9 871 278 337 0 0 chr15 37504383 37504472 -65990502 + ID_B1 SINE B4 81 169 -55 1 871 365 270 10 29 chr15 37504395 37504498 -65990476 + PB1D10 SINE Alu 12 112 -5 1 871 191 192 64 64 chr15 37504615 37504693 -65990281 + MIRb SINE MIR 24 101 -167 1 871 1540 232 44 33 chr15 37504862 37505228 -65989746 - ORR1D2 LTR MaLR 0 370 1 1 871 320 295 219 5 chr15 37505510 37505711 -65989263 - Tigger5 DNA MER2_type -2162 244 1 1 871 281 354 22 28 chr15 37506018 37506198 -65988776 - MER96B DNA hAT -106 311 133 1 871 872 41 215 0 chr15 37506210 37506331 -65988643 + B1_Mus1 SINE Alu 2 148 0 1 871 294 90 71 18 chr15 37506334 37506447 -65988527 + A-rich Low_complexity Low_complexity 2 120 0 1 871 244 164 15 15 chr15 37507878 37507946 -65987028 + GA-rich Low_complexity Low_complexity 3 70 0 1 871 406 325 53 59 chr15 37511593 37511937 -65983037 + ORR1E LTR MaLR 1 340 -30 1 871 477 216 54 0 chr15 37512062 37512173 -65982801 - PB1D10 SINE Alu 0 117 1 2 871 489 121 32 42 chr15 37512313 37512408 -65982566 - B2_Mm2 SINE B2 -7 188 95 2 871 712 299 118 105 chr15 37512415 37513300 -65981674 - L1MC3 LINE L1 -216 7569 6674 2 871 463 342 7 0 chr15 37513363 37513509 -65981465 + B1F SINE Alu 3 149 0 2 871 222 359 64 37 chr15 37513558 37513804 -65981170 - MIR SINE MIR -14 248 2 2 871 587 82 20 0 chr15 37514544 37514642 -65980332 + (TCTA)n Simple_repeat Simple_repeat 4 103 0 2 871 296 274 24 12 chr15 37514673 37514758 -65980216 + RSINE1 SINE B4 12 97 -68 2 871 924 272 31 26 chr15 37515027 37515297 -65979677 + B4 SINE B4 36 281 -11 2 871 330 272 48 24 chr15 37516809 37516892 -65978082 + RSINE1 SINE B4 81 165 0 2 871 814 256 101 46 chr15 37516960 37517267 -65977707 + MLT1A0 LTR MaLR 2 325 -40 2 871 640 284 52 87 chr15 37517287 37517654 -65977320 - ORR1E LTR MaLR 0 359 6 2 871 435 280 35 7 chr15 37518679 37518823 -65976151 - RSINE1 SINE B4 -13 152 5 3 871 2223 211 28 10 chr15 37519513 37520010 -65974964 - RMER20A LTR ERVK 0 516 11 3 871 3971 147 43 12 chr15 37520696 37521366 -65973608 + RLTR17 LTR ERVK 1 691 -1 3 871 1015 58 0 7 chr15 37521707 37521846 -65973128 - B1_Mus1 SINE Alu 0 148 11 3 871 1931 228 65 113 chr15 37521886 37522880 -65972094 + RMER17B LTR ERVK 1 915 -43 3 871 182 167 0 0 chr15 37522910 37522940 -65972034 - MIRb SINE MIR -183 85 56 3 871 1107 164 301 20 chr15 37524589 37524881 -65970093 - ORR1D1 LTR MaLR 0 374 1 3 871 205 266 0 132 chr15 37525302 37525393 -65969581 + MER5B DNA MER1_type 88 166 -12 3 871 200 438 7 14 chr15 37525815 37525954 -65969020 - L2b LINE L2 -13 3362 3225 3 871 364 264 107 59 chr15 37526174 37526343 -65968631 - ORR1E LTR MaLR -175 184 8 3 871 224 241 0 0 chr15 37527768 37527822 -65967152 + A-rich Low_complexity Low_complexity 1 54 0 4 871 219 23 22 65 chr15 37528062 37528108 -65966866 + (TTTTTG)n Simple_repeat Simple_repeat 2 45 0 4 871 2632 43 65 0 chr15 37528130 37528455 -65966519 + ORR1A1 LTR MaLR 1 346 0 4 871 223 140 20 20 chr15 37528825 37528876 -65966098 + (CTATA)n Simple_repeat Simple_repeat 2 52 0 4 871 338 0 24 0 chr15 37530444 37530486 -65964488 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 4 871 1147 62 0 24 chr15 37530486 37530651 -65964323 - B2_Mm2 SINE B2 -34 161 1 4 871 181 273 226 24 chr15 37531053 37531097 -65963877 - MIR SINE MIR -38 224 176 4 871 564 56 0 0 chr15 37531097 37531169 -65963805 + (TC)n Simple_repeat Simple_repeat 1 72 0 4 871 198 0 0 0 chr15 37531169 37531190 -65963784 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 871 181 273 226 24 chr15 37531190 37531268 -65963706 - MIR SINE MIR -87 175 77 4 871 826 222 113 0 chr15 37531365 37531559 -65963415 + B3 SINE B2 1 216 0 4 871 237 303 0 0 chr15 37532972 37533088 -65961886 + (TG)n Simple_repeat Simple_repeat 1 116 0 5 871 192 353 15 0 chr15 37533484 37533552 -65961422 - L2b LINE L2 -32 3343 3275 5 871 191 298 84 84 chr15 37534559 37534702 -65960272 - L2c LINE L2 0 3387 3245 5 871 1326 189 117 28 chr15 37535491 37535817 -65959157 + ORR1E LTR MaLR 1 355 -4 5 871 1939 111 36 3 chr15 37536805 37537113 -65957861 - ORR1A3 LTR MaLR -8 318 1 5 871 360 111 0 0 chr15 37537136 37537199 -65957775 + (TCTG)n Simple_repeat Simple_repeat 4 66 0 5 871 396 0 0 0 chr15 37537230 37537274 -65957700 + (TATAA)n Simple_repeat Simple_repeat 5 48 0 5 871 777 279 101 10 chr15 37537692 37537989 -65956985 + HAL1 LINE L1 34 357 -2150 5 871 306 67 0 0 chr15 37538169 37538214 -65956760 + (T)n Simple_repeat Simple_repeat 1 45 0 5 871 270 331 11 90 chr15 37538222 37538411 -65956563 + MLT1H LTR MaLR 139 312 -237 5 871 2754 138 35 0 chr15 37538818 37539223 -65955751 + MTC LTR MaLR 3 421 0 6 871 429 20 0 0 chr15 37539936 37539986 -65954988 + (TATG)n Simple_repeat Simple_repeat 2 51 0 6 871 667 279 18 24 chr15 37542217 37542382 -65952592 + RSINE1 SINE B4 2 165 0 6 871 274 264 29 8 chr15 37542422 37542509 -65952465 + ID4 SINE ID 14 99 -53 6 871 187 255 19 19 chr15 37542799 37542851 -65952123 + L2 LINE L2 2817 2868 -551 6 871 393 22 0 0 chr15 37544083 37544129 -65950845 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 871 405 0 0 0 chr15 37544129 37544173 -65950801 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 871 291 190 0 0 chr15 37544215 37544273 -65950701 + GA-rich Low_complexity Low_complexity 3 60 0 6 871 351 132 0 0 chr15 37544839 37544907 -65950067 + (CA)n Simple_repeat Simple_repeat 1 68 0 6 871 21 0 0 0 chr15 37545475 37545496 -65949478 + AT_rich Low_complexity Low_complexity 1 21 0 6 871 633 96 0 0 chr15 37546078 37546172 -65948802 + (GA)n Simple_repeat Simple_repeat 1 94 0 7 871 516 59 0 0 chr15 37546168 37546236 -65948738 + (GGA)n Simple_repeat Simple_repeat 2 69 0 7 871 197 363 29 29 chr15 37547454 37547559 -65947415 + MIR3 SINE MIR 83 187 -21 7 871 190 222 0 0 chr15 37548018 37548054 -65946920 - MIR SINE MIR -194 68 33 7 871 860 289 20 71 chr15 37548209 37548503 -65946471 - B4 SINE B4 -12 280 2 7 871 1357 98 38 0 chr15 37548517 37548701 -65946273 - B2_Mm2 SINE B2 -4 191 1 7 871 546 346 61 9 chr15 37548932 37549276 -65945698 - L1MC4 LINE L1 -443 7599 7238 7 871 295 191 29 73 chr15 37549361 37549429 -65945545 - L1MC4 LINE L1 -1040 7002 6938 7 871 745 267 25 47 chr15 37549625 37549900 -65945074 - RLTR26 LTR ERVK -225 417 149 7 871 189 0 0 0 chr15 37550358 37550379 -65944595 + (CA)n Simple_repeat Simple_repeat 1 21 0 7 871 225 308 55 41 chr15 37550463 37550614 -65944360 + MIR SINE MIR 2 153 -109 7 871 2304 120 28 8 chr15 37550615 37550967 -65944007 + RLTR15 LTR ERVK 1 359 0 8 871 389 240 58 0 chr15 37551276 37551380 -65943594 + PB1D10 SINE Alu 1 110 -7 8 871 205 281 18 0 chr15 37551467 37551524 -65943450 + L2a LINE L2 3353 3410 -16 8 871 1255 148 32 40 chr15 37552371 37552624 -65942350 - RMER17A2 LTR ERVK -655 251 1 8 871 742 211 13 20 chr15 37552625 37552775 -65942199 + B3 SINE B2 67 215 -1 8 871 1189 29 0 0 chr15 37553683 37553819 -65941155 + B1_Mus2 SINE Alu 3 138 -9 8 871 228 35 0 0 chr15 37553819 37553848 -65941126 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8 871 885 169 209 0 chr15 37553861 37554038 -65940936 + B3 SINE B2 3 216 0 8 871 29 28 0 0 chr15 37554038 37554074 -65940900 + AT_rich Low_complexity Low_complexity 1 36 0 8 871 488 285 41 14 chr15 37554403 37554549 -65940425 + RSINE1 SINE B4 2 151 -14 8 871 303 71 0 0 chr15 37554561 37554603 -65940371 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 871 498 268 39 0 chr15 37555497 37555650 -65939324 - B3A SINE B2 -39 159 1 9 871 21 0 0 0 chr15 37555707 37555728 -65939246 + AT_rich Low_complexity Low_complexity 1 21 0 9 871 590 247 2 2 chr15 37556162 37556642 -65938332 + (CA)n Simple_repeat Simple_repeat 1 480 0 9 871 267 54 0 0 chr15 37556647 37556684 -65938290 + (TC)n Simple_repeat Simple_repeat 2 38 0 9 871 403 360 99 12 chr15 37556954 37557207 -65937767 + B4A SINE B4 10 284 -8 9 871 1472 231 154 24 chr15 37557938 37558305 -65936669 - RLTR11A2 LTR ERVK 0 527 96 9 871 269 26 0 26 chr15 37558305 37558344 -65936630 + (CAA)n Simple_repeat Simple_repeat 2 39 0 9 871 1472 231 154 24 chr15 37558344 37558442 -65936532 - RLTR11A2 LTR ERVK -432 95 1 9 871 21 0 0 0 chr15 37558689 37558710 -65936264 + AT_rich Low_complexity Low_complexity 1 21 0 9 871 559 220 119 119 chr15 37558753 37559191 -65935783 + RMER10A LTR ERVL 1 438 -4 9 871 511 136 35 23 chr15 37559342 37559515 -65935459 + (TCTCTG)n Simple_repeat Simple_repeat 6 180 0 1 871 1587 233 64 29 chr15 37560706 37561136 -65933838 + RLTR20C LTR ERVK 1 458 -105 1 871 288 0 0 0 chr15 37561136 37561168 -65933806 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 871 306 0 0 0 chr15 37561168 37561201 -65933773 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 871 1587 225 57 31 chr15 37561201 37561290 -65933684 + RLTR20C LTR ERVK 432 533 -1 1 871 451 252 159 25 chr15 37561709 37561861 -65933113 - MTE2a LTR MaLR -14 365 192 1 871 1518 192 96 3 chr15 37561861 37562196 -65932778 + ORR1D1 LTR MaLR 1 366 -8 1 871 1676 140 111 6 chr15 37562209 37562533 -65932441 - ORR1B2 LTR MaLR -8 359 2 1 871 239 281 0 15 chr15 37562792 37562857 -65932117 + (TG)n Simple_repeat Simple_repeat 2 65 0 1 871 435 230 168 12 chr15 37562992 37563159 -65931815 + ETnERV2-int LTR ERVK 6233 6425 -981 1 871 2196 121 11 40 chr15 37563441 37563811 -65931163 + RLTR9A2 LTR ERVK 1 359 -24 1 871 1344 201 18 98 chr15 37563839 37564236 -65930738 + RLTR31_Mm LTR ERVK 197 561 0 1 871 270 152 68 0 chr15 37564459 37564518 -65930456 - B3 SINE B2 0 216 154 1 871 10134 57 4 0 chr15 37564707 37566672 -65928302 - L1Md_F2 LINE L1 0 6582 4610 1 871 23 54 0 0 chr15 37566679 37566716 -65928258 + AT_rich Low_complexity Low_complexity 1 37 0 1 871 23 54 0 0 chr15 37566869 37566906 -65928068 + AT_rich Low_complexity Low_complexity 1 37 0 1 871 315 253 0 42 chr15 37567587 37567682 -65927292 + PB1D10 SINE Alu 27 117 0 1 871 6384 72 26 9 chr15 37567819 37569451 -65925523 - L1VL2 LINE L1 -1789 1826 165 1 871 405 0 0 0 chr15 37570304 37570349 -65924625 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 871 2212 150 35 10 chr15 37570371 37570533 -65924441 - Lx2A1 LINE L1 -2 7006 6846 1 871 2165 69 131 26 chr15 37570533 37570846 -65924128 + ORR1A1 LTR MaLR 1 346 0 1 871 2212 150 35 10 chr15 37570846 37571088 -65923886 - Lx2A1 LINE L1 -163 6845 6593 1 871 4310 126 21 16 chr15 37571088 37571789 -65923185 + Lx2A1 LINE L1 5714 6418 -590 1 871 466 322 90 54 chr15 37572043 37572522 -65922452 + LTR33 LTR ERVL 20 515 0 1 871 237 245 0 0 chr15 37572733 37572786 -65922188 + L1M2 LINE L1 5707 5759 -538 1 871 510 91 0 0 chr15 37572958 37573035 -65921939 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 871 736 294 38 65 chr15 37573153 37573444 -65921530 + B4A SINE B4 2 284 -8 1 871 307 312 37 49 chr15 37574827 37574989 -65919985 - MIR SINE MIR -32 230 71 1 871 265 344 11 11 chr15 37575104 37575198 -65919776 + L2b LINE L2 3273 3366 -9 1 871 192 77 0 0 chr15 37575318 37575344 -65919630 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 871 747 172 0 0 chr15 37575344 37575466 -65919508 - B1_Mur2 SINE Alu -11 138 17 1 871 1068 237 17 28 chr15 37576004 37576291 -65918683 + B4A SINE B4 1 284 -8 1 871 6773 9 0 3 chr15 37577778 37578527 -65916447 - L1Md_T LINE L1 0 6582 5836 1 871 180 276 161 0 chr15 37578628 37578715 -65916259 + L3 LINE CR1 4286 4386 -103 1 871 367 122 12 47 chr15 37578963 37579049 -65915925 + GA-rich Low_complexity Low_complexity 3 85 0 1 871 608 219 6 0 chr15 37579073 37579237 -65915737 + (TATG)n Simple_repeat Simple_repeat 2 166 0 1 871 622 280 175 0 chr15 37579242 37579453 -65915521 - B4 SINE B4 -8 284 37 1 871 903 207 5 72 chr15 37581022 37581230 -65913744 - B3A SINE B2 0 198 5 1 871 242 318 99 7 chr15 37584831 37584977 -65909997 - MIR3 SINE MIR -40 168 14 1 871 693 307 88 0 chr15 37585880 37586118 -65908856 + MER2 DNA MER2_type 87 345 0 1 871 1315 236 53 17 chr15 37586484 37586841 -65908133 - ORR1D2 LTR MaLR 0 370 1 1 871 583 260 27 7 chr15 37587728 37587875 -65907099 + RSINE1 SINE B4 3 152 -13 1 871 1630 303 83 20 chr15 37587928 37588689 -65906285 + Lx8 LINE L1 6663 7471 -2 1 871 2443 114 8 11 chr15 37588831 37589204 -65905770 - L1_Mur2 LINE L1 -1589 4288 3917 1 871 25 31 0 0 chr15 37589752 37589784 -65905190 + AT_rich Low_complexity Low_complexity 1 32 0 1 871 251 259 0 0 chr15 37589798 37589852 -65905122 + RSINE1 SINE B4 1 54 -111 1 871 243 203 0 0 chr15 37589908 37589972 -65905002 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 871 378 303 82 0 chr15 37590562 37590684 -65904290 + B4A SINE B4 8 139 -153 1 871 189 371 43 7 chr15 37591498 37591639 -65903335 + MIRc SINE MIR 55 200 -68 1 871 262 302 53 15 chr15 37592496 37592627 -65902347 + MIR SINE MIR 79 214 -48 1 871 633 231 7 7 chr15 37592688 37592823 -65902151 + ID_B1 SINE B4 87 221 -3 1 871 399 145 0 0 chr15 37592823 37592892 -65902082 + (CAA)n Simple_repeat Simple_repeat 1 69 0 1 871 297 0 0 0 chr15 37596387 37596420 -65898554 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 871 405 0 0 0 chr15 37596588 37596633 -65898341 + (GA)n Simple_repeat Simple_repeat 1 45 0 1 871 231 36 0 0 chr15 37597435 37597463 -65897511 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 871 476 248 25 8 chr15 37597521 37597643 -65897331 + L1MD3 LINE L1 7853 7976 -19 1 871 859 202 48 0 chr15 37597692 37597860 -65897114 - B3A SINE B2 -18 180 5 1 871 227 314 0 128 chr15 37598414 37598593 -65896381 + G-rich Low_complexity Low_complexity 6 161 0 1 871 471 248 77 42 chr15 37598647 37598667 -65896307 - B1_Mur1 SINE Alu -1 148 133 1 871 1914 190 27 3 chr15 37598667 37599036 -65895938 + ORR1C1 LTR MaLR 1 378 0 1 871 471 248 77 42 chr15 37599036 37599158 -65895816 - B1_Mur1 SINE Alu -17 132 1 1 871 464 292 143 67 chr15 37599441 37599918 -65895056 + MER34 LTR ERV1 6 518 -24 1 871 605 188 30 0 chr15 37599927 37600060 -65894914 + ID_B1 SINE B4 86 222 -2 1 871 874 185 95 0 chr15 37601478 37601667 -65893307 + B3 SINE B2 1 207 -9 1 871 440 253 124 40 chr15 37601708 37601868 -65893106 + B3A SINE B2 5 183 -15 1 871 201 74 0 0 chr15 37601868 37601895 -65893079 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 1 871 440 253 124 40 chr15 37601895 37601911 -65893063 + B3A SINE B2 184 196 -2 1 871 25 31 0 0 chr15 37601952 37601984 -65892990 + AT_rich Low_complexity Low_complexity 1 32 0 1 871 447 202 0 0 chr15 37603923 37604047 -65890927 + (TG)n Simple_repeat Simple_repeat 2 125 0 1 871 342 311 85 24 chr15 37604821 37604986 -65889988 - MLT1A0 LTR MaLR -190 175 1 1 871 1613 22 0 16 chr15 37605300 37605486 -65889488 + B2_Mm1t SINE B2 2 184 -9 1 871 406 214 185 17 chr15 37605829 37605948 -65889026 + B1F SINE Alu 9 147 -2 1 871 308 270 54 9 chr15 37606601 37606713 -65888261 + L1MCc LINE L1 168 284 -6139 1 871 1131 95 0 0 chr15 37606834 37606981 -65887993 - B1_Mus1 SINE Alu 0 148 2 1 871 230 292 97 45 chr15 37607720 37607896 -65887078 + L1MCc LINE L1 1283 1467 -4956 1 871 233 231 19 0 chr15 37608055 37608107 -65886867 + CT-rich Low_complexity Low_complexity 2 54 0 1 871 369 274 53 0 chr15 37608117 37608212 -65886762 - B1F SINE Alu -49 100 1 1 871 27 49 0 0 chr15 37608240 37608281 -65886693 + AT_rich Low_complexity Low_complexity 1 41 0 1 871 1149 192 9 36 chr15 37608282 37608503 -65886471 - B3 SINE B2 0 216 2 1 871 251 200 111 0 chr15 37608609 37608688 -65886286 + B1_Mur2 SINE Alu 43 129 -21 1 871 995 207 104 68 chr15 37609165 37609502 -65885472 + ORR1E LTR MaLR 9 357 -2 1 871 421 250 0 0 chr15 37609553 37609637 -65885337 + MTE2b LTR MaLR 16 99 -280 1 871 585 326 112 4 chr15 37609691 37609959 -65885015 + MTE2b LTR MaLR 72 368 -11 1 871 180 298 0 17 chr15 37611066 37611124 -65883850 + L3 LINE CR1 4430 4486 -3 1 871 222 286 10 39 chr15 37612509 37612611 -65882363 + CT-rich Low_complexity Low_complexity 1 99 0 1 871 369 221 29 138 chr15 37612960 37613170 -65881804 - B2_Mm2 SINE B2 -7 188 2 1 871 1065 209 92 132 chr15 37613932 37614334 -65880640 - RLTR18B LTR ERVK -123 389 4 1 871 633 278 7 7 chr15 37615132 37615284 -65879690 + RSINE1 SINE B4 9 160 -5 1 871 908 117 0 16 chr15 37615285 37615467 -65879507 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 1 871 2608 49 65 0 chr15 37615707 37616032 -65878942 + ORR1A1 LTR MaLR 1 346 0 1 871 348 83 0 0 chr15 37616099 37616147 -65878827 + (TATG)n Simple_repeat Simple_repeat 4 51 0 1 872 1085 258 97 12 chr15 37618426 37618756 -65876218 - MTE2b LTR MaLR -21 358 1 1 872 450 315 81 13 chr15 37618838 37619073 -65875901 + ERVL-E-int LTR ERVL 4955 5302 -459 1 872 207 262 0 32 chr15 37619103 37619166 -65875808 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 872 240 35 0 0 chr15 37619166 37619195 -65875779 + (TATAG)n Simple_repeat Simple_repeat 2 30 0 1 872 231 113 17 102 chr15 37619913 37619972 -65875002 - L1MB2 LINE L1 -1 6170 6117 1 872 234 91 0 0 chr15 37619982 37620015 -65874959 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 872 530 229 93 0 chr15 37620056 37620174 -65874800 - RSINE1 SINE B4 -36 129 1 1 872 477 257 136 52 chr15 37621841 37622054 -65872920 - MIR SINE MIR -21 241 11 1 872 2598 165 133 6 chr15 37622210 37622729 -65872245 - RMER4B LTR ERVK 0 585 1 1 872 640 271 101 5 chr15 37622756 37622964 -65872010 + B4A SINE B4 7 234 -58 1 872 3081 75 10 7 chr15 37622964 37623382 -65871592 + BGLII LTR ERVK 1 419 -2 1 872 614 283 11 6 chr15 37623390 37623571 -65871403 + B4A SINE B4 111 292 0 1 872 314 164 71 29 chr15 37623687 37623900 -65871074 + (TA)n Simple_repeat Simple_repeat 1 221 0 1 872 367 204 34 39 chr15 37623880 37624059 -65870915 + (TTATA)n Simple_repeat Simple_repeat 2 179 0 1 872 183 100 0 0 chr15 37624083 37624113 -65870861 + (TATAA)n Simple_repeat Simple_repeat 5 34 0 1 872 361 180 11 11 chr15 37624124 37624214 -65870760 + (TA)n Simple_repeat Simple_repeat 1 90 0 2 872 3503 139 176 8 chr15 37624266 37624897 -65870077 + RMER19A LTR ERVK 1 737 0 2 872 190 108 40 70 chr15 37625560 37625660 -65869314 + A-rich Low_complexity Low_complexity 2 98 0 2 872 384 22 0 0 chr15 37625766 37625811 -65869163 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 872 537 286 55 58 chr15 37626362 37626655 -65868319 + MLT1E1A LTR MaLR 389 680 0 2 872 369 277 45 0 chr15 37626658 37626770 -65868204 + PB1D7 SINE Alu 4 120 0 2 872 340 184 158 0 chr15 37628032 37628108 -65866866 + B1_Mm SINE Alu 31 118 -29 2 872 225 312 85 51 chr15 37628956 37629074 -65865900 + LTR78 LTR ERV1 525 646 -658 2 872 1686 125 46 0 chr15 37629458 37629739 -65865235 + Lx4A LINE L1 6764 7057 -1 2 872 627 246 101 56 chr15 37629826 37630024 -65864950 - B3 SINE B2 -7 209 3 2 872 315 191 0 0 chr15 37631257 37631320 -65863654 + GA-rich Low_complexity Low_complexity 2 64 0 2 872 839 102 8 0 chr15 37631569 37631697 -65863277 + (GA)n Simple_repeat Simple_repeat 2 130 0 2 872 663 196 5 27 chr15 37632109 37632293 -65862681 + G-rich Low_complexity Low_complexity 1 180 0 2 872 958 130 0 33 chr15 37632320 37632503 -65862471 + GA-rich Low_complexity Low_complexity 4 180 0 2 872 190 284 27 95 chr15 37633170 37633244 -65861730 - MIRb SINE MIR -199 69 1 2 872 320 200 12 0 chr15 37633244 37633324 -65861650 + C-rich Low_complexity Low_complexity 4 84 0 2 872 380 274 104 57 chr15 37633900 37634179 -65860795 + B4A SINE B4 1 292 0 2 872 231 256 20 68 chr15 37634572 37634719 -65860255 + (TATATG)n Simple_repeat Simple_repeat 3 142 0 2 872 198 152 51 0 chr15 37634719 37634778 -65860196 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 872 232 120 40 0 chr15 37634882 37634932 -65860042 + (TATATG)n Simple_repeat Simple_repeat 6 57 0 2 872 243 0 0 0 chr15 37634960 37634987 -65859987 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 872 275 303 0 0 chr15 37635077 37635153 -65859821 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2 872 250 183 0 27 chr15 37635168 37635241 -65859733 + (CA)n Simple_repeat Simple_repeat 1 71 0 2 872 3517 25 2 0 chr15 37635370 37635765 -65859209 - MTA_Mm LTR MaLR 0 396 1 2 872 185 65 0 31 chr15 37635768 37635800 -65859174 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2 872 285 232 12 12 chr15 37635804 37635887 -65859087 - RSINE1 SINE B4 0 165 83 2 872 565 261 27 47 chr15 37635959 37636108 -65858866 + ID_B1 SINE B4 79 224 0 2 872 324 0 0 0 chr15 37636607 37636643 -65858331 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 872 816 261 140 15 chr15 37636806 37637258 -65857716 - L1MC1 LINE L1 -1871 6124 5605 2 872 307 121 152 0 chr15 37637258 37637324 -65857650 + BC1_Mm scRNA scRNA 2 77 -75 2 872 616 259 42 0 chr15 37637362 37637505 -65857469 + B3 SINE B2 1 149 -67 2 872 252 0 0 0 chr15 37637512 37637540 -65857434 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 872 568 237 90 36 chr15 37637565 37637947 -65857027 - L1MC1 LINE L1 -626 5616 5197 2 872 283 332 99 81 chr15 37638016 37638288 -65856686 - B4A SINE B4 -14 278 2 2 872 1183 75 0 0 chr15 37638544 37638691 -65856283 + B1_Mus2 SINE Alu 1 147 0 2 872 216 0 0 0 chr15 37638750 37638774 -65856200 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 2 872 239 254 0 78 chr15 37640181 37640258 -65854716 + RLTR20D LTR ERVK 60 130 -438 2 872 358 235 175 7 chr15 37640741 37640878 -65854096 - MER58B DNA MER1_type -99 242 83 2 872 964 213 69 0 chr15 37640887 37641089 -65853885 + B3 SINE B2 1 216 0 2 872 314 206 139 9 chr15 37641249 37641357 -65853617 + MER2 DNA MER2_type 122 243 -102 2 872 1192 57 0 0 chr15 37642242 37642383 -65852591 + B1_Mus2 SINE Alu 1 141 -6 2 872 711 175 0 0 chr15 37642555 37642709 -65852265 + (CA)n Simple_repeat Simple_repeat 1 154 0 2 872 1623 227 99 96 chr15 37642727 37643656 -65851318 + RMER17B LTR ERVK 2 904 -4 2 872 279 175 0 0 chr15 37644288 37644345 -65850629 + C-rich Low_complexity Low_complexity 5 61 0 2 872 408 239 185 0 chr15 37645605 37645735 -65849239 + ID_B1 SINE B4 70 223 -1 2 872 304 303 46 60 chr15 37646956 37647107 -65847867 + LTR79 LTR ERVL 369 517 -10 2 872 526 269 43 37 chr15 37647337 37647499 -65847475 - RSINE1 SINE B4 0 165 3 2 872 348 200 0 0 chr15 37647660 37647740 -65847234 + CT-rich Low_complexity Low_complexity 1 80 0 2 872 22 94 0 0 chr15 37648238 37648302 -65846672 + AT_rich Low_complexity Low_complexity 1 64 0 2 872 244 300 0 0 chr15 37648305 37648365 -65846609 + (TATG)n Simple_repeat Simple_repeat 1 60 0 2 872 782 243 11 11 chr15 37648375 37648558 -65846416 - B3A SINE B2 -15 183 1 2 872 544 261 43 37 chr15 37648902 37649089 -65845885 + MLT1D LTR MaLR 290 477 -28 2 872 700 162 105 23 chr15 37651361 37651494 -65843480 + B1_Mur3 SINE Alu 1 144 -5 2 872 461 342 28 79 chr15 37651710 37652027 -65842947 + ORR1E LTR MaLR 55 355 -4 2 872 654 264 139 27 chr15 37653056 37653422 -65841552 + MLT1A1 LTR MaLR 2 408 0 2 872 1027 127 0 20 chr15 37653615 37653768 -65841206 + B1_Mur4 SINE Alu 1 150 0 2 872 457 194 39 10 chr15 37654954 37655058 -65839916 - B1_Mur1 SINE Alu 0 149 43 2 872 362 304 26 43 chr15 37655050 37655167 -65839807 - B1_Mur1 SINE Alu -34 115 1 2 872 602 117 0 9 chr15 37655795 37655907 -65839067 + (GA)n Simple_repeat Simple_repeat 2 112 0 2 872 864 240 48 19 chr15 37656006 37656214 -65838760 + B3 SINE B2 3 216 0 2 872 590 169 92 17 chr15 37657421 37657541 -65837433 - B1_Mur1 SINE Alu 0 149 21 2 872 294 240 12 74 chr15 37657642 37657723 -65837251 - PB1D9 SINE Alu -42 78 3 2 872 566 273 13 13 chr15 37657723 37657805 -65837169 - ID SINE ID -141 83 2 2 872 249 57 0 0 chr15 37658672 37658707 -65836267 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 872 504 217 75 37 chr15 37659302 37659436 -65835538 + ID_B1 SINE B4 78 216 -8 2 872 474 184 64 0 chr15 37659449 37659558 -65835416 + B1_Mur4 SINE Alu 32 147 -3 2 872 387 0 0 0 chr15 37660194 37660237 -65834737 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 872 352 241 17 17 chr15 37660316 37660434 -65834540 + (TCTG)n Simple_repeat Simple_repeat 2 119 0 2 872 314 141 0 27 chr15 37660447 37660520 -65834454 + (TCTCTG)n Simple_repeat Simple_repeat 4 74 0 2 872 261 247 77 144 chr15 37660631 37660735 -65834239 - B4A SINE B4 -145 147 51 2 872 1031 160 122 0 chr15 37661471 37661659 -65833315 + B3 SINE B2 1 211 -5 2 872 518 307 131 37 chr15 37661681 37662204 -65832770 + L1MA7 LINE L1 5055 5637 -675 2 872 304 224 52 13 chr15 37662218 37662295 -65832679 + ID_B1 SINE B4 80 159 -65 2 872 1092 297 108 12 chr15 37662309 37662892 -65832082 + L1MA7 LINE L1 5652 6290 -1 2 872 414 0 0 0 chr15 37663039 37663085 -65831889 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 872 285 312 159 0 chr15 37665044 37665214 -65829760 + B4A SINE B4 7 203 -89 2 872 234 0 0 0 chr15 37665357 37665383 -65829591 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 872 543 90 0 0 chr15 37665826 37665904 -65829070 + (GGGA)n Simple_repeat Simple_repeat 4 81 0 2 872 336 133 0 0 chr15 37665950 37666010 -65828964 + (TTAA)n Simple_repeat Simple_repeat 3 62 0 2 872 495 384 70 21 chr15 37667002 37667375 -65827599 + Arthur1 DNA Tip100 168 558 -3389 2 872 216 273 0 18 chr15 37667756 37667812 -65827162 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 872 5088 117 102 29 chr15 37667971 37668261 -65826713 + RMER17B LTR ERVK 1 317 -641 2 872 1284 34 0 0 chr15 37668261 37668408 -65826566 - B1_Mus2 SINE Alu 0 147 1 2 872 5088 117 102 29 chr15 37668408 37669010 -65825964 + RMER17B LTR ERVK 318 958 0 2 872 389 231 125 0 chr15 37669265 37669369 -65825605 + PB1D10 SINE Alu 1 117 0 2 872 509 297 182 17 chr15 37669563 37669799 -65825175 + MLT1A0 LTR MaLR 39 313 -52 2 872 240 35 0 0 chr15 37669923 37669952 -65825022 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 872 227 323 62 0 chr15 37669954 37670019 -65824955 + B4 SINE B4 221 289 -3 2 872 246 156 0 0 chr15 37670029 37670074 -65824900 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 872 777 269 114 79 chr15 37671119 37671340 -65823634 - ORR1E LTR MaLR -4 355 137 2 872 3967 109 187 92 chr15 37671340 37671751 -65823223 - RMER17A2 LTR ERVK 0 906 463 2 872 204 40 0 0 chr15 37671751 37671776 -65823198 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 872 3967 109 187 92 chr15 37671776 37672191 -65822783 - RMER17A2 LTR ERVK -444 462 3 2 872 777 269 114 79 chr15 37672191 37672312 -65822662 - ORR1E LTR MaLR -223 136 1 2 872 495 334 80 43 chr15 37672944 37673382 -65821592 + L2 LINE L2 2629 3082 -337 2 872 4334 25 12 0 chr15 37674067 37674554 -65820420 + MT2_Mm LTR ERVL 1 493 0 2 872 603 149 0 0 chr15 37676861 37676968 -65818006 + (TAG)n Simple_repeat Simple_repeat 1 107 0 2 872 752 310 45 62 chr15 37677736 37678028 -65816946 + B4A SINE B4 6 292 0 2 872 270 214 55 41 chr15 37678745 37678818 -65816156 + PB1D10 SINE Alu 29 102 -15 2 872 271 325 0 0 chr15 37678978 37679104 -65815870 + L1MA4A LINE L1 5772 5897 -406 2 872 308 347 107 90 chr15 37679333 37679577 -65815397 - HAL1 LINE L1 -865 1642 1395 2 872 1453 124 31 202 chr15 37679619 37679790 -65815184 + RLTR24 LTR ERV1 1 174 -355 2 872 1928 125 76 0 chr15 37679790 37680093 -65814881 - ORR1A2 LTR MaLR -1 326 1 2 872 1453 124 31 202 chr15 37680093 37680262 -65814712 + RLTR24 LTR ERV1 175 281 -248 2 872 2064 136 9 120 chr15 37680262 37680506 -65814468 + RMER10B LTR ERVL 2 220 -178 2 872 1670 169 214 21 chr15 37680506 37680880 -65814094 - RLTR41 LTR ERV1 0 446 1 2 872 2064 136 9 120 chr15 37680880 37681078 -65813896 + RMER10B LTR ERVL 221 395 -3 2 872 1241 167 87 8 chr15 37681080 37681255 -65813719 + RLTR24 LTR ERV1 262 438 -91 2 872 279 0 0 0 chr15 37681255 37681286 -65813688 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 872 1241 167 87 8 chr15 37681286 37681352 -65813622 + RLTR24 LTR ERV1 439 521 -8 2 872 333 0 0 0 chr15 37681352 37681389 -65813585 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 872 651 146 0 0 chr15 37681389 37681519 -65813455 + (TG)n Simple_repeat Simple_repeat 2 131 0 3 872 1116 55 14 0 chr15 37681525 37681670 -65813304 + B1_Mus1 SINE Alu 2 148 0 3 872 268 304 0 89 chr15 37681688 37681789 -65813185 - B4A SINE B4 -1 291 200 3 872 285 319 0 14 chr15 37681871 37681944 -65813030 - B4A SINE B4 -218 74 3 3 872 491 321 43 113 chr15 37682032 37682359 -65812615 - HAL1 LINE L1 -1332 1175 872 2 872 291 194 116 29 chr15 37683035 37683104 -65811870 - ORR1A4 LTR MaLR -254 75 1 3 872 1370 172 113 121 chr15 37683201 37683472 -65811502 + RLTR23 LTR ERV1 11 266 -164 3 872 1072 39 234 19 chr15 37683472 37683630 -65811344 - B2_Mm2 SINE B2 -2 193 2 3 872 1370 172 113 121 chr15 37683630 37683755 -65811219 + RLTR23 LTR ERV1 267 404 -26 3 872 2370 130 91 29 chr15 37683909 37684329 -65810645 + RLTR41 LTR ERV1 1 446 0 3 872 475 317 109 38 chr15 37684434 37684644 -65810330 + B4 SINE B4 66 290 -2 3 872 258 192 0 0 chr15 37684650 37684702 -65810272 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 872 215 132 26 0 chr15 37685134 37685172 -65809802 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 872 528 303 13 13 chr15 37685218 37685372 -65809602 + B4A SINE B4 2 155 -137 3 872 405 0 0 0 chr15 37685372 37685417 -65809557 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 872 902 208 101 5 chr15 37685748 37685956 -65809018 - MTD LTR MaLR -191 228 1 3 872 2068 176 2 43 chr15 37686039 37686436 -65808538 + RMER10B LTR ERVL 1 381 -17 3 872 324 0 0 0 chr15 37687014 37687050 -65807924 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 872 771 225 145 57 chr15 37687055 37687352 -65807622 + RLTR42-int LTR ERVK 235 557 -4965 3 872 474 18 0 0 chr15 37687357 37687412 -65807562 + (TATG)n Simple_repeat Simple_repeat 2 56 0 3 872 1606 170 71 9 chr15 37687455 37687781 -65807193 + RLTR42-int LTR ERVK 687 1032 -4490 3 872 371 38 0 37 chr15 37687861 37687915 -65807059 + (TAA)n Simple_repeat Simple_repeat 3 54 0 3 872 5091 188 100 65 chr15 37687922 37689302 -65805672 + RLTR42-int LTR ERVK 1537 2964 -2558 3 872 393 47 123 15 chr15 37689324 37689389 -65805585 + PB1D9 SINE Alu 1 72 -48 3 872 357 183 118 0 chr15 37689389 37689409 -65805565 - IAPEY2_LTR LTR ERVK -155 176 99 3 872 2470 30 43 0 chr15 37689405 37689708 -65805266 - IAPEY2_LTR LTR ERVK -41 316 1 3 872 5987 153 117 18 chr15 37689710 37692013 -65802961 + RLTR42-int LTR ERVK 2946 5522 0 3 872 1303 195 8 4 chr15 37692014 37692251 -65802723 + RLTR42 LTR ERVK 2 239 0 3 872 776 223 69 5 chr15 37692533 37692736 -65802238 - B3 SINE B2 0 216 1 3 872 743 84 43 25 chr15 37693394 37693679 -65801295 + (TG)n Simple_repeat Simple_repeat 1 290 0 3 872 729 99 37 34 chr15 37693694 37693992 -65800982 + (TG)n Simple_repeat Simple_repeat 1 299 0 3 872 852 74 8 45 chr15 37694008 37694285 -65800689 + (TG)n Simple_repeat Simple_repeat 1 266 0 3 872 218 282 55 134 chr15 37694290 37694339 -65800635 - RSINE1 SINE B4 -13 152 2 3 872 426 231 26 61 chr15 37694339 37694454 -65800520 - B3A SINE B2 -87 111 1 3 872 579 269 127 8 chr15 37695460 37695704 -65799270 - B4 SINE B4 -14 278 6 3 872 257 371 88 50 chr15 37696000 37696261 -65798713 + MLT1K LTR MaLR 150 420 -175 3 872 555 245 115 0 chr15 37696555 37696694 -65798280 - RSINE1 SINE B4 -8 157 3 3 872 487 188 8 8 chr15 37696873 37696991 -65797983 + CT-rich Low_complexity Low_complexity 3 120 0 3 872 771 32 0 0 chr15 37697308 37697402 -65797572 + (GA)n Simple_repeat Simple_repeat 2 95 0 3 872 288 256 122 0 chr15 37697699 37697781 -65797193 + PB1D10 SINE Alu 19 110 -7 3 872 2053 132 21 21 chr15 37697988 37698313 -65796661 + ORR1A4 LTR MaLR 5 329 0 3 872 462 242 160 23 chr15 37698806 37698937 -65796037 + B1F2 SINE Alu 1 149 0 3 872 536 241 138 35 chr15 37699033 37699257 -65795717 + L1MB2 LINE L1 5778 6030 -261 3 872 292 342 151 10 chr15 37699268 37699369 -65795605 - MER102b DNA MER1_type -120 221 105 3 872 207 0 0 0 chr15 37699369 37699392 -65795582 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 872 292 342 151 10 chr15 37699392 37699482 -65795492 - MER102b DNA MER1_type -237 104 4 3 872 501 258 33 0 chr15 37699745 37699865 -65795109 - RSINE1 SINE B4 -40 125 2 3 872 350 346 66 29 chr15 37701058 37701299 -65793675 - MamRep605 Unknown Unknown -64 812 563 3 872 319 286 43 0 chr15 37701375 37701445 -65793529 + ID4 SINE ID 10 82 -1 3 872 211 273 191 29 chr15 37701663 37701799 -65793175 - MIRb SINE MIR -57 211 54 3 872 415 296 27 27 chr15 37702343 37702492 -65792482 + MLT1A1 LTR MaLR 247 395 -13 3 872 282 287 103 17 chr15 37702490 37702607 -65792367 + MLT1K LTR MaLR 291 417 -178 3 872 1363 151 179 68 chr15 37702979 37703172 -65791802 + RMER17C LTR ERVK 1 179 -231 3 872 982 118 18 0 chr15 37703172 37703341 -65791633 + (TCCC)n Simple_repeat Simple_repeat 2 173 0 3 872 1363 151 179 68 chr15 37703341 37703516 -65791458 + RMER17C LTR ERVK 180 410 0 3 872 489 311 53 0 chr15 37703876 37704008 -65790966 + RSINE1 SINE B4 12 150 -15 3 872 342 0 0 0 chr15 37704162 37704200 -65790774 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 872 204 206 0 0 chr15 37704237 37704271 -65790703 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 872 288 277 46 0 chr15 37704279 37704344 -65790630 - B4A SINE B4 0 292 225 3 872 374 200 75 0 chr15 37704360 37704440 -65790534 - B3 SINE B2 -9 207 122 3 872 225 246 35 0 chr15 37705117 37705174 -65789800 + BC1_Mm scRNA scRNA 18 76 -76 3 872 191 36 36 0 chr15 37705230 37705258 -65789716 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 3 872 1356 240 157 8 chr15 37707664 37708021 -65786953 - MTD LTR MaLR 0 419 10 3 872 420 296 101 91 chr15 37708037 37708245 -65786729 - MER2 DNA MER2_type -40 305 96 3 872 208 87 42 42 chr15 37710335 37710383 -65784591 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 3 872 459 0 0 0 chr15 37710738 37710789 -65784185 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 872 501 305 51 25 chr15 37711009 37711167 -65783807 + RSINE1 SINE B4 2 163 -2 3 872 333 258 48 117 chr15 37711167 37711215 -65783759 + B2_Mm2 SINE B2 1 192 -3 3 872 368 234 32 11 chr15 37711215 37711310 -65783664 + Lx9 LINE L1 7541 7637 -7 3 872 306 323 12 47 chr15 37711353 37711522 -65783452 + RSINE1 SINE B4 3 165 0 3 872 1206 48 0 26 chr15 37711655 37711806 -65783168 + B1_Mus2 SINE Alu 1 147 0 3 872 244 281 74 94 chr15 37712117 37712266 -65782708 + MTEa LTR MaLR 234 379 0 3 872 504 0 0 0 chr15 37713022 37713078 -65781896 + (TC)n Simple_repeat Simple_repeat 1 56 0 3 872 336 77 0 0 chr15 37713078 37713129 -65781845 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 872 197 317 45 71 chr15 37713955 37714067 -65780907 - L2 LINE L2 -2778 641 533 3 872 377 287 61 0 chr15 37714320 37714435 -65780539 + PB1 SINE Alu 3 124 -3 3 872 273 57 0 0 chr15 37714439 37714474 -65780500 + (TTAA)n Simple_repeat Simple_repeat 2 36 0 3 872 225 358 0 60 chr15 37714519 37714635 -65780339 + MLT1E3 LTR MaLR 509 617 -7 3 872 561 111 67 6 chr15 37715385 37715549 -65779425 + (CA)n Simple_repeat Simple_repeat 2 175 0 3 872 567 107 55 20 chr15 37715576 37715994 -65778980 + (CA)n Simple_repeat Simple_repeat 1 432 0 3 872 1305 311 79 12 chr15 37716310 37716905 -65778069 + L1MB3 LINE L1 5542 6176 -7 3 872 537 302 104 84 chr15 37717096 37717443 -65777531 + ORR1E LTR MaLR 6 359 0 3 872 243 0 0 0 chr15 37717579 37717606 -65777368 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 872 321 26 0 0 chr15 37718269 37718307 -65776667 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 3 872 801 196 173 0 chr15 37718372 37718551 -65776423 + B3 SINE B2 1 210 -6 3 872 484 226 171 21 chr15 37718777 37718917 -65776057 - MER117 DNA MER1_type -27 170 10 3 872 251 267 66 13 chr15 37719474 37719550 -65775424 + ID_B1 SINE B4 138 217 -7 3 872 191 61 30 0 chr15 37722554 37722587 -65772387 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 872 796 246 78 15 chr15 37722713 37722981 -65771993 + B4 SINE B4 4 288 -4 3 872 203 103 26 0 chr15 37722982 37723021 -65771953 + (CCCCCG)n Simple_repeat Simple_repeat 2 41 0 3 872 456 248 83 23 chr15 37723748 37723880 -65771094 + MLT1A1 LTR MaLR 269 408 0 3 872 356 283 144 6 chr15 37724394 37724554 -65770420 + Tigger7 DNA MER2_type 158 339 -2152 3 872 21 0 0 0 chr15 37724567 37724588 -65770386 + AT_rich Low_complexity Low_complexity 1 21 0 3 872 1169 220 26 8 chr15 37724590 37724856 -65770118 - RLTR20B3 LTR ERVK -42 535 265 3 872 1541 174 24 171 chr15 37724882 37725138 -65769836 - RLTR41 LTR ERV1 0 446 199 3 872 759 11 0 0 chr15 37725138 37725226 -65769748 + (GTTTG)n Simple_repeat Simple_repeat 2 89 0 3 872 1541 174 24 171 chr15 37725226 37725420 -65769554 - RLTR41 LTR ERV1 -248 198 62 3 872 1077 161 44 78 chr15 37725478 37725774 -65769200 - RLTR20B3 LTR ERVK -271 306 21 3 872 1531 153 191 127 chr15 37726274 37726693 -65768281 + RLTR41 LTR ERV1 1 446 0 3 872 1458 254 31 3 chr15 37726852 37727207 -65767767 + MTEb LTR MaLR 15 379 0 3 872 182 308 63 13 chr15 37727605 37727684 -65767290 + L2a LINE L2 3265 3347 -79 3 872 802 247 81 105 chr15 37727842 37728213 -65766761 - L1MA7 LINE L1 -398 5893 5532 3 872 339 263 22 24 chr15 37728712 37728829 -65766145 - L1MA7 LINE L1 -716 5455 5331 3 872 486 0 0 0 chr15 37728833 37728887 -65766087 + (TTTTG)n Simple_repeat Simple_repeat 4 57 0 3 872 279 0 0 0 chr15 37728955 37728986 -65765988 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 872 295 322 21 11 chr15 37729028 37729122 -65765852 - RSINE1 SINE B4 -60 105 11 3 872 633 131 0 0 chr15 37729320 37729450 -65765524 + (TC)n Simple_repeat Simple_repeat 2 131 0 3 872 533 212 50 66 chr15 37729453 37729635 -65765339 + MTEa LTR MaLR 201 379 0 3 872 488 259 162 72 chr15 37729636 37730191 -65764783 - L1MA7 LINE L1 -894 5246 4642 3 872 23 0 0 0 chr15 37730198 37730221 -65764753 + AT_rich Low_complexity Low_complexity 1 23 0 3 872 718 226 134 5 chr15 37730221 37730255 -65764719 - B3 SINE B2 -5 211 165 3 872 405 0 0 0 chr15 37730255 37730300 -65764674 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 872 718 226 134 5 chr15 37730300 37730452 -65764522 - B3 SINE B2 -52 164 1 3 872 367 252 207 17 chr15 37730541 37730781 -65764193 + L1M4 LINE L1 5533 5818 -366 3 872 399 157 0 0 chr15 37730781 37730851 -65764123 + (TAA)n Simple_repeat Simple_repeat 1 70 0 3 872 22 35 0 0 chr15 37731767 37731796 -65763178 + AT_rich Low_complexity Low_complexity 1 29 0 3 872 244 310 28 0 chr15 37731946 37732017 -65762957 - ID4 SINE ID -2 81 9 4 872 267 303 132 25 chr15 37732780 37732939 -65762035 + ID_B1 SINE B4 3 178 -46 4 872 21 36 0 0 chr15 37733874 37733902 -65761072 + GC_rich Low_complexity Low_complexity 1 28 0 4 872 285 246 145 16 chr15 37734123 37734247 -65760727 - RMER20A LTR ERVK -236 280 141 4 872 266 282 144 8 chr15 37736166 37736298 -65758676 + L1M5 LINE L1 2554 2703 -3443 4 872 4228 116 177 72 chr15 37736298 37737228 -65757746 + RLTR25B LTR ERVK 1 1028 0 4 872 338 291 56 25 chr15 37737232 37737394 -65757580 + L1M5 LINE L1 2702 2868 -3278 4 872 754 324 89 43 chr15 37737617 37738730 -65756244 - L1MEc LINE L1 -4483 1932 687 4 872 320 262 74 35 chr15 37739490 37739692 -65755282 - L1MC4a LINE L1 -2008 5874 5665 4 872 775 291 51 84 chr15 37739707 37740041 -65754933 - MLT1A0 LTR MaLR -3 371 48 4 872 1290 247 17 106 chr15 37740317 37740733 -65754241 - MTE2a LTR MaLR 0 379 1 4 872 928 254 10 0 chr15 37740910 37741115 -65753859 + B3 SINE B2 1 207 -9 4 872 236 385 0 0 chr15 37741390 37741481 -65753493 - MLT1B LTR MaLR -104 286 196 4 872 314 239 15 0 chr15 37741610 37741677 -65753297 + L1MC3 LINE L1 7406 7473 -312 4 872 515 319 119 16 chr15 37741669 37741988 -65752986 + L1ME1 LINE L1 5413 5764 -400 4 872 447 290 43 0 chr15 37742044 37742182 -65752792 + B3A SINE B2 1 144 -54 4 872 7541 144 64 30 chr15 37742206 37742443 -65752531 - RLTR21 LTR ERVK -52 1520 1289 4 872 267 79 0 0 chr15 37742443 37742481 -65752493 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 872 7541 144 64 30 chr15 37742481 37742632 -65752342 - RLTR21 LTR ERVK -284 1288 1128 4 872 432 0 0 0 chr15 37742632 37742680 -65752294 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 872 7541 144 64 30 chr15 37742680 37743760 -65751214 - RLTR21 LTR ERVK -445 1127 1 4 872 432 0 0 0 chr15 37743778 37743826 -65751148 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 872 431 293 126 73 chr15 37743831 37744203 -65750771 + L1ME1 LINE L1 5785 6176 -2 4 872 1021 235 193 0 chr15 37744214 37744525 -65750449 - MTEa LTR MaLR -8 371 1 4 872 385 226 12 5 chr15 37744820 37744920 -65750054 - MTD LTR MaLR 0 419 273 4 872 250 256 8 16 chr15 37746204 37746331 -65748643 + (CATA)n Simple_repeat Simple_repeat 1 126 0 4 872 534 119 0 0 chr15 37746366 37746450 -65748524 + (TA)n Simple_repeat Simple_repeat 1 84 0 4 872 279 302 0 11 chr15 37746450 37746537 -65748437 + (CA)n Simple_repeat Simple_repeat 1 86 0 4 872 209 33 33 0 chr15 37746654 37746684 -65748290 + (CATCT)n Simple_repeat Simple_repeat 4 34 0 4 872 538 228 31 16 chr15 37746716 37746845 -65748129 - MTE2b LTR MaLR 0 379 249 4 872 333 200 92 0 chr15 37746871 37746936 -65748038 - MTE2b LTR MaLR -221 158 88 4 872 235 396 22 29 chr15 37746941 37747079 -65747895 - LTR16D1 LTR ERVL -365 310 174 4 872 1989 126 67 0 chr15 37747110 37747451 -65747523 + ORR1B1 LTR MaLR 31 394 0 4 872 2303 193 5 0 chr15 37747452 37747897 -65747077 + ORR1B1-int LTR MaLR 2 448 -1515 4 872 2192 110 12 81 chr15 37747897 37748303 -65746671 - RLTR1B LTR ERV1 0 512 135 4 13 3512 193 85 27 chr15 37748427 37749321 -65745653 + ORR1B1-int LTR MaLR 453 1398 -111 4 873 246 224 118 0 chr15 37749336 37749412 -65745562 + L1MB5 LINE L1 5927 6011 -163 4 873 460 277 42 0 chr15 37749414 37749533 -65745441 - MTEa LTR MaLR 0 379 256 4 873 210 279 38 19 chr15 37750329 37750435 -65744539 + L2 LINE L2 2803 2910 -509 4 873 1101 65 0 0 chr15 37750791 37750945 -65744029 - ORR1B1 LTR MaLR -240 154 1 4 873 571 271 56 20 chr15 37750954 37751150 -65743824 + Lx7 LINE L1 7162 7364 -332 4 873 208 139 0 0 chr15 37751170 37751206 -65743768 + (T)n Simple_repeat Simple_repeat 1 36 0 4 873 586 299 10 65 chr15 37751295 37751495 -65743479 + B4A SINE B4 85 273 -19 4 873 814 250 167 61 chr15 37752036 37752492 -65742482 - RLTR11A2 LTR ERVK 0 527 24 4 873 1906 189 97 37 chr15 37752833 37753227 -65741747 + RLTR20C LTR ERVK 23 435 -99 4 873 387 0 0 0 chr15 37753227 37753270 -65741704 + (GA)n Simple_repeat Simple_repeat 1 43 0 4 873 216 0 0 0 chr15 37753270 37753293 -65741681 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 873 1906 189 97 37 chr15 37753293 37753380 -65741594 + RLTR20C LTR ERVK 436 533 -1 4 873 467 144 11 22 chr15 37753459 37753551 -65741423 + ORR1D1 LTR MaLR 1 91 -283 4 873 1412 251 38 86 chr15 37753557 37754032 -65740942 - RLTR28B LTR ERVL -29 452 1 4 873 2534 120 6 0 chr15 37754050 37754399 -65740575 + Lx4A LINE L1 6559 6909 -149 4 873 30 27 0 0 chr15 37754480 37754517 -65740457 + AT_rich Low_complexity Low_complexity 1 37 0 4 873 611 284 54 116 chr15 37755109 37755368 -65739606 - MLT1D LTR MaLR -2 503 261 4 873 794 201 0 20 chr15 37755483 37755635 -65739339 + B1_Mur3 SINE Alu 1 149 0 4 873 338 248 231 0 chr15 37755666 37755787 -65739187 - MLT1D LTR MaLR -460 167 19 4 873 1950 128 21 72 chr15 37756065 37756453 -65738521 - RLTR9A LTR ERVK 0 368 1 4 873 1072 48 14 7 chr15 37756468 37756615 -65738359 + (TCTCCC)n Simple_repeat Simple_repeat 3 150 0 4 873 243 0 0 0 chr15 37756616 37756643 -65738331 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 873 428 231 15 28 chr15 37757114 37757227 -65737747 - PB1D9 SINE Alu 0 120 5 4 873 291 265 0 29 chr15 37757506 37757576 -65737398 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 4 873 189 0 0 0 chr15 37757617 37757638 -65737336 + (TGG)n Simple_repeat Simple_repeat 1 21 0 4 873 797 132 14 7 chr15 37757645 37757790 -65737184 + URR1A DNA MER1_type 81 226 0 4 873 1823 169 120 5 chr15 37758018 37758392 -65736582 - MTD LTR MaLR 0 419 3 4 873 335 100 0 32 chr15 37758765 37758827 -65736147 + (GGA)n Simple_repeat Simple_repeat 3 62 0 4 873 609 23 35 0 chr15 37758828 37758915 -65736059 + (GA)n Simple_repeat Simple_repeat 1 90 0 4 873 505 273 76 0 chr15 37759005 37759177 -65735797 - ERVL-B4-int LTR ERVL -2 5712 5528 4 873 2676 189 78 26 chr15 37759200 37759739 -65735235 + RMER1B Other Other 485 1051 -15 4 873 267 291 31 19 chr15 37760000 37760161 -65734813 + (TATG)n Simple_repeat Simple_repeat 2 164 0 4 873 449 287 141 54 chr15 37760461 37760813 -65734161 - ERVL-B4-int LTR ERVL -744 4970 4528 4 873 471 48 0 0 chr15 37760826 37760888 -65734086 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 873 732 279 56 40 chr15 37760898 37761148 -65733826 - B4A SINE B4 -38 254 1 4 873 21 0 0 0 chr15 37761646 37761667 -65733307 + AT_rich Low_complexity Low_complexity 1 21 0 4 873 532 254 45 0 chr15 37761724 37761858 -65733116 - B1F SINE Alu -7 142 3 4 873 3124 89 0 2 chr15 37761898 37762324 -65732650 - Lx3_Mus LINE L1 -376 5510 5086 4 873 5090 65 8 1 chr15 37762321 37763131 -65731843 + Lx3_Mus LINE L1 5461 6275 -734 4 873 448 135 0 11 chr15 37763131 37763221 -65731753 + Lx3_Mus LINE L1 6921 7009 0 4 873 932 222 96 11 chr15 37763416 37763659 -65731315 + RMER1B Other Other 594 858 -208 4 873 414 0 0 0 chr15 37763659 37763705 -65731269 + (GA)n Simple_repeat Simple_repeat 1 46 0 4 873 783 204 71 18 chr15 37763705 37763748 -65731226 + RMER1C Other Other 243 296 -1046 4 873 491 228 36 60 chr15 37764044 37764212 -65730762 - RNLTR23 LTR ERVK 0 642 479 4 873 1968 112 6 56 chr15 37764972 37765311 -65729663 - RLTRETN_Mm LTR ERVK 0 322 1 4 873 34659 80 6 38 chr15 37765311 37770315 -65724659 - MMETn-int LTR ERVK 0 4844 2 4 873 1905 113 12 62 chr15 37770316 37770655 -65724319 - RLTRETN_Mm LTR ERVK 0 322 1 4 873 707 265 5 29 chr15 37770656 37770830 -65724144 - RNERVK23-int LTR ERVK -430 7787 7614 4 873 428 0 0 19 chr15 37770830 37770883 -65724091 + (TC)n Simple_repeat Simple_repeat 2 53 0 4 873 19909 273 38 19 chr15 37770883 37776897 -65718077 - RNERVK23-int LTR ERVK -637 7580 1450 4 873 454 324 0 16 chr15 37776981 37777169 -65717805 - RNERVK23-int LTR ERVK -7183 1034 850 4 873 1458 247 3 3 chr15 37777578 37777907 -65717067 - RNERVK23-int LTR ERVK -7693 524 196 4 873 508 217 42 60 chr15 37778114 37778281 -65716693 - RNLTR23 LTR ERVK 0 642 479 4 873 2333 260 25 29 chr15 37778586 37779320 -65715654 + RMER1C Other Other 163 995 -347 4 873 3565 67 2 4 chr15 37779324 37779805 -65715169 + RLTR13B1 LTR ERVK 414 893 0 4 873 1289 158 24 0 chr15 37779805 37780014 -65714960 + RMER1C Other Other 1005 1218 -124 4 873 260 172 0 17 chr15 37780014 37780073 -65714901 + CT-rich Low_complexity Low_complexity 2 59 0 4 873 474 269 35 9 chr15 37780077 37780193 -65714781 + RMER1C Other Other 1203 1321 -21 4 873 404 296 100 54 chr15 37781702 37781963 -65713011 - B4A SINE B4 -18 274 2 4 873 1070 16 8 0 chr15 37782111 37782239 -65712735 + (CA)n Simple_repeat Simple_repeat 1 129 0 4 873 206 118 39 0 chr15 37782240 37782291 -65712683 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 4 873 2174 149 38 23 chr15 37783180 37783571 -65711403 - RMER4B LTR ERVK 0 585 189 4 873 234 327 0 0 chr15 37783867 37783977 -65710997 + (TA)n Simple_repeat Simple_repeat 1 110 0 4 873 6736 155 46 18 chr15 37784224 37786324 -65708650 + MYSERV16_I-int LTR ERVK 5 2321 -5 4 873 2479 216 25 18 chr15 37786329 37786885 -65708089 + RLTR20B1 LTR ERVK 1 560 -3 4 873 399 360 74 13 chr15 37787141 37787372 -65707602 + HERV16-int LTR ERVL 1825 2069 -2927 4 873 342 0 0 0 chr15 37787627 37787665 -65707309 + (TAA)n Simple_repeat Simple_repeat 2 39 0 4 873 610 311 45 101 chr15 37787868 37788244 -65706730 - ORR1E LTR MaLR -1 358 4 4 873 207 100 0 0 chr15 37788249 37788279 -65706695 + (TATAG)n Simple_repeat Simple_repeat 4 33 0 4 873 374 253 59 114 chr15 37788939 37789229 -65705745 + RMER16-int LTR ERVK 47 320 -2994 4 873 199 79 26 26 chr15 37789229 37789268 -65705706 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 4 873 2826 154 127 51 chr15 37789379 37790142 -65704832 + RMER16-int LTR ERVK 256 1755 -5651 4 873 36397 45 0 3 chr15 37790143 37795554 -65699420 + L1Md_T LINE L1 100 5589 -297 4 873 8648 31 0 0 chr15 37795554 37796550 -65698424 + L1Md_T LINE L1 5590 6585 0 4 873 2304 184 96 70 chr15 37796555 37797417 -65697557 + RMER16-int LTR ERVK 1107 2566 -4840 4 873 1135 93 19 120 chr15 37797429 37797637 -65697337 + RMER16-int LTR ERVK 1674 1860 -3546 4 873 12172 132 35 25 chr15 37798275 37800436 -65694538 + RMER16-int LTR ERVK 1840 3866 -1540 4 873 278 224 101 95 chr15 37800703 37800861 -65694113 + RMER16-int LTR ERVK 5221 5379 -27 4 873 654 218 244 49 chr15 37800958 37801266 -65693708 + RLTR9A LTR ERVK 1 368 0 4 873 362 296 45 139 chr15 37801326 37801636 -65693338 + RMER10A LTR ERVL 129 409 -33 4 873 2269 174 138 13 chr15 37801702 37802172 -65692802 + RLTR24 LTR ERV1 1 529 0 4 873 586 130 0 18 chr15 37802368 37802478 -65692496 + (GAAA)n Simple_repeat Simple_repeat 2 109 0 4 873 333 0 0 0 chr15 37802480 37802517 -65692457 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 4 873 880 259 133 113 chr15 37803027 37803728 -65691246 + RLTR19-int LTR ERVK 3667 4381 -1756 4 873 2009 186 102 42 chr15 37803944 37804213 -65690761 + RLTR24 LTR ERV1 1 297 -232 4 873 2305 142 53 5 chr15 37804213 37804589 -65690385 + ORR1B1 LTR MaLR 1 394 0 4 873 2009 186 102 42 chr15 37804589 37804818 -65690156 + RLTR24 LTR ERV1 298 529 0 4 873 231 347 0 0 chr15 37805156 37805231 -65689743 + ID4_ SINE ID 7 81 -2 4 873 266 295 52 26 chr15 37805484 37805599 -65689375 - MLT1I LTR MaLR -281 130 13 4 873 5458 71 9 0 chr15 37805807 37806500 -65688474 + L1_Mus1 LINE L1 5869 6567 0 4 873 402 21 0 0 chr15 37806883 37806930 -65688044 + (TC)n Simple_repeat Simple_repeat 1 47 0 4 873 297 100 0 0 chr15 37806931 37806981 -65687993 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 873 2900 21 0 21 chr15 37807435 37807769 -65687205 + IAPLTR2b LTR ERVK 1 327 0 5 873 919 129 87 6 chr15 37807771 37807943 -65687031 + IAPEz-int LTR ERVK 10 195 -6286 5 873 229 244 0 0 chr15 37807951 37807996 -65686978 + RLTR27 LTR ERVK 231 275 -34 5 873 5245 79 82 59 chr15 37807996 37808805 -65686169 + IAPEz-int LTR ERVK 168 994 -5487 5 873 391 88 0 0 chr15 37808806 37808863 -65686111 + B1_Mus1 SINE Alu 1 57 -91 5 873 1859 84 4 0 chr15 37808868 37809107 -65685867 + IAPEY3-int LTR ERVK 2258 2497 -5183 5 873 14356 72 9 6 chr15 37809106 37810926 -65684048 + IAPEz-int LTR ERVK 4656 6481 0 5 873 2922 15 0 21 chr15 37810926 37811260 -65683714 + IAPLTR2b LTR ERVK 1 327 0 5 873 665 109 181 0 chr15 37811301 37811439 -65683535 + ORR1B1 LTR MaLR 1 163 -231 5 873 1740 185 91 83 chr15 37811459 37811966 -65683008 - RLTR11A LTR ERVK -17 511 1 5 873 1343 142 22 0 chr15 37811969 37812195 -65682779 + ORR1B1 LTR MaLR 164 394 0 5 873 326 236 3 172 chr15 37812196 37812362 -65682612 - MTE2a LTR MaLR -31 348 214 5 873 232 224 17 17 chr15 37812395 37812454 -65682520 + GA-rich Low_complexity Low_complexity 1 59 0 5 873 646 272 46 62 chr15 37812621 37812878 -65682096 - MTE2a LTR MaLR -123 256 40 5 873 380 291 103 42 chr15 37812904 37813069 -65681905 + MIRb SINE MIR 30 204 -64 5 873 1847 104 14 81 chr15 37813115 37813460 -65681514 + RLTRETN_Mm LTR ERVK 1 322 0 5 873 2132 151 65 0 chr15 37814239 37814623 -65680351 + MTC LTR MaLR 13 421 0 5 873 249 224 52 0 chr15 37814751 37814809 -65680165 + MLT1A1 LTR MaLR 54 114 -294 5 873 283 297 42 59 chr15 37814866 37814984 -65679990 + MIRb SINE MIR 74 189 -79 5 873 274 300 8 68 chr15 37815164 37815282 -65679692 + MTEb LTR MaLR 269 379 0 5 873 818 219 124 159 chr15 37815503 37816074 -65678900 + RLTR19-int LTR ERVK 2531 3081 -3056 5 873 447 19 0 0 chr15 37816223 37816275 -65678699 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 873 946 99 56 0 chr15 37816277 37816419 -65678555 - B2_Mm2 SINE B2 -45 150 1 5 873 654 232 50 96 chr15 37816517 37816897 -65678077 + RLTR19-int LTR ERVK 3386 3748 -2389 5 873 2565 90 153 3 chr15 37816928 37817308 -65677666 + RLTR9B LTR ERVK 1 437 0 5 873 412 301 24 18 chr15 37817429 37817598 -65677376 + ETnERV-int LTR ERVK 109 278 -3036 5 873 407 19 19 0 chr15 37817635 37817687 -65677287 + (TAAAA)n Simple_repeat Simple_repeat 4 56 0 5 873 360 0 0 0 chr15 37817717 37817757 -65677217 + (GA)n Simple_repeat Simple_repeat 1 40 0 5 873 1491 157 71 127 chr15 37817757 37818136 -65676838 + ETnERV2-int LTR ERVK 2092 2449 -4795 5 873 929 217 111 0 chr15 37818139 37818356 -65676618 + MYSERV6-int LTR ERVK 8385 8625 -334 5 873 5130 110 42 69 chr15 37818344 37819255 -65675719 + ETnERV2-int LTR ERVK 2860 3758 -3648 5 873 1196 61 0 0 chr15 37819255 37819402 -65675572 + B1_Mus2 SINE Alu 1 147 0 5 873 5130 110 42 69 chr15 37819402 37819473 -65675501 + ETnERV2-int LTR ERVK 3759 3815 -3591 5 873 785 226 102 96 chr15 37819476 37819723 -65675251 + ETnERV2-int LTR ERVK 2610 2750 -488 5 873 603 60 0 0 chr15 37819723 37819807 -65675167 + (TC)n Simple_repeat Simple_repeat 1 84 0 5 873 785 215 76 99 chr15 37819807 37819915 -65675059 + ETnERV2-int LTR ERVK 2751 2865 -373 5 873 514 43 0 0 chr15 37820027 37820096 -65674878 - RMER16 LTR ERVK 0 533 465 5 873 1104 225 94 14 chr15 37820087 37820384 -65674590 - RMER16 LTR ERVK -212 321 1 5 873 592 168 24 61 chr15 37820435 37820600 -65674374 + RMER10A LTR ERVL 284 442 0 5 873 2169 161 37 59 chr15 37820717 37820886 -65674088 - RLTR41 LTR ERV1 0 446 282 5 873 3051 76 2 8 chr15 37820886 37821284 -65673690 - MTA_Mm LTR MaLR 0 396 1 5 873 2169 161 37 59 chr15 37821284 37821570 -65673404 - RLTR41 LTR ERV1 -165 281 1 5 873 238 313 24 0 chr15 37821581 37821664 -65673310 - MLT1F2 LTR MaLR -475 85 1 5 873 4052 83 26 26 chr15 37822546 37823117 -65671857 - RLTR45-int LTR ERVK -6673 571 1 5 873 3292 64 27 37 chr15 37823117 37823604 -65671370 - RLTR45 LTR ERVK 0 482 1 5 873 1483 162 47 35 chr15 37823875 37824214 -65670760 - RLTR15 LTR ERVK -16 343 1 5 873 3554 174 41 21 chr15 37824256 37824962 -65670012 - MYSERV6-int LTR ERVK -41 8918 8199 5 873 224 59 0 29 chr15 37825149 37825184 -65669790 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 5 873 202 315 20 20 chr15 37825287 37825433 -65669541 + T-rich Low_complexity Low_complexity 4 149 0 5 873 208 139 0 0 chr15 37825672 37825708 -65669266 + (T)n Simple_repeat Simple_repeat 1 36 0 5 873 1619 165 59 72 chr15 37825708 37826081 -65668893 - RLTR17 LTR ERVK -324 368 1 5 873 7980 169 52 53 chr15 37826082 37827921 -65667053 - RMER3D-int LTR ERVK -1 2841 485 5 873 579 178 34 0 chr15 37827937 37828055 -65666919 - RMER3D-int LTR ERVK -2232 610 489 5 873 1694 203 64 77 chr15 37828091 37828736 -65666238 - RMER3D-int LTR ERVK -1990 852 2 5 873 2219 159 31 21 chr15 37828789 37829212 -65665762 - RLTR17 LTR ERVK -114 578 152 5 873 213 39 0 0 chr15 37829313 37829339 -65665635 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 5 873 1540 146 64 18 chr15 37830107 37830434 -65664540 - RLTR15 LTR ERVK -17 342 1 5 873 2295 142 45 11 chr15 37831481 37831859 -65663115 - ORR1B1 LTR MaLR -3 391 1 5 873 541 264 62 87 chr15 37832074 37832315 -65662659 + RLTR12B LTR ERVK 39 273 -255 5 873 342 0 0 0 chr15 37832413 37832451 -65662523 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 5 873 1624 40 0 10 chr15 37832476 37832677 -65662297 + L1_Mus1 LINE L1 6369 6567 0 5 873 423 0 0 0 chr15 37832713 37832760 -65662214 + (GA)n Simple_repeat Simple_repeat 2 48 0 5 873 4731 145 71 36 chr15 37833415 37834275 -65660699 - RMER19B LTR ERVK -12 890 1 5 873 243 0 0 0 chr15 37834345 37834372 -65660602 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 5 873 311 252 8 108 chr15 37834373 37834493 -65660481 + MT2B LTR ERVL 151 258 -343 5 873 450 263 50 0 chr15 37834396 37834495 -65660479 + PB1D7 SINE Alu 11 114 -6 5 873 297 222 30 0 chr15 37834495 37834594 -65660380 + GA-rich Low_complexity Low_complexity 1 102 0 5 873 444 242 24 97 chr15 37834599 37834764 -65660210 + B4A SINE B4 1 153 -139 5 873 207 196 0 51 chr15 37834887 37834946 -65660028 + GA-rich Low_complexity Low_complexity 2 57 0 5 873 396 278 94 14 chr15 37835078 37835287 -65659687 - MIR SINE MIR -28 234 5 5 873 336 102 0 0 chr15 37836706 37836755 -65658219 + (GGA)n Simple_repeat Simple_repeat 2 50 0 5 873 1431 221 43 83 chr15 37837359 37837754 -65657220 + MTE2a LTR MaLR 1 379 0 5 873 644 153 41 0 chr15 37837798 37837968 -65657006 + CT-rich Low_complexity Low_complexity 2 178 0 5 873 511 282 0 9 chr15 37838048 37838159 -65656815 - PB1D10 SINE Alu -7 110 1 5 873 399 21 0 0 chr15 37838179 37838227 -65656747 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 5 873 262 397 24 0 chr15 37838710 37838836 -65656138 + MIR SINE MIR 13 141 -121 5 873 1750 224 97 68 chr15 37840047 37840117 -65654857 - RLTR20B3 LTR ERVK -14 563 482 5 873 180 77 0 0 chr15 37840117 37840143 -65654831 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 873 1750 224 97 68 chr15 37840143 37840600 -65654374 - RLTR20B3 LTR ERVK -96 481 23 5 873 3474 42 3 0 chr15 37841359 37841743 -65653231 + IAPEY_LTR LTR ERVK 1 385 0 5 873 255 235 90 45 chr15 37842054 37842143 -65652831 + RMER10A LTR ERVL 18 110 -332 5 873 19134 85 9 16 chr15 37842156 37845585 -65649389 - L1_Mus2 LINE L1 0 6566 3156 5 873 1445 66 28 0 chr15 37845585 37845767 -65649207 - B2_Mm1t SINE B2 -5 188 2 5 873 19134 96 9 20 chr15 37845767 37845798 -65649176 - L1_Mus2 LINE L1 -2728 3155 3133 5 873 1261 216 35 21 chr15 37846487 37846771 -65648203 + RLTR42-int LTR ERVK 1106 1393 -4129 5 873 3817 175 32 32 chr15 37847003 37847712 -65647262 + RMER1B Other Other 353 1061 -5 5 873 251 216 20 0 chr15 37847806 37847857 -65647117 + RLTR42-int LTR ERVK 1555 1606 -3916 5 873 1310 130 135 103 chr15 37848183 37848532 -65646442 + RLTR42-int LTR ERVK 1870 2237 -3285 5 873 1451 249 90 32 chr15 37848532 37849030 -65645944 + RLTR11A2 LTR ERVK 1 527 0 5 873 1310 273 88 142 chr15 37849030 37850337 -65644637 + RLTR42-int LTR ERVK 2238 3700 -2437 5 873 450 0 0 0 chr15 37850385 37850435 -65644539 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 873 619 221 62 163 chr15 37850435 37850843 -65644131 + RLTR42-int LTR ERVK 3699 3969 -2168 5 873 460 173 12 12 chr15 37851283 37851365 -65643609 + RLTR42-int LTR ERVK 4259 4340 -1797 5 873 260 229 54 151 chr15 37851694 37851879 -65643095 + RMER10A LTR ERVL 253 419 -23 5 873 1113 165 19 14 chr15 37852045 37852254 -65642720 + MTC LTR MaLR 1 210 -211 5 873 1082 101 69 53 chr15 37852254 37852443 -65642531 + B2_Mm2 SINE B2 2 193 -2 5 873 236 135 25 75 chr15 37852465 37852545 -65642429 + GA-rich Low_complexity Low_complexity 3 78 0 5 873 1234 133 75 9 chr15 37852545 37852757 -65642217 + MTC LTR MaLR 196 421 0 5 873 616 236 36 54 chr15 37852904 37853070 -65641904 - RSINE1 SINE B4 0 165 3 5 873 704 150 15 0 chr15 37853252 37853385 -65641589 - URR1B DNA MER1_type -5 220 86 5 873 36 53 0 0 chr15 37854055 37854112 -65640862 + AT_rich Low_complexity Low_complexity 1 57 0 5 873 320 295 20 11 chr15 37854150 37854263 -65640711 + B1F1 SINE Alu 1 120 0 5 873 243 0 0 0 chr15 37854557 37854584 -65640390 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 873 272 211 14 0 chr15 37855391 37855462 -65639512 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 873 291 211 70 0 chr15 37855465 37855522 -65639452 - B4A SINE B4 -218 74 14 5 873 399 271 90 9 chr15 37856449 37856610 -65638364 - MIRb SINE MIR -75 187 18 5 873 405 241 43 35 chr15 37856847 37856963 -65638011 - PB1D9 SINE Alu 0 120 4 5 873 1243 61 7 0 chr15 37858005 37858152 -65636822 + B1_Mus1 SINE Alu 1 148 0 5 873 1309 195 169 25 chr15 37858433 37858759 -65636215 + ORR1D1 LTR MaLR 1 373 -1 5 873 757 299 132 11 chr15 37858981 37859262 -65635712 + ORR1E LTR MaLR 1 315 -44 5 873 890 201 99 11 chr15 37860063 37860254 -65634720 + B3 SINE B2 2 209 -7 5 873 183 162 0 0 chr15 37860257 37860294 -65634680 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 873 81 11 0 0 chr15 37860335 37860423 -65634551 + AT_rich Low_complexity Low_complexity 1 88 0 5 873 1472 181 138 42 chr15 37860532 37860866 -65634108 + ORR1D1 LTR MaLR 5 370 -4 5 873 1177 233 5 0 chr15 37861060 37861275 -65633699 + B3 SINE B2 1 216 0 5 873 23 0 0 0 chr15 37861278 37861301 -65633673 + AT_rich Low_complexity Low_complexity 1 23 0 5 873 951 255 105 22 chr15 37861799 37862112 -65632862 + MTEb LTR MaLR 1 339 -40 5 873 437 264 26 71 chr15 37863082 37863237 -65631737 + ID_B1 SINE B4 73 220 -4 5 873 866 262 29 14 chr15 37863250 37863459 -65631515 + ID_B1 SINE B4 8 219 -5 5 873 1284 48 7 0 chr15 37863471 37863617 -65631357 + B1_Mus1 SINE Alu 2 148 0 5 873 243 0 0 0 chr15 37863620 37863647 -65631327 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 873 639 264 52 0 chr15 37863650 37863805 -65631169 + RSINE1 SINE B4 1 163 -2 5 873 23 68 0 0 chr15 37863830 37863874 -65631100 + AT_rich Low_complexity Low_complexity 1 44 0 5 873 332 43 22 0 chr15 37863918 37863964 -65631010 + (TA)n Simple_repeat Simple_repeat 1 47 0 6 873 832 140 0 75 chr15 37864010 37864157 -65630817 + B1_Mus1 SINE Alu 12 147 -1 6 873 739 247 14 0 chr15 37864653 37864799 -65630175 + B1_Mur1 SINE Alu 1 148 -1 6 873 488 254 18 0 chr15 37864950 37865060 -65629914 + PB1D10 SINE Alu 6 117 0 6 873 813 223 35 20 chr15 37865332 37865533 -65629441 + B3 SINE B2 2 205 -11 6 873 779 181 27 0 chr15 37865773 37865922 -65629052 + Lx5 LINE L1 6141 6293 -757 6 873 3354 160 3 28 chr15 37865927 37866501 -65628473 + Lx5 LINE L1 6396 6955 -95 6 873 420 20 0 0 chr15 37867360 37867409 -65627565 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 873 21 0 0 0 chr15 37867808 37867829 -65627145 + AT_rich Low_complexity Low_complexity 1 21 0 6 873 1689 236 80 24 chr15 37868052 37868583 -65626391 + Lx5 LINE L1 6494 7032 -18 6 873 24 32 0 0 chr15 37868695 37868726 -65626248 + AT_rich Low_complexity Low_complexity 1 31 0 6 873 401 276 48 0 chr15 37869017 37869122 -65625852 + B4A SINE B4 44 153 -139 6 873 206 176 0 19 chr15 37869252 37869304 -65625670 + CT-rich Low_complexity Low_complexity 3 53 0 6 873 962 253 65 36 chr15 37869502 37869809 -65625165 + Lx8 LINE L1 7156 7471 -2 6 873 803 228 89 6 chr15 37869839 37870007 -65624967 + B3A SINE B2 1 182 -16 6 873 200 200 18 0 chr15 37870191 37870246 -65624728 + GA-rich Low_complexity Low_complexity 2 57 0 6 873 396 0 0 0 chr15 37870279 37870323 -65624651 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 873 1395 57 102 0 chr15 37870747 37870923 -65624051 - B2_Mm2 SINE B2 -1 194 1 6 873 297 0 0 0 chr15 37870957 37870990 -65623984 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 6 873 1253 48 0 7 chr15 37870990 37871126 -65623848 - B1_Mm SINE Alu -11 136 1 6 873 282 306 11 45 chr15 37871620 37871709 -65623265 + RSINE1 SINE B4 78 163 -2 6 873 461 255 49 86 chr15 37871752 37871915 -65623059 + RSINE1 SINE B4 1 157 -8 6 873 25 0 0 0 chr15 37871940 37871965 -65623009 + AT_rich Low_complexity Low_complexity 1 25 0 6 873 399 236 53 35 chr15 37871966 37872080 -65622894 + PB1D10 SINE Alu 2 117 0 6 873 4716 61 0 7 chr15 37872420 37873006 -65621968 - L1_Mus1 LINE L1 0 6567 5998 6 873 261 79 0 0 chr15 37873006 37873031 -65621943 + (T)n Simple_repeat Simple_repeat 1 25 0 6 873 3555 63 17 11 chr15 37873549 37874128 -65620846 - L1_Mus1 LINE L1 -562 6020 5437 6 873 416 179 13 13 chr15 37875039 37875118 -65619856 + PB1D10 SINE Alu 31 109 -8 6 873 597 271 125 0 chr15 37875129 37875273 -65619701 + RSINE1 SINE B4 4 165 0 6 873 214 312 12 48 chr15 37875379 37875463 -65619511 - ID4_ SINE ID 0 83 3 6 873 269 329 57 0 chr15 37875517 37875587 -65619387 - ID4_ SINE ID -9 74 1 6 873 223 257 26 26 chr15 37875909 37875989 -65618985 - ID4 SINE ID -2 81 2 6 873 659 285 52 39 chr15 37876130 37876360 -65618614 + B4A SINE B4 55 287 -5 6 873 240 243 30 168 chr15 37876739 37876942 -65618032 + L1MA8 LINE L1 6092 6266 -25 6 873 1466 79 21 16 chr15 37876969 37877162 -65617812 + B2_Mm2 SINE B2 2 195 0 6 873 24 0 0 0 chr15 37877304 37877328 -65617646 + AT_rich Low_complexity Low_complexity 1 24 0 6 873 326 215 26 127 chr15 37877704 37877820 -65617154 - MLT1A0 LTR MaLR -3 405 258 6 873 261 254 45 0 chr15 37877820 37877887 -65617087 + MTD LTR MaLR 1 70 -349 6 873 3099 197 119 124 chr15 37877880 37878864 -65616110 + MTD-int LTR MaLR 156 1145 -113 6 873 1116 130 33 17 chr15 37878864 37879044 -65615930 + B2_Mm2 SINE B2 1 183 -12 6 873 3099 197 119 124 chr15 37879044 37879168 -65615806 + MTD-int LTR MaLR 1146 1258 0 6 873 1452 190 266 0 chr15 37879168 37879499 -65615475 + MTD LTR MaLR 1 419 0 6 873 1175 219 5 5 chr15 37879527 37879733 -65615241 - B3 SINE B2 -10 206 1 6 874 196 304 89 0 chr15 37880144 37880200 -65614774 - L2a LINE L2 -15 3411 3351 6 874 428 265 175 0 chr15 37881468 37881668 -65613306 - MIR SINE MIR -11 251 17 6 874 237 65 0 0 chr15 37881692 37881723 -65613251 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 6 874 590 296 28 7 chr15 37881771 37881914 -65613060 - RSINE1 SINE B4 -17 148 3 6 874 1024 138 0 20 chr15 37882420 37882568 -65612406 - B1_Mus2 SINE Alu -2 145 1 6 874 241 237 85 0 chr15 37882641 37882700 -65612274 + RSINE1 SINE B4 3 66 -99 6 874 792 269 71 0 chr15 37882813 37883010 -65611964 + B3 SINE B2 5 215 -1 6 874 209 176 39 51 chr15 37883165 37883243 -65611731 + (TTTAA)n Simple_repeat Simple_repeat 2 78 0 6 874 204 111 0 0 chr15 37883512 37883548 -65611426 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 6 874 210 311 200 0 chr15 37883690 37883780 -65611194 + MIRb SINE MIR 85 192 -76 6 874 1721 26 11 0 chr15 37884237 37884428 -65610546 - B2_Mm1a SINE B2 0 193 1 6 874 289 261 58 37 chr15 37884601 37884693 -65610281 + PB1D10 SINE Alu 1 99 -21 6 874 342 0 0 0 chr15 37884775 37884813 -65610161 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 874 1400 143 0 9 chr15 37885033 37885245 -65609729 - URR1B DNA MER1_type 0 225 16 6 874 618 193 34 0 chr15 37885296 37885415 -65609559 + B1_Mus2 SINE Alu 25 147 0 6 874 1430 65 37 11 chr15 37885944 37886131 -65608843 + B2_Mm2 SINE B2 3 194 -1 6 874 294 219 19 9 chr15 37886243 37886349 -65608625 + (TA)n Simple_repeat Simple_repeat 1 107 0 6 874 210 91 0 0 chr15 37886988 37887021 -65607953 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 874 1112 73 58 0 chr15 37887457 37887594 -65607380 + B1_Mus1 SINE Alu 1 145 -3 6 874 228 86 0 0 chr15 37887594 37887629 -65607345 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 874 309 276 204 77 chr15 37887807 37888003 -65606971 + ID_B1 SINE B4 2 222 -2 6 874 207 214 0 35 chr15 37888003 37888061 -65606913 + GA-rich Low_complexity Low_complexity 2 57 0 6 874 185 108 0 26 chr15 37888126 37888164 -65606810 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 6 874 366 23 0 0 chr15 37889002 37889045 -65605929 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 874 181 274 63 16 chr15 37889238 37889301 -65605673 - MER5A DNA MER1_type -3 186 121 6 874 198 0 0 0 chr15 37889444 37889466 -65605508 + (A)n Simple_repeat Simple_repeat 1 22 0 6 874 252 0 0 0 chr15 37889841 37889869 -65605105 + (A)n Simple_repeat Simple_repeat 1 28 0 6 874 22 0 0 0 chr15 37890936 37890958 -65604016 + GC_rich Low_complexity Low_complexity 1 22 0 6 874 210 350 145 18 chr15 37891548 37891714 -65603260 - MIR SINE MIR -10 252 66 6 874 276 188 172 0 chr15 37891899 37891963 -65603011 + ID4_ SINE ID 2 76 -7 6 874 380 248 34 50 chr15 37892024 37892143 -65602831 + PB1D10 SINE Alu 1 117 0 6 874 340 263 273 0 chr15 37892939 37893038 -65601936 - B3A SINE B2 -36 162 37 6 874 741 193 62 7 chr15 37893490 37893631 -65601343 + B3 SINE B2 2 151 -65 6 874 409 62 15 15 chr15 37893631 37893697 -65601277 + (CATA)n Simple_repeat Simple_repeat 1 66 0 6 874 462 296 72 0 chr15 37894961 37895086 -65599888 - RSINE1 SINE B4 -20 145 12 6 874 234 0 0 0 chr15 37896120 37896146 -65598828 + (A)n Simple_repeat Simple_repeat 1 26 0 6 874 23 68 0 0 chr15 37896227 37896271 -65598703 + AT_rich Low_complexity Low_complexity 1 44 0 6 874 696 24 0 0 chr15 37896751 37896833 -65598141 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 6 874 1161 220 105 10 chr15 37898364 37898754 -65596220 + Lx9 LINE L1 7210 7636 -8 6 874 689 234 82 0 chr15 37899617 37899801 -65595173 + B3 SINE B2 1 199 -17 6 874 1006 80 0 0 chr15 37900466 37900604 -65594370 + B1_Mus1 SINE Alu 6 143 -5 6 874 223 269 39 0 chr15 37900605 37900657 -65594317 - MER5A DNA MER1_type -111 78 25 6 874 494 187 72 16 chr15 37900812 37900931 -65594043 + PB1D9 SINE Alu 8 124 -25 6 874 236 278 42 0 chr15 37901261 37901333 -65593641 - PB1D10 SINE Alu -3 114 40 6 874 224 296 128 9 chr15 37902080 37902189 -65592785 - MIR SINE MIR -113 149 28 6 874 320 311 91 87 chr15 37902241 37902516 -65592458 + MER68 LTR ERVL 7 282 -281 6 874 474 18 0 0 chr15 37902891 37902946 -65592028 + (TG)n Simple_repeat Simple_repeat 1 55 0 6 874 403 211 14 0 chr15 37903314 37903385 -65591589 - ID4 SINE ID -10 73 2 6 874 774 292 112 60 chr15 37903958 37904527 -65590447 + Lx8 LINE L1 6685 7283 -190 6 874 222 205 0 0 chr15 37905483 37905522 -65589452 + (CATA)n Simple_repeat Simple_repeat 4 42 0 6 874 263 265 92 25 chr15 37905607 37905702 -65589272 + B1F1 SINE Alu 1 102 -47 6 874 392 213 0 0 chr15 37905702 37905777 -65589197 + ID4_ SINE ID 3 77 -6 6 874 263 265 92 25 chr15 37905777 37905801 -65589173 + B1F1 SINE Alu 103 128 -21 6 874 207 214 0 0 chr15 37906192 37906234 -65588740 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 6 874 971 220 33 9 chr15 37906247 37906458 -65588516 - B3 SINE B2 0 216 1 6 874 288 350 50 0 chr15 37906499 37906599 -65588375 + ID_B1 SINE B4 4 108 -116 6 874 295 221 87 14 chr15 37906596 37906665 -65588309 + PB1 SINE Alu 52 125 -2 6 874 306 273 50 62 chr15 37906682 37906842 -65588132 - L1MEf LINE L1 -4705 1495 1338 6 874 307 252 47 75 chr15 37907951 37908058 -65586916 + PB1D10 SINE Alu 13 116 -1 6 874 1903 175 55 35 chr15 37908345 37908712 -65586262 + ORR1C1 LTR MaLR 5 378 0 6 874 250 369 112 37 chr15 37908810 37909052 -65585922 + Charlie16a DNA MER1_type 75 334 -8 6 874 518 306 40 7 chr15 37909301 37909449 -65585525 - B3 SINE B2 -61 155 3 6 874 574 49 0 24 chr15 37911478 37911562 -65583412 + (TG)n Simple_repeat Simple_repeat 2 83 0 6 874 630 39 0 0 chr15 37911634 37911711 -65583263 + (TG)n Simple_repeat Simple_repeat 2 78 0 7 874 332 319 83 16 chr15 37911780 37911901 -65583073 - B4A SINE B4 -163 129 1 7 874 1098 89 0 0 chr15 37912169 37912315 -65582659 - B1_Mm SINE Alu 0 147 2 7 874 565 223 8 43 chr15 37912458 37912575 -65582399 - RSINE1 SINE B4 -18 147 35 7 874 1144 64 0 0 chr15 37913032 37913173 -65581801 - B1_Mus2 SINE Alu -5 142 2 7 874 207 95 47 23 chr15 37913231 37913274 -65581700 + A-rich Low_complexity Low_complexity 4 47 0 7 874 280 315 41 0 chr15 37914191 37914264 -65580710 - B1F1 SINE Alu -21 128 53 7 874 527 265 7 45 chr15 37914546 37914700 -65580274 + B1F SINE Alu 1 148 -1 7 874 207 0 0 0 chr15 37914767 37914790 -65580184 + (A)n Simple_repeat Simple_repeat 1 23 0 7 874 234 311 0 0 chr15 37915162 37915223 -65579751 + (TG)n Simple_repeat Simple_repeat 1 61 0 7 874 740 231 239 9 chr15 37915244 37915462 -65579512 - B4A SINE B4 -16 276 9 7 874 26 30 0 0 chr15 37915506 37915539 -65579435 + AT_rich Low_complexity Low_complexity 1 33 0 7 874 885 67 118 0 chr15 37916071 37916190 -65578784 + B1_Mm SINE Alu 1 133 -14 7 874 591 40 0 0 chr15 37916200 37916274 -65578700 + (GAGAA)n Simple_repeat Simple_repeat 4 77 0 7 874 1210 92 6 0 chr15 37917354 37917517 -65577457 + B2_Mm2 SINE B2 2 165 -30 7 874 1141 13 41 38 chr15 37917517 37917832 -65577142 + (CAGAG)n Simple_repeat Simple_repeat 1 316 0 7 874 216 0 0 0 chr15 37917858 37917882 -65577092 + (CAGAG)n Simple_repeat Simple_repeat 2 25 0 7 874 265 253 12 74 chr15 37919515 37919596 -65575378 + ID4 SINE ID 2 77 -6 7 874 227 191 0 0 chr15 37919598 37919640 -65575334 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 874 436 207 168 32 chr15 37919688 37919813 -65575161 - B1F2 SINE Alu -7 142 1 7 874 1107 191 39 5 chr15 37920437 37920642 -65574332 - URR1B DNA MER1_type 0 225 14 7 874 268 302 0 0 chr15 37921229 37921292 -65573682 - RSINE1 SINE B4 -1 164 102 7 874 601 260 26 67 chr15 37922022 37922216 -65572758 + B3 SINE B2 2 187 -29 7 874 292 315 68 38 chr15 37922262 37922394 -65572580 - MER5A DNA MER1_type -52 137 2 7 874 866 190 240 42 chr15 37922398 37922706 -65572268 + MTD LTR MaLR 3 371 -48 7 874 4986 55 0 2 chr15 37922961 37923578 -65571396 + L1_Mus1 LINE L1 5952 6567 0 7 874 228 190 0 49 chr15 37923598 37923659 -65571315 + L1ME1 LINE L1 5141 5198 -948 7 874 585 293 60 95 chr15 37923672 37923872 -65571102 + B3A SINE B2 1 193 0 7 874 251 25 150 0 chr15 37923941 37923981 -65570993 + RLTR12B LTR ERVK 11 56 -472 7 874 225 326 77 14 chr15 37924095 37924238 -65570736 + RLTR15 LTR ERVK 189 340 -19 7 874 290 273 142 26 chr15 37924694 37925019 -65569955 + L1ME1 LINE L1 5570 5940 -238 7 874 950 202 40 0 chr15 37925232 37925430 -65569544 - B3 SINE B2 -8 208 3 7 874 388 186 43 0 chr15 37928735 37928805 -65566169 - PB1D10 SINE Alu -13 104 32 7 874 800 105 98 0 chr15 37928845 37928978 -65565996 + B1_Mus2 SINE Alu 2 147 0 7 874 204 125 0 0 chr15 37928978 37929010 -65565964 + (A)n Simple_repeat Simple_repeat 1 32 0 7 874 245 204 41 0 chr15 37929196 37929245 -65565729 - RSINE1 SINE B4 -102 63 13 7 874 582 293 34 10 chr15 37929280 37929487 -65565487 + ID_B1 SINE B4 2 213 -11 7 874 646 145 44 30 chr15 37931131 37931266 -65563708 - B1_Mur4 SINE Alu 0 150 14 7 874 236 261 81 101 chr15 37931137 37931270 -65563704 - B4A SINE B4 -71 221 95 7 874 2037 196 86 6 chr15 37931270 37931738 -65563236 + RLTR16 LTR ERVK 1 505 0 7 874 236 261 81 101 chr15 37931738 37931753 -65563221 - B4A SINE B4 -198 94 76 7 874 470 154 33 0 chr15 37931757 37931848 -65563126 - L1_Mur3 LINE L1 -3025 2855 2762 7 874 215 173 0 19 chr15 37932584 37932637 -65562337 + (TATG)n Simple_repeat Simple_repeat 3 54 0 7 874 22 35 0 0 chr15 37933138 37933167 -65561807 + AT_rich Low_complexity Low_complexity 1 29 0 7 874 445 153 41 0 chr15 37934143 37934241 -65560733 + GA-rich Low_complexity Low_complexity 3 104 0 7 874 446 331 41 7 chr15 37934946 37935092 -65559882 - RSINE1 SINE B4 -13 152 2 7 874 182 62 31 0 chr15 37935973 37936005 -65558969 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 7 874 192 48 23 45 chr15 37936069 37936113 -65558861 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 7 874 891 85 139 32 chr15 37936678 37936836 -65558138 + B2_Mm2 SINE B2 2 176 -19 7 874 1098 75 0 39 chr15 37937177 37937330 -65557644 + B1_Mus2 SINE Alu 1 147 0 7 874 495 162 80 10 chr15 37937858 37937958 -65557016 + B1_Mur1 SINE Alu 42 148 -1 7 874 289 273 154 47 chr15 37943943 37943990 -65550984 + B3 SINE B2 3 54 -162 7 874 617 197 148 8 chr15 37943990 37944118 -65550856 + B1_Mur4 SINE Alu 5 150 0 7 874 289 273 154 47 chr15 37944118 37944239 -65550735 + B3 SINE B2 55 189 -27 7 874 472 269 85 57 chr15 37944252 37944429 -65550545 + B3A SINE B2 1 182 -16 7 874 599 227 47 0 chr15 37945349 37945477 -65549497 + RSINE1 SINE B4 1 134 -31 7 874 1466 81 0 0 chr15 37945543 37945729 -65549245 + L1_Mus1 LINE L1 6382 6567 0 7 874 585 273 105 16 chr15 37945912 37946102 -65548872 + B3 SINE B2 5 211 -5 7 874 351 336 40 20 chr15 37946912 37947061 -65547913 + RSINE1 SINE B4 4 155 -10 7 874 192 152 0 0 chr15 37947074 37947107 -65547867 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 874 22 0 0 0 chr15 37949472 37949494 -65545480 + GC_rich Low_complexity Low_complexity 1 22 0 7 874 386 269 43 61 chr15 37949679 37949794 -65545180 - ID_B1 SINE B4 -19 205 93 7 874 21 0 0 0 chr15 37949896 37949917 -65545057 + AT_rich Low_complexity Low_complexity 1 21 0 7 874 1004 248 61 36 chr15 37950727 37951148 -65543826 + MT2A LTR ERVL 4 589 -12 7 874 1330 27 0 13 chr15 37952331 37952481 -65542493 - B1_Mus1 SINE Alu 0 148 1 7 874 216 196 0 0 chr15 37952875 37952921 -65542053 + A-rich Low_complexity Low_complexity 1 46 0 7 874 312 211 5 80 chr15 37952928 37953042 -65541932 - B1_Mur1 SINE Alu -17 132 4 7 874 407 227 61 108 chr15 37953321 37953469 -65541505 - B1_Mur1 SINE Alu -4 145 5 7 874 28 29 0 0 chr15 37953575 37953610 -65541364 + AT_rich Low_complexity Low_complexity 1 35 0 7 874 617 169 124 51 chr15 37953710 37953847 -65541127 - B1_Mus1 SINE Alu 0 148 2 7 874 365 208 14 0 chr15 37954268 37954352 -65540622 + B3 SINE B2 9 93 -105 7 874 238 260 82 0 chr15 37955057 37955130 -65539844 + B1F SINE Alu 1 79 -70 7 874 207 100 0 0 chr15 37955146 37955176 -65539798 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 7 874 447 241 0 256 chr15 37955613 37955808 -65539166 + B1_Mur2 SINE Alu 2 146 -3 7 874 708 249 74 30 chr15 37956242 37956443 -65538531 - URR1B DNA MER1_type 0 225 16 7 874 1015 219 39 0 chr15 37956443 37956648 -65538326 + B3 SINE B2 2 214 -2 7 874 334 350 66 28 chr15 37957606 37957712 -65537262 - RSINE1 SINE B4 -11 154 45 7 874 387 0 0 0 chr15 37958841 37958884 -65536090 + (CATA)n Simple_repeat Simple_repeat 4 46 0 7 874 763 255 32 5 chr15 37959549 37959738 -65535236 + B3A SINE B2 1 194 -4 7 874 336 306 96 7 chr15 37960054 37960189 -65534785 + RSINE1 SINE B4 5 151 -14 7 874 222 261 130 0 chr15 37962213 37962282 -65532692 + PB1D10 SINE Alu 7 84 -33 7 874 198 423 0 13 chr15 37963178 37963257 -65531717 + L2b LINE L2 3121 3198 -177 7 874 357 268 134 0 chr15 37963820 37963917 -65531057 - B1F1 SINE Alu -36 113 4 7 874 257 286 150 33 chr15 37964684 37964793 -65530181 - L1MB1 LINE L1 -266 5923 5796 7 874 438 20 0 0 chr15 37964793 37964844 -65530130 + (TG)n Simple_repeat Simple_repeat 1 51 0 7 874 369 0 0 0 chr15 37964844 37964884 -65530090 + (GA)n Simple_repeat Simple_repeat 1 41 0 7 874 257 289 149 32 chr15 37964884 37965017 -65529957 - L1MB1 LINE L1 -496 5795 5653 7 874 567 242 229 6 chr15 37965294 37965460 -65529514 + B3 SINE B2 4 206 -10 7 874 26 0 0 0 chr15 37965595 37965621 -65529353 + AT_rich Low_complexity Low_complexity 1 26 0 7 874 234 0 0 0 chr15 37965735 37965761 -65529213 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 874 563 187 56 9 chr15 37965765 37965873 -65529101 - PB1D9 SINE Alu -7 113 1 7 874 234 143 0 45 chr15 37966283 37966349 -65528625 + G-rich Low_complexity Low_complexity 5 67 0 7 874 212 217 0 42 chr15 37966355 37966403 -65528571 + polypurine Low_complexity Low_complexity 3 48 0 7 874 270 29 0 0 chr15 37966765 37966799 -65528175 - ID_B1 SINE B4 -10 214 181 7 874 244 99 99 0 chr15 37966799 37966813 -65528161 - B1F SINE Alu -10 139 48 7 874 22 109 0 0 chr15 37967932 37968024 -65526950 + AT_rich Low_complexity Low_complexity 1 92 0 7 874 1419 193 187 30 chr15 37968069 37968433 -65526541 + MTC LTR MaLR 1 421 0 7 874 486 243 45 9 chr15 37968744 37968856 -65526118 + PB1D9 SINE Alu 4 119 -1 7 874 567 0 0 0 chr15 37968857 37968920 -65526054 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 7 874 262 291 25 12 chr15 37969025 37969105 -65525869 + ID4 SINE ID 1 81 -2 7 874 1593 57 0 10 chr15 37969211 37969406 -65525568 + B2_Mm2 SINE B2 1 193 -2 7 874 387 83 0 0 chr15 37969705 37969765 -65525209 + (GA)n Simple_repeat Simple_repeat 2 61 0 7 874 303 28 0 0 chr15 37969767 37969803 -65525171 + (CAGG)n Simple_repeat Simple_repeat 2 37 0 7 874 1249 68 0 0 chr15 37969995 37970142 -65524832 - B1_Mm SINE Alu 0 147 1 7 874 21 0 0 0 chr15 37970366 37970387 -65524587 + GC_rich Low_complexity Low_complexity 1 21 0 7 874 37 0 0 0 chr15 37971720 37971757 -65523217 + AT_rich Low_complexity Low_complexity 1 37 0 8 874 283 271 235 0 chr15 37971911 37971996 -65522978 + PB1D10 SINE Alu 5 109 -8 8 874 253 278 71 65 chr15 37972038 37972192 -65522782 + B4A SINE B4 138 292 0 8 874 279 0 0 0 chr15 37973784 37973815 -65521159 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 874 501 17 0 0 chr15 37974502 37974560 -65520414 + (GA)n Simple_repeat Simple_repeat 1 58 0 8 874 525 101 0 0 chr15 37974602 37974671 -65520303 + B1_Mus1 SINE Alu 1 69 -79 8 874 346 67 0 0 chr15 37974669 37974714 -65520260 - B1_Mus2 SINE Alu -101 46 2 8 874 244 279 44 96 chr15 37974671 37974734 -65520240 + MT2B2 LTR ERVL 164 288 -296 8 874 681 223 0 75 chr15 37974913 37975073 -65519901 + B1_Mur2 SINE Alu 2 149 0 8 874 1222 48 14 0 chr15 37976264 37976409 -65518565 + B1_Mm SINE Alu 1 147 0 8 874 317 329 0 0 chr15 37976674 37976750 -65518224 + ID4 SINE ID 3 78 -5 8 874 21 36 0 0 chr15 37976880 37976908 -65518066 + AT_rich Low_complexity Low_complexity 1 28 0 8 874 453 218 142 47 chr15 37977590 37977696 -65517278 + B1_Mur2 SINE Alu 6 121 -28 8 874 215 267 33 16 chr15 37978210 37978271 -65516703 + ID_B1 SINE B4 74 135 -89 8 874 414 0 0 0 chr15 37978490 37978536 -65516438 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 874 342 0 0 0 chr15 37978536 37978573 -65516401 + (TC)n Simple_repeat Simple_repeat 2 39 0 8 874 24 32 0 0 chr15 37978639 37978670 -65516304 + AT_rich Low_complexity Low_complexity 1 31 0 8 874 223 312 92 15 chr15 37979556 37979568 -65515406 + ID_B1 SINE B4 82 219 -3 8 874 383 250 147 0 chr15 37979568 37979684 -65515290 + B1_Mur4 SINE Alu 13 145 -5 8 874 285 314 37 82 chr15 37979688 37979823 -65515151 + RSINE1 SINE B4 5 133 -32 8 874 259 247 35 12 chr15 37980039 37980125 -65514849 + PB1D10 SINE Alu 30 117 0 8 874 682 240 47 20 chr15 37980383 37980532 -65514442 + RSINE1 SINE B4 3 155 -10 8 874 180 0 0 0 chr15 37980975 37980995 -65513979 + (A)n Simple_repeat Simple_repeat 1 20 0 8 874 1103 102 30 0 chr15 37981232 37981398 -65513576 - B2_Mm2 SINE B2 -23 172 2 8 874 780 222 135 21 chr15 37982189 37982382 -65512592 - ID_B1 SINE B4 -9 215 1 8 874 351 160 82 12 chr15 37982745 37982839 -65512135 - PB1D9 SINE Alu 0 120 18 8 874 334 322 104 125 chr15 37983093 37983252 -65511722 - Charlie1a DNA MER1_type -770 685 564 8 874 1182 56 21 0 chr15 37983252 37983396 -65511578 - B1_Mus2 SINE Alu 0 147 1 8 874 334 323 105 119 chr15 37983396 37983847 -65511127 - Charlie1a DNA MER1_type -892 563 81 8 874 204 318 12 12 chr15 37984009 37984095 -65510879 + (CA)n Simple_repeat Simple_repeat 1 86 0 8 874 242 218 22 133 chr15 37984222 37984237 -65510737 + MT2B LTR ERVL 155 159 -442 8 874 406 209 141 0 chr15 37984237 37984348 -65510626 + B1_Mur1 SINE Alu 2 126 -23 8 874 511 195 30 89 chr15 37985339 37985474 -65509500 - B1_Mur1 SINE Alu -18 131 5 8 874 827 252 40 0 chr15 37986824 37987022 -65507952 - B3 SINE B2 -2 214 9 8 874 263 253 61 85 chr15 37987080 37987162 -65507812 + B3A SINE B2 1 80 -118 8 874 273 350 94 7 chr15 37987166 37987304 -65507670 + B4A SINE B4 100 249 -43 8 874 369 0 0 0 chr15 37987323 37987364 -65507610 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 874 186 43 0 0 chr15 37988180 37988203 -65506771 + (A)n Simple_repeat Simple_repeat 1 23 0 8 874 443 174 128 0 chr15 37988623 37988709 -65506265 - PB1D9 SINE Alu -22 98 2 8 874 249 109 0 0 chr15 37989315 37989361 -65505613 + (CAGA)n Simple_repeat Simple_repeat 1 46 0 8 874 225 0 0 0 chr15 37989507 37989532 -65505442 + (A)n Simple_repeat Simple_repeat 1 25 0 8 874 219 89 176 118 chr15 37989541 37989592 -65505382 + B3 SINE B2 1 54 -162 8 874 852 189 30 24 chr15 37990184 37990352 -65504622 - B3 SINE B2 -5 211 43 8 874 440 241 28 9 chr15 37990691 37990800 -65504174 - B1F2 SINE Alu -5 144 34 8 874 417 213 133 44 chr15 37991068 37991181 -65503793 + PB1D10 SINE Alu 10 132 -17 8 874 243 0 0 0 chr15 37991361 37991388 -65503586 + (A)n Simple_repeat Simple_repeat 1 27 0 8 874 266 253 40 13 chr15 37991880 37991956 -65503018 - ID4_ SINE ID -4 79 2 8 874 2439 130 32 5 chr15 37992038 37992440 -65502534 + MTC LTR MaLR 1 413 -8 8 874 225 202 98 105 chr15 37993297 37993430 -65501544 + MLT1H1 LTR MaLR 419 550 -5 8 874 367 313 75 99 chr15 37994380 37994674 -65500300 - B4A SINE B4 -4 288 2 8 874 659 147 96 52 chr15 37995042 37995178 -65499796 + B1_Mus2 SINE Alu 5 146 -1 8 874 243 0 0 0 chr15 37995403 37995430 -65499544 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 874 420 271 262 7 chr15 37995982 37996123 -65498851 + ID_B1 SINE B4 32 208 -16 8 874 294 125 0 0 chr15 37996139 37996187 -65498787 + (CAGG)n Simple_repeat Simple_repeat 2 49 0 8 874 284 189 38 0 chr15 37996192 37996245 -65498729 + PB1D9 SINE Alu 5 59 -61 8 874 496 183 92 42 chr15 37997163 37997283 -65497691 - RSINE1 SINE B4 -37 128 3 8 874 620 169 80 58 chr15 37997774 37997912 -65497062 - B1_Mur3 SINE Alu -8 141 1 8 874 346 250 36 0 chr15 37998464 37998548 -65496426 + PB1D10 SINE Alu 18 104 -13 8 874 219 188 0 0 chr15 37998966 37999014 -65495960 + CT-rich Low_complexity Low_complexity 3 50 0 8 874 363 105 0 0 chr15 37999262 37999319 -65495655 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 874 471 195 25 11 chr15 37999449 37999553 -65495421 - B1F SINE Alu -15 112 6 8 874 562 211 170 26 chr15 37999795 37999993 -65494981 - B3 SINE B2 -25 191 1 8 874 687 118 118 0 chr15 38000243 38000353 -65494621 + B1_Mur4 SINE Alu 3 125 -25 1 874 1302 95 16 0 chr15 38000498 38000687 -65494287 + B2_Mm1a SINE B2 1 192 -1 2 874 279 302 171 48 chr15 38000852 38000998 -65493976 + RSINE1 SINE B4 2 165 0 3 874 324 240 31 20 chr15 38001095 38001193 -65493781 + L1MC5 LINE L1 7818 7916 -45 4 874 203 147 0 0 chr15 38001317 38001351 -65493623 + (CACG)n Simple_repeat Simple_repeat 1 34 0 5 874 243 0 0 0 chr15 38001426 38001453 -65493521 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 874 420 210 150 60 chr15 38001529 38001696 -65493278 - B3A SINE B2 -16 182 1 7 874 514 296 99 17 chr15 38001803 38001975 -65492999 + ID_B1 SINE B4 2 187 -37 8 874 232 299 0 49 chr15 38001975 38002056 -65492918 + PB1D10 SINE Alu 33 109 -8 9 874 262 241 240 41 chr15 38002052 38002074 -65492900 + ID_B1 SINE B4 80 224 0 1 874 496 192 61 0 chr15 38002074 38002173 -65492801 + PB1D9 SINE Alu 16 120 0 1 874 1791 5 0 0 chr15 38002810 38003003 -65491971 + B2_Mm1a SINE B2 1 193 0 1 874 334 297 51 0 chr15 38003166 38003284 -65491690 - MER20 DNA MER1_type -3 216 93 1 874 349 231 100 18 chr15 38003461 38003571 -65491403 - B1_Mur2 SINE Alu 0 149 31 1 874 306 231 278 40 chr15 38004527 38004653 -65490321 + RSINE1 SINE B4 8 163 -2 1 874 286 275 21 32 chr15 38005024 38005118 -65489856 + B4 SINE B4 1 93 -199 1 874 678 246 43 19 chr15 38005295 38005506 -65489468 + B3 SINE B2 1 216 0 1 874 371 229 62 0 chr15 38005519 38005615 -65489359 + PB1D10 SINE Alu 3 104 -13 1 874 403 283 20 126 chr15 38005737 38005822 -65489152 + MT2B LTR ERVL 88 151 -450 1 874 1027 69 21 0 chr15 38005822 38005967 -65489007 + B1_Mus1 SINE Alu 1 148 0 2 874 736 218 40 55 chr15 38006008 38006207 -65488767 + ID_B1 SINE B4 7 202 -22 2 874 1309 14 0 0 chr15 38006575 38006722 -65488252 - B1_Mm SINE Alu 0 147 1 2 874 27 0 0 0 chr15 38007983 38008010 -65486964 + GC_rich Low_complexity Low_complexity 1 27 0 2 874 32 0 0 0 chr15 38008353 38008385 -65486589 + GC_rich Low_complexity Low_complexity 1 32 0 2 874 180 77 0 0 chr15 38008546 38008572 -65486402 + (CCG)n Simple_repeat Simple_repeat 2 27 0 2 874 212 164 0 52 chr15 38008621 38008679 -65486295 + G-rich Low_complexity Low_complexity 5 59 0 2 874 29 47 0 0 chr15 38008761 38008804 -65486170 + GC_rich Low_complexity Low_complexity 1 43 0 2 874 238 315 52 61 chr15 38009532 38009647 -65485327 + MT2B LTR ERVL 150 263 -338 2 874 616 210 59 0 chr15 38009557 38009676 -65485298 + B1_Mur1 SINE Alu 13 138 -11 2 874 227 338 108 0 chr15 38009790 38009864 -65485110 + MIRb SINE MIR 35 116 -152 3 874 640 161 52 30 chr15 38010044 38010178 -65484796 + B1_Mur4 SINE Alu 1 137 -13 3 874 947 118 7 0 chr15 38010702 38010837 -65484137 + B1_Mus1 SINE Alu 2 137 -11 3 109 323 192 13 0 chr15 38010862 38010940 -65484034 + CT-rich Low_complexity Low_complexity 3 81 0 3 875 1121 208 7 16 chr15 38010948 38011178 -65483796 + ORR1C2 LTR MaLR 150 384 0 3 875 5238 179 153 72 chr15 38011178 38012574 -65482400 + ORR1C2-int LTR MaLR 1 1509 0 3 875 341 167 44 29 chr15 38012576 38012644 -65482330 + ORR1C2 LTR MaLR 3 71 -313 3 875 267 257 56 14 chr15 38012735 38012806 -65482168 + PB1 SINE Alu 16 89 -38 3 875 1099 108 0 0 chr15 38012997 38013145 -65481829 + B1_Mus1 SINE Alu 1 148 0 3 875 257 128 21 0 chr15 38013145 38013192 -65481782 + (GAAA)n Simple_repeat Simple_repeat 3 50 0 3 875 2847 50 41 0 chr15 38013194 38013621 -65481353 + L1Md_F3 LINE L1 6190 6584 0 3 875 328 246 14 0 chr15 38013885 38013954 -65481020 - LTR16C LTR ERVL -7 531 462 3 875 1111 60 0 0 chr15 38013958 38014091 -65480883 + B1_Mus2 SINE Alu 2 134 -13 4 875 220 27 54 0 chr15 38014091 38014128 -65480846 + (CAAAA)n Simple_repeat Simple_repeat 1 39 0 4 875 799 179 127 0 chr15 38014208 38014381 -65480593 + B2_Mm2 SINE B2 1 195 0 4 875 584 159 69 26 chr15 38014768 38014884 -65480090 - B1_Mur4 SINE Alu 0 150 30 4 875 364 407 55 32 chr15 38014953 38015265 -65479709 - LTR16C LTR ERVL -95 394 76 3 875 379 294 93 22 chr15 38015318 38015457 -65479517 + B1F SINE Alu 1 149 0 4 875 521 266 45 60 chr15 38015468 38015668 -65479306 + B3A SINE B2 2 198 0 4 875 387 205 24 12 chr15 38015773 38015857 -65479117 + B1F2 SINE Alu 63 147 -2 4 875 355 352 59 45 chr15 38016026 38016246 -65478728 + ID_B1 SINE B4 1 223 -1 4 875 366 302 30 37 chr15 38016117 38016251 -65478723 + B1F SINE Alu 17 149 0 4 875 325 229 94 24 chr15 38016366 38016451 -65478523 + B1_Mus1 SINE Alu 6 96 -52 4 875 526 229 44 63 chr15 38016459 38016607 -65478367 - ID_B1 SINE B4 -13 211 84 5 875 996 111 21 0 chr15 38016607 38016751 -65478223 - B1_Mur3 SINE Alu 0 149 3 5 875 255 344 73 96 chr15 38016751 38016799 -65478175 - B4 SINE B4 -209 83 32 5 875 491 276 103 41 chr15 38016838 38017311 -65477663 + L1M5 LINE L1 3499 4020 -2126 5 875 1287 68 85 0 chr15 38017504 38017520 -65477454 - B2_Mm1a SINE B2 -1 192 177 5 875 270 0 0 0 chr15 38017520 38017550 -65477424 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 5 875 1287 68 85 0 chr15 38017550 38017709 -65477265 - B2_Mm1a SINE B2 -17 176 3 5 875 180 0 0 0 chr15 38017709 38017729 -65477245 + (T)n Simple_repeat Simple_repeat 1 20 0 5 875 697 268 65 28 chr15 38017729 38017944 -65477030 - B4 SINE B4 -69 223 1 5 875 551 267 7 62 chr15 38018034 38018178 -65476796 + B1F SINE Alu 8 143 -6 5 875 1153 88 0 0 chr15 38018226 38018373 -65476601 + B1_Mus1 SINE Alu 2 148 0 5 875 520 195 79 9 chr15 38018384 38018498 -65476476 + B1_Mur1 SINE Alu 21 142 -7 5 875 239 255 83 117 chr15 38018391 38018511 -65476463 + B4A SINE B4 118 233 -59 6 875 651 244 0 16 chr15 38018690 38018811 -65476163 + B1F2 SINE Alu 18 136 -13 6 875 522 0 0 0 chr15 38018819 38018877 -65476097 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 875 334 313 139 7 chr15 38018898 38019049 -65475925 + L1M5 LINE L1 4030 4200 -1946 5 875 229 282 129 61 chr15 38019429 38019561 -65475413 + ID_B1 SINE B4 82 222 -2 6 875 683 151 0 0 chr15 38019651 38019757 -65475217 + RMER19B LTR ERVK 1 106 -796 6 875 405 230 29 20 chr15 38019768 38019870 -65475104 + RMER19B LTR ERVK 496 598 -304 6 875 411 193 0 0 chr15 38019876 38019959 -65475015 + (CCTG)n Simple_repeat Simple_repeat 3 85 0 6 875 1340 152 160 18 chr15 38019960 38020235 -65474739 + RMER19B LTR ERVK 583 896 -6 6 875 5748 153 52 158 chr15 38020299 38020508 -65474466 - L1_Mur2 LINE L1 -684 5193 4997 6 875 872 155 14 14 chr15 38020508 38020652 -65474322 - B1_Mur4 SINE Alu -6 144 1 6 875 5748 153 52 158 chr15 38020652 38021175 -65473799 - L1_Mur2 LINE L1 -881 4996 4450 6 875 1082 108 32 21 chr15 38021175 38021216 -65473758 - B2_Mm2 SINE B2 -3 192 153 6 875 994 66 44 7 chr15 38021216 38021353 -65473621 + B1_Mus2 SINE Alu 2 143 -4 6 875 1082 108 32 21 chr15 38021353 38021501 -65473473 - B2_Mm2 SINE B2 -43 152 2 7 875 5748 153 52 158 chr15 38021501 38022196 -65472778 - L1_Mur2 LINE L1 -1428 4449 3746 6 875 765 150 20 2 chr15 38022417 38022557 -65472417 - B1_Mus2 SINE Alu -5 143 1 7 875 366 292 45 83 chr15 38022418 38022575 -65472399 - B4 SINE B4 -72 220 70 7 875 253 279 25 64 chr15 38022450 38022607 -65472367 - ORR1B1-int LTR MaLR -755 754 604 7 875 201 299 88 15 chr15 38022791 38022859 -65472115 - MIR3 SINE MIR -34 174 102 7 875 423 68 0 0 chr15 38023215 38023274 -65471700 + (T)n Simple_repeat Simple_repeat 1 59 0 7 875 414 0 0 0 chr15 38023387 38023433 -65471541 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 875 228 194 14 151 chr15 38023437 38023510 -65471464 - B3A SINE B2 -54 144 82 7 875 659 256 136 0 chr15 38023518 38023709 -65471265 - B4A SINE B4 -59 233 17 7 875 1607 37 21 0 chr15 38023709 38023898 -65471076 + B2_Mm1a SINE B2 1 193 0 7 875 225 287 128 17 chr15 38024052 38024169 -65470805 - L2a LINE L2 -3 3423 3294 8 875 258 32 0 0 chr15 38024713 38024744 -65470230 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 875 638 303 48 0 chr15 38025216 38025404 -65469570 + B3A SINE B2 2 198 0 8 875 334 355 153 0 chr15 38026053 38026281 -65468693 - MIRc SINE MIR 0 268 6 8 875 550 248 77 0 chr15 38026641 38026758 -65468216 + ID_B1 SINE B4 91 216 -8 8 875 650 75 0 11 chr15 38026766 38026860 -65468114 + (GGAA)n Simple_repeat Simple_repeat 3 95 0 8 875 259 286 77 70 chr15 38026910 38027053 -65467921 - MIR SINE MIR -94 168 25 8 875 3103 157 10 18 chr15 38027220 38027732 -65467242 + RMER15 LTR ERVL 1 508 -67 8 875 472 246 158 8 chr15 38028278 38028405 -65466569 - B1F2 SINE Alu -1 148 3 8 875 738 251 103 182 chr15 38028561 38028713 -65466261 - MTE2a LTR MaLR 0 379 217 8 875 739 193 29 0 chr15 38028713 38028853 -65466121 + B1_Mus2 SINE Alu 2 145 -2 9 875 738 251 103 182 chr15 38028853 38028877 -65466097 - MTE2a LTR MaLR -163 216 216 9 875 1576 33 38 0 chr15 38028877 38029061 -65465913 + B2_Mm1t SINE B2 2 192 -1 9 875 738 268 93 158 chr15 38029061 38029315 -65465659 - MTE2a LTR MaLR -144 275 3 8 875 677 273 126 81 chr15 38029909 38030370 -65464604 + RLTR12B LTR ERVK 2 508 -20 9 875 1201 68 0 0 chr15 38030518 38030666 -65464308 + B1_Mus1 SINE Alu 1 148 0 9 875 954 239 140 19 chr15 38030680 38030944 -65464030 - MTE2b LTR MaLR -54 325 30 9 875 380 291 203 49 chr15 38031174 38031548 -65463426 - RMER21B LTR ERV1 -113 834 321 9 875 317 213 53 13 chr15 38031816 38031892 -65463082 + ID4_ SINE ID 2 80 -3 9 875 23 0 0 0 chr15 38031944 38031967 -65463007 + AT_rich Low_complexity Low_complexity 1 23 0 9 875 612 294 6 6 chr15 38032006 38032170 -65462804 + RSINE1 SINE B4 2 165 0 9 875 1528 178 77 41 chr15 38032492 38032832 -65462142 - ORR1D1 LTR MaLR -22 352 1 1 875 240 315 12 3 chr15 38033267 38033347 -65461627 + ID4 SINE ID 3 80 -72 1 875 228 257 27 13 chr15 38033703 38033778 -65461196 + L1MEe LINE L1 149 224 -4630 1 875 326 313 8 57 chr15 38034102 38034224 -65460750 + PB1D10 SINE Alu 2 117 0 1 875 396 0 0 0 chr15 38034411 38034455 -65460519 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 875 259 272 24 47 chr15 38034769 38034854 -65460120 - ID4 SINE ID 0 83 1 1 875 547 209 276 11 chr15 38036284 38036458 -65458516 + ID_B1 SINE B4 2 221 -3 1 875 430 78 0 45 chr15 38036786 38036853 -65458121 + RLTR26 LTR ERVK 1 64 -578 1 875 2649 104 66 11 chr15 38036854 38037309 -65457665 - RMER17B LTR ERVK -257 701 222 1 875 25 51 0 0 chr15 38037309 38037348 -65457626 + AT_rich Low_complexity Low_complexity 1 39 0 1 875 372 43 0 0 chr15 38037348 38037394 -65457580 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 875 795 208 6 167 chr15 38037394 38037445 -65457529 - RMER17B LTR ERVK -692 266 232 1 875 252 97 32 16 chr15 38037445 38037508 -65457466 + (TA)n Simple_repeat Simple_repeat 1 64 0 1 875 1442 150 4 38 chr15 38037508 38037773 -65457201 - RMER17B LTR ERVK -651 255 1 1 875 358 267 73 24 chr15 38037773 38037863 -65457111 - B1F SINE Alu -48 101 6 1 875 1234 34 0 0 chr15 38038020 38038167 -65456807 + B1_Mus2 SINE Alu 1 147 0 1 875 228 306 0 100 chr15 38038585 38038641 -65456333 + ID4_ SINE ID 11 61 -22 1 875 1330 229 138 9 chr15 38038641 38038967 -65456007 - ORR1D2 LTR MaLR 0 370 3 1 875 228 306 0 100 chr15 38038967 38038990 -65455984 + ID4_ SINE ID 62 82 -1 1 875 2475 122 29 5 chr15 38039131 38039511 -65455463 + MTC LTR MaLR 2 390 -31 1 875 826 307 93 69 chr15 38039639 38040137 -65454837 - RLTR26 LTR ERVK -65 562 4 1 875 268 268 0 14 chr15 38040204 38040276 -65454698 + ID4_ SINE ID 2 72 -11 1 875 433 248 59 0 chr15 38040532 38040633 -65454341 - PB1D10 SINE Alu -5 112 6 1 875 237 240 25 51 chr15 38040577 38040656 -65454318 + YREP_Mm Unknown Unknown 253 329 -1483 1 875 845 176 145 65 chr15 38040716 38040916 -65454058 - B3 SINE B2 0 216 1 1 875 367 238 12 36 chr15 38041031 38041114 -65453860 - PB1 SINE Alu 0 127 47 1 875 387 0 0 0 chr15 38041120 38041163 -65453811 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 875 1291 34 0 0 chr15 38041179 38041325 -65453649 - B1_Mm SINE Alu 0 147 2 1 875 1334 83 11 16 chr15 38041678 38041862 -65453112 + B2_Mm1t SINE B2 2 184 -9 1 875 315 157 20 0 chr15 38041888 38041939 -65453035 + PB1D10 SINE Alu 1 52 -65 1 875 297 197 43 43 chr15 38041939 38041957 -65453017 + ID_B1 SINE B4 82 150 -74 1 875 195 42 0 0 chr15 38042048 38042072 -65452902 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 875 1142 96 0 0 chr15 38042089 38042235 -65452739 + B1_Mus1 SINE Alu 3 148 0 1 875 757 183 231 0 chr15 38042412 38042581 -65452393 - B3 SINE B2 -7 209 2 1 875 309 318 156 20 chr15 38042692 38042891 -65452083 + Charlie24 DNA MER1_type 193 418 -2032 1 875 404 261 32 11 chr15 38042961 38043054 -65451920 + B1F SINE Alu 49 143 -6 1 875 537 252 0 48 chr15 38043071 38043217 -65451757 + B3 SINE B2 57 195 -21 1 875 225 69 0 94 chr15 38043235 38043299 -65451675 + T-rich Low_complexity Low_complexity 3 60 0 1 875 195 42 0 0 chr15 38043309 38043333 -65451641 + (T)n Simple_repeat Simple_repeat 1 24 0 1 875 1237 34 0 7 chr15 38043333 38043480 -65451494 - B1_Mm SINE Alu 0 147 2 1 875 1039 101 0 0 chr15 38043480 38043618 -65451356 - B1_Mur4 SINE Alu -12 138 1 1 875 571 221 86 95 chr15 38043716 38043926 -65451048 + B4A SINE B4 85 292 0 1 875 249 33 0 0 chr15 38043952 38043982 -65450992 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 1 875 1516 62 0 10 chr15 38044122 38044318 -65450656 - B2_Mm2 SINE B2 0 195 2 1 875 504 325 196 55 chr15 38044565 38045057 -65449917 + Charlie24 DNA MER1_type 1515 2097 -353 1 875 360 262 46 9 chr15 38045057 38045165 -65449809 - PB1D7 SINE Alu -8 112 1 1 875 504 325 196 55 chr15 38045165 38045332 -65449642 + Charlie24 DNA MER1_type 2098 2267 -183 1 875 293 271 80 3 chr15 38045337 38045440 -65449534 + AluG_3 SINE Alu 9 214 -97 1 875 236 130 22 0 chr15 38045440 38045486 -65449488 + GA-rich Low_complexity Low_complexity 3 49 0 1 875 326 307 94 8 chr15 38045496 38045624 -65449350 + Charlie24 DNA MER1_type 2301 2439 -11 1 875 958 136 14 0 chr15 38045912 38046059 -65448915 - B1_Mur4 SINE Alu -1 149 1 1 875 215 293 60 24 chr15 38046322 38046406 -65448568 - MamSINE1 SINE tRNA -190 100 14 1 875 2004 131 27 83 chr15 38046680 38047055 -65447919 - ORR1B1 LTR MaLR 0 394 41 1 875 2859 136 39 4 chr15 38047303 38047791 -65447183 - RLTR28 LTR ERVL 0 524 20 1 875 567 214 0 0 chr15 38048131 38048262 -65446712 + (CA)n Simple_repeat Simple_repeat 1 131 0 1 875 402 21 0 0 chr15 38048262 38048309 -65446665 + (GGGA)n Simple_repeat Simple_repeat 2 48 0 1 875 597 303 18 31 chr15 38048386 38048611 -65446363 - ID_B1 SINE B4 -2 222 1 1 875 468 184 69 0 chr15 38049128 38049215 -65445759 - PB1D10 SINE Alu -24 93 1 1 875 268 363 37 79 chr15 38049300 38049951 -65445023 - L1M3e LINE L1 -5289 1741 1132 1 875 342 277 24 0 chr15 38050077 38050160 -65444814 + MLT1J LTR MaLR 83 167 -345 1 875 274 314 33 67 chr15 38050274 38050424 -65444550 + B4 SINE B4 2 146 -146 1 875 1131 281 100 62 chr15 38050715 38051352 -65443622 + L1MD1 LINE L1 132 876 -5757 1 875 338 282 14 50 chr15 38051373 38051527 -65443447 + ID2 SINE ID 5 147 -5 1 875 3153 83 5 0 chr15 38051737 38052156 -65442818 - BGLII LTR ERVK 0 421 1 1 875 686 185 88 7 chr15 38052252 38052388 -65442586 - B1_Mur2 SINE Alu -1 148 2 1 875 1391 187 179 15 chr15 38052442 38052778 -65442196 - MTD LTR MaLR -16 403 13 1 875 257 219 54 14 chr15 38052780 38052854 -65442120 + L1MD1 LINE L1 3802 3878 -2659 1 875 231 36 0 0 chr15 38052862 38052890 -65442084 + (TGG)n Simple_repeat Simple_repeat 1 28 0 1 875 747 231 0 0 chr15 38052890 38053033 -65441941 - B1_Mur4 SINE Alu -7 143 1 1 875 2336 96 9 3 chr15 38053234 38053559 -65441415 + ORR1A2 LTR MaLR 1 327 0 1 875 525 32 0 0 chr15 38053734 38053797 -65441177 + (TTTC)n Simple_repeat Simple_repeat 2 64 0 1 875 1269 103 11 0 chr15 38053831 38054006 -65440968 - B2_Mm1t SINE B2 -15 178 2 1 875 611 245 88 0 chr15 38054018 38054177 -65440797 - LTR55 LTR ERV -375 173 1 1 875 262 286 35 9 chr15 38054178 38054291 -65440683 + L1MD1 LINE L1 4050 4165 -2372 1 875 324 329 13 73 chr15 38054300 38054451 -65440523 - RMER15 LTR ERVL -12 563 422 1 875 329 276 29 48 chr15 38054822 38054925 -65440049 + PB1 SINE Alu 25 125 -2 1 875 527 305 50 28 chr15 38054965 38055136 -65439838 + ID_B1 SINE B4 42 219 -5 1 875 222 62 0 0 chr15 38055136 38055168 -65439806 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1 875 588 224 42 18 chr15 38055208 38055376 -65439598 + L1MD1 LINE L1 4477 4648 -1889 1 875 619 243 91 27 chr15 38055438 38055624 -65439350 + B3A SINE B2 1 198 0 1 875 5409 189 87 10 chr15 38055670 38056564 -65438410 - Lx2B LINE L1 -4 6996 6022 1 875 1142 30 22 0 chr15 38056564 38056699 -65438275 - B1_Mus1 SINE Alu -6 142 5 1 875 5367 146 196 2 chr15 38056699 38057290 -65437684 - Lx2B LINE L1 -979 6021 5316 1 875 533 249 102 9 chr15 38057374 38057589 -65437385 + L1MD1 LINE L1 4775 5009 -1528 1 875 3666 159 132 64 chr15 38057822 38058655 -65436319 - RMER19B LTR ERVK -12 890 1 1 875 405 180 100 0 chr15 38058782 38058882 -65436092 - MTEa LTR MaLR -1 378 269 1 875 234 0 0 0 chr15 38058885 38058911 -65436063 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 875 434 226 129 70 chr15 38058927 38059113 -65435861 + B3A SINE B2 2 198 0 1 875 795 284 109 59 chr15 38059123 38059599 -65435375 + L1MD1 LINE L1 5689 6188 -445 1 875 287 143 0 0 chr15 38059614 38059663 -65435311 - B1_Mur1 SINE Alu -1 148 100 1 875 286 257 0 26 chr15 38059663 38059739 -65435235 + RMER10A LTR ERVL 1 74 -368 1 875 471 284 66 39 chr15 38059752 38060008 -65434966 + RMER10A LTR ERVL 164 426 -16 1 875 510 144 20 10 chr15 38060013 38060111 -65434863 - B1_Mur4 SINE Alu -45 105 7 1 875 571 256 69 17 chr15 38060306 38060481 -65434493 + L1MD1 LINE L1 6450 6633 0 1 875 332 345 52 88 chr15 38060540 38060791 -65434183 - B4A SINE B4 -8 284 43 1 875 500 261 31 50 chr15 38060911 38061072 -65433902 + RSINE1 SINE B4 2 159 -6 1 875 270 0 0 0 chr15 38061079 38061109 -65433865 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 875 236 278 0 0 chr15 38061167 38061221 -65433753 + tRNA-Ala-GCY_ tRNA tRNA 3 56 -19 1 875 2380 173 35 12 chr15 38061426 38061941 -65433033 - RCHARR1 DNA MER1_type 0 974 448 1 875 633 309 84 15 chr15 38062027 38062300 -65432674 - RCHARR1 DNA MER1_type -678 296 5 1 875 484 342 30 58 chr15 38062303 38062632 -65432342 + L4 LINE RTE 503 822 -1207 1 875 538 283 57 16 chr15 38062651 38062845 -65432129 - RMER15 LTR ERVL -14 561 360 1 875 873 191 108 5 chr15 38063004 38063038 -65431936 - B3 SINE B2 0 216 183 1 875 294 29 0 0 chr15 38063038 38063073 -65431901 + (TATG)n Simple_repeat Simple_repeat 4 38 0 1 875 873 191 108 5 chr15 38063073 38063233 -65431741 - B3 SINE B2 -34 182 3 1 875 1535 152 50 112 chr15 38063442 38063879 -65431095 - RMER17C LTR ERVK 0 410 1 1 875 335 369 69 11 chr15 38064158 38064347 -65430627 - MamRep605 Unknown Unknown -268 608 409 1 875 29 0 0 0 chr15 38065031 38065060 -65429914 + AT_rich Low_complexity Low_complexity 1 29 0 1 875 808 161 0 34 chr15 38065091 38065239 -65429735 - B1_Mus2 SINE Alu 0 147 5 1 875 502 220 36 9 chr15 38065244 38065354 -65429620 - PB1D9 SINE Alu -2 118 6 1 875 347 314 16 25 chr15 38066082 38066203 -65428771 + RSINE1 SINE B4 3 122 -43 1 875 966 142 14 0 chr15 38066818 38066966 -65428008 + B1_Mur4 SINE Alu 1 150 0 1 875 815 196 117 18 chr15 38066982 38067205 -65427769 + RMER4B LTR ERVK 1 245 -340 1 875 189 0 0 0 chr15 38067205 38067226 -65427748 + (CAG)n Simple_repeat Simple_repeat 2 22 0 1 875 422 229 227 31 chr15 38067299 38067493 -65427481 + RMER4B LTR ERVK 343 574 -11 1 875 1339 85 23 0 chr15 38067518 38067695 -65427279 + B2_Mm2 SINE B2 2 182 -13 1 875 220 105 0 0 chr15 38067751 38067789 -65427185 + B2_Mm1t SINE B2 65 102 -91 1 875 22 0 0 0 chr15 38067811 38067833 -65427141 + AT_rich Low_complexity Low_complexity 1 22 0 2 875 797 227 66 20 chr15 38067854 38068027 -65426947 + MurERV4-int LTR ERVK 1 185 -5075 2 875 1188 96 0 0 chr15 38068027 38068204 -65426770 + (TTC)n Simple_repeat Simple_repeat 1 177 0 2 875 797 227 66 20 chr15 38068204 38068228 -65426746 + MurERV4-int LTR ERVK 186 207 -5053 2 875 6275 213 38 41 chr15 38068225 38070157 -65424817 + MurERV4-int LTR ERVK 179 2020 -3240 2 875 396 0 0 0 chr15 38070157 38070201 -65424773 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 875 306 0 0 0 chr15 38070201 38070234 -65424740 + (GA)n Simple_repeat Simple_repeat 1 34 0 2 875 3022 213 85 40 chr15 38070234 38070374 -65424600 + MurERV4-int LTR ERVK 2021 2174 -3086 2 875 8566 148 29 62 chr15 38070365 38071825 -65423149 + MurERV4-int LTR ERVK 3727 5187 -73 2 875 1222 54 0 0 chr15 38071825 38071972 -65423002 + B1_Mus2 SINE Alu 1 147 0 2 875 8566 148 29 62 chr15 38071972 38072054 -65422920 + MurERV4-int LTR ERVK 5188 5224 -36 2 875 1177 49 0 0 chr15 38072054 38072196 -65422778 - B1_Mm SINE Alu -5 142 1 2 875 8566 148 29 62 chr15 38072196 38072238 -65422736 + MurERV4-int LTR ERVK 5225 5260 0 2 875 1266 198 161 41 chr15 38072238 38072655 -65422319 + RMER4B LTR ERVK 1 467 -118 2 875 435 170 55 71 chr15 38072623 38072749 -65422225 + RMER4B LTR ERVK 356 574 -11 2 875 213 163 0 58 chr15 38072750 38072802 -65422172 + A-rich Low_complexity Low_complexity 2 50 0 2 875 625 313 5 30 chr15 38073065 38073164 -65421810 + MLT2B1 LTR ERVL 15 113 -407 2 875 2466 77 3 58 chr15 38073164 38073510 -65421464 - ORR1A2 LTR MaLR 0 327 1 2 875 625 313 5 30 chr15 38073510 38073611 -65421363 + MLT2B1 LTR ERVL 114 210 -310 2 875 250 298 102 26 chr15 38073629 38073831 -65421143 + MLT2B1 LTR ERVL 351 557 -5 2 875 255 356 67 0 chr15 38073859 38073963 -65421011 - MIR SINE MIR -45 217 107 2 875 24 0 0 0 chr15 38074949 38074973 -65420001 + AT_rich Low_complexity Low_complexity 1 24 0 2 875 351 238 12 12 chr15 38074992 38075073 -65419901 + B4 SINE B4 5 85 -207 2 875 349 263 13 0 chr15 38075087 38075163 -65419811 + RSINE1 SINE B4 30 106 -59 2 875 1910 116 9 59 chr15 38075185 38075524 -65419450 - RLTRETN_Mm LTR ERVK 0 322 1 2 875 512 77 0 13 chr15 38075531 38075610 -65419364 + (CA)n Simple_repeat Simple_repeat 1 78 0 2 875 384 207 12 12 chr15 38075644 38075727 -65419247 + PB1D9 SINE Alu 36 118 -2 2 875 185 226 0 19 chr15 38076482 38076536 -65418438 + CT-rich Low_complexity Low_complexity 1 53 0 2 875 492 62 0 0 chr15 38076526 38076590 -65418384 + (TCC)n Simple_repeat Simple_repeat 3 66 0 2 875 793 242 90 85 chr15 38076592 38076958 -65418016 - RLTR9A LTR ERVK 0 368 1 2 875 306 235 86 57 chr15 38077056 38077201 -65417773 - RMER16-int LTR ERVK -62 5344 5241 2 875 7002 83 23 29 chr15 38077230 38078237 -65416737 + L1_Mus3 LINE L1 5636 6636 -2 2 875 13737 125 55 35 chr15 38078808 38080833 -65414141 - RMER16-int LTR ERVK -1540 3866 1949 2 875 1233 48 0 0 chr15 38080833 38080978 -65413996 + B1_Mus2 SINE Alu 2 146 -1 2 875 13737 121 50 39 chr15 38080978 38081392 -65413582 - RMER16-int LTR ERVK -3458 1948 1566 2 875 399 170 240 79 chr15 38081557 38081707 -65413267 - RMER16-int LTR ERVK -4859 2547 2380 2 875 4644 140 32 13 chr15 38081916 38082628 -65412346 - RMER16-int LTR ERVK -3838 1568 856 2 875 288 0 0 0 chr15 38082628 38082660 -65412314 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 2 875 4644 167 110 36 chr15 38082660 38083102 -65411872 - RMER16-int LTR ERVK -5922 1484 787 2 875 21 0 0 0 chr15 38083197 38083218 -65411756 + AT_rich Low_complexity Low_complexity 1 21 0 2 875 441 0 0 0 chr15 38083509 38083558 -65411416 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 875 603 234 107 39 chr15 38083577 38083875 -65411099 - RLTR9A LTR ERVK -57 311 2 2 875 846 116 0 0 chr15 38083880 38084009 -65410965 + (TTC)n Simple_repeat Simple_repeat 1 129 0 2 875 720 247 18 29 chr15 38084039 38084210 -65410764 - B3A SINE B2 -29 169 1 2 875 1981 137 152 6 chr15 38085000 38085330 -65409644 + ORR1C1 LTR MaLR 1 378 0 2 875 458 266 0 0 chr15 38085691 38085815 -65409159 + MLT1C LTR MaLR 55 178 -289 2 875 1113 63 7 0 chr15 38085820 38085962 -65409012 + B1_Mus2 SINE Alu 2 144 -3 2 875 231 322 102 51 chr15 38086037 38086281 -65408693 + MLT1C LTR MaLR 165 422 -45 2 875 484 168 126 0 chr15 38086281 38086376 -65408598 - PB1D10 SINE Alu -9 108 2 2 875 1812 181 80 10 chr15 38086400 38086786 -65408188 + RLTR25B LTR ERVK 159 571 -457 2 875 834 238 99 45 chr15 38086810 38087122 -65407852 + RMER5 LTR ERV1 202 530 -4 2 875 760 209 93 0 chr15 38087584 38087756 -65407218 - B3 SINE B2 -1 215 28 2 875 290 347 0 39 chr15 38087851 38087980 -65406994 + MIR SINE MIR 12 135 -127 2 875 506 31 0 0 chr15 38088040 38088105 -65406869 - B1_Mus1 SINE Alu -83 65 1 2 875 229 221 92 122 chr15 38088105 38088138 -65406836 - MT2B LTR ERVL -380 221 127 2 875 340 252 268 0 chr15 38088231 38088358 -65406616 + RSINE1 SINE B4 3 163 -2 2 875 236 253 22 22 chr15 38088525 38088614 -65406360 + MLT1B LTR MaLR 257 345 -45 2 875 297 229 43 0 chr15 38088751 38088821 -65406153 - ID4_ SINE ID -10 73 1 2 875 237 33 0 0 chr15 38089664 38089694 -65405280 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 875 374 0 22 0 chr15 38089694 38089739 -65405235 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 875 259 208 133 40 chr15 38090169 38090319 -65404655 - L1M5 LINE L1 -742 5431 5268 2 875 1081 284 59 24 chr15 38090560 38090899 -65404075 - Lx8 LINE L1 -159 7314 6964 2 875 304 233 84 37 chr15 38091245 38091352 -65403622 + RLTR14 LTR ERV1 271 382 0 2 875 396 0 0 0 chr15 38091376 38091420 -65403554 + (GA)n Simple_repeat Simple_repeat 1 44 0 2 875 551 40 14 0 chr15 38091541 38091615 -65403359 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 2 875 1086 57 28 11 chr15 38091627 38091804 -65403170 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 2 875 494 250 33 0 chr15 38092206 38092326 -65402648 - Lx8 LINE L1 -528 6945 6822 2 875 488 157 219 16 chr15 38092513 38092636 -65402338 + B1F1 SINE Alu 1 148 -1 2 875 1301 98 49 0 chr15 38094374 38094558 -65400416 + B2_Mm2 SINE B2 3 195 0 2 875 189 0 0 0 chr15 38094689 38094710 -65400264 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 2 875 459 0 0 0 chr15 38094899 38094950 -65400024 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 2 875 1045 65 23 17 chr15 38095024 38095197 -65399777 + (TCTA)n Simple_repeat Simple_repeat 1 174 0 2 875 221 320 40 0 chr15 38095269 38095344 -65399630 - B1F SINE Alu -53 96 19 2 875 384 272 26 9 chr15 38096648 38096763 -65398211 + PB1D9 SINE Alu 2 118 -2 2 875 330 45 0 0 chr15 38096765 38096809 -65398165 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 2 875 456 306 117 0 chr15 38096813 38097009 -65397965 + ID_B1 SINE B4 2 220 -4 2 875 198 0 0 0 chr15 38097025 38097047 -65397927 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 2 875 359 278 88 22 chr15 38097266 38097402 -65397572 - L1MD3 LINE L1 -325 7670 7526 2 875 284 155 175 58 chr15 38097866 38097969 -65397005 - B3 SINE B2 -12 204 90 2 875 470 273 7 27 chr15 38098045 38098192 -65396782 - B3 SINE B2 0 216 73 2 875 554 217 30 15 chr15 38098254 38098385 -65396589 - B1F1 SINE Alu -2 147 15 2 875 211 339 0 0 chr15 38098416 38098481 -65396493 - MER5A DNA MER1_type -49 140 76 2 875 401 287 30 0 chr15 38098758 38098859 -65396115 - PB1D10 SINE Alu 0 117 14 2 875 243 0 0 0 chr15 38098868 38098895 -65396079 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 875 492 305 135 49 chr15 38098895 38099222 -65395752 - MTEa LTR MaLR -20 359 5 2 875 1323 318 126 40 chr15 38099226 38099478 -65395496 - MTEa-int LTR MaLR -8 1572 1291 2 875 180 0 0 0 chr15 38099478 38099498 -65395476 + (GGAAA)n Simple_repeat Simple_repeat 2 21 0 2 875 1323 318 126 40 chr15 38099498 38100053 -65394921 - MTEa-int LTR MaLR -290 1290 696 2 875 513 342 76 99 chr15 38100248 38100631 -65394343 - MTEa-int LTR MaLR -1158 422 49 2 875 191 32 65 0 chr15 38100884 38100915 -65394059 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 2 875 516 32 0 0 chr15 38100941 38101003 -65393971 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 875 1424 81 5 0 chr15 38101103 38101289 -65393685 + B2_Mm1a SINE B2 2 188 -5 2 875 875 106 29 6 chr15 38102163 38102510 -65392464 + (CA)n Simple_repeat Simple_repeat 1 355 0 2 875 445 236 32 103 chr15 38102677 38102833 -65392141 + B4 SINE B4 79 223 -69 2 875 841 152 0 0 chr15 38102698 38102836 -65392138 + B1_Mur1 SINE Alu 12 149 0 2 875 709 210 29 204 chr15 38102959 38103204 -65391770 - B3 SINE B2 -10 206 5 2 875 333 0 0 0 chr15 38104625 38104662 -65390312 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 875 307 253 46 0 chr15 38104847 38104934 -65390040 - PB1D7 SINE Alu -8 112 22 2 875 252 0 0 0 chr15 38105224 38105252 -65389722 + (A)n Simple_repeat Simple_repeat 1 28 0 2 875 237 323 158 0 chr15 38105310 38105437 -65389537 - L1M5 LINE L1 -437 5757 5611 2 875 405 0 0 0 chr15 38105798 38105843 -65389131 + (TC)n Simple_repeat Simple_repeat 1 45 0 2 875 217 308 36 27 chr15 38106426 38106536 -65388438 - MIRb SINE MIR -32 236 126 2 875 378 0 0 0 chr15 38106731 38106773 -65388201 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 875 375 309 76 42 chr15 38106992 38107305 -65387669 - RMER20B LTR ERVK -120 507 162 2 875 207 139 0 0 chr15 38107441 38107477 -65387497 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 875 312 27 0 0 chr15 38107808 38107845 -65387129 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 875 524 205 24 32 chr15 38107847 38107973 -65387001 - ID_B1 SINE B4 -12 212 88 2 875 1270 167 9 26 chr15 38108500 38108728 -65386246 + URR1B DNA MER1_type 1 224 -1 2 875 312 242 29 48 chr15 38109843 38109947 -65385027 + MER57A-int LTR ERV1 5798 5899 -288 2 875 246 388 45 37 chr15 38110257 38110391 -65384583 - ID_B1 SINE B4 -4 220 86 2 875 553 165 156 16 chr15 38110962 38111173 -65383801 + ORR1C2 LTR MaLR 5 273 -111 2 875 375 23 0 0 chr15 38111175 38111219 -65383755 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2 875 856 45 0 0 chr15 38111219 38111329 -65383645 - B1_Mm SINE Alu -10 137 28 2 875 243 203 68 0 chr15 38111327 38111386 -65383588 + ORR1C2 LTR MaLR 310 372 -6 2 875 2857 140 34 34 chr15 38111882 38112443 -65382531 + RLTR31_Mm LTR ERVK 1 561 0 2 875 367 256 47 0 chr15 38112444 38112543 -65382431 + B1F SINE Alu 14 117 -32 2 875 289 235 44 0 chr15 38112553 38112621 -65382353 + MLT1F2 LTR MaLR 68 138 -422 2 875 1045 254 60 93 chr15 38113132 38113604 -65381370 + MT2B LTR ERVL 18 599 -2 2 875 278 324 200 0 chr15 38114265 38114410 -65380564 + MLT1F2 LTR MaLR 332 505 0 2 875 524 249 63 46 chr15 38114413 38114573 -65380401 + ID_B1 SINE B4 59 221 -3 2 875 296 167 0 29 chr15 38114623 38114691 -65380283 + GA-rich Low_complexity Low_complexity 1 66 0 2 875 24 53 0 0 chr15 38115532 38115570 -65379404 + AT_rich Low_complexity Low_complexity 1 38 0 2 875 354 174 58 0 chr15 38115570 38115639 -65379335 - B1_Mur1 SINE Alu -43 106 34 3 875 419 286 17 0 chr15 38115693 38115812 -65379162 - B3A SINE B2 -77 121 1 3 875 332 247 31 51 chr15 38115891 38115989 -65378985 + PB1D10 SINE Alu 20 115 -2 3 875 1026 110 0 0 chr15 38116081 38116236 -65378738 + (GGGA)n Simple_repeat Simple_repeat 2 156 0 3 875 265 200 20 0 chr15 38116678 38116728 -65378246 + LTR85b LTR Gypsy? 729 779 -5 3 875 484 229 245 20 chr15 38116918 38117114 -65377860 + RLTR28B LTR ERVL 108 347 -134 3 875 225 219 0 0 chr15 38117210 38117251 -65377723 + B1F SINE Alu 91 131 -18 3 875 1311 253 87 89 chr15 38117295 38117755 -65377219 - RMER1B Other Other -596 470 12 3 875 2256 151 23 20 chr15 38118544 38118935 -65376039 - ORR1B1 LTR MaLR -2 392 1 3 875 1316 268 29 14 chr15 38119045 38119393 -65375581 + ORR1E LTR MaLR 7 359 0 3 875 291 273 26 0 chr15 38119643 38119720 -65375254 - ID4_ SINE ID 0 83 5 3 875 417 278 68 20 chr15 38119849 38119996 -65374978 - MER21B LTR ERV1 -150 713 560 3 875 381 266 220 16 chr15 38120119 38120330 -65374644 + B4A SINE B4 14 286 -6 3 875 980 70 78 0 chr15 38120358 38120487 -65374487 + B1_Mus1 SINE Alu 3 141 -7 3 875 180 0 0 0 chr15 38120487 38120507 -65374467 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 875 293 0 27 0 chr15 38120509 38120546 -65374428 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 875 690 213 78 12 chr15 38120558 38120724 -65374250 - MER2 DNA MER2_type -98 247 71 3 875 796 214 0 7 chr15 38120735 38120876 -65374098 - B3 SINE B2 -74 142 3 3 875 855 126 0 8 chr15 38120918 38121046 -65373928 + B1_Mus1 SINE Alu 3 129 -19 3 875 351 203 16 0 chr15 38121108 38121172 -65373802 - MER2 DNA MER2_type -279 66 2 3 875 671 274 90 127 chr15 38121199 38121273 -65373701 + Cheshire DNA MER1_type 2060 2118 -302 3 875 685 205 249 12 chr15 38121273 38121446 -65373528 + B3 SINE B2 3 216 0 3 875 671 274 90 127 chr15 38121446 38121726 -65373248 + Cheshire DNA MER1_type 2119 2401 -19 3 875 286 187 226 21 chr15 38121975 38122068 -65372906 + MTD LTR MaLR 289 400 -19 3 875 829 226 80 0 chr15 38122119 38122318 -65372656 - B3 SINE B2 -1 215 1 3 875 283 333 12 14 chr15 38122586 38122678 -65372296 + MIR SINE MIR 18 107 -155 3 875 352 270 170 28 chr15 38122743 38122884 -65372090 + MER73 LTR ERVL 38 198 -446 3 875 233 250 25 174 chr15 38123048 38123169 -65371805 + MER73 LTR ERVL 469 571 -73 3 875 309 287 21 31 chr15 38123158 38123255 -65371719 + MER73 LTR ERVL 122 217 -427 3 875 1201 61 7 0 chr15 38123333 38123480 -65371494 + B1_Mus1 SINE Alu 1 148 0 3 875 557 214 10 0 chr15 38124240 38124338 -65370636 + URR1B DNA MER1_type 2 100 -125 3 875 279 0 0 0 chr15 38124338 38124369 -65370605 + (TA)n Simple_repeat Simple_repeat 2 32 0 3 875 225 0 0 0 chr15 38124369 38124394 -65370580 + (T)n Simple_repeat Simple_repeat 1 25 0 3 875 1178 68 0 0 chr15 38124394 38124540 -65370434 - B1_Mus2 SINE Alu 0 147 2 3 875 409 155 295 19 chr15 38124611 38124716 -65370258 + B3 SINE B2 81 214 -2 3 875 2228 132 105 14 chr15 38124997 38125358 -65369616 - ORR1B1 LTR MaLR 0 394 1 3 875 922 181 79 0 chr15 38125514 38125691 -65369283 - B3 SINE B2 -1 215 25 3 875 1351 95 26 0 chr15 38125696 38125885 -65369089 - B2_Mm2 SINE B2 0 195 2 3 875 427 178 20 0 chr15 38125913 38126014 -65368960 + (TATATG)n Simple_repeat Simple_repeat 4 106 0 3 875 599 311 26 13 chr15 38126015 38126168 -65368806 - RSINE1 SINE B4 0 165 11 3 875 411 256 111 41 chr15 38126166 38126337 -65368637 - MLT1C LTR MaLR -279 188 6 3 875 224 59 29 0 chr15 38126442 38126476 -65368498 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 875 291 154 19 0 chr15 38126477 38126529 -65368445 + MTD LTR MaLR 20 72 -347 3 875 833 202 0 0 chr15 38126534 38126663 -65368311 + B3 SINE B2 2 130 -86 3 875 964 246 159 10 chr15 38126698 38126994 -65367980 + MTD LTR MaLR 79 418 -1 3 875 702 0 0 0 chr15 38128233 38128311 -65366663 + (GA)n Simple_repeat Simple_repeat 1 78 0 3 875 189 243 24 129 chr15 38129610 38129695 -65365279 + MER5A DNA MER1_type 44 119 -70 3 875 301 289 0 0 chr15 38129696 38129779 -65365195 + G-rich Low_complexity Low_complexity 1 83 0 3 875 286 260 195 0 chr15 38130747 38130824 -65364150 - PB1D7 SINE Alu -28 92 1 3 875 221 283 17 0 chr15 38131075 38131135 -65363839 + CT-rich Low_complexity Low_complexity 2 62 0 3 875 276 316 49 49 chr15 38131453 38131576 -65363398 + B1F SINE Alu 1 123 -26 3 875 228 315 50 78 chr15 38131458 38131599 -65363375 + ID_B1 SINE B4 87 223 -1 3 875 273 29 0 0 chr15 38132190 38132224 -65362750 + (GTTTG)n Simple_repeat Simple_repeat 5 38 0 3 875 1214 42 0 0 chr15 38132224 38132367 -65362607 - B1_Mus2 SINE Alu -4 143 1 3 875 367 376 68 16 chr15 38132607 38132799 -65362175 + MER63A DNA AcHobo 6 207 -3 3 875 623 286 125 40 chr15 38132857 38133105 -65361869 - MLT1B LTR MaLR -16 374 106 3 875 635 194 90 0 chr15 38133592 38133726 -65361248 + B1_Mus2 SINE Alu 1 146 -1 3 875 506 217 41 72 chr15 38133887 38134042 -65360932 + ORR1E LTR MaLR 2 184 -186 3 875 300 193 11 33 chr15 38134639 38134730 -65360244 + T-rich Low_complexity Low_complexity 2 90 0 3 875 257 197 14 116 chr15 38134738 38134807 -65360167 - PB1D10 SINE Alu -12 105 44 3 875 1246 54 0 0 chr15 38134858 38135005 -65359969 + B1_Mus2 SINE Alu 1 147 0 3 875 503 201 7 0 chr15 38135527 38135666 -65359308 + (TG)n Simple_repeat Simple_repeat 1 140 0 3 875 198 229 0 0 chr15 38135709 38135779 -65359195 + (TG)n Simple_repeat Simple_repeat 2 71 0 3 875 514 275 13 98 chr15 38135894 38136047 -65358927 + B1F2 SINE Alu 1 140 -9 3 875 962 240 34 0 chr15 38136069 38136273 -65358701 - B3 SINE B2 -5 211 1 3 875 206 267 0 0 chr15 38136284 38136329 -65358645 + A-rich Low_complexity Low_complexity 2 46 0 3 875 1192 238 104 41 chr15 38136822 38137216 -65357758 + MTD LTR MaLR 1 419 0 3 875 293 330 62 81 chr15 38137467 38137678 -65357296 - L2b LINE L2 -136 3239 3033 3 875 2396 118 86 39 chr15 38138909 38139342 -65355632 + RLTR11B LTR ERVK 1 453 0 3 875 855 252 64 0 chr15 38140207 38140409 -65354565 - ID_B1 SINE B4 -7 217 3 3 875 384 228 0 37 chr15 38140445 38140527 -65354447 - B3 SINE B2 -135 81 3 3 875 708 250 123 15 chr15 38140535 38140730 -65354244 - ID_B1 SINE B4 -7 217 2 3 875 2279 104 0 3 chr15 38141183 38141502 -65353472 - ORR1A3 LTR MaLR -8 318 1 3 875 282 326 93 29 chr15 38141596 38141735 -65353239 + Charlie1a DNA MER1_type 1037 1184 -271 3 875 662 186 0 0 chr15 38141776 38141878 -65353096 - B1_Mur2 SINE Alu -33 116 15 3 109 473 99 0 42 chr15 38141894 38141989 -65352985 + (TAAAA)n Simple_repeat Simple_repeat 5 95 0 3 876 323 342 97 35 chr15 38142029 38142256 -65352718 + B4 SINE B4 52 292 0 3 876 2524 135 18 66 chr15 38142356 38142808 -65352166 - RLTR23 LTR ERV1 0 430 1 3 876 432 0 0 0 chr15 38142838 38142886 -65352088 + (TC)n Simple_repeat Simple_repeat 1 48 0 3 876 460 219 121 36 chr15 38142906 38143072 -65351902 - B3A SINE B2 -17 181 2 3 876 266 218 24 71 chr15 38143632 38143716 -65351258 - ID4 SINE ID -2 81 2 3 876 250 195 129 0 chr15 38143836 38143908 -65351066 - PB1D10 SINE Alu 0 117 38 3 876 620 186 26 65 chr15 38144019 38144174 -65350800 + B1F SINE Alu 1 149 0 3 876 497 322 68 0 chr15 38144474 38144620 -65350354 - B4A SINE B4 -35 257 102 3 876 285 321 0 0 chr15 38144622 38144731 -65350243 + (CAT)n Simple_repeat Simple_repeat 3 111 0 3 876 216 289 60 0 chr15 38144731 38144814 -65350160 - B4A SINE B4 -202 90 3 3 876 751 234 19 25 chr15 38144896 38145058 -65349916 + RSINE1 SINE B4 1 161 -4 3 876 207 162 0 0 chr15 38145079 38145116 -65349858 + (TAA)n Simple_repeat Simple_repeat 3 39 0 3 876 229 318 118 45 chr15 38145592 38145770 -65349204 - LTR88b LTR Gypsy? -627 210 20 3 876 281 312 0 0 chr15 38145730 38145794 -65349180 - B1_Mur3 SINE Alu -84 65 2 3 876 309 264 45 11 chr15 38145794 38145882 -65349092 - 4.5SRNA scRNA scRNA -1 93 3 3 876 227 209 104 0 chr15 38146127 38146194 -65348780 + Charlie4 DNA MER1_type 428 501 -1460 3 876 793 250 34 6 chr15 38146990 38147167 -65347807 + ID_B1 SINE B4 29 210 -14 3 876 774 208 0 32 chr15 38147521 38147675 -65347299 + B1_Mur1 SINE Alu 1 149 0 3 876 698 215 55 101 chr15 38147827 38148044 -65346930 - B3 SINE B2 -6 210 4 3 876 240 274 0 88 chr15 38148595 38148663 -65346311 + ID4 SINE ID 22 83 0 3 876 227 172 104 94 chr15 38150219 38150235 -65344739 + PB1 SINE Alu 24 120 -7 3 876 333 188 175 0 chr15 38150235 38150315 -65344659 + ID_B1 SINE B4 123 216 -8 3 876 236 304 0 0 chr15 38150405 38150474 -65344500 + (TGGA)n Simple_repeat Simple_repeat 3 71 0 3 876 340 283 20 10 chr15 38151026 38151126 -65343848 - CR1_Mam LINE CR1 -584 1620 1520 3 876 633 61 0 0 chr15 38152063 38152145 -65342829 + (TC)n Simple_repeat Simple_repeat 1 82 0 3 876 360 0 0 0 chr15 38152145 38152184 -65342790 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 876 266 148 154 62 chr15 38152491 38152556 -65342418 - PB1D9 SINE Alu -1 119 49 3 876 432 223 123 8 chr15 38152970 38153092 -65341882 + MER5A DNA MER1_type 3 138 -51 3 876 752 241 118 5 chr15 38153221 38153425 -65341549 + B4A SINE B4 1 227 -65 3 876 306 0 0 0 chr15 38155155 38155189 -65339785 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 876 302 271 109 5 chr15 38155279 38155381 -65339593 + B3A SINE B2 4 112 -104 4 876 304 229 198 25 chr15 38155633 38155754 -65339220 - MIR SINE MIR -70 192 51 4 876 189 0 0 0 chr15 38156864 38156885 -65338089 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 4 876 580 144 42 59 chr15 38157013 38157131 -65337843 - PB1D9 SINE Alu -1 119 4 4 876 600 282 40 23 chr15 38157355 38157529 -65337445 + B4A SINE B4 3 179 -113 4 876 917 317 58 24 chr15 38157549 38157927 -65337047 - MT2A LTR ERVL -101 432 42 4 876 1196 75 0 0 chr15 38158486 38158633 -65336341 + B1_Mm SINE Alu 1 147 0 4 876 332 203 87 0 chr15 38159237 38159306 -65335668 + RSINE1 SINE B4 8 82 -83 4 876 336 48 0 0 chr15 38159564 38159606 -65335368 + (GGA)n Simple_repeat Simple_repeat 2 43 0 4 876 1556 233 45 42 chr15 38159902 38160260 -65334714 - MTE2a LTR MaLR 0 379 21 4 876 1949 135 31 15 chr15 38160378 38160702 -65334272 - ORR1A4 LTR MaLR 0 329 1 4 876 2199 143 107 30 chr15 38160703 38161310 -65333664 - ORR1A4-int LTR MaLR -191 1772 959 4 876 647 213 87 44 chr15 38161540 38161746 -65333228 + B3 SINE B2 2 216 0 4 876 189 107 0 0 chr15 38161892 38161920 -65333054 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 4 876 3328 46 5 0 chr15 38162274 38162668 -65332306 - MTA_Mm LTR MaLR 0 396 1 4 876 314 318 25 10 chr15 38163466 38163588 -65331386 + PB1D10 SINE Alu 2 126 -21 4 876 1171 63 0 0 chr15 38163868 38164010 -65330964 + B1_Mus1 SINE Alu 2 143 -5 4 876 1164 271 84 16 chr15 38164291 38164614 -65330360 - MTE2b LTR MaLR -13 366 22 4 876 239 323 10 41 chr15 38164669 38164766 -65330208 - B1_Mus1 SINE Alu -52 96 3 4 876 1696 172 157 63 chr15 38165364 38165446 -65329528 + RMER20A LTR ERVK 21 142 -374 4 876 423 0 0 0 chr15 38165446 38165493 -65329481 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 876 1696 172 157 63 chr15 38165493 38165540 -65329434 + RMER20A LTR ERVK 143 184 -332 4 876 1068 103 0 7 chr15 38165540 38165687 -65329287 + B1_Mus1 SINE Alu 2 147 -1 4 876 1696 172 157 63 chr15 38165687 38166003 -65328971 + RMER20A LTR ERVK 185 509 -7 4 876 472 228 196 37 chr15 38166186 38166400 -65328574 + L1MC3 LINE L1 5714 5961 -1824 4 876 382 304 363 24 chr15 38166457 38166669 -65328305 + B4A SINE B4 1 284 -8 4 876 458 329 57 74 chr15 38166754 38167050 -65327924 + B4A SINE B4 2 292 0 4 876 368 275 93 46 chr15 38168638 38168919 -65326055 + MLT1D LTR MaLR 174 505 0 4 876 2386 190 140 55 chr15 38169448 38170011 -65324963 - RMER19C LTR ERVK 0 611 1 4 876 740 233 13 0 chr15 38170419 38170569 -65324405 - ORR1C2 LTR MaLR 0 384 233 4 876 1093 213 58 20 chr15 38170569 38170840 -65324134 + RLTR11A LTR ERVK 1 242 -286 4 876 1119 59 7 0 chr15 38170887 38171022 -65323952 + B1_Mus2 SINE Alu 1 136 -11 4 876 1088 162 62 10 chr15 38171159 38171352 -65323622 - B3 SINE B2 -11 205 3 4 876 222 37 0 0 chr15 38171538 38171565 -65323409 + (GGTTG)n Simple_repeat Simple_repeat 2 28 0 4 876 766 148 55 27 chr15 38171565 38171702 -65323272 - B1_Mur4 SINE Alu -8 142 2 4 876 495 217 92 15 chr15 38171740 38171871 -65323103 + ID_B1 SINE B4 9 149 -75 4 876 306 50 0 0 chr15 38172667 38172707 -65322267 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 876 216 0 0 0 chr15 38172890 38172914 -65322060 + (T)n Simple_repeat Simple_repeat 1 24 0 4 876 23 0 0 0 chr15 38173056 38173079 -65321895 + AT_rich Low_complexity Low_complexity 1 23 0 4 876 570 79 0 0 chr15 38173589 38173678 -65321296 + (TCC)n Simple_repeat Simple_repeat 1 89 0 4 876 325 0 44 0 chr15 38174040 38174085 -65320889 + (CCCCCA)n Simple_repeat Simple_repeat 2 48 0 4 876 271 288 29 109 chr15 38174715 38174890 -65320084 - MLT1J1 LTR MaLR -283 161 1 4 876 212 364 109 13 chr15 38174900 38175056 -65319918 + L2 LINE L2 1472 1642 -1777 4 876 550 326 82 18 chr15 38175438 38175657 -65319317 + MLT1F2 LTR MaLR 210 442 -118 4 876 519 261 17 0 chr15 38175683 38175798 -65319176 + B3 SINE B2 96 212 -4 4 876 23 0 0 0 chr15 38175802 38175825 -65319149 + AT_rich Low_complexity Low_complexity 1 23 0 4 876 363 236 0 0 chr15 38175825 38175897 -65319077 + ID_B1 SINE B4 146 217 -7 4 876 244 279 72 29 chr15 38176081 38176156 -65318818 + B4A SINE B4 5 82 -210 4 876 185 0 40 0 chr15 38176156 38176181 -65318793 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 876 239 340 59 20 chr15 38176181 38176207 -65318767 + B4 SINE B4 83 109 -183 4 876 216 0 0 0 chr15 38176649 38176673 -65318301 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 4 876 1239 34 0 7 chr15 38176673 38176812 -65318162 - B1_Mus1 SINE Alu -8 140 2 4 876 1618 41 0 10 chr15 38177143 38177338 -65317636 - B2_Mm1a SINE B2 0 193 1 4 876 430 261 0 0 chr15 38178083 38178171 -65316803 - PB1D7 SINE Alu -26 94 7 4 876 1900 177 84 3 chr15 38178229 38178586 -65316388 - ORR1B1 LTR MaLR -8 386 1 4 876 409 322 26 0 chr15 38178696 38178811 -65316163 + B1F SINE Alu 32 149 0 4 876 201 74 0 0 chr15 38178816 38178843 -65316131 + (GGAA)n Simple_repeat Simple_repeat 2 28 0 4 876 236 299 23 79 chr15 38179453 38179612 -65315362 - L2b LINE L2 -179 3208 3062 4 876 583 274 0 0 chr15 38179675 38179810 -65315164 + B1F SINE Alu 1 135 -14 4 876 342 326 177 5 chr15 38180266 38180489 -65314485 - L1M5 LINE L1 -439 5685 5420 4 876 339 25 0 0 chr15 38180492 38180532 -65314442 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 4 876 640 293 32 0 chr15 38180544 38180701 -65314273 - RSINE1 SINE B4 -2 163 2 4 876 314 330 20 20 chr15 38180732 38180834 -65314140 + MTD LTR MaLR 11 112 -307 4 876 506 275 0 28 chr15 38180834 38181072 -65313902 + G-rich Low_complexity Low_complexity 1 231 0 4 876 455 236 122 151 chr15 38181080 38181325 -65313649 + MTD LTR MaLR 106 343 -76 4 876 2064 150 24 27 chr15 38181315 38181685 -65313289 + ORR1B1 LTR MaLR 26 394 0 4 876 446 132 53 0 chr15 38181686 38181762 -65313212 + MTD LTR MaLR 340 419 0 4 876 194 62 0 30 chr15 38181959 38181992 -65312982 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 4 876 946 51 0 0 chr15 38182005 38182123 -65312851 + B1_Mm SINE Alu 30 147 0 4 876 1148 145 84 24 chr15 38182133 38182525 -65312449 - RMER6B LTR ERVK -10 451 1 4 876 654 221 57 0 chr15 38182549 38182689 -65312285 + B1F2 SINE Alu 2 149 0 4 876 617 110 10 0 chr15 38182689 38182789 -65312185 + (GGA)n Simple_repeat Simple_repeat 1 101 0 4 876 1497 28 0 0 chr15 38182789 38182967 -65312007 + (GAA)n Simple_repeat Simple_repeat 3 180 0 4 876 414 0 0 0 chr15 38183055 38183101 -65311873 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 876 397 283 33 8 chr15 38183104 38183225 -65311749 + B4A SINE B4 164 287 -5 4 876 207 167 0 0 chr15 38183423 38183459 -65311515 + C-rich Low_complexity Low_complexity 1 36 0 4 876 236 281 171 0 chr15 38184127 38184209 -65310765 - PB1 SINE Alu -25 102 7 4 876 225 162 300 0 chr15 38184266 38184346 -65310628 - Lx9 LINE L1 -8 7636 7533 4 876 250 150 49 16 chr15 38184352 38184474 -65310500 + (TATAA)n Simple_repeat Simple_repeat 2 127 0 4 876 3092 212 95 14 chr15 38184531 38185298 -65309676 - Lx9 LINE L1 -163 7481 6653 4 876 23 0 0 0 chr15 38185515 38185538 -65309436 + AT_rich Low_complexity Low_complexity 1 23 0 4 876 302 107 18 0 chr15 38185701 38185757 -65309217 + (TC)n Simple_repeat Simple_repeat 1 57 0 4 876 722 128 18 18 chr15 38185901 38186012 -65308962 + B1_Mur3 SINE Alu 29 139 -10 4 876 225 317 58 0 chr15 38186059 38186163 -65308811 - L1MA5 LINE L1 -33 6267 6158 4 876 237 250 0 18 chr15 38187017 38187074 -65307900 + PB1D10 SINE Alu 7 62 -55 4 876 288 0 0 0 chr15 38187180 38187212 -65307762 + (GGA)n Simple_repeat Simple_repeat 1 32 0 4 876 911 230 162 16 chr15 38187270 38187517 -65307457 + B4A SINE B4 2 284 -8 4 876 366 266 0 0 chr15 38187526 38187665 -65307309 + (CA)n Simple_repeat Simple_repeat 2 140 0 4 876 593 296 188 23 chr15 38187726 38188220 -65306754 + LTR48 LTR ERV1 3 608 -179 4 876 1304 42 0 24 chr15 38188272 38188441 -65306533 - B2_Mm2 SINE B2 -3 192 28 4 876 1335 176 18 5 chr15 38189034 38189256 -65305718 - URR1B DNA MER1_type 0 225 1 4 876 244 291 106 48 chr15 38189256 38189446 -65305528 - MLT1J2 LTR MaLR -198 213 47 4 876 1806 47 8 17 chr15 38190525 38190764 -65304210 + L1_Mus3 LINE L1 6401 6637 -1 4 876 731 241 7 7 chr15 38191440 38191518 -65303456 + ID SINE ID 7 84 -140 4 876 219 282 247 0 chr15 38191518 38191603 -65303371 + PB1D10 SINE Alu 3 108 -9 4 876 651 60 0 0 chr15 38191605 38191689 -65303285 + (GGGA)n Simple_repeat Simple_repeat 3 86 0 4 876 544 267 15 30 chr15 38192160 38192295 -65302679 - B1F SINE Alu 0 149 17 4 876 1304 211 99 36 chr15 38192293 38192477 -65302497 + RMER4B LTR ERVK 17 216 -369 4 876 249 33 0 0 chr15 38192477 38192507 -65302467 + (CTG)n Simple_repeat Simple_repeat 2 31 0 4 876 1304 211 99 36 chr15 38192507 38192686 -65302288 + RMER4B LTR ERVK 217 403 -182 4 876 259 211 141 91 chr15 38192765 38192864 -65302110 + PB1D10 SINE Alu 14 117 0 4 876 295 244 66 66 chr15 38192999 38193135 -65301839 - L1MB8 LINE L1 -35 6143 6008 4 876 237 115 62 25 chr15 38193143 38193223 -65301751 + T-rich Low_complexity Low_complexity 3 85 0 4 876 973 123 0 27 chr15 38193228 38193378 -65301596 - B1_Mus1 SINE Alu -1 147 2 4 876 857 211 66 0 chr15 38193431 38193597 -65301377 - B3 SINE B2 -39 177 1 4 876 291 268 44 9 chr15 38193644 38193757 -65301217 - L1MB8 LINE L1 -189 5985 5869 4 876 343 276 30 30 chr15 38193812 38193913 -65301061 - B1F SINE Alu -44 105 5 4 876 212 158 0 0 chr15 38194125 38194163 -65300811 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 876 373 247 0 13 chr15 38194280 38194358 -65300616 - ID4 SINE ID -5 78 2 4 876 26 0 0 27 chr15 38194384 38194404 -65300570 + AT_rich Low_complexity Low_complexity 1 20 0 5 876 941 221 85 0 chr15 38194404 38194603 -65300371 - B3 SINE B2 0 216 1 5 876 26 0 0 27 chr15 38194603 38194619 -65300355 + AT_rich Low_complexity Low_complexity 1 16 0 5 876 300 180 0 0 chr15 38194780 38194830 -65300144 + MTEb LTR MaLR 3 52 -327 5 876 355 271 63 83 chr15 38195040 38195245 -65299729 + RMER2 LTR ERV1 346 546 -21 5 876 465 50 0 0 chr15 38195353 38195413 -65299561 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 876 227 322 0 53 chr15 38195420 38195515 -65299459 + BC1_Mm scRNA scRNA 2 91 -61 5 876 402 265 9 38 chr15 38195657 38195763 -65299211 + RSINE1 SINE B4 9 111 -54 5 876 288 229 29 0 chr15 38195834 38195904 -65299070 + MTEa LTR MaLR 306 377 -2 5 876 1223 158 19 104 chr15 38195973 38196290 -65298684 - RMER1C Other Other -2 1340 1051 5 876 324 279 26 51 chr15 38196585 38196702 -65298272 + MT2B LTR ERVL 147 260 -341 5 876 670 157 86 8 chr15 38196616 38196744 -65298230 + B1_Mur1 SINE Alu 12 149 0 5 876 1039 301 64 56 chr15 38196779 38197000 -65297974 + Lx9 LINE L1 6959 7181 -463 5 876 1169 88 0 0 chr15 38197000 38197147 -65297827 - B1_Mus1 SINE Alu 0 148 2 5 876 1039 301 64 56 chr15 38197147 38197463 -65297511 + Lx9 LINE L1 7182 7503 -141 5 876 243 0 0 0 chr15 38197463 38197490 -65297484 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 876 1039 301 64 56 chr15 38197490 38197610 -65297364 + Lx9 LINE L1 7504 7620 -24 5 876 1179 82 0 0 chr15 38197647 38197794 -65297180 - B1_Mus1 SINE Alu 0 148 2 5 876 917 88 15 0 chr15 38197934 38198070 -65296904 + (GAAA)n Simple_repeat Simple_repeat 3 140 0 5 876 1266 27 0 14 chr15 38198073 38198221 -65296753 + B1_Mm SINE Alu 1 146 -1 5 876 223 208 0 0 chr15 38198395 38198443 -65296531 + PB1D10 SINE Alu 49 96 -21 5 876 505 325 89 8 chr15 38198521 38198769 -65296205 + MLT1C LTR MaLR 200 467 0 5 876 392 257 43 26 chr15 38198948 38199064 -65295910 - B1F2 SINE Alu 0 149 32 5 876 2116 162 60 12 chr15 38199162 38199561 -65295413 - MTD LTR MaLR 0 419 2 5 876 891 320 25 18 chr15 38199587 38199861 -65295113 + B4A SINE B4 11 286 -6 5 876 182 118 29 0 chr15 38199892 38199926 -65295048 + (CATA)n Simple_repeat Simple_repeat 4 38 0 5 876 332 313 0 24 chr15 38200805 38200890 -65294084 + BC1_Mm scRNA scRNA 2 84 -68 5 876 236 299 45 0 chr15 38200958 38201025 -65293949 - ID4_ SINE ID -12 71 2 5 876 1275 178 9 9 chr15 38201247 38201468 -65293506 - URR1B DNA MER1_type -2 223 3 5 876 253 241 25 82 chr15 38201980 38202062 -65292912 + (CAGAGA)n Simple_repeat Simple_repeat 2 81 0 5 876 306 0 0 0 chr15 38202062 38202096 -65292878 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 876 630 0 0 0 chr15 38202097 38202167 -65292807 + (GA)n Simple_repeat Simple_repeat 1 70 0 5 876 253 241 25 82 chr15 38202167 38202240 -65292734 + (CAGAGA)n Simple_repeat Simple_repeat 4 70 0 5 876 789 270 40 37 chr15 38202711 38202984 -65291990 + RLTR12B LTR ERVK 35 308 -220 5 876 764 259 44 73 chr15 38202985 38203260 -65291714 + RLTR12B LTR ERVK 253 519 -9 5 876 545 234 0 43 chr15 38203264 38203380 -65291594 + PB1D10 SINE Alu 7 117 0 5 876 237 294 77 58 chr15 38203703 38203858 -65291116 - MER5B DNA MER1_type -2 176 19 5 876 552 100 0 0 chr15 38204101 38204181 -65290793 + (CA)n Simple_repeat Simple_repeat 1 80 0 5 876 385 275 75 15 chr15 38204228 38204361 -65290613 - ORR1E LTR MaLR -218 141 1 5 876 2786 128 12 79 chr15 38204803 38205295 -65289679 + RMER6B LTR ERVK 1 459 -2 5 876 240 283 17 0 chr15 38205295 38205355 -65289619 + ID4 SINE ID 13 73 -10 5 876 210 213 149 0 chr15 38205996 38206043 -65288931 - PB1 SINE Alu 0 127 74 5 876 1067 137 22 17 chr15 38206196 38206216 -65288758 - B2_Mm2 SINE B2 -15 180 162 5 876 285 29 0 0 chr15 38206216 38206250 -65288724 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 5 876 1067 137 22 17 chr15 38206250 38206407 -65288567 - B2_Mm2 SINE B2 -34 161 2 5 876 271 291 12 26 chr15 38206469 38206568 -65288406 - ID4_ SINE ID -53 99 3 5 876 353 321 139 0 chr15 38206568 38206777 -65288197 - L1MB2 LINE L1 -170 6001 5764 5 876 258 240 16 7 chr15 38207010 38207080 -65287894 - L1MB2 LINE L1 -428 5755 5688 5 876 367 298 24 22 chr15 38207095 38207234 -65287740 + ID_B1 SINE B4 2 170 -54 5 876 226 286 42 28 chr15 38207175 38207247 -65287727 + B1F SINE Alu 31 103 -46 5 876 279 324 83 9 chr15 38207257 38207290 -65287684 - PB1D9 SINE Alu -32 117 6 5 876 329 324 0 0 chr15 38207290 38207361 -65287613 - ID_B1 SINE B4 -67 157 87 5 876 594 252 29 0 chr15 38207397 38207536 -65287438 - ID_B1 SINE B4 0 224 82 5 876 504 0 0 0 chr15 38208743 38208799 -65286175 + (TTCC)n Simple_repeat Simple_repeat 2 57 0 5 876 231 288 0 59 chr15 38208939 38209024 -65285950 - ID2 SINE ID -1 82 3 5 876 987 188 134 0 chr15 38209054 38209240 -65285734 + ID_B1 SINE B4 4 214 -10 5 876 350 58 0 37 chr15 38210666 38210720 -65284254 + (TTTTC)n Simple_repeat Simple_repeat 4 55 0 5 876 1247 87 49 0 chr15 38210721 38210744 -65284230 - B2_Mm1t SINE B2 -1 192 162 5 876 294 29 0 0 chr15 38210744 38210779 -65284195 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 5 876 1247 87 49 0 chr15 38210779 38210938 -65284036 - B2_Mm1t SINE B2 -32 161 2 5 876 998 96 24 0 chr15 38211166 38211332 -65283642 + (CA)n Simple_repeat Simple_repeat 2 171 0 5 876 241 89 0 0 chr15 38211377 38211422 -65283552 - B3 SINE B2 0 216 172 5 876 256 197 0 155 chr15 38211441 38211525 -65283449 - B3 SINE B2 -145 71 1 5 876 234 331 121 38 chr15 38211585 38211717 -65283257 - B1F1 SINE Alu -1 148 6 5 876 195 311 120 13 chr15 38212675 38212750 -65282224 - MIR SINE MIR -169 93 11 5 876 1055 282 14 48 chr15 38212769 38212817 -65282157 + B4 SINE B4 9 56 -236 5 876 886 203 0 0 chr15 38212817 38212965 -65282009 + RSINE1 SINE B4 2 149 -16 5 876 1055 282 14 48 chr15 38212965 38212981 -65281993 + B4 SINE B4 57 71 -221 5 876 402 21 0 0 chr15 38212981 38213028 -65281946 + (GA)n Simple_repeat Simple_repeat 2 48 0 5 876 1055 282 14 48 chr15 38213028 38213256 -65281718 + B4 SINE B4 72 291 -1 5 876 438 312 12 42 chr15 38214034 38214201 -65280773 + RSINE1 SINE B4 4 165 0 5 876 588 207 152 176 chr15 38214412 38214775 -65280199 - MTEb LTR MaLR -23 356 3 5 876 268 203 103 115 chr15 38215004 38215082 -65279892 - ID4 SINE ID 0 83 7 5 876 1385 71 16 16 chr15 38215166 38215352 -65279622 + B2_Mm2 SINE B2 1 186 -9 5 876 1554 206 53 10 chr15 38215412 38215761 -65279213 + MTB_Mm LTR MaLR 2 365 -54 5 876 1388 105 16 0 chr15 38215761 38215952 -65279022 - B2_Mm2 SINE B2 -1 194 1 5 876 1269 243 87 97 chr15 38215952 38216016 -65278958 + MTB_Mm LTR MaLR 366 411 -8 5 876 691 242 22 0 chr15 38216033 38216201 -65278773 + MLT1B LTR MaLR 189 440 -27 5 876 299 209 88 95 chr15 38216190 38216210 -65278764 - ID_B1 SINE B4 -2 222 172 5 876 304 228 75 21 chr15 38216210 38216304 -65278670 - B1F SINE Alu -19 130 32 5 876 299 209 88 95 chr15 38216304 38216338 -65278636 - ID_B1 SINE B4 -2 171 76 5 876 222 86 33 33 chr15 38216348 38216408 -65278566 + T-rich Low_complexity Low_complexity 1 60 0 5 876 1104 70 0 27 chr15 38216409 38216556 -65278418 - B1_Mus2 SINE Alu -4 143 1 5 876 790 194 21 0 chr15 38216558 38216702 -65278272 - B1F2 SINE Alu -2 147 1 5 876 2226 157 33 57 chr15 38216731 38217184 -65277790 - RMER10A LTR ERVL 0 442 1 5 876 461 242 129 32 chr15 38217266 38217390 -65277584 + ID_B1 SINE B4 80 215 -9 5 876 494 107 0 28 chr15 38217391 38217497 -65277477 + (CAGA)n Simple_repeat Simple_repeat 4 106 0 5 876 266 294 71 27 chr15 38217886 38217998 -65276976 + PB1D10 SINE Alu 1 117 0 5 876 321 131 0 0 chr15 38218018 38218079 -65276895 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 876 230 340 10 49 chr15 38218081 38218183 -65276791 - RMER12 LTR ERVK -476 846 749 5 876 280 143 14 14 chr15 38218199 38218270 -65276704 + (CA)n Simple_repeat Simple_repeat 1 71 0 5 876 260 330 128 27 chr15 38218408 38218595 -65276379 - MLT1F LTR MaLR -180 368 163 5 876 256 159 33 43 chr15 38218860 38218952 -65276022 + CT-rich Low_complexity Low_complexity 4 94 0 5 876 246 351 68 15 chr15 38219077 38219210 -65275764 - MIRm SINE MIR -135 141 2 5 876 576 289 38 24 chr15 38220860 38221073 -65273901 + ID_B1 SINE B4 1 216 -8 5 876 182 239 224 0 chr15 38221919 38221986 -65272988 - MIRm SINE MIR -21 255 174 5 876 393 224 0 26 chr15 38222208 38222286 -65272688 + MER33 DNA MER1_type 19 94 -230 5 876 405 282 127 0 chr15 38222400 38222522 -65272452 - B1_Mur1 SINE Alu -11 138 3 5 876 311 305 55 45 chr15 38222578 38222688 -65272286 + PB1D7 SINE Alu 9 119 -1 5 876 241 307 13 0 chr15 38222701 38222776 -65272198 + ID_B1 SINE B4 93 168 -56 5 876 1200 37 0 0 chr15 38223229 38223365 -65271609 + B1_Mus1 SINE Alu 1 136 -12 5 876 225 0 0 0 chr15 38223365 38223390 -65271584 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 5 876 225 0 0 0 chr15 38223418 38223443 -65271531 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 5 876 429 158 221 0 chr15 38223685 38223780 -65271194 + B1F SINE Alu 27 142 -7 5 876 254 260 13 27 chr15 38224446 38224521 -65270453 + ID4 SINE ID 4 77 -6 5 876 818 194 7 0 chr15 38226002 38226146 -65268828 + B1_Mus2 SINE Alu 1 145 -2 5 876 323 229 0 0 chr15 38226188 38226249 -65268725 - ID_B1 SINE B4 -80 144 84 5 876 225 313 2 2 chr15 38227844 38227918 -65267056 + B4A SINE B4 71 144 -148 5 876 266 284 40 0 chr15 38228326 38228400 -65266574 + ID_B1 SINE B4 125 201 -23 5 876 231 36 0 0 chr15 38228726 38228754 -65266220 + (CGGGG)n Simple_repeat Simple_repeat 4 31 0 6 876 23 0 0 0 chr15 38228889 38228912 -65266062 + GC_rich Low_complexity Low_complexity 1 23 0 6 876 35 41 0 0 chr15 38229059 38229108 -65265866 + GC_rich Low_complexity Low_complexity 1 49 0 6 876 297 0 0 0 chr15 38230113 38230146 -65264828 + (T)n Simple_repeat Simple_repeat 1 33 0 6 876 27 0 0 0 chr15 38230748 38230775 -65264199 + GC_rich Low_complexity Low_complexity 1 27 0 6 876 488 216 92 0 chr15 38232701 38232838 -65262136 - B1F1 SINE Alu 0 149 1 6 876 180 233 47 0 chr15 38233160 38233203 -65261771 - L2b LINE L2 -4 3371 3327 6 876 326 261 43 0 chr15 38233210 38233279 -65261695 - B1F2 SINE Alu -66 83 12 6 876 305 177 145 0 chr15 38233276 38233338 -65261636 + B1F SINE Alu 35 105 -44 6 876 396 0 0 0 chr15 38233562 38233606 -65261368 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 876 444 269 0 11 chr15 38233702 38233796 -65261178 - B1F SINE Alu -56 93 1 6 876 1157 71 0 0 chr15 38234865 38235005 -65259969 + B1_Mus2 SINE Alu 3 142 -5 6 876 631 157 0 16 chr15 38235005 38235134 -65259840 + GA-rich Low_complexity Low_complexity 3 129 0 6 876 909 135 12 6 chr15 38235134 38235243 -65259731 + polypurine Low_complexity Low_complexity 2 111 0 6 876 1209 67 6 22 chr15 38235243 38235426 -65259548 + (GAA)n Simple_repeat Simple_repeat 1 180 0 6 876 909 135 12 6 chr15 38235426 38235487 -65259487 + polypurine Low_complexity Low_complexity 112 172 0 6 876 1180 86 6 6 chr15 38235487 38235663 -65259311 + (GAA)n Simple_repeat Simple_repeat 3 178 0 6 876 576 308 0 14 chr15 38235702 38235847 -65259127 - B3A SINE B2 -53 145 3 6 876 1064 272 63 17 chr15 38236250 38236612 -65258362 - MTEb LTR MaLR 0 379 1 6 876 654 179 96 16 chr15 38236624 38236749 -65258225 + B1_Mur2 SINE Alu 15 149 0 6 876 356 294 160 0 chr15 38236799 38236986 -65257988 - Lx8 LINE L1 -2 7471 7255 6 876 358 254 0 0 chr15 38237087 38237158 -65257816 - B1_Mm SINE Alu -56 91 21 6 876 998 148 0 7 chr15 38237160 38237303 -65257671 + B1_Mus1 SINE Alu 1 142 -6 6 876 302 243 0 119 chr15 38237349 38237433 -65257541 + B1F SINE Alu 25 98 -51 6 876 871 170 0 13 chr15 38237511 38237660 -65257314 - B1_Mur4 SINE Alu -3 147 1 6 876 236 333 63 97 chr15 38237716 38238063 -65256911 + MLT1H2 LTR MaLR 114 475 -74 6 876 360 6 0 163 chr15 38238234 38238443 -65256531 + CT-rich Low_complexity Low_complexity 3 177 0 6 876 257 36 288 0 chr15 38238375 38238514 -65256460 + (CCTG)n Simple_repeat Simple_repeat 1 179 0 6 876 261 49 0 161 chr15 38238643 38238895 -65256079 + (CCCTG)n Simple_repeat Simple_repeat 1 211 0 6 876 23 54 0 0 chr15 38239011 38239048 -65255926 + AT_rich Low_complexity Low_complexity 1 37 0 6 876 181 246 87 58 chr15 38239149 38239218 -65255756 + L2 LINE L2 1260 1330 -2089 6 876 310 235 49 12 chr15 38239284 38239366 -65255608 - B4A SINE B4 -207 85 1 6 876 935 244 14 18 chr15 38239390 38239611 -65255363 - ID_B1 SINE B4 -2 222 3 6 876 718 162 0 8 chr15 38239990 38240108 -65254866 - B3 SINE B2 -86 130 14 6 876 544 281 25 8 chr15 38240217 38240339 -65254635 + RSINE1 SINE B4 17 140 -25 6 876 321 26 0 0 chr15 38240339 38240377 -65254597 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 876 388 244 0 0 chr15 38240422 38240500 -65254474 - ID4_ SINE ID -4 79 2 6 876 255 174 22 0 chr15 38240765 38240811 -65254163 - ZP3AR Satellite Satellite -124 88 42 6 876 238 272 0 0 chr15 38241048 38241106 -65253868 + ID4 SINE ID 31 88 -64 6 876 186 43 0 0 chr15 38241140 38241163 -65253811 + (CG)n Simple_repeat Simple_repeat 2 24 0 6 876 468 0 0 0 chr15 38241163 38241214 -65253760 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 876 258 304 21 42 chr15 38241215 38241311 -65253663 - RSINE1 SINE B4 -24 141 48 6 876 649 261 36 42 chr15 38241581 38241773 -65253201 - Charlie4a DNA MER1_type -316 192 2 6 876 900 252 35 0 chr15 38241843 38242041 -65252933 - B3 SINE B2 -5 211 7 6 876 384 254 339 21 chr15 38242164 38242405 -65252569 - MLT1A0 LTR MaLR -48 317 1 6 876 252 282 14 0 chr15 38242881 38242952 -65252022 - ID4 SINE ID 0 83 12 6 876 2302 80 19 13 chr15 38242983 38243301 -65251673 + ORR1A2 LTR MaLR 1 320 -7 6 876 429 262 29 10 chr15 38243301 38243405 -65251569 - PB1D10 SINE Alu -11 106 1 6 876 229 300 12 59 chr15 38243410 38243495 -65251479 - MER5A1 DNA MER1_type -55 111 31 6 876 518 255 34 47 chr15 38243845 38243993 -65250981 - B1F1 SINE Alu -1 148 3 6 876 334 219 81 40 chr15 38244698 38244822 -65250152 + B1F SINE Alu 21 149 0 6 876 324 254 0 0 chr15 38244836 38244903 -65250071 + RSINE1 SINE B4 1 67 -98 6 876 876 136 26 37 chr15 38244934 38245130 -65249844 + B3 SINE B2 2 191 -4 6 876 651 254 10 45 chr15 38245807 38245977 -65248997 - B1F2 SINE Alu -10 301 5 6 876 522 164 116 34 chr15 38246647 38246786 -65248188 + B1F SINE Alu 2 149 0 6 876 236 111 111 0 chr15 38247249 38247294 -65247680 + B3A SINE B2 2 51 -147 6 876 2204 173 120 31 chr15 38247294 38247385 -65247589 - RLTR20C LTR ERVK 0 534 442 6 876 216 0 0 0 chr15 38247385 38247409 -65247565 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 876 2204 173 120 31 chr15 38247409 38247807 -65247167 - RLTR20C LTR ERVK -93 441 3 6 876 331 184 39 13 chr15 38247807 38247884 -65247090 + B3A SINE B2 46 124 -74 6 876 256 246 70 0 chr15 38248274 38248331 -65246643 - ID4_ SINE ID -22 61 1 6 876 535 213 115 0 chr15 38248435 38248557 -65246417 + B1F SINE Alu 13 148 -1 6 876 304 222 77 71 chr15 38248890 38249045 -65245929 + YREP_Mm Unknown Unknown 139 294 -1518 6 876 525 235 35 9 chr15 38248930 38249046 -65245928 - ID_B1 SINE B4 -3 221 103 6 876 2315 79 27 59 chr15 38249192 38249530 -65245444 + ORR1A2 LTR MaLR 1 327 0 6 876 478 248 20 0 chr15 38250924 38251025 -65243949 + PB1D7 SINE Alu 1 103 -17 6 876 280 293 12 12 chr15 38251306 38251389 -65243585 - ID4 SINE ID 0 83 1 6 876 450 299 0 0 chr15 38251406 38251523 -65243451 - PB1D10 SINE Alu 0 117 1 6 876 597 162 0 0 chr15 38251534 38251645 -65243329 + CT-rich Low_complexity Low_complexity 2 112 0 6 876 807 193 0 35 chr15 38251654 38251799 -65243175 - B1_Mus1 SINE Alu -6 142 3 6 876 1543 191 153 6 chr15 38252401 38252754 -65242220 + MTD LTR MaLR 1 405 -14 6 876 242 333 13 0 chr15 38252933 38253011 -65241963 + MER96 DNA hAT 1 79 -96 6 876 190 253 66 13 chr15 38253191 38253267 -65241707 + MER5A DNA MER1_type 7 86 -103 6 876 446 208 59 10 chr15 38254614 38254716 -65240258 + B1F SINE Alu 43 149 0 6 876 204 183 33 0 chr15 38254716 38254776 -65240198 + (CAA)n Simple_repeat Simple_repeat 2 63 0 6 876 302 272 60 99 chr15 38255196 38255347 -65239627 + L2c LINE L2 3242 3386 -1 6 876 339 25 0 0 chr15 38255377 38255417 -65239557 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 876 321 303 58 43 chr15 38255992 38256130 -65238844 + MIRb SINE MIR 65 204 -64 6 876 524 284 152 0 chr15 38256176 38256373 -65238601 + LTR33C LTR ERVL 128 354 -275 6 876 1120 75 0 40 chr15 38256493 38256632 -65238342 + B1_Mus2 SINE Alu 2 137 -10 6 876 423 0 0 0 chr15 38256632 38256679 -65238295 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 6 876 1120 75 0 40 chr15 38256679 38256691 -65238283 + B1_Mus2 SINE Alu 138 147 0 6 876 274 262 0 0 chr15 38256877 38256938 -65238036 + tRNA-Ala-GCY_ tRNA tRNA 11 71 -4 6 876 221 361 24 0 chr15 38257278 38257361 -65237613 + L2c LINE L2 3082 3166 -221 6 876 352 298 39 47 chr15 38257393 38257520 -65237454 + MER20 DNA MER1_type 1 126 -93 6 876 754 238 0 13 chr15 38259264 38259413 -65235561 + B1F SINE Alu 3 149 0 6 876 800 228 68 16 chr15 38259416 38259608 -65235366 + B3 SINE B2 1 202 -14 6 876 352 212 0 29 chr15 38259608 38259676 -65235298 + ID_B1 SINE B4 158 223 -1 6 876 358 261 16 90 chr15 38259829 38259951 -65235023 + PB1D10 SINE Alu 4 116 -1 6 876 251 337 94 10 chr15 38260370 38260466 -65234508 + MIRc SINE MIR 47 150 -118 6 876 304 310 35 12 chr15 38260751 38260836 -65234138 - B4A SINE B4 -205 87 1 6 876 2562 80 3 3 chr15 38260838 38261165 -65233809 + ORR1A2 LTR MaLR 1 327 0 6 876 774 134 0 0 chr15 38261313 38261440 -65233534 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 6 876 1152 42 0 0 chr15 38261440 38261582 -65233392 + (TCTCC)n Simple_repeat Simple_repeat 5 146 0 6 876 918 169 7 0 chr15 38261587 38261729 -65233245 - B1_Mur4 SINE Alu -7 143 1 6 876 275 276 0 0 chr15 38262369 38262427 -65232547 + ID SINE ID 24 81 -143 6 876 495 277 39 0 chr15 38262619 38262749 -65232225 + ID_B1 SINE B4 87 221 -3 6 876 442 238 65 101 chr15 38263107 38263275 -65231699 + B4A SINE B4 1 162 -130 6 876 423 0 0 0 chr15 38263316 38263363 -65231611 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 876 603 271 0 7 chr15 38263367 38263508 -65231466 - B1F2 SINE Alu -9 140 1 6 876 305 231 95 53 chr15 38263517 38263686 -65231288 - Lx7 LINE L1 -15 7681 7506 6 876 189 195 0 0 chr15 38263699 38263740 -65231234 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 876 3328 219 51 9 chr15 38263747 38264490 -65230484 - Lx7 LINE L1 -388 7308 6535 6 876 1266 254 23 58 chr15 38264494 38265143 -65229831 + Lx7 LINE L1 5295 5919 -1777 6 876 438 323 0 97 chr15 38265639 38265824 -65229150 + MER20 DNA MER1_type 1 167 -52 6 876 1085 253 58 99 chr15 38266390 38266587 -65228387 + MTD LTR MaLR 10 210 -209 7 876 1270 195 5 0 chr15 38266587 38266802 -65228172 + B3 SINE B2 1 216 0 7 876 1085 244 50 69 chr15 38266802 38267024 -65227950 + MTD LTR MaLR 211 405 -14 7 876 354 138 0 0 chr15 38267085 38267143 -65227831 + (GGA)n Simple_repeat Simple_repeat 2 59 0 7 876 654 262 85 46 chr15 38267488 38267775 -65227199 - MLT1A1 LTR MaLR -2 406 74 7 876 246 32 0 0 chr15 38268021 38268052 -65226922 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 876 240 299 37 61 chr15 38268385 38268467 -65226507 - MTEa LTR MaLR -281 98 19 7 876 202 360 50 29 chr15 38268509 38268649 -65226325 + MIRb SINE MIR 55 197 -71 7 876 1066 199 30 0 chr15 38268957 38269158 -65225816 - B3 SINE B2 -7 209 3 7 876 1866 147 5 69 chr15 38269177 38269546 -65225428 + ORR1B2 LTR MaLR 1 318 -28 7 876 2254 240 25 13 chr15 38269573 38270100 -65224874 + RodERV21-int LTR ERV1 1446 1978 -3013 7 876 417 313 116 94 chr15 38270521 38271032 -65223942 + RodERV21-int LTR ERV1 2718 3239 -1752 7 876 202 236 64 77 chr15 38271047 38271125 -65223849 - L3 LINE CR1 -3556 933 857 7 876 2519 335 29 21 chr15 38271487 38272569 -65222405 + RodERV21-int LTR ERV1 3730 4819 -172 7 876 242 252 143 67 chr15 38272580 38272699 -65222275 + RMER4B LTR ERVK 349 476 -109 7 109 561 30 0 0 chr15 38272969 38273036 -65221938 + (CA)n Simple_repeat Simple_repeat 2 68 0 7 877 273 279 22 43 chr15 38273159 38273279 -65221695 - MIR SINE MIR -80 128 20 7 877 344 167 294 0 chr15 38273346 38273448 -65221526 - ORR1D1 LTR MaLR 0 374 243 7 877 399 346 6 60 chr15 38274152 38274318 -65220656 - B4 SINE B4 -74 218 62 7 877 546 298 43 0 chr15 38274354 38274495 -65220479 - RSINE1 SINE B4 -16 149 3 7 877 198 0 0 0 chr15 38274853 38274875 -65220099 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 7 877 361 317 0 84 chr15 38274960 38275091 -65219883 + MTEa LTR MaLR 1 120 -259 7 877 243 0 0 0 chr15 38275173 38275200 -65219774 + (TC)n Simple_repeat Simple_repeat 1 27 0 7 877 261 0 0 0 chr15 38275201 38275230 -65219744 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 877 386 225 58 0 chr15 38275236 38275374 -65219600 + (TCTCTG)n Simple_repeat Simple_repeat 2 147 0 7 877 228 289 113 19 chr15 38275689 38275795 -65219179 - PB1D10 SINE Alu -1 116 1 7 877 3546 23 0 0 chr15 38276167 38276561 -65218413 + MTA_Mm LTR MaLR 3 396 0 7 877 410 294 27 9 chr15 38276586 38276696 -65218278 - PB1D10 SINE Alu 0 117 6 7 877 654 125 0 8 chr15 38276789 38276918 -65218056 - L1_Mus4 LINE L1 -2 6634 6507 7 877 1064 190 56 0 chr15 38276945 38277140 -65217834 - B3 SINE B2 -9 207 2 7 877 183 243 0 0 chr15 38277667 38277704 -65217270 + MIRm SINE MIR 221 257 -19 7 877 277 296 73 18 chr15 38277768 38277878 -65217096 + MLT1A0 LTR MaLR 6 121 -244 7 877 595 227 76 0 chr15 38277962 38278081 -65216893 + B1_Mus1 SINE Alu 2 129 -19 7 877 347 226 0 6 chr15 38278090 38278250 -65216724 + (TG)n Simple_repeat Simple_repeat 2 160 0 7 877 612 186 0 0 chr15 38278262 38278434 -65216540 + (TG)n Simple_repeat Simple_repeat 2 173 0 7 877 628 263 0 0 chr15 38278696 38278829 -65216145 + ID_B1 SINE B4 90 222 -2 7 877 709 201 45 0 chr15 38278851 38278985 -65215989 + B1F1 SINE Alu 1 140 -9 7 877 468 273 58 50 chr15 38278996 38279135 -65215839 + ID_B1 SINE B4 85 224 0 7 877 537 256 45 100 chr15 38280039 38280225 -65214749 + B4A SINE B4 1 175 -117 7 877 1448 217 96 40 chr15 38280225 38280600 -65214374 + MTD LTR MaLR 1 396 -23 7 877 929 171 0 7 chr15 38280580 38280727 -65214247 - B1_Mur2 SINE Alu 0 149 4 7 877 1217 117 11 0 chr15 38280786 38280966 -65214008 - RLTR17 LTR ERVK -60 632 451 7 877 270 257 41 114 chr15 38281115 38281238 -65213736 + MLT1D LTR MaLR 23 136 -491 7 877 790 214 49 39 chr15 38281639 38281843 -65213131 + MLT1D LTR MaLR 248 453 -52 7 877 570 214 119 22 chr15 38281835 38281969 -65213005 - B1_Mur1 SINE Alu -1 148 2 7 877 2237 176 65 45 chr15 38282089 38282536 -65212438 + RMER19C LTR ERVK 142 597 -14 7 877 210 296 0 0 chr15 38282690 38282744 -65212230 + L2a LINE L2 3370 3423 -3 7 877 953 245 24 0 chr15 38282932 38283140 -65211834 + B3 SINE B2 4 216 0 7 877 2750 164 189 9 chr15 38283173 38283751 -65211223 + RMER1B Other Other 375 1056 -10 7 877 228 35 0 0 chr15 38283792 38283821 -65211153 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 877 542 248 10 0 chr15 38283946 38284047 -65210927 + B1F SINE Alu 9 110 -39 7 877 1157 206 9 9 chr15 38284092 38284312 -65210662 + ID_B1 SINE B4 1 220 -4 7 877 189 0 0 0 chr15 38284541 38284562 -65210412 + (CAA)n Simple_repeat Simple_repeat 1 21 0 7 877 550 222 57 164 chr15 38284573 38284938 -65210036 - RLTR15 LTR ERVK -17 342 18 7 877 1450 73 11 0 chr15 38284938 38285129 -65209845 + B2_Mm1t SINE B2 1 193 0 7 877 550 222 57 164 chr15 38285129 38285146 -65209828 - RLTR15 LTR ERVK -342 17 1 7 877 220 278 220 9 chr15 38285342 38285451 -65209523 - L2a LINE L2 0 3426 3295 7 877 201 39 0 0 chr15 38285530 38285556 -65209418 + (TCTCTG)n Simple_repeat Simple_repeat 4 29 0 7 877 423 0 0 0 chr15 38285561 38285608 -65209366 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 877 323 307 104 7 chr15 38285949 38286103 -65208871 - B4A SINE B4 -18 274 106 7 877 249 341 216 15 chr15 38286182 38286316 -65208658 + MER115 DNA Tip100 107 267 -426 7 877 350 351 134 7 chr15 38286337 38286644 -65208330 + MER115 DNA Tip100 306 651 -42 7 877 742 211 171 11 chr15 38286891 38287078 -65207896 + ID_B1 SINE B4 1 217 -7 7 877 381 277 140 51 chr15 38287476 38287823 -65207151 - MLT1C LTR MaLR -10 457 78 7 877 721 254 171 2 chr15 38287842 38288117 -65206857 - MTEb LTR MaLR -9 370 27 7 877 401 237 15 113 chr15 38289396 38289529 -65205445 - MER20 DNA MER1_type -2 217 98 7 877 384 284 86 39 chr15 38289733 38289861 -65205113 + B3A SINE B2 24 157 -41 7 877 1082 171 98 0 chr15 38290320 38290525 -65204449 - URR1A DNA MER1_type 0 226 2 7 877 375 78 0 0 chr15 38290590 38290641 -65204333 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 7 877 2656 126 56 106 chr15 38290683 38291294 -65203680 + RMER6C LTR ERVK 5 584 -106 7 877 414 245 53 26 chr15 38291618 38291731 -65203243 - PB1D10 SINE Alu 0 117 2 7 877 240 255 18 125 chr15 38291638 38291750 -65203224 - MT2B LTR ERVL -355 246 147 7 877 667 299 37 0 chr15 38291825 38291900 -65203074 + ID SINE ID 1 81 -143 7 877 363 294 73 9 chr15 38291900 38292010 -65202964 + PB1D10 SINE Alu 1 117 0 7 877 598 259 73 9 chr15 38292172 38292342 -65202632 + B3A SINE B2 2 186 -9 7 877 751 190 0 72 chr15 38292460 38292613 -65202361 - B1_Mus1 SINE Alu -5 143 2 7 877 1141 90 66 0 chr15 38292979 38293146 -65201828 + B2_Mm1t SINE B2 2 179 -14 7 877 761 43 0 0 chr15 38293184 38293277 -65201697 - B1_Mm SINE Alu -9 138 46 7 877 299 197 90 26 chr15 38293218 38293296 -65201678 - RLTR25B LTR ERVK -519 509 427 7 877 356 257 181 0 chr15 38293312 38293417 -65201557 - RSINE1 SINE B4 -4 161 38 7 877 237 317 49 0 chr15 38293433 38293515 -65201459 - PB1D9 SINE Alu -6 114 29 7 877 396 0 0 0 chr15 38293842 38293886 -65201088 + (TC)n Simple_repeat Simple_repeat 1 44 0 7 877 198 289 94 24 chr15 38293891 38293976 -65200998 + L2b LINE L2 3279 3369 -6 7 877 622 312 46 19 chr15 38294593 38294854 -65200120 - ORR1E LTR MaLR -91 268 1 7 877 1540 228 80 78 chr15 38295458 38295505 -65199469 - RLTR20B3 LTR ERVK -43 534 485 7 877 432 0 0 0 chr15 38295505 38295553 -65199421 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 877 1540 228 80 78 chr15 38295553 38296018 -65198956 - RLTR20B3 LTR ERVK -93 484 23 7 877 423 328 113 17 chr15 38296210 38296387 -65198587 - RMER30 DNA MER1_type -2 200 7 7 877 556 293 0 8 chr15 38296532 38296666 -65198308 - MER94 DNA AcHobo 0 134 2 7 877 2555 106 70 3 chr15 38296839 38297208 -65197766 + ORR1B1 LTR MaLR 1 394 0 7 877 195 274 73 89 chr15 38297448 38297572 -65197402 + MIRb SINE MIR 105 226 -42 7 877 468 301 186 23 chr15 38297982 38298203 -65196771 + MLT1H LTR MaLR 220 476 -73 7 877 863 232 85 5 chr15 38298637 38298836 -65196138 - B3 SINE B2 0 216 2 7 877 706 304 62 112 chr15 38299247 38299650 -65195324 - MLT1B LTR MaLR -7 383 1 7 877 332 240 146 0 chr15 38299977 38300073 -65194901 - PB1D10 SINE Alu -5 112 3 7 877 417 250 18 18 chr15 38300610 38300720 -65194254 - MIR SINE MIR -118 144 35 7 877 434 322 77 54 chr15 38302020 38302151 -65192823 - MER2 DNA MER2_type -10 335 212 7 877 4073 116 69 5 chr15 38302151 38302658 -65192316 + Lx LINE L1 5988 6535 -119 7 877 297 0 0 0 chr15 38302658 38302691 -65192283 + (TGGG)n Simple_repeat Simple_repeat 2 34 0 7 877 4073 116 69 5 chr15 38302691 38302808 -65192166 + Lx LINE L1 6536 6652 -2 7 877 434 322 77 54 chr15 38302808 38302935 -65192039 - MER2 DNA MER2_type -134 211 71 7 877 212 200 73 0 chr15 38303131 38303186 -65191788 + MIR SINE MIR 63 121 -141 7 877 1003 16 158 0 chr15 38304167 38304294 -65190680 + B1_Mm SINE Alu 1 147 0 7 877 189 0 0 0 chr15 38304294 38304315 -65190659 + (A)n Simple_repeat Simple_repeat 1 21 0 7 877 223 319 42 0 chr15 38304430 38304502 -65190472 - B1F1 SINE Alu -74 75 1 7 877 312 315 11 0 chr15 38305066 38305155 -65189819 + B4A SINE B4 2 91 -201 7 877 273 350 85 17 chr15 38305298 38305475 -65189499 - MIRb SINE MIR -43 225 37 7 877 736 295 152 26 chr15 38305573 38306272 -65188702 + L2a LINE L2 2611 3409 -17 7 877 515 239 77 0 chr15 38306567 38306697 -65188277 - B1F SINE Alu -6 143 4 7 877 270 297 22 0 chr15 38306834 38306903 -65188071 + MLT1B LTR MaLR 272 340 -50 7 877 563 257 149 0 chr15 38306903 38307078 -65187896 + RMER30 DNA MER1_type 1 201 -1 8 877 270 297 22 0 chr15 38307078 38307099 -65187875 + MLT1B LTR MaLR 341 363 -27 7 877 507 315 0 0 chr15 38307233 38307360 -65187614 - RSINE1 SINE B4 -38 127 1 8 877 471 286 29 6 chr15 38307504 38307623 -65187351 + MTE2b LTR MaLR 63 180 -199 8 877 600 301 22 14 chr15 38307623 38307761 -65187213 + RSINE1 SINE B4 3 141 -24 8 877 396 0 0 0 chr15 38307782 38307826 -65187148 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 877 956 238 21 0 chr15 38307854 38308047 -65186927 + MTE2b LTR MaLR 169 365 -14 8 877 457 227 8 78 chr15 38308276 38308405 -65186569 + PB1D7 SINE Alu 1 120 0 8 877 671 250 65 11 chr15 38308794 38308980 -65185994 - ORR1E LTR MaLR -163 196 1 8 877 1203 62 14 0 chr15 38309091 38309237 -65185737 - B1_Mus1 SINE Alu 0 148 1 8 877 348 24 0 0 chr15 38309288 38309329 -65185645 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 877 195 293 60 113 chr15 38309443 38309593 -65185381 - L2 LINE L2 -2903 516 375 8 877 183 259 101 67 chr15 38309719 38309868 -65185106 - L2c LINE L2 -180 3207 3054 8 877 258 32 0 0 chr15 38310303 38310334 -65184640 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 877 216 67 0 0 chr15 38310334 38310364 -65184610 + (GA)n Simple_repeat Simple_repeat 2 31 0 8 877 668 167 6 0 chr15 38310797 38310965 -65184009 + (CA)n Simple_repeat Simple_repeat 1 169 0 8 877 600 211 0 2 chr15 38310985 38311408 -65183566 + (CA)n Simple_repeat Simple_repeat 1 421 0 8 877 366 303 82 5 chr15 38311490 38311676 -65183298 - MLT1D LTR MaLR 0 505 271 8 877 234 91 0 0 chr15 38312105 38312138 -65182836 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 8 877 352 300 55 0 chr15 38312146 38312270 -65182704 - B1F1 SINE Alu -20 128 1 8 877 305 320 126 27 chr15 38312298 38312481 -65182493 - Charlie15a DNA MER1_type -5 219 19 8 877 382 244 0 12 chr15 38312613 38312696 -65182278 - ID4_ SINE ID 0 83 2 8 877 427 112 44 56 chr15 38312799 38312861 -65182113 + (CA)n Simple_repeat Simple_repeat 2 60 0 8 877 252 0 0 0 chr15 38312861 38312889 -65182085 + (CCA)n Simple_repeat Simple_repeat 2 29 0 8 877 427 112 44 56 chr15 38312889 38313006 -65181968 + (CA)n Simple_repeat Simple_repeat 1 119 0 8 877 511 128 42 24 chr15 38313032 38313200 -65181774 + (CA)n Simple_repeat Simple_repeat 2 172 0 8 877 467 128 77 3 chr15 38313229 38313318 -65181656 + ORR1C2 LTR MaLR 282 384 0 8 877 269 306 28 0 chr15 38313412 38313484 -65181490 - MLT1D LTR MaLR -431 74 1 8 877 189 314 35 34 chr15 38313492 38313607 -65181367 + L2b LINE L2 3112 3230 -157 8 877 312 115 19 0 chr15 38315018 38315070 -65179904 + ID SINE ID 1 53 -171 8 877 686 218 24 0 chr15 38315430 38315554 -65179420 - RSINE1 SINE B4 -37 128 2 8 877 859 207 138 26 chr15 38315852 38316041 -65178933 + B3 SINE B2 1 210 -6 8 877 433 319 20 90 chr15 38316167 38316367 -65178607 - B4A SINE B4 -104 188 3 8 877 404 318 159 19 chr15 38316402 38316659 -65178315 - MER102a DNA MER1_type -10 320 28 8 877 2195 135 52 0 chr15 38317843 38318190 -65176784 - RMER19B LTR ERVK -8 894 530 8 877 258 327 91 40 chr15 38318189 38318364 -65176610 + RMER13A LTR ERVK 583 766 -94 8 877 370 303 208 24 chr15 38318986 38319493 -65175481 - L2a LINE L2 -340 3086 2478 8 877 749 272 133 21 chr15 38320519 38320804 -65174170 - Charlie4a DNA MER1_type -27 481 165 8 877 318 315 52 30 chr15 38321637 38321771 -65173203 - MIRb SINE MIR -55 213 77 8 877 369 0 0 0 chr15 38323721 38323762 -65171212 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 877 251 270 10 128 chr15 38323839 38323850 -65171124 + MT2B LTR ERVL 162 251 -350 8 877 459 227 11 33 chr15 38323850 38323941 -65171033 + B1_Mur4 SINE Alu 11 99 -51 8 877 294 29 0 0 chr15 38323950 38323985 -65170989 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 8 877 355 118 132 23 chr15 38324063 38324412 -65170562 + (GGATG)n Simple_repeat Simple_repeat 1 387 0 8 877 988 194 96 73 chr15 38324430 38324798 -65170176 + RLTR20C LTR ERVK 1 458 -93 8 877 377 20 20 0 chr15 38324798 38324848 -65170126 + (TG)n Simple_repeat Simple_repeat 1 51 0 8 877 854 161 17 95 chr15 38324848 38324948 -65170026 + RLTR20C LTR ERVK 459 551 0 8 877 186 43 0 0 chr15 38325633 38325656 -65169318 + (CACCC)n Simple_repeat Simple_repeat 3 25 0 8 877 191 135 81 0 chr15 38325807 38325844 -65169130 - L2b LINE L2 -15 3360 3321 8 877 413 81 16 0 chr15 38326190 38326252 -65168722 + (TTTTC)n Simple_repeat Simple_repeat 2 64 0 8 877 1196 28 0 0 chr15 38326254 38326397 -65168577 - B1_Mus1 SINE Alu 0 148 6 8 877 580 197 39 90 chr15 38326257 38326413 -65168561 - B4 SINE B4 -69 223 76 8 877 254 156 178 0 chr15 38326417 38326507 -65168467 + (CCCCAG)n Simple_repeat Simple_repeat 1 106 0 8 877 5770 53 1 0 chr15 38326861 38327596 -65167378 + L1Md_F2 LINE L1 4851 5586 -297 8 877 8497 36 1 0 chr15 38327597 38328579 -65166395 + L1Md_F2 LINE L1 5588 6570 -12 8 877 313 233 78 0 chr15 38329184 38329300 -65165674 + RLTR19-int LTR ERVK 2723 2847 -3290 8 877 228 241 0 0 chr15 38330326 38330380 -65164594 + CT-rich Low_complexity Low_complexity 2 55 0 8 877 1347 38 0 0 chr15 38330583 38330740 -65164234 + B2_Mm1a SINE B2 4 160 -33 8 877 261 0 0 0 chr15 38330740 38330769 -65164205 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 8 877 1757 186 73 33 chr15 38330837 38331259 -65163715 + RMER10A LTR ERVL 4 442 0 8 877 478 106 29 0 chr15 38332086 38332190 -65162784 + (TCTG)n Simple_repeat Simple_repeat 2 108 0 8 877 254 141 0 72 chr15 38332400 38332469 -65162505 + RLTR19-int LTR ERVK 896 959 -5178 8 877 456 263 0 0 chr15 38333871 38333985 -65160989 + MERVK26-int LTR ERVK 6506 6619 -300 8 877 396 0 0 0 chr15 38334250 38334294 -65160680 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 877 282 314 59 66 chr15 38335447 38335613 -65159361 - ID_B1 SINE B4 -50 242 76 8 877 412 224 10 94 chr15 38336631 38336658 -65158316 - PB1D10 SINE Alu 0 148 41 8 877 427 263 0 10 chr15 38336658 38336758 -65158216 - ID_B1 SINE B4 -35 189 91 8 877 515 270 143 42 chr15 38337604 38337939 -65157035 + MLT1C LTR MaLR 40 422 -45 8 877 183 80 0 0 chr15 38338259 38338284 -65156690 + (CCCTAA)n Simple_repeat Simple_repeat 3 27 0 8 877 969 222 19 5 chr15 38338328 38338536 -65156438 + B3 SINE B2 1 211 -5 8 877 277 376 9 0 chr15 38338544 38338653 -65156321 - PB1D10 SINE Alu -7 110 1 8 877 484 306 16 0 chr15 38338653 38338686 -65156288 - ID SINE ID -142 82 48 8 877 275 220 17 17 chr15 38339326 38339386 -65155588 - ID SINE ID -140 84 25 8 877 465 34 0 0 chr15 38339386 38339445 -65155529 + (CA)n Simple_repeat Simple_repeat 1 59 0 8 877 231 260 58 102 chr15 38339592 38339630 -65155344 - YREP_Mm Unknown Unknown -1461 351 320 8 877 525 326 7 34 chr15 38339630 38339776 -65155198 + B1F SINE Alu 2 143 -6 8 877 1120 156 51 42 chr15 38339824 38340038 -65154936 + B3 SINE B2 1 216 0 8 877 477 0 0 0 chr15 38340139 38340192 -65154782 + (GA)n Simple_repeat Simple_repeat 1 53 0 8 877 420 20 0 0 chr15 38340674 38340723 -65154251 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 8 877 1153 49 0 0 chr15 38340725 38340867 -65154107 - B1_Mus1 SINE Alu -1 147 6 8 877 270 203 65 39 chr15 38340893 38340970 -65154004 + RLTR25B LTR ERVK 424 502 -526 8 877 663 174 0 0 chr15 38340904 38341013 -65153961 + B1_Mus1 SINE Alu 39 147 -1 8 877 207 0 0 0 chr15 38341071 38341094 -65153880 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 8 877 214 242 105 10 chr15 38341234 38341342 -65153632 - ID2 SINE ID -29 123 6 8 877 839 172 0 7 chr15 38341608 38341754 -65153220 + B1_Mus1 SINE Alu 2 146 -2 8 877 198 0 0 0 chr15 38341857 38341879 -65153095 + (TG)n Simple_repeat Simple_repeat 2 23 0 8 877 236 272 68 14 chr15 38341924 38341944 -65153030 - ID4 SINE ID -59 93 7 8 877 264 194 79 16 chr15 38341944 38342007 -65152967 - tRNA-Ala-GCA tRNA tRNA -8 67 1 8 877 300 244 170 55 chr15 38342097 38342279 -65152695 - L1M5 LINE L1 -1081 5065 4863 8 877 273 312 106 9 chr15 38342282 38342395 -65152579 - MIRm SINE MIR -107 169 46 8 877 862 302 22 36 chr15 38343570 38343848 -65151126 + MTD LTR MaLR 1 274 -145 8 877 393 319 43 7 chr15 38343891 38344030 -65150944 + MTD LTR MaLR 276 419 0 8 877 24 0 0 0 chr15 38344415 38344439 -65150535 + AT_rich Low_complexity Low_complexity 1 24 0 8 877 1333 222 91 35 chr15 38344829 38345226 -65149748 - MTD LTR MaLR 0 419 1 8 877 359 286 66 9 chr15 38345229 38345335 -65149639 + PB1 SINE Alu 13 124 -3 8 877 239 247 10 150 chr15 38345326 38345426 -65149548 + MT2B2 LTR ERVL 151 236 -348 8 877 449 298 0 17 chr15 38345353 38345469 -65149505 + ID_B1 SINE B4 87 200 -24 8 877 272 312 0 91 chr15 38345426 38345514 -65149460 + B1_Mur4 SINE Alu 60 139 -11 8 877 320 309 5 63 chr15 38345583 38345773 -65149201 + (TG)n Simple_repeat Simple_repeat 2 180 0 8 877 343 335 0 13 chr15 38345747 38345993 -65148981 + (TG)n Simple_repeat Simple_repeat 1 242 0 8 877 208 323 4 13 chr15 38346000 38346238 -65148736 + (TATG)n Simple_repeat Simple_repeat 1 235 0 8 877 390 303 11 17 chr15 38346396 38346574 -65148400 + (TG)n Simple_repeat Simple_repeat 2 178 0 8 877 22 35 0 0 chr15 38346649 38346678 -65148296 + AT_rich Low_complexity Low_complexity 1 29 0 8 877 411 282 125 31 chr15 38346686 38346814 -65148160 + RSINE1 SINE B4 5 144 -21 8 877 24 0 0 0 chr15 38346820 38346844 -65148130 + AT_rich Low_complexity Low_complexity 1 24 0 8 877 441 282 73 0 chr15 38346873 38346997 -65147977 + B1_Mus2 SINE Alu 3 135 -12 8 877 357 24 0 0 chr15 38346997 38347039 -65147935 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 8 877 2554 133 31 0 chr15 38347054 38347436 -65147538 - ORR1B1 LTR MaLR 0 394 1 8 877 516 210 67 0 chr15 38348299 38348418 -65146556 + B1_Mus1 SINE Alu 15 141 -7 8 877 245 250 0 16 chr15 38348418 38348479 -65146495 + GA-rich Low_complexity Low_complexity 2 61 0 9 877 645 182 159 0 chr15 38348485 38348611 -65146363 + B3 SINE B2 63 208 -8 9 877 181 415 92 0 chr15 38348685 38348815 -65146159 - MIR SINE MIR -21 241 100 9 877 656 269 222 6 chr15 38348947 38349296 -65145678 - MLT1D LTR MaLR -7 498 74 9 877 585 267 55 0 chr15 38349676 38349822 -65145152 + RSINE1 SINE B4 4 157 -8 9 877 184 179 0 25 chr15 38350168 38350208 -65144766 - L3 LINE CR1 -428 4061 4023 9 877 311 281 20 20 chr15 38351206 38351304 -65143670 - MIR3 SINE MIR -30 178 81 9 877 459 0 0 0 chr15 38351312 38351363 -65143611 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 877 196 281 0 0 chr15 38351578 38351635 -65143339 - MIRb SINE MIR -159 109 53 9 877 189 0 0 0 chr15 38352061 38352082 -65142892 + (CA)n Simple_repeat Simple_repeat 2 22 0 9 877 465 19 0 0 chr15 38352082 38352135 -65142839 + (GA)n Simple_repeat Simple_repeat 2 55 0 9 877 616 230 14 41 chr15 38352211 38352356 -65142618 - B1F2 SINE Alu -8 141 1 9 877 376 273 9 43 chr15 38353811 38353926 -65141048 + ID_B1 SINE B4 114 224 0 9 877 22 56 0 0 chr15 38353928 38353964 -65141010 + AT_rich Low_complexity Low_complexity 1 36 0 9 877 1505 115 58 14 chr15 38353984 38354275 -65140699 - MYSERV16_I-int LTR ERVK -913 1413 1110 9 877 1363 74 11 0 chr15 38354282 38354458 -65140516 + B2_Mm1t SINE B2 2 179 -14 9 877 363 118 322 0 chr15 38354524 38354631 -65140343 + B2_Mm2 SINE B2 47 191 -4 9 877 1192 75 0 0 chr15 38354636 38354783 -65140191 + B1_Mus1 SINE Alu 2 148 0 9 877 216 97 0 0 chr15 38354783 38354814 -65140160 + (A)n Simple_repeat Simple_repeat 1 31 0 9 877 751 148 0 8 chr15 38354849 38354972 -65140002 + MYSERV16_I-int LTR ERVK 812 933 -1393 9 877 255 133 0 0 chr15 38355029 38355074 -65139900 + (T)n Simple_repeat Simple_repeat 1 45 0 9 877 878 25 195 8 chr15 38355078 38355201 -65139773 - B1_Mus2 SINE Alu 0 147 2 9 877 2105 196 71 43 chr15 38355208 38355623 -65139351 - MYSERV16_I-int LTR ERVK -1529 797 356 9 877 1042 45 245 7 chr15 38355623 38355778 -65139196 - B2_Mm2 SINE B2 -3 192 1 9 877 2105 196 71 43 chr15 38355778 38355869 -65139105 - MYSERV16_I-int LTR ERVK -1971 355 277 9 877 715 179 74 35 chr15 38355868 38356104 -65138870 - MYSERV16_I-int LTR ERVK -2168 158 1 9 877 658 263 16 66 chr15 38357090 38357273 -65137701 - RLTR20D LTR ERVK 0 568 395 9 877 484 245 107 87 chr15 38357260 38357517 -65137457 - RLTR20D LTR ERVK -314 254 11 9 877 516 264 138 18 chr15 38357684 38357908 -65137066 + LTR33 LTR ERVL 4 254 -261 9 877 21 36 0 0 chr15 38358025 38358053 -65136921 + AT_rich Low_complexity Low_complexity 1 28 0 9 877 444 259 31 87 chr15 38358056 38358077 -65136897 + ID_B1 SINE B4 65 140 -84 9 877 793 150 0 85 chr15 38358077 38358132 -65136842 + B1_Mur3 SINE Alu 10 59 -90 9 877 2276 188 128 59 chr15 38358132 38358704 -65136270 + RMER19C LTR ERVK 1 611 0 9 877 444 259 31 87 chr15 38358704 38358788 -65136186 + ID_B1 SINE B4 141 216 -8 9 877 243 0 0 0 chr15 38358793 38358820 -65136154 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 877 284 291 79 43 chr15 38359241 38359381 -65135593 - YREP_Mm Unknown Unknown -1450 362 218 9 877 627 270 7 7 chr15 38359282 38359420 -65135554 + ID_B1 SINE B4 83 220 -4 9 877 237 309 58 102 chr15 38359588 38359725 -65135249 + MIRb SINE MIR 116 246 -22 9 877 300 309 71 24 chr15 38360020 38360109 -65134865 - L1MDa LINE L1 -4104 2529 2434 9 877 937 139 35 0 chr15 38360109 38360253 -65134721 - B1_Mur3 SINE Alu 0 149 1 9 877 300 309 71 24 chr15 38360253 38360289 -65134685 - L1MDa LINE L1 -4200 2433 2398 9 877 629 168 101 0 chr15 38360295 38360414 -65134560 - B1_Mur2 SINE Alu -1 148 18 9 877 515 274 89 30 chr15 38360431 38360634 -65134340 - B3 SINE B2 0 216 2 9 877 544 255 49 56 chr15 38360674 38360836 -65134138 - RSINE1 SINE B4 -2 163 3 9 877 839 125 32 89 chr15 38361182 38361340 -65133634 - B1_Mur4 SINE Alu 0 150 2 9 877 977 284 183 26 chr15 38361983 38362608 -65132366 + Lx8 LINE L1 6577 7299 -174 9 877 221 326 70 0 chr15 38362771 38362857 -65132117 + L2a LINE L2 3299 3390 -36 9 877 459 251 43 18 chr15 38363001 38363206 -65131768 + L1M4 LINE L1 5475 5695 -479 9 877 414 238 65 58 chr15 38363216 38363354 -65131620 + RSINE1 SINE B4 27 165 0 9 877 1884 128 15 61 chr15 38363406 38363748 -65131226 - RLTR9A LTR ERVK 0 368 43 9 877 607 227 84 176 chr15 38364022 38364380 -65130594 - ETnERV2-int LTR ERVK -985 6421 6097 9 877 1736 94 0 32 chr15 38364388 38364640 -65130334 - RMER16-int LTR ERVK -1230 4176 3933 9 877 2360 112 44 93 chr15 38364640 38365162 -65129812 - RLTR1B LTR ERV1 0 512 1 9 877 2280 124 38 14 chr15 38365162 38365531 -65129443 - RMER16-int LTR ERVK -1470 3936 3559 9 877 7916 166 27 45 chr15 38365515 38366926 -65128048 - ETnERV2-int LTR ERVK -3338 4068 2684 9 877 1169 69 0 14 chr15 38366926 38367073 -65127901 - B1_Mus1 SINE Alu -2 146 2 9 877 7916 192 16 139 chr15 38367073 38367274 -65127700 - ETnERV2-int LTR ERVK -4723 2683 2611 9 877 262 79 0 26 chr15 38367274 38367313 -65127661 - B3A SINE B2 -160 38 1 9 877 7916 192 16 139 chr15 38367313 38367665 -65127309 - ETnERV2-int LTR ERVK -4723 2610 2484 9 877 1961 162 118 86 chr15 38367665 38368097 -65126877 + RLTR41 LTR ERV1 1 446 0 9 877 385 325 19 14 chr15 38368588 38368800 -65126174 + MURVY-int LTR ERV1 582 794 -6807 9 877 479 319 73 35 chr15 38369159 38369628 -65125346 + MURVY-int LTR ERV1 1292 1776 -5676 9 877 376 316 73 82 chr15 38369629 38369984 -65124990 + MURVY-int LTR ERV1 2457 2808 -4798 9 877 1135 341 61 25 chr15 38370070 38370663 -65124311 + MuRRS4-int LTR ERV1 2092 2705 -2358 9 877 1609 275 38 59 chr15 38371156 38371614 -65123360 + MuRRS4-int LTR ERV1 3536 3992 -1071 9 877 1152 75 0 7 chr15 38371614 38371625 -65123349 - B1_Mus1 SINE Alu 0 148 138 9 877 209 33 0 32 chr15 38371625 38371656 -65123318 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 9 877 1152 75 0 7 chr15 38371656 38371792 -65123182 - B1_Mus1 SINE Alu -11 137 2 9 877 1609 320 41 35 chr15 38371792 38372112 -65122862 + MuRRS4-int LTR ERV1 3993 4020 -1043 9 877 513 294 39 25 chr15 38372643 38372896 -65122078 + MURVY-int LTR ERV1 7139 7515 -91 9 877 1973 206 65 32 chr15 38372996 38373428 -65121546 + RLTR41 LTR ERV1 1 446 0 9 877 6086 127 36 55 chr15 38373428 38374575 -65120399 - ETnERV2-int LTR ERVK -5225 2181 1057 9 877 387 0 0 0 chr15 38374627 38374670 -65120304 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 9 877 385 253 89 89 chr15 38374670 38374952 -65120022 - ETnERV2-int LTR ERVK -3001 313 32 9 877 2013 97 43 64 chr15 38374978 38375354 -65119620 - RLTR9A LTR ERVK 0 368 1 9 877 836 273 147 15 chr15 38375404 38375548 -65119426 + L1MB5 LINE L1 5699 5863 -311 9 877 1524 37 0 0 chr15 38375548 38375736 -65119238 + L1Md_F2 LINE L1 6394 6581 -1 9 877 836 273 147 15 chr15 38375736 38375992 -65118982 + L1MB5 LINE L1 5864 6152 -22 9 877 874 226 42 10 chr15 38376023 38376215 -65118759 - B3A SINE B2 0 198 1 9 877 797 236 70 30 chr15 38376691 38376892 -65118082 - MTEb LTR MaLR -1 378 170 9 877 207 0 0 0 chr15 38376910 38376933 -65118041 + (TG)n Simple_repeat Simple_repeat 2 24 0 9 877 22 0 0 0 chr15 38377457 38377479 -65117495 + AT_rich Low_complexity Low_complexity 1 22 0 9 877 417 292 60 46 chr15 38377482 38377633 -65117341 - RSINE1 SINE B4 -2 163 11 9 877 393 22 0 0 chr15 38377781 38377827 -65117147 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 877 755 243 0 0 chr15 38377835 38377983 -65116991 + B1_Mur1 SINE Alu 2 149 0 9 877 840 244 24 5 chr15 38377988 38378194 -65116780 - B3 SINE B2 -6 210 1 9 877 759 11 0 0 chr15 38378740 38378828 -65116146 + (TG)n Simple_repeat Simple_repeat 2 89 0 9 877 393 233 288 3 chr15 38378828 38378977 -65115997 - B4 SINE B4 -23 269 86 9 877 391 322 41 20 chr15 38379075 38379221 -65115753 + RSINE1 SINE B4 17 165 0 9 877 369 130 57 40 chr15 38379249 38379425 -65115549 + (CA)n Simple_repeat Simple_repeat 1 179 0 9 877 434 248 68 23 chr15 38379489 38379621 -65115353 + RSINE1 SINE B4 12 149 -16 9 877 250 208 66 53 chr15 38379625 38379701 -65115273 + PB1D7 SINE Alu 44 120 0 9 877 249 277 165 16 chr15 38379740 38379861 -65115113 + MLT1B LTR MaLR 233 371 -19 9 877 537 258 237 9 chr15 38379877 38380200 -65114774 - MTD LTR MaLR -20 399 5 9 877 351 274 47 0 chr15 38380255 38380361 -65114613 - MLT1D LTR MaLR -1 504 394 9 877 286 312 58 87 chr15 38380387 38380594 -65114380 - MLT1D LTR MaLR -270 235 35 9 877 280 253 131 12 chr15 38380974 38381058 -65113916 - MIRb SINE MIR -140 128 35 9 877 200 313 0 78 chr15 38381323 38381413 -65113561 + C-rich Low_complexity Low_complexity 1 83 0 9 877 321 82 0 0 chr15 38382504 38382553 -65112421 + (TC)n Simple_repeat Simple_repeat 2 50 0 9 877 363 308 75 31 chr15 38383149 38383310 -65111664 + MER53 DNA hAT 1 168 -25 9 877 223 299 81 20 chr15 38383659 38383758 -65111216 - PB1 SINE Alu -21 106 2 9 877 181 299 14 43 chr15 38384528 38384598 -65110376 + MIR3 SINE MIR 92 159 -49 9 877 380 308 72 62 chr15 38384904 38385112 -65109862 + MLT1N2 LTR MaLR 1 210 -352 9 877 1061 111 0 0 chr15 38385317 38385461 -65109513 - B1_Mus1 SINE Alu 0 148 5 9 877 845 168 7 27 chr15 38385488 38385635 -65109339 + B1_Mus2 SINE Alu 4 147 0 9 877 618 113 0 0 chr15 38385644 38385741 -65109233 + (GA)n Simple_repeat Simple_repeat 1 97 0 9 877 345 245 125 30 chr15 38385741 38385909 -65109065 + MLT1N2 LTR MaLR 171 354 -113 9 877 1334 165 14 0 chr15 38386079 38386291 -65108683 + B3 SINE B2 1 215 -1 9 877 30 0 0 0 chr15 38387612 38387642 -65107332 + AT_rich Low_complexity Low_complexity 1 30 0 9 877 348 210 28 48 chr15 38388514 38388621 -65106353 + PB1D10 SINE Alu 17 116 -1 9 877 277 252 17 44 chr15 38388629 38388730 -65106244 + B4 SINE B4 1 104 -61 9 877 418 262 16 16 chr15 38388748 38388876 -65106098 - HAL1-2a_MD LINE L1 -533 2491 2364 9 877 458 275 34 40 chr15 38388876 38389024 -65105950 + B1F1 SINE Alu 1 147 -2 9 877 231 224 30 0 chr15 38389184 38389251 -65105723 + BC1_Mm scRNA scRNA 15 83 -69 9 877 442 268 88 104 chr15 38389684 38389934 -65105040 - B4A SINE B4 -14 278 33 9 877 463 237 22 58 chr15 38389987 38390126 -65104848 - B1F2 SINE Alu 0 149 16 9 877 297 281 116 0 chr15 38390148 38390180 -65104794 + ID SINE ID 43 88 -136 9 877 328 250 76 0 chr15 38390180 38390272 -65104702 + PB1D10 SINE Alu 1 99 -18 9 877 423 0 0 0 chr15 38390914 38390961 -65104013 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 9 877 487 254 162 23 chr15 38390961 38391134 -65103840 - ID_B1 SINE B4 -11 213 17 9 877 1311 111 21 5 chr15 38391911 38392101 -65102873 - B2_Mm2 SINE B2 -1 194 2 1 877 2532 99 112 23 chr15 38392180 38392616 -65102358 - IAPLTR2_Mm LTR ERVK 0 475 1 1 877 6328 35 4 12 chr15 38392616 38393368 -65101606 - IAPEz-int LTR ERVK 0 6481 5736 1 877 2261 68 0 0 chr15 38393367 38393645 -65101329 - IAPEz-int LTR ERVK -4845 1636 1359 1 877 4635 70 23 47 chr15 38393645 38394306 -65100668 - IAPEz-int LTR ERVK -5819 662 18 1 877 270 120 100 0 chr15 38394289 38394339 -65100635 - IAPEz-int LTR ERVK -1930 57 3 1 877 2502 96 138 7 chr15 38394341 38394761 -65100213 - IAPLTR2_Mm LTR ERVK 0 475 1 1 877 2721 161 167 8 chr15 38394807 38395334 -65099640 + RMER19C LTR ERVK 1 611 0 1 877 275 271 0 0 chr15 38395354 38395413 -65099561 + tRNA-Ala-GCY_ tRNA tRNA 12 70 -5 1 877 529 245 111 7 chr15 38395430 38395574 -65099400 + MTE2b LTR MaLR 98 256 -123 1 877 268 254 0 0 chr15 38395552 38395619 -65099355 + MTE2b LTR MaLR 190 256 -123 1 877 549 222 78 0 chr15 38395595 38395748 -65099226 + MTEb LTR MaLR 185 349 -30 1 877 533 154 82 89 chr15 38395763 38395898 -65099076 - B1_Mur3 SINE Alu -6 143 10 1 877 344 265 65 98 chr15 38395898 38395945 -65099029 - B4A SINE B4 -69 221 46 1 877 843 175 19 7 chr15 38395989 38396144 -65098830 + B3 SINE B2 1 157 -59 1 877 429 141 0 0 chr15 38396181 38396252 -65098722 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 877 516 305 148 105 chr15 38396511 38396958 -65098016 + MER21B LTR ERV1 335 800 -63 1 877 589 233 189 0 chr15 38397034 38397214 -65097760 + B3 SINE B2 3 216 0 1 877 1203 41 14 0 chr15 38397479 38397624 -65097350 - B1_Mus1 SINE Alu 0 148 2 1 877 204 135 0 0 chr15 38397739 38397776 -65097198 + (TAA)n Simple_repeat Simple_repeat 2 38 0 1 877 417 70 0 0 chr15 38398717 38398774 -65096200 + (GGA)n Simple_repeat Simple_repeat 3 59 0 1 877 423 0 0 0 chr15 38399635 38399682 -65095292 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 877 24 32 0 0 chr15 38402974 38403005 -65091969 + GC_rich Low_complexity Low_complexity 1 31 0 1 877 22 35 0 0 chr15 38403602 38403631 -65091343 + GC_rich Low_complexity Low_complexity 1 29 0 1 877 26 30 0 0 chr15 38403648 38403681 -65091293 + GC_rich Low_complexity Low_complexity 1 33 0 1 877 446 150 69 10 chr15 38403886 38403987 -65090987 - PB1D10 SINE Alu 0 117 11 1 878 234 0 0 0 chr15 38404119 38404145 -65090829 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1 878 424 295 8 8 chr15 38404290 38404420 -65090554 - MER46C DNA MER2_type -111 227 98 1 878 400 277 82 28 chr15 38404816 38404998 -65089976 - RMER15-int LTR ERVL -669 4330 4139 1 878 437 323 103 8 chr15 38405052 38405286 -65089688 - RMER15-int LTR ERVL -2487 2512 2257 1 878 386 274 46 51 chr15 38405399 38405595 -65089379 + B3A SINE B2 3 197 -1 1 878 22 70 0 0 chr15 38405674 38405717 -65089257 + AT_rich Low_complexity Low_complexity 1 43 0 1 878 1641 259 79 43 chr15 38405932 38406461 -65088513 - RMER15-int LTR ERVL -3151 1848 1301 1 878 474 261 54 0 chr15 38406488 38406618 -65088356 - RSINE1 SINE B4 -22 143 7 1 878 731 265 124 55 chr15 38406634 38406797 -65088177 - RMER15-int LTR ERVL -3705 1294 1133 1 878 1333 224 108 9 chr15 38406797 38407130 -65087844 - ORR1D2 LTR MaLR 0 370 5 1 878 731 265 124 55 chr15 38407130 38407313 -65087661 - RMER15-int LTR ERVL -3867 1132 924 1 878 369 0 0 0 chr15 38407418 38407459 -65087515 + (TAAAA)n Simple_repeat Simple_repeat 4 44 0 1 878 326 254 28 0 chr15 38407563 38407634 -65087340 - RMER15-int LTR ERVL -4237 762 690 1 878 458 311 49 61 chr15 38407634 38407898 -65087076 - RMER15-int LTR ERVL -4529 470 210 1 878 2866 21 0 45 chr15 38408547 38408900 -65086074 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 878 21704 37 32 14 chr15 38408900 38411522 -65083452 + IAPEz-int LTR ERVK 8 2674 -3807 1 878 9654 23 3 0 chr15 38411497 38412576 -65082398 + IAPEz-int LTR ERVK 5400 6481 0 1 878 2866 21 0 45 chr15 38412576 38412929 -65082045 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 878 694 59 29 10 chr15 38413278 38413380 -65081594 - MT2C_Mm LTR ERVL 0 475 372 1 878 1440 185 114 0 chr15 38413662 38413986 -65080988 + ORR1D1 LTR MaLR 14 374 0 1 878 315 333 193 0 chr15 38414191 38414362 -65080612 - ID_B1 SINE B4 -20 204 1 1 878 379 288 19 9 chr15 38414721 38414826 -65080148 + PB1 SINE Alu 15 120 -7 1 878 492 196 31 0 chr15 38414840 38414937 -65080037 - PB1D9 SINE Alu -8 112 13 1 878 549 173 154 0 chr15 38415526 38415636 -65079338 - B1_Mus2 SINE Alu -20 127 1 1 878 473 101 0 71 chr15 38415929 38416014 -65078960 - B1_Mus2 SINE Alu 0 147 69 1 878 218 217 167 12 chr15 38417068 38417152 -65077822 + B1F SINE Alu 23 119 -30 1 878 216 86 0 0 chr15 38417737 38417772 -65077202 + (A)n Simple_repeat Simple_repeat 1 35 0 1 878 217 296 72 24 chr15 38420349 38420432 -65074542 + B4 SINE B4 1 87 -205 1 878 405 260 84 58 chr15 38420622 38420777 -65074197 - B4A SINE B4 -5 287 129 1 878 235 212 63 97 chr15 38420909 38421055 -65073919 + B1_Mur2 SINE Alu 5 147 -2 1 878 306 273 218 8 chr15 38421803 38421936 -65073038 - RSINE1 SINE B4 0 165 5 1 878 409 244 39 31 chr15 38422209 38422336 -65072638 + L1MC4 LINE L1 6778 6905 -1137 1 878 528 241 73 50 chr15 38422478 38422657 -65072317 + B3A SINE B2 1 183 -15 1 878 28 0 0 0 chr15 38423551 38423579 -65071395 + AT_rich Low_complexity Low_complexity 1 28 0 1 878 213 338 59 0 chr15 38423760 38423828 -65071146 + ID4 SINE ID 2 73 -10 1 878 210 128 0 0 chr15 38424244 38424283 -65070691 + (T)n Simple_repeat Simple_repeat 1 39 0 1 878 517 155 62 18 chr15 38424571 38424683 -65070291 + PB1D9 SINE Alu 1 117 -3 1 878 561 208 250 23 chr15 38424733 38424905 -65070069 + B3 SINE B2 2 212 -4 1 878 1273 21 0 0 chr15 38425249 38425393 -65069581 + B1_Mm SINE Alu 4 147 0 1 878 1002 253 139 10 chr15 38425517 38425820 -65069154 + MTD LTR MaLR 22 363 -56 1 878 859 149 45 0 chr15 38426012 38426166 -65068808 - B2_Mm2 SINE B2 -34 161 1 1 878 462 61 0 0 chr15 38426199 38426265 -65068709 + (GGAA)n Simple_repeat Simple_repeat 1 66 0 1 878 375 255 77 19 chr15 38426293 38426397 -65068577 - PB1D10 SINE Alu -7 110 1 1 878 512 200 35 26 chr15 38426829 38426942 -65068032 + B1_Mur1 SINE Alu 36 149 0 1 878 1214 48 0 0 chr15 38427530 38427676 -65067298 + B1_Mus2 SINE Alu 2 147 0 1 878 848 164 122 0 chr15 38427899 38428088 -65066886 - URR1B DNA MER1_type -7 218 7 1 878 382 289 66 13 chr15 38428818 38428969 -65066005 + RSINE1 SINE B4 3 161 -4 1 878 414 0 0 0 chr15 38429000 38429046 -65065928 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 878 342 211 260 32 chr15 38429046 38429197 -65065777 - B3A SINE B2 -35 181 2 1 878 510 256 119 71 chr15 38429266 38429476 -65065498 + ID_B1 SINE B4 2 221 -3 1 878 316 281 45 0 chr15 38429521 38429610 -65065364 - ID_B1 SINE B4 -28 196 104 1 878 548 297 25 25 chr15 38429621 38429821 -65065153 + B3 SINE B2 13 212 -4 1 878 1215 104 50 0 chr15 38430448 38430630 -65064344 + B2_Mm2 SINE B2 3 193 -2 1 878 474 309 146 27 chr15 38431527 38431786 -65063188 + B4A SINE B4 1 290 -2 1 878 1225 42 0 0 chr15 38431901 38432045 -65062929 + B1_Mm SINE Alu 1 144 -3 1 878 221 40 100 0 chr15 38432047 38432097 -65062877 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 1 878 241 224 35 0 chr15 38432199 38432257 -65062717 + B1_Mur4 SINE Alu 90 149 -1 1 878 1488 59 37 0 chr15 38432274 38432461 -65062513 + B2_Mm2 SINE B2 1 194 -1 1 878 255 170 0 0 chr15 38433569 38433616 -65061358 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 878 222 191 24 0 chr15 38433623 38433665 -65061309 + B3A SINE B2 3 45 -153 1 878 332 252 195 53 chr15 38433665 38433778 -65061196 + B1_Mus2 SINE Alu 1 129 -18 1 878 460 301 73 27 chr15 38433797 38433947 -65061027 + B3 SINE B2 48 204 -12 1 878 284 330 26 26 chr15 38434671 38434786 -65060188 + PB1D9 SINE Alu 6 120 0 1 878 485 270 31 62 chr15 38435158 38435320 -65059654 + ID_B1 SINE B4 45 201 -23 1 878 225 0 0 0 chr15 38435326 38435351 -65059623 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 878 276 30 0 0 chr15 38435373 38435406 -65059568 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 878 460 284 165 0 chr15 38435627 38435803 -65059171 + ID_B1 SINE B4 8 212 -12 1 878 443 278 34 34 chr15 38435990 38436109 -65058865 - RSINE1 SINE B4 -35 130 12 1 878 563 219 42 0 chr15 38436195 38436314 -65058660 + B1_Mm SINE Alu 3 126 -21 1 878 250 264 20 71 chr15 38436475 38436573 -65058401 + B1F1 SINE Alu 5 97 -52 1 878 377 214 67 26 chr15 38437849 38437945 -65057029 + B1_Mur2 SINE Alu 10 105 -12 1 878 559 327 12 18 chr15 38437947 38438118 -65056856 - B3A SINE B2 -16 182 13 1 878 536 318 0 72 chr15 38438150 38438357 -65056617 - B3A SINE B2 -6 192 1 1 878 427 208 134 30 chr15 38438746 38438880 -65056094 + B1_Mur3 SINE Alu 1 148 -1 1 878 251 376 32 21 chr15 38438921 38439016 -65055958 - RSINE1 SINE B4 -10 155 60 1 878 1257 34 0 0 chr15 38439122 38439269 -65055705 + B1_Mus1 SINE Alu 2 148 0 1 878 396 0 0 0 chr15 38439482 38439526 -65055448 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 878 624 190 50 0 chr15 38439533 38439654 -65055320 - B1_Mur1 SINE Alu -18 131 5 1 878 243 250 16 48 chr15 38439599 38439662 -65055312 - B4A SINE B4 -147 145 85 1 878 423 0 0 0 chr15 38439708 38439755 -65055219 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 878 227 269 39 0 chr15 38439854 38439906 -65055068 - Lx8 LINE L1 -346 7127 7074 1 878 351 243 0 14 chr15 38440138 38440209 -65054765 + B1F2 SINE Alu 52 121 -28 1 878 234 261 120 0 chr15 38440292 38440380 -65054594 + PB1D7 SINE Alu 10 107 -13 1 878 241 133 21 43 chr15 38440905 38440952 -65054022 + RSINE1 SINE B4 75 120 -45 1 878 594 179 0 57 chr15 38441139 38441263 -65053711 + B1_Mur1 SINE Alu 2 118 -31 1 878 485 176 0 0 chr15 38441808 38441893 -65053081 - B1_Mus1 SINE Alu -63 85 1 1 878 361 282 36 64 chr15 38442094 38442234 -65052740 - B4A SINE B4 0 292 157 1 878 270 268 11 23 chr15 38442274 38442362 -65052612 + B1_Mur1 SINE Alu 62 148 -1 1 878 475 278 15 8 chr15 38442716 38442850 -65052124 + RSINE1 SINE B4 2 136 -29 1 878 1141 106 6 0 chr15 38443060 38443230 -65051744 + B2_Mm1t SINE B2 1 171 -22 1 878 313 109 350 29 chr15 38443277 38443380 -65051594 + B2_Mm2 SINE B2 47 182 -13 1 878 309 51 0 0 chr15 38443460 38443499 -65051475 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 1 878 1368 81 38 0 chr15 38443599 38443784 -65051190 + B2_Mm1t SINE B2 1 192 -1 1 878 477 262 205 12 chr15 38443791 38443982 -65050992 - B3A SINE B2 0 216 2 1 878 403 235 102 0 chr15 38444489 38444587 -65050387 + PB1D10 SINE Alu 10 117 0 1 878 207 0 0 0 chr15 38444590 38444613 -65050361 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1 878 368 325 30 67 chr15 38444679 38444844 -65050130 + ID_B1 SINE B4 64 222 -2 1 878 487 293 0 8 chr15 38445299 38445416 -65049558 + ID_B1 SINE B4 104 219 -5 1 878 210 275 114 14 chr15 38445467 38445537 -65049437 - ID4_ SINE ID -1 82 6 1 878 825 108 131 0 chr15 38445598 38445728 -65049246 + B1_Mus1 SINE Alu 2 148 0 1 878 607 237 65 0 chr15 38446123 38446262 -65048712 + B1_Mus1 SINE Alu 1 148 0 1 878 182 118 29 0 chr15 38446267 38446301 -65048673 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 1 878 450 240 102 132 chr15 38446355 38446552 -65048422 - ID_B1 SINE B4 -13 211 21 1 878 248 267 80 0 chr15 38446492 38446567 -65048407 - ID4 SINE ID -2 81 1 1 878 545 159 103 0 chr15 38446670 38446777 -65048197 - PB1D9 SINE Alu -1 119 2 1 878 21 0 0 0 chr15 38446913 38446934 -65048040 + AT_rich Low_complexity Low_complexity 1 21 0 1 878 332 218 92 0 chr15 38447171 38447258 -65047716 + PB1D10 SINE Alu 21 115 -2 1 878 22 0 0 0 chr15 38448508 38448530 -65046444 + GC_rich Low_complexity Low_complexity 1 22 0 1 878 502 228 64 35 chr15 38449863 38450004 -65044970 - B1_Mus2 SINE Alu 0 147 3 1 878 1255 28 0 0 chr15 38450046 38450187 -65044787 - B1_Mus1 SINE Alu -6 142 2 1 878 596 194 110 15 chr15 38450287 38450423 -65044551 + B1_Mur2 SINE Alu 1 149 0 1 878 306 333 43 0 chr15 38450512 38450605 -65044369 - PB1D7 SINE Alu -13 107 11 1 878 333 318 45 9 chr15 38450899 38451010 -65043964 - PB1D10 SINE Alu 0 117 3 1 878 366 227 103 0 chr15 38451522 38451619 -65043355 - PB1D10 SINE Alu -4 113 7 1 878 216 261 105 74 chr15 38451540 38451635 -65043339 - ID_B1 SINE B4 -48 176 79 1 878 293 286 0 0 chr15 38451700 38451763 -65043211 + B4A SINE B4 81 143 -149 1 878 386 167 176 59 chr15 38451711 38451797 -65043177 + PB1D9 SINE Alu 7 108 -12 1 878 1094 90 14 7 chr15 38451797 38451943 -65043031 + B1_Mus2 SINE Alu 1 147 0 1 878 386 167 176 59 chr15 38451943 38451958 -65043016 + PB1D9 SINE Alu 109 120 0 1 878 383 66 16 0 chr15 38451966 38451996 -65042978 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 1 878 1246 28 7 0 chr15 38451996 38452141 -65042833 + B1_Mus2 SINE Alu 2 147 0 1 878 383 66 16 0 chr15 38452141 38452171 -65042803 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 1 878 287 342 86 40 chr15 38452234 38452386 -65042588 + ID_B1 SINE B4 66 224 0 1 878 1140 82 7 0 chr15 38453137 38453283 -65041691 + B1_Mus1 SINE Alu 1 147 -1 1 878 267 262 99 60 chr15 38453423 38453577 -65041397 + MLT1A0 LTR MaLR 42 193 -215 1 878 250 236 18 35 chr15 38453669 38453726 -65041248 + PB1D10 SINE Alu 47 102 -15 1 878 456 295 18 142 chr15 38453860 38454085 -65040889 + ID_B1 SINE B4 12 208 -16 1 878 281 304 58 0 chr15 38454120 38454189 -65040785 + RSINE1 SINE B4 93 165 0 1 878 452 290 40 0 chr15 38455116 38455240 -65039734 + RSINE1 SINE B4 8 136 -29 1 878 274 270 16 0 chr15 38455273 38455336 -65039638 + ID SINE ID 10 73 -151 1 878 970 230 14 24 chr15 38455436 38455645 -65039329 + B3 SINE B2 2 208 -8 1 878 669 169 76 8 chr15 38455683 38455814 -65039160 + B1_Mur3 SINE Alu 1 140 -9 1 878 492 99 0 0 chr15 38455814 38455885 -65039089 + (CAG)n Simple_repeat Simple_repeat 1 71 0 1 878 4039 83 33 11 chr15 38456034 38456604 -65038370 - MT2B2 LTR ERVL 0 584 2 1 878 390 21 0 0 chr15 38456604 38456651 -65038323 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 878 2353 135 23 18 chr15 38456669 38457061 -65037913 + ORR1B1 LTR MaLR 1 394 0 1 878 2346 281 49 115 chr15 38457220 38457946 -65037028 - ORR1D2-int LTR MaLR -533 1047 351 1 878 1109 89 0 0 chr15 38457946 38458092 -65036882 + B1_Mus1 SINE Alu 3 148 0 1 878 2346 204 29 77 chr15 38458092 38458430 -65036544 - ORR1D2-int LTR MaLR -1202 378 61 1 878 591 85 0 0 chr15 38458443 38458525 -65036449 + (GA)n Simple_repeat Simple_repeat 1 82 0 1 878 1417 199 97 6 chr15 38458588 38458678 -65036296 - ORR1D2 LTR MaLR -11 359 260 1 878 288 0 0 0 chr15 38458678 38458710 -65036264 + (CACAT)n Simple_repeat Simple_repeat 3 34 0 1 878 1417 199 97 6 chr15 38458710 38458948 -65036026 - ORR1D2 LTR MaLR -111 259 2 1 878 1383 63 6 0 chr15 38459084 38459258 -65035716 + B2_Mm1a SINE B2 1 175 -18 1 878 22 0 0 0 chr15 38459334 38459356 -65035618 + AT_rich Low_complexity Low_complexity 1 22 0 1 878 591 180 156 0 chr15 38460134 38460262 -65034712 + B1_Mur4 SINE Alu 3 150 0 1 878 359 278 78 62 chr15 38460468 38460663 -65034311 + B3A SINE B2 11 206 -10 1 878 1186 126 11 5 chr15 38460663 38460854 -65034120 + B2_Mm1a SINE B2 2 193 0 1 878 351 221 45 23 chr15 38460884 38460972 -65034002 + B4A SINE B4 2 91 -201 1 878 463 219 244 0 chr15 38460975 38461094 -65033880 + B1F2 SINE Alu 1 148 -1 1 878 306 0 0 0 chr15 38461327 38461361 -65033613 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 878 405 0 0 0 chr15 38461430 38461475 -65033499 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 878 306 0 0 0 chr15 38461475 38461508 -65033466 + (GA)n Simple_repeat Simple_repeat 1 34 0 1 878 210 71 0 0 chr15 38461565 38461593 -65033381 + (T)n Simple_repeat Simple_repeat 1 28 0 1 878 2207 97 15 48 chr15 38461599 38461651 -65033323 - ORR1A2 LTR MaLR -1 326 283 1 878 1296 98 5 49 chr15 38461651 38461854 -65033120 - B2_Mm2 SINE B2 0 195 2 1 878 2207 97 15 48 chr15 38461854 38462138 -65032836 - ORR1A2 LTR MaLR -45 282 1 1 878 265 171 0 0 chr15 38462264 38462305 -65032669 - RSINE1 SINE B4 -45 120 80 1 878 609 170 125 0 chr15 38462337 38462449 -65032525 + B3 SINE B2 1 126 -90 1 878 1071 83 0 27 chr15 38463088 38463237 -65031737 - B1_Mus2 SINE Alu 0 147 3 1 878 247 264 42 0 chr15 38463423 38463495 -65031479 + L1M2 LINE L1 4639 4713 -1430 1 878 822 48 0 0 chr15 38463558 38463661 -65031313 + (TG)n Simple_repeat Simple_repeat 2 104 0 1 878 835 287 28 34 chr15 38463714 38464039 -65030935 + RLTR15 LTR ERVK 1 323 -36 1 878 570 203 220 0 chr15 38464067 38464226 -65030748 + B3 SINE B2 22 215 -1 1 878 1225 54 0 0 chr15 38464346 38464493 -65030481 - B1_Mus2 SINE Alu 0 147 1 1 878 530 295 56 107 chr15 38464541 38464673 -65030301 - B4 SINE B4 -87 205 82 1 878 482 245 200 6 chr15 38464673 38464833 -65030141 - B3A SINE B2 -6 192 2 1 878 530 295 56 107 chr15 38464833 38464845 -65030129 - B4 SINE B4 -211 81 81 1 878 1158 47 0 0 chr15 38464845 38464994 -65029980 + (TCTA)n Simple_repeat Simple_repeat 1 149 0 1 878 530 295 56 107 chr15 38464994 38465064 -65029910 - B4 SINE B4 -212 80 1 1 878 258 56 0 0 chr15 38465815 38465851 -65029123 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 1 878 288 250 65 43 chr15 38465851 38465934 -65029040 - PB1D10 SINE Alu -8 109 23 1 878 237 259 14 21 chr15 38465994 38466136 -65028838 + CT-rich Low_complexity Low_complexity 5 145 0 1 878 703 257 7 7 chr15 38466137 38466294 -65028680 - ID_B1 SINE B4 -49 243 83 1 878 921 234 39 0 chr15 38466338 38466543 -65028431 + B3 SINE B2 1 213 -3 1 878 429 20 0 0 chr15 38467594 38467644 -65027330 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 878 348 283 10 52 chr15 38467648 38467745 -65027229 + RSINE1 SINE B4 73 165 0 1 878 595 248 15 15 chr15 38467795 38467930 -65027044 + B1F1 SINE Alu 2 136 -13 1 878 266 26 0 50 chr15 38467930 38467970 -65027004 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 1 878 235 356 160 6 chr15 38468719 38468894 -65026080 - MIR SINE MIR -31 231 30 1 878 425 304 17 0 chr15 38468897 38469012 -65025962 + ID_B1 SINE B4 108 224 0 1 878 180 0 0 0 chr15 38469022 38469042 -65025932 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 878 190 296 69 30 chr15 38469118 38469219 -65025755 + MIRb SINE MIR 141 245 -23 1 878 698 142 33 16 chr15 38469659 38469781 -65025193 - B1_Mur4 SINE Alu -1 149 26 1 878 1245 96 0 0 chr15 38469781 38469959 -65025015 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1 878 195 42 0 0 chr15 38469959 38469983 -65024991 + (TTTC)n Simple_repeat Simple_repeat 3 26 0 1 878 417 70 0 0 chr15 38470097 38470154 -65024820 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 878 856 232 93 22 chr15 38470892 38471103 -65023871 + B4A SINE B4 50 278 -14 1 878 1455 33 0 3 chr15 38471103 38471464 -65023510 + (CA)n Simple_repeat Simple_repeat 1 359 0 1 878 856 232 93 22 chr15 38471464 38471476 -65023498 + B4A SINE B4 279 289 -3 1 878 214 308 64 0 chr15 38471605 38471683 -65023291 + ID4_ SINE ID 1 83 0 1 878 216 0 0 0 chr15 38472439 38472463 -65022511 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 878 235 311 122 25 chr15 38472714 38472916 -65022058 - MIR SINE MIR -36 232 3 1 878 254 348 45 46 chr15 38473533 38473695 -65021279 - MIR SINE MIR -11 251 95 1 878 360 0 0 0 chr15 38474444 38474484 -65020490 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 878 403 209 126 109 chr15 38474887 38475070 -65019904 - B2_Mm2 SINE B2 -9 186 1 1 878 385 247 20 10 chr15 38475105 38475203 -65019771 - PB1D10 SINE Alu -18 99 1 1 878 446 329 90 45 chr15 38475300 38475456 -65019518 + RSINE1 SINE B4 3 165 0 1 878 220 165 274 105 chr15 38475565 38475660 -65019314 + B3 SINE B2 7 117 -99 1 878 610 304 70 47 chr15 38475584 38475798 -65019176 + B4A SINE B4 52 270 -22 1 878 929 266 10 10 chr15 38475800 38476005 -65018969 + ID_B1 SINE B4 17 221 -3 1 878 22 0 0 0 chr15 38476054 38476076 -65018898 + AT_rich Low_complexity Low_complexity 1 22 0 1 878 387 264 0 0 chr15 38476094 38476234 -65018740 + (TG)n Simple_repeat Simple_repeat 1 140 0 1 878 4355 179 157 46 chr15 38476278 38476910 -65018064 + RLTR25A LTR ERVK 1 645 -458 1 878 1189 62 7 0 chr15 38476910 38477056 -65017918 + B1_Mus1 SINE Alu 2 148 0 1 878 279 0 0 0 chr15 38477063 38477094 -65017880 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 878 4355 179 157 46 chr15 38477094 38477446 -65017528 + RLTR25A LTR ERVK 646 1103 0 1 878 1168 63 0 0 chr15 38477533 38477675 -65017299 + B1_Mus1 SINE Alu 1 142 -6 1 878 186 156 0 0 chr15 38477677 38477722 -65017252 + A-rich Low_complexity Low_complexity 1 45 0 1 878 950 269 152 31 chr15 38477746 38478318 -65016656 + L1MB4 LINE L1 5385 6025 -155 1 878 478 281 53 14 chr15 38478447 38478627 -65016347 - B4A SINE B4 -3 289 102 1 878 219 36 0 0 chr15 38479046 38479074 -65015900 + (CAA)n Simple_repeat Simple_repeat 3 30 0 1 878 21 0 0 0 chr15 38479309 38479330 -65015644 + AT_rich Low_complexity Low_complexity 1 21 0 1 878 402 213 51 77 chr15 38479382 38479499 -65015475 + B1F1 SINE Alu 4 117 0 1 878 3406 40 2 0 chr15 38479621 38480016 -65014958 + MTA_Mm LTR MaLR 1 396 0 1 878 473 229 9 44 chr15 38480204 38480318 -65014656 - PB1D10 SINE Alu -7 110 1 1 878 489 290 131 44 chr15 38480377 38480514 -65014460 - RSINE1 SINE B4 -8 157 9 1 878 474 295 279 22 chr15 38480582 38480811 -65014163 - B4A SINE B4 -4 288 1 1 878 752 182 0 8 chr15 38480830 38480957 -65014017 - B3 SINE B2 -86 130 5 1 878 522 246 60 48 chr15 38481459 38481665 -65013309 - B3A SINE B2 0 216 9 1 878 314 210 65 19 chr15 38481819 38481914 -65013060 - PB1D7 SINE Alu -37 112 9 1 878 596 284 40 44 chr15 38481936 38482161 -65012813 - ID_B1 SINE B4 0 224 1 1 878 589 232 48 0 chr15 38482248 38482373 -65012601 + ID_B1 SINE B4 90 220 -4 1 878 336 230 11 65 chr15 38482402 38482495 -65012479 + PB1D10 SINE Alu 11 98 -19 1 878 327 243 86 0 chr15 38482531 38482601 -65012373 + B1F2 SINE Alu 34 109 -40 1 878 558 203 130 39 chr15 38482600 38482754 -65012220 + ORR1B1 LTR MaLR 41 208 -186 1 878 201 47 45 23 chr15 38482764 38482808 -65012166 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 1 878 1130 29 0 0 chr15 38482810 38482948 -65012026 - B1_Mm SINE Alu 0 147 10 1 878 489 264 11 16 chr15 38482938 38483071 -65011903 - B3 SINE B2 -48 168 30 1 878 283 324 27 44 chr15 38483173 38483283 -65011691 - B1F1 SINE Alu -3 114 10 1 878 1806 135 25 112 chr15 38483367 38483725 -65011249 + ORR1A4 LTR MaLR 3 329 0 1 878 327 253 190 31 chr15 38483740 38483773 -65011201 - B2_Mm2 SINE B2 -4 191 160 1 878 453 36 0 0 chr15 38483773 38483828 -65011146 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 878 426 287 217 0 chr15 38483828 38483957 -65011017 - B3A SINE B2 -39 159 3 1 878 810 202 132 5 chr15 38483982 38484171 -65010803 - B3 SINE B2 -3 213 1 1 878 755 268 13 25 chr15 38484335 38484511 -65010463 + ID_B1 SINE B4 48 222 -70 1 878 390 272 60 67 chr15 38484528 38484662 -65010312 + RSINE1 SINE B4 11 143 -22 1 878 348 83 0 0 chr15 38484668 38484716 -65010258 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 878 249 358 95 22 chr15 38484743 38484758 -65010216 + ID_B1 SINE B4 67 213 -11 1 878 350 311 131 0 chr15 38484758 38484880 -65010094 + B1F2 SINE Alu 1 138 -11 1 878 826 218 36 76 chr15 38484956 38485179 -65009795 + B3 SINE B2 3 216 0 1 878 182 339 17 0 chr15 38485646 38485705 -65009269 - MIRc SINE MIR -46 222 163 1 878 247 354 47 16 chr15 38486263 38486392 -65008582 + MIRb SINE MIR 136 268 0 1 878 261 180 0 0 chr15 38486412 38486462 -65008512 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 1 878 396 218 11 71 chr15 38486465 38486568 -65008406 - B1F SINE Alu -18 102 9 1 878 220 318 22 66 chr15 38486489 38486580 -65008394 - B4A SINE B4 -125 167 81 1 878 3452 122 58 38 chr15 38486632 38487359 -65007615 + L1VL4 LINE L1 319 1069 -2490 1 878 873 132 270 0 chr15 38487432 38487591 -65007383 + B3 SINE B2 1 202 -14 1 878 246 136 0 0 chr15 38487593 38487637 -65007337 + (CATA)n Simple_repeat Simple_repeat 1 44 0 1 878 424 267 38 0 chr15 38487695 38487800 -65007174 - ID_B1 SINE B4 0 224 116 1 878 23 0 0 0 chr15 38487829 38487852 -65007122 + AT_rich Low_complexity Low_complexity 1 23 0 1 878 257 327 43 80 chr15 38487893 38488056 -65006918 + RMER12 LTR ERVK 737 893 -429 1 878 798 246 25 44 chr15 38487925 38488129 -65006845 - B3 SINE B2 -14 202 3 1 878 570 333 36 36 chr15 38488141 38488418 -65006556 - L1MC1 LINE L1 -43 6290 6014 1 878 726 195 132 35 chr15 38488475 38488672 -65006302 - B3 SINE B2 0 216 1 1 878 405 0 0 0 chr15 38488861 38488906 -65006068 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 878 307 247 48 58 chr15 38488966 38489052 -65005922 - MER5B DNA MER1_type -31 147 63 1 878 1182 81 121 0 chr15 38489052 38489225 -65005749 - B2_Mm2 SINE B2 0 195 2 1 878 307 247 48 58 chr15 38489225 38489241 -65005733 - MER5B DNA MER1_type -116 62 47 1 878 519 305 39 13 chr15 38489297 38489453 -65005521 - RSINE1 SINE B4 0 165 6 1 878 410 216 78 23 chr15 38489490 38489618 -65005356 + B1_Mur2 SINE Alu 3 137 -12 1 878 264 0 0 135 chr15 38490036 38490147 -65004827 + (GGGAGA)n Simple_repeat Simple_repeat 6 101 0 1 878 701 222 0 0 chr15 38490865 38491009 -65003965 - B1F2 SINE Alu -1 148 5 1 878 238 170 0 41 chr15 38491024 38491073 -65003901 - ID_B1 SINE B4 -8 216 170 1 878 24 32 0 0 chr15 38491141 38491172 -65003802 + AT_rich Low_complexity Low_complexity 1 31 0 1 878 333 187 103 39 chr15 38491275 38491353 -65003621 - HAL1-3A_ME LINE L1 -801 2057 1975 1 878 243 250 0 0 chr15 38491372 38491488 -65003486 + (TG)n Simple_repeat Simple_repeat 2 117 0 1 878 245 351 43 51 chr15 38491524 38491641 -65003333 - Lx8 LINE L1 -180 7293 7178 1 878 717 181 63 0 chr15 38491722 38491849 -65003125 - B1_Mur2 SINE Alu -13 136 2 1 878 356 200 98 22 chr15 38491849 38491941 -65003033 - Lx8 LINE L1 -447 7026 6928 1 878 317 282 19 0 chr15 38491941 38492044 -65002930 - PB1D10 SINE Alu -12 105 1 1 878 216 392 42 0 chr15 38492246 38492366 -65002608 + L2 LINE L2 2678 2802 -617 1 878 312 174 125 42 chr15 38492369 38492441 -65002533 + ID2 SINE ID 2 79 -4 1 878 275 127 16 113 chr15 38492445 38492507 -65002467 + B1F SINE Alu 86 141 -8 1 878 378 0 0 0 chr15 38493000 38493042 -65001932 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 878 308 369 58 10 chr15 38493170 38493274 -65001700 - ID_B1 SINE B4 -38 186 78 1 878 387 0 0 0 chr15 38493276 38493319 -65001655 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 878 777 271 36 23 chr15 38493350 38493569 -65001405 - B4A SINE B4 -2 290 69 1 878 1339 81 23 0 chr15 38493619 38493793 -65001181 + B2_Mm2 SINE B2 2 179 -16 1 878 1008 68 0 0 chr15 38493793 38493926 -65001048 + (GAA)n Simple_repeat Simple_repeat 2 134 0 1 878 1203 190 146 27 chr15 38493938 38494251 -65000723 + ORR1D1 LTR MaLR 25 384 0 1 878 372 273 13 0 chr15 38494251 38494325 -65000649 - B4A SINE B4 -214 78 4 1 878 538 153 10 30 chr15 38494354 38494455 -65000519 - B1_Mur4 SINE Alu -9 141 43 1 878 2129 254 86 39 chr15 38494479 38495191 -64999783 - Lx8 LINE L1 -50 7423 6679 1 878 532 302 198 10 chr15 38495294 38495501 -64999473 - B4 SINE B4 -43 249 4 1 878 351 0 0 0 chr15 38495632 38495671 -64999303 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 878 559 294 119 36 chr15 38495709 38495928 -64999046 - B4A SINE B4 -55 237 1 1 878 405 102 0 0 chr15 38496052 38496111 -64998863 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 878 286 238 39 31 chr15 38496130 38496243 -64998731 - B1F1 SINE Alu -1 148 1 1 878 319 256 156 0 chr15 38496505 38496595 -64998379 + PB1 SINE Alu 24 127 0 1 878 333 0 0 0 chr15 38496667 38496704 -64998270 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 878 308 294 89 35 chr15 38497849 38498018 -64996956 - MLT2B4 LTR ERVL -374 182 5 1 878 302 115 19 0 chr15 38498043 38498095 -64996879 + (GA)n Simple_repeat Simple_repeat 1 53 0 1 878 558 230 62 35 chr15 38498484 38498628 -64996346 - B1_Mur1 SINE Alu -1 148 1 1 878 309 265 0 67 chr15 38499155 38499244 -64995730 + RSINE1 SINE B4 43 125 -40 1 878 554 259 66 15 chr15 38499322 38499459 -64995515 + ID_B1 SINE B4 81 224 0 1 878 289 312 0 0 chr15 38499488 38499565 -64995409 + ID2 SINE ID 3 79 -4 1 878 494 277 148 19 chr15 38499606 38499768 -64995206 + B3A SINE B2 10 192 -6 1 878 304 259 26 13 chr15 38499903 38500000 -64994974 - B1F SINE Alu -23 126 29 1 878 385 258 62 46 chr15 38500112 38500242 -64994732 + MIR SINE MIR 23 154 -108 1 878 312 27 0 0 chr15 38500279 38500316 -64994658 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 878 333 62 0 0 chr15 38500767 38500815 -64994159 + (CAG)n Simple_repeat Simple_repeat 1 48 0 3 878 422 265 62 85 chr15 38500850 38501027 -64993947 + B4 SINE B4 3 175 -117 4 878 468 106 0 0 chr15 38501060 38501145 -64993829 + (CA)n Simple_repeat Simple_repeat 1 85 0 5 878 198 0 0 0 chr15 38501145 38501166 -64993808 + (TC)n Simple_repeat Simple_repeat 2 23 0 6 878 252 200 40 0 chr15 38501447 38501497 -64993477 + RSINE1 SINE B4 2 53 -112 7 878 211 100 0 0 chr15 38501513 38501543 -64993431 + RSINE1 SINE B4 100 129 -36 8 878 827 244 23 0 chr15 38501569 38501745 -64993229 - B3A SINE B2 -18 180 1 9 878 432 240 114 16 chr15 38501834 38501957 -64993017 + ID_B1 SINE B4 89 223 -1 1 878 680 156 156 0 chr15 38501979 38502107 -64992867 + B1_Mus1 SINE Alu 1 148 0 1 878 395 115 20 40 chr15 38502107 38502198 -64992776 + GA-rich Low_complexity Low_complexity 11 100 0 1 878 221 224 99 56 chr15 38502654 38502725 -64992249 + PB1D9 SINE Alu 33 106 -14 1 878 2223 242 64 44 chr15 38502791 38503526 -64991448 + Lx7 LINE L1 6804 7680 -16 1 878 2547 150 65 70 chr15 38503975 38504949 -64990025 - RMER17B LTR ERVK 0 958 62 1 878 447 92 0 0 chr15 38504949 38505014 -64989960 + (TTTC)n Simple_repeat Simple_repeat 3 67 0 1 878 542 105 26 0 chr15 38506547 38506623 -64988351 - RMER17B LTR ERVK -880 78 1 1 878 314 267 116 31 chr15 38508462 38508609 -64986365 + MLT1A0 LTR MaLR 50 222 -152 1 878 261 228 35 0 chr15 38508609 38508666 -64986308 + ID2 SINE ID 1 59 -24 1 878 253 293 66 148 chr15 38508666 38508853 -64986121 + ID_B1 SINE B4 1 224 0 1 878 793 236 24 99 chr15 38508969 38509181 -64985793 + B3A SINE B2 3 198 0 2 878 387 0 0 0 chr15 38509213 38509256 -64985718 + (GGAA)n Simple_repeat Simple_repeat 4 46 0 2 878 201 296 0 0 chr15 38509335 38509379 -64985595 + G-rich Low_complexity Low_complexity 3 46 0 2 878 231 222 56 0 chr15 38509651 38509705 -64985269 - PB1D9 SINE Alu -1 119 63 2 878 530 172 48 39 chr15 38509657 38509760 -64985214 - ID_B1 SINE B4 -7 217 114 2 878 233 277 46 0 chr15 38509781 38509846 -64985128 - PB1D7 SINE Alu 0 120 53 2 878 408 323 47 0 chr15 38510011 38510138 -64984836 - ID_B1 SINE B4 -91 133 1 2 878 243 217 0 0 chr15 38510142 38510202 -64984772 + T-rich Low_complexity Low_complexity 1 60 0 2 878 889 163 0 52 chr15 38510231 38510386 -64984588 - B1_Mus2 SINE Alu 0 147 1 2 878 639 244 10 54 chr15 38510470 38510650 -64984324 - ID_B1 SINE B4 -48 244 71 2 878 706 286 40 58 chr15 38510692 38510764 -64984210 - B4A SINE B4 -2 290 221 3 878 190 0 67 0 chr15 38510764 38510794 -64984180 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 3 878 539 202 143 0 chr15 38510794 38510913 -64984061 - B1_Mur1 SINE Alu -12 137 2 3 878 706 286 40 58 chr15 38510913 38511065 -64983909 - B4A SINE B4 -72 220 70 3 878 232 267 26 13 chr15 38511196 38511209 -64983765 - B4 SINE B4 -206 86 74 3 878 3436 25 8 0 chr15 38511209 38511602 -64983372 + MTA_Mm LTR MaLR 1 396 0 3 878 242 179 24 4 chr15 38511602 38511664 -64983310 - B4A SINE B4 -219 73 10 3 878 527 241 69 0 chr15 38511663 38511779 -64983195 + ID_B1 SINE B4 101 224 0 3 878 232 282 56 14 chr15 38511849 38511921 -64983053 + ID4_ SINE ID 5 79 -4 3 878 264 335 65 83 chr15 38512571 38512740 -64982234 + RMER12 LTR ERVK 689 854 -468 3 878 449 378 65 30 chr15 38512720 38512952 -64982022 - B4A SINE B4 0 292 53 3 878 289 238 201 20 chr15 38513657 38513770 -64981204 + MIRc SINE MIR 50 187 -81 3 878 369 43 0 0 chr15 38513828 38513875 -64981099 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 878 356 311 97 0 chr15 38513875 38513978 -64980996 - RSINE1 SINE B4 -45 120 8 4 878 854 135 263 6 chr15 38514013 38514184 -64980790 + B3 SINE B2 1 215 -1 4 878 23 0 0 0 chr15 38514190 38514213 -64980761 + AT_rich Low_complexity Low_complexity 1 23 0 4 878 852 140 13 47 chr15 38514564 38514714 -64980260 + B1_Mur1 SINE Alu 5 149 0 4 878 1526 33 22 0 chr15 38514717 38514897 -64980077 + B2_Mm1a SINE B2 1 184 -9 4 878 976 160 0 0 chr15 38514905 38515055 -64979919 + B1_Mur4 SINE Alu 1 150 0 4 878 210 316 47 104 chr15 38515427 38515639 -64979335 - L2b LINE L2 -221 3154 2955 4 878 265 316 0 95 chr15 38515834 38515851 -64979123 + ID SINE ID 65 71 -153 4 878 288 241 36 102 chr15 38515851 38515962 -64979012 + PB1D7 SINE Alu 1 103 -17 4 878 199 324 47 47 chr15 38515987 38516094 -64978880 + MIRc SINE MIR 26 132 -136 4 878 665 240 82 0 chr15 38517180 38517351 -64977623 - Lx9 LINE L1 -190 7454 7270 5 878 1012 168 0 0 chr15 38517364 38517531 -64977443 - RLTR28B LTR ERVL -28 453 287 5 878 710 174 21 48 chr15 38517531 38517676 -64977298 + B1_Mur4 SINE Alu 1 141 -9 5 878 248 154 0 37 chr15 38517709 38517763 -64977211 - RLTR28B LTR ERVL -186 295 244 5 878 2840 113 49 16 chr15 38517758 38518207 -64976767 - RLTR28 LTR ERVL -60 464 1 5 878 367 328 57 0 chr15 38518411 38518533 -64976441 + RMER10B LTR ERVL 270 398 0 5 878 812 281 31 23 chr15 38518538 38518797 -64976177 - B4A SINE B4 -31 261 1 5 878 388 264 73 52 chr15 38519017 38519153 -64975821 + MER21B LTR ERV1 383 521 -342 5 878 272 214 208 104 chr15 38519200 38519325 -64975649 - B1_Mur3 SINE Alu -10 139 2 5 878 777 256 92 5 chr15 38519768 38519964 -64975010 + B3 SINE B2 1 213 -3 5 878 318 328 16 53 chr15 38520047 38520237 -64974737 + LTR73 LTR ERV1 321 503 -69 5 878 1472 178 97 43 chr15 38520265 38520617 -64974357 - ORR1D1 LTR MaLR -3 371 1 6 878 4659 205 130 29 chr15 38520617 38521861 -64973113 - ORR1D1-int LTR MaLR 0 1370 1 6 878 566 167 54 27 chr15 38521861 38521972 -64973002 - ORR1D1 LTR MaLR 0 374 261 6 878 370 259 143 12 chr15 38522259 38522373 -64972601 - PB1D10 SINE Alu -13 136 16 6 878 358 284 0 24 chr15 38522396 38522479 -64972495 - PB1D10 SINE Alu -16 101 21 6 878 244 361 48 0 chr15 38522413 38522496 -64972478 - ID_B1 SINE B4 -57 167 81 6 878 371 241 33 74 chr15 38522595 38522716 -64972258 + PB1D10 SINE Alu 1 116 -1 6 878 245 274 13 169 chr15 38522806 38522872 -64972102 - LTR16A LTR ERVL -8 443 387 6 878 1188 189 19 5 chr15 38522872 38523085 -64971889 + B3 SINE B2 1 216 0 6 878 245 274 13 169 chr15 38523085 38523136 -64971838 - LTR16A LTR ERVL -65 386 345 6 878 439 259 89 0 chr15 38523136 38523271 -64971703 + B1_Mur1 SINE Alu 1 147 -2 6 878 245 274 13 169 chr15 38523271 38523306 -64971668 - LTR16A LTR ERVL -107 344 314 6 878 409 309 21 29 chr15 38523310 38523450 -64971524 + B1F1 SINE Alu 11 149 0 6 878 1156 76 7 0 chr15 38523668 38523813 -64971161 - B1_Mus2 SINE Alu 0 147 2 6 878 344 365 69 6 chr15 38523956 38524116 -64970858 - LTR16A LTR ERVL -251 200 31 6 878 243 0 0 0 chr15 38524384 38524411 -64970563 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 878 425 113 84 0 chr15 38524411 38524482 -64970492 - BC1_Mm scRNA scRNA -75 77 1 7 878 735 228 74 42 chr15 38524791 38525006 -64969968 + ID_B1 SINE B4 2 223 -1 7 878 369 0 0 0 chr15 38525006 38525047 -64969927 + (GA)n Simple_repeat Simple_repeat 1 41 0 7 878 814 88 0 16 chr15 38525047 38525174 -64969800 + (GGGAA)n Simple_repeat Simple_repeat 5 129 0 7 878 481 212 132 9 chr15 38525208 38525322 -64969652 + ID_B1 SINE B4 97 224 0 7 878 325 273 171 0 chr15 38525372 38525460 -64969514 - PB1 SINE Alu -2 125 23 7 878 230 179 26 0 chr15 38525572 38525611 -64969363 - ID4 SINE ID -13 70 31 7 878 370 262 9 45 chr15 38525652 38525764 -64969210 - PB1D10 SINE Alu -8 109 2 7 878 25 0 0 0 chr15 38526041 38526066 -64968908 + AT_rich Low_complexity Low_complexity 1 25 0 7 878 837 105 165 0 chr15 38526086 38526219 -64968755 + B2_Mm2 SINE B2 2 156 -39 8 878 216 0 0 0 chr15 38526222 38526246 -64968728 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 8 878 612 0 0 0 chr15 38526601 38526669 -64968305 + (TTC)n Simple_repeat Simple_repeat 3 70 0 8 878 719 206 0 14 chr15 38526679 38526817 -64968157 - B1_Mur3 SINE Alu -7 142 7 8 878 428 236 7 93 chr15 38526719 38526859 -64968115 - MT2B LTR ERVL -344 257 130 8 878 670 204 42 0 chr15 38527134 38527276 -64967698 + B1_Mur1 SINE Alu 2 149 0 8 878 180 267 0 62 chr15 38528361 38528409 -64966565 - L2 LINE L2 -3313 106 62 8 878 190 319 190 26 chr15 38528494 38528610 -64966364 - MER5B DNA MER1_type -1 177 43 8 878 317 351 26 17 chr15 38528618 38528734 -64966240 + B1F2 SINE Alu 1 117 -32 8 878 662 60 0 0 chr15 38528744 38528828 -64966146 - ORR1A4 LTR MaLR -5 324 241 8 878 2503 140 65 2 chr15 38528827 38529272 -64965702 - ORR1A4-int LTR MaLR -776 1187 715 8 878 983 139 84 74 chr15 38529228 38529430 -64965544 - MT2B LTR ERVL -314 287 84 9 878 785 174 54 0 chr15 38529295 38529462 -64965512 - ORR1A4-int LTR MaLR -1157 806 631 8 878 1288 97 16 5 chr15 38529462 38529648 -64965326 + B2_Mm2 SINE B2 2 189 -6 9 878 285 51 0 0 chr15 38529681 38529720 -64965254 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 9 878 1333 96 6 0 chr15 38529737 38529914 -64965060 + Lx5 LINE L1 6312 6489 -561 9 878 1941 106 18 85 chr15 38529917 38530258 -64964716 - ORR1A4 LTR MaLR -8 321 4 8 878 2881 204 21 7 chr15 38530258 38530821 -64964153 + Lx5 LINE L1 6480 7050 0 9 878 587 150 61 61 chr15 38530893 38531007 -64963967 - PB1D9 SINE Alu -6 114 1 9 878 609 115 0 0 chr15 38531101 38531197 -64963777 + (CA)n Simple_repeat Simple_repeat 1 96 0 9 878 1149 82 0 0 chr15 38531678 38531824 -64963150 - B1_Mus1 SINE Alu 0 148 3 9 878 693 241 90 5 chr15 38532059 38532247 -64962727 + L1MB7 LINE L1 5955 6158 -26 9 878 291 259 45 36 chr15 38532247 38532261 -64962713 - BC1_Mm scRNA scRNA -23 129 117 9 878 302 248 154 29 chr15 38532261 38532365 -64962609 - PB1D10 SINE Alu 0 117 1 1 878 312 259 42 33 chr15 38532365 38532470 -64962504 - ID4 SINE ID -36 116 9 9 878 195 42 0 0 chr15 38532486 38532510 -64962464 + (TGGGGG)n Simple_repeat Simple_repeat 2 25 0 1 878 259 262 61 15 chr15 38532515 38532581 -64962393 + B1F1 SINE Alu 28 96 -53 1 878 556 279 13 20 chr15 38533171 38533321 -64961653 - RSINE1 SINE B4 -14 151 3 1 878 309 118 23 34 chr15 38533321 38533409 -64961565 + T-rich Low_complexity Low_complexity 1 87 0 1 878 286 89 21 62 chr15 38534111 38534159 -64960815 - MTC LTR MaLR -375 46 1 1 878 297 239 104 122 chr15 38534177 38534324 -64960650 - ID4_ SINE ID 0 152 9 1 878 377 222 89 0 chr15 38534341 38534431 -64960543 - PB1D10 SINE Alu 0 117 20 1 878 418 282 25 91 chr15 38534450 38534480 -64960494 - B2_Mm2 SINE B2 -9 186 158 1 878 333 0 0 0 chr15 38534480 38534517 -64960457 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 878 767 250 43 4 chr15 38534517 38534685 -64960289 - B3A SINE B2 -30 168 1 1 878 522 182 246 0 chr15 38534719 38534829 -64960145 - B3 SINE B2 -7 209 73 1 878 262 325 26 13 chr15 38534890 38534968 -64960006 - RSINE1 SINE B4 0 165 87 1 109 390 228 22 126 chr15 38534968 38535224 -64959750 + RLTR11B LTR ERVK 160 416 -111 1 879 2559 259 127 50 chr15 38535256 38536143 -64958831 - MTE-int LTR MaLR -26 1554 599 1 879 212 288 107 48 chr15 38537010 38537094 -64957880 - PB1D10 SINE Alu -23 94 6 1 879 1218 215 36 131 chr15 38537494 38537694 -64957280 + MTE2a LTR MaLR 1 180 -199 1 879 270 0 0 0 chr15 38537694 38537724 -64957250 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 879 1218 215 36 131 chr15 38537724 38537882 -64957092 + MTE2a LTR MaLR 181 325 -54 1 879 491 238 19 0 chr15 38537906 38538011 -64956963 - PB1D9 SINE Alu -9 111 5 1 879 354 187 38 51 chr15 38538018 38538097 -64956877 + MTE2a LTR MaLR 302 379 0 1 879 364 241 20 95 chr15 38539121 38539268 -64955706 + MER63D DNA AcHobo 263 398 -663 1 879 211 329 63 38 chr15 38539258 38539337 -64955637 - ID4_ SINE ID -2 81 1 1 879 2182 67 30 20 chr15 38539941 38540245 -64954729 + IAPLTR2b LTR ERVK 1 307 -20 1 879 49824 56 15 25 chr15 38540262 38546610 -64948364 + IAPEz-int LTR ERVK 21 6481 0 1 879 2194 87 28 19 chr15 38546610 38546927 -64948047 + IAPLTR2b LTR ERVK 1 320 -7 1 879 423 125 0 0 chr15 38546937 38547009 -64947965 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 879 393 231 24 71 chr15 38547094 38547220 -64947754 - PB1D9 SINE Alu 0 120 1 1 879 220 250 69 35 chr15 38547453 38547511 -64947463 - B1F SINE Alu -1 148 89 1 879 266 270 48 0 chr15 38547459 38547522 -64947452 - ID_B1 SINE B4 -5 219 154 1 879 623 229 35 7 chr15 38547623 38547764 -64947210 - B1_Mur1 SINE Alu -2 147 3 1 879 337 267 34 103 chr15 38547787 38547904 -64947070 - PB1D10 SINE Alu 0 117 9 1 879 1903 131 71 16 chr15 38548023 38548404 -64946570 - RMER17C LTR ERVK -8 402 1 1 879 592 192 41 8 chr15 38548441 38548562 -64946412 - B1_Mur1 SINE Alu -1 148 24 1 879 730 177 234 0 chr15 38548574 38548749 -64946225 + B3 SINE B2 1 216 0 1 879 1038 77 142 6 chr15 38548806 38548975 -64945999 - B2_Mm1a SINE B2 -1 192 1 1 879 36 23 0 0 chr15 38549443 38549486 -64945488 + AT_rich Low_complexity Low_complexity 1 43 0 1 879 701 223 90 11 chr15 38549490 38549667 -64945307 - B3A SINE B2 -6 192 2 1 879 302 287 55 39 chr15 38549972 38550099 -64944875 - RMER10B LTR ERVL -23 375 247 1 879 459 229 31 0 chr15 38550498 38550594 -64944380 - PB1D10 SINE Alu -5 112 14 1 879 239 316 122 31 chr15 38550634 38550732 -64944242 + PB1D7 SINE Alu 6 112 -8 1 879 315 49 0 0 chr15 38550734 38550775 -64944199 + (T)n Simple_repeat Simple_repeat 1 41 0 1 879 324 275 48 32 chr15 38550776 38550900 -64944074 + PB1 SINE Alu 1 126 -1 1 879 337 202 148 25 chr15 38550927 38551008 -64943966 + PB1D7 SINE Alu 28 118 -2 1 879 627 218 192 43 chr15 38551025 38551212 -64943762 + ID_B1 SINE B4 1 215 -9 1 879 244 350 109 10 chr15 38551274 38551375 -64943599 + PB1D9 SINE Alu 1 111 -9 1 879 32 57 0 0 chr15 38551375 38551428 -64943546 + AT_rich Low_complexity Low_complexity 1 53 0 1 879 297 242 203 62 chr15 38551472 38551600 -64943374 - B3A SINE B2 -4 194 49 1 879 295 187 1 156 chr15 38551634 38551721 -64943253 + ORR1D2 LTR MaLR 305 405 -14 1 879 987 101 20 26 chr15 38551786 38551938 -64943036 + B2_Mm2 SINE B2 42 192 -3 1 879 656 272 325 7 chr15 38551939 38552131 -64942843 - L1MA6 LINE L1 -182 6118 5870 1 879 2432 122 54 32 chr15 38552131 38552596 -64942378 - IAPLTR2_Mm LTR ERVK 0 475 1 1 879 656 302 55 29 chr15 38552596 38552853 -64942121 - L1MA6 LINE L1 -431 5869 5601 1 879 1629 231 55 33 chr15 38552957 38553414 -64941560 - RLTR11A2 LTR ERVK -43 484 18 1 879 1356 75 37 21 chr15 38553820 38554010 -64940964 - B2_Mm2 SINE B2 0 195 3 1 879 21 0 0 0 chr15 38554014 38554035 -64940939 + AT_rich Low_complexity Low_complexity 1 21 0 1 879 580 230 186 0 chr15 38554035 38554212 -64940762 - B3 SINE B2 -1 215 6 1 879 679 135 0 26 chr15 38554342 38554456 -64940518 - B1_Mur3 SINE Alu -1 148 38 1 879 259 260 53 88 chr15 38554368 38554482 -64940492 - MT2B LTR ERVL -323 278 169 1 879 410 200 199 64 chr15 38554910 38555081 -64939893 + B3A SINE B2 1 194 -4 1 879 369 279 52 90 chr15 38555099 38555387 -64939587 - RMER17C LTR ERVK -68 342 66 1 879 846 157 0 0 chr15 38555594 38555734 -64939240 + B1_Mur3 SINE Alu 5 144 -5 1 879 297 0 0 0 chr15 38555838 38555871 -64939103 + (TCTG)n Simple_repeat Simple_repeat 4 36 0 1 879 390 169 117 0 chr15 38556049 38556126 -64938848 - B1_Mur1 SINE Alu -18 131 46 1 879 243 203 131 33 chr15 38556087 38556148 -64938826 - MT2B LTR ERVL -362 239 173 1 879 584 265 107 12 chr15 38556264 38556432 -64938542 + MTE2a LTR MaLR 60 243 -136 1 879 573 15 0 0 chr15 38556897 38556963 -64938011 + (TC)n Simple_repeat Simple_repeat 1 66 0 1 879 435 209 105 63 chr15 38557021 38557164 -64937810 + MTE2a LTR MaLR 231 379 0 1 879 753 165 4 74 chr15 38558450 38558642 -64936332 - RMER17C-int LTR ERVK -704 2534 2265 1 879 1191 54 7 0 chr15 38558657 38558804 -64936170 + B1_Mus1 SINE Alu 1 148 0 1 879 1117 95 7 0 chr15 38558963 38559110 -64935864 + B1_Mus1 SINE Alu 1 148 0 1 879 257 281 33 33 chr15 38559213 38559305 -64935669 - RLTR19-int LTR ERVK -2865 3272 3181 1 879 3297 148 60 33 chr15 38559354 38559955 -64935019 - RLTR19-int LTR ERVK -2947 3190 2574 1 879 543 56 0 0 chr15 38559955 38560026 -64934948 + (TCC)n Simple_repeat Simple_repeat 3 73 0 1 879 1232 68 0 0 chr15 38560028 38560176 -64934798 - B1_Mus1 SINE Alu 0 148 1 1 879 368 186 36 152 chr15 38560183 38560348 -64934626 - RLTR19-int LTR ERVK -3807 2330 2185 1 879 1041 72 0 80 chr15 38560360 38560510 -64934464 + B1_Mus1 SINE Alu 1 138 -10 1 879 261 0 0 0 chr15 38560510 38560539 -64934435 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 879 321 182 39 0 chr15 38560571 38560648 -64934326 - RLTR19-int LTR ERVK -4055 2082 2003 1 879 1300 181 47 77 chr15 38560641 38560981 -64933993 - RLTR19-int LTR ERVK -4821 1316 987 1 879 1442 55 22 0 chr15 38561137 38561320 -64933654 - B2_Mm1a SINE B2 -5 188 2 1 879 544 112 0 0 chr15 38561321 38561401 -64933573 - RLTR19-int LTR ERVK -5169 968 889 1 879 1172 196 32 32 chr15 38562067 38562320 -64932654 - RodERV21-int LTR ERV1 -3989 1002 750 1 879 1942 208 89 68 chr15 38562321 38562895 -64932079 - RodERV21-int LTR ERV1 -4349 642 57 1 879 1568 115 128 26 chr15 38563150 38563454 -64931520 - RLTR23 LTR ERV1 -77 353 19 1 879 962 242 5 19 chr15 38563502 38563717 -64931257 - B3 SINE B2 -4 212 1 1 879 218 116 0 23 chr15 38563808 38563852 -64931122 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 1 879 237 188 62 15 chr15 38563872 38563937 -64931037 - B1F2 SINE Alu -80 69 2 1 879 1130 34 7 52 chr15 38564052 38564206 -64930768 - B1_Mm SINE Alu 0 147 1 1 879 410 231 16 64 chr15 38564446 38564571 -64930403 + PB1 SINE Alu 5 123 -4 1 879 381 307 78 78 chr15 38564684 38564889 -64930085 + B4A SINE B4 84 288 -4 1 879 857 189 0 7 chr15 38565269 38565418 -64929556 - B1_Mur1 SINE Alu -1 148 1 1 879 249 159 0 0 chr15 38565424 38565468 -64929506 - ID_B1 SINE B4 -4 220 177 1 879 213 290 203 0 chr15 38565568 38565637 -64929337 + B1F SINE Alu 42 124 -25 1 879 239 316 103 45 chr15 38565806 38565922 -64929052 - MLT1A0 LTR MaLR -85 280 162 1 879 316 345 13 39 chr15 38565922 38566076 -64928898 - RSINE1 SINE B4 -15 150 1 1 879 239 316 103 45 chr15 38566076 38566115 -64928859 - MLT1A0 LTR MaLR -204 161 118 1 879 472 262 24 24 chr15 38566166 38566291 -64928683 + ID_B1 SINE B4 92 216 -8 1 879 813 73 0 0 chr15 38566496 38566605 -64928369 + (GAAA)n Simple_repeat Simple_repeat 4 112 0 1 879 494 294 64 0 chr15 38566680 38566898 -64928076 + L1M4c LINE L1 1925 2156 -4228 1 879 721 196 158 0 chr15 38566920 38567104 -64927870 + B3 SINE B2 2 214 -2 1 879 1507 155 15 76 chr15 38567117 38567445 -64927529 + ORR1B2 LTR MaLR 4 311 -56 1 879 893 112 8 0 chr15 38567457 38567591 -64927383 - B1_Mus1 SINE Alu 0 148 14 1 879 5702 137 34 29 chr15 38567635 38568657 -64926317 + Lx3C LINE L1 5948 6974 -2 1 879 956 247 119 75 chr15 38568717 38569025 -64925949 - RMER13A LTR ERVK -202 658 266 1 879 1237 21 14 0 chr15 38569025 38569168 -64925806 + B1_Mm SINE Alu 2 146 -1 1 879 189 0 0 0 chr15 38569169 38569190 -64925784 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1 879 956 221 93 103 chr15 38569190 38569468 -64925506 - RMER13A LTR ERVK -595 265 1 1 879 213 189 0 0 chr15 38569480 38569517 -64925457 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 879 1410 79 11 0 chr15 38569553 38569742 -64925232 + B2_Mm1t SINE B2 2 192 -1 1 879 237 132 0 0 chr15 38569746 38569784 -64925190 + (TAG)n Simple_repeat Simple_repeat 1 38 0 1 879 1831 127 135 9 chr15 38569807 38570133 -64924841 - ORR1B2 LTR MaLR 0 367 1 1 879 371 313 136 32 chr15 38570195 38570273 -64924701 - MER57A-int LTR ERV1 -1024 5163 5070 1 879 1172 279 7 98 chr15 38570273 38570690 -64924284 - MTEa LTR MaLR 0 379 1 1 879 371 313 136 32 chr15 38570690 38570862 -64924112 - MER57A-int LTR ERV1 -1118 5069 4887 1 879 652 133 212 0 chr15 38571636 38571749 -64923225 + B1_Mur4 SINE Alu 5 141 -9 1 879 799 345 59 24 chr15 38571916 38572338 -64922636 - MER57A-int LTR ERV1 -1340 4847 4411 1 879 1384 86 32 0 chr15 38572775 38572961 -64922013 - B2_Mm1a SINE B2 0 193 2 2 879 306 316 90 31 chr15 38573110 38573332 -64921642 - HERV16-int LTR ERVL -4761 235 1 2 879 1791 160 46 57 chr15 38574531 38574902 -64920072 + ORR1B2 LTR MaLR 1 367 0 2 879 1152 64 0 0 chr15 38574995 38575135 -64919839 - B1_Mus2 SINE Alu -6 141 2 2 879 472 321 15 7 chr15 38575161 38575296 -64919678 + ID_B1 SINE B4 80 215 -9 2 879 318 256 240 0 chr15 38575559 38575684 -64919290 + ID_B1 SINE B4 2 156 -68 2 879 1128 95 0 0 chr15 38575684 38575831 -64919143 + B1_Mus1 SINE Alu 2 148 0 2 879 269 326 21 10 chr15 38576163 38576259 -64918715 - PB1D10 SINE Alu -13 104 8 2 879 248 77 26 0 chr15 38576302 38576341 -64918633 + B3A SINE B2 3 42 -156 2 879 1180 55 0 0 chr15 38576354 38576499 -64918475 - B1_Mus1 SINE Alu 0 148 4 2 879 387 0 0 0 chr15 38576559 38576602 -64918372 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 879 522 0 0 0 chr15 38576610 38576668 -64918306 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 2 879 308 233 35 22 chr15 38576708 38576835 -64918139 - RLTR13D3 LTR ERVK -42 1072 983 2 879 257 167 0 0 chr15 38577088 38577130 -64917844 - B2_Mm2 SINE B2 -153 42 1 2 879 22 70 0 0 chr15 38577164 38577207 -64917767 + AT_rich Low_complexity Low_complexity 1 43 0 2 879 609 223 62 0 chr15 38577667 38577797 -64917177 + B1_Mur2 SINE Alu 1 138 -11 2 879 222 37 0 0 chr15 38577797 38577824 -64917150 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 879 1034 14 29 0 chr15 38577904 38578044 -64916930 + (TAGA)n Simple_repeat Simple_repeat 3 146 0 2 879 456 19 0 0 chr15 38578059 38578112 -64916862 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 879 820 166 7 0 chr15 38578357 38578496 -64916478 - B1_Mur4 SINE Alu 0 150 11 2 879 419 257 37 106 chr15 38578359 38578520 -64916454 - B4 SINE B4 -69 223 74 2 879 578 42 10 31 chr15 38578589 38578687 -64916287 - L1Md_F3 LINE L1 -2 6582 6487 2 879 292 299 68 11 chr15 38578859 38578947 -64916027 + ID_B1 SINE B4 79 171 -53 2 879 363 224 71 0 chr15 38578963 38579061 -64915913 + Charlie4a DNA MER1_type 160 264 -244 2 879 225 350 38 0 chr15 38579063 38579143 -64915831 + ID_B1 SINE B4 80 162 -62 2 879 1120 51 13 0 chr15 38579219 38579375 -64915599 + (GGGAGA)n Simple_repeat Simple_repeat 3 160 0 2 879 808 154 7 0 chr15 38579590 38579726 -64915248 - RLTR14 LTR ERV1 0 382 246 2 879 929 161 0 33 chr15 38579722 38579902 -64915072 - B2_Mm2 SINE B2 -7 188 15 2 879 1481 152 15 8 chr15 38579896 38580162 -64914812 - RLTR14 LTR ERV1 -112 270 3 2 879 257 295 26 43 chr15 38580543 38580660 -64914314 - PB1D10 SINE Alu 0 117 3 2 879 366 23 0 0 chr15 38581080 38581123 -64913851 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 2 879 1818 149 118 3 chr15 38581254 38581611 -64913363 - RMER10B LTR ERVL 0 398 1 2 879 2233 136 121 33 chr15 38581892 38582372 -64912602 - RLTR28 LTR ERVL 0 524 3 2 879 29 28 0 0 chr15 38582389 38582425 -64912549 + AT_rich Low_complexity Low_complexity 1 36 0 2 879 195 152 0 0 chr15 38582467 38582513 -64912461 + T-rich Low_complexity Low_complexity 1 46 0 2 879 351 145 65 0 chr15 38583694 38583756 -64911218 - B1_Mur4 SINE Alu -66 84 19 2 879 979 226 70 22 chr15 38583764 38584035 -64910939 - MTD LTR MaLR -2 417 134 2 879 1816 196 50 25 chr15 38584055 38584533 -64910441 - RLTR11A2 LTR ERVK -17 510 4 2 879 389 184 266 0 chr15 38584540 38584649 -64910325 - MTD LTR MaLR -275 144 7 2 879 477 231 134 0 chr15 38585482 38585616 -64909358 - ORR1B2 LTR MaLR -215 152 1 2 879 678 173 102 0 chr15 38585882 38586009 -64908965 + B1_Mus2 SINE Alu 1 140 -7 2 879 282 116 0 0 chr15 38586009 38586052 -64908922 + (CAGA)n Simple_repeat Simple_repeat 4 46 0 2 879 387 314 0 32 chr15 38586092 38586217 -64908757 + B1F SINE Alu 28 148 -1 2 879 245 29 0 29 chr15 38586229 38586264 -64908710 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 879 333 239 34 0 chr15 38586480 38586568 -64908406 - B1F SINE Alu -16 133 43 2 879 422 193 29 0 chr15 38586613 38586716 -64908258 - PB1D10 SINE Alu 0 120 13 2 879 570 67 0 0 chr15 38586737 38586812 -64908162 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 2 879 553 229 17 0 chr15 38586833 38586951 -64908023 - PB1D7 SINE Alu 0 120 1 2 879 24 32 0 0 chr15 38586966 38586997 -64907977 + AT_rich Low_complexity Low_complexity 1 31 0 2 879 613 264 19 19 chr15 38587033 38587195 -64907779 - RSINE1 SINE B4 0 165 4 2 879 672 236 7 7 chr15 38587203 38587344 -64907630 - B1_Mur1 SINE Alu -8 141 1 2 879 357 226 158 38 chr15 38587374 38587507 -64907467 + B1F SINE Alu 1 149 0 2 879 1209 61 0 0 chr15 38587519 38587666 -64907308 + B1_Mm SINE Alu 1 147 0 2 879 1258 236 36 0 chr15 38588286 38588566 -64906408 - MTD LTR MaLR -39 380 91 2 879 552 202 73 0 chr15 38588564 38588688 -64906286 - B3A SINE B2 -55 143 11 2 879 2906 139 51 59 chr15 38588768 38589296 -64905678 - RLTR28 LTR ERVL 0 524 1 2 879 1335 304 75 19 chr15 38589328 38589851 -64905123 - MTE-int LTR MaLR -1027 553 2 2 879 818 249 98 20 chr15 38589914 38590160 -64904814 + ORR1D2 LTR MaLR 5 269 -101 2 879 516 230 95 38 chr15 38590195 38590353 -64904621 - MTE2b LTR MaLR -44 335 169 2 879 532 222 108 49 chr15 38590558 38590762 -64904212 - B3 SINE B2 0 216 1 2 879 470 204 142 0 chr15 38590806 38590919 -64904055 - MTE2b LTR MaLR -239 140 12 2 879 236 195 0 41 chr15 38592956 38593014 -64901960 + B1_Mus1 SINE Alu 7 62 -87 2 879 348 24 0 0 chr15 38593036 38593077 -64901897 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 879 353 169 26 0 chr15 38593077 38593154 -64901820 + (CATATA)n Simple_repeat Simple_repeat 4 82 0 2 879 207 0 0 0 chr15 38593156 38593179 -64901795 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 879 235 294 36 45 chr15 38593241 38593387 -64901587 - L2b LINE L2 -212 3163 3019 2 879 545 162 162 0 chr15 38593927 38594038 -64900936 - B1_Mur2 SINE Alu 0 149 21 2 879 234 0 0 0 chr15 38594039 38594065 -64900909 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 879 334 222 33 0 chr15 38594083 38594173 -64900801 - PB1D7 SINE Alu 0 120 28 2 879 533 106 0 23 chr15 38594211 38594298 -64900676 - B1_Mus2 SINE Alu 0 147 63 2 879 486 221 8 34 chr15 38594745 38594862 -64900112 - PB1D9 SINE Alu 0 120 7 2 879 241 297 14 0 chr15 38594914 38594988 -64899986 - PB1D10 SINE Alu -32 85 11 2 879 309 51 0 0 chr15 38595060 38595099 -64899875 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 879 408 225 25 0 chr15 38595247 38595327 -64899647 + PB1D9 SINE Alu 12 93 -27 2 879 996 178 64 5 chr15 38595424 38595627 -64899347 - B3 SINE B2 -1 215 1 2 879 21 36 0 0 chr15 38596287 38596315 -64898659 + AT_rich Low_complexity Low_complexity 1 28 0 2 879 308 318 61 39 chr15 38596433 38596613 -64898361 - B4 SINE B4 -107 185 2 2 879 263 299 92 17 chr15 38596619 38596738 -64898236 - B1_Mus1 SINE Alu 0 148 21 2 879 930 232 18 26 chr15 38596888 38597114 -64897860 - ID_B1 SINE B4 0 224 1 2 879 255 269 89 32 chr15 38597781 38597904 -64897070 - MER2 DNA MER2_type -110 235 106 2 879 579 112 0 0 chr15 38597963 38598052 -64896922 + (TG)n Simple_repeat Simple_repeat 2 90 0 2 879 364 266 53 11 chr15 38598150 38598245 -64896729 - RSINE1 SINE B4 -64 101 3 2 879 436 256 111 8 chr15 38598448 38598574 -64896400 - B1F1 SINE Alu -8 141 3 2 879 192 280 20 0 chr15 38598993 38599043 -64895931 + L2c LINE L2 3291 3341 -46 2 879 728 228 15 0 chr15 38599888 38600024 -64894950 + B1_Mur1 SINE Alu 3 140 -9 2 879 271 288 158 50 chr15 38600066 38600205 -64894769 - RSINE1 SINE B4 -9 156 3 2 879 406 280 22 50 chr15 38600414 38600553 -64894421 + B3 SINE B2 28 162 -54 2 879 405 0 0 0 chr15 38600554 38600599 -64894375 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 879 322 311 88 7 chr15 38600662 38600798 -64894176 + L1ME1 LINE L1 6014 6160 -19 2 879 223 192 37 37 chr15 38601060 38601114 -64893860 + RSINE1 SINE B4 88 141 -24 2 879 192 40 0 0 chr15 38601123 38601148 -64893826 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 879 417 267 17 8 chr15 38601820 38601937 -64893037 + ID_B1 SINE B4 94 211 -13 2 879 362 369 0 24 chr15 38602249 38602374 -64892600 + PB1 SINE Alu 1 122 -5 2 879 291 290 82 22 chr15 38603470 38603604 -64891370 + PB1D10 SINE Alu 1 142 -8 2 879 207 88 0 0 chr15 38603982 38604016 -64890958 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 2 879 389 317 24 24 chr15 38604016 38604139 -64890835 - B4A SINE B4 -68 224 102 2 879 505 250 24 0 chr15 38604371 38604495 -64890479 - B1F SINE Alu -6 143 17 2 879 244 222 0 0 chr15 38604552 38604597 -64890377 - L1M4 LINE L1 -696 5478 5434 2 879 387 168 234 0 chr15 38604617 38604724 -64890250 - B1_Mur1 SINE Alu 0 149 18 2 879 676 203 0 84 chr15 38604825 38604992 -64889982 - B3A SINE B2 -2 196 44 2 879 353 197 0 0 chr15 38605085 38605146 -64889828 - PB1D10 SINE Alu -52 65 5 2 879 232 250 62 0 chr15 38605311 38605375 -64889599 + B1F SINE Alu 29 96 -53 2 879 424 236 22 0 chr15 38605488 38605577 -64889397 - ID_B1 SINE B4 -54 170 80 2 879 234 0 0 0 chr15 38606398 38606424 -64888550 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 3 879 447 168 159 0 chr15 38606426 38606533 -64888441 - B1F2 SINE Alu -7 142 19 3 879 1124 82 0 0 chr15 38606539 38606686 -64888288 + B1_Mm SINE Alu 1 147 0 3 879 192 152 0 0 chr15 38606686 38606719 -64888255 + A-rich Low_complexity Low_complexity 1 33 0 3 879 722 208 98 25 chr15 38606768 38606931 -64888043 + B3A SINE B2 1 175 -23 3 879 684 259 0 0 chr15 38607059 38607198 -64887776 + B1_Mus2 SINE Alu 4 142 -5 3 879 242 241 0 18 chr15 38607424 38607479 -64887495 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 3 879 2904 141 70 15 chr15 38607481 38608013 -64886961 - RLTR31_Mm LTR ERVK 0 561 1 3 879 324 70 0 0 chr15 38608015 38608058 -64886916 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 879 450 127 0 0 chr15 38608058 38608129 -64886845 + (GA)n Simple_repeat Simple_repeat 1 71 0 3 879 564 255 7 45 chr15 38608150 38608353 -64886621 - B3 SINE B2 -1 192 1 3 879 548 195 53 0 chr15 38608357 38608470 -64886504 - PB1D9 SINE Alu 0 120 2 3 879 1197 68 0 0 chr15 38608592 38608739 -64886235 + B1_Mus2 SINE Alu 1 147 0 3 879 204 40 0 0 chr15 38608739 38608764 -64886210 + (A)n Simple_repeat Simple_repeat 1 25 0 3 879 741 129 32 0 chr15 38608815 38608939 -64886035 - B1_Mur4 SINE Alu -1 149 22 3 879 647 260 35 6 chr15 38609285 38609455 -64885519 + B3A SINE B2 1 175 -23 3 879 447 106 0 0 chr15 38609868 38609934 -64885040 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 879 447 234 44 122 chr15 38609950 38610130 -64884844 - B3A SINE B2 -30 168 3 3 879 258 206 62 125 chr15 38610509 38610653 -64884321 - B2_Mm2 SINE B2 0 195 61 3 879 919 65 0 28 chr15 38610942 38611084 -64883890 + B1_Mur4 SINE Alu 11 148 -2 3 879 653 200 23 0 chr15 38611406 38611536 -64883438 + B1_Mur1 SINE Alu 12 144 -5 3 879 270 328 49 25 chr15 38611825 38611838 -64883136 - B1_Mus1 SINE Alu -21 127 3 3 879 299 270 55 83 chr15 38611838 38611947 -64883027 - ID_B1 SINE B4 -35 189 84 3 879 280 310 28 0 chr15 38614454 38614525 -64880449 - ID SINE ID -144 80 8 3 879 678 214 233 0 chr15 38614607 38614766 -64880208 + B3 SINE B2 2 197 -19 3 879 905 207 58 19 chr15 38614771 38614978 -64879996 + B3 SINE B2 1 215 -1 3 879 264 200 0 0 chr15 38615020 38615080 -64879894 + CT-rich Low_complexity Low_complexity 4 63 0 3 879 344 204 164 10 chr15 38615085 38615189 -64879785 - PB1D9 SINE Alu 0 120 1 3 879 239 295 0 0 chr15 38615196 38615257 -64879717 - PB1D10 SINE Alu -27 90 30 3 879 614 273 0 0 chr15 38615318 38615457 -64879517 - B1F SINE Alu -8 141 3 3 879 480 62 0 0 chr15 38615507 38615571 -64879403 + (TG)n Simple_repeat Simple_repeat 2 65 0 3 879 387 198 344 0 chr15 38615571 38615693 -64879281 - B3 SINE B2 -51 165 2 3 879 25 0 0 0 chr15 38616023 38616048 -64878926 + AT_rich Low_complexity Low_complexity 1 25 0 3 879 217 160 0 57 chr15 38616134 38616187 -64878787 + B3A SINE B2 2 51 -147 3 879 21 0 0 0 chr15 38616694 38616715 -64878259 + AT_rich Low_complexity Low_complexity 1 21 0 3 879 353 261 126 0 chr15 38616957 38617076 -64877898 - B1F SINE Alu -6 143 10 3 879 500 213 271 6 chr15 38617323 38617493 -64877481 + ID_B1 SINE B4 1 215 -9 3 879 4482 64 31 2 chr15 38617857 38618432 -64876542 - L1Md_F2 LINE L1 -1 6581 5990 3 879 290 234 88 69 chr15 38619292 38619313 -64875661 - ID_B1 SINE B4 -48 244 173 3 879 340 211 226 9 chr15 38619313 38619428 -64875546 - B1F1 SINE Alu -2 147 8 3 879 290 234 88 69 chr15 38619428 38619455 -64875519 - ID_B1 SINE B4 -48 172 69 3 879 987 171 74 0 chr15 38619594 38619769 -64875205 - B3 SINE B2 -28 188 1 3 879 320 294 48 19 chr15 38619965 38620069 -64874905 - B1F SINE Alu -38 111 5 3 879 324 70 0 0 chr15 38620772 38620815 -64874159 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 879 219 200 133 0 chr15 38622505 38622565 -64872409 + L3 LINE CR1 2126 2193 -2296 3 879 646 194 69 8 chr15 38622937 38623067 -64871907 - B1_Mur1 SINE Alu -10 139 2 3 879 1273 34 0 0 chr15 38623617 38623765 -64871209 - B1_Mus1 SINE Alu 0 148 1 3 879 266 171 80 67 chr15 38624055 38624130 -64870844 - ID4_ SINE ID -6 77 2 3 879 1117 123 62 0 chr15 38624537 38624716 -64870258 - B2_Mm1t SINE B2 -3 190 1 3 879 684 166 63 21 chr15 38625078 38625220 -64869754 + B1_Mur2 SINE Alu 2 149 0 3 879 24 77 0 0 chr15 38625220 38625272 -64869702 + AT_rich Low_complexity Low_complexity 1 52 0 3 879 1343 67 33 11 chr15 38625304 38625486 -64869488 - B2_Mm2 SINE B2 -9 186 1 3 879 599 226 155 0 chr15 38625512 38625667 -64869307 + B3A SINE B2 13 191 -7 3 879 674 207 64 0 chr15 38625894 38626034 -64868940 + B1_Mur3 SINE Alu 1 149 0 3 879 485 275 66 17 chr15 38626623 38626804 -64868170 + MTEb LTR MaLR 188 377 -2 3 879 24 0 0 0 chr15 38627921 38627945 -64867029 + AT_rich Low_complexity Low_complexity 1 24 0 3 879 895 194 112 11 chr15 38627972 38628160 -64866814 - B3 SINE B2 0 216 10 3 879 309 227 265 19 chr15 38628217 38628428 -64866546 + L1MB8 LINE L1 5845 6107 -71 3 879 802 202 25 14 chr15 38628442 38628624 -64866350 - B3 SINE B2 -9 186 1 3 879 384 184 39 3 chr15 38629102 38629208 -64865766 - B1_Mus1 SINE Alu 0 120 1 3 879 879 311 156 50 chr15 38629351 38629507 -64865467 - MTEa-int LTR MaLR -936 644 465 3 879 1280 27 0 0 chr15 38629507 38629654 -64865320 - B1_Mm SINE Alu 0 147 1 3 879 879 311 156 50 chr15 38629654 38630079 -64864895 - MTEa-int LTR MaLR -1116 464 1 3 879 603 224 147 97 chr15 38630079 38630367 -64864607 - MTEa LTR MaLR 0 379 44 3 879 256 300 93 118 chr15 38630317 38630638 -64864336 + ORR1E LTR MaLR 42 354 -5 3 879 1101 177 23 28 chr15 38631235 38631450 -64863524 - B3 SINE B2 0 216 3 3 879 1226 220 74 43 chr15 38631466 38631818 -64863156 - ORR1D2 LTR MaLR -4 366 4 3 879 2463 104 65 17 chr15 38632763 38633165 -64861809 - MTC LTR MaLR 0 421 1 3 879 359 283 43 34 chr15 38633290 38633407 -64861567 + B1F SINE Alu 29 146 -3 3 879 1260 56 69 48 chr15 38633723 38633911 -64861063 - B2_Mm1t SINE B2 0 193 2 3 879 606 118 0 0 chr15 38634075 38634168 -64860806 + (TAGA)n Simple_repeat Simple_repeat 1 93 0 3 879 348 259 14 0 chr15 38634299 38634388 -64860586 + ID4 SINE ID 4 93 -59 3 879 225 146 110 31 chr15 38634875 38635038 -64859936 + (TGAG)n Simple_repeat Simple_repeat 4 179 0 3 879 188 135 27 0 chr15 38635151 38635188 -64859786 + CT-rich Low_complexity Low_complexity 1 38 0 3 879 209 347 0 0 chr15 38635193 38635223 -64859751 + polypyrimidine Low_complexity Low_complexity 44 73 0 3 879 1488 53 32 0 chr15 38635223 38635410 -64859564 - B2_Mm1a SINE B2 0 193 1 3 879 209 347 0 0 chr15 38635410 38635451 -64859523 + polypyrimidine Low_complexity Low_complexity 3 43 0 3 879 264 218 49 49 chr15 38635451 38635533 -64859441 - ID4_ SINE ID 0 83 2 3 879 517 209 50 3 chr15 38635746 38635865 -64859109 + B1F SINE Alu 20 147 -2 3 879 325 238 62 106 chr15 38636056 38636202 -64858772 + RMER10A LTR ERVL 12 150 -292 3 879 2523 134 5 70 chr15 38636202 38636643 -64858331 + RLTR23 LTR ERV1 1 412 -18 3 879 863 190 7 0 chr15 38636641 38636783 -64858191 - B3 SINE B2 -73 143 1 3 879 346 287 55 18 chr15 38637226 38637336 -64857638 + PB1D9 SINE Alu 1 114 -6 3 879 447 19 0 0 chr15 38637387 38637439 -64857535 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 879 180 318 32 105 chr15 38637679 38637774 -64857200 - L2c LINE L2 -17 3370 3283 3 879 43 35 0 0 chr15 38638955 38639012 -64855962 + AT_rich Low_complexity Low_complexity 1 57 0 3 879 261 277 51 41 chr15 38639200 38639298 -64855676 - MIRb SINE MIR -1 267 169 3 879 379 268 129 7 chr15 38641186 38641325 -64853649 + MER67C LTR ERV1 69 224 -487 3 879 651 231 69 0 chr15 38641321 38641451 -64853523 - B3A SINE B2 -53 145 7 3 879 432 55 0 0 chr15 38641484 38641539 -64853435 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 3 879 218 317 119 0 chr15 38641541 38641642 -64853332 - B1F SINE Alu -36 113 1 3 879 446 221 82 52 chr15 38641644 38641778 -64853196 - B1_Mur1 SINE Alu 0 149 12 3 879 585 279 56 19 chr15 38641818 38642088 -64852886 + L1ME1 LINE L1 5631 5910 -269 3 879 307 300 0 0 chr15 38642239 38642309 -64852665 - B4 SINE B4 -4 288 219 3 879 764 150 14 0 chr15 38642332 38642472 -64852502 + CT-rich Low_complexity Low_complexity 3 144 0 3 879 562 246 144 35 chr15 38642473 38642675 -64852299 - B4 SINE B4 -68 224 1 3 879 790 284 91 23 chr15 38642883 38643225 -64851749 - MLT1A0 LTR MaLR 0 365 1 3 879 281 241 82 24 chr15 38644132 38644217 -64850757 - MMERVK10C-int LTR ERVK -930 6651 6562 3 879 234 267 51 103 chr15 38644519 38644636 -64850338 + MLT1G LTR MaLR 148 258 -333 3 879 1181 219 118 56 chr15 38644654 38645115 -64849859 + RMER4B LTR ERVK 46 574 -11 3 879 303 28 0 0 chr15 38645245 38645281 -64849693 + (GA)n Simple_repeat Simple_repeat 1 36 0 3 879 516 262 0 68 chr15 38645774 38645950 -64849024 - RNLTR23 LTR ERVK 0 642 479 3 879 453 81 0 0 chr15 38646230 38646292 -64848682 + (TTTA)n Simple_repeat Simple_repeat 2 63 0 3 879 467 297 65 7 chr15 38646532 38646671 -64848303 + RSINE1 SINE B4 2 148 -17 3 879 7548 146 46 62 chr15 38646732 38648201 -64846773 - ORR1A4-int LTR MaLR -517 1446 1 3 879 1802 132 58 29 chr15 38648205 38648517 -64846457 - ORR1A4 LTR MaLR -8 321 1 3 879 682 219 78 13 chr15 38648599 38648688 -64846286 - RLTR20C LTR ERVK 0 578 481 4 879 996 103 0 0 chr15 38648688 38648862 -64846112 + (CA)n Simple_repeat Simple_repeat 2 175 0 4 879 1183 195 85 60 chr15 38648862 38649220 -64845754 - RLTR20C LTR ERVK -98 480 3 4 879 29 0 0 0 chr15 38649463 38649492 -64845482 + AT_rich Low_complexity Low_complexity 1 29 0 4 879 925 85 93 0 chr15 38649492 38649621 -64845353 - B1_Mus1 SINE Alu -3 145 5 4 879 1138 183 71 0 chr15 38649645 38649842 -64845132 - B3 SINE B2 -5 211 1 4 879 699 112 0 0 chr15 38649918 38650025 -64844949 + (TA)n Simple_repeat Simple_repeat 1 107 0 4 879 503 258 288 18 chr15 38650099 38650328 -64844646 - B4A SINE B4 0 292 2 4 879 601 218 103 22 chr15 38650342 38650478 -64844496 - B1_Mur1 SINE Alu -1 148 2 4 879 189 107 0 0 chr15 38650596 38650624 -64844350 + (TTA)n Simple_repeat Simple_repeat 2 29 0 4 879 769 295 0 0 chr15 38650643 38650809 -64844165 - B3A SINE B2 -17 181 16 4 879 378 211 0 0 chr15 38651047 38651156 -64843818 + (TG)n Simple_repeat Simple_repeat 2 110 0 4 879 267 54 0 0 chr15 38651200 38651237 -64843737 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 4 879 203 250 0 20 chr15 38652308 38652357 -64842617 + GA-rich Low_complexity Low_complexity 3 50 0 4 879 454 294 109 7 chr15 38652546 38652683 -64842291 + RSINE1 SINE B4 3 153 -12 4 879 245 98 24 0 chr15 38652704 38652745 -64842229 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 879 923 207 65 10 chr15 38652769 38652969 -64842005 + B3 SINE B2 4 214 -2 4 879 2438 200 25 130 chr15 38653091 38653774 -64841200 - RMER19C LTR ERVK 0 611 1 4 879 219 264 80 71 chr15 38653863 38654008 -64840966 + MIRb SINE MIR 20 184 -92 4 879 8125 60 2 0 chr15 38654119 38655215 -64839759 + L1_Mus1 LINE L1 5470 6567 0 4 879 275 0 0 28 chr15 38655223 38655259 -64839715 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 879 1291 143 41 9 chr15 38655937 38656155 -64838819 - URR1B DNA MER1_type 0 225 1 4 879 320 311 35 91 chr15 38656803 38656848 -64838126 - B2_Mm2 SINE B2 -7 188 149 4 879 288 0 0 0 chr15 38656848 38656880 -64838094 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 879 522 308 34 4 chr15 38656880 38657032 -64837942 - B3A SINE B2 -46 152 2 4 879 278 314 23 92 chr15 38657057 38657151 -64837823 - RSINE1 SINE B4 0 165 79 4 879 300 53 0 0 chr15 38657151 38657189 -64837785 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 4 879 278 314 23 92 chr15 38657189 38657224 -64837750 - RSINE1 SINE B4 -87 78 45 4 879 891 160 35 0 chr15 38657280 38657424 -64837550 - B1_Mur3 SINE Alu 0 149 1 4 879 717 73 0 0 chr15 38657451 38657547 -64837427 + (CA)n Simple_repeat Simple_repeat 1 96 0 4 879 659 169 71 16 chr15 38657609 38657735 -64837239 - B1_Mur1 SINE Alu -6 143 11 4 879 435 291 129 22 chr15 38657722 38657947 -64837027 - B4A SINE B4 -42 250 2 4 879 494 325 165 41 chr15 38658197 38658652 -64836322 + MLT2B2 LTR ERVL 1 545 -9 4 879 1710 180 139 3 chr15 38659071 38659394 -64835580 - ORR1C1 LTR MaLR -8 370 4 4 879 599 39 0 13 chr15 38659427 38659506 -64835468 + (TTTC)n Simple_repeat Simple_repeat 3 80 0 4 879 1159 71 0 0 chr15 38659508 38659649 -64835325 - B1_Mm SINE Alu -6 141 1 4 879 3326 82 4 52 chr15 38660005 38660504 -64834470 + IAPLTR2_Mm LTR ERVK 1 475 0 4 879 209 238 314 10 chr15 38660935 38661037 -64833937 + MIRc SINE MIR 91 223 -45 4 879 423 0 0 0 chr15 38661444 38661491 -64833483 + (TC)n Simple_repeat Simple_repeat 1 47 0 4 879 297 0 0 0 chr15 38661491 38661523 -64833451 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 879 1143 82 7 0 chr15 38661642 38661788 -64833186 - B1_Mus1 SINE Alu -1 147 1 4 879 369 0 0 0 chr15 38661888 38661929 -64833045 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 879 1070 190 60 0 chr15 38662812 38663012 -64831962 - B3 SINE B2 -2 214 3 4 879 345 208 0 0 chr15 38663065 38663142 -64831832 + (TG)n Simple_repeat Simple_repeat 1 77 0 4 879 771 273 82 52 chr15 38663143 38663410 -64831564 + MLT1A0 LTR MaLR 35 309 -56 4 879 414 298 87 62 chr15 38663834 38663995 -64830979 + B4A SINE B4 47 211 -81 4 880 4726 79 26 2 chr15 38715270 38715894 -64779080 + L1_Mus3 LINE L1 5998 6636 -2 4 880 201 74 0 0 chr15 38716217 38716244 -64778730 + (TC)n Simple_repeat Simple_repeat 1 27 0 4 880 1319 57 11 0 chr15 38716244 38716420 -64778554 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 4 880 1211 42 0 20 chr15 38716430 38716576 -64778398 - B1_Mus1 SINE Alu -4 144 2 4 880 1217 304 71 40 chr15 38717219 38717641 -64777333 + MLT1C LTR MaLR 32 466 -1 4 880 306 73 0 0 chr15 38717761 38717802 -64777172 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 880 351 0 0 0 chr15 38717802 38717840 -64777134 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 880 591 259 96 57 chr15 38717877 38718086 -64776888 + ID_B1 SINE B4 1 217 -7 4 880 261 280 117 17 chr15 38718122 38718242 -64776732 - MIRb SINE MIR -107 161 30 4 880 417 228 143 110 chr15 38718562 38718744 -64776230 + B3A SINE B2 1 188 -10 4 880 2320 151 21 45 chr15 38718999 38719337 -64775637 - MTC LTR MaLR -8 413 76 4 880 951 134 116 0 chr15 38719337 38719399 -64775575 - B2_Mm2 SINE B2 0 195 131 4 880 360 0 0 0 chr15 38719399 38719439 -64775535 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 880 951 134 116 0 chr15 38719439 38719548 -64775426 - B2_Mm2 SINE B2 -65 130 5 4 880 2320 151 21 45 chr15 38719548 38719632 -64775342 - MTC LTR MaLR -346 75 1 4 880 326 276 82 13 chr15 38719844 38720002 -64774972 - L1M6 LINE L1 -6313 183 15 4 880 1134 68 14 0 chr15 38720894 38721041 -64773933 + B1_Mur4 SINE Alu 2 150 0 4 880 198 0 0 0 chr15 38721041 38721063 -64773911 + (A)n Simple_repeat Simple_repeat 1 22 0 4 880 342 198 0 165 chr15 38721063 38721166 -64773808 + MT2B LTR ERVL 155 240 -361 4 880 712 225 14 0 chr15 38721087 38721229 -64773745 + B1_Mur4 SINE Alu 7 150 0 4 880 272 254 0 101 chr15 38721503 38721582 -64773392 - B1_Mur4 SINE Alu -5 145 75 4 880 213 211 0 0 chr15 38721715 38721772 -64773202 + CT-rich Low_complexity Low_complexity 2 58 0 4 880 573 231 9 0 chr15 38721793 38721901 -64773073 - B1_Mus2 SINE Alu -38 109 1 4 880 375 273 52 15 chr15 38722904 38723038 -64771936 - MER58B DNA MER1_type -19 322 184 4 880 461 136 23 0 chr15 38723109 38723197 -64771777 + (TATG)n Simple_repeat Simple_repeat 1 90 0 4 880 537 237 57 34 chr15 38723198 38723373 -64771601 - B3A SINE B2 -17 181 3 4 880 1004 78 50 0 chr15 38723784 38723925 -64771049 + B1_Mus1 SINE Alu 1 148 0 4 880 223 80 19 39 chr15 38723925 38723977 -64770997 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 4 880 627 184 9 9 chr15 38723991 38724106 -64770868 - B1_Mur1 SINE Alu -27 122 8 4 880 258 105 0 0 chr15 38724938 38724976 -64769998 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 880 1447 78 11 0 chr15 38725366 38725557 -64769417 - B2_Mm1t SINE B2 0 193 1 4 880 249 260 67 48 chr15 38725740 38725845 -64769129 - MARNA DNA Mariner -194 392 286 4 880 269 255 161 9 chr15 38726168 38726313 -64768661 - LTR40b LTR ERVL -5 457 308 4 880 500 205 19 6 chr15 38726373 38726535 -64768439 + (TG)n Simple_repeat Simple_repeat 2 165 0 4 880 764 177 7 7 chr15 38727201 38727343 -64767631 + B1_Mus2 SINE Alu 4 145 -2 4 880 251 211 18 0 chr15 38727651 38727708 -64767266 + B1_Mus1 SINE Alu 4 61 -87 4 880 942 257 63 22 chr15 38727723 38727994 -64766980 + B4A SINE B4 1 282 -10 4 880 391 228 0 0 chr15 38728040 38728119 -64766855 + ID_B1 SINE B4 142 220 -4 4 880 1949 124 71 143 chr15 38728684 38729037 -64765937 - ORR1B1 LTR MaLR 0 394 53 4 880 1260 20 0 13 chr15 38729037 38729186 -64765788 + B1_Mus2 SINE Alu 1 147 0 4 880 1949 124 71 143 chr15 38729186 38729257 -64765717 - ORR1B1 LTR MaLR -342 52 1 4 880 1250 83 0 11 chr15 38729398 38729580 -64765394 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 4 880 370 255 9 5 chr15 38730119 38730224 -64764750 + B1_Mur2 SINE Alu 3 104 -45 4 880 347 224 120 0 chr15 38730955 38731080 -64763894 - Lx9 LINE L1 0 7644 7505 4 880 1681 262 47 33 chr15 38731079 38731592 -64763382 - Lx9 LINE L1 -289 7355 6836 4 880 24 0 0 0 chr15 38732128 38732152 -64762822 + AT_rich Low_complexity Low_complexity 1 24 0 4 880 2135 152 64 109 chr15 38732168 38732654 -64762320 + MYSERV6-int LTR ERVK 8496 8959 0 4 880 439 283 60 39 chr15 38732663 38732895 -64762079 + RLTR12B LTR ERVK 10 246 -282 4 880 1447 209 13 32 chr15 38732917 38733297 -64761677 - MYSERV6-int LTR ERVK -875 5675 5303 4 880 226 220 141 35 chr15 38733297 38733382 -64761592 - RMER4A LTR ERVK -27 439 346 4 880 448 280 15 29 chr15 38733387 38733523 -64761451 - RMER4A LTR ERVK -79 387 254 4 880 12816 269 63 46 chr15 38733525 38734048 -64760926 - MYSERV6-int LTR ERVK -1423 5127 4612 4 880 2542 72 18 0 chr15 38734048 38734380 -64760594 + L1_Mus1 LINE L1 6230 6567 0 4 880 14945 249 36 29 chr15 38734380 38738750 -64756224 - MYSERV6-int LTR ERVK -4344 4615 238 4 880 292 280 37 9 chr15 38739211 38739319 -64755655 - RLTR15 LTR ERVK -68 291 181 4 880 889 129 7 0 chr15 38739565 38739704 -64755270 - ORR1B1 LTR MaLR 0 394 255 4 880 2227 168 87 17 chr15 38739708 38740180 -64754794 + RMER19B LTR ERVK 10 514 -388 4 880 1125 96 30 15 chr15 38740174 38740374 -64754600 - ORR1B1 LTR MaLR -191 203 1 4 880 1315 210 139 93 chr15 38740463 38740968 -64754006 - RLTR11A LTR ERVK 0 528 1 4 880 237 281 206 39 chr15 38742227 38742431 -64752543 - L2a LINE L2 -5 3421 3184 4 880 673 189 81 0 chr15 38742674 38742822 -64752152 + ORR1D1 LTR MaLR 1 160 -214 4 880 1021 117 14 0 chr15 38743137 38743282 -64751692 + B1_Mus1 SINE Alu 2 148 0 4 880 200 59 29 0 chr15 38743293 38743327 -64751647 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 880 724 238 0 113 chr15 38743483 38743640 -64751334 + ORR1D1 LTR MaLR 171 314 -60 4 880 1024 66 79 21 chr15 38743640 38743780 -64751194 - B1_Mus1 SINE Alu 0 148 1 4 880 724 238 0 113 chr15 38743780 38743835 -64751139 + ORR1D1 LTR MaLR 315 359 -15 4 880 503 243 10 0 chr15 38745298 38745401 -64749573 + RSINE1 SINE B4 62 165 0 4 880 333 62 0 0 chr15 38745407 38745455 -64749519 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 880 457 269 131 77 chr15 38745895 38746169 -64748805 + B4A SINE B4 2 290 -2 5 880 375 240 22 58 chr15 38746560 38746697 -64748277 + MER20 DNA MER1_type 20 151 -68 5 880 229 299 76 42 chr15 38746879 38747116 -64747858 - LTR88b LTR Gypsy? -580 257 13 5 880 324 169 57 44 chr15 38747280 38747389 -64747585 + Lx4A LINE L1 6924 7055 -3 5 880 25 0 0 0 chr15 38747391 38747416 -64747558 + AT_rich Low_complexity Low_complexity 1 25 0 5 880 216 0 0 0 chr15 38748004 38748028 -64746946 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 5 880 644 215 33 9 chr15 38748028 38748170 -64746804 - ID_B1 SINE B4 -13 211 70 5 880 180 0 0 0 chr15 38748460 38748480 -64746494 + (T)n Simple_repeat Simple_repeat 1 20 0 5 880 1256 20 7 0 chr15 38748480 38748626 -64746348 - B1_Mus2 SINE Alu 0 147 1 5 880 488 295 13 7 chr15 38749680 38749830 -64745144 + RSINE1 SINE B4 5 155 -10 5 880 1461 230 86 11 chr15 38750180 38750553 -64744421 - MTD LTR MaLR 0 419 19 5 880 505 230 0 0 chr15 38750777 38750877 -64744097 - B1_Mur1 SINE Alu -1 148 49 5 880 226 290 14 0 chr15 38751871 38751940 -64743034 - MIRb SINE MIR -90 178 109 5 880 216 276 109 45 chr15 38751944 38752054 -64742920 + MIRb SINE MIR 6 122 -146 5 880 939 277 17 73 chr15 38752446 38752746 -64742228 - B4A SINE B4 -2 290 8 5 880 316 276 92 49 chr15 38753152 38753390 -64741584 - MLT1A1 LTR MaLR -74 291 41 5 880 323 200 70 5 chr15 38753469 38753553 -64741421 + MLT1A1 LTR MaLR 276 395 -13 5 880 473 281 143 65 chr15 38753799 38754247 -64740727 - RLTR18 LTR ERVK -5 507 25 5 880 228 300 14 0 chr15 38755689 38755759 -64739215 - B3A SINE B2 -127 71 1 5 880 1053 229 52 9 chr15 38755907 38756192 -64738782 - Lx2B LINE L1 -86 6914 6657 5 880 1171 67 0 26 chr15 38756455 38756609 -64738365 + B1_Mur4 SINE Alu 1 150 0 5 880 255 266 58 29 chr15 38756755 38756952 -64738022 - L1M5 LINE L1 -555 5639 5433 5 880 865 324 37 14 chr15 38757378 38757732 -64737242 - MLT1A0 LTR MaLR -3 362 1 5 880 904 83 15 0 chr15 38758330 38758463 -64736511 + B1_Mus1 SINE Alu 14 148 0 5 880 1944 274 82 116 chr15 38758666 38759454 -64735520 - Lx5 LINE L1 -18 7032 6271 5 880 745 236 36 0 chr15 38759451 38759616 -64735358 + Lx6 LINE L1 6078 6248 -1212 5 880 297 0 0 0 chr15 38759622 38759655 -64735319 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 5 880 1137 87 0 0 chr15 38759655 38759816 -64735158 - B2_Mm2 SINE B2 -34 161 1 5 880 1078 170 73 0 chr15 38760323 38760529 -64734445 - URR1B DNA MER1_type 0 225 5 5 880 522 311 143 19 chr15 38760848 38761272 -64733702 - L1MB7 LINE L1 -14 6170 5695 5 880 1019 296 37 40 chr15 38761272 38761354 -64733620 - MTEb LTR MaLR 0 379 305 5 880 2551 132 101 36 chr15 38761354 38761849 -64733125 - RLTR11A2 LTR ERVK 0 527 1 5 880 1019 296 37 40 chr15 38761849 38762146 -64732828 - MTEb LTR MaLR -75 304 3 5 880 1158 237 153 18 chr15 38762387 38762843 -64732131 - L1MB7 LINE L1 -768 5378 4861 5 880 211 294 132 16 chr15 38763731 38763852 -64731122 + MER5A DNA MER1_type 50 184 -5 5 880 202 256 52 62 chr15 38764060 38764156 -64730818 + MIRb SINE MIR 151 245 -23 5 880 421 262 15 53 chr15 38764535 38764668 -64730306 + MER45C DNA Tip100 25 152 -801 5 880 253 309 137 20 chr15 38765030 38765278 -64729696 + L1M5 LINE L1 5628 5904 -220 5 880 328 155 28 0 chr15 38766197 38766268 -64728706 + CT-rich Low_complexity Low_complexity 1 73 0 5 880 291 246 14 14 chr15 38767422 38767492 -64727482 + ID SINE ID 2 71 -153 5 880 448 58 29 0 chr15 38767569 38767638 -64727336 + LTRIS3 LTR ERV1 442 512 0 5 880 345 346 71 6 chr15 38767663 38767846 -64727128 + Tigger5 DNA MER2_type 42 236 -2170 5 880 2936 46 7 7 chr15 38768372 38768785 -64726189 + BGLII LTR ERVK 9 421 0 5 880 330 234 13 0 chr15 38769333 38769410 -64725564 + B3A SINE B2 1 78 -120 5 880 2299 156 43 39 chr15 38769422 38769882 -64725092 + RLTR18B LTR ERVK 1 462 -50 5 880 407 204 185 0 chr15 38769920 38770028 -64724946 + B3 SINE B2 89 216 0 5 880 1046 115 0 6 chr15 38770846 38770900 -64724074 + (TTC)n Simple_repeat Simple_repeat 1 54 0 5 880 1536 22 0 0 chr15 38770900 38771080 -64723894 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 5 880 1046 115 0 6 chr15 38771080 38771191 -64723783 + (TTC)n Simple_repeat Simple_repeat 1 111 0 5 880 1031 86 0 41 chr15 38771191 38771337 -64723637 - B1_Mus2 SINE Alu -6 141 2 5 880 235 273 171 62 chr15 38771600 38771811 -64723163 - MIRb SINE MIR -26 242 9 5 880 191 204 19 0 chr15 38772091 38772145 -64722829 + CT-rich Low_complexity Low_complexity 1 55 0 5 880 679 249 22 2 chr15 38772145 38772307 -64722667 - ID_B1 SINE B4 -46 246 80 5 880 336 198 209 38 chr15 38772829 38772934 -64722040 - B1F SINE Alu 0 149 27 5 880 30 0 0 0 chr15 38773040 38773070 -64721904 + AT_rich Low_complexity Low_complexity 1 30 0 5 880 294 95 0 0 chr15 38773094 38773136 -64721838 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 5 880 429 226 10 21 chr15 38773138 38773252 -64721722 - PB1D9 SINE Alu -3 117 7 5 880 489 243 20 41 chr15 38773295 38773441 -64721533 - ID_B1 SINE B4 0 224 82 5 880 568 256 128 148 chr15 38774357 38774723 -64720251 - ORR1E LTR MaLR 0 359 1 5 880 183 100 0 0 chr15 38774791 38774821 -64720153 + (C)n Simple_repeat Simple_repeat 1 30 0 5 880 455 248 222 0 chr15 38774842 38774959 -64720015 + RSINE1 SINE B4 3 145 -20 5 880 626 288 97 54 chr15 38775729 38776008 -64718966 + B4A SINE B4 2 292 0 5 880 506 187 7 0 chr15 38776008 38776163 -64718811 + (CA)n Simple_repeat Simple_repeat 1 156 0 5 880 891 0 10 0 chr15 38776558 38776662 -64718312 - L1_Mm LINE L1 -1643 4240 4136 5 880 2720 43 18 0 chr15 38776662 38776990 -64717984 + L1Md_T LINE L1 6249 6582 0 5 880 621 147 35 0 chr15 38777006 38777176 -64717798 + (TAGA)n Simple_repeat Simple_repeat 4 179 0 5 880 784 148 13 0 chr15 38777383 38777538 -64717436 + (TCCA)n Simple_repeat Simple_repeat 1 157 0 5 880 264 366 129 22 chr15 38777643 38777875 -64717099 - LTR16A1 LTR ERVL -2 454 198 5 880 1025 89 0 32 chr15 38777941 38778127 -64716847 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 880 836 226 116 49 chr15 38778533 38778878 -64716096 - RMER13A LTR ERVK -395 465 98 5 880 423 56 0 0 chr15 38779143 38779197 -64715777 + (TC)n Simple_repeat Simple_repeat 1 54 0 5 880 1174 35 0 14 chr15 38779197 38779344 -64715630 - B1_Mm SINE Alu -1 146 2 5 880 366 216 41 41 chr15 38779345 38779466 -64715508 + MamRep137 DNA TcMar? 175 295 -149 5 880 229 322 88 11 chr15 38779703 38779794 -64715180 - LTR16A1 LTR ERVL -275 176 79 5 880 504 218 0 10 chr15 38780087 38780189 -64714785 - MIRb SINE MIR -39 229 129 5 880 195 184 0 0 chr15 38781321 38781359 -64713615 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 880 180 0 0 0 chr15 38782647 38782667 -64712307 + (GGGA)n Simple_repeat Simple_repeat 4 23 0 5 880 254 301 72 16 chr15 38783814 38783939 -64711035 + MLT1J LTR MaLR 333 464 -48 5 880 255 240 122 20 chr15 38784618 38784716 -64710258 - MER34 LTR ERV1 -335 207 100 5 880 510 254 68 87 chr15 38784767 38784974 -64710000 - B3 SINE B2 -13 203 1 5 880 833 238 24 0 chr15 38784976 38785186 -64709788 - B4 SINE B4 -67 225 11 5 880 305 207 17 0 chr15 38785232 38785290 -64709684 - ID_B1 SINE B4 -13 211 153 5 880 236 333 35 26 chr15 38785657 38785771 -64709203 + LTR16C LTR ERVL 257 371 -118 5 880 534 234 258 0 chr15 38786407 38786574 -64708400 + ID_B1 SINE B4 2 211 -13 5 880 846 233 24 0 chr15 38786614 38786824 -64708150 + B4 SINE B4 11 225 -67 5 880 530 242 63 94 chr15 38786826 38787049 -64707925 + B3 SINE B2 1 216 0 5 880 478 271 113 25 chr15 38787355 38787559 -64707415 + RMER20B LTR ERVK 142 363 -264 5 880 409 194 0 32 chr15 38787722 38787908 -64707066 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 880 256 277 144 6 chr15 38788141 38788301 -64706673 + MIRb SINE MIR 29 210 -58 5 880 259 261 108 11 chr15 38788491 38788584 -64706390 - MIRm SINE MIR -173 103 2 5 880 389 231 32 32 chr15 38788907 38789001 -64705973 + PB1 SINE Alu 34 127 0 5 880 219 331 97 8 chr15 38789049 38789183 -64705791 + MIR SINE MIR 86 231 -31 5 880 328 292 91 61 chr15 38791481 38791711 -64703263 - L2 LINE L2 -771 2648 2412 5 880 973 133 0 20 chr15 38791890 38792043 -64702931 - B1_Mur4 SINE Alu 0 150 1 5 880 1525 214 109 8 chr15 38793484 38793861 -64701113 - MTD LTR MaLR -4 415 1 5 880 1684 152 53 6 chr15 38794434 38794772 -64700202 + RLTR15 LTR ERVK 6 359 0 5 880 591 261 32 53 chr15 38795485 38795675 -64699299 - B3A SINE B2 -11 205 20 5 880 274 239 56 0 chr15 38795728 38795799 -64699175 - PB1D7 SINE Alu -10 110 36 5 880 266 233 33 16 chr15 38796637 38796698 -64698276 + B1_Mur4 SINE Alu 5 66 -84 5 880 1034 122 29 19 chr15 38796801 38797006 -64697968 - B2_Mm2 SINE B2 -4 212 2 5 881 804 249 16 0 chr15 38797948 38798137 -64696837 - B3A SINE B2 0 198 7 5 881 182 301 11 46 chr15 38800352 38800439 -64694535 + L4 LINE RTE 1669 1752 -277 5 881 208 191 21 21 chr15 38801129 38801177 -64693797 + GA-rich Low_complexity Low_complexity 3 50 0 5 881 265 391 98 71 chr15 38801892 38802288 -64692686 + MamGypLTR2b LTR Gypsy 140 546 -376 5 881 269 289 45 71 chr15 38802793 38802905 -64692069 + MER81 DNA AcHobo 2 110 -4 6 881 669 196 117 7 chr15 38803122 38803276 -64691698 + B3 SINE B2 45 215 -1 6 881 1257 126 33 0 chr15 38804511 38804694 -64690280 - B2_Mm2 SINE B2 -6 189 1 6 881 959 206 49 0 chr15 38804718 38804922 -64690052 - B3 SINE B2 -1 215 2 6 881 201 39 0 0 chr15 38805043 38805069 -64689905 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 6 881 256 310 0 0 chr15 38806007 38806078 -64688896 + RSINE1 SINE B4 3 73 -92 6 881 1340 31 33 11 chr15 38806078 38806961 -64688013 + (CTGTG)n Simple_repeat Simple_repeat 1 902 0 6 881 997 288 151 82 chr15 38807099 38807810 -64687164 + RMER13A LTR ERVK 1 760 -100 6 881 373 291 73 73 chr15 38808284 38808573 -64686401 - MER57-int LTR ERV1 -2048 5489 5201 6 881 871 168 32 53 chr15 38809425 38809614 -64685360 + B3 SINE B2 3 187 -29 6 881 495 0 0 0 chr15 38809614 38809669 -64685305 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 881 609 211 30 24 chr15 38811188 38811353 -64683621 - MER5A DNA MER1_type 0 189 24 6 881 612 280 13 0 chr15 38811475 38811625 -64683349 + RSINE1 SINE B4 1 152 -13 6 881 2330 147 46 8 chr15 38812029 38812543 -64682431 + RMER4B LTR ERVK 13 585 0 6 881 261 125 0 0 chr15 38812795 38812835 -64682139 - MTC LTR MaLR 0 421 382 6 881 720 229 65 83 chr15 38812860 38812907 -64682067 - RLTR20B3 LTR ERVK -28 500 459 6 881 492 18 0 0 chr15 38812907 38812964 -64682010 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 881 1086 232 32 79 chr15 38812964 38813445 -64681529 - RLTR20B3 LTR ERVK -106 471 2 6 881 2317 139 5 13 chr15 38813452 38813837 -64681137 - MTC LTR MaLR -39 382 1 6 881 333 229 72 0 chr15 38813858 38813941 -64681033 - B3A SINE B2 -109 89 1 6 881 292 318 82 98 chr15 38813996 38814324 -64680650 - ORR1E LTR MaLR -5 354 32 6 881 2772 158 197 14 chr15 38814399 38814972 -64680002 - RLTR33 LTR ERVK 0 678 1 6 881 22 35 0 0 chr15 38815232 38815261 -64679713 + AT_rich Low_complexity Low_complexity 1 29 0 6 881 520 232 65 77 chr15 38815266 38815434 -64679540 + B3A SINE B2 27 192 -6 6 881 1257 77 0 0 chr15 38815437 38815607 -64679367 + (GAAA)n Simple_repeat Simple_repeat 4 173 0 6 881 751 276 165 47 chr15 38815975 38816314 -64678660 + MTEa LTR MaLR 1 379 0 6 881 234 319 106 16 chr15 38816541 38816729 -64678245 - LTR33A LTR ERVL -8 512 308 6 881 307 281 145 24 chr15 38817081 38817205 -64677769 + B1F SINE Alu 1 139 -10 6 881 318 67 0 0 chr15 38817710 38817755 -64677219 + (T)n Simple_repeat Simple_repeat 1 45 0 6 881 935 206 33 28 chr15 38818633 38818848 -64676126 - B3 SINE B2 0 216 1 6 881 217 339 182 6 chr15 38819436 38819617 -64675357 - MIRb SINE MIR -24 244 32 6 881 1446 186 97 3 chr15 38819641 38819960 -64675014 - ORR1D1 LTR MaLR -25 349 1 6 881 1019 191 30 5 chr15 38820880 38821080 -64673894 - B3 SINE B2 -10 206 2 6 881 342 107 18 0 chr15 38821140 38821196 -64673778 - L1MC2 LINE L1 -11 6333 6277 6 881 299 188 141 0 chr15 38821300 38821311 -64673663 - B1_Mur2 SINE Alu 0 149 139 6 881 194 0 0 37 chr15 38821311 38821338 -64673636 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 6 881 299 201 133 12 chr15 38821338 38821436 -64673538 - B1_Mur2 SINE Alu -11 138 34 6 881 306 0 0 0 chr15 38824102 38824136 -64670838 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 6 881 22 0 0 0 chr15 38824288 38824310 -64670664 + AT_rich Low_complexity Low_complexity 1 22 0 6 881 2825 149 34 44 chr15 38824470 38824975 -64669999 - Lx6 LINE L1 -472 6988 6489 6 881 1601 225 10 3 chr15 38824969 38825263 -64669711 + Lx6 LINE L1 6996 7291 -169 6 881 274 281 54 33 chr15 38825346 38825438 -64669536 + Lx7 LINE L1 7205 7298 -398 6 881 506 193 27 9 chr15 38825692 38825802 -64669172 - B1_Mur1 SINE Alu -1 148 37 6 881 1249 271 34 93 chr15 38826060 38826421 -64668553 - MT2A LTR ERVL -2 531 189 6 881 836 60 48 12 chr15 38826421 38826589 -64668385 + (CA)n Simple_repeat Simple_repeat 2 175 0 6 881 1249 271 34 93 chr15 38826589 38826605 -64668369 - MT2A LTR ERVL -345 188 182 6 881 366 49 32 16 chr15 38826605 38826667 -64668307 + (CA)n Simple_repeat Simple_repeat 1 63 0 6 881 1249 271 34 93 chr15 38826667 38826813 -64668161 - MT2A LTR ERVL -352 181 38 6 881 375 289 93 8 chr15 38826700 38826829 -64668145 - MTE2b LTR MaLR -220 159 20 6 881 440 265 64 12 chr15 38826905 38827077 -64667897 - L1MA9 LINE L1 -7 6305 6125 6 881 1147 69 7 0 chr15 38827077 38827222 -64667752 + B1_Mus1 SINE Alu 2 147 -1 6 881 234 120 29 48 chr15 38827223 38827328 -64667646 + A-rich Low_complexity Low_complexity 3 105 0 6 881 265 283 123 13 chr15 38827350 38827504 -64667470 - L1MA9 LINE L1 -209 6103 5933 6 881 1528 290 93 12 chr15 38827850 38828408 -64666566 + MTE2b-int LTR MaLR 976 1578 -2 6 881 1181 257 99 0 chr15 38828421 38828744 -64666230 + MTE2b LTR MaLR 9 363 -16 6 881 362 219 50 0 chr15 38828750 38828880 -64666094 - L1M3 LINE L1 -1480 4663 4515 6 881 255 291 50 25 chr15 38829725 38829845 -64665129 - Zaphod DNA Tip100 -205 3826 3704 6 881 698 205 7 36 chr15 38829847 38829984 -64664990 + B1_Mur3 SINE Alu 5 137 -12 6 881 267 31 0 0 chr15 38829984 38830016 -64664958 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 6 881 1346 220 21 70 chr15 38830054 38830066 -64664908 - ORR1D2 LTR MaLR 0 370 364 6 881 2058 157 24 58 chr15 38830066 38830446 -64664528 + ORR1B2 LTR MaLR 1 367 0 6 881 1346 220 21 70 chr15 38830446 38830819 -64664155 - ORR1D2 LTR MaLR -7 363 4 6 881 406 300 27 0 chr15 38830866 38830976 -64663998 - PB1D7 SINE Alu -7 113 1 6 881 238 246 0 0 chr15 38831084 38831141 -64663833 - tRNA-Ala-GCY_ tRNA tRNA -15 60 4 6 881 437 249 141 29 chr15 38831216 38831386 -64663588 + L1MCa LINE L1 267 455 -6053 6 881 270 257 28 14 chr15 38831509 38831580 -64663394 + RSINE1 SINE B4 55 126 -39 6 881 1035 316 94 8 chr15 38831868 38832401 -64662573 + L1MCa LINE L1 466 1044 -5464 6 881 773 220 79 6 chr15 38832401 38832579 -64662395 + B3 SINE B2 1 191 -25 6 881 738 206 152 42 chr15 38832585 38832738 -64662236 + L1MCa LINE L1 1013 1174 -5334 6 881 2403 113 0 0 chr15 38832738 38833065 -64661909 + ORR1A2 LTR MaLR 1 327 0 6 881 738 206 152 42 chr15 38833065 38833200 -64661774 + L1MCa LINE L1 1175 1333 -5175 6 881 416 259 113 21 chr15 38833210 38833352 -64661622 + L1MC LINE L1 3576 3730 -2416 6 881 518 233 135 25 chr15 38833800 38833963 -64661011 + B3A SINE B2 2 182 -16 6 881 1694 143 49 9 chr15 38833992 38834317 -64660657 + ORR1B1 LTR MaLR 12 349 -45 6 881 485 170 5 24 chr15 38834321 38834458 -64660516 + B3 SINE B2 2 216 0 6 881 385 114 0 54 chr15 38834459 38834533 -64660441 + ORR1B1 LTR MaLR 325 394 0 6 881 745 211 58 16 chr15 38834568 38834756 -64660218 + B3 SINE B2 6 201 -15 6 881 678 205 221 0 chr15 38834805 38834995 -64659979 + L1MC LINE L1 3778 4009 -2137 6 881 414 0 0 0 chr15 38834998 38835044 -64659930 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 6 881 333 272 29 10 chr15 38835108 38835212 -64659762 + L1MCa LINE L1 1528 1633 -4875 6 881 197 303 89 16 chr15 38835324 38835448 -64659526 - MIR SINE MIR -124 138 6 6 881 2349 217 25 62 chr15 38835641 38836275 -64658699 - RMER19C LTR ERVK 0 611 1 6 881 455 288 24 0 chr15 38836379 38836504 -64658470 - B1F2 SINE Alu -21 128 1 6 881 516 148 278 0 chr15 38836725 38836840 -64658134 - B1_Mus2 SINE Alu 0 147 1 6 881 278 188 42 99 chr15 38837018 38837089 -64657885 + ID4_ SINE ID 3 69 -14 6 881 727 102 22 14 chr15 38837093 38837232 -64657742 + (GAA)n Simple_repeat Simple_repeat 1 140 0 6 881 28 79 0 0 chr15 38837730 38837793 -64657181 + GC_rich Low_complexity Low_complexity 1 63 0 6 881 21 57 0 0 chr15 38837987 38838022 -64656952 + GC_rich Low_complexity Low_complexity 1 35 0 6 881 26 0 0 0 chr15 38839395 38839421 -64655553 + AT_rich Low_complexity Low_complexity 1 26 0 6 881 755 93 120 30 chr15 38839426 38839559 -64655415 - B1_Mus2 SINE Alu -1 146 2 6 881 234 270 27 0 chr15 38840306 38840380 -64654594 - ID4_ SINE ID -6 77 2 6 881 274 231 67 26 chr15 38841053 38841190 -64653784 - B1F SINE Alu -8 141 1 6 881 370 256 78 63 chr15 38841197 38841339 -64653635 - B1F SINE Alu 0 149 6 6 881 571 243 66 26 chr15 38841449 38841601 -64653373 - RSINE1 SINE B4 0 165 8 6 881 196 200 25 0 chr15 38841698 38841738 -64653236 + MER5A DNA MER1_type 1 41 -148 6 881 639 285 81 25 chr15 38841832 38842030 -64652944 - MER58A DNA MER1_type -9 215 7 6 881 23 0 0 0 chr15 38842127 38842150 -64652824 + AT_rich Low_complexity Low_complexity 1 23 0 6 881 931 251 36 20 chr15 38842150 38842398 -64652576 - B4A SINE B4 0 292 41 6 881 1421 172 47 63 chr15 38842411 38842776 -64652198 + ORR1D1 LTR MaLR 1 359 -15 6 881 656 258 0 0 chr15 38842776 38842904 -64652070 - B1_Mur1 SINE Alu -17 132 5 6 881 5346 84 60 0 chr15 38843756 38844483 -64650491 + L1VL2 LINE L1 153 923 -5412 6 881 1107 170 4 89 chr15 38845104 38845350 -64649624 + URR1B DNA MER1_type 1 225 0 6 881 697 197 206 11 chr15 38845610 38845790 -64649184 - B3 SINE B2 0 216 2 6 881 192 247 54 86 chr15 38845962 38846055 -64648919 - L2a LINE L2 0 3426 3337 6 881 342 330 77 16 chr15 38846601 38846795 -64648179 - ERVL-E-int LTR ERVL -1556 4111 3906 6 881 207 214 35 35 chr15 38847662 38847720 -64647254 - MER5A DNA MER1_type -125 64 7 6 881 817 108 8 30 chr15 38848004 38848138 -64646836 + B2_Mm2 SINE B2 4 134 -61 6 881 181 0 0 65 chr15 38849116 38849147 -64645827 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 881 195 333 41 20 chr15 38849633 38849731 -64645243 - MIR3 SINE MIR -37 171 72 6 881 26 64 0 0 chr15 38850888 38850935 -64644039 + AT_rich Low_complexity Low_complexity 1 47 0 6 881 4150 163 116 35 chr15 38851535 38852534 -64642440 - L1_Mur3 LINE L1 -6631 1081 2 6 881 591 124 14 7 chr15 38853483 38853629 -64641345 + (TG)n Simple_repeat Simple_repeat 2 148 0 6 881 581 303 11 17 chr15 38853630 38853811 -64641163 - B3A SINE B2 -16 182 3 6 881 3167 218 32 90 chr15 38854359 38855278 -64639696 - Lx7 LINE L1 0 7696 6832 6 881 339 284 56 14 chr15 38855300 38855443 -64639531 - HAL1 LINE L1 -833 1674 1526 6 881 304 290 36 27 chr15 38855616 38855726 -64639248 - L2a LINE L2 -39 3387 3277 7 881 489 239 110 19 chr15 38856044 38856253 -64638721 - L2a LINE L2 -658 2761 2534 7 881 355 250 39 71 chr15 38856807 38856962 -64638012 + L2a LINE L2 3277 3426 0 7 881 310 378 0 31 chr15 38857619 38857755 -64637219 - L2b LINE L2 -237 3138 3005 7 881 364 316 9 0 chr15 38857755 38857869 -64637105 + PB1D10 SINE Alu 1 115 -2 7 881 310 378 0 31 chr15 38857869 38857926 -64637048 - L2b LINE L2 -371 3004 2951 7 881 779 218 138 5 chr15 38858856 38859045 -64635929 + B3 SINE B2 1 214 -2 7 881 549 198 9 0 chr15 38860437 38860543 -64634431 + B3A SINE B2 1 107 -91 7 881 474 236 49 0 chr15 38860741 38860864 -64634110 + B1F1 SINE Alu 1 129 -20 7 881 666 262 13 0 chr15 38861260 38861409 -64633565 - RSINE1 SINE B4 -13 152 2 7 881 848 169 7 0 chr15 38861868 38862010 -64632964 - B1_Mur1 SINE Alu -6 143 1 7 881 209 184 0 26 chr15 38862016 38862055 -64632919 + polypyrimidine Low_complexity Low_complexity 1 38 0 7 881 363 171 78 22 chr15 38862206 38862296 -64632678 + Lx8 LINE L1 7377 7471 -2 7 881 25 0 0 0 chr15 38862298 38862323 -64632651 + AT_rich Low_complexity Low_complexity 1 25 0 7 881 305 213 26 13 chr15 38864006 38864082 -64630892 + PB1D10 SINE Alu 36 112 -5 7 881 838 128 0 28 chr15 38864200 38864377 -64630597 + CT-rich Low_complexity Low_complexity 4 175 0 7 881 22 35 0 0 chr15 38864645 38864674 -64630300 + AT_rich Low_complexity Low_complexity 1 29 0 7 881 734 259 59 10 chr15 38864836 38865039 -64629935 - B3 SINE B2 -3 213 1 7 881 249 139 0 0 chr15 38865719 38865762 -64629212 + (CATA)n Simple_repeat Simple_repeat 2 44 0 7 881 366 208 74 124 chr15 38867066 38867187 -64627787 + PB1D10 SINE Alu 1 115 -2 7 881 207 0 0 0 chr15 38867334 38867357 -64627617 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 881 654 165 0 34 chr15 38867523 38867642 -64627332 - B1_Mus2 SINE Alu -31 116 2 7 881 324 266 0 0 chr15 38868182 38868261 -64626713 + ID4 SINE ID 2 80 -3 7 881 950 110 14 14 chr15 38868345 38868357 -64626617 - B1_Mur4 SINE Alu -2 148 138 7 881 246 32 0 0 chr15 38868357 38868388 -64626586 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 7 881 950 110 14 14 chr15 38868388 38868522 -64626452 - B1_Mur4 SINE Alu -13 137 2 7 881 218 208 140 40 chr15 38869194 38869294 -64625680 - B1_Mur4 SINE Alu 0 150 41 7 881 319 328 45 8 chr15 38870394 38870526 -64624448 - ID_B1 SINE B4 -4 220 84 7 881 879 192 112 0 chr15 38870542 38870729 -64624245 + B3 SINE B2 1 208 -8 7 881 675 209 21 21 chr15 38870763 38870905 -64624069 + B1_Mm SINE Alu 2 143 -4 7 881 198 0 0 0 chr15 38870905 38870927 -64624047 + (G)n Simple_repeat Simple_repeat 1 22 0 7 881 2581 198 154 10 chr15 38870940 38871531 -64623443 - RLTR33 LTR ERVK -2 676 1 7 881 1014 226 163 0 chr15 38872414 38872671 -64622303 + RMER1B Other Other 44 342 -724 7 881 818 145 144 6 chr15 38872665 38872825 -64622149 + RMER1B Other Other 881 1062 -4 7 881 623 250 76 0 chr15 38873135 38873307 -64621667 + B3 SINE B2 26 210 -6 7 881 351 62 0 0 chr15 38874490 38874512 -64620462 + (A)n Simple_repeat Simple_repeat 1 22 0 7 881 1170 75 0 0 chr15 38874512 38874659 -64620315 + B1_Mus2 SINE Alu 1 147 0 7 881 351 62 0 0 chr15 38874659 38874684 -64620290 + (A)n Simple_repeat Simple_repeat 1 25 0 7 881 353 310 0 0 chr15 38874684 38874771 -64620203 - PB1D7 SINE Alu -13 107 21 7 881 879 130 210 5 chr15 38875405 38875591 -64619383 + URR1A DNA MER1_type 3 226 0 7 881 485 221 0 0 chr15 38876411 38876506 -64618468 - ID_B1 SINE B4 -9 215 121 7 881 1573 321 77 56 chr15 38876689 38876720 -64618254 - Lx8 LINE L1 -121 7352 7324 7 881 2289 116 0 12 chr15 38876720 38877052 -64617922 - ORR1A4 LTR MaLR -1 328 1 7 881 1573 321 77 56 chr15 38877052 38877358 -64617616 - Lx8 LINE L1 -150 7323 7001 7 881 729 0 0 0 chr15 38877358 38877439 -64617535 + (TC)n Simple_repeat Simple_repeat 1 81 0 7 881 1573 321 77 56 chr15 38877439 38877935 -64617039 - Lx8 LINE L1 -473 7000 6502 7 881 486 227 10 0 chr15 38877934 38878043 -64616931 + L1_Rod LINE L1 5609 5786 -403 7 881 520 294 8 0 chr15 38878109 38878235 -64616739 - B1_Mur1 SINE Alu -22 127 1 7 881 839 109 0 30 chr15 38879901 38880034 -64614940 + RMER6C LTR ERVK 2 130 -560 7 881 698 265 55 125 chr15 38880235 38880546 -64614428 - B4A SINE B4 -2 290 2 7 881 288 0 0 0 chr15 38880922 38880954 -64614020 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 881 207 0 0 0 chr15 38881236 38881259 -64613715 + (TTTTG)n Simple_repeat Simple_repeat 4 26 0 7 881 1057 102 0 37 chr15 38881547 38881710 -64613264 - B2_Mm2 SINE B2 -38 157 1 7 881 651 266 94 30 chr15 38881742 38882002 -64612972 - L1MC1 LINE L1 0 6333 6063 7 881 1951 254 62 20 chr15 38882054 38882696 -64612278 - L1MC1 LINE L1 -389 5944 5276 7 881 246 32 0 0 chr15 38883283 38883314 -64611660 + (TTTTTG)n Simple_repeat Simple_repeat 3 33 0 7 881 477 0 0 0 chr15 38885068 38885121 -64609853 + (TAA)n Simple_repeat Simple_repeat 2 54 0 7 881 752 75 57 0 chr15 38886088 38886194 -64608780 + B1_Mm SINE Alu 26 137 -10 7 881 1834 155 72 20 chr15 38886231 38886580 -64608394 - ORR1B2 LTR MaLR 0 367 1 7 881 339 345 0 0 chr15 38888373 38888483 -64606491 - PB1D7 SINE Alu -10 110 1 7 881 941 301 98 60 chr15 38888509 38888905 -64606069 - Lx8 LINE L1 -1 7472 7073 7 881 2985 114 40 29 chr15 38888905 38889382 -64605592 - RLTR45 LTR ERVK 0 482 1 7 881 941 301 98 60 chr15 38889382 38889631 -64605343 - Lx8 LINE L1 -401 7072 6803 7 881 69 0 0 0 chr15 38890160 38890229 -64604745 + AT_rich Low_complexity Low_complexity 1 69 0 7 881 288 315 58 18 chr15 38890341 38890564 -64604410 - Lx7 LINE L1 -276 7420 7189 7 881 281 234 53 0 chr15 38890613 38890707 -64604267 + A-rich Low_complexity Low_complexity 3 101 0 7 881 263 183 17 0 chr15 38890712 38890772 -64604202 - Lx6 LINE L1 -218 7242 7182 7 881 1250 74 0 0 chr15 38890777 38890925 -64604049 + B1_Mus1 SINE Alu 1 148 0 7 881 3122 198 122 26 chr15 38890955 38892648 -64602326 - Lx6 LINE L1 -393 7067 5213 7 881 316 98 49 0 chr15 38892656 38892717 -64602257 + (CCCCCT)n Simple_repeat Simple_repeat 6 69 0 7 881 329 236 22 11 chr15 38892723 38892813 -64602161 - Lx6 LINE L1 -690 5190 5100 7 881 290 114 0 0 chr15 38892820 38892864 -64602110 - ORR1C2 LTR MaLR -1 383 340 7 881 1457 165 27 8 chr15 38893880 38894137 -64600837 - ORR1C2 LTR MaLR -28 356 95 7 881 1738 143 94 14 chr15 38894146 38894443 -64600531 + ORR1A4 LTR MaLR 1 321 -8 7 881 591 154 19 0 chr15 38894446 38894550 -64600424 - ORR1C2 LTR MaLR -273 111 6 7 881 1249 166 4 13 chr15 38894555 38894787 -64600187 - Lx6 LINE L1 -795 5085 4856 7 881 699 134 53 9 chr15 38894793 38894906 -64600068 - RLTR19 LTR ERVK -20 479 362 7 881 2246 119 26 6 chr15 38894906 38895253 -64599721 + IAPEY2_LTR LTR ERVK 1 354 -3 7 881 2517 128 5 18 chr15 38895253 38895624 -64599350 - RLTR19 LTR ERVK -133 366 1 7 881 1524 161 25 73 chr15 38895625 38895919 -64599055 - Lx6 LINE L1 -1019 4861 4581 7 881 3870 163 43 12 chr15 38895919 38896588 -64598386 + RMER6C LTR ERVK 1 690 0 7 881 1524 161 25 73 chr15 38896588 38896648 -64598326 - Lx6 LINE L1 -1300 4580 4524 7 881 418 235 155 77 chr15 38896711 38896905 -64598069 - RMER2 LTR ERV1 -51 516 308 7 881 9080 140 39 34 chr15 38897154 38898301 -64596673 - Lx6 LINE L1 -1363 4517 3353 7 881 1677 0 54 11 chr15 38898301 38898486 -64596488 + B2_Mm1a SINE B2 1 193 0 7 881 9080 140 39 34 chr15 38898486 38899040 -64595934 - Lx6 LINE L1 -2528 3352 2807 7 881 577 167 0 0 chr15 38899037 38899133 -64595841 - Lx6 LINE L1 -4011 1869 1774 7 881 961 200 35 107 chr15 38899146 38899493 -64595481 - RLTRETN_Mm LTR ERVK 0 322 1 7 881 508 67 25 74 chr15 38899493 38899574 -64595400 - ETnERV2-int LTR ERVK -1 7405 7329 7 881 607 232 131 38 chr15 38899574 38899890 -64595084 - RLTR13B1 LTR ERVK -365 537 153 7 881 8821 186 52 55 chr15 38899890 38900220 -64594754 - MMETn-int LTR ERVK -345 4499 4162 7 881 1765 36 0 0 chr15 38900220 38900412 -64594562 + B2_Mm1a SINE B2 1 192 -1 7 881 8821 186 48 74 chr15 38900412 38902967 -64592007 - MMETn-int LTR ERVK -1801 5443 2356 7 881 1243 41 14 7 chr15 38902967 38903113 -64591861 - B1_Mm SINE Alu 0 147 1 7 881 3859 117 17 65 chr15 38903113 38903243 -64591731 - MMETn-int LTR ERVK -3843 3563 3439 7 881 2847 121 36 50 chr15 38903450 38904131 -64590843 - MMETn-int LTR ERVK -2657 2187 1730 7 881 473 242 125 0 chr15 38904218 38904338 -64590636 - MMETn-int LTR ERVK -5318 2088 1954 7 881 4387 149 32 86 chr15 38904333 38905275 -64589699 - MMETn-int LTR ERVK -3953 891 1 7 881 1024 184 38 107 chr15 38905276 38905622 -64589352 - RLTRETN_Mm LTR ERVK 0 322 1 7 881 953 188 0 0 chr15 38905672 38905821 -64589153 - B1_Mur4 SINE Alu 0 150 2 7 881 1382 186 4 0 chr15 38905862 38906098 -64588876 - RMER19B LTR ERVK -665 237 1 7 881 2075 129 17 3 chr15 38906098 38906448 -64588526 - Lx6 LINE L1 -4281 1599 1245 7 881 1729 145 92 14 chr15 38906456 38906962 -64588012 - RLTR33 LTR ERVK -4 674 73 7 881 1258 150 39 0 chr15 38907077 38907310 -64587664 - Lx6 LINE L1 -6476 1252 1011 7 881 1411 232 99 30 chr15 38907309 38907806 -64587168 - Lx6 LINE L1 -7181 547 17 7 881 25 0 0 0 chr15 38908110 38908135 -64586839 + AT_rich Low_complexity Low_complexity 1 25 0 7 881 28 0 0 0 chr15 38909718 38909746 -64585228 + AT_rich Low_complexity Low_complexity 1 28 0 7 881 340 259 0 0 chr15 38910623 38910681 -64584293 + ID4_ SINE ID 12 69 -14 7 881 324 0 0 0 chr15 38910704 38910740 -64584234 + (TC)n Simple_repeat Simple_repeat 2 37 0 7 881 315 0 0 0 chr15 38910740 38910774 -64584200 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 881 364 277 48 40 chr15 38910774 38910898 -64584076 - ID_B1 SINE B4 -9 215 91 7 881 244 293 28 2 chr15 38910924 38911024 -64583950 - MIR SINE MIR -107 161 60 7 881 422 163 155 52 chr15 38911520 38911617 -64583357 + PB1D9 SINE Alu 2 108 -12 7 881 243 0 0 0 chr15 38911620 38911647 -64583327 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 7 881 385 208 0 14 chr15 38911897 38911970 -64583004 - ID4 SINE ID -10 73 2 7 881 22 0 0 0 chr15 38912394 38912416 -64582558 + AT_rich Low_complexity Low_complexity 1 22 0 7 881 243 79 0 0 chr15 38912932 38912970 -64582004 + (G)n Simple_repeat Simple_repeat 1 38 0 7 881 189 94 0 0 chr15 38913400 38913432 -64581542 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 7 881 1262 61 0 0 chr15 38913432 38913579 -64581395 - B1_Mus1 SINE Alu 0 148 2 7 881 587 273 0 27 chr15 38913784 38913931 -64581043 + ID_B1 SINE B4 82 224 0 7 881 838 277 135 25 chr15 38914320 38914675 -64580299 - Lx8 LINE L1 -61 7412 7019 7 881 1441 291 38 32 chr15 38914692 38915217 -64579757 - Lx8 LINE L1 -562 6911 6384 7 881 912 286 164 36 chr15 38915183 38915761 -64579213 + Lx8 LINE L1 5737 6388 -1085 7 881 286 271 60 40 chr15 38916419 38916519 -64578455 - MER5B DNA MER1_type -3 175 74 7 881 1344 34 0 0 chr15 38917165 38917311 -64577663 + B1_Mm SINE Alu 1 146 -1 7 881 274 61 20 20 chr15 38917329 38917379 -64577595 + (CAAA)n Simple_repeat Simple_repeat 3 52 0 7 881 698 250 18 64 chr15 38917410 38917581 -64577393 + RSINE1 SINE B4 3 165 0 7 881 354 45 0 0 chr15 38917596 38917640 -64577334 + (TAGG)n Simple_repeat Simple_repeat 2 45 0 7 881 711 212 73 0 chr15 38918670 38918807 -64576167 - B1_Mur3 SINE Alu -1 148 2 7 881 625 127 69 31 chr15 38919018 38919148 -64575826 - Lx LINE L1 -29 6625 6491 7 881 1592 112 37 8 chr15 38919148 38919392 -64575582 - ETnERV2-int LTR ERVK -3345 4061 3811 7 881 399 189 0 13 chr15 38919392 38919467 -64575507 - MTC LTR MaLR -343 78 5 8 881 3335 74 7 26 chr15 38919720 38920178 -64574796 - RLTR1D LTR ERV1 0 605 157 8 881 978 188 10 51 chr15 38920244 38920276 -64574698 - B2_Mm2 SINE B2 -6 189 163 8 881 180 0 0 0 chr15 38920276 38920296 -64574678 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 8 881 978 188 10 51 chr15 38920296 38920459 -64574515 - B2_Mm2 SINE B2 -33 162 2 8 881 256 284 0 100 chr15 38920483 38920573 -64574401 + MER63D DNA AcHobo 261 341 -720 8 881 299 305 25 29 chr15 38920751 38920890 -64574084 + ERVL-int LTR ERVL 2803 2966 -2791 8 881 893 171 7 40 chr15 38920939 38921091 -64573883 + B1_Mur3 SINE Alu 2 148 -1 8 881 340 349 53 12 chr15 38921172 38921343 -64573631 + ERVL-int LTR ERVL 3019 3196 -2561 8 881 207 88 0 0 chr15 38921497 38921531 -64573443 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 8 881 2087 78 152 12 chr15 38921872 38922195 -64572779 - RLTR9A LTR ERVK 0 368 1 8 881 25 0 0 0 chr15 38922775 38922800 -64572174 + AT_rich Low_complexity Low_complexity 1 25 0 8 881 1143 89 7 20 chr15 38922942 38923091 -64571883 - B1_Mus2 SINE Alu 0 147 1 8 881 219 139 0 0 chr15 38923765 38923801 -64571173 + (T)n Simple_repeat Simple_repeat 1 36 0 8 881 327 238 138 0 chr15 38924980 38925060 -64569914 + B1_Mur3 SINE Alu 7 97 -52 8 881 534 181 0 0 chr15 38925125 38925208 -64569766 - B1_Mus1 SINE Alu -55 93 11 8 881 206 326 103 48 chr15 38925246 38925391 -64569583 - MIRm SINE MIR -97 179 27 8 881 454 269 73 93 chr15 38925971 38926217 -64568757 - MER99 DNA hAT? -589 242 2 8 881 23 54 0 0 chr15 38926333 38926370 -64568604 + AT_rich Low_complexity Low_complexity 1 37 0 8 881 435 264 12 100 chr15 38927937 38928097 -64566877 + B1F SINE Alu 1 146 -3 8 110 1004 240 15 35 chr15 38928260 38928519 -64566455 - Lx5 LINE L1 -11 7039 6786 8 882 185 0 40 0 chr15 38928801 38928826 -64566148 + (TTG)n Simple_repeat Simple_repeat 2 27 0 8 882 1231 82 0 0 chr15 38929260 38929407 -64565567 - B1_Mus1 SINE Alu 0 148 2 8 882 24 32 0 0 chr15 38929435 38929466 -64565508 + AT_rich Low_complexity Low_complexity 1 31 0 8 882 189 171 0 0 chr15 38929998 38930033 -64564941 + (CATA)n Simple_repeat Simple_repeat 2 36 0 8 882 32 43 0 0 chr15 38930369 38930415 -64564559 + AT_rich Low_complexity Low_complexity 1 46 0 8 882 350 275 21 34 chr15 38931249 38931352 -64563622 + PB1D10 SINE Alu 7 120 0 8 882 754 185 19 88 chr15 38931724 38931884 -64563090 + B1_Mur2 SINE Alu 1 149 0 8 882 21 0 0 0 chr15 38931921 38931942 -64563032 + AT_rich Low_complexity Low_complexity 1 21 0 8 882 254 222 40 53 chr15 38932382 38932458 -64562516 + PB1D10 SINE Alu 10 84 -33 8 882 1289 48 0 0 chr15 38932477 38932624 -64562350 - B1_Mus2 SINE Alu 0 147 1 8 882 340 36 71 0 chr15 38932661 38932717 -64562257 + (CCAA)n Simple_repeat Simple_repeat 2 61 0 8 882 932 221 30 25 chr15 38933079 38933279 -64561695 - B3 SINE B2 -15 201 1 8 882 441 167 68 68 chr15 38933843 38933946 -64561028 - RMER12 LTR ERVK 0 1322 1220 8 882 526 109 11 11 chr15 38933966 38934059 -64560915 + (TTTC)n Simple_repeat Simple_repeat 4 96 0 8 882 356 165 63 127 chr15 38934110 38934207 -64560767 - RMER12 LTR ERVK -261 1061 987 8 882 414 0 0 0 chr15 38934207 38934253 -64560721 + (TC)n Simple_repeat Simple_repeat 1 46 0 8 882 283 286 77 21 chr15 38934253 38934305 -64560669 - RMER12 LTR ERVK -286 1286 1233 8 882 471 130 0 0 chr15 38934305 38934382 -64560592 + (CATA)n Simple_repeat Simple_repeat 1 77 0 8 882 4378 127 35 51 chr15 38934383 38935211 -64559763 - RMER12 LTR ERVK -150 1254 1 8 882 372 196 174 10 chr15 38935763 38935861 -64559113 - B3A SINE B2 -82 116 3 8 882 351 291 43 0 chr15 38935865 38935982 -64558992 - ID_B1 SINE B4 -1 223 102 8 882 429 20 0 0 chr15 38936145 38936195 -64558779 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 882 315 143 175 0 chr15 38936212 38936275 -64558699 + ORR1C2 LTR MaLR 311 384 0 8 882 924 219 30 25 chr15 38937846 38938043 -64556931 + B3 SINE B2 14 211 -5 8 882 180 239 43 0 chr15 38938071 38938117 -64556857 + L4 LINE RTE 1198 1245 -784 8 882 725 164 8 0 chr15 38939036 38939158 -64555816 - B1_Mur4 SINE Alu 0 150 28 8 882 241 270 208 31 chr15 38939568 38939698 -64555276 + MIRb SINE MIR 25 177 -91 8 882 549 264 48 81 chr15 38940173 38940383 -64554591 + MLT1B LTR MaLR 183 385 -5 8 882 870 36 0 0 chr15 38941040 38941150 -64553824 + (TG)n Simple_repeat Simple_repeat 1 110 0 8 882 1823 169 71 51 chr15 38941601 38942012 -64552962 + MTD LTR MaLR 1 419 0 8 882 250 304 106 20 chr15 38942423 38942574 -64552400 + MIR SINE MIR 2 165 -103 8 882 483 280 125 49 chr15 38942822 38943006 -64551968 - B3A SINE B2 0 198 1 8 882 1020 53 0 30 chr15 38944802 38944937 -64550037 + B1_Mus1 SINE Alu 5 135 -13 8 882 2141 88 65 10 chr15 38945181 38945491 -64549483 + ORR1A2 LTR MaLR 1 327 0 8 882 237 143 17 35 chr15 38945883 38945926 -64549048 + T-rich Low_complexity Low_complexity 22 62 0 8 882 1103 61 0 33 chr15 38945926 38946079 -64548895 - B1_Mus1 SINE Alu 0 148 1 8 882 237 143 17 35 chr15 38946079 38946093 -64548881 + T-rich Low_complexity Low_complexity 7 21 0 8 882 847 154 21 7 chr15 38946765 38946909 -64548065 + B1_Mur1 SINE Alu 1 146 -3 8 882 495 274 19 88 chr15 38947282 38947331 -64547643 - B1_Mur1 SINE Alu 0 149 114 8 882 5740 101 24 8 chr15 38947331 38948180 -64546794 - Lx3B LINE L1 -3 6970 6109 8 882 495 274 19 88 chr15 38948180 38948290 -64546684 - B1_Mur1 SINE Alu -36 113 1 8 882 293 273 39 55 chr15 38948300 38948428 -64546546 + Charlie7 DNA MER1_type 1756 1881 -731 8 882 239 344 56 8 chr15 38948505 38948631 -64546343 + Charlie7 DNA MER1_type 2030 2161 -451 8 882 1251 27 0 7 chr15 38949010 38949157 -64545817 + B1_Mus2 SINE Alu 1 146 -1 8 882 279 255 40 20 chr15 38949618 38949718 -64545256 + MIR SINE MIR 94 195 -67 8 882 183 286 34 56 chr15 38949865 38949954 -64545020 - MIRm SINE MIR -1 275 189 8 882 1210 252 60 28 chr15 38951376 38951841 -64543133 - L1MB3 LINE L1 -35 6148 5669 8 882 457 227 128 16 chr15 38952663 38952851 -64542123 + L1MA9 LINE L1 5740 5948 -364 8 882 388 233 101 36 chr15 38953762 38953900 -64541074 - B4 SINE B4 -145 147 1 8 882 848 170 0 21 chr15 38953905 38954049 -64540925 - B1_Mur1 SINE Alu 0 149 9 8 882 476 287 112 19 chr15 38954082 38954242 -64540732 - B3A SINE B2 -22 176 2 8 882 509 286 53 0 chr15 38954277 38954410 -64540564 - ID_B1 SINE B4 -1 223 84 8 882 553 226 0 0 chr15 38954317 38954410 -64540564 - PB1D10 SINE Alu -22 95 3 8 882 258 310 9 83 chr15 38954410 38954424 -64540550 - MT2B LTR ERVL -348 251 153 8 882 23 54 0 0 chr15 38954875 38954912 -64540062 + AT_rich Low_complexity Low_complexity 1 37 0 8 882 237 211 68 40 chr15 38956207 38956281 -64538693 - PB1D10 SINE Alu 0 117 42 8 882 589 312 64 0 chr15 38957006 38957179 -64537795 + MER58A DNA MER1_type 40 223 -1 8 882 189 290 62 41 chr15 38957381 38957478 -64537496 + MIRc SINE MIR 118 216 -52 8 882 192 77 0 0 chr15 38958089 38958115 -64536859 + (T)n Simple_repeat Simple_repeat 1 26 0 8 882 783 231 80 5 chr15 38958335 38958548 -64536426 + B4A SINE B4 2 230 -62 8 882 656 242 129 0 chr15 38958560 38958746 -64536228 + B3 SINE B2 1 210 -6 8 882 351 247 11 76 chr15 38958788 38958880 -64536094 + RSINE1 SINE B4 2 87 -78 8 882 288 265 55 64 chr15 38958880 38958897 -64536077 + B2_Mm2 SINE B2 1 108 -87 8 882 356 345 98 25 chr15 38958991 38959226 -64535748 + L1M5 LINE L1 5553 5804 -320 8 882 602 281 8 0 chr15 38960150 38960278 -64534696 + ID_B1 SINE B4 82 210 -14 8 882 521 289 48 27 chr15 38960278 38960296 -64534678 + B1F SINE Alu 1 149 0 8 882 1232 90 34 0 chr15 38960386 38960564 -64534410 + B2_Mm2 SINE B2 2 185 -10 8 882 351 0 0 0 chr15 38960649 38960688 -64534286 + (TA)n Simple_repeat Simple_repeat 2 40 0 8 882 275 245 0 0 chr15 38960989 38961042 -64533932 - PB1D7 SINE Alu -7 113 61 8 882 658 163 15 44 chr15 38961029 38961164 -64533810 - B1_Mur2 SINE Alu -18 131 1 8 882 213 175 0 0 chr15 38961164 38961204 -64533770 + (TTA)n Simple_repeat Simple_repeat 3 42 0 8 882 23 54 0 0 chr15 38961484 38961521 -64533453 + AT_rich Low_complexity Low_complexity 1 37 0 8 882 330 343 35 7 chr15 38962220 38962361 -64532613 + B1F1 SINE Alu 4 148 -1 8 882 698 199 47 126 chr15 38962826 38963007 -64531967 + B3A SINE B2 2 172 -26 8 882 360 0 0 0 chr15 38963007 38963047 -64531927 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 882 1754 129 12 65 chr15 38963631 38963971 -64531003 - RLTRETN_Mm LTR ERVK 0 322 1 8 882 7095 199 71 82 chr15 38963971 38966880 -64528094 - MMETn-int LTR ERVK 0 4844 1968 8 882 6192 91 9 62 chr15 38966883 38967935 -64527039 - MMETn-int LTR ERVK -3846 998 2 8 882 1777 129 12 65 chr15 38967936 38968276 -64526698 - RLTRETN_Mm LTR ERVK 0 322 1 8 882 21 57 0 0 chr15 38968283 38968318 -64526656 + AT_rich Low_complexity Low_complexity 1 35 0 8 882 834 254 115 56 chr15 38968565 38969045 -64525929 - RLTR11A2 LTR ERVK -10 517 10 8 882 473 278 51 38 chr15 38969202 38969359 -64525615 - RSINE1 SINE B4 -1 164 6 8 882 297 184 45 22 chr15 38969360 38969449 -64525525 + T-rich Low_complexity Low_complexity 6 96 0 8 882 2337 176 10 12 chr15 38971205 38971609 -64523365 - MTD LTR MaLR -16 403 1 8 882 10024 107 11 4 chr15 38972050 38973636 -64521338 - L1_Mm LINE L1 -65 5818 4222 8 882 2781 149 111 45 chr15 38973631 38974228 -64520746 - L1VL1 LINE L1 -5596 826 191 8 882 502 189 153 30 chr15 38974709 38974840 -64520134 + B1_Mus2 SINE Alu 1 147 0 8 882 212 143 47 23 chr15 38975464 38975507 -64519467 + CT-rich Low_complexity Low_complexity 4 47 0 8 882 532 267 126 11 chr15 38975513 38975695 -64519279 + B4A SINE B4 81 283 -9 9 882 552 318 52 12 chr15 38976891 38977037 -64517937 - B4A SINE B4 -59 233 83 9 882 1063 88 7 0 chr15 38977037 38977184 -64517790 + B1_Mus1 SINE Alu 1 148 0 9 882 552 318 52 12 chr15 38977184 38977209 -64517765 - B4A SINE B4 -210 82 56 9 882 281 278 222 0 chr15 38977317 38977389 -64517585 + PB1D10 SINE Alu 1 88 -29 9 882 227 54 0 26 chr15 38977767 38977805 -64517169 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 9 882 463 202 51 76 chr15 38977810 38977928 -64517046 - B1_Mus2 SINE Alu -5 115 1 9 882 438 194 175 0 chr15 38977930 38978033 -64516941 - 5S rRNA rRNA 0 121 1 9 882 262 302 0 0 chr15 38978596 38978659 -64516315 - AmnSINE1 SINE SINE -426 149 87 9 882 233 0 62 0 chr15 38979765 38979797 -64515177 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 9 882 1932 166 78 8 chr15 38979803 38980186 -64514788 - Lx5 LINE L1 -4 7046 6637 9 882 22 56 0 0 chr15 38980194 38980230 -64514744 + AT_rich Low_complexity Low_complexity 1 36 0 9 882 478 72 0 45 chr15 38980236 38980324 -64514650 - Lx4A LINE L1 -2 7056 6973 9 882 620 266 28 7 chr15 38980826 38980970 -64514004 + ID_B1 SINE B4 3 149 -75 9 882 211 89 43 43 chr15 38981034 38981081 -64513893 + GA-rich Low_complexity Low_complexity 1 47 0 9 882 22 70 0 0 chr15 38982310 38982353 -64512621 + AT_rich Low_complexity Low_complexity 1 43 0 9 882 180 0 0 0 chr15 38983079 38983099 -64511875 + (CA)n Simple_repeat Simple_repeat 2 21 0 9 882 1532 169 133 0 chr15 38983099 38983459 -64511515 - Lx9 LINE L1 -185 7459 7052 9 882 258 371 26 32 chr15 38983835 38983991 -64510983 + MLT1N2 LTR MaLR 390 544 -18 9 882 258 258 38 41 chr15 38984047 38984126 -64510848 - ID4_ SINE ID 0 83 2 9 882 2340 131 22 8 chr15 38984210 38984579 -64510395 + ORR1C1 LTR MaLR 5 378 0 9 882 2360 175 44 30 chr15 38984637 38985161 -64509813 + ORR1C1-int LTR MaLR 110 640 -869 9 882 5611 92 4 2 chr15 38985168 38986157 -64508817 + L1_Mus2 LINE L1 1122 2113 -3770 9 882 3893 99 43 24 chr15 38986154 38986218 -64508756 + L1_Mus2 LINE L1 5239 5293 -590 9 882 1467 68 0 5 chr15 38986218 38986410 -64508564 + B2_Mm2 SINE B2 1 191 -4 9 882 7453 64 11 8 chr15 38986410 38987663 -64507311 + L1_Mus2 LINE L1 5294 6566 0 9 882 840 269 16 5 chr15 38988842 38989036 -64505938 + B3A SINE B2 1 196 -2 9 882 499 146 7 21 chr15 38989047 38989187 -64505787 + (CA)n Simple_repeat Simple_repeat 1 138 0 9 882 282 29 0 0 chr15 38989211 38989246 -64505728 + (TC)n Simple_repeat Simple_repeat 1 35 0 9 882 313 130 0 18 chr15 38989246 38989294 -64505680 + HAL1-3A_ME LINE L1 1983 2029 -829 9 882 217 178 0 76 chr15 38989705 38989784 -64505190 + (TTATA)n Simple_repeat Simple_repeat 3 75 0 9 882 744 320 40 14 chr15 38990721 38991073 -64503901 - L1MB5 LINE L1 -1 6173 5813 9 882 1110 222 0 0 chr15 38991091 38991289 -64503685 - B3 SINE B2 0 216 19 9 882 2508 118 64 8 chr15 38991291 38991682 -64503292 - MTC LTR MaLR -8 413 1 9 882 344 273 21 74 chr15 38991767 38991862 -64503112 - B3 SINE B2 -118 98 9 9 882 1035 255 100 20 chr15 38991874 38992590 -64502384 - L1MB5 LINE L1 -377 5803 5028 9 882 297 279 0 0 chr15 38992778 38992846 -64502128 + (CA)n Simple_repeat Simple_repeat 1 68 0 9 882 273 366 72 67 chr15 38993199 38993407 -64501567 + ORR1E LTR MaLR 3 211 -148 9 882 656 230 140 31 chr15 38993854 38994059 -64500915 + B4 SINE B4 5 233 -59 9 882 396 0 0 0 chr15 38994097 38994141 -64500833 + (TC)n Simple_repeat Simple_repeat 1 44 0 9 882 342 61 0 0 chr15 38994141 38994189 -64500785 + (CA)n Simple_repeat Simple_repeat 1 49 0 9 882 187 93 23 23 chr15 38994198 38994242 -64500732 + (CAAAAA)n Simple_repeat Simple_repeat 2 45 0 9 882 251 368 102 26 chr15 38994301 38994566 -64500408 + MER113A DNA MER1_type 24 308 -6 9 882 1125 36 0 0 chr15 38995600 38995739 -64499235 + B1_Mus2 SINE Alu 9 147 0 9 882 354 284 38 29 chr15 38995739 38995750 -64499224 + MT2B LTR ERVL 173 278 -323 9 882 457 239 21 21 chr15 38995750 38995844 -64499130 + B1_Mur1 SINE Alu 29 122 -27 9 882 215 365 37 28 chr15 38995888 38995968 -64499006 + PB1D10 SINE Alu 1 80 -37 9 882 2795 69 68 2 chr15 38995968 38996363 -64498611 - BGLII LTR ERVK 0 421 1 9 882 215 365 37 28 chr15 38996363 38996389 -64498585 + PB1D10 SINE Alu 81 108 -9 9 882 468 51 0 0 chr15 38996552 38996611 -64498363 + (TATG)n Simple_repeat Simple_repeat 2 60 0 9 882 3001 23 12 0 chr15 38997590 38997932 -64497042 - ORR1A0 LTR MaLR 0 346 1 9 882 1005 163 93 21 chr15 38999803 38999997 -64494977 + MTC LTR MaLR 9 216 -205 9 882 947 175 124 0 chr15 39000003 39000180 -64494794 + MTC LTR MaLR 223 421 0 1 882 355 267 192 0 chr15 39001901 39002021 -64492953 + MIR SINE MIR 14 156 -106 2 882 186 314 182 40 chr15 39002243 39002369 -64492605 - MIRb SINE MIR -52 216 73 3 882 377 279 111 28 chr15 39002418 39002562 -64492412 - MIR SINE MIR -40 222 67 4 882 218 186 0 0 chr15 39002885 39002928 -64492046 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 5 882 332 314 178 2 chr15 39003139 39003305 -64491669 - MIR SINE MIR -64 198 18 6 882 284 253 33 33 chr15 39003418 39003508 -64491466 - PB1D10 SINE Alu -5 112 23 7 882 270 0 0 0 chr15 39003526 39003556 -64491418 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 8 882 230 264 14 14 chr15 39003557 39003630 -64491344 + CT-rich Low_complexity Low_complexity 1 73 0 9 882 269 242 121 40 chr15 39003631 39003730 -64491244 - B1F1 SINE Alu -21 128 22 1 882 340 320 9 37 chr15 39003647 39003754 -64491220 - ID_B1 SINE B4 -42 182 79 1 882 231 288 16 83 chr15 39003754 39003768 -64491206 + YREP_Mm Unknown Unknown 217 329 -1483 1 882 1262 114 11 16 chr15 39003808 39003995 -64490979 + B2_Mm2 SINE B2 3 188 -7 1 882 555 315 126 58 chr15 39004128 39004573 -64490401 - LTR84b LTR ERVL -285 476 2 1 882 2322 96 63 14 chr15 39004586 39004936 -64490038 + IAPLTR1_Mm LTR ERVK 1 367 0 1 882 7378 84 98 71 chr15 39004936 39006208 -64488766 + IAPEz-int LTR ERVK 8 1313 -5168 1 882 29054 21 9 0 chr15 39006207 39009449 -64485525 + IAPEz-int LTR ERVK 3210 6478 -3 1 882 2322 96 63 14 chr15 39009453 39009803 -64485171 + IAPLTR1_Mm LTR ERVK 1 367 0 1 882 312 144 55 23 chr15 39010541 39010669 -64484305 + GA-rich Low_complexity Low_complexity 1 132 0 1 882 24 53 0 0 chr15 39011174 39011212 -64483762 + AT_rich Low_complexity Low_complexity 1 38 0 1 882 490 241 48 91 chr15 39011298 39011540 -64483434 - RLTR12B LTR ERVK -212 356 113 1 882 398 187 11 0 chr15 39011848 39011939 -64483035 + (CAT)n Simple_repeat Simple_repeat 3 94 0 1 882 216 0 0 0 chr15 39013204 39013228 -64481746 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 2 882 472 271 75 91 chr15 39013778 39013975 -64480999 - B4A SINE B4 0 292 3 2 882 1654 62 0 0 chr15 39014005 39014198 -64480776 + B2_Mm1t SINE B2 1 193 0 2 882 273 57 0 0 chr15 39014711 39014746 -64480228 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 882 11024 62 9 4 chr15 39014932 39016320 -64478654 + L1_Mm LINE L1 4190 5586 -297 2 882 7634 76 28 8 chr15 39016320 39017297 -64477677 + L1Md_F2 LINE L1 5587 6582 0 2 882 304 303 54 34 chr15 39017762 39017909 -64477065 + MER3 DNA MER1_type 1 150 -59 2 882 510 154 113 19 chr15 39018125 39018231 -64476743 - PB1D10 SINE Alu -1 116 1 2 882 764 199 188 0 chr15 39018443 39018619 -64476355 + B3 SINE B2 2 210 -6 2 882 23 0 0 0 chr15 39019039 39019062 -64475912 + AT_rich Low_complexity Low_complexity 1 23 0 2 882 290 229 85 22 chr15 39019779 39019880 -64475094 - MLT1A1 LTR MaLR -236 129 15 3 882 21 0 0 0 chr15 39020261 39020282 -64474692 + AT_rich Low_complexity Low_complexity 1 21 0 3 882 26 0 0 0 chr15 39020398 39020424 -64474550 + AT_rich Low_complexity Low_complexity 1 26 0 3 882 29 28 0 0 chr15 39020561 39020597 -64474377 + AT_rich Low_complexity Low_complexity 1 36 0 3 882 345 197 0 0 chr15 39020722 39020793 -64474181 + (TA)n Simple_repeat Simple_repeat 2 72 0 3 882 871 245 54 5 chr15 39020929 39021134 -64473840 - B3 SINE B2 0 216 2 3 882 604 270 22 60 chr15 39021167 39021352 -64473622 - B3A SINE B2 -16 182 5 3 882 478 288 76 82 chr15 39021729 39022179 -64472795 - L1MC5 LINE L1 -184 7777 7331 3 882 695 111 9 9 chr15 39022641 39022750 -64472224 - B1_Mur4 SINE Alu 0 150 42 3 882 738 237 17 11 chr15 39022882 39023061 -64471913 - Lx7 LINE L1 -612 7084 6905 3 882 414 321 86 41 chr15 39023680 39023901 -64471073 - MamSINE1 SINE tRNA -58 232 2 4 882 255 301 24 121 chr15 39024248 39024414 -64470560 - L2c LINE L2 -8 3379 3230 4 882 288 246 0 40 chr15 39024729 39024805 -64470169 - L2a LINE L2 -7 3419 3347 4 882 238 240 0 0 chr15 39024909 39024959 -64470015 + G-rich Low_complexity Low_complexity 1 50 0 4 882 218 225 0 0 chr15 39025173 39025213 -64469761 - ID SINE ID -145 79 40 4 882 811 268 129 23 chr15 39025216 39025393 -64469581 - ORR1D2 LTR MaLR 0 370 185 4 882 569 14 14 0 chr15 39025393 39025463 -64469511 + (GA)n Simple_repeat Simple_repeat 2 72 0 4 882 811 277 135 37 chr15 39025463 39025574 -64469400 - ORR1D2 LTR MaLR -186 184 56 4 882 565 238 31 20 chr15 39025623 39025750 -64469224 - ORR1D2 LTR MaLR -259 135 7 4 882 1449 232 116 11 chr15 39025770 39026149 -64468825 - MTD LTR MaLR 0 419 1 4 882 366 278 112 43 chr15 39026302 39026490 -64468484 - Charlie20a DNA Charlie -513 294 94 4 882 207 384 35 18 chr15 39027609 39027723 -64467251 - MER5B DNA MER1_type -3 175 60 4 882 39 68 0 0 chr15 39029173 39029247 -64465727 + GC_rich Low_complexity Low_complexity 1 74 0 5 882 202 298 32 16 chr15 39029492 39029615 -64465359 + (CCCCG)n Simple_repeat Simple_repeat 2 126 0 5 882 23 54 0 0 chr15 39029922 39029959 -64465015 + GC_rich Low_complexity Low_complexity 1 37 0 5 882 275 263 41 21 chr15 39032729 39032826 -64462148 + Charlie7 DNA MER1_type 2512 2610 -2 5 882 416 191 39 87 chr15 39033445 39033548 -64461426 - PB1D10 SINE Alu -14 103 6 5 882 381 224 52 78 chr15 39033453 39033569 -64461405 - ID_B1 SINE B4 -48 176 64 5 882 687 233 13 52 chr15 39033735 39033889 -64461085 - B1_Mur1 SINE Alu -1 148 1 5 882 315 0 0 0 chr15 39033893 39033928 -64461046 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 5 882 803 193 0 15 chr15 39033929 39034066 -64460908 - B1_Mur2 SINE Alu -14 135 1 5 882 21 57 0 0 chr15 39034107 39034142 -64460832 + AT_rich Low_complexity Low_complexity 1 35 0 5 882 1247 27 0 14 chr15 39035064 39035212 -64459762 - B1_Mus2 SINE Alu 0 147 2 6 882 4924 146 10 2 chr15 39036652 39037454 -64457520 - Lx9 LINE L1 -1940 5704 4888 6 882 226 0 59 0 chr15 39037454 39037488 -64457486 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 6 882 6961 79 40 26 chr15 39037488 39038496 -64456478 + Lx LINE L1 5632 6653 -1 6 882 460 237 0 85 chr15 39038526 39038632 -64456342 - PB1D10 SINE Alu -20 97 1 6 882 222 305 212 26 chr15 39039234 39039460 -64455514 - L2 LINE L2 -454 2965 2698 6 882 393 75 0 0 chr15 39039949 39040002 -64454972 + (TCCCC)n Simple_repeat Simple_repeat 5 57 0 6 882 793 200 14 7 chr15 39040003 39040144 -64454830 - B1_Mus2 SINE Alu -5 142 1 6 882 642 305 15 15 chr15 39040550 39040750 -64454224 + B3 SINE B2 4 203 -13 6 882 27 0 0 0 chr15 39040751 39040778 -64454196 + AT_rich Low_complexity Low_complexity 1 27 0 6 882 8564 66 16 10 chr15 39041754 39042850 -64452124 - Lx3_Mus LINE L1 0 7009 5908 7 882 905 154 11 0 chr15 39042856 39043031 -64451943 + CT-rich Low_complexity Low_complexity 4 180 0 7 882 785 209 7 26 chr15 39043154 39043306 -64451668 - B1_Mur1 SINE Alu 0 149 1 7 882 618 14 0 0 chr15 39043384 39043455 -64451519 + (CA)n Simple_repeat Simple_repeat 2 72 0 7 882 347 183 170 11 chr15 39043483 39043577 -64451397 - ID_B1 SINE B4 -2 222 114 7 882 186 359 16 0 chr15 39043579 39043643 -64451331 - MIRc SINE MIR -181 87 23 7 882 234 303 26 0 chr15 39044241 39044317 -64450657 + LTR33 LTR ERVL 359 436 -79 7 882 1009 141 0 0 chr15 39044434 39044569 -64450405 - B1_Mur4 SINE Alu -15 135 1 7 882 704 238 215 0 chr15 39045171 39045343 -64449631 - B3 SINE B2 -7 209 1 7 882 919 316 17 21 chr15 39045603 39045894 -64449080 - B4A SINE B4 -2 290 1 7 882 313 282 265 0 chr15 39045986 39046156 -64448818 + MIR SINE MIR 28 242 -20 8 882 352 340 38 18 chr15 39046310 39046465 -64448509 - MLT1D LTR MaLR -138 486 343 8 882 258 32 0 0 chr15 39046465 39046496 -64448478 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 882 388 329 153 67 chr15 39046496 39046856 -64448118 - MLT1D LTR MaLR -222 402 6 8 882 225 190 137 126 chr15 39046996 39047116 -64447858 + B1_Mur2 SINE Alu 53 144 -5 8 882 230 328 102 70 chr15 39047372 39047559 -64447415 - ORR1E LTR MaLR -8 351 159 8 882 3015 57 25 3 chr15 39047613 39047980 -64446994 - L1_Mus1 LINE L1 0 6567 6193 8 882 916 84 0 0 chr15 39047980 39048111 -64446863 + L1_Mm LINE L1 1301 1431 -4452 8 882 195 39 0 0 chr15 39048224 39048244 -64446730 + (TA)n Simple_repeat Simple_repeat 1 20 0 8 882 261 0 0 0 chr15 39048244 39048273 -64446701 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 882 306 266 59 69 chr15 39048563 39048664 -64446310 - LTR41B LTR ERVL -137 621 522 8 882 249 289 148 9 chr15 39048918 39049033 -64445941 - LTR41B LTR ERVL -552 216 86 8 882 324 336 94 60 chr15 39049113 39049347 -64445627 - MLT1I LTR MaLR -45 366 125 9 882 517 254 75 127 chr15 39049788 39050095 -64444879 - B4 SINE B4 0 292 2 9 882 317 314 77 39 chr15 39050280 39050462 -64444512 - MER46C DNA MER2_type -10 328 140 9 882 417 267 46 11 chr15 39051429 39051551 -64443423 + B1F SINE Alu 4 126 -23 9 882 1555 53 21 5 chr15 39052613 39052801 -64442173 - B2_Mm2 SINE B2 -3 192 2 9 882 387 283 64 14 chr15 39052910 39053050 -64441924 + B1F SINE Alu 1 147 -2 9 882 1817 21 0 0 chr15 39053961 39054154 -64440820 + B2_Mm1a SINE B2 1 193 0 9 882 1463 71 16 0 chr15 39054177 39054360 -64440614 + B2_Mm2 SINE B2 2 187 -8 9 882 247 233 169 0 chr15 39054461 39054540 -64440434 - ID2 SINE ID -60 92 2 9 882 382 271 51 0 chr15 39054741 39054859 -64440115 + ID_B1 SINE B4 100 223 -1 9 882 740 132 0 28 chr15 39055145 39055254 -64439720 - B1_Mur3 SINE Alu -34 115 10 1 882 357 259 60 69 chr15 39055158 39055274 -64439700 - B4A SINE B4 -98 194 80 1 882 1658 47 0 0 chr15 39055274 39055465 -64439509 - B2_Mm1a SINE B2 -2 191 1 1 882 25 0 0 0 chr15 39055615 39055640 -64439334 + AT_rich Low_complexity Low_complexity 1 25 0 1 882 351 333 91 0 chr15 39056045 39056177 -64438797 - RSINE1 SINE B4 -7 158 15 1 882 576 0 0 0 chr15 39056220 39056284 -64438690 + (TTCTC)n Simple_repeat Simple_repeat 4 67 0 1 882 274 110 0 109 chr15 39056284 39056376 -64438598 + C-rich Low_complexity Low_complexity 4 85 0 1 882 483 18 0 0 chr15 39056370 39056426 -64438548 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 1 882 2871 203 6 2 chr15 39056429 39056973 -64438001 - Lx5 LINE L1 0 7050 6505 1 882 2641 129 23 2 chr15 39056973 39057456 -64437518 + L1_Mur2 LINE L1 2756 3248 -2629 1 882 578 283 40 0 chr15 39057736 39057888 -64437086 - RSINE1 SINE B4 -6 159 2 1 882 1826 276 113 42 chr15 39058007 39058944 -64436030 - Lx9 LINE L1 -35 7609 6606 1 882 1023 32 0 0 chr15 39059032 39059155 -64435819 + (TTCCC)n Simple_repeat Simple_repeat 3 125 0 1 110 2500 73 134 0 chr15 39059168 39059564 -64435410 - RLTR47_MM LTR ERV1 -83 449 1 1 883 359 311 20 11 chr15 39059732 39059929 -64435045 - MuRRS4-int LTR ERV1 -266 4797 4663 1 883 2032 290 55 65 chr15 39060472 39062084 -64432890 - MuRRS4-int LTR ERV1 -2009 5547 2757 1 883 546 303 46 57 chr15 39062171 39062830 -64432144 - MuRRS4-int LTR ERV1 -5191 2415 1765 1 883 883 322 81 43 chr15 39062798 39064137 -64430837 - MuRRS4-int LTR ERV1 -5651 1905 512 1 883 759 132 160 0 chr15 39064636 39064780 -64430194 - RLTR47_MM LTR ERV1 0 532 366 1 883 839 169 21 0 chr15 39065231 39065373 -64429601 + B1_Mur3 SINE Alu 5 149 0 1 883 1028 132 11 0 chr15 39065528 39065702 -64429272 + (TCTCC)n Simple_repeat Simple_repeat 5 180 0 1 883 1196 61 0 0 chr15 39065719 39065866 -64429108 - B1_Mus2 SINE Alu 0 147 1 1 883 38 61 0 0 chr15 39066003 39066069 -64428905 + AT_rich Low_complexity Low_complexity 1 66 0 1 883 25 31 0 0 chr15 39066293 39066325 -64428649 + AT_rich Low_complexity Low_complexity 1 32 0 1 883 189 0 0 0 chr15 39066671 39066692 -64428282 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 883 1830 76 15 0 chr15 39066733 39066995 -64427979 - L1_Mus3 LINE L1 -108 6530 6265 1 883 612 183 48 21 chr15 39066995 39067140 -64427834 - RMER3D-int LTR ERVK -1162 1680 1532 1 883 1182 151 0 61 chr15 39067160 39067407 -64427567 - RMER3D-int LTR ERVK -1299 1543 1312 1 883 438 189 0 0 chr15 39067408 39067482 -64427492 + tRNA-Lys-AAG tRNA tRNA 1 74 -2 1 883 2730 180 21 32 chr15 39067485 39068052 -64426922 - RLTR31_Mm LTR ERVK 0 561 1 1 883 329 247 21 43 chr15 39068821 39068914 -64426060 + PB1D7 SINE Alu 22 112 -8 1 883 225 0 0 0 chr15 39068925 39068950 -64426024 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1 883 252 267 21 53 chr15 39069379 39069474 -64425500 - MIR SINE MIR -52 210 119 1 883 840 326 39 23 chr15 39069479 39069865 -64425109 + L1MEg LINE L1 4 395 -5689 1 883 570 230 78 16 chr15 39069892 39070020 -64424954 + ID_B1 SINE B4 89 224 0 1 883 1031 194 48 24 chr15 39070185 39070355 -64424619 + B3 SINE B2 4 182 -34 1 883 243 0 0 0 chr15 39070355 39070382 -64424592 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 883 1031 194 48 24 chr15 39070382 39070417 -64424557 + B3 SINE B2 183 214 -2 1 883 22 0 0 0 chr15 39070417 39070439 -64424535 + AT_rich Low_complexity Low_complexity 1 22 0 1 883 393 290 113 57 chr15 39070597 39070758 -64424216 + L1MEg LINE L1 1033 1201 -4883 1 883 1287 67 0 0 chr15 39070758 39071167 -64423807 + (CA)n Simple_repeat Simple_repeat 1 409 0 1 883 393 290 113 57 chr15 39071167 39071297 -64423677 + L1MEg LINE L1 1202 1349 -4735 1 883 231 288 48 36 chr15 39071305 39071388 -64423586 - PB1 SINE Alu 0 127 44 1 883 372 239 269 10 chr15 39071424 39071694 -64423280 + L1MEg LINE L1 1343 1661 -4347 1 883 4166 59 40 9 chr15 39073391 39073934 -64421040 - LTRIS2 LTR ERV1 0 564 5 1 883 834 189 62 31 chr15 39073937 39074161 -64420813 - RLTR1B-int LTR ERV1 -42 5021 4791 1 883 1016 227 62 31 chr15 39074254 39074670 -64420304 - RLTR1B-int LTR ERV1 -486 2813 2669 1 883 8570 78 52 86 chr15 39074657 39076080 -64418894 - RLTR1B-int LTR ERV1 -744 2555 1165 1 883 198 0 0 0 chr15 39076080 39076102 -64418872 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 883 8570 213 136 16 chr15 39076102 39076940 -64418034 - RLTR1B-int LTR ERV1 -3361 1702 761 1 883 4337 141 24 15 chr15 39076931 39077681 -64417293 - RMER16-int LTR ERVK -3960 1446 690 1 883 738 159 73 78 chr15 39077667 39077858 -64417116 - RMER16-int LTR ERVK -5075 331 142 1 883 691 83 0 2 chr15 39078205 39078314 -64416660 - RLTR1B-int LTR ERV1 -3006 293 139 1 883 4166 59 40 9 chr15 39078525 39079068 -64415906 - LTRIS2 LTR ERV1 0 564 5 1 883 1498 234 122 92 chr15 39079705 39080464 -64414510 + RLTR13D6 LTR ERVK 1 894 -8 1 883 3338 75 38 21 chr15 39081139 39081613 -64413361 + RLTR45 LTR ERVK 1 482 0 1 883 353 275 54 61 chr15 39082247 39082394 -64412580 + B1F SINE Alu 1 146 -3 1 883 231 313 59 15 chr15 39082396 39082464 -64412510 + ID SINE ID 3 73 -151 1 883 528 59 0 0 chr15 39082473 39082541 -64412433 + (CAAAC)n Simple_repeat Simple_repeat 2 69 0 1 883 1221 251 115 72 chr15 39082560 39082713 -64412261 + RMER5 LTR ERV1 1 140 -394 1 883 873 241 18 32 chr15 39082713 39082932 -64412042 + B3 SINE B2 1 216 0 1 883 1221 251 115 72 chr15 39082932 39083290 -64411684 + RMER5 LTR ERV1 141 534 0 1 883 273 346 12 0 chr15 39083819 39083900 -64411074 - ID4_ SINE ID 0 83 2 1 883 233 283 0 0 chr15 39084079 39084125 -64410849 - L2c LINE L2 -42 3345 3300 1 883 412 280 30 60 chr15 39084318 39084451 -64410523 - RLTR31_Mur LTR ERVK -43 510 382 1 883 891 335 20 45 chr15 39084433 39084833 -64410141 - RLTR17 LTR ERVK -178 514 125 1 883 342 0 0 0 chr15 39084968 39085006 -64409968 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 883 248 172 224 24 chr15 39085037 39085162 -64409812 + L1MA8 LINE L1 5107 5256 -887 1 883 1095 296 72 79 chr15 39085175 39086018 -64408956 + L1MA8 LINE L1 5297 6135 -156 1 883 3863 124 111 24 chr15 39086018 39086714 -64408260 - RMER6A LTR ERVK 0 756 1 1 883 24 32 0 0 chr15 39087444 39087475 -64407499 + AT_rich Low_complexity Low_complexity 1 31 0 1 883 414 0 0 0 chr15 39087583 39087629 -64407345 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 883 622 189 102 0 chr15 39087700 39087827 -64407147 - B1_Mur4 SINE Alu -8 142 3 1 883 533 101 0 66 chr15 39088100 39088206 -64406768 - L1Md_F2 LINE L1 0 6582 6484 1 883 211 182 0 0 chr15 39088280 39088313 -64406661 + C-rich Low_complexity Low_complexity 6 38 0 1 883 374 247 124 2 chr15 39088386 39088559 -64406415 - L1MB7 LINE L1 -78 6102 5907 1 883 234 305 0 0 chr15 39088567 39088626 -64406348 - ID2 SINE ID -10 73 15 1 883 298 299 104 7 chr15 39088645 39088780 -64406194 - B1F1 SINE Alu -1 148 1 1 883 319 235 12 0 chr15 39088781 39088866 -64406108 - L1MB7 LINE L1 -279 5899 5814 1 883 522 217 62 2 chr15 39088861 39089039 -64405935 - L1MB8 LINE L1 0 6180 5991 1 883 545 321 64 89 chr15 39089137 39089573 -64405401 - RLTR11B LTR ERVK -105 423 1 1 883 632 274 36 51 chr15 39089573 39089904 -64405070 - L1MB8 LINE L1 -201 5977 5652 1 883 5584 195 109 22 chr15 39090076 39090092 -64404882 - Lx7 LINE L1 0 7696 7681 1 883 3560 85 0 30 chr15 39090092 39090599 -64404375 - L1Md_F2 LINE L1 -2 6580 6089 1 883 5584 195 109 22 chr15 39090599 39090820 -64404154 - Lx7 LINE L1 -16 7680 7425 1 883 369 0 0 0 chr15 39090820 39090861 -64404113 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 883 5584 195 109 22 chr15 39090861 39092007 -64402967 - Lx7 LINE L1 -272 7424 6192 1 883 645 120 103 0 chr15 39092008 39092125 -64402849 + Lx2 LINE L1 6869 6997 0 1 883 288 138 0 0 chr15 39092144 39092209 -64402765 + (A)n Simple_repeat Simple_repeat 1 65 0 1 883 948 209 106 8 chr15 39092209 39092464 -64402510 - ORR1C1-int LTR MaLR -1229 280 1 1 883 890 165 174 10 chr15 39092464 39092660 -64402314 - ORR1C1 LTR MaLR 0 378 151 1 883 3800 164 24 16 chr15 39092665 39093463 -64401511 - L1_Mur3 LINE L1 -888 4992 4189 1 883 755 246 92 134 chr15 39093464 39093950 -64401024 - RMER4B LTR ERVK 0 611 15 1 883 4429 196 66 20 chr15 39093951 39095602 -64399372 - L1_Mur3 LINE L1 -1692 4194 2400 1 883 279 282 15 37 chr15 39095808 39095948 -64399026 - ID4_ SINE ID -18 134 2 1 883 474 236 47 16 chr15 39095977 39096106 -64398868 - B1_Mur1 SINE Alu -6 143 11 1 883 586 248 44 0 chr15 39096355 39096492 -64398482 - ORR1C1 LTR MaLR -231 143 1 1 883 207 167 0 0 chr15 39096666 39096708 -64398266 + (CAT)n Simple_repeat Simple_repeat 3 44 0 1 883 23 0 0 0 chr15 39096852 39096875 -64398099 + AT_rich Low_complexity Low_complexity 1 23 0 1 883 635 275 33 6 chr15 39097288 39097471 -64397503 - B3A SINE B2 -4 194 7 1 883 299 242 28 83 chr15 39098413 39098441 -64396533 + MT2B LTR ERVL 139 160 -441 1 883 450 171 23 0 chr15 39098441 39098529 -64396445 + B1_Mus2 SINE Alu 2 91 -56 1 883 4980 136 38 79 chr15 39098529 39098799 -64396175 - RLTR21 LTR ERVK -3 1569 1297 1 883 414 0 0 0 chr15 39098799 39098845 -64396129 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 883 4980 127 39 55 chr15 39098845 39099832 -64395142 - RLTR21 LTR ERVK -276 1296 1 1 883 394 167 0 77 chr15 39099832 39099892 -64395082 + B1_Mur3 SINE Alu 95 148 -1 1 883 4894 54 2 4 chr15 39099892 39100612 -64394362 - L1Md_F2 LINE L1 -340 6242 5524 1 883 2320 78 0 12 chr15 39100609 39100947 -64394027 + L1Md_F2 LINE L1 6209 6542 -40 1 883 237 0 21 85 chr15 39100947 39100994 -64393980 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 1 883 288 290 70 19 chr15 39101002 39101160 -64393814 + MER112 DNA MER1_type 81 246 -15 1 883 246 281 0 50 chr15 39101179 39101239 -64393735 - Charlie12 DNA MER1_type 0 2873 2817 1 883 513 287 25 6 chr15 39101358 39101516 -64393458 - Charlie12 DNA MER1_type -43 2830 2670 1 883 851 177 0 14 chr15 39101528 39101671 -64393303 + B1_Mur2 SINE Alu 1 141 -8 1 883 671 269 89 26 chr15 39101691 39101882 -64393092 - ID_B1 SINE B4 -11 213 11 1 883 486 304 74 49 chr15 39101903 39102187 -64392787 - B4A SINE B4 0 292 2 1 883 3184 278 70 26 chr15 39102188 39103253 -64391721 - Charlie12 DNA MER1_type -194 2679 1568 1 883 288 0 0 0 chr15 39103327 39103359 -64391615 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 883 1381 216 141 6 chr15 39103359 39103705 -64391269 + MTD LTR MaLR 21 415 -4 1 883 282 291 7 99 chr15 39103683 39103824 -64391150 - Charlie12 DNA MER1_type -1355 1518 1391 1 883 301 343 38 98 chr15 39104961 39105226 -64389748 - MTEa LTR MaLR -116 263 15 1 883 275 237 38 38 chr15 39106233 39106312 -64388662 + ID4_ SINE ID 2 80 -3 1 883 24 0 0 0 chr15 39106865 39106889 -64388085 + AT_rich Low_complexity Low_complexity 1 24 0 1 883 278 294 35 0 chr15 39107650 39107735 -64387239 - MLT1J LTR MaLR -318 194 107 1 883 235 194 48 16 chr15 39108262 39108325 -64386649 + CT-rich Low_complexity Low_complexity 4 68 0 1 883 305 338 88 29 chr15 39108325 39108462 -64386512 - HAL1-3A_ME LINE L1 -419 2439 2295 1 883 728 169 36 22 chr15 39108732 39108871 -64386103 + B1_Mur3 SINE Alu 2 142 -7 1 883 394 172 160 11 chr15 39109202 39109296 -64385678 + PB1D10 SINE Alu 9 116 -1 2 883 304 296 53 97 chr15 39109411 39109804 -64385170 - L1ME3A LINE L1 -106 6067 5692 2 883 1271 206 103 11 chr15 39110169 39110546 -64384428 + Lx9 LINE L1 7232 7643 -1 2 883 344 48 0 0 chr15 39110633 39110675 -64384299 + HAL1-3A_ME LINE L1 1979 2020 -838 2 883 5410 119 54 7 chr15 39110729 39111993 -64382981 - L1Md_F2 LINE L1 0 6582 5239 2 883 2964 97 0 0 chr15 39111990 39112433 -64382541 - L1Md_F2 LINE L1 -3770 2113 1671 2 883 2871 294 30 65 chr15 39112442 39113491 -64381483 - Lx7 LINE L1 -413 7283 6272 2 883 597 235 121 51 chr15 39113547 39113803 -64381171 - L1_Mur3 LINE L1 -3734 2146 1873 2 883 615 169 134 24 chr15 39113807 39113934 -64381040 - B1_Mus2 SINE Alu -2 145 5 2 883 1986 154 21 121 chr15 39113961 39114205 -64380769 - ORR1C2 LTR MaLR 0 384 172 2 883 186 43 0 0 chr15 39114205 39114228 -64380746 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 883 1986 154 21 121 chr15 39114228 39114404 -64380570 - ORR1C2 LTR MaLR -213 171 6 2 883 2215 224 39 58 chr15 39114405 39115379 -64379595 - L1_Mur3 LINE L1 -4016 1864 914 2 883 213 94 0 0 chr15 39116044 39116076 -64378898 + (TAA)n Simple_repeat Simple_repeat 3 34 0 2 883 180 333 82 61 chr15 39116547 39116694 -64378280 - L2a LINE L2 0 3426 3277 2 883 22 0 0 0 chr15 39116974 39116996 -64377978 + AT_rich Low_complexity Low_complexity 1 22 0 2 883 1353 188 136 3 chr15 39117353 39117663 -64377311 - ORR1D1 LTR MaLR 0 374 24 2 883 1165 119 124 0 chr15 39118100 39118301 -64376673 - URR1A DNA MER1_type 0 226 1 2 883 353 285 55 11 chr15 39118515 39118696 -64376278 + Kanga2_a DNA Tc2 205 393 -495 2 883 579 301 49 0 chr15 39119016 39119179 -64375795 + MER58A DNA MER1_type 53 223 -1 2 883 564 325 53 18 chr15 39119264 39119546 -64375428 + L1M5 LINE L1 4764 5055 -1091 2 883 465 34 0 0 chr15 39119605 39119664 -64375310 + (CA)n Simple_repeat Simple_repeat 1 59 0 2 883 244 294 0 56 chr15 39119925 39119997 -64374977 + tRNA-Glu-GAG tRNA tRNA 7 74 -1 2 883 369 247 58 23 chr15 39120006 39120093 -64374881 + PB1D10 SINE Alu 2 91 -26 2 883 396 193 26 0 chr15 39120102 39120216 -64374758 + (TAGA)n Simple_repeat Simple_repeat 1 117 0 2 883 620 234 336 25 chr15 39120655 39121170 -64373804 - L1M2 LINE L1 -3269 2877 2204 2 883 32 67 0 0 chr15 39121270 39121330 -64373644 + AT_rich Low_complexity Low_complexity 1 60 0 2 883 235 310 34 50 chr15 39121470 39121589 -64373385 - L1MCc LINE L1 -5161 1262 1146 2 883 757 278 24 0 chr15 39122383 39122595 -64372379 + ID_B1 SINE B4 5 221 -3 2 883 360 225 49 16 chr15 39122706 39122828 -64372146 - L1MCc LINE L1 -6269 154 29 2 883 608 239 137 10 chr15 39122935 39123117 -64371857 - B3A SINE B2 0 198 11 2 883 317 82 0 20 chr15 39123436 39123486 -64371488 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 883 367 62 62 0 chr15 39124690 39124755 -64370219 + (TATG)n Simple_repeat Simple_repeat 3 71 0 2 883 1701 240 99 24 chr15 39124781 39125247 -64369727 - RLTR11A LTR ERVK -27 501 1 2 883 207 0 0 0 chr15 39125250 39125273 -64369701 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 883 507 266 229 19 chr15 39125295 39125605 -64369369 - L1MEc LINE L1 -2021 4298 3924 2 883 33 25 0 0 chr15 39125796 39125836 -64369138 + AT_rich Low_complexity Low_complexity 1 40 0 2 883 1055 72 0 0 chr15 39125884 39126022 -64368952 + B1_Mus1 SINE Alu 9 146 -2 2 883 348 237 127 14 chr15 39126048 39126310 -64368664 - L1MEc LINE L1 -2654 3665 3371 2 883 5574 75 0 0 chr15 39126597 39127313 -64367661 - L1_Mus2 LINE L1 0 6566 5851 2 883 1099 265 133 22 chr15 39127577 39128036 -64366938 - Lx8 LINE L1 -2 7471 6962 2 883 303 253 60 0 chr15 39128149 39128232 -64366742 - L1MEc LINE L1 -6288 112 25 2 883 270 116 0 0 chr15 39128467 39128510 -64366464 + (TCCC)n Simple_repeat Simple_repeat 3 45 0 2 883 198 353 39 10 chr15 39129468 39129571 -64365403 + MIR3 SINE MIR 102 207 -1 2 883 202 298 11 77 chr15 39129795 39129886 -64365088 + MER5A DNA MER1_type 102 186 -3 2 883 395 269 106 0 chr15 39129926 39130086 -64364888 + Charlie2a DNA MER1_type 1478 1654 -1207 2 883 1593 47 0 0 chr15 39130736 39130929 -64364045 - B2_Mm1t SINE B2 0 193 1 2 883 465 19 0 0 chr15 39131148 39131202 -64363772 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 883 4633 108 14 4 chr15 39131239 39131929 -64363045 - Lx2 LINE L1 -5 6992 6296 2 883 28 61 0 0 chr15 39132248 39132297 -64362677 + AT_rich Low_complexity Low_complexity 1 49 0 2 883 392 220 33 0 chr15 39132403 39132494 -64362480 - Lx8 LINE L1 -183 7290 7197 2 883 480 266 85 40 chr15 39132567 39132743 -64362231 - Lx8 LINE L1 -432 7041 6858 2 883 2504 275 37 27 chr15 39133153 39133883 -64361091 - Lx8 LINE L1 -610 6863 6127 2 883 477 192 48 20 chr15 39133913 39134051 -64360923 + B2_Mm2 SINE B2 9 153 -40 2 883 425 200 261 0 chr15 39134289 39134419 -64360555 - RMER1B Other Other -11 1055 892 2 883 1659 277 117 41 chr15 39134460 39134535 -64360439 - Lx8 LINE L1 -1576 5897 5808 2 883 771 11 0 0 chr15 39134535 39134623 -64360351 + (TTTC)n Simple_repeat Simple_repeat 2 89 0 2 883 1659 272 116 48 chr15 39134623 39135606 -64359368 - Lx8 LINE L1 -65 5815 4767 2 883 216 0 0 0 chr15 39135679 39135703 -64359271 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2 883 821 93 202 0 chr15 39135704 39135833 -64359141 - B2_Mm2 SINE B2 -39 156 2 2 883 26 0 0 0 chr15 39135896 39135922 -64359052 + AT_rich Low_complexity Low_complexity 1 26 0 2 883 7230 33 0 0 chr15 39136134 39136987 -64357987 - L1Md_T LINE L1 0 6582 5730 2 883 25 65 0 0 chr15 39137087 39137133 -64357841 + AT_rich Low_complexity Low_complexity 1 46 0 2 883 570 29 0 0 chr15 39138966 39139034 -64355940 + (TC)n Simple_repeat Simple_repeat 2 69 0 2 883 21 0 0 0 chr15 39139851 39139872 -64355102 + AT_rich Low_complexity Low_complexity 1 21 0 2 883 1938 49 12 0 chr15 39141491 39141735 -64353239 - L1_Mus2 LINE L1 0 6566 6320 2 883 510 362 81 59 chr15 39141753 39142258 -64352716 - MLT2B3 LTR ERVL -38 516 1 2 883 3051 137 40 43 chr15 39142281 39142836 -64352138 - RLTR31_Mur LTR ERVK 0 553 1 2 883 279 265 0 78 chr15 39142962 39143052 -64351922 - RSINE1 SINE B4 0 165 83 2 883 2702 140 42 19 chr15 39143071 39143280 -64351694 - Lx3C LINE L1 -2 6974 6769 2 883 483 18 0 0 chr15 39143280 39143336 -64351638 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 883 2702 140 42 19 chr15 39143336 39143600 -64351374 - Lx3C LINE L1 -208 6768 6492 2 883 9826 138 53 19 chr15 39143600 39144691 -64350283 - L1_Mur1 LINE L1 -2755 3131 1999 2 883 180 0 0 0 chr15 39144691 39144711 -64350263 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 883 9826 138 53 19 chr15 39144711 39144742 -64350232 - L1_Mur1 LINE L1 -3888 1998 1968 2 883 564 15 0 0 chr15 39144742 39144807 -64350167 + (TTTC)n Simple_repeat Simple_repeat 4 68 0 2 883 9826 164 85 27 chr15 39144807 39146253 -64348721 - L1_Mur1 LINE L1 -3919 1967 380 2 883 663 108 0 0 chr15 39146927 39147029 -64347945 + (TC)n Simple_repeat Simple_repeat 2 103 0 2 883 2455 205 93 0 chr15 39147054 39147601 -64347373 + L1_Mur3 LINE L1 2067 2664 -3216 2 883 727 256 57 22 chr15 39147584 39147862 -64347112 - L1M4c LINE L1 -2265 6259 5974 2 883 17409 79 5 7 chr15 39147903 39151009 -64343965 - L1VL4 LINE L1 -1966 3920 828 2 883 1350 179 9 4 chr15 39150994 39151224 -64343750 - L1VL4 LINE L1 -6066 591 361 2 883 455 323 40 81 chr15 39151238 39151511 -64343463 - L1M4c LINE L1 -758 6027 5766 2 883 475 337 105 11 chr15 39151591 39151858 -64343116 - Lx9 LINE L1 -996 6648 6357 2 883 210 147 0 0 chr15 39151863 39151897 -64343077 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 883 281 206 139 28 chr15 39152184 39152330 -64342644 - L1M4c LINE L1 -4826 1964 1810 2 883 432 253 116 17 chr15 39152332 39152505 -64342469 - L1MB7 LINE L1 -11 6173 5984 2 883 1069 234 115 53 chr15 39152638 39153090 -64341884 - L1MA6 LINE L1 -316 5984 5505 2 883 609 157 0 0 chr15 39153880 39153982 -64340992 - RMER1C Other Other -1 1341 1240 2 883 716 253 128 5 chr15 39153990 39154065 -64340909 - B4A SINE B4 -73 219 136 2 883 3259 21 39 0 chr15 39154065 39154446 -64340528 - MTA_Mm LTR MaLR 0 396 1 2 883 716 253 128 5 chr15 39154446 39154565 -64340409 - B4A SINE B4 -157 135 3 2 883 3198 78 26 2 chr15 39155251 39155703 -64339271 - Lx3A LINE L1 -1 6980 6518 2 883 220 317 67 82 chr15 39156555 39156689 -64338285 + MER5B DNA MER1_type 40 171 -7 2 883 4048 160 97 70 chr15 39156914 39157792 -64337182 - RMER19B LTR ERVK 0 902 1 2 883 22 70 0 0 chr15 39158152 39158195 -64336779 + AT_rich Low_complexity Low_complexity 1 43 0 2 883 444 163 0 0 chr15 39158260 39158346 -64336628 + (CA)n Simple_repeat Simple_repeat 2 87 0 2 883 899 323 34 0 chr15 39158352 39158649 -64336325 - Lx8 LINE L1 -155 7318 7012 2 883 271 223 85 0 chr15 39158818 39158912 -64336062 - Lx8 LINE L1 -490 6983 6882 2 883 1398 305 42 52 chr15 39158926 39159503 -64335471 - Lx8 LINE L1 -674 6799 6229 2 883 1469 260 136 24 chr15 39159621 39160497 -64334477 - Charlie2a DNA MER1_type -415 2367 1478 2 883 490 251 15 161 chr15 39160575 39160774 -64334200 - B4A SINE B4 0 292 123 2 883 479 276 40 27 chr15 39161262 39161411 -64333563 + MTEb LTR MaLR 1 151 -228 2 883 307 205 81 8 chr15 39161557 39161680 -64333294 + Lx7 LINE L1 7563 7694 -2 2 883 25 0 0 0 chr15 39162466 39162491 -64332483 + AT_rich Low_complexity Low_complexity 1 25 0 2 883 309 383 0 62 chr15 39162670 39162862 -64332112 - RMER4A LTR ERVK -279 187 8 2 883 581 242 65 0 chr15 39163768 39163892 -64331082 + B3 SINE B2 2 133 -83 2 883 519 285 205 0 chr15 39163910 39164110 -64330864 - B4A SINE B4 -47 245 5 2 883 464 81 14 0 chr15 39164134 39164208 -64330766 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 883 754 314 134 42 chr15 39164307 39164881 -64330093 - L2 LINE L2 -346 3073 2447 2 883 312 221 7 106 chr15 39165655 39165797 -64329177 - MT2A LTR ERVL 0 533 406 2 883 279 0 0 0 chr15 39165806 39165837 -64329137 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 883 870 261 150 44 chr15 39165837 39166172 -64328802 - MT2A LTR ERVL -76 457 84 2 883 180 0 0 0 chr15 39166172 39166192 -64328782 + (CAAAC)n Simple_repeat Simple_repeat 2 21 0 2 883 870 261 150 44 chr15 39166192 39166269 -64328705 - MT2A LTR ERVL -450 83 3 2 883 456 136 0 0 chr15 39166893 39166981 -64327993 + (CA)n Simple_repeat Simple_repeat 1 88 0 2 883 327 258 44 29 chr15 39167087 39167223 -64327751 - L1M2 LINE L1 -3281 2862 2725 2 883 2132 123 15 6 chr15 39167249 39167583 -64327391 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 883 5742 66 13 19 chr15 39167585 39168361 -64326613 - IAPEz-int LTR ERVK -2 6479 5709 2 883 3102 20 0 0 chr15 39168352 39168709 -64326265 - IAPEz-int LTR ERVK -2124 4357 4001 2 883 387 89 0 0 chr15 39168707 39168763 -64326211 - IAPEz-int LTR ERVK -3707 2774 2719 2 883 17979 45 38 22 chr15 39168762 39171063 -64323911 - IAPEz-int LTR ERVK -4136 2345 8 2 883 2132 123 15 6 chr15 39171063 39171397 -64323577 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 883 207 0 0 0 chr15 39172085 39172108 -64322866 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 2 883 22 56 0 0 chr15 39172576 39172612 -64322362 + AT_rich Low_complexity Low_complexity 1 36 0 2 883 231 274 113 21 chr15 39172752 39172849 -64322125 - MER63B DNA AcHobo -46 390 285 3 883 183 100 0 0 chr15 39173091 39173121 -64321853 + (TTA)n Simple_repeat Simple_repeat 2 31 0 3 883 246 21 0 111 chr15 39173345 39173399 -64321575 + (TCTCTG)n Simple_repeat Simple_repeat 1 48 0 3 883 228 35 0 0 chr15 39173409 39173438 -64321536 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 3 883 194 98 49 0 chr15 39173490 39173531 -64321443 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 3 883 300 27 0 0 chr15 39173544 39173581 -64321393 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 3 883 363 60 0 0 chr15 39173639 39173689 -64321285 + (TCTCTG)n Simple_repeat Simple_repeat 5 54 0 3 883 205 315 0 14 chr15 39173797 39173871 -64321103 + CT-rich Low_complexity Low_complexity 2 74 0 3 883 470 186 118 8 chr15 39173901 39174020 -64320954 - ID_B1 SINE B4 0 224 93 3 883 491 108 84 67 chr15 39174299 39174418 -64320556 + Lx2 LINE L1 6877 6997 0 3 883 225 250 98 16 chr15 39174468 39174529 -64320445 + BC1_Mm scRNA scRNA 6 71 -81 3 883 25 31 0 0 chr15 39174729 39174761 -64320213 + AT_rich Low_complexity Low_complexity 1 32 0 3 883 563 40 14 0 chr15 39175774 39175848 -64319126 + (TCTA)n Simple_repeat Simple_repeat 2 76 0 3 883 385 295 134 35 chr15 39175966 39176198 -64318776 - L1MA8 LINE L1 -355 5936 5682 3 883 325 276 68 11 chr15 39177224 39177312 -64317662 - RSINE1 SINE B4 -70 95 3 3 883 351 260 240 0 chr15 39177774 39177878 -64317096 - B1F1 SINE Alu -15 134 6 3 883 258 295 107 46 chr15 39178165 39178492 -64316482 - L1MC LINE L1 -1101 5045 4699 3 883 22480 75 9 11 chr15 39178583 39182440 -64312534 - L1Md_A LINE L1 -1674 4209 361 3 883 12197 92 5 30 chr15 39182438 39184943 -64310031 - L1VL4 LINE L1 -904 2655 222 3 883 1550 160 12 70 chr15 39185898 39186207 -64308767 + ORR1C1 LTR MaLR 1 292 -92 3 883 1061 161 21 5 chr15 39186207 39186394 -64308580 - URR1B DNA MER1_type -1 224 35 3 883 300 202 114 45 chr15 39186401 39186489 -64308485 + ORR1C1 LTR MaLR 277 370 -8 3 883 28 0 0 0 chr15 39186970 39186998 -64307976 + AT_rich Low_complexity Low_complexity 1 28 0 3 883 908 307 37 47 chr15 39187142 39187525 -64307449 - MTE2a LTR MaLR 0 379 1 3 883 1752 218 64 84 chr15 39187797 39187917 -64307057 + Lx9 LINE L1 7069 7197 -447 3 883 351 78 0 0 chr15 39187917 39187968 -64307006 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 883 1752 218 64 84 chr15 39187968 39188325 -64306649 + Lx9 LINE L1 7198 7526 -118 3 883 189 0 0 0 chr15 39188325 39188346 -64306628 + (TC)n Simple_repeat Simple_repeat 1 21 0 3 883 1752 218 64 84 chr15 39188346 39188448 -64306526 + Lx9 LINE L1 7527 7636 -8 3 883 524 244 258 18 chr15 39188499 39188720 -64306254 - B4A SINE B4 -18 274 1 3 883 186 43 0 0 chr15 39188724 39188747 -64306227 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 883 442 287 105 0 chr15 39188937 39189080 -64305894 + BLACKJACK DNA AcHobo 100 257 -2687 3 883 243 0 0 0 chr15 39189208 39189235 -64305739 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 883 207 309 0 0 chr15 39189395 39189450 -64305524 + L2a LINE L2 3333 3387 -39 3 883 656 139 0 0 chr15 39189494 39189595 -64305379 - MusHAL1 LINE L1 -1660 1052 952 3 883 1256 84 6 0 chr15 39189595 39189774 -64305200 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 3 883 479 71 0 45 chr15 39189779 39189868 -64305106 + (TCTCC)n Simple_repeat Simple_repeat 3 87 0 3 883 938 48 0 45 chr15 39189868 39190000 -64304974 - B1_Mm SINE Alu -21 126 1 3 883 337 248 0 8 chr15 39190000 39190028 -64304946 - ORR1B1-int LTR MaLR -862 647 621 3 883 2806 68 62 11 chr15 39190028 39190462 -64304512 - MusHAL1 LINE L1 -1774 938 483 3 110 256 262 31 75 chr15 39190481 39190642 -64304332 - L1MC LINE L1 -2402 5480 5327 3 884 1238 282 105 38 chr15 39190738 39191272 -64303702 - MLT1E LTR MaLR -10 643 74 3 884 775 289 110 40 chr15 39191463 39191943 -64303031 - L1MB7 LINE L1 -19 6165 5652 3 884 684 191 88 7 chr15 39192629 39192766 -64302208 - B1_Mur4 SINE Alu -1 149 2 3 884 283 304 114 48 chr15 39193829 39193995 -64300979 - L2a LINE L2 -189 3237 3061 3 884 22 70 0 0 chr15 39194103 39194146 -64300828 + AT_rich Low_complexity Low_complexity 1 43 0 3 884 548 316 72 54 chr15 39194175 39194453 -64300521 - Lx8 LINE L1 -35 7438 7156 3 884 595 340 133 12 chr15 39194453 39194783 -64300191 + MLT1E2 LTR MaLR 52 421 -206 3 884 27 49 0 0 chr15 39195553 39195594 -64299380 + AT_rich Low_complexity Low_complexity 1 41 0 3 884 396 0 0 0 chr15 39195719 39195763 -64299211 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 884 2283 237 139 43 chr15 39195763 39196616 -64298358 - Lx9 LINE L1 -177 7467 6533 3 884 234 260 0 33 chr15 39196797 39196852 -64298122 + T-rich Low_complexity Low_complexity 1 53 0 3 884 612 73 0 0 chr15 39196852 39196934 -64298040 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 3 884 1242 34 0 0 chr15 39196934 39197081 -64297893 - B1_Mus2 SINE Alu 0 147 1 3 884 234 191 0 41 chr15 39197081 39197096 -64297878 + T-rich Low_complexity Low_complexity 2 15 0 3 884 625 332 61 12 chr15 39197267 39197693 -64297281 - L1M4 LINE L1 -2018 4128 3682 3 884 306 287 0 24 chr15 39198038 39198114 -64296860 + ID4_ SINE ID 2 72 -11 3 884 201 138 0 0 chr15 39198177 39198206 -64296768 + (TCCCC)n Simple_repeat Simple_repeat 4 32 0 3 884 207 0 0 0 chr15 39198387 39198410 -64296564 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3 884 1711 258 21 17 chr15 39198428 39198850 -64296124 - Lx6 LINE L1 -40 7420 6997 3 884 1158 294 109 11 chr15 39199493 39199934 -64295040 - Lx7 LINE L1 -463 7233 6750 3 884 1139 124 92 0 chr15 39199934 39200119 -64294855 - URR1A DNA MER1_type 0 226 25 3 884 21 0 0 0 chr15 39200415 39200436 -64294538 + AT_rich Low_complexity Low_complexity 1 21 0 3 884 369 43 0 0 chr15 39201268 39201315 -64293659 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 884 1037 68 18 30 chr15 39202412 39202578 -64292396 + L1_Mus2 LINE L1 6403 6566 0 3 884 388 354 31 6 chr15 39203749 39203908 -64291066 - RSINE1 SINE B4 0 165 3 3 884 235 364 114 43 chr15 39203931 39204370 -64290604 + L2 LINE L2 2279 2748 -671 3 884 389 154 99 0 chr15 39205365 39205456 -64289518 - Lx9 LINE L1 -1 7643 7544 3 884 3720 66 2 18 chr15 39205916 39206407 -64288567 + L1_Mus2 LINE L1 6083 6565 -1 3 884 212 0 36 0 chr15 39206912 39206940 -64288034 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 884 215 284 42 76 chr15 39207933 39208051 -64286923 - B1F2 SINE Alu -34 115 2 3 884 229 299 25 38 chr15 39208821 39208901 -64286073 - RSINE1 SINE B4 -84 81 3 3 884 333 293 71 31 chr15 39208939 39209066 -64285908 + B1F SINE Alu 17 148 -1 3 884 287 315 213 0 chr15 39209071 39209198 -64285776 + RSINE1 SINE B4 2 155 -10 3 884 5284 38 0 0 chr15 39209301 39209934 -64285040 - L1Md_T LINE L1 0 6582 5950 3 884 6383 84 44 1 chr15 39210301 39211207 -64283767 - Lx3_Mus LINE L1 -8 7001 6057 3 884 306 0 0 0 chr15 39211223 39211257 -64283717 + (TTA)n Simple_repeat Simple_repeat 3 36 0 3 884 8113 97 15 1 chr15 39211257 39213264 -64281710 - L1_Mus3 LINE L1 -19 6619 4579 3 884 2114 123 0 0 chr15 39213279 39213605 -64281369 + L1_Mm LINE L1 3904 4229 -1654 3 884 33037 80 7 11 chr15 39213629 39218797 -64276177 + L1Md_A LINE L1 446 5587 -296 3 884 8243 39 1 1 chr15 39218797 39219787 -64275187 + L1Md_F2 LINE L1 5588 6577 -5 3 884 2242 149 0 0 chr15 39219788 39220163 -64274811 + L1_Mm LINE L1 4218 4592 -1291 3 884 203 286 77 13 chr15 39221366 39221444 -64273530 - L2a LINE L2 -4 3422 3340 3 884 243 341 33 0 chr15 39221756 39221847 -64273127 + MARNA DNA Mariner 120 213 -373 3 884 269 300 0 0 chr15 39227318 39227398 -64267576 + MER94 DNA AcHobo 21 100 -34 3 884 516 266 55 23 chr15 39229236 39229559 -64265415 - ORR1E LTR MaLR 0 379 4 3 884 261 284 0 0 chr15 39230018 39230099 -64264875 - L1M2 LINE L1 -1282 4861 4781 3 884 271 268 39 85 chr15 39230293 39230481 -64264493 - L1MA4A LINE L1 -381 5922 5728 3 884 498 273 202 56 chr15 39230556 39230789 -64264185 - B4 SINE B4 -20 272 6 3 884 395 258 89 30 chr15 39230791 39230959 -64264015 - L1MA4A LINE L1 -515 5776 5599 3 884 467 230 200 0 chr15 39230979 39231114 -64263860 - B4A SINE B4 0 292 131 3 884 541 318 38 26 chr15 39231196 39231461 -64263513 - L1MA4A LINE L1 -1180 4963 4696 3 884 289 323 28 72 chr15 39231883 39232063 -64262911 - L1MEa LINE L1 -4807 1393 1222 3 884 414 0 0 0 chr15 39232083 39232129 -64262845 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 884 891 140 48 20 chr15 39232315 39232461 -64262513 - B1_Mur4 SINE Alu 0 150 1 3 884 336 214 125 25 chr15 39232474 39232594 -64262380 - Lx7 LINE L1 0 7696 7565 3 884 374 271 15 15 chr15 39232647 39232842 -64262132 - L1MEa LINE L1 -5167 927 733 3 884 203 103 0 25 chr15 39233138 39233178 -64261796 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 3 884 234 293 17 0 chr15 39233253 39233311 -64261663 - ID SINE ID -164 60 2 3 884 571 353 82 31 chr15 39234077 39234486 -64260488 - MLT1E2 LTR MaLR -140 540 130 3 884 3029 71 2 21 chr15 39234718 39235147 -64259827 - BGLII LTR ERVK 0 421 1 3 884 203 179 0 0 chr15 39235151 39235190 -64259784 + T-rich Low_complexity Low_complexity 1 39 0 3 884 734 214 13 33 chr15 39235397 39235408 -64259566 - B1_Mur4 SINE Alu -3 147 141 3 884 208 0 62 0 chr15 39235408 39235440 -64259534 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 884 734 214 13 33 chr15 39235440 39235578 -64259396 - B1_Mur4 SINE Alu -10 140 1 3 884 566 317 38 24 chr15 39236126 39236414 -64258560 - B4A SINE B4 0 292 1 3 884 22 0 0 0 chr15 39236424 39236446 -64258528 + AT_rich Low_complexity Low_complexity 1 22 0 3 884 259 203 0 33 chr15 39236456 39236517 -64258457 - Lx7 LINE L1 -16 7680 7622 4 884 428 0 19 0 chr15 39237039 39237091 -64257883 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 884 1961 214 70 5 chr15 39237095 39237537 -64257437 - Lx7 LINE L1 -284 7412 6942 4 884 228 132 382 0 chr15 39237550 39237618 -64257356 - PB1D7 SINE Alu -1 146 53 4 884 250 97 0 0 chr15 39237634 39237665 -64257309 - MurSatRep1 Unknown Unknown -1874 263 233 4 884 272 241 96 0 chr15 39238589 39238672 -64256302 - B3A SINE B2 -107 91 1 4 884 468 91 0 0 chr15 39238912 39238978 -64255996 + (TCCC)n Simple_repeat Simple_repeat 4 69 0 4 884 247 311 114 16 chr15 39239360 39239553 -64255421 - L1M5 LINE L1 -385 5855 5644 4 884 913 291 121 24 chr15 39240097 39240552 -64254422 - Lx8 LINE L1 -779 6694 6196 4 884 31 0 0 0 chr15 39240562 39240593 -64254381 + AT_rich Low_complexity Low_complexity 1 31 0 4 884 1256 14 0 13 chr15 39241554 39241703 -64253271 + B1_Mus2 SINE Alu 1 147 0 4 884 195 42 0 0 chr15 39241703 39241727 -64253247 + (A)n Simple_repeat Simple_repeat 1 24 0 4 884 301 181 13 77 chr15 39241889 39242045 -64252929 + (TATAA)n Simple_repeat Simple_repeat 3 148 0 4 884 494 324 123 17 chr15 39242329 39242678 -64252296 - MLT1B LTR MaLR 0 390 5 4 884 582 123 38 8 chr15 39243724 39243855 -64251119 + (TCTA)n Simple_repeat Simple_repeat 2 136 0 4 884 336 207 29 125 chr15 39245053 39245172 -64249802 - MTEb LTR MaLR 0 379 259 4 884 180 0 0 0 chr15 39245247 39245267 -64249707 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 4 884 6596 128 22 48 chr15 39245367 39246920 -64248054 - Lx2 LINE L1 -18 6990 5357 4 884 7812 75 3 4 chr15 39246925 39248413 -64246561 - L1_Mus2 LINE L1 0 6566 5080 4 884 12208 105 13 21 chr15 39248413 39250314 -64244660 + L1_Mm LINE L1 3062 4947 -936 4 884 3131 144 4 12 chr15 39250390 39250882 -64244092 - L1VL4 LINE L1 -5635 667 180 4 884 24 53 0 0 chr15 39252029 39252067 -64242907 + AT_rich Low_complexity Low_complexity 1 38 0 4 884 273 254 0 0 chr15 39253527 39253586 -64241388 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 884 525 174 0 0 chr15 39253754 39253886 -64241088 + (CA)n Simple_repeat Simple_repeat 1 132 0 4 884 2127 118 19 24 chr15 39254472 39255017 -64239957 + RMER17D2 LTR ERVK 1 809 0 4 884 325 228 0 45 chr15 39255207 39255340 -64239634 + (TTATA)n Simple_repeat Simple_repeat 5 131 0 4 884 387 290 98 20 chr15 39257657 39258060 -64236914 - L1M3f LINE L1 -4520 2517 1741 4 884 283 359 70 0 chr15 39258772 39258914 -64236060 - L1M3f LINE L1 -6669 361 210 4 884 282 388 32 43 chr15 39259501 39259687 -64235287 - L1M3f LINE L1 -6648 382 199 4 884 623 191 0 50 chr15 39259770 39259891 -64235083 - B3 SINE B2 -100 116 2 4 884 7978 48 5 3 chr15 39259922 39260912 -64234062 - L1Md_F2 LINE L1 -4 6578 5587 4 884 24617 110 21 8 chr15 39260929 39264766 -64230208 - L1_Mur1 LINE L1 -7 5879 1993 4 884 353 219 101 30 chr15 39264836 39264935 -64230039 + B1_Mur4 SINE Alu 45 150 0 4 884 210 37 0 0 chr15 39264953 39264980 -64229994 + (CATA)n Simple_repeat Simple_repeat 4 30 0 4 884 423 38 0 0 chr15 39264980 39265032 -64229942 + (GA)n Simple_repeat Simple_repeat 2 54 0 4 884 201 208 0 20 chr15 39265201 39265250 -64229724 - L3 LINE CR1 -1677 2812 2765 4 884 21 82 0 0 chr15 39265268 39265317 -64229657 + AT_rich Low_complexity Low_complexity 1 49 0 4 884 21 82 0 0 chr15 39270418 39270467 -64224507 + AT_rich Low_complexity Low_complexity 1 49 0 4 884 22 35 0 0 chr15 39270653 39270682 -64224292 + AT_rich Low_complexity Low_complexity 1 29 0 4 884 21 36 0 0 chr15 39270822 39270850 -64224124 + AT_rich Low_complexity Low_complexity 1 28 0 4 884 22 35 0 0 chr15 39271575 39271604 -64223370 + AT_rich Low_complexity Low_complexity 1 29 0 4 884 423 173 0 0 chr15 39272802 39272883 -64222091 + CT-rich Low_complexity Low_complexity 2 82 0 4 884 548 294 126 0 chr15 39273188 39273331 -64221643 + B3 SINE B2 1 161 -55 4 884 329 353 52 7 chr15 39274124 39274278 -64220696 - MER20 DNA MER1_type -37 182 22 4 884 494 308 101 44 chr15 39274511 39274759 -64220215 - MER2 DNA MER2_type -1 344 83 4 884 822 217 127 0 chr15 39276010 39276199 -64218775 - B3 SINE B2 -3 213 1 4 884 3934 126 38 22 chr15 39276818 39277453 -64217521 + Lx LINE L1 5974 6618 -36 4 884 351 103 15 0 chr15 39277512 39277580 -64217394 + L1_Mus4 LINE L1 6567 6635 -1 4 884 337 284 56 21 chr15 39277845 39278008 -64216966 - MIRb SINE MIR -67 201 33 4 884 552 272 83 18 chr15 39278644 39278861 -64216113 - MER44D DNA MER2_type -6 699 470 4 884 234 211 98 73 chr15 39278883 39278965 -64216009 - MER44D DNA MER2_type -570 135 52 4 884 633 288 138 43 chr15 39279617 39280176 -64214798 - L1MDa LINE L1 -4144 2489 1862 4 884 2183 104 62 16 chr15 39280176 39280549 -64214425 - Lx3B LINE L1 -3 6970 6581 4 884 633 288 138 43 chr15 39280549 39280621 -64214353 - L1MDa LINE L1 -4772 1861 1798 4 884 308 296 110 65 chr15 39281662 39281817 -64213157 - MER5A DNA MER1_type -11 178 17 4 884 25 31 0 0 chr15 39282755 39282787 -64212187 + AT_rich Low_complexity Low_complexity 1 32 0 4 884 198 0 0 0 chr15 39284906 39284928 -64210046 + (T)n Simple_repeat Simple_repeat 1 22 0 4 884 247 256 124 0 chr15 39284934 39285063 -64209911 + L1M2 LINE L1 3050 3194 -2949 4 884 1013 175 20 20 chr15 39285063 39285261 -64209713 - ORR1A4 LTR MaLR 0 329 132 4 884 265 268 0 142 chr15 39285194 39285307 -64209667 + B1F SINE Alu 32 128 -21 4 884 661 308 12 0 chr15 39286216 39286388 -64208586 + B4 SINE B4 24 197 -95 4 884 225 0 0 0 chr15 39286473 39286498 -64208476 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 884 633 69 0 0 chr15 39286508 39286595 -64208379 + (TA)n Simple_repeat Simple_repeat 2 88 0 4 884 215 370 0 34 chr15 39286735 39286914 -64208060 + (CATA)n Simple_repeat Simple_repeat 3 175 0 4 884 293 193 0 0 chr15 39286936 39286993 -64207981 + Lx LINE L1 6479 6535 -119 4 884 589 163 19 44 chr15 39286996 39287156 -64207818 + Lx LINE L1 6489 6644 -10 4 884 234 0 0 0 chr15 39287157 39287183 -64207791 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 4 884 21 82 0 0 chr15 39287870 39287919 -64207055 + AT_rich Low_complexity Low_complexity 1 49 0 4 884 646 257 68 19 chr15 39289471 39289677 -64205297 - B3 SINE B2 0 216 1 4 884 45 34 0 0 chr15 39290434 39290493 -64204481 + AT_rich Low_complexity Low_complexity 1 59 0 4 884 287 272 71 36 chr15 39290891 39290975 -64203999 + B1F2 SINE Alu 24 110 -39 4 884 26 0 0 0 chr15 39291626 39291652 -64203322 + AT_rich Low_complexity Low_complexity 1 26 0 4 884 639 57 0 0 chr15 39292045 39292133 -64202841 + (CAG)n Simple_repeat Simple_repeat 1 88 0 4 884 216 0 0 0 chr15 39294674 39294698 -64200276 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 884 285 210 0 0 chr15 39295596 39295658 -64199316 + CT-rich Low_complexity Low_complexity 5 66 0 4 884 339 325 42 0 chr15 39295680 39295800 -64199174 - B1F2 SINE Alu -5 144 20 4 884 373 65 0 0 chr15 39295975 39296037 -64198937 - L1_Mus3 LINE L1 0 6638 6577 4 884 248 137 0 19 chr15 39296173 39296225 -64198749 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 884 697 280 184 35 chr15 39296496 39296811 -64198163 - MTE2b LTR MaLR -8 362 1 4 884 314 315 192 0 chr15 39297597 39297727 -64197247 - HAL1-3A_ME LINE L1 -420 2438 2284 4 884 478 242 32 32 chr15 39297743 39297867 -64197107 - B1_Mur1 SINE Alu -9 140 17 4 884 360 0 0 0 chr15 39297872 39297912 -64197062 + (TCC)n Simple_repeat Simple_repeat 3 42 0 4 884 4071 110 15 7 chr15 39297925 39298522 -64196452 - Lx LINE L1 -6 6648 6047 4 884 799 251 74 13 chr15 39300099 39300329 -64194645 + MER2 DNA MER2_type 95 338 -7 4 884 28 48 0 0 chr15 39300534 39300576 -64194398 + AT_rich Low_complexity Low_complexity 1 42 0 4 884 21 0 0 0 chr15 39301241 39301262 -64193712 + AT_rich Low_complexity Low_complexity 1 21 0 4 884 51 42 0 0 chr15 39301437 39301509 -64193465 + AT_rich Low_complexity Low_complexity 1 72 0 4 884 283 309 20 54 chr15 39302342 39302489 -64192485 - B1F SINE Alu -6 143 2 4 884 28 48 0 0 chr15 39303246 39303288 -64191686 + AT_rich Low_complexity Low_complexity 1 42 0 4 884 40 0 0 51 chr15 39304248 39304307 -64190667 + AT_rich Low_complexity Low_complexity 1 56 0 4 884 273 163 0 0 chr15 39304846 39304895 -64190079 + A-rich Low_complexity Low_complexity 1 49 0 4 884 399 21 0 0 chr15 39305767 39305815 -64189159 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 884 360 111 0 0 chr15 39305866 39305920 -64189054 + (TATG)n Simple_repeat Simple_repeat 1 54 0 4 884 369 328 28 28 chr15 39305920 39306061 -64188913 - RSINE1 SINE B4 -11 154 14 4 884 726 12 0 0 chr15 39307516 39307599 -64187375 + (TTTCC)n Simple_repeat Simple_repeat 3 85 0 4 884 338 299 101 18 chr15 39308281 39308390 -64186584 + PB1 SINE Alu 9 126 -1 4 884 1180 43 0 0 chr15 39308691 39308832 -64186142 + B1_Mm SINE Alu 1 141 -6 4 884 621 0 0 0 chr15 39308833 39308902 -64186072 + (GAAA)n Simple_repeat Simple_repeat 4 72 0 4 884 280 346 48 16 chr15 39309038 39309226 -64185748 + MIR SINE MIR 59 252 -10 4 884 187 360 0 22 chr15 39309556 39309647 -64185327 + MIRc SINE MIR 69 157 -111 4 884 457 243 177 16 chr15 39310652 39310895 -64184079 + B4 SINE B4 3 284 -8 4 884 351 44 0 0 chr15 39312378 39312423 -64182551 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 884 242 343 93 14 chr15 39314110 39314249 -64180725 - RSINE1 SINE B4 -13 152 3 4 884 218 57 36 36 chr15 39314513 39314568 -64180406 + (TAAAA)n Simple_repeat Simple_repeat 1 55 0 4 884 2322 72 112 0 chr15 39314843 39315192 -64179782 - RLTR47_MM LTR ERV1 -84 448 61 4 884 456 302 14 24 chr15 39315381 39315588 -64179386 - MURVY-int LTR ERV1 -109 7343 7139 5 884 608 48 12 0 chr15 39316001 39316085 -64178889 + (TG)n Simple_repeat Simple_repeat 1 85 0 5 884 1838 292 42 25 chr15 39316240 39317101 -64177873 - MuRRS4-int LTR ERV1 -1038 4025 3465 5 884 1129 310 97 35 chr15 39317729 39318568 -64176406 - MuRRS4-int LTR ERV1 -4632 2969 2079 5 884 564 15 0 0 chr15 39319943 39320008 -64174966 + (GA)n Simple_repeat Simple_repeat 1 65 0 5 884 5281 209 80 8 chr15 39320481 39321444 -64173530 - Lx5 LINE L1 -3 7047 6011 5 884 405 0 0 0 chr15 39321444 39321489 -64173485 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 110 5281 209 80 8 chr15 39321489 39321722 -64173252 - Lx5 LINE L1 -1040 6010 5766 5 885 11594 162 39 22 chr15 39321719 39321896 -64173078 - L1_Mur2 LINE L1 -2217 3660 3482 5 885 207 0 0 0 chr15 39321896 39321919 -64173055 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 885 11594 169 46 20 chr15 39321919 39324512 -64170462 - L1_Mur2 LINE L1 -2396 3481 825 5 885 427 212 0 3 chr15 39324720 39324823 -64170151 + L1_Mur2 LINE L1 1269 1369 -4517 5 885 261 0 0 0 chr15 39325169 39325198 -64169776 + (T)n Simple_repeat Simple_repeat 1 29 0 5 885 705 286 18 129 chr15 39325419 39325636 -64169338 - B3A SINE B2 0 193 1 5 885 474 269 94 38 chr15 39325684 39325950 -64169024 - L1M5 LINE L1 -1971 4175 3895 5 885 22 35 0 0 chr15 39325986 39326015 -64168959 + AT_rich Low_complexity Low_complexity 1 29 0 5 885 559 255 74 35 chr15 39326209 39326412 -64168562 - B3 SINE B2 -2 214 4 5 885 217 200 0 22 chr15 39326515 39326561 -64168413 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 885 466 238 216 35 chr15 39326658 39326889 -64168085 - Lx7 LINE L1 -206 7490 7218 5 885 28 48 0 0 chr15 39326898 39326940 -64168034 + AT_rich Low_complexity Low_complexity 1 42 0 5 885 20068 32 0 2 chr15 39327529 39329941 -64165033 + L1Md_T LINE L1 3178 5586 -297 5 885 8361 32 2 0 chr15 39329941 39330935 -64164039 + L1Md_T LINE L1 5587 6582 0 5 885 278 156 16 0 chr15 39331431 39331495 -64163479 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 885 663 281 9 107 chr15 39331527 39331742 -64163232 - B3 SINE B2 -21 195 2 5 885 229 253 4 65 chr15 39331785 39331855 -64163119 + B4A SINE B4 2 69 -223 5 885 180 125 0 0 chr15 39331883 39331915 -64163059 + (CAT)n Simple_repeat Simple_repeat 2 33 0 5 885 1085 214 180 10 chr15 39331915 39332211 -64162763 - MTC LTR MaLR -69 352 3 5 885 3209 50 0 8 chr15 39332641 39333040 -64161934 + MTA_Mm LTR MaLR 1 396 0 5 885 29 0 0 0 chr15 39333118 39333147 -64161827 + AT_rich Low_complexity Low_complexity 1 29 0 5 885 4378 203 56 13 chr15 39333147 39334154 -64160820 - Lx9 LINE L1 0 7644 6595 5 885 319 281 70 21 chr15 39334286 39334428 -64160546 + L1M5 LINE L1 4517 4665 -1481 5 885 300 341 109 30 chr15 39334533 39334763 -64160211 + L1M5 LINE L1 4811 5058 -1088 5 885 5613 158 16 9 chr15 39334803 39335778 -64159196 - Lx2 LINE L1 0 6997 6016 5 885 1762 131 0 0 chr15 39335791 39336051 -64158923 - L1_Mur1 LINE L1 -814 5072 4813 5 885 2309 198 31 16 chr15 39336706 39337194 -64157780 - RLTR12B LTR ERVK -22 506 12 5 885 314 219 65 52 chr15 39337804 39337881 -64157093 + B1_Mus2 SINE Alu 70 147 0 5 885 324 242 15 0 chr15 39337895 39337961 -64157013 + B1_Mur1 SINE Alu 82 148 -1 5 885 1067 271 112 19 chr15 39338710 39339281 -64155693 - L1MC LINE L1 -1244 4902 4279 5 885 393 22 0 0 chr15 39339521 39339567 -64155407 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 885 251 319 16 4 chr15 39340254 39340325 -64154649 - tRNA-Ala-GCA tRNA tRNA -3 72 3 5 885 222 375 14 0 chr15 39340261 39340333 -64154641 - ID4 SINE ID -10 73 1 5 885 810 81 0 0 chr15 39340434 39340545 -64154429 + (ATG)n Simple_repeat Simple_repeat 1 111 0 5 885 21 0 0 0 chr15 39341163 39341184 -64153790 + AT_rich Low_complexity Low_complexity 1 21 0 5 885 25 31 0 0 chr15 39341851 39341883 -64153091 + AT_rich Low_complexity Low_complexity 1 32 0 5 885 26 0 0 0 chr15 39342040 39342066 -64152908 + AT_rich Low_complexity Low_complexity 1 26 0 5 885 1030 111 135 21 chr15 39342066 39342259 -64152715 - Lx3A LINE L1 -3 6978 6764 5 885 23 0 0 0 chr15 39343730 39343753 -64151221 + AT_rich Low_complexity Low_complexity 1 23 0 5 885 243 331 57 99 chr15 39344837 39344978 -64149996 + MTEa LTR MaLR 22 156 -223 5 885 1396 212 97 7 chr15 39344989 39345297 -64149677 - ORR1C1 LTR MaLR -42 336 1 5 885 776 309 88 11 chr15 39345339 39345624 -64149350 + ORR1D2 LTR MaLR 8 314 -56 5 885 414 289 54 8 chr15 39345967 39346096 -64148878 + ID_B1 SINE B4 90 224 0 5 885 1211 41 0 0 chr15 39346699 39346846 -64148128 - B1_Mus2 SINE Alu 0 147 1 5 885 342 0 0 0 chr15 39349945 39349983 -64144991 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 5 885 200 295 16 0 chr15 39350293 39350354 -64144620 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 885 25 31 0 0 chr15 39350373 39350405 -64144569 + AT_rich Low_complexity Low_complexity 1 32 0 5 885 666 264 78 55 chr15 39350564 39350857 -64144117 - Lx7 LINE L1 -334 7362 7063 5 885 4155 98 4 129 chr15 39350867 39351281 -64143693 + L1_Mus3 LINE L1 5974 6381 -257 5 885 1045 90 7 0 chr15 39351281 39351425 -64143549 + B1_Mus1 SINE Alu 2 146 -2 5 885 468 0 0 0 chr15 39351425 39351477 -64143497 + (TAA)n Simple_repeat Simple_repeat 2 53 0 5 885 4155 98 4 129 chr15 39351477 39351812 -64143162 + L1_Mus3 LINE L1 6382 6629 -9 5 885 4137 238 109 138 chr15 39351813 39352832 -64142142 - L1_Mur3 LINE L1 -646 5234 4109 5 885 1122 68 7 0 chr15 39352832 39352978 -64141996 - B1_Mus1 SINE Alu 0 148 2 5 885 4137 238 109 138 chr15 39352978 39352999 -64141975 - L1_Mur3 LINE L1 -1772 4108 4072 5 885 207 0 0 0 chr15 39352999 39353022 -64141952 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 5 885 4137 238 109 138 chr15 39353022 39353155 -64141819 - L1_Mur3 LINE L1 -1809 4071 3926 5 885 1184 179 33 5 chr15 39353155 39353368 -64141606 + URR1B DNA MER1_type 7 225 0 5 885 4137 238 109 138 chr15 39353368 39353649 -64141325 - L1_Mur3 LINE L1 -1809 3925 3614 5 885 5255 113 38 38 chr15 39353649 39354515 -64140459 + Lx LINE L1 5786 6651 -3 5 885 4137 238 109 138 chr15 39354515 39354962 -64140012 - L1_Mur3 LINE L1 -2267 3613 3115 5 885 1357 193 20 23 chr15 39354962 39355264 -64139710 - Lx5 LINE L1 -4 7046 6746 5 885 4137 238 109 138 chr15 39355264 39355896 -64139078 - L1_Mur3 LINE L1 -2766 3114 2566 5 885 434 244 54 88 chr15 39357386 39357397 -64137577 - B4 SINE B4 -69 223 215 5 885 735 12 0 0 chr15 39357397 39357481 -64137493 + (TTTC)n Simple_repeat Simple_repeat 1 84 0 5 885 918 78 15 15 chr15 39357481 39357598 -64137376 - B1_Mus1 SINE Alu -13 135 18 5 885 434 244 54 88 chr15 39357598 39357617 -64137357 - B4 SINE B4 -78 214 81 5 885 571 152 133 311 chr15 39358241 39358784 -64136190 - RMER6C LTR ERVK -134 556 111 5 885 213 222 0 0 chr15 39359728 39359791 -64135183 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 885 6034 75 103 0 chr15 39360035 39360897 -64134077 - L1_Mus3 LINE L1 0 6638 5688 5 885 2232 106 0 17 chr15 39361246 39361259 -64133715 - Lx3A LINE L1 -4 6977 6966 5 885 348 24 0 0 chr15 39361259 39361300 -64133674 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 5 885 2232 106 0 17 chr15 39361300 39361631 -64133343 - Lx3A LINE L1 -16 6965 6639 5 885 3171 104 29 2 chr15 39361631 39362083 -64132891 - L1_Mur1 LINE L1 -44 5842 5379 5 885 290 268 81 47 chr15 39362963 39363112 -64131862 - Charlie4a DNA MER1_type -14 494 341 5 885 2939 141 10 0 chr15 39363114 39363597 -64131377 + L1_Mur2 LINE L1 3629 4116 -1761 5 885 270 125 0 0 chr15 39363678 39363726 -64131248 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 5 885 952 92 0 0 chr15 39363739 39363870 -64131104 - B1_Mus1 SINE Alu -2 146 16 5 885 1767 197 8 16 chr15 39363879 39364255 -64130719 - Lx2B LINE L1 -8 6992 6620 5 885 2714 60 134 0 chr15 39364485 39364865 -64130109 + L1_Mus2 LINE L1 6136 6566 0 5 885 21 82 0 0 chr15 39367064 39367113 -64127861 + AT_rich Low_complexity Low_complexity 1 49 0 5 885 273 182 0 0 chr15 39368149 39368204 -64126770 + (TA)n Simple_repeat Simple_repeat 1 55 0 5 885 30 0 0 0 chr15 39368626 39368656 -64126318 + AT_rich Low_complexity Low_complexity 1 30 0 5 885 519 138 0 0 chr15 39372564 39372651 -64122323 + (CA)n Simple_repeat Simple_repeat 1 87 0 5 885 26 30 0 0 chr15 39372813 39372846 -64122128 + AT_rich Low_complexity Low_complexity 1 33 0 5 885 1188 194 9 14 chr15 39373258 39373478 -64121496 + URR1B DNA MER1_type 7 225 0 5 885 45 34 0 0 chr15 39374779 39374838 -64120136 + AT_rich Low_complexity Low_complexity 1 59 0 5 885 441 0 0 0 chr15 39374920 39374969 -64120005 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 885 223 293 15 0 chr15 39375217 39375314 -64119660 + MIRm SINE MIR 32 137 -139 5 885 370 252 187 0 chr15 39376582 39376689 -64118285 + B1F1 SINE Alu 23 149 0 5 885 186 115 58 0 chr15 39377194 39377246 -64117728 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 885 443 393 0 26 chr15 39377724 39377848 -64117126 + RSINE1 SINE B4 15 138 -27 5 885 414 114 0 0 chr15 39377848 39377918 -64117056 + (TG)n Simple_repeat Simple_repeat 1 70 0 5 885 443 393 0 26 chr15 39377918 39377947 -64117027 + RSINE1 SINE B4 139 163 -2 5 885 302 181 14 0 chr15 39378033 39378105 -64116869 + Lx3C LINE L1 6898 6970 -6 5 885 548 361 117 31 chr15 39378225 39378712 -64116262 + L2a LINE L2 2890 3421 -5 5 885 29 62 0 36 chr15 39380616 39380699 -64114275 + AT_rich Low_complexity Low_complexity 1 80 0 5 885 332 266 18 0 chr15 39380974 39381087 -64113887 + (TA)n Simple_repeat Simple_repeat 2 116 0 5 885 203 61 30 0 chr15 39382112 39382145 -64112829 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 5 885 213 65 0 0 chr15 39382627 39382658 -64112316 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 5 885 27 62 0 0 chr15 39382896 39382944 -64112030 + AT_rich Low_complexity Low_complexity 1 48 0 5 885 207 0 0 0 chr15 39384146 39384169 -64110805 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 885 201 306 105 53 chr15 39384704 39384856 -64110118 + MIRm SINE MIR 10 169 -39 5 885 216 0 0 0 chr15 39384960 39384984 -64109990 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 885 24 32 0 0 chr15 39386065 39386096 -64108878 + AT_rich Low_complexity Low_complexity 1 31 0 5 885 189 147 0 0 chr15 39386900 39386934 -64108040 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 5 885 27 49 0 0 chr15 39387220 39387261 -64107713 + AT_rich Low_complexity Low_complexity 1 41 0 6 885 192 364 26 43 chr15 39387929 39388044 -64106930 - L2 LINE L2 -954 2465 2353 6 885 1876 187 134 24 chr15 39388534 39388989 -64105985 - RLTR16 LTR ERVK 0 505 1 6 885 22 80 0 0 chr15 39390217 39390267 -64104707 + AT_rich Low_complexity Low_complexity 1 50 0 6 885 431 88 29 0 chr15 39390273 39390341 -64104633 + (CGTG)n Simple_repeat Simple_repeat 1 70 0 6 885 295 289 0 0 chr15 39390594 39390670 -64104304 - ID4_ SINE ID -6 77 2 6 885 9927 75 22 3 chr15 39390939 39392370 -64102604 - Lx3_Mus LINE L1 -9 7000 5539 6 885 25 65 0 0 chr15 39392442 39392488 -64102486 + AT_rich Low_complexity Low_complexity 1 46 0 6 885 581 279 23 0 chr15 39392622 39392751 -64102223 + RSINE1 SINE B4 11 142 -23 6 885 22 35 0 0 chr15 39393247 39393276 -64101698 + AT_rich Low_complexity Low_complexity 1 29 0 6 885 702 35 0 0 chr15 39393397 39393482 -64101492 + (TTTC)n Simple_repeat Simple_repeat 2 86 0 6 885 21 36 0 0 chr15 39393598 39393626 -64101348 + AT_rich Low_complexity Low_complexity 1 28 0 6 885 342 296 139 82 chr15 39393762 39394186 -64100788 - L1M2 LINE L1 -565 5735 5288 6 885 464 254 123 0 chr15 39394236 39394350 -64100624 + B3A SINE B2 57 184 -14 6 885 1227 273 106 79 chr15 39394376 39395615 -64099359 - L1M2 LINE L1 -864 5279 4008 6 885 2666 57 3 25 chr15 39395682 39396040 -64098934 - L1_Mus2 LINE L1 0 6566 6217 6 885 835 319 13 66 chr15 39396105 39396410 -64098564 + B4 SINE B4 2 290 -2 6 885 204 67 0 0 chr15 39396469 39396499 -64098475 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 885 25 65 0 0 chr15 39399161 39399207 -64095767 + AT_rich Low_complexity Low_complexity 1 46 0 6 885 682 180 0 0 chr15 39399552 39399674 -64095300 + B1_Mur4 SINE Alu 28 149 -1 6 885 232 25 0 70 chr15 39400136 39400179 -64094795 + (TTA)n Simple_repeat Simple_repeat 1 40 0 6 885 30 59 0 0 chr15 39401542 39401593 -64093381 + AT_rich Low_complexity Low_complexity 1 51 0 6 885 668 39 0 0 chr15 39401668 39401765 -64093209 - B1_Mm SINE Alu 0 149 53 6 885 315 0 0 0 chr15 39402945 39402980 -64091994 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 885 8699 93 33 30 chr15 39402980 39404301 -64090673 - Lx3_Mus LINE L1 -20 6989 5664 6 885 1164 117 117 0 chr15 39404506 39404702 -64090272 - Lx2 LINE L1 0 6997 6779 6 885 643 281 159 7 chr15 39406221 39406511 -64088463 - MLT1B LTR MaLR -56 334 1 6 885 509 306 102 21 chr15 39406559 39406713 -64088261 + B3 SINE B2 1 173 -43 6 885 375 23 0 0 chr15 39406713 39406757 -64088217 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 885 509 306 102 21 chr15 39406757 39406789 -64088185 + B3 SINE B2 174 201 -15 6 885 2755 158 50 0 chr15 39407638 39408138 -64086836 - RLTR11A LTR ERVK -3 525 1 6 885 521 337 20 0 chr15 39408164 39408366 -64086608 + Lx8 LINE L1 7146 7351 -122 6 885 1477 261 114 14 chr15 39408712 39409246 -64085728 - Lx6 LINE L1 -23 7437 6493 6 885 308 284 12 24 chr15 39410957 39411040 -64083934 - ID4 SINE ID 0 83 2 6 885 1657 31 0 0 chr15 39411082 39411275 -64083699 - B2_Mm1t SINE B2 0 193 1 6 885 23 0 0 0 chr15 39412048 39412071 -64082903 + AT_rich Low_complexity Low_complexity 1 23 0 6 885 1449 196 46 57 chr15 39412278 39412692 -64082282 - ORR1D1 LTR MaLR -12 367 1 6 885 24 85 0 0 chr15 39413018 39413077 -64081897 + AT_rich Low_complexity Low_complexity 1 59 0 6 885 2226 295 80 84 chr15 39413747 39414743 -64080231 - Lx8 LINE L1 -1 7472 6481 6 885 408 40 0 0 chr15 39414743 39414793 -64080181 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 885 28 61 0 0 chr15 39415120 39415169 -64079805 + AT_rich Low_complexity Low_complexity 1 49 0 6 885 23 54 0 0 chr15 39415484 39415521 -64079453 + AT_rich Low_complexity Low_complexity 1 37 0 6 885 22 35 0 0 chr15 39415560 39415589 -64079385 + AT_rich Low_complexity Low_complexity 1 29 0 6 885 233 318 115 26 chr15 39416110 39416223 -64078751 - MIRb SINE MIR -66 202 80 6 885 229 359 0 11 chr15 39416397 39416490 -64078484 + Tigger14a DNA MER2_type 207 298 -26 6 885 23 0 0 0 chr15 39418732 39418755 -64076219 + AT_rich Low_complexity Low_complexity 1 23 0 6 885 289 338 37 37 chr15 39418923 39419058 -64075916 - B1F SINE Alu -11 138 4 6 885 3092 56 13 0 chr15 39420045 39420440 -64074534 - MTB LTR MaLR 0 400 1 6 885 294 315 84 8 chr15 39421657 39421788 -64073186 + B1F SINE Alu 1 141 -8 6 885 699 54 0 0 chr15 39421799 39421891 -64073083 + (GGA)n Simple_repeat Simple_repeat 3 94 0 6 885 7561 83 16 4 chr15 39422587 39423619 -64071355 - L1_Mus3 LINE L1 -8 6630 5587 6 885 3179 124 4 2 chr15 39423619 39424104 -64070870 + L1_Mus3 LINE L1 5080 5565 -318 6 885 8580 110 57 34 chr15 39424111 39425650 -64069324 - Lx2A1 LINE L1 -2 7006 5422 6 885 295 281 20 20 chr15 39425624 39425722 -64069252 - L1M4 LINE L1 -1459 4687 4590 6 885 318 248 217 16 chr15 39426034 39426292 -64068682 - L1M4 LINE L1 -1736 4410 4101 6 885 258 336 36 22 chr15 39426307 39426444 -64068530 + L4 LINE RTE 1583 1721 -308 6 885 26 0 0 0 chr15 39427195 39427221 -64067753 + AT_rich Low_complexity Low_complexity 1 26 0 6 885 442 248 0 34 chr15 39428083 39428200 -64066774 - PB1D9 SINE Alu -6 114 2 6 885 228 330 96 10 chr15 39428515 39428619 -64066355 - Lx8 LINE L1 -248 7225 7113 6 885 429 97 0 0 chr15 39428929 39429001 -64065973 + (TG)n Simple_repeat Simple_repeat 2 73 0 6 885 387 0 0 0 chr15 39429709 39429752 -64065222 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 885 469 278 84 19 chr15 39430789 39430943 -64064031 - RSINE1 SINE B4 0 165 2 6 885 22 35 0 0 chr15 39431653 39431682 -64063292 + AT_rich Low_complexity Low_complexity 1 29 0 6 885 25 0 0 0 chr15 39431695 39431720 -64063254 + AT_rich Low_complexity Low_complexity 1 25 0 6 885 21 0 0 0 chr15 39432193 39432214 -64062760 + AT_rich Low_complexity Low_complexity 1 21 0 6 885 6744 146 67 121 chr15 39432214 39433820 -64061154 + ORR1A4-int LTR MaLR 444 1963 0 6 885 1759 138 52 52 chr15 39433820 39434149 -64060825 + ORR1A4 LTR MaLR 1 329 0 6 885 22 56 0 0 chr15 39434152 39434188 -64060786 + AT_rich Low_complexity Low_complexity 1 36 0 6 885 220 94 18 70 chr15 39434515 39434572 -64060402 + (TTTG)n Simple_repeat Simple_repeat 3 56 0 6 885 588 29 0 0 chr15 39435582 39435652 -64059322 + (TC)n Simple_repeat Simple_repeat 2 71 0 6 885 1223 89 39 16 chr15 39435713 39435895 -64059079 - B2_Mm1t SINE B2 -7 186 1 6 885 252 301 102 39 chr15 39436115 39436243 -64058731 - MIRb SINE MIR -21 247 112 6 885 258 125 0 0 chr15 39436362 39436410 -64058564 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 6 885 21 36 0 0 chr15 39437808 39437836 -64057138 + AT_rich Low_complexity Low_complexity 1 28 0 6 885 22 0 0 0 chr15 39438040 39438062 -64056912 + AT_rich Low_complexity Low_complexity 1 22 0 6 885 207 0 0 0 chr15 39438251 39438274 -64056700 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 885 808 262 14 10 chr15 39438285 39438493 -64056481 + B3 SINE B2 1 209 -7 6 885 522 0 0 0 chr15 39438672 39438730 -64056244 + (TA)n Simple_repeat Simple_repeat 2 59 0 6 885 26 30 0 0 chr15 39438786 39438819 -64056155 + AT_rich Low_complexity Low_complexity 1 33 0 6 885 2647 92 8 10 chr15 39438896 39439293 -64055681 - Lx2 LINE L1 -8 6989 6594 6 885 589 247 161 0 chr15 39439390 39439576 -64055398 + B3 SINE B2 1 216 0 6 885 3957 92 10 12 chr15 39439784 39440370 -64054604 - Lx2A LINE L1 0 7008 6424 6 885 310 304 194 81 chr15 39442031 39442289 -64052685 - B4A SINE B4 -4 288 2 6 885 717 137 0 0 chr15 39442322 39442439 -64052535 + (CCTA)n Simple_repeat Simple_repeat 1 117 0 6 885 32 67 0 0 chr15 39442788 39442848 -64052126 + AT_rich Low_complexity Low_complexity 1 60 0 6 885 198 325 9 14 chr15 39443042 39443117 -64051857 + L2b LINE L2 3104 3180 -207 6 885 189 196 0 0 chr15 39443483 39443529 -64051445 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 6 885 360 64 0 0 chr15 39444282 39444329 -64050645 + (CTATT)n Simple_repeat Simple_repeat 2 48 0 6 885 574 293 136 31 chr15 39444618 39444962 -64050012 - MTE2a LTR MaLR -14 407 27 6 885 22 35 0 0 chr15 39445044 39445073 -64049901 + AT_rich Low_complexity Low_complexity 1 29 0 6 885 328 331 45 45 chr15 39445144 39445321 -64049653 - L1M5 LINE L1 -382 5742 5566 6 885 293 231 26 96 chr15 39445329 39445444 -64049530 + PB1D10 SINE Alu 3 109 -8 6 885 24 32 0 0 chr15 39445924 39445955 -64049019 + AT_rich Low_complexity Low_complexity 1 31 0 6 885 268 386 45 8 chr15 39446427 39446560 -64048414 - MIRc SINE MIR -118 150 13 6 885 270 0 0 0 chr15 39450521 39450551 -64044423 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 885 522 104 0 0 chr15 39450817 39450894 -64044080 + B1_Mus2 SINE Alu 71 147 0 6 110 9815 127 29 8 chr15 39451342 39453744 -64041230 - Lx LINE L1 -1 6653 4192 6 886 23 0 0 0 chr15 39454461 39454484 -64040490 + AT_rich Low_complexity Low_complexity 1 23 0 6 886 4737 97 81 1 chr15 39454858 39455547 -64039427 - Lx LINE L1 0 6654 5911 6 886 1699 125 7 7 chr15 39455547 39455845 -64039129 + L1_Mur2 LINE L1 5156 5453 -424 6 886 494 16 0 16 chr15 39456621 39456685 -64038289 + (TTTTG)n Simple_repeat Simple_repeat 2 64 0 6 886 22 56 0 0 chr15 39456878 39456914 -64038060 + AT_rich Low_complexity Low_complexity 1 36 0 6 886 423 0 0 0 chr15 39457354 39457401 -64037573 + (TATG)n Simple_repeat Simple_repeat 2 48 0 6 886 288 77 0 0 chr15 39458820 39458859 -64036115 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 6 886 1514 197 64 22 chr15 39459027 39459386 -64035588 + ORR1D1 LTR MaLR 1 374 0 6 886 21 57 0 0 chr15 39459525 39459560 -64035414 + AT_rich Low_complexity Low_complexity 1 35 0 7 886 606 339 16 5 chr15 39461485 39461678 -64033296 - B3A SINE B2 -3 195 1 7 886 235 191 97 43 chr15 39462439 39462532 -64032442 - L1ME1 LINE L1 -14 6164 6067 7 886 456 258 141 25 chr15 39462645 39462938 -64032036 - L1ME1 LINE L1 -265 5914 5587 7 886 192 125 0 0 chr15 39463414 39463446 -64031528 + (TA)n Simple_repeat Simple_repeat 2 33 0 7 886 192 125 0 0 chr15 39463574 39463606 -64031368 + (TA)n Simple_repeat Simple_repeat 2 33 0 7 886 998 207 89 9 chr15 39464139 39464363 -64030611 - RLTR18-int LTR ERVK -667 4694 4453 7 886 519 126 0 0 chr15 39464497 39464592 -64030382 + (TC)n Simple_repeat Simple_repeat 1 95 0 7 886 427 224 38 81 chr15 39464654 39464814 -64030160 - RLTR18-int LTR ERVK -996 4365 4213 7 886 21 0 0 0 chr15 39464943 39464964 -64030010 + AT_rich Low_complexity Low_complexity 1 21 0 7 886 1028 151 118 15 chr15 39465294 39465489 -64029485 + URR1A DNA MER1_type 10 224 -2 7 886 585 118 178 0 chr15 39466007 39466142 -64028832 - RLTR42-int LTR ERVK -3395 2127 1969 7 886 2655 58 86 0 chr15 39466142 39466490 -64028484 + L1_Mus3 LINE L1 6243 6620 -18 7 886 342 0 0 0 chr15 39467033 39467071 -64027903 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 886 242 227 34 11 chr15 39467124 39467213 -64027761 + (TA)n Simple_repeat Simple_repeat 1 91 0 7 886 207 0 0 0 chr15 39467214 39467237 -64027737 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 886 279 330 22 11 chr15 39467919 39468008 -64026966 - L2b LINE L2 0 3375 3286 7 886 617 313 30 12 chr15 39469372 39469540 -64025434 - B3A SINE B2 -25 173 3 7 886 291 233 33 49 chr15 39469768 39469890 -64025084 - L1MA6 LINE L1 -383 5917 5798 7 886 537 272 53 42 chr15 39470282 39470472 -64024502 + MLT1C LTR MaLR 1 183 -207 7 886 285 314 113 13 chr15 39470659 39470888 -64024086 - L1MA6 LINE L1 -634 5657 5406 7 886 331 275 124 39 chr15 39471970 39472148 -64022826 + L1M2 LINE L1 4754 4946 -1197 7 886 180 77 0 0 chr15 39472323 39472349 -64022625 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 7 886 23 33 0 0 chr15 39472457 39472487 -64022487 + AT_rich Low_complexity Low_complexity 1 30 0 7 886 307 246 27 14 chr15 39472678 39472752 -64022222 - PB1D10 SINE Alu -9 108 34 7 886 277 287 53 27 chr15 39473003 39473153 -64021821 - MTEa LTR MaLR -22 357 201 7 886 1860 171 80 14 chr15 39476412 39476774 -64018200 + ORR1B1 LTR MaLR 9 394 0 7 886 231 218 18 18 chr15 39477004 39477060 -64017914 + Charlie13a DNA Charlie 869 924 -590 7 886 1018 39 62 0 chr15 39477707 39477835 -64017139 + B1_Mus2 SINE Alu 2 137 -10 7 886 271 0 0 49 chr15 39477835 39477876 -64017098 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 7 886 180 77 0 0 chr15 39478941 39478967 -64016007 + (G)n Simple_repeat Simple_repeat 1 26 0 7 886 378 75 29 15 chr15 39479476 39479544 -64015430 + (TCTCC)n Simple_repeat Simple_repeat 4 72 0 7 886 531 0 0 0 chr15 39479560 39479619 -64015355 + (TC)n Simple_repeat Simple_repeat 2 60 0 7 886 875 169 11 55 chr15 39479632 39479814 -64015160 - ORR1A4 LTR MaLR -63 266 93 7 886 870 161 169 36 chr15 39479777 39480002 -64014972 - MT2B LTR ERVL -346 255 1 7 886 3287 48 5 0 chr15 39480375 39480769 -64014205 - MTA_Mm LTR MaLR 0 396 1 7 886 904 311 23 66 chr15 39480791 39481094 -64013880 + B4A SINE B4 2 291 -1 7 886 369 0 0 0 chr15 39481096 39481137 -64013837 + (TC)n Simple_repeat Simple_repeat 1 41 0 7 886 297 0 0 0 chr15 39481137 39481169 -64013805 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 886 26 30 0 0 chr15 39481206 39481239 -64013735 + AT_rich Low_complexity Low_complexity 1 33 0 7 886 354 216 90 30 chr15 39481333 39481433 -64013541 - MER2 DNA MER2_type -2 343 238 7 886 301 264 16 113 chr15 39481402 39481526 -64013448 - PB1D10 SINE Alu -5 112 1 7 886 1205 55 0 0 chr15 39482187 39482333 -64012641 + B1_Mm SINE Alu 2 147 0 7 886 342 45 0 0 chr15 39482977 39483021 -64011953 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 886 2205 85 0 30 chr15 39483114 39483452 -64011522 - Lx LINE L1 -670 5966 5639 7 886 3916 106 89 25 chr15 39483453 39484119 -64010855 + Lx LINE L1 5928 6635 -19 7 886 513 296 254 23 chr15 39484302 39484648 -64010326 + MER21B LTR ERV1 279 704 -159 7 886 287 296 35 127 chr15 39484824 39485083 -64009891 + MIR SINE MIR 26 260 -2 7 886 423 309 8 39 chr15 39485084 39485212 -64009762 + L2a LINE L2 3299 3422 -4 7 886 229 333 78 0 chr15 39485218 39485320 -64009654 + MIR SINE MIR 120 229 -33 7 886 7666 71 11 0 chr15 39485885 39486973 -64008001 - L1_Mus3 LINE L1 -6 6632 5533 7 886 228 149 0 0 chr15 39487008 39487055 -64007919 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 7 886 1105 90 7 0 chr15 39487056 39487201 -64007773 - B1_Mus1 SINE Alu -1 147 2 7 886 376 269 65 0 chr15 39488036 39488129 -64006845 + B1F1 SINE Alu 10 108 -41 7 886 396 0 0 0 chr15 39489054 39489098 -64005876 + (CATA)n Simple_repeat Simple_repeat 2 45 0 7 886 547 256 43 28 chr15 39489186 39489327 -64005647 + B3A SINE B2 10 152 -46 7 886 423 52 0 0 chr15 39489328 39489386 -64005588 + (CA)n Simple_repeat Simple_repeat 2 59 0 7 886 261 0 0 0 chr15 39490116 39490145 -64004829 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 886 242 281 30 50 chr15 39490153 39490254 -64004720 + L2a LINE L2 3328 3426 0 7 886 414 0 0 0 chr15 39490283 39490329 -64004645 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 886 249 330 25 47 chr15 39492736 39492906 -64002068 - MIR SINE MIR -89 187 16 7 886 1246 97 0 28 chr15 39494862 39495043 -63999931 + B2_Mm2 SINE B2 1 176 -19 7 886 246 298 85 19 chr15 39495163 39495269 -63999705 + PB1D9 SINE Alu 8 120 0 7 886 1236 149 51 5 chr15 39495842 39496057 -63998917 - URR1B DNA MER1_type 0 225 1 7 886 204 271 0 67 chr15 39496626 39496701 -63998273 + CT-rich Low_complexity Low_complexity 1 70 0 7 886 1353 134 37 5 chr15 39497453 39497670 -63997304 + URR1B DNA MER1_type 2 225 0 7 886 279 283 76 0 chr15 39498109 39498201 -63996773 - MER3 DNA MER1_type 0 209 111 7 886 225 336 151 14 chr15 39498892 39499031 -63995943 - MLT1N2 LTR MaLR -291 271 114 7 886 641 131 256 0 chr15 39499305 39499473 -63995501 - Lx4A LINE L1 -11 7047 6837 7 886 423 0 0 0 chr15 39500119 39500166 -63994808 + (TGG)n Simple_repeat Simple_repeat 1 47 0 1 886 197 33 33 0 chr15 39500642 39500672 -63994302 + (CAG)n Simple_repeat Simple_repeat 2 32 0 2 886 689 166 338 0 chr15 39501066 39501223 -63993751 - B3 SINE B2 -4 212 3 3 886 518 279 122 51 chr15 39502154 39502549 -63992425 - MLT1E2 LTR MaLR -161 466 52 4 886 194 308 68 8 chr15 39503375 39503493 -63991481 + MIRb SINE MIR 29 153 -115 5 886 261 300 176 61 chr15 39503971 39504216 -63990758 + B4A SINE B4 1 273 -19 6 886 1311 94 15 15 chr15 39507022 39507217 -63987757 - B2_Mm2 SINE B2 0 195 1 7 886 850 197 64 29 chr15 39507250 39507454 -63987520 + B3 SINE B2 5 215 -1 8 886 36 23 0 0 chr15 39508601 39508644 -63986330 + AT_rich Low_complexity Low_complexity 1 43 0 9 886 1118 70 13 0 chr15 39508773 39508929 -63986045 + (TTTC)n Simple_repeat Simple_repeat 2 159 0 1 886 526 331 0 0 chr15 39508980 39509122 -63985852 - RSINE1 SINE B4 -20 145 4 1 886 307 275 160 7 chr15 39509520 39509670 -63985304 - L2 LINE L2 -652 2767 2595 1 886 369 304 163 74 chr15 39509688 39510013 -63984961 - MLT1B LTR MaLR -3 387 18 1 886 185 179 69 35 chr15 39510405 39510463 -63984511 - L2 LINE L2 -1607 1812 1753 1 886 28 0 0 0 chr15 39514039 39514067 -63980907 + AT_rich Low_complexity Low_complexity 1 28 0 1 886 288 0 0 0 chr15 39515228 39515260 -63979714 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 886 1174 194 277 10 chr15 39516226 39516518 -63978456 - ORR1D1 LTR MaLR -3 371 2 1 886 391 303 83 18 chr15 39518141 39518309 -63976665 - B3A SINE B2 -5 193 15 1 886 1698 193 66 24 chr15 39518358 39518735 -63976239 - RMER10B LTR ERVL 0 398 6 1 886 292 305 11 0 chr15 39519832 39519927 -63975047 - L3 LINE CR1 -259 4230 4135 1 886 265 311 47 0 chr15 39520636 39520742 -63974232 - L3 LINE CR1 -860 3629 3519 1 886 190 306 91 35 chr15 39520804 39520966 -63974008 - MIRb SINE MIR -60 208 34 2 886 552 68 0 0 chr15 39521929 39522002 -63972972 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 886 1692 172 24 173 chr15 39522635 39523086 -63971888 + ORR1C2 LTR MaLR 1 384 0 2 886 23 68 0 0 chr15 39524834 39524878 -63970096 + AT_rich Low_complexity Low_complexity 1 44 0 2 886 786 182 24 12 chr15 39524998 39525165 -63969809 - B2_Mm2 SINE B2 -25 170 2 2 886 1012 296 142 29 chr15 39525166 39526033 -63968941 - L1M5 LINE L1 -2160 3986 3022 2 886 236 136 17 17 chr15 39526553 39526613 -63968361 - Lx9 LINE L1 -114 7530 7471 2 886 11296 14 0 0 chr15 39526874 39528856 -63966118 - L1Md_T LINE L1 0 6582 4601 2 886 38701 30 0 0 chr15 39528856 39535519 -63959455 - L1Md_T LINE L1 0 6585 1 2 886 500 233 11 122 chr15 39535526 39535707 -63959267 - B3A SINE B2 0 198 38 2 886 32432 69 58 12 chr15 39535721 39541361 -63953613 - L1Md_F2 LINE L1 -12 6570 631 3 886 2001 180 103 12 chr15 39541603 39542087 -63952887 + RLTR12B LTR ERVK 1 528 0 3 886 23 54 0 0 chr15 39542268 39542305 -63952669 + AT_rich Low_complexity Low_complexity 1 37 0 3 886 241 371 0 0 chr15 39542352 39542414 -63952560 - RSINE1 SINE B4 -2 163 102 3 886 228 164 71 18 chr15 39543219 39543275 -63951699 - L1_Rod LINE L1 -163 5684 5626 3 886 284 286 142 9 chr15 39543944 39544050 -63950924 - MLT2B4 LTR ERVL -47 520 401 3 886 509 253 36 67 chr15 39544084 39544279 -63950695 - MLT2B4 LTR ERVL -312 244 56 3 886 429 248 0 0 chr15 39545303 39545416 -63949558 + (TA)n Simple_repeat Simple_repeat 2 114 0 3 886 2190 121 15 6 chr15 39545513 39545847 -63949127 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 886 22685 70 30 19 chr15 39545847 39548882 -63946092 + IAPEz-int LTR ERVK 8 3076 -3405 3 886 6692 57 12 18 chr15 39548868 39549723 -63945251 + IAPEz-int LTR ERVK 5630 6479 -2 3 886 2190 121 15 6 chr15 39549725 39550059 -63944915 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 886 182 355 65 16 chr15 39550518 39550641 -63944333 - L2a LINE L2 -32 3394 3266 3 886 432 0 0 0 chr15 39550923 39550971 -63944003 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 886 305 206 16 0 chr15 39550977 39551040 -63943934 + (TATG)n Simple_repeat Simple_repeat 3 66 0 4 886 1202 257 10 21 chr15 39551042 39551332 -63943642 - B4A SINE B4 -2 290 4 4 886 261 0 0 0 chr15 39551419 39551448 -63943526 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 886 180 245 0 0 chr15 39551447 39551500 -63943474 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 886 285 179 83 0 chr15 39551506 39551590 -63943384 - Lx9 LINE L1 -135 7509 7419 4 886 885 229 42 60 chr15 39551590 39551874 -63943100 + Lx9 LINE L1 6874 7152 -492 4 886 2965 201 110 88 chr15 39552866 39553799 -63941175 + RMER17B LTR ERVK 1 954 -4 4 886 239 374 69 36 chr15 39554722 39555055 -63939919 + Tigger11a DNA MER2_type 237 580 -155 4 886 488 298 47 55 chr15 39555342 39555728 -63939246 - RLTR17 LTR ERVK -249 443 2 4 886 465 299 63 6 chr15 39555738 39555896 -63939078 - B4A SINE B4 -125 167 1 4 886 357 293 0 0 chr15 39556087 39556169 -63938805 + B1_Mur3 SINE Alu 8 89 -60 5 886 3508 152 29 13 chr15 39556170 39556790 -63938184 - RMER6A LTR ERVK 0 756 127 5 886 517 237 271 0 chr15 39556788 39556965 -63938009 + MTEb LTR MaLR 149 377 -2 5 886 677 169 14 91 chr15 39557048 39557191 -63937783 - RMER6A LTR ERVK -623 133 2 5 886 211 200 80 0 chr15 39557200 39557250 -63937724 + PB1 SINE Alu 72 125 -2 5 886 632 268 74 37 chr15 39557338 39557528 -63937446 + MLT1B LTR MaLR 194 390 0 5 886 344 237 13 0 chr15 39557692 39557768 -63937206 - MTEb LTR MaLR -4 375 299 5 886 295 177 0 0 chr15 39557919 39557998 -63936976 - ORR1A3-int LTR MaLR -1097 866 788 5 886 431 177 25 12 chr15 39557986 39558066 -63936908 - RLTR25B LTR ERVK -431 597 517 5 886 292 255 182 16 chr15 39558009 39558134 -63936840 - ORR1A3-int LTR MaLR -915 594 465 5 886 932 256 0 122 chr15 39558139 39558384 -63936590 - RLTR25A LTR ERVK -881 222 8 5 886 252 0 0 0 chr15 39558635 39558663 -63936311 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 886 306 0 0 0 chr15 39560223 39560257 -63934717 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 886 361 127 0 0 chr15 39560296 39560351 -63934623 - URR1B DNA MER1_type -82 143 89 6 886 3087 164 138 49 chr15 39560489 39560914 -63934060 + RMER17A2 LTR ERVK 1 481 -425 6 886 563 40 14 0 chr15 39560914 39560988 -63933986 + (TC)n Simple_repeat Simple_repeat 2 76 0 6 886 3087 164 138 49 chr15 39560988 39561394 -63933580 + RMER17A2 LTR ERVK 482 906 0 6 886 280 359 49 7 chr15 39563221 39563364 -63931610 - MIRb SINE MIR -53 215 67 6 886 313 337 0 21 chr15 39566179 39566273 -63928701 + MIRm SINE MIR 42 133 -143 6 886 188 255 118 0 chr15 39570681 39570732 -63924242 - MIR SINE MIR -141 121 65 6 886 763 268 35 35 chr15 39571028 39571225 -63923749 + B3A SINE B2 2 198 0 6 886 1008 312 93 55 chr15 39571436 39571553 -63923421 + L1ME1 LINE L1 5352 5489 -690 6 886 1182 43 0 7 chr15 39571553 39571695 -63923279 + B1_Mus2 SINE Alu 2 142 -5 6 886 477 0 0 0 chr15 39571697 39571750 -63923224 + (TAA)n Simple_repeat Simple_repeat 2 54 0 7 886 1008 312 93 55 chr15 39571750 39572166 -63922808 + L1ME1 LINE L1 5490 5914 -265 6 886 1906 119 40 109 chr15 39572166 39572514 -63922460 - ORR1A3 LTR MaLR 0 326 3 7 886 1008 312 93 55 chr15 39572514 39572759 -63922215 + L1ME1 LINE L1 5915 6164 -15 6 886 526 265 54 1 chr15 39572767 39572970 -63922004 + L1MC1 LINE L1 5843 6053 -280 7 886 309 51 0 0 chr15 39572982 39573021 -63921953 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 886 352 275 12 0 chr15 39573216 39573296 -63921678 - ID4_ SINE ID -2 81 1 7 886 1416 44 0 0 chr15 39573320 39573500 -63921474 + (TTC)n Simple_repeat Simple_repeat 1 180 0 7 886 348 176 0 0 chr15 39573500 39573568 -63921406 + CT-rich Low_complexity Low_complexity 3 70 0 7 886 328 262 29 19 chr15 39573615 39573720 -63921254 - PB1D10 SINE Alu -11 106 1 7 886 287 318 45 27 chr15 39573885 39573995 -63920979 - MLT1L LTR MaLR -297 313 202 7 886 234 0 0 0 chr15 39574982 39575008 -63919966 + (CCCCCA)n Simple_repeat Simple_repeat 1 26 0 7 886 818 326 81 13 chr15 39575724 39576032 -63918942 + MLT2D LTR ERVL 1 329 -85 8 886 249 159 0 0 chr15 39576210 39576254 -63918720 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 886 1413 75 0 0 chr15 39576757 39576943 -63918031 - L1_Mus2 LINE L1 0 6566 6381 8 886 260 250 43 21 chr15 39578330 39578424 -63916550 - MIR SINE MIR -77 131 36 8 886 689 0 12 0 chr15 39578969 39579050 -63915924 + (CA)n Simple_repeat Simple_repeat 1 82 0 8 886 370 297 100 42 chr15 39580132 39580322 -63914652 + MLT1A LTR MaLR 158 358 -16 8 886 4418 60 40 28 chr15 39580323 39580903 -63914071 - LTRIS_Mus LTR ERV1 0 587 1 8 886 201 74 0 0 chr15 39583303 39583330 -63911644 + (TG)n Simple_repeat Simple_repeat 1 27 0 8 886 450 0 0 0 chr15 39583330 39583379 -63911595 + (GA)n Simple_repeat Simple_repeat 1 50 0 8 886 254 256 11 99 chr15 39583411 39583502 -63911472 - RSINE1 SINE B4 -36 129 47 8 110 1656 178 109 45 chr15 39583506 39583882 -63911092 - MTD LTR MaLR -8 411 12 9 887 196 30 61 0 chr15 39583882 39583915 -63911059 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 9 887 419 333 102 21 chr15 39584035 39584349 -63910625 + ORR1E LTR MaLR 3 336 -38 9 887 203 56 83 0 chr15 39584368 39584404 -63910570 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 9 887 407 295 33 80 chr15 39584820 39584971 -63910003 + MLT1D LTR MaLR 245 388 -117 9 887 230 293 26 13 chr15 39584971 39585047 -63909927 + MLT1D LTR MaLR 545 621 -3 9 887 866 160 20 14 chr15 39585232 39585378 -63909596 - B1_Mus1 SINE Alu 0 148 2 9 887 468 0 0 0 chr15 39585453 39585505 -63909469 + (TG)n Simple_repeat Simple_repeat 2 53 0 9 887 22 0 0 0 chr15 39585525 39585547 -63909427 + AT_rich Low_complexity Low_complexity 1 22 0 9 887 833 92 137 8 chr15 39585547 39585678 -63909296 - B1_Mus1 SINE Alu 0 148 1 9 887 443 332 78 32 chr15 39586938 39587156 -63907818 - MLT1D LTR MaLR 0 505 278 9 887 271 311 8 25 chr15 39588039 39588161 -63906813 + CT-rich Low_complexity Low_complexity 3 122 0 1 887 648 214 0 0 chr15 39588240 39588572 -63906402 + (TG)n Simple_repeat Simple_repeat 1 332 0 1 887 183 42 0 0 chr15 39589649 39589673 -63905301 + (TTAA)n Simple_repeat Simple_repeat 4 27 0 1 887 194 268 40 53 chr15 39589812 39589887 -63905087 - MIR3 SINE MIR -48 160 87 1 887 321 26 0 0 chr15 39590587 39590625 -63904349 + (TCC)n Simple_repeat Simple_repeat 3 40 0 1 887 385 172 140 0 chr15 39590628 39590721 -63904253 - B1_Mur4 SINE Alu -1 149 44 1 887 987 14 43 0 chr15 39591359 39591500 -63903474 + (TCTA)n Simple_repeat Simple_repeat 2 148 0 1 887 389 311 99 43 chr15 39591507 39591789 -63903185 - LTR37A LTR ERV1 -59 367 70 1 887 1148 246 71 37 chr15 39592176 39592530 -63902444 + ORR1D2 LTR MaLR 2 367 -3 1 887 213 39 0 0 chr15 39593055 39593081 -63901893 + (TTTTC)n Simple_repeat Simple_repeat 2 27 0 1 887 686 269 173 13 chr15 39593236 39593548 -63901426 - L1MC4 LINE L1 -538 7504 7143 1 887 298 273 156 123 chr15 39594010 39594158 -63900816 + LTR55 LTR ERV 1 167 -381 1 887 920 193 119 0 chr15 39594158 39594360 -63900614 - URR1A DNA MER1_type 0 226 1 1 887 298 273 156 123 chr15 39594360 39594570 -63900404 + LTR55 LTR ERV 168 371 -177 1 887 253 261 65 0 chr15 39594768 39594860 -63900114 - L1MD LINE L1 -2542 5453 5356 1 887 314 23 0 23 chr15 39594880 39594924 -63900050 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 887 684 176 80 0 chr15 39594924 39594966 -63900008 - B1_Mur2 SINE Alu -11 138 88 1 887 396 0 0 0 chr15 39594966 39595010 -63899964 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 887 684 176 80 0 chr15 39595010 39595092 -63899882 - B1_Mur2 SINE Alu -62 87 5 1 887 367 298 121 0 chr15 39595093 39595217 -63899757 - B1_Mur1 SINE Alu -9 140 2 1 887 198 0 0 0 chr15 39596775 39596797 -63898177 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1 887 1192 62 7 0 chr15 39596806 39596952 -63898022 - B1_Mus1 SINE Alu -1 147 1 1 887 633 130 0 0 chr15 39596952 39597044 -63897930 - 4.5SRNA scRNA scRNA -2 92 1 1 887 511 309 81 122 chr15 39598258 39598533 -63896441 + B4 SINE B4 10 273 -19 1 887 360 0 0 0 chr15 39598533 39598573 -63896401 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 887 511 333 62 66 chr15 39598573 39598592 -63896382 + B4 SINE B4 274 292 0 1 887 180 0 0 0 chr15 39598594 39598614 -63896360 + (CCA)n Simple_repeat Simple_repeat 1 20 0 1 887 240 328 111 39 chr15 39599145 39599298 -63895676 + MIRc SINE MIR 6 169 -93 1 887 333 309 43 0 chr15 39599477 39599571 -63895403 - MER58B DNA MER1_type -3 338 241 1 887 212 233 0 0 chr15 39600601 39600644 -63894330 - MIR SINE MIR -114 148 106 1 887 439 282 89 0 chr15 39601115 39601239 -63893735 + B1F2 SINE Alu 1 135 -14 1 887 280 357 0 0 chr15 39601239 39601323 -63893651 + (TG)n Simple_repeat Simple_repeat 2 85 0 1 887 265 282 62 46 chr15 39601505 39601635 -63893339 - MER113 DNA MER1_type -4 517 386 1 887 297 0 0 0 chr15 39601814 39601847 -63893127 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 887 244 318 44 33 chr15 39601937 39602028 -63892946 - LTR16C LTR ERVL -239 250 159 1 887 3864 188 93 18 chr15 39603710 39604540 -63890434 + RMER13B LTR ERVK 1 892 -16 1 887 315 349 119 21 chr15 39604881 39605074 -63889900 - MLT1D LTR MaLR -9 496 285 1 887 789 226 48 55 chr15 39605055 39605385 -63889589 + ORR1D2 LTR MaLR 23 370 0 1 887 489 325 57 29 chr15 39606116 39606395 -63888579 + B4A SINE B4 2 288 -4 1 887 1449 192 97 33 chr15 39606633 39606993 -63887981 - ORR1C2 LTR MaLR -1 383 1 1 887 639 156 0 0 chr15 39607432 39607573 -63887401 + GA-rich Low_complexity Low_complexity 2 142 0 1 887 1026 179 97 10 chr15 39607600 39608002 -63886972 + RMER5 LTR ERV1 69 529 -5 1 887 366 260 13 0 chr15 39608108 39608185 -63886789 - ID4 SINE ID 0 83 6 1 887 217 178 22 22 chr15 39608227 39608280 -63886694 - PB1 SINE Alu -47 70 18 1 887 409 317 35 21 chr15 39609013 39609155 -63885819 - MIRc SINE MIR -21 247 104 1 887 328 352 83 6 chr15 39610392 39610572 -63884402 + MIRb SINE MIR 46 239 -29 1 887 207 308 0 0 chr15 39611012 39611064 -63883910 + MIRb SINE MIR 208 259 -9 1 887 1488 123 0 33 chr15 39611281 39611524 -63883450 + MTB_Mm LTR MaLR 18 252 -155 1 887 365 296 113 60 chr15 39612051 39612317 -63882657 - RLTR41 LTR ERV1 0 446 167 1 887 243 0 0 0 chr15 39612600 39612627 -63882347 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 887 239 316 54 76 chr15 39613062 39613247 -63881727 - MER2 DNA MER2_type -5 340 160 1 887 1361 73 0 11 chr15 39613508 39613687 -63881287 + B2_Mm2 SINE B2 1 177 -18 1 887 311 284 0 12 chr15 39615159 39615241 -63879733 + RMER30 DNA MER1_type 10 90 -112 1 887 966 253 20 40 chr15 39616449 39616746 -63878228 + B4A SINE B4 2 292 0 1 887 932 168 11 16 chr15 39617461 39617643 -63877331 - URR1B DNA MER1_type 0 225 45 1 887 260 0 57 0 chr15 39617966 39618001 -63876973 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 1 887 183 309 131 34 chr15 39619024 39619292 -63875682 + L2 LINE L2 2101 2394 -1025 1 887 222 279 59 0 chr15 39620477 39620545 -63874429 + MIRb SINE MIR 121 192 -76 1 887 675 84 0 0 chr15 39621354 39621449 -63873525 + (GGGAGA)n Simple_repeat Simple_repeat 2 96 0 1 887 1095 69 14 0 chr15 39621710 39621855 -63873119 - B1_Mus2 SINE Alu 0 147 1 1 887 28 0 0 0 chr15 39621920 39621948 -63873026 + AT_rich Low_complexity Low_complexity 1 28 0 1 887 643 243 76 12 chr15 39622005 39622176 -63872798 - B3 SINE B2 -8 208 27 1 887 623 304 20 10 chr15 39622174 39622370 -63872604 - B3A SINE B2 0 198 1 1 887 1127 69 19 0 chr15 39622871 39623030 -63871944 + B2_Mm2 SINE B2 2 163 -32 1 887 234 0 0 0 chr15 39623030 39623056 -63871918 + (CAAT)n Simple_repeat Simple_repeat 2 27 0 1 887 3497 33 0 0 chr15 39623891 39624287 -63870687 - MTA_Mm LTR MaLR 0 396 1 1 887 278 278 113 0 chr15 39625591 39625724 -63869250 - L1MA8 LINE L1 -4 6287 6140 1 887 1418 218 50 35 chr15 39626795 39627393 -63867581 + Lx7 LINE L1 7141 7694 -2 1 887 306 214 136 51 chr15 39627411 39627529 -63867445 + Lx9 LINE L1 7512 7639 -5 1 887 229 310 0 0 chr15 39628314 39628385 -63866589 + L1MA5 LINE L1 6208 6278 -22 1 887 348 211 13 0 chr15 39629119 39629195 -63865779 - MTE2b LTR MaLR 0 379 303 1 887 534 284 54 48 chr15 39630139 39630434 -63864540 + L1MA4 LINE L1 5686 5984 -316 1 887 241 310 46 0 chr15 39631504 39631591 -63863383 - MIR SINE MIR -92 170 80 1 887 984 86 0 0 chr15 39633014 39633154 -63861820 + (GAA)n Simple_repeat Simple_repeat 3 142 0 1 887 334 200 31 0 chr15 39633910 39633975 -63860999 - RSINE1 SINE B4 -87 78 12 1 887 824 108 0 8 chr15 39634395 39634526 -63860448 + (TTC)n Simple_repeat Simple_repeat 3 132 0 1 887 249 65 0 0 chr15 39634526 39634557 -63860417 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 887 254 289 0 0 chr15 39634557 39634633 -63860341 - B1F SINE Alu -1 148 73 1 887 489 320 5 73 chr15 39634777 39634969 -63860005 + MER58A DNA MER1_type 7 185 -39 1 887 214 250 0 40 chr15 39635118 39635193 -63859781 + GA-rich Low_complexity Low_complexity 3 74 0 1 887 432 307 116 21 chr15 39636704 39636937 -63858037 + RMER15 LTR ERVL 274 528 -47 1 887 371 287 182 12 chr15 39636989 39637236 -63857738 + MLT2F LTR ERVL 249 537 -126 1 887 357 82 0 0 chr15 39637302 39637351 -63857623 + (CAGA)n Simple_repeat Simple_repeat 4 52 0 1 887 246 238 16 0 chr15 39638350 39638413 -63856561 + GA-rich Low_complexity Low_complexity 1 64 0 1 887 243 278 92 10 chr15 39638493 39638591 -63856383 - L2a LINE L2 -19 3407 3302 1 887 1661 162 70 47 chr15 39640299 39640700 -63854274 + RMER17C LTR ERVK 1 410 0 1 887 1066 251 111 41 chr15 39640859 39641203 -63853771 + ORR1D2 LTR MaLR 1 368 -2 1 887 22 0 0 0 chr15 39643069 39643091 -63851883 + AT_rich Low_complexity Low_complexity 1 22 0 1 887 243 317 0 12 chr15 39643124 39643207 -63851767 - ID4 SINE ID 0 83 2 1 887 583 264 52 93 chr15 39643601 39643969 -63851005 + ORR1E LTR MaLR 6 377 -2 1 887 319 293 54 48 chr15 39644389 39644536 -63850438 - MER5A1 DNA MER1_type 0 166 19 1 887 256 136 0 48 chr15 39644547 39644609 -63850365 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 1 887 303 28 0 0 chr15 39645142 39645178 -63849796 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 887 190 207 138 0 chr15 39645228 39645286 -63849688 - L2a LINE L2 -1 3425 3360 1 887 200 368 25 25 chr15 39646321 39646441 -63848533 - MER91B DNA Tip100 -36 154 35 1 887 896 113 34 6 chr15 39646681 39647006 -63847968 + (TG)n Simple_repeat Simple_repeat 1 334 0 1 887 714 137 33 0 chr15 39647030 39647247 -63847727 + (TG)n Simple_repeat Simple_repeat 1 224 0 1 887 1163 48 7 0 chr15 39649285 39649431 -63845543 - B1_Mm SINE Alu 0 147 1 1 887 3722 52 2 11 chr15 39649445 39649909 -63845065 - L1_Mus1 LINE L1 0 6567 6108 1 887 934 67 19 32 chr15 39650257 39650411 -63844563 + L1Md_F2 LINE L1 6431 6582 0 1 887 827 318 100 16 chr15 39650629 39651197 -63843777 + L1MC3 LINE L1 7119 7734 -51 1 887 455 316 8 0 chr15 39652024 39652141 -63842833 - ID_B1 SINE B4 -33 191 74 1 887 240 213 12 62 chr15 39653121 39653201 -63841773 + Lx7 LINE L1 7292 7367 -329 1 887 210 231 0 0 chr15 39653202 39653267 -63841707 + CT-rich Low_complexity Low_complexity 1 65 0 1 887 210 232 29 14 chr15 39653281 39653351 -63841623 + (TATATG)n Simple_repeat Simple_repeat 6 76 0 1 887 219 243 0 14 chr15 39653326 39653397 -63841577 + (TTTG)n Simple_repeat Simple_repeat 1 70 0 2 887 324 0 0 0 chr15 39653398 39653434 -63841540 + (T)n Simple_repeat Simple_repeat 1 36 0 2 887 1215 54 0 0 chr15 39653434 39653581 -63841393 - B1_Mus2 SINE Alu 0 147 1 2 887 736 215 52 72 chr15 39653581 39653832 -63841142 + Lx7 LINE L1 7451 7696 0 1 887 1239 35 0 0 chr15 39655968 39656113 -63838861 + B1_Mus1 SINE Alu 1 145 -3 2 887 23 0 0 0 chr15 39656527 39656550 -63838424 + AT_rich Low_complexity Low_complexity 1 23 0 2 887 567 67 47 19 chr15 39656749 39656856 -63838118 - Lx3_Mus LINE L1 -8 7001 6892 2 887 1886 160 63 6 chr15 39657382 39657746 -63837228 + MTC LTR MaLR 23 407 -14 2 887 324 0 0 0 chr15 39658283 39658319 -63836655 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 887 1122 131 0 3 chr15 39660567 39660927 -63834047 + (GA)n Simple_repeat Simple_repeat 1 359 0 2 887 182 171 0 24 chr15 39660928 39660947 -63834027 + polypurine Low_complexity Low_complexity 4 22 0 2 887 1128 111 0 0 chr15 39660947 39661127 -63833847 + (GA)n Simple_repeat Simple_repeat 1 180 0 2 887 182 171 0 24 chr15 39661127 39661149 -63833825 + polypurine Low_complexity Low_complexity 23 44 0 2 887 1203 55 0 0 chr15 39662077 39662222 -63832752 + B1_Mm SINE Alu 1 145 -2 2 887 423 0 0 0 chr15 39662222 39662269 -63832705 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2 887 1452 190 110 9 chr15 39663596 39663931 -63831043 - ORR1D1 LTR MaLR -5 369 1 2 887 468 286 35 6 chr15 39663969 39664138 -63830836 + MLT1B LTR MaLR 85 258 -132 2 887 245 390 24 16 chr15 39664291 39664416 -63830558 + MLT1B LTR MaLR 257 382 -8 2 887 1868 193 56 0 chr15 39665160 39665533 -63829441 - ORR1B1 LTR MaLR 0 394 1 2 887 291 179 0 0 chr15 39665834 39665890 -63829084 + PB1D10 SINE Alu 22 77 -40 2 887 1521 121 42 4 chr15 39665890 39666130 -63828844 + Lx3B LINE L1 6719 6967 -6 2 887 429 141 0 0 chr15 39666130 39666201 -63828773 + (TAA)n Simple_repeat Simple_repeat 1 71 0 2 887 1170 84 81 85 chr15 39666511 39666757 -63828217 + ORR1B2-int LTR MaLR 1161 1405 -104 2 887 1287 174 138 7 chr15 39666792 39667088 -63827886 + ORR1B2 LTR MaLR 1 335 -32 2 887 1978 114 12 51 chr15 39667173 39667507 -63827467 + RLTRETN_Mm LTR ERVK 2 322 0 2 887 386 326 48 41 chr15 39668137 39668284 -63826690 + RSINE1 SINE B4 16 163 -2 2 887 226 120 59 20 chr15 39668380 39668431 -63826543 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 887 607 298 41 63 chr15 39668437 39668706 -63826268 - B4A SINE B4 -1 291 29 2 887 966 156 196 0 chr15 39668838 39669017 -63825957 + B3 SINE B2 2 215 -1 2 887 986 65 220 25 chr15 39669844 39670003 -63824971 - B2_Mm2 SINE B2 -5 190 1 2 887 246 293 49 0 chr15 39670526 39670608 -63824366 - MER5A1 DNA MER1_type -13 153 68 2 887 240 344 21 0 chr15 39671160 39671253 -63823721 + L1MC4a LINE L1 5555 5649 -2233 2 887 487 262 89 83 chr15 39671255 39671580 -63823394 + MLT1D LTR MaLR 1 327 -178 2 887 234 311 61 1 chr15 39671589 39671681 -63823293 + MLT1D LTR MaLR 412 497 -8 2 887 274 301 127 28 chr15 39671695 39671907 -63823067 + L1MC4a LINE L1 5665 5897 -1985 2 887 557 27 27 0 chr15 39671919 39671993 -63822981 + (TTTTG)n Simple_repeat Simple_repeat 2 77 0 2 887 922 273 33 26 chr15 39673862 39674133 -63820841 + B4 SINE B4 1 273 -19 2 887 907 168 17 103 chr15 39674902 39675134 -63819840 + B3 SINE B2 5 216 0 2 887 627 174 78 0 chr15 39675978 39676093 -63818881 + B1_Mur4 SINE Alu 24 147 -3 2 887 233 263 126 0 chr15 39676112 39676207 -63818767 + PB1D10 SINE Alu 1 107 -10 2 887 1396 251 96 10 chr15 39676213 39676600 -63818374 + Lx6 LINE L1 7040 7459 -1 2 887 307 321 68 8 chr15 39676656 39676788 -63818186 + MLT1C LTR MaLR 73 212 -255 2 887 272 241 119 12 chr15 39676864 39676948 -63818026 + MLT1C LTR MaLR 328 420 -47 2 887 346 176 12 12 chr15 39677091 39677177 -63817797 + GA-rich Low_complexity Low_complexity 1 86 0 2 887 1970 136 42 30 chr15 39678567 39678968 -63816006 + MT2B LTR ERVL 1 595 -6 2 887 441 273 0 0 chr15 39678973 39679083 -63815891 + PB1D7 SINE Alu 5 114 -6 2 887 730 265 58 12 chr15 39679505 39679759 -63815215 + L1MA6 LINE L1 6020 6296 -4 2 887 424 316 100 34 chr15 39680931 39681170 -63813804 - MER2 DNA MER2_type 0 345 91 2 887 540 304 107 32 chr15 39681172 39681822 -63813152 + L1MB8 LINE L1 5443 6177 -1 2 887 731 158 316 0 chr15 39681921 39682092 -63812882 - URR1B DNA MER1_type 0 225 1 2 887 453 62 0 0 chr15 39682251 39682316 -63812658 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 2 887 498 264 160 51 chr15 39682370 39682701 -63812273 + RLTR9A LTR ERVK 2 368 0 2 887 205 29 29 29 chr15 39682806 39682841 -63812133 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 2 887 201 74 0 0 chr15 39683237 39683264 -63811710 + (A)n Simple_repeat Simple_repeat 1 27 0 2 887 504 0 0 0 chr15 39683585 39683641 -63811333 + (GA)n Simple_repeat Simple_repeat 2 57 0 2 887 21 57 0 0 chr15 39684140 39684175 -63810799 + AT_rich Low_complexity Low_complexity 1 35 0 2 887 191 36 0 35 chr15 39684784 39684813 -63810161 + (TTAA)n Simple_repeat Simple_repeat 2 29 0 2 887 191 227 15 0 chr15 39685117 39685183 -63809791 + A-rich Low_complexity Low_complexity 2 68 0 2 887 243 231 0 0 chr15 39689538 39689590 -63805384 + MTEa LTR MaLR 3 54 -325 2 887 399 202 0 0 chr15 39690409 39690523 -63804451 + CT-rich Low_complexity Low_complexity 1 114 0 2 887 457 247 126 26 chr15 39690833 39691087 -63803887 + ORR1E LTR MaLR 6 355 -4 2 887 644 226 118 36 chr15 39691135 39691355 -63803619 + MLT1A1 LTR MaLR 169 406 -2 2 887 249 227 104 26 chr15 39691924 39692001 -63802973 + ID_B1 SINE B4 142 224 0 2 887 194 0 0 37 chr15 39692016 39692043 -63802931 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 2 887 233 57 0 0 chr15 39692043 39692078 -63802896 + U2 snRNA snRNA 2 36 -152 2 887 549 0 0 0 chr15 39692081 39692142 -63802832 + (GGGAA)n Simple_repeat Simple_repeat 4 64 0 2 887 36 0 0 0 chr15 39692426 39692462 -63802512 + AT_rich Low_complexity Low_complexity 1 36 0 2 887 32 34 0 33 chr15 39693689 39693710 -63801264 + AT_rich Low_complexity Low_complexity 1 20 0 2 887 203 23 67 22 chr15 39693710 39693755 -63801219 + (TATAA)n Simple_repeat Simple_repeat 4 50 0 2 887 32 34 0 33 chr15 39693755 39693794 -63801180 + AT_rich Low_complexity Low_complexity 1 39 0 2 887 206 121 16 65 chr15 39693794 39693856 -63801118 + A-rich Low_complexity Low_complexity 2 60 0 2 887 369 0 0 0 chr15 39694120 39694161 -63800813 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 887 225 359 163 50 chr15 39694189 39694391 -63800583 - MER115 DNA Tip100 -431 262 38 2 887 342 319 190 26 chr15 39694628 39694860 -63800114 + B4A SINE B4 9 278 -14 2 887 651 112 0 0 chr15 39694916 39695014 -63799960 + (GA)n Simple_repeat Simple_repeat 1 98 0 2 887 1015 139 0 11 chr15 39695020 39695202 -63799772 + (GGA)n Simple_repeat Simple_repeat 1 180 0 2 887 450 191 0 35 chr15 39695202 39695224 -63799750 + polypurine Low_complexity Low_complexity 1 21 0 2 887 1149 123 0 0 chr15 39695224 39695403 -63799571 + (GGA)n Simple_repeat Simple_repeat 2 180 0 2 887 450 191 0 35 chr15 39695403 39695457 -63799517 + polypurine Low_complexity Low_complexity 22 75 0 2 887 1125 128 0 0 chr15 39695457 39695637 -63799337 + (GGA)n Simple_repeat Simple_repeat 1 180 0 2 887 255 276 76 17 chr15 39695950 39696068 -63798906 - L1MB8 LINE L1 -12 6166 6042 2 887 365 342 28 0 chr15 39696197 39696407 -63798567 + MER67D LTR ERV1 163 358 -156 2 887 609 247 132 21 chr15 39696624 39696905 -63798069 - L1MB8 LINE L1 -421 5757 5446 2 887 417 188 71 32 chr15 39697107 39697233 -63797741 + L1_Rod LINE L1 3816 3977 -2166 2 887 474 18 0 0 chr15 39697418 39697473 -63797501 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 887 1483 228 57 47 chr15 39697531 39698061 -63796913 - RLTR20B3 LTR ERVK -34 543 9 2 887 564 0 135 0 chr15 39698543 39698699 -63796275 + (CAGC)n Simple_repeat Simple_repeat 4 180 0 2 887 712 192 13 27 chr15 39699165 39699315 -63795659 - B2_Mm2 SINE B2 -28 167 20 2 887 28 29 0 0 chr15 39700488 39700523 -63794451 + AT_rich Low_complexity Low_complexity 1 35 0 2 887 615 27 0 0 chr15 39701767 39701840 -63793134 + (CAAG)n Simple_repeat Simple_repeat 2 74 0 2 887 25 0 0 0 chr15 39702154 39702179 -63792795 + AT_rich Low_complexity Low_complexity 1 25 0 2 887 531 184 26 78 chr15 39705080 39705233 -63789741 + RSINE1 SINE B4 2 146 -19 2 887 294 351 22 30 chr15 39706522 39706657 -63788317 + MER77 LTR ERVL 451 584 -23 2 887 362 270 210 54 chr15 39709045 39709297 -63785677 - B4 SINE B4 0 292 1 2 887 1137 88 0 0 chr15 39710568 39710716 -63784258 + B1_Mus1 SINE Alu 1 148 0 2 887 183 100 0 0 chr15 39710736 39710766 -63784208 + (A)n Simple_repeat Simple_repeat 1 30 0 2 887 6037 30 0 1 chr15 39713015 39713711 -63781263 - L1Md_F2 LINE L1 0 6582 5888 2 887 434 314 26 42 chr15 39714613 39714806 -63780168 - B3 SINE B2 -13 203 14 2 888 581 279 65 22 chr15 39715798 39716029 -63778945 + B4A SINE B4 3 243 -49 2 888 1113 216 130 30 chr15 39717200 39717539 -63777435 + ORR1D1 LTR MaLR 2 374 0 2 888 239 114 0 22 chr15 39717731 39717776 -63777198 + (GAAA)n Simple_repeat Simple_repeat 1 44 0 2 888 239 348 16 33 chr15 39717824 39717946 -63777028 + Tigger15a DNA TcMar 174 293 -422 2 888 311 307 25 50 chr15 39718608 39718728 -63776246 + ID_B1 SINE B4 53 169 -55 2 888 378 0 0 0 chr15 39720020 39720062 -63774912 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 888 580 145 421 0 chr15 39721087 39721232 -63773742 - B3 SINE B2 -9 207 2 2 888 400 343 137 27 chr15 39721534 39721944 -63773030 + Tigger9a DNA Tigger 214 668 -64 2 888 288 0 0 0 chr15 39721966 39721998 -63772976 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 888 231 271 0 17 chr15 39721998 39722058 -63772916 + (CATG)n Simple_repeat Simple_repeat 3 61 0 3 888 279 283 61 13 chr15 39722340 39722436 -63772538 + PB1D7 SINE Alu 12 112 -37 3 888 671 273 99 38 chr15 39723839 39724052 -63770922 + B4 SINE B4 1 226 -66 3 888 844 254 111 10 chr15 39724083 39724389 -63770585 + Lx8 LINE L1 6943 7279 -194 3 888 21 0 0 0 chr15 39724509 39724530 -63770444 + AT_rich Low_complexity Low_complexity 1 21 0 3 888 30 0 0 0 chr15 39728029 39728059 -63766915 + AT_rich Low_complexity Low_complexity 1 30 0 3 888 2823 219 123 30 chr15 39728158 39728889 -63766085 + RLTR40 LTR ERVK 8 806 -11 3 888 35 71 0 0 chr15 39729223 39729293 -63765681 + AT_rich Low_complexity Low_complexity 1 70 0 3 888 1252 223 122 18 chr15 39729951 39730294 -63764680 + MTE2b LTR MaLR 1 379 0 3 888 517 266 88 31 chr15 39731127 39731421 -63763553 + MLT1B LTR MaLR 1 323 -51 3 888 926 273 120 24 chr15 39731723 39732263 -63762711 + Charlie1a DNA MER1_type 785 1376 -79 3 888 395 245 78 48 chr15 39732281 39732384 -63762590 + PB1D10 SINE Alu 5 110 -7 3 888 205 138 0 0 chr15 39732532 39732561 -63762413 + (CAG)n Simple_repeat Simple_repeat 1 29 0 3 888 230 256 0 109 chr15 39732564 39732656 -63762318 + ID4_ SINE ID 2 83 0 3 888 2719 147 79 96 chr15 39733861 39734446 -63760528 + RMER15 LTR ERVL 1 575 0 3 888 315 262 91 37 chr15 39734624 39734775 -63760199 + MLT1C LTR MaLR 243 462 -5 3 888 228 333 15 0 chr15 39736641 39736707 -63758267 - ID4 SINE ID -10 73 7 3 888 23 33 0 0 chr15 39738049 39738079 -63756895 + AT_rich Low_complexity Low_complexity 1 30 0 3 888 336 143 0 0 chr15 39738165 39738221 -63756753 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 888 363 235 37 0 chr15 39739287 39739368 -63755606 + RSINE1 SINE B4 57 140 -25 3 888 551 260 33 44 chr15 39739990 39740171 -63754803 + MER3 DNA MER1_type 13 191 -18 3 888 365 264 11 0 chr15 39740183 39740270 -63754704 + L1MC5 LINE L1 7331 7418 -543 3 888 3124 166 19 3 chr15 39740508 39741083 -63753891 + L1_Mur3 LINE L1 2221 2804 -3076 3 888 506 286 23 51 chr15 39741103 39741320 -63753654 + RLTR15 LTR ERVK 14 224 -135 3 888 9826 136 140 10 chr15 39741320 39741596 -63753378 + Lx7 LINE L1 3699 3985 -1895 3 888 306 0 0 0 chr15 39741596 39741630 -63753344 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 888 9826 136 140 10 chr15 39741630 39743014 -63751960 + Lx7 LINE L1 3986 5601 -279 3 888 2358 172 13 13 chr15 39743014 39743408 -63751566 + ORR1B1 LTR MaLR 1 394 0 3 888 9826 171 93 17 chr15 39743408 39744108 -63750866 + Lx7 LINE L1 5602 6337 -1359 3 888 1041 210 414 3 chr15 39744115 39744499 -63750475 - Lx9 LINE L1 -687 6957 6407 3 888 186 43 0 0 chr15 39744499 39744522 -63750452 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 888 487 230 123 22 chr15 39744522 39744606 -63750368 - Lx9 LINE L1 -1238 6406 6323 3 888 345 340 112 12 chr15 39745091 39745252 -63749722 + MLT1B LTR MaLR 244 467 0 3 888 770 204 216 0 chr15 39745365 39745527 -63749447 + B3 SINE B2 1 197 -19 3 888 628 276 30 35 chr15 39745809 39745993 -63748981 + B3A SINE B2 1 184 -14 3 888 369 43 0 0 chr15 39745993 39746040 -63748934 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 888 628 276 30 35 chr15 39746040 39746054 -63748920 + B3A SINE B2 185 198 0 3 888 4309 35 6 6 chr15 39746358 39746848 -63748126 + L1Md_F3 LINE L1 6080 6569 -15 3 888 404 311 87 26 chr15 39746892 39747123 -63747851 - L1MB7 LINE L1 -9 6175 5931 3 888 515 240 67 20 chr15 39747289 39747438 -63747536 - B4A SINE B4 -136 156 1 3 888 247 162 156 39 chr15 39747438 39747515 -63747459 - L1M4 LINE L1 -685 5489 5404 3 888 309 51 0 0 chr15 39747515 39747554 -63747420 + (CAGT)n Simple_repeat Simple_repeat 4 42 0 3 888 351 196 212 12 chr15 39747877 39748037 -63746937 - MIR SINE MIR -7 255 64 3 888 1249 75 0 0 chr15 39748176 39748323 -63746651 + B1_Mus2 SINE Alu 1 147 0 3 888 199 0 65 0 chr15 39748323 39748354 -63746620 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 3 888 353 273 69 133 chr15 39749253 39749426 -63745548 + MTEa LTR MaLR 204 365 -14 3 888 342 0 0 0 chr15 39749434 39749472 -63745502 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 888 375 359 8 0 chr15 39749472 39749600 -63745374 + MTEa-int LTR MaLR 8 136 -1444 3 888 1837 282 84 40 chr15 39749625 39750837 -63744137 + MTEa-int LTR MaLR 200 1513 -67 3 888 381 298 132 46 chr15 39750863 39751060 -63743914 + ORR1E LTR MaLR 24 237 -122 3 888 1855 91 189 90 chr15 39751491 39751630 -63743344 - RLTR11B LTR ERVK 0 453 347 3 888 834 135 0 45 chr15 39751630 39751785 -63743189 - L1Md_F3 LINE L1 0 6584 6437 3 888 1855 91 189 90 chr15 39751785 39752004 -63742970 - RLTR11B LTR ERVK -107 346 101 3 888 291 28 0 0 chr15 39752004 39752040 -63742934 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 888 1855 91 189 90 chr15 39752040 39752092 -63742882 - RLTR11B LTR ERVK -353 100 3 3 888 310 264 177 0 chr15 39752243 39752401 -63742573 - Lx8 LINE L1 -1584 5889 5669 3 888 1478 202 35 70 chr15 39752443 39752815 -63742159 + RLTR20C LTR ERVK 6 364 -170 3 888 783 302 98 29 chr15 39752859 39753624 -63741350 - Lx8 LINE L1 -325 5555 4702 3 888 1979 44 0 31 chr15 39754753 39755011 -63739963 + L1_Mus2 LINE L1 6317 6566 0 3 888 392 364 7 0 chr15 39755416 39755556 -63739418 + RSINE1 SINE B4 4 144 -21 3 888 528 299 73 15 chr15 39755799 39755935 -63739039 - B4 SINE B4 -148 144 1 3 888 209 222 0 0 chr15 39756879 39756924 -63738050 + A-rich Low_complexity Low_complexity 1 45 0 3 888 456 228 129 14 chr15 39757071 39757218 -63737756 - MER58A DNA MER1_type 0 224 61 3 888 378 303 45 15 chr15 39757504 39757702 -63737272 - L1MC5 LINE L1 -1102 6859 6656 3 888 21 0 0 0 chr15 39757872 39757893 -63737081 + AT_rich Low_complexity Low_complexity 1 21 0 3 888 1169 265 118 25 chr15 39758769 39759175 -63735799 - Lx8 LINE L1 -870 6603 6160 3 888 235 121 17 17 chr15 39759200 39759259 -63735715 + A-rich Low_complexity Low_complexity 2 60 0 3 888 189 333 20 0 chr15 39759281 39759332 -63735642 + MIR SINE MIR 24 75 -187 3 888 247 257 27 0 chr15 39759338 39759412 -63735562 + L1MB7 LINE L1 4675 4750 -1396 3 888 837 236 172 49 chr15 39759689 39760014 -63734960 + MTE2b LTR MaLR 15 379 0 3 888 457 297 85 35 chr15 39760023 39760365 -63734609 + L1MB7 LINE L1 4826 5184 -962 3 888 280 289 175 0 chr15 39760582 39760748 -63734226 + L1MC LINE L1 5445 5639 -2146 3 888 894 275 87 15 chr15 39760765 39761157 -63733817 + L1MB7 LINE L1 5718 6137 -47 3 888 357 286 114 0 chr15 39761207 39761312 -63733662 + B1F SINE Alu 1 117 -32 3 888 316 258 225 0 chr15 39761402 39761491 -63733483 + PB1D9 SINE Alu 2 110 -10 3 888 766 258 43 126 chr15 39761726 39762028 -63732946 - B4A SINE B4 -8 284 8 3 888 444 296 157 24 chr15 39762036 39762737 -63732237 + L1MD LINE L1 4380 5198 -948 3 888 8121 73 9 3 chr15 39762885 39764642 -63730332 + L1_Mus2 LINE L1 4802 6566 0 3 888 366 293 90 36 chr15 39764655 39764956 -63730018 + L1MD LINE L1 5385 5701 -541 3 888 233 231 5 38 chr15 39764974 39765063 -63729911 + L1M5 LINE L1 5777 5859 -303 3 888 369 242 64 6 chr15 39765700 39765817 -63729157 - B1F2 SINE Alu -11 138 9 3 888 304 261 33 33 chr15 39765731 39765822 -63729152 - B4A SINE B4 -113 179 89 3 888 23 0 0 0 chr15 39765834 39765857 -63729117 + AT_rich Low_complexity Low_complexity 1 23 0 3 888 319 226 181 51 chr15 39765931 39766108 -63728866 + L1MA5 LINE L1 6093 6292 -8 3 888 226 314 126 8 chr15 39767310 39767429 -63727545 - L1M5 LINE L1 -476 5697 5565 3 888 232 248 116 69 chr15 39767457 39767630 -63727344 + Charlie5 DNA MER1_type 2368 2548 -76 3 888 216 200 0 0 chr15 39767646 39767696 -63727278 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 888 498 279 44 26 chr15 39767961 39768075 -63726899 - RSINE1 SINE B4 -2 163 48 3 888 26 0 0 0 chr15 39768229 39768255 -63726719 + AT_rich Low_complexity Low_complexity 1 26 0 3 888 180 188 0 0 chr15 39769949 39769981 -63724993 + L2a LINE L2 3302 3333 -93 3 888 192 311 147 32 chr15 39770059 39770215 -63724759 + MIRb SINE MIR 72 245 -23 3 888 351 150 0 0 chr15 39770303 39770363 -63724611 + (TATG)n Simple_repeat Simple_repeat 1 60 0 3 888 386 226 144 20 chr15 39770754 39770852 -63724122 + B1F SINE Alu 3 115 -12 3 888 235 121 17 17 chr15 39772184 39772243 -63722731 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 3 888 415 348 12 30 chr15 39772373 39772539 -63722435 - RSINE1 SINE B4 0 165 3 3 888 543 275 115 45 chr15 39772560 39772716 -63722258 - B4 SINE B4 -1 291 125 3 888 195 42 0 0 chr15 39772799 39772823 -63722151 + (TATG)n Simple_repeat Simple_repeat 4 27 0 3 888 893 42 0 78 chr15 39773924 39774053 -63720921 - B1_Mus1 SINE Alu -8 140 22 3 888 30 69 0 0 chr15 39775321 39775379 -63719595 + GC_rich Low_complexity Low_complexity 1 58 0 3 888 23 0 0 0 chr15 39776113 39776136 -63718838 + GC_rich Low_complexity Low_complexity 1 23 0 3 888 277 251 137 0 chr15 39776328 39776429 -63718545 - MIRb SINE MIR -52 216 93 3 888 190 0 32 32 chr15 39776801 39776832 -63718142 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 888 577 250 14 0 chr15 39777209 39777349 -63717625 - Charlie1a DNA MER1_type -246 1209 1068 3 888 1135 88 0 0 chr15 39777370 39777506 -63717468 + B1_Mus1 SINE Alu 4 139 -9 3 888 312 18 53 35 chr15 39777568 39777625 -63717349 + (CAAAA)n Simple_repeat Simple_repeat 2 59 0 3 888 26 0 0 0 chr15 39777722 39777748 -63717226 + AT_rich Low_complexity Low_complexity 1 26 0 3 888 1225 49 0 0 chr15 39777841 39777984 -63716990 + B1_Mus2 SINE Alu 5 147 0 3 888 180 152 0 0 chr15 39779865 39779898 -63715076 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 888 367 291 97 0 chr15 39779917 39780051 -63714923 - MIR SINE MIR -71 191 45 3 888 232 214 0 35 chr15 39781466 39781524 -63713450 + L2a LINE L2 3305 3360 -66 3 888 2625 51 3 0 chr15 39781524 39781836 -63713138 - L1Md_T LINE L1 -1 6581 6269 3 888 333 154 11 21 chr15 39782723 39782816 -63712158 + (TG)n Simple_repeat Simple_repeat 1 92 0 3 888 209 317 0 37 chr15 39782829 39782937 -63712037 + A-rich Low_complexity Low_complexity 3 106 0 4 888 21 0 0 0 chr15 39783017 39783038 -63711936 + AT_rich Low_complexity Low_complexity 1 21 0 4 888 332 185 119 36 chr15 39785259 39785343 -63709631 - MIR3 SINE MIR -3 205 115 4 888 210 91 0 0 chr15 39785867 39785900 -63709074 + (T)n Simple_repeat Simple_repeat 1 33 0 4 888 1305 48 0 0 chr15 39785900 39786047 -63708927 - B1_Mm SINE Alu 0 147 1 4 888 754 285 141 21 chr15 39786234 39786473 -63708501 - MLT1A0 LTR MaLR 0 365 98 4 888 1180 254 123 6 chr15 39786473 39786805 -63708169 - MTE2b LTR MaLR -4 375 5 4 888 754 285 141 21 chr15 39786805 39786891 -63708083 - MLT1A0 LTR MaLR -268 97 2 4 888 204 125 0 0 chr15 39787331 39787363 -63707611 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 888 457 278 139 62 chr15 39787385 39787660 -63707314 + MLT2C2 LTR ERVL 99 445 -19 4 888 346 98 82 20 chr15 39787660 39787806 -63707168 + (TCTA)n Simple_repeat Simple_repeat 2 156 0 4 888 231 114 0 0 chr15 39788619 39788663 -63706311 + (CAGA)n Simple_repeat Simple_repeat 4 47 0 4 888 299 291 65 29 chr15 39788663 39788704 -63706270 - MLT2D LTR ERVL -20 539 503 4 888 564 56 0 0 chr15 39788704 39788776 -63706198 + (GGGGA)n Simple_repeat Simple_repeat 4 75 0 4 888 362 291 45 18 chr15 39788776 39788889 -63706085 - MLT2D LTR ERVL -57 502 383 4 888 1217 264 56 0 chr15 39788947 39789235 -63705739 - MLT2D LTR ERVL -108 306 3 4 888 735 318 58 53 chr15 39789505 39789847 -63705127 + MER2 DNA MER2_type 2 345 0 4 888 450 36 0 0 chr15 39790000 39790056 -63704918 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 888 221 219 0 0 chr15 39790135 39790176 -63704798 - B4 SINE B4 -210 82 42 4 888 188 363 21 32 chr15 39790925 39791019 -63703955 - MIRb SINE MIR -124 144 52 4 888 2169 147 15 72 chr15 39792468 39792857 -63702117 + ORR1B2 LTR MaLR 1 367 0 4 888 757 263 77 43 chr15 39792916 39793123 -63701851 - B3 SINE B2 0 216 3 4 888 186 399 101 5 chr15 39794710 39794899 -63700075 - L2 LINE L2 -1046 2373 2167 4 888 239 160 52 67 chr15 39795154 39795347 -63699627 + (TTATA)n Simple_repeat Simple_repeat 1 190 0 4 888 238 310 193 21 chr15 39795356 39795501 -63699473 - MER2B DNA MER2_type 0 336 167 4 888 238 323 0 31 chr15 39796226 39796322 -63698652 + CT-rich Low_complexity Low_complexity 1 93 0 4 888 371 300 99 14 chr15 39796322 39796464 -63698510 - HAL1-3A_ME LINE L1 -421 2437 2284 4 888 392 184 0 10 chr15 39796473 39796577 -63698397 + CT-rich Low_complexity Low_complexity 4 106 0 4 888 243 281 56 169 chr15 39796599 39796865 -63698109 - L2b LINE L2 -18 3369 3134 4 888 624 172 20 0 chr15 39797346 39797445 -63697529 + B1_Mus2 SINE Alu 6 106 -41 4 888 521 184 61 0 chr15 39797528 39797626 -63697348 + ORR1D1 LTR MaLR 169 272 -102 4 888 3799 199 147 18 chr15 39797638 39798581 -63696393 + RMER1B Other Other 2 1066 0 4 888 466 236 27 0 chr15 39798582 39798692 -63696282 + ORR1D1 LTR MaLR 262 374 0 4 888 215 345 171 21 chr15 39798772 39799251 -63695723 - L2b LINE L2 -913 2506 1956 4 888 198 359 13 0 chr15 39800290 39800368 -63694606 - L2b LINE L2 -1400 2019 1941 4 888 1630 312 53 20 chr15 39800605 39801191 -63693783 - MLT1D-int LTR MaLR -971 609 5 4 888 1142 57 28 21 chr15 39801192 39801336 -63693638 - B1_Mus2 SINE Alu -1 146 2 4 888 396 296 56 123 chr15 39801353 39801880 -63693094 - MLT1D LTR MaLR 0 379 5 4 888 201 121 0 0 chr15 39802618 39802651 -63692323 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 888 204 291 0 81 chr15 39803682 39803768 -63691206 - L2c LINE L2 -19 3368 3290 4 888 504 0 0 0 chr15 39804194 39804250 -63690724 + (GA)n Simple_repeat Simple_repeat 1 56 0 4 888 266 328 31 39 chr15 39804362 39804492 -63690482 - MIRb SINE MIR -20 248 120 4 888 737 220 7 0 chr15 39805052 39805193 -63689781 - ORR1E LTR MaLR -217 142 1 4 888 334 348 70 0 chr15 39806029 39806187 -63688787 - MamRep564 Unknown Unknown -83 274 106 4 888 221 261 0 0 chr15 39807190 39807236 -63687738 - L2c LINE L2 -3 3384 3339 4 888 592 265 166 0 chr15 39808065 39808276 -63686698 + MER2 DNA MER2_type 2 247 -98 4 888 1071 234 106 10 chr15 39810349 39810511 -63684463 - ORR1D1 LTR MaLR -8 362 169 4 888 777 110 0 0 chr15 39810511 39810629 -63684345 + (GA)n Simple_repeat Simple_repeat 1 118 0 4 888 1071 209 59 4 chr15 39810629 39810785 -63684189 - ORR1D1 LTR MaLR -204 170 2 4 888 30 0 0 0 chr15 39811550 39811580 -63683394 + AT_rich Low_complexity Low_complexity 1 30 0 4 888 322 327 9 0 chr15 39812217 39812324 -63682650 - MER5B DNA MER1_type -70 108 1 4 888 247 254 0 33 chr15 39812685 39812746 -63682228 + polypyrimidine Low_complexity Low_complexity 1 59 0 4 888 231 36 0 0 chr15 39813021 39813049 -63681925 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 4 888 862 127 119 12 chr15 39813065 39813233 -63681741 - Lx4A LINE L1 0 7058 6873 4 888 183 111 37 0 chr15 39813306 39813333 -63681641 + L2a LINE L2 3365 3392 -34 4 888 3615 23 8 0 chr15 39813538 39813931 -63681043 + MTA_Mm LTR MaLR 1 396 0 4 888 281 292 57 21 chr15 39814379 39814519 -63680455 + L2a LINE L2 1662 1806 -1613 4 888 38787 30 0 0 chr15 39814524 39821006 -63673968 - L1Md_T LINE L1 0 6585 7 4 888 1080 161 77 18 chr15 39821274 39821495 -63673479 + Lx4B LINE L1 6822 7055 -3 4 888 297 0 0 0 chr15 39821868 39821901 -63673073 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 888 426 288 179 29 chr15 39821904 39822212 -63672762 + L2a LINE L2 2539 2892 -527 4 888 547 271 119 42 chr15 39822212 39822402 -63672572 + ORR1E LTR MaLR 1 204 -170 4 888 1747 146 24 20 chr15 39823089 39823442 -63671532 + RMER13B LTR ERVK 23 427 -481 4 888 5289 152 94 53 chr15 39823442 39824453 -63670521 - RLTR13D3 LTR ERVK 0 1114 51 4 888 4253 59 26 17 chr15 39824453 39824987 -63669987 + L1Md_F2 LINE L1 6044 6582 0 4 888 5289 152 94 53 chr15 39824987 39825045 -63669929 - RLTR13D3 LTR ERVK -1064 50 1 4 888 1564 209 112 33 chr15 39825045 39825436 -63669538 + RMER13B LTR ERVK 422 843 -65 4 888 279 196 0 0 chr15 39826425 39826476 -63668498 + L2a LINE L2 3370 3420 -6 4 888 579 29 0 0 chr15 39826747 39826816 -63668158 + (TTCC)n Simple_repeat Simple_repeat 3 71 0 4 888 342 268 14 0 chr15 39826819 39826890 -63668084 - ID4 SINE ID -10 73 2 4 888 223 338 77 20 chr15 39826896 39827044 -63667930 + L2a LINE L2 3208 3391 -35 4 888 246 324 25 59 chr15 39827062 39827180 -63667794 + MER5A DNA MER1_type 75 188 -1 4 888 235 214 0 0 chr15 39828053 39828095 -63666879 + polypyrimidine Low_complexity Low_complexity 3 44 0 4 888 266 31 0 30 chr15 39828096 39828163 -63666811 + (TCCCC)n Simple_repeat Simple_repeat 1 65 0 4 888 756 99 0 0 chr15 39828163 39828274 -63666700 + (TTC)n Simple_repeat Simple_repeat 2 112 0 4 888 248 131 0 21 chr15 39828735 39828746 -63666228 + polypurine Low_complexity Low_complexity 2 12 0 4 888 1006 78 0 43 chr15 39828746 39828934 -63666040 + (GGA)n Simple_repeat Simple_repeat 1 180 0 4 888 248 131 0 21 chr15 39828934 39828969 -63666005 + polypurine Low_complexity Low_complexity 13 47 0 4 888 33 0 0 0 chr15 39829011 39829044 -63665930 + AT_rich Low_complexity Low_complexity 1 33 0 4 888 229 347 13 0 chr15 39829654 39829729 -63665245 + MER63D DNA AcHobo 9 84 -977 4 888 518 265 177 77 chr15 39831875 39832186 -63662788 - MLT1A0 LTR MaLR 0 365 24 4 888 236 172 35 0 chr15 39832528 39832586 -63662388 + (TTTA)n Simple_repeat Simple_repeat 4 63 0 4 888 282 363 11 11 chr15 39832593 39832685 -63662289 - PB1D10 SINE Alu -25 92 1 4 888 351 0 0 0 chr15 39833799 39833838 -63661136 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 888 516 255 58 19 chr15 39834985 39835141 -63659833 + RSINE1 SINE B4 4 165 0 4 888 25 0 0 0 chr15 39836016 39836041 -63658933 + AT_rich Low_complexity Low_complexity 1 25 0 4 888 602 254 14 7 chr15 39836395 39836534 -63658440 + RSINE1 SINE B4 5 144 -21 4 888 185 396 9 0 chr15 39836691 39836802 -63658172 + MIRb SINE MIR 17 128 -140 4 888 854 229 133 58 chr15 39837418 39837816 -63657158 + RMER10A LTR ERVL 1 428 -14 4 888 204 135 0 0 chr15 39838848 39838885 -63656089 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 4 888 419 276 41 0 chr15 39840578 39840676 -63654298 - RSINE1 SINE B4 -63 102 1 4 888 15353 65 0 1 chr15 39840769 39842709 -63652265 + L1Md_F2 LINE L1 3650 5586 -297 4 888 7620 50 31 12 chr15 39842709 39843675 -63651299 + L1Md_F2 LINE L1 5587 6570 -12 4 888 429 297 18 0 chr15 39845748 39845859 -63649115 - MER81 DNA AcHobo -1 113 1 4 889 21 0 0 0 chr15 39846860 39846881 -63648093 + AT_rich Low_complexity Low_complexity 1 21 0 4 889 673 300 47 29 chr15 39847232 39847507 -63647467 + RMER15 LTR ERVL 296 575 0 4 889 617 247 100 21 chr15 39848011 39848201 -63646773 - B3 SINE B2 -10 206 2 4 889 437 263 10 0 chr15 39848341 39848440 -63646534 - B1_Mus2 SINE Alu -45 102 3 4 889 564 290 69 31 chr15 39849593 39849853 -63645121 - MLT1K LTR MaLR -94 501 232 4 889 294 243 121 29 chr15 39850045 39850185 -63644789 - MER57C2 LTR ERV1 -6 428 276 4 889 2288 148 77 33 chr15 39850872 39851299 -63643675 + RLTR41 LTR ERV1 1 446 0 4 889 432 37 0 0 chr15 39851357 39851411 -63643563 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 889 206 83 56 0 chr15 39851533 39851569 -63643405 + (TCTCTG)n Simple_repeat Simple_repeat 5 42 0 4 889 231 114 0 0 chr15 39851595 39851630 -63643344 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 889 245 250 14 14 chr15 39852230 39852299 -63642675 - MTE2b LTR MaLR -15 364 296 4 889 22 0 0 0 chr15 39853197 39853219 -63641755 + AT_rich Low_complexity Low_complexity 1 22 0 4 889 501 241 17 8 chr15 39854255 39854372 -63640602 - PB1D9 SINE Alu 0 120 3 4 889 3212 70 10 2 chr15 39854399 39854815 -63640159 - L1_Mus1 LINE L1 0 6567 6149 4 889 2070 241 65 8 chr15 39855578 39856467 -63638507 - Lx6 LINE L1 -26 7434 6222 4 889 357 331 92 0 chr15 39856688 39856830 -63638144 + MIR SINE MIR 20 174 -88 4 889 385 0 0 68 chr15 39857951 39858010 -63636964 + (CAAAAA)n Simple_repeat Simple_repeat 3 57 0 4 889 649 191 40 47 chr15 39858042 39858190 -63636784 + B1_Mus2 SINE Alu 1 147 0 4 889 536 353 114 51 chr15 39858701 39859208 -63635766 - MLT1H LTR MaLR -10 539 1 4 889 293 305 38 48 chr15 39859214 39859400 -63635574 + HAL1 LINE L1 101 284 -2223 5 889 925 297 77 19 chr15 39859722 39860034 -63634940 + Lx9 LINE L1 6552 6881 -763 5 889 1342 249 87 48 chr15 39860051 39860535 -63634439 + Lx9 LINE L1 6970 7472 -172 5 889 418 258 56 8 chr15 39860984 39861109 -63633865 + B1F SINE Alu 11 141 -8 5 889 238 241 0 85 chr15 39861129 39861188 -63633786 + ID4_ SINE ID 16 69 -14 5 889 495 0 0 0 chr15 39861190 39861245 -63633729 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 889 312 284 111 12 chr15 39861254 39861425 -63633549 + MLT1D LTR MaLR 27 214 -291 5 889 612 0 0 0 chr15 39861687 39861755 -63633219 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 5 889 279 0 0 0 chr15 39861766 39861797 -63633177 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 889 1826 181 55 11 chr15 39862166 39862530 -63632444 - RLTR14 LTR ERV1 0 382 3 5 889 4392 141 100 62 chr15 39862550 39862621 -63632353 - RLTR14-int LTR ERV1 0 5317 5231 5 889 3824 37 2 19 chr15 39862621 39863089 -63631885 + L1Md_F3 LINE L1 6125 6584 0 5 889 4392 141 100 62 chr15 39863089 39863597 -63631377 - RLTR14-int LTR ERV1 -87 5230 4700 5 889 270 0 0 0 chr15 39863597 39863627 -63631347 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 889 15422 154 88 41 chr15 39863627 39866841 -63628133 - RLTR14-int LTR ERV1 -618 4699 1352 5 889 6245 161 68 90 chr15 39867139 39868529 -63626445 - RLTR14-int LTR ERV1 -3957 1360 1 5 889 835 162 13 7 chr15 39868533 39868682 -63626292 - RLTR14 LTR ERV1 -4 378 229 5 889 473 236 18 28 chr15 39869708 39869817 -63625157 + PB1D10 SINE Alu 3 110 -7 5 889 192 150 0 0 chr15 39870656 39870673 -63624301 + (T)n Simple_repeat Simple_repeat 1 17 0 5 889 1254 34 0 0 chr15 39870673 39870819 -63624155 - B1_Mm SINE Alu 0 147 2 5 889 192 150 0 0 chr15 39870819 39870841 -63624133 + (T)n Simple_repeat Simple_repeat 1 22 0 5 889 4403 124 1 3 chr15 39870857 39871504 -63623470 - Lx3A LINE L1 -4 6977 6332 5 889 300 254 0 0 chr15 39871512 39871575 -63623399 - ID_B1 SINE B4 -56 168 106 5 889 369 138 0 0 chr15 39872105 39872185 -63622789 + (TCTG)n Simple_repeat Simple_repeat 1 80 0 5 889 216 184 0 0 chr15 39872183 39872232 -63622742 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 5 889 835 263 54 0 chr15 39872335 39872540 -63622434 - ID_B1 SINE B4 -7 217 2 5 889 833 101 0 7 chr15 39872540 39872680 -63622294 + (TTTC)n Simple_repeat Simple_repeat 3 141 0 5 889 1979 177 45 15 chr15 39872719 39873120 -63621854 + MTC LTR MaLR 1 413 -8 5 889 189 0 0 0 chr15 39873134 39873155 -63621819 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 889 666 191 55 17 chr15 39873394 39873567 -63621407 - B3 SINE B2 -14 181 1 5 889 1155 252 70 22 chr15 39873885 39874197 -63620777 - Lx8 LINE L1 -1022 6451 6125 5 889 973 186 0 0 chr15 39874298 39874481 -63620493 - RLTR11A LTR ERVK -4 524 342 5 889 1492 159 129 6 chr15 39874672 39874983 -63619991 - RLTR11A LTR ERVK -179 349 1 5 889 2374 171 22 53 chr15 39875035 39875541 -63619433 + RLTR31A_Mm LTR ERVK 1 490 -94 5 889 1038 290 34 3 chr15 39875559 39875857 -63619117 + Lx8 LINE L1 6884 7190 -283 5 889 357 298 48 90 chr15 39876102 39876268 -63618706 + RLTR14 LTR ERV1 224 382 0 5 889 296 333 11 0 chr15 39876285 39876372 -63618602 + Lx8 LINE L1 7216 7303 -170 5 889 225 250 25 133 chr15 39876361 39876481 -63618493 + RMER1C Other Other 1232 1338 -4 5 889 444 194 26 44 chr15 39878391 39878504 -63616470 - MLT1A1 LTR MaLR -2 406 296 5 889 351 0 0 0 chr15 39878658 39878697 -63616277 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 889 545 268 225 0 chr15 39878908 39879121 -63615853 - MLT1A1 LTR MaLR -147 261 1 5 889 5289 63 19 16 chr15 39879696 39880392 -63614582 + L1Md_F2 LINE L1 5885 6582 0 5 889 38830 11 1 7 chr15 39881174 39886581 -63608393 + L1Md_A LINE L1 215 5586 -297 5 889 9066 11 0 0 chr15 39886581 39887577 -63607397 + L1Md_A LINE L1 5587 6582 0 5 889 1756 243 30 32 chr15 39888146 39888652 -63606322 - RLTR16 LTR ERVK 0 505 1 5 889 226 311 158 6 chr15 39888724 39888891 -63606083 - MIR SINE MIR -40 228 36 5 889 253 206 13 105 chr15 39889842 39889918 -63605056 + MLT1J LTR MaLR 105 173 -339 5 889 737 166 67 62 chr15 39890951 39891144 -63603830 - B2_Mm2 SINE B2 0 195 2 5 889 591 40 0 0 chr15 39891225 39891299 -63603675 + (TG)n Simple_repeat Simple_repeat 1 74 0 5 889 433 291 45 39 chr15 39891434 39891613 -63603361 - MER121 Unknown Unknown -146 266 87 5 889 261 0 0 0 chr15 39892234 39892263 -63602711 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 889 411 21 0 0 chr15 39892263 39892310 -63602664 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 889 250 328 120 66 chr15 39892911 39893094 -63601880 - L2b LINE L2 -188 3187 2995 5 889 201 74 0 0 chr15 39893704 39893731 -63601243 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 889 1130 60 0 7 chr15 39893771 39893923 -63601051 + (TTCC)n Simple_repeat Simple_repeat 4 154 0 5 889 456 19 0 0 chr15 39894002 39894055 -63600919 + (GGAA)n Simple_repeat Simple_repeat 2 54 0 5 889 517 301 118 55 chr15 39894137 39894535 -63600439 + LTR40c LTR ERVL 40 462 -3 5 889 275 336 96 110 chr15 39894583 39894937 -63600037 - MLT1A LTR MaLR -2 372 24 5 889 319 323 133 20 chr15 39895257 39895494 -63599480 + MIR SINE MIR 2 262 0 5 889 1010 126 6 0 chr15 39895975 39896142 -63598832 + (TTC)n Simple_repeat Simple_repeat 2 169 0 5 889 371 321 54 91 chr15 39900496 39900794 -63594180 + MER57D LTR ERV1 125 411 0 5 889 760 198 152 30 chr15 39901433 39901631 -63593343 - ORR1D2 LTR MaLR -2 368 147 5 889 369 250 91 35 chr15 39901757 39901989 -63592985 - RLTR15 LTR ERVK -67 292 48 5 889 555 221 32 8 chr15 39902036 39902159 -63592815 - ORR1D2 LTR MaLR -244 126 1 5 889 319 271 53 83 chr15 39903097 39903230 -63591744 + L2a LINE L2 3094 3222 -204 5 889 29 0 0 0 chr15 39903609 39903638 -63591336 + AT_rich Low_complexity Low_complexity 1 29 0 5 889 180 326 22 22 chr15 39904114 39904205 -63590769 + MIRc SINE MIR 136 226 -42 5 889 297 228 354 0 chr15 39904500 39904627 -63590347 + Lx5 LINE L1 6879 7050 0 5 889 2833 76 3 18 chr15 39906382 39906769 -63588205 - MTB_Mm LTR MaLR -26 381 1 5 889 311 324 67 0 chr15 39907018 39907123 -63587851 + MIRb SINE MIR 35 146 -122 5 889 434 313 229 61 chr15 39907157 39907508 -63587466 + LTR16A1 LTR ERVL 47 456 0 5 889 405 0 0 0 chr15 39907602 39907647 -63587327 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 889 534 299 68 48 chr15 39907654 39907946 -63587028 + Kanga1a DNA Tc2 319 616 -138 5 889 26 0 0 0 chr15 39907953 39907979 -63586995 + AT_rich Low_complexity Low_complexity 1 26 0 5 889 670 323 102 34 chr15 39908250 39909021 -63585953 + L1M5 LINE L1 4981 5800 -373 5 889 588 257 156 0 chr15 39909027 39909245 -63585729 - MER2 DNA MER2_type -7 338 87 5 889 3009 236 55 17 chr15 39909479 39910135 -63584839 - Lx6 LINE L1 0 7460 6780 5 889 300 299 0 13 chr15 39910159 39910237 -63584737 + Tigger5 DNA MER2_type 166 242 -2164 5 889 388 287 26 0 chr15 39910233 39910348 -63584626 + Tigger5 DNA MER2_type 2286 2403 -3 5 889 315 0 0 0 chr15 39911035 39911070 -63583904 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 889 2624 92 0 3 chr15 39912569 39912896 -63582078 + ORR1A3 LTR MaLR 1 326 0 5 889 364 311 88 40 chr15 39914064 39914318 -63580656 + MTEb LTR MaLR 62 325 -45 5 889 623 345 105 77 chr15 39914950 39915626 -63579348 + LTR84b LTR ERVL 57 751 -10 5 889 231 301 65 109 chr15 39915651 39915789 -63579185 - MIRb SINE MIR -121 147 16 5 889 230 120 0 39 chr15 39915967 39916019 -63578955 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 5 889 372 352 149 31 chr15 39916511 39916960 -63578014 - L2 LINE L2 -384 3035 2534 5 889 22 35 0 0 chr15 39917000 39917029 -63577945 + AT_rich Low_complexity Low_complexity 1 29 0 5 889 355 275 119 0 chr15 39917060 39917169 -63577805 - RSINE1 SINE B4 -29 136 15 5 889 214 243 113 14 chr15 39917241 39917312 -63577662 - L2 LINE L2 -1031 2388 2311 5 889 225 65 0 0 chr15 39917325 39917356 -63577618 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 5 889 963 235 68 46 chr15 39917364 39917579 -63577395 - RMER17C LTR ERVK 0 410 180 5 889 864 31 36 36 chr15 39917579 39917746 -63577228 + (GGAGA)n Simple_repeat Simple_repeat 1 167 0 5 889 963 266 24 60 chr15 39917746 39918085 -63576889 - RMER17C LTR ERVK -156 254 1 5 889 414 261 23 0 chr15 39918110 39918198 -63576776 - PB1D7 SINE Alu -30 90 1 5 889 38987 45 0 3 chr15 39918211 39924681 -63570293 - L1Md_T LINE L1 0 6585 59 5 889 362 357 92 21 chr15 39924734 39925069 -63569905 - L2 LINE L2 -1179 2240 1882 5 889 306 311 65 18 chr15 39925330 39925545 -63569429 - MLT1B LTR MaLR -15 375 3 5 889 1245 109 49 5 chr15 39925660 39925844 -63569130 - B2_Mm2 SINE B2 -2 193 2 5 889 289 242 197 0 chr15 39925868 39925934 -63569040 - ID4_ SINE ID -3 80 2 5 889 372 329 20 27 chr15 39925953 39926103 -63568871 - B1F SINE Alu 0 149 1 5 889 423 0 0 0 chr15 39926215 39926262 -63568712 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 889 270 0 0 0 chr15 39926262 39926291 -63568683 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 889 37048 50 10 0 chr15 39926440 39931997 -63562977 + L1Md_T LINE L1 98 5586 -297 5 889 8974 36 0 0 chr15 39931997 39932993 -63561981 + L1Md_T LINE L1 5587 6582 0 5 889 672 124 0 0 chr15 39935491 39935596 -63559378 + (TTCC)n Simple_repeat Simple_repeat 4 108 0 5 889 783 32 0 0 chr15 39935603 39935697 -63559277 + (TTC)n Simple_repeat Simple_repeat 2 95 0 5 889 372 179 0 0 chr15 39935766 39935844 -63559130 + (CA)n Simple_repeat Simple_repeat 1 78 0 5 889 605 131 9 0 chr15 39936361 39936468 -63558506 + (CA)n Simple_repeat Simple_repeat 2 109 0 5 889 271 339 0 34 chr15 39936660 39936779 -63558195 - B1_Mur4 SINE Alu -1 149 35 5 889 607 298 84 104 chr15 39937904 39938249 -63556725 - ORR1E LTR MaLR -16 343 6 5 889 297 0 0 0 chr15 39939121 39939154 -63555820 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 5 889 236 342 13 13 chr15 39939224 39939301 -63555673 + MIR3 SINE MIR 112 188 -20 5 889 1269 80 0 0 chr15 39939708 39939883 -63555091 + (TTCC)n Simple_repeat Simple_repeat 3 177 0 5 889 398 271 10 10 chr15 39939888 39939985 -63554989 - PB1D10 SINE Alu -20 97 1 5 889 2270 181 143 57 chr15 39940763 39941254 -63553720 - MT2A LTR ERVL 0 533 1 5 889 7094 82 68 8 chr15 39941603 39942684 -63552290 + L1_Mus3 LINE L1 5489 6635 -3 5 889 369 0 0 0 chr15 39945264 39945305 -63549669 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 889 1441 83 16 0 chr15 39948731 39948923 -63546051 + B2_Mm2 SINE B2 1 195 0 6 889 211 304 35 30 chr15 39949320 39949435 -63545539 + MIR SINE MIR 35 150 -126 6 889 184 333 56 40 chr15 39950070 39950195 -63544779 - L2b LINE L2 0 3426 3300 6 889 614 236 140 0 chr15 39950563 39950720 -63544254 + MTEa LTR MaLR 1 179 -200 6 889 213 254 0 0 chr15 39951082 39951104 -63543870 + T-rich Low_complexity Low_complexity 46 67 0 6 889 417 39 0 0 chr15 39951104 39951155 -63543819 + (TCCC)n Simple_repeat Simple_repeat 3 53 0 6 889 213 254 0 0 chr15 39951155 39951166 -63543808 + T-rich Low_complexity Low_complexity 35 45 0 6 889 903 156 17 23 chr15 39951166 39951343 -63543631 - B2_Mm2 SINE B2 -19 176 1 6 889 213 254 0 0 chr15 39951343 39951375 -63543599 + T-rich Low_complexity Low_complexity 3 34 0 6 889 187 312 103 96 chr15 39951992 39952148 -63542826 + MIRc SINE MIR 18 174 -94 6 889 185 388 47 12 chr15 39952718 39952804 -63542170 - L2b LINE L2 -45 3330 3242 6 889 249 238 63 0 chr15 39953626 39953689 -63541285 + L2a LINE L2 3357 3423 -3 6 889 291 314 101 7 chr15 39954237 39954375 -63540599 - MIRb SINE MIR -96 172 22 6 889 387 41 0 0 chr15 39955037 39955086 -63539888 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 889 374 322 20 40 chr15 39955132 39955281 -63539693 - RSINE1 SINE B4 -2 163 18 6 889 271 258 267 68 chr15 39955296 39955487 -63539487 - B4A SINE B4 -63 229 1 6 889 477 243 86 22 chr15 39955685 39955824 -63539150 + MER20 DNA MER1_type 16 163 -56 6 889 193 288 116 9 chr15 39956311 39956423 -63538551 + MIRc SINE MIR 24 147 -121 6 889 27 0 0 0 chr15 39956579 39956606 -63538368 + AT_rich Low_complexity Low_complexity 1 27 0 6 889 427 224 71 8 chr15 39956753 39956879 -63538095 - ID_B1 SINE B4 0 224 91 6 889 525 293 22 108 chr15 39958666 39958774 -63536200 - L1_Mur3 LINE L1 -226 5654 5575 6 889 711 244 90 20 chr15 39958774 39958975 -63535999 - B3 SINE B2 -1 215 1 6 889 525 293 22 108 chr15 39958975 39959180 -63535794 - L1_Mur3 LINE L1 -306 5574 5368 6 889 1964 249 63 27 chr15 39959177 39959731 -63535243 + Lx8 LINE L1 6243 6816 -657 6 889 2121 219 113 35 chr15 39960004 39960173 -63534801 + Lx8 LINE L1 6849 7030 -443 6 889 2573 138 32 2 chr15 39960173 39960580 -63534394 + MTC LTR MaLR 1 419 -2 6 889 2121 219 113 35 chr15 39960580 39960987 -63533987 + Lx8 LINE L1 7031 7470 -3 6 889 372 22 0 0 chr15 39961607 39961652 -63533322 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 889 459 165 0 0 chr15 39961985 39962070 -63532904 + (TG)n Simple_repeat Simple_repeat 1 85 0 6 889 421 184 13 0 chr15 39962657 39962733 -63532241 - L1MB7 LINE L1 -253 5931 5855 6 889 897 204 115 46 chr15 39963783 39964087 -63530887 + RMER17C LTR ERVK 14 338 -72 6 889 234 132 0 0 chr15 39964401 39964439 -63530535 + L2a LINE L2 3374 3411 -15 6 889 499 271 113 67 chr15 39964454 39964648 -63530326 + MTD LTR MaLR 1 203 -216 6 889 390 129 0 0 chr15 39964650 39964712 -63530262 + (TA)n Simple_repeat Simple_repeat 2 63 0 6 889 228 274 42 50 chr15 39964714 39964833 -63530141 + RLTR22_Mur LTR ERVK 1309 1426 -422 6 889 635 113 79 16 chr15 39964849 39964975 -63529999 + Lx9 LINE L1 7506 7639 -5 6 889 639 234 117 19 chr15 39964998 39965203 -63529771 + MTD LTR MaLR 195 419 0 6 889 625 255 85 81 chr15 39965843 39966138 -63528836 + ORR1D2 LTR MaLR 17 312 -58 6 889 3516 327 56 38 chr15 39966857 39968760 -63526214 - RodERV21-int LTR ERV1 -105 4886 2949 6 889 714 30 30 0 chr15 39969009 39969110 -63525864 + (GA)n Simple_repeat Simple_repeat 1 104 0 6 889 470 311 37 0 chr15 39969113 39969277 -63525697 - RodERV21-int LTR ERV1 -1144 3847 3678 6 889 387 41 0 0 chr15 39969277 39969326 -63525648 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 889 6123 270 43 51 chr15 39969507 39971336 -63523638 - RodERV21-int LTR ERV1 -2450 2541 729 6 889 272 212 0 15 chr15 39972669 39972736 -63522238 + ORR1D2 LTR MaLR 305 370 0 6 889 345 75 0 0 chr15 39972750 39972803 -63522171 + (CAAAC)n Simple_repeat Simple_repeat 2 54 0 6 889 371 260 29 64 chr15 39974543 39974683 -63520291 - MER92C LTR ERV1 -419 135 1 6 889 260 340 91 45 chr15 39975028 39975182 -63519792 - MER20 DNA MER1_type -49 170 10 6 889 318 235 0 0 chr15 39975223 39975372 -63519602 + (CA)n Simple_repeat Simple_repeat 2 150 0 6 889 279 0 0 0 chr15 39975378 39975409 -63519565 + (TC)n Simple_repeat Simple_repeat 1 31 0 6 889 420 20 0 0 chr15 39975409 39975457 -63519517 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 889 273 276 0 93 chr15 39976089 39976197 -63518777 + MTEa LTR MaLR 1 98 -281 6 890 23 33 0 0 chr15 39977016 39977046 -63517928 + AT_rich Low_complexity Low_complexity 1 30 0 6 890 2436 124 40 22 chr15 39977072 39977518 -63517456 + RMER6B LTR ERVK 1 454 -7 6 890 761 322 88 58 chr15 39977916 39978483 -63516491 + MTE-int LTR MaLR 38 621 -959 6 890 657 326 32 58 chr15 39979226 39979568 -63515406 + MTE-int LTR MaLR 741 1073 -507 6 890 180 77 0 0 chr15 39980013 39980039 -63514935 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 6 890 334 200 143 11 chr15 39980047 39980138 -63514836 + MTE-int LTR MaLR 1435 1537 -43 6 890 255 157 0 89 chr15 39980202 39980258 -63514716 + C573_MM Other Other 101 151 -371 6 890 214 238 0 73 chr15 39980779 39980847 -63514127 + GA-rich Low_complexity Low_complexity 4 66 0 6 890 1874 122 142 6 chr15 39981196 39981519 -63513455 - ORR1B2 LTR MaLR 0 367 1 6 890 366 239 0 0 chr15 39981799 39981891 -63513083 + CT-rich Low_complexity Low_complexity 2 93 0 6 890 274 302 156 0 chr15 39981904 39982000 -63512974 - PB1D10 SINE Alu 0 117 7 6 890 241 336 85 26 chr15 39982015 39982168 -63512806 + MER34A LTR ERV1 392 553 -18 6 890 211 333 67 0 chr15 39984071 39984161 -63510813 + L2a LINE L2 3318 3413 -13 6 890 501 156 0 0 chr15 39984563 39984659 -63510315 + (TG)n Simple_repeat Simple_repeat 2 97 0 6 890 405 0 0 0 chr15 39985095 39985140 -63509834 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 890 281 26 26 0 chr15 39985321 39985359 -63509615 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 890 832 148 11 11 chr15 39986210 39986388 -63508586 + (TCTCTG)n Simple_repeat Simple_repeat 3 180 0 6 890 670 265 26 0 chr15 39986427 39986578 -63508396 - RSINE1 SINE B4 0 165 11 6 890 374 85 17 0 chr15 39987167 39987226 -63507748 + (TG)n Simple_repeat Simple_repeat 2 61 0 6 890 333 0 0 0 chr15 39987689 39987726 -63507248 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 890 1600 322 137 25 chr15 39987747 39988687 -63506287 - Lx8 LINE L1 -153 7320 6275 6 890 1599 280 44 25 chr15 39988668 39989188 -63505786 - Lx7 LINE L1 -1508 6188 5659 6 890 227 261 32 11 chr15 39989431 39989524 -63505450 + Kanga1a DNA Tc2 276 370 -384 6 890 232 355 72 66 chr15 39990187 39990519 -63504455 - LTR16C LTR ERVL -81 408 75 6 890 279 140 0 0 chr15 39991141 39991191 -63503783 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 890 532 286 16 69 chr15 39991259 39991299 -63503675 + MLT1A0 LTR MaLR 5 44 -321 6 890 1370 81 43 0 chr15 39991299 39991485 -63503489 + B2_Mm2 SINE B2 1 194 -1 6 890 532 286 16 69 chr15 39991485 39991632 -63503342 + MLT1A0 LTR MaLR 45 182 -183 6 890 290 248 32 82 chr15 39992106 39992122 -63502852 - CYRA11_Mm Unknown Y-chromosome -296 321 191 6 890 662 126 8 16 chr15 39992122 39992243 -63502731 + URR1B DNA MER1_type 91 210 -15 6 890 3135 23 0 112 chr15 39992246 39992685 -63502289 + RLTR10 LTR ERVK 1 390 0 6 890 290 248 32 82 chr15 39992685 39992702 -63502272 - CYRA11_Mm Unknown Y-chromosome -430 187 172 6 890 318 316 6 0 chr15 39992841 39993025 -63501949 + (TATATG)n Simple_repeat Simple_repeat 1 185 0 6 890 3695 148 102 5 chr15 39993967 39994597 -63500377 + RLTR17 LTR ERVK 2 692 0 6 890 736 188 29 0 chr15 39995343 39995481 -63499493 - B1_Mus1 SINE Alu -5 143 2 6 890 330 265 74 22 chr15 39995506 39995641 -63499333 + L1M5 LINE L1 5639 5780 -344 6 890 288 0 0 0 chr15 39995909 39995941 -63499033 + (TC)n Simple_repeat Simple_repeat 2 33 0 6 890 261 0 0 0 chr15 39995941 39995969 -63499005 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 890 475 184 11 0 chr15 39996133 39996220 -63498754 - RSINE1 SINE B4 -37 128 41 6 890 379 0 0 38 chr15 39997969 39998022 -63496952 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 6 890 207 0 0 0 chr15 39998481 39998504 -63496470 + (T)n Simple_repeat Simple_repeat 1 23 0 6 890 219 69 0 0 chr15 40001008 40001037 -63493937 + (T)n Simple_repeat Simple_repeat 1 29 0 1 890 1263 54 0 0 chr15 40002644 40002886 -63492088 + (CA)n Simple_repeat Simple_repeat 1 242 0 2 890 358 268 56 35 chr15 40002931 40003074 -63491900 + B1F SINE Alu 4 149 0 3 890 215 237 17 0 chr15 40003138 40003197 -63491777 + ID4 SINE ID 2 61 -22 4 890 270 348 70 7 chr15 40003672 40003814 -63491160 + L2a LINE L2 3276 3426 0 5 890 793 324 49 9 chr15 40005138 40005465 -63489509 - Lx6 LINE L1 -136 7324 6985 6 890 651 295 11 5 chr15 40005990 40006174 -63488800 + B3 SINE B2 2 186 -30 7 890 316 0 45 0 chr15 40006937 40006981 -63487993 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 8 890 202 209 0 0 chr15 40007238 40007266 -63487708 + T-rich Low_complexity Low_complexity 16 43 0 9 890 246 32 0 0 chr15 40007266 40007297 -63487677 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 1 890 202 209 0 0 chr15 40007297 40007311 -63487663 + T-rich Low_complexity Low_complexity 2 15 0 1 890 22 0 0 0 chr15 40007639 40007661 -63487313 + AT_rich Low_complexity Low_complexity 1 22 0 1 890 25 0 0 0 chr15 40008554 40008579 -63486395 + AT_rich Low_complexity Low_complexity 1 25 0 1 890 748 314 68 78 chr15 40009545 40009839 -63485135 + B4A SINE B4 2 292 0 1 890 525 68 0 0 chr15 40009877 40009951 -63485023 + (TCC)n Simple_repeat Simple_repeat 2 75 0 1 890 315 0 0 0 chr15 40011099 40011134 -63483840 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 890 374 278 127 0 chr15 40011150 40011276 -63483698 - B3A SINE B2 -56 142 1 1 890 195 114 0 0 chr15 40011355 40011390 -63483584 + (A)n Simple_repeat Simple_repeat 1 35 0 1 890 296 326 10 59 chr15 40012817 40012918 -63482056 - MER63D DNA AcHobo -694 367 272 1 890 495 274 130 10 chr15 40013186 40013378 -63481596 - B3 SINE B2 0 216 2 2 890 23 78 0 0 chr15 40013524 40013575 -63481399 + AT_rich Low_complexity Low_complexity 1 51 0 2 890 200 167 0 0 chr15 40014205 40014235 -63480739 + polypyrimidine Low_complexity Low_complexity 2 31 0 2 890 539 361 24 32 chr15 40014278 40014524 -63480450 - B4A SINE B4 0 292 49 2 890 505 322 56 22 chr15 40015730 40015908 -63479066 + MTEa LTR MaLR 1 184 -195 2 890 2370 243 10 30 chr15 40017361 40017967 -63477007 - Lx5 LINE L1 -2 7048 6455 2 890 384 111 0 0 chr15 40019074 40019146 -63475828 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 890 1150 263 125 0 chr15 40019207 40019485 -63475489 + MTEa LTR MaLR 1 300 -79 2 890 1293 44 0 0 chr15 40019485 40019645 -63475329 + (CAAAC)n Simple_repeat Simple_repeat 3 162 0 2 890 1150 263 125 0 chr15 40019645 40019693 -63475281 + MTEa LTR MaLR 301 367 -12 2 890 22 0 0 0 chr15 40020292 40020314 -63474660 + AT_rich Low_complexity Low_complexity 1 22 0 2 890 217 296 10 30 chr15 40021843 40021944 -63473030 + (TG)n Simple_repeat Simple_repeat 2 100 0 3 890 23524 139 27 19 chr15 40022417 40025838 -63469136 - Lx LINE L1 0 6654 3144 3 890 284 0 28 0 chr15 40025838 40025874 -63469100 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 890 23524 159 19 23 chr15 40025874 40026028 -63468946 - Lx LINE L1 -2740 3143 3008 3 890 5372 57 10 4 chr15 40026028 40026719 -63468255 - L1_Mus2 LINE L1 0 6566 5872 3 890 23524 159 19 23 chr15 40026719 40027901 -63467073 - Lx LINE L1 -2876 3007 1868 3 890 279 71 0 0 chr15 40027901 40027943 -63467031 + (TTTAA)n Simple_repeat Simple_repeat 4 45 0 3 890 23524 139 15 17 chr15 40027943 40028662 -63466312 - Lx LINE L1 -4016 1867 1160 3 890 7235 99 9 19 chr15 40029006 40030610 -63464364 - L1_Mus3 LINE L1 0 6638 5056 3 890 32220 87 17 2 chr15 40030651 40036437 -63458537 + L1Md_F2 LINE L1 149 6029 -553 3 890 36548 11 2 7 chr15 40036438 40041839 -63453135 + L1Md_A LINE L1 214 5586 -297 3 890 8850 14 0 0 chr15 40041839 40042835 -63452139 + L1Md_A LINE L1 5587 6582 0 3 890 3714 87 37 26 chr15 40042818 40043385 -63451589 + L1Md_F2 LINE L1 6005 6577 -5 3 890 9100 129 9 16 chr15 40043388 40044972 -63450002 - L1_Mus3 LINE L1 -949 4934 3362 3 890 2540 135 7 6 chr15 40044963 40045926 -63449048 - L1VL4 LINE L1 -2325 1234 338 3 890 2611 43 3 15 chr15 40046058 40046388 -63448586 + L1Md_F2 LINE L1 6257 6582 0 3 890 374 272 19 0 chr15 40046467 40046570 -63448404 - MLT1A1 LTR MaLR -12 396 292 4 890 539 103 10 0 chr15 40046617 40046714 -63448260 + (GA)n Simple_repeat Simple_repeat 2 99 0 4 890 184 311 0 0 chr15 40047390 40047435 -63447539 + MIR SINE MIR 15 59 -203 4 890 33 43 0 0 chr15 40047440 40047487 -63447487 + AT_rich Low_complexity Low_complexity 1 47 0 4 890 22 0 0 0 chr15 40047658 40047680 -63447294 + AT_rich Low_complexity Low_complexity 1 22 0 4 890 243 0 0 0 chr15 40049184 40049211 -63445763 + (T)n Simple_repeat Simple_repeat 1 27 0 4 890 308 161 0 16 chr15 40049399 40049462 -63445512 + CT-rich Low_complexity Low_complexity 2 63 0 4 890 1026 148 0 0 chr15 40049483 40049659 -63445315 + (TCC)n Simple_repeat Simple_repeat 3 178 0 4 890 555 245 119 30 chr15 40049694 40049862 -63445112 + B3 SINE B2 28 210 -6 4 890 30 0 0 0 chr15 40049870 40049900 -63445074 + AT_rich Low_complexity Low_complexity 1 30 0 4 890 370 283 90 62 chr15 40049915 40050092 -63444882 - B3A SINE B2 -15 183 2 5 890 626 356 107 6 chr15 40050410 40050738 -63444236 + MLT1J1 LTR MaLR 54 414 -30 5 890 459 293 17 58 chr15 40054406 40054580 -63440394 - L2c LINE L2 -10 3377 3211 5 890 285 274 97 46 chr15 40054681 40054918 -63440056 + ERVL-E-int LTR ERVL 5347 5595 -72 5 890 625 286 36 51 chr15 40054936 40055131 -63439843 - B3A SINE B2 0 198 7 5 890 198 351 51 69 chr15 40055663 40055880 -63439094 - L3 LINE CR1 -704 3785 3573 5 890 207 0 0 0 chr15 40056026 40056049 -63438925 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 890 649 336 42 8 chr15 40056265 40056529 -63438445 + B4A SINE B4 2 274 -18 5 890 180 145 17 52 chr15 40056574 40056632 -63438342 + (CATA)n Simple_repeat Simple_repeat 1 56 0 5 890 779 176 0 0 chr15 40056734 40056859 -63438115 + B1_Mus2 SINE Alu 9 133 -14 5 890 576 70 0 0 chr15 40056886 40056972 -63438002 + (CA)n Simple_repeat Simple_repeat 1 86 0 6 890 279 0 0 0 chr15 40056972 40057002 -63437972 + (GA)n Simple_repeat Simple_repeat 2 32 0 6 890 7112 70 1 12 chr15 40057475 40058479 -63436495 + L1Md_F2 LINE L1 4594 5586 -297 6 890 8172 48 0 6 chr15 40058479 40059478 -63435496 + L1Md_F2 LINE L1 5587 6579 -3 6 890 21 36 0 0 chr15 40059584 40059612 -63435362 + AT_rich Low_complexity Low_complexity 1 28 0 6 890 260 229 27 41 chr15 40059862 40059935 -63435039 - MTE2a LTR MaLR -19 360 289 6 890 390 298 58 32 chr15 40060019 40060175 -63434799 + MER5A DNA MER1_type 8 167 -22 6 890 185 422 23 0 chr15 40060383 40060511 -63434463 + L2 LINE L2 2704 2834 -585 6 890 1139 76 0 0 chr15 40061337 40061482 -63433492 + B1_Mus1 SINE Alu 1 145 -3 6 890 183 294 0 81 chr15 40066157 40066231 -63428743 + MIRc SINE MIR 42 109 -159 6 890 392 248 67 18 chr15 40066757 40066866 -63428108 - PB1D10 SINE Alu -21 128 10 6 890 306 26 0 0 chr15 40066866 40066904 -63428070 - L1_Mus2 LINE L1 -257 6309 6272 7 890 1695 83 4 36 chr15 40066904 40067155 -63427819 + L1_Mus2 LINE L1 6324 6566 0 7 890 367 336 0 23 chr15 40067944 40068075 -63426899 - MTEb LTR MaLR -4 375 248 7 890 933 150 99 120 chr15 40068158 40068460 -63426514 + ORR1B1 LTR MaLR 1 321 -8 7 890 341 292 103 55 chr15 40068451 40068596 -63426378 - MTEb LTR MaLR -207 152 1 7 890 277 236 67 82 chr15 40069045 40069179 -63425795 - MIR SINE MIR -6 256 125 7 890 259 333 38 9 chr15 40069385 40069491 -63425483 - PB1D10 SINE Alu 0 117 9 7 890 1470 234 81 0 chr15 40069658 40070004 -63424970 - ORR1D1 LTR MaLR 0 374 1 7 890 401 73 18 0 chr15 40070332 40070387 -63424587 - ORR1D1 LTR MaLR -318 56 1 7 890 321 295 0 0 chr15 40070413 40070491 -63424483 - RSINE1 SINE B4 -84 81 4 7 890 24 0 0 0 chr15 40071744 40071768 -63423206 + AT_rich Low_complexity Low_complexity 1 24 0 7 890 283 218 60 60 chr15 40072081 40072164 -63422810 - ID SINE ID -141 83 1 7 890 32 0 0 0 chr15 40072609 40072641 -63422333 + AT_rich Low_complexity Low_complexity 1 32 0 8 890 363 235 17 0 chr15 40072657 40072772 -63422202 - Lx9 LINE L1 -7 7637 7521 8 890 2648 171 45 2 chr15 40072781 40073249 -63421725 - RLTR17 LTR ERVK 0 692 205 8 890 2276 159 21 90 chr15 40073321 40073798 -63421176 + RLTR41 LTR ERV1 1 444 -2 8 890 321 47 0 0 chr15 40074413 40074456 -63420518 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 8 890 1053 81 15 0 chr15 40074456 40074592 -63420382 - B1_Mus2 SINE Alu -9 138 1 8 890 21 0 0 0 chr15 40075387 40075408 -63419566 + AT_rich Low_complexity Low_complexity 1 21 0 8 890 468 77 0 0 chr15 40075732 40075797 -63419177 + (TG)n Simple_repeat Simple_repeat 1 65 0 8 890 317 191 0 9 chr15 40075797 40075903 -63419071 + GA-rich Low_complexity Low_complexity 2 106 0 8 890 539 244 128 17 chr15 40075996 40076175 -63418799 - B3 SINE B2 -17 199 1 8 890 512 232 204 69 chr15 40076454 40076773 -63418201 - RCHARR1 DNA MER1_type -267 707 346 9 890 363 266 38 51 chr15 40076827 40076990 -63417984 + B3 SINE B2 1 158 -35 9 890 500 295 59 145 chr15 40076936 40077273 -63417701 - RCHARR1 DNA MER1_type -664 310 3 9 890 180 0 0 0 chr15 40077903 40077923 -63417051 + (TA)n Simple_repeat Simple_repeat 2 21 0 9 890 200 208 35 70 chr15 40081418 40081475 -63413499 - MIRb SINE MIR -6 262 208 9 890 569 190 78 0 chr15 40081758 40081900 -63413074 + Lx6 LINE L1 7304 7456 -4 9 890 32 0 0 0 chr15 40081913 40081945 -63413029 + AT_rich Low_complexity Low_complexity 1 32 0 9 890 385 310 138 23 chr15 40082004 40082222 -63412752 - MIR SINE MIR -3 259 17 9 890 825 260 10 10 chr15 40082274 40082476 -63412498 + B3 SINE B2 1 202 -14 9 890 382 292 26 0 chr15 40082711 40082824 -63412150 + RSINE1 SINE B4 3 118 -47 9 890 480 18 0 0 chr15 40082827 40082884 -63412090 + (CA)n Simple_repeat Simple_repeat 1 57 0 9 890 756 221 0 0 chr15 40082922 40083188 -63411786 + (TG)n Simple_repeat Simple_repeat 1 266 0 1 890 218 178 0 100 chr15 40083826 40083876 -63411098 + B4A SINE B4 3 47 -245 1 890 225 365 12 0 chr15 40083904 40083989 -63410985 + B4A SINE B4 186 271 -21 1 890 200 234 21 0 chr15 40084018 40084065 -63410909 + (CATA)n Simple_repeat Simple_repeat 1 48 0 1 890 949 251 31 0 chr15 40084153 40084376 -63410598 + Lx8 LINE L1 6568 6797 -676 1 890 257 197 15 0 chr15 40084914 40084980 -63409994 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 890 21 57 0 0 chr15 40085442 40085477 -63409497 + AT_rich Low_complexity Low_complexity 1 35 0 1 890 3442 25 5 0 chr15 40086066 40086460 -63408514 - MTA_Mm LTR MaLR 0 396 1 1 890 201 121 0 0 chr15 40086754 40086787 -63408187 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 890 729 265 0 32 chr15 40086793 40086980 -63407994 - B3A SINE B2 -16 182 2 1 890 225 0 0 0 chr15 40088695 40088720 -63406254 + (T)n Simple_repeat Simple_repeat 1 25 0 1 890 614 309 73 0 chr15 40090087 40090265 -63404709 + B3 SINE B2 2 192 -24 1 890 21 0 0 0 chr15 40090844 40090865 -63404109 + AT_rich Low_complexity Low_complexity 1 21 0 1 890 288 315 35 53 chr15 40091750 40091864 -63403110 - PB1D10 SINE Alu 0 117 6 1 890 1274 234 138 6 chr15 40092166 40092506 -63402468 + MTD LTR MaLR 20 404 -15 1 890 249 83 0 0 chr15 40092881 40092917 -63402057 + (TCTG)n Simple_repeat Simple_repeat 1 36 0 1 890 665 329 50 35 chr15 40092986 40093147 -63401827 - B4A SINE B4 -20 272 104 1 890 3164 41 20 8 chr15 40093147 40093538 -63401436 + MTA_Mm LTR MaLR 1 396 0 1 890 8017 69 3 68 chr15 40093538 40094712 -63400262 + MTA_Mm-int LTR MaLR 1 1098 0 1 890 3297 46 5 0 chr15 40094712 40095106 -63399868 + MTA_Mm LTR MaLR 1 396 0 1 890 665 329 50 35 chr15 40095106 40095203 -63399771 - B4A SINE B4 -189 103 10 1 890 743 298 72 44 chr15 40095629 40095826 -63399148 - L1MB3 LINE L1 -350 5833 5615 1 890 592 69 29 0 chr15 40095826 40095928 -63399046 + (TCTCTG)n Simple_repeat Simple_repeat 2 106 0 1 890 1187 68 0 0 chr15 40095931 40096078 -63398896 - B1_Mus1 SINE Alu -1 147 1 1 890 743 298 72 44 chr15 40096078 40096374 -63398600 - L1MB3 LINE L1 -569 5614 5322 1 890 230 245 38 0 chr15 40096652 40096705 -63398269 + L2c LINE L2 3331 3385 -2 1 890 326 275 148 16 chr15 40096859 40096981 -63397993 - MER5B DNA MER1_type -36 142 5 1 890 919 236 38 9 chr15 40097322 40097532 -63397442 + B3 SINE B2 1 216 0 1 890 21 71 0 0 chr15 40098284 40098326 -63396648 + AT_rich Low_complexity Low_complexity 1 42 0 1 890 32008 78 4 4 chr15 40098768 40100975 -63393999 - L1Md_F2 LINE L1 -12 6570 4376 1 890 3085 41 0 0 chr15 40100975 40101343 -63393631 - L1Md_T LINE L1 -1 6581 6214 1 890 32008 89 5 3 chr15 40101343 40105562 -63389412 - L1Md_F2 LINE L1 -1508 4375 135 1 890 203 250 45 30 chr15 40106039 40106105 -63388869 + MIR3 SINE MIR 102 168 -40 1 890 328 250 0 0 chr15 40107330 40107398 -63387576 - ID4 SINE ID -14 69 2 1 890 221 362 0 0 chr15 40107410 40107479 -63387495 - PB1D10 SINE Alu -42 75 7 1 111 252 411 53 12 chr15 40107931 40108101 -63386873 + MLT1I LTR MaLR 223 399 -12 1 891 378 0 0 0 chr15 40108267 40108309 -63386665 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 891 21 0 0 0 chr15 40108705 40108726 -63386248 + AT_rich Low_complexity Low_complexity 1 21 0 1 891 238 323 98 78 chr15 40108930 40109175 -63385799 + L2c LINE L2 3038 3287 -100 1 891 277 350 78 44 chr15 40109294 40109500 -63385474 - MLT1I LTR MaLR 0 411 199 1 891 700 303 5 0 chr15 40109971 40110179 -63384795 - B3 SINE B2 -7 209 1 1 891 411 321 6 45 chr15 40111140 40111316 -63383658 - MIR SINE MIR -8 254 86 1 891 445 221 46 5 chr15 40111747 40111884 -63383090 - B1_Mur1 SINE Alu -1 148 5 1 891 489 17 0 0 chr15 40112395 40112453 -63382521 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 891 1003 148 34 17 chr15 40114008 40114187 -63380787 + Lx9 LINE L1 6388 6569 -1075 1 891 2994 50 1 2 chr15 40114187 40114572 -63380402 + MTA_Mm LTR MaLR 1 365 -31 1 891 1831 177 3 3 chr15 40114576 40114911 -63380063 + Lx9 LINE L1 6643 6977 -667 1 891 4484 149 60 16 chr15 40114912 40115791 -63379183 + Lx3C LINE L1 5739 6656 -320 1 891 22766 154 21 21 chr15 40116060 40118968 -63376006 + Lx LINE L1 578 3483 -2400 1 891 387 0 0 0 chr15 40118968 40119011 -63375963 + (TAAAA)n Simple_repeat Simple_repeat 2 44 0 1 891 22766 169 19 7 chr15 40119011 40120856 -63374118 + Lx LINE L1 3484 5352 -531 1 891 1259 106 5 11 chr15 40120856 40121046 -63373928 + B2_Mm1a SINE B2 5 193 0 1 891 22766 124 42 15 chr15 40121046 40122308 -63372666 + Lx LINE L1 5353 6649 -5 1 891 365 382 75 40 chr15 40122339 40122617 -63372357 + B4A SINE B4 2 289 -3 1 891 1813 296 101 20 chr15 40123022 40123864 -63371110 - Lx8 LINE L1 -2 7471 6562 1 891 400 277 43 65 chr15 40123888 40124027 -63370947 - Lx8 LINE L1 -1158 6315 6180 1 891 272 270 63 0 chr15 40124229 40124292 -63370682 + ID_B1 SINE B4 75 141 -83 1 891 383 320 0 0 chr15 40124240 40124337 -63370637 + PB1D10 SINE Alu 9 105 -12 1 891 565 13 39 0 chr15 40124337 40124414 -63370560 + (CAAAA)n Simple_repeat Simple_repeat 4 83 0 1 891 257 323 32 0 chr15 40124942 40125035 -63369939 - MIRb SINE MIR 0 262 165 1 891 21 36 0 0 chr15 40125857 40125885 -63369089 + AT_rich Low_complexity Low_complexity 1 28 0 1 891 582 290 29 0 chr15 40125939 40126077 -63368897 + RSINE1 SINE B4 3 144 -21 1 891 222 37 0 0 chr15 40126118 40126145 -63368829 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 1 891 3765 116 49 11 chr15 40126781 40127398 -63367576 - Lx LINE L1 0 6654 6015 1 891 322 101 29 0 chr15 40127995 40128064 -63366910 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 1 891 185 83 28 0 chr15 40128058 40128094 -63366880 + (CAA)n Simple_repeat Simple_repeat 2 38 0 1 891 242 271 43 86 chr15 40129153 40129270 -63365704 + L2c LINE L2 3121 3232 -155 1 891 183 262 24 0 chr15 40129430 40129472 -63365502 + L3 LINE CR1 3936 3978 -511 1 891 5079 235 76 56 chr15 40130218 40130515 -63364459 - Lx7 LINE L1 -11 7685 7387 1 891 504 0 0 0 chr15 40130515 40130571 -63364403 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 891 5079 235 76 56 chr15 40130571 40131774 -63363200 - Lx7 LINE L1 -310 7386 6171 1 891 468 0 0 0 chr15 40131774 40131826 -63363148 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 891 5079 235 76 56 chr15 40131826 40131973 -63363001 - Lx7 LINE L1 -1526 6170 6006 1 891 1058 285 42 27 chr15 40132094 40132526 -63362448 - RLTR16 LTR ERVK -12 493 3 1 891 248 216 0 0 chr15 40132526 40132577 -63362397 - ORR1A2 LTR MaLR 0 326 276 1 891 32236 68 2 21 chr15 40132579 40134102 -63360872 - L1Md_F2 LINE L1 0 6582 5085 1 891 315 26 0 0 chr15 40134102 40134140 -63360834 - tRNA-Tyr-TAC tRNA tRNA -38 38 1 1 891 32236 68 2 21 chr15 40134140 40134624 -63360350 - L1Md_F2 LINE L1 0 5084 4607 1 891 935 26 17 0 chr15 40134624 40134741 -63360233 + (TTCC)n Simple_repeat Simple_repeat 4 122 0 1 891 1155 56 6 6 chr15 40134746 40134907 -63360067 - L1Md_F3 LINE L1 0 6584 6424 1 891 32236 74 1 30 chr15 40134907 40134984 -63359990 - L1Md_F2 LINE L1 -1277 4606 4604 1 891 515 131 0 34 chr15 40134984 40135103 -63359871 - L1Md_F2 LINE L1 -3 6579 6465 1 891 32236 83 8 30 chr15 40135103 40139320 -63355654 - L1Md_F2 LINE L1 -1280 4603 380 1 891 2096 91 0 69 chr15 40139321 40139641 -63355333 - ORR1A2 LTR MaLR -29 298 1 1 891 522 285 7 0 chr15 40139641 40139785 -63355189 - Lx6 LINE L1 -1449 6011 5867 1 891 1137 100 0 0 chr15 40139785 40139955 -63355019 + (TTCC)n Simple_repeat Simple_repeat 3 172 0 1 891 2617 171 58 19 chr15 40140090 40140621 -63354353 - Lx6 LINE L1 -21 5859 5308 1 891 6645 172 108 39 chr15 40140628 40141740 -63353234 - Lx6 LINE L1 -2724 3156 1929 1 891 1082 122 33 16 chr15 40141740 40141753 -63353221 - B2_Mm2 SINE B2 -7 188 177 1 891 429 20 0 0 chr15 40141753 40141803 -63353171 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 1 891 1082 122 33 16 chr15 40141803 40141973 -63353001 - B2_Mm2 SINE B2 -19 176 2 1 891 6645 172 108 39 chr15 40141973 40142050 -63352924 - Lx6 LINE L1 -3952 1928 1866 1 891 1889 148 30 57 chr15 40142050 40142386 -63352588 + ORR1A4 LTR MaLR 3 329 0 1 891 6645 179 90 26 chr15 40142386 40143651 -63351323 - Lx6 LINE L1 -4015 1865 543 1 891 200 254 29 15 chr15 40144358 40144426 -63350548 + (CATA)n Simple_repeat Simple_repeat 4 72 0 1 891 378 0 0 0 chr15 40145194 40145236 -63349738 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 891 345 255 184 6 chr15 40145237 40145395 -63349579 - MLT1C LTR MaLR -281 186 1 1 891 1495 171 69 113 chr15 40147025 40147387 -63347587 + ORR1A1 LTR MaLR 1 346 0 1 891 2878 256 132 35 chr15 40147409 40148580 -63346394 + Lx9 LINE L1 6347 7631 -13 1 891 441 0 0 0 chr15 40149321 40149370 -63345604 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 891 285 154 0 55 chr15 40149412 40149467 -63345507 - B2_Mm2 SINE B2 -133 62 11 1 891 14213 65 8 0 chr15 40149504 40151438 -63343536 + L1Md_F2 LINE L1 3638 5586 -297 1 891 7854 60 0 0 chr15 40151438 40152422 -63342552 + L1Md_F2 LINE L1 5587 6570 -12 1 891 13003 68 2 33 chr15 40152928 40155451 -63339523 + L1Md_A LINE L1 511 2953 -2930 1 891 2093 24 0 0 chr15 40155443 40155696 -63339278 + L1Md_A LINE L1 5334 5586 -297 1 891 8603 25 0 0 chr15 40155696 40156688 -63338286 + L1Md_A LINE L1 5587 6578 -4 1 891 718 211 214 75 chr15 40156905 40157186 -63337788 + Lx9 LINE L1 7158 7477 -167 1 891 410 68 43 43 chr15 40157186 40157278 -63337696 + (TCTCTG)n Simple_repeat Simple_repeat 2 93 0 1 891 693 76 0 0 chr15 40157279 40157384 -63337590 + (CA)n Simple_repeat Simple_repeat 2 106 0 1 891 346 136 15 0 chr15 40157407 40157473 -63337501 + Lx9 LINE L1 7567 7633 -11 1 891 756 297 41 25 chr15 40157643 40157885 -63337089 - MTE2a LTR MaLR -125 254 9 1 891 411 334 57 51 chr15 40157891 40158225 -63336749 + L1MC LINE L1 2547 2882 -3264 1 891 657 312 6 30 chr15 40158225 40158390 -63336584 + RSINE1 SINE B4 5 165 0 1 891 300 328 63 105 chr15 40158231 40158422 -63336552 + B3A SINE B2 10 192 -6 1 891 207 377 0 0 chr15 40158565 40158626 -63336348 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 891 316 270 44 2 chr15 40158903 40159104 -63335870 - L1MCc LINE L1 -5448 1680 1389 1 891 474 337 25 25 chr15 40160392 40160590 -63334384 + MLT1B LTR MaLR 193 390 0 1 891 22 35 0 0 chr15 40160632 40160661 -63334313 + AT_rich Low_complexity Low_complexity 1 29 0 1 891 219 283 118 11 chr15 40160849 40160942 -63334032 + MIRc SINE MIR 56 158 -110 1 891 555 16 0 0 chr15 40161137 40161201 -63333773 + (CACAC)n Simple_repeat Simple_repeat 3 66 0 1 891 1564 31 0 0 chr15 40162520 40162711 -63332263 - L1_Mus1 LINE L1 -244 6323 6133 1 891 1965 53 0 4 chr15 40162711 40162958 -63332016 + L1_Mus1 LINE L1 6322 6567 0 1 891 291 346 10 12 chr15 40163642 40163735 -63331239 + PB1D10 SINE Alu 1 98 -51 1 891 185 131 32 32 chr15 40163759 40163822 -63331152 + GA-rich Low_complexity Low_complexity 1 63 0 1 891 424 93 27 0 chr15 40163817 40163892 -63331082 + (GGAA)n Simple_repeat Simple_repeat 3 79 0 1 891 198 235 20 0 chr15 40164714 40164765 -63330209 + L2c LINE L2 3024 3075 -312 2 891 342 0 0 0 chr15 40165134 40165172 -63329802 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 891 734 89 9 0 chr15 40165184 40165296 -63329678 + (TCTA)n Simple_repeat Simple_repeat 2 114 0 2 891 443 289 120 99 chr15 40166052 40166394 -63328580 + ORR1E LTR MaLR 6 354 -5 2 891 6045 64 32 5 chr15 40166574 40167374 -63327600 - L1Md_F2 LINE L1 -11 6571 5750 2 891 464 326 73 92 chr15 40168534 40168956 -63326018 + MLT2D LTR ERVL 1 414 0 2 891 3463 30 0 0 chr15 40169851 40170253 -63324721 + L1Md_F2 LINE L1 6181 6582 0 2 891 420 58 0 0 chr15 40170341 40170393 -63324581 + (TTTC)n Simple_repeat Simple_repeat 4 55 0 2 891 797 199 6 0 chr15 40170393 40170569 -63324405 + CT-rich Low_complexity Low_complexity 1 177 0 2 891 971 126 18 93 chr15 40170626 40170838 -63324136 - ORR1A4 LTR MaLR -160 234 4 2 891 444 19 0 0 chr15 40171250 40171303 -63323671 + (CTAAA)n Simple_repeat Simple_repeat 3 55 0 2 891 242 158 34 34 chr15 40173706 40173765 -63321209 + CT-rich Low_complexity Low_complexity 2 60 0 2 891 260 369 87 26 chr15 40173945 40174176 -63320798 - L2 LINE L2 -848 2571 2327 2 891 2229 209 45 6 chr15 40174573 40175079 -63319895 - RMER1B Other Other 0 1066 541 2 891 938 232 80 10 chr15 40175053 40175341 -63319633 - RMER1B Other Other -653 413 106 2 891 786 166 39 19 chr15 40175588 40175742 -63319232 - MTC LTR MaLR -27 394 238 2 891 352 236 0 11 chr15 40175783 40175963 -63319011 + (TG)n Simple_repeat Simple_repeat 2 179 0 2 891 528 212 0 0 chr15 40175978 40176219 -63318755 + (TG)n Simple_repeat Simple_repeat 1 241 0 2 891 669 194 0 0 chr15 40176260 40176440 -63318534 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 891 336 130 0 0 chr15 40176472 40176541 -63318433 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 891 181 254 83 14 chr15 40176767 40176839 -63318135 + MIRb SINE MIR 22 98 -170 2 891 669 223 25 5 chr15 40177019 40177222 -63317752 - L1M4 LINE L1 -3197 2949 2743 2 891 308 156 0 0 chr15 40177651 40177696 -63317278 - HAL1-3A_ME LINE L1 -839 2019 1975 2 891 204 125 0 0 chr15 40177696 40177728 -63317246 + (TATG)n Simple_repeat Simple_repeat 3 34 0 2 891 261 218 155 40 chr15 40177734 40177882 -63317092 - L1M2 LINE L1 -2360 3783 3619 2 891 219 36 0 0 chr15 40177883 40177911 -63317063 + (TTG)n Simple_repeat Simple_repeat 1 28 0 2 891 216 0 0 0 chr15 40177911 40177935 -63317039 + (TGG)n Simple_repeat Simple_repeat 3 26 0 2 891 218 106 0 21 chr15 40177933 40177981 -63316993 + (TTTTG)n Simple_repeat Simple_repeat 1 47 0 2 891 260 261 66 16 chr15 40177983 40178104 -63316870 - L1MC LINE L1 -2532 3614 3488 2 891 551 302 95 57 chr15 40178139 40178696 -63316278 - L1MC LINE L1 -2641 3505 2880 2 891 347 198 69 59 chr15 40178714 40178816 -63316158 - Lx4B LINE L1 -4 7054 6952 2 891 357 301 101 0 chr15 40178821 40179040 -63315934 - L1MCb LINE L1 -3248 3316 3076 2 891 440 324 18 9 chr15 40179860 40180078 -63314896 - L1MCb LINE L1 -5780 265 46 2 891 188 330 58 17 chr15 40180267 40180387 -63314587 + L2 LINE L2 2666 2790 -629 2 891 255 296 12 0 chr15 40180646 40180727 -63314247 - PB1D10 SINE Alu -8 109 28 2 891 477 50 0 0 chr15 40181063 40181123 -63313851 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 891 21 0 0 0 chr15 40181434 40181455 -63313519 + AT_rich Low_complexity Low_complexity 1 21 0 2 891 25 51 0 0 chr15 40182402 40182441 -63312533 + AT_rich Low_complexity Low_complexity 1 39 0 2 891 351 0 0 0 chr15 40182517 40182556 -63312418 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 891 454 228 11 0 chr15 40182569 40182661 -63312313 - RSINE1 SINE B4 -71 94 2 2 891 1212 157 36 9 chr15 40183969 40184188 -63310786 - URR1B DNA MER1_type 0 225 1 2 891 210 37 0 0 chr15 40184305 40184332 -63310642 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 2 891 255 362 106 5 chr15 40185348 40185537 -63309437 + MIRb SINE MIR 26 233 -35 2 891 392 111 14 0 chr15 40185975 40186047 -63308927 + (TC)n Simple_repeat Simple_repeat 2 74 0 2 891 23 33 0 0 chr15 40186376 40186406 -63308568 + AT_rich Low_complexity Low_complexity 1 30 0 2 891 24 32 0 0 chr15 40188434 40188465 -63306509 + AT_rich Low_complexity Low_complexity 1 31 0 2 891 342 278 104 19 chr15 40189685 40189839 -63305135 - MIR SINE MIR -77 185 19 2 891 338 291 119 6 chr15 40190162 40190321 -63304653 + L3 LINE CR1 1960 2136 -2353 2 891 241 281 0 0 chr15 40190512 40190569 -63304405 + GA-rich Low_complexity Low_complexity 1 57 0 2 891 486 332 96 74 chr15 40192079 40192456 -63302518 + LTR16A1 LTR ERVL 58 442 -14 2 891 402 244 0 0 chr15 40195179 40195257 -63299717 + RSINE1 SINE B4 12 89 -76 2 891 399 113 0 0 chr15 40195312 40195374 -63299600 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 891 223 372 72 26 chr15 40196363 40196515 -63298459 - L2b LINE L2 -4 3371 3213 2 891 2499 50 0 0 chr15 40196848 40197151 -63297823 - L1Md_T LINE L1 -2 6580 6278 2 891 416 338 45 0 chr15 40197152 40197309 -63297665 - MIR SINE MIR -10 252 89 2 891 367 321 0 30 chr15 40197783 40197918 -63297056 - B1F SINE Alu -17 132 2 2 891 399 356 55 52 chr15 40198696 40199099 -63295875 + HAL1 LINE L1 419 822 -1685 2 891 873 238 19 9 chr15 40199754 40199966 -63295008 - B3 SINE B2 0 216 3 2 891 807 11 0 0 chr15 40204192 40204284 -63290690 + (CA)n Simple_repeat Simple_repeat 1 92 0 2 891 411 56 0 0 chr15 40204767 40204821 -63290153 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 891 219 182 18 0 chr15 40205138 40205193 -63289781 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 2 891 249 195 0 0 chr15 40205194 40205235 -63289739 - ID_B1 SINE B4 -7 217 177 2 891 220 292 44 44 chr15 40205235 40205262 -63289712 - PB1D9 SINE Alu -7 113 46 2 891 240 277 115 21 chr15 40206516 40206527 -63288447 - B4A SINE B4 -103 189 86 2 891 378 226 83 0 chr15 40206527 40206611 -63288363 - PB1D10 SINE Alu -26 91 1 2 891 775 259 34 24 chr15 40206953 40207159 -63287815 + ID_B1 SINE B4 1 208 -16 2 891 242 288 61 24 chr15 40207967 40208049 -63286925 - ID_B1 SINE B4 -26 198 114 2 891 254 296 40 66 chr15 40209164 40209346 -63285628 - L2a LINE L2 0 3426 3200 2 891 261 57 0 0 chr15 40211057 40211092 -63283882 + (A)n Simple_repeat Simple_repeat 1 35 0 2 891 192 97 0 0 chr15 40211108 40211139 -63283835 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 891 204 149 0 0 chr15 40211158 40211205 -63283769 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 891 369 102 0 0 chr15 40212020 40212079 -63282895 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 2 891 216 182 0 0 chr15 40213736 40213780 -63281194 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 891 236 253 121 18 chr15 40213784 40213949 -63281025 - L1MA8 LINE L1 -93 6198 6017 2 891 1608 295 99 24 chr15 40213970 40214734 -63280240 - Lx8 LINE L1 -69 7404 6583 2 891 2555 45 148 0 chr15 40214744 40215230 -63279744 + L1Md_F2 LINE L1 5421 5978 -604 2 891 1536 204 14 137 chr15 40215236 40215661 -63279313 - RMER20B LTR ERVK -202 425 53 2 891 1557 156 64 58 chr15 40215705 40216017 -63278957 - RLTR23 LTR ERV1 0 430 117 2 891 1444 231 40 20 chr15 40216010 40216023 -63278951 + RLTR31A_Mm LTR ERVK 92 104 -480 2 891 549 0 0 0 chr15 40216023 40216084 -63278890 + (GA)n Simple_repeat Simple_repeat 2 62 0 2 891 1444 230 177 25 chr15 40216084 40216472 -63278502 + RLTR31A_Mm LTR ERVK 105 561 0 2 891 595 48 56 19 chr15 40216934 40217041 -63277933 + (GGGAGA)n Simple_repeat Simple_repeat 2 112 0 2 891 427 383 29 38 chr15 40217519 40217758 -63277216 + MLT1H LTR MaLR 52 288 -261 2 891 858 318 45 32 chr15 40219397 40219777 -63275197 - MamRep605 Unknown Unknown -472 404 20 2 891 28 29 0 0 chr15 40220711 40220746 -63274228 + AT_rich Low_complexity Low_complexity 1 35 0 2 891 232 211 0 26 chr15 40220926 40221004 -63273970 + CT-rich Low_complexity Low_complexity 3 78 0 2 891 1907 197 104 35 chr15 40221091 40221580 -63273394 + Lx6 LINE L1 5424 5946 -1514 2 891 1647 165 41 86 chr15 40221580 40221998 -63272976 - RMER17B LTR ERVK -559 399 1 2 891 1309 206 45 20 chr15 40221998 40222355 -63272619 - Lx7 LINE L1 -1372 6324 5959 2 891 1652 172 103 0 chr15 40222355 40222675 -63272299 + Lx6 LINE L1 6314 6666 -794 2 891 3440 236 47 16 chr15 40222697 40223610 -63271364 + Lx7 LINE L1 6749 7689 -7 2 891 270 0 0 0 chr15 40223610 40223640 -63271334 + (TAAAA)n Simple_repeat Simple_repeat 4 33 0 2 891 215 91 58 43 chr15 40223896 40223965 -63271009 + (TCTCTG)n Simple_repeat Simple_repeat 1 70 0 2 891 1214 86 16 5 chr15 40226562 40226750 -63268224 - L1_Mus3 LINE L1 -1 6637 6448 2 891 354 303 18 9 chr15 40228913 40229023 -63265951 + PB1D10 SINE Alu 1 111 -6 2 891 182 227 200 74 chr15 40229600 40229695 -63265279 - L2c LINE L2 -17 3370 3264 2 891 180 179 0 0 chr15 40229958 40229997 -63264977 + CT-rich Low_complexity Low_complexity 1 39 0 2 891 908 126 53 27 chr15 40230040 40230228 -63264746 - Lx4B LINE L1 -1 7057 6865 2 891 1183 133 8 128 chr15 40230734 40230984 -63263990 + URR1A DNA MER1_type 6 225 -1 2 891 224 50 0 70 chr15 40231022 40231065 -63263909 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2 891 219 69 0 0 chr15 40231203 40231232 -63263742 + (T)n Simple_repeat Simple_repeat 1 29 0 2 891 196 279 0 0 chr15 40231904 40231947 -63263027 + MIRb SINE MIR 124 166 -102 2 891 340 305 109 0 chr15 40233542 40233670 -63261304 - MLT1F LTR MaLR 0 548 407 2 891 238 298 114 128 chr15 40233690 40233776 -63261198 - MLT1F LTR MaLR -268 280 213 2 891 435 19 0 0 chr15 40233776 40233828 -63261146 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 891 238 298 114 128 chr15 40233828 40234022 -63260952 - MLT1F LTR MaLR -336 212 4 2 891 24 0 0 0 chr15 40237938 40237962 -63257012 + AT_rich Low_complexity Low_complexity 1 24 0 2 891 234 286 77 77 chr15 40238897 40238988 -63255986 + RSINE1 SINE B4 4 94 -71 2 111 2060 44 0 4 chr15 40238992 40239244 -63255730 + L1_Mus2 LINE L1 6316 6566 0 2 892 918 31 8 15 chr15 40240158 40240290 -63254684 + (TAGA)n Simple_repeat Simple_repeat 1 131 0 2 892 1936 228 98 31 chr15 40241433 40241800 -63253174 + RMER15 LTR ERVL 27 419 -156 2 892 3030 63 15 10 chr15 40241800 40242198 -63252776 - MTB LTR MaLR 0 400 1 2 892 6954 95 29 65 chr15 40242198 40243337 -63251637 - MTB-int LTR MaLR 0 1098 1 2 892 3656 74 6 2 chr15 40243339 40243812 -63251162 - MT2C_Mm LTR ERVL 0 475 1 3 892 1936 228 98 31 chr15 40243812 40243921 -63251053 + RMER15 LTR ERVL 420 530 -45 2 892 987 25 0 0 chr15 40243921 40244039 -63250935 + (TG)n Simple_repeat Simple_repeat 2 119 0 3 892 1936 228 98 31 chr15 40244039 40244069 -63250905 + RMER15 LTR ERVL 531 570 -5 2 892 1897 194 16 49 chr15 40244122 40244567 -63250407 + RMER10A LTR ERVL 1 430 -12 3 892 1120 232 64 34 chr15 40245153 40245420 -63249554 - ORR1D2 LTR MaLR -8 362 88 3 892 615 258 84 132 chr15 40245419 40245746 -63249228 + MTE2a LTR MaLR 87 404 -15 3 892 186 133 0 0 chr15 40246021 40246051 -63248923 + (TATG)n Simple_repeat Simple_repeat 3 32 0 3 892 284 115 97 16 chr15 40246106 40246168 -63248806 + RLTR22_Mur LTR ERVK 1031 1097 -751 3 892 8363 140 109 55 chr15 40246667 40246914 -63248060 + RLTR22_Mur LTR ERVK 5 194 -1654 3 892 450 0 0 0 chr15 40246914 40246964 -63248010 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 892 8363 140 109 55 chr15 40246964 40247739 -63247235 + RLTR22_Mur LTR ERVK 195 1058 -790 3 892 1218 27 0 0 chr15 40247739 40247889 -63247085 + (GA)n Simple_repeat Simple_repeat 1 150 0 3 892 8363 140 109 55 chr15 40247889 40248615 -63246359 + RLTR22_Mur LTR ERVK 1059 1847 -1 3 892 549 303 14 59 chr15 40248617 40248795 -63246179 + RMER15 LTR ERVL 350 523 -52 3 892 2059 145 10 79 chr15 40248795 40249200 -63245774 + ORR1C1 LTR MaLR 1 377 -1 3 892 549 303 14 59 chr15 40249200 40249242 -63245732 + RMER15 LTR ERVL 524 560 -15 3 892 221 310 40 53 chr15 40249279 40249354 -63245620 - L2 LINE L2 -339 3080 3007 3 892 21 0 0 0 chr15 40249558 40249579 -63245395 + AT_rich Low_complexity Low_complexity 1 21 0 3 892 392 285 144 83 chr15 40250052 40250232 -63244742 - B3 SINE B2 -24 192 2 3 892 571 335 128 48 chr15 40250296 40250806 -63244168 - HAL1 LINE L1 -1046 1461 911 3 892 675 256 20 30 chr15 40250806 40251003 -63243971 - B3A SINE B2 -3 195 1 3 892 571 335 128 48 chr15 40251003 40251031 -63243943 - HAL1 LINE L1 -1597 910 880 3 892 540 0 0 0 chr15 40251900 40251960 -63243014 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 892 212 288 41 0 chr15 40254064 40254137 -63240837 + (CACCAT)n Simple_repeat Simple_repeat 2 77 0 3 892 452 268 24 53 chr15 40254752 40254950 -63240024 - MIRb SINE MIR -18 250 58 3 892 1121 278 51 70 chr15 40255581 40256146 -63238828 - RLTR20B3 LTR ERVK 0 528 1 3 892 1161 68 0 20 chr15 40256264 40256414 -63238560 + B1_Mus1 SINE Alu 2 148 0 3 892 194 81 27 0 chr15 40256463 40256500 -63238474 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 3 892 468 0 0 0 chr15 40256626 40256678 -63238296 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 892 192 40 0 0 chr15 40256683 40256708 -63238266 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 892 921 85 0 0 chr15 40256708 40256848 -63238126 + (GA)n Simple_repeat Simple_repeat 1 141 0 3 892 1347 331 66 12 chr15 40256871 40257511 -63237463 - Lx8 LINE L1 -609 6864 6191 3 892 23 0 0 0 chr15 40257518 40257541 -63237433 + AT_rich Low_complexity Low_complexity 1 23 0 3 892 6131 120 39 16 chr15 40257715 40258856 -63236118 - Lx LINE L1 0 6654 5490 3 892 334 259 106 0 chr15 40258999 40259084 -63235890 + MTEa LTR MaLR 7 100 -279 3 892 466 285 13 7 chr15 40259306 40259458 -63235516 - Lx8 LINE L1 -847 6626 6474 3 892 27 0 0 0 chr15 40259922 40259949 -63235025 + AT_rich Low_complexity Low_complexity 1 27 0 3 892 1128 244 31 11 chr15 40260068 40260329 -63234645 + MTEa LTR MaLR 107 372 -7 3 892 455 346 63 5 chr15 40260347 40260553 -63234421 + MTEa-int LTR MaLR 15 232 -1348 3 892 1654 289 133 4 chr15 40260531 40261034 -63233940 + MTEa-int LTR MaLR 789 1356 -224 3 892 585 284 24 38 chr15 40261065 40261274 -63233700 - B3 SINE B2 -10 206 1 3 892 450 324 54 76 chr15 40261399 40261716 -63233258 + MLT1A0 LTR MaLR 49 358 -7 3 892 868 109 20 0 chr15 40261775 40261922 -63233052 + (TTTC)n Simple_repeat Simple_repeat 4 153 0 3 892 283 188 23 23 chr15 40261922 40262009 -63232965 + CT-rich Low_complexity Low_complexity 1 87 0 3 892 418 310 63 23 chr15 40262343 40262518 -63232456 - MIR SINE MIR -25 237 56 3 892 2039 293 96 29 chr15 40263910 40264810 -63230164 - Lx8 LINE L1 0 7473 6514 3 892 21 0 0 0 chr15 40265169 40265190 -63229784 + AT_rich Low_complexity Low_complexity 1 21 0 3 892 2700 141 7 14 chr15 40265190 40265628 -63229346 - Lx4A LINE L1 -1 7057 6623 3 892 450 278 84 56 chr15 40265653 40265832 -63229142 - B3A SINE B2 -3 213 30 3 892 29 28 0 0 chr15 40268786 40268822 -63226152 + AT_rich Low_complexity Low_complexity 1 36 0 3 892 3050 56 8 8 chr15 40269347 40269742 -63225232 + L1Md_F2 LINE L1 6188 6582 0 3 892 220 372 9 17 chr15 40270939 40271054 -63223920 - ID_B1 SINE B4 -23 201 88 3 892 2052 233 111 34 chr15 40271532 40272189 -63222785 - RMER1C Other Other -13 1329 622 3 892 670 284 17 51 chr15 40272321 40272466 -63222508 + B3A SINE B2 2 141 -57 3 892 291 130 0 0 chr15 40272466 40272520 -63222454 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 892 670 284 17 51 chr15 40272520 40272552 -63222422 + B3A SINE B2 142 173 -25 3 892 36728 22 13 22 chr15 40273088 40274564 -63220410 - L1Md_T LINE L1 0 6582 5107 3 892 1316 75 0 0 chr15 40274564 40274577 -63220397 - B2_Mm1t SINE B2 -19 174 162 3 892 309 51 0 0 chr15 40274577 40274616 -63220358 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 3 892 1316 75 0 0 chr15 40274616 40274776 -63220198 - B2_Mm1t SINE B2 -32 161 2 3 892 36728 19 7 41 chr15 40274776 40279704 -63215270 - L1Md_T LINE L1 -777 5106 209 3 892 21 0 0 0 chr15 40279874 40279895 -63215079 + AT_rich Low_complexity Low_complexity 1 21 0 3 892 425 50 0 16 chr15 40280570 40280631 -63214343 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 3 892 336 306 8 16 chr15 40280770 40280893 -63214081 + CT-rich Low_complexity Low_complexity 4 125 0 3 892 349 288 8 83 chr15 40280898 40281019 -63213955 - PB1D9 SINE Alu -8 112 1 3 892 278 348 69 15 chr15 40282022 40282226 -63212748 + L1MEc LINE L1 42 256 -6144 3 892 247 264 78 33 chr15 40282755 40282908 -63212066 + L1MEc LINE L1 3626 3785 -2534 3 892 336 24 0 0 chr15 40283370 40283411 -63211563 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 892 462 83 0 0 chr15 40283411 40283483 -63211491 + (GA)n Simple_repeat Simple_repeat 2 73 0 3 892 416 307 29 0 chr15 40283514 40283654 -63211320 - RSINE1 SINE B4 -19 146 3 3 892 21 0 0 0 chr15 40284402 40284423 -63210551 + AT_rich Low_complexity Low_complexity 1 21 0 3 892 198 317 98 10 chr15 40284551 40284653 -63210321 - L2 LINE L2 -542 2877 2767 3 892 251 276 108 81 chr15 40286401 40286697 -63208277 + L1MEg LINE L1 951 1254 -4830 3 892 192 420 18 0 chr15 40286856 40286968 -63208006 - L2a LINE L2 0 3426 3313 3 892 247 197 15 62 chr15 40287403 40287468 -63207506 + MER119 DNA MER1_type 434 495 -88 3 892 564 225 104 73 chr15 40287867 40288005 -63206969 + B3A SINE B2 1 152 -46 3 892 366 23 0 0 chr15 40288005 40288048 -63206926 + (TC)n Simple_repeat Simple_repeat 1 43 0 3 892 564 225 104 73 chr15 40288048 40288101 -63206873 + B3A SINE B2 153 198 0 3 892 234 346 10 10 chr15 40288663 40288765 -63206209 - L1MC LINE L1 -2207 5675 5574 3 892 240 357 18 9 chr15 40289003 40289116 -63205858 - MIRm SINE MIR -111 165 52 3 892 1025 225 9 9 chr15 40289358 40289582 -63205392 - URR1A DNA MER1_type 0 226 3 3 892 5028 77 17 28 chr15 40290291 40291014 -63203960 - Lx3_Mus LINE L1 -687 6322 5608 3 892 535 87 0 0 chr15 40291011 40291080 -63203894 + Lx3_Mus LINE L1 6319 6387 -622 3 892 2036 122 24 12 chr15 40291082 40291422 -63203552 + Lx3_Mus LINE L1 6666 7009 0 3 892 270 375 37 52 chr15 40291654 40291789 -63203185 + B1F SINE Alu 13 145 -4 3 892 366 107 0 0 chr15 40293201 40293257 -63201717 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 892 219 150 33 16 chr15 40293273 40293334 -63201640 + CT-rich Low_complexity Low_complexity 2 63 0 3 892 22 0 0 0 chr15 40293355 40293377 -63201597 + AT_rich Low_complexity Low_complexity 1 22 0 3 892 183 156 0 0 chr15 40294044 40294076 -63200898 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 892 4053 4 11 0 chr15 40294676 40295135 -63199839 - L1Md_T LINE L1 0 6582 6119 3 892 3360 76 25 38 chr15 40295163 40295308 -63199666 - MusHAL1 LINE L1 -291 2421 2293 3 892 546 29 0 0 chr15 40295308 40295376 -63199598 + (TTTC)n Simple_repeat Simple_repeat 2 69 0 3 892 3360 76 25 38 chr15 40295376 40295761 -63199213 - MusHAL1 LINE L1 -420 2292 1899 3 892 566 28 0 14 chr15 40296325 40296398 -63198576 + (TCTA)n Simple_repeat Simple_repeat 1 72 0 3 892 402 254 109 0 chr15 40296424 40296534 -63198440 - RSINE1 SINE B4 -39 126 5 3 892 2541 225 9 47 chr15 40296667 40296736 -63198238 - RMER15 LTR ERVL -25 550 483 3 892 2164 131 3 0 chr15 40296736 40297064 -63197910 + ORR1A4 LTR MaLR 1 329 0 3 892 2541 225 9 47 chr15 40297064 40297200 -63197774 - RMER15 LTR ERVL -93 482 349 3 892 198 0 0 0 chr15 40297200 40297222 -63197752 + (CAA)n Simple_repeat Simple_repeat 3 24 0 3 892 2541 225 9 47 chr15 40297222 40297585 -63197389 - RMER15 LTR ERVL -227 348 4 3 892 258 159 69 42 chr15 40298011 40298083 -63196891 - L1M2 LINE L1 -436 5855 5782 3 892 600 14 0 0 chr15 40298172 40298241 -63196733 + (TC)n Simple_repeat Simple_repeat 2 70 0 3 892 2166 201 99 40 chr15 40298789 40299365 -63195609 + RMER6C LTR ERVK 81 690 0 3 892 558 54 0 0 chr15 40299419 40299493 -63195481 + (CA)n Simple_repeat Simple_repeat 2 75 0 3 892 404 293 82 8 chr15 40299501 40299635 -63195339 - RSINE1 SINE B4 -19 146 3 3 892 302 318 100 40 chr15 40301007 40301256 -63193718 - L1MC LINE L1 -2090 5792 5529 3 892 527 282 31 19 chr15 40301326 40301485 -63193489 - RSINE1 SINE B4 0 165 5 3 892 243 0 0 0 chr15 40301542 40301569 -63193405 + (ACTG)n Simple_repeat Simple_repeat 1 27 0 3 892 766 320 35 19 chr15 40302628 40302886 -63192088 + B4 SINE B4 15 276 -16 3 892 21 0 0 0 chr15 40303341 40303362 -63191612 + AT_rich Low_complexity Low_complexity 1 21 0 3 892 29 28 0 0 chr15 40303685 40303721 -63191253 + AT_rich Low_complexity Low_complexity 1 36 0 3 892 485 265 62 59 chr15 40303982 40304271 -63190703 - L1MC5 LINE L1 -487 7474 7185 3 892 233 288 0 17 chr15 40304505 40304565 -63190409 - MER117 DNA MER1_type -47 150 92 3 892 215 198 10 55 chr15 40304685 40304753 -63190221 + L2a LINE L2 3320 3426 0 3 892 492 244 0 0 chr15 40305594 40305774 -63189200 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 892 243 0 0 0 chr15 40306377 40306404 -63188570 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 892 213 288 0 17 chr15 40308116 40308176 -63186798 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 892 180 0 0 0 chr15 40308674 40308694 -63186280 + (A)n Simple_repeat Simple_repeat 1 20 0 4 892 931 321 63 6 chr15 40309905 40310240 -63184734 + MLT1A0 LTR MaLR 7 360 -5 4 892 229 167 14 70 chr15 40310839 40310856 -63184118 + A-rich Low_complexity Low_complexity 5 20 0 4 892 671 229 84 25 chr15 40310856 40311058 -63183916 + B3 SINE B2 2 215 -1 4 892 229 167 14 70 chr15 40311058 40311111 -63183863 + A-rich Low_complexity Low_complexity 21 71 0 4 892 1627 294 127 13 chr15 40311132 40312236 -63182738 + Lx8 LINE L1 6243 7471 -2 4 892 213 224 0 0 chr15 40312645 40312703 -63182271 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 892 971 150 5 58 chr15 40314513 40314718 -63180256 + Lx3B LINE L1 6777 6970 -3 4 892 233 169 0 71 chr15 40315252 40315322 -63179652 + C-rich Low_complexity Low_complexity 3 67 0 4 892 387 0 0 0 chr15 40315788 40315831 -63179143 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 892 845 287 39 25 chr15 40316154 40316436 -63178538 + B4A SINE B4 1 286 -6 4 892 3825 225 36 102 chr15 40316826 40318239 -63176735 + RMER1A Other Other 2 1005 -25 4 892 22 0 0 0 chr15 40318669 40318691 -63176283 + AT_rich Low_complexity Low_complexity 1 22 0 4 892 7462 107 3 3 chr15 40320346 40321517 -63173457 - L1_Mus4 LINE L1 -2 6634 5466 4 892 790 166 82 39 chr15 40322116 40322298 -63172676 + Lx5 LINE L1 6630 6819 -231 4 892 344 162 14 0 chr15 40322301 40322375 -63172599 + Lx5 LINE L1 6973 7047 -3 4 892 5432 94 9 1 chr15 40322393 40323224 -63171750 - L1_Mus3 LINE L1 -648 5918 5077 4 892 2384 91 6 0 chr15 40323227 40323545 -63171429 + L1_Mus3 LINE L1 5910 6229 -409 4 892 923 315 45 37 chr15 40326106 40326482 -63168492 - MTE2b LTR MaLR 0 379 1 4 892 1106 150 34 11 chr15 40326626 40326843 -63168131 + ORR1A4 LTR MaLR 116 371 -23 4 892 549 357 68 68 chr15 40326846 40327138 -63167836 - B4A SINE B4 0 292 1 4 892 1414 197 63 136 chr15 40327147 40327332 -63167642 - RMER1C Other Other 0 1342 1198 4 892 1538 10 8 0 chr15 40327332 40327719 -63167255 + (GAA)n Simple_repeat Simple_repeat 1 390 0 4 892 1414 197 63 136 chr15 40327719 40328006 -63166968 - RMER1C Other Other -145 1197 904 4 892 344 283 120 0 chr15 40328074 40328166 -63166808 + PB1D10 SINE Alu 7 109 -8 4 892 506 315 0 0 chr15 40328240 40328367 -63166607 + B1_Mur1 SINE Alu 3 129 -20 4 892 1270 6 38 0 chr15 40328367 40328526 -63166448 + (CATATA)n Simple_repeat Simple_repeat 1 165 0 4 892 23 0 0 0 chr15 40328540 40328563 -63166411 + AT_rich Low_complexity Low_complexity 1 23 0 4 892 216 346 0 0 chr15 40330423 40330504 -63164470 + (TG)n Simple_repeat Simple_repeat 2 82 0 4 892 387 0 0 0 chr15 40332417 40332460 -63162514 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 892 624 81 0 0 chr15 40334414 40334501 -63160473 + (GGGA)n Simple_repeat Simple_repeat 4 90 0 4 892 282 274 149 33 chr15 40334961 40335080 -63159894 - MLT1G3 LTR MaLR -353 226 96 4 892 267 31 0 0 chr15 40335369 40335401 -63159573 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 892 7741 44 1 2 chr15 40335666 40336757 -63158217 - L1Md_F2 LINE L1 -1 6581 5493 4 892 865 320 64 18 chr15 40336778 40337233 -63157741 - Lx8 LINE L1 -415 7058 6583 4 892 203 310 58 33 chr15 40337772 40337892 -63157082 + MIRb SINE MIR 98 220 -48 4 892 24 0 0 0 chr15 40338381 40338405 -63156569 + AT_rich Low_complexity Low_complexity 1 24 0 4 892 2464 194 32 61 chr15 40339726 40340315 -63154659 - RMER15 LTR ERVL -2 573 2 4 892 30 19 0 54 chr15 40340662 40340690 -63154284 + AT_rich Low_complexity Low_complexity 1 27 0 4 892 5250 144 47 3 chr15 40340690 40340809 -63154165 - Lx4A LINE L1 -2 7056 6929 4 892 180 0 0 0 chr15 40340809 40340829 -63154145 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 892 5250 144 47 3 chr15 40340829 40341581 -63153393 - Lx4A LINE L1 -130 6928 6148 4 892 30 19 0 54 chr15 40341581 40341608 -63153366 + AT_rich Low_complexity Low_complexity 1 26 0 4 892 181 292 41 14 chr15 40341927 40342000 -63152974 - L3 LINE CR1 -1867 2622 2548 4 892 261 83 0 0 chr15 40342351 40342387 -63152587 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 892 838 323 39 8 chr15 40342402 40342658 -63152316 - B4 SINE B4 -4 288 25 4 892 1780 194 111 126 chr15 40342848 40343468 -63151506 - RMER19C LTR ERVK 0 611 1 4 892 386 370 67 0 chr15 40345649 40345768 -63149206 + RSINE1 SINE B4 15 141 -24 4 892 346 336 67 30 chr15 40345828 40345963 -63149011 + B1F SINE Alu 2 141 -8 4 892 23 54 0 0 chr15 40346297 40346334 -63148640 + AT_rich Low_complexity Low_complexity 1 37 0 4 892 1103 154 10 46 chr15 40346447 40346644 -63148330 + MTC LTR MaLR 224 413 -8 4 892 1404 289 52 14 chr15 40347517 40347963 -63147011 + Lx5 LINE L1 6588 7050 0 4 892 283 45 0 43 chr15 40349454 40349501 -63145473 + (TAA)n Simple_repeat Simple_repeat 2 46 0 4 892 382 289 53 53 chr15 40350509 40350659 -63144315 - RMER15 LTR ERVL 0 575 426 4 892 1072 271 55 81 chr15 40350662 40351047 -63143927 - MTE2b LTR MaLR -2 377 3 4 892 2075 316 79 47 chr15 40351050 40352403 -63142571 - MTE2b-int LTR MaLR -1 1579 27 4 892 482 286 44 60 chr15 40352525 40352619 -63142355 - MTEa LTR MaLR -117 262 169 4 892 276 30 0 0 chr15 40352619 40352652 -63142322 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 892 482 286 44 60 chr15 40352652 40352739 -63142235 - MTEa LTR MaLR -211 168 84 4 892 21 0 0 0 chr15 40354437 40354458 -63140516 + AT_rich Low_complexity Low_complexity 1 21 0 4 892 793 250 73 0 chr15 40354461 40354653 -63140321 - B3 SINE B2 -8 208 3 4 892 189 0 0 0 chr15 40356366 40356387 -63138587 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 892 1391 259 16 97 chr15 40358643 40359127 -63135847 - Lx6 LINE L1 -5 7455 7011 4 892 372 22 0 0 chr15 40359979 40360024 -63134950 + (TGG)n Simple_repeat Simple_repeat 3 47 0 4 892 518 63 13 0 chr15 40360024 40360103 -63134871 + (TG)n Simple_repeat Simple_repeat 2 81 0 4 892 354 98 0 0 chr15 40360694 40360745 -63134229 + (A)n Simple_repeat Simple_repeat 1 51 0 4 892 719 183 17 6 chr15 40364657 40364833 -63130141 + GA-rich Low_complexity Low_complexity 3 180 0 4 893 771 187 15 0 chr15 40370643 40370777 -63124197 - B1_Mus2 SINE Alu 0 147 12 4 893 644 321 65 22 chr15 40370948 40371177 -63123797 - MER2 DNA MER2_type -1 344 106 4 893 570 297 64 20 chr15 40371494 40371851 -63123123 - L1MA8 LINE L1 -142 6149 5777 4 893 696 280 121 53 chr15 40371947 40372211 -63122763 + B4 SINE B4 8 289 -3 4 893 231 36 0 0 chr15 40372272 40372300 -63122674 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 893 356 227 8 0 chr15 40372308 40372427 -63122547 + GA-rich Low_complexity Low_complexity 2 121 0 4 893 34 55 0 0 chr15 40372625 40372680 -63122294 + AT_rich Low_complexity Low_complexity 1 55 0 4 893 333 47 0 0 chr15 40373224 40373267 -63121707 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 893 4999 111 51 8 chr15 40373363 40373740 -63121234 - Lx LINE L1 -207 6447 6046 4 893 3235 36 10 0 chr15 40373740 40374132 -63120842 + MTA_Mm LTR MaLR 1 396 0 4 893 4999 122 39 7 chr15 40374132 40374761 -63120213 - Lx LINE L1 -609 6045 5406 4 893 1230 115 6 6 chr15 40374790 40374965 -63120009 - B2_Mm2 SINE B2 -19 176 2 4 893 1634 29 19 0 chr15 40375394 40375602 -63119372 - L1_Mus2 LINE L1 -562 6004 5793 4 893 4012 75 43 2 chr15 40375602 40376139 -63118835 + L1_Mus2 LINE L1 6008 6566 0 4 893 297 173 0 0 chr15 40376441 40376493 -63118481 - PB1D10 SINE Alu -32 85 34 4 893 203 289 88 11 chr15 40376873 40376964 -63118010 - L2 LINE L2 -1464 1955 1858 4 893 414 0 0 0 chr15 40377222 40377268 -63117706 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 893 406 286 47 8 chr15 40377273 40377400 -63117574 - B1F2 SINE Alu -14 135 4 4 893 189 100 39 20 chr15 40377535 40377586 -63117388 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 4 893 1703 94 4 8 chr15 40378486 40378742 -63116232 - L1_Mus4 LINE L1 -5 6631 6377 4 893 489 290 95 20 chr15 40379839 40379987 -63114987 - RSINE1 SINE B4 -6 159 1 4 893 4646 141 63 46 chr15 40380858 40381800 -63113174 + RMER17B LTR ERVK 1 958 0 4 893 940 226 41 21 chr15 40381816 40382010 -63112964 + B3 SINE B2 19 216 0 4 893 277 135 56 0 chr15 40382193 40382282 -63112692 + (TA)n Simple_repeat Simple_repeat 2 95 0 4 893 192 77 0 0 chr15 40382435 40382461 -63112513 + (CAT)n Simple_repeat Simple_repeat 1 26 0 4 893 270 275 0 14 chr15 40382465 40382535 -63112439 - ID4 SINE ID -13 70 2 4 893 252 0 0 0 chr15 40382795 40382823 -63112151 + (CAA)n Simple_repeat Simple_repeat 2 29 0 4 893 405 0 0 0 chr15 40383657 40383702 -63111272 + (TC)n Simple_repeat Simple_repeat 1 45 0 4 893 631 292 30 11 chr15 40383782 40384045 -63110929 - Lx7 LINE L1 -365 7331 7064 4 893 217 220 11 32 chr15 40385125 40385219 -63109755 + GA-rich Low_complexity Low_complexity 4 95 0 4 893 723 196 0 0 chr15 40385232 40385400 -63109574 + GA-rich Low_complexity Low_complexity 4 171 0 4 893 1895 138 66 0 chr15 40385404 40385708 -63109266 - ORR1A2 LTR MaLR -3 324 1 4 893 7255 125 57 21 chr15 40385708 40387121 -63107853 - ORR1A2-int LTR MaLR 0 1963 427 4 893 1284 97 10 0 chr15 40387136 40387444 -63107530 + (GGAGA)n Simple_repeat Simple_repeat 1 310 0 4 893 575 286 16 64 chr15 40387587 40387774 -63107200 + B3A SINE B2 6 183 -15 4 893 622 64 0 0 chr15 40388106 40388200 -63106774 + L1_Mur1 LINE L1 3197 3290 -2596 4 893 568 227 8 8 chr15 40389089 40389209 -63105765 + ORR1E LTR MaLR 251 370 0 4 893 3360 300 65 61 chr15 40389208 40390528 -63104446 + ORR1E-int LTR MaLR 2 1326 -44 4 893 716 332 135 13 chr15 40390557 40390868 -63104106 + ORR1E LTR MaLR 11 359 0 4 893 3095 74 3 0 chr15 40391295 40391687 -63103287 + MTA_Mm LTR MaLR 4 396 0 4 893 1106 71 0 0 chr15 40392733 40392874 -63102100 + B1_Mus2 SINE Alu 2 142 -5 4 893 211 143 24 0 chr15 40392877 40392919 -63102055 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 4 893 27 49 0 0 chr15 40393820 40393861 -63101113 + AT_rich Low_complexity Low_complexity 1 41 0 4 893 1412 192 65 93 chr15 40395070 40395426 -63099548 - ORR1B1 LTR MaLR -8 386 41 4 893 414 0 0 0 chr15 40396788 40396834 -63098140 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 4 893 189 0 0 0 chr15 40397203 40397224 -63097750 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 5 893 1466 249 31 17 chr15 40397264 40397616 -63097358 - Lx6 LINE L1 -189 7271 6915 5 893 21 57 0 0 chr15 40398651 40398686 -63096288 + AT_rich Low_complexity Low_complexity 1 35 0 5 893 326 156 26 0 chr15 40399122 40399199 -63095775 + (CAGAGA)n Simple_repeat Simple_repeat 2 80 0 5 893 586 334 159 31 chr15 40400251 40400609 -63094365 + MLT1K LTR MaLR 176 579 -16 5 893 21 0 0 0 chr15 40401555 40401576 -63093398 + AT_rich Low_complexity Low_complexity 1 21 0 5 893 277 109 0 35 chr15 40401635 40401692 -63093282 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 893 3314 132 3 7 chr15 40401961 40402812 -63092162 + L1Md_F LINE L1 675 1523 -4360 5 893 468 0 0 0 chr15 40403442 40403494 -63091480 + (TTTTA)n Simple_repeat Simple_repeat 3 54 0 5 893 409 241 12 130 chr15 40403495 40403657 -63091317 - B3A SINE B2 -16 182 40 5 893 446 340 77 87 chr15 40404142 40404561 -63090413 - MLT1F2 LTR MaLR -9 560 177 5 893 1025 122 106 0 chr15 40404878 40405066 -63089908 - Lx5 LINE L1 -1132 5918 5711 5 893 2168 188 16 9 chr15 40405071 40405505 -63089469 + Lx4B LINE L1 6605 7041 -17 5 893 22 70 0 0 chr15 40405519 40405562 -63089412 + AT_rich Low_complexity Low_complexity 1 43 0 5 893 282 125 0 0 chr15 40406227 40406275 -63088699 + (CAA)n Simple_repeat Simple_repeat 1 48 0 5 893 274 349 9 36 chr15 40406317 40406427 -63088547 + Lx8 LINE L1 7169 7275 -198 5 893 206 236 0 0 chr15 40407966 40408021 -63086953 + A-rich Low_complexity Low_complexity 1 55 0 5 893 250 267 47 18 chr15 40408021 40408146 -63086828 + L1M4b LINE L1 2315 2445 -4748 5 893 227 208 0 0 chr15 40408574 40408622 -63086352 + A-rich Low_complexity Low_complexity 4 51 0 5 893 230 211 0 0 chr15 40409833 40409871 -63085103 + G-rich Low_complexity Low_complexity 1 38 0 5 893 3673 64 19 2 chr15 40410213 40410680 -63084294 - MT2C_Mm LTR ERVL 0 475 1 5 893 632 124 25 8 chr15 40411469 40411591 -63083383 - Lx3_Mus LINE L1 -870 6139 6016 5 893 420 78 25 38 chr15 40411591 40411671 -63083303 + Lx3_Mus LINE L1 6154 6232 -777 5 893 4388 60 11 2 chr15 40411674 40412245 -63082729 + Lx3_Mus LINE L1 6434 7009 0 5 893 818 332 20 13 chr15 40412696 40413030 -63081944 + Lx9 LINE L1 7072 7421 -223 5 893 375 326 46 52 chr15 40413035 40413229 -63081745 + HAL1 LINE L1 1128 1320 -1187 5 893 552 293 167 19 chr15 40413358 40413730 -63081244 - L1MC1 LINE L1 -30 6303 5877 5 893 210 147 0 0 chr15 40414696 40414730 -63080244 + (CAAAA)n Simple_repeat Simple_repeat 4 37 0 5 893 22 0 0 0 chr15 40415222 40415244 -63079730 + AT_rich Low_complexity Low_complexity 1 22 0 5 893 30 59 0 0 chr15 40415303 40415354 -63079620 + AT_rich Low_complexity Low_complexity 1 51 0 5 893 1340 38 38 0 chr15 40416490 40416650 -63078324 + L1_Mus2 LINE L1 6112 6277 -289 5 893 23 0 0 0 chr15 40416705 40416728 -63078246 + AT_rich Low_complexity Low_complexity 1 23 0 5 893 3776 60 0 67 chr15 40416939 40417476 -63077498 - L1_Mus2 LINE L1 0 6566 6066 5 893 229 175 99 12 chr15 40418121 40418202 -63076772 + Lx5 LINE L1 6962 7049 -1 5 893 249 308 156 70 chr15 40420128 40420327 -63074647 + LTR81B LTR ERV1? 255 470 -923 5 893 1218 311 131 28 chr15 40420902 40421559 -63073415 - Lx7 LINE L1 -50 7423 6690 5 893 831 229 74 40 chr15 40422911 40423234 -63071740 - Lx9 LINE L1 -69 7575 7242 5 893 233 186 70 14 chr15 40423240 40423311 -63071663 - L1M2 LINE L1 -700 5597 5523 5 893 333 0 0 0 chr15 40423327 40423364 -63071610 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 893 528 59 0 0 chr15 40423427 40423495 -63071479 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 893 520 301 24 35 chr15 40423639 40423808 -63071166 - B4A SINE B4 -124 168 2 5 893 339 296 66 7 chr15 40423869 40424005 -63070969 - L1M2 LINE L1 -2387 5398 5255 5 893 626 308 108 3 chr15 40424017 40424349 -63070625 - L1M2 LINE L1 -955 5188 4822 5 893 303 177 0 0 chr15 40424369 40424431 -63070543 + (TA)n Simple_repeat Simple_repeat 1 62 0 5 893 336 121 48 65 chr15 40424443 40424505 -63070469 + HAL1-3A_ME LINE L1 1975 2035 -823 5 893 348 268 244 29 chr15 40424919 40425227 -63069747 + L1MB5 LINE L1 5802 6175 -5 5 893 240 336 0 98 chr15 40425856 40425978 -63068996 - PB1D10 SINE Alu 0 117 8 5 893 911 285 140 7 chr15 40425983 40426290 -63068684 + ORR1E LTR MaLR 1 348 -11 5 893 1059 264 34 11 chr15 40426934 40427266 -63067708 + L1_Mur3 LINE L1 854 1192 -6536 5 893 2448 66 0 6 chr15 40427266 40427587 -63067387 + L1_Mus1 LINE L1 6249 6567 0 5 893 1059 264 34 11 chr15 40427587 40427606 -63067368 + L1_Mur3 LINE L1 1193 1213 -6515 5 893 520 189 8 16 chr15 40427786 40427910 -63067064 + L1_Mur3 LINE L1 2242 2364 -3513 5 893 1072 222 10 10 chr15 40427910 40428119 -63066855 - RLTR20A LTR ERVK 0 541 333 5 893 2762 165 57 9 chr15 40428124 40428705 -63066269 + L1_Mur3 LINE L1 3662 4270 -1607 5 893 1647 290 40 21 chr15 40428712 40429779 -63065195 + Lx5 LINE L1 6056 7044 -6 5 893 270 365 114 39 chr15 40430099 40430408 -63064566 - L2 LINE L2 -1051 2368 2044 5 893 342 0 0 0 chr15 40430408 40430446 -63064528 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 5 893 270 365 114 39 chr15 40430446 40430566 -63064408 - L2 LINE L2 -1376 2043 1916 5 893 1089 53 0 0 chr15 40430566 40430699 -63064275 + B1_Mm SINE Alu 2 134 -13 5 893 323 73 18 0 chr15 40430699 40430754 -63064220 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 5 893 270 365 114 39 chr15 40430754 40431007 -63063967 - L2 LINE L2 -1504 1915 1636 5 893 899 297 59 7 chr15 40431558 40431829 -63063145 + MTE-int LTR MaLR 63 347 -1233 5 893 254 328 90 15 chr15 40431835 40431968 -63063006 + B1F SINE Alu 1 143 -6 5 893 638 106 0 19 chr15 40431973 40432079 -63062895 + (GGGAGA)n Simple_repeat Simple_repeat 3 106 0 5 893 252 0 0 0 chr15 40432079 40432107 -63062867 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 5 893 1104 357 100 61 chr15 40432108 40433056 -63061918 + MTE-int LTR MaLR 339 1323 -257 5 893 4309 235 69 64 chr15 40433057 40434305 -63060669 - Lx7 LINE L1 -3 7693 6440 5 893 320 232 83 10 chr15 40434308 40434404 -63060570 + MTE-int LTR MaLR 1337 1439 -141 5 893 995 59 7 0 chr15 40434563 40434698 -63060276 + (TG)n Simple_repeat Simple_repeat 1 136 0 5 893 265 289 212 26 chr15 40434898 40435096 -63059878 - L1MDb LINE L1 -4577 2056 1822 5 893 23 33 0 0 chr15 40435198 40435228 -63059746 + AT_rich Low_complexity Low_complexity 1 30 0 5 893 344 259 80 15 chr15 40435406 40435543 -63059431 - L1MDb LINE L1 -5241 1299 1154 5 893 1129 221 128 15 chr15 40436070 40436406 -63058568 + ORR1D1 LTR MaLR 1 374 0 5 893 1287 340 45 40 chr15 40437191 40437859 -63057115 - MamGyp-int LTR Gypsy -1294 3768 3098 5 893 542 271 43 98 chr15 40438208 40438483 -63056491 - RLTR20D LTR ERVK -210 368 72 5 893 469 244 8 0 chr15 40439061 40439180 -63055794 - Lx7 LINE L1 -23 7673 7554 5 893 630 39 0 0 chr15 40439180 40439257 -63055717 + (TAA)n Simple_repeat Simple_repeat 2 78 0 5 893 3135 201 70 21 chr15 40439261 40439974 -63055000 - Lx7 LINE L1 -193 7503 6756 5 893 7890 43 8 3 chr15 40440545 40441600 -63053374 - L1Md_F2 LINE L1 0 6582 5520 5 893 558 337 105 37 chr15 40441608 40442095 -63052879 + LTR55 LTR ERV 10 529 -19 5 893 474 18 0 0 chr15 40442996 40443051 -63051923 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 893 261 0 0 0 chr15 40443051 40443079 -63051895 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 893 537 342 37 29 chr15 40443908 40444149 -63050825 + MLT1A0 LTR MaLR 115 357 -8 5 893 953 159 9 23 chr15 40444163 40444495 -63050479 + MTC LTR MaLR 1 421 0 5 893 596 371 42 21 chr15 40444884 40445214 -63049760 + LTR33B LTR ERVL 43 379 -124 5 893 504 331 46 52 chr15 40445219 40445544 -63049430 + MLT1B LTR MaLR 1 323 -67 5 893 266 275 0 0 chr15 40445650 40445719 -63049255 + CT-rich Low_complexity Low_complexity 2 70 0 5 893 238 355 36 72 chr15 40445782 40446086 -63048888 - Charlie25 DNA MER1_type -2177 347 55 5 893 699 277 143 13 chr15 40446654 40446892 -63048082 - B4A SINE B4 -13 279 11 5 893 422 358 85 48 chr15 40446892 40447481 -63047493 - L1M4b LINE L1 -1903 5100 4490 5 893 3194 48 5 2 chr15 40447585 40447980 -63046994 + MTA_Mm LTR MaLR 1 396 0 5 893 1295 270 33 11 chr15 40448107 40448474 -63046500 - Lx6 LINE L1 0 7460 7086 5 893 281 192 0 0 chr15 40448469 40448521 -63046453 + Lx6 LINE L1 7024 7075 -385 5 893 715 307 104 48 chr15 40448757 40449178 -63045796 - Lx9 LINE L1 -142 7502 7058 5 893 445 284 179 15 chr15 40449213 40449677 -63045297 - L1M4b LINE L1 -4205 3129 2590 5 893 291 71 0 0 chr15 40449741 40449783 -63045191 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 893 714 290 179 21 chr15 40449804 40450737 -63044237 - L1M4b LINE L1 -4901 2433 1354 5 893 1268 292 71 50 chr15 40450766 40451426 -63043548 - L1M4b LINE L1 -6050 1284 611 5 893 305 345 56 0 chr15 40451783 40451925 -63043049 - L1M4b LINE L1 -7165 169 20 5 893 2344 109 14 0 chr15 40453313 40453663 -63041311 - L1_Mus1 LINE L1 -486 5397 5043 5 893 7819 65 4 0 chr15 40453657 40454785 -63040189 + L1_Mus1 LINE L1 5436 6567 0 5 893 210 43 0 98 chr15 40454857 40454908 -63040066 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 5 893 24 32 0 0 chr15 40454920 40454951 -63040023 + AT_rich Low_complexity Low_complexity 1 31 0 5 893 561 80 0 0 chr15 40455451 40455539 -63039435 + (CA)n Simple_repeat Simple_repeat 2 89 0 5 893 331 80 0 0 chr15 40457348 40457398 -63037576 + BGLII_A LTR ERVK 1 50 -395 5 893 273 236 142 80 chr15 40457399 40457611 -63037363 - RMER3D-int LTR ERVK -2617 225 1 5 893 2401 206 88 29 chr15 40457643 40458224 -63036750 - RLTR17 LTR ERVK -77 615 1 5 893 3977 189 72 29 chr15 40458248 40459456 -63035518 + RMER3D-int LTR ERVK 1583 2842 0 5 893 998 184 60 19 chr15 40459456 40459716 -63035258 + RLTR17 LTR ERVK 1 277 -168 5 893 388 200 24 16 chr15 40459717 40459844 -63035130 + G-rich Low_complexity Low_complexity 3 130 0 5 893 1663 234 22 38 chr15 40459844 40460288 -63034686 + RLTR17 LTR ERVK 166 602 -90 5 893 1094 57 0 0 chr15 40460914 40461055 -63033919 + B1_Mus1 SINE Alu 8 148 0 5 893 297 0 0 0 chr15 40461055 40461088 -63033886 + (A)n Simple_repeat Simple_repeat 1 33 0 5 893 448 377 12 32 chr15 40461502 40461754 -63033220 + MIR SINE MIR 7 253 -9 5 893 27 0 0 0 chr15 40462170 40462197 -63032777 + AT_rich Low_complexity Low_complexity 1 27 0 5 893 615 298 29 111 chr15 40462315 40462666 -63032308 - MER2 DNA MER2_type -22 323 2 5 893 28 61 0 0 chr15 40463265 40463314 -63031660 + AT_rich Low_complexity Low_complexity 1 49 0 5 893 250 297 62 9 chr15 40465242 40465354 -63029620 - MLT1B-int LTR MaLR -639 748 631 5 893 216 0 0 0 chr15 40466382 40466406 -63028568 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 893 509 277 25 13 chr15 40466408 40466565 -63028409 - MLT1B LTR MaLR -229 161 3 5 893 205 191 0 0 chr15 40467491 40467533 -63027441 + T-rich Low_complexity Low_complexity 1 42 0 5 893 6585 53 18 2 chr15 40468492 40469321 -63025653 - L1Md_F2 LINE L1 -10 6572 5731 5 893 205 211 0 0 chr15 40470293 40470331 -63024643 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 6 893 428 328 69 19 chr15 40470401 40470662 -63024312 - B4A SINE B4 -18 274 1 6 893 7229 40 1 6 chr15 40470675 40471553 -63023421 - L1Md_F2 LINE L1 0 6582 5709 6 893 1985 45 0 0 chr15 40471550 40471792 -63023182 + L1Md_T LINE L1 4387 4628 -1255 6 893 346 89 11 0 chr15 40471792 40471848 -63023126 + L1Md_T LINE L1 5588 5647 -935 6 893 610 271 29 70 chr15 40471930 40472101 -63022873 - MTE2b LTR MaLR 0 379 216 6 893 10581 51 1 1 chr15 40472101 40474004 -63020970 + L1Md_F2 LINE L1 4561 6463 -119 6 893 392 342 48 135 chr15 40474004 40474234 -63020740 - MTE2b LTR MaLR -169 210 1 6 893 207 186 0 0 chr15 40474626 40474669 -63020305 + GA-rich Low_complexity Low_complexity 4 46 0 6 893 72 67 0 0 chr15 40475078 40475213 -63019761 + AT_rich Low_complexity Low_complexity 1 135 0 6 893 236 117 36 83 chr15 40475232 40475316 -63019658 + (TATAA)n Simple_repeat Simple_repeat 1 80 0 6 893 874 193 16 22 chr15 40475638 40475823 -63019151 + Lx9 LINE L1 7282 7465 -179 6 893 342 187 41 18 chr15 40475825 40476050 -63018924 + (TA)n Simple_repeat Simple_repeat 1 230 0 6 893 583 153 0 0 chr15 40476083 40476194 -63018780 + Lx9 LINE L1 7512 7622 -22 6 893 22 0 0 0 chr15 40476201 40476223 -63018751 + AT_rich Low_complexity Low_complexity 1 22 0 6 893 26 74 0 0 chr15 40476271 40476325 -63018649 + AT_rich Low_complexity Low_complexity 1 54 0 6 893 20517 75 3 1 chr15 40476507 40479255 -63015719 + L1Md_F2 LINE L1 2834 5586 -297 6 893 7952 33 31 0 chr15 40479255 40480207 -63014767 + L1Md_F2 LINE L1 5587 6568 -14 6 893 263 348 41 75 chr15 40480919 40481065 -63013909 - ORR1E LTR MaLR -13 366 226 6 893 343 319 44 7 chr15 40481091 40481227 -63013747 - ORR1E LTR MaLR -218 141 1 6 893 548 200 0 7 chr15 40482177 40482313 -63012661 + GA-rich Low_complexity Low_complexity 2 136 0 6 893 233 130 37 0 chr15 40483382 40483436 -63011538 + Lx LINE L1 6597 6652 -2 6 893 430 289 56 34 chr15 40483436 40483615 -63011359 - MER53 DNA hAT -10 183 1 6 893 186 250 0 0 chr15 40486714 40486770 -63008204 + CT-rich Low_complexity Low_complexity 3 58 0 6 893 23 0 0 0 chr15 40488741 40488764 -63006210 + AT_rich Low_complexity Low_complexity 1 23 0 6 893 23 0 0 0 chr15 40489005 40489028 -63005946 + AT_rich Low_complexity Low_complexity 1 23 0 6 893 234 91 0 0 chr15 40489704 40489737 -63005237 + (T)n Simple_repeat Simple_repeat 1 33 0 6 893 618 143 0 0 chr15 40490547 40490652 -63004322 + (TA)n Simple_repeat Simple_repeat 2 106 0 6 893 435 63 0 0 chr15 40491625 40491688 -63003286 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 893 31 58 0 0 chr15 40491739 40491791 -63003183 + AT_rich Low_complexity Low_complexity 1 52 0 6 893 202 220 14 64 chr15 40494787 40494928 -63000046 + (TATAA)n Simple_repeat Simple_repeat 3 136 0 6 893 207 232 0 0 chr15 40495127 40495183 -62999791 + (TA)n Simple_repeat Simple_repeat 2 57 0 6 893 24 32 0 0 chr15 40495248 40495279 -62999695 + AT_rich Low_complexity Low_complexity 1 31 0 6 893 267 152 0 0 chr15 40495799 40495845 -62999129 + (TA)n Simple_repeat Simple_repeat 1 46 0 6 893 471 243 144 0 chr15 40496330 40496388 -62998586 + RSINE1 SINE B4 8 73 -92 6 893 189 0 0 0 chr15 40496388 40496409 -62998565 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 893 471 243 144 0 chr15 40496409 40496461 -62998513 + RSINE1 SINE B4 74 133 -32 6 893 441 0 0 0 chr15 40496478 40496527 -62998447 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 6 893 29 47 0 0 chr15 40498105 40498148 -62996826 + AT_rich Low_complexity Low_complexity 1 43 0 6 893 218 220 20 0 chr15 40499087 40499137 -62995837 + (CATA)n Simple_repeat Simple_repeat 2 52 0 6 893 23 33 0 0 chr15 40499643 40499673 -62995301 + AT_rich Low_complexity Low_complexity 1 30 0 6 893 184 303 61 0 chr15 40500516 40500582 -62994392 + L2 LINE L2 2790 2859 -560 1 893 336 48 0 0 chr15 40500851 40500893 -62994081 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 111 1103 232 132 4 chr15 40500985 40501266 -62993708 - MTEa LTR MaLR -55 324 8 3 894 233 294 0 0 chr15 40502919 40502987 -62991987 + L1MC LINE L1 5706 5773 -2109 4 894 24 0 0 0 chr15 40504039 40504063 -62990911 + AT_rich Low_complexity Low_complexity 1 24 0 5 894 245 157 0 67 chr15 40504132 40504221 -62990753 + (GGCTG)n Simple_repeat Simple_repeat 5 87 0 6 894 243 0 0 0 chr15 40504524 40504551 -62990423 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 7 894 525 303 35 80 chr15 40504692 40504893 -62990081 + RMER30 DNA MER1_type 5 196 -6 8 894 333 295 104 13 chr15 40505518 40505700 -62989274 + MIR SINE MIR 33 227 -41 9 894 21 0 0 0 chr15 40506992 40507013 -62987961 + AT_rich Low_complexity Low_complexity 1 21 0 1 894 976 229 113 0 chr15 40507324 40507616 -62987358 + Lx9 LINE L1 7298 7622 -22 1 894 739 280 152 4 chr15 40509654 40509891 -62985083 - Lx6 LINE L1 -172 7288 7017 1 894 3738 93 0 8 chr15 40510372 40510900 -62984074 - L1Md_F2 LINE L1 -2032 3851 3328 1 894 12987 66 7 2 chr15 40510901 40512608 -62982366 + L1Md_F2 LINE L1 3870 5585 -298 1 894 7327 77 0 30 chr15 40512609 40513624 -62981350 + L1Md_F2 LINE L1 5587 6571 -11 1 894 21 104 0 0 chr15 40514692 40514769 -62980205 + AT_rich Low_complexity Low_complexity 1 77 0 1 894 329 194 35 52 chr15 40514948 40515122 -62979852 + (TATAA)n Simple_repeat Simple_repeat 3 173 0 1 894 364 272 0 0 chr15 40515607 40515688 -62979286 - ORR1D1 LTR MaLR -272 102 22 1 894 5232 210 79 43 chr15 40515657 40516996 -62977978 - ORR1D1-int LTR MaLR -22 1770 1 1 894 1054 239 140 3 chr15 40516996 40517324 -62977650 - ORR1D1 LTR MaLR 0 374 2 1 894 3098 143 73 23 chr15 40517852 40518469 -62976505 + RMER6A LTR ERVK 109 756 0 1 894 311 282 0 54 chr15 40520181 40520282 -62974692 - ID4_ SINE ID -53 99 6 1 894 21 0 0 0 chr15 40522175 40522196 -62972778 + AT_rich Low_complexity Low_complexity 1 21 0 1 894 22 0 0 0 chr15 40523496 40523518 -62971456 + AT_rich Low_complexity Low_complexity 1 22 0 2 894 627 14 0 0 chr15 40524341 40524413 -62970561 + (TTCC)n Simple_repeat Simple_repeat 2 73 0 2 894 423 38 0 0 chr15 40525272 40525325 -62969649 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 894 486 114 0 0 chr15 40526002 40526081 -62968893 + (TCC)n Simple_repeat Simple_repeat 3 81 0 2 894 641 226 0 21 chr15 40526086 40526226 -62968748 - B1_Mur2 SINE Alu -9 140 4 2 894 1257 280 43 27 chr15 40526283 40526724 -62968250 + Lx9 LINE L1 6991 7438 -206 2 894 458 293 74 48 chr15 40526856 40527193 -62967781 + RLTR15 LTR ERVK 1 346 -13 2 894 682 249 151 0 chr15 40527402 40527587 -62967387 - B3 SINE B2 0 216 4 2 894 210 143 0 0 chr15 40528935 40528970 -62966004 + (T)n Simple_repeat Simple_repeat 1 35 0 2 894 499 69 14 18 chr15 40529888 40529973 -62965001 + B1_Mus2 SINE Alu 47 147 0 2 894 244 113 18 36 chr15 40529976 40530031 -62964943 + A-rich Low_complexity Low_complexity 2 55 0 3 894 432 0 0 0 chr15 40530233 40530281 -62964693 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 894 2068 51 0 0 chr15 40530688 40530941 -62964033 - L1_Mus1 LINE L1 0 6567 6315 3 894 180 0 0 0 chr15 40531399 40531419 -62963555 + (T)n Simple_repeat Simple_repeat 1 20 0 3 894 225 43 42 42 chr15 40532651 40532699 -62962275 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 3 894 430 301 125 27 chr15 40533153 40533409 -62961565 + Lx8 LINE L1 7186 7466 -7 3 894 220 224 52 13 chr15 40533409 40533486 -62961488 + (CATATA)n Simple_repeat Simple_repeat 5 84 0 3 894 408 298 145 6 chr15 40539284 40539443 -62955531 + B3A SINE B2 2 182 -16 3 894 8585 113 38 8 chr15 40539459 40540960 -62954014 - Lx3C LINE L1 -2 6974 5421 3 894 4655 128 47 1 chr15 40540955 40541722 -62953252 + L1_Mur1 LINE L1 3787 4588 -1298 3 894 493 245 12 70 chr15 40541700 40541871 -62953103 - Lx6 LINE L1 -210 7250 7090 4 894 207 88 0 0 chr15 40542667 40542701 -62952273 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 4 894 219 231 0 103 chr15 40545659 40545717 -62949257 - PB1D7 SINE Alu -5 115 64 4 894 184 355 191 42 chr15 40545840 40546594 -62948380 + L2 LINE L2 2015 2880 -539 4 894 552 30 0 0 chr15 40547206 40547272 -62947702 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 894 38 51 0 0 chr15 40547887 40547946 -62947028 + AT_rich Low_complexity Low_complexity 1 59 0 4 894 41 0 0 19 chr15 40548122 40548161 -62946813 + AT_rich Low_complexity Low_complexity 1 39 0 4 894 3154 48 5 8 chr15 40548161 40548558 -62946416 + MTA_Mm LTR MaLR 1 396 0 4 894 41 0 0 19 chr15 40548558 40548570 -62946404 + AT_rich Low_complexity Low_complexity 1 12 0 4 894 29 0 0 0 chr15 40548874 40548903 -62946071 + AT_rich Low_complexity Low_complexity 1 29 0 4 894 35 41 0 0 chr15 40549043 40549092 -62945882 + AT_rich Low_complexity Low_complexity 1 49 0 5 894 2473 212 63 4 chr15 40549367 40549873 -62945101 + Lx2B LINE L1 6430 6965 -35 5 894 994 31 0 8 chr15 40549945 40550075 -62944899 + L1_Mus1 LINE L1 6439 6567 0 5 894 228 229 16 16 chr15 40550119 40550181 -62944793 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 894 405 160 0 0 chr15 40550198 40550304 -62944670 + (TA)n Simple_repeat Simple_repeat 2 107 0 5 894 343 346 98 40 chr15 40550409 40550734 -62944240 + MER90 LTR ERV1 3 346 -229 5 894 212 211 19 0 chr15 40550929 40550981 -62943993 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 894 201 289 22 22 chr15 40551198 40551290 -62943684 + (TCTCTG)n Simple_repeat Simple_repeat 5 96 0 5 894 575 218 70 64 chr15 40551629 40551721 -62943253 - RLTR20C LTR ERVK 0 578 494 5 894 315 0 0 0 chr15 40551721 40551756 -62943218 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 894 575 218 70 64 chr15 40551756 40551820 -62943154 - RLTR20C LTR ERVK -85 493 421 5 894 1249 191 82 59 chr15 40551813 40552119 -62942855 - RLTR20C LTR ERVK -221 313 1 5 894 784 295 98 44 chr15 40552279 40552693 -62942281 - Lx8 LINE L1 -39 7434 7000 5 894 2263 39 0 41 chr15 40552693 40552985 -62941989 - L1Md_F2 LINE L1 -12 6570 6291 6 894 784 295 98 44 chr15 40552985 40553020 -62941954 - Lx8 LINE L1 -474 6999 6961 5 894 384 22 0 0 chr15 40553020 40553065 -62941909 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 894 903 87 0 0 chr15 40553065 40553190 -62941784 + (GA)n Simple_repeat Simple_repeat 1 126 0 6 894 233 135 0 0 chr15 40553931 40553968 -62941006 + RLTR20C LTR ERVK 78 114 -420 6 894 343 361 69 24 chr15 40554490 40554825 -62940149 + L4 LINE RTE 1677 2026 -3 6 894 267 265 96 0 chr15 40555068 40555151 -62939823 + MIR SINE MIR 67 157 -105 6 894 594 75 0 0 chr15 40555444 40555524 -62939450 + (T)n Simple_repeat Simple_repeat 1 80 0 6 894 1183 41 0 13 chr15 40555524 40555673 -62939301 - B1_Mm SINE Alu 0 147 1 6 894 566 342 20 0 chr15 40556284 40556436 -62938538 + RSINE1 SINE B4 11 165 0 6 894 258 32 0 0 chr15 40556517 40556548 -62938426 + (CAAA)n Simple_repeat Simple_repeat 3 33 0 6 894 359 338 0 70 chr15 40556649 40556792 -62938182 + B3 SINE B2 6 138 -57 7 894 270 0 0 0 chr15 40559472 40559502 -62935472 + (TA)n Simple_repeat Simple_repeat 1 30 0 7 894 351 0 0 0 chr15 40559502 40559540 -62935434 + (GA)n Simple_repeat Simple_repeat 2 40 0 7 894 196 386 31 16 chr15 40561269 40561398 -62933576 - MIRb SINE MIR -111 157 27 7 894 221 0 0 33 chr15 40562213 40562243 -62932731 + (TTA)n Simple_repeat Simple_repeat 1 29 0 7 894 654 230 18 26 chr15 40562792 40562966 -62932008 + B3 SINE B2 7 175 -18 7 894 1127 82 0 0 chr15 40563701 40563847 -62931127 - B1_Mus2 SINE Alu -1 146 1 7 894 29 0 0 0 chr15 40563905 40563934 -62931040 + AT_rich Low_complexity Low_complexity 1 29 0 7 894 1196 283 52 8 chr15 40564303 40564688 -62930286 + MTD LTR MaLR 18 419 0 7 894 21 57 0 0 chr15 40564774 40564809 -62930165 + AT_rich Low_complexity Low_complexity 1 35 0 7 894 320 143 16 0 chr15 40565780 40565835 -62929139 + (TA)n Simple_repeat Simple_repeat 2 57 0 8 894 423 0 0 0 chr15 40565835 40565882 -62929092 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 894 320 143 16 0 chr15 40565882 40565889 -62929085 + (TA)n Simple_repeat Simple_repeat 1 7 0 8 894 353 286 66 27 chr15 40565914 40566097 -62928877 - MER3 DNA MER1_type -10 199 10 8 894 278 47 0 44 chr15 40566317 40566362 -62928612 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 8 894 201 94 0 0 chr15 40566377 40566409 -62928565 + (TG)n Simple_repeat Simple_repeat 1 32 0 8 894 752 280 71 52 chr15 40566658 40567023 -62927951 + Lx6 LINE L1 7082 7453 -7 8 894 189 107 0 0 chr15 40567889 40567917 -62927057 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 8 894 491 359 68 39 chr15 40568120 40568326 -62926648 - B4 SINE B4 0 292 81 8 894 477 248 10 0 chr15 40568365 40568478 -62926496 - B1_Mur2 SINE Alu -21 128 15 8 894 242 318 56 11 chr15 40568501 40568590 -62926384 - PB1D7 SINE Alu -26 94 2 9 894 492 59 0 0 chr15 40569193 40569261 -62925713 + (GA)n Simple_repeat Simple_repeat 1 68 0 9 894 39 38 0 0 chr15 40569599 40569652 -62925322 + AT_rich Low_complexity Low_complexity 1 53 0 9 894 445 256 29 18 chr15 40569714 40569885 -62925089 + (TA)n Simple_repeat Simple_repeat 2 174 0 9 894 21 0 0 0 chr15 40572841 40572862 -62922112 + AT_rich Low_complexity Low_complexity 1 21 0 9 894 2222 8 114 0 chr15 40573406 40573668 -62921306 + RLTR10B LTR ERVK 1 292 0 9 894 282 124 37 37 chr15 40573921 40574030 -62920944 + T-rich Low_complexity Low_complexity 1 109 0 9 894 344 351 45 34 chr15 40574508 40574685 -62920289 - MER5A DNA MER1_type -7 182 4 9 894 353 212 89 0 chr15 40575038 40575184 -62919790 - Lx9 LINE L1 -4 7640 7482 9 894 25 31 0 0 chr15 40575437 40575469 -62919505 + AT_rich Low_complexity Low_complexity 1 32 0 9 894 288 0 0 0 chr15 40575528 40575560 -62919414 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 894 297 135 0 0 chr15 40576013 40576065 -62918909 + (TAA)n Simple_repeat Simple_repeat 2 53 0 1 894 379 207 33 0 chr15 40576790 40576940 -62918034 + (CA)n Simple_repeat Simple_repeat 1 155 0 1 894 272 293 0 0 chr15 40577063 40577121 -62917853 - PB1D10 SINE Alu -2 115 58 1 894 302 296 46 56 chr15 40577169 40577282 -62917692 + Tigger7 DNA MER2_type 2294 2408 -83 1 894 332 119 0 17 chr15 40577282 40577342 -62917632 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1 894 302 296 46 56 chr15 40577342 40577425 -62917549 + Tigger7 DNA MER2_type 2409 2487 -4 1 894 429 20 0 0 chr15 40578761 40578811 -62916163 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 894 252 111 0 0 chr15 40579178 40579223 -62915751 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 1 894 601 123 19 0 chr15 40579224 40579330 -62915644 + (TG)n Simple_repeat Simple_repeat 1 108 0 1 894 235 231 0 0 chr15 40581337 40581389 -62913585 + Charlie1 DNA MER1_type 1436 1487 -1294 1 894 491 80 53 18 chr15 40583211 40583325 -62911649 + (CAGAGA)n Simple_repeat Simple_repeat 3 120 0 1 894 678 85 0 0 chr15 40584015 40584109 -62910865 + (TA)n Simple_repeat Simple_repeat 2 95 0 1 894 25 51 0 0 chr15 40584196 40584235 -62910739 + AT_rich Low_complexity Low_complexity 1 39 0 1 894 383 209 9 0 chr15 40585110 40585225 -62909749 + (CA)n Simple_repeat Simple_repeat 2 117 0 1 894 342 0 0 0 chr15 40585559 40585597 -62909377 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 894 441 192 0 0 chr15 40586963 40587083 -62907891 + CT-rich Low_complexity Low_complexity 1 120 0 1 894 1615 282 90 32 chr15 40594113 40595139 -62899835 - Lx6 LINE L1 -26 7434 6096 1 894 180 0 0 0 chr15 40596188 40596208 -62898766 + (T)n Simple_repeat Simple_repeat 1 20 0 1 894 579 311 24 42 chr15 40596505 40596643 -62898331 + RSINE1 SINE B4 1 141 -24 1 894 288 0 0 0 chr15 40596643 40596675 -62898299 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 894 579 311 24 42 chr15 40596675 40596704 -62898270 + RSINE1 SINE B4 142 165 0 1 894 519 311 6 53 chr15 40597248 40597418 -62897556 + RSINE1 SINE B4 4 165 0 1 894 1198 101 62 0 chr15 40597648 40597827 -62897147 + B2_Mm2 SINE B2 1 190 -5 1 894 965 218 14 14 chr15 40599162 40599385 -62895589 - URR1B DNA MER1_type -1 224 2 1 894 207 0 0 0 chr15 40604764 40604787 -62890187 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 894 390 91 0 0 chr15 40605316 40605371 -62889603 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 894 212 100 0 24 chr15 40605856 40605897 -62889077 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 894 28 0 0 0 chr15 40606889 40606917 -62888057 + AT_rich Low_complexity Low_complexity 1 28 0 1 894 204 149 0 0 chr15 40606998 40607045 -62887929 + (T)n Simple_repeat Simple_repeat 1 47 0 1 894 240 86 0 0 chr15 40607385 40607420 -62887554 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 894 234 0 0 0 chr15 40607775 40607801 -62887173 + (TTTTG)n Simple_repeat Simple_repeat 4 29 0 1 894 264 162 0 81 chr15 40607935 40607983 -62886991 + polypyrimidine Low_complexity Low_complexity 27 69 0 1 894 1044 146 0 0 chr15 40607983 40608161 -62886813 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1 894 264 162 0 81 chr15 40608161 40608186 -62886788 + polypyrimidine Low_complexity Low_complexity 2 26 0 1 894 459 52 0 0 chr15 40608451 40608509 -62886465 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 894 1128 64 0 0 chr15 40608967 40609108 -62885866 - B1_Mm SINE Alu -6 141 1 1 894 237 316 100 50 chr15 40609654 40609834 -62885140 + MIRb SINE MIR 38 226 -42 1 894 1010 6 30 30 chr15 40611611 40611775 -62883199 + (GGAGA)n Simple_repeat Simple_repeat 3 166 0 1 894 24 0 0 0 chr15 40612768 40612792 -62882182 + AT_rich Low_complexity Low_complexity 1 24 0 1 894 792 164 12 12 chr15 40614782 40614955 -62880019 + GA-rich Low_complexity Low_complexity 3 175 0 1 894 216 200 0 0 chr15 40615053 40615098 -62879876 + T-rich Low_complexity Low_complexity 1 45 0 1 894 3620 88 4 6 chr15 40615138 40615630 -62879344 - L1_Mus1 LINE L1 -1 6566 6076 1 894 1566 210 93 6 chr15 40616660 40617005 -62877969 - ORR1C1 LTR MaLR 0 378 4 1 894 239 283 0 0 chr15 40617197 40617257 -62877717 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 894 303 146 0 0 chr15 40617260 40617308 -62877666 - HAL1-3A_ME LINE L1 -849 2009 1962 1 894 1087 259 72 55 chr15 40617308 40617615 -62877359 - MTE2b LTR MaLR -10 369 58 1 894 273 268 42 0 chr15 40617623 40617694 -62877280 - MTE2b LTR MaLR -301 78 5 1 894 512 299 44 15 chr15 40617739 40617875 -62877099 - B1F SINE Alu -1 148 9 1 894 504 347 14 0 chr15 40619418 40619562 -62875412 + B3A SINE B2 5 150 -48 1 894 693 45 0 0 chr15 40620966 40621055 -62873919 + (GA)n Simple_repeat Simple_repeat 2 90 0 1 894 22 0 0 0 chr15 40621949 40621971 -62873003 + AT_rich Low_complexity Low_complexity 1 22 0 1 894 21 71 0 0 chr15 40622055 40622097 -62872877 + AT_rich Low_complexity Low_complexity 1 42 0 1 894 224 213 33 0 chr15 40622331 40622392 -62872582 + T-rich Low_complexity Low_complexity 3 65 0 1 894 405 0 0 0 chr15 40624938 40624983 -62869991 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 894 603 273 0 0 chr15 40625000 40625128 -62869846 - RSINE1 SINE B4 -35 130 3 1 894 224 299 83 64 chr15 40625810 40626048 -62868926 + MIRb SINE MIR 28 265 -3 1 894 30 69 0 0 chr15 40626162 40626220 -62868754 + AT_rich Low_complexity Low_complexity 1 58 0 1 894 184 211 192 26 chr15 40627416 40627494 -62867480 + L4 LINE RTE 1367 1457 -572 1 894 213 128 26 0 chr15 40628951 40628990 -62865984 + GA-rich Low_complexity Low_complexity 2 41 0 1 894 225 292 0 110 chr15 40628990 40629090 -62865884 - MLT1F2 LTR MaLR -339 221 133 1 895 459 0 0 0 chr15 40632378 40632429 -62862545 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 895 366 250 0 12 chr15 40632606 40632691 -62862283 + B3 SINE B2 2 85 -131 1 895 21 57 0 0 chr15 40633956 40633991 -62860983 + AT_rich Low_complexity Low_complexity 1 35 0 1 895 285 360 75 29 chr15 40634193 40634433 -62860541 - MLT1B LTR MaLR -130 260 10 1 895 29 47 0 0 chr15 40635703 40635746 -62859228 + AT_rich Low_complexity Low_complexity 1 43 0 1 895 22 0 0 0 chr15 40635888 40635910 -62859064 + AT_rich Low_complexity Low_complexity 1 22 0 1 895 505 264 71 0 chr15 40636255 40636395 -62858579 + B3 SINE B2 67 216 0 1 895 410 96 14 0 chr15 40637967 40638040 -62856934 + (CA)n Simple_repeat Simple_repeat 2 75 0 1 895 266 366 59 7 chr15 40638664 40638799 -62856175 - MLT1J LTR MaLR -368 144 3 1 895 23 0 0 0 chr15 40639373 40639396 -62855578 + AT_rich Low_complexity Low_complexity 1 23 0 1 895 816 289 108 18 chr15 40639557 40639899 -62855075 + Lx8 LINE L1 7095 7467 -6 1 895 372 174 10 42 chr15 40640404 40640500 -62854474 - Lx6 LINE L1 -6 7454 7362 1 895 6247 60 0 8 chr15 40640715 40641520 -62853454 + L1Md_F2 LINE L1 5784 6582 0 1 895 270 0 0 0 chr15 40642353 40642383 -62852591 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 895 306 0 0 0 chr15 40643579 40643613 -62851361 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 895 329 328 103 23 chr15 40645196 40645371 -62849603 + MER5A DNA MER1_type 1 189 0 1 895 360 319 63 7 chr15 40645380 40645522 -62849452 - MER58D DNA MER1_type -1 385 236 1 895 22 70 0 0 chr15 40645572 40645615 -62849359 + AT_rich Low_complexity Low_complexity 1 43 0 1 895 22 0 0 0 chr15 40646195 40646217 -62848757 + AT_rich Low_complexity Low_complexity 1 22 0 1 895 213 94 0 0 chr15 40646286 40646318 -62848656 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1 895 528 324 83 7 chr15 40646323 40646731 -62848243 - L1MC4a LINE L1 -104 7778 7340 1 895 484 204 0 10 chr15 40649023 40649122 -62845852 + Lx3A LINE L1 6776 6873 -108 1 895 192 125 0 0 chr15 40649133 40649165 -62845809 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 1 895 335 200 20 20 chr15 40649848 40649950 -62845024 + Lx9 LINE L1 7543 7644 0 1 895 22 70 0 0 chr15 40650026 40650069 -62844905 + AT_rich Low_complexity Low_complexity 1 43 0 1 895 423 38 0 0 chr15 40650242 40650295 -62844679 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 895 666 261 24 81 chr15 40650467 40650713 -62844261 - Lx9 LINE L1 -8 7636 7405 1 895 513 269 22 29 chr15 40651371 40651509 -62843465 + L3 LINE CR1 3102 3238 -1251 1 895 236 341 8 16 chr15 40651509 40651637 -62843337 + CR1_Mam LINE CR1 1152 1278 -926 1 895 238 224 29 29 chr15 40652082 40652151 -62842823 + CT-rich Low_complexity Low_complexity 1 69 0 1 895 288 130 0 0 chr15 40652165 40652211 -62842763 + (TCC)n Simple_repeat Simple_repeat 3 48 0 1 895 415 336 9 0 chr15 40652228 40652338 -62842636 - PB1D10 SINE Alu -6 111 1 1 895 334 352 0 19 chr15 40652243 40652350 -62842624 - ID_B1 SINE B4 -48 176 72 1 895 223 186 0 0 chr15 40653887 40653930 -62841044 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1 895 23 0 0 0 chr15 40654732 40654755 -62840219 + AT_rich Low_complexity Low_complexity 1 23 0 1 895 189 0 0 0 chr15 40656374 40656395 -62838579 + (TCC)n Simple_repeat Simple_repeat 3 23 0 1 895 33 43 0 0 chr15 40657114 40657161 -62837813 + AT_rich Low_complexity Low_complexity 1 47 0 1 895 258 32 0 0 chr15 40658304 40658335 -62836639 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 895 552 163 0 0 chr15 40658335 40658464 -62836510 + GA-rich Low_complexity Low_complexity 1 129 0 1 895 249 324 9 27 chr15 40660106 40660217 -62834757 + MIR SINE MIR 146 254 -8 1 895 1191 108 34 10 chr15 40660314 40660520 -62834454 - L1_Mus3 LINE L1 -6 6632 6422 1 895 1124 68 0 20 chr15 40660548 40660688 -62834286 + B1_Mus1 SINE Alu 1 140 -8 1 895 219 88 0 0 chr15 40660688 40660722 -62834252 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 2 895 1026 263 88 10 chr15 40662682 40662978 -62831996 + MTE2b LTR MaLR 58 376 -3 2 895 204 40 0 0 chr15 40663357 40663382 -62831592 + (A)n Simple_repeat Simple_repeat 1 25 0 2 895 21 0 0 0 chr15 40663643 40663664 -62831310 + AT_rich Low_complexity Low_complexity 1 21 0 2 895 531 0 0 0 chr15 40663724 40663783 -62831191 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 895 282 159 54 68 chr15 40663878 40663952 -62831022 - L1MA9 LINE L1 -121 6191 6119 2 895 989 192 108 0 chr15 40665051 40665254 -62829720 + URR1B DNA MER1_type 1 225 0 2 895 837 263 74 57 chr15 40665541 40665908 -62829066 - MTE2a LTR MaLR -2 377 5 2 895 198 181 7 0 chr15 40666047 40666088 -62828886 - MIRc SINE MIR -113 163 119 2 895 4004 86 13 0 chr15 40667902 40668447 -62826527 - L1_Mus4 LINE L1 0 6636 6085 2 895 1119 80 68 0 chr15 40668452 40668615 -62826359 + L1_Mus4 LINE L1 5922 6095 -541 2 895 210 207 0 0 chr15 40669095 40669153 -62825821 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 895 288 0 0 0 chr15 40672002 40672034 -62822940 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 2 895 702 0 0 0 chr15 40672334 40672412 -62822562 + (TTTC)n Simple_repeat Simple_repeat 4 81 0 2 895 3627 91 2 17 chr15 40672526 40673050 -62821924 + L1Md_F2 LINE L1 6067 6582 0 2 895 352 123 27 0 chr15 40673543 40673616 -62821358 + (TA)n Simple_repeat Simple_repeat 1 75 0 2 895 789 266 21 16 chr15 40673785 40673976 -62820998 - B3A SINE B2 -6 192 1 2 895 25 51 0 0 chr15 40674524 40674563 -62820411 + AT_rich Low_complexity Low_complexity 1 39 0 2 895 669 302 30 59 chr15 40674758 40675029 -62819945 - MLT1B LTR MaLR -32 358 96 2 895 550 348 57 85 chr15 40675032 40675384 -62819590 + ORR1E LTR MaLR 12 353 -6 2 895 201 39 0 0 chr15 40675738 40675764 -62819210 + (A)n Simple_repeat Simple_repeat 1 26 0 2 895 228 284 147 0 chr15 40676183 40676278 -62818696 - MLT1B LTR MaLR -6 368 260 2 895 1587 37 5 0 chr15 40676314 40676503 -62818471 - B2_Mm1t SINE B2 -2 191 2 2 895 270 160 0 0 chr15 40676559 40676609 -62818365 + (CAGA)n Simple_repeat Simple_repeat 3 52 0 2 895 2054 137 6 35 chr15 40676652 40677000 -62817974 - ORR1A1 LTR MaLR -8 338 1 2 895 277 285 136 15 chr15 40677002 40677134 -62817840 - MLT1B LTR MaLR -207 183 36 2 895 912 147 4 11 chr15 40677625 40677895 -62817079 + CT-rich Low_complexity Low_complexity 1 267 0 2 895 486 320 20 23 chr15 40677908 40678069 -62816905 - ID_B1 SINE B4 -48 244 84 2 895 424 337 110 70 chr15 40678077 40678523 -62816451 - MLT1C LTR MaLR 0 467 4 2 895 309 26 0 0 chr15 40680818 40680856 -62814118 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 895 191 152 22 0 chr15 40682708 40682754 -62812220 + T-rich Low_complexity Low_complexity 3 49 0 2 895 378 38 0 0 chr15 40685103 40685156 -62809818 + L1Md_T LINE L1 6529 6581 -1 2 895 201 121 0 0 chr15 40685588 40685621 -62809353 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2 895 416 337 70 33 chr15 40685727 40685942 -62809032 - B4A SINE B4 -6 286 64 2 895 200 338 43 14 chr15 40687150 40687219 -62807755 - MIRb SINE MIR -154 114 44 2 895 24 106 0 0 chr15 40687699 40687793 -62807181 + AT_rich Low_complexity Low_complexity 1 94 0 2 895 248 212 195 0 chr15 40688035 40688153 -62806821 - MamRep434 DNA TcMar -194 232 92 2 895 251 196 52 26 chr15 40688211 40688326 -62806648 + (TA)n Simple_repeat Simple_repeat 1 118 0 2 895 27 62 0 0 chr15 40688439 40688487 -62806487 + AT_rich Low_complexity Low_complexity 1 48 0 2 895 1083 297 36 61 chr15 40689832 40690191 -62804783 - ORR1E LTR MaLR -5 354 5 2 895 1806 333 51 35 chr15 40690170 40690366 -62804608 - ORR1E-int LTR MaLR -28 1552 1354 2 895 486 0 0 0 chr15 40690366 40690420 -62804554 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 2 895 435 52 0 0 chr15 40690427 40690485 -62804489 + (CATA)n Simple_repeat Simple_repeat 4 61 0 2 895 1806 333 51 35 chr15 40690485 40691030 -62803944 - ORR1E-int LTR MaLR -232 1348 791 2 895 1530 216 48 36 chr15 40691083 40691476 -62803498 - RLTR11A2 LTR ERVK -129 398 1 2 895 387 204 9 18 chr15 40692545 40692655 -62802319 - Lx5 LINE L1 0 7050 6942 2 895 207 167 0 0 chr15 40693191 40693227 -62801747 + CT-rich Low_complexity Low_complexity 1 36 0 2 895 340 206 0 64 chr15 40693330 40693408 -62801566 + ID4 SINE ID 7 79 -4 2 895 292 277 83 74 chr15 40693408 40693451 -62801523 + ID_B1 SINE B4 7 128 -96 2 895 588 235 9 9 chr15 40693715 40693831 -62801143 + B1F SINE Alu 3 118 -31 2 895 620 94 0 9 chr15 40693841 40693948 -62801026 + (GA)n Simple_repeat Simple_repeat 1 106 0 2 895 21 36 0 0 chr15 40695114 40695142 -62799832 + AT_rich Low_complexity Low_complexity 1 28 0 2 895 180 0 0 0 chr15 40695704 40695724 -62799250 + (TTTTG)n Simple_repeat Simple_repeat 4 23 0 2 895 984 208 45 36 chr15 40696517 40696741 -62798233 + URR1A DNA MER1_type 1 226 0 2 895 28 0 0 0 chr15 40700606 40700634 -62794340 + AT_rich Low_complexity Low_complexity 1 28 0 2 895 24 32 0 0 chr15 40700761 40700792 -62794182 + AT_rich Low_complexity Low_complexity 1 31 0 2 895 465 355 36 41 chr15 40704740 40705043 -62789931 - MLT2C1 LTR ERVL -12 385 86 2 895 8384 86 2 0 chr15 40705067 40706401 -62788573 - L1_Mus1 LINE L1 -530 6037 4700 2 895 4309 53 2 0 chr15 40706401 40706931 -62788043 + L1_Mus1 LINE L1 6035 6565 -2 2 895 763 242 74 16 chr15 40708404 40708593 -62786381 + B3 SINE B2 17 216 0 2 895 244 273 30 0 chr15 40708708 40708774 -62786200 + L2c LINE L2 3317 3384 -3 2 895 213 94 0 0 chr15 40710032 40710064 -62784910 + (T)n Simple_repeat Simple_repeat 1 32 0 2 895 3171 45 0 5 chr15 40710076 40710473 -62784501 - L1Md_F2 LINE L1 -5 6577 6183 2 895 36434 51 12 4 chr15 40710952 40716429 -62778545 + L1Md_T LINE L1 99 5586 -297 2 895 8000 57 0 0 chr15 40716429 40717447 -62777527 + L1Md_T LINE L1 5587 6582 0 2 895 1515 20 0 61 chr15 40717447 40717740 -62777234 + L1Md_F2 LINE L1 6382 6582 0 2 895 189 0 0 0 chr15 40719068 40719089 -62775885 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 895 303 392 8 60 chr15 40719097 40719230 -62775744 - ID_B1 SINE B4 -20 204 79 2 895 7284 10 0 0 chr15 40719785 40720611 -62774363 - L1Md_A LINE L1 -585 5298 4473 2 895 2585 7 0 0 chr15 40720608 40720896 -62774078 + L1Md_A LINE L1 5299 5586 -297 2 895 8891 10 0 0 chr15 40720896 40721892 -62773082 + L1Md_A LINE L1 5587 6582 0 2 895 446 340 26 13 chr15 40722685 40722837 -62772137 - RSINE1 SINE B4 -8 157 4 2 895 484 170 44 6 chr15 40723155 40723315 -62771659 + (TA)n Simple_repeat Simple_repeat 1 166 0 2 895 592 315 167 28 chr15 40723490 40723879 -62771095 - MLT1F2 LTR MaLR -117 443 1 2 895 600 319 12 6 chr15 40724173 40724334 -62770640 + B3 SINE B2 1 162 -54 2 895 207 69 0 0 chr15 40724334 40724363 -62770611 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 895 414 318 21 85 chr15 40724363 40724390 -62770584 + B2_Mm2 SINE B2 152 177 -18 2 895 180 316 152 37 chr15 40724513 40724730 -62770244 + MIRc SINE MIR 20 261 -7 2 895 2789 73 50 50 chr15 40725158 40725574 -62769400 - L1_Mus2 LINE L1 -1 6565 6150 2 895 4256 68 2 1 chr15 40725574 40726326 -62768648 + L1_Mus2 LINE L1 5372 6123 -443 2 895 307 292 90 23 chr15 40726689 40726822 -62768152 - HAL1-3A_ME LINE L1 -734 2124 1983 2 895 218 96 39 78 chr15 40726870 40726972 -62768002 + (TTTG)n Simple_repeat Simple_repeat 2 99 0 2 895 1022 48 0 93 chr15 40726983 40727114 -62767860 - B1_Mus1 SINE Alu -1 147 18 2 895 1752 59 0 0 chr15 40727114 40727389 -62767585 + L1_Mus1 LINE L1 6341 6567 0 2 895 1022 48 0 93 chr15 40727389 40727418 -62767556 - B1_Mus1 SINE Alu -131 17 2 2 895 181 182 36 0 chr15 40728329 40728384 -62766590 + CT-rich Low_complexity Low_complexity 5 61 0 2 895 3509 70 11 4 chr15 40729193 40729667 -62765307 - L1_Mus3 LINE L1 -6 6632 6156 2 895 662 202 59 55 chr15 40729668 40729981 -62764993 + L1Md_F LINE L1 570 724 -5795 2 895 297 211 172 60 chr15 40731047 40731163 -62763811 + B3 SINE B2 8 136 -80 2 895 273 119 0 0 chr15 40731163 40731205 -62763769 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 895 286 375 18 36 chr15 40731205 40731257 -62763717 + B3A SINE B2 139 190 -8 2 895 653 307 76 21 chr15 40731414 40731703 -62763271 + MER2 DNA MER2_type 40 344 -1 2 895 213 245 0 0 chr15 40732364 40732413 -62762561 + A-rich Low_complexity Low_complexity 1 49 0 2 895 351 0 0 0 chr15 40733136 40733175 -62761799 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 2 895 471 220 11 11 chr15 40736041 40736133 -62758841 + MER20 DNA MER1_type 1 92 -127 2 895 282 345 61 31 chr15 40736687 40736970 -62758004 - MER2 DNA MER2_type -30 315 10 2 895 303 28 0 0 chr15 40738666 40738702 -62756272 + (TAA)n Simple_repeat Simple_repeat 1 36 0 2 895 551 323 40 0 chr15 40739272 40739470 -62755504 - MER20 DNA MER1_type -7 212 7 2 895 257 290 54 30 chr15 40740427 40740594 -62754380 - RMER17D LTR ERVK -337 552 382 2 895 26 0 0 0 chr15 40740820 40740846 -62754128 + AT_rich Low_complexity Low_complexity 1 26 0 2 895 3812 107 0 47 chr15 40740877 40741475 -62753499 + L1_Mus4 LINE L1 6067 6636 0 2 895 297 0 0 0 chr15 40741608 40741641 -62753333 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 895 441 0 0 0 chr15 40741641 40741689 -62753285 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 895 235 233 68 0 chr15 40742186 40742259 -62752715 + Lx8 LINE L1 7091 7168 -305 2 895 23 0 0 0 chr15 40744751 40744774 -62750200 + AT_rich Low_complexity Low_complexity 1 23 0 2 895 486 0 0 0 chr15 40745288 40745342 -62749632 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 895 441 0 0 0 chr15 40745888 40745937 -62749037 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 895 441 36 0 0 chr15 40745937 40745991 -62748983 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 895 217 132 0 0 chr15 40746044 40746082 -62748892 + (A)n Simple_repeat Simple_repeat 1 38 0 2 895 276 53 0 0 chr15 40746102 40746140 -62748834 + (A)n Simple_repeat Simple_repeat 1 38 0 2 895 202 286 71 0 chr15 40747160 40747230 -62747744 - L2c LINE L2 -77 3310 3236 2 895 263 250 17 0 chr15 40747562 40747622 -62747352 + MTEa LTR MaLR 3 63 -316 3 895 502 307 111 128 chr15 40747627 40747971 -62747003 + MTEa LTR MaLR 40 377 -2 3 895 597 238 16 0 chr15 40748639 40748761 -62746213 + RSINE1 SINE B4 20 143 -22 3 895 1512 282 50 70 chr15 40749393 40749977 -62744997 - Lx5 LINE L1 0 7050 6479 3 895 396 0 0 0 chr15 40749988 40750032 -62744942 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 895 2105 241 31 38 chr15 40750070 40750705 -62744269 - Lx6 LINE L1 -1187 6273 5643 3 895 22 35 0 0 chr15 40750705 40750734 -62744240 + AT_rich Low_complexity Low_complexity 1 29 0 3 895 7945 26 8 42 chr15 40750734 40751711 -62743263 - L1Md_A LINE L1 -3 6579 5608 3 895 347 42 0 0 chr15 40751711 40751759 -62743215 - B1_Mus2 SINE Alu -21 126 79 3 895 7945 26 8 42 chr15 40751759 40752168 -62742806 - L1Md_A LINE L1 -3 5607 5199 3 895 391 333 28 0 chr15 40752608 40752716 -62742258 - PB1D10 SINE Alu 0 117 7 3 895 467 234 42 10 chr15 40752732 40752862 -62742112 + B1F1 SINE Alu 7 147 -2 3 895 256 278 12 153 chr15 40752871 40752956 -62742018 + ID4 SINE ID 2 74 -9 3 895 606 162 0 0 chr15 40752969 40753105 -62741869 + (CA)n Simple_repeat Simple_repeat 1 136 0 3 895 198 0 0 0 chr15 40753385 40753407 -62741567 + (T)n Simple_repeat Simple_repeat 1 22 0 3 895 208 154 0 37 chr15 40754197 40754220 -62740754 + C-rich Low_complexity Low_complexity 33 55 0 3 895 432 51 0 0 chr15 40754220 40754279 -62740695 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 3 895 208 154 0 37 chr15 40754279 40754309 -62740665 + C-rich Low_complexity Low_complexity 4 32 0 3 895 333 0 0 0 chr15 40755031 40755068 -62739906 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 895 229 239 0 0 chr15 40755578 40755624 -62739350 + T-rich Low_complexity Low_complexity 1 46 0 3 895 387 0 0 0 chr15 40756660 40756703 -62738271 + (GA)n Simple_repeat Simple_repeat 1 43 0 3 895 187 320 40 0 chr15 40757449 40757524 -62737450 + MIRb SINE MIR 184 261 -7 3 895 266 0 29 0 chr15 40759425 40759459 -62735515 + (CAA)n Simple_repeat Simple_repeat 2 36 0 3 895 297 362 193 20 chr15 40760049 40760551 -62734423 + L2 LINE L2 2478 3066 -353 3 895 769 320 103 9 chr15 40760689 40760890 -62734084 + B4A SINE B4 2 225 -67 3 895 1114 106 0 16 chr15 40760890 40761073 -62733901 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 895 769 320 103 9 chr15 40761073 40761095 -62733879 + B4A SINE B4 226 246 -46 3 895 414 57 0 0 chr15 40761190 40761243 -62733731 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 895 333 358 0 42 chr15 40763150 40763293 -62731681 + RSINE1 SINE B4 22 158 -7 3 895 273 57 0 0 chr15 40763301 40763336 -62731638 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 896 293 0 0 26 chr15 40764851 40764889 -62730085 + (TTA)n Simple_repeat Simple_repeat 3 39 0 3 896 257 341 145 21 chr15 40765114 40765300 -62729674 - LFSINE_Vert SINE SINE -56 403 195 3 896 269 362 9 0 chr15 40765809 40765914 -62729060 + PB1D10 SINE Alu 5 110 -7 3 896 327 49 0 0 chr15 40765943 40765984 -62728990 + (CAGGA)n Simple_repeat Simple_repeat 3 43 0 3 896 589 317 29 10 chr15 40767145 40767352 -62727622 + ID_B1 SINE B4 12 222 -2 3 896 212 111 61 82 chr15 40767309 40767358 -62727616 + PB1D7 SINE Alu 73 120 0 3 896 185 231 0 25 chr15 40767838 40767918 -62727056 + GA-rich Low_complexity Low_complexity 2 79 0 3 896 832 165 0 17 chr15 40767946 40768089 -62726885 + GA-rich Low_complexity Low_complexity 2 142 0 3 896 1212 72 0 22 chr15 40768089 40768273 -62726701 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 3 896 832 165 0 17 chr15 40768273 40768308 -62726666 + polypurine Low_complexity Low_complexity 143 177 0 3 896 3964 80 0 0 chr15 40768534 40769058 -62725916 + L1Md_T LINE L1 6059 6582 0 3 896 22 0 0 0 chr15 40771960 40771982 -62722992 + AT_rich Low_complexity Low_complexity 1 22 0 3 896 649 284 14 14 chr15 40774000 40774211 -62720763 - B3 SINE B2 -5 211 1 3 896 313 246 0 15 chr15 40774371 40774437 -62720537 + MTE2b LTR MaLR 1 65 -314 3 896 302 292 191 8 chr15 40775356 40775487 -62719487 + HAL1-3A_ME LINE L1 2284 2438 -420 3 896 215 200 0 0 chr15 40775487 40775540 -62719434 + polypurine Low_complexity Low_complexity 1 53 0 3 896 542 232 64 6 chr15 40776109 40776265 -62718709 - Lx5 LINE L1 -3 7047 6883 3 896 24 0 0 0 chr15 40776375 40776399 -62718575 + AT_rich Low_complexity Low_complexity 1 24 0 3 896 383 316 58 11 chr15 40776423 40776612 -62718362 + Lx8 LINE L1 6898 7095 -378 3 896 405 0 0 0 chr15 40776937 40776982 -62717992 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 896 247 236 218 0 chr15 40777521 40777635 -62717339 - MIR3 SINE MIR -25 183 38 3 896 260 65 0 42 chr15 40778634 40778682 -62716292 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 3 896 195 42 0 0 chr15 40778885 40778909 -62716065 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 896 288 0 0 0 chr15 40779296 40779328 -62715646 + (A)n Simple_repeat Simple_repeat 1 32 0 3 896 1055 124 0 6 chr15 40780782 40780960 -62714014 + (TTC)n Simple_repeat Simple_repeat 3 179 0 3 896 21 36 0 0 chr15 40781179 40781207 -62713767 + AT_rich Low_complexity Low_complexity 1 28 0 3 896 843 64 0 0 chr15 40781773 40781883 -62713091 + (GGAA)n Simple_repeat Simple_repeat 3 112 0 3 896 339 289 112 88 chr15 40782165 40782242 -62712732 - MLT1D LTR MaLR -207 298 218 3 896 498 248 98 0 chr15 40782242 40782375 -62712599 - B1F SINE Alu -2 147 2 3 896 339 289 112 88 chr15 40782375 40782582 -62712392 - MLT1D LTR MaLR -288 217 7 3 896 1104 184 68 0 chr15 40783686 40783892 -62711082 + URR1A DNA MER1_type 7 226 0 3 896 410 212 17 103 chr15 40784067 40784084 -62710890 + MT2B LTR ERVL 150 255 -346 3 896 545 184 30 10 chr15 40784084 40784183 -62710791 + B1_Mus1 SINE Alu 1 101 -47 3 896 333 0 0 0 chr15 40784183 40784220 -62710754 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 3 896 306 0 0 0 chr15 40784551 40784585 -62710389 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 896 21 0 0 0 chr15 40786151 40786172 -62708802 + AT_rich Low_complexity Low_complexity 1 21 0 3 896 21 36 0 0 chr15 40787816 40787844 -62707130 + AT_rich Low_complexity Low_complexity 1 28 0 3 896 606 63 0 0 chr15 40788276 40788355 -62706619 + (GGAA)n Simple_repeat Simple_repeat 1 79 0 3 896 277 364 57 24 chr15 40788745 40788869 -62706105 - MIRb SINE MIR -139 129 2 3 896 716 142 8 41 chr15 40789323 40789565 -62705409 + (TCTCTG)n Simple_repeat Simple_repeat 1 234 0 3 896 225 262 23 23 chr15 40789587 40789673 -62705301 + (TG)n Simple_repeat Simple_repeat 1 86 0 3 896 21 0 0 0 chr15 40790233 40790254 -62704720 + AT_rich Low_complexity Low_complexity 1 21 0 3 896 189 0 0 0 chr15 40791265 40791286 -62703688 + (A)n Simple_repeat Simple_repeat 1 21 0 3 896 265 276 38 38 chr15 40791542 40791621 -62703353 - RSINE1 SINE B4 0 165 87 3 896 193 317 105 22 chr15 40791693 40791834 -62703140 - MIRb SINE MIR 0 262 112 3 896 260 53 0 26 chr15 40794149 40794188 -62700786 + (TTCA)n Simple_repeat Simple_repeat 2 39 0 3 896 875 277 101 14 chr15 40795217 40795565 -62699409 - MTEa LTR MaLR -1 378 1 3 896 546 295 39 11 chr15 40795933 40796111 -62698863 + MER58A DNA MER1_type 26 208 -16 3 896 777 22 0 0 chr15 40796450 40796541 -62698433 + (TC)n Simple_repeat Simple_repeat 1 91 0 3 896 297 0 0 0 chr15 40796541 40796573 -62698401 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 896 765 226 11 11 chr15 40796586 40796765 -62698209 - B2_Mm2 SINE B2 -9 186 8 3 896 21 0 0 0 chr15 40796771 40796792 -62698182 + AT_rich Low_complexity Low_complexity 1 21 0 3 896 264 30 0 0 chr15 40797331 40797364 -62697610 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 3 896 6586 62 0 7 chr15 40797366 40798219 -62696755 - L1Md_F2 LINE L1 -6 6576 5730 3 896 295 276 27 45 chr15 40798229 40798339 -62696635 - RMER1C Other Other -3 1339 1232 3 896 522 296 156 36 chr15 40798274 40798576 -62696398 - Lx8 LINE L1 -30 7443 7106 3 896 249 122 0 0 chr15 40799425 40799474 -62695500 - Lx9 LINE L1 -16 7628 7580 3 896 180 0 0 0 chr15 40800851 40800871 -62694103 + (T)n Simple_repeat Simple_repeat 1 20 0 3 896 482 157 33 0 chr15 40800962 40801083 -62693891 + GA-rich Low_complexity Low_complexity 1 125 0 3 896 2638 297 115 33 chr15 40801234 40802422 -62692552 - Lx8 LINE L1 -10 7463 6178 3 896 30 0 0 0 chr15 40802470 40802500 -62692474 + AT_rich Low_complexity Low_complexity 1 30 0 3 896 194 128 0 25 chr15 40802601 40802641 -62692333 + (TATG)n Simple_repeat Simple_repeat 4 42 0 3 896 650 318 62 22 chr15 40802659 40802884 -62692090 - B4A SINE B4 -55 237 4 3 896 228 163 0 0 chr15 40803877 40803920 -62691054 + GA-rich Low_complexity Low_complexity 2 44 0 3 896 21 36 0 0 chr15 40805037 40805065 -62689909 + AT_rich Low_complexity Low_complexity 1 28 0 3 896 252 59 0 0 chr15 40806576 40806610 -62688364 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 896 1133 55 7 27 chr15 40809332 40809482 -62685492 + B1_Mus1 SINE Alu 1 147 -1 3 896 221 271 13 67 chr15 40811799 40811874 -62683100 - L2a LINE L2 -13 3413 3343 3 896 615 296 112 36 chr15 40812302 40812694 -62682280 - Charlie1 DNA MER1_type -358 2423 2002 3 896 28 29 0 0 chr15 40812702 40812737 -62682237 + AT_rich Low_complexity Low_complexity 1 35 0 3 896 351 0 0 0 chr15 40812822 40812861 -62682113 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 896 1039 306 14 11 chr15 40812902 40813249 -62681725 - Lx9 LINE L1 -245 7399 7052 3 896 650 297 107 11 chr15 40813328 40813600 -62681374 + Lx9 LINE L1 6750 7047 -597 3 896 498 258 197 28 chr15 40813999 40814255 -62680719 - Lx7 LINE L1 -280 7416 7118 3 896 313 152 38 12 chr15 40814285 40814365 -62680609 + Lx7 LINE L1 7615 7696 0 3 896 2140 314 80 56 chr15 40814504 40815453 -62679521 + Charlie1a DNA MER1_type 42 995 -460 4 896 1196 41 0 0 chr15 40815453 40815600 -62679374 + B1_Mm SINE Alu 1 147 0 4 896 2140 314 80 56 chr15 40815600 40816008 -62678966 + Charlie1a DNA MER1_type 996 1431 -24 4 896 185 151 0 19 chr15 40816856 40816910 -62678064 + (TTTAA)n Simple_repeat Simple_repeat 4 56 0 4 896 336 204 11 0 chr15 40818483 40818571 -62676403 + Lx9 LINE L1 7508 7596 -48 4 896 189 0 0 0 chr15 40819008 40819029 -62675945 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 4 896 761 150 18 30 chr15 40819030 40819195 -62675779 - RMER17B LTR ERVK -497 461 299 4 896 794 222 61 20 chr15 40819973 40820171 -62674803 - B3 SINE B2 -1 215 10 4 896 294 214 0 0 chr15 40820427 40820516 -62674458 + (TG)n Simple_repeat Simple_repeat 2 90 0 4 896 1530 169 67 0 chr15 40820545 40820829 -62674145 + RMER1B Other Other 649 951 -115 4 896 235 287 92 34 chr15 40821689 40821808 -62673166 + MIRc SINE MIR 87 212 -56 4 896 300 83 0 0 chr15 40823345 40823393 -62671581 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 4 896 498 75 0 0 chr15 40825172 40825239 -62669735 + (TA)n Simple_repeat Simple_repeat 2 68 0 4 896 201 388 10 20 chr15 40826087 40826187 -62668787 + MIR SINE MIR 50 148 -114 4 896 238 204 37 0 chr15 40826717 40826771 -62668203 - PB1D9 SINE Alu -62 58 3 4 896 386 20 20 0 chr15 40827190 40827241 -62667733 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 896 322 265 87 10 chr15 40828371 40828474 -62666500 - PB1D7 SINE Alu -7 113 3 4 896 597 57 28 19 chr15 40828615 40828723 -62666251 - L1Md_F2 LINE L1 0 6582 6474 4 896 296 371 21 14 chr15 40828996 40829141 -62665833 + MER3 DNA MER1_type 1 146 -63 4 896 755 291 106 55 chr15 40829725 40829998 -62664976 + B4A SINE B4 6 292 0 4 896 1834 200 101 5 chr15 40830145 40830522 -62664452 + MTC LTR MaLR 1 413 -8 4 896 272 345 82 58 chr15 40831297 40831503 -62663471 + MLT1J1 LTR MaLR 233 443 -1 4 896 24 0 0 0 chr15 40832427 40832451 -62662523 + AT_rich Low_complexity Low_complexity 1 24 0 4 896 643 87 0 10 chr15 40832580 40832684 -62662290 - L1_Mus2 LINE L1 0 6566 6464 4 896 611 320 7 48 chr15 40832737 40833026 -62661948 + B4A SINE B4 5 281 -11 4 896 193 268 113 0 chr15 40834257 40834328 -62660646 - MIRb SINE MIR -69 199 121 4 896 455 288 192 13 chr15 40834550 40834779 -62660195 + LTR87 LTR ERVL? 275 544 -80 4 896 432 0 0 0 chr15 40835043 40835091 -62659883 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 896 183 304 0 0 chr15 40835302 40835348 -62659626 + L2a LINE L2 3346 3391 -35 4 896 23 78 0 0 chr15 40835764 40835815 -62659159 + AT_rich Low_complexity Low_complexity 1 51 0 4 896 426 323 8 0 chr15 40837383 40837510 -62657464 + B1F SINE Alu 1 128 -21 4 896 200 227 0 0 chr15 40837659 40837703 -62657271 + (TAA)n Simple_repeat Simple_repeat 3 46 0 4 896 643 239 0 0 chr15 40838213 40838343 -62656631 + Lx6 LINE L1 6988 7117 -343 4 896 24 53 0 0 chr15 40838489 40838527 -62656447 + AT_rich Low_complexity Low_complexity 1 38 0 4 896 4704 216 54 19 chr15 40838594 40839317 -62655657 - Lx5 LINE L1 -3 7047 6306 4 896 3226 51 2 5 chr15 40839317 40839714 -62655260 - MTA_Mm LTR MaLR 0 396 1 4 896 4704 216 54 19 chr15 40839714 40840050 -62654924 - Lx5 LINE L1 -745 6305 5951 4 896 694 340 83 56 chr15 40840188 40840692 -62654282 - Lx8 LINE L1 0 7473 6956 4 896 1429 256 42 2 chr15 40842033 40842433 -62652541 - Lx9 LINE L1 -318 7326 6911 4 896 1070 201 101 0 chr15 40842426 40842704 -62652270 + Lx9 LINE L1 7338 7643 -1 4 896 513 44 0 0 chr15 40844138 40844206 -62650768 + (TG)n Simple_repeat Simple_repeat 1 68 0 4 896 392 265 24 0 chr15 40844253 40844336 -62650638 - B3A SINE B2 -111 87 3 4 896 27 29 0 0 chr15 40847415 40847449 -62647525 + AT_rich Low_complexity Low_complexity 1 34 0 4 896 227 103 0 25 chr15 40848373 40848413 -62646561 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 4 896 25 0 0 0 chr15 40849323 40849348 -62645626 + AT_rich Low_complexity Low_complexity 1 25 0 4 896 598 198 12 0 chr15 40849670 40849837 -62645137 + (TG)n Simple_repeat Simple_repeat 2 170 0 4 896 534 351 24 35 chr15 40849899 40850153 -62644821 - B4A SINE B4 -34 258 8 4 896 407 140 0 20 chr15 40850399 40850501 -62644473 + (TCTCTG)n Simple_repeat Simple_repeat 3 102 0 4 896 278 67 0 22 chr15 40850502 40850548 -62644426 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 896 244 286 14 0 chr15 40850629 40850699 -62644275 + (TATG)n Simple_repeat Simple_repeat 2 72 0 4 896 912 269 76 49 chr15 40852306 40852673 -62642301 + MTE2b LTR MaLR 3 379 0 4 896 546 218 0 0 chr15 40852820 40852976 -62641998 + (TG)n Simple_repeat Simple_repeat 2 157 0 4 896 218 294 189 25 chr15 40852979 40853101 -62641873 - MIR SINE MIR -110 152 11 4 896 225 185 37 0 chr15 40853877 40853931 -62641043 - Charlie10a DNA MER1_type -110 170 115 4 896 303 161 0 0 chr15 40854785 40854841 -62640133 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 896 475 313 14 7 chr15 40854891 40855039 -62639935 - RSINE1 SINE B4 -15 150 2 4 896 232 301 125 10 chr15 40855506 40855610 -62639364 - PB1 SINE Alu -4 123 8 4 896 481 294 29 83 chr15 40855674 40855878 -62639096 + ID_B1 SINE B4 13 205 -19 4 896 884 233 39 10 chr15 40856122 40856330 -62638644 - B3 SINE B2 -2 214 1 4 896 270 377 141 32 chr15 40856858 40857135 -62637839 - MLT1I LTR MaLR -69 342 36 4 896 186 43 0 0 chr15 40857679 40857702 -62637272 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 896 273 57 0 0 chr15 40858128 40858163 -62636811 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 896 294 95 0 0 chr15 40858163 40858205 -62636769 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 896 903 304 117 74 chr15 40858283 40859071 -62635903 + MER63C DNA AcHobo 94 915 -15 4 896 305 322 40 32 chr15 40859197 40859322 -62635652 + MER5A DNA MER1_type 7 132 -57 4 896 34 24 0 0 chr15 40859362 40859403 -62635571 + AT_rich Low_complexity Low_complexity 1 41 0 4 896 255 298 93 37 chr15 40860790 40860898 -62634076 - ID_B1 SINE B4 0 224 111 4 896 248 383 37 16 chr15 40862658 40862849 -62632125 + MIRb SINE MIR 31 225 -43 4 896 268 278 21 32 chr15 40863574 40863667 -62631307 - Charlie2a DNA MER1_type -1197 1664 1573 4 896 549 0 0 0 chr15 40863816 40863877 -62631097 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 4 896 390 300 152 11 chr15 40864385 40864668 -62630306 + MER33 DNA MER1_type 2 324 0 4 896 293 277 104 47 chr15 40864982 40865194 -62629780 - L1M6 LINE L1 -5140 1356 1133 4 896 486 0 0 0 chr15 40865296 40865350 -62629624 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 896 247 351 79 26 chr15 40867203 40867393 -62627581 - L2c LINE L2 -180 3207 3008 4 896 564 89 0 0 chr15 40868260 40868339 -62626635 + (GGGA)n Simple_repeat Simple_repeat 2 80 0 4 896 315 324 102 14 chr15 40870685 40870832 -62624142 + RSINE1 SINE B4 2 161 -4 4 896 354 108 0 0 chr15 40870849 40870914 -62624060 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 896 216 171 0 0 chr15 40871008 40871049 -62623925 + (CAGA)n Simple_repeat Simple_repeat 4 44 0 4 896 22 0 0 0 chr15 40871059 40871081 -62623893 + AT_rich Low_complexity Low_complexity 1 22 0 4 896 293 68 23 0 chr15 40871085 40871129 -62623845 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 896 23 68 0 0 chr15 40872376 40872420 -62622554 + AT_rich Low_complexity Low_complexity 1 44 0 4 896 1900 284 64 21 chr15 40873855 40874554 -62620420 + Lx8 LINE L1 6739 7467 -6 4 896 1077 78 14 0 chr15 40875191 40875333 -62619641 + B1_Mus1 SINE Alu 1 144 -4 4 896 241 47 0 44 chr15 40875636 40875681 -62619293 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 896 467 256 102 66 chr15 40875953 40876150 -62618824 - B3 SINE B2 -12 204 1 4 896 1091 82 0 7 chr15 40877555 40877702 -62617272 + B1_Mus1 SINE Alu 3 148 0 4 896 1216 46 8 25 chr15 40878552 40878801 -62616173 + (GAAA)n Simple_repeat Simple_repeat 1 244 0 4 896 1047 117 0 16 chr15 40878817 40878915 -62616059 + (GGAA)n Simple_repeat Simple_repeat 1 97 0 4 896 1114 58 11 28 chr15 40878915 40879094 -62615880 + (GAAA)n Simple_repeat Simple_repeat 4 179 0 4 896 1047 117 0 16 chr15 40879094 40879178 -62615796 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 4 896 408 374 112 43 chr15 40881697 40882365 -62612609 - L2 LINE L2 -2239 1180 467 4 896 331 321 18 0 chr15 40882428 40882540 -62612434 - PB1D7 SINE Alu -2 118 5 4 896 1150 362 86 86 chr15 40882554 40884040 -62610934 - MTE-int LTR MaLR -40 1540 54 4 896 268 242 14 57 chr15 40885175 40885245 -62609729 + ID4_ SINE ID 13 79 -4 4 896 234 128 0 0 chr15 40885343 40885382 -62609592 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 896 321 226 0 0 chr15 40887149 40887233 -62607741 + (TTG)n Simple_repeat Simple_repeat 2 85 0 4 896 348 339 0 18 chr15 40888374 40888488 -62606486 + GA-rich Low_complexity Low_complexity 3 114 0 4 896 306 0 0 0 chr15 40888652 40888686 -62606288 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 896 236 311 38 63 chr15 40891908 40891987 -62602987 + PB1D10 SINE Alu 28 104 -13 4 896 287 78 20 0 chr15 40891987 40892038 -62602936 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 4 896 231 154 0 0 chr15 40892046 40892085 -62602889 - 5S rRNA rRNA -81 40 2 4 896 5218 45 6 1 chr15 40892085 40892731 -62602243 + L1_Mus3 LINE L1 5987 6635 -3 4 896 528 16 0 0 chr15 40892761 40892822 -62602152 + (GGGA)n Simple_repeat Simple_repeat 4 64 0 4 896 815 90 11 38 chr15 40893770 40893954 -62601020 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 896 296 167 14 0 chr15 40893997 40894069 -62600905 + (TG)n Simple_repeat Simple_repeat 1 73 0 5 897 405 0 0 0 chr15 40896824 40896869 -62598105 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 897 229 346 19 0 chr15 40897419 40897523 -62597451 - L2b LINE L2 0 3375 3270 5 897 261 83 0 0 chr15 40898167 40898203 -62596771 + (CAGG)n Simple_repeat Simple_repeat 1 36 0 5 897 294 287 101 9 chr15 40898228 40898337 -62596637 - RSINE1 SINE B4 -35 130 12 5 897 315 0 0 0 chr15 40899211 40899246 -62595728 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 897 502 262 24 92 chr15 40899265 40899418 -62595556 - B4A SINE B4 0 292 151 5 897 582 189 0 0 chr15 40899418 40899513 -62595461 + URR1B DNA MER1_type 1 95 -130 5 897 422 320 24 16 chr15 40899543 40899670 -62595304 - B4A SINE B4 -159 133 6 5 897 302 139 0 0 chr15 40900654 40900697 -62594277 - HAL1-3A_ME LINE L1 -846 2012 1970 5 897 217 266 54 155 chr15 40901680 40901809 -62593165 + B3A SINE B2 1 116 -82 5 897 32 26 0 0 chr15 40902466 40902505 -62592469 + AT_rich Low_complexity Low_complexity 1 39 0 5 897 270 0 0 0 chr15 40902640 40902670 -62592304 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 897 630 0 0 0 chr15 40906428 40906498 -62588476 + (TC)n Simple_repeat Simple_repeat 1 70 0 5 897 403 212 192 62 chr15 40906498 40906644 -62588330 - B4A SINE B4 -1 291 127 5 897 930 164 0 0 chr15 40906648 40906794 -62588180 + (TCTCTG)n Simple_repeat Simple_repeat 5 150 0 5 897 357 298 26 11 chr15 40906794 40906929 -62588045 - B4A SINE B4 -148 144 3 5 897 243 0 0 0 chr15 40908388 40908415 -62586559 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 5 897 204 154 0 0 chr15 40908653 40908705 -62586269 + T-rich Low_complexity Low_complexity 4 55 0 5 897 212 203 34 0 chr15 40909246 40909305 -62585669 + (CATATA)n Simple_repeat Simple_repeat 6 66 0 5 897 963 218 19 19 chr15 40911744 40911959 -62583015 + B3 SINE B2 2 216 0 5 897 1211 77 60 22 chr15 40912110 40912295 -62582679 + B2_Mm2 SINE B2 2 193 -2 5 897 21 0 0 0 chr15 40913660 40913681 -62581293 + AT_rich Low_complexity Low_complexity 1 21 0 5 897 1149 186 62 4 chr15 40914427 40914654 -62580320 + Lx5 LINE L1 6808 7047 -3 5 897 783 73 24 0 chr15 40914920 40915044 -62579930 + (GA)n Simple_repeat Simple_repeat 2 128 0 5 897 516 206 0 0 chr15 40917370 40917511 -62577463 + (TG)n Simple_repeat Simple_repeat 2 142 0 5 897 309 239 0 0 chr15 40917531 40917648 -62577326 + (TG)n Simple_repeat Simple_repeat 1 117 0 5 897 221 185 18 36 chr15 40917650 40917706 -62577268 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 5 897 404 249 0 6 chr15 40917711 40917877 -62577097 + (TG)n Simple_repeat Simple_repeat 2 166 0 5 897 1333 76 43 0 chr15 40918070 40918255 -62576719 + B2_Mm1t SINE B2 1 193 0 5 897 837 132 0 0 chr15 40918269 40918390 -62576584 + B3 SINE B2 3 123 -93 5 897 265 380 0 12 chr15 40920339 40920419 -62574555 - MER5A DNA MER1_type -36 153 75 5 897 658 301 102 22 chr15 40922025 40922486 -62572488 - L1MB2 LINE L1 -21 6150 5653 5 897 493 158 67 29 chr15 40923215 40923319 -62571655 - B1_Mur1 SINE Alu 0 149 42 5 897 609 204 0 0 chr15 40923325 40923457 -62571517 + CT-rich Low_complexity Low_complexity 1 132 0 5 897 3070 132 10 8 chr15 40923457 40923962 -62571012 - Lx3B LINE L1 -1 6972 6467 5 897 461 127 0 0 chr15 40923962 40924033 -62570941 + Lx3B LINE L1 6382 6452 -521 5 897 284 324 29 10 chr15 40924253 40924356 -62570618 + MIRc SINE MIR 29 133 -135 5 897 663 144 0 0 chr15 40924457 40924568 -62570406 + (TTG)n Simple_repeat Simple_repeat 3 113 0 5 897 489 34 0 0 chr15 40927922 40927981 -62566993 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 897 423 0 0 0 chr15 40928239 40928286 -62566688 + (TTA)n Simple_repeat Simple_repeat 3 49 0 5 897 800 200 102 11 chr15 40929731 40929918 -62565056 + URR1B DNA MER1_type 22 225 0 5 897 384 189 24 8 chr15 40931112 40931235 -62563739 + (CATA)n Simple_repeat Simple_repeat 4 128 0 5 897 25 75 0 0 chr15 40931733 40931786 -62563188 + AT_rich Low_complexity Low_complexity 1 53 0 5 897 219 114 0 0 chr15 40931787 40931822 -62563152 + (TTTAG)n Simple_repeat Simple_repeat 4 38 0 5 897 301 226 0 0 chr15 40931838 40931891 -62563083 - B1_Mur2 SINE Alu -34 115 63 5 897 278 333 31 10 chr15 40931971 40932068 -62562906 + MamRep1894 DNA hAT 24 122 -1 5 897 35 54 0 0 chr15 40932202 40932258 -62562716 + AT_rich Low_complexity Low_complexity 1 56 0 5 897 22 0 0 0 chr15 40935319 40935341 -62559633 + AT_rich Low_complexity Low_complexity 1 22 0 5 897 22 35 0 0 chr15 40935368 40935397 -62559577 + AT_rich Low_complexity Low_complexity 1 29 0 5 897 513 131 0 0 chr15 40938481 40938565 -62556409 + (TA)n Simple_repeat Simple_repeat 2 85 0 5 897 289 351 78 46 chr15 40939417 40939635 -62555339 - MLT1D LTR MaLR -280 225 1 5 897 624 268 130 12 chr15 40939894 40940140 -62554834 + MamRep434 DNA TcMar 14 288 -138 5 897 203 191 46 35 chr15 40940240 40940327 -62554647 + (CATATA)n Simple_repeat Simple_repeat 1 88 0 5 897 2190 310 56 24 chr15 40941239 40941928 -62553046 - Lx8 LINE L1 -132 7341 6644 5 897 3624 35 2 0 chr15 40941928 40942361 -62552613 + L1Md_F2 LINE L1 6149 6582 0 5 897 2190 310 56 24 chr15 40942361 40942606 -62552368 - Lx8 LINE L1 -830 6643 6377 5 897 1023 264 19 4 chr15 40944822 40945092 -62549882 + Lx8 LINE L1 7047 7320 -153 5 897 256 278 45 71 chr15 40946437 40946592 -62548382 + RLTR21 LTR ERVK 1090 1240 -332 5 897 286 340 19 19 chr15 40947190 40947298 -62547676 + LFSINE_Vert SINE SINE 292 399 -60 5 897 721 235 53 68 chr15 40948469 40948734 -62546240 - MER112 DNA MER1_type 0 261 1 5 897 681 278 50 10 chr15 40949224 40949413 -62545561 - B3A SINE B2 -19 197 4 5 897 448 257 44 26 chr15 40950450 40950605 -62544369 - B3A SINE B2 -16 182 15 5 897 817 213 34 34 chr15 40952600 40952804 -62542170 + MTD LTR MaLR 211 414 -5 5 897 204 175 0 24 chr15 40952867 40952908 -62542066 + (TTA)n Simple_repeat Simple_repeat 2 41 0 5 897 243 0 0 0 chr15 40952937 40952964 -62542010 + (T)n Simple_repeat Simple_repeat 1 27 0 5 897 282 242 55 23 chr15 40952975 40953104 -62541870 - Lx3A LINE L1 -415 5885 5721 5 897 346 279 70 35 chr15 40953198 40953369 -62541605 - Lx3A LINE L1 -678 5622 5446 5 897 360 0 0 0 chr15 40953481 40953521 -62541453 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 897 760 261 16 109 chr15 40953542 40953864 -62541110 - B4 SINE B4 0 292 1 5 897 760 199 0 58 chr15 40954096 40954251 -62540723 + B1_Mur3 SINE Alu 2 147 -2 5 897 384 200 0 0 chr15 40954287 40954367 -62540607 + GA-rich Low_complexity Low_complexity 4 83 0 5 897 1433 33 0 5 chr15 40954394 40954605 -62540369 + (GGAAA)n Simple_repeat Simple_repeat 1 210 0 5 897 186 380 101 0 chr15 40955173 40955252 -62539722 + L2c LINE L2 3113 3199 -188 5 897 24 32 0 0 chr15 40956061 40956092 -62538882 + AT_rich Low_complexity Low_complexity 1 31 0 5 897 282 56 0 0 chr15 40956203 40956239 -62538735 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 897 3211 48 2 5 chr15 40956670 40957067 -62537907 - MTA_Mm LTR MaLR 0 396 1 5 897 399 137 0 0 chr15 40957477 40957550 -62537424 + (TG)n Simple_repeat Simple_repeat 2 74 0 5 897 221 163 20 0 chr15 40957558 40957607 -62537367 + GA-rich Low_complexity Low_complexity 1 50 0 5 897 23 54 0 0 chr15 40957668 40957705 -62537269 + AT_rich Low_complexity Low_complexity 1 37 0 5 897 288 0 0 0 chr15 40958334 40958366 -62536608 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 897 207 361 16 25 chr15 40958967 40959089 -62535885 - MIR SINE MIR -57 205 85 5 897 418 305 46 0 chr15 40959433 40959564 -62535410 - Lx8 LINE L1 -153 7320 7184 5 897 309 239 43 7 chr15 40959625 40959764 -62535210 + L1M3 LINE L1 4288 4431 -1709 5 897 1651 238 124 23 chr15 40959977 40960451 -62534523 + RMER15 LTR ERVL 27 548 -27 5 897 1260 68 0 0 chr15 40961704 40961865 -62533109 - L1_Mus2 LINE L1 -1 6565 6405 5 897 855 164 0 14 chr15 40962484 40962626 -62532348 + RLTR41 LTR ERV1 307 446 0 5 897 922 311 32 91 chr15 40964119 40964491 -62530483 + MTE2b LTR MaLR 1 350 -29 5 897 455 296 53 95 chr15 40964498 40964523 -62530451 - B2_Mm2 SINE B2 -10 185 162 5 897 606 28 0 0 chr15 40964523 40964595 -62530379 + (TG)n Simple_repeat Simple_repeat 2 73 0 5 897 664 281 31 8 chr15 40964595 40964759 -62530215 - B3 SINE B2 -48 168 4 5 897 23 33 0 0 chr15 40966053 40966083 -62528891 + AT_rich Low_complexity Low_complexity 1 30 0 5 897 486 0 0 0 chr15 40966213 40966267 -62528707 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 897 328 306 14 7 chr15 40966446 40966594 -62528380 + (AATTG)n Simple_repeat Simple_repeat 4 152 0 5 897 564 29 0 0 chr15 40967948 40968018 -62526956 + (TC)n Simple_repeat Simple_repeat 2 71 0 5 897 234 0 0 0 chr15 40968019 40968045 -62526929 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 897 578 14 14 0 chr15 40968815 40968886 -62526088 + (TA)n Simple_repeat Simple_repeat 1 72 0 5 897 630 256 182 22 chr15 40969752 40970159 -62524815 + RMER5 LTR ERV1 43 514 -20 5 897 339 148 16 16 chr15 40970339 40970401 -62524573 + HAL1-3A_ME LINE L1 1951 2012 -846 5 897 180 0 0 0 chr15 40970455 40970475 -62524499 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 897 214 162 0 0 chr15 40970754 40970791 -62524183 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 897 330 336 18 0 chr15 40971420 40971530 -62523444 - MIRc SINE MIR -104 164 53 5 897 266 275 141 11 chr15 40971932 40972024 -62522950 + B1F SINE Alu 2 105 -44 5 897 636 282 48 26 chr15 40972380 40972609 -62522365 - MTE2a LTR MaLR 0 379 146 5 897 1660 150 42 68 chr15 40972585 40973036 -62521938 + RMER17C LTR ERVK 16 441 -517 5 897 1235 97 6 17 chr15 40973769 40973947 -62521027 + B2_Mm2 SINE B2 1 176 -19 5 897 254 330 67 59 chr15 40974641 40974760 -62520214 - MLT1D LTR MaLR -102 403 284 6 897 3485 33 0 0 chr15 40974870 40975266 -62519708 - MTA_Mm LTR MaLR 0 396 1 6 897 799 257 86 31 chr15 40975319 40975576 -62519398 - ORR1E LTR MaLR -4 355 85 6 897 4199 53 6 0 chr15 40975597 40976124 -62518850 + L1Md_F2 LINE L1 6048 6577 -5 6 897 21 0 0 0 chr15 40976125 40976146 -62518828 + AT_rich Low_complexity Low_complexity 1 21 0 6 897 317 282 0 96 chr15 40976146 40976240 -62518734 - ORR1E LTR MaLR -283 87 3 6 897 31154 81 13 1 chr15 40976355 40981459 -62513515 + L1Md_F2 LINE L1 364 5586 -297 6 897 6557 70 85 2 chr15 40981459 40982305 -62512669 + L1Md_F2 LINE L1 5587 6481 -101 6 897 204 40 0 0 chr15 40982305 40982330 -62512644 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 6 897 6557 70 85 2 chr15 40982330 40982391 -62512583 + L1Md_F2 LINE L1 6482 6567 -15 6 897 1101 105 0 0 chr15 40982391 40982553 -62512421 + (GGAA)n Simple_repeat Simple_repeat 3 164 0 6 897 408 303 35 60 chr15 40982579 40982728 -62512246 + MLT2C1 LTR ERVL 203 342 -55 6 897 1068 98 0 2 chr15 40982728 40983184 -62511790 + (TG)n Simple_repeat Simple_repeat 1 454 0 6 897 408 303 35 60 chr15 40983184 40983226 -62511748 + MLT2C1 LTR ERVL 343 388 -9 6 897 492 292 67 0 chr15 40983301 40983479 -62511495 - Lx8 LINE L1 -706 6767 6578 6 897 590 228 34 28 chr15 40983495 40983671 -62511303 + Lx9 LINE L1 6935 7111 -533 6 897 305 300 45 0 chr15 40984120 40984230 -62510744 + L1MC LINE L1 5655 5769 -2113 6 897 371 333 62 0 chr15 40984755 40984947 -62510027 - Lx8 LINE L1 -354 7119 6916 6 897 237 139 0 0 chr15 40985039 40985082 -62509892 + (GA)n Simple_repeat Simple_repeat 1 43 0 6 897 390 396 12 12 chr15 40985358 40985519 -62509455 - Tigger5 DNA MER2_type -2168 238 78 6 897 516 77 0 0 chr15 40985526 40985604 -62509370 + (TG)n Simple_repeat Simple_repeat 2 79 0 6 897 398 258 11 0 chr15 40985623 40985712 -62509262 - 5S rRNA rRNA -31 90 1 6 897 396 0 0 0 chr15 40985836 40985880 -62509094 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 897 180 0 0 0 chr15 40985880 40985900 -62509074 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 897 459 73 0 0 chr15 40985900 40985968 -62509006 + (GA)n Simple_repeat Simple_repeat 1 68 0 6 897 29 0 0 0 chr15 40986488 40986517 -62508457 + AT_rich Low_complexity Low_complexity 1 29 0 6 897 1168 274 29 69 chr15 40987409 40987786 -62507188 - MTE2b LTR MaLR 0 379 18 6 897 369 0 0 0 chr15 40987934 40987975 -62506999 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 897 1107 79 6 11 chr15 40989632 40989684 -62505290 + (GAA)n Simple_repeat Simple_repeat 3 54 0 6 897 1536 22 0 0 chr15 40989684 40989864 -62505110 + (GGA)n Simple_repeat Simple_repeat 1 180 0 6 897 1107 79 6 11 chr15 40989864 40989990 -62504984 + (GAA)n Simple_repeat Simple_repeat 1 126 0 6 897 321 89 0 0 chr15 40990003 40990048 -62504926 + (GGA)n Simple_repeat Simple_repeat 2 46 0 6 897 1870 177 65 30 chr15 40990198 40990684 -62504290 + RLTR41 LTR ERV1 6 445 -1 6 897 461 283 89 137 chr15 40990943 40991110 -62503864 + L1MD LINE L1 4874 5033 -1113 6 897 2618 41 9 0 chr15 40991110 40991428 -62503546 - L1Md_F2 LINE L1 -4 6578 6258 6 897 461 283 89 137 chr15 40991428 40991781 -62503193 + L1MD LINE L1 5034 5368 -778 6 897 521 264 137 12 chr15 40991781 40991942 -62503032 + B3A SINE B2 2 182 -16 6 897 461 283 89 137 chr15 40991942 40991961 -62503013 + L1MD LINE L1 5369 5387 -759 6 897 28 29 0 0 chr15 40992138 40992173 -62502801 + AT_rich Low_complexity Low_complexity 1 35 0 6 897 2217 60 0 0 chr15 40992241 40992516 -62502458 + L1_Mm LINE L1 5312 5586 -297 6 897 8221 40 1 9 chr15 40992516 40993520 -62501454 + L1Md_F2 LINE L1 5587 6582 0 6 897 843 196 119 10 chr15 40994645 40994846 -62500128 + URR1B DNA MER1_type 2 224 -1 6 897 2053 126 38 154 chr15 40995622 40996127 -62498847 + RLTR41 LTR ERV1 1 446 0 6 897 186 71 0 0 chr15 40997114 40997142 -62497832 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 6 897 2230 179 18 5 chr15 40997145 40997539 -62497435 + MTD LTR MaLR 19 417 -2 6 897 249 320 130 76 chr15 40997925 40998003 -62496971 + LTR50 LTR ERVL 194 285 -510 6 897 1382 82 6 0 chr15 40998003 40998186 -62496788 - B2_Mm1t SINE B2 -7 186 3 6 897 249 320 130 76 chr15 40998186 40998330 -62496644 + LTR50 LTR ERVL 286 428 -367 6 897 638 323 10 36 chr15 40998486 40998679 -62496295 - B3 SINE B2 -28 188 1 6 897 268 340 64 76 chr15 40998706 40998942 -62496032 + MLT1B LTR MaLR 6 238 -152 6 897 543 140 24 3 chr15 40999721 40999829 -62495145 + ORR1B1 LTR MaLR 1 140 -254 6 897 1047 140 58 0 chr15 40999829 41000000 -62494974 - RMER19B LTR ERVK 0 902 722 6 897 1831 189 86 17 chr15 41000011 41000371 -62494603 - RMER19B LTR ERVK -177 725 341 1 897 1072 222 41 68 chr15 41000412 41000707 -62494267 + RLTR20B3 LTR ERVK 1 287 -290 2 897 1599 238 64 28 chr15 41000700 41001101 -62493873 - RLTR20D LTR ERVK -134 434 51 3 897 201 39 0 0 chr15 41001107 41001133 -62493841 + (TAAAAA)n Simple_repeat Simple_repeat 2 27 0 4 897 787 138 0 8 chr15 41001207 41001331 -62493643 + ORR1B1 LTR MaLR 272 394 0 5 897 449 280 8 99 chr15 41001331 41001462 -62493512 + RSINE1 SINE B4 47 165 0 6 897 300 103 190 13 chr15 41001720 41001799 -62493175 - Lx9 LINE L1 -6 7638 7546 7 897 2838 158 17 11 chr15 41002632 41003105 -62491869 - RLTR25A LTR ERVK -627 476 1 8 897 1632 256 56 31 chr15 41003256 41003809 -62491165 + MYSERV16_I-int LTR ERVK 91 657 -1669 9 897 1956 223 146 30 chr15 41003819 41004532 -62490442 + MYSERV-int LTR ERVK 5753 6548 -2 1 897 2548 211 18 2 chr15 41004535 41005030 -62489944 + RLTR11A2 LTR ERVK 3 505 -22 1 897 221 125 78 59 chr15 41006507 41006558 -62488416 + MIRm SINE MIR 117 168 -108 1 897 603 242 102 0 chr15 41006595 41006752 -62488222 + B4A SINE B4 58 230 -62 1 897 568 289 12 76 chr15 41007040 41007212 -62487762 - B3 SINE B2 -8 208 48 1 897 335 319 67 37 chr15 41007724 41007988 -62486986 + RMER15 LTR ERVL 275 572 -3 1 897 242 257 0 0 chr15 41008625 41008695 -62486279 + GA-rich Low_complexity Low_complexity 1 70 0 1 897 1478 319 44 10 chr15 41008965 41009580 -62485394 + RMER15-int LTR ERVL 647 1282 -3717 1 897 289 257 24 14 chr15 41010279 41010376 -62484598 - Lx8 LINE L1 -490 6983 6881 1 897 738 184 7 7 chr15 41010385 41010521 -62484453 - RLTR11A LTR ERVK -1 527 392 1 897 6051 114 48 19 chr15 41010521 41011036 -62483938 + RLTR13C1 LTR ERVK 1 522 -461 1 897 4379 126 25 70 chr15 41011036 41011883 -62483091 - RMER17D2 LTR ERVK 0 809 1 1 897 6051 114 48 19 chr15 41011883 41012322 -62482652 + RLTR13C1 LTR ERVK 523 983 0 1 897 1808 164 141 0 chr15 41012322 41012670 -62482304 - RLTR11A LTR ERVK -131 397 1 1 897 409 291 47 57 chr15 41012670 41012863 -62482111 - Lx8 LINE L1 -585 6888 6698 1 897 641 328 23 0 chr15 41012904 41013160 -62481814 + Lx8 LINE L1 7037 7298 -175 2 897 6902 227 45 23 chr15 41013648 41016784 -62478190 - Lx6 LINE L1 -3 7457 4254 2 897 2565 114 121 18 chr15 41016784 41017221 -62477753 - RLTR45 LTR ERVK 0 482 1 2 897 6902 211 41 18 chr15 41017221 41017271 -62477703 - Lx6 LINE L1 -1627 4253 4193 2 897 405 0 0 0 chr15 41017271 41017316 -62477658 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 897 6902 211 41 18 chr15 41017316 41017372 -62477602 - Lx6 LINE L1 -1688 4192 4137 2 897 2230 175 171 7 chr15 41017379 41017942 -62477032 + Lx6 LINE L1 3466 4120 -1760 2 897 3353 121 29 27 chr15 41017944 41018506 -62476468 + RLTR25A LTR ERVK 520 1082 -21 2 897 360 64 0 0 chr15 41019443 41019490 -62475484 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 897 790 289 90 0 chr15 41019528 41019784 -62475190 - B4A SINE B4 -12 280 2 2 897 287 346 90 75 chr15 41020156 41020473 -62474501 + MLT1A1 LTR MaLR 2 328 -37 2 897 303 317 114 30 chr15 41020473 41020639 -62474335 + B3A SINE B2 2 181 -17 2 897 2283 154 40 135 chr15 41020639 41020653 -62474321 + RLTR28 LTR ERVL 1 14 -510 2 897 2270 143 40 151 chr15 41020653 41021155 -62473819 - RLTR41 LTR ERV1 0 446 1 3 897 2283 154 40 135 chr15 41021155 41021719 -62473255 + RLTR28 LTR ERVL 15 524 0 2 897 24 32 0 0 chr15 41021728 41021759 -62473215 + AT_rich Low_complexity Low_complexity 1 31 0 3 897 957 227 90 146 chr15 41022091 41022217 -62472757 - RLTR9E LTR ERVK -31 389 301 3 897 1507 47 11 5 chr15 41022217 41022408 -62472566 - B2_Mm1t SINE B2 -1 192 1 3 897 1850 102 29 12 chr15 41022408 41022693 -62472281 - RLTR9E LTR ERVK -120 300 1 3 897 186 71 0 0 chr15 41023174 41023202 -62471772 + (A)n Simple_repeat Simple_repeat 1 28 0 3 897 275 294 75 21 chr15 41024392 41024486 -62470488 + PB1D7 SINE Alu 1 99 -21 3 897 555 56 0 0 chr15 41024489 41024560 -62470414 + (TC)n Simple_repeat Simple_repeat 2 72 0 3 897 652 68 0 19 chr15 41024766 41024871 -62470103 + (TTTTA)n Simple_repeat Simple_repeat 2 104 0 3 112 1174 280 55 17 chr15 41025454 41025858 -62469116 + MTD LTR MaLR 1 419 0 3 898 4226 214 26 85 chr15 41026002 41026852 -62468122 + Lx7 LINE L1 6508 7357 -339 3 898 279 0 0 0 chr15 41026852 41026883 -62468091 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 898 4226 214 26 85 chr15 41026883 41026914 -62468060 + Lx7 LINE L1 7358 7381 -315 3 898 333 0 0 0 chr15 41026914 41026951 -62468023 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 898 2494 156 86 30 chr15 41026951 41027453 -62467521 + RMER16 LTR ERVK 2 531 -2 4 898 4226 214 26 85 chr15 41027453 41027830 -62467144 + Lx7 LINE L1 7382 7692 -4 3 898 22 56 0 0 chr15 41027831 41027867 -62467107 + AT_rich Low_complexity Low_complexity 1 36 0 4 898 22 35 0 0 chr15 41028264 41028293 -62466681 + AT_rich Low_complexity Low_complexity 1 29 0 4 898 447 19 0 0 chr15 41028771 41028823 -62466151 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 898 243 315 67 37 chr15 41030416 41030551 -62464423 + L2c LINE L2 3023 3161 -226 4 898 27 0 0 0 chr15 41030879 41030906 -62464068 + AT_rich Low_complexity Low_complexity 1 27 0 4 898 944 244 246 29 chr15 41032286 41032628 -62462346 - MTD LTR MaLR -3 416 1 4 898 279 0 0 0 chr15 41032950 41032981 -62461993 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 898 313 89 22 0 chr15 41034177 41034222 -62460752 - RMER6D LTR ERVK -585 135 90 5 898 300 111 22 0 chr15 41034258 41034303 -62460671 - RMER6D LTR ERVK -585 135 90 5 898 803 323 19 75 chr15 41034562 41034713 -62460261 + B4A SINE B4 2 152 -140 5 898 2177 111 6 33 chr15 41034713 41035049 -62459925 + ORR1A2 LTR MaLR 1 327 0 5 898 803 323 19 75 chr15 41035049 41035205 -62459769 + B4A SINE B4 153 292 0 5 898 202 318 0 15 chr15 41035373 41035440 -62459534 - MIRm SINE MIR -9 267 202 5 898 275 268 59 40 chr15 41035845 41035946 -62459028 - B4 SINE B4 0 292 190 5 898 2147 299 68 34 chr15 41035946 41036115 -62458859 - Lx8 LINE L1 -349 7124 6955 5 898 2429 144 31 0 chr15 41036115 41036496 -62458478 + ORR1B1 LTR MaLR 2 394 0 5 898 2147 299 68 34 chr15 41036496 41037243 -62457731 - Lx8 LINE L1 -519 6954 6177 5 898 718 147 19 13 chr15 41037261 41037420 -62457554 + (TA)n Simple_repeat Simple_repeat 1 160 0 5 898 3755 157 66 1 chr15 41037420 41038069 -62456905 + RLTR17 LTR ERVK 1 691 -1 5 898 398 305 89 54 chr15 41038069 41038440 -62456534 - Lx7 LINE L1 -1509 6187 5804 5 898 392 277 125 8 chr15 41038442 41038528 -62456446 - RLTR20A1 LTR ERVK 0 551 461 6 898 399 41 0 0 chr15 41038528 41038577 -62456397 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 898 392 262 128 62 chr15 41038577 41038698 -62456276 - RLTR20A1 LTR ERVK -91 460 314 6 898 325 319 8 0 chr15 41038699 41038818 -62456156 - Lx7 LINE L1 -1974 5722 5603 5 898 917 242 158 20 chr15 41038819 41039312 -62455662 + L1_Mur3 LINE L1 4250 4810 -1070 6 898 342 0 0 0 chr15 41039391 41039429 -62455545 + (TC)n Simple_repeat Simple_repeat 1 38 0 6 898 180 0 0 0 chr15 41039429 41039448 -62455526 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 898 267 31 0 0 chr15 41039449 41039481 -62455493 + (GA)n Simple_repeat Simple_repeat 2 33 0 6 898 270 276 79 49 chr15 41040995 41041159 -62453815 + MER3 DNA MER1_type 41 209 0 6 898 371 284 20 26 chr15 41041327 41041479 -62453495 + GA-rich Low_complexity Low_complexity 2 152 0 6 898 22 0 0 0 chr15 41042099 41042121 -62452853 + AT_rich Low_complexity Low_complexity 1 22 0 6 898 706 275 117 15 chr15 41044072 41044391 -62450583 - RMER20B LTR ERVK -2 514 166 6 898 202 275 0 14 chr15 41045891 41045961 -62449013 + T-rich Low_complexity Low_complexity 3 71 0 7 898 6781 69 19 13 chr15 41047195 41048384 -62446590 - L1Md_F2 LINE L1 -12 6570 5381 7 898 542 113 61 20 chr15 41048385 41048484 -62446490 - L1VL1 LINE L1 -6127 295 193 7 898 734 281 38 82 chr15 41048513 41048881 -62446093 - RMER17C LTR ERVK -58 352 1 7 898 841 269 44 10 chr15 41050780 41050983 -62443991 + B3 SINE B2 7 216 0 7 898 1145 171 63 23 chr15 41051725 41051946 -62443028 - RLTR23 LTR ERV1 0 430 201 7 898 644 111 10 0 chr15 41051924 41052023 -62442951 - HY1 scRNA scRNA -12 100 1 7 898 449 335 36 14 chr15 41052132 41052499 -62442475 - RLTR6-int LTR ERV1 -102 7676 7053 7 898 259 261 14 14 chr15 41052995 41053065 -62441909 - MuRRS4-int LTR ERV1 -753 4564 4495 7 898 1096 306 52 23 chr15 41053390 41053872 -62441102 - MuRRS4-int LTR ERV1 -1040 4023 3528 7 898 343 349 0 0 chr15 41054254 41054406 -62440568 - RLTR6-int LTR ERV1 -3256 4522 4371 7 898 1099 326 43 24 chr15 41054671 41055847 -62439127 - RLTR6-int LTR ERV1 -3675 3881 2593 7 898 309 277 61 18 chr15 41056112 41056226 -62438748 - RLTR6-int LTR ERV1 -6251 1527 1409 7 898 259 132 0 0 chr15 41056197 41056235 -62438739 - RLTR6-int LTR ERV1 -6311 1290 1253 7 898 255 294 95 27 chr15 41057256 41057403 -62437571 + LTRIS_Mus LTR ERV1 382 538 -49 8 898 201 74 0 0 chr15 41057529 41057556 -62437418 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 8 898 259 170 0 0 chr15 41057948 41058001 -62436973 + RLTR4_MM-int LTR ERV1 867 919 -2779 8 898 288 300 0 0 chr15 41058230 41058320 -62436654 + RLTR4_MM-int LTR ERV1 1296 1385 -6216 8 898 267 184 30 30 chr15 41058565 41058666 -62436308 + MMVL30-int LTR ERV1 960 1060 -2239 8 898 325 123 0 0 chr15 41058757 41058814 -62436160 + MMVL30-int LTR ERV1 1455 1511 -2187 8 898 387 60 0 0 chr15 41058919 41058969 -62436005 + (GA)n Simple_repeat Simple_repeat 1 50 0 8 898 265 271 0 0 chr15 41059009 41059068 -62435906 + B1F2 SINE Alu 1 59 -90 8 898 1154 175 51 19 chr15 41059116 41059391 -62435583 + MMVL30-int LTR ERV1 1516 1783 -1915 8 898 1429 292 108 71 chr15 41059404 41059657 -62435317 + MMVL30-int LTR ERV1 3833 4100 -3506 8 898 2827 47 103 0 chr15 41059657 41060016 -62434958 - MTA_Mm LTR MaLR 0 396 1 8 898 2554 239 67 47 chr15 41060016 41061188 -62433786 + MMVL30-int LTR ERV1 2874 3347 -351 8 898 2662 108 5 2 chr15 41061195 41061604 -62433370 + L1_Mm LINE L1 4499 4908 -975 8 898 347 221 45 23 chr15 41061705 41061793 -62433181 - RLTR23 LTR ERV1 -2 428 339 8 898 802 282 39 15 chr15 41062403 41062662 -62432312 - Lx8 LINE L1 -204 7269 7005 8 898 282 280 75 35 chr15 41062714 41062940 -62432034 + RMER17C LTR ERVK 15 249 -161 9 898 492 279 113 47 chr15 41062943 41063218 -62431756 + RMER17C LTR ERVK 84 376 -34 9 898 1144 214 4 85 chr15 41064184 41064444 -62430530 + MER67D LTR ERV1 73 311 -203 9 898 353 236 203 0 chr15 41064539 41064662 -62430312 + MER67D LTR ERV1 333 480 -34 9 898 4059 51 94 0 chr15 41065498 41066010 -62428964 + LTRIS2 LTR ERV1 5 564 0 9 898 3395 77 0 11 chr15 41066178 41066638 -62428336 - L1Md_F2 LINE L1 0 6582 6128 9 898 4311 56 0 0 chr15 41067303 41067838 -62427136 - L1Md_F2 LINE L1 -1 6581 6047 9 898 437 276 74 29 chr15 41067921 41068096 -62426878 + RLTR41 LTR ERV1 264 446 0 9 898 278 325 0 0 chr15 41068367 41068444 -62426530 - ID4_ SINE ID -1 82 6 9 898 297 0 0 0 chr15 41068804 41068837 -62426137 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 898 306 0 0 0 chr15 41068837 41068870 -62426104 + (CA)n Simple_repeat Simple_repeat 1 34 0 9 898 2099 219 61 17 chr15 41068887 41069348 -62425626 - RMER15 LTR ERVL -86 489 9 1 898 324 0 0 0 chr15 41069608 41069644 -62425330 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1 898 30 45 0 0 chr15 41070189 41070233 -62424741 + AT_rich Low_complexity Low_complexity 1 44 0 1 898 6029 189 86 34 chr15 41070663 41071916 -62423058 - RMER12B LTR ERVK 0 1404 84 1 898 1888 141 151 17 chr15 41071916 41072321 -62422653 + RMER6B LTR ERVK 1 459 -2 1 898 6029 189 86 34 chr15 41072321 41072401 -62422573 - RMER12B LTR ERVK -1321 83 1 1 898 1546 235 100 38 chr15 41072479 41072899 -62422075 - RLTR41 LTR ERV1 0 446 1 1 898 683 269 84 0 chr15 41073348 41073623 -62421351 + Lx6 LINE L1 7136 7433 -27 1 898 627 26 0 0 chr15 41074066 41074143 -62420831 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 0 1 898 24 32 0 0 chr15 41075039 41075070 -62419904 + AT_rich Low_complexity Low_complexity 1 31 0 1 898 33962 45 2 3 chr15 41075867 41081361 -62413613 + L1Md_T LINE L1 8 5589 -297 1 898 8527 30 0 0 chr15 41081361 41082357 -62412617 + L1Md_T LINE L1 5590 6585 0 1 898 3595 207 75 30 chr15 41082757 41083580 -62411394 + RMER13A LTR ERVK 1 860 0 1 898 1077 218 0 14 chr15 41083689 41083898 -62411076 - RMER13A LTR ERVK -560 300 95 1 898 731 287 44 20 chr15 41083907 41084202 -62410772 - L1_Rod LINE L1 -161 5686 5385 1 898 727 219 155 0 chr15 41085118 41085305 -62409669 + B3 SINE B2 1 216 0 1 898 1266 187 302 0 chr15 41085556 41085870 -62409104 - MTC LTR MaLR -11 410 2 1 898 722 253 32 100 chr15 41086748 41086968 -62408006 + B3 SINE B2 1 205 -11 1 898 705 214 12 0 chr15 41087226 41087365 -62407609 - MTC LTR MaLR 0 421 234 1 898 429 20 0 0 chr15 41089544 41089594 -62405380 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 898 236 203 0 0 chr15 41090415 41090474 -62404500 - Lx9 LINE L1 -7 7637 7579 1 898 2845 173 27 15 chr15 41090507 41091034 -62403940 - RLTR20B3 LTR ERVK -40 537 5 1 898 312 173 27 0 chr15 41091043 41091118 -62403856 - Lx9 LINE L1 -79 7565 7489 1 898 345 200 25 12 chr15 41091138 41091219 -62403755 - Lx9 LINE L1 -214 7430 7349 1 898 468 0 0 0 chr15 41091714 41091766 -62403208 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 898 627 324 51 16 chr15 41091958 41092215 -62402759 + B4A SINE B4 24 289 -3 1 898 3050 23 0 0 chr15 41092245 41092591 -62402383 + ORR1A0 LTR MaLR 1 346 0 1 898 12306 52 7 2 chr15 41092591 41094219 -62400755 + ORR1A0-int LTR MaLR 1 1636 -156 1 898 289 0 0 0 chr15 41094218 41094251 -62400723 + ORR1A0 LTR MaLR 291 323 -3 1 898 270 0 0 0 chr15 41094251 41094281 -62400693 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 898 327 216 11 33 chr15 41095482 41095573 -62399401 + LTR37B LTR ERV1 339 427 -41 1 898 683 319 26 56 chr15 41095699 41095820 -62399154 - B4A SINE B4 -1 291 175 1 898 206 32 32 0 chr15 41095820 41095851 -62399123 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1 898 683 319 26 56 chr15 41095851 41095995 -62398979 - B4A SINE B4 -118 174 34 1 898 715 287 34 34 chr15 41096048 41096257 -62398717 - ID_B1 SINE B4 -2 222 14 1 898 235 0 57 0 chr15 41097210 41097245 -62397729 + (TTG)n Simple_repeat Simple_repeat 3 39 0 1 898 216 0 0 0 chr15 41097245 41097269 -62397705 + (TGG)n Simple_repeat Simple_repeat 2 25 0 1 898 1116 102 0 0 chr15 41097738 41097885 -62397089 - B1_Mus2 SINE Alu 0 147 1 1 898 1629 181 24 111 chr15 41098088 41098467 -62396507 + ORR1B1 LTR MaLR 41 386 -8 1 898 5963 100 38 91 chr15 41098631 41099641 -62395333 + RMER17B LTR ERVK 3 958 0 1 898 1960 164 16 54 chr15 41100206 41100574 -62394400 - ORR1B1 LTR MaLR 0 394 41 1 898 273 75 0 0 chr15 41101125 41101165 -62393809 + (CAAG)n Simple_repeat Simple_repeat 2 41 0 1 898 213 420 0 0 chr15 41101750 41101838 -62393136 + PB1D10 SINE Alu 1 88 -29 1 898 225 390 0 0 chr15 41101762 41101844 -62393130 + ID_B1 SINE B4 94 175 -49 1 898 304 343 17 17 chr15 41102064 41102236 -62392738 + Lx9 LINE L1 7270 7441 -203 1 898 450 65 0 0 chr15 41102252 41102314 -62392660 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 898 296 192 27 0 chr15 41102595 41102668 -62392306 + GA-rich Low_complexity Low_complexity 4 78 0 1 898 8179 119 45 16 chr15 41103179 41105253 -62389721 + L1VL4 LINE L1 193 2323 -1236 1 898 3075 149 25 2 chr15 41105245 41105809 -62389165 + L1_Mm LINE L1 4966 5542 -341 1 898 287 150 17 0 chr15 41107938 41107998 -62386976 + GA-rich Low_complexity Low_complexity 4 64 0 1 898 25 0 0 0 chr15 41111477 41111502 -62383472 + AT_rich Low_complexity Low_complexity 1 25 0 1 898 479 332 73 71 chr15 41111535 41111770 -62383204 + MLT1C LTR MaLR 72 307 -160 1 898 6671 67 38 13 chr15 41111770 41112677 -62382297 + RLTR13B3 LTR ERVK 1 929 0 1 898 479 332 73 71 chr15 41112677 41112836 -62382138 + MLT1C LTR MaLR 308 466 -1 1 898 2406 260 30 115 chr15 41114057 41115131 -62379843 - RMER17B LTR ERVK -3 857 4 1 898 416 344 67 49 chr15 41115428 41115743 -62379231 + ORR1E LTR MaLR 1 341 -38 1 898 1258 178 27 69 chr15 41116096 41116428 -62378546 + Lx9 LINE L1 7194 7511 -133 1 898 212 250 27 18 chr15 41116428 41116538 -62378436 + (TA)n Simple_repeat Simple_repeat 1 111 0 1 898 529 232 7 0 chr15 41116566 41116717 -62378257 + Lx9 LINE L1 7492 7643 -1 1 898 216 0 0 0 chr15 41116909 41116933 -62378041 + (GTTTG)n Simple_repeat Simple_repeat 5 28 0 1 898 1233 41 0 0 chr15 41116937 41117084 -62377890 - B1_Mus1 SINE Alu 0 148 2 1 898 532 314 59 121 chr15 41117807 41118195 -62376779 - RLTR12B LTR ERVK -146 382 19 1 898 834 61 96 29 chr15 41119054 41119190 -62375784 - BC1_Mm scRNA scRNA -7 145 1 1 898 687 187 0 171 chr15 41119192 41119379 -62375595 - ORR1D1 LTR MaLR -219 155 1 1 898 282 206 0 0 chr15 41120094 41120162 -62374812 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 898 706 286 6 0 chr15 41120164 41120342 -62374632 - B3A SINE B2 -18 180 2 1 898 389 289 128 60 chr15 41120522 41120787 -62374187 + RMER5 LTR ERV1 72 354 -180 1 898 294 314 19 29 chr15 41120800 41120905 -62374069 + RMER5 LTR ERV1 400 503 -31 1 898 1393 222 167 9 chr15 41121663 41122004 -62372970 + MTD LTR MaLR 5 399 -20 1 898 422 159 27 20 chr15 41122285 41122433 -62372541 + (TA)n Simple_repeat Simple_repeat 2 150 0 1 898 360 0 0 0 chr15 41123339 41123379 -62371595 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 898 271 286 175 0 chr15 41123910 41124056 -62370918 + MIR SINE MIR 35 204 -64 1 898 2275 139 62 1 chr15 41124250 41124664 -62370310 + RLTR20A1 LTR ERVK 6 484 -94 1 898 180 0 0 0 chr15 41124664 41124684 -62370290 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 898 1965 184 203 7 chr15 41124684 41124756 -62370218 + RLTR20A1 LTR ERVK 485 578 0 1 898 261 281 50 50 chr15 41124773 41124893 -62370081 + L1MA4A LINE L1 5811 5930 -373 1 898 23 0 0 0 chr15 41125993 41126016 -62368958 + AT_rich Low_complexity Low_complexity 1 23 0 1 898 430 331 77 62 chr15 41126069 41126242 -62368732 + RMER5 LTR ERV1 84 251 -283 1 898 401 289 183 43 chr15 41126242 41126564 -62368410 - RLTR9A LTR ERVK 0 368 2 1 898 430 331 77 62 chr15 41126564 41126728 -62368246 + RMER5 LTR ERV1 252 426 -108 1 898 1210 34 14 0 chr15 41127034 41127180 -62367794 + B1_Mus1 SINE Alu 1 148 0 1 898 23 0 0 0 chr15 41128939 41128962 -62366012 + AT_rich Low_complexity Low_complexity 1 23 0 1 898 375 274 133 26 chr15 41129905 41130175 -62364799 - Lx9 LINE L1 -15 7629 7331 1 898 322 253 159 50 chr15 41130178 41130335 -62364639 + MTEb LTR MaLR 192 376 -3 1 898 431 250 42 32 chr15 41130557 41130652 -62364322 - ORR1E LTR MaLR -298 96 1 1 898 218 211 18 0 chr15 41131720 41131777 -62363197 + A-rich Low_complexity Low_complexity 1 58 0 1 898 507 69 0 0 chr15 41131859 41131931 -62363043 + (TATG)n Simple_repeat Simple_repeat 1 72 0 1 898 516 312 14 14 chr15 41131936 41132076 -62362898 - RSINE1 SINE B4 -14 151 12 1 898 192 281 53 136 chr15 41132281 41132413 -62362561 + L3 LINE CR1 756 876 -3613 1 898 279 183 170 11 chr15 41132461 41132555 -62362419 + Lx9 LINE L1 7052 7160 -484 1 898 362 319 63 28 chr15 41132571 41132826 -62362148 + Lx9 LINE L1 7226 7489 -155 1 898 207 0 0 0 chr15 41132893 41132916 -62362058 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1 898 1183 61 0 0 chr15 41134037 41134184 -62360790 + B1_Mus1 SINE Alu 2 148 0 1 898 1129 261 55 69 chr15 41136201 41136580 -62358394 - MTE2b LTR MaLR -5 374 1 1 898 269 314 189 60 chr15 41137234 41137451 -62357523 - MLT1A0 LTR MaLR -61 304 60 1 898 23 0 0 0 chr15 41137517 41137540 -62357434 + AT_rich Low_complexity Low_complexity 1 23 0 1 898 1158 253 49 78 chr15 41137590 41137718 -62357256 - RLTR33 LTR ERVK -27 651 522 1 898 1070 136 16 0 chr15 41137718 41137902 -62357072 + Lx2 LINE L1 6811 6997 0 1 898 1158 219 24 47 chr15 41137902 41138221 -62356753 - RLTR33 LTR ERVK -157 521 175 1 898 643 208 6 123 chr15 41138780 41138950 -62356024 - B1_Mur4 SINE Alu 0 150 1 1 898 510 17 0 0 chr15 41140758 41140817 -62354157 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 898 1342 201 101 23 chr15 41141131 41141478 -62353496 - ORR1D1 LTR MaLR 0 374 1 1 898 200 385 56 32 chr15 41141627 41141753 -62353221 - L2 LINE L2 -937 2482 2354 1 898 201 288 58 80 chr15 41143229 41143414 -62351560 + MIRm SINE MIR 6 183 -93 1 898 180 0 0 0 chr15 41144073 41144093 -62350881 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 898 867 46 0 0 chr15 41144093 41144200 -62350774 + (GA)n Simple_repeat Simple_repeat 1 108 0 1 898 22 70 0 0 chr15 41145079 41145122 -62349852 + AT_rich Low_complexity Low_complexity 1 43 0 1 898 502 175 82 0 chr15 41146552 41146649 -62348325 + B1_Mur2 SINE Alu 3 107 -42 1 898 1976 197 85 81 chr15 41146652 41147171 -62347803 - RMER13B LTR ERVK 0 908 388 1 898 203 116 23 23 chr15 41147172 41147216 -62347758 + T-rich Low_complexity Low_complexity 1 44 0 1 898 2191 118 124 15 chr15 41147217 41147613 -62347361 - Lx LINE L1 -2 6652 6214 1 898 2064 173 53 3 chr15 41147613 41147972 -62347002 - RMER13B LTR ERVK -524 384 8 1 898 218 116 22 44 chr15 41147974 41148019 -62346955 + PB1D10 SINE Alu 73 116 -1 1 898 183 80 0 0 chr15 41148021 41148046 -62346928 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 1 898 6224 230 41 30 chr15 41148653 41149213 -62345761 - Lx7 LINE L1 -396 7300 6731 1 898 252 86 0 0 chr15 41149213 41149248 -62345726 + (CCTA)n Simple_repeat Simple_repeat 1 35 0 2 898 6224 230 41 30 chr15 41149248 41149786 -62345188 - Lx7 LINE L1 -966 6730 6165 1 898 408 40 0 0 chr15 41149786 41149836 -62345138 + (TCTA)n Simple_repeat Simple_repeat 2 51 0 2 898 6224 214 20 34 chr15 41149836 41150619 -62344355 - Lx7 LINE L1 -1532 6164 5394 1 898 2229 106 139 57 chr15 41150619 41151059 -62343915 - RLTR45 LTR ERVK -6 476 1 2 898 646 177 45 17 chr15 41151059 41151237 -62343737 - Lx7 LINE L1 -482 5398 5216 1 898 5678 161 28 63 chr15 41151234 41151604 -62343370 - Lx7 LINE L1 -1826 4054 3677 1 898 1758 180 90 0 chr15 41151604 41151948 -62343026 - ORR1C1 LTR MaLR 0 378 4 2 898 5678 161 28 63 chr15 41151948 41152492 -62342482 - Lx7 LINE L1 -2204 3676 3138 1 898 207 0 0 0 chr15 41152492 41152515 -62342459 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 898 5678 161 28 63 chr15 41152515 41152703 -62342271 - Lx7 LINE L1 -2743 3137 2993 1 898 245 0 86 0 chr15 41152703 41152738 -62342236 + (TTTTA)n Simple_repeat Simple_repeat 5 42 0 2 898 5678 161 28 63 chr15 41152738 41152965 -62342009 - Lx7 LINE L1 -2888 2992 2772 1 898 683 180 14 7 chr15 41152968 41153108 -62341866 - Lx7 LINE L1 -7291 437 297 1 898 29 78 0 0 chr15 41154532 41154596 -62340378 + AT_rich Low_complexity Low_complexity 1 64 0 2 898 200 132 26 0 chr15 41155013 41155051 -62339923 + A-rich Low_complexity Low_complexity 3 41 0 2 899 1205 62 0 0 chr15 41157011 41157157 -62337817 - B1_Mus2 SINE Alu -1 146 1 2 899 583 276 45 19 chr15 41157526 41157681 -62337293 - RSINE1 SINE B4 -5 160 2 2 899 236 336 7 7 chr15 41157695 41157830 -62337144 + L1MD LINE L1 2655 2789 -3357 2 899 825 184 0 7 chr15 41158111 41158253 -62336721 + B1_Mur4 SINE Alu 2 142 -8 2 899 791 129 8 0 chr15 41158266 41158398 -62336576 + (GA)n Simple_repeat Simple_repeat 2 134 0 2 899 431 285 33 53 chr15 41158631 41158783 -62336191 - B1F SINE Alu 0 149 1 2 899 362 267 41 136 chr15 41159433 41159676 -62335298 + MLT1D LTR MaLR 1 220 -285 2 899 231 331 23 15 chr15 41159679 41159811 -62335163 + (CATA)n Simple_repeat Simple_repeat 4 136 0 2 899 25 0 0 0 chr15 41159984 41160009 -62334965 + AT_rich Low_complexity Low_complexity 1 25 0 2 899 2787 169 105 50 chr15 41160808 41161387 -62333587 - RMER19C LTR ERVK 0 611 1 2 899 22 56 0 0 chr15 41161410 41161446 -62333528 + AT_rich Low_complexity Low_complexity 1 36 0 2 899 239 242 31 75 chr15 41161614 41161775 -62333199 + (CAGAGA)n Simple_repeat Simple_repeat 3 156 0 2 899 1407 218 71 29 chr15 41161972 41162354 -62332620 - RMER10B LTR ERVL 0 398 1 2 899 238 355 96 7 chr15 41162691 41162827 -62332147 - Charlie4z DNA MER1_type -18 149 2 2 899 211 262 100 0 chr15 41164125 41164205 -62330769 - MIR SINE MIR -67 195 108 2 899 998 241 56 64 chr15 41164432 41164894 -62330080 + Lx7 LINE L1 50 791 -6937 2 899 3336 161 21 26 chr15 41164894 41165507 -62329467 + RLTR25B LTR ERVK 6 615 -413 2 899 6085 162 54 52 chr15 41165509 41166301 -62328673 + Lx7 LINE L1 1283 2068 -3812 2 899 333 0 0 0 chr15 41166301 41166338 -62328636 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 899 6085 162 58 49 chr15 41166338 41167113 -62327861 + Lx7 LINE L1 2069 2858 -3022 2 899 7032 225 44 35 chr15 41167083 41168940 -62326034 + Lx7 LINE L1 5117 7047 -649 2 899 5961 49 24 5 chr15 41168940 41169695 -62325279 - L1Md_F2 LINE L1 -12 6570 5802 2 899 7032 242 60 48 chr15 41169695 41170386 -62324588 + Lx7 LINE L1 7048 7695 -1 2 899 200 31 0 59 chr15 41170696 41170730 -62324244 + (TCTCTG)n Simple_repeat Simple_repeat 2 33 0 2 899 378 0 0 0 chr15 41171092 41171134 -62323840 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2 899 247 304 12 48 chr15 41171160 41171243 -62323731 - MIR SINE MIR -172 90 11 2 899 282 115 0 0 chr15 41171467 41171519 -62323455 + (A)n Simple_repeat Simple_repeat 1 52 0 2 899 5009 140 18 82 chr15 41171803 41172767 -62322207 + RLTR13D6 LTR ERVK 1 902 0 2 899 812 286 42 82 chr15 41172912 41173306 -62321668 - RLTR26 LTR ERVK -182 460 45 2 899 186 118 0 0 chr15 41173344 41173378 -62321596 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 899 263 281 221 8 chr15 41173391 41173513 -62321461 + MLT1D LTR MaLR 25 172 -333 2 899 1201 196 4 4 chr15 41173781 41174012 -62320962 + L1_Rod LINE L1 5617 5847 0 2 899 204 98 0 89 chr15 41174191 41174236 -62320738 + T-rich Low_complexity Low_complexity 2 42 0 2 899 180 0 0 0 chr15 41174407 41174427 -62320547 + (CAG)n Simple_repeat Simple_repeat 1 20 0 2 899 4727 79 18 11 chr15 41174458 41175121 -62319853 - L1_Mus3 LINE L1 -67 6569 5902 2 899 264 155 17 0 chr15 41175121 41175179 -62319795 + L1_Mus3 LINE L1 6570 6628 -10 2 899 244 322 119 33 chr15 41175972 41176123 -62318851 + MamRep434 DNA TcMar 1 164 -262 2 899 767 169 48 32 chr15 41177214 41177403 -62317571 - B2_Mm2 SINE B2 0 195 4 2 899 315 0 0 0 chr15 41177617 41177652 -62317322 + (T)n Simple_repeat Simple_repeat 1 35 0 2 899 1957 158 84 16 chr15 41178140 41178520 -62316454 + MTC LTR MaLR 16 421 0 2 899 1584 200 117 67 chr15 41178890 41179446 -62315528 + RLTR31A_Mm LTR ERVK 1 584 0 2 899 287 347 99 0 chr15 41182296 41182417 -62312557 + MER5B DNA MER1_type 38 170 -8 2 899 21 0 0 0 chr15 41182588 41182609 -62312365 + AT_rich Low_complexity Low_complexity 1 21 0 2 899 476 372 49 0 chr15 41182635 41182818 -62312156 - B4A SINE B4 -100 192 1 2 899 228 67 0 0 chr15 41182961 41182991 -62311983 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 899 185 132 26 0 chr15 41183077 41183115 -62311859 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 899 214 191 0 0 chr15 41183478 41183520 -62311454 + A-rich Low_complexity Low_complexity 1 42 0 2 899 382 275 224 32 chr15 41183759 41184067 -62310907 + RLTR9A LTR ERVK 1 367 -1 2 899 771 108 0 0 chr15 41184125 41184245 -62310729 + (GGGGA)n Simple_repeat Simple_repeat 1 120 0 2 899 330 50 49 16 chr15 41184325 41184386 -62310588 + (CAAAA)n Simple_repeat Simple_repeat 2 64 0 2 899 3022 20 3 0 chr15 41185187 41185532 -62309442 - ORR1A0 LTR MaLR 0 346 1 2 899 450 0 0 0 chr15 41185803 41185853 -62309121 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 899 268 299 217 8 chr15 41186171 41186336 -62308638 + MIR SINE MIR 16 222 -46 2 899 935 82 0 7 chr15 41186578 41186713 -62308261 + (TTTC)n Simple_repeat Simple_repeat 2 135 0 2 899 269 128 51 13 chr15 41187593 41187672 -62307302 + (TAAA)n Simple_repeat Simple_repeat 3 84 0 2 899 2236 241 25 22 chr15 41187807 41188316 -62306658 + Lx6 LINE L1 6908 7418 -42 2 899 469 292 7 21 chr15 41188575 41188715 -62306259 - B1F1 SINE Alu 0 149 12 2 899 228 309 0 75 chr15 41188816 41188980 -62305994 + GA-rich Low_complexity Low_complexity 1 151 0 2 899 271 141 56 0 chr15 41190179 41190250 -62304724 + (TCTCTG)n Simple_repeat Simple_repeat 6 80 0 2 899 1014 31 0 0 chr15 41192205 41192332 -62302642 + B1_Mm SINE Alu 19 145 -2 2 899 249 83 0 0 chr15 41192334 41192370 -62302604 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 2 899 279 340 26 7 chr15 41193194 41193345 -62301629 + (CATA)n Simple_repeat Simple_repeat 1 154 0 2 899 222 37 0 0 chr15 41193547 41193574 -62301400 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 899 375 339 87 12 chr15 41193886 41194059 -62300915 + MIR SINE MIR 58 243 -19 2 899 510 252 44 0 chr15 41194173 41194308 -62300666 - B1_Mur1 SINE Alu -6 143 3 2 899 10034 127 14 2 chr15 41194513 41197016 -62297958 + Lx LINE L1 4119 6653 -1 2 899 24 96 0 0 chr15 41197099 41197172 -62297802 + AT_rich Low_complexity Low_complexity 1 73 0 2 899 1755 209 75 65 chr15 41197181 41197672 -62297302 - RLTR20B3 LTR ERVK -61 516 21 2 899 27 29 0 0 chr15 41197832 41197866 -62297108 + AT_rich Low_complexity Low_complexity 1 34 0 2 899 274 296 0 0 chr15 41197868 41197949 -62297025 - ID_B1 SINE B4 -3 221 141 2 899 32 75 0 0 chr15 41197979 41198046 -62296928 + AT_rich Low_complexity Low_complexity 1 67 0 2 899 1028 174 259 4 chr15 41200028 41200264 -62294710 - Lx6 LINE L1 -764 6696 6401 2 899 3031 230 65 24 chr15 41200264 41200986 -62293988 + Lx6 LINE L1 6709 7460 0 2 899 546 289 6 36 chr15 41201063 41201228 -62293746 + RMER30 DNA MER1_type 1 160 -42 2 899 477 0 0 0 chr15 41201297 41201350 -62293624 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 2 899 1406 181 43 204 chr15 41201452 41201897 -62293077 + ORR1D1 LTR MaLR 1 373 -1 2 899 661 262 42 60 chr15 41202206 41202452 -62292522 - LTRIS4 LTR ERV1 0 624 298 2 899 223 338 0 0 chr15 41202885 41202956 -62292018 - MIRc SINE MIR -77 191 121 2 899 268 240 31 0 chr15 41204418 41204501 -62290473 - Lx6 LINE L1 -381 5931 5828 2 899 228 364 76 23 chr15 41204674 41204911 -62290063 - MIRc SINE MIR 0 262 10 2 899 299 275 18 27 chr15 41206022 41206134 -62288840 - Lx2A1 LINE L1 -1102 5906 5796 2 899 552 42 0 0 chr15 41206140 41206211 -62288763 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 899 1216 239 183 0 chr15 41206213 41206585 -62288389 - Lx6 LINE L1 -138 5742 5303 2 899 24 0 0 0 chr15 41208121 41208145 -62286829 + AT_rich Low_complexity Low_complexity 1 24 0 2 899 520 312 52 23 chr15 41209131 41209305 -62285669 + B3A SINE B2 2 180 -18 2 899 359 290 184 8 chr15 41209389 41209514 -62285460 + B4 SINE B4 43 189 -103 2 899 531 239 277 0 chr15 41209528 41209687 -62285287 + B3 SINE B2 1 203 -13 2 899 339 219 0 0 chr15 41209795 41209891 -62285083 + (CA)n Simple_repeat Simple_repeat 2 97 0 2 899 183 305 91 45 chr15 41210870 41210980 -62283994 + L3 LINE CR1 747 861 -3628 2 899 639 361 81 17 chr15 41212410 41212889 -62282085 - Lx8 LINE L1 -1 7472 6963 2 899 2692 98 100 2 chr15 41212894 41213314 -62281660 + L1_Mus3 LINE L1 6175 6635 -3 2 899 182 62 31 0 chr15 41213323 41213355 -62281619 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 2 899 7517 70 5 16 chr15 41213355 41214639 -62280335 + L1_Mus2 LINE L1 5292 6564 -2 2 899 8159 140 46 2 chr15 41214640 41216611 -62278363 - Lx4B LINE L1 -581 6477 4407 2 899 984 327 32 11 chr15 41216655 41217093 -62277881 - Lx8 LINE L1 -915 6781 6318 2 899 450 0 0 0 chr15 41217392 41217442 -62277532 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 899 27 0 0 0 chr15 41218849 41218876 -62276098 + AT_rich Low_complexity Low_complexity 1 27 0 2 899 314 301 43 43 chr15 41219878 41220017 -62274957 + MLT1H2 LTR MaLR 338 476 -13 2 899 189 0 0 0 chr15 41220263 41220284 -62274690 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2 899 1029 72 0 0 chr15 41223124 41223276 -62271698 + (GGAGA)n Simple_repeat Simple_repeat 3 154 0 2 899 198 158 0 0 chr15 41223276 41223307 -62271667 + GA-rich Low_complexity Low_complexity 11 41 0 2 899 2043 220 20 78 chr15 41223307 41223404 -62271570 + RLTR18B LTR ERVK 1 93 -419 2 899 2191 111 9 0 chr15 41223404 41223728 -62271246 + ORR1A2 LTR MaLR 1 327 0 3 899 2043 220 20 78 chr15 41223728 41224118 -62270856 + RLTR18B LTR ERVK 94 460 -52 2 899 192 231 0 0 chr15 41224134 41224186 -62270788 + G-rich Low_complexity Low_complexity 1 52 0 3 899 780 11 0 0 chr15 41224191 41224280 -62270694 + (GAA)n Simple_repeat Simple_repeat 1 89 0 3 899 309 51 0 0 chr15 41224280 41224319 -62270655 + (GA)n Simple_repeat Simple_repeat 1 39 0 3 899 264 59 0 0 chr15 41224646 41224680 -62270294 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 899 223 156 0 45 chr15 41225355 41225422 -62269552 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 3 899 28 61 0 0 chr15 41225457 41225506 -62269468 + AT_rich Low_complexity Low_complexity 1 49 0 3 899 2166 292 53 46 chr15 41225564 41225980 -62268994 - Lx8 LINE L1 -110 7363 6921 3 899 3455 15 10 0 chr15 41225980 41226372 -62268602 + MTA_Mm LTR MaLR 1 396 0 3 899 2166 292 53 46 chr15 41226372 41226838 -62268136 - Lx8 LINE L1 -553 6920 6475 3 899 1812 123 86 0 chr15 41227050 41227351 -62267623 + IAPEY3_LTR LTR ERVK 1 327 -5 3 899 1643 124 133 69 chr15 41227864 41228210 -62266764 + RLTR9A LTR ERVK 1 368 0 3 899 1961 116 36 0 chr15 41229085 41229388 -62265586 - ORR1A2 LTR MaLR -13 314 1 3 899 320 229 49 0 chr15 41229691 41229752 -62265222 - ORR1E LTR MaLR -264 95 32 3 899 194 0 39 0 chr15 41230042 41230068 -62264906 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 899 2813 196 82 6 chr15 41230182 41230281 -62264693 - RMER1A Other Other -12 1018 901 3 899 351 0 0 0 chr15 41230281 41230320 -62264654 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 899 2813 196 82 6 chr15 41230320 41230856 -62264118 - RMER1A Other Other -130 900 336 3 899 1391 77 11 0 chr15 41231916 41232098 -62262876 - B2_Mm1t SINE B2 -9 184 1 3 899 576 0 0 0 chr15 41232137 41232201 -62262773 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 899 289 275 14 0 chr15 41232416 41232485 -62262489 - Lx8 LINE L1 -155 7318 7249 3 899 226 304 31 42 chr15 41232930 41233026 -62261948 - MIRb SINE MIR -155 113 19 3 899 2524 144 13 38 chr15 41233030 41233478 -62261496 - RMER6B LTR ERVK -24 437 1 3 899 908 326 49 66 chr15 41234361 41235015 -62259959 + Lx8 LINE L1 6781 7423 -50 3 899 847 124 7 7 chr15 41235017 41235163 -62259811 + (GAAA)n Simple_repeat Simple_repeat 3 148 0 3 899 966 206 36 14 chr15 41235508 41235730 -62259244 - ORR1D1 LTR MaLR 0 374 148 3 899 585 222 10 10 chr15 41235732 41236008 -62258966 + GA-rich Low_complexity Low_complexity 1 276 0 3 899 633 261 28 28 chr15 41236009 41236190 -62258784 - ORR1D1 LTR MaLR -193 181 1 3 899 385 317 33 5 chr15 41236760 41236944 -62258030 + CR1_Mam LINE CR1 766 954 -1250 3 899 330 267 47 44 chr15 41238090 41238132 -62256842 - RMER17D2 LTR ERVK -287 522 480 3 899 309 26 0 0 chr15 41238132 41238170 -62256804 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 899 330 267 47 44 chr15 41238170 41238401 -62256573 - RMER17D2 LTR ERVK -330 479 248 3 899 565 266 36 0 chr15 41238418 41238557 -62256417 - B1_Mur1 SINE Alu -5 144 1 3 899 213 39 0 0 chr15 41239120 41239146 -62255828 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 899 258 305 17 0 chr15 41239150 41239209 -62255765 + ID4_ SINE ID 24 83 0 3 899 505 205 119 8 chr15 41239345 41239463 -62255511 - B1F2 SINE Alu -1 148 18 3 899 22 0 0 0 chr15 41239879 41239901 -62255073 + AT_rich Low_complexity Low_complexity 1 22 0 3 899 261 0 0 0 chr15 41240007 41240036 -62254938 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 899 2151 122 82 8 chr15 41240912 41241276 -62253698 - RLTR9D LTR ERVK -12 391 1 3 899 552 100 0 0 chr15 41241402 41241482 -62253492 + (TCCA)n Simple_repeat Simple_repeat 1 80 0 3 899 235 228 60 48 chr15 41242252 41242335 -62252639 - L1MC LINE L1 -2087 5795 5712 3 899 3131 61 2 8 chr15 41242577 41242975 -62251999 - MTA_Mm LTR MaLR 0 396 1 3 899 953 283 24 60 chr15 41243978 41244313 -62250661 - RLTR23 LTR ERV1 -1 429 107 3 899 447 223 11 0 chr15 41244349 41244443 -62250531 - RLTR23 LTR ERV1 -330 100 6 3 899 21 36 0 0 chr15 41244673 41244701 -62250273 + AT_rich Low_complexity Low_complexity 1 28 0 3 899 28 71 0 0 chr15 41245171 41245227 -62249747 + AT_rich Low_complexity Low_complexity 1 56 0 3 899 222 191 0 0 chr15 41246109 41246151 -62248823 + (CAA)n Simple_repeat Simple_repeat 1 42 0 3 899 258 413 6 6 chr15 41246552 41246708 -62248266 + LTR83 LTR ERVL 54 209 -571 3 899 309 233 8 94 chr15 41246982 41247110 -62247864 - Lx9 LINE L1 -4 7640 7524 3 899 210 164 0 0 chr15 41247116 41247171 -62247803 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 899 527 29 14 0 chr15 41247254 41247323 -62247651 + (CA)n Simple_repeat Simple_repeat 1 70 0 3 899 1051 214 20 24 chr15 41247323 41247577 -62247397 - Lx9 LINE L1 -187 7457 7205 3 899 1314 93 22 11 chr15 41247597 41247782 -62247192 - B2_Mm2 SINE B2 -8 187 1 3 899 415 323 156 40 chr15 41248009 41248267 -62246707 + L1MC2 LINE L1 5289 5581 -752 3 899 1051 181 31 44 chr15 41248267 41248492 -62246482 - URR1B DNA MER1_type -3 222 1 3 899 415 323 156 40 chr15 41248492 41248655 -62246319 + L1MC2 LINE L1 5582 5759 -574 3 899 1142 283 19 11 chr15 41248708 41249080 -62245894 + L1MC2 LINE L1 5857 6231 -113 3 899 553 272 113 34 chr15 41249220 41249486 -62245488 - B4A SINE B4 -4 288 2 3 899 237 65 0 0 chr15 41250724 41250755 -62244219 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 3 899 370 222 36 36 chr15 41250793 41250933 -62244041 - Lx6 LINE L1 -179 7281 7142 3 899 2544 133 18 31 chr15 41250947 41251436 -62243538 + MMETn-int LTR ERVK 4362 4844 0 3 899 1741 138 9 59 chr15 41251436 41251775 -62243199 + RLTRETN_Mm LTR ERVK 1 322 0 3 899 30 69 0 0 chr15 41251896 41251954 -62243020 + AT_rich Low_complexity Low_complexity 1 58 0 3 899 1089 262 39 30 chr15 41253234 41253568 -62241406 + Lx8 LINE L1 6519 6855 -618 3 899 788 219 158 29 chr15 41253552 41253825 -62241149 + Lx8 LINE L1 7164 7471 -2 3 899 255 31 0 0 chr15 41254086 41254118 -62240856 + (TAAAAA)n Simple_repeat Simple_repeat 4 35 0 3 899 1216 266 75 58 chr15 41254523 41254864 -62240110 - L1MC1 LINE L1 -204 6129 5793 3 899 1289 182 0 0 chr15 41254864 41255089 -62239885 - URR1B DNA MER1_type 0 225 1 3 899 1216 277 73 58 chr15 41255089 41255611 -62239363 - L1MC1 LINE L1 -548 5796 5259 3 899 225 294 81 0 chr15 41255686 41255822 -62239152 - L1MC1 LINE L1 -991 5155 5009 3 899 1122 236 32 35 chr15 41255999 41256643 -62238331 + Lx6 LINE L1 919 1512 -4368 3 899 2889 180 16 49 chr15 41256643 41257379 -62237595 + Lx6 LINE L1 1780 2491 -3389 3 899 4558 214 64 15 chr15 41257379 41258762 -62236212 + Lx6 LINE L1 5375 6839 -621 3 899 290 87 0 21 chr15 41258766 41258813 -62236161 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 899 1330 256 30 3 chr15 41258834 41259171 -62235803 + Lx6 LINE L1 7115 7460 0 3 899 311 91 36 0 chr15 41259377 41259432 -62235542 + (CAGAGA)n Simple_repeat Simple_repeat 2 58 0 3 899 336 127 0 0 chr15 41260283 41260338 -62234636 + (TATG)n Simple_repeat Simple_repeat 1 55 0 3 899 373 165 72 32 chr15 41260340 41260465 -62234509 + Lx9 LINE L1 7514 7643 -1 3 899 826 112 72 0 chr15 41261273 41261398 -62233576 - B2_Mm2 SINE B2 -60 135 2 3 899 396 0 0 0 chr15 41262037 41262081 -62232893 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 899 235 301 11 11 chr15 41263589 41263683 -62231291 - Lx8 LINE L1 -1579 5894 5801 3 899 239 264 9 165 chr15 41263702 41263811 -62231163 + MT2B LTR ERVL 154 245 -356 3 899 405 242 158 0 chr15 41263717 41263812 -62231162 + B1_Mur3 SINE Alu 1 110 -39 3 899 312 298 64 55 chr15 41263978 41264088 -62230886 - PB1D7 SINE Alu -9 111 1 3 899 258 217 0 0 chr15 41264099 41264168 -62230806 + T-rich Low_complexity Low_complexity 1 69 0 3 899 192 111 0 0 chr15 41264606 41264642 -62230332 + (A)n Simple_repeat Simple_repeat 1 36 0 3 899 270 56 0 0 chr15 41264979 41265015 -62229959 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 3 899 6764 109 25 7 chr15 41265084 41266186 -62228788 + Lx LINE L1 5529 6649 -5 3 899 225 162 29 14 chr15 41266255 41266324 -62228650 + (TTAA)n Simple_repeat Simple_repeat 4 73 0 3 899 246 245 21 0 chr15 41266325 41266419 -62228555 + (TTATA)n Simple_repeat Simple_repeat 5 100 0 3 899 483 134 0 0 chr15 41266531 41266613 -62228361 + (TGGA)n Simple_repeat Simple_repeat 4 85 0 3 899 29 60 0 0 chr15 41267226 41267276 -62227698 + AT_rich Low_complexity Low_complexity 1 50 0 3 899 232 288 0 29 chr15 41268030 41268098 -62226876 - MLT1-int LTR MaLR -942 429 364 3 899 26 0 0 0 chr15 41268807 41268833 -62226141 + AT_rich Low_complexity Low_complexity 1 26 0 3 899 396 341 38 34 chr15 41268928 41269137 -62225837 + Lx8 LINE L1 6823 7032 -441 3 899 569 61 12 0 chr15 41269139 41269221 -62225753 + (GA)n Simple_repeat Simple_repeat 2 84 0 3 899 1007 147 0 6 chr15 41272798 41272976 -62221998 + CT-rich Low_complexity Low_complexity 4 180 0 3 899 22 35 0 0 chr15 41273143 41273172 -62221802 + AT_rich Low_complexity Low_complexity 1 29 0 3 899 353 348 64 21 chr15 41273230 41273418 -62221556 - L1MD3 LINE L1 -121 7874 7679 3 899 267 93 74 0 chr15 41273458 41273512 -62221462 - Lx LINE L1 -8 6646 6589 3 899 498 262 57 88 chr15 41273505 41273836 -62221138 - L1MD3 LINE L1 -302 7693 7373 3 899 383 330 0 0 chr15 41275578 41275669 -62219305 - PB1D10 SINE Alu -19 98 8 3 899 240 41 82 0 chr15 41276032 41276081 -62218893 + (CAAA)n Simple_repeat Simple_repeat 4 56 0 3 899 341 110 19 57 chr15 41276380 41276486 -62218488 + (TCTCTG)n Simple_repeat Simple_repeat 2 103 0 3 899 186 323 48 103 chr15 41277571 41277716 -62217258 + MIR3 SINE MIR 45 181 -27 3 899 198 171 0 0 chr15 41281176 41281217 -62213757 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 899 303 192 0 0 chr15 41281340 41281418 -62213556 + T-rich Low_complexity Low_complexity 1 78 0 3 899 271 348 74 22 chr15 41282250 41282385 -62212589 + MER20 DNA MER1_type 56 197 -22 3 899 703 226 102 5 chr15 41282706 41282902 -62212072 + B3 SINE B2 2 216 0 3 899 447 19 0 0 chr15 41284263 41284315 -62210659 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 899 253 312 26 13 chr15 41286980 41287058 -62207916 + ID4_ SINE ID 3 81 -2 3 899 243 79 0 0 chr15 41287436 41287474 -62207500 + (TTA)n Simple_repeat Simple_repeat 2 39 0 3 900 417 333 96 9 chr15 41289128 41289358 -62205616 + Charlie4a DNA MER1_type 19 268 -240 3 900 1294 200 87 0 chr15 41289529 41289864 -62205110 + Lx9 LINE L1 7265 7628 -16 3 900 182 159 0 43 chr15 41293816 41293862 -62201112 + C-rich Low_complexity Low_complexity 4 47 0 3 900 280 324 39 0 chr15 41293869 41293971 -62201003 - PB1D10 SINE Alu -6 111 6 3 900 346 267 60 22 chr15 41293982 41294116 -62200858 - Tigger7 DNA MER2_type -94 2397 2259 4 900 254 262 49 24 chr15 41294120 41294202 -62200772 - Tigger7 DNA MER2_type -2398 93 10 4 900 653 288 45 8 chr15 41295430 41295672 -62199302 - Lx9 LINE L1 -203 7441 7191 4 900 1668 169 57 89 chr15 41296151 41296522 -62198452 - ORR1B2 LTR MaLR -8 359 1 4 900 1017 110 0 0 chr15 41296971 41297134 -62197840 + (TTTCC)n Simple_repeat Simple_repeat 5 167 0 4 900 628 319 103 14 chr15 41299501 41300596 -62194378 + L1MA5 LINE L1 4633 5839 -461 4 900 216 0 0 0 chr15 41300596 41300620 -62194354 + (CAT)n Simple_repeat Simple_repeat 3 26 0 4 900 516 313 89 23 chr15 41300620 41300708 -62194266 + L1MA5 LINE L1 5840 5935 -365 4 900 1142 43 7 0 chr15 41300828 41300967 -62194007 + B1_Mus1 SINE Alu 1 140 -8 4 900 200 56 83 0 chr15 41300972 41301008 -62193966 + (CAAAA)n Simple_repeat Simple_repeat 1 39 0 4 900 339 44 0 0 chr15 41301008 41301053 -62193921 + (CCA)n Simple_repeat Simple_repeat 2 46 0 4 900 5114 24 10 0 chr15 41301281 41301876 -62193098 + L1Md_F3 LINE L1 5981 6581 -3 4 900 22 35 0 0 chr15 41303804 41303833 -62191141 + AT_rich Low_complexity Low_complexity 1 29 0 4 900 222 320 50 30 chr15 41304033 41304133 -62190841 - BC1_Mm scRNA scRNA -50 102 1 4 900 868 156 121 0 chr15 41304391 41304564 -62190410 - B2_Mm2 SINE B2 0 195 2 4 900 1069 65 0 0 chr15 41305241 41305379 -62189595 + B1_Mus1 SINE Alu 3 140 -8 4 900 193 0 29 59 chr15 41305381 41305415 -62189559 + (GAAA)n Simple_repeat Simple_repeat 3 35 0 4 900 502 248 85 8 chr15 41305955 41306085 -62188889 - B1_Mur3 SINE Alu -9 140 1 4 900 21 36 0 0 chr15 41306706 41306734 -62188240 + AT_rich Low_complexity Low_complexity 1 28 0 4 900 476 158 41 8 chr15 41306903 41307024 -62187950 + Lx9 LINE L1 7519 7643 -1 4 900 543 272 7 39 chr15 41307192 41307345 -62187629 + RSINE1 SINE B4 3 150 -15 4 900 21 36 0 0 chr15 41307446 41307474 -62187500 + AT_rich Low_complexity Low_complexity 1 28 0 4 900 21 36 0 0 chr15 41307992 41308020 -62186954 + AT_rich Low_complexity Low_complexity 1 28 0 4 900 221 151 19 0 chr15 41308231 41308284 -62186690 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 900 426 309 45 132 chr15 41308324 41308611 -62186363 - B4A SINE B4 -30 262 1 4 900 387 300 42 49 chr15 41310153 41310404 -62184570 + L1ME3 LINE L1 5892 6144 -20 4 900 25 0 0 0 chr15 41310642 41310667 -62184307 + AT_rich Low_complexity Low_complexity 1 25 0 4 900 8364 97 57 7 chr15 41310825 41312138 -62182836 - L1_Mus4 LINE L1 -4 6632 5251 4 900 4777 54 2 3 chr15 41312138 41312734 -62182240 - L1Md_F2 LINE L1 0 6582 5988 4 900 8364 140 10 20 chr15 41312734 41313570 -62181404 - L1_Mus4 LINE L1 -633 5250 4427 4 900 717 204 0 0 chr15 41313564 41313701 -62181273 - L1VL4 LINE L1 -6133 169 33 4 900 615 281 109 30 chr15 41313706 41314109 -62180865 - L1MA4A LINE L1 -364 5939 5505 4 900 617 290 33 37 chr15 41314260 41314475 -62180499 + B3 SINE B2 1 214 -2 4 900 773 289 195 25 chr15 41314530 41315526 -62179448 - L1MA4A LINE L1 -864 5279 4115 4 900 22 0 0 0 chr15 41315685 41315707 -62179267 + AT_rich Low_complexity Low_complexity 1 22 0 4 900 1027 293 108 82 chr15 41316296 41316787 -62178187 - MLT2B2 LTR ERVL -10 505 2 4 900 30 0 0 0 chr15 41317145 41317175 -62177799 + AT_rich Low_complexity Low_complexity 1 30 0 4 900 829 137 34 0 chr15 41317677 41317823 -62177151 - Lx2 LINE L1 -1 6996 6846 4 900 510 286 101 57 chr15 41317837 41318330 -62176644 - Lx8 LINE L1 -59 7414 6900 4 900 29 0 0 0 chr15 41318944 41318973 -62176001 + AT_rich Low_complexity Low_complexity 1 29 0 4 900 861 88 0 0 chr15 41319045 41319182 -62175792 + (CA)n Simple_repeat Simple_repeat 2 138 0 4 900 300 219 26 40 chr15 41319193 41319269 -62175705 + MLT1A0 LTR MaLR 289 363 -2 4 900 263 322 211 25 chr15 41319273 41319477 -62175497 - MLT1F2 LTR MaLR -71 489 248 4 900 321 135 0 0 chr15 41321029 41321081 -62173893 + (A)n Simple_repeat Simple_repeat 1 52 0 4 900 220 312 40 104 chr15 41321627 41321752 -62173222 - MIR SINE MIR -124 144 28 4 900 871 232 56 0 chr15 41322000 41322198 -62172776 - B3 SINE B2 -4 212 4 4 900 223 376 10 31 chr15 41322932 41323028 -62171946 + ID_B1 SINE B4 84 177 -47 4 900 278 369 24 0 chr15 41323008 41323092 -62171882 + ID_B1 SINE B4 64 149 -75 4 900 219 349 24 114 chr15 41323028 41323151 -62171823 + PB1D10 SINE Alu 5 116 -1 4 900 245 304 0 0 chr15 41324401 41324457 -62170517 - ID4 SINE ID -24 59 4 4 900 564 116 0 0 chr15 41324727 41324813 -62170161 + (TA)n Simple_repeat Simple_repeat 2 87 0 4 900 594 63 0 0 chr15 41325980 41326059 -62168915 + (TCCC)n Simple_repeat Simple_repeat 3 81 0 4 900 2022 137 12 12 chr15 41326258 41326577 -62168397 + ORR1A3 LTR MaLR 8 326 0 4 900 441 0 0 0 chr15 41327697 41327746 -62167228 + (GA)n Simple_repeat Simple_repeat 1 49 0 4 900 4511 53 0 9 chr15 41328226 41328802 -62166172 + L1Md_F2 LINE L1 6012 6582 0 4 900 249 33 0 0 chr15 41328829 41328859 -62166115 + (A)n Simple_repeat Simple_repeat 1 30 0 4 900 333 258 0 49 chr15 41328994 41329006 -62165968 + MT2B LTR ERVL 168 218 -383 4 900 359 150 122 24 chr15 41329006 41329088 -62165886 + RLTR25B LTR ERVK 420 509 -519 4 900 822 73 0 0 chr15 41329021 41329131 -62165843 + B1_Mus1 SINE Alu 39 148 0 4 900 282 280 0 51 chr15 41329137 41329216 -62165758 - ID4_ SINE ID -8 75 1 4 900 680 281 0 72 chr15 41329285 41329451 -62165523 + B3A SINE B2 3 159 -39 4 900 477 0 0 0 chr15 41329451 41329504 -62165470 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 900 680 281 0 72 chr15 41329504 41329544 -62165430 + B3A SINE B2 160 194 -4 4 900 29 0 0 0 chr15 41330298 41330327 -62164647 + AT_rich Low_complexity Low_complexity 1 29 0 4 900 323 245 0 9 chr15 41331055 41331166 -62163808 + CT-rich Low_complexity Low_complexity 3 112 0 4 900 354 318 78 26 chr15 41331644 41331912 -62163062 - L2a LINE L2 -222 3204 2923 4 900 306 0 0 0 chr15 41334145 41334179 -62160795 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 900 183 284 58 69 chr15 41334602 41334689 -62160285 + MIR SINE MIR 106 191 -71 4 900 21 0 0 0 chr15 41336042 41336063 -62158911 + AT_rich Low_complexity Low_complexity 1 21 0 4 900 954 326 65 25 chr15 41336507 41337136 -62157838 - L1MB5 LINE L1 -2 6172 5519 4 900 247 308 58 0 chr15 41337376 41337496 -62157478 - L1MB5 LINE L1 -1063 5083 4957 4 900 547 301 44 81 chr15 41337915 41338298 -62156676 - L1MB5 LINE L1 -1756 4390 4022 4 900 223 70 0 104 chr15 41338737 41338785 -62156189 + T-rich Low_complexity Low_complexity 1 43 0 4 900 190 268 17 51 chr15 41338882 41338941 -62156033 + L2 LINE L2 2822 2878 -541 4 900 402 69 0 0 chr15 41339018 41339076 -62155898 + (TC)n Simple_repeat Simple_repeat 2 59 0 4 900 351 0 0 0 chr15 41339078 41339117 -62155857 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 900 3109 56 0 12 chr15 41339734 41340135 -62154839 + MTA_Mm LTR MaLR 1 396 0 4 900 554 298 23 96 chr15 41341924 41342143 -62152831 - B3A SINE B2 -7 209 7 4 900 518 358 70 0 chr15 41342134 41342335 -62152639 - B4 SINE B4 -67 225 11 4 900 1630 228 21 31 chr15 41342404 41342793 -62152181 - Lx7 LINE L1 -1151 6545 6161 4 900 1527 204 3 16 chr15 41342801 41343119 -62151855 - L1_Mur3 LINE L1 -1736 4144 3831 4 900 6044 181 73 43 chr15 41343110 41343470 -62151504 - L1_Mur3 LINE L1 -2753 3127 2772 4 900 1952 188 61 5 chr15 41343470 41343866 -62151108 - MTC LTR MaLR -2 419 2 4 900 6044 181 73 43 chr15 41343866 41345095 -62149879 - L1_Mur3 LINE L1 -3109 2771 1491 4 900 4580 144 14 7 chr15 41345293 41346033 -62148941 - Lx2B LINE L1 -1 6999 6255 4 900 814 235 76 127 chr15 41346049 41346636 -62148338 - L1_Mur3 LINE L1 -6710 1018 301 4 900 22 0 0 0 chr15 41347648 41347670 -62147304 + AT_rich Low_complexity Low_complexity 1 22 0 4 900 21 0 0 0 chr15 41348516 41348537 -62146437 + AT_rich Low_complexity Low_complexity 1 21 0 4 900 510 235 0 0 chr15 41348713 41348862 -62146112 + (CA)n Simple_repeat Simple_repeat 2 150 0 4 900 618 231 173 24 chr15 41349308 41349557 -62145417 - Lx9 LINE L1 -10 7634 7349 4 900 534 133 0 0 chr15 41349560 41349650 -62145324 + (TCTG)n Simple_repeat Simple_repeat 2 91 0 4 900 285 29 0 0 chr15 41351296 41351330 -62143644 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 900 723 252 13 91 chr15 41352611 41352842 -62142132 + ID_B1 SINE B4 4 216 -8 4 900 194 0 0 37 chr15 41352843 41352870 -62142104 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 4 900 26 30 0 0 chr15 41352932 41352965 -62142009 + AT_rich Low_complexity Low_complexity 1 33 0 4 900 22 0 0 0 chr15 41355242 41355264 -62139710 + AT_rich Low_complexity Low_complexity 1 22 0 4 900 284 373 135 46 chr15 41355961 41356287 -62138687 - L4 LINE RTE -314 1715 1361 4 900 261 245 49 114 chr15 41356795 41356979 -62137995 - ORR1E LTR MaLR -111 248 77 4 900 440 334 168 46 chr15 41357362 41357722 -62137252 + MLT1J LTR MaLR 1 410 -102 4 900 317 43 21 0 chr15 41357722 41357769 -62137205 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 4 900 440 334 168 46 chr15 41357769 41357800 -62137174 + MLT1J LTR MaLR 411 440 -72 4 900 437 154 0 11 chr15 41358081 41358173 -62136801 + (TA)n Simple_repeat Simple_repeat 1 91 0 4 900 189 0 0 0 chr15 41358182 41358203 -62136771 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 900 360 0 0 0 chr15 41358205 41358245 -62136729 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 900 15467 159 83 15 chr15 41358254 41362843 -62132131 - Lx2 LINE L1 -1 6996 2071 4 900 9810 40 10 5 chr15 41362832 41364729 -62130245 - L1Md_F3 LINE L1 -1 6583 4677 4 900 364 94 0 0 chr15 41364725 41364778 -62130196 + L1Md_F3 LINE L1 4602 4654 -1229 4 900 4645 179 59 19 chr15 41364778 41366427 -62128547 - L1VL2 LINE L1 -1824 1791 64 4 900 315 313 138 5 chr15 41367551 41367747 -62127227 - Lx9 LINE L1 -169 7475 7254 4 900 288 0 0 0 chr15 41367811 41367843 -62127131 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4 900 210 37 0 0 chr15 41368395 41368422 -62126552 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 4 900 21 57 0 0 chr15 41368509 41368544 -62126430 + AT_rich Low_complexity Low_complexity 1 35 0 4 900 650 336 117 4 chr15 41368685 41368924 -62126050 + B4A SINE B4 27 292 0 5 900 236 273 0 29 chr15 41369012 41369080 -62125894 + GA-rich Low_complexity Low_complexity 1 66 0 5 900 1163 48 0 7 chr15 41369988 41370136 -62124838 - B1_Mus2 SINE Alu 0 147 1 5 900 387 321 52 35 chr15 41370494 41370610 -62124364 + RSINE1 SINE B4 48 165 0 5 900 341 295 124 17 chr15 41371491 41371687 -62123287 - MIR SINE MIR -24 244 36 5 900 424 312 14 9 chr15 41371943 41372085 -62122889 - ID_B1 SINE B4 -68 224 86 5 900 225 65 0 0 chr15 41372127 41372158 -62122816 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 5 900 318 309 72 9 chr15 41372372 41372483 -62122491 + PB1D9 SINE Alu 3 120 0 5 900 5738 105 26 7 chr15 41373977 41374331 -62120643 + Lx LINE L1 5772 6133 -521 5 900 2959 46 62 0 chr15 41374331 41374636 -62120338 + MTA_Mm LTR MaLR 1 309 -87 5 900 342 67 0 0 chr15 41374636 41374681 -62120293 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 5 900 2959 46 62 0 chr15 41374681 41374748 -62120226 + MTA_Mm LTR MaLR 310 395 -1 5 900 5738 105 26 7 chr15 41374748 41375254 -62119720 + Lx LINE L1 6134 6647 -7 5 900 303 234 120 51 chr15 41375860 41375977 -62118997 + MLT1A1 LTR MaLR 271 395 -13 5 900 23 33 0 0 chr15 41377826 41377856 -62117118 + AT_rich Low_complexity Low_complexity 1 30 0 5 900 513 49 37 0 chr15 41378022 41378103 -62116871 + (CA)n Simple_repeat Simple_repeat 2 85 0 5 900 234 280 116 25 chr15 41379137 41379258 -62115716 + Charlie18a DNA MER1_type 140 271 -71 5 900 182 222 0 0 chr15 41381896 41381932 -62113042 - L2c LINE L2 -4 3383 3348 5 900 392 278 10 10 chr15 41383009 41383107 -62111867 + MER5A DNA MER1_type 87 184 -5 5 900 227 377 104 12 chr15 41383141 41383305 -62111669 - L4 LINE RTE -1211 818 640 5 900 333 313 37 6 chr15 41383448 41383612 -62111362 - L1MB8 LINE L1 -1 6183 6015 5 900 790 278 9 9 chr15 41383642 41383856 -62111118 - B3 SINE B2 -2 214 1 5 900 733 299 44 11 chr15 41383918 41384283 -62110691 - L1MB8 LINE L1 -201 5977 5601 5 900 868 145 0 33 chr15 41385355 41385505 -62109469 + B1_Mur4 SINE Alu 1 145 -5 5 900 250 309 79 37 chr15 41385850 41386014 -62108960 + MIR3 SINE MIR 16 185 -23 5 900 261 0 0 0 chr15 41387218 41387247 -62107727 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 900 218 294 44 51 chr15 41387922 41388076 -62106898 - MIRm SINE MIR -59 217 64 5 900 333 0 0 0 chr15 41388561 41388598 -62106376 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 900 477 0 0 0 chr15 41388598 41388650 -62106324 + (GA)n Simple_repeat Simple_repeat 2 54 0 5 900 251 344 92 24 chr15 41389035 41389199 -62105775 - MIR SINE MIR -4 258 84 5 900 183 80 0 0 chr15 41389933 41389958 -62105016 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 5 900 3260 223 36 12 chr15 41390879 41391789 -62103185 - Lx6 LINE L1 -996 6464 5515 5 900 1595 286 119 10 chr15 41391793 41392236 -62102738 + Lx6 LINE L1 6789 7292 -168 5 900 1131 119 0 0 chr15 41392236 41392412 -62102562 + (TCTCCC)n Simple_repeat Simple_repeat 3 178 0 5 900 1595 286 119 10 chr15 41392412 41392571 -62102403 + Lx6 LINE L1 7293 7457 -3 5 900 685 225 28 7 chr15 41394532 41394675 -62100299 - B1_Mus1 SINE Alu -2 146 1 5 900 628 359 86 21 chr15 41394816 41395189 -62099785 - MLT1C LTR MaLR 0 467 71 5 900 284 286 0 14 chr15 41395341 41395412 -62099562 - PB1D10 SINE Alu -8 109 40 5 900 437 262 0 18 chr15 41396809 41396918 -62098056 + PB1D10 SINE Alu 10 116 -1 5 900 36 0 0 0 chr15 41397836 41397872 -62097102 + AT_rich Low_complexity Low_complexity 1 36 0 5 900 423 56 0 0 chr15 41397914 41397968 -62097006 + (CTTG)n Simple_repeat Simple_repeat 2 55 0 5 900 307 264 18 103 chr15 41398080 41398245 -62096729 - Lx6 LINE L1 -2 7458 7308 5 900 5895 233 65 25 chr15 41399285 41399312 -62095662 - Lx6 LINE L1 -174 7286 7262 5 900 432 0 0 0 chr15 41399312 41399360 -62095614 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 900 5895 233 65 25 chr15 41399360 41399862 -62095112 - Lx6 LINE L1 -199 7261 6738 5 900 507 107 0 0 chr15 41399862 41399937 -62095037 + (TCTA)n Simple_repeat Simple_repeat 2 76 0 5 900 5895 206 39 45 chr15 41399937 41401578 -62093396 - Lx6 LINE L1 -723 6737 5051 5 900 1140 28 14 20 chr15 41401578 41401724 -62093250 + B1_Mus2 SINE Alu 3 147 0 5 900 4025 181 13 66 chr15 41401724 41401859 -62093115 - Lx6 LINE L1 -830 5050 4960 5 900 3080 172 61 52 chr15 41401864 41402688 -62092286 - Lx6 LINE L1 -2432 3448 2618 5 900 9520 88 9 12 chr15 41402691 41404498 -62090476 - Lx3_Mus LINE L1 -5 7004 5212 5 900 763 256 9 46 chr15 41404498 41404931 -62090043 - Lx6 LINE L1 -4486 1394 1009 5 900 778 125 20 34 chr15 41405556 41405705 -62089269 + RLTR31A_Mm LTR ERVK 1 147 -437 5 900 895 246 34 68 chr15 41405706 41405999 -62088975 + RLTR31_Mm LTR ERVK 279 561 0 5 900 3866 53 0 0 chr15 41406077 41406552 -62088422 - L1Md_F2 LINE L1 -12 6570 6096 5 900 1415 236 87 6 chr15 41406734 41407067 -62087907 + ORR1D2 LTR MaLR 4 363 -7 5 900 1491 91 17 17 chr15 41407073 41407309 -62087665 + L1_Mus3 LINE L1 6398 6633 -5 5 900 377 270 57 46 chr15 41407331 41407525 -62087449 - ERVL-B4-int LTR ERVL -3058 2656 2461 5 900 22 0 0 0 chr15 41407572 41407594 -62087380 + AT_rich Low_complexity Low_complexity 1 22 0 5 900 27 0 0 0 chr15 41407672 41407699 -62087275 + AT_rich Low_complexity Low_complexity 1 27 0 5 900 237 369 99 6 chr15 41407908 41408069 -62086905 - MIR SINE MIR -83 179 4 5 900 1917 182 11 106 chr15 41408144 41408224 -62086750 + MTC LTR MaLR 1 78 -343 5 900 1189 62 0 0 chr15 41408224 41408369 -62086605 + B1_Mus1 SINE Alu 2 146 -2 5 900 1917 182 11 106 chr15 41408369 41408414 -62086560 + MTC LTR MaLR 79 85 -336 5 900 696 83 0 0 chr15 41408414 41408510 -62086464 + (GA)n Simple_repeat Simple_repeat 1 96 0 5 900 1917 182 11 106 chr15 41408510 41408844 -62086130 + MTC LTR MaLR 86 417 -4 5 900 285 250 37 103 chr15 41408905 41409012 -62085962 + PB1D10 SINE Alu 17 116 -1 5 900 748 72 8 8 chr15 41409124 41409250 -62085724 + (TAGA)n Simple_repeat Simple_repeat 4 129 0 5 900 358 62 15 45 chr15 41409275 41409342 -62085632 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 900 203 349 21 41 chr15 41409870 41409968 -62085006 - MIRc SINE MIR -105 157 64 5 900 1272 77 0 0 chr15 41410578 41410799 -62084175 + (TCTA)n Simple_repeat Simple_repeat 1 221 0 5 900 24 32 0 0 chr15 41412148 41412179 -62082795 + AT_rich Low_complexity Low_complexity 1 31 0 5 900 253 325 61 24 chr15 41412234 41412316 -62082658 + ZP3AR Satellite Satellite 19 103 -109 5 900 358 306 10 0 chr15 41415937 41416035 -62078939 - B3A SINE B2 -97 101 3 5 900 1198 112 96 0 chr15 41416050 41416247 -62078727 - L1_Mus3 LINE L1 -7 6631 6416 5 900 263 261 14 28 chr15 41416996 41417067 -62077907 - PB1D10 SINE Alu 0 117 48 5 900 233 261 99 56 chr15 41417559 41417721 -62077253 - Lx8 LINE L1 -3 7470 7302 5 112 352 237 38 85 chr15 41418692 41418798 -62076176 + PB1D7 SINE Alu 20 120 0 5 901 237 214 202 58 chr15 41419106 41419210 -62075764 + MamGypLTR3 LTR Gypsy 448 566 -273 5 901 812 332 23 53 chr15 41420347 41420777 -62074197 - Lx8 LINE L1 -132 7341 6925 5 901 301 218 0 0 chr15 41421432 41421487 -62073487 + L1VL1 LINE L1 27 81 -6341 5 901 2864 98 19 19 chr15 41421492 41421971 -62073003 + MusHAL1 LINE L1 520 998 -1714 5 901 17245 123 12 15 chr15 41421976 41423446 -62071528 + L1_Mus3 LINE L1 2958 4442 -1441 5 901 1553 57 0 0 chr15 41423446 41423638 -62071336 + B2_Mm1t SINE B2 2 193 0 5 901 17245 104 12 14 chr15 41423638 41425849 -62069125 + L1_Mus3 LINE L1 4443 6638 0 5 901 228 305 66 9 chr15 41426484 41426590 -62068384 + MER3 DNA MER1_type 97 208 -1 5 901 285 307 40 0 chr15 41427470 41427545 -62067429 - B4A SINE B4 -213 79 2 5 901 453 50 0 0 chr15 41428332 41428392 -62066582 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 5 901 237 312 45 18 chr15 41428406 41428517 -62066457 - ORR1E LTR MaLR -17 342 229 5 901 268 313 30 10 chr15 41428605 41428705 -62066269 - ORR1E LTR MaLR -250 109 8 5 901 654 126 0 0 chr15 41428712 41428815 -62066159 + (TG)n Simple_repeat Simple_repeat 2 104 0 5 901 21 0 0 0 chr15 41428963 41428984 -62065990 + AT_rich Low_complexity Low_complexity 1 21 0 5 901 888 283 63 24 chr15 41429940 41430447 -62064527 + L1MA6 LINE L1 5386 5912 -388 5 901 536 0 16 0 chr15 41430800 41430864 -62064110 + (TG)n Simple_repeat Simple_repeat 1 65 0 5 901 28 91 0 0 chr15 41432109 41432186 -62062788 + AT_rich Low_complexity Low_complexity 1 77 0 5 901 1283 73 51 0 chr15 41432311 41432488 -62062486 + B2_Mm1t SINE B2 2 187 -6 5 901 254 263 50 50 chr15 41434183 41434283 -62060691 + PB1D10 SINE Alu 2 101 -16 5 901 194 62 31 0 chr15 41434397 41434429 -62060545 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 5 901 342 0 0 0 chr15 41434603 41434641 -62060333 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 901 200 105 79 0 chr15 41435079 41435117 -62059857 + T-rich Low_complexity Low_complexity 1 41 0 5 901 25 31 0 0 chr15 41435254 41435286 -62059688 + AT_rich Low_complexity Low_complexity 1 32 0 5 901 1381 185 148 11 chr15 41435289 41435655 -62059319 - Lx9 LINE L1 0 7644 7229 5 901 793 207 84 25 chr15 41435656 41435902 -62059072 - ORR1D1 LTR MaLR -1 373 78 5 901 264 237 171 0 chr15 41435845 41435921 -62059053 - RSINE1 SINE B4 -74 91 3 5 901 375 23 0 0 chr15 41436050 41436094 -62058880 + (TC)n Simple_repeat Simple_repeat 1 44 0 5 901 2170 227 96 45 chr15 41436167 41436303 -62058671 - Lx7 LINE L1 -1 7695 7532 5 901 219 69 0 0 chr15 41436303 41436332 -62058642 + (TAA)n Simple_repeat Simple_repeat 2 30 0 5 901 2170 227 96 45 chr15 41436332 41436902 -62058072 - Lx7 LINE L1 -165 7531 6954 5 901 643 297 25 25 chr15 41438391 41438588 -62056386 - B3A SINE B2 0 198 2 5 901 1127 122 124 30 chr15 41438657 41438859 -62056115 - URR1A DNA MER1_type -5 221 1 5 901 28 0 0 0 chr15 41439936 41439964 -62055010 + AT_rich Low_complexity Low_complexity 1 28 0 5 901 411 38 0 0 chr15 41440024 41440077 -62054897 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 901 216 0 0 0 chr15 41441053 41441077 -62053897 + (A)n Simple_repeat Simple_repeat 1 24 0 5 901 308 313 143 54 chr15 41441809 41442180 -62052794 - Kanga1 DNA Tc2 -42 1703 1300 5 901 351 121 61 0 chr15 41442308 41442407 -62052567 + (TAGA)n Simple_repeat Simple_repeat 3 107 0 5 901 666 238 79 19 chr15 41442652 41442866 -62052108 - L1MA5 LINE L1 -5 6295 6069 6 901 190 337 29 48 chr15 41443928 41444031 -62050943 - MIR SINE MIR -90 118 18 6 901 813 189 200 0 chr15 41445231 41445411 -62049563 - B3 SINE B2 0 216 1 6 901 24 77 0 0 chr15 41446044 41446096 -62048878 + AT_rich Low_complexity Low_complexity 1 52 0 6 901 5194 38 8 2 chr15 41446337 41446965 -62048009 + L1Md_F2 LINE L1 5937 6568 -14 6 901 234 363 146 11 chr15 41447052 41447339 -62047635 + L3 LINE CR1 4128 4453 -36 6 901 234 0 0 0 chr15 41448079 41448105 -62046869 + (CAG)n Simple_repeat Simple_repeat 1 26 0 6 901 185 345 145 8 chr15 41448191 41448308 -62046666 + MIR SINE MIR 20 152 -110 6 901 297 341 92 31 chr15 41448817 41448947 -62046027 - ID_B1 SINE B4 -2 222 85 6 901 829 259 104 23 chr15 41449057 41449365 -62045609 - L2 LINE L2 -781 2638 2306 6 901 369 281 74 10 chr15 41449427 41449651 -62045323 + L1M2 LINE L1 4099 4339 -1541 6 901 373 209 45 9 chr15 41449634 41449745 -62045229 + L1_Mm LINE L1 4445 4559 -1324 6 901 323 294 60 60 chr15 41449758 41449990 -62044984 + L1M2 LINE L1 4721 4952 -1191 6 901 379 298 140 14 chr15 41450271 41450628 -62044346 - L1MC4a LINE L1 -13 7869 7468 6 901 210 268 14 0 chr15 41450701 41450772 -62044202 + (TA)n Simple_repeat Simple_repeat 2 73 0 6 901 246 95 0 0 chr15 41453110 41453152 -62041822 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 6 901 189 154 0 0 chr15 41453888 41453927 -62041047 + (CATATA)n Simple_repeat Simple_repeat 3 41 0 6 901 766 134 71 0 chr15 41454281 41454408 -62040566 - B1_Mus1 SINE Alu -10 138 3 6 901 302 77 0 0 chr15 41456213 41456252 -62038722 + HAL1-3A_ME LINE L1 1974 2012 -846 6 901 1344 251 30 19 chr15 41457795 41458188 -62036786 - RLTR18B LTR ERVK -5 507 135 6 901 1144 233 43 53 chr15 41458160 41458464 -62036510 - RLTR18B LTR ERVK -309 307 7 6 901 1056 262 51 54 chr15 41458920 41459271 -62035703 - ORR1E LTR MaLR 0 359 10 6 901 180 0 0 0 chr15 41460003 41460023 -62034951 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 901 1493 68 5 0 chr15 41460318 41460524 -62034450 + L1Md_F2 LINE L1 3750 3956 -1927 6 901 9288 67 0 4 chr15 41460524 41461795 -62033179 + L1Md_F2 LINE L1 4321 5586 -297 6 901 8198 47 1 0 chr15 41461795 41462790 -62032184 + L1Md_F2 LINE L1 5587 6582 0 6 901 192 40 0 0 chr15 41464197 41464222 -62030752 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 901 211 227 0 0 chr15 41464222 41464266 -62030708 + GA-rich Low_complexity Low_complexity 1 44 0 6 901 552 200 12 6 chr15 41465344 41465510 -62029464 + (TG)n Simple_repeat Simple_repeat 2 168 0 6 901 255 31 0 0 chr15 41466360 41466392 -62028582 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 901 477 0 0 0 chr15 41467405 41467458 -62027516 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 901 522 0 0 0 chr15 41467458 41467515 -62027459 + (TA)n Simple_repeat Simple_repeat 2 59 0 6 901 364 279 12 0 chr15 41469994 41470080 -62024894 + B4A SINE B4 1 87 -205 6 901 475 358 47 52 chr15 41470127 41470339 -62024635 + B4A SINE B4 63 273 -19 6 901 856 0 9 9 chr15 41470339 41470444 -62024530 + (TTCTC)n Simple_repeat Simple_repeat 5 109 0 6 901 516 106 0 0 chr15 41470447 41470541 -62024433 + (TC)n Simple_repeat Simple_repeat 1 94 0 6 901 403 305 126 56 chr15 41470759 41471061 -62023913 + LTR78 LTR ERV1 474 796 -508 6 901 231 61 0 0 chr15 41472124 41472157 -62022817 + (CAGAGA)n Simple_repeat Simple_repeat 3 35 0 6 901 236 308 180 107 chr15 41472169 41472395 -62022579 - B4 SINE B4 -11 281 56 6 901 256 290 43 0 chr15 41472504 41472573 -62022401 - PB1D9 SINE Alu -48 72 1 6 901 246 341 91 0 chr15 41472680 41472706 -62022268 - BC1_Mm scRNA scRNA -51 101 7 6 901 303 279 49 0 chr15 41472706 41472767 -62022207 - tRNA-Ala-GCY_ tRNA tRNA -11 64 1 6 901 26 64 0 0 chr15 41472812 41472859 -62022115 + AT_rich Low_complexity Low_complexity 1 47 0 6 901 194 349 24 24 chr15 41473732 41473817 -62021157 - MIRb SINE MIR -180 88 4 6 901 256 304 43 0 chr15 41474100 41474169 -62020805 - L2b LINE L2 -7 3368 3297 6 901 316 328 70 22 chr15 41475784 41476012 -62018962 - MIR SINE MIR -5 263 21 6 901 616 306 124 42 chr15 41476071 41476402 -62018572 - ORR1D2 LTR MaLR -5 365 8 6 901 1189 55 0 7 chr15 41478330 41478478 -62016496 + B1_Mus2 SINE Alu 1 147 0 6 901 11257 158 246 13 chr15 41478897 41479162 -62015812 - L1_Mur3 LINE L1 -353 5527 5256 6 901 356 103 17 0 chr15 41479162 41479220 -62015754 + (TA)n Simple_repeat Simple_repeat 1 59 0 6 901 11257 158 246 13 chr15 41479220 41479678 -62015296 - L1_Mur3 LINE L1 -625 5255 4747 6 901 270 0 0 0 chr15 41479678 41479708 -62015266 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 901 11257 158 246 13 chr15 41479708 41481100 -62013874 - L1_Mur3 LINE L1 -1134 4746 2795 6 901 293 0 27 0 chr15 41481100 41481137 -62013837 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 6 901 11257 158 246 13 chr15 41481137 41482041 -62012933 - L1_Mur3 LINE L1 -3086 2794 1806 6 901 1327 197 70 6 chr15 41482048 41482406 -62012568 - L1_Mur3 LINE L1 -6384 1344 964 6 901 1260 251 70 38 chr15 41482411 41482913 -62012061 - L1_Mur3 LINE L1 -6913 815 298 6 901 267 332 81 0 chr15 41483081 41483292 -62011682 - L1M5 LINE L1 -554 5619 5392 6 901 666 337 27 19 chr15 41484059 41484319 -62010655 + B4A SINE B4 1 262 -30 6 901 360 0 0 0 chr15 41484380 41484420 -62010554 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 901 299 298 29 0 chr15 41484562 41484666 -62010308 - PB1D10 SINE Alu -8 109 3 6 901 21 71 0 0 chr15 41486213 41486255 -62008719 + AT_rich Low_complexity Low_complexity 1 42 0 6 901 252 319 30 30 chr15 41486965 41487130 -62007844 + (TATATG)n Simple_repeat Simple_repeat 6 170 0 6 901 590 258 260 9 chr15 41487144 41487371 -62007603 - B4A SINE B4 -8 284 1 6 901 1310 223 152 106 chr15 41487686 41487722 -62007252 - MT2A LTR ERVL -71 462 430 6 901 1367 196 103 4 chr15 41487722 41488003 -62006971 - RLTR27 LTR ERVK 0 309 1 6 901 1310 223 152 106 chr15 41488003 41488408 -62006566 - MT2A LTR ERVL -104 429 1 6 901 524 139 45 28 chr15 41489358 41489535 -62005439 + CT-rich Low_complexity Low_complexity 1 180 0 6 901 259 172 149 92 chr15 41489542 41489683 -62005291 - RLTR25B LTR ERVK -137 891 743 6 901 3727 196 59 14 chr15 41489761 41490586 -62004388 - RLTR25B LTR ERVK -166 862 1 6 901 339 25 0 0 chr15 41490817 41490857 -62004117 + (TC)n Simple_repeat Simple_repeat 1 40 0 6 901 3144 118 70 26 chr15 41490864 41491394 -62003580 + RMER2 LTR ERV1 8 560 -7 6 901 512 116 12 0 chr15 41491394 41491480 -62003494 + (TC)n Simple_repeat Simple_repeat 2 88 0 6 901 300 316 46 23 chr15 41491557 41491732 -62003242 + MIR SINE MIR 77 255 -7 6 901 186 240 0 39 chr15 41492079 41492131 -62002843 - L3 LINE CR1 -4387 102 53 6 901 1563 42 0 10 chr15 41492178 41492372 -62002602 - B2_Mm1t SINE B2 0 193 2 6 901 1856 152 72 9 chr15 41492994 41493326 -62001648 + ORR1B1 LTR MaLR 42 394 0 6 901 3629 201 34 67 chr15 41493330 41494247 -62000727 + ORR1B1-int LTR MaLR 1 887 -1076 6 901 28 0 0 0 chr15 41494247 41494275 -62000699 + AT_rich Low_complexity Low_complexity 1 28 0 6 901 723 157 39 8 chr15 41494281 41494409 -62000565 + ORR1B1 LTR MaLR 255 386 -8 6 901 624 337 30 26 chr15 41494622 41494893 -62000081 + B4 SINE B4 3 274 -18 6 901 396 0 0 0 chr15 41494990 41495034 -61999940 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 901 510 17 0 0 chr15 41495034 41495093 -61999881 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 901 336 138 0 0 chr15 41496099 41496164 -61998810 + (TA)n Simple_repeat Simple_repeat 1 65 0 6 901 675 321 19 60 chr15 41497819 41498084 -61996890 + MTE2a LTR MaLR 3 256 -123 6 901 339 294 98 0 chr15 41498598 41498700 -61996274 + PB1D10 SINE Alu 1 112 -5 6 901 199 292 45 15 chr15 41499336 41499402 -61995572 + MIRb SINE MIR 193 260 -8 6 901 1801 144 8 77 chr15 41499638 41499991 -61994983 - ORR1A4 LTR MaLR 0 329 1 6 901 259 259 113 15 chr15 41500175 41500308 -61994666 - L1MC3 LINE L1 -160 7625 7480 1 901 219 167 0 0 chr15 41500466 41500508 -61994466 + CT-rich Low_complexity Low_complexity 2 43 0 2 901 1504 88 0 38 chr15 41502385 41502621 -61992353 - L1Md_F2 LINE L1 -12 6570 6344 3 901 2697 173 56 139 chr15 41502628 41503292 -61991682 - RMER19C LTR ERVK 0 611 3 4 901 199 360 101 0 chr15 41503678 41503767 -61991207 - MIRb SINE MIR -115 153 56 5 901 402 21 0 0 chr15 41504174 41504221 -61990753 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 901 348 311 87 39 chr15 41504723 41504850 -61990124 + RSINE1 SINE B4 3 135 -30 7 901 270 0 0 0 chr15 41504951 41504981 -61989993 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 901 469 256 93 37 chr15 41505165 41505327 -61989647 + B3 SINE B2 5 175 -20 9 901 630 0 0 0 chr15 41505496 41505566 -61989408 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 901 1152 64 0 0 chr15 41505568 41505709 -61989265 - B1_Mm SINE Alu -6 141 1 1 901 695 222 107 10 chr15 41505769 41505965 -61989009 + B3 SINE B2 2 216 0 1 901 23 54 0 0 chr15 41506036 41506073 -61988901 + AT_rich Low_complexity Low_complexity 1 37 0 1 901 425 308 53 42 chr15 41506405 41506595 -61988379 - B4A SINE B4 -100 192 1 1 901 1439 266 56 50 chr15 41507949 41508447 -61986527 - RLTR20B3 LTR ERVK -56 521 21 1 901 596 362 81 19 chr15 41508612 41508981 -61985993 - LTR33B LTR ERVL -19 484 93 1 901 23 33 0 0 chr15 41509824 41509854 -61985120 + AT_rich Low_complexity Low_complexity 1 30 0 1 901 261 0 0 0 chr15 41509856 41509885 -61985089 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1 901 282 56 0 0 chr15 41509885 41509921 -61985053 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 901 572 269 50 0 chr15 41509934 41510075 -61984899 - RSINE1 SINE B4 -14 151 4 2 901 1127 204 5 9 chr15 41510118 41510341 -61984633 + URR1B DNA MER1_type 1 222 -3 2 901 328 314 133 44 chr15 41510347 41510663 -61984311 - L1M4 LINE L1 -389 5785 5442 2 901 703 270 82 39 chr15 41510783 41511014 -61983960 - ORR1E LTR MaLR -4 355 115 2 901 833 29 0 0 chr15 41511483 41511585 -61983389 - L1Md_A LINE L1 -102 6480 6379 2 901 402 338 103 43 chr15 41511703 41511984 -61982990 - MLT1A0 LTR MaLR -18 347 50 2 901 26 0 0 0 chr15 41512437 41512463 -61982511 + AT_rich Low_complexity Low_complexity 1 26 0 2 901 1770 224 27 107 chr15 41512968 41513338 -61981636 - RMER15 LTR ERVL -96 479 157 2 901 546 29 0 0 chr15 41513338 41513406 -61981568 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 901 1770 224 27 107 chr15 41513406 41513549 -61981425 - RMER15 LTR ERVL -419 156 7 2 901 24 0 0 0 chr15 41514039 41514063 -61980911 + AT_rich Low_complexity Low_complexity 1 24 0 2 901 26 30 0 0 chr15 41514713 41514746 -61980228 + AT_rich Low_complexity Low_complexity 1 33 0 3 901 438 20 0 0 chr15 41515665 41515716 -61979258 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 901 2337 90 9 12 chr15 41516207 41516533 -61978441 - ORR1A3 LTR MaLR 0 326 2 3 901 1013 208 43 0 chr15 41516827 41517034 -61977940 + B3 SINE B2 1 216 0 3 901 43 56 0 0 chr15 41518415 41518486 -61976488 + AT_rich Low_complexity Low_complexity 1 71 0 3 901 32 67 0 0 chr15 41519194 41519254 -61975720 + AT_rich Low_complexity Low_complexity 1 60 0 3 901 240 204 0 0 chr15 41519294 41519338 -61975636 - Lx8 LINE L1 -145 7328 7285 3 901 292 300 55 41 chr15 41519406 41519552 -61975422 - MLT1A1 LTR MaLR -4 545 398 3 901 757 337 147 11 chr15 41519601 41520057 -61974917 - MLT-int LTR MaLR -1170 565 48 3 901 359 289 168 8 chr15 41520097 41520248 -61974726 - MLT1A1 LTR MaLR -5 403 231 3 901 1174 271 46 92 chr15 41520371 41520895 -61974079 + RLTR12B LTR ERVK 1 500 -28 3 901 723 223 130 37 chr15 41521373 41521643 -61973331 - RMER20B LTR ERVK -208 419 125 4 901 673 310 14 0 chr15 41522357 41522570 -61972404 + B3 SINE B2 1 216 0 4 901 246 333 67 50 chr15 41523024 41523144 -61971830 + MIR3 SINE MIR 81 202 -6 4 901 258 105 0 0 chr15 41524410 41524448 -61970526 + (CTTA)n Simple_repeat Simple_repeat 1 38 0 4 901 447 327 74 12 chr15 41524567 41524904 -61970070 - Lx9 LINE L1 -137 7507 7150 4 901 1238 314 52 69 chr15 41524964 41525678 -61969296 - Lx9 LINE L1 -610 7034 6305 4 901 1637 31 11 0 chr15 41525887 41526078 -61968896 - B2_Mm1t SINE B2 0 193 1 4 901 893 116 7 0 chr15 41526774 41526920 -61968054 + (TC)n Simple_repeat Simple_repeat 2 148 0 4 901 225 196 0 0 chr15 41528420 41528466 -61966508 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 4 901 5249 213 59 4 chr15 41528467 41529601 -61965373 - Lx5 LINE L1 0 7050 5855 4 901 4692 161 19 11 chr15 41529578 41530469 -61964505 + Lx5 LINE L1 4980 5877 0 4 901 241 316 87 61 chr15 41531052 41531281 -61963693 - MLT1A LTR MaLR -10 600 366 4 901 885 19 0 0 chr15 41531577 41531680 -61963294 + (TC)n Simple_repeat Simple_repeat 2 104 0 5 901 402 254 62 48 chr15 41531710 41531855 -61963119 - Lx5 LINE L1 -3 7047 6901 5 901 395 277 43 136 chr15 41532058 41532158 -61962816 - MLT1A LTR MaLR -120 254 174 4 901 303 28 0 0 chr15 41532158 41532194 -61962780 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 901 395 277 43 136 chr15 41532194 41532277 -61962697 - MLT1A LTR MaLR -201 173 88 4 901 317 277 87 56 chr15 41532338 41532464 -61962510 - MLT1A-int LTR MaLR -22 1349 1220 4 901 582 227 42 104 chr15 41532484 41532676 -61962298 + B3A SINE B2 3 182 -16 5 901 28 0 0 0 chr15 41532718 41532746 -61962228 + AT_rich Low_complexity Low_complexity 1 28 0 5 901 308 280 38 46 chr15 41532836 41532967 -61962007 - MLT-int LTR MaLR -177 1558 1429 5 901 1095 329 37 9 chr15 41533348 41533777 -61961197 - MLT1A-int LTR MaLR -644 727 287 4 901 251 276 176 28 chr15 41533753 41533861 -61961113 - MLT-int LTR MaLR -1560 175 52 5 901 423 0 0 0 chr15 41534113 41534160 -61960814 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 901 203 79 26 0 chr15 41534203 41534241 -61960733 + (CAAAAA)n Simple_repeat Simple_repeat 6 44 0 5 901 549 311 99 46 chr15 41535008 41535271 -61959703 - MLT2B4 LTR ERVL -180 376 100 5 901 432 0 0 0 chr15 41535275 41535323 -61959651 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 901 628 248 0 52 chr15 41535619 41535755 -61959219 - RSINE1 SINE B4 -33 132 4 6 901 468 0 0 0 chr15 41535772 41535824 -61959150 + (GA)n Simple_repeat Simple_repeat 1 52 0 6 901 274 358 18 9 chr15 41535887 41535997 -61958977 + Tigger15a DNA TcMar 164 274 -441 6 901 22 0 0 0 chr15 41536528 41536550 -61958424 + AT_rich Low_complexity Low_complexity 1 22 0 6 901 5154 25 12 3 chr15 41537081 41537687 -61957287 - L1Md_F2 LINE L1 -2 6580 5970 6 901 226 340 135 19 chr15 41539658 41539865 -61955109 + MIR SINE MIR 32 262 0 6 901 212 333 82 73 chr15 41540615 41540848 -61954126 - MIR SINE MIR -21 241 7 6 901 26 50 0 0 chr15 41541151 41541191 -61953783 + AT_rich Low_complexity Low_complexity 1 40 0 6 901 753 300 41 104 chr15 41541234 41541821 -61953153 - L1MB2 LINE L1 -43 6128 5579 6 901 22 0 0 0 chr15 41542801 41542823 -61952151 + AT_rich Low_complexity Low_complexity 1 22 0 7 901 806 244 24 0 chr15 41542981 41543149 -61951825 + ID_B1 SINE B4 2 173 -51 7 901 388 284 39 0 chr15 41543063 41543165 -61951809 + PB1D10 SINE Alu 5 110 -7 7 901 536 0 16 0 chr15 41543543 41543607 -61951367 + (TC)n Simple_repeat Simple_repeat 1 65 0 7 901 370 288 81 48 chr15 41543635 41543759 -61951215 - RSINE1 SINE B4 -10 155 28 7 901 23 54 0 0 chr15 41544629 41544666 -61950308 + AT_rich Low_complexity Low_complexity 1 37 0 7 901 3349 28 8 0 chr15 41545182 41545575 -61949399 - MTA_Mm LTR MaLR 0 396 1 7 901 361 313 83 46 chr15 41546019 41546538 -61948436 + HAL1 LINE L1 903 1440 -1067 7 901 23 54 0 0 chr15 41547532 41547569 -61947405 + AT_rich Low_complexity Low_complexity 1 37 0 7 901 343 346 129 68 chr15 41548209 41548901 -61946073 - L2 LINE L2 -421 2998 2265 7 901 3655 202 69 72 chr15 41548904 41549235 -61945739 - L1_Mur3 LINE L1 -2174 3706 3323 8 901 183 42 0 0 chr15 41549235 41549259 -61945715 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 901 3655 202 69 72 chr15 41549259 41549714 -61945260 - L1_Mur3 LINE L1 -2558 3322 2925 8 112 2112 175 49 15 chr15 41549714 41550121 -61944853 - MTC LTR MaLR 0 421 1 8 902 3655 202 69 72 chr15 41550121 41550526 -61944448 - L1_Mur3 LINE L1 -2956 2924 2521 8 902 393 281 65 29 chr15 41551795 41551934 -61943040 + ID_B1 SINE B4 70 213 -11 8 902 202 274 56 67 chr15 41551990 41552080 -61942894 - L2 LINE L2 -528 2891 2803 8 902 3599 47 2 11 chr15 41552083 41552538 -61942436 + L1Md_F2 LINE L1 6120 6570 -12 8 902 1043 217 10 0 chr15 41553085 41553288 -61941686 + B3 SINE B2 1 205 -11 8 902 198 0 0 0 chr15 41553593 41553615 -61941359 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 8 902 182 310 105 9 chr15 41554313 41554427 -61940547 + MIRb SINE MIR 34 158 -110 8 902 239 450 34 0 chr15 41554873 41555022 -61939952 + MER91A DNA Tip100 35 188 -8 8 902 253 259 10 35 chr15 41555559 41555656 -61939318 - RSINE1 SINE B4 -22 143 3 9 902 294 403 63 9 chr15 41556266 41556489 -61938485 - MER102b DNA MER1_type -106 235 1 9 902 493 322 35 77 chr15 41556488 41556677 -61938297 + B3A SINE B2 4 182 -34 9 902 229 304 18 0 chr15 41557236 41557292 -61937682 - tRNA-Pro-CCY tRNA tRNA -5 70 14 9 902 293 258 16 0 chr15 41557249 41557311 -61937663 - ID4_ SINE ID -20 63 1 9 902 194 327 52 43 chr15 41557395 41557510 -61937464 - L2a LINE L2 0 3426 3311 9 902 530 262 0 20 chr15 41557823 41557971 -61937003 - B1F SINE Alu -4 145 1 9 902 453 341 79 79 chr15 41558004 41558315 -61936659 + MLT1A LTR MaLR 2 317 -57 9 902 504 0 0 0 chr15 41558315 41558371 -61936603 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 9 902 453 341 79 79 chr15 41558371 41558425 -61936549 + MLT1A LTR MaLR 318 367 -7 9 902 354 61 0 0 chr15 41559155 41559204 -61935770 + (TC)n Simple_repeat Simple_repeat 1 49 0 9 902 2815 85 8 3 chr15 41559634 41560025 -61934949 + L1_Mus3 LINE L1 6244 6636 -2 1 902 22 35 0 0 chr15 41560206 41560235 -61934739 + AT_rich Low_complexity Low_complexity 1 29 0 1 902 250 346 0 0 chr15 41560238 41560319 -61934655 - ID4 SINE ID -1 82 2 1 902 813 107 0 22 chr15 41560976 41561110 -61933864 + Lx2 LINE L1 6867 6997 0 1 902 232 160 180 60 chr15 41561240 41561340 -61933634 + LTR82B Low_complexity ERVL 80 191 -639 1 902 1118 188 54 106 chr15 41561504 41561638 -61933336 - Lx7 LINE L1 -70 7626 7560 1 902 3205 57 0 7 chr15 41561638 41562042 -61932932 + L1Md_F2 LINE L1 6170 6570 -12 1 902 1118 142 3 107 chr15 41562042 41562272 -61932702 - Lx7 LINE L1 -137 7559 7358 1 902 387 0 0 0 chr15 41562276 41562319 -61932655 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 902 192 152 0 0 chr15 41562319 41562352 -61932622 + GA-rich Low_complexity Low_complexity 4 36 0 1 902 1033 208 47 27 chr15 41562457 41562714 -61932260 - Lx7 LINE L1 -375 7321 7060 1 902 443 202 37 46 chr15 41563053 41563162 -61931812 + PB1D10 SINE Alu 1 108 -9 1 902 21 0 0 0 chr15 41563285 41563306 -61931668 + AT_rich Low_complexity Low_complexity 1 21 0 1 902 273 307 12 62 chr15 41564301 41564353 -61930621 - L3 LINE CR1 -87 4402 4352 1 902 2001 120 11 105 chr15 41564353 41564674 -61930300 - ORR1A1 LTR MaLR 0 346 59 1 902 1114 75 0 7 chr15 41564674 41564821 -61930153 - B1_Mm SINE Alu 0 147 2 1 902 2001 120 11 105 chr15 41564821 41564881 -61930093 - ORR1A1 LTR MaLR -288 58 1 1 902 273 307 12 62 chr15 41564881 41564908 -61930066 - L3 LINE CR1 -138 4351 4327 1 902 21 0 0 0 chr15 41565349 41565370 -61929604 + AT_rich Low_complexity Low_complexity 1 21 0 1 902 477 50 0 0 chr15 41565614 41565674 -61929300 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 902 22 35 0 0 chr15 41566084 41566113 -61928861 + AT_rich Low_complexity Low_complexity 1 29 0 1 902 217 89 22 22 chr15 41566297 41566343 -61928631 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 1 902 303 291 40 57 chr15 41566426 41566550 -61928424 - B1F SINE Alu -5 144 23 1 902 809 348 73 11 chr15 41567093 41567625 -61927349 - Lx8 LINE L1 -85 7388 6824 1 902 283 358 78 75 chr15 41567691 41567999 -61926975 - LTR85c LTR Gypsy? -250 573 265 1 902 256 132 36 54 chr15 41568219 41568275 -61926699 - MLT2C2 LTR ERVL -11 556 502 1 902 450 0 0 0 chr15 41568290 41568340 -61926634 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 902 851 283 40 58 chr15 41568366 41568771 -61926203 - MLT2C2 LTR ERVL -17 397 7 1 902 515 261 124 22 chr15 41569148 41569285 -61925689 + RSINE1 SINE B4 1 151 -14 1 902 503 281 29 0 chr15 41569359 41569498 -61925476 + ID_B1 SINE B4 81 223 -1 1 902 600 73 0 0 chr15 41570429 41570511 -61924463 + (CTTA)n Simple_repeat Simple_repeat 1 82 0 1 902 487 282 47 0 chr15 41570511 41570660 -61924314 - RSINE1 SINE B4 -8 157 2 1 902 201 304 0 42 chr15 41571072 41571144 -61923830 + G-rich Low_complexity Low_complexity 5 73 0 1 902 240 208 0 20 chr15 41571093 41571142 -61923832 + GA-rich Low_complexity Low_complexity 5 52 0 1 902 554 326 58 56 chr15 41571291 41571749 -61923225 - MLT1D LTR MaLR -9 496 1 1 902 209 91 0 43 chr15 41572412 41572458 -61922516 + (TTTTTG)n Simple_repeat Simple_repeat 3 46 0 1 902 1077 75 0 64 chr15 41572459 41572616 -61922358 - B1_Mus2 SINE Alu 0 147 1 1 902 426 311 63 63 chr15 41572893 41573130 -61921844 - MIRb SINE MIR -7 261 25 1 902 256 176 14 14 chr15 41573842 41573911 -61921063 + GA-rich Low_complexity Low_complexity 5 73 0 1 902 717 144 8 0 chr15 41573919 41574037 -61920937 + B1_Mur3 SINE Alu 22 140 -9 1 902 266 271 7 139 chr15 41574037 41574051 -61920923 + MT2B LTR ERVL 186 299 -302 1 902 237 83 0 0 chr15 41574128 41574164 -61920810 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 902 264 59 0 0 chr15 41574307 41574341 -61920633 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 902 207 0 0 0 chr15 41574341 41574364 -61920610 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 902 888 37 0 0 chr15 41574441 41574549 -61920425 + (TA)n Simple_repeat Simple_repeat 2 109 0 1 902 366 156 0 0 chr15 41574829 41574893 -61920081 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 902 207 349 23 31 chr15 41575072 41575202 -61919772 + L2 LINE L2 2374 2502 -917 1 902 28 29 0 0 chr15 41575265 41575300 -61919674 + AT_rich Low_complexity Low_complexity 1 35 0 1 902 193 369 100 46 chr15 41575304 41575693 -61919281 + L2 LINE L2 2627 3036 -383 1 902 201 282 68 34 chr15 41576177 41576265 -61918709 - L2a LINE L2 -348 3078 2988 1 902 410 282 18 0 chr15 41577331 41577441 -61917533 + PB1D7 SINE Alu 9 120 0 1 902 693 221 31 6 chr15 41577994 41578159 -61916815 + B3 SINE B2 1 177 -18 1 902 22 35 0 0 chr15 41578161 41578190 -61916784 + AT_rich Low_complexity Low_complexity 1 29 0 1 902 338 332 39 17 chr15 41579150 41579383 -61915591 - L1MA4 LINE L1 -382 5918 5681 1 902 207 358 98 13 chr15 41579465 41579618 -61915356 - MIR SINE MIR -10 252 87 1 902 297 359 19 0 chr15 41580681 41580787 -61914187 + PB1D10 SINE Alu 1 108 -9 1 902 335 225 12 59 chr15 41580787 41580872 -61914102 + ID4 SINE ID 3 83 0 1 902 302 199 148 0 chr15 41585794 41585872 -61909102 + ID4 SINE ID 9 99 -53 1 902 24 53 0 0 chr15 41586204 41586242 -61908732 + AT_rich Low_complexity Low_complexity 1 38 0 1 902 7089 91 7 6 chr15 41586978 41588146 -61906828 - L1_Mus3 LINE L1 -5 6633 5465 1 902 380 309 42 35 chr15 41588509 41588653 -61906321 - Lx5 LINE L1 -53 6997 6853 1 902 2832 177 34 84 chr15 41588654 41589277 -61905697 - RMER13B LTR ERVK -323 585 1 1 902 2064 160 25 27 chr15 41590707 41591073 -61903901 - ORR1B2 LTR MaLR -2 365 1 1 902 2443 111 40 25 chr15 41591293 41591691 -61903283 - Lx4A LINE L1 -140 6918 6515 1 902 2222 132 0 0 chr15 41591717 41592057 -61902917 + Lx4A LINE L1 6145 6484 -574 1 902 864 216 23 6 chr15 41592531 41592708 -61902266 - ORR1D1 LTR MaLR 0 374 195 1 902 885 195 63 14 chr15 41592719 41592942 -61902032 - Lx5 LINE L1 -2 7048 6815 1 902 1009 171 51 42 chr15 41592942 41592969 -61902005 - ORR1D1 LTR MaLR -156 218 194 1 902 1874 83 38 8 chr15 41592969 41593235 -61901739 - L1Md_F2 LINE L1 -12 6570 6297 1 902 1009 171 51 42 chr15 41593235 41593421 -61901553 - ORR1D1 LTR MaLR -181 193 3 1 902 237 320 46 109 chr15 41593873 41594096 -61900878 - MIR SINE MIR -28 240 26 1 902 3302 41 8 0 chr15 41595348 41595741 -61899233 + MTA_Mm LTR MaLR 1 396 0 1 902 847 276 56 52 chr15 41597191 41597605 -61897369 - L1MA4 LINE L1 -376 5936 5511 1 902 387 0 0 0 chr15 41597605 41597648 -61897326 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 902 5157 127 36 4 chr15 41597649 41598471 -61896503 - Lx LINE L1 -6 6648 5800 1 902 847 272 55 55 chr15 41598471 41598498 -61896476 - L1MA4 LINE L1 -790 5510 5491 1 902 21 0 0 0 chr15 41599443 41599464 -61895510 + AT_rich Low_complexity Low_complexity 1 21 0 1 902 2410 88 62 42 chr15 41600183 41600471 -61894503 + Lx LINE L1 6244 6518 -136 1 902 189 0 0 0 chr15 41600471 41600492 -61894482 + (TGGG)n Simple_repeat Simple_repeat 1 21 0 1 902 2410 88 62 42 chr15 41600492 41600606 -61894368 + Lx LINE L1 6519 6653 -1 1 902 28 48 0 0 chr15 41601113 41601155 -61893819 + AT_rich Low_complexity Low_complexity 1 42 0 1 902 1936 162 47 8 chr15 41603076 41603436 -61891538 + Lx5 LINE L1 6629 7002 -48 1 902 335 56 55 27 chr15 41604244 41604293 -61890681 + (TCTCC)n Simple_repeat Simple_repeat 4 56 0 1 902 1102 52 29 17 chr15 41604293 41604468 -61890506 + (TCTCCC)n Simple_repeat Simple_repeat 1 177 0 1 902 335 56 55 27 chr15 41604468 41604491 -61890483 + (TCTCC)n Simple_repeat Simple_repeat 3 23 0 1 902 235 281 169 0 chr15 41604589 41604678 -61890296 + ORR1E LTR MaLR 256 359 0 1 902 227 215 0 30 chr15 41604984 41605051 -61889923 + (CTA)n Simple_repeat Simple_repeat 1 65 0 1 902 387 0 0 0 chr15 41605103 41605146 -61889828 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 902 266 240 82 10 chr15 41606103 41606200 -61888774 + L3 LINE CR1 2011 2114 -2375 1 902 430 248 0 29 chr15 41606353 41606457 -61888517 + MER53 DNA hAT 1 101 -92 1 902 2039 278 66 41 chr15 41606773 41606872 -61888102 - RLTR20B2 LTR ERVK -5 546 459 1 902 333 0 0 0 chr15 41606872 41606909 -61888065 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 902 252 0 0 0 chr15 41606909 41606936 -61888038 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 902 2039 204 65 11 chr15 41606936 41607373 -61887601 - RLTR20B2 LTR ERVK -96 464 2 1 902 237 333 73 46 chr15 41607463 41607614 -61887360 - MER5B DNA MER1_type -15 163 9 1 902 276 287 20 60 chr15 41608686 41608701 -61886273 - MT2B2 LTR ERVL -322 262 167 1 902 353 235 59 0 chr15 41608701 41608786 -61886188 - PB1D7 SINE Alu -28 92 3 1 902 362 355 78 19 chr15 41608811 41609067 -61885907 - MLT1J1 LTR MaLR -166 278 8 1 902 1084 246 119 72 chr15 41609136 41609456 -61885518 - ORR1E LTR MaLR -10 349 15 1 902 328 356 68 11 chr15 41609835 41610025 -61884949 - MER58A DNA MER1_type -4 220 20 1 902 192 302 49 48 chr15 41610797 41610934 -61884040 - MER5B DNA MER1_type -15 174 26 1 902 21 0 0 0 chr15 41612203 41612224 -61882750 + AT_rich Low_complexity Low_complexity 1 21 0 1 902 1629 47 0 0 chr15 41613558 41613751 -61881223 + B2_Mm1t SINE B2 1 193 0 1 902 630 240 109 23 chr15 41615052 41615227 -61879747 - B3A SINE B2 -7 191 2 1 902 234 0 0 0 chr15 41615349 41615375 -61879599 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 902 855 274 50 12 chr15 41615396 41615636 -61879338 - B4 SINE B4 -42 250 2 1 902 369 0 0 0 chr15 41616216 41616257 -61878717 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 902 296 352 31 15 chr15 41616259 41616389 -61878585 - B1F SINE Alu -13 136 5 1 902 450 0 0 0 chr15 41616475 41616525 -61878449 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 902 343 215 114 0 chr15 41616569 41616648 -61878326 - PB1D10 SINE Alu -9 108 21 1 902 515 286 112 39 chr15 41617071 41617402 -61877572 - L1M4 LINE L1 -1087 5059 4705 1 902 376 281 165 29 chr15 41617403 41617645 -61877329 + L1MB8 LINE L1 5642 5916 -262 2 902 213 211 0 0 chr15 41618579 41618631 -61876343 + CT-rich Low_complexity Low_complexity 2 53 0 2 902 218 308 74 37 chr15 41618636 41618744 -61876230 - PB1D10 SINE Alu -5 112 1 2 902 313 258 168 34 chr15 41618900 41619140 -61875834 - MLT1A0 LTR MaLR -93 272 1 2 902 223 336 15 83 chr15 41619222 41619355 -61875619 + MER5A DNA MER1_type 55 178 -11 2 902 336 111 0 0 chr15 41619967 41620030 -61874944 + (CA)n Simple_repeat Simple_repeat 2 64 0 2 902 220 315 0 11 chr15 41620192 41620282 -61874692 + (CGGGG)n Simple_repeat Simple_repeat 2 90 0 2 902 23 92 0 0 chr15 41620488 41620553 -61874421 + GC_rich Low_complexity Low_complexity 1 65 0 2 902 1178 21 21 0 chr15 41621288 41621433 -61873541 + B1_Mus1 SINE Alu 1 148 0 2 902 368 272 123 0 chr15 41622368 41622482 -61872492 + MIR3 SINE MIR 59 186 -22 2 902 263 49 24 0 chr15 41622856 41622897 -61872077 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 2 902 257 326 43 21 chr15 41624400 41624494 -61870480 - Tigger7 DNA MER2_type -2388 103 8 2 902 30 77 0 0 chr15 41624674 41624739 -61870235 + AT_rich Low_complexity Low_complexity 1 65 0 2 902 432 257 133 38 chr15 41624978 41625241 -61869733 - B4A SINE B4 -3 289 2 2 902 279 299 30 30 chr15 41625395 41625495 -61869479 + MER3 DNA MER1_type 10 109 -100 2 902 22 0 0 0 chr15 41625495 41625517 -61869457 + AT_rich Low_complexity Low_complexity 1 22 0 2 902 302 266 49 158 chr15 41625832 41626015 -61868959 - MER31A LTR ERV1 -268 217 55 2 902 29 60 0 0 chr15 41627061 41627111 -61867863 + AT_rich Low_complexity Low_complexity 1 50 0 2 902 281 301 80 7 chr15 41627193 41627330 -61867644 - L1MC LINE L1 -2326 5556 5410 2 902 192 77 0 0 chr15 41627499 41627525 -61867449 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 902 1539 67 0 0 chr15 41627649 41627842 -61867132 + B2_Mm1t SINE B2 1 193 0 2 902 698 183 10 77 chr15 41628526 41628721 -61866253 - B2_Mm2 SINE B2 -13 182 1 2 902 807 326 63 7 chr15 41630728 41630815 -61864159 + B4A SINE B4 9 110 -182 2 902 405 0 0 0 chr15 41630815 41630860 -61864114 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 902 807 326 63 7 chr15 41630860 41631041 -61863933 + B4A SINE B4 111 291 -1 2 902 435 113 0 0 chr15 41632684 41632755 -61862219 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 902 339 25 0 0 chr15 41633353 41633393 -61861581 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 902 315 171 0 0 chr15 41634005 41634081 -61860893 + GA-rich Low_complexity Low_complexity 2 77 0 2 902 186 118 0 0 chr15 41634309 41634343 -61860631 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 902 25 0 0 0 chr15 41634681 41634706 -61860268 + AT_rich Low_complexity Low_complexity 1 25 0 2 902 717 325 101 17 chr15 41635085 41635382 -61859592 - MTD LTR MaLR -78 341 20 2 902 1966 168 34 17 chr15 41636051 41636402 -61858572 - ORR1C1 LTR MaLR -19 359 3 2 902 364 291 106 7 chr15 41636706 41636848 -61858126 - B3A SINE B2 -7 191 36 2 902 575 331 37 52 chr15 41636906 41637174 -61857800 - MLT1C LTR MaLR -2 465 202 2 902 1591 86 0 0 chr15 41637220 41637440 -61857534 + L1_Mus2 LINE L1 6346 6565 -1 2 902 348 127 0 0 chr15 41637473 41637528 -61857446 + (GAAAA)n Simple_repeat Simple_repeat 2 56 0 2 902 189 0 0 0 chr15 41637836 41637857 -61857117 + (ATG)n Simple_repeat Simple_repeat 1 21 0 2 902 30217 99 9 10 chr15 41637857 41643426 -61851548 + L1_Mus3 LINE L1 1076 6638 0 2 902 22 0 0 0 chr15 41643469 41643491 -61851483 + AT_rich Low_complexity Low_complexity 1 22 0 2 902 249 258 74 168 chr15 41644376 41644525 -61850449 + B4A SINE B4 158 292 0 2 902 183 129 0 0 chr15 41644559 41644590 -61850384 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 902 229 295 60 55 chr15 41645777 41645803 -61849171 - L1M4 LINE L1 -3283 2863 2840 2 902 315 0 0 0 chr15 41645803 41645838 -61849136 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 2 902 625 163 113 8 chr15 41645838 41645962 -61849012 - B1_Mur3 SINE Alu -12 137 1 2 902 245 295 60 54 chr15 41645962 41646137 -61848837 - L1M4 LINE L1 -3307 2839 2660 2 902 324 288 0 0 chr15 41646702 41646782 -61848192 + ID4_ SINE ID 3 82 -1 2 902 203 245 88 152 chr15 41647834 41647959 -61847015 + MIR SINE MIR 91 207 -55 2 902 24 0 0 0 chr15 41648885 41648909 -61846065 + AT_rich Low_complexity Low_complexity 1 24 0 2 902 461 207 35 7 chr15 41653760 41653901 -61841073 + Lx9 LINE L1 7497 7641 -3 2 902 406 326 23 15 chr15 41655152 41655283 -61839691 + B1F1 SINE Alu 1 132 -17 2 902 227 284 78 0 chr15 41655856 41655958 -61839016 - Charlie2b DNA MER1_type -791 1991 1882 2 902 1460 59 16 0 chr15 41656375 41656562 -61838412 - B2_Mm2 SINE B2 -4 191 2 2 902 26 30 0 0 chr15 41658540 41658573 -61836401 + AT_rich Low_complexity Low_complexity 1 33 0 2 902 312 283 45 19 chr15 41658582 41658737 -61836237 + L1ME2 LINE L1 5706 5864 -300 2 902 285 354 78 23 chr15 41659320 41659537 -61835437 - B4A SINE B4 -2 290 62 2 902 297 0 0 0 chr15 41661788 41661821 -61833153 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 902 21 0 0 0 chr15 41663476 41663497 -61831477 + AT_rich Low_complexity Low_complexity 1 21 0 2 902 22 0 0 0 chr15 41663576 41663598 -61831376 + AT_rich Low_complexity Low_complexity 1 22 0 2 902 183 330 51 10 chr15 41664289 41664387 -61830587 - MIR SINE MIR -33 229 128 2 902 549 291 78 0 chr15 41664413 41664554 -61830420 + RSINE1 SINE B4 4 155 -10 2 902 420 20 0 0 chr15 41665186 41665235 -61829739 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 902 378 107 0 0 chr15 41665425 41665481 -61829493 + (TGG)n Simple_repeat Simple_repeat 3 58 0 2 902 215 330 105 11 chr15 41665528 41665623 -61829351 - MIRb SINE MIR -164 104 1 2 902 343 237 153 0 chr15 41665887 41666018 -61828956 - L1MEe LINE L1 -651 5682 5532 2 902 268 299 59 11 chr15 41666171 41666357 -61828617 - L1MEe LINE L1 -979 5167 4973 2 902 267 281 9 37 chr15 41666645 41666752 -61828222 - L1MEe LINE L1 -1525 4621 4518 2 902 2561 78 0 22 chr15 41666823 41666843 -61828131 - L1_Mus1 LINE L1 0 6567 6555 2 902 6719 40 6 0 chr15 41666843 41667654 -61827320 - L1Md_F2 LINE L1 0 6582 5767 2 902 7518 64 0 7 chr15 41667654 41668712 -61826262 - L1_Mus1 LINE L1 -13 6554 5497 2 902 2512 75 3 0 chr15 41668710 41669069 -61825905 + L1_Mus1 LINE L1 5139 5498 -385 2 902 1808 264 86 19 chr15 41669147 41669701 -61825273 - L1MEe LINE L1 -1822 4324 3736 2 902 261 0 0 0 chr15 41669701 41669730 -61825244 + (TATG)n Simple_repeat Simple_repeat 4 32 0 2 902 1808 264 86 19 chr15 41669730 41670045 -61824929 - L1MEe LINE L1 -2411 3735 3398 2 902 337 307 123 31 chr15 41670571 41670766 -61824208 - L1MEe LINE L1 -4366 1800 1588 2 902 368 214 59 30 chr15 41670789 41670890 -61824084 + MER2 DNA MER2_type 92 195 -150 2 902 244 239 80 0 chr15 41671338 41671426 -61823548 - L1MEe LINE L1 -4927 1315 1221 2 902 3204 118 95 6 chr15 41672278 41672352 -61822622 - RLTR20A2 LTR ERVK -3 575 481 2 902 357 109 0 0 chr15 41672352 41672416 -61822558 + (CA)n Simple_repeat Simple_repeat 2 65 0 2 902 3204 118 95 6 chr15 41672416 41672869 -61822105 - RLTR20A2 LTR ERVK -98 480 2 2 902 464 173 0 36 chr15 41673414 41673498 -61821476 - B1_Mus2 SINE Alu -7 140 60 2 902 22 0 0 0 chr15 41674788 41674810 -61820164 + AT_rich Low_complexity Low_complexity 1 22 0 2 902 505 315 118 13 chr15 41675118 41675433 -61819541 - Lx7 LINE L1 -584 7112 6765 2 902 382 318 37 29 chr15 41676121 41676257 -61818717 + ID_B1 SINE B4 88 224 0 2 902 189 0 0 0 chr15 41676333 41676354 -61818620 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 902 1739 163 113 19 chr15 41676355 41676717 -61818257 - RMER10B LTR ERVL -2 396 1 2 902 203 105 53 0 chr15 41676717 41676755 -61818219 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 2 902 641 241 6 100 chr15 41676762 41676942 -61818032 + RSINE1 SINE B4 3 165 0 2 902 432 264 0 21 chr15 41677421 41677514 -61817460 + B1_Mur1 SINE Alu 24 114 -35 2 902 293 310 134 27 chr15 41678561 41678710 -61816264 + B4A SINE B4 127 291 -1 2 902 1563 239 187 46 chr15 41678766 41679467 -61815507 - RCHARR1 DNA MER1_type -30 944 145 2 902 429 135 34 0 chr15 41679626 41679715 -61815259 + CT-rich Low_complexity Low_complexity 2 93 0 2 902 180 158 0 0 chr15 41680472 41680510 -61814464 + T-rich Low_complexity Low_complexity 1 38 0 2 903 233 269 70 61 chr15 41682319 41682434 -61812540 - PB1D10 SINE Alu 0 117 2 2 903 183 372 98 39 chr15 41682442 41682646 -61812328 - MIR SINE MIR -24 238 23 2 903 243 266 31 0 chr15 41683640 41683704 -61811270 - Lx8 LINE L1 -199 7274 7209 2 903 226 310 41 46 chr15 41683970 41684166 -61810808 + L1ME1 LINE L1 5810 6004 -175 2 903 617 345 44 16 chr15 41685798 41686048 -61808926 + B4A SINE B4 1 257 -35 2 903 363 78 0 0 chr15 41687145 41687196 -61807778 + (T)n Simple_repeat Simple_repeat 1 51 0 2 903 1208 61 0 0 chr15 41687196 41687343 -61807631 - B1_Mus2 SINE Alu 0 147 1 2 903 1226 35 7 0 chr15 41687737 41687882 -61807092 + B1_Mus1 SINE Alu 2 147 -1 2 903 1803 195 106 12 chr15 41689234 41689727 -61805247 - Lx9 LINE L1 -1 7643 7105 2 903 1169 189 8 29 chr15 41689726 41689971 -61805003 + Lx9 LINE L1 6741 6980 -664 2 903 207 0 0 0 chr15 41690162 41690185 -61804789 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 903 207 0 0 0 chr15 41691714 41691737 -61803237 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2 903 449 97 0 14 chr15 41692999 41693072 -61801902 + (TG)n Simple_repeat Simple_repeat 2 73 0 2 903 314 316 191 28 chr15 41693453 41693704 -61801270 + L1M5 LINE L1 3157 3448 -2698 2 903 306 73 0 0 chr15 41693718 41693759 -61801215 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 903 893 45 0 0 chr15 41696119 41696230 -61798744 + B1_Mus1 SINE Alu 38 148 0 2 903 200 34 0 33 chr15 41696230 41696260 -61798714 + (GAAAA)n Simple_repeat Simple_repeat 1 29 0 2 903 299 312 62 31 chr15 41696888 41697017 -61797957 + ID_B1 SINE B4 63 195 -29 2 903 253 292 199 28 chr15 41698336 41698512 -61796462 - MIR SINE MIR -10 252 47 2 903 213 121 0 0 chr15 41699177 41699210 -61795764 + (T)n Simple_repeat Simple_repeat 1 33 0 2 903 315 0 0 0 chr15 41699533 41699568 -61795406 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 903 527 291 131 35 chr15 41699772 41700038 -61794936 + B4A SINE B4 3 292 0 3 903 414 0 0 0 chr15 41702070 41702116 -61792858 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 3 903 650 232 7 7 chr15 41702116 41702250 -61792724 - B1_Mur1 SINE Alu -10 139 5 3 903 354 158 126 0 chr15 41702310 41702405 -61792569 - Lx9 LINE L1 -10 7634 7528 3 903 315 0 0 0 chr15 41702407 41702442 -61792532 + (TTG)n Simple_repeat Simple_repeat 3 37 0 3 903 645 214 0 0 chr15 41702494 41702625 -61792349 + Lx9 LINE L1 7295 7425 -219 3 903 779 244 67 0 chr15 41703857 41704050 -61790924 + B3 SINE B2 11 216 0 3 903 393 162 0 0 chr15 41704680 41704748 -61790226 - L1M3 LINE L1 -447 5742 5675 3 903 739 157 23 8 chr15 41704798 41704926 -61790048 - B3 SINE B2 -86 130 1 3 903 242 51 48 48 chr15 41705038 41705100 -61789874 + (CAAAAA)n Simple_repeat Simple_repeat 3 64 0 3 903 840 323 56 23 chr15 41705112 41705505 -61789469 - Lx7 LINE L1 -396 7300 6895 3 903 292 248 103 22 chr15 41705508 41705644 -61789330 - L1M3 LINE L1 -599 5692 5546 3 903 371 363 161 6 chr15 41705981 41706336 -61788638 + L2 LINE L2 1270 1679 -1740 3 903 354 94 0 0 chr15 41706458 41706511 -61788463 + Lx9 LINE L1 7425 7477 -167 3 903 438 36 0 0 chr15 41706513 41706569 -61788405 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 903 28 29 0 0 chr15 41706621 41706656 -61788318 + AT_rich Low_complexity Low_complexity 1 35 0 3 903 640 279 126 47 chr15 41706832 41707174 -61787800 - Lx9 LINE L1 -453 7191 6823 3 903 264 364 0 0 chr15 41707186 41707315 -61787659 - Lx9 LINE L1 -888 6756 6628 3 903 334 316 81 19 chr15 41707343 41707504 -61787470 + L2 LINE L2 1874 2044 -1375 3 903 296 351 144 84 chr15 41707521 41708423 -61786551 + L2 LINE L2 1960 2915 -504 3 903 1214 124 17 0 chr15 41709111 41709288 -61785686 + B2_Mm2 SINE B2 2 181 -14 3 903 180 297 31 62 chr15 41709322 41709419 -61785555 - L2 LINE L2 -926 2493 2400 3 903 200 191 43 0 chr15 41709928 41709975 -61784999 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 3 903 443 286 163 55 chr15 41710593 41710882 -61784092 - RMER20B LTR ERVK -223 404 85 3 903 3012 59 12 20 chr15 41711453 41711854 -61783120 - MTB LTR MaLR 0 400 3 3 903 338 115 82 0 chr15 41711856 41711917 -61783057 - MTB-int LTR MaLR 0 1098 1033 3 903 207 0 0 0 chr15 41711918 41711941 -61783033 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 903 1663 123 30 19 chr15 41711977 41712276 -61782698 - MTB-int LTR MaLR -255 1003 643 3 903 231 260 0 0 chr15 41712426 41712499 -61782475 + Lx8 LINE L1 7399 7471 -2 3 903 253 293 40 0 chr15 41712516 41712615 -61782359 + L1MA6 LINE L1 6155 6257 -43 3 903 342 316 65 13 chr15 41712743 41712897 -61782077 + L1M5 LINE L1 4988 5149 -997 3 903 359 251 12 31 chr15 41713007 41713181 -61781793 + L1M5 LINE L1 5282 5453 -671 3 903 237 212 138 0 chr15 41713284 41713364 -61781610 + L1M5 LINE L1 5561 5651 -543 3 903 373 316 127 14 chr15 41714431 41714652 -61780322 - MLT1C LTR MaLR 0 467 222 3 903 344 225 38 72 chr15 41715206 41715346 -61779628 + MIR SINE MIR 73 211 -57 3 903 861 226 57 70 chr15 41716904 41717108 -61777866 + RMER17C LTR ERVK 12 210 -200 3 903 1014 146 0 0 chr15 41717108 41717279 -61777695 + (TTC)n Simple_repeat Simple_repeat 3 173 0 3 903 861 226 57 70 chr15 41717279 41717374 -61777600 + RMER17C LTR ERVK 211 306 -104 3 903 1448 256 75 73 chr15 41717407 41718038 -61776936 + RMER17C-int LTR ERVK 1 632 -2606 3 903 675 165 15 23 chr15 41718468 41718598 -61776376 + RMER17C-int LTR ERVK 1100 1228 -2010 3 903 1920 134 38 23 chr15 41718604 41718948 -61776026 + RMER17C-int LTR ERVK 2890 3238 0 3 903 585 244 139 42 chr15 41718948 41719297 -61775677 + RMER17C LTR ERVK 1 410 0 3 903 345 307 70 0 chr15 41719560 41719674 -61775300 + MER5A1 DNA MER1_type 45 166 0 3 903 238 318 15 0 chr15 41719715 41719781 -61775193 + MLT1F1 LTR MaLR 68 134 -435 3 903 576 167 20 0 chr15 41720165 41720267 -61774707 - RMER19B LTR ERVK 0 902 799 3 903 1002 266 53 19 chr15 41720355 41720810 -61774164 + L1VL4 LINE L1 444 899 -5661 3 903 3177 130 39 25 chr15 41720819 41721378 -61773596 - RMER17A2 LTR ERVK -335 571 5 3 903 2791 82 8 5 chr15 41721378 41721768 -61773206 + L1_Mus3 LINE L1 6246 6636 -2 3 903 935 195 0 0 chr15 41721768 41721922 -61773052 - RMER19B LTR ERVK -107 795 642 3 903 4680 10 0 12 chr15 41721922 41722421 -61772553 + MT2_Mm LTR ERVL 1 493 0 3 903 48382 14 6 0 chr15 41722421 41727747 -61767227 + MERVL-int LTR ERVL 1 5360 -125 3 903 355 191 46 35 chr15 41727747 41727834 -61767140 + ORR1A3-int LTR MaLR 553 640 -1323 3 903 322 0 0 0 chr15 41727834 41727872 -61767102 + MERVL-int LTR ERVL 5448 5485 0 3 903 4680 10 0 12 chr15 41727872 41728371 -61766603 + MT2_Mm LTR ERVL 1 493 0 3 903 3216 194 60 40 chr15 41728371 41729004 -61765970 - RMER19B LTR ERVK -256 646 1 3 903 2215 171 59 20 chr15 41729463 41729923 -61765051 + MYSERV16_I-int LTR ERVK 1849 2326 0 3 903 801 261 29 114 chr15 41729929 41730271 -61764703 + RLTR20B3 LTR ERVK 23 335 -242 3 903 1678 209 20 80 chr15 41730414 41730815 -61764159 - RLTR1B LTR ERV1 0 512 136 3 903 905 126 7 40 chr15 41731344 41731493 -61763481 - B2_Mm2 SINE B2 -27 168 25 3 903 794 266 10 50 chr15 41731509 41731711 -61763263 - B3A SINE B2 -4 194 1 3 903 181 262 94 12 chr15 41731940 41732025 -61762949 + L3 LINE CR1 25 116 -4373 3 903 288 0 0 0 chr15 41732160 41732192 -61762782 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 903 341 211 6 90 chr15 41732196 41732352 -61762622 - Lx9 LINE L1 -6 7638 7496 3 903 484 36 35 24 chr15 41732373 41732458 -61762516 + (TA)n Simple_repeat Simple_repeat 2 87 0 3 903 4543 180 120 28 chr15 41732463 41733974 -61761000 - ORR1A4-int LTR MaLR -1 1962 1 3 903 1793 152 38 87 chr15 41733974 41734320 -61760654 - ORR1A4 LTR MaLR 0 329 1 3 903 1596 209 27 12 chr15 41734354 41734684 -61760290 - Lx9 LINE L1 -221 7423 7089 3 903 558 251 26 74 chr15 41734689 41734878 -61760096 + Lx9 LINE L1 6909 7088 -556 3 903 841 174 0 0 chr15 41734975 41735113 -61759861 + MTC LTR MaLR 8 145 -276 3 903 2762 179 94 20 chr15 41735116 41735751 -61759223 - RMER6C LTR ERVK 0 690 9 3 903 1121 77 51 0 chr15 41735794 41735950 -61759024 + B2_Mm2 SINE B2 1 164 -31 3 903 792 186 132 20 chr15 41735954 41736151 -61758823 + MTC LTR MaLR 202 420 -1 3 903 288 0 0 0 chr15 41736965 41736997 -61757977 + (A)n Simple_repeat Simple_repeat 1 32 0 3 903 274 136 0 0 chr15 41737096 41737140 -61757834 - RLTR9E LTR ERVK -2 391 348 3 903 1485 104 0 39 chr15 41737127 41737357 -61757617 - RLTR9E LTR ERVK -188 221 1 3 903 1235 181 203 73 chr15 41737694 41738034 -61756940 - ORR1C2 LTR MaLR 0 384 1 3 903 189 147 88 0 chr15 41739263 41739331 -61755643 + (TATATG)n Simple_repeat Simple_repeat 5 78 0 3 903 282 164 0 0 chr15 41739386 41739441 -61755533 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 903 367 351 5 45 chr15 41739811 41739878 -61755096 + L1MB8 LINE L1 5841 5906 -272 3 903 3462 188 66 30 chr15 41739878 41740573 -61754401 + RMER6D LTR ERVK 1 720 0 3 903 367 351 5 45 chr15 41740573 41740705 -61754269 + L1MB8 LINE L1 5907 6032 -146 3 903 267 241 0 0 chr15 41740701 41740759 -61754215 - Lx7 LINE L1 -872 6824 6767 3 903 313 278 26 53 chr15 41740825 41740939 -61754035 - Lx8 LINE L1 -453 7020 6910 3 903 503 200 19 9 chr15 41741018 41741124 -61753850 - RLTR15 LTR ERVK -247 112 6 3 903 183 128 0 133 chr15 41741547 41741592 -61753382 - L3 LINE CR1 -3384 1105 1067 3 903 1071 252 43 60 chr15 41741612 41741999 -61752975 - RLTR20B2 LTR ERVK -148 412 3 3 903 234 180 20 0 chr15 41743126 41743176 -61751798 + (ACATG)n Simple_repeat Simple_repeat 3 53 0 3 903 180 0 0 0 chr15 41743504 41743524 -61751450 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 3 903 258 281 204 21 chr15 41743555 41743697 -61751277 + MER20 DNA MER1_type 46 213 -6 3 903 268 284 29 81 chr15 41743605 41743877 -61751097 + RMER17A LTR ERVK 160 417 -334 3 903 576 0 0 0 chr15 41743877 41743941 -61751033 + (TTTCC)n Simple_repeat Simple_repeat 1 64 0 3 903 1162 95 6 6 chr15 41743941 41744121 -61750853 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 3 903 306 148 0 0 chr15 41744139 41744193 -61750781 + (TTTC)n Simple_repeat Simple_repeat 1 54 0 3 903 399 184 210 20 chr15 41744193 41744293 -61750681 - PB1D9 SINE Alu -1 119 1 3 903 538 238 90 0 chr15 41744518 41744640 -61750334 + B1_Mur3 SINE Alu 1 133 -16 3 903 708 335 122 26 chr15 41744657 41745083 -61749891 - MLT1D LTR MaLR -36 469 3 3 903 234 245 0 0 chr15 41745572 41745625 -61749349 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 903 742 214 120 33 chr15 41745627 41745777 -61749197 - RSINE1 SINE B4 0 165 3 3 903 2077 211 96 7 chr15 41745901 41746359 -61748615 - RLTR19 LTR ERVK 0 499 1 3 903 372 277 64 0 chr15 41746418 41746559 -61748415 + MLT2B3 LTR ERVL 2 151 -403 3 903 284 234 140 26 chr15 41746609 41746723 -61748251 + MLT2B3 LTR ERVL 426 552 -2 3 903 1523 171 136 38 chr15 41747256 41747545 -61747429 + RMER6C LTR ERVK 1 335 -355 3 903 495 0 0 0 chr15 41747545 41747600 -61747374 + (GA)n Simple_repeat Simple_repeat 1 55 0 3 903 1523 171 136 38 chr15 41747600 41747656 -61747318 + RMER6C LTR ERVK 336 380 -310 3 903 1117 164 11 0 chr15 41747657 41747846 -61747128 + RMER6C LTR ERVK 500 690 0 3 903 289 267 22 22 chr15 41748016 41748108 -61746866 + CT-rich Low_complexity Low_complexity 2 93 0 3 903 267 215 0 0 chr15 41749961 41750026 -61744948 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 903 197 54 81 0 chr15 41750873 41750910 -61744064 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 3 903 222 62 0 0 chr15 41750910 41750942 -61744032 + (TCTA)n Simple_repeat Simple_repeat 4 35 0 3 903 202 222 0 22 chr15 41750953 41750999 -61743975 + CT-rich Low_complexity Low_complexity 1 45 0 3 903 324 0 0 0 chr15 41751068 41751104 -61743870 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 903 24 0 0 0 chr15 41752425 41752449 -61742525 + AT_rich Low_complexity Low_complexity 1 24 0 3 903 1760 121 6 102 chr15 41752449 41752791 -61742183 - ORR1A4 LTR MaLR -20 309 1 3 903 206 86 0 54 chr15 41753431 41753468 -61741506 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 3 903 180 216 0 0 chr15 41754306 41754357 -61740617 + (TGG)n Simple_repeat Simple_repeat 1 51 0 3 903 222 304 0 0 chr15 41754369 41754438 -61740536 + (TGG)n Simple_repeat Simple_repeat 1 69 0 3 903 4134 84 5 23 chr15 41754487 41755085 -61739889 + RLTR19-int LTR ERVK 1430 2016 -4121 3 903 358 239 159 68 chr15 41755683 41755898 -61739076 + L1MA8 LINE L1 6006 6241 -50 3 903 281 100 20 0 chr15 41755898 41755948 -61739026 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 3 903 412 245 0 105 chr15 41756028 41756142 -61738832 - RLTR20C LTR ERVK 0 534 433 3 903 1578 239 79 19 chr15 41756139 41756624 -61738350 - RLTR20B1 LTR ERVK -42 499 3 3 903 376 318 78 19 chr15 41757339 41757493 -61737481 - MER5B DNA MER1_type -14 164 2 3 903 38843 31 1 0 chr15 41758042 41764716 -61730258 - L1Md_T LINE L1 0 6585 1 3 903 336 303 109 55 chr15 41765063 41765485 -61729489 + L1VL2 LINE L1 40 484 -5851 3 903 4861 127 48 57 chr15 41765499 41766400 -61728574 - RMER17A2 LTR ERVK -11 895 3 3 903 5738 122 41 46 chr15 41766402 41766822 -61728152 - RMER17A-int LTR ERVK -1 1727 1284 3 903 5354 116 18 33 chr15 41766822 41767643 -61727331 - RMER17D2 LTR ERVK 0 809 1 3 903 5738 122 41 46 chr15 41767643 41768246 -61726728 - RMER17A-int LTR ERVK -445 1283 709 3 903 781 209 60 16 chr15 41768618 41768803 -61726171 - RMER17A-int LTR ERVK -1533 195 3 3 903 1696 163 33 16 chr15 41768818 41769123 -61725851 - RMER17A2 LTR ERVK -9 897 588 3 903 652 170 0 0 chr15 41769123 41769235 -61725739 + L1VL4 LINE L1 497 608 -5694 3 903 21561 161 52 32 chr15 41769232 41770124 -61724850 + Lx2B LINE L1 1548 2469 -3417 3 903 4375 68 0 9 chr15 41770124 41770660 -61724314 - L1_Mus1 LINE L1 -1 6566 6036 4 903 21561 161 52 32 chr15 41770660 41770826 -61724148 + Lx2B LINE L1 2470 2623 -3263 3 903 351 0 0 0 chr15 41770826 41770865 -61724109 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 903 21561 152 44 23 chr15 41770865 41775142 -61719832 + Lx2B LINE L1 2624 6998 -2 3 903 27 0 0 0 chr15 41776669 41776696 -61718278 + AT_rich Low_complexity Low_complexity 1 27 0 4 903 258 353 212 0 chr15 41776928 41777098 -61717876 + MLT1F1 LTR MaLR 325 530 -39 4 903 1555 136 188 3 chr15 41777163 41777466 -61717508 - ORR1B2 LTR MaLR -8 359 1 4 903 3515 69 0 0 chr15 41777490 41777910 -61717064 + BGLII LTR ERVK 2 421 0 4 903 242 56 28 0 chr15 41778096 41778132 -61716842 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 903 1571 42 0 10 chr15 41778627 41778821 -61716153 + B2_Mm1a SINE B2 1 192 -1 4 903 21 0 0 0 chr15 41778831 41778852 -61716122 + AT_rich Low_complexity Low_complexity 1 21 0 4 903 25 31 0 0 chr15 41779745 41779777 -61715197 + AT_rich Low_complexity Low_complexity 1 32 0 4 903 3297 203 54 121 chr15 41781004 41782092 -61712882 + RMER1B Other Other 52 1066 0 4 903 359 171 68 7 chr15 41782117 41782202 -61712772 + B1F1 SINE Alu 64 149 0 4 903 280 209 0 0 chr15 41782401 41782468 -61712506 + T-rich Low_complexity Low_complexity 1 67 0 4 903 328 179 0 0 chr15 41782468 41782546 -61712428 - Lx3A LINE L1 0 6981 6904 4 903 350 131 0 62 chr15 41783405 41783470 -61711504 + B3 SINE B2 1 61 -155 4 903 246 179 29 176 chr15 41783600 41783702 -61711272 + Charlie22a DNA MER1_type 144 230 -261 4 903 180 225 132 66 chr15 41783729 41783805 -61711169 - L3 LINE CR1 -3377 1112 1032 4 903 360 0 0 0 chr15 41783846 41783886 -61711088 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 903 219 103 0 0 chr15 41783913 41783952 -61711022 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 903 1115 95 0 13 chr15 41785069 41785219 -61709755 - B1_Mus1 SINE Alu 0 148 1 4 903 180 306 123 14 chr15 41785613 41785686 -61709288 + L2c LINE L2 3286 3366 -21 4 903 743 295 40 18 chr15 41786787 41787260 -61707714 - L1MB7 LINE L1 -6 6174 5685 4 903 187 116 80 32 chr15 41787284 41787409 -61707565 + (TA)n Simple_repeat Simple_repeat 1 131 0 4 903 224 89 18 114 chr15 41788339 41788453 -61706521 + A-rich Low_complexity Low_complexity 6 108 0 4 903 5414 55 1 0 chr15 41788524 41789227 -61705747 + L1Md_F2 LINE L1 4883 5586 -297 4 903 7853 60 1 6 chr15 41789227 41790228 -61704746 + L1Md_F2 LINE L1 5587 6582 0 4 903 6022 229 122 24 chr15 41790229 41791879 -61703095 - Lx6 LINE L1 -187 7273 5544 4 903 3044 149 17 10 chr15 41791879 41792402 -61702572 - RLTR11A2 LTR ERVK 0 527 1 4 903 6022 164 316 22 chr15 41792402 41793303 -61701671 - Lx6 LINE L1 -337 5543 4108 4 903 351 0 0 0 chr15 41793303 41793342 -61701632 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 903 6022 166 310 21 chr15 41793342 41793904 -61701070 - Lx6 LINE L1 -1773 4107 3559 4 903 23 0 0 0 chr15 41794201 41794224 -61700750 + AT_rich Low_complexity Low_complexity 1 23 0 4 903 685 198 6 37 chr15 41794544 41794707 -61700267 + L1_Mur3 LINE L1 40 197 -7515 4 903 476 306 33 40 chr15 41795125 41795275 -61699699 + B4 SINE B4 69 217 -75 4 903 243 242 50 0 chr15 41795623 41795722 -61699252 + (CATATA)n Simple_repeat Simple_repeat 4 107 0 4 903 246 292 71 48 chr15 41795747 41795873 -61699101 - MER112 DNA MER1_type -93 168 40 4 903 266 307 70 111 chr15 41796677 41796849 -61698125 + Charlie15a DNA MER1_type 1 165 -59 4 903 230 340 59 10 chr15 41797419 41797520 -61697454 + MIR SINE MIR 53 158 -104 4 903 4026 82 2 11 chr15 41798352 41798893 -61696081 + L1_Mus2 LINE L1 6030 6565 -1 4 903 189 0 0 0 chr15 41798905 41798926 -61696048 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 4 903 2853 270 137 30 chr15 41799456 41800588 -61694386 - Lx8 LINE L1 -3 7470 6218 4 903 297 0 0 0 chr15 41800621 41800654 -61694320 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 903 699 221 0 16 chr15 41800654 41800778 -61694196 - B1_Mur2 SINE Alu -25 124 3 4 903 1382 34 6 0 chr15 41800931 41801107 -61693867 + (TCTA)n Simple_repeat Simple_repeat 4 180 0 4 903 1603 210 31 3 chr15 41801108 41801455 -61693519 + ORR1B1-int LTR MaLR 44 485 -1250 4 903 516 283 97 40 chr15 41801803 41802031 -61692943 - MLT1A0 LTR MaLR -18 347 107 4 903 198 0 0 0 chr15 41802102 41802124 -61692850 + (A)n Simple_repeat Simple_repeat 1 22 0 4 903 351 0 0 0 chr15 41802185 41802224 -61692750 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 903 1887 125 112 35 chr15 41803126 41803466 -61691508 + ORR1B2 LTR MaLR 1 366 -1 4 903 272 25 50 0 chr15 41805494 41805534 -61689440 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 4 903 1121 59 0 0 chr15 41805535 41805670 -61689304 - B1_Mus2 SINE Alu -12 135 1 4 903 246 321 61 18 chr15 41806462 41806576 -61688398 - MIR SINE MIR -20 242 124 4 903 342 0 0 0 chr15 41807171 41807209 -61687765 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 903 200 333 48 0 chr15 41807855 41807960 -61687014 - MIRb SINE MIR -58 210 101 4 903 189 304 96 21 chr15 41808115 41808209 -61686765 - MIR SINE MIR -6 256 156 4 903 1896 114 57 7 chr15 41808391 41808690 -61686284 - ORR1A2 LTR MaLR 0 327 14 4 903 1116 253 35 4 chr15 41808704 41808962 -61686012 + MTD LTR MaLR 154 419 0 4 903 611 180 7 0 chr15 41809035 41809185 -61685789 + (CA)n Simple_repeat Simple_repeat 1 151 0 4 903 625 320 24 87 chr15 41809194 41809526 -61685448 + RLTR17 LTR ERVK 80 390 -302 4 903 384 250 112 13 chr15 41809706 41809936 -61685038 - L1MA4A LINE L1 -1799 5897 5638 4 903 227 179 36 0 chr15 41810052 41810108 -61684866 + T-rich Low_complexity Low_complexity 3 60 0 4 903 251 93 23 0 chr15 41810101 41810144 -61684830 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 4 903 5096 184 27 3 chr15 41810145 41811080 -61683894 - Lx5 LINE L1 -12 7038 6082 4 112 6711 143 35 8 chr15 41811080 41812496 -61682478 + Lx5 LINE L1 4636 6091 -959 4 904 240 289 30 38 chr15 41812815 41812948 -61682026 - L1_Rod LINE L1 -631 5216 5085 4 904 241 333 10 0 chr15 41813045 41813144 -61681830 - L1MA4A LINE L1 -1156 4987 4888 4 904 396 0 0 0 chr15 41813155 41813199 -61681775 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 904 266 47 0 44 chr15 41813308 41813353 -61681621 + (CAAAAA)n Simple_repeat Simple_repeat 2 44 0 4 904 198 91 0 0 chr15 41813402 41813435 -61681539 + (A)n Simple_repeat Simple_repeat 1 33 0 4 904 3916 68 19 6 chr15 41814026 41814543 -61680431 + L1Md_F2 LINE L1 6059 6582 0 4 904 2315 218 26 24 chr15 41814590 41815126 -61679848 - Lx5 LINE L1 -8 7042 6506 4 904 308 317 13 20 chr15 41815128 41815239 -61679735 - PB1D7 SINE Alu -11 116 1 4 904 27 0 0 0 chr15 41816171 41816198 -61678776 + AT_rich Low_complexity Low_complexity 1 27 0 4 904 298 341 73 0 chr15 41816209 41816332 -61678642 + MER20B DNA MER1_type 315 446 -337 4 904 2814 180 28 31 chr15 41816436 41817014 -61677960 - RLTR20B3 LTR ERVK -1 576 1 4 904 466 228 23 8 chr15 41817408 41817517 -61677457 - PB1D10 SINE Alu -21 126 21 4 904 230 343 10 0 chr15 41817815 41817914 -61677060 - L1MEf LINE L1 -4600 1600 1501 4 904 300 53 0 0 chr15 41818368 41818406 -61676568 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 904 917 251 44 16 chr15 41818916 41819194 -61675780 + ORR1D1 LTR MaLR 1 283 -87 4 904 743 201 93 29 chr15 41819182 41819387 -61675587 + ORR1D1 LTR MaLR 167 384 0 4 904 24 0 0 0 chr15 41819440 41819464 -61675510 + AT_rich Low_complexity Low_complexity 1 24 0 4 904 200 260 0 27 chr15 41821206 41821254 -61673720 + T-rich Low_complexity Low_complexity 27 73 0 4 904 577 137 25 17 chr15 41821254 41821373 -61673601 - Lx3A LINE L1 -3 6978 6859 4 904 200 260 0 27 chr15 41821373 41821399 -61673575 + T-rich Low_complexity Low_complexity 1 26 0 4 904 1431 50 0 0 chr15 41821633 41821813 -61673161 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 4 904 222 37 0 0 chr15 41821814 41821841 -61673133 + (TTTC)n Simple_repeat Simple_repeat 4 30 0 4 904 1057 95 0 13 chr15 41821842 41821991 -61672983 - B1_Mus2 SINE Alu 0 147 1 4 904 23 33 0 0 chr15 41822266 41822296 -61672678 + AT_rich Low_complexity Low_complexity 1 30 0 4 904 1687 230 71 8 chr15 41822616 41823010 -61671964 - MTD LTR MaLR 0 419 1 4 904 1436 71 22 0 chr15 41823313 41823496 -61671478 - B2_Mm1t SINE B2 -6 187 1 4 904 885 228 62 5 chr15 41823503 41823697 -61671277 - B3 SINE B2 -11 205 1 4 904 2981 32 0 0 chr15 41824051 41824397 -61670577 - ORR1A1 LTR MaLR 0 346 1 4 904 642 60 0 0 chr15 41825148 41825231 -61669743 + (TG)n Simple_repeat Simple_repeat 2 84 0 4 904 484 331 49 12 chr15 41825234 41825396 -61669578 - B3A SINE B2 -30 168 1 4 904 303 280 13 0 chr15 41825670 41825745 -61669229 - MER5A1 DNA MER1_type -90 76 1 4 904 270 136 0 0 chr15 41826314 41826358 -61668616 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 904 963 322 11 0 chr15 41826401 41826687 -61668287 - B4A SINE B4 0 292 4 4 904 7120 71 5 8 chr15 41826938 41828061 -61666913 - L1_Mus2 LINE L1 0 6566 5447 4 904 6604 74 13 9 chr15 41828057 41828986 -61665988 - L1_Mus2 LINE L1 0 6566 5634 4 904 2488 195 59 5 chr15 41828983 41829544 -61665430 - L1Md_F LINE L1 -5452 1067 477 4 904 1329 73 0 0 chr15 41830781 41830959 -61664015 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 4 904 645 111 17 17 chr15 41830959 41831078 -61663896 + (TTCC)n Simple_repeat Simple_repeat 3 121 0 4 904 1232 54 0 0 chr15 41831084 41831231 -61663743 - B1_Mus2 SINE Alu 0 147 1 4 904 7113 56 1 9 chr15 41831405 41832361 -61662613 - L1Md_F2 LINE L1 0 6582 5635 4 904 894 325 50 36 chr15 41832737 41833232 -61661742 + MTE-int LTR MaLR 1 502 -1078 4 904 493 240 8 0 chr15 41833658 41833781 -61661193 - Lx8 LINE L1 -668 7028 6915 4 904 9027 3 0 0 chr15 41833809 41835180 -61659794 - L1Md_A LINE L1 0 6582 5212 5 904 1004 291 65 32 chr15 41835217 41835586 -61659388 + Lx8 LINE L1 6437 6817 -656 5 904 745 263 196 27 chr15 41835615 41835746 -61659228 - L1MA9 LINE L1 -348 5964 5790 5 904 183 42 0 0 chr15 41835746 41835770 -61659204 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 904 745 283 169 23 chr15 41835770 41836564 -61658410 - L1MA9 LINE L1 -523 5789 4897 5 904 4505 76 3 7 chr15 41837177 41837784 -61657190 - Lx3_Mus LINE L1 -144 5742 5138 5 904 7850 107 42 10 chr15 41837757 41838967 -61656007 + Lx3_Mus LINE L1 5736 6986 -23 5 904 252 0 0 0 chr15 41838967 41838995 -61655979 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 5 904 1047 269 129 6 chr15 41839362 41839973 -61655001 + RCHARR1 DNA MER1_type 4 974 0 5 904 252 0 0 0 chr15 41840271 41840299 -61654675 + (T)n Simple_repeat Simple_repeat 1 28 0 5 904 1404 51 0 0 chr15 41840330 41840507 -61654467 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 5 904 394 276 76 25 chr15 41840507 41840626 -61654348 - ID_B1 SINE B4 -12 212 88 5 904 656 319 90 22 chr15 41841281 41841413 -61653561 - MLT2B4 LTR ERVL -163 393 256 5 904 695 87 0 9 chr15 41841413 41841518 -61653456 + (TTA)n Simple_repeat Simple_repeat 2 105 0 5 904 656 319 90 22 chr15 41841518 41841544 -61653430 - MLT2B4 LTR ERVL -301 255 227 5 904 3943 77 25 5 chr15 41841544 41842104 -61652870 - Lx3_Mus LINE L1 -11 6998 6428 5 904 656 319 90 22 chr15 41842104 41842312 -61652662 - MLT2B4 LTR ERVL -330 226 2 5 904 2135 91 68 34 chr15 41842325 41842678 -61652296 + Lx2 LINE L1 6633 6997 0 5 904 2260 175 87 25 chr15 41842913 41843441 -61651533 - RLTR31_Mm LTR ERVK 0 561 1 5 904 1349 61 0 6 chr15 41845372 41845553 -61649421 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 5 904 1254 95 0 0 chr15 41845559 41846098 -61648876 + (TTCCC)n Simple_repeat Simple_repeat 1 539 0 5 904 1032 29 16 55 chr15 41846112 41846295 -61648679 + (TTCC)n Simple_repeat Simple_repeat 3 178 0 5 904 1891 192 92 13 chr15 41846295 41846686 -61648288 - Lx5 LINE L1 -15 7035 6614 5 904 414 0 0 0 chr15 41847008 41847054 -61647920 + (TTA)n Simple_repeat Simple_repeat 3 48 0 5 904 33258 78 3 36 chr15 41847054 41848656 -61646318 - L1Md_F2 LINE L1 -24 6558 5156 5 904 2904 28 11 8 chr15 41848656 41849012 -61645962 - L1Md_F3 LINE L1 0 6584 6228 5 904 33258 70 3 56 chr15 41849012 41850247 -61644727 - L1Md_F2 LINE L1 -728 5155 3931 5 904 1100 52 0 19 chr15 41850247 41850405 -61644569 - L1Md_F3 LINE L1 0 6584 6430 5 904 33258 84 16 43 chr15 41850405 41853976 -61640998 - L1Md_F2 LINE L1 -1953 3930 364 5 904 398 333 29 23 chr15 41854134 41854306 -61640668 + MER5B DNA MER1_type 6 178 0 5 904 316 234 171 33 chr15 41854314 41854495 -61640479 - L1M5 LINE L1 -1633 4513 4308 5 904 517 346 26 0 chr15 41854751 41854907 -61640067 - RSINE1 SINE B4 -1 164 5 5 904 351 0 0 0 chr15 41855043 41855082 -61639892 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 904 784 319 35 46 chr15 41855387 41855670 -61639304 + B4A SINE B4 13 292 0 5 904 21 89 0 0 chr15 41856885 41856941 -61638033 + AT_rich Low_complexity Low_complexity 1 56 0 5 904 8224 43 6 3 chr15 41857000 41858682 -61636292 - L1Md_F3 LINE L1 -5 6579 4893 5 904 199 71 48 0 chr15 41859420 41859462 -61635512 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 904 880 242 205 7 chr15 41860105 41860408 -61634566 + MTE2a LTR MaLR 17 379 0 5 904 1394 205 127 65 chr15 41860469 41860664 -61634310 - ORR1C2 LTR MaLR 0 384 167 5 904 516 45 0 0 chr15 41860664 41860731 -61634243 + (CA)n Simple_repeat Simple_repeat 2 68 0 5 904 288 0 0 0 chr15 41860731 41860762 -61634212 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 904 1394 205 127 65 chr15 41860762 41860920 -61634054 - ORR1C2 LTR MaLR -218 166 9 5 904 1917 138 27 12 chr15 41861585 41861915 -61633059 - RLTR13D5 LTR ERVK -5 1109 775 5 904 275 71 24 0 chr15 41864545 41864587 -61630387 + (AGGGGG)n Simple_repeat Simple_repeat 5 47 0 5 904 4753 114 19 27 chr15 41865476 41866216 -61628758 - RLTR13D5 LTR ERVK -289 734 1 5 904 240 258 16 16 chr15 41866244 41866307 -61628667 - MLT1D LTR MaLR -348 157 95 5 904 400 248 154 0 chr15 41866307 41866424 -61628550 + Lx8 LINE L1 6961 7095 -378 5 904 279 286 103 56 chr15 41866427 41866553 -61628421 - MER21B LTR ERV1 -260 603 472 5 904 989 64 0 14 chr15 41866658 41866801 -61628173 + L1_Mus2 LINE L1 6426 6566 0 5 904 399 154 35 7 chr15 41866900 41867047 -61627927 + CT-rich Low_complexity Low_complexity 1 151 0 5 904 232 343 170 7 chr15 41867076 41867217 -61627757 - MER21B LTR ERV1 -687 176 13 5 904 328 307 102 58 chr15 41867263 41867626 -61627348 - L1MEe LINE L1 -3969 885 507 5 904 1021 178 0 6 chr15 41867916 41868097 -61626877 - B2_Mm2 SINE B2 -14 181 2 5 904 270 0 0 0 chr15 41868168 41868198 -61626776 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 904 445 287 88 66 chr15 41868501 41868736 -61626238 - L1MA4 LINE L1 -281 6019 5775 5 904 348 64 0 0 chr15 41868736 41868783 -61626191 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 904 445 296 47 58 chr15 41868783 41868864 -61626110 - L1MA4 LINE L1 -526 5774 5696 5 904 22 35 0 0 chr15 41869215 41869244 -61625730 + AT_rich Low_complexity Low_complexity 1 29 0 5 904 914 237 165 31 chr15 41869714 41870041 -61624933 + Lx8 LINE L1 6780 7150 -323 5 904 1405 172 212 3 chr15 41870041 41870367 -61624607 - ORR1B1 LTR MaLR 0 394 1 5 904 5729 193 40 17 chr15 41870367 41871550 -61623424 - ORR1B1-int LTR MaLR 0 1509 300 5 904 703 278 145 11 chr15 41871566 41871842 -61623132 + Lx8 LINE L1 7156 7468 -5 5 904 399 41 0 0 chr15 41872887 41872936 -61622038 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 904 205 137 0 56 chr15 41873177 41873231 -61621743 + T-rich Low_complexity Low_complexity 2 52 0 5 904 33 43 0 0 chr15 41873309 41873356 -61621618 + AT_rich Low_complexity Low_complexity 1 47 0 5 904 227 331 98 49 chr15 41873637 41873821 -61621153 - MLT1I LTR MaLR -29 382 190 5 904 211 222 37 0 chr15 41874273 41874327 -61620647 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 904 269 362 154 14 chr15 41874329 41874472 -61620502 - RSINE1 SINE B4 0 165 3 5 904 497 240 169 27 chr15 41874914 41875250 -61619724 - Lx9 LINE L1 -1738 5906 5510 5 904 1659 303 92 99 chr15 41875258 41876232 -61618742 - Lx8 LINE L1 -9 7464 6496 5 904 3326 90 35 8 chr15 41876232 41876715 -61618259 - L1Md_F2 LINE L1 -1 6581 6086 5 904 1659 303 92 99 chr15 41876715 41876790 -61618184 - Lx8 LINE L1 -978 6495 6422 5 904 939 169 24 0 chr15 41876806 41876972 -61618002 + MT2A LTR ERVL 29 198 -335 5 904 948 239 6 0 chr15 41876973 41877153 -61617821 - B3 SINE B2 -34 182 2 5 904 24 53 0 0 chr15 41877575 41877613 -61617361 + AT_rich Low_complexity Low_complexity 1 38 0 5 904 564 292 17 12 chr15 41877620 41877777 -61617197 - B3A SINE B2 -35 181 32 5 904 504 48 0 0 chr15 41877778 41877841 -61617133 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 5 904 842 264 41 5 chr15 41877862 41878056 -61616918 - B3 SINE B2 -15 201 1 5 904 219 69 0 0 chr15 41880221 41880250 -61614724 + (A)n Simple_repeat Simple_repeat 1 29 0 5 904 332 300 0 0 chr15 41880380 41880480 -61614494 - L2 LINE L2 -1022 2397 2298 5 904 308 281 121 35 chr15 41880947 41881120 -61613854 + MLT1L LTR MaLR 421 608 -2 5 904 322 243 0 0 chr15 41881128 41881202 -61613772 + Lx9 LINE L1 7384 7457 -187 5 904 276 91 0 0 chr15 41881202 41881246 -61613728 + (TA)n Simple_repeat Simple_repeat 1 44 0 5 904 32 26 0 0 chr15 41881330 41881369 -61613605 + AT_rich Low_complexity Low_complexity 1 39 0 5 904 29 28 0 0 chr15 41881714 41881750 -61613224 + AT_rich Low_complexity Low_complexity 1 36 0 5 904 489 324 0 14 chr15 41881853 41881997 -61612977 + B1F SINE Alu 6 147 -2 5 904 351 0 0 0 chr15 41883187 41883226 -61611748 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 904 920 116 6 0 chr15 41883226 41883397 -61611577 + (GA)n Simple_repeat Simple_repeat 1 173 0 5 904 1051 225 166 30 chr15 41883780 41884147 -61610827 + MTD LTR MaLR 3 419 0 5 904 3757 206 75 23 chr15 41884924 41885486 -61609488 - Lx9 LINE L1 0 7644 7027 5 904 3794 45 2 0 chr15 41885486 41885948 -61609026 - L1_Mus1 LINE L1 0 6567 6105 5 904 3757 206 75 23 chr15 41885948 41886339 -61608635 - Lx9 LINE L1 -618 7026 6641 5 904 747 248 123 22 chr15 41886345 41886621 -61608353 - Lx9 LINE L1 -1149 6495 6192 5 904 1255 290 84 39 chr15 41888719 41889364 -61605610 + L1MC1 LINE L1 5561 6234 -99 5 904 2270 223 63 41 chr15 41890845 41891146 -61603828 + Lx9 LINE L1 6977 7286 -358 5 904 2519 52 64 9 chr15 41891146 41891474 -61603500 + ORR1A1 LTR MaLR 1 346 0 5 904 13559 58 16 2 chr15 41891474 41893241 -61601733 + ORR1A1-int LTR MaLR 1 1792 0 5 904 2146 83 102 0 chr15 41893241 41893555 -61601419 + ORR1A1 LTR MaLR 1 346 0 5 904 2270 223 63 41 chr15 41893555 41893905 -61601069 + Lx9 LINE L1 7287 7642 -2 5 904 268 376 26 13 chr15 41894484 41894635 -61600339 - MLT1E1 LTR MaLR -8 646 494 5 904 234 0 0 0 chr15 41895146 41895172 -61599802 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 904 27 0 0 0 chr15 41895339 41895366 -61599608 + AT_rich Low_complexity Low_complexity 1 27 0 5 904 185 385 25 8 chr15 41896081 41896199 -61598775 - L2 LINE L2 -545 2874 2755 5 904 295 360 80 9 chr15 41896412 41896524 -61598450 + ID_B1 SINE B4 84 203 -21 5 904 513 281 109 36 chr15 41897107 41897429 -61597545 - LTR52 LTR ERVL -2 419 74 5 904 540 106 0 0 chr15 41897429 41897523 -61597451 + (TG)n Simple_repeat Simple_repeat 2 95 0 5 904 962 122 4 4 chr15 41897535 41897783 -61597191 + (TG)n Simple_repeat Simple_repeat 1 248 0 5 904 864 157 4 0 chr15 41897794 41898057 -61596917 + (TG)n Simple_repeat Simple_repeat 1 263 0 5 904 776 365 58 34 chr15 41898161 41898663 -61596311 - LTR52-int LTR ERVL -62 3494 2981 5 904 2949 69 51 0 chr15 41898990 41899381 -61595593 - RLTR10A LTR ERVK 0 411 1 5 904 789 315 25 52 chr15 41899630 41899998 -61594976 - LTR52-int LTR ERVL -3198 358 1 5 904 23 54 0 0 chr15 41900341 41900378 -61594596 + AT_rich Low_complexity Low_complexity 1 37 0 5 904 22 35 0 0 chr15 41902470 41902499 -61592475 + AT_rich Low_complexity Low_complexity 1 29 0 5 904 630 37 0 0 chr15 41902514 41902595 -61592379 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 5 904 23 0 0 0 chr15 41902889 41902912 -61592062 + AT_rich Low_complexity Low_complexity 1 23 0 5 904 3009 56 10 5 chr15 41903698 41904090 -61590884 - L1Md_F3 LINE L1 -14 6570 6177 5 904 444 302 22 93 chr15 41904179 41904405 -61590569 - MTEb LTR MaLR -118 261 52 5 904 292 280 168 29 chr15 41904259 41904432 -61590542 - MLT2B3 LTR ERVL -328 226 30 5 904 279 79 0 0 chr15 41904621 41904659 -61590315 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 904 967 288 109 25 chr15 41906986 41907388 -61587586 - MLT1D LTR MaLR -1 504 69 5 904 1525 144 31 15 chr15 41907433 41907694 -61587280 - ORR1A2 LTR MaLR -62 265 1 5 904 387 0 0 0 chr15 41907768 41907811 -61587163 + (T)n Simple_repeat Simple_repeat 1 43 0 5 904 306 0 0 0 chr15 41908042 41908076 -61586898 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 904 252 0 0 0 chr15 41908076 41908103 -61586871 + (GA)n Simple_repeat Simple_repeat 2 29 0 6 904 196 254 14 43 chr15 41908205 41908275 -61586699 + L2c LINE L2 3188 3255 -132 6 904 750 272 48 0 chr15 41908712 41908918 -61586056 + B3 SINE B2 1 216 0 6 904 346 247 12 12 chr15 41908922 41909004 -61585970 + ID_B1 SINE B4 143 224 0 6 904 209 155 17 0 chr15 41909074 41909132 -61585842 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 904 567 331 54 40 chr15 41909605 41909957 -61585017 + L2a LINE L2 3062 3418 -8 6 904 29 60 0 0 chr15 41910838 41910888 -61584086 + AT_rich Low_complexity Low_complexity 1 50 0 6 904 267 31 0 0 chr15 41910958 41910990 -61583984 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 904 487 170 25 104 chr15 41911642 41911840 -61583134 + L1_Mur2 LINE L1 1933 2107 -3770 6 904 40 0 0 0 chr15 41911840 41911880 -61583094 + AT_rich Low_complexity Low_complexity 1 40 0 6 904 1882 242 63 2 chr15 41911881 41912418 -61582556 - Lx3C LINE L1 -2 6998 6422 6 904 1360 236 36 6 chr15 41912410 41912768 -61582206 + L1_Mur2 LINE L1 2091 2459 -3418 6 904 228 74 54 36 chr15 41914651 41914707 -61580267 + (TCTCTG)n Simple_repeat Simple_repeat 2 58 0 6 904 476 255 78 0 chr15 41914745 41914847 -61580127 - ID_B1 SINE B4 -28 196 87 6 904 702 229 29 0 chr15 41915160 41915330 -61579644 - RMER5 LTR ERV1 -17 517 343 6 904 1137 264 71 54 chr15 41915797 41916405 -61578569 - L1M4 LINE L1 -1968 4178 3561 6 904 597 251 115 28 chr15 41916531 41916830 -61578144 + MTD LTR MaLR 68 415 -4 6 904 198 0 0 0 chr15 41916975 41916997 -61577977 + (TTTTTA)n Simple_repeat Simple_repeat 3 24 0 6 904 628 343 85 19 chr15 41917869 41918282 -61576692 - MLT1C LTR MaLR -9 458 19 6 904 38 39 0 0 chr15 41918782 41918834 -61576140 + AT_rich Low_complexity Low_complexity 1 52 0 6 904 229 308 13 13 chr15 41918907 41918986 -61575988 + L3 LINE CR1 3663 3741 -748 6 904 453 325 64 13 chr15 41919905 41920061 -61574913 + RSINE1 SINE B4 2 165 0 6 904 180 224 98 76 chr15 41920359 41920451 -61574523 + L4 LINE RTE 323 416 -1613 6 904 338 313 124 39 chr15 41920708 41920861 -61574113 - MER20 DNA MER1_type -52 167 2 6 904 28 0 0 0 chr15 41921141 41921169 -61573805 + AT_rich Low_complexity Low_complexity 1 28 0 6 904 473 289 0 10 chr15 41921892 41921990 -61572984 + RSINE1 SINE B4 3 99 -66 6 904 299 318 48 96 chr15 41921986 41922195 -61572779 + MLT1A LTR MaLR 9 207 -167 6 904 633 115 0 0 chr15 41922503 41922599 -61572375 + (TCCG)n Simple_repeat Simple_repeat 4 99 0 6 904 837 125 34 51 chr15 41922784 41922961 -61572013 + Lx LINE L1 6478 6651 -3 6 904 300 288 125 44 chr15 41923298 41923458 -61571516 - B4 SINE B4 -10 282 110 6 904 21 0 0 0 chr15 41923553 41923574 -61571400 + AT_rich Low_complexity Low_complexity 1 21 0 6 904 33 43 0 0 chr15 41924384 41924431 -61570543 + AT_rich Low_complexity Low_complexity 1 47 0 6 904 254 154 0 58 chr15 41924511 41924616 -61570358 + A-rich Low_complexity Low_complexity 1 98 0 6 904 5608 87 17 1 chr15 41924655 41925436 -61569538 - Lx3_Mus LINE L1 0 7009 6217 6 904 818 212 136 0 chr15 41925460 41925644 -61569330 - B3 SINE B2 -6 210 2 6 904 567 330 72 85 chr15 41925734 41926052 -61568922 - ORR1E LTR MaLR -40 319 6 6 904 2833 165 10 2 chr15 41926291 41926796 -61568178 - L1_Mus4 LINE L1 -506 5377 4869 6 904 7549 97 11 5 chr15 41926787 41928003 -61566971 + L1_Mus4 LINE L1 5409 6631 -5 6 904 822 236 127 0 chr15 41928008 41928245 -61566729 + RMER1B Other Other 797 1063 -3 6 904 1354 260 122 5 chr15 41928887 41929255 -61565719 - MTD LTR MaLR -8 411 1 6 904 285 260 13 0 chr15 41929262 41929339 -61565635 - L1MA5 LINE L1 -47 6244 6167 6 904 300 91 0 0 chr15 41929339 41929383 -61565591 + (TTA)n Simple_repeat Simple_repeat 2 45 0 6 904 286 342 16 5 chr15 41929503 41929694 -61565280 - L1MA5 LINE L1 -294 6006 5814 6 904 8400 85 64 0 chr15 41929688 41931827 -61563147 - L1Md_F2 LINE L1 -1 6581 4113 6 904 392 269 101 20 chr15 41931835 41931983 -61562991 - L1M2 LINE L1 -476 5821 5662 6 904 782 315 88 42 chr15 41932238 41932622 -61562352 + MLT1G1 LTR MaLR 170 571 -8 6 904 37 23 0 0 chr15 41932699 41932743 -61562231 + AT_rich Low_complexity Low_complexity 1 44 0 6 904 408 255 97 21 chr15 41933727 41933871 -61561103 - B4 SINE B4 -137 155 1 6 904 485 248 54 39 chr15 41934031 41934234 -61560740 + Lx4B LINE L1 6790 7041 -17 6 904 255 245 99 69 chr15 41934421 41934522 -61560452 - MTEa LTR MaLR -271 108 5 6 904 1337 90 11 5 chr15 41934604 41934793 -61560181 - B2_Mm2 SINE B2 -2 193 4 6 904 263 318 35 85 chr15 41936111 41936252 -61558722 + MIRb SINE MIR 112 245 -23 6 904 390 127 0 0 chr15 41937008 41937079 -61557895 + (GA)n Simple_repeat Simple_repeat 1 71 0 6 904 238 167 24 0 chr15 41937085 41937127 -61557847 - Lx5 LINE L1 -294 6756 6714 6 904 420 248 5 2 chr15 41937132 41937231 -61557743 - MTC LTR MaLR -295 101 1 6 904 234 276 29 26 chr15 41937240 41937316 -61557658 - LTR48B LTR ERV1 -444 200 110 6 904 296 238 80 59 chr15 41938195 41938372 -61556602 + MER34A LTR ERV1 9 192 -350 6 904 426 20 0 0 chr15 41939426 41939477 -61555497 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 904 29 47 0 0 chr15 41939511 41939554 -61555420 + AT_rich Low_complexity Low_complexity 1 43 0 6 904 394 346 24 54 chr15 41939777 41939945 -61555029 + RSINE1 SINE B4 3 165 0 6 904 233 370 70 45 chr15 41940025 41940226 -61554748 - MIRb SINE MIR -40 228 23 6 904 189 74 0 0 chr15 41940609 41940636 -61554338 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 6 904 2396 166 31 2 chr15 41940683 41941131 -61553843 - RMER6B LTR ERVK 0 461 1 6 904 1039 313 51 3 chr15 41941737 41942029 -61552945 + MTEa LTR MaLR 74 379 0 6 904 589 274 92 52 chr15 41942890 41942992 -61551982 - Lx9 LINE L1 -20 7624 7506 6 1 627 108 0 0 chr15 41942992 41943085 -61551889 + (TA)n Simple_repeat Simple_repeat 1 93 0 6 905 589 274 92 52 chr15 41943085 41943329 -61551645 - Lx9 LINE L1 -139 7505 7264 6 905 21 0 0 0 chr15 41945427 41945448 -61549526 + AT_rich Low_complexity Low_complexity 1 21 0 6 905 225 320 12 49 chr15 41946423 41946505 -61548469 - LTR16A1 LTR ERVL -331 125 47 6 905 270 0 0 0 chr15 41948394 41948424 -61546550 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 6 905 341 291 96 23 chr15 41949961 41950179 -61544795 - L1MA8 LINE L1 -42 6249 6016 6 905 794 258 30 30 chr15 41950307 41950507 -61544467 - ORR1D1 LTR MaLR 0 374 169 6 905 477 0 0 0 chr15 41950507 41950560 -61544414 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 905 495 0 0 0 chr15 41950560 41950614 -61544360 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 905 794 258 30 30 chr15 41950614 41950648 -61544326 - ORR1D1 LTR MaLR -206 168 140 6 905 480 311 124 16 chr15 41950874 41951067 -61543907 + B3 SINE B2 3 216 0 6 905 769 250 115 0 chr15 41951749 41952045 -61542929 + L1_Mur3 LINE L1 871 1200 -6512 6 905 23158 136 32 27 chr15 41952044 41956560 -61538414 - L1Md_F LINE L1 -1116 4767 233 6 905 275 196 18 18 chr15 41956560 41956617 -61538357 + RLTR11A LTR ERVK 445 501 -27 6 905 2871 273 39 53 chr15 41956640 41957506 -61537468 + Lx5 LINE L1 6179 7032 -18 6 905 760 299 94 27 chr15 41957802 41958132 -61536842 + MLT1A LTR MaLR 18 369 -5 6 905 308 360 29 7 chr15 41958510 41958650 -61536324 + LTR33C LTR ERVL 3 145 -484 6 905 442 309 129 63 chr15 41958679 41959073 -61535901 + MLT2F LTR ERVL 243 662 -1 6 905 739 257 41 27 chr15 41960120 41960340 -61534634 + Lx8 LINE L1 7247 7469 -4 6 905 292 317 37 0 chr15 41960634 41960795 -61534179 + L1M5 LINE L1 5700 5866 -258 6 905 563 195 8 0 chr15 41962411 41962534 -61532440 + GA-rich Low_complexity Low_complexity 2 125 0 6 905 346 317 19 9 chr15 41962811 41962916 -61532058 + PB1D7 SINE Alu 15 120 0 6 905 25 31 0 0 chr15 41963469 41963501 -61531473 + AT_rich Low_complexity Low_complexity 1 32 0 6 905 214 137 26 40 chr15 41964190 41964266 -61530708 + T-rich Low_complexity Low_complexity 2 76 0 6 905 1172 75 0 0 chr15 41964272 41964418 -61530556 - B1_Mus1 SINE Alu 0 148 3 6 905 354 277 88 22 chr15 41964667 41964848 -61530126 - MER53 DNA hAT 0 193 1 6 905 3231 62 14 16 chr15 41965117 41965560 -61529414 - L1Md_F2 LINE L1 -3 6579 6138 6 905 449 280 53 0 chr15 41965924 41966131 -61528843 + L1MA7 LINE L1 5257 5474 -829 6 905 343 237 28 34 chr15 41966204 41966383 -61528591 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 6 905 399 313 93 25 chr15 41966424 41966480 -61528494 + L1MA7 LINE L1 5484 5552 -748 6 905 4305 152 12 10 chr15 41966480 41967170 -61527804 - RLTR17 LTR ERVK 0 692 2 6 905 498 297 45 33 chr15 41967170 41967450 -61527524 + L1MA7 LINE L1 5506 5829 -462 6 905 32293 84 2 5 chr15 41968046 41973489 -61521485 + L1Md_F2 LINE L1 62 5589 -297 6 905 8071 40 5 2 chr15 41973489 41974480 -61520494 + L1Md_F2 LINE L1 5590 6583 -2 6 905 14745 152 13 4 chr15 41974867 41978337 -61516637 - Lx LINE L1 -5 6649 3152 6 905 1357 193 22 11 chr15 41978337 41978614 -61516360 - ORR1B1-int LTR MaLR -1132 377 98 6 905 6984 180 21 11 chr15 41978614 41980198 -61514776 + Lx3C LINE L1 5373 6974 -2 6 905 437 114 43 0 chr15 41980205 41980275 -61514699 - ORR1B1-int LTR MaLR -1403 106 34 6 905 2117 159 11 6 chr15 41980563 41980917 -61514057 + ORR1B2 LTR MaLR 4 359 -8 6 905 231 182 0 113 chr15 41980921 41980983 -61513991 + ORR1B2-int LTR MaLR 1 55 -1454 6 905 24 32 0 0 chr15 41982081 41982112 -61512862 + AT_rich Low_complexity Low_complexity 1 31 0 6 905 2472 291 58 24 chr15 41982378 41983209 -61511765 - Lx7 LINE L1 -615 7081 6223 6 905 445 330 31 10 chr15 41983257 41983450 -61511524 - B3 SINE B2 -19 197 1 6 905 258 345 89 18 chr15 41983621 41983733 -61511241 - PB1D7 SINE Alu 0 120 1 6 905 828 30 0 0 chr15 41984436 41984443 -61510531 + (TTC)n Simple_repeat Simple_repeat 3 9 0 7 905 1175 102 6 0 chr15 41984443 41984620 -61510354 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 7 905 828 30 0 0 chr15 41984620 41984713 -61510261 + (TTC)n Simple_repeat Simple_repeat 3 95 0 7 905 276 77 0 0 chr15 41984877 41984916 -61510058 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 905 406 291 29 0 chr15 41984954 41985057 -61509917 - PB1D9 SINE Alu -14 106 1 7 905 3822 89 15 8 chr15 41985256 41985785 -61509189 - L1_Mus1 LINE L1 -3 6564 6032 7 905 15129 137 17 54 chr15 41985785 41987443 -61507531 - L1Md_F LINE L1 -1776 4107 2438 7 905 3558 79 0 40 chr15 41987443 41987943 -61507031 - L1_Mus1 LINE L1 -1 6566 6087 7 905 15129 161 39 34 chr15 41987943 41990442 -61504532 - L1Md_F LINE L1 -3446 2437 98 7 905 222 368 140 0 chr15 41991410 41991524 -61503450 + ID_B1 SINE B4 82 211 -13 7 905 419 273 116 29 chr15 41991542 41991923 -61503051 + L1M2 LINE L1 2764 3177 -2966 7 905 780 254 10 15 chr15 41992028 41992228 -61502746 - Tigger1 DNA MER2_type -393 2025 1827 7 905 573 262 81 16 chr15 41992244 41992260 -61502714 - B3A SINE B2 0 198 184 7 905 234 62 0 0 chr15 41992260 41992292 -61502682 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 905 573 262 81 16 chr15 41992292 41992461 -61502513 - B3A SINE B2 -15 183 1 7 905 746 255 33 5 chr15 41992461 41992670 -61502304 - Tigger1 DNA MER2_type -608 1810 1596 7 905 286 209 279 0 chr15 41992742 41992828 -61502146 - Tigger1 DNA MER2_type -1300 1118 1009 7 905 1035 162 100 36 chr15 41992842 41993091 -61501883 + Lx7 LINE L1 5158 5422 -458 7 905 2454 224 70 20 chr15 41993471 41994017 -61500957 + Lx5 LINE L1 6477 7049 -1 7 905 835 219 44 61 chr15 41994064 41994360 -61500614 + Lx7 LINE L1 5947 6237 -1459 7 905 724 274 28 103 chr15 41994383 41994704 -61500270 - Lx9 LINE L1 -998 6646 6350 7 905 345 47 0 0 chr15 41994704 41994747 -61500227 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 905 540 285 100 40 chr15 41994811 41995023 -61499951 - MTD LTR MaLR -115 292 92 7 905 8854 126 19 13 chr15 41995032 41996412 -61498562 - Lx3B LINE L1 0 7058 5601 7 905 3518 129 6 45 chr15 41996401 41997044 -61497930 + L1_Mur1 LINE L1 4725 5342 -544 7 905 22 0 0 0 chr15 41997141 41997163 -61497811 + AT_rich Low_complexity Low_complexity 1 22 0 7 905 455 245 244 16 chr15 41998068 41998354 -61496620 - MTD LTR MaLR -16 403 67 7 905 263 320 71 44 chr15 41998603 41998786 -61496188 - L2 LINE L2 -967 2452 2265 7 905 2317 120 58 24 chr15 42000366 42000776 -61494198 + Lx LINE L1 6231 6654 0 1 905 3724 188 17 6 chr15 42000838 42001491 -61493483 - RLTR17 LTR ERVK -16 676 17 2 905 270 152 0 0 chr15 42001505 42001564 -61493410 + (CCTG)n Simple_repeat Simple_repeat 2 60 0 3 905 1006 140 0 11 chr15 42001578 42001759 -61493215 + CT-rich Low_complexity Low_complexity 1 179 0 4 905 396 307 44 150 chr15 42001761 42001914 -61493060 - RSINE1 SINE B4 0 165 28 5 905 1597 241 19 3 chr15 42001914 42002280 -61492694 + ORR1D1 LTR MaLR 3 374 0 6 905 396 307 44 150 chr15 42002280 42002306 -61492668 - RSINE1 SINE B4 -138 27 5 5 905 1113 303 54 54 chr15 42002353 42002723 -61492251 - MTEb LTR MaLR 0 379 10 7 905 2380 314 88 24 chr15 42002734 42003666 -61491308 - MTEb-int LTR MaLR -2 1578 587 7 905 871 298 56 28 chr15 42003659 42003980 -61490994 - MTEb-int LTR MaLR -1219 361 32 7 905 1027 291 67 35 chr15 42003997 42004310 -61490664 - MTEb LTR MaLR -2 377 55 7 905 8992 58 6 9 chr15 42004946 42006851 -61488123 - L1Md_F3 LINE L1 -17 6567 4669 8 905 567 358 69 11 chr15 42007787 42008061 -61486913 + B4A SINE B4 3 292 0 9 905 23027 115 68 11 chr15 42009410 42014269 -61480705 - L1_Mus2 LINE L1 0 6566 1411 1 905 5566 148 8 51 chr15 42014249 42015328 -61479646 - L1VL1 LINE L1 -5377 1045 13 1 905 1788 123 29 7 chr15 42015406 42015685 -61479289 + Lx LINE L1 6363 6647 -7 1 905 2283 80 3 3 chr15 42015689 42016002 -61478972 + L1Md_F2 LINE L1 6268 6580 -2 1 905 2253 240 90 79 chr15 42016195 42017040 -61477934 + Lx7 LINE L1 6843 7696 0 1 905 262 328 95 21 chr15 42017669 42017859 -61477115 + MIR SINE MIR 4 207 -55 1 905 25 31 0 0 chr15 42017984 42018016 -61476958 + AT_rich Low_complexity Low_complexity 1 32 0 1 905 4725 32 4 0 chr15 42018021 42018638 -61476336 - L1Md_F2 LINE L1 -414 6168 5550 1 905 2959 83 5 7 chr15 42018638 42019050 -61475924 + L1Md_F2 LINE L1 6160 6570 -12 1 905 566 281 25 84 chr15 42019063 42019265 -61475709 + B3A SINE B2 3 192 -6 1 905 509 287 117 38 chr15 42019285 42019581 -61475393 + MTEb LTR MaLR 65 369 -5 1 905 233 312 74 27 chr15 42021037 42021185 -61473789 + MER34 LTR ERV1 333 487 -55 2 905 330 26 0 0 chr15 42021341 42021380 -61473594 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 905 239 336 96 0 chr15 42021862 42022008 -61472966 - MER2 DNA MER2_type -153 192 33 2 905 441 318 30 15 chr15 42022691 42022892 -61472082 + L1M2 LINE L1 5137 5340 -803 2 905 14666 99 36 9 chr15 42022907 42025795 -61469179 + L1_Mur1 LINE L1 210 3484 -2402 2 905 6768 74 4 2 chr15 42025879 42026804 -61468170 + L1_Mus1 LINE L1 5640 6566 -1 2 905 6093 83 13 0 chr15 42026790 42027693 -61467281 + L1_Mur1 LINE L1 3440 4354 -1532 2 905 3894 25 0 0 chr15 42027688 42028162 -61466812 + L1Md_F3 LINE L1 5634 6107 -477 2 905 1460 114 192 10 chr15 42028162 42028454 -61466520 + IAPLTR4 LTR ERVK 1 345 0 2 905 1002 91 25 25 chr15 42028454 42028612 -61466362 + IAPLTR4_I LTR ERVK 19 176 -1294 2 905 654 115 0 0 chr15 42028611 42028707 -61466267 + IAPEY3-int LTR ERVK 407 502 -7178 2 905 1138 118 30 44 chr15 42028705 42029008 -61465966 + IAPLTR4_I LTR ERVK 563 952 -6629 2 905 1213 214 103 70 chr15 42029127 42029613 -61465361 + ETnERV3-int LTR ERVK 255 668 -5469 3 905 344 231 103 0 chr15 42029613 42029730 -61465244 + ETnERV3-int LTR ERVK 1721 1849 -5557 3 905 6690 101 52 7 chr15 42029833 42031219 -61463755 + ETnERV3-int LTR ERVK 2735 4271 -3135 3 905 410 205 23 4 chr15 42031226 42031345 -61463629 + IAPLTR3-int LTR ERVK 2362 2464 -2380 3 905 763 93 17 8 chr15 42031360 42031479 -61463495 + MMERVK10C-int LTR ERVK 4530 4649 -2932 3 905 2087 194 10 13 chr15 42031617 42032178 -61462796 + IAPLTR3-int LTR ERVK 5098 5745 -1076 3 905 582 276 50 60 chr15 42032470 42032751 -61462223 + IAPLTR3-int LTR ERVK 5466 5743 -799 3 905 5635 182 25 7 chr15 42033073 42034106 -61460868 + IAPLTR3-int LTR ERVK 5750 6801 -20 3 905 1422 131 188 7 chr15 42034106 42034398 -61460576 + IAPLTR4 LTR ERVK 1 345 0 3 905 3903 42 2 12 chr15 42034401 42034889 -61460085 + L1Md_F3 LINE L1 6102 6584 0 3 905 10409 82 17 9 chr15 42034889 42035296 -61459678 + Lx3A LINE L1 4336 4743 -1143 3 905 1152 55 21 0 chr15 42035296 42035441 -61459533 + B1_Mus1 SINE Alu 1 148 0 3 905 210 37 0 0 chr15 42035443 42035470 -61459504 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 905 10409 82 16 9 chr15 42035470 42036669 -61458305 + Lx3A LINE L1 4744 5951 -1030 3 905 274 124 37 29 chr15 42036712 42036812 -61458162 + L1M5 LINE L1 5345 5445 -846 3 905 29 0 0 0 chr15 42038491 42038520 -61456454 + AT_rich Low_complexity Low_complexity 1 29 0 3 905 23 0 0 0 chr15 42039427 42039450 -61455524 + AT_rich Low_complexity Low_complexity 1 23 0 3 905 796 266 58 57 chr15 42040115 42040456 -61454518 - RLTR26 LTR ERVK -225 417 47 4 905 7380 58 9 5 chr15 42040783 42042409 -61452565 - L1Md_F2 LINE L1 -3 6579 4947 4 905 1517 282 38 131 chr15 42042763 42043625 -61451349 + RMER1B Other Other 61 842 -224 4 905 2200 179 26 15 chr15 42043623 42044087 -61450887 - L1_Mur2 LINE L1 -342 5535 5067 4 905 5540 166 35 24 chr15 42044087 42044343 -61450631 + L1_Mur2 LINE L1 3986 4252 -1625 4 905 1608 219 66 72 chr15 42044343 42044873 -61450101 + RLTR11A2 LTR ERVK 1 527 0 4 905 5540 166 35 24 chr15 42044873 42045811 -61449163 + L1_Mur2 LINE L1 4253 5193 -684 4 905 587 148 57 43 chr15 42045860 42046001 -61448973 - Lx3B LINE L1 -5 6968 6826 4 905 1153 136 6 0 chr15 42046001 42046177 -61448797 + Lx3B LINE L1 6636 6812 -161 4 905 574 158 14 36 chr15 42046200 42046338 -61448636 + RMER1B Other Other 928 1062 -4 4 905 297 0 0 0 chr15 42046401 42046434 -61448540 + (TTA)n Simple_repeat Simple_repeat 2 34 0 4 905 441 0 0 0 chr15 42047056 42047105 -61447869 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 905 452 273 65 53 chr15 42047361 42047531 -61447443 + MTEb LTR MaLR 154 325 -54 5 905 294 175 0 36 chr15 42047586 42047669 -61447305 + CT-rich Low_complexity Low_complexity 3 82 0 5 905 2063 172 42 0 chr15 42047982 42048360 -61446614 + ORR1B1 LTR MaLR 1 394 0 5 905 609 241 81 86 chr15 42048980 42049189 -61445785 - B3 SINE B2 -7 209 2 5 905 287 324 18 9 chr15 42049616 42049728 -61445246 - PB1 SINE Alu -12 115 3 5 905 3099 166 29 93 chr15 42051129 42051815 -61443159 - RLTR26 LTR ERVK 0 642 1 5 905 546 116 0 0 chr15 42052430 42052448 -61442526 + (GA)n Simple_repeat Simple_repeat 2 19 0 5 905 300 27 0 0 chr15 42052448 42052485 -61442489 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 905 546 116 0 0 chr15 42052485 42052552 -61442422 + (GA)n Simple_repeat Simple_repeat 2 68 0 5 905 25 65 0 0 chr15 42052729 42052775 -61442199 + AT_rich Low_complexity Low_complexity 1 46 0 5 905 605 195 200 26 chr15 42053532 42053722 -61441252 - URR1A DNA MER1_type -3 223 1 6 905 1071 96 7 0 chr15 42053944 42054090 -61440884 + B1_Mus1 SINE Alu 2 148 0 6 905 226 111 47 16 chr15 42054090 42054154 -61440820 + A-rich Low_complexity Low_complexity 5 70 0 6 905 285 29 0 0 chr15 42054228 42054262 -61440712 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 905 347 330 138 30 chr15 42054295 42054498 -61440476 - MER45B DNA Tip100 -764 276 52 6 905 28 29 0 0 chr15 42055172 42055207 -61439767 + AT_rich Low_complexity Low_complexity 1 35 0 6 905 195 306 14 145 chr15 42055361 42055506 -61439468 + L2c LINE L2 3198 3323 -64 6 905 247 287 78 61 chr15 42056945 42057060 -61437914 + MER63B DNA AcHobo 313 429 -7 6 905 3458 69 0 9 chr15 42058427 42058879 -61436095 + L1Md_F2 LINE L1 6113 6560 -22 6 905 180 303 44 29 chr15 42058965 42059033 -61435941 - L2a LINE L2 -53 3373 3305 6 905 939 324 107 50 chr15 42059115 42060116 -61434858 - L1MD3 LINE L1 0 7995 6938 7 905 228 67 0 0 chr15 42060692 42060722 -61434252 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 7 905 340 158 131 41 chr15 42060971 42061116 -61433858 - Lx9 LINE L1 -9 7635 7478 7 905 3566 203 74 16 chr15 42061170 42062067 -61432907 - Lx9 LINE L1 -127 7517 6569 7 905 1085 75 143 0 chr15 42062362 42062523 -61432451 + B2_Mm2 SINE B2 5 188 -7 7 905 289 335 71 19 chr15 42062898 42063108 -61431866 - ID_B1 SINE B4 -2 222 2 7 905 261 119 0 0 chr15 42063887 42063929 -61431045 + (A)n Simple_repeat Simple_repeat 1 42 0 7 905 4665 133 15 16 chr15 42064393 42064774 -61430200 - Lx LINE L1 -11 6643 6274 7 905 6992 99 8 21 chr15 42064774 42065769 -61429205 + RLTR13C1 LTR ERVK 2 983 0 7 905 4665 133 15 16 chr15 42065769 42066123 -61428851 - Lx LINE L1 -381 6273 5909 7 905 1109 248 142 6 chr15 42066536 42066852 -61428122 - MTD LTR MaLR -58 361 3 7 905 360 294 45 7 chr15 42066856 42067010 -61427964 - MTD-int LTR MaLR -2 1256 1097 7 905 312 27 0 0 chr15 42067145 42067182 -61427792 + (TATG)n Simple_repeat Simple_repeat 4 40 0 8 905 456 319 5 36 chr15 42067265 42067457 -61427517 - Lx9 LINE L1 -229 7415 7230 8 905 369 260 19 28 chr15 42068323 42068430 -61426544 + Lx7 LINE L1 7175 7280 -416 8 905 235 246 0 76 chr15 42068452 42068584 -61426390 + T-rich Low_complexity Low_complexity 3 124 0 8 905 23 33 0 0 chr15 42068674 42068704 -61426270 + AT_rich Low_complexity Low_complexity 1 30 0 8 905 238 294 80 86 chr15 42070587 42070762 -61424212 - L3 LINE CR1 -97 4392 4219 8 905 1155 251 39 42 chr15 42071632 42072015 -61422959 + Lx9 LINE L1 7094 7475 -169 8 905 324 0 0 0 chr15 42072016 42072052 -61422922 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 905 29 0 0 0 chr15 42072125 42072154 -61422820 + AT_rich Low_complexity Low_complexity 1 29 0 8 905 279 295 26 0 chr15 42072355 42072433 -61422541 - ID4_ SINE ID 0 83 4 8 905 23 0 0 0 chr15 42072475 42072498 -61422476 + AT_rich Low_complexity Low_complexity 1 23 0 9 905 2269 256 80 0 chr15 42073400 42073939 -61421035 - Lx5 LINE L1 -3 7047 6466 9 906 276 299 91 20 chr15 42074147 42074246 -61420728 + PB1D7 SINE Alu 10 115 -5 9 906 10080 166 21 24 chr15 42074248 42076160 -61418814 - L1_Mur2 LINE L1 -434 5443 3537 9 906 7096 127 14 8 chr15 42076159 42077335 -61417639 + Lx LINE L1 5460 6646 -8 9 906 1405 308 56 70 chr15 42077365 42078594 -61416380 + Lx8 LINE L1 4424 5635 -245 9 906 302 255 6 25 chr15 42078597 42078758 -61416216 + (TATATG)n Simple_repeat Simple_repeat 1 158 0 9 906 1114 334 130 36 chr15 42078759 42079714 -61415260 + Lx8 LINE L1 5647 6691 -782 9 906 236 169 95 16 chr15 42080096 42080222 -61414752 + (TA)n Simple_repeat Simple_repeat 2 137 0 9 906 213 182 65 0 chr15 42080505 42080582 -61414392 + (TA)n Simple_repeat Simple_repeat 2 83 0 9 906 381 102 0 0 chr15 42081109 42081168 -61413806 + (CA)n Simple_repeat Simple_repeat 2 60 0 9 906 216 255 0 0 chr15 42082620 42082667 -61412307 + CT-rich Low_complexity Low_complexity 2 48 0 1 906 528 59 0 0 chr15 42084246 42084314 -61410660 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 906 2054 146 19 47 chr15 42086381 42086886 -61408088 + Lx LINE L1 6203 6971 -29 1 906 288 0 0 0 chr15 42086970 42087002 -61407972 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 906 2409 162 60 17 chr15 42087195 42087610 -61407364 - Lx5 LINE L1 -141 6909 6477 1 906 1037 209 97 9 chr15 42088324 42088551 -61406423 + Lx5 LINE L1 6803 7049 -1 1 906 1810 97 22 4 chr15 42088604 42088874 -61406100 - L1_Mus3 LINE L1 0 6638 6364 1 906 3126 148 119 24 chr15 42088882 42089798 -61405176 + RLTR13D1 LTR ERVK 10 1023 0 1 906 2456 119 36 0 chr15 42089798 42090184 -61404790 - L1_Mus3 LINE L1 -270 6368 5969 1 906 7367 101 16 14 chr15 42090176 42092156 -61402818 - L1VL1 LINE L1 -1531 2167 194 1 906 290 344 17 101 chr15 42092217 42092395 -61402579 - B4A SINE B4 -106 186 24 1 906 284 0 0 27 chr15 42093067 42093104 -61401870 + (TC)n Simple_repeat Simple_repeat 2 37 0 1 906 342 45 0 0 chr15 42093106 42093150 -61401824 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 906 212 347 48 58 chr15 42093271 42093375 -61401599 - B1_Mm SINE Alu -44 103 1 1 906 5592 137 40 13 chr15 42093482 42094405 -61400569 - Lx LINE L1 -1 6653 5706 1 906 5614 159 4 2 chr15 42094407 42095356 -61399618 + Lx LINE L1 4754 5704 -179 1 906 436 343 95 55 chr15 42095881 42096085 -61398889 - L1MEd LINE L1 -5053 1066 866 1 906 1317 119 0 5 chr15 42096085 42096279 -61398695 - B2_Mm2 SINE B2 0 195 3 1 906 436 343 95 55 chr15 42096279 42096528 -61398446 - L1MEd LINE L1 -5254 865 595 1 906 492 18 0 0 chr15 42096694 42096751 -61398223 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 1 906 1065 97 0 0 chr15 42096751 42096895 -61398079 - B1_Mus2 SINE Alu -3 144 1 1 906 625 251 34 83 chr15 42097374 42097426 -61397548 - MTE2a LTR MaLR -10 369 320 1 906 2514 108 20 23 chr15 42097426 42097823 -61397151 - MTA_Mm LTR MaLR 0 396 1 1 906 625 257 39 82 chr15 42097823 42098020 -61396954 - MTE2a LTR MaLR -60 319 125 1 906 300 319 210 22 chr15 42098520 42098834 -61396140 + L2a LINE L2 3044 3416 -10 1 906 27175 143 29 11 chr15 42099373 42102333 -61392641 + L1_Mus3 LINE L1 439 3476 -2407 1 906 270 0 0 0 chr15 42102333 42102363 -61392611 + (CAA)n Simple_repeat Simple_repeat 1 30 0 1 906 27175 142 17 3 chr15 42102363 42103500 -61391474 + L1_Mus3 LINE L1 3477 4626 -1257 1 906 198 71 0 0 chr15 42103500 42103528 -61391446 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 1 906 27175 110 13 2 chr15 42103528 42105519 -61389455 + L1_Mus3 LINE L1 4627 6624 -14 1 906 195 114 0 0 chr15 42105747 42105782 -61389192 + (T)n Simple_repeat Simple_repeat 1 35 0 1 906 396 0 0 0 chr15 42107527 42107571 -61387403 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 906 28 29 0 0 chr15 42108029 42108064 -61386910 + AT_rich Low_complexity Low_complexity 1 35 0 1 906 2679 174 125 15 chr15 42108071 42108169 -61386805 + RMER6C LTR ERVK 23 118 -572 1 906 2160 72 0 4 chr15 42108169 42108450 -61386524 - L1_Mus2 LINE L1 0 6566 6287 1 906 2679 174 125 15 chr15 42108450 42108646 -61386328 + RMER6C LTR ERVK 119 330 -360 1 906 387 0 0 0 chr15 42108646 42108689 -61386285 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 906 2679 174 125 15 chr15 42108689 42108995 -61385979 + RMER6C LTR ERVK 331 688 -2 1 906 533 224 75 14 chr15 42108997 42109176 -61385798 - L1MA4 LINE L1 -392 5908 5688 1 906 614 330 44 0 chr15 42109943 42110146 -61384828 + B3 SINE B2 5 216 0 1 906 279 314 66 25 chr15 42111653 42111849 -61383125 - L2a LINE L2 -11 3415 3212 1 906 746 277 31 5 chr15 42113228 42113424 -61381550 + ID_B1 SINE B4 8 208 -16 1 906 202 116 0 65 chr15 42114436 42114482 -61380492 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 1 906 9131 156 153 27 chr15 42114638 42117937 -61377037 - Lx LINE L1 -9 6645 2892 1 906 654 13 0 0 chr15 42117937 42118012 -61376962 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 1 906 1006 74 20 0 chr15 42118014 42118162 -61376812 + (TCCC)n Simple_repeat Simple_repeat 3 153 0 1 906 9131 176 187 36 chr15 42118162 42118173 -61376801 - Lx LINE L1 -2995 2891 2881 1 906 10525 122 24 66 chr15 42118191 42119395 -61375579 - Lx3_Mus LINE L1 -55 6954 5754 1 906 5034 42 0 0 chr15 42119395 42119995 -61374979 - L1Md_T LINE L1 0 6582 5983 1 906 10525 106 22 45 chr15 42119995 42121651 -61373323 - Lx3_Mus LINE L1 -130 5756 4130 1 906 3119 141 73 24 chr15 42121645 42122488 -61372486 - L1VL4 LINE L1 -2483 1076 185 1 906 826 279 30 4 chr15 42123672 42123902 -61371072 + Lx6 LINE L1 7217 7452 -8 1 906 340 104 0 0 chr15 42124978 42125026 -61369948 - U2 snRNA snRNA -136 52 5 1 906 6539 168 25 12 chr15 42125033 42126210 -61368764 + Lx2B LINE L1 5808 6999 -1 1 906 349 377 50 18 chr15 42126782 42127001 -61367973 + RMER15 LTR ERVL 347 572 -3 1 906 244 143 89 130 chr15 42129352 42129521 -61365453 + RMER17C LTR ERVK 99 260 -150 1 906 912 44 0 0 chr15 42129522 42129635 -61365339 + (CTATT)n Simple_repeat Simple_repeat 5 117 0 1 906 894 327 45 45 chr15 42129672 42130047 -61364927 + MTD LTR MaLR 1 375 -44 1 906 764 127 24 0 chr15 42130035 42130161 -61364813 - URR1A DNA MER1_type -17 209 81 1 906 391 185 151 11 chr15 42130706 42130799 -61364175 + MTE2b LTR MaLR 1 106 -273 1 906 855 251 162 30 chr15 42131157 42131453 -61363521 + MTE2b LTR MaLR 45 379 0 1 906 472 33 0 0 chr15 42132409 42132469 -61362505 - L1_Mus4 LINE L1 -890 5746 5687 1 906 3355 73 16 5 chr15 42132469 42132909 -61362065 + L1_Mus1 LINE L1 6123 6567 0 1 906 612 273 20 50 chr15 42132910 42133103 -61361871 - B3 SINE B2 -28 188 2 1 906 2195 146 37 32 chr15 42134873 42135277 -61359697 + Lx2B LINE L1 6591 6996 -4 1 906 199 350 62 0 chr15 42135642 42135722 -61359252 + L2a LINE L2 3335 3419 -7 1 906 805 227 72 58 chr15 42135832 42136365 -61358609 + RMER17B LTR ERVK 236 824 -84 1 906 543 56 0 0 chr15 42136410 42136481 -61358493 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 906 7026 76 11 11 chr15 42136835 42138268 -61356706 - L1_Mus1 LINE L1 0 6567 5133 1 906 1760 117 10 0 chr15 42138267 42138565 -61356409 + L1_Mm LINE L1 1922 2222 -3661 1 906 588 263 73 63 chr15 42138565 42138787 -61356187 + MTD LTR MaLR 197 389 -30 1 906 25 0 0 0 chr15 42138974 42138999 -61355975 + AT_rich Low_complexity Low_complexity 1 25 0 1 906 260 243 28 14 chr15 42139061 42139132 -61355842 + LTR41 LTR ERVL 21 92 -676 1 906 366 23 0 0 chr15 42139390 42139433 -61355541 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 906 1087 93 0 0 chr15 42139437 42139576 -61355398 - B1_Mus2 SINE Alu -8 139 1 1 906 265 0 0 0 chr15 42140242 42140281 -61354693 - L1Md_F3 LINE L1 -14 6570 6532 1 906 1162 69 0 0 chr15 42140381 42140525 -61354449 + B1_Mus2 SINE Alu 3 146 -1 1 906 444 283 136 5 chr15 42140899 42141105 -61353869 - Tigger8 DNA MER2_type -198 468 236 1 906 21 0 0 0 chr15 42141642 42141663 -61353311 + AT_rich Low_complexity Low_complexity 1 21 0 1 906 374 415 67 37 chr15 42141936 42142234 -61352740 + LTR88a LTR Gypsy 242 548 -268 1 906 213 405 35 66 chr15 42142420 42142618 -61352356 - MIRb SINE MIR -70 198 7 1 906 460 197 0 33 chr15 42143753 42143874 -61351100 + (TATG)n Simple_repeat Simple_repeat 2 118 0 1 906 31775 77 5 8 chr15 42144473 42149660 -61345314 + L1Md_F2 LINE L1 411 5586 -297 1 906 7771 64 4 2 chr15 42149661 42150647 -61344327 + L1Md_F2 LINE L1 5588 6575 -7 1 906 272 306 28 0 chr15 42150997 42151069 -61343905 - ID4 SINE ID 0 83 10 1 906 5298 179 58 35 chr15 42152425 42153295 -61341679 + Lx4B LINE L1 5813 6677 -381 1 906 342 0 0 0 chr15 42153295 42153333 -61341641 + (CTAA)n Simple_repeat Simple_repeat 3 40 0 1 906 5298 179 58 35 chr15 42153333 42153675 -61341299 + Lx4B LINE L1 6678 7052 -6 1 906 624 157 196 10 chr15 42154044 42154243 -61340731 - Lx9 LINE L1 -8 7636 7401 1 906 840 277 47 12 chr15 42154278 42154577 -61340397 - Lx9 LINE L1 -1700 5944 5640 1 906 260 308 0 15 chr15 42154970 42155036 -61339938 + ID_B1 SINE B4 148 212 -12 1 906 28 29 0 0 chr15 42155125 42155160 -61339814 + AT_rich Low_complexity Low_complexity 1 35 0 1 906 582 15 0 0 chr15 42155204 42155271 -61339703 + (TC)n Simple_repeat Simple_repeat 2 68 0 1 906 981 81 0 51 chr15 42155723 42155864 -61339110 + B1_Mus1 SINE Alu 1 136 -12 1 906 387 0 0 0 chr15 42155864 42155907 -61339067 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 1 906 981 81 0 51 chr15 42155907 42155921 -61339053 + B1_Mus1 SINE Alu 137 148 0 1 906 21 0 0 0 chr15 42156649 42156670 -61338304 + AT_rich Low_complexity Low_complexity 1 21 0 1 906 305 273 42 0 chr15 42157737 42157833 -61337141 + MTEb LTR MaLR 277 379 0 1 906 223 214 78 0 chr15 42159582 42159685 -61335289 + (TA)n Simple_repeat Simple_repeat 1 111 0 1 906 878 211 43 24 chr15 42159685 42159894 -61335080 - B3 SINE B2 0 216 4 1 906 715 31 10 10 chr15 42161814 42161913 -61333061 + (CA)n Simple_repeat Simple_repeat 1 99 0 1 906 254 329 0 0 chr15 42164259 42164332 -61330642 + CT-rich Low_complexity Low_complexity 6 78 0 1 906 1616 165 111 40 chr15 42164403 42164756 -61330218 - ORR1C1 LTR MaLR 0 378 1 1 906 341 362 26 13 chr15 42164758 42164909 -61330065 - RSINE1 SINE B4 -3 162 10 1 906 270 0 0 0 chr15 42166402 42166432 -61328542 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 906 2629 126 37 19 chr15 42166432 42166862 -61328112 - BGLII_B LTR ERVK -3 438 1 1 906 214 204 19 0 chr15 42166862 42166916 -61328058 + T-rich Low_complexity Low_complexity 2 56 0 1 906 315 0 0 0 chr15 42167299 42167334 -61327640 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 906 897 84 130 0 chr15 42167358 42167489 -61327485 + B1_Mus1 SINE Alu 1 148 0 1 906 663 323 100 27 chr15 42168138 42168399 -61326575 + B4A SINE B4 13 292 0 1 906 384 368 9 0 chr15 42168505 42168611 -61326363 + RSINE1 SINE B4 2 108 -57 1 906 899 265 128 89 chr15 42168664 42168998 -61325976 - L1_Mur3 LINE L1 -275 5605 5245 1 906 268 105 0 0 chr15 42168998 42169036 -61325938 - U2 snRNA snRNA -149 39 2 2 906 899 265 128 89 chr15 42169036 42169067 -61325907 - L1_Mur3 LINE L1 -275 5244 5210 1 906 724 74 0 18 chr15 42169067 42169177 -61325797 + (TA)n Simple_repeat Simple_repeat 2 109 0 2 906 899 272 122 81 chr15 42169177 42169519 -61325455 - L1_Mur3 LINE L1 -671 5209 4844 1 906 601 114 26 18 chr15 42169645 42169758 -61325216 + ORR1B1 LTR MaLR 1 138 -256 2 906 1335 285 50 24 chr15 42169823 42170279 -61324695 + Lx8 LINE L1 6102 6569 -904 2 906 632 332 127 74 chr15 42170284 42170889 -61324085 - RLTR26 LTR ERVK -2 640 4 2 906 1033 337 89 31 chr15 42170920 42171493 -61323481 + Lx8 LINE L1 6599 7204 -269 2 906 1623 184 36 168 chr15 42171567 42172062 -61322912 - RLTR23 LTR ERV1 0 430 1 2 906 1604 288 117 21 chr15 42172077 42172904 -61322070 - Lx9 LINE L1 -42 7602 6696 2 906 1247 308 9 40 chr15 42172893 42173319 -61321655 - Lx7 LINE L1 -973 6723 6311 2 906 1428 335 69 37 chr15 42173429 42174124 -61320850 - Lx8 LINE L1 -233 7240 6506 2 906 7314 80 24 70 chr15 42174124 42175273 -61319701 + MTA_Mm-int LTR MaLR 3 1098 0 2 906 3083 58 2 10 chr15 42175273 42175672 -61319302 + MTA_Mm LTR MaLR 1 396 0 2 906 1428 335 69 37 chr15 42175672 42175786 -61319188 - Lx8 LINE L1 -968 6505 6405 2 906 346 217 83 12 chr15 42175805 42175889 -61319085 + MTEa LTR MaLR 3 92 -287 2 906 259 260 57 58 chr15 42175913 42176016 -61318958 + MTEa LTR MaLR 269 379 0 2 906 2446 234 167 29 chr15 42176066 42176432 -61318542 - Lx6 LINE L1 -169 7291 6896 2 906 309 26 0 0 chr15 42176432 42176470 -61318504 + (TC)n Simple_repeat Simple_repeat 2 39 0 2 906 2446 234 167 29 chr15 42176470 42176832 -61318142 - Lx6 LINE L1 -565 6895 6462 2 906 906 170 131 6 chr15 42176833 42177016 -61317958 + URR1A DNA MER1_type 2 207 -19 2 906 3160 220 92 29 chr15 42177028 42178177 -61316797 - Lx6 LINE L1 -992 6468 5245 2 906 23323 139 32 9 chr15 42178169 42180443 -61314531 - Lx4A LINE L1 0 7058 4731 2 906 988 86 20 0 chr15 42180443 42180595 -61314379 + (TTTC)n Simple_repeat Simple_repeat 2 156 0 2 906 23323 131 27 8 chr15 42180595 42183235 -61311739 - Lx4A LINE L1 -1147 4730 2052 2 906 327 25 0 0 chr15 42183235 42183275 -61311699 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 906 23323 131 27 8 chr15 42183275 42183402 -61311572 - Lx4A LINE L1 -3826 2051 1925 2 906 1334 153 36 4 chr15 42183402 42183651 -61311323 - Lx4A LINE L1 -6405 681 425 2 906 1287 222 67 12 chr15 42183651 42183711 -61311263 - L1_Mur3 LINE L1 -582 5298 5239 2 906 191 36 36 0 chr15 42183711 42183739 -61311235 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 906 1287 222 67 12 chr15 42183739 42184020 -61310954 - L1_Mur3 LINE L1 -642 5238 4938 2 906 270 0 0 0 chr15 42184020 42184050 -61310924 + (TAGA)n Simple_repeat Simple_repeat 3 32 0 2 906 5514 168 114 12 chr15 42184055 42184443 -61310531 + L1_Mur3 LINE L1 3226 3651 -2229 2 906 438 20 0 0 chr15 42184443 42184494 -61310480 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 906 5514 168 114 12 chr15 42184494 42184965 -61310009 + L1_Mur3 LINE L1 3652 4181 -1699 2 906 589 76 11 11 chr15 42184965 42185058 -61309916 + (TA)n Simple_repeat Simple_repeat 2 94 0 2 906 5514 168 114 12 chr15 42185058 42185427 -61309547 + L1_Mur3 LINE L1 4182 4579 -1301 2 906 198 277 121 0 chr15 42185543 42185626 -61309348 - MIRc SINE MIR -123 145 53 2 906 23 33 0 0 chr15 42185905 42185935 -61309039 + AT_rich Low_complexity Low_complexity 1 30 0 2 906 39390 27 2 6 chr15 42186414 42192644 -61302330 - L1Md_A LINE L1 0 6582 385 2 906 748 217 42 0 chr15 42193565 42193731 -61301243 + MER5B DNA MER1_type 6 178 0 2 906 1574 135 55 0 chr15 42193779 42194053 -61300921 - Lx2 LINE L1 0 6997 6709 2 906 201 363 62 62 chr15 42194267 42194411 -61300563 - MIR3 SINE MIR -55 153 10 2 906 1831 148 74 57 chr15 42194770 42195122 -61299852 + ORR1C1 LTR MaLR 21 378 0 2 906 430 238 14 93 chr15 42195909 42196048 -61298926 + B3 SINE B2 75 202 -14 2 906 556 133 142 9 chr15 42196092 42196198 -61298776 - B3 SINE B2 -95 121 2 2 906 743 116 8 0 chr15 42197520 42197641 -61297333 + (TTTC)n Simple_repeat Simple_repeat 3 124 0 2 906 198 103 0 0 chr15 42197658 42197687 -61297287 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2 906 432 0 0 0 chr15 42198025 42198073 -61296901 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 906 245 210 62 46 chr15 42200235 42200300 -61294674 + ORR1B1-int LTR MaLR 846 911 -598 2 906 516 32 0 0 chr15 42202963 42203025 -61291949 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 2 906 2056 180 66 6 chr15 42203025 42203535 -61291439 - Lx4B LINE L1 -21 7037 6438 2 906 22 0 0 0 chr15 42203707 42203729 -61291245 + AT_rich Low_complexity Low_complexity 1 22 0 2 907 250 180 0 39 chr15 42205220 42205272 -61289702 - MT2B2 LTR ERVL 0 584 535 2 907 438 67 0 0 chr15 42205272 42205323 -61289651 + (TC)n Simple_repeat Simple_repeat 1 51 0 2 907 1185 19 19 0 chr15 42205323 42205479 -61289495 + (TCTA)n Simple_repeat Simple_repeat 2 160 0 2 907 438 67 0 0 chr15 42205479 42205487 -61289487 + (TC)n Simple_repeat Simple_repeat 1 8 0 2 907 524 217 106 16 chr15 42205924 42206115 -61288859 + Lx4B LINE L1 6748 7058 0 2 907 293 282 16 29 chr15 42206712 42206811 -61288163 + MLT1A1 LTR MaLR 294 396 -12 2 907 338 301 59 18 chr15 42206840 42207009 -61287965 - L1M4 LINE L1 -1923 4223 4048 2 907 287 378 84 5 chr15 42207075 42207277 -61287697 + MER77 LTR ERVL 389 606 -1 2 907 258 289 54 32 chr15 42209320 42209413 -61285561 - MIRb SINE MIR -58 210 116 2 907 521 305 7 0 chr15 42209964 42210105 -61284869 - ID_B1 SINE B4 0 224 83 2 907 422 328 92 50 chr15 42211386 42211668 -61283306 + MER58B DNA MER1_type 48 341 0 2 907 28 71 0 0 chr15 42211861 42211917 -61283057 + AT_rich Low_complexity Low_complexity 1 56 0 2 907 213 39 0 0 chr15 42212390 42212416 -61282558 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 907 247 233 0 32 chr15 42212477 42212539 -61282435 + MLT2E LTR ERVL 39 98 -530 2 907 252 340 119 26 chr15 42212671 42212822 -61282152 + MLT2F LTR ERVL 326 490 -173 2 907 258 329 71 47 chr15 42213102 42213271 -61281703 - MIR SINE MIR -76 186 14 2 907 1116 49 14 7 chr15 42213875 42214020 -61280954 - B1_Mm SINE Alu 0 147 2 2 907 1385 246 53 12 chr15 42214053 42214390 -61280584 - Lx7 LINE L1 -1003 6693 6343 2 907 474 18 0 0 chr15 42214937 42214992 -61279982 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 907 387 319 14 21 chr15 42215882 42216026 -61278948 + B1F SINE Alu 5 147 -2 2 907 680 310 17 6 chr15 42217513 42217685 -61277289 + B3A SINE B2 1 174 -24 2 907 4100 233 43 36 chr15 42218971 42221155 -61273819 - Lx5 LINE L1 -2 7458 4980 2 907 353 164 0 0 chr15 42221156 42221223 -61273751 + Lx5 LINE L1 4918 4984 -893 2 907 763 88 0 17 chr15 42221401 42221543 -61273431 - L1Md_F2 LINE L1 0 6582 6446 2 907 1185 61 0 7 chr15 42221881 42222029 -61272945 + B1_Mus2 SINE Alu 1 147 0 2 907 185 0 40 0 chr15 42222029 42222054 -61272920 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 907 381 22 0 0 chr15 42222416 42222462 -61272512 + (TC)n Simple_repeat Simple_repeat 2 47 0 2 907 315 0 0 0 chr15 42222462 42222496 -61272478 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 907 463 314 44 22 chr15 42223978 42224115 -61270859 - MTEa LTR MaLR -8 371 224 2 907 344 186 0 9 chr15 42224167 42224281 -61270693 + CT-rich Low_complexity Low_complexity 2 114 0 2 907 448 247 79 35 chr15 42224283 42224446 -61270528 - MTEa LTR MaLR -196 183 1 2 907 1635 227 23 50 chr15 42224447 42224888 -61270086 + RMER1C Other Other 913 1341 -1 2 907 472 129 33 20 chr15 42225060 42225210 -61269764 + (TAGA)n Simple_repeat Simple_repeat 3 154 0 2 907 1939 76 149 0 chr15 42225422 42225710 -61269264 - L1_Mus1 LINE L1 0 6567 6237 2 907 4580 56 2 0 chr15 42225710 42226280 -61268694 - L1Md_F2 LINE L1 0 6582 6012 2 907 872 65 0 0 chr15 42226280 42226388 -61268586 - L1_Mus1 LINE L1 -326 6241 6134 2 907 271 47 0 0 chr15 42226389 42226432 -61268542 + L1_Mus1 LINE L1 5911 5953 -614 2 907 414 179 0 0 chr15 42226753 42226848 -61268126 + (CA)n Simple_repeat Simple_repeat 2 96 0 2 907 468 136 0 0 chr15 42226847 42226935 -61268039 + (GA)n Simple_repeat Simple_repeat 2 89 0 2 907 233 324 0 26 chr15 42226972 42227086 -61267888 + CT-rich Low_complexity Low_complexity 1 111 0 2 907 189 0 0 0 chr15 42227893 42227914 -61267060 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 2 907 3722 153 47 26 chr15 42228024 42228688 -61266286 - RLTR33 LTR ERVK 0 678 1 2 907 24 0 0 0 chr15 42229049 42229073 -61265901 + AT_rich Low_complexity Low_complexity 1 24 0 2 907 22 35 0 0 chr15 42230060 42230089 -61264885 + AT_rich Low_complexity Low_complexity 1 29 0 2 907 927 136 0 7 chr15 42230460 42230608 -61264366 + B1_Mus1 SINE Alu 1 147 -1 2 907 34 0 0 0 chr15 42230615 42230649 -61264325 + AT_rich Low_complexity Low_complexity 1 34 0 2 907 244 294 171 0 chr15 42230851 42230997 -61263977 - MIRb SINE MIR -71 197 27 2 907 279 254 16 0 chr15 42231192 42231255 -61263719 + RSINE1 SINE B4 82 145 -20 2 907 1605 190 81 18 chr15 42231778 42232174 -61262800 + RLTR19-int LTR ERVK 1429 1849 -4288 2 907 13108 46 2 1 chr15 42232174 42233802 -61261172 + L1Md_F2 LINE L1 3955 5585 -298 2 907 8041 48 2 2 chr15 42233803 42234797 -61260177 + L1Md_F2 LINE L1 5587 6580 -2 2 907 469 228 20 52 chr15 42234799 42234925 -61260049 + RLTR19-int LTR ERVK 1854 1976 -4161 2 907 204 40 0 0 chr15 42234925 42234950 -61260024 + (TTAGGG)n Simple_repeat Simple_repeat 2 26 0 2 907 469 228 20 52 chr15 42234950 42234976 -61259998 + RLTR19-int LTR ERVK 1977 2000 -4137 2 907 227 258 65 43 chr15 42235244 42235337 -61259637 - L1MA8 LINE L1 -41 6250 6156 2 907 462 213 27 17 chr15 42235380 42235511 -61259463 - L1MA8 LINE L1 -147 6165 6043 2 907 4318 200 14 9 chr15 42235932 42236844 -61258130 + Lx2B LINE L1 6071 6987 -13 2 907 198 229 136 76 chr15 42236969 42237087 -61257887 + L2 LINE L2 2766 2890 -529 2 907 180 0 0 0 chr15 42237378 42237398 -61257576 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 907 2998 71 8 2 chr15 42237902 42238300 -61256674 + MTB LTR MaLR 1 400 0 2 907 250 357 0 0 chr15 42238597 42238667 -61256307 - B4A SINE B4 -4 288 219 2 907 399 344 62 6 chr15 42238692 42238853 -61256121 - B4 SINE B4 -116 176 7 2 907 597 295 74 102 chr15 42238977 42239381 -61255593 - RMER10A LTR ERVL -38 404 12 2 907 209 209 0 0 chr15 42241514 42241557 -61253417 + (CATAT)n Simple_repeat Simple_repeat 3 45 0 2 907 315 0 0 0 chr15 42243258 42243293 -61251681 + (TC)n Simple_repeat Simple_repeat 2 36 0 2 907 5655 59 36 3 chr15 42243298 42244027 -61250947 - L1Md_F2 LINE L1 -19 6563 5811 2 907 1812 70 4 0 chr15 42244027 42244271 -61250703 + L1_Mm LINE L1 5161 5405 -478 2 907 675 67 0 0 chr15 42244830 42244919 -61250055 + (GAGAA)n Simple_repeat Simple_repeat 4 92 0 2 907 546 16 0 0 chr15 42244928 42244991 -61249983 + (TCCC)n Simple_repeat Simple_repeat 3 65 0 2 907 339 294 9 18 chr15 42246199 42246310 -61248664 + C-rich Low_complexity Low_complexity 3 112 0 3 907 263 298 12 12 chr15 42246453 42246538 -61248436 + CT-rich Low_complexity Low_complexity 4 88 0 3 907 227 234 43 72 chr15 42246538 42246607 -61248367 - ID4_ SINE ID -11 72 6 3 907 272 296 105 35 chr15 42246788 42247016 -61247958 - MER33 DNA MER1_type -40 284 41 3 907 528 282 70 6 chr15 42247306 42247477 -61247497 + MLT1E3 LTR MaLR 331 512 -112 3 907 483 63 0 0 chr15 42248663 42248726 -61246248 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 3 907 496 103 13 0 chr15 42249721 42249799 -61245175 - ORR1D1 LTR MaLR 0 384 306 3 907 524 246 0 34 chr15 42249798 42249916 -61245058 - ORR1D1 LTR MaLR -254 120 7 3 907 4920 274 85 101 chr15 42250059 42250905 -61244069 + Tigger1 DNA MER2_type 127 862 -1556 3 907 1104 53 7 0 chr15 42250905 42251055 -61243919 - L1_Mus2 LINE L1 0 6566 6416 3 907 4920 274 85 101 chr15 42251055 42252537 -61242437 + Tigger1 DNA MER2_type 863 2418 0 3 907 268 385 59 62 chr15 42252766 42253054 -61241920 - B4 SINE B4 0 292 6 3 907 311 0 0 25 chr15 42253247 42253287 -61241687 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 907 1070 44 0 7 chr15 42253288 42253424 -61241550 - B1_Mus1 SINE Alu -12 136 2 3 907 1106 87 56 34 chr15 42253822 42254001 -61240973 - B2_Mm2 SINE B2 -5 190 8 3 907 447 363 42 98 chr15 42254317 42254604 -61240370 + B4 SINE B4 2 272 -20 3 907 238 268 28 14 chr15 42254720 42254792 -61240182 + B1F1 SINE Alu 63 135 -14 3 907 285 29 0 0 chr15 42254795 42254829 -61240145 + (TAA)n Simple_repeat Simple_repeat 3 36 0 3 907 378 0 0 0 chr15 42254969 42255011 -61239963 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 907 437 245 0 9 chr15 42255026 42255133 -61239841 + Lx7 LINE L1 7590 7695 -1 3 907 262 352 30 104 chr15 42255318 42255578 -61239396 - MLT1H LTR MaLR -3 546 262 3 907 767 67 9 0 chr15 42256037 42256142 -61238832 - B1_Mus2 SINE Alu 0 147 42 3 907 259 293 75 95 chr15 42256039 42256094 -61238880 - B4A SINE B4 -68 224 136 3 907 281 152 50 17 chr15 42256094 42256154 -61238820 - 4.5SRNA scRNA scRNA -8 86 25 3 907 259 293 75 95 chr15 42256154 42256186 -61238788 - B4A SINE B4 -68 135 81 3 907 222 62 0 0 chr15 42256578 42256610 -61238364 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 907 200 371 14 0 chr15 42260672 42260742 -61234232 - L2b LINE L2 -64 3311 3241 3 907 748 269 55 52 chr15 42262818 42263108 -61231866 + B4A SINE B4 1 291 -1 3 907 706 320 64 13 chr15 42263277 42263575 -61231399 + MER121 Unknown Unknown 62 374 -38 3 907 368 20 0 20 chr15 42264002 42264052 -61230922 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 907 209 333 44 81 chr15 42264265 42264425 -61230549 + MIR3 SINE MIR 16 169 -39 3 907 348 24 0 0 chr15 42264953 42264994 -61229980 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 3 907 23 68 0 0 chr15 42266454 42266498 -61228476 + AT_rich Low_complexity Low_complexity 1 44 0 3 907 1756 93 27 4 chr15 42268476 42268734 -61226240 + L1_Mus3 LINE L1 6360 6623 -15 3 907 228 35 0 0 chr15 42268739 42268768 -61226206 + (GA)n Simple_repeat Simple_repeat 1 29 0 3 907 497 294 16 132 chr15 42269118 42269361 -61225613 - MER113 DNA MER1_type -258 263 49 3 907 701 268 9 49 chr15 42271717 42271941 -61223033 - B3 SINE B2 0 216 2 3 907 360 283 80 77 chr15 42272696 42272983 -61221991 + B4 SINE B4 5 292 0 3 907 24 0 0 0 chr15 42273013 42273037 -61221937 + AT_rich Low_complexity Low_complexity 1 24 0 3 907 1073 79 7 0 chr15 42273649 42273789 -61221185 + B1_Mus2 SINE Alu 2 142 -5 3 907 243 0 0 0 chr15 42273814 42273841 -61221133 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 907 510 31 0 0 chr15 42274370 42274434 -61220540 + (TC)n Simple_repeat Simple_repeat 2 65 0 3 907 1400 211 124 14 chr15 42275183 42275306 -61219668 - Lx9 LINE L1 0 7644 7520 3 907 477 0 0 0 chr15 42275306 42275359 -61219615 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 907 1400 232 157 7 chr15 42275359 42275854 -61219120 - Lx9 LINE L1 -125 7519 6940 3 907 1415 231 48 27 chr15 42275853 42276266 -61218708 + Lx9 LINE L1 5162 5583 -264 3 907 3324 56 0 5 chr15 42276291 42276721 -61218253 - L1Md_F2 LINE L1 -5 6577 6150 3 907 1925 47 0 0 chr15 42276721 42276954 -61218020 + L1Md_F2 LINE L1 5898 6130 -452 3 907 774 215 70 22 chr15 42276970 42277198 -61217776 + Lx9 LINE L1 5737 5975 -1669 3 907 515 296 160 42 chr15 42277264 42277410 -61217564 + Lx9 LINE L1 6143 6319 -1325 3 907 270 0 0 0 chr15 42277410 42277440 -61217534 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 907 515 296 160 42 chr15 42277440 42277624 -61217350 + Lx9 LINE L1 6320 6512 -1132 3 907 1951 221 16 0 chr15 42277643 42278028 -61216946 + Lx9 LINE L1 6569 6959 -685 3 907 198 0 0 0 chr15 42280220 42280242 -61214732 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 907 1033 293 30 13 chr15 42281840 42282144 -61212830 + Lx8 LINE L1 6639 6947 -526 3 907 281 310 89 10 chr15 42282552 42282653 -61212321 + PB1D10 SINE Alu 1 109 -8 3 907 310 381 8 0 chr15 42282997 42283115 -61211859 - MIR SINE MIR -58 150 32 3 907 330 26 0 0 chr15 42283615 42283654 -61211320 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 907 31 58 0 0 chr15 42284089 42284141 -61210833 + AT_rich Low_complexity Low_complexity 1 52 0 3 907 547 214 20 0 chr15 42284256 42284354 -61210620 - B3 SINE B2 -116 100 1 3 907 864 239 15 5 chr15 42284972 42285178 -61209796 + B3 SINE B2 4 211 -5 3 907 212 319 26 98 chr15 42285276 42285429 -61209545 + ID_B1 SINE B4 83 224 0 3 907 521 373 34 34 chr15 42286528 42286764 -61208210 - LTR16A LTR ERVL -213 238 3 3 907 382 298 29 67 chr15 42287496 42287701 -61207273 + Lx9 LINE L1 7316 7521 -123 3 907 369 0 0 0 chr15 42287701 42287742 -61207232 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 907 382 298 29 67 chr15 42287742 42287849 -61207125 + Lx9 LINE L1 7522 7616 -28 3 907 869 321 47 63 chr15 42288325 42288417 -61206557 - ORR1E LTR MaLR 0 359 271 3 907 997 239 5 0 chr15 42288417 42288626 -61206348 + B3 SINE B2 1 210 -6 3 907 869 321 47 63 chr15 42288626 42288895 -61206079 - ORR1E LTR MaLR -89 270 4 3 907 243 0 0 0 chr15 42289585 42289612 -61205362 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 907 207 0 0 0 chr15 42290684 42290707 -61204267 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 907 1236 95 0 0 chr15 42292462 42292515 -61202459 + (GAA)n Simple_repeat Simple_repeat 1 53 0 3 907 1467 34 0 0 chr15 42292515 42292692 -61202282 + (GGGAGA)n Simple_repeat Simple_repeat 4 180 0 3 907 1236 95 0 0 chr15 42292692 42292817 -61202157 + (GAA)n Simple_repeat Simple_repeat 3 127 0 3 907 1308 79 0 0 chr15 42292817 42292995 -61201979 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 3 907 631 159 19 31 chr15 42292995 42293157 -61201817 + GA-rich Low_complexity Low_complexity 2 161 0 3 907 426 20 0 0 chr15 42293739 42293790 -61201184 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 907 234 0 0 0 chr15 42293942 42293968 -61201006 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 907 643 243 124 67 chr15 42293990 42294215 -61200759 - B4A SINE B4 -14 278 41 3 907 1366 238 55 36 chr15 42295723 42296141 -61198833 + RMER5 LTR ERV1 33 458 -76 3 907 402 21 0 0 chr15 42296412 42296459 -61198515 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 907 474 200 199 7 chr15 42296798 42296949 -61198025 + Lx2B LINE L1 6811 6990 -10 3 907 181 345 33 33 chr15 42301159 42301249 -61193725 - L2c LINE L2 -1 3386 3297 3 907 240 122 0 0 chr15 42302370 42302411 -61192563 + (TATATG)n Simple_repeat Simple_repeat 4 44 0 3 907 424 231 15 0 chr15 42302413 42302543 -61192431 + (TCCA)n Simple_repeat Simple_repeat 2 133 0 3 907 360 0 0 0 chr15 42303018 42303058 -61191916 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 907 22 0 0 0 chr15 42303146 42303168 -61191806 + AT_rich Low_complexity Low_complexity 1 22 0 3 907 24 32 0 0 chr15 42303222 42303253 -61191721 + AT_rich Low_complexity Low_complexity 1 31 0 3 907 1471 226 21 9 chr15 42304259 42304589 -61190385 + Lx7 LINE L1 7079 7412 -284 3 907 243 0 0 0 chr15 42304589 42304616 -61190358 + (TTG)n Simple_repeat Simple_repeat 1 27 0 3 907 189 0 0 0 chr15 42304616 42304637 -61190337 + (TGG)n Simple_repeat Simple_repeat 3 23 0 3 907 402 39 0 0 chr15 42304637 42304689 -61190285 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 907 582 15 0 0 chr15 42304842 42304909 -61190065 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 3 907 1234 151 139 0 chr15 42304994 42305232 -61189742 - Lx2 LINE L1 -3 6994 6724 3 907 189 301 157 0 chr15 42306467 42306550 -61188424 - MIRm SINE MIR -17 259 164 3 907 1884 120 0 7 chr15 42306681 42306975 -61187999 - Lx LINE L1 0 6654 6363 3 907 21 0 0 0 chr15 42308266 42308287 -61186687 + AT_rich Low_complexity Low_complexity 1 21 0 3 907 23 54 0 0 chr15 42308401 42308438 -61186536 + AT_rich Low_complexity Low_complexity 1 37 0 3 907 1195 309 170 8 chr15 42308590 42309292 -61185682 - Lx8 LINE L1 -60 7413 6599 3 907 243 284 111 8 chr15 42309560 42309677 -61185297 - RLTR25B LTR ERVK -656 372 244 3 907 547 183 8 27 chr15 42309604 42309725 -61185249 - B1_Mus2 SINE Alu -8 141 1 3 907 500 76 12 12 chr15 42309739 42309819 -61185155 + RLTR9A2 LTR ERVK 1 80 -303 3 907 398 176 14 0 chr15 42309816 42309890 -61185084 + RLTR9A2 LTR ERVK 308 382 -1 3 907 210 71 0 0 chr15 42310785 42310813 -61184161 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 907 392 67 17 0 chr15 42312489 42312549 -61182425 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 907 441 0 0 0 chr15 42312549 42312597 -61182377 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 907 2094 32 4 0 chr15 42312733 42312983 -61181991 + L1_Mus1 LINE L1 6317 6567 0 3 907 2293 48 0 14 chr15 42312994 42313289 -61181685 + L1Md_F2 LINE L1 6292 6582 0 3 907 204 185 0 0 chr15 42315764 42315818 -61179156 + A-rich Low_complexity Low_complexity 2 55 0 3 907 216 0 0 0 chr15 42318485 42318509 -61176465 + (TTTTC)n Simple_repeat Simple_repeat 1 24 0 3 907 864 159 0 0 chr15 42318511 42318668 -61176306 + CT-rich Low_complexity Low_complexity 6 162 0 3 907 315 0 0 0 chr15 42318669 42318704 -61176270 + (TTA)n Simple_repeat Simple_repeat 3 37 0 4 907 371 312 84 23 chr15 42318721 42318852 -61176122 - RSINE1 SINE B4 -21 144 6 4 907 3385 52 4 26 chr15 42321911 42322363 -61172611 - L1_Mus2 LINE L1 -1 6565 6124 4 907 217 299 30 0 chr15 42322672 42322739 -61172235 + MIR SINE MIR 2 70 -192 4 907 694 291 0 74 chr15 42323051 42323240 -61171734 - B4 SINE B4 0 292 118 4 907 197 280 77 0 chr15 42324174 42324242 -61170732 - MIR SINE MIR -84 184 115 4 907 2739 57 0 0 chr15 42324534 42324866 -61170108 - IAPEY3_LTR LTR ERVK 0 332 1 4 907 27 87 0 0 chr15 42324992 42325061 -61169913 + AT_rich Low_complexity Low_complexity 1 69 0 4 907 1758 75 0 23 chr15 42325466 42325724 -61169250 - L1Md_F2 LINE L1 -1 6581 6330 4 907 288 359 62 14 chr15 42328152 42328296 -61166678 - RSINE1 SINE B4 -12 153 3 4 907 254 270 0 0 chr15 42328336 42328399 -61166575 + L1_Mm LINE L1 5375 5437 -446 4 907 560 299 49 0 chr15 42328430 42328574 -61166400 + B3 SINE B2 29 179 -37 4 907 310 311 49 102 chr15 42329590 42329894 -61165080 - L1M4c LINE L1 -5160 1224 937 4 907 189 94 0 0 chr15 42330928 42330960 -61164014 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 4 907 517 282 131 11 chr15 42331783 42331966 -61163008 - B3 SINE B2 -9 207 3 4 907 1032 295 85 6 chr15 42332203 42332534 -61162440 + ORR1D2 LTR MaLR 14 370 0 4 907 561 286 69 29 chr15 42332709 42332882 -61162092 - B3A SINE B2 -5 193 14 4 907 204 241 0 0 chr15 42334372 42334430 -61160544 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 907 315 380 21 7 chr15 42334542 42334685 -61160289 + B1F1 SINE Alu 5 149 0 4 907 1034 45 90 0 chr15 42335308 42335442 -61159532 + B1_Mm SINE Alu 2 147 0 4 907 297 306 52 117 chr15 42335610 42335936 -61159038 - L2c LINE L2 0 3387 3083 4 907 332 333 70 23 chr15 42336008 42336223 -61158751 - MIR SINE MIR -8 254 30 4 908 1064 212 21 9 chr15 42336301 42336534 -61158440 + Lx5 LINE L1 6815 7050 0 4 908 217 390 0 0 chr15 42337025 42337107 -61157867 - ID4 SINE ID 0 83 2 4 908 254 237 0 0 chr15 42337626 42337678 -61157296 - B1_Mus2 SINE Alu -95 53 2 4 908 616 208 20 46 chr15 42337702 42337853 -61157121 - B1_Mur2 SINE Alu -2 147 1 4 908 200 228 17 17 chr15 42339594 42339617 -61155357 + (TATATG)n Simple_repeat Simple_repeat 3 25 0 4 908 312 27 0 0 chr15 42339617 42339654 -61155320 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 908 200 228 17 17 chr15 42339654 42339688 -61155286 + (TATATG)n Simple_repeat Simple_repeat 5 38 0 4 908 324 0 0 0 chr15 42339790 42339826 -61155148 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 908 215 0 0 62 chr15 42340090 42340122 -61154852 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 4 908 245 239 28 14 chr15 42340425 42340497 -61154477 - ID2 SINE ID -9 74 2 4 908 201 74 0 0 chr15 42340964 42340991 -61153983 + (T)n Simple_repeat Simple_repeat 1 27 0 4 908 1898 91 11 0 chr15 42341027 42341292 -61153682 - L1_Mus1 LINE L1 -14 6553 6286 4 908 38 22 0 0 chr15 42341306 42341351 -61153623 + AT_rich Low_complexity Low_complexity 1 45 0 4 908 1072 273 32 29 chr15 42341526 42341900 -61153074 - MTEa LTR MaLR 0 379 5 4 908 378 0 0 0 chr15 42342207 42342249 -61152725 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 908 516 68 0 0 chr15 42342258 42342331 -61152643 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 4 908 209 360 22 0 chr15 42342870 42342959 -61152015 + MIRb SINE MIR 47 137 -131 4 908 236 179 12 49 chr15 42344947 42345029 -61149945 + T-rich Low_complexity Low_complexity 1 79 0 4 908 363 244 194 54 chr15 42345719 42345961 -61149013 + Lx8 LINE L1 7193 7468 -5 4 908 3193 172 30 39 chr15 42346368 42346534 -61148440 - RMER1B Other Other 0 1066 919 4 908 390 57 0 0 chr15 42346534 42346587 -61148387 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 908 3193 172 30 39 chr15 42346587 42347042 -61147932 - RMER1B Other Other -148 918 450 4 908 1466 267 34 8 chr15 42347043 42347398 -61147576 + MTD LTR MaLR 48 411 -8 4 908 249 334 106 40 chr15 42347531 42347921 -61147053 + L2c LINE L2 2717 3133 -254 4 908 31 0 0 0 chr15 42348729 42348760 -61146214 + AT_rich Low_complexity Low_complexity 1 31 0 4 908 681 13 0 0 chr15 42348964 42349042 -61145932 + (TC)n Simple_repeat Simple_repeat 2 79 0 4 908 26 74 0 0 chr15 42349603 42349657 -61145317 + AT_rich Low_complexity Low_complexity 1 54 0 4 908 1060 305 41 35 chr15 42350383 42350726 -61144248 + ORR1E LTR MaLR 1 345 -14 4 908 1020 328 54 16 chr15 42351188 42351616 -61143358 - LTR16B2 LTR ERVL -5 457 14 4 908 288 405 23 6 chr15 42352125 42352299 -61142675 + MIR SINE MIR 27 203 -59 4 908 528 16 0 0 chr15 42353600 42353661 -61141313 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 908 192 77 0 0 chr15 42354237 42354263 -61140711 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 4 908 390 21 0 0 chr15 42355517 42355564 -61139410 + (TC)n Simple_repeat Simple_repeat 1 47 0 4 908 184 343 92 9 chr15 42356174 42356283 -61138691 - MIRc SINE MIR -112 156 39 4 908 412 322 35 104 chr15 42356998 42357258 -61137716 + MLT1K LTR MaLR 289 530 -65 4 908 301 355 49 22 chr15 42357880 42358064 -61136910 - Charlie10b DNA MER1_type -1 241 53 4 908 300 374 38 28 chr15 42362515 42362727 -61132247 + L2 LINE L2 2660 2873 -546 4 908 552 328 102 23 chr15 42362824 42363089 -61131885 - B4A SINE B4 -6 286 1 4 908 2061 219 17 74 chr15 42363335 42363480 -61131494 - Lx7 LINE L1 -305 7391 7266 4 908 1094 48 0 0 chr15 42363480 42363625 -61131349 - L1Md_A LINE L1 0 6582 6438 4 908 2061 219 17 74 chr15 42363625 42364006 -61130968 - Lx7 LINE L1 -431 7265 6895 4 908 210 143 0 0 chr15 42364025 42364060 -61130914 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 908 237 202 58 23 chr15 42364075 42364161 -61130813 - L1MCa LINE L1 -4549 1959 1871 4 908 208 351 0 0 chr15 42364252 42364329 -61130645 + GA-rich Low_complexity Low_complexity 3 79 0 4 908 22 70 0 0 chr15 42364435 42364478 -61130496 + AT_rich Low_complexity Low_complexity 1 43 0 4 908 2654 300 85 20 chr15 42365639 42366726 -61128248 - Lx9 LINE L1 -161 7483 6327 4 908 387 0 0 0 chr15 42368126 42368169 -61126805 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 908 25 0 0 0 chr15 42368260 42368285 -61126689 + AT_rich Low_complexity Low_complexity 1 25 0 4 908 653 296 9 33 chr15 42368306 42368516 -61126458 - B3 SINE B2 -11 205 1 4 908 183 278 174 62 chr15 42368520 42368681 -61126293 - MIRc SINE MIR -63 205 27 4 908 234 207 0 0 chr15 42368713 42368771 -61126203 + (TATG)n Simple_repeat Simple_repeat 1 58 0 4 908 785 253 68 0 chr15 42369535 42369725 -61125249 + B3 SINE B2 1 203 -13 4 908 297 0 0 0 chr15 42370351 42370384 -61124590 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 908 2437 276 117 10 chr15 42370947 42371809 -61123165 + RCHARR1 DNA MER1_type 8 961 -13 4 908 265 197 30 0 chr15 42371893 42371959 -61123015 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 908 507 17 0 0 chr15 42371961 42372021 -61122953 + (TC)n Simple_repeat Simple_repeat 1 60 0 4 908 342 0 0 0 chr15 42372021 42372058 -61122916 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 908 237 333 28 37 chr15 42372261 42372370 -61122604 - MIRb SINE MIR -27 241 134 4 908 1078 214 66 114 chr15 42372458 42372791 -61122183 - Lx5 LINE L1 -1 7049 6733 4 908 324 120 0 0 chr15 42372978 42373028 -61121946 + (CAGG)n Simple_repeat Simple_repeat 2 51 0 4 908 24 85 0 0 chr15 42373564 42373623 -61121351 + AT_rich Low_complexity Low_complexity 1 59 0 4 908 266 284 11 43 chr15 42373882 42373974 -61121000 - B4 SINE B4 -201 91 3 4 908 696 83 0 0 chr15 42374309 42374405 -61120569 + (TG)n Simple_repeat Simple_repeat 1 96 0 4 908 367 302 73 78 chr15 42375541 42375760 -61119214 - MER20 DNA MER1_type -1 218 1 4 908 180 0 0 0 chr15 42376073 42376093 -61118881 + (T)n Simple_repeat Simple_repeat 1 20 0 4 908 325 149 0 86 chr15 42377094 42377175 -61117799 - B1_Mur3 SINE Alu -1 148 75 4 908 2267 60 10 7 chr15 42377184 42377486 -61117488 - L1_Mus2 LINE L1 0 6566 6264 4 908 2186 60 3 0 chr15 42377487 42377771 -61117203 + L1_Mus2 LINE L1 5747 6031 -535 4 908 238 209 0 0 chr15 42377771 42377814 -61117160 - B1_Mus2 SINE Alu -65 82 40 4 908 204 219 24 0 chr15 42378072 42378113 -61116861 + GA-rich Low_complexity Low_complexity 3 44 0 4 908 1086 128 0 0 chr15 42378113 42378285 -61116689 + (GAGAA)n Simple_repeat Simple_repeat 5 176 0 4 908 492 200 47 16 chr15 42379407 42379533 -61115441 - PB1D9 SINE Alu 0 150 8 4 908 227 311 155 70 chr15 42379446 42379588 -61115386 - MT2B LTR ERVL -350 251 98 4 908 296 320 0 0 chr15 42380320 42380398 -61114576 + ID4 SINE ID 5 82 -1 4 908 5659 189 56 21 chr15 42382214 42383117 -61111857 + Lx5 LINE L1 5865 6811 -239 4 908 342 0 0 0 chr15 42383117 42383155 -61111819 + (GA)n Simple_repeat Simple_repeat 1 38 0 4 908 5659 189 56 21 chr15 42383155 42383391 -61111583 + Lx5 LINE L1 6812 7044 -6 4 908 452 296 23 0 chr15 42384274 42384406 -61110568 + B4 SINE B4 7 141 -151 4 908 1019 243 62 122 chr15 42384520 42384653 -61110321 + MTE2b LTR MaLR 1 116 -263 4 908 405 0 0 0 chr15 42384653 42384698 -61110276 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 908 1019 243 62 122 chr15 42384698 42384967 -61110007 + MTE2b LTR MaLR 117 379 0 4 908 244 214 0 35 chr15 42385018 42385076 -61109898 + (CATA)n Simple_repeat Simple_repeat 1 56 0 4 908 430 223 16 0 chr15 42385188 42385309 -61109665 + (TA)n Simple_repeat Simple_repeat 2 124 0 5 908 22 0 0 0 chr15 42387103 42387125 -61107849 + AT_rich Low_complexity Low_complexity 1 22 0 5 908 581 275 55 30 chr15 42387413 42387578 -61107396 - MER63A DNA AcHobo -10 200 32 5 908 187 356 14 0 chr15 42387608 42387681 -61107293 - MIR3 SINE MIR -24 184 111 5 908 1201 239 42 17 chr15 42387959 42388248 -61106726 + ORR1D1 LTR MaLR 1 296 -78 5 908 1696 202 28 0 chr15 42388248 42388569 -61106405 - ORR1C1 LTR MaLR -48 330 1 5 908 479 141 43 11 chr15 42388569 42388661 -61106313 + ORR1D1 LTR MaLR 280 374 0 5 908 456 355 34 64 chr15 42388888 42389077 -61105897 + Charlie1a DNA MER1_type 1 176 -1279 5 908 4647 60 48 10 chr15 42389077 42389685 -61105289 - L1_Mus1 LINE L1 -1 6566 5936 5 908 456 355 34 64 chr15 42389685 42389760 -61105214 + Charlie1a DNA MER1_type 177 257 -1198 5 908 338 281 56 0 chr15 42390979 42391068 -61103906 - RSINE1 SINE B4 -46 119 26 5 908 23 33 0 0 chr15 42391126 42391156 -61103818 + AT_rich Low_complexity Low_complexity 1 30 0 5 908 23 0 0 0 chr15 42391850 42391873 -61103101 + AT_rich Low_complexity Low_complexity 1 23 0 5 908 462 223 40 55 chr15 42391914 42392057 -61102917 - B1F1 SINE Alu -7 142 1 5 908 22 0 0 0 chr15 42392076 42392098 -61102876 + AT_rich Low_complexity Low_complexity 1 22 0 5 908 5619 80 23 5 chr15 42392310 42393106 -61101868 + L1Md_F2 LINE L1 5772 6581 -1 5 908 1027 259 95 18 chr15 42393328 42393666 -61101308 - MTEa LTR MaLR 0 379 16 5 908 250 333 39 62 chr15 42393672 42393800 -61101174 + B4A SINE B4 7 131 -161 5 908 836 118 7 0 chr15 42393970 42394106 -61100868 + (TTC)n Simple_repeat Simple_repeat 1 137 0 5 908 1330 234 73 65 chr15 42394127 42394525 -61100449 + MTD LTR MaLR 19 419 0 5 908 276 30 0 0 chr15 42395071 42395104 -61099870 + (CGTG)n Simple_repeat Simple_repeat 1 33 0 5 908 187 261 109 0 chr15 42396067 42396113 -61098861 - MIR SINE MIR -191 71 21 5 908 1092 302 29 34 chr15 42396917 42397298 -61097676 - MTE2a LTR MaLR 0 379 1 5 908 219 69 0 0 chr15 42397466 42397495 -61097479 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 5 908 23 0 0 0 chr15 42397863 42397886 -61097088 + AT_rich Low_complexity Low_complexity 1 23 0 5 908 270 0 0 0 chr15 42399388 42399418 -61095556 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 908 348 24 0 0 chr15 42399639 42399680 -61095294 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 908 591 323 125 19 chr15 42400264 42400520 -61094454 + B4A SINE B4 3 285 -7 5 908 441 0 0 0 chr15 42400520 42400569 -61094405 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 908 261 306 201 23 chr15 42400996 42401210 -61093764 + Lx8 LINE L1 7162 7413 -60 5 908 1065 237 0 10 chr15 42401276 42401485 -61093489 + B3 SINE B2 1 207 -9 5 908 23 33 0 0 chr15 42401485 42401515 -61093459 + AT_rich Low_complexity Low_complexity 1 30 0 5 908 1482 173 92 19 chr15 42402012 42402323 -61092651 - RMER6C LTR ERVK 0 690 366 5 908 1080 96 0 33 chr15 42402323 42402507 -61092467 + (TCTCCC)n Simple_repeat Simple_repeat 3 180 0 5 908 1482 173 92 19 chr15 42402507 42402554 -61092420 - RMER6C LTR ERVK -325 365 306 5 908 279 0 0 0 chr15 42402743 42402774 -61092200 + (A)n Simple_repeat Simple_repeat 1 31 0 5 908 973 209 204 68 chr15 42403265 42403416 -61091558 + ORR1C2 LTR MaLR 1 180 -204 5 908 843 59 0 0 chr15 42403416 42403534 -61091440 + (TC)n Simple_repeat Simple_repeat 1 118 0 5 908 973 209 204 68 chr15 42403534 42403720 -61091254 + ORR1C2 LTR MaLR 181 384 0 5 908 821 298 91 47 chr15 42403838 42404113 -61090861 + B4A SINE B4 6 292 0 5 908 193 315 0 99 chr15 42406070 42406151 -61088823 + L2a LINE L2 3354 3426 0 5 908 318 54 0 0 chr15 42407203 42407240 -61087734 + L1_Mm LINE L1 5550 5586 -297 5 908 8993 5 0 0 chr15 42407240 42408236 -61086738 + L1Md_T LINE L1 5587 6582 0 5 908 365 244 0 47 chr15 42408248 42408334 -61086640 - ID_B1 SINE B4 -7 217 136 5 908 25 0 0 0 chr15 42408408 42408433 -61086541 + AT_rich Low_complexity Low_complexity 1 25 0 5 908 228 352 32 54 chr15 42409404 42409590 -61085384 - MIR SINE MIR -69 193 12 5 908 264 59 0 0 chr15 42409881 42409915 -61085059 + (T)n Simple_repeat Simple_repeat 1 34 0 5 908 504 32 0 0 chr15 42410147 42410209 -61084765 + (CA)n Simple_repeat Simple_repeat 2 63 0 5 908 403 286 78 62 chr15 42410223 42410402 -61084572 - MLT1L LTR MaLR -111 499 318 5 908 4257 70 0 64 chr15 42410481 42411095 -61083879 + L1_Mm LINE L1 3697 4273 -1610 5 908 7641 44 5 0 chr15 42411095 42412027 -61082947 + L1Md_F2 LINE L1 5643 6579 -3 5 908 4257 70 0 64 chr15 42412027 42412066 -61082908 + L1_Mm LINE L1 4274 4308 -1575 5 908 605 190 6 0 chr15 42412337 42412511 -61082463 + (TG)n Simple_repeat Simple_repeat 2 176 0 5 908 495 291 0 34 chr15 42413208 42413354 -61081620 + ID_B1 SINE B4 84 224 0 5 908 32 43 0 0 chr15 42414235 42414281 -61080693 + AT_rich Low_complexity Low_complexity 1 46 0 5 908 28 48 0 0 chr15 42414455 42414497 -61080477 + AT_rich Low_complexity Low_complexity 1 42 0 5 908 1076 91 0 0 chr15 42414536 42414679 -61080295 - B1_Mus1 SINE Alu -3 145 3 5 908 510 262 7 26 chr15 42414750 42414903 -61080071 + Lx7 LINE L1 7547 7696 0 5 908 319 316 7 62 chr15 42415544 42415689 -61079285 + MIR SINE MIR 113 249 -13 5 908 396 0 0 0 chr15 42417088 42417132 -61077842 + (A)n Simple_repeat Simple_repeat 1 44 0 5 908 243 0 0 0 chr15 42417840 42417867 -61077107 + (A)n Simple_repeat Simple_repeat 1 27 0 5 908 345 209 0 0 chr15 42419409 42419572 -61075402 + (CTG)n Simple_repeat Simple_repeat 1 163 0 5 908 441 95 0 0 chr15 42419954 42420017 -61074957 + (TTA)n Simple_repeat Simple_repeat 1 63 0 5 908 354 246 122 8 chr15 42421191 42421322 -61073652 + RSINE1 SINE B4 1 146 -19 5 908 1426 160 148 15 chr15 42421334 42421664 -61073310 + ORR1D1 LTR MaLR 1 374 0 5 908 295 189 44 11 chr15 42421670 42421761 -61073213 + (TAGA)n Simple_repeat Simple_repeat 4 97 0 5 908 396 0 0 0 chr15 42422004 42422048 -61072926 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 908 330 354 69 0 chr15 42424234 42424364 -61070610 + MTE2a LTR MaLR 218 356 -23 5 908 1719 189 102 0 chr15 42424443 42424786 -61070188 + ORR1C2 LTR MaLR 3 380 -4 5 908 543 287 146 43 chr15 42424900 42425133 -61069841 + Tigger5 DNA MER2_type 1 257 -2149 5 908 757 216 118 36 chr15 42425129 42425350 -61069624 + Tigger5 DNA MER2_type 2168 2406 0 5 908 635 293 64 30 chr15 42425634 42425898 -61069076 + B4A SINE B4 2 274 -18 5 908 396 59 0 0 chr15 42425940 42425991 -61068983 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 908 683 276 53 16 chr15 42426366 42426554 -61068420 + B3 SINE B2 5 199 -17 5 908 1661 70 32 20 chr15 42427166 42427412 -61067562 - L1Md_F2 LINE L1 0 6582 6334 5 908 366 265 44 88 chr15 42427414 42427519 -61067455 + L1MA9 LINE L1 5844 5938 -353 5 908 216 0 0 0 chr15 42427519 42427543 -61067431 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 908 295 265 44 88 chr15 42427543 42427619 -61067355 + L1MA9 LINE L1 5939 6017 -274 5 908 4972 67 5 0 chr15 42427775 42428467 -61066507 + L1_Mus1 LINE L1 5926 6567 0 5 908 18254 133 9 107 chr15 42428556 42432537 -61062437 + L1Md_F2 LINE L1 357 3871 -2012 5 908 9046 1 0 0 chr15 42432537 42433533 -61061441 + L1Md_A LINE L1 5587 6582 0 5 908 18254 146 11 137 chr15 42433533 42435411 -61059563 + L1Md_F2 LINE L1 3872 5585 -298 5 908 7871 59 0 4 chr15 42435412 42436412 -61058562 + L1Md_F2 LINE L1 5587 6582 0 5 908 216 0 0 0 chr15 42439212 42439236 -61055738 + (TC)n Simple_repeat Simple_repeat 1 24 0 5 908 410 317 91 19 chr15 42440093 42440394 -61054580 + MER57C2 LTR ERV1 5 340 -71 5 908 23 68 0 0 chr15 42440876 42440920 -61054054 + AT_rich Low_complexity Low_complexity 1 44 0 5 908 248 350 30 11 chr15 42441422 42441578 -61053396 + MER63B DNA AcHobo 279 434 -2 5 908 1161 22 0 0 chr15 42442288 42442426 -61052548 - L1_Mus1 LINE L1 -511 6056 5919 5 908 3757 67 0 10 chr15 42442426 42442912 -61052062 + L1_Mus1 LINE L1 6087 6567 0 5 908 2988 107 30 2 chr15 42443345 42443786 -61051188 - L1_Mus4 LINE L1 -5 6631 6179 5 908 1319 270 12 88 chr15 42444135 42444550 -61050424 - MTE2b LTR MaLR 0 419 29 5 908 263 190 0 134 chr15 42445509 42445576 -61049398 - B1_Mur1 SINE Alu -3 146 89 5 908 191 260 40 40 chr15 42451200 42451276 -61043698 - L2a LINE L2 -2 3424 3349 5 908 252 254 101 157 chr15 42451410 42451569 -61043405 + RSINE1 SINE B4 16 165 0 5 908 205 333 94 54 chr15 42451688 42451837 -61043137 - MIR SINE MIR -64 198 44 5 908 216 0 0 0 chr15 42452094 42452118 -61042856 + (T)n Simple_repeat Simple_repeat 1 24 0 5 908 28 0 0 0 chr15 42452662 42452690 -61042284 + AT_rich Low_complexity Low_complexity 1 28 0 5 908 317 264 216 21 chr15 42453697 42453905 -61041069 - HAL1-3A_ME LINE L1 -418 2440 2284 5 908 464 76 30 0 chr15 42456339 42456405 -61038569 + B1_Mur4 SINE Alu 82 149 -1 5 908 291 93 0 0 chr15 42456413 42456456 -61038518 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 5 908 519 279 61 37 chr15 42456476 42456640 -61038334 + ORR1E LTR MaLR 1 168 -191 5 908 535 173 24 9 chr15 42456747 42456906 -61038068 + RLTR9E LTR ERVK 1 127 -282 5 908 372 296 28 13 chr15 42456873 42457031 -61037943 + ORR1E LTR MaLR 212 379 0 5 908 229 385 76 38 chr15 42457398 42457660 -61037314 - L3 LINE CR1 -92 4397 4126 5 908 415 318 51 20 chr15 42457747 42457904 -61037070 + MIRb SINE MIR 22 184 -84 5 908 378 0 0 0 chr15 42457904 42457946 -61037028 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 908 415 318 51 20 chr15 42457946 42457984 -61036990 + MIRb SINE MIR 185 222 -46 5 908 690 310 73 13 chr15 42458474 42458706 -61036268 + B4A SINE B4 14 259 -33 5 908 267 226 0 0 chr15 42458748 42458850 -61036124 + GA-rich Low_complexity Low_complexity 1 102 0 5 908 1117 95 0 0 chr15 42459002 42459150 -61035824 - B1_Mus1 SINE Alu 0 148 1 5 908 212 330 62 31 chr15 42459803 42459900 -61035074 + MIRm SINE MIR 20 119 -157 5 908 270 0 0 0 chr15 42460709 42460739 -61034235 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 908 227 294 76 0 chr15 42462581 42462673 -61032301 - BC1_Mm scRNA scRNA -53 99 1 6 908 283 351 45 22 chr15 42462674 42462852 -61032122 + L2 LINE L2 2313 2494 -925 6 908 1184 207 85 0 chr15 42462859 42463105 -61031869 + RLTR16 LTR ERVK 3 269 -236 6 908 202 382 152 18 chr15 42463306 42463530 -61031444 + L2 LINE L2 2496 2749 -670 6 908 21 0 0 0 chr15 42464542 42464563 -61030411 + AT_rich Low_complexity Low_complexity 1 21 0 6 908 327 85 0 0 chr15 42465103 42465150 -61029824 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 908 345 47 0 0 chr15 42465699 42465742 -61029232 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 908 790 62 53 9 chr15 42465941 42466055 -61028919 + B1_Mm SINE Alu 17 135 -12 6 909 405 123 0 0 chr15 42467595 42467660 -61027314 + (CA)n Simple_repeat Simple_repeat 2 66 0 6 909 186 345 0 0 chr15 42467741 42467825 -61027149 - MIRb SINE MIR -15 253 170 6 909 306 0 0 0 chr15 42468168 42468202 -61026772 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 909 21 0 0 0 chr15 42468232 42468253 -61026721 + AT_rich Low_complexity Low_complexity 1 21 0 6 909 1295 304 126 26 chr15 42468985 42469565 -61025409 - Lx8 LINE L1 0 7473 6836 6 909 328 363 12 12 chr15 42469605 42469841 -61025133 + B4A SINE B4 2 288 -4 6 909 271 320 40 0 chr15 42470254 42470354 -61024620 - PB1D10 SINE Alu -10 107 4 6 909 230 106 0 78 chr15 42470796 42470847 -61024127 + T-rich Low_complexity Low_complexity 6 52 0 6 909 714 44 0 0 chr15 42471904 42471994 -61022980 + (TTTTA)n Simple_repeat Simple_repeat 5 94 0 6 909 967 93 47 0 chr15 42471994 42472123 -61022851 - B1_Mus2 SINE Alu -11 136 2 6 909 213 121 0 0 chr15 42472164 42472197 -61022777 + (CATATA)n Simple_repeat Simple_repeat 1 33 0 6 909 666 138 0 0 chr15 42472196 42472305 -61022669 + (TG)n Simple_repeat Simple_repeat 2 110 0 6 909 213 132 0 0 chr15 42473688 42473726 -61021248 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 909 279 0 0 0 chr15 42474284 42474315 -61020659 + (TTAA)n Simple_repeat Simple_repeat 1 31 0 6 909 1184 61 0 0 chr15 42474317 42474465 -61020509 + B1_Mus1 SINE Alu 1 148 0 6 909 183 42 0 0 chr15 42475553 42475577 -61019397 + (CAA)n Simple_repeat Simple_repeat 2 25 0 6 909 759 315 69 0 chr15 42475750 42475982 -61018992 + B4A SINE B4 4 251 -41 6 909 37868 31 0 0 chr15 42475989 42482634 -61012340 - L1Md_T LINE L1 0 6585 1 6 909 207 178 0 43 chr15 42482663 42482710 -61012264 + (CATA)n Simple_repeat Simple_repeat 3 47 0 6 909 213 357 12 12 chr15 42483056 42483141 -61011833 + B4A SINE B4 3 87 -205 6 909 251 277 12 24 chr15 42483639 42483724 -61011250 + (CA)n Simple_repeat Simple_repeat 1 84 0 6 909 21 0 0 0 chr15 42485826 42485847 -61009127 + AT_rich Low_complexity Low_complexity 1 21 0 6 909 495 333 0 0 chr15 42487721 42487853 -61007121 + B3A SINE B2 31 162 -36 6 909 513 44 0 0 chr15 42487857 42487925 -61007049 + (CA)n Simple_repeat Simple_repeat 2 69 0 6 909 540 293 66 74 chr15 42489784 42490164 -61004810 - L1MC3 LINE L1 -350 7435 7059 6 909 542 372 0 30 chr15 42493970 42494172 -61000802 + B3A SINE B2 3 198 0 6 909 451 261 35 18 chr15 42496780 42496937 -60998037 - MIR SINE MIR -49 219 53 6 909 652 90 13 46 chr15 42497565 42497716 -60997258 + (GGGA)n Simple_repeat Simple_repeat 3 148 0 6 909 2701 124 45 30 chr15 42497890 42498362 -60996612 + Lx2 LINE L1 6515 6993 -4 6 909 257 256 11 23 chr15 42499103 42499191 -60995783 + Lx6 LINE L1 7374 7460 0 6 909 588 210 27 40 chr15 42499257 42499406 -60995568 + B4 SINE B4 77 223 -69 6 909 740 74 9 0 chr15 42499415 42499523 -60995451 + (TAGA)n Simple_repeat Simple_repeat 4 112 0 6 909 23 33 0 0 chr15 42499644 42499674 -60995300 + AT_rich Low_complexity Low_complexity 1 30 0 6 909 256 188 29 0 chr15 42500865 42500934 -60994040 + GA-rich Low_complexity Low_complexity 2 72 0 1 909 686 317 5 47 chr15 42501630 42501845 -60993129 - MER58A DNA MER1_type -17 207 2 2 909 605 306 146 11 chr15 42502000 42502281 -60992693 - MER2 DNA MER2_type -3 342 24 3 909 228 301 85 74 chr15 42502426 42502602 -60992372 - L2b LINE L2 -21 3405 3228 4 909 3428 218 108 39 chr15 42502612 42503677 -60991297 + Lx9 LINE L1 6501 7638 -6 5 909 290 326 115 47 chr15 42503735 42504071 -60990903 - L2b LINE L2 -214 3161 2804 4 909 481 244 61 68 chr15 42504288 42504420 -60990554 + B4 SINE B4 161 291 -1 6 909 276 30 0 0 chr15 42504443 42504476 -60990498 + (TAA)n Simple_repeat Simple_repeat 3 35 0 7 909 488 242 0 116 chr15 42504480 42504639 -60990335 + B1F SINE Alu 10 147 -2 8 909 330 152 0 0 chr15 42504673 42504732 -60990242 + (CAG)n Simple_repeat Simple_repeat 1 59 0 9 909 588 244 61 0 chr15 42504745 42504876 -60990098 + RSINE1 SINE B4 5 143 -22 1 909 35 24 0 0 chr15 42508745 42508787 -60986187 + AT_rich Low_complexity Low_complexity 1 42 0 1 909 280 319 22 0 chr15 42509799 42509890 -60985084 - MIR SINE MIR -18 244 152 1 909 186 43 0 0 chr15 42509943 42509966 -60985008 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1 909 596 269 121 6 chr15 42510049 42510206 -60984768 - ID_B1 SINE B4 -46 178 4 1 909 199 382 56 25 chr15 42511561 42511722 -60983252 - MIRb SINE MIR -51 217 52 1 909 1223 42 0 0 chr15 42513263 42513407 -60981567 + B1_Mm SINE Alu 2 145 -2 1 909 492 229 389 15 chr15 42513441 42513715 -60981259 + ORR1D2 LTR MaLR 1 377 -2 1 909 264 364 43 43 chr15 42514670 42514831 -60980143 + MIRb SINE MIR 66 226 -42 1 909 500 211 9 35 chr15 42515093 42515206 -60979768 + L2a LINE L2 3316 3425 -1 1 909 226 358 108 36 chr15 42516113 42516307 -60978667 - MER113A DNA MER1_type -104 210 3 2 909 332 279 14 75 chr15 42516913 42517060 -60977914 - MIRb SINE MIR -6 262 125 2 909 353 277 14 110 chr15 42517411 42517557 -60977417 - B2_Mm2 SINE B2 -63 132 1 2 909 261 314 39 10 chr15 42517807 42517910 -60977064 + MER5A DNA MER1_type 1 106 -83 2 909 265 287 80 58 chr15 42518004 42518141 -60976833 - MER5B DNA MER1_type -33 145 6 2 909 283 259 19 0 chr15 42518803 42518911 -60976063 + L1M4 LINE L1 5759 5868 -316 2 909 1172 234 79 122 chr15 42519677 42520144 -60974830 + MLT1D LTR MaLR 59 505 0 2 909 230 271 124 29 chr15 42520194 42520331 -60974643 - L2 LINE L2 -457 2962 2813 2 909 351 0 0 0 chr15 42520531 42520570 -60974404 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 2 909 212 376 0 21 chr15 42520604 42520699 -60974275 - L2 LINE L2 -1178 2241 2149 2 909 494 70 0 14 chr15 42521955 42522027 -60972947 + (GGAA)n Simple_repeat Simple_repeat 3 73 0 2 909 492 305 126 14 chr15 42522199 42522389 -60972585 + B3A SINE B2 2 204 -12 3 909 21 36 0 0 chr15 42522458 42522486 -60972488 + AT_rich Low_complexity Low_complexity 1 28 0 3 909 3815 70 2 18 chr15 42522492 42523004 -60971970 - L1_Mus2 LINE L1 0 6566 6063 3 909 1325 65 5 0 chr15 42523004 42523189 -60971785 + L1_Mm LINE L1 4985 5170 -713 3 909 322 255 19 0 chr15 42523180 42523286 -60971688 - Lx7 LINE L1 -8 7688 7581 3 909 495 241 41 10 chr15 42523341 42523467 -60971507 - B1_Mur4 SINE Alu -6 142 4 3 909 353 238 8 0 chr15 42523570 42523692 -60971282 + (TATG)n Simple_repeat Simple_repeat 4 126 0 3 909 240 325 0 0 chr15 42523695 42523775 -60971199 + (TG)n Simple_repeat Simple_repeat 1 80 0 3 909 543 331 63 0 chr15 42523775 42523917 -60971057 - RSINE1 SINE B4 0 165 15 3 909 211 344 0 0 chr15 42525985 42526049 -60968925 + CT-rich Low_complexity Low_complexity 2 65 0 3 909 508 103 0 0 chr15 42526914 42526982 -60967992 + B1_Mus1 SINE Alu 2 69 -79 4 909 225 151 0 0 chr15 42526998 42527051 -60967923 + CT-rich Low_complexity Low_complexity 2 54 0 4 909 198 0 0 0 chr15 42527079 42527101 -60967873 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 4 909 4246 66 20 0 chr15 42527119 42527665 -60967309 - L1_Mus3 LINE L1 -12 6626 6070 4 909 855 276 68 14 chr15 42527714 42527934 -60967040 - B4A SINE B4 -60 232 1 4 909 823 304 35 59 chr15 42528149 42528439 -60966535 + B4A SINE B4 10 292 0 4 909 222 116 0 0 chr15 42528439 42528482 -60966492 + (GA)n Simple_repeat Simple_repeat 1 43 0 4 909 240 313 26 17 chr15 42529903 42530020 -60964954 - MER103 DNA DNA -3 163 46 4 909 414 302 58 12 chr15 42530031 42530193 -60964781 + MLT1A0 LTR MaLR 6 170 -238 4 909 308 227 8 0 chr15 42530370 42530489 -60964485 + GA-rich Low_complexity Low_complexity 4 123 0 4 909 206 348 97 69 chr15 42530843 42531133 -60963841 + L2c LINE L2 2915 3212 -175 5 909 215 240 0 0 chr15 42532465 42532515 -60962459 + L3 LINE CR1 4435 4484 -5 5 909 195 330 199 5 chr15 42533762 42533948 -60961026 + MIRb SINE MIR 25 246 -22 5 909 378 236 38 6 chr15 42534620 42534778 -60960196 + (TA)n Simple_repeat Simple_repeat 2 164 0 5 909 21 89 0 0 chr15 42537283 42537339 -60957635 + AT_rich Low_complexity Low_complexity 1 56 0 5 909 346 298 29 0 chr15 42537340 42537444 -60957530 - PB1D10 SINE Alu -10 107 1 5 909 327 294 133 10 chr15 42537734 42537930 -60957044 + MER33 DNA MER1_type 27 246 -78 5 909 264 281 110 40 chr15 42538801 42538901 -60956073 + MLT1A0 LTR MaLR 3 109 -281 5 909 189 195 0 0 chr15 42538949 42538990 -60955984 + CT-rich Low_complexity Low_complexity 2 42 0 5 909 301 274 61 23 chr15 42538995 42539126 -60955848 + MLT1A0 LTR MaLR 228 363 -2 5 909 318 304 58 75 chr15 42539475 42539649 -60955325 + MLT2F LTR ERVL 493 663 0 5 909 1014 295 40 80 chr15 42540110 42540534 -60954440 - MTE2a LTR MaLR -3 416 1 6 909 509 310 105 30 chr15 42540979 42541245 -60953729 - B4A SINE B4 -6 286 1 6 909 451 264 73 0 chr15 42541500 42541610 -60953364 - B3A SINE B2 -38 160 43 6 909 1488 283 25 22 chr15 42541613 42542057 -60952917 + Lx6 LINE L1 6989 7433 -27 6 909 846 294 118 0 chr15 42542260 42542515 -60952459 - B4A SINE B4 -4 288 4 6 909 594 300 42 24 chr15 42543354 42543566 -60951408 + B3 SINE B2 1 216 0 6 909 300 27 0 0 chr15 42547056 42547093 -60947881 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 909 232 308 67 0 chr15 42547157 42547261 -60947713 - MLT1H1 LTR MaLR -28 527 417 6 909 291 353 145 28 chr15 42547275 42547594 -60947380 - MLT1H1 LTR MaLR -179 376 19 6 909 3372 3 0 0 chr15 42547594 42547968 -60947006 + L1Md_A LINE L1 6209 6582 0 6 909 445 351 143 36 chr15 42549065 42549316 -60945658 - B4A SINE B4 0 292 15 6 909 228 278 153 10 chr15 42550507 42550605 -60944369 + L4 LINE RTE 1701 1812 -217 7 909 280 291 91 75 chr15 42550659 42550845 -60944129 + MIR SINE MIR 33 221 -41 7 909 399 303 18 0 chr15 42551223 42551332 -60943642 - PB1D7 SINE Alu 0 120 10 7 909 309 333 18 44 chr15 42551734 42551847 -60943127 - PB1 SINE Alu -17 110 1 7 909 402 21 0 0 chr15 42551986 42552033 -60942941 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 909 363 198 65 75 chr15 42552235 42552328 -60942646 + PB1D10 SINE Alu 12 103 -17 7 909 657 103 17 17 chr15 42552328 42552446 -60942528 + (GGAA)n Simple_repeat Simple_repeat 4 121 0 7 909 270 73 0 0 chr15 42552712 42552753 -60942221 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 909 303 71 0 0 chr15 42552753 42552795 -60942179 + (GA)n Simple_repeat Simple_repeat 2 43 0 7 909 249 321 0 13 chr15 42552932 42553009 -60941965 - ID4 SINE ID -5 78 2 7 909 278 265 8 157 chr15 42553019 42553140 -60941834 - PB1 SINE Alu -2 125 23 8 909 432 0 0 0 chr15 42553247 42553295 -60941679 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 909 495 0 0 0 chr15 42553295 42553349 -60941625 + (GA)n Simple_repeat Simple_repeat 2 56 0 8 909 514 43 0 0 chr15 42554060 42554129 -60940845 - L1_Mus2 LINE L1 -5 6561 6493 8 909 451 237 104 30 chr15 42555190 42555325 -60939649 - B1_Mur1 SINE Alu 0 149 5 8 909 13483 152 19 3 chr15 42555340 42557329 -60937645 - Lx LINE L1 -6 6648 4622 8 909 230 0 33 0 chr15 42557320 42557350 -60937624 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 909 13483 194 35 56 chr15 42557350 42561105 -60933869 - Lx LINE L1 -1246 4637 1082 8 909 2879 136 65 4 chr15 42561106 42561586 -60933388 - Lx LINE L1 -5453 1204 696 8 909 285 128 0 0 chr15 42561702 42561749 -60933225 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 8 909 333 310 63 6 chr15 42562295 42562454 -60932520 - MER121 Unknown Unknown -212 200 33 8 909 380 214 23 0 chr15 42562693 42562866 -60932108 + (TA)n Simple_repeat Simple_repeat 2 178 0 8 909 288 0 0 0 chr15 42562867 42562899 -60932075 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 909 321 68 0 0 chr15 42562899 42562943 -60932031 + (GA)n Simple_repeat Simple_repeat 2 45 0 9 909 450 0 0 0 chr15 42563319 42563369 -60931605 + (TG)n Simple_repeat Simple_repeat 2 51 0 9 909 414 0 0 0 chr15 42563721 42563767 -60931207 + (CA)n Simple_repeat Simple_repeat 2 47 0 9 909 185 154 39 0 chr15 42563768 42563820 -60931154 + (CAGAGA)n Simple_repeat Simple_repeat 1 54 0 9 909 299 282 8 64 chr15 42564913 42565038 -60929936 + MER121 Unknown Unknown 117 234 -178 9 909 22 56 0 0 chr15 42565050 42565086 -60929888 + AT_rich Low_complexity Low_complexity 1 36 0 9 909 360 0 0 0 chr15 42566009 42566049 -60928925 + (TC)n Simple_repeat Simple_repeat 2 41 0 9 909 17840 68 6 2 chr15 42566669 42569026 -60925948 + L1Md_F2 LINE L1 3221 5586 -297 9 909 7929 49 4 7 chr15 42569027 42570024 -60924950 + L1Md_F2 LINE L1 5588 6581 -1 9 909 1048 75 0 33 chr15 42570104 42570255 -60924719 + B1_Mus1 SINE Alu 3 148 0 9 909 2350 151 5 21 chr15 42570280 42570712 -60924262 - Lx2 LINE L1 -16 6981 6557 1 909 365 58 0 19 chr15 42571406 42571459 -60923515 + (TAA)n Simple_repeat Simple_repeat 1 52 0 1 909 25 31 0 0 chr15 42572071 42572103 -60922871 + AT_rich Low_complexity Low_complexity 1 32 0 1 909 418 333 111 12 chr15 42572289 42572541 -60922433 - L1M4 LINE L1 -1333 4813 4537 1 909 25 0 0 0 chr15 42573836 42573861 -60921113 + AT_rich Low_complexity Low_complexity 1 25 0 1 909 21 57 0 0 chr15 42574150 42574185 -60920789 + AT_rich Low_complexity Low_complexity 1 35 0 1 909 186 273 60 15 chr15 42575052 42575119 -60919855 - L3b LINE CR1 -232 250 181 1 909 369 174 20 10 chr15 42575498 42575597 -60919377 + CT-rich Low_complexity Low_complexity 3 102 0 1 909 291 258 106 11 chr15 42575601 42575695 -60919279 - B1F SINE Alu -41 108 6 1 909 267 216 16 16 chr15 42576049 42576123 -60918851 - ID4_ SINE ID -1 82 9 1 909 356 282 92 92 chr15 42576347 42576464 -60918510 - ID_B1 SINE B4 -16 208 99 1 909 456 67 0 0 chr15 42576464 42576524 -60918450 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 909 356 282 92 92 chr15 42576524 42576613 -60918361 - ID_B1 SINE B4 -126 98 3 1 909 974 230 127 0 chr15 42577270 42577600 -60917374 + L1_Mur3 LINE L1 809 1180 -6548 1 909 1661 262 64 52 chr15 42577652 42578351 -60916623 + RMER1A Other Other 292 1064 -2 1 909 684 145 0 0 chr15 42578351 42578468 -60916506 + (GAAA)n Simple_repeat Simple_repeat 1 117 0 1 909 2523 200 41 19 chr15 42578469 42579159 -60915815 + L1_Mur3 LINE L1 1152 1863 -4014 1 909 563 169 25 43 chr15 42579159 42579329 -60915645 - ORR1A1 LTR MaLR 0 394 230 1 909 1486 23 0 0 chr15 42579330 42579501 -60915473 + L1Md_F3 LINE L1 5972 6142 -442 1 909 2262 58 38 10 chr15 42579501 42579862 -60915112 + L1Md_F3 LINE L1 6263 6584 0 1 909 2144 87 0 0 chr15 42579862 42580151 -60914823 - ORR1A1 LTR MaLR -57 289 1 1 909 2510 207 27 16 chr15 42580159 42580723 -60914251 + L1_Mur3 LINE L1 1877 2446 -3431 1 909 8477 25 4 0 chr15 42580726 42582014 -60912960 - L1Md_A LINE L1 0 6582 5290 1 909 12204 16 1 0 chr15 42582005 42583418 -60911556 + L1Md_A LINE L1 3859 5272 -611 1 909 2551 189 40 4 chr15 42583415 42583947 -60911027 + L1_Mur3 LINE L1 2431 2981 -2896 1 909 2703 200 18 2 chr15 42583950 42584506 -60910468 + L1_Mur3 LINE L1 4520 5084 -793 1 909 1732 330 59 99 chr15 42584508 42585337 -60909637 + Lx5 LINE L1 6132 6959 -91 1 909 222 284 14 29 chr15 42585405 42585474 -60909500 - PB1D10 SINE Alu -2 115 48 1 909 271 277 0 15 chr15 42585418 42585484 -60909490 - ID_B1 SINE B4 -41 183 119 1 909 389 323 38 58 chr15 42585649 42585889 -60909085 - MER121 Unknown Unknown -62 350 116 1 909 284 324 0 0 chr15 42586555 42586623 -60908351 + B1_Mur1 SINE Alu 76 143 -6 1 909 24 0 0 0 chr15 42586639 42586663 -60908311 + AT_rich Low_complexity Low_complexity 1 24 0 1 909 21 82 0 0 chr15 42586930 42586979 -60907995 + AT_rich Low_complexity Low_complexity 1 49 0 1 909 2369 203 39 52 chr15 42587106 42587668 -60907306 + RLTR31_Mm LTR ERVK 7 561 0 1 909 1133 101 0 0 chr15 42587713 42587861 -60907113 + B1_Mus1 SINE Alu 1 148 0 1 909 1583 204 79 70 chr15 42588976 42589686 -60905288 - RMER6A LTR ERVK -4 716 3 1 909 474 289 41 65 chr15 42590052 42590331 -60904643 + MLT1D LTR MaLR 109 440 -65 1 909 1274 203 83 44 chr15 42590920 42591116 -60903858 - ORR1D1 LTR MaLR 0 374 182 1 909 594 0 0 0 chr15 42591116 42591182 -60903792 + (GA)n Simple_repeat Simple_repeat 1 66 0 1 909 1274 203 83 44 chr15 42591182 42591345 -60903629 - ORR1D1 LTR MaLR -193 181 2 1 909 308 317 113 21 chr15 42591391 42591533 -60903441 + HAL1-3A_ME LINE L1 2284 2438 -420 1 909 231 274 34 56 chr15 42591698 42591787 -60903187 + LTR48B LTR ERV1 1 87 -557 1 909 594 87 19 10 chr15 42592222 42592326 -60902648 + (TAGA)n Simple_repeat Simple_repeat 1 105 0 1 909 333 253 13 0 chr15 42592428 42592503 -60902471 - ID4_ SINE ID -5 78 3 1 909 22 0 0 0 chr15 42592527 42592549 -60902425 + AT_rich Low_complexity Low_complexity 1 22 0 1 909 1729 144 51 60 chr15 42593664 42593996 -60900978 + ORR1A4 LTR MaLR 1 329 0 1 909 26 0 0 0 chr15 42594128 42594154 -60900820 + AT_rich Low_complexity Low_complexity 1 26 0 1 909 561 373 31 35 chr15 42594453 42594714 -60900260 - B4A SINE B4 0 292 33 1 909 264 137 0 0 chr15 42594873 42594924 -60900050 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 909 1906 188 35 68 chr15 42595348 42595564 -60899410 + RMER1B Other Other 648 870 -196 1 909 2090 186 97 28 chr15 42595564 42596110 -60898864 + RLTR31A_Mm LTR ERVK 1 584 0 1 909 1906 188 35 68 chr15 42596110 42596322 -60898652 + RMER1B Other Other 871 1062 -4 1 909 450 0 0 0 chr15 42597151 42597201 -60897773 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 909 301 306 19 110 chr15 42597266 42597420 -60897554 - B1F1 SINE Alu -9 140 1 1 909 1467 248 147 13 chr15 42597446 42597895 -60897079 - RLTR11A2 LTR ERVK 0 527 19 1 909 608 227 84 0 chr15 42597924 42598078 -60896896 + RLTR11A2 LTR ERVK 7 173 -354 1 113 720 262 66 36 chr15 42598104 42598405 -60896569 - RLTR11B LTR ERVK -139 314 5 1 910 242 95 0 23 chr15 42599466 42599509 -60895465 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 910 215 294 69 53 chr15 42601021 42601206 -60893768 - L2c LINE L2 -3 3423 3211 1 910 322 278 162 49 chr15 42601228 42601432 -60893542 + L1M2 LINE L1 4781 5007 -1136 1 910 573 315 100 26 chr15 42601781 42602162 -60892812 + L1_Mur3 LINE L1 5382 5790 -90 1 910 270 0 0 0 chr15 42602238 42602268 -60892706 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 910 1447 128 69 15 chr15 42602404 42602666 -60892308 + Lx2A1 LINE L1 6733 7008 0 1 910 323 173 9 0 chr15 42603151 42603261 -60891713 + (TA)n Simple_repeat Simple_repeat 2 112 0 1 910 699 237 84 11 chr15 42603263 42603442 -60891532 - Lx6 LINE L1 -28 7432 7241 1 910 380 295 81 35 chr15 42603450 42603647 -60891327 - MLT1D LTR MaLR -269 236 31 1 910 297 0 0 0 chr15 42603943 42603976 -60890998 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 910 405 0 0 0 chr15 42603976 42604020 -60890954 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 910 1169 278 33 25 chr15 42604226 42604591 -60890383 + ORR1D2 LTR MaLR 3 370 0 1 910 243 336 93 0 chr15 42604727 42604834 -60890140 + PB1D10 SINE Alu 1 117 0 1 910 315 0 0 0 chr15 42606154 42606189 -60888785 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 910 354 45 0 0 chr15 42606901 42606945 -60888029 + (CAGA)n Simple_repeat Simple_repeat 1 44 0 1 910 25 0 0 0 chr15 42608240 42608265 -60886709 + AT_rich Low_complexity Low_complexity 1 25 0 1 910 212 171 0 0 chr15 42608296 42608351 -60886623 + A-rich Low_complexity Low_complexity 1 55 0 1 910 289 248 57 113 chr15 42608376 42608535 -60886439 + L1ME1 LINE L1 4635 4784 -1362 1 910 832 326 82 30 chr15 42610020 42611019 -60883955 + L1ME1 LINE L1 5060 6103 -75 1 910 243 192 72 60 chr15 42612404 42612487 -60882487 - Lx8 LINE L1 -5 7468 7385 1 910 1449 290 70 35 chr15 42612598 42613116 -60881858 + Lx8 LINE L1 6733 7268 -205 1 910 263 250 127 18 chr15 42613116 42613226 -60881748 - MER106B DNA MER1_type -43 1016 895 1 910 210 150 0 0 chr15 42613729 42613769 -60881205 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 910 1668 211 51 0 chr15 42613923 42614279 -60880695 + ORR1D1 LTR MaLR 1 374 0 1 910 38 68 0 0 chr15 42614363 42614436 -60880538 + AT_rich Low_complexity Low_complexity 1 73 0 1 910 232 302 73 32 chr15 42614674 42614797 -60880177 - MER58C DNA MER1_type -23 192 65 1 910 2798 75 28 8 chr15 42616393 42616783 -60878191 + MTB LTR MaLR 1 398 -2 1 910 2214 179 8 3 chr15 42617137 42617513 -60877461 - ORR1C1 LTR MaLR 0 378 1 1 910 23 54 0 0 chr15 42618992 42619029 -60875945 + AT_rich Low_complexity Low_complexity 1 37 0 1 910 505 336 88 62 chr15 42620003 42620311 -60874663 + ORR1E LTR MaLR 10 325 -34 1 910 191 252 140 10 chr15 42621464 42621564 -60873410 - MIR SINE MIR -9 253 141 1 910 216 396 30 20 chr15 42622513 42622714 -60872260 - L2 LINE L2 -715 2704 2502 1 910 359 100 0 14 chr15 42622719 42622790 -60872184 + (CAAAA)n Simple_repeat Simple_repeat 1 70 0 1 910 2066 233 21 10 chr15 42623653 42624135 -60870839 + RLTR16 LTR ERVK 1 487 -18 1 910 678 329 73 41 chr15 42624314 42624628 -60870346 + ORR1E LTR MaLR 3 326 -33 1 910 32699 78 4 13 chr15 42624776 42628701 -60866273 + L1Md_F2 LINE L1 625 4533 -1350 1 910 7324 41 0 23 chr15 42628701 42629627 -60865347 + L1Md_F2 LINE L1 5676 6580 -2 1 910 32699 67 3 9 chr15 42629627 42630711 -60864263 + L1Md_F2 LINE L1 4534 5586 -297 1 910 7616 65 1 19 chr15 42630711 42631722 -60863252 + L1Md_F2 LINE L1 5587 6579 -3 1 910 326 181 12 0 chr15 42631726 42631809 -60863165 + L1_Mur1 LINE L1 2324 2407 -3479 1 910 875 253 129 30 chr15 42632030 42632425 -60862549 + MER57C2 LTR ERV1 1 434 0 1 910 525 289 49 19 chr15 42633064 42633269 -60861705 - B3 SINE B2 0 216 6 1 910 659 330 0 55 chr15 42633381 42633599 -60861375 + B4A SINE B4 1 206 -86 1 910 492 48 0 0 chr15 42635203 42635266 -60859708 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 910 487 369 99 33 chr15 42635554 42635980 -60858994 + MLT1G1 LTR MaLR 16 469 -110 1 910 457 303 16 11 chr15 42636001 42636191 -60858783 + L1VL4 LINE L1 254 444 -5858 1 910 2088 76 0 0 chr15 42636188 42636465 -60858509 + L1_Mus3 LINE L1 4255 4531 -1352 1 910 2495 24 7 0 chr15 42636457 42636748 -60858226 - L1Md_T LINE L1 -239 6343 6051 1 910 1958 34 4 0 chr15 42636748 42636986 -60857988 + L1Md_A LINE L1 6339 6577 -5 1 910 7227 156 54 5 chr15 42637000 42637695 -60857279 + L1_Mus3 LINE L1 4519 5231 -652 1 910 387 0 0 0 chr15 42637695 42637738 -60857236 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 910 7273 113 32 2 chr15 42637738 42639073 -60855901 + L1_Mus3 LINE L1 5232 6638 0 1 910 243 294 127 60 chr15 42639344 42639478 -60855496 - MLT1C LTR MaLR -285 182 40 1 910 207 232 112 34 chr15 42641033 42641122 -60853852 - MIRb SINE MIR -64 204 109 1 910 465 238 85 9 chr15 42641575 42641681 -60853293 - RSINE1 SINE B4 -35 130 17 1 910 393 22 0 0 chr15 42641699 42641745 -60853229 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 910 450 291 141 33 chr15 42641913 42642219 -60852755 - MER110A LTR ERV1 0 468 130 1 910 921 311 28 83 chr15 42642404 42642803 -60852171 + MTE2a LTR MaLR 3 379 0 1 910 399 319 62 118 chr15 42642981 42643139 -60851835 + ORR1E LTR MaLR 3 145 -214 2 910 2637 43 0 3 chr15 42643139 42643468 -60851506 - L1Md_A LINE L1 0 6582 6255 2 910 255 319 63 120 chr15 42643468 42643629 -60851345 + ORR1E LTR MaLR 143 304 -70 2 910 319 317 62 52 chr15 42644395 42644588 -60850386 + MER57D LTR ERV1 163 357 -54 2 910 1094 75 0 14 chr15 42644591 42644730 -60850244 + B1_Mm SINE Alu 1 138 -9 2 910 369 0 0 0 chr15 42644730 42644771 -60850203 + (CAAAA)n Simple_repeat Simple_repeat 4 44 0 2 910 286 340 20 20 chr15 42645937 42646036 -60848938 - MLT1K LTR MaLR -360 235 137 2 910 237 316 73 3 chr15 42647465 42647620 -60847354 - MIR SINE MIR 0 268 90 2 910 510 295 78 53 chr15 42647650 42648077 -60846897 + RLTR12B LTR ERVK 47 517 -11 2 910 1165 252 56 56 chr15 42648294 42648458 -60846516 + ORR1D1 LTR MaLR 1 174 -200 2 910 498 46 0 0 chr15 42648458 42648523 -60846451 + (TG)n Simple_repeat Simple_repeat 2 66 0 2 910 1165 252 56 56 chr15 42648523 42648732 -60846242 + ORR1D1 LTR MaLR 175 374 0 2 910 288 261 137 7 chr15 42648825 42648964 -60846010 - L1M3 LINE L1 -364 5819 5663 2 910 248 333 105 38 chr15 42649075 42649284 -60845690 - ORR1D2 LTR MaLR -140 230 8 2 910 335 290 0 45 chr15 42649286 42649398 -60845576 - L1M3 LINE L1 -570 5613 5507 2 910 4089 253 51 12 chr15 42649546 42650539 -60844435 + Lx5 LINE L1 6008 7039 -11 2 910 1920 126 111 31 chr15 42650877 42651237 -60843737 + MTA_Mm LTR MaLR 1 389 -7 2 910 189 74 0 0 chr15 42651613 42651640 -60843334 + (T)n Simple_repeat Simple_repeat 1 27 0 2 910 8772 11 0 0 chr15 42651689 42653153 -60841821 - L1Md_A LINE L1 -2 6580 5117 2 910 343 125 0 0 chr15 42653500 42653548 -60841426 + L1_Mus2 LINE L1 6178 6225 -341 2 910 285 329 57 73 chr15 42653596 42653773 -60841201 + MIRb SINE MIR 74 247 -21 2 910 423 0 0 0 chr15 42654572 42654619 -60840355 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 910 231 43 0 21 chr15 42655298 42655345 -60839629 - L1Md_F2 LINE L1 -1 6581 6536 2 910 8565 24 0 0 chr15 42655346 42656552 -60838422 - L1Md_T LINE L1 0 6582 5377 2 910 2920 71 3 0 chr15 42656550 42656931 -60838043 - L1Md_F2 LINE L1 -29 6553 6172 2 910 837 30 0 0 chr15 42657967 42658067 -60836907 + (CATATA)n Simple_repeat Simple_repeat 2 101 0 2 910 9032 102 26 8 chr15 42658140 42659524 -60835450 + Lx3A LINE L1 5555 6966 -15 2 910 189 74 0 0 chr15 42659524 42659551 -60835423 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2 910 378 0 0 0 chr15 42662665 42662707 -60832267 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2 910 237 239 99 56 chr15 42662768 42662839 -60832135 - MIRc SINE MIR -107 161 88 2 910 1139 79 12 12 chr15 42662870 42663036 -60831938 - B2_Mm1t SINE B2 0 193 28 2 910 522 324 32 12 chr15 42663554 42663804 -60831170 + L1ME1 LINE L1 5651 5905 -274 2 910 393 279 40 11 chr15 42663830 42664007 -60830967 + L1ME1 LINE L1 5992 6330 -4 2 910 22 35 0 0 chr15 42664411 42664440 -60830534 + AT_rich Low_complexity Low_complexity 1 29 0 2 910 564 56 0 0 chr15 42664536 42664608 -60830366 + (TCTA)n Simple_repeat Simple_repeat 4 75 0 2 910 193 343 29 0 chr15 42665044 42665114 -60829860 - MIRb SINE MIR -40 228 157 2 910 24 32 0 0 chr15 42665360 42665391 -60829583 + AT_rich Low_complexity Low_complexity 1 31 0 2 910 522 0 0 0 chr15 42666226 42666284 -60828690 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 910 684 262 27 20 chr15 42666293 42666441 -60828533 - B3A SINE B2 -47 151 3 2 910 227 312 62 0 chr15 42668729 42668809 -60826165 + L2a LINE L2 3338 3422 -4 2 910 234 327 9 0 chr15 42670550 42670657 -60824317 - L1M4 LINE L1 -3821 2824 2717 2 910 224 214 0 35 chr15 42670693 42670751 -60824223 + T-rich Low_complexity Low_complexity 1 56 0 2 910 224 271 71 0 chr15 42671477 42671547 -60823427 - ID4 SINE ID -3 80 6 2 910 270 247 165 15 chr15 42671548 42671643 -60823331 - PB1D10 SINE Alu -1 126 9 2 910 286 277 19 19 chr15 42672367 42672470 -60822504 + CT-rich Low_complexity Low_complexity 2 104 0 2 910 479 364 83 64 chr15 42672646 42673128 -60821846 - L1M4 LINE L1 -5948 594 104 2 910 438 255 78 78 chr15 42673860 42674013 -60820961 + MER21B LTR ERV1 661 813 -50 2 910 438 20 0 0 chr15 42674914 42674965 -60820009 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 910 435 19 0 0 chr15 42674965 42675016 -60819958 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 910 259 318 0 66 chr15 42676169 42676260 -60818714 + RMER15 LTR ERVL 337 421 -154 2 910 341 365 103 7 chr15 42677242 42677388 -60817586 + LTR33 LTR ERVL 113 272 -243 2 910 474 18 0 0 chr15 42677403 42677458 -60817516 + (TGG)n Simple_repeat Simple_repeat 2 56 0 2 910 669 213 0 0 chr15 42677478 42677642 -60817332 + GA-rich Low_complexity Low_complexity 2 165 0 2 910 634 321 92 57 chr15 42677970 42678251 -60816723 - B4 SINE B4 0 292 2 2 910 298 399 4 68 chr15 42679350 42679584 -60815390 + MLT1J LTR MaLR 70 288 -224 2 910 681 13 0 0 chr15 42681002 42681080 -60813894 + (GAAA)n Simple_repeat Simple_repeat 2 79 0 2 910 1017 348 16 25 chr15 42681095 42681608 -60813366 - Lx8 LINE L1 -113 7360 6853 2 910 605 335 94 0 chr15 42683707 42683910 -60811064 - ID_B1 SINE B4 0 224 3 2 910 3524 121 21 0 chr15 42684284 42685319 -60809655 + L1_Mur1 LINE L1 651 1709 -4177 2 910 2697 62 84 0 chr15 42685328 42685686 -60809288 - RLTR10 LTR ERVK -2 388 1 2 910 7844 91 37 51 chr15 42685686 42687011 -60807963 + L1_Mur1 LINE L1 4581 5886 0 2 910 887 92 131 0 chr15 42687019 42687149 -60807825 + B1_Mus1 SINE Alu 2 148 0 2 910 348 130 0 0 chr15 42687150 42687219 -60807755 + (CAAAA)n Simple_repeat Simple_repeat 2 70 0 2 910 476 0 34 0 chr15 42687844 42687903 -60807071 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 2 910 238 224 12 12 chr15 42687906 42687992 -60806982 + (TA)n Simple_repeat Simple_repeat 2 87 0 2 910 301 333 30 38 chr15 42688652 42688783 -60806191 - RMER15 LTR ERVL -66 509 380 2 910 1884 50 13 0 chr15 42688935 42689174 -60805800 + L1Md_F2 LINE L1 6339 6580 -2 2 910 559 298 41 23 chr15 42689817 42689996 -60804978 - MLT1B LTR MaLR -10 364 193 2 910 385 208 10 62 chr15 42690096 42690198 -60804776 + MTC LTR MaLR 1 94 -327 2 910 2432 209 52 14 chr15 42690198 42690761 -60804213 + Lx5 LINE L1 6463 7046 -4 2 910 1763 203 24 12 chr15 42690774 42691108 -60803866 + MTC LTR MaLR 84 421 0 2 910 4867 204 30 12 chr15 42691258 42692910 -60802064 + Lx6 LINE L1 4848 6542 -918 2 910 639 286 0 0 chr15 42692929 42693104 -60801870 - Lx6 LINE L1 -40 7420 7246 2 910 1441 230 72 133 chr15 42693127 42693720 -60801254 + Lx6 LINE L1 6587 7143 -317 2 910 558 175 192 20 chr15 42693724 42693870 -60801104 - B2_Mm2 SINE B2 -10 185 15 2 910 196 127 18 18 chr15 42693874 42693930 -60801044 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 2 910 1628 223 0 3 chr15 42693930 42694240 -60800734 + Lx6 LINE L1 7137 7445 -15 2 910 312 312 68 25 chr15 42694360 42694521 -60800453 - HAL1-3A_ME LINE L1 -413 2445 2278 2 910 322 298 0 12 chr15 42695426 42695511 -60799463 - MIR SINE MIR -89 173 90 2 910 293 308 101 64 chr15 42696167 42696358 -60798616 + MIR SINE MIR 63 258 -4 2 910 267 31 0 0 chr15 42696442 42696474 -60798500 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 2 910 5831 196 61 7 chr15 42696474 42698046 -60796928 - Lx4B LINE L1 -22 7036 5353 2 910 3972 126 99 14 chr15 42698046 42698700 -60796274 - Lx LINE L1 -1 6653 5944 2 910 2554 75 8 0 chr15 42698700 42699058 -60795916 + L1_Mus4 LINE L1 5621 5981 -655 2 910 1451 72 0 10 chr15 42699060 42699255 -60795719 - B2_Mm2 SINE B2 -2 193 1 2 910 2317 116 36 0 chr15 42699277 42699664 -60795310 - Lx4B LINE L1 -516 5361 4961 2 910 1049 132 17 27 chr15 42699668 42699858 -60795116 - ORR1A2-int LTR MaLR -1373 207 1 2 910 2046 109 21 59 chr15 42699858 42700198 -60794776 - ORR1A2 LTR MaLR 0 327 1 2 910 270 361 52 8 chr15 42700411 42700545 -60794429 + MER117 DNA MER1_type 41 180 -17 2 910 861 190 0 0 chr15 42701126 42701305 -60793669 + CT-rich Low_complexity Low_complexity 2 180 0 2 910 5040 64 0 0 chr15 42701308 42701934 -60793040 - L1_Mus1 LINE L1 -1 6566 5941 2 910 3727 64 2 0 chr15 42701938 42702497 -60792477 + L1_Mus1 LINE L1 5345 5905 -662 2 910 22 0 0 0 chr15 42702624 42702646 -60792328 + AT_rich Low_complexity Low_complexity 1 22 0 2 910 424 299 36 65 chr15 42702651 42702819 -60792155 - RSINE1 SINE B4 0 165 3 2 910 248 302 16 57 chr15 42705122 42705245 -60789729 - MIR SINE MIR -17 245 128 2 910 300 306 0 27 chr15 42705263 42705337 -60789637 + ID SINE ID 1 72 -152 2 910 378 0 0 0 chr15 42705344 42705386 -60789588 + (GGAA)n Simple_repeat Simple_repeat 2 43 0 2 910 2276 101 3 12 chr15 42707240 42707570 -60787404 - MTB_Mm LTR MaLR -78 329 3 2 910 2487 165 61 35 chr15 42707572 42708111 -60786863 - MTB_Mm-int LTR MaLR 0 1098 546 2 910 1088 82 7 0 chr15 42708123 42708270 -60786704 + B1_Mus1 SINE Alu 1 148 0 2 910 202 65 20 80 chr15 42708272 42708322 -60786652 + A-rich Low_complexity Low_complexity 2 48 0 2 910 36838 9 0 1 chr15 42708402 42714379 -60780595 + L1Md_A LINE L1 1 5586 -297 2 910 9060 3 0 0 chr15 42714379 42715375 -60779599 + L1Md_A LINE L1 5587 6582 0 2 910 4948 71 30 0 chr15 42715510 42716172 -60778802 - L1_Mus1 LINE L1 0 6567 5886 2 910 462 18 0 0 chr15 42717147 42717202 -60777772 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 910 356 125 0 15 chr15 42717447 42717471 -60777503 + (TA)n Simple_repeat Simple_repeat 1 24 0 2 910 480 111 0 0 chr15 42717471 42717543 -60777431 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 910 356 125 0 15 chr15 42717543 42717583 -60777391 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 910 293 410 14 7 chr15 42717941 42718081 -60776893 + ID_B1 SINE B4 80 220 -4 2 910 21 0 0 0 chr15 42718328 42718349 -60776625 + AT_rich Low_complexity Low_complexity 1 21 0 2 910 508 218 107 12 chr15 42718990 42719146 -60775828 - Lx9 LINE L1 -1676 5968 5749 2 910 270 0 0 0 chr15 42719146 42719176 -60775798 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2 910 508 162 45 9 chr15 42719176 42719218 -60775756 - Lx9 LINE L1 -99 5748 5707 2 910 3928 163 93 28 chr15 42719226 42720063 -60774911 + RMER17B LTR ERVK 2 893 -65 2 910 1226 122 23 18 chr15 42720063 42720280 -60774694 + L1_Mus3 LINE L1 6419 6636 -2 2 910 695 255 94 31 chr15 42720292 42720579 -60774395 - L1_Rod LINE L1 -481 5366 5062 2 910 465 19 0 0 chr15 42720642 42720696 -60774278 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 910 466 361 71 0 chr15 42720708 42720960 -60774014 + Lx9 LINE L1 6362 6631 -1013 3 910 272 258 16 0 chr15 42720960 42721022 -60773952 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 910 189 0 0 0 chr15 42722508 42722529 -60772445 + (A)n Simple_repeat Simple_repeat 1 21 0 3 910 958 292 26 30 chr15 42722921 42723189 -60771785 + B4A SINE B4 4 270 -22 3 910 27 62 0 0 chr15 42723236 42723284 -60771690 + AT_rich Low_complexity Low_complexity 1 48 0 3 910 502 350 0 0 chr15 42723384 42723527 -60771447 - RSINE1 SINE B4 -21 144 2 3 910 270 287 8 16 chr15 42723560 42723591 -60771383 + polypyrimidine Low_complexity Low_complexity 94 124 0 3 910 1284 89 0 0 chr15 42723591 42723771 -60771203 + (TTC)n Simple_repeat Simple_repeat 1 180 0 3 910 270 287 8 16 chr15 42723771 42723782 -60771192 + polypyrimidine Low_complexity Low_complexity 83 93 0 3 910 1226 85 0 6 chr15 42723782 42723960 -60771014 + (TTC)n Simple_repeat Simple_repeat 2 178 0 3 910 270 287 8 16 chr15 42723960 42724040 -60770934 + CT-rich Low_complexity Low_complexity 4 82 0 3 910 339 25 0 0 chr15 42724130 42724170 -60770804 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 910 456 86 0 0 chr15 42724170 42724239 -60770735 + (CA)n Simple_repeat Simple_repeat 1 70 0 3 910 2166 260 109 71 chr15 42725069 42726077 -60768897 + Lx6 LINE L1 6184 7458 -2 3 910 218 220 17 0 chr15 42726077 42726136 -60768838 + GA-rich Low_complexity Low_complexity 1 60 0 3 910 578 331 69 61 chr15 42726145 42726508 -60768466 + ORR1D2 LTR MaLR 5 370 0 3 910 370 259 25 25 chr15 42726712 42726831 -60768143 + MLT1B LTR MaLR 1 119 -271 3 910 457 175 21 0 chr15 42726833 42726930 -60768044 + Lx9 LINE L1 7538 7636 -8 3 910 218 302 0 0 chr15 42726951 42727004 -60767970 + PB1D10 SINE Alu 65 117 0 3 910 229 237 36 95 chr15 42727138 42727222 -60767752 - L2a LINE L2 -3 3423 3345 3 910 1897 95 11 7 chr15 42727408 42727683 -60767291 - L1_Mus1 LINE L1 0 6567 6292 3 910 4183 67 24 0 chr15 42727683 42728266 -60766708 + L1Md_F2 LINE L1 5704 6300 -282 3 910 585 329 52 25 chr15 42728421 42728745 -60766229 + MLT1B LTR MaLR 50 382 -8 3 910 26 50 0 0 chr15 42729298 42729338 -60765636 + AT_rich Low_complexity Low_complexity 1 40 0 3 113 216 86 0 0 chr15 42729468 42729503 -60765471 + (A)n Simple_repeat Simple_repeat 1 35 0 3 911 273 140 0 0 chr15 42730149 42730206 -60764768 + (TAA)n Simple_repeat Simple_repeat 1 57 0 3 911 468 364 59 14 chr15 42730396 42730616 -60764358 - MIR SINE MIR -32 230 1 3 911 470 287 0 24 chr15 42730783 42730908 -60764066 - RSINE1 SINE B4 -39 126 5 3 911 313 296 93 31 chr15 42731499 42731628 -60763346 + ORR1E LTR MaLR 1 137 -222 3 911 1009 243 205 17 chr15 42731855 42732202 -60762772 - MTC LTR MaLR -1 420 9 3 911 324 188 0 0 chr15 42732623 42732687 -60762287 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 911 286 333 55 12 chr15 42732843 42733006 -60761968 + MIRc SINE MIR 76 255 -13 3 911 2094 246 118 10 chr15 42733254 42733873 -60761101 + Lx6 LINE L1 6747 7432 -28 3 911 31 0 0 0 chr15 42734574 42734605 -60760369 + AT_rich Low_complexity Low_complexity 1 31 0 3 911 262 245 105 117 chr15 42735174 42735345 -60759629 + ORR1E LTR MaLR 66 234 -125 3 911 236 280 49 20 chr15 42735398 42735500 -60759474 + ORR1E LTR MaLR 275 379 0 3 911 1038 184 32 14 chr15 42736117 42736338 -60758636 - URR1B DNA MER1_type 0 225 1 3 911 756 244 66 0 chr15 42736590 42736803 -60758171 - Lx5 LINE L1 -2 7048 6822 3 911 255 402 7 43 chr15 42737150 42737288 -60757686 + B4A SINE B4 158 290 -2 3 911 239 243 14 14 chr15 42737613 42737684 -60757290 - Lx7 LINE L1 -365 7331 7261 3 911 3266 232 75 12 chr15 42738205 42739009 -60755965 - Lx6 LINE L1 -12 7448 6595 3 911 331 320 39 15 chr15 42739579 42739709 -60755265 + B1F SINE Alu 10 142 -7 3 911 201 371 55 71 chr15 42739885 42740068 -60754906 + L2b LINE L2 3192 3371 -4 3 911 393 256 82 15 chr15 42741171 42741377 -60753597 - L1MB8 LINE L1 -15 6163 5944 3 911 397 302 54 8 chr15 42741378 42741508 -60753466 - B1F1 SINE Alu 0 149 14 3 911 5100 80 22 1 chr15 42742068 42742805 -60752169 - Lx3A LINE L1 -95 5791 5040 3 911 7978 102 25 15 chr15 42742806 42744007 -60750967 + Lx3A LINE L1 5767 6979 -2 3 911 719 319 45 35 chr15 42746327 42746616 -60748358 + B4A SINE B4 1 292 0 3 911 525 99 0 0 chr15 42746667 42746748 -60748226 + (GA)n Simple_repeat Simple_repeat 2 82 0 3 911 5861 118 33 25 chr15 42746791 42747427 -60747547 - RMER17B LTR ERVK -4 954 319 3 911 1128 66 0 0 chr15 42747427 42747564 -60747410 + B1_Mm SINE Alu 1 137 -10 3 911 737 31 0 10 chr15 42747564 42747661 -60747313 + (GAAA)n Simple_repeat Simple_repeat 2 97 0 3 911 5861 118 33 25 chr15 42747661 42747970 -60747004 - RMER17B LTR ERVK -640 318 2 3 911 9902 168 58 22 chr15 42747987 42750485 -60744489 + Lx6 LINE L1 3644 6175 -1285 3 911 609 14 0 0 chr15 42750485 42750555 -60744419 + (TA)n Simple_repeat Simple_repeat 2 71 0 3 911 5784 217 55 100 chr15 42750555 42751682 -60743292 + Lx6 LINE L1 6176 7287 -173 3 911 240 35 0 0 chr15 42751694 42751723 -60743251 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 3 911 231 284 0 0 chr15 42751761 42751828 -60743146 + Lx7 LINE L1 7189 7255 -441 3 911 237 33 0 0 chr15 42751855 42751885 -60743089 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 3 911 44 56 0 0 chr15 42752061 42752133 -60742841 + AT_rich Low_complexity Low_complexity 1 72 0 3 911 188 314 32 75 chr15 42754617 42754710 -60740264 + MIRb SINE MIR 115 203 -65 3 911 505 297 115 7 chr15 42754727 42755005 -60739969 + L1MB1 LINE L1 5744 6051 -138 3 911 748 290 60 82 chr15 42755205 42755415 -60739559 + L1MA6 LINE L1 5617 5813 -487 3 911 246 62 0 0 chr15 42755415 42755447 -60739527 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 911 748 290 60 82 chr15 42755447 42755467 -60739507 + L1MA6 LINE L1 5814 5820 -480 3 911 489 150 0 29 chr15 42755467 42755570 -60739404 - L1Md_F2 LINE L1 0 6582 6483 3 911 748 290 60 82 chr15 42755570 42755921 -60739053 + L1MA6 LINE L1 5821 6186 -114 3 911 704 103 9 0 chr15 42755951 42756067 -60738907 + (TA)n Simple_repeat Simple_repeat 2 118 0 3 911 227 247 78 0 chr15 42756136 42756213 -60738761 + L1MB1 LINE L1 6061 6143 -46 3 911 251 264 43 32 chr15 42756242 42756336 -60738638 + GA-rich Low_complexity Low_complexity 6 100 0 3 911 540 0 0 0 chr15 42756382 42756442 -60738532 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 911 10126 64 8 0 chr15 42756974 42758341 -60736633 - L1Md_F2 LINE L1 -282 5601 4224 3 911 8117 36 0 4 chr15 42758341 42759312 -60735662 + L1Md_F2 LINE L1 5616 6582 0 3 911 738 254 43 24 chr15 42759337 42759547 -60735427 + ID_B1 SINE B4 2 215 -9 3 911 1607 268 84 21 chr15 42759667 42760144 -60734830 + RLTR18B LTR ERVK 6 512 0 3 911 13269 23 1 0 chr15 42761189 42763495 -60731479 - L1Md_T LINE L1 -1 6584 4277 3 911 39504 5 0 0 chr15 42763491 42770067 -60724907 - L1Md_A LINE L1 0 6582 7 3 911 22917 50 2 5 chr15 42770068 42773912 -60721062 - L1Md_T LINE L1 -1598 4288 361 3 911 205 309 29 14 chr15 42773972 42774041 -60720933 + L2 LINE L2 2817 2886 -533 3 911 2499 190 6 8 chr15 42774072 42774550 -60720424 + Lx2B LINE L1 6506 6982 -18 3 911 542 302 83 17 chr15 42774579 42774685 -60720289 + Lx9 LINE L1 7236 7342 -302 3 911 450 0 0 0 chr15 42774685 42774735 -60720239 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 911 542 302 83 17 chr15 42774735 42774978 -60719996 + Lx9 LINE L1 7343 7607 -37 3 911 25 0 0 0 chr15 42775013 42775038 -60719936 + AT_rich Low_complexity Low_complexity 1 25 0 3 911 215 268 0 44 chr15 42775275 42775365 -60719609 + (TATATG)n Simple_repeat Simple_repeat 4 89 0 3 911 1335 111 0 5 chr15 42775941 42776131 -60718843 + B2_Mm2 SINE B2 1 189 -6 3 911 492 18 0 0 chr15 42776767 42776824 -60718150 + (GGAA)n Simple_repeat Simple_repeat 3 59 0 3 911 231 346 122 0 chr15 42777139 42777246 -60717728 - LTR16A LTR ERVL -235 216 97 3 911 222 37 0 0 chr15 42777357 42777384 -60717590 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 911 847 317 114 48 chr15 42777849 42778294 -60716680 + FordPrefect DNA Tip100 977 1445 -238 3 911 261 0 0 0 chr15 42778294 42778323 -60716651 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3 911 847 317 114 48 chr15 42778323 42778526 -60716448 + FordPrefect DNA Tip100 1446 1668 -15 3 911 446 347 69 32 chr15 42778644 42778891 -60716083 + B4A SINE B4 1 256 -36 3 911 537 16 0 0 chr15 42778932 42778994 -60715980 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 911 2541 77 118 11 chr15 42779076 42779456 -60715518 + BGLII LTR ERVK 1 421 0 3 911 190 402 0 59 chr15 42780798 42780917 -60714057 - L2 LINE L2 -557 2862 2751 3 911 279 79 0 0 chr15 42781517 42781555 -60713419 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 3 911 856 246 100 0 chr15 42781556 42781796 -60713178 + RMER19A LTR ERVK 474 737 0 3 911 1290 205 186 15 chr15 42781943 42782296 -60712678 - RMER19A LTR ERVK -345 392 1 3 911 690 270 30 10 chr15 42782367 42782565 -60712409 + B3 SINE B2 3 204 -12 3 911 30 0 0 0 chr15 42782574 42782604 -60712370 + AT_rich Low_complexity Low_complexity 1 30 0 3 911 995 265 90 33 chr15 42782812 42783144 -60711830 - MTE2b LTR MaLR -13 366 16 3 911 480 360 99 62 chr15 42784188 42784591 -60710383 - MLT1F2 LTR MaLR -77 483 66 3 911 269 317 65 97 chr15 42784711 42784896 -60710078 + MIR SINE MIR 66 244 -18 3 911 2757 33 0 0 chr15 42786402 42786732 -60708242 - L1Md_F3 LINE L1 -1 6583 6254 3 911 1111 331 76 37 chr15 42786732 42787239 -60707735 + MLT1K LTR MaLR 20 548 -47 3 911 208 323 75 83 chr15 42787667 42787907 -60707067 - L3 LINE CR1 -277 4212 3975 3 911 795 272 109 50 chr15 42788153 42788527 -60706447 - L1MA4 LINE L1 -329 5971 5562 3 911 3105 56 5 5 chr15 42788527 42788922 -60706052 + MTA_Mm LTR MaLR 1 395 -1 3 911 795 272 107 49 chr15 42788922 42789100 -60705874 - L1MA4 LINE L1 -739 5561 5386 3 911 387 60 0 0 chr15 42789160 42789210 -60705764 + (TCC)n Simple_repeat Simple_repeat 3 52 0 3 911 254 232 0 0 chr15 42789287 42789343 -60705631 - L1M2 LINE L1 -922 5218 5163 4 911 441 286 48 0 chr15 42789347 42789473 -60705501 - B1F2 SINE Alu -17 132 1 4 911 840 293 11 4 chr15 42789475 42789739 -60705235 - L1M2 LINE L1 -1224 4919 4654 4 911 25 31 0 0 chr15 42789827 42789859 -60705115 + AT_rich Low_complexity Low_complexity 1 32 0 4 911 850 211 6 25 chr15 42789859 42790019 -60704955 + RLTR25B LTR ERVK 1 157 -871 4 911 330 80 0 0 chr15 42790359 42790409 -60704565 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 911 797 52 0 9 chr15 42790418 42790534 -60704440 + (TAGA)n Simple_repeat Simple_repeat 4 118 0 4 911 535 220 43 3 chr15 42791494 42791623 -60703351 - ORR1D1 LTR MaLR -1 383 234 4 911 336 176 0 42 chr15 42791690 42791761 -60703213 - ORR1D1 LTR MaLR -158 226 159 4 911 3394 149 118 14 chr15 42791761 42792413 -60702561 + RMER6D LTR ERVK 1 720 0 4 911 892 182 7 0 chr15 42792413 42792566 -60702408 - ORR1D1 LTR MaLR -218 156 3 4 911 643 210 49 89 chr15 42793242 42793467 -60701507 - B3 SINE B2 0 216 1 4 911 260 319 77 35 chr15 42793484 42793627 -60701347 - MIRb SINE MIR -8 260 112 4 911 406 268 87 47 chr15 42794601 42794750 -60700224 - RSINE1 SINE B4 -8 157 3 4 911 4692 40 2 3 chr15 42794812 42795387 -60699587 - L1Md_F2 LINE L1 -5 6577 6004 4 911 544 256 202 0 chr15 42795533 42795701 -60699273 - B3 SINE B2 -13 203 2 4 911 1950 127 14 58 chr15 42795957 42796301 -60698673 + ORR1A4 LTR MaLR 1 329 0 4 911 345 349 91 74 chr15 42796414 42796636 -60698338 + MLT2B1 LTR ERVL 1 229 -327 4 911 511 15 29 0 chr15 42796636 42796704 -60698270 + (TC)n Simple_repeat Simple_repeat 2 71 0 4 911 321 26 0 0 chr15 42796704 42796741 -60698233 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 911 617 321 43 42 chr15 42796741 42797020 -60697954 + MLT2B1 LTR ERVL 218 534 -20 4 911 283 256 12 25 chr15 42797020 42797100 -60697874 + CT-rich Low_complexity Low_complexity 5 83 0 4 911 237 180 0 0 chr15 42797397 42797447 -60697527 + A-rich Low_complexity Low_complexity 1 50 0 4 911 1042 175 10 39 chr15 42797993 42798201 -60696773 + URR1A DNA MER1_type 25 226 0 4 911 487 248 178 0 chr15 42798231 42798360 -60696614 + B3 SINE B2 64 215 -1 4 911 28 0 0 0 chr15 42798511 42798539 -60696435 + AT_rich Low_complexity Low_complexity 1 28 0 4 911 3028 110 220 16 chr15 42798545 42799108 -60695866 - RLTR33 LTR ERVK 0 678 1 4 911 741 198 15 74 chr15 42800813 42801015 -60693959 + B2_Mm2 SINE B2 1 190 -5 4 911 591 282 26 79 chr15 42801230 42801457 -60693517 + B3 SINE B2 2 216 0 4 911 606 297 21 0 chr15 42801461 42801606 -60693368 + B1_Mur2 SINE Alu 2 149 0 4 911 249 33 0 0 chr15 42801950 42801980 -60692994 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 911 504 120 0 0 chr15 42801981 42802081 -60692893 + (GA)n Simple_repeat Simple_repeat 2 101 0 4 911 1160 41 7 7 chr15 42802422 42802568 -60692406 + B1_Mm SINE Alu 2 147 0 4 911 243 0 0 0 chr15 42803530 42803557 -60691417 + (A)n Simple_repeat Simple_repeat 1 27 0 4 911 247 337 77 44 chr15 42804251 42804434 -60690540 + L1M3e LINE L1 81 269 -6761 4 911 413 305 9 0 chr15 42806765 42806870 -60688104 + B3A SINE B2 5 110 -88 4 911 411 113 0 0 chr15 42806878 42806940 -60688034 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 911 1157 298 106 35 chr15 42807667 42808414 -60686560 + L1MA6 LINE L1 5265 6064 -236 4 911 256 288 71 59 chr15 42809273 42809443 -60685531 + L2 LINE L2 2411 2582 -837 4 911 245 277 15 0 chr15 42810157 42810222 -60684752 - PB1D10 SINE Alu -51 66 1 4 911 1764 189 59 90 chr15 42811827 42812166 -60682808 + RMER6B LTR ERVK 1 336 -125 4 911 636 14 0 0 chr15 42812166 42812239 -60682735 + (GTTTG)n Simple_repeat Simple_repeat 5 77 0 4 911 1764 189 59 90 chr15 42812239 42812375 -60682599 + RMER6B LTR ERVK 337 461 0 4 911 340 285 65 0 chr15 42812376 42812499 -60682475 - Tigger7 DNA MER2_type -168 2323 2193 4 911 462 258 0 0 chr15 42812501 42812594 -60682380 - ORR1E LTR MaLR -266 93 1 4 911 305 286 0 0 chr15 42812765 42812835 -60682139 - ID4_ SINE ID -12 71 2 4 911 363 113 0 0 chr15 42813612 42813674 -60681300 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 911 1217 34 0 7 chr15 42814018 42814166 -60680808 + B1_Mus2 SINE Alu 1 147 0 4 911 206 329 21 0 chr15 42814796 42814939 -60680035 + (CACCAT)n Simple_repeat Simple_repeat 3 148 0 4 911 693 283 107 52 chr15 42815812 42816084 -60678890 - B4A SINE B4 0 292 6 4 911 281 350 0 12 chr15 42816491 42816572 -60678402 + ID4 SINE ID 2 81 -2 4 911 528 318 73 44 chr15 42817958 42818231 -60676743 - B4A SINE B4 -2 290 10 4 911 340 305 136 21 chr15 42818444 42818635 -60676339 + Tigger7 DNA MER2_type 2233 2445 -46 4 911 668 347 14 14 chr15 42819788 42820004 -60674970 - B4 SINE B4 0 292 77 4 911 371 307 224 84 chr15 42820231 42820486 -60674488 + B4A SINE B4 2 292 0 4 911 21 0 0 0 chr15 42821414 42821435 -60673539 + AT_rich Low_complexity Low_complexity 1 21 0 4 911 261 0 0 0 chr15 42821739 42821768 -60673206 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 911 198 300 0 77 chr15 42821920 42821985 -60672989 + MIRm SINE MIR 215 274 -2 4 911 535 279 77 18 chr15 42822418 42822586 -60672388 - MTD LTR MaLR -241 178 1 4 911 258 321 69 49 chr15 42823101 42823304 -60671670 + MIRb SINE MIR 59 265 -3 4 911 201 121 0 0 chr15 42823365 42823398 -60671576 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 911 192 393 57 8 chr15 42823631 42823754 -60671220 + MER5A DNA MER1_type 56 184 -5 4 911 304 286 0 12 chr15 42825496 42825581 -60669393 + GA-rich Low_complexity Low_complexity 1 84 0 4 911 183 42 0 0 chr15 42825724 42825748 -60669226 + (TC)n Simple_repeat Simple_repeat 1 24 0 4 911 180 0 0 0 chr15 42825977 42825997 -60668977 + (A)n Simple_repeat Simple_repeat 1 20 0 4 911 610 147 26 20 chr15 42826473 42826626 -60668348 + GA-rich Low_complexity Low_complexity 3 156 0 4 911 270 207 67 33 chr15 42828079 42828169 -60666805 - L1MC LINE L1 -972 5174 5082 4 911 235 287 0 33 chr15 42828560 42828650 -60666324 + MLT1L LTR MaLR 507 593 -17 4 911 465 318 13 26 chr15 42829657 42829812 -60665162 + MER5A DNA MER1_type 15 167 -22 4 911 181 184 79 0 chr15 42831018 42831056 -60663918 + MIRm SINE MIR 125 165 -111 4 911 291 191 0 0 chr15 42831124 42831187 -60663787 + (ATG)n Simple_repeat Simple_repeat 2 64 0 4 911 311 159 48 0 chr15 42831861 42831924 -60663050 - MTD LTR MaLR 0 419 354 4 911 637 281 133 18 chr15 42831938 42831977 -60662997 - MTD LTR MaLR -121 298 260 4 911 1260 37 0 0 chr15 42831977 42832139 -60662835 + (TG)n Simple_repeat Simple_repeat 2 163 0 4 911 637 281 133 18 chr15 42832139 42832324 -60662650 - MTD LTR MaLR -160 259 48 4 911 520 73 24 0 chr15 42832448 42832530 -60662444 + (TC)n Simple_repeat Simple_repeat 2 85 0 4 911 29 28 0 0 chr15 42832706 42832742 -60662232 + AT_rich Low_complexity Low_complexity 1 36 0 4 911 225 238 39 10 chr15 42832989 42833091 -60661883 + L1M4 LINE L1 3673 3777 -2369 4 911 216 163 0 0 chr15 42833679 42833722 -60661252 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 911 555 331 51 16 chr15 42833750 42834005 -60660969 - Lx9 LINE L1 -215 7429 7166 4 911 432 0 0 0 chr15 42834025 42834073 -60660901 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 4 911 357 109 0 0 chr15 42834377 42834441 -60660533 + Lx3_Mus LINE L1 6946 7009 0 4 911 206 286 36 0 chr15 42835233 42835289 -60659685 - L2c LINE L2 -10 3377 3320 4 911 200 89 67 0 chr15 42835325 42835370 -60659604 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 4 911 233 291 63 50 chr15 42836570 42836809 -60658165 + L1MC LINE L1 5154 5395 -751 4 911 293 184 60 0 chr15 42836997 42837165 -60657809 + (TA)n Simple_repeat Simple_repeat 1 178 0 4 911 637 259 7 7 chr15 42837701 42837841 -60657133 + B3A SINE B2 8 147 -51 4 911 267 169 0 0 chr15 42837844 42837915 -60657059 + GA-rich Low_complexity Low_complexity 2 72 0 4 911 214 238 0 0 chr15 42837998 42838040 -60656934 + GA-rich Low_complexity Low_complexity 4 45 0 4 911 243 256 49 0 chr15 42839642 42839724 -60655250 - L1M5 LINE L1 -740 5433 5348 4 911 596 287 31 19 chr15 42839770 42839958 -60655016 - B3A SINE B2 -3 190 2 4 911 612 0 0 0 chr15 42840146 42840214 -60654760 + (TC)n Simple_repeat Simple_repeat 1 68 0 4 911 608 269 87 44 chr15 42842755 42842961 -60652013 + B3A SINE B2 2 216 0 4 911 2546 105 70 5 chr15 42843512 42843930 -60651044 + BGLII_Mus LTR ERVK 1 415 -7 4 911 1251 244 123 29 chr15 42843939 42844395 -60650579 - L1MA4 LINE L1 -112 6188 5690 4 911 30 0 0 0 chr15 42844459 42844489 -60650485 + AT_rich Low_complexity Low_complexity 1 30 0 4 911 609 261 22 29 chr15 42847024 42847162 -60647812 + RSINE1 SINE B4 3 139 -26 4 911 315 0 0 0 chr15 42847163 42847198 -60647776 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 911 513 0 0 0 chr15 42847198 42847254 -60647720 + (GA)n Simple_repeat Simple_repeat 2 58 0 4 911 225 132 0 0 chr15 42847262 42847300 -60647674 + (CAGA)n Simple_repeat Simple_repeat 3 40 0 4 911 261 240 111 37 chr15 42847593 42847701 -60647273 - MLT1B LTR MaLR -4 386 271 4 911 245 301 138 14 chr15 42847892 42848030 -60646944 - MLT1B LTR MaLR -293 155 1 4 911 300 262 117 72 chr15 42848763 42848874 -60646100 - ID_B1 SINE B4 -26 198 83 4 911 388 320 81 37 chr15 42848901 42849199 -60645775 + L2 LINE L2 2155 2465 -954 4 911 185 343 99 91 chr15 42849335 42849556 -60645418 + L2 LINE L2 2706 2928 -491 4 911 243 0 0 0 chr15 42850674 42850701 -60644273 + (A)n Simple_repeat Simple_repeat 1 27 0 4 911 422 367 110 66 chr15 42850934 42851372 -60643602 + LTR33A LTR ERVL 60 516 -4 4 911 401 305 173 24 chr15 42851748 42852037 -60642937 - MER2 DNA MER2_type -9 336 5 4 911 193 167 0 0 chr15 42852090 42852120 -60642854 - MIR SINE MIR -145 117 88 4 911 279 0 0 0 chr15 42856195 42856226 -60638748 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 911 558 271 87 36 chr15 42856226 42856414 -60638560 + B3 SINE B2 12 210 -6 5 911 2256 281 54 25 chr15 42857089 42858210 -60636764 + Lx5 LINE L1 5973 7386 -74 5 911 546 204 106 0 chr15 42858465 42858578 -60636396 + B3A SINE B2 1 125 -73 5 911 22 56 0 0 chr15 42859078 42859114 -60635860 + AT_rich Low_complexity Low_complexity 1 36 0 5 912 279 0 0 0 chr15 42860721 42860752 -60634222 + (CAA)n Simple_repeat Simple_repeat 1 31 0 5 912 448 214 45 0 chr15 42861300 42861412 -60633562 - L1MA8 LINE L1 -13 6278 6162 5 912 1088 146 0 11 chr15 42861682 42861862 -60633112 + L1_Mur1 LINE L1 4850 5027 -859 5 912 4452 183 58 2 chr15 42861862 42862806 -60632168 + Lx3C LINE L1 5978 6974 -2 5 912 1042 209 12 12 chr15 42862941 42863193 -60631781 + L1_Rod LINE L1 1629 1880 -3967 5 912 552 84 0 0 chr15 42863207 42863290 -60631684 + (GGA)n Simple_repeat Simple_repeat 1 83 0 5 912 270 0 0 0 chr15 42863290 42863320 -60631654 + (TAA)n Simple_repeat Simple_repeat 2 31 0 5 912 4072 295 68 86 chr15 42863345 42864143 -60630831 + Lx9 LINE L1 2973 3647 -2233 5 912 1166 106 0 11 chr15 42864143 42864325 -60630649 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 5 912 4072 295 68 86 chr15 42864325 42864348 -60630626 + Lx9 LINE L1 3648 3660 -2220 5 912 1124 103 6 0 chr15 42864348 42864522 -60630452 + (GGAA)n Simple_repeat Simple_repeat 3 177 0 5 912 6607 222 76 44 chr15 42864522 42866864 -60628110 + Lx9 LINE L1 3661 6110 -1534 5 912 1593 216 61 14 chr15 42866928 42867290 -60627684 + Lx9 LINE L1 6375 6753 -891 5 912 300 264 61 21 chr15 42867285 42867564 -60627410 + Lx9 LINE L1 7346 7635 -9 5 912 192 77 0 0 chr15 42867567 42867593 -60627381 + (TATAA)n Simple_repeat Simple_repeat 1 26 0 5 912 30 0 0 0 chr15 42867704 42867734 -60627240 + AT_rich Low_complexity Low_complexity 1 30 0 5 912 229 195 0 0 chr15 42867986 42868027 -60626947 + RMER1C Other Other 615 655 -687 5 912 386 195 0 11 chr15 42870125 42870213 -60624761 + L1MA9 LINE L1 5274 5360 -931 5 912 761 311 74 24 chr15 42870290 42870711 -60624263 + L1MA9 LINE L1 5576 6017 -295 5 912 332 282 14 0 chr15 42870796 42870867 -60624107 - ID2 SINE ID 0 83 12 5 912 495 98 33 0 chr15 42870965 42871057 -60623917 + (TA)n Simple_repeat Simple_repeat 1 95 0 5 912 315 0 0 0 chr15 42871058 42871093 -60623881 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 912 1175 249 89 22 chr15 42871361 42871677 -60623297 - Lx6 LINE L1 -10 7450 7114 5 912 1648 244 91 0 chr15 42871815 42872279 -60622695 + Lx9 LINE L1 7138 7643 -1 5 912 798 109 0 0 chr15 42872369 42872488 -60622486 + (TATATG)n Simple_repeat Simple_repeat 5 123 0 5 912 195 115 37 37 chr15 42873022 42873076 -60621898 + (ATTG)n Simple_repeat Simple_repeat 2 55 0 5 912 287 324 0 0 chr15 42874258 42874369 -60620605 + (CA)n Simple_repeat Simple_repeat 2 112 0 5 912 399 159 45 36 chr15 42874480 42874591 -60620383 - Lx9 LINE L1 0 7644 7533 5 912 226 340 46 28 chr15 42874732 42874841 -60620133 + PB1D10 SINE Alu 4 114 -3 5 912 1053 260 34 0 chr15 42879235 42879504 -60615470 + Lx6 LINE L1 7069 7346 -114 5 912 25 51 0 0 chr15 42879511 42879550 -60615424 + AT_rich Low_complexity Low_complexity 1 39 0 5 912 210 37 0 0 chr15 42880497 42880524 -60614450 + (GA)n Simple_repeat Simple_repeat 1 27 0 5 912 27 29 0 0 chr15 42880942 42880976 -60613998 + AT_rich Low_complexity Low_complexity 1 34 0 5 912 549 207 33 0 chr15 42881679 42881829 -60613145 + G-rich Low_complexity Low_complexity 2 156 0 5 912 544 104 11 0 chr15 42883019 42883111 -60611863 + L1_Mur2 LINE L1 3650 3746 -2400 5 912 315 0 0 0 chr15 42883536 42883571 -60611403 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 912 7199 112 36 4 chr15 42884553 42885904 -60609070 + Lx LINE L1 5130 6518 -136 5 912 225 0 0 0 chr15 42885904 42885929 -60609045 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 912 7199 91 39 2 chr15 42885929 42886043 -60608931 + Lx LINE L1 6519 6650 -4 5 912 211 28 56 0 chr15 42889879 42889915 -60605059 + (CAA)n Simple_repeat Simple_repeat 2 39 0 5 912 21 36 0 0 chr15 42889958 42889986 -60604988 + AT_rich Low_complexity Low_complexity 1 28 0 5 912 772 78 0 52 chr15 42891439 42891575 -60603399 - L1Md_F3 LINE L1 -2 6582 6454 5 912 905 286 114 34 chr15 42891641 42891992 -60602982 - MTE2a LTR MaLR 0 379 1 5 912 2269 100 8 77 chr15 42892175 42892554 -60602420 - Lx2A LINE L1 0 7008 6656 5 912 26 0 0 0 chr15 42892578 42892604 -60602370 + AT_rich Low_complexity Low_complexity 1 26 0 5 912 236 339 57 12 chr15 42894118 42894303 -60600671 - MIR SINE MIR -31 237 29 5 912 3077 221 61 58 chr15 42895714 42897145 -60597829 - Lx7 LINE L1 -329 7367 6029 5 912 3826 57 0 0 chr15 42897221 42897695 -60597279 + L1Md_F2 LINE L1 5864 6337 -245 5 912 967 233 72 13 chr15 42897695 42897930 -60597044 + Lx7 LINE L1 7447 7695 -1 5 912 644 241 42 42 chr15 42897959 42898171 -60596803 + B3 SINE B2 5 216 0 5 912 23 0 0 0 chr15 42900023 42900046 -60594928 + AT_rich Low_complexity Low_complexity 1 23 0 5 912 2319 0 0 0 chr15 42900050 42900308 -60594666 - L1Md_T LINE L1 0 6582 6325 5 912 1372 45 0 9 chr15 42900829 42901167 -60593807 + (CA)n Simple_repeat Simple_repeat 1 334 0 5 912 198 0 0 0 chr15 42901620 42901642 -60593332 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 5 912 243 0 0 0 chr15 42901977 42902004 -60592970 + (TC)n Simple_repeat Simple_repeat 2 28 0 5 912 243 0 0 0 chr15 42902456 42902483 -60592491 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 912 217 336 65 32 chr15 42904032 42904155 -60590819 - MIR3 SINE MIR -36 172 46 5 912 279 0 0 0 chr15 42906122 42906153 -60588821 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 5 912 886 281 96 19 chr15 42906269 42906530 -60588444 + B4A SINE B4 12 292 0 5 912 234 125 42 0 chr15 42907012 42907060 -60587914 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 912 309 185 0 0 chr15 42907939 42908004 -60586970 + (TG)n Simple_repeat Simple_repeat 1 65 0 5 912 1040 126 85 6 chr15 42908638 42908814 -60586160 + B2_Mm1t SINE B2 1 190 -3 5 912 2086 60 19 0 chr15 42912998 42913267 -60581707 - L1_Mus1 LINE L1 0 6567 6294 5 912 24 67 0 0 chr15 42913276 42913321 -60581653 + AT_rich Low_complexity Low_complexity 1 45 0 5 912 518 73 61 0 chr15 42914517 42914599 -60580375 - Lx LINE L1 0 6654 6568 5 912 232 205 17 51 chr15 42915280 42915398 -60579576 + C-rich Low_complexity Low_complexity 4 117 0 5 912 695 191 0 6 chr15 42916640 42916798 -60578176 + (CA)n Simple_repeat Simple_repeat 1 157 0 5 912 245 250 99 10 chr15 42917075 42917176 -60577798 - PB1D9 SINE Alu -9 111 2 5 912 252 59 0 0 chr15 42917358 42917392 -60577582 + (A)n Simple_repeat Simple_repeat 1 34 0 5 912 309 304 54 0 chr15 42917921 42918013 -60576961 - MER58B DNA MER1_type -21 320 224 5 912 832 175 14 7 chr15 42918021 42918165 -60576809 + B1_Mm SINE Alu 3 147 0 5 912 192 40 0 0 chr15 42918184 42918209 -60576765 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 5 912 314 311 22 0 chr15 42918410 42918500 -60576474 + PB1D7 SINE Alu 24 115 -5 5 912 2378 194 52 76 chr15 42918758 42919321 -60575653 + RLTR20B3 LTR ERVK 1 549 -28 5 912 807 274 47 107 chr15 42919329 42919693 -60575281 - MTE2a LTR MaLR -30 349 8 5 912 8416 121 48 12 chr15 42919693 42921136 -60573838 + L1_Mur2 LINE L1 3977 5472 -405 5 912 393 232 18 18 chr15 42921120 42921234 -60573740 + Lx2B LINE L1 6885 6998 -2 5 912 234 164 107 18 chr15 42921235 42921291 -60573683 + B1F SINE Alu 87 147 -2 5 912 21 0 0 0 chr15 42921977 42921998 -60572976 + AT_rich Low_complexity Low_complexity 1 21 0 5 912 201 245 0 0 chr15 42922046 42922095 -60572879 + T-rich Low_complexity Low_complexity 1 49 0 5 912 263 20 0 89 chr15 42923993 42924049 -60570925 + (CAAAA)n Simple_repeat Simple_repeat 1 51 0 5 912 315 115 0 55 chr15 42924089 42924106 -60570868 - HAL1-3A_ME LINE L1 -832 2026 2012 5 912 276 30 0 0 chr15 42924106 42924139 -60570835 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 912 315 115 0 55 chr15 42924139 42924176 -60570798 - HAL1-3A_ME LINE L1 -847 2011 1975 5 912 555 184 22 0 chr15 42924176 42924312 -60570662 + (TA)n Simple_repeat Simple_repeat 2 140 0 5 912 1221 303 39 28 chr15 42924992 42925538 -60569436 + Lx9 LINE L1 6880 7431 -213 5 912 1610 27 0 0 chr15 42926065 42926250 -60568724 - L1Md_F2 LINE L1 -330 5553 5369 5 912 244 67 0 0 chr15 42926250 42926280 -60568694 + L1Md_F2 LINE L1 5557 5586 -297 5 912 7435 53 30 3 chr15 42926280 42927237 -60567737 + L1Md_F2 LINE L1 5587 6569 -13 5 912 3088 51 12 22 chr15 42927640 42928040 -60566934 + MTA_Mm LTR MaLR 1 396 0 5 912 232 188 22 45 chr15 42928350 42928439 -60566535 - Lx6 LINE L1 0 7460 7374 5 912 479 269 19 0 chr15 42928447 42928555 -60566419 - PB1D9 SINE Alu -10 110 1 5 912 1919 84 80 0 chr15 42928769 42929068 -60565906 - Lx2 LINE L1 -7 6990 6668 5 912 3150 128 2 33 chr15 42929069 42929584 -60565390 + Lx2 LINE L1 6168 6666 -331 5 912 46 19 0 0 chr15 42932173 42932226 -60562748 + AT_rich Low_complexity Low_complexity 1 53 0 5 912 21 57 0 0 chr15 42932256 42932291 -60562683 + AT_rich Low_complexity Low_complexity 1 35 0 5 912 1590 246 141 36 chr15 42932487 42933019 -60561955 + Lx7 LINE L1 7109 7696 0 5 912 4386 125 18 22 chr15 42933369 42934087 -60560887 + Lx2A1 LINE L1 6294 7008 0 5 912 772 317 33 93 chr15 42934914 42935311 -60559663 + MTE2a LTR MaLR 5 377 -2 5 912 300 287 121 35 chr15 42935332 42935473 -60559501 + HAL1-3A_ME LINE L1 2286 2438 -420 5 912 399 96 35 46 chr15 42935952 42936039 -60558935 + G-rich Low_complexity Low_complexity 1 86 0 5 912 249 33 0 0 chr15 42938136 42938166 -60556808 + (TATG)n Simple_repeat Simple_repeat 2 31 0 5 912 31 44 0 0 chr15 42938572 42938617 -60556357 + AT_rich Low_complexity Low_complexity 1 45 0 5 912 253 293 104 11 chr15 42938666 42938753 -60556221 - Lx7 LINE L1 -279 7417 7315 5 912 537 92 0 0 chr15 42938753 42938829 -60556145 + (CA)n Simple_repeat Simple_repeat 2 77 0 5 912 253 293 104 11 chr15 42938829 42938924 -60556050 - Lx7 LINE L1 -382 7314 7219 5 912 306 0 0 0 chr15 42939695 42939729 -60555245 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 912 501 62 0 0 chr15 42940180 42940245 -60554729 + (CA)n Simple_repeat Simple_repeat 2 66 0 6 912 282 262 0 0 chr15 42941147 42941208 -60553766 + PB1D10 SINE Alu 46 106 -11 6 912 322 253 12 12 chr15 42941280 42941364 -60553610 + Lx7 LINE L1 6091 6174 -1522 6 912 2400 102 52 10 chr15 42941369 42941756 -60553218 + Lx LINE L1 6251 6653 -1 6 912 202 184 39 26 chr15 42942421 42942499 -60552475 + (TATAA)n Simple_repeat Simple_repeat 4 82 0 6 912 1762 315 35 38 chr15 42942528 42943268 -60551706 + Lx8 LINE L1 6573 7310 -163 6 912 266 0 29 0 chr15 42943280 42943314 -60551660 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 912 238 319 17 0 chr15 42943398 42943514 -60551460 + A-rich Low_complexity Low_complexity 3 120 0 6 912 1121 126 11 6 chr15 42943573 42943756 -60551218 + L1_Mus3 LINE L1 6455 6638 0 6 912 761 230 34 77 chr15 42943807 42944014 -60550960 + B3A SINE B2 1 198 0 6 912 512 213 205 0 chr15 42944037 42944159 -60550815 + B1_Mur2 SINE Alu 3 149 0 6 912 803 184 114 0 chr15 42944232 42944390 -60550584 + RLTR11A2 LTR ERVK 1 176 -351 6 912 225 65 0 0 chr15 42944525 42944556 -60550418 + (TTAA)n Simple_repeat Simple_repeat 1 31 0 6 912 260 172 35 0 chr15 42945902 42945960 -60549014 + MamGypLTR2b LTR Gypsy 832 891 -31 6 912 423 0 0 0 chr15 42948781 42948828 -60546146 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 912 579 281 136 62 chr15 42949056 42949394 -60545580 + MER31B LTR ERV1 1 363 -103 6 912 254 200 22 0 chr15 42949627 42949672 -60545302 + BC1_Mm scRNA scRNA 3 48 -104 6 912 972 0 0 0 chr15 42949705 42949813 -60545161 + (GAGAA)n Simple_repeat Simple_repeat 1 108 0 6 912 354 284 152 5 chr15 42949879 42950063 -60544911 + HAL1 LINE L1 1641 1851 -656 6 912 626 288 83 5 chr15 42950284 42950476 -60544498 + ID_B1 SINE B4 1 207 -17 6 912 3442 115 43 8 chr15 42951720 42952255 -60542719 - Lx LINE L1 -5 6649 6096 6 912 1178 120 27 0 chr15 42952261 42952445 -60542529 - B2_Mm2 SINE B2 -6 189 1 6 912 263 214 0 0 chr15 42952446 42952502 -60542472 - Lx6 LINE L1 -38 7422 7367 6 912 983 203 0 20 chr15 42953642 42953838 -60541136 + URR1A DNA MER1_type 33 224 -2 6 912 359 346 37 33 chr15 42953838 42953875 -60541099 - CYRA11_Mm Unknown Y-chromosome -450 167 130 6 912 344 271 32 61 chr15 42955156 42955313 -60539661 + L1MC4 LINE L1 5671 5825 -299 6 912 588 202 53 0 chr15 42955318 42955432 -60539542 + B1_Mur2 SINE Alu 29 148 -1 6 912 346 360 12 30 chr15 42955518 42955687 -60539287 + L1MC4 LINE L1 5908 6073 -1809 6 912 427 282 117 36 chr15 42955907 42956293 -60538681 + L1MC4 LINE L1 6746 7162 -880 6 912 388 333 13 13 chr15 42956372 42956524 -60538450 + RSINE1 SINE B4 1 152 -13 6 912 26 74 0 0 chr15 42956540 42956594 -60538380 + AT_rich Low_complexity Low_complexity 1 54 0 6 912 1105 153 19 47 chr15 42956629 42956841 -60538133 - URR1B DNA MER1_type 0 225 20 6 912 350 363 45 31 chr15 42956921 42957143 -60537831 + L1MC4 LINE L1 7320 7544 -498 6 912 971 185 107 0 chr15 42957176 42957354 -60537620 - MTC LTR MaLR 0 421 225 6 912 554 222 0 0 chr15 42957343 42957442 -60537532 - MTC LTR MaLR -313 108 10 6 912 5442 220 68 17 chr15 42957479 42958703 -60536271 + Lx7 LINE L1 6058 7354 -342 6 912 390 114 0 0 chr15 42958703 42958773 -60536201 + (TG)n Simple_repeat Simple_repeat 2 71 0 6 912 5442 220 68 17 chr15 42958773 42958951 -60536023 + Lx7 LINE L1 7355 7531 -165 6 912 21 0 0 0 chr15 42959001 42959022 -60535952 + AT_rich Low_complexity Low_complexity 1 21 0 6 912 378 326 134 58 chr15 42959035 42959484 -60535490 + L1MC4 LINE L1 7560 8042 0 6 912 2056 316 51 33 chr15 42959826 42960791 -60534183 + Lx8 LINE L1 6328 7309 -164 6 912 1513 164 35 86 chr15 42960817 42961175 -60533799 + MTC-int LTR MaLR 870 1210 -48 6 912 911 86 31 0 chr15 42961175 42961303 -60533671 + B1_Mus1 SINE Alu 2 133 -15 6 912 1513 164 35 86 chr15 42961303 42961317 -60533657 + MTC-int LTR MaLR 1211 1223 -35 6 912 775 194 48 54 chr15 42961317 42961892 -60533082 + RMER3D-int LTR ERVK 221 1204 -1638 6 912 288 143 0 167 chr15 42961918 42962002 -60532972 + RLTR17 LTR ERVK 623 692 0 6 912 285 366 0 0 chr15 42962098 42962180 -60532794 - MTE-int LTR MaLR -970 610 529 6 912 752 271 10 9 chr15 42962176 42962367 -60532607 - MTE-int LTR MaLR -1181 399 177 6 912 351 0 0 0 chr15 42962717 42962756 -60532218 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 912 430 321 93 66 chr15 42964017 42964274 -60530700 + B4A SINE B4 1 264 -28 6 912 194 0 39 0 chr15 42964275 42964301 -60530673 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 912 399 41 0 0 chr15 42964301 42964350 -60530624 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 912 595 268 37 25 chr15 42964472 42964633 -60530341 + ID_B1 SINE B4 48 210 -14 6 912 219 293 0 0 chr15 42965151 42965209 -60529765 + CT-rich Low_complexity Low_complexity 1 58 0 6 912 276 30 0 0 chr15 42965610 42965643 -60529331 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 912 228 313 0 48 chr15 42965664 42965768 -60529206 + Lx8 LINE L1 7364 7462 -11 6 912 355 275 60 53 chr15 42966092 42966242 -60528732 + B4A SINE B4 142 292 0 6 912 220 190 35 23 chr15 42966634 42966720 -60528254 + GA-rich Low_complexity Low_complexity 4 90 0 6 912 207 0 0 0 chr15 42967264 42967287 -60527687 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 912 351 0 0 0 chr15 42967594 42967633 -60527341 + (A)n Simple_repeat Simple_repeat 1 39 0 6 912 261 0 0 0 chr15 42969054 42969083 -60525891 + (CAAAAA)n Simple_repeat Simple_repeat 1 29 0 6 912 324 0 0 0 chr15 42969838 42969874 -60525100 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 6 912 180 243 0 0 chr15 42970575 42970612 -60524362 - L3 LINE CR1 -1374 3115 3079 6 912 396 302 36 54 chr15 42970636 42970804 -60524170 - MIR SINE MIR -19 243 79 6 912 792 165 0 0 chr15 42972364 42972491 -60522483 + B3 SINE B2 1 127 -89 6 912 33732 35 1 0 chr15 42972938 42978619 -60516355 + L1Md_T LINE L1 1 5589 -297 6 912 9040 5 0 0 chr15 42978619 42979653 -60515321 + L1Md_T LINE L1 5590 6585 0 6 912 592 231 0 43 chr15 42979683 42979823 -60515151 + B4A SINE B4 4 137 -155 6 912 2488 83 6 0 chr15 42980842 42981167 -60513807 - ORR1A2 LTR MaLR 0 327 1 6 912 240 306 91 12 chr15 42981437 42981603 -60513371 + MIR SINE MIR 12 199 -69 6 912 386 196 5 131 chr15 42981620 42981826 -60513148 + RMER17C LTR ERVK 98 277 -133 6 912 245 275 145 0 chr15 42981865 42981934 -60513040 + ID4 SINE ID 1 79 -4 6 912 395 284 64 58 chr15 42982122 42982294 -60512680 + B3A SINE B2 16 188 -10 6 912 222 37 0 0 chr15 42982881 42982908 -60512066 + (T)n Simple_repeat Simple_repeat 1 27 0 6 912 266 217 33 16 chr15 42982935 42982996 -60511978 + ID4 SINE ID 9 70 -13 6 912 34 0 0 0 chr15 42983683 42983717 -60511257 + AT_rich Low_complexity Low_complexity 1 34 0 6 912 323 213 72 3 chr15 42984169 42984297 -60510677 + L1MC5 LINE L1 7117 7254 -788 6 912 547 209 16 28 chr15 42984657 42984839 -60510135 + GA-rich Low_complexity Low_complexity 1 180 0 6 912 802 293 117 35 chr15 42984953 42985296 -60509678 - MTD LTR MaLR 0 419 49 6 912 518 310 9 32 chr15 42985714 42985934 -60509040 + Lx8 LINE L1 7108 7322 -151 6 912 445 273 0 43 chr15 42986769 42986884 -60508090 - PB1D10 SINE Alu -2 115 6 6 912 364 282 108 74 chr15 42986995 42987171 -60507803 + MLT1C LTR MaLR 286 467 0 6 912 1213 64 92 12 chr15 42987315 42987488 -60507486 - B2_Mm2 SINE B2 -6 189 3 6 912 243 362 98 44 chr15 42987669 42987964 -60507010 - L3 LINE CR1 -700 3789 3479 6 912 4764 97 9 7 chr15 42988670 42989359 -60505615 - L1_Mus3 LINE L1 -5 6633 5944 6 912 208 143 54 0 chr15 42990503 42990559 -60504415 + (TTAA)n Simple_repeat Simple_repeat 2 60 0 6 912 24 0 0 0 chr15 42991282 42991306 -60503668 + AT_rich Low_complexity Low_complexity 1 24 0 6 913 21 0 0 0 chr15 42993112 42993133 -60501841 + AT_rich Low_complexity Low_complexity 1 21 0 6 913 22 80 0 0 chr15 42993249 42993299 -60501675 + AT_rich Low_complexity Low_complexity 1 50 0 6 913 1045 196 29 43 chr15 42995122 42995330 -60499644 + B3 SINE B2 3 207 -9 6 913 881 170 0 0 chr15 42995380 42995527 -60499447 - B1_Mur4 SINE Alu -2 148 2 6 913 558 108 0 0 chr15 42996281 42996364 -60498610 + (TA)n Simple_repeat Simple_repeat 1 83 0 6 913 207 100 0 0 chr15 42998345 42998375 -60496599 + (A)n Simple_repeat Simple_repeat 1 30 0 6 913 489 110 0 0 chr15 42998635 42998708 -60496266 + (A)n Simple_repeat Simple_repeat 1 73 0 6 913 471 35 0 0 chr15 42999662 42999719 -60495255 + (TAA)n Simple_repeat Simple_repeat 3 59 0 6 913 261 0 0 0 chr15 43000805 43000834 -60494140 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 913 511 221 93 16 chr15 43003400 43003529 -60491445 - ID_B1 SINE B4 -2 222 84 2 913 25 0 0 0 chr15 43003852 43003877 -60491097 + AT_rich Low_complexity Low_complexity 1 25 0 3 913 363 23 0 0 chr15 43003877 43003921 -60491053 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 913 820 251 0 6 chr15 43003923 43004099 -60490875 - B3 SINE B2 -24 192 18 5 913 297 0 0 0 chr15 43005600 43005633 -60489341 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 913 591 71 0 0 chr15 43005947 43006032 -60488942 + (TC)n Simple_repeat Simple_repeat 2 86 0 7 913 1499 89 16 0 chr15 43006112 43006302 -60488672 - B2_Mm2 SINE B2 -2 193 1 8 913 924 169 206 11 chr15 43006344 43006524 -60488450 + B3 SINE B2 2 216 0 9 913 613 325 77 48 chr15 43008183 43008319 -60486655 - ERVL-E-int LTR ERVL -3543 2124 1989 1 913 288 0 0 0 chr15 43008319 43008351 -60486623 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 1 913 613 325 77 48 chr15 43008351 43008550 -60486424 - ERVL-E-int LTR ERVL -3679 1988 1779 1 913 374 311 104 0 chr15 43008871 43009006 -60485968 + B1F SINE Alu 1 149 0 1 913 331 372 65 42 chr15 43009240 43009317 -60485657 + MLT2E LTR ERVL 11 98 -530 1 913 522 0 0 0 chr15 43009317 43009375 -60485599 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 913 331 329 45 77 chr15 43009375 43009748 -60485226 + MLT2E LTR ERVL 99 574 -55 1 913 322 307 131 37 chr15 43010089 43010245 -60484729 - HAL1 LINE L1 -867 1640 1480 1 913 225 65 0 0 chr15 43010245 43010276 -60484698 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 913 322 307 131 37 chr15 43010276 43010555 -60484419 - HAL1 LINE L1 -1028 1479 1164 1 913 2931 148 59 68 chr15 43010969 43011645 -60483329 + RMER6C LTR ERVK 1 670 -20 1 913 351 0 0 0 chr15 43012282 43012321 -60482653 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 913 542 274 140 80 chr15 43012395 43012573 -60482401 - L1MA5 LINE L1 -462 5838 5619 1 913 441 0 0 0 chr15 43012573 43012622 -60482352 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 913 1016 288 82 90 chr15 43012622 43013686 -60481288 - L1MA5 LINE L1 -682 5618 4534 1 913 904 267 108 13 chr15 43013739 43014046 -60480928 - Lx8 LINE L1 -518 6955 6620 2 913 734 344 45 3 chr15 43014077 43014412 -60480562 - L1MA5 LINE L1 -2046 4094 3746 1 913 254 226 30 23 chr15 43014412 43014498 -60480476 - MTD LTR MaLR 0 419 285 2 913 329 261 130 0 chr15 43014500 43014592 -60480382 + MTD LTR MaLR 226 329 -90 2 913 222 103 0 108 chr15 43014668 43014733 -60480241 + T-rich Low_complexity Low_complexity 3 60 0 2 913 246 252 90 10 chr15 43014828 43014928 -60480046 - L1MC4a LINE L1 -1282 6600 6493 2 913 1332 183 0 0 chr15 43015145 43015364 -60479610 + URR1B DNA MER1_type 7 225 0 2 913 1063 329 139 9 chr15 43015567 43016122 -60478852 + MER82 DNA MER2_type 2 628 -25 2 913 826 203 143 9 chr15 43016263 43016487 -60478487 + ORR1B1 LTR MaLR 1 254 -140 2 913 619 233 16 0 chr15 43016722 43016851 -60478123 + B1_Mur2 SINE Alu 19 149 0 2 913 812 139 0 7 chr15 43018101 43018165 -60476809 + (GA)n Simple_repeat Simple_repeat 2 65 0 3 913 675 0 0 0 chr15 43018165 43018240 -60476734 + (GGAAA)n Simple_repeat Simple_repeat 4 78 0 3 913 812 139 0 7 chr15 43018240 43018320 -60476654 + (GA)n Simple_repeat Simple_repeat 2 81 0 3 913 396 0 0 0 chr15 43018320 43018364 -60476610 + (GGAA)n Simple_repeat Simple_repeat 2 45 0 3 913 278 268 28 14 chr15 43018477 43018549 -60476425 + B1F SINE Alu 7 79 -70 3 913 315 49 0 0 chr15 43019124 43019165 -60475809 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 913 317 340 110 76 chr15 43019824 43020114 -60474860 - MER102a DNA MER1_type -22 308 9 3 913 301 286 26 0 chr15 43021158 43021235 -60473739 - ID4_ SINE ID 0 83 5 3 913 523 293 20 20 chr15 43021548 43021701 -60473273 - RSINE1 SINE B4 -1 164 12 3 913 21 95 0 0 chr15 43022196 43022259 -60472715 + AT_rich Low_complexity Low_complexity 1 63 0 3 913 700 230 167 11 chr15 43022462 43022642 -60472332 - B3 SINE B2 -8 208 1 4 913 412 59 29 0 chr15 43024180 43024248 -60470726 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 913 247 339 87 29 chr15 43024390 43024430 -60470544 + ORR1E LTR MaLR 127 166 -193 4 913 536 29 14 0 chr15 43024430 43024500 -60470474 + (TTTTG)n Simple_repeat Simple_repeat 3 73 0 4 913 247 339 87 29 chr15 43024500 43024632 -60470342 + ORR1E LTR MaLR 167 308 -51 4 913 905 290 17 37 chr15 43025006 43025303 -60469671 + B4A SINE B4 2 292 0 4 913 446 205 0 13 chr15 43026050 43026129 -60468845 + B4A SINE B4 2 79 -213 4 913 278 282 76 114 chr15 43026129 43026234 -60468740 + B3A SINE B2 2 178 -20 4 913 332 306 65 0 chr15 43027898 43028006 -60466968 + MIRb SINE MIR 109 223 -45 4 913 225 263 37 112 chr15 43028256 43028363 -60466611 - MTE2a LTR MaLR -3 376 278 4 913 327 85 0 0 chr15 43028658 43028705 -60466269 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 913 216 0 0 0 chr15 43029691 43029715 -60465259 + (A)n Simple_repeat Simple_repeat 1 24 0 5 913 257 27 0 51 chr15 43030199 43030238 -60464736 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 5 913 536 299 88 7 chr15 43030858 43031006 -60463968 + B3A SINE B2 1 160 -38 5 913 399 68 0 0 chr15 43031009 43031068 -60463906 + (CAGA)n Simple_repeat Simple_repeat 4 62 0 5 913 190 340 0 0 chr15 43031193 43031243 -60463731 - MIR SINE MIR -81 127 78 5 913 428 51 17 0 chr15 43031317 43031376 -60463598 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 913 216 0 0 0 chr15 43032669 43032693 -60462281 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 913 347 282 0 95 chr15 43033173 43033310 -60461664 + L1MC4a LINE L1 5739 5862 -2020 5 913 324 0 0 0 chr15 43033670 43033706 -60461268 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 913 22 0 0 0 chr15 43035573 43035595 -60459379 + AT_rich Low_complexity Low_complexity 1 22 0 5 913 969 152 0 27 chr15 43035609 43035758 -60459216 + B1_Mus2 SINE Alu 3 147 0 6 913 184 200 0 35 chr15 43036789 43036846 -60458128 + GA-rich Low_complexity Low_complexity 4 58 0 6 913 1562 31 26 10 chr15 43038506 43038699 -60456275 - L1Md_F3 LINE L1 -1 6583 6388 6 913 2934 75 64 3 chr15 43039208 43039585 -60455389 - MTB LTR MaLR 0 400 1 6 913 2847 237 115 15 chr15 43040656 43040888 -60454086 - Lx7 LINE L1 0 7696 7414 6 913 249 108 0 0 chr15 43040888 43040925 -60454049 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 913 2847 179 174 22 chr15 43040925 43041516 -60453458 - Lx7 LINE L1 -283 7413 6729 6 913 23 0 0 0 chr15 43041715 43041738 -60453236 + AT_rich Low_complexity Low_complexity 1 23 0 6 913 427 284 41 28 chr15 43042314 43042459 -60452515 + B1F SINE Alu 3 149 0 6 913 517 335 69 38 chr15 43042959 43043025 -60451949 + MER54A LTR ERVL 272 336 -565 6 913 2291 166 56 0 chr15 43043025 43043398 -60451576 + ORR1B1 LTR MaLR 1 394 0 6 913 517 335 69 38 chr15 43043398 43043592 -60451382 + MER54A LTR ERVL 337 540 -361 6 913 822 334 38 19 chr15 43044087 43044401 -60450573 + MTE2b LTR MaLR 58 377 -2 7 913 554 298 90 64 chr15 43044427 43044660 -60450314 - B4A SINE B4 -51 241 3 7 913 5280 104 6 10 chr15 43045491 43046218 -60448756 + L1_Mus3 LINE L1 5915 6638 0 7 913 25 0 0 0 chr15 43047564 43047589 -60447385 + AT_rich Low_complexity Low_complexity 1 25 0 7 913 28 0 0 0 chr15 43048319 43048347 -60446627 + AT_rich Low_complexity Low_complexity 1 28 0 7 913 241 240 26 13 chr15 43049784 43049860 -60445114 - L1ME1 LINE L1 -245 5995 5919 7 913 273 391 19 26 chr15 43050309 43050515 -60444459 - MIR SINE MIR 0 268 65 7 913 385 282 72 31 chr15 43050965 43051188 -60443786 - L1ME1 LINE L1 -289 5890 5659 7 913 3997 213 44 84 chr15 43051179 43051400 -60443574 - RMER1C Other Other -2 1340 1103 7 913 5430 110 28 8 chr15 43051400 43052123 -60442851 - RMER19A LTR ERVK 0 737 1 7 913 3997 219 42 80 chr15 43052123 43052940 -60442034 - RMER1C Other Other -240 1102 240 7 913 225 139 0 0 chr15 43053342 43053385 -60441589 + (CATA)n Simple_repeat Simple_repeat 1 43 0 7 913 351 254 41 33 chr15 43053385 43053507 -60441467 - ORR1D1 LTR MaLR -104 270 148 8 913 318 272 0 42 chr15 43053515 43053611 -60441363 + GA-rich Low_complexity Low_complexity 4 95 0 8 913 699 208 107 6 chr15 43053620 43053789 -60441185 - ORR1D1 LTR MaLR -188 186 1 8 913 912 169 39 34 chr15 43053789 43053997 -60440977 - ORR1D1-int LTR MaLR 0 1370 1162 8 913 303 309 36 7 chr15 43054001 43054138 -60440836 - L1MD LINE L1 -1958 4188 4048 8 913 4661 164 45 27 chr15 43054145 43055007 -60439967 - RMER13B LTR ERVK -30 878 1 8 913 336 309 119 9 chr15 43055025 43055244 -60439730 - L1MD LINE L1 -2119 4027 3785 8 913 231 368 21 21 chr15 43055261 43055358 -60439616 - PB1D10 SINE Alu -20 97 1 8 913 505 324 50 25 chr15 43055358 43055754 -60439220 - L1ME1 LINE L1 -2358 3788 3383 7 913 657 318 0 0 chr15 43055781 43055957 -60439017 + B3A SINE B2 1 176 -22 8 913 663 13 0 0 chr15 43056084 43056160 -60438814 + (TC)n Simple_repeat Simple_repeat 1 76 0 8 913 795 307 52 9 chr15 43056230 43056460 -60438514 - 7SK RNA RNA -80 251 12 8 913 4948 80 22 13 chr15 43056770 43057480 -60437494 + Lx LINE L1 5931 6647 -7 8 913 4135 169 86 4 chr15 43058076 43059260 -60435714 - Lx4B LINE L1 -554 6504 5106 8 913 1757 151 4 7 chr15 43059277 43059551 -60435423 + Lx4B LINE L1 6493 6765 -293 8 913 724 186 20 20 chr15 43059551 43059699 -60435275 + ORR1D2-int LTR MaLR 1219 1366 -4 9 913 1059 253 59 23 chr15 43059703 43060006 -60434968 + ORR1D2 LTR MaLR 2 315 -55 9 913 607 265 102 52 chr15 43060248 43060559 -60434415 + L1MA9 LINE L1 5918 6246 -66 9 913 896 207 75 47 chr15 43060559 43060772 -60434202 + ID_B1 SINE B4 2 220 -4 9 913 607 265 102 52 chr15 43060772 43060803 -60434171 + L1MA9 LINE L1 6247 6277 -35 9 913 277 231 49 7 chr15 43061395 43061539 -60433435 + GA-rich Low_complexity Low_complexity 1 150 0 9 913 386 314 0 16 chr15 43061562 43061688 -60433286 + G-rich Low_complexity Low_complexity 6 129 0 9 913 419 340 44 0 chr15 43062164 43062367 -60432607 + L1M2 LINE L1 4887 5098 -1045 9 913 297 231 64 0 chr15 43063589 43063667 -60431307 - B1F SINE Alu -5 144 62 9 913 3101 158 16 56 chr15 43063924 43064548 -60430426 + Lx7 LINE L1 4488 5086 -794 9 913 392 262 128 59 chr15 43064628 43064847 -60430127 + Lx7 LINE L1 5875 6108 -1588 9 913 4019 221 111 42 chr15 43064846 43065941 -60429033 + Lx6 LINE L1 6243 7412 -48 9 913 26 0 0 0 chr15 43065988 43066014 -60428960 + AT_rich Low_complexity Low_complexity 1 26 0 9 913 23 33 0 0 chr15 43066114 43066144 -60428830 + AT_rich Low_complexity Low_complexity 1 30 0 1 913 9289 92 25 12 chr15 43066144 43067919 -60427055 - Lx3A LINE L1 0 6981 5182 1 913 8989 83 32 4 chr15 43067918 43069232 -60425742 + Lx3A LINE L1 3858 5208 -678 1 913 2831 112 132 26 chr15 43069591 43070085 -60424889 - L1_Mus4 LINE L1 -6 6630 6085 1 913 4996 127 33 5 chr15 43070104 43070926 -60424048 + L1_Mus4 LINE L1 4223 5067 -816 1 913 4241 141 7 6 chr15 43070951 43072185 -60422789 + L1VL4 LINE L1 238 1472 -2087 1 913 682 87 0 0 chr15 43072182 43072274 -60422700 + L1_Mus4 LINE L1 5623 5714 -922 1 913 7336 96 19 9 chr15 43072260 43073396 -60421578 + L1_Mus4 LINE L1 5492 6636 0 1 913 434 273 63 25 chr15 43074468 43074626 -60420348 + RSINE1 SINE B4 2 165 0 1 913 328 286 23 98 chr15 43074654 43074786 -60420188 + B1F SINE Alu 2 123 -26 1 913 300 70 0 0 chr15 43074939 43074982 -60419992 + (CATG)n Simple_repeat Simple_repeat 2 44 0 1 913 351 0 0 0 chr15 43075625 43075664 -60419310 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 913 717 106 0 0 chr15 43075664 43075777 -60419197 + (GA)n Simple_repeat Simple_repeat 1 113 0 1 913 233 167 0 20 chr15 43078143 43078192 -60416782 + L1MEe LINE L1 629 676 -4178 1 913 2560 143 135 33 chr15 43078407 43078926 -60416048 - RMER15 LTR ERVL -2 573 2 1 913 30 0 0 0 chr15 43079403 43079433 -60415541 + AT_rich Low_complexity Low_complexity 1 30 0 1 913 846 172 210 0 chr15 43079783 43079969 -60415005 - URR1A DNA MER1_type -1 225 1 1 913 282 349 71 24 chr15 43080501 43080671 -60414303 + MER58A DNA MER1_type 30 207 -17 1 913 247 210 42 68 chr15 43081427 43081564 -60413410 + L1MC4a LINE L1 7653 7882 0 1 913 1780 164 18 21 chr15 43082020 43082357 -60412617 - RLTR31A_Mm LTR ERVK -222 362 27 1 913 314 299 0 53 chr15 43083405 43083518 -60411456 - PB1D10 SINE Alu -9 108 2 1 913 2009 125 19 0 chr15 43084862 43085174 -60409800 + ORR1A3 LTR MaLR 1 318 -8 1 913 322 327 0 68 chr15 43085528 43085646 -60409328 - PB1D9 SINE Alu -8 112 3 1 913 444 77 0 0 chr15 43086818 43086883 -60408091 + ORR1A4 LTR MaLR 1 65 -264 1 913 420 331 27 7 chr15 43087155 43087301 -60407673 + RSINE1 SINE B4 4 152 -13 1 913 25 0 0 0 chr15 43087376 43087401 -60407573 + AT_rich Low_complexity Low_complexity 1 25 0 1 913 315 0 0 0 chr15 43087936 43087971 -60407003 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 913 1227 204 90 53 chr15 43089165 43089522 -60405452 + ORR1D1 LTR MaLR 5 374 0 1 913 187 283 0 21 chr15 43089732 43089779 -60405195 + MER5B DNA MER1_type 130 175 -3 1 913 183 42 0 0 chr15 43090192 43090216 -60404758 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 913 21 89 0 0 chr15 43092181 43092237 -60402737 + AT_rich Low_complexity Low_complexity 1 56 0 1 913 344 272 69 46 chr15 43093469 43093600 -60401374 + RSINE1 SINE B4 4 137 -28 1 913 283 278 19 58 chr15 43093661 43093764 -60401210 + B1_Mus1 SINE Alu 5 103 -45 1 913 867 279 133 12 chr15 43095198 43095600 -60399374 - Cheshire DNA MER1_type -349 2071 1592 1 913 534 264 232 13 chr15 43095797 43096111 -60398863 - Cheshire DNA MER1_type -1642 778 396 1 913 189 147 0 0 chr15 43096111 43096145 -60398829 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 913 32 0 0 0 chr15 43096277 43096309 -60398665 + AT_rich Low_complexity Low_complexity 1 32 0 1 913 573 261 191 12 chr15 43096509 43096750 -60398224 - MER2 DNA MER2_type 0 345 62 1 913 257 258 16 0 chr15 43096940 43097002 -60397972 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 913 1108 16 0 0 chr15 43098228 43098356 -60396618 + L1Md_F2 LINE L1 5913 6040 -542 1 913 503 15 0 0 chr15 43098356 43098421 -60396553 + L1Md_F2 LINE L1 6506 6570 -12 1 913 312 247 62 0 chr15 43098444 43098541 -60396433 + PB1D10 SINE Alu 14 116 -1 1 913 342 348 32 6 chr15 43102063 43102219 -60392755 - RSINE1 SINE B4 -4 161 2 1 913 253 344 32 11 chr15 43103348 43103442 -60391532 + PB1D7 SINE Alu 18 113 -7 1 913 237 33 0 0 chr15 43103787 43103817 -60391157 + (CAA)n Simple_repeat Simple_repeat 2 31 0 1 913 1744 212 31 40 chr15 43104564 43104986 -60389988 - MTD LTR MaLR 0 419 2 1 913 421 222 143 95 chr15 43105083 43105272 -60389702 - B3A SINE B2 0 198 1 1 913 1690 157 166 0 chr15 43105538 43105869 -60389105 - ORR1B1 LTR MaLR -8 386 1 1 913 237 272 214 26 chr15 43106294 43106411 -60388563 - MER20 DNA MER1_type -56 163 25 1 913 475 270 93 13 chr15 43106485 43106635 -60388339 + B3 SINE B2 48 209 -7 1 913 2245 91 38 3 chr15 43107443 43107784 -60387190 - L1_Mus3 LINE L1 0 6638 6286 1 913 404 179 23 23 chr15 43107784 43107870 -60387104 + B3 SINE B2 129 214 -2 1 913 261 289 44 11 chr15 43108100 43108191 -60386783 - RSINE1 SINE B4 -61 104 11 1 913 633 252 29 0 chr15 43108447 43108586 -60386388 - B1_Mur1 SINE Alu -6 143 1 1 913 249 296 88 44 chr15 43108694 43108807 -60386167 - MER5A DNA MER1_type -65 124 7 1 913 4115 114 26 30 chr15 43109149 43109837 -60385137 + Lx2 LINE L1 6313 6997 0 1 913 264 337 19 78 chr15 43110074 43110177 -60384797 + RSINE1 SINE B4 44 140 -25 1 913 234 143 0 0 chr15 43110331 43110380 -60384594 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 913 343 250 68 8 chr15 43110994 43111111 -60383863 + L1M5 LINE L1 5260 5383 -763 1 913 1137 29 0 41 chr15 43111265 43111410 -60383564 + B1_Mm SINE Alu 1 139 -8 1 913 301 232 19 29 chr15 43111684 43111792 -60383182 + B1_Mus2 SINE Alu 38 143 -6 1 913 296 264 42 83 chr15 43111913 43112033 -60382941 + PB1D10 SINE Alu 1 115 -2 1 913 218 89 64 43 chr15 43112106 43112153 -60382821 + A-rich Low_complexity Low_complexity 2 49 0 1 913 209 151 0 19 chr15 43112901 43112955 -60382019 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 913 201 316 118 80 chr15 43114470 43114707 -60380267 - L2 LINE L2 -926 2493 2248 1 913 989 225 104 84 chr15 43114777 43115181 -60379793 + MT2A LTR ERVL 1 542 -59 1 913 354 23 0 0 chr15 43115186 43115229 -60379745 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 913 2207 114 9 0 chr15 43115231 43115547 -60379427 - ORR1A2 LTR MaLR -8 319 1 1 913 198 386 53 0 chr15 43115798 43115930 -60379044 - L2 LINE L2 -1413 2006 1868 1 913 270 0 0 0 chr15 43116724 43116754 -60378220 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 913 196 318 72 43 chr15 43117105 43117174 -60377800 - L2b LINE L2 -182 3193 3123 1 913 7236 68 18 2 chr15 43117254 43118504 -60376470 - L1Md_F2 LINE L1 -12 6570 5288 1 114 34436 73 7 9 chr15 43118498 43124988 -60369986 - L1Md_F2 LINE L1 -1 6581 106 1 914 725 237 12 28 chr15 43124995 43125247 -60369727 - L1VL1 LINE L1 -6171 251 4 1 914 28600 83 7 6 chr15 43125248 43130170 -60364804 - L1Md_F LINE L1 -580 5303 379 1 914 311 244 0 49 chr15 43130315 43130397 -60364577 - ID4_ SINE ID 0 83 6 1 914 269 64 0 41 chr15 43130575 43130624 -60364350 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 1 914 2760 78 51 18 chr15 43130844 43131238 -60363736 + MTB_Mm LTR MaLR 1 407 0 1 914 269 280 96 11 chr15 43131359 43131453 -60363521 + MLT1A1 LTR MaLR 302 403 -5 1 914 356 253 0 11 chr15 43131481 43131569 -60363405 + MLT1B LTR MaLR 1 87 -303 1 914 4366 146 11 1 chr15 43131569 43132284 -60362690 - Lx4B LINE L1 -161 6897 6176 1 914 381 241 73 11 chr15 43132292 43132426 -60362548 + MTC LTR MaLR 215 421 0 1 914 1840 224 110 36 chr15 43132430 43132985 -60361989 + MTC-int LTR MaLR 5 600 -658 1 914 513 344 45 11 chr15 43134585 43134850 -60360124 - B4A SINE B4 -18 274 1 1 914 706 323 42 92 chr15 43135254 43135493 -60359481 - B4A SINE B4 -62 230 4 1 914 258 337 36 0 chr15 43135565 43135648 -60359326 - PB1D7 SINE Alu 0 120 35 1 914 189 0 0 0 chr15 43135929 43135950 -60359024 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 914 643 338 88 75 chr15 43136047 43136578 -60358396 + MLT2B3 LTR ERVL 14 551 -3 1 914 1128 78 0 0 chr15 43136718 43136859 -60358115 + B1_Mus1 SINE Alu 1 141 -7 1 914 2744 166 83 5 chr15 43136863 43137428 -60357546 + L1_Mur2 LINE L1 4964 5572 -305 1 914 1038 110 7 0 chr15 43137523 43137669 -60357305 + B1_Mus2 SINE Alu 1 147 0 1 914 214 174 0 0 chr15 43137671 43137717 -60357257 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 1 914 340 308 58 0 chr15 43137936 43138040 -60356934 + PB1D10 SINE Alu 2 111 -6 1 914 1883 53 4 35 chr15 43138152 43138406 -60356568 + L1_Mus1 LINE L1 6322 6567 0 1 914 356 295 19 19 chr15 43138957 43139064 -60355910 + B3A SINE B2 76 182 -16 1 914 23 0 0 0 chr15 43139065 43139088 -60355886 + AT_rich Low_complexity Low_complexity 1 23 0 1 914 241 246 180 0 chr15 43139644 43139705 -60355269 + ID4 SINE ID 1 72 -11 1 914 282 160 0 0 chr15 43139712 43139762 -60355212 + GA-rich Low_complexity Low_complexity 3 52 0 1 914 1064 280 56 6 chr15 43140443 43140763 -60354211 - Lx6 LINE L1 -71 7389 7054 1 914 2045 124 38 3 chr15 43140816 43141132 -60353842 + ORR1A2 LTR MaLR 1 327 0 1 914 7803 46 2 0 chr15 43141541 43142941 -60352033 - L1Md_F2 LINE L1 0 6582 5180 1 914 315 0 0 0 chr15 43143087 43143122 -60351852 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 914 975 260 29 20 chr15 43143173 43143479 -60351495 - L1MB2 LINE L1 -82 6089 5781 1 914 498 145 13 44 chr15 43143479 43143638 -60351336 + (TA)n Simple_repeat Simple_repeat 2 155 0 1 914 305 244 35 78 chr15 43143729 43143825 -60351149 - L1MB2 LINE L1 -435 5736 5644 1 914 2307 134 118 16 chr15 43143825 43144334 -60350640 + RLTR31_Mm LTR ERVK 1 561 0 1 914 305 244 35 78 chr15 43144334 43144379 -60350595 - L1MB2 LINE L1 -528 5643 5601 1 914 10006 169 46 12 chr15 43144391 43146098 -60348876 - Lx4B LINE L1 0 7058 5296 1 914 246 32 0 0 chr15 43146098 43146129 -60348845 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 2 914 10006 144 39 10 chr15 43146129 43147378 -60347596 - Lx4B LINE L1 -582 5295 3995 1 914 1045 228 78 63 chr15 43147435 43147723 -60347251 - ORR1E LTR MaLR -6 353 60 2 914 1392 175 119 55 chr15 43147723 43148068 -60346906 - ORR1B2 LTR MaLR 0 367 1 2 914 1045 228 78 63 chr15 43148068 43148098 -60346876 - ORR1E LTR MaLR -300 59 30 2 914 232 368 21 0 chr15 43148164 43148259 -60346715 + MTE-int LTR MaLR 1181 1277 -303 2 914 1139 187 178 7 chr15 43148291 43148561 -60346413 - Lx5 LINE L1 -3 7047 6732 2 914 520 261 15 8 chr15 43148572 43148703 -60346271 + MTE-int LTR MaLR 1286 1417 -163 2 914 306 314 0 21 chr15 43148731 43148850 -60346124 - ORR1E-int LTR MaLR -2 1368 1276 2 914 872 219 75 95 chr15 43149120 43149468 -60345506 + RMER10A LTR ERVL 77 417 -25 2 914 892 284 121 9 chr15 43149463 43149801 -60345173 - MTE-int LTR MaLR -131 1449 1074 2 914 22598 62 0 1 chr15 43150039 43153818 -60341156 - L1Md_F2 LINE L1 -12 6570 2794 2 914 5377 71 0 0 chr15 43153817 43154563 -60340411 + L1Md_F2 LINE L1 2057 2802 -3081 2 914 358 328 43 113 chr15 43154891 43155121 -60339853 - MLT1D LTR MaLR -271 234 21 2 914 30 45 0 0 chr15 43155206 43155250 -60339724 + AT_rich Low_complexity Low_complexity 1 44 0 2 914 839 307 48 48 chr15 43155405 43155539 -60339435 + MTEa LTR MaLR 20 161 -218 2 914 944 209 56 5 chr15 43155539 43155736 -60339238 + B3 SINE B2 3 209 -7 2 914 839 307 48 48 chr15 43155736 43155807 -60339167 + MTEa LTR MaLR 162 228 -151 2 914 3363 40 2 0 chr15 43155807 43156202 -60338772 - MTA_Mm LTR MaLR 0 396 1 2 914 839 307 48 48 chr15 43156202 43156310 -60338664 + MTEa LTR MaLR 229 334 -45 2 914 1009 192 97 9 chr15 43156369 43156668 -60338306 + ORR1B2 LTR MaLR 1 357 -10 2 914 354 313 45 8 chr15 43157449 43157581 -60337393 - MARNA DNA Mariner -424 162 26 2 914 245 293 55 41 chr15 43157958 43158104 -60336870 + MER53 DNA hAT 46 193 0 2 914 268 258 14 167 chr15 43158122 43158266 -60336708 + L1VL2 LINE L1 215 357 -6065 2 914 411 259 14 7 chr15 43158335 43158475 -60336499 + L1_Mus2 LINE L1 663 803 -5813 2 914 19847 106 14 11 chr15 43158483 43162164 -60332810 + L1_Mus2 LINE L1 725 4423 -1460 2 914 3186 16 0 11 chr15 43162164 43162535 -60332439 + IAPLTR1_Mm LTR ERVK 1 367 0 2 914 25732 34 22 5 chr15 43162537 43165834 -60329140 + IAPEz-int LTR ERVK 3 3306 -3175 2 914 780 11 0 0 chr15 43165824 43165915 -60329059 + IAPEz-int LTR ERVK 4666 4756 -1725 2 914 9613 23 2 4 chr15 43165915 43167074 -60327900 + IAPEz-int LTR ERVK 5326 6481 0 2 914 3153 16 0 11 chr15 43167074 43167445 -60327529 + IAPLTR1_Mm LTR ERVK 1 367 0 2 914 9592 94 19 9 chr15 43167445 43169585 -60325389 + L1_Mus2 LINE L1 4418 6566 0 2 914 14320 138 34 9 chr15 43169583 43173561 -60321413 - L1VL2 LINE L1 -1220 4666 394 2 914 1189 97 74 0 chr15 43173646 43173821 -60321153 - B2_Mm2 SINE B2 -7 188 1 2 914 186 302 16 0 chr15 43174103 43174166 -60320808 - L2c LINE L2 -230 3157 3094 2 914 416 338 42 14 chr15 43174401 43174545 -60320429 + RSINE1 SINE B4 4 151 -14 2 914 474 101 0 0 chr15 43174551 43174620 -60320354 + (CA)n Simple_repeat Simple_repeat 1 69 0 2 914 219 69 0 0 chr15 43174630 43174659 -60320315 + (CCA)n Simple_repeat Simple_repeat 1 29 0 2 914 587 213 109 38 chr15 43175759 43175969 -60319005 + URR1B DNA MER1_type 1 225 0 2 914 948 103 6 104 chr15 43176361 43176412 -60318562 - RMER19A LTR ERVK 0 737 702 2 914 1179 43 0 0 chr15 43176412 43176552 -60318422 + B1_Mm SINE Alu 2 141 -6 2 914 252 0 0 0 chr15 43176553 43176581 -60318393 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 2 914 948 103 6 104 chr15 43176581 43176700 -60318274 - RMER19A LTR ERVK -36 701 582 2 914 8478 30 0 0 chr15 43176711 43177701 -60317273 - L1Md_T LINE L1 0 6582 5593 2 914 2515 164 151 9 chr15 43177701 43178202 -60316772 - RMER19A LTR ERVK -129 608 1 2 914 640 284 85 25 chr15 43178423 43178658 -60316316 + Lx8 LINE L1 6840 7088 -385 2 914 314 137 0 0 chr15 43178718 43178769 -60316205 - MT2B LTR ERVL -3 598 548 2 914 212 133 0 43 chr15 43178772 43178819 -60316155 + (CATATA)n Simple_repeat Simple_repeat 1 45 0 2 914 1523 168 39 6 chr15 43178819 43179097 -60315877 - MT2B LTR ERVL -62 539 282 2 914 609 120 11 0 chr15 43179103 43179195 -60315779 - MT2B LTR ERVL -508 93 1 2 914 521 276 30 7 chr15 43179405 43179540 -60315434 + RSINE1 SINE B4 12 149 -16 2 914 22 35 0 0 chr15 43179558 43179587 -60315387 + AT_rich Low_complexity Low_complexity 1 29 0 2 914 2888 52 39 3 chr15 43181346 43181728 -60313246 + MTA_Mm LTR MaLR 1 396 0 2 914 26 0 0 0 chr15 43182105 43182131 -60312843 + AT_rich Low_complexity Low_complexity 1 26 0 2 914 3835 94 31 2 chr15 43182175 43182731 -60312243 + MT2B2 LTR ERVL 13 584 0 2 914 1021 116 7 0 chr15 43182731 43182877 -60312097 - Lx4A LINE L1 -626 6432 6286 2 914 592 180 0 0 chr15 43182868 43182968 -60312006 + Lx4A LINE L1 6078 6177 -881 2 914 890 297 14 28 chr15 43183105 43183396 -60311578 + B4 SINE B4 2 288 -4 2 914 321 26 0 0 chr15 43183411 43183449 -60311525 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 914 196 321 53 35 chr15 43183696 43183809 -60311165 + L2c LINE L2 3273 3387 0 2 914 279 140 0 0 chr15 43184014 43184064 -60310910 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 914 758 305 174 32 chr15 43184420 43184949 -60310025 - MER90a LTR ERV1 -10 604 1 2 914 267 287 195 72 chr15 43186072 43186267 -60308707 + B4 SINE B4 2 220 -72 2 914 534 70 0 0 chr15 43186305 43186376 -60308598 + (CA)n Simple_repeat Simple_repeat 1 71 0 2 914 231 225 67 75 chr15 43188030 43188150 -60306824 - RMER1C Other Other -1 1341 1223 2 914 3150 281 73 41 chr15 43188046 43188733 -60306241 - Lx8 LINE L1 0 7473 6772 2 914 3097 63 5 2 chr15 43188733 43189132 -60305842 - MTB LTR MaLR 0 400 1 2 914 3150 281 73 41 chr15 43189132 43189518 -60305456 - Lx8 LINE L1 -702 6771 6366 2 914 790 251 39 63 chr15 43190173 43190204 -60304770 - RLTR15 LTR ERVK -36 323 297 2 914 432 106 23 12 chr15 43190204 43190290 -60304684 + (TA)n Simple_repeat Simple_repeat 2 88 0 2 914 790 251 39 63 chr15 43190290 43190589 -60304385 - RLTR15 LTR ERVK -63 296 1 2 914 4941 109 22 0 chr15 43190842 43191556 -60303418 - Lx LINE L1 -329 6325 5596 2 914 267 133 0 0 chr15 43191651 43191696 -60303278 + (CAAG)n Simple_repeat Simple_repeat 2 46 0 2 914 595 257 54 37 chr15 43191719 43191986 -60302988 - Lx7 LINE L1 -336 7360 7107 2 914 1528 302 84 58 chr15 43192008 43193008 -60301966 - L1MC1 LINE L1 -18 6315 5290 2 914 291 272 31 61 chr15 43193022 43193120 -60301854 + B1F2 SINE Alu 32 126 -23 2 914 704 267 35 71 chr15 43193123 43193433 -60301541 - L1MC1 LINE L1 -849 5297 4999 2 914 2118 129 3 12 chr15 43193677 43194007 -60300967 + ORR1A2 LTR MaLR 1 327 0 2 914 4568 69 10 8 chr15 43194601 43195214 -60299760 + L1Md_F2 LINE L1 5966 6579 -3 2 914 23 0 0 29 chr15 43195237 43195253 -60299721 + AT_rich Low_complexity Low_complexity 1 16 0 2 914 796 197 7 0 chr15 43195253 43195400 -60299574 - B1_Mus1 SINE Alu 0 148 1 2 914 23 0 0 29 chr15 43195400 43195417 -60299557 + AT_rich Low_complexity Low_complexity 1 17 0 2 914 225 0 0 0 chr15 43195906 43195931 -60299043 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 2 914 275 62 62 0 chr15 43196464 43196512 -60298462 + (TTTTC)n Simple_repeat Simple_repeat 5 55 0 2 914 932 126 0 6 chr15 43197483 43197658 -60297316 + (GA)n Simple_repeat Simple_repeat 1 174 0 2 914 468 0 0 0 chr15 43197847 43197899 -60297075 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 914 290 336 101 60 chr15 43198143 43198292 -60296682 + MIR3 SINE MIR 33 187 -21 2 914 477 277 0 0 chr15 43198500 43198612 -60296362 - PB1D10 SINE Alu -5 112 1 2 914 415 297 143 34 chr15 43198715 43198924 -60296050 + MLT1L LTR MaLR 379 610 0 2 914 2681 143 27 0 chr15 43200055 43200501 -60294473 - Lx3B LINE L1 0 6973 6516 2 914 2581 267 110 22 chr15 43200523 43201395 -60293579 - Lx8 LINE L1 -2 7471 6523 2 914 23 0 0 0 chr15 43201429 43201452 -60293522 + AT_rich Low_complexity Low_complexity 1 23 0 2 914 396 0 0 0 chr15 43202148 43202192 -60292782 + (GA)n Simple_repeat Simple_repeat 1 44 0 2 914 215 259 193 73 chr15 43202427 43202577 -60292397 - L2c LINE L2 0 3387 3220 2 914 366 255 19 47 chr15 43202577 43202684 -60292290 + MIRb SINE MIR 165 268 0 2 914 330 326 61 0 chr15 43203280 43203378 -60291596 - PB1D10 SINE Alu -7 110 7 2 914 282 316 53 0 chr15 43203860 43203954 -60291020 + MTE2b LTR MaLR 1 99 -280 2 914 1811 208 47 16 chr15 43203954 43204307 -60290667 - ORR1B1 LTR MaLR 0 394 29 2 914 3397 30 0 12 chr15 43204307 43204326 -60290648 - L1Md_F2 LINE L1 0 6582 6568 2 914 234 0 0 0 chr15 43204326 43204352 -60290622 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2 914 3397 30 0 12 chr15 43204352 43204744 -60290230 - L1Md_F2 LINE L1 -15 6567 6176 2 914 3331 99 20 4 chr15 43204743 43205238 -60289736 - Lx3_Mus LINE L1 -17 6992 6490 2 914 1811 208 47 16 chr15 43205238 43205265 -60289709 - ORR1B1 LTR MaLR -366 28 2 2 914 694 236 75 21 chr15 43205269 43205455 -60289519 + MTE2b LTR MaLR 58 253 -126 2 914 748 134 7 14 chr15 43205896 43206040 -60288934 + GA-rich Low_complexity Low_complexity 3 145 0 2 914 333 362 24 0 chr15 43206062 43206189 -60288785 + B3A SINE B2 47 176 -22 2 914 197 402 9 9 chr15 43206359 43206472 -60288502 + MER5B DNA MER1_type 4 116 -62 2 914 260 214 0 14 chr15 43207778 43207849 -60287125 - HAL1 LINE L1 -166 2341 2272 2 914 22 0 0 0 chr15 43207957 43207979 -60286995 + AT_rich Low_complexity Low_complexity 1 22 0 2 914 353 254 63 8 chr15 43208117 43208244 -60286730 + Lx7 LINE L1 7563 7696 0 2 914 337 252 44 61 chr15 43208278 43208392 -60286582 + ORR1D2 LTR MaLR 226 337 -33 2 914 626 298 62 27 chr15 43208399 43208623 -60286351 - B4A SINE B4 -60 232 1 2 914 378 329 106 60 chr15 43208792 43209043 -60285931 - L1M4 LINE L1 -1212 4934 4671 2 914 3481 13 5 0 chr15 43209043 43209437 -60285537 - MTA_Mm LTR MaLR 0 396 1 2 914 378 329 106 60 chr15 43209437 43209450 -60285524 - L1M4 LINE L1 -1476 4670 4658 2 914 226 256 129 50 chr15 43209495 43209635 -60285339 - L1M2 LINE L1 -1556 4587 4437 2 914 2273 71 27 30 chr15 43209638 43209972 -60285002 - MusHAL1 LINE L1 -1058 1654 1322 2 914 714 85 0 0 chr15 43209974 43210092 -60284882 + L1_Mus4 LINE L1 6519 6636 0 2 914 22 0 0 0 chr15 43210115 43210137 -60284837 + AT_rich Low_complexity Low_complexity 1 22 0 2 914 243 0 0 0 chr15 43210259 43210286 -60284688 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 914 1308 64 0 0 chr15 43210286 43210456 -60284518 + (GA)n Simple_repeat Simple_repeat 1 171 0 2 914 630 183 7 97 chr15 43210461 43210606 -60284368 - RSINE1 SINE B4 -23 142 11 2 914 21 36 0 0 chr15 43210762 43210790 -60284184 + AT_rich Low_complexity Low_complexity 1 28 0 2 914 232 301 112 49 chr15 43211479 43211780 -60283194 - MLT1J-int LTR MaLR -900 509 132 2 914 1582 177 39 29 chr15 43212641 43212949 -60282025 - MTC LTR MaLR -8 413 103 3 914 657 193 81 103 chr15 43212948 43213133 -60281841 + B3 SINE B2 15 195 0 3 914 453 234 17 70 chr15 43213136 43213251 -60281723 - MTC LTR MaLR -298 109 1 3 914 201 108 0 0 chr15 43215032 43215069 -60279905 + (CAGA)n Simple_repeat Simple_repeat 4 40 0 3 914 204 306 105 0 chr15 43215223 43215347 -60279627 - L2 LINE L2 -751 2668 2532 3 914 426 336 35 14 chr15 43215463 43215605 -60279369 + B1F SINE Alu 5 149 0 3 914 22 0 0 0 chr15 43215702 43215724 -60279250 + AT_rich Low_complexity Low_complexity 1 22 0 3 914 611 270 39 134 chr15 43215938 43216169 -60278805 + B3 SINE B2 2 210 -6 3 914 240 59 0 0 chr15 43216293 43216327 -60278647 + (TCTG)n Simple_repeat Simple_repeat 2 35 0 3 914 295 306 73 9 chr15 43216342 43216451 -60278523 - B1F SINE Alu -31 118 3 3 914 466 264 6 153 chr15 43216451 43216558 -60278416 - ID SINE ID -141 83 2 3 914 301 286 130 0 chr15 43216570 43216647 -60278327 - PB1 SINE Alu -8 119 33 3 914 392 273 39 9 chr15 43216955 43217071 -60277903 + B3 SINE B2 2 121 -72 3 914 479 305 0 0 chr15 43217099 43217204 -60277770 + B3 SINE B2 107 211 -5 3 914 562 342 95 20 chr15 43217365 43217640 -60277334 - B4A SINE B4 0 292 3 3 914 1176 101 0 0 chr15 43219130 43219337 -60275637 + (TG)n Simple_repeat Simple_repeat 1 207 0 3 914 543 338 101 27 chr15 43219416 43219635 -60275339 - B4A SINE B4 -55 237 3 3 914 22 0 0 0 chr15 43219635 43219657 -60275317 + AT_rich Low_complexity Low_complexity 1 22 0 3 914 1024 30 0 0 chr15 43219850 43219983 -60274991 - L1Md_T LINE L1 -1 6581 6449 3 914 29 28 0 0 chr15 43220139 43220175 -60274799 + AT_rich Low_complexity Low_complexity 1 36 0 3 914 234 0 0 0 chr15 43220810 43220836 -60274138 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 914 352 299 21 0 chr15 43221484 43221581 -60273393 - ID4 SINE ID -45 107 9 3 914 1347 82 0 0 chr15 43221917 43222187 -60272787 + (CA)n Simple_repeat Simple_repeat 1 270 0 3 914 594 333 73 44 chr15 43222188 43222530 -60272444 - MER21B LTR ERV1 -111 752 401 3 914 2997 57 18 0 chr15 43222591 43222975 -60271999 - L1_Mus2 LINE L1 -1 6565 6175 3 914 742 45 0 0 chr15 43222975 43223064 -60271910 + L1_Mus2 LINE L1 6097 6185 -381 3 914 929 232 10 16 chr15 43223072 43223265 -60271709 + B3 SINE B2 25 216 0 3 914 1217 221 18 18 chr15 43224274 43224546 -60270428 - Lx4B LINE L1 -10 7048 6777 3 914 2304 298 26 10 chr15 43224537 43225216 -60269758 + Lx8 LINE L1 6204 6893 -580 3 914 1102 269 132 18 chr15 43225227 43225674 -60269300 + Lx8 LINE L1 6969 7466 -7 3 914 22 0 0 0 chr15 43225684 43225706 -60269268 + AT_rich Low_complexity Low_complexity 1 22 0 3 914 224 59 29 0 chr15 43225759 43225793 -60269181 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 914 228 205 12 25 chr15 43225911 43225991 -60268983 + (CAAA)n Simple_repeat Simple_repeat 2 80 0 3 914 226 392 121 7 chr15 43226182 43226331 -60268643 + MIR SINE MIR 20 185 -77 3 914 467 357 21 0 chr15 43226447 43226590 -60268384 - B1_Mur2 SINE Alu -2 147 2 3 914 269 294 8 92 chr15 43226485 43226605 -60268369 - MT2B LTR ERVL -338 263 154 3 914 1193 56 0 0 chr15 43226618 43226762 -60268212 - B1_Mm SINE Alu 0 147 4 3 914 225 159 0 0 chr15 43228125 43228169 -60266805 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 914 191 0 0 93 chr15 43228199 43228242 -60266732 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 3 914 1012 91 0 20 chr15 43228243 43228389 -60266585 - B1_Mus1 SINE Alu 0 148 6 3 914 369 225 0 133 chr15 43228281 43228409 -60266565 - MT2B LTR ERVL -337 264 154 3 914 449 326 7 7 chr15 43228836 43228975 -60265999 + RSINE1 SINE B4 3 141 -24 3 914 593 83 0 53 chr15 43229880 43229994 -60264980 + (GGGGA)n Simple_repeat Simple_repeat 4 111 0 3 914 186 205 25 13 chr15 43231736 43231815 -60263159 + GA-rich Low_complexity Low_complexity 1 80 0 3 914 186 133 0 0 chr15 43231998 43232028 -60262946 + (A)n Simple_repeat Simple_repeat 1 30 0 3 914 553 231 74 0 chr15 43232706 43232814 -60262160 + B1_Mur1 SINE Alu 3 118 -31 3 914 527 29 14 0 chr15 43232814 43232883 -60262091 + (CAAG)n Simple_repeat Simple_repeat 2 71 0 3 914 242 229 0 0 chr15 43233418 43233466 -60261508 - ORR1C2 LTR MaLR -332 52 5 3 914 425 330 88 30 chr15 43234072 43234319 -60260655 - B4A SINE B4 0 292 2 3 914 227 250 47 0 chr15 43236182 43236246 -60258728 + CT-rich Low_complexity Low_complexity 2 68 0 3 914 22 80 0 0 chr15 43236263 43236313 -60258661 + AT_rich Low_complexity Low_complexity 1 50 0 3 914 476 251 50 0 chr15 43236383 43236514 -60258460 + L1M4 LINE L1 5475 5620 -560 3 914 4029 175 29 1 chr15 43237889 43238754 -60256220 - L1VL4 LINE L1 -1850 1709 822 3 914 733 144 0 88 chr15 43238754 43238914 -60256060 - Lx LINE L1 -1 6653 6508 3 914 1854 204 57 0 chr15 43238914 43239207 -60255767 - L1VL4 LINE L1 -5481 821 506 3 914 278 19 302 0 chr15 43239610 43239663 -60255311 + Lx3A LINE L1 6912 6980 -1 3 914 274 289 10 10 chr15 43239843 43239941 -60255033 + (TA)n Simple_repeat Simple_repeat 1 98 0 3 914 219 88 0 0 chr15 43239983 43240017 -60254957 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 914 595 38 0 71 chr15 43240184 43240296 -60254678 - L1Md_F2 LINE L1 -2 6580 6477 3 914 577 354 60 26 chr15 43240913 43241328 -60253646 + Charlie4a DNA MER1_type 4 432 -76 3 914 658 298 69 5 chr15 43241759 43241948 -60253026 - ID_B1 SINE B4 -6 218 18 3 914 401 400 40 74 chr15 43242055 43242352 -60252622 + MamRep38 DNA hAT 1 287 -8 3 914 23 68 0 0 chr15 43242439 43242483 -60252491 + AT_rich Low_complexity Low_complexity 1 44 0 3 914 242 330 0 0 chr15 43242893 43242990 -60251984 - L1M5 LINE L1 -1146 5000 4904 3 914 21 82 0 0 chr15 43243109 43243158 -60251816 + AT_rich Low_complexity Low_complexity 1 49 0 3 914 24 53 0 0 chr15 43243416 43243454 -60251520 + AT_rich Low_complexity Low_complexity 1 38 0 3 914 2044 211 24 95 chr15 43245379 43245914 -60249060 - Lx5 LINE L1 -4 7046 6550 3 914 226 238 30 45 chr15 43246539 43246605 -60248369 - ORR1E LTR MaLR -290 69 5 3 914 285 327 9 45 chr15 43246731 43246843 -60248131 - MLT1K LTR MaLR -3 592 485 3 914 256 313 116 37 chr15 43247240 43247482 -60247492 + HAL1 LINE L1 32 292 -2215 3 914 252 298 27 76 chr15 43248026 43248216 -60246758 + Lx8 LINE L1 6061 6245 -1451 3 914 27 0 0 0 chr15 43248278 43248305 -60246669 + AT_rich Low_complexity Low_complexity 1 27 0 3 914 894 314 89 17 chr15 43248324 43248432 -60246542 - Lx8 LINE L1 -45 7428 7309 3 914 288 0 0 0 chr15 43248432 43248464 -60246510 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 914 894 314 89 17 chr15 43248464 43248714 -60246260 - Lx8 LINE L1 -165 7308 7045 3 914 378 345 17 0 chr15 43248963 43249079 -60245895 - MTEa LTR MaLR -257 122 5 3 914 3525 302 54 16 chr15 43249085 43249364 -60245610 - MTEa-int LTR MaLR -2 1578 1288 3 914 2865 128 93 4 chr15 43249364 43249849 -60245125 - RLTR11A LTR ERVK 0 528 1 3 914 3525 302 54 16 chr15 43249849 43250642 -60244332 - MTEa-int LTR MaLR -293 1287 465 3 914 1842 307 28 12 chr15 43250677 43251396 -60243578 + MYSERV6-int LTR ERVK 456 1185 -7774 3 914 337 188 0 23 chr15 43252048 43252135 -60242839 + (CATA)n Simple_repeat Simple_repeat 3 87 0 3 914 22 70 0 0 chr15 43252177 43252220 -60242754 + AT_rich Low_complexity Low_complexity 1 43 0 3 914 222 37 0 0 chr15 43252341 43252368 -60242606 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 114 9063 173 46 16 chr15 43252582 43254280 -60240694 + MYSERV16_I-int LTR ERVK 1 1749 -577 3 915 522 43 0 0 chr15 43254280 43254349 -60240625 + (GAAA)n Simple_repeat Simple_repeat 2 70 0 3 915 9063 272 88 65 chr15 43254349 43254864 -60240110 + MYSERV16_I-int LTR ERVK 1750 1858 -468 3 915 1382 248 149 8 chr15 43254864 43255254 -60239720 + BGLII_A LTR ERVK 1 445 0 3 915 501 273 240 63 chr15 43255385 43255702 -60239272 - MTEa LTR MaLR -2 377 5 3 915 607 268 7 34 chr15 43256037 43256184 -60238790 + B1_Mur1 SINE Alu 6 148 -1 3 915 1974 151 27 29 chr15 43257319 43257694 -60237280 + Lx4B LINE L1 5930 6303 -755 3 915 822 209 83 23 chr15 43257689 43257905 -60237069 + Lx4B LINE L1 6813 7041 -17 3 915 276 100 0 0 chr15 43257905 43257945 -60237029 + (TGAA)n Simple_repeat Simple_repeat 3 42 0 3 915 225 243 0 14 chr15 43257947 43258018 -60236956 - Lx6 LINE L1 -136 7324 7255 3 915 284 316 117 50 chr15 43259005 43259125 -60235849 + RSINE1 SINE B4 3 130 -35 3 915 6812 95 13 15 chr15 43259622 43260616 -60234358 - L1_Mm LINE L1 -339 5544 4553 3 915 7757 59 5 0 chr15 43260636 43261670 -60233304 + L1_Mus1 LINE L1 5588 6567 0 3 915 235 302 127 56 chr15 43262845 43262971 -60232003 - MLT1L LTR MaLR -356 254 120 3 915 25 0 0 0 chr15 43263218 43263243 -60231731 + AT_rich Low_complexity Low_complexity 1 25 0 3 915 416 307 155 25 chr15 43264760 43264965 -60230009 + MER102b DNA MER1_type 75 313 -28 3 915 231 350 64 21 chr15 43265541 43265681 -60229293 + L2a LINE L2 3280 3425 -1 3 915 6420 81 3 3 chr15 43267308 43268200 -60226774 - L1_Mm LINE L1 -2018 3865 2974 3 915 6300 41 1 8 chr15 43268200 43268968 -60226006 + L1Md_F2 LINE L1 5820 6582 0 3 915 378 0 0 0 chr15 43271500 43271542 -60223432 + (TTA)n Simple_repeat Simple_repeat 2 43 0 3 915 5543 153 29 14 chr15 43271542 43272477 -60222497 - Lx4A LINE L1 -5 7053 6105 3 915 297 282 0 0 chr15 43272549 43272620 -60222354 - ID4_ SINE ID -10 73 3 3 915 222 382 60 15 chr15 43272625 43272758 -60222216 - B1F SINE Alu -10 139 1 3 915 1196 290 44 40 chr15 43272795 43273215 -60221759 + Lx5 LINE L1 6646 7028 -22 3 915 252 0 0 0 chr15 43273215 43273243 -60221731 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 915 1147 186 47 5 chr15 43273752 43273963 -60221011 - URR1B DNA MER1_type 0 225 6 3 915 188 246 0 14 chr15 43274324 43274394 -60220580 + CT-rich Low_complexity Low_complexity 1 69 0 3 915 199 257 141 14 chr15 43274970 43275041 -60219933 + MIRb SINE MIR 52 131 -137 4 915 1147 186 47 5 chr15 43275214 43275425 -60219549 - URR1B DNA MER1_type 0 225 6 4 915 304 222 0 0 chr15 43275582 43275636 -60219338 - B1F SINE Alu 0 149 96 4 915 22 70 0 0 chr15 43278669 43278712 -60216262 + AT_rich Low_complexity Low_complexity 1 43 0 4 915 233 321 177 1 chr15 43278867 43279050 -60215924 + MIR SINE MIR 56 262 0 4 915 31 0 0 0 chr15 43279317 43279348 -60215626 + AT_rich Low_complexity Low_complexity 1 31 0 4 915 279 0 0 0 chr15 43279959 43279990 -60214984 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 915 186 133 0 0 chr15 43280042 43280072 -60214902 + (T)n Simple_repeat Simple_repeat 1 30 0 4 915 1673 168 13 29 chr15 43281129 43281441 -60213533 - ORR1B2 LTR MaLR 0 367 61 4 915 1093 198 0 5 chr15 43281449 43281647 -60213327 + RMER4A LTR ERVK 270 466 0 4 915 620 106 19 0 chr15 43281888 43281992 -60212982 - Lx9 LINE L1 -7 7637 7532 4 915 1447 174 39 23 chr15 43282015 43282321 -60212653 - Lx9 LINE L1 -242 7402 7092 4 915 188 67 33 0 chr15 43282360 43282390 -60212584 + (CAA)n Simple_repeat Simple_repeat 3 33 0 4 915 386 343 37 58 chr15 43282878 43283067 -60211907 + ID_B1 SINE B4 40 224 0 4 915 388 338 27 48 chr15 43282922 43283068 -60211906 + B1F1 SINE Alu 7 149 0 4 915 23 0 0 0 chr15 43283100 43283123 -60211851 + AT_rich Low_complexity Low_complexity 1 23 0 4 915 762 293 99 46 chr15 43283183 43283555 -60211419 - L2 LINE L2 -751 2668 2277 4 915 258 320 48 19 chr15 43283555 43283660 -60211314 - RMER15 LTR ERVL -48 527 420 4 915 376 259 105 13 chr15 43284102 43284332 -60210642 - L1MA4A LINE L1 -443 5860 5602 4 915 4646 123 29 12 chr15 43285216 43285982 -60208992 - Lx LINE L1 0 6654 5876 4 915 3506 106 8 2 chr15 43285982 43286476 -60208498 - L1_Mus4 LINE L1 -341 6295 5799 4 915 377 220 9 0 chr15 43286817 43286926 -60208048 + (TG)n Simple_repeat Simple_repeat 1 110 0 4 915 200 218 17 52 chr15 43287187 43287245 -60207729 + L4 LINE RTE 1531 1586 -443 4 915 259 307 69 10 chr15 43288192 43288294 -60206680 - MIRb SINE MIR -12 256 149 4 915 201 108 0 0 chr15 43288330 43288367 -60206607 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 4 915 769 138 13 65 chr15 43288375 43288530 -60206444 - B1_Mur3 SINE Alu -1 148 2 4 915 522 0 0 0 chr15 43289360 43289418 -60205556 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 915 357 43 0 0 chr15 43290441 43290488 -60204486 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 915 216 0 0 0 chr15 43290888 43290912 -60204062 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 4 915 315 336 37 9 chr15 43291201 43291309 -60203665 + PB1D10 SINE Alu 1 111 -6 4 915 284 122 41 0 chr15 43291560 43291609 -60203365 - L1MC4a LINE L1 -372 7510 7460 4 915 1118 75 0 70 chr15 43291610 43291782 -60203192 + B2_Mm2 SINE B2 2 161 -34 4 915 27 29 0 0 chr15 43294337 43294371 -60200603 + AT_rich Low_complexity Low_complexity 1 34 0 4 915 1117 68 0 12 chr15 43294537 43294701 -60200273 - L1Md_F2 LINE L1 -13 6569 6408 4 915 243 88 0 0 chr15 43294855 43294889 -60200085 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 915 225 0 0 0 chr15 43295540 43295565 -60199409 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 4 915 218 306 34 45 chr15 43295582 43295671 -60199303 - L2 LINE L2 -681 2738 2651 4 915 2935 27 0 0 chr15 43295702 43296039 -60198935 + IAPLTR1a_Mm LTR ERVK 1 337 0 4 915 7943 25 9 26 chr15 43296049 43297017 -60197957 + RLTR10-int LTR ERVK 41 992 -995 4 915 723 319 64 14 chr15 43297042 43297465 -60197509 + IAP-d-int LTR ERVK 707 1150 -5392 4 915 8606 22 8 1 chr15 43297547 43298535 -60196439 + RLTR10-int LTR ERVK 990 1984 -3 4 915 3241 36 8 0 chr15 43298537 43298924 -60196050 + RLTR10 LTR ERVK 1 390 0 4 915 326 376 113 17 chr15 43299194 43299494 -60195480 - MT2A LTR ERVL -178 355 27 4 915 523 159 9 9 chr15 43299677 43299791 -60195183 + GA-rich Low_complexity Low_complexity 2 115 0 4 915 6147 57 20 0 chr15 43299814 43300604 -60194370 - L1Md_F2 LINE L1 -169 5714 4909 4 915 6512 59 31 2 chr15 43300604 43301451 -60193523 + L1Md_F2 LINE L1 5712 6582 0 4 915 887 227 88 0 chr15 43301636 43301830 -60193144 - B3 SINE B2 0 216 6 4 915 1199 286 77 26 chr15 43301931 43302041 -60192933 - L1_Mur3 LINE L1 -1963 3917 3808 4 915 198 71 0 0 chr15 43302041 43302069 -60192905 + (TATG)n Simple_repeat Simple_repeat 1 28 0 4 915 1199 286 77 26 chr15 43302069 43302565 -60192409 - L1_Mur3 LINE L1 -2073 3807 3281 4 915 778 224 0 0 chr15 43302570 43302726 -60192248 - Lx3C LINE L1 -158 6818 6663 4 915 4758 126 51 6 chr15 43302730 43303554 -60191420 - RMER17D LTR ERVK -3 886 26 4 915 856 214 6 6 chr15 43303566 43303735 -60191239 - Lx4B LINE L1 -391 6667 6499 4 915 1455 122 25 21 chr15 43303729 43303972 -60191002 - Lx4B LINE L1 -1182 5876 5633 4 915 2261 149 0 0 chr15 43303980 43304342 -60190632 - Lx4B LINE L1 -1487 4390 4029 4 915 1775 163 12 41 chr15 43304345 43304665 -60190309 + ORR1C1 LTR MaLR 68 378 0 4 915 1036 314 46 35 chr15 43304694 43305472 -60189502 - L1_Rod LINE L1 -3499 2348 1562 4 915 7899 59 3 9 chr15 43305747 43307083 -60187891 - L1Md_F2 LINE L1 0 6582 5256 4 915 287 307 10 0 chr15 43307892 43307993 -60186981 + GA-rich Low_complexity Low_complexity 2 103 0 4 915 531 45 0 0 chr15 43308266 43308332 -60186642 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 915 195 42 0 0 chr15 43308586 43308610 -60186364 + (CCCCG)n Simple_repeat Simple_repeat 5 28 0 4 915 780 54 89 0 chr15 43310212 43310324 -60184650 - B1_Mus1 SINE Alu 0 148 27 4 915 191 387 0 46 chr15 43310722 43310787 -60184187 + L2b LINE L2 3265 3326 -49 4 915 225 241 108 48 chr15 43310861 43310944 -60184030 + MIR SINE MIR 60 147 -61 4 915 234 200 33 0 chr15 43311094 43311154 -60183820 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 915 483 287 117 88 chr15 43311172 43311455 -60183519 - B4A SINE B4 -1 291 1 4 915 397 344 16 16 chr15 43311735 43311918 -60183056 - Lx9 LINE L1 -390 7254 7072 4 915 582 349 38 28 chr15 43312068 43312357 -60182617 - B4A SINE B4 0 292 1 4 915 216 370 53 30 chr15 43313890 43314021 -60180953 - MIR SINE MIR -76 186 53 4 915 326 288 79 8 chr15 43314126 43314252 -60180722 - MLT1A LTR MaLR 0 374 240 4 915 32 0 0 0 chr15 43314535 43314567 -60180407 + AT_rich Low_complexity Low_complexity 1 32 0 4 915 29146 94 16 31 chr15 43314898 43316849 -60178125 - L1_Mus2 LINE L1 0 6566 4616 4 915 1048 67 0 0 chr15 43316849 43316983 -60177991 - B1_Mus1 SINE Alu 0 148 15 4 915 571 243 0 51 chr15 43316983 43317005 -60177969 - ID_B1 SINE B4 0 224 77 4 915 29146 94 16 31 chr15 43317005 43318142 -60176832 - L1_Mus2 LINE L1 0 4615 3478 4 915 180 0 0 0 chr15 43318142 43318162 -60176812 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 4 915 29146 103 20 44 chr15 43318162 43318606 -60176368 - L1_Mus2 LINE L1 -2406 3477 3010 4 915 7148 61 5 0 chr15 43318606 43319495 -60175479 - RLTR13B1 LTR ERVK 0 893 1 4 915 29146 114 16 58 chr15 43319495 43321803 -60173171 - L1_Mus2 LINE L1 -2874 3009 745 4 915 921 95 26 33 chr15 43321807 43321960 -60173014 - L1_Mus3 LINE L1 -579 6059 5908 4 915 605 258 107 48 chr15 43321968 43322293 -60172681 - L1_Mus2 LINE L1 -5777 839 559 4 915 5101 121 16 5 chr15 43322300 43323088 -60171886 - Lx LINE L1 -6 6648 5852 4 915 295 291 0 72 chr15 43323993 43324062 -60170912 - ORR1D2 LTR MaLR 0 374 314 4 915 1477 201 145 2 chr15 43324062 43324416 -60170558 + MTD LTR MaLR 1 392 -27 4 915 732 212 197 0 chr15 43324451 43324644 -60170330 - ORR1D2 LTR MaLR -139 231 1 4 915 7757 77 12 11 chr15 43324865 43326019 -60168955 - L1_Mus3 LINE L1 0 6638 5485 4 915 322 202 0 29 chr15 43326030 43326132 -60168842 + A-rich Low_complexity Low_complexity 1 99 0 4 915 327 309 0 6 chr15 43326492 43326583 -60168391 + ID4_ SINE ID 12 100 -52 4 915 210 333 107 10 chr15 43327010 43327113 -60167861 + MIR SINE MIR 40 152 -56 4 915 217 70 0 65 chr15 43328305 43328351 -60166623 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 915 3818 82 0 0 chr15 43329124 43329622 -60165352 - L1_Mus1 LINE L1 0 6567 6070 4 915 21 57 0 0 chr15 43329782 43329817 -60165157 + AT_rich Low_complexity Low_complexity 1 35 0 4 915 964 211 19 10 chr15 43329819 43330025 -60164949 - B3 SINE B2 -6 210 3 4 915 1024 183 28 43 chr15 43330735 43330946 -60164028 + B3 SINE B2 2 209 -7 4 915 465 92 0 0 chr15 43332737 43332813 -60162161 + (TG)n Simple_repeat Simple_repeat 2 77 0 4 915 242 250 47 70 chr15 43332815 43332847 -60162127 - B1F SINE Alu -1 148 115 4 915 2244 181 32 2 chr15 43332847 43333256 -60161718 - MTC LTR MaLR 0 421 1 4 915 242 241 40 139 chr15 43333256 43333324 -60161650 - B1F SINE Alu -35 114 58 4 915 525 71 0 0 chr15 43335599 43335669 -60159305 + (TG)n Simple_repeat Simple_repeat 2 71 0 4 915 716 271 32 0 chr15 43335672 43335827 -60159147 - B3A SINE B2 -38 160 1 4 915 256 350 93 52 chr15 43336064 43336236 -60158738 - MIRb SINE MIR -16 252 74 4 915 360 64 0 0 chr15 43336356 43336403 -60158571 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 4 915 962 58 43 28 chr15 43336404 43336545 -60158429 - B1_Mus1 SINE Alu 0 148 6 4 915 571 161 44 101 chr15 43336545 43336563 -60158411 - ID_B1 SINE B4 0 224 75 4 915 191 274 15 61 chr15 43336797 43336863 -60158111 + MIR3 SINE MIR 135 197 -11 4 915 279 304 39 19 chr15 43337437 43337541 -60157433 + PB1D10 SINE Alu 4 109 -8 4 915 39 68 0 0 chr15 43338624 43338698 -60156276 + AT_rich Low_complexity Low_complexity 1 74 0 4 915 198 0 0 0 chr15 43341214 43341236 -60153738 + (TTG)n Simple_repeat Simple_repeat 3 24 0 4 915 263 352 61 25 chr15 43341329 43341492 -60153482 + MIR SINE MIR 80 248 -14 4 915 29 70 0 0 chr15 43343676 43343733 -60151241 + AT_rich Low_complexity Low_complexity 1 57 0 4 915 23 0 0 0 chr15 43345148 43345171 -60149803 + AT_rich Low_complexity Low_complexity 1 23 0 4 915 660 26 0 0 chr15 43346499 43346577 -60148397 + (TTTC)n Simple_repeat Simple_repeat 3 80 0 4 915 1245 79 10 91 chr15 43346600 43346809 -60148165 - L1_Mus2 LINE L1 0 6566 6375 4 915 345 24 0 0 chr15 43347123 43347165 -60147809 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 5 915 363 23 0 0 chr15 43347627 43347671 -60147303 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 915 41206 5 0 1 chr15 43348517 43355302 -60139672 - L1Md_A LINE L1 0 6582 1 5 915 223 291 118 33 chr15 43355938 43356091 -60138883 - L3 LINE CR1 -3329 1160 995 5 915 245 286 69 92 chr15 43356286 43356417 -60138557 - B1F1 SINE Alu 0 149 22 5 915 27 73 0 0 chr15 43357323 43357378 -60137596 + AT_rich Low_complexity Low_complexity 1 55 0 5 915 21 57 0 0 chr15 43358322 43358357 -60136617 + AT_rich Low_complexity Low_complexity 1 35 0 5 915 22 0 0 0 chr15 43360453 43360475 -60134499 + AT_rich Low_complexity Low_complexity 1 22 0 5 915 21 36 0 0 chr15 43360597 43360625 -60134349 + AT_rich Low_complexity Low_complexity 1 28 0 5 915 308 255 170 38 chr15 43360644 43360803 -60134171 + L1MD LINE L1 3904 4083 -2063 5 915 243 331 37 0 chr15 43360840 43360976 -60133998 + L1MD LINE L1 4154 4294 -1852 5 915 382 347 121 23 chr15 43361078 43361385 -60133589 + L1M5 LINE L1 4526 4862 -1284 5 915 236 233 0 130 chr15 43361489 43361558 -60133416 - ID SINE ID -156 68 9 5 915 756 228 103 5 chr15 43362325 43362510 -60132464 - B3 SINE B2 -9 207 5 5 915 34 0 0 0 chr15 43363769 43363803 -60131171 + AT_rich Low_complexity Low_complexity 1 34 0 5 915 464 133 13 0 chr15 43363870 43363945 -60131029 - Lx5 LINE L1 -142 6908 6833 5 915 876 271 93 52 chr15 43364470 43364813 -60130161 + ORR1E LTR MaLR 3 359 0 5 915 2022 236 33 49 chr15 43364890 43365438 -60129536 + RLTR20A LTR ERVK 1 539 -2 5 915 447 19 0 0 chr15 43365514 43365566 -60129408 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 915 216 0 0 0 chr15 43366275 43366299 -60128675 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 915 414 287 18 9 chr15 43366857 43366966 -60128008 - PB1D10 SINE Alu -7 110 1 5 915 1335 251 206 40 chr15 43367411 43367929 -60127045 + RMER20B LTR ERVK 10 613 -14 5 915 182 245 38 0 chr15 43367940 43367993 -60126981 - L2a LINE L2 -99 3327 3273 5 915 560 203 142 31 chr15 43368172 43368299 -60126675 - B1_Mus1 SINE Alu -6 142 2 5 915 270 21 42 21 chr15 43368498 43368546 -60126428 + (TTTG)n Simple_repeat Simple_repeat 1 49 0 5 915 925 77 131 0 chr15 43368550 43368680 -60126294 - B1_Mus2 SINE Alu 0 147 1 5 915 21 0 0 0 chr15 43368943 43368964 -60126010 + AT_rich Low_complexity Low_complexity 1 21 0 5 915 233 322 80 32 chr15 43369311 43369436 -60125538 + MTE2b LTR MaLR 1 131 -248 5 915 367 316 65 98 chr15 43369324 43369601 -60125373 + MT2A LTR ERVL 18 285 -248 5 915 2853 243 57 66 chr15 43369618 43371046 -60123928 - Lx5 LINE L1 -309 6741 5346 5 915 278 206 59 0 chr15 43371254 43371322 -60123652 - MTD LTR MaLR -344 75 4 5 915 330 294 121 29 chr15 43371497 43371637 -60123337 + MTEb-int LTR MaLR 15 167 -1413 5 915 330 345 0 45 chr15 43371688 43371776 -60123198 + B4A SINE B4 45 128 -164 5 915 263 308 37 37 chr15 43371807 43371915 -60123059 + MTEb-int LTR MaLR 1127 1234 -346 5 915 414 295 98 0 chr15 43371975 43372087 -60122887 - RSINE1 SINE B4 -38 127 5 5 915 825 304 49 23 chr15 43372085 43372435 -60122539 + MTEb-int LTR MaLR 1210 1568 -12 5 915 618 297 61 108 chr15 43372423 43372801 -60122173 + MTEb LTR MaLR 20 379 0 5 915 1863 51 0 4 chr15 43373933 43374168 -60120806 - L1_Mus2 LINE L1 0 6566 6333 5 915 1081 70 0 14 chr15 43374168 43374313 -60120661 + L1_Mus2 LINE L1 6179 6321 -245 5 915 1594 240 130 1 chr15 43375453 43375894 -60119080 + Lx6 LINE L1 6736 7217 -243 5 915 218 267 183 0 chr15 43376254 43376314 -60118660 - L2a LINE L2 -1 3425 3355 5 915 417 219 30 17 chr15 43377374 43377617 -60117357 + (CA)n Simple_repeat Simple_repeat 1 246 0 5 915 273 186 39 34 chr15 43377630 43377808 -60117166 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 915 368 280 113 14 chr15 43377974 43378195 -60116779 - L1MA4 LINE L1 -24 6276 6034 5 915 216 326 11 0 chr15 43379210 43379299 -60115675 + GA-rich Low_complexity Low_complexity 2 91 0 5 915 639 0 0 0 chr15 43379397 43379468 -60115506 + (TCC)n Simple_repeat Simple_repeat 2 72 0 5 915 495 0 0 0 chr15 43379468 43379523 -60115451 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 915 4961 115 25 5 chr15 43379538 43380296 -60114678 - Lx3C LINE L1 -5 6971 6199 5 915 276 30 0 0 chr15 43380584 43380617 -60114357 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 915 307 343 64 25 chr15 43380685 43380888 -60114086 - L1M5 LINE L1 -299 5825 5615 5 915 646 185 93 46 chr15 43381318 43381474 -60113500 - ORR1C2 LTR MaLR 0 384 218 5 915 714 24 0 0 chr15 43381474 43381558 -60113416 + (GA)n Simple_repeat Simple_repeat 1 84 0 5 915 346 261 246 74 chr15 43381558 43381616 -60113358 - ORR1C2 LTR MaLR -153 217 119 5 915 2077 104 39 3 chr15 43381618 43381926 -60113048 - ORR1A2 LTR MaLR -8 319 1 5 915 605 197 0 14 chr15 43381928 43382070 -60112904 - ORR1C2 LTR MaLR -263 131 1 5 915 239 325 39 0 chr15 43382184 43382261 -60112713 - ID_B1 SINE B4 -49 175 96 5 915 598 219 194 6 chr15 43382474 43382644 -60112330 - B3 SINE B2 -14 202 1 5 915 25 0 0 0 chr15 43383111 43383136 -60111838 + AT_rich Low_complexity Low_complexity 1 25 0 5 915 969 220 180 47 chr15 43383183 43383483 -60111491 + MTEb LTR MaLR 1 340 -39 5 915 412 303 89 32 chr15 43383592 43383749 -60111225 + LTR40a LTR ERVL 1 166 -353 5 915 781 324 51 37 chr15 43383867 43384162 -60110812 + MER2 DNA MER2_type 8 306 -39 5 916 255 153 12 68 chr15 43384875 43385036 -60109938 + A-rich Low_complexity Low_complexity 5 156 0 5 916 2056 304 74 43 chr15 43385036 43385507 -60109467 - Lx7 LINE L1 -363 7333 6848 5 916 453 19 0 0 chr15 43385507 43385561 -60109413 + (CCA)n Simple_repeat Simple_repeat 3 56 0 5 916 2056 304 74 43 chr15 43385561 43385883 -60109091 - Lx7 LINE L1 -849 6847 6515 5 916 383 308 0 0 chr15 43386167 43386271 -60108703 - Lx7 LINE L1 -1227 6469 6366 5 916 1779 222 5 53 chr15 43386285 43386665 -60108309 - ORR1D1 LTR MaLR -12 362 1 5 916 2119 273 46 25 chr15 43386668 43387455 -60107519 - Lx7 LINE L1 -1332 6364 5567 5 916 502 185 0 25 chr15 43387456 43387489 -60107485 + polypyrimidine Low_complexity Low_complexity 90 122 0 5 916 1055 127 6 0 chr15 43387489 43387662 -60107312 + (TTTC)n Simple_repeat Simple_repeat 4 177 0 5 916 502 185 0 25 chr15 43387662 43387698 -60107276 + polypyrimidine Low_complexity Low_complexity 55 89 0 5 916 1141 91 11 6 chr15 43387698 43387875 -60107099 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 5 916 502 185 0 25 chr15 43387875 43387926 -60107048 + polypyrimidine Low_complexity Low_complexity 4 54 0 5 916 6416 223 111 32 chr15 43387932 43388442 -60106532 - Lx7 LINE L1 -309 5571 5052 5 916 6294 15 25 0 chr15 43388442 43389177 -60105797 - L1Md_F3 LINE L1 0 6584 5832 5 916 6416 223 111 32 chr15 43389177 43389394 -60105580 - Lx7 LINE L1 -829 5051 4802 5 916 351 0 0 0 chr15 43389394 43389433 -60105541 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 916 6416 223 111 32 chr15 43389433 43390752 -60104222 - Lx7 LINE L1 -1079 4801 3364 5 916 2270 80 27 6 chr15 43390754 43391082 -60103892 + L1_Mus3 LINE L1 6303 6637 -1 5 916 1658 225 93 11 chr15 43391077 43391612 -60103362 - Lx7 LINE L1 -2507 3373 2795 5 916 2233 266 31 25 chr15 43391643 43392225 -60102749 - Lx7 LINE L1 -3827 2053 1474 5 916 1896 195 81 10 chr15 43392225 43392618 -60102356 - MTC LTR MaLR 0 421 1 5 916 2233 288 44 23 chr15 43392618 43393086 -60101888 - Lx7 LINE L1 -4407 1473 984 5 916 3979 176 87 30 chr15 43393236 43394048 -60100926 - RMER13A LTR ERVK -1 859 1 5 916 1261 316 45 72 chr15 43394348 43394877 -60100097 - MER119 DNA MER1_type -17 566 52 5 916 265 264 27 27 chr15 43394904 43394978 -60099996 - MIRc SINE MIR -186 82 9 5 916 198 0 0 0 chr15 43395118 43395140 -60099834 + (T)n Simple_repeat Simple_repeat 1 22 0 5 916 388 292 7 71 chr15 43396532 43396672 -60098302 - MTEb LTR MaLR -248 131 1 5 916 1763 142 68 57 chr15 43397055 43397406 -60097568 - ORR1B2 LTR MaLR -10 357 3 5 916 480 345 142 40 chr15 43397430 43397732 -60097242 - MLT1E1A LTR MaLR -14 666 278 5 916 276 305 0 35 chr15 43397984 43398069 -60096905 + PB1D10 SINE Alu 36 117 0 5 916 254 127 27 27 chr15 43398142 43398215 -60096759 + (TA)n Simple_repeat Simple_repeat 2 74 0 5 916 445 343 46 38 chr15 43398225 43398464 -60096510 + MLT1C LTR MaLR 171 411 -56 5 916 252 118 0 56 chr15 43398744 43398816 -60096158 - MT2A LTR ERVL 0 533 466 5 916 522 83 0 0 chr15 43398816 43398888 -60096086 + (TA)n Simple_repeat Simple_repeat 2 73 0 5 916 1047 214 105 114 chr15 43398893 43399308 -60095666 - MT2A LTR ERVL -41 560 1 5 916 3104 158 44 12 chr15 43399383 43399948 -60095026 - RMER4B LTR ERVK 0 585 3 5 916 7272 118 23 5 chr15 43399974 43401989 -60092985 + L1_Mus3 LINE L1 4840 6638 0 5 916 387 0 0 0 chr15 43402118 43402161 -60092813 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 916 291 368 21 0 chr15 43402630 43402725 -60092249 - PB1D10 SINE Alu -19 98 2 5 916 542 136 8 0 chr15 43402760 43402878 -60092096 + (TC)n Simple_repeat Simple_repeat 2 120 0 5 916 462 61 0 0 chr15 43403230 43403296 -60091678 + (TC)n Simple_repeat Simple_repeat 1 66 0 5 916 186 43 0 0 chr15 43403296 43403319 -60091655 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 916 676 293 6 0 chr15 43403323 43403480 -60091494 - B3 SINE B2 -57 159 2 5 916 1039 62 0 0 chr15 43404279 43404423 -60090551 + L1Md_A LINE L1 6439 6582 0 5 916 4626 82 35 8 chr15 43404551 43405203 -60089771 - Lx3_Mus LINE L1 -8 7001 6332 5 916 19892 82 129 1 chr15 43405203 43409155 -60085819 - L1Md_T LINE L1 -2 6580 2074 5 916 7443 83 4 0 chr15 43409169 43410265 -60084709 - L1_Mus1 LINE L1 0 6567 5468 5 916 429 143 0 25 chr15 43410264 43410343 -60084631 + L1_Mur2 LINE L1 5284 5360 -517 5 916 3609 97 114 0 chr15 43410337 43410925 -60084049 - L1_Mur1 LINE L1 -3800 2086 1432 5 916 2810 166 20 25 chr15 43410924 43411722 -60083252 + L1_Mur1 LINE L1 158 1344 -5640 5 916 1148 82 7 0 chr15 43411737 43411883 -60083091 + B1_Mus2 SINE Alu 1 147 0 5 916 276 53 0 0 chr15 43411888 43411926 -60083048 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 5 916 475 144 0 11 chr15 43411926 43412017 -60082957 + L1_Mur1 LINE L1 1333 1422 -4464 5 916 183 354 127 0 chr15 43413821 43413979 -60080995 + MIR SINE MIR 20 197 -65 5 916 2947 226 35 20 chr15 43415115 43415769 -60079205 + RMER1C Other Other 560 1223 -119 5 916 185 266 11 0 chr15 43415773 43415867 -60079107 + CT-rich Low_complexity Low_complexity 2 96 0 5 916 496 185 47 88 chr15 43415867 43416015 -60078959 + RMER1C Other Other 1199 1340 -2 5 916 445 379 0 0 chr15 43416037 43416182 -60078792 + Lx8 LINE L1 7170 7314 -159 5 916 183 212 35 0 chr15 43416203 43416288 -60078686 + (TA)n Simple_repeat Simple_repeat 2 89 0 6 916 776 263 118 91 chr15 43416488 43416939 -60078035 - RMER4A LTR ERVK -3 463 1 6 916 405 272 96 10 chr15 43418122 43418226 -60076748 + RSINE1 SINE B4 5 117 -48 6 916 279 0 0 0 chr15 43418226 43418257 -60076717 + (CAGA)n Simple_repeat Simple_repeat 1 31 0 6 916 261 0 0 0 chr15 43418262 43418291 -60076683 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 6 916 325 347 49 16 chr15 43418329 43418452 -60076522 - ID_B1 SINE B4 -10 214 88 6 916 237 216 13 51 chr15 43418981 43419059 -60075915 + CT-rich Low_complexity Low_complexity 4 78 0 6 916 582 311 112 30 chr15 43419486 43419817 -60075157 + ORR1E LTR MaLR 1 358 -1 6 916 21 0 0 0 chr15 43420153 43420174 -60074800 + AT_rich Low_complexity Low_complexity 1 21 0 6 916 195 321 88 88 chr15 43420684 43420831 -60074143 + MIRb SINE MIR 84 230 -38 6 916 262 305 25 43 chr15 43421608 43421769 -60073205 + CT-rich Low_complexity Low_complexity 4 161 0 6 916 226 259 0 0 chr15 43421729 43421783 -60073191 + T-rich Low_complexity Low_complexity 1 54 0 6 916 573 219 14 55 chr15 43422150 43422295 -60072679 + ORR1D2 LTR MaLR 230 368 -2 6 916 23 68 0 0 chr15 43422475 43422519 -60072455 + AT_rich Low_complexity Low_complexity 1 44 0 6 916 1669 198 24 73 chr15 43422526 43422853 -60072121 + ORR1D1 LTR MaLR 1 325 -49 6 916 3306 83 31 8 chr15 43422853 43423329 -60071645 + L1_Mus3 LINE L1 6146 6632 -6 6 916 1669 198 24 73 chr15 43423329 43423382 -60071592 + ORR1D1 LTR MaLR 326 362 -12 6 916 351 0 0 0 chr15 43423935 43423974 -60071000 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 916 35232 36 0 0 chr15 43424639 43429881 -60065093 + L1Md_T LINE L1 251 5589 -297 6 916 9005 4 0 0 chr15 43429881 43430877 -60064097 + L1Md_T LINE L1 5590 6585 0 6 916 1391 234 30 10 chr15 43430877 43430920 -60064054 + L1M1 LINE L1 5616 5667 -633 6 916 1896 132 29 13 chr15 43430976 43431290 -60063684 - ORR1A2 LTR MaLR -8 319 1 6 916 342 80 0 0 chr15 43431580 43431630 -60063344 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 916 4244 126 108 13 chr15 43431741 43431832 -60063142 - L1_Mur2 LINE L1 -919 4958 4868 6 916 1070 105 12 0 chr15 43431832 43432003 -60062971 + (TTTC)n Simple_repeat Simple_repeat 1 173 0 6 916 4244 126 108 13 chr15 43432003 43432210 -60062764 - L1_Mur2 LINE L1 -1010 4867 4646 6 916 3133 73 2 0 chr15 43432210 43432609 -60062365 - MTB LTR MaLR 0 400 1 6 916 4244 126 108 13 chr15 43432609 43433087 -60061887 - L1_Mur2 LINE L1 -1232 4645 4109 6 916 2155 156 3 3 chr15 43433075 43433442 -60061532 + L1_Mur2 LINE L1 4930 5296 -581 6 916 5735 171 28 9 chr15 43433441 43434466 -60060508 + Lx2B LINE L1 5851 6895 -105 6 916 1703 201 9 32 chr15 43434453 43434479 -60060495 - L1_Mur2 LINE L1 -4241 1636 1611 6 916 360 0 0 0 chr15 43434479 43434519 -60060455 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 6 916 1703 222 10 62 chr15 43434519 43435286 -60059688 - L1_Mur2 LINE L1 -4267 1610 892 6 916 1369 49 0 11 chr15 43435935 43436122 -60058852 - L1Md_F3 LINE L1 0 6584 6400 6 916 204 381 33 39 chr15 43436195 43436348 -60058626 + L2a LINE L2 2072 2223 -1196 6 916 228 135 0 0 chr15 43436414 43436451 -60058523 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 916 258 355 49 7 chr15 43437240 43437382 -60057592 + L2a LINE L2 3259 3406 -20 6 916 180 300 83 0 chr15 43437551 43437611 -60057363 + MIR SINE MIR 86 150 -58 6 916 27 0 0 0 chr15 43438407 43438434 -60056540 + AT_rich Low_complexity Low_complexity 1 27 0 6 916 294 203 79 26 chr15 43438734 43438810 -60056164 - B4 SINE B4 -207 85 6 6 916 420 311 78 50 chr15 43439586 43439913 -60055061 - RLTR17 LTR ERVK -265 427 32 6 916 1033 283 79 41 chr15 43439963 43440405 -60054569 - Lx8 LINE L1 -2 7471 7013 6 916 489 323 93 43 chr15 43440763 43441206 -60053768 - MLT1C LTR MaLR 0 390 1 6 916 226 286 70 14 chr15 43441459 43441530 -60053444 - MER5A1 DNA MER1_type -38 128 54 6 916 719 266 201 21 chr15 43441555 43441920 -60053054 - MLT2B4 LTR ERVL -61 495 2 6 916 238 429 20 10 chr15 43441922 43442122 -60052852 - MIR SINE MIR -29 233 32 6 916 1797 216 16 0 chr15 43442978 43443344 -60051630 - ORR1D1 LTR MaLR -2 372 1 6 916 2171 178 22 14 chr15 43443388 43443805 -60051169 - MTC LTR MaLR 0 421 2 6 916 290 312 68 53 chr15 43444332 43444464 -60050510 + ORSL-2b DNA Tip100 4 137 -371 6 916 607 384 48 4 chr15 43444631 43444882 -60050092 + B4A SINE B4 3 264 -28 6 916 552 56 0 0 chr15 43444890 43444962 -60050012 + (CA)n Simple_repeat Simple_repeat 2 73 0 6 916 224 254 0 45 chr15 43444978 43445044 -60049930 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 6 916 459 0 0 0 chr15 43445146 43445197 -60049777 + (TTA)n Simple_repeat Simple_repeat 3 53 0 6 916 201 265 0 150 chr15 43447178 43447258 -60047716 - MIR SINE MIR -103 105 38 6 916 310 288 47 64 chr15 43447804 43447975 -60046999 - L1MA8 LINE L1 -5 6286 6119 6 916 234 0 0 0 chr15 43448148 43448174 -60046800 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 6 916 366 23 0 0 chr15 43448235 43448278 -60046696 + (GGA)n Simple_repeat Simple_repeat 3 45 0 6 916 234 242 0 0 chr15 43448278 43448344 -60046630 + (CGA)n Simple_repeat Simple_repeat 1 66 0 6 916 200 349 71 54 chr15 43448609 43448721 -60046253 + MIRb SINE MIR 40 153 -115 6 916 21 0 0 0 chr15 43448824 43448845 -60046129 + AT_rich Low_complexity Low_complexity 1 21 0 6 916 630 304 14 4 chr15 43448845 43449041 -60045933 + B3A SINE B2 13 214 -2 6 916 6983 165 7 2 chr15 43449062 43450434 -60044540 - Lx2B LINE L1 -954 6046 4669 6 916 438 275 36 7 chr15 43450432 43450571 -60044403 + Lx2B LINE L1 6845 6987 -13 6 916 1136 251 74 37 chr15 43450732 43451083 -60043891 - ORR1D2 LTR MaLR -3 367 4 6 916 1329 199 19 60 chr15 43451241 43451605 -60043369 - Lx9 LINE L1 -2 7642 7294 6 916 517 215 99 0 chr15 43451634 43451755 -60043219 + Lx9 LINE L1 7114 7246 -398 6 916 417 171 209 7 chr15 43452193 43452346 -60042628 - Lx9 LINE L1 0 7644 7461 6 916 1119 192 33 8 chr15 43452332 43452573 -60042401 + Lx9 LINE L1 6920 7166 -478 6 916 414 0 0 0 chr15 43453490 43453536 -60041438 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 6 916 292 184 114 11 chr15 43454134 43454222 -60040752 - L1MD2 LINE L1 -1989 4555 4459 6 916 243 273 15 0 chr15 43454487 43454553 -60040421 - L1MD2 LINE L1 -6463 84 18 6 916 813 187 30 6 chr15 43455879 43456046 -60038928 + URR1A DNA MER1_type 56 226 0 6 916 24 53 0 0 chr15 43456441 43456479 -60038495 + AT_rich Low_complexity Low_complexity 1 38 0 6 916 303 28 0 0 chr15 43456956 43456992 -60037982 + (TTTTC)n Simple_repeat Simple_repeat 2 37 0 6 916 1123 66 0 0 chr15 43456992 43457129 -60037845 - B1_Mm SINE Alu -9 138 2 6 916 189 0 0 0 chr15 43457174 43457195 -60037779 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 6 916 285 378 59 55 chr15 43457489 43457727 -60037247 + Lx8 LINE L1 7056 7294 -179 6 916 1932 169 45 3 chr15 43457791 43458166 -60036808 - Lx2 LINE L1 -530 5347 4957 6 916 8419 144 11 13 chr15 43458166 43459790 -60035184 + Lx2 LINE L1 5379 6996 -1 6 916 6665 121 31 23 chr15 43459812 43460991 -60033983 - L1_Mur2 LINE L1 -2220 3657 2469 6 916 22214 48 1 3 chr15 43460989 43464263 -60030711 + L1Md_F2 LINE L1 3097 6358 -224 6 916 532 276 47 16 chr15 43464634 43464763 -60030211 - ETnERV2-int LTR ERVK -204 7202 7070 6 916 1843 48 8 60 chr15 43464764 43465030 -60029944 + L1Md_F3 LINE L1 6332 6583 -1 6 916 2979 156 4 13 chr15 43465069 43465467 -60029507 - L1_Mur2 LINE L1 -3427 2450 2056 6 916 288 0 0 0 chr15 43465467 43465499 -60029475 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 916 2979 156 4 13 chr15 43465499 43465638 -60029336 - L1_Mur2 LINE L1 -3822 2055 1918 6 916 340 263 50 0 chr15 43466035 43466134 -60028840 + MIR SINE MIR 156 259 -3 6 916 448 209 9 0 chr15 43466616 43466721 -60028253 - Lx9 LINE L1 -34 7610 7505 6 916 293 398 107 8 chr15 43466862 43467125 -60027849 + L4 LINE RTE 979 1267 -762 6 916 245 294 15 0 chr15 43467172 43467240 -60027734 - ID2 SINE ID -13 70 2 6 916 677 303 0 0 chr15 43467681 43467823 -60027151 - RSINE1 SINE B4 -20 145 4 6 916 211 356 0 0 chr15 43467850 43467923 -60027051 + CT-rich Low_complexity Low_complexity 4 76 0 6 916 353 265 139 17 chr15 43467923 43468161 -60026813 - L1MA9 LINE L1 -9 6303 6037 6 916 617 281 112 51 chr15 43468238 43468663 -60026311 - MLT1A1 LTR MaLR -1 407 4 6 916 3611 185 82 11 chr15 43468678 43469389 -60025585 + RLTR25B LTR ERVK 1 761 -267 6 916 4998 14 0 0 chr15 43470575 43471141 -60023833 - L1Md_A LINE L1 0 6582 6017 6 916 538 361 124 2 chr15 43471257 43471701 -60023273 + L2 LINE L2 2340 2837 -582 6 916 396 0 0 0 chr15 43472030 43472074 -60022900 + (TA)n Simple_repeat Simple_repeat 1 44 0 6 916 262 283 66 47 chr15 43472858 43472982 -60021992 - MLT1H LTR MaLR -375 174 45 6 916 213 157 40 67 chr15 43473272 43473347 -60021627 + T-rich Low_complexity Low_complexity 2 74 0 6 916 1941 194 79 11 chr15 43474213 43474349 -60020625 + RLTR20B3 LTR ERVK 106 242 -335 6 916 363 44 0 0 chr15 43474349 43474394 -60020580 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 916 1941 194 79 11 chr15 43474394 43474606 -60020368 + RLTR20B3 LTR ERVK 243 470 -107 6 916 366 23 0 0 chr15 43474606 43474649 -60020325 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 916 1941 194 79 11 chr15 43474649 43474741 -60020233 + RLTR20B3 LTR ERVK 471 575 -2 6 916 416 195 26 26 chr15 43475200 43475316 -60019658 - MER121 Unknown Unknown -232 180 65 6 916 7649 62 5 1 chr15 43476091 43477380 -60017594 - L1Md_F2 LINE L1 -10 6572 5278 6 916 220 277 0 0 chr15 43477407 43477454 -60017520 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 916 232 253 0 185 chr15 43477455 43477547 -60017427 - RSINE1 SINE B4 0 165 91 6 916 321 26 0 0 chr15 43477562 43477600 -60017374 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 916 302 316 20 0 chr15 43477632 43477730 -60017244 + PB1D10 SINE Alu 5 104 -13 6 916 621 40 0 0 chr15 43478651 43478727 -60016247 + (TC)n Simple_repeat Simple_repeat 1 76 0 6 916 2480 48 19 0 chr15 43478924 43479239 -60015735 + L1Md_F3 LINE L1 6250 6570 -14 6 916 716 205 23 40 chr15 43479264 43479437 -60015537 - RLTR16 LTR ERVK -335 170 1 7 916 462 360 51 17 chr15 43480948 43481185 -60013789 + MER121 Unknown Unknown 160 404 -8 7 916 861 234 52 5 chr15 43481563 43481756 -60013218 + B3 SINE B2 9 210 -6 7 916 367 287 122 63 chr15 43482945 43483198 -60011776 + MTEb LTR MaLR 1 268 -111 7 916 452 333 87 66 chr15 43483077 43483469 -60011505 + MT2A LTR ERVL 134 533 0 7 916 237 289 0 0 chr15 43483595 43483647 -60011327 - ID4 SINE ID -13 70 19 7 916 216 0 0 0 chr15 43483862 43483886 -60011088 + (A)n Simple_repeat Simple_repeat 1 24 0 7 916 242 353 78 0 chr15 43484208 43484310 -60010664 + MT2A LTR ERVL 316 425 -108 7 916 3599 5 0 0 chr15 43484975 43485377 -60009597 + L1Md_A LINE L1 5185 5586 -297 7 916 9017 3 0 0 chr15 43485377 43486373 -60008601 + L1Md_A LINE L1 5587 6582 0 7 916 2464 99 67 10 chr15 43487660 43488049 -60006925 - RLTR10A LTR ERVK 0 411 1 7 916 8566 97 29 17 chr15 43488431 43490472 -60004502 + L1_Mus3 LINE L1 4578 6638 0 7 916 941 133 0 27 chr15 43491859 43492044 -60002930 + CT-rich Low_complexity Low_complexity 1 180 0 7 916 242 0 61 0 chr15 43493153 43493186 -60001788 + (TATAA)n Simple_repeat Simple_repeat 5 39 0 7 916 832 308 98 9 chr15 43493227 43493542 -60001432 - MER2 DNA MER2_type -1 344 2 7 916 205 362 55 8 chr15 43496024 43496152 -59998822 + MIR SINE MIR 129 262 0 7 916 378 350 86 88 chr15 43496525 43496967 -59998007 - MER21B LTR ERV1 -11 852 412 7 916 2941 196 127 3 chr15 43497038 43497694 -59997280 - RMER19A LTR ERVK 0 737 1 7 916 395 188 21 0 chr15 43497721 43497817 -59997157 + CT-rich Low_complexity Low_complexity 1 98 0 7 916 247 359 13 0 chr15 43497817 43497895 -59997079 - ID SINE ID -141 83 5 7 916 266 326 62 8 chr15 43498414 43498544 -59996430 + MIRb SINE MIR 117 253 -15 7 916 434 263 32 0 chr15 43499025 43499120 -59995854 - B3A SINE B2 -67 131 34 7 916 3379 196 118 28 chr15 43499200 43499997 -59994977 + RMER13B LTR ERVK 1 869 -39 7 916 4249 102 4 3 chr15 43500194 43500954 -59994020 + Lx2 LINE L1 5214 5974 -1023 1 916 570 139 61 0 chr15 43500954 43501069 -59993905 + Lx2 LINE L1 6875 6996 -1 1 916 897 280 27 11 chr15 43501090 43501350 -59993624 + Lx9 LINE L1 7109 7372 -272 2 916 1087 57 0 0 chr15 43501352 43501492 -59993482 + B1_Mus1 SINE Alu 9 148 0 3 916 935 75 0 8 chr15 43501493 43501627 -59993347 + (GAAAA)n Simple_repeat Simple_repeat 3 135 0 4 916 767 79 0 10 chr15 43501627 43501729 -59993245 + L1_Mus1 LINE L1 6335 6435 -132 5 916 687 69 8 8 chr15 43501853 43501970 -59993004 + L1Md_F2 LINE L1 6466 6582 0 6 916 261 281 154 10 chr15 43502179 43502283 -59992691 + PB1D7 SINE Alu 1 119 -1 7 916 180 0 0 0 chr15 43502616 43502636 -59992338 + (CA)n Simple_repeat Simple_repeat 1 20 0 8 916 236 238 198 12 chr15 43503306 43503387 -59991587 - MIRc SINE MIR -124 144 49 9 916 3355 186 123 28 chr15 43503387 43504314 -59990660 + RLTR25B LTR ERVK 40 959 -144 1 916 522 0 0 0 chr15 43504314 43504372 -59990602 + (GA)n Simple_repeat Simple_repeat 2 59 0 1 916 2576 241 98 92 chr15 43504372 43504499 -59990475 + RLTR25B LTR ERVK 960 1099 -4 1 916 536 315 16 87 chr15 43504557 43504741 -59990233 - B4A SINE B4 -120 172 2 1 916 841 144 21 21 chr15 43504782 43504924 -59990050 + B1_Mur4 SINE Alu 9 150 0 1 916 23 0 0 0 chr15 43506614 43506637 -59988337 + AT_rich Low_complexity Low_complexity 1 23 0 1 916 405 0 0 0 chr15 43506637 43506682 -59988292 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 916 324 120 0 0 chr15 43506709 43506759 -59988215 + (A)n Simple_repeat Simple_repeat 1 50 0 1 916 507 264 15 53 chr15 43506841 43506973 -59988001 + RSINE1 SINE B4 22 148 -17 1 916 204 143 0 0 chr15 43506988 43507030 -59987944 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 916 2446 164 126 2 chr15 43507502 43507961 -59987013 + RMER20A LTR ERVK 1 516 0 1 916 422 306 48 34 chr15 43509284 43509477 -59985497 + MLT1H2 LTR MaLR 66 307 -242 2 916 286 295 15 30 chr15 43509820 43509953 -59985021 + (TATG)n Simple_repeat Simple_repeat 1 131 0 2 916 293 0 27 0 chr15 43510026 43510063 -59984911 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 916 1108 260 42 108 chr15 43510468 43510921 -59984053 + RLTR23 LTR ERV1 8 430 0 2 916 271 179 12 37 chr15 43512144 43512225 -59982749 - L1ME4a LINE L1 -3 6121 6043 2 916 3816 127 71 41 chr15 43512408 43513122 -59981852 - RMER6A LTR ERVK -2 754 19 2 916 389 88 79 105 chr15 43513125 43513201 -59981773 - RMER6B LTR ERVK -387 74 1 2 916 1143 224 127 26 chr15 43513272 43513612 -59981362 + ORR1D1 LTR MaLR 1 374 0 2 916 548 278 68 23 chr15 43513649 43513826 -59981148 + RMER5 LTR ERV1 1 185 -349 2 916 526 280 89 6 chr15 43514482 43514651 -59980323 + RMER5 LTR ERV1 342 524 -10 2 916 446 58 0 28 chr15 43514958 43515029 -59979945 + (CAAAA)n Simple_repeat Simple_repeat 2 70 0 2 916 335 339 141 17 chr15 43515203 43515437 -59979537 + MamGypLTR1a LTR Gypsy 4 266 -518 3 916 227 379 67 60 chr15 43515544 43515693 -59979281 + MamGypLTR1a LTR Gypsy 395 544 -240 3 917 228 250 204 0 chr15 43517185 43517273 -59977701 + MLT1D LTR MaLR 104 209 -296 3 917 596 170 15 14 chr15 43517291 43517422 -59977552 + MLT1D LTR MaLR 346 505 0 3 917 2717 60 3 0 chr15 43517719 43518071 -59976903 - L1_Mm LINE L1 -581 5302 4950 3 917 817 294 42 44 chr15 43518071 43518431 -59976543 - RLTR10D LTR ERVK 0 359 1 3 917 5129 67 3 0 chr15 43518431 43519105 -59975869 - L1_Mm LINE L1 -928 4955 4280 3 917 2295 84 7 0 chr15 43519103 43519401 -59975573 + L1Md_F2 LINE L1 5286 5585 -298 3 917 7204 63 33 10 chr15 43519402 43520364 -59974610 + L1Md_F2 LINE L1 5587 6570 -12 3 917 1545 193 23 3 chr15 43520400 43520702 -59974272 + Lx2 LINE L1 6690 6997 0 3 917 422 301 70 19 chr15 43520719 43520875 -59974099 + RSINE1 SINE B4 2 165 0 3 917 740 229 97 15 chr15 43521546 43521741 -59973233 + B3 SINE B2 1 211 -5 3 917 431 324 116 0 chr15 43521775 43521948 -59973026 + B3 SINE B2 24 216 0 3 917 1360 224 56 54 chr15 43522243 43522616 -59972358 - ORR1D1 LTR MaLR 0 374 1 4 917 1304 64 16 0 chr15 43522642 43522830 -59972144 - L1_Mus3 LINE L1 -5 6633 6443 4 917 1264 99 22 0 chr15 43523371 43523553 -59971421 - B2_Mm2 SINE B2 -9 186 1 4 917 271 284 133 64 chr15 43525373 43525546 -59969428 + L2 LINE L2 2761 2945 -474 4 917 2515 135 61 5 chr15 43525734 43526144 -59968830 + RLTR10C LTR ERVK 1 433 -3 4 917 1171 207 119 0 chr15 43526226 43526453 -59968521 - Lx5 LINE L1 -155 6895 6642 4 917 407 244 122 0 chr15 43526451 43526566 -59968408 + Lx4B LINE L1 6923 7051 -7 4 917 25 0 0 0 chr15 43526662 43526687 -59968287 + AT_rich Low_complexity Low_complexity 1 25 0 4 917 1167 57 0 0 chr15 43526687 43526828 -59968146 - B1_Mm SINE Alu -6 141 1 4 917 257 281 164 6 chr15 43527070 43527235 -59967739 + LTR79 LTR ERVL 82 272 -255 4 917 1977 140 3 7 chr15 43527610 43527912 -59967062 - ORR1A2 LTR MaLR 0 327 27 5 917 1857 201 31 40 chr15 43528067 43528488 -59966486 - Lx5 LINE L1 0 7050 6634 5 917 641 233 47 0 chr15 43528826 43528955 -59966019 - B1_Mm SINE Alu -12 135 1 5 917 454 303 27 14 chr15 43528955 43528973 -59966001 - ID_B1 SINE B4 -12 212 64 5 917 1851 232 67 79 chr15 43531308 43532006 -59962968 + RMER6C LTR ERVK 1 690 0 5 917 288 311 45 36 chr15 43532085 43532195 -59962779 - PB1D10 SINE Alu -1 116 6 5 917 2023 186 79 44 chr15 43532554 43533050 -59961924 + RLTR31A_Mm LTR ERVK 72 584 0 5 917 339 358 54 7 chr15 43533334 43533483 -59961491 + LTR16A LTR ERVL 205 360 -91 5 917 1359 28 21 21 chr15 43535285 43535471 -59959503 - L1Md_F3 LINE L1 0 6584 6399 5 917 479 211 17 11 chr15 43536083 43536260 -59958714 + (TA)n Simple_repeat Simple_repeat 2 179 0 5 917 409 241 64 57 chr15 43536891 43537032 -59957942 + B4A SINE B4 53 194 -98 6 917 963 63 0 0 chr15 43536937 43537063 -59957911 + B1_Mus1 SINE Alu 10 135 -13 6 917 387 60 0 0 chr15 43537063 43537113 -59957861 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 6 917 1871 126 21 70 chr15 43537428 43537813 -59957161 - RLTR9A LTR ERVK 0 368 3 6 917 300 53 0 0 chr15 43538301 43538339 -59956635 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 6 917 306 0 0 0 chr15 43538781 43538815 -59956159 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 917 448 164 36 9 chr15 43539915 43540026 -59954948 - Lx9 LINE L1 -1 7643 7530 6 917 414 0 0 0 chr15 43540039 43540085 -59954889 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 917 225 160 80 0 chr15 43540085 43540135 -59954839 - Lx9 LINE L1 -168 7476 7423 6 917 245 377 94 20 chr15 43541050 43541199 -59953775 - MamGypLTR1a LTR Gypsy -284 500 341 6 917 238 284 116 90 chr15 43541849 43542004 -59952970 + RSINE1 SINE B4 4 162 -3 6 917 387 181 0 0 chr15 43542198 43542314 -59952660 + A-rich Low_complexity Low_complexity 1 116 0 7 917 1209 178 40 35 chr15 43542600 43542873 -59952101 + L1_Mur3 LINE L1 4902 5177 -703 7 917 4047 110 125 10 chr15 43542874 43543564 -59951410 + RMER17A2 LTR ERVK 74 842 -64 7 917 1778 212 11 3 chr15 43543604 43543968 -59951006 + L1_Mur3 LINE L1 5428 5794 -86 7 917 5777 126 23 1 chr15 43543964 43545132 -59949842 - Lx LINE L1 -591 6063 4866 7 917 3852 132 3 7 chr15 43545132 43545728 -59949246 + Lx LINE L1 6056 6649 -5 7 917 1061 86 7 0 chr15 43545730 43545869 -59949105 + B1_Mus1 SINE Alu 3 142 -6 7 917 264 77 0 0 chr15 43545871 43545910 -59949064 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 7 917 5578 250 34 55 chr15 43545914 43547413 -59947561 + Lx6 LINE L1 5790 7256 -204 7 917 428 269 0 81 chr15 43547642 43547816 -59947158 + L1M4 LINE L1 3689 3848 -2298 7 917 480 232 27 47 chr15 43547817 43547966 -59947008 + B1F SINE Alu 1 146 -3 7 917 252 122 0 0 chr15 43548004 43548045 -59946929 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 7 917 27 0 0 0 chr15 43550239 43550266 -59944708 + AT_rich Low_complexity Low_complexity 1 27 0 8 917 261 0 0 0 chr15 43551454 43551483 -59943491 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 917 225 0 0 0 chr15 43552007 43552032 -59942942 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 8 917 1098 45 0 0 chr15 43552032 43552165 -59942809 - B1_Mm SINE Alu -13 134 2 8 917 294 143 0 0 chr15 43552811 43552860 -59942114 + (A)n Simple_repeat Simple_repeat 1 49 0 8 917 815 283 55 73 chr15 43553255 43553583 -59941391 - MTE2a LTR MaLR -57 322 1 8 917 406 282 147 16 chr15 43553583 43553774 -59941200 + B3A SINE B2 1 216 0 8 917 2821 135 40 30 chr15 43553853 43554351 -59940623 - Lx3B LINE L1 -5 6968 6466 8 917 7183 15 6 4 chr15 43554351 43555171 -59939803 + RLTR13B2 LTR ERVK 1 822 0 8 917 311 275 72 36 chr15 43555178 43555344 -59939630 - L1M4c LINE L1 -3139 3240 3069 8 917 13812 88 17 5 chr15 43555510 43558181 -59936793 - L1VL2 LINE L1 -627 2988 284 9 917 581 295 142 26 chr15 43558181 43558675 -59936299 - L1_Rod LINE L1 -3097 2750 2180 9 917 267 130 0 0 chr15 43558675 43558729 -59936245 + (GTTTG)n Simple_repeat Simple_repeat 2 55 0 9 917 204 104 19 77 chr15 43558869 43558921 -59936053 + T-rich Low_complexity Low_complexity 5 53 0 9 917 204 125 0 0 chr15 43558932 43558964 -59936010 + (T)n Simple_repeat Simple_repeat 1 32 0 9 917 434 327 50 31 chr15 43559072 43559589 -59935385 - L1M4c LINE L1 -3908 2208 1524 8 917 4733 145 100 20 chr15 43560854 43560869 -59934105 - Lx3C LINE L1 0 6976 6964 9 917 324 70 0 0 chr15 43560869 43560912 -59934062 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 9 917 4733 145 100 20 chr15 43560912 43561774 -59933200 - Lx3C LINE L1 -13 6963 6029 9 917 298 335 41 64 chr15 43562336 43562556 -59932418 + L2a LINE L2 3212 3426 0 9 917 24 67 0 0 chr15 43563115 43563160 -59931814 + AT_rich Low_complexity Low_complexity 1 45 0 9 917 805 239 184 12 chr15 43563757 43563901 -59931073 + ORR1D1 LTR MaLR 1 176 -198 9 917 495 0 0 0 chr15 43563901 43563956 -59931018 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 917 805 239 184 12 chr15 43563956 43564061 -59930913 + ORR1D1 LTR MaLR 177 293 -81 9 917 1076 338 40 27 chr15 43564220 43564667 -59930307 - Lx8 LINE L1 -2 7471 7019 1 917 764 239 118 14 chr15 43564706 43564927 -59930047 + Lx2B LINE L1 6754 6997 -3 1 917 2197 84 132 11 chr15 43566531 43566879 -59928095 + RLTR10 LTR ERVK 1 390 0 1 917 539 268 33 44 chr15 43567285 43567465 -59927509 - B3A SINE B2 -16 182 5 1 917 213 196 0 0 chr15 43569114 43569160 -59925814 + (CACG)n Simple_repeat Simple_repeat 2 47 0 1 917 431 377 54 5 chr15 43570036 43570208 -59924766 + B3A SINE B2 3 183 -15 1 917 417 20 0 0 chr15 43570208 43570258 -59924716 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 917 431 377 54 5 chr15 43570258 43570269 -59924705 + B3A SINE B2 184 194 -4 1 917 7334 75 13 3 chr15 43570724 43571979 -59922995 - L1_Mus1 LINE L1 0 6654 5309 1 917 22033 56 3 1 chr15 43572045 43575589 -59919385 - L1Md_F2 LINE L1 -11 6571 3020 1 917 3331 111 4 0 chr15 43575589 43576084 -59918890 - L1_Mm LINE L1 -444 5439 4943 1 917 21 0 0 0 chr15 43576104 43576125 -59918849 + AT_rich Low_complexity Low_complexity 1 21 0 1 917 24952 74 1 7 chr15 43576363 43577013 -59917961 + L1_Mm LINE L1 1910 2559 -3324 1 917 1819 40 0 0 chr15 43577013 43577235 -59917739 + L1Md_T LINE L1 6361 6582 0 1 917 24952 74 1 7 chr15 43577235 43579019 -59915955 + L1_Mm LINE L1 2560 4338 -1545 1 917 8087 40 0 1 chr15 43579019 43579993 -59914981 + L1Md_T LINE L1 5610 6582 0 1 917 24952 74 1 7 chr15 43579993 43580955 -59914019 + L1_Mm LINE L1 4339 5289 -594 1 917 235 306 105 39 chr15 43581738 43581973 -59913001 - MIRb SINE MIR 0 268 15 1 917 207 0 0 0 chr15 43582141 43582164 -59912810 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 917 595 230 76 5 chr15 43583743 43583940 -59911034 + L1MB5 LINE L1 5723 5933 -241 1 917 666 347 61 59 chr15 43584014 43584440 -59910534 - MLT2F LTR ERVL -56 607 181 1 917 201 333 116 12 chr15 43584742 43584906 -59910068 - MIRb SINE MIR -81 187 7 1 917 739 254 5 55 chr15 43586520 43586720 -59908254 + B3A SINE B2 4 193 -5 1 917 912 134 6 16 chr15 43587050 43587232 -59907742 + CT-rich Low_complexity Low_complexity 1 180 0 1 917 640 200 247 0 chr15 43587299 43587469 -59907505 - B3 SINE B2 -4 212 1 1 917 405 0 0 0 chr15 43587496 43587541 -59907433 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 917 536 333 8 8 chr15 43587558 43587688 -59907286 - RSINE1 SINE B4 -35 130 1 1 917 1862 255 111 43 chr15 43587690 43588719 -59906255 + L1MC LINE L1 3830 4928 -1218 1 917 207 248 23 0 chr15 43588737 43588838 -59906136 + GA-rich Low_complexity Low_complexity 2 105 0 1 917 378 0 0 0 chr15 43588838 43588880 -59906094 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 1 917 207 248 23 0 chr15 43588880 43588907 -59906067 + polypurine Low_complexity Low_complexity 106 132 0 1 917 184 344 47 0 chr15 43589757 43589821 -59905153 - L2a LINE L2 -12 3414 3348 1 917 417 20 0 0 chr15 43590257 43590307 -59904667 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 917 638 87 7 74 chr15 43590307 43590456 -59904518 + GA-rich Low_complexity Low_complexity 2 140 0 1 917 464 0 18 0 chr15 43590490 43590546 -59904428 + (GA)n Simple_repeat Simple_repeat 2 58 0 1 917 198 309 0 18 chr15 43590634 43590690 -59904284 - L2c LINE L2 -6 3381 3327 1 917 8084 49 6 0 chr15 43590977 43592214 -59902760 - L1Md_F3 LINE L1 -14 6570 5326 1 917 13846 51 3 0 chr15 43592213 43593951 -59901023 + L1Md_F3 LINE L1 3843 5585 -298 1 917 8059 36 19 0 chr15 43593952 43594929 -59900045 + L1Md_F3 LINE L1 5587 6582 -2 1 917 617 72 0 23 chr15 43594929 43595015 -59899959 + L1_Mm LINE L1 5294 5377 -506 1 917 21 36 0 0 chr15 43595464 43595492 -59899482 + AT_rich Low_complexity Low_complexity 1 28 0 1 917 479 342 21 52 chr15 43595503 43595697 -59899277 + B4A SINE B4 10 197 -95 1 917 1421 58 11 5 chr15 43595705 43595896 -59899078 + MTB LTR MaLR 209 400 0 1 917 220 380 51 34 chr15 43596674 43596791 -59898183 + L2a LINE L2 3007 3125 -301 1 917 1512 161 72 82 chr15 43597353 43597684 -59897290 - ORR1A4 LTR MaLR 0 329 2 1 917 703 305 56 0 chr15 43597684 43597881 -59897093 - ID_B1 SINE B4 -15 209 2 1 917 1209 151 17 52 chr15 43597892 43598123 -59896851 + URR1B DNA MER1_type 3 225 0 1 917 24 67 0 0 chr15 43598551 43598596 -59896378 + AT_rich Low_complexity Low_complexity 1 45 0 1 917 317 296 58 39 chr15 43598616 43598763 -59896211 - PB1D10 SINE Alu 0 147 5 1 917 770 249 101 85 chr15 43598792 43599157 -59895817 - L1MA7 LINE L1 -53 6238 5868 1 917 240 190 12 23 chr15 43600466 43600552 -59894422 + CT-rich Low_complexity Low_complexity 3 87 0 1 917 664 193 164 28 chr15 43600556 43600769 -59894205 - RMER4B LTR ERVK -329 256 15 1 917 534 291 163 16 chr15 43602035 43602286 -59892688 + B4A SINE B4 4 291 -1 1 917 203 184 0 0 chr15 43602287 43602325 -59892649 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 1 917 234 0 0 0 chr15 43602326 43602352 -59892622 + (CAGA)n Simple_repeat Simple_repeat 1 26 0 1 917 661 251 139 30 chr15 43602415 43602645 -59892329 + Lx8 LINE L1 6878 7132 -341 1 917 324 256 89 15 chr15 43602666 43602801 -59892173 + Lx8 LINE L1 7301 7445 -28 1 917 1441 154 87 87 chr15 43603538 43603873 -59891101 - ORR1B1 LTR MaLR -13 381 47 1 917 369 136 22 22 chr15 43604029 43604119 -59890855 + (TGG)n Simple_repeat Simple_repeat 1 90 0 1 917 227 257 114 0 chr15 43604613 43604683 -59890291 - Charlie10 DNA MER1_type -1638 1184 1107 1 917 821 249 22 0 chr15 43605965 43606150 -59888824 - ORR1C2 LTR MaLR -15 369 108 1 917 846 113 0 0 chr15 43606150 43606301 -59888673 + (GA)n Simple_repeat Simple_repeat 2 152 0 1 917 589 187 16 0 chr15 43606301 43606406 -59888568 - ORR1C2 LTR MaLR -267 107 2 1 917 245 208 0 0 chr15 43606798 43606866 -59888108 + (TA)n Simple_repeat Simple_repeat 1 68 0 1 917 186 347 42 0 chr15 43606875 43606947 -59888027 + L2 LINE L2 2817 2891 -528 1 917 1198 36 36 6 chr15 43607569 43607735 -59887239 + L1Md_F3 LINE L1 6413 6583 -1 1 917 4691 267 60 36 chr15 43607752 43608064 -59886910 + L1_Mur3 LINE L1 3965 4284 -1596 1 917 306 106 0 0 chr15 43608064 43608111 -59886863 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 917 4691 267 60 36 chr15 43608111 43608417 -59886557 + L1_Mur3 LINE L1 4285 4608 -1272 1 917 1175 54 0 20 chr15 43608417 43608555 -59886419 + B1_Mus2 SINE Alu 1 138 -9 1 917 197 33 33 0 chr15 43608555 43608585 -59886389 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 917 1175 54 0 20 chr15 43608585 43608596 -59886378 + B1_Mus2 SINE Alu 139 147 0 1 917 4691 267 60 36 chr15 43608596 43609690 -59885284 + L1_Mur3 LINE L1 4609 5719 -161 1 917 767 275 114 36 chr15 43609684 43609990 -59884984 + Lx8 LINE L1 6830 7159 -314 1 917 364 262 228 34 chr15 43610104 43610341 -59884633 - RLTR24 LTR ERV1 0 529 247 1 917 1098 286 32 12 chr15 43610901 43611241 -59883733 + Lx8 LINE L1 7127 7473 0 1 917 662 347 124 40 chr15 43611241 43612013 -59882961 - L2 LINE L2 -876 2543 1707 1 917 605 324 112 75 chr15 43612619 43613079 -59881895 - MLT1E2 LTR MaLR -124 503 69 1 917 216 0 0 0 chr15 43613084 43613108 -59881866 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 1 917 593 280 39 81 chr15 43614368 43614652 -59880322 - B4A SINE B4 -18 274 3 1 917 186 43 0 0 chr15 43614789 43614812 -59880162 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1 917 289 346 0 0 chr15 43614819 43614897 -59880077 - PB1D10 SINE Alu -15 102 25 1 917 372 43 0 0 chr15 43615012 43615058 -59879916 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 917 208 333 0 44 chr15 43616608 43616790 -59878184 + (TATATG)n Simple_repeat Simple_repeat 4 177 0 1 917 288 326 0 22 chr15 43616712 43616894 -59878080 + (TATG)n Simple_repeat Simple_repeat 2 179 0 1 917 242 290 64 76 chr15 43616934 43617091 -59877883 + RLTR22_Mur LTR ERVK 1307 1461 -387 1 917 327 326 0 17 chr15 43617104 43617279 -59877695 + (TATATG)n Simple_repeat Simple_repeat 1 172 0 1 917 321 281 17 29 chr15 43617376 43617548 -59877426 + (TATG)n Simple_repeat Simple_repeat 4 173 0 1 917 208 337 17 23 chr15 43617610 43617783 -59877191 + (TATATG)n Simple_repeat Simple_repeat 2 173 0 1 917 21 0 0 0 chr15 43618087 43618108 -59876866 + AT_rich Low_complexity Low_complexity 1 21 0 1 917 7760 73 16 5 chr15 43618113 43619125 -59875849 + RLTR13D5 LTR ERVK 1 1023 0 1 917 4387 114 54 3 chr15 43619248 43619910 -59875064 + Lx3C LINE L1 6279 6974 -2 1 917 288 0 0 0 chr15 43619927 43619959 -59875015 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1 917 5962 200 64 18 chr15 43619977 43621789 -59873185 + Lx5 LINE L1 5151 7044 -6 1 917 1181 282 14 51 chr15 43622377 43622732 -59872242 + MTE2a LTR MaLR 38 379 0 1 917 519 112 0 0 chr15 43623073 43623153 -59871821 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 917 4913 57 0 0 chr15 43623557 43624174 -59870800 + L1Md_F2 LINE L1 4970 5586 -297 1 917 7974 48 5 4 chr15 43624174 43625168 -59869806 + L1Md_F2 LINE L1 5587 6581 -1 1 917 493 291 34 110 chr15 43625170 43625406 -59869568 + RLTR26 LTR ERVK 269 486 -156 1 917 525 32 0 0 chr15 43625547 43625610 -59869364 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 917 21 57 0 0 chr15 43625615 43625650 -59869324 + AT_rich Low_complexity Low_complexity 1 35 0 1 917 254 264 161 117 chr15 43625661 43625798 -59869176 - RSINE1 SINE B4 -18 147 5 1 917 311 281 47 20 chr15 43625976 43626125 -59868849 - L1M4 LINE L1 -385 5799 5647 1 917 1279 264 26 45 chr15 43626126 43626507 -59868467 - ORR1D1 LTR MaLR 0 374 1 1 917 1132 202 5 14 chr15 43626845 43627061 -59867913 + Lx5 LINE L1 6213 6426 -624 1 917 903 314 75 9 chr15 43627059 43627381 -59867593 + Lx5 LINE L1 6691 7033 -17 1 917 477 296 118 37 chr15 43627436 43627706 -59867268 + MTEa LTR MaLR 3 294 -85 1 917 21 0 0 0 chr15 43629075 43629096 -59865878 + AT_rich Low_complexity Low_complexity 1 21 0 1 917 242 291 139 46 chr15 43629344 43629452 -59865522 - ORR1E LTR MaLR -220 139 22 1 917 284 382 18 54 chr15 43630456 43630539 -59864435 - MLT1J LTR MaLR -234 278 202 1 917 192 40 0 0 chr15 43630539 43630564 -59864410 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 2 917 284 382 18 54 chr15 43630564 43630646 -59864328 - MLT1J LTR MaLR -311 201 119 1 917 1945 142 9 50 chr15 43630994 43631335 -59863639 - ORR1A4 LTR MaLR 0 329 3 2 917 8499 160 65 102 chr15 43631336 43633367 -59861607 - ORR1A4-int LTR MaLR -8 1955 1 2 917 232 186 194 28 chr15 43633368 43633440 -59861534 - ORR1A4 LTR MaLR -13 314 231 2 917 432 0 0 0 chr15 43633545 43633593 -59861381 + (TTCC)n Simple_repeat Simple_repeat 1 48 0 2 917 708 182 0 0 chr15 43633593 43633730 -59861244 + CT-rich Low_complexity Low_complexity 2 138 0 2 917 925 66 62 49 chr15 43633757 43633796 -59861178 - B1_Mus1 SINE Alu 0 148 61 2 917 226 226 21 86 chr15 43633798 43633841 -59861133 - ORR1A4-int LTR MaLR -762 747 707 2 917 4389 48 6 0 chr15 43633841 43634405 -59860569 + L1Md_F2 LINE L1 6021 6582 0 2 917 925 66 62 49 chr15 43634405 43634463 -59860511 - B1_Mus1 SINE Alu -88 60 4 2 917 392 184 25 149 chr15 43634463 43634479 -59860495 - MT2B LTR ERVL -385 216 153 2 917 226 226 21 86 chr15 43634479 43634500 -59860474 - ORR1A4-int LTR MaLR -803 706 618 2 917 529 280 73 11 chr15 43636487 43636664 -59858310 - MER58B DNA MER1_type -6 335 148 2 917 498 347 125 63 chr15 43637077 43637502 -59857472 + MER21B LTR ERV1 44 494 -369 2 917 496 301 27 0 chr15 43637579 43637725 -59857249 + MER21B LTR ERV1 590 739 -124 2 917 213 268 47 85 chr15 43638836 43638942 -59856032 - L3 LINE CR1 -2300 2189 2088 2 917 261 254 30 0 chr15 43639340 43639407 -59855567 + MIRc SINE MIR 13 81 -187 2 917 461 316 46 38 chr15 43639411 43639648 -59855326 + Lx9 LINE L1 7173 7411 -233 2 917 27 29 0 0 chr15 43639789 43639823 -59855151 + AT_rich Low_complexity Low_complexity 1 34 0 2 917 460 319 137 66 chr15 43640987 43641785 -59853189 - HAL1b LINE L1 -648 1361 508 2 917 2740 194 17 10 chr15 43641891 43642411 -59852563 - RLTR11A2 LTR ERVK -3 524 1 2 917 1074 182 36 50 chr15 43642430 43642707 -59852267 - MYSERV-int LTR ERVK -17 6533 6261 2 917 17808 95 10 19 chr15 43642713 43644694 -59850280 + L1_Mus1 LINE L1 3286 5228 -655 2 917 225 0 0 0 chr15 43644694 43644719 -59850255 + (TC)n Simple_repeat Simple_repeat 2 26 0 2 917 198 0 0 0 chr15 43644719 43644740 -59850234 + (TA)n Simple_repeat Simple_repeat 1 22 0 2 917 243 0 0 0 chr15 43644740 43644766 -59850208 + (GA)n Simple_repeat Simple_repeat 2 28 0 2 917 17808 92 3 7 chr15 43644766 43646087 -59848887 + L1_Mus1 LINE L1 5229 6566 -1 2 917 391 158 0 137 chr15 43646175 43646246 -59848728 - MYSERV16_I-int LTR ERVK -1164 1162 1094 2 917 297 0 0 0 chr15 43646246 43646279 -59848695 + (TTTTG)n Simple_repeat Simple_repeat 5 37 0 2 917 391 158 0 137 chr15 43646279 43646324 -59848650 - MYSERV16_I-int LTR ERVK -1233 1093 1062 2 917 247 333 103 28 chr15 43646329 43646474 -59848500 - RMER4A LTR ERVK -13 453 298 2 114 1669 263 88 56 chr15 43646485 43647274 -59847700 - MYSERV16_I-int LTR ERVK -1425 901 88 2 918 1433 148 33 77 chr15 43647275 43647612 -59847362 - RLTRETN_Mm LTR ERVK 0 322 1 2 918 33200 53 4 11 chr15 43647612 43651891 -59843083 - MMETn-int LTR ERVK 0 4844 593 2 918 3704 44 2 7 chr15 43651888 43652343 -59842631 - MMETn-int LTR ERVK -2861 453 1 2 918 1406 139 39 83 chr15 43652343 43652680 -59842294 - RLTRETN_Mm LTR ERVK 0 322 1 2 918 461 238 68 19 chr15 43652680 43652857 -59842117 - MYSERV-int LTR ERVK -4358 4601 4441 2 918 501 237 24 56 chr15 43652951 43653076 -59841898 - B1_Mur4 SINE Alu -6 144 24 2 918 243 0 0 0 chr15 43653082 43653109 -59841865 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 2 918 2208 191 68 6 chr15 43653883 43654379 -59840595 - RLTR11A2 LTR ERVK 0 527 1 2 918 3110 68 2 5 chr15 43654407 43654804 -59840170 - MTA_Mm LTR MaLR 0 396 1 2 918 22 0 0 0 chr15 43655040 43655062 -59839912 + AT_rich Low_complexity Low_complexity 1 22 0 2 918 319 334 95 82 chr15 43655387 43655784 -59839190 - MLT2B3 LTR ERVL -2 560 70 2 918 405 110 0 0 chr15 43655797 43655870 -59839104 + (TC)n Simple_repeat Simple_repeat 1 73 0 2 918 4010 164 11 26 chr15 43656199 43656895 -59838079 - RLTR17 LTR ERVK -3 689 4 2 918 248 306 74 42 chr15 43657172 43657387 -59837587 - L1MEf LINE L1 -5167 1033 812 2 918 190 298 22 56 chr15 43658506 43658595 -59836379 + MIRm SINE MIR 63 148 -128 2 918 5710 230 108 99 chr15 43659487 43661204 -59833770 - Lx7 LINE L1 -1226 6470 4535 2 918 500 275 66 35 chr15 43661204 43661430 -59833544 - RLTR15 LTR ERVK -126 233 1 2 918 5710 230 108 99 chr15 43661430 43661859 -59833115 - Lx7 LINE L1 -1226 4534 4049 2 918 6525 121 28 9 chr15 43661859 43662911 -59832063 + Lx2A1 LINE L1 5928 6998 -10 2 918 249 57 0 0 chr15 43662911 43662946 -59832028 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 918 5710 226 138 119 chr15 43662946 43663639 -59831335 - Lx7 LINE L1 -1832 4048 3418 2 918 225 0 0 0 chr15 43663639 43663664 -59831310 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2 918 5710 226 138 119 chr15 43663664 43664889 -59830085 - Lx7 LINE L1 -2463 3417 2116 2 918 4321 174 88 7 chr15 43664902 43665719 -59829255 - RMER19B LTR ERVK -12 890 8 2 918 3775 51 7 68 chr15 43666796 43667341 -59827633 - RLTR1B LTR ERV1 0 512 1 2 918 198 0 0 0 chr15 43667371 43667393 -59827581 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 2 918 1080 73 0 0 chr15 43667980 43668116 -59826858 + B1_Mus1 SINE Alu 2 137 -11 2 918 582 29 37 28 chr15 43668116 43668223 -59826751 + (CAAAC)n Simple_repeat Simple_repeat 2 109 0 2 918 6433 50 11 17 chr15 43668225 43669038 -59825936 + RLTR13C2 LTR ERVK 1 808 0 2 918 1193 104 0 6 chr15 43669057 43669222 -59825752 - B2_Mm2 SINE B2 -27 168 5 2 918 218 81 0 26 chr15 43669307 43669345 -59825629 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 2 918 32 57 0 0 chr15 43669418 43669471 -59825503 + AT_rich Low_complexity Low_complexity 1 53 0 2 918 1148 252 125 56 chr15 43669691 43670162 -59824812 - MT2B LTR ERVL -2 599 1 2 918 1447 263 24 26 chr15 43670416 43670841 -59824133 + L1VL4 LINE L1 197 620 -5682 2 918 10234 88 23 11 chr15 43670843 43672421 -59822553 + MusHAL1 LINE L1 164 1760 -952 2 918 392 176 9 27 chr15 43672421 43672532 -59822442 + L1Md_F2 LINE L1 6474 6582 0 2 918 11325 174 9 42 chr15 43672569 43673601 -59821373 + L1_Mus4 LINE L1 3694 4727 -1150 2 918 306 0 0 0 chr15 43673601 43673635 -59821339 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2 918 11325 174 9 42 chr15 43673635 43674206 -59820768 + L1_Mus4 LINE L1 4728 5293 -584 2 918 550 54 0 0 chr15 43674206 43674271 -59820703 + B1_Mm SINE Alu 74 138 -9 2 918 195 42 0 0 chr15 43674271 43674295 -59820679 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 2 918 11325 126 21 45 chr15 43674303 43674970 -59820004 + L1_Mus4 LINE L1 5294 5971 -665 2 918 1142 51 0 0 chr15 43674970 43675107 -59819867 + B1_Mm SINE Alu 1 137 -10 2 918 6953 88 30 48 chr15 43675107 43675796 -59819178 + L1_Mus4 LINE L1 5972 6631 -5 2 918 309 155 0 0 chr15 43675796 43675854 -59819120 + GA-rich Low_complexity Low_complexity 1 58 0 2 918 244 255 66 38 chr15 43675910 43676016 -59818958 - ORR1A3 LTR MaLR -2 324 216 2 918 475 283 38 26 chr15 43676105 43676346 -59818628 + L1_Mur3 LINE L1 5352 5565 -315 2 918 201 158 0 0 chr15 43676412 43676450 -59818524 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2 918 217 303 20 29 chr15 43677978 43678080 -59816894 + MIR SINE MIR 151 251 -11 2 918 402 21 0 0 chr15 43679117 43679164 -59815810 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 918 205 186 51 0 chr15 43679194 43679253 -59815721 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 2 918 191 300 0 0 chr15 43679682 43679722 -59815252 - L4 LINE RTE -787 1242 1203 2 918 303 96 0 0 chr15 43682804 43682856 -59812118 + (ATTG)n Simple_repeat Simple_repeat 2 53 0 2 918 861 296 150 46 chr15 43683966 43684685 -59810289 + L1MA8 LINE L1 5457 6250 -41 2 918 564 91 0 0 chr15 43685665 43685753 -59809221 + (GA)n Simple_repeat Simple_repeat 1 88 0 2 918 22 0 0 0 chr15 43685938 43685960 -59809014 + AT_rich Low_complexity Low_complexity 1 22 0 2 918 402 298 32 0 chr15 43686055 43686179 -59808795 + MIR SINE MIR 74 201 -61 2 918 1812 181 39 3 chr15 43686730 43687035 -59807939 + RMER1B Other Other 495 810 -256 2 918 753 138 20 52 chr15 43687065 43687218 -59807756 + RMER1B Other Other 919 1066 0 2 918 26 0 0 0 chr15 43687424 43687450 -59807524 + AT_rich Low_complexity Low_complexity 1 26 0 2 918 260 364 109 52 chr15 43687697 43687871 -59807103 + MLT1F1 LTR MaLR 135 318 -230 2 918 365 318 8 37 chr15 43687878 43688012 -59806962 + B4 SINE B4 4 133 -159 2 918 529 288 18 24 chr15 43688169 43688333 -59806641 + MLT1F1 LTR MaLR 407 569 0 2 918 233 298 138 0 chr15 43688631 43688725 -59806249 + MLT1J1 LTR MaLR 173 279 -165 2 918 297 0 0 0 chr15 43688870 43688903 -59806071 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 918 677 402 103 20 chr15 43689084 43689581 -59805393 - MLT1J-int LTR MaLR -86 1301 764 2 918 200 222 0 22 chr15 43690066 43690112 -59804862 + T-rich Low_complexity Low_complexity 3 47 0 2 918 334 103 0 49 chr15 43690113 43690174 -59804800 - B1_Mus2 SINE Alu -1 146 89 2 918 201 94 0 0 chr15 43691426 43691458 -59803516 + (A)n Simple_repeat Simple_repeat 1 32 0 2 918 1106 73 0 0 chr15 43691570 43691707 -59803267 - B1_Mm SINE Alu -10 137 1 2 918 1124 38 51 6 chr15 43694449 43694606 -59800368 + L1_Mus2 LINE L1 6402 6565 -1 2 918 216 0 0 0 chr15 43694777 43694801 -59800173 + (TA)n Simple_repeat Simple_repeat 2 25 0 2 918 221 306 42 0 chr15 43695555 43695627 -59799347 - ID4 SINE ID 0 83 9 2 918 435 265 66 0 chr15 43696219 43696355 -59798619 - B1F1 SINE Alu -2 147 3 2 918 441 54 0 0 chr15 43696655 43696711 -59798263 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 918 387 0 0 0 chr15 43696711 43696753 -59798221 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 918 192 256 106 43 chr15 43699037 43699131 -59795843 + L2 LINE L2 2281 2380 -1039 2 918 372 231 85 101 chr15 43700857 43701045 -59793929 + RMER17C LTR ERVK 171 355 -55 2 918 210 71 0 0 chr15 43701601 43701629 -59793345 + (CGGGG)n Simple_repeat Simple_repeat 1 28 0 2 918 377 330 34 63 chr15 43701903 43702110 -59792864 - MIRb SINE MIR -46 222 22 2 918 189 0 0 0 chr15 43703770 43703791 -59791183 + (T)n Simple_repeat Simple_repeat 1 21 0 2 918 858 171 14 0 chr15 43703791 43703937 -59791037 - B1_Mus1 SINE Alu 0 148 1 2 918 737 254 66 5 chr15 43704266 43704464 -59790510 + B3 SINE B2 1 210 -6 2 918 28 29 0 0 chr15 43705365 43705400 -59789574 + AT_rich Low_complexity Low_complexity 1 35 0 2 918 697 76 0 19 chr15 43705526 43705633 -59789341 + (TTCTC)n Simple_repeat Simple_repeat 4 108 0 2 918 474 101 0 0 chr15 43705653 43705722 -59789252 + (TA)n Simple_repeat Simple_repeat 1 69 0 2 918 259 292 60 34 chr15 43707185 43707302 -59787672 - LTR68 LTR ERV1 -336 404 285 2 918 222 118 0 0 chr15 43707372 43707406 -59787568 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2 918 339 290 83 83 chr15 43707715 43708027 -59786947 + RMER17C LTR ERVK 49 360 -50 2 918 763 306 124 29 chr15 43708058 43708705 -59786269 - L1_Mur3 LINE L1 -559 5321 4614 2 918 692 193 68 7 chr15 43708800 43708946 -59786028 + Lx9 LINE L1 7288 7442 -202 3 918 1588 197 92 109 chr15 43708959 43709416 -59785558 - RMER16 LTR ERVK -84 449 1 3 918 527 95 0 0 chr15 43709416 43709490 -59785484 - RMER16-int LTR ERVK 0 5406 5333 3 918 9282 76 12 16 chr15 43709600 43710875 -59784099 - RMER16-int LTR ERVK -103 5303 4034 3 918 2682 87 17 43 chr15 43710875 43711297 -59783677 + IAPLTR2a LTR ERVK 1 411 0 3 918 11636 38 21 19 chr15 43711307 43712748 -59782226 + IAPEz-int LTR ERVK 35 1477 -5004 3 918 1886 87 8 4 chr15 43712743 43712996 -59781978 + IAPEz-int LTR ERVK 2244 2497 -5183 3 918 999 71 0 0 chr15 43712993 43713119 -59781855 + IAPEz-int LTR ERVK 4785 4910 -2770 3 918 26309 15 2 0 chr15 43713119 43716070 -59778904 + IAPEz-int LTR ERVK 3525 6481 0 3 918 2669 89 17 43 chr15 43716070 43716492 -59778482 + IAPLTR2a LTR ERVK 1 411 0 3 918 18384 81 25 18 chr15 43716492 43717000 -59777974 - RMER16-int LTR ERVK -1367 4039 3521 3 918 1662 137 24 63 chr15 43717000 43717335 -59777639 + RLTRETN_Mm LTR ERVK 1 322 0 3 918 18384 81 25 18 chr15 43717335 43719454 -59775520 - RMER16-int LTR ERVK -1886 3520 1393 3 918 462 103 0 0 chr15 43719457 43719535 -59775439 - L1Md_F2 LINE L1 0 6582 6505 3 918 400 166 0 22 chr15 43719582 43719674 -59775300 - RLTR19-int LTR ERVK -4882 1255 1185 3 918 8577 106 66 7 chr15 43719735 43721079 -59773895 - RMER16-int LTR ERVK -3982 1424 1 3 918 633 190 32 32 chr15 43721079 43721204 -59773770 - RMER16 LTR ERVK 0 533 409 3 918 2624 231 109 50 chr15 43721762 43722570 -59772404 + L1_Mur3 LINE L1 18 873 -6839 3 918 338 294 66 61 chr15 43722574 43722755 -59772219 - RLTR23 LTR ERV1 -2 428 247 3 918 22 0 0 0 chr15 43723819 43723841 -59771133 + AT_rich Low_complexity Low_complexity 1 22 0 3 918 193 111 56 0 chr15 43723851 43723905 -59771069 + (TTTAA)n Simple_repeat Simple_repeat 5 61 0 3 918 204 56 56 0 chr15 43723909 43723945 -59771029 + (TTA)n Simple_repeat Simple_repeat 2 39 0 3 918 375 303 28 0 chr15 43725602 43725711 -59769263 + RSINE1 SINE B4 45 156 -9 3 918 484 260 213 37 chr15 43725859 43726267 -59768707 - L1MA6 LINE L1 -80 6220 5741 3 918 369 358 78 58 chr15 43726673 43726916 -59768058 - MLT1H LTR MaLR -237 312 65 3 918 1560 171 4 7 chr15 43726931 43727208 -59767766 - Lx LINE L1 0 6654 6379 3 918 1199 14 0 0 chr15 43727969 43728107 -59766867 + B1_Mm SINE Alu 2 139 -8 3 918 197 33 33 0 chr15 43728107 43728137 -59766837 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 918 3599 176 128 45 chr15 43728182 43728700 -59766274 - RMER13B LTR ERVK 0 908 340 3 918 848 221 159 31 chr15 43728700 43729059 -59765915 - RLTR9E LTR ERVK 0 409 5 3 918 3599 176 128 45 chr15 43729059 43729379 -59765595 - RMER13B LTR ERVK -569 339 1 3 918 180 0 0 0 chr15 43730343 43730363 -59764611 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 918 273 302 65 40 chr15 43730441 43730565 -59764409 - L2b LINE L2 -1 3374 3248 3 918 308 277 96 0 chr15 43731848 43731931 -59763043 + PB1D10 SINE Alu 19 109 -8 3 918 243 0 0 0 chr15 43731934 43731961 -59763013 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 918 965 322 50 2 chr15 43732022 43732458 -59762516 + L1MB1 LINE L1 5659 6115 -53 3 918 360 0 0 0 chr15 43732548 43732588 -59762386 + (TTA)n Simple_repeat Simple_repeat 3 42 0 3 918 24 0 0 0 chr15 43732757 43732781 -59762193 + AT_rich Low_complexity Low_complexity 1 24 0 3 918 2412 175 7 2 chr15 43732956 43733375 -59761599 + MTC LTR MaLR 1 421 0 3 918 18039 79 25 12 chr15 43733613 43736267 -59758707 - MusHAL1 LINE L1 -2 2710 23 3 918 17361 171 14 9 chr15 43736801 43738997 -59755977 + Lx2 LINE L1 2513 4737 -1149 3 918 463 0 48 0 chr15 43738997 43739059 -59755915 + (CAAAA)n Simple_repeat Simple_repeat 2 66 0 3 918 17361 171 14 9 chr15 43739059 43739262 -59755712 + Lx2 LINE L1 4738 4936 -950 3 918 270 0 0 0 chr15 43739262 43739292 -59755682 + (TTA)n Simple_repeat Simple_repeat 1 30 0 3 918 1351 63 6 0 chr15 43739292 43739467 -59755507 - L1_Mus1 LINE L1 -10 6557 6382 3 918 17361 140 17 9 chr15 43739467 43741524 -59753450 + Lx2 LINE L1 4937 6997 0 3 918 335 289 151 78 chr15 43742456 43742801 -59752173 + MER57C2 LTR ERV1 65 434 0 3 918 189 0 0 0 chr15 43742940 43742961 -59752013 + (T)n Simple_repeat Simple_repeat 1 21 0 3 918 234 91 0 0 chr15 43743289 43743322 -59751652 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 918 265 197 0 40 chr15 43743576 43743650 -59751324 + (TA)n Simple_repeat Simple_repeat 2 72 0 3 918 275 185 22 120 chr15 43743986 43744078 -59750896 + ORR1D1 LTR MaLR 1 83 -291 3 918 3014 26 0 0 chr15 43744083 43744429 -59750545 - ORR1A0 LTR MaLR 0 346 1 3 918 10723 62 6 1 chr15 43744429 43745873 -59749101 - ORR1A0-int LTR MaLR 0 1792 342 3 918 216 371 42 28 chr15 43745872 43746016 -59748958 - B1F1 SINE Alu -1 148 3 3 918 6143 127 48 27 chr15 43746678 43747965 -59747009 - Lx LINE L1 -25 6629 5311 3 918 1809 161 9 3 chr15 43747967 43748285 -59746689 + L1_Mm LINE L1 4637 4956 -927 3 918 232 341 15 30 chr15 43748998 43749101 -59745873 - MIRb SINE MIR -137 131 19 3 918 572 163 138 0 chr15 43752842 43752965 -59742009 + RLTR47_MM LTR ERV1 355 494 -38 3 918 6777 145 3 3 chr15 43752986 43754323 -59740651 - Lx LINE L1 -7 6647 5311 3 918 3160 164 9 114 chr15 43754325 43755082 -59739892 + L1_Mur2 LINE L1 4631 5308 -569 3 918 3188 119 72 0 chr15 43755091 43755578 -59739396 + MT2B LTR ERVL 2 523 -78 3 918 189 107 0 0 chr15 43756368 43756396 -59738578 + (A)n Simple_repeat Simple_repeat 1 28 0 3 918 594 290 132 55 chr15 43756660 43756985 -59737989 + MLT1A0 LTR MaLR 13 362 -3 3 918 878 278 47 94 chr15 43757519 43758053 -59736921 + MT2B LTR ERVL 1 601 0 3 918 5579 193 55 14 chr15 43758056 43759239 -59735735 + MERVL_2A-int LTR ERVL 1 1231 -4530 3 918 962 297 20 58 chr15 43759245 43759592 -59735382 + RLTR18 LTR ERVK 5 338 -278 3 918 567 318 29 31 chr15 43759616 43759872 -59735102 + RLTR18 LTR ERVK 217 572 -44 3 918 864 259 89 0 chr15 43759992 43760239 -59734735 + RMER1C Other Other 1074 1342 0 3 918 351 0 0 0 chr15 43760842 43760881 -59734093 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 918 264 122 0 0 chr15 43760881 43760921 -59734053 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 918 411 224 32 0 chr15 43760999 43761124 -59733850 - Lx9 LINE L1 -4 7640 7512 3 918 647 239 39 0 chr15 43761124 43761279 -59733695 + Lx9 LINE L1 7067 7227 -417 3 918 813 320 36 0 chr15 43761279 43761504 -59733470 - B4 SINE B4 -59 233 1 3 918 306 0 0 0 chr15 43762267 43762301 -59732673 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 918 1604 229 109 50 chr15 43762624 43762693 -59732281 - RLTR11A LTR ERVK -8 520 459 3 918 261 57 0 0 chr15 43762693 43762728 -59732246 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 918 1604 229 109 50 chr15 43762728 43763137 -59731837 - RLTR11A LTR ERVK -70 458 16 3 918 229 311 33 11 chr15 43763542 43763633 -59731341 - MIR SINE MIR -70 192 100 3 918 207 0 0 0 chr15 43765616 43765639 -59729335 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 918 288 286 47 19 chr15 43765793 43765900 -59729074 - MER57-int LTR ERV1 -229 7308 7199 3 918 501 345 7 0 chr15 43766420 43766562 -59728412 + RSINE1 SINE B4 1 143 -22 3 918 714 101 0 0 chr15 43768865 43768974 -59726000 + (GGGA)n Simple_repeat Simple_repeat 4 112 0 3 918 362 305 66 9 chr15 43769107 43769213 -59725761 - PB1D10 SINE Alu -5 112 1 3 918 3410 28 2 0 chr15 43769724 43770119 -59724855 - MTA_Mm LTR MaLR 0 396 1 3 918 2473 70 44 3 chr15 43770246 43770588 -59724386 + L1_Mus1 LINE L1 6212 6567 0 3 918 22 0 0 0 chr15 43770592 43770614 -59724360 + AT_rich Low_complexity Low_complexity 1 22 0 3 918 4716 179 37 10 chr15 43770775 43771643 -59723331 + RMER13B LTR ERVK 5 895 -13 3 918 468 0 0 0 chr15 43774659 43774711 -59720263 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 918 1615 127 37 37 chr15 43774712 43775007 -59719967 - Lx2 LINE L1 -12 6985 6691 3 918 441 0 0 0 chr15 43776574 43776623 -59718351 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 3 918 22 35 0 0 chr15 43776850 43776879 -59718095 + AT_rich Low_complexity Low_complexity 1 29 0 3 114 7097 117 39 17 chr15 43777243 43778416 -59716558 - Lx3A LINE L1 0 6981 5783 3 919 2918 39 6 3 chr15 43778433 43778793 -59716181 - L1Md_F3 LINE L1 -1 6583 6223 3 919 29130 98 42 23 chr15 43778794 43784271 -59710703 - L1_Mur1 LINE L1 -94 5792 208 3 919 211 125 25 0 chr15 43784573 43784613 -59710361 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 3 919 369 0 0 0 chr15 43785199 43785240 -59709734 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 919 2076 241 29 23 chr15 43785763 43786243 -59708731 + RLTR16 LTR ERVK 1 483 -22 3 919 11870 106 28 14 chr15 43786776 43789433 -59705541 + L1Md_F2 LINE L1 212 2903 -2980 3 919 11605 75 4 0 chr15 43789415 43790956 -59704018 + L1Md_F2 LINE L1 4040 5586 -297 3 919 7420 65 19 2 chr15 43790956 43791924 -59703050 + L1Md_F2 LINE L1 5587 6570 -12 3 919 245 314 14 0 chr15 43792520 43792590 -59702384 + MIRb SINE MIR 95 165 -103 3 919 2054 129 3 6 chr15 43794017 43794329 -59700645 + RLTR10E LTR ERVK 1 311 0 3 919 232 319 43 32 chr15 43794616 43794710 -59700264 - MLT2E LTR ERVL -486 142 48 3 919 210 257 114 0 chr15 43794939 43795009 -59699965 - MIRb SINE MIR -14 254 177 3 919 396 0 0 0 chr15 43795298 43795342 -59699632 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 919 293 73 0 52 chr15 43796046 43796104 -59698870 + (CAAAAA)n Simple_repeat Simple_repeat 1 55 0 3 919 387 0 0 0 chr15 43796403 43796446 -59698528 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 919 249 189 19 135 chr15 43796996 43797100 -59697874 - ORR1D-int LTR MaLR -252 1118 1027 3 919 1132 224 41 30 chr15 43797129 43797558 -59697416 + Lx6 LINE L1 892 1261 -5825 3 919 463 189 33 0 chr15 43797563 43797653 -59697321 + Lx6 LINE L1 1366 1458 -4422 3 919 1211 184 117 45 chr15 43797671 43797942 -59697032 + ORR1C1 LTR MaLR 3 279 -80 3 919 432 259 74 34 chr15 43797942 43798118 -59696856 - RLTR41 LTR ERV1 0 446 264 3 919 445 163 0 34 chr15 43798455 43798544 -59696430 + ORR1C1 LTR MaLR 308 393 -1 3 919 17679 204 51 24 chr15 43798544 43800575 -59694399 + Lx6 LINE L1 1481 3469 -2411 3 919 315 0 0 0 chr15 43800575 43800610 -59694364 + (CAA)n Simple_repeat Simple_repeat 2 36 0 3 919 17679 204 51 24 chr15 43800610 43801235 -59693739 + Lx6 LINE L1 3470 4174 -1706 3 919 324 0 0 0 chr15 43801235 43801271 -59693703 + (TTTTA)n Simple_repeat Simple_repeat 4 39 0 3 919 17679 204 51 24 chr15 43801271 43801385 -59693589 + Lx6 LINE L1 4175 4280 -1600 3 919 3256 111 14 2 chr15 43801385 43801874 -59693100 + L1_Mus3 LINE L1 6144 6638 0 3 919 17679 195 43 21 chr15 43801874 43803423 -59691551 + Lx6 LINE L1 4281 5926 -1534 3 919 22 0 0 0 chr15 43803973 43803995 -59690979 + AT_rich Low_complexity Low_complexity 1 22 0 3 919 1011 281 74 36 chr15 43804011 43804438 -59690536 + Lx6 LINE L1 5962 6641 -819 3 919 2113 226 23 98 chr15 43804438 43805099 -59689875 + RMER19C LTR ERVK 1 611 0 3 919 1652 275 70 35 chr15 43805099 43805793 -59689181 + Lx6 LINE L1 6483 7430 -30 3 919 430 219 0 12 chr15 43806986 43807069 -59687905 - Lx LINE L1 -506 6148 6067 3 919 1088 166 29 75 chr15 43807063 43807304 -59687670 + Lx LINE L1 6396 6625 -29 4 919 339 44 0 0 chr15 43807304 43807349 -59687625 + (CATA)n Simple_repeat Simple_repeat 2 46 0 4 919 840 290 72 81 chr15 43807415 43807861 -59687113 - RMER5 LTR ERV1 -71 463 22 4 919 438 20 0 0 chr15 43808018 43808069 -59686905 + (TA)n Simple_repeat Simple_repeat 2 52 0 4 919 369 0 0 0 chr15 43808069 43808109 -59686865 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 919 336 308 55 46 chr15 43808600 43808837 -59686137 + L1ME1 LINE L1 5863 6108 -71 4 919 2599 47 0 0 chr15 43808833 43809151 -59685823 - L1Md_T LINE L1 -407 6175 5858 4 919 4186 110 7 2 chr15 43809151 43809763 -59685211 + L1_Mus3 LINE L1 6019 6633 -5 4 919 2495 257 108 38 chr15 43809932 43810014 -59684960 - RMER1C Other Other -8 1334 1199 4 919 237 65 0 0 chr15 43810014 43810045 -59684929 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 4 919 2495 257 108 38 chr15 43810045 43810682 -59684292 - RMER1C Other Other -144 1198 565 4 919 291 323 81 0 chr15 43810717 43810841 -59684133 - RMER1C Other Other -1179 163 30 4 919 396 0 0 0 chr15 43810889 43810933 -59684041 + (TTG)n Simple_repeat Simple_repeat 2 45 0 4 919 641 267 81 39 chr15 43811216 43811450 -59683524 - RMER1C Other Other -1046 296 53 4 919 1751 166 169 17 chr15 43811903 43812372 -59682602 - RLTR11A LTR ERVK 0 528 6 4 919 587 303 0 38 chr15 43812378 43812451 -59682523 - B3 SINE B2 -62 154 84 4 919 3380 30 2 2 chr15 43812451 43812847 -59682127 + MTA_Mm LTR MaLR 1 396 0 4 919 587 303 0 38 chr15 43812847 43812931 -59682043 - B3 SINE B2 -133 83 3 4 919 2518 87 76 15 chr15 43814248 43814643 -59680331 - BGLII LTR ERVK -2 419 1 4 919 241 294 45 81 chr15 43815597 43815819 -59679155 + L1_Mur3 LINE L1 70 283 -7445 4 919 763 232 59 114 chr15 43815889 43816259 -59678715 + L1_Mur3 LINE L1 859 1225 -6503 4 919 1128 95 0 0 chr15 43816259 43816406 -59678568 + B1_Mus2 SINE Alu 1 147 0 4 919 763 232 59 114 chr15 43816406 43816492 -59678482 + L1_Mur3 LINE L1 1226 1290 -6438 4 919 1806 139 60 171 chr15 43816492 43816580 -59678394 - RLTR23 LTR ERV1 -3 427 344 4 919 378 0 0 0 chr15 43816580 43816622 -59678352 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 919 1806 139 60 171 chr15 43816622 43816893 -59678081 - RLTR23 LTR ERV1 -87 343 102 4 919 645 25 0 0 chr15 43816893 43816972 -59678002 + (TTTTG)n Simple_repeat Simple_repeat 3 81 0 4 919 1806 139 60 171 chr15 43816972 43817080 -59677894 - RLTR23 LTR ERV1 -329 101 12 4 919 333 222 0 0 chr15 43817088 43817160 -59677814 + L1_Mur3 LINE L1 1451 1522 -4355 4 919 2143 166 31 7 chr15 43817152 43817566 -59677408 + L1_Mur3 LINE L1 4378 4801 -1079 4 919 918 262 17 22 chr15 43817563 43817793 -59677181 + Lx6 LINE L1 7214 7442 -18 4 919 1531 53 5 0 chr15 43817835 43818024 -59676950 + B2_Mm1t SINE B2 2 191 -2 4 919 450 79 0 0 chr15 43818084 43818147 -59676827 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 4 919 4257 214 40 4 chr15 43818149 43818967 -59676007 - Lx5 LINE L1 -21 7029 6182 4 919 301 324 49 58 chr15 43819187 43819410 -59675564 - L1MEe LINE L1 -4384 470 250 4 919 299 360 99 44 chr15 43819507 43819780 -59675194 - LTR83 LTR ERVL -486 294 7 4 919 560 210 29 23 chr15 43820108 43820257 -59674717 - ORR1D1 LTR MaLR -211 148 3 4 919 23 0 0 29 chr15 43820332 43820349 -59674625 + AT_rich Low_complexity Low_complexity 1 17 0 4 919 327 186 30 20 chr15 43820349 43820448 -59674526 - Lx9 LINE L1 0 7644 7545 4 919 23 0 0 29 chr15 43820448 43820464 -59674510 + AT_rich Low_complexity Low_complexity 1 16 0 4 919 1556 69 0 22 chr15 43820472 43820694 -59674280 - L1Md_F2 LINE L1 -6 6576 6360 4 919 294 132 0 0 chr15 43820694 43820747 -59674227 + L1Md_F LINE L1 223 275 -6244 4 919 286 170 0 0 chr15 43820764 43820811 -59674163 - Lx9 LINE L1 -526 7118 7072 4 919 301 198 68 31 chr15 43820832 43820850 -59674124 + Lx9 LINE L1 7477 7497 -147 4 919 242 0 61 0 chr15 43820850 43820883 -59674091 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 4 919 301 198 68 31 chr15 43820883 43821026 -59673948 + Lx9 LINE L1 7498 7643 -1 4 919 909 205 286 0 chr15 43821119 43821277 -59673697 + ORR1C2 LTR MaLR 3 199 -185 4 919 444 19 0 0 chr15 43821277 43821330 -59673644 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 4 919 909 205 286 0 chr15 43821330 43821468 -59673506 + ORR1C2 LTR MaLR 200 383 -1 4 919 647 225 89 7 chr15 43821959 43822142 -59672832 + ORR1D2 LTR MaLR 1 199 -179 4 919 215 140 20 0 chr15 43822174 43822224 -59672750 + CT-rich Low_complexity Low_complexity 2 52 0 4 919 351 0 0 0 chr15 43822224 43822263 -59672711 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 919 215 159 0 43 chr15 43822372 43822387 -59672587 + polypurine Low_complexity Low_complexity 2 16 0 4 919 1145 111 0 11 chr15 43822387 43822569 -59672405 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 919 215 159 0 43 chr15 43822569 43822599 -59672375 + polypurine Low_complexity Low_complexity 17 45 0 4 919 185 286 20 0 chr15 43822599 43822648 -59672326 - MIRb SINE MIR -206 62 13 4 919 22 56 0 0 chr15 43822752 43822788 -59672186 + AT_rich Low_complexity Low_complexity 1 36 0 4 919 510 156 8 39 chr15 43823533 43823660 -59671314 + A-rich Low_complexity Low_complexity 3 125 0 4 919 186 355 94 24 chr15 43824266 43824393 -59670581 + L3 LINE CR1 2029 2164 -2325 4 919 639 0 0 0 chr15 43825267 43825338 -59669636 + (GAGAA)n Simple_repeat Simple_repeat 4 74 0 4 919 302 0 26 0 chr15 43825722 43825760 -59669214 + (CAGA)n Simple_repeat Simple_repeat 3 41 0 4 919 270 0 0 0 chr15 43826038 43826068 -59668906 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 919 541 166 0 45 chr15 43826191 43826368 -59668606 + (CA)n Simple_repeat Simple_repeat 2 170 0 4 919 471 271 178 49 chr15 43828337 43828663 -59666311 - RLTR9A LTR ERVK 0 368 1 4 919 278 245 9 97 chr15 43829206 43829319 -59665655 - RMER16-int LTR ERVK -1207 6199 6097 4 919 14010 166 85 58 chr15 43829323 43833562 -59661412 - RMER16-int LTR ERVK -1226 4180 255 4 919 237 65 0 0 chr15 43833687 43833718 -59661256 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 919 448 229 47 67 chr15 43834079 43834229 -59660745 - RLTR9A LTR ERVK -9 359 213 4 919 297 0 0 0 chr15 43834350 43834383 -59660591 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 919 207 0 0 0 chr15 43834534 43834557 -59660417 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 4 919 603 269 192 0 chr15 43834748 43834930 -59660044 + B4A SINE B4 2 218 -74 4 919 372 130 0 0 chr15 43835007 43835076 -59659898 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 919 414 0 0 0 chr15 43835804 43835850 -59659124 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 919 507 319 67 6 chr15 43836058 43836222 -59658752 + B3A SINE B2 3 176 -22 4 919 28 0 0 0 chr15 43837126 43837154 -59657820 + AT_rich Low_complexity Low_complexity 1 28 0 4 919 568 293 65 10 chr15 43837164 43837364 -59657610 - B3 SINE B2 -5 211 1 4 919 5587 70 30 3 chr15 43837392 43838135 -59656839 - L1Md_F2 LINE L1 -4 6578 5816 4 919 6298 72 2 1 chr15 43838136 43839000 -59655974 + L1Md_F2 LINE L1 5001 5865 -18 4 919 1280 256 91 13 chr15 43839032 43839495 -59655479 - Lx8 LINE L1 -2 7471 6973 4 919 696 241 87 32 chr15 43839551 43839804 -59655170 + Lx8 LINE L1 6688 6954 -519 4 919 36228 31 2 0 chr15 43841362 43848671 -59646303 - L1Md_T LINE L1 0 6585 1 4 919 1557 22 0 0 chr15 43848756 43849112 -59645862 + (GAA)n Simple_repeat Simple_repeat 1 356 0 4 919 353 363 57 0 chr15 43849484 43849608 -59645366 + B1F SINE Alu 13 143 -6 4 919 192 276 33 44 chr15 43849797 43849888 -59645086 - L4 LINE RTE -635 1394 1305 4 919 735 191 14 14 chr15 43850359 43850497 -59644477 + B1_Mus2 SINE Alu 2 139 -8 4 919 21 0 0 0 chr15 43851031 43851052 -59643922 + AT_rich Low_complexity Low_complexity 1 21 0 4 919 23 33 0 0 chr15 43851417 43851447 -59643527 + AT_rich Low_complexity Low_complexity 1 30 0 4 919 22 0 0 0 chr15 43851710 43851732 -59643242 + AT_rich Low_complexity Low_complexity 1 22 0 4 919 688 284 17 11 chr15 43851964 43852142 -59642832 + B3 SINE B2 1 179 -37 4 919 277 133 16 32 chr15 43852142 43852204 -59642770 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 4 919 1333 99 5 10 chr15 43852650 43852843 -59642131 - B2_Mm2 SINE B2 -2 193 2 4 919 697 332 46 12 chr15 43853789 43854048 -59640926 + B4A SINE B4 24 291 -1 4 919 221 277 15 0 chr15 43854061 43854126 -59640848 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 4 919 804 89 0 29 chr15 43854460 43854599 -59640375 + (GGAA)n Simple_repeat Simple_repeat 3 137 0 4 919 240 313 132 33 chr15 43854601 43854753 -59640221 - L2 LINE L2 -2540 879 713 4 919 22 0 0 0 chr15 43855818 43855840 -59639134 + AT_rich Low_complexity Low_complexity 1 22 0 4 919 240 143 0 0 chr15 43855899 43855941 -59639033 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 919 7567 44 16 1 chr15 43856515 43857589 -59637385 - L1Md_F3 LINE L1 -12 6572 5486 4 919 1994 35 4 0 chr15 43857587 43857843 -59637131 + L1Md_F3 LINE L1 5231 5487 -396 4 919 372 237 50 20 chr15 43858449 43858548 -59636426 + PB1D9 SINE Alu 18 119 -1 4 919 512 199 251 36 chr15 43858981 43859148 -59635826 - ORR1C2 LTR MaLR -8 376 174 4 919 316 216 0 13 chr15 43859148 43859298 -59635676 + GA-rich Low_complexity Low_complexity 1 148 0 4 919 538 209 39 113 chr15 43859298 43859527 -59635447 - ORR1C2 LTR MaLR -119 255 50 4 919 1173 243 12 8 chr15 43859526 43859767 -59635207 - MTD LTR MaLR -165 254 13 4 919 22 0 0 0 chr15 43859970 43859992 -59634982 + AT_rich Low_complexity Low_complexity 1 22 0 4 919 357 206 0 0 chr15 43861186 43861278 -59633696 + (CA)n Simple_repeat Simple_repeat 2 93 0 4 919 256 61 0 0 chr15 43861413 43861446 -59633528 + RMER17B LTR ERVK 1 33 -925 4 919 559 321 43 16 chr15 43861430 43861617 -59633357 + RMER13B LTR ERVK 690 881 -27 4 919 459 52 0 0 chr15 43861643 43861701 -59633273 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 919 342 294 226 6 chr15 43861762 43861930 -59633044 - MT2A LTR ERVL -74 459 255 4 919 282 298 108 36 chr15 43861915 43862082 -59632892 - MTEb LTR MaLR -132 247 69 4 919 231 317 151 27 chr15 43861944 43862129 -59632845 - MT2A LTR ERVL -323 210 3 4 919 1495 228 101 44 chr15 43862519 43862905 -59632069 + MTD LTR MaLR 12 419 0 4 919 5936 237 9 3 chr15 43863663 43864929 -59630045 - Lx6 LINE L1 -11 7449 6177 4 919 1017 313 15 4 chr15 43866076 43866342 -59628632 + ORR1D2 LTR MaLR 99 367 -3 4 919 183 42 0 0 chr15 43866521 43866545 -59628429 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 919 2110 29 0 0 chr15 43867016 43867258 -59627716 - L1Md_F2 LINE L1 -15 6567 6326 5 919 21 0 0 0 chr15 43867955 43867976 -59626998 + AT_rich Low_complexity Low_complexity 1 21 0 5 919 540 306 218 40 chr15 43868124 43868519 -59626455 + MLT1C LTR MaLR 1 465 -2 5 919 342 115 0 0 chr15 43869425 43869477 -59625497 + (TA)n Simple_repeat Simple_repeat 1 52 0 5 919 542 122 10 0 chr15 43870614 43870712 -59624262 + (TA)n Simple_repeat Simple_repeat 2 100 0 5 919 456 19 0 0 chr15 43870713 43870766 -59624208 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 919 2255 200 59 67 chr15 43870766 43871397 -59623577 - Lx9 LINE L1 -160 7484 6859 5 919 331 283 10 61 chr15 43871405 43871503 -59623471 + 5S rRNA rRNA 4 96 -25 5 919 512 293 52 24 chr15 43871542 43871752 -59623222 + B3 SINE B2 1 216 0 5 919 3482 28 0 0 chr15 43872353 43872749 -59622225 - MTA_Mm LTR MaLR 0 396 1 5 919 9239 29 5 1 chr15 43872749 43873843 -59621131 - MTA_Mm-int LTR MaLR 0 1098 1 5 919 3425 35 0 0 chr15 43873843 43874239 -59620735 - MTA_Mm LTR MaLR 0 396 1 5 919 23 0 0 0 chr15 43874631 43874654 -59620320 + AT_rich Low_complexity Low_complexity 1 23 0 5 919 253 213 33 0 chr15 43874668 43874729 -59620245 + (TA)n Simple_repeat Simple_repeat 1 63 0 5 919 233 227 73 29 chr15 43874739 43874807 -59620167 + RLTR20C LTR ERVK 72 142 -392 5 919 13121 113 1 15 chr15 43875045 43875959 -59619015 + L1_Mm LINE L1 3820 4733 -1150 5 919 293 0 0 26 chr15 43875959 43875997 -59618977 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 5 919 13121 113 1 15 chr15 43875997 43876624 -59618350 + L1_Mm LINE L1 4734 5359 -524 5 919 266 0 29 0 chr15 43876624 43876658 -59618316 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 919 13121 113 1 15 chr15 43876658 43877208 -59617766 + L1_Mm LINE L1 5360 5881 -2 5 919 4205 109 9 6 chr15 43877236 43877892 -59617082 + L1_Mus3 LINE L1 5980 6637 -1 5 919 21 0 0 0 chr15 43877906 43877927 -59617047 + AT_rich Low_complexity Low_complexity 1 21 0 5 919 597 110 0 0 chr15 43878183 43878274 -59616700 + (GAA)n Simple_repeat Simple_repeat 2 92 0 5 919 189 318 0 0 chr15 43881198 43881242 -59613732 - L2c LINE L2 -60 3327 3284 5 919 24 0 0 0 chr15 43881862 43881886 -59613088 + AT_rich Low_complexity Low_complexity 1 24 0 5 919 222 91 0 0 chr15 43882293 43882326 -59612648 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 919 255 225 70 0 chr15 43882461 43882532 -59612442 - BLACKJACK DNA AcHobo -1334 1610 1535 5 919 632 329 22 27 chr15 43882535 43882757 -59612217 + MER58A DNA MER1_type 1 221 -3 5 919 2711 157 176 10 chr15 43883587 43884109 -59610865 + RMER19C LTR ERVK 1 609 -2 5 919 1122 195 14 9 chr15 43884902 43885125 -59609849 - URR1B DNA MER1_type 0 225 2 5 919 4611 204 30 14 chr15 43885201 43886232 -59608742 - Lx4B LINE L1 -81 6977 5930 5 919 3965 204 46 110 chr15 43886232 43886260 -59608714 - RMER1B Other Other -15 1051 1029 5 919 3328 41 5 0 chr15 43886260 43886654 -59608320 - MTA_Mm LTR MaLR 0 396 1 5 919 3965 204 46 110 chr15 43886654 43887746 -59607228 - RMER1B Other Other -38 1028 2 5 919 277 318 96 29 chr15 43891579 43891753 -59603221 - MIR SINE MIR -34 234 40 5 919 231 374 51 17 chr15 43891900 43892017 -59602957 + RMER12 LTR ERVK 695 815 -507 5 919 22 0 0 0 chr15 43893512 43893534 -59601440 + AT_rich Low_complexity Low_complexity 1 22 0 5 919 29 28 0 0 chr15 43894063 43894099 -59600875 + AT_rich Low_complexity Low_complexity 1 36 0 5 919 494 228 8 0 chr15 43894199 43894326 -59600648 + CT-rich Low_complexity Low_complexity 2 129 0 5 919 1109 88 0 0 chr15 43894326 43894473 -59600501 - B1_Mus2 SINE Alu 0 147 1 5 919 264 315 44 11 chr15 43894478 43894568 -59600406 - ORR1E LTR MaLR -253 106 14 5 919 322 252 78 96 chr15 43894575 43894742 -59600232 - L2 LINE L2 -1843 1576 1413 5 919 276 362 93 36 chr15 43894876 43895046 -59599928 - L2 LINE L2 -2228 1191 995 5 919 3892 118 151 80 chr15 43895046 43895892 -59599082 - RMER17A2 LTR ERVK 0 906 1 5 919 276 362 93 36 chr15 43895892 43896162 -59598812 - L2 LINE L2 -2425 994 727 5 919 491 269 136 15 chr15 43896164 43896296 -59598678 + B3 SINE B2 1 148 -68 5 919 21 57 0 0 chr15 43896339 43896374 -59598600 + AT_rich Low_complexity Low_complexity 1 35 0 5 919 180 293 0 0 chr15 43896543 43896584 -59598390 - L2 LINE L2 -2935 484 444 5 919 581 331 99 25 chr15 43896620 43897054 -59597920 + MLT1D LTR MaLR 40 505 0 5 919 238 313 135 68 chr15 43897084 43897276 -59597698 - L2 LINE L2 -3014 405 201 5 919 879 343 52 3 chr15 43897330 43897678 -59597296 + MLT1A0 LTR MaLR 1 365 0 5 919 602 207 0 6 chr15 43897829 43898009 -59596965 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 919 297 345 85 65 chr15 43898631 43898972 -59596002 - ORR1D2 LTR MaLR -13 357 10 5 919 28 0 0 0 chr15 43899819 43899847 -59595127 + AT_rich Low_complexity Low_complexity 1 28 0 5 919 239 275 41 55 chr15 43900193 43900266 -59594708 + MLT1B LTR MaLR 1 72 -318 5 919 338 214 11 56 chr15 43900518 43900607 -59594367 + MLT1B LTR MaLR 298 382 -8 5 919 458 305 45 0 chr15 43900863 43901017 -59593957 - MER67D LTR ERV1 -203 311 151 5 919 415 323 103 52 chr15 43901044 43901354 -59593620 - MER2B DNA MER2_type 0 336 11 5 919 453 261 17 0 chr15 43901345 43901464 -59593510 - MER67D LTR ERV1 -375 139 19 5 919 902 95 38 6 chr15 43901761 43901920 -59593054 + (GAAA)n Simple_repeat Simple_repeat 2 165 0 5 919 882 59 2 2 chr15 43902742 43902869 -59592105 - B1_Mus1 SINE Alu -23 127 1 5 919 2904 35 3 3 chr15 43903474 43903820 -59591154 - ORR1A0 LTR MaLR 0 346 1 5 919 359 96 36 12 chr15 43904086 43904170 -59590804 + (TA)n Simple_repeat Simple_repeat 2 87 0 5 919 591 15 0 0 chr15 43904611 43904679 -59590295 + (GA)n Simple_repeat Simple_repeat 2 69 0 5 919 25 0 0 0 chr15 43905974 43905999 -59588975 + AT_rich Low_complexity Low_complexity 1 25 0 5 919 387 60 0 0 chr15 43906012 43906062 -59588912 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 919 2618 161 28 11 chr15 43907317 43907781 -59587193 + RLTR11A2 LTR ERVK 56 527 0 5 919 655 297 31 15 chr15 43907876 43908071 -59586903 + B3A SINE B2 1 198 0 5 919 407 313 54 65 chr15 43908298 43908575 -59586399 - L1ME3A LINE L1 -1 6172 5899 5 114 27288 49 3 1 chr15 43908625 43912769 -59582205 - L1Md_F3 LINE L1 -13 6571 2415 5 920 502 292 82 46 chr15 43912858 43913077 -59581897 - Lx8 LINE L1 -4 7469 7243 5 920 1935 140 22 104 chr15 43913228 43913642 -59581332 + ORR1B1 LTR MaLR 2 381 -13 5 920 3245 180 19 22 chr15 43913651 43914293 -59580681 + ORR1B1-int LTR MaLR 1 640 -1323 5 920 663 176 351 15 chr15 43914335 43914433 -59580541 + MT2B LTR ERVL 1 166 -435 5 920 400 281 102 34 chr15 43914433 43914551 -59580423 + B1_Mus2 SINE Alu 3 128 -19 5 920 1064 239 170 33 chr15 43914563 43915080 -59579894 + RMER20B LTR ERVK 10 597 -30 5 920 294 325 0 24 chr15 43915083 43915165 -59579809 + RMER20B LTR ERVK 525 604 -23 5 920 2919 178 100 65 chr15 43915165 43916179 -59578795 + ORR1B1-int LTR MaLR 855 1894 -69 5 920 1887 192 50 3 chr15 43916179 43916555 -59578419 + ORR1B1 LTR MaLR 1 394 0 5 920 273 253 0 62 chr15 43916693 43916773 -59578201 - L1VL1 LINE L1 -6300 122 48 5 920 2911 98 20 0 chr15 43916773 43917179 -59577795 + L1_Mus1 LINE L1 6152 6565 -2 5 920 24 0 0 0 chr15 43917758 43917782 -59577192 + AT_rich Low_complexity Low_complexity 1 24 0 5 920 751 149 6 6 chr15 43918032 43918201 -59576773 + CT-rich Low_complexity Low_complexity 2 170 0 5 920 36912 31 2 7 chr15 43918309 43923551 -59571423 + L1Md_T LINE L1 379 5586 -297 5 920 8370 36 0 0 chr15 43923551 43924547 -59570427 + L1Md_T LINE L1 5587 6582 0 5 920 6494 80 9 1 chr15 43925017 43925927 -59569047 - L1_Mur1 LINE L1 -1362 4524 3608 5 920 2216 189 32 56 chr15 43925982 43926589 -59568385 + RLTR12B LTR ERVK 1 559 -9 5 920 295 163 116 0 chr15 43926594 43926680 -59568294 + Lx6 LINE L1 7359 7454 -6 5 920 4062 160 46 35 chr15 43926990 43927862 -59567112 + RLTR13D5 LTR ERVK 1 897 -5 5 920 689 217 72 0 chr15 43928965 43929103 -59565871 + B1_Mur1 SINE Alu 2 149 0 5 920 22 56 0 0 chr15 43930333 43930369 -59564605 + AT_rich Low_complexity Low_complexity 1 36 0 5 920 217 325 51 13 chr15 43930694 43930772 -59564202 + L2b LINE L2 3270 3350 -25 5 920 370 151 0 0 chr15 43931264 43931337 -59563637 - Lx2A1 LINE L1 -3 7005 6933 5 920 399 284 168 48 chr15 43932129 43932521 -59562453 + Lx9 LINE L1 7206 7644 0 5 920 37 0 0 0 chr15 43932522 43932559 -59562415 + AT_rich Low_complexity Low_complexity 1 37 0 5 920 310 247 14 0 chr15 43933424 43933497 -59561477 - MLT1C LTR MaLR -393 74 1 5 920 374 332 58 58 chr15 43933715 43933923 -59561051 + MLT1G1 LTR MaLR 372 579 0 5 920 223 304 0 0 chr15 43934033 43934102 -59560872 - PB1D10 SINE Alu -7 110 42 5 920 399 127 0 0 chr15 43934800 43934863 -59560111 + (GA)n Simple_repeat Simple_repeat 2 64 0 5 920 387 141 0 0 chr15 43935569 43935633 -59559341 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 920 585 324 28 0 chr15 43935902 43936047 -59558927 - B3 SINE B2 -67 149 1 5 920 33 25 0 0 chr15 43936076 43936116 -59558858 + AT_rich Low_complexity Low_complexity 1 40 0 5 920 4775 240 103 9 chr15 43936629 43937830 -59557144 + Lx9 LINE L1 6060 7516 -128 5 920 474 18 0 0 chr15 43937830 43937885 -59557089 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 920 4775 225 104 7 chr15 43937885 43938004 -59556970 + Lx9 LINE L1 7517 7643 -1 5 920 372 94 0 0 chr15 43938858 43938911 -59556063 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 920 210 71 0 0 chr15 43938911 43938939 -59556035 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 920 316 348 112 30 chr15 43939422 43939591 -59555383 + L1MC4 LINE L1 6625 6807 -1154 5 920 2128 55 7 0 chr15 43939670 43939941 -59555033 - L1Md_F2 LINE L1 -498 6084 5812 5 920 4000 39 2 6 chr15 43939942 43940428 -59554546 + L1Md_F2 LINE L1 6099 6582 0 5 920 1095 275 50 47 chr15 43940450 43940809 -59554165 + MTEa LTR MaLR 20 379 0 5 920 253 337 109 17 chr15 43940877 43941052 -59553922 - LTR40a LTR ERVL -323 196 6 5 920 258 361 133 15 chr15 43941522 43941657 -59553317 + MER45A DNA Tip100 11 161 -17 5 920 1108 295 14 11 chr15 43942138 43942419 -59552555 - B4A SINE B4 0 292 11 5 920 250 283 119 6 chr15 43942663 43942823 -59552151 - L1MC4 LINE L1 -153 7889 7712 5 920 377 367 34 48 chr15 43942872 43943164 -59551810 + L1MC4 LINE L1 6875 7162 -880 5 920 23 54 0 0 chr15 43944921 43944958 -59550016 + AT_rich Low_complexity Low_complexity 1 37 0 5 920 289 216 0 0 chr15 43945344 43945395 -59549579 + RLTR42-int LTR ERVK 1045 1095 -4427 5 920 1080 96 0 7 chr15 43945996 43946143 -59548831 + B1_Mm SINE Alu 1 146 -1 6 920 23 33 0 0 chr15 43946363 43946393 -59548581 + AT_rich Low_complexity Low_complexity 1 30 0 6 920 15177 137 276 6 chr15 43946506 43950478 -59544496 + L1VL4 LINE L1 486 5693 -190 6 920 296 217 43 0 chr15 43950487 43950556 -59544418 + RLTR19-int LTR ERVK 2722 2793 -3344 6 920 1233 196 60 62 chr15 43950654 43951007 -59543967 + RLTR19-int LTR ERVK 3483 3834 -2303 6 920 33615 83 11 3 chr15 43951064 43957247 -59537727 - L1Md_F2 LINE L1 0 6582 353 6 920 463 198 0 29 chr15 43957262 43957366 -59537608 + RLTR19-int LTR ERVK 3861 3961 -2176 6 920 459 0 0 0 chr15 43957382 43957433 -59537541 + (TC)n Simple_repeat Simple_repeat 2 52 0 6 920 243 0 0 0 chr15 43957433 43957459 -59537515 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 920 906 161 92 0 chr15 43957495 43957669 -59537305 - B2_Mm2 SINE B2 -2 193 4 6 920 621 40 0 0 chr15 43957766 43957842 -59537132 + (TTTC)n Simple_repeat Simple_repeat 2 77 0 6 920 1685 71 4 30 chr15 43957847 43958079 -59536895 - L1_Mus1 LINE L1 -1 6566 6341 6 920 225 0 0 0 chr15 43958097 43958122 -59536852 + (GA)n Simple_repeat Simple_repeat 2 26 0 6 920 330 258 67 52 chr15 43958382 43958517 -59536457 + RLTR19-int LTR ERVK 4239 4375 -1762 6 920 22 35 0 0 chr15 43961167 43961196 -59533778 + AT_rich Low_complexity Low_complexity 1 29 0 6 920 2652 94 57 63 chr15 43961619 43962108 -59532866 - RLTR44D LTR ERVK 0 486 1 6 920 2446 190 41 0 chr15 43962399 43962842 -59532132 + MT2A LTR ERVL 1 461 -72 6 920 27 73 0 0 chr15 43963395 43963450 -59531524 + AT_rich Low_complexity Low_complexity 1 55 0 6 920 486 0 0 0 chr15 43963528 43963582 -59531392 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 6 920 28 29 0 0 chr15 43963588 43963623 -59531351 + AT_rich Low_complexity Low_complexity 1 35 0 6 920 705 303 164 17 chr15 43963781 43964257 -59530717 - MER90a LTR ERV1 0 614 69 6 920 3241 161 29 20 chr15 43964319 43964909 -59530065 - Lx2B LINE L1 -1 6999 6405 6 920 305 238 188 7 chr15 43966530 43966674 -59528300 + L1MC3 LINE L1 6933 7102 -683 6 920 248 241 0 0 chr15 43966675 43966733 -59528241 + L1MC3 LINE L1 7627 7684 -101 6 920 666 269 118 10 chr15 43967961 43968006 -59526968 - B3 SINE B2 0 216 164 6 920 375 23 0 0 chr15 43968006 43968050 -59526924 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 920 666 269 118 10 chr15 43968050 43968199 -59526775 - B3 SINE B2 -53 163 2 6 920 8976 11 0 0 chr15 43968383 43969932 -59525042 - L1Md_T LINE L1 0 6582 5034 6 920 14202 19 0 0 chr15 43969929 43971584 -59523390 + L1Md_T LINE L1 3370 5024 -859 6 920 797 197 433 4 chr15 43972515 43972715 -59522259 + Lx9 LINE L1 7230 7512 -132 6 920 392 0 21 0 chr15 43972715 43972763 -59522211 + (TATG)n Simple_repeat Simple_repeat 2 50 0 6 920 533 205 19 25 chr15 43972763 43972892 -59522082 + Lx9 LINE L1 7513 7644 0 6 920 21 71 0 0 chr15 43974611 43974653 -59520321 + AT_rich Low_complexity Low_complexity 1 42 0 6 920 369 0 0 0 chr15 43974664 43974705 -59520269 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 920 446 311 37 15 chr15 43974744 43974878 -59520096 - RSINE1 SINE B4 -26 139 3 6 920 462 49 0 0 chr15 43975805 43975866 -59519108 + (TC)n Simple_repeat Simple_repeat 2 62 0 6 920 306 0 0 0 chr15 43975866 43975899 -59519075 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 920 427 291 5 117 chr15 43977088 43977310 -59517664 + B3A SINE B2 2 198 0 6 920 225 0 0 0 chr15 43977428 43977453 -59517521 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 6 920 231 308 20 34 chr15 43977608 43977756 -59517218 - L1M5 LINE L1 -3690 2456 2311 6 920 533 314 46 0 chr15 43977761 43977955 -59517019 + B3 SINE B2 4 206 -10 6 920 1857 207 48 13 chr15 43977980 43978376 -59516598 - MTC LTR MaLR -11 410 1 6 920 292 282 136 5 chr15 43978555 43978657 -59516317 + PB1D10 SINE Alu 1 115 -5 6 920 314 278 118 48 chr15 43979787 43980059 -59514915 + L1M5 LINE L1 3688 3978 -2168 6 920 23 0 0 0 chr15 43980475 43980498 -59514476 + AT_rich Low_complexity Low_complexity 1 23 0 6 920 330 294 79 0 chr15 43980775 43980901 -59514073 + L1M5 LINE L1 5578 5713 -527 6 920 486 185 66 53 chr15 43981503 43981686 -59513288 - Lx7 LINE L1 -4 7692 7563 6 920 494 207 0 4 chr15 43981731 43981966 -59513008 + (CA)n Simple_repeat Simple_repeat 1 233 0 6 920 1135 219 62 53 chr15 43981966 43982289 -59512685 - Lx7 LINE L1 -239 7457 7132 6 920 607 202 30 29 chr15 43982280 43982421 -59512553 - Lx7 LINE L1 -799 6897 6740 6 920 252 256 96 81 chr15 43982680 43982816 -59512158 - ORR1E LTR MaLR -143 216 79 6 920 234 336 17 96 chr15 43982871 43982986 -59511988 - ORR1E LTR MaLR -271 108 3 6 920 238 257 113 14 chr15 43983383 43983454 -59511520 - ID4_ SINE ID -3 80 3 6 920 353 194 18 64 chr15 43983559 43983669 -59511305 + MER53 DNA hAT 80 184 -9 6 920 418 229 10 0 chr15 43983591 43983687 -59511287 - MER53 DNA hAT -96 97 1 6 920 504 0 0 0 chr15 43983846 43983902 -59511072 + (TC)n Simple_repeat Simple_repeat 2 57 0 6 920 189 0 0 0 chr15 43983911 43983932 -59511042 + (ATATG)n Simple_repeat Simple_repeat 4 24 0 6 920 243 0 0 0 chr15 43984110 43984137 -59510837 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 920 459 0 0 0 chr15 43984137 43984187 -59510787 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 920 236 233 40 65 chr15 43984270 43984363 -59510611 + Charlie8 DNA MER1_type 2339 2428 0 6 920 336 155 35 0 chr15 43984578 43984636 -59510338 + MT2A LTR ERVL 1 60 -473 6 920 264 276 48 65 chr15 43985009 43985133 -59509841 - L4 LINE RTE -2 2027 1906 6 920 25 31 0 0 chr15 43985859 43985891 -59509083 + AT_rich Low_complexity Low_complexity 1 32 0 6 920 462 75 0 0 chr15 43986053 43986120 -59508854 + (CA)n Simple_repeat Simple_repeat 1 67 0 6 920 701 320 56 0 chr15 43986206 43986403 -59508571 - MER58A DNA MER1_type -16 208 1 6 920 24 77 0 0 chr15 43986638 43986690 -59508284 + AT_rich Low_complexity Low_complexity 1 52 0 6 920 722 221 0 21 chr15 43986922 43987065 -59507909 + B1_Mur4 SINE Alu 11 150 0 6 920 35 41 0 0 chr15 43987352 43987401 -59507573 + AT_rich Low_complexity Low_complexity 1 49 0 6 920 4791 49 0 5 chr15 43987608 43988202 -59506772 + L1Md_F2 LINE L1 5980 6570 -12 6 920 470 243 6 18 chr15 43988221 43988374 -59506600 + ORR1C2 LTR MaLR 155 339 -55 6 920 237 286 50 140 chr15 43988805 43988984 -59505990 - RLTR40 LTR ERVK -471 346 184 6 920 282 94 47 0 chr15 43989153 43989217 -59505757 + (CAAAA)n Simple_repeat Simple_repeat 1 67 0 6 920 351 60 0 0 chr15 43989382 43989432 -59505542 + (T)n Simple_repeat Simple_repeat 1 50 0 6 920 1834 228 64 56 chr15 43990351 43990848 -59504126 + RLTR20B3 LTR ERVK 21 521 -56 6 920 4635 78 6 0 chr15 43991126 43991924 -59503050 - L1_Mus1 LINE L1 -534 6033 5233 6 920 3983 83 0 9 chr15 43991924 43992459 -59502515 + L1_Mus1 LINE L1 6038 6567 0 6 920 237 83 0 0 chr15 43992876 43992912 -59502062 + (GA)n Simple_repeat Simple_repeat 1 36 0 6 920 1754 170 101 3 chr15 43993074 43993422 -59501552 - RMER1C Other Other -1 1341 960 6 920 2320 287 36 48 chr15 43993447 43993881 -59501093 - L1_Mur3 LINE L1 -105 5775 5351 6 920 4622 66 0 12 chr15 43993881 43994480 -59500494 - L1_Mus1 LINE L1 -3 6564 5973 6 920 2320 287 36 48 chr15 43994480 43994949 -59500025 - L1_Mur3 LINE L1 -530 5350 4883 6 920 2592 106 28 5 chr15 43994949 43995339 -59499635 + MTB LTR MaLR 1 399 -1 6 920 2320 287 36 48 chr15 43995339 43995355 -59499619 - L1_Mur3 LINE L1 -998 4882 4866 6 920 351 0 0 0 chr15 43995361 43995400 -59499574 + (TC)n Simple_repeat Simple_repeat 1 39 0 6 920 339 25 0 0 chr15 43995400 43995440 -59499534 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 920 474 331 68 0 chr15 43995671 43995804 -59499170 - ID_B1 SINE B4 0 224 83 6 920 342 147 0 0 chr15 43995859 43995927 -59499047 + (GA)n Simple_repeat Simple_repeat 1 68 0 6 920 263 312 100 72 chr15 43996188 43996437 -59498537 + ORR1E LTR MaLR 63 318 -41 6 920 4860 120 31 4 chr15 43997164 43998239 -59496735 + L1VL4 LINE L1 199 1300 -2259 6 920 1425 188 0 0 chr15 43998226 43998476 -59496498 + L1Md_F LINE L1 387 636 -5980 6 920 6170 104 46 2 chr15 43998466 44000000 -59494974 + L1Md_F LINE L1 503 2106 -3777 6 920 9285 70 79 11 chr15 44000000 44001421 -59493553 + L1Md_F2 LINE L1 2107 3624 -2259 1 920 1204 46 0 0 chr15 44001420 44001573 -59493401 + L1Md_F2 LINE L1 5431 5583 -300 1 920 7040 97 1 9 chr15 44001576 44002567 -59492407 + L1Md_F2 LINE L1 5587 6569 -13 1 920 6269 81 22 9 chr15 44002586 44003591 -59491383 + MusHAL1 LINE L1 437 1454 -1258 2 920 1181 216 130 2 chr15 44003591 44003994 -59490980 - RLTR17 LTR ERVK -2 690 162 3 920 12259 148 38 18 chr15 44003994 44007042 -59487932 + Lx LINE L1 3544 6652 -2 4 920 417 282 60 53 chr15 44010487 44010637 -59484337 + B4 SINE B4 73 223 -69 5 920 553 188 85 5 chr15 44010507 44010639 -59484335 + B1_Mur1 SINE Alu 13 149 0 6 920 528 333 64 27 chr15 44011594 44011970 -59483004 - L1MC1 LINE L1 -18 6315 5926 7 920 362 282 188 23 chr15 44011990 44012208 -59482766 - L1MC1 LINE L1 -670 5663 5410 7 920 400 327 78 25 chr15 44012706 44012957 -59482017 - ORR1E LTR MaLR -99 271 1 8 920 268 348 42 42 chr15 44013294 44013459 -59481515 - MIR SINE MIR -44 218 54 9 920 201 39 0 0 chr15 44014903 44014929 -59480045 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1 920 319 208 13 53 chr15 44014966 44015042 -59479932 - L1MEg LINE L1 -4156 1928 1856 1 920 348 314 62 31 chr15 44015365 44015467 -59479507 + MER58B DNA MER1_type 106 213 -128 1 920 2905 118 55 2 chr15 44015467 44015936 -59479038 - Lx2 LINE L1 0 6997 6504 1 920 348 314 62 31 chr15 44015936 44015994 -59478980 + MER58B DNA MER1_type 214 271 -70 1 920 471 252 10 0 chr15 44016124 44016227 -59478747 + B3A SINE B2 3 106 -92 1 920 650 295 82 37 chr15 44016577 44016845 -59478129 + B4A SINE B4 5 284 -8 1 920 345 24 0 0 chr15 44016878 44016920 -59478054 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 920 218 320 39 0 chr15 44017979 44018057 -59476917 - MIRm SINE MIR -103 173 93 1 920 357 376 6 47 chr15 44018104 44018274 -59476700 - RSINE1 SINE B4 -1 164 2 1 920 260 348 41 35 chr15 44019032 44019202 -59475772 + L2c LINE L2 3210 3380 -7 1 920 503 262 174 2 chr15 44019525 44019708 -59475266 + MIR SINE MIR 32 253 -15 2 920 245 333 43 106 chr15 44020280 44020421 -59474553 - MIRc SINE MIR -112 156 25 2 920 1801 183 115 22 chr15 44021269 44021677 -59473297 - RLTR41 LTR ERV1 0 446 1 2 920 565 261 177 10 chr15 44022202 44022566 -59472408 + L1MD LINE L1 2461 2882 -3264 2 920 565 302 71 43 chr15 44022619 44022872 -59472102 + B4A SINE B4 9 268 -24 2 920 315 0 0 0 chr15 44022878 44022913 -59472061 + (TC)n Simple_repeat Simple_repeat 1 35 0 2 920 303 28 0 0 chr15 44022913 44022948 -59472026 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 920 307 322 96 118 chr15 44026202 44026473 -59468501 - MER102b DNA MER1_type -67 274 10 2 920 348 267 72 22 chr15 44027068 44027173 -59467801 - PB1D10 SINE Alu -2 118 6 2 920 26 0 0 0 chr15 44027186 44027212 -59467762 + AT_rich Low_complexity Low_complexity 1 26 0 2 920 288 0 0 0 chr15 44027601 44027633 -59467341 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 920 387 0 0 0 chr15 44027633 44027675 -59467299 + (GA)n Simple_repeat Simple_repeat 1 43 0 3 920 342 0 0 0 chr15 44028340 44028378 -59466596 + (A)n Simple_repeat Simple_repeat 1 38 0 3 920 1410 143 5 0 chr15 44031219 44031442 -59463532 - URR1B DNA MER1_type 0 225 2 3 920 312 318 0 33 chr15 44033054 44033145 -59461829 + MIRb SINE MIR 109 196 -72 3 920 643 195 52 107 chr15 44033252 44033522 -59461452 + Lx9 LINE L1 7385 7639 -5 3 920 423 68 0 0 chr15 44033524 44033583 -59461391 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 920 827 153 23 0 chr15 44034204 44034335 -59460639 + B1_Mur4 SINE Alu 2 135 -15 3 920 16803 84 15 48 chr15 44034592 44036615 -59458359 - L1VL4 LINE L1 -4 3555 1506 3 920 916 82 0 0 chr15 44036615 44036737 -59458237 + B1_Mus1 SINE Alu 3 124 -24 3 920 528 16 0 0 chr15 44036737 44036798 -59458176 + (GA)n Simple_repeat Simple_repeat 1 61 0 4 920 16803 106 10 22 chr15 44036798 44038253 -59456721 - L1VL4 LINE L1 -2054 1505 44 3 920 7905 36 2 4 chr15 44038262 44039536 -59455438 - L1Md_F2 LINE L1 -1 6581 5311 4 14 209 340 28 46 chr15 44040130 44040238 -59454736 + L2c LINE L2 2919 3024 -363 4 921 323 342 36 30 chr15 44040564 44040730 -59454244 + MER63A DNA AcHobo 1 167 -43 4 921 626 0 14 0 chr15 44041290 44041364 -59453610 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 4 921 181 351 0 0 chr15 44041425 44041482 -59453492 - L2a LINE L2 -1 3425 3369 4 921 1449 152 16 65 chr15 44041512 44041821 -59453153 - RLTRETN_Mm LTR ERVK -28 294 1 4 921 665 132 80 7 chr15 44041821 44041958 -59453016 - MMETn-int LTR ERVK 0 4844 4698 4 921 264 247 56 11 chr15 44041958 44042048 -59452926 - RLTR13D6 LTR ERVK -462 440 347 4 921 1153 138 21 39 chr15 44042049 44042283 -59452691 - MMETn-int LTR ERVK -239 4605 4376 4 921 297 89 0 0 chr15 44042434 44042479 -59452495 + (T)n Simple_repeat Simple_repeat 1 45 0 4 921 833 48 0 0 chr15 44042479 44042584 -59452390 - B1_Mus2 SINE Alu 0 147 43 4 921 293 187 76 51 chr15 44042523 44042602 -59452372 - RLTR25A LTR ERVK -521 582 502 5 921 1252 73 47 10 chr15 44042802 44042995 -59451979 + L1_Mus3 LINE L1 6425 6624 -14 5 921 876 124 0 0 chr15 44042995 44043132 -59451842 + (GGAGA)n Simple_repeat Simple_repeat 5 141 0 5 921 22 35 0 0 chr15 44043697 44043726 -59451248 + AT_rich Low_complexity Low_complexity 1 29 0 5 921 507 33 0 0 chr15 44043733 44043794 -59451180 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 921 1489 215 128 14 chr15 44043794 44044224 -59450750 + RMER6D LTR ERVK 6 484 -236 5 921 1507 171 146 3 chr15 44044459 44044788 -59450186 - ORR1C1 LTR MaLR 0 378 3 5 921 584 13 0 13 chr15 44044903 44044982 -59449992 - L1Md_T LINE L1 0 6582 6505 5 921 186 200 53 35 chr15 44045571 44045628 -59449346 + MIRb SINE MIR 111 168 -100 5 921 24 0 0 0 chr15 44046295 44046319 -59448655 + AT_rich Low_complexity Low_complexity 1 24 0 5 921 231 243 40 26 chr15 44047832 44047908 -59447066 - MIRb SINE MIR -8 260 184 6 921 342 350 60 16 chr15 44048732 44048915 -59446059 + MIR SINE MIR 47 237 -25 6 921 334 258 43 53 chr15 44049945 44050039 -59444935 + ID_B1 SINE B4 79 171 -53 6 921 401 260 72 10 chr15 44049958 44050055 -59444919 + PB1D10 SINE Alu 7 109 -8 6 921 22 56 0 0 chr15 44051531 44051567 -59443407 + AT_rich Low_complexity Low_complexity 1 36 0 6 921 2198 95 31 16 chr15 44051740 44052062 -59442912 + ORR1A2 LTR MaLR 1 327 0 6 921 309 26 0 0 chr15 44052387 44052425 -59442549 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 6 921 182 302 0 19 chr15 44053389 44053443 -59441531 - MIRb SINE MIR -2 266 214 6 921 1251 254 97 81 chr15 44054334 44054842 -59440132 + RLTR20B2 LTR ERVK 21 578 0 6 921 204 314 83 76 chr15 44054951 44055096 -59439878 + MIRc SINE MIR 37 182 -86 6 921 392 0 21 0 chr15 44055214 44055262 -59439712 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 921 486 0 0 0 chr15 44055527 44055581 -59439393 + (TC)n Simple_repeat Simple_repeat 2 55 0 7 921 240 35 0 0 chr15 44055613 44055642 -59439332 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 921 550 289 62 14 chr15 44055644 44055788 -59439186 - B3A SINE B2 -47 151 1 7 921 467 62 0 15 chr15 44055821 44055887 -59439087 - L1Md_A LINE L1 -408 6174 6110 7 921 605 0 13 0 chr15 44055887 44055965 -59439009 + L1Md_T LINE L1 6504 6582 0 7 921 418 88 43 14 chr15 44055965 44055976 -59438998 - L1Md_A LINE L1 -472 6110 6097 7 921 441 60 90 0 chr15 44055971 44056038 -59438936 - L1_Mur1 LINE L1 -768 5118 5046 7 921 4408 97 17 23 chr15 44056038 44056683 -59438291 + Lx3_Mus LINE L1 6368 7008 -1 7 921 429 114 0 0 chr15 44056837 44056907 -59438067 + Lx3A LINE L1 6900 6969 -12 7 921 279 54 0 0 chr15 44056907 44056944 -59438030 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 7 921 450 299 113 25 chr15 44057241 44057604 -59437370 + L1MB7 LINE L1 5762 6156 -28 8 921 180 0 0 0 chr15 44057651 44057671 -59437303 + (TA)n Simple_repeat Simple_repeat 2 21 0 8 921 505 315 58 59 chr15 44057671 44057959 -59437015 + L1MC3 LINE L1 7310 7696 -186 8 921 546 302 107 20 chr15 44058387 44058629 -59436345 + B4A SINE B4 2 269 -23 8 921 444 19 0 0 chr15 44058629 44058682 -59436292 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 921 716 199 0 15 chr15 44059406 44059539 -59435435 - B1_Mur4 SINE Alu -2 148 18 8 921 3287 43 5 0 chr15 44059983 44060377 -59434597 - MTA_Mm LTR MaLR 0 396 1 8 921 288 0 0 0 chr15 44061447 44061479 -59433495 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 921 186 43 0 0 chr15 44061650 44061673 -59433301 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 8 921 1086 22 0 21 chr15 44061678 44061819 -59433155 - L1Md_F3 LINE L1 -17 6567 6430 8 921 351 0 0 0 chr15 44062868 44062907 -59432067 + (TTA)n Simple_repeat Simple_repeat 2 40 0 9 921 198 0 0 0 chr15 44063220 44063242 -59431732 + (CA)n Simple_repeat Simple_repeat 2 23 0 9 921 24 67 0 0 chr15 44064194 44064239 -59430735 + AT_rich Low_complexity Low_complexity 1 45 0 9 921 22 0 0 0 chr15 44064504 44064526 -59430448 + AT_rich Low_complexity Low_complexity 1 22 0 9 921 22 56 0 0 chr15 44064920 44064956 -59430018 + AT_rich Low_complexity Low_complexity 1 36 0 9 921 339 113 0 0 chr15 44066136 44066189 -59428785 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 9 921 228 230 39 39 chr15 44067568 44067645 -59427329 + Zaphod2 DNA Tip100 2150 2226 -1298 9 921 432 0 0 0 chr15 44068030 44068078 -59426896 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 921 180 125 0 0 chr15 44068568 44068600 -59426374 + (TA)n Simple_repeat Simple_repeat 2 33 0 9 921 31954 85 24 18 chr15 44069020 44074264 -59420710 - Lx3_Mus LINE L1 -8 7001 1745 9 921 3289 21 0 0 chr15 44074264 44074644 -59420330 - L1Md_A LINE L1 0 6582 6203 1 921 31954 141 23 30 chr15 44074644 44075773 -59419201 - Lx3_Mus LINE L1 -4142 1744 130 9 921 1053 176 16 0 chr15 44075773 44075960 -59419014 - RLTR15 LTR ERVK -23 336 147 1 921 39227 28 0 7 chr15 44075960 44082031 -59412943 - L1Md_T LINE L1 -11 6571 546 1 921 399 219 51 72 chr15 44082031 44082169 -59412805 - RLTR15 LTR ERVK -172 187 53 1 921 525 16 0 0 chr15 44082175 44082237 -59412737 + (TTTC)n Simple_repeat Simple_repeat 4 65 0 1 921 1833 106 7 4 chr15 44082239 44082513 -59412461 - L1_Mus3 LINE L1 -14 6624 6350 1 921 10206 117 15 7 chr15 44082513 44084181 -59410793 - L1_Mus3 LINE L1 -669 5969 4281 1 921 3467 130 6 6 chr15 44084181 44084769 -59410205 - L1_Mus3 LINE L1 0 6638 6095 1 921 10206 132 19 8 chr15 44084769 44084847 -59410127 - L1_Mus3 LINE L1 -1603 4280 4205 1 921 435 94 16 0 chr15 44084847 44084911 -59410063 - RLTR15 LTR ERVK -294 65 1 1 921 2151 178 27 24 chr15 44085764 44086178 -59408796 - Lx2 LINE L1 -3 6994 6580 1 921 25 31 0 0 chr15 44086693 44086725 -59408249 + AT_rich Low_complexity Low_complexity 1 32 0 1 921 259 100 50 0 chr15 44086859 44086919 -59408055 + (CAAAAA)n Simple_repeat Simple_repeat 2 64 0 1 921 483 278 65 36 chr15 44087497 44087665 -59407309 + B3A SINE B2 26 198 0 1 921 1108 248 20 38 chr15 44088367 44088660 -59406314 + MuRRS4-int LTR ERV1 3661 3948 -1115 1 921 322 339 91 34 chr15 44089562 44089825 -59405149 + MuRRS4-int LTR ERV1 4663 4940 -123 1 921 378 169 28 0 chr15 44089927 44089998 -59404976 + RLTR47_MM LTR ERV1 48 120 -412 1 921 264 193 91 162 chr15 44090012 44090024 -59404950 - PB1 SINE Alu 0 127 121 1 921 657 0 0 0 chr15 44090024 44090097 -59404877 + (GTTTG)n Simple_repeat Simple_repeat 2 74 0 1 921 426 120 234 14 chr15 44090097 44090183 -59404791 - B1_Mm SINE Alu -8 139 36 1 921 1460 85 194 0 chr15 44090183 44090431 -59404543 + RLTR47_MM LTR ERV1 145 440 -92 1 921 243 0 0 0 chr15 44091260 44091287 -59403687 + (A)n Simple_repeat Simple_repeat 1 27 0 1 921 209 111 44 0 chr15 44091925 44091970 -59403004 + A-rich Low_complexity Low_complexity 3 49 0 1 921 1482 267 161 27 chr15 44094000 44094621 -59400353 - Lx8 LINE L1 0 7473 6770 1 921 2294 162 50 7 chr15 44095638 44096042 -59398932 - MTC LTR MaLR 0 421 1 1 921 270 0 0 0 chr15 44096294 44096324 -59398650 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 921 269 268 23 58 chr15 44096399 44096486 -59398488 + RSINE1 SINE B4 13 96 -69 1 921 541 269 0 66 chr15 44096749 44096900 -59398074 + B1_Mur1 SINE Alu 2 142 -7 1 921 277 303 30 0 chr15 44096925 44096991 -59397983 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 1 921 302 312 71 0 chr15 44097032 44097173 -59397801 + L1M5 LINE L1 4481 4631 -1515 1 921 205 328 0 16 chr15 44097250 44097312 -59397662 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 921 2639 172 2 0 chr15 44097950 44098414 -59396560 - L1_Mm LINE L1 -773 5110 4646 1 921 5663 76 26 4 chr15 44098414 44099183 -59395791 + L1_Mus3 LINE L1 5847 6632 -6 1 921 1848 181 172 4 chr15 44099542 44100002 -59394972 - Lx9 LINE L1 0 7644 7108 1 921 25 83 0 0 chr15 44100128 44100188 -59394786 + AT_rich Low_complexity Low_complexity 1 60 0 1 921 1814 199 117 76 chr15 44100551 44101208 -59393766 + RMER6C LTR ERVK 3 686 -4 1 921 1283 82 32 11 chr15 44101211 44101397 -59393577 + B2_Mm2 SINE B2 2 191 -4 1 921 1604 186 196 0 chr15 44101555 44101724 -59393250 - Lx2B LINE L1 -920 6080 5895 1 921 1140 62 0 0 chr15 44101724 44101869 -59393105 - B1_Mm SINE Alu -2 145 1 1 921 7499 96 44 8 chr15 44101869 44103010 -59391964 - Lx2B LINE L1 -1106 5894 4684 1 921 4999 149 36 17 chr15 44103010 44103888 -59391086 + Lx3C LINE L1 6079 6973 -3 1 921 570 289 174 32 chr15 44104120 44104367 -59390607 - MTD LTR MaLR -15 404 123 1 921 2231 217 29 84 chr15 44104380 44105040 -59389934 - RMER6D LTR ERVK -6 714 1 1 921 316 279 104 19 chr15 44105042 44105148 -59389826 - MTD LTR MaLR -304 115 1 1 921 396 204 28 0 chr15 44105186 44105294 -59389680 - Tigger7 DNA MER2_type -100 2391 2281 1 921 242 275 35 28 chr15 44105394 44105536 -59389438 - L1MC4 LINE L1 -209 7833 7691 1 921 809 127 8 0 chr15 44106036 44106170 -59388804 + (TTTC)n Simple_repeat Simple_repeat 2 136 0 1 921 639 344 80 54 chr15 44107266 44107616 -59387358 - ORR1E LTR MaLR 0 359 1 1 921 243 88 0 0 chr15 44107724 44107758 -59387216 + (CTTG)n Simple_repeat Simple_repeat 1 34 0 1 921 269 371 62 11 chr15 44108078 44108255 -59386719 + MLT1L LTR MaLR 425 610 0 1 921 407 65 0 31 chr15 44108792 44108856 -59386118 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 1 921 1065 276 27 62 chr15 44108949 44109286 -59385688 - Lx8 LINE L1 -916 6557 6232 1 921 3860 112 37 3 chr15 44109286 44109851 -59385123 - MT2B2 LTR ERVL 0 584 1 1 921 1065 276 27 62 chr15 44109851 44109884 -59385090 - Lx8 LINE L1 -1242 6231 6200 1 921 1074 304 69 29 chr15 44109964 44110525 -59384449 + Lx8 LINE L1 6578 7187 -286 1 921 952 333 15 4 chr15 44110549 44110817 -59384157 + B4A SINE B4 22 292 0 1 921 239 233 10 62 chr15 44111836 44111932 -59383042 - L1MA10 LINE L1 -1 6333 6243 1 921 229 169 34 0 chr15 44111946 44112005 -59382969 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 921 532 301 180 62 chr15 44112050 44112294 -59382680 - B4 SINE B4 -12 280 8 1 921 231 397 54 20 chr15 44112801 44113004 -59381970 - MIRb SINE MIR -46 222 13 1 921 3952 27 0 0 chr15 44113608 44114089 -59380885 - L1Md_F2 LINE L1 -409 6173 5693 1 921 2843 35 60 0 chr15 44114091 44114439 -59380535 + L1Md_F2 LINE L1 6201 6569 -13 1 921 21 71 0 0 chr15 44115721 44115763 -59379211 + AT_rich Low_complexity Low_complexity 1 42 0 1 921 184 424 0 0 chr15 44115846 44115945 -59379029 - L2b LINE L2 -5 3370 3272 1 921 3278 224 97 55 chr15 44116574 44116799 -59378175 - RLTR25B LTR ERVK -5 1023 768 1 921 306 67 0 0 chr15 44116799 44116844 -59378130 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 921 3278 224 97 55 chr15 44116844 44117030 -59377944 - RLTR25B LTR ERVK -261 767 624 1 921 411 21 0 0 chr15 44117030 44117078 -59377896 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 921 3278 224 97 55 chr15 44117078 44117647 -59377327 - RLTR25B LTR ERVK -405 623 3 1 921 25 0 0 0 chr15 44118146 44118171 -59376803 + AT_rich Low_complexity Low_complexity 1 25 0 1 921 215 368 35 0 chr15 44118280 44118367 -59376607 - L2b LINE L2 -356 3019 2930 1 921 1263 278 77 8 chr15 44118518 44118881 -59376093 - MTD LTR MaLR -31 388 1 1 921 206 371 80 68 chr15 44119785 44119947 -59375027 - MER5A DNA MER1_type -12 177 14 1 921 241 312 76 46 chr15 44120780 44120911 -59374063 - MIRb SINE MIR -8 260 126 1 921 285 29 0 0 chr15 44121508 44121542 -59373432 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 921 242 227 39 78 chr15 44121858 44121987 -59372987 - RMER17D LTR ERVK -386 503 380 1 921 363 96 0 0 chr15 44122320 44122372 -59372602 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 921 7147 163 16 5 chr15 44123386 44124673 -59370301 - Lx2B LINE L1 -2 6998 5697 1 921 7765 146 27 26 chr15 44124670 44126146 -59368828 + Lx2B LINE L1 4241 5718 -159 1 921 6370 117 19 10 chr15 44126322 44127296 -59367678 - RLTR13C1 LTR ERVK 0 983 1 1 921 1757 192 0 0 chr15 44127305 44127639 -59367335 - ETnERV3-int LTR ERVK -28 5780 5447 1 921 4264 94 2 28 chr15 44127662 44128265 -59366709 - LTRIS_Mus LTR ERV1 0 587 1 1 921 23 33 0 0 chr15 44128302 44128332 -59366642 + AT_rich Low_complexity Low_complexity 1 30 0 1 921 1050 272 144 12 chr15 44128549 44128895 -59366079 - RLTR18B LTR ERVK -1 511 120 1 921 9882 89 3 5 chr15 44128895 44129905 -59365069 - L1VL1 LINE L1 -3159 2724 1720 1 921 4814 56 2 2 chr15 44129905 44130492 -59364482 + LTRIS_Mus LTR ERV1 1 587 0 1 921 9882 96 7 2 chr15 44130492 44131982 -59362992 - L1VL1 LINE L1 -4164 1719 218 1 921 261 0 0 0 chr15 44132149 44132178 -59362796 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 921 359 332 102 23 chr15 44132340 44132605 -59362369 + MER68 LTR ERVL 28 313 -250 1 921 198 232 113 28 chr15 44132676 44132747 -59362227 + L4 LINE RTE 1709 1785 -244 1 921 298 250 0 0 chr15 44133703 44133767 -59361207 - ID2 SINE ID -11 72 9 1 921 22 0 0 0 chr15 44134053 44134075 -59360899 + AT_rich Low_complexity Low_complexity 1 22 0 1 921 272 344 131 32 chr15 44135338 44135650 -59359324 + LTR80B LTR ERVL 75 417 -167 1 921 191 357 95 0 chr15 44135899 44136025 -59358949 - L2 LINE L2 -465 2954 2817 1 921 225 0 0 0 chr15 44136672 44136697 -59358277 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 921 185 0 40 0 chr15 44136878 44136903 -59358071 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 921 429 206 18 89 chr15 44136975 44137087 -59357887 + MT2B LTR ERVL 153 256 -345 1 921 1052 73 0 0 chr15 44136991 44137127 -59357847 + B1_Mus1 SINE Alu 7 142 -6 1 921 955 35 65 0 chr15 44137130 44137299 -59357675 + (GAA)n Simple_repeat Simple_repeat 1 180 0 1 921 25 31 0 0 chr15 44137431 44137463 -59357511 + AT_rich Low_complexity Low_complexity 1 32 0 1 921 492 255 87 75 chr15 44137463 44137624 -59357350 - RSINE1 SINE B4 0 165 3 1 921 351 0 0 0 chr15 44137675 44137714 -59357260 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 921 396 0 0 0 chr15 44139595 44139639 -59355335 + (GTATG)n Simple_repeat Simple_repeat 4 47 0 1 921 301 293 134 69 chr15 44139851 44140126 -59354848 - L1MC3 LINE L1 -827 6958 6666 1 921 1383 71 11 0 chr15 44140176 44140359 -59354615 - B2_Mm1t SINE B2 -8 185 1 1 921 200 341 11 43 chr15 44140364 44140456 -59354518 - L2a LINE L2 -1 3425 3337 1 921 37 93 0 0 chr15 44140457 44140564 -59354410 + AT_rich Low_complexity Low_complexity 1 107 0 1 921 656 283 105 45 chr15 44140597 44141015 -59353959 - L1MC3 LINE L1 -1208 6577 6135 1 921 1582 120 0 43 chr15 44141216 44141494 -59353480 + Lx4B LINE L1 5763 6028 -1030 1 921 3480 174 45 23 chr15 44141494 44141947 -59353027 + RLTR17 LTR ERVK 19 472 -220 1 921 4125 165 103 64 chr15 44141947 44142342 -59352632 + RMER13B LTR ERVK 1 397 -511 1 921 1145 51 0 0 chr15 44142342 44142480 -59352494 + B1_Mus1 SINE Alu 2 139 -9 1 921 4125 165 103 64 chr15 44142480 44142958 -59352016 + RMER13B LTR ERVK 398 908 0 1 921 3480 174 45 23 chr15 44142958 44143163 -59351811 + RLTR17 LTR ERVK 473 692 0 1 921 3684 183 56 32 chr15 44143163 44144143 -59350831 + Lx4B LINE L1 6023 6997 -3 1 921 252 59 0 0 chr15 44144541 44144575 -59350399 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 1 921 21 0 0 0 chr15 44144618 44144639 -59350335 + AT_rich Low_complexity Low_complexity 1 21 0 1 921 1275 287 112 24 chr15 44144663 44145209 -59349765 + Lx8 LINE L1 6878 7471 -2 1 921 32 67 0 0 chr15 44145209 44145269 -59349705 + AT_rich Low_complexity Low_complexity 1 60 0 1 921 255 231 15 0 chr15 44145385 44145450 -59349524 + (TATATG)n Simple_repeat Simple_repeat 5 70 0 1 921 18055 105 47 37 chr15 44145508 44149923 -59345051 + L1Md_F LINE L1 438 5581 -299 2 921 8994 7 0 0 chr15 44149923 44150919 -59344055 + L1Md_T LINE L1 5587 6582 0 2 921 980 46 69 0 chr15 44150935 44151066 -59343908 + L1Md_F2 LINE L1 5447 5586 -297 2 921 8196 44 1 2 chr15 44151067 44152063 -59342911 + L1Md_F2 LINE L1 5588 6582 0 2 921 1623 272 129 42 chr15 44152185 44152226 -59342748 + Charlie2a DNA MER1_type 956 1008 -1853 2 921 225 0 0 0 chr15 44152226 44152251 -59342723 + (TAA)n Simple_repeat Simple_repeat 3 27 0 2 921 1623 272 129 42 chr15 44152251 44153256 -59341718 + Charlie2a DNA MER1_type 1009 2093 -768 2 921 1025 237 171 173 chr15 44153347 44153816 -59341158 - MT2B LTR ERVL -2 599 6 2 921 347 152 34 0 chr15 44153834 44153893 -59341081 + RMER2 LTR ERV1 1 61 -506 2 921 737 256 108 92 chr15 44153904 44154239 -59340735 + RMER2 LTR ERV1 213 552 -15 2 921 971 273 20 0 chr15 44154342 44154540 -59340434 - B3 SINE B2 -6 210 9 2 921 1633 226 73 24 chr15 44155695 44155810 -59339164 - Lx9 LINE L1 -6 7638 7516 2 921 246 62 0 0 chr15 44155810 44155842 -59339132 + (TTATA)n Simple_repeat Simple_repeat 3 34 0 2 921 252 86 0 0 chr15 44155850 44155885 -59339089 + (CATA)n Simple_repeat Simple_repeat 2 36 0 2 921 1633 226 73 24 chr15 44155885 44156255 -59338719 - Lx9 LINE L1 -144 7500 7122 2 921 352 269 9 9 chr15 44156260 44156365 -59338609 + Lx9 LINE L1 6946 7050 -594 2 921 289 308 43 43 chr15 44156402 44156754 -59338220 + MuLV-int LTR ERV1 2440 2821 -4735 2 921 1607 321 141 47 chr15 44156793 44158704 -59336270 + MuLV-int LTR ERV1 3221 5310 -2296 2 921 677 287 51 6 chr15 44158886 44159044 -59335930 - B3A SINE B2 -33 165 1 2 921 2294 125 57 5 chr15 44159070 44159471 -59335503 - BGLII_Mus LTR ERVK 0 422 1 2 921 264 205 60 12 chr15 44159601 44159685 -59335289 - L1MC LINE L1 -873 5273 5186 2 921 1264 124 0 5 chr15 44159698 44159885 -59335089 + B2_Mm2 SINE B2 2 187 -8 2 921 3513 107 23 37 chr15 44160188 44160760 -59334214 + LTRIS2 LTR ERV1 1 564 0 2 921 758 302 103 34 chr15 44162710 44163146 -59331828 - MER90a LTR ERV1 -1 613 148 2 921 359 325 75 51 chr15 44163224 44163438 -59331536 + MER102b DNA MER1_type 1 219 -122 2 921 401 319 29 29 chr15 44164482 44164621 -59330353 - MIR SINE MIR 0 262 124 2 921 188 143 20 0 chr15 44164755 44164791 -59330183 + (CAGAGA)n Simple_repeat Simple_repeat 3 39 0 2 921 393 39 0 0 chr15 44164791 44164842 -59330132 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 2 921 188 143 20 0 chr15 44164842 44164854 -59330120 + (CAGAGA)n Simple_repeat Simple_repeat 4 15 0 2 921 231 159 47 16 chr15 44165796 44165860 -59329114 + (TA)n Simple_repeat Simple_repeat 1 66 0 2 921 554 242 39 0 chr15 44165860 44165988 -59328986 + MER54B LTR ERVL 27 159 -634 2 921 855 153 0 0 chr15 44166104 44166254 -59328720 + GA-rich Low_complexity Low_complexity 3 152 0 2 921 273 155 0 53 chr15 44166276 44166351 -59328623 + CT-rich Low_complexity Low_complexity 1 71 0 2 921 562 183 17 0 chr15 44166352 44166472 -59328502 + Lx5 LINE L1 5334 5455 -422 2 921 1064 202 43 4 chr15 44166470 44166728 -59328246 + Lx5 LINE L1 5769 6036 -1014 2 921 693 309 58 5 chr15 44167349 44167573 -59327401 + B4A SINE B4 1 236 -56 2 921 240 255 90 9 chr15 44168253 44168364 -59326610 - L1MC4a LINE L1 -328 7554 7435 2 921 393 232 111 20 chr15 44168374 44168572 -59326402 - L1MC4a LINE L1 -744 7138 6923 2 921 316 348 8 17 chr15 44168682 44168799 -59326175 - L1MC4a LINE L1 -966 6916 6801 2 921 225 151 0 0 chr15 44168975 44169028 -59325946 + CT-rich Low_complexity Low_complexity 2 54 0 2 921 1167 195 33 68 chr15 44169197 44169517 -59325457 - Lx7 LINE L1 -16 7680 7372 2 921 606 28 0 0 chr15 44169517 44169589 -59325385 + (GA)n Simple_repeat Simple_repeat 1 72 0 2 921 1167 195 33 68 chr15 44169589 44169604 -59325370 - Lx7 LINE L1 -325 7371 7357 2 921 5953 40 3 0 chr15 44169629 44170348 -59324626 - L1Md_F3 LINE L1 -14 6570 5850 2 921 2423 214 30 16 chr15 44170363 44170489 -59324485 - Lx7 LINE L1 -328 7368 7249 2 115 6946 52 46 0 chr15 44170489 44171343 -59323631 - RLTR13B1 LTR ERVK 0 893 1 2 922 2423 214 30 16 chr15 44171343 44171773 -59323201 - Lx7 LINE L1 -448 7248 6804 2 922 340 292 189 14 chr15 44172114 44172336 -59322638 - L1MEf LINE L1 -4860 1340 1080 2 922 287 209 30 0 chr15 44172390 44172457 -59322517 + L1MB8 LINE L1 5822 5890 -288 2 922 339 173 55 0 chr15 44174234 44174344 -59320630 + (TA)n Simple_repeat Simple_repeat 1 116 0 2 922 435 68 0 0 chr15 44174344 44174403 -59320571 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 922 984 67 97 0 chr15 44174686 44174820 -59320154 + B1_Mus2 SINE Alu 1 147 0 2 922 551 369 96 54 chr15 44175103 44175657 -59319317 + MLT1G LTR MaLR 48 579 -12 2 922 257 350 62 19 chr15 44175733 44175893 -59319081 - Helitron3Na_Mam RC Helitron -229 257 91 2 922 436 211 10 31 chr15 44175915 44176013 -59318961 - BC1_Mm scRNA scRNA -55 97 2 2 922 2427 231 80 109 chr15 44177539 44179052 -59315922 + RMER1B Other Other 1 1052 -14 2 922 369 0 0 0 chr15 44179058 44179099 -59315875 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 922 1107 76 7 0 chr15 44179206 44179351 -59315623 - B1_Mm SINE Alu 0 147 2 2 922 683 214 9 97 chr15 44179430 44179464 -59315510 - RMER17B LTR ERVK -187 223 189 2 922 489 34 0 0 chr15 44179464 44179523 -59315451 + (GAGAA)n Simple_repeat Simple_repeat 4 62 0 2 922 848 164 43 35 chr15 44179523 44179768 -59315206 - RMER17B LTR ERVK -572 386 1 2 922 25 0 0 0 chr15 44180254 44180279 -59314695 + AT_rich Low_complexity Low_complexity 1 25 0 2 922 317 277 76 79 chr15 44180770 44181120 -59313854 + MER31B LTR ERV1 2 415 -51 2 922 25 51 0 0 chr15 44181149 44181188 -59313786 + AT_rich Low_complexity Low_complexity 1 39 0 2 922 4487 156 127 57 chr15 44181212 44181409 -59313565 - RLTR25A LTR ERVK -5 1098 860 2 922 480 62 0 0 chr15 44181409 44181473 -59313501 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 922 4487 156 127 57 chr15 44181473 44182177 -59312797 - RLTR25A LTR ERVK -244 859 128 2 922 2484 75 203 18 chr15 44182177 44182626 -59312348 - RLTR47_MM LTR ERV1 0 532 1 2 922 4487 156 127 57 chr15 44182626 44182750 -59312224 - RLTR25A LTR ERVK -976 127 1 2 922 236 208 10 59 chr15 44182816 44182918 -59312056 + A-rich Low_complexity Low_complexity 3 99 0 2 922 6553 239 36 20 chr15 44183145 44184580 -59310394 - Lx6 LINE L1 -169 7291 5837 2 922 191 125 0 24 chr15 44184580 44184621 -59310353 + (ATG)n Simple_repeat Simple_repeat 1 40 0 2 922 6553 170 34 6 chr15 44184621 44185704 -59309270 - Lx6 LINE L1 -1624 5836 4728 2 922 5624 74 93 1 chr15 44185712 44186540 -59308434 - L1_Mus3 LINE L1 -7 6631 5728 2 922 1473 155 57 16 chr15 44186526 44186840 -59308134 - Lx6 LINE L1 -1123 4757 4431 2 922 3518 184 3 11 chr15 44186854 44187509 -59307465 - Lx5 LINE L1 -141 6909 6260 2 922 794 279 27 8 chr15 44187516 44187773 -59307201 + Lx5 LINE L1 6022 6283 -767 2 922 776 89 177 0 chr15 44187770 44187928 -59307046 - L1_Mur3 LINE L1 -1447 4433 4248 2 922 1879 132 91 12 chr15 44187928 44188257 -59306717 - ORR1B2 LTR MaLR -10 357 3 2 922 1242 137 5 0 chr15 44188261 44188480 -59306494 - L1_Mur3 LINE L1 -2800 3080 2861 2 922 1601 172 37 58 chr15 44188480 44188913 -59306061 - L1_Mur3 LINE L1 -3645 2235 1812 2 922 441 0 0 0 chr15 44188913 44188962 -59306012 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 922 639 48 0 0 chr15 44188962 44189044 -59305930 + (TG)n Simple_repeat Simple_repeat 2 84 0 2 922 1065 172 34 0 chr15 44189054 44189258 -59305716 - L1_Mur3 LINE L1 -6539 1189 979 2 922 248 199 148 11 chr15 44189310 44189404 -59305570 - RMER21B LTR ERV1 -258 689 520 2 922 3154 223 113 14 chr15 44189585 44190780 -59304194 - L1_Mur3 LINE L1 -6747 981 19 2 922 3215 93 4 37 chr15 44190780 44191271 -59303703 - IAPLTR2_Mm LTR ERVK 0 475 1 2 922 1599 223 132 21 chr15 44191271 44191561 -59303413 - L1_Mur3 LINE L1 -7351 377 59 2 922 718 28 46 0 chr15 44193703 44193812 -59301162 + (TA)n Simple_repeat Simple_repeat 2 115 0 2 922 737 308 61 9 chr15 44195374 44195603 -59299371 + ORR1E LTR MaLR 3 243 -116 2 922 1973 235 108 33 chr15 44196135 44197414 -59297560 + RMER1B Other Other 3 1063 -3 2 922 398 316 44 71 chr15 44197449 44197595 -59297379 - MLT1D LTR MaLR -32 473 340 2 922 873 0 0 0 chr15 44197595 44197692 -59297282 + (TTTC)n Simple_repeat Simple_repeat 3 99 0 2 922 398 316 44 71 chr15 44197692 44197797 -59297177 - MLT1D LTR MaLR -166 339 230 2 922 21 36 0 0 chr15 44198528 44198556 -59296418 + AT_rich Low_complexity Low_complexity 1 28 0 2 922 565 139 9 9 chr15 44198795 44198848 -59296126 + polypurine Low_complexity Low_complexity 4 57 0 2 922 3716 57 116 6 chr15 44198848 44199356 -59295618 - LTRIS2 LTR ERV1 0 564 1 2 922 565 139 9 9 chr15 44199356 44199411 -59295563 + polypurine Low_complexity Low_complexity 58 112 0 2 922 581 314 47 40 chr15 44199436 44199735 -59295239 + Lx8 LINE L1 7153 7453 -20 2 922 24 0 0 0 chr15 44200878 44200902 -59294072 + AT_rich Low_complexity Low_complexity 1 24 0 2 922 269 338 14 0 chr15 44200922 44200993 -59293981 - ID2 SINE ID 0 83 12 2 922 742 296 107 46 chr15 44201208 44201555 -59293419 + MTEa LTR MaLR 12 379 0 2 922 544 253 138 53 chr15 44201554 44201742 -59293232 + MTEa-int LTR MaLR 2 205 -1375 2 922 251 288 128 29 chr15 44201778 44201950 -59293024 - MT2A LTR ERVL -2 531 343 2 922 448 308 137 68 chr15 44201947 44202268 -59292706 - MT2A LTR ERVL -101 432 90 2 922 231 154 18 88 chr15 44202281 44202338 -59292636 - MTE2a LTR MaLR -326 53 1 2 922 469 306 28 7 chr15 44202346 44202491 -59292483 + MTEa-int LTR MaLR 303 450 -1130 2 922 536 183 115 0 chr15 44203262 44203366 -59291608 - B1_Mus1 SINE Alu -28 120 5 2 922 799 133 274 23 chr15 44203447 44203662 -59291312 + Lx2 LINE L1 6727 6995 -2 2 922 299 327 103 54 chr15 44204014 44204237 -59290737 + MLT1K LTR MaLR 356 589 -6 2 922 282 95 0 0 chr15 44204246 44204288 -59290686 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 922 352 123 27 0 chr15 44204359 44204432 -59290542 + (TA)n Simple_repeat Simple_repeat 1 75 0 2 922 6405 34 27 1 chr15 44205015 44205786 -59289188 + L1Md_T LINE L1 5792 6582 0 2 922 281 197 80 11 chr15 44206115 44206217 -59288757 + B1F SINE Alu 1 142 -7 2 922 298 162 13 13 chr15 44206313 44206388 -59288586 + (TA)n Simple_repeat Simple_repeat 2 76 0 2 922 650 280 70 101 chr15 44206407 44206705 -59288269 - B4A SINE B4 -2 290 2 2 922 432 230 35 0 chr15 44207247 44207334 -59287640 - PB1D10 SINE Alu 0 117 28 2 922 626 272 73 40 chr15 44208571 44208969 -59286005 + L1MA4A LINE L1 4395 4805 -1338 2 922 294 271 11 56 chr15 44208985 44209075 -59285899 + URR1B DNA MER1_type 7 92 -133 2 922 535 303 108 10 chr15 44209148 44209998 -59284976 + L1MA4A LINE L1 4977 5926 -377 2 922 200 100 25 0 chr15 44210015 44210055 -59284919 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 922 254 304 16 57 chr15 44210912 44211034 -59283940 - PB1D10 SINE Alu 0 117 1 2 922 240 326 21 21 chr15 44211034 44211068 -59283906 - ID SINE ID -142 82 49 2 922 1172 68 0 0 chr15 44211204 44211350 -59283624 + B1_Mus2 SINE Alu 2 147 0 2 922 241 289 108 0 chr15 44211879 44211962 -59283012 - B1F SINE Alu -57 92 1 2 922 756 314 97 47 chr15 44213697 44214058 -59280916 + MLT1D LTR MaLR 10 388 -117 2 922 182 292 9 111 chr15 44214215 44214323 -59280651 - MIR SINE MIR -82 180 84 3 922 2866 128 241 122 chr15 44214701 44215511 -59279463 - RMER17A2 LTR ERVK 0 906 1 3 922 2709 44 0 3 chr15 44215776 44216115 -59278859 - ORR1A1 LTR MaLR -8 338 1 3 922 632 335 72 58 chr15 44216361 44216709 -59278265 - MTEa LTR MaLR -17 362 10 3 922 198 0 0 0 chr15 44217187 44217209 -59277765 + (A)n Simple_repeat Simple_repeat 1 22 0 3 922 337 361 62 22 chr15 44217219 44217491 -59277483 + Tigger15a DNA TcMar 307 589 -126 3 922 198 286 0 0 chr15 44218791 44218833 -59276141 + MIRm SINE MIR 17 58 -218 3 922 217 212 0 57 chr15 44218892 44218962 -59276012 + A-rich Low_complexity Low_complexity 1 66 0 3 922 403 345 19 85 chr15 44219453 44219665 -59275309 + B3A SINE B2 6 203 -13 3 922 385 306 103 15 chr15 44220252 44220388 -59274586 + B1F SINE Alu 1 148 -1 3 922 186 71 0 0 chr15 44220527 44220555 -59274419 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 922 246 292 111 31 chr15 44220636 44220961 -59274013 + L1MEg LINE L1 1157 1507 -4577 3 922 324 102 0 0 chr15 44221210 44221259 -59273715 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 922 23664 120 10 21 chr15 44221488 44225962 -59269012 + L1Md_F LINE L1 390 4786 -1097 3 922 3050 81 2 0 chr15 44225963 44226369 -59268605 + L1_Mus2 LINE L1 6158 6564 -2 3 922 180 0 0 0 chr15 44226905 44226925 -59268049 + (A)n Simple_repeat Simple_repeat 1 20 0 3 922 297 238 0 77 chr15 44227614 44227705 -59267269 - L1M2 LINE L1 -637 5654 5571 3 922 229 292 26 53 chr15 44227689 44227765 -59267209 + Lx9 LINE L1 5637 5710 -1934 3 922 309 353 43 5 chr15 44229485 44229670 -59265304 - MIR SINE MIR 0 262 71 3 922 210 260 20 0 chr15 44229861 44229911 -59265063 - ID SINE ID -173 51 1 3 922 954 38 15 8 chr15 44230003 44230135 -59264839 + (TCTA)n Simple_repeat Simple_repeat 4 136 0 3 922 1385 179 31 7 chr15 44230135 44230422 -59264552 - L1_Mur2 LINE L1 -1147 4730 4437 3 922 554 300 19 32 chr15 44230475 44230630 -59264344 - ID_B1 SINE B4 -7 217 65 3 922 251 197 32 16 chr15 44231005 44231067 -59263907 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 3 922 369 0 0 0 chr15 44232087 44232128 -59262846 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 922 248 299 70 0 chr15 44232303 44232378 -59262596 - ID4_ SINE ID -63 89 13 3 922 404 239 74 33 chr15 44233098 44233219 -59261755 + RSINE1 SINE B4 12 137 -28 3 922 447 238 135 0 chr15 44233288 44233414 -59261560 - MER3 DNA MER1_type -1 208 66 3 922 1387 287 57 9 chr15 44233671 44234128 -59260846 + Lx7 LINE L1 6818 7296 -400 3 922 258 175 0 31 chr15 44234193 44234258 -59260716 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 3 922 41 21 0 0 chr15 44234343 44234391 -59260583 + AT_rich Low_complexity Low_complexity 1 48 0 3 922 1113 241 30 4 chr15 44234641 44234908 -59260066 + B4 SINE B4 2 275 -17 3 922 207 0 0 0 chr15 44234925 44234948 -59260026 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 922 287 313 193 0 chr15 44235408 44235558 -59259416 + Cheshire DNA MER1_type 102 280 -2140 3 922 268 279 62 54 chr15 44236224 44236353 -59258621 + RMER15 LTR ERVL 1 130 -445 3 922 315 318 119 6 chr15 44236400 44236577 -59258397 + RMER15 LTR ERVL 311 507 -68 3 922 507 321 208 30 chr15 44237619 44238064 -59256910 + MLT1F1 LTR MaLR 38 560 0 3 922 755 191 92 0 chr15 44238121 44238273 -59256701 - URR1B DNA MER1_type -59 166 1 3 922 318 316 117 37 chr15 44238524 44238797 -59256177 - Tigger13a DNA MER2_type -474 297 3 3 922 239 208 57 0 chr15 44239120 44239173 -59255801 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 3 922 22 94 0 0 chr15 44239376 44239440 -59255534 + AT_rich Low_complexity Low_complexity 1 64 0 3 922 376 285 260 45 chr15 44239520 44239994 -59254980 + MER90 LTR ERV1 1 575 0 3 922 354 98 0 0 chr15 44242644 44242695 -59252279 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 3 922 559 282 179 4 chr15 44244533 44244876 -59250098 + L1MA9 LINE L1 5485 5909 -403 3 922 5304 224 68 28 chr15 44246028 44247331 -59247643 - Lx6 LINE L1 -347 7113 5748 3 922 9172 159 73 55 chr15 44247330 44247461 -59247513 - Lx6 LINE L1 -528 5352 5221 3 922 1974 167 77 69 chr15 44247461 44247879 -59247095 - MTC LTR MaLR 0 421 1 3 922 9172 159 73 55 chr15 44247879 44248411 -59246563 - Lx6 LINE L1 -660 5220 4629 3 922 648 59 0 0 chr15 44248411 44248496 -59246478 + (TG)n Simple_repeat Simple_repeat 2 86 0 3 922 9172 159 73 55 chr15 44248496 44249200 -59245774 - Lx6 LINE L1 -1252 4628 3930 3 922 1146 37 0 0 chr15 44249200 44249336 -59245638 - B1_Mus2 SINE Alu -10 137 2 3 922 9172 159 73 55 chr15 44249336 44249646 -59245328 - Lx6 LINE L1 -1951 3929 3611 3 922 1767 139 17 64 chr15 44249646 44249991 -59244983 + ORR1A4 LTR MaLR 1 329 0 3 922 9172 159 73 55 chr15 44249991 44250370 -59244604 - Lx6 LINE L1 -2270 3610 3256 3 922 423 56 0 0 chr15 44250370 44250424 -59244550 + (TTTTC)n Simple_repeat Simple_repeat 1 54 0 3 922 3938 96 32 2 chr15 44250426 44250991 -59243983 - L1_Mus3 LINE L1 -1 6637 6056 3 922 1178 154 17 138 chr15 44251044 44251398 -59243576 + L1_Mur3 LINE L1 2909 3219 -2661 3 922 395 324 0 0 chr15 44251577 44251682 -59243292 - B4 SINE B4 -142 150 46 3 922 423 112 175 0 chr15 44251683 44251763 -59243211 + L1_Mur3 LINE L1 3498 3591 -2289 3 922 24 53 0 0 chr15 44251821 44251859 -59243115 + AT_rich Low_complexity Low_complexity 1 38 0 3 922 242 236 0 0 chr15 44252426 44252481 -59242493 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 922 1230 265 96 19 chr15 44253127 44253493 -59241481 - MTD LTR MaLR -14 405 12 3 922 585 271 85 0 chr15 44253527 44253726 -59241248 - B3 SINE B2 0 216 1 3 922 506 204 146 0 chr15 44253892 44253995 -59240979 + PB1D9 SINE Alu 2 119 -1 3 922 27 49 0 0 chr15 44254050 44254091 -59240883 + AT_rich Low_complexity Low_complexity 1 41 0 3 922 384 59 0 0 chr15 44254218 44254269 -59240705 + (A)n Simple_repeat Simple_repeat 1 51 0 3 922 832 219 74 141 chr15 44254301 44254705 -59240269 - MTE2a LTR MaLR -1 378 2 3 922 189 329 42 49 chr15 44254806 44254950 -59240024 + L3 LINE CR1 3093 3235 -1254 3 922 944 304 74 15 chr15 44255375 44255832 -59239142 + L1M2 LINE L1 4474 4957 -1186 3 922 1138 254 65 98 chr15 44255842 44256395 -59238579 + RLTR12B LTR ERVK 12 561 -7 3 922 847 269 214 41 chr15 44256404 44257114 -59237860 + L1_Mur3 LINE L1 4982 5814 -66 3 922 344 261 27 127 chr15 44257120 44257158 -59237816 + MTE2b LTR MaLR 10 47 -332 3 922 1276 75 15 61 chr15 44257158 44257356 -59237618 - B2_Mm1a SINE B2 -4 189 1 3 922 344 261 27 127 chr15 44257356 44257427 -59237547 + MTE2b LTR MaLR 48 108 -271 3 922 228 361 112 24 chr15 44257747 44257872 -59237102 + MLT1H LTR MaLR 253 388 -161 3 922 243 0 0 0 chr15 44258323 44258350 -59236624 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 922 476 181 96 0 chr15 44258380 44258474 -59236500 + B1_Mur3 SINE Alu 19 121 -28 3 922 330 270 69 49 chr15 44258474 44258520 -59236454 + MT2B2 LTR ERVL 183 325 -259 3 922 207 0 0 0 chr15 44259878 44259901 -59235073 + (CTCG)n Simple_repeat Simple_repeat 4 26 0 3 922 359 228 116 0 chr15 44260024 44260160 -59234814 - MIR3 SINE MIR -15 193 43 3 922 255 135 0 37 chr15 44260729 44260795 -59234179 + MIR SINE MIR 84 143 -65 3 922 686 283 88 44 chr15 44262071 44262322 -59232652 - MLT1K LTR MaLR -48 547 286 3 922 263 288 213 33 chr15 44262773 44262956 -59232018 - L2a LINE L2 -18 3408 3193 3 922 181 340 169 41 chr15 44263193 44263435 -59231539 - L2a LINE L2 -661 2758 2486 3 922 939 28 0 0 chr15 44264140 44264247 -59230727 + U6 snRNA snRNA 1 107 0 3 922 1383 76 16 0 chr15 44266510 44266694 -59228280 + B2_Mm2 SINE B2 3 189 -6 3 922 1144 64 19 0 chr15 44266800 44266957 -59228017 - L1Md_T LINE L1 0 6582 6423 3 922 703 209 10 16 chr15 44269515 44269667 -59225307 - ID_B1 SINE B4 -51 241 92 3 922 438 20 0 0 chr15 44270128 44270179 -59224795 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 922 301 256 39 0 chr15 44271203 44271281 -59223693 - ID4 SINE ID -1 82 2 3 922 1371 62 0 0 chr15 44271907 44272085 -59222889 + (TCTCCC)n Simple_repeat Simple_repeat 3 180 0 3 922 338 269 155 9 chr15 44272773 44272889 -59222085 - ORR1E LTR MaLR -226 133 1 3 922 1059 241 134 11 chr15 44272902 44273275 -59221699 + MTD LTR MaLR 1 419 0 3 922 670 274 25 78 chr15 44273276 44273518 -59221456 + MTD-int LTR MaLR 2 230 -1028 3 922 22072 135 30 37 chr15 44273537 44276394 -59218580 + L1_Mus3 LINE L1 609 3454 -2429 3 922 4893 58 22 3 chr15 44276394 44277034 -59217940 + L1Md_F2 LINE L1 5931 6582 0 3 922 22072 112 34 23 chr15 44277034 44277285 -59217689 + L1_Mus3 LINE L1 3455 3658 -2225 3 922 1088 69 0 33 chr15 44277285 44277435 -59217539 + B1_Mus2 SINE Alu 1 145 -2 3 922 22072 102 21 13 chr15 44277435 44280388 -59214586 + L1_Mus3 LINE L1 3659 6633 -5 3 922 1350 280 35 84 chr15 44280398 44281235 -59213739 + MTD-int LTR MaLR 238 1538 -425 3 922 1033 110 0 14 chr15 44281239 44281387 -59213587 - B1_Mus1 SINE Alu -1 147 2 3 922 1231 265 167 0 chr15 44281411 44281758 -59213216 + MTD LTR MaLR 15 419 0 3 922 376 306 51 0 chr15 44282375 44282571 -59212403 + L1MA8 LINE L1 5380 5585 -727 3 922 239 333 0 0 chr15 44282584 44282647 -59212327 + B1F2 SINE Alu 21 83 -66 3 922 381 235 12 0 chr15 44282676 44282761 -59212213 + L1MA8 LINE L1 5574 5659 -509 3 922 349 292 127 45 chr15 44282779 44283023 -59211951 + L1MA8 LINE L1 5731 5994 -297 3 922 1815 262 137 37 chr15 44283285 44284085 -59210889 - Lx6 LINE L1 -26 7434 6555 3 922 648 294 25 17 chr15 44284169 44284408 -59210566 - Lx8 LINE L1 -228 7245 7005 3 922 2569 209 88 49 chr15 44284408 44285036 -59209938 + RLTR21 LTR ERVK 1 652 -920 3 922 503 249 73 44 chr15 44285073 44285251 -59209723 + RLTR21 LTR ERVK 1282 1433 -139 3 922 273 272 86 0 chr15 44285253 44285334 -59209640 - Lx8 LINE L1 -465 7008 6921 3 922 1367 220 10 110 chr15 44285348 44285747 -59209227 - RMER19B LTR ERVK 0 902 544 3 922 1155 323 14 0 chr15 44285759 44286124 -59208850 - Lx8 LINE L1 -561 6912 6543 3 922 713 321 7 3 chr15 44286188 44286472 -59208502 - L1M2 LINE L1 -1089 5054 4770 3 922 206 259 35 0 chr15 44287020 44287078 -59207896 + (CATA)n Simple_repeat Simple_repeat 4 63 0 3 922 560 299 7 33 chr15 44287207 44287359 -59207615 + RSINE1 SINE B4 3 150 -15 3 922 308 227 0 29 chr15 44287510 44287578 -59207396 + PB1D10 SINE Alu 43 108 -9 3 922 498 33 0 0 chr15 44287611 44287671 -59207303 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 922 495 0 0 0 chr15 44288798 44288853 -59206121 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 922 473 58 14 0 chr15 44288853 44288921 -59206053 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 922 205 200 133 0 chr15 44289957 44290017 -59204957 - L3b LINE CR1 -385 97 30 4 922 213 203 34 0 chr15 44291278 44291337 -59203637 + (TTAAA)n Simple_repeat Simple_repeat 5 65 0 4 922 315 0 0 0 chr15 44292222 44292257 -59202717 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 922 226 304 47 91 chr15 44292666 44292941 -59202033 + L1MA10 LINE L1 5949 6211 -123 4 922 24 32 0 0 chr15 44293118 44293149 -59201825 + AT_rich Low_complexity Low_complexity 1 31 0 4 922 274 257 0 51 chr15 44293313 44293391 -59201583 + ID4_ SINE ID 2 75 -8 4 922 1043 246 5 9 chr15 44294725 44294942 -59200032 - B3 SINE B2 0 216 1 4 922 204 125 0 0 chr15 44295370 44295402 -59199572 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 4 922 29 47 0 0 chr15 44296287 44296330 -59198644 + AT_rich Low_complexity Low_complexity 1 43 0 4 922 250 328 35 9 chr15 44297119 44297233 -59197741 + PB1D10 SINE Alu 1 117 0 4 922 369 93 0 0 chr15 44297233 44297287 -59197687 + (GAAAA)n Simple_repeat Simple_repeat 1 54 0 4 922 1258 117 0 5 chr15 44299191 44299380 -59195594 - B2_Mm2 SINE B2 -6 189 2 4 922 24 32 0 0 chr15 44299402 44299433 -59195541 + AT_rich Low_complexity Low_complexity 1 31 0 4 922 641 287 56 84 chr15 44300180 44300465 -59194509 - MLT1D LTR MaLR -14 491 215 4 115 41135 8 0 1 chr15 44300677 44307881 -59187093 - L1Md_A LINE L1 0 6582 1 4 923 4936 108 57 25 chr15 44308131 44308939 -59186035 - Lx LINE L1 -12 6642 5809 4 923 210 37 0 0 chr15 44308996 44309023 -59185951 + (TA)n Simple_repeat Simple_repeat 1 27 0 4 923 215 321 0 0 chr15 44309453 44309509 -59185465 + B1F1 SINE Alu 2 57 -92 4 923 22 0 0 0 chr15 44309530 44309552 -59185422 + AT_rich Low_complexity Low_complexity 1 22 0 4 923 420 304 7 15 chr15 44309662 44309799 -59185175 - B1F1 SINE Alu -8 141 6 4 923 254 274 16 0 chr15 44309745 44309807 -59185167 - B4A SINE B4 -148 144 82 4 923 203 175 0 0 chr15 44309935 44309975 -59184999 + T-rich Low_complexity Low_complexity 1 40 0 4 923 1141 75 7 0 chr15 44309977 44310123 -59184851 - B1_Mm SINE Alu 0 147 1 4 923 24 67 0 0 chr15 44310237 44310282 -59184692 + AT_rich Low_complexity Low_complexity 1 45 0 4 923 3771 78 2 2 chr15 44310396 44310895 -59184079 + L1_Mus1 LINE L1 6065 6563 -4 4 923 6618 128 26 19 chr15 44311606 44312711 -59182263 - Lx2A1 LINE L1 0 7008 5896 4 923 267 54 0 0 chr15 44313124 44313161 -59181813 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 923 533 298 23 0 chr15 44313466 44313597 -59181377 + RSINE1 SINE B4 3 136 -29 4 923 23 54 0 0 chr15 44313656 44313693 -59181281 + AT_rich Low_complexity Low_complexity 1 37 0 4 923 217 196 69 35 chr15 44313760 44313818 -59181156 - L3b LINE CR1 0 482 423 4 923 252 77 0 0 chr15 44314573 44314612 -59180362 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 4 923 356 201 164 0 chr15 44314638 44314772 -59180202 + Lx9 LINE L1 7489 7644 0 4 923 249 263 26 13 chr15 44315164 44315241 -59179733 + L2b LINE L2 3296 3373 -2 4 923 282 56 0 0 chr15 44316107 44316143 -59178831 + (TCC)n Simple_repeat Simple_repeat 2 37 0 4 923 1315 109 0 20 chr15 44317372 44317569 -59177405 + B2_Mm2 SINE B2 2 194 -1 4 923 483 302 0 0 chr15 44319102 44319198 -59175776 + PB1D7 SINE Alu 17 112 -8 4 923 534 287 7 7 chr15 44319316 44319453 -59175521 + B1F1 SINE Alu 9 145 -4 4 923 237 346 67 0 chr15 44320500 44320604 -59174370 + MIRb SINE MIR 28 138 -130 4 923 362 173 0 13 chr15 44321920 44321996 -59172978 + (TA)n Simple_repeat Simple_repeat 1 75 0 4 923 437 287 9 0 chr15 44322053 44322168 -59172806 + B1F SINE Alu 16 131 -18 4 923 701 92 0 16 chr15 44323890 44324011 -59170963 + (TTTTC)n Simple_repeat Simple_repeat 2 120 0 4 923 1003 59 66 0 chr15 44324039 44324175 -59170799 - B1_Mm SINE Alu 0 147 3 4 923 891 274 29 0 chr15 44324300 44324508 -59170466 + B3 SINE B2 2 215 -1 4 923 1647 61 19 0 chr15 44324808 44325020 -59169954 + L1_Mus1 LINE L1 6352 6567 0 4 923 210 189 0 0 chr15 44325104 44325141 -59169833 - B4A SINE B4 -255 37 1 4 923 1198 206 106 0 chr15 44325322 44325643 -59169331 + Lx9 LINE L1 7290 7644 0 4 923 1165 206 18 54 chr15 44327248 44327525 -59167449 - Lx5 LINE L1 -693 6357 6091 4 923 2759 197 63 20 chr15 44328125 44328216 -59166758 - RLTR20B3 LTR ERVK 0 577 483 4 923 396 0 0 0 chr15 44328216 44328260 -59166714 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 923 2759 197 63 20 chr15 44328260 44328721 -59166253 - RLTR20B3 LTR ERVK -95 482 2 4 923 393 102 0 0 chr15 44328747 44328806 -59166168 + (TTA)n Simple_repeat Simple_repeat 2 60 0 4 923 462 65 0 0 chr15 44328807 44328869 -59166105 - B1_Mm SINE Alu -2 145 84 4 923 317 384 53 53 chr15 44328909 44329154 -59165820 - ORR1E LTR MaLR -108 251 7 4 923 23 33 0 0 chr15 44329359 44329389 -59165585 + AT_rich Low_complexity Low_complexity 1 30 0 4 923 222 289 0 0 chr15 44329695 44329740 -59165234 + ID4_ SINE ID 25 69 -14 4 923 25 31 0 0 chr15 44330504 44330536 -59164438 + AT_rich Low_complexity Low_complexity 1 32 0 4 923 21 36 0 0 chr15 44332219 44332247 -59162727 + AT_rich Low_complexity Low_complexity 1 28 0 4 923 29 47 0 0 chr15 44333498 44333541 -59161433 + AT_rich Low_complexity Low_complexity 1 43 0 4 923 301 323 188 16 chr15 44333630 44333822 -59161152 + B4A SINE B4 6 230 -62 4 923 24 32 0 0 chr15 44334426 44334457 -59160517 + AT_rich Low_complexity Low_complexity 1 31 0 4 923 195 129 0 0 chr15 44335086 44335117 -59159857 + (GGGA)n Simple_repeat Simple_repeat 3 33 0 4 923 25 51 0 0 chr15 44335160 44335199 -59159775 + AT_rich Low_complexity Low_complexity 1 39 0 4 923 209 200 0 0 chr15 44335640 44335675 -59159299 + (TATATG)n Simple_repeat Simple_repeat 6 40 0 4 923 1117 252 33 15 chr15 44335700 44336030 -59158944 + L1_Mur3 LINE L1 3753 4088 -1792 4 923 646 349 36 0 chr15 44336268 44336543 -59158431 - B4A SINE B4 -5 287 3 4 923 252 0 0 0 chr15 44336575 44336603 -59158371 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 923 522 0 0 0 chr15 44336603 44336660 -59158314 + (GA)n Simple_repeat Simple_repeat 1 58 0 4 923 559 294 0 56 chr15 44337435 44337597 -59157377 + RSINE1 SINE B4 11 163 -2 4 923 373 218 64 0 chr15 44337728 44337806 -59157168 - B3 SINE B2 -12 204 122 4 923 613 200 30 29 chr15 44337806 44337965 -59157009 - Lx4A LINE L1 -901 6157 5996 4 923 14569 129 31 6 chr15 44338084 44340629 -59154345 - Lx4A LINE L1 -1012 6046 3425 4 923 5616 97 113 2 chr15 44340654 44341520 -59153454 - Lx3_Mus LINE L1 0 7009 6048 4 923 2240 60 10 0 chr15 44341520 44341820 -59153154 + L1_Mur1 LINE L1 3601 3903 -1983 4 923 369 261 48 34 chr15 44341919 44342119 -59152855 - Lx6 LINE L1 -1495 5965 5841 4 923 273 341 112 8 chr15 44342183 44342443 -59152531 - L1ME3 LINE L1 -180 5982 5696 4 923 180 0 0 0 chr15 44344623 44344643 -59150331 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 4 923 712 236 0 57 chr15 44344652 44344809 -59150165 - B1_Mur1 SINE Alu -1 148 1 4 923 300 83 0 0 chr15 44345250 44345298 -59149676 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 923 26 0 0 0 chr15 44346153 44346179 -59148795 + AT_rich Low_complexity Low_complexity 1 26 0 4 923 1235 34 0 0 chr15 44346907 44347055 -59147919 - B1_Mus1 SINE Alu 0 148 1 4 923 228 86 0 0 chr15 44347158 44347193 -59147781 + (TTTTTG)n Simple_repeat Simple_repeat 6 40 0 4 923 1172 41 7 0 chr15 44347193 44347339 -59147635 - B1_Mus2 SINE Alu 0 147 1 4 923 205 156 0 0 chr15 44347414 44347461 -59147513 + (TGAA)n Simple_repeat Simple_repeat 1 47 0 4 923 23 0 0 0 chr15 44347795 44347818 -59147156 + AT_rich Low_complexity Low_complexity 1 23 0 4 923 297 0 0 0 chr15 44348662 44348695 -59146279 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 923 513 0 0 0 chr15 44349907 44349964 -59145010 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 923 358 234 13 13 chr15 44350172 44350250 -59144724 - ID4_ SINE ID -3 80 3 4 923 1542 73 9 5 chr15 44350716 44350936 -59144038 - L1_Mus3 LINE L1 -2 6636 6416 4 923 22 0 0 0 chr15 44353329 44353351 -59141623 + AT_rich Low_complexity Low_complexity 1 22 0 4 923 369 265 12 12 chr15 44354004 44354088 -59140886 - B4 SINE B4 -205 87 4 4 923 704 180 61 1 chr15 44354288 44354466 -59140508 - L1MA4 LINE L1 -379 5921 5672 4 923 414 176 0 0 chr15 44354585 44354670 -59140304 + (CA)n Simple_repeat Simple_repeat 2 86 0 4 923 22 0 0 0 chr15 44354804 44354826 -59140148 + AT_rich Low_complexity Low_complexity 1 22 0 4 923 689 288 11 16 chr15 44357033 44357220 -59137754 - B3A SINE B2 -4 194 9 4 923 51 51 0 0 chr15 44359445 44359524 -59135450 + AT_rich Low_complexity Low_complexity 1 79 0 4 923 667 286 107 32 chr15 44360039 44360414 -59134560 - L1MB7 LINE L1 -81 6103 5701 4 923 807 258 28 0 chr15 44362219 44362397 -59132577 - MTD LTR MaLR -92 327 145 4 923 22 35 0 0 chr15 44362985 44363014 -59131960 + AT_rich Low_complexity Low_complexity 1 29 0 4 923 503 226 57 0 chr15 44363458 44363564 -59131410 - B3 SINE B2 -103 113 2 4 923 24 53 0 0 chr15 44363640 44363678 -59131296 + AT_rich Low_complexity Low_complexity 1 38 0 5 923 646 229 0 0 chr15 44364153 44364284 -59130690 - B1_Mus2 SINE Alu 0 147 17 5 923 1199 174 118 3 chr15 44365700 44365989 -59128985 + Lx9 LINE L1 7322 7643 -1 5 923 253 235 45 59 chr15 44366071 44366211 -59128763 + MIR SINE MIR 90 233 -35 5 923 196 275 100 60 chr15 44366251 44366416 -59128558 + MIRm SINE MIR 48 207 -55 5 923 864 144 22 0 chr15 44366486 44366625 -59128349 - B1_Mur4 SINE Alu -6 144 3 5 923 635 201 95 126 chr15 44369476 44369801 -59125173 - RMER2 LTR ERV1 -165 402 3 5 923 800 129 18 109 chr15 44372645 44372810 -59122164 + B1_Mur4 SINE Alu 1 150 0 5 923 225 303 39 13 chr15 44372990 44373067 -59121907 + Charlie15a DNA MER1_type 141 219 -5 5 923 38 0 0 0 chr15 44374041 44374079 -59120895 + AT_rich Low_complexity Low_complexity 1 38 0 5 923 552 321 125 10 chr15 44374482 44374674 -59120300 - MER20 DNA MER1_type -1 218 5 5 923 409 349 36 46 chr15 44375725 44375920 -59119054 - MER20 DNA MER1_type -24 195 3 5 923 441 410 37 40 chr15 44375924 44376252 -59118722 - MLT1I LTR MaLR -18 393 67 5 923 34 0 0 0 chr15 44376872 44376906 -59118068 + AT_rich Low_complexity Low_complexity 1 34 0 5 923 794 204 0 0 chr15 44379106 44379248 -59115726 + B1_Mus1 SINE Alu 6 147 -1 5 923 483 18 0 0 chr15 44379361 44379417 -59115557 + (TCC)n Simple_repeat Simple_repeat 3 58 0 5 923 1013 76 0 7 chr15 44379702 44379847 -59115127 + (TTTC)n Simple_repeat Simple_repeat 2 145 0 5 923 4490 98 35 3 chr15 44379854 44380521 -59114453 - Lx3_Mus LINE L1 -11 6998 6311 5 923 2861 93 27 2 chr15 44380521 44380930 -59114044 - Lx3A LINE L1 -266 6715 6297 5 923 725 106 18 9 chr15 44380930 44381044 -59113930 - B1_Mus1 SINE Alu 0 148 34 5 923 228 154 91 15 chr15 44380990 44381056 -59113918 - 4.5SRNA scRNA scRNA -11 83 13 5 923 40 0 0 0 chr15 44381368 44381408 -59113566 + AT_rich Low_complexity Low_complexity 1 40 0 5 923 182 118 29 0 chr15 44382650 44382684 -59112290 + (CATA)n Simple_repeat Simple_repeat 2 36 0 5 923 252 322 31 85 chr15 44383248 44383377 -59111597 - ORR1D1 LTR MaLR -237 137 16 5 923 759 249 57 13 chr15 44383579 44383807 -59111167 - Tigger5 DNA MER2_type -3 2403 2166 5 923 4414 67 3 28 chr15 44384346 44384948 -59110026 - LTRIS_Mus LTR ERV1 0 587 1 5 923 315 146 0 0 chr15 44385475 44385530 -59109444 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 5 923 851 191 0 0 chr15 44385797 44385938 -59109036 + B1_Mus2 SINE Alu 1 141 -6 5 923 495 0 0 0 chr15 44385940 44385995 -59108979 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 5 923 249 128 0 0 chr15 44386329 44386376 -59108598 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 923 448 296 143 19 chr15 44386377 44386635 -59108339 - B4A SINE B4 0 292 3 5 923 252 86 0 0 chr15 44387156 44387191 -59107783 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 923 42 48 0 0 chr15 44387877 44387940 -59107034 + AT_rich Low_complexity Low_complexity 1 63 0 5 923 613 223 9 0 chr15 44388010 44388122 -59106852 - B3 SINE B2 -103 113 1 5 923 331 355 24 0 chr15 44389769 44389893 -59105081 + PB1 SINE Alu 1 127 0 5 923 300 91 0 0 chr15 44390305 44390349 -59104625 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 923 26 50 0 0 chr15 44390507 44390547 -59104427 + AT_rich Low_complexity Low_complexity 1 40 0 5 923 21 0 0 0 chr15 44390600 44390621 -59104353 + AT_rich Low_complexity Low_complexity 1 21 0 5 923 545 286 6 60 chr15 44390837 44391019 -59103955 - Lx8 LINE L1 -611 6862 6691 5 923 383 250 103 31 chr15 44391017 44391096 -59103878 + Lx8 LINE L1 7265 7343 -130 5 923 234 0 0 0 chr15 44391096 44391122 -59103852 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 5 923 383 250 103 31 chr15 44391122 44391236 -59103738 + Lx8 LINE L1 7344 7471 -2 5 923 278 348 112 32 chr15 44391311 44391498 -59103476 + MIRb SINE MIR 22 223 -45 5 923 939 238 29 5 chr15 44394626 44394833 -59100141 + B3 SINE B2 1 212 -4 5 923 467 291 48 33 chr15 44395282 44395492 -59099482 + L1MA4 LINE L1 5708 5920 -380 5 923 243 125 0 0 chr15 44396526 44396566 -59098408 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 923 902 239 124 8 chr15 44396637 44396886 -59098088 - B4A SINE B4 -12 280 3 5 923 243 222 0 0 chr15 44397169 44397214 -59097760 - RMER15 LTR ERVL -447 128 84 5 923 318 300 10 0 chr15 44397509 44397609 -59097365 + MER106A DNA MER1_type 55 155 -81 5 923 501 202 92 0 chr15 44397998 44398107 -59096867 + B3 SINE B2 1 119 -97 5 923 422 265 49 0 chr15 44398617 44398719 -59096255 - RSINE1 SINE B4 -17 148 42 5 923 234 281 96 10 chr15 44398815 44398919 -59096055 + Charlie8 DNA MER1_type 349 461 -1967 5 923 477 326 39 8 chr15 44398932 44399062 -59095912 + RSINE1 SINE B4 6 139 -26 5 923 390 91 0 0 chr15 44399068 44399123 -59095851 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 923 746 181 6 89 chr15 44399276 44399434 -59095540 - B1_Mur4 SINE Alu 0 150 6 5 923 329 263 0 123 chr15 44399334 44399464 -59095510 - MT2B LTR ERVL -344 257 144 5 923 30 69 0 0 chr15 44399694 44399752 -59095222 + AT_rich Low_complexity Low_complexity 1 58 0 5 923 742 246 49 29 chr15 44399967 44400172 -59094802 + MER3 DNA MER1_type 1 209 0 5 923 879 233 57 0 chr15 44400227 44400420 -59094554 + B3 SINE B2 3 206 -10 5 923 503 296 0 25 chr15 44400485 44400603 -59094371 - RSINE1 SINE B4 -36 129 15 5 923 311 44 22 0 chr15 44401762 44401807 -59093167 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 923 273 89 0 0 chr15 44401825 44401870 -59093104 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 5 923 255 292 14 27 chr15 44401870 44401938 -59093036 - ID4 SINE ID -13 70 2 5 923 308 311 0 0 chr15 44403113 44403187 -59091787 + B4A SINE B4 6 79 -213 5 923 262 300 0 0 chr15 44403284 44403364 -59091610 + (CA)n Simple_repeat Simple_repeat 1 80 0 5 923 31 104 0 0 chr15 44403787 44403902 -59091072 + AT_rich Low_complexity Low_complexity 1 115 0 5 923 608 265 15 0 chr15 44403974 44404106 -59090868 + B3 SINE B2 80 213 -3 5 923 483 281 179 43 chr15 44406525 44406759 -59088215 - B4A SINE B4 -22 270 5 5 923 21 0 0 0 chr15 44406764 44406785 -59088189 + AT_rich Low_complexity Low_complexity 1 21 0 5 923 8601 158 45 26 chr15 44406821 44408600 -59086374 - Lx2B LINE L1 -550 6450 4629 5 923 222 37 0 0 chr15 44408600 44408627 -59086347 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 5 923 8601 145 27 31 chr15 44408627 44408971 -59086003 - Lx2B LINE L1 -1249 4628 4274 5 923 352 340 68 88 chr15 44409418 44409885 -59085089 - MLT1H LTR MaLR 0 549 45 5 923 302 351 72 0 chr15 44411239 44411350 -59083624 + LTR16A1 LTR ERVL 3 121 -335 5 923 3455 160 64 31 chr15 44411566 44412236 -59082738 - RLTR17 LTR ERVK 0 692 1 5 923 206 241 17 17 chr15 44414070 44414129 -59080845 + GA-rich Low_complexity Low_complexity 5 63 0 5 923 225 309 86 40 chr15 44414930 44415105 -59079869 + MER113 DNA MER1_type 305 487 -34 5 923 216 254 15 31 chr15 44415740 44415805 -59079169 + B1_Mur4 SINE Alu 83 146 -4 5 923 289 327 9 18 chr15 44416833 44416945 -59078029 - MARNA DNA Mariner -122 464 354 5 923 193 342 202 45 chr15 44417147 44417529 -59077445 + L2 LINE L2 2471 2912 -507 5 923 329 75 0 19 chr15 44418623 44418677 -59076297 + (TTAGGG)n Simple_repeat Simple_repeat 3 55 0 5 923 180 0 0 0 chr15 44419163 44419183 -59075791 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 5 923 541 224 97 0 chr15 44419183 44419307 -59075667 - B1_Mur3 SINE Alu -10 139 3 5 923 529 342 75 8 chr15 44419337 44419576 -59075398 - MLT1A LTR MaLR -119 255 1 5 923 194 302 0 0 chr15 44422617 44422670 -59072304 - L2 LINE L2 -610 2809 2757 5 923 3414 155 135 42 chr15 44423615 44424555 -59070419 - L1_Mur2 LINE L1 -3940 1937 898 5 923 1156 62 0 0 chr15 44424899 44425045 -59069929 + B1_Mus2 SINE Alu 2 147 0 5 923 186 43 0 0 chr15 44425045 44425068 -59069906 + (A)n Simple_repeat Simple_repeat 1 23 0 5 923 1021 231 80 0 chr15 44425214 44425439 -59069535 - MTD LTR MaLR -176 243 1 5 923 477 357 45 20 chr15 44425439 44425639 -59069335 + B4A SINE B4 46 250 -42 5 923 490 14 58 0 chr15 44425706 44425775 -59069199 + (CATA)n Simple_repeat Simple_repeat 2 74 0 5 923 1357 70 22 0 chr15 44426647 44426832 -59068142 - B2_Mm1t SINE B2 -3 190 2 5 923 21 36 0 0 chr15 44426946 44426974 -59068000 + AT_rich Low_complexity Low_complexity 1 28 0 5 923 25 65 0 0 chr15 44426984 44427030 -59067944 + AT_rich Low_complexity Low_complexity 1 46 0 5 923 1526 217 191 21 chr15 44427122 44427498 -59067476 - Lx5 LINE L1 0 7050 6611 5 923 1177 166 0 43 chr15 44427497 44427705 -59067269 + Lx5 LINE L1 6348 6546 -504 5 923 740 266 97 4 chr15 44427996 44428223 -59066751 - MTD LTR MaLR -13 406 159 5 923 520 315 152 32 chr15 44428994 44429309 -59065665 - MLT1K LTR MaLR -86 509 157 5 923 449 185 74 32 chr15 44429893 44429988 -59064986 + RMER10A LTR ERVL 3 101 -341 5 923 231 269 71 43 chr15 44430166 44430236 -59064738 + ID4_ SINE ID 3 74 -9 5 923 2168 129 24 201 chr15 44431030 44431572 -59063402 + RLTR41 LTR ERV1 1 446 0 5 923 22 80 0 0 chr15 44431735 44431785 -59063189 + AT_rich Low_complexity Low_complexity 1 50 0 5 923 1138 132 82 222 chr15 44431986 44432463 -59062511 - RMER17C LTR ERVK 0 410 1 5 923 286 270 76 59 chr15 44433030 44433148 -59061826 + PB1D9 SINE Alu 1 120 0 6 924 180 97 0 0 chr15 44434276 44434307 -59060667 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 6 924 300 27 0 0 chr15 44434307 44434344 -59060630 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 924 26 0 0 0 chr15 44435276 44435302 -59059672 + AT_rich Low_complexity Low_complexity 1 26 0 6 924 235 89 36 60 chr15 44435727 44435811 -59059163 + A-rich Low_complexity Low_complexity 4 85 0 6 924 1181 309 116 34 chr15 44435813 44436286 -59058688 + MER21B LTR ERV1 303 814 -49 6 924 470 207 21 29 chr15 44436531 44436653 -59058321 - MTE2a LTR MaLR 0 379 234 6 924 926 143 45 198 chr15 44436650 44437008 -59057966 - RMER17C LTR ERVK -90 320 18 6 924 232 192 38 19 chr15 44437388 44437441 -59057533 + CT-rich Low_complexity Low_complexity 3 56 0 6 924 2955 144 57 4 chr15 44437444 44437932 -59057042 + RMER20A LTR ERVK 1 514 -2 6 924 393 174 16 16 chr15 44437934 44438057 -59056917 + CT-rich Low_complexity Low_complexity 2 124 0 6 924 384 316 70 25 chr15 44438098 44438341 -59056633 - Lx8 LINE L1 -60 7413 7160 6 924 207 0 0 0 chr15 44438374 44438397 -59056577 + (A)n Simple_repeat Simple_repeat 1 23 0 6 924 292 337 49 49 chr15 44438576 44438779 -59056195 + RMER2 LTR ERV1 354 556 -11 6 924 2005 288 110 17 chr15 44438791 44438926 -59056048 - Lx8 LINE L1 -314 7159 7017 6 924 758 89 9 0 chr15 44438926 44439038 -59055936 + (TTTTC)n Simple_repeat Simple_repeat 2 114 0 6 924 2005 288 110 17 chr15 44439038 44439609 -59055365 - Lx8 LINE L1 -457 7016 6389 6 924 1111 56 21 0 chr15 44439613 44439757 -59055217 + B1_Mus1 SINE Alu 2 148 0 6 924 180 0 0 0 chr15 44439757 44439777 -59055197 + (A)n Simple_repeat Simple_repeat 1 20 0 6 924 1330 264 98 60 chr15 44439839 44440513 -59054461 - RMER1B Other Other -470 596 2 6 924 1792 155 9 53 chr15 44440878 44441014 -59053960 + MTC LTR MaLR 96 233 -188 6 924 2894 26 15 0 chr15 44441014 44441355 -59053619 + ORR1A0 LTR MaLR 1 346 0 6 924 14430 44 2 3 chr15 44441355 44443148 -59051826 + ORR1A0-int LTR MaLR 1 1792 0 6 924 2921 24 15 0 chr15 44443148 44443489 -59051485 + ORR1A0 LTR MaLR 1 346 0 6 924 1792 155 9 53 chr15 44443489 44443691 -59051283 + MTC LTR MaLR 234 419 -2 6 924 2125 146 94 75 chr15 44443713 44444150 -59050824 - RLTR41 LTR ERV1 0 446 2 6 924 1234 35 0 0 chr15 44445842 44445986 -59048988 + B1_Mm SINE Alu 2 145 -2 6 924 185 156 0 62 chr15 44446403 44446451 -59048523 - L3 LINE CR1 -4429 60 16 6 924 1331 191 36 76 chr15 44446566 44446895 -59048079 - Lx4A LINE L1 -2 7056 6741 6 924 180 0 0 0 chr15 44446926 44446946 -59048028 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 6 924 961 52 231 19 chr15 44446964 44447120 -59047854 + B2_Mm2 SINE B2 2 190 -5 6 924 1630 205 22 66 chr15 44447173 44447539 -59047435 + RMER10B LTR ERVL 1 350 -48 6 924 347 99 11 0 chr15 44447536 44447594 -59047380 + B2_Mm2 SINE B2 53 114 -102 6 924 21 36 0 0 chr15 44447648 44447676 -59047298 + AT_rich Low_complexity Low_complexity 1 28 0 6 924 28 0 0 0 chr15 44447892 44447920 -59047054 + AT_rich Low_complexity Low_complexity 1 28 0 6 924 2141 181 30 20 chr15 44448450 44448857 -59046117 - MTC LTR MaLR -8 413 3 6 924 22 35 0 0 chr15 44448958 44448987 -59045987 + AT_rich Low_complexity Low_complexity 1 29 0 6 924 195 42 0 0 chr15 44449167 44449191 -59045783 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 6 924 323 226 146 31 chr15 44449422 44449518 -59045456 + PB1D10 SINE Alu 10 116 -1 6 924 216 0 0 0 chr15 44449726 44449750 -59045224 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 924 299 286 10 0 chr15 44453642 44453740 -59041234 - L1MA5A LINE L1 -361 5936 5838 6 924 2008 49 0 0 chr15 44454047 44454292 -59040682 + L1Md_F2 LINE L1 6326 6570 -12 6 924 1533 161 34 7 chr15 44454564 44454857 -59040117 + Lx4A LINE L1 6753 7053 -5 6 924 237 233 0 14 chr15 44455068 44455142 -59039832 + (TTTG)n Simple_repeat Simple_repeat 3 75 0 6 924 25 75 0 0 chr15 44455146 44455199 -59039775 + AT_rich Low_complexity Low_complexity 1 53 0 6 924 205 256 61 49 chr15 44455401 44455483 -59039491 + MER5B DNA MER1_type 74 156 -22 6 924 270 190 108 48 chr15 44455511 44455594 -59039380 + MIRb SINE MIR 79 166 -102 6 924 632 256 49 5 chr15 44456475 44456679 -59038295 + B3 SINE B2 1 213 -3 6 924 694 340 43 0 chr15 44456889 44457121 -59037853 + MER119 DNA MER1_type 104 345 -238 6 924 300 300 66 16 chr15 44457178 44457300 -59037674 - B1F SINE Alu 0 149 22 6 924 283 264 0 54 chr15 44457314 44457406 -59037568 + MER119 DNA MER1_type 405 491 -92 6 924 483 259 46 0 chr15 44457494 44457602 -59037372 + PB1D9 SINE Alu 8 120 0 6 924 198 103 0 0 chr15 44457602 44457631 -59037343 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 6 924 297 0 0 0 chr15 44459304 44459337 -59035637 + (TA)n Simple_repeat Simple_repeat 1 33 0 6 924 360 0 0 0 chr15 44459347 44459387 -59035587 + (TATAA)n Simple_repeat Simple_repeat 5 44 0 6 924 363 268 85 23 chr15 44459487 44459663 -59035311 - L1MEf LINE L1 -5451 749 563 6 924 358 340 73 33 chr15 44462243 44462496 -59032478 - MLT1F LTR MaLR -6 542 307 6 924 2954 92 25 34 chr15 44462789 44463230 -59031744 - RLTR9B LTR ERVK 0 437 1 6 924 273 91 68 0 chr15 44463246 44463290 -59031684 - ETnERV2-int LTR ERVK -29 7377 7331 6 924 540 243 37 62 chr15 44463508 44463883 -59031091 - ETnERV2-int LTR ERVK -984 6422 6105 6 924 6241 152 56 63 chr15 44463900 44465086 -59029888 - RMER16-int LTR ERVK -1233 4173 2981 6 924 1207 55 0 0 chr15 44465086 44465232 -59029742 - B1_Mm SINE Alu 0 147 2 6 924 6241 152 56 63 chr15 44465232 44465349 -59029625 - RMER16-int LTR ERVK -2426 2980 2869 6 924 189 0 0 0 chr15 44465349 44465370 -59029604 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 924 6241 152 56 63 chr15 44465370 44465386 -59029588 - RMER16-int LTR ERVK -2538 2868 2868 6 924 225 0 0 0 chr15 44465386 44465411 -59029563 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 924 6241 152 56 63 chr15 44465411 44465509 -59029465 - RMER16-int LTR ERVK -2538 2868 2764 6 924 1449 156 39 104 chr15 44465499 44466037 -59028937 - ETnERV2-int LTR ERVK -4408 2998 2354 6 924 306 227 0 0 chr15 44466092 44466167 -59028807 + (TG)n Simple_repeat Simple_repeat 1 75 0 6 924 797 275 67 50 chr15 44466171 44466454 -59028520 - B4A SINE B4 0 292 5 6 924 322 307 172 22 chr15 44467167 44467347 -59027627 - HAL1-3A_ME LINE L1 -672 2186 1980 6 924 1495 275 66 58 chr15 44467375 44468044 -59026930 - Lx8 LINE L1 -201 7272 6599 6 924 195 42 0 0 chr15 44468622 44468646 -59026328 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 6 924 1140 112 0 24 chr15 44468646 44468811 -59026163 - B2_Mm2 SINE B2 -33 162 2 6 924 550 226 190 11 chr15 44469286 44469465 -59025509 + B3 SINE B2 1 211 -5 6 924 217 246 0 0 chr15 44469665 44469722 -59025252 + T-rich Low_complexity Low_complexity 1 57 0 6 924 21 0 0 0 chr15 44469885 44469906 -59025068 + AT_rich Low_complexity Low_complexity 1 21 0 6 924 447 52 0 0 chr15 44470392 44470450 -59024524 + (TTTTA)n Simple_repeat Simple_repeat 3 60 0 6 924 1219 61 0 0 chr15 44470452 44470600 -59024374 - B1_Mus1 SINE Alu 0 148 1 6 924 210 328 92 17 chr15 44471566 44471700 -59023274 + MIR SINE MIR 66 199 -69 6 924 22 0 0 0 chr15 44472353 44472375 -59022599 + AT_rich Low_complexity Low_complexity 1 22 0 6 924 233 29 0 29 chr15 44472832 44472867 -59022107 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 924 663 210 89 41 chr15 44473328 44473497 -59021477 - B2_Mm2 SINE B2 -18 177 1 6 924 642 121 20 10 chr15 44474006 44474106 -59020868 - B1_Mus2 SINE Alu -1 146 46 6 924 294 319 103 2 chr15 44475621 44475720 -59019254 + B1F SINE Alu 1 111 -9 6 924 476 235 96 0 chr15 44476494 44476609 -59018365 + B1_Mur1 SINE Alu 5 130 -19 6 924 21 0 0 0 chr15 44476999 44477020 -59017954 + AT_rich Low_complexity Low_complexity 1 21 0 6 924 1107 260 116 34 chr15 44477100 44477574 -59017400 - Lx6 LINE L1 -1 7459 6947 6 924 9815 190 52 26 chr15 44477591 44478624 -59016350 - Lx5 LINE L1 -897 4980 3909 6 924 2712 47 12 0 chr15 44478624 44478943 -59016031 - ORR1A2 LTR MaLR 0 327 5 6 924 9815 190 52 26 chr15 44478943 44480393 -59014581 - Lx5 LINE L1 -1969 3908 2432 6 924 195 69 0 0 chr15 44480431 44480460 -59014514 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 6 924 37141 29 1 0 chr15 44480466 44485830 -59009144 - L1Md_T LINE L1 0 6582 1216 6 924 3102 8 43 0 chr15 44485830 44486182 -59008792 + IAPLTR1_Mm LTR ERVK 1 367 0 6 924 4636 68 17 15 chr15 44486182 44486836 -59008138 + IAPEz-int LTR ERVK 8 662 -5819 6 924 424 38 0 0 chr15 44486836 44486889 -59008085 + IAPEz-int LTR ERVK 1359 1411 -5070 6 924 1669 123 4 15 chr15 44486888 44487153 -59007821 + IAPEz-int LTR ERVK 2236 2497 -5183 6 924 869 81 24 0 chr15 44487150 44487273 -59007701 + IAPEz-int LTR ERVK 4785 4910 -2770 6 924 25107 17 1 2 chr15 44487273 44490232 -59004742 + IAPEz-int LTR ERVK 3525 6481 0 6 924 3102 8 43 0 chr15 44490232 44490584 -59004390 + IAPLTR1_Mm LTR ERVK 1 367 0 6 924 5701 112 51 0 chr15 44490584 44491562 -59003412 - L1Md_T LINE L1 -5865 1221 260 6 924 244 32 0 0 chr15 44491557 44491588 -59003386 - Lx3_Mus LINE L1 -604 6405 6375 6 924 2756 183 44 28 chr15 44491586 44492857 -59002117 - Lx5 LINE L1 -716 6334 5712 6 924 1424 55 28 0 chr15 44492857 44493039 -59001935 - B2_Mm2 SINE B2 -5 190 4 6 924 2727 201 177 14 chr15 44493039 44493827 -59001147 - Lx5 LINE L1 -166 5711 4836 6 924 1190 128 32 0 chr15 44493820 44494008 -59000966 + Lx5 LINE L1 6335 6528 -522 6 924 2055 184 21 38 chr15 44494008 44494427 -59000547 + Lx5 LINE L1 6636 7047 -3 6 924 1420 150 47 44 chr15 44494433 44494598 -59000376 - L1_Mur2 LINE L1 -4333 1544 1381 6 924 1477 142 20 0 chr15 44494598 44494845 -59000129 - Lx LINE L1 0 6654 6403 6 924 1420 170 60 55 chr15 44494845 44495201 -58999773 - L1_Mur2 LINE L1 -4497 1380 1028 6 924 5496 106 76 21 chr15 44495201 44496060 -58998914 + RMER17A2 LTR ERVK 1 906 0 6 924 1045 202 87 36 chr15 44496060 44496231 -58998743 - L1_Mur2 LINE L1 -6640 1088 904 6 924 309 306 80 44 chr15 44496690 44496803 -58998171 - PB1D9 SINE Alu -1 119 3 6 924 392 323 0 20 chr15 44496846 44496944 -58998030 + PB1D10 SINE Alu 11 106 -11 6 924 29 0 0 0 chr15 44498014 44498043 -58996931 + AT_rich Low_complexity Low_complexity 1 29 0 6 924 810 181 0 20 chr15 44498046 44498193 -58996781 - B1_Mus1 SINE Alu -4 144 1 6 924 198 0 0 0 chr15 44498825 44498847 -58996127 + (T)n Simple_repeat Simple_repeat 1 22 0 6 924 198 0 0 0 chr15 44499949 44499971 -58995003 + (TG)n Simple_repeat Simple_repeat 1 22 0 6 924 420 243 80 18 chr15 44500001 44500114 -58994860 - Lx7 LINE L1 -1178 6295 6176 1 924 333 0 0 0 chr15 44500153 44500190 -58994784 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 924 755 218 119 8 chr15 44500335 44500652 -58994322 - Lx7 LINE L1 -1670 5974 5631 1 924 956 250 144 20 chr15 44500733 44501137 -58993837 - Lx7 LINE L1 -6255 1353 900 1 924 398 324 193 29 chr15 44501375 44502042 -58992932 + L2 LINE L2 1925 2701 -718 3 924 423 0 0 0 chr15 44502092 44502139 -58992835 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 924 180 264 78 65 chr15 44502412 44502489 -58992485 - L2b LINE L2 -35 3340 3263 5 924 311 150 17 0 chr15 44503069 44503129 -58991845 + GA-rich Low_complexity Low_complexity 2 62 0 6 924 318 261 65 43 chr15 44503174 44503266 -58991708 - B3A SINE B2 -103 95 2 7 924 306 0 0 0 chr15 44505295 44505329 -58989645 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 924 373 81 32 0 chr15 44505551 44505613 -58989361 + (TA)n Simple_repeat Simple_repeat 2 65 0 9 924 982 155 198 17 chr15 44507122 44507299 -58987675 - B3 SINE B2 -6 210 2 1 924 380 323 93 29 chr15 44507547 44507751 -58987223 + MLT1A LTR MaLR 151 367 -7 1 924 342 0 0 0 chr15 44509726 44509764 -58985210 + (T)n Simple_repeat Simple_repeat 1 38 0 1 924 1318 20 0 7 chr15 44509764 44509912 -58985062 - B1_Mm SINE Alu 0 147 1 1 924 225 214 28 14 chr15 44510026 44510097 -58984877 + (CA)n Simple_repeat Simple_repeat 2 73 0 1 924 424 286 107 16 chr15 44510141 44510262 -58984712 + ID_B1 SINE B4 80 211 -13 1 924 1271 61 0 0 chr15 44511546 44511693 -58983281 + B1_Mus2 SINE Alu 1 147 0 1 924 433 90 11 43 chr15 44512067 44512160 -58982814 + (TCC)n Simple_repeat Simple_repeat 1 90 0 1 924 1045 282 54 30 chr15 44512178 44512551 -58982423 + MLT1B LTR MaLR 1 382 -8 1 924 381 312 63 31 chr15 44512975 44513134 -58981840 + B3A SINE B2 35 198 0 1 924 447 19 0 0 chr15 44513911 44513963 -58981011 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 924 351 0 0 0 chr15 44513969 44514008 -58980966 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 924 300 376 24 3 chr15 44514265 44514433 -58980541 - MIR SINE MIR -91 177 7 2 924 216 238 0 0 chr15 44515009 44515051 -58979923 + GA-rich Low_complexity Low_complexity 2 43 0 2 924 446 292 61 61 chr15 44517301 44517465 -58977509 + RSINE1 SINE B4 2 165 0 2 924 467 239 76 17 chr15 44517535 44517654 -58977320 - PB1 SINE Alu -1 126 1 2 924 185 281 15 30 chr15 44517877 44517943 -58977031 + MIR SINE MIR 68 132 -76 2 924 2537 82 3 12 chr15 44518177 44518511 -58976463 - L1Md_F2 LINE L1 -4 6578 6248 2 924 211 297 21 52 chr15 44518570 44518666 -58976308 - MIR SINE MIR -15 247 155 2 924 621 0 0 0 chr15 44521509 44521578 -58973396 + (GA)n Simple_repeat Simple_repeat 2 70 0 2 924 21 0 0 0 chr15 44522258 44522279 -58972695 + AT_rich Low_complexity Low_complexity 1 21 0 3 924 513 58 0 0 chr15 44522434 44522503 -58972471 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 924 234 0 0 0 chr15 44523240 44523266 -58971708 + (A)n Simple_repeat Simple_repeat 1 26 0 3 924 261 0 0 0 chr15 44523306 44523335 -58971639 + (T)n Simple_repeat Simple_repeat 1 29 0 3 924 200 269 0 37 chr15 44523867 44523921 -58971053 + MIR SINE MIR 69 120 -142 3 924 285 29 0 0 chr15 44525244 44525278 -58969696 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 924 1103 236 9 14 chr15 44525278 44525491 -58969483 - ID_B1 SINE B4 -10 214 1 3 924 192 77 0 0 chr15 44525660 44525686 -58969288 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 3 924 212 288 17 0 chr15 44526767 44526826 -58968148 + MIRc SINE MIR 69 128 -140 3 924 4868 110 13 54 chr15 44526992 44527753 -58967221 + Lx LINE L1 5923 6652 -2 3 924 475 86 14 0 chr15 44528091 44528102 -58966872 + L1_Mus2 LINE L1 6099 6110 -456 4 924 3611 48 0 2 chr15 44528102 44528518 -58966456 - L1_Mus2 LINE L1 0 6566 6152 4 924 475 86 14 0 chr15 44528518 44528576 -58966398 + L1_Mus2 LINE L1 6111 6168 -398 4 924 1353 269 122 11 chr15 44528682 44529141 -58965833 - Lx6 LINE L1 -4 7456 6947 4 924 252 315 44 22 chr15 44529373 44529464 -58965510 + L2c LINE L2 3034 3126 -261 4 924 183 212 109 130 chr15 44529841 44529933 -58965041 + L2c LINE L2 3280 3369 -18 4 924 458 346 159 25 chr15 44530153 44530467 -58964507 + L3 LINE CR1 3286 3641 -848 4 924 2097 144 92 29 chr15 44530870 44531250 -58963724 + MTB_Mm LTR MaLR 1 404 -3 4 924 378 0 0 0 chr15 44531250 44531292 -58963682 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 924 1298 48 0 0 chr15 44531567 44531713 -58963261 + B1_Mm SINE Alu 2 147 0 4 924 646 61 41 0 chr15 44532146 44532244 -58962730 + (TATG)n Simple_repeat Simple_repeat 2 103 0 4 924 211 237 34 0 chr15 44533694 44533753 -58961221 - L2c LINE L2 -8 3379 3319 4 924 378 0 0 0 chr15 44533872 44533914 -58961060 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 924 1166 53 26 0 chr15 44534096 44534248 -58960726 + ORR1A1 LTR MaLR 141 296 -50 5 924 413 81 16 0 chr15 44535161 44535223 -58959751 + (TTTTC)n Simple_repeat Simple_repeat 2 64 0 5 924 189 0 0 0 chr15 44535654 44535675 -58959299 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 5 924 397 150 52 8 chr15 44536418 44536552 -58958422 + (CA)n Simple_repeat Simple_repeat 2 141 0 5 924 297 151 0 0 chr15 44537800 44537853 -58957121 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 924 426 388 31 9 chr15 44539058 44539284 -58955690 + Kanga2_a DNA Tc2 7 237 -651 5 924 1407 186 67 102 chr15 44539342 44539762 -58955212 - Lx9 LINE L1 -10 7634 7230 5 924 255 182 55 0 chr15 44539807 44539862 -58955112 + Kanga2_a DNA Tc2 328 385 -503 5 924 572 240 48 0 chr15 44540494 44540619 -58954355 + B1_Mur1 SINE Alu 6 136 -13 5 924 405 0 0 0 chr15 44540622 44540667 -58954307 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 924 1847 183 115 33 chr15 44541739 44541995 -58952979 + MT2A LTR ERVL 2 287 -246 5 924 4295 74 7 7 chr15 44541995 44542538 -58952436 - L1_Mus2 LINE L1 0 6566 6024 6 924 1847 183 115 33 chr15 44542538 44542700 -58952274 + MT2A LTR ERVL 288 454 -79 5 924 263 235 0 29 chr15 44542701 44542771 -58952203 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 6 924 878 240 134 35 chr15 44543592 44543933 -58951041 - MTD LTR MaLR -15 404 1 6 924 205 218 18 0 chr15 44544421 44544476 -58950498 + (TA)n Simple_repeat Simple_repeat 1 56 0 6 924 187 342 121 24 chr15 44544566 44544731 -58950243 + MIR SINE MIR 12 192 -70 6 924 3016 210 105 18 chr15 44544985 44545708 -58949266 + Lx7 LINE L1 6428 7213 -483 6 924 1684 41 0 0 chr15 44545698 44545892 -58949082 + L1Md_F2 LINE L1 5393 5586 -297 6 924 8594 49 7 0 chr15 44545892 44546880 -58948094 + L1Md_F2 LINE L1 5587 6581 -1 6 924 189 0 0 0 chr15 44546910 44546931 -58948043 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 924 930 201 33 71 chr15 44546945 44547379 -58947595 + Lx7 LINE L1 7200 7660 -36 6 924 447 230 51 35 chr15 44547441 44547566 -58947408 + B1F SINE Alu 9 121 -28 6 924 1201 155 117 12 chr15 44549937 44550185 -58944789 + Lx9 LINE L1 7360 7633 -11 6 924 52 85 0 0 chr15 44550185 44550314 -58944660 + AT_rich Low_complexity Low_complexity 1 129 0 7 924 2079 161 102 16 chr15 44550733 44551105 -58943869 - MTB_Mm LTR MaLR 0 407 4 7 924 533 226 42 34 chr15 44551255 44551374 -58943600 - PB1D9 SINE Alu 0 120 1 7 924 1097 35 7 7 chr15 44551778 44551920 -58943054 + B1_Mm SINE Alu 6 147 0 7 924 21 0 0 0 chr15 44552485 44552506 -58942468 + AT_rich Low_complexity Low_complexity 1 21 0 7 924 1097 220 5 50 chr15 44554341 44554561 -58940413 + B3 SINE B2 1 210 -6 7 924 3126 27 0 0 chr15 44554667 44555004 -58939970 + IAPLTR1a_Mm LTR ERVK 1 337 0 7 924 21609 33 31 13 chr15 44555004 44558076 -58936898 + IAPEz-int LTR ERVK 8 3165 -3316 7 924 9313 30 2 4 chr15 44558065 44559205 -58935769 + IAPEz-int LTR ERVK 5345 6481 0 7 924 2988 21 0 0 chr15 44559205 44559542 -58935432 + IAPLTR1a_Mm LTR ERVK 1 337 0 7 924 204 40 0 0 chr15 44559745 44559770 -58935204 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 924 940 258 178 23 chr15 44559825 44560167 -58934807 - MTC LTR MaLR -26 395 1 7 924 251 170 0 54 chr15 44560469 44560525 -58934449 + 4.5SRNA scRNA scRNA 36 88 -6 7 924 599 157 59 0 chr15 44560475 44560577 -58934397 + B1_Mur2 SINE Alu 42 149 0 8 924 222 118 0 0 chr15 44560657 44560691 -58934283 + (CTG)n Simple_repeat Simple_repeat 3 36 0 8 924 279 0 0 0 chr15 44560691 44560722 -58934252 + (TGG)n Simple_repeat Simple_repeat 1 31 0 8 924 23 78 0 0 chr15 44561107 44561158 -58933816 + AT_rich Low_complexity Low_complexity 1 51 0 8 924 28 48 0 0 chr15 44561319 44561361 -58933613 + AT_rich Low_complexity Low_complexity 1 42 0 8 924 667 282 6 0 chr15 44561631 44561801 -58933173 + ID_B1 SINE B4 51 221 -3 8 924 289 283 72 46 chr15 44561666 44561818 -58933156 - YREP_Mm Unknown Unknown -1501 311 156 8 924 479 321 76 0 chr15 44562339 44562523 -58932451 + MER58A DNA MER1_type 9 206 -18 8 924 610 259 0 47 chr15 44562839 44562989 -58931985 - B1_Mur1 SINE Alu 0 149 7 8 924 260 363 48 19 chr15 44562896 44563000 -58931974 - B4A SINE B4 -105 187 81 8 924 35 63 0 0 chr15 44563000 44563063 -58931911 + AT_rich Low_complexity Low_complexity 1 63 0 9 924 873 136 7 35 chr15 44563624 44563769 -58931205 - B1_Mur3 SINE Alu -7 142 2 9 924 424 266 26 115 chr15 44563769 44563835 -58931139 - MT2B LTR ERVL -448 153 105 9 924 21 0 0 0 chr15 44563923 44563944 -58931030 + AT_rich Low_complexity Low_complexity 1 21 0 9 924 805 197 0 7 chr15 44564224 44564367 -58930607 + B1_Mus2 SINE Alu 5 146 -1 9 925 290 172 0 108 chr15 44564753 44564818 -58930156 - L2c LINE L2 -3 3384 3327 9 925 767 21 0 20 chr15 44565102 44565200 -58929774 + (TTTCC)n Simple_repeat Simple_repeat 4 99 0 9 925 186 309 105 21 chr15 44565575 44565701 -58929273 - L2b LINE L2 -24 3351 3237 9 925 296 83 21 0 chr15 44565845 44565893 -58929081 + (GGAA)n Simple_repeat Simple_repeat 1 49 0 9 925 295 330 138 15 chr15 44566187 44566390 -58928584 - MIR SINE MIR -27 235 8 9 925 235 299 72 0 chr15 44567039 44567136 -58927838 - L2b LINE L2 -1541 1878 1775 9 925 582 207 196 5 chr15 44567624 44567813 -58927161 - URR1B DNA MER1_type 0 225 1 1 925 560 230 6 0 chr15 44567923 44568084 -58926890 + (TA)n Simple_repeat Simple_repeat 2 163 0 1 925 325 212 225 0 chr15 44568456 44568536 -58926438 - B3A SINE B2 -82 116 19 1 925 1207 61 0 0 chr15 44571577 44571724 -58923250 + B1_Mus2 SINE Alu 1 147 0 1 925 186 43 0 0 chr15 44571724 44571747 -58923227 + (A)n Simple_repeat Simple_repeat 1 23 0 1 925 542 126 18 0 chr15 44572830 44572941 -58922033 + Lx9 LINE L1 7531 7643 -1 1 925 1892 83 69 3 chr15 44573111 44573402 -58921572 + L1Md_F2 LINE L1 6249 6558 -24 1 925 333 0 0 0 chr15 44573402 44573439 -58921535 + (TAA)n Simple_repeat Simple_repeat 3 39 0 1 925 218 269 15 15 chr15 44575164 44575296 -58919678 + (TA)n Simple_repeat Simple_repeat 1 132 0 1 925 620 183 2 25 chr15 44575314 44575765 -58919209 + (TA)n Simple_repeat Simple_repeat 1 440 0 1 925 28 0 0 0 chr15 44575830 44575858 -58919116 + AT_rich Low_complexity Low_complexity 1 28 0 1 925 530 257 0 6 chr15 44577004 44577180 -58917794 + (TA)n Simple_repeat Simple_repeat 1 175 0 1 925 248 351 25 34 chr15 44577267 44577385 -58917589 - MIRm SINE MIR -110 166 50 1 925 270 0 0 0 chr15 44578186 44578216 -58916758 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 925 640 236 40 7 chr15 44578760 44578909 -58916065 + RSINE1 SINE B4 12 165 0 1 925 190 286 22 87 chr15 44578947 44579039 -58915935 - MIRb SINE MIR -66 202 117 1 925 31 0 0 0 chr15 44579137 44579168 -58915806 + AT_rich Low_complexity Low_complexity 1 31 0 1 925 213 39 0 0 chr15 44579903 44579929 -58915045 + (CCG)n Simple_repeat Simple_repeat 1 26 0 1 925 30 0 0 0 chr15 44580048 44580078 -58914896 + GC_rich Low_complexity Low_complexity 1 30 0 1 925 211 271 82 0 chr15 44582549 44582634 -58912340 + L2a LINE L2 3335 3426 0 1 925 267 31 0 0 chr15 44584950 44584982 -58909992 + (T)n Simple_repeat Simple_repeat 1 32 0 1 925 332 299 47 5 chr15 44586303 44586430 -58908544 + MIR SINE MIR 91 230 -38 1 925 339 309 18 35 chr15 44586955 44587126 -58907848 + CT-rich Low_complexity Low_complexity 5 172 0 1 925 795 71 27 0 chr15 44587330 44587435 -58907539 + B1_Mus2 SINE Alu 31 138 -9 1 925 198 0 0 0 chr15 44587435 44587457 -58907517 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 1 925 244 232 0 144 chr15 44588026 44588137 -58906837 - L1MC2 LINE L1 0 6344 6250 1 925 212 0 36 0 chr15 44591344 44591372 -58903602 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 925 28 29 0 0 chr15 44591377 44591412 -58903562 + AT_rich Low_complexity Low_complexity 1 35 0 1 925 1082 128 0 11 chr15 44592394 44592576 -58902398 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 925 341 175 9 76 chr15 44592820 44592925 -58902049 - MTC-int LTR MaLR -1160 98 1 1 925 183 80 0 0 chr15 44593093 44593118 -58901856 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 925 338 180 160 7 chr15 44593178 44593265 -58901709 + B3 SINE B2 30 130 -86 1 925 29 28 0 0 chr15 44593285 44593321 -58901653 + AT_rich Low_complexity Low_complexity 1 36 0 1 925 211 240 211 13 chr15 44593392 44593468 -58901506 - PB1 SINE Alu -7 120 30 1 925 207 0 0 0 chr15 44593891 44593914 -58901060 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 925 22 35 0 0 chr15 44594390 44594419 -58900555 + AT_rich Low_complexity Low_complexity 1 29 0 1 925 479 292 58 0 chr15 44594799 44594936 -58900038 - ID_B1 SINE B4 -8 216 72 1 925 301 352 66 0 chr15 44595267 44595358 -58899616 + B4 SINE B4 145 241 -51 1 925 397 330 59 91 chr15 44596526 44596746 -58898228 - MER20 DNA MER1_type -3 216 4 1 925 204 44 89 0 chr15 44597963 44598008 -58896966 + (TTTTG)n Simple_repeat Simple_repeat 3 51 0 1 925 212 196 19 19 chr15 44598030 44598082 -58896892 + GA-rich Low_complexity Low_complexity 6 57 0 1 925 180 0 0 0 chr15 44598082 44598102 -58896872 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1 925 587 51 0 12 chr15 44598104 44598184 -58896790 + (GGA)n Simple_repeat Simple_repeat 1 79 0 1 925 31 44 0 0 chr15 44598939 44598984 -58895990 + AT_rich Low_complexity Low_complexity 1 45 0 1 925 9466 53 8 6 chr15 44600965 44602307 -58892667 - L1Md_F2 LINE L1 -3 6579 5244 1 925 194 62 31 0 chr15 44602307 44602339 -58892635 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 925 9466 67 25 1 chr15 44602339 44603007 -58891967 - L1Md_F2 LINE L1 -640 5243 4547 1 925 1197 69 0 0 chr15 44603014 44603174 -58891800 - L1_Mus1 LINE L1 0 6567 6408 1 925 351 0 0 0 chr15 44603249 44603288 -58891686 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 1 925 221 75 0 24 chr15 44603556 44603597 -58891377 + (TTTTTG)n Simple_repeat Simple_repeat 1 40 0 1 925 1156 82 0 0 chr15 44603597 44603744 -58891230 - B1_Mus1 SINE Alu -1 147 1 1 925 1309 105 5 5 chr15 44603788 44603979 -58890995 + B2_Mm2 SINE B2 2 192 -3 1 925 568 186 0 19 chr15 44604089 44604193 -58890781 + B1_Mur2 SINE Alu 1 102 -47 1 925 324 0 0 0 chr15 44604346 44604382 -58890592 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 925 21 0 0 0 chr15 44604534 44604555 -58890419 + AT_rich Low_complexity Low_complexity 1 21 0 1 925 189 26 79 0 chr15 44604727 44604765 -58890209 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 1 925 438 315 40 0 chr15 44605049 44605198 -58889776 + RSINE1 SINE B4 3 157 -8 1 925 623 239 15 7 chr15 44607118 44607253 -58887721 + B1_Mur1 SINE Alu 2 137 -12 1 925 198 0 0 0 chr15 44607253 44607275 -58887699 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 1 925 233 119 24 0 chr15 44608101 44608143 -58886831 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 1 925 25 51 0 0 chr15 44608593 44608632 -58886342 + AT_rich Low_complexity Low_complexity 1 39 0 1 925 203 114 0 22 chr15 44609007 44609052 -58885922 + (TTTTTG)n Simple_repeat Simple_repeat 4 47 0 1 925 1140 75 7 0 chr15 44609066 44609212 -58885762 - B1_Mus1 SINE Alu -1 147 1 1 925 7540 112 43 1 chr15 44609225 44611009 -58883965 - L1_Mus1 LINE L1 0 6567 4679 1 925 612 201 73 15 chr15 44612043 44612063 -58882911 - B1_Mus2 SINE Alu -2 145 117 1 925 180 0 0 0 chr15 44612063 44612083 -58882891 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 925 612 201 73 15 chr15 44612083 44612198 -58882776 - B1_Mus2 SINE Alu -31 116 3 1 925 289 183 28 46 chr15 44612395 44612504 -58882470 + (CAAA)n Simple_repeat Simple_repeat 2 108 0 1 925 284 247 43 12 chr15 44612520 44612628 -58882346 + Lx7 LINE L1 7596 7694 -2 1 925 3310 220 25 17 chr15 44612629 44613383 -58881591 - Lx9 LINE L1 -538 7106 6347 1 925 1870 193 120 16 chr15 44613380 44613865 -58881109 + Lx9 LINE L1 7106 7640 -4 1 925 27 81 0 0 chr15 44614406 44614468 -58880506 + AT_rich Low_complexity Low_complexity 1 62 0 1 925 29 70 0 0 chr15 44615082 44615139 -58879835 + AT_rich Low_complexity Low_complexity 1 57 0 1 925 22 35 0 0 chr15 44615145 44615174 -58879800 + AT_rich Low_complexity Low_complexity 1 29 0 1 925 255 236 106 11 chr15 44615905 44615999 -58878975 + MER113A DNA MER1_type 3 105 -209 1 925 1788 168 20 6 chr15 44616477 44616525 -58878449 + RLTR15 LTR ERVK 1 50 -309 1 925 207 0 0 0 chr15 44616525 44616548 -58878426 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 925 1788 168 20 6 chr15 44616548 44616853 -58878121 + RLTR15 LTR ERVK 51 358 -1 1 925 378 221 45 57 chr15 44617276 44617441 -58877533 - L1MD2 LINE L1 -17 6342 6201 1 925 399 390 19 0 chr15 44617741 44617900 -58877074 + RSINE1 SINE B4 2 163 -2 1 925 273 119 0 0 chr15 44617913 44617955 -58877019 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1 925 32681 41 37 30 chr15 44621227 44622744 -58872230 - L1Md_T LINE L1 0 6582 5010 1 925 239 320 65 52 chr15 44622744 44622899 -58872075 + RMER20A LTR ERVK 92 248 -268 1 925 32681 41 37 30 chr15 44622899 44626567 -58868407 - L1Md_T LINE L1 0 5009 1203 1 925 7537 68 0 17 chr15 44626533 44627616 -58867358 - L1Md_Gf LINE L1 -5380 1142 78 1 925 1229 110 38 11 chr15 44627680 44627864 -58867110 - B2_Mm2 SINE B2 -6 189 1 1 925 358 297 63 66 chr15 44627932 44628235 -58866739 - Lx9 LINE L1 -75 7569 7268 1 925 1456 274 37 3 chr15 44628395 44628746 -58866228 - MTEa LTR MaLR -16 363 1 1 925 357 252 0 9 chr15 44629318 44629430 -58865544 + Lx9 LINE L1 7527 7637 -7 1 925 199 392 0 73 chr15 44629473 44629583 -58865391 - L2c LINE L2 -20 3367 3266 1 925 227 320 204 33 chr15 44629641 44629945 -58865029 - L2c LINE L2 -731 2688 2333 1 925 358 146 170 40 chr15 44630514 44630525 -58864449 + Lx2 LINE L1 6877 6885 -112 1 925 987 9 0 0 chr15 44630525 44630637 -58864337 + (TC)n Simple_repeat Simple_repeat 2 113 0 1 925 297 0 0 0 chr15 44630637 44630669 -58864305 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 925 358 146 170 40 chr15 44630669 44630756 -58864218 + Lx2 LINE L1 6886 6988 -9 1 925 348 128 261 23 chr15 44630769 44630857 -58864117 - B1_Mur4 SINE Alu -6 144 36 1 925 22 56 0 0 chr15 44631467 44631503 -58863471 + AT_rich Low_complexity Low_complexity 1 36 0 1 925 269 116 125 42 chr15 44631523 44631595 -58863379 - Lx7 LINE L1 0 7696 7619 1 925 1363 206 28 69 chr15 44631693 44632125 -58862849 - Lx7 LINE L1 -87 7609 7196 1 925 245 260 9 65 chr15 44632465 44632572 -58862402 + (TATATG)n Simple_repeat Simple_repeat 1 101 0 1 925 396 299 47 47 chr15 44633207 44633379 -58861595 - MER58A DNA MER1_type -2 222 51 1 925 292 319 31 31 chr15 44633435 44633532 -58861442 - PB1D10 SINE Alu 0 117 21 1 925 207 0 0 0 chr15 44634431 44634454 -58860520 + (T)n Simple_repeat Simple_repeat 1 23 0 1 925 1337 287 75 25 chr15 44635039 44635855 -58859119 - Lx2B LINE L1 -1080 5920 5055 1 925 229 279 31 54 chr15 44636028 44636157 -58858817 - Lx8 LINE L1 -2 7471 7346 1 925 284 143 0 18 chr15 44637994 44638051 -58856923 + CT-rich Low_complexity Low_complexity 6 61 0 1 925 1456 149 86 147 chr15 44638094 44638503 -58856471 - ORR1C2 LTR MaLR 0 384 1 1 925 1064 134 35 0 chr15 44638951 44639123 -58855851 - B2_Mm1t SINE B2 -14 179 2 1 925 189 0 0 0 chr15 44639267 44639288 -58855686 + (A)n Simple_repeat Simple_repeat 1 21 0 1 925 182 250 46 15 chr15 44640126 44640191 -58854783 + MIRc SINE MIR 202 268 0 2 925 237 258 56 0 chr15 44640474 44640563 -58854411 - L1M5 LINE L1 -403 5837 5744 2 925 21 0 0 0 chr15 44640568 44640589 -58854385 + AT_rich Low_complexity Low_complexity 1 21 0 2 925 326 273 181 39 chr15 44640652 44640929 -58854045 - L1M5 LINE L1 -518 5646 5331 2 925 890 174 39 22 chr15 44641360 44641542 -58853432 + B2_Mm2 SINE B2 1 185 -10 2 925 21 0 0 0 chr15 44641561 44641582 -58853392 + AT_rich Low_complexity Low_complexity 1 21 0 2 925 678 283 92 5 chr15 44641591 44641797 -58853177 + ID_B1 SINE B4 1 224 0 2 925 21 57 0 0 chr15 44641800 44641835 -58853139 + AT_rich Low_complexity Low_complexity 1 35 0 2 925 225 0 0 0 chr15 44642777 44642802 -58852172 + (T)n Simple_repeat Simple_repeat 1 25 0 2 925 522 303 190 35 chr15 44643408 44643719 -58851255 + ORR1E LTR MaLR 1 359 0 2 925 3505 88 18 8 chr15 44643930 44644423 -58850551 + L1Md_F2 LINE L1 6084 6581 -1 2 925 233 180 197 0 chr15 44644525 44644586 -58850388 - MTD LTR MaLR -14 405 333 2 925 260 403 0 0 chr15 44645303 44645375 -58849599 - ID4_ SINE ID -11 72 1 2 925 249 33 0 0 chr15 44645442 44645472 -58849502 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 925 213 39 0 0 chr15 44645527 44645553 -58849421 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 925 21 0 0 0 chr15 44647266 44647287 -58847687 + AT_rich Low_complexity Low_complexity 1 21 0 2 925 396 0 0 0 chr15 44647638 44647682 -58847292 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 925 24 32 0 0 chr15 44648073 44648104 -58846870 + AT_rich Low_complexity Low_complexity 1 31 0 2 925 308 308 32 16 chr15 44649123 44649311 -58845663 - MER113 DNA MER1_type -30 491 301 2 925 1188 41 7 14 chr15 44650014 44650161 -58844813 - B1_Mm SINE Alu 0 147 2 2 925 209 33 33 0 chr15 44650862 44650892 -58844082 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 925 410 308 68 35 chr15 44650963 44651203 -58843771 - MTEa LTR MaLR -7 372 102 2 925 842 281 85 35 chr15 44651418 44651911 -58843063 - L1MB4 LINE L1 -41 6139 5622 2 925 227 381 52 21 chr15 44653001 44653194 -58841780 + MIRb SINE MIR 33 231 -37 2 925 596 314 78 57 chr15 44654051 44654385 -58840589 - ORR1E LTR MaLR -18 341 1 2 925 754 183 6 6 chr15 44656042 44656207 -58838767 + CT-rich Low_complexity Low_complexity 2 166 0 2 925 231 36 0 0 chr15 44656229 44656257 -58838717 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 2 925 270 306 156 8 chr15 44656576 44656703 -58838271 + MIRb SINE MIR 32 188 -80 2 925 312 27 0 0 chr15 44656787 44656824 -58838150 + (CAA)n Simple_repeat Simple_repeat 2 38 0 2 925 288 0 0 0 chr15 44657813 44657845 -58837129 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 925 1056 206 18 18 chr15 44657851 44658074 -58836900 + URR1B DNA MER1_type 3 225 0 2 925 184 314 53 97 chr15 44658716 44658829 -58836145 - L2a LINE L2 -17 3409 3302 2 925 22 56 0 0 chr15 44659450 44659486 -58835488 + AT_rich Low_complexity Low_complexity 1 36 0 2 925 1047 16 0 0 chr15 44659761 44659882 -58835092 + (CAAG)n Simple_repeat Simple_repeat 3 123 0 2 925 786 294 72 4 chr15 44659906 44660183 -58834791 - Lx7 LINE L1 -426 7270 6975 2 925 504 0 0 0 chr15 44660193 44660249 -58834725 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 925 23 0 0 0 chr15 44660295 44660318 -58834656 + AT_rich Low_complexity Low_complexity 1 23 0 2 925 684 163 0 0 chr15 44661193 44661322 -58833652 + GA-rich Low_complexity Low_complexity 1 129 0 2 925 215 197 188 43 chr15 44662149 44662218 -58832756 - MIRb SINE MIR -73 195 117 2 925 241 210 0 36 chr15 44663082 44663166 -58831808 + CT-rich Low_complexity Low_complexity 4 84 0 2 925 288 0 0 0 chr15 44663172 44663204 -58831770 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 2 925 359 254 131 22 chr15 44663204 44663341 -58831633 - RSINE1 SINE B4 -13 152 1 2 925 720 224 42 30 chr15 44664509 44664675 -58830299 - B3 SINE B2 -45 171 4 2 925 385 299 14 14 chr15 44667072 44667181 -58827793 + PB1D10 SINE Alu 6 114 -35 2 925 22 0 0 0 chr15 44667858 44667880 -58827094 + AT_rich Low_complexity Low_complexity 1 22 0 2 925 361 108 8 12 chr15 44668800 44668868 -58826106 + B1_Mus2 SINE Alu 71 137 -10 2 925 454 216 11 17 chr15 44668962 44669141 -58825833 + (TA)n Simple_repeat Simple_repeat 2 179 0 2 925 2131 266 44 16 chr15 44669156 44669843 -58825131 + Lx8 LINE L1 6233 6938 -535 2 925 295 315 19 52 chr15 44669869 44670080 -58824894 + Lx8 LINE L1 7268 7471 -2 2 925 221 356 85 8 chr15 44670714 44670844 -58824130 + MIRb SINE MIR 116 255 -13 2 925 417 279 93 0 chr15 44671137 44671266 -58823708 + B1_Mur1 SINE Alu 2 142 -7 2 925 376 332 131 25 chr15 44671543 44672000 -58822974 - L2a LINE L2 -172 3254 2747 2 925 1747 192 54 35 chr15 44672216 44672589 -58822385 + RLTR14 LTR ERV1 3 382 0 2 925 5264 99 4 17 chr15 44672693 44673526 -58821448 - L1_Mur2 LINE L1 -643 5234 4413 2 925 1640 220 74 3 chr15 44673684 44674022 -58820952 + MTD LTR MaLR 1 362 -57 2 925 6552 172 58 14 chr15 44675254 44675830 -58819144 - Lx5 LINE L1 -3 7047 6440 2 925 1035 25 0 0 chr15 44675830 44675952 -58819022 + (TC)n Simple_repeat Simple_repeat 1 122 0 2 925 6552 172 58 14 chr15 44675952 44676616 -58818358 - Lx5 LINE L1 -611 6439 5753 2 925 217 299 39 49 chr15 44677197 44677299 -58817675 - MIRb SINE MIR -88 180 80 2 925 23 0 0 53 chr15 44677889 44677908 -58817066 + AT_rich Low_complexity Low_complexity 1 18 0 2 925 1117 95 0 0 chr15 44677908 44678056 -58816918 + B1_Mus1 SINE Alu 1 148 0 2 925 23 0 0 53 chr15 44678056 44678074 -58816900 + AT_rich Low_complexity Low_complexity 1 18 0 2 925 301 28 0 0 chr15 44678657 44678693 -58816281 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 2 925 366 56 0 0 chr15 44678946 44679000 -58815974 - Lx9 LINE L1 -77 7567 7514 2 925 819 172 19 0 chr15 44679005 44679162 -58815812 - Lx9 LINE L1 -196 7448 7289 2 925 1341 53 0 0 chr15 44679262 44679432 -58815542 + (TCTCC)n Simple_repeat Simple_repeat 5 174 0 2 925 617 237 14 14 chr15 44679438 44679579 -58815395 - B1_Mur1 SINE Alu -7 142 2 2 925 25 83 0 0 chr15 44679674 44679734 -58815240 + AT_rich Low_complexity Low_complexity 1 60 0 2 925 4345 122 28 19 chr15 44680076 44680899 -58814075 - L1_Mus3 LINE L1 -5 6633 5736 2 925 381 43 0 0 chr15 44680946 44680993 -58813981 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 925 1750 173 61 61 chr15 44681012 44681388 -58813586 - ORR1C2 LTR MaLR -2 382 7 2 925 277 243 108 108 chr15 44681992 44682112 -58812862 - L2c LINE L2 0 3387 3268 2 925 1422 249 123 12 chr15 44682157 44682579 -58812395 + Lx6 LINE L1 6932 7400 -60 2 925 564 280 0 0 chr15 44684146 44684278 -58810696 - B1F SINE Alu -17 132 1 2 925 417 358 12 6 chr15 44685634 44685800 -58809174 + MER3 DNA MER1_type 43 209 0 2 925 195 69 0 0 chr15 44685925 44685954 -58809020 + (T)n Simple_repeat Simple_repeat 1 29 0 2 925 474 338 99 48 chr15 44686083 44686356 -58808618 - RMER15 LTR ERVL -14 561 275 2 925 648 294 144 32 chr15 44686797 44687138 -58807836 + MLT1B LTR MaLR 10 388 -2 2 925 26 0 0 0 chr15 44687430 44687456 -58807518 + AT_rich Low_complexity Low_complexity 1 26 0 2 925 441 0 0 0 chr15 44687456 44687505 -58807469 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 925 912 66 22 0 chr15 44687618 44687754 -58807220 - L1Md_F2 LINE L1 0 6582 6444 2 925 221 311 131 25 chr15 44688878 44689000 -58805974 - MIR3 SINE MIR -25 237 103 2 925 368 347 6 45 chr15 44689488 44689666 -58805308 + MLT1F2 LTR MaLR 33 203 -357 2 925 269 302 29 86 chr15 44689781 44689886 -58805088 + MLT1F2 LTR MaLR 443 541 -19 2 925 429 320 34 0 chr15 44690247 44690394 -58804580 - RSINE1 SINE B4 -3 162 11 2 925 286 307 56 56 chr15 44690470 44690632 -58804342 - MER5A DNA MER1_type -11 178 17 2 925 412 248 73 19 chr15 44690937 44691044 -58803930 - PB1D10 SINE Alu 0 127 3 2 925 375 268 38 8 chr15 44691392 44691542 -58803432 + L1MB5 LINE L1 5895 6048 -130 2 925 22 56 0 0 chr15 44692095 44692131 -58802843 + AT_rich Low_complexity Low_complexity 1 36 0 2 925 414 302 0 79 chr15 44692172 44692312 -58802662 - B4A SINE B4 -1 291 163 2 925 24 0 0 0 chr15 44692551 44692575 -58802399 + AT_rich Low_complexity Low_complexity 1 24 0 2 115 39456 7 0 1 chr15 44692604 44699387 -58795587 - L1Md_A LINE L1 0 6582 1 2 926 261 0 0 0 chr15 44699679 44699708 -58795266 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 926 205 244 0 0 chr15 44699820 44699865 -58795109 + (CTG)n Simple_repeat Simple_repeat 1 45 0 2 926 185 0 40 0 chr15 44699871 44699896 -58795078 + (ATG)n Simple_repeat Simple_repeat 1 26 0 2 926 240 48 0 0 chr15 44701193 44701235 -58793739 - Lx LINE L1 -2 6652 6611 2 926 394 390 25 50 chr15 44701248 44701526 -58793448 + MLT2F LTR ERVL 329 599 -64 2 926 2065 211 33 8 chr15 44701526 44702005 -58792969 + Lx2B LINE L1 6503 6993 -7 2 926 252 253 145 0 chr15 44702206 44702289 -58792685 + PB1D10 SINE Alu 23 117 0 2 926 243 61 0 0 chr15 44702707 44702740 -58792234 + (T)n Simple_repeat Simple_repeat 1 33 0 2 926 1204 48 0 14 chr15 44702740 44702888 -58792086 - B1_Mm SINE Alu 0 147 2 2 926 341 342 32 52 chr15 44703117 44703271 -58791703 + B4A SINE B4 2 152 -140 2 926 303 104 0 0 chr15 44703273 44703321 -58791653 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 926 413 329 101 65 chr15 44703551 44703996 -58790978 - L1ME3A LINE L1 -293 5880 5420 2 926 531 215 83 15 chr15 44704061 44704193 -58790781 - ID_B1 SINE B4 -5 219 79 3 926 680 209 89 30 chr15 44704214 44704416 -58790558 - B3 SINE B2 0 216 3 3 926 30 69 0 0 chr15 44704685 44704743 -58790231 + AT_rich Low_complexity Low_complexity 1 58 0 3 926 442 157 73 9 chr15 44704743 44704852 -58790122 - Lx5 LINE L1 -3 7047 6932 3 926 27 49 0 0 chr15 44704987 44705028 -58789946 + AT_rich Low_complexity Low_complexity 1 41 0 3 926 414 261 43 50 chr15 44705048 44705209 -58789765 - RSINE1 SINE B4 -2 163 4 3 926 459 0 0 0 chr15 44705227 44705278 -58789696 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 926 591 261 56 23 chr15 44705582 44705884 -58789090 - L1M4 LINE L1 -1036 5110 4799 3 926 241 319 43 0 chr15 44705979 44706048 -58788926 - ID4 SINE ID -9 74 3 3 926 320 316 60 97 chr15 44706086 44706113 -58788861 - L1M4 LINE L1 -1500 4643 4620 3 926 4516 26 6 4 chr15 44706113 44706647 -58788327 - L1Md_F2 LINE L1 0 6582 6048 3 926 512 277 78 77 chr15 44706647 44706917 -58788057 - L1M4 LINE L1 -1524 4619 4357 3 926 452 305 23 23 chr15 44706918 44707049 -58787925 - ID_B1 SINE B4 0 224 94 3 926 427 288 20 67 chr15 44707128 44707277 -58787697 - B1F1 SINE Alu -7 142 1 3 926 3100 178 7 0 chr15 44708096 44708652 -58786322 - Lx LINE L1 -1 6653 6094 3 926 6687 156 13 4 chr15 44708675 44709914 -58785060 - L1_Mm LINE L1 -3 5880 4631 3 926 5530 136 16 17 chr15 44709887 44711391 -58783583 - L1_Mur1 LINE L1 -4176 1710 209 3 926 375 274 17 17 chr15 44712242 44712357 -58782617 - PB1D10 SINE Alu -2 115 1 3 926 490 275 127 105 chr15 44717944 44718220 -58776754 - MLT2C1 LTR ERVL -40 357 76 3 926 2046 125 11 43 chr15 44718245 44718622 -58776352 - RMER16 LTR ERVK -83 450 1 3 926 17758 89 35 7 chr15 44718622 44721908 -58773066 - RMER16-int LTR ERVK 0 5406 2039 3 926 3677 42 0 7 chr15 44721908 44722363 -58772611 - L1Md_F2 LINE L1 0 6582 6131 3 926 6338 108 55 23 chr15 44722363 44722813 -58772161 - RMER16-int LTR ERVK -3373 2033 1566 3 926 779 227 48 132 chr15 44722932 44723242 -58771732 - RLTR45-int LTR ERVK -3660 3584 3301 3 926 722 308 34 4 chr15 44723256 44723491 -58771483 - RMER16-int LTR ERVK -1658 1656 1415 3 926 9896 113 30 13 chr15 44723623 44725134 -58769840 - RMER16-int LTR ERVK -3869 1537 1 3 926 846 124 51 0 chr15 44725134 44725271 -58769703 - RMER16 LTR ERVK 0 533 390 3 926 5260 67 0 1 chr15 44725300 44725963 -58769011 - L1_Mus1 LINE L1 0 6567 5906 3 926 543 214 76 8 chr15 44726641 44726759 -58768215 - B3 SINE B2 -88 128 3 3 926 853 320 13 0 chr15 44727224 44727458 -58767516 - MTEa LTR MaLR -142 237 1 3 926 250 272 38 28 chr15 44727512 44727618 -58767356 + L1MA5A LINE L1 6128 6234 -63 3 926 24 0 0 0 chr15 44728585 44728609 -58766365 + AT_rich Low_complexity Low_complexity 1 24 0 3 926 303 377 45 45 chr15 44729431 44729673 -58765301 - LTR16E1 LTR ERVL -7 531 290 3 926 38 0 0 0 chr15 44730464 44730502 -58764472 + AT_rich Low_complexity Low_complexity 1 38 0 3 926 21 36 0 0 chr15 44730613 44730641 -58764333 + AT_rich Low_complexity Low_complexity 1 28 0 3 926 248 253 114 0 chr15 44731296 44731375 -58763599 + MER106A DNA MER1_type 59 146 -90 3 926 22 35 0 0 chr15 44731407 44731436 -58763538 + AT_rich Low_complexity Low_complexity 1 29 0 3 926 1320 278 92 8 chr15 44731492 44731851 -58763123 + MTD LTR MaLR 8 396 -23 3 926 809 135 0 7 chr15 44731935 44732077 -58762897 - Lx2 LINE L1 0 6997 6857 3 926 244 313 30 0 chr15 44732248 44732315 -58762659 - MER5A DNA MER1_type -1 188 120 3 926 1003 101 0 0 chr15 44732489 44732627 -58762347 - B1_Mus1 SINE Alu -9 139 2 3 926 444 220 149 36 chr15 44733197 44733419 -58761555 - Lx7 LINE L1 -1459 6237 5991 3 926 403 343 11 32 chr15 44733484 44733671 -58761303 - Lx7 LINE L1 -1377 6319 6137 3 926 750 266 58 42 chr15 44733749 44734018 -58760956 - Lx7 LINE L1 -1711 5985 5713 3 926 2156 194 89 18 chr15 44734018 44734511 -58760463 - RLTR11A LTR ERVK 0 528 1 3 926 750 266 58 42 chr15 44734511 44734551 -58760423 - Lx7 LINE L1 -1984 5712 5672 3 926 805 320 142 46 chr15 44734528 44735229 -58759745 + Lx8 LINE L1 6697 7464 -9 3 926 389 281 66 66 chr15 44736024 44736298 -58758676 + ETnERV3-int LTR ERVK 50 323 -2991 3 926 378 0 0 0 chr15 44736352 44736394 -58758580 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 926 402 21 0 0 chr15 44736394 44736440 -58758534 + (GA)n Simple_repeat Simple_repeat 1 47 0 3 926 6105 169 66 59 chr15 44736448 44738498 -58756476 + ETnERV3-int LTR ERVK 340 3474 -3932 3 926 7398 175 14 22 chr15 44738498 44739186 -58755788 + ETnERV3-int LTR ERVK 4397 5071 -737 3 926 1125 86 6 22 chr15 44739186 44739364 -58755610 + L1Md_F3 LINE L1 6410 6584 0 3 926 7398 175 14 22 chr15 44739364 44740067 -58754907 + ETnERV3-int LTR ERVK 5072 5777 -31 3 926 5327 102 17 17 chr15 44740082 44740888 -58754086 + RLTR13D1 LTR ERVK 1 806 0 3 926 4162 49 60 8 chr15 44741451 44741983 -58752991 + LTRIS2 LTR ERV1 5 564 0 3 926 3320 97 16 12 chr15 44742035 44742528 -58752446 - L1_Mus3 LINE L1 -3 6635 6141 3 926 1038 72 0 0 chr15 44742528 44742667 -58752307 + L1_Mus3 LINE L1 5991 6129 -509 3 926 1140 193 9 9 chr15 44743264 44743484 -58751490 - URR1B DNA MER1_type -1 224 5 3 926 405 281 0 0 chr15 44743987 44744076 -58750898 - B4A SINE B4 -47 245 157 3 926 291 257 0 51 chr15 44744098 44744176 -58750798 - B4 SINE B4 -210 82 9 3 926 192 97 0 0 chr15 44744387 44744418 -58750556 + (A)n Simple_repeat Simple_repeat 1 31 0 3 926 917 111 0 53 chr15 44744464 44744616 -58750358 + B2_Mm2 SINE B2 1 144 -51 3 926 1173 270 14 29 chr15 44744618 44745038 -58749936 + L1_Rod LINE L1 2981 3394 -2453 3 926 586 201 117 0 chr15 44745377 44745591 -58749383 + Lx9 LINE L1 7405 7643 -1 3 926 1551 57 0 9 chr15 44747311 44747523 -58747451 - L1Md_F2 LINE L1 0 6582 6373 3 926 273 287 69 0 chr15 44748484 44748571 -58746403 + B4 SINE B4 1 93 -199 3 926 236 224 20 0 chr15 44749168 44749217 -58745757 - PB1D10 SINE Alu -56 61 12 3 926 310 325 46 61 chr15 44749210 44749341 -58745633 - MLT1E1 LTR MaLR -54 600 472 3 926 200 306 48 7 chr15 44749964 44750109 -58744865 + T-rich Low_complexity Low_complexity 2 152 0 3 926 234 91 0 0 chr15 44750155 44750188 -58744786 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 926 315 0 0 0 chr15 44750189 44750224 -58744750 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 926 1021 174 45 0 chr15 44750868 44751046 -58743928 - Lx4B LINE L1 -366 6692 6507 3 926 4270 243 112 23 chr15 44751381 44751898 -58743076 + Lx6 LINE L1 6163 6751 -709 3 926 180 0 0 0 chr15 44751898 44751918 -58743056 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 926 831 48 0 0 chr15 44751918 44752021 -58742953 + (GA)n Simple_repeat Simple_repeat 1 104 0 3 926 677 73 0 10 chr15 44752022 44752119 -58742855 + (GAA)n Simple_repeat Simple_repeat 2 97 0 3 926 4270 243 112 23 chr15 44752119 44752781 -58742193 + Lx6 LINE L1 6752 7450 -10 3 926 1157 97 4 4 chr15 44753375 44753646 -58741328 + (TTTC)n Simple_repeat Simple_repeat 1 271 0 3 926 3292 122 2 2 chr15 44753690 44754173 -58740801 - L1_Mus2 LINE L1 0 6566 6084 3 926 975 164 180 0 chr15 44754231 44754420 -58740554 + URR1A DNA MER1_type 1 223 -3 3 926 276 223 62 80 chr15 44756510 44756622 -58738352 + Lx8 LINE L1 6263 6372 -1101 3 926 1260 27 0 0 chr15 44756638 44756785 -58738189 - B1_Mm SINE Alu 0 147 1 3 926 1499 228 61 37 chr15 44756787 44757165 -58737809 - RMER13A LTR ERVK -473 387 1 3 926 2245 237 49 27 chr15 44757856 44758002 -58736972 + RMER15 LTR ERVL 14 158 -417 3 926 4102 61 6 15 chr15 44758002 44758548 -58736426 + L1_Mus2 LINE L1 6026 6566 0 3 926 2245 237 49 27 chr15 44758548 44758951 -58736023 + RMER15 LTR ERVL 159 575 0 3 926 325 406 105 28 chr15 44759200 44759590 -58735384 + MLT1L LTR MaLR 6 425 -185 3 926 203 250 31 0 chr15 44759694 44759758 -58735216 + T-rich Low_complexity Low_complexity 2 67 0 3 926 441 50 0 0 chr15 44760267 44760327 -58734647 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 926 23 0 0 0 chr15 44760461 44760484 -58734490 + AT_rich Low_complexity Low_complexity 1 23 0 3 926 234 195 0 0 chr15 44762247 44762288 -58732686 - L2a LINE L2 -44 3382 3342 3 926 542 339 90 11 chr15 44762507 44762695 -58732279 + B4 SINE B4 87 289 -3 3 926 1743 232 39 34 chr15 44762975 44763390 -58731584 + MTD LTR MaLR 1 417 -2 3 926 460 303 75 25 chr15 44764203 44764443 -58730531 - L1ME2 LINE L1 -73 6091 5840 3 926 804 347 82 51 chr15 44764641 44765272 -58729702 + RMER13A LTR ERVK 113 763 -97 3 926 1978 100 63 0 chr15 44765563 44765864 -58729110 - ORR1A2 LTR MaLR -7 320 1 3 926 225 139 0 0 chr15 44766155 44766198 -58728776 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 926 388 452 63 14 chr15 44767067 44767417 -58727557 + LTR16B LTR ERVL 2 368 -95 3 926 318 331 27 27 chr15 44769227 44769373 -58725601 + LTR16B2 LTR ERVL 31 176 -286 3 926 346 125 0 0 chr15 44769750 44769798 -58725176 - HAL1-3A_ME LINE L1 -835 2023 1976 3 926 482 331 95 29 chr15 44769819 44770093 -58724881 - B4A SINE B4 0 292 1 3 926 200 205 0 0 chr15 44770140 44770179 -58724795 + (CAAA)n Simple_repeat Simple_repeat 3 41 0 3 926 17682 143 11 38 chr15 44770255 44772087 -58722887 + Lx LINE L1 549 2385 -3501 3 926 405 36 73 0 chr15 44772087 44772142 -58722832 + U6 snRNA snRNA 1 59 -48 3 926 1454 85 0 41 chr15 44772151 44772372 -58722602 + L1Md_F2 LINE L1 6359 6570 -12 3 926 17682 172 11 65 chr15 44772372 44772813 -58722161 + Lx LINE L1 2397 2805 -3081 3 926 399 41 0 0 chr15 44772813 44772862 -58722112 + (CAAAA)n Simple_repeat Simple_repeat 5 53 0 3 926 17682 172 11 65 chr15 44772862 44775121 -58719853 + Lx LINE L1 2806 4944 -942 3 926 7311 39 1 2 chr15 44775113 44775996 -58718978 - L1Md_F2 LINE L1 -2 6580 5699 3 926 10519 65 1 1 chr15 44775995 44777353 -58717621 + L1_Mm LINE L1 4215 5572 -311 3 926 6112 159 12 2 chr15 44777345 44779052 -58715922 + Lx LINE L1 4924 6641 -13 3 926 21 0 0 0 chr15 44779788 44779809 -58715165 + AT_rich Low_complexity Low_complexity 1 21 0 3 926 799 268 20 8 chr15 44779934 44780179 -58714795 + RMER1B Other Other 36 283 -783 3 926 2200 114 9 3 chr15 44780186 44780503 -58714471 - ORR1A2 LTR MaLR -8 319 1 3 926 815 291 51 111 chr15 44780508 44780904 -58714070 + RMER1A Other Other 43 476 -590 3 926 4995 163 24 60 chr15 44780917 44781066 -58713908 + RMER13B LTR ERVK 1 118 -790 3 926 8019 38 0 1 chr15 44781066 44781996 -58712978 - RLTR13B3 LTR ERVK 0 929 1 3 926 4995 163 24 60 chr15 44781996 44782788 -58712186 + RMER13B LTR ERVK 119 908 0 3 926 442 274 288 15 chr15 44782788 44783052 -58711922 + RMER1A Other Other 109 444 -586 3 926 2316 208 177 16 chr15 44783034 44783654 -58711320 + RMER1A Other Other 296 1015 -15 4 926 24228 89 95 4 chr15 44783663 44784452 -58710522 - L1Md_F2 LINE L1 -292 5591 4791 4 926 7195 81 9 1 chr15 44784452 44785345 -58709629 + L1Md_F2 LINE L1 5603 6497 -85 4 926 225 0 0 0 chr15 44785345 44785370 -58709604 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 926 7195 81 9 1 chr15 44785370 44785445 -58709529 + L1Md_F2 LINE L1 6498 6577 -5 4 926 24228 89 95 4 chr15 44785445 44785586 -58709388 - L1Md_F LINE L1 -1093 4790 4373 4 926 4194 122 1 24 chr15 44785586 44786249 -58708725 - L1Md_F2 LINE L1 0 6582 5935 4 926 24228 99 89 3 chr15 44786249 44790127 -58704847 - L1Md_F LINE L1 -1511 4372 364 4 926 5058 49 0 0 chr15 44791062 44791676 -58703298 + L1Md_F2 LINE L1 5957 6570 -12 4 926 20608 157 75 15 chr15 44792218 44794885 -58700089 - Lx LINE L1 -6 6648 3837 4 926 770 0 11 0 chr15 44794885 44794975 -58699999 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 4 926 20608 178 38 14 chr15 44794975 44796669 -58698305 - Lx LINE L1 -2050 3836 2090 4 926 192 40 0 0 chr15 44796669 44796694 -58698280 + (TTG)n Simple_repeat Simple_repeat 2 26 0 4 926 20608 173 49 32 chr15 44796694 44798385 -58696589 - Lx LINE L1 -3797 2089 366 4 926 25 65 0 0 chr15 44798603 44798649 -58696325 + AT_rich Low_complexity Low_complexity 1 46 0 4 926 5130 157 68 9 chr15 44799571 44799595 -58695379 - Lx4A LINE L1 0 7058 7035 4 926 189 0 0 0 chr15 44799595 44799616 -58695358 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 4 926 5130 157 68 9 chr15 44799616 44800569 -58694405 - Lx4A LINE L1 -24 7034 6023 4 926 4178 146 101 8 chr15 44800574 44800804 -58694170 - L1_Mur2 LINE L1 -2491 3386 3122 4 926 1131 61 0 0 chr15 44800804 44800952 -58694022 + (TTC)n Simple_repeat Simple_repeat 3 150 0 4 926 4178 146 101 8 chr15 44800952 44801015 -58693959 - L1_Mur2 LINE L1 -2756 3121 3019 4 926 3301 41 5 0 chr15 44801015 44801409 -58693565 + MTA_Mm LTR MaLR 1 396 0 4 926 4178 146 101 8 chr15 44801409 44801972 -58693002 - L1_Mur2 LINE L1 -2859 3018 2449 4 926 5615 202 24 8 chr15 44801982 44803156 -58691818 - Lx3C LINE L1 -2 6974 5783 4 926 189 0 0 0 chr15 44803746 44803767 -58691207 + (G)n Simple_repeat Simple_repeat 1 21 0 4 926 3193 168 29 9 chr15 44803831 44804461 -58690513 - L1VL4 LINE L1 -80 5806 5165 4 926 7854 160 16 9 chr15 44804459 44806341 -58688633 - L1VL4 LINE L1 -3169 2717 817 4 926 6489 120 51 9 chr15 44806724 44807116 -58687858 - L1_Mur2 LINE L1 -3414 2463 2070 4 926 411 21 0 0 chr15 44807116 44807164 -58687810 + (TTG)n Simple_repeat Simple_repeat 1 48 0 4 926 6489 120 51 9 chr15 44807164 44807176 -58687798 - L1_Mur2 LINE L1 -3808 2069 2051 4 926 252 0 0 0 chr15 44807176 44807204 -58687770 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 926 6489 121 46 8 chr15 44807204 44808103 -58686871 - L1_Mur2 LINE L1 -3827 2050 1108 4 926 36202 31 1 0 chr15 44808099 44814286 -58680688 - L1Md_T LINE L1 -1 6584 298 4 926 2629 157 5 2 chr15 44814293 44814741 -58680233 - L1_Mur2 LINE L1 -5973 1113 665 4 926 486 0 0 0 chr15 44814763 44814817 -58680157 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 926 22 35 0 0 chr15 44815322 44815351 -58679623 + AT_rich Low_complexity Low_complexity 1 29 0 4 926 573 15 0 0 chr15 44816495 44816561 -58678413 + (TTTC)n Simple_repeat Simple_repeat 2 67 0 4 926 5245 59 1 4 chr15 44816571 44817248 -58677726 - L1Md_F2 LINE L1 -1 6581 5907 4 926 28071 91 2 15 chr15 44817248 44822421 -58672553 - L1Md_F2 LINE L1 -659 5224 135 4 926 354 386 104 4 chr15 44823273 44823533 -58671441 - MLT1E1A LTR MaLR -73 607 322 4 926 1038 257 108 22 chr15 44824813 44825091 -58669883 + MTD LTR MaLR 1 302 -117 4 926 277 170 0 0 chr15 44825117 44825164 -58669810 + MTD LTR MaLR 365 411 -8 4 926 1347 278 38 9 chr15 44825990 44826331 -58668643 + ORR1E LTR MaLR 1 351 -8 4 115 430 319 59 27 chr15 44826516 44826703 -58668271 - MER58A DNA MER1_type -4 220 28 4 927 886 144 0 35 chr15 44827319 44827463 -58667511 - B2_Mm2 SINE B2 -56 139 1 4 927 719 309 6 0 chr15 44828259 44828437 -58666537 - B4 SINE B4 -10 282 104 4 927 405 0 0 0 chr15 44828454 44828499 -58666475 + (TC)n Simple_repeat Simple_repeat 2 46 0 4 927 2014 186 11 0 chr15 44828574 44828928 -58666046 - Lx5 LINE L1 -213 6837 6480 4 927 4572 197 54 20 chr15 44828928 44830000 -58664974 - Lx5 LINE L1 -230 6820 5712 4 927 1425 173 4 0 chr15 44829999 44830236 -58664738 + Lx5 LINE L1 5458 5695 -182 4 927 208 135 0 0 chr15 44830707 44830744 -58664230 + (TTTTTA)n Simple_repeat Simple_repeat 2 38 0 4 927 186 398 24 0 chr15 44831205 44831328 -58663646 - L2a LINE L2 -268 3158 3033 4 927 930 187 131 0 chr15 44831329 44831478 -58663496 - URR1B DNA MER1_type -1 224 65 4 927 5256 150 72 9 chr15 44831478 44832379 -58662595 + RMER17B LTR ERVK 1 958 0 4 927 930 187 131 0 chr15 44832379 44832427 -58662547 - URR1B DNA MER1_type -161 64 2 4 927 612 322 13 0 chr15 44832620 44832772 -58662202 + RSINE1 SINE B4 12 165 0 4 927 3164 234 61 14 chr15 44833956 44834810 -58660164 + L1VL4 LINE L1 1 894 -5408 4 927 32583 73 2 5 chr15 44834811 44840040 -58654934 + L1Md_F2 LINE L1 281 5588 -298 4 927 8020 50 3 0 chr15 44840041 44841034 -58653940 + L1Md_F2 LINE L1 5590 6585 0 4 927 16122 158 193 5 chr15 44841034 44844535 -58650439 + L1_Mm LINE L1 1235 5393 -490 4 927 4366 118 9 5 chr15 44844535 44845197 -58649777 + L1_Mus4 LINE L1 5967 6631 -5 4 927 766 214 70 18 chr15 44845587 44845758 -58649216 - ORR1D1 LTR MaLR -192 182 3 4 927 5070 234 49 26 chr15 44845762 44847099 -58647875 - ORR1D1-int LTR MaLR -2 1368 1 4 927 1308 224 97 9 chr15 44847101 44847443 -58647531 - ORR1D1 LTR MaLR -2 372 1 4 927 1480 296 5 36 chr15 44847660 44848101 -58646873 + Lx9 LINE L1 6765 7191 -453 4 927 22 0 0 0 chr15 44848196 44848218 -58646756 + AT_rich Low_complexity Low_complexity 1 22 0 4 927 648 301 53 9 chr15 44848301 44848529 -58646445 + MLT1I LTR MaLR 9 246 -165 4 927 248 91 23 0 chr15 44849006 44849050 -58645924 + (TTTG)n Simple_repeat Simple_repeat 1 45 0 4 927 837 64 0 0 chr15 44849051 44849160 -58645814 - B1_Mus1 SINE Alu -2 146 38 4 927 261 0 0 0 chr15 44850503 44850532 -58644442 + (CAA)n Simple_repeat Simple_repeat 2 30 0 4 927 619 332 82 36 chr15 44850598 44850904 -58644070 + MER77 LTR ERVL 52 371 -236 4 927 1274 223 224 6 chr15 44850905 44851247 -58643727 + MTC LTR MaLR 6 421 0 4 927 926 265 39 58 chr15 44851258 44851622 -58643352 - ORR1E LTR MaLR -2 357 1 4 927 611 300 29 10 chr15 44851622 44851831 -58643143 + MER77 LTR ERVL 395 607 0 4 927 531 0 0 0 chr15 44851927 44851986 -58642988 + (CAAG)n Simple_repeat Simple_repeat 1 59 0 4 927 451 299 61 36 chr15 44852413 44852609 -58642365 + B3 SINE B2 1 193 -5 4 927 460 343 73 102 chr15 44854034 44854593 -58640381 - MLT1E2 LTR MaLR 0 627 85 4 927 265 281 85 34 chr15 44854956 44855074 -58639900 + MER45R DNA Tip100 112 235 -1346 4 927 353 352 92 14 chr15 44855331 44855613 -58639361 + MER45R DNA Tip100 523 826 -755 4 927 1211 287 22 38 chr15 44855639 44856056 -58638918 + L1_Mur3 LINE L1 340 749 -6979 4 927 4212 194 93 4 chr15 44856061 44856879 -58638095 + RMER19B LTR ERVK 12 902 0 4 927 3958 215 68 13 chr15 44856879 44857982 -58636992 + L1_Mur3 LINE L1 2318 3481 -2399 4 927 180 0 0 0 chr15 44858002 44858022 -58636952 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 927 1426 218 13 3 chr15 44858037 44858350 -58636624 - Lx7 LINE L1 -1730 5966 5651 4 927 4098 252 27 50 chr15 44858350 44859539 -58635435 + Lx7 LINE L1 6527 7687 -9 4 927 257 288 131 34 chr15 44859566 44859803 -58635171 + MER45R DNA Tip100 834 1093 -488 4 927 2794 226 133 21 chr15 44859821 44860765 -58634209 - Lx5 LINE L1 -2 7048 5999 4 927 22 0 0 0 chr15 44860786 44860808 -58634166 + AT_rich Low_complexity Low_complexity 1 22 0 4 927 27 29 0 0 chr15 44860870 44860904 -58634070 + AT_rich Low_complexity Low_complexity 1 34 0 4 927 7413 111 17 19 chr15 44860931 44862535 -58632439 + Lx LINE L1 5051 6654 0 4 927 4309 91 5 5 chr15 44862555 44863139 -58631835 + MT2B2 LTR ERVL 1 584 0 4 927 1069 306 47 29 chr15 44863205 44863795 -58631179 + L1MA5 LINE L1 5381 5969 -1675 4 927 342 332 42 71 chr15 44864077 44864317 -58630657 + L1MA5 LINE L1 6083 6315 -1158 4 927 715 198 220 0 chr15 44864367 44864544 -58630430 - B3 SINE B2 0 216 1 4 927 950 78 0 30 chr15 44866001 44866133 -58628841 + B1_Mus1 SINE Alu 20 147 -1 4 927 6973 83 2 4 chr15 44866255 44867492 -58627482 + L1Md_F LINE L1 357 1595 -4288 4 927 2911 55 0 0 chr15 44867492 44867858 -58627116 + L1Md_F2 LINE L1 6205 6570 -12 4 927 12970 84 3 2 chr15 44867865 44869679 -58625295 + L1Md_F LINE L1 2156 3972 -1911 4 927 456 33 0 0 chr15 44869686 44869747 -58625227 - L1_Mm LINE L1 -3727 2156 2096 4 927 5171 55 0 2 chr15 44869747 44870382 -58624592 + L1Md_F2 LINE L1 5935 6568 -14 4 927 642 60 0 0 chr15 44870406 44870489 -58624485 + (GGAA)n Simple_repeat Simple_repeat 3 85 0 4 927 424 274 0 10 chr15 44870526 44870622 -58624352 - B1_Mur1 SINE Alu -33 116 22 4 927 24 0 0 0 chr15 44871667 44871691 -58623283 + AT_rich Low_complexity Low_complexity 1 24 0 4 927 1320 181 98 4 chr15 44871696 44871962 -58623012 + ORR1B2 LTR MaLR 21 311 -56 4 927 4896 133 13 22 chr15 44871998 44872783 -58622191 + Lx LINE L1 5869 6646 -8 4 927 297 185 0 0 chr15 44872808 44872862 -58622112 + ORR1B2 LTR MaLR 312 365 -2 4 927 512 280 143 0 chr15 44872874 44873063 -58621911 - B3 SINE B2 0 216 1 4 927 1996 190 28 95 chr15 44873943 44874448 -58620526 - RMER19C LTR ERVK 0 611 141 4 927 528 300 0 52 chr15 44874706 44874865 -58620109 - B1F SINE Alu 0 149 1 4 927 2517 238 162 50 chr15 44875205 44875923 -58619051 + Lx6 LINE L1 6230 7039 -421 4 927 1783 132 83 74 chr15 44875923 44876249 -58618725 - ORR1A4 LTR MaLR 0 329 1 4 927 2517 252 59 87 chr15 44876249 44876418 -58618556 + Lx6 LINE L1 7040 7176 -284 4 927 1066 95 0 7 chr15 44876418 44876566 -58618408 - B1_Mus2 SINE Alu 0 147 1 4 927 2517 252 59 87 chr15 44876566 44876840 -58618134 + Lx6 LINE L1 7177 7460 0 4 927 406 200 44 0 chr15 44876994 44877013 -58617961 - B1_Mm SINE Alu -31 116 94 4 927 1124 109 6 0 chr15 44877013 44877188 -58617786 + (TTC)n Simple_repeat Simple_repeat 1 176 0 4 927 406 200 44 0 chr15 44877188 44877258 -58617716 - B1_Mm SINE Alu -54 93 24 4 927 225 315 18 9 chr15 44878134 44878243 -58616731 + Lx9 LINE L1 7352 7461 -183 4 927 399 183 0 0 chr15 44878243 44878325 -58616649 + (CA)n Simple_repeat Simple_repeat 1 82 0 4 927 382 319 69 74 chr15 44879172 44879375 -58615599 - RMER2 LTR ERV1 -28 539 338 4 927 378 33 33 16 chr15 44880251 44880312 -58614662 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 927 432 0 0 0 chr15 44880312 44880359 -58614615 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 927 198 0 0 0 chr15 44881171 44881193 -58613781 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 927 309 51 0 0 chr15 44881214 44881253 -58613721 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 927 21 0 0 0 chr15 44881768 44881789 -58613185 + AT_rich Low_complexity Low_complexity 1 21 0 4 927 236 203 0 63 chr15 44882751 44882814 -58612160 + L1MA9 LINE L1 6028 6086 -226 4 927 183 67 0 82 chr15 44882917 44882966 -58612008 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 4 927 2990 165 12 37 chr15 44883615 44884206 -58610768 + Lx5 LINE L1 5690 6265 -785 4 927 2966 76 0 49 chr15 44885098 44885526 -58609448 - L1_Mus2 LINE L1 0 6566 6160 4 927 442 300 137 15 chr15 44885531 44885866 -58609108 - Charlie1 DNA MER1_type -34 2747 2372 4 927 385 276 63 48 chr15 44886008 44886214 -58608760 - Charlie1 DNA MER1_type -629 2152 1944 4 927 461 45 0 29 chr15 44888230 44888299 -58606675 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 4 927 1075 80 0 0 chr15 44888299 44888437 -58606537 - B1_Mus1 SINE Alu -10 138 1 5 927 30 45 0 0 chr15 44888444 44888488 -58606486 + AT_rich Low_complexity Low_complexity 1 44 0 5 927 22 56 0 0 chr15 44889096 44889132 -58605842 + AT_rich Low_complexity Low_complexity 1 36 0 5 927 225 270 116 87 chr15 44889181 44889319 -58605655 - MTEa LTR MaLR -117 262 121 5 927 509 58 35 0 chr15 44889870 44889957 -58605017 - L1_Mus1 LINE L1 -4 6563 6474 5 927 2730 171 118 60 chr15 44890045 44890697 -58604277 - RMER6C LTR ERVK 0 690 1 5 927 348 274 154 21 chr15 44891631 44891911 -58603063 + L1MA8 LINE L1 4953 5269 -874 5 927 524 330 45 14 chr15 44892050 44892339 -58602635 + L1MA8 LINE L1 5827 6124 -167 5 927 913 181 3 214 chr15 44892629 44892795 -58602179 - RLTR23 LTR ERV1 -191 239 112 5 927 2066 130 12 58 chr15 44892795 44893138 -58601836 - ORR1A2 LTR MaLR 0 327 1 5 927 913 181 3 214 chr15 44893138 44893274 -58601700 - RLTR23 LTR ERV1 -319 111 1 5 927 541 357 97 0 chr15 44893480 44893707 -58601267 + MTEb LTR MaLR 21 269 -110 5 927 327 328 59 35 chr15 44893841 44893980 -58600994 + L1MEe LINE L1 893 1032 -3822 5 927 3178 124 42 51 chr15 44893980 44894549 -58600425 + LTRIS2 LTR ERV1 1 564 0 5 927 327 328 59 35 chr15 44894549 44894611 -58600363 + L1MEe LINE L1 1033 1099 -3755 5 927 192 77 0 0 chr15 44894648 44894674 -58600300 + (A)n Simple_repeat Simple_repeat 1 26 0 5 927 2036 212 62 59 chr15 44894938 44895080 -58599894 - RLTR20B3 LTR ERVK -13 564 414 5 927 639 265 130 41 chr15 44895080 44895418 -58599556 + RLTR9A LTR ERVK 1 368 0 5 927 2036 212 62 59 chr15 44895418 44895837 -58599137 - RLTR20B3 LTR ERVK -164 413 1 5 927 3502 189 24 20 chr15 44895837 44896577 -58598397 - MYSERV16_I-int LTR ERVK 0 2326 1584 5 927 725 152 54 12 chr15 44896575 44896741 -58598233 - MYSERV16_I-int LTR ERVK -1112 1214 1042 5 927 8890 115 24 5 chr15 44896745 44898754 -58596220 + Lx3A LINE L1 4939 6980 -1 5 927 362 127 0 14 chr15 44898767 44898839 -58596135 + (GGAA)n Simple_repeat Simple_repeat 3 73 0 5 927 420 154 0 0 chr15 44899035 44899100 -58595874 - RLTR23 LTR ERV1 -1 429 365 5 927 207 0 0 0 chr15 44899181 44899204 -58595770 + (T)n Simple_repeat Simple_repeat 1 23 0 5 927 4974 164 20 11 chr15 44899234 44900124 -58594850 - Lx2 LINE L1 0 6997 6100 5 927 1487 203 5 76 chr15 44900144 44900527 -58594447 - RLTR20B3 LTR ERVK -221 356 1 5 927 261 360 18 9 chr15 44901005 44901117 -58593857 - PB1D10 SINE Alu 0 117 5 5 927 938 37 7 22 chr15 44901706 44901844 -58593130 + (TTC)n Simple_repeat Simple_repeat 3 138 0 5 927 27 29 0 0 chr15 44901857 44901891 -58593083 + AT_rich Low_complexity Low_complexity 1 34 0 5 927 423 319 14 7 chr15 44901891 44902030 -58592944 - B1F SINE Alu -9 140 1 5 927 603 317 138 23 chr15 44902330 44902679 -58592295 - MT2A LTR ERVL 0 533 145 5 927 443 303 110 16 chr15 44902615 44902806 -58592168 - MTEa LTR MaLR -159 220 12 5 927 1281 225 136 68 chr15 44903732 44904102 -58590872 - MTD LTR MaLR 0 419 20 5 927 207 0 0 0 chr15 44904102 44904125 -58590849 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 927 1281 225 136 68 chr15 44904125 44904136 -58590838 - MTD LTR MaLR -400 19 12 5 927 250 59 27 68 chr15 44904138 44904183 -58590791 + A-rich Low_complexity Low_complexity 2 43 0 5 927 342 0 0 0 chr15 44904183 44904221 -58590753 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 5 927 250 59 27 68 chr15 44904221 44904248 -58590726 + A-rich Low_complexity Low_complexity 44 71 0 5 927 1058 97 14 0 chr15 44904807 44904952 -58590022 + B1_Mus2 SINE Alu 1 147 0 5 927 363 78 0 0 chr15 44904952 44905003 -58589971 + (TAAAA)n Simple_repeat Simple_repeat 4 54 0 5 927 1445 185 107 7 chr15 44905067 44905356 -58589618 - MTC LTR MaLR 0 421 104 5 927 1402 159 99 43 chr15 44905380 44905662 -58589312 - Lx2B LINE L1 -2 6998 6701 5 927 523 155 0 0 chr15 44905663 44905747 -58589227 - MTC LTR MaLR -333 88 5 5 927 288 346 100 6 chr15 44906310 44906470 -58588504 - L1MD2 LINE L1 -6008 539 365 5 927 183 42 0 0 chr15 44906709 44906733 -58588241 + (TC)n Simple_repeat Simple_repeat 1 24 0 5 927 461 235 49 0 chr15 44906734 44906836 -58588138 - PB1D9 SINE Alu -12 108 2 5 927 240 143 0 0 chr15 44907183 44907239 -58587735 + (T)n Simple_repeat Simple_repeat 1 56 0 5 927 1174 62 0 0 chr15 44907242 44907388 -58587586 - B1_Mm SINE Alu 0 147 2 5 927 259 284 95 0 chr15 44907413 44907487 -58587487 + ID2 SINE ID 2 82 -1 5 927 548 239 20 60 chr15 44907505 44907656 -58587318 + B1_Mur1 SINE Alu 5 149 0 5 927 243 221 10 31 chr15 44908484 44908582 -58586392 + CT-rich Low_complexity Low_complexity 4 99 0 5 927 511 331 47 16 chr15 44908605 44908795 -58586179 + ORR1E LTR MaLR 1 196 -163 5 927 6660 84 14 46 chr15 44908811 44909414 -58585560 + L1_Mur1 LINE L1 3633 4210 -1676 5 927 892 271 69 50 chr15 44909414 44909775 -58585199 + RLTR9A LTR ERVK 1 368 0 5 927 6660 84 14 46 chr15 44909775 44910236 -58584738 + L1_Mur1 LINE L1 4211 4663 -1223 5 927 3405 77 44 36 chr15 44910238 44910546 -58584428 - L1_Mus2 LINE L1 0 6566 6272 5 927 804 30 0 0 chr15 44910546 44910645 -58584329 + (TTC)n Simple_repeat Simple_repeat 2 100 0 5 927 1030 96 0 0 chr15 44910645 44910781 -58584193 - B1_Mus1 SINE Alu -12 136 1 5 927 3405 77 44 36 chr15 44910781 44910996 -58583978 - L1_Mus2 LINE L1 -295 6271 6039 5 927 1221 80 12 0 chr15 44910997 44911159 -58583815 - L1_Mur1 LINE L1 -357 5529 5366 5 927 26 30 0 0 chr15 44911350 44911383 -58583591 + AT_rich Low_complexity Low_complexity 1 33 0 5 927 267 303 73 36 chr15 44912287 44912424 -58582550 - L2a LINE L2 -20 3406 3265 5 927 196 378 23 47 chr15 44912587 44912673 -58582301 - L2a LINE L2 -306 3069 2986 5 927 256 189 38 0 chr15 44913296 44913349 -58581625 + CT-rich Low_complexity Low_complexity 2 56 0 5 927 375 328 103 34 chr15 44914227 44914489 -58580485 + B4A SINE B4 1 280 -12 5 927 229 226 0 19 chr15 44915319 44915373 -58579601 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 5 927 281 239 0 0 chr15 44915469 44915536 -58579438 + (TATG)n Simple_repeat Simple_repeat 3 69 0 5 927 398 320 120 0 chr15 44915542 44915667 -58579307 - RSINE1 SINE B4 -14 151 12 5 927 1695 268 37 21 chr15 44916374 44916839 -58578135 + Lx7 LINE L1 6763 7234 -462 5 927 507 45 0 0 chr15 44916876 44916942 -58578032 + (TG)n Simple_repeat Simple_repeat 2 67 0 5 927 524 275 17 0 chr15 44916965 44917085 -58577889 - B1_Mur4 SINE Alu -23 127 6 5 927 528 16 0 0 chr15 44917103 44917164 -58577810 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 5 927 723 199 64 5 chr15 44917164 44917351 -58577623 - RMER17B LTR ERVK -562 396 199 5 927 399 159 0 0 chr15 44917343 44917406 -58577568 - RMER17B LTR ERVK -347 63 1 5 927 236 391 65 27 chr15 44917417 44917601 -58577373 - MLT2B3 LTR ERVL -83 471 281 5 927 40 21 0 0 chr15 44918010 44918057 -58576917 + AT_rich Low_complexity Low_complexity 1 47 0 5 927 30 45 0 0 chr15 44918529 44918573 -58576401 + AT_rich Low_complexity Low_complexity 1 44 0 5 927 244 176 13 63 chr15 44919033 44919112 -58575862 - Lx6 LINE L1 0 7460 7386 5 927 3302 69 9 5 chr15 44919137 44919586 -58575388 - Lx3_Mus LINE L1 -8 7001 6551 5 927 5248 238 22 67 chr15 44919586 44921056 -58573918 - Lx7 LINE L1 -51 7645 6243 5 927 765 297 28 39 chr15 44921390 44921751 -58573223 - L1MC3 LINE L1 -547 7238 6882 5 927 202 135 27 0 chr15 44921809 44921846 -58573128 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 5 927 1676 121 0 4 chr15 44921852 44922093 -58572881 + Lx5 LINE L1 6315 6554 -496 5 927 1647 215 90 5 chr15 44922094 44922460 -58572514 + Lx5 LINE L1 6662 7045 -5 5 927 364 357 64 60 chr15 44922471 44922736 -58572238 - L1MC3 LINE L1 -955 6830 6565 5 927 262 271 0 0 chr15 44922798 44922868 -58572106 - L1MC3 LINE L1 -1317 6468 6399 5 927 280 213 60 12 chr15 44923021 44923187 -58571787 + (TA)n Simple_repeat Simple_repeat 1 174 0 5 927 346 311 71 6 chr15 44923251 44923419 -58571555 - L1MC3 LINE L1 -253 6091 5913 5 927 197 33 33 0 chr15 44923515 44923545 -58571429 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5 927 1202 99 0 0 chr15 44923545 44923707 -58571267 - B2_Mm2 SINE B2 -33 162 1 5 927 352 333 17 51 chr15 44923710 44923730 -58571244 - L1MCa LINE L1 -379 5975 5962 5 927 5624 132 36 48 chr15 44923730 44924700 -58570274 + RMER17B LTR ERVK 1 958 0 5 927 518 318 98 19 chr15 44924700 44925070 -58569904 - L1MCa LINE L1 -393 5961 5563 5 927 279 282 26 0 chr15 44925113 44925222 -58569752 + MLT2D LTR ERVL 25 138 -326 5 927 244 259 0 0 chr15 44925312 44925366 -58569608 + MLT2D LTR ERVL 514 567 0 5 927 441 0 0 0 chr15 44925452 44925501 -58569473 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 927 5309 172 80 12 chr15 44925730 44926761 -58568213 - RLTR25A LTR ERVK -2 1101 1 5 927 547 318 132 11 chr15 44926892 44927172 -58567802 - L1MCa LINE L1 -5916 592 279 5 927 278 340 14 14 chr15 44927249 44927395 -58567579 - L1MCa LINE L1 -6362 146 1 5 927 312 209 56 19 chr15 44927430 44927537 -58567437 + Lx4B LINE L1 6940 7050 -8 5 927 201 121 0 0 chr15 44927594 44927627 -58567347 + (A)n Simple_repeat Simple_repeat 1 33 0 5 927 33 25 0 0 chr15 44928317 44928357 -58566617 + AT_rich Low_complexity Low_complexity 1 40 0 5 927 255 216 165 110 chr15 44928870 44928979 -58565995 - PB1D10 SINE Alu -2 115 1 5 927 240 340 28 83 chr15 44928979 44929043 -58565931 - ID SINE ID -142 82 25 5 927 548 271 104 33 chr15 44929169 44929535 -58565439 - L1MA5 LINE L1 -25 6275 5884 5 927 1158 174 261 12 chr15 44929537 44929863 -58565111 + L1_Mur3 LINE L1 5277 5683 -197 5 927 6380 97 11 18 chr15 44929863 44931153 -58563821 - Lx3A LINE L1 -759 6222 4945 5 927 6380 234 72 68 chr15 44931157 44933158 -58561816 + Lx7 LINE L1 5683 7691 -5 5 927 28 71 0 0 chr15 44933171 44933227 -58561747 + AT_rich Low_complexity Low_complexity 1 56 0 5 927 648 220 0 64 chr15 44933227 44933368 -58561606 - B1_Mur4 SINE Alu 0 150 19 5 927 23 0 0 0 chr15 44933446 44933469 -58561505 + AT_rich Low_complexity Low_complexity 1 23 0 5 927 619 339 110 55 chr15 44934551 44935204 -58559770 - L2 LINE L2 -1241 2178 1490 5 927 355 380 6 25 chr15 44936077 44936239 -58558735 - RSINE1 SINE B4 -1 164 6 5 927 188 405 27 0 chr15 44936628 44936702 -58558272 + MIR SINE MIR 59 134 -128 5 927 295 242 16 40 chr15 44936827 44936952 -58558022 + Lx7 LINE L1 5951 6072 -1624 5 927 1610 228 97 8 chr15 44936931 44937311 -58557663 + Lx7 LINE L1 6212 6625 -1071 5 927 2187 174 5 27 chr15 44937315 44937682 -58557292 - ORR1B2 LTR MaLR -8 359 1 5 927 3754 240 62 40 chr15 44937682 44938739 -58556235 + Lx7 LINE L1 6621 7673 -23 5 927 252 271 42 14 chr15 44939033 44939104 -58555870 - B1_Mur2 SINE Alu -7 142 70 5 927 228 317 89 0 chr15 44939233 44939334 -58555640 - MER106B DNA MER1_type -56 1003 894 5 927 183 365 0 12 chr15 44941135 44941221 -58553753 - L2c LINE L2 -33 3354 3270 5 927 572 206 10 0 chr15 44941521 44941623 -58553351 - B1_Mus1 SINE Alu -6 142 40 6 927 240 228 99 25 chr15 44941557 44941638 -58553336 - RLTR25B LTR ERVK -519 509 423 6 927 934 96 48 6 chr15 44943412 44943580 -58551394 + RMER17B LTR ERVK 286 460 -498 6 927 528 45 0 0 chr15 44943716 44943783 -58551191 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 927 549 0 0 0 chr15 44944222 44944283 -58550691 + (GA)n Simple_repeat Simple_repeat 1 61 0 6 927 21 0 0 0 chr15 44944988 44945009 -58549965 + AT_rich Low_complexity Low_complexity 1 21 0 6 927 456 19 0 0 chr15 44947867 44947920 -58547054 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 927 596 307 102 26 chr15 44948892 44949156 -58545818 + B4A SINE B4 9 292 0 6 927 23 54 0 0 chr15 44950359 44950396 -58544578 + AT_rich Low_complexity Low_complexity 1 37 0 6 927 356 0 0 22 chr15 44950586 44950631 -58544343 + (TTA)n Simple_repeat Simple_repeat 3 46 0 6 927 22 70 0 0 chr15 44950814 44950857 -58544117 + AT_rich Low_complexity Low_complexity 1 43 0 6 927 574 316 10 0 chr15 44951305 44951501 -58543473 - Lx6 LINE L1 -29 7431 7234 6 927 180 137 39 19 chr15 44951735 44951787 -58543187 + (TA)n Simple_repeat Simple_repeat 2 54 0 6 927 1788 205 99 10 chr15 44952398 44952881 -58542093 - Lx9 LINE L1 -26 7618 7093 6 927 232 261 0 0 chr15 44952911 44952957 -58542017 - B1F SINE Alu -86 63 18 6 927 6330 184 169 34 chr15 44953491 44953747 -58541227 - L1VL4 LINE L1 -2475 3411 3153 6 927 441 0 0 0 chr15 44953747 44953796 -58541178 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 927 6330 184 169 34 chr15 44953796 44954058 -58540916 - L1VL4 LINE L1 -2734 3152 2874 6 927 423 0 0 0 chr15 44954058 44954105 -58540869 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 6 927 6330 184 169 34 chr15 44954105 44954360 -58540614 - L1VL4 LINE L1 -3013 2873 2638 6 927 2791 54 0 11 chr15 44954360 44954715 -58540259 - L1Md_F2 LINE L1 -2 6580 6230 6 927 6330 180 140 27 chr15 44954715 44956078 -58538896 - L1VL4 LINE L1 -3249 2637 1009 6 927 381 235 23 27 chr15 44956078 44956197 -58538777 + ORR1D2 LTR MaLR 210 327 -52 6 927 919 60 3 43 chr15 44956454 44956736 -58538238 + (TA)n Simple_repeat Simple_repeat 1 270 0 6 927 25 65 0 0 chr15 44957506 44957552 -58537422 + AT_rich Low_complexity Low_complexity 1 46 0 6 927 225 0 0 0 chr15 44957556 44957581 -58537393 + (GAAA)n Simple_repeat Simple_repeat 1 25 0 6 927 30 45 0 0 chr15 44957597 44957641 -58537333 + AT_rich Low_complexity Low_complexity 1 44 0 6 115 357 109 0 0 chr15 44957659 44957714 -58537260 + (TA)n Simple_repeat Simple_repeat 2 56 0 6 928 22 0 0 0 chr15 44958724 44958746 -58536228 + AT_rich Low_complexity Low_complexity 1 22 0 6 928 1100 272 86 59 chr15 44959896 44960556 -58534418 - Lx7 LINE L1 -2 7694 7017 6 928 270 167 19 0 chr15 44960559 44960613 -58534361 - Lx6 LINE L1 -1159 6301 6247 6 928 261 119 0 0 chr15 44960682 44960724 -58534250 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 928 1018 209 57 18 chr15 44960840 44961187 -58533787 - Lx9 LINE L1 -1669 5975 5582 6 928 21 0 0 0 chr15 44961201 44961222 -58533752 + AT_rich Low_complexity Low_complexity 1 21 0 6 928 507 282 0 9 chr15 44961225 44961336 -58533638 - B1F2 SINE Alu 0 149 40 6 928 474 267 41 118 chr15 44961357 44961383 -58533591 - B4 SINE B4 -72 220 200 6 928 2993 49 2 65 chr15 44961383 44961799 -58533175 - RLTR10 LTR ERVK 0 390 1 6 928 997 95 0 45 chr15 44961799 44961921 -58533053 - B1_Mus1 SINE Alu -29 119 1 6 928 474 287 38 89 chr15 44961921 44962029 -58532945 - B4 SINE B4 -93 199 27 6 928 238 337 71 40 chr15 44962116 44962215 -58532759 - PB1D10 SINE Alu 0 117 16 6 928 3362 188 71 24 chr15 44962225 44962524 -58532450 - RLTR17 LTR ERVK 0 692 366 6 928 1202 47 6 56 chr15 44962524 44962703 -58532271 + L1Md_F3 LINE L1 6413 6582 -2 6 928 3362 188 71 24 chr15 44962703 44963064 -58531910 - RLTR17 LTR ERVK -327 365 1 6 928 1005 92 0 0 chr15 44963738 44963880 -58531094 + (TTTC)n Simple_repeat Simple_repeat 3 144 0 6 928 1043 262 82 89 chr15 44964266 44964727 -58530247 - Lx6 LINE L1 -11 7449 6992 6 928 1728 201 41 36 chr15 44964763 44965206 -58529768 - Lx4B LINE L1 -10 7048 6604 6 928 486 0 0 0 chr15 44965226 44965280 -58529694 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 928 383 342 18 0 chr15 44965343 44965457 -58529517 - B3A SINE B2 -81 117 2 6 928 3095 241 80 1 chr15 44965661 44966428 -58528546 - Lx5 LINE L1 -76 6974 6148 6 928 1502 218 25 6 chr15 44966459 44966815 -58528159 - Lx5 LINE L1 -965 6085 5723 6 928 428 347 31 58 chr15 44966817 44967043 -58527931 + ORR1E LTR MaLR 73 292 -67 6 928 4377 130 94 30 chr15 44967267 44968140 -58526834 - L1_Mur2 LINE L1 -1294 4583 3655 6 928 7364 85 9 1 chr15 44968134 44969265 -58525709 + L1_Mus3 LINE L1 5499 6637 -1 6 928 533 287 46 41 chr15 44969488 44969684 -58525290 - B3A SINE B2 0 198 2 6 928 3921 178 27 17 chr15 44970360 44971064 -58523910 - RMER13A LTR ERVK -93 767 57 6 928 8303 71 13 0 chr15 44971063 44972225 -58522749 - ORR1A0-int LTR MaLR -615 1177 1 6 928 2968 29 3 0 chr15 44972225 44972570 -58522404 - ORR1A0 LTR MaLR 0 346 1 6 928 231 378 76 14 chr15 44972972 44973117 -58521857 + MIRb SINE MIR 77 230 -38 6 928 6417 106 45 5 chr15 44973245 44974368 -58520606 - Lx LINE L1 -1 6653 5475 6 928 378 0 0 0 chr15 44974442 44974484 -58520490 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 6 928 542 15 15 0 chr15 44974899 44974966 -58520008 + (TC)n Simple_repeat Simple_repeat 1 68 0 6 928 382 292 27 20 chr15 44974970 44975117 -58519857 - Lx6 LINE L1 -30 7430 7283 6 928 413 321 106 21 chr15 44975125 44975313 -58519661 + Lx6 LINE L1 7046 7249 -211 6 928 2068 171 24 29 chr15 44975313 44975724 -58519250 + Lx4A LINE L1 6642 7050 -8 6 928 270 0 0 0 chr15 44975725 44975755 -58519219 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 6 928 210 241 0 0 chr15 44975772 44975826 -58519148 + (ATG)n Simple_repeat Simple_repeat 1 54 0 6 928 246 343 56 0 chr15 44975827 44975935 -58519039 + MIRb SINE MIR 148 261 -7 6 928 207 0 0 0 chr15 44977427 44977450 -58517524 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6 928 245 350 59 18 chr15 44977945 44978166 -58516808 - Lx9 LINE L1 -292 7181 6952 6 928 737 301 92 29 chr15 44978723 44979324 -58515650 - Lx9 LINE L1 -1685 5959 5295 6 928 3314 162 45 37 chr15 44979364 44979493 -58515481 - Lx LINE L1 -1 6653 6535 6 928 195 42 0 0 chr15 44979493 44979517 -58515457 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 6 928 3314 162 45 37 chr15 44979517 44980035 -58514939 - Lx LINE L1 -120 6534 6002 6 928 3155 122 34 56 chr15 44980122 44980677 -58514297 + RLTR13D1 LTR ERVK 1 543 -359 6 928 4005 87 25 5 chr15 44980650 44981219 -58513755 + RLTR13D1 LTR ERVK 227 806 0 6 928 1557 284 94 20 chr15 44981219 44981785 -58513189 - L1_Mur3 LINE L1 -911 4969 4362 6 928 348 24 0 0 chr15 44981785 44981826 -58513148 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 928 1557 284 94 20 chr15 44981826 44982208 -58512766 - L1_Mur3 LINE L1 -1519 4361 3952 6 928 1479 330 50 5 chr15 44982305 44982914 -58512060 - Lx5 LINE L1 0 7460 6448 6 928 221 346 50 25 chr15 44983043 44983123 -58511851 - ID4 SINE ID 0 83 2 6 928 257 204 0 0 chr15 44983278 44983327 -58511647 - MTC LTR MaLR -360 61 13 6 928 4536 158 33 37 chr15 44983552 44984450 -58510524 - RMER17A2 LTR ERVK -11 895 1 6 928 402 279 90 60 chr15 44984822 44985055 -58509919 + LTR37A LTR ERV1 11 250 -176 6 928 558 156 38 0 chr15 44985055 44985268 -58509706 + (TG)n Simple_repeat Simple_repeat 1 221 0 6 928 997 234 62 49 chr15 44985955 44986324 -58508650 + ORR1D1 LTR MaLR 1 374 0 6 928 227 287 207 21 chr15 44987540 44987719 -58507255 - B3 SINE B2 0 216 8 6 928 503 327 95 38 chr15 44988379 44988830 -58506144 - HAL1 LINE L1 -1046 1461 985 6 928 504 117 0 0 chr15 44989620 44989697 -58505277 + (TCC)n Simple_repeat Simple_repeat 3 79 0 6 928 312 27 0 0 chr15 44989779 44989816 -58505158 + U2 snRNA snRNA 1 37 -151 6 928 7401 47 0 3 chr15 44990342 44991254 -58503720 + L1Md_F2 LINE L1 5674 6582 0 6 928 382 290 39 37 chr15 44993038 44993397 -58501577 + MMERVK10C-int LTR ERVK 3081 3532 -3289 6 928 265 235 85 12 chr15 44996367 44996449 -58498525 + MMERVK10C-int LTR ERVK 6562 6649 -932 6 928 233 394 42 89 chr15 44999182 44999441 -58495533 - MLT1K LTR MaLR -190 405 159 6 928 491 31 0 15 chr15 44999453 44999519 -58495455 + (TTTA)n Simple_repeat Simple_repeat 2 66 0 6 928 572 299 36 31 chr15 44999520 44999744 -58495230 - Lx6 LINE L1 -26 7434 7210 6 928 343 69 0 49 chr15 45000158 45000219 -58494755 + (TTATA)n Simple_repeat Simple_repeat 2 59 0 1 928 3769 120 157 1 chr15 45000485 45001184 -58493790 - Lx4A LINE L1 -783 6275 5458 2 928 844 68 0 0 chr15 45001188 45001305 -58493669 - L1_Mm LINE L1 -4459 1424 1308 3 928 4334 142 50 14 chr15 45001305 45002046 -58492928 + Lx4A LINE L1 6286 7053 -5 4 928 207 88 0 0 chr15 45002050 45002084 -58492890 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 5 928 1624 140 14 38 chr15 45002673 45002963 -58492011 + Lx3A LINE L1 6699 6981 0 6 928 833 220 39 4 chr15 45003022 45003203 -58491771 - 7SLRNA srpRNA srpRNA -113 201 18 7 928 260 216 126 51 chr15 45003813 45003978 -58490996 + L1MB3 LINE L1 6015 6181 -2 8 928 205 389 78 41 chr15 45003998 45004266 -58490708 + L2 LINE L2 1859 2136 -1283 9 928 751 319 57 40 chr15 45005252 45005601 -58489373 - MLT1A0 LTR MaLR -2 363 9 1 928 333 292 104 0 chr15 45005709 45005815 -58489159 + PB1D10 SINE Alu 1 117 0 1 928 1104 53 10 0 chr15 45006515 45006662 -58488312 + L1Md_F2 LINE L1 5459 5587 -586 1 928 8016 41 7 4 chr15 45006662 45007643 -58487331 + L1Md_F2 LINE L1 5587 6570 -12 1 928 216 97 0 0 chr15 45007657 45007688 -58487286 + (A)n Simple_repeat Simple_repeat 1 31 0 1 928 921 186 120 5 chr15 45007897 45008081 -58486893 + URR1A DNA MER1_type 1 205 -21 1 928 235 67 0 82 chr15 45008642 45008691 -58486283 + Lx9 LINE L1 7600 7644 0 1 928 203 164 18 35 chr15 45010333 45010390 -58484584 + T-rich Low_complexity Low_complexity 3 58 0 1 928 195 316 31 31 chr15 45010540 45010638 -58484336 + MIR3 SINE MIR 101 198 -10 1 928 780 210 61 48 chr15 45011015 45011245 -58483729 + Lx7 LINE L1 7464 7696 0 1 928 180 77 0 0 chr15 45011247 45011273 -58483701 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 928 282 73 0 0 chr15 45011278 45011319 -58483655 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 928 246 247 74 49 chr15 45011493 45011574 -58483400 - ID4 SINE ID 0 83 1 2 928 222 306 41 14 chr15 45012250 45012323 -58482651 + ID4 SINE ID 3 77 -6 2 928 445 292 0 17 chr15 45012507 45012622 -58482352 + MER94 DNA AcHobo 22 134 0 2 928 816 107 0 0 chr15 45013272 45013393 -58481581 + (GA)n Simple_repeat Simple_repeat 1 121 0 2 928 975 282 40 6 chr15 45013891 45014219 -58480755 + L1MA4 LINE L1 5555 5893 -407 2 928 763 85 8 8 chr15 45014254 45014372 -58480602 + (TTTC)n Simple_repeat Simple_repeat 3 120 0 2 928 1399 322 90 19 chr15 45014385 45015031 -58479943 - Charlie1a DNA MER1_type -694 761 70 2 928 715 182 7 7 chr15 45016076 45016220 -58478754 - RLTR31A_Mm LTR ERVK -440 144 1 2 928 255 260 82 0 chr15 45016768 45016841 -58478133 + ID4_ SINE ID 2 80 -3 2 928 315 0 0 0 chr15 45016913 45016948 -58478026 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 3 928 24 32 0 0 chr15 45016960 45016991 -58477983 + AT_rich Low_complexity Low_complexity 1 31 0 3 928 1297 206 160 15 chr15 45018455 45018786 -58476188 + MTB_Mm LTR MaLR 1 379 -28 3 928 994 112 0 7 chr15 45018781 45018925 -58476049 - B1_Mus1 SINE Alu 0 148 6 3 928 270 161 0 111 chr15 45018931 45018953 -58476021 + MTB_Mm LTR MaLR 352 373 -34 3 928 3053 23 0 0 chr15 45018953 45019299 -58475675 + ORR1A0 LTR MaLR 1 346 0 3 928 270 161 0 111 chr15 45019299 45019339 -58475635 + MTB_Mm LTR MaLR 374 407 0 3 928 1820 235 44 118 chr15 45019528 45020183 -58474791 + RMER19C LTR ERVK 1 607 -4 3 928 7738 34 5 2 chr15 45020185 45021123 -58473851 + L1Md_F2 LINE L1 5642 6582 0 3 928 387 0 0 0 chr15 45021743 45021786 -58473188 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 928 1154 288 65 48 chr15 45022048 45022402 -58472572 - MTEa LTR MaLR -2 377 18 3 928 378 0 0 0 chr15 45022875 45022917 -58472057 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 3 928 345 47 0 0 chr15 45022917 45022959 -58472015 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 928 2727 85 2 109 chr15 45023054 45023381 -58471593 + MTB LTR MaLR 1 317 -83 4 928 306 87 0 0 chr15 45023381 45023427 -58471547 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 4 928 2727 85 2 109 chr15 45023427 45023547 -58471427 + MTB LTR MaLR 318 400 0 4 928 316 335 131 17 chr15 45024026 45024202 -58470772 - MLT1F-int LTR MaLR -512 859 664 4 928 1610 108 31 8 chr15 45024231 45024492 -58470482 + L1_Mur1 LINE L1 5117 5383 -503 4 928 683 251 196 8 chr15 45024522 45024880 -58470094 - Lx9 LINE L1 -8 7636 7212 4 928 948 195 126 5 chr15 45024894 45025116 -58469858 - Lx9 LINE L1 -489 7155 6907 4 928 207 0 0 0 chr15 45025213 45025236 -58469738 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 928 504 352 90 33 chr15 45025297 45025726 -58469248 - MLT1F-int LTR MaLR -765 606 163 4 928 372 119 0 0 chr15 45025916 45025975 -58468999 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 928 450 53 0 0 chr15 45025996 45026053 -58468921 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 928 2386 100 152 0 chr15 45026056 45026465 -58468509 - IAPLTR2_Mm LTR ERVK 0 475 5 4 928 6083 46 4 12 chr15 45026469 45027221 -58467753 - IAPEz-int LTR ERVK 0 6481 5736 4 928 2197 68 0 0 chr15 45027220 45027498 -58467476 - IAPEz-int LTR ERVK -4845 1636 1359 4 928 3902 53 2 18 chr15 45027498 45028001 -58466973 - IAPEz-int LTR ERVK -5819 662 168 4 928 245 309 0 0 chr15 45028001 45028056 -58466918 - RLTR27 LTR ERVK -34 275 221 5 928 1141 104 10 80 chr15 45028056 45028255 -58466719 - IAPEz-int LTR ERVK -6288 193 9 4 928 2386 100 152 0 chr15 45028256 45028665 -58466309 - IAPLTR2_Mm LTR ERVK 0 475 5 4 928 321 169 0 0 chr15 45028665 45028724 -58466250 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 928 653 330 59 35 chr15 45028724 45029129 -58465845 - Lx8 LINE L1 -127 7517 6971 5 928 240 35 0 0 chr15 45030236 45030265 -58464709 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 928 226 158 70 0 chr15 45030673 45030730 -58464244 + Lx5 LINE L1 6982 7042 -8 5 928 357 123 0 0 chr15 45030795 45030860 -58464114 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 928 654 127 0 0 chr15 45030860 45030986 -58463988 + (GA)n Simple_repeat Simple_repeat 1 126 0 5 928 220 260 0 0 chr15 45032226 45032276 -58462698 + GA-rich Low_complexity Low_complexity 1 50 0 5 928 1012 82 0 65 chr15 45032683 45032853 -58462121 + L1_Mus1 LINE L1 6409 6567 0 5 928 818 176 91 43 chr15 45032984 45033192 -58461782 + BGLII_B LTR ERVK 214 431 -10 5 928 24 0 0 0 chr15 45033986 45034010 -58460964 + AT_rich Low_complexity Low_complexity 1 24 0 6 928 24 0 0 0 chr15 45035380 45035404 -58459570 + AT_rich Low_complexity Low_complexity 1 24 0 6 928 26 64 0 0 chr15 45035599 45035646 -58459328 + AT_rich Low_complexity Low_complexity 1 47 0 6 928 1088 165 73 0 chr15 45035738 45035944 -58459030 - Lx2 LINE L1 -2 6995 6775 6 928 4461 151 6 53 chr15 45035944 45036690 -58458284 - Lx2 LINE L1 -354 6643 5915 6 928 3984 128 102 16 chr15 45036690 45037133 -58457841 - RMER17D2 LTR ERVK 0 809 336 6 928 657 0 0 0 chr15 45037133 45037206 -58457768 + (GGAGA)n Simple_repeat Simple_repeat 2 74 0 6 928 3984 128 102 16 chr15 45037206 45037507 -58457467 - RMER17D2 LTR ERVK -474 335 1 6 928 4461 151 6 53 chr15 45037507 45037584 -58457390 - Lx2 LINE L1 -1083 5914 5859 6 928 4421 112 6 2 chr15 45037579 45038223 -58456751 - L1VL4 LINE L1 -5462 840 194 6 928 3727 112 75 0 chr15 45038251 45039081 -58455893 - L1VL1 LINE L1 -2374 1324 432 6 928 3759 123 8 57 chr15 45039085 45039715 -58455259 + L1_Mus3 LINE L1 6034 6632 -6 6 928 25 51 0 0 chr15 45040139 45040178 -58454796 + AT_rich Low_complexity Low_complexity 1 39 0 6 928 286 278 49 6 chr15 45040647 45040810 -58454164 - L1_Mur3 LINE L1 -4379 1501 1332 7 928 26 50 0 0 chr15 45041206 45041246 -58453728 + AT_rich Low_complexity Low_complexity 1 40 0 7 928 25 31 0 0 chr15 45042015 45042047 -58452927 + AT_rich Low_complexity Low_complexity 1 32 0 7 928 552 298 214 45 chr15 45042062 45042463 -58452511 - Lx8 LINE L1 -78 7395 6927 7 928 36 0 0 0 chr15 45042542 45042578 -58452396 + AT_rich Low_complexity Low_complexity 1 36 0 7 928 977 295 46 8 chr15 45042827 45043090 -58451884 - B4A SINE B4 -7 285 13 7 928 371 279 26 35 chr15 45043189 45043304 -58451670 + MLT1A0 LTR MaLR 31 144 -221 7 928 1106 279 45 8 chr15 45043440 45043819 -58451155 - L1_Mur3 LINE L1 -24 5856 5464 7 928 448 293 95 24 chr15 45044244 45044593 -58450381 - L1_Mur3 LINE L1 -409 5468 5090 7 928 753 218 0 41 chr15 45044784 45044956 -58450018 - RMER6C LTR ERVK -26 664 500 7 928 804 175 188 17 chr15 45044967 45045263 -58449711 - RMER6C LTR ERVK -322 398 1 7 928 252 261 27 9 chr15 45045546 45045658 -58449316 + (TCTA)n Simple_repeat Simple_repeat 1 114 0 7 928 28 0 0 0 chr15 45046119 45046147 -58448827 + AT_rich Low_complexity Low_complexity 1 28 0 8 928 315 220 17 0 chr15 45046196 45046255 -58448719 + tRNA-Ala-GCA tRNA tRNA 2 61 -14 8 928 288 290 17 0 chr15 45046255 45046277 -58448697 + ID4 SINE ID 20 90 -62 8 928 225 0 0 0 chr15 45047798 45047823 -58447151 + (T)n Simple_repeat Simple_repeat 1 25 0 8 928 1559 48 0 0 chr15 45047865 45048051 -58446923 - B2_Mm1t SINE B2 -6 187 2 8 928 495 235 142 15 chr15 45048528 45048662 -58446312 + Lx6 LINE L1 7151 7301 -159 8 928 360 0 0 0 chr15 45048685 45048725 -58446249 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 928 984 62 0 0 chr15 45048725 45048852 -58446122 + (GA)n Simple_repeat Simple_repeat 1 128 0 8 928 208 188 0 20 chr15 45049848 45049897 -58445077 + T-rich Low_complexity Low_complexity 2 49 0 8 928 1515 234 134 42 chr15 45050050 45050595 -58444379 - Lx7 LINE L1 -124 7572 6978 8 928 8387 30 0 0 chr15 45050580 45051556 -58443418 - L1Md_T LINE L1 -1 6581 5606 9 928 922 287 0 0 chr15 45051555 45051764 -58443210 - Lx7 LINE L1 -692 7004 6796 8 928 604 281 98 66 chr15 45051762 45052371 -58442603 + L1_Mur3 LINE L1 120 871 -6841 9 928 1549 256 66 19 chr15 45052429 45052900 -58442074 - Lx2B LINE L1 -94 6914 6414 9 928 366 80 0 0 chr15 45053024 45053074 -58441900 + (TA)n Simple_repeat Simple_repeat 2 51 0 9 928 712 248 69 15 chr15 45053126 45053427 -58441547 - Lx7 LINE L1 -1695 6001 5669 8 928 434 279 122 8 chr15 45053590 45053968 -58441006 + L1M2 LINE L1 5308 5740 -560 9 928 1014 313 18 33 chr15 45053978 45054308 -58440666 + ORR1E LTR MaLR 2 326 -33 9 928 1444 254 131 48 chr15 45054292 45054563 -58440411 + ORR1E-int LTR MaLR 189 522 -848 9 928 1011 224 9 0 chr15 45054563 45054786 -58440188 - URR1A DNA MER1_type -1 225 1 9 928 1444 292 103 94 chr15 45054786 45055436 -58439538 + ORR1E-int LTR MaLR 523 1199 -171 9 928 546 16 0 0 chr15 45055436 45055499 -58439475 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 9 928 1444 292 103 94 chr15 45055499 45055563 -58439411 + ORR1E-int LTR MaLR 1200 1261 -109 9 928 27 92 0 0 chr15 45055707 45055783 -58439191 + AT_rich Low_complexity Low_complexity 1 76 0 9 928 282 163 61 10 chr15 45056428 45056527 -58438447 + (TA)n Simple_repeat Simple_repeat 1 104 0 9 928 345 47 0 0 chr15 45057646 45057689 -58437285 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 928 748 43 0 0 chr15 45057897 45057989 -58436985 + L1Md_F3 LINE L1 6045 6136 -448 1 928 504 0 0 0 chr15 45058763 45058819 -58436155 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 928 1077 95 0 20 chr15 45058984 45059134 -58435840 + B1_Mus2 SINE Alu 1 147 0 1 928 6646 156 18 38 chr15 45062003 45062686 -58432288 + Lx3_Mus LINE L1 5502 6071 -938 1 928 228 35 0 0 chr15 45062686 45062715 -58432259 + (GGGTG)n Simple_repeat Simple_repeat 3 31 0 1 928 6646 121 35 14 chr15 45062715 45063624 -58431350 + Lx3_Mus LINE L1 6072 7008 -1 1 928 24 32 0 0 chr15 45064200 45064231 -58430743 + AT_rich Low_complexity Low_complexity 1 31 0 1 928 2288 233 115 33 chr15 45064910 45065553 -58429421 - Lx5 LINE L1 -438 6612 5917 1 928 8386 27 1 2 chr15 45066026 45067514 -58427460 - L1Md_T LINE L1 0 6582 5097 1 928 288 196 85 38 chr15 45067509 45067615 -58427359 - L1M2 LINE L1 -871 5272 5162 1 928 638 25 12 0 chr15 45067628 45067708 -58427266 + (GA)n Simple_repeat Simple_repeat 2 82 0 1 928 1345 148 68 84 chr15 45067708 45068091 -58426883 - RMER17C LTR ERVK -33 377 1 1 928 908 143 107 0 chr15 45068169 45068337 -58426637 + B2_Mm2 SINE B2 2 187 -8 1 928 1302 221 39 62 chr15 45068999 45069356 -58425618 - MT2B LTR ERVL 0 601 253 1 928 367 252 68 48 chr15 45069721 45069899 -58425075 + MT2A LTR ERVL 94 375 -100 1 928 731 308 88 40 chr15 45071534 45072035 -58422939 - Lx8 LINE L1 -40 7433 6909 1 928 533 306 152 8 chr15 45072487 45072737 -58422237 - B4A SINE B4 -4 288 3 1 928 1069 254 58 4 chr15 45073383 45073659 -58421315 - Lx6 LINE L1 0 7460 7170 1 928 11473 211 55 25 chr15 45073691 45077526 -58417448 - Lx6 LINE L1 -441 7019 3046 1 928 2260 58 0 0 chr15 45077529 45077805 -58417169 - L1Md_T LINE L1 -308 6274 5999 1 928 1170 257 69 42 chr15 45078097 45078503 -58416471 - RLTR20A2 LTR ERVK -161 417 1 1 928 22 0 0 0 chr15 45078678 45078700 -58416274 + AT_rich Low_complexity Low_complexity 1 22 0 1 928 381 43 0 0 chr15 45078824 45078871 -58416103 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 928 647 294 145 43 chr15 45079931 45080255 -58414719 + RMER20B LTR ERVK 234 590 -37 1 928 23 33 0 0 chr15 45081339 45081369 -58413605 + AT_rich Low_complexity Low_complexity 1 30 0 1 928 488 271 68 97 chr15 45081771 45082122 -58412852 - Lx7 LINE L1 0 7696 7356 1 928 222 219 0 0 chr15 45082156 45082197 -58412777 + A-rich Low_complexity Low_complexity 3 43 0 1 928 483 286 27 0 chr15 45082198 45082345 -58412629 - Lx7 LINE L1 -377 7319 7169 1 928 453 19 0 0 chr15 45082346 45082400 -58412574 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 928 1679 267 76 9 chr15 45082400 45082669 -58412305 - Lx7 LINE L1 -1522 6174 5882 1 928 495 0 0 0 chr15 45082669 45082724 -58412250 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 928 5943 226 65 39 chr15 45082724 45084574 -58410400 - Lx7 LINE L1 -1815 5881 3970 1 928 475 206 46 37 chr15 45084574 45084715 -58410259 + MTD LTR MaLR 213 403 -18 1 14 32420 70 3 2 chr15 45084825 45089880 -58405094 - L1Md_F2 LINE L1 0 6582 1527 1 929 369 0 0 0 chr15 45090065 45090106 -58404868 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 929 270 0 0 0 chr15 45090106 45090135 -58404839 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 929 261 98 0 0 chr15 45090135 45090176 -58404798 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 929 230 291 90 34 chr15 45090182 45090271 -58404703 - B4 SINE B4 -31 261 168 1 929 366 23 0 0 chr15 45090523 45090566 -58404408 + (TAA)n Simple_repeat Simple_repeat 2 44 0 1 929 228 86 0 0 chr15 45090566 45090601 -58404373 + (CATA)n Simple_repeat Simple_repeat 1 35 0 1 929 363 322 50 37 chr15 45091255 45091497 -58403477 - Lx7 LINE L1 -333 7363 7119 1 929 304 269 13 0 chr15 45091499 45091577 -58403397 + Lx7 LINE L1 6921 6999 -697 1 929 13218 132 4 1 chr15 45091576 45093708 -58401266 + L1_Mm LINE L1 2814 4950 -933 1 929 2563 141 17 5 chr15 45093710 45094124 -58400850 + L1_Mus3 LINE L1 6219 6637 -1 1 929 340 272 43 17 chr15 45094145 45094261 -58400713 + Lx7 LINE L1 6989 7107 -589 1 929 332 239 58 32 chr15 45094293 45094449 -58400525 - Lx8 LINE L1 -1 7472 7313 1 929 248 282 64 0 chr15 45094914 45095024 -58399950 + L1MB8 LINE L1 5642 5758 -426 1 929 1466 92 9 0 chr15 45095115 45095333 -58399641 - L1_Mus2 LINE L1 -2 6564 6345 1 929 523 176 0 10 chr15 45095333 45095436 -58399538 + Lx5 LINE L1 3363 3464 -2413 1 929 342 100 0 0 chr15 45095436 45095496 -58399478 + (A)n Simple_repeat Simple_repeat 1 60 0 1 929 180 0 0 0 chr15 45095523 45095543 -58399431 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 929 2398 182 15 4 chr15 45095563 45096252 -58398722 + Lx5 LINE L1 5441 6031 -1019 1 929 3247 255 19 17 chr15 45096252 45097003 -58397971 + Lx5 LINE L1 6281 7032 -18 1 929 225 0 0 0 chr15 45097005 45097030 -58397944 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 1 929 253 300 86 37 chr15 45097094 45097281 -58397693 + L1MB8 LINE L1 5884 6079 -99 1 929 22 0 0 0 chr15 45099283 45099305 -58395669 + AT_rich Low_complexity Low_complexity 1 22 0 1 929 315 0 0 0 chr15 45099441 45099476 -58395498 + (TCTA)n Simple_repeat Simple_repeat 1 35 0 1 929 546 185 8 15 chr15 45099839 45099971 -58395003 + CT-rich Low_complexity Low_complexity 2 132 0 1 929 377 278 0 0 chr15 45100711 45100801 -58394173 - B1_Mur3 SINE Alu -50 99 10 1 929 906 66 0 0 chr15 45100820 45100942 -58394032 + (TTTC)n Simple_repeat Simple_repeat 2 123 0 1 929 389 320 55 22 chr15 45101085 45101267 -58393707 - L1M2 LINE L1 -951 5192 5005 1 929 314 277 0 24 chr15 45101348 45101433 -58393541 + L1M2 LINE L1 4886 4968 -1175 1 929 286 229 8 8 chr15 45101949 45102072 -58392902 + CT-rich Low_complexity Low_complexity 4 126 0 1 929 402 330 26 16 chr15 45102197 45102391 -58392583 + B3A SINE B2 3 198 0 1 929 520 328 25 55 chr15 45106336 45106536 -58388438 - B3A SINE B2 -21 195 2 1 929 900 114 0 0 chr15 45107330 45107470 -58387504 + (TTCC)n Simple_repeat Simple_repeat 3 142 0 1 929 5803 93 11 6 chr15 45107490 45108309 -58386665 - L1_Mus1 LINE L1 0 6567 5745 1 929 7061 145 131 9 chr15 45109363 45110107 -58384867 + L1_Mus4 LINE L1 4809 5641 -995 1 929 5680 141 47 8 chr15 45110107 45111029 -58383945 + RMER17B LTR ERVK 1 958 0 1 929 7061 86 50 9 chr15 45111029 45111982 -58382992 + L1_Mus4 LINE L1 5642 6636 0 1 929 546 13 25 25 chr15 45114399 45114479 -58380495 + (TTTTC)n Simple_repeat Simple_repeat 2 81 0 1 929 663 275 0 0 chr15 45114487 45114636 -58380338 - B1_Mur2 SINE Alu 0 149 1 1 929 861 280 80 36 chr15 45114689 45115052 -58379922 - MTEb LTR MaLR 0 379 1 1 929 200 143 0 23 chr15 45115067 45115110 -58379864 + (TATG)n Simple_repeat Simple_repeat 3 44 0 1 929 1562 264 10 24 chr15 45116616 45117031 -58377943 + MTD LTR MaLR 3 411 -8 1 929 2262 292 82 101 chr15 45117035 45118226 -58376748 + MTD-int LTR MaLR 1 1169 -89 1 929 4270 224 27 1 chr15 45118226 45119072 -58375902 - Lx5 LINE L1 -13 7037 6170 1 929 421 269 21 28 chr15 45119075 45119107 -58375867 + MTD-int LTR MaLR 1115 1149 -109 1 929 194 0 0 37 chr15 45119107 45119134 -58375840 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1 929 421 269 21 28 chr15 45119134 45119246 -58375728 + MTD-int LTR MaLR 1150 1258 0 1 929 1198 339 116 39 chr15 45119337 45119616 -58375358 - Lx8 LINE L1 -587 7109 6799 1 929 880 283 55 33 chr15 45119616 45119978 -58374996 + ORR1D2 LTR MaLR 1 370 0 1 929 1552 316 87 48 chr15 45119978 45121109 -58373865 - Lx8 LINE L1 -898 6798 5591 1 929 1167 63 0 0 chr15 45121540 45121682 -58373292 + B1_Mus1 SINE Alu 1 142 -6 1 929 356 113 0 31 chr15 45121930 45121994 -58372980 + (TCC)n Simple_repeat Simple_repeat 3 64 0 1 929 382 287 103 43 chr15 45122076 45122309 -58372665 + MLT1C LTR MaLR 59 305 -162 1 929 236 300 33 0 chr15 45122371 45122431 -58372543 - Lx9 LINE L1 -387 7257 7196 1 929 1155 88 0 0 chr15 45122505 45122652 -58372322 - B1_Mus2 SINE Alu 0 147 1 1 929 253 313 9 0 chr15 45122652 45122767 -58372207 - Lx7 LINE L1 -22 7674 7559 1 929 252 86 0 0 chr15 45122817 45122852 -58372122 + (CATA)n Simple_repeat Simple_repeat 4 38 0 1 929 276 276 75 0 chr15 45122852 45122986 -58371988 - Lx7 LINE L1 -244 7452 7309 1 929 994 233 99 13 chr15 45123168 45123481 -58371493 + Lx9 LINE L1 7295 7634 -10 1 929 27610 192 69 10 chr15 45124672 45125357 -58369617 + L1_Mus2 LINE L1 522 1249 -4634 1 929 270 0 0 0 chr15 45125357 45125387 -58369587 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 929 27610 134 11 19 chr15 45125387 45129390 -58365584 + L1_Mus2 LINE L1 1250 5214 -669 1 929 1133 55 0 7 chr15 45129390 45129537 -58365437 + B1_Mus2 SINE Alu 2 147 0 1 929 27610 99 16 19 chr15 45129537 45130887 -58364087 + L1_Mus2 LINE L1 5215 6566 0 1 929 265 141 0 83 chr15 45130889 45130997 -58363977 + (CATATA)n Simple_repeat Simple_repeat 2 100 0 1 929 30 27 0 0 chr15 45132737 45132774 -58362200 + AT_rich Low_complexity Low_complexity 1 37 0 1 929 261 310 24 59 chr15 45133133 45133235 -58361739 - MIR SINE MIR -154 114 11 1 929 26 0 0 0 chr15 45133662 45133688 -58361286 + AT_rich Low_complexity Low_complexity 1 26 0 1 929 21 0 0 0 chr15 45133952 45133973 -58361001 + AT_rich Low_complexity Low_complexity 1 21 0 1 929 608 70 0 11 chr15 45133991 45134078 -58360896 + (TTCC)n Simple_repeat Simple_repeat 3 88 0 1 929 33786 72 2 21 chr15 45134080 45137751 -58357223 - L1Md_F2 LINE L1 0 6582 2926 1 929 1801 78 25 0 chr15 45137751 45137996 -58356978 - L1Md_F3 LINE L1 0 6584 6334 1 929 33786 90 1 30 chr15 45137996 45140430 -58354544 - L1Md_F2 LINE L1 -2958 2925 631 1 929 2251 237 58 7 chr15 45140442 45141136 -58353838 - Lx4B LINE L1 -3 6973 6242 1 929 1082 244 123 69 chr15 45141350 45141813 -58353161 - RMER13A LTR ERVK -372 488 1 1 929 2129 214 21 12 chr15 45141813 45142292 -58352682 - Lx4B LINE L1 -771 6287 5805 1 929 7474 182 26 42 chr15 45142294 45144052 -58350922 - Lx4B LINE L1 -443 5434 3706 1 929 437 227 9 9 chr15 45144057 45144168 -58350806 - Lx4A LINE L1 -1 7057 6947 1 929 8132 44 1 1 chr15 45144186 45145410 -58349564 - L1Md_F2 LINE L1 0 6582 5359 1 929 1994 179 12 0 chr15 45145420 45145761 -58349213 - Lx4A LINE L1 -153 6905 6561 1 929 1931 131 11 93 chr15 45145763 45146047 -58348927 + ORR1A2 LTR MaLR 3 269 -58 1 929 1945 97 0 14 chr15 45146047 45146330 -58348644 + L1Md_F2 LINE L1 6294 6572 -10 1 929 1931 131 11 93 chr15 45146330 45146399 -58348575 + ORR1A2 LTR MaLR 270 327 0 1 929 8820 164 30 60 chr15 45146399 45148245 -58346729 + ORR1A2-int LTR MaLR 1 1792 0 1 929 1895 121 36 60 chr15 45148245 45148579 -58346395 + ORR1A2 LTR MaLR 1 326 -1 1 929 287 0 0 100 chr15 45148588 45148658 -58346316 + (CAAAC)n Simple_repeat Simple_repeat 2 64 0 1 929 1444 193 64 4 chr15 45148673 45148954 -58346020 - Lx4A LINE L1 -493 6565 6268 1 929 235 151 56 19 chr15 45148988 45149042 -58345932 + RLTR22_Mus LTR ERVK 1 56 -1752 1 929 25 0 0 0 chr15 45149444 45149469 -58345505 + AT_rich Low_complexity Low_complexity 1 25 0 1 929 362 391 27 9 chr15 45149490 45149601 -58345373 - RSINE1 SINE B4 0 165 53 1 929 188 111 0 27 chr15 45151244 45151281 -58343693 + (TTTTC)n Simple_repeat Simple_repeat 4 39 0 1 929 2286 256 57 9 chr15 45151298 45151847 -58343127 - Lx5 LINE L1 -11 7039 6465 2 929 2719 114 5 30 chr15 45151847 45152280 -58342694 + BGLII_Mus LTR ERVK 1 422 0 2 929 427 166 74 163 chr15 45152629 45152831 -58342143 + RMER3D-int LTR ERVK 660 843 -1999 2 929 499 187 319 19 chr15 45152910 45153070 -58341904 + RMER3D-int LTR ERVK 1014 1221 -1621 2 929 4017 172 71 41 chr15 45153071 45154000 -58340974 - RMER17B LTR ERVK 0 958 2 2 929 5128 217 58 61 chr15 45154008 45155640 -58339334 + RMER3D-int LTR ERVK 1216 2841 -1 2 929 2536 112 76 2 chr15 45155641 45156034 -58338940 + BGLII_Mus LTR ERVK 1 422 0 2 929 584 74 0 21 chr15 45156084 45156180 -58338794 + (TCTCTG)n Simple_repeat Simple_repeat 2 95 0 2 929 5599 202 35 29 chr15 45156182 45158026 -58336948 - Lx5 LINE L1 -613 6437 4575 2 929 1170 195 18 18 chr15 45158004 45158286 -58336688 + L1_Mur2 LINE L1 4698 4979 -898 2 929 180 0 0 0 chr15 45158294 45158314 -58336660 + (CAAAC)n Simple_repeat Simple_repeat 3 22 0 2 929 514 323 46 21 chr15 45158354 45158591 -58336383 - Lx8 LINE L1 -1042 6431 6189 2 929 467 177 10 0 chr15 45159599 45159695 -58335279 + CT-rich Low_complexity Low_complexity 2 98 0 2 929 1512 61 186 0 chr15 45159817 45160048 -58334926 - L1_Mus2 LINE L1 0 6566 6293 2 929 624 14 0 0 chr15 45161534 45161607 -58333367 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 2 929 945 217 39 32 chr15 45161834 45162219 -58332755 - RMER6B LTR ERVK 0 461 14 2 929 246 81 0 0 chr15 45162806 45162843 -58332131 + (TCTCTG)n Simple_repeat Simple_repeat 6 42 0 2 929 726 102 8 16 chr15 45163073 45163202 -58331772 + (TTTC)n Simple_repeat Simple_repeat 2 129 0 2 929 310 231 242 11 chr15 45163420 45163597 -58331377 + L1M2 LINE L1 5116 5332 -811 2 929 378 298 26 19 chr15 45163730 45163884 -58331090 + Lx9 LINE L1 7225 7379 -265 2 929 324 258 0 151 chr15 45163895 45164041 -58330933 - Lx5 LINE L1 0 7050 6927 2 929 26 30 0 0 chr15 45164088 45164121 -58330853 + AT_rich Low_complexity Low_complexity 1 33 0 2 929 23 33 0 0 chr15 45164490 45164520 -58330454 + AT_rich Low_complexity Low_complexity 1 30 0 2 929 26 30 0 0 chr15 45164555 45164588 -58330386 + AT_rich Low_complexity Low_complexity 1 33 0 2 929 565 314 77 14 chr15 45164636 45164767 -58330207 - L1MA8 LINE L1 -37 6254 6121 2 929 534 40 27 0 chr15 45164767 45164841 -58330133 - L1_Mus2 LINE L1 0 6566 6491 2 929 565 314 77 14 chr15 45164841 45165071 -58329903 - L1MA8 LINE L1 -171 6120 5870 2 929 859 262 40 9 chr15 45165316 45165539 -58329435 - L1_Mur2 LINE L1 -97 5780 5551 2 929 999 269 48 4 chr15 45165528 45165778 -58329196 + Lx6 LINE L1 7146 7406 -54 2 929 330 98 0 0 chr15 45165786 45165837 -58329137 + (ATG)n Simple_repeat Simple_repeat 3 53 0 2 929 503 265 0 0 chr15 45165876 45165993 -58328981 - Lx9 LINE L1 -447 7197 7081 2 929 771 215 6 11 chr15 45166009 45166188 -58328786 + Lx9 LINE L1 7294 7471 -173 2 929 225 0 0 0 chr15 45166206 45166231 -58328743 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 929 26 74 0 0 chr15 45166311 45166365 -58328609 + AT_rich Low_complexity Low_complexity 1 54 0 2 929 22 0 0 0 chr15 45166389 45166411 -58328563 + AT_rich Low_complexity Low_complexity 1 22 0 2 929 705 307 98 70 chr15 45166505 45166946 -58328028 + RMER13A LTR ERVK 1 453 -407 2 929 21 0 0 0 chr15 45167448 45167469 -58327505 + AT_rich Low_complexity Low_complexity 1 21 0 2 929 15460 132 23 2 chr15 45167618 45171597 -58323377 + L1_Mus2 LINE L1 591 6036 -530 2 929 5126 102 1 14 chr15 45171594 45172327 -58322647 + L1_Mus2 LINE L1 5842 6565 -1 2 929 617 296 57 14 chr15 45172558 45172767 -58322207 + ID_B1 SINE B4 3 220 -4 2 929 31 0 0 0 chr15 45172777 45172808 -58322166 + AT_rich Low_complexity Low_complexity 1 31 0 2 929 261 0 0 0 chr15 45174072 45174101 -58320873 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 929 22 94 0 0 chr15 45175618 45175682 -58319292 + AT_rich Low_complexity Low_complexity 1 64 0 2 929 214 190 0 23 chr15 45176363 45176437 -58318537 + (TATG)n Simple_repeat Simple_repeat 1 72 0 2 929 194 312 72 10 chr15 45176729 45176826 -58318148 - MIR SINE MIR -36 226 124 2 929 297 259 188 8 chr15 45177900 45178017 -58316957 - MTE-int LTR MaLR -1184 396 259 2 929 451 276 29 62 chr15 45178051 45178260 -58316714 + L1MB5 LINE L1 5956 6157 -17 2 929 450 271 15 15 chr15 45178339 45178470 -58316504 - MTEb LTR MaLR 0 379 249 2 929 1526 363 74 10 chr15 45178841 45179540 -58315434 + MTE-int LTR MaLR 795 1538 -42 2 929 565 312 70 90 chr15 45179539 45179895 -58315079 + ORR1E LTR MaLR 9 357 -2 2 929 5360 85 11 12 chr15 45180044 45180791 -58314183 - L1Md_F2 LINE L1 -13 6569 5824 2 929 367 288 19 82 chr15 45181632 45181840 -58313134 + B3A SINE B2 2 196 -2 2 929 33 43 0 0 chr15 45182370 45182417 -58312557 + AT_rich Low_complexity Low_complexity 1 47 0 2 929 5932 142 7 20 chr15 45183040 45184002 -58310972 - Lx LINE L1 -3 6651 5702 2 929 358 315 17 51 chr15 45184226 45184343 -58310631 - B3A SINE B2 -16 182 70 2 929 21 57 0 0 chr15 45184422 45184457 -58310517 + AT_rich Low_complexity Low_complexity 1 35 0 2 929 253 287 59 0 chr15 45184738 45184874 -58310100 - L1M5 LINE L1 -3262 2884 2741 2 929 230 100 49 24 chr15 45185089 45185130 -58309844 - Charlie12 DNA MER1_type -359 2514 2473 2 929 1110 347 104 106 chr15 45185118 45186247 -58308727 + ORR1E-int LTR MaLR 16 1141 -439 2 929 3151 165 68 24 chr15 45186471 45187091 -58307883 - RLTR17 LTR ERVK 0 692 46 2 929 992 93 0 0 chr15 45187121 45187261 -58307713 - B2_Mm2 SINE B2 -55 140 1 2 929 180 0 0 0 chr15 45187780 45187800 -58307174 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2 929 626 276 149 62 chr15 45187877 45188186 -58306788 + ORR1E-int LTR MaLR 1218 1553 -27 2 929 271 301 99 88 chr15 45188168 45188350 -58306624 + ORR1E LTR MaLR 9 192 -167 2 929 308 275 70 0 chr15 45188539 45188681 -58306293 - L1MB4 LINE L1 -6453 154 3 2 929 314 357 102 86 chr15 45189440 45189814 -58305160 + LTR55 LTR ERV 140 519 -29 2 929 245 258 76 0 chr15 45190425 45190491 -58304483 + 4.5SRNA scRNA scRNA 16 86 -8 2 929 252 254 0 31 chr15 45190434 45190499 -58304475 + RLTR25A LTR ERVK 509 571 -532 2 929 645 110 0 0 chr15 45190448 45190539 -58304435 + B1_Mus2 SINE Alu 47 137 -10 2 929 2573 188 137 95 chr15 45190614 45191480 -58303494 - RMER17A2 LTR ERVK -3 903 1 2 929 226 265 98 0 chr15 45192534 45192636 -58302338 + L1MA6 LINE L1 6189 6300 0 2 929 22 0 0 0 chr15 45192963 45192985 -58301989 + AT_rich Low_complexity Low_complexity 1 22 0 2 929 286 346 73 51 chr15 45193001 45193102 -58301872 + MLT2B3 LTR ERVL 95 199 -355 2 929 414 0 0 0 chr15 45193102 45193148 -58301826 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 929 286 346 73 51 chr15 45193148 45193183 -58301791 + MLT2B3 LTR ERVL 200 234 -320 2 929 670 319 46 32 chr15 45193303 45193585 -58301389 - MTE2a LTR MaLR -9 370 85 2 929 440 343 45 0 chr15 45193635 45193836 -58301138 + Ricksha_c DNA MuDR 710 919 -1129 2 929 660 147 260 0 chr15 45194020 45194170 -58300804 + B2_Mm2 SINE B2 2 190 -5 2 929 615 208 0 0 chr15 45194252 45194401 -58300573 - Lx9 LINE L1 -9 7635 7487 2 929 610 298 43 22 chr15 45194407 45194592 -58300382 - B3 SINE B2 -3 213 25 2 929 596 203 30 30 chr15 45195514 45195646 -58299328 - MTEa LTR MaLR -8 371 240 2 929 303 350 75 63 chr15 45195638 45195722 -58299252 + MTEa LTR MaLR 101 183 -196 2 929 459 0 0 0 chr15 45195722 45195773 -58299201 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 929 495 0 0 0 chr15 45195773 45195827 -58299147 + (GA)n Simple_repeat Simple_repeat 2 56 0 2 929 303 350 75 63 chr15 45195827 45195915 -58299059 + MTEa LTR MaLR 184 275 -104 2 929 237 359 67 10 chr15 45195963 45196067 -58298907 - MTEa LTR MaLR -217 162 53 2 929 261 268 48 12 chr15 45196074 45196157 -58298817 - MTEa LTR MaLR -293 86 1 2 929 21 36 0 0 chr15 45196166 45196194 -58298780 + AT_rich Low_complexity Low_complexity 1 28 0 2 929 1561 91 39 0 chr15 45197501 45197733 -58297241 - L1_Mus3 LINE L1 -15 6623 6383 2 929 22 0 0 0 chr15 45198134 45198156 -58296818 + AT_rich Low_complexity Low_complexity 1 22 0 2 929 1085 68 7 7 chr15 45198170 45198317 -58296657 + B1_Mus1 SINE Alu 2 148 0 2 929 192 40 0 0 chr15 45198317 45198342 -58296632 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 2 929 3214 258 24 19 chr15 45198930 45199775 -58295199 - Lx7 LINE L1 -517 7179 6331 2 929 278 152 0 29 chr15 45199780 45199848 -58295126 + Lx7 LINE L1 7631 7696 0 2 929 749 315 25 0 chr15 45200060 45200263 -58294711 + ORR1D2 LTR MaLR 1 208 -162 2 929 658 261 0 0 chr15 45200267 45200401 -58294573 + B1_Mur3 SINE Alu 5 138 -11 2 929 424 250 88 119 chr15 45200394 45200553 -58294421 + ORR1D2 LTR MaLR 217 370 0 2 929 595 127 18 9 chr15 45200603 45200714 -58294260 - Lx LINE L1 -5 6649 6538 2 929 247 252 126 0 chr15 45200908 45201019 -58293955 - Lx9 LINE L1 0 7644 7520 2 929 633 218 20 0 chr15 45201032 45201179 -58293795 - Lx9 LINE L1 -188 7456 7307 2 929 1735 318 72 75 chr15 45201214 45202234 -58292740 - MTC-int LTR MaLR -165 1093 77 2 929 1162 286 8 93 chr15 45202235 45202681 -58292293 - RMER19C LTR ERVK 0 611 146 2 929 1376 272 35 41 chr15 45202710 45203104 -58291870 - MTD LTR MaLR -25 394 3 2 929 639 305 29 0 chr15 45203256 45203466 -58291508 + ID_B1 SINE B4 3 218 -6 2 929 253 276 97 48 chr15 45204124 45204227 -58290747 - MER63B DNA AcHobo -41 395 288 2 929 1390 289 74 55 chr15 45204313 45204753 -58290221 - RLTR40 LTR ERVK -82 735 287 2 929 258 32 0 0 chr15 45204753 45204784 -58290190 + (CATA)n Simple_repeat Simple_repeat 2 32 0 2 929 1390 289 74 55 chr15 45204784 45205047 -58289927 - RLTR40 LTR ERVK -531 286 21 2 929 1532 147 0 8 chr15 45205265 45205519 -58289455 - Lx LINE L1 -7 6647 6396 2 929 312 196 0 0 chr15 45205519 45205575 -58289399 - Lx2 LINE L1 -348 6649 6594 2 929 2626 206 57 13 chr15 45205646 45205730 -58289244 - RLTR20B3 LTR ERVK -7 570 485 2 929 360 0 0 0 chr15 45205730 45205770 -58289204 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 929 2626 206 57 13 chr15 45205770 45206231 -58288743 - RLTR20B3 LTR ERVK -93 484 2 2 929 497 266 131 0 chr15 45206758 45206987 -58287987 - Lx9 LINE L1 -1 7643 7385 2 929 652 231 7 0 chr15 45207070 45207213 -58287761 - Lx9 LINE L1 -381 7263 7120 2 929 294 174 0 0 chr15 45207211 45207257 -58287717 + Lx9 LINE L1 6821 6866 -778 2 929 264 120 0 0 chr15 45207262 45207312 -58287662 + (TTG)n Simple_repeat Simple_repeat 2 51 0 3 929 647 75 0 11 chr15 45207591 45207686 -58287288 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 3 929 282 122 0 0 chr15 45207821 45207862 -58287112 - ORR1A4 LTR MaLR -175 154 114 3 929 787 358 40 38 chr15 45207876 45208089 -58286885 - Lx8 LINE L1 -297 7176 6957 3 929 1676 174 3 76 chr15 45208089 45208443 -58286531 - ORR1A4 LTR MaLR 0 329 2 3 929 787 358 40 38 chr15 45208443 45208755 -58286219 - Lx8 LINE L1 -517 6956 6650 3 929 29 0 0 0 chr15 45208755 45208784 -58286190 + AT_rich Low_complexity Low_complexity 1 29 0 3 929 2848 82 5 0 chr15 45208784 45209161 -58285813 - L1_Mus1 LINE L1 -6 6561 6183 3 929 258 256 22 65 chr15 45209165 45209257 -58285717 - Lx8 LINE L1 -807 6666 6579 3 929 784 183 113 47 chr15 45209369 45209581 -58285393 + URR1A DNA MER1_type 1 226 0 3 929 226 253 157 22 chr15 45210183 45210272 -58284702 + LTR40a LTR ERVL 80 180 -339 3 929 333 200 86 32 chr15 45210300 45210393 -58284581 - RMER20A LTR ERVK -25 602 505 3 929 378 338 53 57 chr15 45210659 45211011 -58283963 - RLTR17 LTR ERVK -259 433 32 3 929 365 264 125 51 chr15 45211040 45211334 -58283640 - RMER20A LTR ERVK -82 545 211 3 929 234 259 86 0 chr15 45212109 45212167 -58282807 - L2 LINE L2 -595 2824 2762 3 929 576 120 32 26 chr15 45212557 45212711 -58282263 + (TCTA)n Simple_repeat Simple_repeat 4 158 0 3 929 496 362 56 18 chr15 45215517 45215801 -58279173 - MLT1A0 LTR MaLR -33 332 38 3 929 1456 80 14 5 chr15 45215818 45216031 -58278943 - L1_Mus3 LINE L1 -7 6631 6417 3 929 186 71 0 0 chr15 45217593 45217621 -58277353 + (GGGAGA)n Simple_repeat Simple_repeat 4 31 0 3 929 258 32 0 0 chr15 45218351 45218382 -58276592 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 929 227 300 0 0 chr15 45218888 45218948 -58276026 + Lx6 LINE L1 6600 6659 -801 3 929 32 43 0 0 chr15 45219618 45219664 -58275310 + AT_rich Low_complexity Low_complexity 1 46 0 3 930 14462 26 0 0 chr15 45219902 45222275 -58272699 - L1Md_T LINE L1 0 6582 4210 3 930 497 179 47 0 chr15 45222272 45222378 -58272596 + Lx4B LINE L1 6173 6283 -775 3 930 1142 62 7 0 chr15 45222379 45222523 -58272451 + B1_Mus1 SINE Alu 4 148 0 3 930 480 18 0 0 chr15 45222529 45222586 -58272388 + (A)n Simple_repeat Simple_repeat 1 57 0 3 930 5915 44 1 12 chr15 45222586 45223313 -58271661 + L1Md_F2 LINE L1 5842 6560 -22 3 930 180 0 0 0 chr15 45223313 45223333 -58271641 + (TA)n Simple_repeat Simple_repeat 1 20 0 3 930 312 48 0 0 chr15 45223368 45223410 -58271564 + (GAAAA)n Simple_repeat Simple_repeat 2 43 0 3 930 3947 193 8 22 chr15 45223410 45224210 -58270764 + Lx4B LINE L1 6271 7058 0 3 930 24 32 0 0 chr15 45224307 45224338 -58270636 + AT_rich Low_complexity Low_complexity 1 31 0 3 930 255 79 0 0 chr15 45225148 45225186 -58269788 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 930 24 0 0 0 chr15 45225789 45225813 -58269161 + AT_rich Low_complexity Low_complexity 1 24 0 3 930 456 330 78 21 chr15 45225927 45226119 -58268855 - MER54A LTR ERVL -627 274 72 3 930 7667 63 9 1 chr15 45226441 45227500 -58267474 - L1Md_F2 LINE L1 0 6582 5513 3 930 251 188 0 0 chr15 45227516 45227564 -58267410 - Lx7 LINE L1 -1978 5718 5671 3 930 1763 299 63 11 chr15 45227555 45228878 -58266096 + Lx5 LINE L1 5769 7441 -19 3 930 329 335 171 0 chr15 45230617 45230775 -58264199 + MER5A DNA MER1_type 4 188 -1 3 930 286 359 47 0 chr15 45231018 45231124 -58263850 + PB1D7 SINE Alu 8 118 -2 3 930 267 31 0 0 chr15 45231125 45231157 -58263817 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 3 930 26 0 0 0 chr15 45231994 45232020 -58262954 + AT_rich Low_complexity Low_complexity 1 26 0 3 930 222 264 109 0 chr15 45232313 45232408 -58262566 - MIRc SINE MIR -116 152 49 3 930 276 30 0 0 chr15 45232683 45232716 -58262258 + (A)n Simple_repeat Simple_repeat 1 33 0 3 930 1147 58 0 0 chr15 45232726 45232865 -58262109 + B1_Mus1 SINE Alu 2 140 -8 3 930 263 28 28 0 chr15 45232866 45232902 -58262072 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 3 930 279 0 0 0 chr15 45233205 45233236 -58261738 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 930 214 294 9 9 chr15 45233236 45233338 -58261636 + A-rich Low_complexity Low_complexity 12 113 0 3 930 2473 270 36 51 chr15 45234796 45236545 -58258429 + Lx6 LINE L1 5366 7430 -30 3 930 3021 74 5 2 chr15 45237581 45237976 -58256998 - MTA_Mm LTR MaLR 0 396 1 3 930 4089 184 85 19 chr15 45238024 45238909 -58256065 - Lx3C LINE L1 -4 6972 6030 3 930 465 224 28 9 chr15 45239049 45239157 -58255817 + Lx6 LINE L1 540 649 -7079 3 930 3442 203 128 49 chr15 45239169 45239325 -58255649 + Lx6 LINE L1 4693 4860 -1020 3 930 423 0 0 0 chr15 45239325 45239372 -58255602 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 930 717 92 0 0 chr15 45239372 45239491 -58255483 + (GA)n Simple_repeat Simple_repeat 2 121 0 3 930 3442 203 128 49 chr15 45239491 45239967 -58255007 + Lx6 LINE L1 4861 5368 -512 3 930 5567 130 14 14 chr15 45239967 45240890 -58254084 + Lx3_Mus LINE L1 6077 6999 -10 3 930 3442 240 98 46 chr15 45240890 45241640 -58253334 + Lx6 LINE L1 5369 6161 -1299 3 930 243 121 29 29 chr15 45241685 45241753 -58253221 + A-rich Low_complexity Low_complexity 3 70 0 3 930 2885 265 66 40 chr15 45241784 45242664 -58252310 + Lx6 LINE L1 6199 7101 -359 3 930 536 81 0 0 chr15 45242652 45242726 -58252248 - MusHAL1 LINE L1 -525 2187 2114 3 930 750 241 81 10 chr15 45242722 45242931 -58252043 - L1VL2 LINE L1 -6049 286 63 3 930 27816 135 11 24 chr15 45242947 45249041 -58245933 - L1_Mus2 LINE L1 -1 6565 522 3 930 201 74 0 0 chr15 45249161 45249188 -58245786 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 3 930 399 56 0 0 chr15 45249209 45249263 -58245711 + (TATG)n Simple_repeat Simple_repeat 2 55 0 3 930 3650 88 0 0 chr15 45249263 45249743 -58245231 - L1_Mus1 LINE L1 -2 6565 6086 3 930 1733 257 10 185 chr15 45249802 45250532 -58244442 - RMER19C LTR ERVK 0 611 10 3 930 396 0 0 0 chr15 45250818 45250862 -58244112 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 930 273 119 0 0 chr15 45250964 45251006 -58243968 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 930 2633 77 0 0 chr15 45251152 45251501 -58243473 - L1_Mus1 LINE L1 -3 6564 6216 3 930 470 306 64 25 chr15 45253954 45254158 -58240816 + L1_Mur3 LINE L1 55 266 -7462 3 930 1373 264 25 48 chr15 45254145 45254582 -58240392 + L1_Mur3 LINE L1 182 608 -7120 3 930 1166 239 14 0 chr15 45254579 45254863 -58240111 + L1_Mur3 LINE L1 3580 3867 -2013 3 930 390 155 0 0 chr15 45254944 45255041 -58239933 + T-rich Low_complexity Low_complexity 1 97 0 3 930 1098 88 0 7 chr15 45255051 45255199 -58239775 - B1_Mm SINE Alu 0 147 1 3 930 21 95 0 0 chr15 45255591 45255654 -58239320 + AT_rich Low_complexity Low_complexity 1 63 0 3 930 21 57 0 0 chr15 45255928 45255963 -58239011 + AT_rich Low_complexity Low_complexity 1 35 0 3 930 1275 295 43 8 chr15 45255989 45256361 -58238613 - MTD LTR MaLR -14 405 21 3 930 935 230 21 30 chr15 45256590 45256823 -58238151 + ORR1D1 LTR MaLR 85 315 -59 3 930 21 0 0 0 chr15 45257332 45257353 -58237621 + AT_rich Low_complexity Low_complexity 1 21 0 3 930 541 346 71 0 chr15 45257811 45258080 -58236894 - B4A SINE B4 -2 290 3 3 930 23 33 0 0 chr15 45258080 45258110 -58236864 + AT_rich Low_complexity Low_complexity 1 30 0 3 930 25 90 0 0 chr15 45258128 45258195 -58236779 + AT_rich Low_complexity Low_complexity 1 67 0 3 930 569 307 57 32 chr15 45258286 45258690 -58236284 - L1M2 LINE L1 -843 5300 4887 3 930 742 260 68 30 chr15 45258797 45259082 -58235892 + Lx7 LINE L1 5523 5847 -1849 3 930 5153 60 6 0 chr15 45259245 45259894 -58235080 - L1Md_F2 LINE L1 -6 6576 5924 3 930 275 56 0 0 chr15 45259894 45259930 -58235044 + Lx LINE L1 5730 5765 -889 3 930 4175 219 46 17 chr15 45262127 45263110 -58231864 - Lx3C LINE L1 -2 6974 5964 3 930 623 241 73 31 chr15 45263111 45263396 -58231578 - RMER19C LTR ERVK -354 257 1 3 930 495 48 0 0 chr15 45263499 45263561 -58231413 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 930 4067 139 61 28 chr15 45264400 45264745 -58230229 - RMER17D2 LTR ERVK 0 809 460 3 930 327 25 0 0 chr15 45264745 45264785 -58230189 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 930 4067 139 61 28 chr15 45264785 45265222 -58229752 - RMER17D2 LTR ERVK -350 459 1 3 930 6675 209 11 10 chr15 45265603 45267474 -58227500 + Lx2B LINE L1 5110 6987 -13 3 930 2806 238 23 54 chr15 45267689 45268510 -58226464 + L1VL4 LINE L1 131 926 -5376 3 930 274 235 71 29 chr15 45268510 45268580 -58226394 - MTB_Mm LTR MaLR -314 93 21 3 930 19930 179 11 60 chr15 45268669 45270298 -58224676 + L1_Mus3 LINE L1 619 2252 -3631 3 930 3143 206 20 38 chr15 45270298 45270949 -58224025 - RLTR26 LTR ERVK -1 641 3 3 930 19930 179 11 60 chr15 45270949 45274455 -58220519 + L1_Mus3 LINE L1 2253 5770 -113 3 930 5187 124 76 28 chr15 45274455 45275319 -58219655 - RMER17A2 LTR ERVK 0 906 1 3 930 19930 106 48 13 chr15 45275319 45276150 -58218824 + L1_Mus3 LINE L1 5771 6637 -1 3 930 933 134 25 0 chr15 45276245 45276402 -58218572 - Lx5 LINE L1 -1253 5797 5637 3 930 728 213 47 37 chr15 45276472 45276609 -58218365 - Lx5 LINE L1 -589 5288 5149 3 930 1854 122 72 0 chr15 45276609 45276913 -58218061 - ORR1A2 LTR MaLR -1 326 1 3 930 728 213 47 37 chr15 45276913 45276965 -58218009 - Lx5 LINE L1 -729 5148 5097 3 930 3914 237 80 25 chr15 45276958 45277996 -58216978 + Lx5 LINE L1 5796 6890 -160 3 930 198 0 0 0 chr15 45278079 45278101 -58216873 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 3 930 668 92 0 0 chr15 45278761 45278848 -58216126 - Lx3_Mus LINE L1 -1259 5750 5664 3 930 8088 110 13 17 chr15 45278848 45280107 -58214867 + Lx3_Mus LINE L1 5756 7009 0 3 930 660 286 47 67 chr15 45280202 45280457 -58214517 - ORR1D1 LTR MaLR 0 384 135 3 930 2918 29 0 0 chr15 45280457 45280807 -58214167 - L1_Mm LINE L1 -2274 3609 3260 3 930 4628 43 0 0 chr15 45280807 45281364 -58213610 + L1Md_T LINE L1 6026 6582 0 3 930 682 257 7 0 chr15 45281370 45281510 -58213464 - ORR1D1 LTR MaLR -233 141 1 3 930 303 104 0 0 chr15 45281544 45281592 -58213382 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 930 280 400 76 24 chr15 45282294 45282545 -58212429 + LTR16A LTR ERVL 85 348 -103 3 930 1537 213 55 14 chr15 45282875 45283223 -58211751 - Lx5 LINE L1 -3 7047 6686 3 930 5616 165 51 9 chr15 45283215 45283600 -58211374 - Lx5 LINE L1 -1099 5951 5539 3 930 3641 52 0 19 chr15 45283600 45284073 -58210901 + L1Md_F2 LINE L1 6119 6582 0 3 930 5616 190 53 11 chr15 45284073 45284985 -58209989 - Lx5 LINE L1 -339 5538 4589 3 930 2349 258 104 50 chr15 45286611 45287495 -58207479 + ORR1C1-int LTR MaLR 1 932 -577 3 930 7060 75 8 1 chr15 45287495 45288422 -58206552 + L1_Mus2 LINE L1 5629 6561 -5 4 930 2684 200 17 34 chr15 45288424 45289013 -58205961 + ORR1C1-int LTR MaLR 931 1509 0 3 930 1170 202 153 24 chr15 45289013 45289307 -58205667 + ORR1C1 LTR MaLR 1 332 -46 3 930 432 0 0 0 chr15 45289307 45289355 -58205619 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 4 930 3126 259 40 10 chr15 45289371 45290304 -58204670 - Lx4B LINE L1 -117 6883 5928 4 930 4532 129 30 7 chr15 45290295 45291007 -58203967 - Lx LINE L1 -331 6323 5596 4 930 320 266 96 72 chr15 45291422 45291681 -58203293 - HAL1-3A_ME LINE L1 -419 2439 2285 4 930 299 239 11 0 chr15 45291681 45291769 -58203205 + CT-rich Low_complexity Low_complexity 3 91 0 4 930 912 87 0 0 chr15 45291769 45291896 -58203078 + (TCCCC)n Simple_repeat Simple_repeat 4 130 0 4 930 345 372 40 13 chr15 45291909 45292059 -58202915 - MTEa LTR MaLR -225 154 1 4 930 1008 122 0 0 chr15 45292443 45292591 -58202383 - B1_Mus1 SINE Alu 0 148 1 4 930 303 28 0 0 chr15 45292671 45292707 -58202267 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 930 189 0 0 0 chr15 45292707 45292727 -58202247 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 930 459 0 0 0 chr15 45294467 45294518 -58200456 + (GA)n Simple_repeat Simple_repeat 2 52 0 4 930 1263 284 33 45 chr15 45295608 45296123 -58198851 + Lx9 LINE L1 6920 7428 -216 4 930 443 290 122 70 chr15 45296131 45296476 -58198498 - Lx9 LINE L1 -195 7449 7087 4 930 3062 182 41 13 chr15 45296480 45296983 -58197991 - L1_Mur2 LINE L1 -730 5147 4633 4 930 216 86 0 0 chr15 45296983 45297018 -58197956 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 930 3062 182 41 13 chr15 45297018 45297148 -58197826 - L1_Mur2 LINE L1 -1245 4632 4496 4 930 921 167 6 0 chr15 45297151 45297319 -58197655 + L1_Mur2 LINE L1 5147 5315 -562 4 930 7535 80 4 4 chr15 45297330 45298613 -58196361 - L1_Mus1 LINE L1 -1 6566 5282 4 930 2133 174 139 0 chr15 45298613 45299044 -58195930 + L1_Mm LINE L1 5307 5797 -86 4 930 2910 210 50 28 chr15 45299045 45299157 -58195817 + L1VL2 LINE L1 66 177 -6158 4 930 2205 148 62 10 chr15 45299157 45299546 -58195428 - RLTR9E LTR ERVK 0 409 1 4 930 2910 210 50 28 chr15 45299546 45300076 -58194898 + L1VL2 LINE L1 178 721 -5614 4 930 7785 184 18 16 chr15 45300068 45300344 -58194630 + L1_Mur1 LINE L1 2523 2800 -3086 4 930 306 0 0 0 chr15 45300344 45300378 -58194596 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 4 930 7785 184 18 16 chr15 45300378 45300430 -58194544 + L1_Mur1 LINE L1 2801 2864 -3022 4 930 582 15 0 0 chr15 45300430 45300497 -58194477 + (GAAA)n Simple_repeat Simple_repeat 3 69 0 4 930 7785 184 18 16 chr15 45300497 45301825 -58193149 + L1_Mur1 LINE L1 2865 4182 -1704 4 930 232 244 63 13 chr15 45302519 45302598 -58192376 + Charlie7 DNA MER1_type 754 836 -1776 4 930 744 305 9 30 chr15 45302978 45303211 -58191763 - ORR1E LTR MaLR -129 230 3 4 930 339 291 56 14 chr15 45303752 45303895 -58191079 - LTR82B Low_complexity ERVL 0 830 682 4 930 402 305 11 39 chr15 45304444 45304642 -58190332 - RMER13A LTR ERVK -4 904 673 4 930 1127 175 19 9 chr15 45304642 45304855 -58190119 - RMER13B LTR ERVK -592 316 102 4 930 688 272 30 0 chr15 45304867 45305036 -58189938 - RLTR26 LTR ERVK -468 174 1 4 930 527 306 33 35 chr15 45305192 45305514 -58189460 - Lx6 LINE L1 -575 6885 6516 4 930 256 224 45 0 chr15 45305599 45305666 -58189308 - Lx9 LINE L1 -1208 6436 6367 4 930 563 335 25 4 chr15 45305676 45305913 -58189061 + Lx9 LINE L1 7230 7471 -173 4 930 395 290 57 14 chr15 45306799 45306939 -58188035 - Lx9 LINE L1 -394 7250 7105 4 930 551 324 49 12 chr15 45306937 45307181 -58187793 - Lx9 LINE L1 -954 6690 6438 4 930 680 221 123 128 chr15 45307690 45308064 -58186910 + MTE2a LTR MaLR 3 374 -5 4 930 22 94 0 0 chr15 45308081 45308145 -58186829 + AT_rich Low_complexity Low_complexity 1 64 0 4 930 1463 99 275 8 chr15 45308147 45308391 -58186583 + RLTR27 LTR ERVK 1 309 0 4 930 330 80 38 0 chr15 45308416 45308469 -58186505 + RLTR10-int LTR ERVK 163 267 -7314 4 930 643 236 62 41 chr15 45308501 45308695 -58186279 + RLTR10-int LTR ERVK 655 852 -1135 4 930 345 255 120 19 chr15 45308792 45308900 -58186074 + RLTR10-int LTR ERVK 797 915 -6765 4 930 4299 312 48 36 chr15 45309061 45311787 -58183187 + IAP-d-int LTR ERVK 673 4396 -3010 4 930 307 298 51 36 chr15 45312485 45312680 -58182294 + RLTR45-int LTR ERVK 169 366 -6878 4 930 1599 201 139 83 chr15 45312813 45313336 -58181638 + RMER16-int LTR ERVK 241 688 -5449 4 930 529 204 88 0 chr15 45313323 45313436 -58181538 + RMER16-int LTR ERVK 938 1060 -5077 4 930 1178 231 62 24 chr15 45313449 45313738 -58181236 + ETnERV2-int LTR ERVK 2454 2753 -4653 4 930 5225 175 64 107 chr15 45313774 45315686 -58179288 + RLTR45-int LTR ERVK 4122 5907 -1337 4 930 791 301 74 15 chr15 45315709 45316033 -58178941 + RNERVK23-int LTR ERVK 7506 7848 -369 4 930 2642 149 10 2 chr15 45316049 45316458 -58178516 + RLTR45-int LTR ERVK 6495 6906 -500 4 930 1976 40 0 4 chr15 45316458 45316708 -58178266 + RLTR10C LTR ERVK 188 436 0 4 930 595 289 57 0 chr15 45318485 45318731 -58176243 - Tigger6a DNA MER2_type -31 1052 793 4 930 299 379 49 5 chr15 45319909 45320113 -58174861 - Tigger6a DNA MER2_type -460 623 411 4 930 303 321 75 0 chr15 45320161 45320267 -58174707 - Tigger6a DNA MER2_type -794 289 176 4 930 591 305 61 12 chr15 45321137 45321457 -58173517 - MTD LTR MaLR 0 419 68 4 930 3018 253 41 11 chr15 45321524 45322276 -58172698 + Lx6 LINE L1 6352 7126 -334 4 930 2349 65 0 61 chr15 45322308 45322651 -58172323 - L1_Mus2 LINE L1 0 6566 6245 4 930 3788 63 16 0 chr15 45322653 45323143 -58171831 + L1_Mus2 LINE L1 5739 6236 -330 4 930 312 244 55 30 chr15 45323140 45323305 -58171669 + Lx7 LINE L1 7382 7550 -146 4 930 893 297 102 54 chr15 45323663 45324143 -58170831 + Lx8 LINE L1 6969 7471 -2 4 930 462 36 0 0 chr15 45324643 45324699 -58170275 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 930 24 32 0 0 chr15 45324960 45324991 -58169983 + AT_rich Low_complexity Low_complexity 1 31 0 4 930 3235 206 72 137 chr15 45325646 45326713 -58168261 + RMER1B Other Other 49 1046 -20 4 930 213 39 0 0 chr15 45326724 45326750 -58168224 + (TTAAG)n Simple_repeat Simple_repeat 1 26 0 4 930 8454 26 0 0 chr15 45326938 45328163 -58166811 - L1Md_T LINE L1 -1 6581 5357 4 930 21 36 0 0 chr15 45329264 45329292 -58165682 + AT_rich Low_complexity Low_complexity 1 28 0 4 930 4775 117 27 22 chr15 45329347 45329529 -58165445 + Lx3B LINE L1 5102 5282 -604 4 930 206 0 69 0 chr15 45329529 45329558 -58165416 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 4 930 6581 159 39 21 chr15 45329558 45331218 -58163756 + Lx3B LINE L1 5283 6973 0 4 930 432 97 0 0 chr15 45331346 45331408 -58163566 + (GAAA)n Simple_repeat Simple_repeat 2 63 0 4 930 950 167 0 6 chr15 45331420 45331601 -58163373 + GA-rich Low_complexity Low_complexity 1 180 0 4 930 28 0 0 0 chr15 45333261 45333289 -58161685 + AT_rich Low_complexity Low_complexity 1 28 0 4 930 524 308 21 5 chr15 45333485 45333671 -58161303 - RMER5 LTR ERV1 -21 513 325 4 930 688 298 88 11 chr15 45333746 45334007 -58160967 - Lx6 LINE L1 0 7460 7180 4 930 256 262 50 0 chr15 45334002 45334082 -58160892 + Lx6 LINE L1 6126 6209 -1251 4 930 3018 248 45 94 chr15 45334110 45335201 -58159773 - Lx9 LINE L1 -8 7636 6600 4 930 336 314 16 40 chr15 45335484 45335610 -58159364 - B3 SINE B2 -3 213 91 4 930 23 68 0 0 chr15 45335675 45335719 -58159255 + AT_rich Low_complexity Low_complexity 1 44 0 4 930 387 0 0 0 chr15 45336020 45336063 -58158911 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 930 21 36 0 0 chr15 45336639 45336667 -58158307 + AT_rich Low_complexity Low_complexity 1 28 0 4 930 581 13 13 0 chr15 45336861 45336938 -58158036 - L1Md_T LINE L1 0 6582 6505 4 930 759 355 33 22 chr15 45337553 45338002 -58156972 - Lx8 LINE L1 -153 7320 6867 4 930 206 375 57 16 chr15 45338126 45338248 -58156726 - L2a LINE L2 -22 3404 3278 4 930 23 68 0 0 chr15 45338628 45338672 -58156302 + AT_rich Low_complexity Low_complexity 1 44 0 4 930 22 35 0 0 chr15 45339235 45339264 -58155710 + AT_rich Low_complexity Low_complexity 1 29 0 4 930 458 298 38 15 chr15 45339448 45339581 -58155393 + ID_B1 SINE B4 80 215 -9 4 930 492 101 22 11 chr15 45339961 45340051 -58154923 + (TA)n Simple_repeat Simple_repeat 1 91 0 4 930 228 94 0 0 chr15 45340216 45340248 -58154726 + L1M2 LINE L1 5564 5595 -717 4 930 218 32 0 31 chr15 45342090 45342122 -58152852 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 4 930 207 0 0 0 chr15 45342304 45342327 -58152647 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4 930 522 50 0 12 chr15 45342529 45342610 -58152364 + L1Md_F3 LINE L1 6491 6570 -14 4 930 2053 137 17 28 chr15 45343733 45344094 -58150880 - Lx3A LINE L1 0 6981 6625 4 930 216 0 0 0 chr15 45344274 45344298 -58150676 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 930 495 48 0 0 chr15 45344298 45344359 -58150615 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 930 539 84 12 0 chr15 45344384 45344467 -58150507 + L1_Mus2 LINE L1 6483 6566 0 4 930 532 327 44 29 chr15 45344472 45344746 -58150228 - Lx9 LINE L1 -235 7409 7132 4 930 1827 246 110 81 chr15 45345126 45345735 -58149239 + RMER20B LTR ERVK 1 627 0 4 930 444 37 0 0 chr15 45345735 45345789 -58149185 + (TCCA)n Simple_repeat Simple_repeat 4 57 0 4 930 656 300 94 97 chr15 45346002 45346364 -58148610 + MTE2a LTR MaLR 19 379 0 4 930 378 42 0 0 chr15 45346843 45346891 -58148083 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 930 185 65 0 31 chr15 45346956 45346988 -58147986 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 930 468 0 0 0 chr15 45347464 45347516 -58147458 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 4 930 22 56 0 0 chr15 45348304 45348340 -58146634 + AT_rich Low_complexity Low_complexity 1 36 0 4 930 666 47 0 0 chr15 45348416 45348502 -58146472 + (TC)n Simple_repeat Simple_repeat 1 86 0 4 930 508 335 37 7 chr15 45348608 45348799 -58146175 - Lx9 LINE L1 -272 7372 7047 4 930 1031 106 50 6 chr15 45348811 45348972 -58146002 + B2_Mm2 SINE B2 21 188 -7 4 930 27 62 0 0 chr15 45349121 45349169 -58145805 + AT_rich Low_complexity Low_complexity 1 48 0 4 930 266 339 0 0 chr15 45349280 45349339 -58145635 + ID2 SINE ID 9 67 -16 4 116 8425 172 18 2 chr15 45349468 45351885 -58143089 + Lx2B LINE L1 4273 6723 -277 4 931 525 136 76 8 chr15 45351885 45352004 -58142970 + Lx2B LINE L1 6870 6996 -4 4 931 651 141 8 15 chr15 45352142 45352272 -58142702 - L1Md_F2 LINE L1 -1 6581 6453 4 931 258 111 0 0 chr15 45352670 45352706 -58142268 + U2 snRNA snRNA 1 36 -152 5 931 255 246 18 0 chr15 45353540 45353597 -58141377 + Tigger7 DNA MER2_type 2180 2237 -254 5 931 341 290 91 12 chr15 45353620 45353782 -58141192 + L1MA4A LINE L1 5691 5930 -373 5 931 248 363 102 8 chr15 45353998 45354172 -58140802 + Tigger7 DNA MER2_type 2220 2413 -78 5 931 501 17 0 0 chr15 45354172 45354230 -58140744 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 931 248 363 102 8 chr15 45354230 45354291 -58140683 + Tigger7 DNA MER2_type 2414 2477 -14 5 931 823 357 88 38 chr15 45355892 45356367 -58138607 + MLT2B3 LTR ERVL 9 507 -47 5 931 237 33 0 0 chr15 45356530 45356560 -58138414 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 931 785 76 8 0 chr15 45356560 45356677 -58138297 + (GA)n Simple_repeat Simple_repeat 1 119 0 5 931 265 298 106 0 chr15 45356686 45356837 -58138137 - L1M2 LINE L1 -787 5504 5338 5 931 21 0 0 0 chr15 45356998 45357019 -58137955 + AT_rich Low_complexity Low_complexity 1 21 0 5 931 427 336 1 10 chr15 45358357 45358475 -58136499 - B4A SINE B4 -164 128 12 5 931 324 0 0 0 chr15 45358504 45358540 -58136434 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 931 180 0 0 0 chr15 45358715 45358735 -58136239 + (T)n Simple_repeat Simple_repeat 1 20 0 5 931 264 311 38 19 chr15 45358741 45358846 -58136128 + B4A SINE B4 159 265 -27 5 931 432 0 0 0 chr15 45358876 45358924 -58136050 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 931 22 35 0 0 chr15 45359029 45359058 -58135916 + AT_rich Low_complexity Low_complexity 1 29 0 5 931 3205 160 154 102 chr15 45359105 45359962 -58135012 + RMER17A2 LTR ERVK 1 902 -4 5 931 342 0 0 0 chr15 45359968 45360006 -58134968 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 931 15247 138 19 11 chr15 45360011 45362077 -58132897 - Lx3A LINE L1 -3 6978 4893 5 931 3706 140 128 12 chr15 45362077 45362447 -58132527 + RMER17D2 LTR ERVK 1 431 -378 5 931 564 15 0 0 chr15 45362447 45362512 -58132462 + (TC)n Simple_repeat Simple_repeat 2 66 0 5 931 3706 140 128 12 chr15 45362512 45362866 -58132108 + RMER17D2 LTR ERVK 432 809 0 5 931 15247 120 11 5 chr15 45362866 45364273 -58130701 - Lx3A LINE L1 -994 4892 3480 5 931 13821 98 58 34 chr15 45364273 45366889 -58128085 + Lx3A LINE L1 782 3461 -2425 5 931 189 182 0 0 chr15 45368705 45368760 -58126214 + T-rich Low_complexity Low_complexity 1 55 0 5 931 4379 6 8 0 chr15 45368798 45369287 -58125687 + MT2_Mm LTR ERVL 1 493 0 5 931 290 303 0 0 chr15 45369884 45369950 -58125024 - ID4_ SINE ID -11 72 7 5 931 1313 152 15 12 chr15 45370302 45370561 -58124413 + Lx2 LINE L1 6733 6992 -5 5 931 249 33 0 0 chr15 45370654 45370684 -58124290 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 931 372 22 0 0 chr15 45370725 45370770 -58124204 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 5 931 189 0 111 0 chr15 45371661 45371697 -58123277 + (TTTTG)n Simple_repeat Simple_repeat 5 44 0 5 931 1020 105 0 0 chr15 45371703 45371846 -58123128 - B1_Mus2 SINE Alu -3 144 2 5 931 739 318 56 36 chr15 45371906 45372297 -58122677 - Lx7 LINE L1 -689 7007 6609 5 931 426 334 126 46 chr15 45373375 45373748 -58121226 - Lx8 LINE L1 -4 7469 7067 5 931 256 348 15 7 chr15 45373844 45373980 -58120994 - Lx8 LINE L1 -985 6488 6352 5 931 345 235 26 9 chr15 45373977 45374093 -58120881 + Lx6 LINE L1 1942 2059 -3821 5 931 466 16 32 0 chr15 45374100 45374163 -58120811 + (CA)n Simple_repeat Simple_repeat 1 65 0 5 931 5269 226 66 26 chr15 45374173 45374550 -58120424 + Lx6 LINE L1 4289 4665 -1215 5 931 2254 67 102 9 chr15 45374550 45374884 -58120090 + L1_Mus1 LINE L1 6203 6567 0 5 931 5269 226 66 26 chr15 45374884 45374900 -58120074 + Lx6 LINE L1 4666 4673 -1207 5 931 315 0 0 0 chr15 45374900 45374935 -58120039 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 5 931 5986 256 61 16 chr15 45374935 45377526 -58117448 + Lx6 LINE L1 4674 7397 -63 5 931 543 295 24 6 chr15 45377575 45377742 -58117232 - Lx9 LINE L1 -1136 6508 6339 5 931 2577 169 35 37 chr15 45378039 45378427 -58116547 - L1_Mur2 LINE L1 -354 5523 5136 5 931 4315 95 10 0 chr15 45378427 45379029 -58115945 - L1_Mus2 LINE L1 0 6566 5959 5 931 2577 169 35 37 chr15 45379029 45379181 -58115793 - L1_Mur2 LINE L1 -742 5135 4984 5 931 589 160 0 0 chr15 45379174 45379274 -58115700 + Lx4B LINE L1 5543 5642 -235 5 931 243 240 90 97 chr15 45379274 45379408 -58115566 + Zaphod DNA Tip100 1728 1860 -2171 5 931 5757 188 57 36 chr15 45379416 45380645 -58114329 + Lx4B LINE L1 5800 7054 -4 5 931 29 60 0 0 chr15 45380927 45380977 -58113997 + AT_rich Low_complexity Low_complexity 1 50 0 5 931 214 111 55 18 chr15 45381039 45381094 -58113880 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 931 709 239 87 25 chr15 45381285 45381560 -58113414 + Lx9 LINE L1 7353 7644 0 5 931 7931 142 54 0 chr15 45383837 45385478 -58109496 - Lx2 LINE L1 0 6997 5273 5 931 698 258 92 0 chr15 45385553 45385782 -58109192 - Lx9 LINE L1 -391 7253 7004 5 931 544 281 66 17 chr15 45385798 45385979 -58108995 + Lx9 LINE L1 7281 7470 -174 5 931 1844 233 158 32 chr15 45386093 45386303 -58108671 + Lx3A LINE L1 5174 5380 -497 5 931 378 42 0 0 chr15 45386303 45386351 -58108623 + (TTA)n Simple_repeat Simple_repeat 1 48 0 5 931 1182 148 9 36 chr15 45386351 45386575 -58108399 - Lx3A LINE L1 -15 6966 6749 5 931 6758 128 99 7 chr15 45386575 45387837 -58107137 + Lx3A LINE L1 5389 6759 -222 5 931 1095 102 0 0 chr15 45387944 45388091 -58106883 + B1_Mus2 SINE Alu 1 147 0 5 931 354 23 0 0 chr15 45388148 45388191 -58106783 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 931 21 0 0 0 chr15 45388273 45388294 -58106680 + AT_rich Low_complexity Low_complexity 1 21 0 5 931 183 355 109 29 chr15 45388323 45388512 -58106462 + L2 LINE L2 2295 2517 -902 5 931 22 0 0 0 chr15 45388512 45388534 -58106440 + AT_rich Low_complexity Low_complexity 1 22 0 5 931 183 355 109 29 chr15 45388534 45388561 -58106413 + L2 LINE L2 2518 2551 -868 5 931 922 303 128 24 chr15 45388681 45389016 -58105958 + MTE2a LTR MaLR 1 370 -9 5 931 313 364 70 10 chr15 45389072 45389272 -58105702 - Lx8 LINE L1 -9 7464 7253 5 931 2559 189 78 48 chr15 45389533 45390195 -58104779 - RMER6C LTR ERVK 0 690 9 5 931 1187 213 44 8 chr15 45390508 45390956 -58104018 - Lx5 LINE L1 -705 6345 5835 5 931 467 47 0 0 chr15 45390956 45391073 -58103901 - L1Md_F3 LINE L1 0 6584 6501 5 931 253 125 42 0 chr15 45391078 45391126 -58103848 - Lx5 LINE L1 -1209 5841 5792 5 931 567 182 0 0 chr15 45391126 45391247 -58103727 + CT-rich Low_complexity Low_complexity 2 122 0 5 931 392 142 2 40 chr15 45391247 45391345 -58103629 - Lx5 LINE L1 -1182 5791 5692 5 931 25316 82 36 5 chr15 45391439 45395951 -58099023 - L1Md_F LINE L1 -817 5066 411 5 931 530 342 38 0 chr15 45396143 45396327 -58098647 + B3 SINE B2 26 216 0 5 931 2100 295 25 24 chr15 45396347 45396361 -58098613 - Lx5 LINE L1 -1 7459 7446 5 931 1344 121 5 5 chr15 45396361 45396577 -58098397 + Lx3_Mus LINE L1 6794 7009 0 5 931 2100 295 25 24 chr15 45396577 45397190 -58097784 - Lx5 LINE L1 -15 7445 6831 5 931 215 122 20 0 chr15 45397571 45397620 -58097354 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 931 473 47 16 0 chr15 45397630 45397694 -58097280 + (GGGAGA)n Simple_repeat Simple_repeat 6 70 0 5 931 1501 242 65 22 chr15 45397710 45398112 -58096862 - MTC LTR MaLR 0 421 3 5 931 2209 147 46 0 chr15 45398483 45398831 -58096143 - Lx LINE L1 -373 6281 5918 5 931 459 0 0 0 chr15 45398942 45398993 -58095981 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 931 375 98 0 0 chr15 45399081 45399142 -58095832 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 931 24 91 0 0 chr15 45399154 45399220 -58095754 + AT_rich Low_complexity Low_complexity 1 66 0 5 931 198 0 0 0 chr15 45399474 45399496 -58095478 + (TTA)n Simple_repeat Simple_repeat 2 23 0 5 931 6324 207 25 38 chr15 45399496 45400975 -58093999 - Lx3C LINE L1 -13 6963 5504 5 931 414 221 53 99 chr15 45400978 45401149 -58093825 - RNLTR23 LTR ERVK -4 638 476 5 931 10415 174 14 6 chr15 45401467 45403433 -58091541 - Lx3C LINE L1 -371 5506 3524 5 931 6280 215 52 9 chr15 45403511 45405373 -58089601 - Lx5 LINE L1 -508 6542 4583 5 931 423 0 0 0 chr15 45405373 45405420 -58089554 + (TAA)n Simple_repeat Simple_repeat 2 48 0 5 931 6280 206 62 7 chr15 45405420 45405675 -58089299 - Lx5 LINE L1 -1295 4582 4326 5 931 6724 176 47 18 chr15 45405668 45405768 -58089206 - Lx5 LINE L1 -2395 3482 3376 5 931 558 0 0 0 chr15 45405768 45405830 -58089144 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 931 6724 176 47 18 chr15 45405830 45407114 -58087860 - Lx5 LINE L1 -2502 3375 2057 5 931 324 48 0 0 chr15 45407114 45407156 -58087818 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 931 6724 176 47 18 chr15 45407156 45407278 -58087696 - Lx5 LINE L1 -3821 2056 1933 5 931 4102 77 0 29 chr15 45407821 45408407 -58086567 + L1Md_Gf LINE L1 254 822 -5700 5 931 17191 22 1 1 chr15 45408428 45410440 -58084534 + L1_Mm LINE L1 3576 5586 -297 5 931 8466 32 0 0 chr15 45410440 45411436 -58083538 + L1Md_T LINE L1 5587 6582 0 5 931 17191 22 1 1 chr15 45411436 45411448 -58083526 + L1_Mm LINE L1 5587 5598 -285 5 931 414 39 0 0 chr15 45411909 45411961 -58083013 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 931 410 158 68 68 chr15 45411962 45412022 -58082952 + B2_Mm2 SINE B2 48 107 -88 5 931 1714 220 94 7 chr15 45412022 45412448 -58082526 + RLTR11A2 LTR ERVK 3 465 -62 5 931 256 283 112 15 chr15 45412716 45412867 -58082107 - MLT1A LTR MaLR -202 163 1 5 931 183 80 0 0 chr15 45413390 45413415 -58081559 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 5 931 421 321 95 0 chr15 45413416 45413584 -58081390 - Lx6 LINE L1 -4 7456 7273 5 931 556 191 0 0 chr15 45413631 45413725 -58081249 + Lx7 LINE L1 6801 6894 -802 5 931 2440 229 48 106 chr15 45413765 45414541 -58080433 - Lx7 LINE L1 -207 7489 6759 5 931 2401 18 4 0 chr15 45414561 45414840 -58080134 - L1Md_T LINE L1 -650 5932 5653 5 931 2008 22 0 0 chr15 45414839 45415067 -58079907 + L1Md_T LINE L1 5960 6187 -395 5 931 37929 30 1 0 chr15 45415067 45422145 -58072829 - L1Md_T LINE L1 0 6585 1 5 931 3403 45 0 2 chr15 45422145 45422564 -58072410 + L1Md_T LINE L1 6165 6582 0 5 931 2466 259 56 28 chr15 45422611 45423358 -58071616 - Lx7 LINE L1 -1007 6689 5922 5 931 432 0 0 0 chr15 45424120 45424168 -58070806 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 931 327 85 0 0 chr15 45424306 45424353 -58070621 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 931 330 115 0 0 chr15 45425469 45425521 -58069453 + (TATG)n Simple_repeat Simple_repeat 1 52 0 5 931 21 36 0 0 chr15 45426067 45426095 -58068879 + AT_rich Low_complexity Low_complexity 1 28 0 5 931 24 53 0 0 chr15 45426211 45426249 -58068725 + AT_rich Low_complexity Low_complexity 1 38 0 5 931 39 68 0 0 chr15 45427305 45427379 -58067595 + AT_rich Low_complexity Low_complexity 1 74 0 5 931 21 36 0 0 chr15 45428365 45428393 -58066581 + AT_rich Low_complexity Low_complexity 1 28 0 5 931 23 33 0 0 chr15 45428587 45428617 -58066357 + AT_rich Low_complexity Low_complexity 1 30 0 5 931 2451 4 0 0 chr15 45428893 45429166 -58065808 + L1Md_A LINE L1 6310 6582 0 5 931 236 204 37 0 chr15 45429219 45429273 -58065701 + Tigger7 DNA MER2_type 365 420 -2071 5 931 612 332 99 11 chr15 45429680 45430044 -58064930 + RMER20B LTR ERVK 129 516 0 5 931 1624 326 42 30 chr15 45430223 45431001 -58063973 - Lx8 LINE L1 -317 7156 6369 5 931 438 282 26 0 chr15 45431004 45431121 -58063853 - ORR1D2 LTR MaLR 0 370 251 5 931 227 204 62 41 chr15 45431632 45431729 -58063245 + GA-rich Low_complexity Low_complexity 1 99 0 6 931 436 326 28 6 chr15 45431784 45431966 -58063008 - Lx8 LINE L1 -1119 6354 6169 5 931 6057 69 20 33 chr15 45432784 45433633 -58061341 + L1Md_F2 LINE L1 5745 6582 0 6 931 595 312 145 31 chr15 45434327 45434544 -58060430 + B4A SINE B4 33 278 -14 6 931 387 41 0 0 chr15 45434544 45434593 -58060381 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 931 23 54 0 0 chr15 45435048 45435085 -58059889 + AT_rich Low_complexity Low_complexity 1 37 0 6 931 534 98 0 0 chr15 45435651 45435733 -58059241 + (CA)n Simple_repeat Simple_repeat 1 82 0 6 931 674 142 82 47 chr15 45435804 45435974 -58059000 - L1_Mur3 LINE L1 -3639 2241 2066 6 931 7651 55 1 7 chr15 45436024 45437158 -58057816 - L1Md_F2 LINE L1 -12 6570 5447 6 931 32109 67 4 11 chr15 45437153 45439145 -58055829 - L1Md_T LINE L1 -1 6581 4650 6 931 1638 72 9 0 chr15 45439145 45439366 -58055608 - L1Md_T LINE L1 0 6582 6360 6 931 32109 92 7 17 chr15 45439366 45443653 -58051321 - L1Md_T LINE L1 -1234 4649 366 6 931 1137 215 34 24 chr15 45443687 45443978 -58050996 - L1_Mur3 LINE L1 -3869 2011 1718 6 931 3744 265 74 12 chr15 45443974 45445096 -58049878 - L1_Mur3 LINE L1 -6482 1246 55 6 931 855 281 36 7 chr15 45445213 45445468 -58049506 + ORR1D1 LTR MaLR 1 276 -83 6 931 309 26 0 0 chr15 45445471 45445509 -58049465 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 6 931 195 152 0 0 chr15 45445542 45445588 -58049386 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 6 931 25 31 0 0 chr15 45445955 45445987 -58048987 + AT_rich Low_complexity Low_complexity 1 32 0 6 931 211 220 0 0 chr15 45446034 45446084 -58048890 + T-rich Low_complexity Low_complexity 1 50 0 6 931 449 329 83 111 chr15 45446132 45446519 -58048455 - MTEa LTR MaLR 0 379 4 6 931 217 132 0 0 chr15 45446571 45446609 -58048365 + (A)n Simple_repeat Simple_repeat 1 38 0 6 931 215 221 25 25 chr15 45446650 45446729 -58048245 + A-rich Low_complexity Low_complexity 1 79 0 6 931 604 301 15 5 chr15 45446815 45447012 -58047962 + L1_Rod LINE L1 5531 5729 -118 6 931 547 340 78 26 chr15 45447011 45447395 -58047579 + Lx9 LINE L1 6529 6932 -712 6 931 663 241 68 23 chr15 45447414 45447573 -58047401 - Lx9 LINE L1 0 7644 7486 6 931 335 23 23 0 chr15 45447573 45447617 -58047357 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 931 663 241 68 23 chr15 45447617 45447720 -58047254 - Lx9 LINE L1 -159 7485 7370 6 931 497 274 67 67 chr15 45447718 45447957 -58047017 + Lx9 LINE L1 6953 7191 -453 6 931 3611 168 24 11 chr15 45448006 45449194 -58045780 + L1VL4 LINE L1 217 1423 -2136 6 931 6357 166 13 17 chr15 45449192 45450481 -58044493 + L1_Mus4 LINE L1 2693 3976 -1907 6 931 6840 133 6 3 chr15 45450468 45451352 -58043622 + L1_Mus4 LINE L1 5453 6340 -296 6 931 435 19 0 0 chr15 45451352 45451404 -58043570 + (CCA)n Simple_repeat Simple_repeat 1 52 0 6 931 6840 129 6 4 chr15 45451404 45451698 -58043276 + L1_Mus4 LINE L1 6341 6632 -4 6 931 468 99 0 0 chr15 45452491 45452562 -58042412 + (CA)n Simple_repeat Simple_repeat 2 72 0 6 931 21 57 0 0 chr15 45453245 45453280 -58041694 + AT_rich Low_complexity Low_complexity 1 35 0 6 931 607 327 68 47 chr15 45453327 45453987 -58040987 - L1MC LINE L1 -2178 3968 3291 6 931 485 337 14 8 chr15 45454125 45454303 -58040671 - B3A SINE B2 -34 182 5 6 931 339 269 44 15 chr15 45454308 45454444 -58040530 - L1M4 LINE L1 -822 5324 5185 6 931 1438 282 15 9 chr15 45454525 45454868 -58040106 - Lx5 LINE L1 -134 6916 6572 6 931 1125 102 0 0 chr15 45454868 45455015 -58039959 + B1_Mus2 SINE Alu 1 147 0 6 931 2123 266 35 34 chr15 45455015 45455656 -58039318 - Lx5 LINE L1 -509 6951 6050 6 931 428 163 0 8 chr15 45455878 45456008 -58038966 + (TCTCTG)n Simple_repeat Simple_repeat 4 132 0 6 931 243 0 0 0 chr15 45456008 45456035 -58038939 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 931 263 267 48 40 chr15 45456049 45456174 -58038800 - RLTR15 LTR ERVK -229 130 5 6 931 2148 162 11 0 chr15 45456184 45456560 -58038414 - Lx5 LINE L1 -1040 6010 5631 6 931 1317 212 92 6 chr15 45456565 45456892 -58038082 + RLTR15 LTR ERVK 3 357 -2 6 931 918 148 0 0 chr15 45456998 45457160 -58037814 + (GAAA)n Simple_repeat Simple_repeat 2 163 0 6 931 279 290 0 0 chr15 45457630 45457692 -58037282 + B1_Mur4 SINE Alu 37 98 -52 6 931 921 189 123 32 chr15 45457804 45458088 -58036886 + MYSERV6-int LTR ERVK 6403 6712 -2247 6 931 301 264 22 88 chr15 45458093 45458230 -58036744 + RLTR18-int LTR ERVK 4722 4849 -512 6 931 392 301 8 58 chr15 45458671 45458791 -58036183 + B1_Mur3 SINE Alu 19 132 -17 6 931 1966 93 33 0 chr15 45458791 45459061 -58035913 - L1_Mus4 LINE L1 -269 6367 6089 6 931 1394 91 0 5 chr15 45459057 45459255 -58035719 + MusHAL1 LINE L1 1545 1741 -971 6 931 226 312 57 82 chr15 45459255 45459377 -58035597 + LTR90B LTR LTR 573 691 -105 6 931 516 249 123 36 chr15 45459414 45459772 -58035202 - L1MCa LINE L1 -4996 1512 1124 6 931 414 307 93 10 chr15 45459780 45459974 -58035000 - L1MCa LINE L1 -5487 1021 812 6 931 270 163 0 0 chr15 45460231 45460280 -58034694 - L1MCa LINE L1 -5801 707 659 6 931 24 32 0 0 chr15 45460416 45460447 -58034527 + AT_rich Low_complexity Low_complexity 1 31 0 6 931 755 321 119 19 chr15 45460588 45460906 -58034068 + MTD LTR MaLR 56 405 -14 6 931 205 297 0 39 chr15 45460994 45461071 -58033903 + CT-rich Low_complexity Low_complexity 3 76 0 6 931 495 60 0 0 chr15 45461077 45461144 -58033830 + (TC)n Simple_repeat Simple_repeat 2 68 0 6 931 333 302 77 31 chr15 45462384 45462514 -58032460 - B1F1 SINE Alu -9 140 5 6 931 55 0 0 0 chr15 45463032 45463087 -58031887 + AT_rich Low_complexity Low_complexity 1 55 0 6 931 4883 178 30 15 chr15 45463294 45464223 -58030751 - RMER17B LTR ERVK -12 946 4 6 931 28 29 0 0 chr15 45464835 45464870 -58030104 + AT_rich Low_complexity Low_complexity 1 35 0 6 931 22 0 0 0 chr15 45466762 45466784 -58028190 + AT_rich Low_complexity Low_complexity 1 22 0 6 931 254 268 121 0 chr15 45466913 45467029 -58027945 - PB1D9 SINE Alu -7 142 2 6 931 36899 15 0 93 chr15 45467052 45469027 -58025947 - L1Md_A LINE L1 -1 6581 4638 6 931 2366 48 9 6 chr15 45469027 45469344 -58025630 + RLTR10 LTR ERVK 1 318 -72 6 931 36899 15 0 93 chr15 45469344 45469365 -58025609 - L1Md_A LINE L1 -1945 4637 4618 6 931 266 159 0 31 chr15 45469365 45469430 -58025544 + RLTR10 LTR ERVK 259 321 -69 6 931 36899 15 0 93 chr15 45469430 45469453 -58025521 - L1Md_A LINE L1 -1965 4617 4596 6 931 992 94 25 18 chr15 45469453 45469616 -58025358 + RLTR10 LTR ERVK 227 390 0 6 931 36899 15 0 93 chr15 45469616 45473816 -58021158 - L1Md_A LINE L1 -1 4595 456 6 931 23 0 0 0 chr15 45475001 45475024 -58019950 + AT_rich Low_complexity Low_complexity 1 23 0 6 931 224 82 93 12 chr15 45475481 45475567 -58019407 + (TATAA)n Simple_repeat Simple_repeat 4 96 0 6 931 2456 192 135 15 chr15 45476116 45476791 -58018183 - RMER6A LTR ERVK 0 756 1 6 931 699 204 280 7 chr15 45477267 45477552 -58017422 - ORR1B1 LTR MaLR 0 367 5 6 931 387 0 0 0 chr15 45477553 45477596 -58017378 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 931 241 206 9 38 chr15 45478524 45478630 -58016344 + CT-rich Low_complexity Low_complexity 2 104 0 6 931 315 257 0 0 chr15 45478819 45478889 -58016085 + L1_Mur3 LINE L1 5367 5436 -444 6 931 270 310 144 25 chr15 45478942 45479144 -58015830 + L1_Mur1 LINE L1 5363 5588 -298 6 931 369 43 0 0 chr15 45479384 45479431 -58015543 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 931 387 307 55 11 chr15 45479775 45479956 -58015018 + Lx9 LINE L1 5745 5933 -1711 6 931 2977 190 45 6 chr15 45480149 45480778 -58014196 - L1_Mur2 LINE L1 -205 5672 5020 6 931 1026 55 6 110 chr15 45480787 45480951 -58014023 - B1_Mus1 SINE Alu -1 147 1 6 116 7819 72 15 32 chr15 45480967 45482425 -58012549 - L1Md_F2 LINE L1 -4 6578 5102 6 932 279 0 0 0 chr15 45482425 45482456 -58012518 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 932 6727 120 12 96 chr15 45482456 45483065 -58011909 - L1Md_F2 LINE L1 -782 5101 4620 6 932 7704 140 31 11 chr15 45483054 45483198 -58011776 + Lx2 LINE L1 5697 5841 -1156 6 932 1343 84 16 10 chr15 45483198 45483390 -58011584 + B2_Mm1t SINE B2 1 193 0 6 932 7704 140 31 11 chr15 45483390 45484521 -58010453 + Lx2 LINE L1 5842 6997 0 6 932 186 43 0 0 chr15 45484525 45484548 -58010426 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 6 932 410 413 78 16 chr15 45486100 45486358 -58008616 - B4 SINE B4 -16 276 3 6 932 332 116 47 0 chr15 45486953 45487039 -58007935 + (TA)n Simple_repeat Simple_repeat 2 91 0 6 932 1090 88 0 7 chr15 45487120 45487269 -58007705 + B1_Mus1 SINE Alu 1 148 0 6 932 27 0 0 0 chr15 45487281 45487308 -58007666 + AT_rich Low_complexity Low_complexity 1 27 0 6 932 230 386 12 12 chr15 45487574 45487658 -58007316 - PB1D10 SINE Alu -29 88 5 6 932 344 355 95 43 chr15 45487791 45488044 -58006930 + L1MC1 LINE L1 5843 6108 -225 6 932 355 254 70 35 chr15 45488100 45488214 -58006760 - Lx7 LINE L1 -469 7227 7110 6 932 535 265 7 20 chr15 45488228 45488365 -58006609 + Lx7 LINE L1 7220 7354 -342 6 932 963 121 17 11 chr15 45488365 45488541 -58006433 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 6 932 535 265 7 20 chr15 45488541 45488553 -58006421 + Lx7 LINE L1 7355 7366 -330 6 932 1140 266 50 14 chr15 45488601 45488883 -58006091 - Lx5 LINE L1 -40 7010 6719 6 932 1222 121 112 0 chr15 45488883 45489017 -58005957 + RMER17A2 LTR ERVK 1 146 -760 6 932 387 41 0 0 chr15 45489017 45489066 -58005908 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 932 2833 186 86 35 chr15 45489066 45489892 -58005082 + RMER17A2 LTR ERVK 144 895 -11 6 932 748 262 5 11 chr15 45489909 45490094 -58004880 - Lx5 LINE L1 -326 6724 6541 6 932 1917 244 64 49 chr15 45492098 45492646 -58002328 + RMER2 LTR ERV1 1 556 -11 6 932 271 274 0 0 chr15 45493825 45493898 -58001076 - MERVK26-int LTR ERVK -2321 4598 4526 6 932 727 80 136 0 chr15 45495314 45495439 -57999535 - RLTR47_MM LTR ERV1 -386 146 5 6 932 339 217 0 0 chr15 45495445 45495514 -57999460 - Lx5 LINE L1 -1228 5822 5754 6 932 1059 226 172 33 chr15 45495515 45495974 -57999000 - L1_Mur3 LINE L1 -3478 2402 1880 6 932 1602 267 15 7 chr15 45495976 45496380 -57998594 + MTB_Mm LTR MaLR 1 407 0 6 932 591 271 71 24 chr15 45496399 45496652 -57998322 - L1_Mur3 LINE L1 -4031 1849 1585 6 932 329 263 109 8 chr15 45496659 45496778 -57998196 - RLTR25B LTR ERVK 0 1028 898 6 932 382 232 21 193 chr15 45496755 45496947 -57998027 - RLTR25B LTR ERVK -249 779 621 6 932 2361 118 140 2 chr15 45497027 45497477 -57997497 + RLTR47_MM LTR ERV1 21 532 0 6 932 1225 75 0 0 chr15 45497813 45497974 -57997000 - ORR1A1 LTR MaLR 0 346 186 6 932 1095 78 101 6 chr15 45497966 45498134 -57996840 + MTB LTR MaLR 217 400 0 6 932 3238 42 3 0 chr15 45498612 45498996 -57995978 - IAPEY_LTR LTR ERVK 0 385 1 6 932 1352 321 22 49 chr15 45499248 45499982 -57994992 + MuRRS4-int LTR ERV1 1050 1763 -3300 6 932 292 227 29 52 chr15 45500020 45500136 -57994838 + MuLV-int LTR ERV1 1987 2196 -5582 1 932 456 337 52 35 chr15 45500224 45500568 -57994406 + MuLV-int LTR ERV1 2094 2466 -5140 1 932 516 335 63 28 chr15 45500575 45501005 -57993969 + MuLV-int LTR ERV1 3991 4435 -3171 1 932 1486 286 18 27 chr15 45501331 45501869 -57993105 + MuRRS4-int LTR ERV1 3591 4014 -1049 2 932 646 309 18 46 chr15 45502318 45502723 -57992251 + MuRRS4-int LTR ERV1 4544 4909 -154 2 932 1896 122 276 0 chr15 45502842 45503259 -57991715 + RLTR47_MM LTR ERV1 1 532 0 3 932 1249 178 14 9 chr15 45503719 45503940 -57991034 + RLTR23 LTR ERV1 11 232 -198 4 932 807 277 71 26 chr15 45504332 45504640 -57990334 + RLTR41 LTR ERV1 125 446 0 5 932 360 0 0 0 chr15 45504977 45505017 -57989957 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 6 932 943 126 0 0 chr15 45505017 45505152 -57989822 - B1_Mus1 SINE Alu -13 135 1 7 932 497 321 48 47 chr15 45505186 45505518 -57989456 + MuRRS4-int LTR ERV1 1159 1715 -6063 8 932 747 328 44 58 chr15 45505908 45506556 -57988418 + MuRRS4-int LTR ERV1 1949 2493 -2570 8 932 404 292 60 12 chr15 45507759 45507948 -57987026 + MuRRS4-int LTR ERV1 7334 7499 -279 8 932 2388 149 28 39 chr15 45508107 45508541 -57986433 + RLTR23 LTR ERV1 2 430 0 9 932 752 232 72 57 chr15 45508620 45508885 -57986089 - RLTR25B LTR ERVK -583 445 177 1 932 6296 134 20 26 chr15 45508885 45509972 -57985002 - Lx3_Mus LINE L1 -5 7004 5924 1 932 3558 137 28 2 chr15 45509976 45510730 -57984244 - Lx3_Mus LINE L1 -858 6142 5327 1 932 650 278 64 0 chr15 45510763 45510997 -57983977 - L1_Mur3 LINE L1 -6537 1175 927 1 932 1147 255 25 39 chr15 45511000 45511350 -57983624 - RLTR11A LTR ERVK -4 524 188 1 932 807 239 69 36 chr15 45511364 45511611 -57983363 - RLTR11A LTR ERVK -270 258 4 1 932 455 220 64 0 chr15 45511616 45511725 -57983249 - L1_Mur3 LINE L1 -6779 933 818 1 932 1501 185 19 67 chr15 45511776 45512089 -57982885 - ORR1A3 LTR MaLR 0 326 29 1 932 465 362 59 4 chr15 45512103 45512358 -57982616 - L1_Mur3 LINE L1 -6946 766 498 1 932 5323 143 63 13 chr15 45513939 45514862 -57980112 - Lx3A LINE L1 -7 6974 6006 1 932 6661 219 23 129 chr15 45514863 45516026 -57978948 + Lx LINE L1 3548 4586 -1300 1 932 349 254 0 0 chr15 45516026 45516093 -57978881 + B3 SINE B2 65 131 -85 1 932 6661 219 23 129 chr15 45516093 45516139 -57978835 + Lx LINE L1 4587 4628 -1258 1 932 315 0 0 0 chr15 45516139 45516174 -57978800 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 932 6661 182 17 65 chr15 45516174 45518280 -57976694 + Lx LINE L1 4629 6654 0 1 932 2995 172 21 0 chr15 45518283 45518370 -57976604 - L1_Mur1 LINE L1 -599 5287 5201 2 932 227 31 31 0 chr15 45518370 45518402 -57976572 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2 932 2995 172 21 0 chr15 45518402 45518872 -57976102 - L1_Mur1 LINE L1 -686 5200 4719 2 932 270 243 0 0 chr15 45518894 45518968 -57976006 + T-rich Low_complexity Low_complexity 1 74 0 2 932 185 360 142 18 chr15 45519419 45519532 -57975442 + L2 LINE L2 2766 2892 -527 2 932 253 346 0 9 chr15 45519563 45519668 -57975306 + MER5B DNA MER1_type 29 132 -46 2 932 2554 98 11 8 chr15 45520939 45521310 -57973664 - RLTR9A2 LTR ERVK -9 374 3 2 932 472 222 116 67 chr15 45521595 45521870 -57973104 - ETnERV2-int LTR ERVK -983 6423 6223 2 932 492 218 45 18 chr15 45521839 45521951 -57973023 - ETnERV2-int LTR ERVK -1195 6211 6097 2 932 4969 142 60 26 chr15 45521959 45522876 -57972098 - ETnERV2-int LTR ERVK -1230 4176 3229 2 932 321 47 0 0 chr15 45522876 45522919 -57972055 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 932 414 0 0 0 chr15 45522919 45522964 -57972010 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 932 274 151 38 0 chr15 45522964 45523017 -57971957 - ETnERV2-int LTR ERVK -2546 2860 2806 2 932 4083 65 44 20 chr15 45523017 45523568 -57971406 + LTRIS2 LTR ERV1 1 564 0 3 932 281 176 104 52 chr15 45523568 45523664 -57971310 + RLTR1B-int LTR ERV1 1 101 -3597 3 932 720 75 0 0 chr15 45523770 45523863 -57971111 + RLTR1B-int LTR ERV1 201 293 -3006 3 932 995 145 63 16 chr15 45524210 45524399 -57970575 + RMER16-int LTR ERVK 141 338 -5068 3 932 4478 152 17 15 chr15 45524404 45525157 -57969817 + RMER16-int LTR ERVK 690 1444 -3962 3 932 316 148 0 32 chr15 45525148 45525211 -57969763 + RLTR1B-int LTR ERV1 760 820 -4243 3 932 2880 256 41 33 chr15 45525260 45525896 -57969078 + RLTR1B-int LTR ERV1 1014 1662 -3401 3 932 207 0 0 0 chr15 45525896 45525919 -57969055 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 932 189 0 0 0 chr15 45525919 45525939 -57969035 + (GA)n Simple_repeat Simple_repeat 1 21 0 3 932 2880 81 38 42 chr15 45525939 45526592 -57968382 + RLTR1B-int LTR ERV1 1172 1911 -1388 3 932 37816 46 3 3 chr15 45526592 45533096 -57961878 - L1Md_T LINE L1 0 6585 1 3 932 1934 142 55 18 chr15 45533096 45533478 -57961496 + RLTR1B-int LTR ERV1 2453 2749 -949 3 932 7438 166 45 81 chr15 45533475 45533891 -57961083 - ETnERV2-int LTR ERVK -4664 2742 2392 2 932 1562 43 0 0 chr15 45533891 45534076 -57960898 - B2_Mm1t SINE B2 -5 188 4 3 932 7438 166 45 81 chr15 45534076 45535398 -57959576 - ETnERV2-int LTR ERVK -5015 2391 1066 2 932 24 0 0 0 chr15 45535441 45535465 -57959509 + AT_rich Low_complexity Low_complexity 1 24 0 3 932 2328 119 35 63 chr15 45535799 45536193 -57958781 - RLTR9A2 LTR ERVK 0 383 1 3 932 275 339 134 30 chr15 45537006 45537274 -57957700 - ERVL-E-int LTR ERVL -1214 4500 4205 4 932 510 360 56 31 chr15 45537311 45537755 -57957219 - ERVL-E-int LTR ERVL -1634 4033 3579 4 932 26 50 0 0 chr15 45538115 45538155 -57956819 + AT_rich Low_complexity Low_complexity 1 40 0 4 932 2509 132 55 34 chr15 45538363 45538835 -57956139 - RLTR45 LTR ERVK 0 482 1 4 932 413 285 72 44 chr15 45539190 45539370 -57955604 - Lx5 LINE L1 0 7050 6866 4 932 810 241 0 0 chr15 45539375 45539541 -57955433 - Lx4B LINE L1 -424 6634 6469 4 932 1106 63 0 0 chr15 45540176 45540318 -57954656 + B1_Mus2 SINE Alu 6 147 0 4 932 441 129 0 0 chr15 45541933 45542026 -57952948 + (TC)n Simple_repeat Simple_repeat 2 94 0 4 932 582 54 0 0 chr15 45543694 45543768 -57951206 + (CA)n Simple_repeat Simple_repeat 1 74 0 4 932 360 43 0 0 chr15 45543768 45543813 -57951161 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 932 279 292 10 0 chr15 45543858 45543954 -57951020 + (CAGTT)n Simple_repeat Simple_repeat 4 100 0 4 932 1042 136 38 5 chr15 45544014 45544199 -57950775 + RMER6C LTR ERVK 500 690 0 5 932 9242 120 13 39 chr15 45545283 45547678 -57947296 - L1VL2 LINE L1 -1102 2513 180 5 932 899 214 36 0 chr15 45549643 45549839 -57945135 + ORR1A3 LTR MaLR 124 326 0 5 932 1554 252 158 51 chr15 45550137 45550689 -57944285 - RMER20B LTR ERVK -16 611 1 5 932 440 111 33 11 chr15 45551006 45551097 -57943877 + CT-rich Low_complexity Low_complexity 1 93 0 5 932 25 0 0 0 chr15 45551925 45551950 -57943024 + AT_rich Low_complexity Low_complexity 1 25 0 5 932 30 69 0 0 chr15 45552251 45552309 -57942665 + AT_rich Low_complexity Low_complexity 1 58 0 5 932 212 148 43 64 chr15 45552433 45552527 -57942447 + (TTTAA)n Simple_repeat Simple_repeat 5 96 0 5 932 585 323 86 20 chr15 45552712 45553015 -57941959 - Lx8 LINE L1 -575 6898 6576 5 932 575 27 14 0 chr15 45553194 45553267 -57941707 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 5 932 492 158 0 0 chr15 45553272 45553367 -57941607 + (TG)n Simple_repeat Simple_repeat 2 96 0 6 932 335 353 21 42 chr15 45554400 45554542 -57940432 - MLT1A1 LTR MaLR -28 380 242 6 932 882 205 141 23 chr15 45554645 45554950 -57940024 - Lx7 LINE L1 0 7696 7356 6 932 26 74 0 0 chr15 45554960 45555014 -57939960 + AT_rich Low_complexity Low_complexity 1 54 0 6 932 23 0 0 0 chr15 45555458 45555481 -57939493 + AT_rich Low_complexity Low_complexity 1 23 0 6 932 420 296 101 42 chr15 45556121 45556428 -57938546 + RLTR15 LTR ERVK 19 343 -16 6 932 44 0 0 0 chr15 45557903 45557947 -57937027 + AT_rich Low_complexity Low_complexity 1 44 0 6 932 1281 170 13 9 chr15 45558363 45558595 -57936379 + Lx2B LINE L1 6245 6477 -523 6 932 225 65 0 0 chr15 45558832 45558863 -57936111 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 932 1116 88 0 0 chr15 45558911 45559058 -57935916 - B1_Mm SINE Alu 0 147 1 6 932 1190 201 9 30 chr15 45559085 45559301 -57935673 - URR1A DNA MER1_type 0 226 15 7 932 4176 197 61 60 chr15 45559301 45559394 -57935580 - RMER13B LTR ERVK 0 908 818 7 932 246 32 0 0 chr15 45559394 45559425 -57935549 + (TTG)n Simple_repeat Simple_repeat 2 32 0 7 932 4176 197 61 60 chr15 45559425 45560238 -57934736 - RMER13B LTR ERVK -91 817 1 7 932 1190 201 9 30 chr15 45560238 45560252 -57934722 - URR1A DNA MER1_type -212 14 1 7 932 295 239 20 101 chr15 45561045 45561194 -57933780 - L1MB8 LINE L1 -29 6149 6013 7 932 369 0 0 0 chr15 45563333 45563374 -57931600 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 932 530 67 13 0 chr15 45563381 45563456 -57931518 + (GA)n Simple_repeat Simple_repeat 1 76 0 7 932 7058 89 28 3 chr15 45563723 45564940 -57930034 + L1_Mus2 LINE L1 5328 6566 0 7 932 310 230 95 0 chr15 45565102 45565176 -57929798 + Lx8 LINE L1 6844 6924 -549 7 932 290 297 44 26 chr15 45565191 45565305 -57929669 - Lx8 LINE L1 -1186 6287 6172 7 932 24 32 0 0 chr15 45565812 45565843 -57929131 + AT_rich Low_complexity Low_complexity 1 31 0 7 932 315 0 0 0 chr15 45566294 45566329 -57928645 + (TA)n Simple_repeat Simple_repeat 2 36 0 8 932 925 173 36 36 chr15 45566360 45566552 -57928422 - ORR1C2 LTR MaLR 0 384 193 8 932 346 145 0 16 chr15 45566552 45566615 -57928359 - MT2C_Mm LTR ERVL 0 475 414 8 932 1249 129 0 5 chr15 45566617 45566804 -57928170 + MERVL_2A-int LTR ERVL 5300 5485 -276 8 932 315 257 67 29 chr15 45566864 45566968 -57928006 + ORR1A3-int LTR MaLR 533 640 -1323 8 932 2270 124 172 38 chr15 45567003 45567422 -57927552 + MT2C_Mm LTR ERVL 1 475 0 8 932 457 159 0 120 chr15 45567451 45567551 -57927423 - ORR1C2 LTR MaLR -263 121 34 8 932 285 310 19 29 chr15 45568129 45568232 -57926742 - MLT1F2 LTR MaLR -103 457 356 8 932 26 88 0 0 chr15 45569364 45569432 -57925542 + AT_rich Low_complexity Low_complexity 1 68 0 8 932 8188 72 7 0 chr15 45569494 45570576 -57924398 + L1Md_F2 LINE L1 4496 5584 -299 8 932 8168 45 1 0 chr15 45570579 45571571 -57923403 + L1Md_F2 LINE L1 5588 6580 -2 8 932 2143 174 125 1 chr15 45571903 45572555 -57922419 - Lx2B LINE L1 -924 6076 5359 8 932 7348 82 8 8 chr15 45572658 45574351 -57920623 - L1Md_F2 LINE L1 -2 6583 4893 9 932 12842 87 9 1 chr15 45574348 45576387 -57918587 - L1Md_F2 LINE L1 -2794 3092 939 9 932 2113 188 14 29 chr15 45576387 45576831 -57918143 - L1VL1 LINE L1 -6005 417 1 9 932 22 35 0 0 chr15 45576839 45576868 -57918106 + AT_rich Low_complexity Low_complexity 1 29 0 9 932 24 0 0 0 chr15 45577614 45577638 -57917336 + AT_rich Low_complexity Low_complexity 1 24 0 9 932 25 0 0 0 chr15 45580001 45580026 -57914948 + AT_rich Low_complexity Low_complexity 1 25 0 9 932 360 348 115 78 chr15 45580070 45580313 -57914661 + B4 SINE B4 27 278 -14 9 932 552 100 0 0 chr15 45580319 45580399 -57914575 + (TC)n Simple_repeat Simple_repeat 1 80 0 9 932 415 331 7 7 chr15 45580527 45580670 -57914304 + Lx8 LINE L1 6403 6545 -928 9 932 3388 169 50 23 chr15 45580851 45581583 -57913391 - RMER6A LTR ERVK 0 756 5 9 932 526 141 11 0 chr15 45581686 45581778 -57913196 - Lx2 LINE L1 -948 6049 5957 9 932 757 148 14 0 chr15 45581778 45581920 -57913054 + CT-rich Low_complexity Low_complexity 3 146 0 1 932 2794 214 38 5 chr15 45581921 45582476 -57912498 - Lx3C LINE L1 -31 6945 6373 1 932 837 189 6 19 chr15 45582476 45582638 -57912336 + Lx2 LINE L1 6188 6347 -653 1 932 1138 75 0 0 chr15 45582644 45582790 -57912184 - B1_Mm SINE Alu 0 147 2 1 932 471 35 0 0 chr15 45582800 45582857 -57912117 + (TTA)n Simple_repeat Simple_repeat 2 58 0 1 932 21 0 0 0 chr15 45582857 45582878 -57912096 + AT_rich Low_complexity Low_complexity 1 21 0 1 932 4091 70 31 4 chr15 45582878 45583426 -57911548 - L1Md_F2 LINE L1 -14 6568 6006 1 932 3274 199 10 22 chr15 45583418 45584090 -57910884 + Lx2 LINE L1 6332 6995 -2 1 932 10540 132 12 9 chr15 45584133 45586709 -57908265 - L1_Mus3 LINE L1 -9 6629 4047 1 932 8575 128 4 23 chr15 45586708 45588165 -57906809 - MusHAL1 LINE L1 -1061 1651 222 1 932 350 21 0 21 chr15 45588165 45588213 -57906761 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 1 932 35120 68 3 1 chr15 45588215 45593878 -57901096 - L1Md_F2 LINE L1 -24 6561 794 1 932 255 163 0 0 chr15 45593878 45593921 -57901053 - L1Md_F2 LINE L1 -5987 632 590 1 932 483 283 0 0 chr15 45593919 45594039 -57900935 - L1Md_F LINE L1 -6191 328 209 1 932 428 242 0 0 chr15 45594035 45594130 -57900844 - L1Md_F2 LINE L1 -5986 633 539 1 932 295 263 21 10 chr15 45594129 45594225 -57900749 - L1VL1 LINE L1 -6323 99 3 1 932 2464 142 0 31 chr15 45594230 45594409 -57900565 - L1VL4 LINE L1 -2492 1067 896 1 932 216 0 0 0 chr15 45594409 45594433 -57900541 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 932 2464 240 38 110 chr15 45594433 45595262 -57899712 - L1VL4 LINE L1 -5407 895 127 1 932 360 43 0 0 chr15 45595891 45595937 -57899037 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 932 1999 127 7 0 chr15 45596390 45596698 -57898276 - Lx LINE L1 -525 6129 5820 1 932 2613 162 38 79 chr15 45596686 45597291 -57897683 - L1_Mm LINE L1 -905 4978 4399 1 932 3792 99 25 1 chr15 45597288 45598072 -57896902 - L1VL4 LINE L1 -2083 1476 674 1 932 2387 239 31 105 chr15 45598553 45599481 -57895493 - L1VL2 LINE L1 -5594 741 1 1 932 252 149 22 33 chr15 45599584 45599674 -57895300 + (CAGAGA)n Simple_repeat Simple_repeat 2 90 0 1 932 336 254 11 6 chr15 45599857 45600035 -57894939 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 932 254 291 23 11 chr15 45600192 45600279 -57894695 + Charlie1b DNA MER1_type 421 508 -15 1 932 321 267 34 34 chr15 45601054 45601143 -57893831 + ORR1E LTR MaLR 28 116 -243 1 932 767 336 39 34 chr15 45601156 45601605 -57893369 + Lx9 LINE L1 7002 7456 -188 1 932 189 107 0 0 chr15 45601605 45601633 -57893341 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 932 767 336 39 34 chr15 45601633 45601651 -57893323 + Lx9 LINE L1 7457 7471 -173 1 932 29 0 0 0 chr15 45601651 45601680 -57893294 + AT_rich Low_complexity Low_complexity 1 29 0 1 932 311 320 53 34 chr15 45602054 45602276 -57892698 - MLT2C1 LTR ERVL -176 238 12 1 932 231 306 51 23 chr15 45602338 45602515 -57892459 - HAL1 LINE L1 -876 1631 1450 1 932 23 0 0 0 chr15 45602594 45602617 -57892357 + AT_rich Low_complexity Low_complexity 1 23 0 1 932 33 0 0 0 chr15 45602838 45602871 -57892103 + AT_rich Low_complexity Low_complexity 1 33 0 1 932 294 180 0 0 chr15 45602969 45603030 -57891944 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 932 341 376 58 9 chr15 45603226 45603460 -57891514 - L1MD1 LINE L1 -283 6076 5822 1 932 356 305 45 74 chr15 45603477 45603603 -57891371 - MLT1B LTR MaLR -7 383 270 1 932 2869 95 2 12 chr15 45603603 45604007 -57890967 + MTB LTR MaLR 1 400 0 1 932 356 305 45 74 chr15 45604007 45604082 -57890892 - MLT1B LTR MaLR -121 269 188 1 932 352 367 30 15 chr15 45604121 45604323 -57890651 + B3 SINE B2 2 206 -10 1 932 288 0 0 0 chr15 45604384 45604416 -57890558 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 932 373 263 68 26 chr15 45604656 45604847 -57890127 - L1MA4A LINE L1 -426 5877 5649 1 932 37815 16 2 8 chr15 45605077 45610286 -57884688 + L1Md_A LINE L1 413 5585 -298 1 932 8625 22 0 0 chr15 45610287 45611282 -57883692 + L1Md_A LINE L1 5587 6581 -1 1 932 953 274 143 3 chr15 45611634 45611927 -57883047 - ORR1D1 LTR MaLR -1 373 40 1 932 392 268 0 3 chr15 45611933 45612051 -57882923 - ORR1D1-int LTR MaLR 0 1370 1275 1 932 288 358 38 38 chr15 45612181 45612338 -57882636 + RLTR14 LTR ERV1 226 382 0 1 932 390 323 30 24 chr15 45612338 45612495 -57882479 + ORR1D-int LTR MaLR 52 209 -1161 1 932 223 146 0 40 chr15 45612712 45612762 -57882212 + T-rich Low_complexity Low_complexity 2 49 0 1 116 1275 358 39 53 chr15 45612787 45613628 -57881346 - Lx5 LINE L1 -41 7009 6181 1 933 1885 178 24 3 chr15 45613700 45614039 -57880935 - ORR1A1 LTR MaLR 0 346 1 1 933 8600 175 81 19 chr15 45614039 45615887 -57879087 - ORR1A1-int LTR MaLR 0 1963 1 1 933 311 164 0 0 chr15 45615887 45615942 -57879032 - ORR1A1 LTR MaLR 0 326 272 1 933 914 141 5 56 chr15 45615968 45616163 -57878811 - Lx LINE L1 -2 6652 6468 1 933 1246 152 77 153 chr15 45616172 45616248 -57878726 - ORR1A1 LTR MaLR -45 301 257 1 933 3886 90 0 0 chr15 45616248 45616771 -57878203 + L1_Mus1 LINE L1 6044 6566 -1 1 933 1432 152 77 153 chr15 45616771 45617020 -57877954 - ORR1A1 LTR MaLR -90 256 1 1 933 316 270 106 39 chr15 45617023 45617127 -57877847 + MTE2a LTR MaLR 57 167 -212 1 933 454 267 68 8 chr15 45617152 45617284 -57877690 + MTE2a LTR MaLR 240 379 0 1 933 235 204 0 0 chr15 45618368 45618417 -57876557 + L1M2 LINE L1 5578 5626 -674 1 933 1797 196 86 21 chr15 45618551 45618795 -57876179 - RMER6B LTR ERVK 0 461 218 1 933 202 29 57 0 chr15 45618795 45618830 -57876144 + (TTG)n Simple_repeat Simple_repeat 2 38 0 1 933 1797 196 86 21 chr15 45618830 45619018 -57875956 - RMER6B LTR ERVK -244 217 3 1 933 559 183 48 0 chr15 45619019 45619123 -57875851 - RMER6B LTR ERVK -350 111 3 1 933 322 350 80 16 chr15 45619189 45619439 -57875535 - L1MD3 LINE L1 -1540 6455 6190 1 933 212 158 0 26 chr15 45619445 45619484 -57875490 + CT-rich Low_complexity Low_complexity 3 40 0 1 933 525 325 121 11 chr15 45620189 45620379 -57874595 - B4 SINE B4 -13 279 69 1 933 198 0 0 0 chr15 45620385 45620407 -57874567 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 1 933 234 0 0 0 chr15 45620575 45620601 -57874373 + (A)n Simple_repeat Simple_repeat 1 26 0 1 933 1775 259 30 0 chr15 45620624 45621060 -57873914 - Lx4B LINE L1 -588 6470 6022 1 933 1348 284 17 36 chr15 45621059 45621530 -57873444 + Lx2B LINE L1 6461 6922 -78 1 933 279 0 0 0 chr15 45621530 45621561 -57873413 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 1 933 1106 342 60 6 chr15 45622498 45622983 -57871991 - LTR75 LTR ERVL 0 562 52 1 933 201 283 0 0 chr15 45623104 45623164 -57871810 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 933 225 0 0 0 chr15 45624595 45624620 -57870354 + (A)n Simple_repeat Simple_repeat 1 25 0 1 933 4372 137 64 8 chr15 45624645 45625411 -57869563 + RMER17D2 LTR ERVK 1 809 0 1 933 34 55 0 0 chr15 45625421 45625476 -57869498 + AT_rich Low_complexity Low_complexity 1 55 0 1 933 393 294 0 78 chr15 45625478 45625607 -57869367 + B2_Mm2 SINE B2 3 121 -74 1 933 233 327 19 9 chr15 45626375 45626483 -57868491 - LTR40a LTR ERVL -2 460 352 1 933 319 378 26 0 chr15 45626725 45626876 -57868098 - LTR40a LTR ERVL -362 157 3 1 933 215 348 10 52 chr15 45626933 45627030 -57867944 + PB1D10 SINE Alu 19 111 -6 1 933 12383 172 33 7 chr15 45627211 45629699 -57865275 + Lx2A LINE L1 2056 4609 -1268 1 933 3991 165 88 63 chr15 45629703 45630426 -57864548 + L1Md_F2 LINE L1 217 1013 -5625 1 933 1597 36 0 25 chr15 45630426 45630623 -57864351 + B2_Mm1a SINE B2 2 193 0 1 933 3991 141 78 52 chr15 45630623 45630939 -57864035 + L1Md_F2 LINE L1 987 1278 -5360 1 933 29217 93 5 5 chr15 45630935 45631639 -57863335 + L1Md_F2 LINE L1 1396 2086 -3797 1 933 252 0 0 0 chr15 45631639 45631667 -57863307 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1 933 29217 93 5 5 chr15 45631667 45635154 -57859820 + L1Md_F2 LINE L1 2087 5586 -297 1 933 7538 70 1 7 chr15 45635155 45636144 -57858830 + L1Md_F2 LINE L1 5588 6570 -12 1 933 8111 168 28 11 chr15 45636144 45638476 -57856498 + Lx2A LINE L1 4605 6968 -40 1 933 373 132 0 78 chr15 45638476 45638566 -57856408 + Lx2A LINE L1 6924 7006 -2 1 933 1087 226 87 103 chr15 45638998 45639025 -57855949 + ORR1D1 LTR MaLR 1 27 -347 1 933 3728 35 5 0 chr15 45639025 45639459 -57855515 + RLTR10C LTR ERVK 1 436 0 1 933 1087 226 87 103 chr15 45639459 45639810 -57855164 + ORR1D1 LTR MaLR 28 373 -1 1 933 8130 136 35 1 chr15 45640003 45641310 -57853664 + Lx3B LINE L1 5619 6969 -4 1 933 28 48 0 0 chr15 45641522 45641564 -57853410 + AT_rich Low_complexity Low_complexity 1 42 0 1 933 830 358 45 15 chr15 45642316 45642648 -57852326 - MTE2b LTR MaLR -20 359 18 1 933 4347 93 3 13 chr15 45642654 45642676 -57852298 - L1_Mus2 LINE L1 -365 6201 6182 1 933 2853 68 5 8 chr15 45642676 45643061 -57851913 + L1Md_F2 LINE L1 6199 6582 0 1 933 16461 202 15 95 chr15 45643061 45649488 -57845486 - L1_Mus2 LINE L1 -385 6181 339 1 933 315 0 0 0 chr15 45649488 45649523 -57845451 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1 933 1400 277 82 102 chr15 45649523 45649640 -57845334 - L1_Mus2 LINE L1 -6300 338 245 1 933 552 15 0 0 chr15 45650445 45650510 -57844464 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 933 3724 119 7 14 chr15 45651038 45651609 -57843365 - RMER2 LTR ERV1 0 567 1 1 933 251 194 0 31 chr15 45651622 45651686 -57843288 + T-rich Low_complexity Low_complexity 4 65 0 1 933 7688 72 6 5 chr15 45653131 45654796 -57840178 - L1Md_F2 LINE L1 -19 6563 4898 1 933 6499 86 8 0 chr15 45654788 45655687 -57839287 + L1Md_F2 LINE L1 3987 4892 -991 1 933 321 93 0 0 chr15 45655806 45655860 -57839114 + (TTTTG)n Simple_repeat Simple_repeat 1 54 0 1 933 596 279 7 35 chr15 45655861 45656006 -57838968 - B1_Mur4 SINE Alu 0 150 10 1 933 528 45 0 0 chr15 45656141 45656208 -57838766 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 933 275 326 147 0 chr15 45656208 45656303 -57838671 - B3 SINE B2 -30 186 78 1 933 335 324 37 0 chr15 45657765 45657873 -57837101 + B4A SINE B4 173 284 -8 1 933 207 203 39 51 chr15 45657883 45657961 -57837013 + (CAGAGA)n Simple_repeat Simple_repeat 2 78 0 1 933 221 75 25 0 chr15 45658084 45658124 -57836850 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 933 1866 163 10 3 chr15 45658223 45658459 -57836515 - Lx2 LINE L1 -31 6966 6732 1 933 180 0 0 0 chr15 45658459 45658479 -57836495 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 933 1866 163 10 3 chr15 45658479 45658550 -57836424 - Lx2 LINE L1 -266 6731 6658 1 933 608 115 0 0 chr15 45658550 45658637 -57836337 + B2_Mm2 SINE B2 1 87 -108 1 933 225 315 46 9 chr15 45658980 45659089 -57835885 - Tigger15a DNA TcMar -128 587 475 1 933 285 29 0 0 chr15 45659403 45659437 -57835537 + (GA)n Simple_repeat Simple_repeat 1 34 0 1 933 24 53 0 0 chr15 45659701 45659739 -57835235 + AT_rich Low_complexity Low_complexity 1 38 0 1 933 1240 202 167 41 chr15 45659767 45660108 -57834866 + ORR1C2 LTR MaLR 1 384 0 1 933 259 243 27 0 chr15 45660333 45660407 -57834567 + GA-rich Low_complexity Low_complexity 1 76 0 1 933 232 312 12 12 chr15 45660813 45660894 -57834080 + (CATA)n Simple_repeat Simple_repeat 4 84 0 2 933 1327 264 57 27 chr15 45661056 45661461 -57833513 - MTD LTR MaLR 0 419 3 2 933 294 288 65 89 chr15 45661616 45661784 -57833190 + MIR SINE MIR 97 260 -2 2 933 890 159 0 12 chr15 45661964 45662136 -57832838 - Lx2 LINE L1 0 6997 6828 2 933 266 67 22 0 chr15 45662166 45662211 -57832763 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 2 933 2427 114 42 40 chr15 45663844 45664247 -57830727 + L1_Mus3 LINE L1 6216 6619 -19 2 933 25 83 0 0 chr15 45664536 45664596 -57830378 + AT_rich Low_complexity Low_complexity 1 60 0 2 933 185 159 23 0 chr15 45664605 45664649 -57830325 + T-rich Low_complexity Low_complexity 4 48 0 2 933 276 83 16 48 chr15 45664969 45665032 -57829942 + (CAAAAA)n Simple_repeat Simple_repeat 2 62 0 2 933 269 220 0 0 chr15 45665224 45665283 -57829691 + A-rich Low_complexity Low_complexity 1 59 0 2 933 210 71 0 0 chr15 45665284 45665312 -57829662 + (CAA)n Simple_repeat Simple_repeat 3 30 0 2 933 3919 152 16 32 chr15 45665321 45666050 -57828924 + Lx3B LINE L1 5586 6276 -697 2 933 2237 165 25 41 chr15 45666043 45666478 -57828496 + Lx3B LINE L1 6509 6936 -37 2 933 26 0 0 0 chr15 45666495 45666521 -57828453 + AT_rich Low_complexity Low_complexity 1 26 0 2 933 1569 235 43 24 chr15 45666627 45666998 -57827976 + ORR1C1 LTR MaLR 1 378 0 2 933 1619 51 0 0 chr15 45667419 45667615 -57827359 - L1_Mm LINE L1 -169 5714 5519 2 933 2849 37 0 14 chr15 45667616 45667976 -57826998 + L1Md_F3 LINE L1 6229 6583 -1 2 933 426 350 34 75 chr15 45668061 45668354 -57826620 - B4A SINE B4 -6 286 6 2 933 412 86 29 0 chr15 45668609 45668679 -57826295 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 933 239 376 25 17 chr15 45668851 45668970 -57826004 + MLT1E LTR MaLR 495 614 -39 2 933 2457 70 24 0 chr15 45669094 45669425 -57825549 - L1_Mus3 LINE L1 -7 6631 6293 2 933 29 70 0 0 chr15 45669964 45670021 -57824953 + AT_rich Low_complexity Low_complexity 1 57 0 2 933 21 36 0 0 chr15 45670040 45670068 -57824906 + AT_rich Low_complexity Low_complexity 1 28 0 2 933 531 390 54 28 chr15 45670321 45670709 -57824265 - Lx8 LINE L1 -180 7293 6896 2 933 228 67 0 0 chr15 45671677 45671707 -57823267 + (A)n Simple_repeat Simple_repeat 1 30 0 2 933 249 342 181 0 chr15 45671724 45671873 -57823101 - MER20 DNA MER1_type -4 215 40 2 933 678 291 23 50 chr15 45671905 45672126 -57822848 - B3 SINE B2 0 216 2 2 933 309 51 0 0 chr15 45672220 45672259 -57822715 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 933 432 0 0 0 chr15 45672589 45672637 -57822337 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 933 792 108 0 0 chr15 45672638 45672758 -57822216 - B1_Mus2 SINE Alu -26 121 2 2 933 29 47 0 0 chr15 45673010 45673053 -57821921 + AT_rich Low_complexity Low_complexity 1 43 0 2 933 21 36 0 0 chr15 45673099 45673127 -57821847 + AT_rich Low_complexity Low_complexity 1 28 0 2 933 205 370 101 34 chr15 45673412 45673591 -57821383 + L2b LINE L2 2955 3145 -230 2 933 25 65 0 0 chr15 45673762 45673808 -57821166 + AT_rich Low_complexity Low_complexity 1 46 0 2 933 3057 59 8 0 chr15 45673975 45674364 -57820610 + L1Md_F2 LINE L1 6180 6571 -11 2 933 22 0 0 0 chr15 45675061 45675083 -57819891 + AT_rich Low_complexity Low_complexity 1 22 0 2 933 2508 291 26 11 chr15 45675112 45675765 -57819209 + Lx5 LINE L1 6341 7003 -47 2 933 189 0 0 0 chr15 45675786 45675807 -57819167 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2 933 2850 96 12 5 chr15 45675830 45676251 -57818723 - L1_Mus3 LINE L1 -2 6636 6213 2 933 2895 233 23 6 chr15 45676251 45676908 -57818066 - Lx5 LINE L1 -720 6330 5663 2 933 604 171 0 9 chr15 45677408 45677520 -57817454 - MTB-int LTR MaLR -987 111 1 2 933 2406 145 18 5 chr15 45677520 45677915 -57817059 - MTB LTR MaLR 0 400 1 2 933 217 167 0 20 chr15 45679610 45679659 -57815315 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 2 933 1245 185 58 22 chr15 45679679 45679955 -57815019 - Lx LINE L1 -2 6652 6367 2 933 1261 146 41 5 chr15 45679959 45680180 -57814794 - RMER17A LTR ERVK 0 751 523 2 933 999 112 12 6 chr15 45680199 45680370 -57814604 + (TTTCC)n Simple_repeat Simple_repeat 2 173 0 2 933 548 94 0 0 chr15 45680374 45680462 -57814512 - RMER3D-int LTR ERVK -2278 564 489 2 933 8281 176 50 35 chr15 45680503 45682264 -57812710 - L1_Mm LINE L1 -54 5829 4041 2 933 37275 43 8 2 chr15 45682270 45688428 -57806546 - L1Md_T LINE L1 0 6585 298 2 933 7464 188 87 4 chr15 45688424 45690073 -57804901 - L1_Mur2 LINE L1 -1833 4044 2259 2 933 5968 122 9 11 chr15 45690081 45691008 -57803966 - L1_Mus3 LINE L1 -2 6636 5712 2 933 7020 110 4 6 chr15 45691005 45692056 -57802918 + L1_Mm LINE L1 3814 4862 -1021 2 933 5528 135 21 4 chr15 45692049 45693781 -57801193 - L1VL4 LINE L1 -1773 1786 21 2 933 1071 228 34 95 chr15 45694076 45694203 -57800771 - RMER17C LTR ERVK -8 402 268 2 933 522 0 0 0 chr15 45694203 45694261 -57800713 + (TA)n Simple_repeat Simple_repeat 1 58 0 2 933 1071 228 34 95 chr15 45694261 45694476 -57800498 - RMER17C LTR ERVK -143 267 85 2 933 416 19 19 0 chr15 45694476 45694529 -57800445 + (GA)n Simple_repeat Simple_repeat 2 55 0 2 933 1071 208 134 26 chr15 45694529 45694645 -57800329 - RMER17C LTR ERVK -326 84 17 2 933 291 225 36 48 chr15 45695159 45695243 -57799731 - MER67D LTR ERV1 -293 418 336 2 933 550 242 56 102 chr15 45695263 45695479 -57799495 - MER67D LTR ERV1 -308 206 1 2 933 383 0 21 0 chr15 45695818 45695865 -57799109 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 2 933 1073 204 81 5 chr15 45696723 45696944 -57798030 + L1VL2 LINE L1 68 305 -6030 2 933 656 123 0 26 chr15 45696942 45697044 -57797930 + MusHAL1 LINE L1 1491 1590 -1122 2 933 372 43 0 0 chr15 45697044 45697090 -57797884 + (CAAAA)n Simple_repeat Simple_repeat 4 49 0 2 933 656 123 0 26 chr15 45697090 45697104 -57797870 + MusHAL1 LINE L1 1591 1603 -1109 2 933 711 132 0 0 chr15 45697104 45697218 -57797756 + (CAAAAA)n Simple_repeat Simple_repeat 5 118 0 2 933 3166 87 0 14 chr15 45697218 45697708 -57797266 + MusHAL1 LINE L1 1594 2076 -636 2 933 1687 171 3 3 chr15 45697707 45697989 -57796985 + Lx LINE L1 6060 6341 -313 2 933 739 233 202 12 chr15 45699156 45699404 -57795570 - Lx9 LINE L1 -241 7403 7109 2 933 22 35 0 0 chr15 45699460 45699489 -57795485 + AT_rich Low_complexity Low_complexity 1 29 0 2 933 585 241 26 65 chr15 45699562 45699603 -57795371 - B1_Mur2 SINE Alu 0 149 109 2 933 2414 184 63 57 chr15 45699603 45700287 -57794687 - RMER6C LTR ERVK 0 690 3 2 933 585 241 26 65 chr15 45700287 45700400 -57794574 - B1_Mur2 SINE Alu -41 108 1 2 933 211 184 0 0 chr15 45701429 45701467 -57793507 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 933 443 312 127 83 chr15 45702190 45702553 -57792421 + MTEb LTR MaLR 1 379 0 2 933 637 321 5 36 chr15 45703092 45703232 -57791742 - Lx8 LINE L1 -1047 6426 6294 2 933 694 275 122 57 chr15 45703232 45703583 -57791391 - ORR1D1 LTR MaLR 0 374 1 2 933 637 321 5 36 chr15 45703583 45703665 -57791309 - Lx8 LINE L1 -1180 6293 6211 2 933 577 288 26 51 chr15 45703687 45703921 -57791053 + Lx8 LINE L1 6431 6658 -815 2 933 851 224 56 31 chr15 45703931 45704306 -57790668 - RMER6A LTR ERVK 0 720 472 2 933 547 150 38 38 chr15 45704377 45704492 -57790482 - RMER6A LTR ERVK -597 123 10 2 933 454 245 53 88 chr15 45704511 45704681 -57790293 - ORR1C2 LTR MaLR -218 166 3 2 933 274 317 20 10 chr15 45704681 45704775 -57790199 + ORR1C2 LTR MaLR 287 381 -3 2 933 274 363 0 0 chr15 45705014 45705026 -57789948 + PB1D10 SINE Alu 1 91 -26 2 933 284 329 0 0 chr15 45705026 45705105 -57789869 + ID_B1 SINE B4 94 172 -52 2 933 24 32 0 0 chr15 45705378 45705409 -57789565 + AT_rich Low_complexity Low_complexity 1 31 0 2 933 1164 225 152 30 chr15 45705744 45706079 -57788895 + MTD LTR MaLR 38 413 -6 2 933 318 311 38 0 chr15 45706693 45706799 -57788175 + MTE2a LTR MaLR 1 110 -269 2 933 274 276 108 35 chr15 45707005 45707206 -57787768 - RMER20A LTR ERVK -194 433 223 2 933 730 322 20 41 chr15 45707403 45707649 -57787325 + MTE2a LTR MaLR 125 365 -14 2 933 543 278 45 20 chr15 45707704 45707902 -57787072 - L1_Mur3 LINE L1 -359 5521 5319 2 933 436 236 8 39 chr15 45707906 45708034 -57786940 - RMER21A LTR ERV1 -374 573 450 2 933 237 286 295 0 chr15 45708105 45708217 -57786757 + RMER21A LTR ERV1 169 313 -634 2 933 340 282 39 39 chr15 45708311 45708440 -57786534 - L1_Mur3 LINE L1 -700 5180 5052 2 933 195 100 0 0 chr15 45708651 45708681 -57786293 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2 933 315 182 0 0 chr15 45708853 45708908 -57786066 + B3A SINE B2 1 55 -143 2 933 696 296 37 65 chr15 45708898 45709115 -57785859 - MTE2a LTR MaLR -168 211 1 2 933 256 300 0 0 chr15 45709517 45709607 -57785367 + L1MA7 LINE L1 6179 6268 -23 2 933 21 71 0 0 chr15 45709928 45709970 -57785004 + AT_rich Low_complexity Low_complexity 1 42 0 2 933 286 328 25 17 chr15 45710462 45710580 -57784394 - L1MB5 LINE L1 0 6174 6056 2 933 36 0 0 0 chr15 45711609 45711645 -57783329 + AT_rich Low_complexity Low_complexity 1 36 0 2 933 1756 85 85 4 chr15 45711645 45711916 -57783058 + L1_Mus2 LINE L1 6274 6566 0 2 933 600 14 0 0 chr15 45712108 45712177 -57782797 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 933 944 239 67 49 chr15 45713087 45713559 -57781415 + RLTR24 LTR ERV1 1 424 -105 2 933 315 0 0 0 chr15 45713567 45713602 -57781372 + (TAA)n Simple_repeat Simple_repeat 2 36 0 2 933 14359 125 55 6 chr15 45713610 45716190 -57778784 + L1VL2 LINE L1 395 3129 -785 2 933 281 47 0 23 chr15 45716190 45716234 -57778740 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 2 933 14359 174 31 10 chr15 45716234 45716954 -57778020 + L1VL2 LINE L1 3130 3891 -2249 2 933 393 288 26 113 chr15 45716950 45717207 -57777767 + L1VL1 LINE L1 178 437 -5981 2 933 247 341 16 0 chr15 45717262 45717385 -57777589 + Lx LINE L1 679 803 -5813 2 933 2313 188 4 79 chr15 45717393 45717947 -57777027 + Lx LINE L1 725 1236 -5380 2 933 2671 121 9 0 chr15 45717913 45718360 -57776614 + MusHAL1 LINE L1 1 451 -2261 2 933 35450 36 0 5 chr15 45718363 45723373 -57771601 + L1Md_F2 LINE L1 625 5586 -297 2 933 7816 50 3 15 chr15 45723374 45724381 -57770593 + L1Md_F2 LINE L1 5588 6582 0 2 933 26086 126 9 6 chr15 45724391 45729301 -57765673 + L1_Mus2 LINE L1 1637 6563 -3 2 933 9939 184 25 13 chr15 45729304 45730526 -57764448 + Lx LINE L1 3845 5106 -777 2 933 941 124 7 0 chr15 45730526 45730663 -57764311 + B1_Mm SINE Alu 1 138 -9 3 933 293 0 0 26 chr15 45730663 45730701 -57764273 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 3 933 9939 184 25 13 chr15 45730701 45731338 -57763636 + Lx LINE L1 5107 5729 -154 2 933 4200 161 83 37 chr15 45731338 45732278 -57762696 - RLTR13C1 LTR ERVK 0 983 1 3 933 9939 139 32 12 chr15 45732278 45733053 -57761921 + Lx LINE L1 5730 6528 -126 2 933 2052 70 0 7 chr15 45733053 45733339 -57761635 - BGLII LTR ERVK -137 284 1 3 933 6953 118 31 83 chr15 45733339 45734609 -57760365 + RLTR22_Mur LTR ERVK 646 1848 0 3 933 21 36 0 0 chr15 45735642 45735670 -57759304 + AT_rich Low_complexity Low_complexity 1 28 0 3 933 473 213 24 0 chr15 45735689 45735816 -57759158 + Lx9 LINE L1 7514 7643 -1 3 933 354 123 0 0 chr15 45735888 45735945 -57759029 + (T)n Simple_repeat Simple_repeat 1 57 0 3 933 333 68 0 0 chr15 45736344 45736388 -57758586 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 3 933 577 157 0 0 chr15 45736389 45736491 -57758483 - Lx3A LINE L1 -6 6975 6874 3 933 247 335 151 17 chr15 45736491 45736670 -57758304 + MTD LTR MaLR 19 221 -198 3 933 219 154 0 55 chr15 45736777 45736832 -57758142 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 3 933 436 297 32 19 chr15 45736865 45737023 -57757951 - Lx8 LINE L1 -408 7065 6906 3 933 684 122 0 0 chr15 45737034 45737157 -57757817 + (TC)n Simple_repeat Simple_repeat 2 124 0 3 933 432 0 0 0 chr15 45737260 45737308 -57757666 + (TTA)n Simple_repeat Simple_repeat 1 48 0 3 933 560 323 20 15 chr15 45738217 45738415 -57756559 - RMER15 LTR ERVL -106 469 271 3 933 342 0 0 0 chr15 45738910 45738949 -57756025 - L1_Mm LINE L1 -95 5788 5750 3 933 2394 105 154 10 chr15 45738949 45739364 -57755610 + IAPLTR2_Mm LTR ERVK 1 475 0 3 933 13159 21 9 1 chr15 45739374 45741231 -57753743 + RLTR10-int LTR ERVK 41 1986 -1 3 933 2176 86 16 3 chr15 45741231 45741545 -57753429 + RLTR10 LTR ERVK 1 318 -72 3 933 259 82 0 39 chr15 45741582 45741633 -57753341 + RLTR10 LTR ERVK 259 307 -83 3 933 867 135 39 0 chr15 45741638 45741794 -57753180 + RLTR10 LTR ERVK 227 388 -2 3 933 1421 24 0 0 chr15 45741795 45741959 -57753015 - L1_Mm LINE L1 -127 5756 5593 3 933 4822 33 0 0 chr15 45741959 45742531 -57752443 + L1Md_T LINE L1 6009 6580 -2 3 933 262 0 67 44 chr15 45742640 45742685 -57752289 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 3 933 440 134 3 0 chr15 45743485 45743564 -57751410 - Lx LINE L1 -220 5657 5577 3 933 182 37 0 36 chr15 45743738 45743766 -57751208 + (TTCTCC)n Simple_repeat Simple_repeat 3 29 0 3 116 4104 175 65 58 chr15 45743877 45744854 -57750120 - RLTR13C1 LTR ERVK 0 983 1 3 934 5067 300 34 26 chr15 45745148 45746781 -57748193 + RodERV21-int LTR ERV1 1121 2766 -2225 3 934 187 83 26 53 chr15 45746786 45746824 -57748150 - L3 LINE CR1 -3168 1321 1285 3 934 503 326 31 52 chr15 45746906 45747352 -57747622 + RodERV21-int LTR ERV1 3638 4074 -3017 3 934 285 363 12 12 chr15 45747578 45747748 -57747226 + RLTR4_MM-int LTR ERV1 3470 3639 -3962 3 934 355 266 15 15 chr15 45748228 45748358 -57746616 + RodERV21-int LTR ERV1 4978 5107 -1984 3 934 346 307 53 6 chr15 45748751 45748981 -57745993 + RodERV21-int LTR ERV1 5675 5771 -1320 3 934 3485 344 38 49 chr15 45749155 45751071 -57743903 + RodERV21-int LTR ERV1 2694 4597 -394 3 934 2548 111 54 74 chr15 45751071 45751556 -57743418 + IAPLTR2_Mm LTR ERVK 1 475 0 3 934 3485 344 38 49 chr15 45751556 45751781 -57743193 + RodERV21-int LTR ERV1 4598 4812 -179 3 934 2349 157 37 17 chr15 45751924 45752379 -57742595 - Lx LINE L1 -598 5644 5160 3 934 6707 123 4 15 chr15 45752376 45753397 -57741577 + Lx LINE L1 5639 6648 -6 3 934 21 0 0 0 chr15 45753496 45753517 -57741457 + AT_rich Low_complexity Low_complexity 1 21 0 3 934 260 288 18 0 chr15 45753525 45753636 -57741338 - Lx9 LINE L1 -8 7636 7524 3 934 4055 141 26 14 chr15 45753696 45754359 -57740615 - Lx2 LINE L1 -2 6995 6325 3 934 414 94 0 0 chr15 45754502 45754566 -57740408 + (TG)n Simple_repeat Simple_repeat 2 65 0 3 934 260 371 74 14 chr15 45754596 45754812 -57740162 + L3 LINE CR1 2033 2261 -2228 3 934 28 0 0 0 chr15 45754990 45755018 -57739956 + AT_rich Low_complexity Low_complexity 1 28 0 3 934 307 183 17 0 chr15 45755075 45755135 -57739839 + MTC LTR MaLR 5 65 -356 3 934 558 29 0 0 chr15 45755136 45755204 -57739770 + (GAAA)n Simple_repeat Simple_repeat 1 68 0 3 934 994 316 35 26 chr15 45755229 45755658 -57739316 + Lx6 LINE L1 5897 6355 -695 3 934 216 289 19 0 chr15 45755765 45755817 -57739157 + B3 SINE B2 77 129 -87 3 934 1014 102 7 0 chr15 45757068 45757215 -57737759 + B1_Mus1 SINE Alu 1 148 0 3 934 200 31 62 0 chr15 45757217 45757249 -57737725 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 3 934 192 40 0 0 chr15 45757243 45757268 -57737706 + (CAA)n Simple_repeat Simple_repeat 1 25 0 3 934 954 215 40 13 chr15 45757526 45757752 -57737222 + Lx4B LINE L1 6819 7050 -8 3 934 1068 324 152 21 chr15 45757885 45758607 -57736367 + Lx8 LINE L1 6654 7470 -3 3 934 759 86 0 0 chr15 45760622 45760739 -57734235 + (TC)n Simple_repeat Simple_repeat 1 117 0 3 934 2969 34 0 0 chr15 45760895 45761251 -57733723 - L1Md_T LINE L1 -2181 3702 3347 3 934 15525 22 4 0 chr15 45761228 45763052 -57731922 + L1Md_T LINE L1 3756 5586 -297 3 934 8943 7 0 0 chr15 45763052 45764079 -57730895 + L1Md_T LINE L1 5587 6582 0 3 934 234 374 104 26 chr15 45764189 45764573 -57730401 - L2 LINE L2 -1122 2297 1884 3 934 974 319 60 85 chr15 45765089 45765585 -57729389 - Lx5 LINE L1 0 7050 6567 3 934 3239 214 16 6 chr15 45765581 45766820 -57728154 - Lx5 LINE L1 -767 6693 5188 3 934 2111 196 92 4 chr15 45766816 45767239 -57727735 - Lx5 LINE L1 -1232 4645 4215 3 934 510 17 0 0 chr15 45767239 45767298 -57727676 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 934 2111 196 92 4 chr15 45767298 45767377 -57727597 - Lx5 LINE L1 -1663 4214 4101 3 934 32 0 0 0 chr15 45767558 45767590 -57727384 + AT_rich Low_complexity Low_complexity 1 32 0 3 934 32 0 0 0 chr15 45767868 45767900 -57727074 + AT_rich Low_complexity Low_complexity 1 32 0 3 934 25 0 0 0 chr15 45768208 45768233 -57726741 + AT_rich Low_complexity Low_complexity 1 25 0 3 934 234 383 0 41 chr15 45768315 45768413 -57726561 - B3 SINE B2 -114 102 9 3 934 360 0 0 0 chr15 45768414 45768454 -57726520 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 934 23 33 0 0 chr15 45768585 45768615 -57726359 + AT_rich Low_complexity Low_complexity 1 30 0 3 934 1205 92 14 33 chr15 45770946 45771159 -57723815 + L1Md_F2 LINE L1 6374 6582 0 3 934 4153 177 7 16 chr15 45771523 45772296 -57722678 + Lx2 LINE L1 6231 6996 -1 3 934 23 0 0 0 chr15 45772322 45772345 -57722629 + AT_rich Low_complexity Low_complexity 1 23 0 3 934 804 124 6 137 chr15 45772452 45772620 -57722354 - B1_Mus1 SINE Alu -1 147 2 3 934 4474 151 5 12 chr15 45773021 45773772 -57721202 - Lx3A LINE L1 -7 6974 6229 3 934 539 206 151 0 chr15 45773773 45773899 -57721075 - B1_Mus1 SINE Alu -1 147 3 3 934 234 0 0 0 chr15 45774829 45774855 -57720119 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 934 457 326 15 15 chr15 45775038 45775175 -57719799 + B1_Mur1 SINE Alu 12 148 -1 3 934 4263 143 54 13 chr15 45776059 45776836 -57718138 - RMER17D2 LTR ERVK 0 809 1 3 934 26 0 0 0 chr15 45777045 45777071 -57717903 + AT_rich Low_complexity Low_complexity 1 26 0 3 934 540 176 0 0 chr15 45777302 45777404 -57717570 + (TA)n Simple_repeat Simple_repeat 2 103 0 3 934 1985 195 108 31 chr15 45777441 45777922 -57717052 + RLTR11A LTR ERVK 11 528 0 3 934 25 75 0 0 chr15 45778244 45778297 -57716677 + AT_rich Low_complexity Low_complexity 1 53 0 3 934 271 305 14 24 chr15 45779256 45779348 -57715626 + PB1D10 SINE Alu 1 97 -52 3 934 1015 218 27 5 chr15 45779538 45779759 -57715215 - URR1A DNA MER1_type 0 226 1 3 934 2897 166 58 43 chr15 45780347 45781020 -57713954 + RMER6C LTR ERVK 4 686 -4 3 934 3815 220 9 152 chr15 45781063 45781844 -57713130 - L1_Mur2 LINE L1 -713 5164 4566 3 934 480 18 0 0 chr15 45781844 45781901 -57713073 + (TAA)n Simple_repeat Simple_repeat 1 57 0 3 934 3815 220 9 152 chr15 45781901 45782367 -57712607 - L1_Mur2 LINE L1 -1312 4565 4116 3 934 360 0 0 0 chr15 45782367 45782407 -57712567 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 3 934 3815 220 9 152 chr15 45782407 45782570 -57712404 - L1_Mur2 LINE L1 -1762 4115 3954 3 934 977 280 171 8 chr15 45782592 45782984 -57711990 + Lx6 LINE L1 6979 7434 -26 3 934 183 114 0 0 chr15 45782985 45783020 -57711954 + (CCAA)n Simple_repeat Simple_repeat 2 36 0 3 934 8035 49 7 1 chr15 45783535 45785241 -57709733 - L1Md_F3 LINE L1 -14 6570 4855 3 934 24 0 0 0 chr15 45785277 45785301 -57709673 + AT_rich Low_complexity Low_complexity 1 24 0 3 934 189 159 0 0 chr15 45785580 45785624 -57709350 + A-rich Low_complexity Low_complexity 1 44 0 3 934 2918 189 49 15 chr15 45786264 45786923 -57708051 + Lx5 LINE L1 4686 5366 -511 3 934 4155 68 7 0 chr15 45786910 45787450 -57707524 - L1Md_F2 LINE L1 -425 6157 5614 3 934 2960 78 9 31 chr15 45787450 45787873 -57707101 + L1Md_F2 LINE L1 6169 6582 0 3 934 3457 214 104 6 chr15 45787873 45789404 -57705570 + Lx5 LINE L1 5356 7047 -3 3 934 4105 87 20 17 chr15 45789613 45790199 -57704775 - L1Md_F2 LINE L1 -14 6568 5981 3 934 7031 82 2 16 chr15 45790199 45791876 -57703098 - L1Md_F LINE L1 -3661 2222 570 3 934 218 115 62 47 chr15 45792274 45792338 -57702636 + (ATATG)n Simple_repeat Simple_repeat 4 68 0 3 934 480 35 0 0 chr15 45792869 45792927 -57702047 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 934 207 0 0 0 chr15 45792927 45792949 -57702025 + (GA)n Simple_repeat Simple_repeat 2 24 0 3 934 22 35 0 0 chr15 45793068 45793097 -57701877 + AT_rich Low_complexity Low_complexity 1 29 0 3 934 204 158 0 0 chr15 45793996 45794034 -57700940 + GA-rich Low_complexity Low_complexity 2 39 0 3 934 6888 101 18 2 chr15 45795004 45796695 -57698279 + L1_Mus2 LINE L1 4844 6564 -2 3 934 2388 150 14 69 chr15 45796724 45797583 -57697391 - L1Md_F LINE L1 -2389 1428 629 3 934 461 255 21 14 chr15 45797577 45797720 -57697254 - L1Md_F LINE L1 -5798 721 578 3 934 354 180 29 196 chr15 45797792 45797930 -57697044 - L1VL1 LINE L1 -6060 362 248 3 934 1897 222 82 27 chr15 45797956 45798515 -57696459 + RMER6C LTR ERVK 97 686 -4 3 934 387 0 0 0 chr15 45798768 45798811 -57696163 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 934 315 0 0 0 chr15 45798827 45798862 -57696112 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 934 482 259 8 0 chr15 45798882 45799013 -57695961 - Lx9 LINE L1 -183 7461 7330 3 934 402 267 148 0 chr15 45799055 45799190 -57695784 + Lx9 LINE L1 6364 6518 -1126 4 934 502 328 55 70 chr15 45799352 45799824 -57695150 + Lx5 LINE L1 22 486 -7242 4 934 2915 233 43 22 chr15 45799857 45800523 -57694451 + Lx5 LINE L1 1375 2062 -3815 4 934 616 56 22 0 chr15 45800523 45800612 -57694362 + (CA)n Simple_repeat Simple_repeat 1 91 0 4 934 2915 233 43 22 chr15 45800612 45800826 -57694148 + Lx5 LINE L1 2063 2274 -3603 4 934 4661 213 48 5 chr15 45800825 45801939 -57693035 + Lx5 LINE L1 3768 4929 -948 4 934 1808 266 62 19 chr15 45801952 45802706 -57692268 + Lx5 LINE L1 5284 6099 -951 4 934 383 20 0 38 chr15 45803188 45803241 -57691733 + (CAAAAA)n Simple_repeat Simple_repeat 2 52 0 4 934 293 280 21 11 chr15 45803899 45803993 -57690981 - MTEb LTR MaLR -7 372 278 4 934 2334 87 30 3 chr15 45804254 45804590 -57690384 + IAPLTR4 LTR ERVK 1 345 0 4 934 903 237 21 34 chr15 45805226 45805462 -57689512 + Lx9 LINE L1 7173 7405 -239 4 934 230 235 11 23 chr15 45805459 45805546 -57689428 + Lx9 LINE L1 7543 7628 -16 4 934 526 268 1 9 chr15 45805626 45805750 -57689224 - B3 SINE B2 -74 119 1 4 934 287 311 29 19 chr15 45806431 45806536 -57688438 + B3A SINE B2 1 106 -92 4 934 25 0 0 0 chr15 45806568 45806593 -57688381 + AT_rich Low_complexity Low_complexity 1 25 0 4 934 22 0 0 0 chr15 45806806 45806828 -57688146 + AT_rich Low_complexity Low_complexity 1 22 0 4 934 23 0 0 0 chr15 45807089 45807112 -57687862 + AT_rich Low_complexity Low_complexity 1 23 0 4 934 22 0 0 0 chr15 45807325 45807347 -57687627 + AT_rich Low_complexity Low_complexity 1 22 0 4 934 1408 278 57 86 chr15 45807382 45808051 -57686923 - Lx6 LINE L1 -731 6729 5791 4 934 404 19 0 19 chr15 45808051 45808105 -57686869 + (TTTA)n Simple_repeat Simple_repeat 1 53 0 4 934 1408 275 36 98 chr15 45808105 45808230 -57686744 - Lx6 LINE L1 -1670 5790 5701 4 934 969 57 0 0 chr15 45808337 45808461 -57686513 + (GA)n Simple_repeat Simple_repeat 2 125 0 4 934 822 378 9 6 chr15 45808473 45808811 -57686163 + Lx6 LINE L1 6920 7258 -202 4 934 1529 260 22 44 chr15 45808783 45809234 -57685740 - Lx6 LINE L1 -569 6891 6451 4 934 414 299 67 22 chr15 45809235 45809413 -57685561 - Lx6 LINE L1 -1403 6057 5872 4 934 447 107 0 0 chr15 45809413 45809488 -57685486 + (TG)n Simple_repeat Simple_repeat 2 76 0 4 934 270 0 0 0 chr15 45809488 45809518 -57685456 + (TA)n Simple_repeat Simple_repeat 2 31 0 4 934 267 31 0 0 chr15 45810190 45810222 -57684752 + (TCC)n Simple_repeat Simple_repeat 1 32 0 4 934 5105 221 59 70 chr15 45811622 45812117 -57682857 - Lx6 LINE L1 -88 5792 5270 4 934 783 21 0 0 chr15 45812117 45812210 -57682764 + (TG)n Simple_repeat Simple_repeat 2 94 0 4 934 483 18 0 0 chr15 45812210 45812265 -57682709 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 934 5105 221 59 70 chr15 45812265 45812991 -57681983 - Lx6 LINE L1 -611 5269 4624 4 934 429 20 0 0 chr15 45812991 45813041 -57681933 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 934 5105 221 59 70 chr15 45813041 45813568 -57681406 - Lx6 LINE L1 -1257 4623 4062 4 934 219 139 0 0 chr15 45814219 45814255 -57680719 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 4 934 847 276 42 64 chr15 45814307 45814620 -57680354 - Lx9 LINE L1 -278 7366 7061 4 934 257 314 92 7 chr15 45815039 45815180 -57679794 - L1MCa LINE L1 -6307 201 49 4 934 484 284 0 7 chr15 45816518 45816667 -57678307 + Lx6 LINE L1 7304 7451 -9 4 934 202 263 0 26 chr15 45816667 45816686 -57678288 + polypurine Low_complexity Low_complexity 1 18 0 4 934 468 0 0 0 chr15 45816686 45816738 -57678236 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 934 202 263 0 26 chr15 45816738 45816796 -57678178 + GA-rich Low_complexity Low_complexity 19 75 0 4 934 8194 126 44 11 chr15 45816937 45817787 -57677187 + Lx3A LINE L1 5199 6062 -919 4 934 306 0 0 0 chr15 45817787 45817821 -57677153 + (GGAGA)n Simple_repeat Simple_repeat 4 37 0 4 934 8194 130 27 35 chr15 45817821 45818733 -57676241 + Lx3A LINE L1 6063 6967 -14 4 934 342 0 0 0 chr15 45818733 45818771 -57676203 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 4 934 427 286 28 25 chr15 45818809 45819014 -57675960 + L1VL1 LINE L1 84 442 -5976 4 934 7508 103 14 2 chr15 45819006 45820829 -57674145 + L1_Mus2 LINE L1 4717 6565 -1 4 934 868 234 149 0 chr15 45820836 45821084 -57673890 + RCHARR1 DNA MER1_type 521 805 -169 4 934 238 283 0 0 chr15 45821758 45821811 -57673163 + ORR1D2 LTR MaLR 6 58 -301 4 934 321 326 33 78 chr15 45821813 45821966 -57673008 + ORR1D2 LTR MaLR 36 181 -189 4 934 438 216 0 89 chr15 45821990 45822102 -57672872 + ORR1D2 LTR MaLR 260 361 -9 4 934 579 350 99 80 chr15 45822235 45822822 -57672152 + L1M4c LINE L1 1056 1653 -4731 4 934 38878 33 2 6 chr15 45823405 45829593 -57665381 - L1Md_T LINE L1 -1 6581 423 4 934 182 37 0 36 chr15 45830846 45830874 -57664100 + (TTG)n Simple_repeat Simple_repeat 2 28 0 4 934 333 0 0 0 chr15 45831823 45831860 -57663114 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 934 24 53 0 0 chr15 45832256 45832294 -57662680 + AT_rich Low_complexity Low_complexity 1 38 0 4 934 26 64 0 0 chr15 45832341 45832388 -57662586 + AT_rich Low_complexity Low_complexity 1 47 0 4 934 23 33 0 0 chr15 45832827 45832857 -57662117 + AT_rich Low_complexity Low_complexity 1 30 0 4 934 536 243 99 70 chr15 45832956 45833199 -57661775 + Lx6 LINE L1 7211 7460 0 4 934 23 54 0 0 chr15 45833235 45833272 -57661702 + AT_rich Low_complexity Low_complexity 1 37 0 4 934 4936 197 43 7 chr15 45833311 45835014 -57659960 - Lx2B LINE L1 -4 6972 5135 4 934 9903 109 8 9 chr15 45835272 45837499 -57657475 + L1_Mus1 LINE L1 4337 6554 -13 4 934 293 0 0 26 chr15 45837499 45837537 -57657437 + (TAA)n Simple_repeat Simple_repeat 3 39 0 4 934 340 236 28 0 chr15 45837704 45837810 -57657164 + L1MEc LINE L1 749 857 -5543 4 934 5831 185 9 15 chr15 45838152 45839797 -57655177 - L1VL2 LINE L1 -1537 2078 444 4 934 24 67 0 0 chr15 45840177 45840222 -57654752 + AT_rich Low_complexity Low_complexity 1 45 0 4 934 25 0 0 0 chr15 45841711 45841736 -57653238 + AT_rich Low_complexity Low_complexity 1 25 0 4 934 1927 148 77 19 chr15 45842739 45843103 -57651871 - Lx LINE L1 -2 6652 6268 4 934 675 276 53 6 chr15 45843103 45843274 -57651700 + B3 SINE B2 35 213 -3 4 934 21 71 0 0 chr15 45843324 45843366 -57651608 + AT_rich Low_complexity Low_complexity 1 42 0 4 934 22 35 0 0 chr15 45843713 45843742 -57651232 + AT_rich Low_complexity Low_complexity 1 29 0 4 934 449 202 22 0 chr15 45843833 45843921 -57651053 - B1_Mur2 SINE Alu 0 149 60 4 934 553 233 29 78 chr15 45843921 45844135 -57650839 - RLTR9A LTR ERVK -2 401 195 4 934 196 53 26 26 chr15 45844233 45844272 -57650702 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 4 934 3504 207 115 14 chr15 45844776 45845670 -57649304 - ETnERV2-int LTR ERVK -1202 6204 5220 4 934 1149 75 0 0 chr15 45845671 45845817 -57649157 + B1_Mm SINE Alu 2 147 0 4 934 3629 283 50 31 chr15 45845896 45848083 -57646891 - ETnERV2-int LTR ERVK -2600 4806 1787 4 934 2988 83 2 8 chr15 45848221 45848623 -57646351 + MTB LTR MaLR 1 400 0 4 934 7556 134 45 33 chr15 45848624 45850588 -57644386 - Lx3_Mus LINE L1 -2 7007 5022 4 934 5035 171 109 22 chr15 45850589 45852255 -57642719 - Lx3_Mus LINE L1 -3863 2023 213 4 934 660 291 4 23 chr15 45852338 45852628 -57642346 - ETnERV2-int LTR ERVK -5069 2337 2195 4 934 3480 189 13 17 chr15 45852729 45853418 -57641556 - RMER16-int LTR ERVK -3822 1584 899 4 934 491 301 82 41 chr15 45853683 45853926 -57641048 - RLTR9A LTR ERVK -2 366 114 4 934 402 21 0 0 chr15 45854194 45854241 -57640733 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 934 302 61 0 20 chr15 45854459 45854509 -57640465 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 4 934 445 289 97 26 chr15 45854514 45854709 -57640265 + B3 SINE B2 3 211 -5 4 934 478 331 109 19 chr15 45854733 45855312 -57639662 + L1MA5 LINE L1 5595 6225 -75 4 934 21 0 0 0 chr15 45855914 45855935 -57639039 + AT_rich Low_complexity Low_complexity 1 21 0 4 934 25 0 0 0 chr15 45855983 45856008 -57638966 + AT_rich Low_complexity Low_complexity 1 25 0 4 934 1248 294 131 25 chr15 45856567 45857390 -57637584 - RCHARR1 DNA MER1_type 0 974 65 4 934 548 143 10 0 chr15 45857603 45857701 -57637273 + (CA)n Simple_repeat Simple_repeat 2 100 0 4 934 33477 72 0 16 chr15 45857772 45862929 -57632045 + L1Md_F LINE L1 511 5586 -297 4 934 7548 69 6 3 chr15 45862929 45863919 -57631055 + L1Md_F2 LINE L1 5587 6579 -3 4 934 33477 66 0 1 chr15 45863919 45863934 -57631040 + L1Md_F LINE L1 5587 5600 -283 4 934 11306 117 20 21 chr15 45863920 45864763 -57630211 + L1_Mur1 LINE L1 3977 4829 -1057 4 934 1115 88 0 0 chr15 45864763 45864910 -57630064 - B1_Mus1 SINE Alu 0 148 2 4 934 11306 117 20 21 chr15 45864910 45865885 -57629089 + L1_Mur1 LINE L1 4830 5793 -93 4 934 931 97 148 0 chr15 45865885 45866040 -57628934 + B2_Mm2 SINE B2 11 188 -7 4 934 705 227 12 43 chr15 45866047 45866208 -57628766 + B3 SINE B2 1 156 -60 4 934 219 135 0 0 chr15 45866396 45866433 -57628541 + B1_Mus1 SINE Alu 19 55 -93 4 934 281 319 61 82 chr15 45866443 45866561 -57628413 + L1MC4 LINE L1 7570 7687 -355 4 934 383 307 0 9 chr15 45866561 45866676 -57628298 + PB1D10 SINE Alu 2 115 -2 4 934 281 319 61 82 chr15 45866676 45866885 -57628089 + L1MC4 LINE L1 7688 7890 -152 4 934 3539 140 10 23 chr15 45867109 45867722 -57627252 + Lx3A LINE L1 5783 6387 -594 4 934 1253 252 45 100 chr15 45867747 45868560 -57626414 - RMER17B LTR ERVK -3 857 274 4 934 1660 170 7 28 chr15 45868560 45868844 -57626130 - Lx2B LINE L1 -132 6868 6591 4 934 944 170 225 27 chr15 45868846 45869160 -57625814 - RLTR9E LTR ERVK -29 408 1 4 934 484 67 25 62 chr15 45869162 45869242 -57625732 - ETnERV2-int LTR ERVK -3 7403 7327 4 934 649 202 247 12 chr15 45869246 45869519 -57625455 - RLTR13D6 LTR ERVK -371 531 192 4 934 20974 114 31 40 chr15 45869519 45869924 -57625050 - ETnERV2-int LTR ERVK -229 7177 6712 4 934 182 109 19 115 chr15 45869924 45869976 -57624998 + L4 LINE RTE 662 708 -1321 4 934 20974 114 31 40 chr15 45869976 45872789 -57622185 - ETnERV2-int LTR ERVK -229 6711 3471 4 934 260 207 0 0 chr15 45872806 45872864 -57622110 + RNERVK23-int LTR ERVK 3345 3402 -4815 4 116 10191 239 33 20 chr15 45872859 45875847 -57619127 - ETnERV2-int LTR ERVK -3269 2898 2 4 935 1073 221 138 32 chr15 45875848 45876218 -57618756 - RLTR9E LTR ERVK 0 409 1 4 935 2340 215 26 8 chr15 45876218 45876596 -57618378 - Lx2B LINE L1 -420 6580 6190 4 935 423 0 0 0 chr15 45876596 45876643 -57618331 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 935 2340 215 26 8 chr15 45876643 45876762 -57618212 - Lx2B LINE L1 -811 6189 6075 4 935 2376 273 25 105 chr15 45876778 45877800 -57617174 + RMER17B LTR ERVK 1 941 -17 4 935 2232 143 9 82 chr15 45877800 45878288 -57616686 - Lx2B LINE L1 -999 6001 5549 4 935 4828 192 18 34 chr15 45878286 45879410 -57615564 + Lx2B LINE L1 4464 5569 -308 4 935 189 74 0 0 chr15 45879540 45879567 -57615407 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 935 249 246 0 0 chr15 45879597 45879658 -57615316 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 935 2263 133 3 11 chr15 45880049 45880413 -57614561 - L1_Mur2 LINE L1 0 5877 5517 4 935 3000 196 14 10 chr15 45880414 45880996 -57613978 + Lx4A LINE L1 6463 7046 -12 4 935 500 0 0 16 chr15 45880996 45881057 -57613917 + (TAA)n Simple_repeat Simple_repeat 2 61 0 4 935 8094 147 19 37 chr15 45881764 45882653 -57612321 - Lx2 LINE L1 -15 6982 6085 4 935 2991 29 0 0 chr15 45882653 45882999 -57611975 - ORR1A0 LTR MaLR 0 346 1 5 935 8094 176 18 39 chr15 45882999 45884024 -57610950 - Lx2 LINE L1 -913 6084 5095 4 935 3106 176 16 5 chr15 45884018 45884630 -57610344 + Lx2 LINE L1 4484 5102 -784 4 935 1468 278 9 102 chr15 45885722 45886220 -57608754 - Lx7 LINE L1 0 7696 7253 5 935 1001 110 0 7 chr15 45886220 45886366 -57608608 + B1_Mus1 SINE Alu 2 146 -2 5 935 1468 278 9 102 chr15 45886366 45886553 -57608421 - Lx7 LINE L1 -444 7252 7075 5 935 1240 53 6 6 chr15 45886751 45886921 -57608053 + (TCTA)n Simple_repeat Simple_repeat 4 173 0 5 935 29 47 0 0 chr15 45887007 45887050 -57607924 + AT_rich Low_complexity Low_complexity 1 43 0 5 935 480 169 150 34 chr15 45887181 45887285 -57607689 - Lx LINE L1 -8 6646 6538 5 935 378 0 0 0 chr15 45887285 45887327 -57607647 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 935 480 169 150 34 chr15 45887327 45887369 -57607605 - Lx LINE L1 -117 6537 6483 5 935 336 369 149 28 chr15 45887752 45888000 -57606974 + B4A SINE B4 3 280 -12 5 935 480 126 0 0 chr15 45888000 45888087 -57606887 + (CA)n Simple_repeat Simple_repeat 2 88 0 5 935 479 86 14 0 chr15 45888235 45888305 -57606669 + Lx3A LINE L1 5669 5739 -1242 5 935 373 246 103 0 chr15 45889340 45889466 -57605508 + Lx9 LINE L1 7360 7498 -146 5 935 6793 179 39 124 chr15 45889496 45891711 -57603263 - Lx4A LINE L1 -3 7055 5013 5 935 617 319 30 21 chr15 45891996 45892230 -57602744 - RLTR16 LTR ERVK -246 259 24 5 935 6411 151 34 30 chr15 45892237 45893548 -57601426 - L1_Mur2 LINE L1 -860 5017 3703 5 935 2406 184 2 0 chr15 45893547 45893976 -57600998 - Lx2 LINE L1 -476 6521 6092 5 935 2275 146 61 2 chr15 45893975 45894402 -57600572 - L1_Mur2 LINE L1 -3343 2534 2083 5 935 757 142 7 7 chr15 45894511 45894653 -57600321 + CT-rich Low_complexity Low_complexity 2 143 0 5 935 252 0 0 0 chr15 45894821 45894849 -57600125 + (A)n Simple_repeat Simple_repeat 1 28 0 5 935 264 224 17 0 chr15 45895058 45895116 -57599858 + (TATG)n Simple_repeat Simple_repeat 1 59 0 5 935 375 23 0 0 chr15 45895272 45895316 -57599658 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 935 198 188 0 0 chr15 45897638 45897658 -57597316 + A-rich Low_complexity Low_complexity 1 20 0 5 935 1167 55 0 7 chr15 45897658 45897805 -57597169 + B1_Mm SINE Alu 2 147 0 5 935 198 188 0 0 chr15 45897805 45897848 -57597126 + A-rich Low_complexity Low_complexity 21 63 0 5 935 24 32 0 0 chr15 45898576 45898607 -57596367 + AT_rich Low_complexity Low_complexity 1 31 0 5 935 391 309 216 34 chr15 45898746 45899100 -57595874 + MTD LTR MaLR 1 419 0 5 935 373 328 16 89 chr15 45899249 45899378 -57595596 - Lx8 LINE L1 -142 7331 7214 5 935 1034 38 0 0 chr15 45899378 45899511 -57595463 - L1Md_F2 LINE L1 -14 6568 6436 5 935 373 328 16 89 chr15 45899511 45899572 -57595402 - Lx8 LINE L1 -260 7213 7155 5 935 808 147 7 7 chr15 45899590 45899741 -57595233 + CT-rich Low_complexity Low_complexity 2 152 0 5 935 5418 129 10 20 chr15 45899742 45900661 -57594313 - Lx3A LINE L1 0 6981 6072 5 935 537 251 122 50 chr15 45900686 45900908 -57594066 - Lx8 LINE L1 -293 7180 6943 5 935 525 104 0 0 chr15 45900913 45900990 -57593984 + (TA)n Simple_repeat Simple_repeat 2 78 0 5 935 932 318 59 20 chr15 45900990 45901478 -57593496 - Lx8 LINE L1 -548 6925 6419 5 935 1627 257 22 15 chr15 45901884 45902291 -57592683 - MTC LTR MaLR 0 421 12 5 935 279 0 0 0 chr15 45902585 45902616 -57592358 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 5 935 212 233 33 0 chr15 45902836 45902896 -57592078 + (TCTA)n Simple_repeat Simple_repeat 2 63 0 5 935 874 352 118 21 chr15 45902906 45903584 -57591390 - Lx8 LINE L1 -253 7220 6477 5 935 24214 113 22 7 chr15 45905034 45906520 -57588454 - L1_Mus3 LINE L1 -175 6463 4926 5 935 903 127 7 0 chr15 45906520 45906662 -57588312 + B1_Mus1 SINE Alu 3 145 -3 5 935 24214 155 45 14 chr15 45906662 45906998 -57587976 - L1_Mus3 LINE L1 -958 4925 4632 5 935 330 26 0 0 chr15 45906998 45907037 -57587937 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 935 24214 155 45 14 chr15 45907037 45908931 -57586043 - L1_Mus3 LINE L1 -1252 4631 2655 5 935 585 0 0 0 chr15 45908931 45908996 -57585978 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 935 24214 163 41 14 chr15 45908996 45910757 -57584217 - L1_Mus3 LINE L1 -3229 2654 846 5 935 3631 140 15 72 chr15 45910757 45911551 -57583423 - RMER17A LTR ERVK 0 751 3 5 935 4836 193 24 13 chr15 45911551 45912033 -57582941 - L1_Mus3 LINE L1 -5789 845 352 5 935 22 56 0 0 chr15 45912584 45912620 -57582354 + AT_rich Low_complexity Low_complexity 1 36 0 5 935 4426 189 36 28 chr15 45913363 45914401 -57580573 + L1Md_F2 LINE L1 5530 6580 -2 5 935 470 360 7 0 chr15 45914675 45914814 -57580160 + RSINE1 SINE B4 1 140 -25 5 935 5108 157 5 27 chr15 45915055 45915562 -57579412 + L1_Mm LINE L1 4874 5380 -503 5 935 960 117 0 14 chr15 45915562 45915709 -57579265 + B1_Mm SINE Alu 2 146 -1 5 935 5108 157 5 27 chr15 45915709 45916130 -57578844 + L1_Mm LINE L1 5381 5782 -101 5 935 5760 101 15 9 chr15 45916735 45917604 -57577370 + L1_Mus3 LINE L1 5765 6638 0 5 935 242 73 0 24 chr15 45917921 45917934 -57577040 + (TTA)n Simple_repeat Simple_repeat 3 15 0 5 935 348 24 0 0 chr15 45917934 45917975 -57576999 + (TAG)n Simple_repeat Simple_repeat 1 41 0 5 935 242 73 0 24 chr15 45917975 45918003 -57576971 + (TTA)n Simple_repeat Simple_repeat 2 29 0 5 935 309 350 120 20 chr15 45918062 45918354 -57576620 + L1MD LINE L1 3512 3832 -2314 5 935 269 301 84 42 chr15 45918503 45918718 -57576256 + L1MC LINE L1 3984 4207 -1939 5 935 1039 270 89 51 chr15 45918803 45919174 -57575800 + MTD LTR MaLR 1 385 -34 5 935 217 68 45 0 chr15 45919177 45919221 -57575753 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 5 935 210 343 65 19 chr15 45919588 45919695 -57575279 + PB1D10 SINE Alu 6 117 0 5 935 31 26 0 0 chr15 45921775 45921813 -57573161 + AT_rich Low_complexity Low_complexity 1 38 0 5 935 33 80 0 0 chr15 45921918 45921993 -57572981 + AT_rich Low_complexity Low_complexity 1 75 0 5 935 233 109 22 0 chr15 45922104 45922150 -57572824 + (TTTTTG)n Simple_repeat Simple_repeat 4 50 0 5 935 3091 39 8 0 chr15 45922291 45922675 -57572299 + L1Md_F3 LINE L1 6196 6582 -2 5 935 1128 62 7 0 chr15 45922942 45923087 -57571887 + B1_Mus2 SINE Alu 1 146 -1 5 935 273 125 0 0 chr15 45923088 45923144 -57571830 + (A)n Simple_repeat Simple_repeat 1 56 0 5 935 719 79 0 10 chr15 45923265 45923367 -57571607 + B2_Mm2 SINE B2 1 101 -94 5 935 180 0 0 0 chr15 45923393 45923413 -57571561 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 5 935 1038 202 22 97 chr15 45924027 45924295 -57570679 + ORR1A4 LTR MaLR 74 321 -8 5 935 28 48 0 0 chr15 45925127 45925169 -57569805 + AT_rich Low_complexity Low_complexity 1 42 0 5 935 1957 216 69 52 chr15 45925334 45925872 -57569102 + RLTR20B1 LTR ERVK 2 548 -15 5 935 25 31 0 0 chr15 45925905 45925937 -57569037 + AT_rich Low_complexity Low_complexity 1 32 0 5 935 398 299 22 11 chr15 45926194 45926342 -57568632 + MTE2a LTR MaLR 213 371 -8 5 935 4255 121 5 3 chr15 45926408 45927056 -57567918 + L1_Mus3 LINE L1 5990 6638 0 5 935 219 103 0 0 chr15 45927078 45927117 -57567857 + (A)n Simple_repeat Simple_repeat 1 39 0 5 935 631 309 16 0 chr15 45927306 45927494 -57567480 - B3 SINE B2 -11 205 15 5 935 405 313 108 75 chr15 45927593 45928221 -57566753 + L1MC2 LINE L1 4740 5388 -758 5 935 334 293 83 23 chr15 45928359 45928624 -57566350 + L1MC2 LINE L1 5659 5939 -405 5 935 4811 158 19 49 chr15 45928760 45930521 -57564453 + L1VL4 LINE L1 148 1912 -1905 5 935 3711 110 0 0 chr15 45930522 45931050 -57563924 + L1_Mus2 LINE L1 6039 6566 0 5 935 32 67 0 0 chr15 45931092 45931152 -57563822 + AT_rich Low_complexity Low_complexity 1 60 0 5 935 258 32 0 0 chr15 45932280 45932311 -57562663 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 935 191 36 36 0 chr15 45932748 45932776 -57562198 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 935 217 132 0 0 chr15 45933474 45933512 -57561462 + (TTAAA)n Simple_repeat Simple_repeat 1 38 0 5 935 422 273 6 75 chr15 45933524 45933698 -57561276 - Lx9 LINE L1 -190 7454 7293 5 935 360 0 0 0 chr15 45933854 45933894 -57561080 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 935 541 333 86 12 chr15 45934608 45934863 -57560111 - RMER15 LTR ERVL -2 573 300 5 935 200 59 29 0 chr15 45935613 45935647 -57559327 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 5 935 412 322 8 0 chr15 45935665 45935783 -57559191 - RSINE1 SINE B4 -33 132 14 5 935 22 0 0 0 chr15 45936641 45936663 -57558311 + AT_rich Low_complexity Low_complexity 1 22 0 5 935 22 56 0 0 chr15 45937342 45937378 -57557596 + AT_rich Low_complexity Low_complexity 1 36 0 5 935 2226 269 2 47 chr15 45937383 45937975 -57556999 - Lx2B LINE L1 -78 6922 6358 5 935 689 293 107 55 chr15 45938263 45939035 -57555939 + L1MA4 LINE L1 4578 5405 -475 5 935 1874 162 57 11 chr15 45939035 45939385 -57555589 + Lx4A LINE L1 6693 7058 0 5 935 330 295 133 25 chr15 45939385 45939532 -57555442 + L1MA4 LINE L1 5406 5604 -699 5 935 5364 123 20 22 chr15 45939532 45940436 -57554538 + RLTR13D6 LTR ERVK 1 902 0 5 935 330 288 133 18 chr15 45940436 45940541 -57554433 + L1MA4 LINE L1 5605 5709 -594 5 935 1013 86 7 0 chr15 45940573 45940712 -57554262 + B1_Mus1 SINE Alu 9 148 0 5 935 308 284 93 31 chr15 45940731 45940987 -57553987 + L1MA4 LINE L1 5748 6014 -286 5 935 288 0 0 0 chr15 45941559 45941591 -57553383 + (TAA)n Simple_repeat Simple_repeat 3 34 0 5 935 53 57 0 0 chr15 45943054 45943142 -57551832 + AT_rich Low_complexity Low_complexity 1 88 0 5 935 195 42 0 0 chr15 45943215 45943239 -57551735 + (TTAGGG)n Simple_repeat Simple_repeat 4 27 0 5 935 22 0 0 0 chr15 45943477 45943499 -57551475 + AT_rich Low_complexity Low_complexity 1 22 0 5 935 821 245 88 3 chr15 45943624 45943907 -57551067 + RCHARR1 DNA MER1_type 658 964 -10 5 935 285 358 75 93 chr15 45944111 45944391 -57550583 - B4A SINE B4 -17 275 1 5 935 1410 292 42 14 chr15 45944917 45945347 -57549627 - Lx6 LINE L1 -28 7432 6991 5 935 3008 280 91 40 chr15 45945348 45946492 -57548482 - Lx7 LINE L1 -35 7661 6460 5 935 490 235 0 0 chr15 45946489 45946574 -57548400 + RMER1B Other Other 619 703 -363 5 935 276 442 19 31 chr15 45946795 45946954 -57548020 + RSINE1 SINE B4 3 159 -6 5 935 668 265 36 21 chr15 45947058 45947251 -57547723 + Lx6 LINE L1 7265 7460 0 5 935 25 0 0 0 chr15 45947293 45947318 -57547656 + AT_rich Low_complexity Low_complexity 1 25 0 5 935 1613 21 5 0 chr15 45947326 45947513 -57547461 + B2_Mm1t SINE B2 1 188 -5 5 935 180 0 0 0 chr15 45947579 45947599 -57547375 + (TAAAAA)n Simple_repeat Simple_repeat 6 25 0 6 935 23 0 0 0 chr15 45947632 45947655 -57547319 + AT_rich Low_complexity Low_complexity 1 23 0 6 935 21 36 0 0 chr15 45947724 45947752 -57547222 + AT_rich Low_complexity Low_complexity 1 28 0 6 935 186 43 0 0 chr15 45947831 45947854 -57547120 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 6 935 1249 210 102 10 chr15 45948174 45948281 -57546693 - RMER1B Other Other -2 1064 956 6 935 477 34 0 0 chr15 45948281 45948340 -57546634 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 935 1249 225 87 10 chr15 45948340 45948564 -57546410 - RMER1B Other Other -111 955 744 6 935 379 238 0 0 chr15 45948609 45948689 -57546285 + URR1B DNA MER1_type 146 225 0 6 935 9490 240 61 24 chr15 45948735 45948843 -57546131 + L1_Mur3 LINE L1 1949 2056 -3824 6 935 333 0 0 0 chr15 45948843 45948880 -57546094 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 935 9490 240 61 24 chr15 45948880 45951378 -57543596 + L1_Mur3 LINE L1 2057 4617 -1263 6 935 444 67 0 0 chr15 45951378 45951438 -57543536 + (TG)n Simple_repeat Simple_repeat 1 60 0 6 935 747 32 0 0 chr15 45951438 45951531 -57543443 + (GA)n Simple_repeat Simple_repeat 1 94 0 6 935 9490 240 61 24 chr15 45951531 45952041 -57542933 + L1_Mur3 LINE L1 4618 5182 -698 6 935 396 0 0 0 chr15 45952060 45952104 -57542870 + (TATG)n Simple_repeat Simple_repeat 4 47 0 6 935 990 290 98 65 chr15 45952113 45952195 -57542779 - RLTR20B3 LTR ERVK -1 576 483 6 935 357 24 0 0 chr15 45952195 45952237 -57542737 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 935 990 290 98 65 chr15 45952237 45952692 -57542282 - RLTR20B3 LTR ERVK -95 482 23 6 935 22 35 0 0 chr15 45952747 45952776 -57542198 + AT_rich Low_complexity Low_complexity 1 29 0 6 935 4572 62 36 2 chr15 45952787 45953396 -57541578 - L1_Mm LINE L1 -818 5065 4436 6 935 647 33 0 0 chr15 45953396 45953486 -57541488 + L1Md_F2 LINE L1 6479 6568 -14 6 935 5044 198 20 1 chr15 45953493 45954542 -57540432 - MYSERV16_I-int LTR ERVK -93 2233 1165 6 935 4502 127 20 3 chr15 45954543 45955391 -57539583 - Lx3A LINE L1 -959 6022 5167 6 935 3881 132 91 7 chr15 45955391 45956070 -57538904 + Lx3A LINE L1 5932 6667 -314 6 935 468 213 0 56 chr15 45956044 45956188 -57538786 + Lx3A LINE L1 6839 6974 -7 6 935 235 217 0 0 chr15 45956206 45956252 -57538722 + GA-rich Low_complexity Low_complexity 2 47 0 6 935 3302 230 5 70 chr15 45956253 45957178 -57537796 - MYSERV16_I-int LTR ERVK -1156 1170 306 6 935 305 252 42 56 chr15 45957178 45957321 -57537653 - RLTR9B LTR ERVK 0 437 297 6 935 1459 211 10 13 chr15 45957544 45957856 -57537118 - MYSERV16_I-int LTR ERVK -2015 311 1 6 935 22 35 0 0 chr15 45958010 45958039 -57536935 + AT_rich Low_complexity Low_complexity 1 29 0 6 935 201 278 0 0 chr15 45958180 45958234 -57536740 + T-rich Low_complexity Low_complexity 1 54 0 6 935 1161 68 7 0 chr15 45958236 45958382 -57536592 - B1_Mus1 SINE Alu -1 147 1 6 935 916 299 85 48 chr15 45959071 45959621 -57535353 - RLTR20B3 LTR ERVK -13 564 19 6 935 510 17 0 0 chr15 45959621 45959680 -57535294 + (TC)n Simple_repeat Simple_repeat 2 60 0 6 935 315 0 0 0 chr15 45959680 45959714 -57535260 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 935 3490 171 123 7 chr15 45959783 45960466 -57534508 - RMER13B LTR ERVK -142 766 5 6 935 218 56 28 0 chr15 45960466 45960502 -57534472 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 935 609 174 19 0 chr15 45960507 45960668 -57534306 + CT-rich Low_complexity Low_complexity 1 164 0 6 935 500 0 17 0 chr15 45960668 45960728 -57534246 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 935 1062 229 125 0 chr15 45960728 45961007 -57533967 + L1_Mur3 LINE L1 5349 5662 -218 6 935 962 71 0 0 chr15 45961680 45961807 -57533167 + B1_Mus1 SINE Alu 10 136 -12 6 935 1085 257 73 95 chr15 45961983 45962478 -57532496 + Lx9 LINE L1 7155 7638 -6 6 935 671 295 54 27 chr15 45962481 45962704 -57532270 + ORR1D1 LTR MaLR 145 373 -1 6 935 802 220 5 11 chr15 45962893 45963081 -57531893 - Lx3C LINE L1 -900 6076 5890 6 935 894 125 17 22 chr15 45963568 45963748 -57531226 + GA-rich Low_complexity Low_complexity 1 179 0 6 935 183 129 0 0 chr15 45963825 45963856 -57531118 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 935 230 299 104 0 chr15 45964963 45965040 -57529934 + LTR84a LTR ERVL 131 215 -542 6 935 627 259 96 25 chr15 45965324 45965522 -57529452 + B3 SINE B2 2 213 -3 6 935 1092 95 0 0 chr15 45966892 45967039 -57527935 - B1_Mus1 SINE Alu -1 147 1 6 935 22 56 0 0 chr15 45967143 45967179 -57527795 + AT_rich Low_complexity Low_complexity 1 36 0 6 935 23 54 0 0 chr15 45967341 45967378 -57527596 + AT_rich Low_complexity Low_complexity 1 37 0 6 935 628 300 106 20 chr15 45967873 45968128 -57526846 - Lx8 LINE L1 -40 7433 7157 6 935 1974 230 55 5 chr15 45968138 45968557 -57526417 + Lx5 LINE L1 6611 7050 0 6 935 245 231 22 11 chr15 45968604 45968696 -57526278 + A-rich Low_complexity Low_complexity 4 96 0 6 935 24678 4 0 0 chr15 45969492 45972282 -57522692 + L1Md_A LINE L1 2797 5586 -297 6 935 8972 5 0 0 chr15 45972282 45973278 -57521696 + L1Md_A LINE L1 5587 6582 0 6 935 1098 82 0 26 chr15 45973537 45973688 -57521286 + B1_Mus1 SINE Alu 1 147 -1 6 935 4824 182 29 21 chr15 45973805 45974808 -57520166 - Lx4B LINE L1 -96 5781 4771 6 935 4329 202 54 40 chr15 45974807 45975935 -57519039 + Lx4B LINE L1 5869 7053 -5 6 935 407 307 83 6 chr15 45976031 45976211 -57518763 - MLT1D LTR MaLR -302 203 10 6 935 368 277 42 51 chr15 45976426 45976544 -57518430 + MTEa LTR MaLR 262 378 -1 6 935 24 85 0 0 chr15 45980400 45980459 -57514515 + AT_rich Low_complexity Low_complexity 1 59 0 6 935 342 0 0 0 chr15 45981680 45981718 -57513256 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 6 935 314 222 28 0 chr15 45981910 45981982 -57512992 - ORR1D2 LTR MaLR -296 74 1 6 935 413 318 75 15 chr15 45982380 45982514 -57512460 + B3A SINE B2 2 143 -55 6 935 23 54 0 0 chr15 45982565 45982602 -57512372 + AT_rich Low_complexity Low_complexity 1 37 0 6 935 24 32 0 0 chr15 45982795 45982826 -57512148 + AT_rich Low_complexity Low_complexity 1 31 0 6 935 1532 246 79 23 chr15 45982826 45983246 -57511728 + Lx6 LINE L1 5483 5897 -1153 6 935 764 96 0 0 chr15 45983246 45983350 -57511624 - U6 snRNA snRNA -3 104 1 6 935 1532 266 100 83 chr15 45983350 45983887 -57511087 + Lx6 LINE L1 5895 6722 -738 6 935 1723 98 19 0 chr15 45983887 45984143 -57510831 + L1_Mus3 LINE L1 6371 6631 -7 6 935 398 274 91 165 chr15 45984143 45984222 -57510752 + Lx6 LINE L1 6723 6755 -705 6 935 1047 88 0 0 chr15 45984222 45984358 -57510616 + B1_Mus1 SINE Alu 1 136 -12 6 935 555 56 0 0 chr15 45984359 45984430 -57510544 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 6 935 398 274 91 165 chr15 45984430 45984565 -57510409 + Lx6 LINE L1 6756 6893 -567 6 935 475 254 98 0 chr15 45984723 45984845 -57510129 - RLTR40 LTR ERVK -13 804 671 6 935 6723 132 17 60 chr15 45984900 45985948 -57509026 - Lx3A LINE L1 -2 6979 5914 6 935 1062 103 17 6 chr15 45985948 45986124 -57508850 + (TTTTC)n Simple_repeat Simple_repeat 3 180 0 6 935 6723 132 17 60 chr15 45986124 45986279 -57508695 - Lx3A LINE L1 -1068 5913 5827 6 935 40639 13 1 6 chr15 45986279 45992483 -57502491 - L1Md_A LINE L1 0 6582 413 6 935 1954 138 13 3 chr15 45992482 45992788 -57502186 - Lx3A LINE L1 -41 5845 5537 6 935 2783 100 52 28 chr15 45992780 45992900 -57502074 + L1_Mur1 LINE L1 5050 5164 -722 6 935 3583 169 216 22 chr15 45992900 45993723 -57501251 + RLTR13C1 LTR ERVK 1 983 0 6 935 2783 100 52 28 chr15 45993723 45994065 -57500909 + L1_Mur1 LINE L1 5165 5523 -363 6 935 1980 234 68 89 chr15 45994065 45994774 -57500200 - RLTR40 LTR ERVK -117 700 7 6 935 27 0 0 0 chr15 45995146 45995173 -57499801 + AT_rich Low_complexity Low_complexity 1 27 0 6 935 277 341 119 35 chr15 45996047 45996190 -57498784 + RSINE1 SINE B4 3 157 -8 6 935 570 331 7 24 chr15 45996475 45996671 -57498303 - B3A SINE B2 -14 202 11 6 935 2797 267 71 5 chr15 45996820 45997565 -57497409 - Lx6 LINE L1 -9 7451 6658 6 935 647 213 17 52 chr15 45997564 45997737 -57497237 - Lx6 LINE L1 -1029 6431 6265 6 935 1277 280 59 33 chr15 45997739 45997804 -57497170 - Lx6 LINE L1 -1304 6156 6094 6 935 198 0 0 0 chr15 45997804 45997826 -57497148 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 935 1277 265 50 48 chr15 45997826 45998343 -57496631 - Lx6 LINE L1 -1367 6093 5566 6 935 668 228 189 23 chr15 45998382 45998717 -57496257 - Lx3C LINE L1 -19 6981 6585 6 935 673 263 0 6 chr15 45998728 45998900 -57496074 - Lx6 LINE L1 -322 5558 5388 6 935 2299 220 20 11 chr15 45998918 45999475 -57495499 - Lx6 LINE L1 -1611 4269 3708 6 935 966 265 0 0 chr15 45999472 45999736 -57495238 - Lx6 LINE L1 -3525 2355 2092 6 935 201 180 0 0 chr15 45999737 45999787 -57495187 + CT-rich Low_complexity Low_complexity 1 50 0 6 935 234 0 0 0 chr15 45999787 45999813 -57495161 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 935 483 87 0 0 chr15 46000556 46000625 -57494349 + (TA)n Simple_repeat Simple_repeat 1 69 0 1 935 2075 242 64 90 chr15 46000661 46001447 -57493527 - RMER1C Other Other -12 1330 566 2 935 498 288 47 0 chr15 46001446 46001637 -57493337 - L1_Mur3 LINE L1 -7481 231 32 3 935 22 56 0 0 chr15 46001637 46001673 -57493301 + AT_rich Low_complexity Low_complexity 1 36 0 4 935 21 100 0 0 chr15 46001819 46001889 -57493085 + AT_rich Low_complexity Low_complexity 1 70 0 5 935 39 0 0 0 chr15 46002065 46002104 -57492870 + AT_rich Low_complexity Low_complexity 1 39 0 6 935 21 57 0 0 chr15 46002264 46002299 -57492675 + AT_rich Low_complexity Low_complexity 1 35 0 7 935 294 29 0 0 chr15 46002938 46002973 -57492001 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 935 3321 230 109 18 chr15 46003527 46004315 -57490659 - RMER13A LTR ERVK 0 860 1 9 935 495 103 126 0 chr15 46004434 46004521 -57490453 - RLTR47_MM LTR ERV1 -434 98 1 1 935 1542 290 21 12 chr15 46005763 46006242 -57488732 - MuRRS4-int LTR ERV1 -1048 4015 3533 1 936 508 293 41 45 chr15 46006598 46006888 -57488086 - MuRRS4-int LTR ERV1 -1946 3117 2929 1 936 224 236 0 0 chr15 46006913 46006968 -57488006 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 936 265 225 0 40 chr15 46006970 46007044 -57487930 + ORR1D2 LTR MaLR 300 370 0 1 936 234 373 57 0 chr15 46007057 46007215 -57487759 + ORR1B1-int LTR MaLR 68 234 -1136 1 936 1908 329 77 45 chr15 46007384 46007814 -57487160 + ORR1B1-int LTR MaLR 232 641 -729 1 936 312 48 0 0 chr15 46007814 46007856 -57487118 + (TAAAA)n Simple_repeat Simple_repeat 3 44 0 1 936 1908 329 77 45 chr15 46007856 46008428 -57486546 + ORR1B1-int LTR MaLR 642 1265 -105 1 936 24 0 0 0 chr15 46009225 46009249 -57485725 + AT_rich Low_complexity Low_complexity 1 24 0 1 936 1278 216 28 10 chr15 46010344 46010634 -57484340 + RodERV21-int LTR ERV1 1673 1967 -3024 1 936 1293 276 9 9 chr15 46010668 46010997 -57483977 + RodERV21-int LTR ERV1 2076 2404 -2587 1 936 2615 244 35 101 chr15 46011002 46012056 -57482918 + RMER17B LTR ERVK 1 860 -48 1 936 1389 212 49 97 chr15 46012184 46012575 -57482399 + ORR1B1 LTR MaLR 15 386 -8 1 936 23 68 0 0 chr15 46012588 46012632 -57482342 + AT_rich Low_complexity Low_complexity 1 44 0 2 936 811 201 37 12 chr15 46013701 46013862 -57481112 + RLTR26 LTR ERVK 478 642 0 2 936 269 143 0 0 chr15 46013866 46013908 -57481066 + ORR1B1 LTR MaLR 347 388 -6 2 936 6598 220 27 102 chr15 46013919 46014779 -57480195 + ORR1B1-int LTR MaLR 6 769 -1194 2 936 1263 94 0 0 chr15 46014779 46014959 -57480015 + (GA)n Simple_repeat Simple_repeat 1 180 0 2 936 6598 220 27 102 chr15 46014959 46016152 -57478822 + ORR1B1-int LTR MaLR 770 1905 -58 2 936 1286 249 21 81 chr15 46016179 46016531 -57478443 + ORR1B1 LTR MaLR 1 343 -51 2 936 1200 41 0 7 chr15 46016531 46016678 -57478296 + B1_Mm SINE Alu 2 147 0 2 936 1286 249 21 81 chr15 46016678 46016744 -57478230 + ORR1B1 LTR MaLR 344 394 0 2 936 29 28 0 0 chr15 46016819 46016855 -57478119 + AT_rich Low_complexity Low_complexity 1 36 0 2 936 6065 141 10 9 chr15 46016855 46018367 -57476607 - L1_Mus4 LINE L1 -88 6548 5031 2 936 28 95 0 0 chr15 46018436 46018520 -57476454 + AT_rich Low_complexity Low_complexity 1 84 0 2 936 2739 166 128 2 chr15 46018766 46019335 -57475639 - Lx3C LINE L1 -2 6974 6334 2 936 1939 178 5 18 chr15 46019337 46019738 -57475236 + L1_Mur1 LINE L1 5126 5521 -365 2 936 21 82 0 0 chr15 46019847 46019896 -57475078 + AT_rich Low_complexity Low_complexity 1 49 0 3 936 21 0 0 0 chr15 46019942 46019963 -57475011 + AT_rich Low_complexity Low_complexity 1 21 0 3 936 252 0 0 0 chr15 46020040 46020068 -57474906 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 936 293 47 23 0 chr15 46020118 46020161 -57474813 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 936 183 122 61 0 chr15 46020302 46020351 -57474623 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 936 29 47 0 0 chr15 46020549 46020592 -57474382 + AT_rich Low_complexity Low_complexity 1 43 0 3 936 36335 29 0 0 chr15 46020652 46026803 -57468171 - L1Md_T LINE L1 0 6585 338 3 936 21 57 0 0 chr15 46027941 46027976 -57466998 + AT_rich Low_complexity Low_complexity 1 35 0 3 936 1028 121 0 0 chr15 46028191 46028331 -57466643 + B1_Mus1 SINE Alu 3 142 -6 3 936 273 89 0 0 chr15 46028332 46028377 -57466597 + (CCAA)n Simple_repeat Simple_repeat 4 48 0 3 936 586 240 147 5 chr15 46028415 46028612 -57466362 + URR1A DNA MER1_type 1 225 -1 4 936 367 229 154 21 chr15 46028784 46028927 -57466047 + HAL1-3A_ME LINE L1 2277 2438 -420 4 936 477 0 0 0 chr15 46029069 46029122 -57465852 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 936 783 154 0 44 chr15 46029126 46029262 -57465712 + B1_Mur4 SINE Alu 12 141 -9 4 936 249 258 242 0 chr15 46029346 46029474 -57465500 + Lx8 LINE L1 6315 6473 -1000 4 936 397 327 27 0 chr15 46029817 46029967 -57465007 - Lx9 LINE L1 -1133 6511 6358 4 936 198 0 0 0 chr15 46029981 46030003 -57464971 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 936 453 36 0 0 chr15 46030003 46030057 -57464917 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 936 339 306 81 53 chr15 46030243 46030564 -57464410 - Lx9 LINE L1 -1553 6091 5762 4 936 10400 21 6 0 chr15 46031288 46033215 -57461759 - L1Md_A LINE L1 -1 6581 4638 4 936 570 29 0 0 chr15 46034566 46034634 -57460340 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 936 276 237 125 7 chr15 46034647 46034783 -57460191 + Lx7 LINE L1 7471 7622 -74 5 936 386 0 41 0 chr15 46034848 46034897 -57460077 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 5 936 1068 81 15 0 chr15 46034897 46035033 -57459941 - B1_Mm SINE Alu -9 138 1 5 936 23 0 0 0 chr15 46035035 46035058 -57459916 + AT_rich Low_complexity Low_complexity 1 23 0 5 936 337 326 68 0 chr15 46035442 46035589 -57459385 + RSINE1 SINE B4 3 159 -6 5 936 303 71 0 0 chr15 46035597 46035639 -57459335 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 936 26 50 0 0 chr15 46035708 46035748 -57459226 + AT_rich Low_complexity Low_complexity 1 40 0 5 936 37304 11 2 0 chr15 46035996 46041196 -57453778 - L1Md_A LINE L1 -2 6580 1373 5 936 10589 12 7 1 chr15 46041196 46042631 -57452343 + L1Md_A LINE L1 37 1481 -4402 5 936 24076 7 0 1 chr15 46042608 46045481 -57449493 + L1Md_A LINE L1 2715 5586 -297 5 936 8990 6 0 0 chr15 46045481 46046477 -57448497 + L1Md_A LINE L1 5587 6582 0 5 936 8733 24 4 31 chr15 46046482 46047689 -57447285 - L1Md_A LINE L1 -4500 1383 214 5 936 823 241 138 47 chr15 46047824 46048483 -57446491 - RMER6A LTR ERVK -38 718 98 5 936 473 164 192 33 chr15 46048971 46049091 -57445883 - RMER6A LTR ERVK -551 139 1 5 936 481 308 55 48 chr15 46049091 46049384 -57445590 + Lx9 LINE L1 6859 7153 -491 5 936 232 217 0 16 chr15 46049589 46049650 -57445324 + Lx9 LINE L1 7382 7441 -203 5 936 865 257 147 28 chr15 46049893 46050253 -57444721 + Lx7 LINE L1 6746 7148 -548 6 936 2176 161 31 20 chr15 46050253 46050645 -57444329 + RLTR26 LTR ERVK 1 396 -246 6 936 437 337 45 61 chr15 46050711 46050949 -57444025 + L1MC1 LINE L1 5925 6162 -171 6 936 3137 46 5 22 chr15 46050949 46051352 -57443622 - MTA_Mm LTR MaLR 0 396 1 6 936 437 337 45 61 chr15 46051352 46051423 -57443551 + L1MC1 LINE L1 6163 6229 -104 6 936 402 39 0 0 chr15 46051440 46051492 -57443482 + (TTG)n Simple_repeat Simple_repeat 2 53 0 6 936 557 232 59 81 chr15 46051716 46052018 -57442956 + RMER16 LTR ERVK 1 379 -154 6 936 947 70 14 0 chr15 46052019 46052162 -57442812 - MusHAL1 LINE L1 -1171 1541 1397 6 936 1103 75 0 0 chr15 46052161 46052321 -57442653 - L1Md_F2 LINE L1 -12 6570 6411 6 936 7408 129 35 0 chr15 46052310 46054116 -57440858 - L1Md_F LINE L1 -3289 2594 726 6 936 398 274 37 0 chr15 46054125 46054260 -57440714 - L1Md_F LINE L1 -5813 803 664 6 936 23 78 0 0 chr15 46054262 46054313 -57440661 + AT_rich Low_complexity Low_complexity 1 51 0 6 936 3085 129 34 27 chr15 46055644 46056169 -57438805 + Lx3_Mus LINE L1 6479 7007 -2 7 936 21 0 0 0 chr15 46056170 46056191 -57438783 + AT_rich Low_complexity Low_complexity 1 21 0 7 936 478 311 44 72 chr15 46056309 46056583 -57438391 - ORR1D1 LTR MaLR -96 274 5 7 936 22 56 0 0 chr15 46056611 46056647 -57438327 + AT_rich Low_complexity Low_complexity 1 36 0 7 936 23 0 0 0 chr15 46056838 46056861 -57438113 + AT_rich Low_complexity Low_complexity 1 23 0 7 936 1132 331 22 12 chr15 46056866 46057279 -57437695 - Lx6 LINE L1 -37 7423 7007 7 936 693 241 87 25 chr15 46057281 46057518 -57437456 - RLTR13D5 LTR ERVK 0 1023 653 7 936 539 324 42 28 chr15 46057487 46057703 -57437271 + MTE2a LTR MaLR 156 374 -5 7 936 300 324 29 0 chr15 46059089 46059194 -57435780 - Lx9 LINE L1 -451 7193 7086 7 936 1858 237 57 57 chr15 46059194 46059718 -57435256 - RMER6D LTR ERVK -25 695 172 7 936 2379 199 130 28 chr15 46060039 46060390 -57434584 - L1_Mur2 LINE L1 -901 4976 4576 8 936 213 65 0 0 chr15 46060390 46060421 -57434553 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 936 2379 199 130 28 chr15 46060421 46060462 -57434512 - L1_Mur2 LINE L1 -1302 4575 4533 8 936 504 0 0 0 chr15 46060462 46060518 -57434456 + (TA)n Simple_repeat Simple_repeat 2 57 0 8 936 2379 199 130 28 chr15 46060518 46060869 -57434105 - L1_Mur2 LINE L1 -1345 4532 4157 8 936 2534 242 166 16 chr15 46060888 46061649 -57433325 + Lx5 LINE L1 6173 7047 -3 8 936 260 272 98 44 chr15 46062841 46063045 -57431929 - L1M4 LINE L1 -1667 4479 4259 8 936 891 266 19 38 chr15 46063123 46063385 -57431589 - Lx6 LINE L1 -665 6795 6539 8 936 2369 105 32 5 chr15 46063472 46063845 -57431129 + L1_Mus4 LINE L1 6254 6636 0 8 936 4164 183 45 9 chr15 46063854 46064145 -57430829 - L1_Mur2 LINE L1 -1031 4846 4560 8 936 4106 33 2 0 chr15 46064145 46064633 -57430341 - L1Md_T LINE L1 0 6582 6094 8 936 4164 183 45 9 chr15 46064633 46065208 -57429766 - L1_Mur2 LINE L1 -1318 4559 3949 8 936 418 336 36 8 chr15 46066172 46066429 -57428545 + L1_Mur3 LINE L1 2030 2298 -3582 8 936 1389 245 10 0 chr15 46066459 46066765 -57428209 - Lx5 LINE L1 0 7050 6742 9 936 381 294 186 4 chr15 46066783 46067036 -57427938 + L1_Rod LINE L1 2337 2635 -3212 9 936 34 0 0 0 chr15 46067442 46067476 -57427498 + AT_rich Low_complexity Low_complexity 1 34 0 9 936 34 65 0 0 chr15 46068480 46068542 -57426432 + AT_rich Low_complexity Low_complexity 1 62 0 9 936 300 243 245 20 chr15 46069066 46069217 -57425757 - B3A SINE B2 -13 185 1 9 936 1796 43 0 17 chr15 46069264 46069498 -57425476 - L1Md_F2 LINE L1 0 6582 6353 9 936 242 240 51 39 chr15 46069534 46069612 -57425362 - MTEa LTR MaLR -22 357 279 9 936 4741 195 43 15 chr15 46069782 46070777 -57424197 - Lx2B LINE L1 -4 6996 5974 9 936 3149 161 9 21 chr15 46070777 46071477 -57423497 + Lx2A1 LINE L1 5268 5963 -1045 9 936 23 33 0 0 chr15 46071728 46071758 -57423216 + AT_rich Low_complexity Low_complexity 1 30 0 9 936 22 35 0 0 chr15 46072756 46072785 -57422189 + AT_rich Low_complexity Low_complexity 1 29 0 1 936 27 0 0 0 chr15 46073337 46073364 -57421610 + AT_rich Low_complexity Low_complexity 1 27 0 1 936 281 314 6 22 chr15 46073484 46073663 -57421311 + L1MD LINE L1 4528 4703 -1443 1 936 231 130 18 36 chr15 46073845 46073901 -57421073 + (TTATA)n Simple_repeat Simple_repeat 5 59 0 1 936 331 232 55 49 chr15 46073903 46074066 -57420908 + Lx9 LINE L1 7481 7644 0 1 936 979 280 26 11 chr15 46074302 46074566 -57420408 - Lx9 LINE L1 -617 7027 6760 1 936 432 0 0 0 chr15 46074580 46074628 -57420346 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 936 2829 96 0 0 chr15 46074799 46075186 -57419788 - L1_Mus2 LINE L1 0 6566 6180 1 936 295 333 26 0 chr15 46075423 46075576 -57419398 + L1MB7 LINE L1 6012 6168 -16 1 936 3392 186 55 12 chr15 46075814 46076503 -57418471 - RMER6D LTR ERVK -1 719 1 1 936 1039 136 165 28 chr15 46076610 46076877 -57418097 + Lx3B LINE L1 6610 6912 -61 1 936 1573 163 0 0 chr15 46077473 46077725 -57417249 + ORR1A2 LTR MaLR 1 252 -75 1 936 3677 171 19 3 chr15 46077720 46078358 -57416616 + ORR1A2-int LTR MaLR 1316 1963 0 1 936 1797 120 57 22 chr15 46078358 46078674 -57416300 + ORR1A2 LTR MaLR 1 327 0 1 936 234 225 23 70 chr15 46078770 46078856 -57416118 + Lx7 LINE L1 7613 7694 -2 1 936 183 100 0 0 chr15 46080374 46080404 -57414570 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 1 936 1460 224 28 72 chr15 46081076 46081533 -57413441 + RMER6C LTR ERVK 1 437 -253 1 936 491 45 15 0 chr15 46081534 46081600 -57413374 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 1 936 1187 210 16 4 chr15 46081601 46081850 -57413124 + RMER6C LTR ERVK 391 642 -48 1 936 930 295 4 17 chr15 46081857 46082098 -57412876 - Lx5 LINE L1 -211 6839 6602 1 936 1935 201 35 10 chr15 46082131 46082533 -57412441 - Lx5 LINE L1 -953 6097 5686 1 936 249 118 19 56 chr15 46082507 46082561 -57412413 + L1_Mur1 LINE L1 4539 4590 -1293 1 936 753 284 9 9 chr15 46082984 46083197 -57411777 + B3 SINE B2 2 214 -2 1 936 250 293 67 57 chr15 46083588 46083693 -57411281 + PB1D9 SINE Alu 14 119 -1 1 936 24 32 0 0 chr15 46083902 46083933 -57411041 + AT_rich Low_complexity Low_complexity 1 31 0 1 936 1262 88 10 10 chr15 46084831 46085026 -57409948 - L1_Mus3 LINE L1 -4 6634 6440 1 936 316 344 82 13 chr15 46085577 46085736 -57409238 - MER70A LTR ERVL 0 472 303 1 936 6810 57 0 16 chr15 46086764 46087463 -57407511 + L1Md_F2 LINE L1 5695 6391 -191 1 936 3425 20 2 0 chr15 46087463 46087858 -57407116 + MTA_Mm LTR MaLR 1 396 0 1 936 9276 25 2 1 chr15 46087858 46088953 -57406021 + MTA_Mm-int LTR MaLR 1 1096 -2 1 936 3215 21 39 0 chr15 46088955 46089336 -57405638 + MTA_Mm LTR MaLR 1 396 0 1 936 6810 57 0 16 chr15 46089336 46089520 -57405454 + L1Md_F2 LINE L1 6392 6567 -15 1 936 195 184 0 0 chr15 46089930 46089968 -57405006 + (TAG)n Simple_repeat Simple_repeat 1 38 0 1 936 385 322 28 0 chr15 46089974 46090117 -57404857 + B1_Mur1 SINE Alu 3 149 0 1 936 242 298 99 6 chr15 46090242 46090369 -57404605 + MIR SINE MIR 72 210 -58 1 936 255 291 11 85 chr15 46090731 46090825 -57404149 + RSINE1 SINE B4 78 164 -1 1 936 189 152 0 29 chr15 46091003 46091037 -57403937 - L2 LINE L2 -1786 1633 1601 1 936 1405 106 19 9 chr15 46092858 46093068 -57401906 - MTB_Mm LTR MaLR -15 392 181 1 936 1640 47 0 14 chr15 46093155 46093373 -57401601 - L1Md_F2 LINE L1 -12 6570 6356 1 936 1171 55 6 52 chr15 46093373 46093547 -57401427 - MTB_Mm LTR MaLR -241 166 1 1 936 732 156 45 50 chr15 46093547 46093726 -57401248 - MTB_Mm-int LTR MaLR -42 1216 978 1 936 221 0 0 33 chr15 46094004 46094034 -57400940 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1 936 4466 159 63 77 chr15 46094035 46095015 -57399959 - MTB_Mm-int LTR MaLR -131 967 1 1 936 710 144 0 0 chr15 46095017 46095128 -57399846 - MTB_Mm LTR MaLR -2 405 295 1 936 225 180 32 32 chr15 46095129 46095192 -57399782 + RLTR22_Mus LTR ERVK 290 352 -1456 1 936 215 212 31 74 chr15 46096159 46096322 -57398652 + (TATAA)n Simple_repeat Simple_repeat 4 159 0 1 936 442 352 56 16 chr15 46096371 46096674 -57398300 - Lx9 LINE L1 -215 7429 7115 1 936 25 0 0 0 chr15 46096985 46097010 -57397964 + AT_rich Low_complexity Low_complexity 1 25 0 1 936 29 70 0 0 chr15 46097103 46097160 -57397814 + AT_rich Low_complexity Low_complexity 1 57 0 1 936 21 0 0 0 chr15 46097868 46097889 -57397085 + AT_rich Low_complexity Low_complexity 1 21 0 1 936 1531 288 30 13 chr15 46097894 46098378 -57396596 - Lx6 LINE L1 -150 7546 6796 1 936 270 0 0 0 chr15 46099247 46099277 -57395697 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 936 409 341 87 29 chr15 46099905 46100113 -57394861 + B4A SINE B4 1 220 -72 1 936 5592 148 53 8 chr15 46100133 46101082 -57393892 + Lx2 LINE L1 5980 6970 -27 1 936 505 101 0 20 chr15 46101080 46101181 -57393793 + Lx3_Mus LINE L1 6911 7009 0 1 936 24 67 0 0 chr15 46101371 46101416 -57393558 + AT_rich Low_complexity Low_complexity 1 45 0 1 936 25 0 0 0 chr15 46102135 46102160 -57392814 + AT_rich Low_complexity Low_complexity 1 25 0 1 936 929 139 0 37 chr15 46102160 46102347 -57392627 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 936 1020 293 105 19 chr15 46102929 46103291 -57391683 - MTD LTR MaLR -14 405 13 1 936 292 327 58 7 chr15 46103404 46103558 -57391416 - Lx8 LINE L1 -653 6820 6659 1 936 1197 301 34 3 chr15 46103575 46103931 -57391043 - ORR1D1 LTR MaLR -5 369 3 1 936 276 30 0 0 chr15 46103993 46104026 -57390948 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1 936 515 322 24 9 chr15 46104061 46104271 -57390703 - Lx8 LINE L1 -1055 6418 6206 1 936 573 118 47 0 chr15 46104268 46104353 -57390621 - Lx LINE L1 -157 6497 6409 1 936 196 145 43 0 chr15 46104632 46104701 -57390273 + T-rich Low_complexity Low_complexity 4 75 0 1 936 1119 76 0 0 chr15 46104702 46104846 -57390128 - B1_Mus1 SINE Alu -1 147 4 1 936 2431 317 42 55 chr15 46105073 46106144 -57388830 + MTD-int LTR MaLR 3 1059 -199 1 936 1079 298 32 9 chr15 46106151 46106466 -57388508 + ORR1D1 LTR MaLR 1 322 -52 1 936 318 339 45 61 chr15 46106508 46106706 -57388268 - B3 SINE B2 -5 211 17 1 936 402 272 59 37 chr15 46106703 46106890 -57388084 + MTD-int LTR MaLR 1068 1258 0 1 936 940 284 100 34 chr15 46106890 46107269 -57387705 + MTD LTR MaLR 1 404 -15 1 936 291 204 31 51 chr15 46107277 46107375 -57387599 + (CATA)n Simple_repeat Simple_repeat 1 96 0 1 936 286 283 106 0 chr15 46107575 46107688 -57387286 + L1MC1 LINE L1 6044 6168 -165 1 936 1066 82 0 0 chr15 46108004 46108151 -57386823 + B1_Mus2 SINE Alu 1 147 0 1 936 25 31 0 0 chr15 46108436 46108468 -57386506 + AT_rich Low_complexity Low_complexity 1 32 0 1 936 203 244 0 0 chr15 46108491 46108536 -57386438 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 936 909 93 47 0 chr15 46109212 46109341 -57385633 - B1_Mus1 SINE Alu -11 137 3 1 936 1098 69 7 0 chr15 46110397 46110542 -57384432 - B1_Mus1 SINE Alu 0 148 3 1 936 334 281 34 0 chr15 46111239 46111328 -57383646 - MLT2B3 LTR ERVL -457 97 6 1 936 279 330 102 49 chr15 46111335 46111561 -57383413 - MTE-int LTR MaLR -2 1578 1341 1 936 320 0 0 44 chr15 46111572 46111617 -57383357 - L1_Mus3 LINE L1 -815 5823 5781 1 936 3353 115 73 7 chr15 46111619 46112181 -57382793 - Lx3_Mus LINE L1 -8 7001 6403 1 936 560 101 0 57 chr15 46112177 46112282 -57382692 + Lx LINE L1 6542 6640 -14 1 936 237 220 33 33 chr15 46112292 46112319 -57382655 - Lx7 LINE L1 -729 6967 6939 1 936 198 0 0 0 chr15 46112319 46112341 -57382633 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1 936 237 220 33 33 chr15 46112341 46112374 -57382600 - Lx7 LINE L1 -758 6938 6907 1 936 658 373 51 56 chr15 46112574 46113006 -57381968 - MTE-int LTR MaLR -216 1364 935 1 936 232 250 25 12 chr15 46113322 46113403 -57381571 + L1_Mur1 LINE L1 229 310 -6672 1 936 611 380 54 44 chr15 46113499 46113978 -57380996 - MTE-int LTR MaLR -1068 512 29 1 936 4649 61 11 2 chr15 46114729 46115339 -57379635 - L1Md_F2 LINE L1 -14 6568 5953 1 936 22 56 0 0 chr15 46118704 46118740 -57376234 + AT_rich Low_complexity Low_complexity 1 36 0 1 936 26 30 0 0 chr15 46118784 46118817 -57376157 + AT_rich Low_complexity Low_complexity 1 33 0 1 936 426 139 0 0 chr15 46120401 46120473 -57374501 + (CA)n Simple_repeat Simple_repeat 2 73 0 1 936 7236 69 33 2 chr15 46123071 46124088 -57370886 - L1_Mus2 LINE L1 0 6566 5519 1 936 859 116 0 14 chr15 46124265 46124405 -57370569 - L1Md_F2 LINE L1 -12 6570 6433 1 936 4255 70 0 4 chr15 46124405 46124952 -57370022 + L1Md_F2 LINE L1 5927 6471 -111 1 936 5713 35 0 0 chr15 46124972 46125652 -57369322 - L1Md_T LINE L1 0 6582 5903 1 936 296 352 10 25 chr15 46125679 46125883 -57369091 + ERVL-B4-int LTR ERVL 30 230 -5484 1 936 425 311 59 29 chr15 46126595 46126788 -57368186 + B3 SINE B2 18 213 -3 1 936 2961 125 71 12 chr15 46126804 46126856 -57368118 - Lx3_Mus LINE L1 -899 6110 6034 1 936 216 0 0 0 chr15 46126856 46126880 -57368094 + (TCCC)n Simple_repeat Simple_repeat 1 24 0 1 936 9665 119 63 43 chr15 46126880 46128761 -57366213 - Lx3_Mus LINE L1 -976 6033 4131 1 936 1284 103 0 0 chr15 46128761 46128946 -57366028 + Lx3_Mus LINE L1 3944 4128 -1758 1 936 4703 84 0 6 chr15 46129429 46130064 -57364910 + L1_Mus1 LINE L1 5933 6563 -4 1 936 384 312 148 36 chr15 46130077 46130496 -57364478 + ERVL-B4-int LTR ERVL 2572 3037 -2677 1 936 419 312 111 16 chr15 46131001 46131379 -57363595 - L1MB4 LINE L1 -6173 434 21 1 936 24 0 0 0 chr15 46131436 46131460 -57363514 + AT_rich Low_complexity Low_complexity 1 24 0 1 936 300 53 0 0 chr15 46131747 46131785 -57363189 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 1 936 713 228 0 45 chr15 46131793 46131949 -57363025 - B2_Mm2 SINE B2 -46 149 1 1 936 336 64 0 0 chr15 46132017 46132064 -57362910 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 1 936 360 0 0 0 chr15 46132065 46132105 -57362869 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 936 431 384 25 6 chr15 46132118 46132278 -57362696 - B3A SINE B2 -34 164 2 1 936 974 249 48 73 chr15 46132504 46132820 -57362154 - Lx4A LINE L1 -9 7049 6742 1 936 25 65 0 0 chr15 46132822 46132868 -57362106 + AT_rich Low_complexity Low_complexity 1 46 0 1 936 23 54 0 0 chr15 46132960 46132997 -57361977 + AT_rich Low_complexity Low_complexity 1 37 0 1 936 635 328 84 25 chr15 46133112 46133553 -57361421 - Lx7 LINE L1 -376 7320 6854 1 936 22 56 0 0 chr15 46133643 46133679 -57361295 + AT_rich Low_complexity Low_complexity 1 36 0 1 936 189 254 119 0 chr15 46133738 46133797 -57361177 + L4 LINE RTE 872 937 -1092 1 936 24 77 0 0 chr15 46134359 46134411 -57360563 + AT_rich Low_complexity Low_complexity 1 52 0 1 936 31 58 0 0 chr15 46134497 46134549 -57360425 + AT_rich Low_complexity Low_complexity 1 52 0 1 936 4043 186 80 56 chr15 46134704 46135451 -57359523 + L1VL2 LINE L1 371 1087 -5547 1 936 2031 40 4 0 chr15 46135451 46135702 -57359272 + L1Md_F3 LINE L1 6319 6570 -14 2 936 4043 188 129 17 chr15 46135702 46136511 -57358463 + L1VL2 LINE L1 1088 2056 -3830 1 936 3746 125 19 0 chr15 46136529 46137104 -57357870 + L1_Mus3 LINE L1 5588 6173 -465 2 936 345 264 67 55 chr15 46137105 46137269 -57357705 - RNLTR23 LTR ERVK -1 641 476 2 937 2655 281 17 10 chr15 46137938 46138141 -57356833 - RNERVK23-int LTR ERVK -403 7814 7612 2 937 375 23 0 0 chr15 46138141 46138185 -57356789 + (TCC)n Simple_repeat Simple_repeat 3 46 0 2 937 2655 281 17 10 chr15 46138185 46138758 -57356216 - RNERVK23-int LTR ERVK -606 7611 7034 2 937 553 328 0 0 chr15 46138765 46138936 -57356038 - RNERVK23-int LTR ERVK -3876 4341 4171 2 937 1969 294 17 26 chr15 46138972 46139667 -57355307 - RNERVK23-int LTR ERVK -6231 1986 1298 2 937 1032 260 51 14 chr15 46139803 46140099 -57354875 - RNERVK23-int LTR ERVK -7728 489 183 2 937 350 274 17 73 chr15 46140308 46140485 -57354489 - RNLTR23 LTR ERVK -2 640 474 2 937 2926 104 68 0 chr15 46140739 46141181 -57353793 + L1_Mus3 LINE L1 6167 6638 0 2 937 301 335 123 18 chr15 46141307 46141477 -57353497 - L1MC4a LINE L1 -6 7876 7689 2 937 223 280 42 0 chr15 46142017 46142135 -57352839 + (CATATA)n Simple_repeat Simple_repeat 2 124 0 2 937 336 237 11 38 chr15 46142081 46142265 -57352709 + (TA)n Simple_repeat Simple_repeat 1 179 0 2 937 367 286 121 21 chr15 46142797 46143106 -57351868 + L1MA4A LINE L1 5588 5927 -376 2 937 17664 68 2 6 chr15 46144008 46147059 -57347915 - L1Md_F2 LINE L1 -2 6580 3539 2 937 13160 201 34 101 chr15 46147056 46148945 -57346029 + L1Md_A LINE L1 1002 2693 -3190 2 937 249 222 0 0 chr15 46148945 46148999 -57345975 + RMER6A LTR ERVK 703 756 0 2 937 13160 201 34 101 chr15 46148999 46150439 -57344535 + L1Md_A LINE L1 2694 3985 -1898 2 937 3040 204 44 2 chr15 46150439 46151077 -57343897 - Lx4A LINE L1 -1 7057 6393 2 937 13160 212 39 105 chr15 46151077 46152627 -57342347 + L1Md_A LINE L1 3986 5598 -285 2 937 279 380 25 8 chr15 46152702 46152824 -57342150 - B4A SINE B4 -151 141 18 2 937 24 32 0 0 chr15 46152995 46153026 -57341948 + AT_rich Low_complexity Low_complexity 1 31 0 2 937 22 0 0 0 chr15 46153368 46153390 -57341584 + AT_rich Low_complexity Low_complexity 1 22 0 2 937 23 0 0 0 chr15 46153862 46153885 -57341089 + AT_rich Low_complexity Low_complexity 1 23 0 2 937 282 29 0 0 chr15 46154480 46154515 -57340459 + (T)n Simple_repeat Simple_repeat 1 35 0 2 937 1035 116 0 0 chr15 46154515 46154662 -57340312 - B1_Mm SINE Alu 0 147 1 2 937 1215 328 66 49 chr15 46154913 46155986 -57338988 + MuLV-int LTR ERV1 2350 3440 -4166 2 937 527 311 23 19 chr15 46155990 46156206 -57338768 + MuLV-int LTR ERV1 3615 3831 -3770 2 937 1871 321 21 24 chr15 46156595 46157384 -57337590 + MuRRS4-int LTR ERV1 3530 4316 -747 2 937 4212 25 0 0 chr15 46157607 46158089 -57336885 - LTRIS_Mm LTR ERV1 0 482 1 2 937 1760 317 54 49 chr15 46158121 46159848 -57335126 + MMERGLN-int LTR ERV1 5730 7717 -61 2 937 337 351 87 38 chr15 46160152 46160439 -57334535 + RLTR41 LTR ERV1 146 446 0 2 937 229 179 89 0 chr15 46160569 46160625 -57334349 - Lx9 LINE L1 -691 6953 6893 2 937 25 51 0 0 chr15 46161642 46161681 -57333293 + AT_rich Low_complexity Low_complexity 1 39 0 2 937 252 0 0 0 chr15 46161862 46161890 -57333084 + (TATAA)n Simple_repeat Simple_repeat 2 29 0 2 937 35 24 0 0 chr15 46161911 46161953 -57333021 + AT_rich Low_complexity Low_complexity 1 42 0 2 937 743 347 117 16 chr15 46162635 46163095 -57331879 - Lx8 LINE L1 -223 7250 6765 2 937 284 19 56 19 chr15 46163095 46163149 -57331825 + (CAA)n Simple_repeat Simple_repeat 2 57 0 2 937 743 347 117 16 chr15 46163149 46163253 -57331721 - Lx8 LINE L1 -709 6764 6630 2 937 1419 233 77 15 chr15 46163775 46164242 -57330732 - Lx7 LINE L1 -1 7695 7200 2 937 242 327 27 63 chr15 46164511 46164622 -57330352 + MLT1C LTR MaLR 71 177 -290 2 937 23 0 0 0 chr15 46164768 46164791 -57330183 + AT_rich Low_complexity Low_complexity 1 23 0 2 937 3221 195 119 56 chr15 46165179 46166085 -57328889 + Lx3C LINE L1 6006 6968 -8 2 937 876 156 6 16 chr15 46166449 46166631 -57328343 + GA-rich Low_complexity Low_complexity 1 180 0 2 937 899 140 0 6 chr15 46166586 46166744 -57328230 + (GGAA)n Simple_repeat Simple_repeat 4 160 0 2 937 279 0 0 0 chr15 46166979 46167010 -57327964 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 2 937 257 246 14 14 chr15 46167201 46167275 -57327699 + GA-rich Low_complexity Low_complexity 6 79 0 2 937 305 304 27 11 chr15 46167414 46167517 -57327457 + MIRb SINE MIR 54 165 -103 2 937 21 0 0 0 chr15 46168081 46168102 -57326872 + AT_rich Low_complexity Low_complexity 1 21 0 2 937 36 53 0 0 chr15 46168449 46168506 -57326468 + AT_rich Low_complexity Low_complexity 1 57 0 2 937 4669 85 34 11 chr15 46169133 46169802 -57325172 - L1Md_F2 LINE L1 -2 6580 5896 2 937 225 244 0 0 chr15 46170380 46170421 -57324553 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 937 354 174 14 14 chr15 46171207 46171277 -57323697 - Lx3A LINE L1 -946 6035 5966 2 937 4811 119 27 10 chr15 46171273 46171581 -57323393 - L1_Mur1 LINE L1 -907 4979 4653 2 937 621 27 0 0 chr15 46171581 46171656 -57323318 + (TTTC)n Simple_repeat Simple_repeat 3 77 0 2 937 4811 119 27 10 chr15 46171656 46172130 -57322844 - L1_Mur1 LINE L1 -1234 4652 4184 2 937 7772 124 42 78 chr15 46172121 46173655 -57321319 + L1_Mur1 LINE L1 2697 4176 -1710 2 937 1989 182 6 0 chr15 46173647 46174004 -57320970 - Lx3A LINE L1 -84 5802 5444 2 937 2963 77 20 49 chr15 46174006 46174456 -57320518 - L1_Mus2 LINE L1 0 6566 6130 2 937 1243 37 6 0 chr15 46174443 46174604 -57320370 + L1Md_A LINE L1 6421 6582 0 2 937 13613 100 14 10 chr15 46174610 46175632 -57319342 - L1_Mus2 LINE L1 -415 6151 5131 2 937 2343 69 0 7 chr15 46175632 46175939 -57319035 - L1Md_F2 LINE L1 -17 6565 6261 2 937 13613 136 19 19 chr15 46175939 46177507 -57317467 - L1_Mus2 LINE L1 -753 5130 3560 2 937 6809 129 5 43 chr15 46177496 46178909 -57316065 - L1_Mus2 LINE L1 -3612 2271 951 2 937 981 110 14 0 chr15 46178909 46179054 -57315920 - B1_Mm SINE Alu 0 147 1 2 937 2502 194 54 62 chr15 46179054 46179396 -57315578 - L1_Mus2 LINE L1 -5660 956 584 2 937 1744 185 25 3 chr15 46179395 46179759 -57315215 - L1_Mur1 LINE L1 -406 5480 5109 2 937 360 0 0 0 chr15 46180116 46180156 -57314818 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 937 897 182 5 11 chr15 46180288 46180497 -57314477 - L1_Mm LINE L1 -1448 2466 2294 2 937 1239 98 4 105 chr15 46180497 46180726 -57314248 + L1Md_F2 LINE L1 5380 5585 -298 2 937 7450 68 21 1 chr15 46180727 46181692 -57313282 + L1Md_F2 LINE L1 5587 6570 -12 2 937 1551 162 28 19 chr15 46181694 46182014 -57312960 - MusHAL1 LINE L1 -1606 1106 784 2 937 12655 156 51 26 chr15 46181984 46182233 -57312741 - L1_Mur1 LINE L1 -1939 3947 3701 2 937 612 40 0 0 chr15 46182233 46182308 -57312666 + (TA)n Simple_repeat Simple_repeat 1 75 0 2 937 315 0 0 0 chr15 46182308 46182342 -57312632 + (GA)n Simple_repeat Simple_repeat 2 36 0 2 937 12655 156 51 26 chr15 46182342 46183259 -57311715 - L1_Mur1 LINE L1 -2186 3700 2799 2 937 258 32 0 0 chr15 46183259 46183290 -57311684 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 937 12655 156 51 26 chr15 46183290 46184586 -57310388 - L1_Mur1 LINE L1 -3088 2798 1443 2 937 2603 19 31 3 chr15 46184586 46184908 -57310066 - L1Md_F3 LINE L1 0 6584 6254 2 937 12655 221 68 39 chr15 46184908 46186034 -57308940 - L1_Mur1 LINE L1 -4444 1442 17 2 937 1269 274 81 34 chr15 46186887 46187252 -57307722 - Lx9 LINE L1 -1679 5965 5556 2 937 3485 18 2 0 chr15 46187252 46187647 -57307327 - MTA_Mm LTR MaLR 0 396 1 2 937 9278 25 3 1 chr15 46187647 46188743 -57306231 - MTA_Mm-int LTR MaLR 0 1098 1 2 937 3485 18 2 0 chr15 46188743 46189138 -57305836 - MTA_Mm LTR MaLR 0 396 1 2 937 1269 284 68 62 chr15 46189138 46189302 -57305672 - Lx9 LINE L1 -292 5555 5402 2 937 5569 58 21 0 chr15 46189302 46190007 -57304967 - L1Md_F2 LINE L1 -12 6570 5851 2 937 1269 284 68 62 chr15 46190007 46190365 -57304609 - Lx9 LINE L1 -446 5401 5041 2 937 378 0 0 0 chr15 46190417 46190459 -57304515 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 937 351 0 0 0 chr15 46190459 46190497 -57304477 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 937 21 0 0 0 chr15 46190499 46190520 -57304454 + AT_rich Low_complexity Low_complexity 1 21 0 2 937 481 326 0 16 chr15 46190575 46190759 -57304215 - Lx9 LINE L1 -264 7380 7200 2 937 207 0 0 0 chr15 46190998 46191021 -57303953 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 2 937 1116 77 0 7 chr15 46191021 46191156 -57303818 - B1_Mus1 SINE Alu -13 135 1 2 937 357 24 0 0 chr15 46191202 46191244 -57303730 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 937 6981 117 11 13 chr15 46191578 46191817 -57303157 - Lx LINE L1 0 6654 6420 2 937 5414 147 43 13 chr15 46191817 46192747 -57302227 - RMER17B LTR ERVK 0 958 1 2 937 6981 132 19 10 chr15 46192747 46193859 -57301115 - Lx LINE L1 -235 6419 5287 2 937 5732 128 23 13 chr15 46193870 46194853 -57300121 - Lx3_Mus LINE L1 -11 6998 6006 2 937 885 200 0 26 chr15 46194853 46195043 -57299931 - L1_Mur2 LINE L1 -878 4999 4815 2 937 35516 42 0 3 chr15 46195046 46200268 -57294706 + L1Md_T LINE L1 285 5589 -297 2 937 8320 33 0 2 chr15 46200268 46201254 -57293720 + L1Md_T LINE L1 5590 6573 -12 2 937 599 162 0 3 chr15 46201276 46201382 -57293592 - L1_Mur2 LINE L1 -1053 4830 4724 2 937 775 201 58 11 chr15 46201681 46201872 -57293102 - Lx LINE L1 -5 6649 6450 2 937 5620 162 52 9 chr15 46201882 46203024 -57291950 - L1_Mur2 LINE L1 -1147 4730 3539 2 937 1835 139 30 77 chr15 46203129 46203465 -57291509 - ORR1A2 LTR MaLR -7 320 1 2 937 358 297 0 38 chr15 46203524 46203585 -57291389 + ID_B1 SINE B4 117 177 -47 2 937 4744 57 3 0 chr15 46203585 46204181 -57290793 + L1Md_F2 LINE L1 5985 6582 0 2 937 358 297 0 38 chr15 46204181 46204224 -57290750 + ID_B1 SINE B4 178 217 -7 2 937 736 88 18 0 chr15 46204358 46204472 -57290502 + (TTC)n Simple_repeat Simple_repeat 2 117 0 2 937 723 44 0 0 chr15 46205884 46205975 -57288999 + IAPLTR3 LTR ERVK 1 91 -235 2 937 1978 110 3 37 chr15 46205937 46206258 -57288716 - IAPLTR3 LTR ERVK -16 310 1 2 937 587 266 75 36 chr15 46207235 46207648 -57287326 + L1MC1 LINE L1 5551 5979 -354 2 937 324 0 0 0 chr15 46208604 46208640 -57286334 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 937 333 0 0 0 chr15 46208938 46208975 -57285999 + (TATG)n Simple_repeat Simple_repeat 2 38 0 2 937 483 347 103 10 chr15 46209140 46209530 -57285444 + L1M4 LINE L1 3528 3953 -2193 2 937 446 325 37 18 chr15 46209933 46210096 -57284878 - MTE2b LTR MaLR -131 248 83 2 937 1830 112 28 28 chr15 46210183 46210505 -57284469 + RLTRETN_Mm LTR ERVK 1 322 0 2 937 391 276 196 7 chr15 46210630 46210783 -57284191 - ID_B1 SINE B4 -7 217 36 2 937 3279 33 8 0 chr15 46211771 46212164 -57282810 + MTA_Mm LTR MaLR 1 396 0 2 937 33 43 0 0 chr15 46212881 46212928 -57282046 + AT_rich Low_complexity Low_complexity 1 47 0 2 937 303 101 9 66 chr15 46213494 46213600 -57281374 + T-rich Low_complexity Low_complexity 1 100 0 2 937 1158 81 0 0 chr15 46213602 46213750 -57281224 - B1_Mus1 SINE Alu 0 148 1 2 937 23 54 0 0 chr15 46213806 46213843 -57281131 + AT_rich Low_complexity Low_complexity 1 37 0 2 937 323 373 88 62 chr15 46213856 46214196 -57280778 + ORR1E LTR MaLR 1 349 -10 2 937 515 255 69 6 chr15 46214635 46214782 -57280192 - MTD LTR MaLR -53 366 181 2 937 3597 155 34 18 chr15 46214782 46215452 -57279522 - Lx LINE L1 -1 6653 5973 2 937 405 322 149 65 chr15 46215452 46215613 -57279361 - MTD LTR MaLR -216 180 10 2 937 581 74 0 21 chr15 46215621 46215718 -57279256 + (CAGAGA)n Simple_repeat Simple_repeat 6 100 0 2 937 1106 106 0 11 chr15 46215726 46215908 -57279066 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 937 9758 117 28 6 chr15 46215911 46215945 -57279029 - MusHAL1 LINE L1 -728 1984 1945 3 937 2584 19 22 0 chr15 46215945 46216257 -57278717 - L1Md_F3 LINE L1 -2 6582 6264 3 937 9758 117 28 6 chr15 46216257 46217850 -57277124 - MusHAL1 LINE L1 -768 1944 322 3 937 14487 67 30 1 chr15 46217852 46220482 -57274492 - L1Md_F2 LINE L1 -2 6580 3868 3 937 1476 99 5 0 chr15 46220501 46220724 -57274250 - MusHAL1 LINE L1 -2379 333 110 3 937 18216 107 5 6 chr15 46220720 46224062 -57270912 - Lx3_Mus LINE L1 -753 6256 2927 3 937 3354 141 121 20 chr15 46224062 46224403 -57270571 - RMER17D2 LTR ERVK 0 809 453 3 937 498 17 0 0 chr15 46224403 46224462 -57270512 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 937 3354 141 121 20 chr15 46224462 46224806 -57270168 - RMER17D2 LTR ERVK -357 452 56 3 937 6390 119 15 12 chr15 46224818 46225897 -57269077 - Lx3_Mus LINE L1 -2953 2933 1852 3 937 6986 63 0 8 chr15 46225860 46226771 -57268203 + L1Md_F2 LINE L1 5656 6559 -23 3 937 311 371 72 17 chr15 46227791 46227972 -57267002 - MLT1F2 LTR MaLR -80 480 290 3 937 7703 181 31 1 chr15 46229685 46231686 -57263288 - Lx2 LINE L1 0 6997 4940 3 937 238 264 51 71 chr15 46231689 46231787 -57263187 + RMER20A LTR ERVK 185 280 -236 3 937 1030 204 4 4 chr15 46231787 46232013 -57262961 - Lx2 LINE L1 -1049 4837 4612 3 937 488 246 60 0 chr15 46232006 46232140 -57262834 + Lx3B LINE L1 6822 6963 -10 3 937 3901 165 36 12 chr15 46232183 46232942 -57262032 + L1_Mur2 LINE L1 3849 4625 -1252 3 937 341 129 0 14 chr15 46233275 46233346 -57261628 + (TA)n Simple_repeat Simple_repeat 1 70 0 3 937 680 118 7 0 chr15 46233339 46233475 -57261499 + (TAGA)n Simple_repeat Simple_repeat 4 140 0 3 937 350 377 0 0 chr15 46233477 46233583 -57261391 + Lx8 LINE L1 7197 7302 -171 3 937 228 167 0 0 chr15 46233623 46233671 -57261303 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 3 937 27 62 0 0 chr15 46233805 46233853 -57261121 + AT_rich Low_complexity Low_complexity 1 48 0 3 937 23 68 0 0 chr15 46233962 46234006 -57260968 + AT_rich Low_complexity Low_complexity 1 44 0 3 937 319 0 65 0 chr15 46234405 46234451 -57260523 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 3 937 23 33 0 0 chr15 46234972 46235002 -57259972 + AT_rich Low_complexity Low_complexity 1 30 0 3 937 233 254 45 0 chr15 46235392 46235459 -57259515 + MTEb LTR MaLR 306 375 -4 3 937 3056 84 43 0 chr15 46236069 46236487 -57258487 + L1_Mus1 LINE L1 6131 6566 -1 3 937 25 31 0 0 chr15 46237703 46237735 -57257239 + AT_rich Low_complexity Low_complexity 1 32 0 3 937 187 93 23 23 chr15 46238032 46238076 -57256898 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 3 937 206 58 36 55 chr15 46240698 46240753 -57254221 + (CAAAA)n Simple_repeat Simple_repeat 1 54 0 3 937 36 53 0 0 chr15 46241714 46241771 -57253203 + AT_rich Low_complexity Low_complexity 1 57 0 3 937 189 107 0 0 chr15 46241893 46241921 -57253053 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 3 937 324 0 0 0 chr15 46242141 46242177 -57252797 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 3 937 285 197 0 0 chr15 46242615 46242686 -57252288 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 937 366 376 9 5 chr15 46242942 46243153 -57251821 + B3 SINE B2 2 213 -3 3 937 472 377 40 6 chr15 46244636 46244812 -57250162 - B3A SINE B2 -16 182 1 3 937 1130 300 82 9 chr15 46245013 46245454 -57249520 + Lx6 LINE L1 6962 7434 -26 3 937 648 346 64 18 chr15 46245464 46245791 -57249183 + MLT1A1 LTR MaLR 57 398 -10 3 937 25 75 0 0 chr15 46245978 46246031 -57248943 + AT_rich Low_complexity Low_complexity 1 53 0 3 937 281 275 38 29 chr15 46246458 46246563 -57248411 + MLT1A LTR MaLR 269 374 0 3 937 3593 170 35 72 chr15 46246817 46247552 -57247422 + RLTR22_Mur LTR ERVK 1 703 -1145 3 937 462 121 66 0 chr15 46247552 46247643 -57247331 - L1Md_F2 LINE L1 -12 6570 6474 3 937 3593 170 35 72 chr15 46247643 46247742 -57247232 + RLTR22_Mur LTR ERVK 704 803 -1045 3 937 384 22 0 0 chr15 46247742 46247787 -57247187 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 937 6266 86 8 10 chr15 46247896 46248787 -57246187 + L1Md_F2 LINE L1 4697 5585 -298 3 937 7499 66 2 12 chr15 46248788 46249781 -57245193 + L1Md_F2 LINE L1 5587 6569 -13 3 937 1493 167 0 19 chr15 46249922 46250184 -57244790 + RLTR22_Mur LTR ERVK 1592 1848 0 3 937 1217 212 12 35 chr15 46250887 46251141 -57243833 + RMER19C LTR ERVK 32 279 -332 3 937 3340 259 61 59 chr15 46251168 46252570 -57242404 - L1_Mur3 LINE L1 -4384 1496 68 3 937 7058 155 75 13 chr15 46252572 46254133 -57240841 - Lx LINE L1 -198 6456 4738 3 937 189 0 0 0 chr15 46254133 46254154 -57240820 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 3 937 7058 193 91 13 chr15 46254154 46254248 -57240726 - Lx LINE L1 -1146 4737 4642 3 937 186 43 0 0 chr15 46254248 46254271 -57240703 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 937 7058 193 91 13 chr15 46254271 46254684 -57240290 - Lx LINE L1 -1242 4641 4235 3 937 237 196 0 0 chr15 46254710 46254766 -57240208 + GA-rich Low_complexity Low_complexity 1 56 0 3 937 2108 32 0 0 chr15 46254963 46255209 -57239765 + L1Md_F2 LINE L1 5341 5586 -297 3 937 7967 46 1 1 chr15 46255210 46256187 -57238787 + L1Md_F2 LINE L1 5588 6564 -18 3 937 420 20 0 0 chr15 46256439 46256488 -57238486 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 937 1093 115 0 0 chr15 46256529 46256677 -57238297 + B1_Mus1 SINE Alu 1 148 0 3 937 241 200 11 22 chr15 46256991 46257083 -57237891 + GA-rich Low_complexity Low_complexity 3 93 0 3 937 1049 90 0 7 chr15 46257204 46257349 -57237625 + B1_Mus1 SINE Alu 1 144 -4 3 937 672 48 0 0 chr15 46257353 46257437 -57237537 + (GAAA)n Simple_repeat Simple_repeat 1 84 0 3 937 229 272 84 24 chr15 46258188 46258271 -57236703 - LTR16C LTR ERVL -374 115 28 3 937 25 0 0 0 chr15 46258987 46259012 -57235962 + AT_rich Low_complexity Low_complexity 1 25 0 3 937 2615 202 54 60 chr15 46259613 46260008 -57234966 + RMER6C LTR ERVK 1 369 -321 3 937 4874 138 22 86 chr15 46260008 46260715 -57234259 + RLTR13D6 LTR ERVK 1 662 -240 3 937 882 124 14 7 chr15 46260715 46260861 -57234113 - B1_Mus2 SINE Alu 0 147 1 3 937 4874 138 22 86 chr15 46260861 46261117 -57233857 + RLTR13D6 LTR ERVK 663 902 0 3 937 2615 202 54 60 chr15 46261117 46261404 -57233570 + RMER6C LTR ERVK 370 679 -11 3 937 570 329 108 30 chr15 46261628 46261960 -57233014 + ORR1D2 LTR MaLR 9 366 -4 3 937 305 273 88 60 chr15 46262003 46262187 -57232787 - L1M2 LINE L1 -697 5606 5383 3 937 3537 147 71 32 chr15 46262219 46262998 -57231976 - RMER17D2 LTR ERVK 0 809 1 3 937 936 230 81 23 chr15 46263017 46263273 -57231701 - Lx7 LINE L1 -4 7692 7433 3 937 219 36 0 0 chr15 46263273 46263301 -57231673 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 937 936 230 81 23 chr15 46263301 46263351 -57231623 - Lx7 LINE L1 -264 7432 7369 3 937 1531 228 70 58 chr15 46263397 46263723 -57231251 + MTC LTR MaLR 1 348 -73 3 937 1047 97 14 0 chr15 46263723 46263868 -57231106 + B1_Mus1 SINE Alu 1 147 -1 3 937 1531 228 70 58 chr15 46263868 46263955 -57231019 + MTC LTR MaLR 349 419 -2 3 937 4435 259 54 28 chr15 46263959 46265470 -57229504 - Lx7 LINE L1 -687 7009 5450 3 937 455 330 132 37 chr15 46265510 46265995 -57228979 - L1M2 LINE L1 -1554 4589 4059 3 937 926 310 21 68 chr15 46266131 46266557 -57228417 - MTD LTR MaLR 0 419 14 3 937 2099 237 67 17 chr15 46266648 46267184 -57227790 + RMER1C Other Other 734 1296 -46 3 937 22 70 0 0 chr15 46267348 46267391 -57227583 + AT_rich Low_complexity Low_complexity 1 43 0 3 938 248 356 51 76 chr15 46268727 46268885 -57226089 + B4A SINE B4 11 164 -128 3 938 264 329 12 7 chr15 46269196 46269334 -57225640 - L1MD3 LINE L1 -498 7497 7390 3 938 315 0 0 0 chr15 46269388 46269423 -57225551 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 3 938 23 68 0 0 chr15 46269577 46269621 -57225353 + AT_rich Low_complexity Low_complexity 1 44 0 3 938 21 0 0 0 chr15 46270588 46270609 -57224365 + AT_rich Low_complexity Low_complexity 1 21 0 3 938 25 75 0 0 chr15 46272052 46272105 -57222869 + AT_rich Low_complexity Low_complexity 1 53 0 3 938 22 35 0 0 chr15 46272220 46272249 -57222725 + AT_rich Low_complexity Low_complexity 1 29 0 3 938 361 368 94 5 chr15 46273854 46274045 -57220929 - Lx8 LINE L1 -733 6740 6533 3 938 1257 216 257 50 chr15 46274052 46274616 -57220358 + RMER6C LTR ERVK 10 690 0 3 938 328 325 0 0 chr15 46274624 46274707 -57220267 - Lx7 LINE L1 -1168 6528 6446 3 938 548 216 0 8 chr15 46274783 46274900 -57220074 + Lx3C LINE L1 6092 6207 -769 3 938 2920 205 20 16 chr15 46274903 46275542 -57219432 + Lx3C LINE L1 6324 6965 -11 3 938 23 0 0 0 chr15 46275545 46275568 -57219406 + AT_rich Low_complexity Low_complexity 1 23 0 3 938 6334 1 0 0 chr15 46275701 46276405 -57218569 - L1Md_A LINE L1 0 6582 5879 3 938 249 0 0 0 chr15 46276405 46276433 -57218541 + L1Md_A LINE L1 5792 5819 -64 3 938 962 278 95 19 chr15 46276433 46276549 -57218425 + ORR1D1 LTR MaLR 21 172 -202 3 938 348 24 0 0 chr15 46276549 46276590 -57218384 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 938 962 263 99 15 chr15 46276590 46276780 -57218194 + ORR1D1 LTR MaLR 173 372 -2 3 938 22 56 0 0 chr15 46277931 46277967 -57217007 + AT_rich Low_complexity Low_complexity 1 36 0 3 938 468 0 0 0 chr15 46278945 46278997 -57215977 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 938 3157 117 46 8 chr15 46280170 46280669 -57214305 - L1Md_F2 LINE L1 -4 6578 6061 3 938 921 344 75 39 chr15 46280907 46281656 -57213318 + Charlie1a DNA MER1_type 7 782 -673 3 938 353 337 68 39 chr15 46281767 46282076 -57212898 - L1M2 LINE L1 -597 5703 5386 3 938 442 297 125 22 chr15 46282210 46282627 -57212347 - L1M2 LINE L1 -896 5247 4788 3 938 557 183 8 38 chr15 46282755 46282886 -57212088 + Lx5 LINE L1 4459 4585 -1292 3 938 3055 87 11 15 chr15 46282897 46283351 -57211623 - L1Md_F2 LINE L1 -3 6579 6128 3 938 2548 87 0 0 chr15 46283353 46283687 -57211287 + L1Md_F2 LINE L1 5767 6100 -482 3 938 2421 293 35 54 chr15 46283682 46284737 -57210237 + Lx5 LINE L1 5426 6449 -601 3 938 574 98 27 0 chr15 46284737 46284849 -57210125 + (TAGA)n Simple_repeat Simple_repeat 4 118 0 3 938 2421 316 50 74 chr15 46284849 46285325 -57209649 + Lx5 LINE L1 6450 6929 -121 3 938 23 54 0 0 chr15 46285369 46285406 -57209568 + AT_rich Low_complexity Low_complexity 1 37 0 3 938 227 192 18 71 chr15 46285515 46285571 -57209403 - B1_Mur2 SINE Alu -1 148 96 3 938 267 372 122 68 chr15 46285798 46286242 -57208732 + MER74A LTR ERVL 12 479 -79 3 938 4354 96 2 11 chr15 46287144 46287768 -57207206 - L1_Mus1 LINE L1 0 6567 5950 3 938 502 15 30 0 chr15 46288093 46288160 -57206814 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 3 938 29 0 0 0 chr15 46289092 46289121 -57205853 + AT_rich Low_complexity Low_complexity 1 29 0 3 938 2467 221 44 63 chr15 46289208 46289467 -57205507 + RMER6C LTR ERVK 21 284 -406 3 938 7089 32 46 0 chr15 46289467 46290334 -57204640 + L1Md_T LINE L1 5675 6581 -1 3 938 2467 221 44 63 chr15 46290334 46290739 -57204235 + RMER6C LTR ERVK 285 672 -18 3 938 2516 242 123 80 chr15 46290859 46291574 -57203400 + Lx7 LINE L1 6597 7349 -347 3 938 297 0 0 0 chr15 46291574 46291607 -57203367 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 3 938 2516 242 123 80 chr15 46291607 46291869 -57203105 + Lx7 LINE L1 7350 7616 -80 3 938 288 0 0 0 chr15 46291938 46291970 -57203004 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 3 938 413 328 73 53 chr15 46293952 46294158 -57200816 + B3 SINE B2 2 211 -5 4 938 686 364 30 30 chr15 46294210 46294680 -57200294 - Lx8 LINE L1 -779 6694 6225 4 938 261 279 0 23 chr15 46295079 46295167 -57199807 + Lx8 LINE L1 7384 7469 -4 4 938 26 30 0 0 chr15 46295185 46295218 -57199756 + AT_rich Low_complexity Low_complexity 1 33 0 4 938 477 123 4 0 chr15 46295489 46295567 -57199407 - L1_Mus4 LINE L1 -161 5722 5643 4 938 1781 149 0 4 chr15 46295721 46295990 -57198984 - L1_Mus4 LINE L1 -246 5637 5370 4 938 4136 128 5 15 chr15 46295990 46296638 -57198336 + L1_Mus4 LINE L1 5994 6634 -2 4 938 1471 276 24 22 chr15 46296983 46297487 -57197487 + RLTR16 LTR ERVK 1 505 0 4 938 1986 115 30 47 chr15 46297654 46298019 -57196955 - RLTR9A LTR ERVK 0 368 10 4 938 921 275 149 15 chr15 46298034 46298370 -57196604 - MTD LTR MaLR -34 385 5 4 938 2414 217 25 24 chr15 46298512 46299103 -57195871 + L1VL4 LINE L1 304 895 -5407 4 938 409 341 96 33 chr15 46299319 46299779 -57195195 + L1M4 LINE L1 4890 5389 -757 4 938 264 215 36 45 chr15 46300069 46300181 -57194793 + (TCTA)n Simple_repeat Simple_repeat 3 113 0 4 938 884 192 136 0 chr15 46300891 46301089 -57193885 + URR1A DNA MER1_type 2 226 0 4 938 294 305 0 19 chr15 46301379 46301486 -57193488 + Lx9 LINE L1 6845 6949 -695 4 938 2859 49 3 8 chr15 46301495 46301867 -57193107 - L1Md_F2 LINE L1 -13 6569 6200 4 938 1101 47 40 0 chr15 46301870 46302020 -57192954 + B2_Mm1t SINE B2 1 156 -37 4 938 351 0 0 0 chr15 46302020 46302059 -57192915 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 4 938 1677 282 65 31 chr15 46302059 46302115 -57192859 + Lx9 LINE L1 6944 6996 -648 4 938 1361 162 48 34 chr15 46302115 46302408 -57192566 + Lx LINE L1 6358 6654 0 4 938 1677 282 65 31 chr15 46302408 46303024 -57191950 + Lx9 LINE L1 6997 7639 -5 4 938 607 391 63 32 chr15 46303121 46303924 -57191050 + Lx8 LINE L1 6427 7254 -219 4 938 4235 274 81 24 chr15 46303981 46305148 -57189826 + Lx7 LINE L1 6145 7357 -339 4 938 192 77 0 0 chr15 46305148 46305174 -57189800 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 938 4235 274 81 24 chr15 46305174 46305474 -57189500 + Lx7 LINE L1 7358 7695 -1 4 938 2911 12 0 0 chr15 46305786 46306117 -57188857 + L1Md_T LINE L1 5256 5586 -297 4 938 8458 30 0 0 chr15 46306117 46307113 -57187861 + L1Md_T LINE L1 5587 6582 0 4 938 2914 86 2 14 chr15 46307118 46307542 -57187432 + L1Md_F2 LINE L1 6163 6581 -1 4 938 215 286 91 0 chr15 46308276 46308353 -57186621 - B3A SINE B2 -90 108 25 4 938 285 281 0 0 chr15 46308868 46308950 -57186024 + (CA)n Simple_repeat Simple_repeat 1 82 0 4 938 208 308 0 0 chr15 46308912 46308964 -57186010 + (CATG)n Simple_repeat Simple_repeat 1 52 0 4 938 3480 87 11 6 chr15 46309390 46309865 -57185109 - L1_Mus1 LINE L1 -3 6564 6088 4 938 1353 29 2 0 chr15 46309865 46310048 -57184926 + L1_Mus1 LINE L1 5625 5810 -1187 4 938 4484 158 7 17 chr15 46310055 46310892 -57184082 + Lx3A LINE L1 6153 6981 0 4 938 315 71 0 0 chr15 46311378 46311420 -57183554 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 938 1400 224 80 0 chr15 46311744 46312043 -57182931 + RLTR17 LTR ERVK 353 675 -17 4 938 7134 209 52 50 chr15 46312065 46314473 -57180501 + RMER3D-int LTR ERVK 23 2842 0 4 938 1787 161 74 31 chr15 46314473 46314825 -57180149 + RLTR17 LTR ERVK 1 367 -325 4 938 808 37 19 0 chr15 46314828 46314936 -57180038 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 4 938 1728 194 115 16 chr15 46314936 46315381 -57179593 + Lx5 LINE L1 3325 3813 -2064 4 938 5611 210 77 10 chr15 46315398 46317017 -57177957 + Lx5 LINE L1 5237 6955 -95 4 938 4370 113 10 12 chr15 46317015 46317783 -57177191 - L1_Mm LINE L1 -2174 3709 2948 4 938 3522 130 18 0 chr15 46317784 46318331 -57176643 + L1_Mus4 LINE L1 6080 6636 0 4 938 339 286 129 29 chr15 46318402 46318611 -57176363 + L1M4b LINE L1 2180 2409 -4925 4 938 257 269 34 27 chr15 46318875 46319024 -57175950 + L1M4b LINE L1 6132 6281 -763 4 938 347 315 22 52 chr15 46319075 46319209 -57175765 + ORR1D2 LTR MaLR 8 137 -233 4 938 776 269 26 64 chr15 46319214 46319513 -57175461 + Lx6 LINE L1 6491 6886 -574 4 938 204 226 0 0 chr15 46319885 46319938 -57175036 + T-rich Low_complexity Low_complexity 1 53 0 4 938 256 314 71 59 chr15 46319967 46320136 -57174838 - MLT1B LTR MaLR -217 173 3 4 938 245 338 100 0 chr15 46320685 46320765 -57174209 + MLT1A0 LTR MaLR 20 107 -258 4 938 277 327 9 80 chr15 46320820 46320933 -57174041 - MTEa LTR MaLR -272 107 3 4 938 357 24 0 0 chr15 46321929 46321971 -57173003 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 938 736 153 28 42 chr15 46322280 46322423 -57172551 + B1_Mus1 SINE Alu 1 141 -7 4 938 271 127 40 56 chr15 46322434 46322559 -57172415 + (CAAA)n Simple_repeat Simple_repeat 2 124 0 4 938 203 175 0 0 chr15 46322696 46322736 -57172238 + T-rich Low_complexity Low_complexity 1 40 0 4 938 447 19 0 0 chr15 46323057 46323109 -57171865 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 938 236 150 53 9 chr15 46323331 46323445 -57171529 + (TA)n Simple_repeat Simple_repeat 1 119 0 4 938 26 30 0 0 chr15 46323522 46323555 -57171419 + AT_rich Low_complexity Low_complexity 1 33 0 4 938 300 164 0 0 chr15 46323665 46323732 -57171242 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 938 199 140 20 20 chr15 46323890 46323941 -57171033 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 938 4897 189 49 27 chr15 46324078 46325113 -57169861 - Lx5 LINE L1 0 7050 5993 4 938 316 278 152 30 chr15 46325112 46325342 -57169632 + L1MA9 LINE L1 6016 6273 -39 4 938 333 241 35 0 chr15 46325565 46325652 -57169322 - MTEa LTR MaLR 0 379 290 4 938 1155 279 112 40 chr15 46325663 46326192 -57168782 + RMER15 LTR ERVL 8 574 -1 4 938 332 204 120 34 chr15 46326310 46326427 -57168547 - MTEa LTR MaLR -230 129 3 4 938 587 349 60 0 chr15 46326812 46327040 -57167934 - MTE2b LTR MaLR -69 310 69 4 938 659 291 289 58 chr15 46327040 46327579 -57167395 + RMER13A LTR ERVK 1 689 -219 4 938 26 50 0 0 chr15 46327884 46327924 -57167050 + AT_rich Low_complexity Low_complexity 1 40 0 4 938 909 280 109 39 chr15 46328157 46328569 -57166405 + Lx7 LINE L1 7025 7465 -231 4 938 27 92 0 0 chr15 46328691 46328767 -57166207 + AT_rich Low_complexity Low_complexity 1 76 0 4 938 435 96 42 34 chr15 46328952 46329071 -57165903 + (TTATA)n Simple_repeat Simple_repeat 5 124 0 4 938 43 71 0 0 chr15 46329078 46329163 -57165811 + AT_rich Low_complexity Low_complexity 1 85 0 4 938 182 236 51 77 chr15 46329229 46329307 -57165667 + L2 LINE L2 2067 2142 -1277 4 938 883 209 41 18 chr15 46329307 46329526 -57165448 - URR1A DNA MER1_type -2 224 1 4 938 386 162 49 12 chr15 46329671 46329752 -57165222 - MTE2a LTR MaLR -3 376 293 4 938 267 31 0 0 chr15 46329752 46329784 -57165190 + (TTC)n Simple_repeat Simple_repeat 2 33 0 4 938 196 53 26 26 chr15 46329786 46329825 -57165149 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 938 1025 72 36 0 chr15 46329825 46329964 -57165010 - B1_Mm SINE Alu -3 144 1 4 938 486 384 86 25 chr15 46329968 46330246 -57164728 - MTE2a LTR MaLR -79 300 6 4 938 613 322 126 35 chr15 46330248 46330566 -57164408 - MTE2a-int LTR MaLR 0 1580 1234 4 938 679 307 70 64 chr15 46330548 46330875 -57164099 - MTE2a LTR MaLR -42 337 9 4 938 22 35 0 0 chr15 46330986 46331015 -57163959 + AT_rich Low_complexity Low_complexity 1 29 0 4 938 235 372 14 14 chr15 46331238 46331385 -57163589 + L1MCa LINE L1 49 195 -5850 4 938 340 325 54 50 chr15 46332002 46332261 -57162713 + L1MCa LINE L1 1040 1299 -5452 4 938 352 300 79 87 chr15 46332623 46332889 -57162085 + L1MCa LINE L1 3526 3789 -2775 4 938 219 109 36 18 chr15 46332991 46333028 -57161946 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 4 938 2261 64 132 11 chr15 46333028 46333376 -57161598 - RLTR10 LTR ERVK 0 390 1 4 938 219 109 36 18 chr15 46333376 46333394 -57161580 + (TAAA)n Simple_repeat Simple_repeat 3 21 0 4 938 795 344 51 4 chr15 46333470 46333744 -57161230 + B4A SINE B4 2 288 -4 4 938 2135 123 15 6 chr15 46333842 46334176 -57160798 + IAPLTR1a_Mm LTR ERVK 1 337 0 4 938 11216 78 90 19 chr15 46334176 46337042 -57157932 + IAPEz-int LTR ERVK 8 3076 -3405 4 938 6530 60 12 16 chr15 46337028 46337882 -57157092 + IAPEz-int LTR ERVK 5630 6479 -2 4 938 2135 123 15 6 chr15 46337884 46338218 -57156756 + IAPLTR1a_Mm LTR ERVK 1 337 0 4 938 228 67 0 0 chr15 46338365 46338395 -57156579 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 938 333 0 0 0 chr15 46338492 46338529 -57156445 + (A)n Simple_repeat Simple_repeat 1 37 0 4 938 189 154 0 0 chr15 46338763 46338802 -57156172 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 938 30 45 0 0 chr15 46339488 46339532 -57155442 + AT_rich Low_complexity Low_complexity 1 44 0 4 938 628 327 36 49 chr15 46340348 46340573 -57154401 + B4A SINE B4 3 224 -68 4 938 231 60 60 0 chr15 46340584 46340634 -57154340 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 4 938 315 209 52 0 chr15 46341041 46341156 -57153818 + (TA)n Simple_repeat Simple_repeat 1 121 0 4 938 432 0 0 0 chr15 46341361 46341409 -57153565 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 938 33 56 0 0 chr15 46342775 46342829 -57152145 + AT_rich Low_complexity Low_complexity 1 54 0 4 938 281 355 86 14 chr15 46342982 46343202 -57151772 - LTR80A LTR ERVL -280 303 68 4 938 443 298 41 0 chr15 46344078 46344199 -57150775 - RMER15 LTR ERVL 0 575 450 4 938 644 304 0 0 chr15 46344216 46344364 -57150610 + B3 SINE B2 56 203 -13 4 938 2382 49 0 0 chr15 46344382 46344670 -57150304 - L1Md_F3 LINE L1 -224 6360 6073 4 938 244 322 8 83 chr15 46344699 46344831 -57150143 + Lx8 LINE L1 7000 7121 -352 4 938 25 0 0 0 chr15 46345031 46345056 -57149918 + AT_rich Low_complexity Low_complexity 1 25 0 4 938 330 136 13 154 chr15 46347157 46347235 -57147739 - HAL1-3A_ME LINE L1 -816 2042 1976 4 938 30 0 0 0 chr15 46349950 46349980 -57144994 + AT_rich Low_complexity Low_complexity 1 30 0 4 938 1043 153 12 0 chr15 46350178 46350348 -57144626 - B2_Mm1t SINE B2 -19 174 3 4 938 1399 270 14 11 chr15 46350465 46350821 -57144153 - Lx2B LINE L1 -8 6992 6636 4 938 26 88 0 0 chr15 46351034 46351102 -57143872 + AT_rich Low_complexity Low_complexity 1 68 0 4 938 1011 90 7 46 chr15 46351888 46351977 -57142997 - B1_Mus2 SINE Alu 0 147 64 4 938 3251 44 3 0 chr15 46351977 46352361 -57142613 + IAPEY_LTR LTR ERVK 1 385 0 4 938 1011 90 7 46 chr15 46352361 46352423 -57142551 - B1_Mus2 SINE Alu -84 63 2 4 938 7737 126 54 16 chr15 46352497 46353067 -57141907 + RMER16-int LTR ERVK 87 703 -4703 4 938 284 0 28 0 chr15 46353067 46353103 -57141871 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 4 938 7737 126 54 16 chr15 46353103 46353821 -57141153 + RMER16-int LTR ERVK 704 1424 -3982 4 938 1103 174 21 52 chr15 46353854 46354113 -57140861 + RMER16-int LTR ERVK 1328 1537 -3869 4 938 207 0 0 0 chr15 46354121 46354144 -57140830 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 938 502 330 25 10 chr15 46354242 46354326 -57140648 + RMER16-int LTR ERVK 1416 1499 -1815 5 938 213 65 0 0 chr15 46354326 46354357 -57140617 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 938 2559 203 107 67 chr15 46354357 46355201 -57139773 + RMER16-int LTR ERVK 1500 2991 -4415 5 938 3589 85 4 0 chr15 46355201 46355681 -57139293 - L1_Mus1 LINE L1 0 6567 6086 5 938 2559 157 104 6 chr15 46355681 46355886 -57139088 + RMER16-int LTR ERVK 1930 2133 -3273 5 938 483 276 19 53 chr15 46356073 46356262 -57138712 + MTD LTR MaLR 18 365 -54 5 938 378 42 0 0 chr15 46356284 46356332 -57138642 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 938 401 291 122 33 chr15 46356658 46356995 -57137979 - L1M5 LINE L1 -444 5729 5363 5 938 1142 156 0 11 chr15 46357303 46357485 -57137489 + RLTR17 LTR ERVK 1 180 -512 5 938 2765 183 51 6 chr15 46357479 46358011 -57136963 + RLTR17 LTR ERVK 91 646 -46 5 938 5202 88 0 3 chr15 46358052 46358757 -57136217 - RLTR13D5 LTR ERVK -320 703 1 5 938 254 312 31 41 chr15 46358796 46358893 -57136081 + PB1D10 SINE Alu 21 116 -1 5 938 266 225 84 26 chr15 46359156 46359300 -57135674 - L1M4 LINE L1 -389 5785 5626 5 938 263 281 135 0 chr15 46359333 46359429 -57135545 - PB1D7 SINE Alu -2 118 10 5 938 245 254 48 0 chr15 46359380 46359443 -57135531 - ID_B1 SINE B4 -83 141 76 5 938 24 32 0 0 chr15 46359574 46359605 -57135369 + AT_rich Low_complexity Low_complexity 1 31 0 5 938 440 350 5 5 chr15 46359615 46359819 -57135155 + B3 SINE B2 3 206 -10 5 938 1830 195 135 2 chr15 46359897 46360304 -57134670 - Lx3B LINE L1 -3 6970 6510 5 938 5409 96 14 36 chr15 46360868 46361339 -57133635 - L1_Mur1 LINE L1 -3823 2063 1600 5 938 980 93 29 0 chr15 46361339 46361479 -57133495 - B1_Mus2 SINE Alu -1 146 3 5 938 5409 170 100 37 chr15 46361479 46362702 -57132272 - L1_Mur1 LINE L1 -4287 1599 56 5 938 910 213 114 35 chr15 46363508 46363651 -57131323 - Lx7 LINE L1 0 7696 7532 5 938 249 33 0 0 chr15 46363651 46363681 -57131293 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 5 938 910 213 114 35 chr15 46363681 46363853 -57131121 - Lx7 LINE L1 -165 7531 7356 5 938 218 109 45 45 chr15 46363854 46363921 -57131053 + (TAA)n Simple_repeat Simple_repeat 3 69 0 5 938 825 243 23 5 chr15 46363937 46364152 -57130822 - Lx7 LINE L1 -332 7364 7146 5 938 5769 89 0 1 chr15 46364152 46364961 -57130013 + RLTR22_Mus LTR ERVK 1 808 -1000 5 938 2237 105 0 20 chr15 46365164 46365513 -57129461 - L1Md_F2 LINE L1 0 6582 6241 5 938 470 289 74 101 chr15 46365550 46365846 -57129128 + RMER12 LTR ERVK 1035 1322 0 5 938 885 241 67 12 chr15 46365850 46366090 -57128884 - Lx6 LINE L1 -610 6850 6598 5 938 579 309 6 58 chr15 46366400 46366572 -57128402 + RSINE1 SINE B4 3 165 0 5 938 603 0 0 0 chr15 46366765 46366832 -57128142 + (GGAAA)n Simple_repeat Simple_repeat 5 71 0 5 938 243 0 0 0 chr15 46366885 46366912 -57128062 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 5 938 369 0 0 0 chr15 46366939 46366980 -57127994 + (GA)n Simple_repeat Simple_repeat 2 42 0 5 938 22 0 0 0 chr15 46367274 46367296 -57127678 + AT_rich Low_complexity Low_complexity 1 22 0 5 938 783 285 14 9 chr15 46367364 46367580 -57127394 + Lx4B LINE L1 6527 6743 -315 5 938 33 66 0 0 chr15 46368984 46369045 -57125929 + AT_rich Low_complexity Low_complexity 1 61 0 5 938 2762 140 21 35 chr15 46369420 46369902 -57125072 + MT2C_Mm LTR ERVL 1 475 0 5 938 29 28 0 0 chr15 46370366 46370402 -57124572 + AT_rich Low_complexity Low_complexity 1 36 0 5 938 261 125 0 0 chr15 46371069 46371117 -57123857 + Lx LINE L1 6600 6647 -7 5 938 575 164 6 136 chr15 46371118 46371294 -57123680 - RLTR19-int LTR ERVK -3831 2306 2154 5 938 253 146 0 0 chr15 46371449 46371490 -57123484 - RLTR19-int LTR ERVK -4070 2067 2027 5 938 235 284 161 22 chr15 46371491 46371628 -57123346 - MTC-int LTR MaLR -192 1066 911 5 938 650 156 16 8 chr15 46371629 46371752 -57123222 - RLTR19-int LTR ERVK -4909 1228 1105 5 938 206 116 23 0 chr15 46371881 46371924 -57123050 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 5 938 324 83 0 0 chr15 46372159 46372207 -57122767 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 938 393 238 40 16 chr15 46372557 46372681 -57122293 + CT-rich Low_complexity Low_complexity 4 130 0 5 938 22 70 0 0 chr15 46372843 46372886 -57122088 + AT_rich Low_complexity Low_complexity 1 43 0 5 938 23 54 0 0 chr15 46373123 46373160 -57121814 + AT_rich Low_complexity Low_complexity 1 37 0 5 938 366 132 0 14 chr15 46373951 46374020 -57120954 + Lx2B LINE L1 6928 6995 -5 5 938 27 0 0 0 chr15 46374316 46374343 -57120631 + AT_rich Low_complexity Low_complexity 1 27 0 5 938 1016 280 83 3 chr15 46374461 46374751 -57120223 + MTD LTR MaLR 11 323 -96 5 938 226 216 147 13 chr15 46374854 46374929 -57120045 + MTD LTR MaLR 335 419 0 5 938 227 31 0 30 chr15 46375233 46375266 -57119708 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 5 938 1074 110 0 0 chr15 46375268 46375413 -57119561 - B1_Mus2 SINE Alu -2 145 1 5 938 519 372 23 9 chr15 46375755 46375975 -57118999 + MTE2b LTR MaLR 31 253 -126 5 938 24 0 0 0 chr15 46376438 46376462 -57118512 + AT_rich Low_complexity Low_complexity 1 24 0 5 938 29 0 0 0 chr15 46376849 46376878 -57118096 + AT_rich Low_complexity Low_complexity 1 29 0 5 938 2276 212 0 7 chr15 46377326 46377781 -57117193 - Lx2B LINE L1 -496 6504 6053 5 938 508 124 43 0 chr15 46378144 46378244 -57116730 - Lx2B LINE L1 -555 6099 5982 5 938 1853 155 3 34 chr15 46378244 46378565 -57116409 - RLTR10E LTR ERVK 0 311 1 5 938 5788 96 1 92 chr15 46378580 46379518 -57115456 - MMERVK10C-int LTR ERVK -31 7550 6698 5 938 8579 86 47 5 chr15 46379504 46381294 -57113680 - MMERVK10C-int LTR ERVK -1592 5989 4125 5 938 2405 91 46 0 chr15 46381293 46381644 -57113330 - MMERVK10C-int LTR ERVK -3662 3919 3553 5 938 1662 69 90 4 chr15 46381641 46381875 -57113099 - MMERVK10C-int LTR ERVK -4515 3066 2813 5 938 3762 87 56 13 chr15 46381897 46382435 -57112539 - MMERVK10C-int LTR ERVK -5136 2445 1885 5 938 382 185 123 0 chr15 46382426 46382507 -57112467 - MMERVK10C-int LTR ERVK -4227 1179 1089 5 938 1578 193 179 23 chr15 46382512 46382942 -57112032 - MMERVK10C-int LTR ERVK -4587 819 323 5 938 2745 117 5 5 chr15 46382942 46383353 -57111621 - MMERVK10C-int LTR ERVK -6730 851 441 5 938 1174 149 20 10 chr15 46383446 46383650 -57111324 - MMERVK10C-int LTR ERVK -7151 430 225 5 938 250 227 0 0 chr15 46383650 46383694 -57111280 - RLTR27 LTR ERVK -34 275 232 5 938 650 82 30 10 chr15 46383695 46383794 -57111180 - MMERVK10C-int LTR ERVK -7478 103 3 5 938 1836 172 3 3 chr15 46383796 46384105 -57110869 - RLTR10E LTR ERVK 0 311 3 5 938 1812 213 91 7 chr15 46384134 46384565 -57110409 + Lx2B LINE L1 6521 6987 -13 5 938 213 121 0 0 chr15 46384620 46384653 -57110321 + (A)n Simple_repeat Simple_repeat 1 33 0 5 938 14663 121 56 10 chr15 46384861 46389853 -57105121 + L1Md_F2 LINE L1 446 6037 -545 5 938 6882 68 7 1 chr15 46389851 46390056 -57104918 - L1Md_A LINE L1 -3701 2182 1978 5 938 201 39 0 0 chr15 46390056 46390082 -57104892 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 938 6882 108 6 18 chr15 46390082 46391565 -57103409 - L1Md_A LINE L1 -3906 1977 515 5 938 1172 260 11 3 chr15 46391637 46391988 -57102986 - L1_Mur3 LINE L1 -3163 2717 2364 5 938 1546 238 64 2 chr15 46391975 46392459 -57102515 - L1_Mur3 LINE L1 -3834 2046 1533 5 938 403 211 0 11 chr15 46392518 46392609 -57102365 - L1_Mur3 LINE L1 -3605 2275 2186 5 938 935 252 122 17 chr15 46392606 46392901 -57102073 - Lx5 LINE L1 -376 6674 6349 5 938 913 250 70 4 chr15 46392902 46393131 -57101843 + Lx5 LINE L1 6800 7043 -7 5 938 429 206 10 0 chr15 46393132 46393234 -57101740 - L1_Mur3 LINE L1 -4332 1548 1446 5 938 2176 270 42 8 chr15 46393245 46393862 -57101112 - L1_Mur3 LINE L1 -6650 1078 441 5 938 1547 161 105 30 chr15 46393862 46394196 -57100778 + Lx2 LINE L1 6477 6835 -162 5 938 2961 15 3 0 chr15 46394196 46394532 -57100442 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 938 21273 11 2 0 chr15 46394532 46396891 -57098083 - IAPEz-int LTR ERVK 0 6481 4117 5 938 467 66 0 0 chr15 46396883 46396944 -57098030 - IAPEz-int LTR ERVK -2896 3585 3525 5 938 917 81 24 0 chr15 46396944 46397067 -57097907 - IAPEz-int LTR ERVK -2770 4910 4785 5 938 1833 111 4 4 chr15 46397064 46397326 -57097648 - IAPEz-int LTR ERVK -5183 2497 2236 5 938 442 66 0 32 chr15 46397315 46397378 -57097596 - IAPEz-int LTR ERVK -5062 1419 1359 5 938 4581 64 28 35 chr15 46397378 46398029 -57096945 - IAPEz-int LTR ERVK -5819 662 17 5 938 349 146 0 0 chr15 46398010 46398065 -57096909 - IAPEz-int LTR ERVK -1930 57 3 5 938 2936 21 0 6 chr15 46398067 46398406 -57096568 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 938 574 209 19 0 chr15 46398407 46398565 -57096409 + Lx2 LINE L1 6831 6991 -6 5 938 417 294 30 30 chr15 46398587 46398755 -57096219 - L1_Mur3 LINE L1 -7513 215 48 5 938 518 0 16 0 chr15 46398948 46399010 -57095964 + (GA)n Simple_repeat Simple_repeat 2 64 0 5 939 204 206 40 27 chr15 46399914 46399989 -57094985 + (TTATA)n Simple_repeat Simple_repeat 5 80 0 5 939 444 317 88 46 chr15 46400585 46400823 -57094151 + MLT1B LTR MaLR 6 253 -137 5 939 853 324 60 34 chr15 46400821 46401288 -57093686 - MER67C LTR ERV1 -7 704 226 5 939 512 329 95 36 chr15 46402074 46402431 -57092543 + Lx8 LINE L1 6576 6953 -520 5 939 310 313 98 89 chr15 46402679 46402914 -57092060 - RLTR12B LTR ERVK -42 486 250 5 939 570 260 93 56 chr15 46402941 46403222 -57091752 - RLTR12B LTR ERVK -261 267 1 5 939 25 31 0 0 chr15 46403493 46403525 -57091449 + AT_rich Low_complexity Low_complexity 1 32 0 5 939 277 188 58 0 chr15 46403894 46403963 -57091011 - B1_Mur3 SINE Alu 0 149 77 5 939 2797 178 59 17 chr15 46403974 46404499 -57090475 - Lx LINE L1 0 6654 6108 5 939 378 0 0 0 chr15 46404506 46404548 -57090426 + (TTA)n Simple_repeat Simple_repeat 2 43 0 5 939 8130 168 32 3 chr15 46404548 46405241 -57089733 - Lx4A LINE L1 -6 7052 6325 5 939 627 39 0 0 chr15 46405241 46405319 -57089655 + (TG)n Simple_repeat Simple_repeat 2 79 0 5 939 8130 168 32 3 chr15 46405319 46405470 -57089504 - Lx4A LINE L1 -734 6324 6167 5 939 216 0 0 0 chr15 46405470 46405494 -57089480 + (CCA)n Simple_repeat Simple_repeat 1 24 0 5 939 10631 160 28 28 chr15 46405494 46406215 -57088759 - Lx4A LINE L1 -892 6166 5440 5 939 270 0 0 0 chr15 46406215 46406245 -57088729 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 5 939 10631 149 14 42 chr15 46406245 46407606 -57087368 - Lx4A LINE L1 -438 5439 4083 5 939 1031 103 14 7 chr15 46407606 46407752 -57087222 + B1_Mus2 SINE Alu 1 147 0 5 939 10631 211 101 20 chr15 46407752 46409118 -57085856 - Lx4A LINE L1 -1795 4082 2389 5 939 27 62 0 0 chr15 46409168 46409216 -57085758 + AT_rich Low_complexity Low_complexity 1 48 0 5 939 23 33 0 0 chr15 46409304 46409334 -57085640 + AT_rich Low_complexity Low_complexity 1 30 0 5 939 27047 141 16 5 chr15 46409731 46415824 -57079150 + L1_Mus1 LINE L1 393 6567 0 5 939 2263 241 32 26 chr15 46415904 46416035 -57078939 + RMER13B LTR ERVK 368 508 -400 5 939 192 77 0 0 chr15 46416035 46416061 -57078913 + (CAAGC)n Simple_repeat Simple_repeat 5 30 0 5 939 2263 241 32 26 chr15 46416061 46416467 -57078507 + RMER13B LTR ERVK 509 908 0 5 939 2545 249 15 3 chr15 46416467 46417076 -57077898 + Lx4B LINE L1 6095 6710 -348 5 939 432 0 0 0 chr15 46417079 46417127 -57077847 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 939 3386 55 0 2 chr15 46417267 46417700 -57077274 + L1Md_F3 LINE L1 6140 6571 -13 5 939 358 108 0 26 chr15 46419290 46419366 -57075608 + (TTTTG)n Simple_repeat Simple_repeat 2 75 0 5 939 940 279 28 4 chr15 46419406 46419658 -57075316 + Lx6 LINE L1 7183 7440 -20 5 939 24 85 0 0 chr15 46419906 46419965 -57075009 + AT_rich Low_complexity Low_complexity 1 59 0 5 939 229 300 11 11 chr15 46420000 46420091 -57074883 + CT-rich Low_complexity Low_complexity 2 92 0 5 939 232 180 20 0 chr15 46420039 46420089 -57074885 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 5 939 534 37 24 12 chr15 46420667 46420749 -57074225 + (TA)n Simple_repeat Simple_repeat 2 84 0 5 939 2468 298 17 35 chr15 46420792 46421675 -57073299 - Lx9 LINE L1 -183 7461 6595 5 939 2805 87 50 0 chr15 46422533 46422934 -57072040 + BGLII LTR ERVK 1 421 0 5 939 24 77 0 0 chr15 46423283 46423335 -57071639 + AT_rich Low_complexity Low_complexity 1 52 0 5 939 612 117 0 0 chr15 46423642 46423736 -57071238 + BGLII LTR ERVK 311 404 -17 6 939 1023 203 74 8 chr15 46423966 46424209 -57070765 - RLTR22_Mur LTR ERVK 0 1848 1590 6 939 3277 194 73 20 chr15 46424388 46425000 -57069974 - RLTR22_Mur LTR ERVK -1040 808 172 6 939 529 40 13 13 chr15 46425000 46425077 -57069897 + (TA)n Simple_repeat Simple_repeat 2 78 0 6 939 405 0 0 0 chr15 46425077 46425121 -57069853 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 939 3277 194 73 20 chr15 46425121 46425274 -57069700 - RLTR22_Mur LTR ERVK -1677 171 2 6 939 338 371 17 20 chr15 46425317 46425609 -57069365 - Lx9 LINE L1 -176 7468 7178 6 939 1694 216 123 37 chr15 46425612 46426027 -57068947 + RLTR11A LTR ERVK 1 457 -71 6 939 423 0 0 0 chr15 46426027 46426074 -57068900 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 939 1694 216 123 37 chr15 46426074 46426144 -57068830 + RLTR11A LTR ERVK 458 527 -1 6 939 368 349 0 96 chr15 46426249 46426395 -57068579 - B3 SINE B2 -28 188 57 6 939 22 56 0 0 chr15 46426923 46426959 -57068015 + AT_rich Low_complexity Low_complexity 1 36 0 6 939 643 321 67 32 chr15 46427180 46427463 -57067511 - Charlie13b DNA Charlie -165 347 55 6 939 322 297 0 0 chr15 46428564 46428655 -57066319 + Lx7 LINE L1 6506 6596 -1100 6 939 406 181 145 0 chr15 46428697 46428780 -57066194 + Lx7 LINE L1 6868 6962 -734 6 939 1008 184 85 16 chr15 46431052 46431300 -57063674 - RMER10A LTR ERVL 0 442 178 6 939 2016 181 10 58 chr15 46431303 46431720 -57063254 - RMER10B LTR ERVL -1 397 1 6 939 396 299 87 47 chr15 46431745 46431998 -57062976 - RMER17C-int LTR ERVK -59 3179 2917 6 939 594 244 11 11 chr15 46432161 46432343 -57062631 + RMER10B LTR ERVL 83 264 -134 6 939 907 223 40 0 chr15 46432368 46432570 -57062404 + RMER10B LTR ERVL 189 398 0 6 939 743 281 0 21 chr15 46432570 46432758 -57062216 - RMER10A LTR ERVL -257 185 2 6 939 38 0 0 0 chr15 46433467 46433505 -57061469 + AT_rich Low_complexity Low_complexity 1 38 0 6 939 29 60 0 0 chr15 46433543 46433593 -57061381 + AT_rich Low_complexity Low_complexity 1 50 0 6 939 512 333 7 45 chr15 46433593 46433747 -57061227 - RSINE1 SINE B4 -4 161 14 6 939 992 295 25 174 chr15 46433748 46433890 -57061084 - RMER19C LTR ERVK 0 611 471 6 939 516 32 0 0 chr15 46433890 46433952 -57061022 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 939 992 295 25 174 chr15 46433952 46434198 -57060776 - RMER19C LTR ERVK -141 470 275 6 939 327 49 0 0 chr15 46434198 46434239 -57060735 + (CTA)n Simple_repeat Simple_repeat 1 41 0 6 939 992 295 25 174 chr15 46434239 46434567 -57060407 - RMER19C LTR ERVK -337 274 1 6 939 324 0 0 0 chr15 46434927 46434963 -57060011 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 939 3061 166 32 23 chr15 46435680 46436240 -57058734 - Lx2B LINE L1 -26 6974 6410 6 939 1867 138 3 0 chr15 46436240 46436530 -57058444 + ORR1A2 LTR MaLR 1 291 -36 6 939 1007 205 0 0 chr15 46436530 46436730 -57058244 - Lx2B LINE L1 -884 6113 5914 6 939 1329 199 12 4 chr15 46436731 46436988 -57057986 - MYSERV6-int LTR ERVK -7507 1452 1194 6 939 567 278 55 15 chr15 46436987 46437261 -57057713 - MYSERV6-int LTR ERVK -6204 346 62 6 939 382 365 20 20 chr15 46437383 46437579 -57057395 - MYSERV6-int LTR ERVK -8647 312 117 6 939 4976 36 0 0 chr15 46438079 46438669 -57056305 - L1Md_T LINE L1 0 6582 5993 6 939 3530 46 7 2 chr15 46438682 46439118 -57055856 + L1Md_A LINE L1 5588 6025 -557 6 939 742 244 79 52 chr15 46439240 46439568 -57055406 - RLTR15 LTR ERVK -21 338 2 6 939 210 37 0 0 chr15 46439609 46439636 -57055338 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 939 4589 194 42 17 chr15 46439677 46440734 -57054240 - Lx3C LINE L1 -334 6642 4807 6 939 940 324 49 83 chr15 46441403 46441955 -57053019 + Lx5 LINE L1 6510 7042 -8 6 939 233 269 22 45 chr15 46442006 46442185 -57052789 + (TTAAA)n Simple_repeat Simple_repeat 1 175 0 6 939 691 254 119 135 chr15 46442311 46442689 -57052285 - ORR1D1 LTR MaLR -2 372 1 6 939 1121 123 67 0 chr15 46442949 46443128 -57051846 - B2_Mm2 SINE B2 0 195 5 6 939 25 0 0 0 chr15 46443506 46443531 -57051443 + AT_rich Low_complexity Low_complexity 1 25 0 6 939 32 75 0 0 chr15 46444503 46444570 -57050404 + AT_rich Low_complexity Low_complexity 1 67 0 6 939 285 149 21 0 chr15 46445272 46445319 -57049655 + RLTR16 LTR ERVK 1 48 -457 6 939 6284 176 62 35 chr15 46445585 46447431 -57047543 - L1Md_F LINE L1 -3554 2329 410 6 939 320 0 25 0 chr15 46447431 46447471 -57047503 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 6 939 2462 240 94 84 chr15 46447471 46447678 -57047296 - L1Md_F LINE L1 -6229 409 222 6 939 539 225 35 7 chr15 46447801 46447944 -57047030 + Lx3C LINE L1 6830 6976 0 6 939 990 202 86 4 chr15 46447979 46448247 -57046727 + Lx6 LINE L1 5177 5466 -414 6 939 474 236 62 25 chr15 46448253 46448414 -57046560 - RNLTR23 LTR ERVK -10 632 466 6 939 3048 317 57 41 chr15 46449108 46449317 -57045657 - RNERVK23-int LTR ERVK -403 7814 7579 6 939 1090 112 6 6 chr15 46449317 46449496 -57045478 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 6 939 3048 317 57 41 chr15 46449496 46450929 -57044045 - RNERVK23-int LTR ERVK -639 7578 6148 6 939 491 104 0 0 chr15 46450979 46451046 -57043928 - tRNA-Lys-AAG tRNA tRNA -7 69 3 6 939 4347 22 0 2 chr15 46451197 46451704 -57043270 - L1Md_T LINE L1 -697 5186 4681 6 939 3597 14 0 2 chr15 46451698 46452112 -57042862 + L1Md_T LINE L1 5174 5586 -297 6 939 8472 32 0 0 chr15 46452112 46453108 -57041866 + L1Md_T LINE L1 5587 6582 0 6 939 2608 332 39 64 chr15 46453109 46454823 -57040151 - RNERVK23-int LTR ERVK -6379 1838 169 6 939 469 261 6 42 chr15 46454992 46455160 -57039814 - RNLTR23 LTR ERVK 0 642 481 6 939 1916 237 10 2 chr15 46455420 46455886 -57039088 + Lx6 LINE L1 5457 5929 -1531 6 939 4574 126 12 20 chr15 46457354 46458086 -57036888 - L1_Mus4 LINE L1 -6 6630 5905 6 939 8156 180 23 13 chr15 46458944 46460553 -57034421 - L1_Mur1 LINE L1 -1799 4087 2463 6 939 577 275 144 39 chr15 46460553 46460886 -57034088 + RLTR9A LTR ERVK 1 368 0 6 939 8156 180 23 13 chr15 46460886 46461016 -57033958 - L1_Mur1 LINE L1 -3424 2462 2331 6 939 2574 154 62 16 chr15 46461012 46461561 -57033413 + L1_Mur2 LINE L1 4092 4665 -1212 6 939 5551 137 20 20 chr15 46461565 46462478 -57032496 + Lx LINE L1 5742 6654 0 6 939 414 0 0 0 chr15 46462814 46462860 -57032114 + (TA)n Simple_repeat Simple_repeat 1 46 0 6 939 447 372 30 5 chr15 46462935 46463132 -57031842 - B3 SINE B2 -4 212 11 6 939 236 243 48 19 chr15 46463286 46463391 -57031583 + Lx9 LINE L1 7537 7644 0 6 939 1080 109 0 0 chr15 46463569 46463716 -57031258 + B1_Mm SINE Alu 1 147 0 6 939 2213 252 76 6 chr15 46463869 46464419 -57030555 - Lx5 LINE L1 -28 7022 6434 6 939 627 126 10 10 chr15 46464423 46464527 -57030447 + MT2C_Mm LTR ERVL 294 397 -78 6 939 498 211 8 50 chr15 46464517 46464637 -57030337 + B3 SINE B2 102 216 0 6 939 457 205 0 0 chr15 46464687 46464765 -57030209 + L1VL4 LINE L1 1 78 -6224 6 939 910 110 25 143 chr15 46464755 46464999 -57029975 + MusHAL1 LINE L1 1882 2096 -616 6 939 8292 175 16 11 chr15 46464980 46465520 -57029454 + Lx LINE L1 4329 4863 -1020 6 939 5328 40 18 1 chr15 46465520 46466179 -57028795 - L1Md_F2 LINE L1 -1 6581 5912 6 939 8292 169 21 11 chr15 46466179 46467930 -57027044 + Lx LINE L1 4864 6639 -15 6 939 226 318 9 26 chr15 46468258 46468371 -57026603 - Lx9 LINE L1 -201 7443 7333 6 939 499 289 172 12 chr15 46468621 46468892 -57026082 - Lx9 LINE L1 -314 7330 6884 6 939 24 32 0 0 chr15 46469922 46469953 -57025021 + AT_rich Low_complexity Low_complexity 1 31 0 6 939 770 310 62 11 chr15 46470083 46470439 -57024535 - ORR1D1 LTR MaLR 0 374 1 6 939 21 0 0 0 chr15 46470540 46470561 -57024413 + AT_rich Low_complexity Low_complexity 1 21 0 6 939 2147 264 92 2 chr15 46470663 46471293 -57023681 - Lx6 LINE L1 -350 7110 6424 6 939 682 203 42 13 chr15 46471286 46471469 -57023505 - Lx7 LINE L1 -1675 6021 5836 6 939 730 192 66 33 chr15 46471470 46471500 -57023474 - B2_Mm2 SINE B2 -4 191 164 6 939 420 20 0 0 chr15 46471500 46471549 -57023425 + (TTCA)n Simple_repeat Simple_repeat 3 51 0 6 939 730 192 66 33 chr15 46471549 46471701 -57023273 - B2_Mm2 SINE B2 -32 163 3 6 939 2931 280 138 10 chr15 46472095 46473470 -57021504 - Lx6 LINE L1 -313 7147 5597 6 939 303 238 40 0 chr15 46473445 46473546 -57021428 - L1_Mur3 LINE L1 -2296 3584 3480 6 939 212 208 19 19 chr15 46473548 46473602 -57021372 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 6 939 4048 224 39 45 chr15 46473602 46474924 -57020050 - L1_Mur3 LINE L1 -2400 3480 2167 6 939 5753 212 39 15 chr15 46474940 46477281 -57017693 - Lx5 LINE L1 0 7050 4637 6 939 1227 199 74 15 chr15 46477286 46477829 -57017145 - L1_Mur3 LINE L1 -4304 1576 989 6 939 207 0 0 0 chr15 46478413 46478436 -57016538 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 939 417 165 25 25 chr15 46478438 46478535 -57016439 - B1_Mus2 SINE Alu 0 147 47 6 939 5442 166 45 8 chr15 46478544 46479563 -57015411 - L1_Mus4 LINE L1 -168 5715 4659 6 939 6169 108 24 7 chr15 46479564 46480556 -57014418 + L1_Mus4 LINE L1 5704 6636 0 6 939 17732 183 52 5 chr15 46480557 46482199 -57012775 + L1_Mur1 LINE L1 1418 3134 -2752 6 939 186 43 0 0 chr15 46482199 46482222 -57012752 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 939 17732 183 52 5 chr15 46482222 46482490 -57012484 + L1_Mur1 LINE L1 3135 3450 -2436 6 939 3483 179 79 89 chr15 46482490 46483404 -57011570 + RMER17A2 LTR ERVK 2 906 0 6 939 17732 183 52 5 chr15 46483404 46485277 -57009697 + L1_Mur1 LINE L1 3451 5378 -508 6 939 4501 75 3 2 chr15 46485288 46485875 -57009099 - L1Md_F2 LINE L1 -53 6529 5942 6 939 1831 81 0 0 chr15 46485869 46486116 -57008858 + L1Md_F2 LINE L1 5699 5945 -637 6 939 30 45 0 0 chr15 46486186 46486230 -57008744 + AT_rich Low_complexity Low_complexity 1 44 0 6 939 222 128 0 0 chr15 46486242 46486281 -57008693 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 939 507 17 0 0 chr15 46486557 46486617 -57008357 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 939 745 312 80 22 chr15 46486630 46486853 -57008121 + Lx6 LINE L1 6875 7112 -348 6 939 273 98 0 0 chr15 46486853 46486894 -57008080 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 939 745 219 80 72 chr15 46486894 46487157 -57007817 + Lx6 LINE L1 7113 7201 -259 6 939 29 47 0 0 chr15 46487287 46487330 -57007644 + AT_rich Low_complexity Low_complexity 1 43 0 6 939 180 0 0 0 chr15 46487341 46487361 -57007613 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 939 369 0 0 0 chr15 46487361 46487401 -57007573 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 939 360 303 110 57 chr15 46487820 46488065 -57006909 + L1M4 LINE L1 5529 5786 -398 6 939 1128 57 0 0 chr15 46488803 46488944 -57006030 + B1_Mus2 SINE Alu 1 141 -6 6 939 24 0 0 0 chr15 46488956 46488980 -57005994 + AT_rich Low_complexity Low_complexity 1 24 0 6 939 205 309 9 9 chr15 46489007 46489118 -57005856 + (TA)n Simple_repeat Simple_repeat 2 112 0 6 939 306 0 0 0 chr15 46489195 46489229 -57005745 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 6 939 180 0 0 0 chr15 46489631 46489651 -57005323 + (TTAA)n Simple_repeat Simple_repeat 2 21 0 6 939 2922 292 84 9 chr15 46489651 46490599 -57004375 - Lx5 LINE L1 -19 7031 6013 6 939 1200 243 24 119 chr15 46490631 46490844 -57004130 + ORR1C2 LTR MaLR 1 187 -197 6 939 1113 75 0 7 chr15 46490844 46490992 -57003982 - B1_Mm SINE Alu 0 147 1 7 939 1200 243 24 119 chr15 46490992 46491198 -57003776 + ORR1C2 LTR MaLR 188 380 -4 6 939 466 277 18 12 chr15 46491433 46491601 -57003373 - Lx9 LINE L1 -319 7325 7157 7 939 418 219 89 0 chr15 46491608 46491731 -57003243 + Lx9 LINE L1 7361 7494 -150 7 939 270 319 87 54 chr15 46491764 46491913 -57003061 - ID_B1 SINE B4 -1 223 70 7 939 190 56 27 27 chr15 46492252 46492289 -57002685 + (TAA)n Simple_repeat Simple_repeat 3 39 0 7 939 182 148 158 53 chr15 46494977 46495034 -56999940 - L4 LINE RTE -1690 339 277 7 939 252 77 0 0 chr15 46496482 46496521 -56998453 + (TTGG)n Simple_repeat Simple_repeat 1 39 0 7 939 1465 196 9 19 chr15 46496616 46496934 -56998040 + Lx4B LINE L1 5242 5556 -321 7 939 286 260 211 0 chr15 46496960 46497083 -56997891 - MTEb LTR MaLR -192 187 39 7 939 6569 54 16 2 chr15 46497083 46497919 -56997055 - L1Md_F2 LINE L1 0 6582 5736 7 939 4879 229 40 14 chr15 46497927 46499263 -56995711 + Lx4B LINE L1 5587 7054 -4 7 939 383 200 14 0 chr15 46499906 46500000 -56994974 - Lx2A1 LINE L1 -983 6014 5919 7 939 4109 139 14 2 chr15 46500001 46500808 -56994166 - Lx2A1 LINE L1 -1091 5917 5095 1 939 573 212 0 74 chr15 46501489 46501610 -56993364 - Lx2A1 LINE L1 -787 5099 4989 1 939 207 0 0 0 chr15 46501610 46501633 -56993341 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 939 573 212 0 74 chr15 46501633 46501659 -56993315 - Lx2A1 LINE L1 -898 4988 4963 1 939 308 209 66 22 chr15 46501657 46501794 -56993180 + Lx2A LINE L1 6019 6161 -836 3 939 377 157 0 0 chr15 46501768 46501838 -56993136 + Lx2A LINE L1 6938 7007 -1 3 939 484 331 99 59 chr15 46502777 46503149 -56991825 + RMER15 LTR ERVL 189 575 0 4 939 362 150 5 2 chr15 46503193 46503271 -56991703 - Lx2A1 LINE L1 -1170 4707 4629 1 939 182 118 29 0 chr15 46503276 46503310 -56991664 + (TTTC)n Simple_repeat Simple_repeat 3 37 0 5 939 1600 219 125 1 chr15 46503360 46503580 -56991394 - L1_Mur3 LINE L1 -4431 1449 1207 6 939 321 26 0 0 chr15 46503580 46503618 -56991356 + (TC)n Simple_repeat Simple_repeat 2 39 0 7 939 1600 302 123 64 chr15 46503618 46503833 -56991141 - L1_Mur3 LINE L1 -6501 1227 995 6 939 1290 206 10 190 chr15 46503833 46504318 -56990656 + RMER10B LTR ERVL 1 398 0 8 939 1600 302 123 64 chr15 46504318 46504421 -56990553 - L1_Mur3 LINE L1 -6734 994 892 6 939 210 71 0 0 chr15 46504421 46504449 -56990525 + (TTA)n Simple_repeat Simple_repeat 2 29 0 9 939 1600 303 111 55 chr15 46504449 46505383 -56989591 - L1_Mur3 LINE L1 -6837 891 23 6 939 240 341 0 83 chr15 46505411 46505507 -56989467 - RSINE1 SINE B4 -7 158 71 1 939 22 56 0 0 chr15 46505707 46505743 -56989231 + AT_rich Low_complexity Low_complexity 1 36 0 1 939 315 152 0 0 chr15 46506054 46506133 -56988841 + A-rich Low_complexity Low_complexity 1 79 0 1 939 21 57 0 0 chr15 46506176 46506211 -56988763 + AT_rich Low_complexity Low_complexity 1 35 0 1 939 262 291 42 164 chr15 46506485 46506723 -56988251 + RLTR15 LTR ERVK 70 278 -81 1 939 411 317 62 7 chr15 46506844 46506990 -56987984 + Lx8 LINE L1 6548 6701 -772 1 939 410 275 103 27 chr15 46507014 46507160 -56987814 - RMER15 LTR ERVL -24 551 395 1 939 360 283 102 88 chr15 46507215 46507420 -56987554 - RMER15 LTR ERVL -341 234 27 1 939 1707 126 44 4 chr15 46507544 46507814 -56987160 + Lx2 LINE L1 6710 6990 -7 1 939 801 308 64 18 chr15 46507852 46508242 -56986732 + Lx8 LINE L1 6777 7184 -289 1 939 21030 188 48 14 chr15 46509399 46510199 -56984775 + Lx2A1 LINE L1 782 1590 -4296 1 939 438 20 0 0 chr15 46510199 46510250 -56984724 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 939 21030 177 34 18 chr15 46510250 46515553 -56979421 + Lx2A1 LINE L1 1591 6998 -10 1 939 212 0 36 0 chr15 46515553 46515581 -56979393 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 2 939 2332 48 86 0 chr15 46515581 46515895 -56979079 - IAPEY_LTR LTR ERVK -2 383 43 2 939 206 77 51 0 chr15 46515954 46515993 -56978981 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 2 939 1062 106 0 0 chr15 46516779 46516920 -56978054 + B1_Mus2 SINE Alu 1 141 -6 2 939 426 378 45 18 chr15 46518884 46519215 -56975759 + Lx8 LINE L1 6928 7267 -206 2 939 22 35 0 0 chr15 46519353 46519382 -56975592 + AT_rich Low_complexity Low_complexity 1 29 0 2 939 5693 116 18 3 chr15 46519382 46520230 -56974744 - Lx3_Mus LINE L1 0 7009 6150 2 939 997 199 13 9 chr15 46520230 46520463 -56974511 + Lx5 LINE L1 2542 2775 -3102 2 939 1404 228 89 0 chr15 46520508 46520937 -56974037 - L1_Mur3 LINE L1 -926 4954 4488 2 939 396 0 0 0 chr15 46520964 46521008 -56973966 + (GA)n Simple_repeat Simple_repeat 1 44 0 2 939 1135 173 0 0 chr15 46521079 46521270 -56973704 + RMER6C LTR ERVK 500 690 0 3 939 3274 294 34 54 chr15 46521270 46523411 -56971563 + Lx5 LINE L1 4951 7043 -7 2 939 386 20 20 0 chr15 46523459 46523510 -56971464 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 939 328 256 121 34 chr15 46523899 46524105 -56970869 - Lx7 LINE L1 0 7696 7473 3 939 427 176 154 0 chr15 46525042 46525133 -56969841 + RLTR23 LTR ERV1 1 105 -325 3 939 216 0 0 0 chr15 46525141 46525165 -56969809 + (TAA)n Simple_repeat Simple_repeat 1 24 0 3 939 1313 180 16 45 chr15 46525198 46525442 -56969532 + RLTR23 LTR ERV1 194 430 0 3 939 23 0 0 0 chr15 46525702 46525725 -56969249 + AT_rich Low_complexity Low_complexity 1 23 0 3 939 216 110 71 35 chr15 46526348 46526433 -56968541 + (CAAAC)n Simple_repeat Simple_repeat 2 89 0 3 939 253 111 0 0 chr15 46526480 46526516 -56968458 - U2 snRNA snRNA -140 48 13 3 939 2995 247 69 93 chr15 46526516 46526802 -56968172 + Lx6 LINE L1 4330 4632 -1248 3 939 198 0 0 0 chr15 46526802 46526824 -56968150 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 939 2995 247 69 93 chr15 46526824 46527147 -56967827 + Lx6 LINE L1 4633 4853 -1027 3 939 270 0 0 0 chr15 46527147 46527177 -56967797 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 4 939 2995 247 69 93 chr15 46527177 46527936 -56967038 + Lx6 LINE L1 4854 5665 -215 3 939 465 317 33 0 chr15 46527943 46528126 -56966848 + Lx6 LINE L1 6035 6223 -1237 3 939 545 202 67 8 chr15 46528127 46528247 -56966727 - RMER10B LTR ERVL 0 398 272 4 939 2433 233 36 27 chr15 46528294 46528884 -56966090 + RLTR22_Mur LTR ERVK 1167 1761 -87 4 939 1660 142 48 24 chr15 46529615 46529904 -56965070 + Lx3A LINE L1 6684 6979 -2 4 939 180 176 0 0 chr15 46530181 46530215 -56964759 + A-rich Low_complexity Low_complexity 4 37 0 4 940 21 0 0 0 chr15 46531178 46531199 -56963775 + AT_rich Low_complexity Low_complexity 1 21 0 4 940 21 0 0 0 chr15 46534568 46534589 -56960385 + AT_rich Low_complexity Low_complexity 1 21 0 4 940 486 49 0 0 chr15 46534818 46534879 -56960095 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 940 275 328 120 92 chr15 46535220 46535536 -56959438 + MT2A LTR ERVL 209 533 0 4 940 1147 272 3 50 chr15 46536272 46536590 -56958384 + Lx6 LINE L1 6982 7284 -176 4 940 23 68 0 0 chr15 46537187 46537231 -56957743 + AT_rich Low_complexity Low_complexity 1 44 0 5 940 299 214 83 0 chr15 46537308 46537392 -56957582 - Lx9 LINE L1 -14 7630 7540 5 940 201 39 0 0 chr15 46537392 46537418 -56957556 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 5 940 1713 236 78 12 chr15 46537444 46537856 -56957118 - RLTR17 LTR ERVK 0 692 254 5 940 1920 108 31 37 chr15 46537858 46538184 -56956790 + IAPLTR2b LTR ERVK 3 326 -1 5 940 14435 122 47 26 chr15 46538184 46540598 -56954376 + IAPEz-int LTR ERVK 24 2665 -3816 5 940 18439 61 6 34 chr15 46540594 46543080 -56951894 + IAPEz-int LTR ERVK 4067 6481 0 5 940 2067 77 30 20 chr15 46543080 46543384 -56951590 + IAPLTR2b LTR ERVK 1 307 -20 5 940 1449 184 8 12 chr15 46543404 46543663 -56951311 - RLTR17 LTR ERVK -434 258 1 5 940 421 260 62 62 chr15 46543735 46543928 -56951046 - Lx9 LINE L1 -204 7440 7248 5 940 25 0 0 0 chr15 46544092 46544117 -56950857 + AT_rich Low_complexity Low_complexity 1 25 0 5 940 1042 124 0 0 chr15 46544127 46544272 -56950702 - B1_Mm SINE Alu -2 145 1 5 940 243 0 0 0 chr15 46544516 46544543 -56950431 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 940 22 99 0 0 chr15 46544780 46544851 -56950123 + AT_rich Low_complexity Low_complexity 1 71 0 5 940 22 56 0 0 chr15 46544994 46545030 -56949944 + AT_rich Low_complexity Low_complexity 1 36 0 5 940 293 309 107 38 chr15 46545083 46545214 -56949760 + B1_Mur1 SINE Alu 3 142 -7 6 940 36 23 0 0 chr15 46545241 46545284 -56949690 + AT_rich Low_complexity Low_complexity 1 43 0 6 940 380 371 22 37 chr15 46545363 46545685 -56949289 + Lx8 LINE L1 6955 7271 -202 6 940 23 0 0 0 chr15 46545842 46545865 -56949109 + AT_rich Low_complexity Low_complexity 1 23 0 6 940 8845 68 0 0 chr15 46545971 46547106 -56947868 + L1Md_F2 LINE L1 4450 5584 -299 6 940 7669 59 0 45 chr15 46547108 46548014 -56946960 + L1Md_F2 LINE L1 5587 6447 -135 6 940 1144 56 0 0 chr15 46548014 46548157 -56946817 - B1_Mus2 SINE Alu 0 147 5 6 940 7669 59 0 45 chr15 46548157 46548292 -56946682 + L1Md_F2 LINE L1 6448 6581 -1 6 940 462 65 0 0 chr15 46549281 46549343 -56945631 + (TA)n Simple_repeat Simple_repeat 2 63 0 6 940 4703 148 97 8 chr15 46549818 46550698 -56944276 + RMER17B LTR ERVK 1 958 0 6 940 302 316 58 14 chr15 46550869 46551007 -56943967 + Lx8 LINE L1 6880 7023 -450 6 940 327 65 0 0 chr15 46551027 46551073 -56943901 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 940 23 33 0 0 chr15 46551326 46551356 -56943618 + AT_rich Low_complexity Low_complexity 1 30 0 7 940 23 33 0 0 chr15 46552210 46552240 -56942734 + AT_rich Low_complexity Low_complexity 1 30 0 7 940 5701 61 0 0 chr15 46552431 46553217 -56941757 + L1Md_F2 LINE L1 5512 6297 -285 7 940 1598 279 130 21 chr15 46553213 46553252 -56941722 + Lx6 LINE L1 6701 6738 -722 7 940 582 28 0 0 chr15 46553252 46553324 -56941650 + (CATA)n Simple_repeat Simple_repeat 2 73 0 7 940 1598 279 130 21 chr15 46553324 46553799 -56941175 + Lx6 LINE L1 6739 7272 -188 7 940 246 32 0 0 chr15 46553799 46553830 -56941144 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 940 1598 279 130 21 chr15 46553830 46553991 -56940983 + Lx6 LINE L1 7273 7450 -10 7 940 301 179 0 0 chr15 46554004 46554060 -56940914 + Lx3B LINE L1 6915 6970 -3 7 940 1836 144 27 12 chr15 46554093 46554424 -56940550 + ORR1A1 LTR MaLR 11 346 0 7 940 23 54 0 0 chr15 46554895 46554932 -56940042 + AT_rich Low_complexity Low_complexity 1 37 0 7 940 222 105 0 0 chr15 46555751 46555789 -56939185 + (TTTAG)n Simple_repeat Simple_repeat 3 40 0 7 940 284 231 12 36 chr15 46555798 46555858 -56939116 - B1_Mur4 SINE Alu -83 66 3 8 940 255 61 0 0 chr15 46555872 46555905 -56939069 + (TG)n Simple_repeat Simple_repeat 2 34 0 8 940 429 20 0 0 chr15 46555917 46555967 -56939007 + (GA)n Simple_repeat Simple_repeat 2 51 0 8 940 484 243 30 38 chr15 46555968 46556090 -56938884 - B3 SINE B2 -68 125 4 8 940 410 328 0 0 chr15 46556531 46556665 -56938309 - Lx6 LINE L1 -1 7459 7326 8 940 457 281 54 78 chr15 46556667 46556833 -56938141 + MT2B LTR ERVL 96 257 -344 8 940 1010 76 0 0 chr15 46556745 46556877 -56938097 + B1_Mus1 SINE Alu 16 147 -1 8 940 4044 285 40 65 chr15 46556892 46557641 -56937333 - Lx6 LINE L1 -311 7149 6429 8 940 2878 143 14 36 chr15 46557641 46558134 -56936840 - Lx LINE L1 -12 6642 6161 8 940 4044 251 65 76 chr15 46558134 46560028 -56934946 - Lx6 LINE L1 -1032 6428 4639 8 940 582 54 0 0 chr15 46560028 46560102 -56934872 + (TC)n Simple_repeat Simple_repeat 2 75 0 8 940 1937 139 71 0 chr15 46560729 46561053 -56933921 - Lx LINE L1 -3 6651 6305 8 940 265 56 0 0 chr15 46561059 46561095 -56933879 + Lx LINE L1 6270 6305 -349 8 940 23 0 0 0 chr15 46561130 46561153 -56933821 + AT_rich Low_complexity Low_complexity 1 23 0 9 940 8068 150 15 2 chr15 46561155 46562554 -56932420 - Lx3B LINE L1 -4 6969 5552 9 940 2574 126 7 0 chr15 46562553 46562966 -56932008 + L1_Mur1 LINE L1 4200 4615 -1271 9 940 183 186 0 0 chr15 46563221 46563264 -56931710 + (TG)n Simple_repeat Simple_repeat 1 43 0 9 940 22 56 0 0 chr15 46564005 46564041 -56930933 + AT_rich Low_complexity Low_complexity 1 36 0 9 940 434 298 75 28 chr15 46564605 46564819 -56930155 + Lx8 LINE L1 6781 7004 -469 9 940 1866 154 9 36 chr15 46564802 46564843 -56930131 + Lx3A LINE L1 5566 5595 -291 9 940 4917 155 30 26 chr15 46564843 46565741 -56929233 - RMER17A2 LTR ERVK -4 902 1 9 940 5749 178 44 132 chr15 46565741 46566052 -56928922 + Lx3A LINE L1 5593 5906 -1075 9 940 306 0 0 0 chr15 46566052 46566086 -56928888 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 9 940 5749 178 44 132 chr15 46566086 46566437 -56928537 + Lx3A LINE L1 5907 6302 -679 9 940 1109 76 28 40 chr15 46566437 46566580 -56928394 + B2_Mm1t SINE B2 19 160 -33 9 940 207 0 0 0 chr15 46566580 46566603 -56928371 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 1 940 1109 76 28 40 chr15 46566603 46566636 -56928338 + B2_Mm1t SINE B2 161 193 0 1 940 5749 178 44 132 chr15 46566636 46567306 -56927668 + Lx3A LINE L1 6303 6969 -12 9 940 195 114 0 0 chr15 46567309 46567344 -56927630 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 940 594 0 0 0 chr15 46567347 46567413 -56927561 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 1 940 678 290 149 28 chr15 46567525 46567565 -56927409 + MTD LTR MaLR 47 89 -330 1 940 2450 171 55 127 chr15 46567565 46568308 -56926666 + RMER6C LTR ERVK 1 690 0 1 940 678 290 149 28 chr15 46568308 46568590 -56926384 + MTD LTR MaLR 90 408 -11 1 940 8319 71 4 1 chr15 46568747 46570525 -56924449 - L1Md_F2 LINE L1 -12 6570 4788 1 940 800 213 17 3 chr15 46570799 46570975 -56923999 - RLTR20D LTR ERVK -348 229 5 1 940 239 279 106 13 chr15 46571231 46571511 -56923463 - L1M3 LINE L1 -748 5395 5088 1 940 31 76 0 0 chr15 46571968 46572034 -56922940 + AT_rich Low_complexity Low_complexity 1 66 0 1 940 838 176 0 18 chr15 46572621 46572841 -56922133 + CT-rich Low_complexity Low_complexity 1 216 0 1 940 209 182 0 0 chr15 46572841 46572874 -56922100 + polypyrimidine Low_complexity Low_complexity 4 36 0 1 940 3114 264 4 23 chr15 46572874 46573689 -56921285 - RMER1B Other Other -11 1055 190 1 940 225 83 0 0 chr15 46574119 46574155 -56920819 + (A)n Simple_repeat Simple_repeat 1 36 0 1 940 2405 43 3 3 chr15 46574280 46574586 -56920388 + L1Md_F2 LINE L1 6277 6582 0 1 940 49 52 0 0 chr15 46574975 46575052 -56919922 + AT_rich Low_complexity Low_complexity 1 77 0 1 940 318 364 51 0 chr15 46575568 46575763 -56919211 - B3 SINE B2 -11 205 1 1 940 22 56 0 0 chr15 46576758 46576794 -56918180 + AT_rich Low_complexity Low_complexity 1 36 0 1 940 24 32 0 0 chr15 46577088 46577119 -56917855 + AT_rich Low_complexity Low_complexity 1 31 0 1 940 539 26 5 126 chr15 46577286 46577676 -56917298 + T-rich Low_complexity Low_complexity 1 342 0 1 940 954 112 28 0 chr15 46577679 46577822 -56917152 - B1_Mus1 SINE Alu 0 148 2 1 940 21 0 0 0 chr15 46578484 46578505 -56916469 + AT_rich Low_complexity Low_complexity 1 21 0 1 940 23 33 0 0 chr15 46578722 46578752 -56916222 + AT_rich Low_complexity Low_complexity 1 30 0 1 940 24 0 0 0 chr15 46579811 46579835 -56915139 + AT_rich Low_complexity Low_complexity 1 24 0 1 940 195 49 0 68 chr15 46580723 46580767 -56914207 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 940 2188 136 69 11 chr15 46580785 46581163 -56913811 - MTB LTR MaLR 0 400 1 1 940 5631 130 53 74 chr15 46581163 46582265 -56912709 - MTB-int LTR MaLR -19 1079 1 1 940 430 97 0 16 chr15 46582265 46582328 -56912646 - MTB LTR MaLR 0 400 339 1 940 1390 123 0 5 chr15 46582336 46582548 -56912426 + L1_Mus2 LINE L1 6354 6564 -2 1 940 2253 129 23 3 chr15 46582604 46582955 -56912019 - MTB LTR MaLR -42 358 1 1 940 31 44 0 0 chr15 46583255 46583300 -56911674 + AT_rich Low_complexity Low_complexity 1 45 0 1 940 255 329 0 13 chr15 46583352 46583429 -56911545 - B4 SINE B4 0 292 217 1 940 216 0 0 0 chr15 46583433 46583457 -56911517 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 940 24 53 0 0 chr15 46585614 46585652 -56909322 + AT_rich Low_complexity Low_complexity 1 38 0 1 940 297 0 0 0 chr15 46585770 46585803 -56909171 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 940 295 301 116 11 chr15 46585967 46586247 -56908727 - L1M5 LINE L1 -410 5764 5455 1 940 382 277 15 23 chr15 46586343 46586476 -56908498 - Lx7 LINE L1 -1950 5746 5615 1 940 1569 229 22 8 chr15 46586477 46586847 -56908127 - ORR1C1 LTR MaLR -2 376 2 1 940 1360 249 29 3 chr15 46586848 46587191 -56907783 - ORR1C1-int LTR MaLR 0 1509 1158 1 940 3702 148 84 6 chr15 46587191 46587500 -56907474 + RMER17A LTR ERVK 1 355 -396 1 940 821 85 21 7 chr15 46587500 46587642 -56907332 + (TCTCC)n Simple_repeat Simple_repeat 4 147 0 1 940 3702 148 84 6 chr15 46587642 46588026 -56906948 + RMER17A LTR ERVK 356 747 -4 1 940 282 284 0 24 chr15 46588030 46588113 -56906861 - ORR1C1-int LTR MaLR -1427 82 2 1 940 1514 242 14 52 chr15 46588114 46588365 -56906609 - ORR1C1 LTR MaLR 0 378 141 1 940 403 46 0 15 chr15 46588365 46588431 -56906543 - L1Md_F2 LINE L1 0 6582 6518 1 940 1514 242 14 52 chr15 46588431 46588541 -56906433 - ORR1C1 LTR MaLR -238 140 31 1 940 1105 50 7 0 chr15 46588541 46588680 -56906294 + B1_Mus1 SINE Alu 2 141 -7 1 940 222 105 0 0 chr15 46588686 46588724 -56906250 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 1 940 242 163 0 0 chr15 46588729 46588772 -56906202 - ORR1C1 LTR MaLR -340 44 2 1 940 360 327 33 0 chr15 46588776 46588929 -56906045 - L1M2 LINE L1 -664 5648 5491 1 940 2622 271 55 12 chr15 46588950 46589794 -56905180 - Lx7 LINE L1 -6499 1229 350 1 940 27 49 0 0 chr15 46590047 46590088 -56904886 + AT_rich Low_complexity Low_complexity 1 41 0 1 940 479 232 23 23 chr15 46590204 46590355 -56904619 - Lx9 LINE L1 -9 7635 7484 1 940 1597 245 106 128 chr15 46590355 46590978 -56903996 - RMER19C LTR ERVK -2 609 1 1 940 479 232 23 23 chr15 46590978 46590998 -56903976 - Lx9 LINE L1 -161 7483 7464 1 940 260 314 34 8 chr15 46590996 46591115 -56903859 + Lx9 LINE L1 7322 7443 -201 1 940 1915 237 80 34 chr15 46591559 46592119 -56902855 - Lx2B LINE L1 -20 6980 6395 1 940 2016 221 56 14 chr15 46592110 46592611 -56902363 + Lx2B LINE L1 5877 6398 -602 1 940 22 0 0 0 chr15 46592698 46592720 -56902254 + AT_rich Low_complexity Low_complexity 1 22 0 1 940 325 91 0 0 chr15 46592733 46592777 -56902197 - HAL1-3A_ME LINE L1 -840 2018 1975 1 940 480 119 0 0 chr15 46592799 46592874 -56902100 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 940 410 0 20 0 chr15 46592874 46592924 -56902050 + (GA)n Simple_repeat Simple_repeat 1 51 0 1 940 480 119 0 0 chr15 46592924 46592932 -56902042 + (TG)n Simple_repeat Simple_repeat 2 9 0 1 940 23 33 0 0 chr15 46593028 46593058 -56901916 + AT_rich Low_complexity Low_complexity 1 30 0 1 940 200 189 0 0 chr15 46593973 46594010 -56900964 + CT-rich Low_complexity Low_complexity 2 38 0 1 940 183 242 87 43 chr15 46594278 46594347 -56900627 - MIR SINE MIR -112 150 79 1 940 208 345 0 0 chr15 46594339 46594394 -56900580 + L2c LINE L2 3105 3159 -228 1 940 282 125 0 0 chr15 46594651 46594699 -56900275 + (TTTAG)n Simple_repeat Simple_repeat 3 50 0 1 940 27 62 0 0 chr15 46595054 46595102 -56899872 + AT_rich Low_complexity Low_complexity 1 48 0 1 940 346 341 50 22 chr15 46595221 46595401 -56899573 - L1MEe LINE L1 -4445 409 225 1 940 230 301 24 0 chr15 46596670 46596753 -56898221 + Lx7 LINE L1 7595 7679 -17 1 940 213 39 0 0 chr15 46596755 46596781 -56898193 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 940 1154 69 0 0 chr15 46596781 46596925 -56898049 - B1_Mus2 SINE Alu -3 144 1 1 940 485 71 14 0 chr15 46596942 46597012 -56897962 + (GA)n Simple_repeat Simple_repeat 1 71 0 1 940 4621 144 9 39 chr15 46597146 46597568 -56897406 - Lx2 LINE L1 -747 6250 5840 1 940 3308 35 2 5 chr15 46597568 46597965 -56897009 + MTA_Mm LTR MaLR 1 396 0 1 940 4621 200 12 15 chr15 46597965 46598575 -56896399 - Lx2 LINE L1 -38 5839 5236 1 940 279 0 0 0 chr15 46598575 46598606 -56896368 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 940 4621 200 12 15 chr15 46598606 46598947 -56896027 - Lx2 LINE L1 -642 5235 4889 1 940 1299 133 31 9 chr15 46598947 46599174 -56895800 + Lx2 LINE L1 6765 6996 -1 1 940 351 323 10 10 chr15 46599380 46599477 -56895497 - B3A SINE B2 -95 103 7 1 940 21 0 0 0 chr15 46600077 46600098 -56894876 + AT_rich Low_complexity Low_complexity 1 21 0 1 940 276 30 0 0 chr15 46600462 46600495 -56894479 + (TATTG)n Simple_repeat Simple_repeat 3 35 0 1 940 1846 304 68 94 chr15 46600511 46600897 -56894077 - Lx5 LINE L1 -26 7434 7108 1 940 303 28 0 0 chr15 46600897 46600933 -56894041 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 940 1942 292 86 42 chr15 46600933 46602031 -56892943 - Lx5 LINE L1 -353 7107 5703 1 940 1391 258 30 11 chr15 46602259 46602648 -56892326 + MTC LTR MaLR 12 419 -2 1 940 548 317 107 73 chr15 46602714 46602901 -56892073 - MTD LTR MaLR 0 419 213 1 940 1178 68 0 0 chr15 46602901 46603047 -56891927 - B1_Mm SINE Alu 0 147 2 1 940 548 317 107 73 chr15 46603047 46603186 -56891788 - MTD LTR MaLR -207 212 82 1 940 501 32 0 0 chr15 46603429 46603492 -56891482 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 940 842 253 27 66 chr15 46603503 46603956 -56891018 + RLTR20D LTR ERVK 3 551 0 1 940 28192 154 21 20 chr15 46604506 46606874 -56888100 + L1_Mus2 LINE L1 352 2641 -3242 1 940 207 0 0 0 chr15 46606874 46606897 -56888077 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 940 28192 131 11 9 chr15 46606897 46608906 -56886068 + L1_Mus2 LINE L1 2642 4633 -1250 1 940 306 0 0 0 chr15 46608906 46608940 -56886034 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 940 28192 113 7 12 chr15 46608940 46610873 -56884101 + L1_Mus2 LINE L1 4634 6654 0 1 940 22 35 0 0 chr15 46611027 46611056 -56883918 + AT_rich Low_complexity Low_complexity 1 29 0 1 940 225 224 15 15 chr15 46613785 46613853 -56881121 - L1MD LINE L1 -2543 3603 3536 1 940 263 202 58 35 chr15 46614317 46614404 -56880570 - Lx7 LINE L1 0 7696 7608 1 940 344 147 0 13 chr15 46614810 46614886 -56880088 - Lx2A LINE L1 -5 7003 6929 1 940 613 349 51 62 chr15 46615112 46615580 -56879394 + Lx8 LINE L1 6567 7029 -444 1 940 252 333 0 14 chr15 46616052 46616122 -56878852 + MamSINE1 SINE tRNA 22 90 -200 1 940 540 0 0 0 chr15 46616893 46616953 -56878021 + (TTTTG)n Simple_repeat Simple_repeat 3 62 0 1 940 953 264 45 30 chr15 46617379 46617711 -56877263 + L1_Mur3 LINE L1 794 1130 -6598 1 940 37259 48 2 7 chr15 46617703 46623679 -56871295 - L1Md_F2 LINE L1 -13 6569 631 1 940 523 184 69 21 chr15 46623673 46623817 -56871157 + L1_Mur3 LINE L1 1096 1246 -6482 1 940 7157 215 39 61 chr15 46623832 46624504 -56870470 + L1_Mur3 LINE L1 1356 2038 -3842 1 940 732 261 89 37 chr15 46624504 46624854 -56870120 + RLTR9A LTR ERVK 1 368 0 1 940 7157 215 39 61 chr15 46624854 46624902 -56870072 + L1_Mur3 LINE L1 2039 2078 -3802 1 940 228 86 0 0 chr15 46624902 46624937 -56870037 + (CCA)n Simple_repeat Simple_repeat 1 35 0 1 940 7157 215 39 61 chr15 46624937 46626398 -56868576 + L1_Mur3 LINE L1 2079 3480 -2400 1 940 182 37 0 36 chr15 46626398 46626426 -56868548 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1 940 7157 215 39 61 chr15 46626426 46626646 -56868328 + L1_Mur3 LINE L1 3481 3706 -2174 1 940 2813 71 31 0 chr15 46626646 46627027 -56867947 + L1Md_F3 LINE L1 6189 6581 -3 1 940 422 228 13 45 chr15 46627027 46627183 -56867791 + T-rich Low_complexity Low_complexity 3 153 0 1 940 484 228 60 10 chr15 46627308 46627467 -56867507 + L1_Mur3 LINE L1 5240 5427 -453 1 940 3399 146 19 10 chr15 46627602 46627768 -56867206 + Lx3A LINE L1 5742 5908 -1073 1 940 987 0 74 0 chr15 46627768 46627931 -56867043 + (CAAAA)n Simple_repeat Simple_repeat 3 177 0 1 940 3399 146 19 10 chr15 46627931 46628358 -56866616 + Lx3A LINE L1 5909 6339 -642 1 940 360 0 0 0 chr15 46628421 46628461 -56866513 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 940 477 0 0 0 chr15 46628461 46628514 -56866460 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 1 940 25 65 0 0 chr15 46628549 46628595 -56866379 + AT_rich Low_complexity Low_complexity 1 46 0 1 940 631 260 142 20 chr15 46628597 46628899 -56866075 - L1_Mur3 LINE L1 -138 5742 5404 1 940 5387 112 1 5 chr15 46628897 46629681 -56865293 - L1_Mm LINE L1 -66 5817 5037 1 940 5592 94 5 7 chr15 46629749 46630522 -56864452 + L1_Mus1 LINE L1 5796 6567 0 2 940 390 222 31 16 chr15 46630536 46630664 -56864310 - L1_Mur3 LINE L1 -466 5414 5285 1 940 30 59 0 0 chr15 46630669 46630720 -56864254 + AT_rich Low_complexity Low_complexity 1 51 0 2 940 3809 187 139 76 chr15 46630720 46630949 -56864025 - RMER6-int LTR ERVK -353 2824 2568 2 940 252 295 0 0 chr15 46630949 46631010 -56863964 - LSU-rRNA_Hsa rRNA rRNA -3198 1837 1777 2 940 3809 187 139 76 chr15 46631010 46631829 -56863145 - RMER6-int LTR ERVK -353 2567 1646 2 940 1847 182 27 81 chr15 46631829 46632236 -56862738 - RLTR41 LTR ERV1 0 446 62 2 940 7172 193 65 10 chr15 46632263 46633556 -56861418 - RMER6-int LTR ERVK -1528 1649 306 2 940 395 78 16 0 chr15 46633556 46633620 -56861354 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 940 7172 193 65 10 chr15 46633620 46633889 -56861085 - RMER6-int LTR ERVK -2872 305 3 2 940 1292 209 122 12 chr15 46633889 46634454 -56860520 - RMER6C LTR ERVK 0 690 1 2 940 343 304 34 25 chr15 46634498 46634616 -56860358 - Lx8 LINE L1 -608 6865 6747 2 940 266 365 30 60 chr15 46634666 46634783 -56860191 + Lx8 LINE L1 6964 7081 -392 2 940 3094 199 52 10 chr15 46634783 46635131 -56859843 + RMER6D LTR ERVK 1 373 -347 2 940 462 49 0 0 chr15 46635131 46635192 -56859782 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 940 3094 199 52 10 chr15 46635192 46635534 -56859440 + RMER6D LTR ERVK 374 720 0 2 940 266 365 30 60 chr15 46635534 46635617 -56859357 + Lx8 LINE L1 7082 7158 -315 2 940 873 326 46 26 chr15 46635710 46636056 -56858918 + ORR1D2 LTR MaLR 6 358 -12 2 940 27 0 0 0 chr15 46638337 46638364 -56856610 + AT_rich Low_complexity Low_complexity 1 27 0 2 940 1073 243 5 0 chr15 46638435 46638653 -56856321 - URR1B DNA MER1_type 0 225 7 2 940 21 0 0 0 chr15 46639045 46639066 -56855908 + AT_rich Low_complexity Low_complexity 1 21 0 2 940 21 0 0 0 chr15 46639162 46639183 -56855791 + AT_rich Low_complexity Low_complexity 1 21 0 2 940 3770 28 5 0 chr15 46639434 46639868 -56855106 + RLTR10C LTR ERVK 1 436 0 2 940 754 262 22 39 chr15 46640535 46640765 -56854209 + Lx6 LINE L1 7226 7451 -9 2 940 469 236 77 18 chr15 46640783 46640951 -56854023 + Lx9 LINE L1 7319 7496 -148 2 940 266 138 0 17 chr15 46640973 46641032 -56853942 + GA-rich Low_complexity Low_complexity 1 58 0 2 940 22 0 0 0 chr15 46641719 46641741 -56853233 + AT_rich Low_complexity Low_complexity 1 22 0 2 940 307 336 88 34 chr15 46642575 46642723 -56852251 + B4A SINE B4 6 161 -131 2 940 386 100 0 0 chr15 46643002 46643072 -56851902 + L1_Mus3 LINE L1 6569 6638 0 2 940 1133 308 50 50 chr15 46643719 46644136 -56850838 - MTD LTR MaLR -2 417 1 2 940 474 18 0 0 chr15 46644207 46644262 -56850712 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 2 940 225 294 130 20 chr15 46644571 46644717 -56850257 + MER63D DNA AcHobo 839 1000 -61 2 940 282 29 0 0 chr15 46645380 46645415 -56849559 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 940 434 33 0 16 chr15 46645447 46645508 -56849466 + (TTTTG)n Simple_repeat Simple_repeat 2 61 0 2 940 338 292 43 72 chr15 46645647 46645726 -56849248 - L1M2 LINE L1 -2860 3283 3206 2 940 3655 173 5 1 chr15 46645726 46646375 -56848599 - Lx LINE L1 -5 6649 5999 2 940 338 292 43 72 chr15 46646375 46646502 -56848472 - L1M2 LINE L1 -2938 3205 3084 2 940 282 262 38 28 chr15 46646517 46646529 -56848445 - Lx LINE L1 -978 6031 6021 2 940 973 120 7 0 chr15 46646529 46646671 -56848303 - B1_Mm SINE Alu -3 144 2 2 940 698 86 41 1 chr15 46646671 46646770 -56848204 - Lx LINE L1 -989 6020 5910 2 940 864 160 11 22 chr15 46646765 46646944 -56848030 - L1Md_F2 LINE L1 -480 5403 5227 2 940 33114 92 3 13 chr15 46646912 46649116 -56845858 - L1Md_F2 LINE L1 0 6582 4417 2 940 3573 100 2 19 chr15 46649116 46649636 -56845338 - L1Md_F2 LINE L1 -12 6570 6060 2 940 33114 98 16 8 chr15 46649636 46653638 -56841336 - L1Md_F2 LINE L1 -1467 4416 374 2 940 1573 172 0 3 chr15 46653637 46653923 -56841051 - L1_Mur2 LINE L1 -608 5269 4985 2 940 471 35 0 0 chr15 46653924 46653981 -56840993 + (TTTTC)n Simple_repeat Simple_repeat 3 59 0 2 940 5770 196 18 2 chr15 46653981 46655890 -56839084 - Lx LINE L1 -12 6642 4706 2 940 9102 118 60 25 chr15 46655891 46657290 -56837684 - L1VL4 LINE L1 -937 2622 1163 2 940 360 0 0 0 chr15 46657290 46657330 -56837644 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 940 9102 156 30 33 chr15 46657330 46658321 -56836653 - L1VL4 LINE L1 -2397 1162 189 2 940 993 105 7 7 chr15 46658520 46658664 -56836310 + B1_Mus2 SINE Alu 1 144 -3 2 940 233 29 29 0 chr15 46658664 46658698 -56836276 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2 940 279 218 0 0 chr15 46659479 46659534 -56835440 - MIR SINE MIR -4 258 204 2 940 3429 18 2 10 chr15 46659693 46660092 -56834882 - MTA_Mm LTR MaLR 0 396 1 2 940 23 33 0 0 chr15 46660249 46660279 -56834695 + AT_rich Low_complexity Low_complexity 1 30 0 2 117 8309 239 39 25 chr15 46660284 46662878 -56832096 + Lx LINE L1 3494 6124 -1336 2 941 6635 163 6 6 chr15 46662860 46664650 -56830324 + Lx LINE L1 4858 6647 -7 2 941 1603 187 0 10 chr15 46664663 46664955 -56830019 - ORR1A1 LTR MaLR -57 289 1 2 941 21 0 0 0 chr15 46665195 46665216 -56829758 + AT_rich Low_complexity Low_complexity 1 21 0 2 941 1220 34 0 0 chr15 46665380 46665526 -56829448 + B1_Mus2 SINE Alu 2 147 0 2 941 625 246 35 0 chr15 46666475 46666617 -56828357 + B1_Mur4 SINE Alu 3 149 -1 2 941 497 370 43 0 chr15 46669048 46669259 -56825715 - ID_B1 SINE B4 -4 220 1 2 941 2646 177 92 24 chr15 46669271 46669522 -56825452 - Lx4A LINE L1 -1 7057 6766 2 941 504 48 0 0 chr15 46669522 46669585 -56825389 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 941 2646 177 92 24 chr15 46669585 46669906 -56825068 - Lx4A LINE L1 -293 6765 6447 2 941 883 311 78 52 chr15 46670246 46670295 -56824679 - MT2A LTR ERVL -3 530 477 2 941 1325 205 149 3 chr15 46670295 46670623 -56824351 + ORR1C1 LTR MaLR 3 378 0 2 941 883 311 78 52 chr15 46670623 46671072 -56823902 - MT2A LTR ERVL -57 476 19 2 941 659 160 0 6 chr15 46671146 46671303 -56823671 + GA-rich Low_complexity Low_complexity 1 156 0 2 941 400 269 89 40 chr15 46671714 46671838 -56823136 + B3 SINE B2 2 131 -85 2 941 699 268 30 13 chr15 46672448 46672679 -56822295 + L1MA5 LINE L1 5602 5836 -464 2 941 6000 57 1 4 chr15 46672935 46673705 -56821269 + L1Md_F2 LINE L1 5805 6572 -10 2 941 270 74 56 0 chr15 46673775 46673829 -56821145 + (TA)n Simple_repeat Simple_repeat 1 57 0 2 941 406 77 0 0 chr15 46673994 46674046 -56820928 - Lx LINE L1 -978 5658 5607 2 941 1450 145 16 4 chr15 46674038 46674288 -56820686 + Lx LINE L1 5656 5908 -1089 2 941 2587 191 75 4 chr15 46674286 46674807 -56820167 + Lx LINE L1 6097 6654 0 2 941 756 350 64 14 chr15 46675001 46675424 -56819550 - Lx8 LINE L1 -11 7462 7019 2 941 414 0 0 0 chr15 46676793 46676839 -56818135 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 941 778 243 33 37 chr15 46677254 46677307 -56817667 + Lx6 LINE L1 6506 6552 -908 2 941 2271 192 107 37 chr15 46677307 46677952 -56817022 - RMER6C LTR ERVK 0 690 1 2 941 778 243 33 37 chr15 46677952 46678112 -56816862 + Lx6 LINE L1 6553 6718 -742 2 941 364 235 62 0 chr15 46678182 46678263 -56816711 - ID_B1 SINE B4 0 224 139 2 941 1362 128 64 0 chr15 46678264 46678498 -56816476 + L1_Mus3 LINE L1 6383 6631 -7 2 941 2578 269 46 24 chr15 46678527 46679229 -56815745 + Lx6 LINE L1 6744 7460 0 2 941 225 159 0 0 chr15 46680147 46680191 -56814783 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 941 242 343 42 21 chr15 46680389 46680532 -56814442 - Lx8 LINE L1 -364 7109 6964 2 941 216 206 65 11 chr15 46680534 46680627 -56814347 + (TA)n Simple_repeat Simple_repeat 2 99 0 2 941 207 194 48 16 chr15 46680791 46680854 -56814120 + (CATATA)n Simple_repeat Simple_repeat 1 65 0 2 941 399 320 72 63 chr15 46681505 46681838 -56813136 + Lx8 LINE L1 6168 6503 -970 2 941 303 148 0 0 chr15 46682065 46682119 -56812855 - Lx9 LINE L1 -160 7484 7431 2 941 258 81 0 0 chr15 46682255 46682292 -56812682 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 941 18991 173 60 12 chr15 46682487 46685297 -56809677 - Lx2 LINE L1 0 6997 3961 2 941 2418 122 48 43 chr15 46685297 46685715 -56809259 + RLTR9B2 LTR ERVK 1 420 0 2 941 18991 201 64 16 chr15 46685715 46686856 -56808118 - Lx2 LINE L1 -1926 3960 2814 2 941 207 0 0 0 chr15 46686856 46686879 -56808095 + (TTG)n Simple_repeat Simple_repeat 1 23 0 2 941 18991 194 69 18 chr15 46686879 46688855 -56806119 - Lx2 LINE L1 -3073 2813 786 2 941 198 0 0 0 chr15 46689248 46689270 -56805704 + (TTTTA)n Simple_repeat Simple_repeat 1 22 0 2 941 261 0 0 0 chr15 46689521 46689550 -56805424 + (TA)n Simple_repeat Simple_repeat 2 30 0 2 941 297 0 0 0 chr15 46689550 46689582 -56805392 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 941 377 254 148 0 chr15 46689583 46689705 -56805269 - Lx7 LINE L1 -18 7678 7539 2 941 508 272 36 22 chr15 46689707 46689846 -56805128 + Lx6 LINE L1 7252 7392 -68 2 941 1927 112 3 42 chr15 46689846 46690154 -56804820 + RMER2 LTR ERV1 272 567 0 2 941 274 331 53 8 chr15 46691471 46691602 -56803372 + RLTR6-int LTR ERV1 1554 1690 -6088 2 941 462 362 50 0 chr15 46692393 46692611 -56802363 + RLTR4_MM-int LTR ERV1 4006 4234 -3367 2 941 1354 333 11 0 chr15 46692914 46693367 -56801607 + MuRRS4-int LTR ERV1 3557 4014 -1049 2 941 979 116 13 25 chr15 46693802 46693961 -56801013 + RMER2 LTR ERV1 1 157 -410 2 941 8843 159 6 14 chr15 46693961 46695588 -56799386 - L1_Mur1 LINE L1 -1261 4625 3011 2 941 423 0 0 0 chr15 46695827 46695874 -56799100 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 2 941 2418 65 68 12 chr15 46695932 46696258 -56798716 + ORR1A1 LTR MaLR 3 346 0 2 941 21 0 0 0 chr15 46696703 46696724 -56798250 + AT_rich Low_complexity Low_complexity 1 21 0 2 941 22 0 0 0 chr15 46696792 46696814 -56798160 + AT_rich Low_complexity Low_complexity 1 22 0 2 941 7187 137 53 5 chr15 46696829 46698482 -56796492 - Lx3B LINE L1 -4 6969 5231 2 941 528 121 0 0 chr15 46698492 46698583 -56796391 + (TA)n Simple_repeat Simple_repeat 1 91 0 2 941 290 186 1 81 chr15 46698583 46698666 -56796308 - Lx3B LINE L1 -638 5248 5163 2 941 4620 127 44 0 chr15 46698993 46700105 -56794869 + L1Md_F LINE L1 421 1590 -4293 2 941 38361 7 0 1 chr15 46700106 46705870 -56789104 + L1Md_A LINE L1 1 5586 -297 2 941 8985 4 0 0 chr15 46705870 46706866 -56788108 + L1Md_A LINE L1 5587 6582 0 2 941 18156 82 3 0 chr15 46706897 46709446 -56785528 + L1_Mm LINE L1 1572 4127 -1756 2 941 959 266 27 12 chr15 46710012 46710270 -56784704 - Lx5 LINE L1 -566 6894 6460 2 941 629 386 12 24 chr15 46710266 46710595 -56784379 + Lx6 LINE L1 7090 7414 -46 2 941 240 303 0 90 chr15 46711525 46711659 -56783315 + Lx7 LINE L1 7563 7684 -12 2 941 769 233 0 0 chr15 46711660 46711806 -56783168 - B1_Mus2 SINE Alu -1 146 1 2 941 341 300 33 20 chr15 46712567 46712720 -56782254 + Lx6 LINE L1 7275 7429 -31 2 941 213 39 0 0 chr15 46712723 46712749 -56782225 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 941 475 263 25 50 chr15 46712944 46713184 -56781790 - Lx7 LINE L1 0 7696 7463 3 941 519 92 0 0 chr15 46713185 46713272 -56781702 + (CAAAA)n Simple_repeat Simple_repeat 1 87 0 3 941 5505 186 40 18 chr15 46715423 46716098 -56778876 + L1_Mur1 LINE L1 866 1558 -4328 3 941 234 0 0 0 chr15 46716098 46716124 -56778850 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 941 5505 183 56 32 chr15 46716124 46717060 -56777914 + L1_Mur1 LINE L1 1559 2518 -3368 3 941 1282 220 40 23 chr15 46717063 46717364 -56777610 - RLTR20B2 LTR ERVK 0 560 255 3 941 1766 238 150 91 chr15 46717364 46718299 -56776675 + RMER17B LTR ERVK 1 896 -12 3 941 1083 249 13 4 chr15 46718321 46718551 -56776423 - RLTR20B2 LTR ERVK -328 232 1 3 941 6422 175 29 6 chr15 46718631 46719953 -56775021 - MYSERV16_I-int LTR ERVK -115 2211 860 3 941 35450 4 0 0 chr15 46719959 46725529 -56769445 + L1Md_A LINE L1 18 5586 -297 3 941 9010 4 0 0 chr15 46725529 46726525 -56768449 + L1Md_A LINE L1 5587 6582 0 3 941 1182 237 65 60 chr15 46726529 46726915 -56768059 - MYSERV16_I-int LTR ERVK -1470 856 469 3 941 226 0 29 29 chr15 46726922 46726957 -56768017 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 941 446 164 5 0 chr15 46726957 46727045 -56767929 - B1_Mur4 SINE Alu -9 141 51 3 941 1503 189 93 62 chr15 46727045 46727518 -56767456 - MYSERV16_I-int LTR ERVK -1868 458 1 3 941 1799 223 62 30 chr15 46727827 46728293 -56766681 + Lx2B LINE L1 6513 6993 -7 3 941 189 0 0 0 chr15 46728834 46728855 -56766119 + (A)n Simple_repeat Simple_repeat 1 21 0 3 941 2473 115 5 45 chr15 46729333 46729734 -56765240 + L1_Mus2 LINE L1 6176 6560 -6 3 941 441 0 0 0 chr15 46729734 46729783 -56765191 + (GA)n Simple_repeat Simple_repeat 1 49 0 3 941 31380 86 9 3 chr15 46729811 46734957 -56760017 + L1Md_T LINE L1 1239 6425 -157 3 941 2081 98 3 69 chr15 46734957 46735306 -56759668 + IAPLTR1a_Mm LTR ERVK 1 326 -11 3 941 4758 42 29 36 chr15 46735307 46735974 -56759000 + IAPEz-int LTR ERVK 1 662 -5819 3 941 396 81 0 31 chr15 46735974 46736038 -56758936 + IAPEz-int LTR ERVK 1359 1420 -5061 3 941 1719 119 4 4 chr15 46736026 46736288 -56758686 + IAPEz-int LTR ERVK 2236 2497 -5183 3 941 871 81 24 0 chr15 46736285 46736408 -56758566 + IAPEz-int LTR ERVK 4785 4910 -2770 3 941 446 66 0 0 chr15 46736408 46736469 -56758505 + IAPEz-int LTR ERVK 3525 3585 -2896 3 941 19715 21 6 0 chr15 46736461 46738812 -56756162 + IAPEz-int LTR ERVK 4117 6481 0 3 941 2081 98 3 69 chr15 46738812 46739161 -56755813 + IAPLTR1a_Mm LTR ERVK 1 326 -11 3 941 872 151 0 12 chr15 46739169 46739330 -56755644 + L1Md_T LINE L1 6421 6579 -3 3 941 23 54 0 0 chr15 46739950 46739987 -56754987 + AT_rich Low_complexity Low_complexity 1 37 0 3 941 29 28 0 0 chr15 46740236 46740272 -56754702 + AT_rich Low_complexity Low_complexity 1 36 0 3 941 598 295 127 39 chr15 46740384 46740716 -56754258 + MLT1B LTR MaLR 16 376 -14 3 941 727 350 25 8 chr15 46742980 46743216 -56751758 - B4A SINE B4 -16 276 37 3 941 1830 166 6 24 chr15 46743216 46743549 -56751425 + ORR1A2 LTR MaLR 1 327 0 3 941 1700 197 2 140 chr15 46743551 46744008 -56750966 + ORR1A2-int LTR MaLR 3 399 -971 3 941 2277 271 58 102 chr15 46744011 46744671 -56750303 - Lx LINE L1 0 6997 6342 3 941 1079 84 0 25 chr15 46744671 46744829 -56750145 + L1_Mus1 LINE L1 6412 6565 -2 3 941 10421 170 42 121 chr15 46744829 46748405 -56746569 - Lx LINE L1 -656 6341 3065 3 941 3837 207 28 20 chr15 46748406 46749628 -56745346 + ORR1A2-int LTR MaLR 375 1767 -196 3 941 3546 172 117 24 chr15 46749632 46750466 -56744508 + L1_Mur1 LINE L1 3362 4277 -1600 3 941 7249 21 1 0 chr15 46750466 46751302 -56743672 + L1Md_A LINE L1 5746 6582 0 3 941 3546 174 1 15 chr15 46751302 46751632 -56743342 + L1_Mur1 LINE L1 4278 4599 -1278 3 941 5087 205 24 23 chr15 46752302 46752580 -56742394 + L1_Mur1 LINE L1 4606 4871 -1015 3 941 260 0 57 0 chr15 46752580 46752615 -56742359 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 941 5087 205 24 23 chr15 46752615 46753594 -56741380 + L1_Mur1 LINE L1 4872 5864 -22 3 941 655 243 152 96 chr15 46753606 46753888 -56741086 + RLTR10A LTR ERVK 114 411 0 3 941 4627 165 32 8 chr15 46753888 46754775 -56740199 + Lx2 LINE L1 5834 6741 -256 3 941 5573 41 0 5 chr15 46754775 46755522 -56739452 - L1Md_F2 LINE L1 -661 5921 5179 3 941 4725 98 3 18 chr15 46755522 46756198 -56738776 + L1Md_F2 LINE L1 5905 6570 -12 3 941 1500 177 18 4 chr15 46756193 46756465 -56738509 + Lx2 LINE L1 6722 6997 0 3 941 354 80 0 0 chr15 46757303 46757353 -56737621 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 941 273 57 0 0 chr15 46757353 46757388 -56737586 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 941 484 346 0 0 chr15 46757821 46757957 -56737017 - Lx5 LINE L1 -121 6929 6794 3 941 3968 179 153 29 chr15 46757974 46758287 -56736687 + RLTR25A LTR ERVK 1 321 -782 3 941 393 75 0 0 chr15 46758287 46758340 -56736634 + (TATG)n Simple_repeat Simple_repeat 3 55 0 3 941 3968 179 153 29 chr15 46758340 46758814 -56736160 + RLTR25A LTR ERVK 322 887 -216 3 941 1068 131 0 0 chr15 46758814 46758989 -56735985 + (CA)n Simple_repeat Simple_repeat 2 176 0 3 941 3968 179 153 29 chr15 46758989 46759121 -56735853 + RLTR25A LTR ERVK 888 1034 -69 3 941 4262 179 94 96 chr15 46759092 46760235 -56734739 - ORR1A2-int LTR MaLR -652 1140 1 3 941 1057 157 25 25 chr15 46760235 46760431 -56734543 - ORR1A2 LTR MaLR 0 327 132 3 941 621 355 42 35 chr15 46760807 46761971 -56733003 - MMERGLN-int LTR ERV1 -3259 4519 3251 3 941 333 346 41 28 chr15 46762041 46762404 -56732570 - MMERGLN-int LTR ERV1 -5940 1616 1249 3 941 2720 106 57 75 chr15 46763006 46763497 -56731477 - RLTR45 LTR ERVK 0 482 1 3 941 441 0 0 0 chr15 46763838 46763887 -56731087 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 3 941 462 308 75 69 chr15 46763957 46764306 -56730668 - RLTR23 LTR ERV1 0 430 80 3 941 337 177 127 204 chr15 46764298 46764440 -56730534 - RLTR23 LTR ERV1 -292 138 8 3 941 534 264 7 13 chr15 46764538 46764688 -56730286 - RMER15-int LTR ERVL -250 4749 4601 3 941 1323 220 64 14 chr15 46764688 46765068 -56729906 + RLTR28 LTR ERVL 1 426 -98 3 941 2020 263 48 19 chr15 46765089 46765678 -56729296 - RMER15-int LTR ERVL -1730 3269 2664 3 941 1071 15 0 0 chr15 46765755 46765886 -56729088 + L1Md_F2 LINE L1 6440 6570 -12 3 941 7862 287 26 26 chr15 46766009 46767824 -56727150 - RMER15-int LTR ERVL -2429 2570 755 3 941 2401 209 17 12 chr15 46767824 46768343 -56726631 + RLTR28 LTR ERVL 1 522 -2 3 941 7862 287 26 26 chr15 46768343 46769096 -56725878 - RMER15-int LTR ERVL -4245 754 1 3 941 2056 221 35 43 chr15 46769099 46769676 -56725298 - RMER15 LTR ERVL -3 572 1 3 941 369 299 94 41 chr15 46771799 46771970 -56723004 - Lx5 LINE L1 -9 7041 6862 3 941 23 33 0 0 chr15 46772101 46772131 -56722843 + AT_rich Low_complexity Low_complexity 1 30 0 3 941 223 119 16 78 chr15 46772151 46772215 -56722759 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 3 941 1942 213 73 73 chr15 46773216 46773708 -56721266 + RMER19B LTR ERVK 170 661 -241 3 941 390 315 117 6 chr15 46774453 46774616 -56720358 - MTE2b LTR MaLR -2 377 197 3 941 22 35 0 0 chr15 46775479 46775508 -56719466 + AT_rich Low_complexity Low_complexity 1 29 0 3 941 453 283 28 21 chr15 46775781 46775922 -56719052 - RLTR25B LTR ERVK 0 1028 887 3 941 243 228 18 0 chr15 46775934 46775991 -56718983 - U7 snRNA snRNA -2 61 4 3 941 855 167 57 31 chr15 46776066 46776258 -56718716 - RLTR25B LTR ERVK -221 807 611 3 941 1574 262 65 78 chr15 46776267 46777244 -56717730 + RMER13B LTR ERVK 1 899 -9 3 941 414 0 0 0 chr15 46777256 46777302 -56717672 + (TTG)n Simple_repeat Simple_repeat 3 48 0 3 941 503 208 17 115 chr15 46777310 46777484 -56717490 - Lx3C LINE L1 -7 6969 6813 3 941 2863 238 21 43 chr15 46777484 46777760 -56717214 - RLTR25A LTR ERVK -402 701 441 3 941 221 0 35 0 chr15 46777760 46777789 -56717185 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 941 2857 238 21 43 chr15 46777789 46778229 -56716745 - RLTR25A LTR ERVK -663 440 2 3 941 1064 306 16 7 chr15 46778555 46778864 -56716110 + RLTR11A2 LTR ERVK 3 314 -213 3 941 2490 206 20 4 chr15 46778916 46779463 -56715511 + L1_Mur2 LINE L1 4825 5380 -497 3 941 4429 138 16 30 chr15 46779457 46780197 -56714777 + Lx LINE L1 5901 6630 -24 3 941 543 96 0 0 chr15 46780212 46780295 -56714679 + (CA)n Simple_repeat Simple_repeat 2 84 0 3 941 272 128 115 21 chr15 46781026 46781122 -56713852 + MYSERV6-int LTR ERVK 6425 6529 -2430 3 941 440 207 0 0 chr15 46781227 46781309 -56713665 + MYSERV-int LTR ERVK 4730 4811 -550 3 941 2814 111 40 45 chr15 46781534 46781829 -56713145 + L1VL4 LINE L1 821 1109 -5548 3 941 234 0 0 0 chr15 46781829 46781855 -56713119 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 3 941 3452 121 39 49 chr15 46781855 46782110 -56712864 + L1VL4 LINE L1 1110 1368 -4509 3 941 602 164 45 108 chr15 46782110 46782267 -56712707 + B1_Mur4 SINE Alu 3 149 -1 3 941 5449 111 30 5 chr15 46782267 46783207 -56711767 + L1VL4 LINE L1 1353 2266 -1648 3 941 2945 116 35 0 chr15 46783241 46783725 -56711249 + L1VL4 LINE L1 3410 3910 -4 3 941 201 74 0 0 chr15 46783746 46783773 -56711201 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 941 237 325 50 50 chr15 46783881 46784001 -56710973 + RMER4A LTR ERVK 310 429 -37 3 941 6231 136 13 51 chr15 46784002 46785183 -56709791 + Lx LINE L1 5519 6654 0 3 941 1278 243 91 73 chr15 46785190 46785884 -56709090 + MYSERV16_I-int LTR ERVK 1051 1756 -570 3 941 878 267 74 25 chr15 46785886 46786170 -56708804 + RLTR11A LTR ERVK 1 298 -230 3 941 1261 246 138 69 chr15 46786199 46786662 -56708312 + RMER19C LTR ERVK 117 611 0 3 941 1053 205 34 64 chr15 46786662 46786900 -56708074 + RLTR11A LTR ERVK 299 528 0 3 941 1957 217 44 27 chr15 46786930 46787455 -56707519 + MYSERV-int LTR ERVK 6014 6547 -3 3 941 883 196 66 16 chr15 46787459 46787641 -56707333 + RLTR11A2 LTR ERVK 1 191 -336 3 117 18261 179 45 28 chr15 46788092 46793609 -56701365 + Lx3_Mus LINE L1 1370 6992 -17 3 942 465 19 0 0 chr15 46793610 46793664 -56701310 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 3 942 23 33 0 0 chr15 46794993 46795023 -56699951 + AT_rich Low_complexity Low_complexity 1 30 0 3 942 2657 275 51 42 chr15 46795400 46797077 -56697897 - Lx5 LINE L1 0 7058 5412 3 942 1479 228 45 3 chr15 46797078 46797412 -56697562 - RLTR15 LTR ERVK -1 358 11 3 942 1004 230 68 7 chr15 46797442 46797623 -56697351 - Lx5 LINE L1 -460 5417 5231 3 942 552 15 0 0 chr15 46797623 46797688 -56697286 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 3 942 1004 230 68 7 chr15 46797688 46797799 -56697175 - Lx5 LINE L1 -647 5230 5108 3 942 251 268 86 86 chr15 46797819 46797970 -56697004 + Kanga1 DNA Tc2 445 595 -1150 3 942 440 237 13 7 chr15 46797972 46798125 -56696849 + L1_Mur3 LINE L1 3124 3277 -2603 3 942 1087 241 51 129 chr15 46798437 46798537 -56696437 - Lx5 LINE L1 -911 4966 4843 3 942 835 166 13 0 chr15 46798537 46798688 -56696286 - Lx4A LINE L1 -10 7048 6896 3 942 1087 241 51 129 chr15 46798688 46799059 -56695915 - Lx5 LINE L1 -1035 4842 4532 3 942 511 291 7 7 chr15 46799067 46799202 -56695772 - Lx6 LINE L1 -318 7142 7008 3 942 189 352 107 69 chr15 46799225 46799673 -56695301 - L2 LINE L2 -1264 2155 1691 3 942 478 359 101 24 chr15 46800099 46800396 -56694578 - L2 LINE L2 -1748 1671 1352 3 942 438 209 0 0 chr15 46800938 46801077 -56693897 + GA-rich Low_complexity Low_complexity 2 140 0 3 942 623 288 135 20 chr15 46801249 46801494 -56693480 - MTD LTR MaLR -3 416 144 3 942 333 0 0 0 chr15 46801618 46801655 -56693319 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 942 378 0 0 0 chr15 46801655 46801696 -56693278 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 942 216 0 0 0 chr15 46801696 46801719 -56693255 + (GA)n Simple_repeat Simple_repeat 2 25 0 3 942 31289 98 11 2 chr15 46801929 46806742 -56688232 + L1Md_F2 LINE L1 424 5234 -649 3 942 207 0 0 0 chr15 46806742 46806765 -56688209 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 942 31289 81 9 1 chr15 46806765 46807108 -56687866 + L1Md_F2 LINE L1 5235 5584 -299 3 942 7449 71 5 6 chr15 46807108 46808103 -56686871 + L1Md_F2 LINE L1 5587 6580 -2 3 942 325 282 65 65 chr15 46808990 46809176 -56685798 - L1M5 LINE L1 -2949 3197 3012 3 942 535 343 20 50 chr15 46809193 46809494 -56685480 + Lx9 LINE L1 7101 7392 -252 3 942 28 0 0 0 chr15 46809576 46809604 -56685370 + AT_rich Low_complexity Low_complexity 1 28 0 3 942 28 91 0 0 chr15 46809800 46809877 -56685097 + AT_rich Low_complexity Low_complexity 1 77 0 3 942 37688 43 5 3 chr15 46810127 46816348 -56678626 - L1Md_T LINE L1 -5 6580 247 3 942 4846 82 0 0 chr15 46816738 46817493 -56677481 + L1_Mus2 LINE L1 5449 6202 -364 3 942 335 71 0 0 chr15 46817495 46817537 -56677437 - L1Md_F3 LINE L1 -574 6010 5969 3 942 2946 34 3 0 chr15 46817537 46817891 -56677083 + L1Md_F3 LINE L1 5629 5983 -599 3 942 209 231 0 44 chr15 46817900 46817968 -56677006 + A-rich Low_complexity Low_complexity 2 66 0 4 942 29 28 0 0 chr15 46818023 46818059 -56676915 + AT_rich Low_complexity Low_complexity 1 36 0 4 942 22 56 0 0 chr15 46818108 46818144 -56676830 + AT_rich Low_complexity Low_complexity 1 36 0 4 942 453 234 52 110 chr15 46819374 46819528 -56675446 + MTE2a LTR MaLR 1 145 -234 4 942 575 291 55 68 chr15 46819508 46819744 -56675230 + MTE2a LTR MaLR 105 337 -42 4 942 700 215 157 10 chr15 46819853 46820050 -56674924 + URR1A DNA MER1_type 1 226 0 4 942 1055 109 0 0 chr15 46820296 46820443 -56674531 - B1_Mus2 SINE Alu 0 147 1 4 942 323 310 0 0 chr15 46820538 46820625 -56674349 - LTR87 LTR ERVL? -232 392 306 4 942 22 35 0 0 chr15 46821121 46821150 -56673824 + AT_rich Low_complexity Low_complexity 1 29 0 4 942 472 348 37 37 chr15 46821163 46821351 -56673623 + B3 SINE B2 1 188 -28 4 942 23 0 0 0 chr15 46822401 46822424 -56672550 + AT_rich Low_complexity Low_complexity 1 23 0 4 942 32 0 0 0 chr15 46822581 46822613 -56672361 + AT_rich Low_complexity Low_complexity 1 32 0 4 942 351 439 16 21 chr15 46823004 46823195 -56671779 + LTR16A LTR ERVL 63 252 -199 4 942 563 110 295 27 chr15 46823493 46823596 -56671378 + B1_Mus2 SINE Alu 1 136 -11 4 942 194 0 39 0 chr15 46823596 46823622 -56671352 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 942 276 360 0 48 chr15 46823894 46823999 -56670975 + PB1D10 SINE Alu 10 109 -8 4 942 320 290 32 0 chr15 46824062 46824155 -56670819 + GA-rich Low_complexity Low_complexity 3 98 0 4 942 28 0 0 0 chr15 46824161 46824189 -56670785 + AT_rich Low_complexity Low_complexity 1 28 0 4 942 558 226 161 12 chr15 46824791 46824952 -56670022 + ORR1C2 LTR MaLR 2 186 -188 4 942 304 212 0 39 chr15 46824984 46825087 -56669887 + CT-rich Low_complexity Low_complexity 3 101 0 4 942 699 255 29 171 chr15 46825087 46825333 -56669641 + ORR1C2 LTR MaLR 174 384 0 4 942 447 19 0 0 chr15 46827099 46827151 -56667823 + (GA)n Simple_repeat Simple_repeat 1 52 0 4 942 495 336 0 0 chr15 46827156 46827290 -56667684 - RSINE1 SINE B4 -22 143 10 4 942 230 0 33 0 chr15 46827594 46827624 -56667350 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 942 1427 277 64 3 chr15 46827686 46828063 -56666911 - MTD LTR MaLR -19 400 1 4 942 21 71 0 0 chr15 46828258 46828300 -56666674 + AT_rich Low_complexity Low_complexity 1 42 0 4 942 402 370 43 17 chr15 46828526 46828760 -56666214 - MLT2B3 LTR ERVL -264 290 51 4 942 238 231 311 7 chr15 46828781 46828929 -56666045 + B2_Mm2 SINE B2 2 194 -1 4 942 819 283 112 0 chr15 46829024 46829275 -56665699 - Lx8 LINE L1 -236 7237 6959 4 942 33 25 0 0 chr15 46829321 46829361 -56665613 + AT_rich Low_complexity Low_complexity 1 40 0 4 942 444 254 59 57 chr15 46829378 46829606 -56665368 - L1_Mur3 LINE L1 -1254 4629 4401 4 942 369 216 106 14 chr15 46829685 46829826 -56665148 - L1_Mur3 LINE L1 -1621 4259 4106 4 942 261 169 6 58 chr15 46829826 46829924 -56665050 - ORR1D2 LTR MaLR 0 419 329 4 942 467 276 116 7 chr15 46830495 46830641 -56664333 + ORR1D2 LTR MaLR 12 173 -197 4 942 1581 81 0 9 chr15 46831401 46831625 -56663349 - L1Md_F2 LINE L1 -19 6563 6342 4 942 1120 49 7 7 chr15 46831625 46831769 -56663205 - L1Md_F2 LINE L1 -383 6199 6056 4 942 1373 82 1 16 chr15 46831764 46831983 -56662991 + L1_Mm LINE L1 5425 5637 -243 4 942 384 337 35 1 chr15 46832058 46832311 -56662663 + L1M3 LINE L1 5364 5621 -691 4 942 650 281 76 22 chr15 46832577 46832944 -56662030 - L1MD LINE L1 -1338 4808 4422 4 942 26 23 0 23 chr15 46833092 46833116 -56661858 + AT_rich Low_complexity Low_complexity 1 24 0 4 942 3895 126 29 14 chr15 46833116 46833743 -56661231 - Lx3A LINE L1 -7 6974 6339 4 942 26 23 0 23 chr15 46833743 46833762 -56661212 + AT_rich Low_complexity Low_complexity 1 19 0 4 942 189 0 0 0 chr15 46834062 46834083 -56660891 + (TTG)n Simple_repeat Simple_repeat 1 21 0 4 942 21 36 0 0 chr15 46834361 46834389 -56660585 + AT_rich Low_complexity Low_complexity 1 28 0 4 942 3984 143 78 24 chr15 46835417 46836184 -56658790 + RMER17D2 LTR ERVK 1 809 0 4 942 388 304 60 16 chr15 46836374 46836558 -56658416 + Lx9 LINE L1 7129 7320 -324 4 942 420 20 0 0 chr15 46836561 46836610 -56658364 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 942 574 162 19 0 chr15 46836781 46836886 -56658088 - Lx5 LINE L1 -1236 5814 5708 4 942 2599 222 48 11 chr15 46836846 46837389 -56657585 + Lx5 LINE L1 6313 6875 -175 4 942 278 355 41 61 chr15 46837566 46837713 -56657261 + MTEb LTR MaLR 168 311 -68 4 942 252 77 0 0 chr15 46837714 46837753 -56657221 + (A)n Simple_repeat Simple_repeat 1 39 0 4 942 257 227 15 29 chr15 46837755 46837823 -56657151 + MTEb LTR MaLR 310 376 -3 4 942 1103 285 51 24 chr15 46838009 46838343 -56656631 - ORR1D1 LTR MaLR -4 370 28 4 942 324 0 0 0 chr15 46838381 46838417 -56656557 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 942 279 208 0 0 chr15 46838521 46838569 -56656405 + RMER20B LTR ERVK 1 48 -579 4 942 316 143 52 91 chr15 46838573 46838650 -56656324 + RMER16 LTR ERVK 5 78 -455 4 942 627 256 32 20 chr15 46838834 46839081 -56655893 + RMER16 LTR ERVK 284 533 0 4 942 2267 177 19 12 chr15 46839082 46839499 -56655475 + RMER20B LTR ERVK 44 463 -164 4 942 21 82 0 0 chr15 46839659 46839708 -56655266 + AT_rich Low_complexity Low_complexity 1 49 0 4 942 22 0 0 0 chr15 46839949 46839971 -56655003 + AT_rich Low_complexity Low_complexity 1 22 0 4 942 611 241 38 64 chr15 46841143 46841409 -56653565 + Lx7 LINE L1 7234 7492 -204 4 942 30 45 0 0 chr15 46841544 46841588 -56653386 + AT_rich Low_complexity Low_complexity 1 44 0 4 942 368 295 129 18 chr15 46841713 46841985 -56652989 - MER67C LTR ERV1 -230 481 146 4 942 263 28 28 0 chr15 46843570 46843606 -56651368 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 942 189 0 0 0 chr15 46843606 46843626 -56651348 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 942 267 31 0 0 chr15 46843626 46843658 -56651316 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 942 979 146 43 43 chr15 46843685 46843871 -56651103 + B2_Mm2 SINE B2 2 187 -8 4 942 322 225 30 30 chr15 46844835 46844941 -56650033 - L1_Rod LINE L1 -440 5860 5693 4 942 401 305 19 0 chr15 46845950 46846055 -56648919 - Lx8 LINE L1 -202 7271 7165 4 942 872 132 31 0 chr15 46846071 46846230 -56648744 - Lx2 LINE L1 0 6997 6834 4 942 9798 190 15 32 chr15 46846230 46848693 -56646281 - Lx2 LINE L1 -943 6054 3634 4 942 502 126 0 56 chr15 46848750 46848876 -56646098 + CT-rich Low_complexity Low_complexity 4 122 0 4 942 751 165 0 52 chr15 46848889 46849023 -56645951 - B1_Mur4 SINE Alu -13 137 11 4 942 1038 253 36 36 chr15 46849218 46849604 -56645370 + L1MA4 LINE L1 5542 5927 -373 4 942 999 86 0 0 chr15 46849615 46849754 -56645220 + (TCTCCC)n Simple_repeat Simple_repeat 6 144 0 4 942 231 95 0 45 chr15 46850005 46850049 -56644925 + B1_Mus2 SINE Alu 18 59 -88 4 942 192 149 0 0 chr15 46850052 46850099 -56644875 + (GGGAGA)n Simple_repeat Simple_repeat 4 50 0 4 942 227 200 69 59 chr15 46850099 46850200 -56644774 + RLTR25B LTR ERVK 397 498 -530 4 942 709 66 0 62 chr15 46850143 46850256 -56644718 + B1_Mus2 SINE Alu 42 147 0 4 942 415 311 86 20 chr15 46850332 46850483 -56644491 + MTE-int LTR MaLR 1381 1541 -39 4 942 531 0 0 0 chr15 46850614 46850673 -56644301 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 942 261 57 0 0 chr15 46850673 46850707 -56644267 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 942 6303 149 22 5 chr15 46850925 46852004 -56642970 - Lx LINE L1 -7 6647 5561 4 942 1544 144 4 8 chr15 46851993 46852258 -56642716 - L1_Mur2 LINE L1 -2166 3711 3448 4 942 4781 120 6 16 chr15 46852253 46853060 -56641914 + MusHAL1 LINE L1 1452 2250 -462 4 942 3394 178 13 7 chr15 46853099 46853256 -56641718 - L1VL4 LINE L1 -281 3278 3121 4 942 2701 61 6 14 chr15 46853256 46853545 -56641429 + ORR1A1 LTR MaLR 1 287 -59 4 942 261 0 0 0 chr15 46853545 46853574 -56641400 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 942 2701 61 6 14 chr15 46853574 46853633 -56641341 + ORR1A1 LTR MaLR 288 346 0 4 942 3394 178 13 7 chr15 46853633 46854154 -56640820 - L1VL4 LINE L1 -439 3120 2596 4 942 8236 36 2 6 chr15 46854154 46854229 -56640745 - L1Md_T LINE L1 0 6582 6511 4 942 3699 16 121 0 chr15 46854229 46854669 -56640305 + MT2_Mm LTR ERVL 1 493 0 4 942 38839 33 1 7 chr15 46854669 46860640 -56634334 - L1Md_T LINE L1 -72 6510 583 4 942 6674 168 121 19 chr15 46860637 46860757 -56634217 - L1VL4 LINE L1 -949 2610 2489 4 942 4110 17 38 2 chr15 46860757 46861233 -56633741 + MT2_Mm LTR ERVL 1 493 0 4 942 8848 42 6 1 chr15 46861237 46862328 -56632646 + MTA_Mm-int LTR MaLR 3 1098 0 4 942 3487 18 2 0 chr15 46862328 46862723 -56632251 + MTA_Mm LTR MaLR 1 396 0 4 942 6674 179 99 26 chr15 46862723 46864823 -56630151 - L1VL4 LINE L1 -1071 2488 214 4 942 632 322 21 65 chr15 46864878 46865207 -56629767 - Lx8 LINE L1 -906 6567 6258 4 942 218 173 19 19 chr15 46865244 46865297 -56629677 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 942 360 0 0 0 chr15 46865583 46865623 -56629351 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 942 570 114 0 0 chr15 46865657 46865745 -56629229 + (TA)n Simple_repeat Simple_repeat 2 89 0 4 942 229 220 32 32 chr15 46865745 46865839 -56629135 + Lx9 LINE L1 7550 7643 -1 4 942 1152 306 54 7 chr15 46865856 46866438 -56628536 + Lx8 LINE L1 5313 5928 -1545 4 942 381 75 0 0 chr15 46866523 46866576 -56628398 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 942 264 260 0 0 chr15 46866795 46866845 -56628129 - 5S rRNA rRNA -68 53 4 4 942 180 0 0 0 chr15 46867241 46867261 -56627713 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 942 489 34 0 0 chr15 46867261 46867319 -56627655 + (TA)n Simple_repeat Simple_repeat 2 60 0 4 942 489 110 0 0 chr15 46867319 46867409 -56627565 + (TG)n Simple_repeat Simple_repeat 2 92 0 4 942 23 33 0 0 chr15 46868085 46868115 -56626859 + AT_rich Low_complexity Low_complexity 1 30 0 4 942 228 364 81 24 chr15 46868754 46868878 -56626096 + B4 SINE B4 162 292 0 4 942 255 31 0 0 chr15 46868891 46868923 -56626051 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 942 26 50 0 0 chr15 46869464 46869504 -56625470 + AT_rich Low_complexity Low_complexity 1 40 0 5 942 21 0 0 0 chr15 46870301 46870322 -56624652 + AT_rich Low_complexity Low_complexity 1 21 0 5 942 24043 116 91 9 chr15 46870676 46874813 -56620161 - L1_Mus2 LINE L1 -1 6565 2006 5 942 230 0 0 32 chr15 46874813 46874844 -56620130 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 5 942 24043 109 54 19 chr15 46874844 46876612 -56618362 - L1_Mus2 LINE L1 -3878 2005 217 5 942 35 24 0 0 chr15 46876661 46876703 -56618271 + AT_rich Low_complexity Low_complexity 1 42 0 5 942 1657 275 65 102 chr15 46877069 46877608 -56617366 - Lx7 LINE L1 0 7696 7198 5 942 3075 154 118 54 chr15 46877608 46878368 -56616606 + RMER17D2 LTR ERVK 1 809 0 5 942 1657 275 65 102 chr15 46878368 46878663 -56616311 - Lx7 LINE L1 -499 7197 6893 5 942 34769 77 2 4 chr15 46878681 46885011 -56609963 - L1Md_F2 LINE L1 -2 6583 167 5 942 383 214 14 0 chr15 46885079 46885149 -56609825 - Lx7 LINE L1 -819 6877 6807 5 942 721 105 108 43 chr15 46885517 46885656 -56609318 - B1_Mus1 SINE Alu 0 148 1 5 942 996 102 7 0 chr15 46885683 46885820 -56609154 - B1_Mus1 SINE Alu -10 138 1 5 942 26 50 0 0 chr15 46886325 46886365 -56608609 + AT_rich Low_complexity Low_complexity 1 40 0 5 942 461 231 6 0 chr15 46887229 46887402 -56607572 + (TG)n Simple_repeat Simple_repeat 2 175 0 5 942 229 277 15 0 chr15 46887408 46887473 -56607501 + (TATG)n Simple_repeat Simple_repeat 4 69 0 5 942 446 254 45 25 chr15 46887492 46887734 -56607240 + Lx7 LINE L1 7445 7691 -5 5 942 210 136 0 0 chr15 46888820 46888864 -56606110 + (GA)n Simple_repeat Simple_repeat 2 45 0 5 942 441 95 0 0 chr15 46888886 46888949 -56606025 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 942 275 65 22 0 chr15 46889152 46889198 -56605776 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 5 942 888 102 0 0 chr15 46889280 46889427 -56605547 + (GA)n Simple_repeat Simple_repeat 2 148 0 5 942 1601 316 32 39 chr15 46889429 46890024 -56604950 + Lx6 LINE L1 6865 7455 -5 5 942 336 218 0 65 chr15 46890722 46890815 -56604159 + Lx6 LINE L1 7373 7459 -1 5 942 311 391 43 0 chr15 46890841 46890979 -56603995 + RSINE1 SINE B4 8 151 -14 5 942 281 297 14 0 chr15 46891133 46891207 -56603767 + B4A SINE B4 196 270 -22 5 942 333 109 0 0 chr15 46891243 46891298 -56603676 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 942 1333 186 175 9 chr15 46891482 46891797 -56603177 - ORR1B2 LTR MaLR 0 367 1 5 942 192 97 0 0 chr15 46892219 46892250 -56602724 + (TAAAAA)n Simple_repeat Simple_repeat 4 34 0 5 942 1023 343 50 50 chr15 46892428 46892951 -56602023 - Lx7 LINE L1 -539 7157 6645 5 942 315 0 0 0 chr15 46892951 46892986 -56601988 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 5 942 1023 343 50 50 chr15 46892986 46893066 -56601908 - Lx7 LINE L1 -1052 6644 6556 5 942 22 0 0 0 chr15 46894802 46894824 -56600150 + AT_rich Low_complexity Low_complexity 1 22 0 5 942 28 61 0 0 chr15 46895187 46895236 -56599738 + AT_rich Low_complexity Low_complexity 1 49 0 5 942 363 364 7 2 chr15 46895392 46895540 -56599434 + B1F SINE Alu 1 149 0 5 942 26 93 0 0 chr15 46895661 46895736 -56599238 + AT_rich Low_complexity Low_complexity 1 75 0 5 942 211 225 0 0 chr15 46896629 46896669 -56598305 + L2b LINE L2 3330 3369 -6 5 942 857 276 17 22 chr15 46897229 46897459 -56597515 + Lx5 LINE L1 6817 7045 -5 5 942 1105 82 0 0 chr15 46897568 46897715 -56597259 + B1_Mus1 SINE Alu 2 148 0 5 942 363 23 0 0 chr15 46897946 46897990 -56596984 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 5 942 32 43 0 0 chr15 46898581 46898627 -56596347 + AT_rich Low_complexity Low_complexity 1 46 0 5 942 331 270 63 0 chr15 46899426 46899552 -56595422 - Lx7 LINE L1 0 7696 7563 5 942 229 118 12 84 chr15 46899572 46899655 -56595319 + (TAAA)n Simple_repeat Simple_repeat 1 77 0 5 942 1453 312 48 26 chr15 46899658 46900201 -56594773 - Lx6 LINE L1 -733 6727 6173 5 942 19500 126 17 11 chr15 46900205 46901736 -56593238 + L1_Mus3 LINE L1 2673 4195 -1688 5 942 414 0 0 0 chr15 46901736 46901782 -56593192 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 942 19500 126 17 11 chr15 46901782 46901931 -56593043 + L1_Mus3 LINE L1 4196 4352 -1531 5 942 3078 66 5 0 chr15 46901931 46902325 -56592649 + MTA_Mm LTR MaLR 1 396 0 5 942 19500 115 23 15 chr15 46902325 46904596 -56590378 + L1_Mus3 LINE L1 4353 6634 -4 5 942 2925 239 134 6 chr15 46904594 46905693 -56589281 - Lx7 LINE L1 -1528 6168 4928 5 942 1846 162 34 3 chr15 46905723 46906051 -56588923 - Lx2 LINE L1 -8 6989 6652 5 942 9534 196 26 14 chr15 46906051 46908085 -56586889 + Lx2 LINE L1 3816 5872 -11 5 942 2194 260 82 91 chr15 46908120 46909043 -56585931 - RMER17B LTR ERVK -43 915 1 5 942 4164 139 55 0 chr15 46909043 46909753 -56585221 + Lx2 LINE L1 5884 6632 -365 5 942 869 213 45 10 chr15 46909753 46909952 -56585022 - RMER6C LTR ERVK -1 689 484 5 942 327 295 93 7 chr15 46910100 46910151 -56584823 - Lx7 LINE L1 -1106 4774 4717 5 942 1272 148 8 13 chr15 46910151 46910390 -56584584 - Lx2 LINE L1 -12 6985 6748 5 942 327 295 93 7 chr15 46910390 46910478 -56584496 - Lx7 LINE L1 -1164 4716 4624 5 942 11431 218 51 44 chr15 46910565 46911105 -56583869 - Lx7 LINE L1 -1251 4629 4056 5 942 1093 75 7 0 chr15 46911105 46911251 -56583723 + B1_Mus2 SINE Alu 1 147 0 5 942 11431 218 51 44 chr15 46911251 46913298 -56581676 - Lx7 LINE L1 -1825 4055 2058 5 942 417 70 0 0 chr15 46913298 46913355 -56581619 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 942 11431 229 67 32 chr15 46913355 46914547 -56580427 - Lx7 LINE L1 -3823 2057 788 5 942 534 43 0 0 chr15 46914547 46914616 -56580358 + (TA)n Simple_repeat Simple_repeat 2 70 0 5 942 2211 252 102 7 chr15 46914616 46914823 -56580151 - Lx7 LINE L1 -6941 787 561 5 942 839 306 52 104 chr15 46914825 46915267 -56579707 + RMER2 LTR ERV1 122 540 -27 5 942 612 288 246 2 chr15 46915287 46915697 -56579277 - Lx7 LINE L1 -7163 565 56 5 942 1171 295 75 75 chr15 46915798 46916164 -56578810 - RLTR40 LTR ERVK -78 739 351 5 942 207 0 0 0 chr15 46916164 46916187 -56578787 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 942 1171 295 75 75 chr15 46916187 46916541 -56578433 - RLTR40 LTR ERVK -467 350 20 5 942 431 246 58 29 chr15 46916559 46916731 -56578243 - L1M2 LINE L1 -1357 4786 4610 5 942 240 35 0 0 chr15 46917203 46917232 -56577742 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 942 476 186 0 9 chr15 46917249 46917273 -56577701 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 942 1898 114 86 76 chr15 46917273 46917680 -56577294 - IAPLTR2a LTR ERVK 0 411 1 5 942 476 186 0 9 chr15 46917680 46917769 -56577205 + (TA)n Simple_repeat Simple_repeat 2 90 0 5 942 324 0 0 0 chr15 46917829 46917865 -56577109 + (A)n Simple_repeat Simple_repeat 1 36 0 5 942 1029 317 75 24 chr15 46917865 46918501 -56576473 + L1MA9 LINE L1 5476 6144 -168 5 942 1752 131 70 0 chr15 46920216 46920528 -56574446 + Lx LINE L1 6292 6625 -29 5 942 560 320 40 18 chr15 46921597 46921820 -56573154 + MTB_Mm LTR MaLR 134 361 -46 5 942 25 0 0 0 chr15 46922014 46922039 -56572935 + AT_rich Low_complexity Low_complexity 1 25 0 5 942 279 318 122 41 chr15 46922084 46922233 -56572741 + B3 SINE B2 3 170 -46 5 942 225 0 0 0 chr15 46922233 46922258 -56572716 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 942 738 84 0 0 chr15 46922259 46922366 -56572608 + (CA)n Simple_repeat Simple_repeat 2 108 0 5 942 279 318 122 41 chr15 46922366 46922411 -56572563 + B3 SINE B2 171 214 -2 5 942 719 332 63 71 chr15 46922444 46923092 -56571882 + Lx7 LINE L1 6733 7375 -98 5 942 1208 237 88 15 chr15 46923168 46923510 -56571464 + ORR1B2 LTR MaLR 1 367 0 5 943 25 0 0 0 chr15 46924710 46924735 -56570239 + AT_rich Low_complexity Low_complexity 1 25 0 5 943 2502 94 58 5 chr15 46926291 46926688 -56568286 + BGLII_Mus LTR ERVK 5 422 0 5 943 441 95 0 0 chr15 46927660 46927723 -56567251 + (TC)n Simple_repeat Simple_repeat 2 64 0 5 943 490 347 57 92 chr15 46928096 46928358 -56566616 - MTEa LTR MaLR -73 306 56 5 943 576 0 0 0 chr15 46928358 46928422 -56566552 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 943 490 347 57 92 chr15 46928422 46928476 -56566498 - MTEa LTR MaLR -324 55 1 5 943 7662 151 31 14 chr15 46929334 46930670 -56564304 - Lx2B LINE L1 -3 6997 5638 5 943 22 56 0 0 chr15 46930770 46930806 -56564168 + AT_rich Low_complexity Low_complexity 1 36 0 5 943 612 287 40 25 chr15 46931304 46931579 -56563395 - L1_Rod LINE L1 -953 4894 4616 5 943 1015 261 28 73 chr15 46931646 46932043 -56562931 + L1_Rod LINE L1 5261 5639 -208 5 943 11993 190 142 25 chr15 46932047 46932596 -56562378 + Lx LINE L1 2365 2926 -2951 5 943 1153 102 34 6 chr15 46932596 46932774 -56562200 + B2_Mm2 SINE B2 2 184 -11 5 943 11993 190 142 25 chr15 46932774 46932880 -56562094 + Lx LINE L1 2927 3063 -2814 5 943 1038 78 0 0 chr15 46932880 46933021 -56561953 + (GAA)n Simple_repeat Simple_repeat 1 141 0 5 943 11993 173 106 18 chr15 46933021 46936257 -56558717 + Lx LINE L1 3064 6646 -8 5 943 462 108 0 61 chr15 46936262 46936361 -56558613 + GA-rich Low_complexity Low_complexity 1 93 0 5 943 505 212 53 33 chr15 46936361 46936379 -56558595 + Lx4B LINE L1 5723 5738 -139 5 943 705 56 0 0 chr15 46936379 46936469 -56558505 + (GAAAA)n Simple_repeat Simple_repeat 1 90 0 5 943 980 194 25 49 chr15 46936469 46936713 -56558261 + Lx4B LINE L1 5745 5982 -1076 5 943 2000 183 101 49 chr15 46936713 46937220 -56557754 - RMER16 LTR ERVK 0 533 1 5 943 20031 92 24 23 chr15 46937220 46940178 -56554796 - RMER16-int LTR ERVK 0 5406 2446 5 943 2011 222 71 0 chr15 46940178 46940628 -56554346 + Lx4B LINE L1 6126 6607 -451 5 943 3881 87 2 0 chr15 46940624 46941152 -56553822 - L1_Mm LINE L1 -177 5706 5178 5 943 2791 99 3 0 chr15 46941152 46941544 -56553430 + L1_Mus1 LINE L1 6175 6567 0 5 943 2002 217 8 58 chr15 46941564 46942049 -56552925 + Lx4B LINE L1 6591 7051 -7 5 943 228 185 0 0 chr15 46942325 46942379 -56552595 + CT-rich Low_complexity Low_complexity 1 54 0 5 943 210 105 0 0 chr15 46943410 46943448 -56551526 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 5 943 2490 152 16 9 chr15 46943883 46944322 -56550652 + Lx3A LINE L1 6534 6975 -6 5 943 23 33 0 0 chr15 46944615 46944645 -56550329 + AT_rich Low_complexity Low_complexity 1 30 0 5 943 501 17 0 0 chr15 46944728 46944786 -56550188 + (GA)n Simple_repeat Simple_repeat 2 59 0 5 943 3130 145 108 43 chr15 46944786 46945106 -56549868 - RMER17A LTR ERVK -2 749 441 5 943 1223 85 11 0 chr15 46945106 46945283 -56549691 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 5 943 318 50 0 0 chr15 46945283 46945323 -56549651 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 5 943 3130 145 108 43 chr15 46945323 46945702 -56549272 - RMER17A LTR ERVK -311 440 4 5 943 486 0 0 0 chr15 46945703 46945757 -56549217 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 943 24 32 0 0 chr15 46945888 46945919 -56549055 + AT_rich Low_complexity Low_complexity 1 31 0 5 943 270 0 0 0 chr15 46945941 46945971 -56549003 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 5 943 7635 143 20 12 chr15 46945971 46947659 -56547315 - Lx3A LINE L1 -13 6968 5263 5 943 3078 173 45 6 chr15 46947636 46947704 -56547270 - Lx3A LINE L1 -1076 4801 4733 5 943 186 43 0 0 chr15 46947704 46947727 -56547247 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 5 943 3078 173 45 6 chr15 46947727 46948287 -56546687 - Lx3A LINE L1 -1145 4732 4149 5 943 1564 171 11 3 chr15 46948298 46948585 -56546389 - Lx2A1 LINE L1 -6 7002 6714 5 943 248 320 72 103 chr15 46948615 46948838 -56546136 - MLT1A1 LTR MaLR -143 265 50 6 943 267 317 17 0 chr15 46950521 46950581 -56544393 - ID4 SINE ID -13 70 10 6 943 616 61 0 20 chr15 46950820 46950920 -56544054 + (GTTTG)n Simple_repeat Simple_repeat 2 99 0 6 943 303 268 117 3 chr15 46950920 46951017 -56543957 - B1_Mur4 SINE Alu -3 147 42 6 943 361 291 73 66 chr15 46951023 46951295 -56543679 + L1VL1 LINE L1 253 526 -5896 6 943 1346 230 24 6 chr15 46951346 46951678 -56543296 + L1Md_F LINE L1 711 1048 -5571 6 943 328 73 0 0 chr15 46951674 46951715 -56543259 + L1Md_F2 LINE L1 5546 5586 -297 6 943 7618 69 0 11 chr15 46951715 46952716 -56542258 + L1Md_F2 LINE L1 5587 6576 -6 6 943 37927 12 1 7 chr15 46952720 46957937 -56537037 + L1Md_A LINE L1 410 5585 -298 6 943 8814 13 0 0 chr15 46957938 46958933 -56536041 + L1Md_A LINE L1 5587 6581 -1 6 943 1024 113 6 26 chr15 46958944 46959153 -56535821 + L1Md_F LINE L1 995 1277 -5383 6 943 29584 112 25 12 chr15 46959157 46960736 -56534238 + L1Md_F LINE L1 371 1982 -3901 6 943 390 21 0 0 chr15 46960736 46960783 -56534191 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 6 943 29584 90 12 2 chr15 46960783 46964279 -56530695 + L1Md_F LINE L1 1983 5505 -378 6 943 1160 129 104 0 chr15 46964290 46964492 -56530482 + L1_Mus2 LINE L1 6342 6564 -2 6 943 224 242 87 43 chr15 46964503 46964572 -56530402 - B1_Mur4 SINE Alu -78 72 1 6 943 382 331 94 13 chr15 46964743 46964902 -56530072 - RMER15 LTR ERVL -94 481 310 6 943 268 328 185 0 chr15 46965142 46965261 -56529713 - MIRb SINE MIR -40 228 88 6 943 38 61 0 0 chr15 46965328 46965394 -56529580 + AT_rich Low_complexity Low_complexity 1 66 0 6 943 21 36 0 0 chr15 46965459 46965487 -56529487 + AT_rich Low_complexity Low_complexity 1 28 0 6 943 493 269 0 15 chr15 46965568 46965700 -56529274 + Lx7 LINE L1 6953 7082 -614 6 943 798 206 29 35 chr15 46965728 46965899 -56529075 + B2_Mm2 SINE B2 1 170 -25 6 943 508 283 114 76 chr15 46965912 46966210 -56528764 + Lx7 LINE L1 7118 7427 -269 6 943 432 104 0 0 chr15 46966210 46966277 -56528697 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 943 508 283 114 76 chr15 46966277 46966441 -56528533 + Lx7 LINE L1 7428 7597 -99 6 943 354 378 93 0 chr15 46966444 46966703 -56528271 - Tigger7 DNA MER2_type -2129 362 80 6 943 241 186 29 0 chr15 46966844 46966914 -56528060 + (TA)n Simple_repeat Simple_repeat 2 73 0 6 943 492 18 0 0 chr15 46967499 46967556 -56527418 + (TA)n Simple_repeat Simple_repeat 1 57 0 6 943 617 367 92 0 chr15 46967681 46968008 -56526966 + ORR1D2 LTR MaLR 11 367 -3 6 943 647 257 33 107 chr15 46968012 46968254 -56526720 + ORR1D2-int LTR MaLR 2 225 -1145 6 943 1424 245 196 45 chr15 46968254 46968854 -56526120 - RMER6C LTR ERVK 0 690 1 6 943 2584 296 49 38 chr15 46968854 46969778 -56525196 + ORR1D2-int LTR MaLR 220 1153 -217 6 943 1945 140 41 0 chr15 46970627 46970941 -56524033 + ORR1A2 LTR MaLR 1 327 0 6 943 1111 211 89 27 chr15 46970999 46971257 -56523717 + Lx5 LINE L1 6774 7047 -3 6 943 297 234 102 41 chr15 46971301 46971328 -56523646 + ORR1D2-int LTR MaLR 1145 1171 -199 6 943 609 14 0 0 chr15 46971328 46971398 -56523576 + (TA)n Simple_repeat Simple_repeat 1 70 0 6 943 297 234 102 41 chr15 46971398 46971468 -56523506 + ORR1D2-int LTR MaLR 1172 1247 -123 6 943 202 304 37 47 chr15 46972045 46972152 -56522822 - L3 LINE CR1 -3428 1061 956 6 943 940 129 0 24 chr15 46972473 46972640 -56522334 - Lx LINE L1 -7 6647 6485 6 943 2711 152 9 9 chr15 46972641 46973106 -56521868 + Lx3A LINE L1 5650 6114 -867 6 943 2159 110 3 58 chr15 46973241 46973587 -56521387 - ORR1A2 LTR MaLR 0 327 1 6 943 8944 168 87 12 chr15 46973587 46975413 -56519561 - ORR1A2-int LTR MaLR 0 1963 1 6 943 564 91 0 0 chr15 46975414 46975491 -56519483 - ORR1A2 LTR MaLR -1 345 269 6 943 1453 152 0 20 chr15 46976074 46976329 -56518645 - ORR1A2 LTR MaLR -77 250 1 6 943 315 0 0 0 chr15 46977628 46977663 -56517311 + (T)n Simple_repeat Simple_repeat 1 35 0 6 943 2224 53 3 0 chr15 46978093 46978375 -56516599 + L1Md_A LINE L1 6299 6581 -1 6 943 285 29 0 0 chr15 46978383 46978417 -56516557 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 943 6265 141 28 22 chr15 46978417 46978632 -56516342 - Lx LINE L1 -12 6642 6439 6 943 2366 90 36 0 chr15 46978632 46978966 -56516008 + ORR1A1 LTR MaLR 1 346 0 6 943 6265 166 21 15 chr15 46978966 46980472 -56514502 - Lx LINE L1 -216 6438 4916 6 943 321 130 56 0 chr15 46980474 46980528 -56514446 + L1_Mm LINE L1 4439 4495 -1388 6 943 516 305 73 77 chr15 46980694 46981241 -56513733 - L1MA4 LINE L1 -365 5935 5391 6 943 716 261 147 38 chr15 46981278 46981780 -56513194 - L1MA4 LINE L1 -760 5383 4827 6 943 1095 95 7 0 chr15 46982231 46982378 -56512596 + B1_Mus1 SINE Alu 1 148 0 6 943 23 0 0 0 chr15 46982697 46982720 -56512254 + AT_rich Low_complexity Low_complexity 1 23 0 6 943 282 301 161 0 chr15 46982776 46982869 -56512105 + PB1D10 SINE Alu 2 109 -8 6 943 6153 89 25 3 chr15 46983228 46984109 -56510865 - L1_Mus3 LINE L1 0 6638 5739 6 943 2316 68 3 18 chr15 46984108 46984436 -56510538 - L1Md_F2 LINE L1 0 6582 6260 6 943 991 98 0 0 chr15 46984436 46984587 -56510387 - L1_Mus3 LINE L1 -922 5716 5560 6 943 5890 168 21 19 chr15 46984704 46985821 -56509153 + Lx2 LINE L1 5878 6997 0 6 943 50 59 0 0 chr15 46985857 46985942 -56509032 + AT_rich Low_complexity Low_complexity 1 85 0 6 943 996 275 92 9 chr15 46985982 46986320 -56508654 + Lx6 LINE L1 7030 7395 -65 6 943 7761 159 48 9 chr15 46987055 46988959 -56506015 - Lx2 LINE L1 0 6997 4997 6 943 1388 181 159 0 chr15 46988960 46989319 -56505655 - Lx2 LINE L1 -2800 3080 2665 6 943 334 228 81 139 chr15 46989742 46989850 -56505124 + RNLTR23 LTR ERVK 480 579 -63 6 943 327 25 0 0 chr15 46989850 46989890 -56505084 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 6 943 334 228 81 139 chr15 46989890 46989954 -56505020 + RNLTR23 LTR ERVK 580 642 0 6 943 435 258 17 58 chr15 46990152 46990325 -56504649 + RNLTR23 LTR ERVK 477 642 0 6 943 1059 31 0 0 chr15 46990501 46990628 -56504346 + (TTCTCC)n Simple_repeat Simple_repeat 3 129 0 6 943 256 239 34 0 chr15 46991602 46991690 -56503284 - Lx6 LINE L1 -5 7455 7365 6 943 585 165 0 23 chr15 46991714 46991844 -56503130 + Lx2 LINE L1 6870 6996 -1 6 943 253 170 146 11 chr15 46991861 46991950 -56503024 + L1_Mur3 LINE L1 3072 3172 -2708 6 943 7103 35 2 0 chr15 46991952 46992801 -56502173 + L1Md_F2 LINE L1 4736 5586 -297 6 943 8018 49 2 1 chr15 46992802 46993796 -56501178 + L1Md_F2 LINE L1 5588 6582 0 6 943 1178 244 56 25 chr15 46993857 46994265 -56500709 + L1_Mur3 LINE L1 3241 3661 -2219 6 943 1346 320 37 56 chr15 46994260 46995049 -56499925 - Lx2 LINE L1 -6965 763 65 6 943 441 322 17 2 chr15 46995101 46995325 -56499649 - L1_Mur3 LINE L1 -7179 533 114 6 943 209 207 24 24 chr15 46995398 46995482 -56499492 + (TATAA)n Simple_repeat Simple_repeat 5 88 0 6 943 320 297 85 118 chr15 46995776 46996142 -56498832 + RMER10A LTR ERVL 12 365 -77 6 943 1033 103 14 0 chr15 46996215 46996360 -56498614 + B1_Mus1 SINE Alu 2 148 0 6 943 264 0 20 80 chr15 46996361 46996411 -56498563 + (CAAAAA)n Simple_repeat Simple_repeat 3 49 0 6 943 650 324 148 16 chr15 46996622 46996926 -56498048 - MTE-int LTR MaLR -577 1003 660 6 943 33 0 0 0 chr15 46999252 46999285 -56495689 + AT_rich Low_complexity Low_complexity 1 33 0 6 943 302 200 14 0 chr15 46999288 46999358 -56495616 - Lx9 LINE L1 -5 7639 7569 6 943 2330 213 125 11 chr15 47000380 47000989 -56493985 + RMER6C LTR ERVK 1 678 -12 1 943 548 335 5 55 chr15 47001296 47001495 -56493479 + B3A SINE B2 5 193 -5 2 943 335 276 31 93 chr15 47001551 47001740 -56493234 + L1M3 LINE L1 4926 5093 -1047 3 943 2605 109 45 0 chr15 47001740 47002143 -56492831 - BGLII LTR ERVK 0 421 1 4 943 335 276 31 93 chr15 47002143 47002308 -56492666 + L1M3 LINE L1 5094 5258 -882 3 943 268 224 89 46 chr15 47002367 47002497 -56492477 + L1M3 LINE L1 5333 5466 -837 3 943 3899 136 72 7 chr15 47002639 47003133 -56491841 + L1_Mur1 LINE L1 2939 3479 -2407 5 943 338 32 79 0 chr15 47003133 47003196 -56491778 + (CAAA)n Simple_repeat Simple_repeat 1 68 0 6 943 3899 87 45 10 chr15 47003196 47003596 -56491378 + L1_Mur1 LINE L1 3476 3898 -16 5 943 16634 108 19 71 chr15 47003603 47006619 -56488355 + L1_Mur1 LINE L1 2098 4955 -931 7 943 259 309 61 20 chr15 47007576 47007675 -56487299 - YREP_Mm Unknown Unknown -1516 296 194 8 943 342 0 0 0 chr15 47008181 47008219 -56486755 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 943 22 56 0 0 chr15 47008411 47008447 -56486527 + AT_rich Low_complexity Low_complexity 1 36 0 1 943 21 0 0 0 chr15 47008470 47008491 -56486483 + AT_rich Low_complexity Low_complexity 1 21 0 1 943 3098 152 23 68 chr15 47009194 47009795 -56485179 + Lx3A LINE L1 6398 6971 -10 1 943 197 59 0 56 chr15 47009802 47009838 -56485136 + (TAAAAA)n Simple_repeat Simple_repeat 4 37 0 1 943 21 0 0 0 chr15 47009850 47009871 -56485103 + AT_rich Low_complexity Low_complexity 1 21 0 1 943 182 315 26 64 chr15 47011420 47011498 -56483476 + MER5A DNA MER1_type 10 84 -105 1 943 35207 36 5 0 chr15 47012143 47017546 -56477428 + L1Md_T LINE L1 65 5589 -297 1 943 8905 6 0 0 chr15 47017546 47018542 -56476432 + L1Md_T LINE L1 5590 6585 0 1 943 255 256 0 0 chr15 47018628 47018706 -56476268 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 943 312 48 0 0 chr15 47018742 47018784 -56476190 + (A)n Simple_repeat Simple_repeat 1 42 0 1 943 21 0 0 0 chr15 47018903 47018924 -56476050 + AT_rich Low_complexity Low_complexity 1 21 0 1 943 382 304 101 34 chr15 47019157 47019365 -56475609 - RMER15 LTR ERVL -17 558 337 2 943 21 57 0 0 chr15 47019946 47019981 -56474993 + AT_rich Low_complexity Low_complexity 1 35 0 2 943 24 32 0 0 chr15 47020790 47020821 -56474153 + AT_rich Low_complexity Low_complexity 1 31 0 2 943 14518 112 26 0 chr15 47020910 47023841 -56471133 + L1Md_F LINE L1 344 3353 -2530 2 943 7630 70 5 1 chr15 47023828 47024821 -56470153 + L1Md_F LINE L1 4787 5783 -100 2 943 883 144 69 11 chr15 47024821 47025010 -56469964 + L1Md_F2 LINE L1 6382 6581 -1 2 943 785 295 43 31 chr15 47025010 47025062 -56469912 + Lx7 LINE L1 5782 5842 -1802 2 943 35 92 0 0 chr15 47025907 47026005 -56468969 + AT_rich Low_complexity Low_complexity 1 98 0 2 943 1089 75 0 20 chr15 47026500 47026649 -56468325 + B1_Mus2 SINE Alu 2 147 0 2 943 21 36 0 0 chr15 47027136 47027164 -56467810 + AT_rich Low_complexity Low_complexity 1 28 0 2 943 186 133 0 0 chr15 47027210 47027240 -56467734 + (TAGA)n Simple_repeat Simple_repeat 1 30 0 2 943 24 0 0 0 chr15 47027266 47027290 -56467684 + AT_rich Low_complexity Low_complexity 1 24 0 3 943 1591 163 84 51 chr15 47027624 47027980 -56466994 - RLTR9A LTR ERVK 0 368 1 3 943 334 130 0 36 chr15 47027999 47028055 -56466919 - ETnERV2-int LTR ERVK -22 7384 7331 3 943 436 235 0 50 chr15 47028493 47028614 -56466360 - ETnERV2-int LTR ERVK -1195 6211 6097 3 943 13674 166 51 58 chr15 47028622 47031858 -56463116 - ETnERV2-int LTR ERVK -1230 4176 1744 3 943 226 302 0 0 chr15 47031858 47031911 -56463063 - MTC-int LTR MaLR -722 536 484 3 943 13674 166 51 58 chr15 47031911 47032820 -56462154 - ETnERV2-int LTR ERVK -1230 1743 1059 3 943 515 16 0 15 chr15 47032897 47032962 -56462012 + (CTATT)n Simple_repeat Simple_repeat 2 65 0 3 943 1945 124 22 27 chr15 47033269 47033635 -56461339 - RLTR9A LTR ERVK 0 368 5 3 943 186 43 0 0 chr15 47035552 47035575 -56459399 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 943 445 234 0 11 chr15 47035950 47036045 -56458929 + PB1D9 SINE Alu 1 94 -26 3 943 228 263 0 0 chr15 47036090 47036166 -56458808 + GA-rich Low_complexity Low_complexity 5 80 0 3 943 284 268 26 66 chr15 47036805 47036957 -56458017 + (CAGAGA)n Simple_repeat Simple_repeat 2 147 0 3 943 307 139 31 47 chr15 47036962 47037090 -56457884 + (TATAA)n Simple_repeat Simple_repeat 4 129 0 3 943 297 0 0 0 chr15 47038465 47038498 -56456476 + (TC)n Simple_repeat Simple_repeat 2 34 0 4 943 21 36 0 0 chr15 47038760 47038788 -56456186 + AT_rich Low_complexity Low_complexity 1 28 0 4 943 371 56 19 0 chr15 47039390 47039444 -56455530 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 4 943 35 83 0 0 chr15 47039677 47039761 -56455213 + AT_rich Low_complexity Low_complexity 1 84 0 4 943 219 36 0 0 chr15 47040022 47040050 -56454924 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 4 943 360 270 36 14 chr15 47040370 47040509 -56454465 - Lx9 LINE L1 0 7644 7503 4 943 612 40 0 0 chr15 47040512 47040587 -56454387 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 4 943 246 250 137 8 chr15 47040816 47040933 -56454041 + L1MA7 LINE L1 6116 6247 -44 4 943 3897 199 31 20 chr15 47040997 47042109 -56452865 - L1_Mur1 LINE L1 -4432 1454 60 4 943 2018 174 3 0 chr15 47042119 47042458 -56452516 + Lx3B LINE L1 6537 6876 -97 4 943 216 0 0 0 chr15 47042617 47042641 -56452333 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 5 943 234 341 34 0 chr15 47043873 47043961 -56451013 - MIRb SINE MIR -31 237 147 5 943 399 338 109 71 chr15 47044019 47044442 -56450532 - MLT1D LTR MaLR -13 492 54 5 943 337 184 0 54 chr15 47045190 47045273 -56449701 - Lx3B LINE L1 0 6981 6900 5 943 2760 57 2 75 chr15 47045273 47045689 -56449285 - RLTR10 LTR ERVK -4 386 1 5 943 7776 39 25 3 chr15 47045698 47046665 -56448309 - RLTR10-int LTR ERVK -10 1977 990 5 943 351 232 62 39 chr15 47046747 47046877 -56448097 - MMERVK10C-int LTR ERVK -5987 1594 1462 5 943 1727 150 131 9 chr15 47046877 47047220 -56447754 - Lx3B LINE L1 -1002 5971 5587 5 943 7818 169 18 8 chr15 47047235 47049162 -56445812 + L1_Mus3 LINE L1 4500 7036 -22 5 943 25 31 0 0 chr15 47049257 47049289 -56445685 + AT_rich Low_complexity Low_complexity 1 32 0 5 943 21 36 0 0 chr15 47050604 47050632 -56444342 + AT_rich Low_complexity Low_complexity 1 28 0 5 943 258 232 9 116 chr15 47051150 47051262 -56443712 - L1_Mur3 LINE L1 -1146 4734 4635 6 943 489 209 0 0 chr15 47051469 47051617 -56443357 + (TA)n Simple_repeat Simple_repeat 1 148 0 6 943 252 0 0 0 chr15 47051618 47051646 -56443328 + (GA)n Simple_repeat Simple_repeat 2 29 0 6 943 3378 210 72 3 chr15 47051647 47052755 -56442219 - Lx4B LINE L1 -573 6485 5306 6 943 3924 178 137 10 chr15 47052750 47052769 -56442205 - Lx4B LINE L1 -1127 4750 4732 6 943 213 39 0 0 chr15 47052769 47052795 -56442179 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 943 3924 178 137 10 chr15 47052795 47053693 -56441281 - Lx4B LINE L1 -1146 4731 3716 6 943 5131 210 17 52 chr15 47053660 47053831 -56441143 - Lx4B LINE L1 -3274 2603 2448 6 943 465 19 0 0 chr15 47053831 47053885 -56441089 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 6 117 5131 216 24 45 chr15 47053885 47055474 -56439500 - Lx4B LINE L1 -3430 2447 879 6 944 331 304 81 8 chr15 47055835 47055994 -56438980 - L1MA7 LINE L1 -211 5969 5797 6 944 232 184 0 136 chr15 47056117 47056205 -56438769 - L1MA7 LINE L1 -768 5378 5303 6 944 375 338 0 0 chr15 47056261 47056412 -56438562 - L1MA7 LINE L1 -1054 5086 4936 6 944 324 279 36 58 chr15 47056480 47056617 -56438357 - L1MA7 LINE L1 -1213 4930 4797 6 944 340 314 87 34 chr15 47056675 47056883 -56438091 - L1MA7 LINE L1 -1343 4800 4582 6 944 273 359 0 0 chr15 47057763 47057841 -56437133 - ID4 SINE ID -4 79 2 6 944 26 0 0 0 chr15 47057886 47057912 -56437062 + AT_rich Low_complexity Low_complexity 1 26 0 6 944 230 386 39 29 chr15 47058252 47058356 -56436618 - PB1D10 SINE Alu -12 105 1 6 944 432 0 0 0 chr15 47059180 47059228 -56435746 + (TA)n Simple_repeat Simple_repeat 2 49 0 7 944 21 0 0 0 chr15 47059489 47059510 -56435464 + AT_rich Low_complexity Low_complexity 1 21 0 7 944 397 336 129 41 chr15 47059872 47060189 -56434785 - ORR1E LTR MaLR -2 357 13 7 944 180 111 0 0 chr15 47060788 47060815 -56434159 + (T)n Simple_repeat Simple_repeat 1 27 0 7 944 24 32 0 0 chr15 47060823 47060854 -56434120 + AT_rich Low_complexity Low_complexity 1 31 0 7 944 295 220 17 0 chr15 47061470 47061529 -56433445 + RMER15 LTR ERVL 1 60 -515 7 944 664 278 4 44 chr15 47061546 47061772 -56433202 - L1_Mur2 LINE L1 -701 5176 4960 7 944 2565 124 21 71 chr15 47061771 47062247 -56432727 + Lx2 LINE L1 5692 6143 -854 7 944 1227 186 29 29 chr15 47062319 47062562 -56432412 + Lx4A LINE L1 6813 7055 -3 7 944 24 0 0 0 chr15 47062562 47062586 -56432388 + AT_rich Low_complexity Low_complexity 1 24 0 7 944 1297 241 21 93 chr15 47062588 47063169 -56431805 + L1_Mur3 LINE L1 1344 1882 -3998 8 944 5207 217 99 199 chr15 47063173 47063626 -56431348 + L1_Mur3 LINE L1 2385 2862 -3018 8 944 799 96 168 0 chr15 47063626 47063751 -56431223 + B1_Mus1 SINE Alu 3 148 0 8 944 5207 217 99 199 chr15 47063751 47064637 -56430337 + L1_Mur3 LINE L1 2863 3690 -2190 8 944 1919 143 6 67 chr15 47064637 47064798 -56430176 - ORR1A2 LTR MaLR -1 326 164 8 944 2071 53 0 0 chr15 47064798 47065061 -56429913 + L1Md_A LINE L1 6320 6582 0 8 944 1919 143 6 67 chr15 47065061 47065244 -56429730 - ORR1A2 LTR MaLR -164 163 3 8 944 5207 217 99 199 chr15 47065244 47065715 -56429259 + L1_Mur3 LINE L1 3691 3966 -1914 8 944 5564 126 84 11 chr15 47065715 47066606 -56428368 + RMER17B LTR ERVK 3 958 0 8 944 5207 217 99 199 chr15 47066606 47067813 -56427161 + L1_Mur3 LINE L1 3967 5411 -469 8 944 3751 119 104 144 chr15 47067813 47068757 -56426217 - RMER17A2 LTR ERVK 0 906 1 8 944 5207 217 99 199 chr15 47068757 47068790 -56426184 + L1_Mur3 LINE L1 5412 5441 -439 8 944 425 133 0 13 chr15 47068786 47068862 -56426112 - Lx3_Mus LINE L1 -519 6490 6416 8 944 357 82 0 0 chr15 47069465 47069514 -56425460 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 944 440 333 147 44 chr15 47069533 47069853 -56425121 - RLTR9A LTR ERVK -8 360 8 8 944 21 57 0 0 chr15 47069853 47069888 -56425086 + AT_rich Low_complexity Low_complexity 1 35 0 9 944 3677 152 15 38 chr15 47069890 47070547 -56424427 - RLTR26 LTR ERVK 0 642 1 9 944 11042 124 12 6 chr15 47070550 47072144 -56422830 - MERVK26-int LTR ERVK -1 6918 5315 9 944 13980 106 4 1 chr15 47072140 47074071 -56420903 - MERVK26-int LTR ERVK -2969 3950 2015 9 944 700 87 39 0 chr15 47074071 47074175 -56420799 - L1_Mus2 LINE L1 -776 5862 5755 9 944 4874 85 13 30 chr15 47074175 47074880 -56420094 + L1_Mus2 LINE L1 5874 6566 0 9 944 21 36 0 0 chr15 47074898 47074926 -56420048 + AT_rich Low_complexity Low_complexity 1 28 0 9 944 823 65 0 0 chr15 47074926 47075033 -56419941 - MERVK26-int LTR ERVK -4894 2025 1919 9 944 429 20 0 0 chr15 47075036 47075086 -56419888 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 944 952 250 65 82 chr15 47075091 47075442 -56419532 - RLTR20C LTR ERVK -251 317 10 9 944 1544 256 43 23 chr15 47075439 47075878 -56419096 - RMER20A LTR ERVK -68 448 1 9 944 35 54 0 0 chr15 47075914 47075970 -56419004 + AT_rich Low_complexity Low_complexity 1 56 0 9 944 683 281 24 34 chr15 47076214 47076420 -56418554 - RMER15 LTR ERVL -22 553 350 9 944 591 190 60 0 chr15 47076423 47076539 -56418435 + ETnERV2-int LTR ERVK 7070 7192 -214 9 944 481 269 35 191 chr15 47076947 47077287 -56417687 - RMER15 LTR ERVL -237 338 52 9 944 30 59 0 0 chr15 47077425 47077476 -56417498 + AT_rich Low_complexity Low_complexity 1 51 0 1 944 513 84 0 0 chr15 47077785 47077856 -56417118 + (TG)n Simple_repeat Simple_repeat 1 71 0 1 944 326 357 62 31 chr15 47077860 47077990 -56416984 - B4 SINE B4 -16 276 143 1 944 225 0 0 0 chr15 47078066 47078091 -56416883 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1 944 535 305 63 10 chr15 47079074 47079279 -56415695 - B3 SINE B2 0 216 1 1 944 392 37 19 0 chr15 47080037 47080091 -56414883 + (TTCC)n Simple_repeat Simple_repeat 1 55 0 1 944 675 136 0 0 chr15 47080763 47080873 -56414101 + (TA)n Simple_repeat Simple_repeat 2 111 0 1 944 35307 37 0 0 chr15 47081274 47086607 -56408367 + L1Md_T LINE L1 160 5589 -297 1 944 8790 13 0 1 chr15 47086607 47087604 -56407370 + L1Md_T LINE L1 5590 6585 0 1 944 1937 175 11 6 chr15 47087622 47087979 -56406995 + RLTR15 LTR ERVK 1 359 0 1 944 317 395 44 6 chr15 47088812 47088970 -56406004 + B3A SINE B2 5 168 -30 1 944 378 61 0 0 chr15 47089085 47089134 -56405840 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 944 453 381 6 24 chr15 47089365 47089529 -56405445 - RSINE1 SINE B4 0 165 5 1 944 7375 125 34 2 chr15 47090325 47091393 -56403581 - Lx3_Mus LINE L1 0 7009 5904 1 944 891 75 0 0 chr15 47091393 47091513 -56403461 + (TTTC)n Simple_repeat Simple_repeat 1 120 0 1 944 7375 125 34 2 chr15 47091513 47091646 -56403328 - Lx3_Mus LINE L1 -1106 5903 5771 1 944 4664 109 53 9 chr15 47091646 47092379 -56402595 + Lx3_Mus LINE L1 5019 5783 -103 1 944 462 211 0 0 chr15 47092409 47092518 -56402456 + (TA)n Simple_repeat Simple_repeat 1 109 0 1 944 1182 48 0 0 chr15 47092717 47092862 -56402112 - B1_Mm SINE Alu 0 147 3 1 944 304 309 10 10 chr15 47093009 47093109 -56401865 - ID4_ SINE ID -41 111 12 1 944 1040 275 50 11 chr15 47093193 47093454 -56401520 + Lx6 LINE L1 6915 7185 -275 1 944 1179 318 54 2 chr15 47094555 47095000 -56399974 + MT2A LTR ERVL 65 532 -1 1 944 1319 168 4 20 chr15 47095055 47095304 -56399670 + Lx4A LINE L1 6814 7058 0 1 944 359 17 32 32 chr15 47095993 47096055 -56398919 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 944 28 0 0 0 chr15 47096128 47096156 -56398818 + AT_rich Low_complexity Low_complexity 1 28 0 1 944 1090 55 0 0 chr15 47096183 47096329 -56398645 - L1Md_A LINE L1 0 6582 6437 1 944 6933 35 0 62 chr15 47096328 47097241 -56397733 + L1Md_F2 LINE L1 5711 6566 -16 1 944 459 0 0 0 chr15 47097241 47097292 -56397682 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 944 4350 96 5 10 chr15 47097301 47097914 -56397060 + L1_Mus2 LINE L1 5956 6565 -1 1 944 24 0 0 0 chr15 47097914 47097938 -56397036 + AT_rich Low_complexity Low_complexity 1 24 0 1 944 203 0 37 0 chr15 47098153 47098180 -56396794 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 1 944 266 232 20 59 chr15 47098531 47098632 -56396342 - MLT1B LTR MaLR -236 154 58 1 944 638 310 33 62 chr15 47101282 47101503 -56393471 + Lx8 LINE L1 7052 7266 -207 1 944 7415 12 0 0 chr15 47101503 47102325 -56392649 - RLTR13B2 LTR ERVK 0 822 1 1 944 638 310 33 62 chr15 47102325 47102347 -56392627 + Lx8 LINE L1 7267 7288 -185 1 944 357 43 0 0 chr15 47102347 47102394 -56392580 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 944 399 41 0 0 chr15 47102712 47102761 -56392213 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 944 916 0 8 26 chr15 47103515 47103632 -56391342 + (TCTA)n Simple_repeat Simple_repeat 4 118 0 1 944 369 304 29 15 chr15 47104632 47104769 -56390205 + LTR33 LTR ERVL 375 513 -2 1 944 237 83 0 0 chr15 47105013 47105049 -56389925 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 1 944 23 33 0 0 chr15 47105308 47105338 -56389636 + AT_rich Low_complexity Low_complexity 1 30 0 1 944 180 248 151 62 chr15 47106667 47106813 -56388161 + L3 LINE CR1 998 1156 -3333 1 944 464 48 0 16 chr15 47107674 47107738 -56387236 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 944 519 17 0 0 chr15 47107747 47107807 -56387167 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 944 1510 293 88 81 chr15 47107898 47108196 -56386778 - Lx5 LINE L1 -694 6356 6071 1 944 1109 62 7 14 chr15 47108196 47108344 -56386630 - B1_Mm SINE Alu 0 147 1 1 944 2030 219 88 67 chr15 47108344 47109117 -56385857 - Lx5 LINE L1 -980 6070 5245 1 944 2419 211 39 31 chr15 47109103 47109714 -56385260 - Lx5 LINE L1 -983 4897 4282 1 944 225 243 0 0 chr15 47110064 47110134 -56384840 + (CA)n Simple_repeat Simple_repeat 2 71 0 1 944 3454 119 28 7 chr15 47110392 47110935 -56384039 - Lx3A LINE L1 -215 6766 6213 1 944 4648 59 0 5 chr15 47111082 47111675 -56383299 - L1Md_F2 LINE L1 -2 6580 5991 1 944 1207 44 0 0 chr15 47111676 47111834 -56383140 + L1_Mm LINE L1 3608 3765 -2118 1 944 2321 115 10 141 chr15 47111828 47112411 -56382563 - Lx3A LINE L1 -764 6245 5779 1 944 1060 90 7 0 chr15 47112411 47112556 -56382418 - B1_Mus2 SINE Alu 0 147 2 1 944 1375 143 0 1 chr15 47112556 47112760 -56382214 - Lx3A LINE L1 -1212 5797 5589 1 944 1303 220 81 65 chr15 47113135 47113655 -56381319 + RLTR11A LTR ERVK 1 528 0 1 944 363 136 0 63 chr15 47115311 47115374 -56379600 + HAL1-3A_ME LINE L1 1975 2033 -825 1 944 384 22 0 0 chr15 47115634 47115679 -56379295 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 1 944 258 221 44 0 chr15 47115782 47115850 -56379124 - Lx9 LINE L1 -196 7448 7378 1 944 253 219 79 42 chr15 47115986 47116093 -56378881 + L1MA6 LINE L1 6106 6218 -85 1 944 2184 100 65 6 chr15 47117296 47117649 -56377325 + L1_Mus3 LINE L1 6263 6636 -2 1 944 24 0 0 0 chr15 47117924 47117948 -56377026 + AT_rich Low_complexity Low_complexity 1 24 0 1 944 3438 152 16 3 chr15 47118235 47118811 -56376163 - Lx2B LINE L1 -4 6996 6414 1 944 3258 222 24 51 chr15 47118837 47119636 -56375338 + RLTR40 LTR ERVK 38 814 -3 1 944 605 293 74 82 chr15 47120834 47121343 -56373631 - RMER2 LTR ERV1 -29 538 3 1 944 743 305 111 16 chr15 47121930 47122246 -56372728 + MTE2b LTR MaLR 34 379 0 1 944 660 334 122 20 chr15 47122247 47122601 -56372373 + MTE2b-int LTR MaLR 3 392 -1188 1 944 2100 337 94 36 chr15 47122580 47123586 -56371388 + MTE2b-int LTR MaLR 516 1580 0 1 944 1267 293 21 39 chr15 47123586 47123970 -56371004 + MTE2b LTR MaLR 1 377 -2 1 944 410 348 9 0 chr15 47124225 47124340 -56370634 + ID_B1 SINE B4 80 195 -29 1 944 346 302 204 11 chr15 47124409 47124600 -56370374 - MTEb LTR MaLR -8 371 144 1 944 1603 21 0 0 chr15 47124684 47124875 -56370099 - MT2_Mm LTR ERVL 0 493 303 1 944 405 219 75 38 chr15 47126286 47126419 -56368555 - Lx7 LINE L1 0 7696 7559 1 944 723 217 111 5 chr15 47126413 47126603 -56368371 - L1_Mur3 LINE L1 -1461 4419 4210 1 944 1279 206 14 14 chr15 47126592 47126883 -56368091 - L1_Mur3 LINE L1 -3240 2640 2350 1 944 336 293 108 44 chr15 47126915 47127078 -56367896 - RMER20B LTR ERVK -38 478 295 1 944 423 0 0 0 chr15 47127078 47127125 -56367849 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 944 320 282 127 55 chr15 47127125 47127154 -56367820 - RMER20B LTR ERVK -333 294 274 1 944 1729 173 34 9 chr15 47127154 47127475 -56367499 - ORR1A4 LTR MaLR 0 329 1 1 944 453 315 92 80 chr15 47127480 47127742 -56367232 - RMER20B LTR ERVK -362 265 1 1 944 1196 180 34 169 chr15 47127742 47127850 -56367124 - L1_Mur3 LINE L1 -3523 2357 2263 1 944 2659 93 36 15 chr15 47127850 47128242 -56366732 - MTB LTR MaLR 0 400 1 1 944 1196 180 34 169 chr15 47128242 47128660 -56366314 - L1_Mur3 LINE L1 -3618 2262 1902 1 944 525 94 0 0 chr15 47129979 47130064 -56364910 + (TG)n Simple_repeat Simple_repeat 2 86 0 1 944 1159 61 0 7 chr15 47130214 47130362 -56364612 - B1_Mm SINE Alu 0 147 1 1 944 39 38 0 0 chr15 47130530 47130583 -56364391 + AT_rich Low_complexity Low_complexity 1 53 0 1 944 1152 191 34 0 chr15 47130594 47130830 -56364144 - Lx5 LINE L1 -1041 6009 5766 1 944 244 273 52 22 chr15 47130829 47130964 -56364010 + Lx5 LINE L1 6031 6169 -881 1 944 241 184 0 0 chr15 47131036 47131074 -56363900 - Lx5 LINE L1 -300 5577 5540 1 944 21 57 0 0 chr15 47131226 47131261 -56363713 + AT_rich Low_complexity Low_complexity 1 35 0 1 944 23 54 0 0 chr15 47132275 47132312 -56362662 + AT_rich Low_complexity Low_complexity 1 37 0 1 944 1279 175 179 0 chr15 47132619 47132916 -56362058 - RMER6C LTR ERVK 0 690 341 1 944 276 244 0 24 chr15 47132958 47133042 -56361932 + A-rich Low_complexity Low_complexity 1 82 0 1 944 382 164 0 0 chr15 47133073 47133140 -56361834 - ORR1A3 LTR MaLR 0 326 260 1 944 2227 151 99 5 chr15 47133142 47133568 -56361406 + RMER17B LTR ERVK 430 895 -63 1 944 2056 148 0 0 chr15 47133568 47133919 -56361055 + L1VL4 LINE L1 624 974 -5328 1 944 811 199 6 6 chr15 47133919 47134091 -56360883 - Lx5 LINE L1 -1920 3957 3786 1 944 855 94 0 45 chr15 47134099 47134233 -56360741 - B1_Mus1 SINE Alu -20 128 1 1 944 461 236 80 46 chr15 47134233 47134246 -56360728 - B4 SINE B4 -67 221 70 1 944 311 219 21 10 chr15 47134256 47134353 -56360621 - Lx5 LINE L1 -3308 2578 2481 1 944 69 48 0 0 chr15 47134865 47134969 -56360005 + AT_rich Low_complexity Low_complexity 1 104 0 1 944 819 72 0 0 chr15 47134984 47135095 -56359879 + (TAGA)n Simple_repeat Simple_repeat 2 112 0 1 944 264 77 0 0 chr15 47135995 47136034 -56358940 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 944 21 36 0 0 chr15 47136640 47136668 -56358306 + AT_rich Low_complexity Low_complexity 1 28 0 1 944 263 339 18 18 chr15 47136698 47136809 -56358165 + MTD LTR MaLR 161 271 -148 1 944 329 267 23 0 chr15 47136958 47137044 -56357930 - URR1B DNA MER1_type -137 88 1 1 944 574 311 68 107 chr15 47137088 47137688 -56357286 + MTC-int LTR MaLR 315 996 -262 1 944 2926 227 44 23 chr15 47137705 47138537 -56356437 + L1_Mur2 LINE L1 1 706 -6006 1 944 2851 211 71 125 chr15 47138524 47139717 -56355257 + L1VL2 LINE L1 22 964 -5371 1 944 2055 199 92 38 chr15 47139717 47140249 -56354725 + RLTR31_Mm LTR ERVK 1 561 0 1 944 13803 130 28 9 chr15 47140249 47142847 -56352127 + L1_Mur3 LINE L1 1252 3875 -2005 1 944 18924 153 33 9 chr15 47142841 47146625 -56348349 - L1VL1 LINE L1 -1177 4706 836 1 944 225 0 0 0 chr15 47146625 47146650 -56348324 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1 944 4854 200 29 77 chr15 47146650 47147327 -56347647 - L1VL1 LINE L1 -5803 835 280 1 944 315 0 0 0 chr15 47147470 47147505 -56347469 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 944 1293 250 62 23 chr15 47148651 47148819 -56346155 + Lx6 LINE L1 7095 7266 -194 1 944 1200 106 0 0 chr15 47148819 47148998 -56345976 + (TTTTC)n Simple_repeat Simple_repeat 2 180 0 1 944 1293 250 62 23 chr15 47148998 47149181 -56345793 + Lx6 LINE L1 7267 7460 0 1 944 230 116 23 0 chr15 47149475 47149518 -56345456 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 944 243 0 0 0 chr15 47150157 47150184 -56344790 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 944 692 341 58 35 chr15 47150369 47150679 -56344295 - MTE2a LTR MaLR 0 379 63 1 944 24 85 0 0 chr15 47151149 47151208 -56343766 + AT_rich Low_complexity Low_complexity 1 59 0 1 944 261 0 0 0 chr15 47151281 47151310 -56343664 + (TC)n Simple_repeat Simple_repeat 2 30 0 2 944 459 0 0 0 chr15 47151327 47151378 -56343596 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 944 345 236 0 0 chr15 47153455 47153527 -56341447 + Lx5 LINE L1 6767 6838 -212 2 944 1084 246 12 17 chr15 47153580 47153820 -56341154 - RMER1B Other Other -268 798 560 2 944 1023 217 78 8 chr15 47153800 47154042 -56340932 + RMER1B Other Other 805 1063 -3 2 944 296 379 66 31 chr15 47155851 47156107 -56338867 - L2 LINE L2 -1685 1734 1470 2 944 243 0 0 0 chr15 47156221 47156248 -56338726 + (A)n Simple_repeat Simple_repeat 1 27 0 2 944 180 0 0 0 chr15 47156546 47156566 -56338408 + (A)n Simple_repeat Simple_repeat 1 20 0 2 944 241 271 0 54 chr15 47156635 47156709 -56338265 + PB1D7 SINE Alu 51 120 0 2 944 34 42 0 0 chr15 47159050 47159098 -56335876 + AT_rich Low_complexity Low_complexity 1 48 0 2 944 24 53 0 0 chr15 47159978 47160016 -56334958 + AT_rich Low_complexity Low_complexity 1 38 0 2 944 21 0 0 0 chr15 47160141 47160162 -56334812 + AT_rich Low_complexity Low_complexity 1 21 0 2 944 1722 144 18 21 chr15 47161229 47161555 -56333419 - Lx2 LINE L1 0 6997 6673 2 944 34 0 0 0 chr15 47163081 47163115 -56331859 + AT_rich Low_complexity Low_complexity 1 34 0 2 944 2135 132 0 3 chr15 47163305 47163623 -56331351 - L1_Mur1 LINE L1 -4 5882 5566 2 944 221 341 34 0 chr15 47163642 47163730 -56331244 + RSINE1 SINE B4 4 94 -71 2 944 11772 160 75 11 chr15 47164507 47167755 -56327219 - L1_Mur3 LINE L1 -771 5109 1433 2 944 1697 137 77 48 chr15 47167751 47168088 -56326886 - L1VL2 LINE L1 -5754 581 235 2 944 785 170 31 6 chr15 47168088 47168248 -56326726 + Lx LINE L1 6481 6644 -10 2 944 228 35 0 0 chr15 47168850 47168879 -56326095 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 944 262 299 45 45 chr15 47169260 47169393 -56325581 - L1MEd LINE L1 -5543 576 444 2 944 243 0 0 0 chr15 47169524 47169551 -56325423 + (GA)n Simple_repeat Simple_repeat 2 28 0 2 944 418 317 14 7 chr15 47170251 47170397 -56324577 + B1F SINE Alu 3 149 0 2 944 386 243 38 32 chr15 47170555 47170712 -56324262 + L1_Mur1 LINE L1 208 365 -6617 2 944 315 0 0 0 chr15 47170731 47170766 -56324208 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 944 835 60 12 16 chr15 47170766 47170885 -56324089 - B1_Mm SINE Alu -8 139 22 2 944 262 211 0 0 chr15 47170959 47171016 -56323958 + L1_Mur1 LINE L1 674 730 -6252 2 944 743 256 81 53 chr15 47171671 47171956 -56323018 + L1VL4 LINE L1 156 448 -5854 2 944 6267 98 43 1 chr15 47171954 47172932 -56322042 + Lx3_Mus LINE L1 4110 5128 -758 2 944 9055 106 65 11 chr15 47172899 47173419 -56321555 + Lx3_Mus LINE L1 5333 5908 -1101 2 944 1128 111 0 0 chr15 47173419 47173590 -56321384 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 2 944 411 21 0 0 chr15 47173592 47173640 -56321334 + (GAAAA)n Simple_repeat Simple_repeat 1 48 0 2 944 9055 97 26 7 chr15 47173640 47173762 -56321212 + Lx3_Mus LINE L1 5909 6031 -978 2 944 249 33 0 0 chr15 47173762 47173792 -56321182 + (GGGA)n Simple_repeat Simple_repeat 1 30 0 2 944 9055 97 26 7 chr15 47173792 47174734 -56320240 + Lx3_Mus LINE L1 6032 7005 -4 2 944 354 59 0 0 chr15 47174743 47174784 -56320190 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2 944 4567 142 25 88 chr15 47174784 47175746 -56319228 - RLTR13D6 LTR ERVK -1 901 1 2 944 354 59 0 0 chr15 47175746 47175755 -56319219 + (CAAAAA)n Simple_repeat Simple_repeat 1 9 0 2 944 825 342 74 24 chr15 47175975 47176219 -56318755 - Lx8 LINE L1 -372 7101 6830 2 944 1898 157 10 0 chr15 47176219 47176525 -56318449 - RLTR27 LTR ERVK 0 309 1 2 944 825 342 74 24 chr15 47176525 47177025 -56317949 - Lx8 LINE L1 -644 6829 6320 2 944 261 128 0 0 chr15 47177844 47177891 -56317083 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 944 29 28 0 0 chr15 47178263 47178299 -56316675 + AT_rich Low_complexity Low_complexity 1 36 0 2 944 22 0 0 0 chr15 47178779 47178801 -56316173 + AT_rich Low_complexity Low_complexity 1 22 0 2 944 542 330 38 38 chr15 47179043 47179282 -56315692 + ORR1D2 LTR MaLR 118 356 -14 2 944 405 0 0 0 chr15 47179575 47179620 -56315354 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 944 29 0 0 0 chr15 47180188 47180217 -56314757 + AT_rich Low_complexity Low_complexity 1 29 0 2 944 1075 78 7 21 chr15 47181006 47181151 -56313823 - B1_Mus1 SINE Alu -1 147 5 2 944 1883 162 16 83 chr15 47181162 47181546 -56313428 - ORR1B1 LTR MaLR -2 392 35 2 944 195 42 0 0 chr15 47181931 47181955 -56313019 + (CAA)n Simple_repeat Simple_repeat 1 24 0 2 944 1298 325 69 9 chr15 47182158 47182707 -56312267 - Lx5 LINE L1 0 7050 6469 2 944 22 35 0 0 chr15 47183511 47183540 -56311434 + AT_rich Low_complexity Low_complexity 1 29 0 2 944 507 328 80 37 chr15 47185064 47185415 -56309559 + ORR1D2 LTR MaLR 3 368 -2 2 945 225 88 0 0 chr15 47186246 47186280 -56308694 - L1MEc LINE L1 -5062 1338 1305 2 945 1245 241 79 50 chr15 47186347 47186766 -56308208 + RMER16 LTR ERVK 103 533 0 2 945 1662 189 37 23 chr15 47187063 47187500 -56307474 - RMER17C LTR ERVK -517 441 16 2 945 27 0 0 0 chr15 47188021 47188048 -56306926 + AT_rich Low_complexity Low_complexity 1 27 0 2 945 2774 27 0 0 chr15 47188057 47188392 -56306582 + IAPLTR1a_Mm LTR ERVK 1 335 -2 2 945 53003 22 9 17 chr15 47188392 47194918 -56300056 + IAPEz-int LTR ERVK 9 6481 0 2 945 2956 21 3 0 chr15 47194918 47195254 -56299720 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 945 3014 83 0 2 chr15 47195684 47196081 -56298893 - MTA_Mm LTR MaLR 0 396 1 2 945 1117 291 59 36 chr15 47196208 47196399 -56298575 - BLACKJACK DNA AcHobo -1616 1328 1125 2 945 245 89 0 22 chr15 47196399 47196445 -56298529 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 945 1117 291 59 36 chr15 47196445 47196859 -56298115 - BLACKJACK DNA AcHobo -1820 1124 709 2 945 1228 62 6 0 chr15 47198082 47198244 -56296730 - L1_Mus1 LINE L1 0 6567 6405 2 945 1293 224 35 60 chr15 47198278 47198563 -56296411 - RLTR41 LTR ERV1 0 446 169 2 945 586 101 9 9 chr15 47198705 47198815 -56296159 + RLTR1B-int LTR ERV1 1021 1130 -2169 2 945 313 183 523 0 chr15 47198829 47198963 -56296011 + RLTR1B-int LTR ERV1 1442 1645 -5911 2 945 537 16 0 0 chr15 47199094 47199156 -56295818 + (GA)n Simple_repeat Simple_repeat 1 62 0 2 945 6613 86 96 144 chr15 47199156 47200618 -56294356 + RLTR1B-int LTR ERV1 1221 2612 -687 2 945 8342 23 7 1 chr15 47200626 47201596 -56293378 - RLTR13A3 LTR ERVK -2 976 1 2 945 43967 40 9 11 chr15 47201602 47203399 -56291575 - ETnERV3-int LTR ERVK 0 5808 4010 2 945 189 94 0 0 chr15 47203399 47203431 -56291543 + (TTAA)n Simple_repeat Simple_repeat 2 33 0 2 945 43967 40 9 11 chr15 47203431 47207452 -56287522 - ETnERV3-int LTR ERVK -1799 4009 3 2 945 8335 24 7 1 chr15 47207454 47208424 -56286550 - RLTR13A3 LTR ERVK -2 976 1 2 945 3632 91 27 88 chr15 47208435 47209073 -56285901 + RLTR1B-int LTR ERV1 2624 3222 -77 2 945 501 118 3 13 chr15 47209085 47209220 -56285754 + RLTR1B-int LTR ERV1 3231 3299 0 2 945 1487 261 38 40 chr15 47209221 47209689 -56285285 + RLTR1B LTR ERV1 50 512 0 2 945 360 318 46 0 chr15 47209694 47209867 -56285107 - RLTR6-int LTR ERV1 -305 7296 7116 2 945 1146 78 0 0 chr15 47209894 47210036 -56284938 - B1_Mus1 SINE Alu -6 142 1 2 945 330 236 56 19 chr15 47210800 47210908 -56284066 - RLTR6-int LTR ERV1 -1261 6295 6184 2 945 573 344 67 58 chr15 47211400 47211863 -56283111 - MuRRS4-int LTR ERV1 -735 4328 3862 2 945 21 0 0 0 chr15 47211863 47211884 -56283090 + AT_rich Low_complexity Low_complexity 1 21 0 2 945 6136 33 0 0 chr15 47211908 47212627 -56282347 - L1Md_T LINE L1 0 6582 5864 2 945 5403 23 0 0 chr15 47212627 47213284 -56281690 + L1Md_T LINE L1 5227 5883 0 2 945 2075 335 44 69 chr15 47213284 47215792 -56279182 - RLTR6-int LTR ERV1 -2535 5243 2800 2 945 236 257 126 19 chr15 47215919 47216022 -56278952 - MLT1F2 LTR MaLR -31 529 416 2 945 1270 319 68 56 chr15 47216024 47217260 -56277714 - RLTR6-int LTR ERV1 -5191 2415 1165 2 945 301 287 24 24 chr15 47217690 47217815 -56277159 - RLTR6-int LTR ERV1 -6959 642 518 2 945 208 53 26 26 chr15 47218102 47218141 -56276833 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 945 738 156 131 0 chr15 47218141 47218263 -56276711 - B1_Mus1 SINE Alu -10 138 1 2 945 991 224 83 166 chr15 47218487 47218968 -56276006 - RLTR41 LTR ERV1 -1 445 5 2 945 840 101 0 0 chr15 47219108 47219246 -56275728 + (CA)n Simple_repeat Simple_repeat 1 138 0 2 945 225 0 0 0 chr15 47219588 47219613 -56275361 + (A)n Simple_repeat Simple_repeat 1 25 0 2 945 21 36 0 0 chr15 47219640 47219668 -56275306 + AT_rich Low_complexity Low_complexity 1 28 0 2 945 786 232 7 98 chr15 47220628 47220915 -56274059 + L1_Mur1 LINE L1 8 268 -6716 2 945 13384 121 60 10 chr15 47220962 47222366 -56272608 + L1_Mur1 LINE L1 676 2157 -3729 2 945 1923 49 0 12 chr15 47222366 47222616 -56272358 + L1Md_F2 LINE L1 6324 6570 -12 2 945 13384 118 8 12 chr15 47222616 47223812 -56271162 + L1_Mur1 LINE L1 2158 3342 -2544 2 945 1173 48 0 7 chr15 47223812 47223960 -56271014 + L1_Mus1 LINE L1 6168 6314 -253 2 945 360 75 0 0 chr15 47223960 47224013 -56270961 + L1_Mus2 LINE L1 6502 6554 -12 2 945 11464 61 0 3 chr15 47224013 47225481 -56269493 - L1_Mm LINE L1 -949 4934 3470 2 945 2199 35 0 0 chr15 47225473 47225731 -56269243 + L1Md_F2 LINE L1 5329 5586 -297 2 945 8063 46 4 0 chr15 47225731 47226711 -56268263 + L1Md_F2 LINE L1 5587 6570 -12 2 945 7471 112 24 4 chr15 47226756 47227945 -56267029 + L1_Mur1 LINE L1 3329 4541 -1345 2 945 21 0 0 0 chr15 47228363 47228384 -56266590 + AT_rich Low_complexity Low_complexity 1 21 0 2 945 225 163 0 0 chr15 47228809 47228858 -56266116 + (TTG)n Simple_repeat Simple_repeat 2 50 0 2 945 2392 266 169 25 chr15 47228923 47229807 -56265167 - ORR1B2-int LTR MaLR -306 1064 59 2 945 5989 210 55 11 chr15 47229816 47231500 -56263474 - Lx5 LINE L1 -1 7049 5287 2 945 297 0 0 0 chr15 47231500 47231533 -56263441 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 2 945 4030 174 41 8 chr15 47231533 47231701 -56263273 - Lx5 LINE L1 -591 5286 5097 2 945 4882 130 90 12 chr15 47231701 47232526 -56262448 - L1_Mus3 LINE L1 -6 6632 5744 2 945 5106 124 10 0 chr15 47232526 47233293 -56261681 + L1_Mus3 LINE L1 4987 5761 -122 2 945 5267 229 12 38 chr15 47233289 47234453 -56260521 - Lx5 LINE L1 -771 5115 3984 2 945 558 0 0 0 chr15 47234453 47234515 -56260459 + (TTTTG)n Simple_repeat Simple_repeat 4 65 0 2 945 1133 71 0 0 chr15 47234517 47234658 -56260316 - B1_Mus2 SINE Alu -6 141 1 2 945 5267 229 12 38 chr15 47234658 47234916 -56260058 - Lx5 LINE L1 -1903 3983 3727 2 945 251 232 0 0 chr15 47234927 47234983 -56259991 - ORR1B2-int LTR MaLR -1305 65 10 2 945 1342 248 38 44 chr15 47234994 47235361 -56259613 - ORR1B2 LTR MaLR -2 365 1 2 945 477 338 60 38 chr15 47235915 47236284 -56258690 - L1M4c LINE L1 -5309 1075 699 2 945 262 304 77 22 chr15 47236284 47236506 -56258468 - L1M4c LINE L1 -5654 730 497 2 945 1064 99 7 0 chr15 47236651 47236793 -56258181 - B1_Mus1 SINE Alu -4 144 2 2 945 1895 41 12 8 chr15 47236880 47237125 -56257849 + L1Md_A LINE L1 6337 6582 0 2 945 22 35 0 0 chr15 47237299 47237328 -56257646 + AT_rich Low_complexity Low_complexity 1 29 0 2 945 6979 171 14 16 chr15 47237361 47238235 -56256739 - Lx2 LINE L1 0 6997 6118 2 945 3065 38 7 82 chr15 47238235 47238663 -56256311 - MTA_Mm LTR MaLR 0 396 1 2 945 8340 188 27 29 chr15 47238663 47240836 -56254138 - Lx2 LINE L1 -880 6117 4020 2 945 4849 161 75 25 chr15 47240963 47241876 -56253098 - RMER17B LTR ERVK 0 958 1 2 945 661 275 38 19 chr15 47242734 47243005 -56251969 + L1_Mur3 LINE L1 2180 2475 -3372 2 945 198 174 0 0 chr15 47243009 47243055 -56251919 + (TTATA)n Simple_repeat Simple_repeat 5 50 0 2 945 435 38 0 0 chr15 47243280 47243333 -56251641 + (CTA)n Simple_repeat Simple_repeat 1 53 0 3 945 2010 233 106 6 chr15 47243334 47243844 -56251130 - Lx2B LINE L1 -21 6979 6419 3 945 575 27 14 0 chr15 47244493 47244566 -56250408 + (TA)n Simple_repeat Simple_repeat 2 75 0 3 945 7399 216 90 12 chr15 47245002 47246139 -56248835 + Lx2B LINE L1 804 1970 -3916 3 945 246 32 0 0 chr15 47246139 47246170 -56248804 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 3 945 7399 192 90 11 chr15 47246170 47247691 -56247283 + Lx2B LINE L1 1971 3370 -2516 3 945 5356 214 47 32 chr15 47247707 47249134 -56245840 + Lx2B LINE L1 5521 6995 -5 3 945 325 109 31 0 chr15 47249337 47249401 -56245573 + (TA)n Simple_repeat Simple_repeat 2 67 0 3 945 1096 79 0 0 chr15 47251318 47251457 -56243517 + B1_Mus1 SINE Alu 3 141 -7 3 945 711 0 0 0 chr15 47251459 47251538 -56243436 + (GA)n Simple_repeat Simple_repeat 1 79 0 3 945 3430 177 33 5 chr15 47251920 47252550 -56242424 - Lx2 LINE L1 -1 6996 6349 3 945 276 102 0 75 chr15 47252550 47252603 -56242371 - Lx2B LINE L1 -537 6463 6415 3 945 345 47 0 0 chr15 47252774 47252817 -56242157 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 945 1139 90 0 0 chr15 47252817 47252961 -56242013 - B1_Mus2 SINE Alu -3 144 1 3 945 24 0 0 0 chr15 47253272 47253296 -56241678 + AT_rich Low_complexity Low_complexity 1 24 0 3 945 826 345 49 44 chr15 47254686 47254730 -56240244 - Lx9 LINE L1 -241 7403 7359 3 945 2729 87 42 10 chr15 47254730 47255138 -56239836 - BGLII LTR ERVK 0 421 1 3 945 826 345 49 44 chr15 47255138 47255688 -56239286 - Lx9 LINE L1 -286 7358 6806 3 945 1146 228 62 37 chr15 47255698 47256021 -56238953 - RMER6C LTR ERVK 0 690 360 3 945 1218 185 0 30 chr15 47256006 47256240 -56238734 - RMER6C LTR ERVK -463 227 1 3 945 2057 158 29 16 chr15 47256240 47256625 -56238349 - RMER6-int LTR ERVK 0 3177 2788 3 945 450 127 0 0 chr15 47256691 47256762 -56238212 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 945 31 0 0 0 chr15 47256829 47256860 -56238114 + AT_rich Low_complexity Low_complexity 1 31 0 3 945 3942 194 68 7 chr15 47257800 47258775 -56236199 - Lx2B LINE L1 -519 6481 5444 3 945 8084 45 1 2 chr15 47258766 47260032 -56234942 - L1Md_F2 LINE L1 0 6582 5317 3 945 3033 70 0 5 chr15 47260027 47260429 -56234545 + L1Md_F2 LINE L1 4916 5315 -568 3 945 239 273 0 25 chr15 47260730 47260809 -56234165 + (CATATA)n Simple_repeat Simple_repeat 2 78 0 3 945 343 378 51 0 chr15 47261006 47261162 -56233812 + MER2B DNA MER2_type 2 165 -171 3 945 355 344 68 5 chr15 47261273 47261463 -56233511 + MER2 DNA MER2_type 89 290 -55 3 945 538 267 13 27 chr15 47261723 47261873 -56233101 + B1_Mur1 SINE Alu 1 148 -1 3 945 692 308 122 37 chr15 47262203 47262530 -56232444 + MTD LTR MaLR 51 405 -14 3 945 743 302 123 33 chr15 47262591 47262981 -56231993 + Tigger7 DNA MER2_type 188 612 -1879 3 945 257 321 24 0 chr15 47262959 47263043 -56231931 + Tigger7 DNA MER2_type 2392 2477 -14 3 945 27 0 0 0 chr15 47263106 47263133 -56231841 + AT_rich Low_complexity Low_complexity 1 27 0 3 945 255 250 59 12 chr15 47263308 47263393 -56231581 + MTEb LTR MaLR 270 358 -21 3 945 356 266 62 27 chr15 47264306 47264418 -56230556 + MLT1A1 LTR MaLR 291 406 -2 3 945 36 0 0 0 chr15 47264460 47264496 -56230478 + AT_rich Low_complexity Low_complexity 1 36 0 3 945 23 0 0 0 chr15 47264528 47264551 -56230423 + AT_rich Low_complexity Low_complexity 1 23 0 3 945 444 263 144 11 chr15 47265078 47265222 -56229752 - ID_B1 SINE B4 -45 247 87 3 945 4968 138 24 2 chr15 47265653 47266447 -56228527 + Lx2 LINE L1 6187 6997 0 3 945 233 229 49 0 chr15 47266496 47266557 -56228417 + L1M5 LINE L1 5675 5738 -386 3 945 491 306 126 16 chr15 47267061 47267244 -56227730 - MLT1G3 LTR MaLR -7 588 386 3 945 3562 172 85 14 chr15 47269129 47269997 -56224977 + MYSERV16_I-int LTR ERVK 1395 2324 -2 3 945 1317 270 40 34 chr15 47269999 47270501 -56224473 + RLTR16 LTR ERVK 1 505 0 3 945 17227 171 19 36 chr15 47270836 47275699 -56219275 - Lx2 LINE L1 0 6997 2226 3 945 2023 103 9 45 chr15 47275700 47276034 -56218940 + RLTRETN_Mm LTR ERVK 1 322 0 3 945 266 350 70 56 chr15 47276293 47276508 -56218466 + MLT1C LTR MaLR 241 458 -9 3 945 1094 95 0 13 chr15 47277880 47278029 -56216945 + B1_Mus1 SINE Alu 2 148 0 3 945 1669 217 113 46 chr15 47278039 47278536 -56216438 + RMER16 LTR ERVK 1 530 -3 3 945 1009 122 6 6 chr15 47278536 47278701 -56216273 + (GAA)n Simple_repeat Simple_repeat 1 165 0 3 945 1275 79 0 0 chr15 47278701 47278878 -56216096 + (GGA)n Simple_repeat Simple_repeat 2 178 0 3 945 1009 122 6 6 chr15 47278878 47278885 -56216089 + (GAA)n Simple_repeat Simple_repeat 1 7 0 3 945 348 326 69 37 chr15 47279001 47279189 -56215785 + LTR41 LTR ERVL 22 215 -553 3 945 505 365 39 0 chr15 47279732 47279940 -56215034 + ID_B1 SINE B4 9 224 0 3 945 200 184 41 0 chr15 47280437 47280486 -56214488 + A-rich Low_complexity Low_complexity 4 54 0 3 945 21 0 0 0 chr15 47280556 47280577 -56214397 + AT_rich Low_complexity Low_complexity 1 21 0 3 945 21 57 0 0 chr15 47280721 47280756 -56214218 + AT_rich Low_complexity Low_complexity 1 35 0 3 945 22 56 0 0 chr15 47280771 47280807 -56214167 + AT_rich Low_complexity Low_complexity 1 36 0 3 945 2060 92 10 0 chr15 47281154 47281506 -56213468 + L1_Mus3 LINE L1 6321 6638 0 3 945 306 304 65 56 chr15 47281519 47281627 -56213347 + RSINE1 SINE B4 28 136 -29 3 945 21 57 0 0 chr15 47281659 47281694 -56213280 + AT_rich Low_complexity Low_complexity 1 35 0 3 945 700 200 171 41 chr15 47282284 47282543 -56212431 + RMER16 LTR ERVK 1 473 -60 3 945 3405 45 0 7 chr15 47283088 47283514 -56211460 + L1Md_F3 LINE L1 6162 6584 0 3 945 1849 291 88 21 chr15 47283762 47284710 -56210264 + Lx6 LINE L1 6468 7460 0 3 945 687 206 8 0 chr15 47284966 47285097 -56209877 + RMER1A Other Other 344 475 -555 3 945 993 193 25 0 chr15 47285109 47285306 -56209668 - L1_Mur2 LINE L1 -159 5718 5517 3 945 441 0 0 0 chr15 47285526 47285575 -56209399 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 945 6426 133 36 2 chr15 47285582 47287288 -56207686 - L1_Mus3 LINE L1 -6 6632 4868 3 945 3114 128 13 152 chr15 47287286 47287584 -56207390 - MusHAL1 LINE L1 -1268 1444 1196 3 945 1110 75 0 45 chr15 47287584 47287738 -56207236 - B1_Mus2 SINE Alu 0 147 1 3 945 3114 128 13 152 chr15 47287738 47288211 -56206763 - MusHAL1 LINE L1 -1517 1195 780 3 945 31908 88 2 4 chr15 47288208 47289551 -56205423 - L1Md_F2 LINE L1 -1 6581 5244 3 945 243 0 0 0 chr15 47289551 47289578 -56205396 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 945 31908 93 7 3 chr15 47289578 47293526 -56201448 - L1Md_F2 LINE L1 -640 5243 1278 3 945 3304 188 62 68 chr15 47293527 47294316 -56200658 - L1VL1 LINE L1 -5624 798 15 3 945 194 125 39 77 chr15 47295775 47295827 -56199147 - L4 LINE RTE -1793 236 187 3 945 203 171 0 0 chr15 47296941 47296976 -56197998 + T-rich Low_complexity Low_complexity 3 37 0 3 945 276 328 99 23 chr15 47297105 47297236 -56197738 - RSINE1 SINE B4 -151 141 1 3 945 373 386 26 16 chr15 47297434 47297626 -56197348 - B3A SINE B2 -4 194 1 3 945 5405 39 0 0 chr15 47298044 47298689 -56196285 - L1Md_T LINE L1 0 6582 5938 3 945 180 77 0 0 chr15 47299176 47299202 -56195772 + (CAAAAA)n Simple_repeat Simple_repeat 4 29 0 3 945 198 0 0 0 chr15 47299339 47299361 -56195613 + (A)n Simple_repeat Simple_repeat 1 22 0 3 945 830 128 34 41 chr15 47299474 47299621 -56195353 + B1_Mus2 SINE Alu 2 147 0 3 945 1295 155 0 5 chr15 47300060 47300267 -56194707 - Lx LINE L1 -109 6545 6340 3 945 1682 79 16 8 chr15 47300265 47300508 -56194466 + Lx LINE L1 5726 5970 -684 3 945 380 192 8 16 chr15 47301221 47301308 -56193666 + L1_Mus4 LINE L1 5943 6026 -1032 3 945 259 333 143 0 chr15 47301712 47301838 -56193136 - ID_B1 SINE B4 0 224 81 3 945 490 335 30 15 chr15 47303099 47303302 -56191672 + MLT1A1 LTR MaLR 203 408 0 3 945 801 169 6 0 chr15 47303349 47303492 -56191482 + B1_Mus1 SINE Alu 1 150 0 3 945 524 326 80 21 chr15 47303983 47304356 -56190618 - L1M5 LINE L1 -1122 5024 4630 3 945 23 33 0 0 chr15 47304771 47304801 -56190173 + AT_rich Low_complexity Low_complexity 1 30 0 3 945 1060 305 67 33 chr15 47305199 47305620 -56189354 - Lx8 LINE L1 -348 7125 6691 3 945 518 333 15 7 chr15 47305620 47305756 -56189218 - RSINE1 SINE B4 -21 144 8 3 945 456 67 0 0 chr15 47305992 47306052 -56188922 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 945 786 22 0 0 chr15 47306173 47306265 -56188709 + (GAA)n Simple_repeat Simple_repeat 3 94 0 3 945 266 68 45 0 chr15 47306843 47306887 -56188087 + (CATA)n Simple_repeat Simple_repeat 1 46 0 3 945 234 239 0 0 chr15 47306895 47306941 -56188033 - Lx8 LINE L1 -743 6730 6685 3 945 416 341 8 16 chr15 47306948 47307073 -56187901 - RSINE1 SINE B4 -36 129 6 3 945 266 287 56 22 chr15 47307166 47307255 -56187719 + RMER15-int LTR ERVL 4903 4994 -5 3 945 225 65 0 0 chr15 47307473 47307504 -56187470 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 945 612 0 0 0 chr15 47307506 47307574 -56187400 + (TA)n Simple_repeat Simple_repeat 1 68 0 3 945 1665 11 11 0 chr15 47308042 47308232 -56186742 + B2_Mm1a SINE B2 2 193 0 3 945 1181 54 7 0 chr15 47308238 47308385 -56186589 + B1_Mus1 SINE Alu 1 148 0 3 945 361 157 0 40 chr15 47308399 47308525 -56186449 + A-rich Low_complexity Low_complexity 4 124 0 3 945 426 351 50 46 chr15 47308575 47308877 -56186097 + RMER15-int LTR ERVL 4210 4512 -487 3 945 376 290 12 142 chr15 47309466 47309719 -56185255 + Lx9 LINE L1 6974 7193 -451 3 945 3751 193 13 9 chr15 47309734 47310883 -56184091 - Lx2B LINE L1 -734 6266 5118 3 945 235 108 0 0 chr15 47310884 47310921 -56184053 + L1_Mur3 LINE L1 5092 5128 -752 3 945 27 0 0 0 chr15 47311298 47311325 -56183649 + AT_rich Low_complexity Low_complexity 1 27 0 3 945 324 70 0 0 chr15 47311492 47311535 -56183439 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 3 945 24 0 0 0 chr15 47311930 47311954 -56183020 + AT_rich Low_complexity Low_complexity 1 24 0 3 945 10546 66 1 0 chr15 47313847 47315219 -56179755 - L1Md_F2 LINE L1 -568 5315 3942 4 945 2201 83 0 3 chr15 47315196 47315486 -56179488 + L1Md_F2 LINE L1 5298 5586 -297 4 945 7827 58 4 2 chr15 47315486 47316480 -56178494 + L1Md_F2 LINE L1 5587 6582 0 4 945 2757 146 4 11 chr15 47316501 47316959 -56178015 + Lx2 LINE L1 6543 6997 0 4 946 249 139 0 0 chr15 47317715 47317758 -56177216 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 4 946 459 100 0 0 chr15 47318665 47318735 -56176239 - L1_Mur2 LINE L1 -1525 4361 4292 4 946 895 160 6 0 chr15 47318729 47318885 -56176089 - L1_Mur2 LINE L1 -2177 3700 3544 4 946 1181 181 74 103 chr15 47318891 47319230 -56175744 + ORR1A4 LTR MaLR 1 329 0 4 946 384 22 0 0 chr15 47319625 47319670 -56175304 + (TAA)n Simple_repeat Simple_repeat 2 46 0 4 946 435 236 44 84 chr15 47320003 47320206 -56174768 - Lx7 LINE L1 -50 7646 7452 4 946 565 251 2 36 chr15 47320270 47320409 -56174565 + B1_Mm SINE Alu 2 133 -16 4 946 1066 69 6 19 chr15 47320436 47320598 -56174376 + (GAAA)n Simple_repeat Simple_repeat 3 162 0 4 946 681 242 95 57 chr15 47320598 47320861 -56174113 - Lx7 LINE L1 -298 7398 7126 4 946 288 133 0 0 chr15 47320970 47321030 -56173944 + (T)n Simple_repeat Simple_repeat 1 60 0 4 946 737 230 77 0 chr15 47321032 47321228 -56173746 - Lx7 LINE L1 -662 7034 6824 4 946 258 176 0 0 chr15 47321228 47321279 -56173695 + GA-rich Low_complexity Low_complexity 3 53 0 4 946 637 246 81 78 chr15 47321284 47321606 -56173368 - MT2B LTR ERVL -57 544 185 4 946 3258 259 42 31 chr15 47321612 47322795 -56172179 - Lx7 LINE L1 -1725 5971 4777 4 946 5591 83 0 4 chr15 47322816 47323564 -56171410 - L1_Mus1 LINE L1 0 6567 5823 4 946 3394 18 5 12 chr15 47323570 47323969 -56171005 + MTA_Mm LTR MaLR 1 396 0 4 946 557 89 0 47 chr15 47323969 47324075 -56170899 + L1Md_F3 LINE L1 6484 6584 0 4 946 1580 42 16 0 chr15 47324092 47324284 -56170690 - L1Md_F3 LINE L1 -192 6392 6198 4 946 1333 41 6 0 chr15 47324284 47324455 -56170519 + L1Md_F3 LINE L1 6399 6570 -14 4 946 1954 103 16 5 chr15 47324455 47324910 -56170064 - L1VL4 LINE L1 -2391 1168 709 4 946 4285 200 86 4 chr15 47324910 47325825 -56169149 - Lx4B LINE L1 -82 6976 5987 4 946 1133 68 14 0 chr15 47325844 47325990 -56168984 - B1_Mus1 SINE Alu 0 148 1 4 946 2622 221 21 14 chr15 47326014 47326574 -56168400 - RLTR20D LTR ERVK -2 566 3 4 946 2549 186 71 1 chr15 47326575 47327150 -56167824 - Lx4B LINE L1 -1075 5983 5368 4 946 503 149 0 0 chr15 47327150 47327237 -56167737 + L1_Mur2 LINE L1 5155 5250 -636 4 946 231 36 0 0 chr15 47327267 47327295 -56167679 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 4 946 1657 126 4 27 chr15 47327316 47327577 -56167397 + Lx LINE L1 6362 6616 -38 4 946 17872 176 39 59 chr15 47327573 47330191 -56164783 - Lx5 LINE L1 -1102 5948 3404 4 946 1044 88 7 33 chr15 47330191 47330343 -56164631 - B1_Mus1 SINE Alu 0 148 1 4 946 17872 181 41 68 chr15 47330343 47332344 -56162630 - Lx5 LINE L1 -2474 3403 1444 4 946 1012 207 52 0 chr15 47332931 47333144 -56161830 + URR1B DNA MER1_type 2 225 0 4 946 1437 211 158 33 chr15 47333275 47333642 -56161332 + MTC LTR MaLR 1 413 -8 4 946 200 135 0 73 chr15 47333846 47333942 -56161032 + T-rich Low_complexity Low_complexity 2 90 0 4 946 700 102 254 0 chr15 47333945 47334063 -56160911 - B1_Mus1 SINE Alu 0 148 1 4 946 360 0 0 0 chr15 47334255 47334295 -56160679 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 946 377 391 78 0 chr15 47334376 47334555 -56160419 - ORR1D2 LTR MaLR -177 193 1 4 946 456 275 124 21 chr15 47334690 47334876 -56160098 + B3 SINE B2 2 206 -10 4 946 3921 106 43 2 chr15 47335679 47336283 -56158691 - L1_Mus3 LINE L1 -10 6628 6000 4 946 26548 129 30 28 chr15 47336378 47338102 -56156872 - L1_Mus2 LINE L1 0 6566 4849 4 946 4527 82 2 2 chr15 47338102 47338689 -56156285 + LTRIS_Mus LTR ERV1 1 587 0 4 946 26548 128 20 10 chr15 47338689 47339423 -56155551 - L1_Mus2 LINE L1 -1035 4848 4085 4 946 1214 55 0 0 chr15 47339423 47339569 -56155405 + B1_Mm SINE Alu 2 147 0 4 946 26548 128 20 10 chr15 47339569 47340645 -56154329 - L1_Mus2 LINE L1 -1799 4084 3005 4 946 194 0 39 0 chr15 47340645 47340671 -56154303 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 946 26548 128 20 10 chr15 47340671 47342458 -56152516 - L1_Mus2 LINE L1 -2879 3004 1208 4 946 4148 77 9 16 chr15 47342458 47343026 -56151948 + LTRIS2 LTR ERV1 1 564 0 4 946 2671 163 9 13 chr15 47343026 47343529 -56151445 - L1_Mus2 LINE L1 -5406 1210 705 4 946 553 317 91 14 chr15 47343661 47343946 -56151028 - L1VL2 LINE L1 -5933 402 96 4 946 1063 95 0 39 chr15 47344008 47344150 -56150824 + B1_Mus1 SINE Alu 1 139 -9 4 946 207 0 0 0 chr15 47344150 47344173 -56150801 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 4 946 1063 95 0 39 chr15 47344173 47344184 -56150790 + B1_Mus1 SINE Alu 140 148 0 4 946 22 35 0 0 chr15 47344412 47344441 -56150533 + AT_rich Low_complexity Low_complexity 1 29 0 4 946 337 256 149 31 chr15 47345137 47345298 -56149676 - L1M2 LINE L1 -2878 3265 3086 4 946 230 222 7 106 chr15 47345304 47345445 -56149529 - Lx4B LINE L1 0 7058 6932 4 946 410 262 31 31 chr15 47345448 47345578 -56149396 + Lx4B LINE L1 6116 6245 -813 4 946 9199 199 27 14 chr15 47345578 47347858 -56147116 - L1_Mur2 LINE L1 -1937 3940 1632 4 946 304 261 62 0 chr15 47347909 47348026 -56146948 - L1M2 LINE L1 -514 5777 5652 4 946 1746 94 14 4 chr15 47348269 47348547 -56146427 - MusHAL1 LINE L1 -786 1926 1646 4 946 208 180 0 20 chr15 47349107 47349158 -56145816 + T-rich Low_complexity Low_complexity 1 50 0 4 946 211 140 0 23 chr15 47349244 47349288 -56145686 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 4 946 23 0 0 0 chr15 47349348 47349371 -56145603 + AT_rich Low_complexity Low_complexity 1 23 0 4 946 185 0 0 39 chr15 47349593 47349619 -56145355 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 4 946 641 340 88 28 chr15 47350996 47351359 -56143615 + Kanga1c DNA Tc2 343 727 -2 4 946 389 95 16 0 chr15 47351728 47351791 -56143183 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 946 224 244 88 11 chr15 47352849 47352940 -56142034 + C-rich Low_complexity Low_complexity 3 100 0 4 946 1640 170 47 35 chr15 47353051 47353494 -56141480 + RMER17C LTR ERVK 25 439 -519 4 946 2914 99 33 77 chr15 47354713 47355261 -56139713 - Lx3A LINE L1 -681 6300 5777 4 946 253 128 0 0 chr15 47355257 47355296 -56139678 - L1_Mur1 LINE L1 -6941 41 3 4 946 3554 186 46 10 chr15 47355907 47356627 -56138347 - RMER6A LTR ERVK -10 746 1 4 946 318 245 54 54 chr15 47356627 47356706 -56138268 - MTD LTR MaLR -104 315 237 4 946 434 271 55 144 chr15 47356715 47357164 -56137810 - RMER2 LTR ERV1 -16 551 5 4 946 821 309 15 9 chr15 47357315 47357639 -56137335 - RLTR6-int LTR ERV1 -123 7655 7330 4 946 454 355 31 43 chr15 47357984 47358472 -56136502 - MMERGLN-int LTR ERV1 -3827 3729 3248 4 946 231 297 90 90 chr15 47358539 47358761 -56136213 - MLT2B5 LTR ERVL -139 462 241 4 946 351 331 43 20 chr15 47358762 47359116 -56135858 - MMERGLN-int LTR ERV1 -4646 2910 2545 4 946 273 286 89 50 chr15 47359449 47359651 -56135323 - MMERGLN-int LTR ERV1 -5434 2167 1958 4 946 428 355 99 43 chr15 47359778 47360434 -56134540 - MMERGLN-int LTR ERV1 -3330 1733 1041 4 946 367 258 78 180 chr15 47361596 47361918 -56133056 - RMER2 LTR ERV1 -29 538 250 4 946 1333 199 8 78 chr15 47361923 47362283 -56132691 - L1VL4 LINE L1 -5851 451 117 4 946 1368 143 5 0 chr15 47362306 47362523 -56132451 - RMER6C LTR ERVK 0 690 473 4 946 28 0 0 0 chr15 47362778 47362806 -56132168 + AT_rich Low_complexity Low_complexity 1 28 0 4 946 495 237 0 0 chr15 47362829 47362922 -56132052 + RLTR23 LTR ERV1 6 98 -332 4 946 843 252 40 122 chr15 47362960 47363313 -56131661 + RLTR23 LTR ERV1 107 430 0 4 946 246 125 0 0 chr15 47363795 47363843 -56131131 + (GTTTG)n Simple_repeat Simple_repeat 2 49 0 4 946 829 242 189 3 chr15 47363901 47364266 -56130708 - Lx9 LINE L1 0 7644 7212 4 946 741 273 19 0 chr15 47365170 47365379 -56129595 + B3 SINE B2 3 215 -1 4 946 873 11 0 121 chr15 47365410 47365609 -56129365 + (GGGAA)n Simple_repeat Simple_repeat 4 178 0 4 946 335 303 142 15 chr15 47365609 47365743 -56129231 + HAL1-3A_ME LINE L1 2285 2435 -423 4 946 740 138 29 22 chr15 47365743 47366018 -56128956 + GA-rich Low_complexity Low_complexity 1 277 0 4 946 952 17 0 109 chr15 47366024 47366226 -56128748 + (GAAAA)n Simple_repeat Simple_repeat 1 180 0 4 946 653 222 131 56 chr15 47366728 47367033 -56127941 + RLTR15 LTR ERVK 14 341 -18 4 946 43 56 0 0 chr15 47367082 47367153 -56127821 + AT_rich Low_complexity Low_complexity 1 71 0 4 946 734 350 22 6 chr15 47367242 47367555 -56127419 - MTE-int LTR MaLR -1262 318 1 4 946 536 241 0 17 chr15 47367573 47367691 -56127283 - B1_Mur2 SINE Alu -1 148 33 4 946 225 0 0 0 chr15 47367881 47367906 -56127068 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 4 946 26 64 0 0 chr15 47368879 47368926 -56126048 + AT_rich Low_complexity Low_complexity 1 47 0 4 946 1992 146 3 3 chr15 47369086 47369398 -56125576 - RLTR10E LTR ERVK -2 388 1 4 946 4063 105 10 1 chr15 47369398 47370080 -56124894 - IAPEY3-int LTR ERVK 0 7680 6965 4 946 1294 124 107 0 chr15 47370080 47370305 -56124669 - IAP-d-int LTR ERVK -1287 5255 5007 4 946 302 161 18 0 chr15 47370305 47370361 -56124613 - IAP-d-int LTR ERVK -6039 503 447 4 946 1839 196 121 81 chr15 47370456 47370929 -56124045 - RLTR10-int LTR ERVK -1064 923 401 4 946 1323 28 11 22 chr15 47370929 47371110 -56123864 + (TTCCC)n Simple_repeat Simple_repeat 2 180 0 4 946 1839 196 121 81 chr15 47371110 47371524 -56123450 - RLTR10-int LTR ERVK -1587 400 1 4 946 1218 26 0 0 chr15 47371535 47371686 -56123288 + LSU-rRNA_Hsa rRNA rRNA 1495 1645 -3390 4 946 1960 148 3 3 chr15 47371780 47372085 -56122889 + RLTR10E LTR ERVK 1 305 -6 4 946 29514 82 14 2 chr15 47372097 47376540 -56118434 + L1Md_F2 LINE L1 1089 5585 -298 4 946 7255 81 8 10 chr15 47376541 47377538 -56117436 + L1Md_F2 LINE L1 5587 6581 -1 4 946 29 47 0 0 chr15 47378418 47378461 -56116513 + AT_rich Low_complexity Low_complexity 1 43 0 4 946 8055 102 29 18 chr15 47378461 47379406 -56115568 - Lx3_Mus LINE L1 0 7009 6051 4 946 180 0 0 0 chr15 47379406 47379426 -56115548 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 4 946 8055 102 29 18 chr15 47379426 47379704 -56115270 - Lx3_Mus LINE L1 -959 6050 5773 4 946 1829 181 29 17 chr15 47379704 47380053 -56114921 - RLTR13C2 LTR ERVK -1 807 455 4 946 34816 59 1 24 chr15 47380053 47385865 -56109109 + L1Md_T LINE L1 99 5586 -297 4 946 7987 58 0 0 chr15 47385865 47386886 -56108088 + L1Md_T LINE L1 5587 6582 0 4 946 3363 104 41 10 chr15 47386886 47387393 -56107581 - RLTR13C2 LTR ERVK -285 523 1 4 946 25564 95 10 5 chr15 47387393 47391141 -56103833 - L1_Mur1 LINE L1 -105 5781 2013 4 946 389 273 20 129 chr15 47391209 47391411 -56103563 + B2_Mm2 SINE B2 6 185 -10 4 946 8526 181 26 5 chr15 47392097 47393759 -56101215 + L1_Mm LINE L1 4017 5713 -170 4 946 33915 76 54 7 chr15 47393781 47399005 -56095969 + Lx LINE L1 271 5589 -297 4 946 8044 38 8 2 chr15 47399005 47399997 -56094977 + L1Md_F3 LINE L1 5587 6584 0 4 946 33915 94 32 2 chr15 47399997 47400332 -56094642 + Lx LINE L1 5590 6047 -610 4 946 6628 111 23 7 chr15 47400317 47401261 -56093713 + MusHAL1 LINE L1 1360 2326 -386 5 946 617 0 14 0 chr15 47401261 47401334 -56093640 + (TA)n Simple_repeat Simple_repeat 2 75 0 5 946 924 132 7 14 chr15 47401334 47401480 -56093494 - B1_Mus1 SINE Alu -3 145 1 5 946 6628 111 23 7 chr15 47401480 47401588 -56093386 + MusHAL1 LINE L1 2327 2429 -283 5 946 3120 121 115 8 chr15 47401593 47402125 -56092849 + RLTR1D LTR ERV1 1 589 -16 5 946 3003 136 4 0 chr15 47402141 47402640 -56092334 + L1_Mus3 LINE L1 3629 4129 -1754 5 946 1816 201 24 50 chr15 47402641 47403059 -56091915 - RLTR9B2 LTR ERVK -13 407 1 5 946 10716 125 6 8 chr15 47403059 47405574 -56089400 + L1_Mus3 LINE L1 4130 6636 -2 5 946 743 64 9 0 chr15 47406303 47406413 -56088561 + (CAGAGA)n Simple_repeat Simple_repeat 2 112 0 5 946 221 0 0 33 chr15 47406935 47406965 -56088009 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 946 744 329 74 19 chr15 47409381 47409443 -56085531 + Lx8 LINE L1 6886 6949 -524 5 946 618 51 0 0 chr15 47409443 47409521 -56085453 + (CCTAT)n Simple_repeat Simple_repeat 3 80 0 5 946 744 329 74 19 chr15 47409521 47409836 -56085138 + Lx8 LINE L1 6950 7283 -190 5 946 638 253 114 31 chr15 47409967 47410195 -56084779 - Lx6 LINE L1 -17 7443 7197 5 946 475 119 0 0 chr15 47410321 47410388 -56084586 + B1_Mm SINE Alu 72 138 -9 5 946 315 0 0 0 chr15 47410388 47410423 -56084551 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 946 747 125 0 0 chr15 47411440 47411576 -56083398 + (TG)n Simple_repeat Simple_repeat 1 136 0 5 946 346 293 12 0 chr15 47411613 47411695 -56083279 - RSINE1 SINE B4 -63 102 20 5 946 23 0 0 0 chr15 47411732 47411755 -56083219 + AT_rich Low_complexity Low_complexity 1 23 0 5 946 22 0 0 0 chr15 47413249 47413271 -56081703 + AT_rich Low_complexity Low_complexity 1 22 0 5 946 711 202 30 12 chr15 47414578 47414743 -56080231 + Lx3B LINE L1 6803 6970 -3 5 946 910 80 15 0 chr15 47414763 47414900 -56080074 + (GAAAA)n Simple_repeat Simple_repeat 2 140 0 5 946 481 291 154 41 chr15 47415074 47415418 -56079556 + Lx9 LINE L1 7059 7441 -203 5 946 642 221 33 20 chr15 47415508 47415660 -56079314 - URR1B DNA MER1_type 0 225 72 5 946 5239 80 33 1 chr15 47415620 47416348 -56078626 + RLTR13D5 LTR ERVK 273 1023 0 5 946 405 39 0 0 chr15 47416348 47416399 -56078575 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 946 369 0 0 0 chr15 47416399 47416439 -56078535 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 946 21 57 0 0 chr15 47416526 47416561 -56078413 + AT_rich Low_complexity Low_complexity 1 35 0 5 946 22 56 0 0 chr15 47417650 47417686 -56077288 + AT_rich Low_complexity Low_complexity 1 36 0 5 946 23 33 0 0 chr15 47418453 47418483 -56076491 + AT_rich Low_complexity Low_complexity 1 30 0 5 946 688 309 43 14 chr15 47418857 47419067 -56075907 + B3 SINE B2 1 216 0 5 946 307 274 54 39 chr15 47419231 47419360 -56075614 + L1MB8 LINE L1 5865 5995 -183 5 946 996 131 99 5 chr15 47420049 47420220 -56074754 + Lx LINE L1 6444 6621 -33 5 946 216 0 0 0 chr15 47420220 47420244 -56074730 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 5 946 996 131 99 5 chr15 47420244 47420264 -56074710 + Lx LINE L1 6622 6651 -3 5 946 26 0 0 0 chr15 47420348 47420374 -56074600 + AT_rich Low_complexity Low_complexity 1 26 0 5 946 3597 150 35 13 chr15 47420844 47421477 -56073497 + Lx3A LINE L1 6328 6974 -7 5 946 320 74 0 169 chr15 47421505 47421570 -56073404 - RLTR33 LTR ERVK -172 506 453 5 946 21 0 0 0 chr15 47421608 47421629 -56073345 + AT_rich Low_complexity Low_complexity 1 21 0 5 946 804 48 0 0 chr15 47421731 47421836 -56073138 + (CA)n Simple_repeat Simple_repeat 2 106 0 5 946 565 127 8 63 chr15 47422723 47422849 -56072125 - Lx LINE L1 0 6654 6536 5 946 17266 159 25 17 chr15 47422854 47427081 -56067893 - L1VL2 LINE L1 -1255 4628 365 5 946 711 241 91 23 chr15 47430397 47430660 -56064314 - Lx9 LINE L1 -7 7637 7357 5 946 1199 178 16 40 chr15 47430671 47430922 -56064052 + L1_Rod LINE L1 5431 5675 -172 5 946 1004 156 24 19 chr15 47431201 47431410 -56063564 + RMER17A-int LTR ERVK 782 991 -737 5 946 604 179 8 24 chr15 47431446 47431572 -56063402 + RMER17A-int LTR ERVK 982 1105 -623 5 946 2876 139 79 46 chr15 47431614 47432156 -56062818 + RMER17A-int LTR ERVK 1084 1643 -85 5 946 1821 109 12 0 chr15 47432147 47432395 -56062579 + MERVK26-int LTR ERVK 6669 6919 0 5 946 4752 141 48 36 chr15 47432396 47433350 -56061624 + RMER17B LTR ERVK 1 956 -2 5 946 374 333 138 31 chr15 47433611 47434088 -56060886 - L1MC LINE L1 -2130 4016 3489 5 946 26 64 0 0 chr15 47434117 47434164 -56060810 + AT_rich Low_complexity Low_complexity 1 47 0 5 946 301 309 76 50 chr15 47434258 47434456 -56060518 - L1M5 LINE L1 -2979 3167 2965 5 946 33 80 0 0 chr15 47434899 47434974 -56060000 + AT_rich Low_complexity Low_complexity 1 75 0 5 946 800 114 0 15 chr15 47436424 47436558 -56058416 + L1Md_F2 LINE L1 6440 6571 -11 5 946 341 348 77 35 chr15 47437166 47437425 -56057549 + MLT1C LTR MaLR 198 467 0 5 946 216 241 42 67 chr15 47438891 47439023 -56055951 + PB1D10 SINE Alu 5 124 -3 5 946 242 29 0 28 chr15 47440299 47440335 -56054639 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 5 946 254 280 25 74 chr15 47440335 47440409 -56054565 - ID4 SINE ID -8 75 5 5 946 232 194 16 0 chr15 47440450 47440512 -56054462 + (TA)n Simple_repeat Simple_repeat 1 63 0 5 946 25 0 0 0 chr15 47440952 47440977 -56053997 + AT_rich Low_complexity Low_complexity 1 25 0 5 946 676 277 26 0 chr15 47441241 47441396 -56053578 + RSINE1 SINE B4 1 159 -6 5 946 254 402 19 0 chr15 47442598 47442705 -56052269 + PB1D10 SINE Alu 7 115 -2 5 946 252 309 0 20 chr15 47442707 47442806 -56052168 + A-rich Low_complexity Low_complexity 5 101 0 5 946 304 309 26 13 chr15 47442832 47442983 -56051991 - L1_Mur3 LINE L1 -426 5454 5302 5 946 360 256 66 8 chr15 47442988 47443110 -56051864 + L1MA4 LINE L1 5802 5930 -370 5 946 25 51 0 0 chr15 47443276 47443315 -56051659 + AT_rich Low_complexity Low_complexity 1 39 0 5 946 283 0 47 23 chr15 47443858 47443901 -56051073 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 5 946 722 61 261 0 chr15 47443901 47444016 -56050958 - B1_Mus1 SINE Alu -2 146 2 5 946 1010 303 36 27 chr15 47444035 47444367 -56050607 + ORR1D2 LTR MaLR 36 370 0 5 946 731 145 14 0 chr15 47444382 47444520 -56050454 + GA-rich Low_complexity Low_complexity 3 142 0 5 946 364 290 64 23 chr15 47444675 47444848 -56050126 + B3A SINE B2 1 180 -18 5 946 37 23 0 0 chr15 47445311 47445355 -56049619 + AT_rich Low_complexity Low_complexity 1 44 0 5 946 22 80 0 0 chr15 47445926 47445976 -56048998 + AT_rich Low_complexity Low_complexity 1 50 0 5 946 276 260 19 39 chr15 47446196 47446300 -56048674 + (CATA)n Simple_repeat Simple_repeat 3 104 0 5 946 32 43 0 0 chr15 47446349 47446395 -56048579 + AT_rich Low_complexity Low_complexity 1 46 0 5 946 21 82 0 0 chr15 47446533 47446582 -56048392 + AT_rich Low_complexity Low_complexity 1 49 0 5 946 2244 42 0 17 chr15 47446678 47446967 -56048007 - L1Md_F2 LINE L1 0 6582 6299 5 946 237 226 16 16 chr15 47447326 47447389 -56047585 + (TA)n Simple_repeat Simple_repeat 1 63 0 5 946 615 310 101 28 chr15 47447500 47447867 -56047107 - MT2A LTR ERVL -50 551 74 5 946 273 338 0 0 chr15 47447855 47447932 -56047042 - MT2A LTR ERVL -404 129 53 5 118 286 307 0 0 chr15 47447977 47448065 -56046909 - Lx9 LINE L1 -176 7468 7381 5 947 7378 206 51 28 chr15 47448190 47449860 -56045114 - MERVL_2A-int LTR ERVL -4052 1709 1 5 947 453 269 120 29 chr15 47450493 47450677 -56044297 - MT2A LTR ERVL -133 468 158 5 947 21 0 0 0 chr15 47451975 47451996 -56042978 + AT_rich Low_complexity Low_complexity 1 21 0 5 947 31 26 0 0 chr15 47453236 47453274 -56041700 + AT_rich Low_complexity Low_complexity 1 38 0 5 947 1527 116 72 4 chr15 47453370 47453621 -56041353 + Lx2 LINE L1 6719 6986 -11 5 947 2947 205 46 8 chr15 47453650 47454341 -56040633 + Lx2B LINE L1 6222 7041 -17 5 947 1140 261 45 24 chr15 47454447 47454784 -56040190 - Lx6 LINE L1 -8 7452 7109 5 947 21 57 0 0 chr15 47455781 47455816 -56039158 + AT_rich Low_complexity Low_complexity 1 35 0 5 947 293 426 20 5 chr15 47457196 47457399 -56037575 - MER20 DNA MER1_type -7 212 7 5 947 983 119 6 17 chr15 47457532 47457711 -56037263 + (GGA)n Simple_repeat Simple_repeat 3 179 0 5 947 774 59 0 0 chr15 47457711 47457807 -56037167 + (GAA)n Simple_repeat Simple_repeat 3 98 0 5 947 453 19 0 0 chr15 47458042 47458096 -56036878 + (GGGA)n Simple_repeat Simple_repeat 3 56 0 5 947 189 178 0 0 chr15 47458101 47458146 -56036828 + GA-rich Low_complexity Low_complexity 2 46 0 5 947 441 233 145 13 chr15 47458304 47458456 -56036518 + Lx2B LINE L1 6822 6993 -7 5 947 3884 117 15 13 chr15 47458724 47459330 -56035644 - Lx LINE L1 0 6654 6048 5 947 942 216 27 54 chr15 47459582 47459876 -56035098 - Lx7 LINE L1 -46 7650 7365 5 947 422 162 0 18 chr15 47459876 47459989 -56034985 + (CAGAGA)n Simple_repeat Simple_repeat 4 114 0 5 947 347 250 21 11 chr15 47459999 47460092 -56034882 - Lx7 LINE L1 -343 7353 7260 5 947 266 0 0 29 chr15 47460376 47460411 -56034563 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 947 233 159 0 22 chr15 47460411 47460449 -56034525 - B1_Mur4 SINE Alu -9 141 104 5 947 23 68 0 0 chr15 47461316 47461360 -56033614 + AT_rich Low_complexity Low_complexity 1 44 0 5 947 1151 240 32 31 chr15 47461527 47461888 -56033086 + Lx9 LINE L1 5536 5931 -1713 5 947 261 0 0 0 chr15 47462085 47462114 -56032860 + (TAGA)n Simple_repeat Simple_repeat 1 29 0 5 947 1249 322 81 77 chr15 47462139 47462916 -56032058 + Lx9 LINE L1 6381 7160 -484 5 947 1617 314 70 51 chr15 47462998 47463863 -56031111 + Lx9 LINE L1 6729 7610 -34 5 947 21 0 0 0 chr15 47464157 47464178 -56030796 + AT_rich Low_complexity Low_complexity 1 21 0 5 947 320 180 33 0 chr15 47464704 47464765 -56030209 - MTEb LTR MaLR -20 359 297 5 947 183 42 0 0 chr15 47465098 47465122 -56029852 + (TTA)n Simple_repeat Simple_repeat 1 24 0 5 947 1097 82 7 0 chr15 47465617 47465764 -56029210 + B1_Mus1 SINE Alu 1 148 0 5 947 23 0 0 0 chr15 47465893 47465916 -56029058 + AT_rich Low_complexity Low_complexity 1 23 0 6 947 246 81 0 0 chr15 47466295 47466332 -56028642 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 947 230 0 33 0 chr15 47466335 47466365 -56028609 + (GA)n Simple_repeat Simple_repeat 2 32 0 6 947 436 146 9 28 chr15 47467171 47467277 -56027697 + L1_Mus4 LINE L1 6533 6636 0 6 947 1120 219 5 5 chr15 47467469 47467689 -56027285 + URR1A DNA MER1_type 7 226 0 6 947 23 33 0 0 chr15 47468052 47468082 -56026892 + AT_rich Low_complexity Low_complexity 1 30 0 6 947 410 246 32 24 chr15 47468226 47468351 -56026623 - RMER30 DNA MER1_type -64 138 13 6 947 21 0 0 0 chr15 47469074 47469095 -56025879 + AT_rich Low_complexity Low_complexity 1 21 0 6 947 180 0 0 0 chr15 47469119 47469139 -56025835 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 6 947 8267 48 0 1 chr15 47469147 47470519 -56024455 - L1Md_F2 LINE L1 0 6582 5211 6 947 21621 100 37 46 chr15 47470520 47472017 -56022957 + Lx3_Mus LINE L1 2316 3842 -2044 6 947 216 0 0 0 chr15 47472017 47472041 -56022933 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 947 21621 99 32 37 chr15 47472041 47474317 -56020657 + Lx3_Mus LINE L1 3843 6058 -951 6 947 1394 145 101 5 chr15 47474307 47474721 -56020253 + Lx3_Mus LINE L1 6555 7008 -1 6 947 811 281 198 25 chr15 47475063 47475457 -56019517 + RMER15 LTR ERVL 99 560 -15 6 947 263 323 94 11 chr15 47476452 47476643 -56018331 + Lx9 LINE L1 7264 7470 -174 6 947 2005 207 13 37 chr15 47477313 47477803 -56017171 + Lx2B LINE L1 6466 6974 -2 6 947 402 57 0 0 chr15 47477880 47477933 -56017041 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 947 304 268 28 14 chr15 47477960 47478032 -56016942 - B4A SINE B4 0 292 220 6 947 288 333 60 36 chr15 47478045 47478213 -56016761 - B4 SINE B4 -118 174 3 6 947 22 0 0 0 chr15 47478669 47478691 -56016283 + AT_rich Low_complexity Low_complexity 1 22 0 6 947 25 31 0 0 chr15 47479338 47479370 -56015604 + AT_rich Low_complexity Low_complexity 1 32 0 6 947 631 154 0 0 chr15 47479597 47479720 -56015254 - Lx2A1 LINE L1 0 7008 6886 6 947 499 323 53 38 chr15 47480305 47480341 -56014633 - B3 SINE B2 -4 212 180 6 947 417 39 0 0 chr15 47480341 47480392 -56014582 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 947 499 323 53 38 chr15 47480392 47480564 -56014410 - B3 SINE B2 -37 179 2 6 947 186 133 0 0 chr15 47480564 47480594 -56014380 + (T)n Simple_repeat Simple_repeat 1 30 0 6 947 1162 68 0 0 chr15 47480596 47480743 -56014231 - B1_Mm SINE Alu 0 147 1 6 947 28 86 0 0 chr15 47481894 47481964 -56013010 + AT_rich Low_complexity Low_complexity 1 70 0 6 947 2691 77 23 10 chr15 47482284 47482679 -56012295 + L1Md_F2 LINE L1 6183 6582 0 6 947 1191 268 29 36 chr15 47482798 47483213 -56011761 + Lx9 LINE L1 6840 7251 -393 6 947 2412 154 0 47 chr15 47483210 47483659 -56011315 + Lx LINE L1 4359 4786 -1097 6 947 6855 137 20 86 chr15 47483929 47485985 -56008989 + Lx LINE L1 4772 6654 0 6 947 2597 136 15 33 chr15 47486446 47486902 -56008072 + L1_Mur2 LINE L1 5424 5871 -6 6 947 2882 208 31 13 chr15 47486900 47487514 -56007460 + Lx2B LINE L1 6372 6996 -4 6 947 24 67 0 0 chr15 47488675 47488720 -56006254 + AT_rich Low_complexity Low_complexity 1 45 0 6 947 26 30 0 0 chr15 47490145 47490178 -56004796 + AT_rich Low_complexity Low_complexity 1 33 0 6 947 27 29 0 0 chr15 47491191 47491225 -56003749 + AT_rich Low_complexity Low_complexity 1 34 0 6 947 3393 240 64 71 chr15 47492749 47493919 -56001055 + Lx7 LINE L1 6535 7696 0 6 947 366 61 0 0 chr15 47494652 47494701 -56000273 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 947 610 233 72 18 chr15 47494857 47495017 -55999957 + ORR1D1 LTR MaLR 1 170 -204 6 947 180 0 0 0 chr15 47495017 47495037 -55999937 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 6 947 466 327 7 7 chr15 47495064 47495218 -55999756 + MT2B LTR ERVL 387 540 -61 6 947 29 47 0 0 chr15 47495274 47495317 -55999657 + AT_rich Low_complexity Low_complexity 1 43 0 6 947 437 174 0 21 chr15 47495328 47495422 -55999552 + (TATATG)n Simple_repeat Simple_repeat 4 95 0 6 947 722 141 8 0 chr15 47496313 47496441 -55998533 + (CA)n Simple_repeat Simple_repeat 2 130 0 6 947 189 175 0 0 chr15 47496507 47496547 -55998427 + (TA)n Simple_repeat Simple_repeat 1 40 0 6 947 258 277 0 15 chr15 47496842 47496908 -55998066 + (CATA)n Simple_repeat Simple_repeat 3 67 0 6 947 637 181 35 0 chr15 47496997 47497113 -55997861 + B1_Mur3 SINE Alu 10 129 -20 6 947 493 220 162 81 chr15 47497704 47497951 -55997023 - Lx2B LINE L1 -12 6988 6722 6 947 21 0 0 0 chr15 47499199 47499220 -55995754 + AT_rich Low_complexity Low_complexity 1 21 0 6 947 23 33 0 0 chr15 47500161 47500191 -55994783 + AT_rich Low_complexity Low_complexity 1 30 0 1 947 226 330 158 22 chr15 47500386 47500569 -55994405 - B3 SINE B2 0 216 9 2 947 26 50 0 0 chr15 47500804 47500844 -55994130 + AT_rich Low_complexity Low_complexity 1 40 0 3 947 7204 114 13 6 chr15 47502367 47503829 -55991145 - L1_Mus3 LINE L1 -2 6636 5167 4 947 2331 145 35 10 chr15 47503823 47504227 -55990747 - Lx LINE L1 -24 6630 6217 5 947 843 184 201 0 chr15 47504264 47504443 -55990531 + B3 SINE B2 2 216 0 6 947 3007 130 15 2 chr15 47504463 47504933 -55990041 - L1_Mm LINE L1 -366 5517 5042 7 947 539 58 0 0 chr15 47504931 47505000 -55989974 + L1_Mus3 LINE L1 6219 6287 -351 8 947 1738 104 64 0 chr15 47505003 47505253 -55989721 - L1_Mus4 LINE L1 -357 6279 6014 9 947 318 374 45 8 chr15 47506036 47506168 -55988806 - B1F SINE Alu 0 149 13 1 947 216 135 0 0 chr15 47506717 47506754 -55988220 + (CTTG)n Simple_repeat Simple_repeat 3 39 0 1 947 186 43 0 0 chr15 47508281 47508304 -55986670 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 947 256 310 70 65 chr15 47508435 47508621 -55986353 - MIR SINE MIR -46 216 30 1 947 243 0 0 0 chr15 47509330 47509357 -55985617 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 947 180 245 0 0 chr15 47509360 47509413 -55985561 + (TATG)n Simple_repeat Simple_repeat 4 56 0 1 947 432 0 0 0 chr15 47509413 47509461 -55985513 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 947 183 129 0 0 chr15 47509627 47509658 -55985316 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 947 271 386 8 16 chr15 47511860 47511989 -55982985 + B4A SINE B4 158 285 -7 1 947 624 27 0 0 chr15 47511998 47512072 -55982902 + (TC)n Simple_repeat Simple_repeat 1 74 0 1 947 249 83 0 0 chr15 47512072 47512107 -55982867 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 947 1017 91 0 0 chr15 47513410 47513553 -55981421 + B1_Mus1 SINE Alu 1 143 -5 2 947 315 0 0 0 chr15 47513556 47513591 -55981383 + (TAA)n Simple_repeat Simple_repeat 3 37 0 2 947 419 338 104 28 chr15 47513990 47514316 -55980658 + Lx8 LINE L1 7121 7471 -2 2 947 2622 256 51 5 chr15 47515035 47515702 -55979272 + Lx7 LINE L1 6313 7010 -686 2 947 1718 283 50 17 chr15 47515827 47516445 -55978529 + Lx6 LINE L1 6429 7434 -26 2 947 1082 62 7 40 chr15 47516567 47516719 -55978255 + B1_Mus1 SINE Alu 1 147 -1 2 947 543 285 6 6 chr15 47516731 47516890 -55978084 + Lx9 LINE L1 7281 7439 -205 2 947 369 0 0 0 chr15 47516891 47516932 -55978042 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 947 369 0 0 0 chr15 47517215 47517256 -55977718 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 947 277 250 12 0 chr15 47518814 47518898 -55976076 + (TA)n Simple_repeat Simple_repeat 2 86 0 3 947 562 360 80 34 chr15 47518899 47519399 -55975575 + MER90 LTR ERV1 48 570 -5 3 947 260 122 0 39 chr15 47519559 47519610 -55975364 + (CATA)n Simple_repeat Simple_repeat 3 51 0 3 947 330 26 0 0 chr15 47519706 47519745 -55975229 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 947 2744 278 84 21 chr15 47520004 47520912 -55974062 + Lx7 LINE L1 6397 7361 -335 3 947 402 21 0 0 chr15 47520918 47520965 -55974009 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 947 621 72 0 0 chr15 47521044 47521127 -55973847 + (TA)n Simple_repeat Simple_repeat 1 83 0 3 947 612 243 15 87 chr15 47521409 47521675 -55973299 + Lx7 LINE L1 7447 7693 -3 3 947 244 287 45 94 chr15 47521779 47522002 -55972972 - Tigger7 DNA MER2_type -3 2488 2277 3 947 268 351 35 0 chr15 47522145 47522259 -55972715 - Tigger7 DNA MER2_type -2373 118 1 3 947 776 193 21 0 chr15 47522656 47522796 -55972178 + B1_Mur3 SINE Alu 1 143 -6 3 947 281 172 16 0 chr15 47522797 47522861 -55972113 + (TAAA)n Simple_repeat Simple_repeat 3 67 0 3 947 28 29 0 0 chr15 47522954 47522989 -55971985 + AT_rich Low_complexity Low_complexity 1 35 0 4 947 21 71 0 0 chr15 47523641 47523683 -55971291 + AT_rich Low_complexity Low_complexity 1 42 0 4 947 1523 23 0 0 chr15 47523696 47523870 -55971104 - B2_Mm1a SINE B2 -19 174 1 4 947 734 319 42 5 chr15 47523874 47524063 -55970911 - B3 SINE B2 -12 204 9 4 947 3902 238 18 30 chr15 47524709 47525089 -55969885 + Lx5 LINE L1 6085 6453 -597 4 947 5717 76 6 65 chr15 47525089 47525942 -55969032 + RLTR13B4 LTR ERVK 1 803 0 4 947 3902 238 18 30 chr15 47525942 47526538 -55968436 + Lx5 LINE L1 6454 7050 0 4 947 23 33 0 0 chr15 47527854 47527884 -55967090 + AT_rich Low_complexity Low_complexity 1 30 0 4 947 21 0 0 0 chr15 47528008 47528029 -55966945 + AT_rich Low_complexity Low_complexity 1 21 0 4 947 983 74 0 0 chr15 47528457 47528592 -55966382 - B1_Mm SINE Alu -12 135 1 4 947 3148 103 9 2 chr15 47528995 47529453 -55965521 + L1_Mus3 LINE L1 6170 6630 -8 4 947 439 367 7 0 chr15 47530491 47530630 -55964344 + B3 SINE B2 70 209 -7 5 947 22 56 0 0 chr15 47530682 47530718 -55964256 + AT_rich Low_complexity Low_complexity 1 36 0 5 947 13983 66 7 1 chr15 47532378 47534223 -55960751 + L1Md_F2 LINE L1 3732 5586 -297 5 947 7162 74 21 9 chr15 47534223 47535193 -55959781 + L1Md_F2 LINE L1 5587 6567 -15 5 947 403 280 87 16 chr15 47536014 47536141 -55958833 + ID_B1 SINE B4 89 224 0 5 947 349 260 21 70 chr15 47536398 47536584 -55958390 + L1MA8 LINE L1 6068 6244 -47 5 947 3682 89 41 4 chr15 47536686 47537217 -55957757 - Lx3_Mus LINE L1 -8 7001 6451 5 947 3077 99 47 0 chr15 47537217 47537260 -55957714 + L1_Mur1 LINE L1 5229 5271 -615 5 947 234 0 0 0 chr15 47537260 47537286 -55957688 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 5 947 3077 99 47 0 chr15 47537286 47537686 -55957288 + L1_Mur1 LINE L1 5272 5691 -195 5 947 5808 119 9 31 chr15 47539196 47540164 -55954810 + Lx3B LINE L1 6026 6972 -1 5 947 202 121 0 29 chr15 47540179 47540213 -55954761 + A-rich Low_complexity Low_complexity 2 34 0 5 947 594 330 91 42 chr15 47540309 47540664 -55954310 + MTEb LTR MaLR 1 356 -23 6 947 260 27 27 0 chr15 47540664 47540701 -55954273 + (TAAAA)n Simple_repeat Simple_repeat 1 38 0 6 947 32 67 0 0 chr15 47540772 47540832 -55954142 + AT_rich Low_complexity Low_complexity 1 60 0 6 947 973 114 0 0 chr15 47541315 47541455 -55953519 + B1_Mus1 SINE Alu 6 145 -3 6 947 711 0 0 0 chr15 47541457 47541536 -55953438 + (GAAA)n Simple_repeat Simple_repeat 3 81 0 6 947 26 64 0 0 chr15 47542327 47542374 -55952600 + AT_rich Low_complexity Low_complexity 1 47 0 6 947 21 0 0 0 chr15 47542730 47542751 -55952223 + AT_rich Low_complexity Low_complexity 1 21 0 6 947 22 0 0 0 chr15 47542811 47542833 -55952141 + AT_rich Low_complexity Low_complexity 1 22 0 6 947 213 145 15 75 chr15 47542900 47542967 -55952007 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 6 947 292 312 30 53 chr15 47543160 47543292 -55951682 - Lx6 LINE L1 -177 7283 7155 6 947 416 308 0 8 chr15 47543306 47543427 -55951547 + Lx6 LINE L1 6991 7110 -350 6 947 549 44 0 0 chr15 47543429 47543497 -55951477 + (TG)n Simple_repeat Simple_repeat 1 68 0 7 947 26 64 0 0 chr15 47543701 47543748 -55951226 + AT_rich Low_complexity Low_complexity 1 47 0 7 947 23 78 0 0 chr15 47544188 47544239 -55950735 + AT_rich Low_complexity Low_complexity 1 51 0 7 947 1544 323 125 21 chr15 47544389 47545504 -55949470 + Lx9 LINE L1 6185 7414 -230 7 947 1333 114 0 0 chr15 47546150 47546351 -55948623 + Lx3_Mus LINE L1 6142 6342 -667 7 947 2439 145 42 5 chr15 47546363 47546794 -55948180 - Lx2 LINE L1 -351 6646 6200 7 947 252 170 0 0 chr15 47546785 47546832 -55948142 + L1_Mur2 LINE L1 2840 2886 -1028 7 947 482 114 13 0 chr15 47546832 47546911 -55948063 + (GA)n Simple_repeat Simple_repeat 1 80 0 7 947 3269 94 40 0 chr15 47546911 47547413 -55947561 + L1_Mur2 LINE L1 2865 3386 -528 7 947 2390 116 59 3 chr15 47547426 47547799 -55947175 + RLTR9B LTR ERVK 42 435 -2 7 947 579 78 78 0 chr15 47547802 47547904 -55947070 + L1_Mur2 LINE L1 3384 3493 -421 7 947 373 100 12 24 chr15 47547907 47547989 -55946985 + (CAAAAA)n Simple_repeat Simple_repeat 5 85 0 7 947 1504 120 0 42 chr15 47548007 47548307 -55946667 + L1_Mur2 LINE L1 3477 3753 -2124 7 947 736 317 48 30 chr15 47548315 47548647 -55946327 - RMER1C Other Other -294 1048 711 8 947 600 263 43 172 chr15 47549832 47550302 -55944672 - L1_Rod LINE L1 -1451 4435 4012 8 947 424 278 34 34 chr15 47550304 47550453 -55944521 + B1_Mur2 SINE Alu 1 149 0 8 947 243 0 0 0 chr15 47550863 47550890 -55944084 + (GA)n Simple_repeat Simple_repeat 2 28 0 8 947 517 0 44 0 chr15 47551212 47551280 -55943694 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 8 947 357 111 0 0 chr15 47551282 47551345 -55943629 + Lx LINE L1 6592 6654 0 8 947 216 135 0 0 chr15 47551352 47551389 -55943585 + (TA)n Simple_repeat Simple_repeat 2 38 0 8 947 852 273 0 19 chr15 47552024 47552237 -55942737 + B3 SINE B2 1 209 -7 8 947 696 88 0 0 chr15 47552469 47552583 -55942391 + (GTTTG)n Simple_repeat Simple_repeat 1 114 0 8 947 207 0 0 0 chr15 47552583 47552606 -55942368 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 947 252 194 118 15 chr15 47553028 47553096 -55941878 + MER31-int LTR ERV1 3297 3371 -1565 9 947 429 230 0 0 chr15 47553192 47553318 -55941656 + (TG)n Simple_repeat Simple_repeat 1 126 0 9 947 868 182 40 0 chr15 47554046 47554222 -55940752 + Lx3B LINE L1 6788 6970 -3 9 947 29 28 0 0 chr15 47554224 47554260 -55940714 + AT_rich Low_complexity Low_complexity 1 36 0 9 947 504 0 0 0 chr15 47554260 47554316 -55940658 + (TATG)n Simple_repeat Simple_repeat 2 57 0 9 947 682 205 76 40 chr15 47554326 47554524 -55940450 + B3 SINE B2 1 205 -11 9 947 22 0 0 0 chr15 47554567 47554589 -55940385 + AT_rich Low_complexity Low_complexity 1 22 0 9 947 369 318 27 0 chr15 47555458 47555568 -55939406 + RSINE1 SINE B4 15 127 -38 9 947 1105 298 85 24 chr15 47556762 47557466 -55937508 + L1MA5 LINE L1 5544 6290 -10 9 947 27 0 0 0 chr15 47558732 47558759 -55936215 + AT_rich Low_complexity Low_complexity 1 27 0 9 947 255 402 80 44 chr15 47559902 47560240 -55934734 + L2c LINE L2 2939 3288 -99 1 947 21 0 0 0 chr15 47561175 47561196 -55933778 + AT_rich Low_complexity Low_complexity 1 21 0 1 947 580 316 89 53 chr15 47561508 47561812 -55933162 + ORR1E LTR MaLR 43 357 -2 1 947 601 327 113 34 chr15 47561853 47562685 -55932289 + L1MB1 LINE L1 3292 4192 -1951 1 947 368 315 117 7 chr15 47562740 47563047 -55931927 + L1MB1 LINE L1 5828 6168 0 1 947 775 235 35 5 chr15 47563233 47563434 -55931540 - Lx7 LINE L1 0 7696 7490 1 947 1414 239 165 3 chr15 47567778 47568135 -55926839 + MTC LTR MaLR 1 415 -6 1 947 450 0 0 0 chr15 47569627 47569677 -55925297 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 947 2798 294 88 24 chr15 47570734 47571739 -55923235 + Lx8 LINE L1 6225 7293 -180 1 947 325 211 56 0 chr15 47571793 47571864 -55923110 - HAL1-3A_ME LINE L1 -809 2049 1975 1 947 240 342 79 73 chr15 47571880 47572044 -55922930 - RSINE1 SINE B4 0 165 1 1 947 230 341 12 0 chr15 47572179 47572261 -55922713 + MLT1A1 LTR MaLR 62 144 -264 1 947 184 333 87 0 chr15 47573374 47573443 -55921531 - MIRb SINE MIR -169 99 25 1 947 1212 269 46 14 chr15 47573531 47573946 -55921028 - L1_Mur3 LINE L1 -3746 2134 1707 1 947 23 0 0 0 chr15 47574248 47574271 -55920703 + AT_rich Low_complexity Low_complexity 1 23 0 1 947 234 81 0 0 chr15 47574414 47574451 -55920523 + (CAGA)n Simple_repeat Simple_repeat 4 40 0 1 947 257 16 95 16 chr15 47574504 47574567 -55920407 + (TCTCCC)n Simple_repeat Simple_repeat 2 69 0 1 947 848 116 29 11 chr15 47574567 47574741 -55920233 + CT-rich Low_complexity Low_complexity 3 179 0 1 947 563 40 14 0 chr15 47574827 47574901 -55920073 + (TC)n Simple_repeat Simple_repeat 2 76 0 1 947 425 19 19 0 chr15 47574979 47575033 -55919941 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 947 549 74 12 0 chr15 47575033 47575114 -55919860 + RMER17B LTR ERVK 382 463 -495 1 947 528 250 174 7 chr15 47575369 47575518 -55919456 - B3A SINE B2 -9 189 16 1 947 225 213 33 0 chr15 47575705 47575766 -55919208 + (TAGA)n Simple_repeat Simple_repeat 1 63 0 1 947 191 284 151 45 chr15 47576135 47576334 -55918640 + L2 LINE L2 2424 2643 -776 1 947 1235 251 177 28 chr15 47576450 47576924 -55918050 + Lx5 LINE L1 6459 7132 -328 1 947 459 0 0 0 chr15 47576924 47576975 -55917999 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 947 423 0 0 0 chr15 47576975 47577021 -55917953 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 947 1235 250 172 26 chr15 47577021 47577106 -55917868 + Lx5 LINE L1 6763 6812 -238 1 947 1196 223 84 21 chr15 47577106 47577325 -55917649 + BGLII_B LTR ERVK 1 236 -205 1 947 501 17 0 0 chr15 47577325 47577383 -55917591 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 947 1196 223 84 21 chr15 47577383 47577497 -55917477 + BGLII_B LTR ERVK 237 354 -87 1 947 388 198 81 0 chr15 47577593 47577679 -55917295 + BGLII_B LTR ERVK 349 441 0 1 947 506 306 35 61 chr15 47577679 47577877 -55917097 + Lx5 LINE L1 6849 7041 -9 1 947 258 105 0 0 chr15 47578074 47578112 -55916862 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 947 186 43 0 0 chr15 47578527 47578550 -55916424 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 948 733 232 91 5 chr15 47579810 47580009 -55914965 - B3 SINE B2 0 216 1 1 948 462 317 83 18 chr15 47580057 47580285 -55914689 - MLT-int LTR MaLR -91 1644 1402 1 948 191 132 29 29 chr15 47580696 47580766 -55914208 + T-rich Low_complexity Low_complexity 4 73 0 1 948 460 241 31 35 chr15 47580770 47580914 -55914060 - PB1D9 SINE Alu -1 147 1 1 948 288 0 0 0 chr15 47581454 47581486 -55913488 + (A)n Simple_repeat Simple_repeat 1 32 0 1 948 226 315 101 53 chr15 47581765 47581953 -55913021 - MLT-int LTR MaLR -934 801 605 1 948 233 294 109 7 chr15 47581950 47582087 -55912887 - MLT-int LTR MaLR -1059 676 526 1 948 398 20 0 19 chr15 47582088 47582140 -55912834 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1 948 212 337 82 24 chr15 47582156 47582241 -55912733 - PB1 SINE Alu -35 92 3 1 948 374 311 199 37 chr15 47582248 47582624 -55912350 - MLT-int LTR MaLR -1214 521 39 1 948 406 272 113 60 chr15 47582702 47582870 -55912104 - MLT1A0 LTR MaLR -107 258 82 1 948 574 248 105 5 chr15 47584112 47584355 -55910619 + L1M2 LINE L1 3735 4005 -2141 1 948 313 188 57 21 chr15 47584356 47584497 -55910477 + (TATAA)n Simple_repeat Simple_repeat 5 150 0 1 948 503 234 118 79 chr15 47584543 47584822 -55910152 + L1M2 LINE L1 4092 4381 -1762 1 948 349 306 77 5 chr15 47584994 47585188 -55909786 + L1M2 LINE L1 5049 5256 -887 1 948 207 79 79 0 chr15 47587671 47587709 -55907265 + A-rich Low_complexity Low_complexity 1 41 0 1 948 22 56 0 0 chr15 47588248 47588284 -55906690 + AT_rich Low_complexity Low_complexity 1 36 0 1 948 195 232 0 0 chr15 47588857 47588913 -55906061 + GA-rich Low_complexity Low_complexity 2 57 0 1 948 221 300 33 0 chr15 47588942 47589002 -55905972 - B1_Mur4 SINE Alu -88 62 1 1 948 216 149 0 0 chr15 47589190 47589237 -55905737 + (A)n Simple_repeat Simple_repeat 1 47 0 1 948 2004 25 4 0 chr15 47589445 47589685 -55905289 - L1_Mm LINE L1 -3547 2336 2096 1 948 5496 31 0 0 chr15 47589685 47590375 -55904599 + L1Md_T LINE L1 5934 6582 0 1 948 30 0 0 0 chr15 47590438 47590468 -55904506 + AT_rich Low_complexity Low_complexity 1 30 0 1 948 414 374 116 18 chr15 47590928 47591317 -55903657 - Lx8 LINE L1 -8 7465 7039 1 948 294 95 0 0 chr15 47591960 47592002 -55902972 + (A)n Simple_repeat Simple_repeat 1 42 0 1 948 24 77 0 0 chr15 47592160 47592212 -55902762 + AT_rich Low_complexity Low_complexity 1 52 0 1 948 414 57 0 0 chr15 47592697 47592750 -55902224 + (TTG)n Simple_repeat Simple_repeat 2 54 0 1 948 573 319 91 82 chr15 47593388 47593706 -55901268 + MER31A LTR ERV1 97 432 -53 1 948 335 362 92 0 chr15 47593722 47593863 -55901111 - RSINE1 SINE B4 -6 159 6 1 948 208 225 0 0 chr15 47594193 47594233 -55900741 + GA-rich Low_complexity Low_complexity 3 42 0 1 948 221 292 13 77 chr15 47594475 47594553 -55900421 + ID SINE ID 1 73 -151 1 948 288 301 94 36 chr15 47594741 47594879 -55900095 + MIR SINE MIR 108 253 -9 1 948 24 32 0 0 chr15 47596653 47596684 -55898290 + AT_rich Low_complexity Low_complexity 1 31 0 1 948 21 82 0 0 chr15 47596923 47596972 -55898002 + AT_rich Low_complexity Low_complexity 1 49 0 1 948 23 0 0 0 chr15 47597162 47597185 -55897789 + AT_rich Low_complexity Low_complexity 1 23 0 1 948 219 36 0 0 chr15 47597477 47597505 -55897469 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 1 948 283 322 11 54 chr15 47597505 47597597 -55897377 - RSINE1 SINE B4 -69 96 9 1 948 192 77 0 0 chr15 47598385 47598411 -55896563 + (A)n Simple_repeat Simple_repeat 1 26 0 1 948 21 0 0 0 chr15 47598646 47598667 -55896307 + AT_rich Low_complexity Low_complexity 1 21 0 1 948 579 66 0 0 chr15 47598707 47598783 -55896191 + (TG)n Simple_repeat Simple_repeat 1 76 0 1 948 482 342 0 0 chr15 47598799 47598913 -55896061 - B3A SINE B2 -76 122 9 1 948 332 197 29 43 chr15 47599007 47599145 -55895829 + (TA)n Simple_repeat Simple_repeat 2 137 0 1 948 21 36 0 0 chr15 47599207 47599235 -55895739 + AT_rich Low_complexity Low_complexity 1 28 0 1 948 2057 187 47 17 chr15 47599707 47600109 -55894865 + MTC LTR MaLR 6 419 -2 1 948 398 224 235 28 chr15 47601140 47601319 -55893655 - B3 SINE B2 0 216 1 1 948 407 245 430 23 chr15 47601575 47601767 -55893207 + MTE2b LTR MaLR 50 321 -58 1 948 1786 142 73 12 chr15 47601767 47602094 -55892880 + RMER6-int LTR ERVK 662 1008 -2169 1 948 547 128 128 0 chr15 47602072 47602174 -55892800 + RMER6-int LTR ERVK 1114 1228 -1949 1 948 3715 159 116 94 chr15 47602315 47602616 -55892358 + RMER6-int LTR ERVK 2208 2536 -641 1 948 332 222 0 31 chr15 47602616 47602681 -55892293 + LSU-rRNA_Hsa rRNA rRNA 1777 1839 -3196 1 948 3715 159 116 94 chr15 47602681 47603259 -55891715 + RMER6-int LTR ERVK 2537 3171 -6 1 948 1616 167 70 3 chr15 47603264 47603576 -55891398 + RMER6C LTR ERVK 1 333 -357 1 948 375 89 0 0 chr15 47603576 47603632 -55891342 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 948 591 311 134 18 chr15 47603729 47604004 -55890970 + Lx8 LINE L1 6339 6645 -828 1 948 1541 264 30 40 chr15 47604009 47604439 -55890535 + Lx7 LINE L1 6917 7342 -354 1 948 1986 104 18 48 chr15 47604463 47604795 -55890179 - L1_Mur2 LINE L1 -1666 4211 3890 1 948 22 56 0 0 chr15 47604851 47604887 -55890087 + AT_rich Low_complexity Low_complexity 1 36 0 1 948 703 219 12 17 chr15 47604887 47605059 -55889915 + Lx7 LINE L1 7526 7696 0 1 948 189 0 0 0 chr15 47605080 47605101 -55889873 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 948 237 65 0 0 chr15 47605249 47605280 -55889694 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 1 948 448 353 23 83 chr15 47605519 47605868 -55889106 + LTR73 LTR ERV1 21 348 -224 1 948 405 0 0 0 chr15 47606011 47606056 -55888918 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 948 1885 194 11 55 chr15 47606174 47606555 -55888419 + ORR1C1 LTR MaLR 7 370 -8 1 948 657 180 0 0 chr15 47607377 47607505 -55887469 + (TAG)n Simple_repeat Simple_repeat 1 128 0 1 948 1336 244 67 9 chr15 47607857 47608184 -55886790 - Lx9 LINE L1 -714 6930 6585 1 948 303 223 45 15 chr15 47608196 47608328 -55886646 + Lx9 LINE L1 7509 7644 0 1 948 1034 202 23 72 chr15 47608414 47608676 -55886298 - Lx4A LINE L1 -4 7054 6806 1 948 383 291 0 25 chr15 47609307 47609388 -55885586 - ID SINE ID -144 80 2 1 948 22 0 0 0 chr15 47609806 47609828 -55885146 + AT_rich Low_complexity Low_complexity 1 22 0 1 948 446 224 41 0 chr15 47610941 47611039 -55883935 + MYSERV6-int LTR ERVK 1327 1428 -7531 1 948 3575 161 43 29 chr15 47611196 47611891 -55883083 + MYSERV6-int LTR ERVK 8255 8959 0 1 948 194 0 39 0 chr15 47611894 47611920 -55883054 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 1 948 3804 51 13 2 chr15 47612090 47612565 -55882409 - L1Md_F2 LINE L1 -2 6580 6101 1 948 1087 224 111 8 chr15 47612603 47612864 -55882110 + Lx2B LINE L1 6335 6622 -378 1 948 565 182 9 0 chr15 47612866 47612976 -55881998 + ORR1C1 LTR MaLR 266 376 -2 1 948 213 178 0 0 chr15 47613083 47613128 -55881846 + CT-rich Low_complexity Low_complexity 1 45 0 1 948 387 0 0 0 chr15 47613661 47613704 -55881270 + (TTCC)n Simple_repeat Simple_repeat 3 45 0 1 948 413 76 0 15 chr15 47614273 47614340 -55880634 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 948 450 0 0 0 chr15 47614404 47614454 -55880520 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 948 1902 212 31 3 chr15 47615660 47616043 -55878931 - ORR1B1 LTR MaLR 0 394 1 1 948 531 305 31 41 chr15 47616104 47616299 -55878675 - B3A SINE B2 -2 196 4 2 948 25 31 0 0 chr15 47616508 47616540 -55878434 + AT_rich Low_complexity Low_complexity 1 32 0 2 948 233 213 21 0 chr15 47616775 47616822 -55878152 - B3A SINE B2 -150 48 1 2 948 1034 252 10 60 chr15 47619208 47619508 -55875466 - Lx7 LINE L1 -342 7354 7070 2 948 1063 47 74 0 chr15 47619522 47619671 -55875303 - ORR1B1-int LTR MaLR -14 1778 1619 1 948 12853 66 25 14 chr15 47619680 47621452 -55873522 - ORR1A1-int LTR MaLR 0 1792 1 2 948 2819 58 0 6 chr15 47621452 47621800 -55873174 - ORR1A1 LTR MaLR 0 346 1 2 948 317 244 58 11 chr15 47621800 47621887 -55873087 - Lx7 LINE L1 -656 7040 6950 2 948 1189 233 164 2 chr15 47621898 47622428 -55872546 + Lx7 LINE L1 6304 6919 -777 2 948 290 132 19 0 chr15 47623495 47623548 -55871426 + CT-rich Low_complexity Low_complexity 1 54 0 2 948 4165 122 8 19 chr15 47623548 47624197 -55870777 - Lx LINE L1 -1 6653 6012 2 948 290 278 31 0 chr15 47624250 47624261 -55870713 - B4 SINE B4 -192 100 1 2 948 675 70 0 0 chr15 47624261 47624347 -55870627 - BC1_Mm scRNA scRNA -66 86 1 2 948 261 282 0 14 chr15 47624577 47624649 -55870325 - PB1D10 SINE Alu -2 115 45 2 948 408 291 101 74 chr15 47625309 47625498 -55869476 - B3A SINE B2 0 198 5 2 948 24 32 0 0 chr15 47626042 47626073 -55868901 + AT_rich Low_complexity Low_complexity 1 31 0 2 948 180 352 84 23 chr15 47626217 47626348 -55868626 - L3 LINE CR1 -106 4383 4245 2 948 33 25 0 0 chr15 47627328 47627368 -55867606 + AT_rich Low_complexity Low_complexity 1 40 0 2 948 1996 175 77 52 chr15 47627405 47627887 -55867087 - RLTR20B3 LTR ERVK -63 514 21 2 948 1519 129 50 19 chr15 47627977 47628238 -55866736 + Lx LINE L1 6386 6654 0 2 948 716 229 96 6 chr15 47628277 47628444 -55866530 + MTC LTR MaLR 196 377 -44 2 948 270 0 0 0 chr15 47628444 47628474 -55866500 + (T)n Simple_repeat Simple_repeat 1 30 0 2 948 219 368 46 0 chr15 47628512 47628599 -55866375 + RSINE1 SINE B4 51 141 -24 2 948 31 92 0 0 chr15 47628901 47628988 -55865986 + AT_rich Low_complexity Low_complexity 1 87 0 2 948 228 67 0 0 chr15 47629304 47629334 -55865640 + (A)n Simple_repeat Simple_repeat 1 30 0 2 948 441 95 0 0 chr15 47629560 47629623 -55865351 + (TA)n Simple_repeat Simple_repeat 1 63 0 2 948 28 0 0 0 chr15 47629678 47629706 -55865268 + AT_rich Low_complexity Low_complexity 1 28 0 2 948 429 95 0 0 chr15 47629746 47629809 -55865165 + (CA)n Simple_repeat Simple_repeat 2 64 0 2 948 6815 72 1 11 chr15 47630452 47631369 -55863605 + L1Md_F2 LINE L1 5675 6582 0 2 948 1085 231 156 7 chr15 47632513 47632801 -55862173 + RMER1B Other Other 44 374 -692 2 948 1911 242 123 102 chr15 47632819 47633825 -55861149 + RMER1A Other Other 15 1060 -6 2 948 24 0 0 0 chr15 47633882 47633906 -55861068 + AT_rich Low_complexity Low_complexity 1 24 0 2 948 445 309 58 32 chr15 47636038 47636192 -55858782 - RSINE1 SINE B4 -4 161 4 2 948 22 0 0 0 chr15 47636286 47636308 -55858666 + AT_rich Low_complexity Low_complexity 1 22 0 2 948 21 36 0 0 chr15 47637943 47637971 -55857003 + AT_rich Low_complexity Low_complexity 1 28 0 2 948 560 207 116 0 chr15 47638697 47638818 -55856156 + B1_Mus2 SINE Alu 6 140 -7 2 948 396 326 87 71 chr15 47638936 47639190 -55855784 + B4A SINE B4 5 262 -30 2 948 431 63 16 0 chr15 47639228 47639291 -55855683 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 948 250 325 62 16 chr15 47639777 47639905 -55855069 + LTR52 LTR ERVL 26 159 -262 2 948 2364 166 21 60 chr15 47640330 47640810 -55854164 + RLTR25A LTR ERVK 1 461 -642 2 948 234 173 0 37 chr15 47641017 47641071 -55853903 + A-rich Low_complexity Low_complexity 4 55 0 2 948 924 317 105 27 chr15 47641132 47641731 -55853243 + HERVL74-int LTR ERVL 1125 1770 -3915 2 948 399 399 31 9 chr15 47642200 47642425 -55852549 + HERVL74-int LTR ERVL 2729 2958 -598 2 948 418 160 16 8 chr15 47643816 47643942 -55851032 + (TCTG)n Simple_repeat Simple_repeat 4 130 0 2 948 663 277 14 0 chr15 47643965 47644106 -55850868 - RSINE1 SINE B4 -17 148 6 2 948 1169 68 0 0 chr15 47644178 47644325 -55850649 - B1_Mus2 SINE Alu 0 147 1 2 948 411 370 6 24 chr15 47645775 47645941 -55849033 + RSINE1 SINE B4 3 165 0 2 948 414 0 0 0 chr15 47646106 47646152 -55848822 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 948 2533 144 5 2 chr15 47646786 47647182 -55847792 + Lx2 LINE L1 6238 6634 -363 2 948 1411 109 9 22 chr15 47647183 47647407 -55847567 + Lx2 LINE L1 6766 6986 -11 2 948 235 344 99 7 chr15 47647672 47647824 -55847150 + MLT1C LTR MaLR 288 453 -14 2 948 21 0 0 0 chr15 47648323 47648344 -55846630 + AT_rich Low_complexity Low_complexity 1 21 0 2 948 24 53 0 0 chr15 47648514 47648552 -55846422 + AT_rich Low_complexity Low_complexity 1 38 0 2 948 23 0 0 0 chr15 47651651 47651674 -55843300 + AT_rich Low_complexity Low_complexity 1 23 0 2 948 25 0 0 0 chr15 47652022 47652047 -55842927 + AT_rich Low_complexity Low_complexity 1 25 0 2 948 261 0 0 0 chr15 47652330 47652359 -55842615 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 948 964 154 12 0 chr15 47652502 47652664 -55842310 + URR1A DNA MER1_type 59 222 -4 2 948 2023 164 66 3 chr15 47653359 47653725 -55841249 + Lx2B LINE L1 6608 6996 -4 2 948 342 152 0 0 chr15 47653861 47653920 -55841054 + (CTA)n Simple_repeat Simple_repeat 1 59 0 2 948 693 103 44 0 chr15 47653948 47654084 -55840890 + (TCTCTG)n Simple_repeat Simple_repeat 3 144 0 2 948 29 0 0 0 chr15 47654440 47654469 -55840505 + AT_rich Low_complexity Low_complexity 1 29 0 2 948 494 307 100 28 chr15 47654549 47654825 -55840149 + MTE-int LTR MaLR 102 400 -1180 2 948 1211 356 111 28 chr15 47654888 47655599 -55839375 + MTE-int LTR MaLR 772 1578 -2 2 948 984 272 45 45 chr15 47655633 47655922 -55839052 + MTE2b LTR MaLR 88 376 -3 2 948 308 332 12 78 chr15 47656630 47656662 -55838312 - CYRA11_Mm Unknown Y-chromosome -201 416 315 2 948 862 178 28 11 chr15 47656662 47656838 -55838136 + URR1B DNA MER1_type 1 179 -46 2 948 308 332 12 78 chr15 47656838 47656875 -55838099 - CYRA11_Mm Unknown Y-chromosome -201 314 188 2 948 1774 253 12 7 chr15 47657567 47657985 -55836989 + Lx6 LINE L1 7023 7442 -18 2 948 239 355 72 52 chr15 47658762 47658955 -55836019 + MamRep137 DNA TcMar? 155 351 -93 2 948 321 221 42 42 chr15 47659056 47659174 -55835800 - Lx7 LINE L1 -1 7695 7578 2 948 561 72 0 0 chr15 47659182 47659265 -55835709 + (TC)n Simple_repeat Simple_repeat 2 84 0 2 948 339 25 0 0 chr15 47659265 47659305 -55835669 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 948 1210 218 8 4 chr15 47659324 47659587 -55835387 - Lx6 LINE L1 -308 5572 5309 2 948 2323 235 65 14 chr15 47659590 47660228 -55834746 + Lx6 LINE L1 5665 6273 -1187 2 948 1160 81 0 0 chr15 47660228 47660376 -55834598 - B1_Mus1 SINE Alu 0 148 1 2 948 2213 304 69 84 chr15 47660376 47661123 -55833851 + Lx6 LINE L1 6246 7032 -18 2 948 261 83 0 0 chr15 47661135 47661171 -55833803 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 2 948 241 211 28 14 chr15 47661293 47661365 -55833609 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 948 466 338 48 42 chr15 47662553 47662720 -55832254 - B3A SINE B2 -29 169 2 2 948 323 379 29 15 chr15 47663088 47663294 -55831680 - L1MB7 LINE L1 -19 6165 5957 2 948 1197 118 11 16 chr15 47663803 47663993 -55830981 + B2_Mm2 SINE B2 2 190 -5 2 948 599 39 13 0 chr15 47664411 47664489 -55830485 + (GA)n Simple_repeat Simple_repeat 1 79 0 2 948 699 246 31 73 chr15 47664751 47665010 -55829964 + Charlie4a DNA MER1_type 43 290 -218 2 948 651 306 60 0 chr15 47665061 47665313 -55829661 + Lx8 LINE L1 6793 7059 -414 2 948 2322 113 133 0 chr15 47665321 47665703 -55829271 - L1VL4 LINE L1 -5675 627 195 2 948 22 0 0 0 chr15 47665706 47665728 -55829246 + AT_rich Low_complexity Low_complexity 1 22 0 2 948 1766 133 21 91 chr15 47665844 47666184 -55828790 - ORR1A4 LTR MaLR -13 316 1 2 948 7474 149 147 96 chr15 47666184 47667624 -55827350 - ORR1A4-int LTR MaLR 0 1963 450 2 948 2308 85 3 32 chr15 47667619 47667959 -55827015 - L1Md_F2 LINE L1 0 6582 6253 2 948 7474 159 151 82 chr15 47667959 47668359 -55826615 - ORR1A4-int LTR MaLR -1507 456 1 2 948 1328 167 193 0 chr15 47668363 47668632 -55826342 - ORR1A4 LTR MaLR -8 321 1 2 948 214 115 63 13 chr15 47670557 47670636 -55824338 + (CAAA)n Simple_repeat Simple_repeat 1 83 0 2 948 255 314 86 0 chr15 47670796 47670936 -55824038 + MER2 DNA MER2_type 82 233 -112 2 948 656 24 24 0 chr15 47672270 47672355 -55822619 + (TATATG)n Simple_repeat Simple_repeat 2 88 0 2 948 296 322 41 6 chr15 47673260 47673432 -55821542 + L1M5 LINE L1 4425 4602 -1544 2 948 269 369 113 49 chr15 47673549 47673877 -55821097 + ORR1E LTR MaLR 1 349 -10 2 948 906 175 26 11 chr15 47674231 47674422 -55820552 - Lx2 LINE L1 0 6997 6804 2 948 2902 179 51 6 chr15 47674422 47674968 -55820006 - Lx2 LINE L1 -458 6539 5969 2 948 417 109 0 0 chr15 47675677 47675741 -55819233 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 948 1311 213 163 24 chr15 47675833 47676170 -55818804 - ORR1C2 LTR MaLR 0 384 1 2 948 4019 99 7 0 chr15 47676484 47677038 -55817936 - L1_Mus4 LINE L1 0 6636 6079 2 948 424 375 64 34 chr15 47677695 47677960 -55817014 + B4A SINE B4 14 286 -6 2 948 251 66 47 47 chr15 47678950 47679014 -55815960 + A-rich Low_complexity Low_complexity 2 65 0 2 948 21 36 0 0 chr15 47679979 47680007 -55814967 + AT_rich Low_complexity Low_complexity 1 28 0 2 948 1539 17 0 0 chr15 47680465 47680643 -55814331 + (GAA)n Simple_repeat Simple_repeat 2 179 0 2 948 879 160 0 0 chr15 47680643 47680799 -55814175 + GA-rich Low_complexity Low_complexity 1 156 0 2 948 978 88 0 0 chr15 47681573 47681720 -55813254 + (CA)n Simple_repeat Simple_repeat 1 147 0 2 948 538 370 92 50 chr15 47682886 47683387 -55811587 + MER92B LTR ERV1 46 567 -69 2 948 702 162 48 21 chr15 47684476 47684621 -55810353 - B1_Mur4 SINE Alu 0 150 2 2 948 34 79 0 0 chr15 47684963 47685039 -55809935 + AT_rich Low_complexity Low_complexity 1 76 0 2 948 490 342 34 0 chr15 47685039 47685185 -55809789 - RSINE1 SINE B4 -12 153 3 2 948 23 0 0 0 chr15 47687074 47687097 -55807877 + AT_rich Low_complexity Low_complexity 1 23 0 2 948 262 119 91 106 chr15 47688262 47688339 -55806635 + RMER17C LTR ERVK 80 147 -263 2 948 1206 78 0 0 chr15 47688339 47688519 -55806455 + (TCC)n Simple_repeat Simple_repeat 1 180 0 3 948 262 119 91 106 chr15 47688519 47688639 -55806335 + RMER17C LTR ERVK 148 274 -136 2 948 27 0 0 0 chr15 47689296 47689323 -55805651 + AT_rich Low_complexity Low_complexity 1 27 0 3 948 2069 142 12 0 chr15 47689650 47689995 -55804979 + Lx3B LINE L1 6624 6972 -1 3 948 21 0 0 0 chr15 47690003 47690024 -55804950 + AT_rich Low_complexity Low_complexity 1 21 0 3 948 195 170 0 0 chr15 47690203 47690250 -55804724 + A-rich Low_complexity Low_complexity 1 47 0 3 948 541 291 97 99 chr15 47690255 47690627 -55804347 - MTE2a LTR MaLR -55 364 10 3 948 236 176 34 34 chr15 47690733 47690821 -55804153 + GA-rich Low_complexity Low_complexity 2 89 0 3 948 740 309 67 114 chr15 47691023 47691410 -55803564 + MTE2a LTR MaLR 2 370 -9 3 948 367 272 93 40 chr15 47691754 47691957 -55803017 + L1MD2 LINE L1 6046 6235 -124 3 948 204 152 45 0 chr15 47693352 47693418 -55801556 + (TA)n Simple_repeat Simple_repeat 1 69 0 3 948 1518 33 28 0 chr15 47694291 47694472 -55800502 - B2_Mm1t SINE B2 -6 187 2 3 948 23 0 0 0 chr15 47694835 47694858 -55800116 + AT_rich Low_complexity Low_complexity 1 23 0 3 948 5555 131 16 37 chr15 47694987 47695942 -55799032 + Lx3B LINE L1 6039 6973 0 3 948 562 377 11 35 chr15 47696105 47696391 -55798583 - B4 SINE B4 -12 280 2 3 948 22 70 0 0 chr15 47697080 47697123 -55797851 + AT_rich Low_complexity Low_complexity 1 43 0 3 948 1792 168 48 183 chr15 47698202 47698699 -55796275 + RLTR23 LTR ERV1 1 430 0 3 948 835 289 90 5 chr15 47699744 47700133 -55794841 + L1MB1 LINE L1 5491 5912 -256 3 948 426 20 0 0 chr15 47700143 47700194 -55794780 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 3 948 4095 104 127 10 chr15 47701058 47701380 -55793594 + RMER17A LTR ERVK 1 400 -351 3 948 380 77 0 15 chr15 47701380 47701446 -55793528 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 3 948 4095 104 127 10 chr15 47701446 47701793 -55793181 + RMER17A LTR ERVK 401 747 -4 3 948 25 0 0 0 chr15 47702110 47702135 -55792839 + AT_rich Low_complexity Low_complexity 1 25 0 3 948 421 375 52 20 chr15 47702198 47702503 -55792471 + MTE-int LTR MaLR 1 315 -1265 3 948 369 278 93 0 chr15 47702567 47702675 -55792299 + MTE-int LTR MaLR 1355 1472 -108 3 948 462 279 91 23 chr15 47702772 47703036 -55791938 + RLTR12B LTR ERVK 47 328 -200 3 948 326 159 0 14 chr15 47703038 47703108 -55791866 + GA-rich Low_complexity Low_complexity 2 70 0 3 948 1347 72 0 0 chr15 47703108 47703288 -55791686 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 3 948 310 251 98 117 chr15 47703290 47703587 -55791387 + RLTR11A2 LTR ERVK 215 505 -23 3 948 347 342 13 44 chr15 47703644 47703803 -55791171 + ORR1E LTR MaLR 44 197 -162 3 948 621 277 77 5 chr15 47703943 47704139 -55790835 - B3 SINE B2 -6 210 1 3 948 201 222 32 0 chr15 47704192 47704255 -55790719 + (TA)n Simple_repeat Simple_repeat 1 65 0 3 948 21 36 0 0 chr15 47704486 47704514 -55790460 + AT_rich Low_complexity Low_complexity 1 28 0 3 948 315 0 0 0 chr15 47704523 47704558 -55790416 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 948 552 390 66 31 chr15 47704738 47705119 -55789855 - BLACKJACK DNA AcHobo -2387 557 164 3 948 652 287 62 11 chr15 47705415 47705591 -55789383 + MTD LTR MaLR 2 186 -233 3 948 390 101 0 0 chr15 47705607 47705676 -55789298 + (T)n Simple_repeat Simple_repeat 1 69 0 3 948 1191 34 0 13 chr15 47705681 47705830 -55789144 - B1_Mm SINE Alu 0 147 1 3 948 481 269 92 0 chr15 47705842 47705972 -55789002 + MTD LTR MaLR 193 334 -85 3 948 23 86 0 0 chr15 47706864 47706922 -55788052 + AT_rich Low_complexity Low_complexity 1 58 0 3 948 952 234 304 62 chr15 47707050 47707534 -55787440 + MT2B LTR ERVL 1 601 0 3 948 1068 116 0 0 chr15 47707599 47707745 -55787229 - B1_Mus2 SINE Alu -1 146 1 3 948 198 239 179 0 chr15 47707759 47707826 -55787148 - L2a LINE L2 -10 3416 3338 3 948 2426 57 0 0 chr15 47708364 47708663 -55786311 + L1_Mus1 LINE L1 6193 6491 -76 3 948 269 155 0 17 chr15 47709066 47709125 -55785849 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 948 1378 238 60 20 chr15 47709450 47709853 -55785121 + MTD LTR MaLR 1 419 0 3 949 229 371 113 0 chr15 47710245 47710369 -55784605 + MIRc SINE MIR 82 219 -49 3 949 226 221 49 25 chr15 47711124 47711286 -55783688 + (TATAA)n Simple_repeat Simple_repeat 2 167 0 3 949 27 49 0 0 chr15 47711298 47711339 -55783635 + AT_rich Low_complexity Low_complexity 1 41 0 3 949 6231 86 120 15 chr15 47711343 47712269 -55782705 + RLTR13D5 LTR ERVK 1 1023 0 3 949 234 250 19 0 chr15 47712557 47712609 -55782365 + MER46C DNA MER2_type 276 328 -10 3 949 245 386 52 19 chr15 47713371 47713618 -55781356 - MIR SINE MIR 0 262 4 3 949 315 0 0 0 chr15 47714026 47714061 -55780913 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 3 949 960 131 0 0 chr15 47714070 47714215 -55780759 - B1_Mus1 SINE Alu -2 146 2 3 949 198 0 0 0 chr15 47714549 47714571 -55780403 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 3 949 405 0 0 0 chr15 47714575 47714620 -55780354 + (TTA)n Simple_repeat Simple_repeat 2 46 0 3 949 1067 84 0 0 chr15 47714621 47714764 -55780210 - B1_Mus1 SINE Alu -4 144 2 3 949 1584 36 5 0 chr15 47716137 47716333 -55778641 + L1_Mus1 LINE L1 6367 6563 -4 3 949 195 42 0 0 chr15 47716336 47716360 -55778614 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 3 949 418 238 110 75 chr15 47716502 47716675 -55778299 + MLT2C1 LTR ERVL 20 198 -199 3 949 525 71 0 0 chr15 47716687 47716757 -55778217 + (GGGA)n Simple_repeat Simple_repeat 3 72 0 3 949 506 43 14 0 chr15 47716755 47716824 -55778150 + (GAAAA)n Simple_repeat Simple_repeat 1 70 0 3 949 1137 256 58 44 chr15 47717168 47717532 -55777442 - MTD LTR MaLR -49 370 2 3 949 5242 36 13 2 chr15 47717790 47718426 -55776548 - L1Md_T LINE L1 0 6582 5940 3 949 25 0 0 0 chr15 47720515 47720540 -55774434 + AT_rich Low_complexity Low_complexity 1 25 0 3 949 782 300 132 13 chr15 47720692 47720980 -55773994 + ORR1E LTR MaLR 10 335 -24 3 949 3184 117 52 2 chr15 47720980 47721485 -55773489 + L1_Mus4 LINE L1 6107 6636 0 3 949 782 300 132 13 chr15 47721485 47721500 -55773474 + ORR1E LTR MaLR 336 349 -10 3 949 2570 181 17 7 chr15 47721710 47722249 -55772725 + MusHAL1 LINE L1 1155 1698 -1014 3 949 7829 134 34 2 chr15 47722246 47723490 -55771484 + Lx2A1 LINE L1 5720 7003 -5 3 949 587 322 80 39 chr15 47723479 47723918 -55771056 - L1MB1 LINE L1 -62 6127 5671 3 949 34 0 0 0 chr15 47723920 47723954 -55771020 + AT_rich Low_complexity Low_complexity 1 34 0 3 949 1672 263 101 15 chr15 47725144 47725688 -55769286 + Lx9 LINE L1 7025 7615 -29 3 949 34 0 0 0 chr15 47725724 47725758 -55769216 + AT_rich Low_complexity Low_complexity 1 34 0 3 949 25 65 0 0 chr15 47725840 47725886 -55769088 + AT_rich Low_complexity Low_complexity 1 46 0 3 949 21 0 0 0 chr15 47726356 47726377 -55768597 + AT_rich Low_complexity Low_complexity 1 21 0 3 949 495 0 0 0 chr15 47728722 47728777 -55766197 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 3 949 7540 122 9 12 chr15 47728914 47730114 -55764860 + Lx3A LINE L1 5766 6962 -19 3 949 300 53 0 0 chr15 47730120 47730158 -55764816 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 3 949 429 256 199 6 chr15 47730412 47730593 -55764381 - B3 SINE B2 0 216 1 3 949 381 22 0 0 chr15 47731467 47731513 -55763461 + (TATG)n Simple_repeat Simple_repeat 3 48 0 3 949 23 54 0 0 chr15 47731718 47731755 -55763219 + AT_rich Low_complexity Low_complexity 1 37 0 3 949 634 197 29 0 chr15 47731955 47732092 -55762882 + B1_Mus1 SINE Alu 7 147 -1 3 949 180 77 0 0 chr15 47732174 47732200 -55762774 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 949 1191 224 87 34 chr15 47732453 47732808 -55762166 + ORR1D1 LTR MaLR 1 374 0 3 949 26 30 0 0 chr15 47733593 47733626 -55761348 + AT_rich Low_complexity Low_complexity 1 33 0 3 949 1130 69 0 0 chr15 47733721 47733866 -55761108 + B1_Mus2 SINE Alu 2 146 -1 3 949 211 0 57 29 chr15 47733867 47733902 -55761072 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 3 949 208 138 66 49 chr15 47734028 47734089 -55760885 + T-rich Low_complexity Low_complexity 5 66 0 3 949 465 309 56 21 chr15 47734089 47734231 -55760743 - B1_Mur1 SINE Alu 0 149 3 3 949 283 247 49 12 chr15 47735308 47735390 -55759584 + ID_B1 SINE B4 116 200 -24 3 949 308 244 95 82 chr15 47735395 47735542 -55759432 - RMER12 LTR ERVK -8 1314 1166 3 949 7653 57 3 4 chr15 47735550 47736695 -55758279 - L1Md_F2 LINE L1 -15 6567 5425 3 949 2830 65 0 0 chr15 47736981 47737352 -55757622 - L1Md_F2 LINE L1 -463 5420 5050 3 949 297 75 0 0 chr15 47737392 47737432 -55757542 + (TTTC)n Simple_repeat Simple_repeat 3 42 0 3 949 366 154 13 0 chr15 47737442 47737520 -55757454 - L1Md_F2 LINE L1 -2 6580 6502 3 949 1535 81 0 0 chr15 47737527 47737736 -55757238 + L1_Mus1 LINE L1 5840 6048 -519 3 949 241 247 101 25 chr15 47737826 47737905 -55757069 - RMER12 LTR ERVK -85 1237 1153 3 949 3709 203 43 29 chr15 47737940 47738920 -55756054 - RMER12 LTR ERVK -126 1196 1 3 949 27 49 0 0 chr15 47738981 47739022 -55755952 + AT_rich Low_complexity Low_complexity 1 41 0 3 949 21 89 0 0 chr15 47739049 47739105 -55755869 + AT_rich Low_complexity Low_complexity 1 56 0 3 949 536 308 89 12 chr15 47740036 47740218 -55754756 - B3 SINE B2 0 198 2 3 949 539 310 57 17 chr15 47740948 47741125 -55753849 - MER58A DNA MER1_type -1 223 40 3 949 454 258 0 0 chr15 47741130 47741219 -55753755 + PB1 SINE Alu 9 97 -30 3 949 299 380 57 12 chr15 47741406 47741651 -55753323 + RNERVK23-int LTR ERVK 7432 7687 -530 3 949 272 27 0 26 chr15 47741654 47741692 -55753282 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 3 949 1496 88 128 0 chr15 47741861 47742111 -55752863 + RLTR47_MM LTR ERV1 2 283 -249 3 949 294 304 200 92 chr15 47742111 47742491 -55752483 + Lx8 LINE L1 7050 7470 -3 4 949 198 0 0 0 chr15 47742626 47742648 -55752326 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 949 461 283 80 0 chr15 47742659 47742797 -55752177 + B1_Mur2 SINE Alu 1 149 0 4 949 1040 75 0 39 chr15 47743419 47743572 -55751402 + B1_Mus1 SINE Alu 2 148 0 4 949 810 220 50 113 chr15 47744020 47744302 -55750672 - RMER1C Other Other -2 1340 1077 4 949 24 67 0 0 chr15 47744676 47744721 -55750253 + AT_rich Low_complexity Low_complexity 1 45 0 4 949 678 67 19 9 chr15 47746627 47746652 -55748322 + (GAA)n Simple_repeat Simple_repeat 1 26 0 4 949 1077 140 0 0 chr15 47746652 47746830 -55748144 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 4 949 678 67 19 9 chr15 47746830 47746910 -55748064 + (GAA)n Simple_repeat Simple_repeat 3 83 0 4 949 26 64 0 0 chr15 47747634 47747681 -55747293 + AT_rich Low_complexity Low_complexity 1 47 0 4 949 31 68 0 0 chr15 47747722 47747781 -55747193 + AT_rich Low_complexity Low_complexity 1 59 0 4 949 305 158 8 18 chr15 47748596 47748661 -55746313 - B2_Mm2 SINE B2 -102 114 47 4 949 1238 91 17 0 chr15 47748727 47748902 -55746072 - B2_Mm1t SINE B2 -14 179 2 4 949 342 0 0 0 chr15 47749046 47749084 -55745890 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 4 949 1076 110 7 0 chr15 47749084 47749239 -55745735 - B2_Mm1t SINE B2 -37 156 1 4 949 441 288 59 8 chr15 47750217 47750336 -55744638 + RSINE1 SINE B4 41 165 0 4 949 3136 43 13 0 chr15 47752095 47752486 -55742488 + MTA_Mm LTR MaLR 1 396 0 4 949 295 373 18 80 chr15 47752486 47752649 -55742325 - RSINE1 SINE B4 -3 162 10 4 949 260 231 26 0 chr15 47752718 47752796 -55742178 + (TTTG)n Simple_repeat Simple_repeat 3 82 0 4 949 1012 295 16 59 chr15 47752933 47753358 -55741616 + Lx8 LINE L1 7047 7453 -20 4 949 21 71 0 0 chr15 47753374 47753416 -55741558 + AT_rich Low_complexity Low_complexity 1 42 0 4 949 448 327 42 0 chr15 47753686 47753900 -55741074 + L1M2 LINE L1 2572 2794 -3349 4 949 255 197 13 38 chr15 47754027 47754106 -55740868 + L1M2 LINE L1 2793 2869 -3274 4 949 558 279 81 28 chr15 47754165 47754412 -55740562 - L1M2 LINE L1 -520 5780 5521 4 949 22 0 0 0 chr15 47754597 47754619 -55740355 + AT_rich Low_complexity Low_complexity 1 22 0 4 949 229 305 62 38 chr15 47754944 47755155 -55739819 + L1M2 LINE L1 3033 3248 -2892 4 949 21 57 0 0 chr15 47755156 47755191 -55739783 + AT_rich Low_complexity Low_complexity 1 35 0 4 949 22 0 0 0 chr15 47755245 47755267 -55739707 + AT_rich Low_complexity Low_complexity 1 22 0 4 949 23 0 0 0 chr15 47755286 47755309 -55739665 + AT_rich Low_complexity Low_complexity 1 23 0 4 949 412 252 33 24 chr15 47755337 47755473 -55739501 + B1_Mus1 SINE Alu 1 140 -9 4 949 234 200 0 68 chr15 47755432 47755491 -55739483 - MTD LTR MaLR -358 61 7 4 949 21 57 0 0 chr15 47756021 47756056 -55738918 + AT_rich Low_complexity Low_complexity 1 35 0 4 949 264 328 94 60 chr15 47756515 47756781 -55738193 + B4 SINE B4 2 276 -16 4 949 707 83 9 0 chr15 47756845 47756953 -55738021 + (CA)n Simple_repeat Simple_repeat 1 109 0 4 949 2149 86 7 7 chr15 47757046 47757352 -55737622 + L1_Mm LINE L1 5031 5336 -547 4 949 23 33 0 0 chr15 47759140 47759170 -55735804 + AT_rich Low_complexity Low_complexity 1 30 0 4 949 22 56 0 0 chr15 47759808 47759844 -55735130 + AT_rich Low_complexity Low_complexity 1 36 0 4 949 205 0 0 103 chr15 47760659 47760698 -55734276 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 4 949 383 153 0 0 chr15 47760868 47760940 -55734034 - Lx3C LINE L1 -9 6967 6896 4 949 1125 139 24 29 chr15 47760944 47761152 -55733822 + Lx3C LINE L1 5885 6091 -885 4 949 3617 260 85 14 chr15 47761152 47763058 -55731916 + Lx6 LINE L1 5379 7696 0 4 949 371 333 78 44 chr15 47764081 47764285 -55730689 - MTEb LTR MaLR -149 230 20 4 949 318 320 0 19 chr15 47764391 47764496 -55730478 + MLT1A1 LTR MaLR 298 400 -8 4 949 196 264 123 35 chr15 47764762 47764876 -55730098 + L2 LINE L2 2259 2382 -1037 4 949 231 114 0 0 chr15 47766392 47766436 -55728538 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 4 949 3341 72 31 2 chr15 47766464 47766922 -55728052 - L1Md_F2 LINE L1 0 6582 6112 4 949 368 323 179 20 chr15 47766941 47767137 -55727837 - B4A SINE B4 -61 231 5 4 949 306 289 33 131 chr15 47768804 47768987 -55725987 - B2_Mm2 SINE B2 -4 191 27 4 949 23 33 0 0 chr15 47768995 47769025 -55725949 + AT_rich Low_complexity Low_complexity 1 30 0 4 949 182 347 53 0 chr15 47769881 47769956 -55725018 - L2c LINE L2 -39 3348 3270 4 949 420 20 0 0 chr15 47770114 47770163 -55724811 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 949 23 0 0 0 chr15 47770714 47770737 -55724237 + AT_rich Low_complexity Low_complexity 1 23 0 4 949 518 363 37 24 chr15 47771251 47771547 -55723427 + MLT1E1A LTR MaLR 378 677 -3 4 949 306 125 0 0 chr15 47771695 47771743 -55723231 + (CATA)n Simple_repeat Simple_repeat 3 50 0 4 949 189 0 0 0 chr15 47773197 47773218 -55721756 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 4 949 285 311 18 45 chr15 47773546 47773657 -55721317 + PB1D10 SINE Alu 5 112 -5 4 949 266 341 21 62 chr15 47774781 47774975 -55719999 + Lx7 LINE L1 7118 7303 -393 4 949 34 55 0 0 chr15 47775263 47775318 -55719656 + AT_rich Low_complexity Low_complexity 1 55 0 4 949 830 284 5 0 chr15 47775329 47775537 -55719437 - B3 SINE B2 -7 209 1 4 949 553 254 23 17 chr15 47775578 47775750 -55719224 + Lx4B LINE L1 6878 7050 -8 4 949 278 167 0 16 chr15 47777738 47777799 -55717175 + (TAAA)n Simple_repeat Simple_repeat 1 60 0 4 949 22 0 0 0 chr15 47778049 47778071 -55716903 + AT_rich Low_complexity Low_complexity 1 22 0 4 949 281 139 0 0 chr15 47778144 47778187 -55716787 + BGLII LTR ERVK 379 421 0 4 949 234 286 115 64 chr15 47778304 47778461 -55716513 + MIRb SINE MIR 53 217 -51 4 949 240 35 0 0 chr15 47779282 47779311 -55715663 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 949 23 68 0 0 chr15 47781077 47781121 -55713853 + AT_rich Low_complexity Low_complexity 1 44 0 4 949 21 36 0 0 chr15 47781912 47781940 -55713034 + AT_rich Low_complexity Low_complexity 1 28 0 4 949 246 62 0 0 chr15 47782086 47782118 -55712856 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 4 949 3661 157 42 42 chr15 47782235 47782965 -55712009 + Lx3A LINE L1 6234 6963 -18 4 949 23 33 0 0 chr15 47783680 47783710 -55711264 + AT_rich Low_complexity Low_complexity 1 30 0 4 949 197 213 16 32 chr15 47784145 47784208 -55710766 + L3 LINE CR1 3709 3770 -719 4 949 24 0 0 0 chr15 47785482 47785506 -55709468 + AT_rich Low_complexity Low_complexity 1 24 0 4 949 3420 62 4 7 chr15 47785533 47785988 -55708986 - L1Md_F2 LINE L1 0 6582 6129 4 949 3298 106 45 12 chr15 47787676 47788254 -55706720 - L1_Mus2 LINE L1 -600 6381 5761 4 949 27328 108 32 28 chr15 47788251 47793266 -55701708 - L1_Mur1 LINE L1 -438 5448 6 4 949 552 42 0 0 chr15 47793664 47793735 -55701239 + (TC)n Simple_repeat Simple_repeat 2 72 0 4 949 380 97 0 16 chr15 47793735 47793797 -55701177 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 949 350 333 112 43 chr15 47793890 47794078 -55700896 - B4A SINE B4 -87 205 5 4 949 21 57 0 0 chr15 47794174 47794209 -55700765 + AT_rich Low_complexity Low_complexity 1 35 0 4 949 279 0 0 0 chr15 47794275 47794306 -55700668 + (CAA)n Simple_repeat Simple_repeat 1 31 0 4 949 2339 188 28 3 chr15 47794427 47794896 -55700078 - L1_Mur2 LINE L1 -245 5632 5180 4 949 1443 116 47 4 chr15 47795256 47795490 -55699484 - L1Md_F2 LINE L1 -1 6581 6338 4 949 4592 39 4 32 chr15 47795490 47796351 -55698623 - L1Md_F2 LINE L1 -455 6127 5315 4 949 427 330 43 16 chr15 47796538 47796723 -55698251 - B3 SINE B2 0 216 27 4 949 633 354 25 8 chr15 47796792 47797154 -55697820 + ORR1D2 LTR MaLR 3 370 0 4 949 290 342 0 44 chr15 47797475 47797588 -55697386 + PB1D10 SINE Alu 10 117 0 4 949 239 279 42 59 chr15 47798351 47798469 -55696505 + MLT1N2 LTR MaLR 447 562 0 4 949 3081 314 62 28 chr15 47799089 47800710 -55694264 + Lx8 LINE L1 5534 7224 -249 4 949 348 132 58 35 chr15 47800715 47800801 -55694173 + RMER19B LTR ERVK 1 88 -814 4 949 1239 169 80 215 chr15 47800786 47801162 -55693812 - RMER19B LTR ERVK -577 325 1 4 949 1680 234 89 3 chr15 47802362 47802744 -55692230 + MTC LTR MaLR 1 415 -6 4 949 862 297 15 9 chr15 47803361 47803701 -55691273 - Lx9 LINE L1 -1 7643 7302 4 949 401 265 46 13 chr15 47803709 47803862 -55691112 + Lx9 LINE L1 7133 7290 -354 4 949 1343 84 21 0 chr15 47803887 47804077 -55690897 - B2_Mm2 SINE B2 0 195 2 4 949 5369 70 0 1 chr15 47804241 47804939 -55690035 + L1Md_F2 LINE L1 4890 5586 -297 4 949 7507 66 10 3 chr15 47804940 47805924 -55689050 + L1Md_F2 LINE L1 5588 6578 -4 4 949 211 355 22 11 chr15 47806422 47806513 -55688461 - MIRb SINE MIR -9 259 168 4 949 524 283 17 0 chr15 47807236 47807356 -55687618 + B1_Mur1 SINE Alu 6 127 -22 4 949 468 35 0 0 chr15 47807373 47807431 -55687543 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 949 207 0 0 0 chr15 47807492 47807515 -55687459 + (GA)n Simple_repeat Simple_repeat 2 24 0 4 949 305 357 43 43 chr15 47807639 47807800 -55687174 - RSINE1 SINE B4 -1 164 4 4 949 878 92 8 0 chr15 47808720 47808850 -55686124 + (TATATG)n Simple_repeat Simple_repeat 2 132 0 4 949 1159 48 0 7 chr15 47808950 47809098 -55685876 + B1_Mus2 SINE Alu 1 147 0 4 949 249 33 0 0 chr15 47809098 47809128 -55685846 + (A)n Simple_repeat Simple_repeat 1 30 0 4 949 348 349 23 0 chr15 47810032 47810161 -55684813 + RSINE1 SINE B4 6 137 -28 4 949 3842 24 0 0 chr15 47810308 47810762 -55684212 - L1_Mm LINE L1 -2005 3878 3425 5 949 4036 2 0 0 chr15 47810762 47811213 -55683761 + L1Md_T LINE L1 6132 6582 0 5 949 1868 200 66 71 chr15 47811295 47811859 -55683115 + RLTR31_Mm LTR ERVK 1 561 0 5 949 503 278 116 26 chr15 47812122 47812355 -55682619 + MLT1B LTR MaLR 3 256 -134 5 949 369 161 0 0 chr15 47812370 47812457 -55682517 + (CAGAGA)n Simple_repeat Simple_repeat 4 90 0 5 949 235 337 0 12 chr15 47812536 47812620 -55682354 + MLT1B LTR MaLR 343 425 -42 5 949 560 240 59 86 chr15 47812642 47812847 -55682127 + RCHARR1 DNA MER1_type 712 913 -61 5 949 597 94 0 0 chr15 47812847 47812932 -55682042 + (TG)n Simple_repeat Simple_repeat 2 86 0 5 949 560 240 59 86 chr15 47812932 47812981 -55681993 + RCHARR1 DNA MER1_type 914 959 -15 5 949 408 56 42 0 chr15 47813609 47813681 -55681293 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 949 180 111 0 0 chr15 47813681 47813708 -55681266 + (TATG)n Simple_repeat Simple_repeat 4 30 0 5 949 837 195 56 33 chr15 47813817 47813997 -55680977 - ORR1D1 LTR MaLR -2 372 189 5 949 243 0 0 0 chr15 47814013 47814040 -55680934 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 949 663 78 0 0 chr15 47814213 47814303 -55680671 + (TA)n Simple_repeat Simple_repeat 1 90 0 5 949 365 182 68 19 chr15 47814317 47814479 -55680495 + (TCTA)n Simple_repeat Simple_repeat 4 173 0 5 949 542 115 21 0 chr15 47814485 47814581 -55680393 + (TCCA)n Simple_repeat Simple_repeat 4 101 0 5 949 1122 68 0 0 chr15 47814582 47814730 -55680244 + (TCTA)n Simple_repeat Simple_repeat 1 148 0 5 949 273 296 44 0 chr15 47814754 47814836 -55680138 - B1F SINE Alu -7 113 28 5 949 1178 213 65 102 chr15 47815211 47815593 -55679381 + ORR1D1 LTR MaLR 5 372 -2 5 949 212 367 61 52 chr15 47816263 47816378 -55678596 - B1F1 SINE Alu -33 116 1 5 949 497 384 15 15 chr15 47818023 47818229 -55676745 + ID_B1 SINE B4 4 209 -15 5 949 201 163 0 0 chr15 47818239 47818288 -55676686 + GA-rich Low_complexity Low_complexity 1 49 0 5 949 1756 192 70 29 chr15 47819108 47819241 -55675733 + MTC LTR MaLR 18 147 -274 5 949 1543 229 16 219 chr15 47819241 47820008 -55674966 + RMER19C LTR ERVK 1 611 0 5 949 1756 192 70 29 chr15 47820008 47820259 -55674715 + MTC LTR MaLR 148 418 -3 5 949 591 271 47 78 chr15 47820522 47820714 -55674260 - B3A SINE B2 -5 193 8 5 949 486 0 0 0 chr15 47820806 47820860 -55674114 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 949 679 302 40 37 chr15 47821300 47821625 -55673349 + ORR1E LTR MaLR 1 366 -13 5 949 1958 190 92 0 chr15 47823453 47823879 -55671095 - L1_Mur2 LINE L1 -148 5729 5265 5 949 669 178 19 13 chr15 47823880 47824039 -55670935 + RLTR31_Mur LTR ERVK 1 160 -393 5 949 1077 123 0 0 chr15 47824159 47824329 -55670645 + (TTTC)n Simple_repeat Simple_repeat 4 173 0 5 949 205 51 51 0 chr15 47824329 47824367 -55670607 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 5 949 1099 56 7 14 chr15 47824367 47824512 -55670462 - B1_Mus2 SINE Alu -3 144 1 5 949 1266 248 108 13 chr15 47825717 47826097 -55668877 - MTD LTR MaLR 0 419 4 5 949 288 53 0 0 chr15 47828204 47828242 -55666732 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 5 949 21 57 0 0 chr15 47829929 47829964 -55665010 + AT_rich Low_complexity Low_complexity 1 35 0 5 949 23 0 0 0 chr15 47830064 47830087 -55664887 + AT_rich Low_complexity Low_complexity 1 23 0 5 949 1076 0 0 0 chr15 47831467 47831600 -55663374 - L1Md_T LINE L1 0 6582 6450 5 949 306 0 0 0 chr15 47832013 47832047 -55662927 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 949 294 297 0 0 chr15 47832059 47832123 -55662851 - B1F2 SINE Alu -82 67 4 5 949 517 333 7 0 chr15 47832123 47832210 -55662764 - B4 SINE B4 -204 88 1 5 949 24 53 0 0 chr15 47832487 47832525 -55662449 + AT_rich Low_complexity Low_complexity 1 38 0 5 949 22 0 0 0 chr15 47832782 47832804 -55662170 + AT_rich Low_complexity Low_complexity 1 22 0 5 949 28 29 0 0 chr15 47833420 47833455 -55661519 + AT_rich Low_complexity Low_complexity 1 35 0 5 949 588 167 0 0 chr15 47833635 47833743 -55661231 + Lx2 LINE L1 6889 6996 -1 5 949 32 0 0 0 chr15 47834511 47834543 -55660431 + AT_rich Low_complexity Low_complexity 1 32 0 5 949 997 50 14 7 chr15 47835923 47836065 -55658909 + L1Md_F3 LINE L1 6441 6583 -1 5 949 522 255 14 7 chr15 47836817 47836963 -55658011 + ORR1A4 LTR MaLR 77 223 -106 5 949 1127 82 103 17 chr15 47836985 47837159 -55657815 - B2_Mm2 SINE B2 -4 191 3 5 949 825 111 24 0 chr15 47837161 47837287 -55657687 + ORR1A4 LTR MaLR 201 329 0 5 949 497 135 11 0 chr15 47837941 47838030 -55656944 + (TC)n Simple_repeat Simple_repeat 1 90 0 5 949 222 191 15 60 chr15 47838070 47838137 -55656837 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 5 949 217 386 78 10 chr15 47838138 47838240 -55656734 - PB1D10 SINE Alu -8 109 1 5 949 21 36 0 0 chr15 47838345 47838373 -55656601 + AT_rich Low_complexity Low_complexity 1 28 0 5 949 1040 109 0 0 chr15 47838706 47838853 -55656121 - B1_Mus1 SINE Alu 0 148 2 5 949 1242 221 97 60 chr15 47838884 47839254 -55655720 + ORR1C2 LTR MaLR 1 384 0 5 949 28 48 0 0 chr15 47839273 47839315 -55655659 + AT_rich Low_complexity Low_complexity 1 42 0 5 949 288 0 0 0 chr15 47839605 47839637 -55655337 + (T)n Simple_repeat Simple_repeat 1 32 0 5 949 237 326 0 36 chr15 47839749 47839886 -55655088 - Lx8 LINE L1 -2 7471 7340 5 949 214 139 47 0 chr15 47839888 47839931 -55655043 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 5 949 1086 314 28 6 chr15 47839935 47840262 -55654712 - Lx8 LINE L1 -122 7351 7018 5 949 395 221 141 47 chr15 47841002 47841098 -55653876 + B1F1 SINE Alu 10 116 -33 5 118 2943 78 5 12 chr15 47841098 47841501 -55653473 + MTB LTR MaLR 1 400 0 5 950 395 221 141 47 chr15 47841501 47841532 -55653442 + B1F1 SINE Alu 117 149 0 5 950 261 293 40 0 chr15 47841650 47841725 -55653249 + ID SINE ID 2 79 -145 5 950 547 324 43 32 chr15 47843226 47843411 -55651563 + B3 SINE B2 25 211 -5 5 950 23 0 0 0 chr15 47843444 47843467 -55651507 + AT_rich Low_complexity Low_complexity 1 23 0 5 950 2302 143 98 2 chr15 47843473 47843881 -55651093 + Lx3C LINE L1 6528 6974 -2 5 950 217 25 100 0 chr15 47843887 47843927 -55651047 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 5 950 5473 116 57 10 chr15 47844187 47845049 -55649925 - L1_Mus4 LINE L1 -5 6631 5730 5 950 3009 127 24 0 chr15 47845055 47845520 -55649454 + L1_Mus4 LINE L1 5266 5741 -142 5 950 317 272 75 79 chr15 47845961 47845972 -55649002 + B1F1 SINE Alu 10 58 -91 5 950 340 318 27 36 chr15 47845972 47846083 -55648891 + ID_B1 SINE B4 96 205 -19 5 950 317 272 75 79 chr15 47846083 47846099 -55648875 + B1F1 SINE Alu 59 145 -4 5 950 1178 311 113 49 chr15 47846715 47847468 -55647506 - Lx8 LINE L1 -206 7267 6467 5 950 320 0 0 24 chr15 47847468 47847509 -55647465 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 5 950 1132 79 0 7 chr15 47847509 47847662 -55647312 - B2_Mm2 SINE B2 -43 152 1 5 950 204 245 31 6 chr15 47848666 47848826 -55646148 + (TA)n Simple_repeat Simple_repeat 1 164 0 5 950 280 244 37 12 chr15 47849541 47849641 -55645333 - MTD LTR MaLR -20 399 278 5 950 1044 297 122 11 chr15 47849665 47850019 -55644955 - MTD LTR MaLR -14 405 13 5 950 283 250 0 14 chr15 47850012 47850081 -55644893 - MTD LTR MaLR -299 120 53 5 950 733 21 21 0 chr15 47850506 47850601 -55644373 + (GA)n Simple_repeat Simple_repeat 2 98 0 5 950 198 286 57 0 chr15 47851078 47851148 -55643826 - L3b LINE CR1 -83 399 326 5 950 202 114 0 28 chr15 47851168 47851204 -55643770 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 950 7122 84 4 40 chr15 47851253 47852649 -55642325 - L1Md_F2 LINE L1 -2 6580 5221 5 950 5322 112 1 12 chr15 47852642 47854062 -55640912 - L1Md_F2 LINE L1 -4100 1783 380 5 950 4822 138 57 0 chr15 47854303 47855095 -55639879 - Lx2 LINE L1 0 6997 6161 5 950 1531 143 109 4 chr15 47855095 47855369 -55639605 + Lx2 LINE L1 6532 6834 -163 5 950 1251 150 17 0 chr15 47855353 47855587 -55639387 - Lx2 LINE L1 -828 6169 5932 5 950 2408 103 6 3 chr15 47855601 47855953 -55639021 + Lx2 LINE L1 5587 5939 -1058 5 950 279 269 82 7 chr15 47856035 47856181 -55638793 + L1MA6 LINE L1 6144 6300 0 5 950 440 324 95 30 chr15 47856967 47857231 -55637743 + MER34A LTR ERV1 22 302 -269 5 950 396 0 0 0 chr15 47858134 47858178 -55636796 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 5 950 3948 108 15 10 chr15 47858181 47858769 -55636205 - Lx LINE L1 -12 6642 6052 5 950 216 0 0 0 chr15 47858779 47858803 -55636171 + (T)n Simple_repeat Simple_repeat 1 24 0 5 950 706 198 6 6 chr15 47858843 47859006 -55635968 + CT-rich Low_complexity Low_complexity 2 164 0 5 950 207 222 33 22 chr15 47859052 47859144 -55635830 + (TAAA)n Simple_repeat Simple_repeat 2 94 0 5 950 3953 176 72 13 chr15 47860282 47861029 -55633945 - Lx5 LINE L1 -10 7040 6250 5 950 242 107 357 0 chr15 47861021 47861077 -55633897 - Lx3C LINE L1 -232 6744 6669 5 950 408 338 117 61 chr15 47861077 47861236 -55633738 - B4 SINE B4 -45 247 87 5 950 225 62 62 0 chr15 47861236 47861284 -55633690 + (TTG)n Simple_repeat Simple_repeat 2 52 0 5 950 408 341 81 16 chr15 47861284 47861354 -55633620 - B4 SINE B4 -206 86 6 5 950 847 289 54 11 chr15 47861526 47861802 -55633172 - Lx6 LINE L1 0 7460 7173 5 950 307 302 0 54 chr15 47861999 47862111 -55632863 + PB1D10 SINE Alu 12 117 0 5 950 360 330 53 41 chr15 47862633 47862876 -55632098 + MER67C LTR ERV1 50 295 -416 5 950 1060 94 0 0 chr15 47862898 47863036 -55631938 + B1_Mus2 SINE Alu 2 139 -8 5 950 25 0 0 0 chr15 47863049 47863074 -55631900 + AT_rich Low_complexity Low_complexity 1 25 0 5 950 26 30 0 0 chr15 47863196 47863229 -55631745 + AT_rich Low_complexity Low_complexity 1 33 0 5 950 31252 84 6 12 chr15 47863281 47868301 -55626673 + L1Md_Gf LINE L1 220 5589 -297 5 950 7628 67 8 3 chr15 47868301 47869290 -55625684 + L1Md_F2 LINE L1 5587 6580 -2 5 950 807 96 0 88 chr15 47869488 47869682 -55625292 + (TAGA)n Simple_repeat Simple_repeat 4 180 0 5 950 5954 181 24 73 chr15 47869888 47871588 -55623386 + Lx3C LINE L1 5340 6974 -2 5 950 347 307 26 17 chr15 47873098 47873214 -55621760 + MLT1L LTR MaLR 111 227 -383 5 950 518 241 0 18 chr15 47875524 47875634 -55619340 - B1_Mur4 SINE Alu -9 141 34 5 950 1281 93 44 0 chr15 47875842 47876025 -55618949 - B2_Mm2 SINE B2 -3 192 2 6 950 24 0 0 0 chr15 47877063 47877087 -55617887 + AT_rich Low_complexity Low_complexity 1 24 0 6 950 306 0 0 0 chr15 47877203 47877237 -55617737 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 950 713 108 19 39 chr15 47877237 47877391 -55617583 + GA-rich Low_complexity Low_complexity 4 154 0 6 950 306 300 91 0 chr15 47877400 47877510 -55617464 - MLT1A0 LTR MaLR -245 120 1 6 950 23 33 0 0 chr15 47877617 47877647 -55617327 + AT_rich Low_complexity Low_complexity 1 30 0 6 950 1944 188 19 19 chr15 47878278 47878691 -55616283 + RLTR31_Mm LTR ERVK 1 413 -148 6 950 245 273 0 29 chr15 47878706 47878774 -55616200 + RLTR31_Mm LTR ERVK 496 561 0 6 950 276 30 0 0 chr15 47879131 47879164 -55615810 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 950 7128 151 47 11 chr15 47879285 47881393 -55613581 + Lx4A LINE L1 4852 7058 0 6 950 226 360 100 27 chr15 47882261 47882481 -55612493 - L2a LINE L2 -98 3328 3093 6 950 286 323 116 29 chr15 47882595 47882802 -55612172 - L2a LINE L2 -666 2753 2529 6 950 997 176 18 18 chr15 47884404 47884630 -55610344 - L1_Mur2 LINE L1 -1878 3999 3774 6 950 947 261 0 0 chr15 47884628 47884823 -55610151 + Lx5 LINE L1 6611 6805 -245 6 950 4559 101 14 45 chr15 47884855 47885236 -55609738 - Lx3_Mus LINE L1 -1 7008 6649 6 950 1240 93 0 27 chr15 47885236 47885424 -55609550 - B2_Mm2 SINE B2 -11 184 2 6 950 4559 101 14 45 chr15 47885424 47885746 -55609228 - Lx3_Mus LINE L1 -361 6648 6327 6 950 4806 118 9 20 chr15 47885746 47886599 -55608375 + Lx3_Mus LINE L1 5482 6322 -687 6 950 1190 68 0 0 chr15 47887015 47887163 -55607811 + B1_Mus1 SINE Alu 1 148 0 6 950 246 330 21 11 chr15 47887291 47887386 -55607588 + Lx8 LINE L1 6666 6761 -712 6 950 258 309 7 67 chr15 47887388 47887523 -55607451 + Lx9 LINE L1 6962 7088 -556 6 950 30793 91 17 5 chr15 47887563 47892704 -55602270 + L1Md_F2 LINE L1 382 5587 -296 6 950 6954 95 2 7 chr15 47892705 47893692 -55601282 + L1Md_F2 LINE L1 5589 6570 -12 6 950 637 308 27 52 chr15 47893692 47894059 -55600915 + Lx9 LINE L1 7136 7493 -151 6 950 303 71 0 0 chr15 47894100 47894142 -55600832 + (GA)n Simple_repeat Simple_repeat 1 42 0 6 950 611 228 22 7 chr15 47894323 47894460 -55600514 + B1_Mus1 SINE Alu 10 148 0 6 950 21 36 0 0 chr15 47895120 47895148 -55599826 + AT_rich Low_complexity Low_complexity 1 28 0 6 950 355 0 60 0 chr15 47895649 47895699 -55599275 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 6 950 22 0 0 0 chr15 47896198 47896220 -55598754 + AT_rich Low_complexity Low_complexity 1 22 0 6 950 414 0 0 0 chr15 47897074 47897120 -55597854 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 950 367 331 61 30 chr15 47897709 47897874 -55597100 + B4A SINE B4 2 171 -121 6 950 22 35 0 0 chr15 47898030 47898059 -55596915 + AT_rich Low_complexity Low_complexity 1 29 0 6 950 1646 249 68 23 chr15 47898183 47898910 -55596064 + Lx7 LINE L1 5413 6190 -1506 6 950 306 0 0 0 chr15 47898910 47898944 -55596030 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 950 1646 263 92 38 chr15 47898944 47899087 -55595887 + Lx7 LINE L1 6191 6329 -1367 6 950 4461 61 16 0 chr15 47899135 47899707 -55595267 + L1Md_F3 LINE L1 5990 6570 -14 6 950 2164 245 6 14 chr15 47899738 47900238 -55594736 + Lx6 LINE L1 6312 6807 -653 6 950 770 358 68 15 chr15 47900261 47900655 -55594319 + Lx8 LINE L1 6599 7013 -460 6 950 489 185 35 0 chr15 47900697 47900870 -55594104 + (TA)n Simple_repeat Simple_repeat 2 180 0 6 950 321 302 207 0 chr15 47902145 47902219 -55592755 - B1F SINE Alu -1 148 55 6 950 2372 45 41 16 chr15 47902219 47902538 -55592436 - L1Md_F3 LINE L1 -14 6570 6244 6 950 321 302 207 0 chr15 47902538 47902579 -55592395 - B1F SINE Alu -95 54 10 6 950 291 340 21 0 chr15 47903609 47903703 -55591271 + MER94 DNA AcHobo 39 134 0 6 950 23 54 0 0 chr15 47904820 47904857 -55590117 + AT_rich Low_complexity Low_complexity 1 37 0 6 950 5393 56 9 0 chr15 47905228 47905908 -55589066 - L1Md_F2 LINE L1 -1 6581 5896 6 950 442 260 38 9 chr15 47906301 47906406 -55588568 - B1F1 SINE Alu -34 115 8 6 950 1648 127 0 0 chr15 47907214 47907451 -55587523 - L1_Mus4 LINE L1 -83 6553 6317 6 950 895 318 84 3 chr15 47908001 47908357 -55586617 - MTD LTR MaLR 0 419 35 6 950 562 234 49 71 chr15 47908335 47908360 -55586614 + CYRA11_Mm Unknown Y-chromosome 148 206 -411 6 950 954 110 0 0 chr15 47908360 47908496 -55586478 - URR1B DNA MER1_type -1 224 89 6 950 562 234 49 71 chr15 47908496 47908560 -55586414 + CYRA11_Mm Unknown Y-chromosome 207 367 -250 6 950 201 74 0 0 chr15 47908585 47908612 -55586362 + (TAAG)n Simple_repeat Simple_repeat 1 27 0 6 950 2659 110 2 2 chr15 47908796 47909198 -55585776 - L1_Mus4 LINE L1 -1 6635 6234 6 950 2313 50 43 0 chr15 47909198 47909497 -55585477 + L1_Mus4 LINE L1 5911 6222 -414 6 950 318 287 22 2 chr15 47910154 47910295 -55584679 + L1MB1 LINE L1 5851 5993 -190 6 950 280 328 64 21 chr15 47910589 47910729 -55584245 - MLT1A0 LTR MaLR -79 286 141 6 950 1324 202 205 57 chr15 47910934 47911311 -55583663 + RLTR20C LTR ERVK 1 443 -91 6 950 354 80 0 0 chr15 47911311 47911361 -55583613 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 950 1324 243 175 46 chr15 47911361 47911437 -55583537 + RLTR20C LTR ERVK 444 577 -1 6 950 2781 127 67 19 chr15 47911592 47912067 -55582907 + Lx3A LINE L1 6479 6976 -5 6 950 3112 189 28 5 chr15 47912903 47913205 -55581769 + Lx2 LINE L1 4632 4945 -932 6 950 1545 88 5 0 chr15 47913205 47913420 -55581554 - L1_Mus1 LINE L1 -1 6566 6351 6 950 3112 189 28 5 chr15 47913420 47913765 -55581209 + Lx2 LINE L1 4946 5294 -583 6 950 2481 51 0 0 chr15 47913762 47914075 -55580899 - L1Md_F2 LINE L1 -1370 4513 4201 6 950 8250 65 2 1 chr15 47914074 47915139 -55579835 + L1Md_F2 LINE L1 4521 5586 -297 6 950 7674 50 23 2 chr15 47915139 47916104 -55578870 + L1Md_F2 LINE L1 5587 6571 -11 6 950 7781 128 77 13 chr15 47916111 47917697 -55577277 + Lx2 LINE L1 5302 6997 0 6 950 979 157 33 27 chr15 47917803 47917843 -55577131 - B2_Mm2 SINE B2 -11 184 148 6 950 243 0 0 0 chr15 47917843 47917870 -55577104 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 950 979 157 33 27 chr15 47917870 47918012 -55576962 - B2_Mm2 SINE B2 -48 147 1 6 950 515 246 114 0 chr15 47918048 47918162 -55576812 - B3 SINE B2 -86 130 4 6 950 182 321 0 0 chr15 47918226 47918279 -55576695 - L2 LINE L2 -1390 2029 1977 6 950 495 0 0 0 chr15 47919341 47919396 -55575578 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 950 387 0 0 0 chr15 47919396 47919438 -55575536 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 950 329 179 12 0 chr15 47920049 47920133 -55574841 + GA-rich Low_complexity Low_complexity 2 86 0 6 950 687 0 19 37 chr15 47920134 47920241 -55574733 + (GAGAA)n Simple_repeat Simple_repeat 5 109 0 6 950 642 273 57 42 chr15 47921556 47921889 -55573085 - RLTR15 LTR ERVK -21 338 1 6 950 307 336 53 46 chr15 47921889 47922006 -55572968 - B1F2 SINE Alu -31 118 1 6 950 419 298 21 0 chr15 47921915 47922009 -55572965 - B4 SINE B4 -114 178 83 6 950 371 267 36 48 chr15 47922010 47922262 -55572712 - Lx9 LINE L1 -2 7642 7394 6 950 1087 127 15 20 chr15 47922312 47922513 -55572461 - Lx3_Mus LINE L1 -8 7001 6802 6 950 263 300 57 48 chr15 47922574 47922679 -55572295 - RSINE1 SINE B4 -33 132 27 6 950 199 79 53 0 chr15 47923758 47923796 -55571178 + (CTAAT)n Simple_repeat Simple_repeat 1 40 0 6 950 199 104 42 0 chr15 47924762 47924810 -55570164 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 950 604 312 31 40 chr15 47924926 47925150 -55569824 + B4 SINE B4 2 223 -69 6 950 534 31 0 0 chr15 47925202 47925266 -55569708 + (CA)n Simple_repeat Simple_repeat 1 64 0 6 950 392 328 36 14 chr15 47926074 47926213 -55568761 + ID_B1 SINE B4 73 214 -10 6 950 6070 139 51 2 chr15 47927142 47928162 -55566812 + Lx3B LINE L1 5880 6949 -24 6 950 306 0 0 0 chr15 47929073 47929107 -55565867 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 6 950 243 0 0 0 chr15 47930217 47930244 -55564730 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 6 950 510 304 124 11 chr15 47930293 47930479 -55564495 + B3 SINE B2 9 215 -1 6 950 224 315 11 22 chr15 47930551 47930642 -55564332 + (TATG)n Simple_repeat Simple_repeat 2 91 0 6 950 223 350 0 59 chr15 47930647 47930732 -55564242 - RSINE1 SINE B4 0 165 86 6 950 224 245 0 0 chr15 47931082 47931135 -55563839 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 6 950 298 307 32 54 chr15 47931160 47931253 -55563721 - PB1D9 SINE Alu -24 96 6 6 950 239 302 180 12 chr15 47931909 47932070 -55562904 - MIR SINE MIR 0 262 75 6 950 1082 101 0 7 chr15 47932506 47932655 -55562319 + B1_Mus1 SINE Alu 1 148 0 6 950 308 60 59 15 chr15 47932657 47932725 -55562249 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 6 950 189 107 0 0 chr15 47934732 47934760 -55560214 + (A)n Simple_repeat Simple_repeat 1 28 0 6 950 394 316 93 15 chr15 47935032 47935302 -55559672 + L1MA8 LINE L1 5948 6238 -53 6 950 21 36 0 0 chr15 47935328 47935356 -55559618 + AT_rich Low_complexity Low_complexity 1 28 0 6 950 504 0 0 0 chr15 47936098 47936154 -55558820 + (TC)n Simple_repeat Simple_repeat 1 56 0 6 950 841 286 32 25 chr15 47936154 47936487 -55558487 - Lx7 LINE L1 -84 7389 7040 6 950 4726 128 16 19 chr15 47936583 47937376 -55557598 - Lx LINE L1 -1 6653 5863 6 950 1163 41 7 0 chr15 47937527 47937672 -55557302 + B1_Mus2 SINE Alu 2 147 0 6 950 252 100 0 0 chr15 47937672 47937712 -55557262 + (A)n Simple_repeat Simple_repeat 1 40 0 6 950 458 300 36 62 chr15 47937712 47937911 -55557063 - Lx6 LINE L1 -330 7130 6954 6 950 360 0 0 0 chr15 47938556 47938596 -55556378 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 950 477 242 0 0 chr15 47939272 47939484 -55555490 + (CA)n Simple_repeat Simple_repeat 1 212 0 6 950 314 310 0 42 chr15 47939484 47939512 -55555462 + (CATATA)n Simple_repeat Simple_repeat 4 29 0 6 950 283 254 123 37 chr15 47939994 47940148 -55554826 + MIR SINE MIR 27 199 -69 6 950 457 345 25 25 chr15 47940581 47940822 -55554152 + MIRb SINE MIR 27 267 -1 6 950 183 80 0 0 chr15 47941535 47941560 -55553414 + (TTG)n Simple_repeat Simple_repeat 3 27 0 6 950 1039 237 26 11 chr15 47941744 47942009 -55552965 + Lx2B LINE L1 6730 6998 -2 6 950 28 61 0 0 chr15 47942032 47942081 -55552893 + AT_rich Low_complexity Low_complexity 1 49 0 6 950 191 240 99 74 chr15 47942287 47942368 -55552606 + L2 LINE L2 2382 2464 -955 6 950 502 324 0 26 chr15 47942626 47942778 -55552196 + B1_Mur1 SINE Alu 1 148 -1 7 950 423 165 0 0 chr15 47942892 47942977 -55551997 + (CATA)n Simple_repeat Simple_repeat 4 88 0 7 950 2601 160 160 15 chr15 47942978 47943573 -55551401 + RMER6C LTR ERVK 9 689 -1 7 950 22 35 0 0 chr15 47944301 47944330 -55550644 + AT_rich Low_complexity Low_complexity 1 29 0 7 950 240 278 289 0 chr15 47944629 47944719 -55550255 + RSINE1 SINE B4 13 128 -37 7 950 24 32 0 0 chr15 47944740 47944771 -55550203 + AT_rich Low_complexity Low_complexity 1 31 0 7 950 246 296 79 36 chr15 47944833 47944973 -55550001 + RMER12 LTR ERVK 696 841 -481 7 950 31 0 0 0 chr15 47944977 47945008 -55549966 + AT_rich Low_complexity Low_complexity 1 31 0 7 950 447 324 128 25 chr15 47945605 47945925 -55549049 + L1MC4 LINE L1 865 1217 -4998 7 950 21 71 0 0 chr15 47947101 47947143 -55547831 + AT_rich Low_complexity Low_complexity 1 42 0 7 950 1918 133 117 16 chr15 47947421 47947789 -55547185 - Lx LINE L1 0 6654 6250 7 950 25 0 0 0 chr15 47947830 47947855 -55547119 + AT_rich Low_complexity Low_complexity 1 25 0 7 950 1918 178 85 22 chr15 47948959 47949407 -55545567 - RMER6C LTR ERVK 0 690 215 7 950 1290 139 14 125 chr15 47949414 47949710 -55545264 + Lx LINE L1 6391 6653 -1 7 950 842 174 19 25 chr15 47949711 47949870 -55545104 - RMER6C LTR ERVK -531 159 2 7 950 441 0 0 0 chr15 47950209 47950258 -55544716 + (TA)n Simple_repeat Simple_repeat 2 50 0 7 950 968 304 162 26 chr15 47950857 47951667 -55543307 - L1MC1 LINE L1 -22 6311 5392 7 950 4032 77 11 4 chr15 47951692 47952238 -55542736 - L1_Mus2 LINE L1 0 6566 6017 7 950 1272 57 17 6 chr15 47952238 47952401 -55542573 + L1_Mus1 LINE L1 5649 5811 -756 7 950 1086 58 0 0 chr15 47952401 47952538 -55542436 - B1_Mm SINE Alu -10 137 1 7 950 1272 57 17 6 chr15 47952538 47952549 -55542425 + L1_Mus1 LINE L1 5812 5825 -742 7 950 22 80 0 0 chr15 47952758 47952808 -55542166 + AT_rich Low_complexity Low_complexity 1 50 0 7 950 966 303 122 6 chr15 47953337 47953672 -55541302 + ORR1D1 LTR MaLR 1 374 0 7 950 1079 108 0 0 chr15 47953818 47953966 -55541008 - B1_Mus1 SINE Alu 0 148 1 7 950 303 143 23 23 chr15 47954177 47954263 -55540711 - Lx3_Mus LINE L1 -8 7001 6916 7 950 26325 20 0 0 chr15 47955127 47958213 -55536761 + L1Md_T LINE L1 2500 5586 -297 7 950 8300 37 0 0 chr15 47958213 47959208 -55535766 + L1Md_T LINE L1 5587 6581 -1 7 950 345 292 0 0 chr15 47959554 47959643 -55535331 + PB1D10 SINE Alu 27 115 -2 7 950 5352 103 61 10 chr15 47959770 47961348 -55533626 - L1VL2 LINE L1 -1770 1845 179 7 950 351 0 0 0 chr15 47961371 47961410 -55533564 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 950 1358 367 105 12 chr15 47961493 47962494 -55532480 + Lx8 LINE L1 6231 7324 -149 7 950 26 50 0 0 chr15 47963434 47963474 -55531500 + AT_rich Low_complexity Low_complexity 1 40 0 7 950 218 265 56 42 chr15 47963920 47963991 -55530983 + MIRm SINE MIR 172 243 -33 7 950 184 30 61 0 chr15 47964776 47964809 -55530165 + (TA)n Simple_repeat Simple_repeat 2 36 0 7 950 1482 113 5 13 chr15 47964809 47965033 -55529941 - L1_Mus2 LINE L1 -2 6564 6343 7 950 21 36 0 0 chr15 47965033 47965061 -55529913 + AT_rich Low_complexity Low_complexity 1 28 0 7 950 58 60 0 0 chr15 47966172 47966272 -55528702 + AT_rich Low_complexity Low_complexity 1 100 0 7 950 290 115 19 0 chr15 47966282 47966334 -55528640 + (TATAA)n Simple_repeat Simple_repeat 3 55 0 7 950 243 152 0 0 chr15 47967004 47967050 -55527924 - Lx3A LINE L1 -5 6976 6931 7 950 207 0 0 0 chr15 47967116 47967139 -55527835 + (A)n Simple_repeat Simple_repeat 1 23 0 7 950 369 182 34 27 chr15 47967467 47967614 -55527360 - Lx9 LINE L1 -7 7637 7490 7 950 758 49 0 19 chr15 47967677 47967781 -55527193 + (TTTC)n Simple_repeat Simple_repeat 2 103 0 7 950 574 231 8 16 chr15 47967781 47967893 -55527081 - B1_Mur4 SINE Alu -11 139 27 7 950 229 318 0 0 chr15 47968046 47968109 -55526865 + MTEa LTR MaLR 224 286 -93 7 950 470 295 57 8 chr15 47968090 47968273 -55526701 + MTEb LTR MaLR 165 379 0 7 950 26 30 0 0 chr15 47969076 47969109 -55525865 + AT_rich Low_complexity Low_complexity 1 33 0 7 950 530 350 30 53 chr15 47970698 47970997 -55523977 + B4A SINE B4 1 292 0 7 950 1804 241 104 8 chr15 47971446 47971935 -55523039 + Lx7 LINE L1 6741 7276 -420 7 951 212 321 0 18 chr15 47972590 47972647 -55522327 - ID4_ SINE ID -19 64 9 7 951 5539 170 89 7 chr15 47972881 47973930 -55521044 + Lx2 LINE L1 5862 6996 -1 7 951 23 33 0 0 chr15 47973939 47973969 -55521005 + AT_rich Low_complexity Low_complexity 1 30 0 7 951 2252 213 55 15 chr15 47974218 47974766 -55520208 - L1_Mur2 LINE L1 -1543 4334 3765 7 951 1862 312 38 3 chr15 47974760 47975480 -55519494 + Lx5 LINE L1 6430 7038 -12 7 951 333 151 23 11 chr15 47975481 47975568 -55519406 + GA-rich Low_complexity Low_complexity 2 89 0 7 951 199 320 77 0 chr15 47976752 47976830 -55518144 + MIR SINE MIR 114 197 -65 7 951 387 73 0 0 chr15 47977295 47977350 -55517624 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 951 1611 198 55 29 chr15 47977435 47977819 -55517155 + ORR1B1 LTR MaLR 1 394 0 7 951 234 0 0 0 chr15 47978164 47978190 -55516784 + (TC)n Simple_repeat Simple_repeat 1 26 0 7 951 923 338 84 13 chr15 47978270 47978804 -55516170 - Lx8 LINE L1 -699 6774 6203 7 951 818 336 29 80 chr15 47978802 47979316 -55515658 + Lx8 LINE L1 6805 7292 -181 7 951 4356 263 47 9 chr15 47979311 47980398 -55514576 + Lx6 LINE L1 6326 7453 -7 7 951 331 111 48 0 chr15 47980958 47981021 -55513953 + L1Md_F3 LINE L1 6512 6577 -7 7 951 1772 185 92 33 chr15 47983726 47984117 -55510857 + MTC LTR MaLR 6 419 -2 7 951 11695 129 20 19 chr15 47984852 47986813 -55508161 + L1_Mm LINE L1 2192 4154 -1729 7 951 3228 50 2 0 chr15 47989119 47989523 -55505451 + L1_Mus1 LINE L1 6163 6567 0 7 951 462 101 0 0 chr15 47989805 47989874 -55505100 + (TC)n Simple_repeat Simple_repeat 1 69 0 7 951 358 291 6 42 chr15 47989957 47990122 -55504852 + (TATATG)n Simple_repeat Simple_repeat 2 160 0 7 951 298 306 29 0 chr15 47990051 47990221 -55504753 + (TA)n Simple_repeat Simple_repeat 1 175 0 7 951 2482 298 30 69 chr15 47990249 47991354 -55503620 + Lx9 LINE L1 6364 7425 -219 7 951 261 273 25 38 chr15 47992237 47992317 -55502657 + Lx6 LINE L1 7071 7149 -311 7 951 644 216 21 21 chr15 47992368 47992510 -55502464 - B1_Mus1 SINE Alu -6 142 1 7 951 351 310 18 0 chr15 47993632 47993745 -55501229 + ORR1D2 LTR MaLR 8 122 -248 7 951 339 322 8 17 chr15 47994135 47994252 -55500722 + MLT1E LTR MaLR 117 232 -421 7 951 599 269 57 11 chr15 47994618 47994795 -55500179 - MTE2b LTR MaLR -2 377 193 7 951 290 211 18 0 chr15 47994800 47994857 -55500117 - MTE2b LTR MaLR -314 65 8 7 951 5143 104 43 0 chr15 47996361 47997132 -55497842 - Lx3_Mus LINE L1 -5 7004 6201 7 951 1120 236 106 55 chr15 47997157 47997610 -55497364 + RLTR20D LTR ERVK 6 481 -87 7 951 2882 114 12 0 chr15 47997612 47998186 -55496788 - Lx2 LINE L1 -994 6003 5425 7 951 1419 164 60 8 chr15 47998186 47998451 -55496523 + Lx2 LINE L1 6718 6996 -1 7 951 376 263 0 48 chr15 47998468 47998572 -55496402 + RLTR20D LTR ERVK 480 578 0 7 951 485 183 128 40 chr15 47998572 47998720 -55496254 + RMER13A LTR ERVK 236 396 -464 7 951 656 38 18 45 chr15 47998807 47998917 -55496057 - L1Md_F3 LINE L1 -2 6582 6476 7 951 535 330 40 6 chr15 47999193 47999370 -55495604 - MTE-int LTR MaLR -1314 266 84 7 951 342 0 0 0 chr15 47999494 47999532 -55495442 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 951 486 277 80 34 chr15 47999630 47999869 -55495105 + L1MB1 LINE L1 5599 5848 -341 7 951 1093 83 7 0 chr15 48000880 48001024 -55493950 + B1_Mus1 SINE Alu 1 145 -3 1 951 180 0 0 0 chr15 48001066 48001086 -55493888 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 951 25 31 0 0 chr15 48001491 48001523 -55493451 + AT_rich Low_complexity Low_complexity 1 32 0 3 951 202 174 69 42 chr15 48001594 48001628 -55493346 + T-rich Low_complexity Low_complexity 43 78 0 4 951 456 72 0 0 chr15 48001628 48001697 -55493277 + (GTTTG)n Simple_repeat Simple_repeat 5 73 0 5 951 202 174 69 42 chr15 48001697 48001734 -55493240 + T-rich Low_complexity Low_complexity 5 42 0 6 951 564 336 24 31 chr15 48002013 48002305 -55492669 - B4A SINE B4 -2 290 1 7 951 216 111 0 0 chr15 48003234 48003270 -55491704 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 951 926 228 216 27 chr15 48004358 48004655 -55490319 - MTD LTR MaLR -65 354 2 9 951 22 35 0 0 chr15 48005178 48005207 -55489767 + AT_rich Low_complexity Low_complexity 1 29 0 1 951 24 32 0 0 chr15 48005881 48005912 -55489062 + AT_rich Low_complexity Low_complexity 1 31 0 1 951 501 96 42 0 chr15 48006530 48006614 -55488360 - L1_Mus3 LINE L1 -1779 5917 5824 1 951 3199 71 2 27 chr15 48006614 48007061 -55487913 + L1_Mus2 LINE L1 6131 6566 0 1 951 429 70 0 0 chr15 48008049 48008106 -55486868 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 951 561 30 0 0 chr15 48008108 48008175 -55486799 + (GA)n Simple_repeat Simple_repeat 2 68 0 1 951 734 218 62 0 chr15 48008179 48008372 -55486602 + Lx7 LINE L1 7474 7678 -18 1 951 3410 120 13 11 chr15 48008421 48008962 -55486012 + Lx3_Mus LINE L1 6463 7004 -5 1 951 369 62 0 0 chr15 48008963 48009011 -55485963 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 951 594 352 86 19 chr15 48009097 48009470 -55485504 + MLT1A1 LTR MaLR 3 400 -8 1 951 204 97 0 0 chr15 48009475 48009506 -55485468 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 951 404 371 58 40 chr15 48009870 48010148 -55484826 + RMER15 LTR ERVL 253 535 -40 2 951 234 0 0 0 chr15 48010484 48010510 -55484464 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 951 266 73 24 0 chr15 48010574 48010615 -55484359 + (AGGGGG)n Simple_repeat Simple_repeat 4 45 0 2 951 1672 214 118 49 chr15 48011294 48011870 -55483104 + Lx7 LINE L1 7075 7690 -6 2 951 240 111 0 0 chr15 48012376 48012412 -55482562 + (T)n Simple_repeat Simple_repeat 1 36 0 2 951 502 304 6 17 chr15 48012848 48013022 -55481952 - Lx8 LINE L1 -45 7428 7257 2 951 8399 105 35 10 chr15 48013120 48014462 -55480512 - MusHAL1 LINE L1 -629 2083 708 2 951 2759 167 0 14 chr15 48014464 48014937 -55480037 + Lx LINE L1 5373 5838 -1220 2 951 987 124 7 0 chr15 48014937 48015082 -55479892 + B1_Mm SINE Alu 2 147 0 2 951 4112 140 25 43 chr15 48015082 48015838 -55479136 + Lx LINE L1 5829 6503 -151 2 951 31 0 0 0 chr15 48017031 48017062 -55477912 + AT_rich Low_complexity Low_complexity 1 31 0 3 951 26 0 0 0 chr15 48017130 48017156 -55477818 + AT_rich Low_complexity Low_complexity 1 26 0 3 951 180 286 17 35 chr15 48017418 48017476 -55477498 + L3 LINE CR1 3252 3308 -1181 3 951 26 0 0 0 chr15 48018897 48018923 -55476051 + AT_rich Low_complexity Low_complexity 1 26 0 3 951 24 0 0 0 chr15 48019106 48019130 -55475844 + AT_rich Low_complexity Low_complexity 1 24 0 3 951 24 32 0 0 chr15 48019516 48019547 -55475427 + AT_rich Low_complexity Low_complexity 1 31 0 3 951 531 69 0 0 chr15 48019844 48019916 -55475058 + (CA)n Simple_repeat Simple_repeat 2 73 0 3 951 288 0 0 0 chr15 48021277 48021309 -55473665 + (TTGG)n Simple_repeat Simple_repeat 1 32 0 3 951 1122 89 7 0 chr15 48021314 48021460 -55473514 - B1_Mm SINE Alu 0 147 1 3 951 26 0 0 0 chr15 48021471 48021497 -55473477 + AT_rich Low_complexity Low_complexity 1 26 0 3 951 2700 130 78 2 chr15 48021497 48021943 -55473031 - Lx2 LINE L1 -74 6923 6444 4 951 313 384 55 4 chr15 48022192 48022430 -55472544 - Lx8 LINE L1 -254 7219 6970 4 951 22 56 0 0 chr15 48023758 48023794 -55471180 + AT_rich Low_complexity Low_complexity 1 36 0 4 951 322 320 119 48 chr15 48023982 48024251 -55470723 - L1MD3 LINE L1 -6 7989 7702 4 951 251 237 12 50 chr15 48025661 48025741 -55469233 + MTEa LTR MaLR 290 366 -13 4 951 241 77 19 37 chr15 48025972 48026026 -55468948 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 4 951 201 133 0 0 chr15 48026152 48026182 -55468792 + (CCCCCA)n Simple_repeat Simple_repeat 1 30 0 4 951 248 279 18 22 chr15 48026189 48026417 -55468557 + CT-rich Low_complexity Low_complexity 1 227 0 4 951 451 295 59 26 chr15 48027437 48027743 -55467231 + Lx7 LINE L1 7379 7694 -2 4 951 2004 253 62 132 chr15 48028434 48029700 -55465274 + Lx9 LINE L1 3723 4899 -948 4 951 401 0 20 0 chr15 48029700 48029749 -55465225 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 5 951 4437 246 164 26 chr15 48029753 48031473 -55463501 + Lx9 LINE L1 5617 7579 -65 4 951 3873 215 38 129 chr15 48031514 48032546 -55462428 - RMER21A LTR ERV1 -6 941 4 5 951 1446 269 65 10 chr15 48032633 48033016 -55461958 - MTD LTR MaLR -2 417 14 5 951 886 285 113 0 chr15 48033662 48033918 -55461056 - MTE2b LTR MaLR -9 370 86 5 951 805 345 73 24 chr15 48034430 48034884 -55460090 + Lx8 LINE L1 6829 7304 -169 5 951 500 300 0 8 chr15 48035104 48035225 -55459749 + RSINE1 SINE B4 2 121 -44 5 951 2717 193 28 28 chr15 48037722 48037828 -55457146 - RLTR20C LTR ERVK 0 534 433 5 951 432 0 0 0 chr15 48037828 48037876 -55457098 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 951 2717 193 28 28 chr15 48037876 48038303 -55456671 - RLTR20C LTR ERVK -102 432 1 5 951 392 168 149 16 chr15 48038330 48038451 -55456523 - MYSERV16_I-int LTR ERVK -23 2303 2167 5 951 16561 197 121 22 chr15 48038675 48039678 -55455296 + Lx5 LINE L1 892 2040 -3837 5 951 516 16 0 0 chr15 48039678 48039739 -55455235 + (TC)n Simple_repeat Simple_repeat 1 61 0 5 951 16561 192 122 27 chr15 48039739 48042082 -55452892 + Lx5 LINE L1 2041 4715 -1162 5 951 315 0 0 0 chr15 48042082 48042117 -55452857 + (TAA)n Simple_repeat Simple_repeat 2 36 0 6 951 16561 196 74 18 chr15 48042117 48044382 -55450592 + Lx5 LINE L1 4716 7033 -17 5 951 489 310 131 48 chr15 48044449 48044954 -55450020 - L1MA9 LINE L1 -394 5918 5363 6 951 207 350 19 6 chr15 48044986 48045147 -55449827 + (TG)n Simple_repeat Simple_repeat 2 164 0 6 951 293 380 15 0 chr15 48045383 48045492 -55449482 + B1F SINE Alu 2 115 -34 6 951 22 56 0 0 chr15 48046023 48046059 -55448915 + AT_rich Low_complexity Low_complexity 1 36 0 6 951 22 56 0 0 chr15 48046084 48046120 -55448854 + AT_rich Low_complexity Low_complexity 1 36 0 6 951 31 58 0 0 chr15 48046182 48046234 -55448740 + AT_rich Low_complexity Low_complexity 1 52 0 6 951 320 187 0 14 chr15 48046460 48046540 -55448434 + Lx2B LINE L1 6247 6326 -674 6 951 620 244 106 0 chr15 48046534 48046734 -55448240 + Lx3C LINE L1 6372 6627 -370 6 951 918 230 110 16 chr15 48046730 48047039 -55447935 + Lx2B LINE L1 6658 6995 -5 6 951 548 352 32 19 chr15 48047096 48047563 -55447411 + L1_Rod LINE L1 4604 5076 -771 6 951 305 344 0 8 chr15 48047558 48047681 -55447293 + L1_Mur3 LINE L1 5186 5307 -573 7 951 442 264 22 33 chr15 48047680 48047860 -55447114 + L1_Mur3 LINE L1 4484 4661 -1219 7 951 342 212 209 12 chr15 48047871 48048043 -55446931 + Lx9 LINE L1 7434 7639 -5 7 951 1711 126 31 21 chr15 48048259 48048550 -55446424 - Lx LINE L1 -2 6652 6359 7 951 477 290 80 64 chr15 48048552 48048740 -55446234 - RMER13B LTR ERVK -4 904 714 7 951 2829 225 20 91 chr15 48048750 48049617 -55445357 - RMER17B LTR ERVK -150 808 4 7 951 2894 129 2 2 chr15 48049617 48050044 -55444930 - Lx LINE L1 -299 6355 5929 7 951 243 314 88 0 chr15 48051009 48051146 -55443828 + L1MA8 LINE L1 6072 6220 -71 7 951 468 51 0 0 chr15 48051155 48051214 -55443760 + (TA)n Simple_repeat Simple_repeat 2 60 0 7 951 247 132 29 0 chr15 48051414 48051482 -55443492 + (TA)n Simple_repeat Simple_repeat 1 70 0 7 951 2776 60 0 3 chr15 48051482 48051836 -55443138 - L1_Mus2 LINE L1 -6 6560 6208 8 951 1197 84 0 0 chr15 48051836 48051991 -55442983 + L1_Mus2 LINE L1 6085 6239 -327 8 951 376 295 148 32 chr15 48051991 48052170 -55442804 - B3A SINE B2 -6 189 4 8 951 24 0 0 0 chr15 48052219 48052243 -55442731 + AT_rich Low_complexity Low_complexity 1 24 0 8 951 681 281 16 0 chr15 48052484 48052669 -55442305 + HERVL40-int LTR ERVL 5339 5526 -4 8 951 3600 175 67 3 chr15 48052802 48053517 -55441457 + L1_Mur1 LINE L1 5030 5790 -96 8 951 5891 139 30 11 chr15 48053527 48055118 -55439856 + L1VL4 LINE L1 190 1813 -1746 8 951 7317 116 4 9 chr15 48055120 48056545 -55438429 + L1_Mus4 LINE L1 5216 6632 -4 8 951 5441 194 50 15 chr15 48056551 48056870 -55438104 + Lx3C LINE L1 5775 6098 -878 8 951 4263 165 106 66 chr15 48056870 48057854 -55437120 + RLTR13D2 LTR ERVK 1 1023 0 8 951 5441 191 52 16 chr15 48057854 48058686 -55436288 + Lx3C LINE L1 6099 6972 -4 8 951 26 30 0 0 chr15 48058686 48058719 -55436255 + AT_rich Low_complexity Low_complexity 1 33 0 8 951 682 309 35 26 chr15 48058889 48059118 -55435856 + MTC-int LTR MaLR 758 988 -270 9 951 21 0 0 0 chr15 48059171 48059192 -55435782 + AT_rich Low_complexity Low_complexity 1 21 0 9 951 271 238 0 103 chr15 48059197 48059314 -55435660 - Lx9 LINE L1 -4 7640 7536 9 951 614 13 26 0 chr15 48059341 48059419 -55435555 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 9 951 1552 132 0 54 chr15 48059448 48059727 -55435247 + RMER19A LTR ERVK 474 737 0 9 951 459 313 14 0 chr15 48059789 48059936 -55435038 - B1_Mur2 SINE Alu 0 149 1 9 951 456 51 0 0 chr15 48059950 48060009 -55434965 + (TA)n Simple_repeat Simple_repeat 1 59 0 9 951 222 62 0 0 chr15 48060770 48060802 -55434172 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 951 251 306 40 10 chr15 48060822 48060921 -55434053 - RSINE1 SINE B4 -39 126 25 9 951 430 169 132 88 chr15 48062275 48062457 -55432517 + Lx7 LINE L1 7215 7404 -292 9 951 296 83 21 0 chr15 48062495 48062543 -55432431 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 951 243 288 0 90 chr15 48062586 48062708 -55432266 + Lx7 LINE L1 7563 7673 -23 9 951 1424 236 13 59 chr15 48062740 48063114 -55431860 - RMER20B LTR ERVK -146 481 125 1 951 249 57 0 0 chr15 48063247 48063282 -55431692 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 951 251 287 46 76 chr15 48063305 48063486 -55431488 + RLTR17 LTR ERVK 91 253 -439 1 951 1248 144 0 5 chr15 48063525 48063728 -55431246 - Lx LINE L1 -42 6612 6411 1 951 336 314 0 71 chr15 48063940 48064067 -55430907 + RLTR31_Mur LTR ERVK 436 553 0 1 951 201 121 0 0 chr15 48064459 48064492 -55430482 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 951 2025 100 43 0 chr15 48064501 48064801 -55430173 - RLTR13C1 LTR ERVK -125 858 546 1 951 2273 162 127 111 chr15 48064941 48065620 -55429354 + RMER6C LTR ERVK 1 690 0 1 951 295 379 11 0 chr15 48065692 48065787 -55429187 - RSINE1 SINE B4 -15 150 55 1 951 354 240 29 48 chr15 48066516 48066621 -55428353 - MER5B DNA MER1_type -73 105 3 1 951 4621 189 37 48 chr15 48066741 48067877 -55427097 + RLTR22_Mur LTR ERVK 1 1124 -724 1 951 183 139 0 0 chr15 48067877 48067913 -55427061 + (T)n Simple_repeat Simple_repeat 1 36 0 1 951 8305 43 0 7 chr15 48067919 48069100 -55425874 - L1Md_F2 LINE L1 0 6582 5415 1 951 8130 70 3 30 chr15 48069093 48070237 -55424737 + L1Md_F2 LINE L1 4264 5376 -507 1 951 1110 89 30 0 chr15 48070257 48070426 -55424548 - L1_Mus2 LINE L1 -1 6565 6392 1 951 3206 177 34 8 chr15 48070427 48071049 -55423925 + RLTR22_Mur LTR ERVK 1119 1756 -92 1 951 371 314 60 9 chr15 48071087 48071302 -55423672 - L1MA9 LINE L1 -292 6020 5795 1 951 381 279 71 64 chr15 48071399 48071682 -55423292 + RLTR15 LTR ERVK 50 334 -25 1 951 393 333 21 7 chr15 48071693 48071977 -55422997 - L1MA9 LINE L1 -509 5791 5504 1 951 189 74 0 0 chr15 48071997 48072024 -55422950 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 951 333 93 0 0 chr15 48072024 48072078 -55422896 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 951 1461 240 54 9 chr15 48072148 48072577 -55422397 + L1_Mur3 LINE L1 3917 4364 -1516 1 951 417 114 37 19 chr15 48072992 48073099 -55421875 + (TA)n Simple_repeat Simple_repeat 2 110 0 1 951 1709 223 65 123 chr15 48073099 48073367 -55421607 + L1_Mur3 LINE L1 4386 4628 -1252 1 951 351 0 0 0 chr15 48073367 48073406 -55421568 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 951 450 0 0 0 chr15 48073406 48073455 -55421519 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 951 1709 223 65 123 chr15 48073455 48073972 -55421002 + L1_Mur3 LINE L1 4629 5125 -755 1 951 1346 233 21 3 chr15 48074023 48074307 -55420667 + Lx7 LINE L1 6924 7212 -484 1 951 240 329 0 0 chr15 48074304 48074386 -55420588 - Lx6 LINE L1 -139 7321 7240 1 951 341 244 0 32 chr15 48074414 48074537 -55420437 + Lx6 LINE L1 7316 7434 -26 1 951 248 221 65 0 chr15 48074562 48074639 -55420335 + L1M2 LINE L1 5209 5290 -853 1 951 387 260 303 17 chr15 48075324 48075611 -55419363 - ORR1E LTR MaLR -4 375 1 1 951 234 0 0 0 chr15 48076564 48076590 -55418384 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 951 292 295 19 9 chr15 48076982 48077088 -55417886 + Lx9 LINE L1 7537 7643 -1 1 951 224 296 68 0 chr15 48077167 48077255 -55417719 - L3 LINE CR1 -1824 2665 2572 1 951 352 368 49 21 chr15 48077446 48077810 -55417164 + Lx9 LINE L1 6889 7399 -245 1 951 405 0 0 0 chr15 48077830 48077875 -55417099 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 951 419 227 0 7 chr15 48077936 48078091 -55416883 + (CA)n Simple_repeat Simple_repeat 1 154 0 1 951 25 31 0 0 chr15 48078323 48078355 -55416619 + AT_rich Low_complexity Low_complexity 1 32 0 1 951 494 57 0 14 chr15 48079898 48079969 -55415005 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 951 396 345 0 0 chr15 48082776 48082886 -55412088 - ID_B1 SINE B4 -8 216 107 1 951 694 247 18 18 chr15 48082929 48083094 -55411880 + ORR1B1 LTR MaLR 47 211 -183 1 951 186 71 0 0 chr15 48083119 48083147 -55411827 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1 951 981 232 4 35 chr15 48083154 48083198 -55411776 + ORR1A4 LTR MaLR 100 140 -189 1 951 1279 99 10 15 chr15 48083198 48083393 -55411581 - B2_Mm2 SINE B2 0 195 2 1 951 981 232 4 35 chr15 48083393 48083576 -55411398 + ORR1A4 LTR MaLR 141 320 -9 1 951 2671 99 2 37 chr15 48083594 48084004 -55410970 + L1Md_F2 LINE L1 6176 6571 -11 1 951 441 314 29 7 chr15 48084354 48084492 -55410482 + MIRb SINE MIR 118 258 -10 1 951 257 261 30 96 chr15 48084893 48085039 -55409935 + PB1 SINE Alu 12 141 -8 1 951 270 0 0 0 chr15 48085713 48085743 -55409231 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 951 315 0 0 0 chr15 48085743 48085777 -55409197 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 951 198 174 0 0 chr15 48085943 48085989 -55408985 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 951 495 0 0 0 chr15 48085989 48086044 -55408930 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 951 207 0 0 0 chr15 48086559 48086582 -55408392 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 951 603 0 0 0 chr15 48086582 48086648 -55408326 + (GA)n Simple_repeat Simple_repeat 2 68 0 1 951 254 297 67 13 chr15 48087392 48087542 -55407432 + L1M2 LINE L1 5583 5740 -551 1 951 7257 192 40 48 chr15 48087690 48088090 -55406884 + L1_Mur3 LINE L1 3310 3716 -2164 1 951 1479 47 0 5 chr15 48088090 48088281 -55406693 + L1_Mus1 LINE L1 6378 6567 0 1 951 7257 192 40 48 chr15 48088281 48089323 -55405651 + L1_Mur3 LINE L1 3717 4718 -1162 1 951 231 36 0 0 chr15 48089323 48089351 -55405623 + (TAA)n Simple_repeat Simple_repeat 3 30 0 1 951 7257 192 40 48 chr15 48089351 48089713 -55405261 + L1_Mur3 LINE L1 4719 5101 -779 1 951 5385 220 91 20 chr15 48089756 48090784 -55404190 - Lx5 LINE L1 -6 7044 5924 1 951 195 0 0 79 chr15 48090784 48090822 -55404152 + (CATAG)n Simple_repeat Simple_repeat 2 36 0 1 951 5385 220 91 20 chr15 48090822 48091129 -55403845 - Lx5 LINE L1 -1127 5923 5616 1 951 339 222 0 0 chr15 48091158 48091239 -55403735 + (CATATA)n Simple_repeat Simple_repeat 2 82 0 1 951 297 261 0 0 chr15 48091239 48091308 -55403666 - Lx5 LINE L1 -395 5482 5414 1 951 1703 190 39 0 chr15 48091299 48091662 -55403312 + L1_Mur2 LINE L1 3936 4312 -1565 1 951 207 0 0 0 chr15 48091969 48091992 -55402982 + (T)n Simple_repeat Simple_repeat 1 23 0 1 951 309 206 0 29 chr15 48091993 48092063 -55402911 - RMER15 LTR ERVL -92 483 416 1 951 7581 60 24 1 chr15 48092063 48093495 -55401479 - L1Md_F2 LINE L1 -1 6581 5123 1 951 31315 3 0 0 chr15 48093509 48097743 -55397231 - L1Md_A LINE L1 0 6582 2350 1 951 3547 86 5 66 chr15 48097734 48097877 -55397097 - L1Md_F2 LINE L1 -736 5147 5002 1 951 1428 63 5 33 chr15 48097877 48098089 -55396885 - L1Md_F3 LINE L1 -2 6582 6377 1 951 3547 86 5 66 chr15 48098089 48098504 -55396470 - L1Md_F2 LINE L1 -882 5001 4623 1 951 25 31 0 0 chr15 48098844 48098876 -55396098 + AT_rich Low_complexity Low_complexity 1 32 0 1 951 189 0 0 0 chr15 48099797 48099818 -55395156 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1 951 307 399 15 58 chr15 48100032 48100237 -55394737 + B3A SINE B2 3 198 0 1 951 2908 83 8 2 chr15 48101233 48101633 -55393341 + L1_Mus2 LINE L1 6165 6566 0 1 951 3399 34 0 21 chr15 48101896 48102317 -55392657 + L1Md_F3 LINE L1 6172 6583 -1 1 951 21 82 0 0 chr15 48102397 48102446 -55392528 + AT_rich Low_complexity Low_complexity 1 49 0 1 952 1499 328 79 28 chr15 48103520 48104203 -55390771 + ORR1B2-int LTR MaLR 15 732 -848 1 952 1591 313 96 39 chr15 48104223 48104858 -55390116 + ORR1B2-int LTR MaLR 902 1572 -8 1 952 1824 168 79 3 chr15 48104929 48105269 -55389705 + ORR1B2 LTR MaLR 1 366 -1 1 952 476 368 47 19 chr15 48105274 48105487 -55389487 + MTEb LTR MaLR 63 281 -98 1 952 269 149 15 0 chr15 48105520 48105587 -55389387 + A-rich Low_complexity Low_complexity 4 71 0 1 952 23 78 0 0 chr15 48106409 48106460 -55388514 + AT_rich Low_complexity Low_complexity 1 51 0 1 952 285 68 0 0 chr15 48107317 48107361 -55387613 + Lx LINE L1 6600 6643 -11 1 952 1173 260 12 55 chr15 48107356 48107702 -55387272 + Lx7 LINE L1 7048 7378 -318 1 952 21 57 0 0 chr15 48107850 48107885 -55387089 + AT_rich Low_complexity Low_complexity 1 35 0 1 952 896 169 6 0 chr15 48109398 48109576 -55385398 + CT-rich Low_complexity Low_complexity 2 180 0 1 952 324 65 0 21 chr15 48109576 48109623 -55385351 + (TTTC)n Simple_repeat Simple_repeat 2 47 0 1 952 497 269 132 58 chr15 48109623 48109828 -55385146 - Lx6 LINE L1 0 7460 7241 1 952 984 131 77 0 chr15 48109989 48110157 -55384817 + B2_Mm2 SINE B2 1 181 -14 1 952 1008 296 54 75 chr15 48110170 48110652 -55384322 + RLTR20B3 LTR ERVK 1 472 -105 1 952 2007 108 0 7 chr15 48110652 48110949 -55384025 + L1Md_F2 LINE L1 6288 6582 0 1 952 899 267 6 111 chr15 48110949 48111027 -55383947 + RLTR11A LTR ERVK 439 511 -17 1 952 23 0 0 0 chr15 48112081 48112104 -55382870 + AT_rich Low_complexity Low_complexity 1 23 0 1 952 387 0 0 0 chr15 48112807 48112850 -55382124 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 952 453 19 0 0 chr15 48112850 48112904 -55382070 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 952 240 100 0 0 chr15 48113298 48113338 -55381636 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 952 407 170 17 102 chr15 48113705 48113823 -55381151 + MT2B LTR ERVL 157 264 -337 1 952 1061 57 7 0 chr15 48113717 48113858 -55381116 + B1_Mus2 SINE Alu 6 147 0 1 952 24 32 0 0 chr15 48114395 48114426 -55380548 + AT_rich Low_complexity Low_complexity 1 31 0 1 952 660 295 58 107 chr15 48115334 48115698 -55379276 - MTE2a LTR MaLR -20 359 14 1 952 456 19 0 0 chr15 48116244 48116297 -55378677 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 952 21 0 0 0 chr15 48116366 48116387 -55378587 + AT_rich Low_complexity Low_complexity 1 21 0 1 952 545 28 14 0 chr15 48116469 48116540 -55378434 + (TC)n Simple_repeat Simple_repeat 1 72 0 1 952 552 304 77 0 chr15 48116714 48116921 -55378053 - B4A SINE B4 -60 232 10 1 952 423 0 0 0 chr15 48117526 48117573 -55377401 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 952 274 163 0 0 chr15 48118121 48118170 -55376804 + L1_Mur2 LINE L1 2434 2482 -3395 1 952 1748 175 241 7 chr15 48118178 48118455 -55376519 + L1_Mur2 LINE L1 3374 3706 -2171 1 952 1024 89 0 58 chr15 48118455 48118610 -55376364 + B1_Mus2 SINE Alu 2 147 0 1 952 1748 175 241 7 chr15 48118610 48118880 -55376094 + L1_Mur2 LINE L1 3707 4049 -1828 1 952 189 0 0 0 chr15 48119417 48119438 -55375536 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 952 23 54 0 0 chr15 48119500 48119537 -55375437 + AT_rich Low_complexity Low_complexity 1 37 0 1 952 333 0 0 0 chr15 48119825 48119862 -55375112 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 952 193 324 63 154 chr15 48120118 48120293 -55374681 - MER5B DNA MER1_type -19 159 1 2 952 180 0 0 0 chr15 48120353 48120373 -55374601 + (GA)n Simple_repeat Simple_repeat 2 21 0 2 952 30 45 0 0 chr15 48121864 48121908 -55373066 + AT_rich Low_complexity Low_complexity 1 44 0 2 952 183 270 74 74 chr15 48122086 48122194 -55372780 - L4 LINE RTE -1424 605 498 2 952 26 0 0 0 chr15 48122700 48122726 -55372248 + AT_rich Low_complexity Low_complexity 1 26 0 2 952 31 99 0 0 chr15 48123819 48123920 -55371054 + AT_rich Low_complexity Low_complexity 1 101 0 2 952 362 370 6 72 chr15 48125240 48125261 -55369713 - RSINE1 SINE B4 -2 163 145 2 952 318 26 0 0 chr15 48125261 48125300 -55369674 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 952 362 370 6 72 chr15 48125300 48125444 -55369530 - RSINE1 SINE B4 -21 144 9 2 952 329 133 13 0 chr15 48125528 48125603 -55369371 + (TG)n Simple_repeat Simple_repeat 2 77 0 2 952 462 175 225 0 chr15 48126431 48126551 -55368423 - B1_Mus1 SINE Alu 0 148 2 2 952 30 0 0 0 chr15 48127562 48127592 -55367382 + AT_rich Low_complexity Low_complexity 1 30 0 2 952 23 68 0 0 chr15 48128147 48128191 -55366783 + AT_rich Low_complexity Low_complexity 1 44 0 2 952 1763 200 11 32 chr15 48130316 48130688 -55364286 + ORR1B2 LTR MaLR 2 365 -2 2 952 2224 254 61 36 chr15 48130701 48131477 -55363497 + ORR1B2-int LTR MaLR 16 810 -699 2 952 680 205 8 8 chr15 48131468 48131596 -55363378 + ORR1B2 LTR MaLR 236 363 -4 2 952 2467 196 10 8 chr15 48131597 48132085 -55362889 - Lx3C LINE L1 -348 6628 6140 2 952 21 0 0 0 chr15 48132104 48132125 -55362849 + GC_rich Low_complexity Low_complexity 1 21 0 2 952 1089 88 14 21 chr15 48132206 48132484 -55362490 + (GAAA)n Simple_repeat Simple_repeat 1 275 0 2 952 823 254 78 28 chr15 48133602 48133883 -55361091 + Lx5 LINE L1 6723 7047 -11 2 952 24 67 0 0 chr15 48133939 48133984 -55360990 + AT_rich Low_complexity Low_complexity 1 45 0 2 952 25 31 0 0 chr15 48134425 48134457 -55360517 + AT_rich Low_complexity Low_complexity 1 32 0 2 952 286 296 62 47 chr15 48134491 48134635 -55360339 - B1F1 SINE Alu -1 148 3 2 952 227 351 0 72 chr15 48134565 48134648 -55360326 - B4A SINE B4 -135 157 81 2 952 26 0 0 0 chr15 48134702 48134728 -55360246 + AT_rich Low_complexity Low_complexity 1 26 0 2 952 272 258 8 55 chr15 48136840 48136967 -55358007 + GA-rich Low_complexity Low_complexity 2 122 0 2 952 258 136 0 0 chr15 48137478 48137522 -55357452 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 952 1247 273 100 3 chr15 48138367 48138716 -55356258 + Lx6 LINE L1 7059 7441 -19 2 952 1192 75 6 0 chr15 48139104 48139270 -55355704 + L1Md_F2 LINE L1 6393 6559 -23 2 952 231 61 0 0 chr15 48139270 48139303 -55355671 + (TAA)n Simple_repeat Simple_repeat 1 33 0 2 952 25 31 0 0 chr15 48139939 48139971 -55355003 + AT_rich Low_complexity Low_complexity 1 32 0 2 952 1176 28 0 0 chr15 48140638 48140779 -55354195 + B1_Mm SINE Alu 1 141 -6 2 952 305 0 0 48 chr15 48140781 48140823 -55354151 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 2 952 21 57 0 0 chr15 48140990 48141025 -55353949 + AT_rich Low_complexity Low_complexity 1 35 0 2 952 1667 248 53 8 chr15 48141812 48142280 -55352694 + Lx9 LINE L1 7023 7511 -133 2 952 263 173 17 43 chr15 48142354 48142469 -55352505 + (TA)n Simple_repeat Simple_repeat 1 112 0 2 952 466 217 30 24 chr15 48142470 48142635 -55352339 + Lx9 LINE L1 7478 7643 -1 2 952 617 145 0 17 chr15 48142714 48142833 -55352141 + GA-rich Low_complexity Low_complexity 3 119 0 2 952 261 119 0 0 chr15 48143968 48144010 -55350964 + (T)n Simple_repeat Simple_repeat 1 42 0 2 952 21 36 0 0 chr15 48144053 48144081 -55350893 + AT_rich Low_complexity Low_complexity 1 28 0 2 952 23 33 0 0 chr15 48144752 48144782 -55350192 + AT_rich Low_complexity Low_complexity 1 30 0 2 952 21 36 0 0 chr15 48146322 48146350 -55348624 + AT_rich Low_complexity Low_complexity 1 28 0 2 952 2148 168 10 5 chr15 48146738 48147122 -55347852 - L1_Mur2 LINE L1 -1512 4365 3980 2 952 564 56 0 0 chr15 48147934 48148006 -55346968 + (TG)n Simple_repeat Simple_repeat 2 73 0 2 952 334 293 0 48 chr15 48148033 48148137 -55346837 - B3A SINE B2 -96 102 4 2 952 198 270 117 75 chr15 48148718 48148838 -55346136 + L2a LINE L2 3301 3425 -1 2 952 28 61 0 0 chr15 48149318 48149367 -55345607 + AT_rich Low_complexity Low_complexity 1 49 0 2 952 22 0 0 0 chr15 48149723 48149745 -55345229 + AT_rich Low_complexity Low_complexity 1 22 0 2 952 28 48 0 0 chr15 48149926 48149968 -55345006 + AT_rich Low_complexity Low_complexity 1 42 0 2 952 180 111 0 0 chr15 48150332 48150359 -55344615 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2 952 21 36 0 0 chr15 48150493 48150521 -55344453 + AT_rich Low_complexity Low_complexity 1 28 0 2 952 21 36 0 0 chr15 48150914 48150942 -55344032 + AT_rich Low_complexity Low_complexity 1 28 0 2 952 23 54 0 0 chr15 48151509 48151546 -55343428 + AT_rich Low_complexity Low_complexity 1 37 0 2 952 219 214 47 12 chr15 48151717 48151802 -55343172 + (TAAA)n Simple_repeat Simple_repeat 1 88 0 2 952 279 0 0 0 chr15 48152799 48152830 -55342144 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 952 213 121 0 0 chr15 48154441 48154474 -55340500 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 952 342 107 0 0 chr15 48154505 48154561 -55340413 + (TAA)n Simple_repeat Simple_repeat 1 56 0 2 952 241 209 59 15 chr15 48155024 48155092 -55339882 + MER53 DNA hAT 9 79 -114 2 952 842 81 16 0 chr15 48155621 48155744 -55339230 + (TCTCCC)n Simple_repeat Simple_repeat 5 129 0 2 952 2737 139 89 21 chr15 48155922 48156437 -55338537 + Lx3A LINE L1 6423 6972 -9 2 952 599 269 184 30 chr15 48157068 48157639 -55337335 - L1_Mur3 LINE L1 -1853 3994 3335 2 952 1480 204 85 48 chr15 48158169 48158544 -55336430 + ORR1B1 LTR MaLR 1 389 -5 2 952 410 303 137 58 chr15 48158566 48159242 -55335732 - L1_Mur3 LINE L1 -2881 2999 2276 2 952 1048 95 0 33 chr15 48159242 48159394 -55335580 + B1_Mus1 SINE Alu 2 148 0 2 952 410 303 137 58 chr15 48159394 48159572 -55335402 - L1_Mur3 LINE L1 -3605 2275 2079 2 952 259 308 147 11 chr15 48159638 48159822 -55335152 - L1_Rod LINE L1 -3852 1995 1787 2 952 4240 222 75 18 chr15 48159867 48160905 -55334069 + Lx5 LINE L1 5943 7039 -11 2 952 421 247 69 29 chr15 48160914 48161089 -55333885 - L1_Rod LINE L1 -4052 1795 1614 2 952 2671 221 94 32 chr15 48161091 48161498 -55333476 + RMER12 LTR ERVK 358 765 -557 2 952 441 54 0 0 chr15 48161498 48161554 -55333420 + (TCCA)n Simple_repeat Simple_repeat 3 58 0 2 952 2671 253 91 47 chr15 48161554 48162101 -55332873 + RMER12 LTR ERVK 766 1842 -6 2 952 441 0 0 0 chr15 48162142 48162191 -55332783 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 952 21 0 0 0 chr15 48163203 48163224 -55331750 + AT_rich Low_complexity Low_complexity 1 21 0 2 952 377 354 63 0 chr15 48163334 48163461 -55331513 - B1F SINE Alu -11 138 4 2 952 260 319 74 11 chr15 48163867 48163962 -55331012 + PB1D10 SINE Alu 10 110 -7 2 952 23 33 0 0 chr15 48164440 48164470 -55330504 + AT_rich Low_complexity Low_complexity 1 30 0 2 952 30 0 0 0 chr15 48165059 48165089 -55329885 + AT_rich Low_complexity Low_complexity 1 30 0 2 952 979 158 52 104 chr15 48165158 48165426 -55329548 - Lx3B LINE L1 -3 6970 6717 2 952 408 299 37 21 chr15 48165470 48165658 -55329316 - L1_Mur3 LINE L1 -755 5125 4935 2 952 1083 64 0 7 chr15 48165679 48165820 -55329154 + B1_Mus2 SINE Alu 1 140 -7 2 952 205 182 0 0 chr15 48165821 48165865 -55329109 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 2 952 22 35 0 0 chr15 48166231 48166260 -55328714 + AT_rich Low_complexity Low_complexity 1 29 0 2 952 198 222 0 0 chr15 48167104 48167158 -55327816 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 952 296 263 0 9 chr15 48167198 48167313 -55327661 + Lx9 LINE L1 7458 7571 -73 2 952 321 301 26 97 chr15 48167691 48167886 -55327088 + B2_Mm2 SINE B2 5 185 -10 2 952 336 310 217 6 chr15 48168133 48168308 -55326666 + Lx8 LINE L1 6308 6519 -954 2 952 528 291 20 10 chr15 48169252 48169453 -55325521 + L1MA6 LINE L1 5766 5968 -332 2 952 39 68 0 0 chr15 48170170 48170244 -55324730 + AT_rich Low_complexity Low_complexity 1 74 0 2 952 1627 253 62 7 chr15 48170863 48171301 -55323673 + Lx7 LINE L1 6708 7169 -527 2 952 2576 77 8 3 chr15 48171315 48171666 -55323308 + L1_Mus1 LINE L1 6214 6566 -1 2 952 7804 137 11 17 chr15 48171676 48172987 -55321987 - L1_Mus3 LINE L1 -873 5010 3708 2 952 2229 151 23 77 chr15 48172959 48173440 -55321534 + L1_Mus3 LINE L1 5040 5494 -389 2 952 4870 124 77 1 chr15 48173440 48174008 -55320966 + L1_Mus3 LINE L1 5757 6348 -290 2 952 459 35 0 0 chr15 48174008 48174065 -55320909 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 952 4870 124 77 1 chr15 48174065 48174316 -55320658 + L1_Mus3 LINE L1 6349 6637 -1 2 952 6827 110 9 1 chr15 48174318 48175353 -55319621 - L1_Mus2 LINE L1 -957 4926 3884 2 952 6738 112 7 7 chr15 48175352 48176460 -55318514 + L1_Mus2 LINE L1 4991 6101 -465 2 952 2925 79 8 0 chr15 48176460 48176853 -55318121 + MTA_Mm LTR MaLR 1 396 0 2 952 6738 99 10 12 chr15 48176853 48177320 -55317654 + L1_Mus2 LINE L1 6102 6564 -2 2 952 245 75 0 24 chr15 48177325 48177366 -55317608 + (GAAAA)n Simple_repeat Simple_repeat 5 44 0 2 952 384 246 81 16 chr15 48177366 48177490 -55317484 + Lx7 LINE L1 7138 7269 -427 2 952 468 0 0 0 chr15 48177591 48177643 -55317331 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 952 561 208 0 0 chr15 48178680 48178853 -55316121 + CT-rich Low_complexity Low_complexity 2 174 0 2 952 28 48 0 0 chr15 48179200 48179242 -55315732 + AT_rich Low_complexity Low_complexity 1 42 0 2 952 228 139 101 0 chr15 48179381 48179460 -55315514 + (TA)n Simple_repeat Simple_repeat 2 88 0 2 952 369 0 0 0 chr15 48180069 48180110 -55314864 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 952 913 276 127 56 chr15 48180685 48181023 -55313951 - Lx6 LINE L1 -73 7387 7026 2 952 462 125 0 0 chr15 48181295 48181375 -55313599 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 2 952 22 35 0 0 chr15 48182154 48182183 -55312791 + AT_rich Low_complexity Low_complexity 1 29 0 2 952 392 94 0 0 chr15 48183369 48183422 -55311552 - L1_Mus3 LINE L1 -360 6278 6226 2 952 2679 113 7 0 chr15 48183423 48183830 -55311144 + L1_Mus3 LINE L1 6229 6638 0 2 952 25 31 0 0 chr15 48183862 48183894 -55311080 + AT_rich Low_complexity Low_complexity 1 32 0 2 952 31 44 0 0 chr15 48186062 48186107 -55308867 + AT_rich Low_complexity Low_complexity 1 45 0 2 952 1130 68 7 0 chr15 48186400 48186546 -55308428 - B1_Mus1 SINE Alu 0 148 2 2 952 270 176 0 0 chr15 48186683 48186734 -55308240 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 952 213 312 31 0 chr15 48186932 48186996 -55307978 - ID SINE ID -157 67 2 3 952 262 197 151 32 chr15 48187021 48187147 -55307827 - Lx9 LINE L1 -1 7643 7503 3 952 22 70 0 0 chr15 48187450 48187493 -55307481 + AT_rich Low_complexity Low_complexity 1 43 0 3 952 21 0 0 0 chr15 48187537 48187558 -55307416 + AT_rich Low_complexity Low_complexity 1 21 0 3 952 21 57 0 0 chr15 48188388 48188423 -55306551 + AT_rich Low_complexity Low_complexity 1 35 0 3 952 21 71 0 0 chr15 48188946 48188988 -55305986 + AT_rich Low_complexity Low_complexity 1 42 0 3 952 24 53 0 0 chr15 48189185 48189223 -55305751 + AT_rich Low_complexity Low_complexity 1 38 0 3 952 252 0 0 0 chr15 48189514 48189542 -55305432 + (A)n Simple_repeat Simple_repeat 1 28 0 3 952 21 0 0 0 chr15 48191140 48191161 -55303813 + AT_rich Low_complexity Low_complexity 1 21 0 3 952 6563 67 12 5 chr15 48192139 48193001 -55301973 - L1Md_F2 LINE L1 -12 6570 5712 3 952 198 0 0 0 chr15 48193592 48193614 -55301360 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 3 952 21 0 0 0 chr15 48193847 48193868 -55301106 + AT_rich Low_complexity Low_complexity 1 21 0 3 952 390 178 2 4 chr15 48194091 48194170 -55300804 + L1_Rod LINE L1 4620 4751 -1392 3 952 475 347 58 26 chr15 48194201 48194355 -55300619 - B3A SINE B2 -38 160 2 3 952 1332 260 31 52 chr15 48194357 48194897 -55300077 + L1_Rod LINE L1 4704 5232 -615 3 952 1480 288 19 3 chr15 48195006 48195368 -55299606 - MTD LTR MaLR -7 412 45 3 952 336 257 152 5 chr15 48195535 48195719 -55299255 + Lx9 LINE L1 7385 7595 -49 3 952 43 35 0 0 chr15 48195744 48195801 -55299173 + AT_rich Low_complexity Low_complexity 1 57 0 3 952 231 114 0 0 chr15 48195955 48195999 -55298975 + (A)n Simple_repeat Simple_repeat 1 44 0 3 952 21 0 0 0 chr15 48196427 48196448 -55298526 + AT_rich Low_complexity Low_complexity 1 21 0 3 952 14079 200 92 20 chr15 48196824 48199134 -55295840 + L1_Mur1 LINE L1 806 3391 -2495 3 952 5228 129 86 6 chr15 48199134 48200021 -55294953 - RMER17B LTR ERVK 0 958 1 3 952 14079 197 105 13 chr15 48200021 48201692 -55293282 + L1_Mur1 LINE L1 3392 5088 -798 3 952 1706 226 16 20 chr15 48201692 48202114 -55292860 + Lx2B LINE L1 6495 6936 -40 3 952 22 0 0 0 chr15 48202126 48202148 -55292826 + AT_rich Low_complexity Low_complexity 1 22 0 3 952 27 49 0 0 chr15 48202826 48202867 -55292107 + AT_rich Low_complexity Low_complexity 1 41 0 3 952 219 196 0 19 chr15 48202873 48202925 -55292049 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 952 3035 127 20 18 chr15 48202946 48203434 -55291540 - Lx2 LINE L1 0 6997 6509 3 952 333 68 0 0 chr15 48203603 48203647 -55291327 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 952 819 261 40 62 chr15 48203652 48203993 -55290981 + MT2A LTR ERVL 1 477 -124 3 952 1138 79 0 6 chr15 48203994 48204160 -55290814 + L1Md_F2 LINE L1 6404 6568 -14 3 952 1765 270 63 30 chr15 48204391 48204994 -55289980 + Lx7 LINE L1 5808 6430 -1266 3 952 246 154 58 0 chr15 48205002 48205054 -55289920 - RMER6C LTR ERVK -136 554 500 3 952 593 238 0 27 chr15 48205161 48205308 -55289666 - RMER6-int LTR ERVK -3034 143 1 3 952 211 50 75 0 chr15 48205311 48205351 -55289623 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 952 1536 197 32 18 chr15 48205355 48205696 -55289278 + RMER6C LTR ERVK 14 359 -331 3 952 457 195 26 17 chr15 48205776 48205891 -55289083 - RMER6-int LTR ERVK -3026 151 36 3 952 904 134 146 0 chr15 48205988 48206152 -55288822 + RMER6C LTR ERVK 501 688 -2 3 952 3708 252 21 7 chr15 48206165 48207029 -55287945 + Lx7 LINE L1 6485 7360 -336 3 952 397 272 50 22 chr15 48207039 48207178 -55287796 + Lx7 LINE L1 7554 7696 0 3 952 23 0 0 0 chr15 48207370 48207393 -55287581 + AT_rich Low_complexity Low_complexity 1 23 0 3 952 311 345 29 17 chr15 48207407 48207694 -55287280 + L1MD LINE L1 4107 4399 -1747 3 952 361 129 0 0 chr15 48208278 48208340 -55286634 - L1_Mur2 LINE L1 -2190 3687 3626 3 952 12868 146 6 14 chr15 48208340 48209105 -55285869 + L1_Mus3 LINE L1 3686 4429 -1454 3 952 5370 37 0 0 chr15 48209105 48209749 -55285225 + L1Md_T LINE L1 5939 6582 0 3 952 12868 123 9 13 chr15 48209749 48211951 -55283023 + L1_Mus3 LINE L1 4430 6634 -4 3 952 979 109 7 0 chr15 48211974 48212112 -55282862 + B1_Mus1 SINE Alu 3 141 -7 3 952 185 94 0 30 chr15 48212115 48212148 -55282826 + (TAA)n Simple_repeat Simple_repeat 2 33 0 3 952 187 85 66 33 chr15 48212203 48212264 -55282710 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 3 952 860 77 0 0 chr15 48212343 48212460 -55282514 - B1_Mus2 SINE Alu -29 118 2 3 952 287 102 0 0 chr15 48212460 48212503 -55282471 + B1_Mus2 SINE Alu 105 147 0 3 952 276 100 0 0 chr15 48212503 48212543 -55282431 + (A)n Simple_repeat Simple_repeat 1 40 0 3 952 4947 110 59 1 chr15 48212547 48213304 -55281670 - Lx3_Mus LINE L1 -124 5762 4962 3 952 7783 110 28 10 chr15 48213304 48214545 -55280429 + Lx3_Mus LINE L1 5745 7008 -1 3 952 23 0 0 0 chr15 48215081 48215104 -55279870 + AT_rich Low_complexity Low_complexity 1 23 0 3 952 26 0 0 0 chr15 48215264 48215290 -55279684 + AT_rich Low_complexity Low_complexity 1 26 0 3 952 338 80 53 13 chr15 48215397 48215473 -55279501 + (CAAA)n Simple_repeat Simple_repeat 2 80 0 3 952 23 54 0 0 chr15 48216425 48216462 -55278512 + AT_rich Low_complexity Low_complexity 1 37 0 3 952 612 345 70 12 chr15 48216564 48216966 -55278008 - Lx8 LINE L1 -446 7027 6603 3 952 190 292 149 9 chr15 48217443 48217550 -55277424 - L2 LINE L2 -846 2573 2452 3 952 214 255 0 0 chr15 48218202 48218253 -55276721 + T-rich Low_complexity Low_complexity 3 53 0 3 952 221 0 35 0 chr15 48218887 48218916 -55276058 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 3 952 947 67 0 0 chr15 48218918 48219052 -55275922 - L1Md_F2 LINE L1 -19 6563 6430 3 952 21 36 0 0 chr15 48221491 48221519 -55273455 + AT_rich Low_complexity Low_complexity 1 28 0 3 952 591 366 46 18 chr15 48221640 48221924 -55273050 - B4A SINE B4 0 292 1 3 952 367 279 32 32 chr15 48222654 48222780 -55272194 - B1F SINE Alu -7 142 17 3 952 24 32 0 0 chr15 48222884 48222915 -55272059 + AT_rich Low_complexity Low_complexity 1 31 0 3 952 206 32 32 0 chr15 48222915 48222946 -55272028 + (TATAA)n Simple_repeat Simple_repeat 2 33 0 3 952 367 321 58 7 chr15 48223063 48223201 -55271773 + B3A SINE B2 2 146 -52 3 952 4110 209 13 10 chr15 48223260 48224125 -55270849 + Lx2B LINE L1 6131 6997 -3 3 952 2017 222 86 30 chr15 48224140 48224678 -55270296 + RLTR20D LTR ERVK 1 568 0 3 952 3504 15 2 0 chr15 48224739 48225134 -55269840 - MTA_Mm LTR MaLR 0 396 1 3 952 693 285 0 0 chr15 48225630 48225788 -55269186 + Lx6 LINE L1 7061 7218 -242 3 952 477 226 0 0 chr15 48225790 48225883 -55269091 - RMER6C LTR ERVK -105 585 493 3 952 636 97 35 9 chr15 48225894 48226008 -55268966 + (CATA)n Simple_repeat Simple_repeat 2 118 0 3 952 219 36 0 0 chr15 48226010 48226038 -55268936 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 952 204 228 0 0 chr15 48226219 48226276 -55268698 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 952 267 31 0 0 chr15 48226280 48226312 -55268662 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 952 484 15 15 15 chr15 48226312 48226377 -55268597 + (GA)n Simple_repeat Simple_repeat 1 66 0 3 952 400 301 53 41 chr15 48226612 48226782 -55268192 - RMER13B LTR ERVK -9 899 728 3 952 271 292 200 0 chr15 48226775 48226895 -55268079 + MTEb LTR MaLR 236 379 0 3 952 279 93 0 0 chr15 48227270 48227313 -55267661 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 952 184 194 0 0 chr15 48227602 48227633 -55267341 - L3 LINE CR1 -697 3792 3762 3 952 282 116 0 0 chr15 48228132 48228175 -55266799 + (TTTG)n Simple_repeat Simple_repeat 3 45 0 3 952 1806 45 0 5 chr15 48228272 48228494 -55266480 - L1Md_F2 LINE L1 -200 6382 6162 3 952 1217 105 10 10 chr15 48228494 48228687 -55266287 + L1_Mus1 LINE L1 6373 6565 -2 3 952 1480 281 23 7 chr15 48228718 48229151 -55265823 + Lx9 LINE L1 6992 7431 -213 3 952 231 188 0 0 chr15 48229151 48229199 -55265775 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 14 35370 35 0 0 chr15 48229318 48234957 -55260017 + L1Md_Gf LINE L1 1 5589 -297 3 953 8882 5 6 0 chr15 48234957 48235947 -55259027 + L1Md_T LINE L1 5587 6582 0 3 953 304 280 36 45 chr15 48236195 48236307 -55258667 + HAL1-3A_ME LINE L1 1961 2071 -787 3 953 21 0 0 0 chr15 48236455 48236476 -55258498 + AT_rich Low_complexity Low_complexity 1 21 0 3 953 1081 44 0 0 chr15 48236705 48236847 -55258127 + L1_Mm LINE L1 5460 5614 -628 3 953 8192 37 8 0 chr15 48236847 48237835 -55257139 + L1Md_F2 LINE L1 5587 6582 0 3 953 875 135 0 0 chr15 48237835 48237848 -55257126 + L1_Mm LINE L1 5590 5602 -284 3 953 23 0 0 0 chr15 48237896 48237919 -55257055 + AT_rich Low_complexity Low_complexity 1 23 0 3 953 5423 205 11 16 chr15 48237975 48239047 -55255927 + Lx2B LINE L1 5906 6972 -28 3 953 324 158 0 0 chr15 48239077 48239134 -55255840 + A-rich Low_complexity Low_complexity 1 57 0 3 953 506 234 32 0 chr15 48239136 48239260 -55255714 - B1_Mm SINE Alu -15 132 5 3 953 24 0 0 0 chr15 48239357 48239381 -55255593 + AT_rich Low_complexity Low_complexity 1 24 0 3 953 209 203 51 0 chr15 48241048 48241107 -55253867 + CT-rich Low_complexity Low_complexity 4 65 0 3 953 267 336 4 136 chr15 48242132 48242205 -55252769 + Lx6 LINE L1 6815 6874 -176 3 953 1508 58 16 0 chr15 48242205 48242395 -55252579 - B2_Mm2 SINE B2 -1 194 2 3 953 459 265 26 87 chr15 48242395 48242587 -55252387 + Lx6 LINE L1 7258 7433 -27 3 953 23 33 0 0 chr15 48242587 48242617 -55252357 + AT_rich Low_complexity Low_complexity 1 30 0 3 953 24 53 0 0 chr15 48242636 48242674 -55252300 + AT_rich Low_complexity Low_complexity 1 38 0 3 953 3016 210 31 42 chr15 48242931 48243630 -55251344 + RLTR17 LTR ERVK 1 692 0 3 953 318 115 0 0 chr15 48243787 48243848 -55251126 + (A)n Simple_repeat Simple_repeat 1 61 0 3 953 22 35 0 0 chr15 48246135 48246164 -55248810 + AT_rich Low_complexity Low_complexity 1 29 0 4 953 492 18 0 0 chr15 48246307 48246364 -55248610 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 4 953 489 34 0 0 chr15 48247231 48247290 -55247684 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 953 33 66 0 0 chr15 48247530 48247591 -55247383 + AT_rich Low_complexity Low_complexity 1 61 0 4 953 22 0 0 0 chr15 48247784 48247806 -55247168 + AT_rich Low_complexity Low_complexity 1 22 0 4 953 25 31 0 0 chr15 48248174 48248206 -55246768 + AT_rich Low_complexity Low_complexity 1 32 0 4 953 1641 201 38 67 chr15 48248248 48248723 -55246251 - RMER6C LTR ERVK -2 688 228 4 953 264 59 0 0 chr15 48248763 48248797 -55246177 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 953 232 228 11 21 chr15 48248908 48249002 -55245972 + (TATATG)n Simple_repeat Simple_repeat 3 95 0 4 953 21 0 0 0 chr15 48249316 48249337 -55245637 + AT_rich Low_complexity Low_complexity 1 21 0 4 953 640 191 61 37 chr15 48249342 48249505 -55245469 + Lx3C LINE L1 6809 6975 -1 4 953 22 35 0 0 chr15 48249668 48249697 -55245277 + AT_rich Low_complexity Low_complexity 1 29 0 4 953 1950 319 31 36 chr15 48249909 48250741 -55244233 + Lx9 LINE L1 6606 7433 -211 4 953 321 89 0 0 chr15 48250755 48250800 -55244174 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 953 25 31 0 0 chr15 48251597 48251629 -55243345 + AT_rich Low_complexity Low_complexity 1 32 0 4 953 31 26 0 0 chr15 48251702 48251740 -55243234 + AT_rich Low_complexity Low_complexity 1 38 0 4 953 223 155 60 0 chr15 48251748 48251832 -55243142 + (TA)n Simple_repeat Simple_repeat 2 90 0 4 953 981 96 13 33 chr15 48251959 48252110 -55242864 + B1_Mus1 SINE Alu 1 148 0 4 953 255 125 14 27 chr15 48252110 48252184 -55242790 + (CAAA)n Simple_repeat Simple_repeat 4 76 0 4 953 838 170 144 103 chr15 48253194 48253609 -55241365 + L1_Mur2 LINE L1 895 1385 -4492 4 953 4861 96 30 11 chr15 48253611 48254916 -55240058 + Lx2B LINE L1 781 1957 -1957 4 953 2342 229 18 18 chr15 48254970 48255459 -55239515 + RLTR17 LTR ERVK 203 691 -1 4 953 1021 228 69 78 chr15 48255461 48255976 -55238998 + RMER3D-int LTR ERVK 2 855 -1987 4 953 733 215 15 44 chr15 48255987 48256258 -55238716 + RMER3D-int LTR ERVK 1008 1225 -1617 4 953 5788 194 58 44 chr15 48256358 48257952 -55237022 + RMER3D-int LTR ERVK 1227 2842 0 4 953 1064 151 176 3 chr15 48257957 48258268 -55236706 + RLTR17 LTR ERVK 4 368 -324 4 953 273 99 14 40 chr15 48258268 48258342 -55236632 + (CAAA)n Simple_repeat Simple_repeat 3 74 0 4 953 844 85 19 56 chr15 48258342 48258504 -55236470 + MusHAL1 LINE L1 767 922 -1790 4 953 5216 212 96 19 chr15 48258533 48259770 -55235204 + Lx5 LINE L1 5671 7003 -47 4 953 206 178 22 0 chr15 48259781 48259826 -55235148 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 4 953 548 164 0 9 chr15 48260304 48260415 -55234559 + CT-rich Low_complexity Low_complexity 2 111 0 4 953 495 33 0 0 chr15 48260567 48260628 -55234346 + (TTTA)n Simple_repeat Simple_repeat 4 64 0 4 953 230 366 60 47 chr15 48260726 48260875 -55234099 + B3A SINE B2 2 152 -46 4 953 380 118 0 14 chr15 48260876 48260945 -55234029 + (CA)n Simple_repeat Simple_repeat 2 69 0 4 953 28 0 0 0 chr15 48262127 48262155 -55232819 + AT_rich Low_complexity Low_complexity 1 28 0 4 953 2456 123 31 0 chr15 48262282 48262564 -55232410 + Lx3A LINE L1 6585 6871 -110 4 953 363 23 0 0 chr15 48262564 48262608 -55232366 + (TGG)n Simple_repeat Simple_repeat 2 45 0 4 953 2456 123 31 0 chr15 48262608 48262706 -55232268 + Lx3A LINE L1 6872 6976 -5 4 953 460 296 98 12 chr15 48262804 48262968 -55232006 + B3 SINE B2 2 179 -37 4 953 21 89 0 0 chr15 48264086 48264142 -55230832 + AT_rich Low_complexity Low_complexity 1 56 0 4 953 289 263 67 8 chr15 48264603 48264722 -55230252 + Lx9 LINE L1 7315 7440 -204 4 953 29 28 0 0 chr15 48264811 48264847 -55230127 + AT_rich Low_complexity Low_complexity 1 36 0 4 953 983 200 55 0 chr15 48264847 48265067 -55229907 + Lx9 LINE L1 7234 7465 -179 4 953 23 86 0 0 chr15 48265068 48265126 -55229848 + AT_rich Low_complexity Low_complexity 1 58 0 4 953 30 69 0 0 chr15 48265252 48265310 -55229664 + AT_rich Low_complexity Low_complexity 1 58 0 4 953 27 29 0 0 chr15 48265407 48265441 -55229533 + AT_rich Low_complexity Low_complexity 1 34 0 4 953 3634 153 13 3 chr15 48265783 48266414 -55228560 - L1_Mur2 LINE L1 -1361 4516 3880 4 953 8164 152 37 14 chr15 48266412 48267931 -55227043 + Lx2B LINE L1 5448 6999 -1 4 953 357 319 35 89 chr15 48267981 48268181 -55226793 + B4A SINE B4 10 211 -81 4 953 312 119 0 0 chr15 48268299 48268358 -55226616 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 953 21 0 0 0 chr15 48268430 48268451 -55226523 + AT_rich Low_complexity Low_complexity 1 21 0 4 953 294 315 26 18 chr15 48269632 48269745 -55225229 + Tigger7 DNA MER2_type 1 114 -2377 4 953 30 0 0 0 chr15 48269763 48269793 -55225181 + AT_rich Low_complexity Low_complexity 1 30 0 4 953 278 277 154 6 chr15 48270168 48270324 -55224650 - MER2 DNA MER2_type -77 268 90 4 953 230 259 35 0 chr15 48270418 48270476 -55224498 + Tigger7 DNA MER2_type 2402 2461 -30 4 953 1101 165 20 37 chr15 48270719 48270964 -55224010 + Lx2 LINE L1 6756 6996 -1 4 953 319 279 28 19 chr15 48272128 48272234 -55222740 - MTEb LTR MaLR 0 379 273 4 953 444 37 0 0 chr15 48272798 48272852 -55222122 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 953 536 267 77 25 chr15 48272942 48273138 -55221836 + B3 SINE B2 5 210 -6 4 953 180 256 72 60 chr15 48274126 48274209 -55220765 - L2 LINE L2 -1705 1714 1631 4 953 385 308 193 23 chr15 48274967 48275143 -55219831 + B3 SINE B2 1 206 -10 4 953 29 28 0 0 chr15 48276759 48276795 -55218179 + AT_rich Low_complexity Low_complexity 1 36 0 4 953 483 318 69 47 chr15 48276886 48277378 -55217596 - L1M2 LINE L1 -1095 5048 4546 4 953 28 29 0 0 chr15 48277392 48277427 -55217547 + AT_rich Low_complexity Low_complexity 1 35 0 4 953 210 71 0 0 chr15 48277618 48277646 -55217328 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 953 502 160 9 19 chr15 48277646 48277754 -55217220 + (TATATG)n Simple_repeat Simple_repeat 2 108 0 4 953 219 36 0 0 chr15 48277756 48277784 -55217190 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 953 259 323 21 0 chr15 48277834 48277927 -55217047 - Lx7 LINE L1 -397 7299 7205 4 953 2308 263 21 4 chr15 48278028 48278562 -55216412 - Lx6 LINE L1 -179 7281 6739 4 953 824 327 98 29 chr15 48278629 48278834 -55216140 - Lx5 LINE L1 -99 6951 6726 4 953 447 19 0 0 chr15 48278834 48278886 -55216088 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 953 824 327 98 29 chr15 48278886 48279089 -55215885 - Lx5 LINE L1 -325 6725 6515 4 953 461 322 92 33 chr15 48279132 48279490 -55215484 - Lx5 LINE L1 -687 6363 5960 4 953 365 213 0 0 chr15 48279489 48279564 -55215410 - L1_Mur3 LINE L1 -1083 4797 4723 4 953 2055 247 31 25 chr15 48279568 48280140 -55214834 - Lx6 LINE L1 -714 6746 6171 4 953 302 252 93 25 chr15 48280177 48280295 -55214679 + L1M2 LINE L1 4396 4521 -1622 4 953 2899 49 0 21 chr15 48280315 48280688 -55214286 + RLTR10B2 LTR ERVK 1 365 0 4 953 16360 124 24 24 chr15 48280715 48284707 -55210267 + Lx3A LINE L1 3131 6971 -10 4 953 3385 244 63 47 chr15 48284705 48284959 -55210015 + L1_Mur3 LINE L1 4355 4636 -1244 4 953 669 82 0 0 chr15 48284959 48285056 -55209918 + (CA)n Simple_repeat Simple_repeat 1 97 0 4 953 3385 249 61 49 chr15 48285056 48285977 -55208997 + L1_Mur3 LINE L1 4637 5574 -2421 4 953 21 36 0 0 chr15 48286567 48286595 -55208379 + AT_rich Low_complexity Low_complexity 1 28 0 4 953 833 109 7 14 chr15 48286640 48286780 -55208194 - L1Md_F2 LINE L1 -3 6579 6441 4 953 24 32 0 0 chr15 48289302 48289333 -55205641 + AT_rich Low_complexity Low_complexity 1 31 0 4 953 1398 85 35 0 chr15 48289742 48289943 -55205031 - L1_Mus1 LINE L1 0 6567 6360 4 953 197 254 14 0 chr15 48290022 48290093 -55204881 + (TA)n Simple_repeat Simple_repeat 1 72 0 4 953 257 234 13 0 chr15 48290756 48290833 -55204141 - Lx9 LINE L1 -3 7641 7564 4 953 215 182 23 0 chr15 48291310 48291354 -55203620 + (TAA)n Simple_repeat Simple_repeat 2 46 0 4 953 207 0 0 0 chr15 48292123 48292146 -55202828 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 4 953 26 82 0 0 chr15 48292732 48292793 -55202181 + AT_rich Low_complexity Low_complexity 1 61 0 4 953 384 288 127 10 chr15 48293986 48294207 -55200767 + MLT1-int LTR MaLR 80 324 -1047 4 953 1102 266 51 25 chr15 48294214 48294607 -55200367 + Lx9 LINE L1 4704 5106 -741 4 953 1913 240 40 9 chr15 48294611 48294862 -55200112 + Lx9 LINE L1 5275 5530 -317 4 953 203 79 0 26 chr15 48294862 48294901 -55200073 + (TAA)n Simple_repeat Simple_repeat 2 39 0 4 953 1913 245 45 19 chr15 48294901 48295373 -55199601 + Lx9 LINE L1 5531 6045 -1599 4 953 3136 281 67 24 chr15 48295493 48296633 -55198341 + Lx9 LINE L1 6310 7498 -146 4 953 415 329 14 0 chr15 48296646 48296786 -55198188 + Lx8 LINE L1 6430 6571 -902 4 953 627 213 41 8 chr15 48296787 48296910 -55198064 + ETnERV2-int LTR ERVK 7070 7196 -210 4 953 24 0 0 0 chr15 48297752 48297776 -55197198 + AT_rich Low_complexity Low_complexity 1 24 0 4 953 412 383 37 67 chr15 48299299 48299596 -55195378 + B4A SINE B4 3 290 -2 4 953 1146 68 0 0 chr15 48300127 48300274 -55194700 + B1_Mus2 SINE Alu 1 147 0 4 953 495 229 22 35 chr15 48300421 48300585 -55194389 - Lx2 LINE L1 0 6997 6834 4 953 1611 252 139 13 chr15 48301985 48302459 -55192515 + Lx6 LINE L1 6912 7445 -15 4 953 293 410 29 15 chr15 48303132 48303474 -55191500 + MLT1D LTR MaLR 156 502 -3 4 953 1190 117 0 46 chr15 48303850 48304047 -55190927 - B2_Mm2 SINE B2 -4 191 4 4 953 331 385 43 21 chr15 48304152 48304338 -55190636 + MER58A DNA MER1_type 20 209 -15 4 953 1319 117 51 0 chr15 48304402 48304598 -55190376 + RLTR10D LTR ERVK 1 206 -153 4 953 808 104 160 57 chr15 48304598 48304776 -55190198 + IAP-d-int LTR ERVK 1 177 -6365 4 953 805 210 0 0 chr15 48304770 48304927 -55190047 + IAP-d-int LTR ERVK 347 503 -6039 4 953 2046 198 0 16 chr15 48304927 48305311 -55189663 + IAP-d-int LTR ERVK 5007 5384 -1158 4 953 5792 110 7 35 chr15 48305293 48306186 -55188788 + IAP-d-int LTR ERVK 5673 6540 -2 4 953 2362 87 33 52 chr15 48306188 48306552 -55188422 + RLTR10D LTR ERVK 1 357 -2 4 953 1247 347 48 15 chr15 48307970 48308579 -55186395 + Lx8 LINE L1 6727 7355 -118 4 953 620 318 55 5 chr15 48308579 48308778 -55186196 + B3 SINE B2 8 216 0 4 953 594 316 141 14 chr15 48309495 48309843 -55185131 + Lx7 LINE L1 6898 7289 -407 4 953 450 0 0 0 chr15 48310005 48310055 -55184919 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 4 953 605 248 152 45 chr15 48310708 48311038 -55183936 + RLTR9A LTR ERVK 4 368 0 5 953 651 65 0 0 chr15 48311540 48311633 -55183341 + (GA)n Simple_repeat Simple_repeat 2 94 0 5 953 1893 137 126 58 chr15 48311638 48312050 -55182924 + RMER16-int LTR ERVK 231 670 -4736 5 953 3826 194 13 15 chr15 48312054 48312808 -55182166 + RMER16-int LTR ERVK 816 1568 -3838 5 953 338 298 0 0 chr15 48312971 48313055 -55181919 + RMER16-int LTR ERVK 1500 1583 -1731 5 953 902 301 66 57 chr15 48313121 48313681 -55181293 + RMER16-int LTR ERVK 1791 2355 -3812 5 953 2632 172 29 19 chr15 48313719 48314246 -55180728 + RMER16-int LTR ERVK 1566 2081 -3325 5 953 402 21 0 0 chr15 48314266 48314313 -55180661 + (TTG)n Simple_repeat Simple_repeat 2 48 0 5 953 1026 96 0 0 chr15 48314314 48314450 -55180524 - B1_Mus1 SINE Alu -11 137 2 5 953 6272 144 61 5 chr15 48314451 48314772 -55180202 + RMER16-int LTR ERVK 2156 2502 -2904 5 953 378 0 0 0 chr15 48314772 48314814 -55180160 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 5 953 5977 64 5 8 chr15 48314818 48315606 -55179368 - L1Md_F2 LINE L1 -16 6566 5781 5 953 6272 144 61 5 chr15 48315606 48316355 -55178619 + RMER16-int LTR ERVK 2503 3284 -2122 5 953 673 150 188 18 chr15 48316339 48316484 -55178490 + RMER16-int LTR ERVK 3502 3656 -1750 5 953 180 0 0 0 chr15 48316484 48316504 -55178470 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5 953 673 150 188 18 chr15 48316504 48316528 -55178446 + RMER16-int LTR ERVK 3657 3699 -1707 5 953 261 343 0 0 chr15 48316590 48316695 -55178279 + MuRRS4-int LTR ERV1 4493 4597 -466 5 953 565 283 57 116 chr15 48316938 48317326 -55177648 + RLTR9A LTR ERVK 4 368 0 5 953 256 354 105 75 chr15 48317346 48317612 -55177362 + B4 SINE B4 3 276 -16 5 953 395 129 0 38 chr15 48318513 48318618 -55176356 + A-rich Low_complexity Low_complexity 1 101 0 5 953 212 344 51 51 chr15 48319655 48319753 -55175221 - L2c LINE L2 0 3387 3290 5 953 1129 249 135 28 chr15 48320926 48321290 -55173684 + MTD LTR MaLR 3 405 -14 5 953 276 245 27 9 chr15 48322638 48322749 -55172225 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 5 953 333 0 0 0 chr15 48322807 48322844 -55172130 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 953 728 312 48 62 chr15 48322868 48323240 -55171734 - RMER5 LTR ERV1 -15 519 153 5 953 312 153 29 39 chr15 48323916 48324018 -55170956 - Lx2B LINE L1 -6 6994 6894 5 953 1089 263 9 60 chr15 48324241 48324557 -55170417 + ORR1D1 LTR MaLR 1 300 -74 5 953 10716 60 7 0 chr15 48324559 48325936 -55169038 + L1Md_F2 LINE L1 4199 5585 -298 5 953 7830 38 0 65 chr15 48325937 48326990 -55167984 + L1Md_F2 LINE L1 5587 6570 -12 5 953 226 0 59 0 chr15 48327551 48327585 -55167389 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 5 953 1061 68 7 26 chr15 48327586 48327737 -55167237 - B1_Mus1 SINE Alu 0 148 1 5 953 180 0 0 0 chr15 48328736 48328756 -55166218 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 5 953 265 333 181 0 chr15 48328867 48329005 -55165969 + MLT1E1A LTR MaLR 94 256 -424 5 953 341 87 0 0 chr15 48329213 48329259 -55165715 - L1_Mus1 LINE L1 -401 6166 6121 5 953 3015 84 2 2 chr15 48329261 48329677 -55165297 + L1_Mus1 LINE L1 6151 6566 -1 5 953 21 0 0 0 chr15 48330171 48330192 -55164782 + AT_rich Low_complexity Low_complexity 1 21 0 5 953 21 36 0 0 chr15 48330304 48330332 -55164642 + AT_rich Low_complexity Low_complexity 1 28 0 5 953 394 239 68 8 chr15 48330833 48330951 -55164023 + BC1_Mm scRNA scRNA 8 132 -20 5 953 181 339 0 16 chr15 48331433 48331496 -55163478 - L2c LINE L2 0 3387 3326 5 953 945 210 110 17 chr15 48333465 48333765 -55161209 - Lx9 LINE L1 -2 7642 7315 5 953 438 314 68 45 chr15 48333994 48334258 -55160716 + LTR40c LTR ERVL 187 456 -9 5 953 21 0 0 0 chr15 48335006 48335027 -55159947 + AT_rich Low_complexity Low_complexity 1 21 0 5 953 207 114 0 0 chr15 48335478 48335513 -55159461 + (TA)n Simple_repeat Simple_repeat 1 35 0 5 953 225 94 0 0 chr15 48335714 48335746 -55159228 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 5 953 3854 143 8 17 chr15 48335751 48336386 -55158588 - Lx2 LINE L1 -3 6994 6366 5 953 1950 97 38 3 chr15 48336386 48336675 -55158299 - Lx3A LINE L1 -140 6841 6543 5 953 1481 124 4 16 chr15 48336664 48336910 -55158064 + L1_Mur1 LINE L1 4692 4934 -952 5 953 17269 142 69 28 chr15 48336905 48338087 -55156887 + L1VL2 LINE L1 393 1580 -4303 5 953 492 18 0 0 chr15 48338087 48338144 -55156830 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 953 17269 159 194 12 chr15 48338144 48341665 -55153309 + L1VL2 LINE L1 1581 5804 -79 5 953 2960 112 12 45 chr15 48341669 48342156 -55152818 + L1_Mus3 LINE L1 6161 6631 -7 5 953 4466 207 20 50 chr15 48342290 48343563 -55151411 - L1_Mur3 LINE L1 -3436 2444 1211 5 953 1923 144 19 0 chr15 48343569 48343881 -55151093 - ORR1A3 LTR MaLR -8 318 1 5 953 1104 258 54 6 chr15 48343883 48344218 -55150756 - L1_Mur3 LINE L1 -6517 1211 861 5 953 1027 299 46 23 chr15 48344243 48344637 -55150337 - L1_Mur3 LINE L1 -7198 530 128 5 953 35432 42 1 3 chr15 48345124 48350245 -55144729 + L1Md_T LINE L1 387 5589 -297 5 953 8122 38 14 2 chr15 48350245 48351229 -55143745 + L1Md_T LINE L1 5590 6585 0 5 953 21 0 0 0 chr15 48351298 48351319 -55143655 + AT_rich Low_complexity Low_complexity 1 21 0 5 953 252 86 0 0 chr15 48351403 48351438 -55143536 + (CAA)n Simple_repeat Simple_repeat 1 35 0 5 953 6047 122 31 20 chr15 48351547 48353147 -55141827 - Lx3A LINE L1 -447 6534 4918 5 953 6480 127 18 37 chr15 48353145 48354221 -55140753 - Lx LINE L1 0 6654 5600 5 953 1345 233 68 64 chr15 48354248 48354761 -55140213 + RLTR31_Mur LTR ERVK 39 553 0 5 953 12473 195 76 22 chr15 48354790 48357910 -55137064 + Lx6 LINE L1 2463 5750 -130 5 953 2713 263 118 52 chr15 48358516 48359134 -55135840 + Lx6 LINE L1 5782 6410 -1050 5 953 333 0 0 0 chr15 48359134 48359171 -55135803 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 953 2713 263 118 52 chr15 48359171 48359789 -55135185 + Lx6 LINE L1 6411 7099 -361 5 953 296 292 0 55 chr15 48359787 48359932 -55135042 + Lx7 LINE L1 7405 7541 -155 5 953 219 336 135 0 chr15 48361467 48361571 -55133403 + MIR SINE MIR 16 133 -129 5 953 236 274 0 16 chr15 48361685 48361748 -55133226 + B4A SINE B4 4 65 -227 5 953 2336 126 139 19 chr15 48361784 48362214 -55132760 + RLTR45 LTR ERVK 1 482 0 5 953 24 32 0 0 chr15 48362531 48362562 -55132412 + AT_rich Low_complexity Low_complexity 1 31 0 5 953 3159 293 79 20 chr15 48363781 48364761 -55130213 + Lx5 LINE L1 6003 7039 -11 5 953 832 64 0 0 chr15 48364904 48365014 -55129960 - L1_Mus3 LINE L1 -312 6326 6217 5 953 1748 143 7 7 chr15 48365015 48365372 -55129602 + L1_Mus3 LINE L1 6336 6638 0 5 953 225 317 47 19 chr15 48365375 48365481 -55129493 + RMER12 LTR ERVK 742 850 -472 5 954 1209 126 5 37 chr15 48365639 48365854 -55129120 - Lx2 LINE L1 0 6997 6790 5 954 413 334 62 79 chr15 48367926 48368280 -55126694 + L2c LINE L2 3040 3387 0 5 954 478 290 113 22 chr15 48369195 48369417 -55125557 + LTR40a LTR ERVL 7 248 -271 5 954 207 0 0 0 chr15 48369955 48369978 -55124996 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5 954 584 310 35 56 chr15 48370095 48370382 -55124592 - Lx8 LINE L1 -664 6809 6529 5 954 653 311 97 19 chr15 48370357 48370718 -55124256 + Lx8 LINE L1 6898 7286 -187 5 954 410 178 11 0 chr15 48370803 48370893 -55124081 + (TA)n Simple_repeat Simple_repeat 1 91 0 5 954 22 0 0 0 chr15 48371574 48371596 -55123378 + AT_rich Low_complexity Low_complexity 1 22 0 5 954 252 59 0 0 chr15 48371623 48371657 -55123317 + (TA)n Simple_repeat Simple_repeat 1 34 0 5 954 192 77 0 0 chr15 48371657 48371683 -55123291 + (GA)n Simple_repeat Simple_repeat 1 26 0 5 954 35 41 0 0 chr15 48371959 48372008 -55122966 + AT_rich Low_complexity Low_complexity 1 49 0 5 954 198 0 0 0 chr15 48372652 48372674 -55122300 + (TA)n Simple_repeat Simple_repeat 2 23 0 5 954 209 197 15 0 chr15 48373179 48373245 -55121729 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 954 350 343 16 79 chr15 48373995 48374185 -55120789 + B4A SINE B4 3 180 -112 5 954 675 94 0 0 chr15 48374197 48374293 -55120681 + (GA)n Simple_repeat Simple_repeat 2 97 0 5 954 615 51 0 0 chr15 48375202 48375281 -55119693 + (TG)n Simple_repeat Simple_repeat 2 80 0 5 954 360 388 57 11 chr15 48375298 48375577 -55119397 - B4A SINE B4 0 292 1 5 954 662 118 16 32 chr15 48375997 48376120 -55118854 + Lx2A LINE L1 6883 7003 -5 5 954 281 352 26 17 chr15 48376884 48377064 -55117910 - MIRb SINE MIR -52 216 34 5 954 351 0 0 0 chr15 48377662 48377701 -55117273 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 954 603 40 0 0 chr15 48377826 48377900 -55117074 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 5 954 23 0 0 0 chr15 48379286 48379309 -55115665 + AT_rich Low_complexity Low_complexity 1 23 0 5 954 833 246 38 0 chr15 48379332 48379515 -55115459 + B3 SINE B2 27 216 0 5 954 26 30 0 0 chr15 48379692 48379725 -55115249 + AT_rich Low_complexity Low_complexity 1 33 0 5 954 332 174 0 11 chr15 48380335 48380428 -55114546 + (TG)n Simple_repeat Simple_repeat 1 92 0 5 954 437 382 5 39 chr15 48380428 48380635 -55114339 - B3 SINE B2 -13 203 4 5 954 788 309 106 22 chr15 48381392 48381749 -55113225 - MTD LTR MaLR -15 404 18 5 954 285 346 91 52 chr15 48382012 48382320 -55112654 - MLT1J-int LTR MaLR -441 946 627 5 954 379 86 0 0 chr15 48382635 48382646 -55112328 + U2 snRNA snRNA 2 12 -176 5 954 1225 138 9 9 chr15 48382646 48382866 -55112108 - Lx LINE L1 -2 6652 6433 5 954 379 86 0 0 chr15 48382866 48382912 -55112062 + U2 snRNA snRNA 13 58 -130 5 954 1037 302 76 26 chr15 48383175 48383556 -55111418 - MTD LTR MaLR -9 410 11 5 954 204 40 0 0 chr15 48384013 48384038 -55110936 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 954 750 299 57 43 chr15 48384247 48384527 -55110447 - B4 SINE B4 -8 284 1 5 954 387 0 0 0 chr15 48384569 48384612 -55110362 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 954 11113 31 14 0 chr15 48386198 48388136 -55106838 - L1Md_T LINE L1 0 6582 4606 5 954 323 203 62 0 chr15 48388404 48388468 -55106506 - Lx8 LINE L1 -782 6691 6624 5 954 33 0 0 0 chr15 48388621 48388654 -55106320 + AT_rich Low_complexity Low_complexity 1 33 0 5 954 231 358 65 34 chr15 48388773 48389189 -55105785 - L1MA7 LINE L1 -49 6242 5814 5 954 495 141 0 0 chr15 48389171 48389249 -55105725 - L1_Mus4 LINE L1 -660 5976 5899 5 954 3572 99 21 2 chr15 48389249 48389767 -55105207 + L1_Mus4 LINE L1 6108 6635 -1 5 954 313 289 78 25 chr15 48389800 48390090 -55104884 - L1MA7 LINE L1 -476 5824 5514 5 954 25 0 0 0 chr15 48390124 48390149 -55104825 + AT_rich Low_complexity Low_complexity 1 25 0 5 954 285 364 49 8 chr15 48391292 48391414 -55103560 - B1F SINE Alu -17 132 6 5 954 5239 79 35 0 chr15 48391708 48392557 -55102417 - L1_Mus1 LINE L1 -7 6631 5653 5 954 505 314 107 4 chr15 48392539 48392782 -55102192 + L1MC1 LINE L1 6002 6269 -64 5 954 939 194 255 19 chr15 48392798 48393166 -55101808 + Lx2B LINE L1 6343 6797 -203 6 954 1946 219 85 50 chr15 48393179 48393780 -55101194 - RMER13B LTR ERVK -9 899 278 6 954 1797 178 24 78 chr15 48393805 48394269 -55100705 - RMER17B LTR ERVK -519 439 1 6 954 337 273 92 18 chr15 48394270 48394434 -55100540 + Lx3C LINE L1 6797 6972 -4 6 954 2240 284 88 66 chr15 48395563 48396605 -55098369 - Lx6 LINE L1 -11 7449 6385 6 954 348 24 0 0 chr15 48396628 48396669 -55098305 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 954 207 0 0 0 chr15 48396758 48396781 -55098193 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 954 215 31 31 0 chr15 48396825 48396857 -55098117 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 6 954 1046 90 7 7 chr15 48396862 48397008 -55097966 - B1_Mus1 SINE Alu -1 147 2 6 954 2074 121 57 0 chr15 48397335 48397666 -55097308 + L1_Mus4 LINE L1 6286 6635 -1 6 954 999 25 0 0 chr15 48397861 48397979 -55096995 + (TC)n Simple_repeat Simple_repeat 1 118 0 6 954 2733 54 6 0 chr15 48398819 48399169 -55095805 - L1Md_F2 LINE L1 -12 6570 6219 6 954 438 320 34 0 chr15 48399389 48399536 -55095438 + L2 LINE L2 2335 2486 -933 6 954 24 0 0 0 chr15 48400927 48400951 -55094023 + AT_rich Low_complexity Low_complexity 1 24 0 6 954 333 0 0 0 chr15 48401794 48401831 -55093143 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 6 954 3468 204 87 16 chr15 48402990 48403784 -55091190 + RLTR25B LTR ERVK 4 853 -175 6 954 609 220 146 41 chr15 48404050 48404151 -55090823 + RLTR25B LTR ERVK 757 884 -144 6 954 459 0 0 0 chr15 48404151 48404202 -55090772 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 954 396 0 0 0 chr15 48404207 48404251 -55090723 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 954 366 42 0 0 chr15 48404254 48404302 -55090672 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 954 609 220 146 41 chr15 48404302 48404436 -55090538 + RLTR25B LTR ERVK 890 1025 -3 6 954 1221 314 119 8 chr15 48405737 48406348 -55088626 - Lx8 LINE L1 -154 7319 6641 6 954 225 0 0 0 chr15 48408847 48408872 -55086102 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 6 954 456 302 46 59 chr15 48409332 48409571 -55085403 + L1MA6 LINE L1 4313 4548 -1595 6 954 366 23 0 0 chr15 48409734 48409777 -55085197 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 6 954 295 280 125 40 chr15 48409986 48410258 -55084716 + L1MA6 LINE L1 4736 5030 -1113 6 954 265 61 0 0 chr15 48410370 48410403 -55084571 - U2 snRNA snRNA -155 33 1 6 954 378 204 0 0 chr15 48410510 48410603 -55084371 + (CA)n Simple_repeat Simple_repeat 2 94 0 6 954 955 373 63 10 chr15 48410865 48411472 -55083502 + Lx8 LINE L1 6654 7292 -181 6 954 360 0 0 0 chr15 48411618 48411658 -55083316 + (GA)n Simple_repeat Simple_repeat 2 41 0 6 954 310 284 146 41 chr15 48411663 48411979 -55082995 + L1MA6 LINE L1 5914 6262 -38 6 954 302 391 23 0 chr15 48413467 48413600 -55081374 + L1MEc LINE L1 74 209 -6191 6 954 1150 57 0 0 chr15 48413688 48413828 -55081146 + B1_Mus1 SINE Alu 3 142 -6 6 954 1496 41 0 12 chr15 48413829 48414078 -55080896 + (GAAA)n Simple_repeat Simple_repeat 1 246 0 6 954 23 54 0 0 chr15 48414750 48414787 -55080187 + AT_rich Low_complexity Low_complexity 1 37 0 6 954 743 276 72 0 chr15 48414909 48415090 -55079884 + B3 SINE B2 1 194 -22 6 954 258 32 0 0 chr15 48415090 48415121 -55079853 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 6 954 529 198 244 19 chr15 48415377 48415409 -55079565 - Lx4A LINE L1 -8 7050 7001 6 954 444 19 0 0 chr15 48415409 48415462 -55079512 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 954 529 198 244 19 chr15 48415462 48415531 -55079443 - Lx4A LINE L1 -58 7000 6932 6 954 243 0 0 0 chr15 48415531 48415558 -55079416 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 954 529 198 244 19 chr15 48415558 48415615 -55079359 - Lx4A LINE L1 -127 6931 6856 6 954 732 180 216 26 chr15 48415934 48416128 -55078846 - Lx4A LINE L1 -179 6879 6649 6 954 225 0 0 0 chr15 48416131 48416156 -55078818 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 6 954 414 53 0 0 chr15 48416394 48416451 -55078523 + (GTTTG)n Simple_repeat Simple_repeat 3 59 0 6 954 222 62 0 0 chr15 48417110 48417142 -55077832 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 954 357 171 0 0 chr15 48417201 48417289 -55077685 + (TG)n Simple_repeat Simple_repeat 2 89 0 6 954 583 306 133 70 chr15 48417295 48417692 -55077282 - Lx8 LINE L1 -5 7468 7047 6 954 191 335 57 36 chr15 48418004 48418196 -55076778 + MIR SINE MIR 64 259 -3 6 954 242 325 0 0 chr15 48418344 48418424 -55076550 + (TATG)n Simple_repeat Simple_repeat 4 83 0 6 954 898 306 51 14 chr15 48418432 48418707 -55076267 - B4A SINE B4 -5 287 3 6 954 795 137 16 8 chr15 48418964 48419089 -55075885 - MTC LTR MaLR -8 413 288 6 954 459 186 103 0 chr15 48419085 48419182 -55075792 - MTC LTR MaLR -314 107 1 6 954 466 271 0 0 chr15 48419743 48419839 -55075135 + ORR1E LTR MaLR 1 96 -263 6 954 784 171 69 36 chr15 48420079 48420275 -55074699 + Lx3B LINE L1 6790 6999 -10 6 954 432 221 0 26 chr15 48421021 48421256 -55073718 + (TG)n Simple_repeat Simple_repeat 1 228 0 6 954 569 267 68 19 chr15 48422607 48422813 -55072161 + B3 SINE B2 1 216 0 6 954 441 36 0 0 chr15 48422934 48422989 -55071985 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 954 315 214 18 0 chr15 48423059 48423115 -55071859 + Lx7 LINE L1 6460 6516 -1180 6 954 465 19 0 0 chr15 48423268 48423322 -55071652 + (TC)n Simple_repeat Simple_repeat 2 55 0 6 954 195 42 0 0 chr15 48423481 48423505 -55071469 + (A)n Simple_repeat Simple_repeat 1 24 0 6 954 5079 62 36 0 chr15 48424174 48424836 -55070138 - L1Md_F2 LINE L1 0 6582 5897 6 954 220 333 9 37 chr15 48425701 48425810 -55069164 + MIR3 SINE MIR 101 206 -2 6 954 21 95 0 0 chr15 48426254 48426317 -55068657 + AT_rich Low_complexity Low_complexity 1 63 0 6 954 24 0 0 0 chr15 48426497 48426521 -55068453 + AT_rich Low_complexity Low_complexity 1 24 0 6 954 417 297 62 62 chr15 48426922 48427179 -55067795 - MTE2a LTR MaLR -154 225 1 6 954 278 341 64 14 chr15 48427181 48427321 -55067653 - MTE2a-int LTR MaLR -3 1577 1431 6 954 419 193 42 12 chr15 48427326 48427573 -55067401 + (TA)n Simple_repeat Simple_repeat 1 254 0 6 954 250 346 103 87 chr15 48427750 48427811 -55067163 - MTE2a-int LTR MaLR -237 1021 965 6 954 201 74 0 0 chr15 48427811 48427838 -55067136 + (CAA)n Simple_repeat Simple_repeat 2 28 0 6 954 393 327 59 95 chr15 48427838 48428399 -55066575 - MTE2a-int LTR MaLR -279 1091 232 6 954 4778 68 35 0 chr15 48428464 48429083 -55065891 - L1_Mus2 LINE L1 -250 6316 5676 6 954 545 307 57 21 chr15 48429083 48429276 -55065698 - MTE2a-int LTR MaLR -1058 200 1 6 954 2108 80 0 0 chr15 48429437 48429713 -55065261 - L1_Mus1 LINE L1 0 6567 6292 6 954 943 26 0 0 chr15 48429713 48429826 -55065148 + L1_Mus4 LINE L1 5680 5792 -844 6 954 476 279 78 166 chr15 48429826 48430122 -55064852 - MTD LTR MaLR -95 284 15 6 954 542 241 28 28 chr15 48430122 48430263 -55064711 + Lx7 LINE L1 7197 7337 -359 6 954 427 296 12 6 chr15 48430307 48430477 -55064497 + (TA)n Simple_repeat Simple_repeat 2 172 0 6 954 1207 226 6 44 chr15 48430490 48430832 -55064142 + Lx7 LINE L1 7367 7695 -1 6 954 777 18 0 18 chr15 48430963 48431077 -55063897 + L1Md_T LINE L1 6470 6581 -1 6 954 341 406 6 12 chr15 48432443 48432615 -55062359 - LTR40a LTR ERVL -348 171 1 6 954 616 291 20 0 chr15 48432641 48432837 -55062137 - HERVL40-int LTR ERVL -26 5504 5305 6 954 511 15 0 29 chr15 48433198 48433268 -55061706 + (TAGA)n Simple_repeat Simple_repeat 3 70 0 6 954 295 120 0 57 chr15 48433423 48433436 -55061538 - B1_Mm SINE Alu 0 147 137 6 954 243 0 0 0 chr15 48433436 48433463 -55061511 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 6 954 295 147 14 51 chr15 48433463 48433524 -55061450 - B1_Mm SINE Alu -11 136 46 6 954 1123 76 0 0 chr15 48434192 48434336 -55060638 - Lx3A LINE L1 -144 6837 6694 6 954 3395 167 35 14 chr15 48434860 48435481 -55059493 - Lx3C LINE L1 -2 6974 6341 6 954 51 45 0 11 chr15 48435508 48435558 -55059416 + AT_rich Low_complexity Low_complexity 1 50 0 6 954 1142 95 0 0 chr15 48435558 48435705 -55059269 - B1_Mus2 SINE Alu 0 147 1 6 954 51 45 0 11 chr15 48435705 48435744 -55059230 + AT_rich Low_complexity Low_complexity 1 39 0 6 954 1165 92 202 0 chr15 48435744 48435848 -55059126 - Lx3_Mus LINE L1 -8 7001 6857 6 954 242 0 121 0 chr15 48435848 48435906 -55059068 + (CCA)n Simple_repeat Simple_repeat 2 66 0 6 954 1165 92 202 0 chr15 48435906 48436019 -55058955 - Lx3_Mus LINE L1 -153 6856 6741 6 954 594 262 8 16 chr15 48436113 48436241 -55058733 - RSINE1 SINE B4 -36 129 3 6 954 610 136 15 0 chr15 48436623 48436747 -55058227 + Lx4B LINE L1 6489 6615 -443 6 954 687 35 0 0 chr15 48436747 48436833 -55058141 + (TG)n Simple_repeat Simple_repeat 2 87 0 6 954 282 377 53 27 chr15 48436847 48436997 -55057977 - RSINE1 SINE B4 -10 155 2 6 954 292 314 0 65 chr15 48436998 48437195 -55057779 - L1_Mur3 LINE L1 -709 5588 5396 6 954 252 245 20 0 chr15 48437212 48437261 -55057713 - MurSatRep1 Unknown Unknown -1854 283 234 6 954 781 200 0 14 chr15 48437778 48437925 -55057049 + B1_Mur2 SINE Alu 4 148 -1 6 954 339 25 0 0 chr15 48438870 48438910 -55056064 + (GAAA)n Simple_repeat Simple_repeat 2 41 0 6 954 954 120 0 17 chr15 48439276 48439454 -55055520 + (GGGGA)n Simple_repeat Simple_repeat 2 176 0 6 954 557 271 73 34 chr15 48439872 48440078 -55054896 - B3 SINE B2 -2 214 1 6 954 517 296 32 16 chr15 48440168 48440357 -55054617 + Lx7 LINE L1 5765 5956 -1740 6 954 244 255 46 101 chr15 48440357 48440466 -55054508 - MER72B LTR ERV1 -56 712 610 6 954 672 327 4 12 chr15 48440466 48440714 -55054260 + Lx7 LINE L1 6069 6314 -1382 6 954 1022 344 31 31 chr15 48440711 48441233 -55053741 + Lx7 LINE L1 6431 6952 -744 6 954 477 306 86 37 chr15 48441873 48442060 -55052914 - B3A SINE B2 0 198 3 6 954 306 0 0 0 chr15 48442060 48442094 -55052880 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 954 180 375 93 39 chr15 48442308 48442566 -55052408 - L2 LINE L2 -1341 2078 1807 6 954 8566 144 27 6 chr15 48443290 48444689 -55050285 + Lx4A LINE L1 5615 7042 -16 6 954 387 0 0 0 chr15 48444689 48444732 -55050242 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 6 954 837 117 0 0 chr15 48445611 48445739 -55049235 + (GGAA)n Simple_repeat Simple_repeat 2 129 0 6 954 328 309 40 8 chr15 48445743 48445867 -55049107 - Lx6 LINE L1 -30 7430 7303 6 954 504 0 0 0 chr15 48446744 48446800 -55048174 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 6 954 5131 116 48 4 chr15 48446800 48447564 -55047410 - Lx LINE L1 -15 6639 5842 6 954 2351 152 7 17 chr15 48447564 48447971 -55047003 + Lx LINE L1 5421 5823 -60 6 954 630 248 47 69 chr15 48448959 48449236 -55045738 - Lx7 LINE L1 -52 7644 7374 7 954 21 0 0 0 chr15 48449256 48449277 -55045697 + AT_rich Low_complexity Low_complexity 1 21 0 7 954 832 297 211 53 chr15 48450176 48450703 -55044271 + Lx8 LINE L1 6864 7473 0 7 954 458 356 86 14 chr15 48451529 48451751 -55043223 + MLT1E2 LTR MaLR 372 609 -18 7 954 1093 109 0 0 chr15 48452303 48452450 -55042524 + B1_Mus1 SINE Alu 2 148 0 7 954 414 162 0 0 chr15 48452450 48452524 -55042450 + A-rich Low_complexity Low_complexity 1 74 0 7 954 406 179 21 0 chr15 48452664 48452759 -55042215 + GA-rich Low_complexity Low_complexity 3 99 0 7 954 32 26 0 0 chr15 48453351 48453390 -55041584 + AT_rich Low_complexity Low_complexity 1 39 0 7 954 695 327 83 65 chr15 48454086 48454625 -55040349 - Charlie1a DNA MER1_type -902 553 5 7 954 3105 221 93 36 chr15 48454653 48455023 -55039951 + RMER21B LTR ERV1 1 384 -458 7 954 627 14 0 0 chr15 48455023 48455095 -55039879 + (CA)n Simple_repeat Simple_repeat 2 73 0 7 954 3105 221 93 36 chr15 48455095 48455521 -55039453 + RMER21B LTR ERV1 385 842 0 7 954 29 28 0 0 chr15 48456052 48456088 -55038886 + AT_rich Low_complexity Low_complexity 1 36 0 7 954 288 327 145 6 chr15 48456289 48456627 -55038347 - L1ME3A LINE L1 -171 6002 5618 7 954 1186 267 113 40 chr15 48456708 48457187 -55037787 + Lx9 LINE L1 6787 7300 -344 7 954 510 189 0 0 chr15 48457203 48457309 -55037665 + (TA)n Simple_repeat Simple_repeat 2 107 0 7 954 249 225 46 113 chr15 48457311 48457377 -55037597 + Lx9 LINE L1 7458 7516 -128 7 954 334 57 0 36 chr15 48457377 48457432 -55037542 + (TA)n Simple_repeat Simple_repeat 1 53 0 7 954 249 225 46 113 chr15 48457432 48457560 -55037414 + Lx9 LINE L1 7517 7639 -5 7 954 620 369 95 19 chr15 48457754 48458132 -55036842 + MLT1D LTR MaLR 45 451 -54 7 954 5631 155 38 16 chr15 48458492 48459397 -55035577 - Lx2 LINE L1 0 6997 6067 7 954 1244 112 37 0 chr15 48459397 48459584 -55035390 - B2_Mm2 SINE B2 0 195 2 7 954 5631 155 38 16 chr15 48459584 48459742 -55035232 - Lx2 LINE L1 -931 6066 5911 7 954 1217 96 10 36 chr15 48459748 48459942 -55035032 - B2_Mm1t SINE B2 -3 190 2 7 954 948 239 49 0 chr15 48459978 48460162 -55034812 - B3 SINE B2 -15 201 9 7 954 1078 110 0 0 chr15 48460811 48460957 -55034017 + B1_Mus1 SINE Alu 1 146 -2 7 954 294 29 0 0 chr15 48460960 48460995 -55033979 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 7 954 446 371 20 24 chr15 48461018 48461272 -55033702 + Lx8 LINE L1 7040 7292 -181 7 954 533 167 7 0 chr15 48461313 48461463 -55033511 + GA-rich Low_complexity Low_complexity 2 152 0 7 954 480 18 0 0 chr15 48462147 48462204 -55032770 + (TA)n Simple_repeat Simple_repeat 1 57 0 7 954 25 31 0 0 chr15 48462713 48462745 -55032229 + AT_rich Low_complexity Low_complexity 1 32 0 7 954 1734 220 29 37 chr15 48462873 48463354 -55031620 + Lx6 LINE L1 4667 5143 -737 7 954 1189 199 21 12 chr15 48463354 48463595 -55031379 - ORR1A2 LTR MaLR -87 283 1 7 954 1852 266 113 17 chr15 48463633 48464323 -55030651 + Lx6 LINE L1 5720 6475 -985 7 954 489 311 9 1 chr15 48465302 48465447 -55029527 + MTE2a LTR MaLR 226 371 -8 7 954 612 357 57 21 chr15 48465455 48465787 -55029187 + MTE2a-int LTR MaLR 3 346 -1234 7 954 648 355 58 53 chr15 48465829 48466343 -55028631 + MTE2a-int LTR MaLR 543 1106 -474 7 954 2009 286 64 20 chr15 48466800 48467555 -55027419 + L1_Mur3 LINE L1 4918 5705 -175 7 954 21 0 0 0 chr15 48467808 48467829 -55027145 + AT_rich Low_complexity Low_complexity 1 21 0 7 954 3743 64 8 8 chr15 48468483 48468987 -55025987 + L1Md_F2 LINE L1 6095 6582 0 7 954 3743 64 8 8 chr15 48468987 48469013 -55025961 + L1Md_F2 LINE L1 6560 6582 0 7 954 9197 104 16 12 chr15 48469015 48470817 -55024157 + Lx3A LINE L1 5175 6979 -2 7 954 24 32 0 0 chr15 48470823 48470854 -55024120 + AT_rich Low_complexity Low_complexity 1 31 0 7 954 26 30 0 0 chr15 48471472 48471505 -55023469 + AT_rich Low_complexity Low_complexity 1 33 0 7 954 1368 52 0 0 chr15 48472048 48472221 -55022753 + (GAAA)n Simple_repeat Simple_repeat 1 173 0 7 954 900 0 0 0 chr15 48472221 48472321 -55022653 + (GGAAA)n Simple_repeat Simple_repeat 1 100 0 7 954 2709 115 28 12 chr15 48472643 48473067 -55021907 + Lx LINE L1 6221 6651 -3 7 954 1078 204 71 0 chr15 48473086 48473282 -55021692 + Lx6 LINE L1 6912 7121 -339 7 954 207 0 0 0 chr15 48473284 48473307 -55021667 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 954 3381 121 15 19 chr15 48473376 48473897 -55021077 - Lx LINE L1 -401 6253 5735 7 954 544 244 87 78 chr15 48473877 48474095 -55020879 + Lx6 LINE L1 7184 7602 -94 7 954 5115 150 21 31 chr15 48474095 48475039 -55019935 + Lx3B LINE L1 6034 6968 -5 7 954 25 51 0 0 chr15 48475049 48475088 -55019886 + AT_rich Low_complexity Low_complexity 1 39 0 7 954 195 42 0 0 chr15 48475105 48475129 -55019845 + (A)n Simple_repeat Simple_repeat 1 24 0 7 954 1273 20 0 0 chr15 48475395 48475542 -55019432 + B1_Mm SINE Alu 1 147 0 7 954 25 0 0 0 chr15 48475614 48475639 -55019335 + AT_rich Low_complexity Low_complexity 1 25 0 7 954 1022 135 5 46 chr15 48475975 48476169 -55018805 + Lx LINE L1 6457 6642 -12 7 954 22 0 0 0 chr15 48476792 48476814 -55018160 + AT_rich Low_complexity Low_complexity 1 22 0 7 954 218 233 0 11 chr15 48477476 48477563 -55017411 + (TA)n Simple_repeat Simple_repeat 1 86 0 7 954 950 241 183 29 chr15 48477596 48477908 -55017066 + ORR1D1 LTR MaLR 1 360 -14 7 954 495 0 0 0 chr15 48477970 48478025 -55016949 + (TTTTG)n Simple_repeat Simple_repeat 2 56 0 7 954 1000 47 78 0 chr15 48478030 48478159 -55016815 - B1_Mus1 SINE Alu -8 140 2 7 954 338 284 114 82 chr15 48478277 48478461 -55016513 - B3A SINE B2 0 198 9 7 954 213 365 0 0 chr15 48478616 48478668 -55016306 + ID4_ SINE ID 28 79 -4 7 954 28 29 0 0 chr15 48479063 48479098 -55015876 + AT_rich Low_complexity Low_complexity 1 35 0 7 954 244 259 57 65 chr15 48479687 48479811 -55015163 + Tigger6b DNA MER2_type 1270 1392 -205 7 954 1491 256 3 11 chr15 48480668 48481016 -55013958 - Lx6 LINE L1 -9 7451 7107 7 954 267 382 58 32 chr15 48481027 48481181 -55013793 - B3A SINE B2 -15 183 26 7 954 228 244 0 0 chr15 48481928 48481973 -55013001 + L1M5 LINE L1 5493 5537 -907 7 954 26 50 0 0 chr15 48482686 48482726 -55012248 + AT_rich Low_complexity Low_complexity 1 40 0 7 954 4644 110 8 7 chr15 48482903 48483606 -55011368 + L1_Mur1 LINE L1 5183 5886 0 7 954 3202 133 34 9 chr15 48483622 48484160 -55010814 + Lx3A LINE L1 6428 6978 -3 7 954 228 232 18 0 chr15 48484287 48484343 -55010631 + CT-rich Low_complexity Low_complexity 2 58 0 7 954 191 239 56 69 chr15 48484795 48484867 -55010107 + L3b LINE CR1 166 236 -246 7 954 21 0 0 0 chr15 48484875 48484896 -55010078 + AT_rich Low_complexity Low_complexity 1 21 0 7 954 1889 251 15 23 chr15 48485145 48485619 -55009355 + Lx9 LINE L1 6838 7307 -337 7 954 356 223 14 78 chr15 48485728 48485869 -55009105 - Lx4B LINE L1 -4 7054 6923 7 954 828 257 21 21 chr15 48486490 48486677 -55008297 + B3 SINE B2 1 187 -29 7 954 434 244 77 14 chr15 48486920 48487128 -55007846 - Lx9 LINE L1 -5 7639 7419 7 954 820 234 35 69 chr15 48487108 48487397 -55007577 - Lx9 LINE L1 -124 7520 7242 7 954 257 250 88 0 chr15 48487489 48487557 -55007417 - Lx9 LINE L1 -405 7239 7166 7 954 315 344 53 38 chr15 48487560 48487693 -55007281 - Lx8 LINE L1 -144 7329 7195 7 954 462 36 0 0 chr15 48487730 48487786 -55007188 + (TTTC)n Simple_repeat Simple_repeat 4 59 0 7 954 383 360 39 0 chr15 48487786 48487964 -55007010 + Lx8 LINE L1 6859 7043 -430 7 954 897 190 304 5 chr15 48488010 48488244 -55006730 - L1_Mur3 LINE L1 -1802 4078 3775 7 954 2372 199 65 121 chr15 48488252 48489177 -55005797 - L1_Mur3 LINE L1 -2404 3476 2604 7 954 2436 44 0 0 chr15 48489290 48489585 -55005389 - L1Md_T LINE L1 -1 6581 6287 7 954 5353 27 0 0 chr15 48489598 48490222 -55004752 + L1Md_T LINE L1 5587 6210 -372 7 954 929 348 25 16 chr15 48491028 48491542 -55003432 + L1_Mur3 LINE L1 44 562 -7166 7 954 12379 213 51 24 chr15 48491541 48492694 -55002280 + L1_Mur3 LINE L1 862 2059 -3821 7 954 248 111 22 0 chr15 48492694 48492739 -55002235 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 954 12379 211 51 28 chr15 48492739 48494186 -55000788 + L1_Mur3 LINE L1 2060 3550 -2330 7 954 1989 132 32 9 chr15 48494186 48494529 -55000445 + Lx2 LINE L1 6647 6997 0 7 954 12379 211 51 28 chr15 48494529 48494828 -55000146 + L1_Mur3 LINE L1 3551 3832 -2048 7 954 4031 135 31 0 chr15 48494828 48495466 -54999508 + Lx2 LINE L1 6327 6984 -13 7 954 12379 211 51 28 chr15 48495466 48496288 -54998686 + L1_Mur3 LINE L1 3833 4680 -1200 7 119 1849 220 110 0 chr15 48496286 48496704 -54998270 + Lx6 LINE L1 6194 6657 -803 7 955 994 168 21 21 chr15 48496709 48496898 -54998076 + L1_Mur3 LINE L1 4725 4913 -967 7 955 2596 242 56 106 chr15 48496897 48497541 -54997433 + Lx6 LINE L1 6661 7282 -178 7 955 411 21 0 0 chr15 48497541 48497589 -54997385 + (TTATA)n Simple_repeat Simple_repeat 4 51 0 7 955 2596 242 56 106 chr15 48497589 48497634 -54997340 + Lx6 LINE L1 7283 7314 -146 7 955 1360 99 16 0 chr15 48497634 48497826 -54997148 - B2_Mm2 SINE B2 0 195 1 7 955 2596 242 56 106 chr15 48497826 48497972 -54997002 + Lx6 LINE L1 7315 7455 -5 7 955 252 0 0 0 chr15 48498047 48498075 -54996899 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 7 955 24 53 0 0 chr15 48498219 48498257 -54996717 + AT_rich Low_complexity Low_complexity 1 38 0 7 955 240 86 0 0 chr15 48498319 48498354 -54996620 - L1_Mur1 LINE L1 -493 5393 5359 7 955 8344 29 0 0 chr15 48498351 48500000 -54994974 - L1Md_T LINE L1 0 6582 4934 7 955 29328 44 4 1 chr15 48500000 48504083 -54990891 - L1Md_Gf LINE L1 -950 4936 745 1 955 2180 42 0 0 chr15 48504083 48504347 -54990627 + L1Md_A LINE L1 6319 6582 0 2 955 340 283 41 52 chr15 48504351 48504448 -54990526 + B3 SINE B2 118 213 -3 3 955 204 125 0 0 chr15 48505762 48505794 -54989180 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 955 23 86 0 0 chr15 48506842 48506900 -54988074 + AT_rich Low_complexity Low_complexity 1 58 0 5 955 24 0 0 0 chr15 48507013 48507037 -54987937 + AT_rich Low_complexity Low_complexity 1 24 0 6 955 5277 66 0 6 chr15 48507124 48507806 -54987168 - L1Md_F2 LINE L1 -12 6570 5893 7 955 351 0 0 0 chr15 48508476 48508515 -54986459 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 955 50 105 0 0 chr15 48509424 48509614 -54985360 + AT_rich Low_complexity Low_complexity 1 190 0 9 955 400 352 131 21 chr15 48510104 48510571 -54984403 + L1M4 LINE L1 478 995 -5547 1 955 6699 59 37 1 chr15 48511140 48512024 -54982950 + RLTR13D5 LTR ERVK 3 918 -105 1 955 25 0 0 0 chr15 48512465 48512490 -54982484 + AT_rich Low_complexity Low_complexity 1 25 0 1 955 1200 218 58 147 chr15 48513354 48513769 -54981205 - Lx5 LINE L1 -4 7046 6669 1 955 474 18 0 0 chr15 48514072 48514127 -54980847 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 955 370 225 9 9 chr15 48514154 48514266 -54980708 + Lx9 LINE L1 7533 7644 0 1 955 241 357 37 37 chr15 48515245 48515434 -54979540 - MIR SINE MIR -50 212 24 1 955 191 62 62 0 chr15 48515822 48515854 -54979120 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1 955 373 392 85 11 chr15 48515892 48516080 -54978894 - B4A SINE B4 -89 203 2 1 955 21 0 0 0 chr15 48517858 48517879 -54977095 + AT_rich Low_complexity Low_complexity 1 21 0 1 955 33397 70 2 5 chr15 48518194 48523348 -54971626 + L1Md_F3 LINE L1 452 5585 -298 2 955 8067 43 4 6 chr15 48523349 48524349 -54970625 + L1Md_F3 LINE L1 5587 6584 0 2 955 990 104 12 12 chr15 48524572 48524737 -54970237 + L1_Mus3 LINE L1 6470 6634 -4 2 955 27 73 0 0 chr15 48525205 48525260 -54969714 + AT_rich Low_complexity Low_complexity 1 55 0 2 955 226 345 25 50 chr15 48525675 48525794 -54969180 + MLT1H2 LTR MaLR 274 389 -100 2 955 493 209 43 38 chr15 48525839 48526023 -54968951 - Lx9 LINE L1 -2 7642 7458 2 955 832 193 35 40 chr15 48526035 48526262 -54968712 - Lx9 LINE L1 -127 7517 7292 2 955 400 259 16 49 chr15 48526255 48526377 -54968597 + Lx9 LINE L1 7124 7241 -403 2 955 22 35 0 0 chr15 48526682 48526711 -54968263 + AT_rich Low_complexity Low_complexity 1 29 0 2 955 3387 57 0 14 chr15 48526718 48527164 -54967810 + L1Md_F2 LINE L1 6131 6570 -12 2 955 268 297 86 38 chr15 48528147 48528252 -54966722 - MIRb SINE MIR -27 235 126 2 955 562 276 110 14 chr15 48528364 48528632 -54966342 - MTE2a LTR MaLR -1 378 1 2 955 2898 208 15 73 chr15 48528697 48529435 -54965539 - Lx2B LINE L1 -7 6993 6299 3 955 2248 194 0 11 chr15 48529430 48529878 -54965096 + Lx2B LINE L1 5838 6280 -720 3 955 198 0 0 0 chr15 48530289 48530311 -54964663 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 3 955 774 299 45 11 chr15 48530505 48530792 -54964182 + RMER15 LTR ERVL 277 573 -2 3 955 645 162 78 35 chr15 48530842 48530983 -54963991 - B1_Mus1 SINE Alu 0 148 2 3 955 279 0 0 0 chr15 48532168 48532199 -54962775 + (A)n Simple_repeat Simple_repeat 1 31 0 3 955 467 284 130 80 chr15 48532330 48532606 -54962368 - MER2 DNA MER2_type -1 344 55 3 955 463 346 20 69 chr15 48532729 48532931 -54962043 - B3A SINE B2 -2 196 5 3 955 1500 213 98 17 chr15 48533120 48533500 -54961474 - MTB_Mm LTR MaLR -24 383 3 3 955 261 0 0 0 chr15 48533663 48533692 -54961282 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 955 224 371 0 0 chr15 48533723 48533785 -54961189 - RSINE1 SINE B4 -13 152 91 3 955 427 311 105 62 chr15 48533953 48534450 -54960524 + Charlie5 DNA MER1_type 435 952 -1672 4 955 186 192 0 0 chr15 48534450 48534502 -54960472 + A-rich Low_complexity Low_complexity 1 52 0 4 955 222 240 0 0 chr15 48535466 48535516 -54959458 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 955 473 308 60 57 chr15 48535516 48535781 -54959193 - Tigger7 DNA MER2_type -100 2391 2126 4 955 438 316 61 0 chr15 48535855 48535969 -54959005 - B3 SINE B2 -93 123 3 4 955 729 210 48 42 chr15 48536112 48536395 -54958579 - Lx4B LINE L1 0 7058 6688 4 955 241 213 0 0 chr15 48536388 48536435 -54958539 + Lx5 LINE L1 6547 6593 -457 4 955 324 0 0 0 chr15 48536469 48536505 -54958469 + (T)n Simple_repeat Simple_repeat 1 36 0 4 955 455 308 45 55 chr15 48536700 48536920 -54958054 + Lx7 LINE L1 7083 7300 -396 4 955 22 35 0 0 chr15 48536950 48536979 -54957995 + AT_rich Low_complexity Low_complexity 1 29 0 4 955 287 292 0 0 chr15 48537639 48537704 -54957270 - ID4 SINE ID -4 79 15 5 955 943 309 39 8 chr15 48537748 48538070 -54956904 - ORR1D1 LTR MaLR -2 357 1 5 955 259 259 118 0 chr15 48540091 48540176 -54954798 - MLT1D LTR MaLR -15 490 410 5 955 7218 110 18 2 chr15 48540299 48541547 -54953427 - L1_Mus4 LINE L1 0 6636 5370 5 955 1008 162 0 0 chr15 48541540 48541719 -54953255 + L1_Mm LINE L1 4915 5093 -790 5 955 207 0 0 0 chr15 48541817 48541840 -54953134 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 955 806 334 46 60 chr15 48542208 48542711 -54952263 - Lx8 LINE L1 -7 7466 6971 5 955 1009 236 67 40 chr15 48543446 48543771 -54951203 - RMER1B Other Other 0 1030 697 5 955 373 246 24 24 chr15 48544107 48544232 -54950742 + L1_Mur2 LINE L1 4238 4362 -1518 5 955 2506 199 58 11 chr15 48544276 48544811 -54950163 + RLTR20B2 LTR ERVK 1 560 0 5 955 472 305 68 110 chr15 48544845 48545370 -54949604 + L1_Mur2 LINE L1 4450 4991 -1152 5 955 1535 43 0 11 chr15 48545370 48545556 -54949418 + B2_Mm1t SINE B2 2 185 -8 6 955 408 300 84 70 chr15 48545556 48546023 -54948951 + L1_Mur2 LINE L1 4936 5436 -447 5 955 27 81 0 0 chr15 48546318 48546380 -54948594 + AT_rich Low_complexity Low_complexity 1 62 0 6 955 308 333 35 14 chr15 48546873 48547016 -54947958 + L3b LINE CR1 36 181 -301 6 955 424 104 0 0 chr15 48547974 48548041 -54946933 - L1_Mus2 LINE L1 0 6566 6500 6 955 1360 86 0 0 chr15 48548357 48548544 -54946430 + L1_Mus2 LINE L1 6378 6564 -2 6 955 475 195 17 0 chr15 48548822 48548940 -54946034 + CT-rich Low_complexity Low_complexity 2 121 0 6 955 485 205 8 0 chr15 48548991 48549113 -54945861 + (TA)n Simple_repeat Simple_repeat 2 124 0 6 955 889 325 68 58 chr15 48549611 48550026 -54944948 - MTD LTR MaLR 0 419 1 6 955 333 276 56 28 chr15 48550517 48550625 -54944349 + RSINE1 SINE B4 12 122 -43 6 955 444 37 0 0 chr15 48550637 48550691 -54944283 + (CA)n Simple_repeat Simple_repeat 1 54 0 6 955 687 265 89 45 chr15 48550823 48550995 -54943979 - RMER1C Other Other -15 1327 1151 7 955 6234 36 1 0 chr15 48550995 48551734 -54943240 - L1Md_F2 LINE L1 -12 6570 5831 7 955 687 265 89 45 chr15 48551734 48551830 -54943144 - RMER1C Other Other -192 1150 1047 7 955 1340 179 136 10 chr15 48551831 48552164 -54942810 - Lx2 LINE L1 -27 6970 6637 7 955 480 184 0 0 chr15 48552168 48552266 -54942708 + CT-rich Low_complexity Low_complexity 2 99 0 7 955 1344 308 26 16 chr15 48552275 48552661 -54942313 - RMER1C Other Other -356 986 597 7 955 213 278 0 0 chr15 48553262 48553352 -54941622 + (TA)n Simple_repeat Simple_repeat 1 90 0 7 955 6789 65 15 0 chr15 48553457 48554332 -54940642 + L1Md_F2 LINE L1 4700 5587 -296 7 955 7935 56 0 1 chr15 48554333 48555314 -54939660 + L1Md_F2 LINE L1 5589 6568 -14 7 955 29 28 0 0 chr15 48555378 48555414 -54939560 + AT_rich Low_complexity Low_complexity 1 36 0 7 955 28 71 0 0 chr15 48555534 48555590 -54939384 + AT_rich Low_complexity Low_complexity 1 56 0 7 955 220 266 76 30 chr15 48555647 48555713 -54939261 - ID4 SINE ID -3 80 12 7 955 341 156 13 0 chr15 48558417 48558494 -54936480 + GA-rich Low_complexity Low_complexity 1 78 0 7 955 467 17 0 16 chr15 48558589 48558650 -54936324 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 8 955 21 36 0 0 chr15 48559036 48559064 -54935910 + AT_rich Low_complexity Low_complexity 1 28 0 8 955 528 45 0 0 chr15 48559079 48559146 -54935828 + (TG)n Simple_repeat Simple_repeat 1 67 0 8 955 324 0 0 0 chr15 48559146 48559181 -54935793 + (GA)n Simple_repeat Simple_repeat 1 36 0 8 955 537 58 0 0 chr15 48559409 48559478 -54935496 + (CA)n Simple_repeat Simple_repeat 1 69 0 8 955 237 206 48 0 chr15 48560289 48560352 -54934622 - Lx9 LINE L1 0 7644 7579 8 955 2687 48 3 17 chr15 48560749 48561111 -54933863 - L1_Mus2 LINE L1 -2 6564 6208 8 955 305 333 52 7 chr15 48562281 48562417 -54932557 - L1MC LINE L1 -2449 5433 5292 8 955 22 35 0 0 chr15 48562922 48562951 -54932023 + AT_rich Low_complexity Low_complexity 1 29 0 8 955 3284 255 94 15 chr15 48563433 48564418 -54930556 + Lx7 LINE L1 5859 6921 -775 8 955 1076 203 47 36 chr15 48564419 48564695 -54930279 + Lx7 LINE L1 7139 7417 -279 8 955 337 266 68 68 chr15 48564718 48564779 -54930195 + Lx7 LINE L1 7494 7559 -137 8 955 414 0 0 0 chr15 48564779 48564825 -54930149 + (TTA)n Simple_repeat Simple_repeat 3 48 0 9 955 337 266 68 68 chr15 48564825 48564953 -54930021 + Lx7 LINE L1 7560 7683 -13 8 955 351 65 0 0 chr15 48564984 48565030 -54929944 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 9 955 217 133 67 0 chr15 48566883 48566958 -54928016 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 9 955 22 0 0 0 chr15 48567896 48567918 -54927056 + AT_rich Low_complexity Low_complexity 1 22 0 9 955 2613 74 8 3 chr15 48568105 48568459 -54926515 - L1_Mus3 LINE L1 -8 6630 6275 9 955 1010 117 0 0 chr15 48569125 48569262 -54925712 + B1_Mus1 SINE Alu 5 141 -7 9 955 216 0 0 0 chr15 48569264 48569288 -54925686 + (A)n Simple_repeat Simple_repeat 1 24 0 9 955 3178 19 50 0 chr15 48569366 48569743 -54925231 + MTA_Mm LTR MaLR 1 396 0 9 955 3565 70 6 6 chr15 48569887 48570364 -54924610 + L1Md_F2 LINE L1 6095 6571 -11 9 955 4712 204 45 14 chr15 48570988 48572330 -54922644 + Lx4B LINE L1 5447 6787 -271 9 955 3685 147 7 5 chr15 48572451 48573047 -54921927 - Lx2 LINE L1 -1 6996 6400 1 955 1126 164 0 10 chr15 48573042 48573251 -54921723 - Lx2 LINE L1 -752 6248 6042 1 955 3140 146 41 2 chr15 48573921 48574463 -54920511 - Lx2 LINE L1 0 6997 6435 1 955 198 103 0 0 chr15 48574952 48574981 -54919993 + (A)n Simple_repeat Simple_repeat 1 29 0 1 955 420 20 0 0 chr15 48575536 48575585 -54919389 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 955 259 289 0 142 chr15 48575698 48575811 -54919163 + B1F1 SINE Alu 1 97 -52 1 955 571 150 8 8 chr15 48576521 48576642 -54918332 + Lx3C LINE L1 6854 6974 -2 1 955 36 53 0 0 chr15 48576650 48576707 -54918267 + AT_rich Low_complexity Low_complexity 1 57 0 1 955 1816 171 9 3 chr15 48576839 48577173 -54917801 + Lx LINE L1 6317 6652 -2 1 955 248 325 94 16 chr15 48578154 48578282 -54916692 + L2a LINE L2 3284 3421 -5 1 955 279 216 70 21 chr15 48578797 48578892 -54916082 - B3 SINE B2 -89 109 5 1 955 489 97 0 0 chr15 48579212 48579284 -54915690 + (TA)n Simple_repeat Simple_repeat 2 73 0 1 955 300 53 0 0 chr15 48579284 48579321 -54915653 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 955 307 360 99 7 chr15 48579591 48579742 -54915232 + RSINE1 SINE B4 1 165 0 1 955 450 190 26 0 chr15 48579773 48579889 -54915085 + GA-rich Low_complexity Low_complexity 2 120 0 1 955 959 48 0 8 chr15 48580434 48580560 -54914414 + (CATATA)n Simple_repeat Simple_repeat 4 128 0 1 955 542 325 51 31 chr15 48580640 48580992 -54913982 + Lx9 LINE L1 7256 7614 -30 1 955 21 0 0 0 chr15 48581183 48581204 -54913770 + AT_rich Low_complexity Low_complexity 1 21 0 1 955 28 29 0 0 chr15 48582633 48582668 -54912306 + AT_rich Low_complexity Low_complexity 1 35 0 1 955 210 208 0 0 chr15 48582712 48582760 -54912214 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 955 24 0 0 0 chr15 48582847 48582871 -54912103 + AT_rich Low_complexity Low_complexity 1 24 0 1 955 213 260 20 0 chr15 48583035 48583085 -54911889 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 1 955 24 67 0 0 chr15 48583114 48583159 -54911815 + AT_rich Low_complexity Low_complexity 1 45 0 1 955 944 210 11 0 chr15 48584196 48584377 -54910597 + Lx4B LINE L1 6434 6616 -442 1 955 815 213 16 89 chr15 48584367 48584625 -54910349 + Lx2B LINE L1 6761 6999 -1 1 955 437 316 19 25 chr15 48584650 48584809 -54910165 - Lx7 LINE L1 -388 7308 7151 1 955 656 281 146 20 chr15 48584799 48585266 -54909708 - L1MA5A LINE L1 -331 5966 5444 1 955 429 264 0 0 chr15 48585328 48585415 -54909559 + Lx7 LINE L1 5591 5677 -2019 1 955 325 218 45 73 chr15 48585395 48585573 -54909401 - L1MA5A LINE L1 -854 5443 5271 1 955 253 324 35 18 chr15 48585714 48585827 -54909147 + B1F SINE Alu 27 141 -8 1 955 29 0 0 0 chr15 48586061 48586090 -54908884 + AT_rich Low_complexity Low_complexity 1 29 0 1 955 387 211 94 72 chr15 48586342 48586482 -54908492 - Lx7 LINE L1 -4 7692 7567 1 955 286 228 14 29 chr15 48587863 48588003 -54906971 + (TATG)n Simple_repeat Simple_repeat 4 141 0 1 955 239 213 13 0 chr15 48588038 48588113 -54906861 + (TG)n Simple_repeat Simple_repeat 1 76 0 1 955 234 198 12 36 chr15 48588625 48588709 -54906265 + (TATG)n Simple_repeat Simple_repeat 4 85 0 1 955 1428 279 15 0 chr15 48589047 48589373 -54905601 - Lx9 LINE L1 -349 7295 6965 1 955 1126 239 65 3 chr15 48589361 48589684 -54905290 + Lx9 LINE L1 7295 7637 -7 1 955 246 230 65 24 chr15 48591295 48591464 -54903510 + (TAGA)n Simple_repeat Simple_repeat 1 176 0 1 955 304 284 75 52 chr15 48592646 48592780 -54902194 - B1F SINE Alu -1 148 12 1 955 290 289 146 62 chr15 48593415 48593607 -54901367 + B4A SINE B4 72 279 -13 1 955 345 316 16 6 chr15 48593965 48594082 -54900892 - PB1D10 SINE Alu -29 120 1 1 955 281 103 35 0 chr15 48594213 48594271 -54900703 + (TTTG)n Simple_repeat Simple_repeat 1 60 0 1 955 780 103 17 25 chr15 48594277 48594397 -54900577 - PB1D9 SINE Alu 0 120 2 1 955 294 333 19 38 chr15 48594594 48594700 -54900274 + B1_Mur3 SINE Alu 3 106 -43 1 955 219 114 0 0 chr15 48594701 48594736 -54900238 + (GGA)n Simple_repeat Simple_repeat 2 36 0 1 955 21 36 0 0 chr15 48595523 48595551 -54899423 + AT_rich Low_complexity Low_complexity 1 28 0 1 955 21 71 0 0 chr15 48595785 48595827 -54899147 + AT_rich Low_complexity Low_complexity 1 42 0 1 955 21 71 0 0 chr15 48595930 48595972 -54899002 + AT_rich Low_complexity Low_complexity 1 42 0 1 955 22 0 0 0 chr15 48596073 48596095 -54898879 + AT_rich Low_complexity Low_complexity 1 22 0 1 955 255 95 0 0 chr15 48596096 48596138 -54898836 - Lx4A LINE L1 -3 7055 7014 1 955 297 318 41 6 chr15 48596239 48596427 -54898547 - L1MA6 LINE L1 -269 6031 5836 1 955 248 332 101 66 chr15 48596696 48596954 -54898020 - Lx8 LINE L1 -301 7172 6906 1 955 28 29 0 0 chr15 48597018 48597053 -54897921 + AT_rich Low_complexity Low_complexity 1 35 0 1 955 290 273 99 14 chr15 48597105 48597246 -54897728 + Charlie5 DNA MER1_type 745 897 -1727 1 955 1328 270 63 19 chr15 48597655 48598067 -54896907 - Lx6 LINE L1 -15 7445 7016 1 955 485 242 16 16 chr15 48598075 48598201 -54896773 + Lx7 LINE L1 6898 7023 -673 1 955 747 313 43 20 chr15 48598347 48598738 -54896236 + Charlie5 DNA MER1_type 1489 1888 -736 1 955 1571 34 5 37 chr15 48599018 48599235 -54895739 + L1Md_F2 LINE L1 6373 6582 0 1 955 22 0 0 0 chr15 48599302 48599324 -54895650 + AT_rich Low_complexity Low_complexity 1 22 0 1 955 232 211 0 0 chr15 48599580 48599632 -54895342 + L1MA4 LINE L1 6205 6256 -44 1 955 1678 226 46 27 chr15 48599653 48600130 -54894844 + L1_Mur1 LINE L1 782 1267 -5715 1 955 641 257 253 44 chr15 48600134 48600427 -54894547 + Lx4B LINE L1 6684 7037 -21 1 955 240 35 0 0 chr15 48600427 48600456 -54894518 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 1 955 489 17 0 0 chr15 48601268 48601326 -54893648 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 955 205 265 44 0 chr15 48603195 48603263 -54891711 + (CATATA)n Simple_repeat Simple_repeat 4 74 0 1 955 763 217 63 141 chr15 48604672 48605020 -54889954 + Lx5 LINE L1 6723 7043 -7 1 955 228 217 0 32 chr15 48605767 48605829 -54889145 + A-rich Low_complexity Low_complexity 2 61 0 1 955 949 255 65 16 chr15 48605829 48606076 -54888898 + ORR1D2 LTR MaLR 112 370 0 1 955 427 313 43 62 chr15 48606484 48606692 -54888282 + B3 SINE B2 5 208 -8 1 955 738 239 86 0 chr15 48607452 48607615 -54887359 - B3 SINE B2 -38 178 2 1 955 1700 192 70 11 chr15 48608104 48608477 -54886497 - Lx4B LINE L1 -4 7054 6660 1 955 560 323 61 5 chr15 48608842 48609038 -54885936 + B4 SINE B4 4 210 -82 1 955 22 35 0 0 chr15 48609763 48609792 -54885182 + AT_rich Low_complexity Low_complexity 1 29 0 1 955 612 259 53 24 chr15 48610819 48610964 -54884010 + B3A SINE B2 16 166 -32 1 955 225 0 0 0 chr15 48610964 48610989 -54883985 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 1 955 612 259 53 24 chr15 48610989 48611013 -54883961 + B3A SINE B2 167 190 -8 1 955 584 231 137 21 chr15 48611093 48611283 -54883691 + B3 SINE B2 3 214 -2 1 955 546 91 0 0 chr15 48611321 48611398 -54883576 + (ATG)n Simple_repeat Simple_repeat 2 78 0 1 955 972 0 0 0 chr15 48611643 48611751 -54883223 + (GAA)n Simple_repeat Simple_repeat 3 110 0 1 955 576 275 0 26 chr15 48612838 48612991 -54881983 - B1_Mur2 SINE Alu 0 149 1 1 955 910 124 0 0 chr15 48613170 48613323 -54881651 - L1_Mus4 LINE L1 -5 6631 6479 1 955 351 150 0 0 chr15 48614387 48614447 -54880527 + (T)n Simple_repeat Simple_repeat 1 60 0 1 955 22 35 0 0 chr15 48615295 48615324 -54879650 + AT_rich Low_complexity Low_complexity 1 29 0 1 955 470 331 13 13 chr15 48615384 48615534 -54879440 - RSINE1 SINE B4 -2 163 14 1 955 213 361 42 48 chr15 48616497 48616686 -54878288 - MER5A DNA MER1_type -1 188 1 1 955 450 349 59 0 chr15 48617800 48617825 -54877149 + ID SINE ID 52 85 -139 1 955 264 362 42 14 chr15 48617825 48617968 -54877006 + B1_Mm SINE Alu 1 147 0 1 955 735 22 0 0 chr15 48618119 48618208 -54876766 + (CA)n Simple_repeat Simple_repeat 2 90 0 1 955 459 0 0 0 chr15 48619425 48619476 -54875498 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 955 726 141 0 0 chr15 48620325 48620453 -54874521 + (TCCC)n Simple_repeat Simple_repeat 2 129 0 1 955 243 0 0 0 chr15 48620860 48620887 -54874087 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 955 513 0 0 0 chr15 48621774 48621831 -54873143 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 955 36 0 0 0 chr15 48622618 48622654 -54872320 + AT_rich Low_complexity Low_complexity 1 36 0 1 955 21 0 0 0 chr15 48624211 48624232 -54870742 + AT_rich Low_complexity Low_complexity 1 21 0 1 955 273 57 0 0 chr15 48625235 48625270 -54869704 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 955 432 0 0 0 chr15 48625270 48625317 -54869657 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 955 181 268 166 60 chr15 48626336 48626487 -54868487 - MIRb SINE MIR -4 264 98 1 955 22 0 0 0 chr15 48626715 48626737 -54868237 + AT_rich Low_complexity Low_complexity 1 22 0 1 955 21 0 0 0 chr15 48627327 48627348 -54867626 + AT_rich Low_complexity Low_complexity 1 21 0 1 956 552 70 0 0 chr15 48628507 48628593 -54866381 - L1_Mus3 LINE L1 0 6638 6553 1 956 735 140 62 14 chr15 48628609 48628754 -54866220 - Lx4A LINE L1 -2 7056 6905 1 956 1157 62 0 0 chr15 48628758 48628903 -54866071 - B1_Mus1 SINE Alu -3 145 1 1 956 5160 238 66 22 chr15 48629277 48630575 -54864399 - Lx5 LINE L1 -20 7030 5675 1 956 2039 160 8 6 chr15 48630573 48630931 -54864043 - L1_Mur2 LINE L1 -935 4942 4584 1 956 183 370 14 14 chr15 48631770 48631844 -54863130 - L2c LINE L2 -51 3336 3263 1 956 195 69 0 0 chr15 48632420 48632449 -54862525 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2 956 26 50 0 0 chr15 48632522 48632562 -54862412 + AT_rich Low_complexity Low_complexity 1 40 0 2 956 189 132 0 0 chr15 48633023 48633061 -54861913 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2 956 1046 109 7 0 chr15 48633071 48633218 -54861756 - B1_Mus1 SINE Alu 0 148 1 2 956 207 0 0 0 chr15 48633240 48633263 -54861711 + (A)n Simple_repeat Simple_repeat 1 23 0 2 956 3004 218 32 18 chr15 48633409 48634095 -54860879 - Lx9 LINE L1 -238 7406 6711 2 956 343 163 89 30 chr15 48634104 48634205 -54860769 + Lx9 LINE L1 7412 7518 -126 2 956 34 55 0 0 chr15 48634328 48634383 -54860591 + AT_rich Low_complexity Low_complexity 1 55 0 2 956 250 351 75 50 chr15 48634449 48634689 -54860285 + MLT1C LTR MaLR 210 455 -12 2 956 279 250 0 56 chr15 48635788 48635877 -54859097 + GA-rich Low_complexity Low_complexity 1 84 0 2 956 1227 63 0 0 chr15 48636461 48636635 -54858339 + (TG)n Simple_repeat Simple_repeat 2 175 0 2 956 212 329 27 27 chr15 48636669 48636744 -54858230 - RSINE1 SINE B4 -38 127 53 2 956 2065 186 246 40 chr15 48637106 48637676 -54857298 - RMER6C LTR ERVK 0 690 3 2 956 3017 36 0 0 chr15 48637881 48638244 -54856730 - L1Md_F2 LINE L1 -12 6570 6208 2 956 1653 298 23 48 chr15 48638252 48638771 -54856203 - Lx6 LINE L1 -14 7446 6941 2 956 21 0 0 0 chr15 48640799 48640820 -54854154 + AT_rich Low_complexity Low_complexity 1 21 0 2 956 1594 312 19 64 chr15 48640970 48641610 -54853364 + Lx8 LINE L1 6434 7044 -429 2 956 204 40 0 0 chr15 48641809 48641834 -54853140 + (CATA)n Simple_repeat Simple_repeat 1 25 0 2 956 556 278 21 78 chr15 48641884 48642075 -54852899 - B3A SINE B2 -16 182 3 2 956 239 342 14 0 chr15 48642076 48642149 -54852825 - 4.5SRNA scRNA scRNA -16 78 5 2 956 412 265 8 0 chr15 48642468 48642585 -54852389 + Lx9 LINE L1 7196 7313 -331 2 956 26 30 0 0 chr15 48643991 48644024 -54850950 + AT_rich Low_complexity Low_complexity 1 33 0 2 956 16065 138 21 4 chr15 48644040 48644676 -54850298 + L1Md_F2 LINE L1 2835 3475 -2408 2 956 252 0 0 0 chr15 48644676 48644704 -54850270 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 2 956 16065 138 21 4 chr15 48644704 48646770 -54848204 + L1Md_F2 LINE L1 3476 5584 -299 2 956 6928 81 6 72 chr15 48646772 48647836 -54847138 + L1Md_F2 LINE L1 5588 6580 -2 2 956 4226 114 9 2 chr15 48647819 48648454 -54846520 + L1_Mus3 LINE L1 5997 6636 -2 2 956 430 297 14 35 chr15 48648464 48648607 -54846367 + ORR1D-int LTR MaLR 518 657 -713 2 956 628 294 94 84 chr15 48648801 48649109 -54845865 + MTEb LTR MaLR 62 372 -7 2 956 237 277 0 0 chr15 48649160 48649207 -54845767 - B1F1 SINE Alu -52 97 51 2 956 437 225 55 101 chr15 48649350 48649587 -54845387 + RMER19C LTR ERVK 1 226 -385 2 956 2102 243 14 116 chr15 48649595 48650257 -54844717 + RMER19C LTR ERVK 18 611 0 2 956 4936 228 40 33 chr15 48650264 48651459 -54843515 - Lx5 LINE L1 -81 6969 5756 2 956 21 0 0 0 chr15 48651857 48651878 -54843096 + AT_rich Low_complexity Low_complexity 1 21 0 2 956 1859 342 50 44 chr15 48652222 48652251 -54842723 + Lx9 LINE L1 6398 6427 -1217 2 956 207 0 0 0 chr15 48652251 48652274 -54842700 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2 956 1859 342 50 44 chr15 48652274 48653282 -54841692 + Lx9 LINE L1 6428 7440 -204 2 956 495 0 0 0 chr15 48653287 48653342 -54841632 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 956 697 291 14 45 chr15 48653593 48653816 -54841158 - MTE2a LTR MaLR -163 216 1 2 956 796 317 71 14 chr15 48653855 48654348 -54840626 - L1M2 LINE L1 -1944 4901 4381 2 956 669 86 0 0 chr15 48654535 48654628 -54840346 + (TCCC)n Simple_repeat Simple_repeat 4 96 0 2 956 608 301 29 10 chr15 48654634 48654839 -54840135 - Lx6 LINE L1 -26 7434 7226 2 956 354 317 76 22 chr15 48654841 48655025 -54839949 - L1M2 LINE L1 -2710 4135 3942 2 956 749 279 52 25 chr15 48655130 48655498 -54839476 - L1M2 LINE L1 -4249 2600 2004 2 956 350 281 64 7 chr15 48656090 48656230 -54838744 + ERVL-int LTR ERVL 5279 5426 -331 2 956 988 88 73 0 chr15 48656430 48656567 -54838407 + B1_Mus2 SINE Alu 1 147 0 2 956 207 0 0 0 chr15 48656571 48656594 -54838380 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 2 956 798 98 197 0 chr15 48656829 48656951 -54838023 + B1_Mus1 SINE Alu 3 148 0 2 956 318 26 0 0 chr15 48656955 48656994 -54837980 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2 956 682 244 30 6 chr15 48657011 48657180 -54837794 - RMER15 LTR ERVL -95 480 308 2 956 646 268 95 6 chr15 48657116 48657350 -54837624 - ORR1D1 LTR MaLR -96 263 3 2 956 1400 194 42 102 chr15 48658093 48658484 -54836490 + ORR1B1 LTR MaLR 8 376 -2 2 956 9393 115 11 7 chr15 48658484 48660017 -54834957 + Lx3A LINE L1 5448 6981 0 2 956 321 140 0 0 chr15 48660036 48660086 -54834888 + ORR1B1 LTR MaLR 344 393 -1 2 956 268 209 23 0 chr15 48660131 48660217 -54834757 + (TA)n Simple_repeat Simple_repeat 1 88 0 2 956 254 242 84 0 chr15 48660336 48660431 -54834543 - L1M4b LINE L1 -4245 3089 2987 2 956 23 78 0 0 chr15 48660458 48660509 -54834465 + AT_rich Low_complexity Low_complexity 1 51 0 2 956 30 0 0 0 chr15 48660924 48660954 -54834020 + AT_rich Low_complexity Low_complexity 1 30 0 2 956 244 297 78 0 chr15 48660993 48661121 -54833853 - L1M4b LINE L1 -5249 2085 1948 2 956 334 324 104 33 chr15 48661399 48661581 -54833393 - MLT1B LTR MaLR -2 388 194 2 956 22 35 0 0 chr15 48661904 48661933 -54833041 + AT_rich Low_complexity Low_complexity 1 29 0 2 956 1152 244 31 17 chr15 48662373 48662665 -54832309 - Lx6 LINE L1 -716 6744 6449 2 956 4637 189 47 48 chr15 48662670 48663587 -54831387 - L1_Mur3 LINE L1 -1932 3948 3050 2 956 234 62 0 0 chr15 48663587 48663619 -54831355 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 956 4637 189 47 48 chr15 48663619 48663851 -54831123 - L1_Mur3 LINE L1 -2831 3049 2801 2 956 225 313 14 29 chr15 48663859 48663928 -54831046 - ID4_ SINE ID -11 72 5 2 956 1167 242 7 63 chr15 48663951 48664251 -54830723 - MTD LTR MaLR -13 406 124 2 956 6722 67 1 17 chr15 48664633 48665525 -54829449 - L1Md_F2 LINE L1 -2 6580 5703 2 956 22 56 0 0 chr15 48665529 48665565 -54829409 + AT_rich Low_complexity Low_complexity 1 36 0 2 956 1481 255 44 8 chr15 48665733 48666093 -54828881 - Lx6 LINE L1 -322 7138 6766 2 956 936 27 0 0 chr15 48666095 48666206 -54828768 + (TTC)n Simple_repeat Simple_repeat 1 111 0 2 956 1090 310 33 19 chr15 48666213 48666578 -54828396 - Lx5 LINE L1 -13 7037 6668 2 956 359 268 0 0 chr15 48666757 48666869 -54828105 - L1MC LINE L1 -1494 4652 4541 2 956 39 38 0 0 chr15 48670347 48670400 -54824574 + AT_rich Low_complexity Low_complexity 1 53 0 2 956 286 298 85 0 chr15 48670517 48670611 -54824363 - MLT2B1 LTR ERVL -185 335 234 2 956 248 233 33 0 chr15 48670618 48670678 -54824296 + RLTR12A LTR ERVK 9 70 -498 2 956 387 0 0 0 chr15 48671939 48671982 -54822992 + (TC)n Simple_repeat Simple_repeat 1 43 0 2 956 375 127 0 0 chr15 48671984 48672047 -54822927 + (CATA)n Simple_repeat Simple_repeat 4 66 0 2 956 210 37 0 0 chr15 48672535 48672562 -54822412 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 956 239 304 0 0 chr15 48672672 48672728 -54822246 + polypyrimidine Low_complexity Low_complexity 5 60 0 2 956 210 37 0 0 chr15 48672859 48672886 -54822088 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 956 4016 73 4 9 chr15 48673489 48674030 -54820944 + L1Md_F2 LINE L1 6042 6579 -3 2 956 661 343 101 40 chr15 48674098 48674526 -54820448 + MER90a LTR ERV1 143 596 -18 2 956 345 75 0 0 chr15 48675253 48675306 -54819668 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 956 193 28 0 100 chr15 48675318 48675358 -54819616 + (CAGAGA)n Simple_repeat Simple_repeat 5 40 0 2 956 477 76 0 0 chr15 48676666 48676732 -54818242 + (GA)n Simple_repeat Simple_repeat 2 67 0 2 956 303 88 0 17 chr15 48676908 48676966 -54818008 - Lx LINE L1 -1 6653 6597 2 956 295 270 59 41 chr15 48677054 48677224 -54817750 + Lx9 LINE L1 7305 7477 -167 2 956 643 296 38 0 chr15 48677340 48677526 -54817448 - B3 SINE B2 -4 212 20 2 956 21117 107 33 19 chr15 48677616 48678956 -54816018 - L1_Mus3 LINE L1 -2 6636 5282 2 956 210 37 0 0 chr15 48678956 48678983 -54815991 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2 956 3462 62 0 0 chr15 48678983 48679420 -54815554 - L1Md_F2 LINE L1 -18 6564 6128 2 956 21117 156 39 60 chr15 48679420 48681161 -54813813 - L1_Mus3 LINE L1 -602 5281 3557 2 956 1105 69 7 0 chr15 48681161 48681305 -54813669 + B1_Mus2 SINE Alu 3 147 0 2 956 21117 149 36 55 chr15 48681305 48683848 -54811126 - L1_Mus3 LINE L1 -2327 3556 1096 2 956 270 0 0 0 chr15 48683848 48683878 -54811096 + (CAT)n Simple_repeat Simple_repeat 1 30 0 2 956 6348 93 13 8 chr15 48683878 48684538 -54810436 - L1_Mus3 LINE L1 -5543 1095 424 2 956 3079 152 41 16 chr15 48684543 48685105 -54809869 - L1_Mus4 LINE L1 -18 6618 6043 2 956 2564 180 20 30 chr15 48685105 48686279 -54808695 - L1VL4 LINE L1 -2314 1245 144 2 956 444 19 0 0 chr15 48686370 48686423 -54808551 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 956 239 315 0 32 chr15 48686504 48686599 -54808375 + L2a LINE L2 3265 3356 -70 2 956 30 0 0 0 chr15 48686866 48686896 -54808078 + AT_rich Low_complexity Low_complexity 1 30 0 2 956 1738 227 67 10 chr15 48688028 48688419 -54806555 - MTC LTR MaLR -8 413 1 2 956 3683 209 88 22 chr15 48688423 48689599 -54805375 - MTC-int LTR MaLR -4 1254 1 2 956 28 61 0 0 chr15 48691070 48691119 -54803855 + AT_rich Low_complexity Low_complexity 1 49 0 2 956 257 325 87 40 chr15 48691547 48691720 -54803254 + MLT1A LTR MaLR 115 295 -79 2 956 885 187 0 0 chr15 48691884 48692034 -54802940 + B1_Mur4 SINE Alu 1 150 0 2 956 567 0 0 0 chr15 48692070 48692133 -54802841 + (CA)n Simple_repeat Simple_repeat 1 63 0 2 956 722 255 34 14 chr15 48693125 48693332 -54801642 - B3 SINE B2 0 216 6 2 956 181 151 19 19 chr15 48693570 48693624 -54801350 + T-rich Low_complexity Low_complexity 2 55 0 2 956 491 318 96 25 chr15 48693646 48693885 -54801089 - Lx9 LINE L1 -281 7363 7108 2 956 5036 130 71 1 chr15 48693940 48694739 -54800235 - Lx3B LINE L1 0 6973 6119 2 956 9703 176 29 14 chr15 48694812 48694945 -54800029 - L1_Mur2 LINE L1 -5 5872 5739 2 956 3755 206 18 3 chr15 48694945 48695720 -54799254 - Lx2B LINE L1 -6 6994 6208 3 956 9703 176 29 14 chr15 48695720 48697502 -54797472 - L1_Mur2 LINE L1 -139 5738 3929 2 956 523 253 111 11 chr15 48697511 48697691 -54797283 - L1M2 LINE L1 -1096 5047 4850 3 956 261 0 0 0 chr15 48697859 48697888 -54797086 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 956 22 88 0 0 chr15 48698024 48698081 -54796893 + AT_rich Low_complexity Low_complexity 1 57 0 3 956 256 191 48 0 chr15 48698149 48698212 -54796762 + Lx7 LINE L1 7613 7678 -18 3 956 455 257 62 22 chr15 48699353 48699532 -54795442 - L3b LINE CR1 -86 396 211 3 956 21 0 0 0 chr15 48699532 48699553 -54795421 + AT_rich Low_complexity Low_complexity 1 21 0 3 956 1879 119 0 10 chr15 48700759 48701055 -54793919 + L1_Mus4 LINE L1 6341 6633 -3 3 956 335 289 48 95 chr15 48701175 48701343 -54793631 + MTE2a LTR MaLR 23 182 -197 3 956 218 194 0 0 chr15 48702085 48702121 -54792853 - PB1D9 SINE Alu -84 36 1 3 956 25 31 0 0 chr15 48702191 48702223 -54792751 + AT_rich Low_complexity Low_complexity 1 32 0 3 956 423 275 30 108 chr15 48702442 48702597 -54792377 + ORR1D1 LTR MaLR 28 171 -203 3 956 366 85 0 0 chr15 48702597 48702656 -54792318 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 956 423 275 30 108 chr15 48702656 48702667 -54792307 + ORR1D1 LTR MaLR 172 181 -193 3 956 222 180 0 39 chr15 48702669 48702721 -54792253 + (TCTCTG)n Simple_repeat Simple_repeat 3 52 0 3 956 396 0 0 0 chr15 48702793 48702837 -54792137 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 3 956 620 215 121 0 chr15 48702841 48702990 -54791984 - Lx6 LINE L1 -796 6664 6498 3 956 7421 84 3 6 chr15 48702979 48703961 -54791013 - L1_Mus2 LINE L1 0 6566 5588 3 956 3066 235 117 6 chr15 48703979 48705635 -54789339 - Lx6 LINE L1 -948 6512 4642 3 956 212 0 36 0 chr15 48705635 48705663 -54789311 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 956 2694 237 151 14 chr15 48705663 48705697 -54789277 - Lx6 LINE L1 -1245 4641 4602 3 956 20714 165 42 62 chr15 48705712 48708911 -54786063 + Lx2 LINE L1 356 3491 -2395 3 956 188 0 74 0 chr15 48708911 48708938 -54786036 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3 956 20714 176 25 87 chr15 48708938 48709083 -54785891 + Lx2 LINE L1 3492 3611 -2275 3 956 1352 48 0 46 chr15 48709083 48709279 -54785695 - L1Md_F2 LINE L1 0 6582 6396 3 956 20714 176 25 87 chr15 48709279 48711251 -54783723 + Lx2 LINE L1 3612 5272 -614 3 956 261 0 0 0 chr15 48711251 48711280 -54783694 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3 956 20714 141 27 31 chr15 48711280 48712639 -54782335 + Lx2 LINE L1 5273 6645 -352 3 956 1395 109 4 48 chr15 48712637 48712868 -54782106 + Lx LINE L1 6427 6647 -7 3 956 522 205 24 6 chr15 48712892 48713061 -54781913 - L1_Mur3 LINE L1 -2725 3152 2992 3 956 23 0 0 0 chr15 48713078 48713101 -54781873 + AT_rich Low_complexity Low_complexity 1 23 0 3 956 32690 79 2 16 chr15 48713101 48718256 -54776718 + L1Md_F2 LINE L1 508 5586 -297 3 956 7864 63 0 0 chr15 48718256 48719241 -54775733 + L1Md_F2 LINE L1 5587 6571 -11 3 956 315 59 57 29 chr15 48719352 48719422 -54775552 + (CAAAA)n Simple_repeat Simple_repeat 2 73 0 3 956 1111 89 0 0 chr15 48721676 48721822 -54773152 + B1_Mus1 SINE Alu 2 147 -1 3 956 341 56 69 0 chr15 48721824 48721896 -54773078 + (CAAAAA)n Simple_repeat Simple_repeat 3 79 0 3 956 3050 192 60 39 chr15 48721904 48722648 -54772326 - L1_Mur3 LINE L1 -2953 2927 2168 3 956 684 282 38 38 chr15 48722649 48722859 -54772115 - MTD LTR MaLR -209 210 1 3 956 21 36 0 0 chr15 48722913 48722941 -54772033 + AT_rich Low_complexity Low_complexity 1 28 0 3 956 312 247 0 0 chr15 48724360 48724449 -54770525 - Lx5 LINE L1 -25 5822 5734 3 956 450 316 29 17 chr15 48724659 48724833 -54770141 - Lx9 LINE L1 -1164 6480 6305 3 956 529 249 140 5 chr15 48725138 48725324 -54769650 - Lx9 LINE L1 0 5847 5637 3 956 5145 227 119 35 chr15 48725312 48726923 -54768051 + Lx6 LINE L1 5117 6886 -810 3 956 582 28 0 0 chr15 48726923 48726995 -54767979 + (CA)n Simple_repeat Simple_repeat 2 73 0 3 956 5145 249 72 61 chr15 48726995 48727607 -54767367 + Lx6 LINE L1 6879 7456 -4 3 956 430 233 42 8 chr15 48727582 48727716 -54767258 - Lx5 LINE L1 -1313 5737 5556 3 956 1796 310 34 21 chr15 48727742 48728358 -54766616 + Lx9 LINE L1 6488 7111 -533 3 956 508 87 0 0 chr15 48728358 48728427 -54766547 + ORR1A3 LTR MaLR 258 326 0 3 956 3267 167 5 4 chr15 48728427 48728986 -54765988 + ORR1A3-int LTR MaLR 1 560 -1403 3 956 541 264 21 28 chr15 48728942 48729086 -54765888 + MT2B LTR ERVL 122 264 -337 3 956 621 0 0 0 chr15 48729385 48729454 -54765520 + (TC)n Simple_repeat Simple_repeat 2 70 0 3 956 189 0 0 0 chr15 48729454 48729474 -54765500 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 956 377 214 60 0 chr15 48729598 48729682 -54765292 + MT2B LTR ERVL 169 257 -344 3 956 1216 158 6 93 chr15 48729625 48729947 -54765027 + ORR1A3-int LTR MaLR 767 1060 -903 3 956 2428 114 146 2 chr15 48729993 48730458 -54764516 - RLTR47_MM LTR ERV1 0 532 1 3 956 1468 129 25 0 chr15 48730471 48730711 -54764263 - ORR1A2 LTR MaLR -80 247 2 3 956 207 0 0 0 chr15 48730936 48730959 -54764015 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 956 291 54 0 0 chr15 48730965 48731002 -54763972 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 956 281 250 0 0 chr15 48731014 48731070 -54763904 - B4A SINE B4 -230 62 7 3 956 621 0 0 0 chr15 48731153 48731222 -54763752 + (TC)n Simple_repeat Simple_repeat 2 70 0 3 956 845 206 59 16 chr15 48731423 48731610 -54763364 + B3 SINE B2 22 216 0 3 956 841 175 35 92 chr15 48731883 48732110 -54762864 + Lx3C LINE L1 6760 6973 -3 3 956 2182 131 23 7 chr15 48732131 48732509 -54762465 - Lx5 LINE L1 -611 5275 4902 3 956 4844 107 36 13 chr15 48732507 48733565 -54761409 + Lx3B LINE L1 5275 6342 -631 3 956 1060 127 38 0 chr15 48733562 48733720 -54761254 + Lx3B LINE L1 6444 6607 -366 3 956 1752 142 40 29 chr15 48733721 48734069 -54760905 - RMER17A2 LTR ERVK 0 906 555 3 956 1316 174 37 57 chr15 48733959 48734258 -54760716 + MTB_Mm LTR MaLR 115 407 0 3 956 2225 194 73 35 chr15 48734258 48734802 -54760172 + Lx5 LINE L1 5877 6441 -609 3 956 1186 239 24 17 chr15 48734808 48735106 -54759868 - Lx4B LINE L1 -2 7056 6757 3 956 2370 216 137 9 chr15 48735108 48735126 -54759848 + Lx5 LINE L1 6439 6452 -598 3 956 4257 99 8 148 chr15 48735126 48735490 -54759484 - RMER17A LTR ERVK 0 751 410 3 956 396 0 0 0 chr15 48735490 48735534 -54759440 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 956 4257 99 8 148 chr15 48735534 48736042 -54758932 - RMER17A LTR ERVK -342 409 1 3 956 2370 216 137 9 chr15 48736042 48736564 -54758410 + Lx5 LINE L1 6453 7048 -2 3 956 15842 106 58 8 chr15 48736752 48738199 -54756775 - L1_Mus3 LINE L1 -2 6636 5171 3 956 589 115 94 0 chr15 48738199 48738271 -54756703 - U6 snRNA snRNA -2 105 31 3 956 426 15 29 29 chr15 48738271 48738339 -54756635 + (TTTTG)n Simple_repeat Simple_repeat 5 72 0 3 956 589 115 94 0 chr15 48738339 48738362 -54756612 - U6 snRNA snRNA -77 30 2 3 956 15842 138 14 25 chr15 48738362 48740354 -54754620 - L1_Mus3 LINE L1 -713 5170 3150 3 956 26 0 0 0 chr15 48740354 48740380 -54754594 + AT_rich Low_complexity Low_complexity 1 26 0 3 956 34775 71 5 8 chr15 48740434 48746335 -54748639 - L1Md_F3 LINE L1 0 6584 720 3 956 1972 36 27 16 chr15 48746335 48746592 -54748382 - L1Md_F3 LINE L1 0 6584 6325 3 956 4708 162 15 28 chr15 48746592 48746876 -54748098 - L1Md_F3 LINE L1 -6005 719 425 3 956 10985 138 23 22 chr15 48746873 48749598 -54745376 - L1VL1 LINE L1 -801 2897 173 3 956 207 139 0 0 chr15 48749709 48749745 -54745229 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 956 184 0 97 0 chr15 48749931 48749962 -54745012 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 3 956 5663 74 16 21 chr15 48750727 48751502 -54743472 + L1Md_F2 LINE L1 5811 6581 -1 3 956 255 202 36 0 chr15 48751524 48751592 -54743382 + L1M5 LINE L1 5457 5528 -916 3 956 591 347 83 12 chr15 48751884 48752138 -54742836 + B4A SINE B4 6 277 -15 3 956 194 391 43 0 chr15 48752707 48752799 -54742175 + MIRc SINE MIR 56 151 -117 3 956 25 31 0 0 chr15 48752940 48752972 -54742002 + AT_rich Low_complexity Low_complexity 1 32 0 3 956 189 0 0 0 chr15 48753372 48753393 -54741581 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 3 956 310 275 180 6 chr15 48753486 48753658 -54741316 - L1MC2 LINE L1 -11 6333 6132 3 956 235 200 61 15 chr15 48753692 48753758 -54741216 + Lx7 LINE L1 7627 7695 -1 3 956 436 332 107 17 chr15 48753780 48754071 -54740903 - L1MC2 LINE L1 -220 6124 5808 3 956 304 22 0 43 chr15 48754071 48754118 -54740856 + (TCC)n Simple_repeat Simple_repeat 3 47 0 3 956 838 144 71 7 chr15 48754526 48754680 -54740294 + Lx2B LINE L1 6500 6663 -337 3 956 332 299 101 145 chr15 48754680 48755067 -54739907 - RLTR23 LTR ERV1 -53 377 8 3 956 489 323 42 24 chr15 48755222 48755390 -54739584 - MER44B DNA MER2_type -254 296 126 3 956 287 305 112 26 chr15 48755518 48755679 -54739295 - Lx8 LINE L1 -3 7470 7300 3 956 842 0 10 0 chr15 48755679 48755777 -54739197 + (CA)n Simple_repeat Simple_repeat 2 100 0 3 956 287 305 112 26 chr15 48755777 48755847 -54739127 - Lx8 LINE L1 -174 7299 7220 3 956 420 355 5 16 chr15 48755883 48756072 -54738902 - Lx8 LINE L1 -309 7164 6978 3 956 22 56 0 0 chr15 48757118 48757154 -54737820 + AT_rich Low_complexity Low_complexity 1 36 0 3 956 21 0 0 0 chr15 48757600 48757621 -54737353 + AT_rich Low_complexity Low_complexity 1 21 0 3 956 748 240 115 0 chr15 48757621 48757804 -54737170 - B3 SINE B2 -11 205 2 3 956 1077 171 57 5 chr15 48758484 48758696 -54736278 - URR1B DNA MER1_type -2 223 1 3 957 2303 182 2 0 chr15 48759137 48759609 -54735365 - L1_Mur1 LINE L1 -2588 3298 2826 3 957 226 98 23 47 chr15 48759726 48759769 -54735205 - RLTR25A LTR ERVK -245 783 742 3 957 1242 174 42 8 chr15 48759821 48760082 -54734892 - RLTR25B LTR ERVK -204 824 555 3 957 2291 165 31 24 chr15 48760081 48760502 -54734472 - RLTR23 LTR ERV1 -6 424 1 3 957 2455 180 125 60 chr15 48760502 48761100 -54733874 - RLTR25A LTR ERVK -466 637 1 3 957 8713 98 31 7 chr15 48761507 48762794 -54732180 + Lx3_Mus LINE L1 5678 6986 -23 3 957 297 0 0 0 chr15 48762794 48762827 -54732147 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 3 957 8713 97 31 6 chr15 48762827 48762839 -54732135 + Lx3_Mus LINE L1 6987 6995 -14 3 957 22 0 0 0 chr15 48762982 48763004 -54731970 + AT_rich Low_complexity Low_complexity 1 22 0 3 957 258 32 0 0 chr15 48763015 48763046 -54731928 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 957 249 325 0 0 chr15 48763097 48763177 -54731797 - BC1_Mm scRNA scRNA -67 85 6 3 957 276 91 0 0 chr15 48763485 48763529 -54731445 + (T)n Simple_repeat Simple_repeat 1 44 0 3 957 1857 59 0 0 chr15 48763645 48763884 -54731090 - L1Md_A LINE L1 0 6582 6344 3 957 1791 74 0 0 chr15 48763884 48764113 -54730861 + L1Md_F2 LINE L1 6104 6332 -250 3 957 483 302 30 50 chr15 48764419 48764621 -54730353 - B3A SINE B2 0 198 1 3 957 195 114 0 0 chr15 48765389 48765424 -54729550 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 3 957 23 54 0 0 chr15 48765424 48765461 -54729513 + AT_rich Low_complexity Low_complexity 1 37 0 3 957 1952 262 34 24 chr15 48765461 48766069 -54728905 - Lx6 LINE L1 -8 7452 6454 3 957 218 125 25 0 chr15 48766069 48766109 -54728865 + (TAAAA)n Simple_repeat Simple_repeat 3 43 0 3 957 252 264 0 54 chr15 48766130 48766183 -54728791 + T-rich Low_complexity Low_complexity 40 89 0 4 957 1010 140 0 6 chr15 48766183 48766363 -54728611 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 4 957 699 229 14 0 chr15 48766367 48766511 -54728463 - B1_Mur4 SINE Alu 0 150 5 4 957 252 264 0 54 chr15 48766511 48766544 -54728430 + T-rich Low_complexity Low_complexity 8 39 0 4 957 192 40 0 0 chr15 48767195 48767220 -54727754 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 957 495 0 0 0 chr15 48767220 48767274 -54727700 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 957 456 314 33 0 chr15 48767382 48767503 -54727471 + RMER20B LTR ERVK 1 125 -502 4 957 379 294 99 16 chr15 48767717 48767838 -54727136 + RMER20B LTR ERVK 217 347 -280 4 957 495 240 162 29 chr15 48767941 48768151 -54726823 - RMER20B LTR ERVK -47 469 245 4 957 25 65 0 0 chr15 48768307 48768353 -54726621 + AT_rich Low_complexity Low_complexity 1 46 0 4 957 384 40 0 0 chr15 48770638 48770688 -54724286 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 4 957 196 335 107 61 chr15 48770695 48770956 -54724018 + L4 LINE RTE 1745 2017 -12 4 957 26 0 0 0 chr15 48770959 48770985 -54723989 + AT_rich Low_complexity Low_complexity 1 26 0 4 957 3696 264 68 63 chr15 48771641 48772154 -54722820 - Lx6 LINE L1 -2 7458 6893 4 957 579 29 0 0 chr15 48772154 48772223 -54722751 + (TC)n Simple_repeat Simple_repeat 2 70 0 4 957 273 57 0 0 chr15 48772224 48772259 -54722715 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 957 3696 264 68 63 chr15 48772259 48772271 -54722703 - Lx6 LINE L1 -568 6892 6881 4 957 609 55 36 18 chr15 48772271 48772381 -54722593 + (CAGAGA)n Simple_repeat Simple_repeat 3 114 0 4 957 3696 264 68 63 chr15 48772381 48772468 -54722506 - Lx6 LINE L1 -580 6880 6801 4 957 862 21 20 34 chr15 48772468 48772614 -54722360 + (TCTCC)n Simple_repeat Simple_repeat 2 145 0 4 957 3696 264 68 63 chr15 48772614 48773246 -54721728 - Lx6 LINE L1 -660 6800 6204 4 957 416 208 9 0 chr15 48773269 48773375 -54721599 + (TATG)n Simple_repeat Simple_repeat 4 110 0 4 957 303 318 162 27 chr15 48773679 48774044 -54720930 + L1M5 LINE L1 4245 4658 -1488 4 957 728 205 0 0 chr15 48774624 48774751 -54720223 + B1_Mur3 SINE Alu 10 136 -13 4 957 24 0 0 0 chr15 48775003 48775027 -54719947 + AT_rich Low_complexity Low_complexity 1 24 0 4 957 217 232 18 0 chr15 48775192 48775248 -54719726 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 957 607 120 8 33 chr15 48775775 48775896 -54719078 - BC1_Mm scRNA scRNA -28 124 7 4 957 772 0 41 0 chr15 48775920 48776018 -54718956 + (TTTA)n Simple_repeat Simple_repeat 3 104 0 4 957 1174 76 0 0 chr15 48776019 48776176 -54718798 - B2_Mm2 SINE B2 -37 158 2 4 957 22 0 0 0 chr15 48776844 48776866 -54718108 + AT_rich Low_complexity Low_complexity 1 22 0 4 957 999 162 11 0 chr15 48776943 48777122 -54717852 + B2_Mm1t SINE B2 2 182 -11 4 957 1034 110 65 11 chr15 48777156 48777340 -54717634 + B2_Mm2 SINE B2 2 195 0 4 957 518 302 103 20 chr15 48778244 48778497 -54716477 - Lx8 LINE L1 0 7473 7200 4 957 459 0 0 0 chr15 48778747 48778798 -54716176 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 957 237 300 58 39 chr15 48779956 48780060 -54714914 - RMER20B LTR ERVK -38 589 484 4 957 530 300 54 58 chr15 48780101 48780377 -54714597 - RMER20B LTR ERVK -263 364 90 4 957 1982 290 135 63 chr15 48780619 48781383 -54713591 - Lx6 LINE L1 -27 7433 6675 4 957 5784 49 4 0 chr15 48781383 48782092 -54712882 + L1Md_F2 LINE L1 5869 6580 -2 4 957 1982 290 135 63 chr15 48782092 48782568 -54712406 - Lx6 LINE L1 -786 6674 6104 4 957 375 23 0 0 chr15 48782575 48782619 -54712355 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 4 957 1138 189 14 5 chr15 48782620 48782843 -54712131 + L1_Mur3 LINE L1 5277 5501 -379 4 957 244 333 0 0 chr15 48782836 48782920 -54712054 + Lx4A LINE L1 5933 6016 -1042 4 957 422 364 6 0 chr15 48783047 48783186 -54711788 + B1_Mur1 SINE Alu 2 147 -2 4 957 223 408 27 40 chr15 48783223 48783371 -54711603 + B1F SINE Alu 1 146 -3 4 957 390 74 0 0 chr15 48783856 48783910 -54711064 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 957 360 59 0 0 chr15 48785297 48785348 -54709626 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 957 274 189 0 18 chr15 48787001 48787114 -54707860 + (TA)n Simple_repeat Simple_repeat 1 111 0 4 957 187 244 44 0 chr15 48787426 48787471 -54707503 - MIRc SINE MIR -137 131 85 4 957 616 345 32 18 chr15 48787843 48788126 -54706848 - B4A SINE B4 -2 290 4 4 957 555 122 0 0 chr15 48789852 48789942 -54705032 + (TCCC)n Simple_repeat Simple_repeat 3 92 0 4 957 1076 75 7 7 chr15 48789985 48790132 -54704842 + B1_Mus1 SINE Alu 2 148 0 4 957 189 0 0 0 chr15 48790134 48790155 -54704819 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 957 877 119 6 6 chr15 48791090 48791251 -54703723 + (TTTTC)n Simple_repeat Simple_repeat 2 162 0 4 957 973 111 0 0 chr15 48791252 48791387 -54703587 - B1_Mus2 SINE Alu -12 135 1 4 957 26 50 0 0 chr15 48792066 48792106 -54702868 + AT_rich Low_complexity Low_complexity 1 40 0 4 957 279 319 0 0 chr15 48792829 48792901 -54702073 - MTE2b LTR MaLR -153 226 155 4 957 244 139 0 0 chr15 48793332 48793368 -54701606 + (T)n Simple_repeat Simple_repeat 1 36 0 4 957 198 118 0 0 chr15 48793593 48793627 -54701347 + (AGGGGG)n Simple_repeat Simple_repeat 6 39 0 4 957 706 215 7 7 chr15 48793691 48793827 -54701147 + B1_Mur4 SINE Alu 1 136 -14 4 957 2133 110 32 3 chr15 48794052 48794363 -54700611 + L1_Mm LINE L1 5483 5802 -81 4 957 585 215 83 7 chr15 48794384 48794529 -54700445 - Lx3C LINE L1 -3 6973 6818 4 957 340 336 52 15 chr15 48794652 48794788 -54700186 + MLT2B2 LTR ERVL 371 511 -51 4 957 323 302 165 33 chr15 48795205 48795448 -54699526 - LTR33 LTR ERVL -3 512 238 4 957 594 307 30 85 chr15 48795754 48796189 -54698785 + Lx9 LINE L1 7107 7517 -127 4 957 246 105 0 0 chr15 48796221 48796259 -54698715 + (GAAAA)n Simple_repeat Simple_repeat 4 41 0 4 957 2611 202 100 40 chr15 48796435 48797150 -54697824 + RMER19B LTR ERVK 1 890 -12 4 957 21 36 0 0 chr15 48797662 48797690 -54697284 + AT_rich Low_complexity Low_complexity 1 28 0 4 957 28 71 0 0 chr15 48797866 48797922 -54697052 + AT_rich Low_complexity Low_complexity 1 56 0 4 957 252 0 0 0 chr15 48797986 48798014 -54696960 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 4 957 1532 130 0 45 chr15 48798015 48798280 -54696694 - Lx3A LINE L1 -9 6972 6720 4 957 219 154 0 0 chr15 48799235 48799274 -54695700 + T-rich Low_complexity Low_complexity 1 39 0 4 957 1101 83 14 0 chr15 48799275 48799420 -54695554 - B1_Mm SINE Alu 0 147 1 4 957 1334 111 16 0 chr15 48799420 48799609 -54695365 - B2_Mm2 SINE B2 -2 193 1 4 957 264 365 57 67 chr15 48799646 48799943 -54695031 - MLT1D LTR MaLR 0 505 212 4 957 574 286 22 54 chr15 48800067 48800289 -54694685 - B3 SINE B2 -1 215 1 4 957 237 260 126 68 chr15 48802164 48802267 -54692707 + MER94 DNA AcHobo 22 130 -4 4 957 664 281 34 109 chr15 48802954 48803451 -54691523 + RLTR12B LTR ERVK 47 495 -73 4 957 2898 83 0 5 chr15 48803722 48804110 -54690864 + L1Md_F2 LINE L1 6185 6570 -12 4 957 724 271 80 0 chr15 48804681 48804880 -54690094 + B3 SINE B2 2 216 0 4 957 683 307 60 10 chr15 48805439 48805640 -54689334 - B3 SINE B2 0 216 6 4 957 495 0 0 0 chr15 48805789 48805844 -54689130 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 957 21 36 0 0 chr15 48805850 48805878 -54689096 + AT_rich Low_complexity Low_complexity 1 28 0 4 957 230 318 13 35 chr15 48805937 48806035 -54688939 - B4 SINE B4 -194 98 2 4 957 630 99 0 0 chr15 48806148 48806239 -54688735 + (TCTA)n Simple_repeat Simple_repeat 3 93 0 4 957 1050 82 0 0 chr15 48806993 48807127 -54687847 + B1_Mm SINE Alu 1 134 -13 4 957 298 302 51 34 chr15 48807166 48807344 -54687630 - L1MCa LINE L1 -5757 751 571 4 957 2589 186 102 51 chr15 48808402 48809013 -54685961 - RLTR26 LTR ERVK 0 642 1 4 957 13170 123 5 3 chr15 48809018 48810895 -54684079 - MERVK26-int LTR ERVK -3 6916 5035 4 957 1224 108 0 0 chr15 48810897 48811063 -54683911 + MERVK26-int LTR ERVK 3594 3759 -3160 4 957 2238 99 3 0 chr15 48811049 48811372 -54683602 - MERVK26-int LTR ERVK -3376 3543 3220 4 957 533 138 0 0 chr15 48811370 48811450 -54683524 - MERVK26-int LTR ERVK -4786 2133 2054 4 957 1751 111 16 7 chr15 48811450 48811771 -54683203 + MTB LTR MaLR 101 419 0 4 957 5498 158 36 2 chr15 48811771 48812723 -54682251 - Lx2B LINE L1 -170 6830 5847 4 957 9984 121 36 2 chr15 48812729 48814354 -54680620 - L1_Mur1 LINE L1 -281 5605 3926 4 957 16499 166 53 43 chr15 48814371 48816847 -54678127 - Lx2 LINE L1 -1 6996 4401 4 957 230 263 105 81 chr15 48816847 48816971 -54678003 - MLT1E3 LTR MaLR -335 289 163 4 957 16499 166 53 43 chr15 48816971 48817853 -54677121 - Lx2 LINE L1 -1 4400 3475 4 957 396 0 0 0 chr15 48817853 48817897 -54677077 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 957 504 0 0 0 chr15 48817897 48817952 -54677022 + (GA)n Simple_repeat Simple_repeat 1 56 0 4 957 16499 178 54 46 chr15 48817952 48819282 -54675692 - Lx2 LINE L1 -2412 3474 2135 4 957 1963 219 35 15 chr15 48819282 48819742 -54675232 - RMER13B LTR ERVK 0 908 440 4 957 4192 189 53 8 chr15 48819742 48820604 -54674370 - Lx2B LINE L1 -45 5832 4932 4 957 38772 37 1 6 chr15 48822214 48828388 -54666586 - L1Md_T LINE L1 0 6582 445 4 957 24 0 0 0 chr15 48829017 48829041 -54665933 + AT_rich Low_complexity Low_complexity 1 24 0 4 957 21 36 0 0 chr15 48829749 48829777 -54665197 + AT_rich Low_complexity Low_complexity 1 28 0 4 957 3743 88 9 27 chr15 48829784 48830332 -54664642 - L1Md_F2 LINE L1 -10 6572 6035 4 957 15473 176 17 26 chr15 48830333 48832538 -54662436 + Lx LINE L1 2127 4279 -1607 4 957 1067 207 73 117 chr15 48832538 48832949 -54662025 + RLTR9C LTR ERVK 1 393 0 4 957 15473 176 17 26 chr15 48832949 48833277 -54661697 + Lx LINE L1 4280 4636 -1250 4 957 306 0 0 0 chr15 48833277 48833311 -54661663 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 4 957 11084 164 15 15 chr15 48833311 48835332 -54659642 + Lx LINE L1 4631 6654 0 4 957 1364 194 56 51 chr15 48835721 48836095 -54658879 - L1_Mur2 LINE L1 -2062 3815 3440 4 957 3665 87 0 16 chr15 48836112 48836613 -54658361 - L1_Mus2 LINE L1 -1 6565 6073 4 957 7099 82 12 1 chr15 48836614 48837562 -54657412 + L1_Mus1 LINE L1 5608 6565 -2 4 957 228 256 33 0 chr15 48837603 48837693 -54657281 + L1_Mur3 LINE L1 5779 5871 -9 5 957 1181 293 85 22 chr15 48837698 48837985 -54656989 + Lx7 LINE L1 7022 7320 -376 5 957 261 0 0 0 chr15 48837985 48838014 -54656960 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 957 1181 294 90 19 chr15 48838014 48838363 -54656611 + Lx7 LINE L1 7111 7635 -61 5 957 1062 254 119 7 chr15 48839709 48839994 -54654980 - MTC LTR MaLR 0 421 105 5 957 1530 89 43 0 chr15 48839996 48840231 -54654743 + MusHAL1 LINE L1 248 492 -2220 5 957 1022 76 21 0 chr15 48840248 48840392 -54654582 + L1_Mus3 LINE L1 5783 5929 -709 5 957 408 286 29 0 chr15 48840392 48840497 -54654477 - MTC LTR MaLR -262 108 1 5 957 282 231 163 49 chr15 48840522 48840645 -54654329 + MTE2a LTR MaLR 243 379 0 5 957 807 350 118 25 chr15 48840646 48841206 -54653768 + MTE2a-int LTR MaLR 2 613 -645 5 957 407 287 45 59 chr15 48841266 48841488 -54653486 + MTE2a-int LTR MaLR 884 1102 -156 5 957 192 77 0 0 chr15 48841529 48841555 -54653419 + (TATATG)n Simple_repeat Simple_repeat 5 30 0 5 957 234 128 0 0 chr15 48841555 48841593 -54653381 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 957 875 280 5 14 chr15 48841822 48842036 -54652938 - B3 SINE B2 -3 213 2 5 957 1084 186 13 13 chr15 48842249 48842473 -54652501 + URR1B DNA MER1_type 1 224 -1 5 957 441 0 0 0 chr15 48842488 48842537 -54652437 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 5 957 737 355 56 70 chr15 48843133 48843439 -54651535 - Lx9 LINE L1 -618 7026 6728 5 957 2621 98 66 0 chr15 48843439 48843835 -54651139 + BGLII_Mus LTR ERVK 1 422 0 5 957 737 355 56 70 chr15 48843835 48844245 -54650729 - Lx9 LINE L1 -917 6727 6320 5 957 22 35 0 0 chr15 48844517 48844546 -54650428 + AT_rich Low_complexity Low_complexity 1 29 0 5 957 496 306 7 7 chr15 48845305 48845450 -54649524 - B1_Mur2 SINE Alu 0 149 5 5 957 31 0 0 0 chr15 48845477 48845508 -54649466 + AT_rich Low_complexity Low_complexity 1 31 0 5 957 6291 139 33 12 chr15 48845509 48846550 -54648424 - Lx3A LINE L1 -4 6977 5914 5 957 963 106 0 0 chr15 48846550 48846692 -54648282 + (TTCC)n Simple_repeat Simple_repeat 3 144 0 5 957 6291 139 33 12 chr15 48846692 48846737 -54648237 - Lx3A LINE L1 -1068 5913 5869 5 957 369 294 162 73 chr15 48846860 48847051 -54647923 - B3 SINE B2 0 216 9 5 957 1119 76 0 0 chr15 48847065 48847210 -54647764 - B1_Mm SINE Alu 0 147 3 5 957 186 43 0 0 chr15 48847394 48847417 -54647557 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 957 7085 109 14 0 chr15 48847417 48848481 -54646493 - L1_Mus3 LINE L1 -15 6623 5525 5 957 16556 119 10 38 chr15 48848472 48848656 -54646318 + L1_Mm LINE L1 2825 3005 -2878 5 957 814 110 7 0 chr15 48848656 48848792 -54646182 + L1_Mus2 LINE L1 6428 6564 -2 5 957 16556 119 10 38 chr15 48848792 48850261 -54644713 + L1_Mm LINE L1 3006 4400 -1483 5 957 2671 73 12 0 chr15 48850261 48850603 -54644371 + ORR1A1 LTR MaLR 1 346 0 5 957 16556 119 10 38 chr15 48850603 48851496 -54643478 + L1_Mm LINE L1 4401 5299 -584 5 957 2555 84 13 31 chr15 48851496 48851878 -54643096 + L1Md_F2 LINE L1 6197 6571 -11 5 957 16556 119 10 38 chr15 48851878 48852126 -54642848 + L1_Mm LINE L1 5300 5542 -341 5 957 224 155 56 0 chr15 48852198 48852269 -54642705 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 957 195 129 0 0 chr15 48852757 48852788 -54642186 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 5 957 7933 182 22 130 chr15 48852923 48853805 -54641169 - L1VL4 LINE L1 -2564 3322 2472 5 957 975 80 72 0 chr15 48853805 48853943 -54641031 - B1_Mus1 SINE Alu 0 148 1 5 957 7933 182 22 130 chr15 48853943 48854737 -54640237 - L1VL4 LINE L1 -3415 2471 1914 5 957 1553 26 0 15 chr15 48854737 48854933 -54640041 + L1Md_F3 LINE L1 6379 6571 -13 5 957 7933 185 25 88 chr15 48854933 48856061 -54638913 - L1VL4 LINE L1 -3973 1913 773 5 957 2521 179 12 3 chr15 48856065 48856914 -54638060 - L1VL4 LINE L1 -2196 1363 510 5 957 25 95 0 0 chr15 48857464 48857538 -54637436 + AT_rich Low_complexity Low_complexity 1 74 0 5 957 332 253 10 10 chr15 48857703 48857799 -54637175 + L1M4 LINE L1 88 183 -6359 5 957 289 269 131 46 chr15 48858159 48858334 -54636640 + L1M4 LINE L1 549 738 -5804 5 957 4396 209 50 33 chr15 48858353 48859660 -54635314 - L1_Mur3 LINE L1 -727 5153 3837 5 957 32 0 0 0 chr15 48859660 48859692 -54635282 + AT_rich Low_complexity Low_complexity 1 32 0 5 957 8141 165 30 21 chr15 48859692 48861388 -54633586 - Lx4A LINE L1 -1 7057 5353 5 957 4293 116 40 0 chr15 48861388 48862041 -54632933 - Lx2 LINE L1 -2 6995 6317 5 957 5339 156 20 54 chr15 48862041 48862539 -54632435 - Lx4A LINE L1 -525 5352 4853 5 957 34301 79 1 4 chr15 48862521 48868814 -54626160 - L1Md_F2 LINE L1 0 6582 306 5 957 13409 189 111 12 chr15 48868815 48871401 -54623573 - Lx4A LINE L1 -991 4886 1990 5 957 3023 99 63 76 chr15 48871401 48871927 -54623047 + MURVY-LTR LTR ERV1 1 519 0 5 957 13409 189 111 12 chr15 48871927 48872606 -54622368 - Lx4A LINE L1 -3888 1989 1299 5 957 831 249 12 24 chr15 48872575 48872826 -54622148 - L1VL4 LINE L1 -5512 790 543 5 957 28 0 0 0 chr15 48873218 48873246 -54621728 + AT_rich Low_complexity Low_complexity 1 28 0 5 957 27 0 0 0 chr15 48873619 48873646 -54621328 + AT_rich Low_complexity Low_complexity 1 27 0 5 957 321 68 0 0 chr15 48874284 48874328 -54620646 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 957 542 291 40 0 chr15 48874328 48874476 -54620498 - B3A SINE B2 -44 154 1 5 957 25 0 0 0 chr15 48874712 48874737 -54620237 + AT_rich Low_complexity Low_complexity 1 25 0 5 957 4900 170 24 28 chr15 48875191 48876145 -54618829 + RMER17B LTR ERVK 5 954 -4 5 957 570 109 0 0 chr15 48876253 48876354 -54618620 + (CA)n Simple_repeat Simple_repeat 2 102 0 5 957 546 277 85 58 chr15 48876486 48876674 -54618300 + B3A SINE B2 6 198 0 5 957 235 330 9 9 chr15 48876683 48876790 -54618184 + GA-rich Low_complexity Low_complexity 3 109 0 5 957 360 0 0 0 chr15 48877272 48877312 -54617662 + (TAAAA)n Simple_repeat Simple_repeat 2 41 0 5 957 253 197 0 16 chr15 48877580 48877642 -54617332 - Lx LINE L1 -6 6994 6934 5 957 28825 104 7 16 chr15 48877699 48880071 -54614903 - L1_Mus1 LINE L1 -1 6566 4193 5 957 432 0 0 0 chr15 48880071 48880119 -54614855 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 957 28825 124 10 22 chr15 48880119 48882308 -54612666 - L1_Mus1 LINE L1 -1691 4192 2023 5 957 2872 66 29 0 chr15 48882308 48882685 -54612289 - RLTR10 LTR ERVK -2 388 1 5 957 28825 124 10 22 chr15 48882685 48883031 -54611943 - L1_Mus1 LINE L1 -3861 2022 1722 5 957 1193 41 0 0 chr15 48883031 48883176 -54611798 - B1_Mus2 SINE Alu 0 147 3 5 957 28825 143 35 12 chr15 48883176 48884250 -54610724 - L1_Mus1 LINE L1 -4162 1721 612 5 957 2840 187 90 4 chr15 48884250 48884786 -54610188 - Lx LINE L1 -14 6640 6059 5 957 678 231 20 7 chr15 48884953 48885101 -54609873 - B1_Mur4 SINE Alu 0 150 1 5 957 495 0 0 0 chr15 48885678 48885733 -54609241 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 957 384 302 130 59 chr15 48885734 48885903 -54609071 - B3A SINE B2 -16 182 2 5 957 306 134 0 0 chr15 48887373 48887440 -54607534 + (A)n Simple_repeat Simple_repeat 1 67 0 5 957 31 44 0 0 chr15 48888030 48888075 -54606899 + AT_rich Low_complexity Low_complexity 1 45 0 5 957 2935 153 8 6 chr15 48888083 48888575 -54606399 - Lx3A LINE L1 0 6981 6489 5 957 5124 121 16 3 chr15 48888575 48889555 -54605419 - Lx3A LINE L1 -891 6090 5094 5 957 224 111 0 0 chr15 48889566 48889602 -54605372 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 5 957 318 134 0 0 chr15 48889611 48889678 -54605296 + (T)n Simple_repeat Simple_repeat 1 67 0 5 957 1135 88 0 0 chr15 48889678 48889825 -54605149 - B1_Mus1 SINE Alu 0 148 2 5 119 827 109 0 8 chr15 48889825 48889954 -54605020 - Lx3A LINE L1 -770 5116 4989 5 958 231 318 108 31 chr15 48890208 48890338 -54604636 + MLT1A1 LTR MaLR 48 187 -221 5 958 489 318 26 26 chr15 48890875 48891069 -54603905 + B3A SINE B2 5 198 0 5 958 1294 283 87 51 chr15 48891084 48891717 -54603257 + RCHARR1 DNA MER1_type 239 894 -80 5 958 1004 193 182 18 chr15 48892081 48892236 -54602738 + L1_Mur3 LINE L1 5557 5712 -168 5 958 1792 162 27 27 chr15 48892236 48892604 -54602370 + RLTR9A LTR ERVK 1 368 0 5 958 1004 193 182 18 chr15 48892604 48892723 -54602251 + L1_Mur3 LINE L1 5713 5876 -4 5 958 12899 78 0 4 chr15 48892732 48895126 -54599848 - L1Md_F2 LINE L1 -12 6570 4184 5 958 1432 266 54 24 chr15 48895126 48895535 -54599439 + Lx6 LINE L1 6921 7341 -119 5 958 29 28 0 0 chr15 48895846 48895882 -54599092 + AT_rich Low_complexity Low_complexity 1 36 0 5 958 252 267 27 0 chr15 48896159 48896234 -54598740 - Lx7 LINE L1 -447 7249 7173 5 958 555 313 30 30 chr15 48896225 48896449 -54598525 + Lx7 LINE L1 6948 7182 -514 5 958 353 362 43 18 chr15 48896659 48896822 -54598152 + B3 SINE B2 45 211 -5 5 958 244 336 5 13 chr15 48898981 48899075 -54595899 + MLT1E1 LTR MaLR 396 495 -185 5 958 27 29 0 0 chr15 48899419 48899453 -54595521 + AT_rich Low_complexity Low_complexity 1 34 0 5 958 291 28 0 0 chr15 48899583 48899619 -54595355 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 958 3442 33 0 0 chr15 48899731 48900127 -54594847 - MTA_Mm LTR MaLR 0 396 1 5 958 25 0 0 0 chr15 48900247 48900272 -54594702 + AT_rich Low_complexity Low_complexity 1 25 0 5 958 1572 148 7 11 chr15 48900272 48900545 -54594429 - Lx2 LINE L1 -1 6996 6725 5 958 653 292 79 0 chr15 48901167 48901345 -54593629 - B3 SINE B2 -22 194 3 5 958 435 253 0 0 chr15 48902779 48902933 -54592041 + (CA)n Simple_repeat Simple_repeat 1 154 0 5 958 600 315 81 20 chr15 48902991 48903237 -54591737 + Lx9 LINE L1 6394 6654 -990 5 958 259 253 40 13 chr15 48903305 48903381 -54591593 + MTE2b LTR MaLR 250 327 -52 5 958 700 253 76 8 chr15 48903628 48903891 -54591083 - L1M2 LINE L1 -691 5621 5341 5 958 6359 34 5 4 chr15 48904241 48905012 -54589962 + L1Md_F3 LINE L1 5799 6570 -14 5 958 6115 133 15 28 chr15 48905521 48906557 -54588417 + RLTR13D5 LTR ERVK 1 1023 0 5 958 229 204 0 0 chr15 48906986 48907030 -54587944 + ORR1E LTR MaLR 1 44 -335 5 958 342 61 0 0 chr15 48907030 48907079 -54587895 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 958 393 81 0 0 chr15 48907102 48907164 -54587810 + (GA)n Simple_repeat Simple_repeat 1 62 0 5 958 1642 222 46 19 chr15 48907174 48907590 -54587384 + Lx4B LINE L1 6622 7017 -41 5 958 265 296 28 0 chr15 48907732 48907840 -54587134 + (TA)n Simple_repeat Simple_repeat 1 111 0 5 958 29 0 0 0 chr15 48908214 48908243 -54586731 + AT_rich Low_complexity Low_complexity 1 29 0 5 958 384 363 22 7 chr15 48908894 48909030 -54585944 + B3A SINE B2 1 138 -60 5 958 258 216 0 0 chr15 48909033 48909084 -54585890 - BGLII_A LTR ERVK 0 445 395 5 958 933 236 20 31 chr15 48909087 48909383 -54585591 - BGLII_B LTR ERVK -2 439 127 5 958 22 0 0 0 chr15 48909451 48909473 -54585501 + AT_rich Low_complexity Low_complexity 1 22 0 5 958 247 286 0 0 chr15 48909622 48909685 -54585289 - MTEa LTR MaLR -31 348 286 5 958 315 128 0 0 chr15 48909732 48909779 -54585195 - L1_Mus2 LINE L1 -392 6174 6128 6 958 495 0 0 0 chr15 48909797 48909852 -54585122 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 958 2630 213 21 14 chr15 48910516 48911079 -54583895 - Lx5 LINE L1 -556 6494 5928 6 958 358 288 79 109 chr15 48911085 48911350 -54583624 + ORR1E LTR MaLR 61 317 -42 5 958 189 0 0 0 chr15 48911922 48911943 -54583031 + (A)n Simple_repeat Simple_repeat 1 21 0 6 958 22 0 0 0 chr15 48912412 48912434 -54582540 + AT_rich Low_complexity Low_complexity 1 22 0 6 958 1604 157 112 7 chr15 48912569 48912864 -54582110 - ORR1A3 LTR MaLR 0 326 1 6 958 28 0 0 0 chr15 48913512 48913540 -54581434 + AT_rich Low_complexity Low_complexity 1 28 0 6 958 266 250 8 41 chr15 48913631 48913752 -54581222 + A-rich Low_complexity Low_complexity 2 118 0 6 958 24 0 0 0 chr15 48914226 48914250 -54580724 + AT_rich Low_complexity Low_complexity 1 24 0 6 958 6731 81 90 0 chr15 48914754 48915753 -54579221 + L1_Mus3 LINE L1 5546 6626 -12 6 958 1729 83 4 0 chr15 48916223 48916487 -54578487 + MusHAL1 LINE L1 1822 2086 -626 6 958 255 31 0 0 chr15 48916560 48916592 -54578382 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 6 958 1103 267 82 41 chr15 48916750 48916813 -54578161 - MTC LTR MaLR -65 356 276 6 958 4512 128 39 64 chr15 48916813 48917628 -54577346 + Lx2A LINE L1 6214 7008 0 6 958 1103 267 82 41 chr15 48917628 48917646 -54577328 - MTC LTR MaLR -146 275 264 6 958 4696 122 52 18 chr15 48917646 48918505 -54576469 + RMER17D LTR ERVK 1 889 0 6 958 1103 267 82 41 chr15 48918505 48918762 -54576212 - MTC LTR MaLR -158 263 3 6 958 334 310 137 12 chr15 48918779 48919027 -54575947 - MERVL_2A-int LTR ERVL -56 5701 5423 6 958 509 227 32 33 chr15 48919076 48919282 -54575692 - Lx7 LINE L1 -5 7691 7319 6 958 2634 323 77 26 chr15 48919622 48919772 -54575202 - MERVL_2A-int LTR ERVL -713 5048 4900 6 958 2806 107 21 19 chr15 48919772 48920192 -54574782 + BGLII LTR ERVK 1 421 0 6 958 2634 323 77 26 chr15 48920192 48921254 -54573720 - MERVL_2A-int LTR ERVL -862 4899 3775 6 958 1014 339 62 38 chr15 48921432 48922364 -54572610 - MERVL_2A-int LTR ERVL -4603 1158 138 6 958 313 317 40 77 chr15 48922488 48922761 -54572213 - MT2A LTR ERVL -2 531 269 6 958 414 198 17 25 chr15 48922979 48923098 -54571876 + L1_Mus3 LINE L1 6517 6634 -4 6 958 811 139 13 0 chr15 48923125 48923276 -54571698 + MusHAL1 LINE L1 1344 1496 -1216 6 958 2065 132 15 3 chr15 48923276 48923603 -54571371 + Lx LINE L1 6317 6647 -7 6 958 300 53 0 0 chr15 48923635 48923673 -54571301 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 958 438 267 40 33 chr15 48924118 48924162 -54570812 + L1VL4 LINE L1 573 617 -5902 6 958 2576 89 0 72 chr15 48924162 48924549 -54570425 + RLTR10D LTR ERVK 1 359 0 6 958 3304 163 14 8 chr15 48924549 48925701 -54569273 + L1VL4 LINE L1 515 1620 -2197 6 958 36812 34 3 8 chr15 48925702 48931112 -54563862 + L1Md_A LINE L1 203 5586 -297 6 958 8383 32 0 1 chr15 48931112 48932109 -54562865 + L1Md_A LINE L1 5587 6582 0 6 958 10101 129 11 8 chr15 48932109 48933809 -54561165 + L1VL4 LINE L1 1611 3316 -501 6 958 6747 140 20 9 chr15 48933802 48934936 -54560038 + L1_Mm LINE L1 4603 5749 -134 6 958 6351 63 10 7 chr15 48934936 48935801 -54559173 - RLTR13A3 LTR ERVK 0 978 111 6 958 5710 122 16 1 chr15 48935809 48936689 -54558285 + L1_Mus3 LINE L1 5743 6635 -3 6 958 317 201 65 59 chr15 48937376 48937399 -54557575 - Lx9 LINE L1 -2 7642 7620 6 958 6665 111 28 25 chr15 48937399 48938419 -54556555 - RLTR13D5 LTR ERVK 0 1023 1 6 958 317 201 65 59 chr15 48938419 48938548 -54556426 - Lx9 LINE L1 -25 7619 7489 6 958 534 343 14 28 chr15 48939013 48939229 -54555745 - Lx8 LINE L1 -233 7240 7028 6 958 270 179 0 0 chr15 48939441 48939497 -54555477 + GA-rich Low_complexity Low_complexity 1 56 0 6 958 776 299 78 28 chr15 48939507 48939827 -54555147 + Lx8 LINE L1 6194 6529 -944 6 958 31084 27 0 0 chr15 48940240 48946815 -54548159 - L1Md_T LINE L1 0 6585 1 6 958 183 42 0 0 chr15 48946819 48946843 -54548131 + (T)n Simple_repeat Simple_repeat 1 24 0 6 958 1104 68 7 7 chr15 48948727 48948874 -54546100 - B1_Mm SINE Alu 0 147 1 6 958 1563 229 21 19 chr15 48949078 48949451 -54545523 - ORR1D1 LTR MaLR 0 374 1 6 958 228 86 0 0 chr15 48950141 48950176 -54544798 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 958 6459 207 28 3 chr15 48950756 48952077 -54542897 + Lx4B LINE L1 5674 7027 -31 6 958 461 246 0 7 chr15 48952086 48952221 -54542753 + GA-rich Low_complexity Low_complexity 2 135 0 6 958 227 280 114 61 chr15 48952461 48952575 -54542399 - B1F SINE Alu -6 143 24 6 958 306 327 27 0 chr15 48953483 48953593 -54541381 + B1F SINE Alu 32 144 -5 6 958 4810 185 123 53 chr15 48953980 48955196 -54539778 + Lx2B LINE L1 5690 6991 -9 6 958 257 77 51 0 chr15 48955661 48955700 -54539274 + MTB_Mm LTR MaLR 1 41 -366 6 958 225 120 57 57 chr15 48955764 48955817 -54539157 - L1_Rod LINE L1 -635 5212 5160 6 958 22 0 0 0 chr15 48955866 48955888 -54539086 + AT_rich Low_complexity Low_complexity 1 22 0 6 958 30 69 0 0 chr15 48956067 48956125 -54538849 + AT_rich Low_complexity Low_complexity 1 58 0 6 958 24 0 0 0 chr15 48956161 48956185 -54538789 + AT_rich Low_complexity Low_complexity 1 24 0 6 958 7427 30 1 0 chr15 48956245 48957119 -54537855 + L1Md_T LINE L1 5707 6581 -1 6 958 378 319 62 5 chr15 48957190 48957385 -54537589 - B3 SINE B2 -10 206 1 6 958 24 53 0 0 chr15 48959203 48959241 -54535733 + AT_rich Low_complexity Low_complexity 1 38 0 6 958 205 220 20 0 chr15 48959269 48959319 -54535655 - L3 LINE CR1 -2118 2371 2321 6 958 21 0 0 0 chr15 48960166 48960187 -54534787 + AT_rich Low_complexity Low_complexity 1 21 0 6 958 882 267 80 55 chr15 48960191 48960741 -54534233 + L1_Rod LINE L1 4502 5065 -782 6 958 24 53 0 0 chr15 48961491 48961529 -54533445 + AT_rich Low_complexity Low_complexity 1 38 0 6 958 423 273 70 0 chr15 48961982 48962110 -54532864 + L1MC LINE L1 4092 4228 -1918 6 958 25 105 0 0 chr15 48962970 48963065 -54531909 + AT_rich Low_complexity Low_complexity 1 95 0 6 958 4057 54 81 0 chr15 48963159 48963677 -54531297 + LTRIS2 LTR ERV1 5 564 0 6 958 21 0 0 0 chr15 48963701 48963722 -54531252 + AT_rich Low_complexity Low_complexity 1 21 0 6 958 258 191 44 0 chr15 48963789 48963857 -54531117 + A-rich Low_complexity Low_complexity 1 71 0 6 958 486 231 19 0 chr15 48964177 48964285 -54530689 + RMER1B Other Other 599 708 -358 6 958 794 251 6 0 chr15 48964423 48964586 -54530388 + RMER1C Other Other 70 233 -1109 6 958 1542 231 72 38 chr15 48964584 48964975 -54529999 + Lx2B LINE L1 6574 6977 -23 6 958 6564 101 35 3 chr15 48965410 48966367 -54528607 + Lx3_Mus LINE L1 6005 6991 -18 6 958 261 0 0 0 chr15 48966368 48966397 -54528577 + (TTAA)n Simple_repeat Simple_repeat 2 30 0 6 958 464 87 0 0 chr15 48966401 48966470 -54528504 - RMER19C LTR ERVK -542 69 1 6 958 31 26 0 0 chr15 48966719 48966757 -54528217 + AT_rich Low_complexity Low_complexity 1 38 0 6 958 242 87 22 0 chr15 48966854 48966900 -54528074 + (CAA)n Simple_repeat Simple_repeat 2 48 0 6 958 348 314 48 82 chr15 48967082 48967352 -54527622 - L1M4 LINE L1 -5464 1078 818 6 958 483 286 51 42 chr15 48967365 48967602 -54527372 - L1M4 LINE L1 -5792 750 512 6 958 21 0 0 0 chr15 48968791 48968812 -54526162 + AT_rich Low_complexity Low_complexity 1 21 0 6 958 21 36 0 0 chr15 48970189 48970217 -54524757 + AT_rich Low_complexity Low_complexity 1 28 0 6 958 1590 223 234 16 chr15 48972559 48973047 -54521927 - RMER19B LTR ERVK -2 900 307 6 958 12026 126 8 2 chr15 48973143 48975052 -54519922 + L1_Mur1 LINE L1 3966 5886 0 6 958 504 0 0 0 chr15 48975720 48975776 -54519198 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 958 643 94 23 16 chr15 48976042 48976171 -54518803 + (TAGA)n Simple_repeat Simple_repeat 3 132 0 6 958 300 27 0 0 chr15 48976258 48976295 -54518679 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 958 756 256 41 23 chr15 48977960 48978180 -54516794 - URR1B DNA MER1_type -1 224 1 6 958 21 0 0 0 chr15 48978974 48978995 -54515979 + AT_rich Low_complexity Low_complexity 1 21 0 6 958 7791 97 47 11 chr15 48980217 48981421 -54513553 - RMER16-int LTR ERVK -856 4550 3303 6 958 4151 227 75 71 chr15 48981423 48982862 -54512112 - RMER16-int LTR ERVK -3902 3504 1415 6 958 549 106 12 12 chr15 48983005 48983091 -54511883 - RLTR41 LTR ERV1 0 446 361 6 958 368 253 139 56 chr15 48983092 48983272 -54511702 - RLTR41 LTR ERV1 -251 195 1 6 958 896 222 0 46 chr15 48983277 48983471 -54511503 - RMER16-int LTR ERVK -3894 1512 1328 6 958 4495 146 74 44 chr15 48983520 48984663 -54510311 - RMER16-int LTR ERVK -3975 1431 192 6 958 3760 74 70 37 chr15 48984891 48985437 -54509537 + LTRIS2 LTR ERV1 1 564 0 6 958 334 301 58 25 chr15 48986024 48986204 -54508770 - B3A SINE B2 -15 201 1 6 958 1526 139 7 42 chr15 48986442 48986727 -54508247 + RLTR10A LTR ERVK 137 411 0 6 958 557 51 0 0 chr15 48987144 48987223 -54507751 + L1_Mus3 LINE L1 6553 6631 -7 6 958 881 137 6 28 chr15 48987226 48987406 -54507568 + GA-rich Low_complexity Low_complexity 3 178 0 6 958 198 0 0 0 chr15 48987503 48987525 -54507449 + (A)n Simple_repeat Simple_repeat 1 22 0 6 958 518 354 81 24 chr15 48987885 48988131 -54506843 - MT2A LTR ERVL -128 405 146 6 958 26 50 0 0 chr15 48988254 48988294 -54506680 + AT_rich Low_complexity Low_complexity 1 40 0 6 958 2371 195 84 8 chr15 48988523 48989096 -54505878 + RMER6C LTR ERVK 1 688 -2 6 958 423 0 0 0 chr15 48990633 48990680 -54504294 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 958 7814 142 19 30 chr15 48990714 48992688 -54502286 - Lx3B LINE L1 0 6973 5048 6 958 201 74 0 0 chr15 48992836 48992863 -54502111 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 958 497 241 26 58 chr15 48992906 48993060 -54501914 + Lx7 LINE L1 6850 6998 -698 6 958 532 218 64 46 chr15 48993057 48993230 -54501744 + Lx7 LINE L1 7371 7546 -150 6 958 1429 275 82 58 chr15 48993229 48993827 -54501147 - Lx7 LINE L1 -207 7489 6878 6 958 727 11 22 0 chr15 48994091 48994183 -54500791 + (TC)n Simple_repeat Simple_repeat 2 95 0 6 958 1391 108 23 9 chr15 48994195 48994410 -54500564 + RMER16-int LTR ERVK 5189 5406 0 6 958 1876 196 59 17 chr15 48994445 48994849 -54500125 + RMER16 LTR ERVK 113 533 0 6 958 595 332 76 46 chr15 48994870 48995132 -54499842 - ORR1D2 LTR MaLR -100 270 1 6 958 1977 105 14 3 chr15 48996276 48996563 -54498411 - L1_Mus1 LINE L1 -1 6566 6277 6 958 21 0 0 0 chr15 48996921 48996942 -54498032 + AT_rich Low_complexity Low_complexity 1 21 0 7 958 249 329 115 6 chr15 48997085 48997250 -54497724 + Lx8 LINE L1 6587 6769 -704 7 958 1180 300 77 22 chr15 48997257 48997751 -54497223 + Lx8 LINE L1 6945 7465 -8 7 958 1144 236 43 21 chr15 48997971 48998252 -54496722 + Lx6 LINE L1 7173 7459 -1 7 958 211 72 23 23 chr15 48998322 48998365 -54496609 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 7 958 741 79 10 0 chr15 48998369 48998470 -54496504 - B1_Mus2 SINE Alu 0 147 46 7 958 822 125 0 0 chr15 48998731 48998875 -54496099 + (TAGA)n Simple_repeat Simple_repeat 4 147 0 7 958 252 0 0 0 chr15 48998875 48998902 -54496072 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 958 4628 53 5 0 chr15 48999093 48999673 -54495301 - L1Md_F2 LINE L1 0 6582 6000 7 958 23 0 0 0 chr15 48999768 48999791 -54495183 + AT_rich Low_complexity Low_complexity 1 23 0 7 958 1040 147 48 14 chr15 48999793 49000000 -54494974 - L1_Mur2 LINE L1 -3450 2427 2214 7 958 2067 135 48 11 chr15 49000052 49000405 -54494569 - Lx LINE L1 0 6654 6289 1 958 2455 77 236 26 chr15 49000405 49000858 -54494116 - RLTR6_Mm LTR ERV1 -70 584 37 2 958 66273 16 20 1 chr15 49000968 49008596 -54486378 - RLTR6-int LTR ERV1 0 7778 1 2 958 2560 84 226 25 chr15 49008596 49009070 -54485904 - RLTR6_Mm LTR ERV1 -49 605 37 3 958 505 150 50 0 chr15 49009180 49009260 -54485714 - Lx LINE L1 -363 6291 6208 1 958 2496 194 39 33 chr15 49009235 49009265 -54485709 - L1_Mur3 LINE L1 -3670 2210 2178 4 958 979 140 11 43 chr15 49009265 49009452 -54485522 - Lx LINE L1 -3 6651 6471 5 958 2496 194 39 33 chr15 49009452 49010060 -54484914 - L1_Mur3 LINE L1 -3703 2177 1569 4 958 8957 175 41 41 chr15 49010048 49010426 -54484548 + L1_Mur2 LINE L1 2900 3263 -2614 6 958 1743 151 3 3 chr15 49010426 49010719 -54484255 + Lx LINE L1 6362 6654 0 7 958 8957 175 41 41 chr15 49010719 49012337 -54482637 + L1_Mur2 LINE L1 3264 4897 -980 6 958 268 277 42 118 chr15 49012351 49012613 -54482361 - L1_Mur3 LINE L1 -4093 1787 1546 8 958 1456 259 15 20 chr15 49012611 49013020 -54481954 + Lx4B LINE L1 6640 7046 -12 9 958 259 284 75 51 chr15 49013061 49013292 -54481682 - L1_Rod LINE L1 -4345 1502 1269 1 958 3748 34 2 0 chr15 49013292 49013738 -54481236 - L1Md_T LINE L1 0 6582 6136 1 958 259 284 75 51 chr15 49013738 49013799 -54481175 - L1_Rod LINE L1 -4579 1268 1204 1 958 348 77 0 0 chr15 49013901 49013953 -54481021 + (T)n Simple_repeat Simple_repeat 1 52 0 1 958 28 29 0 0 chr15 49014508 49014543 -54480431 + AT_rich Low_complexity Low_complexity 1 35 0 1 958 228 111 0 0 chr15 49015019 49015055 -54479919 + (TC)n Simple_repeat Simple_repeat 2 37 0 1 958 262 167 56 0 chr15 49015056 49015128 -54479846 + (TA)n Simple_repeat Simple_repeat 1 76 0 1 958 207 0 0 0 chr15 49016496 49016519 -54478455 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 1 958 225 319 13 13 chr15 49016554 49016713 -54478261 + L1MD LINE L1 2890 3048 -3098 1 958 44 56 0 0 chr15 49016796 49016868 -54478106 + AT_rich Low_complexity Low_complexity 1 72 0 1 958 357 141 36 60 chr15 49017045 49017128 -54477846 + HAL1-3A_ME LINE L1 1947 2027 -831 1 958 228 200 0 0 chr15 49017136 49017206 -54477768 + (CA)n Simple_repeat Simple_repeat 1 70 0 2 958 654 270 58 5 chr15 49017378 49017583 -54477391 - B3 SINE B2 0 216 1 2 958 4020 94 22 67 chr15 49018190 49018441 -54476533 + Lx3_Mus LINE L1 5273 5523 -363 2 958 2937 32 3 0 chr15 49018441 49018786 -54476188 - ORR1A0 LTR MaLR 0 346 1 2 958 4020 94 22 67 chr15 49018786 49018857 -54476117 + Lx3_Mus LINE L1 5524 5579 -307 2 958 1050 110 0 0 chr15 49018857 49019003 -54475971 + B1_Mus1 SINE Alu 2 147 -1 2 958 242 0 61 0 chr15 49019003 49019036 -54475938 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2 958 9650 93 31 3 chr15 49019036 49020451 -54474523 + Lx3_Mus LINE L1 5580 7007 -2 2 119 2487 130 59 38 chr15 49020468 49020940 -54474034 + RLTR45 LTR ERVK 1 482 0 2 959 378 0 0 0 chr15 49021628 49021670 -54473304 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 2 959 2729 90 7 65 chr15 49024164 49024592 -54470382 + RLTR9D LTR ERVK 1 403 0 2 959 344 346 14 49 chr15 49025232 49025375 -54469599 + RSINE1 SINE B4 26 163 -2 2 959 3384 28 4 136 chr15 49025527 49026029 -54468945 + RLTR10C LTR ERVK 1 436 0 3 959 1431 62 0 0 chr15 49026029 49026207 -54468767 + RLTR10-int LTR ERVK 1 178 -7403 3 959 305 127 55 44 chr15 49026298 49026389 -54468585 + GA-rich Low_complexity Low_complexity 3 94 0 3 959 346 89 0 0 chr15 49026389 49026434 -54468540 + RLTR10-int LTR ERVK 93 137 -6405 3 959 1975 9 9 4 chr15 49026437 49026670 -54468304 + RLTR10-int LTR ERVK 652 885 -1102 3 959 1798 47 0 4 chr15 49026639 49026872 -54468102 + MMERVK10C-int LTR ERVK 3512 3743 -3838 3 959 5798 30 0 0 chr15 49026865 49027531 -54467443 + MMERVK10C-int LTR ERVK 4790 5455 -2126 3 959 642 89 0 0 chr15 49028783 49028873 -54466101 + (TG)n Simple_repeat Simple_repeat 1 90 0 3 959 373 357 68 48 chr15 49028930 49029456 -54465518 + L1MC4a LINE L1 7346 7882 0 3 959 594 71 33 56 chr15 49030523 49030703 -54464271 + T-rich Low_complexity Low_complexity 3 178 0 3 959 1012 110 14 0 chr15 49030714 49030860 -54464114 - B1_Mus1 SINE Alu 0 148 1 3 959 270 136 0 0 chr15 49031391 49031435 -54463539 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 959 267 220 0 48 chr15 49032253 49032315 -54462659 + RMER10A LTR ERVL 364 422 -20 3 959 766 266 33 33 chr15 49032317 49032558 -54462416 + ORR1C2-int LTR MaLR 1114 1354 -16 3 959 1097 236 97 0 chr15 49032611 49032870 -54462104 + ORR1C2 LTR MaLR 100 383 -1 3 959 311 311 90 20 chr15 49033324 49033524 -54461450 + B3 SINE B2 2 215 -1 4 959 26 98 0 0 chr15 49034355 49034437 -54460537 + AT_rich Low_complexity Low_complexity 1 82 0 4 959 395 321 0 9 chr15 49035312 49035425 -54459549 + ORR1E LTR MaLR 1 112 -247 4 959 1108 269 55 63 chr15 49035419 49035784 -54459190 - ORR1D1 LTR MaLR -10 364 3 4 959 1402 293 68 64 chr15 49035811 49036519 -54458455 - RCHARR1 DNA MER1_type -256 718 8 4 959 487 324 98 44 chr15 49036613 49036910 -54458064 - MT2A LTR ERVL -11 590 278 4 959 656 156 32 24 chr15 49036960 49037085 -54457889 - MT2A LTR ERVL -407 126 1 4 959 2679 193 15 31 chr15 49039385 49039477 -54455497 + Lx5 LINE L1 1962 2051 -3826 4 959 366 23 0 0 chr15 49039477 49039520 -54455454 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 959 2679 193 15 31 chr15 49039520 49040043 -54454931 + Lx5 LINE L1 2052 2566 -3311 4 959 579 144 0 0 chr15 49040042 49040139 -54454835 + Lx5 LINE L1 4387 4483 -1394 4 959 4155 170 67 66 chr15 49040137 49040378 -54454596 - L1_Mm LINE L1 -588 5295 5110 4 959 1099 89 7 0 chr15 49040378 49040524 -54454450 - B1_Mus1 SINE Alu 0 148 2 4 959 4155 170 67 66 chr15 49040524 49040951 -54454023 - L1_Mm LINE L1 -774 5109 4644 4 959 192 40 0 0 chr15 49040951 49040976 -54453998 + (TTG)n Simple_repeat Simple_repeat 2 26 0 5 959 4155 170 67 66 chr15 49040976 49041246 -54453728 - L1_Mm LINE L1 -1240 4643 4356 4 959 517 184 0 35 chr15 49041246 49041359 -54453615 + Lx2 LINE L1 6882 6990 -7 5 959 246 95 0 0 chr15 49041361 49041403 -54453571 + (CAAAT)n Simple_repeat Simple_repeat 2 43 0 5 959 6823 133 7 10 chr15 49041403 49042653 -54452321 + Lx LINE L1 5406 6651 -3 5 959 3126 216 135 24 chr15 49042627 49044111 -54450863 + Lx5 LINE L1 4450 6142 -908 4 959 3641 192 55 41 chr15 49044164 49044754 -54450220 - Lx4A LINE L1 -104 6954 6339 5 959 1192 54 0 0 chr15 49044754 49044901 -54450073 + B1_Mus2 SINE Alu 1 147 0 5 959 3641 192 55 41 chr15 49044901 49045099 -54449875 - Lx4A LINE L1 -720 6338 6155 5 959 27 62 0 0 chr15 49045262 49045310 -54449664 + AT_rich Low_complexity Low_complexity 1 48 0 5 959 496 152 11 11 chr15 49046967 49047060 -54447914 - RLTR15 LTR ERVK 0 359 267 5 959 1184 97 0 82 chr15 49047070 49047357 -54447617 - L1_Mur1 LINE L1 -2740 3146 2908 5 959 4949 85 13 3 chr15 49047342 49048029 -54446945 - Lx3_Mus LINE L1 -102 6907 6214 5 959 4451 142 51 0 chr15 49048026 49048714 -54446260 - L1VL4 LINE L1 -5552 750 28 6 959 370 125 0 59 chr15 49048745 49048813 -54446161 - RLTR15 LTR ERVK -290 69 6 5 959 8853 138 4 8 chr15 49048944 49048958 -54446016 - Lx3A LINE L1 -1 6980 6967 6 959 315 0 0 0 chr15 49048958 49048993 -54445981 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 6 959 8853 138 4 8 chr15 49048993 49050056 -54444918 - Lx3A LINE L1 -15 6966 5909 6 959 459 0 0 0 chr15 49050056 49050107 -54444867 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 6 959 8853 138 12 7 chr15 49050107 49050527 -54444447 - Lx3A LINE L1 -1073 5908 5491 6 959 288 53 0 0 chr15 49050527 49050565 -54444409 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 6 959 3400 139 40 2 chr15 49050565 49050709 -54444265 - Lx3A LINE L1 -396 5490 5325 6 959 3947 90 2 0 chr15 49050709 49051241 -54443733 + L1_Mus2 LINE L1 6034 6566 0 6 959 3400 139 40 2 chr15 49051241 49051253 -54443721 - Lx3A LINE L1 -562 5324 5313 6 959 243 0 0 0 chr15 49051270 49051297 -54443677 + (T)n Simple_repeat Simple_repeat 1 27 0 6 959 761 119 42 7 chr15 49051299 49051443 -54443531 - L1_Mus3 LINE L1 -3 6635 6487 6 959 596 296 138 22 chr15 49051454 49051730 -54443244 + MTD LTR MaLR 104 411 -8 6 959 6340 141 19 30 chr15 49053231 49054122 -54440852 - Lx LINE L1 -1 6653 5792 6 959 270 0 0 0 chr15 49054122 49054152 -54440822 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 7 959 6340 157 28 12 chr15 49054152 49054665 -54440309 - Lx LINE L1 -92 5791 5259 6 959 1614 176 0 0 chr15 49054659 49054949 -54440025 + L1_Mur2 LINE L1 4953 5242 -635 7 959 334 207 146 57 chr15 49054949 49055072 -54439902 - B4 SINE B4 -64 228 95 7 959 429 70 0 0 chr15 49055572 49055629 -54439345 + (CA)n Simple_repeat Simple_repeat 2 58 0 7 959 1116 70 0 0 chr15 49055633 49055776 -54439198 - B1_Mm SINE Alu -2 145 3 7 959 41 21 0 0 chr15 49055952 49056000 -54438974 + AT_rich Low_complexity Low_complexity 1 48 0 7 959 35 54 0 0 chr15 49056329 49056385 -54438589 + AT_rich Low_complexity Low_complexity 1 56 0 7 959 402 21 0 0 chr15 49056610 49056657 -54438317 + (TTA)n Simple_repeat Simple_repeat 2 48 0 7 959 923 189 51 0 chr15 49056662 49056837 -54438137 - Lx3B LINE L1 -3 6970 6787 7 959 938 176 34 39 chr15 49057234 49057441 -54437533 + Lx3B LINE L1 6763 6968 -5 7 959 1111 82 7 0 chr15 49057946 49058093 -54436881 + B1_Mus1 SINE Alu 1 148 0 8 959 1276 306 18 0 chr15 49058634 49058974 -54436000 - MTD LTR MaLR -73 346 1 8 959 183 156 0 0 chr15 49059081 49059113 -54435861 + (TATG)n Simple_repeat Simple_repeat 1 32 0 8 959 562 311 67 26 chr15 49059336 49059645 -54435329 + MLT1A0 LTR MaLR 1 322 -43 8 959 32 0 0 0 chr15 49059845 49059877 -54435097 + AT_rich Low_complexity Low_complexity 1 32 0 8 959 22 0 0 0 chr15 49059946 49059968 -54435006 + AT_rich Low_complexity Low_complexity 1 22 0 8 959 2717 184 14 10 chr15 49060130 49060628 -54434346 - Lx2B LINE L1 -4 6996 6497 8 959 262 125 0 0 chr15 49060630 49060670 -54434304 + Lx2B LINE L1 5990 6029 -968 8 959 1485 187 39 68 chr15 49060670 49061159 -54433815 + RLTR41 LTR ERV1 1 429 -17 8 959 2260 182 30 2 chr15 49061159 49061599 -54433375 + Lx2B LINE L1 6034 6485 -515 8 959 1885 118 39 63 chr15 49061786 49062120 -54432854 - ORR1A3 LTR MaLR 0 326 1 8 959 31 0 0 0 chr15 49062406 49062437 -54432537 + AT_rich Low_complexity Low_complexity 1 31 0 9 959 23 33 0 0 chr15 49062880 49062910 -54432064 + AT_rich Low_complexity Low_complexity 1 30 0 9 959 5988 64 1 3 chr15 49063056 49063825 -54431149 - L1Md_F2 LINE L1 -13 6569 5802 9 959 4924 21 0 0 chr15 49063825 49064391 -54430583 + L1Md_F2 LINE L1 5201 5766 -117 9 959 1354 198 105 54 chr15 49065481 49065654 -54429320 + RMER17C LTR ERVK 2 184 -226 9 959 662 0 13 0 chr15 49065654 49065732 -54429242 + (TC)n Simple_repeat Simple_repeat 2 80 0 9 959 1354 198 105 54 chr15 49065732 49065947 -54429027 + RMER17C LTR ERVK 185 410 0 9 959 4655 196 49 21 chr15 49066117 49066852 -54428122 + L1_Mur2 LINE L1 1310 2046 -3831 9 959 555 85 0 0 chr15 49066852 49066934 -54428040 + (CA)n Simple_repeat Simple_repeat 2 83 0 9 959 180 111 0 0 chr15 49066943 49066970 -54428004 + (CCA)n Simple_repeat Simple_repeat 3 29 0 9 959 4655 196 49 21 chr15 49066970 49067389 -54427585 + L1_Mur2 LINE L1 2056 2505 -3372 9 959 991 157 162 20 chr15 49067389 49067636 -54427338 - RMER6C LTR ERVK -406 284 3 9 959 872 211 19 0 chr15 49067639 49067848 -54427126 + L1_Mur2 LINE L1 4952 5164 -713 9 959 238 207 54 62 chr15 49068291 49068420 -54426554 - Lx9 LINE L1 0 7644 7517 9 959 24 53 0 0 chr15 49068438 49068476 -54426498 + AT_rich Low_complexity Low_complexity 1 38 0 1 959 675 236 7 71 chr15 49068515 49068670 -54426304 - B1_Mm SINE Alu 0 147 3 1 959 261 315 73 136 chr15 49068670 49068718 -54426256 - B4 SINE B4 -218 74 39 1 959 1143 107 96 0 chr15 49068718 49068887 -54426087 + Lx LINE L1 6029 6214 -440 1 959 1797 161 3 3 chr15 49068887 49069192 -54425782 + Lx LINE L1 6349 6653 -1 1 959 21 57 0 0 chr15 49069293 49069328 -54425646 + AT_rich Low_complexity Low_complexity 1 35 0 1 959 25 0 0 0 chr15 49069426 49069451 -54425523 + AT_rich Low_complexity Low_complexity 1 25 0 1 959 34 24 0 0 chr15 49069669 49069710 -54425264 + AT_rich Low_complexity Low_complexity 1 41 0 1 959 5246 155 55 0 chr15 49069767 49070678 -54424296 - Lx2 LINE L1 0 6997 6037 1 959 2861 102 4 74 chr15 49070701 49071189 -54423785 + Lx2 LINE L1 5587 6040 -957 1 959 445 295 78 37 chr15 49071356 49071574 -54423400 - Lx8 LINE L1 0 7473 7247 1 959 1508 164 4 15 chr15 49072076 49072348 -54422626 - Lx2A1 LINE L1 -9 6999 6731 1 959 256 355 63 11 chr15 49072462 49072653 -54422321 + L2 LINE L2 815 1015 -2404 1 959 408 125 0 0 chr15 49073036 49073100 -54421874 + (CATA)n Simple_repeat Simple_repeat 4 67 0 1 959 3388 134 0 17 chr15 49073124 49073663 -54421311 - Lx3A LINE L1 -6 6975 6446 1 959 4135 157 91 34 chr15 49073663 49074575 -54420399 + RMER17B LTR ERVK 1 954 -4 1 959 1803 126 4 0 chr15 49074586 49074856 -54420118 - Lx3A LINE L1 -530 6451 6181 1 959 2349 131 16 5 chr15 49074856 49075240 -54419734 + Lx3_Mus LINE L1 5756 6143 -866 1 959 2992 69 8 5 chr15 49075295 49075688 -54419286 - MTA_Mm LTR MaLR 0 396 3 1 959 3979 141 126 19 chr15 49075690 49076471 -54418503 - MTA_Mm-int LTR MaLR 0 1258 395 1 959 1154 235 29 60 chr15 49077083 49077535 -54417439 + L1_Mur3 LINE L1 859 1296 -6432 1 959 5360 206 255 63 chr15 49077505 49079120 -54415854 + L1_Mur3 LINE L1 2827 4919 -961 1 959 561 76 0 0 chr15 49079120 49079199 -54415775 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 1 959 5360 206 255 63 chr15 49079199 49079249 -54415725 + L1_Mur3 LINE L1 4920 4972 -908 1 959 1075 72 0 0 chr15 49079249 49079387 -54415587 + B1_Mm SINE Alu 1 138 -9 1 959 189 0 0 0 chr15 49079387 49079408 -54415566 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 959 5360 206 255 63 chr15 49079408 49080301 -54414673 + L1_Mur3 LINE L1 4973 5878 -2 1 959 37115 7 0 36 chr15 49080367 49085615 -54409359 + L1Md_A LINE L1 1 5033 -850 1 959 1626 26 0 0 chr15 49085615 49085808 -54409166 - MT2_Mm LTR ERVL 0 493 301 1 959 37115 7 0 36 chr15 49085808 49086383 -54408591 + L1Md_A LINE L1 5034 5586 -297 1 959 9008 3 0 0 chr15 49086383 49087379 -54407595 + L1Md_A LINE L1 5587 6582 0 1 959 28 0 0 0 chr15 49087858 49087886 -54407088 + AT_rich Low_complexity Low_complexity 1 28 0 1 959 21 0 0 0 chr15 49088845 49088866 -54406108 + AT_rich Low_complexity Low_complexity 1 21 0 1 959 383 378 8 0 chr15 49089010 49089137 -54405837 - RSINE1 SINE B4 -37 128 1 1 959 247 77 0 119 chr15 49089425 49089484 -54405490 + L1_Mus1 LINE L1 6516 6567 0 1 959 639 273 30 71 chr15 49089488 49089685 -54405289 + MTD LTR MaLR 68 256 -163 1 959 351 0 0 0 chr15 49089721 49089760 -54405214 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 959 25 51 0 0 chr15 49090705 49090744 -54404230 + AT_rich Low_complexity Low_complexity 1 39 0 1 959 21 0 0 0 chr15 49091230 49091251 -54403723 + AT_rich Low_complexity Low_complexity 1 21 0 1 959 621 0 0 0 chr15 49091896 49091965 -54403009 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 1 959 689 74 0 10 chr15 49091965 49092061 -54402913 - B1_Mus2 SINE Alu -9 138 44 1 959 262 173 74 74 chr15 49091999 49092080 -54402894 - RLTR25B LTR ERVK -519 509 429 1 959 203 169 0 30 chr15 49092837 49092904 -54402070 + (CAAA)n Simple_repeat Simple_repeat 2 66 0 1 959 252 234 0 181 chr15 49093110 49093204 -54401770 - RSINE1 SINE B4 0 165 89 1 959 23 33 0 0 chr15 49093312 49093342 -54401632 + AT_rich Low_complexity Low_complexity 1 30 0 1 959 2949 77 12 2 chr15 49094340 49094757 -54400217 - BGLII LTR ERVK 0 421 1 1 959 1417 217 105 6 chr15 49095170 49095494 -54399480 + ORR1B2 LTR MaLR 4 359 -8 1 959 216 97 0 0 chr15 49095584 49095615 -54399359 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 959 290 361 20 59 chr15 49095662 49095815 -54399159 + MTE-int LTR MaLR 1395 1541 -39 1 959 6597 135 24 8 chr15 49096685 49098108 -54396866 - Lx LINE L1 -3 6651 5205 1 959 6575 113 27 25 chr15 49098106 49099782 -54395192 - L1VL2 LINE L1 -1596 2019 334 1 959 8053 37 20 1 chr15 49100281 49101256 -54393718 - L1Md_F2 LINE L1 -2 6580 5587 1 959 426 254 18 0 chr15 49101574 49101743 -54393231 + CT-rich Low_complexity Low_complexity 2 173 0 1 959 462 287 33 13 chr15 49102014 49102166 -54392808 + Lx8 LINE L1 6781 6935 -538 1 959 304 352 33 38 chr15 49102307 49102490 -54392484 + Lx8 LINE L1 7165 7346 -127 1 959 27 29 0 0 chr15 49102557 49102591 -54392383 + AT_rich Low_complexity Low_complexity 1 34 0 1 959 1387 219 110 55 chr15 49102653 49103127 -54391847 - RLTR11A LTR ERVK -28 500 1 1 959 258 375 10 0 chr15 49103489 49103593 -54391381 - B4A SINE B4 -20 272 168 1 959 1301 331 54 17 chr15 49104452 49105027 -54389947 + Lx8 LINE L1 6256 6851 -622 1 959 1621 180 11 0 chr15 49105247 49105530 -54389444 + ORR1A1 LTR MaLR 1 286 -60 1 959 993 251 55 41 chr15 49105560 49105851 -54389123 + ORR1C1 LTR MaLR 84 378 0 1 959 861 194 0 0 chr15 49107247 49107422 -54387552 + CT-rich Low_complexity Low_complexity 2 176 0 1 959 229 233 17 0 chr15 49107423 49107483 -54387491 - B1_Mus2 SINE Alu 0 147 87 1 959 593 313 65 73 chr15 49107504 49107921 -54387053 + BGLII_B LTR ERVK 20 424 -17 1 959 4565 141 218 15 chr15 49109413 49110339 -54384635 + RLTR13D3 LTR ERVK 1 1114 0 1 959 324 295 62 8 chr15 49110727 49110857 -54384117 - L1MA7 LINE L1 -353 5938 5802 1 959 2517 219 38 119 chr15 49110911 49111653 -54383321 - RMER1B Other Other -11 1055 374 1 959 1508 201 7 16 chr15 49111668 49111972 -54383002 - RLTR10E LTR ERVK -10 301 1 1 959 260 186 0 0 chr15 49111972 49112015 -54382959 - RMER1A Other Other -969 61 19 1 959 280 265 60 12 chr15 49112352 49112436 -54382538 - RMER20B LTR ERVK -26 601 514 1 959 1508 167 23 0 chr15 49112434 49112697 -54382277 - RMER6C LTR ERVK -421 269 1 1 959 21 0 0 0 chr15 49113450 49113471 -54381503 + AT_rich Low_complexity Low_complexity 1 21 0 1 959 295 352 80 0 chr15 49113471 49113596 -54381378 + MTE2a LTR MaLR 1 135 -244 1 959 404 283 0 42 chr15 49113560 49113678 -54381296 + MT2A LTR ERVL 100 212 -321 1 959 804 194 6 28 chr15 49113704 49113884 -54381090 + Lx5 LINE L1 5786 5961 -1089 1 959 40790 10 2 6 chr15 49113885 49119472 -54375502 + L1Md_A LINE L1 422 5982 -600 1 959 829 11 0 0 chr15 49119795 49119887 -54375087 + L1Md_A LINE L1 5493 5584 -299 1 959 8859 12 0 0 chr15 49119889 49120885 -54374089 + L1Md_A LINE L1 5587 6582 0 1 959 4163 211 55 46 chr15 49120885 49121844 -54373130 + Lx5 LINE L1 5948 6915 -135 1 959 903 105 0 0 chr15 49121901 49122034 -54372940 + (TAGA)n Simple_repeat Simple_repeat 4 136 0 1 959 26 30 0 0 chr15 49122473 49122506 -54372468 + AT_rich Low_complexity Low_complexity 1 33 0 1 959 6680 204 29 6 chr15 49123050 49124404 -54370570 - Lx3C LINE L1 -5 6971 5587 1 959 4538 48 5 2 chr15 49124457 49125024 -54369950 - L1Md_F2 LINE L1 0 6585 6017 1 959 40537 13 2 6 chr15 49125024 49131215 -54363759 - L1Md_A LINE L1 -5 6577 416 1 959 30819 78 56 25 chr15 49131214 49136967 -54358007 - L1Md_F2 LINE L1 -552 6033 102 1 959 6045 233 38 45 chr15 49136965 49138356 -54356618 - L1_Mur3 LINE L1 -858 5022 3604 1 959 980 111 28 0 chr15 49138356 49138500 -54356474 + B1_Mus1 SINE Alu 1 148 0 1 959 6045 233 38 45 chr15 49138500 49138813 -54356161 - L1_Mur3 LINE L1 -2277 3603 3327 1 959 194 62 31 0 chr15 49138813 49138845 -54356129 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 959 6045 233 38 45 chr15 49138845 49139078 -54355896 - L1_Mur3 LINE L1 -2554 3326 3099 1 959 1203 93 39 0 chr15 49140942 49141124 -54353850 + B2_Mm2 SINE B2 2 190 -5 1 959 187 312 47 0 chr15 49141581 49141645 -54353329 - L2a LINE L2 -11 3415 3349 1 959 1012 108 0 39 chr15 49142005 49142159 -54352815 + B1_Mus1 SINE Alu 1 148 0 1 959 22 0 0 0 chr15 49142211 49142233 -54352741 + AT_rich Low_complexity Low_complexity 1 22 0 1 959 5563 190 41 35 chr15 49142593 49143926 -54351048 - Lx5 LINE L1 -811 5066 3725 1 959 882 181 12 0 chr15 49143925 49144091 -54350883 + Lx5 LINE L1 5180 5347 -530 1 959 6772 115 35 8 chr15 49144089 49145107 -54349867 + Lx LINE L1 5602 6647 -7 1 959 1579 209 12 12 chr15 49145122 49145452 -54349522 + Lx5 LINE L1 5350 5679 -198 1 959 4611 261 56 12 chr15 49145453 49146623 -54348351 + Lx5 LINE L1 5824 7045 -5 1 959 23 33 0 0 chr15 49146746 49146776 -54348198 + AT_rich Low_complexity Low_complexity 1 30 0 1 959 309 343 48 75 chr15 49147732 49147959 -54347015 + L1ME2 LINE L1 5939 6159 -5 1 959 22 70 0 0 chr15 49148670 49148713 -54346261 + AT_rich Low_complexity Low_complexity 1 43 0 1 959 185 266 105 11 chr15 49148717 49148812 -54346162 - L3b LINE CR1 -319 163 60 1 959 877 218 17 0 chr15 49148941 49149115 -54345859 + URR1A DNA MER1_type 50 226 0 1 959 2287 93 1 27 chr15 49150046 49150426 -54344548 - L1_Mus3 LINE L1 -202 6364 6000 1 959 2177 92 7 3 chr15 49150426 49150733 -54344241 + L1_Mus3 LINE L1 6331 6638 0 1 959 528 16 0 0 chr15 49151649 49151710 -54343264 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 959 28 48 0 0 chr15 49151805 49151847 -54343127 + AT_rich Low_complexity Low_complexity 1 42 0 1 960 3501 151 15 1 chr15 49152141 49152839 -54342135 - Lx4A LINE L1 -867 6191 5479 1 960 2023 196 38 15 chr15 49152837 49153236 -54341738 - Lx4A LINE L1 -6268 818 411 1 960 460 319 27 74 chr15 49153236 49153385 -54341589 - B3A SINE B2 -43 155 14 1 960 749 195 29 17 chr15 49153695 49153867 -54341107 + Lx3B LINE L1 6796 6969 -4 1 960 24 53 0 0 chr15 49153876 49153914 -54341060 + AT_rich Low_complexity Low_complexity 1 38 0 1 960 200 253 25 12 chr15 49153973 49154053 -54340921 + (TATATG)n Simple_repeat Simple_repeat 3 83 0 1 960 320 300 50 0 chr15 49154098 49154178 -54340796 + ORR1D2 LTR MaLR 3 86 -273 1 960 3143 22 3 3 chr15 49154179 49154546 -54340428 + IAPLTR1_Mm LTR ERVK 1 367 0 1 960 24631 33 30 14 chr15 49154546 49157566 -54337408 + IAPEz-int LTR ERVK 8 3076 -3405 1 960 7313 27 3 1 chr15 49157552 49158402 -54336572 + IAPEz-int LTR ERVK 5630 6481 0 1 960 3143 22 3 3 chr15 49158402 49158769 -54336205 + IAPLTR1_Mm LTR ERVK 1 367 0 1 960 1369 229 73 62 chr15 49158835 49159189 -54335785 - ORR1B2 LTR MaLR -8 359 2 1 960 437 332 133 38 chr15 49159192 49159402 -54335572 + ORR1D2 LTR MaLR 131 360 -10 1 960 3400 32 4 132 chr15 49159472 49159972 -54335002 - RLTR10C LTR ERVK 0 436 1 1 960 30 0 0 0 chr15 49160368 49160398 -54334576 + AT_rich Low_complexity Low_complexity 1 30 0 1 960 5284 133 19 12 chr15 49161565 49162424 -54332550 + Lx2 LINE L1 6133 6997 0 2 960 5596 62 0 3 chr15 49162519 49163236 -54331738 - L1Md_F2 LINE L1 0 6582 5868 2 960 4310 46 2 0 chr15 49163237 49163760 -54331214 + L1Md_F2 LINE L1 5360 5883 0 2 960 23 0 0 0 chr15 49164094 49164117 -54330857 + AT_rich Low_complexity Low_complexity 1 23 0 2 960 3536 205 37 3 chr15 49164117 49164874 -54330100 - Lx3C LINE L1 -2 6974 6192 2 960 1002 23 15 8 chr15 49165480 49165614 -54329360 + (TATATG)n Simple_repeat Simple_repeat 3 137 0 2 960 234 91 0 0 chr15 49165962 49165995 -54328979 + (T)n Simple_repeat Simple_repeat 1 33 0 2 960 1202 55 0 0 chr15 49165998 49166143 -54328831 - B1_Mm SINE Alu -1 146 2 2 960 197 89 48 48 chr15 49166550 49166633 -54328341 + (TCTA)n Simple_repeat Simple_repeat 2 84 0 2 960 221 200 56 0 chr15 49167500 49167590 -54327384 + (TA)n Simple_repeat Simple_repeat 1 95 0 2 960 261 293 32 16 chr15 49167747 49167872 -54327102 - Lx6 LINE L1 -23 7437 7311 2 960 608 296 43 70 chr15 49167887 49168214 -54326760 + RLTR12B LTR ERVK 17 334 -194 2 960 325 326 75 40 chr15 49168233 49168485 -54326489 + RLTR12B LTR ERVK 237 497 -31 2 960 978 132 60 6 chr15 49168623 49168791 -54326183 + Lx4A LINE L1 4945 5121 -756 2 960 4114 141 70 7 chr15 49168791 49169548 -54325426 + RMER17D2 LTR ERVK 1 805 -4 2 960 6277 149 30 14 chr15 49169551 49171157 -54323817 + Lx4A LINE L1 5117 6765 -293 2 960 920 138 21 0 chr15 49171158 49171303 -54323671 + MT-int LTR MaLR 188 335 -763 2 960 2782 139 24 63 chr15 49171778 49172321 -54322653 + Lx3A LINE L1 6453 6974 -7 2 960 2324 136 27 61 chr15 49173478 49173923 -54321051 + RLTR23 LTR ERV1 1 430 0 2 960 302 306 78 43 chr15 49174674 49174790 -54320184 + HAL1-3A_ME LINE L1 2284 2403 -455 2 960 36 40 0 0 chr15 49175197 49175247 -54319727 + AT_rich Low_complexity Low_complexity 1 50 0 2 960 1124 78 0 23 chr15 49175623 49175794 -54319180 + L1Md_F3 LINE L1 6418 6584 0 2 960 22 80 0 0 chr15 49175949 49175999 -54318975 + AT_rich Low_complexity Low_complexity 1 50 0 2 960 217 186 23 0 chr15 49176800 49176843 -54318131 + (TATG)n Simple_repeat Simple_repeat 3 46 0 2 960 768 319 60 16 chr15 49177018 49177373 -54317601 - MTD LTR MaLR -8 411 1 2 960 544 325 122 15 chr15 49177778 49178187 -54316787 + L1MD LINE L1 4782 5234 -912 2 960 288 38 36 36 chr15 49178611 49178666 -54316308 + (CAAA)n Simple_repeat Simple_repeat 3 57 0 2 960 358 321 38 0 chr15 49179534 49179640 -54315334 - B1F SINE Alu -28 121 12 2 960 302 129 133 56 chr15 49179814 49179904 -54315070 - Lx9 LINE L1 0 7644 7548 2 960 37 0 0 0 chr15 49180241 49180278 -54314696 + AT_rich Low_complexity Low_complexity 1 37 0 2 960 413 328 111 55 chr15 49180482 49180789 -54314185 - LTR86B2 LTR ERVL -98 389 66 2 960 316 234 56 0 chr15 49184869 49184976 -54309998 - Lx LINE L1 -148 7496 7384 2 960 1073 209 142 8 chr15 49184980 49185226 -54309748 + Lx4A LINE L1 6779 7057 -1 2 960 255 348 5 33 chr15 49185294 49185478 -54309496 + (CATA)n Simple_repeat Simple_repeat 2 180 0 2 960 268 281 0 0 chr15 49185941 49186005 -54308969 - MTEa LTR MaLR -315 64 1 2 960 182 292 65 43 chr15 49186671 49186764 -54308210 + L3b LINE CR1 83 177 -305 2 960 298 295 17 35 chr15 49186907 49187023 -54307951 + L3b LINE CR1 176 289 -193 2 960 384 112 37 0 chr15 49187878 49187938 -54307036 - Lx LINE L1 -454 6113 6052 2 960 2831 185 16 11 chr15 49187950 49188507 -54306467 + Lx LINE L1 6095 6654 0 2 960 806 120 15 0 chr15 49188512 49188645 -54306329 + (GAAA)n Simple_repeat Simple_repeat 2 136 0 2 960 183 313 35 24 chr15 49189299 49189384 -54305590 + L2c LINE L2 3235 3320 -67 2 960 210 91 0 0 chr15 49189386 49189419 -54305555 + (TCTCTG)n Simple_repeat Simple_repeat 2 34 0 2 960 323 89 18 0 chr15 49189691 49189747 -54305227 + (TA)n Simple_repeat Simple_repeat 1 57 0 2 960 21 0 0 0 chr15 49189833 49189854 -54305120 + AT_rich Low_complexity Low_complexity 1 21 0 2 960 880 87 16 8 chr15 49190318 49190446 -54304528 + B1_Mus1 SINE Alu 20 148 0 2 960 341 22 22 0 chr15 49190951 49190997 -54303977 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 960 2537 198 61 35 chr15 49191431 49191476 -54303498 - RMER6D LTR ERVK -4 716 680 2 960 1053 88 0 13 chr15 49191476 49191626 -54303348 + B1_Mus1 SINE Alu 1 148 0 2 960 2537 196 122 21 chr15 49191626 49192228 -54302746 - RMER6D LTR ERVK -41 679 1 2 960 37480 17 1 8 chr15 49192996 49198199 -54296775 + L1Md_A LINE L1 422 5586 -297 2 960 8571 24 0 0 chr15 49198199 49199195 -54295779 + L1Md_A LINE L1 5587 6582 0 2 960 258 58 57 19 chr15 49199809 49199862 -54295112 + (TTTG)n Simple_repeat Simple_repeat 3 57 0 2 960 6591 125 38 8 chr15 49199873 49201633 -54293341 - L1_Mus4 LINE L1 -10 6626 4807 2 960 216 310 0 0 chr15 49202087 49202174 -54292800 + T-rich Low_complexity Low_complexity 1 87 0 2 960 338 367 135 26 chr15 49202203 49202396 -54292578 - ID_B1 SINE B4 0 224 11 2 960 338 0 0 23 chr15 49202450 49202493 -54292481 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 2 960 351 160 0 0 chr15 49203667 49203742 -54291232 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 960 41119 10 0 2 chr15 49203837 49211245 -54283729 - L1Md_A LINE L1 0 6582 1 2 960 1807 320 73 15 chr15 49211440 49212319 -54282655 - RCHARR1 DNA MER1_type -42 932 3 2 960 1405 255 41 21 chr15 49212544 49212795 -54282179 - Lx6 LINE L1 -176 7284 7032 2 960 1566 25 0 29 chr15 49212795 49213000 -54281974 - L1Md_F3 LINE L1 -1 6583 6385 2 960 1405 255 41 21 chr15 49213000 49213136 -54281838 - Lx6 LINE L1 -429 7031 6890 2 960 186 43 0 0 chr15 49213139 49213162 -54281812 + (TTC)n Simple_repeat Simple_repeat 3 25 0 2 960 579 53 0 0 chr15 49213160 49213235 -54281739 + (TC)n Simple_repeat Simple_repeat 1 75 0 2 960 346 164 0 15 chr15 49213235 49213303 -54281671 - Lx7 LINE L1 -791 6905 6839 2 960 27 0 0 0 chr15 49213379 49213406 -54281568 + AT_rich Low_complexity Low_complexity 1 27 0 2 960 21 0 0 0 chr15 49214154 49214175 -54280799 + AT_rich Low_complexity Low_complexity 1 21 0 2 960 223 343 29 29 chr15 49214547 49214652 -54280322 + B1F2 SINE Alu 12 116 -33 2 960 433 371 49 12 chr15 49215312 49215550 -54279424 + MLT1G3 LTR MaLR 333 580 -15 2 960 23 0 0 0 chr15 49215604 49215627 -54279347 + AT_rich Low_complexity Low_complexity 1 23 0 2 960 561 175 0 0 chr15 49216486 49216589 -54278385 - RLTR11A2 LTR ERVK 0 527 425 2 960 1179 214 80 4 chr15 49216582 49216844 -54278130 - RLTR11A2 LTR ERVK -245 282 1 2 960 234 216 0 0 chr15 49217401 49217475 -54277499 + A-rich Low_complexity Low_complexity 1 74 0 2 960 252 143 0 0 chr15 49217562 49217604 -54277370 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 960 1152 22 0 0 chr15 49217604 49217739 -54277235 + (GGGAGA)n Simple_repeat Simple_repeat 5 139 0 2 960 1916 177 37 67 chr15 49217745 49218151 -54276823 + ORR1B1 LTR MaLR 1 394 0 2 960 515 368 105 4 chr15 49218346 49218594 -54276380 - B4A SINE B4 0 292 20 2 960 285 231 98 49 chr15 49218699 49218822 -54276152 - Lx8 LINE L1 -101 7372 7244 2 960 702 332 20 16 chr15 49218847 49219092 -54275882 + Lx8 LINE L1 6928 7173 -300 2 960 27 49 0 0 chr15 49219460 49219501 -54275473 + AT_rich Low_complexity Low_complexity 1 41 0 2 960 918 345 63 39 chr15 49219514 49220133 -54274841 - Lx8 LINE L1 -34 7439 6806 2 960 452 294 17 0 chr15 49222605 49222724 -54272250 - RSINE1 SINE B4 -36 129 9 2 960 855 285 123 6 chr15 49222754 49223086 -54271888 - ORR1D1 LTR MaLR 0 374 4 2 960 1047 102 0 7 chr15 49223201 49223349 -54271625 - B1_Mus2 SINE Alu 0 147 1 2 960 9010 150 46 43 chr15 49223351 49223669 -54271305 + Lx4A LINE L1 2889 3189 -2688 2 960 1126 95 0 0 chr15 49223669 49223816 -54271158 + B1_Mus1 SINE Alu 1 147 -1 2 960 9010 150 46 43 chr15 49223816 49223964 -54271010 + Lx4A LINE L1 3190 3333 -2544 2 960 198 0 0 0 chr15 49223964 49223986 -54270988 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 960 9010 169 57 29 chr15 49223986 49227347 -54267627 + Lx4A LINE L1 3334 7004 -54 2 960 234 210 14 101 chr15 49228352 49228421 -54266553 - RLTR22_Mur LTR ERVK -479 1369 1307 2 960 231 246 15 0 chr15 49228695 49228760 -54266214 + (TTA)n Simple_repeat Simple_repeat 3 68 0 2 960 26 0 0 0 chr15 49228839 49228865 -54266109 + AT_rich Low_complexity Low_complexity 1 26 0 2 960 21 36 0 0 chr15 49228961 49228989 -54265985 + AT_rich Low_complexity Low_complexity 1 28 0 2 960 21 0 0 0 chr15 49229747 49229768 -54265206 + AT_rich Low_complexity Low_complexity 1 21 0 2 960 22 0 0 0 chr15 49229914 49229936 -54265038 + AT_rich Low_complexity Low_complexity 1 22 0 2 960 6688 35 1 0 chr15 49231746 49232536 -54262438 + L1Md_F2 LINE L1 5789 6579 -3 2 960 671 190 81 0 chr15 49233140 49233314 -54261660 - Lx9 LINE L1 -97 7547 7360 2 960 252 260 58 68 chr15 49233866 49233878 -54261096 + ORR1B1 LTR MaLR 229 238 -129 2 960 767 31 0 10 chr15 49233878 49233977 -54260997 + (TAGA)n Simple_repeat Simple_repeat 4 101 0 2 960 316 260 58 68 chr15 49233977 49234067 -54260907 + ORR1B1 LTR MaLR 239 358 -36 2 960 9255 97 19 12 chr15 49234118 49235993 -54258981 + L1VL4 LINE L1 398 2289 -1270 2 960 6501 153 19 3 chr15 49235993 49237113 -54257861 + Lx2 LINE L1 5860 6997 0 2 960 202 216 0 0 chr15 49238907 49238958 -54256016 + T-rich Low_complexity Low_complexity 1 51 0 2 960 23 33 0 0 chr15 49238959 49238989 -54255985 + AT_rich Low_complexity Low_complexity 1 30 0 2 960 468 278 149 6 chr15 49239387 49239561 -54255413 + MTE2b LTR MaLR 1 199 -180 2 960 291 186 14 28 chr15 49239601 49239673 -54255301 + B1_Mur4 SINE Alu 80 150 0 2 960 329 405 0 0 chr15 49239772 49239898 -54255076 - B1F SINE Alu 0 149 24 2 960 493 333 0 0 chr15 49239899 49240040 -54254934 + MTE2b LTR MaLR 225 365 -14 2 960 906 103 0 121 chr15 49240236 49240402 -54254572 + B1_Mus1 SINE Alu 2 147 -1 2 960 218 214 84 14 chr15 49240637 49240708 -54254266 - BC1_Mm scRNA scRNA -44 108 33 2 960 3113 118 102 36 chr15 49242017 49242600 -54252374 + Lx3C LINE L1 5558 6154 -822 2 960 1808 171 92 6 chr15 49242600 49242936 -54252038 + RLTR26 LTR ERVK 1 365 -277 2 960 4718 128 80 9 chr15 49242970 49243742 -54251232 + Lx3C LINE L1 6148 6974 -2 2 960 21 0 0 0 chr15 49243920 49243941 -54251033 + AT_rich Low_complexity Low_complexity 1 21 0 3 960 226 224 17 0 chr15 49244029 49244087 -54250887 + (AACTG)n Simple_repeat Simple_repeat 4 62 0 3 960 1769 178 32 12 chr15 49244089 49244468 -54250506 - RMER6C LTR ERVK -325 395 1 3 960 27 81 0 0 chr15 49245884 49245946 -54249028 + AT_rich Low_complexity Low_complexity 1 62 0 3 960 32294 91 9 6 chr15 49245951 49251117 -54243857 + L1Md_F2 LINE L1 401 5585 -298 3 960 7825 53 2 1 chr15 49251118 49252098 -54242876 + L1Md_F2 LINE L1 5587 6567 -15 3 960 279 0 0 0 chr15 49252098 49252129 -54242845 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 960 491 320 67 55 chr15 49252141 49252636 -54242338 - Lx9 LINE L1 -41 7603 7103 3 960 693 167 0 0 chr15 49252640 49252766 -54242208 + (CATATA)n Simple_repeat Simple_repeat 4 129 0 3 960 1509 216 108 11 chr15 49252824 49253176 -54241798 - ORR1B1 LTR MaLR 0 394 9 3 960 1356 58 0 0 chr15 49253225 49253432 -54241542 + (TTTC)n Simple_repeat Simple_repeat 1 207 0 3 960 2330 56 9 45 chr15 49253492 49253827 -54241147 + IAPEY2_LTR LTR ERVK 35 357 0 3 960 882 339 62 24 chr15 49253827 49254278 -54240696 - Lx9 LINE L1 -708 6936 6469 3 960 710 109 8 0 chr15 49254320 49254439 -54240535 + (TA)n Simple_repeat Simple_repeat 1 120 0 3 960 864 246 54 22 chr15 49254508 49254901 -54240073 - Lx9 LINE L1 -1540 6104 5669 3 960 585 234 0 0 chr15 49255972 49256130 -54238844 + (TA)n Simple_repeat Simple_repeat 1 158 0 3 960 255 214 0 0 chr15 49256151 49256221 -54238753 + (TA)n Simple_repeat Simple_repeat 2 71 0 3 960 253 376 47 0 chr15 49257117 49257202 -54237772 - PB1D10 SINE Alu -7 110 22 3 960 463 307 84 50 chr15 49257273 49257411 -54237563 - L1MD LINE L1 -837 5309 5172 3 960 3122 110 2 58 chr15 49257411 49257914 -54237060 + MT2C_Mm LTR ERVL 1 475 0 3 960 463 307 84 50 chr15 49257914 49258296 -54236678 - L1MD LINE L1 -975 5171 4771 3 960 28 48 0 0 chr15 49258976 49259018 -54235956 + AT_rich Low_complexity Low_complexity 1 42 0 3 960 438 167 18 9 chr15 49260157 49260266 -54234708 + (TA)n Simple_repeat Simple_repeat 2 111 0 3 960 700 285 22 39 chr15 49260434 49260613 -54234361 + B3A SINE B2 1 176 -22 3 960 231 114 0 0 chr15 49260623 49260658 -54234316 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 960 5452 11 0 0 chr15 49260705 49261328 -54233646 + L1Md_T LINE L1 4964 5586 -297 3 960 8350 38 0 0 chr15 49261328 49262324 -54232650 + L1Md_T LINE L1 5587 6582 0 3 960 426 115 9 37 chr15 49262377 49262485 -54232489 + T-rich Low_complexity Low_complexity 2 106 0 3 960 993 116 0 13 chr15 49262488 49262637 -54232337 - B1_Mus1 SINE Alu 0 148 2 3 960 4828 179 196 18 chr15 49262917 49264164 -54230810 - L1_Mur2 LINE L1 -582 5295 3826 3 960 493 47 0 45 chr15 49264164 49264231 -54230743 - RLTR10-int LTR ERVK -1620 367 304 3 960 2368 88 164 0 chr15 49264233 49264316 -54230658 - RLTR10A LTR ERVK 0 411 280 3 960 750 75 0 0 chr15 49264316 49264422 -54230552 + (TC)n Simple_repeat Simple_repeat 1 106 0 3 960 2368 88 164 0 chr15 49264422 49264691 -54230283 - RLTR10A LTR ERVK -132 279 2 3 960 2687 197 49 19 chr15 49264694 49264843 -54230131 - Lx2B LINE L1 -73 6927 6775 3 960 315 0 0 0 chr15 49264843 49264878 -54230096 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 960 2687 197 49 19 chr15 49264878 49265302 -54229672 - Lx2B LINE L1 -226 6774 6339 3 960 742 54 40 27 chr15 49265303 49265444 -54229530 + IAP-d-int LTR ERVK 477 602 -1385 3 960 793 196 0 0 chr15 49265441 49265594 -54229380 + IAP-d-int LTR ERVK 347 499 -6043 3 960 3619 64 82 12 chr15 49265595 49266083 -54228891 + IAP-d-int LTR ERVK 5006 5527 -1015 3 960 1575 83 5 5 chr15 49266087 49266305 -54228669 + IAP-d-int LTR ERVK 5667 5884 -658 3 960 4816 87 28 13 chr15 49266306 49266995 -54227979 + RLTR10-int LTR ERVK 1288 1986 -1 3 960 2574 74 125 5 chr15 49266995 49267264 -54227710 + RLTR10A LTR ERVK 1 278 -133 3 960 501 17 0 0 chr15 49267264 49267322 -54227652 + (GA)n Simple_repeat Simple_repeat 1 58 0 3 960 2574 74 125 5 chr15 49267322 49267419 -54227555 + RLTR10A LTR ERVK 279 410 -1 3 960 25 83 0 0 chr15 49267455 49267515 -54227459 + AT_rich Low_complexity Low_complexity 1 60 0 3 960 1338 198 25 69 chr15 49268545 49268865 -54226109 - ORR1A4 LTR MaLR -23 306 1 3 960 806 156 14 0 chr15 49268865 49269006 -54225968 - ORR1A4-int LTR MaLR 0 1963 1821 3 960 801 40 0 0 chr15 49269012 49269113 -54225861 + B1_Mus2 SINE Alu 47 147 0 3 960 3768 181 62 10 chr15 49269139 49270004 -54224970 - ORR1A4-int LTR MaLR -191 1772 1001 3 960 347 202 0 12 chr15 49270004 49270089 -54224885 + CT-rich Low_complexity Low_complexity 3 86 0 3 960 343 301 0 75 chr15 49270134 49270234 -54224740 - ORR1A4-int LTR MaLR -906 886 795 3 960 189 0 0 0 chr15 49270234 49270255 -54224719 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 3 960 2731 181 24 2 chr15 49270255 49270753 -54224221 - Lx4A LINE L1 -3 7055 6547 3 960 343 301 0 75 chr15 49270753 49270784 -54224190 - ORR1A4-int LTR MaLR -998 794 765 3 960 7225 132 13 5 chr15 49270786 49271953 -54223021 + ORR1A2-int LTR MaLR 788 1963 0 3 960 2107 122 22 3 chr15 49271954 49272275 -54222699 + ORR1A2 LTR MaLR 1 327 0 3 960 5104 209 45 45 chr15 49272275 49274000 -54220974 - L1_Mur2 LINE L1 -3339 2538 816 3 960 1624 170 70 65 chr15 49274038 49274441 -54220533 + RLTR31_Mm LTR ERVK 157 561 0 3 960 1002 236 55 65 chr15 49274443 49274946 -54220028 + RMER3D-int LTR ERVK 3 847 -1995 3 960 399 231 21 43 chr15 49275022 49275162 -54219812 + RMER3D-int LTR ERVK 1015 1151 -1691 3 960 252 0 0 0 chr15 49275178 49275206 -54219768 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 3 960 4518 207 58 74 chr15 49275213 49276594 -54218380 + RMER3D-int LTR ERVK 1463 2822 -20 3 960 294 29 0 0 chr15 49276594 49276629 -54218345 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3 960 4518 207 58 74 chr15 49276629 49276648 -54218326 + RMER3D-int LTR ERVK 2823 2840 -2 3 960 2075 201 52 55 chr15 49276650 49277213 -54217761 + RLTR31_Mm LTR ERVK 1 561 0 3 960 1219 167 4 13 chr15 49277361 49277591 -54217383 + MTB LTR MaLR 1 228 -172 3 960 1121 136 23 6 chr15 49277591 49277768 -54217206 + B2_Mm2 SINE B2 2 181 -14 3 960 374 158 9 0 chr15 49277800 49277864 -54217110 + B2_Mm2 SINE B2 47 114 -102 3 960 1104 153 45 50 chr15 49277886 49277917 -54217057 + MTB LTR MaLR 182 214 -186 3 960 1251 94 0 0 chr15 49277917 49278097 -54216877 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 960 1104 153 45 50 chr15 49278097 49278285 -54216689 + MTB LTR MaLR 215 400 0 3 960 1232 299 51 18 chr15 49279184 49279952 -54215022 + Lx6 LINE L1 6556 7413 -47 3 960 192 263 0 0 chr15 49279965 49280041 -54214933 + GA-rich Low_complexity Low_complexity 2 77 0 3 960 1562 0 0 6 chr15 49280041 49280220 -54214754 + (GAA)n Simple_repeat Simple_repeat 3 180 0 3 960 25 65 0 0 chr15 49280518 49280564 -54214410 + AT_rich Low_complexity Low_complexity 1 46 0 3 960 1474 156 11 7 chr15 49280622 49280894 -54214080 + L1_Mus2 LINE L1 3771 4043 -1840 3 960 7170 98 5 25 chr15 49280920 49282460 -54212514 + L1_Mus2 LINE L1 5070 6565 -1 3 961 395 268 100 70 chr15 49283731 49283972 -54211002 + L1MC3 LINE L1 6587 6834 -951 3 961 21 0 0 0 chr15 49284203 49284224 -54210750 + AT_rich Low_complexity Low_complexity 1 21 0 3 961 40 21 0 0 chr15 49284316 49284363 -54210611 + AT_rich Low_complexity Low_complexity 1 47 0 3 961 22 0 0 0 chr15 49284418 49284440 -54210534 + AT_rich Low_complexity Low_complexity 1 22 0 3 961 484 73 0 24 chr15 49284622 49284706 -54210268 + (TA)n Simple_repeat Simple_repeat 1 82 0 3 961 448 260 131 16 chr15 49285247 49285463 -54209511 + L1M5 LINE L1 5520 5766 -418 3 961 2642 198 40 42 chr15 49286211 49286913 -54208061 + RMER17B LTR ERVK 1 952 -6 3 961 452 174 13 46 chr15 49287317 49287441 -54207533 - L1_Mur2 LINE L1 -6332 380 285 3 961 4523 120 11 8 chr15 49287542 49288509 -54206465 + L1_Mur2 LINE L1 959 1933 -3944 3 961 843 213 145 53 chr15 49288513 49289059 -54205915 - RMER6C LTR ERVK -59 697 1 3 961 1880 29 29 4 chr15 49289635 49289879 -54205095 + L1Md_F2 LINE L1 6332 6581 -1 3 961 588 40 0 0 chr15 49290221 49290296 -54204678 + (TTTC)n Simple_repeat Simple_repeat 3 77 0 3 961 27 0 0 0 chr15 49292022 49292049 -54202925 + AT_rich Low_complexity Low_complexity 1 27 0 3 961 29 112 0 0 chr15 49293639 49293773 -54201201 + AT_rich Low_complexity Low_complexity 1 134 0 3 961 21 36 0 0 chr15 49294013 49294041 -54200933 + AT_rich Low_complexity Low_complexity 1 28 0 3 961 221 75 25 0 chr15 49294048 49294088 -54200886 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 3 961 226 351 116 24 chr15 49294204 49294411 -54200563 + Lx8 LINE L1 7233 7458 -15 3 961 1147 177 152 15 chr15 49294762 49295026 -54199948 + RMER6C LTR ERVK 1 300 -390 3 961 373 343 103 17 chr15 49295007 49295182 -54199792 - MLT1D LTR MaLR -315 190 1 3 961 26 0 0 0 chr15 49295432 49295458 -54199516 + AT_rich Low_complexity Low_complexity 1 26 0 3 961 459 100 0 0 chr15 49295482 49295552 -54199422 + 4.5SRNA scRNA scRNA 1 70 -24 3 961 265 260 38 48 chr15 49295552 49295587 -54199387 + PB1 SINE Alu 2 105 -22 3 961 21 82 0 0 chr15 49295992 49296041 -54198933 + AT_rich Low_complexity Low_complexity 1 49 0 3 961 513 314 105 32 chr15 49296994 49297241 -54197733 - MamRep605 Unknown Unknown -144 732 468 3 961 2081 237 18 34 chr15 49297372 49297878 -54197096 + RLTR16 LTR ERVK 8 505 0 3 961 27 0 0 0 chr15 49297939 49297966 -54197008 + AT_rich Low_complexity Low_complexity 1 27 0 3 961 7959 144 25 24 chr15 49297975 49299566 -54195408 - Lx3B LINE L1 -3 6970 5374 3 961 422 264 75 30 chr15 49299820 49299953 -54195021 + MTD LTR MaLR 6 144 -275 3 961 30413 113 14 6 chr15 49299953 49305644 -54189330 + L1Md_F2 LINE L1 1 5585 -298 3 961 7163 89 6 16 chr15 49305645 49306649 -54188325 + L1Md_F2 LINE L1 5587 6580 -2 3 961 760 355 39 0 chr15 49306649 49306905 -54188069 + MTD LTR MaLR 124 389 -30 3 961 25 31 0 0 chr15 49307039 49307071 -54187903 + AT_rich Low_complexity Low_complexity 1 32 0 3 961 558 183 0 0 chr15 49307492 49307607 -54187367 + (TG)n Simple_repeat Simple_repeat 2 116 0 3 961 1181 221 38 76 chr15 49307927 49308269 -54186705 + ORR1A4 LTR MaLR 1 329 0 3 961 3650 183 34 56 chr15 49308269 49309087 -54185887 + ORR1A4-int LTR MaLR 1 800 -1163 3 961 1032 201 77 0 chr15 49308907 49309024 -54185950 + MT2B LTR ERVL 35 167 -434 3 961 229 364 83 25 chr15 49309024 49309145 -54185829 + B1_Mus2 SINE Alu 3 130 -17 3 961 923 254 7 34 chr15 49309137 49309431 -54185543 + ORR1A4-int LTR MaLR 719 1004 -959 3 961 2385 83 0 59 chr15 49309498 49309870 -54185104 + L1_Mus2 LINE L1 6216 6565 -1 3 961 21 0 0 0 chr15 49309880 49309901 -54185073 + AT_rich Low_complexity Low_complexity 1 21 0 3 961 3377 273 41 11 chr15 49309901 49310786 -54184188 - Lx7 LINE L1 -503 7193 6283 3 961 1921 200 38 14 chr15 49310823 49311269 -54183705 - L1_Mur3 LINE L1 -559 5321 4865 3 961 1217 204 25 4 chr15 49311272 49311513 -54183461 - RMER6D LTR ERVK -1 719 474 3 961 780 228 63 128 chr15 49311533 49311900 -54183074 - RMER2 LTR ERV1 -35 532 190 3 961 238 191 43 0 chr15 49311904 49311951 -54183023 - RMER2 LTR ERV1 -517 50 2 3 961 2022 206 35 67 chr15 49311952 49312445 -54182529 - RMER6D LTR ERVK -243 477 1 3 961 1205 257 80 8 chr15 49312455 49312831 -54182143 - L1_Mur3 LINE L1 -1019 4861 4459 3 961 985 187 26 75 chr15 49313061 49313287 -54181687 + RLTR16 LTR ERVK 1 215 -290 3 961 961 229 72 14 chr15 49313274 49313495 -54181479 - RLTR16 LTR ERVK -32 473 240 3 961 310 270 43 43 chr15 49313518 49313611 -54181363 - MLT2C1 LTR ERVL -304 93 1 3 961 576 254 22 0 chr15 49313836 49313974 -54181000 - RLTR40 LTR ERVK -15 802 662 3 961 343 341 86 26 chr15 49313983 49314215 -54180759 - MLT2C1 LTR ERVL -151 246 1 3 961 227 237 17 0 chr15 49314553 49314612 -54180362 + (TA)n Simple_repeat Simple_repeat 1 60 0 3 961 300 53 0 0 chr15 49315111 49315149 -54179825 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 961 992 131 0 0 chr15 49315186 49315331 -54179643 - B1_Mus2 SINE Alu -2 145 1 3 961 741 245 56 123 chr15 49315363 49315831 -54179143 + RMER2 LTR ERV1 3 540 -27 3 961 28 0 0 0 chr15 49315856 49315884 -54179090 + AT_rich Low_complexity Low_complexity 1 28 0 4 961 204 158 0 0 chr15 49315884 49315922 -54179052 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 4 961 22 0 0 0 chr15 49316094 49316116 -54178858 + AT_rich Low_complexity Low_complexity 1 22 0 4 961 380 299 75 20 chr15 49316281 49316482 -54178492 + Tigger15a DNA TcMar 340 551 -164 4 961 369 335 36 31 chr15 49318490 49318684 -54176290 + MLT1B LTR MaLR 3 197 -193 4 961 354 352 141 49 chr15 49319116 49319374 -54175600 + B4A SINE B4 6 287 -5 4 961 189 74 0 0 chr15 49319374 49319401 -54175573 + (CAA)n Simple_repeat Simple_repeat 3 29 0 4 961 303 273 13 13 chr15 49319562 49319632 -54175342 + RSINE1 SINE B4 12 81 -84 4 961 1146 193 77 27 chr15 49319632 49319893 -54175081 - RMER6C LTR ERVK 0 690 417 4 961 392 257 18 35 chr15 49320087 49320200 -54174774 - Lx2B LINE L1 -13 6987 6877 4 961 1547 201 33 78 chr15 49320245 49320640 -54174334 - ORR1C1 LTR MaLR 0 378 2 4 961 22 35 0 0 chr15 49321165 49321194 -54173780 + AT_rich Low_complexity Low_complexity 1 29 0 4 961 189 132 0 0 chr15 49321671 49321709 -54173265 + (TTG)n Simple_repeat Simple_repeat 2 39 0 4 961 531 0 0 0 chr15 49321724 49321783 -54173191 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 961 279 0 0 0 chr15 49321783 49321813 -54173161 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 961 917 205 101 13 chr15 49324412 49324639 -54170335 - Lx2A1 LINE L1 -3 7005 6759 4 961 537 359 74 27 chr15 49324753 49325011 -54169963 - B4A SINE B4 -9 283 14 4 961 236 211 35 0 chr15 49325164 49325221 -54169753 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 961 226 411 9 0 chr15 49325355 49325462 -54169512 + PB1D10 SINE Alu 10 117 0 4 961 3922 103 3 5 chr15 49325541 49326108 -54168866 + L1_Mus3 LINE L1 6073 6638 0 4 961 278 385 60 9 chr15 49327361 49327594 -54167380 - MER31A LTR ERV1 -3 482 238 4 961 296 295 34 43 chr15 49327653 49327770 -54167204 - MER31A LTR ERV1 -359 126 11 4 961 389 340 117 46 chr15 49328523 49329018 -54165956 + L1M4 LINE L1 2382 2911 -3235 4 961 1589 237 21 180 chr15 49329018 49329744 -54165230 + RMER19C LTR ERVK 2 611 0 4 961 389 340 117 46 chr15 49329744 49329830 -54165144 + L1M4 LINE L1 2912 3003 -3143 4 961 369 0 0 0 chr15 49329832 49329873 -54165101 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 961 481 246 215 6 chr15 49330293 49330465 -54164509 - B3 SINE B2 -7 209 2 4 961 328 320 90 39 chr15 49330487 49330799 -54164175 + L1M4 LINE L1 4877 5204 -942 4 961 193 367 27 21 chr15 49331567 49331674 -54163300 - MIRc SINE MIR -122 146 33 4 961 2965 108 19 25 chr15 49331702 49331976 -54162998 + L1_Mus3 LINE L1 6168 6441 -197 4 961 5922 165 38 32 chr15 49331976 49333083 -54161891 + RLTR13D3 LTR ERVK 1 1114 0 4 961 1093 125 46 25 chr15 49333084 49333281 -54161693 + L1_Mus3 LINE L1 6437 6637 -1 4 961 322 360 19 32 chr15 49333442 49333597 -54161377 + L2 LINE L2 2410 2562 -857 4 961 213 82 61 0 chr15 49334090 49334139 -54160835 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 4 961 4876 97 7 11 chr15 49334763 49335483 -54159491 - L1_Mus3 LINE L1 -2 6636 5920 4 961 26 50 0 0 chr15 49335492 49335532 -54159442 + AT_rich Low_complexity Low_complexity 1 40 0 4 961 2822 173 32 39 chr15 49337390 49337832 -54157142 + RLTR20C LTR ERVK 3 432 -102 4 961 504 0 0 0 chr15 49337832 49337888 -54157086 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 961 2822 173 32 39 chr15 49337888 49337981 -54156993 + RLTR20C LTR ERVK 433 533 -1 4 961 1242 224 6 76 chr15 49338261 49338509 -54156465 + RMER1B Other Other 735 959 -107 4 961 507 95 0 0 chr15 49338509 49338583 -54156391 + (TG)n Simple_repeat Simple_repeat 1 74 0 4 961 1242 224 6 76 chr15 49338583 49338691 -54156283 + RMER1B Other Other 960 1066 0 4 961 269 241 0 0 chr15 49339887 49339945 -54155029 - Lx9 LINE L1 -168 7476 7419 4 961 3034 257 119 17 chr15 49339947 49340905 -54154069 - Lx9 LINE L1 -193 7451 6396 4 961 260 146 174 33 chr15 49340892 49340984 -54153990 - Lx9 LINE L1 -7 7637 7533 4 961 558 234 15 0 chr15 49341018 49341155 -54153819 - Lx9 LINE L1 -184 7460 7322 4 961 21 0 0 0 chr15 49341399 49341420 -54153554 + AT_rich Low_complexity Low_complexity 1 21 0 4 961 38 51 0 0 chr15 49341466 49341525 -54153449 + AT_rich Low_complexity Low_complexity 1 59 0 4 961 967 214 8 68 chr15 49342506 49342594 -54152380 - URR1A DNA MER1_type 0 226 147 4 961 555 82 27 18 chr15 49342594 49342706 -54152268 - L1Md_F3 LINE L1 -1 6583 6471 4 961 967 214 8 68 chr15 49342706 49342853 -54152121 - URR1A DNA MER1_type -80 146 5 4 961 1371 232 15 86 chr15 49343070 49343475 -54151499 + ORR1C1 LTR MaLR 1 376 -2 4 961 2210 222 31 27 chr15 49343482 49343995 -54150979 + ORR1C1-int LTR MaLR 6 520 -989 4 961 8462 29 1 0 chr15 49344022 49345220 -54149754 - L1Md_T LINE L1 -2 6580 5382 4 961 2894 249 55 36 chr15 49345221 49346092 -54148882 + ORR1C1-int LTR MaLR 511 1398 -111 4 961 1186 256 30 75 chr15 49346164 49346578 -54148396 + ORR1C1 LTR MaLR 11 394 0 4 961 553 271 205 6 chr15 49346610 49346781 -54148193 - B3 SINE B2 -10 206 2 4 961 21 36 0 0 chr15 49347405 49347433 -54147541 + AT_rich Low_complexity Low_complexity 1 28 0 4 961 4201 215 31 6 chr15 49347522 49348629 -54146345 + Lx4B LINE L1 5845 6997 -3 4 961 234 369 41 0 chr15 49349148 49349270 -54145704 + L1VL4 LINE L1 521 647 -5655 4 961 270 53 17 51 chr15 49349273 49349332 -54145642 + (CAAAA)n Simple_repeat Simple_repeat 2 58 0 4 961 1219 216 42 2 chr15 49349332 49349807 -54145167 + L1_Mur2 LINE L1 1005 1498 -4379 4 961 1067 76 89 6 chr15 49349801 49349959 -54145015 + L1_Mus1 LINE L1 6325 6495 -72 4 961 2892 149 141 2 chr15 49349951 49350496 -54144478 + Lx5 LINE L1 5166 5786 -91 4 961 11091 27 47 45 chr15 49350494 49351252 -54143722 + L1_Mm LINE L1 4105 4898 -985 4 961 227 183 46 77 chr15 49351252 49351317 -54143657 - RMER20A LTR ERVK -268 248 186 4 961 11091 27 47 45 chr15 49351317 49351972 -54143002 + L1_Mm LINE L1 4899 5586 -297 4 961 8337 31 7 0 chr15 49351972 49352961 -54142013 + L1Md_T LINE L1 5587 6582 0 4 961 4325 248 47 56 chr15 49352970 49354036 -54140938 + Lx5 LINE L1 5802 6897 -153 4 961 276 77 0 0 chr15 49354036 49354075 -54140899 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 961 4325 248 47 56 chr15 49354075 49354264 -54140710 + Lx5 LINE L1 6898 7046 -4 4 961 2480 215 39 71 chr15 49354508 49355596 -54139378 + RMER16-int LTR ERVK 184 1196 -4612 4 961 974 58 28 39 chr15 49355596 49355774 -54139200 + (GGAAA)n Simple_repeat Simple_repeat 1 176 0 4 961 2223 249 48 99 chr15 49355774 49355802 -54139172 + RMER16-int LTR ERVK 1197 1224 -4584 4 961 612 40 0 0 chr15 49355802 49355877 -54139097 + (GGAGA)n Simple_repeat Simple_repeat 1 75 0 4 961 285 202 6 52 chr15 49355882 49355991 -54138983 + RMER16-int LTR ERVK 1326 1394 -6012 4 961 419 142 0 1 chr15 49355993 49356072 -54138902 + RMER16-int LTR ERVK 2926 2996 -4410 4 961 5518 119 46 61 chr15 49356075 49356369 -54138605 + RMER16-int LTR ERVK 3307 3589 -1817 4 961 1072 93 0 0 chr15 49356369 49356509 -54138465 + B1_Mus2 SINE Alu 2 141 -6 4 961 252 0 0 0 chr15 49356511 49356539 -54138435 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 4 961 5518 119 46 61 chr15 49356539 49356878 -54138096 + RMER16-int LTR ERVK 3590 3927 -1479 4 961 3412 18 10 0 chr15 49356878 49357270 -54137704 + MTA_Mm LTR MaLR 1 396 0 4 961 5518 119 46 61 chr15 49357270 49357631 -54137343 + RMER16-int LTR ERVK 3928 4290 -1116 4 961 1903 228 11 23 chr15 49357602 49358038 -54136936 + RMER16-int LTR ERVK 5350 5780 -28 4 961 6906 123 47 2 chr15 49358047 49359113 -54135861 + RLTR13D3 LTR ERVK 1 1114 0 4 961 202 356 127 27 chr15 49359304 49359454 -54135520 + MER5A DNA MER1_type 24 188 -1 4 961 440 264 16 31 chr15 49359526 49359655 -54135319 - B1F2 SINE Alu -1 148 22 4 961 292 301 35 141 chr15 49359944 49360114 -54134860 - MLT1C LTR MaLR -2 465 314 4 961 28 29 0 0 chr15 49360496 49360531 -54134443 + AT_rich Low_complexity Low_complexity 1 35 0 4 961 444 82 0 0 chr15 49360563 49360624 -54134350 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 961 712 323 93 19 chr15 49361115 49361576 -54133398 - Lx8 LINE L1 -223 7250 6756 4 961 1048 109 0 0 chr15 49362519 49362666 -54132308 - B1_Mus1 SINE Alu 0 148 2 4 961 241 358 7 21 chr15 49362677 49362817 -54132157 + CT-rich Low_complexity Low_complexity 3 140 0 4 961 236 93 0 44 chr15 49362817 49362862 -54132112 + (TTCC)n Simple_repeat Simple_repeat 3 45 0 4 961 197 281 62 15 chr15 49362924 49362989 -54131985 + L2a LINE L2 3347 3414 -12 4 961 24 0 0 0 chr15 49363279 49363303 -54131671 + AT_rich Low_complexity Low_complexity 1 24 0 4 961 977 303 26 14 chr15 49364196 49364541 -54130433 - Charlie25 DNA MER1_type -1404 1120 772 4 961 615 306 45 0 chr15 49364863 49365062 -54129912 - B3 SINE B2 -7 209 2 4 961 2653 144 117 41 chr15 49365123 49365688 -54129286 - L1_Mus4 LINE L1 -9 6627 6020 4 961 386 284 35 0 chr15 49365760 49365901 -54129073 - L1MA4 LINE L1 -461 5839 5694 4 961 688 237 179 0 chr15 49366080 49366270 -54128704 - Lx2B LINE L1 -1 6999 6776 4 961 744 120 0 33 chr15 49366271 49366392 -54128582 - Lx2 LINE L1 -353 6644 6528 4 961 4706 179 63 78 chr15 49366640 49367758 -54127216 + RLTR25A LTR ERVK 1 1102 -1 4 961 253 307 0 16 chr15 49367771 49367900 -54127074 - L1MA4 LINE L1 -903 5240 5114 4 961 218 284 149 0 chr15 49368205 49368272 -54126702 + B1F1 SINE Alu 17 93 -56 4 961 22 35 0 0 chr15 49368660 49368689 -54126285 + AT_rich Low_complexity Low_complexity 1 29 0 4 961 616 165 10 0 chr15 49369741 49369844 -54125130 + U6 snRNA snRNA 2 105 -2 4 961 180 27 81 0 chr15 49369845 49369882 -54125092 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 4 961 391 292 84 52 chr15 49369989 49370245 -54124729 - RLTR16 LTR ERVK -245 323 24 4 961 334 261 64 2 chr15 49370581 49370711 -54124263 + Lx3A LINE L1 5705 5828 -472 4 961 571 238 32 51 chr15 49370796 49371013 -54123961 + L1_Rod LINE L1 5232 5444 -403 4 961 1119 296 13 40 chr15 49371090 49371470 -54123504 + Lx9 LINE L1 7031 7400 -244 4 961 633 224 12 54 chr15 49371498 49371757 -54123217 - L1_Rod LINE L1 -581 5266 5019 4 961 32 43 0 0 chr15 49371829 49371875 -54123099 + AT_rich Low_complexity Low_complexity 1 46 0 4 961 419 346 88 20 chr15 49371960 49372414 -54122560 - Lx9 LINE L1 -145 7499 7015 4 961 180 0 0 0 chr15 49373000 49373020 -54121954 + (TTATA)n Simple_repeat Simple_repeat 3 22 0 4 961 183 80 0 0 chr15 49373538 49373563 -54121411 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 961 296 329 204 34 chr15 49373577 49373864 -54121110 - Lx9 LINE L1 -206 7438 7103 4 961 22 35 0 0 chr15 49373889 49373918 -54121056 + AT_rich Low_complexity Low_complexity 1 29 0 4 961 21 0 0 0 chr15 49374126 49374147 -54120827 + AT_rich Low_complexity Low_complexity 1 21 0 4 961 22 70 0 0 chr15 49374216 49374259 -54120715 + AT_rich Low_complexity Low_complexity 1 43 0 4 961 437 352 62 29 chr15 49374581 49374999 -54119975 - Lx8 LINE L1 0 7473 7042 4 961 216 274 14 0 chr15 49375986 49376012 -54118962 + (TA)n Simple_repeat Simple_repeat 1 26 0 4 961 186 43 0 0 chr15 49376012 49376035 -54118939 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 961 216 274 14 0 chr15 49376035 49376081 -54118893 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 961 26 64 0 0 chr15 49376158 49376205 -54118769 + AT_rich Low_complexity Low_complexity 1 47 0 5 961 975 282 91 13 chr15 49376255 49376653 -54118321 - L1_Mur3 LINE L1 -690 5190 4762 5 961 284 82 40 27 chr15 49376767 49376842 -54118132 + (TTTTTG)n Simple_repeat Simple_repeat 2 77 0 5 961 28 61 0 0 chr15 49378910 49378959 -54116015 + AT_rich Low_complexity Low_complexity 1 49 0 5 961 2534 26 3 3 chr15 49379209 49379514 -54115460 - L1Md_F3 LINE L1 -2 6582 6278 5 961 689 119 0 29 chr15 49379519 49379623 -54115351 - Lx3A LINE L1 -244 6737 6637 5 961 1054 131 6 0 chr15 49379623 49379783 -54115191 + B2_Mm2 SINE B2 16 176 -19 5 961 776 131 0 44 chr15 49379800 49379936 -54115038 - Lx2 LINE L1 -1205 5792 5663 5 961 382 315 60 24 chr15 49380263 49380436 -54114538 - ORR1D2 LTR MaLR 0 370 169 5 961 2639 88 15 22 chr15 49380482 49380888 -54114086 - BGLII LTR ERVK -18 403 1 5 961 281 294 68 10 chr15 49380889 49380992 -54113982 - ORR1D2 LTR MaLR -265 114 6 5 961 243 0 0 0 chr15 49381403 49381430 -54113544 + (T)n Simple_repeat Simple_repeat 1 27 0 5 961 6327 111 15 12 chr15 49381435 49382406 -54112568 + Lx3_Mus LINE L1 6036 7009 0 5 961 1152 259 105 26 chr15 49382468 49382873 -54112101 - Lx9 LINE L1 -130 7514 7074 5 961 477 0 0 0 chr15 49382873 49382926 -54112048 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 961 1152 259 105 26 chr15 49382926 49382987 -54111987 - Lx9 LINE L1 -571 7073 7012 5 961 1514 325 53 40 chr15 49383259 49383534 -54111440 - Lx5 LINE L1 -19 7031 6747 5 961 1785 95 66 11 chr15 49383534 49383821 -54111153 + L1_Mus4 LINE L1 6334 6636 0 5 961 1514 328 44 34 chr15 49383821 49384193 -54110781 - Lx5 LINE L1 -561 6899 6455 5 961 23 54 0 0 chr15 49384665 49384702 -54110272 + AT_rich Low_complexity Low_complexity 1 37 0 5 961 23 0 0 0 chr15 49384736 49384759 -54110215 + AT_rich Low_complexity Low_complexity 1 23 0 5 961 3284 181 30 7 chr15 49385495 49386102 -54108872 - RLTR17 LTR ERVK -71 621 1 5 961 1157 28 14 0 chr15 49386152 49386293 -54108681 - B1_Mm SINE Alu -3 144 2 5 961 774 344 62 31 chr15 49386489 49386843 -54108131 - MTE2a LTR MaLR -9 370 6 5 961 350 177 49 37 chr15 49387085 49387167 -54107807 + Lx9 LINE L1 7375 7457 -187 5 961 23 68 0 0 chr15 49387357 49387401 -54107573 + AT_rich Low_complexity Low_complexity 1 44 0 5 961 1077 97 0 0 chr15 49387601 49387755 -54107219 - L1_Mus2 LINE L1 -486 6080 5927 5 961 3635 88 6 0 chr15 49387756 49388247 -54106727 + L1_Mus2 LINE L1 6073 6566 0 5 961 300 152 0 0 chr15 49388442 49388496 -54106478 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 961 303 28 0 0 chr15 49388496 49388532 -54106442 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 961 1174 249 81 6 chr15 49389067 49389402 -54105572 - Lx7 LINE L1 -575 7121 6762 5 961 4344 256 43 40 chr15 49389434 49389447 -54105527 - Lx7 LINE L1 -6396 1332 1320 5 961 1396 88 20 0 chr15 49389447 49389651 -54105323 + L1Md_F2 LINE L1 6374 6581 -1 5 961 4344 257 44 43 chr15 49389651 49391082 -54103892 - Lx7 LINE L1 -6409 1319 17 5 961 266 0 29 0 chr15 49391082 49391116 -54103858 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 5 961 1720 265 60 77 chr15 49391116 49391215 -54103759 - Lx7 LINE L1 -7573 155 62 5 961 243 0 0 0 chr15 49391778 49391805 -54103169 + (T)n Simple_repeat Simple_repeat 1 27 0 5 961 203 189 0 19 chr15 49392619 49392673 -54102301 + A-rich Low_complexity Low_complexity 6 58 0 5 961 1915 101 61 58 chr15 49392842 49393168 -54101806 + ORR1A2 LTR MaLR 1 327 0 5 961 28 29 0 0 chr15 49393404 49393439 -54101535 + AT_rich Low_complexity Low_complexity 1 35 0 5 961 1321 153 39 46 chr15 49395182 49395442 -54099532 + Lx3C LINE L1 6717 6974 -2 5 961 26 30 0 0 chr15 49395449 49395482 -54099492 + AT_rich Low_complexity Low_complexity 1 33 0 5 961 21 36 0 0 chr15 49395533 49395561 -54099413 + AT_rich Low_complexity Low_complexity 1 28 0 5 961 536 326 10 58 chr15 49395562 49395770 -54099204 - B3A SINE B2 0 198 1 5 961 1170 301 106 44 chr15 49396150 49396832 -54098142 + RCHARR1 DNA MER1_type 184 907 -67 5 961 522 242 51 25 chr15 49396844 49397001 -54097973 + RCHARR1 DNA MER1_type 813 973 -1 5 961 1774 183 48 17 chr15 49397552 49397907 -54097067 - Lx3C LINE L1 -7 6969 6604 5 961 3666 140 8 28 chr15 49397897 49398399 -54096575 + L1_Mur1 LINE L1 3968 4459 -1427 5 961 1073 72 0 0 chr15 49398399 49398537 -54096437 + B1_Mm SINE Alu 1 138 -9 5 961 915 36 0 0 chr15 49398537 49398648 -54096326 + (GAAA)n Simple_repeat Simple_repeat 2 112 0 5 961 3666 140 8 28 chr15 49398648 49398792 -54096182 + L1_Mur1 LINE L1 4460 4601 -1285 5 961 303 340 39 93 chr15 49398806 49398827 -54096147 - CYRA11_Mm Unknown Y-chromosome -210 407 249 5 961 861 252 31 48 chr15 49398827 49399056 -54095918 + URR1B DNA MER1_type 1 225 0 5 961 185 0 0 39 chr15 49399221 49399247 -54095727 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 5 961 385 333 55 12 chr15 49399723 49399887 -54095087 + MLT2B4 LTR ERVL 13 183 -373 5 961 483 73 0 0 chr15 49400058 49400126 -54094848 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 961 450 132 0 0 chr15 49400136 49400212 -54094762 + (GA)n Simple_repeat Simple_repeat 1 76 0 5 961 7296 91 6 22 chr15 49400244 49401284 -54093690 + RLTR13D5 LTR ERVK 1 1023 0 5 961 575 318 67 55 chr15 49401312 49401714 -54093260 + MER45B DNA Tip100 475 881 -159 5 961 427 261 106 0 chr15 49401729 49401890 -54093084 + MER45B DNA Tip100 733 910 -130 5 961 213 322 53 83 chr15 49402521 49402653 -54092321 - L2 LINE L2 -1103 2316 2189 5 961 2108 111 0 12 chr15 49402679 49403008 -54091966 - BGLII LTR ERVK 0 421 97 5 961 2092 145 6 0 chr15 49403361 49403685 -54091289 - ORR1A2 LTR MaLR -1 326 1 5 961 383 78 16 0 chr15 49403893 49403957 -54091017 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 5 961 5302 45 0 0 chr15 49404439 49405081 -54089893 + L1Md_F2 LINE L1 5820 6461 -121 5 961 24 67 0 0 chr15 49406515 49406560 -54088414 + AT_rich Low_complexity Low_complexity 1 45 0 5 961 735 317 57 42 chr15 49407512 49407845 -54087129 + MTEb LTR MaLR 20 357 -22 5 961 276 209 22 44 chr15 49407954 49408044 -54086930 - RLTR11A LTR ERVK -3 524 437 5 961 7838 51 2 1 chr15 49408073 49409461 -54085513 - L1Md_F2 LINE L1 -1 6581 5190 5 961 1178 241 79 77 chr15 49409462 49409906 -54085068 - RLTR11A LTR ERVK -83 445 1 5 961 1446 232 137 19 chr15 49409919 49410615 -54084359 - RMER6A LTR ERVK -16 740 1 5 961 192 97 0 0 chr15 49411858 49411889 -54083085 + (TGG)n Simple_repeat Simple_repeat 1 31 0 5 961 204 40 0 0 chr15 49411896 49411921 -54083053 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 5 961 397 268 35 18 chr15 49411942 49412056 -54082918 - B1F SINE Alu -21 128 13 5 961 22 35 0 0 chr15 49412727 49412756 -54082218 + AT_rich Low_complexity Low_complexity 1 29 0 5 961 21 57 0 0 chr15 49413439 49413474 -54081500 + AT_rich Low_complexity Low_complexity 1 35 0 5 962 210 143 0 0 chr15 49414557 49414592 -54080382 + (T)n Simple_repeat Simple_repeat 1 35 0 5 962 1126 88 0 0 chr15 49414592 49414739 -54080235 - B1_Mus1 SINE Alu 0 148 2 5 962 308 196 20 30 chr15 49414827 49414836 -54080138 + (TA)n Simple_repeat Simple_repeat 1 9 0 5 962 441 66 0 0 chr15 49414836 49414897 -54080077 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 962 308 196 20 30 chr15 49414897 49414987 -54079987 + (TA)n Simple_repeat Simple_repeat 2 90 0 5 962 310 370 19 0 chr15 49415315 49415423 -54079551 + MTEa LTR MaLR 3 112 -267 5 962 638 309 34 34 chr15 49415997 49416205 -54078769 + ID_B1 SINE B4 4 211 -13 5 962 6662 172 21 6 chr15 49416205 49417817 -54077157 - Lx LINE L1 -365 6289 4588 5 962 1659 194 56 39 chr15 49417813 49418172 -54076802 + Lx LINE L1 6285 6649 -5 5 962 1496 193 23 36 chr15 49418167 49418474 -54076500 + RMER1C Other Other 1040 1342 0 5 962 432 0 0 0 chr15 49418938 49418986 -54075988 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 962 21 57 0 0 chr15 49419012 49419047 -54075927 + AT_rich Low_complexity Low_complexity 1 35 0 5 962 241 283 73 32 chr15 49420013 49420077 -54074897 - MLT1D LTR MaLR -8 497 429 5 962 5523 120 8 13 chr15 49420077 49420955 -54074019 - RLTR13D3 LTR ERVK 0 1114 118 5 962 15908 155 199 16 chr15 49420955 49422819 -54072155 + L1_Mus3 LINE L1 464 2344 -3539 5 962 396 0 0 0 chr15 49422819 49422863 -54072111 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 962 15908 138 272 5 chr15 49422863 49425520 -54069454 + L1_Mus3 LINE L1 2345 6425 -625 5 962 25 31 0 0 chr15 49426060 49426092 -54068882 + AT_rich Low_complexity Low_complexity 1 32 0 5 962 770 48 0 9 chr15 49426097 49426203 -54068771 + B1_Mus2 SINE Alu 42 146 -1 5 962 330 87 0 0 chr15 49426203 49426249 -54068725 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 962 432 0 0 0 chr15 49426250 49426298 -54068676 + (GGAA)n Simple_repeat Simple_repeat 2 49 0 5 962 413 267 179 22 chr15 49426374 49426558 -54068416 + B3 SINE B2 4 216 0 5 962 875 262 75 68 chr15 49426727 49427153 -54067821 - RMER19A LTR ERVK -4 733 285 5 962 2027 233 37 76 chr15 49427153 49427719 -54067255 + RLTR20B3 LTR ERVK 6 549 -28 5 962 918 196 138 29 chr15 49427726 49427969 -54067005 - RMER19A LTR ERVK -356 255 1 5 962 23 0 0 0 chr15 49428348 49428371 -54066603 + AT_rich Low_complexity Low_complexity 1 23 0 5 962 21 36 0 0 chr15 49428732 49428760 -54066214 + AT_rich Low_complexity Low_complexity 1 28 0 5 962 29 28 0 0 chr15 49429415 49429451 -54065523 + AT_rich Low_complexity Low_complexity 1 36 0 5 962 648 0 0 0 chr15 49429493 49429565 -54065409 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 5 962 440 293 57 0 chr15 49429693 49429816 -54065158 - B3A SINE B2 -9 189 60 5 962 210 37 0 0 chr15 49429816 49429843 -54065131 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 5 962 693 276 102 30 chr15 49429880 49430253 -54064721 - L1MC LINE L1 -3248 2898 2499 5 962 395 361 52 17 chr15 49430327 49430499 -54064475 + B3A SINE B2 15 192 -6 5 962 1162 68 0 0 chr15 49430520 49430667 -54064307 - B1_Mus2 SINE Alu 0 147 1 5 962 21 36 0 0 chr15 49431322 49431350 -54063624 + AT_rich Low_complexity Low_complexity 1 28 0 5 962 21329 106 18 19 chr15 49431454 49434208 -54060766 - L1_Mus2 LINE L1 0 6654 3843 5 962 414 0 0 0 chr15 49434208 49434254 -54060720 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 962 21329 120 26 20 chr15 49434254 49434385 -54060589 - L1_Mus2 LINE L1 -2041 3842 3729 5 962 2914 83 18 0 chr15 49434385 49434784 -54060190 - L1_Mus1 LINE L1 0 6567 6162 6 962 21329 120 26 20 chr15 49434784 49436126 -54058848 - L1_Mus2 LINE L1 -2155 3728 2338 5 962 1756 299 14 45 chr15 49436134 49436695 -54058279 + Lx6 LINE L1 6913 7456 -4 6 962 423 287 16 16 chr15 49437310 49437434 -54057540 + RMER15 LTR ERVL 362 485 -90 6 962 335 211 132 22 chr15 49439059 49439195 -54055779 - L1MC3 LINE L1 -102 7683 7533 6 962 698 303 59 62 chr15 49439316 49439719 -54055255 - MT2A LTR ERVL -74 527 1 6 962 1448 292 94 38 chr15 49439794 49440345 -54054629 + Lx8 LINE L1 6534 7115 -358 6 962 234 258 131 20 chr15 49440362 49440461 -54054513 + Lx8 LINE L1 7304 7413 -60 6 962 1036 7 7 28 chr15 49440834 49440979 -54053995 + (TG)n Simple_repeat Simple_repeat 1 142 0 6 962 1215 285 23 23 chr15 49441113 49441458 -54053516 + ORR1D1 LTR MaLR 30 374 0 6 962 3685 272 45 29 chr15 49441458 49442520 -54052454 + ORR1D1-int LTR MaLR 1 1079 -291 6 962 1171 262 98 18 chr15 49442577 49442601 -54052373 + ORR1D1 LTR MaLR 1 24 -350 6 962 480 35 0 0 chr15 49442601 49442659 -54052315 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 962 1171 262 98 18 chr15 49442659 49442972 -54052002 + ORR1D1 LTR MaLR 25 364 -10 6 962 1132 62 7 0 chr15 49442974 49443120 -54051854 + B1_Mus2 SINE Alu 1 147 0 6 962 304 82 33 0 chr15 49443124 49443185 -54051789 + (CAAAAA)n Simple_repeat Simple_repeat 4 66 0 6 962 237 358 49 16 chr15 49443287 49443409 -54051565 + RSINE1 SINE B4 3 128 -37 6 962 207 0 0 0 chr15 49443747 49443770 -54051204 + (TA)n Simple_repeat Simple_repeat 1 23 0 6 962 237 174 0 0 chr15 49444145 49444191 -54050783 - L1MC LINE L1 -616 5717 5672 6 962 243 88 0 0 chr15 49444514 49444548 -54050426 + (TTA)n Simple_repeat Simple_repeat 2 35 0 6 962 21 57 0 0 chr15 49444973 49445008 -54049966 + AT_rich Low_complexity Low_complexity 1 35 0 6 962 201 118 59 0 chr15 49445768 49445819 -54049155 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 962 314 386 16 64 chr15 49446840 49447028 -54047946 + MER20 DNA MER1_type 41 219 0 6 962 21 36 0 0 chr15 49447449 49447477 -54047497 + AT_rich Low_complexity Low_complexity 1 28 0 6 962 510 315 34 0 chr15 49447495 49447644 -54047330 + RSINE1 SINE B4 5 158 -7 6 962 1474 325 64 22 chr15 49448125 49448901 -54046073 + Lx8 LINE L1 6382 7190 -283 6 962 832 124 21 0 chr15 49448936 49449081 -54045893 + (TCTCCC)n Simple_repeat Simple_repeat 3 150 0 6 962 283 325 8 32 chr15 49449083 49449207 -54045767 + Lx8 LINE L1 7232 7352 -121 6 962 701 220 23 127 chr15 49449814 49450074 -54044900 - RLTR23 LTR ERV1 0 430 198 6 962 361 218 11 44 chr15 49450197 49450288 -54044686 - RLTR23 LTR ERV1 -337 93 6 6 962 21 36 0 0 chr15 49451678 49451706 -54043268 + AT_rich Low_complexity Low_complexity 1 28 0 6 962 25 51 0 0 chr15 49452349 49452388 -54042586 + AT_rich Low_complexity Low_complexity 1 39 0 6 962 3460 77 4 0 chr15 49452604 49453072 -54041902 - L1_Mur1 LINE L1 -755 5131 4662 6 962 857 145 0 0 chr15 49453076 49453214 -54041760 + B1_Mus1 SINE Alu 10 147 -1 6 962 1569 15 0 0 chr15 49453231 49453434 -54041540 + (GAA)n Simple_repeat Simple_repeat 1 203 0 6 962 680 136 0 91 chr15 49453434 49453588 -54041386 - L1_Mur1 LINE L1 -1225 4661 4522 6 962 7685 60 4 2 chr15 49453603 49455040 -54039934 - L1Md_F2 LINE L1 -13 6569 5129 6 962 4907 104 35 12 chr15 49455033 49456533 -54038441 - L1Md_F LINE L1 -3969 1914 380 6 962 513 60 0 0 chr15 49456538 49456610 -54038364 - L1_Mur1 LINE L1 -1340 4543 4472 6 962 2236 118 6 3 chr15 49456605 49456928 -54038046 + Lx3_Mus LINE L1 6616 6939 -70 6 962 28 0 0 0 chr15 49456928 49456956 -54038018 + AT_rich Low_complexity Low_complexity 1 28 0 6 962 685 201 7 28 chr15 49457010 49457153 -54037821 + B1_Mur3 SINE Alu 10 149 0 6 962 277 376 25 40 chr15 49457334 49457608 -54037366 - Lx8 LINE L1 -148 7325 7056 6 962 518 140 10 0 chr15 49457712 49457812 -54037162 + (TC)n Simple_repeat Simple_repeat 2 102 0 6 962 412 268 10 0 chr15 49457949 49458046 -54036928 + MTC LTR MaLR 1 98 -323 6 962 2036 146 29 18 chr15 49458080 49458463 -54036511 - BGLII_B LTR ERVK -54 387 1 6 962 1431 181 58 40 chr15 49458463 49458843 -54036131 - MYSERV16_I-int LTR ERVK 0 2326 1940 6 962 788 215 20 10 chr15 49458850 49459047 -54035927 + Lx5 LINE L1 5738 5936 -1114 6 962 3075 158 40 11 chr15 49459570 49460100 -54034874 - Lx4A LINE L1 -189 6869 6325 6 962 335 275 0 32 chr15 49460094 49460188 -54034786 - Lx9 LINE L1 -242 7402 7312 6 962 563 271 0 7 chr15 49460591 49460732 -54034242 + B1_Mur2 SINE Alu 10 149 0 6 962 26 0 0 0 chr15 49460900 49460926 -54034048 + AT_rich Low_complexity Low_complexity 1 26 0 6 962 947 142 7 0 chr15 49460966 49461107 -54033867 + B1_Mus1 SINE Alu 1 142 -6 6 962 862 96 15 0 chr15 49461126 49461261 -54033713 + (GGA)n Simple_repeat Simple_repeat 3 139 0 6 962 1371 62 0 0 chr15 49461262 49461440 -54033534 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 6 962 1583 193 29 24 chr15 49461932 49462272 -54032702 + ORR1A1 LTR MaLR 3 344 -2 6 962 1130 209 24 4 chr15 49462274 49462529 -54032445 + ORR1A1-int LTR MaLR 1 255 -1115 6 962 11787 94 22 9 chr15 49462529 49462695 -54032279 - L1_Mur1 LINE L1 -363 5523 5355 6 962 3036 109 0 45 chr15 49462695 49463165 -54031809 - L1_Mus2 LINE L1 0 6566 6118 6 962 11787 94 22 9 chr15 49463165 49463876 -54031098 - L1_Mur1 LINE L1 -532 5354 4639 6 962 242 0 61 0 chr15 49463876 49463909 -54031065 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 6 962 11787 94 22 9 chr15 49463909 49464808 -54030166 - L1_Mur1 LINE L1 -1248 4638 3723 6 962 2625 127 7 2 chr15 49464810 49465220 -54029754 + Lx3_Mus LINE L1 6551 6962 -47 6 962 249 33 0 0 chr15 49465235 49465265 -54029709 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 6 962 2617 223 119 23 chr15 49465279 49466068 -54028906 + ORR1A1-int LTR MaLR 229 1093 -870 6 962 593 131 63 3 chr15 49466071 49466215 -54028759 + ORR1A1 LTR MaLR 151 374 0 6 962 615 278 70 23 chr15 49466391 49466605 -54028369 - B4A SINE B4 -67 225 2 6 962 23 0 0 0 chr15 49467248 49467271 -54027703 + AT_rich Low_complexity Low_complexity 1 23 0 6 962 936 264 19 0 chr15 49467932 49468201 -54026773 - L1_Mur3 LINE L1 -984 4896 4623 6 962 620 36 12 0 chr15 49468230 49468313 -54026661 + (TG)n Simple_repeat Simple_repeat 1 84 0 6 962 498 46 0 0 chr15 49468313 49468377 -54026597 + (GA)n Simple_repeat Simple_repeat 1 65 0 6 962 1033 257 16 37 chr15 49468667 49468990 -54025984 + Lx6 LINE L1 5714 6029 -1431 6 962 4030 185 80 20 chr15 49468990 49469836 -54025138 + RMER19B LTR ERVK 1 897 -5 6 962 616 316 29 42 chr15 49469841 49470082 -54024892 + Lx6 LINE L1 6024 6261 -1199 6 962 2782 73 39 5 chr15 49470457 49470840 -54024134 - MTA_Mm LTR MaLR 0 396 1 6 962 24 91 0 0 chr15 49471618 49471684 -54023290 + AT_rich Low_complexity Low_complexity 1 66 0 6 962 1556 151 77 0 chr15 49471785 49472070 -54022904 + IAPEY3_LTR LTR ERVK 14 320 -12 6 962 1028 101 43 25 chr15 49472070 49472233 -54022741 + IAPLTR4_I LTR ERVK 11 176 -1294 6 962 1602 132 121 24 chr15 49472232 49472629 -54022345 + IAPEY3-int LTR ERVK 407 952 -6629 6 962 1582 181 96 45 chr15 49472741 49473118 -54021856 + RMER16-int LTR ERVK 251 646 -4760 6 962 250 287 68 11 chr15 49473169 49473257 -54021717 + RMER16-int LTR ERVK 727 819 -4587 6 962 446 241 89 0 chr15 49473262 49473374 -54021600 + RMER16-int LTR ERVK 938 1059 -5078 6 962 298 279 0 55 chr15 49473388 49473479 -54021495 + IAPEY3-int LTR ERVK 2454 2539 -4867 6 962 661 193 0 0 chr15 49473491 49473610 -54021364 + IAPEY3-int LTR ERVK 2635 2753 -4653 6 962 2196 152 58 3 chr15 49473636 49474252 -54020722 + IAPEY3-int LTR ERVK 3567 4271 -3135 6 962 417 198 18 36 chr15 49474257 49474367 -54020607 + MMETn-int LTR ERVK 2357 2464 -2380 6 962 831 81 35 49 chr15 49474393 49474536 -54020438 + IAPEY3-int LTR ERVK 4530 4670 -2911 6 962 3261 98 0 16 chr15 49474791 49475238 -54019736 + IAPEY3-int LTR ERVK 5203 5642 -1939 6 962 3514 84 0 0 chr15 49475229 49475683 -54019291 + IAPEY3-int LTR ERVK 5761 6214 -1367 6 962 4220 92 29 0 chr15 49475673 49476252 -54018722 + IAPEY3-int LTR ERVK 6743 7338 -342 6 962 1391 196 61 20 chr15 49476269 49476612 -54018362 + IAPEz-int LTR ERVK 6125 6481 0 6 962 1575 159 78 0 chr15 49476620 49476916 -54018058 + IAPEY3_LTR LTR ERVK 14 332 0 6 962 1847 223 21 0 chr15 49477078 49477464 -54017510 + ORR1B1 LTR MaLR 1 394 0 6 962 598 134 124 16 chr15 49477518 49477647 -54017327 - Lx7 LINE L1 -818 6878 6736 6 962 324 257 114 9 chr15 49477647 49477761 -54017213 + LTR40a LTR ERVL 12 137 -382 6 962 708 143 34 0 chr15 49478130 49478267 -54016707 - Lx LINE L1 -606 6048 5908 6 962 23 33 0 0 chr15 49478647 49478677 -54016297 + AT_rich Low_complexity Low_complexity 1 30 0 6 962 4069 179 132 8 chr15 49478709 49479604 -54015370 - L1_Mur1 LINE L1 -5975 1007 2 6 962 990 290 120 10 chr15 49480945 49481346 -54013628 + Lx7 LINE L1 6587 7031 -665 6 962 274 299 55 27 chr15 49481360 49481470 -54013504 + Lx7 LINE L1 7089 7201 -495 6 962 1109 233 38 0 chr15 49481470 49481706 -54013268 + RMER19C LTR ERVK 104 348 -263 6 962 237 108 0 0 chr15 49482454 49482491 -54012483 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 962 360 260 0 59 chr15 49482545 49482647 -54012327 - B4A SINE B4 -30 262 167 6 962 297 0 0 0 chr15 49483090 49483123 -54011851 + (A)n Simple_repeat Simple_repeat 1 33 0 6 962 392 309 9 9 chr15 49484861 49484972 -54010002 - ID_B1 SINE B4 -32 192 82 6 962 1411 118 5 0 chr15 49486253 49486456 -54008518 + Lx2 LINE L1 6698 6901 -96 6 962 264 149 0 0 chr15 49486946 49486993 -54007981 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 6 962 1324 327 95 23 chr15 49487260 49487736 -54007238 - L1_Mur3 LINE L1 -12 5868 5352 6 962 450 0 0 0 chr15 49487736 49487786 -54007188 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 962 585 0 0 0 chr15 49487786 49487850 -54007124 + (GA)n Simple_repeat Simple_repeat 1 65 0 6 962 1324 327 95 23 chr15 49487850 49488789 -54006185 - L1_Mur3 LINE L1 -529 5351 4350 6 962 30206 90 22 6 chr15 49488830 49493705 -54001269 + L1Md_F2 LINE L1 591 5549 -334 6 962 6869 82 9 5 chr15 49493705 49494650 -54000324 + L1Md_F2 LINE L1 5620 6568 -14 6 962 511 301 46 45 chr15 49494667 49495045 -53999929 - L1_Mur3 LINE L1 -2265 3878 3501 6 962 519 208 30 8 chr15 49495328 49495459 -53999515 + Lx7 LINE L1 5708 5841 -1855 6 962 822 346 111 52 chr15 49495667 49496471 -53998503 + Lx8 LINE L1 6340 7190 -283 6 962 2248 239 99 44 chr15 49496517 49497629 -53997345 + RLTR22_Mur LTR ERVK 1 1342 -506 6 962 459 35 0 0 chr15 49497629 49497686 -53997288 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 962 2146 246 132 32 chr15 49497686 49498118 -53996856 + RLTR22_Mur LTR ERVK 1343 1812 -36 6 962 4086 259 129 9 chr15 49498527 49499745 -53995229 - Lx6 LINE L1 0 7460 6097 6 962 478 232 176 2 chr15 49499795 49499966 -53995008 - Lx6 LINE L1 -1507 5953 5759 6 962 8545 208 41 31 chr15 49500123 49500299 -53994675 - L1_Mur3 LINE L1 -1246 4634 4452 1 962 2400 143 58 68 chr15 49500299 49500786 -53994188 - RLTR45 LTR ERVK 0 482 1 2 962 8545 208 41 31 chr15 49500786 49502319 -53992655 - L1_Mur3 LINE L1 -1429 4451 2916 1 962 464 0 0 18 chr15 49502319 49502376 -53992598 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 962 8545 208 41 31 chr15 49502376 49502845 -53992129 - L1_Mur3 LINE L1 -2965 2915 2434 1 962 3163 85 98 6 chr15 49502850 49503321 -53991653 + LTRIS2 LTR ERV1 5 518 -46 4 962 3007 66 10 5 chr15 49503354 49503748 -53991226 + MTA_Mm LTR MaLR 1 396 0 5 962 657 69 0 0 chr15 49504396 49504483 -53990491 + (TA)n Simple_repeat Simple_repeat 1 87 0 6 962 1058 170 5 0 chr15 49504488 49504682 -53990292 + L1_Mur3 LINE L1 4136 4330 -1550 7 962 1511 218 98 53 chr15 49504794 49505454 -53989520 - RMER6C LTR ERVK 0 690 1 8 962 236 226 16 0 chr15 49505543 49505605 -53989369 + (TA)n Simple_repeat Simple_repeat 1 63 0 9 962 1814 191 41 38 chr15 49506936 49506994 -53987980 - ORR1B1 LTR MaLR 0 394 332 1 962 681 24 0 0 chr15 49506994 49507077 -53987897 + (CAAAC)n Simple_repeat Simple_repeat 2 84 0 1 962 1814 191 41 38 chr15 49507077 49507411 -53987563 - ORR1B1 LTR MaLR -63 331 2 1 962 189 0 0 0 chr15 49508317 49508338 -53986636 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1 962 22 0 0 0 chr15 49508991 49509013 -53985961 + AT_rich Low_complexity Low_complexity 1 22 0 1 962 267 349 18 0 chr15 49509190 49509299 -53985675 - Lx8 LINE L1 -519 6954 6844 1 962 2207 51 4 0 chr15 49509298 49509573 -53985401 - L1Md_F2 LINE L1 -477 6105 5830 1 962 3754 52 14 2 chr15 49509573 49510056 -53984918 + L1Md_F2 LINE L1 6094 6582 0 1 962 314 335 29 29 chr15 49510062 49510237 -53984737 - Lx8 LINE L1 -616 6857 6683 1 962 228 337 102 37 chr15 49510782 49510998 -53983976 + Lx8 LINE L1 7244 7473 0 1 962 22 35 0 0 chr15 49511038 49511067 -53983907 + AT_rich Low_complexity Low_complexity 1 29 0 1 962 195 129 0 0 chr15 49512849 49512880 -53982094 + (GGA)n Simple_repeat Simple_repeat 1 31 0 1 962 227 326 0 0 chr15 49513087 49513173 -53981801 + (TA)n Simple_repeat Simple_repeat 2 87 0 1 962 2254 240 42 17 chr15 49513329 49513859 -53981115 - RLTR20B2 LTR ERVK 0 560 18 2 962 252 288 0 0 chr15 49513876 49513935 -53981039 + GA-rich Low_complexity Low_complexity 5 63 0 2 962 588 101 0 0 chr15 49514027 49514116 -53980858 + (TA)n Simple_repeat Simple_repeat 2 90 0 2 962 1420 181 46 0 chr15 49514380 49514639 -53980335 - Lx3C LINE L1 -2 6974 6704 2 962 717 120 0 0 chr15 49514639 49514772 -53980202 + (TC)n Simple_repeat Simple_repeat 2 134 0 2 962 22 0 0 0 chr15 49515560 49515582 -53979392 + AT_rich Low_complexity Low_complexity 1 22 0 2 962 189 0 0 0 chr15 49516729 49516750 -53978224 + (TA)n Simple_repeat Simple_repeat 2 22 0 2 962 630 335 20 10 chr15 49516889 49517085 -53977889 - B3A SINE B2 0 198 1 2 962 224 119 32 48 chr15 49518234 49518296 -53976678 + (TTATA)n Simple_repeat Simple_repeat 3 63 0 2 962 957 261 65 111 chr15 49518376 49518825 -53976149 + RLTR23 LTR ERV1 3 430 0 2 962 279 0 0 0 chr15 49518837 49518868 -53976106 + (A)n Simple_repeat Simple_repeat 1 31 0 3 962 964 323 48 24 chr15 49518877 49519296 -53975678 - Lx7 LINE L1 -382 7314 6886 3 962 237 214 0 41 chr15 49519331 49519404 -53975570 + (TTTG)n Simple_repeat Simple_repeat 3 72 0 3 962 23 54 0 0 chr15 49519539 49519576 -53975398 + AT_rich Low_complexity Low_complexity 1 37 0 3 962 354 100 0 0 chr15 49520338 49520398 -53974576 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 962 528 68 0 0 chr15 49520891 49520964 -53974010 + (CA)n Simple_repeat Simple_repeat 2 74 0 3 962 474 96 0 0 chr15 49520964 49521036 -53973938 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 3 962 21 57 0 0 chr15 49521705 49521740 -53973234 + AT_rich Low_complexity Low_complexity 1 35 0 3 962 25 75 0 0 chr15 49522113 49522166 -53972808 + AT_rich Low_complexity Low_complexity 1 53 0 3 962 336 122 0 0 chr15 49522236 49522285 -53972689 - L1_Mur3 LINE L1 -741 5139 5091 3 962 2981 186 23 16 chr15 49522600 49523167 -53971807 - Lx2B LINE L1 -75 6925 6355 4 962 4358 159 55 4 chr15 49523157 49523976 -53970998 - L1_Mur1 LINE L1 -381 5496 4636 4 962 378 0 0 0 chr15 49523979 49524021 -53970953 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 4 962 3766 57 0 2 chr15 49524036 49524515 -53970459 - L1Md_F2 LINE L1 -11 6571 6094 4 962 10875 70 26 26 chr15 49524515 49526062 -53968912 + L1_Mm LINE L1 2559 4104 -1779 4 962 683 138 37 37 chr15 49526031 49526166 -53968808 - L1_Mur1 LINE L1 -1376 4501 4367 4 962 13162 182 30 5 chr15 49526164 49526714 -53968260 - L1_Mur1 LINE L1 -1841 4045 3479 4 962 441 0 0 0 chr15 49526714 49526763 -53968211 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 4 962 13162 182 35 6 chr15 49526763 49529215 -53965759 - L1_Mur1 LINE L1 -2408 3478 945 4 962 241 196 0 21 chr15 49529299 49529346 -53965628 + Lx4B LINE L1 6316 6361 -697 4 962 1626 235 162 25 chr15 49529366 49529877 -53965097 + Lx4B LINE L1 6473 7053 -5 4 962 27 62 0 0 chr15 49529909 49529957 -53965017 + AT_rich Low_complexity Low_complexity 1 48 0 4 962 201 164 32 32 chr15 49529999 49530062 -53964912 + (TATATG)n Simple_repeat Simple_repeat 3 65 0 4 962 23 33 0 0 chr15 49530148 49530178 -53964796 + AT_rich Low_complexity Low_complexity 1 30 0 4 962 322 368 33 11 chr15 49530726 49530910 -53964064 - L2 LINE L2 -956 2463 2276 5 962 535 240 0 39 chr15 49531613 49531769 -53963205 + Lx9 LINE L1 7478 7627 -17 5 962 23 68 0 0 chr15 49531771 49531815 -53963159 + AT_rich Low_complexity Low_complexity 1 44 0 5 962 252 394 55 0 chr15 49532151 49532278 -53962696 + ID_B1 SINE B4 91 224 0 5 962 1634 248 71 55 chr15 49532372 49532450 -53962524 + RMER19C LTR ERVK 109 207 -404 5 962 213 39 0 0 chr15 49532450 49532476 -53962498 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 962 1634 248 71 55 chr15 49532476 49532892 -53962082 + RMER19C LTR ERVK 208 610 -1 5 962 21 36 0 0 chr15 49532912 49532940 -53962034 + AT_rich Low_complexity Low_complexity 1 28 0 5 962 39 68 0 0 chr15 49534209 49534283 -53960691 + AT_rich Low_complexity Low_complexity 1 74 0 5 962 352 269 184 41 chr15 49534328 49534622 -53960352 + L1M5 LINE L1 2894 3229 -2917 5 962 2412 172 27 21 chr15 49536188 49536810 -53958164 - RMER17B LTR ERVK 0 958 287 5 962 28352 96 31 5 chr15 49536814 49541667 -53953307 + L1Md_F2 LINE L1 382 5360 -523 6 962 6018 79 1 4 chr15 49541667 49542477 -53952497 + L1Md_F2 LINE L1 5761 6568 -14 6 962 1928 134 28 13 chr15 49542485 49542802 -53952172 - RMER17B LTR ERVK -636 322 1 5 962 360 0 0 0 chr15 49543568 49543608 -53951366 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 962 954 321 42 3 chr15 49543803 49544087 -53950887 + ORR1D2 LTR MaLR 1 295 -75 6 962 2585 106 0 0 chr15 49544091 49544449 -53950525 + L1_Mm LINE L1 5422 5779 -104 6 962 1900 149 39 12 chr15 49544444 49544777 -53950197 + Lx2 LINE L1 6302 6643 -354 6 962 1099 154 67 0 chr15 49544777 49544985 -53949989 + Lx2 LINE L1 6775 6996 -1 6 962 235 169 32 48 chr15 49545008 49545070 -53949904 + ORR1D2 LTR MaLR 283 343 -27 6 962 207 0 0 0 chr15 49545080 49545103 -53949871 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 963 634 227 71 38 chr15 49545234 49545337 -53949637 + Lx9 LINE L1 7382 7481 -163 6 963 1085 123 0 6 chr15 49545337 49545517 -53949457 + (TATATG)n Simple_repeat Simple_repeat 1 179 0 6 963 634 227 71 38 chr15 49545517 49545651 -53949323 + Lx9 LINE L1 7482 7627 -17 6 963 1050 97 0 0 chr15 49545655 49545799 -53949175 - B1_Mm SINE Alu -3 144 1 6 963 27 29 0 0 chr15 49545799 49545833 -53949141 + AT_rich Low_complexity Low_complexity 1 34 0 6 963 2837 167 151 42 chr15 49545842 49546659 -53948315 - RMER17A2 LTR ERVK 0 906 1 7 963 23 0 0 0 chr15 49547110 49547133 -53947841 + AT_rich Low_complexity Low_complexity 1 23 0 7 963 737 236 134 26 chr15 49547539 49547947 -53947027 + RLTR20A2 LTR ERVK 2 578 0 7 963 227 236 37 19 chr15 49548101 49548209 -53946765 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 7 963 5151 248 84 30 chr15 49548215 49550642 -53944332 - Lx6 LINE L1 -335 7125 4445 7 963 439 333 11 107 chr15 49551204 49551382 -53943592 + B3A SINE B2 2 162 -36 7 963 21 57 0 0 chr15 49551719 49551754 -53943220 + AT_rich Low_complexity Low_complexity 1 35 0 7 963 248 0 31 0 chr15 49553112 49553144 -53941830 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 963 202 176 67 0 chr15 49553144 49553263 -53941711 + (TA)n Simple_repeat Simple_repeat 1 127 0 7 963 344 226 8 0 chr15 49553295 49553419 -53941555 + (TA)n Simple_repeat Simple_repeat 2 126 0 7 963 838 201 58 21 chr15 49554251 49554439 -53940535 + B2_Mm2 SINE B2 1 195 0 7 963 1652 233 59 33 chr15 49554549 49554775 -53940199 - RMER10A LTR ERVL -1 441 217 8 963 2968 87 22 14 chr15 49554775 49555219 -53939755 + L1Md_F2 LINE L1 6133 6580 -2 8 963 1652 233 59 33 chr15 49555219 49555414 -53939560 - RMER10A LTR ERVL -226 216 9 8 963 3184 128 97 61 chr15 49555515 49556240 -53938734 + RMER17A LTR ERVK 1 751 0 8 963 822 223 112 28 chr15 49556285 49556571 -53938403 + L1_Mur3 LINE L1 3656 3965 -1915 8 963 433 178 151 2 chr15 49556867 49556965 -53938009 + MTC LTR MaLR 3 111 -285 8 963 1041 216 57 54 chr15 49556965 49557263 -53937711 - RMER1C Other Other -6 1336 1038 8 963 1311 298 69 17 chr15 49557265 49557729 -53937245 - Lx6 LINE L1 -26 7434 6947 8 963 256 136 16 33 chr15 49557736 49557797 -53937177 + RMER3D-int LTR ERVK 1193 1252 -1074 8 963 3460 196 41 53 chr15 49557780 49558728 -53936246 + RMER3D-int LTR ERVK 1906 2842 0 8 963 2177 144 84 8 chr15 49558728 49558918 -53936056 + BGLII_Mus LTR ERVK 1 190 -232 8 963 603 0 0 0 chr15 49558918 49558985 -53935989 + (GA)n Simple_repeat Simple_repeat 1 67 0 8 963 2177 144 84 8 chr15 49558985 49559186 -53935788 + BGLII_Mus LTR ERVK 191 422 0 8 963 849 213 45 9 chr15 49559198 49559421 -53935553 - L1_Mur2 LINE L1 -601 5276 5046 8 963 735 313 43 6 chr15 49559423 49559701 -53935273 - RMER1C Other Other -300 1042 760 8 963 337 174 0 12 chr15 49559735 49559804 -53935170 + MTD LTR MaLR 303 419 0 9 963 21 57 0 0 chr15 49559858 49559893 -53935081 + AT_rich Low_complexity Low_complexity 1 35 0 9 963 201 122 24 24 chr15 49560064 49560106 -53934868 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 9 963 596 50 12 0 chr15 49560856 49560936 -53934038 + (TC)n Simple_repeat Simple_repeat 1 81 0 9 963 1114 284 41 37 chr15 49560941 49561401 -53933573 - Lx7 LINE L1 -291 7405 6944 9 963 240 59 0 0 chr15 49561437 49561471 -53933503 + (T)n Simple_repeat Simple_repeat 1 34 0 9 963 609 273 0 20 chr15 49561493 49561639 -53933335 - RLTR20D LTR ERVK -13 565 423 9 963 772 265 44 71 chr15 49561620 49561916 -53933058 - RLTR20D LTR ERVK -277 291 4 9 963 1411 206 84 35 chr15 49561973 49562435 -53932539 - MYSERV16_I-int LTR ERVK -21 2305 1821 9 963 1250 167 25 4 chr15 49562438 49562673 -53932301 - L1_Mus3 LINE L1 -5 6633 6394 9 963 1992 68 0 0 chr15 49562676 49562925 -53932049 + L1_Mm LINE L1 5389 5637 -246 9 963 1599 150 182 0 chr15 49562925 49563312 -53931662 - MYSERV16_I-int LTR ERVK -496 1830 1373 9 963 1139 145 54 0 chr15 49563323 49563564 -53931410 - MYSERV16_I-int LTR ERVK -1015 1311 1058 9 963 1836 176 109 50 chr15 49563560 49564038 -53930936 - MYSERV16_I-int LTR ERVK -1392 934 429 9 963 4654 109 68 1 chr15 49564052 49564757 -53930217 + L1_Mus4 LINE L1 5656 6407 -229 9 963 564 15 0 0 chr15 49565071 49565136 -53929838 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 963 222 37 0 0 chr15 49565136 49565162 -53929812 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1 963 3132 34 161 2 chr15 49565226 49565636 -53929338 - IAPLTR2_Mm LTR ERVK 0 475 1 1 963 13657 78 9 8 chr15 49565638 49567460 -53927514 - IAPEz-int LTR ERVK -2 6479 4656 1 963 1555 93 0 0 chr15 49567459 49567663 -53927311 - IAPEz-int LTR ERVK -5183 2497 2294 1 963 7873 82 63 93 chr15 49567656 49569005 -53925969 - IAPEz-int LTR ERVK -5164 1317 9 1 963 2920 35 105 0 chr15 49569006 49569378 -53925596 - IAPLTR2a LTR ERVK 0 411 1 1 963 393 70 0 0 chr15 49569915 49569972 -53925002 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 963 24 32 0 0 chr15 49570212 49570243 -53924731 + AT_rich Low_complexity Low_complexity 1 31 0 1 963 265 105 0 0 chr15 49571007 49571045 -53923929 + Lx LINE L1 5738 5775 -879 1 963 240 159 23 0 chr15 49571013 49571057 -53923917 + Lx7 LINE L1 5742 5786 -1910 1 963 182 116 23 0 chr15 49571058 49571101 -53923873 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 1 963 1773 125 105 0 chr15 49571800 49572096 -53922878 - Lx LINE L1 -5 6649 6323 1 963 7191 183 18 11 chr15 49572096 49572426 -53922548 + L1_Mm LINE L1 4221 4554 -1329 1 963 912 183 30 141 chr15 49572426 49572788 -53922186 - RLTRETN_Mm LTR ERVK 0 322 1 1 963 7191 183 18 11 chr15 49572788 49572843 -53922131 + L1_Mm LINE L1 4555 4603 -1280 1 963 231 36 0 0 chr15 49572843 49572871 -53922103 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1 963 7191 183 18 11 chr15 49572871 49573907 -53921067 + L1_Mm LINE L1 4604 5652 -231 1 963 816 216 24 0 chr15 49573895 49574062 -53920912 + Lx4B LINE L1 6396 6566 -492 1 963 214 300 0 0 chr15 49574399 49574459 -53920515 + B4A SINE B4 3 62 -230 1 963 9013 233 80 126 chr15 49574868 49577239 -53917735 - Lx6 LINE L1 -2 7458 4904 1 963 457 276 16 70 chr15 49577239 49577426 -53917548 - RNLTR23 LTR ERVK 0 642 466 1 963 9013 233 80 126 chr15 49577426 49579746 -53915228 - Lx6 LINE L1 -2557 4903 2404 1 963 627 235 73 0 chr15 49579746 49579882 -53915092 + MTC LTR MaLR 40 185 -236 1 963 9013 233 80 126 chr15 49579882 49579963 -53915011 - Lx6 LINE L1 -5057 2403 2317 1 963 923 248 36 22 chr15 49579963 49580186 -53914788 + MTC LTR MaLR 196 421 0 1 963 9013 233 80 126 chr15 49580186 49582284 -53912690 - Lx6 LINE L1 -2 2316 51 1 963 369 0 0 0 chr15 49582337 49582378 -53912596 + (TAA)n Simple_repeat Simple_repeat 3 43 0 1 963 180 0 0 0 chr15 49582378 49582398 -53912576 + (TTA)n Simple_repeat Simple_repeat 1 20 0 1 963 282 29 0 0 chr15 49582896 49582931 -53912043 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 1 963 238 407 92 38 chr15 49584678 49584918 -53910056 - B4A SINE B4 -18 274 22 1 963 738 211 0 0 chr15 49585108 49585288 -53909686 + (CATA)n Simple_repeat Simple_repeat 1 180 0 1 963 499 213 28 11 chr15 49585305 49585481 -53909493 + (CATA)n Simple_repeat Simple_repeat 2 180 0 1 963 683 233 0 11 chr15 49585465 49585647 -53909327 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 1 963 656 224 0 11 chr15 49585688 49585869 -53909105 + (CATA)n Simple_repeat Simple_repeat 2 180 0 1 963 992 146 6 0 chr15 49585884 49586062 -53908912 + (CATA)n Simple_repeat Simple_repeat 2 180 0 1 963 845 163 0 9 chr15 49586094 49586311 -53908663 + (CATA)n Simple_repeat Simple_repeat 1 214 0 1 963 5070 135 48 36 chr15 49586650 49587541 -53907433 + RMER17A2 LTR ERVK 1 902 -4 1 963 305 308 10 0 chr15 49587544 49587648 -53907326 + ID_B1 SINE B4 107 211 -13 1 963 224 0 65 0 chr15 49587848 49587879 -53907095 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 1 963 1145 55 0 7 chr15 49587881 49588029 -53906945 - B1_Mm SINE Alu 0 147 1 1 963 226 183 74 21 chr15 49588050 49588145 -53906829 + (TCTA)n Simple_repeat Simple_repeat 2 101 0 1 963 26 88 0 0 chr15 49589060 49589128 -53905846 + AT_rich Low_complexity Low_complexity 1 68 0 1 963 321 190 0 0 chr15 49589336 49589436 -53905538 + (TA)n Simple_repeat Simple_repeat 2 101 0 1 963 2760 142 32 0 chr15 49591396 49591838 -53903136 - Lx2 LINE L1 -220 6777 6322 1 963 252 77 0 0 chr15 49591857 49591896 -53903078 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 963 1043 111 0 0 chr15 49591896 49592040 -53902934 - B1_Mus1 SINE Alu -3 145 2 1 963 351 65 0 0 chr15 49592124 49592170 -53902804 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 963 4027 11 62 0 chr15 49592559 49593023 -53901951 - MT2_Mm LTR ERVL 0 493 1 1 963 1385 215 134 43 chr15 49593211 49593673 -53901301 + RMER6C LTR ERVK 1 504 -186 1 963 1297 138 9 0 chr15 49593674 49593891 -53901083 - L1_Mm LINE L1 -421 5462 5244 1 963 3493 132 27 19 chr15 49593891 49594478 -53900496 + Lx LINE L1 6063 6654 0 1 963 417 277 11 88 chr15 49594497 49594679 -53900295 - RMER17A-int LTR ERVK -1529 199 32 1 963 1745 264 62 139 chr15 49594702 49595735 -53899239 - RMER13B LTR ERVK -9 899 1 1 963 237 267 58 51 chr15 49595822 49595960 -53899014 - Lx8 LINE L1 -1259 6214 6076 1 963 623 305 136 20 chr15 49595973 49596327 -53898647 + Lx8 LINE L1 6931 7325 -148 1 963 2150 169 27 12 chr15 49596867 49597280 -53897694 - Lx2B LINE L1 0 7000 6582 1 963 686 260 165 13 chr15 49597298 49597528 -53897446 + ORR1D2 LTR MaLR 1 265 -105 1 963 198 0 0 0 chr15 49597938 49597960 -53897014 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 963 399 21 0 0 chr15 49599646 49599694 -53895280 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 963 180 0 0 0 chr15 49599694 49599714 -53895260 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 963 229 342 134 71 chr15 49599948 49600187 -53894787 + L2c LINE L2 3133 3386 -1 1 963 216 217 0 16 chr15 49600480 49600541 -53894433 + T-rich Low_complexity Low_complexity 1 60 0 1 963 9357 111 21 13 chr15 49600543 49602640 -53892334 - Lx3_Mus LINE L1 -8 7001 4885 1 963 2404 93 8 14 chr15 49602638 49602997 -53891977 + Lx3_Mus LINE L1 4526 4882 -1004 1 963 5065 209 31 26 chr15 49604082 49605196 -53889778 + L1_Mur2 LINE L1 940 2051 -3826 1 963 498 17 0 0 chr15 49605196 49605255 -53889719 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 963 5065 216 11 39 chr15 49605255 49605737 -53889237 + L1_Mur2 LINE L1 2052 2496 -3381 1 963 911 284 35 22 chr15 49606252 49606482 -53888492 - Lx7 LINE L1 -1024 6672 6440 1 963 1128 249 46 66 chr15 49606538 49606930 -53888044 + L1VL2 LINE L1 67 450 -5885 1 963 14970 197 61 51 chr15 49606936 49608865 -53886109 + Lx4A LINE L1 1473 3411 -2472 1 963 4125 63 2 4 chr15 49608865 49609392 -53885582 - L1Md_F2 LINE L1 0 6582 6057 1 963 14970 175 55 23 chr15 49609392 49612915 -53882059 + Lx4A LINE L1 3412 7057 -1 1 963 396 220 28 0 chr15 49612964 49613073 -53881901 - Lx7 LINE L1 -1894 5802 5691 1 963 336 358 38 13 chr15 49613071 49613377 -53881597 + Lx7 LINE L1 6954 7286 -187 1 963 730 319 18 2 chr15 49613698 49613894 -53881080 + B3 SINE B2 1 198 0 1 963 2801 45 0 0 chr15 49615754 49616086 -53878888 - IAPEY3_LTR LTR ERVK 0 332 1 1 963 23338 82 29 3 chr15 49616086 49620097 -53874877 - IAPEY3-int LTR ERVK 0 7680 1 1 963 2838 42 0 0 chr15 49620098 49620429 -53874545 - IAPEY3_LTR LTR ERVK -1 331 1 1 963 22 0 0 0 chr15 49620515 49620537 -53874437 + AT_rich Low_complexity Low_complexity 1 22 0 1 963 275 103 0 0 chr15 49620571 49620610 -53874364 + Lx2 LINE L1 6522 6560 -440 1 963 611 262 11 126 chr15 49620582 49620853 -53874121 + Lx2 LINE L1 6747 6986 -11 1 963 31 0 0 0 chr15 49620853 49620884 -53874090 + AT_rich Low_complexity Low_complexity 1 31 0 1 963 314 224 27 144 chr15 49620997 49621065 -53873909 - RMER10A LTR ERVL 0 442 380 1 963 201 94 0 0 chr15 49621065 49621097 -53873877 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 963 314 224 27 144 chr15 49621097 49621174 -53873800 - RMER10A LTR ERVL -63 379 314 1 963 1035 153 26 11 chr15 49622633 49622824 -53872150 + RMER17B LTR ERVK 761 954 -4 1 963 1622 213 36 61 chr15 49623091 49623536 -53871438 + RMER17B LTR ERVK 3 436 -522 1 963 1119 274 33 78 chr15 49623556 49623979 -53870995 + RMER13B LTR ERVK 315 718 -190 1 963 400 373 60 15 chr15 49624291 49624558 -53870416 - MER110 LTR ERV1 -207 284 6 1 963 2021 224 41 74 chr15 49627074 49627590 -53867384 + RLTR18 LTR ERVK 1 499 -117 1 963 252 106 149 0 chr15 49627597 49627644 -53867330 - RMER15 LTR ERVL -120 455 402 1 963 4875 49 0 0 chr15 49628102 49628709 -53866265 - L1_Mm LINE L1 -479 5404 4798 1 963 982 56 130 0 chr15 49628709 49628871 -53866103 + L1Md_F3 LINE L1 6402 6584 0 1 963 287 246 82 7 chr15 49628894 49629029 -53865945 + L1M2 LINE L1 5130 5274 -869 1 963 594 315 60 21 chr15 49629194 49629628 -53865346 + L1M2 LINE L1 5324 5774 -526 1 963 484 314 16 8 chr15 49629704 49629829 -53865145 - B1_Mur1 SINE Alu -7 142 17 1 963 245 286 0 83 chr15 49629858 49630003 -53864971 + L1M2 LINE L1 5770 5902 -398 1 963 32 86 0 0 chr15 49631169 49631250 -53863724 + AT_rich Low_complexity Low_complexity 1 81 0 1 963 180 234 0 0 chr15 49632130 49632177 -53862797 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 963 272 311 80 24 chr15 49632334 49632459 -53862515 + RMER1C Other Other 32 163 -1179 1 963 1357 275 12 103 chr15 49632491 49632978 -53861996 + RMER1C Other Other 610 1052 -290 1 963 463 328 62 15 chr15 49632994 49633189 -53861785 + Lx5 LINE L1 6843 7046 -4 1 963 998 200 96 44 chr15 49633200 49633472 -53861502 + RMER1C Other Other 1049 1334 -8 1 963 32 75 0 36 chr15 49633861 49633972 -53861002 + AT_rich Low_complexity Low_complexity 1 107 0 1 963 427 336 128 19 chr15 49635072 49635485 -53859489 - Lx8 LINE L1 -28 7445 6988 1 963 337 289 54 95 chr15 49636626 49636794 -53858180 + MLT1A0 LTR MaLR 63 223 -142 1 963 21 71 0 0 chr15 49637937 49637979 -53856995 + AT_rich Low_complexity Low_complexity 1 42 0 1 963 214 296 0 0 chr15 49638613 49638657 -53856317 - ID4 SINE ID -24 59 16 1 963 450 36 0 0 chr15 49639266 49639322 -53855652 + (TA)n Simple_repeat Simple_repeat 1 56 0 1 963 3050 34 10 18 chr15 49639727 49640112 -53854862 - L1Md_F3 LINE L1 -21 6563 6182 1 963 435 343 7 7 chr15 49640317 49640452 -53854522 + B3 SINE B2 7 141 -75 1 963 351 0 0 0 chr15 49640484 49640523 -53854451 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 1 963 21 36 0 0 chr15 49640642 49640670 -53854304 + AT_rich Low_complexity Low_complexity 1 28 0 1 963 813 202 20 0 chr15 49640994 49641154 -53853820 + ORR1D1 LTR MaLR 1 175 -184 1 963 768 32 0 0 chr15 49641154 49641249 -53853725 + (TC)n Simple_repeat Simple_repeat 2 96 0 1 963 549 333 123 22 chr15 49641249 49641290 -53853684 + ORR1D1 LTR MaLR 176 217 -142 1 963 249 33 0 0 chr15 49641290 49641320 -53853654 + (CCTG)n Simple_repeat Simple_repeat 1 30 0 1 963 549 333 123 22 chr15 49641320 49641433 -53853541 + ORR1D1 LTR MaLR 218 347 -12 1 963 275 0 0 28 chr15 49641946 49641982 -53852992 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 963 815 309 131 81 chr15 49644077 49644777 -53850197 + RMER13A LTR ERVK 1 735 -125 1 963 1029 95 7 13 chr15 49645202 49645351 -53849623 - B1_Mus1 SINE Alu 0 148 1 1 963 399 91 0 0 chr15 49645536 49645591 -53849383 - ORR1B1 LTR MaLR 0 394 340 1 963 285 288 75 15 chr15 49645602 49645736 -53849238 - Lx4B LINE L1 -8 7050 6909 1 963 1516 168 29 101 chr15 49645738 49646083 -53848891 - ORR1B1 LTR MaLR -34 360 41 1 963 969 279 54 13 chr15 49646138 49646534 -53848440 + Lx9 LINE L1 5502 5957 -1687 1 963 272 245 0 0 chr15 49648138 49648187 -53846787 - AmnSINE1 SINE SINE -489 86 38 2 963 289 329 63 34 chr15 49648239 49648478 -53846496 + Lx9 LINE L1 7218 7463 -10 1 963 21 36 0 0 chr15 49648554 49648582 -53846392 + AT_rich Low_complexity Low_complexity 1 28 0 2 963 841 176 6 6 chr15 49649399 49649576 -53845398 + A-rich Low_complexity Low_complexity 4 180 0 2 963 290 380 9 9 chr15 49649581 49649690 -53845284 + B1F2 SINE Alu 1 109 -40 2 963 211 373 73 7 chr15 49649690 49649732 -53845242 + B4A SINE B4 86 246 -46 2 963 239 277 15 11 chr15 49649824 49649910 -53845064 + L1M1 LINE L1 5668 5751 -561 2 963 260 296 16 31 chr15 49650043 49650172 -53844802 - L1M2 LINE L1 -1331 4812 4686 2 963 468 0 0 0 chr15 49650707 49650759 -53844215 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 963 29218 119 22 12 chr15 49651279 49653213 -53841761 + L1Md_F2 LINE L1 398 2346 -3537 2 963 261 0 0 0 chr15 49653213 49653242 -53841732 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 963 29218 99 11 6 chr15 49653242 49656458 -53838516 + L1Md_F2 LINE L1 2347 5585 -298 2 963 7475 72 0 8 chr15 49656458 49657450 -53837524 + L1Md_F2 LINE L1 5587 6570 -12 2 963 235 286 43 11 chr15 49657951 49658043 -53836931 + RMER5 LTR ERV1 13 107 -427 2 963 21 36 0 0 chr15 49658541 49658569 -53836405 + AT_rich Low_complexity Low_complexity 1 28 0 2 963 3515 142 7 16 chr15 49659264 49659845 -53835129 - Lx2 LINE L1 0 6997 6422 2 963 312 331 64 57 chr15 49660985 49661283 -53833691 + L1MB7 LINE L1 5089 5388 -758 2 963 448 92 0 26 chr15 49661397 49661475 -53833499 + Lx2 LINE L1 6922 6997 0 2 963 395 291 109 42 chr15 49661722 49662106 -53832868 + L1MB7 LINE L1 5488 5897 -287 2 963 403 356 23 44 chr15 49662398 49662596 -53832378 + B3A SINE B2 14 202 -14 2 963 189 214 0 0 chr15 49662645 49662687 -53832287 + GA-rich Low_complexity Low_complexity 2 43 0 2 963 198 71 0 0 chr15 49662856 49662884 -53832090 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 2 963 493 319 117 25 chr15 49663063 49663458 -53831516 + RMER5 LTR ERV1 81 511 -23 2 963 203 102 39 39 chr15 49664081 49664132 -53830842 + (TA)n Simple_repeat Simple_repeat 2 52 0 2 963 1804 283 49 46 chr15 49664908 49665157 -53829817 + Lx9 LINE L1 5011 5260 -587 2 963 531 0 0 0 chr15 49665157 49665216 -53829758 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 963 1804 282 53 48 chr15 49665216 49666014 -53828960 + Lx9 LINE L1 5261 6100 -1544 2 963 3993 90 4 0 chr15 49666103 49666657 -53828317 - Lx3_Mus LINE L1 -422 6587 6032 2 963 1354 126 5 5 chr15 49666652 49666859 -53828115 + Lx3_Mus LINE L1 6597 6803 -206 2 963 448 112 62 45 chr15 49666859 49666971 -53828003 + Lx3_Mus LINE L1 6896 7009 0 2 963 31 88 0 0 chr15 49667128 49667208 -53827766 + AT_rich Low_complexity Low_complexity 1 80 0 2 963 1202 255 34 7 chr15 49667237 49667533 -53827441 + Lx9 LINE L1 6371 6674 -970 2 963 1547 267 45 12 chr15 49667660 49668146 -53826828 + Lx9 LINE L1 6917 7418 -226 2 963 297 229 61 30 chr15 49668197 49668296 -53826678 + Lx9 LINE L1 7533 7634 -10 2 963 555 281 7 36 chr15 49668350 49668490 -53826484 - B3 SINE B2 -80 136 1 2 963 447 338 26 19 chr15 49668913 49669067 -53825907 - B3A SINE B2 -41 157 3 2 963 278 26 0 25 chr15 49669097 49669137 -53825837 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 963 354 325 115 0 chr15 49669660 49669895 -53825079 + L1MD3 LINE L1 7547 7928 -67 2 963 371 94 0 0 chr15 49669892 49669945 -53825029 + L1Md_F2 LINE L1 6093 6145 -437 2 963 413 100 0 41 chr15 49669953 49670026 -53824948 + L1Md_F2 LINE L1 6502 6571 -11 2 120 39481 28 7 6 chr15 49670055 49676422 -53818552 - L1Md_A LINE L1 0 6582 208 2 964 606 278 28 41 chr15 49676545 49676763 -53818211 - RCHARR1 DNA MER1_type -518 456 242 2 964 1364 247 67 88 chr15 49676805 49677399 -53817575 - RMER19C LTR ERVK 0 902 108 2 964 246 224 0 0 chr15 49677412 49677461 -53817513 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 2 964 23 78 0 0 chr15 49677676 49677727 -53817247 + AT_rich Low_complexity Low_complexity 1 51 0 2 964 408 364 21 0 chr15 49678169 49678309 -53816665 + RSINE1 SINE B4 9 151 -14 2 964 342 0 0 0 chr15 49678320 49678358 -53816616 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 964 551 341 53 18 chr15 49678391 49678672 -53816302 + Lx8 LINE L1 6827 7117 -356 2 964 3681 140 125 43 chr15 49679062 49679847 -53815127 - L1_Mus2 LINE L1 -6 6560 5712 2 964 1683 139 7 7 chr15 49679842 49680057 -53814917 + L1_Mm LINE L1 5237 5451 -432 2 964 236 0 88 0 chr15 49680057 49680091 -53814883 + (CAAAA)n Simple_repeat Simple_repeat 5 41 0 2 964 1683 139 7 7 chr15 49680091 49680164 -53814810 + L1_Mm LINE L1 5452 5524 -359 2 964 4859 140 47 19 chr15 49680410 49681241 -53813733 + Lx3B LINE L1 6117 6970 -3 2 964 910 79 21 7 chr15 49681321 49681461 -53813513 + (GGAGAA)n Simple_repeat Simple_repeat 4 145 0 2 964 11524 85 17 1 chr15 49682040 49684290 -53810684 - L1Md_F2 LINE L1 -7 6575 4285 2 964 7129 118 16 18 chr15 49684290 49686359 -53808615 - L1Md_F2 LINE L1 -3654 2229 163 2 964 23 0 0 0 chr15 49686670 49686693 -53808281 + AT_rich Low_complexity Low_complexity 1 23 0 2 964 432 0 0 0 chr15 49686823 49686871 -53808103 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 964 1319 243 36 32 chr15 49688631 49689043 -53805931 - Lx6 LINE L1 -1380 6080 5667 2 964 3559 258 94 16 chr15 49689043 49689347 -53805627 + Lx6 LINE L1 6356 6706 -754 2 964 3967 62 0 62 chr15 49689347 49689900 -53805074 - MURVY-LTR LTR ERV1 0 519 1 2 964 3559 258 94 16 chr15 49689900 49690620 -53804354 + Lx6 LINE L1 6707 7460 0 2 964 28 0 0 0 chr15 49690951 49690979 -53803995 + AT_rich Low_complexity Low_complexity 1 28 0 2 964 349 321 24 44 chr15 49691178 49691383 -53803591 + L1MA6 LINE L1 5863 6063 -237 2 964 342 341 54 38 chr15 49691618 49691717 -53803257 + Lx8 LINE L1 7076 7179 -294 2 964 2059 239 38 50 chr15 49691717 49692299 -53802675 - RMER15 LTR ERVL 0 575 1 2 964 342 341 54 38 chr15 49692299 49692385 -53802589 + Lx8 LINE L1 7180 7264 -209 2 964 986 179 17 154 chr15 49692573 49692871 -53802103 - RMER1C Other Other -2 1340 1084 2 964 520 40 27 0 chr15 49693008 49693083 -53801891 + (TA)n Simple_repeat Simple_repeat 2 78 0 2 964 1257 288 42 3 chr15 49694461 49694847 -53800127 + Lx9 LINE L1 6604 7004 -640 2 964 3276 237 26 36 chr15 49696158 49697017 -53797957 - L1_Mur2 LINE L1 -136 5741 4892 2 964 340 336 9 0 chr15 49697935 49698045 -53796929 - PB1D7 SINE Alu -2 118 8 2 964 28 0 0 0 chr15 49698082 49698110 -53796864 + AT_rich Low_complexity Low_complexity 1 28 0 2 964 25 51 0 0 chr15 49698125 49698164 -53796810 + AT_rich Low_complexity Low_complexity 1 39 0 2 964 2442 243 49 14 chr15 49698805 49699455 -53795519 - Lx2B LINE L1 -7 6993 6321 2 964 993 17 0 0 chr15 49699875 49699990 -53794984 + (CA)n Simple_repeat Simple_repeat 1 115 0 2 964 4617 155 129 12 chr15 49700158 49701073 -53793901 + Lx2 LINE L1 5974 6995 -2 2 964 21 36 0 0 chr15 49701073 49701101 -53793873 + AT_rich Low_complexity Low_complexity 1 28 0 2 964 261 0 0 0 chr15 49701422 49701451 -53793523 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2 964 775 286 90 114 chr15 49701737 49702104 -53792870 - MTE2a LTR MaLR 0 379 22 2 964 363 344 46 10 chr15 49702699 49702893 -53792081 - LTR82A LTR ERVL -592 280 80 2 964 28 71 0 0 chr15 49704318 49704374 -53790600 + AT_rich Low_complexity Low_complexity 1 56 0 2 964 236 188 16 0 chr15 49705922 49705986 -53788988 + GA-rich Low_complexity Low_complexity 6 70 0 2 964 234 290 127 27 chr15 49707383 49707493 -53787481 - MTEb LTR MaLR -5 374 254 2 964 735 72 0 0 chr15 49707583 49707680 -53787294 - RMER17A LTR ERVK -654 97 1 2 964 239 354 25 12 chr15 49707687 49707767 -53787207 + PB1D10 SINE Alu 5 85 -32 2 964 213 329 14 28 chr15 49707809 49707881 -53787093 + ID4_ SINE ID 2 72 -11 2 964 226 250 17 0 chr15 49707919 49707979 -53786995 + (TATATG)n Simple_repeat Simple_repeat 6 66 0 2 964 396 0 0 0 chr15 49708076 49708120 -53786854 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 2 964 236 196 0 35 chr15 49709207 49709265 -53785709 - L1_Mur2 LINE L1 -311 5575 5520 2 964 515 125 0 135 chr15 49709329 49709440 -53785534 - L1_Mur2 LINE L1 -614 5263 5168 2 964 1673 271 40 9 chr15 49709437 49709858 -53785116 + Lx5 LINE L1 6614 7047 -3 2 964 275 304 134 0 chr15 49710169 49710281 -53784693 + B3A SINE B2 23 149 -49 2 964 656 322 51 62 chr15 49710327 49710778 -53784196 - Lx9 LINE L1 -293 7351 6906 2 964 2064 210 105 36 chr15 49710982 49711516 -53783458 - Lx2B LINE L1 -5 6995 6425 2 964 2528 55 15 0 chr15 49711741 49712067 -53782907 - IAPEY_LTR LTR ERVK 0 385 55 2 964 328 118 29 0 chr15 49712087 49712155 -53782819 + (TA)n Simple_repeat Simple_repeat 1 70 0 2 964 297 0 0 0 chr15 49712155 49712188 -53782786 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 964 459 0 0 0 chr15 49712936 49712987 -53781987 + (TA)n Simple_repeat Simple_repeat 2 52 0 2 964 470 70 0 14 chr15 49712987 49713058 -53781916 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 964 649 86 39 0 chr15 49713145 49713273 -53781701 + (TAGA)n Simple_repeat Simple_repeat 2 134 0 2 964 2144 224 108 25 chr15 49713508 49714139 -53780835 + MERVL_2A-int LTR ERVL 4803 5485 -276 2 964 2730 195 59 48 chr15 49714140 49714425 -53780549 + L1_Mur2 LINE L1 5166 5446 -431 2 964 206 32 32 0 chr15 49714425 49714456 -53780518 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 964 2730 195 59 48 chr15 49714456 49714811 -53780163 + L1_Mur2 LINE L1 5447 5813 -64 2 964 3034 228 113 17 chr15 49714825 49715596 -53779378 + Lx5 LINE L1 6203 7047 -3 2 964 830 217 36 18 chr15 49715611 49715832 -53779142 + MERVL_2A-int LTR ERVL 5466 5690 -71 2 964 265 216 67 19 chr15 49715830 49715934 -53779040 + MERVL_2A-int LTR ERVL 5619 5727 -34 2 964 278 254 0 0 chr15 49715934 49715993 -53778981 + Lx6 LINE L1 6771 6829 -631 2 964 2791 167 74 36 chr15 49715993 49716086 -53778888 - RLTR20B3 LTR ERVK -2 575 471 2 964 636 74 0 0 chr15 49716086 49716181 -53778793 + (CA)n Simple_repeat Simple_repeat 2 96 0 2 964 522 0 0 0 chr15 49716181 49716238 -53778736 + (GA)n Simple_repeat Simple_repeat 2 59 0 2 964 2791 167 74 36 chr15 49716238 49716697 -53778277 - RLTR20B3 LTR ERVK -107 470 2 2 964 2084 240 131 16 chr15 49716698 49717269 -53777705 + Lx6 LINE L1 6823 7459 -1 2 964 480 311 75 35 chr15 49718918 49719318 -53775656 + L1MC LINE L1 5358 5773 -560 2 964 1947 151 43 3 chr15 49721009 49721334 -53773640 + ORR1A1 LTR MaLR 1 338 -8 2 964 31 0 0 0 chr15 49721494 49721525 -53773449 + AT_rich Low_complexity Low_complexity 1 31 0 2 964 292 301 52 31 chr15 49721525 49721621 -53773353 - PB1D10 SINE Alu -2 115 18 2 964 22 35 0 0 chr15 49722623 49722652 -53772322 + AT_rich Low_complexity Low_complexity 1 29 0 2 964 359 353 23 0 chr15 49723075 49723208 -53771766 - ID_B1 SINE B4 -2 222 87 2 964 25 65 0 0 chr15 49724239 49724285 -53770689 + AT_rich Low_complexity Low_complexity 1 46 0 2 964 348 83 0 0 chr15 49724398 49724446 -53770528 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 964 512 292 84 19 chr15 49724612 49724910 -53770064 - L1_Mur3 LINE L1 -139 5744 5399 3 964 201 39 0 0 chr15 49725341 49725367 -53769607 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 3 964 341 267 45 34 chr15 49726074 49726163 -53768811 - RSINE1 SINE B4 -31 134 45 3 964 200 203 43 0 chr15 49726360 49726429 -53768545 + (TTTAA)n Simple_repeat Simple_repeat 1 72 0 3 964 3640 275 54 12 chr15 49726429 49727442 -53767532 - Lx6 LINE L1 -41 7419 6364 3 964 673 342 68 54 chr15 49729265 49729694 -53765280 - Lx8 LINE L1 -303 7170 6736 3 964 22 35 0 0 chr15 49729914 49729943 -53765031 + AT_rich Low_complexity Low_complexity 1 29 0 3 964 297 109 0 0 chr15 49731798 49731853 -53763121 + (TTC)n Simple_repeat Simple_repeat 3 57 0 3 964 961 286 122 51 chr15 49731946 49732627 -53762347 + Lx9 LINE L1 6896 7624 -20 3 964 6958 74 1 0 chr15 49732734 49734050 -53760924 - L1Md_F2 LINE L1 -281 6301 4985 3 964 435 119 0 0 chr15 49734212 49734279 -53760695 + (TCC)n Simple_repeat Simple_repeat 3 69 0 3 964 1168 99 5 10 chr15 49735174 49735367 -53759607 - L1Md_F2 LINE L1 -2 6580 6389 3 964 22 35 0 0 chr15 49735452 49735481 -53759493 + AT_rich Low_complexity Low_complexity 1 29 0 3 964 1284 293 70 14 chr15 49736134 49736592 -53758382 + MT2A LTR ERVL 5 491 -42 3 964 231 36 0 0 chr15 49736592 49736620 -53758354 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 964 1284 293 70 14 chr15 49736620 49736660 -53758314 + MT2A LTR ERVL 492 531 -2 3 964 25 51 0 0 chr15 49737428 49737467 -53757507 + AT_rich Low_complexity Low_complexity 1 39 0 3 964 258 152 0 0 chr15 49737808 49737867 -53757107 + A-rich Low_complexity Low_complexity 1 59 0 3 964 453 297 124 60 chr15 49737911 49738176 -53756798 + RMER13A LTR ERVK 101 382 -478 3 964 1418 218 16 29 chr15 49739055 49739401 -53755573 - MTC LTR MaLR -65 331 3 3 964 816 202 92 36 chr15 49739597 49739900 -53755074 - Lx7 LINE L1 0 7696 7377 3 964 271 243 19 9 chr15 49739904 49740012 -53754962 + (TA)n Simple_repeat Simple_repeat 1 109 0 3 964 625 327 81 5 chr15 49740017 49740226 -53754748 - Lx6 LINE L1 -335 7125 6901 3 964 7059 48 6 2 chr15 49740457 49741333 -53753641 + L1Md_F2 LINE L1 5704 6582 0 3 964 26 0 0 0 chr15 49741649 49741675 -53753299 + AT_rich Low_complexity Low_complexity 1 26 0 3 964 3562 165 32 18 chr15 49741677 49742338 -53752636 - Lx2B LINE L1 -6 6994 6325 3 964 1410 200 48 0 chr15 49742339 49742634 -53752340 + Lx2 LINE L1 5976 6284 -713 3 964 30 69 0 0 chr15 49742700 49742758 -53752216 + AT_rich Low_complexity Low_complexity 1 58 0 3 964 3881 141 35 99 chr15 49743018 49743883 -53751091 + RMER17D2 LTR ERVK 1 809 0 3 964 248 164 49 0 chr15 49744058 49744119 -53750855 + (TA)n Simple_repeat Simple_repeat 1 64 0 3 964 216 186 0 0 chr15 49744327 49744370 -53750604 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 3 964 765 263 112 59 chr15 49746376 49746685 -53748289 - RLTR20B3 LTR ERVK -43 534 237 3 964 286 207 92 18 chr15 49746698 49746789 -53748185 + RLTR11A LTR ERVK 144 242 -286 3 964 991 223 82 22 chr15 49747200 49747517 -53747457 - RLTR15 LTR ERVK -18 341 6 3 964 2121 147 3 0 chr15 49749870 49750183 -53744791 - ORR1A2 LTR MaLR 0 327 14 3 964 1577 237 22 44 chr15 49750396 49750806 -53744168 - RLTR31_Mm LTR ERVK 0 561 161 3 964 1141 155 36 14 chr15 49750876 49751098 -53743876 - RMER3D-int LTR ERVK -1309 1533 1307 3 964 701 148 19 19 chr15 49751098 49751212 -53743762 + RLTR31_Mm LTR ERVK 2 113 -448 3 964 720 64 0 0 chr15 49751212 49751306 -53743668 + (GA)n Simple_repeat Simple_repeat 1 94 0 3 964 701 148 19 19 chr15 49751306 49751349 -53743625 + RLTR31_Mm LTR ERVK 114 158 -403 3 964 1597 199 66 64 chr15 49751319 49751787 -53743187 + RLTR31_Mm LTR ERVK 62 530 -31 3 964 3240 53 0 2 chr15 49752108 49752505 -53742469 - MTA_Mm LTR MaLR 0 396 1 3 964 24 85 0 0 chr15 49752562 49752621 -53742353 + AT_rich Low_complexity Low_complexity 1 59 0 3 964 337 402 67 8 chr15 49752699 49752967 -53742007 + MER47B DNA MER2_type 3 286 -132 3 964 4052 200 96 62 chr15 49753551 49753893 -53741081 + RLTR25A LTR ERVK 1 319 -784 3 964 297 0 0 0 chr15 49753893 49753926 -53741048 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 964 4052 200 96 62 chr15 49753926 49754650 -53740324 + RLTR25A LTR ERVK 320 1103 0 3 964 265 250 118 11 chr15 49754907 49755000 -53739974 + MLT1A LTR MaLR 266 368 -6 3 964 731 323 103 54 chr15 49755130 49755559 -53739415 - LTR40a LTR ERVL -14 505 56 3 964 522 151 0 0 chr15 49756449 49756555 -53738419 + CT-rich Low_complexity Low_complexity 1 106 0 3 964 237 277 74 65 chr15 49756642 49756750 -53738224 + MLT1A1 LTR MaLR 267 375 -33 3 964 1278 242 65 44 chr15 49756735 49757052 -53737922 + MTC LTR MaLR 6 323 -98 3 964 1083 63 51 0 chr15 49757052 49757210 -53737764 - L1Md_F3 LINE L1 -14 6570 6405 3 964 1278 242 65 44 chr15 49757210 49757259 -53737715 + MTC LTR MaLR 324 380 -41 3 964 33 25 0 0 chr15 49758237 49758277 -53736697 + AT_rich Low_complexity Low_complexity 1 40 0 3 964 3753 9 121 0 chr15 49758444 49758884 -53736090 + MT2_Mm LTR ERVL 1 493 0 3 964 28649 16 0 0 chr15 49758884 49762101 -53732873 + MERVL-int LTR ERVL 1 3216 -2269 3 964 12951 28 1 0 chr15 49762099 49763589 -53731385 + MERVL-int LTR ERVL 3870 5360 -125 3 964 392 167 46 35 chr15 49763589 49763676 -53731298 + ORR1A3-int LTR MaLR 553 640 -1323 3 964 314 0 0 0 chr15 49763676 49763714 -53731260 + MERVL-int LTR ERVL 5448 5485 0 3 964 4412 12 0 2 chr15 49763714 49764208 -53730766 + MT2_Mm LTR ERVL 1 493 0 3 964 2779 252 95 19 chr15 49764282 49765553 -53729421 - Lx7 LINE L1 -1664 6032 4671 3 964 919 302 33 20 chr15 49765844 49766148 -53728826 + Lx9 LINE L1 7107 7414 -230 3 964 223 167 30 0 chr15 49766187 49766253 -53728721 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 964 247 273 49 0 chr15 49766264 49766407 -53728567 + (TA)n Simple_repeat Simple_repeat 1 150 0 3 964 464 235 117 0 chr15 49766409 49766605 -53728369 + Lx9 LINE L1 7424 7642 -2 3 964 227 273 38 25 chr15 49766906 49766985 -53727989 - RLTR19C LTR ERVK -184 322 243 3 964 212 256 35 11 chr15 49767384 49767471 -53727503 + T-rich Low_complexity Low_complexity 3 91 0 3 964 390 354 37 6 chr15 49767759 49767921 -53727053 + B4A SINE B4 113 279 -13 3 964 248 281 48 81 chr15 49770545 49770669 -53724305 - Charlie10 DNA MER1_type -772 2050 1931 3 964 227 188 72 72 chr15 49770936 49771005 -53723969 + Charlie24 DNA MER1_type 2106 2174 -276 3 964 22 0 0 0 chr15 49771133 49771155 -53723819 + AT_rich Low_complexity Low_complexity 1 22 0 3 964 212 158 0 0 chr15 49771215 49771253 -53723721 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 964 219 146 0 0 chr15 49771391 49771432 -53723542 + (TTTTG)n Simple_repeat Simple_repeat 5 45 0 3 964 396 0 0 0 chr15 49771551 49771595 -53723379 + (TAA)n Simple_repeat Simple_repeat 1 44 0 3 964 280 330 90 5 chr15 49772116 49772317 -53722657 - MT2A LTR ERVL 0 554 305 3 964 3195 79 47 0 chr15 49772520 49772964 -53722010 - L1_Mus3 LINE L1 0 6638 6174 3 964 504 0 0 0 chr15 49772992 49773048 -53721926 + (TC)n Simple_repeat Simple_repeat 1 56 0 3 964 252 0 0 0 chr15 49773048 49773075 -53721899 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 964 514 268 104 52 chr15 49773879 49774072 -53720902 - ORR1D1 LTR MaLR -135 239 37 3 964 1145 209 70 35 chr15 49774073 49774266 -53720708 - ORR1D1-int LTR MaLR -5 1365 1157 3 964 2339 102 8 60 chr15 49774266 49774651 -53720323 - RLTR8 LTR ERVK 0 365 1 3 964 1145 209 70 35 chr15 49774651 49774770 -53720204 - ORR1D1-int LTR MaLR -214 1156 1042 3 964 183 80 0 0 chr15 49774782 49774807 -53720167 + (G)n Simple_repeat Simple_repeat 1 25 0 3 964 1950 280 87 85 chr15 49775440 49776244 -53718730 - ORR1D1-int LTR MaLR -305 1065 260 3 964 1813 118 0 7 chr15 49776244 49776518 -53718456 - L1_Mus4 LINE L1 -63 6573 6302 3 964 640 121 0 10 chr15 49776511 49776611 -53718363 + L1_Mus4 LINE L1 6159 6257 -379 3 964 1085 268 86 12 chr15 49776611 49776947 -53718027 - ORR1D1 LTR MaLR -6 368 8 3 964 31 26 0 0 chr15 49777237 49777275 -53717699 + AT_rich Low_complexity Low_complexity 1 38 0 3 964 23 92 0 0 chr15 49777816 49777881 -53717093 + AT_rich Low_complexity Low_complexity 1 65 0 3 964 21 0 0 0 chr15 49778015 49778036 -53716938 + AT_rich Low_complexity Low_complexity 1 21 0 3 964 202 109 0 61 chr15 49778126 49778175 -53716799 + (TTATA)n Simple_repeat Simple_repeat 2 47 0 3 964 459 0 0 0 chr15 49778434 49778485 -53716489 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 964 227 254 81 104 chr15 49778613 49778824 -53716150 + L1MC LINE L1 4999 5204 -942 3 964 305 305 79 26 chr15 49779049 49779353 -53715621 + L1MC LINE L1 5505 5826 -1959 3 964 4944 2 0 0 chr15 49779689 49780273 -53714701 - L1Md_A LINE L1 -660 5922 5339 3 964 5929 3 0 0 chr15 49780273 49780930 -53714044 + L1Md_A LINE L1 5926 6582 0 3 964 23 0 0 0 chr15 49781003 49781026 -53713948 + AT_rich Low_complexity Low_complexity 1 23 0 3 964 385 34 0 33 chr15 49781129 49781190 -53713784 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 3 964 33260 80 4 7 chr15 49781202 49787500 -53707474 - L1Md_F2 LINE L1 -13 6569 289 3 964 32870 110 18 7 chr15 49788493 49794791 -53700183 - L1Md_F2 LINE L1 -1 6581 1 3 964 424 233 130 49 chr15 49794807 49795003 -53699971 + Lx4B LINE L1 6743 7056 -2 3 964 301 305 148 30 chr15 49795135 49795270 -53699704 + MLT2C1 LTR ERVL 65 215 -182 3 964 2872 116 112 137 chr15 49795338 49796017 -53698957 + Lx LINE L1 5990 6651 -3 3 964 501 17 0 0 chr15 49796076 49796134 -53698840 + (GAAAA)n Simple_repeat Simple_repeat 2 59 0 3 964 21 57 0 0 chr15 49796260 49796295 -53698679 + AT_rich Low_complexity Low_complexity 1 35 0 3 964 819 55 27 0 chr15 49797201 49797311 -53697663 + B1_Mm SINE Alu 30 142 -5 3 964 21 57 0 0 chr15 49797330 49797365 -53697609 + AT_rich Low_complexity Low_complexity 1 35 0 3 964 725 258 114 8 chr15 49797489 49797735 -53697239 + Charlie1a DNA MER1_type 460 731 -724 3 964 23 0 0 0 chr15 49797763 49797786 -53697188 + AT_rich Low_complexity Low_complexity 1 23 0 3 964 1482 325 135 19 chr15 49797874 49798592 -53696382 - Lx7 LINE L1 -615 7081 6281 3 964 2058 137 44 62 chr15 49798619 49799009 -53695965 - RLTR9A2 LTR ERVK 0 383 1 3 964 1128 212 93 80 chr15 49799413 49799666 -53695308 - RLTR31A_Mm LTR ERVK 0 584 324 3 964 935 144 0 14 chr15 49799666 49799814 -53695160 - B1_Mus1 SINE Alu -1 147 2 3 964 1128 212 93 80 chr15 49799814 49799935 -53695039 - RLTR31A_Mm LTR ERVK -261 323 205 3 964 3066 98 19 66 chr15 49799937 49800450 -53694524 + RLTR1B LTR ERV1 1 489 -23 3 964 617 201 28 42 chr15 49800520 49800699 -53694275 + RLTR1B-int LTR ERV1 319 493 -4570 3 964 387 292 57 75 chr15 49801079 49801238 -53693736 + RLTR1B-int LTR ERV1 534 689 -2610 3 964 241 279 89 68 chr15 49801252 49801398 -53693576 - LSU-rRNA_Hsa rRNA rRNA -1737 3298 3150 3 964 1384 76 5 5 chr15 49801421 49801606 -53693368 + RLTR1B-int LTR ERV1 3038 3222 -77 3 964 593 109 7 36 chr15 49801611 49801759 -53693215 + RLTR1B-int LTR ERV1 3221 3299 0 3 964 3219 109 15 63 chr15 49801759 49802297 -53692677 + RLTR1B LTR ERV1 1 512 0 3 964 1061 183 14 34 chr15 49802297 49802506 -53692468 - RLTR31A_Mm LTR ERVK -378 206 2 3 964 23 54 0 0 chr15 49802626 49802663 -53692311 + AT_rich Low_complexity Low_complexity 1 37 0 4 964 444 51 0 0 chr15 49802756 49802815 -53692159 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 964 358 285 72 54 chr15 49802850 49803128 -53691846 + Charlie1a DNA MER1_type 1084 1366 -89 3 964 22 0 0 0 chr15 49803152 49803174 -53691800 + AT_rich Low_complexity Low_complexity 1 22 0 4 964 22 0 0 0 chr15 49803478 49803500 -53691474 + AT_rich Low_complexity Low_complexity 1 22 0 4 964 279 331 80 32 chr15 49804126 49804251 -53690723 - MLT1A1 LTR MaLR -140 268 138 4 964 1679 229 62 0 chr15 49804828 49805199 -53689775 + ORR1B1 LTR MaLR 1 394 0 4 964 2177 347 42 12 chr15 49805346 49806388 -53688586 + Lx8 LINE L1 6400 7472 -1 4 964 522 31 0 0 chr15 49807202 49807266 -53687708 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 4 120 4114 137 22 2 chr15 49807334 49807972 -53687002 + Lx2 LINE L1 6347 6997 0 4 965 243 0 0 0 chr15 49808806 49808833 -53686141 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 965 212 244 0 0 chr15 49810665 49810706 -53684268 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 965 473 341 145 35 chr15 49810937 49811475 -53683499 - MER21B LTR ERV1 -44 819 223 4 965 642 239 58 5 chr15 49812158 49812347 -53682627 - Lx9 LINE L1 -193 7451 7253 4 965 644 259 81 8 chr15 49812359 49812593 -53682381 + Lx9 LINE L1 7003 7253 -391 4 965 238 59 29 0 chr15 49812966 49813000 -53681974 - U2 snRNA snRNA -153 35 1 4 965 186 43 0 0 chr15 49813193 49813216 -53681758 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 965 432 0 0 0 chr15 49813320 49813368 -53681606 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 965 531 69 0 0 chr15 49813368 49813439 -53681535 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 965 262 277 59 44 chr15 49813459 49813595 -53681379 + Lx8 LINE L1 6208 6345 -1128 4 965 276 336 0 86 chr15 49813617 49813641 -53681333 + URR1B DNA MER1_type 1 23 -202 4 965 1351 77 38 6 chr15 49813641 49813824 -53681150 + B2_Mm2 SINE B2 3 191 -4 4 965 276 336 0 86 chr15 49813824 49813916 -53681058 + URR1B DNA MER1_type 24 107 -118 4 965 794 308 72 70 chr15 49814126 49814499 -53680475 + MTE2b LTR MaLR 3 376 -3 4 965 235 294 69 85 chr15 49817267 49817397 -53677577 + Lx8 LINE L1 7179 7306 -167 4 965 807 244 45 9 chr15 49817605 49817927 -53677047 + Lx4B LINE L1 6554 6997 -61 4 965 463 288 29 43 chr15 49818129 49818336 -53676638 - L1MA6 LINE L1 -445 5855 5652 4 965 429 20 0 0 chr15 49818463 49818513 -53676461 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 965 261 368 11 0 chr15 49818513 49818600 -53676374 - B3 SINE B2 -11 205 118 4 965 40 21 0 0 chr15 49818710 49818757 -53676217 + AT_rich Low_complexity Low_complexity 1 47 0 4 965 237 108 0 0 chr15 49818791 49818828 -53676146 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 965 2412 154 59 2 chr15 49819095 49819518 -53675456 + RLTR11B LTR ERVK 5 451 -2 4 965 916 262 98 50 chr15 49819592 49819930 -53675044 + RMER13A LTR ERVK 198 551 -309 4 965 413 344 95 48 chr15 49820223 49820321 -53674653 - L1_Mur3 LINE L1 -3 5877 5754 4 965 320 0 25 0 chr15 49820321 49820361 -53674613 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 965 413 344 95 48 chr15 49820361 49821010 -53673964 - L1_Mur3 LINE L1 -127 5753 5097 4 965 303 300 0 60 chr15 49821543 49821660 -53673314 - MLT2B4 LTR ERVL -45 511 402 4 965 1883 194 3 29 chr15 49821812 49822018 -53672956 + Lx4A LINE L1 6689 6894 -164 4 965 1848 132 124 23 chr15 49822018 49822366 -53672608 + RLTR9A2 LTR ERVK 1 383 0 4 965 1883 194 3 29 chr15 49822366 49822535 -53672439 + Lx4A LINE L1 6895 7054 -4 4 965 237 132 0 0 chr15 49822535 49822573 -53672401 + (ATG)n Simple_repeat Simple_repeat 2 39 0 4 965 474 304 77 17 chr15 49822655 49822889 -53672085 + Lx8 LINE L1 7074 7321 -152 4 965 546 200 154 24 chr15 49822889 49823058 -53671916 + RMER1B Other Other 861 1051 -15 4 965 236 234 141 52 chr15 49825241 49825376 -53669598 + MER5C DNA MER1_type 60 206 -107 4 965 8013 148 15 57 chr15 49825468 49827768 -53667206 + L1_Mus1 LINE L1 261 2496 -3387 4 965 7217 110 10 1 chr15 49827784 49829558 -53665416 + L1_Mus1 LINE L1 4776 6567 0 4 965 1235 250 106 31 chr15 49830464 49831025 -53663949 - RMER20B LTR ERVK -24 603 1 4 965 288 280 0 0 chr15 49831162 49831237 -53663737 + CT-rich Low_complexity Low_complexity 3 77 0 4 965 214 237 0 33 chr15 49831241 49831302 -53663672 + (TATAG)n Simple_repeat Simple_repeat 3 61 0 4 965 23 0 0 0 chr15 49831754 49831777 -53663197 + AT_rich Low_complexity Low_complexity 1 23 0 4 965 243 0 0 0 chr15 49831848 49831875 -53663099 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 965 438 20 0 0 chr15 49831875 49831925 -53663049 + (TA)n Simple_repeat Simple_repeat 2 52 0 4 965 2809 146 51 4 chr15 49833538 49834046 -53660928 - RLTR31_Mm LTR ERVK -29 532 1 4 965 202 206 29 0 chr15 49835194 49835262 -53659712 + (TA)n Simple_repeat Simple_repeat 1 70 0 4 965 304 332 62 86 chr15 49835398 49835688 -53659286 - MER67D LTR ERV1 -156 358 76 4 965 1153 232 17 10 chr15 49835688 49835980 -53658994 - Lx5 LINE L1 -1031 6019 5726 4 965 1469 194 84 9 chr15 49835980 49836303 -53658671 + MTC LTR MaLR 14 360 -61 4 965 230 295 60 60 chr15 49836346 49836429 -53658545 - MER67D LTR ERV1 -429 85 3 4 965 508 158 0 77 chr15 49836792 49836922 -53658052 - Lx3B LINE L1 -5 6968 6849 4 965 5068 98 15 4 chr15 49836948 49837685 -53657289 - Lx3B LINE L1 -518 6455 5711 4 965 404 217 12 12 chr15 49839009 49839093 -53655881 - Lx8 LINE L1 -453 7020 6937 4 965 926 166 16 39 chr15 49839259 49839441 -53655533 + B2_Mm2 SINE B2 4 181 -14 4 965 414 0 0 0 chr15 49839476 49839522 -53655452 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 4 965 5208 125 22 16 chr15 49839529 49840406 -53654568 + Lx2 LINE L1 6115 6996 -1 4 965 258 211 61 82 chr15 49840735 49840833 -53654141 + (CAGAGA)n Simple_repeat Simple_repeat 2 97 0 4 965 30 27 0 0 chr15 49841322 49841359 -53653615 + AT_rich Low_complexity Low_complexity 1 37 0 4 965 396 118 0 0 chr15 49842255 49842323 -53652651 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 965 36 53 0 0 chr15 49842586 49842643 -53652331 + AT_rich Low_complexity Low_complexity 1 57 0 4 965 23 0 0 0 chr15 49843189 49843212 -53651762 + AT_rich Low_complexity Low_complexity 1 23 0 4 965 592 243 56 11 chr15 49843318 49843497 -53651477 + MTE2b LTR MaLR 193 379 0 4 965 3982 52 2 4 chr15 49843831 49844335 -53650639 - L1Md_F2 LINE L1 -1 6581 6079 4 965 632 268 166 9 chr15 49844337 49844577 -53650397 - Lx9 LINE L1 -2 7642 7352 4 965 1009 110 0 27 chr15 49844577 49844727 -53650247 - B1_Mus2 SINE Alu 0 147 2 4 965 632 268 166 9 chr15 49844727 49844818 -53650156 - Lx9 LINE L1 -293 7351 7260 4 965 1936 49 4 0 chr15 49845098 49845345 -53649629 + MTA_Mm LTR MaLR 149 396 0 4 965 512 92 0 101 chr15 49845779 49845888 -53649086 - Lx LINE L1 -12 6642 6545 4 965 292 163 59 30 chr15 49846315 49846416 -53648558 - Lx LINE L1 0 6654 6551 4 965 22 0 0 0 chr15 49847207 49847229 -53647745 + AT_rich Low_complexity Low_complexity 1 22 0 4 965 486 352 74 43 chr15 49847329 49847878 -53647096 - L1ME3B LINE L1 -395 5845 5283 4 965 258 156 0 0 chr15 49848447 49848511 -53646463 + T-rich Low_complexity Low_complexity 1 64 0 4 965 1228 48 0 0 chr15 49848511 49848658 -53646316 - B1_Mm SINE Alu 0 147 1 4 965 25 31 0 0 chr15 49849651 49849683 -53645291 + AT_rich Low_complexity Low_complexity 1 32 0 4 965 6512 24 0 0 chr15 49849727 49850480 -53644494 + L1Md_A LINE L1 5829 6581 -1 4 965 6488 15 0 0 chr15 49850560 49851302 -53643672 + L1Md_T LINE L1 4845 5586 -297 4 965 8382 34 0 1 chr15 49851302 49852298 -53642676 + L1Md_T LINE L1 5587 6581 -1 4 965 202 226 16 0 chr15 49852398 49852460 -53642514 + CT-rich Low_complexity Low_complexity 2 64 0 4 965 1043 285 32 3 chr15 49852497 49852779 -53642195 + Lx6 LINE L1 7165 7454 -6 4 965 1371 104 25 10 chr15 49853472 49853676 -53641298 - ORR1A1 LTR MaLR 0 346 140 4 965 6497 108 69 4 chr15 49853690 49854692 -53640282 + Lx LINE L1 5587 6653 -1 4 965 35 54 0 0 chr15 49854797 49854853 -53640121 + AT_rich Low_complexity Low_complexity 1 56 0 4 965 28 29 0 0 chr15 49855108 49855143 -53639831 + AT_rich Low_complexity Low_complexity 1 35 0 4 965 1307 60 0 21 chr15 49855344 49855531 -53639443 + L1Md_F2 LINE L1 6400 6582 0 4 965 206 246 41 55 chr15 49855590 49855663 -53639311 + MIRc SINE MIR 137 208 -60 4 965 249 139 0 0 chr15 49856619 49856662 -53638312 + (CATATA)n Simple_repeat Simple_repeat 3 45 0 4 965 22 35 0 0 chr15 49857057 49857086 -53637888 + AT_rich Low_complexity Low_complexity 1 29 0 4 965 650 280 29 99 chr15 49857492 49857765 -53637209 - Lx8 LINE L1 -828 6645 6392 4 965 1539 254 97 47 chr15 49858437 49859094 -53635880 - RMER6C LTR ERVK 0 690 1 4 965 226 26 25 50 chr15 49859156 49859196 -53635778 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 965 241 279 0 0 chr15 49859252 49859313 -53635661 - Lx8 LINE L1 -239 7234 7174 4 965 376 322 53 53 chr15 49859516 49859703 -53635271 + MTE2a LTR MaLR 193 379 0 4 965 983 323 107 10 chr15 49861183 49861739 -53633235 + Lx5 LINE L1 6450 6860 -190 4 965 267 267 57 57 chr15 49861744 49861837 -53633137 + Lx6 LINE L1 7283 7382 -78 4 965 920 26 9 0 chr15 49861837 49861952 -53633022 + (CA)n Simple_repeat Simple_repeat 2 117 0 4 965 267 267 57 57 chr15 49861952 49861981 -53632993 + Lx6 LINE L1 7383 7405 -55 4 965 605 80 26 17 chr15 49861990 49862105 -53632869 + (TAGA)n Simple_repeat Simple_repeat 1 116 0 4 965 637 252 0 20 chr15 49862420 49862570 -53632404 - B1_Mur4 SINE Alu 0 150 4 4 965 1508 230 195 46 chr15 49863014 49863753 -53631221 + RMER6A LTR ERVK 1 720 0 4 965 10446 181 114 6 chr15 49863845 49865934 -53629040 + Lx2B LINE L1 3342 5673 -204 4 965 6870 65 12 1 chr15 49865934 49866817 -53628157 + RLTR13B1 LTR ERVK 1 893 0 4 965 10446 180 46 12 chr15 49866817 49868083 -53626891 + Lx2B LINE L1 5674 6999 -1 4 965 432 331 75 80 chr15 49868203 49868390 -53626584 + B3A SINE B2 6 191 -7 4 965 337 279 58 84 chr15 49869073 49869249 -53625725 - RLTR9A LTR ERVK -24 385 236 4 965 344 171 23 68 chr15 49869306 49869394 -53625580 - RLTR9A LTR ERVK -284 84 1 4 965 278 0 54 0 chr15 49869409 49869446 -53625528 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 965 1238 182 9 31 chr15 49869980 49870263 -53624711 - RMER16-int LTR ERVK -4437 969 532 5 965 386 211 51 31 chr15 49870263 49870346 -53624628 - RLTR20D LTR ERVK -16 489 404 5 965 342 0 0 0 chr15 49870346 49870384 -53624590 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 965 386 211 51 31 chr15 49870384 49870398 -53624576 - RLTR20D LTR ERVK -102 403 390 5 965 746 149 28 56 chr15 49870400 49870578 -53624396 - L1Md_F3 LINE L1 0 6584 6412 5 965 898 99 23 0 chr15 49870579 49870710 -53624264 + L1_Mus2 LINE L1 5948 6081 -485 5 965 355 145 0 0 chr15 49870713 49870775 -53624199 - RLTR20A2 LTR ERVK -94 484 423 5 965 574 274 71 67 chr15 49870760 49871020 -53623954 - RLTR20D LTR ERVK -285 283 1 5 965 2499 143 52 0 chr15 49871127 49871546 -53623428 - BGLII_B LTR ERVK 0 441 1 5 965 785 175 0 14 chr15 49871573 49871712 -53623262 - Lx9 LINE L1 -402 7242 7106 5 965 677 350 103 10 chr15 49871754 49872152 -53622822 - Lx8 LINE L1 -144 7329 6895 5 965 299 365 76 45 chr15 49872849 49873113 -53621861 - B4 SINE B4 -18 274 3 5 965 180 77 0 0 chr15 49873122 49873148 -53621826 + (CCCCCA)n Simple_repeat Simple_repeat 2 27 0 5 965 279 71 0 0 chr15 49875711 49875753 -53619221 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 965 38 61 0 0 chr15 49876854 49876920 -53618054 + AT_rich Low_complexity Low_complexity 1 66 0 5 965 1218 54 0 0 chr15 49877427 49877574 -53617400 + B1_Mm SINE Alu 1 147 0 5 965 791 349 74 3 chr15 49878099 49878424 -53616550 - LTR16C LTR ERVL -56 433 86 5 965 1020 101 22 51 chr15 49879956 49880134 -53614840 - Lx LINE L1 -6 6648 6476 5 965 243 0 0 0 chr15 49880269 49880296 -53614678 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 965 395 143 57 0 chr15 49880326 49880396 -53614578 - HAL1-3A_ME LINE L1 -809 2049 1976 5 965 386 258 165 55 chr15 49880464 49880628 -53614346 - B3A SINE B2 -16 182 1 5 965 22 0 0 0 chr15 49881612 49881634 -53613340 + AT_rich Low_complexity Low_complexity 1 22 0 5 965 21 0 0 0 chr15 49882232 49882253 -53612721 + AT_rich Low_complexity Low_complexity 1 21 0 5 965 21 0 0 0 chr15 49882517 49882538 -53612436 + AT_rich Low_complexity Low_complexity 1 21 0 5 965 313 316 98 68 chr15 49882705 49883218 -53611756 + L1M5 LINE L1 4869 5396 -750 5 965 1076 250 20 14 chr15 49883667 49883963 -53611011 + L1MC LINE L1 5497 5794 -539 5 965 7114 52 17 1 chr15 49884165 49885057 -53609917 + L1Md_F2 LINE L1 5662 6567 -15 5 965 226 203 40 13 chr15 49886741 49886816 -53608158 + L1MC2 LINE L1 6259 6335 -9 5 965 692 165 20 0 chr15 49887720 49887980 -53606994 + (TAGA)n Simple_repeat Simple_repeat 1 265 0 5 965 35005 32 14 20 chr15 49888751 49893216 -53601758 + L1Md_A LINE L1 441 4927 -956 5 965 233 183 46 77 chr15 49893216 49893281 -53601693 - RMER20A LTR ERVK -268 248 186 5 965 35005 32 14 20 chr15 49893281 49893935 -53601039 + L1Md_A LINE L1 4928 5586 -297 5 965 8336 36 1 1 chr15 49893935 49894931 -53600043 + L1Md_T LINE L1 5587 6582 0 5 965 214 325 41 33 chr15 49895742 49895863 -53599111 + MIRb SINE MIR 40 161 -107 5 965 250 295 0 0 chr15 49896087 49896148 -53598826 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 965 2581 122 61 0 chr15 49897061 49897471 -53597503 - L1_Mus4 LINE L1 -214 6422 5988 5 965 1282 142 0 5 chr15 49897471 49897691 -53597283 + L1_Mus4 LINE L1 6418 6636 0 5 965 385 345 79 37 chr15 49897844 49898147 -53596827 - Lx5 LINE L1 -15 7035 6749 5 965 360 0 0 0 chr15 49898153 49898193 -53596781 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 965 316 143 107 0 chr15 49898193 49898249 -53596725 - L1_Mus4 LINE L1 -587 6049 5988 5 965 436 86 0 0 chr15 49898250 49898308 -53596666 + Lx LINE L1 6419 6476 -178 5 965 1014 292 75 28 chr15 49898425 49898760 -53596214 - Lx5 LINE L1 -558 6902 6441 5 965 276 30 0 0 chr15 49898914 49898947 -53596027 + (TA)n Simple_repeat Simple_repeat 1 33 0 5 965 306 0 0 0 chr15 49898947 49898980 -53595994 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 965 248 130 22 0 chr15 49899198 49899244 -53595730 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 5 965 232 312 15 45 chr15 49899751 49899885 -53595089 - L1M5 LINE L1 -629 5533 5404 5 965 2834 55 0 0 chr15 49899892 49900238 -53594736 - ORR1A0 LTR MaLR 0 346 1 5 965 14596 45 0 1 chr15 49900238 49902031 -53592943 - ORR1A0-int LTR MaLR 0 1792 1 5 965 2592 58 48 0 chr15 49902031 49902361 -53592613 - ORR1A0 LTR MaLR 0 346 1 5 965 22 56 0 0 chr15 49902464 49902500 -53592474 + AT_rich Low_complexity Low_complexity 1 36 0 5 965 32915 77 6 3 chr15 49902563 49908715 -53586259 - L1Md_F2 LINE L1 -3 6579 409 5 965 397 290 25 124 chr15 49908921 49909145 -53585829 - B3A SINE B2 -2 214 1 5 965 22 0 0 0 chr15 49909585 49909607 -53585367 + AT_rich Low_complexity Low_complexity 1 22 0 5 965 291 328 39 23 chr15 49909630 49909758 -53585216 - RMER10B LTR ERVL 0 398 269 5 965 27 29 0 0 chr15 49910614 49910648 -53584326 + AT_rich Low_complexity Low_complexity 1 34 0 5 965 212 31 62 0 chr15 49910654 49910686 -53584288 + (TATAA)n Simple_repeat Simple_repeat 5 38 0 5 965 384 22 0 0 chr15 49911347 49911392 -53583582 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 5 965 1104 84 0 0 chr15 49911395 49911538 -53583436 - B1_Mus2 SINE Alu -4 143 1 5 965 319 391 54 5 chr15 49911793 49911978 -53582996 + B3A SINE B2 2 195 -3 5 965 22 35 0 0 chr15 49912564 49912593 -53582381 + AT_rich Low_complexity Low_complexity 1 29 0 5 965 221 234 0 30 chr15 49912687 49912753 -53582221 + (TA)n Simple_repeat Simple_repeat 2 65 0 5 965 343 195 0 11 chr15 49913825 49913913 -53581061 + CT-rich Low_complexity Low_complexity 2 88 0 5 965 2567 267 52 32 chr15 49915361 49915866 -53579108 - RLTR40 LTR ERVK -19 798 286 5 965 226 73 0 47 chr15 49915866 49915909 -53579065 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 965 2567 267 52 32 chr15 49915909 49916185 -53578789 - RLTR40 LTR ERVK -532 285 2 5 965 920 290 84 64 chr15 49916257 49916638 -53578336 - Lx7 LINE L1 -1135 6561 6171 5 965 1424 28 0 11 chr15 49916638 49916816 -53578158 + (CATATA)n Simple_repeat Simple_repeat 2 177 0 5 965 920 290 84 64 chr15 49916816 49916872 -53578102 - Lx7 LINE L1 -1526 6170 6115 5 965 795 215 38 12 chr15 49916873 49917090 -53577884 - Lx7 LINE L1 -1795 5901 5645 5 965 457 218 36 9 chr15 49917086 49917197 -53577777 + Lx7 LINE L1 6553 6666 -1030 5 965 867 326 9 17 chr15 49917209 49917555 -53577419 + Lx7 LINE L1 6925 7267 -429 5 965 497 131 0 0 chr15 49917583 49917667 -53577307 + Lx2A1 LINE L1 6925 7008 0 5 965 1306 313 38 45 chr15 49917672 49918120 -53576854 + Lx5 LINE L1 6594 7038 -12 5 965 207 250 0 0 chr15 49918195 49918243 -53576731 + GA-rich Low_complexity Low_complexity 3 50 0 5 965 311 111 0 0 chr15 49918246 49918291 -53576683 - MTB LTR MaLR 0 400 356 5 965 555 29 0 0 chr15 49918409 49918478 -53576496 + (TA)n Simple_repeat Simple_repeat 1 69 0 5 965 4984 139 22 15 chr15 49918505 49919461 -53575513 + L1Md_F LINE L1 208 1188 -5536 5 965 858 122 0 60 chr15 49919461 49919627 -53575347 + L1Md_F2 LINE L1 6408 6563 -19 5 965 4519 145 58 6 chr15 49919646 49919952 -53575022 + L1_Mus3 LINE L1 5037 5350 -533 5 965 558 79 0 0 chr15 49919952 49920028 -53574946 + (CA)n Simple_repeat Simple_repeat 1 76 0 5 965 6897 108 30 4 chr15 49920028 49921232 -53573742 + L1_Mus3 LINE L1 5351 6596 -42 5 965 504 312 95 43 chr15 49922733 49923293 -53571681 - L1MA4 LINE L1 -397 5903 5315 5 965 236 220 34 0 chr15 49923400 49923459 -53571515 + (CATATA)n Simple_repeat Simple_repeat 3 63 0 5 965 409 276 43 54 chr15 49923763 49923947 -53571027 - Lx9 LINE L1 -618 7026 6845 5 965 2854 204 17 28 chr15 49925333 49925909 -53569065 + RLTR20B3 LTR ERVK 5 574 -3 5 965 351 370 15 7 chr15 49926114 49926250 -53568724 + B1F SINE Alu 12 148 -1 5 965 363 23 0 0 chr15 49927357 49927401 -53567573 + (A)n Simple_repeat Simple_repeat 1 44 0 5 965 313 254 65 29 chr15 49927599 49927737 -53567237 + Lx9 LINE L1 7317 7459 -185 5 965 303 359 39 0 chr15 49928015 49928118 -53566856 + RSINE1 SINE B4 39 145 -20 5 965 450 0 0 0 chr15 49928118 49928168 -53566806 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 965 256 340 21 21 chr15 49928178 49928274 -53566700 + Tigger7 DNA MER2_type 3 98 -2393 5 965 458 256 68 32 chr15 49928526 49928716 -53566258 + Tigger7 DNA MER2_type 2261 2457 -34 5 965 1907 162 21 56 chr15 49928725 49928792 -53566182 + ORR1B2 LTR MaLR 1 58 -309 5 965 1216 41 0 0 chr15 49928792 49928937 -53566037 + B1_Mus2 SINE Alu 1 145 -2 5 965 555 56 0 0 chr15 49928938 49929009 -53565965 + (GAAAA)n Simple_repeat Simple_repeat 4 74 0 5 965 1907 162 21 56 chr15 49929009 49929317 -53565657 + ORR1B2 LTR MaLR 59 365 -2 5 965 229 222 0 18 chr15 49929346 49929401 -53565573 + (TATATG)n Simple_repeat Simple_repeat 5 58 0 5 965 787 352 120 39 chr15 49929687 49930322 -53564652 + MLT1J-int LTR MaLR 242 927 -460 5 965 429 20 0 0 chr15 49930764 49930814 -53564160 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 965 1146 268 111 23 chr15 49932210 49932554 -53562420 - ORR1D1 LTR MaLR 0 374 1 5 965 297 340 77 42 chr15 49932891 49933152 -53561822 - L2 LINE L2 -538 2881 2612 5 965 498 230 80 42 chr15 49933243 49933583 -53561391 + Lx9 LINE L1 7234 7637 -7 5 965 187 360 73 67 chr15 49933867 49934195 -53560779 - L2 LINE L2 -1545 1874 1545 5 965 240 202 0 116 chr15 49935087 49935199 -53559775 + A-rich Low_complexity Low_complexity 5 103 0 5 965 22 0 0 0 chr15 49935233 49935255 -53559719 + AT_rich Low_complexity Low_complexity 1 22 0 5 965 1615 322 43 27 chr15 49935575 49936589 -53558385 + Lx8 LINE L1 5056 6129 -1567 5 965 3863 46 35 0 chr15 49936589 49937068 -53557906 - L1Md_F2 LINE L1 -15 6567 6072 5 965 925 338 66 31 chr15 49937068 49937581 -53557393 + Lx8 LINE L1 6128 6658 -815 5 965 383 255 55 62 chr15 49937599 49937745 -53557229 - RLTR23 LTR ERV1 0 430 286 5 965 491 325 60 0 chr15 49938145 49938379 -53556595 + Lx8 LINE L1 6687 6934 -539 5 966 470 292 55 71 chr15 49938578 49938832 -53556142 + Lx8 LINE L1 7216 7465 -8 5 966 1768 195 56 8 chr15 49939071 49939444 -53555530 + ORR1B1 LTR MaLR 4 394 0 5 966 266 265 74 68 chr15 49939920 49940082 -53554892 + L1M2 LINE L1 4902 5064 -1079 5 966 1233 184 99 37 chr15 49941774 49942068 -53552906 + RLTR25B LTR ERVK 2 313 -715 5 966 348 111 0 0 chr15 49942910 49942973 -53552001 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 966 189 147 0 0 chr15 49943254 49943288 -53551686 + (GGGTG)n Simple_repeat Simple_repeat 4 37 0 5 966 386 367 60 33 chr15 49943518 49944000 -53550974 + MuRRS4-int LTR ERV1 2095 2589 -2474 5 966 2140 98 46 0 chr15 49944235 49944542 -53550432 + ORR1A2 LTR MaLR 1 321 -6 5 966 284 323 63 29 chr15 49944563 49944802 -53550172 + MuRRS4-int LTR ERV1 2484 2730 -2587 5 966 292 287 28 80 chr15 49946401 49946651 -53548323 + RMER17C LTR ERVK 80 316 -94 6 966 1699 150 38 71 chr15 49947031 49947455 -53547519 + RMER17C LTR ERVK 1 410 0 6 966 313 307 30 15 chr15 49947882 49948013 -53546961 + MMERGLN-int LTR ERV1 7092 7211 -345 6 966 313 73 18 18 chr15 49948344 49948386 -53546588 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 966 1047 106 0 32 chr15 49948386 49948571 -53546403 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 6 966 313 73 18 18 chr15 49948571 49948584 -53546390 + (TA)n Simple_repeat Simple_repeat 1 13 0 6 966 338 336 8 8 chr15 49949930 49950047 -53544927 + RMER1C Other Other 587 703 -639 6 966 224 59 29 0 chr15 49950159 49950193 -53544781 + (TA)n Simple_repeat Simple_repeat 1 35 0 6 966 2810 276 55 38 chr15 49950513 49951707 -53543267 + RMER1C Other Other 384 1339 -3 6 966 650 278 81 35 chr15 49951748 49952009 -53542965 + MER57D LTR ERV1 135 407 -4 6 966 575 246 28 7 chr15 49952429 49952572 -53542402 + B1F2 SINE Alu 1 146 -3 6 966 1029 92 0 14 chr15 49952726 49952869 -53542105 + B1_Mus1 SINE Alu 3 143 -5 6 966 303 181 0 0 chr15 49953123 49953195 -53541779 + (TA)n Simple_repeat Simple_repeat 2 73 0 6 966 327 49 0 0 chr15 49954201 49954242 -53540732 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 6 966 273 118 29 29 chr15 49955240 49955310 -53539664 + (CAAA)n Simple_repeat Simple_repeat 2 71 0 6 966 319 66 32 32 chr15 49955697 49955760 -53539214 + (CAGAGA)n Simple_repeat Simple_repeat 2 64 0 6 966 28 61 0 0 chr15 49956220 49956269 -53538705 + AT_rich Low_complexity Low_complexity 1 49 0 6 966 1566 194 27 87 chr15 49956284 49956651 -53538323 - ORR1B1 LTR MaLR -9 385 41 6 966 3850 253 37 14 chr15 49956651 49957545 -53537429 - Lx5 LINE L1 -14 7036 6123 6 966 249 150 0 0 chr15 49957544 49957584 -53537390 + L1_Mm LINE L1 5364 5403 -480 6 966 276 297 158 11 chr15 49957734 49958013 -53536961 - L1MDb LINE L1 -5331 1078 759 6 966 2199 308 66 19 chr15 49958226 49958948 -53536026 + RCHARR1 DNA MER1_type 52 815 -159 6 966 1209 243 109 3 chr15 49958948 49959286 -53535688 + ORR1D1 LTR MaLR 1 374 0 6 966 2199 308 66 19 chr15 49959286 49959443 -53535531 + RCHARR1 DNA MER1_type 816 972 -2 6 966 1232 236 113 48 chr15 49959838 49960252 -53534722 + RMER13A LTR ERVK 1 441 -419 6 966 331 375 65 71 chr15 49960285 49960609 -53534365 + RMER13A LTR ERVK 538 859 -1 6 966 35402 35 0 0 chr15 49960773 49966377 -53528597 + L1Md_T LINE L1 1 5589 -297 6 966 8990 5 0 0 chr15 49966377 49967373 -53527601 + L1Md_T LINE L1 5590 6585 0 6 966 2451 218 64 12 chr15 49969056 49969622 -53525352 + RLTR17 LTR ERVK 1 595 -97 6 966 1539 166 55 31 chr15 49969749 49970041 -53524933 - ORR1A4 LTR MaLR -12 317 19 6 966 234 123 52 17 chr15 49971173 49971231 -53523743 + (TA)n Simple_repeat Simple_repeat 2 61 0 6 966 1219 273 58 39 chr15 49971267 49971648 -53523326 - MTD LTR MaLR 0 419 32 6 966 234 0 0 0 chr15 49971654 49971680 -53523294 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 6 966 221 0 0 33 chr15 49971849 49971879 -53523095 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6 966 447 63 0 0 chr15 49973202 49973265 -53521709 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 966 581 146 0 18 chr15 49973315 49973427 -53521547 - Lx3A LINE L1 -2 6979 6870 6 966 22 56 0 0 chr15 49973663 49973699 -53521275 + AT_rich Low_complexity Low_complexity 1 36 0 6 966 286 360 74 0 chr15 49973799 49974002 -53520972 + L1M2 LINE L1 4851 5068 -1075 6 966 28 48 0 0 chr15 49974255 49974297 -53520677 + AT_rich Low_complexity Low_complexity 1 42 0 6 966 9009 189 87 56 chr15 49975280 49978237 -53516737 - RMER16-int LTR ERVK -1195 6211 938 6 966 2878 59 0 3 chr15 49978237 49978595 -53516379 - IAPEY2_LTR LTR ERVK 0 357 1 6 966 4965 184 118 40 chr15 49978595 49979164 -53515810 - RMER16-int LTR ERVK -4469 937 263 6 966 693 45 0 0 chr15 49979164 49979253 -53515721 + (TC)n Simple_repeat Simple_repeat 2 90 0 6 966 961 244 20 84 chr15 49979687 49980080 -53514894 - RLTR9A LTR ERVK 0 368 1 6 966 21 0 0 0 chr15 49980108 49980129 -53514845 + AT_rich Low_complexity Low_complexity 1 21 0 6 966 204 211 0 0 chr15 49980129 49980167 -53514807 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 966 285 51 0 0 chr15 49980177 49980216 -53514758 + (T)n Simple_repeat Simple_repeat 1 39 0 6 966 261 0 0 0 chr15 49982641 49982670 -53512304 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 966 28 71 0 0 chr15 49982695 49982751 -53512223 + AT_rich Low_complexity Low_complexity 1 56 0 6 966 2611 152 7 9 chr15 49982843 49983274 -53511700 + Lx2 LINE L1 6300 6729 -268 6 966 3129 167 22 76 chr15 49983274 49983781 -53511193 - RMER17A LTR ERVK 0 751 283 6 966 2819 41 2 122 chr15 49983781 49984222 -53510752 - RLTR10 LTR ERVK -2 388 1 6 966 3129 167 22 76 chr15 49984222 49984486 -53510488 - RMER17A LTR ERVK -469 282 22 6 966 1322 155 66 11 chr15 49984498 49984772 -53510202 + Lx2A1 LINE L1 6719 7007 -1 6 966 433 307 119 27 chr15 49985273 49986221 -53508753 - L1MC1 LINE L1 -138 6206 5163 6 966 427 319 98 67 chr15 49986289 49986676 -53508298 - L1MD LINE L1 -1098 5048 4650 6 966 443 114 0 25 chr15 49987151 49987232 -53507742 + (CATA)n Simple_repeat Simple_repeat 4 82 0 6 966 24 0 0 0 chr15 49988397 49988421 -53506553 + AT_rich Low_complexity Low_complexity 1 24 0 6 966 236 313 48 0 chr15 49988742 49988825 -53506149 + ID_B1 SINE B4 109 195 -29 6 966 3746 206 164 7 chr15 49989167 49990062 -53504912 - Lx4A LINE L1 -1 7057 5938 6 966 2805 175 9 6 chr15 49990214 49990749 -53504225 - L1_Mm LINE L1 -1051 4832 4296 6 966 2115 137 0 0 chr15 49990740 49991062 -53503912 + L1_Mus4 LINE L1 6133 6454 -182 6 966 31590 87 13 4 chr15 49991057 49995797 -53499177 + L1Md_F2 LINE L1 909 5683 -200 6 966 1426 62 99 9 chr15 49995808 49996019 -53498955 - L1Md_F3 LINE L1 -3 6581 6352 6 966 5263 97 116 4 chr15 49996019 49996824 -53498150 + L1Md_F2 LINE L1 5687 6581 -1 6 966 504 32 0 0 chr15 49997644 49997706 -53497268 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 966 270 0 0 0 chr15 49997856 49997886 -53497088 + (A)n Simple_repeat Simple_repeat 1 30 0 6 966 687 256 35 5 chr15 49997955 49998155 -53496819 + Lx9 LINE L1 7302 7507 -137 6 966 333 117 0 0 chr15 49998878 49998938 -53496036 + (TGGA)n Simple_repeat Simple_repeat 2 61 0 6 966 23 0 0 0 chr15 49999458 49999481 -53495493 + AT_rich Low_complexity Low_complexity 1 23 0 6 966 22 0 0 0 chr15 49999507 49999529 -53495445 + AT_rich Low_complexity Low_complexity 1 22 0 6 966 271 410 56 6 chr15 50000824 50001003 -53493971 + MER5A DNA MER1_type 1 188 -1 1 966 27 29 0 0 chr15 50001671 50001705 -53493269 + AT_rich Low_complexity Low_complexity 1 34 0 2 966 450 88 0 0 chr15 50003443 50003511 -53491463 + (TG)n Simple_repeat Simple_repeat 2 69 0 3 966 435 308 80 10 chr15 50004011 50004211 -53490763 - RMER5 LTR ERV1 -296 238 25 4 966 288 0 0 0 chr15 50004380 50004412 -53490562 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 5 966 334 302 58 53 chr15 50004746 50005066 -53489908 + L1MD LINE L1 5281 5611 -631 6 966 213 39 0 0 chr15 50005224 50005250 -53489724 + (GA)n Simple_repeat Simple_repeat 1 26 0 7 966 1173 126 188 14 chr15 50005399 50005617 -53489357 + Lx3A LINE L1 6710 6965 -16 8 966 186 43 0 0 chr15 50005620 50005643 -53489331 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 966 240 149 0 0 chr15 50005956 50006003 -53488971 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 1 966 708 101 23 0 chr15 50006047 50006176 -53488798 + (TCTA)n Simple_repeat Simple_repeat 2 133 0 1 966 2528 169 49 2 chr15 50006296 50006331 -53488643 - RLTR20A1 LTR ERVK -58 493 459 1 966 480 18 0 0 chr15 50006331 50006388 -53488586 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 966 486 0 0 0 chr15 50006389 50006443 -53488531 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 966 2528 169 49 2 chr15 50006443 50006856 -53488118 - RLTR20A1 LTR ERVK -93 458 28 1 966 22 0 0 0 chr15 50007155 50007177 -53487797 + AT_rich Low_complexity Low_complexity 1 22 0 1 966 245 324 75 47 chr15 50007227 50007334 -53487640 - RMER1A Other Other -743 287 178 1 966 2110 181 196 30 chr15 50007304 50007799 -53487175 + RMER1B Other Other 479 1055 -11 1 966 1856 290 140 20 chr15 50007811 50008278 -53486696 - Lx6 LINE L1 -177 7283 6746 1 966 215 61 30 0 chr15 50008278 50008311 -53486663 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 1 966 1856 290 140 20 chr15 50008311 50008494 -53486480 - Lx6 LINE L1 -715 6745 6555 1 966 21 0 0 0 chr15 50008504 50008525 -53486449 + AT_rich Low_complexity Low_complexity 1 21 0 2 966 1770 148 128 0 chr15 50010020 50010347 -53484627 - Lx4B LINE L1 -1101 5957 5589 2 966 5508 184 47 6 chr15 50010348 50011393 -53483581 + Lx4B LINE L1 5951 7038 -20 2 966 315 0 0 0 chr15 50011393 50011428 -53483546 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 2 966 20034 164 16 77 chr15 50011810 50014672 -53480302 + Lx3A LINE L1 3 2741 -3145 2 966 603 170 38 0 chr15 50014672 50014778 -53480196 + BGLII_A LTR ERVK 1 110 -335 2 966 1320 166 0 5 chr15 50014770 50014976 -53479998 + RLTR17 LTR ERVK 362 566 -126 2 966 229 226 0 184 chr15 50014957 50015071 -53479903 + RLTR31_Mm LTR ERVK 469 561 0 2 966 20034 164 16 77 chr15 50015071 50017436 -53477538 + Lx3A LINE L1 2742 5006 -880 2 966 995 117 0 0 chr15 50017436 50017573 -53477401 + B1_Mus2 SINE Alu 2 138 -9 2 966 189 0 0 0 chr15 50017573 50017594 -53477380 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2 966 20034 112 15 41 chr15 50017594 50018788 -53476186 + Lx3A LINE L1 5007 6148 -833 2 966 913 104 82 0 chr15 50018788 50018923 -53476051 + B1_Mm SINE Alu 1 146 -1 2 966 762 169 18 0 chr15 50018929 50019095 -53475879 + GA-rich Low_complexity Low_complexity 2 170 0 3 966 348 193 0 0 chr15 50019102 50019159 -53475815 + Lx3B LINE L1 6236 6292 -681 3 966 2240 118 6 11 chr15 50019159 50019519 -53475455 + Lx3A LINE L1 6622 6979 -2 2 966 318 272 0 28 chr15 50019700 50019806 -53475168 + (CATA)n Simple_repeat Simple_repeat 4 106 0 3 966 552 53 0 0 chr15 50019856 50019932 -53475042 + (CA)n Simple_repeat Simple_repeat 1 76 0 3 966 303 85 0 0 chr15 50019932 50019979 -53474995 + (GA)n Simple_repeat Simple_repeat 1 47 0 3 966 277 356 74 24 chr15 50019979 50020316 -53474658 + L1MD3 LINE L1 6613 6966 -1029 3 966 214 143 41 0 chr15 50020429 50020478 -53474496 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 966 353 346 33 14 chr15 50020622 50020836 -53474138 + L1MD3 LINE L1 7590 7807 -188 3 966 225 0 0 0 chr15 50021115 50021140 -53473834 + (A)n Simple_repeat Simple_repeat 1 25 0 3 966 271 306 42 0 chr15 50021616 50021688 -53473286 - RLTR20A1 LTR ERVK 0 551 477 3 966 4276 189 41 12 chr15 50021826 50022626 -53472348 + RMER13A LTR ERVK 1 823 -37 3 966 2084 186 20 17 chr15 50023256 50023662 -53471312 - MTB_Mm LTR MaLR 0 407 1 4 966 1295 190 36 4 chr15 50024172 50024421 -53470553 + RMER20B LTR ERVK 328 584 -43 4 966 802 267 33 19 chr15 50024437 50024647 -53470327 - MTE2a LTR MaLR -162 217 5 4 966 2031 124 41 0 chr15 50025137 50025451 -53469523 - ORR1A2 LTR MaLR 0 327 1 4 966 22 35 0 0 chr15 50025973 50026002 -53468972 + AT_rich Low_complexity Low_complexity 1 29 0 4 966 225 0 0 0 chr15 50026117 50026142 -53468832 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 966 522 318 37 18 chr15 50026346 50026564 -53468410 + RMER15 LTR ERVL 340 561 -14 4 966 1002 173 0 6 chr15 50026674 50026848 -53468126 + RMER6D LTR ERVK 1 173 -547 4 966 5191 87 35 12 chr15 50026852 50027838 -53467136 + L1VL2 LINE L1 764 1820 -1795 4 966 370 270 0 0 chr15 50027983 50028072 -53466902 - PB1D10 SINE Alu -2 115 27 4 966 28 71 0 0 chr15 50028778 50028834 -53466140 + AT_rich Low_complexity Low_complexity 1 56 0 5 966 21 36 0 0 chr15 50029209 50029237 -53465737 + AT_rich Low_complexity Low_complexity 1 28 0 5 966 6431 138 37 8 chr15 50029411 50030487 -53464487 - Lx2 LINE L1 0 6997 5891 5 966 1197 227 76 71 chr15 50032942 50033322 -53461652 - ORR1C2 LTR MaLR 0 384 3 5 966 795 318 121 3 chr15 50033322 50033655 -53461319 - MTD LTR MaLR -36 383 11 5 966 3552 132 59 0 chr15 50033884 50034444 -53460530 + L1Md_F LINE L1 396 988 -5628 5 966 23743 88 14 3 chr15 50034441 50037824 -53457150 + L1Md_F LINE L1 1684 5103 -780 5 966 2747 88 27 10 chr15 50037847 50038248 -53456726 + L1Md_F2 LINE L1 6173 6580 -2 5 966 239 296 4 11 chr15 50038348 50038468 -53456506 - L1MB1 LINE L1 -209 5959 5840 5 966 4760 38 17 0 chr15 50038470 50039044 -53455930 + L1Md_T LINE L1 5987 6570 -12 5 966 954 0 0 0 chr15 50039754 50039860 -53455114 + (TCTCC)n Simple_repeat Simple_repeat 1 106 0 5 966 244 322 102 75 chr15 50040079 50040441 -53454533 - L1MB1 LINE L1 -468 5700 5329 5 966 1108 269 65 32 chr15 50040459 50040955 -53454019 - L1MB1 LINE L1 -872 5268 4757 5 966 279 0 0 0 chr15 50041197 50041228 -53453746 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 966 237 296 25 0 chr15 50041259 50041340 -53453634 + GA-rich Low_complexity Low_complexity 2 84 0 6 966 23 0 0 0 chr15 50041343 50041366 -53453608 + AT_rich Low_complexity Low_complexity 1 23 0 6 966 22 35 0 0 chr15 50041426 50041455 -53453519 + AT_rich Low_complexity Low_complexity 1 29 0 6 966 471 342 13 0 chr15 50041509 50041661 -53453313 + B3A SINE B2 1 154 -44 6 966 288 53 0 0 chr15 50041677 50041715 -53453259 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 966 198 125 0 111 chr15 50043270 50043315 -53451659 - MER5A DNA MER1_type -99 90 51 6 966 189 0 0 0 chr15 50044102 50044123 -53450851 + (TGG)n Simple_repeat Simple_repeat 1 21 0 6 966 202 106 21 21 chr15 50044126 50044174 -53450800 + (TTTTTG)n Simple_repeat Simple_repeat 1 48 0 6 966 831 128 0 0 chr15 50044176 50044301 -53450673 - B1_Mm SINE Alu 0 147 23 6 966 2800 85 53 7 chr15 50044301 50044717 -53450257 + L1_Mus2 LINE L1 6132 6566 0 7 966 27 62 0 0 chr15 50045106 50045154 -53449820 + AT_rich Low_complexity Low_complexity 1 48 0 7 966 340 357 16 8 chr15 50045342 50045588 -53449386 - Lx9 LINE L1 -172 7472 7225 7 966 26 30 0 0 chr15 50045834 50045867 -53449107 + AT_rich Low_complexity Low_complexity 1 33 0 7 966 592 329 83 61 chr15 50045867 50046229 -53448745 + ORR1D2 LTR MaLR 1 370 0 7 966 36 70 0 0 chr15 50046691 50046762 -53448212 + AT_rich Low_complexity Low_complexity 1 71 0 7 966 24 67 0 0 chr15 50047008 50047053 -53447921 + AT_rich Low_complexity Low_complexity 1 45 0 7 966 387 0 0 0 chr15 50048035 50048078 -53446896 + (CTCA)n Simple_repeat Simple_repeat 4 46 0 7 966 256 262 28 9 chr15 50048482 50048590 -53446384 - L1M3 LINE L1 -1132 5008 4899 7 966 522 295 46 26 chr15 50048621 50048816 -53446158 + L1M3 LINE L1 5524 5722 -446 7 966 378 318 9 18 chr15 50048855 50048967 -53446007 + B3 SINE B2 72 182 -34 8 966 313 359 115 55 chr15 50051272 50051490 -53443484 - Tigger5 DNA MER2_type -2137 269 39 8 966 228 171 26 79 chr15 50052705 50052819 -53442155 + (TAGA)n Simple_repeat Simple_repeat 4 111 0 8 966 192 163 0 0 chr15 50052819 50052862 -53442112 + (CATA)n Simple_repeat Simple_repeat 2 44 0 8 966 839 299 101 31 chr15 50054785 50055171 -53439803 - Lx8 LINE L1 -221 7252 6840 8 966 394 212 12 0 chr15 50055377 50055537 -53439437 + (TG)n Simple_repeat Simple_repeat 2 163 0 8 966 242 253 0 0 chr15 50055548 50055623 -53439351 + (TG)n Simple_repeat Simple_repeat 2 76 0 8 966 358 375 66 0 chr15 50055624 50055760 -53439214 - RSINE1 SINE B4 0 165 21 8 966 24 67 0 0 chr15 50056078 50056123 -53438851 + AT_rich Low_complexity Low_complexity 1 45 0 8 966 2443 87 6 0 chr15 50056123 50056444 -53438530 + ORR1A2 LTR MaLR 5 327 0 8 966 758 344 91 40 chr15 50056958 50057409 -53437565 - MER82 DNA MER2_type -179 474 1 8 966 899 284 31 59 chr15 50057828 50058184 -53436790 + Lx6 LINE L1 5923 6268 -1192 9 966 737 254 109 5 chr15 50058217 50058427 -53436547 + Lx6 LINE L1 6777 7008 -452 9 966 3436 59 2 7 chr15 50058728 50059169 -53435805 - L1Md_F2 LINE L1 -12 6570 6132 9 966 31 26 0 0 chr15 50059975 50060013 -53434961 + AT_rich Low_complexity Low_complexity 1 38 0 9 966 8311 34 1 0 chr15 50061272 50062386 -53432588 - L1Md_F2 LINE L1 0 6582 5467 9 966 1929 205 61 15 chr15 50062688 50063079 -53431895 + MTC LTR MaLR 13 421 0 9 966 425 401 7 0 chr15 50063201 50063353 -53431621 + RSINE1 SINE B4 7 159 -6 9 966 483 94 21 10 chr15 50063353 50063450 -53431524 + (GA)n Simple_repeat Simple_repeat 2 99 0 9 966 510 90 0 13 chr15 50064021 50064094 -53430880 - L1_Rod LINE L1 -2387 3460 3388 9 966 1244 84 0 6 chr15 50064094 50064274 -53430700 + (GAAAA)n Simple_repeat Simple_repeat 2 180 0 9 966 762 300 30 30 chr15 50064310 50064540 -53430434 + MTE2b LTR MaLR 142 371 -8 9 966 1137 94 6 0 chr15 50065102 50065261 -53429713 + B2_Mm1t SINE B2 1 160 -33 1 966 396 0 0 0 chr15 50065261 50065305 -53429669 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 1 966 348 312 49 49 chr15 50066439 50066624 -53428350 - L1M4 LINE L1 -744 5402 5218 1 966 1093 57 7 0 chr15 50066624 50066765 -53428209 + B1_Mus2 SINE Alu 1 142 -5 1 966 3993 148 6 27 chr15 50066823 50067533 -53427441 - Lx2 LINE L1 0 6997 6303 1 966 229 309 78 5 chr15 50067703 50067895 -53427079 - L1M4 LINE L1 -1247 4899 4694 1 966 233 29 29 0 chr15 50067986 50068020 -53426954 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 966 261 240 53 76 chr15 50068606 50068737 -53426237 - L1M4 LINE L1 -1479 4661 4534 1 966 307 364 8 0 chr15 50068781 50068902 -53426072 - L1M4 LINE L1 -1745 4401 4280 1 966 391 385 18 0 chr15 50069281 50069450 -53425524 + B3A SINE B2 25 196 -2 1 966 24 0 0 0 chr15 50069455 50069479 -53425495 + AT_rich Low_complexity Low_complexity 1 24 0 1 967 6516 189 30 11 chr15 50069520 50070928 -53424046 - Lx3C LINE L1 -2 6974 5534 1 967 2349 147 51 8 chr15 50070928 50071319 -53423655 + RLTR26 LTR ERVK 1 408 -234 1 967 712 152 0 0 chr15 50071356 50071468 -53423506 + RLTR26 LTR ERVK 531 642 0 1 967 8275 168 21 8 chr15 50071469 50072494 -53422480 - Lx3C LINE L1 -1013 4864 3842 1 967 447 19 0 0 chr15 50072494 50072546 -53422428 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 967 8275 168 21 8 chr15 50072546 50073101 -53421873 - Lx3C LINE L1 -2036 3841 3263 1 967 3353 168 13 3 chr15 50073107 50073741 -53421233 - Lx3C LINE L1 -3265 2621 1982 1 967 647 156 0 0 chr15 50073859 50073968 -53421006 - L1Md_F LINE L1 -5974 545 437 1 967 276 246 0 0 chr15 50073957 50074018 -53420956 - L1Md_F LINE L1 -6386 133 73 1 967 15033 78 9 1 chr15 50074013 50076044 -53418930 + L1Md_F2 LINE L1 3538 5585 -298 1 967 6325 59 136 2 chr15 50076045 50076967 -53418007 + L1Md_F2 LINE L1 5587 6582 0 1 967 3531 84 29 6 chr15 50076967 50077459 -53417515 + L1Md_F2 LINE L1 6080 6582 0 1 967 472 138 34 8 chr15 50079110 50079227 -53415747 + (CA)n Simple_repeat Simple_repeat 2 121 0 1 967 21 0 0 0 chr15 50079601 50079622 -53415352 + AT_rich Low_complexity Low_complexity 1 21 0 1 967 1062 33 51 39 chr15 50080414 50080570 -53414404 - L1Md_F3 LINE L1 0 6584 6427 1 967 6174 57 18 0 chr15 50080570 50081357 -53413617 + L1_Mm LINE L1 4537 5337 -546 1 967 723 89 128 16 chr15 50081933 50082058 -53412916 - L1Md_F2 LINE L1 -10 6572 6434 1 967 191 319 41 41 chr15 50082162 50082260 -53412714 + L2 LINE L2 2793 2890 -529 1 967 305 191 70 21 chr15 50082736 50082923 -53412051 + RMER17D LTR ERVK 320 515 -374 1 967 771 309 9 0 chr15 50083205 50083428 -53411546 + Lx9 LINE L1 6654 6878 -766 1 967 240 259 0 0 chr15 50083645 50083726 -53411248 + (CA)n Simple_repeat Simple_repeat 2 82 0 1 967 245 346 109 19 chr15 50084368 50084524 -53410450 - MIR3 SINE MIR -3 205 36 1 967 192 220 0 0 chr15 50085091 50085109 -53409865 + (TAA)n Simple_repeat Simple_repeat 2 19 0 1 967 3418 18 8 0 chr15 50085109 50085502 -53409472 + MTA_Mm LTR MaLR 1 396 0 1 967 192 220 0 0 chr15 50085502 50085542 -53409432 + (TAA)n Simple_repeat Simple_repeat 2 41 0 1 967 314 281 138 138 chr15 50087134 50087596 -53407378 + ERVL-B4-int LTR ERVL 4369 4830 -927 1 967 1433 210 70 45 chr15 50087599 50087973 -53407001 - ORR1C2 LTR MaLR -1 383 1 1 967 609 275 134 51 chr15 50088076 50088329 -53406645 + ERVL-B4-int LTR ERVL 4845 5118 -596 1 967 447 221 125 0 chr15 50088484 50088588 -53406386 - URR1B DNA MER1_type -1 224 108 1 967 193 125 0 99 chr15 50088588 50088659 -53406315 + T-rich Low_complexity Low_complexity 1 64 0 1 967 1253 40 0 0 chr15 50088661 50088809 -53406165 - B1_Mus1 SINE Alu 0 148 1 1 967 489 277 0 8 chr15 50088809 50088929 -53406045 - URR1B DNA MER1_type -106 119 1 1 967 396 278 10 225 chr15 50088980 50089189 -53405785 + MTD LTR MaLR 3 166 -253 1 967 311 218 10 0 chr15 50089202 50089303 -53405671 + GA-rich Low_complexity Low_complexity 1 102 0 1 967 747 239 24 44 chr15 50089308 50089514 -53405460 + MTD LTR MaLR 204 405 -14 1 967 544 319 47 33 chr15 50090513 50090724 -53404250 + MLT1E LTR MaLR 1 214 -439 1 967 349 364 79 0 chr15 50090723 50090888 -53404086 + MLT1E LTR MaLR 368 545 -109 1 967 345 302 149 11 chr15 50091786 50091967 -53403007 - MER3 DNA MER1_type -3 206 1 1 967 2148 56 7 14 chr15 50092115 50092407 -53402567 + L1_Mus2 LINE L1 6277 6566 0 1 967 291 260 200 16 chr15 50093657 50093782 -53401192 + B1F1 SINE Alu 1 148 -1 1 967 186 43 0 0 chr15 50093795 50093818 -53401156 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 967 794 177 6 0 chr15 50093868 50094026 -53400948 + GA-rich Low_complexity Low_complexity 2 160 0 1 967 439 116 2 10 chr15 50094111 50094195 -53400779 - Lx LINE L1 -229 6337 6257 1 967 1579 113 59 17 chr15 50094199 50094486 -53400488 + Lx LINE L1 6352 6650 -4 1 967 789 241 34 13 chr15 50094698 50094937 -53400037 - RCHARR1 DNA MER1_type -22 952 709 1 967 1174 213 34 0 chr15 50095054 50095317 -53399657 - RCHARR1 DNA MER1_type -267 707 436 1 967 531 0 0 0 chr15 50095476 50095535 -53399439 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 967 29 0 0 0 chr15 50095920 50095949 -53399025 + AT_rich Low_complexity Low_complexity 1 29 0 1 967 29 28 0 0 chr15 50096029 50096065 -53398909 + AT_rich Low_complexity Low_complexity 1 36 0 1 967 25 0 0 0 chr15 50097003 50097028 -53397946 + AT_rich Low_complexity Low_complexity 1 25 0 1 967 558 75 0 0 chr15 50099904 50099984 -53394990 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 967 21 0 0 0 chr15 50100030 50100051 -53394923 + AT_rich Low_complexity Low_complexity 1 21 0 1 967 367 361 74 80 chr15 50100197 50100549 -53394425 - MLT2D LTR ERVL -61 353 4 1 967 414 328 0 0 chr15 50100572 50100700 -53394274 - Lx9 LINE L1 -276 7368 7241 1 967 304 253 46 0 chr15 50100726 50100813 -53394161 - Lx9 LINE L1 -594 7050 6960 1 967 1292 292 32 73 chr15 50100807 50101282 -53393692 - Lx9 LINE L1 -1717 5927 5457 1 967 378 0 0 0 chr15 50101282 50101324 -53393650 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 967 1292 270 30 40 chr15 50101324 50101445 -53393529 - Lx9 LINE L1 -391 5456 5329 1 967 283 263 0 0 chr15 50101445 50101521 -53393453 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 967 1125 247 107 58 chr15 50101543 50101813 -53393161 + Lx9 LINE L1 6986 7246 -398 1 967 330 26 0 0 chr15 50101813 50101852 -53393122 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 1 967 1125 247 107 58 chr15 50101852 50102149 -53392825 + Lx9 LINE L1 7247 7581 -63 1 967 230 315 78 68 chr15 50102165 50102356 -53392618 + MLT1D LTR MaLR 104 296 -209 1 967 191 61 30 0 chr15 50102819 50102852 -53392122 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 1 967 391 234 43 22 chr15 50103179 50103343 -53391631 - Lx2B LINE L1 -23 6977 6768 1 967 6198 63 2 1 chr15 50103550 50104343 -53390631 - L1_Mus1 LINE L1 0 6567 5774 1 967 316 333 13 25 chr15 50104375 50104532 -53390442 - RSINE1 SINE B4 -8 157 3 1 967 478 328 21 16 chr15 50104918 50105110 -53389864 + MTEa LTR MaLR 184 376 -3 1 967 4814 43 5 0 chr15 50105222 50105805 -53389169 - L1Md_F2 LINE L1 -2 6580 5995 1 967 1366 89 116 5 chr15 50105878 50106093 -53388881 - L1_Mus3 LINE L1 -7 6631 6393 1 967 1541 68 5 0 chr15 50106095 50106300 -53388674 + L1_Mus3 LINE L1 6200 6405 -233 1 967 385 372 52 16 chr15 50106319 50106510 -53388464 - B3 SINE B2 -2 214 17 1 967 385 314 69 0 chr15 50106782 50106941 -53388033 - B3 SINE B2 0 216 47 1 967 480 310 69 83 chr15 50106999 50107551 -53387423 - L1MC1 LINE L1 -35 6298 5755 1 967 2716 196 82 48 chr15 50107553 50108701 -53386273 - L1_Mur3 LINE L1 -3829 2051 859 1 967 467 309 22 27 chr15 50108695 50108878 -53386096 - L1_Mur3 LINE L1 -7167 561 380 1 967 1066 260 67 48 chr15 50108886 50109258 -53385716 - Lx7 LINE L1 -249 7447 7069 1 967 4506 243 46 12 chr15 50109254 50109868 -53385106 - Lx7 LINE L1 -935 6761 6129 1 967 3381 33 2 5 chr15 50109868 50110265 -53384709 - MTA_Mm LTR MaLR 0 396 1 1 967 4506 223 33 9 chr15 50110265 50111190 -53383784 - Lx7 LINE L1 -1568 6128 5179 1 967 267 226 16 0 chr15 50111484 50111546 -53383428 - MIR SINE MIR -5 257 195 1 967 219 324 125 36 chr15 50112419 50112531 -53382443 - B1F SINE Alu -23 126 5 1 967 483 200 112 51 chr15 50112793 50113010 -53381964 - L1MA4 LINE L1 -4 6296 6068 1 967 652 329 90 21 chr15 50113030 50113319 -53381655 + RCHARR1 DNA MER1_type 35 343 -631 1 967 212 393 0 9 chr15 50113360 50113473 -53381501 + PB1D10 SINE Alu 1 112 -5 1 967 23 78 0 0 chr15 50116287 50116338 -53378636 + AT_rich Low_complexity Low_complexity 1 51 0 1 967 276 338 12 24 chr15 50116338 50116420 -53378554 - ID4_ SINE ID -2 81 1 1 967 2376 231 29 34 chr15 50116424 50116984 -53377990 + RLTR20B3 LTR ERVK 21 577 0 1 967 24 32 0 0 chr15 50117115 50117146 -53377828 + AT_rich Low_complexity Low_complexity 1 31 0 1 967 400 115 16 0 chr15 50119381 50119442 -53375532 + URR1B DNA MER1_type 164 225 0 1 967 237 388 28 61 chr15 50120327 50120541 -53374433 - MIR SINE MIR -50 212 6 1 967 517 287 69 0 chr15 50120848 50121022 -53373952 + MER5A DNA MER1_type 2 187 -2 1 967 253 295 36 71 chr15 50121647 50121731 -53373243 + ORR1E LTR MaLR 21 101 -258 1 967 1404 117 42 0 chr15 50121732 50121945 -53373029 + L1_Mus1 LINE L1 6344 6565 -2 1 967 225 0 0 0 chr15 50122940 50122965 -53372009 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 1 967 198 0 0 0 chr15 50122979 50123001 -53371973 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 967 189 0 0 0 chr15 50123309 50123330 -53371644 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 967 1502 178 0 4 chr15 50123963 50124228 -53370746 - Lx2 LINE L1 -1 6996 6733 1 967 418 311 19 90 chr15 50124285 50124497 -53370477 + MT2A LTR ERVL 177 373 -160 1 967 21 36 0 0 chr15 50124762 50124790 -53370184 + AT_rich Low_complexity Low_complexity 1 28 0 1 967 508 279 89 24 chr15 50124902 50125115 -53369859 - Lx6 LINE L1 -8 7452 7226 1 967 211 227 25 175 chr15 50125206 50125286 -53369688 + PB1 SINE Alu 44 111 -16 1 967 258 327 0 29 chr15 50125316 50125420 -53369554 + GA-rich Low_complexity Low_complexity 5 105 0 1 967 231 36 0 0 chr15 50128731 50128759 -53366215 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 967 267 242 49 21 chr15 50130225 50130329 -53364645 - ORR1D2 LTR MaLR 0 379 271 1 967 684 300 51 86 chr15 50130430 50130722 -53364252 + MTD LTR MaLR 83 364 -55 1 967 589 303 76 71 chr15 50132225 50132463 -53362511 + B4A SINE B4 2 240 -52 1 967 279 0 0 0 chr15 50132463 50132494 -53362480 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 967 204 380 37 37 chr15 50132892 50133026 -53361948 - MIRb SINE MIR -111 157 24 1 967 485 396 58 11 chr15 50133411 50133689 -53361285 - B4A SINE B4 -1 291 1 1 967 229 214 54 0 chr15 50134067 50134123 -53360851 - U5 snRNA snRNA -57 59 1 1 967 213 121 0 0 chr15 50134984 50135017 -53359957 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 1 967 186 133 0 0 chr15 50135121 50135151 -53359823 + (GA)n Simple_repeat Simple_repeat 1 30 0 2 967 586 239 72 47 chr15 50135395 50135588 -53359386 - B3A SINE B2 0 198 1 2 967 351 0 0 0 chr15 50136716 50136755 -53358219 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 967 236 311 90 30 chr15 50137455 50137621 -53357353 - L1M2 LINE L1 -573 5718 5543 2 967 474 18 0 0 chr15 50137687 50137742 -53357232 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 967 747 118 0 0 chr15 50137742 50137886 -53357088 + (GA)n Simple_repeat Simple_repeat 1 144 0 2 967 245 305 83 21 chr15 50138136 50138280 -53356694 + Charlie5 DNA MER1_type 41 193 -2431 2 967 277 308 37 37 chr15 50138371 50138479 -53356495 - ID_B1 SINE B4 -4 220 113 2 967 215 375 0 14 chr15 50139609 50139682 -53355292 + ID2 SINE ID 2 73 -10 2 967 261 0 0 0 chr15 50139682 50139711 -53355263 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 2 967 1031 129 0 6 chr15 50139713 50139892 -53355082 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 2 967 2876 226 15 19 chr15 50141259 50141842 -53353132 + Lx5 LINE L1 6470 7050 0 2 967 23 0 0 0 chr15 50142683 50142706 -53352268 + AT_rich Low_complexity Low_complexity 1 23 0 2 967 549 229 0 0 chr15 50144486 50144604 -53350370 + Lx9 LINE L1 6846 6963 -681 2 967 32 26 0 0 chr15 50144739 50144778 -53350196 + AT_rich Low_complexity Low_complexity 1 39 0 2 967 1831 184 92 13 chr15 50147102 50147481 -53347493 - MTC LTR MaLR -12 409 1 2 967 537 136 0 0 chr15 50148035 50148116 -53346858 + MusHAL1 LINE L1 7 87 -3267 2 967 2793 176 37 68 chr15 50148109 50148521 -53346453 + L1_Mm LINE L1 4865 5297 -586 2 967 1108 62 14 0 chr15 50148521 50148667 -53346307 + B1_Mus1 SINE Alu 1 148 0 2 967 2793 176 37 68 chr15 50148667 50148902 -53346072 + L1_Mm LINE L1 5298 5492 -391 2 967 3105 156 27 6 chr15 50148902 50149413 -53345561 + RLTR17 LTR ERVK 1 522 -170 2 967 4670 124 31 12 chr15 50149413 50150156 -53344818 + Lx LINE L1 5883 6639 -15 2 967 714 284 5 10 chr15 50150178 50150377 -53344597 - B3 SINE B2 -16 200 3 2 967 217 104 0 77 chr15 50150511 50150563 -53344411 + A-rich Low_complexity Low_complexity 5 52 0 2 967 4118 111 15 43 chr15 50151018 50151695 -53343279 - Lx2 LINE L1 0 6997 6340 2 967 1543 63 0 14 chr15 50151697 50151907 -53343067 - L1_Mus2 LINE L1 0 6566 6360 2 967 1741 123 14 18 chr15 50151907 50152188 -53342786 - Lx2 LINE L1 -653 6344 6065 2 967 351 0 0 0 chr15 50152232 50152271 -53342703 + (T)n Simple_repeat Simple_repeat 1 39 0 2 967 331 288 66 33 chr15 50152545 50152723 -53342251 - MIR SINE MIR -50 218 25 2 967 432 0 0 0 chr15 50153164 50153212 -53341762 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 967 459 0 0 0 chr15 50153214 50153265 -53341709 + (GA)n Simple_repeat Simple_repeat 1 51 0 2 967 1149 62 7 0 chr15 50153468 50153613 -53341361 + B1_Mus1 SINE Alu 2 147 -1 2 967 1916 180 27 12 chr15 50153711 50154043 -53340931 - ORR1B1 LTR MaLR -8 386 50 2 967 211 385 71 51 chr15 50154043 50154396 -53340578 - L2 LINE L2 -361 3058 2699 2 967 349 203 50 25 chr15 50154404 50154525 -53340449 + Lx9 LINE L1 7514 7637 -7 2 967 232 231 37 49 chr15 50154622 50154704 -53340270 - Charlie7 DNA MER1_type -1552 1060 980 2 967 1186 205 55 112 chr15 50154707 50154953 -53340021 + Lx9 LINE L1 7247 7488 -156 2 967 378 0 0 0 chr15 50154953 50154995 -53339979 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 967 1186 205 55 112 chr15 50154995 50155023 -53339951 + Lx9 LINE L1 7489 7510 -134 2 967 205 0 54 54 chr15 50155023 50155060 -53339914 + (CAGAGA)n Simple_repeat Simple_repeat 6 42 0 2 967 1186 205 55 112 chr15 50155060 50155169 -53339805 + Lx9 LINE L1 7511 7609 -35 2 967 22 35 0 0 chr15 50155175 50155204 -53339770 + AT_rich Low_complexity Low_complexity 1 29 0 2 967 2030 8 0 4 chr15 50155307 50155542 -53339432 + L1Md_A LINE L1 6348 6581 -1 2 967 205 286 18 0 chr15 50157270 50157326 -53337648 + (CAGAGA)n Simple_repeat Simple_repeat 2 58 0 2 967 907 71 0 0 chr15 50157585 50157711 -53337263 - L1_Mus1 LINE L1 0 6567 6442 2 967 25 51 0 0 chr15 50158484 50158523 -53336451 + AT_rich Low_complexity Low_complexity 1 39 0 2 967 242 217 21 21 chr15 50158674 50158768 -53336206 + (TA)n Simple_repeat Simple_repeat 1 94 0 2 967 296 308 171 20 chr15 50159382 50159528 -53335446 - MLT1H2 LTR MaLR -35 454 287 2 967 2645 104 8 8 chr15 50159842 50160239 -53334735 - RLTR9D LTR ERVK -6 397 1 2 967 447 279 10 0 chr15 50160240 50160344 -53334630 + PB1D7 SINE Alu 10 114 -6 2 967 576 164 0 0 chr15 50160838 50160948 -53334026 + (TA)n Simple_repeat Simple_repeat 1 110 0 2 967 399 322 68 64 chr15 50161856 50162075 -53332899 + MLT1B LTR MaLR 157 376 -14 2 967 312 91 0 0 chr15 50162728 50162772 -53332202 + (TTCTCC)n Simple_repeat Simple_repeat 2 45 0 2 967 462 114 0 0 chr15 50163105 50163175 -53331799 + (CA)n Simple_repeat Simple_repeat 2 71 0 2 967 209 213 0 0 chr15 50163512 50163559 -53331415 + T-rich Low_complexity Low_complexity 1 47 0 2 967 844 172 35 6 chr15 50163808 50163978 -53330996 + B2_Mm2 SINE B2 2 176 -19 2 967 618 51 0 0 chr15 50163981 50164059 -53330915 + (GGGA)n Simple_repeat Simple_repeat 4 81 0 2 967 2797 84 47 0 chr15 50167074 50167456 -53327518 - MTB LTR MaLR 0 400 1 2 967 794 103 9 0 chr15 50167491 50167607 -53327367 - B1_Mus1 SINE Alu 0 148 32 2 967 32 0 0 0 chr15 50167886 50167918 -53327056 + AT_rich Low_complexity Low_complexity 1 32 0 2 967 231 103 0 0 chr15 50168199 50168238 -53326736 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 967 267 31 0 0 chr15 50168240 50168272 -53326702 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 967 180 0 0 0 chr15 50168272 50168291 -53326683 + (GA)n Simple_repeat Simple_repeat 1 20 0 2 967 454 382 38 16 chr15 50168463 50168649 -53326325 - B3A SINE B2 -8 190 1 2 967 401 319 82 31 chr15 50169248 50169662 -53325312 - L1MD3 LINE L1 -26 7969 7555 2 967 227 226 299 0 chr15 50169740 50169877 -53325097 - L1MC3 LINE L1 -23 7762 7585 2 967 368 287 70 0 chr15 50169951 50170108 -53324866 + L1MC3 LINE L1 6412 6579 -1206 2 967 230 272 32 32 chr15 50170154 50170249 -53324725 - L1MB3 LINE L1 -71 6112 6018 2 967 410 0 0 20 chr15 50170787 50170838 -53324136 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 967 280 311 30 18 chr15 50170988 50171152 -53323822 - L1MCb LINE L1 -5012 1033 868 2 967 279 0 0 0 chr15 50171751 50171782 -53323192 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 2 967 1600 221 108 3 chr15 50172305 50172686 -53322288 - MTC LTR MaLR 0 421 1 2 967 284 349 13 38 chr15 50173044 50173282 -53321692 + L1M5 LINE L1 2769 3000 -3146 2 967 5489 239 24 13 chr15 50173351 50174443 -53320531 + Lx7 LINE L1 6061 7162 -534 2 967 441 0 0 0 chr15 50174443 50174492 -53320482 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 967 5489 240 27 21 chr15 50174492 50174696 -53320278 + Lx7 LINE L1 7163 7420 -276 2 967 240 86 0 0 chr15 50174696 50174731 -53320243 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 967 684 241 42 66 chr15 50174731 50175017 -53319957 + Lx7 LINE L1 7421 7696 0 2 967 470 276 9 0 chr15 50175741 50175876 -53319098 + Lx6 LINE L1 6250 6385 -1311 2 967 542 331 31 33 chr15 50175917 50176276 -53318698 + L1MC4 LINE L1 6656 7013 -1029 2 967 686 190 42 7 chr15 50176706 50176849 -53318125 + B1_Mur4 SINE Alu 1 148 -2 2 967 244 264 54 54 chr15 50176989 50177012 -53317962 - Lx7 LINE L1 0 7460 7441 2 967 3843 137 5 10 chr15 50177012 50177637 -53317337 - Lx LINE L1 -5 6649 6028 2 967 286 214 204 14 chr15 50177637 50177747 -53317227 - Lx7 LINE L1 -18 7678 7557 2 967 264 30 0 0 chr15 50177756 50177789 -53317185 + (CAT)n Simple_repeat Simple_repeat 2 34 0 2 967 455 136 18 18 chr15 50178142 50178254 -53316720 + (TA)n Simple_repeat Simple_repeat 2 113 0 2 967 234 0 0 0 chr15 50178254 50178280 -53316694 + (GA)n Simple_repeat Simple_repeat 2 27 0 2 967 25 0 0 0 chr15 50178411 50178436 -53316538 + AT_rich Low_complexity Low_complexity 1 25 0 2 967 4129 159 29 15 chr15 50178521 50179237 -53315737 + L1VL2 LINE L1 98 823 -5512 2 967 28965 84 48 0 chr15 50179237 50184113 -53310861 + L1Md_F2 LINE L1 479 5585 -298 2 967 8085 52 1 0 chr15 50184115 50185106 -53309868 + L1Md_F2 LINE L1 5588 6579 -3 2 967 468 0 0 0 chr15 50185152 50185204 -53309770 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 967 23878 163 20 5 chr15 50185204 50187884 -53307090 + Lx2 LINE L1 1120 3837 -2046 2 967 240 59 0 0 chr15 50187884 50187918 -53307056 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2 967 23878 180 29 11 chr15 50187918 50190212 -53304762 + Lx2 LINE L1 3838 6158 -839 2 967 528 16 0 0 chr15 50190212 50190273 -53304701 + (TC)n Simple_repeat Simple_repeat 1 61 0 2 967 3979 232 79 57 chr15 50190273 50191067 -53303907 + Lx2 LINE L1 6159 6995 -2 2 967 25 31 0 0 chr15 50191521 50191553 -53303421 + AT_rich Low_complexity Low_complexity 1 32 0 2 967 250 324 0 0 chr15 50192268 50192342 -53302632 - ID4 SINE ID -6 77 4 2 967 181 352 124 11 chr15 50193401 50193490 -53301484 + MIR3 SINE MIR 8 106 -102 2 967 283 91 0 52 chr15 50193810 50193868 -53301106 + (TCCC)n Simple_repeat Simple_repeat 3 57 0 2 967 37 86 0 0 chr15 50194271 50194364 -53300610 + AT_rich Low_complexity Low_complexity 1 93 0 2 967 2928 102 43 2 chr15 50195324 50195767 -53299207 - L1_Mus4 LINE L1 -8 6628 6168 2 967 595 239 73 37 chr15 50195783 50195974 -53299000 - Lx5 LINE L1 -3 7047 6850 2 120 35420 42 6 2 chr15 50196008 50201150 -53293824 + L1Md_T LINE L1 378 5589 -297 2 968 9005 4 0 0 chr15 50201150 50202146 -53292828 + L1Md_T LINE L1 5590 6585 0 2 968 312 360 168 15 chr15 50202635 50202968 -53292006 + L3b LINE CR1 1 384 -98 2 968 453 314 13 13 chr15 50203005 50203163 -53291811 - L3b LINE CR1 -130 352 195 2 968 682 200 0 37 chr15 50204153 50204288 -53290686 + B1_Mur2 SINE Alu 2 131 -18 2 968 300 111 0 0 chr15 50204447 50204492 -53290482 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 968 282 56 0 0 chr15 50204669 50204705 -53290269 + (TTTTG)n Simple_repeat Simple_repeat 4 39 0 2 968 218 158 0 34 chr15 50204728 50204787 -53290187 + (TTG)n Simple_repeat Simple_repeat 3 59 0 3 968 403 198 0 24 chr15 50204789 50204872 -53290102 - B1_Mus2 SINE Alu -37 110 30 3 968 486 0 0 0 chr15 50205464 50205518 -53289456 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 968 369 0 0 0 chr15 50205518 50205558 -53289416 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 968 1248 326 124 25 chr15 50205559 50206245 -53288729 - Lx8 LINE L1 -147 7326 6573 3 968 6301 97 45 9 chr15 50206271 50207197 -53287777 + Lx LINE L1 5695 6654 0 3 968 1340 72 5 0 chr15 50207198 50207407 -53287567 + (GAAA)n Simple_repeat Simple_repeat 1 210 0 3 968 26 0 0 0 chr15 50207710 50207736 -53287238 + AT_rich Low_complexity Low_complexity 1 26 0 3 968 275 222 48 0 chr15 50207792 50207855 -53287119 - ID_B1 SINE B4 0 224 159 3 968 227 351 51 42 chr15 50207942 50208159 -53286815 - L1M2c LINE L1 -5161 1628 1410 3 968 264 235 0 0 chr15 50210131 50210199 -53284775 + GA-rich Low_complexity Low_complexity 3 70 0 3 968 489 17 0 0 chr15 50210615 50210673 -53284301 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 968 321 197 0 0 chr15 50211526 50211592 -53283382 + T-rich Low_complexity Low_complexity 1 66 0 3 968 306 108 0 39 chr15 50211578 50211655 -53283319 + (TTTTG)n Simple_repeat Simple_repeat 2 75 0 3 968 369 345 78 24 chr15 50212030 50212235 -53282739 + B3 SINE B2 1 216 0 3 968 1887 150 28 20 chr15 50212354 50212707 -53282267 + RLTR15 LTR ERVK 4 359 0 3 968 351 323 105 23 chr15 50214272 50214529 -53280445 + L1MD3 LINE L1 7712 7989 -6 3 968 383 346 29 29 chr15 50214536 50214673 -53280301 + ID_B1 SINE B4 86 222 -2 3 968 31 76 0 0 chr15 50214675 50214741 -53280233 + AT_rich Low_complexity Low_complexity 1 66 0 3 968 528 239 72 52 chr15 50215213 50215407 -53279567 + B3A SINE B2 1 198 0 3 968 2909 172 34 30 chr15 50215429 50215997 -53278977 - Lx2 LINE L1 0 6997 6428 3 968 518 323 133 9 chr15 50215999 50216224 -53278750 - RMER15 LTR ERVL -111 464 212 3 968 477 0 0 0 chr15 50216788 50216841 -53278133 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 968 379 360 28 28 chr15 50216989 50217169 -53277805 + L3 LINE CR1 3931 4110 -379 3 968 7602 69 8 2 chr15 50217414 50218560 -53276414 - L1Md_F2 LINE L1 -1 6581 5429 3 968 7401 87 17 0 chr15 50218555 50219492 -53275482 + L1_Mm LINE L1 4295 5232 -651 3 968 432 0 0 0 chr15 50219492 50219540 -53275434 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 968 7401 87 17 0 chr15 50219540 50219637 -53275337 + L1_Mm LINE L1 5233 5345 -538 3 968 417 20 0 0 chr15 50219740 50219790 -53275184 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 968 1863 176 56 81 chr15 50219823 50220379 -53274595 - RMER17D2 LTR ERVK -1 808 267 3 968 8899 70 1 5 chr15 50220381 50222277 -53272697 - L1Md_F2 LINE L1 -13 6569 4679 3 968 1843 94 0 0 chr15 50222278 50222532 -53272442 - RMER17D2 LTR ERVK -497 254 1 3 968 425 76 15 0 chr15 50223149 50223215 -53271759 + (TG)n Simple_repeat Simple_repeat 1 67 0 3 968 438 272 94 22 chr15 50223384 50223567 -53271407 - MLT1B LTR MaLR -194 180 3 3 968 1407 258 60 31 chr15 50223846 50224262 -53270712 - Lx6 LINE L1 -1146 6314 5887 3 968 553 209 18 9 chr15 50224642 50224753 -53270221 - RMER20A LTR ERVK -394 122 11 3 968 351 0 0 0 chr15 50224962 50225001 -53269973 + (TTA)n Simple_repeat Simple_repeat 2 40 0 3 968 27 0 0 0 chr15 50225909 50225936 -53269038 + AT_rich Low_complexity Low_complexity 1 27 0 3 968 244 339 36 0 chr15 50227248 50227360 -53267614 + PB1D10 SINE Alu 1 116 -1 3 968 23 0 0 0 chr15 50227365 50227388 -53267586 + AT_rich Low_complexity Low_complexity 1 23 0 3 968 638 35 12 0 chr15 50227491 50227576 -53267398 + (TG)n Simple_repeat Simple_repeat 1 86 0 3 968 647 328 34 10 chr15 50227983 50228401 -53266573 + Lx8 LINE L1 5286 5705 -175 3 968 300 212 182 25 chr15 50228981 50229102 -53265872 - Lx5 LINE L1 -4 7046 6907 3 968 352 352 16 0 chr15 50229132 50229257 -53265717 + Lx8 LINE L1 6304 6430 -1043 3 968 742 289 19 5 chr15 50229272 50229477 -53265497 + Lx8 LINE L1 6753 6960 -513 3 968 2087 91 3 4 chr15 50229477 50229798 -53265176 - MTB LTR MaLR 0 407 1 3 968 706 330 42 46 chr15 50229812 50230095 -53264879 + Lx8 LINE L1 6967 7248 -225 3 968 344 40 20 0 chr15 50230142 50230192 -53264782 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 968 355 233 143 30 chr15 50230281 50230414 -53264560 + B1_Mur1 SINE Alu 2 149 0 3 968 377 20 0 20 chr15 50230416 50230467 -53264507 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 968 238 329 51 114 chr15 50230755 50230930 -53264044 + B4 SINE B4 105 268 -24 3 968 372 270 22 0 chr15 50231407 50231496 -53263478 - LTR33B LTR ERVL -318 185 95 3 968 211 410 26 32 chr15 50232034 50232223 -53262751 + MIRc SINE MIR 6 193 -75 3 968 283 259 79 45 chr15 50233663 50233732 -53261242 - MLT1A0 LTR MaLR -2 363 292 3 968 350 312 120 0 chr15 50233732 50233857 -53261117 + RSINE1 SINE B4 3 142 -23 3 968 611 329 52 31 chr15 50233884 50234194 -53260780 - MLT1A0 LTR MaLR -46 362 6 3 968 435 335 76 29 chr15 50235192 50235469 -53259505 + B4A SINE B4 1 290 -2 3 968 244 257 53 13 chr15 50235507 50235582 -53259392 + MIR SINE MIR 97 174 -88 3 968 294 95 0 0 chr15 50235767 50235809 -53259165 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 968 211 400 32 0 chr15 50237089 50237214 -53257760 - L2c LINE L2 -14 3373 3245 3 968 241 366 30 22 chr15 50238323 50238457 -53256517 - Tigger13a DNA MER2_type -151 620 486 3 968 896 258 39 0 chr15 50238565 50238798 -53256176 - Lx6 LINE L1 -82 7378 7137 3 968 379 258 6 6 chr15 50238807 50238963 -53256011 + (TA)n Simple_repeat Simple_repeat 1 156 0 3 968 624 144 34 17 chr15 50238988 50239164 -53255810 + (TA)n Simple_repeat Simple_repeat 2 180 0 3 968 5635 222 65 38 chr15 50239166 50240878 -53254096 - Lx6 LINE L1 -335 7125 5355 3 968 297 0 0 0 chr15 50240878 50240911 -53254063 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 968 3540 203 46 50 chr15 50240911 50241314 -53253660 - Lx6 LINE L1 -526 5354 4966 3 968 22 0 0 0 chr15 50241737 50241759 -53253215 + AT_rich Low_complexity Low_complexity 1 22 0 3 968 640 281 28 57 chr15 50242127 50242338 -53252636 + MTEa LTR MaLR 13 217 -162 3 968 1498 141 72 7 chr15 50242359 50242519 -53252455 + RLTR13D3 LTR ERVK 707 866 -248 3 968 585 0 0 0 chr15 50242519 50242584 -53252390 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 968 1498 141 72 7 chr15 50242584 50242702 -53252272 + RLTR13D3 LTR ERVK 867 1002 -112 3 968 447 324 21 26 chr15 50242754 50242944 -53252030 + MTEa LTR MaLR 189 377 -2 3 968 2935 149 45 10 chr15 50243233 50243743 -53251231 - Lx2B LINE L1 -2 6998 6471 3 968 4368 178 42 11 chr15 50243745 50245070 -53249904 + Lx2B LINE L1 5095 6460 -540 3 968 1092 104 11 11 chr15 50245083 50245267 -53249707 - L1Md_F2 LINE L1 -2 6580 6397 3 968 1332 65 5 21 chr15 50245261 50245450 -53249524 + L1Md_F2 LINE L1 6197 6382 -200 3 968 581 309 23 11 chr15 50246099 50246276 -53248698 - U2 snRNA snRNA -9 179 1 3 968 391 331 84 28 chr15 50246467 50246610 -53248364 + B3A SINE B2 20 170 -28 3 968 935 286 75 72 chr15 50246617 50247005 -53247969 + MTD LTR MaLR 26 414 -5 3 968 47 86 0 0 chr15 50247013 50247130 -53247844 + AT_rich Low_complexity Low_complexity 1 117 0 3 968 207 167 54 32 chr15 50247135 50247193 -53247781 + (TATAA)n Simple_repeat Simple_repeat 4 62 0 3 968 345 167 0 0 chr15 50247193 50247265 -53247709 + Lx2B LINE L1 6928 6999 -1 3 968 207 167 54 32 chr15 50247265 50247299 -53247675 + (TATAA)n Simple_repeat Simple_repeat 3 38 0 3 968 255 331 51 38 chr15 50247599 50247756 -53247218 + RSINE1 SINE B4 3 161 -4 3 968 591 126 0 0 chr15 50247761 50247856 -53247118 + (CA)n Simple_repeat Simple_repeat 2 96 0 3 968 336 310 55 44 chr15 50247982 50248164 -53246810 - MIR SINE MIR -58 204 21 3 968 435 211 0 0 chr15 50249358 50249434 -53245540 + B4 SINE B4 2 77 -215 3 968 311 287 11 11 chr15 50249551 50249646 -53245328 + GA-rich Low_complexity Low_complexity 2 96 0 3 968 5414 191 17 8 chr15 50249662 50250722 -53244252 - Lx2B LINE L1 -6 6994 5925 3 968 240 345 35 0 chr15 50251485 50251572 -53243402 + B4A SINE B4 4 93 -199 3 968 294 336 41 7 chr15 50251574 50251721 -53243253 + RSINE1 SINE B4 3 154 -11 3 968 1045 97 21 0 chr15 50251774 50251918 -53243056 + B1_Mus1 SINE Alu 2 148 0 3 968 513 184 0 0 chr15 50251920 50252034 -53242940 + A-rich Low_complexity Low_complexity 1 114 0 3 968 5020 87 17 17 chr15 50252034 50252912 -53242062 - L1_Mus2 LINE L1 -522 6044 5176 3 968 210 37 0 0 chr15 50252912 50252939 -53242035 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 968 1011 97 8 0 chr15 50252940 50253074 -53241900 - B1_Mus2 SINE Alu -12 135 1 3 968 5020 115 1 35 chr15 50253074 50253157 -53241817 - L1_Mus2 LINE L1 -708 5175 5094 3 968 3817 79 15 26 chr15 50253157 50253236 -53241738 + L1_Mus2 LINE L1 6029 6108 -458 3 968 3141 25 34 41 chr15 50253236 50253650 -53241324 - IAPLTR2a LTR ERVK 0 411 1 3 968 3817 79 15 26 chr15 50253650 50254113 -53240861 + L1_Mus2 LINE L1 6109 6565 -1 3 968 23 33 0 0 chr15 50254113 50254143 -53240831 + AT_rich Low_complexity Low_complexity 1 30 0 3 968 468 274 91 69 chr15 50255291 50255522 -53239452 + MIRb SINE MIR 7 242 -26 3 968 201 108 0 0 chr15 50255687 50255724 -53239250 + (TC)n Simple_repeat Simple_repeat 1 37 0 3 968 216 0 0 0 chr15 50255724 50255748 -53239226 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 968 31 0 0 0 chr15 50256038 50256069 -53238905 + AT_rich Low_complexity Low_complexity 1 31 0 3 968 30365 52 21 2 chr15 50257332 50262117 -53232857 - L1Md_F3 LINE L1 0 6584 1833 3 968 327 259 165 15 chr15 50262100 50262233 -53232741 + Lx4B LINE L1 6900 7052 -6 3 968 322 398 0 24 chr15 50264492 50264618 -53230356 + RSINE1 SINE B4 43 165 0 3 968 306 265 20 30 chr15 50264661 50264762 -53230212 + Lx7 LINE L1 7268 7367 -329 3 968 981 106 50 0 chr15 50264769 50264910 -53230064 - B1_Mus1 SINE Alu 0 148 1 3 968 309 51 50 17 chr15 50269658 50269718 -53225256 + (TTTTG)n Simple_repeat Simple_repeat 3 64 0 3 968 37812 44 0 3 chr15 50269767 50276020 -53218954 - L1Md_T LINE L1 0 6585 253 3 968 816 182 14 0 chr15 50276024 50276167 -53218807 - B1_Mus1 SINE Alu 0 148 4 3 968 213 380 0 25 chr15 50276192 50276273 -53218701 - ID_B1 SINE B4 -67 157 79 3 968 447 327 63 17 chr15 50276338 50276512 -53218462 - B3A SINE B2 -16 182 1 4 968 716 77 10 0 chr15 50276536 50276640 -53218334 + (TTTC)n Simple_repeat Simple_repeat 3 107 0 4 968 3909 75 37 7 chr15 50276640 50277179 -53217795 - L1_Mus1 LINE L1 -89 6478 5924 4 968 24 0 0 0 chr15 50277711 50277735 -53217239 + AT_rich Low_complexity Low_complexity 1 24 0 4 968 243 392 93 62 chr15 50278147 50278340 -53216634 - LTR33A_ LTR ERVL -323 208 10 4 968 303 295 19 9 chr15 50278454 50278560 -53216414 + GA-rich Low_complexity Low_complexity 4 110 0 4 968 22 56 0 0 chr15 50278908 50278944 -53216030 + AT_rich Low_complexity Low_complexity 1 36 0 4 968 666 281 34 45 chr15 50279846 50280193 -53214781 + MTEa LTR MaLR 30 377 -2 4 968 308 264 113 24 chr15 50280540 50280664 -53214310 - MTE2b LTR MaLR -36 343 209 4 968 459 73 0 0 chr15 50280728 50280796 -53214178 + (TA)n Simple_repeat Simple_repeat 1 68 0 4 968 302 148 74 0 chr15 50280921 50280975 -53213999 - MTE2b LTR MaLR -321 58 1 4 968 23 33 0 0 chr15 50281863 50281893 -53213081 + AT_rich Low_complexity Low_complexity 1 30 0 4 968 243 175 48 36 chr15 50282213 50282296 -53212678 - L1_Rod LINE L1 -28 5819 5736 4 968 366 302 35 21 chr15 50282433 50282575 -53212399 + Lx9 LINE L1 7293 7436 -208 4 968 261 0 0 0 chr15 50282580 50282609 -53212365 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 968 288 0 0 0 chr15 50283313 50283345 -53211629 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 968 759 259 13 74 chr15 50283986 50284215 -53210759 + B3 SINE B2 2 216 0 4 968 803 271 103 83 chr15 50285470 50285820 -53209154 + MTEa LTR MaLR 11 367 -12 4 968 687 264 70 82 chr15 50285895 50286296 -53208678 + Lx9 LINE L1 7206 7601 -43 4 968 38 22 0 0 chr15 50286296 50286341 -53208633 + AT_rich Low_complexity Low_complexity 1 45 0 4 968 24 0 0 0 chr15 50286924 50286948 -53208026 + AT_rich Low_complexity Low_complexity 1 24 0 4 968 457 277 47 35 chr15 50287514 50287686 -53207288 - B3A SINE B2 0 198 25 4 968 602 287 0 23 chr15 50288317 50288492 -53206482 - Lx9 LINE L1 -238 7406 7236 4 968 448 185 0 18 chr15 50288504 50288614 -53206360 + (TG)n Simple_repeat Simple_repeat 2 109 0 4 968 385 218 9 0 chr15 50288675 50288785 -53206189 + Lx9 LINE L1 7532 7642 -2 4 968 12149 202 28 10 chr15 50288818 50291842 -53203132 + Lx6 LINE L1 3162 6243 -1217 4 968 1619 149 17 110 chr15 50291881 50292363 -53202611 - RMER17C LTR ERVK -522 436 19 4 968 3259 269 106 14 chr15 50292409 50293281 -53201693 + Lx6 LINE L1 6320 7269 -191 4 968 224 59 0 29 chr15 50293281 50293316 -53201658 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 4 968 3259 269 106 14 chr15 50293316 50293474 -53201500 + Lx6 LINE L1 7270 7445 -15 4 968 267 228 24 0 chr15 50293476 50293599 -53201375 + (TA)n Simple_repeat Simple_repeat 1 126 0 4 968 31078 154 18 23 chr15 50295392 50296388 -53198586 + L1Md_F2 LINE L1 418 1404 -4479 4 968 207 0 0 0 chr15 50296388 50296411 -53198563 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 4 968 31078 76 15 2 chr15 50296411 50300535 -53194439 + L1Md_F2 LINE L1 1405 5584 -299 4 968 7769 61 6 1 chr15 50300536 50301525 -53193449 + L1Md_F2 LINE L1 5587 6580 -2 4 968 746 299 129 29 chr15 50302601 50303011 -53191963 + MLT1F LTR MaLR 84 534 -14 4 968 23 33 0 0 chr15 50303268 50303298 -53191676 + AT_rich Low_complexity Low_complexity 1 30 0 4 968 29 28 0 0 chr15 50303574 50303610 -53191364 + AT_rich Low_complexity Low_complexity 1 36 0 4 968 256 143 0 35 chr15 50305023 50305081 -53189893 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 968 605 235 6 0 chr15 50305123 50305302 -53189672 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 968 428 348 145 55 chr15 50306311 50307344 -53187630 + L2a LINE L2 1342 2467 -952 4 968 248 320 30 69 chr15 50307621 50307752 -53187222 + ID_B1 SINE B4 96 221 -3 4 968 576 219 12 37 chr15 50307839 50308167 -53186807 + GA-rich Low_complexity Low_complexity 1 319 0 4 968 266 358 105 13 chr15 50308313 50308466 -53186508 + L2a LINE L2 2952 3118 -308 4 968 290 45 23 0 chr15 50308607 50308651 -53186323 + (TTG)n Simple_repeat Simple_repeat 2 46 0 4 968 1048 258 131 27 chr15 50309064 50309399 -53185575 + MTEb LTR MaLR 1 370 -9 4 968 366 80 0 0 chr15 50309535 50309585 -53185389 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 968 249 300 17 0 chr15 50309641 50309701 -53185273 - RSINE1 SINE B4 -80 85 25 4 968 1641 222 23 67 chr15 50309704 50310095 -53184879 - ORR1C1 LTR MaLR 0 378 5 4 968 4531 244 75 25 chr15 50310096 50311397 -53183577 - ORR1C1-int LTR MaLR -4 1366 1 4 968 1586 191 44 57 chr15 50311397 50311780 -53183194 - ORR1C1 LTR MaLR 0 378 1 4 968 874 284 29 35 chr15 50312278 50312625 -53182349 - RLTR15 LTR ERVK -13 346 2 4 968 267 296 80 0 chr15 50312630 50312718 -53182256 - Lx8 LINE L1 -457 7016 6922 4 968 3212 99 19 4 chr15 50312716 50313192 -53181782 - L1_Mm LINE L1 -255 5628 5146 4 968 1590 70 16 77 chr15 50313192 50313493 -53181481 + L1_Mus2 LINE L1 6335 6566 0 4 968 330 247 25 0 chr15 50313494 50313575 -53181399 - Lx8 LINE L1 -543 6930 6848 4 968 1163 285 0 14 chr15 50314012 50314290 -53180684 - ORR1D1 LTR MaLR -53 321 48 4 968 377 96 0 0 chr15 50314371 50314423 -53180551 + RMER6D LTR ERVK 1 52 -668 4 968 439 53 18 0 chr15 50314423 50314480 -53180494 - MTA_Mm LTR MaLR 0 400 343 4 968 37897 17 2 8 chr15 50314481 50320307 -53174667 + L1Md_A LINE L1 1 5586 -297 4 968 8713 19 0 0 chr15 50320307 50321303 -53173671 + L1Md_A LINE L1 5587 6582 0 4 968 516 59 0 0 chr15 50321777 50321845 -53173129 + (CA)n Simple_repeat Simple_repeat 2 69 0 4 968 200 125 0 24 chr15 50322327 50322368 -53172606 + (TTTTG)n Simple_repeat Simple_repeat 4 43 0 4 968 2591 47 47 0 chr15 50322491 50322829 -53172145 - MTA_Mm LTR MaLR -42 354 1 4 968 2950 180 86 39 chr15 50322829 50323103 -53171871 + RMER6D LTR ERVK 48 320 -400 4 968 642 26 0 0 chr15 50323103 50323179 -53171795 + (GA)n Simple_repeat Simple_repeat 1 76 0 4 968 2950 180 86 39 chr15 50323179 50323387 -53171587 + RMER6D LTR ERVK 321 563 -157 4 968 4667 41 0 0 chr15 50323387 50323946 -53171028 + L1Md_T LINE L1 6022 6580 -2 4 968 2950 180 86 39 chr15 50323946 50324105 -53170869 + RMER6D LTR ERVK 564 719 -1 4 968 508 339 123 0 chr15 50324324 50324519 -53170455 - ID_B1 SINE B4 -4 220 2 4 968 262 241 17 0 chr15 50324930 50324988 -53169986 + RMER15 LTR ERVL 1 59 -516 4 968 322 214 33 22 chr15 50325041 50325132 -53169842 + RMER15 LTR ERVL 27 118 -457 4 968 1859 168 58 26 chr15 50325138 50325481 -53169493 - ORR1B1 LTR MaLR 0 394 41 4 968 713 278 24 5 chr15 50325609 50325815 -53169159 + RMER15 LTR ERVL 363 572 -3 4 968 198 0 0 0 chr15 50326048 50326070 -53168904 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 4 968 459 286 66 127 chr15 50326156 50326384 -53168590 - MTE2a LTR MaLR -14 365 152 4 968 1357 311 61 14 chr15 50326391 50326831 -53168143 + MT2A LTR ERVL 4 464 -69 4 968 232 231 32 21 chr15 50326831 50326924 -53168050 + (TATAA)n Simple_repeat Simple_repeat 5 98 0 4 968 186 133 0 0 chr15 50326974 50327004 -53167970 + (A)n Simple_repeat Simple_repeat 1 30 0 4 968 225 117 0 48 chr15 50327141 50327204 -53167770 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 4 968 246 245 48 14 chr15 50327224 50327369 -53167605 + (TTATA)n Simple_repeat Simple_repeat 2 151 0 4 968 207 149 93 31 chr15 50327321 50327418 -53167556 + (TA)n Simple_repeat Simple_repeat 2 104 0 4 968 246 115 0 62 chr15 50327427 50327492 -53167482 + MT2A LTR ERVL 473 533 0 4 968 298 324 56 19 chr15 50327506 50327613 -53167361 - MTE2a LTR MaLR -235 144 34 4 968 183 42 0 0 chr15 50327742 50327766 -53167208 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4 968 477 0 0 0 chr15 50327837 50327890 -53167084 + (GA)n Simple_repeat Simple_repeat 2 54 0 4 968 303 28 0 0 chr15 50328123 50328159 -53166815 + (GGGA)n Simple_repeat Simple_repeat 4 39 0 4 968 393 308 24 24 chr15 50328503 50328626 -53166348 + MER21B LTR ERV1 627 749 -114 4 968 572 153 0 9 chr15 50329560 50329665 -53165309 + CT-rich Low_complexity Low_complexity 8 111 0 4 968 360 0 0 0 chr15 50329665 50329705 -53165269 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 968 198 0 0 0 chr15 50330330 50330352 -53164622 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 4 968 242 144 88 11 chr15 50331410 50331501 -53163473 + (TA)n Simple_repeat Simple_repeat 1 98 0 4 968 192 152 46 39 chr15 50331503 50331633 -53163341 + (TATAA)n Simple_repeat Simple_repeat 5 135 0 4 1 645 133 22 0 chr15 50331640 50331775 -53163199 + (TA)n Simple_repeat Simple_repeat 1 138 0 4 969 287 324 27 54 chr15 50331990 50332137 -53162837 + B3A SINE B2 55 197 -1 4 969 191 381 31 31 chr15 50332421 50332551 -53162423 + MER5A DNA MER1_type 1 130 -59 4 969 231 284 0 0 chr15 50333339 50333406 -53161568 - B4A SINE B4 -224 68 2 4 969 3188 93 35 0 chr15 50335765 50336217 -53158757 - L1_Mus3 LINE L1 -14 6624 6157 4 969 731 65 0 0 chr15 50336226 50336319 -53158655 + L1_Mus3 LINE L1 6024 6116 -522 4 969 356 307 12 74 chr15 50336534 50336696 -53158278 - MER5A1 DNA MER1_type -12 154 3 4 969 207 200 0 0 chr15 50336725 50336765 -53158209 + T-rich Low_complexity Low_complexity 3 42 0 4 969 235 0 0 54 chr15 50336779 50336816 -53158158 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 969 309 149 0 0 chr15 50337000 50337067 -53157907 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 969 24 32 0 0 chr15 50337993 50338024 -53156950 + AT_rich Low_complexity Low_complexity 1 31 0 4 969 496 316 27 37 chr15 50338165 50338359 -53156615 + B3A SINE B2 20 213 -3 4 969 228 261 130 71 chr15 50338594 50338720 -53156254 + MIRc SINE MIR 69 207 -61 4 969 426 114 0 0 chr15 50338720 50338790 -53156184 + (CA)n Simple_repeat Simple_repeat 2 71 0 4 969 228 261 130 71 chr15 50338790 50338832 -53156142 + MIRc SINE MIR 208 247 -21 4 969 213 337 153 24 chr15 50338967 50339195 -53155779 + MIRb SINE MIR 7 258 -4 4 969 600 144 19 9 chr15 50340553 50340658 -53154316 - RMER10B LTR ERVL 0 398 293 4 969 188 314 86 21 chr15 50340762 50340902 -53154072 + MIRb SINE MIR 90 238 -30 4 969 851 307 33 0 chr15 50341051 50341325 -53153649 + B4A SINE B4 2 284 -8 4 969 30 27 0 0 chr15 50341955 50341992 -53152982 + AT_rich Low_complexity Low_complexity 1 37 0 4 969 443 179 50 28 chr15 50342065 50342175 -53152799 - B1_Mm SINE Alu 0 149 39 4 969 419 385 51 13 chr15 50342902 50343136 -53151838 + B4A SINE B4 49 291 -1 4 969 266 47 47 0 chr15 50343165 50343208 -53151766 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 4 969 414 39 0 0 chr15 50343208 50343260 -53151714 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 969 280 273 23 0 chr15 50343438 50343526 -53151448 - Zaphod DNA Tip100 -46 3985 3896 4 969 536 251 60 153 chr15 50343608 50344026 -53150948 - MTE2a LTR MaLR 0 379 1 4 969 829 276 56 100 chr15 50344375 50344737 -53150237 - ORR1E LTR MaLR 0 379 1 4 969 1596 228 61 8 chr15 50344816 50345211 -53149763 - MTD LTR MaLR -14 405 3 4 969 709 54 0 0 chr15 50345247 50345340 -53149634 - MusHAL1 LINE L1 -2033 679 587 4 969 9664 165 30 9 chr15 50345337 50347961 -53147013 + Lx LINE L1 3967 6654 0 5 969 763 306 91 98 chr15 50350111 50350571 -53144403 - RMER13A LTR ERVK -306 554 98 5 969 472 337 112 56 chr15 50351161 50351519 -53143455 + MLT1A1 LTR MaLR 18 395 -13 5 969 183 258 97 0 chr15 50351882 50351944 -53143030 + L3 LINE CR1 1252 1319 -3170 5 969 387 0 0 0 chr15 50352369 50352412 -53142562 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 969 21 0 0 0 chr15 50352701 50352722 -53142252 + AT_rich Low_complexity Low_complexity 1 21 0 5 969 258 315 81 27 chr15 50353420 50353531 -53141443 - MER63B DNA AcHobo -2 434 318 5 969 253 345 12 0 chr15 50353847 50353931 -53141043 - L2a LINE L2 -40 3386 3302 5 969 244 362 69 63 chr15 50354249 50354438 -53140536 + LTR33C LTR ERVL 434 623 -6 5 969 256 321 167 48 chr15 50354457 50354709 -53140265 - L2a LINE L2 -337 3082 2801 5 969 690 190 8 52 chr15 50354847 50354997 -53139977 - B1_Mur3 SINE Alu -5 145 2 5 969 444 19 0 0 chr15 50355193 50355246 -53139728 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 969 259 326 150 0 chr15 50355334 50355521 -53139453 + MLT1H LTR MaLR 5 219 -360 5 969 1504 28 50 0 chr15 50355852 50356033 -53138941 + B2_Mm1a SINE B2 2 191 -2 5 969 33329 71 9 11 chr15 50357665 50359292 -53135682 - L1Md_F2 LINE L1 -15 6567 4878 5 969 228 153 62 92 chr15 50359292 50359357 -53135617 + RMER20A LTR ERVK 186 248 -268 5 969 33329 71 9 11 chr15 50359357 50359436 -53135538 - L1Md_F2 LINE L1 -15 4877 4794 5 969 3297 21 21 3 chr15 50359436 50359825 -53135149 + MTA_Mm LTR MaLR 1 396 0 5 969 9363 16 18 1 chr15 50359825 50360905 -53134069 + MTA_Mm-int LTR MaLR 1 1098 0 5 969 3296 26 21 0 chr15 50360905 50361293 -53133681 + MTA_Mm LTR MaLR 1 396 0 5 969 33329 103 26 33 chr15 50361293 50365917 -53129057 - L1Md_F2 LINE L1 -1090 4793 206 5 969 489 17 0 0 chr15 50365967 50366025 -53128949 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 969 413 124 26 58 chr15 50366025 50366179 -53128795 + (CAGAGA)n Simple_repeat Simple_repeat 2 150 0 5 969 454 269 42 159 chr15 50366418 50366657 -53128317 + B4A SINE B4 82 292 0 5 969 22 35 0 0 chr15 50367147 50367176 -53127798 + AT_rich Low_complexity Low_complexity 1 29 0 5 969 411 56 0 0 chr15 50368587 50368641 -53126333 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 969 291 257 0 0 chr15 50370229 50370330 -53124644 + (CAT)n Simple_repeat Simple_repeat 2 102 0 5 969 193 143 54 0 chr15 50370430 50370486 -53124488 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 5 969 25 0 0 0 chr15 50371642 50371667 -53123307 + AT_rich Low_complexity Low_complexity 1 25 0 5 969 353 276 0 57 chr15 50371681 50371804 -53123170 + GA-rich Low_complexity Low_complexity 2 117 0 5 969 30 0 0 0 chr15 50371853 50371883 -53123091 + AT_rich Low_complexity Low_complexity 1 30 0 5 969 712 326 33 37 chr15 50372440 50372895 -53122079 - Charlie2a DNA MER1_type -35 2826 2374 5 969 207 88 0 0 chr15 50373455 50373489 -53121485 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 969 227 319 14 0 chr15 50373986 50374058 -53120916 - Charlie2a DNA MER1_type -1276 1585 1513 5 969 1643 244 90 36 chr15 50374113 50374644 -53120330 + RLTR20B2 LTR ERVK 1 560 0 5 969 24 0 0 0 chr15 50374747 50374771 -53120203 + AT_rich Low_complexity Low_complexity 1 24 0 5 969 523 376 116 11 chr15 50374875 50375400 -53119574 - Charlie2a DNA MER1_type -2238 623 44 5 969 22 35 0 0 chr15 50375400 50375429 -53119545 + AT_rich Low_complexity Low_complexity 1 29 0 5 969 199 267 0 77 chr15 50376338 50376403 -53118571 + MIR SINE MIR 7 66 -196 5 969 1125 313 65 57 chr15 50377258 50377889 -53117085 + Lx8 LINE L1 6643 7278 -195 5 969 21 0 0 0 chr15 50378052 50378073 -53116901 + GC_rich Low_complexity Low_complexity 1 21 0 5 969 1742 151 87 46 chr15 50378275 50378624 -53116350 - RLTR31B_Mm LTR ERVK 0 557 100 5 969 561 52 0 0 chr15 50378624 50378701 -53116273 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 0 5 969 1742 150 89 47 chr15 50378701 50378782 -53116192 - RLTR31B_Mm LTR ERVK -458 99 2 5 969 2430 218 40 45 chr15 50378784 50379509 -53115465 - RMER3D-int LTR ERVK -2 2840 2120 5 969 728 168 39 111 chr15 50379509 50379690 -53115284 - RLTR31B_Mm LTR ERVK -389 168 1 5 969 3165 184 115 43 chr15 50379746 50380427 -53114547 - RMER3D-int LTR ERVK -747 2095 1371 5 969 243 0 0 0 chr15 50380427 50380454 -53114520 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 969 3165 193 65 33 chr15 50380454 50380803 -53114171 - RMER3D-int LTR ERVK -1472 1370 1005 5 969 377 236 95 90 chr15 50380827 50380949 -53114025 - RMER3D-int LTR ERVK -2641 201 67 5 969 426 20 0 0 chr15 50380949 50381000 -53113974 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 5 969 377 236 95 90 chr15 50381000 50381077 -53113897 - RMER3D-int LTR ERVK -2776 66 1 5 969 2099 212 52 72 chr15 50381079 50381731 -53113243 - RLTR31B_Mm LTR ERVK -2 559 1 5 969 1692 21 0 0 chr15 50381816 50382008 -53112966 + B2_Mm1a SINE B2 2 193 0 5 969 456 221 43 17 chr15 50382032 50382147 -53112827 + B1_Mur1 SINE Alu 26 143 -6 5 969 3732 164 40 25 chr15 50383119 50383801 -53111173 + RLTR17 LTR ERVK 1 692 0 5 969 21 0 0 0 chr15 50383846 50383867 -53111107 + AT_rich Low_complexity Low_complexity 1 21 0 5 969 2540 208 50 22 chr15 50383958 50384514 -53110460 - Lx5 LINE L1 -2 7048 6477 5 969 327 146 0 0 chr15 50384526 50384581 -53110393 + (TAGA)n Simple_repeat Simple_repeat 1 55 0 5 969 3224 184 54 11 chr15 50384718 50385472 -53109502 + L1_Mur3 LINE L1 2879 3665 -2215 5 969 3063 186 32 11 chr15 50385470 50386116 -53108858 + L1_Mur3 LINE L1 4999 5658 -222 5 969 207 176 0 0 chr15 50386168 50386202 -53108772 + CT-rich Low_complexity Low_complexity 4 37 0 5 969 707 227 87 0 chr15 50386206 50386378 -53108596 - RMER1C Other Other -18 1324 1138 5 969 762 159 39 26 chr15 50386394 50386549 -53108425 + B2_Mm2 SINE B2 5 161 -34 5 969 309 51 0 0 chr15 50386549 50386588 -53108386 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 5 969 38066 35 4 6 chr15 50386599 50392595 -53102379 - L1Md_T LINE L1 0 6582 606 5 969 1691 270 35 39 chr15 50392577 50393067 -53101907 - RMER1C Other Other -195 1147 660 5 969 230 239 36 27 chr15 50393069 50393181 -53101793 + (TA)n Simple_repeat Simple_repeat 1 113 0 5 969 1309 250 77 70 chr15 50393415 50394038 -53100936 - Lx9 LINE L1 -1687 5957 5292 5 969 733 336 51 37 chr15 50394036 50394490 -53100484 + Lx9 LINE L1 6813 7272 -372 5 969 375 309 16 8 chr15 50395492 50395616 -53099358 - MER5C1 DNA MER1_type -113 150 26 5 969 396 350 62 29 chr15 50395634 50395875 -53099099 + LTR16E1 LTR ERVL 290 538 0 5 969 616 204 6 64 chr15 50397017 50397174 -53097800 - Lx5 LINE L1 0 7050 6903 5 969 251 373 100 17 chr15 50397207 50397496 -53097478 + LTR78 LTR ERV1 991 1303 -1 5 969 4839 57 0 0 chr15 50398376 50398978 -53095996 - L1Md_F2 LINE L1 -12 6570 5969 5 969 292 281 104 0 chr15 50399124 50399220 -53095754 - MER58A DNA MER1_type -67 157 52 5 969 24 0 0 0 chr15 50399431 50399455 -53095519 + AT_rich Low_complexity Low_complexity 1 24 0 5 969 1022 312 41 11 chr15 50399727 50400093 -53094881 - MTEa LTR MaLR -2 377 1 5 969 244 0 56 0 chr15 50400641 50400677 -53094297 + (TTA)n Simple_repeat Simple_repeat 1 38 0 5 969 780 337 30 68 chr15 50401407 50401904 -53093070 + Lx8 LINE L1 6995 7472 -1 5 969 805 186 0 7 chr15 50402321 50402462 -53092512 - B1_Mur4 SINE Alu -10 140 1 5 969 584 256 78 83 chr15 50402560 50402752 -53092222 + B3A SINE B2 6 196 -2 5 969 1213 40 0 13 chr15 50402759 50402909 -53092065 + B1_Mus1 SINE Alu 1 148 0 5 969 429 228 68 45 chr15 50402938 50403071 -53091903 + RSINE1 SINE B4 2 137 -28 5 969 374 329 67 74 chr15 50403260 50403529 -53091445 + B4A SINE B4 24 290 -2 5 969 180 0 0 0 chr15 50403667 50403687 -53091287 + (TTA)n Simple_repeat Simple_repeat 2 21 0 5 969 36509 31 4 8 chr15 50404206 50409486 -53085488 + L1Md_T LINE L1 334 5586 -297 5 969 8098 35 19 0 chr15 50409487 50410463 -53084511 + L1Md_T LINE L1 5588 6582 0 5 969 25 31 0 0 chr15 50410570 50410602 -53084372 + AT_rich Low_complexity Low_complexity 1 32 0 5 969 32 43 0 0 chr15 50410776 50410822 -53084152 + AT_rich Low_complexity Low_complexity 1 46 0 5 969 23 33 0 0 chr15 50411220 50411250 -53083724 + AT_rich Low_complexity Low_complexity 1 30 0 5 969 2581 163 169 12 chr15 50411445 50412041 -53082933 + RMER6C LTR ERVK 1 690 0 5 969 290 296 90 63 chr15 50412084 50412324 -53082650 + RLTR20D LTR ERVK 1 257 -306 5 969 30 27 0 0 chr15 50413593 50413630 -53081344 + AT_rich Low_complexity Low_complexity 1 37 0 5 969 239 241 0 0 chr15 50413704 50413749 -53081225 + T-rich Low_complexity Low_complexity 14 58 0 5 969 1000 95 7 7 chr15 50413749 50413897 -53081077 - B1_Mus1 SINE Alu 0 148 1 5 969 239 241 0 0 chr15 50413897 50413909 -53081065 + T-rich Low_complexity Low_complexity 2 13 0 5 969 4015 142 31 38 chr15 50414237 50414675 -53080299 + Lx4A LINE L1 6332 6768 -290 5 969 327 25 0 0 chr15 50414675 50414715 -53080259 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 969 4015 142 31 38 chr15 50414715 50415007 -53079967 + Lx4A LINE L1 6769 7057 -1 5 969 1711 119 0 0 chr15 50415048 50415309 -53079665 + L1_Mus4 LINE L1 6376 6636 0 5 969 870 55 148 0 chr15 50417375 50417503 -53077471 + B1_Mus2 SINE Alu 1 147 0 5 969 212 115 0 55 chr15 50417505 50417560 -53077414 + A-rich Low_complexity Low_complexity 1 52 0 5 969 4519 226 68 43 chr15 50418438 50419705 -53075269 + Lx7 LINE L1 6390 7688 -8 5 969 3484 69 39 2 chr15 50420839 50421304 -53073670 + RLTR45 LTR ERVK 1 482 0 5 969 480 86 0 0 chr15 50421625 50421695 -53073279 + (TA)n Simple_repeat Simple_repeat 1 70 0 5 969 35 63 0 0 chr15 50422363 50422426 -53072548 + AT_rich Low_complexity Low_complexity 1 63 0 5 969 403 333 29 0 chr15 50422648 50422786 -53072188 - B4 SINE B4 -127 165 24 5 969 318 381 89 41 chr15 50423066 50423337 -53071637 + ORR1E LTR MaLR 32 315 -44 5 969 1761 58 109 4 chr15 50423846 50424122 -53070852 + BGLII LTR ERVK 1 305 -116 5 969 249 33 0 0 chr15 50425070 50425100 -53069874 + (A)n Simple_repeat Simple_repeat 1 30 0 5 969 26 30 0 0 chr15 50425382 50425415 -53069559 + AT_rich Low_complexity Low_complexity 1 33 0 5 969 225 314 74 25 chr15 50425642 50425763 -53069211 - MER53 DNA hAT 0 193 67 5 969 3552 72 19 4 chr15 50426172 50426647 -53068327 + RLTR45 LTR ERVK 1 482 0 5 969 4374 66 107 19 chr15 50426647 50427283 -53067691 + RLTR45-int LTR ERVK 1 692 -6552 5 969 1132 51 0 0 chr15 50427583 50427721 -53067253 + RLTR45-int LTR ERVK 681 818 -6426 5 969 4496 47 101 1 chr15 50428532 50429428 -53065546 + RLTR45-int LTR ERVK 1329 2314 -4930 5 969 11142 2 0 0 chr15 50429430 50430670 -53064304 - L1Md_A LINE L1 -127 5756 4517 5 969 7603 2 0 0 chr15 50430670 50431510 -53063464 + L1Md_A LINE L1 5743 6582 0 5 969 7023 50 1 8 chr15 50431517 50432430 -53062544 + RLTR45-int LTR ERVK 2306 3212 -4032 5 969 3161 68 38 14 chr15 50432411 50432857 -53062117 + RLTR45-int LTR ERVK 3385 3841 -3403 5 969 1350 100 29 53 chr15 50432856 50433099 -53061875 + RLTR45-int LTR ERVK 3750 3986 -3258 5 969 7935 55 2 8 chr15 50433092 50434106 -53060868 + RLTR45-int LTR ERVK 5065 6072 -1172 5 969 2032 97 13 3 chr15 50434128 50434427 -53060547 + RLTR13B1 LTR ERVK 207 508 -385 5 969 7640 50 1 2 chr15 50434427 50435340 -53059634 + RLTR45-int LTR ERVK 6333 7244 0 5 969 3517 78 19 4 chr15 50435340 50435815 -53059159 + RLTR45 LTR ERVK 1 482 0 5 969 374 333 28 0 chr15 50435817 50435925 -53059049 - RSINE1 SINE B4 -32 133 23 5 969 243 350 24 24 chr15 50438095 50438218 -53056756 - MIRm SINE MIR -101 175 53 5 969 255 333 47 7 chr15 50440267 50440415 -53054559 - L1MEd LINE L1 -5963 156 3 6 969 335 202 83 0 chr15 50441314 50441398 -53053576 - L2a LINE L2 0 3426 3336 6 969 369 281 75 18 chr15 50441698 50441873 -53053101 - MIRc SINE MIR -59 209 28 6 969 342 0 0 0 chr15 50442135 50442173 -53052801 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 969 2521 199 90 10 chr15 50443589 50444187 -53050787 + L1Md_F LINE L1 463 1108 -5411 6 969 291 161 0 0 chr15 50444155 50444217 -53050757 + L1VL1 LINE L1 1108 1169 -5469 6 969 5484 55 3 0 chr15 50444217 50444939 -53050035 + L1Md_F2 LINE L1 4863 5586 -297 6 969 7977 47 5 1 chr15 50444939 50445931 -53049043 + L1Md_F2 LINE L1 5587 6582 0 6 969 7044 91 12 1 chr15 50445932 50447091 -53047883 + L1VL1 LINE L1 1176 2348 -3535 6 969 386 36 18 0 chr15 50447089 50447144 -53047830 - L1_Mur2 LINE L1 -2177 3700 3645 6 969 6565 81 36 3 chr15 50447146 50447510 -53047464 + L1_Mus2 LINE L1 5529 5902 -664 6 969 246 62 0 0 chr15 50447510 50447542 -53047432 + (CCCTAA)n Simple_repeat Simple_repeat 4 35 0 6 969 6565 75 37 3 chr15 50447542 50448183 -53046791 + L1_Mus2 LINE L1 5903 6564 -2 6 969 301 349 89 28 chr15 50449513 50449693 -53045281 + LTR16E2 LTR ERVL 274 464 -104 6 969 279 307 7 50 chr15 50450344 50450472 -53044502 + MIRc SINE MIR 2 121 -87 6 969 976 221 65 0 chr15 50450877 50451094 -53043880 + RMER1B Other Other 46 276 -790 6 969 519 208 41 8 chr15 50451111 50451232 -53043742 - RMER1A Other Other -876 154 30 6 969 2770 209 131 3 chr15 50451282 50452202 -53042772 + RMER1B Other Other 49 1054 -12 6 969 34 0 0 0 chr15 50452577 50452611 -53042363 + AT_rich Low_complexity Low_complexity 1 34 0 6 969 1597 240 25 14 chr15 50452898 50453266 -53041708 - MTD LTR MaLR -2 417 46 6 969 1047 330 92 36 chr15 50453567 50454085 -53040889 - MLT1F LTR MaLR -3 545 3 6 969 412 318 9 0 chr15 50454412 50454519 -53040455 + B1F1 SINE Alu 28 135 -14 6 969 24 0 0 0 chr15 50456230 50456254 -53038720 + AT_rich Low_complexity Low_complexity 1 24 0 6 969 198 339 0 0 chr15 50456631 50456693 -53038281 - MIR SINE MIR -65 143 82 6 969 2068 95 3 69 chr15 50456719 50457068 -53037906 + IAPLTR1a_Mm LTR ERVK 1 326 -11 6 121 55924 8 1 5 chr15 50457069 50463572 -53031402 + IAPEz-int LTR ERVK 1 6481 0 6 970 2068 95 3 69 chr15 50463572 50463921 -53031053 + IAPLTR1a_Mm LTR ERVK 1 326 -11 6 970 298 188 49 35 chr15 50464009 50464152 -53030822 + (TA)n Simple_repeat Simple_repeat 2 146 0 6 970 21 0 0 0 chr15 50466286 50466307 -53028667 + AT_rich Low_complexity Low_complexity 1 21 0 6 970 826 279 82 62 chr15 50466392 50466943 -53028031 - L1MC1 LINE L1 -134 6199 5638 6 970 495 0 0 0 chr15 50466994 50467049 -53027925 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 6 970 683 240 160 56 chr15 50467050 50467319 -53027655 + MTEb LTR MaLR 66 362 -17 6 970 303 333 32 24 chr15 50467612 50467735 -53027239 + L2a LINE L2 3280 3403 -23 6 970 258 105 0 0 chr15 50467979 50468017 -53026957 + (TC)n Simple_repeat Simple_repeat 1 38 0 6 970 189 0 0 0 chr15 50468025 50468046 -53026928 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 970 509 292 102 40 chr15 50468204 50468731 -53026243 - L1M4 LINE L1 -1192 4954 4395 6 970 573 64 0 0 chr15 50469106 50469184 -53025790 + (GA)n Simple_repeat Simple_repeat 1 78 0 6 970 36346 39 6 3 chr15 50469361 50475580 -53019394 - L1Md_T LINE L1 0 6585 250 6 970 363 296 51 17 chr15 50475585 50475760 -53019214 - L1MD LINE L1 -2192 3954 3774 6 970 325 125 11 43 chr15 50475994 50476086 -53018888 + T-rich Low_complexity Low_complexity 2 90 0 6 970 231 311 156 0 chr15 50476279 50476369 -53018605 + MTEa LTR MaLR 2 105 -274 6 970 467 304 66 66 chr15 50476417 50476648 -53018326 + MT2A LTR ERVL 213 443 -90 6 970 1335 248 96 69 chr15 50476648 50477055 -53017919 + MTC LTR MaLR 4 421 0 6 970 204 135 0 0 chr15 50478053 50478090 -53016884 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 970 213 39 0 0 chr15 50478092 50478118 -53016856 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 970 396 0 0 0 chr15 50478118 50478161 -53016813 + (GA)n Simple_repeat Simple_repeat 1 44 0 6 970 224 302 110 9 chr15 50478524 50478675 -53016299 - MIR SINE MIR -101 167 1 6 970 300 305 177 0 chr15 50479419 50479560 -53015414 + HAL1-3A_ME LINE L1 2274 2439 -419 6 970 451 258 0 24 chr15 50479599 50479766 -53015208 + G-rich Low_complexity Low_complexity 3 165 0 6 970 425 0 55 0 chr15 50480179 50480234 -53014740 + (CTATT)n Simple_repeat Simple_repeat 4 61 0 6 970 557 339 110 26 chr15 50480585 50480894 -53014080 - MLT1A0 LTR MaLR -8 357 23 6 970 210 143 0 0 chr15 50482214 50482249 -53012725 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 970 21 0 0 0 chr15 50483731 50483752 -53011222 + AT_rich Low_complexity Low_complexity 1 21 0 6 970 202 200 44 0 chr15 50484028 50484073 -53010901 + L3 LINE CR1 1392 1438 -3051 6 970 288 0 0 0 chr15 50484136 50484168 -53010806 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 970 189 74 0 0 chr15 50484215 50484242 -53010732 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 970 666 226 14 7 chr15 50484441 50484579 -53010395 - B1_Mus1 SINE Alu -2 146 8 6 970 404 328 59 96 chr15 50485313 50485616 -53009358 + MER102b DNA MER1_type 1 292 -49 6 970 206 245 0 19 chr15 50485983 50486037 -53008937 + GA-rich Low_complexity Low_complexity 2 54 0 6 970 265 242 32 0 chr15 50487321 50487383 -53007591 - AmnSINE1 SINE SINE -4 571 508 6 970 268 149 0 97 chr15 50487418 50487480 -53007494 - MIR SINE MIR -105 157 103 6 970 186 167 0 0 chr15 50489950 50489986 -53004988 + T-rich Low_complexity Low_complexity 1 36 0 6 970 21 0 0 0 chr15 50490362 50490383 -53004591 + AT_rich Low_complexity Low_complexity 1 21 0 6 970 198 103 0 0 chr15 50490512 50490541 -53004433 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 970 270 0 0 0 chr15 50493805 50493835 -53001139 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6 970 207 179 0 0 chr15 50493882 50493921 -53001053 + A-rich Low_complexity Low_complexity 2 40 0 6 970 280 308 2 81 chr15 50494031 50494152 -53000822 + MLT1B LTR MaLR 255 390 0 6 970 25 0 0 0 chr15 50497392 50497417 -52997557 + AT_rich Low_complexity Low_complexity 1 25 0 6 970 208 301 0 24 chr15 50501085 50501170 -52993804 - L2a LINE L2 0 3426 3344 1 970 180 0 0 0 chr15 50501393 50501413 -52993561 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 2 970 201 328 47 0 chr15 50502399 50502463 -52992511 - MIR3 SINE MIR -138 70 4 3 970 531 325 123 0 chr15 50503375 50503618 -52991356 + B4A SINE B4 2 274 -18 4 970 336 24 0 0 chr15 50503689 50503730 -52991244 + (CAA)n Simple_repeat Simple_repeat 1 41 0 5 970 297 0 0 0 chr15 50503730 50503763 -52991211 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 970 236 347 136 52 chr15 50503925 50504080 -52990894 - MIRb SINE MIR -65 203 36 7 970 259 228 14 0 chr15 50504967 50505115 -52989859 + (CA)n Simple_repeat Simple_repeat 1 150 0 8 970 848 163 0 6 chr15 50505115 50505288 -52989686 + (CATATA)n Simple_repeat Simple_repeat 4 175 0 9 970 188 185 0 18 chr15 50505303 50505358 -52989616 + (CATA)n Simple_repeat Simple_repeat 2 55 0 1 970 309 109 0 0 chr15 50505496 50505542 -52989432 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 970 378 57 0 0 chr15 50506163 50506216 -52988758 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 970 517 216 79 36 chr15 50508446 50508585 -52986389 - B1_Mur2 SINE Alu -1 148 4 1 970 210 250 0 0 chr15 50508904 50508964 -52986010 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 970 32 26 0 0 chr15 50509031 50509070 -52985904 + AT_rich Low_complexity Low_complexity 1 39 0 1 970 369 0 0 0 chr15 50509401 50509442 -52985532 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 970 22 0 0 0 chr15 50510612 50510634 -52984340 + AT_rich Low_complexity Low_complexity 1 22 0 1 970 1137 62 7 0 chr15 50510656 50510801 -52984173 - B1_Mm SINE Alu 0 147 2 1 970 1652 77 36 0 chr15 50510817 50511037 -52983937 - L1_Mus1 LINE L1 -1 6566 6339 1 970 21 36 0 0 chr15 50511531 50511559 -52983415 + AT_rich Low_complexity Low_complexity 1 28 0 2 970 298 295 44 18 chr15 50512305 50512419 -52982555 + PB1D10 SINE Alu 1 117 0 2 970 522 0 0 0 chr15 50512697 50512755 -52982219 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 970 999 305 76 58 chr15 50512828 50513000 -52981974 + Lx7 LINE L1 6829 6983 -713 2 970 3379 54 7 16 chr15 50513000 50513432 -52981542 - L1_Mus1 LINE L1 0 6567 6140 2 970 999 305 76 58 chr15 50513432 50513705 -52981269 + Lx7 LINE L1 6984 7282 -414 2 970 231 36 0 0 chr15 50513786 50513814 -52981160 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 2 970 531 90 0 0 chr15 50513885 50513963 -52981011 + (TG)n Simple_repeat Simple_repeat 1 78 0 2 970 331 331 70 6 chr15 50514327 50514485 -52980489 - MARNA DNA Mariner -410 176 9 2 970 849 155 0 0 chr15 50518612 50518760 -52976214 + GA-rich Low_complexity Low_complexity 1 148 0 2 970 226 114 45 0 chr15 50519424 50519468 -52975506 + T-rich Low_complexity Low_complexity 2 47 0 2 970 351 0 0 0 chr15 50519468 50519507 -52975467 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 970 288 172 0 0 chr15 50520486 50520544 -52974430 + T-rich Low_complexity Low_complexity 1 58 0 3 970 206 219 0 0 chr15 50520609 50520650 -52974324 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 970 459 35 0 0 chr15 50521200 50521257 -52973717 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 3 970 218 189 0 0 chr15 50521332 50521369 -52973605 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 970 429 70 0 0 chr15 50522455 50522512 -52972462 + (TTTG)n Simple_repeat Simple_repeat 2 58 0 3 970 23 0 0 0 chr15 50525311 50525334 -52969640 + AT_rich Low_complexity Low_complexity 1 23 0 3 970 207 0 0 0 chr15 50527820 50527843 -52967131 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 970 25 0 0 0 chr15 50528956 50528981 -52965993 + AT_rich Low_complexity Low_complexity 1 25 0 3 970 228 67 0 0 chr15 50531010 50531040 -52963934 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 970 183 100 0 0 chr15 50531194 50531224 -52963750 + (TAAAAA)n Simple_repeat Simple_repeat 6 35 0 4 970 250 130 0 0 chr15 50531513 50531559 -52963415 - RMER1C Other Other 0 1342 1297 4 970 435 250 143 0 chr15 50531747 50531859 -52963115 - B1F SINE Alu -21 128 1 4 970 252 224 0 0 chr15 50532562 50532629 -52962345 + GA-rich Low_complexity Low_complexity 6 72 0 4 970 676 61 10 10 chr15 50532643 50532742 -52962232 + (GGAA)n Simple_repeat Simple_repeat 2 100 0 4 970 341 293 138 57 chr15 50532742 50532865 -52962109 - B1_Mur1 SINE Alu -16 133 1 4 970 568 267 9 0 chr15 50533173 50533289 -52961685 - RSINE1 SINE B4 -1 164 48 4 970 24 0 0 0 chr15 50534079 50534103 -52960871 + AT_rich Low_complexity Low_complexity 1 24 0 4 970 2203 89 3 21 chr15 50534437 50534771 -52960203 + L1Md_F2 LINE L1 6243 6570 -12 4 970 351 242 58 36 chr15 50535008 50535145 -52959829 + L1MB2 LINE L1 5746 5885 -286 4 970 444 289 55 49 chr15 50535200 50535364 -52959610 - RSINE1 SINE B4 0 165 1 5 970 31 44 0 0 chr15 50536645 50536690 -52958284 + AT_rich Low_complexity Low_complexity 1 45 0 5 970 233 29 29 0 chr15 50536693 50536727 -52958247 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 5 970 509 279 91 38 chr15 50536913 50537099 -52957875 + B3A SINE B2 2 197 -1 5 970 23 33 0 0 chr15 50537640 50537670 -52957304 + AT_rich Low_complexity Low_complexity 1 30 0 5 970 279 0 0 0 chr15 50538030 50538061 -52956913 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 970 455 339 15 0 chr15 50538144 50538274 -52956700 + B1F2 SINE Alu 10 141 -8 5 970 355 316 0 0 chr15 50538274 50538372 -52956602 + (CA)n Simple_repeat Simple_repeat 1 98 0 5 970 217 295 26 18 chr15 50539164 50539278 -52955696 + (TAGA)n Simple_repeat Simple_repeat 3 117 0 5 970 182 272 72 88 chr15 50539283 50539408 -52955566 + L2c LINE L2 3218 3340 -47 5 970 264 91 0 0 chr15 50541425 50541469 -52953505 + (A)n Simple_repeat Simple_repeat 1 44 0 6 970 712 302 58 8 chr15 50543359 50543616 -52951358 - B4 SINE B4 -18 274 5 6 970 21 0 0 0 chr15 50543888 50543909 -52951065 + AT_rich Low_complexity Low_complexity 1 21 0 6 970 215 359 0 0 chr15 50544253 50544317 -52950657 + ID4_ SINE ID 20 83 0 6 970 25 0 0 0 chr15 50545365 50545390 -52949584 + AT_rich Low_complexity Low_complexity 1 25 0 6 970 1134 68 7 0 chr15 50545974 50546121 -52948853 + B1_Mus1 SINE Alu 1 148 0 6 970 234 0 0 0 chr15 50546121 50546147 -52948827 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 970 815 286 91 70 chr15 50547850 50548024 -52946950 + Lx8 LINE L1 7054 7242 -231 6 970 1122 68 7 0 chr15 50548024 50548171 -52946803 + B1_Mus1 SINE Alu 1 148 0 6 970 815 286 91 70 chr15 50548171 50548368 -52946606 + Lx8 LINE L1 7243 7433 -40 6 970 441 0 0 0 chr15 50550204 50550253 -52944721 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 6 970 216 200 0 0 chr15 50550446 50550496 -52944478 + (TA)n Simple_repeat Simple_repeat 2 51 0 7 970 25 0 0 0 chr15 50551195 50551220 -52943754 + AT_rich Low_complexity Low_complexity 1 25 0 7 970 396 0 0 0 chr15 50551695 50551739 -52943235 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 970 477 0 0 0 chr15 50551739 50551791 -52943183 + (TA)n Simple_repeat Simple_repeat 2 54 0 7 970 831 112 0 0 chr15 50552474 50552599 -52942375 + (GAAA)n Simple_repeat Simple_repeat 2 126 0 7 970 244 368 117 56 chr15 50553667 50553863 -52941111 - B4 SINE B4 -4 288 81 7 970 299 352 0 22 chr15 50553906 50553996 -52940978 - B4 SINE B4 -199 93 6 7 970 646 337 0 43 chr15 50555656 50555867 -52939107 + B3 SINE B2 6 207 -9 7 970 267 103 0 0 chr15 50557146 50557185 -52937789 + (T)n Simple_repeat Simple_repeat 1 39 0 7 970 254 279 0 81 chr15 50557384 50557470 -52937504 + ID4 SINE ID 1 79 -4 7 970 396 0 0 0 chr15 50557797 50557841 -52937133 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 970 202 390 78 0 chr15 50558639 50558716 -52936258 + L2b LINE L2 3289 3371 -4 8 970 290 292 85 0 chr15 50559074 50559180 -52935794 + MIRb SINE MIR 51 165 -103 8 970 464 312 14 28 chr15 50560245 50560390 -52934584 + MLT1E LTR MaLR 454 596 -57 8 970 249 163 0 0 chr15 50560391 50560440 -52934534 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 970 843 174 17 9 chr15 50560446 50560677 -52934297 + (CATA)n Simple_repeat Simple_repeat 1 232 0 8 970 376 221 0 11 chr15 50560677 50560726 -52934248 + (TA)n Simple_repeat Simple_repeat 2 50 0 8 970 225 0 0 0 chr15 50560726 50560751 -52934223 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 970 376 221 0 11 chr15 50560751 50560788 -52934186 + (TA)n Simple_repeat Simple_repeat 2 37 0 8 970 189 0 0 0 chr15 50561407 50561428 -52933546 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 970 346 184 35 0 chr15 50563454 50563541 -52931433 + Lx9 LINE L1 7532 7621 -23 8 970 1164 48 0 0 chr15 50563623 50563770 -52931204 + B1_Mm SINE Alu 1 147 0 9 970 244 45 0 62 chr15 50563773 50563821 -52931153 + (CAAAAA)n Simple_repeat Simple_repeat 2 46 0 9 970 696 191 15 0 chr15 50563996 50564132 -52930842 + B1_Mus1 SINE Alu 1 138 -10 9 970 307 275 62 0 chr15 50564157 50564237 -52930737 + HAL1-3A_ME LINE L1 2284 2368 -490 9 970 267 192 0 0 chr15 50565339 50565412 -52929562 + GA-rich Low_complexity Low_complexity 2 74 0 9 970 276 210 46 46 chr15 50565439 50565504 -52929470 - B4A SINE B4 -14 278 214 9 970 1194 312 5 31 chr15 50565528 50565918 -52929056 - Lx5 LINE L1 -15 7035 6656 9 970 668 312 40 18 chr15 50565918 50566143 -52928831 - B4A SINE B4 -62 230 1 9 970 266 244 21 43 chr15 50566644 50566738 -52928236 + (TATATG)n Simple_repeat Simple_repeat 1 92 0 9 970 28 48 0 0 chr15 50567335 50567377 -52927597 + AT_rich Low_complexity Low_complexity 1 42 0 9 970 395 313 0 25 chr15 50569742 50569860 -52925114 + PB1D10 SINE Alu 3 117 0 1 970 26 30 0 0 chr15 50571687 50571720 -52923254 + AT_rich Low_complexity Low_complexity 1 33 0 1 970 236 263 0 0 chr15 50571859 50571916 -52923058 + A-rich Low_complexity Low_complexity 3 59 0 1 970 477 0 0 0 chr15 50571954 50572007 -52922967 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 970 423 0 0 0 chr15 50572007 50572053 -52922921 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 970 22 70 0 0 chr15 50574752 50574795 -52920179 + AT_rich Low_complexity Low_complexity 1 43 0 1 970 531 0 0 0 chr15 50574975 50575034 -52919940 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 1 970 230 0 111 0 chr15 50581014 50581059 -52913915 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 1 970 228 169 67 17 chr15 50583137 50583197 -52911777 + RLTR40 LTR ERVK 15 77 -740 1 970 231 61 0 0 chr15 50583946 50583979 -52910995 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 970 645 333 81 15 chr15 50585159 50585430 -52909544 + B4A SINE B4 4 292 0 1 970 312 340 27 74 chr15 50585545 50585694 -52909280 + B3A SINE B2 41 182 -16 1 970 23 54 0 0 chr15 50586766 50586803 -52908171 + AT_rich Low_complexity Low_complexity 1 37 0 1 970 22 0 0 0 chr15 50586899 50586921 -52908053 + AT_rich Low_complexity Low_complexity 1 22 0 1 970 344 385 0 0 chr15 50587656 50587773 -52907201 + ID_B1 SINE B4 91 207 -17 1 970 515 325 31 16 chr15 50588383 50588577 -52906397 + MER20 DNA MER1_type 7 203 -16 1 970 338 341 60 60 chr15 50588842 50589060 -52905914 - B4A SINE B4 -74 218 1 1 970 29 0 0 0 chr15 50589342 50589371 -52905603 + AT_rich Low_complexity Low_complexity 1 29 0 1 970 395 251 214 39 chr15 50589508 50589686 -52905288 - B3 SINE B2 0 216 8 1 970 31 58 0 0 chr15 50590359 50590411 -52904563 + AT_rich Low_complexity Low_complexity 1 52 0 1 970 234 267 130 28 chr15 50590867 50590975 -52903999 + Arthur1 DNA Tip100 3423 3541 -406 1 970 360 276 159 40 chr15 50591015 50591213 -52903761 + Arthur1 DNA Tip100 3639 3862 -85 1 970 1173 48 0 7 chr15 50591213 50591360 -52903614 + B1_Mm SINE Alu 2 147 0 1 970 360 276 159 40 chr15 50591360 50591437 -52903537 + Arthur1 DNA Tip100 3863 3946 -1 1 970 26 74 0 0 chr15 50591834 50591888 -52903086 + AT_rich Low_complexity Low_complexity 1 54 0 1 970 369 0 0 0 chr15 50593199 50593240 -52901734 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 970 23 54 0 0 chr15 50593581 50593618 -52901356 + AT_rich Low_complexity Low_complexity 1 37 0 1 970 183 156 0 0 chr15 50593742 50593774 -52901200 + T-rich Low_complexity Low_complexity 1 32 0 1 971 572 346 0 61 chr15 50593931 50594128 -52900846 + B3A SINE B2 6 190 -8 1 971 23 0 0 0 chr15 50594658 50594681 -52900293 + AT_rich Low_complexity Low_complexity 1 23 0 1 971 23 33 0 0 chr15 50595618 50595648 -52899326 + AT_rich Low_complexity Low_complexity 1 30 0 1 971 267 278 11 43 chr15 50596377 50596471 -52898503 + GA-rich Low_complexity Low_complexity 3 93 0 1 971 649 314 27 70 chr15 50596873 50597174 -52897800 - Charlie2a DNA MER1_type -2389 472 185 1 971 232 216 78 0 chr15 50597501 50597552 -52897422 + RMER12 LTR ERVK 749 803 -519 1 971 554 311 41 29 chr15 50598865 50599074 -52895900 - B3A SINE B2 -1 215 4 1 971 221 293 29 57 chr15 50599200 50599305 -52895669 - RSINE1 SINE B4 -39 126 25 1 971 256 315 11 11 chr15 50600869 50600959 -52894015 + GA-rich Low_complexity Low_complexity 1 90 0 1 971 360 0 0 0 chr15 50601444 50601484 -52893490 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 971 224 337 35 0 chr15 50603227 50603313 -52891661 + PB1D9 SINE Alu 1 89 -31 1 971 421 238 68 6 chr15 50603340 50603501 -52891473 - L1M5 LINE L1 -741 5438 5268 1 971 218 136 0 22 chr15 50603578 50603623 -52891351 + A-rich Low_complexity Low_complexity 2 45 0 1 971 314 225 14 14 chr15 50603929 50604073 -52890901 + GA-rich Low_complexity Low_complexity 1 144 0 1 971 241 312 45 30 chr15 50604875 50605007 -52889967 + L1MA6 LINE L1 5880 6013 -287 1 971 297 156 0 38 chr15 50606542 50606622 -52888352 + (TA)n Simple_repeat Simple_repeat 1 77 0 1 971 25 0 0 0 chr15 50607385 50607410 -52887564 + AT_rich Low_complexity Low_complexity 1 25 0 1 971 2897 233 38 79 chr15 50608593 50609519 -52885455 + Lx7 LINE L1 6809 7696 0 1 971 196 362 17 33 chr15 50610408 50610528 -52884446 - MIRc SINE MIR -104 164 47 1 971 21 0 0 0 chr15 50611972 50611993 -52882981 + AT_rich Low_complexity Low_complexity 1 21 0 1 971 205 186 0 0 chr15 50612244 50612287 -52882687 + T-rich Low_complexity Low_complexity 2 44 0 1 971 405 259 94 40 chr15 50613582 50613808 -52881166 + MIRb SINE MIR 19 261 -1 1 971 245 377 57 25 chr15 50615016 50615174 -52879800 + MIRb SINE MIR 53 215 -53 1 971 217 51 0 49 chr15 50615580 50615621 -52879353 + (TTA)n Simple_repeat Simple_repeat 1 39 0 1 971 472 288 8 8 chr15 50615631 50615757 -52879217 - ID_B1 SINE B4 -5 219 94 1 971 297 68 0 0 chr15 50616689 50616733 -52878241 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 971 23 54 0 0 chr15 50617168 50617205 -52877769 + AT_rich Low_complexity Low_complexity 1 37 0 1 971 207 0 0 0 chr15 50617280 50617303 -52877671 + (T)n Simple_repeat Simple_repeat 1 23 0 1 971 995 41 0 0 chr15 50617303 50617426 -52877548 - B1_Mm SINE Alu 0 147 25 1 971 432 0 0 0 chr15 50617472 50617520 -52877454 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 971 361 0 41 0 chr15 50617520 50617569 -52877405 + (TCC)n Simple_repeat Simple_repeat 2 52 0 1 971 216 97 0 0 chr15 50618502 50618533 -52876441 + (A)n Simple_repeat Simple_repeat 1 31 0 1 971 304 350 42 21 chr15 50619516 50619659 -52875315 + MIRc SINE MIR 91 236 -32 1 971 239 349 29 58 chr15 50619657 50619864 -52875110 + L3 LINE CR1 4289 4489 0 1 971 246 62 0 0 chr15 50622680 50622712 -52872262 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 1 971 261 109 0 0 chr15 50623435 50623481 -52871493 + (CAGA)n Simple_repeat Simple_repeat 2 47 0 1 971 21 36 0 0 chr15 50626473 50626501 -52868473 + AT_rich Low_complexity Low_complexity 1 28 0 1 971 290 49 32 32 chr15 50627110 50627173 -52867801 + (CAAAA)n Simple_repeat Simple_repeat 2 64 0 1 971 1293 265 50 0 chr15 50627524 50627845 -52867129 + MTD LTR MaLR 26 362 -57 1 971 208 147 0 0 chr15 50627847 50627881 -52867093 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1 971 941 211 124 10 chr15 50628932 50629133 -52865841 + Lx6 LINE L1 6777 7000 -460 1 971 508 360 34 67 chr15 50631482 50631678 -52863296 + B4 SINE B4 1 203 -89 1 971 336 24 0 0 chr15 50631678 50631719 -52863255 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1 971 508 360 34 67 chr15 50631719 50631820 -52863154 + B4 SINE B4 204 288 -4 1 971 219 103 0 0 chr15 50631886 50631925 -52863049 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 1 971 294 143 0 0 chr15 50631990 50632039 -52862935 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 971 450 0 0 0 chr15 50633874 50633924 -52861050 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 971 189 0 0 0 chr15 50635690 50635711 -52859263 + (A)n Simple_repeat Simple_repeat 1 21 0 1 971 240 325 60 0 chr15 50636372 50636455 -52858519 + LTR79 LTR ERVL 427 514 -13 1 971 525 76 0 0 chr15 50636836 50636915 -52858059 + (GA)n Simple_repeat Simple_repeat 1 79 0 1 971 737 267 94 33 chr15 50637004 50637279 -52857695 - B4A SINE B4 0 292 1 1 971 320 342 48 66 chr15 50637705 50637871 -52857103 + RSINE1 SINE B4 3 165 0 1 971 219 69 0 0 chr15 50638176 50638205 -52856769 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 971 305 246 39 96 chr15 50639729 50639958 -52855016 + Lx9 LINE L1 7409 7624 -20 1 971 536 262 6 72 chr15 50640376 50640557 -52854417 - Lx7 LINE L1 0 7696 7528 1 971 654 124 16 8 chr15 50640700 50640801 -52854173 + (GA)n Simple_repeat Simple_repeat 2 104 0 1 971 1148 107 11 0 chr15 50640801 50640979 -52853995 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 1 971 654 124 16 8 chr15 50640979 50640999 -52853975 + (GA)n Simple_repeat Simple_repeat 1 20 0 1 971 233 29 29 0 chr15 50641455 50641489 -52853485 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 971 376 399 10 47 chr15 50641733 50641925 -52853049 - B3A SINE B2 -5 193 9 1 971 741 23 0 0 chr15 50645475 50645562 -52849412 + (GA)n Simple_repeat Simple_repeat 2 88 0 1 971 612 282 0 27 chr15 50646057 50646203 -52848771 - B1F SINE Alu -7 142 1 1 971 239 329 102 4 chr15 50646689 50646876 -52848098 + MIR SINE MIR 24 227 -41 1 971 270 0 0 0 chr15 50648420 50648450 -52846524 + (A)n Simple_repeat Simple_repeat 1 30 0 1 971 34 0 0 0 chr15 50650753 50650787 -52844187 + AT_rich Low_complexity Low_complexity 1 34 0 1 971 237 33 0 0 chr15 50651010 50651040 -52843934 + (T)n Simple_repeat Simple_repeat 1 30 0 1 971 288 0 0 0 chr15 50653166 50653198 -52841776 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 971 498 17 0 0 chr15 50654452 50654511 -52840463 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 971 2112 190 32 7 chr15 50655567 50655976 -52838998 - MTC LTR MaLR 0 421 3 1 971 789 119 0 0 chr15 50656861 50656979 -52837995 + ORR1D1 LTR MaLR 5 122 -252 1 971 288 53 0 0 chr15 50656996 50657034 -52837940 + (TCTG)n Simple_repeat Simple_repeat 1 38 0 1 971 608 66 0 0 chr15 50657034 50657110 -52837864 + B1_Mur4 SINE Alu 69 144 -6 1 971 214 329 53 0 chr15 50657153 50657229 -52837745 - ID4_ SINE ID -3 80 1 1 971 345 350 46 62 chr15 50657953 50658212 -52836762 - L1MEg LINE L1 -4894 1190 936 1 971 1001 240 5 0 chr15 50658228 50658436 -52836538 + B3 SINE B2 1 209 -7 1 971 32 43 0 0 chr15 50658436 50658482 -52836492 + AT_rich Low_complexity Low_complexity 1 46 0 2 971 222 269 0 0 chr15 50660537 50660589 -52834385 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 971 391 314 7 82 chr15 50661100 50661246 -52833728 + B1F SINE Alu 15 149 0 2 971 360 0 0 0 chr15 50661621 50661661 -52833313 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 971 341 102 17 0 chr15 50661752 50661811 -52833163 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 971 291 286 24 0 chr15 50664269 50664353 -52830621 + PB1D10 SINE Alu 32 117 0 2 971 184 186 23 23 chr15 50664844 50664888 -52830086 + MIR SINE MIR 88 131 -131 2 971 285 151 0 0 chr15 50665024 50665077 -52829897 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 971 570 124 0 0 chr15 50665078 50665167 -52829807 + (TA)n Simple_repeat Simple_repeat 2 90 0 2 971 21 36 0 0 chr15 50666628 50666656 -52828318 + AT_rich Low_complexity Low_complexity 1 28 0 2 971 250 319 58 92 chr15 50667113 50667320 -52827654 + MER3 DNA MER1_type 9 208 -1 2 971 219 164 55 0 chr15 50667833 50667888 -52827086 + A-rich Low_complexity Low_complexity 3 60 0 2 971 261 0 0 0 chr15 50669216 50669245 -52825729 + (TC)n Simple_repeat Simple_repeat 1 29 0 2 971 216 0 0 0 chr15 50669245 50669268 -52825706 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 971 636 14 0 0 chr15 50669268 50669340 -52825634 + (GA)n Simple_repeat Simple_repeat 2 74 0 2 971 262 298 24 18 chr15 50669521 50669624 -52825350 + ID4 SINE ID 3 103 -49 2 971 405 255 134 43 chr15 50669799 50669963 -52825011 + B3A SINE B2 4 182 -16 2 971 229 174 29 0 chr15 50669964 50670033 -52824941 + (CA)n Simple_repeat Simple_repeat 1 71 0 2 971 284 186 23 35 chr15 50670057 50670230 -52824744 + (CA)n Simple_repeat Simple_repeat 1 171 0 2 971 421 139 39 39 chr15 50670263 50670443 -52824531 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 971 270 289 21 49 chr15 50670744 50670886 -52824088 + GA-rich Low_complexity Low_complexity 3 140 0 2 971 406 316 92 63 chr15 50670889 50671173 -52823801 + B4A SINE B4 1 292 0 2 971 385 142 51 19 chr15 50671182 50671340 -52823634 + (CA)n Simple_repeat Simple_repeat 1 163 0 2 971 208 172 45 11 chr15 50671365 50671453 -52823521 + (CA)n Simple_repeat Simple_repeat 1 91 0 2 971 25 75 0 0 chr15 50671481 50671534 -52823440 + AT_rich Low_complexity Low_complexity 1 53 0 2 971 496 310 55 47 chr15 50672180 50672437 -52822537 + MIR SINE MIR 4 262 0 2 971 203 210 0 73 chr15 50674429 50674544 -52820430 + T-rich Low_complexity Low_complexity 1 106 0 2 971 242 143 20 0 chr15 50675186 50675235 -52819739 + (TGGA)n Simple_repeat Simple_repeat 4 53 0 2 971 25 31 0 0 chr15 50676762 50676794 -52818180 + AT_rich Low_complexity Low_complexity 1 32 0 2 971 22 0 0 0 chr15 50678857 50678879 -52816095 + AT_rich Low_complexity Low_complexity 1 22 0 2 971 261 0 0 0 chr15 50681932 50681961 -52813013 + (A)n Simple_repeat Simple_repeat 1 29 0 2 971 1203 68 0 0 chr15 50682409 50682556 -52812418 + B1_Mus1 SINE Alu 1 147 -1 2 971 233 301 0 24 chr15 50683067 50683152 -52811822 + (CATA)n Simple_repeat Simple_repeat 4 86 0 2 971 441 0 0 0 chr15 50683467 50683516 -52811458 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 971 231 191 0 0 chr15 50685152 50685199 -52809775 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 971 619 23 11 0 chr15 50685901 50685988 -52808986 - L1Md_F2 LINE L1 0 6582 6495 2 971 460 331 17 9 chr15 50686919 50687086 -52807888 + B3 SINE B2 20 188 -10 2 971 274 301 65 65 chr15 50687457 50687610 -52807364 - MER103 DNA DNA -4 162 10 2 971 354 138 0 0 chr15 50688157 50688215 -52806759 + (TA)n Simple_repeat Simple_repeat 2 59 0 2 971 331 336 114 8 chr15 50688251 50688374 -52806600 - RSINE1 SINE B4 -18 147 12 2 971 27 73 0 0 chr15 50688400 50688455 -52806519 + AT_rich Low_complexity Low_complexity 1 55 0 2 971 909 185 0 0 chr15 50688970 50689148 -52805826 + GA-rich Low_complexity Low_complexity 2 179 0 2 971 237 151 0 0 chr15 50689145 50689198 -52805776 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 2 971 672 321 77 33 chr15 50691070 50691344 -52803630 + B4A SINE B4 4 289 -3 2 971 331 335 110 48 chr15 50691588 50691942 -52803032 + L1ME3A LINE L1 5751 6126 -47 2 971 222 350 50 14 chr15 50692462 50692601 -52802373 - MIRb SINE MIR -12 256 113 2 971 242 236 115 103 chr15 50692758 50692923 -52802051 + Charlie22a DNA MER1_type 21 187 -304 2 971 232 356 141 32 chr15 50693161 50693501 -52801473 + Tigger10 DNA Tigger 1432 1808 -35 2 971 1131 68 14 0 chr15 50693928 50694074 -52800900 + B1_Mus1 SINE Alu 1 148 0 2 971 558 0 0 0 chr15 50696185 50696247 -52798727 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 971 294 29 0 0 chr15 50696247 50696281 -52798693 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 971 218 268 124 132 chr15 50696554 50696683 -52798291 - ID_B1 SINE B4 -7 217 90 2 971 257 352 24 32 chr15 50697370 50697496 -52797478 - LFSINE_Vert SINE SINE -293 166 42 2 971 189 0 0 0 chr15 50697859 50697880 -52797094 + (T)n Simple_repeat Simple_repeat 1 21 0 2 971 1124 62 0 0 chr15 50697882 50698026 -52796948 - B1_Mus2 SINE Alu 0 147 4 2 971 261 0 0 0 chr15 50698220 50698249 -52796725 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 971 966 187 113 0 chr15 50699029 50699232 -52795742 + URR1A DNA MER1_type 1 226 0 2 971 184 349 163 7 chr15 50699330 50699483 -52795491 - MIRc SINE MIR -1 267 91 2 971 212 343 73 18 chr15 50700103 50700213 -52794761 + B1_Mur1 SINE Alu 17 132 -17 2 971 27 0 0 0 chr15 50700326 50700353 -52794621 + AT_rich Low_complexity Low_complexity 1 27 0 2 971 228 135 0 0 chr15 50701604 50701641 -52793333 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 2 971 351 0 0 0 chr15 50701941 50701980 -52792994 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 971 333 0 0 0 chr15 50701980 50702016 -52792958 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 971 279 345 26 0 chr15 50702203 50702316 -52792658 + PB1D10 SINE Alu 1 116 -1 2 971 200 278 97 58 chr15 50702364 50702467 -52792507 + MIRb SINE MIR 18 124 -144 2 971 372 94 0 0 chr15 50703683 50703736 -52791238 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 971 27 62 0 0 chr15 50707115 50707163 -52787811 + AT_rich Low_complexity Low_complexity 1 48 0 2 971 252 0 0 0 chr15 50707623 50707651 -52787323 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 971 366 23 0 0 chr15 50711181 50711224 -52783750 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 971 231 114 0 0 chr15 50711648 50711683 -52783291 + (T)n Simple_repeat Simple_repeat 1 35 0 2 971 22 0 0 0 chr15 50714600 50714622 -52780352 + AT_rich Low_complexity Low_complexity 1 22 0 2 971 408 71 0 0 chr15 50716039 50716095 -52778879 + (GA)n Simple_repeat Simple_repeat 2 57 0 2 971 33 56 0 0 chr15 50717684 50717738 -52777236 + AT_rich Low_complexity Low_complexity 1 54 0 2 971 252 0 0 0 chr15 50717958 50717986 -52776988 + (TAA)n Simple_repeat Simple_repeat 3 30 0 2 971 234 0 0 0 chr15 50720981 50721007 -52773967 + (T)n Simple_repeat Simple_repeat 1 26 0 2 971 23 68 0 0 chr15 50721095 50721139 -52773835 + GC_rich Low_complexity Low_complexity 1 44 0 2 971 208 206 0 0 chr15 50721286 50721320 -52773654 + C-rich Low_complexity Low_complexity 1 34 0 2 971 180 0 0 0 chr15 50721417 50721437 -52773537 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 971 203 213 15 62 chr15 50721691 50721821 -52773153 + (CCCCG)n Simple_repeat Simple_repeat 1 124 0 2 971 224 157 20 0 chr15 50721696 50721747 -52773227 + (CCG)n Simple_repeat Simple_repeat 2 53 0 2 971 526 136 42 0 chr15 50722779 50722897 -52772077 + (TA)n Simple_repeat Simple_repeat 1 123 0 2 971 22 0 0 0 chr15 50724194 50724216 -52770758 + AT_rich Low_complexity Low_complexity 1 22 0 2 972 220 193 17 34 chr15 50726899 50726958 -52768016 + CT-rich Low_complexity Low_complexity 2 59 0 2 972 1326 93 9 0 chr15 50727863 50728208 -52766766 + (GA)n Simple_repeat Simple_repeat 1 348 0 2 972 317 335 63 58 chr15 50728233 50728423 -52766551 + LTR33 LTR ERVL 325 515 0 2 972 205 283 19 19 chr15 50728487 50728541 -52766433 - L2a LINE L2 -12 3414 3361 2 972 275 150 17 0 chr15 50728893 50728953 -52766021 + GA-rich Low_complexity Low_complexity 1 61 0 2 972 1081 231 0 124 chr15 50729477 50729857 -52765117 - Lx7 LINE L1 0 7696 7364 2 972 582 15 0 0 chr15 50729870 50729937 -52765037 + (CATATA)n Simple_repeat Simple_repeat 5 71 0 2 972 21 36 0 0 chr15 50729971 50729999 -52764975 + AT_rich Low_complexity Low_complexity 1 28 0 2 972 447 106 0 0 chr15 50730087 50730153 -52764821 + (T)n Simple_repeat Simple_repeat 1 66 0 2 972 411 168 40 48 chr15 50730153 50730278 -52764696 - RMER17C LTR ERVK -135 275 152 2 972 3611 259 43 26 chr15 50730306 50731362 -52763612 - Lx7 LINE L1 -410 7286 6214 2 972 444 104 0 0 chr15 50731369 50731436 -52763538 + (TA)n Simple_repeat Simple_repeat 1 67 0 2 972 279 0 0 0 chr15 50731436 50731466 -52763508 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 972 878 71 0 31 chr15 50731508 50731638 -52763336 - B1_Mm SINE Alu -1 146 21 2 972 2818 201 84 8 chr15 50731817 50732524 -52762450 - RLTR25B LTR ERVK -174 854 3 2 972 310 216 86 76 chr15 50732547 50732652 -52762322 - Lx7 LINE L1 -1652 6044 5939 2 972 21 0 0 0 chr15 50733108 50733129 -52761845 + AT_rich Low_complexity Low_complexity 1 21 0 2 972 189 107 0 0 chr15 50733323 50733351 -52761623 + (T)n Simple_repeat Simple_repeat 1 28 0 2 972 434 272 162 34 chr15 50733724 50733903 -52761071 - B3 SINE B2 -12 204 3 2 972 402 100 0 0 chr15 50734692 50734752 -52760222 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 972 263 353 66 31 chr15 50736262 50736555 -52758419 + L2a LINE L2 2797 3112 -314 2 972 21 0 0 0 chr15 50736886 50736907 -52758067 + AT_rich Low_complexity Low_complexity 1 21 0 2 972 180 296 0 18 chr15 50737014 50737069 -52757905 - MIRm SINE MIR -3 273 220 2 972 287 317 56 28 chr15 50739074 50739181 -52755793 - PB1D10 SINE Alu -7 110 1 3 972 480 288 24 8 chr15 50739181 50739257 -52755717 - ID SINE ID -143 81 4 3 972 1428 24 0 6 chr15 50739329 50739494 -52755480 - L1Md_T LINE L1 -363 6219 6056 3 972 2616 35 3 0 chr15 50739494 50739811 -52755163 + L1Md_T LINE L1 6262 6579 -3 3 972 216 0 0 0 chr15 50739907 50739931 -52755043 + (T)n Simple_repeat Simple_repeat 1 24 0 3 972 1172 56 0 7 chr15 50739932 50740077 -52754897 - B1_Mus2 SINE Alu -2 145 2 3 972 414 57 0 0 chr15 50740177 50740230 -52754744 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 972 199 385 51 8 chr15 50741083 50741201 -52753773 - MIR3 SINE MIR -13 195 73 3 972 1003 64 171 6 chr15 50741306 50741464 -52753510 - B2_Mm1a SINE B2 -6 187 4 3 972 1736 225 36 40 chr15 50742570 50742991 -52751983 + MTD LTR MaLR 1 419 0 3 972 438 75 0 0 chr15 50743457 50743524 -52751450 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 972 543 296 14 7 chr15 50746328 50746474 -52748500 - RSINE1 SINE B4 -17 148 2 3 972 3915 222 69 69 chr15 50746604 50747907 -52747067 + L1_Mur3 LINE L1 1 1138 -6574 3 972 2054 224 31 105 chr15 50747934 50748579 -52746395 + Lx7 LINE L1 7095 7691 -5 3 972 509 296 34 27 chr15 50748615 50748761 -52746213 + B3A SINE B2 41 187 -11 3 972 411 309 216 0 chr15 50748787 50748981 -52745993 + MLT1D LTR MaLR 6 241 -264 3 972 440 14 58 0 chr15 50749486 50749555 -52745419 + (TA)n Simple_repeat Simple_repeat 1 73 0 3 972 507 140 45 26 chr15 50749716 50749870 -52745104 + CT-rich Low_complexity Low_complexity 6 162 0 3 972 21 57 0 0 chr15 50749900 50749935 -52745039 + AT_rich Low_complexity Low_complexity 1 35 0 3 972 645 79 47 0 chr15 50750296 50750423 -52744551 + (TCTA)n Simple_repeat Simple_repeat 4 136 0 3 972 546 333 28 55 chr15 50751379 50751668 -52743306 - L3 LINE CR1 -1411 3078 2798 3 972 180 0 0 0 chr15 50751833 50751853 -52743121 + (TTCC)n Simple_repeat Simple_repeat 1 20 0 3 972 1125 123 0 0 chr15 50751853 50752032 -52742942 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 3 972 221 146 21 0 chr15 50752708 50752756 -52742218 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 972 343 246 34 60 chr15 50753964 50754081 -52740893 + B3A SINE B2 82 195 -3 3 972 182 62 31 0 chr15 50754696 50754728 -52740246 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 3 972 216 362 60 0 chr15 50756251 50756367 -52738607 + L2a LINE L2 3293 3415 -11 3 972 25 31 0 0 chr15 50759395 50759427 -52735547 + AT_rich Low_complexity Low_complexity 1 32 0 3 972 312 317 0 19 chr15 50761753 50761859 -52733115 + CT-rich Low_complexity Low_complexity 1 104 0 3 972 189 0 0 0 chr15 50761946 50761967 -52733007 + (GGGGA)n Simple_repeat Simple_repeat 1 21 0 3 972 1703 21 0 0 chr15 50762222 50762414 -52732560 - B2_Mm1a SINE B2 0 193 2 3 972 808 330 4 40 chr15 50762631 50762906 -52732068 + B4A SINE B4 1 265 -27 3 972 21 0 0 0 chr15 50762999 50763020 -52731954 + AT_rich Low_complexity Low_complexity 1 21 0 3 972 228 292 43 65 chr15 50763037 50763176 -52731798 - L1ME3A LINE L1 -13 6160 6025 3 972 1432 60 6 0 chr15 50763267 50763450 -52731524 - B2_Mm1a SINE B2 -8 185 2 3 972 477 0 0 0 chr15 50764337 50764390 -52730584 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 972 306 0 0 0 chr15 50764390 50764423 -52730551 + (GA)n Simple_repeat Simple_repeat 1 34 0 3 972 793 333 136 89 chr15 50765727 50766433 -52728541 - MER21B LTR ERV1 -113 750 12 3 972 584 348 79 15 chr15 50766586 50766952 -52728022 + MER82 DNA MER2_type 161 587 -66 3 972 464 337 29 10 chr15 50767287 50767493 -52727481 + MIRb SINE MIR 1 217 -51 3 972 945 27 0 0 chr15 50768148 50768260 -52726714 + (TTC)n Simple_repeat Simple_repeat 2 113 0 3 972 1070 109 0 0 chr15 50768309 50768456 -52726518 - B1_Mm SINE Alu 0 147 1 3 972 225 351 39 0 chr15 50770562 50770639 -52724335 + ID2 SINE ID 2 81 -2 3 972 576 367 39 21 chr15 50771718 50772052 -52722922 + L2 LINE L2 2166 2505 -914 3 972 22 0 0 0 chr15 50773669 50773691 -52721283 + AT_rich Low_complexity Low_complexity 1 22 0 3 972 285 216 0 13 chr15 50773865 50773940 -52721034 + (TA)n Simple_repeat Simple_repeat 1 74 0 3 972 519 148 0 0 chr15 50774616 50774704 -52720270 + (TTCTC)n Simple_repeat Simple_repeat 3 90 0 3 972 555 299 101 22 chr15 50774800 50775067 -52719907 - B4 SINE B4 0 292 5 3 972 705 316 19 30 chr15 50775219 50775490 -52719484 - Charlie18a DNA MER1_type -64 278 11 3 972 261 0 0 0 chr15 50777172 50777201 -52717773 + (TC)n Simple_repeat Simple_repeat 2 30 0 3 972 297 0 0 0 chr15 50777201 50777233 -52717741 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 972 225 0 0 0 chr15 50777547 50777572 -52717402 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 972 29 47 0 0 chr15 50778188 50778231 -52716743 + AT_rich Low_complexity Low_complexity 1 43 0 3 972 893 327 59 11 chr15 50778458 50778814 -52716160 - MTE2a LTR MaLR -4 375 3 3 972 492 309 67 5 chr15 50778894 50779089 -52715885 + ID_B1 SINE B4 4 210 -14 3 972 22 35 0 0 chr15 50779126 50779155 -52715819 + AT_rich Low_complexity Low_complexity 1 29 0 3 972 341 343 50 43 chr15 50779232 50779372 -52715602 + MLT1E1 LTR MaLR 414 554 -100 3 972 386 260 175 26 chr15 50779824 50779978 -52714996 + MLT2B4 LTR ERVL 21 197 -359 3 972 485 262 8 16 chr15 50780056 50780184 -52714790 + ID_B1 SINE B4 98 224 0 3 972 21 36 0 0 chr15 50780193 50780221 -52714753 + AT_rich Low_complexity Low_complexity 1 28 0 3 972 387 0 0 0 chr15 50781652 50781695 -52713279 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 972 681 271 64 50 chr15 50781708 50781745 -52713229 + B3 SINE B2 1 35 -181 3 972 7199 71 23 5 chr15 50781745 50782705 -52712269 + L1Md_F2 LINE L1 5604 6580 -2 3 972 681 271 64 50 chr15 50782705 50782869 -52712105 + B3 SINE B2 36 205 -11 3 972 22 0 0 0 chr15 50782870 50782892 -52712082 + AT_rich Low_complexity Low_complexity 1 22 0 3 972 236 167 18 18 chr15 50783139 50783194 -52711780 + T-rich Low_complexity Low_complexity 3 57 0 3 972 1065 256 170 46 chr15 50783472 50783971 -52711003 + RMER4B LTR ERVK 15 575 -10 3 972 493 145 144 7 chr15 50784680 50784819 -52710155 - Lx9 LINE L1 -2 7642 7485 3 972 1969 203 46 11 chr15 50784813 50785266 -52709708 + Lx9 LINE L1 6870 7338 -306 3 972 262 262 106 53 chr15 50785409 50785522 -52709452 - MLT1A1 LTR MaLR -2 406 288 3 972 1200 316 24 21 chr15 50785707 50786082 -52708892 - MTEb LTR MaLR -3 376 1 3 972 1258 309 86 30 chr15 50786082 50786557 -52708417 - MTEb-int LTR MaLR -29 1551 1049 3 972 198 0 0 0 chr15 50786845 50786867 -52708107 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 972 327 49 0 0 chr15 50787096 50787137 -52707837 + (A)n Simple_repeat Simple_repeat 1 41 0 3 972 309 212 26 0 chr15 50787354 50787467 -52707507 + GA-rich Low_complexity Low_complexity 2 117 0 3 972 230 245 0 0 chr15 50788183 50788236 -52706738 - PB1D10 SINE Alu -25 92 40 3 972 28 0 0 0 chr15 50788303 50788331 -52706643 + AT_rich Low_complexity Low_complexity 1 28 0 3 972 386 199 109 93 chr15 50789502 50789685 -52705289 - Lx9 LINE L1 -15 7629 7444 3 972 1102 270 111 38 chr15 50789697 50790174 -52704800 - Lx9 LINE L1 -675 6969 6458 3 972 24 0 0 0 chr15 50790195 50790219 -52704755 + AT_rich Low_complexity Low_complexity 1 24 0 3 972 677 362 143 17 chr15 50790497 50791022 -52703952 - MLT1G3 LTR MaLR -1 594 4 3 972 365 344 103 13 chr15 50791370 50791603 -52703371 + L1MC1 LINE L1 6018 6271 -62 3 972 214 360 52 26 chr15 50791645 50791722 -52703252 + ID4_ SINE ID 3 81 -2 3 972 215 345 153 9 chr15 50792519 50792630 -52702344 + L2c LINE L2 2330 2456 -963 3 972 235 391 105 19 chr15 50792861 50793174 -52701800 + L4 LINE RTE 722 1061 -968 3 972 273 189 44 11 chr15 50794767 50794858 -52700116 + (TA)n Simple_repeat Simple_repeat 2 95 0 3 972 228 111 0 0 chr15 50794859 50794895 -52700079 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 972 404 350 94 16 chr15 50795142 50795505 -52699469 + L2c LINE L2 2991 3381 -6 3 972 867 301 54 15 chr15 50796899 50797159 -52697815 + B4 SINE B4 15 284 -8 3 972 509 30 0 15 chr15 50797171 50797239 -52697735 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 972 220 269 15 15 chr15 50797898 50797966 -52697008 - MIRc SINE MIR -33 235 168 3 972 250 327 79 48 chr15 50798461 50798689 -52696285 + MIRb SINE MIR 34 268 0 3 972 483 331 55 32 chr15 50800196 50800508 -52694466 - Lx8 LINE L1 -156 7317 6999 3 972 304 262 55 18 chr15 50802626 50802735 -52692239 + RMER12 LTR ERVK 738 850 -472 3 972 232 245 0 19 chr15 50803844 50803898 -52691076 + Lx7 LINE L1 5609 5661 -2035 3 972 193 225 128 70 chr15 50804103 50804189 -52690785 + L3 LINE CR1 2001 2091 -2398 3 972 196 313 15 0 chr15 50804784 50804851 -52690123 - MIR SINE MIR -114 148 81 3 972 779 126 163 0 chr15 50805049 50805184 -52689790 - URR1A DNA MER1_type -68 158 2 3 972 267 79 0 0 chr15 50808101 50808139 -52686835 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 972 207 0 0 0 chr15 50808139 50808161 -52686813 + (GA)n Simple_repeat Simple_repeat 2 24 0 3 972 37 23 0 0 chr15 50808247 50808291 -52686683 + AT_rich Low_complexity Low_complexity 1 44 0 3 972 462 342 136 3 chr15 50808305 50808622 -52686352 - Lx9 LINE L1 -190 7454 7096 3 972 685 238 210 0 chr15 50808688 50808969 -52686005 - Lx9 LINE L1 -7 7637 7298 3 972 3418 116 84 9 chr15 50809743 50810499 -52684475 - Lx3B LINE L1 -881 6092 5302 3 972 5103 120 27 60 chr15 50810499 50811400 -52683574 + Lx3C LINE L1 6099 6969 -7 3 972 206 62 31 0 chr15 50811411 50811443 -52683531 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 4 972 23 0 0 0 chr15 50814583 50814606 -52680368 + AT_rich Low_complexity Low_complexity 1 23 0 4 972 258 32 0 0 chr15 50815443 50815474 -52679500 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 972 1249 318 150 19 chr15 50815605 50816252 -52678722 - Lx8 LINE L1 -31 7442 6711 4 972 270 232 0 0 chr15 50816261 50816317 -52678657 + MER3 DNA MER1_type 147 202 -7 4 972 442 353 122 67 chr15 50817961 50818304 -52676670 + MTEa LTR MaLR 4 365 -14 4 972 2373 171 113 72 chr15 50818313 50818976 -52675998 - RMER6C LTR ERVK 0 690 1 4 972 359 312 129 36 chr15 50819075 50819250 -52675724 + B3 SINE B2 3 198 -18 4 972 369 0 0 0 chr15 50819250 50819291 -52675683 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 972 359 312 129 36 chr15 50819291 50819308 -52675666 + B3 SINE B2 199 213 -3 4 972 497 340 53 29 chr15 50820228 50820437 -52674537 + B3 SINE B2 1 214 -2 4 972 22 0 0 0 chr15 50821121 50821143 -52673831 + AT_rich Low_complexity Low_complexity 1 22 0 4 972 363 248 56 0 chr15 50821990 50822115 -52672859 + MER121 Unknown Unknown 88 219 -193 4 972 270 0 0 0 chr15 50822972 50823002 -52671972 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 972 387 0 0 0 chr15 50823002 50823044 -52671930 + (TC)n Simple_repeat Simple_repeat 1 43 0 4 972 387 337 156 16 chr15 50823954 50824210 -52670764 + LTR16A1 LTR ERVL 19 310 -146 4 972 210 207 49 49 chr15 50824277 50824338 -52670636 + MIR SINE MIR 85 145 -117 4 972 519 352 31 25 chr15 50824340 50824503 -52670471 + RSINE1 SINE B4 2 165 0 4 972 23 0 0 0 chr15 50824523 50824546 -52670428 + AT_rich Low_complexity Low_complexity 1 23 0 4 972 213 39 0 0 chr15 50825443 50825469 -52669505 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 4 972 1812 142 49 31 chr15 50825598 50825947 -52669027 + RLTR15 LTR ERVK 1 355 -4 4 972 355 278 32 65 chr15 50827304 50827458 -52667516 - B4A SINE B4 -143 149 1 4 972 447 152 0 0 chr15 50828150 50828229 -52666745 + GA-rich Low_complexity Low_complexity 2 80 0 4 972 414 0 0 0 chr15 50828421 50828467 -52666507 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 972 22 0 0 0 chr15 50828550 50828572 -52666402 + AT_rich Low_complexity Low_complexity 1 22 0 4 972 396 0 0 0 chr15 50829702 50829746 -52665228 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 972 287 309 50 35 chr15 50830916 50831057 -52663917 - MER115 DNA Tip100 -35 658 516 4 972 267 93 0 0 chr15 50831229 50831272 -52663702 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 972 250 296 0 27 chr15 50832652 50832725 -52662249 - MIRb SINE MIR -63 205 135 4 972 534 312 108 45 chr15 50833132 50833586 -52661388 - L1ME2 LINE L1 -10 6152 5667 4 972 777 302 49 16 chr15 50833960 50834266 -52660708 - MER33 DNA MER1_type -1 323 8 4 972 675 0 0 0 chr15 50834526 50834601 -52660373 + (TA)n Simple_repeat Simple_repeat 2 76 0 4 972 860 309 140 27 chr15 50834714 50835626 -52659348 - L1M4 LINE L1 -1347 4799 3785 4 972 429 320 145 122 chr15 50835813 50836069 -52658905 + MTD-int LTR MaLR 1088 1395 -185 4 972 396 110 14 14 chr15 50836069 50836143 -52658831 - Lx2A LINE L1 -11 6997 6924 4 972 544 276 86 46 chr15 50836143 50836367 -52658607 + MTD-int LTR MaLR 1112 1258 0 4 972 1434 275 20 37 chr15 50836367 50836769 -52658205 + MTD LTR MaLR 25 419 0 4 972 2733 42 3 0 chr15 50836821 50837157 -52657817 - L1Md_T LINE L1 0 6582 6246 4 972 2065 60 6 67 chr15 50837157 50837460 -52657514 + L1Md_T LINE L1 5992 6245 -337 4 972 407 364 47 19 chr15 50837536 50837888 -52657086 - L1M4 LINE L1 -2711 3432 3074 4 972 487 372 61 19 chr15 50838188 50838563 -52656411 - L1MC LINE L1 -1119 5027 4637 4 972 249 229 80 62 chr15 50838602 50838714 -52656260 - RMER1C Other Other -3 1339 1226 4 972 566 188 20 0 chr15 50838726 50838827 -52656147 + MTC LTR MaLR 3 105 -316 4 972 1888 176 68 3 chr15 50838947 50839317 -52655657 - ORR1B1 LTR MaLR 0 394 1 4 972 232 176 145 26 chr15 50839383 50839459 -52655515 - L1MD LINE L1 -2450 5545 5461 4 972 223 356 20 0 chr15 50840916 50841017 -52653957 + MIRc SINE MIR 114 216 -52 4 972 1744 242 70 15 chr15 50841876 50842346 -52652628 - Lx9 LINE L1 -6 7638 7143 4 972 328 274 70 33 chr15 50842783 50843054 -52651920 + L1M4c LINE L1 1694 2087 -4546 4 972 257 353 34 109 chr15 50843105 50843280 -52651694 + B4A SINE B4 117 278 -14 4 972 450 36 0 0 chr15 50843316 50843372 -52651602 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 972 387 0 0 0 chr15 50843372 50843414 -52651560 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 972 345 366 0 0 chr15 50843613 50843736 -52651238 - RSINE1 SINE B4 -42 123 1 4 972 276 130 0 0 chr15 50843889 50843935 -52651039 + (GAAA)n Simple_repeat Simple_repeat 2 47 0 4 972 22 0 0 0 chr15 50844282 50844304 -52650670 + AT_rich Low_complexity Low_complexity 1 22 0 4 972 669 190 50 21 chr15 50844474 50844614 -52650360 - B1_Mur3 SINE Alu -5 144 1 4 972 28 29 0 0 chr15 50844615 50844650 -52650324 + AT_rich Low_complexity Low_complexity 1 35 0 4 972 291 300 133 48 chr15 50844765 50845308 -52649666 + L1M4c LINE L1 4504 5092 -1445 4 972 2390 226 65 5 chr15 50845316 50845885 -52649089 + Lx9 LINE L1 6584 7186 -458 4 972 323 299 100 36 chr15 50846197 50846515 -52648459 + L1M4c LINE L1 5491 5838 -732 4 972 367 299 15 7 chr15 50846753 50846888 -52648086 + L1M4c LINE L1 6073 6208 -2178 4 972 588 277 14 0 chr15 50846894 50847035 -52647939 + B1_Mur3 SINE Alu 1 143 -6 4 972 22 0 0 0 chr15 50847043 50847065 -52647909 + AT_rich Low_complexity Low_complexity 1 22 0 4 972 287 259 37 0 chr15 50847837 50847918 -52647056 - MER33 DNA MER1_type -231 93 10 4 972 478 294 81 0 chr15 50849408 50849544 -52645430 + RSINE1 SINE B4 5 151 -14 4 972 180 125 0 0 chr15 50849574 50849606 -52645368 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 4 972 21 71 0 0 chr15 50851077 50851119 -52643855 + AT_rich Low_complexity Low_complexity 1 42 0 4 972 30 0 0 0 chr15 50852704 50852734 -52642240 + AT_rich Low_complexity Low_complexity 1 30 0 4 972 483 73 0 0 chr15 50852735 50852803 -52642171 + (GA)n Simple_repeat Simple_repeat 1 68 0 4 972 286 257 10 29 chr15 50853301 50853405 -52641569 + GA-rich Low_complexity Low_complexity 2 103 0 4 973 225 0 0 0 chr15 50856869 50856894 -52638080 + (TC)n Simple_repeat Simple_repeat 2 26 0 4 973 459 0 0 0 chr15 50856894 50856944 -52638030 + (TA)n Simple_repeat Simple_repeat 2 52 0 4 973 350 74 19 0 chr15 50857773 50857827 -52637147 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 973 351 127 0 0 chr15 50857827 50857890 -52637084 + (GA)n Simple_repeat Simple_repeat 2 64 0 4 973 581 285 112 12 chr15 50857901 50858224 -52636750 + L1M2 LINE L1 5341 5695 -605 4 973 360 0 0 0 chr15 50858426 50858466 -52636508 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 973 1716 254 99 50 chr15 50858525 50859150 -52635824 - Lx9 LINE L1 -266 7378 6723 4 973 732 276 39 7 chr15 50859156 50859365 -52635609 - B3A SINE B2 -1 215 1 4 973 260 204 0 0 chr15 50859405 50859454 -52635520 + L1M2 LINE L1 5729 5777 -514 4 973 235 401 49 14 chr15 50860019 50860163 -52634811 - MER58A DNA MER1_type -72 152 4 4 973 254 297 149 51 chr15 50860684 50860790 -52634184 + Lx9 LINE L1 7222 7349 -295 4 973 752 0 11 0 chr15 50860790 50860878 -52634096 + (GA)n Simple_repeat Simple_repeat 1 89 0 4 973 254 297 149 51 chr15 50860878 50860966 -52634008 + Lx9 LINE L1 7350 7434 -210 4 973 657 56 0 0 chr15 50861121 50861211 -52633763 + (TCTA)n Simple_repeat Simple_repeat 4 93 0 4 973 492 81 0 0 chr15 50861216 50861290 -52633684 + (TA)n Simple_repeat Simple_repeat 1 74 0 4 973 304 314 101 8 chr15 50862238 50862357 -52632617 - MTE2b LTR MaLR -85 294 165 4 973 41212 5 0 0 chr15 50862368 50868941 -52626033 - L1Md_A LINE L1 0 6582 10 4 973 481 242 8 239 chr15 50868941 50869175 -52625799 - MTE2b LTR MaLR -199 180 1 4 973 791 216 112 198 chr15 50869688 50869875 -52625099 - ORR1D1 LTR MaLR 0 374 183 4 973 204 40 0 0 chr15 50869875 50869900 -52625074 + (CAGAGA)n Simple_repeat Simple_repeat 4 28 0 4 973 522 0 0 0 chr15 50869907 50869965 -52625009 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 973 791 216 112 198 chr15 50869965 50870178 -52624796 - ORR1D1 LTR MaLR -192 182 1 4 973 408 67 0 0 chr15 50873350 50873410 -52621564 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 973 38618 5 0 1 chr15 50879812 50885598 -52609376 + L1Md_A LINE L1 1 5586 -297 4 973 9029 2 0 0 chr15 50885598 50886594 -52608380 + L1Md_A LINE L1 5587 6582 0 4 973 453 312 16 16 chr15 50886646 50886773 -52608201 + B1F SINE Alu 15 141 -8 4 973 357 271 97 43 chr15 50887362 50887547 -52607427 - B3A SINE B2 0 198 4 4 973 1657 315 85 18 chr15 50887564 50887805 -52607169 - Lx8 LINE L1 -475 6998 6734 4 973 486 0 0 0 chr15 50887805 50887859 -52607115 + (TAA)n Simple_repeat Simple_repeat 2 55 0 4 973 1657 315 85 18 chr15 50887859 50888302 -52606672 - Lx8 LINE L1 -740 6733 6269 4 973 306 0 0 0 chr15 50888305 50888339 -52606635 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 973 389 328 30 0 chr15 50888661 50888795 -52606179 - B1_Mur2 SINE Alu -9 140 3 4 973 237 65 0 0 chr15 50888795 50888826 -52606148 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 973 22 35 0 0 chr15 50888873 50888902 -52606072 + AT_rich Low_complexity Low_complexity 1 29 0 4 973 797 304 47 27 chr15 50889228 50889593 -52605381 - Lx8 LINE L1 -376 5927 5504 4 973 459 0 0 0 chr15 50889991 50890042 -52604932 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 973 537 273 0 7 chr15 50890222 50890362 -52604612 + B3A SINE B2 1 139 -59 4 973 387 125 0 0 chr15 50890374 50890446 -52604528 + (CA)n Simple_repeat Simple_repeat 2 73 0 4 973 883 204 32 5 chr15 50890462 50890649 -52604325 - Lx9 LINE L1 -467 7177 6986 4 973 440 240 84 0 chr15 50890648 50890802 -52604172 + Lx9 LINE L1 7472 7638 -6 4 973 273 269 85 11 chr15 50890840 50890934 -52604040 + L2a LINE L2 2434 2534 -885 4 973 195 429 0 0 chr15 50891002 50891079 -52603895 - L2a LINE L2 -47 3379 3303 4 973 807 201 149 0 chr15 50891242 50891436 -52603538 - URR1A DNA MER1_type -2 224 2 4 973 320 350 108 37 chr15 50891473 50891955 -52603019 + L2a LINE L2 2802 3323 -103 4 973 258 32 0 0 chr15 50892004 50892035 -52602939 + (TA)n Simple_repeat Simple_repeat 1 31 0 4 973 26 0 0 0 chr15 50893929 50893955 -52601019 + AT_rich Low_complexity Low_complexity 1 26 0 4 973 239 214 36 0 chr15 50894893 50894949 -52600025 - L1M5 LINE L1 -763 5431 5374 4 973 980 99 11 17 chr15 50895468 50895643 -52599331 + (TTTC)n Simple_repeat Simple_repeat 1 174 0 5 973 417 95 0 0 chr15 50895643 50895706 -52599268 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 5 973 209 205 0 0 chr15 50896737 50896776 -52598198 + CT-rich Low_complexity Low_complexity 3 41 0 5 973 183 42 0 0 chr15 50896932 50896956 -52598018 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 973 327 65 0 0 chr15 50896956 50897002 -52597972 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 973 378 0 0 0 chr15 50897353 50897395 -52597579 + (TC)n Simple_repeat Simple_repeat 1 42 0 5 973 248 224 35 0 chr15 50898030 50898115 -52596859 + (TA)n Simple_repeat Simple_repeat 2 89 0 5 973 399 41 0 0 chr15 50898526 50898575 -52596399 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 973 322 328 31 0 chr15 50900461 50900589 -52594385 + B1F1 SINE Alu 3 134 -15 5 973 450 167 0 0 chr15 50900766 50900850 -52594124 + (TA)n Simple_repeat Simple_repeat 1 84 0 5 973 231 36 0 0 chr15 50900852 50900880 -52594094 + (TC)n Simple_repeat Simple_repeat 1 28 0 5 973 291 28 0 0 chr15 50900880 50900915 -52594059 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 973 403 345 47 24 chr15 50902182 50902393 -52592581 - MIRb SINE MIR -16 252 37 5 973 880 306 93 35 chr15 50903645 50904301 -52590673 + L1MB3 LINE L1 5279 5972 -211 5 973 742 296 15 0 chr15 50904319 50904525 -52590449 + B3 SINE B2 2 210 -6 5 973 405 109 0 0 chr15 50905780 50905844 -52589130 + (CA)n Simple_repeat Simple_repeat 2 65 0 5 973 597 28 0 0 chr15 50907586 50907657 -52587317 + (TG)n Simple_repeat Simple_repeat 1 71 0 5 973 225 0 0 0 chr15 50907657 50907682 -52587292 + (TAG)n Simple_repeat Simple_repeat 2 26 0 5 973 2768 231 49 103 chr15 50908744 50909688 -52585286 - Lx7 LINE L1 0 7696 6804 5 973 887 351 8 58 chr15 50909773 50909955 -52585019 - ORR1E LTR MaLR 0 359 190 5 973 180 0 0 0 chr15 50909955 50909975 -52584999 + (CAGAGA)n Simple_repeat Simple_repeat 5 24 0 5 973 887 351 8 58 chr15 50909975 50910170 -52584804 - ORR1E LTR MaLR -170 189 1 5 973 819 327 53 8 chr15 50910170 50910430 -52584544 + B4A SINE B4 21 292 0 5 973 260 333 0 0 chr15 50910433 50910511 -52584463 + (CA)n Simple_repeat Simple_repeat 2 79 0 5 973 351 377 33 0 chr15 50911753 50911875 -52583099 + RSINE1 SINE B4 38 163 -2 5 973 510 31 0 0 chr15 50911909 50911973 -52583001 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 973 200 59 29 0 chr15 50912002 50912036 -52582938 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 973 1091 67 0 0 chr15 50912039 50912174 -52582800 - B1_Mus1 SINE Alu -12 136 2 5 973 648 59 0 0 chr15 50913632 50913717 -52581257 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 5 973 417 39 0 0 chr15 50913824 50913875 -52581099 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 973 204 336 19 28 chr15 50914868 50914975 -52579999 + GA-rich Low_complexity Low_complexity 4 109 0 5 973 211 214 0 82 chr15 50916367 50916428 -52578546 + polypyrimidine Low_complexity Low_complexity 4 59 0 5 973 527 240 68 34 chr15 50916866 50917073 -52577901 + B3 SINE B2 3 216 0 5 973 408 71 0 0 chr15 50917142 50917198 -52577776 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 973 222 171 0 0 chr15 50917983 50918024 -52576950 + (TTA)n Simple_repeat Simple_repeat 2 42 0 5 973 202 73 24 24 chr15 50918605 50918647 -52576327 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 5 973 211 274 0 77 chr15 50919344 50919435 -52575539 - L2a LINE L2 -8 3418 3335 5 973 238 327 97 18 chr15 50919448 50919613 -52575361 - L2a LINE L2 -62 3364 3187 5 973 527 256 136 85 chr15 50919882 50920177 -52574797 - L2a LINE L2 -485 2934 2625 5 973 615 252 31 76 chr15 50920746 50920969 -52574005 + B3 SINE B2 2 214 -2 5 973 431 123 12 0 chr15 50922230 50922311 -52572663 + (TG)n Simple_repeat Simple_repeat 2 83 0 5 973 306 0 0 0 chr15 50923881 50923915 -52571059 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 973 26 0 0 0 chr15 50927569 50927595 -52567379 + AT_rich Low_complexity Low_complexity 1 26 0 5 973 201 108 0 0 chr15 50928316 50928353 -52566621 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 5 973 544 312 21 28 chr15 50928897 50929042 -52565932 - RSINE1 SINE B4 -21 144 1 5 973 255 31 0 0 chr15 50929352 50929384 -52565590 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 5 973 200 320 53 38 chr15 50929429 50929562 -52565412 - L2a LINE L2 -76 3350 3216 5 973 198 0 0 0 chr15 50929699 50929721 -52565253 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 5 973 376 345 67 59 chr15 50929737 50930094 -52564880 - L2a LINE L2 -572 2847 2488 5 973 597 139 25 0 chr15 50930974 50931096 -52563878 + GA-rich Low_complexity Low_complexity 4 128 0 5 973 441 0 0 0 chr15 50932970 50933019 -52561955 + (CAAAA)n Simple_repeat Simple_repeat 1 49 0 5 973 204 40 0 0 chr15 50933374 50933399 -52561575 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 5 973 29 0 0 0 chr15 50934575 50934604 -52560370 + AT_rich Low_complexity Low_complexity 1 29 0 5 973 446 33 0 16 chr15 50934948 50935009 -52559965 + (TAAAA)n Simple_repeat Simple_repeat 2 61 0 5 973 23 0 0 0 chr15 50935539 50935562 -52559412 + AT_rich Low_complexity Low_complexity 1 23 0 5 973 342 0 0 0 chr15 50937018 50937056 -52557918 + (T)n Simple_repeat Simple_repeat 1 38 0 5 973 242 109 43 0 chr15 50938429 50938475 -52556499 + A-rich Low_complexity Low_complexity 2 49 0 5 973 317 273 54 54 chr15 50939516 50939663 -52555311 + MLT1F1 LTR MaLR 418 564 -5 5 973 1161 287 123 5 chr15 50941236 50941611 -52553363 + MTD LTR MaLR 1 419 0 5 973 338 320 108 8 chr15 50942921 50943050 -52551924 + L1M5 LINE L1 5606 5747 -377 5 973 34142 15 53 8 chr15 50943192 50948317 -52546657 + L1Md_A LINE L1 232 5586 -297 5 973 8609 22 1 0 chr15 50948317 50949312 -52545662 + L1Md_A LINE L1 5587 6582 0 5 973 785 163 14 43 chr15 50949636 50949777 -52545197 + B1_Mur3 SINE Alu 1 137 -12 5 973 234 156 0 0 chr15 50949780 50949825 -52545149 + G-rich Low_complexity Low_complexity 2 46 0 5 973 258 32 0 0 chr15 50949846 50949877 -52545097 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 973 547 305 55 5 chr15 50950367 50950409 -52544565 - B3 SINE B2 -5 211 167 5 973 300 53 0 0 chr15 50950409 50950447 -52544527 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 973 547 305 55 5 chr15 50950447 50950605 -52544369 - B3 SINE B2 -50 166 1 5 973 365 290 119 46 chr15 50950662 50950947 -52544027 - L1ME3A LINE L1 -284 5889 5584 5 973 35 92 0 0 chr15 50951835 50951933 -52543041 + AT_rich Low_complexity Low_complexity 1 98 0 5 973 1794 192 7 75 chr15 50951948 50952375 -52542599 - RMER10B LTR ERVL 0 398 1 5 973 23 33 0 0 chr15 50952581 50952611 -52542363 + AT_rich Low_complexity Low_complexity 1 30 0 5 973 246 310 37 83 chr15 50952618 50952727 -52542247 + PB1D10 SINE Alu 6 109 -8 5 973 273 167 0 0 chr15 50952855 50952909 -52542065 + GA-rich Low_complexity Low_complexity 4 57 0 5 973 657 330 16 16 chr15 50954193 50954353 -52540621 + B3 SINE B2 1 163 -53 5 973 426 85 0 0 chr15 50954353 50954412 -52540562 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 973 317 109 0 18 chr15 50954413 50954469 -52540505 + (CATA)n Simple_repeat Simple_repeat 1 55 0 5 973 657 330 16 16 chr15 50954469 50954497 -52540477 + B3 SINE B2 164 191 -25 5 973 207 0 0 0 chr15 50954733 50954756 -52540218 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 973 493 115 23 0 chr15 50955161 50955248 -52539726 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 5 973 224 133 43 22 chr15 50955271 50955317 -52539657 + CT-rich Low_complexity Low_complexity 4 50 0 5 973 1108 324 46 18 chr15 50959107 50959713 -52535261 + L1M2 LINE L1 4346 4968 -1175 5 973 1333 47 0 0 chr15 50959728 50959899 -52535075 - L1Md_F3 LINE L1 -3 6581 6411 5 973 3762 76 2 8 chr15 50959900 50960404 -52534570 - L1Md_F2 LINE L1 -15 6567 6067 5 973 731 291 4 26 chr15 50960660 50960886 -52534088 - ID_B1 SINE B4 -3 221 1 5 973 776 327 53 56 chr15 50961053 50961412 -52533562 - MLT1A0 LTR MaLR 0 365 8 5 973 245 378 0 11 chr15 50962525 50962616 -52532358 + PB1D10 SINE Alu 19 108 -9 5 973 465 279 225 18 chr15 50962684 50963023 -52531951 + MLT1F LTR MaLR 191 569 0 5 973 284 269 41 32 chr15 50963569 50963692 -52531282 - L1M5 LINE L1 -2068 4078 3955 5 973 655 275 103 9 chr15 50964309 50964639 -52530335 + Arthur1 DNA Tip100 3539 3899 -48 5 973 291 366 10 0 chr15 50968224 50968325 -52526649 - B1_Mus1 SINE Alu -46 102 1 5 973 391 274 0 57 chr15 50968466 50968590 -52526384 - MLT1A0 LTR MaLR 0 365 249 5 973 235 400 10 0 chr15 50968679 50968779 -52526195 - MLT1A0 LTR MaLR -222 143 43 5 973 414 0 0 0 chr15 50969042 50969088 -52525886 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 973 459 0 0 0 chr15 50969088 50969138 -52525836 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 973 221 119 0 23 chr15 50969144 50969187 -52525787 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 973 231 187 38 51 chr15 50969195 50969274 -52525700 + (TATATG)n Simple_repeat Simple_repeat 1 78 0 5 973 906 328 64 4 chr15 50969289 50969555 -52525419 - B4A SINE B4 -6 286 5 5 973 195 382 39 19 chr15 50969848 50969952 -52525022 + L2c LINE L2 3090 3195 -192 5 973 306 327 67 50 chr15 50970316 50970546 -52524428 + L1MB5 LINE L1 5784 6011 -173 5 973 571 296 27 31 chr15 50970656 50970841 -52524133 + B3A SINE B2 24 191 -7 5 973 270 0 0 0 chr15 50972872 50972902 -52522072 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 973 360 0 0 0 chr15 50973308 50973348 -52521626 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 973 1462 136 40 130 chr15 50973350 50973797 -52521177 - RMER17C LTR ERVK 0 410 4 5 973 378 0 0 0 chr15 50973797 50973839 -52521135 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 973 441 129 0 0 chr15 50973840 50973933 -52521041 + (GA)n Simple_repeat Simple_repeat 1 93 0 5 973 221 357 47 23 chr15 50974708 50974837 -52520137 - L2c LINE L2 -176 3211 3080 5 973 224 228 183 37 chr15 50974941 50975023 -52519951 + PB1D10 SINE Alu 17 110 -7 5 973 1757 201 8 8 chr15 50976420 50976792 -52518182 - Lx LINE L1 -14 6640 6269 6 973 2230 92 142 0 chr15 50976792 50977151 -52517823 - L1_Mus4 LINE L1 -29 6607 6198 6 973 251 91 0 0 chr15 50977146 50977179 -52517795 + L1_Mus4 LINE L1 6121 6153 -483 6 973 201 39 0 0 chr15 50977661 50977687 -52517287 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 973 22 0 0 0 chr15 50977817 50977839 -52517135 + AT_rich Low_complexity Low_complexity 1 22 0 6 973 274 75 0 54 chr15 50977918 50977974 -52517000 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 6 973 180 0 0 0 chr15 50977975 50977995 -52516979 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 6 973 303 328 122 70 chr15 50978488 50978701 -52516273 + B4A SINE B4 9 232 -60 6 973 399 21 0 0 chr15 50978714 50978762 -52516212 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 973 747 203 7 0 chr15 50979501 50979639 -52515335 - B1_Mur4 SINE Alu -6 144 6 6 973 226 300 28 149 chr15 50979538 50979679 -52515295 - MT2B LTR ERVL -343 258 135 6 973 1663 270 54 19 chr15 50980196 50980676 -52514298 - RCHARR1 DNA MER1_type -477 497 1 6 973 3244 82 22 4 chr15 50981057 50981508 -52513466 - L1Md_F2 LINE L1 -1 6581 6123 6 973 396 0 0 0 chr15 50982604 50982648 -52512326 + (TATG)n Simple_repeat Simple_repeat 1 44 0 6 973 209 77 0 49 chr15 50982657 50982698 -52512276 + (CAGAGA)n Simple_repeat Simple_repeat 4 42 0 6 973 1300 56 0 11 chr15 50982702 50982882 -52512092 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 6 973 729 291 71 10 chr15 50983564 50983762 -52511212 + B3 SINE B2 1 210 -6 6 973 203 296 10 0 chr15 50985284 50985382 -52509592 + T-rich Low_complexity Low_complexity 1 99 0 6 973 202 390 117 18 chr15 50986096 50986318 -52508656 - MIRb SINE MIR -16 252 9 6 973 629 241 0 8 chr15 50986723 50986857 -52508117 + B1_Mur1 SINE Alu 4 136 -13 6 973 558 0 0 0 chr15 50986857 50986919 -52508055 + (GA)n Simple_repeat Simple_repeat 1 62 0 6 974 261 367 23 12 chr15 50988134 50988305 -52506669 - MIRb SINE MIR -40 228 56 6 974 195 129 0 0 chr15 50988954 50988985 -52505989 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 974 405 39 0 0 chr15 50988985 50989036 -52505938 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 974 1201 55 0 0 chr15 50989406 50989552 -52505422 - B1_Mm SINE Alu 0 147 2 6 974 241 192 0 71 chr15 50990296 50990352 -52504622 - RMER16 LTR ERVK -348 185 134 6 974 287 329 161 24 chr15 50990514 50990769 -52504205 + B4A SINE B4 3 292 0 6 974 279 258 144 41 chr15 50991074 50991171 -52503803 + PB1D7 SINE Alu 6 112 -8 6 974 215 206 0 73 chr15 50991427 50991473 -52503501 + polypyrimidine Low_complexity Low_complexity 25 66 0 6 974 921 74 0 0 chr15 50991473 50991608 -52503366 + (TCCA)n Simple_repeat Simple_repeat 2 136 0 6 974 215 206 0 73 chr15 50991608 50991629 -52503345 + polypyrimidine Low_complexity Low_complexity 4 24 0 6 974 9205 129 8 8 chr15 50994200 50996514 -52498460 - L1_Mus4 LINE L1 -1 6635 4323 6 974 2413 76 3 0 chr15 50996518 50996862 -52498112 - MusHAL1 LINE L1 -628 2084 1740 6 974 228 291 104 28 chr15 50997659 50997765 -52497209 - MIR SINE MIR -33 229 116 6 974 372 287 77 19 chr15 50997868 50998127 -52496847 - L1MD3 LINE L1 -170 7825 7552 6 974 291 234 73 27 chr15 50998183 50998293 -52496681 + Lx5 LINE L1 6936 7050 0 6 974 1283 71 4 0 chr15 50998303 50998529 -52496445 + (GAAA)n Simple_repeat Simple_repeat 1 226 0 6 974 230 265 59 30 chr15 50998726 50998827 -52496147 - L1MD3 LINE L1 -547 7448 7345 6 974 626 283 165 15 chr15 50998881 50999341 -52495633 - Charlie2b DNA MER1_type -69 2713 2185 6 974 654 320 122 19 chr15 50999499 50999711 -52495263 + Lx8 LINE L1 7110 7342 -131 6 974 495 0 0 0 chr15 50999711 50999766 -52495208 + (GA)n Simple_repeat Simple_repeat 1 55 0 6 974 654 320 122 19 chr15 50999766 50999865 -52495109 + Lx8 LINE L1 7343 7453 -20 6 974 477 291 29 11 chr15 51000652 51000849 -52494125 - B3A SINE B2 -12 204 2 1 974 259 156 15 59 chr15 51001539 51001607 -52493367 + T-rich Low_complexity Low_complexity 2 66 0 2 974 8004 34 0 0 chr15 51001919 51002863 -52492111 - L1Md_A LINE L1 0 6582 5639 3 974 3004 80 0 2 chr15 51002852 51003276 -52491698 + L1_Mm LINE L1 1648 2070 -3813 4 974 263 273 0 0 chr15 51004642 51004708 -52490266 + GA-rich Low_complexity Low_complexity 2 67 0 5 974 288 0 0 0 chr15 51005218 51005250 -52489724 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 974 662 0 13 0 chr15 51005250 51005327 -52489647 + (GA)n Simple_repeat Simple_repeat 2 80 0 7 974 2477 220 72 48 chr15 51007036 51007665 -52487309 + RMER1B Other Other 359 1002 -64 8 974 474 18 0 0 chr15 51008340 51008395 -52486579 + (CA)n Simple_repeat Simple_repeat 2 56 0 9 974 510 17 0 0 chr15 51008395 51008453 -52486521 + (GA)n Simple_repeat Simple_repeat 2 60 0 1 974 24 32 0 0 chr15 51009093 51009124 -52485850 + AT_rich Low_complexity Low_complexity 1 31 0 1 974 209 200 0 0 chr15 51009947 51009997 -52484977 + T-rich Low_complexity Low_complexity 1 50 0 1 974 854 293 5 5 chr15 51010092 51010281 -52484693 + B3 SINE B2 1 189 -27 1 974 29 28 0 0 chr15 51013121 51013157 -52481817 + AT_rich Low_complexity Low_complexity 1 36 0 1 974 384 22 0 0 chr15 51013264 51013309 -52481665 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 974 395 291 16 41 chr15 51014129 51014251 -52480723 - B2_Mm2 SINE B2 -76 119 1 1 974 875 167 0 11 chr15 51014627 51014809 -52480165 + GA-rich Low_complexity Low_complexity 1 180 0 1 974 628 58 0 0 chr15 51015276 51015363 -52479611 - Lx LINE L1 -6 6648 6562 1 974 21 0 0 0 chr15 51015846 51015867 -52479107 + AT_rich Low_complexity Low_complexity 1 21 0 1 974 283 335 147 28 chr15 51016137 51016355 -52478619 + MIRc SINE MIR 25 268 0 2 974 300 365 131 41 chr15 51016552 51016872 -52478102 - MLT1A0 LTR MaLR -2 363 15 2 974 245 352 89 68 chr15 51017083 51017318 -52477656 - MLT2E LTR ERVL -351 277 38 2 974 289 241 48 136 chr15 51017399 51017494 -52477480 + RMER15 LTR ERVL 45 134 -441 2 974 2383 213 29 53 chr15 51017494 51018083 -52476891 + RMER15 LTR ERVL 1 575 0 2 974 289 241 48 136 chr15 51018083 51018112 -52476862 + RMER15 LTR ERVL 135 158 -417 2 974 646 306 12 12 chr15 51018108 51018280 -52476694 + RMER15 LTR ERVL 273 444 -131 2 974 1230 236 77 60 chr15 51018280 51018645 -52476329 + ORR1D1 LTR MaLR 1 371 -3 2 974 409 255 10 0 chr15 51018655 51018757 -52476217 + RMER15 LTR ERVL 452 554 -21 2 974 657 271 365 7 chr15 51018960 51019258 -52475716 + MTD LTR MaLR 1 405 -14 2 974 345 100 0 0 chr15 51019439 51019489 -52475485 + (TCC)n Simple_repeat Simple_repeat 1 50 0 2 974 192 77 0 0 chr15 51021067 51021093 -52473881 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 974 729 349 21 4 chr15 51021156 51021395 -52473579 - B4A SINE B4 -2 290 48 2 974 312 284 36 9 chr15 51022046 51022156 -52472818 - PB1D7 SINE Alu -7 113 1 3 974 296 300 0 14 chr15 51022161 51022232 -52472742 - ID4 SINE ID -3 80 11 3 974 2796 22 0 0 chr15 51025778 51026102 -52468872 - L1Md_A LINE L1 0 6582 6259 3 974 203 152 0 21 chr15 51026262 51026309 -52468665 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 974 1110 274 17 27 chr15 51026470 51026766 -52468208 + Lx6 LINE L1 7108 7400 -60 3 974 902 138 0 22 chr15 51026766 51026944 -52468030 + GA-rich Low_complexity Low_complexity 1 174 0 3 974 225 0 0 0 chr15 51026944 51026969 -52468005 + (GAA)n Simple_repeat Simple_repeat 1 25 0 3 974 278 342 68 5 chr15 51027242 51027433 -52467541 - L1MC4 LINE L1 -651 7391 7189 3 974 234 281 18 0 chr15 51028931 51028988 -52465986 - MIR SINE MIR -51 211 154 3 974 282 116 0 0 chr15 51029751 51029794 -52465180 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 974 861 10 0 0 chr15 51029794 51029892 -52465082 + (GGAAA)n Simple_repeat Simple_repeat 2 99 0 4 974 438 319 7 7 chr15 51030959 51031098 -52463876 + Lx8 LINE L1 7040 7178 -295 4 974 622 261 77 79 chr15 51031098 51031451 -52463523 + RLTR15 LTR ERVK 1 352 -7 4 974 228 234 0 0 chr15 51031535 51031582 -52463392 + RMER15 LTR ERVL 420 466 -109 4 974 267 320 25 25 chr15 51031584 51031744 -52463230 + GA-rich Low_complexity Low_complexity 2 161 0 4 974 580 252 20 34 chr15 51032249 51032397 -52462577 - B1_Mus2 SINE Alu -1 146 1 4 974 341 322 16 78 chr15 51032397 51032450 -52462524 - ID SINE ID -146 78 38 4 974 2604 76 10 55 chr15 51032615 51033018 -52461956 - L1_Mus3 LINE L1 -3 6635 6251 4 974 2419 43 40 0 chr15 51033018 51033322 -52461652 + L1_Mus3 LINE L1 5933 6248 -390 4 974 2435 31 0 0 chr15 51034431 51034721 -52460253 + L1Md_A LINE L1 6293 6582 0 4 974 227 271 215 0 chr15 51034750 51034857 -52460117 + L1MC1 LINE L1 6186 6315 -18 4 974 33 0 0 0 chr15 51035005 51035038 -52459936 + AT_rich Low_complexity Low_complexity 1 33 0 5 974 552 178 0 0 chr15 51035262 51035369 -52459605 + (CA)n Simple_repeat Simple_repeat 1 107 0 5 974 338 370 61 12 chr15 51036271 51036435 -52458539 - HAL1-3A_ME LINE L1 -403 2455 2284 5 974 203 0 37 0 chr15 51036435 51036462 -52458512 + (TTTC)n Simple_repeat Simple_repeat 3 30 0 5 974 200 318 12 12 chr15 51038970 51039056 -52455918 + CT-rich Low_complexity Low_complexity 2 87 0 5 974 434 322 90 17 chr15 51039074 51039251 -52455723 - L1MC4a LINE L1 -1011 6871 6682 5 974 352 343 25 52 chr15 51039540 51040037 -52454937 - L1MC4a LINE L1 -2028 5967 5486 5 974 311 352 81 37 chr15 51040186 51040457 -52454517 - L1MC4a LINE L1 -3554 2592 2310 5 974 23 54 0 0 chr15 51040675 51040712 -52454262 + AT_rich Low_complexity Low_complexity 1 37 0 5 974 24 0 0 0 chr15 51040818 51040842 -52454132 + AT_rich Low_complexity Low_complexity 1 24 0 5 974 282 237 227 43 chr15 51041026 51041167 -52453807 + B4 SINE B4 8 174 -118 5 974 189 0 0 0 chr15 51041180 51041201 -52453773 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 974 497 16 16 0 chr15 51041201 51041262 -52453712 + (GA)n Simple_repeat Simple_repeat 2 64 0 6 974 198 308 77 0 chr15 51041885 51041950 -52453024 - L2a LINE L2 -16 3410 3341 6 974 227 303 111 11 chr15 51042099 51042189 -52452785 + MIR SINE MIR 65 163 -99 6 974 289 276 68 11 chr15 51042310 51042398 -52452576 + PB1D10 SINE Alu 23 115 -2 6 974 598 351 58 67 chr15 51042764 51043228 -52451746 + MLT1C LTR MaLR 8 467 0 6 974 496 0 31 0 chr15 51043477 51043541 -52451433 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 974 326 191 95 0 chr15 51043688 51043751 -52451223 - B4 SINE B4 -28 264 196 6 974 470 125 0 12 chr15 51043751 51043832 -52451142 + (TA)n Simple_repeat Simple_repeat 1 80 0 6 974 213 39 0 0 chr15 51043832 51043858 -52451116 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 974 728 35 53 0 chr15 51044848 51044961 -52450013 + L1Md_F3 LINE L1 6466 6584 0 6 974 270 0 0 0 chr15 51045028 51045058 -52449916 + (TA)n Simple_repeat Simple_repeat 1 30 0 7 974 180 375 46 15 chr15 51045208 51045338 -52449636 + MIR SINE MIR 31 164 -98 7 974 561 55 0 0 chr15 51046218 51046291 -52448683 + (TG)n Simple_repeat Simple_repeat 2 74 0 7 974 240 207 0 0 chr15 51046634 51046692 -52448282 + CT-rich Low_complexity Low_complexity 2 59 0 7 974 507 90 0 0 chr15 51046714 51046792 -52448182 + (TG)n Simple_repeat Simple_repeat 2 79 0 7 974 515 340 84 0 chr15 51047579 51047817 -52447157 - MER2 DNA MER2_type -80 265 8 7 974 292 291 243 49 chr15 51049860 51050127 -52444847 + MLT1A LTR MaLR 1 319 -55 7 974 1072 236 31 42 chr15 51050399 51050660 -52444314 - Lx9 LINE L1 -804 6840 6583 7 974 2255 215 39 43 chr15 51050650 51051185 -52443789 + Lx9 LINE L1 6841 7373 -271 7 974 548 307 66 0 chr15 51051192 51051329 -52443645 - RSINE1 SINE B4 -17 148 3 7 974 33 0 0 0 chr15 51051329 51051362 -52443612 + AT_rich Low_complexity Low_complexity 1 33 0 7 974 217 368 73 40 chr15 51051460 51051610 -52443364 - L2 LINE L2 -1772 1647 1493 8 974 3915 225 24 21 chr15 51053283 51054174 -52440800 + Lx7 LINE L1 6804 7696 0 8 974 378 342 65 37 chr15 51054529 51054775 -52440199 + L1MC3 LINE L1 43 295 -5750 8 974 317 257 27 0 chr15 51055187 51055261 -52439713 + Lx7 LINE L1 5589 5664 -2032 8 974 781 283 29 57 chr15 51055293 51055492 -52439482 - Lx6 LINE L1 -2 7458 7256 8 974 1568 48 0 0 chr15 51055492 51055678 -52439296 + B2_Mm1a SINE B2 1 186 -7 8 974 1651 280 235 13 chr15 51055678 51056432 -52438542 - Lx6 LINE L1 -205 7255 6123 8 974 525 323 132 36 chr15 51056622 51056981 -52437993 + L1MC3 LINE L1 1103 1488 -5263 8 974 915 36 0 0 chr15 51056981 51057092 -52437882 + (GAA)n Simple_repeat Simple_repeat 3 113 0 8 974 525 323 132 36 chr15 51057092 51057201 -52437773 + L1MC3 LINE L1 1489 1615 -5136 8 974 417 264 134 34 chr15 51057263 51057502 -52437472 + L1MC3 LINE L1 1885 2147 -4604 8 974 423 221 0 0 chr15 51057637 51057714 -52437260 + B1_Mus1 SINE Alu 1 77 -71 8 974 2640 199 34 90 chr15 51057724 51058135 -52436839 - RMER6D LTR ERVK -4 716 347 8 974 854 99 0 8 chr15 51058135 51058267 -52436707 + (TCTCCC)n Simple_repeat Simple_repeat 1 131 0 8 974 2640 199 34 90 chr15 51058267 51058610 -52436364 - RMER6D LTR ERVK -374 346 4 8 974 501 100 60 36 chr15 51058610 51058680 -52436294 + B1_Mur4 SINE Alu 66 140 -10 9 974 186 43 0 0 chr15 51058680 51058703 -52436271 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 9 974 299 277 40 51 chr15 51058740 51058915 -52436059 + L1MC3 LINE L1 2529 2701 -3863 8 974 1103 75 0 14 chr15 51058973 51059121 -52435853 + B1_Mm SINE Alu 2 147 0 9 974 225 154 0 0 chr15 51059134 51059173 -52435801 + GA-rich Low_complexity Low_complexity 3 41 0 9 974 402 74 0 0 chr15 51059167 51059221 -52435753 + (GA)n Simple_repeat Simple_repeat 2 55 0 9 974 7742 29 0 14 chr15 51059377 51060312 -52434662 - L1Md_F2 LINE L1 -1 6581 5660 9 974 717 300 85 26 chr15 51060328 51060861 -52434113 + L1MC3 LINE L1 3871 4433 -2131 8 974 1331 291 121 48 chr15 51061137 51061958 -52433016 + L1MC3 LINE L1 5909 6789 -1414 8 974 549 96 0 0 chr15 51061990 51062084 -52432890 + (TC)n Simple_repeat Simple_repeat 1 94 0 9 974 291 54 0 0 chr15 51062084 51062121 -52432853 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 974 230 301 65 0 chr15 51062136 51062259 -52432715 + L1MC3 LINE L1 6843 6973 -1230 8 974 286 227 15 15 chr15 51062421 51062488 -52432486 + L1MC3 LINE L1 7132 7198 -1005 8 974 222 37 0 0 chr15 51062574 51062601 -52432373 + (TG)n Simple_repeat Simple_repeat 1 27 0 9 974 319 191 124 0 chr15 51062601 51062706 -52432268 + Lx9 LINE L1 7520 7637 -7 9 974 546 323 47 57 chr15 51064270 51064549 -52430425 + B4A SINE B4 5 280 -12 1 974 1271 90 0 0 chr15 51064847 51065014 -52429960 - L1_Mus2 LINE L1 -325 6241 6075 1 974 2603 73 0 6 chr15 51065014 51065358 -52429616 + L1_Mus2 LINE L1 6216 6557 -9 1 974 974 295 47 73 chr15 51066515 51066896 -52428078 - MTEa LTR MaLR -5 374 4 1 974 209 290 0 0 chr15 51067253 51067315 -52427659 + MIRc SINE MIR 170 231 -37 1 974 763 337 58 62 chr15 51068046 51068412 -52426562 + Lx9 LINE L1 7083 7470 -174 1 974 413 81 16 0 chr15 51068412 51068474 -52426500 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 1 974 763 337 58 62 chr15 51068474 51068644 -52426330 + Lx9 LINE L1 7471 7617 -27 1 974 3280 114 4 10 chr15 51069371 51069866 -52425108 - L1_Mus4 LINE L1 0 6636 6145 1 974 1089 77 0 0 chr15 51069866 51070021 -52424953 + MusHAL1 LINE L1 475 629 -2083 1 974 14742 58 0 2 chr15 51070018 51071883 -52423091 + L1Md_F2 LINE L1 3725 5586 -297 1 974 7949 45 9 0 chr15 51071883 51072858 -52422116 + L1Md_F2 LINE L1 5587 6570 -12 1 974 262 322 11 22 chr15 51072909 51073001 -52421973 + LTR33A_ LTR ERVL 15 105 -426 1 974 533 167 0 86 chr15 51073066 51073171 -52421803 - PB1D9 SINE Alu -7 113 18 1 974 971 272 27 19 chr15 51074080 51074339 -52420635 + B4A SINE B4 9 269 -23 1 974 255 146 0 0 chr15 51074407 51074462 -52420512 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 974 362 257 144 41 chr15 51076620 51076766 -52418208 - MER5A1 DNA MER1_type -5 161 1 1 974 370 270 90 17 chr15 51076852 51077029 -52417945 + L1MD1 LINE L1 5788 5977 -265 1 974 2415 134 5 5 chr15 51077421 51077797 -52417177 + Lx3B LINE L1 6597 6972 -1 1 974 26 50 0 0 chr15 51077797 51077837 -52417137 + AT_rich Low_complexity Low_complexity 1 40 0 1 974 283 312 52 67 chr15 51077966 51078100 -52416874 + LTR33 LTR ERVL 14 145 -370 1 974 189 147 0 0 chr15 51079871 51079905 -52415069 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 1 974 767 279 148 28 chr15 51080630 51080954 -52414020 + MTE2b LTR MaLR 2 364 -15 1 974 622 218 257 0 chr15 51081234 51081413 -52413561 + URR1B DNA MER1_type 1 225 0 1 974 299 380 41 18 chr15 51081642 51081811 -52413163 + B4A SINE B4 100 272 -20 1 974 225 0 0 0 chr15 51081946 51081971 -52413003 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 974 293 47 23 0 chr15 51083768 51083811 -52411163 + (TTA)n Simple_repeat Simple_repeat 1 44 0 1 974 792 232 0 47 chr15 51083819 51083991 -52410983 - RSINE1 SINE B4 0 165 2 1 974 355 121 15 0 chr15 51085017 51085083 -52409891 - Lx2 LINE L1 -14 6983 6917 1 974 408 300 123 64 chr15 51085499 51085734 -52409240 - MIRb SINE MIR -1 267 19 1 974 252 277 0 24 chr15 51085770 51085855 -52409119 + CT-rich Low_complexity Low_complexity 3 85 0 1 974 233 290 90 15 chr15 51086424 51086557 -52408417 - MLT1D LTR MaLR 0 505 363 1 974 230 368 5 104 chr15 51086640 51086852 -52408122 - MLT1D LTR MaLR -302 203 13 1 974 596 314 61 29 chr15 51088380 51088659 -52406315 + B4A SINE B4 3 290 -2 1 974 249 135 0 0 chr15 51088790 51088842 -52406132 + (TCTCTG)n Simple_repeat Simple_repeat 2 53 0 1 974 348 77 0 0 chr15 51088874 51088926 -52406048 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 974 894 19 0 0 chr15 51091263 51091367 -52403607 + (TC)n Simple_repeat Simple_repeat 1 104 0 1 974 476 287 150 20 chr15 51091825 51091978 -52402996 - B3A SINE B2 -21 174 2 1 974 456 67 0 0 chr15 51092335 51092395 -52402579 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 974 345 324 10 10 chr15 51092629 51092732 -52402242 + PB1D10 SINE Alu 7 109 -8 1 974 213 348 180 24 chr15 51093331 51093625 -52401349 - L2 LINE L2 -691 2728 2389 1 974 388 283 68 60 chr15 51094085 51094333 -52400641 + L1MEf LINE L1 1133 1382 -4860 1 974 233 263 0 26 chr15 51094352 51094430 -52400544 + L1MEf LINE L1 3806 3881 -2265 1 974 280 324 61 26 chr15 51097653 51097767 -52397207 + PB1 SINE Alu 3 120 -7 1 974 423 0 0 0 chr15 51097854 51097901 -52397073 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 974 645 14 0 0 chr15 51097903 51097977 -52396997 + (GA)n Simple_repeat Simple_repeat 2 75 0 1 974 206 53 79 0 chr15 51098477 51098515 -52396459 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 1 974 33 0 0 0 chr15 51099842 51099875 -52395099 + AT_rich Low_complexity Low_complexity 1 33 0 1 974 215 355 28 62 chr15 51100128 51100305 -52394669 - MIR SINE MIR -42 220 50 1 974 203 225 56 14 chr15 51101598 51101670 -52393304 + A-rich Low_complexity Low_complexity 3 77 0 1 974 269 277 67 67 chr15 51101843 51101932 -52393042 + PB1D7 SINE Alu 17 105 -15 1 974 203 271 132 53 chr15 51103581 51103733 -52391241 + MIRb SINE MIR 92 255 -13 1 974 256 293 0 0 chr15 51104242 51104300 -52390674 + C-rich Low_complexity Low_complexity 2 59 0 1 974 198 103 0 0 chr15 51104873 51104902 -52390072 + (TCC)n Simple_repeat Simple_repeat 3 31 0 1 974 378 0 0 0 chr15 51105159 51105201 -52389773 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 974 189 0 0 0 chr15 51107970 51107991 -52386983 + (TAA)n Simple_repeat Simple_repeat 1 21 0 1 974 462 348 12 47 chr15 51108143 51108315 -52386659 + MTD LTR MaLR 20 185 -234 1 974 442 316 59 20 chr15 51108348 51108551 -52386423 + Lx8 LINE L1 6936 7146 -327 1 974 183 167 0 0 chr15 51108608 51108650 -52386324 + (TTAG)n Simple_repeat Simple_repeat 3 44 0 1 974 509 325 343 21 chr15 51108970 51109198 -52385776 - MTEa LTR MaLR -1 369 65 1 974 183 42 0 0 chr15 51109198 51109222 -52385752 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 974 509 358 30 20 chr15 51109222 51109286 -52385688 - MTEa LTR MaLR -315 64 3 1 974 25 51 0 0 chr15 51109403 51109442 -52385532 + AT_rich Low_complexity Low_complexity 1 39 0 1 974 597 70 39 66 chr15 51109761 51109943 -52385031 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 1 974 180 301 60 0 chr15 51111678 51111761 -52383213 + L2a LINE L2 3064 3151 -236 1 974 203 305 70 29 chr15 51111840 51111952 -52383022 + L2a LINE L2 3266 3387 0 1 974 195 204 0 0 chr15 51112719 51112773 -52382201 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 1 974 283 339 35 11 chr15 51112775 51112900 -52382074 - PB1D7 SINE Alu -8 140 12 1 974 195 286 63 42 chr15 51113037 51113132 -52381842 - L4 LINE RTE -1629 400 304 1 974 251 293 0 0 chr15 51113606 51113664 -52381310 + ID4_ SINE ID 1 58 -25 1 974 322 254 270 32 chr15 51113709 51113835 -52381139 + MTE2b LTR MaLR 222 377 -2 1 974 666 58 0 0 chr15 51115310 51115397 -52379577 + (GGAA)n Simple_repeat Simple_repeat 3 89 0 1 974 245 328 115 39 chr15 51116727 51116987 -52377987 + B4A SINE B4 1 280 -12 1 974 342 0 0 0 chr15 51116988 51117026 -52377948 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 974 192 97 0 0 chr15 51117982 51118013 -52376961 + (CAAA)n Simple_repeat Simple_repeat 3 33 0 1 975 391 310 17 17 chr15 51118437 51118555 -52376419 + B4A SINE B4 171 288 -4 1 975 393 39 0 0 chr15 51118577 51118628 -52376346 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 975 1261 126 92 0 chr15 51118749 51118956 -52376018 - URR1A DNA MER1_type 0 226 1 1 975 351 0 0 0 chr15 51119978 51120017 -52374957 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1 975 276 170 0 0 chr15 51121995 51122048 -52372926 + (TATG)n Simple_repeat Simple_repeat 2 54 0 1 975 366 328 0 33 chr15 51122117 51122300 -52372674 + (TATG)n Simple_repeat Simple_repeat 2 178 0 1 975 190 0 67 0 chr15 51123734 51123764 -52371210 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1 975 237 83 0 0 chr15 51124448 51124484 -52370490 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 975 213 233 16 32 chr15 51127108 51127170 -52367804 + CT-rich Low_complexity Low_complexity 1 61 0 1 975 339 241 126 0 chr15 51127418 51127505 -52367469 + PB1D10 SINE Alu 1 98 -19 1 975 378 0 0 0 chr15 51128295 51128337 -52366637 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 975 738 286 77 25 chr15 51128477 51128800 -52366174 + MER67C LTR ERV1 57 396 -315 1 975 903 144 0 0 chr15 51128923 51129076 -52365898 + (TTCC)n Simple_repeat Simple_repeat 4 156 0 1 975 237 83 0 0 chr15 51129710 51129746 -52365228 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 975 1859 60 8 4 chr15 51129806 51130057 -52364917 + L1_Mus3 LINE L1 6384 6635 -3 1 975 185 50 117 0 chr15 51130874 51130934 -52364040 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 975 917 317 79 46 chr15 51131081 51131560 -52363414 + MLT1D LTR MaLR 1 495 -10 1 975 32 81 0 0 chr15 51131587 51131661 -52363313 + AT_rich Low_complexity Low_complexity 1 74 0 1 975 416 267 82 23 chr15 51131844 51131969 -52363005 + PB1D9 SINE Alu 1 120 -7 1 975 477 0 0 0 chr15 51132148 51132201 -52362773 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 975 459 0 0 0 chr15 51132259 51132310 -52362664 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 975 263 52 69 0 chr15 51133360 51133418 -52361556 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 975 263 324 29 7 chr15 51134435 51134534 -52360440 + PB1D10 SINE Alu 4 103 -17 1 975 215 103 0 25 chr15 51135335 51135375 -52359599 + (TAA)n Simple_repeat Simple_repeat 3 41 0 1 975 259 343 64 43 chr15 51135523 51135663 -52359311 - MLT1G1 LTR MaLR -337 242 100 1 975 318 355 37 37 chr15 51135780 51135944 -52359030 - MLT1G1-int LTR MaLR -48 1441 1278 1 975 554 325 46 65 chr15 51135931 51136237 -52358737 - MLT1G1 LTR MaLR -47 532 233 1 975 582 79 0 0 chr15 51136730 51136819 -52358155 + (CA)n Simple_repeat Simple_repeat 1 89 0 1 975 371 320 76 17 chr15 51137183 51137355 -52357619 + MER53 DNA hAT 1 182 -11 1 975 256 264 0 103 chr15 51138308 51138405 -52356569 + MT2B LTR ERVL 169 255 -346 1 975 503 186 0 30 chr15 51138324 51138424 -52356550 + PB1D10 SINE Alu 21 117 0 1 975 2620 202 75 19 chr15 51138851 51139493 -52355481 + Lx9 LINE L1 6962 7639 -5 1 975 35 24 0 0 chr15 51139493 51139535 -52355439 + AT_rich Low_complexity Low_complexity 1 42 0 1 975 349 304 67 110 chr15 51139986 51140404 -52354570 - RMER10A LTR ERVL -25 417 18 1 975 568 314 70 93 chr15 51141745 51142057 -52352917 + ORR1E LTR MaLR 3 307 -52 2 975 321 261 135 0 chr15 51142247 51142358 -52352616 + MLT1B LTR MaLR 249 374 -16 2 975 509 305 37 57 chr15 51143055 51143351 -52351623 + L3 LINE CR1 3703 3992 -497 2 975 472 105 19 19 chr15 51143913 51144020 -52350954 + (TCTCTG)n Simple_repeat Simple_repeat 2 108 0 2 975 516 45 0 0 chr15 51144021 51144088 -52350886 + (TG)n Simple_repeat Simple_repeat 1 67 0 2 975 232 163 41 0 chr15 51145136 51145185 -52349789 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 2 975 1125 96 0 17 chr15 51145193 51145374 -52349600 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 2 975 513 0 0 0 chr15 51145375 51145432 -52349542 + (GAAA)n Simple_repeat Simple_repeat 1 57 0 2 975 497 108 0 0 chr15 51146647 51146730 -52348244 - L1_Mus4 LINE L1 -4 6632 6550 2 975 354 168 29 78 chr15 51146814 51146917 -52348057 - L1_Mus4 LINE L1 -86 6550 6453 2 975 25 0 0 0 chr15 51147111 51147136 -52347838 + AT_rich Low_complexity Low_complexity 1 25 0 2 975 455 276 39 26 chr15 51148005 51148161 -52346813 - RSINE1 SINE B4 -6 159 2 2 975 582 103 0 0 chr15 51148384 51148471 -52346503 + (TAG)n Simple_repeat Simple_repeat 1 87 0 2 975 342 67 0 0 chr15 51148482 51148527 -52346447 + (ATG)n Simple_repeat Simple_repeat 2 46 0 2 975 234 338 81 25 chr15 51148862 51149023 -52345951 + MER3 DNA MER1_type 5 174 -35 2 975 239 271 29 77 chr15 51150212 51150316 -52344658 - MER117 DNA MER1_type -78 119 21 2 975 208 236 0 35 chr15 51150981 51151038 -52343936 + GA-rich Low_complexity Low_complexity 2 56 0 2 975 847 106 12 18 chr15 51151056 51151219 -52343755 + (GA)n Simple_repeat Simple_repeat 2 163 0 2 975 769 147 11 28 chr15 51151282 51151464 -52343510 + GA-rich Low_complexity Low_complexity 1 179 0 2 975 309 203 40 11 chr15 51151504 51151678 -52343296 + GA-rich Low_complexity Low_complexity 2 180 0 2 975 253 328 87 2 chr15 51153062 51153198 -52341776 - MIR SINE MIR -32 236 83 2 975 678 25 0 0 chr15 51153756 51153836 -52341138 + (TA)n Simple_repeat Simple_repeat 2 81 0 2 975 1002 47 0 0 chr15 51154336 51154465 -52340509 + B1_Mm SINE Alu 17 145 -2 2 975 441 0 0 0 chr15 51154466 51154515 -52340459 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 975 234 0 0 0 chr15 51155226 51155252 -52339722 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 975 21 82 0 0 chr15 51155351 51155400 -52339574 + AT_rich Low_complexity Low_complexity 1 49 0 2 975 214 279 12 12 chr15 51155696 51155776 -52339198 + A-rich Low_complexity Low_complexity 2 81 0 2 975 1043 237 29 11 chr15 51155980 51156261 -52338713 + MER121 Unknown Unknown 18 303 -109 2 975 877 118 0 11 chr15 51156641 51156821 -52338153 + (GA)n Simple_repeat Simple_repeat 2 179 0 2 975 451 214 16 0 chr15 51156822 51156948 -52338026 + (CAGA)n Simple_repeat Simple_repeat 1 128 0 2 975 394 338 22 4 chr15 51156950 51157075 -52337899 - B1F SINE Alu -10 139 10 2 975 2290 97 32 9 chr15 51158590 51158934 -52336040 - Lx3_Mus LINE L1 -1 7008 6657 2 975 24 0 0 0 chr15 51159892 51159916 -52335058 + AT_rich Low_complexity Low_complexity 1 24 0 2 975 264 159 0 0 chr15 51160183 51160227 -52334747 + MLT2D LTR ERVL 515 558 -2 2 975 209 108 0 26 chr15 51161323 51161361 -52333613 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 975 214 75 24 48 chr15 51161448 51161490 -52333484 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 2 975 25 0 0 0 chr15 51161566 51161591 -52333383 + AT_rich Low_complexity Low_complexity 1 25 0 2 975 182 191 0 21 chr15 51161771 51161819 -52333155 + GA-rich Low_complexity Low_complexity 2 48 0 2 975 2330 201 76 17 chr15 51163757 51164298 -52330676 - Lx9 LINE L1 -2 7642 7070 2 975 205 346 19 29 chr15 51165075 51165179 -52329795 + L2c LINE L2 3285 3387 0 2 975 1091 207 5 0 chr15 51165285 51165493 -52329481 - B3 SINE B2 -6 210 2 2 975 268 303 87 39 chr15 51165878 51166005 -52328969 - Charlie1 DNA MER1_type -5 2776 2644 2 975 487 296 52 26 chr15 51165993 51166187 -52328787 - Charlie1 DNA MER1_type -2542 239 41 2 975 2996 70 10 2 chr15 51166833 51167235 -52327739 - L1_Mus2 LINE L1 -1 6565 6161 2 975 2229 69 7 0 chr15 51167235 51167526 -52327448 + L1_Mus2 LINE L1 5901 6193 -373 2 975 585 64 0 0 chr15 51167678 51167756 -52327218 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 2 975 294 156 33 22 chr15 51168879 51168971 -52326003 - Lx9 LINE L1 -2 7642 7550 2 975 228 246 70 0 chr15 51168987 51169044 -52325930 + Lx9 LINE L1 6784 6844 -800 2 975 2322 237 38 38 chr15 51169122 51169788 -52325186 - Lx9 LINE L1 -221 7423 6758 2 975 313 286 102 28 chr15 51169792 51169900 -52325074 - Lx9 LINE L1 -1648 5996 5881 2 975 210 353 0 14 chr15 51170070 51170139 -52324835 - MIRc SINE MIR -196 72 5 2 975 22 0 0 0 chr15 51170613 51170635 -52324339 + AT_rich Low_complexity Low_complexity 1 22 0 2 975 260 273 116 54 chr15 51171029 51171176 -52323798 - MARNA DNA Mariner -17 569 414 2 975 327 293 112 0 chr15 51171940 51172056 -52322918 - MIRc SINE MIR -43 225 97 2 975 936 27 0 0 chr15 51172913 51173024 -52321950 + (CA)n Simple_repeat Simple_repeat 2 112 0 2 975 489 14 43 0 chr15 51173107 51173177 -52321797 + (CATA)n Simple_repeat Simple_repeat 4 76 0 2 975 297 357 24 8 chr15 51173274 51173401 -52321573 + MLT1A0 LTR MaLR 12 140 -225 2 975 268 324 114 47 chr15 51177474 51177623 -52317351 - MIRb SINE MIR -82 186 28 2 975 346 227 84 76 chr15 51178377 51178496 -52316478 + LTR40b LTR ERVL 115 234 -228 2 975 755 10 0 0 chr15 51178526 51178622 -52316352 + L1Md_T LINE L1 6486 6581 -1 2 975 225 226 0 75 chr15 51178645 51178712 -52316262 + LTR40b LTR ERVL 319 380 -82 2 975 243 320 42 105 chr15 51178873 51179016 -52315958 - MLT1K LTR MaLR -442 153 20 2 975 180 0 0 0 chr15 51179428 51179448 -52315526 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 2 975 2583 23 10 0 chr15 51179859 51180167 -52314807 - L1Md_F2 LINE L1 -1 6581 6271 2 975 3378 74 0 0 chr15 51180170 51180628 -52314346 + L1_Mm LINE L1 3552 4009 -1874 2 975 450 0 0 0 chr15 51180785 51180835 -52314139 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 975 302 303 208 17 chr15 51182458 51182636 -52312338 + RMER15 LTR ERVL 364 575 0 2 975 1896 322 49 44 chr15 51182732 51183505 -52311469 + RMER15-int LTR ERVL 106 882 -4117 2 975 1512 81 18 9 chr15 51183505 51183729 -52311245 + L1_Mus3 LINE L1 6406 6631 -7 2 975 734 332 41 6 chr15 51183748 51184066 -52310908 + RMER15-int LTR ERVL 873 1201 -3798 2 975 384 339 93 67 chr15 51184180 51184597 -52310377 + RMER15-int LTR ERVL 1370 1797 -3202 2 975 724 366 25 6 chr15 51184863 51185226 -52309748 + Lx8 LINE L1 6921 7290 -183 2 975 285 378 118 0 chr15 51187945 51188149 -52306825 - MIRb SINE MIR -31 237 10 2 975 229 304 20 61 chr15 51189377 51189475 -52305499 - PB1D10 SINE Alu -22 95 2 2 975 3622 155 22 25 chr15 51191189 51191825 -52303149 + Lx2B LINE L1 6362 6995 -5 2 975 7866 94 3 0 chr15 51191997 51193065 -52301909 - L1_Mm LINE L1 -125 5758 4688 2 975 888 279 71 15 chr15 51197417 51197755 -52297219 - ORR1E LTR MaLR -2 357 1 2 975 21 0 0 0 chr15 51197969 51197990 -52296984 + AT_rich Low_complexity Low_complexity 1 21 0 2 975 946 249 19 19 chr15 51198032 51198245 -52296729 + B3 SINE B2 1 213 -3 2 975 2565 207 35 24 chr15 51199283 51199907 -52295067 + Lx9 LINE L1 7013 7643 -1 2 975 687 321 44 24 chr15 51201455 51201912 -52293062 - L1MA6 LINE L1 -2 6298 5833 2 975 358 268 77 13 chr15 51202408 51202563 -52292411 + L1MA6 LINE L1 6130 6294 -6 2 975 545 52 0 13 chr15 51203255 51203333 -52291641 + (TG)n Simple_repeat Simple_repeat 2 78 0 2 975 546 284 78 0 chr15 51203335 51203476 -52291498 - B3A SINE B2 -46 152 1 2 975 428 0 19 0 chr15 51203499 51203551 -52291423 + (TTTTA)n Simple_repeat Simple_repeat 3 55 0 2 975 379 333 48 60 chr15 51203556 51203681 -52291293 - RSINE1 SINE B4 0 165 43 2 975 2291 122 0 0 chr15 51203681 51204008 -52290966 - ORR1A2 LTR MaLR 0 327 1 2 975 379 333 48 60 chr15 51204008 51204048 -52290926 - RSINE1 SINE B4 -123 42 2 2 975 25 0 0 0 chr15 51204190 51204215 -52290759 + AT_rich Low_complexity Low_complexity 1 25 0 2 975 186 133 0 0 chr15 51206321 51206351 -52288623 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 975 2391 92 14 0 chr15 51207090 51207436 -52287538 - L1_Mus3 LINE L1 0 6638 6288 2 975 412 89 0 0 chr15 51207436 51207492 -52287482 + L1_Mus3 LINE L1 6225 6280 -358 2 975 379 365 0 0 chr15 51207510 51207655 -52287319 + L1MC4 LINE L1 6707 6851 -1191 2 975 467 33 0 16 chr15 51207672 51207734 -52287240 + (TAA)n Simple_repeat Simple_repeat 1 61 0 2 975 776 80 9 0 chr15 51207747 51207860 -52287114 + (GGAA)n Simple_repeat Simple_repeat 4 117 0 2 975 6685 76 7 3 chr15 51208266 51209190 -52285784 - Lx3_Mus LINE L1 -661 5225 4299 2 975 9067 82 29 4 chr15 51209187 51209995 -52284979 + Lx3_Mus LINE L1 5205 6034 -975 2 975 375 23 0 0 chr15 51209995 51210039 -52284935 + (GGGA)n Simple_repeat Simple_repeat 1 44 0 2 975 9067 101 38 23 chr15 51210039 51211009 -52283965 + Lx3_Mus LINE L1 6035 7007 -2 2 975 3936 229 34 36 chr15 51211014 51212003 -52282971 - Lx9 LINE L1 -2 7642 6656 2 975 436 208 0 0 chr15 51212134 51212206 -52282768 - Lx9 LINE L1 -421 7223 7152 2 975 329 381 30 72 chr15 51212226 51212393 -52282581 - B4A SINE B4 0 292 133 2 975 258 346 52 37 chr15 51212421 51212556 -52282418 - B4 SINE B4 -153 139 3 2 975 568 262 99 40 chr15 51212573 51212724 -52282250 + B3A SINE B2 1 160 -38 2 975 531 82 0 0 chr15 51212736 51212809 -52282165 + (TA)n Simple_repeat Simple_repeat 1 73 0 2 975 1919 246 130 22 chr15 51216284 51216328 -52278646 - Lx5 LINE L1 -1 7049 6996 2 975 522 0 0 0 chr15 51216328 51216386 -52278588 + (TTCC)n Simple_repeat Simple_repeat 4 61 0 2 975 1919 246 130 22 chr15 51216386 51216840 -52278134 - Lx5 LINE L1 -55 6995 6497 2 975 2180 235 29 38 chr15 51216840 51217367 -52277607 + Lx5 LINE L1 5941 6462 -588 2 975 1092 77 0 7 chr15 51217371 51217515 -52277459 + B1_Mus1 SINE Alu 2 144 -4 2 975 513 0 0 0 chr15 51217517 51217574 -52277400 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 2 975 354 372 32 16 chr15 51217802 51217988 -52276986 + MLT1A LTR MaLR 186 374 0 2 975 4870 61 1 17 chr15 51218274 51218926 -52276048 - L1Md_F2 LINE L1 0 6582 5941 2 975 793 186 14 0 chr15 51218949 51219094 -52275880 + B1_Mur3 SINE Alu 3 149 0 2 975 448 210 79 10 chr15 51219372 51219473 -52275501 - B1_Mus1 SINE Alu -8 112 5 2 975 214 273 18 0 chr15 51220279 51220334 -52274640 - B1F SINE Alu -2 147 92 2 975 708 12 0 0 chr15 51220417 51220498 -52274476 + (TAGA)n Simple_repeat Simple_repeat 3 83 0 2 975 949 240 55 8 chr15 51220500 51220756 -52274218 - Lx9 LINE L1 -199 7445 7178 3 975 1134 62 0 7 chr15 51226349 51226496 -52268478 + B1_Mm SINE Alu 1 146 -1 3 975 500 278 0 11 chr15 51226496 51226674 -52268300 + GA-rich Low_complexity Low_complexity 1 176 0 3 975 366 276 46 29 chr15 51228587 51228762 -52266212 - L1MB5 LINE L1 -24 6150 5973 3 975 1180 186 18 0 chr15 51231030 51231251 -52263723 + URR1B DNA MER1_type 1 225 0 3 975 585 42 0 0 chr15 51231588 51231660 -52263314 + (GA)n Simple_repeat Simple_repeat 1 72 0 3 975 4165 151 6 8 chr15 51231785 51232491 -52262483 - L1_Mur2 LINE L1 -296 5581 4878 3 975 4780 188 37 8 chr15 51232491 51233538 -52261436 + Lx4B LINE L1 5878 6969 -31 3 975 267 31 0 0 chr15 51233538 51233570 -52261404 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 3 975 252 380 62 28 chr15 51235134 51235310 -52259664 + MIRc SINE MIR 21 202 -66 3 975 343 340 55 6 chr15 51235425 51235588 -52259386 - MIR SINE MIR -30 232 62 3 975 402 39 0 0 chr15 51235657 51235709 -52259265 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 975 1383 25 0 0 chr15 51235709 51235871 -52259103 + (CA)n Simple_repeat Simple_repeat 1 163 0 3 975 481 354 55 10 chr15 51236323 51236523 -52258451 + MER20 DNA MER1_type 1 209 -10 3 975 207 171 0 0 chr15 51237819 51237854 -52257120 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 3 975 309 283 68 34 chr15 51238428 51238495 -52256479 + ID_B1 SINE B4 104 171 -53 3 975 207 0 0 0 chr15 51238495 51238518 -52256456 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 975 309 283 68 34 chr15 51238518 51238567 -52256407 + ID_B1 SINE B4 172 223 -1 3 975 926 88 7 0 chr15 51238621 51238768 -52256206 + (TAGA)n Simple_repeat Simple_repeat 2 149 0 3 975 294 288 0 0 chr15 51239582 51239641 -52255333 - B4 SINE B4 -15 277 219 3 975 221 287 63 87 chr15 51239679 51239805 -52255169 - B1_Mur4 SINE Alu -19 131 9 3 975 742 276 20 10 chr15 51239695 51239893 -52255081 - B4 SINE B4 -88 204 5 3 975 358 326 98 81 chr15 51240167 51240270 -52254704 - ORR1D2 LTR MaLR -3 367 258 3 975 264 59 0 0 chr15 51240270 51240304 -52254670 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 3 975 358 326 98 81 chr15 51240304 51240557 -52254417 - ORR1D2 LTR MaLR -113 257 5 3 975 744 92 0 0 chr15 51242357 51242476 -52252498 + (TAGA)n Simple_repeat Simple_repeat 4 122 0 3 975 230 229 81 16 chr15 51242722 51242784 -52252190 + MER58B DNA MER1_type 255 320 -21 3 975 869 279 104 20 chr15 51243200 51243449 -52251525 + B4A SINE B4 1 270 -22 3 975 21 36 0 0 chr15 51244433 51244461 -52250513 + AT_rich Low_complexity Low_complexity 1 28 0 3 975 207 100 0 0 chr15 51244471 51244501 -52250473 + (TATG)n Simple_repeat Simple_repeat 2 31 0 3 975 519 330 50 66 chr15 51244931 51245328 -52249646 + MTEa LTR MaLR 6 370 0 3 975 613 206 117 5 chr15 51245556 51245761 -52249213 + Lx9 LINE L1 7416 7643 -1 3 975 414 329 66 50 chr15 51245843 51246163 -52248811 + Lx8 LINE L1 5829 6153 -1320 3 975 2479 204 2 42 chr15 51246209 51246714 -52248260 + RMER6D LTR ERVK 231 715 -5 3 975 435 121 30 0 chr15 51246739 51246838 -52248136 + (TAGA)n Simple_repeat Simple_repeat 1 102 0 3 975 1261 350 115 45 chr15 51246926 51247854 -52247120 + Lx8 LINE L1 6274 7266 -207 3 976 247 98 0 0 chr15 51249677 51249718 -52245256 - Lx4A LINE L1 -1 7057 7017 3 976 5945 51 4 1 chr15 51249931 51250677 -52244297 - L1Md_F3 LINE L1 -4 6580 5833 3 976 2721 61 0 0 chr15 51250677 51251036 -52243938 + L1Md_F LINE L1 790 1148 -2669 3 976 312 48 0 0 chr15 51251159 51251201 -52243773 + (T)n Simple_repeat Simple_repeat 1 42 0 3 976 222 37 0 0 chr15 51251754 51251781 -52243193 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 976 479 103 26 0 chr15 51251830 51251908 -52243066 + (TTTC)n Simple_repeat Simple_repeat 1 80 0 3 976 427 197 272 51 chr15 51251908 51252102 -52242872 - B3A SINE B2 0 216 2 3 976 214 338 97 60 chr15 51252437 51252654 -52242320 - L2 LINE L2 -452 2967 2743 3 976 376 392 45 53 chr15 51253989 51254253 -52240721 + B4 SINE B4 6 267 -25 3 976 504 0 0 0 chr15 51254277 51254333 -52240641 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 976 469 314 67 44 chr15 51255008 51255188 -52239786 + MLT2B3 LTR ERVL 111 294 -260 3 976 207 200 0 0 chr15 51255304 51255344 -52239630 + (TATATG)n Simple_repeat Simple_repeat 1 40 0 3 976 896 262 64 0 chr15 51255484 51255686 -52239288 - B3 SINE B2 -1 215 1 3 976 23 78 0 0 chr15 51256010 51256061 -52238913 + AT_rich Low_complexity Low_complexity 1 51 0 3 976 231 342 23 81 chr15 51256169 51256255 -52238719 + B1F1 SINE Alu 6 86 -63 3 976 197 159 0 22 chr15 51256300 51256345 -52238629 + CT-rich Low_complexity Low_complexity 2 45 0 3 976 1591 103 14 72 chr15 51258107 51258400 -52236574 - L1_Mus3 LINE L1 -1 6637 6362 3 976 444 156 0 0 chr15 51258431 51258508 -52236466 - L1_Mus3 LINE L1 -257 6381 6305 3 976 258 275 22 11 chr15 51258673 51258765 -52236209 + CT-rich Low_complexity Low_complexity 1 93 0 3 976 766 299 14 19 chr15 51258820 51259035 -52235939 - ID_B1 SINE B4 -8 216 3 3 976 265 417 46 29 chr15 51259131 51259358 -52235616 - MIRb SINE MIR -28 240 4 3 976 198 71 0 0 chr15 51259619 51259647 -52235327 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 976 185 300 147 52 chr15 51261267 51261383 -52233591 - MER5B DNA MER1_type 0 178 52 3 976 226 0 0 56 chr15 51261386 51261422 -52233552 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 3 976 244 346 25 81 chr15 51261498 51261585 -52233389 - MLT1J2 LTR MaLR -14 434 346 3 976 2025 125 148 3 chr15 51261585 51261929 -52233045 - ORR1B1 LTR MaLR 0 394 1 3 976 244 346 25 81 chr15 51261929 51262039 -52232935 - MLT1J2 LTR MaLR -103 345 248 3 976 432 123 0 0 chr15 51263052 51263125 -52231849 + (CA)n Simple_repeat Simple_repeat 2 74 0 3 976 570 29 0 0 chr15 51263258 51263326 -52231648 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 976 479 305 94 38 chr15 51263353 51263619 -52231355 - B4A SINE B4 -10 282 2 3 976 403 305 160 9 chr15 51263724 51263936 -52231038 + Charlie16a DNA MER1_type 50 293 -49 3 976 610 293 75 31 chr15 51265470 51265724 -52229250 - MIRc SINE MIR 0 268 4 3 976 10478 63 4 2 chr15 51265893 51267247 -52227727 + L1Md_F2 LINE L1 4230 5585 -298 3 976 7688 53 11 3 chr15 51267248 51268221 -52226753 + L1Md_F2 LINE L1 5587 6567 -15 3 976 262 337 40 50 chr15 51268235 51268435 -52226539 - L1ME1 LINE L1 -34 6145 5948 3 976 1181 68 0 0 chr15 51268789 51268935 -52226039 - B1_Mus1 SINE Alu -2 146 1 3 976 23 0 0 0 chr15 51269016 51269039 -52225935 + AT_rich Low_complexity Low_complexity 1 23 0 3 976 229 296 27 27 chr15 51270250 51270323 -52224651 - L2a LINE L2 -12 3414 3342 3 976 1574 214 53 11 chr15 51271462 51271757 -52223217 + MER121 Unknown Unknown 4 313 -99 3 976 414 0 0 0 chr15 51271757 51271803 -52223171 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 976 1574 214 53 11 chr15 51271803 51271862 -52223112 + MER121 Unknown Unknown 314 373 -39 3 976 216 0 0 0 chr15 51273690 51273714 -52221260 + (A)n Simple_repeat Simple_repeat 1 24 0 3 976 737 281 78 24 chr15 51273835 51274201 -52220773 + MTD LTR MaLR 1 413 -6 3 976 190 348 15 119 chr15 51274905 51275039 -52219935 - MIRb SINE MIR -23 245 126 3 976 281 298 105 55 chr15 51276382 51276563 -52218411 - MIRb SINE MIR -40 228 39 3 976 298 334 24 0 chr15 51276681 51276781 -52218193 + ID4 SINE ID 1 102 -50 3 976 228 35 0 0 chr15 51277815 51277844 -52217130 + (TGG)n Simple_repeat Simple_repeat 2 30 0 3 976 354 308 60 0 chr15 51278132 51278265 -52216709 + B1F1 SINE Alu 1 141 -8 3 976 182 108 54 0 chr15 51278267 51278304 -52216670 + GA-rich Low_complexity Low_complexity 1 39 0 3 976 418 221 56 84 chr15 51280509 51280652 -52214322 - Lx2B LINE L1 -114 6886 6748 3 976 1278 294 39 7 chr15 51281089 51281520 -52213454 - Lx8 LINE L1 -134 7339 6895 3 976 307 322 52 0 chr15 51281799 51281914 -52213060 - MER2 DNA MER2_type -222 123 3 3 976 21308 146 15 46 chr15 51283293 51285436 -52209538 + Lx LINE L1 697 2869 -3017 3 976 450 0 0 0 chr15 51285436 51285486 -52209488 + (GAAA)n Simple_repeat Simple_repeat 3 52 0 3 976 21308 163 19 65 chr15 51285486 51285786 -52209188 + Lx LINE L1 2870 3011 -2875 3 976 1105 91 0 0 chr15 51285786 51285929 -52209045 + B1_Mus1 SINE Alu 1 143 -5 3 976 21308 163 19 65 chr15 51285929 51286244 -52208730 + Lx LINE L1 3012 3304 -2582 3 976 180 0 0 0 chr15 51286244 51286264 -52208710 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 3 976 21308 155 23 46 chr15 51286264 51289644 -52205330 + Lx LINE L1 3305 6642 -12 3 976 526 269 80 6 chr15 51290042 51290218 -52204756 - MTEb LTR MaLR -27 352 164 3 976 443 312 31 49 chr15 51290198 51290230 -52204744 + MTE2a LTR MaLR 200 227 -152 3 976 2124 177 2 40 chr15 51290230 51290653 -52204321 - MTB_Mm LTR MaLR 0 407 1 3 976 443 312 31 49 chr15 51290653 51290782 -52204192 + MTE2a LTR MaLR 228 358 -21 3 976 427 276 0 0 chr15 51290795 51290893 -52204081 - MTEb LTR MaLR -273 106 9 3 976 24 32 0 0 chr15 51293114 51293145 -52201829 + AT_rich Low_complexity Low_complexity 1 31 0 3 976 411 73 0 0 chr15 51293198 51293253 -52201721 + (CTG)n Simple_repeat Simple_repeat 2 56 0 3 976 434 211 9 0 chr15 51294481 51294590 -52200384 + GA-rich Low_complexity Low_complexity 1 110 0 3 976 265 365 19 9 chr15 51294612 51294720 -52200254 + MER5B DNA MER1_type 2 110 -68 3 976 298 371 24 24 chr15 51294969 51295176 -52199798 + L3 LINE CR1 3973 4179 -310 3 976 21 0 0 0 chr15 51295683 51295704 -52199270 + AT_rich Low_complexity Low_complexity 1 21 0 3 976 321 254 0 26 chr15 51295755 51295868 -52199106 - Lx8 LINE L1 -2 7471 7362 3 976 262 294 94 58 chr15 51295982 51296173 -52198801 - MIR SINE MIR 0 262 65 3 976 182 235 132 24 chr15 51296320 51296403 -52198571 + MIR SINE MIR 146 237 -25 3 976 213 278 39 49 chr15 51296381 51296483 -52198491 + MIR SINE MIR 149 249 -13 3 976 882 303 87 62 chr15 51296971 51297421 -52197553 + MER74B LTR ERVL 64 524 -98 3 976 632 312 57 31 chr15 51299225 51299453 -52195521 + B4A SINE B4 11 244 -48 3 976 1114 97 0 0 chr15 51299463 51299607 -52195367 + B1_Mus1 SINE Alu 5 148 0 3 976 720 189 0 0 chr15 51299607 51299750 -52195224 + GA-rich Low_complexity Low_complexity 1 143 0 4 976 516 286 29 35 chr15 51299766 51299940 -52195034 + B3 SINE B2 44 216 0 4 976 219 333 0 24 chr15 51300009 51300092 -52194882 + (CATA)n Simple_repeat Simple_repeat 4 84 0 4 976 1143 49 28 0 chr15 51300619 51300763 -52194211 + B1_Mus1 SINE Alu 1 148 0 4 976 198 330 10 69 chr15 51301899 51302000 -52192974 - MIR SINE MIR -1 261 167 4 976 250 320 45 53 chr15 51302269 51302401 -52192573 + RMER12 LTR ERVK 720 850 -472 4 976 198 254 0 0 chr15 51302405 51302472 -52192502 + (TA)n Simple_repeat Simple_repeat 2 68 0 4 976 213 189 0 0 chr15 51302585 51302622 -52192352 - ID4 SINE ID -45 38 2 4 976 338 280 76 0 chr15 51302670 51302788 -52192186 - Arthur1 DNA Tip100 -183 3764 3638 4 976 526 330 165 12 chr15 51302804 51303374 -52191600 - Arthur1 DNA Tip100 -334 3613 2957 4 976 218 368 96 38 chr15 51303558 51303798 -52191176 + L2 LINE L2 2727 2980 -439 4 976 5452 234 106 10 chr15 51305077 51306582 -52188392 - Lx6 LINE L1 -2 7458 5810 4 976 8851 176 44 29 chr15 51306575 51307909 -52187065 - L1_Mur3 LINE L1 -2515 3365 2058 4 976 435 19 0 0 chr15 51307909 51307961 -52187013 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 976 8851 184 41 38 chr15 51307961 51308871 -52186103 - L1_Mur3 LINE L1 -3823 2057 1123 4 976 348 24 0 0 chr15 51308871 51308912 -52186062 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 976 992 202 5 27 chr15 51308912 51309159 -52185815 - L1_Mur3 LINE L1 -6547 1181 918 4 976 1922 65 0 0 chr15 51310044 51310289 -52184685 + L1_Mus1 LINE L1 6319 6563 -4 4 976 252 145 95 31 chr15 51310353 51310430 -52184544 + MIRc SINE MIR 174 247 -21 4 976 7615 64 4 6 chr15 51310705 51312074 -52182900 - L1_Mus1 LINE L1 0 6567 5202 4 976 1369 95 0 9 chr15 51313715 51313928 -52181046 - L1_Mus4 LINE L1 -6 6630 6420 4 976 265 325 12 105 chr15 51314039 51314211 -52180763 - MER20 DNA MER1_type -6 213 58 4 976 319 193 0 0 chr15 51315028 51315085 -52179889 - RMER17C LTR ERVK -352 58 2 4 976 261 0 0 0 chr15 51315337 51315366 -52179608 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 976 594 0 0 0 chr15 51315638 51315704 -52179270 + (TC)n Simple_repeat Simple_repeat 1 66 0 4 976 504 0 0 0 chr15 51316084 51316140 -52178834 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 976 1894 209 162 37 chr15 51317228 51317741 -52177233 + RMER19B LTR ERVK 308 884 -18 4 976 3056 41 0 0 chr15 51317743 51318111 -52176863 + L1Md_T LINE L1 6214 6581 -1 4 976 1717 228 102 84 chr15 51318242 51318887 -52176087 + Lx7 LINE L1 7040 7696 0 4 976 345 109 0 0 chr15 51318911 51318975 -52175999 + (T)n Simple_repeat Simple_repeat 1 64 0 4 976 1054 303 48 21 chr15 51319358 51319878 -52175096 + Lx9 LINE L1 7108 7641 -3 4 976 1113 224 18 14 chr15 51320414 51320636 -52174338 + MTC LTR MaLR 1 223 -198 4 976 346 312 21 0 chr15 51320637 51320730 -52174244 - RSINE1 SINE B4 -32 133 39 4 976 390 255 31 31 chr15 51320723 51320820 -52174154 + B1F SINE Alu 38 134 -15 4 976 276 30 0 0 chr15 51321184 51321217 -52173757 + (GA)n Simple_repeat Simple_repeat 1 33 0 4 976 705 280 18 45 chr15 51321217 51321241 -52173733 + MTC LTR MaLR 179 203 -193 4 976 1226 90 0 6 chr15 51321241 51321420 -52173554 + (GAA)n Simple_repeat Simple_repeat 3 180 0 4 976 1095 178 30 11 chr15 51321420 51321619 -52173355 + MTC LTR MaLR 204 421 0 4 976 3943 19 0 0 chr15 51322021 51322627 -52172347 - L1Md_A LINE L1 -518 6064 5459 4 976 2506 45 0 3 chr15 51322630 51322940 -52172034 + L1Md_A LINE L1 6273 6581 -1 4 976 1358 146 0 5 chr15 51324019 51324226 -52170748 - URR1B DNA MER1_type 0 225 20 4 976 308 240 0 0 chr15 51324591 51324666 -52170308 - Lx5 LINE L1 -198 6852 6778 4 976 236 286 51 13 chr15 51325028 51325106 -52169868 + ID4_ SINE ID 3 83 0 4 976 189 94 0 0 chr15 51325427 51325459 -52169515 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 4 976 725 263 44 34 chr15 51326039 51326244 -52168730 - B3 SINE B2 -8 208 2 4 976 4252 48 0 19 chr15 51326826 51327362 -52167612 - L1Md_F2 LINE L1 0 6582 6057 4 976 753 176 27 47 chr15 51329914 51330063 -52164911 + B1_Mm SINE Alu 2 147 0 4 976 272 48 24 0 chr15 51330071 51330113 -52164861 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 976 459 305 147 17 chr15 51330114 51330414 -52164560 + L1MDa LINE L1 104 442 -6191 4 976 198 336 103 28 chr15 51331934 51332041 -52162933 + MIR3 SINE MIR 69 183 -25 4 976 450 288 59 8 chr15 51332399 51332518 -52162456 + B1_Mur1 SINE Alu 1 125 -24 4 976 324 188 0 0 chr15 51332524 51332593 -52162381 + (ATG)n Simple_repeat Simple_repeat 1 69 0 4 976 189 0 0 0 chr15 51335023 51335044 -52159930 + (C)n Simple_repeat Simple_repeat 1 21 0 4 976 243 0 0 0 chr15 51335372 51335399 -52159575 + (A)n Simple_repeat Simple_repeat 1 27 0 4 976 3584 238 50 10 chr15 51338189 51339075 -52155899 - Lx9 LINE L1 -417 7227 6307 4 976 1057 225 57 151 chr15 51339208 51339685 -52155289 + Lx9 LINE L1 7212 7643 -1 4 976 232 308 0 0 chr15 51339702 51339754 -52155220 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 976 243 0 0 0 chr15 51340724 51340751 -52154223 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 976 958 78 0 43 chr15 51340768 51340956 -52154018 + (TC)n Simple_repeat Simple_repeat 1 180 0 4 976 3250 125 26 26 chr15 51341845 51342410 -52152564 - Lx LINE L1 -25 6629 6065 4 976 358 36 36 18 chr15 51343512 51343568 -52151406 + (TTTTC)n Simple_repeat Simple_repeat 2 58 0 4 976 895 234 143 0 chr15 51345297 51345570 -52149404 + L1_Mur3 LINE L1 505 816 -6912 4 976 1145 171 100 14 chr15 51345599 51345890 -52149084 + L1_Mur3 LINE L1 1366 1681 -4199 4 976 544 150 36 27 chr15 51345886 51345996 -52148978 - L1_Mur3 LINE L1 -2007 3873 3763 4 976 3126 256 102 6 chr15 51346000 51346763 -52148211 + Lx6 LINE L1 6395 7219 -241 4 976 189 0 0 0 chr15 51346763 51346784 -52148190 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 4 976 3126 256 102 6 chr15 51346784 51346951 -52148023 + Lx6 LINE L1 7220 7414 -46 4 976 510 17 0 0 chr15 51346967 51347026 -52147948 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 4 976 849 47 0 0 chr15 51347026 51347132 -52147842 + (GGGA)n Simple_repeat Simple_repeat 3 108 0 4 976 1325 252 15 26 chr15 51347165 51347507 -52147467 - RLTR20A2 LTR ERVK 0 578 241 4 976 261 304 0 0 chr15 51348158 51348227 -52146747 - ID2 SINE ID -11 72 4 4 976 288 333 76 48 chr15 51348232 51348377 -52146597 - B1F SINE Alu 0 149 1 4 976 216 0 0 0 chr15 51348416 51348440 -52146534 + (A)n Simple_repeat Simple_repeat 1 24 0 4 976 270 257 15 56 chr15 51349221 51349353 -52145621 + BC1_Mm scRNA scRNA 1 123 -29 4 976 360 289 77 0 chr15 51349607 51349711 -52145263 - MER5A DNA MER1_type -51 138 27 4 976 270 0 0 0 chr15 51350231 51350261 -52144713 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 976 342 0 0 0 chr15 51350261 51350298 -52144676 + (GA)n Simple_repeat Simple_repeat 1 38 0 4 976 529 320 39 0 chr15 51350304 51350460 -52144514 - B3A SINE B2 -35 163 2 4 976 1513 196 91 23 chr15 51350484 51350834 -52144140 + ORR1D1 LTR MaLR 1 374 0 4 976 399 157 0 0 chr15 51352130 51352200 -52142774 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 976 226 326 27 68 chr15 51352843 51352991 -52141983 + MIRc SINE MIR 90 234 -34 4 976 903 290 35 92 chr15 51354244 51354646 -52140328 - MTEa LTR MaLR 0 379 1 4 976 603 0 0 0 chr15 51355042 51355109 -52139865 + (TC)n Simple_repeat Simple_repeat 2 68 0 4 976 666 37 0 0 chr15 51355109 51355189 -52139785 + (TG)n Simple_repeat Simple_repeat 2 82 0 4 976 23 0 0 0 chr15 51355337 51355360 -52139614 + GC_rich Low_complexity Low_complexity 1 23 0 4 976 486 0 0 0 chr15 51356358 51356412 -52138562 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 976 661 255 77 39 chr15 51357376 51357584 -52137390 + ID_B1 SINE B4 1 216 -8 4 976 188 67 0 32 chr15 51357750 51357781 -52137193 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 4 976 321 197 0 0 chr15 51357886 51357952 -52137022 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 976 204 143 0 23 chr15 51357955 51357998 -52136976 + (ATTG)n Simple_repeat Simple_repeat 3 44 0 4 976 462 338 30 88 chr15 51358492 51358820 -52136154 + MER102a DNA MER1_type 1 309 -21 4 976 1185 65 0 0 chr15 51359853 51360008 -52134966 + (GAAA)n Simple_repeat Simple_repeat 3 157 0 4 976 7847 27 7 4 chr15 51360008 51360935 -52134039 + L1Md_F3 LINE L1 5656 6584 0 4 976 671 0 0 12 chr15 51360940 51361020 -52133954 + (GAAA)n Simple_repeat Simple_repeat 3 81 0 4 976 184 348 157 0 chr15 51362366 51362455 -52132519 + MER5A DNA MER1_type 65 167 -22 4 976 263 264 108 21 chr15 51362656 51362749 -52132225 - PB1D10 SINE Alu 0 117 17 4 976 571 273 76 7 chr15 51362690 51362834 -52132140 - ID_B1 SINE B4 -69 155 2 4 976 315 253 156 10 chr15 51362857 51362953 -52132021 + MER58B DNA MER1_type 222 331 -10 4 976 281 284 12 12 chr15 51362956 51363038 -52131936 + ID4_ SINE ID 2 83 0 4 976 583 123 8 32 chr15 51363052 51363178 -52131796 + GA-rich Low_complexity Low_complexity 4 126 0 4 976 1117 92 0 11 chr15 51363207 51363382 -52131592 + (GGGA)n Simple_repeat Simple_repeat 1 173 0 4 976 3523 15 2 0 chr15 51363455 51363850 -52131124 - MTA_Mm LTR MaLR 0 396 1 4 976 9584 20 0 0 chr15 51363850 51364948 -52130026 - MTA_Mm-int LTR MaLR 0 1098 1 4 976 3523 15 2 0 chr15 51364948 51365343 -52129631 - MTA_Mm LTR MaLR 0 396 1 4 976 329 238 11 91 chr15 51366666 51366842 -52128132 - L1MA8 LINE L1 0 6291 6130 4 976 492 317 35 0 chr15 51366868 51367010 -52127964 - MER58A DNA MER1_type -71 153 7 4 976 310 269 25 13 chr15 51367243 51367322 -52127652 + ID4 SINE ID 2 81 -2 4 976 189 0 0 0 chr15 51368760 51368781 -52126193 + (A)n Simple_repeat Simple_repeat 1 21 0 4 976 978 110 0 0 chr15 51368781 51368927 -52126047 + (GGAA)n Simple_repeat Simple_repeat 3 148 0 4 976 213 39 0 0 chr15 51369107 51369133 -52125841 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 976 278 265 35 9 chr15 51369386 51369499 -52125475 + L1M5 LINE L1 5493 5613 -746 5 976 2349 149 8 10 chr15 51369868 51370261 -52124713 - Lx4B LINE L1 -1 7057 6666 5 976 209 224 103 0 chr15 51370449 51370507 -52124467 - MIRb SINE MIR -74 194 131 5 976 210 406 14 35 chr15 51371027 51371170 -52123804 - MIRm SINE MIR -83 193 54 5 976 22 0 0 0 chr15 51372079 51372101 -52122873 + AT_rich Low_complexity Low_complexity 1 22 0 5 976 843 368 66 13 chr15 51372330 51372726 -52122248 + LTR16B LTR ERVL 2 418 -45 5 976 219 69 0 0 chr15 51372873 51372902 -52122072 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 976 769 233 67 0 chr15 51373074 51373267 -52121707 + MIRc SINE MIR 63 268 0 5 976 228 188 145 0 chr15 51376177 51376246 -52118728 - ID4_ SINE ID -4 79 1 5 976 493 277 129 18 chr15 51377029 51377308 -52117666 + L1MDa LINE L1 83 392 -6241 5 976 284 248 41 16 chr15 51377425 51377548 -52117426 + L1MDa LINE L1 2340 2465 -4168 5 976 23 0 0 0 chr15 51377804 51377827 -52117147 + AT_rich Low_complexity Low_complexity 1 23 0 5 976 1888 282 100 37 chr15 51378020 51379294 -52115680 + L1MDa LINE L1 3016 4369 -2168 5 976 288 272 70 89 chr15 51379385 51379416 -52115558 + L1M4 LINE L1 3930 3961 -2179 5 976 303 301 0 14 chr15 51379416 51379490 -52115484 + ID4_ SINE ID 1 73 -10 5 976 359 272 70 89 chr15 51379490 51379672 -52115302 + L1M4 LINE L1 3962 4145 -2001 5 976 243 236 26 60 chr15 51379679 51379796 -52115178 - Lx7 LINE L1 -5 7691 7579 5 977 479 322 74 56 chr15 51380693 51381240 -52113734 + L1MDa LINE L1 4565 5129 -1408 5 977 427 299 68 42 chr15 51381240 51381432 -52113542 + B3A SINE B2 2 198 0 5 977 479 322 74 56 chr15 51381432 51381612 -52113362 + L1MDa LINE L1 5130 5305 -1232 5 977 377 252 0 16 chr15 51381782 51381903 -52113071 - Lx7 LINE L1 -15 7681 7563 5 977 265 24 0 0 chr15 51382520 51382561 -52112413 + L1Md_A LINE L1 6542 6582 0 5 977 413 256 69 55 chr15 51382978 51383123 -52111851 - MER20 DNA MER1_type -67 152 6 5 977 187 297 105 35 chr15 51383133 51383276 -52111698 - MIRb SINE MIR -106 162 10 5 977 841 314 173 42 chr15 51383420 51384015 -52110959 - MLT1E1A LTR MaLR 0 680 1 5 977 416 293 58 83 chr15 51384278 51384483 -52110491 + B4 SINE B4 7 206 -86 5 977 5083 121 11 21 chr15 51384826 51385623 -52109351 - Lx2 LINE L1 -14 6983 6195 5 977 4885 138 46 46 chr15 51385913 51386811 -52108163 - RMER17A2 LTR ERVK -8 898 1 5 977 350 276 86 55 chr15 51387982 51388162 -52106812 - MIRb SINE MIR -77 191 2 5 977 252 260 77 38 chr15 51388257 51388269 -52106705 + ID4_ SINE ID 2 35 -117 5 977 258 317 0 0 chr15 51388269 51388329 -52106645 + tRNA-Ala-GCY_ tRNA tRNA 8 67 -8 5 977 252 260 77 38 chr15 51388329 51388347 -52106627 + ID4_ SINE ID 36 94 -58 5 977 335 392 77 4 chr15 51388397 51388643 -52106331 + B4A SINE B4 27 290 -2 5 977 412 239 120 23 chr15 51388661 51388794 -52106180 + B1F2 SINE Alu 4 149 0 5 977 258 156 0 0 chr15 51389601 51389646 -52105328 + A-rich Low_complexity Low_complexity 1 45 0 5 977 872 150 7 14 chr15 51390579 51390721 -52104253 + Lx5 LINE L1 6307 6447 -603 5 977 2846 123 35 4 chr15 51390732 51391100 -52103874 - RLTR31B_Mm LTR ERVK -86 471 102 5 977 603 0 0 0 chr15 51391100 51391167 -52103807 + (TC)n Simple_repeat Simple_repeat 2 68 0 5 977 2846 123 35 4 chr15 51391167 51391255 -52103719 - RLTR31B_Mm LTR ERVK -456 101 3 5 977 2906 196 94 6 chr15 51391255 51391805 -52103169 + Lx5 LINE L1 6451 7049 -1 5 977 298 327 42 60 chr15 51391909 51392075 -52102899 - ORR1D2 LTR MaLR 0 379 217 5 977 978 188 86 14 chr15 51392138 51392348 -52102626 + URR1A DNA MER1_type 2 226 0 5 977 464 252 84 49 chr15 51392348 51392487 -52102487 - ORR1D2 LTR MaLR -226 144 1 5 977 4147 51 12 12 chr15 51392529 51393023 -52101951 - L1Md_F2 LINE L1 -12 6570 6077 5 977 1128 222 45 151 chr15 51393196 51393620 -52101354 + MTE2a LTR MaLR 1 379 0 5 977 211 221 87 103 chr15 51394254 51394380 -52100594 - MER5B DNA MER1_type -17 161 38 5 977 1049 283 52 39 chr15 51394778 51395258 -52099716 + RMER15 LTR ERVL 4 570 -5 5 977 196 230 87 103 chr15 51395906 51396032 -52098942 - MER5B DNA MER1_type -17 161 38 5 977 184 271 61 141 chr15 51395961 51396060 -52098914 + MER5B DNA MER1_type 72 162 -16 5 977 448 311 130 48 chr15 51397902 51398626 -52096348 + L1ME3 LINE L1 2937 3719 -2427 5 977 21 0 0 0 chr15 51398687 51398708 -52096266 + AT_rich Low_complexity Low_complexity 1 21 0 5 977 412 312 55 83 chr15 51398708 51399273 -52095701 + L1ME3 LINE L1 4019 4552 -1594 5 977 702 277 27 7 chr15 51399405 51399554 -52095420 + RSINE1 SINE B4 8 159 -6 5 977 214 313 80 69 chr15 51399554 51399580 -52095394 + B2_Mm1t SINE B2 7 183 -10 5 977 23 33 0 0 chr15 51399586 51399616 -52095358 + AT_rich Low_complexity Low_complexity 1 30 0 5 977 512 288 164 25 chr15 51399618 51399971 -52095003 - Lx9 LINE L1 -22 7622 7221 5 977 612 67 0 0 chr15 51400132 51400222 -52094752 + (TC)n Simple_repeat Simple_repeat 1 90 0 5 977 1282 306 79 42 chr15 51400222 51400659 -52094315 - Lx8 LINE L1 -263 7210 6768 5 977 7397 121 23 0 chr15 51400659 51401690 -52093284 + Lx2 LINE L1 5939 6993 -4 5 977 1282 306 79 42 chr15 51401690 51401821 -52093153 - Lx8 LINE L1 -706 6767 6621 5 977 188 34 0 33 chr15 51401835 51401865 -52093109 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 977 414 298 131 38 chr15 51402080 51402478 -52092496 + L1ME3 LINE L1 5290 5724 -449 5 977 687 324 117 9 chr15 51402478 51402924 -52092050 - MLT1D LTR MaLR 0 505 12 5 977 443 314 69 59 chr15 51403132 51403335 -52091639 + RLTR9A2 LTR ERVK 179 383 0 5 977 288 273 67 35 chr15 51403335 51403499 -52091475 + L1ME3 LINE L1 5907 6079 -94 5 977 188 291 37 37 chr15 51403682 51403764 -52091210 + MIRc SINE MIR 108 189 -79 5 977 252 86 0 0 chr15 51404623 51404658 -52090316 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 977 965 213 190 0 chr15 51404680 51404896 -52090078 - B4 SINE B4 -14 278 22 5 977 267 54 0 0 chr15 51404985 51405022 -52089952 + (TTG)n Simple_repeat Simple_repeat 3 39 0 5 977 2702 176 13 4 chr15 51405022 51405484 -52089490 - Lx LINE L1 -17 6637 6172 5 977 190 273 23 0 chr15 51406316 51406360 -52088614 - MIR SINE MIR -190 72 28 5 977 288 348 53 5 chr15 51408994 51409110 -52085864 + MLT1G3 LTR MaLR 89 207 -342 5 977 437 200 106 37 chr15 51409357 51409518 -52085456 + L1MA8 LINE L1 6020 6191 -100 5 977 277 296 118 0 chr15 51409987 51410122 -52084852 - L1MD LINE L1 -1434 4712 4562 5 977 373 305 61 31 chr15 51410688 51410884 -52084090 + RMER15 LTR ERVL 349 550 -25 5 977 258 216 24 3 chr15 51412424 51412506 -52082468 + B1F SINE Alu 39 119 -28 5 977 537 270 36 7 chr15 51412505 51412643 -52082331 + B1F SINE Alu 8 149 0 5 977 459 313 6 99 chr15 51412995 51413176 -52081798 + RSINE1 SINE B4 2 165 0 5 977 257 347 58 0 chr15 51413437 51413558 -52081416 - MIRc SINE MIR -39 229 102 5 977 491 0 17 0 chr15 51414869 51414928 -52080046 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 977 448 289 117 56 chr15 51415560 51415986 -52078988 + L1MEc LINE L1 32 483 -5917 5 977 488 259 256 26 chr15 51416169 51416393 -52078581 + B4A SINE B4 9 284 -8 5 977 702 0 0 0 chr15 51416405 51416483 -52078491 + (GTTTG)n Simple_repeat Simple_repeat 2 79 0 5 977 391 316 153 46 chr15 51416485 51417118 -52077856 + L1MEc LINE L1 773 1473 -4927 5 977 337 341 89 22 chr15 51417307 51417577 -52077397 - L2a LINE L2 -205 3221 2934 5 977 419 324 104 58 chr15 51417672 51418024 -52076950 + MLT1E2 LTR MaLR 7 377 -128 5 977 306 0 0 0 chr15 51418270 51418304 -52076670 + (CATA)n Simple_repeat Simple_repeat 2 35 0 5 977 428 359 0 6 chr15 51419130 51419287 -52075687 - MIRb SINE MIR -73 195 40 5 977 417 39 0 0 chr15 51419325 51419376 -52075598 + (TC)n Simple_repeat Simple_repeat 1 51 0 5 977 237 146 0 0 chr15 51419521 51419569 -52075405 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 977 809 207 29 0 chr15 51419917 51420057 -52074917 + B1_Mur4 SINE Alu 1 144 -6 5 977 1051 122 0 16 chr15 51420070 51420253 -52074721 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 977 213 299 130 30 chr15 51420341 51420441 -52074533 + MIRb SINE MIR 133 242 -26 5 977 581 287 78 129 chr15 51420842 51421229 -52073745 - ORR1E LTR MaLR 0 370 4 5 977 247 304 70 43 chr15 51421612 51421752 -52073222 + MIRc SINE MIR 24 166 -102 5 977 214 370 10 20 chr15 51422512 51422614 -52072360 + L2b LINE L2 3051 3151 -224 5 977 22 0 0 0 chr15 51424953 51424975 -52069999 + AT_rich Low_complexity Low_complexity 1 22 0 5 977 1099 222 147 42 chr15 51425499 51425832 -52069142 - ORR1D1 LTR MaLR -1 373 6 5 977 280 292 14 0 chr15 51427122 51427194 -52067780 - MER58A DNA MER1_type -151 73 1 5 977 561 88 0 0 chr15 51428778 51428858 -52066116 + (TTGG)n Simple_repeat Simple_repeat 2 81 0 5 977 671 338 5 10 chr15 51428876 51429082 -52065892 - ID_B1 SINE B4 -6 218 14 5 977 421 149 44 53 chr15 51430338 51430451 -52064523 - Lx9 LINE L1 0 7644 7533 5 977 375 23 0 0 chr15 51430615 51430659 -52064315 + (GGTTG)n Simple_repeat Simple_repeat 5 48 0 5 977 465 19 0 0 chr15 51430998 51431052 -52063922 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 977 816 232 7 0 chr15 51431052 51431190 -52063784 - RSINE1 SINE B4 -24 141 3 5 977 578 273 6 19 chr15 51432273 51432430 -52062544 - MER5B DNA MER1_type -7 171 17 5 977 25 0 0 0 chr15 51433064 51433089 -52061885 + GC_rich Low_complexity Low_complexity 1 25 0 5 977 285 151 0 0 chr15 51433626 51433679 -52061295 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 977 328 243 84 19 chr15 51433831 51433986 -52060988 - MER96B DNA hAT -216 201 37 5 977 518 329 43 12 chr15 51434854 51435017 -52059957 - MamSINE1 SINE tRNA -35 255 88 5 977 1127 253 26 15 chr15 51435339 51435608 -52059366 + Lx8 LINE L1 6937 7208 -265 5 977 333 0 0 0 chr15 51435666 51435703 -52059271 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 977 225 0 0 0 chr15 51435703 51435727 -52059247 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 977 189 107 0 0 chr15 51435744 51435772 -52059202 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 977 285 51 0 0 chr15 51435773 51435812 -52059162 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 6 977 23 54 0 0 chr15 51435918 51435955 -52059019 + AT_rich Low_complexity Low_complexity 1 37 0 6 977 458 346 39 0 chr15 51435958 51436111 -52058863 + RSINE1 SINE B4 1 159 -6 6 977 210 171 0 0 chr15 51437300 51437335 -52057639 + T-rich Low_complexity Low_complexity 1 35 0 6 977 203 163 47 0 chr15 51437930 51437973 -52057001 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 6 977 657 110 0 0 chr15 51438016 51438116 -52056858 + (TG)n Simple_repeat Simple_repeat 1 100 0 6 977 475 362 19 26 chr15 51438120 51438276 -52056698 - RSINE1 SINE B4 -10 155 1 6 977 26 64 0 0 chr15 51438277 51438324 -52056650 + AT_rich Low_complexity Low_complexity 1 47 0 6 977 201 213 0 0 chr15 51438384 51438431 -52056543 + (CATA)n Simple_repeat Simple_repeat 2 48 0 6 977 414 0 0 0 chr15 51438434 51438480 -52056494 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 977 38138 35 0 0 chr15 51438904 51444582 -52050392 + L1Md_Gf LINE L1 31 5805 -81 6 977 393 39 0 0 chr15 51444695 51444746 -52050228 + (ACTG)n Simple_repeat Simple_repeat 4 54 0 6 977 2045 173 60 9 chr15 51445708 51446057 -52048917 + ORR1B2 LTR MaLR 1 367 0 6 977 407 332 121 36 chr15 51447268 51447599 -52047375 - MLT1L LTR MaLR -217 393 35 6 977 282 323 0 75 chr15 51448232 51448339 -52046635 - PB1D10 SINE Alu -18 99 1 6 977 274 354 108 0 chr15 51448518 51448648 -52046326 - MIRb SINE MIR -120 148 5 6 977 229 312 47 0 chr15 51449075 51449139 -52045835 + LTR16A1 LTR ERVL 15 81 -375 6 977 3823 55 4 0 chr15 51449139 51449609 -52045365 + L1Md_F2 LINE L1 5115 5586 -297 6 977 8508 49 6 6 chr15 51449610 51450599 -52044375 + L1Md_F2 LINE L1 5588 6576 -6 6 977 207 0 0 0 chr15 51450888 51450911 -52044063 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 6 977 705 161 70 42 chr15 51450918 51451061 -52043913 - B1_Mur2 SINE Alu -1 148 2 6 977 297 274 15 127 chr15 51451161 51451187 -52043787 + MT2B LTR ERVL 145 155 -446 6 977 664 244 0 0 chr15 51451187 51451306 -52043668 + B1_Mur3 SINE Alu 2 120 -29 6 977 756 118 0 0 chr15 51451311 51451447 -52043527 + (TC)n Simple_repeat Simple_repeat 2 137 0 6 977 306 0 0 0 chr15 51451447 51451481 -52043493 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 977 2402 140 11 8 chr15 51452028 51452402 -52042572 + Lx LINE L1 6279 6653 -1 6 977 314 314 0 8 chr15 51453742 51453861 -52041113 + (TATG)n Simple_repeat Simple_repeat 1 118 0 6 977 276 111 0 0 chr15 51453870 51453915 -52041059 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 977 480 221 0 33 chr15 51453932 51454214 -52040760 + (TG)n Simple_repeat Simple_repeat 1 272 0 6 977 371 162 26 26 chr15 51454228 51454304 -52040670 - HAL1-3A_ME LINE L1 -830 2028 1953 6 977 1693 32 5 0 chr15 51456346 51456533 -52038441 - B2_Mm1t SINE B2 -4 189 2 6 977 1111 97 14 0 chr15 51456703 51456847 -52038127 + B1_Mus1 SINE Alu 1 146 -2 6 977 212 65 0 31 chr15 51456847 51456879 -52038095 + (GAA)n Simple_repeat Simple_repeat 1 31 0 6 977 311 113 0 16 chr15 51456879 51456942 -52038032 + (CAA)n Simple_repeat Simple_repeat 2 63 0 6 977 207 0 0 0 chr15 51457270 51457293 -52037681 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 977 282 29 0 0 chr15 51457732 51457767 -52037207 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 977 645 229 13 77 chr15 51458181 51458337 -52036637 + ID_B1 SINE B4 78 223 -1 6 977 269 284 133 22 chr15 51458351 51458441 -52036533 - MIR SINE MIR -120 142 43 6 977 322 232 0 137 chr15 51458839 51458934 -52036040 + ID_B1 SINE B4 134 215 -9 6 977 300 286 31 85 chr15 51459569 51459699 -52035275 + MIRm SINE MIR 65 187 -89 6 977 485 179 20 50 chr15 51459816 51459916 -52035058 + B1_Mur3 SINE Alu 52 148 -1 6 977 696 185 0 0 chr15 51460437 51460860 -52034114 + GA-rich Low_complexity Low_complexity 1 423 0 6 977 725 266 11 40 chr15 51461360 51461536 -52033438 + ID_B1 SINE B4 54 224 0 6 977 395 339 8 50 chr15 51462434 51462555 -52032419 + B4 SINE B4 2 117 -175 6 977 854 209 42 11 chr15 51462558 51462747 -52032227 - Lx7 LINE L1 -622 7074 6880 6 977 274 278 53 53 chr15 51462746 51462841 -52032133 + Lx7 LINE L1 7100 7194 -502 6 977 734 255 170 38 chr15 51463976 51464212 -52030762 + Lx9 LINE L1 7218 7471 -173 6 977 273 98 0 0 chr15 51464212 51464253 -52030721 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 977 734 255 170 38 chr15 51464253 51464387 -52030587 + Lx9 LINE L1 7472 7636 -8 6 977 183 259 0 0 chr15 51464426 51464484 -52030490 + (TATATG)n Simple_repeat Simple_repeat 6 63 0 6 977 1123 284 178 23 chr15 51464497 51464963 -52030011 + Lx8 LINE L1 6825 7353 -120 6 977 243 0 0 0 chr15 51464963 51464990 -52029984 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 6 977 1123 284 178 23 chr15 51464990 51465079 -52029895 + Lx8 LINE L1 7354 7465 -8 6 977 23 33 0 0 chr15 51465187 51465217 -52029757 + AT_rich Low_complexity Low_complexity 1 30 0 6 977 2739 61 6 0 chr15 51465589 51465917 -52029057 + L1Md_F2 LINE L1 6251 6580 -2 6 977 356 289 0 0 chr15 51466015 51466112 -52028862 + PB1D10 SINE Alu 21 117 0 6 977 180 111 0 0 chr15 51467008 51467035 -52027939 + (A)n Simple_repeat Simple_repeat 1 27 0 6 977 24 0 0 0 chr15 51468340 51468364 -52026610 + AT_rich Low_complexity Low_complexity 1 24 0 6 977 537 247 135 73 chr15 51469191 51469436 -52025538 - MLT1A0 LTR MaLR 0 365 106 6 977 351 340 188 15 chr15 51470191 51470388 -52024586 - LTR33 LTR ERVL -261 254 24 6 977 929 289 4 33 chr15 51470894 51471137 -52023837 - B4A SINE B4 -56 236 1 6 977 513 280 106 0 chr15 51472815 51472947 -52022027 + B1F SINE Alu 1 146 -3 6 977 615 121 0 0 chr15 51472965 51473064 -52021910 + (TAGG)n Simple_repeat Simple_repeat 1 99 0 6 977 359 311 99 20 chr15 51473133 51473284 -52021690 - HAL1-3A_ME LINE L1 -415 2443 2281 6 977 276 294 73 0 chr15 51473293 51473361 -52021613 - PB1D10 SINE Alu -28 89 17 6 977 361 276 190 0 chr15 51473560 51473676 -52021298 + MLT1B LTR MaLR 8 145 -245 6 977 1356 219 97 15 chr15 51473711 51474041 -52020933 + MTE2a LTR MaLR 6 362 -17 6 977 744 261 98 8 chr15 51474111 51474347 -52020627 + MLT1B LTR MaLR 132 388 -2 6 977 815 273 10 20 chr15 51474978 51475176 -52019798 - B3 SINE B2 -19 197 2 6 977 465 250 11 0 chr15 51476855 51476947 -52018027 + ID_B1 SINE B4 109 201 -23 6 977 231 118 0 0 chr15 51476917 51476951 -52018023 + PB1D7 SINE Alu 65 98 -22 6 977 456 35 0 0 chr15 51476957 51477015 -52017959 + (TA)n Simple_repeat Simple_repeat 2 59 0 6 977 253 359 7 63 chr15 51477343 51477495 -52017479 - MIR SINE MIR -110 152 16 6 977 383 306 104 0 chr15 51477504 51477648 -52017326 - MER20 DNA MER1_type -6 213 55 6 977 376 253 0 0 chr15 51478266 51478345 -52016629 - PB1D10 SINE Alu -20 97 19 6 977 318 319 75 0 chr15 51478268 51478362 -52016612 - ID_B1 SINE B4 -48 176 76 6 977 333 312 26 43 chr15 51479978 51480095 -52014879 - B4A SINE B4 -12 280 166 6 977 261 109 0 0 chr15 51480203 51480249 -52014725 + (CAGA)n Simple_repeat Simple_repeat 1 46 0 6 977 323 250 31 39 chr15 51480473 51480602 -52014372 + Lx7 LINE L1 7566 7693 -3 6 977 339 25 0 0 chr15 51480692 51480732 -52014242 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 6 977 3072 81 8 5 chr15 51480784 51481179 -52013795 + MTA_Mm LTR MaLR 1 396 0 6 977 8536 78 14 5 chr15 51481179 51482267 -52012707 + MTA_Mm-int LTR MaLR 1 1098 0 6 977 3215 68 5 5 chr15 51482267 51482663 -52012311 + MTA_Mm LTR MaLR 1 396 0 6 977 254 335 103 73 chr15 51485518 51485750 -52009224 - ORR1E LTR MaLR -113 246 8 6 977 531 0 0 0 chr15 51485953 51486012 -52008962 + (TC)n Simple_repeat Simple_repeat 1 59 0 6 977 387 0 0 0 chr15 51486012 51486054 -52008920 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 977 710 98 0 43 chr15 51486461 51486600 -52008374 + (TTCC)n Simple_repeat Simple_repeat 3 135 0 6 977 235 312 0 0 chr15 51486607 51486671 -52008303 - PB1D10 SINE Alu -8 109 46 6 977 429 66 0 0 chr15 51487397 51487458 -52007516 + (TATG)n Simple_repeat Simple_repeat 4 64 0 6 977 210 154 0 0 chr15 51487517 51487556 -52007418 + T-rich Low_complexity Low_complexity 2 40 0 6 977 927 67 0 0 chr15 51487556 51487676 -52007298 - B1_Mm SINE Alu 0 147 28 6 977 246 319 31 21 chr15 51488529 51488625 -52006349 + MER20 DNA MER1_type 119 215 -4 6 977 3488 166 138 16 chr15 51488871 51489580 -52005394 + RLTR25B LTR ERVK 1 796 -232 6 977 621 143 181 8 chr15 51489562 51489689 -52005285 + RLTR25B LTR ERVK 955 1103 0 6 977 3320 40 20 0 chr15 51489809 51490211 -52004763 - L1_Mus2 LINE L1 -492 6074 5665 6 977 2631 44 9 9 chr15 51490211 51490533 -52004441 + L1_Mus2 LINE L1 6245 6566 0 6 977 480 270 64 21 chr15 51490881 51491021 -52003953 - B1F SINE Alu 0 149 4 6 977 1233 68 0 0 chr15 51491340 51491487 -52003487 + B1_Mm SINE Alu 1 147 0 6 977 1113 275 83 20 chr15 51491717 51492162 -52002812 + L1MA6 LINE L1 5624 6096 -204 6 977 718 258 16 11 chr15 51492473 51492661 -52002313 + L1MA6 LINE L1 6111 6299 -1 6 977 360 0 0 0 chr15 51492852 51492892 -52002082 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 977 729 292 64 11 chr15 51493109 51493296 -52001678 + B4 SINE B4 90 286 -6 6 977 1205 171 48 0 chr15 51493499 51493709 -52001265 + URR1A DNA MER1_type 7 226 0 6 977 1423 289 29 46 chr15 51493709 51494234 -52000740 - MT2A LTR ERVL -16 517 2 6 977 240 350 66 36 chr15 51494598 51494764 -52000210 - L2 LINE L2 -446 2973 2803 6 977 23 33 0 0 chr15 51494768 51494798 -52000176 + AT_rich Low_complexity Low_complexity 1 30 0 6 977 590 289 0 0 chr15 51494798 51494919 -52000055 - RSINE1 SINE B4 -8 157 37 6 977 234 0 0 0 chr15 51494929 51494955 -52000019 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 6 977 573 55 0 0 chr15 51494955 51495028 -51999946 + (GGGA)n Simple_repeat Simple_repeat 3 75 0 6 977 219 220 0 0 chr15 51495028 51495078 -51999896 + GA-rich Low_complexity Low_complexity 1 50 0 6 977 207 100 0 0 chr15 51495076 51495106 -51999868 + (ATG)n Simple_repeat Simple_repeat 2 31 0 6 977 788 323 109 32 chr15 51496337 51496804 -51998170 + MER90 LTR ERV1 3 505 -70 7 977 215 222 0 0 chr15 51497289 51497334 -51997640 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 7 977 207 0 0 0 chr15 51497491 51497514 -51997460 + (TA)n Simple_repeat Simple_repeat 1 23 0 7 977 26 0 0 0 chr15 51498358 51498384 -51996590 + AT_rich Low_complexity Low_complexity 1 26 0 7 977 501 268 0 9 chr15 51498483 51498596 -51996378 + PB1D7 SINE Alu 4 115 -5 7 977 336 24 0 0 chr15 51500789 51500830 -51994144 + (CTG)n Simple_repeat Simple_repeat 2 42 0 1 977 180 0 0 0 chr15 51502040 51502060 -51992914 + (T)n Simple_repeat Simple_repeat 1 20 0 2 977 29 0 0 0 chr15 51502136 51502165 -51992809 + AT_rich Low_complexity Low_complexity 1 29 0 3 977 414 0 0 0 chr15 51504353 51504399 -51990575 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 977 228 35 0 0 chr15 51507619 51507648 -51987326 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 977 1272 144 0 5 chr15 51508917 51509113 -51985861 - B2_Mm2 SINE B2 0 195 1 6 977 2681 250 14 62 chr15 51509154 51509844 -51985130 + RMER1C Other Other 667 1323 -19 7 977 255 93 0 0 chr15 51509848 51509891 -51985083 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 8 977 591 15 0 0 chr15 51510133 51510201 -51984773 + (TC)n Simple_repeat Simple_repeat 1 68 0 9 978 443 231 130 0 chr15 51511773 51511881 -51983093 + ID_B1 SINE B4 84 205 -19 1 978 360 239 51 125 chr15 51511881 51511918 -51983056 + PB1D10 SINE Alu 3 141 -6 1 978 1266 90 0 0 chr15 51511920 51512098 -51982876 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 1 978 207 0 0 0 chr15 51513763 51513786 -51981188 + (A)n Simple_repeat Simple_repeat 1 23 0 1 978 180 0 0 0 chr15 51514299 51514319 -51980655 + (A)n Simple_repeat Simple_repeat 1 20 0 1 978 2598 146 138 14 chr15 51514373 51514893 -51980081 + RMER4B LTR ERVK 1 585 0 1 978 252 223 158 11 chr15 51515070 51515165 -51979809 - MER103 DNA DNA -48 118 10 1 978 894 274 19 9 chr15 51516205 51516415 -51978559 + ID_B1 SINE B4 5 216 -8 1 978 180 111 0 0 chr15 51516708 51516735 -51978239 + (GGGAA)n Simple_repeat Simple_repeat 4 30 0 1 978 1453 87 0 5 chr15 51517445 51517641 -51977333 - B2_Mm2 SINE B2 0 195 1 1 978 775 225 105 0 chr15 51517848 51518039 -51976935 + B3 SINE B2 1 211 -5 2 978 1144 284 129 23 chr15 51520674 51520759 -51974215 + MT2A LTR ERVL 10 94 -439 2 978 2531 145 0 47 chr15 51520759 51521186 -51973788 - MTB_Mm LTR MaLR 0 407 1 2 978 1144 284 129 23 chr15 51521186 51521572 -51973402 + MT2A LTR ERVL 95 531 -2 2 978 192 40 0 0 chr15 51521731 51521756 -51973218 + (CACCC)n Simple_repeat Simple_repeat 4 28 0 2 978 500 269 102 21 chr15 51522383 51522569 -51972405 + MLT1A0 LTR MaLR 85 285 -80 2 978 378 0 0 0 chr15 51522813 51522855 -51972119 + (TTA)n Simple_repeat Simple_repeat 1 42 0 2 978 2176 82 0 64 chr15 51522856 51523182 -51971792 - L1_Mus2 LINE L1 -11 6555 6251 2 978 364 204 50 8 chr15 51524980 51525101 -51969873 + Lx4B LINE L1 6895 7023 -35 2 978 333 0 0 0 chr15 51525107 51525144 -51969830 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 2 978 321 198 43 35 chr15 51525336 51525433 -51969541 + MTEa LTR MaLR 282 377 -2 2 978 230 282 155 0 chr15 51525560 51525631 -51969343 + PB1 SINE Alu 16 97 -30 3 978 456 288 68 40 chr15 51525866 51526106 -51968868 - MLT1A LTR MaLR -19 371 138 3 978 499 283 109 25 chr15 51526685 51526961 -51968013 - L2 LINE L2 -483 2936 2638 3 978 266 342 85 64 chr15 51526965 51527293 -51967681 + MER2 DNA MER2_type 6 340 -5 3 978 294 222 12 24 chr15 51528540 51528623 -51966351 - ID4_ SINE ID -1 82 1 3 978 1036 253 94 34 chr15 51529154 51529506 -51965468 + ORR1D1 LTR MaLR 1 373 -1 3 978 366 315 28 0 chr15 51529585 51529693 -51965281 + ID_B1 SINE B4 82 192 -32 3 978 306 303 178 53 chr15 51529796 51530043 -51964931 + MLT1A0 LTR MaLR 27 304 -61 3 978 8645 30 3 0 chr15 51530049 51531235 -51963739 - L1Md_F2 LINE L1 0 6582 5393 3 978 207 0 0 0 chr15 51531488 51531511 -51963463 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 3 978 231 36 0 0 chr15 51531548 51531576 -51963398 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 978 311 329 66 83 chr15 51531592 51531834 -51963140 - MLT2D LTR ERVL -83 331 94 4 978 382 315 0 9 chr15 51531841 51531950 -51963024 + PB1D10 SINE Alu 2 109 -8 4 978 202 267 0 32 chr15 51532642 51532704 -51962270 + (TATG)n Simple_repeat Simple_repeat 3 62 0 4 978 293 333 0 0 chr15 51532706 51532778 -51962196 - B4 SINE B4 -2 290 219 4 978 2486 152 35 5 chr15 51532916 51533598 -51961376 + L1_Mur2 LINE L1 816 1526 -4351 4 978 282 245 58 19 chr15 51533609 51533713 -51961261 - Lx9 LINE L1 -7 7637 7530 4 978 756 281 47 0 chr15 51533734 51533926 -51961048 - B4 SINE B4 -91 201 1 4 978 533 293 6 51 chr15 51534254 51534412 -51960562 + RSINE1 SINE B4 1 151 -14 4 978 537 211 0 0 chr15 51535096 51535224 -51959750 + (TA)n Simple_repeat Simple_repeat 2 129 0 4 978 538 314 102 70 chr15 51535810 51536399 -51958575 + L1ME3A LINE L1 5330 5937 -236 4 978 1212 206 5 5 chr15 51536411 51536626 -51958348 + B3 SINE B2 2 216 0 5 978 200 280 0 0 chr15 51536776 51536826 -51958148 + (TGGA)n Simple_repeat Simple_repeat 4 53 0 5 978 515 294 75 82 chr15 51538170 51538488 -51956486 + ORR1E LTR MaLR 1 316 -43 5 978 225 273 15 0 chr15 51538559 51538625 -51956349 - MIRc SINE MIR -159 109 43 5 978 2959 171 52 79 chr15 51539249 51539780 -51955194 - RMER20B LTR ERVK 0 627 79 5 978 1213 34 0 14 chr15 51539780 51539928 -51955046 + B1_Mus2 SINE Alu 2 147 0 5 978 2959 171 52 79 chr15 51539928 51539953 -51955021 - RMER20B LTR ERVK -549 78 78 5 978 1064 96 6 0 chr15 51539953 51540130 -51954844 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 5 978 2959 171 52 79 chr15 51540130 51540207 -51954767 - RMER20B LTR ERVK -549 78 10 5 978 484 193 9 9 chr15 51540307 51540422 -51954552 + GA-rich Low_complexity Low_complexity 3 117 0 5 978 306 0 0 0 chr15 51542201 51542235 -51952739 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 978 23 0 0 0 chr15 51542607 51542630 -51952344 + AT_rich Low_complexity Low_complexity 1 23 0 6 978 561 52 0 0 chr15 51543148 51543225 -51951749 + (CA)n Simple_repeat Simple_repeat 2 78 0 6 978 207 0 0 0 chr15 51543225 51543247 -51951727 + (GA)n Simple_repeat Simple_repeat 2 24 0 6 978 813 135 0 0 chr15 51543862 51544025 -51950949 + (TC)n Simple_repeat Simple_repeat 1 163 0 6 978 270 56 0 0 chr15 51545613 51545649 -51949325 + (TGGA)n Simple_repeat Simple_repeat 2 37 0 6 978 1032 271 78 12 chr15 51546617 51546950 -51948024 - ORR1D2 LTR MaLR -2 368 14 6 978 1754 338 65 33 chr15 51547717 51548568 -51946406 - Lx8 LINE L1 -3 7470 6593 6 978 407 335 18 47 chr15 51549931 51550100 -51944874 + RSINE1 SINE B4 2 165 0 6 978 293 352 29 29 chr15 51550142 51550420 -51944554 + L1ME4a LINE L1 5605 5882 -242 6 978 797 272 0 20 chr15 51550470 51550665 -51944309 + B3A SINE B2 1 191 -7 6 978 468 128 0 0 chr15 51550670 51550748 -51944226 + (GGGA)n Simple_repeat Simple_repeat 3 80 0 7 978 198 0 0 0 chr15 51551472 51551494 -51943480 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 7 978 290 293 37 89 chr15 51551518 51551709 -51943265 + MLT1H LTR MaLR 366 546 -3 7 978 595 223 6 18 chr15 51551908 51552077 -51942897 + GA-rich Low_complexity Low_complexity 2 168 0 7 978 217 203 0 48 chr15 51552283 51552345 -51942629 + CT-rich Low_complexity Low_complexity 2 60 0 7 978 210 286 126 15 chr15 51552534 51552669 -51942305 - MIRc SINE MIR -6 262 113 7 978 1105 198 14 9 chr15 51553673 51553887 -51941087 + B3 SINE B2 2 216 0 7 978 218 351 7 22 chr15 51554245 51554382 -51940592 + GA-rich Low_complexity Low_complexity 1 135 0 7 978 993 263 40 105 chr15 51555012 51555268 -51939706 - MTE2b LTR MaLR 0 379 115 7 978 483 18 0 0 chr15 51555268 51555324 -51939650 + (TTTTG)n Simple_repeat Simple_repeat 3 58 0 7 978 912 48 94 31 chr15 51555324 51555452 -51939522 - B1_Mus1 SINE Alu -12 136 1 8 978 993 263 40 105 chr15 51555452 51555594 -51939380 - MTE2b LTR MaLR -265 114 7 7 978 291 376 13 32 chr15 51555648 51555802 -51939172 + MLT1I LTR MaLR 63 213 -198 8 978 235 352 40 16 chr15 51556226 51556350 -51938624 + MIR SINE MIR 19 145 -117 8 978 1274 89 56 0 chr15 51556541 51556720 -51938254 + B2_Mm2 SINE B2 1 189 -6 8 978 282 56 0 0 chr15 51556720 51556756 -51938218 + (GGA)n Simple_repeat Simple_repeat 1 36 0 8 978 353 77 0 0 chr15 51556761 51556813 -51938161 - URR1B DNA MER1_type -88 137 86 8 978 482 278 0 0 chr15 51557622 51557737 -51937237 - MLT1B LTR MaLR 0 390 276 8 978 442 273 105 30 chr15 51557749 51557949 -51937025 - MLT1A LTR MaLR 0 374 160 8 978 194 379 19 56 chr15 51558420 51558582 -51936392 + MIRb SINE MIR 29 184 -84 8 978 675 270 48 4 chr15 51559424 51559611 -51935363 - B3A SINE B2 -27 189 1 8 978 364 289 24 48 chr15 51559954 51560121 -51934853 + RSINE1 SINE B4 3 165 0 9 978 267 31 0 0 chr15 51560441 51560473 -51934501 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 9 978 325 194 0 0 chr15 51560473 51560525 -51934449 - PB1D10 SINE Alu -9 108 57 9 978 208 231 46 0 chr15 51560806 51560871 -51934103 - MIR SINE MIR -112 150 83 9 978 236 260 41 154 chr15 51562047 51562170 -51932804 - MIRb SINE MIR -114 154 46 9 978 477 34 0 0 chr15 51563194 51563253 -51931721 + (TG)n Simple_repeat Simple_repeat 2 60 0 9 978 361 309 71 32 chr15 51563417 51563571 -51931403 - RSINE1 SINE B4 -2 163 4 9 978 808 182 7 0 chr15 51563792 51563935 -51931039 + B1_Mus1 SINE Alu 5 148 0 9 978 548 275 132 5 chr15 51564457 51564647 -51930327 + ID_B1 SINE B4 2 215 -9 9 978 3373 241 74 8 chr15 51564728 51565497 -51929477 + Lx6 LINE L1 6634 7453 -7 9 978 465 342 18 42 chr15 51565562 51565730 -51929244 + MTE2b LTR MaLR 51 214 -165 1 978 243 269 135 0 chr15 51565726 51565830 -51929144 - MLT2C2 LTR ERVL -16 543 426 1 978 259 245 168 47 chr15 51566282 51566389 -51928585 + Tigger5 DNA MER2_type 2282 2401 -5 1 978 2170 150 63 15 chr15 51566407 51566806 -51928168 - MTC LTR MaLR -1 420 3 1 978 395 274 14 56 chr15 51567016 51567135 -51927839 - MLT1B LTR MaLR -73 317 200 1 978 531 31 0 0 chr15 51567135 51567200 -51927774 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 1 978 395 274 14 56 chr15 51567200 51567223 -51927751 - MLT1B LTR MaLR -191 199 181 1 978 424 297 50 22 chr15 51567277 51567456 -51927518 - MLT1B LTR MaLR -204 186 3 1 978 202 222 0 0 chr15 51568456 51568501 -51926473 + (TTGG)n Simple_repeat Simple_repeat 2 46 0 1 978 737 169 48 21 chr15 51568683 51568828 -51926146 - B1_Mur4 SINE Alu -1 149 1 1 978 1672 238 60 29 chr15 51568833 51569418 -51925556 - RCHARR1 DNA MER1_type -1 973 371 1 978 894 257 5 27 chr15 51569601 51569781 -51925193 - B3 SINE B2 0 216 41 1 978 4260 27 0 0 chr15 51569781 51570263 -51924711 - LTRIS_Mm LTR ERV1 0 482 1 1 978 894 257 5 27 chr15 51570263 51570302 -51924672 - B3 SINE B2 -176 40 2 1 978 1652 124 41 118 chr15 51570322 51570688 -51924286 - MTC LTR MaLR 0 421 84 1 978 1372 101 5 0 chr15 51570703 51570891 -51924083 - B2_Mm1t SINE B2 -4 189 1 1 978 333 103 14 68 chr15 51570907 51570980 -51923994 - RMER1C Other Other 0 1342 1274 1 978 864 114 0 0 chr15 51571032 51571163 -51923811 + (GGGA)n Simple_repeat Simple_repeat 3 133 0 1 978 200 204 0 75 chr15 51571165 51571218 -51923756 + MIR SINE MIR 101 149 -59 1 978 675 270 115 80 chr15 51572577 51572952 -51922022 + MLT1B LTR MaLR 3 390 0 1 978 222 37 0 0 chr15 51573056 51573083 -51921891 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 978 3080 57 7 47 chr15 51573098 51573522 -51921452 - L1_Mus2 LINE L1 -3 6563 6157 1 978 694 145 15 53 chr15 51573525 51573656 -51921318 + B1_Mur3 SINE Alu 19 144 -5 1 978 198 209 0 0 chr15 51573656 51573699 -51921275 + GA-rich Low_complexity Low_complexity 6 48 0 1 978 528 16 0 0 chr15 51573954 51574015 -51920959 + (GA)n Simple_repeat Simple_repeat 1 61 0 1 978 257 337 163 0 chr15 51574084 51574268 -51920706 + MIR SINE MIR 25 238 -24 1 978 983 247 167 12 chr15 51574464 51574800 -51920174 - MTD LTR MaLR -14 405 18 1 978 274 339 46 30 chr15 51575516 51575647 -51919327 + MIRb SINE MIR 56 188 -80 1 978 765 290 18 23 chr15 51575790 51576009 -51918965 + ID_B1 SINE B4 6 223 -1 1 978 438 69 0 0 chr15 51576009 51576067 -51918907 + (GGGA)n Simple_repeat Simple_repeat 1 58 0 1 978 316 243 54 0 chr15 51576667 51576741 -51918233 + B4A SINE B4 1 78 -214 1 978 483 18 0 0 chr15 51576770 51576826 -51918148 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 978 221 341 52 22 chr15 51578877 51579012 -51915962 - MIR SINE MIR -63 199 61 1 978 453 346 48 32 chr15 51579501 51579752 -51915222 + LTR88c LTR Genie? 3 257 -605 1 978 208 200 0 0 chr15 51580193 51580233 -51914741 - L2b LINE L2 -4 3371 3332 1 978 245 283 43 11 chr15 51580480 51580573 -51914401 + MIRm SINE MIR 168 263 -13 1 978 1219 92 28 28 chr15 51580780 51580959 -51914015 + B2_Mm1t SINE B2 1 179 -14 1 978 319 110 353 29 chr15 51580991 51581093 -51913881 + B2_Mm2 SINE B2 47 181 -14 1 978 387 255 119 126 chr15 51581314 51581624 -51913350 - ORR1E LTR MaLR -4 355 48 1 978 234 156 0 0 chr15 51582054 51582099 -51912875 + A-rich Low_complexity Low_complexity 1 45 0 1 978 1056 179 119 0 chr15 51582284 51582485 -51912489 - URR1A DNA MER1_type -1 225 1 1 978 2562 68 44 6 chr15 51582523 51582863 -51912111 + L1Md_F2 LINE L1 6230 6582 0 1 978 478 248 44 0 chr15 51583028 51583165 -51911809 + MLT1A LTR MaLR 18 160 -214 1 978 526 268 81 6 chr15 51583166 51583339 -51911635 + RMER1A Other Other 19 204 -826 1 978 3167 167 108 27 chr15 51583311 51583837 -51911137 + RMER1B Other Other 364 919 -147 1 978 261 0 0 0 chr15 51583837 51583866 -51911108 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 978 3167 167 108 27 chr15 51583866 51583979 -51910995 + RMER1B Other Other 920 1055 -11 1 978 702 0 0 0 chr15 51583986 51584064 -51910910 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 1 978 267 281 74 104 chr15 51584078 51584241 -51910733 + MLT1A LTR MaLR 190 347 -27 1 978 237 266 62 18 chr15 51584748 51584861 -51910113 - MIRm SINE MIR -99 177 60 1 978 1013 138 6 0 chr15 51585411 51585578 -51909396 + URR1A DNA MER1_type 59 226 0 1 978 295 356 88 43 chr15 51586144 51586610 -51908364 + L2b LINE L2 2333 2819 -600 1 978 231 114 0 0 chr15 51586620 51586655 -51908319 + (TCTCCC)n Simple_repeat Simple_repeat 1 35 0 1 978 297 0 0 0 chr15 51586678 51586711 -51908263 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 978 186 374 0 80 chr15 51586840 51586965 -51908009 + L2b LINE L2 3047 3161 -214 1 978 995 282 88 29 chr15 51587372 51587781 -51907193 - MLT1D LTR MaLR 0 505 73 1 978 991 238 81 21 chr15 51587817 51588152 -51906822 - Charlie1b DNA MER1_type -51 472 118 1 978 302 350 30 24 chr15 51588502 51588669 -51906305 + LTR16B2 LTR ERVL 279 446 -16 1 978 237 380 0 0 chr15 51589445 51589524 -51905450 - MLT1J LTR MaLR -198 314 236 1 978 180 241 47 24 chr15 51590087 51590172 -51904802 + MIRb SINE MIR 105 191 -77 1 978 1418 289 41 50 chr15 51590345 51590887 -51904087 + Lx8 LINE L1 6930 7466 -7 1 978 611 248 60 0 chr15 51591472 51591605 -51903369 + B1_Mur3 SINE Alu 3 143 -6 1 978 812 80 16 0 chr15 51592593 51592718 -51902256 + (TAGA)n Simple_repeat Simple_repeat 3 129 0 1 978 519 216 0 0 chr15 51594827 51594943 -51900031 + GA-rich Low_complexity Low_complexity 1 116 0 1 978 1095 139 0 0 chr15 51594945 51595125 -51899849 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 978 1277 270 65 37 chr15 51595184 51595696 -51899278 - RLTR20A2 LTR ERVK -52 526 1 1 978 221 267 69 0 chr15 51595749 51595850 -51899124 - MIRb SINE MIR -17 251 144 1 978 668 132 0 0 chr15 51595863 51595969 -51899005 - B1_Mur4 SINE Alu 0 150 45 1 978 191 276 26 0 chr15 51596848 51596924 -51898050 + MIR SINE MIR 45 122 -140 1 978 331 336 107 0 chr15 51596962 51597093 -51897881 - RSINE1 SINE B4 -18 147 3 1 978 484 122 33 0 chr15 51597402 51597492 -51897482 + C-rich Low_complexity Low_complexity 1 93 0 1 978 286 58 58 0 chr15 51597508 51597560 -51897414 + (TCTCTG)n Simple_repeat Simple_repeat 4 58 0 1 978 295 188 33 0 chr15 51597894 51597969 -51897005 + L1MA4 LINE L1 5384 5486 -814 1 978 981 290 78 33 chr15 51598094 51598729 -51896245 + L1MA4 LINE L1 5478 6138 -1558 1 978 231 36 0 0 chr15 51598814 51598842 -51896132 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 978 261 274 186 71 chr15 51599361 51599613 -51895361 - MLT1H LTR MaLR -2 547 267 1 978 312 161 0 0 chr15 51600209 51600271 -51894703 + T-rich Low_complexity Low_complexity 5 66 0 1 978 4928 123 12 69 chr15 51601274 51602126 -51892848 + RLTR13B4 LTR ERVK 1 803 0 1 978 391 165 10 10 chr15 51602223 51602279 -51892695 + polypyrimidine Low_complexity Low_complexity 43 98 0 1 978 595 115 262 67 chr15 51602279 51602428 -51892546 - B2_Mm2 SINE B2 -15 180 3 1 978 391 165 10 10 chr15 51602428 51602469 -51892505 + polypyrimidine Low_complexity Low_complexity 2 42 0 1 978 219 105 53 0 chr15 51602481 51602538 -51892436 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 1 978 218 200 22 0 chr15 51602550 51602595 -51892379 + (TCTG)n Simple_repeat Simple_repeat 3 48 0 1 978 724 203 7 0 chr15 51602622 51602765 -51892209 - ID_B1 SINE B4 -77 147 4 1 978 3669 152 2 23 chr15 51603750 51604369 -51890605 - Lx LINE L1 0 6654 6049 1 978 292 273 0 0 chr15 51604498 51604564 -51890410 - ID4_ SINE ID -3 80 15 1 978 384 252 25 34 chr15 51604725 51604844 -51890130 + MTE2b LTR MaLR 2 119 -260 1 978 403 296 14 7 chr15 51604931 51605077 -51889897 + CT-rich Low_complexity Low_complexity 1 147 0 1 978 260 307 108 32 chr15 51605426 51605584 -51889390 + LTR16B LTR ERVL 207 376 -87 1 978 455 146 60 12 chr15 51605582 51605665 -51889309 + B1_Mm SINE Alu 60 146 -1 1 978 231 343 71 7 chr15 51607549 51607690 -51887284 + MER58A DNA MER1_type 73 222 -2 1 978 753 111 58 15 chr15 51608056 51608193 -51886781 - URR1B DNA MER1_type 0 225 83 1 978 528 163 11 0 chr15 51609755 51609847 -51885127 - B1_Mur3 SINE Alu -56 93 1 1 978 313 250 22 33 chr15 51609766 51609857 -51885117 - B4A SINE B4 -125 167 78 1 978 759 230 48 39 chr15 51613702 51613882 -51881092 + ORR1D1 LTR MaLR 1 184 -190 1 978 537 44 0 0 chr15 51613882 51613950 -51881024 + (TC)n Simple_repeat Simple_repeat 1 68 0 1 978 759 230 48 39 chr15 51613950 51613977 -51880997 + ORR1D1 LTR MaLR 185 210 -164 1 978 718 168 93 51 chr15 51614310 51614538 -51880436 + ORR1C2 LTR MaLR 148 374 -10 1 978 234 279 112 12 chr15 51615057 51615137 -51879837 + MIRm SINE MIR 178 265 -11 1 978 381 297 123 13 chr15 51615573 51615816 -51879158 + L1MA7 LINE L1 5649 5919 -384 1 978 1407 86 16 11 chr15 51616344 51616532 -51878442 - B2_Mm2 SINE B2 -5 190 2 1 978 251 167 0 69 chr15 51617216 51617274 -51877700 - ID2 SINE ID -25 58 5 1 978 244 258 47 47 chr15 51617277 51617383 -51877591 + L1M5 LINE L1 5561 5666 -458 1 978 234 180 20 20 chr15 51619034 51619085 -51875889 + PB1D9 SINE Alu 70 120 0 1 978 468 0 0 0 chr15 51620563 51620615 -51874359 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 978 221 383 27 13 chr15 51622256 51622381 -51872593 - L2a LINE L2 -13 3413 3239 1 978 791 179 42 21 chr15 51622720 51622863 -51872111 + B1_Mus2 SINE Alu 1 146 -1 1 978 216 300 0 0 chr15 51622887 51622937 -51872037 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 1 978 241 103 17 33 chr15 51624275 51624335 -51870639 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 2 978 1188 76 14 0 chr15 51624339 51624484 -51870490 - B1_Mus1 SINE Alu 0 148 2 2 978 503 235 60 0 chr15 51624584 51624714 -51870260 + Lx5 LINE L1 6773 6941 -117 2 978 362 298 0 47 chr15 51625169 51625296 -51869678 + B3A SINE B2 58 178 -20 2 978 272 91 23 0 chr15 51626032 51626076 -51868898 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 978 296 244 171 0 chr15 51627020 51627102 -51867872 + PB1D10 SINE Alu 2 97 -20 2 978 225 0 0 0 chr15 51630345 51630370 -51864604 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 978 210 118 0 0 chr15 51631002 51631036 -51863938 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 978 444 248 221 27 chr15 51631690 51631839 -51863135 + B3A SINE B2 3 180 -18 2 978 956 226 29 10 chr15 51632387 51632593 -51862381 + B3 SINE B2 3 212 -4 2 978 227 279 115 0 chr15 51632731 51632792 -51862182 + ID4_ SINE ID 2 69 -14 2 978 243 196 0 51 chr15 51633301 51633360 -51861614 + MamRep434 DNA TcMar 217 272 -154 2 978 270 281 18 0 chr15 51633809 51633866 -51861108 + B4A SINE B4 85 142 -150 2 978 317 244 11 79 chr15 51633820 51633909 -51861065 + B1F2 SINE Alu 12 94 -55 2 978 341 257 19 65 chr15 51634049 51634157 -51860817 + PB1D7 SINE Alu 17 119 -1 2 978 591 211 69 15 chr15 51635292 51635422 -51859552 + RSINE1 SINE B4 10 146 -19 2 978 805 28 19 0 chr15 51637911 51638018 -51856956 + L1Md_F3 LINE L1 6476 6584 0 2 978 188 302 0 0 chr15 51638129 51638172 -51856802 - L4 LINE RTE -6 2023 1981 2 978 194 411 94 20 chr15 51638279 51638480 -51856494 - L4 LINE RTE -204 1825 1610 2 978 559 171 184 16 chr15 51640243 51640368 -51854606 + B1_Mus1 SINE Alu 2 147 -1 2 978 351 0 0 0 chr15 51640724 51640763 -51854211 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 978 625 57 349 0 chr15 51640763 51640862 -51854112 - B1_Mus1 SINE Alu -10 138 3 2 979 207 0 0 0 chr15 51642826 51642849 -51852125 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 979 309 351 46 51 chr15 51642942 51643137 -51851837 - Charlie25 DNA MER1_type -1750 774 581 2 979 587 242 43 43 chr15 51644997 51645161 -51849813 - Lx9 LINE L1 -444 7200 7037 2 979 288 326 98 0 chr15 51645298 51645390 -51849584 + B4A SINE B4 4 104 -188 2 979 241 250 335 56 chr15 51645479 51645632 -51849342 + B3 SINE B2 5 200 -16 2 979 441 292 153 0 chr15 51646190 51646334 -51848640 + B4A SINE B4 1 166 -126 2 979 414 268 167 68 chr15 51646962 51647298 -51847676 - MLT1A LTR MaLR -4 370 2 2 979 21 0 0 0 chr15 51647827 51647848 -51847126 + AT_rich Low_complexity Low_complexity 1 21 0 2 979 21 57 0 0 chr15 51648616 51648651 -51846323 + AT_rich Low_complexity Low_complexity 1 35 0 2 979 439 322 105 0 chr15 51649880 51650032 -51844942 + ID_B1 SINE B4 2 169 -55 2 979 298 173 38 51 chr15 51650234 51650313 -51844661 + B1_Mur4 SINE Alu 66 143 -7 2 979 250 261 58 0 chr15 51650508 51650577 -51844397 - L2c LINE L2 -234 3153 3081 2 979 352 283 0 11 chr15 51651409 51651502 -51843472 + B1F SINE Alu 12 103 -46 2 979 201 135 54 0 chr15 51651517 51651554 -51843420 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 979 621 186 123 8 chr15 51651723 51651853 -51843121 + B1_Mur4 SINE Alu 5 149 -1 2 979 355 278 109 54 chr15 51652089 51652310 -51842664 + L1ME3B LINE L1 5725 5957 -283 2 979 226 290 120 9 chr15 51652427 51652535 -51842439 + L1ME3B LINE L1 6112 6231 -9 2 979 433 294 64 38 chr15 51652625 51652836 -51842138 + L1M4 LINE L1 5546 5778 -386 2 979 1607 62 16 0 chr15 51652926 51653118 -51841856 + B2_Mm2 SINE B2 1 195 0 2 979 242 177 113 0 chr15 51654630 51654692 -51840282 + Tigger7 DNA MER2_type 69 137 -2354 2 979 284 313 111 74 chr15 51654972 51655134 -51839840 - RMER5 LTR ERV1 -154 380 213 2 979 249 325 60 0 chr15 51655425 51655508 -51839466 + Tigger7 DNA MER2_type 2396 2483 -8 2 979 1068 105 0 0 chr15 51656927 51657060 -51837914 - B1_Mus1 SINE Alu -15 133 1 2 979 1568 68 16 0 chr15 51657417 51657607 -51837367 + B2_Mm2 SINE B2 3 195 0 2 979 210 71 0 0 chr15 51657805 51657833 -51837141 + (CATG)n Simple_repeat Simple_repeat 3 30 0 2 979 472 305 37 61 chr15 51658281 51658445 -51836529 + RSINE1 SINE B4 3 162 -3 2 979 291 234 6 28 chr15 51658692 51658770 -51836204 - B1_Mus2 SINE Alu -23 126 53 2 979 522 197 157 52 chr15 51658989 51659123 -51835851 - B1_Mur2 SINE Alu 0 149 2 2 979 205 106 41 41 chr15 51659177 51659226 -51835748 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 2 979 650 176 104 22 chr15 51659649 51659775 -51835199 + B1_Mur4 SINE Alu 1 140 -10 2 979 213 121 0 0 chr15 51659775 51659808 -51835166 + (TAAG)n Simple_repeat Simple_repeat 2 34 0 2 979 437 267 144 0 chr15 51660124 51660311 -51834663 + L1MD3 LINE L1 7256 7469 -526 2 979 362 286 191 21 chr15 51660709 51660898 -51834076 + L1MC3 LINE L1 7348 7568 -217 2 979 408 200 0 0 chr15 51660928 51661013 -51833961 + (TA)n Simple_repeat Simple_repeat 1 85 0 2 979 312 244 39 14 chr15 51661200 51661290 -51833684 + PB1D10 SINE Alu 11 110 -10 2 979 260 185 200 0 chr15 51661340 51661405 -51833569 + L1MD3 LINE L1 7903 7980 -15 2 979 182 309 0 68 chr15 51661517 51661576 -51833398 - L2c LINE L2 -254 3133 3079 2 979 200 31 0 59 chr15 51661850 51661884 -51833090 + (CCCCCA)n Simple_repeat Simple_repeat 4 35 0 2 979 193 273 18 0 chr15 51663408 51663463 -51831511 + L2 LINE L2 952 1007 -2412 2 979 396 266 37 52 chr15 51667062 51667197 -51827777 + ID_B1 SINE B4 90 222 -2 2 979 333 0 0 0 chr15 51667409 51667446 -51827528 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 2 979 23 0 0 0 chr15 51668549 51668572 -51826402 + AT_rich Low_complexity Low_complexity 1 23 0 2 979 261 179 56 69 chr15 51671732 51671804 -51823170 - MER58A DNA MER1_type -108 116 46 2 979 234 0 0 0 chr15 51672174 51672200 -51822774 + (A)n Simple_repeat Simple_repeat 1 26 0 2 979 219 122 49 0 chr15 51672352 51672393 -51822581 + (TCTG)n Simple_repeat Simple_repeat 4 46 0 2 979 235 243 70 133 chr15 51672493 51672621 -51822353 - B3A SINE B2 -78 120 1 2 979 594 130 77 77 chr15 51673618 51673735 -51821239 - B1_Mur3 SINE Alu 0 149 33 2 979 359 281 109 30 chr15 51675169 51675334 -51819640 + ORR1E LTR MaLR 1 178 -181 2 979 300 316 91 29 chr15 51675552 51675793 -51819181 - ORR1E LTR MaLR -86 240 32 2 979 581 207 198 17 chr15 51676079 51676256 -51818718 - B3 SINE B2 -7 209 1 2 979 23 0 0 0 chr15 51677418 51677441 -51817533 + AT_rich Low_complexity Low_complexity 1 23 0 2 979 642 250 44 44 chr15 51677447 51677627 -51817347 - B3A SINE B2 -16 182 3 2 979 489 215 49 8 chr15 51678407 51678529 -51816445 + Lx7 LINE L1 6952 7078 -618 2 979 446 249 89 18 chr15 51678527 51678831 -51816143 + Lx7 LINE L1 7232 7696 0 2 979 779 214 23 0 chr15 51678842 51678973 -51816001 + B1_Mur4 SINE Alu 1 134 -16 2 979 1401 0 23 11 chr15 51678973 51679149 -51815825 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 2 979 330 296 106 22 chr15 51679851 51680031 -51814943 - MER21B LTR ERV1 -267 596 402 2 979 270 159 43 0 chr15 51680031 51680100 -51814874 + G-rich Low_complexity Low_complexity 5 76 0 2 979 325 254 226 16 chr15 51680101 51680225 -51814749 + HAL1-3A_ME LINE L1 2286 2435 -423 2 979 298 256 100 45 chr15 51680602 51680802 -51814172 - Charlie1a DNA MER1_type -93 1362 1152 2 979 529 251 95 61 chr15 51681197 51681557 -51813417 - Charlie1b DNA MER1_type -224 299 60 2 979 1128 221 14 18 chr15 51681820 51682037 -51812937 - B3 SINE B2 0 216 1 2 979 236 324 31 18 chr15 51682077 51682188 -51812786 + B1F SINE Alu 9 117 0 2 979 781 112 15 15 chr15 51682247 51682383 -51812591 + (GGAA)n Simple_repeat Simple_repeat 3 138 0 2 979 1599 214 153 0 chr15 51682857 51683217 -51811757 - MTD LTR MaLR 0 419 5 2 979 1385 181 88 31 chr15 51683217 51683560 -51811414 - ORR1B2 LTR MaLR -12 347 1 2 979 763 139 412 8 chr15 51683672 51683912 -51811062 - Lx9 LINE L1 0 7644 7308 2 979 274 220 17 17 chr15 51684144 51684204 -51810770 + tRNA-Ala-GCY_ tRNA tRNA 2 61 -14 2 979 251 289 38 38 chr15 51684204 51684217 -51810757 + ID4_ SINE ID 21 79 -4 2 979 2221 104 9 3 chr15 51684337 51684654 -51810320 + ORR1A2 LTR MaLR 1 319 -8 2 979 598 232 48 96 chr15 51684812 51684848 -51810126 + B4 SINE B4 58 216 -76 2 979 1082 46 0 0 chr15 51684848 51684979 -51809995 + B1_Mus2 SINE Alu 7 137 -10 2 979 650 227 51 13 chr15 51685512 51685668 -51809306 - B3A SINE B2 -36 162 1 2 979 802 162 47 40 chr15 51686261 51686409 -51808565 + B1_Mur4 SINE Alu 2 150 0 2 979 375 105 0 0 chr15 51686412 51686469 -51808505 + (GAAAA)n Simple_repeat Simple_repeat 2 58 0 2 979 473 242 117 0 chr15 51686603 51686731 -51808243 + ID_B1 SINE B4 81 223 -1 2 979 21 0 0 0 chr15 51687828 51687849 -51807125 + AT_rich Low_complexity Low_complexity 1 21 0 2 979 455 200 209 0 chr15 51688183 51688293 -51806681 + B1_Mm SINE Alu 1 133 -14 2 979 210 37 0 0 chr15 51689652 51689679 -51805295 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 979 1514 134 5 5 chr15 51689837 51690061 -51804913 - URR1B DNA MER1_type 0 225 2 2 979 3489 182 168 58 chr15 51690176 51691077 -51803897 - RMER1B Other Other -63 1003 4 2 979 274 196 0 0 chr15 51692019 51692070 -51802904 - B1F1 SINE Alu -94 55 5 2 979 500 271 115 8 chr15 51692322 51692452 -51802522 - ID_B1 SINE B4 -11 213 70 2 979 683 313 112 4 chr15 51692710 51692960 -51802014 + Lx8 LINE L1 6532 6808 -665 3 979 363 182 223 10 chr15 51692960 51693081 -51801893 + B1_Mus2 SINE Alu 3 149 0 3 979 686 278 126 0 chr15 51693103 51693373 -51801601 + Lx8 LINE L1 6809 7112 -361 3 979 271 221 14 56 chr15 51693958 51694030 -51800944 + 4.5SRNA scRNA scRNA 23 91 -3 3 979 547 144 38 19 chr15 51693973 51694079 -51800895 + B1_Mus2 SINE Alu 40 147 0 3 979 326 23 0 23 chr15 51694079 51694123 -51800851 + (CAAAAA)n Simple_repeat Simple_repeat 6 48 0 3 979 198 0 0 0 chr15 51694267 51694289 -51800685 + (A)n Simple_repeat Simple_repeat 1 22 0 3 979 411 206 50 40 chr15 51694993 51695094 -51799880 - PB1D7 SINE Alu -14 106 5 3 979 1303 48 0 0 chr15 51695831 51695978 -51798996 + B1_Mus2 SINE Alu 1 147 0 3 979 182 118 29 0 chr15 51696077 51696111 -51798863 + (GGAGAA)n Simple_repeat Simple_repeat 3 37 0 3 979 386 262 65 0 chr15 51696144 51696251 -51798723 - PB1D9 SINE Alu -2 118 5 3 979 1841 153 51 3 chr15 51697938 51698273 -51796701 - RLTR28 LTR ERVL -173 351 1 3 979 1208 42 35 0 chr15 51698389 51698531 -51796443 + B1_Mus2 SINE Alu 1 147 0 3 979 732 206 29 0 chr15 51698580 51698716 -51796258 + B1_Mur3 SINE Alu 9 148 -1 3 979 1205 76 7 0 chr15 51698726 51698871 -51796103 + B1_Mus2 SINE Alu 2 147 0 3 979 194 57 0 54 chr15 51698874 51698911 -51796063 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 979 1346 226 29 35 chr15 51698935 51699247 -51795727 - Lx6 LINE L1 -309 7151 6842 3 979 207 0 0 0 chr15 51699248 51699271 -51795703 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 3 979 236 295 13 13 chr15 51699279 51699293 -51795681 - Lx7 LINE L1 -457 6601 6588 3 979 539 103 10 0 chr15 51699293 51699390 -51795584 + (TG)n Simple_repeat Simple_repeat 2 99 0 3 979 381 197 14 14 chr15 51699390 51699465 -51795509 - Lx7 LINE L1 -810 6886 6814 3 979 376 273 66 37 chr15 51699595 51699843 -51795131 + L1MDa LINE L1 2417 2670 -3867 3 979 880 270 29 45 chr15 51699855 51700087 -51794887 + B4 SINE B4 1 228 -64 3 979 484 246 85 0 chr15 51700087 51700205 -51794769 + RSINE1 SINE B4 2 129 -36 3 979 229 300 126 42 chr15 51700205 51700254 -51794720 + B2_Mm2 SINE B2 1 181 -14 3 979 198 103 0 0 chr15 51700255 51700284 -51794690 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 3 979 1330 41 0 0 chr15 51700284 51700431 -51794543 - B1_Mm SINE Alu 0 147 1 3 979 336 247 27 0 chr15 51700445 51700518 -51794456 + B4 SINE B4 218 292 0 3 979 214 341 32 0 chr15 51700519 51700645 -51794329 + (CA)n Simple_repeat Simple_repeat 2 131 0 3 979 312 246 79 36 chr15 51700651 51700790 -51794184 + L1MDa LINE L1 3336 3480 -3057 3 979 213 81 54 0 chr15 51700790 51700827 -51794147 + (CAGA)n Simple_repeat Simple_repeat 1 39 0 3 979 258 0 71 0 chr15 51701189 51701231 -51793743 + (CAA)n Simple_repeat Simple_repeat 2 46 0 3 979 3720 97 103 2 chr15 51701579 51702094 -51792880 - RMER2 LTR ERV1 0 567 1 3 979 798 264 87 77 chr15 51702474 51702644 -51792330 - ORR1E LTR MaLR -42 317 151 3 979 203 0 37 0 chr15 51702644 51702671 -51792303 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 979 798 264 87 77 chr15 51702671 51702812 -51792162 - ORR1E LTR MaLR -209 150 4 3 979 22 0 0 0 chr15 51703010 51703032 -51791942 + AT_rich Low_complexity Low_complexity 1 22 0 3 979 24 0 0 0 chr15 51704185 51704209 -51790765 + AT_rich Low_complexity Low_complexity 1 24 0 3 979 659 173 181 16 chr15 51704211 51704393 -51790581 + B3 SINE B2 1 212 -4 3 979 1703 27 21 0 chr15 51704549 51704737 -51790237 - B2_Mm1a SINE B2 0 193 2 3 979 626 262 21 0 chr15 51704782 51704927 -51790047 + B1_Mur1 SINE Alu 2 149 0 3 979 588 178 18 27 chr15 51704953 51705063 -51789911 + RMER15 LTR ERVL 465 573 -2 3 979 24 0 0 0 chr15 51705425 51705449 -51789525 + AT_rich Low_complexity Low_complexity 1 24 0 3 979 27 0 0 0 chr15 51705983 51706010 -51788964 + AT_rich Low_complexity Low_complexity 1 27 0 3 979 580 270 99 11 chr15 51706332 51706523 -51788451 + Tigger7 DNA MER2_type 2254 2461 -30 3 979 324 0 0 0 chr15 51707446 51707482 -51787492 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 979 1143 192 27 0 chr15 51707918 51708137 -51786837 + URR1B DNA MER1_type 1 225 0 3 979 722 197 58 14 chr15 51708283 51708422 -51786552 - B1_Mus2 SINE Alu -1 146 2 3 979 197 259 49 49 chr15 51709411 51709472 -51785502 + MIRb SINE MIR 46 106 -162 3 979 213 300 53 53 chr15 51709700 51709795 -51785179 - L2a LINE L2 -19 3407 3313 3 979 856 230 6 0 chr15 51710394 51710559 -51784415 + B3A SINE B2 3 168 -30 3 979 21 0 0 0 chr15 51710559 51710580 -51784394 + AT_rich Low_complexity Low_complexity 1 21 0 3 979 842 159 0 28 chr15 51710596 51710738 -51784236 - B1_Mus2 SINE Alu -8 139 2 3 979 403 247 50 141 chr15 51710738 51710813 -51784161 - MT2B LTR ERVL -446 155 99 3 979 270 378 104 0 chr15 51710757 51710892 -51784082 - Charlie17a DNA MER1_type -46 173 25 3 979 298 244 30 19 chr15 51710964 51711055 -51783919 + PB1D7 SINE Alu 11 107 -10 3 979 216 171 14 54 chr15 51711097 51711171 -51783803 + T-rich Low_complexity Low_complexity 2 72 0 3 979 739 143 10 250 chr15 51711173 51711369 -51783605 - B1_Mur4 SINE Alu -1 149 1 3 979 1312 213 218 11 chr15 51711525 51711905 -51783069 - Lx6 LINE L1 -19 7441 6983 3 979 823 70 7 86 chr15 51712297 51712437 -51782537 - L1Md_F2 LINE L1 -2 6580 6452 3 979 595 209 112 0 chr15 51713189 51713323 -51781651 + B3 SINE B2 1 149 -67 3 979 306 0 0 0 chr15 51714355 51714389 -51780585 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 979 1031 275 32 21 chr15 51714442 51714724 -51780250 - B4A SINE B4 -7 285 1 3 979 454 239 81 49 chr15 51714749 51714772 -51780202 + RSINE1 SINE B4 4 26 -139 3 979 3547 38 0 8 chr15 51714772 51715171 -51779803 - MTA_Mm LTR MaLR 0 396 1 3 979 454 239 81 49 chr15 51715171 51715270 -51779704 + RSINE1 SINE B4 27 130 -35 3 979 709 336 86 42 chr15 51716321 51717010 -51777964 + Lx8 LINE L1 6657 7375 -98 3 979 1493 76 5 0 chr15 51717639 51717824 -51777150 + B2_Mm1t SINE B2 1 186 -7 3 979 1199 306 91 17 chr15 51718466 51719216 -51775758 + L1MB8 LINE L1 5236 6044 -134 3 979 2340 119 68 16 chr15 51720893 51721278 -51773696 + RLTR28 LTR ERVL 1 405 -119 3 979 504 0 0 0 chr15 51721365 51721421 -51773553 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 979 2954 168 46 96 chr15 51721428 51722033 -51772941 - RMER15 LTR ERVL 0 575 1 3 979 749 206 0 7 chr15 51722359 51722506 -51772468 + B1_Mus2 SINE Alu 1 146 -1 3 979 1707 151 128 20 chr15 51722620 51722971 -51772003 + ORR1B1 LTR MaLR 1 389 -5 3 979 1086 66 0 0 chr15 51722971 51723107 -51771867 + B1_Mus2 SINE Alu 1 136 -11 3 979 315 0 0 0 chr15 51723107 51723142 -51771832 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 979 305 314 30 53 chr15 51724640 51724771 -51770203 - B1_Mus1 SINE Alu -3 145 18 3 979 567 290 15 0 chr15 51724656 51724787 -51770187 - ID_B1 SINE B4 -12 212 80 3 979 314 333 46 26 chr15 51725551 51725702 -51769272 - MLT1J LTR MaLR -61 451 298 3 979 459 0 0 0 chr15 51726984 51727035 -51767939 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 979 270 0 0 0 chr15 51727035 51727064 -51767910 + (GA)n Simple_repeat Simple_repeat 1 30 0 3 979 1384 227 79 79 chr15 51727068 51727488 -51767486 - RLTR18B LTR ERVK -19 493 74 3 979 333 0 0 0 chr15 51727703 51727740 -51767234 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 979 353 169 28 0 chr15 51727892 51727963 -51767011 - RLTR18B LTR ERVK -435 77 5 3 979 406 299 53 33 chr15 51727963 51728115 -51766859 - RSINE1 SINE B4 -8 157 3 3 979 1049 325 88 23 chr15 51728150 51728842 -51766132 + L1ME1 LINE L1 5423 6159 -20 3 979 1403 50 22 6 chr15 51729661 51729842 -51765132 + B2_Mm2 SINE B2 3 186 -9 3 979 3643 66 0 2 chr15 51729933 51730420 -51764554 + L1_Mus1 LINE L1 6111 6567 0 3 979 624 240 0 0 chr15 51730491 51730616 -51764358 + B4A SINE B4 166 290 -2 3 979 182 37 0 36 chr15 51731749 51731777 -51763197 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 3 979 886 175 129 10 chr15 51731862 51732064 -51762910 + URR1A DNA MER1_type 1 226 0 3 979 800 244 17 70 chr15 51732128 51732338 -51762636 + RLTR11B LTR ERVK 3 201 -252 3 979 1846 193 56 101 chr15 51732338 51732429 -51762545 - RLTR11A LTR ERVK 0 528 449 3 979 1273 117 16 11 chr15 51732429 51732619 -51762355 - B2_Mm2 SINE B2 -4 191 1 3 979 1846 193 56 101 chr15 51732619 51733080 -51761894 - RLTR11A LTR ERVK -80 448 1 3 979 800 244 17 70 chr15 51733080 51733169 -51761805 + RLTR11B LTR ERVK 202 285 -168 3 979 546 355 35 17 chr15 51733212 51733444 -51761530 - MER47B DNA MER2_type -174 244 9 3 979 392 318 67 7 chr15 51733820 51733969 -51761005 + MER63B DNA AcHobo 277 434 -2 3 979 817 258 21 25 chr15 51733981 51734220 -51760754 + MT2A LTR ERVL 3 240 -293 3 979 1076 155 21 72 chr15 51734341 51734578 -51760396 - URR1B DNA MER1_type 0 225 1 3 979 838 220 78 38 chr15 51734591 51734884 -51760090 + RLTR20B3 LTR ERVK 22 326 -251 3 979 776 264 80 89 chr15 51734881 51735205 -51759769 - RLTR23 LTR ERV1 -17 413 93 3 979 446 202 10 21 chr15 51735238 51735334 -51759640 - RLTR23 LTR ERV1 -330 100 6 3 979 279 355 0 9 chr15 51735660 51735771 -51759203 - L2 LINE L2 -588 2831 2722 3 979 760 131 153 0 chr15 51736555 51736692 -51758282 + B2_Mm2 SINE B2 1 158 -37 3 979 360 0 0 0 chr15 51736692 51736732 -51758242 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 3 979 270 0 0 0 chr15 51737461 51737491 -51757483 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 979 430 207 190 0 chr15 51737884 51738005 -51756969 - B1_Mur1 SINE Alu -3 146 3 3 979 1666 11 0 11 chr15 51738048 51738235 -51756739 + B2_Mm1a SINE B2 1 185 -8 3 979 201 239 269 0 chr15 51738238 51738305 -51756669 - MIRb SINE MIR -55 213 129 3 979 24 0 0 0 chr15 51738327 51738351 -51756623 + AT_rich Low_complexity Low_complexity 1 24 0 4 979 285 351 25 19 chr15 51738573 51738730 -51756244 - LTR84a LTR ERVL -480 277 120 4 979 801 187 0 36 chr15 51739091 51739230 -51755744 + B1_Mur3 SINE Alu 1 134 -15 4 979 317 258 114 24 chr15 51739970 51740093 -51754881 - MLT1K LTR MaLR -7 588 455 4 979 780 156 14 7 chr15 51740621 51740763 -51754211 + URR1B DNA MER1_type 83 225 0 4 979 861 292 68 34 chr15 51740783 51741134 -51753840 + MLT1A0 LTR MaLR 1 363 -2 4 979 367 278 0 0 chr15 51741331 51741421 -51753553 + Lx8 LINE L1 7155 7244 -229 4 979 640 258 95 23 chr15 51741558 51741820 -51753154 - RMER20B LTR ERVK -219 408 128 4 979 1748 138 86 180 chr15 51741955 51742388 -51752586 - ORR1B1 LTR MaLR -2 392 1 4 979 509 209 163 59 chr15 51742394 51742597 -51752377 + Lx8 LINE L1 7248 7471 -2 4 979 27 29 0 0 chr15 51742779 51742813 -51752161 + AT_rich Low_complexity Low_complexity 1 34 0 4 979 448 310 9 17 chr15 51742873 51742988 -51751986 + RSINE1 SINE B4 25 138 -27 4 979 852 155 13 26 chr15 51743061 51743213 -51751761 + B1_Mur4 SINE Alu 1 150 0 4 979 893 262 134 56 chr15 51744155 51744514 -51750460 - MLT1B LTR MaLR 0 390 4 4 979 286 265 49 0 chr15 51744695 51744797 -51750177 + L1M2 LINE L1 5070 5176 -967 4 979 407 225 103 83 chr15 51744819 51744872 -51750102 + L1M2 LINE L1 5279 5331 -960 4 979 952 248 0 19 chr15 51744872 51745086 -51749888 + B3 SINE B2 2 211 -5 4 979 407 225 103 83 chr15 51745086 51745236 -51749738 + L1M2 LINE L1 5332 5486 -805 4 979 249 309 0 0 chr15 51745257 51745325 -51749649 + RSINE1 SINE B4 26 93 -72 4 979 1817 153 162 21 chr15 51745333 51745352 -51749622 + RMER15 LTR ERVL 1 17 -558 4 979 2023 212 35 68 chr15 51745352 51745924 -51749050 + RLTR31_Mur LTR ERVK 1 553 0 4 979 1817 153 162 21 chr15 51745924 51746329 -51748645 + RMER15 LTR ERVL 18 485 -90 4 979 2260 167 8 47 chr15 51746329 51746433 -51748541 + RLTR28 LTR ERVL 1 100 -424 4 979 1197 76 70 6 chr15 51746433 51746605 -51748369 - B2_Mm2 SINE B2 -12 183 1 4 979 2260 167 8 47 chr15 51746605 51746971 -51748003 + RLTR28 LTR ERVL 101 453 -71 4 979 699 141 103 0 chr15 51746987 51747143 -51747831 + RLTR28 LTR ERVL 343 514 -10 4 979 487 221 0 21 chr15 51747163 51747260 -51747714 + RMER15 LTR ERVL 481 575 0 4 979 394 88 29 0 chr15 51747268 51747336 -51747638 + (TAGA)n Simple_repeat Simple_repeat 2 71 0 4 979 1240 232 76 78 chr15 51748225 51748595 -51746379 - ORR1D2 LTR MaLR -1 369 1 4 979 414 0 0 0 chr15 51749459 51749505 -51745469 + (TC)n Simple_repeat Simple_repeat 2 47 0 4 979 510 17 0 0 chr15 51749505 51749563 -51745411 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 979 1168 43 0 7 chr15 51749563 51749703 -51745271 - B1_Mus2 SINE Alu -8 139 1 4 979 414 0 0 0 chr15 51749834 51749880 -51745094 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 979 274 200 56 14 chr15 51750330 51750401 -51744573 - ID4 SINE ID -8 75 2 4 979 198 0 0 0 chr15 51750454 51750476 -51744498 + (T)n Simple_repeat Simple_repeat 1 22 0 4 979 931 208 36 14 chr15 51750812 51751031 -51743943 - URR1A DNA MER1_type -2 224 1 4 979 230 325 26 0 chr15 51751436 51751513 -51743461 + ID4_ SINE ID 2 80 -3 4 979 1053 123 94 132 chr15 51751613 51751754 -51743220 - URR1A DNA MER1_type 0 226 109 4 979 862 153 14 14 chr15 51751754 51751900 -51743074 + B1_Mus1 SINE Alu 1 146 -2 4 979 1053 123 94 132 chr15 51751900 51751993 -51742981 - URR1A DNA MER1_type -118 108 1 4 979 22 56 0 0 chr15 51752394 51752430 -51742544 + AT_rich Low_complexity Low_complexity 1 36 0 4 979 198 0 0 0 chr15 51752753 51752775 -51742199 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 4 979 381 364 63 15 chr15 51752786 51753118 -51741856 - L1M5 LINE L1 -1248 4898 4551 4 979 1014 266 97 15 chr15 51753754 51754094 -51740880 + ORR1D2 LTR MaLR 1 368 -2 4 979 409 202 63 0 chr15 51754523 51754602 -51740372 + B3 SINE B2 47 130 -86 4 979 22 0 0 0 chr15 51754617 51754639 -51740335 + AT_rich Low_complexity Low_complexity 1 22 0 4 979 3257 48 5 5 chr15 51754712 51755108 -51739866 + MTA_Mm LTR MaLR 1 396 0 4 979 36 53 0 0 chr15 51755525 51755582 -51739392 + AT_rich Low_complexity Low_complexity 1 57 0 4 979 233 169 0 235 chr15 51755867 51755952 -51739022 + ID4 SINE ID 6 70 -13 4 979 237 276 21 87 chr15 51756400 51756528 -51738446 - L2c LINE L2 -8 3379 3237 4 979 603 80 1 11 chr15 51757114 51757212 -51737762 + L1_Mur3 LINE L1 3305 3403 -2477 4 979 1167 68 7 0 chr15 51757212 51757358 -51737616 + B1_Mm SINE Alu 1 147 0 4 979 288 209 28 19 chr15 51757358 51757377 -51737597 + L1_Rod LINE L1 3418 3439 -2408 4 979 372 164 0 0 chr15 51757377 51757444 -51737530 + A-rich Low_complexity Low_complexity 1 67 0 4 979 319 105 0 252 chr15 51757455 51757476 -51737498 + L1_Mur3 LINE L1 3392 3407 -2473 4 979 1446 65 21 0 chr15 51757476 51757662 -51737312 + B2_Mm2 SINE B2 1 190 -5 4 979 319 105 0 252 chr15 51757662 51757755 -51737219 + L1_Mur3 LINE L1 3408 3477 -2403 4 979 2880 142 36 6 chr15 51757754 51758220 -51736754 + RMER1B Other Other 587 1066 0 4 979 2105 152 25 0 chr15 51758248 51758603 -51736371 + L1_Mur3 LINE L1 3488 3851 -2029 4 979 1349 131 52 4 chr15 51758579 51758810 -51736164 + L1_Mur3 LINE L1 4986 5227 -653 4 979 751 193 15 0 chr15 51758814 51758949 -51736025 + B1_Mur4 SINE Alu 4 140 -10 4 979 684 154 91 0 chr15 51758960 51759103 -51735871 + L1_Mur3 LINE L1 5227 5382 -498 4 979 563 329 108 15 chr15 51759103 51759445 -51735529 - MLT1D LTR MaLR -119 386 13 4 979 1220 42 0 7 chr15 51759983 51760128 -51734846 + B1_Mus2 SINE Alu 3 146 -1 4 979 213 39 0 0 chr15 51760133 51760159 -51734815 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 4 979 440 328 58 70 chr15 51760207 51760257 -51734717 - Lx8 LINE L1 -2 7471 7406 4 979 2401 184 207 11 chr15 51760257 51760871 -51734103 + RMER19A LTR ERVK 1 734 -3 4 979 440 328 58 70 chr15 51760871 51760902 -51734072 - Lx8 LINE L1 -68 7405 7376 4 979 1336 51 94 17 chr15 51760902 51760920 -51734054 - B2_Mm2 SINE B2 -1 194 160 4 979 315 0 0 0 chr15 51760920 51760955 -51734019 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 4 979 1336 51 94 17 chr15 51760955 51761116 -51733858 - B2_Mm2 SINE B2 -36 159 1 4 979 440 328 58 70 chr15 51761116 51761180 -51733794 - Lx8 LINE L1 -98 7375 7326 4 979 3964 98 24 5 chr15 51761180 51761722 -51733252 + Lx3A LINE L1 6415 6968 -13 4 979 540 0 0 0 chr15 51761722 51761782 -51733192 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 4 979 440 328 58 70 chr15 51761790 51761954 -51733020 - Lx8 LINE L1 -148 7325 7164 4 979 225 128 146 21 chr15 51763016 51763064 -51731910 - PB1D10 SINE Alu 0 117 64 4 979 404 207 27 54 chr15 51763074 51763258 -51731716 - RMER17C LTR ERVK -135 275 97 4 979 394 184 13 0 chr15 51763259 51763335 -51731639 - B1F SINE Alu -72 77 1 4 979 549 233 81 14 chr15 51763726 51763874 -51731100 + B3A SINE B2 3 160 -38 4 979 332 43 22 0 chr15 51763877 51763923 -51731051 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 979 186 71 0 0 chr15 51763923 51763951 -51731023 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 979 285 265 162 0 chr15 51764235 51764371 -51730603 + L1MD1 LINE L1 6070 6227 -15 4 979 266 0 0 29 chr15 51764372 51764407 -51730567 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 979 1171 36 0 0 chr15 51764407 51764544 -51730430 - B1_Mus1 SINE Alu -10 138 2 4 979 189 263 0 0 chr15 51764708 51764746 -51730228 + MIRm SINE MIR 116 153 -123 4 979 228 291 22 44 chr15 51764712 51764802 -51730172 + MIRb SINE MIR 120 207 -61 4 979 441 0 0 0 chr15 51764804 51764853 -51730121 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 979 1187 97 28 0 chr15 51765793 51765969 -51729005 - L1Md_T LINE L1 0 6582 6402 4 979 3445 35 2 0 chr15 51767337 51767739 -51727235 - L1Md_F2 LINE L1 0 6582 6180 4 979 185 65 32 0 chr15 51768188 51768219 -51726755 + (TTTG)n Simple_repeat Simple_repeat 3 34 0 4 979 639 267 15 0 chr15 51768219 51768354 -51726620 - B1_Mur3 SINE Alu -12 137 1 4 979 579 111 162 0 chr15 51768392 51768509 -51726465 + B1_Mur1 SINE Alu 9 144 -5 4 979 194 203 136 0 chr15 51769079 51769138 -51725836 + L2b LINE L2 3309 3375 0 4 979 1481 195 39 26 chr15 51769203 51769514 -51725460 - RLTR20B2 LTR ERVK -20 540 226 4 979 744 169 0 0 chr15 51769502 51769626 -51725348 - RLTR20B2 LTR ERVK -436 124 1 4 979 1860 175 165 84 chr15 51769767 51770567 -51724407 - RMER6C LTR ERVK 0 720 1 4 979 537 162 17 35 chr15 51770653 51770768 -51724206 + PB1D10 SINE Alu 5 117 0 4 979 180 0 0 0 chr15 51771055 51771075 -51723899 + (A)n Simple_repeat Simple_repeat 1 20 0 4 979 250 77 37 37 chr15 51771408 51771462 -51723512 + (CAGAGA)n Simple_repeat Simple_repeat 6 59 0 4 979 790 238 64 0 chr15 51771703 51771905 -51723069 + B3 SINE B2 2 216 0 4 979 387 256 36 29 chr15 51772896 51773033 -51721941 - L2c LINE L2 0 3387 3250 4 980 431 190 73 170 chr15 51773499 51773664 -51721310 - B1F2 SINE Alu 0 149 1 4 980 3272 208 41 56 chr15 51773685 51774180 -51720794 + Lx6 LINE L1 5908 6405 -1055 4 980 3600 59 50 0 chr15 51774180 51774638 -51720336 - L1_Mus1 LINE L1 0 6567 6087 4 980 3272 208 41 56 chr15 51774638 51774854 -51720120 + Lx6 LINE L1 6406 6614 -846 4 980 2115 134 6 15 chr15 51774854 51775186 -51719788 - ORR1A4 LTR MaLR 0 329 1 4 980 3272 208 41 56 chr15 51775186 51775226 -51719748 + Lx6 LINE L1 6615 6649 -811 4 980 1370 178 52 4 chr15 51775226 51775474 -51719500 + Lx6 LINE L1 6809 7068 -392 4 980 229 307 22 11 chr15 51775572 51775661 -51719313 - MTE2b LTR MaLR -15 364 275 4 980 822 204 145 31 chr15 51775752 51775979 -51718995 - MTE2b LTR MaLR -112 267 15 4 980 237 287 115 39 chr15 51775991 51776147 -51718827 - ORR1E LTR MaLR -113 246 79 4 980 230 184 0 0 chr15 51776673 51776722 -51718252 + MIR SINE MIR 146 194 -68 4 980 333 362 60 32 chr15 51777143 51777360 -51717614 - Lx8 LINE L1 -187 7286 7064 4 980 246 207 17 17 chr15 51777394 51777453 -51717521 + Lx6 LINE L1 6993 7051 -409 4 980 1848 104 45 7 chr15 51777456 51777766 -51717208 + ORR1A2 LTR MaLR 6 327 0 4 980 1672 263 5 15 chr15 51777767 51778161 -51716813 + Lx6 LINE L1 7045 7434 -26 4 980 2511 77 3 9 chr15 51778177 51778505 -51716469 + ORR1A2 LTR MaLR 1 326 -1 4 980 350 292 193 31 chr15 51778510 51778800 -51716174 + Lx8 LINE L1 7137 7473 0 4 980 21 0 0 0 chr15 51778999 51779020 -51715954 + AT_rich Low_complexity Low_complexity 1 21 0 4 980 317 321 154 44 chr15 51779148 51779441 -51715533 - Lx8 LINE L1 -2 7471 7147 4 980 1072 325 42 42 chr15 51779500 51779589 -51715385 - L1MEc LINE L1 -3190 3129 3040 4 980 1129 62 21 0 chr15 51779589 51779733 -51715241 + B1_Mm SINE Alu 1 147 0 5 980 1072 325 42 42 chr15 51779733 51780363 -51714611 - L1MEc LINE L1 -3280 3039 2410 4 980 437 305 129 60 chr15 51780501 51780997 -51713977 - L1MEc LINE L1 -4999 1401 872 4 980 181 130 65 0 chr15 51781098 51781144 -51713830 + CT-rich Low_complexity Low_complexity 4 52 0 5 980 2045 161 17 0 chr15 51781194 51781547 -51713427 + ORR1B2 LTR MaLR 1 359 -8 5 980 376 344 101 29 chr15 51781550 51782026 -51712948 - L1MEc LINE L1 -5679 721 212 4 980 235 333 47 47 chr15 51782701 51782871 -51712103 + Charlie4a DNA MER1_type 35 204 -304 5 980 227 264 62 8 chr15 51782937 51783067 -51711907 + Charlie4a DNA MER1_type 260 396 -112 5 980 234 81 0 0 chr15 51783194 51783231 -51711743 + (T)n Simple_repeat Simple_repeat 1 37 0 5 980 834 286 40 66 chr15 51784089 51784467 -51710507 + MTD LTR MaLR 2 369 -50 5 980 417 20 0 0 chr15 51784469 51784519 -51710455 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 980 536 331 6 46 chr15 51784774 51784948 -51710026 + B4 SINE B4 90 256 -36 5 980 306 0 0 0 chr15 51784958 51784992 -51709982 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 980 1466 279 50 10 chr15 51784999 51785416 -51709558 - Lx8 LINE L1 -664 6809 6376 5 980 481 267 8 32 chr15 51786169 51786293 -51708681 - RSINE1 SINE B4 -43 122 2 5 980 1193 55 7 0 chr15 51787626 51787772 -51707202 - B1_Mus1 SINE Alu -1 147 1 5 980 1364 180 36 4 chr15 51787786 51788037 -51706937 - MTC LTR MaLR -8 413 155 5 980 1473 76 5 9 chr15 51788041 51788253 -51706721 - ORR1A1 LTR MaLR -8 338 128 5 980 1136 110 0 0 chr15 51788354 51788518 -51706456 - B2_Mm2 SINE B2 -31 164 1 5 980 293 261 217 25 chr15 51788884 51789041 -51705933 - L1MA8 LINE L1 -371 5920 5734 5 980 734 203 154 26 chr15 51789858 51790091 -51704883 - RLTR11A2 LTR ERVK -262 265 3 5 980 2681 34 6 18 chr15 51790711 51791044 -51703930 + L1Md_F3 LINE L1 6256 6584 0 5 980 226 156 0 43 chr15 51791351 51791398 -51703576 + B1F SINE Alu 103 147 -2 5 980 189 0 0 0 chr15 51791513 51791534 -51703440 + (A)n Simple_repeat Simple_repeat 1 21 0 5 980 665 268 157 23 chr15 51791879 51792185 -51702789 - Lx8 LINE L1 -21 7452 7106 5 980 369 276 138 18 chr15 51792207 51792506 -51702468 - L1MA4 LINE L1 -297 5859 5516 5 980 621 172 0 33 chr15 51792599 51792719 -51702255 - B1_Mus2 SINE Alu -23 124 9 5 980 293 228 26 137 chr15 51792621 51792738 -51702236 - MT2B LTR ERVL -344 257 154 5 980 264 125 812 10 chr15 51797918 51798008 -51696966 - Lx5 LINE L1 -3 7047 6885 5 980 342 115 0 0 chr15 51798127 51798179 -51696795 + (TTCTCC)n Simple_repeat Simple_repeat 1 52 0 5 980 928 90 0 0 chr15 51798489 51798622 -51696352 - B1_Mus1 SINE Alu 0 148 16 5 980 183 139 0 0 chr15 51799908 51799944 -51695030 + (CTG)n Simple_repeat Simple_repeat 2 37 0 5 980 596 112 112 0 chr15 51800462 51800569 -51694405 - PB1D9 SINE Alu 0 120 2 5 980 448 179 0 23 chr15 51802133 51802219 -51692755 - Lx9 LINE L1 -176 7468 7385 5 980 485 229 16 41 chr15 51802235 51802358 -51692616 - PB1D9 SINE Alu 0 120 1 5 980 491 294 70 19 chr15 51802918 51803074 -51691900 - RSINE1 SINE B4 0 165 2 5 980 1249 105 22 0 chr15 51804072 51804253 -51690721 + B2_Mm1t SINE B2 3 187 -6 5 980 574 214 0 0 chr15 51804287 51804390 -51690584 + PB1D9 SINE Alu 5 107 -13 5 980 31 26 0 0 chr15 51805560 51805598 -51689376 + AT_rich Low_complexity Low_complexity 1 38 0 5 980 496 222 118 8 chr15 51805973 51806100 -51688874 + B1_Mur2 SINE Alu 9 149 0 5 980 1187 43 0 0 chr15 51806158 51806297 -51688677 + B1_Mus1 SINE Alu 2 140 -8 5 980 451 233 8 33 chr15 51806788 51806908 -51688066 - PB1D9 SINE Alu -2 118 2 5 980 408 247 75 87 chr15 51808046 51808169 -51686805 - B4A SINE B4 -17 275 160 5 980 1437 34 79 0 chr15 51808169 51808328 -51686646 + B2_Mm1a SINE B2 2 160 -33 5 980 243 0 0 0 chr15 51808328 51808355 -51686619 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 5 980 1437 34 79 0 chr15 51808355 51808373 -51686601 + B2_Mm1a SINE B2 161 191 -2 5 980 408 296 55 84 chr15 51808373 51808504 -51686470 - B4A SINE B4 -133 159 31 5 980 1080 36 0 0 chr15 51808632 51808771 -51686203 + B1_Mus1 SINE Alu 10 148 0 5 980 1769 38 0 0 chr15 51811124 51811337 -51683637 - L1Md_A LINE L1 0 6582 6370 5 980 1170 69 0 0 chr15 51811459 51811603 -51683371 + B1_Mus2 SINE Alu 2 145 -2 5 980 219 170 0 0 chr15 51811610 51811657 -51683317 + A-rich Low_complexity Low_complexity 1 47 0 5 980 252 0 0 0 chr15 51811698 51811726 -51683248 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 980 434 294 141 46 chr15 51811930 51812319 -51682655 - L1MC1 LINE L1 -18 6315 5890 5 980 441 228 50 35 chr15 51812336 51812477 -51682497 - L1MC1 LINE L1 -555 5778 5636 5 980 388 270 35 28 chr15 51812563 51812704 -51682270 - L1MC1 LINE L1 -1114 5032 4891 5 980 302 287 66 47 chr15 51812858 51812964 -51682010 - RSINE1 SINE B4 -43 122 15 5 980 351 237 17 17 chr15 51813159 51813259 -51681715 - B4A SINE B4 -62 103 3 5 980 294 143 0 0 chr15 51813809 51813858 -51681116 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 980 1183 28 21 0 chr15 51814763 51814907 -51680067 - B1_Mm SINE Alu 0 147 1 5 980 439 307 84 32 chr15 51815236 51815546 -51679428 - L1MD2 LINE L1 -348 6011 5686 5 980 479 307 91 13 chr15 51815675 51815906 -51679068 + L1MD LINE L1 4627 4875 -1271 5 980 400 176 79 94 chr15 51816525 51816694 -51678280 + Lx9 LINE L1 5716 5910 -726 5 980 3458 201 213 29 chr15 51816761 51817877 -51677097 + Lx9 LINE L1 6156 7476 -168 5 980 261 0 0 0 chr15 51817877 51817906 -51677068 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 980 1465 73 5 0 chr15 51818165 51818356 -51676618 + B2_Mm1a SINE B2 2 193 0 5 980 263 324 103 0 chr15 51819818 51819954 -51675020 + MER2 DNA MER2_type 1 150 -195 5 980 1160 55 14 0 chr15 51820081 51820226 -51674748 - B1_Mus2 SINE Alu 0 147 1 5 980 311 242 230 20 chr15 51820256 51820408 -51674566 - Tigger1 DNA MER2_type 0 2418 2235 5 980 336 24 0 0 chr15 51820992 51821033 -51673941 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 980 180 0 0 0 chr15 51821033 51821052 -51673922 + (GA)n Simple_repeat Simple_repeat 1 20 0 5 980 268 187 81 4 chr15 51821210 51821286 -51673688 + PB1D10 SINE Alu 21 102 -47 5 980 1283 21 0 0 chr15 51821510 51821655 -51673319 + B1_Mm SINE Alu 3 147 0 5 980 240 35 0 0 chr15 51821655 51821684 -51673290 + (A)n Simple_repeat Simple_repeat 1 29 0 5 980 251 284 0 0 chr15 51823101 51823175 -51671799 + G-rich Low_complexity Low_complexity 1 74 0 5 980 21 0 0 0 chr15 51823595 51823616 -51671358 + AT_rich Low_complexity Low_complexity 1 21 0 5 980 806 124 43 14 chr15 51823860 51823999 -51670975 + B1_Mur4 SINE Alu 6 148 -2 5 980 198 0 0 0 chr15 51824901 51824923 -51670051 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 980 1135 72 0 0 chr15 51825476 51825614 -51669360 + B1_Mus2 SINE Alu 1 138 -9 5 980 189 0 0 0 chr15 51825614 51825635 -51669339 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 5 980 426 317 62 9 chr15 51826182 51826392 -51668582 + MIRb SINE MIR 33 253 -15 5 980 621 231 8 0 chr15 51826653 51826787 -51668187 + B1_Mus2 SINE Alu 13 147 0 5 980 252 149 0 0 chr15 51826788 51826835 -51668139 + (A)n Simple_repeat Simple_repeat 1 47 0 5 980 247 350 62 0 chr15 51826885 51826982 -51667992 + MLT1J LTR MaLR 205 307 -205 5 980 5258 145 77 10 chr15 51827024 51827857 -51667117 + Lx5 LINE L1 4889 5791 -86 5 980 1185 37 0 0 chr15 51827857 51827993 -51666981 + B1_Mm SINE Alu 2 137 -10 5 980 219 36 0 0 chr15 51827993 51828021 -51666953 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 5 980 5258 180 160 19 chr15 51828021 51829140 -51665834 + Lx5 LINE L1 5792 7050 0 5 980 813 213 52 74 chr15 51829165 51829242 -51665732 - RMER6B LTR ERVK -198 263 176 5 980 1198 68 0 0 chr15 51829242 51829388 -51665586 - B1_Mus2 SINE Alu 0 147 2 5 980 813 213 52 74 chr15 51829388 51829579 -51665395 - RMER6B LTR ERVK -286 175 1 5 980 1498 38 49 0 chr15 51829692 51829875 -51665099 + B2_Mm1a SINE B2 1 192 -1 5 980 911 181 171 0 chr15 51830008 51830201 -51664773 - URR1A DNA MER1_type 0 226 1 5 980 928 68 0 22 chr15 51830384 51830520 -51664454 + B2_Mm1a SINE B2 54 186 -7 5 980 285 338 0 23 chr15 51831148 51831281 -51663693 - L1MB5 LINE L1 -58 6126 5997 5 980 1162 68 0 0 chr15 51831289 51831436 -51663538 - B1_Mus2 SINE Alu 0 147 1 5 980 298 355 43 65 chr15 51831529 51831913 -51663061 - ORR1E LTR MaLR -2 368 1 5 980 240 232 22 109 chr15 51832258 51832350 -51662624 + MTEb LTR MaLR 278 361 -18 5 980 189 0 0 0 chr15 51832356 51832377 -51662597 + (A)n Simple_repeat Simple_repeat 1 21 0 5 980 1015 273 53 29 chr15 51832378 51832752 -51662222 - L1MB5 LINE L1 -259 5915 5533 5 980 1243 62 0 0 chr15 51832923 51833067 -51661907 - B1_Mus2 SINE Alu -1 146 3 5 980 408 255 69 0 chr15 51833072 51833174 -51661800 - PB1D7 SINE Alu 0 120 12 5 980 245 234 0 0 chr15 51833693 51833740 -51661234 - PB1D10 SINE Alu -62 55 9 5 980 1171 212 100 6 chr15 51833754 51834109 -51660865 + Lx7 LINE L1 7045 7696 0 5 980 2087 132 72 42 chr15 51834167 51834571 -51660403 - MTC LTR MaLR -5 416 1 5 980 904 37 0 0 chr15 51835905 51836013 -51658961 + B1_Mm SINE Alu 17 124 -23 5 980 277 43 43 0 chr15 51836013 51836060 -51658914 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 5 980 1338 80 56 17 chr15 51836617 51836796 -51658178 - B2_Mm2 SINE B2 -9 186 1 5 980 766 314 141 22 chr15 51837668 51837987 -51656987 + MER21B LTR ERV1 1 357 -506 5 980 280 383 58 13 chr15 51838636 51838792 -51656182 - L2a LINE L2 -257 3169 3007 5 980 30 37 0 18 chr15 51839133 51839154 -51655820 + AT_rich Low_complexity Low_complexity 1 21 0 5 980 1288 48 0 0 chr15 51839154 51839301 -51655673 + B1_Mus2 SINE Alu 1 147 0 5 980 30 37 0 18 chr15 51839301 51839334 -51655640 + AT_rich Low_complexity Low_complexity 1 33 0 5 980 2370 131 12 66 chr15 51839489 51839897 -51655077 - ORR1B1 LTR MaLR -8 386 1 6 980 277 361 100 24 chr15 51840167 51840337 -51654637 + MLT1G LTR MaLR 396 578 -13 6 980 234 0 0 0 chr15 51841242 51841268 -51653706 + (T)n Simple_repeat Simple_repeat 1 26 0 6 980 1284 169 0 100 chr15 51842336 51842586 -51652388 + URR1A DNA MER1_type 2 226 0 6 980 1565 168 30 54 chr15 51842727 51843145 -51651829 - RMER16 LTR ERVK 0 533 1 6 980 333 0 0 0 chr15 51844330 51844367 -51650607 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 6 980 1194 51 0 0 chr15 51844367 51844505 -51650469 - B1_Mus2 SINE Alu -9 138 1 6 980 1475 62 19 32 chr15 51844609 51844825 -51650149 + LTRIS2 LTR ERV1 1 213 -351 6 980 17426 53 0 2 chr15 51845881 51848726 -51646248 - L1Md_F2 LINE L1 0 6582 3742 6 980 216 216 0 0 chr15 51848955 51849006 -51645968 + A-rich Low_complexity Low_complexity 1 51 0 6 980 1305 77 24 0 chr15 51849192 51849360 -51645614 - L1_Mus1 LINE L1 0 6567 6396 6 980 1135 62 0 0 chr15 51849360 51849490 -51645484 - B1_Mus1 SINE Alu -18 130 1 6 980 405 0 0 0 chr15 51849542 51849587 -51645387 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 980 523 303 201 28 chr15 51849603 51850031 -51644943 + Tigger11a DNA MER2_type 207 708 -27 6 980 191 326 92 48 chr15 51851408 51851637 -51643337 + MIRb SINE MIR 4 242 -26 6 980 657 312 52 43 chr15 51852666 51852838 -51642136 + B4A SINE B4 38 217 -75 6 980 6962 48 14 0 chr15 51852838 51853630 -51641344 - RLTR13B4 LTR ERVK 0 803 1 6 980 657 312 52 43 chr15 51853630 51853688 -51641286 + B4A SINE B4 218 270 -22 6 980 990 228 82 12 chr15 51853691 51853935 -51641039 + Lx8 LINE L1 6949 7209 -264 6 980 27004 43 149 5 chr15 51854114 51859675 -51635299 - L1Md_T LINE L1 0 6585 54 6 980 1231 55 0 14 chr15 51859845 51859992 -51634982 + B1_Mus2 SINE Alu 3 147 0 6 980 3019 42 3 14 chr15 51860293 51860653 -51634321 + L1Md_F3 LINE L1 6229 6584 0 6 980 752 204 29 0 chr15 51860799 51860936 -51634038 - B1_Mus1 SINE Alu -2 146 6 6 980 21 0 0 0 chr15 51860957 51860978 -51633996 + AT_rich Low_complexity Low_complexity 1 21 0 6 980 993 47 141 0 chr15 51860978 51861106 -51633868 - B1_Mm SINE Alu 0 147 2 6 980 1152 96 0 0 chr15 51861787 51861933 -51633041 + B1_Mus2 SINE Alu 2 147 0 6 980 217 116 47 0 chr15 51861935 51861978 -51632996 + A-rich Low_complexity Low_complexity 1 45 0 6 980 479 281 83 97 chr15 51861981 51862269 -51632705 - ORR1E LTR MaLR -33 337 54 6 980 788 250 31 12 chr15 51862590 51862752 -51632222 + RSINE1 SINE B4 1 165 0 6 980 658 217 25 0 chr15 51862786 51862906 -51632068 + B3 SINE B2 2 124 -92 6 980 1457 60 33 0 chr15 51864461 51864643 -51630331 - B2_Mm1t SINE B2 -5 188 1 6 980 219 36 0 0 chr15 51865254 51865282 -51629692 + (A)n Simple_repeat Simple_repeat 1 28 0 6 980 195 42 0 0 chr15 51865287 51865311 -51629663 + (CAGA)n Simple_repeat Simple_repeat 1 24 0 6 980 907 134 0 0 chr15 51866333 51866460 -51628514 - B1_Mus1 SINE Alu -21 127 1 6 980 324 238 20 39 chr15 51866460 51866505 -51628469 - ORR1B1-int LTR MaLR -863 646 605 6 980 405 242 25 47 chr15 51866483 51866616 -51628358 - B3 SINE B2 -6 189 63 6 980 1426 81 16 5 chr15 51867191 51867378 -51627596 - B2_Mm1t SINE B2 -4 189 1 6 980 799 288 10 5 chr15 51867654 51867846 -51627128 + B3 SINE B2 18 210 -6 6 980 449 301 16 70 chr15 51868010 51868021 -51626953 - ID_B1 SINE B4 -1 223 213 6 980 461 62 15 0 chr15 51868021 51868086 -51626888 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 6 980 716 192 8 5 chr15 51868086 51868219 -51626755 - B1_Mur2 SINE Alu -12 137 9 6 980 449 301 16 70 chr15 51868219 51868260 -51626714 - ID_B1 SINE B4 -12 212 49 6 980 368 328 41 8 chr15 51868346 51868469 -51626505 + B1F SINE Alu 21 147 -2 6 980 217 321 19 0 chr15 51868470 51868523 -51626451 + ID4_ SINE ID 3 56 -27 6 980 222 246 0 0 chr15 51869936 51869997 -51624977 + CT-rich Low_complexity Low_complexity 2 62 0 6 980 939 276 75 8 chr15 51870019 51870285 -51624689 - B4A SINE B4 -8 284 1 6 980 429 309 94 43 chr15 51870534 51870767 -51624207 + MIR SINE MIR 3 247 -15 6 980 207 139 0 0 chr15 51871979 51872015 -51622959 + (CGG)n Simple_repeat Simple_repeat 2 37 0 6 980 273 217 0 0 chr15 51873883 51873942 -51621032 + Charlie24 DNA MER1_type 2381 2441 -9 6 980 198 143 0 0 chr15 51874518 51874553 -51620421 + (T)n Simple_repeat Simple_repeat 1 35 0 6 980 1206 69 0 0 chr15 51874555 51874700 -51620274 - B1_Mm SINE Alu 0 147 3 6 980 3101 77 52 63 chr15 51874751 51874896 -51620078 - RLTR9B LTR ERVK 0 437 288 6 980 1227 54 0 20 chr15 51874896 51875047 -51619927 + B1_Mus1 SINE Alu 1 148 0 6 980 3101 77 52 63 chr15 51875047 51875343 -51619631 - RLTR9B LTR ERVK -150 287 1 6 980 24 0 0 0 chr15 51876314 51876338 -51618636 + AT_rich Low_complexity Low_complexity 1 24 0 6 980 8751 121 36 4 chr15 51877409 51879101 -51615873 - Lx3C LINE L1 -7 6969 5221 6 980 505 157 11 0 chr15 51879100 51879189 -51615785 + Lx LINE L1 4262 4351 -1535 6 980 14079 155 47 3 chr15 51879172 51881668 -51613306 + L1_Mur1 LINE L1 1816 4422 -1464 6 980 48 32 0 0 chr15 51882283 51882345 -51612629 + AT_rich Low_complexity Low_complexity 1 62 0 6 980 192 77 0 0 chr15 51882567 51882593 -51612381 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 6 980 8676 123 23 2 chr15 51882808 51885008 -51609966 + Lx LINE L1 4414 6654 0 6 980 243 0 0 0 chr15 51886847 51886874 -51608100 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 6 980 2782 52 0 6 chr15 51886914 51887245 -51607729 + L1Md_F2 LINE L1 6242 6570 -12 6 980 658 265 154 18 chr15 51887285 51887512 -51607462 + B4A SINE B4 5 262 -30 6 980 342 0 0 0 chr15 51887527 51887565 -51607409 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 980 576 284 24 72 chr15 51887586 51887737 -51607237 + MTE2a LTR MaLR 1 147 -272 6 980 980 182 108 42 chr15 51887737 51887949 -51607025 + URR1A DNA MER1_type 1 226 0 6 980 576 218 0 95 chr15 51887949 51888021 -51606953 + MTE2a LTR MaLR 118 199 -220 6 980 2319 0 0 0 chr15 51888022 51888276 -51606698 - L1Md_A LINE L1 -716 5167 4914 6 980 3393 3 0 0 chr15 51888276 51888646 -51606328 + L1Md_A LINE L1 5217 5586 -297 6 980 9619 3 0 0 chr15 51888646 51889642 -51605332 + L1Md_A LINE L1 5587 6582 0 6 980 750 272 33 24 chr15 51889670 51889881 -51605093 + MTE2a LTR MaLR 167 379 0 6 980 245 317 5 22 chr15 51890038 51890148 -51604826 + MIRb SINE MIR 154 268 0 6 980 215 311 49 0 chr15 51890260 51890321 -51604653 - B4A SINE B4 -224 68 5 6 980 244 304 106 9 chr15 51890631 51890744 -51604230 - MIR SINE MIR -77 185 62 6 980 219 312 206 0 chr15 51891361 51891521 -51603453 + MIR SINE MIR 24 216 -46 6 980 210 160 0 0 chr15 51891995 51892045 -51602929 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 6 980 2985 240 63 26 chr15 51892380 51893162 -51601812 - Lx6 LINE L1 -620 6840 6030 6 980 1895 184 76 11 chr15 51893182 51893623 -51601351 + Lx6 LINE L1 5538 6007 -1453 6 980 737 76 9 0 chr15 51893883 51893988 -51600986 + (TCCCC)n Simple_repeat Simple_repeat 5 110 0 6 980 555 16 0 0 chr15 51894604 51894668 -51600306 + (TTTA)n Simple_repeat Simple_repeat 3 66 0 6 980 1162 95 6 0 chr15 51894668 51894826 -51600148 - B2_Mm1t SINE B2 -33 160 2 6 980 312 242 117 39 chr15 51895028 51895131 -51599843 + RLTR18B LTR ERVK 401 511 -1 6 980 843 317 94 40 chr15 51895206 51895788 -51599186 - L1MEc LINE L1 -5413 987 374 6 980 186 43 0 0 chr15 51897229 51897252 -51597722 + (TTCC)n Simple_repeat Simple_repeat 1 23 0 6 980 1037 140 6 0 chr15 51897252 51897430 -51597544 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 6 980 338 146 0 0 chr15 51897477 51897532 -51597442 - B2_Mm2 SINE B2 -94 101 47 6 980 1373 96 11 0 chr15 51897598 51897775 -51597199 - B2_Mm1t SINE B2 -14 179 1 6 980 916 280 101 6 chr15 51897792 51898137 -51596837 - L1MB5 LINE L1 -229 5945 5568 6 980 869 160 28 0 chr15 51899122 51899266 -51595708 + B1_Mur4 SINE Alu 1 148 -2 6 980 1263 62 7 0 chr15 51899346 51899492 -51595482 - B1_Mus2 SINE Alu 0 147 1 6 980 557 268 14 7 chr15 51899637 51899776 -51595198 + B1F1 SINE Alu 5 144 -5 6 980 233 311 54 0 chr15 51899964 51900038 -51594936 - LTR85b LTR Gypsy? -4 780 703 6 980 222 253 22 98 chr15 51900137 51900229 -51594745 + B3A SINE B2 2 86 -112 6 980 605 252 8 0 chr15 51900155 51900282 -51594692 + ID_B1 SINE B4 16 143 -81 6 980 1201 248 82 0 chr15 51900329 51900599 -51594375 + B4 SINE B4 1 292 0 6 980 3087 96 9 40 chr15 51900617 51901072 -51593902 + BGLII_B LTR ERVK 1 441 0 6 980 634 281 92 43 chr15 51901573 51901904 -51593070 - L1MA7 LINE L1 -30 6270 5902 6 980 207 0 0 0 chr15 51901907 51901930 -51593044 + (TTA)n Simple_repeat Simple_repeat 2 24 0 6 980 6485 99 2 2 chr15 51901930 51902819 -51592155 - L1Md_F2 LINE L1 -2 6580 5692 6 980 184 281 74 63 chr15 51902922 51903017 -51591957 + MIRb SINE MIR 2 97 -171 6 980 3551 45 2 0 chr15 51903054 51903453 -51591521 + MTB LTR MaLR 1 400 0 6 981 329 62 0 20 chr15 51905313 51905362 -51589612 + (TTA)n Simple_repeat Simple_repeat 2 49 0 6 981 237 381 48 26 chr15 51905578 51905807 -51589167 + LTR78 LTR ERV1 914 1147 -157 6 981 1006 295 108 9 chr15 51906050 51906375 -51588599 + MLT1A0 LTR MaLR 3 359 -6 6 981 738 329 148 44 chr15 51906618 51907231 -51587743 + MLT1A0-int LTR MaLR 1 677 -710 6 981 571 353 108 66 chr15 51907425 51908035 -51586939 + MLT1A0-int LTR MaLR 673 1308 -79 6 981 242 345 16 57 chr15 51908089 51908212 -51586762 + MLT1A0 LTR MaLR 17 134 -378 6 981 451 182 11 0 chr15 51908240 51908328 -51586646 - Lx7 LINE L1 -887 6809 6721 6 981 441 0 0 0 chr15 51908330 51908379 -51586595 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 981 672 86 0 0 chr15 51908379 51908483 -51586491 + (TG)n Simple_repeat Simple_repeat 2 106 0 6 981 731 307 110 26 chr15 51908910 51909558 -51585416 - L1M2 LINE L1 -2464 3679 2917 7 981 7796 94 3 4 chr15 51909556 51910764 -51584210 + L1_Mus3 LINE L1 5429 6636 -2 7 981 23 54 0 0 chr15 51911085 51911122 -51583852 + AT_rich Low_complexity Low_complexity 1 37 0 7 981 299 98 0 0 chr15 51911220 51911261 -51583713 - PB1D7 SINE Alu -4 116 76 7 981 558 271 38 0 chr15 51911263 51911396 -51583578 - B1F SINE Alu -9 140 3 7 981 1309 163 42 5 chr15 51911668 51911884 -51583090 + URR1B DNA MER1_type 1 224 -1 7 981 606 279 56 44 chr15 51911900 51912066 -51582908 + B3A SINE B2 11 180 -18 7 981 180 77 0 0 chr15 51912066 51912092 -51582882 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 981 606 279 56 44 chr15 51912092 51912105 -51582869 + B3A SINE B2 181 192 -6 7 981 2039 226 77 16 chr15 51912147 51912642 -51582332 + RLTR11A2 LTR ERVK 1 525 -2 7 981 279 0 0 0 chr15 51912671 51912702 -51582272 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 7 981 4199 206 25 4 chr15 51912702 51913504 -51581470 - Lx5 LINE L1 -19 7031 6213 7 981 3219 29 99 0 chr15 51913504 51913878 -51581096 + IAPLTR2_Mm LTR ERVK 1 411 0 7 981 1033 121 25 81 chr15 51913879 51914077 -51580897 + IAPEz-int LTR ERVK 9 195 -6286 7 981 250 302 0 0 chr15 51914077 51914130 -51580844 + RLTR27 LTR ERVK 223 275 -34 7 981 3668 57 4 17 chr15 51914130 51914709 -51580265 + IAPEz-int LTR ERVK 168 662 -5819 7 981 2706 67 0 3 chr15 51914709 51915052 -51579922 + IAPEz-int LTR ERVK 1359 1700 -4781 7 981 6420 67 12 11 chr15 51915045 51915873 -51579101 + IAPEz-int LTR ERVK 5651 6479 -2 7 981 3986 39 17 27 chr15 51915875 51916355 -51578619 + IAPLTR2_Mm LTR ERVK 1 475 0 7 981 233 214 70 97 chr15 51916356 51916470 -51578504 - Lx5 LINE L1 -855 6195 6085 7 981 414 0 0 0 chr15 51916562 51916608 -51578366 + (GA)n Simple_repeat Simple_repeat 1 46 0 7 981 260 279 74 96 chr15 51916842 51916977 -51577997 - RMER4B LTR ERVK -107 478 347 7 981 901 294 46 10 chr15 51917092 51917398 -51577576 - RodERV21-int LTR ERV1 -274 4717 4401 7 981 988 328 53 62 chr15 51917393 51918052 -51576922 - RodERV21-int LTR ERV1 -1455 3536 2884 7 981 28 0 0 0 chr15 51918990 51919018 -51575956 + AT_rich Low_complexity Low_complexity 1 28 0 7 981 276 357 6 6 chr15 51919018 51919187 -51575787 - RLTR4_MM-int LTR ERV1 -3963 3638 3470 7 981 391 371 12 38 chr15 51919428 51919560 -51575414 - RodERV21-int LTR ERV1 -3017 4074 3941 7 981 3303 84 43 2 chr15 51919560 51919979 -51574995 + RLTR9B LTR ERVK 2 437 0 7 981 391 371 12 38 chr15 51919979 51920348 -51574626 - RodERV21-int LTR ERV1 -3151 3940 3587 7 981 1026 266 42 60 chr15 51920418 51920821 -51574153 - RodERV21-int LTR ERV1 -2226 2765 2370 7 981 5047 274 46 61 chr15 51921594 51923264 -51571710 - RodERV21-int LTR ERV1 -2606 2385 741 7 981 7218 131 24 104 chr15 51923264 51923325 -51571649 - L1_Mur2 LINE L1 -1538 4339 4278 7 981 426 53 0 0 chr15 51923325 51923382 -51571592 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 7 981 7218 131 24 104 chr15 51923382 51924851 -51570123 - L1_Mur2 LINE L1 -1600 4277 2934 7 981 1529 220 93 46 chr15 51924911 51925413 -51569561 - RLTR20A LTR ERVK 0 541 1 7 981 276 208 0 0 chr15 51925462 51925515 -51569459 - RLTR15 LTR ERVK -306 53 1 7 981 2142 262 68 22 chr15 51925515 51926405 -51568569 - Lx8 LINE L1 -1558 5915 4963 7 981 851 306 12 30 chr15 51926415 51926756 -51568218 + L1_Mur3 LINE L1 4600 4932 -945 7 981 180 158 0 0 chr15 51926892 51926930 -51568044 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 981 283 217 9 9 chr15 51926990 51927097 -51567877 + (TG)n Simple_repeat Simple_repeat 2 108 0 7 981 5121 117 109 11 chr15 51928204 51929029 -51565945 + RMER17A2 LTR ERVK 1 906 0 7 981 471 78 0 0 chr15 51929110 51929174 -51565800 + (TC)n Simple_repeat Simple_repeat 1 64 0 7 981 259 309 91 57 chr15 51929817 51930047 -51564927 + L1MEg LINE L1 674 911 -5173 7 981 905 204 79 30 chr15 51930879 51931081 -51563893 + B3 SINE B2 2 213 -3 7 981 744 229 57 51 chr15 51931292 51931573 -51563401 - L1MA8 LINE L1 -2 6298 6030 7 981 268 57 56 19 chr15 51931595 51931649 -51563325 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 7 981 973 54 0 23 chr15 51931690 51931823 -51563151 - B2_Mm2 SINE B2 -64 131 2 7 981 12109 14 1 0 chr15 51932182 51933541 -51561433 + L1Md_A LINE L1 4227 5586 -297 7 981 9012 30 1 0 chr15 51933541 51934536 -51560438 + L1Md_A LINE L1 5587 6582 0 7 981 693 262 102 49 chr15 51935080 51935453 -51559521 - L1MA8 LINE L1 -204 5985 5598 7 981 197 33 33 0 chr15 51935453 51935483 -51559491 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 981 693 256 106 48 chr15 51935483 51935551 -51559423 - L1MA8 LINE L1 -706 5597 5532 7 981 350 290 132 132 chr15 51936815 51937125 -51557849 + MLT1C LTR MaLR 54 440 -27 7 981 441 198 0 0 chr15 51937222 51937348 -51557626 + (CA)n Simple_repeat Simple_repeat 2 127 0 7 981 792 65 0 0 chr15 51937348 51937455 -51557519 + (GA)n Simple_repeat Simple_repeat 2 108 0 7 981 340 124 0 43 chr15 51937929 51938022 -51556952 + (TCTCTG)n Simple_repeat Simple_repeat 2 90 0 7 981 732 244 0 81 chr15 51938023 51938197 -51556777 - RSINE1 SINE B4 -4 161 2 7 981 3253 214 28 28 chr15 51938225 51938933 -51556041 + RMER1C Other Other 620 1327 -15 7 981 1036 291 31 11 chr15 51939483 51939841 -51555133 - Lx8 LINE L1 -1 7472 7108 7 981 241 258 14 70 chr15 51940240 51940311 -51554663 + L2a LINE L2 3353 3419 -7 7 981 2879 132 45 2 chr15 51941078 51941548 -51553426 - RLTR28 LTR ERVL -32 492 3 7 981 23 33 0 0 chr15 51943349 51943379 -51551595 + AT_rich Low_complexity Low_complexity 1 30 0 7 981 346 318 74 41 chr15 51943456 51943699 -51551275 - L1MB8 LINE L1 -6 6172 5922 7 981 1692 206 82 6 chr15 51943757 51944123 -51550851 + MTD LTR MaLR 2 395 -24 7 981 248 294 73 73 chr15 51944291 51944401 -51550573 - MLT1J LTR MaLR -193 319 210 7 981 229 345 92 25 chr15 51945569 51945688 -51549286 + MIRb SINE MIR 34 160 -108 7 981 378 0 0 0 chr15 51946621 51946663 -51548311 + (T)n Simple_repeat Simple_repeat 1 42 0 7 981 7325 82 4 1 chr15 51947104 51948060 -51546914 - L1_Mus2 LINE L1 -3 6563 5605 7 981 34 0 0 0 chr15 51948212 51948246 -51546728 + AT_rich Low_complexity Low_complexity 1 34 0 7 981 1788 266 54 9 chr15 51948249 51948835 -51546139 - Lx6 LINE L1 -26 7434 6455 7 981 324 0 0 0 chr15 51948839 51948875 -51546099 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 981 1430 94 16 10 chr15 51948939 51949132 -51545842 - B2_Mm2 SINE B2 0 195 2 7 981 8031 54 3 6 chr15 51949141 51950224 -51544750 - L1Md_F2 LINE L1 -2 6580 5501 7 981 530 42 0 27 chr15 51950317 51950344 -51544630 + (TTC)n Simple_repeat Simple_repeat 1 26 0 7 981 1107 134 0 0 chr15 51950344 51950523 -51544451 + (TCC)n Simple_repeat Simple_repeat 2 180 0 7 981 530 42 0 27 chr15 51950523 51950569 -51544405 + (TTC)n Simple_repeat Simple_repeat 3 48 0 7 981 237 65 0 0 chr15 51951474 51951505 -51543469 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 981 470 348 132 66 chr15 51951558 51951719 -51543255 - B4A SINE B4 -20 272 92 7 981 5296 40 0 3 chr15 51951719 51952321 -51542653 - L1Md_F3 LINE L1 0 6584 5985 7 981 470 348 132 66 chr15 51952321 51952402 -51542572 - B4A SINE B4 -201 91 14 7 981 508 310 78 78 chr15 51952485 51952842 -51542132 + ORR1D2 LTR MaLR 6 362 -8 7 981 4703 126 34 16 chr15 51953204 51953945 -51541029 - RMER6A LTR ERVK -2 754 1 7 981 180 0 0 0 chr15 51955238 51955258 -51539716 + (A)n Simple_repeat Simple_repeat 1 20 0 7 981 1249 68 0 0 chr15 51955338 51955484 -51539490 + B1_Mus2 SINE Alu 2 147 0 7 981 245 131 16 0 chr15 51955489 51955550 -51539424 + (CAAA)n Simple_repeat Simple_repeat 2 63 0 7 981 611 112 0 8 chr15 51955696 51955813 -51539161 + (CA)n Simple_repeat Simple_repeat 2 117 0 7 981 26 0 0 0 chr15 51956266 51956292 -51538682 + AT_rich Low_complexity Low_complexity 1 26 0 7 981 306 289 57 19 chr15 51956645 51956751 -51538223 + MTEa LTR MaLR 72 181 -198 7 981 38771 17 3 7 chr15 51956751 51962352 -51532622 + L1Md_A LINE L1 8 5586 -297 7 981 9284 18 1 0 chr15 51962352 51963347 -51531627 + L1Md_A LINE L1 5587 6582 0 7 981 838 257 9 32 chr15 51963376 51963597 -51531377 + MTEa LTR MaLR 164 379 0 7 981 1238 179 126 74 chr15 51964558 51964910 -51530064 - ORR1D1 LTR MaLR -16 358 1 7 981 375 187 81 19 chr15 51964940 51965044 -51529930 + MIRb SINE MIR 40 160 -108 7 981 597 72 0 0 chr15 51965646 51965729 -51529245 + (TCCC)n Simple_repeat Simple_repeat 4 86 0 7 981 1275 89 0 0 chr15 51965729 51965907 -51529067 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 7 981 264 122 0 0 chr15 51965907 51965948 -51529026 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 981 24 53 0 0 chr15 51966101 51966139 -51528835 + AT_rich Low_complexity Low_complexity 1 38 0 7 981 519 60 0 0 chr15 51966274 51966341 -51528633 + (TG)n Simple_repeat Simple_repeat 2 68 0 7 981 372 247 21 41 chr15 51966417 51966514 -51528460 - B2_Mm2 SINE B2 -99 96 2 7 981 1230 188 14 5 chr15 51966513 51966732 -51528242 + URR1A DNA MER1_type 1 221 -5 7 981 3709 47 35 15 chr15 51967237 51967693 -51527281 - L1_Mus2 LINE L1 0 6566 6102 7 981 1184 271 40 106 chr15 51967809 51968205 -51526769 - MTE2b LTR MaLR -9 370 1 7 981 233 75 25 0 chr15 51969045 51969085 -51525889 + (CATA)n Simple_repeat Simple_repeat 4 44 0 7 981 267 31 0 0 chr15 51969643 51969675 -51525299 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 7 981 219 266 94 0 chr15 51970724 51970788 -51524186 + MIR SINE MIR 48 117 -91 7 981 278 355 32 19 chr15 51970861 51971019 -51523955 - MIRb SINE MIR -36 232 73 7 981 269 319 148 41 chr15 51971914 51972110 -51522864 + MIRb SINE MIR 22 238 -30 7 981 26045 139 26 39 chr15 51972465 51973875 -51521099 + L1_Mus4 LINE L1 651 2064 -3819 7 981 426 239 9 35 chr15 51973875 51973988 -51520986 + RLTR9D LTR ERVK 190 299 -104 7 981 26045 139 26 39 chr15 51973988 51976334 -51518640 + L1_Mus4 LINE L1 2065 4420 -1463 7 981 7948 80 23 2 chr15 51976334 51977336 -51517638 + RLTR13D5 LTR ERVK 1 1023 0 7 981 26045 134 15 36 chr15 51977336 51978874 -51516100 + L1_Mus4 LINE L1 4421 5953 -683 7 981 2600 92 59 18 chr15 51978875 51979262 -51515712 + L1_Mus4 LINE L1 6249 6651 -3 7 981 1031 147 183 5 chr15 51980399 51980590 -51514384 - URR1B DNA MER1_type 0 225 1 7 981 240 324 14 0 chr15 51980756 51980830 -51514144 - ID SINE ID -149 75 1 7 981 21 0 0 0 chr15 51980973 51980994 -51513980 + AT_rich Low_complexity Low_complexity 1 21 0 7 981 318 273 10 0 chr15 51981100 51981199 -51513775 - L1MA5 LINE L1 -2 6298 6199 7 981 222 304 0 0 chr15 51982335 51982404 -51512570 + (TG)n Simple_repeat Simple_repeat 2 70 0 7 981 553 302 20 39 chr15 51982433 51982636 -51512338 - B4A SINE B4 -66 226 28 7 981 384 327 81 14 chr15 51982689 51982912 -51512062 + L1MB5 LINE L1 5846 6083 -91 7 981 264 224 29 43 chr15 51982983 51983053 -51511921 + L1MB5 LINE L1 6089 6157 -17 7 981 421 353 58 29 chr15 51983060 51983337 -51511637 + MLT1D LTR MaLR 176 460 -45 7 981 459 0 0 0 chr15 51985462 51985513 -51509461 + (TG)n Simple_repeat Simple_repeat 2 52 0 8 981 632 214 0 8 chr15 51985679 51985806 -51509168 - RSINE1 SINE B4 -36 129 4 8 981 534 79 0 0 chr15 51985815 51985891 -51509083 + (TCC)n Simple_repeat Simple_repeat 3 78 0 8 981 297 221 44 0 chr15 51985950 51986018 -51508956 - L1M5 LINE L1 -382 5742 5672 8 981 1124 204 9 0 chr15 51988071 51988292 -51506682 - URR1A DNA MER1_type -3 223 1 8 981 301 280 23 99 chr15 51988292 51988423 -51506551 + MER5A1 DNA MER1_type 46 166 0 8 981 369 43 0 0 chr15 51988704 51988751 -51506223 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 981 339 25 0 0 chr15 51989699 51989739 -51505235 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 981 405 0 0 0 chr15 51989739 51989783 -51505191 + (GA)n Simple_repeat Simple_repeat 1 45 0 8 981 2898 185 92 13 chr15 51989793 51990402 -51504572 + Lx5 LINE L1 6339 6995 -55 8 981 459 0 0 0 chr15 51990453 51990504 -51504470 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 981 349 311 140 83 chr15 51994294 51994715 -51500259 - MLT1M LTR MaLR -186 486 42 8 981 514 63 25 0 chr15 51995231 51995310 -51499664 + (CA)n Simple_repeat Simple_repeat 2 82 0 8 981 507 73 0 0 chr15 51995726 51995794 -51499180 + (TC)n Simple_repeat Simple_repeat 1 68 0 8 981 1917 103 73 159 chr15 51996026 51996079 -51498895 - ORR1A2 LTR MaLR 0 327 277 8 981 1425 81 36 31 chr15 51996079 51996271 -51498703 - B2_Mm2 SINE B2 -2 193 1 8 981 1917 103 73 159 chr15 51996271 51996575 -51498399 - ORR1A2 LTR MaLR -51 276 1 8 981 384 313 20 0 chr15 51997086 51997185 -51497789 - Lx8 LINE L1 -144 7329 7229 8 981 222 37 0 0 chr15 51997643 51997670 -51497304 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 981 186 284 165 33 chr15 51998005 51998096 -51496878 - MIRb SINE MIR -79 189 87 8 981 337 342 56 72 chr15 51999680 51999929 -51495045 + MER20B DNA MER1_type 213 457 -326 8 981 482 295 17 11 chr15 52000000 52000178 -51494796 + MER20B DNA MER1_type 544 722 -61 1 981 22 0 0 0 chr15 52000241 52000263 -51494711 + AT_rich Low_complexity Low_complexity 1 22 0 2 981 882 143 102 84 chr15 52000268 52000376 -51494598 - Lx9 LINE L1 -2 7642 7542 3 981 425 0 55 0 chr15 52000376 52000431 -51494543 + (TTTTG)n Simple_repeat Simple_repeat 1 58 0 4 981 1068 94 0 0 chr15 52000440 52000578 -51494396 - B1_Mus1 SINE Alu -10 138 1 5 981 882 143 102 84 chr15 52000578 52000733 -51494241 - Lx9 LINE L1 -103 7541 7364 3 981 277 175 18 0 chr15 52000729 52000786 -51494188 + Lx9 LINE L1 7297 7354 -290 3 981 594 308 45 36 chr15 52000919 52001141 -51493833 + Tigger7 DNA MER2_type 2 225 -2266 6 981 202 154 26 0 chr15 52001163 52001202 -51493772 + (TAGA)n Simple_repeat Simple_repeat 3 42 0 7 981 245 190 200 0 chr15 52001212 52001312 -51493662 + Tigger7 DNA MER2_type 2265 2384 -107 6 981 1050 77 0 40 chr15 52001331 52001480 -51493494 - B1_Mm SINE Alu 0 147 5 8 981 463 239 102 9 chr15 52001773 52002006 -51492968 - L1MC3 LINE L1 -663 7122 6873 9 981 1237 100 39 0 chr15 52002006 52002186 -51492788 - B2_Mm1t SINE B2 -6 187 1 1 981 299 282 196 21 chr15 52002186 52002361 -51492613 - L1MC3 LINE L1 -1102 6893 6668 9 981 1557 99 0 8 chr15 52002575 52002809 -51492165 + Lx LINE L1 6415 6646 -8 1 981 365 330 36 0 chr15 52003073 52003185 -51491789 + PB1D10 SINE Alu 1 116 -1 1 981 1047 99 17 0 chr15 52003736 52003908 -51491066 + (GA)n Simple_repeat Simple_repeat 1 175 0 1 981 268 356 65 26 chr15 52003919 52004072 -51490902 + MIRb SINE MIR 38 196 -72 1 981 1030 101 151 0 chr15 52006501 52006660 -51488314 - B2_Mm2 SINE B2 -8 187 5 1 981 1478 153 16 8 chr15 52006660 52006910 -51488064 + LSU-rRNA_Hsa rRNA rRNA 1504 1755 -3280 1 981 543 322 55 6 chr15 52007073 52007254 -51487720 - MLT1A0 LTR MaLR 0 365 176 1 981 276 262 24 12 chr15 52007342 52007427 -51487547 - L1M2 LINE L1 -573 5718 5633 1 981 667 267 15 7 chr15 52007614 52007750 -51487224 - B3A SINE B2 -60 138 2 1 981 225 311 66 0 chr15 52007772 52007894 -51487080 - L1MA9 LINE L1 -282 6030 5901 2 981 853 224 70 0 chr15 52007946 52008147 -51486827 + B3 SINE B2 2 216 0 2 981 198 0 0 0 chr15 52010047 52010069 -51484905 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 981 481 321 29 22 chr15 52010154 52010291 -51484683 - ID_B1 SINE B4 -7 217 80 2 981 32 26 0 0 chr15 52010710 52010749 -51484225 + AT_rich Low_complexity Low_complexity 1 39 0 2 981 1308 293 49 16 chr15 52011782 52012268 -51482706 - RMER5 LTR ERV1 0 534 33 2 981 252 319 104 16 chr15 52014079 52014261 -51480713 + LTR81B LTR ERV1? 1167 1364 -29 2 981 964 297 25 31 chr15 52015733 52016056 -51478918 + RMER15 LTR ERVL 226 546 -29 2 981 312 188 0 0 chr15 52016065 52016134 -51478840 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 981 225 0 0 0 chr15 52016259 52016284 -51478690 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2 981 329 373 105 35 chr15 52016541 52016855 -51478119 + MLT1K LTR MaLR 216 551 -44 3 981 845 32 103 88 chr15 52017032 52017168 -51477806 - B1_Mus1 SINE Alu -10 138 1 3 981 196 346 45 27 chr15 52018374 52018484 -51476490 + L2 LINE L2 2465 2576 -843 3 981 766 28 0 18 chr15 52018738 52018887 -51476087 + L1Md_T LINE L1 6475 6582 0 3 981 413 262 32 32 chr15 52019253 52019407 -51475567 - MER115 DNA Tip100 -44 649 496 3 981 22 56 0 0 chr15 52019828 52019864 -51475110 + AT_rich Low_complexity Low_complexity 1 36 0 3 981 440 318 37 57 chr15 52020255 52020518 -51474456 - MLT1H LTR MaLR -249 300 1 3 981 258 156 0 0 chr15 52020710 52020755 -51474219 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 981 463 318 25 19 chr15 52020845 52021002 -51473972 + RSINE1 SINE B4 8 165 0 3 981 22 80 0 0 chr15 52021273 52021323 -51473651 + AT_rich Low_complexity Low_complexity 1 50 0 3 981 622 308 60 41 chr15 52021571 52021842 -51473132 - MLT2B1 LTR ERVL -15 505 218 4 981 203 125 0 24 chr15 52021849 52021890 -51473084 + (GGGAGA)n Simple_repeat Simple_repeat 4 43 0 4 981 755 279 98 141 chr15 52021938 52022334 -51472640 + MTE2a LTR MaLR 1 379 0 4 981 591 273 53 35 chr15 52022334 52022411 -51472563 - MLT2B1 LTR ERVL -346 174 98 4 981 1303 35 18 0 chr15 52022411 52022581 -51472393 - L1Md_F3 LINE L1 0 6584 6412 4 981 591 273 53 35 chr15 52022581 52022674 -51472300 - MLT2B1 LTR ERVL -423 97 1 4 981 296 349 18 54 chr15 52023922 52024034 -51470940 - MER2B DNA MER2_type 0 336 229 4 981 582 203 0 0 chr15 52024064 52024187 -51470787 + (TA)n Simple_repeat Simple_repeat 1 123 0 4 981 1151 84 0 33 chr15 52024386 52024570 -51470404 - L1Md_F2 LINE L1 -3 6579 6402 4 981 585 303 20 7 chr15 52024609 52024762 -51470212 - RSINE1 SINE B4 -3 162 8 4 981 255 156 46 15 chr15 52025785 52025850 -51469124 + CT-rich Low_complexity Low_complexity 3 69 0 4 981 401 0 20 0 chr15 52026184 52026233 -51468741 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 981 516 56 0 0 chr15 52027011 52027083 -51467891 + (CA)n Simple_repeat Simple_repeat 1 72 0 5 981 186 118 0 0 chr15 52027093 52027127 -51467847 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 981 474 124 23 167 chr15 52027315 52027489 -51467485 + Lx7 LINE L1 7442 7590 -106 5 981 336 316 156 41 chr15 52027489 52027707 -51467267 + Kanga1b DNA Tc2 20 262 -517 5 981 889 278 78 33 chr15 52027727 52028125 -51466849 + Kanga1b DNA Tc2 318 733 -46 5 981 603 343 73 33 chr15 52029492 52029601 -51465373 - MLT1A LTR MaLR -8 366 251 5 981 207 0 0 0 chr15 52029601 52029624 -51465350 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 981 603 343 73 33 chr15 52029624 52029843 -51465131 - MLT1A LTR MaLR -124 250 25 5 981 321 330 80 71 chr15 52029867 52030079 -51464895 - Charlie8 DNA MER1_type -2147 281 68 5 981 725 293 88 13 chr15 52031068 52031386 -51463588 + Lx7 LINE L1 6944 7285 -411 5 981 216 158 0 0 chr15 52031406 52031444 -51463530 + (CAA)n Simple_repeat Simple_repeat 1 38 0 5 981 218 274 16 0 chr15 52031991 52032053 -51462921 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 981 582 386 107 10 chr15 52032070 52032481 -51462493 + LTR16A LTR ERVL 1 451 0 6 981 281 339 27 18 chr15 52032588 52032699 -51462275 + MLT1I LTR MaLR 298 409 -2 6 981 306 319 164 96 chr15 52033424 52033674 -51461300 + ORR1E LTR MaLR 93 359 0 6 981 246 62 0 0 chr15 52035506 52035538 -51459436 + (TATG)n Simple_repeat Simple_repeat 2 33 0 6 122 3255 111 51 18 chr15 52035548 52036062 -51458912 - Lx2 LINE L1 0 6997 6467 6 982 929 260 127 32 chr15 52036593 52036931 -51458043 - ORR1D2 LTR MaLR 0 370 1 6 982 238 167 26 44 chr15 52037963 52038076 -51456898 + GA-rich Low_complexity Low_complexity 2 112 0 6 982 396 0 0 0 chr15 52038134 52038178 -51456796 + (GA)n Simple_repeat Simple_repeat 1 44 0 6 982 213 139 0 0 chr15 52038300 52038343 -51456631 + (A)n Simple_repeat Simple_repeat 1 43 0 6 982 374 255 48 34 chr15 52039366 52039512 -51455462 + MTE2a LTR MaLR 1 148 -271 6 982 3668 139 53 5 chr15 52039517 52040125 -51454849 + L1VL2 LINE L1 178 814 -5521 7 982 18181 147 6 42 chr15 52040115 52040743 -51454231 + L1_Mm LINE L1 2392 3023 -2860 7 982 3421 35 2 0 chr15 52040743 52041138 -51453836 - MTA_Mm LTR MaLR 0 396 1 7 982 18181 147 6 42 chr15 52041138 52041205 -51453769 + L1_Mm LINE L1 3024 3090 -2793 7 982 981 62 108 0 chr15 52041205 52041335 -51453639 + B1_Mus1 SINE Alu 5 148 0 7 982 18181 147 6 42 chr15 52041335 52042598 -51452376 + L1_Mm LINE L1 3091 4277 -1606 7 982 1137 55 27 0 chr15 52042598 52042744 -51452230 + B1_Mur4 SINE Alu 1 150 0 7 982 18181 147 6 42 chr15 52042744 52042875 -51452099 + L1_Mm LINE L1 4278 4382 -1501 7 982 1576 128 28 4 chr15 52042875 52043127 -51451847 + L1_Mus3 LINE L1 6373 6630 -8 7 982 18181 147 6 42 chr15 52043127 52043140 -51451834 + L1_Mm LINE L1 4383 4383 -1500 7 982 288 0 0 0 chr15 52043140 52043172 -51451802 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 7 982 18181 147 6 42 chr15 52043172 52044596 -51450378 + L1_Mm LINE L1 4383 5795 -88 7 982 1214 61 0 0 chr15 52044596 52044760 -51450214 + L1Md_F2 LINE L1 6419 6582 0 7 982 5097 132 23 22 chr15 52044764 52045634 -51449340 + Lx LINE L1 5783 6653 -1 7 982 766 218 125 57 chr15 52045640 52045888 -51449086 + MTE2a LTR MaLR 108 372 -7 6 982 239 191 63 0 chr15 52046054 52046117 -51448857 + L2a LINE L2 2769 2835 -584 7 982 285 269 51 0 chr15 52046375 52046453 -51448521 - ID SINE ID -141 83 2 8 982 221 277 0 0 chr15 52046520 52046567 -51448407 - L2b LINE L2 0 3375 3329 8 982 672 319 141 28 chr15 52046571 52046890 -51448084 - MLT1A0 LTR MaLR 0 365 11 8 982 196 235 127 42 chr15 52047022 52047093 -51447881 + L2a LINE L2 3344 3420 -6 7 982 219 277 92 0 chr15 52047591 52047656 -51447318 + L2c LINE L2 3309 3379 -8 8 982 893 171 0 13 chr15 52047841 52048067 -51446907 + CT-rich Low_complexity Low_complexity 1 222 0 8 982 1128 128 0 0 chr15 52048067 52048246 -51446728 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 8 982 615 271 105 46 chr15 52048297 52048603 -51446371 + MER45B DNA Tip100 463 786 -254 8 982 568 153 107 0 chr15 52048610 52048741 -51446233 - Lx2 LINE L1 -20 6977 6833 8 982 647 233 79 37 chr15 52048764 52048978 -51445996 + MER45B DNA Tip100 809 1031 -9 8 982 198 71 0 0 chr15 52049337 52049365 -51445609 + (GCTTG)n Simple_repeat Simple_repeat 4 31 0 8 982 778 109 0 14 chr15 52049366 52049505 -51445469 + (TTTTC)n Simple_repeat Simple_repeat 3 139 0 8 982 1189 41 7 0 chr15 52049505 52049650 -51445324 - B1_Mus2 SINE Alu 0 147 2 9 982 315 312 81 18 chr15 52049839 52049950 -51445024 + B4A SINE B4 2 119 -173 9 982 315 0 0 0 chr15 52050038 52050073 -51444901 + (CA)n Simple_repeat Simple_repeat 2 36 0 9 982 9775 92 11 13 chr15 52050310 52051780 -51443194 - Lx3_Mus LINE L1 0 7009 5543 9 982 335 306 0 124 chr15 52052673 52052770 -51442204 + RSINE1 SINE B4 81 165 0 9 982 290 26 0 25 chr15 52052792 52052832 -51442142 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 9 982 1347 302 77 12 chr15 52053260 52053830 -51441144 + Lx8 LINE L1 6674 7280 -193 9 982 5410 47 1 3 chr15 52053935 52054602 -51440372 - L1Md_F2 LINE L1 -3 6579 5914 9 982 23 33 0 0 chr15 52054751 52054781 -51440193 + AT_rich Low_complexity Low_complexity 1 30 0 9 982 2296 79 22 9 chr15 52054781 52055101 -51439873 - L1Md_F2 LINE L1 -15 6567 6244 9 982 1316 122 408 11 chr15 52055139 52055421 -51439553 - ORR1B1 LTR MaLR 0 394 1 1 982 243 0 0 0 chr15 52056009 52056036 -51438938 + (A)n Simple_repeat Simple_repeat 1 27 0 1 982 647 120 200 0 chr15 52056815 52056940 -51438034 + Lx9 LINE L1 7312 7461 -183 1 982 402 69 0 0 chr15 52056942 52057000 -51437974 + (TATG)n Simple_repeat Simple_repeat 3 60 0 1 982 279 200 116 0 chr15 52057009 52057104 -51437870 + Lx9 LINE L1 7538 7643 -1 1 982 287 254 0 16 chr15 52057123 52057187 -51437787 + ID4 SINE ID 15 77 -6 1 982 392 330 64 41 chr15 52058063 52058281 -51436693 - MLT1C LTR MaLR -25 442 220 1 982 231 146 0 0 chr15 52058282 52058323 -51436651 + (CCCCCT)n Simple_repeat Simple_repeat 6 46 0 1 982 268 244 0 170 chr15 52058326 52058420 -51436554 - B4 SINE B4 -1 291 214 1 982 622 223 65 65 chr15 52058514 52058730 -51436244 - Lx2B LINE L1 0 7000 6785 1 982 27 0 0 0 chr15 52058730 52058757 -51436217 + AT_rich Low_complexity Low_complexity 1 27 0 1 982 605 178 154 75 chr15 52058757 52058850 -51436124 - B4 SINE B4 -69 223 106 1 982 2233 177 37 7 chr15 52058850 52059259 -51435715 - MTC LTR MaLR 0 421 1 1 982 605 178 154 75 chr15 52059259 52059353 -51435621 - B4 SINE B4 -187 105 21 1 982 558 0 0 0 chr15 52059516 52059578 -51435396 + (GA)n Simple_repeat Simple_repeat 1 62 0 1 982 853 326 78 136 chr15 52059649 52060419 -51434555 - MLT1C-int LTR MaLR -16 1355 631 1 982 6432 154 51 19 chr15 52060421 52061015 -51433959 + Lx5 LINE L1 5509 6150 -900 1 982 612 27 0 0 chr15 52061015 52061089 -51433885 + (TG)n Simple_repeat Simple_repeat 2 75 0 1 982 6432 187 60 22 chr15 52061089 52061982 -51432992 + Lx5 LINE L1 6151 7050 0 1 982 615 274 63 14 chr15 52061992 52062214 -51432760 - MLT1C-int LTR MaLR -737 634 402 1 982 599 287 134 22 chr15 52062238 52062342 -51432632 - Lx8 LINE L1 -8 7465 7361 1 982 195 42 0 0 chr15 52062342 52062366 -51432608 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 1 982 599 287 134 22 chr15 52062366 52062582 -51432392 - Lx8 LINE L1 -113 7360 7110 1 982 3406 191 70 7 chr15 52062648 52062760 -51432214 - RMER1A Other Other -5 1025 896 1 982 237 108 0 0 chr15 52062760 52062797 -51432177 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 982 3406 194 75 6 chr15 52062797 52063511 -51431463 - RMER1A Other Other -135 895 17 1 982 2260 50 0 90 chr15 52063513 52063846 -51431128 + RLTR10E LTR ERVK 1 303 -8 1 982 354 268 36 0 chr15 52063846 52063958 -51431016 - RMER1A Other Other -754 276 161 1 982 1409 251 126 53 chr15 52064056 52064425 -51430549 - RMER1B Other Other -586 480 74 1 982 5617 44 13 0 chr15 52064425 52065111 -51429863 - L1Md_T LINE L1 0 6582 5888 1 982 1409 249 112 59 chr15 52065111 52065274 -51429700 - RMER1B Other Other -903 163 1 1 982 621 265 103 23 chr15 52065648 52065954 -51429020 - MLT1C-int LTR MaLR -1422 313 4 1 982 251 314 0 0 chr15 52065986 52066056 -51428918 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 982 583 255 204 28 chr15 52066075 52066366 -51428608 - MLT2C2 LTR ERVL -58 339 1 1 982 25 0 0 0 chr15 52066759 52066784 -51428190 + AT_rich Low_complexity Low_complexity 1 25 0 1 982 2763 152 59 73 chr15 52067226 52067802 -51427172 - RLTR12A LTR ERVK 0 568 1 1 982 362 253 16 29 chr15 52069666 52069830 -51425144 + B3 SINE B2 15 205 -11 1 982 260 378 154 25 chr15 52070002 52070287 -51424687 - MLT1K LTR MaLR -204 391 70 1 982 196 322 0 43 chr15 52070359 52070453 -51424521 - MIRb SINE MIR -99 169 80 1 982 780 297 17 47 chr15 52070829 52071129 -51423845 - B4A SINE B4 0 292 2 1 982 730 245 0 0 chr15 52071297 52071440 -51423534 + B1_Mur2 SINE Alu 1 143 -6 1 982 279 54 0 0 chr15 52071445 52071482 -51423492 + (CCAA)n Simple_repeat Simple_repeat 2 38 0 1 982 2457 202 16 10 chr15 52073026 52073530 -51421444 + Lx5 LINE L1 6393 6899 -151 1 982 391 237 0 62 chr15 52073530 52073611 -51421363 + B3 SINE B2 114 189 -27 1 982 291 114 0 0 chr15 52074483 52074527 -51420447 + (TTTTC)n Simple_repeat Simple_repeat 3 46 0 1 982 192 374 0 62 chr15 52074671 52074768 -51420206 - L2c LINE L2 -1 3386 3296 1 982 492 260 75 0 chr15 52074770 52074916 -51420058 + MER5A1 DNA MER1_type 4 160 -6 1 982 605 315 57 25 chr15 52074940 52075223 -51419751 + B4A SINE B4 1 292 0 1 982 448 121 22 0 chr15 52075223 52075314 -51419660 + (CA)n Simple_repeat Simple_repeat 1 93 0 1 982 366 64 0 0 chr15 52075338 52075385 -51419589 + HAL1-3A_ME LINE L1 1976 2022 -836 1 982 191 364 62 7 chr15 52075470 52075614 -51419360 + MIRc SINE MIR 65 216 -52 1 982 1519 277 41 3 chr15 52077025 52077416 -51417558 + MTD LTR MaLR 14 419 0 1 982 1262 292 99 53 chr15 52077418 52078233 -51416741 + MTD-int LTR MaLR 1 958 -300 1 982 641 294 21 21 chr15 52078245 52078433 -51416541 - B3 SINE B2 -2 214 27 1 982 2390 127 8 14 chr15 52078444 52078812 -51416162 - RLTR17 LTR ERVK -326 366 1 1 982 375 188 31 0 chr15 52078882 52078946 -51416028 - B3 SINE B2 -145 71 6 1 982 236 242 0 29 chr15 52078958 52079026 -51415948 + MTD-int LTR MaLR 956 1021 -237 1 982 14627 51 1 3 chr15 52079026 52081631 -51413343 - L1Md_F2 LINE L1 -5 6577 3977 1 982 417 250 104 48 chr15 52081631 52081876 -51413098 + MTD-int LTR MaLR 1069 1252 -6 1 982 1571 257 35 12 chr15 52081876 52082278 -51412696 + MTD LTR MaLR 1 411 -8 1 982 26 30 0 0 chr15 52082793 52082826 -51412148 + AT_rich Low_complexity Low_complexity 1 33 0 1 982 251 339 76 8 chr15 52082933 52083052 -51411922 - MIR SINE MIR -21 241 115 1 982 1295 48 0 6 chr15 52083182 52083350 -51411624 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 1 982 216 189 0 0 chr15 52084812 52084849 -51410125 + B3A SINE B2 2 38 -160 1 982 1688 151 3 3 chr15 52084850 52085192 -51409782 + L1Md_F2 LINE L1 405 967 -5757 1 982 17833 65 0 0 chr15 52085175 52087609 -51407365 + L1Md_F2 LINE L1 3151 5585 -298 1 982 7885 58 3 0 chr15 52087610 52088601 -51406373 + L1Md_F2 LINE L1 5587 6580 -2 1 982 584 111 0 10 chr15 52089083 52089183 -51405791 + (GAAAA)n Simple_repeat Simple_repeat 3 101 0 1 982 826 304 153 17 chr15 52089534 52090226 -51404748 + L1M2 LINE L1 4274 5042 -1101 1 982 210 71 0 0 chr15 52090226 52090254 -51404720 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1 982 826 304 153 17 chr15 52090254 52090403 -51404571 + L1M2 LINE L1 5043 5229 -914 1 982 225 156 22 0 chr15 52090404 52090449 -51404525 + MTE2b LTR MaLR 289 334 -45 1 982 210 184 0 39 chr15 52090608 52090659 -51404315 + (CCCA)n Simple_repeat Simple_repeat 3 51 0 1 982 5280 197 25 8 chr15 52091756 52093373 -51401601 + Lx7 LINE L1 5190 6796 -900 1 982 1250 216 10 125 chr15 52093370 52093873 -51401101 + Lx7 LINE L1 7252 7696 0 1 982 481 264 119 19 chr15 52093890 52094060 -51400914 + MTC-int LTR MaLR 312 463 -795 1 982 1176 253 72 40 chr15 52094338 52094642 -51400332 + MTD LTR MaLR 67 380 -39 1 982 276 262 58 0 chr15 52094843 52094946 -51400028 + L1MB1 LINE L1 6024 6132 -36 1 982 843 146 22 0 chr15 52094948 52095085 -51399889 + B2_Mm2 SINE B2 1 140 -55 1 982 5599 78 0 4 chr15 52095088 52095881 -51399093 + L1_Mm LINE L1 4109 4898 -985 1 982 357 379 73 20 chr15 52096225 52096470 -51398504 - MIR SINE MIR 0 262 5 1 982 22 0 0 0 chr15 52097378 52097400 -51397574 + AT_rich Low_complexity Low_complexity 1 22 0 1 982 8813 14 1 0 chr15 52097410 52099158 -51395816 - L1Md_A LINE L1 -1 6581 4833 1 982 2591 49 38 0 chr15 52099148 52099518 -51395456 - L1Md_A LINE L1 -6126 598 215 1 982 435 68 0 0 chr15 52099820 52099879 -51395095 + (TCC)n Simple_repeat Simple_repeat 3 61 0 1 982 333 353 0 0 chr15 52099945 52100061 -51394913 - PB1D10 SINE Alu -1 116 1 1 982 493 176 0 18 chr15 52100074 52100184 -51394790 + CT-rich Low_complexity Low_complexity 4 111 0 1 982 475 273 20 54 chr15 52100303 52100450 -51394524 - ID_B1 SINE B4 -6 218 77 1 982 186 118 0 0 chr15 52100802 52100836 -51394138 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 1 982 3020 160 60 11 chr15 52100853 52101404 -51393570 - Lx LINE L1 -6 6648 6071 1 982 202 29 28 28 chr15 52101424 52101460 -51393514 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 1 982 7125 90 27 1 chr15 52101866 52102947 -51392027 + Lx LINE L1 5539 6649 -5 1 982 30761 78 8 3 chr15 52102960 52108385 -51386589 + L1Md_F2 LINE L1 124 5571 -312 1 982 8090 41 1 5 chr15 52108385 52109375 -51385599 + L1Md_F2 LINE L1 5597 6582 0 1 982 1019 166 19 19 chr15 52109403 52109618 -51385356 + Lx2B LINE L1 6783 6997 -3 1 982 414 0 0 0 chr15 52109754 52109800 -51385174 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 982 3089 184 96 12 chr15 52111521 52112170 -51382804 + Lx5 LINE L1 6348 7050 0 1 982 284 286 13 0 chr15 52112230 52112307 -51382667 + BC1_Mm scRNA scRNA 10 87 -65 1 982 23 78 0 0 chr15 52113787 52113838 -51381136 + AT_rich Low_complexity Low_complexity 1 51 0 1 982 560 214 26 0 chr15 52113970 52114087 -51380887 + PB1D9 SINE Alu 1 120 0 1 982 216 0 0 0 chr15 52114686 52114710 -51380264 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 982 1027 77 0 0 chr15 52114710 52114840 -51380134 - B1_Mus1 SINE Alu -11 137 8 1 982 1231 202 43 29 chr15 52114952 52115232 -51379742 + Lx5 LINE L1 6767 7050 0 1 982 263 243 129 0 chr15 52115312 52115382 -51379592 + ID4 SINE ID 2 80 -3 1 982 236 308 24 60 chr15 52115443 52115526 -51379448 + PB1D10 SINE Alu 16 95 -22 1 982 534 94 93 12 chr15 52115544 52115630 -51379344 + RLTR23 LTR ERV1 1 93 -337 1 982 235 98 19 38 chr15 52115634 52115687 -51379287 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 1 982 512 83 129 12 chr15 52115723 52115808 -51379166 + RLTR23 LTR ERV1 104 198 -232 1 982 6301 43 0 0 chr15 52115824 52116572 -51378402 - L1Md_F2 LINE L1 -14 6568 5821 1 982 19213 66 58 5 chr15 52116572 52119323 -51375651 + L1Md_F2 LINE L1 2911 5808 -75 1 982 1465 144 50 70 chr15 52119323 52119621 -51375353 + RLTR23 LTR ERV1 139 430 0 1 982 5141 42 0 0 chr15 52120080 52120692 -51374282 + L1Md_F2 LINE L1 5957 6568 -14 1 982 512 83 129 12 chr15 52120708 52120793 -51374181 - RLTR23 LTR ERV1 -232 198 104 1 982 235 98 19 38 chr15 52120828 52120881 -51374093 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 1 982 404 110 0 0 chr15 52120887 52120960 -51374014 + L1Md_F2 LINE L1 6510 6582 0 1 982 1338 227 158 7 chr15 52121267 52121832 -51373142 + Lx4B LINE L1 6364 7000 0 1 982 183 377 35 0 chr15 52122138 52122252 -51372722 + MIR SINE MIR 131 248 -14 1 982 27 0 0 0 chr15 52123457 52123484 -51371490 + AT_rich Low_complexity Low_complexity 1 27 0 1 982 531 384 13 0 chr15 52123606 52123757 -51371217 + RSINE1 SINE B4 2 154 -11 1 982 3729 10 0 0 chr15 52123854 52124271 -51370703 + L1Md_A LINE L1 6166 6582 0 1 982 417 272 43 9 chr15 52124909 52125024 -51369950 - B4A SINE B4 -90 202 84 1 982 21 0 0 0 chr15 52125287 52125308 -51369666 + AT_rich Low_complexity Low_complexity 1 21 0 2 982 390 91 0 0 chr15 52127116 52127171 -51367803 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 982 380 131 16 50 chr15 52129979 52130100 -51364874 + (TCTCTG)n Simple_repeat Simple_repeat 2 118 0 2 982 709 299 12 6 chr15 52130148 52130316 -51364658 - B4 SINE B4 -89 203 35 2 982 230 148 82 47 chr15 52130343 52130428 -51364546 + L1M4b LINE L1 108 195 -7139 2 982 303 28 0 0 chr15 52130576 52130612 -51364362 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 982 355 340 114 76 chr15 52130680 52131023 -51363951 + MLT1B LTR MaLR 17 388 -2 2 982 574 300 69 75 chr15 52131029 52131721 -51363253 + L1M4b LINE L1 984 1671 -5663 2 982 213 219 41 25 chr15 52131832 52131954 -51363020 + (TAA)n Simple_repeat Simple_repeat 1 124 0 2 982 340 318 145 12 chr15 52131956 52132128 -51362846 + L1M4b LINE L1 1820 2121 -4981 2 982 675 241 14 7 chr15 52132145 52132287 -51362687 + B1_Mur2 SINE Alu 1 143 -6 2 982 325 256 50 164 chr15 52132292 52132451 -51362523 - B3A SINE B2 -56 142 2 2 982 814 305 78 79 chr15 52132467 52132879 -51362095 + L1M4b LINE L1 4875 5272 -1734 2 982 950 242 9 14 chr15 52132879 52133093 -51361881 + B3 SINE B2 1 213 -3 2 982 814 305 78 79 chr15 52133093 52133336 -51361638 + L1M4b LINE L1 5273 5529 -1477 2 982 1618 190 99 3 chr15 52133337 52133670 -51361304 - ORR1B2 LTR MaLR -2 365 1 2 982 6405 178 85 18 chr15 52133692 52135058 -51359916 - ORR1B2-int LTR MaLR -51 1458 1 2 982 286 224 0 0 chr15 52135095 52135153 -51359821 - Lx8 LINE L1 -820 6653 6596 2 982 1888 131 0 106 chr15 52135215 52135583 -51359391 + ORR1A4 LTR MaLR 1 329 0 2 982 183 67 21 62 chr15 52135744 52135792 -51359182 + (CATATA)n Simple_repeat Simple_repeat 1 46 0 2 982 467 314 30 48 chr15 52135824 52136055 -51358919 + L1M4b LINE L1 5758 5984 -1022 2 982 336 303 81 80 chr15 52136292 52136583 -51358391 - ORR1E LTR MaLR -2 377 51 2 982 224 352 73 18 chr15 52137348 52137458 -51357516 + MIR3 SINE MIR 42 157 -51 2 982 350 335 45 59 chr15 52138559 52138781 -51356193 - L1M2 LINE L1 -339 5785 5567 2 982 300 286 15 131 chr15 52138834 52138971 -51356003 + B3 SINE B2 90 210 -6 2 982 6847 71 10 6 chr15 52139106 52140657 -51354317 - L1Md_F2 LINE L1 -1 6581 5022 2 982 1037 111 0 7 chr15 52140877 52141022 -51353952 - B1_Mus2 SINE Alu -2 145 2 2 982 325 298 61 34 chr15 52142473 52142678 -51352296 - L1M2 LINE L1 -1921 4225 4012 2 982 32 43 0 0 chr15 52143572 52143618 -51351356 + AT_rich Low_complexity Low_complexity 1 46 0 2 982 240 338 79 50 chr15 52143989 52144129 -51350845 + MLT1K LTR MaLR 443 586 -9 2 982 21 36 0 0 chr15 52144751 52144779 -51350195 + AT_rich Low_complexity Low_complexity 1 28 0 2 982 1829 218 30 19 chr15 52145075 52145293 -51349681 - ORR1D1 LTR MaLR -1 373 155 2 982 3766 150 71 9 chr15 52145293 52145945 -51349029 - RLTR17 LTR ERVK 0 692 1 2 982 1829 218 30 19 chr15 52145945 52146095 -51348879 - ORR1D1 LTR MaLR -220 154 1 2 982 351 0 0 0 chr15 52146665 52146704 -51348270 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 982 447 19 0 0 chr15 52146704 52146755 -51348219 + (GA)n Simple_repeat Simple_repeat 2 53 0 2 982 226 204 0 0 chr15 52146758 52146802 -51348172 - L1M2 LINE L1 -364 5936 5893 2 982 230 318 21 74 chr15 52147210 52147305 -51347669 + L2c LINE L2 3298 3387 0 2 982 400 241 3 73 chr15 52149585 52149729 -51345245 + MLT1A1 LTR MaLR 243 406 -2 2 982 356 280 188 12 chr15 52150602 52150772 -51344202 + MER3 DNA MER1_type 7 206 -3 2 982 687 333 56 18 chr15 52151179 52151625 -51343349 - MLT1C LTR MaLR -3 464 2 2 982 293 314 163 10 chr15 52151831 52152027 -51342947 + MER113A DNA MER1_type 86 311 -3 2 982 1084 238 114 62 chr15 52152101 52152487 -51342487 + MTD LTR MaLR 2 407 -12 2 982 433 233 168 40 chr15 52154055 52154213 -51340761 + MLT1C LTR MaLR 295 497 -8 2 982 330 26 0 0 chr15 52154374 52154413 -51340561 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 982 3393 38 0 0 chr15 52155084 52155479 -51339495 - MTA_Mm LTR MaLR -1 395 1 2 982 186 43 0 0 chr15 52155922 52155945 -51339029 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 982 762 124 14 0 chr15 52156490 52156635 -51338339 + Lx3_Mus LINE L1 6863 7009 0 2 982 503 251 131 42 chr15 52157752 52157943 -51337031 - B3A SINE B2 -5 211 4 2 982 655 38 0 0 chr15 52158059 52158138 -51336836 + RLTR10B2 LTR ERVK 1 79 -286 2 982 9968 49 0 0 chr15 52158138 52159395 -51335579 - MMERVK10C-int LTR ERVK -3662 3919 2663 2 982 451 33 0 16 chr15 52159395 52159457 -51335517 + RLTR10B2 LTR ERVK 305 365 0 2 982 1644 216 39 68 chr15 52159884 52160400 -51334574 + Lx7 LINE L1 7003 7503 -193 2 982 430 279 15 0 chr15 52160524 52160660 -51334314 + Lx7 LINE L1 7559 7696 0 2 982 549 235 91 58 chr15 52160661 52160869 -51334105 + RMER5 LTR ERV1 188 402 -132 2 982 922 108 6 19 chr15 52161030 52161190 -51333784 + (GGGAGA)n Simple_repeat Simple_repeat 5 162 0 2 982 8704 16 0 0 chr15 52161383 52162426 -51332548 - L1_Mm LINE L1 -321 5562 4520 2 982 3467 66 0 0 chr15 52162426 52162867 -51332107 + L1Md_T LINE L1 6141 6581 -1 2 982 303 28 0 0 chr15 52163397 52163433 -51331541 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 982 523 288 36 0 chr15 52164207 52164346 -51330628 + B1F1 SINE Alu 4 147 -2 2 982 444 37 0 0 chr15 52166509 52166563 -51328411 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 982 349 35 34 34 chr15 52166564 52166623 -51328351 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 2 983 375 23 0 0 chr15 52168267 52168311 -51326663 + (CAA)n Simple_repeat Simple_repeat 2 45 0 2 983 1967 260 34 42 chr15 52168369 52169090 -51325884 + Lx5 LINE L1 6454 7031 -19 2 983 432 130 0 0 chr15 52169091 52169160 -51325814 + (TAA)n Simple_repeat Simple_repeat 1 69 0 2 983 576 0 0 0 chr15 52169370 52169434 -51325540 + (TCTCCC)n Simple_repeat Simple_repeat 1 64 0 2 983 262 293 110 31 chr15 52169785 52169912 -51325062 + MIRb SINE MIR 18 154 -114 2 983 486 0 0 0 chr15 52170589 52170643 -51324331 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 983 200 204 0 58 chr15 52171288 52171321 -51323653 + T-rich Low_complexity Low_complexity 21 53 0 2 983 1070 116 0 0 chr15 52171321 52171467 -51323507 - B1_Mus1 SINE Alu -2 146 1 2 983 200 204 0 58 chr15 52171467 52171485 -51323489 + T-rich Low_complexity Low_complexity 5 20 0 2 983 1384 238 156 47 chr15 52171859 52171911 -51323063 - RLTR20B3 LTR ERVK -39 538 474 2 983 812 10 10 0 chr15 52171911 52172008 -51322966 + (CA)n Simple_repeat Simple_repeat 2 99 0 2 983 1384 238 156 47 chr15 52172008 52172422 -51322552 - RLTR20B3 LTR ERVK -104 473 21 2 983 189 361 36 0 chr15 52172492 52172602 -51322372 - L2b LINE L2 -1 3374 3285 2 983 1505 132 4 19 chr15 52173581 52173837 -51321137 - L1_Mus4 LINE L1 -6 6630 6379 2 983 364 348 2 16 chr15 52174418 52174557 -51320417 + MIR SINE MIR 10 149 -119 2 983 378 0 0 0 chr15 52174673 52174715 -51320259 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 983 365 123 0 15 chr15 52175155 52175221 -51319753 + (TG)n Simple_repeat Simple_repeat 1 65 0 2 983 864 276 76 19 chr15 52175262 52175524 -51319450 - B4A SINE B4 -8 284 8 2 983 591 27 0 0 chr15 52177886 52177959 -51317015 + (TG)n Simple_repeat Simple_repeat 1 73 0 2 983 299 351 177 61 chr15 52178544 52179153 -51315821 + LTR50 LTR ERVL 1 680 -115 2 983 26 0 0 0 chr15 52179164 52179190 -51315784 + AT_rich Low_complexity Low_complexity 1 26 0 2 983 307 338 40 20 chr15 52179243 52179391 -51315583 + MIRb SINE MIR 103 253 -15 2 983 23 0 0 0 chr15 52179860 52179883 -51315091 + GC_rich Low_complexity Low_complexity 1 23 0 2 983 613 259 87 37 chr15 52180797 52181096 -51313878 + ORR1D2 LTR MaLR 1 368 -2 2 983 233 292 106 102 chr15 52181173 52181409 -51313565 - L2c LINE L2 -188 3199 2963 2 983 23 0 0 0 chr15 52181581 52181604 -51313370 + AT_rich Low_complexity Low_complexity 1 23 0 2 983 2311 174 59 17 chr15 52182058 52182531 -51312443 - RMER5 LTR ERV1 -26 508 16 2 983 9447 14 2 0 chr15 52182592 52183727 -51311247 + L1Md_A LINE L1 4450 5586 -297 2 983 9013 5 0 0 chr15 52183727 52184723 -51310251 + L1Md_A LINE L1 5587 6582 0 2 983 321 26 0 0 chr15 52184742 52184780 -51310194 + (A)n Simple_repeat Simple_repeat 1 38 0 2 983 8465 31 1 0 chr15 52184797 52185792 -51309182 + L1Md_T LINE L1 5587 6582 0 2 983 369 0 0 0 chr15 52186075 52186116 -51308858 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 2 983 881 300 14 11 chr15 52186116 52186399 -51308575 - Lx6 LINE L1 -32 7428 7145 2 983 198 255 20 0 chr15 52186948 52186999 -51307975 + MIRc SINE MIR 181 232 -36 2 983 313 191 9 9 chr15 52188569 52188675 -51306299 + (TA)n Simple_repeat Simple_repeat 1 106 0 2 983 467 303 40 5 chr15 52189580 52189802 -51305172 + L1M4 LINE L1 3894 4123 -2023 2 983 602 233 48 0 chr15 52189814 52190003 -51304971 + L1M4 LINE L1 5206 5403 -743 2 983 1811 235 47 10 chr15 52190008 52190412 -51304562 - MTD LTR MaLR 0 419 1 2 983 599 286 67 50 chr15 52190412 52190743 -51304231 + L1M4 LINE L1 5408 5736 -428 2 983 1973 105 204 0 chr15 52190778 52191150 -51303824 - RLTR47_MM LTR ERV1 -84 448 1 2 983 253 331 8 0 chr15 52191233 52191366 -51303608 - MuRRS4-int LTR ERV1 -51 7727 7594 2 983 440 317 45 55 chr15 52192039 52192494 -51302480 - MuRRS4-int LTR ERV1 -1045 4018 3876 2 983 587 321 52 50 chr15 52192919 52193378 -51301596 - MuLV-int LTR ERV1 -3156 4450 3991 2 983 1348 324 65 24 chr15 52193455 52194739 -51300235 - MuRRS4-int LTR ERV1 -5129 2427 1050 2 983 349 276 30 30 chr15 52195132 52195263 -51299711 - MuRRS4-int LTR ERV1 -6900 656 526 2 983 681 154 130 37 chr15 52195741 52195903 -51299071 - RLTR47_MM LTR ERV1 -2 530 354 2 983 521 308 74 12 chr15 52195943 52196186 -51298788 - Lx8 LINE L1 -16 7457 7200 2 983 1776 187 30 44 chr15 52196241 52196558 -51298416 + ORR1B2 LTR MaLR 1 313 -54 2 983 547 80 20 0 chr15 52196558 52196658 -51298316 + L1Md_F2 LINE L1 6480 6581 -1 2 983 1776 187 30 44 chr15 52196658 52196703 -51298271 + ORR1B2 LTR MaLR 314 358 -9 2 983 387 281 30 6 chr15 52196973 52197138 -51297836 + L1MB8 LINE L1 5795 5963 -215 2 983 25 0 0 0 chr15 52197229 52197254 -51297720 + AT_rich Low_complexity Low_complexity 1 25 0 2 983 456 19 0 0 chr15 52197507 52197560 -51297414 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 983 182 344 90 22 chr15 52198291 52198425 -51296549 + MIR SINE MIR 33 175 -87 2 983 204 97 0 0 chr15 52198907 52198938 -51296036 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 2 983 24 32 0 0 chr15 52201085 52201116 -51293858 + AT_rich Low_complexity Low_complexity 1 31 0 3 983 664 136 16 0 chr15 52201193 52201318 -51293656 + (TA)n Simple_repeat Simple_repeat 2 128 0 3 983 190 271 102 0 chr15 52201423 52201482 -51293492 + L2 LINE L2 1233 1297 -2122 3 983 250 376 85 28 chr15 52202079 52202290 -51292684 - MLT1J LTR MaLR -3 509 287 3 983 234 289 19 0 chr15 52202592 52202644 -51292330 + ID4_ SINE ID 2 54 -29 3 983 624 200 0 0 chr15 52203909 52204039 -51290935 + (TA)n Simple_repeat Simple_repeat 2 131 0 3 983 936 126 214 0 chr15 52204415 52204597 -51290377 + URR1A DNA MER1_type 5 225 -1 3 983 308 361 113 39 chr15 52204625 52205271 -51289703 - L2 LINE L2 -366 3053 2360 3 983 489 62 0 0 chr15 52205651 52205716 -51289258 + (TC)n Simple_repeat Simple_repeat 1 65 0 3 983 833 237 29 43 chr15 52205833 52206040 -51288934 - B3 SINE B2 -11 205 2 3 983 571 275 30 0 chr15 52206370 52206501 -51288473 + RSINE1 SINE B4 15 149 -16 3 983 261 324 57 38 chr15 52206917 52207023 -51287951 - MER5A DNA MER1_type -81 108 1 3 983 1271 265 128 31 chr15 52207995 52208506 -51286468 + Lx8 LINE L1 6096 6655 -818 3 983 1081 285 30 19 chr15 52208602 52208967 -51286007 + Lx8 LINE L1 6961 7329 -144 3 983 250 228 38 136 chr15 52208855 52208987 -51285987 + RMER1C Other Other 1103 1221 -121 3 983 358 355 7 7 chr15 52210050 52210192 -51284782 + MIR SINE MIR 8 149 -113 3 983 240 281 16 66 chr15 52211155 52211277 -51283697 - L2a LINE L2 -112 3314 3199 3 983 2414 53 3 0 chr15 52211585 52211889 -51283085 - L1_Mus1 LINE L1 0 6567 6263 3 983 878 105 15 0 chr15 52211889 52212022 -51282952 + L1_Mus1 LINE L1 6134 6268 -299 3 983 467 328 35 74 chr15 52212115 52212372 -51282602 - ORR1E LTR MaLR -5 354 108 3 983 21 0 0 0 chr15 52212380 52212401 -51282573 + AT_rich Low_complexity Low_complexity 1 21 0 3 983 5322 36 5 0 chr15 52212558 52213195 -51281779 - L1Md_F3 LINE L1 -16 6568 5929 3 983 811 210 52 21 chr15 52213241 52213521 -51281453 + Lx4B LINE L1 6691 7055 -3 3 983 29 47 0 0 chr15 52213521 52213564 -51281410 + AT_rich Low_complexity Low_complexity 1 43 0 3 983 23 54 0 0 chr15 52213754 52213791 -51281183 + AT_rich Low_complexity Low_complexity 1 37 0 3 983 259 310 14 14 chr15 52213808 52213880 -51281094 - ORR1E LTR MaLR -282 77 6 3 983 294 50 0 0 chr15 52214435 52214475 -51280499 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 983 1096 60 0 0 chr15 52216403 52216553 -51278421 + L1Md_A LINE L1 6388 6537 -45 3 983 910 299 9 5 chr15 52216615 52216827 -51278147 + B4 SINE B4 2 214 -78 3 983 239 279 0 0 chr15 52217907 52217968 -51277006 + MER58D DNA MER1_type 284 344 -42 3 983 309 401 66 6 chr15 52218341 52218524 -51276450 + MER58A DNA MER1_type 20 213 -11 3 983 888 298 98 8 chr15 52218633 52218967 -51276007 + Lx5 LINE L1 6535 6854 -196 3 983 347 145 14 0 chr15 52218967 52219036 -51275938 + (TA)n Simple_repeat Simple_repeat 2 71 0 3 983 614 224 123 79 chr15 52219036 52219288 -51275686 - Lx7 LINE L1 -1643 6053 5791 3 983 272 135 26 26 chr15 52219371 52219447 -51275527 + (TA)n Simple_repeat Simple_repeat 1 76 0 3 983 1986 160 67 5 chr15 52219451 52219822 -51275152 + ORR1B1 LTR MaLR 1 394 0 3 983 253 276 20 30 chr15 52219829 52219930 -51275044 + (CATATA)n Simple_repeat Simple_repeat 6 105 0 3 983 259 295 89 18 chr15 52220082 52220251 -51274723 + L1MD LINE L1 2396 2576 -3570 3 983 180 0 0 0 chr15 52221901 52221921 -51273053 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 983 938 259 18 18 chr15 52222567 52222839 -51272135 - Lx9 LINE L1 -214 7430 7159 3 983 982 276 101 11 chr15 52223827 52224284 -51270690 - Lx8 LINE L1 -6 7467 6970 3 983 24 77 0 0 chr15 52224331 52224383 -51270591 + AT_rich Low_complexity Low_complexity 1 52 0 3 983 957 280 9 5 chr15 52224421 52224633 -51270341 + MTEb LTR MaLR 2 214 -165 3 983 2378 230 95 66 chr15 52224690 52225417 -51269557 + RMER13A LTR ERVK 1 748 -112 3 983 241 311 48 48 chr15 52225607 52225732 -51269242 + RMER21B LTR ERV1 84 208 -634 3 983 753 250 98 20 chr15 52225762 52225966 -51269008 + RMER21B LTR ERV1 348 567 -275 3 983 259 280 0 85 chr15 52225973 52226055 -51268919 + RMER21B LTR ERV1 761 835 -112 3 983 580 344 133 18 chr15 52226066 52226569 -51268405 + L2 LINE L2 2435 2995 -424 3 983 576 0 0 0 chr15 52228017 52228081 -51266893 + (GA)n Simple_repeat Simple_repeat 1 64 0 3 983 522 0 0 0 chr15 52231411 52231469 -51263505 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 983 1955 69 0 8 chr15 52232627 52232889 -51262085 + L1_Mus1 LINE L1 6297 6556 -11 3 983 1011 126 0 0 chr15 52232896 52233055 -51261919 + (GAA)n Simple_repeat Simple_repeat 2 160 0 3 983 315 340 101 48 chr15 52233574 52233887 -51261087 + MLT1F LTR MaLR 16 343 -236 3 983 319 347 39 42 chr15 52234994 52235277 -51259697 + B4A SINE B4 5 286 -6 3 983 276 30 0 0 chr15 52235316 52235349 -51259625 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 983 213 196 0 38 chr15 52238929 52238982 -51255992 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 3 983 995 326 6 28 chr15 52240685 52241007 -51253967 - MTE2b LTR MaLR 0 379 65 3 983 7694 29 8 4 chr15 52241011 52241928 -51253046 + L1Md_F3 LINE L1 5651 6570 -14 3 983 253 295 0 0 chr15 52241957 52242018 -51252956 - MTE2b LTR MaLR -316 63 3 3 983 396 0 0 0 chr15 52242507 52242551 -51252423 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 983 279 157 0 0 chr15 52242748 52242799 -51252175 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 983 453 19 0 0 chr15 52243923 52243977 -51250997 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 983 220 120 40 0 chr15 52243981 52244031 -51250943 + GA-rich Low_complexity Low_complexity 2 53 0 3 983 343 288 71 57 chr15 52244186 52244326 -51250648 - MER20 DNA MER1_type -62 157 16 3 983 218 259 51 17 chr15 52245538 52245597 -51249377 + ID4_ SINE ID 9 69 -14 3 983 477 0 0 0 chr15 52245597 52245650 -51249324 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 983 26 0 0 0 chr15 52245708 52245734 -51249240 + AT_rich Low_complexity Low_complexity 1 26 0 3 983 1214 254 68 30 chr15 52248869 52249206 -51245768 - ORR1E LTR MaLR -4 355 6 3 983 248 304 67 18 chr15 52249593 52249757 -51245217 - HAL1 LINE L1 -805 1702 1531 3 983 448 238 58 1 chr15 52249922 52250028 -51244946 - MTD LTR MaLR -14 405 290 3 983 2131 164 44 13 chr15 52250375 52250456 -51244518 - RLTR20C LTR ERVK -5 529 446 3 983 435 19 0 0 chr15 52250456 52250508 -51244466 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 983 2131 164 44 13 chr15 52250508 52250810 -51244164 - RLTR20C LTR ERVK -89 445 136 3 983 1179 191 14 68 chr15 52251468 52251749 -51243225 + Lx5 LINE L1 6774 7039 -11 3 983 274 293 61 0 chr15 52252071 52252153 -51242821 + MER99 DNA hAT? 2 88 -743 3 983 313 292 21 0 chr15 52252402 52252498 -51242476 - MER99 DNA hAT? -387 444 347 3 983 21 36 0 0 chr15 52252642 52252670 -51242304 + AT_rich Low_complexity Low_complexity 1 28 0 3 983 234 328 107 15 chr15 52252670 52252803 -51242171 - B3A SINE B2 -4 212 70 3 983 184 339 68 43 chr15 52253153 52253270 -51241704 + L2b LINE L2 3048 3167 -220 3 983 666 274 23 128 chr15 52253438 52253743 -51241231 - B4 SINE B4 -18 274 2 3 983 211 328 127 22 chr15 52253849 52253983 -51240991 + L2b LINE L2 3210 3368 -19 3 983 943 296 53 109 chr15 52254302 52254488 -51240486 + ORR1E LTR MaLR 5 174 -185 3 983 720 0 0 0 chr15 52254488 52254568 -51240406 + (TC)n Simple_repeat Simple_repeat 2 81 0 3 983 943 296 53 109 chr15 52254568 52254757 -51240217 + ORR1E LTR MaLR 175 358 -1 3 983 189 188 19 77 chr15 52255615 52255667 -51239307 + L2a LINE L2 3374 3422 -4 3 983 2046 89 7 10 chr15 52255756 52256050 -51238924 - L1_Mus2 LINE L1 0 6566 6274 3 983 246 30 0 0 chr15 52256051 52256084 -51238890 + L1_Mus2 LINE L1 6258 6290 -348 3 983 1595 241 44 35 chr15 52256086 52256521 -51238453 - RLTR20A2 LTR ERVK -139 439 1 3 983 216 0 0 0 chr15 52256985 52257009 -51237965 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 983 219 204 0 0 chr15 52257978 52258027 -51236947 + T-rich Low_complexity Low_complexity 2 50 0 3 983 754 194 7 27 chr15 52259316 52259464 -51235510 + B1_Mus1 SINE Alu 1 145 -3 3 983 278 80 20 0 chr15 52259464 52259514 -51235460 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 983 282 288 97 58 chr15 52259564 52259719 -51235255 + B3A SINE B2 38 198 0 3 983 335 200 87 39 chr15 52261143 52261247 -51233727 + B1F SINE Alu 41 149 0 3 983 264 366 12 0 chr15 52261247 52261329 -51233645 + ID4_ SINE ID 1 83 0 3 983 397 296 160 19 chr15 52261439 52261752 -51233222 + L1M2 LINE L1 5330 5686 -614 3 983 536 293 58 11 chr15 52263187 52263377 -51231597 - B4A SINE B4 -86 206 8 3 983 23 0 0 0 chr15 52264130 52264153 -51230821 + AT_rich Low_complexity Low_complexity 1 23 0 3 983 485 274 72 98 chr15 52265862 52266251 -51228723 - MTEa LTR MaLR 0 379 1 3 983 460 354 129 34 chr15 52266524 52267281 -51227693 - L2 LINE L2 -1626 1793 965 3 983 992 297 15 19 chr15 52267600 52267871 -51227103 - B4 SINE B4 -20 272 3 3 983 576 242 130 52 chr15 52267889 52268081 -51226893 - B3 SINE B2 -6 210 4 3 983 281 133 16 62 chr15 52268377 52268441 -51226533 - MIR SINE MIR -125 137 77 3 983 276 150 17 0 chr15 52268683 52268743 -51226231 - MTC LTR MaLR -1 420 375 3 983 291 273 62 26 chr15 52268745 52268858 -51226116 + B1F SINE Alu 33 149 0 3 983 259 378 12 0 chr15 52268864 52268946 -51226028 + ID4_ SINE ID 1 83 0 3 983 1502 207 132 3 chr15 52269063 52269388 -51225586 - MTC LTR MaLR -54 367 1 3 983 303 206 101 14 chr15 52269435 52269583 -51225391 - RMER17C LTR ERVK -133 277 117 3 983 459 0 0 0 chr15 52269584 52269635 -51225339 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 983 392 295 50 61 chr15 52269812 52269991 -51224983 + B3A SINE B2 3 184 -32 3 983 279 0 0 0 chr15 52269991 52270022 -51224952 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 983 337 284 55 71 chr15 52270022 52270058 -51224916 + B3 SINE B2 185 215 -1 3 983 523 207 59 0 chr15 52270345 52270514 -51224460 + Lx9 LINE L1 7460 7638 -6 4 983 2424 187 139 22 chr15 52270787 52271334 -51223640 + RMER19C LTR ERVK 1 611 0 4 983 222 300 100 0 chr15 52273030 52273110 -51221864 + MIR SINE MIR 10 97 -165 4 983 340 379 49 56 chr15 52274011 52274103 -51220871 - MLT1C LTR MaLR -75 392 299 4 983 378 0 0 0 chr15 52274103 52274145 -51220829 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 983 340 379 49 56 chr15 52274145 52274337 -51220637 - MLT1C LTR MaLR -169 298 110 4 983 704 263 93 21 chr15 52274355 52274517 -51220457 + B3 SINE B2 7 167 -49 4 983 243 0 0 0 chr15 52274517 52274544 -51220430 + (CATA)n Simple_repeat Simple_repeat 4 30 0 4 983 704 263 93 21 chr15 52274544 52274575 -51220399 + B3 SINE B2 168 213 -3 4 983 362 261 84 35 chr15 52274881 52275028 -51219946 + B3 SINE B2 40 211 -5 4 983 978 233 194 6 chr15 52275216 52275531 -51219443 + ORR1D1 LTR MaLR 1 374 0 4 983 221 246 0 17 chr15 52275748 52275806 -51219168 + CT-rich Low_complexity Low_complexity 1 57 0 4 983 271 353 51 127 chr15 52275963 52276255 -51218719 + MLT1J LTR MaLR 214 483 -29 4 983 221 328 0 109 chr15 52277404 52277541 -51217433 + L2c LINE L2 3266 3387 0 4 983 1790 220 18 8 chr15 52277824 52278135 -51216839 + Lx5 LINE L1 6644 6958 -92 4 983 3054 141 23 49 chr15 52278135 52278703 -51216271 - RLTR31_Mur LTR ERVK 0 553 1 4 983 1790 220 18 8 chr15 52278703 52278780 -51216194 + Lx5 LINE L1 6959 7036 -14 4 983 606 28 0 0 chr15 52278780 52278852 -51216122 + (GA)n Simple_repeat Simple_repeat 1 72 0 4 983 421 266 54 151 chr15 52279020 52279206 -51215768 + B4A SINE B4 5 172 -120 4 983 282 56 0 0 chr15 52279296 52279332 -51215642 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 983 962 226 9 31 chr15 52279956 52280184 -51214790 - URR1B DNA MER1_type -1 224 2 4 983 409 321 121 4 chr15 52280688 52280960 -51214014 + L1MC3 LINE L1 7463 7766 -19 4 983 570 317 32 110 chr15 52281144 52281544 -51213430 + RMER20B LTR ERVK 234 602 -25 4 983 275 333 30 15 chr15 52283881 52284012 -51210962 - MIR3 SINE MIR -1 207 75 4 983 914 306 77 31 chr15 52284275 52284599 -51210375 - MTE2a LTR MaLR 0 379 41 4 983 587 320 49 5 chr15 52284678 52284882 -51210092 - MTE-int LTR MaLR 0 1580 1368 4 983 1568 310 69 22 chr15 52284880 52285430 -51209544 - MTE-int LTR MaLR -973 607 32 4 983 303 264 213 8 chr15 52285883 52286005 -51208969 + MLT1D LTR MaLR 63 209 -296 4 983 326 324 29 0 chr15 52286041 52286146 -51208828 + MLT1D LTR MaLR 268 375 -130 4 983 407 280 162 18 chr15 52286837 52287004 -51207970 + MLT1D LTR MaLR 57 247 -258 4 983 306 181 0 37 chr15 52287524 52287606 -51207368 + L1MA5 LINE L1 6148 6223 -77 4 983 892 109 0 20 chr15 52288685 52288835 -51206139 + (TCTCCC)n Simple_repeat Simple_repeat 3 149 0 4 983 180 0 0 0 chr15 52289403 52289423 -51205551 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 983 245 340 10 40 chr15 52290047 52290148 -51204826 + L2c LINE L2 3290 3387 0 4 983 252 0 0 0 chr15 52290872 52290900 -51204074 + (TC)n Simple_repeat Simple_repeat 1 28 0 4 983 590 85 11 0 chr15 52291833 52291927 -51203047 + (CA)n Simple_repeat Simple_repeat 1 95 0 4 983 1938 128 10 113 chr15 52292086 52292483 -51202491 + ORR1B1 LTR MaLR 39 394 0 4 983 550 97 29 0 chr15 52292523 52292626 -51202348 + (TCTA)n Simple_repeat Simple_repeat 4 109 0 4 983 321 192 12 99 chr15 52292678 52292759 -51202215 + RSINE1 SINE B4 9 82 -83 4 983 34 24 0 0 chr15 52292793 52292834 -51202140 + AT_rich Low_complexity Low_complexity 1 41 0 4 983 24 32 0 0 chr15 52292881 52292912 -51202062 + AT_rich Low_complexity Low_complexity 1 31 0 4 983 624 312 7 0 chr15 52293075 52293229 -51201745 + B3A SINE B2 17 171 -27 4 983 317 276 0 11 chr15 52293231 52293319 -51201655 + CT-rich Low_complexity Low_complexity 1 87 0 4 983 209 341 90 8 chr15 52293662 52293795 -51201179 + MIR SINE MIR 9 152 -110 4 983 190 311 99 92 chr15 52294376 52294507 -51200467 - MIR SINE MIR -94 168 37 4 983 352 302 113 28 chr15 52296434 52296611 -51198363 - MER117 DNA MER1_type 0 197 6 4 983 200 139 28 0 chr15 52296621 52296657 -51198317 + MIRm SINE MIR 235 271 -5 4 983 306 67 0 0 chr15 52297523 52297568 -51197406 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 984 246 136 0 0 chr15 52298107 52298151 -51196823 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 984 239 262 117 39 chr15 52298666 52298845 -51196129 + RMER17D LTR ERVK 216 408 -481 4 984 1427 217 138 35 chr15 52299167 52299544 -51195430 + MTD LTR MaLR 1 416 -3 4 984 2811 54 5 111 chr15 52300675 52301109 -51193865 - RLTR10 LTR ERVK -2 388 1 4 984 25 31 0 0 chr15 52301120 52301152 -51193822 + AT_rich Low_complexity Low_complexity 1 32 0 4 984 393 141 0 0 chr15 52301152 52301237 -51193737 + (TC)n Simple_repeat Simple_repeat 2 86 0 4 984 255 61 0 0 chr15 52301239 52301272 -51193702 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 984 460 215 26 0 chr15 52301376 52301471 -51193503 - B3A SINE B2 -93 100 3 4 984 796 290 105 65 chr15 52301487 52301993 -51192981 - Lx8 LINE L1 -6 7467 6942 4 984 9325 54 1 0 chr15 52302012 52303236 -51191738 + L1Md_F2 LINE L1 4363 5587 -296 4 984 7628 45 45 2 chr15 52303237 52304190 -51190784 + L1Md_F2 LINE L1 5589 6582 0 4 984 2271 58 0 0 chr15 52304190 52304483 -51190491 + L1Md_F3 LINE L1 5294 5586 -297 4 984 7705 52 6 17 chr15 52304483 52305492 -51189482 + L1Md_F3 LINE L1 5587 6584 0 4 984 10022 83 10 15 chr15 52305492 52307019 -51187955 + L1_Mur1 LINE L1 1672 3190 -2696 4 984 572 217 35 0 chr15 52307019 52307134 -51187840 + ETnERV2-int LTR ERVK 7078 7196 -210 4 984 2287 87 20 3 chr15 52307519 52307877 -51187097 + L1_Mur1 LINE L1 3176 3539 -2347 4 984 4025 106 13 5 chr15 52307880 52308479 -51186495 - RMER17B LTR ERVK -301 657 54 4 984 1296 92 9 14 chr15 52308482 52308692 -51186282 + Lx3_Mus LINE L1 6801 7009 0 4 984 271 250 14 0 chr15 52308705 52308777 -51186197 + (TA)n Simple_repeat Simple_repeat 2 74 0 4 984 405 0 0 0 chr15 52308978 52309023 -51185951 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 4 984 219 397 0 0 chr15 52309037 52309100 -51185874 - RSINE1 SINE B4 -16 149 87 4 984 180 0 0 0 chr15 52309100 52309120 -51185854 + (T)n Simple_repeat Simple_repeat 1 20 0 4 984 316 368 9 9 chr15 52309901 52310008 -51184966 - B4 SINE B4 -181 111 5 4 984 329 259 117 44 chr15 52310324 52310530 -51184444 - L1_Mur1 LINE L1 -559 5625 5384 4 984 373 286 81 48 chr15 52310583 52310917 -51184057 - L1M3 LINE L1 -870 5273 4929 4 984 750 294 65 8 chr15 52310915 52311314 -51183660 - L1M3 LINE L1 -2151 3989 3547 4 984 1074 265 54 11 chr15 52313119 52313470 -51181504 + ORR1D2 LTR MaLR 1 366 -4 4 984 233 360 68 111 chr15 52314120 52314445 -51180529 - MamGypLTR1c LTR Gypsy -17 786 476 4 984 478 325 65 73 chr15 52315812 52316180 -51178794 + L1MEc LINE L1 39 403 -5997 4 984 400 288 128 18 chr15 52316843 52317062 -51177912 + L1MEc LINE L1 1228 1470 -4930 4 984 270 295 57 29 chr15 52317100 52317310 -51177664 + L1MEc LINE L1 1646 1827 -4573 4 984 22 35 0 0 chr15 52317558 52317587 -51177387 + AT_rich Low_complexity Low_complexity 1 29 0 4 984 2417 196 116 34 chr15 52317677 52318468 -51176506 + Lx7 LINE L1 2561 3416 -2464 4 984 18179 81 15 11 chr15 52318480 52320720 -51174254 + L1VL4 LINE L1 210 2466 -1093 4 984 4499 40 67 2 chr15 52320720 52321271 -51173703 + LTRIS_Mus LTR ERV1 1 587 0 4 984 18179 75 11 10 chr15 52321271 52321940 -51173034 + L1VL4 LINE L1 2467 3132 -427 4 984 1214 48 0 0 chr15 52321940 52322086 -51172888 + B1_Mus1 SINE Alu 2 147 -1 4 984 18179 75 11 10 chr15 52322086 52322511 -51172463 + L1VL4 LINE L1 3133 3556 -3 4 984 9824 177 75 24 chr15 52322516 52323366 -51171608 + Lx7 LINE L1 3403 4356 -1524 4 984 1036 132 33 39 chr15 52323366 52323547 -51171427 - B2_Mm2 SINE B2 -14 181 2 4 984 9824 205 66 38 chr15 52323547 52326624 -51168350 + Lx7 LINE L1 4357 7448 -248 4 984 539 92 11 0 chr15 52326624 52326711 -51168263 + (TG)n Simple_repeat Simple_repeat 2 89 0 4 984 7100 232 58 52 chr15 52326711 52326943 -51168031 + Lx7 LINE L1 7449 7695 -1 4 984 527 284 98 5 chr15 52326940 52327326 -51167648 + L1M4 LINE L1 4182 4603 -1543 4 984 241 26 53 0 chr15 52327481 52327519 -51167455 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 984 221 215 21 21 chr15 52327571 52327666 -51167308 + (TA)n Simple_repeat Simple_repeat 1 95 0 4 984 366 286 124 59 chr15 52328039 52328225 -51166749 + MLT1J1 LTR MaLR 121 318 -126 4 984 596 153 31 0 chr15 52328440 52328538 -51166436 + U6 snRNA snRNA 2 102 -5 4 984 2943 242 77 45 chr15 52328582 52329549 -51165425 + Lx5 LINE L1 6033 7029 -21 4 984 297 0 0 0 chr15 52329549 52329582 -51165392 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 4 984 234 293 39 39 chr15 52329747 52329825 -51165149 - MLT1D LTR MaLR -318 187 110 4 984 260 219 31 0 chr15 52330438 52330502 -51164472 + L1_Mur3 LINE L1 4925 4990 -890 4 984 653 313 142 11 chr15 52330630 52331112 -51163862 + L1M2 LINE L1 5190 5734 -569 4 984 351 0 0 0 chr15 52331127 52331166 -51163808 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 984 3035 217 146 22 chr15 52331789 52332688 -51162286 + RMER1B Other Other 46 1055 -11 4 984 24 67 0 0 chr15 52332688 52332733 -51162241 + AT_rich Low_complexity Low_complexity 1 45 0 4 984 22 0 0 0 chr15 52333044 52333066 -51161908 + AT_rich Low_complexity Low_complexity 1 22 0 4 984 2280 156 71 6 chr15 52333461 52333940 -51161034 + L1_Mur3 LINE L1 3134 3643 -2237 4 984 2298 106 16 0 chr15 52334660 52334982 -51159992 - ORR1A2 LTR MaLR 0 327 1 4 984 758 306 42 79 chr15 52335198 52335890 -51159084 - L1M2 LINE L1 -863 5280 4606 4 984 3818 34 47 0 chr15 52335890 52336357 -51158617 + L1Md_F3 LINE L1 6095 6583 -1 4 984 758 306 42 79 chr15 52336357 52336401 -51158573 - L1M2 LINE L1 -1538 4605 4571 4 984 290 391 75 0 chr15 52336597 52336771 -51158203 - MIRb SINE MIR -40 228 42 4 984 21 0 0 0 chr15 52337487 52337508 -51157466 + AT_rich Low_complexity Low_complexity 1 21 0 4 984 228 182 0 22 chr15 52338542 52338587 -51156387 + T-rich Low_complexity Low_complexity 5 48 0 4 984 180 0 0 0 chr15 52339015 52339035 -51155939 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 4 984 354 333 68 42 chr15 52339816 52340007 -51154967 + MER63A DNA AcHobo 9 204 -6 4 984 22 0 0 0 chr15 52340197 52340219 -51154755 + AT_rich Low_complexity Low_complexity 1 22 0 4 984 212 253 6 0 chr15 52342198 52342364 -51152610 + (TA)n Simple_repeat Simple_repeat 1 167 0 4 984 675 55 28 9 chr15 52342483 52342592 -51152382 + (TAGA)n Simple_repeat Simple_repeat 4 114 0 5 984 395 413 58 35 chr15 52342634 52342895 -51152079 - MLT2B1 LTR ERVL -140 380 114 5 984 671 261 67 79 chr15 52343222 52343476 -51151498 - MLT1A1 LTR MaLR -11 397 147 5 984 1854 129 26 67 chr15 52344061 52344402 -51150572 + ORR1A4 LTR MaLR 1 327 -2 5 984 306 297 94 0 chr15 52344825 52344953 -51150021 + L1M3c LINE L1 265 404 -5737 5 984 1508 285 55 30 chr15 52344988 52345777 -51149197 + L1M3c LINE L1 4613 5420 -784 5 984 22 35 0 0 chr15 52346684 52346713 -51148261 + AT_rich Low_complexity Low_complexity 1 29 0 5 984 261 139 0 0 chr15 52346734 52346777 -51148197 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 5 984 460 267 86 0 chr15 52346822 52346927 -51148047 - RSINE1 SINE B4 -49 116 3 5 984 225 295 40 111 chr15 52347494 52347620 -51147354 - MIRc SINE MIR -65 197 81 5 984 236 308 0 49 chr15 52348639 52348721 -51146253 + MLT1C LTR MaLR 373 450 -17 5 984 252 337 49 10 chr15 52348733 52348835 -51146139 - MER106B DNA MER1_type -658 401 296 5 984 516 200 9 19 chr15 52349088 52349195 -51145779 + PB1D10 SINE Alu 1 106 -11 5 984 1966 176 26 9 chr15 52349831 52350180 -51144794 + ORR1B1 LTR MaLR 40 394 0 5 984 233 213 0 0 chr15 52350791 52350838 -51144136 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 984 258 156 0 0 chr15 52351036 52351081 -51143893 + GA-rich Low_complexity Low_complexity 2 46 0 5 984 28 0 0 0 chr15 52351301 52351329 -51143645 + AT_rich Low_complexity Low_complexity 1 28 0 5 984 207 0 0 0 chr15 52351342 52351365 -51143609 + (A)n Simple_repeat Simple_repeat 1 23 0 5 984 241 123 34 34 chr15 52351407 52351466 -51143508 + A-rich Low_complexity Low_complexity 4 62 0 5 984 395 122 37 0 chr15 52351490 52351572 -51143402 - RMER17C LTR ERVK -136 274 190 5 984 737 189 0 53 chr15 52351563 52351714 -51143260 + B1_Mur2 SINE Alu 7 149 0 5 984 1204 330 123 18 chr15 52351816 52352615 -51142359 + Lx8 LINE L1 6448 7330 -143 5 984 257 250 0 0 chr15 52353090 52353146 -51141828 + Lx6 LINE L1 7201 7256 -204 5 984 765 186 17 35 chr15 52353213 52353507 -51141467 + CT-rich Low_complexity Low_complexity 1 288 0 5 984 1172 17 0 72 chr15 52353507 52353701 -51141273 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 5 984 388 167 81 31 chr15 52353705 52353866 -51141108 + CT-rich Low_complexity Low_complexity 2 170 0 5 984 6643 120 22 4 chr15 52353878 52355485 -51139489 - L1_Mus3 LINE L1 -1 6637 5011 5 984 26695 75 9 17 chr15 52355512 52357468 -51137506 - L1Md_F2 LINE L1 -4 6578 4734 5 984 180 0 0 0 chr15 52357468 52357488 -51137486 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 5 984 26695 117 18 33 chr15 52357488 52357629 -51137345 - L1Md_F2 LINE L1 -1150 4733 4602 5 984 2129 94 30 0 chr15 52357629 52357927 -51137047 - L1_Mus1 LINE L1 0 6567 6261 5 984 26695 118 19 31 chr15 52357927 52362066 -51132908 - L1Md_F2 LINE L1 -1282 4601 434 5 984 357 215 0 0 chr15 52362089 52362182 -51132792 + CT-rich Low_complexity Low_complexity 1 93 0 5 984 384 229 20 41 chr15 52362182 52362328 -51132646 + Lx6 LINE L1 7316 7458 -2 5 984 737 278 30 20 chr15 52362347 52362549 -51132425 + B3 SINE B2 9 212 -4 5 984 306 50 0 0 chr15 52362709 52362749 -51132225 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 984 221 150 0 0 chr15 52362749 52362789 -51132185 + (GA)n Simple_repeat Simple_repeat 1 40 0 5 984 1748 281 81 17 chr15 52362824 52363476 -51131498 + Lx7 LINE L1 5626 6319 -1377 5 984 1538 142 0 39 chr15 52363494 52363773 -51131201 - L1_Mus4 LINE L1 -4 6632 6365 5 984 21093 104 8 6 chr15 52363775 52367871 -51127103 + L1_Mus2 LINE L1 2462 6565 -1 5 984 2584 56 6 9 chr15 52368626 52368966 -51126008 - L1Md_F2 LINE L1 -3 6579 6241 5 984 528 263 69 23 chr15 52369017 52369192 -51125782 + Lx7 LINE L1 415 597 -7131 5 984 18107 168 55 43 chr15 52369192 52369716 -51125258 + Lx7 LINE L1 987 1517 -4363 5 984 4717 50 2 0 chr15 52369716 52370295 -51124679 + L1_Mus1 LINE L1 5988 6567 0 5 984 18107 165 82 50 chr15 52370295 52373849 -51121125 + Lx7 LINE L1 1518 5188 -692 5 984 232 70 47 0 chr15 52373849 52373892 -51121082 + (TTG)n Simple_repeat Simple_repeat 2 46 0 5 984 18107 206 86 23 chr15 52373892 52375819 -51119155 + Lx7 LINE L1 5189 7243 -453 5 984 590 192 60 30 chr15 52375827 52375993 -51118981 - RMER1B Other Other 0 1066 896 5 984 2426 112 3 77 chr15 52375993 52376381 -51118593 - RLTR10D LTR ERVK 0 359 1 5 984 3224 55 0 2 chr15 52376381 52376797 -51118177 - IAP-d-int LTR ERVK 0 6542 6128 5 984 21563 51 12 14 chr15 52376800 52379284 -51115690 - IAP-d-int LTR ERVK -521 6021 3531 5 984 4150 52 20 11 chr15 52379284 52379824 -51115150 + L1Md_F3 LINE L1 6026 6570 -14 5 984 21563 51 12 14 chr15 52379824 52380179 -51114795 - IAP-d-int LTR ERVK -3012 3530 3188 5 984 5092 50 45 43 chr15 52380246 52380984 -51113990 - IAP-d-int LTR ERVK -5803 739 1 5 984 2496 101 3 70 chr15 52380984 52381369 -51113605 - RLTR10D LTR ERVK 0 359 1 5 984 2718 230 106 21 chr15 52381370 52382143 -51112831 - RMER1B Other Other -166 900 62 5 984 246 215 154 0 chr15 52382185 52382250 -51112724 + Lx7 LINE L1 7247 7321 -375 5 984 239 152 0 33 chr15 52382282 52382321 -51112653 + polypyrimidine Low_complexity Low_complexity 23 60 0 5 984 204 125 0 0 chr15 52382321 52382353 -51112621 + (TCG)n Simple_repeat Simple_repeat 2 33 0 5 984 239 152 0 33 chr15 52382353 52382374 -51112600 + polypyrimidine Low_complexity Low_complexity 2 22 0 5 984 1379 124 19 77 chr15 52382378 52382639 -51112335 - Lx3B LINE L1 -3 6970 6725 5 984 272 137 20 0 chr15 52382745 52382796 -51112178 + CT-rich Low_complexity Low_complexity 3 54 0 5 984 1314 201 39 30 chr15 52382802 52383135 -51111839 + Lx7 LINE L1 7358 7693 -3 5 984 225 178 0 0 chr15 52383937 52383982 -51110992 - L1_Mur3 LINE L1 -360 5937 5893 5 984 287 248 47 79 chr15 52384143 52384270 -51110704 - L1_Mur3 LINE L1 -780 5520 5398 5 984 292 325 29 12 chr15 52384453 52384693 -51110281 - L1_Mur3 LINE L1 -909 5234 4991 5 984 683 259 75 124 chr15 52384706 52385645 -51109329 - L1_Mur3 LINE L1 -1469 4674 3792 5 984 21 0 0 0 chr15 52385957 52385978 -51108996 + AT_rich Low_complexity Low_complexity 1 21 0 5 984 266 288 27 14 chr15 52386302 52386376 -51108598 + LTR50 LTR ERVL 68 142 -653 5 984 540 0 0 0 chr15 52386399 52386459 -51108515 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 984 227 133 31 62 chr15 52386569 52386633 -51108341 + (CAAA)n Simple_repeat Simple_repeat 2 63 0 5 984 272 303 118 24 chr15 52386768 52386937 -51108037 + LTR50 LTR ERVL 471 655 -140 5 984 23 68 0 0 chr15 52387376 52387420 -51107554 + AT_rich Low_complexity Low_complexity 1 44 0 5 984 197 159 0 22 chr15 52387438 52387483 -51107491 + T-rich Low_complexity Low_complexity 3 46 0 5 984 303 28 0 0 chr15 52387550 52387586 -51107388 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 984 2926 214 82 25 chr15 52387655 52388334 -51106640 - Lx9 LINE L1 -556 7088 6371 5 984 194 338 0 0 chr15 52388581 52388652 -51106322 - MIRb SINE MIR -103 165 95 5 984 888 99 0 0 chr15 52389801 52389952 -51105022 + (GA)n Simple_repeat Simple_repeat 1 151 0 5 984 228 86 0 0 chr15 52390028 52390063 -51104911 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 984 188 329 52 52 chr15 52390735 52390812 -51104162 - MIRm SINE MIR -128 148 72 5 984 459 0 0 0 chr15 52392354 52392405 -51102569 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 984 335 279 97 56 chr15 52393524 52393668 -51101306 - MER70B LTR ERVL 0 472 323 5 984 414 0 0 0 chr15 52393678 52393724 -51101250 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 984 414 0 0 0 chr15 52393724 52393769 -51101205 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 984 448 253 21 0 chr15 52393769 52393864 -51101110 - MER70B LTR ERVL -434 144 48 5 984 304 198 70 0 chr15 52393911 52393997 -51100977 + CT-rich Low_complexity Low_complexity 4 95 0 5 984 464 344 76 51 chr15 52394890 52395166 -51099808 + ORR1E LTR MaLR 75 357 -2 5 984 976 282 70 33 chr15 52395932 52396364 -51098610 - MLT2B4 LTR ERVL -42 512 1 5 984 216 0 0 0 chr15 52399515 52399539 -51095435 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 5 984 25422 177 5 15 chr15 52399850 52400670 -51094304 + L1VL4 LINE L1 558 1367 -4516 5 984 1228 31 50 0 chr15 52400670 52400831 -51094143 - L1Md_F3 LINE L1 0 6584 6416 5 984 25422 155 15 15 chr15 52400831 52405334 -51089640 + L1VL4 LINE L1 1368 5872 -11 5 984 1268 98 5 5 chr15 52405343 52405538 -51089436 + L1_Mus4 LINE L1 6440 6634 -2 5 984 3812 162 28 17 chr15 52405559 52406267 -51088707 + Lx2B LINE L1 6285 7000 0 5 984 654 123 0 0 chr15 52406708 52406838 -51088136 + (GA)n Simple_repeat Simple_repeat 1 130 0 5 984 22 56 0 0 chr15 52406973 52407009 -51087965 + AT_rich Low_complexity Low_complexity 1 36 0 5 984 362 333 36 0 chr15 52407155 52407323 -51087651 - Lx9 LINE L1 -215 7429 7256 5 984 225 294 164 59 chr15 52407391 52407817 -51087157 + L1MC4 LINE L1 1173 1643 -4572 5 984 480 381 73 25 chr15 52408117 52408362 -51086612 + LTR16A LTR ERVL 181 437 -14 5 984 389 330 25 10 chr15 52409249 52409451 -51085523 + HERV16-int LTR ERVL 947 1151 -3845 5 984 295 290 39 46 chr15 52409665 52409795 -51085179 - MER5A1 DNA MER1_type -6 160 32 5 984 1007 324 31 39 chr15 52410441 52410827 -51084147 + MLT1B LTR MaLR 4 386 -4 5 984 241 279 0 0 chr15 52411570 52411631 -51083343 + GA-rich Low_complexity Low_complexity 4 64 0 5 984 848 195 50 0 chr15 52412107 52412266 -51082708 - URR1A DNA MER1_type -15 211 45 5 984 3097 40 42 0 chr15 52412424 52412804 -51082170 + MTA_Mm LTR MaLR 1 396 0 5 984 307 319 58 63 chr15 52413350 52413607 -51081367 - MIR SINE MIR -8 260 3 5 984 240 288 0 57 chr15 52413685 52413755 -51081219 + ID4 SINE ID 2 67 -16 5 984 501 17 0 0 chr15 52413760 52413818 -51081156 + (TGAA)n Simple_repeat Simple_repeat 3 60 0 5 984 267 300 65 22 chr15 52414663 52414755 -51080219 + ERVL-B4-int LTR ERVL 1475 1570 -4144 5 984 2137 334 65 41 chr15 52415017 52416071 -51078903 - Lx5 LINE L1 -19 7031 5953 5 984 23 0 0 0 chr15 52416082 52416105 -51078869 + AT_rich Low_complexity Low_complexity 1 23 0 5 984 369 0 0 0 chr15 52416159 52416200 -51078774 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 984 453 311 36 22 chr15 52416256 52416394 -51078580 - RSINE1 SINE B4 -14 151 12 5 984 2320 81 36 3 chr15 52416935 52417270 -51077704 + L1_Mus3 LINE L1 6287 6632 -6 5 984 498 304 52 0 chr15 52417585 52417720 -51077254 - RSINE1 SINE B4 -21 144 3 5 984 398 350 79 21 chr15 52417810 52417950 -51077024 + RSINE1 SINE B4 3 150 -15 5 984 264 179 125 10 chr15 52418572 52418668 -51076306 + Lx LINE L1 6496 6602 -52 5 984 4936 136 59 23 chr15 52418851 52419770 -51075204 + RMER17B LTR ERVK 1 952 -6 5 984 919 172 29 0 chr15 52419772 52419946 -51075028 + URR1B DNA MER1_type 47 225 0 5 984 829 350 63 17 chr15 52420325 52420849 -51074125 + ERVL-B4-int LTR ERVL 3855 4402 -1312 5 984 718 186 21 7 chr15 52425121 52425262 -51069712 + B1_Mus1 SINE Alu 6 148 0 5 984 615 240 156 39 chr15 52425581 52425976 -51068998 - RMER20B LTR ERVK -14 613 116 6 984 297 238 218 0 chr15 52426511 52426612 -51068362 - MER46C DNA MER2_type -206 132 10 6 984 231 319 144 4 chr15 52426648 52426813 -51068161 - MIR SINE MIR -44 224 25 6 984 397 156 0 0 chr15 52427719 52427783 -51067191 - URR1B DNA MER1_type 0 225 162 6 984 1470 210 115 6 chr15 52427784 52428105 -51066869 + ORR1B2 LTR MaLR 1 356 -11 6 984 439 136 25 0 chr15 52428106 52428187 -51066787 - URR1B DNA MER1_type -60 165 83 6 985 1219 159 34 0 chr15 52429170 52429376 -51065598 + ORR1C2 LTR MaLR 1 213 -171 6 985 1980 216 168 33 chr15 52429376 52429893 -51065081 - RMER19B LTR ERVK 0 902 316 6 985 916 189 47 6 chr15 52429921 52430091 -51064883 + ORR1C2 LTR MaLR 208 384 0 6 985 339 343 18 9 chr15 52430236 52430345 -51064629 + PB1D10 SINE Alu 7 116 -1 6 985 23 0 0 0 chr15 52430614 52430637 -51064337 + AT_rich Low_complexity Low_complexity 1 23 0 6 985 360 0 0 0 chr15 52430769 52430809 -51064165 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 985 239 296 148 0 chr15 52431740 52431821 -51063153 + ID_B1 SINE B4 132 224 0 6 985 28 95 0 0 chr15 52431997 52432081 -51062893 + AT_rich Low_complexity Low_complexity 1 84 0 6 985 255 87 87 0 chr15 52432092 52432161 -51062813 + (TA)n Simple_repeat Simple_repeat 1 75 0 6 985 2164 123 9 9 chr15 52433299 52433626 -51061348 + ORR1A2 LTR MaLR 1 327 0 6 985 22 0 0 0 chr15 52434100 52434122 -51060852 + AT_rich Low_complexity Low_complexity 1 22 0 6 985 3576 26 0 7 chr15 52434278 52434701 -51060273 + L1Md_F3 LINE L1 6149 6568 -16 6 985 325 404 57 13 chr15 52436018 52436246 -51058728 + MLT1B LTR MaLR 29 266 -246 6 985 656 330 76 76 chr15 52436539 52437041 -51057933 - MLT1D LTR MaLR -3 502 1 6 985 4780 171 63 7 chr15 52437120 52437980 -51056994 - RMER13B LTR ERVK 0 908 1 6 985 372 319 80 62 chr15 52438187 52438511 -51056463 + MLT1B-int LTR MaLR 407 736 -651 6 985 538 276 107 47 chr15 52438726 52439045 -51055929 - MER96B DNA hAT 0 417 80 6 985 186 133 0 0 chr15 52439226 52439256 -51055718 + (TATATG)n Simple_repeat Simple_repeat 6 35 0 6 985 664 340 99 9 chr15 52439467 52439811 -51055163 + MLT1B LTR MaLR 16 390 0 6 985 525 345 46 6 chr15 52439912 52440087 -51054887 - RMER30 DNA MER1_type -8 194 13 6 985 2078 177 18 13 chr15 52440182 52440572 -51054402 - ORR1B1 LTR MaLR 0 394 3 6 985 338 323 140 13 chr15 52440649 52440878 -51054096 + Lx8 LINE L1 7199 7585 -59 6 985 255 31 0 0 chr15 52440965 52440997 -51053977 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 985 205 379 9 19 chr15 52441013 52441118 -51053856 - L4 LINE RTE -219 1810 1707 6 985 361 310 57 11 chr15 52441833 52442009 -51052965 + L2a LINE L2 2336 2519 -900 6 985 410 368 88 33 chr15 52442243 52442608 -51052366 - MLT1D LTR MaLR 0 505 121 6 985 247 307 147 21 chr15 52442676 52442819 -51052155 + L2a LINE L2 3258 3418 -8 6 985 893 226 103 16 chr15 52443447 52443794 -51051180 - MTD LTR MaLR -2 417 19 6 985 471 35 0 0 chr15 52443845 52443902 -51051072 + (TTA)n Simple_repeat Simple_repeat 1 57 0 6 985 322 243 39 0 chr15 52443902 52444005 -51050969 - Lx4B LINE L1 -7 7051 6945 6 985 1446 259 245 74 chr15 52444005 52445044 -51049930 - MTD-int LTR MaLR -39 1219 3 6 985 745 207 46 9 chr15 52445059 52445254 -51049720 - MTD LTR MaLR -13 408 196 6 985 457 196 58 19 chr15 52445262 52445366 -51049608 - RMER15 LTR ERVL -105 470 363 6 985 458 337 21 32 chr15 52445357 52445544 -51049430 - MTD LTR MaLR -196 223 39 6 985 486 0 0 0 chr15 52447219 52447273 -51047701 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 985 405 154 0 0 chr15 52447490 52447581 -51047393 + (CATA)n Simple_repeat Simple_repeat 2 92 0 6 985 2843 163 65 6 chr15 52447675 52448186 -51046788 + Lx4A LINE L1 6497 7037 -21 6 985 583 333 0 19 chr15 52448387 52448546 -51046428 - B3A SINE B2 -16 182 27 6 985 285 155 0 0 chr15 52448546 52448604 -51046370 + T-rich Low_complexity Low_complexity 1 58 0 6 985 1866 30 4 4 chr15 52448608 52448838 -51046136 - L1Md_F3 LINE L1 -14 6570 6341 6 985 1566 55 0 0 chr15 52448838 52449055 -51045919 + L1_Mm LINE L1 3273 3489 -2394 6 985 456 19 0 0 chr15 52449566 52449619 -51045355 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 985 431 174 17 17 chr15 52449620 52449737 -51045237 + GA-rich Low_complexity Low_complexity 3 119 0 6 985 351 228 51 0 chr15 52449842 52449921 -51045053 + MIRc SINE MIR 76 158 -110 6 985 189 307 80 0 chr15 52450732 52450807 -51044167 + MIRc SINE MIR 182 262 -6 6 985 217 271 275 15 chr15 52450827 52450958 -51044016 - MIRb SINE MIR -26 242 78 6 985 242 298 121 0 chr15 52451289 52451413 -51043561 - MIR SINE MIR 0 262 124 6 985 42 48 0 0 chr15 52451779 52451842 -51043132 + AT_rich Low_complexity Low_complexity 1 63 0 6 985 23 0 0 0 chr15 52452634 52452657 -51042317 + AT_rich Low_complexity Low_complexity 1 23 0 6 985 449 255 179 118 chr15 52452917 52453264 -51041710 + RLTR9A LTR ERVK 1 368 0 6 985 201 250 61 20 chr15 52453631 52453729 -51041245 + (TAGA)n Simple_repeat Simple_repeat 1 102 0 6 985 420 309 122 78 chr15 52454075 52454345 -51040629 + LTR85a LTR Gypsy? 295 576 -126 6 985 377 214 0 12 chr15 52455936 52456021 -51038953 + Lx9 LINE L1 7094 7177 -467 6 985 475 205 19 18 chr15 52456031 52456255 -51038719 + Lx9 LINE L1 7338 7643 -1 6 985 353 102 17 0 chr15 52456320 52456379 -51038595 + (CATA)n Simple_repeat Simple_repeat 1 60 0 6 985 1714 275 75 44 chr15 52456467 52457688 -51037286 + RMER1B Other Other 1 1055 -11 6 985 184 263 34 34 chr15 52457745 52457804 -51037170 - MIR SINE MIR -38 224 166 6 985 233 183 17 0 chr15 52458288 52458348 -51036626 + GA-rich Low_complexity Low_complexity 2 62 0 6 985 1092 235 43 172 chr15 52458681 52458880 -51036094 - ORR1B1 LTR MaLR -9 385 192 6 985 801 82 0 0 chr15 52458880 52458990 -51035984 + (GGA)n Simple_repeat Simple_repeat 3 112 0 6 985 1092 235 43 172 chr15 52458990 52459232 -51035742 - ORR1B1 LTR MaLR -203 191 1 6 985 444 82 0 0 chr15 52459427 52459488 -51035486 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 985 39348 4 1 0 chr15 52459609 52465976 -51028998 - L1Md_A LINE L1 0 6582 207 6 985 949 203 24 34 chr15 52465976 52466185 -51028789 - URR1B DNA MER1_type -17 208 2 6 985 426 210 24 8 chr15 52466292 52466428 -51028546 + MTC LTR MaLR 3 146 -254 6 985 305 258 0 10 chr15 52466957 52467055 -51027919 + L1MEg LINE L1 1241 1337 -4747 6 985 21 0 0 0 chr15 52467081 52467102 -51027872 + AT_rich Low_complexity Low_complexity 1 21 0 6 985 1062 89 76 0 chr15 52468365 52468522 -51026452 + B2_Mm2 SINE B2 1 169 -26 6 985 896 289 174 20 chr15 52468656 52469440 -51025534 + L1_Mur3 LINE L1 4287 5190 -690 6 985 21 0 0 0 chr15 52470060 52470081 -51024893 + AT_rich Low_complexity Low_complexity 1 21 0 6 985 182 118 29 0 chr15 52470700 52470734 -51024240 + (TTG)n Simple_repeat Simple_repeat 2 36 0 6 985 517 234 40 16 chr15 52470756 52470882 -51024092 - MLT1A1 LTR MaLR 0 408 280 6 985 396 188 114 86 chr15 52470885 52471025 -51023949 - B1F2 SINE Alu -2 147 4 6 985 450 229 21 10 chr15 52471332 52471429 -51023545 + PB1D7 SINE Alu 23 120 0 6 985 771 279 42 7 chr15 52471459 52471790 -51023184 - L1M5 LINE L1 -585 5594 5254 6 985 477 0 0 0 chr15 52471847 52471900 -51023074 + (TC)n Simple_repeat Simple_repeat 1 53 0 6 985 379 292 104 0 chr15 52471900 52472006 -51022968 - B1_Mur1 SINE Alu -20 129 13 6 985 252 334 64 35 chr15 52472007 52472556 -51022418 - L1M5 LINE L1 -956 5190 4626 6 985 29 78 0 0 chr15 52472608 52472672 -51022302 + AT_rich Low_complexity Low_complexity 1 64 0 6 985 447 168 10 0 chr15 52472705 52472806 -51022168 + Lx9 LINE L1 7543 7644 0 6 985 228 35 0 0 chr15 52473496 52473525 -51021449 + BGLII LTR ERVK 16 44 -377 6 985 238 0 81 0 chr15 52473527 52473564 -51021410 + (TAAAA)n Simple_repeat Simple_repeat 2 41 0 6 985 7813 114 53 11 chr15 52473652 52475070 -51019904 - Lx3C LINE L1 -7 6969 5482 6 985 2484 80 53 42 chr15 52475070 52475449 -51019525 + RLTR9A2 LTR ERVK 1 383 0 6 985 3513 139 39 16 chr15 52475449 52475672 -51019302 - Lx3C LINE L1 -405 5481 5260 6 985 1516 122 15 37 chr15 52475671 52475944 -51019030 + Lx3C LINE L1 4994 5260 -626 6 985 876 283 77 27 chr15 52476230 52476644 -51018330 + L1MA9 LINE L1 5841 6275 -37 6 985 196 168 47 16 chr15 52477877 52478004 -51016970 + (TA)n Simple_repeat Simple_repeat 1 131 0 6 985 637 315 89 41 chr15 52479031 52479494 -51015480 - Lx8 LINE L1 -21 7452 6968 6 985 243 0 0 0 chr15 52479523 52479550 -51015424 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 985 36814 5 2 0 chr15 52480188 52485760 -51009214 + L1Md_A LINE L1 7 5586 -297 6 985 9000 5 0 0 chr15 52485760 52486756 -51008218 + L1Md_A LINE L1 5587 6582 0 6 985 282 278 10 20 chr15 52487311 52487410 -51007564 + GA-rich Low_complexity Low_complexity 2 99 0 6 985 600 50 0 0 chr15 52487572 52487652 -51007322 + (TC)n Simple_repeat Simple_repeat 1 80 0 6 985 444 352 149 25 chr15 52487712 52487954 -51007020 - B4A SINE B4 -12 280 9 6 985 200 0 73 24 chr15 52488086 52488127 -51006847 + (TTTTG)n Simple_repeat Simple_repeat 1 43 0 6 985 602 328 140 59 chr15 52488146 52488769 -51006205 + Tigger9a DNA Tigger 58 730 -2 6 985 213 149 24 81 chr15 52488882 52489006 -51005968 + (CCCTAA)n Simple_repeat Simple_repeat 6 122 0 6 985 228 200 0 20 chr15 52489397 52489448 -51005526 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 985 2447 156 41 5 chr15 52489588 52489981 -51004993 + MTC LTR MaLR 1 407 -14 6 985 223 341 48 80 chr15 52490494 52490682 -51004292 - L2c LINE L2 -155 3232 3051 6 985 1112 82 7 0 chr15 52490831 52490977 -51003997 - B1_Mus1 SINE Alu 0 148 2 6 985 21 36 0 0 chr15 52491112 52491140 -51003834 + AT_rich Low_complexity Low_complexity 1 28 0 6 985 36343 32 0 0 chr15 52491496 52498138 -50996836 - L1Md_T LINE L1 0 6585 1 6 985 2117 244 84 7 chr15 52498317 52498863 -50996111 + Lx5 LINE L1 6462 7049 -1 6 985 213 342 136 0 chr15 52500008 52500163 -50994811 + L2 LINE L2 2530 2705 -714 1 985 1763 189 70 8 chr15 52500351 52500709 -50994265 - RMER20B LTR ERVK -247 380 1 2 985 1480 279 25 30 chr15 52500715 52501658 -50993316 - L1_Mur3 LINE L1 -7029 683 1 3 985 21 36 0 0 chr15 52501663 52501691 -50993283 + AT_rich Low_complexity Low_complexity 1 28 0 4 985 243 0 0 0 chr15 52503044 52503071 -50991903 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 985 1099 67 0 0 chr15 52503072 52503207 -50991767 - B1_Mm SINE Alu -12 135 1 6 985 2177 191 175 18 chr15 52503240 52503737 -50991237 + RMER15 LTR ERVL 1 575 0 7 985 405 0 0 0 chr15 52504685 52504730 -50990244 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 985 21 0 0 0 chr15 52505200 52505221 -50989753 + AT_rich Low_complexity Low_complexity 1 21 0 9 985 233 271 27 41 chr15 52505632 52505705 -50989269 + MLT1J-int LTR MaLR 848 919 -468 1 985 1057 89 0 32 chr15 52506528 52506714 -50988260 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1 985 736 134 7 7 chr15 52506737 52506872 -50988102 + (TTTC)n Simple_repeat Simple_repeat 4 138 0 1 985 254 351 67 7 chr15 52507141 52507276 -50987698 - MIRc SINE MIR -48 220 78 1 985 278 328 165 16 chr15 52509005 52509126 -50985848 + RSINE1 SINE B4 9 147 -18 1 985 22 0 0 0 chr15 52509211 52509233 -50985741 + AT_rich Low_complexity Low_complexity 1 22 0 1 985 3620 74 2 12 chr15 52509716 52510207 -50984767 - L1_Mus4 LINE L1 -2 6634 6149 1 985 254 298 0 0 chr15 52510792 52510849 -50984125 - ERVL-int LTR ERVL -4311 1446 1390 1 985 2199 115 3 0 chr15 52511960 52512273 -50982701 + ORR1A2 LTR MaLR 1 314 -13 1 985 242 279 0 55 chr15 52512537 52512548 -50982426 - L1M2 LINE L1 -557 5787 5779 1 985 432 77 39 0 chr15 52512548 52512626 -50982348 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 2 985 475 245 14 1 chr15 52512626 52512764 -50982210 - L1M2 LINE L1 -566 5778 5642 1 985 1849 175 78 3 chr15 52512768 52513112 -50981862 - ORR1C1 LTR MaLR -8 370 1 2 985 480 295 157 41 chr15 52513113 52513891 -50981083 - L1M2 LINE L1 -658 5645 4783 1 985 29 70 0 0 chr15 52514023 52514080 -50980894 + AT_rich Low_complexity Low_complexity 1 57 0 2 985 269 185 12 47 chr15 52514156 52514241 -50980733 + A-rich Low_complexity Low_complexity 4 85 0 2 985 1040 275 55 88 chr15 52514346 52515303 -50979671 - L1_Mur3 LINE L1 -1289 4591 3666 2 985 499 52 0 13 chr15 52515307 52515385 -50979589 + L1Md_F3 LINE L1 6506 6582 -2 2 985 22236 61 1 4 chr15 52515455 52519226 -50975748 - L1Md_F2 LINE L1 -3 6579 2825 2 985 333 308 50 50 chr15 52519478 52519618 -50975356 - L1M2 LINE L1 -2789 3354 3215 1 985 1330 324 44 15 chr15 52519696 52520244 -50974730 + Lx8 LINE L1 6339 6902 -571 2 985 254 195 85 0 chr15 52520463 52520545 -50974429 + Charlie6 DNA MER1_type 2883 2971 -529 2 985 315 0 0 0 chr15 52520581 52520616 -50974358 + (T)n Simple_repeat Simple_repeat 1 35 0 2 985 499 275 84 11 chr15 52520880 52521071 -50973903 + Charlie6 DNA MER1_type 3291 3495 -5 2 985 225 0 0 0 chr15 52521611 52521636 -50973338 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 985 186 118 0 0 chr15 52521636 52521669 -50973305 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 985 197 321 0 18 chr15 52522003 52522060 -50972914 - L3 LINE CR1 -502 3987 3932 3 985 509 262 64 41 chr15 52522380 52522551 -50972423 - ORSL-2b DNA Tip100 -329 179 5 3 985 288 261 0 11 chr15 52523085 52523178 -50971796 + Lx6 LINE L1 7343 7434 -26 3 985 22 35 0 0 chr15 52523185 52523214 -50971760 + AT_rich Low_complexity Low_complexity 1 29 0 3 985 338 217 0 0 chr15 52523217 52523277 -50971697 + ID_B1 SINE B4 160 219 -5 3 985 302 351 47 46 chr15 52523337 52523547 -50971427 - MLT1F2 LTR MaLR -184 443 183 3 985 1252 232 50 93 chr15 52523556 52523755 -50971219 - ORR1C2 LTR MaLR -2 382 173 3 985 513 0 0 0 chr15 52523755 52523812 -50971162 + (GA)n Simple_repeat Simple_repeat 2 58 0 3 985 1252 232 50 93 chr15 52523812 52524011 -50970963 - ORR1C2 LTR MaLR -212 172 2 3 985 197 313 9 57 chr15 52524542 52524647 -50970327 - L2 LINE L2 -819 2600 2501 4 985 21 36 0 0 chr15 52524785 52524813 -50970161 + AT_rich Low_complexity Low_complexity 1 28 0 4 985 805 260 97 8 chr15 52525673 52525921 -50969053 + B4A SINE B4 5 274 -18 4 985 348 24 0 0 chr15 52525956 52525997 -50968977 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 985 437 210 22 7 chr15 52526303 52526442 -50968532 + CT-rich Low_complexity Low_complexity 1 141 0 4 985 579 165 9 0 chr15 52526832 52526941 -50968033 + Lx3A LINE L1 6868 6977 -4 4 985 207 0 0 0 chr15 52526949 52526972 -50968002 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 4 985 3674 231 78 27 chr15 52527048 52528017 -50966957 + RMER1B Other Other 44 1062 -4 4 985 30 83 0 0 chr15 52528499 52528571 -50966403 + AT_rich Low_complexity Low_complexity 1 72 0 4 985 581 361 97 35 chr15 52528867 52529495 -50965479 + L2a LINE L2 1578 2244 -1175 4 985 662 238 69 11 chr15 52529504 52529635 -50965339 - ORR1D1 LTR MaLR 0 374 234 5 985 1296 174 8 28 chr15 52529635 52529883 -50965091 + RLTR22_Mur LTR ERVK 1 243 -1605 5 985 681 237 15 0 chr15 52530254 52530385 -50964589 - ETnERV2-int LTR ERVK -204 7202 7070 5 985 9261 134 15 51 chr15 52530386 52532046 -50962928 + RLTR22_Mur LTR ERVK 224 1824 -24 5 985 601 220 222 17 chr15 52532049 52532225 -50962749 - ORR1D1 LTR MaLR -162 212 1 5 985 660 348 90 51 chr15 52532238 52532905 -50962069 + L2a LINE L2 2306 2998 -421 4 985 458 289 29 49 chr15 52533111 52533315 -50961659 + L2a LINE L2 3222 3421 -5 4 985 534 301 58 94 chr15 52534122 52534346 -50960628 + B3A SINE B2 1 216 0 5 985 361 306 111 44 chr15 52534650 52534947 -50960027 + L1ME1 LINE L1 5666 5982 -197 5 985 229 241 0 0 chr15 52534957 52535011 -50959963 + L1MA10 LINE L1 6171 6224 -110 5 985 1202 68 0 0 chr15 52535769 52535915 -50959059 + B1_Mm SINE Alu 2 147 0 5 985 767 207 121 6 chr15 52537670 52537835 -50957139 + ORR1D1 LTR MaLR 1 184 -190 5 985 636 102 0 0 chr15 52537835 52537933 -50957041 + (TC)n Simple_repeat Simple_repeat 1 98 0 5 985 992 231 5 33 chr15 52537935 52538150 -50956824 + ORR1D1 LTR MaLR 166 374 0 5 985 1921 115 112 22 chr15 52538318 52538639 -50956335 - Lx3C LINE L1 -2 6974 6625 5 985 705 217 19 32 chr15 52539362 52539517 -50955457 - MTE2b LTR MaLR 0 379 227 6 985 1411 135 94 160 chr15 52539517 52539561 -50955413 - RMER10B LTR ERVL -2 396 356 6 985 234 0 0 0 chr15 52539561 52539587 -50955387 + (ATTAG)n Simple_repeat Simple_repeat 2 27 0 6 985 1411 135 94 160 chr15 52539587 52539966 -50955008 - RMER10B LTR ERVL -43 355 3 6 985 340 255 68 68 chr15 52539971 52540089 -50954885 - MTE2b LTR MaLR -152 227 110 6 985 883 239 70 26 chr15 52540088 52540259 -50954715 - RMER17C LTR ERVK -5 405 186 6 985 437 0 19 0 chr15 52540259 52540312 -50954662 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 985 883 147 15 40 chr15 52540312 52540498 -50954476 - RMER17C LTR ERVK -225 185 2 6 985 3181 60 147 2 chr15 52540772 52541207 -50953767 - L1_Mus2 LINE L1 0 6566 6069 6 985 694 266 137 18 chr15 52541537 52541688 -50953286 + ORR1D2 LTR MaLR 4 172 -198 6 985 207 0 0 0 chr15 52541688 52541711 -50953263 + (TC)n Simple_repeat Simple_repeat 2 24 0 6 985 342 0 0 0 chr15 52541711 52541748 -50953226 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 985 694 266 137 18 chr15 52541748 52541821 -50953153 + ORR1D2 LTR MaLR 173 255 -115 6 985 938 185 63 122 chr15 52541858 52542111 -50952863 - ORR1B1 LTR MaLR -116 278 41 6 985 340 279 137 91 chr15 52542126 52542323 -50952651 + MLT1E2 LTR MaLR 20 225 -402 7 985 331 333 18 9 chr15 52542475 52542584 -50952390 + MLT1E2 LTR MaLR 273 382 -123 7 985 271 261 149 30 chr15 52543369 52543503 -50951471 + Tigger7 DNA MER2_type 2302 2451 -40 7 985 237 65 0 0 chr15 52545275 52545306 -50949668 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 985 220 313 0 25 chr15 52545731 52545827 -50949147 - MIRc SINE MIR -117 151 59 7 985 3453 25 2 0 chr15 52545857 52546252 -50948722 - MTA_Mm LTR MaLR 0 396 1 7 985 353 273 10 20 chr15 52546633 52546734 -50948240 - MIRb SINE MIR -78 190 91 7 985 317 350 55 30 chr15 52547801 52547966 -50947008 - L1MC4a LINE L1 -1901 5981 5813 7 985 417 123 0 0 chr15 52547967 52548032 -50946942 + (TTTC)n Simple_repeat Simple_repeat 2 66 0 7 985 853 258 49 4 chr15 52548170 52548415 -50946559 + Lx6 LINE L1 7035 7290 -170 7 985 195 379 34 11 chr15 52549344 52549432 -50945542 + L2b LINE L2 3257 3346 -29 7 985 357 256 148 41 chr15 52550224 52550346 -50944628 - ID_B1 SINE B4 -8 216 82 8 985 261 62 92 0 chr15 52550604 52550669 -50944305 + (TA)n Simple_repeat Simple_repeat 1 71 0 8 985 2819 153 73 4 chr15 52552697 52553219 -50941755 - RLTR17 LTR ERVK 0 692 135 8 985 25 0 0 0 chr15 52553447 52553472 -50941502 + AT_rich Low_complexity Low_complexity 1 25 0 8 985 1059 77 0 7 chr15 52553837 52553980 -50940994 + B1_Mus1 SINE Alu 7 148 0 8 985 1610 268 103 11 chr15 52554245 52554908 -50940066 - Lx7 LINE L1 -420 7276 6553 8 985 579 66 0 0 chr15 52555153 52555229 -50939745 + (GGGA)n Simple_repeat Simple_repeat 4 79 0 8 985 452 81 0 13 chr15 52555761 52555836 -50939138 + (TTGG)n Simple_repeat Simple_repeat 2 75 0 8 985 696 206 53 8 chr15 52555836 52555968 -50939006 - B1_Mus2 SINE Alu -8 139 2 8 985 525 321 89 9 chr15 52555968 52556182 -50938792 - B4A SINE B4 -61 231 1 8 985 268 254 80 0 chr15 52556319 52556399 -50938575 - RSINE1 SINE B4 -36 129 44 9 985 210 71 0 0 chr15 52558515 52558543 -50936431 + (CACCAT)n Simple_repeat Simple_repeat 5 32 0 9 985 281 314 125 17 chr15 52558547 52558667 -50936307 - B1F SINE Alu -12 137 5 9 986 952 304 88 78 chr15 52560258 52560954 -50934020 - RMER13A LTR ERVK -156 704 2 9 986 1163 205 74 168 chr15 52561077 52561482 -50933492 + ORR1D1 LTR MaLR 8 374 0 9 986 25 31 0 0 chr15 52561951 52561983 -50932991 + AT_rich Low_complexity Low_complexity 1 32 0 9 986 38888 29 0 0 chr15 52562375 52568805 -50926169 - L1Md_T LINE L1 0 6585 96 9 986 5540 96 31 18 chr15 52568812 52569578 -50925396 - Lx3_Mus LINE L1 0 7009 6234 9 986 1325 150 27 5 chr15 52569609 52569830 -50925144 - URR1A DNA MER1_type 0 226 1 9 986 288 339 58 0 chr15 52572328 52572449 -50922525 + AmnSINE1 SINE SINE 243 370 -205 9 986 259 280 50 107 chr15 52572982 52573122 -50921852 + MER5A DNA MER1_type 31 162 -27 1 986 631 273 30 6 chr15 52573277 52573443 -50921531 + MER5B DNA MER1_type 9 178 0 1 986 274 132 0 36 chr15 52573581 52573636 -50921338 - B3 SINE B2 0 216 164 1 986 4360 23 38 0 chr15 52575035 52575510 -50919464 + MT2_Mm LTR ERVL 1 493 0 1 986 328 288 116 31 chr15 52575515 52575644 -50919330 - RSINE1 SINE B4 -4 161 22 1 986 353 333 16 16 chr15 52576205 52576327 -50918647 + RMER15 LTR ERVL 300 421 -154 1 986 1397 165 4 22 chr15 52576705 52576934 -50918040 - URR1B DNA MER1_type 0 225 1 1 986 3809 122 22 8 chr15 52577204 52577800 -50917174 - Lx2 LINE L1 -414 6583 5980 1 986 2536 137 2 37 chr15 52577802 52578211 -50916763 + Lx2 LINE L1 6602 6996 -1 1 986 23 0 0 0 chr15 52578215 52578238 -50916736 + AT_rich Low_complexity Low_complexity 1 23 0 1 986 447 128 0 0 chr15 52578275 52578361 -50916613 + (T)n Simple_repeat Simple_repeat 1 86 0 1 986 805 252 54 16 chr15 52578394 52578589 -50916385 + B3 SINE B2 1 198 0 1 986 872 276 100 54 chr15 52578638 52579110 -50915864 - Lx9 LINE L1 -1 7643 7121 1 986 1633 299 27 6 chr15 52579105 52579616 -50915358 - Lx9 LINE L1 -760 6884 6363 1 986 369 0 0 0 chr15 52579618 52579659 -50915315 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 986 309 26 0 0 chr15 52579663 52579701 -50915273 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 986 309 325 0 0 chr15 52579758 52579835 -50915139 - ID4_ SINE ID -4 79 3 1 986 253 239 171 0 chr15 52579844 52579932 -50915042 - PB1 SINE Alu -2 125 23 1 986 238 338 77 30 chr15 52580633 52580801 -50914173 - MIRb SINE MIR -79 189 14 1 986 225 231 39 0 chr15 52580969 52581021 -50913953 + MIRb SINE MIR 198 251 -17 1 986 283 328 120 34 chr15 52581892 52582090 -50912884 - MIR SINE MIR -27 235 31 1 986 290 228 127 0 chr15 52583895 52583974 -50911000 - MIRb SINE MIR -77 191 103 1 986 443 328 35 70 chr15 52584060 52584319 -50910655 - MLT1L LTR MaLR -111 499 250 1 986 2264 122 6 17 chr15 52584766 52585124 -50909850 - ORR1B1 LTR MaLR 0 394 41 1 986 221 167 0 0 chr15 52585148 52585190 -50909784 + (ATTG)n Simple_repeat Simple_repeat 2 43 0 1 986 294 327 9 17 chr15 52585450 52585565 -50909409 + MER5A1 DNA MER1_type 12 125 -41 1 986 186 71 0 0 chr15 52585658 52585686 -50909288 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1 986 225 83 0 0 chr15 52585681 52585717 -50909257 + (GGTTG)n Simple_repeat Simple_repeat 5 40 0 1 986 717 188 120 0 chr15 52585717 52585850 -50909124 - B1_Mur4 SINE Alu -1 149 1 1 986 314 347 59 0 chr15 52586034 52586204 -50908770 + MER63A DNA AcHobo 3 182 -28 1 986 254 260 14 0 chr15 52586519 52586592 -50908382 + CT-rich Low_complexity Low_complexity 2 75 0 1 986 207 0 0 0 chr15 52586612 52586635 -50908339 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 986 660 87 0 0 chr15 52586830 52586922 -50908052 + (TC)n Simple_repeat Simple_repeat 1 92 0 1 986 244 313 121 58 chr15 52587384 52587608 -50907366 + MER102b DNA MER1_type 104 341 0 1 986 956 286 50 3 chr15 52587646 52587944 -50907030 + MTE2a LTR MaLR 5 316 -63 1 986 261 331 99 0 chr15 52588109 52588260 -50906714 - MER5A1 DNA MER1_type 0 166 1 1 986 594 321 123 20 chr15 52588536 52588886 -50906088 - LTR82A LTR ERVL -400 472 87 1 986 513 328 66 57 chr15 52590243 52590604 -50904370 + ORR1E LTR MaLR 4 379 0 1 986 3545 60 2 0 chr15 52590909 52591327 -50903647 - L1Md_F2 LINE L1 -13 6569 6151 1 986 390 298 50 0 chr15 52591428 52591549 -50903425 - ID_B1 SINE B4 0 224 98 1 986 736 319 10 62 chr15 52593601 52593631 -50901343 - B4A SINE B4 0 292 266 1 986 378 0 0 0 chr15 52593631 52593673 -50901301 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 986 366 115 0 0 chr15 52593673 52593733 -50901241 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 986 736 319 10 62 chr15 52593733 52594008 -50900966 - B4A SINE B4 -27 265 3 1 986 1069 288 112 9 chr15 52594341 52594762 -50900212 - Lx8 LINE L1 -195 7278 6815 1 986 1208 168 46 5 chr15 52595328 52595544 -50899430 + URR1A DNA MER1_type 1 225 -1 1 986 462 330 76 27 chr15 52595901 52596347 -50898627 - HAL1 LINE L1 -1063 1444 977 1 986 331 273 15 29 chr15 52596349 52596485 -50898489 + GA-rich Low_complexity Low_complexity 4 137 0 1 986 387 41 0 0 chr15 52596965 52597014 -50897960 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 986 510 17 0 0 chr15 52597014 52597072 -50897902 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 986 649 223 53 8 chr15 52597079 52597265 -50897709 + L1MA4A LINE L1 5732 5929 -374 1 986 314 226 153 0 chr15 52597361 52597485 -50897489 + L1MA4A LINE L1 6073 6215 -85 1 986 4809 141 2 11 chr15 52597582 52598401 -50896573 - L1_Mur2 LINE L1 -1824 4062 3251 1 986 6524 156 10 2 chr15 52598398 52599501 -50895473 + L1_Mur2 LINE L1 4035 5146 -731 1 986 7877 84 9 2 chr15 52599486 52600678 -50894296 + L1_Mus3 LINE L1 5438 6638 0 1 986 238 222 48 0 chr15 52600958 52601021 -50893953 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 986 225 0 0 0 chr15 52601654 52601679 -50893295 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 986 2787 67 6 3 chr15 52601806 52602151 -50892823 + L1_Mus3 LINE L1 6290 6635 -3 1 986 215 293 45 108 chr15 52602971 52603082 -50891892 - B3A SINE B2 0 198 95 1 986 207 0 0 0 chr15 52603082 52603105 -50891869 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1 986 8253 30 2 1 chr15 52603107 52604490 -50890484 - L1Md_F2 LINE L1 -11 6571 5189 1 986 1179 35 0 0 chr15 52604485 52604628 -50890346 + L1_Mm LINE L1 1768 1910 -3973 1 986 569 268 0 0 chr15 52604628 52604740 -50890234 - B3A SINE B2 -86 112 1 1 986 562 308 5 5 chr15 52604773 52604959 -50890015 + L1MC3 LINE L1 7376 7561 -224 1 986 469 332 58 47 chr15 52604971 52605246 -50889728 + B4 SINE B4 1 278 -14 1 986 312 143 0 0 chr15 52607746 52607802 -50887172 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 986 195 162 0 0 chr15 52608284 52608321 -50886653 + T-rich Low_complexity Low_complexity 4 40 0 1 986 1464 75 43 0 chr15 52608322 52608508 -50886466 - B2_Mm2 SINE B2 0 195 2 1 986 371 98 0 0 chr15 52608536 52608587 -50886387 + L1Md_F2 LINE L1 180 230 -6386 1 986 232 253 43 98 chr15 52608589 52608681 -50886293 - LTR90A LTR LTR -58 918 832 1 986 706 170 360 0 chr15 52608681 52608906 -50886068 + L1Md_F2 LINE L1 324 629 -5987 1 986 27378 51 2 7 chr15 52608904 52612627 -50882347 + L1Md_F2 LINE L1 928 4613 -1270 1 986 3350 44 0 0 chr15 52612619 52613025 -50881949 + L1Md_T LINE L1 6177 6582 0 1 986 22143 50 2 5 chr15 52613025 52614014 -50880960 + L1Md_F2 LINE L1 4606 5582 -301 1 986 7903 52 2 4 chr15 52614017 52615012 -50879962 + L1Md_F2 LINE L1 5587 6579 -3 1 986 180 296 39 48 chr15 52615240 52615343 -50879631 + MIRb SINE MIR 116 217 -51 1 986 269 391 33 82 chr15 52615809 52616079 -50878895 - ORR1E LTR MaLR -41 318 62 1 986 243 186 17 0 chr15 52616442 52616501 -50878473 + A-rich Low_complexity Low_complexity 2 61 0 1 986 378 311 104 39 chr15 52617845 52618076 -50876898 + ORR1E LTR MaLR 8 253 -106 1 986 330 26 0 0 chr15 52618156 52618195 -50876779 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 986 919 254 14 5 chr15 52618337 52618547 -50876427 + B3 SINE B2 1 212 -4 1 986 615 318 51 42 chr15 52618628 52618769 -50876205 - Lx8 LINE L1 0 7473 7336 1 986 198 0 0 0 chr15 52618769 52618791 -50876183 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 1 986 615 318 51 42 chr15 52618791 52618984 -50875990 - Lx8 LINE L1 -138 7335 7136 1 986 593 262 169 0 chr15 52619019 52619179 -50875795 - B3A SINE B2 -11 187 1 1 986 659 207 20 7 chr15 52619208 52619359 -50875615 - Lx8 LINE L1 -380 7093 6941 1 986 7295 75 5 4 chr15 52620084 52621108 -50873866 + L1Md_F2 LINE L1 4562 5586 -297 1 986 8122 42 4 0 chr15 52621109 52622086 -50872888 + L1Md_F2 LINE L1 5588 6568 -14 1 986 211 341 43 91 chr15 52622665 52622852 -50872122 - L2c LINE L2 -2 3385 3208 1 986 285 351 51 36 chr15 52623033 52623228 -50871746 - L2c LINE L2 -374 3045 2848 1 986 231 121 34 17 chr15 52623292 52623351 -50871623 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 986 831 64 0 0 chr15 52623352 52623462 -50871512 + (GA)n Simple_repeat Simple_repeat 1 110 0 1 986 2697 146 133 19 chr15 52623575 52624100 -50870874 + RMER4B LTR ERVK 1 585 0 1 986 399 21 0 0 chr15 52624137 52624185 -50870789 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 986 8333 14 0 0 chr15 52626936 52627872 -50867102 + L1Md_A LINE L1 5647 6582 0 1 986 321 47 0 0 chr15 52627881 52627924 -50867050 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 986 274 279 125 0 chr15 52628780 52628884 -50866090 - MIR SINE MIR 0 262 146 1 986 332 214 0 79 chr15 52628884 52628960 -50866014 - B3 SINE B2 -145 71 2 1 986 235 364 13 0 chr15 52629011 52629088 -50865886 - MIR SINE MIR -177 85 8 1 986 200 188 0 0 chr15 52629192 52629224 -50865750 + (ACTG)n Simple_repeat Simple_repeat 2 33 0 1 986 522 309 25 69 chr15 52629267 52629427 -50865547 - RSINE1 SINE B4 -4 161 9 1 986 239 326 0 39 chr15 52629697 52629799 -50865175 + L2c LINE L2 3248 3345 -42 1 986 510 277 7 35 chr15 52630473 52630615 -50864359 - ID_B1 SINE B4 0 224 87 1 986 311 330 53 9 chr15 52630902 52631015 -50863959 + MIRc SINE MIR 14 131 -137 1 986 347 324 141 21 chr15 52631184 52631279 -50863695 + MLT1B LTR MaLR 68 170 -220 1 986 291 28 0 0 chr15 52631279 52631315 -50863659 + (GA)n Simple_repeat Simple_repeat 2 37 0 1 986 347 324 141 21 chr15 52631315 52631503 -50863471 + MLT1B LTR MaLR 171 384 -6 1 986 432 329 141 27 chr15 52631811 52632073 -50862901 + B4A SINE B4 1 292 0 1 986 483 18 0 0 chr15 52632199 52632255 -50862719 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 986 330 195 0 0 chr15 52632255 52632332 -50862642 + (ATGGTG)n Simple_repeat Simple_repeat 1 77 0 1 986 578 277 28 17 chr15 52632336 52632516 -50862458 - B3A SINE B2 -16 182 1 1 986 253 287 49 56 chr15 52633920 52634064 -50860910 - L1MD2 LINE L1 -13 6346 6204 1 986 1978 174 53 0 chr15 52634789 52635163 -50859811 - ORR1B1 LTR MaLR 0 394 1 1 986 607 318 66 41 chr15 52635246 52635489 -50859485 - B4A SINE B4 0 292 44 1 986 3221 142 41 14 chr15 52635666 52636253 -50858721 + Lx2 LINE L1 6395 6997 0 1 986 258 295 43 26 chr15 52636540 52636655 -50858319 - PB1D10 SINE Alu 0 117 1 1 986 384 22 0 0 chr15 52638118 52638163 -50856811 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 986 26 30 0 0 chr15 52638447 52638480 -50856494 + AT_rich Low_complexity Low_complexity 1 33 0 2 986 229 365 17 33 chr15 52638687 52638820 -50856154 + L2a LINE L2 3270 3426 0 2 986 872 318 57 78 chr15 52638965 52639402 -50855572 + LTR16A1 LTR ERVL 1 428 -28 2 986 251 301 104 15 chr15 52640185 52640320 -50854654 + ERVL-E-int LTR ERVL 1241 1387 -4280 2 986 233 77 0 49 chr15 52640686 52640727 -50854247 + (CATA)n Simple_repeat Simple_repeat 4 42 0 2 986 1227 34 0 14 chr15 52640869 52641017 -50853957 - B1_Mus2 SINE Alu 0 147 2 2 986 303 302 21 0 chr15 52641110 52641206 -50853768 - MLT1J2 LTR MaLR -3 445 348 2 986 352 268 163 10 chr15 52641262 52641360 -50853614 + B3A SINE B2 48 160 -38 2 986 402 39 0 0 chr15 52641365 52641417 -50853557 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 986 277 330 99 91 chr15 52642125 52642368 -50852606 + MLT1F2 LTR MaLR 201 445 -124 2 986 233 271 41 116 chr15 52642407 52642553 -50852421 - L1MD2 LINE L1 -14 6345 6211 2 986 231 36 0 0 chr15 52642738 52642766 -50852208 + (CCCCCT)n Simple_repeat Simple_repeat 2 29 0 2 986 1501 63 16 0 chr15 52643013 52643203 -50851771 + B2_Mm2 SINE B2 3 195 0 2 986 910 168 0 7 chr15 52643311 52643461 -50851513 - B1_Mur4 SINE Alu -1 149 1 2 986 183 42 0 0 chr15 52645247 52645271 -50849703 + (TAA)n Simple_repeat Simple_repeat 1 24 0 2 986 220 330 110 0 chr15 52645486 52645595 -50849379 - MIRb SINE MIR -104 164 44 2 986 34141 62 1 3 chr15 52645831 52651227 -50843747 - L1Md_F2 LINE L1 0 6582 1203 2 986 468 91 0 0 chr15 52652091 52652157 -50842817 + (GGGA)n Simple_repeat Simple_repeat 3 68 0 2 986 219 359 64 0 chr15 52652186 52652264 -50842710 + RSINE1 SINE B4 75 157 -8 2 986 29 0 0 0 chr15 52652279 52652308 -50842666 + AT_rich Low_complexity Low_complexity 1 29 0 2 986 1129 156 83 7 chr15 52653447 52653702 -50841272 + MYSERV16_I-int LTR ERVK 2027 2299 -27 2 986 192 40 0 0 chr15 52653702 52653727 -50841247 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2 986 1129 156 83 7 chr15 52653727 52653748 -50841226 + MYSERV16_I-int LTR ERVK 2300 2323 -3 2 986 2547 188 30 18 chr15 52653750 52654249 -50840725 + RLTR16 LTR ERVK 1 505 0 2 986 1175 254 71 53 chr15 52654278 52654438 -50840536 + Lx8 LINE L1 6972 7131 -342 2 986 5637 74 27 0 chr15 52654438 52655182 -50839792 - L1_Mus1 LINE L1 0 6567 5804 2 986 1175 254 71 53 chr15 52655182 52655512 -50839462 + Lx8 LINE L1 7132 7471 -2 2 986 452 162 0 0 chr15 52656055 52656135 -50838839 - L1_Mm LINE L1 -411 5472 5393 2 986 300 337 0 0 chr15 52657229 52657321 -50837653 + MTD LTR MaLR 43 134 -285 2 986 31985 76 8 8 chr15 52657397 52662253 -50832721 - L1Md_F2 LINE L1 -11 6571 1718 2 986 207 0 0 0 chr15 52662253 52662276 -50832698 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 986 1155 68 0 0 chr15 52662276 52662422 -50832552 - B1_Mus1 SINE Alu -2 146 1 2 986 31985 99 42 3 chr15 52662422 52663730 -50831244 - L1Md_F2 LINE L1 -4166 1717 355 2 986 22 35 0 0 chr15 52664476 52664505 -50830469 + AT_rich Low_complexity Low_complexity 1 29 0 2 986 800 285 93 22 chr15 52664914 52665183 -50829791 - B4A SINE B4 -4 288 1 2 986 1265 273 81 28 chr15 52665541 52666012 -50828962 - Lx8 LINE L1 -385 7088 6593 2 986 252 0 0 0 chr15 52666187 52666215 -50828759 + (TAGA)n Simple_repeat Simple_repeat 4 31 0 2 986 351 0 0 0 chr15 52666216 52666255 -50828719 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2 986 627 289 14 0 chr15 52666675 52666817 -50828157 + RSINE1 SINE B4 22 165 0 2 986 189 178 0 0 chr15 52666822 52666867 -50828107 + (CAGA)n Simple_repeat Simple_repeat 4 48 0 2 986 230 221 45 125 chr15 52667041 52667129 -50827845 - LTR45 LTR ERV1 -302 223 143 2 986 540 0 0 0 chr15 52667618 52667678 -50827296 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 986 624 27 0 0 chr15 52668330 52668404 -50826570 + (GGGA)n Simple_repeat Simple_repeat 4 77 0 2 986 208 108 54 0 chr15 52668405 52668442 -50826532 + (CAGAGA)n Simple_repeat Simple_repeat 1 39 0 2 986 879 112 20 20 chr15 52668954 52669100 -50825874 - URR1A DNA MER1_type 0 226 81 2 986 36194 32 1 0 chr15 52669141 52676873 -50818101 - L1Md_T LINE L1 0 6585 1 2 986 669 133 0 0 chr15 52677741 52677846 -50817128 - B2_Mm2 SINE B2 -90 105 1 2 986 260 400 9 9 chr15 52677975 52678091 -50816883 - MIR SINE MIR -115 147 32 2 986 328 354 76 83 chr15 52678862 52679164 -50815810 - ORR1E LTR MaLR -4 355 56 2 986 332 282 98 26 chr15 52679279 52679432 -50815542 - MIRb SINE MIR -6 262 99 2 986 930 328 74 30 chr15 52679702 52680243 -50814731 + L2a LINE L2 2171 2735 -684 2 986 5565 61 4 0 chr15 52680251 52680953 -50814021 + L1_Mus1 LINE L1 5863 6567 0 2 986 1051 101 0 0 chr15 52680970 52681108 -50813866 + B1_Mus1 SINE Alu 2 139 -9 2 986 203 0 0 36 chr15 52681108 52681136 -50813838 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 986 291 379 14 40 chr15 52681139 52681362 -50813612 + L2a LINE L2 2960 3176 -250 2 986 274 385 68 64 chr15 52681873 52682092 -50812882 + MLT1I-int LTR MaLR 2 221 -1166 2 986 1961 197 76 11 chr15 52682238 52682710 -50812264 + Lx9 LINE L1 7134 7636 -8 2 986 24 77 0 0 chr15 52682827 52682879 -50812095 + AT_rich Low_complexity Low_complexity 1 52 0 2 986 297 0 0 0 chr15 52682940 52682973 -50812001 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 986 2208 226 68 28 chr15 52683124 52683726 -50811248 - RMER1B Other Other -2 1064 439 2 986 271 384 35 47 chr15 52683984 52684156 -50810818 + MLT1I LTR MaLR 13 182 -229 2 986 653 23 23 0 chr15 52685089 52685175 -50809799 + (TCTA)n Simple_repeat Simple_repeat 2 89 0 2 986 302 230 35 0 chr15 52685388 52685475 -50809499 - L1M4b LINE L1 -5025 2309 2220 2 986 6819 157 42 13 chr15 52685508 52686712 -50808262 - Lx2B LINE L1 0 7000 5762 2 986 9091 155 30 33 chr15 52686713 52688555 -50806419 + Lx2B LINE L1 3906 5741 -136 2 986 576 259 117 11 chr15 52689541 52689721 -50805253 - Lx8 LINE L1 -10 7463 7265 2 987 365 0 0 22 chr15 52691224 52691270 -50803704 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 987 397 237 46 0 chr15 52691273 52691409 -50803565 - Lx8 LINE L1 -362 5938 5783 2 987 215 31 31 0 chr15 52691410 52691442 -50803532 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 987 212 204 23 0 chr15 52691442 52691486 -50803488 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 2 987 451 331 75 6 chr15 52691756 52691929 -50803045 - MER58A DNA MER1_type -39 185 1 2 987 269 290 128 17 chr15 52692045 52692217 -50802757 - MER33 DNA MER1_type -112 212 22 2 987 210 170 18 36 chr15 52692675 52692730 -50802244 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 2 987 451 327 116 27 chr15 52693365 52693623 -50801351 + B4A SINE B4 2 282 -10 2 987 369 0 0 0 chr15 52693628 52693669 -50801305 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 987 576 0 0 0 chr15 52693669 52693732 -50801242 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 987 204 206 15 31 chr15 52693741 52693806 -50801168 + (CAAA)n Simple_repeat Simple_repeat 1 64 0 2 987 209 366 68 88 chr15 52693901 52694209 -50800765 + L2b LINE L2 3083 3386 -1 2 987 185 299 47 93 chr15 52694900 52695007 -50799967 + L2b LINE L2 3241 3342 -33 2 987 1044 279 119 20 chr15 52695065 52695409 -50799565 - MTD LTR MaLR -24 395 18 2 987 2635 38 0 3 chr15 52695666 52695985 -50798989 + L1Md_F2 LINE L1 6253 6570 -12 2 987 231 312 17 52 chr15 52696279 52696394 -50798580 + MIR SINE MIR 132 242 -20 2 987 237 326 63 0 chr15 52696530 52696625 -50798349 - MIRb SINE MIR -91 177 77 2 987 191 339 64 32 chr15 52696700 52696825 -50798149 + L2a LINE L2 3297 3425 -1 2 987 614 317 113 32 chr15 52697102 52697350 -50797624 + B4 SINE B4 2 269 -23 2 987 396 0 0 0 chr15 52697352 52697396 -50797578 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 987 23 22 0 61 chr15 52697776 52697825 -50797149 + AT_rich Low_complexity Low_complexity 1 46 0 2 987 218 319 117 28 chr15 52698017 52698162 -50796812 + MER5A DNA MER1_type 3 160 -29 2 987 367 337 18 59 chr15 52698599 52698769 -50796205 - RSINE1 SINE B4 0 165 3 2 987 228 67 0 0 chr15 52700233 52700263 -50794711 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 987 478 300 115 52 chr15 52700577 52700925 -50794049 - ORR1D2 LTR MaLR 0 370 1 2 987 222 37 0 0 chr15 52701049 52701076 -50793898 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 987 21 71 0 0 chr15 52702211 52702253 -50792721 + AT_rich Low_complexity Low_complexity 1 42 0 2 987 704 286 130 38 chr15 52702414 52702448 -50792526 - B4 SINE B4 -6 286 257 2 987 535 327 99 19 chr15 52702448 52702710 -50792264 - B4A SINE B4 -8 284 2 2 987 792 271 112 21 chr15 52702710 52702937 -50792037 - B4A SINE B4 -36 256 1 2 987 278 133 0 0 chr15 52703090 52703135 -50791839 - L1_Mm LINE L1 -268 5615 5571 2 987 3830 48 2 12 chr15 52703136 52703617 -50791357 + L1Md_F2 LINE L1 6095 6570 -12 2 987 279 133 0 0 chr15 52703722 52703767 -50791207 + (TTC)n Simple_repeat Simple_repeat 2 46 0 2 987 35400 27 3 7 chr15 52705287 52710691 -50784283 + L1Md_A LINE L1 210 5586 -297 2 987 8562 27 0 0 chr15 52710691 52711685 -50783289 + L1Md_A LINE L1 5587 6580 -2 2 987 3503 90 6 111 chr15 52711688 52711987 -50782987 + L1_Mus3 LINE L1 5288 5585 -298 2 987 8374 36 0 1 chr15 52711987 52712984 -50781990 + L1Md_A LINE L1 5587 6582 0 2 987 3503 90 6 111 chr15 52712984 52713076 -50781898 + L1_Mus3 LINE L1 5586 5630 -253 2 987 785 92 17 0 chr15 52713076 52713195 -50781779 + (TTTC)n Simple_repeat Simple_repeat 3 123 0 2 987 3503 90 6 111 chr15 52713195 52713218 -50781756 + L1_Mus3 LINE L1 5631 5631 -252 2 987 3422 111 57 0 chr15 52713218 52713731 -50781243 - L1_Mus3 LINE L1 0 6638 6097 2 987 3503 73 9 0 chr15 52713731 52714194 -50780780 + L1_Mus3 LINE L1 5631 6097 -541 2 987 313 264 76 7 chr15 52714645 52714790 -50780184 - L1M5 LINE L1 -665 5499 5345 2 987 617 279 108 99 chr15 52714844 52715206 -50779768 - MLT1A0 LTR MaLR 0 365 1 2 987 433 330 129 42 chr15 52715206 52715687 -50779287 - L1M5 LINE L1 -885 5261 4739 2 987 214 320 120 88 chr15 52715898 52716090 -50778884 + B3 SINE B2 6 203 -13 2 987 472 290 153 33 chr15 52716101 52716401 -50778573 + L1M4 LINE L1 2254 2589 -3557 2 987 545 288 115 6 chr15 52716401 52716578 -50778396 - Tigger7 DNA MER2_type -166 384 190 2 987 242 304 40 7 chr15 52716662 52716811 -50778163 - L1M5 LINE L1 -3118 3028 2875 2 987 222 156 0 0 chr15 52716965 52717010 -50777964 + (CG)n Simple_repeat Simple_repeat 1 45 0 2 987 198 0 0 0 chr15 52717010 52717032 -50777942 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 987 287 115 33 0 chr15 52717172 52717233 -50777741 + (CAGA)n Simple_repeat Simple_repeat 2 64 0 3 987 879 227 64 0 chr15 52717430 52717633 -50777341 + B3 SINE B2 1 216 0 3 987 183 42 0 0 chr15 52717670 52717694 -50777280 + (CAGAGA)n Simple_repeat Simple_repeat 2 25 0 3 987 271 317 73 8 chr15 52719636 52719760 -50775214 + MLT1I LTR MaLR 5 136 -275 3 987 4610 90 49 29 chr15 52719871 52720604 -50774370 + RMER17A LTR ERVK 1 748 -3 3 987 236 314 28 4 chr15 52721440 52721517 -50773457 + MIR SINE MIR 112 187 -81 3 987 389 310 40 17 chr15 52721962 52722136 -50772838 + Lx6 LINE L1 7257 7434 -26 3 987 1202 247 35 112 chr15 52722157 52722558 -50772416 + ORR1D2 LTR MaLR 1 370 0 3 987 595 314 76 8 chr15 52722707 52722957 -50772017 + BLACKJACK DNA AcHobo 66 332 -2612 3 987 613 321 6 19 chr15 52723110 52723272 -50771702 + RSINE1 SINE B4 6 165 0 3 987 628 326 90 26 chr15 52723307 52723874 -50771100 + BLACKJACK DNA AcHobo 2275 2877 -67 3 987 1299 96 14 28 chr15 52726214 52726428 -50768546 - L1_Mus3 LINE L1 -3 6635 6425 3 987 207 0 0 0 chr15 52727283 52727306 -50767668 + (TTA)n Simple_repeat Simple_repeat 3 25 0 3 987 210 295 77 33 chr15 52727352 52727443 -50767531 + MIRb SINE MIR 98 192 -76 3 987 359 320 50 50 chr15 52727975 52728136 -50766838 + MER117 DNA MER1_type 29 189 -8 3 987 463 351 94 15 chr15 52729051 52729317 -50765657 + B4A SINE B4 4 290 -2 3 987 264 303 40 0 chr15 52729443 52729519 -50765455 + MIRb SINE MIR 61 139 -129 3 987 963 304 14 30 chr15 52730551 52730997 -50763977 + Lx8 LINE L1 7007 7455 -18 3 987 347 297 98 49 chr15 52732125 52732493 -50762481 - MLT1B LTR MaLR -2 388 3 3 987 396 0 0 0 chr15 52732651 52732695 -50762279 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 987 1604 235 84 13 chr15 52734979 52735358 -50759616 + MTD LTR MaLR 12 417 -2 3 987 261 242 0 0 chr15 52735533 52735624 -50759350 + (TG)n Simple_repeat Simple_repeat 2 92 0 3 987 707 0 12 0 chr15 52735624 52735707 -50759267 + (TAGA)n Simple_repeat Simple_repeat 3 86 0 3 987 581 144 0 9 chr15 52735709 52735814 -50759160 + GA-rich Low_complexity Low_complexity 2 105 0 3 987 186 43 0 0 chr15 52735814 52735837 -50759137 + (TGG)n Simple_repeat Simple_repeat 3 25 0 3 987 2437 179 56 34 chr15 52735860 52736364 -50758610 - RLTR20B3 LTR ERVK -42 535 21 3 987 225 200 33 16 chr15 52736367 52736428 -50758546 + (TATG)n Simple_repeat Simple_repeat 2 63 0 3 987 306 106 0 0 chr15 52736428 52736475 -50758499 + (TGG)n Simple_repeat Simple_repeat 3 49 0 3 987 793 298 4 78 chr15 52736482 52736726 -50758248 - B4A SINE B4 -66 226 1 3 987 708 45 0 0 chr15 52737596 52737684 -50757290 + (TG)n Simple_repeat Simple_repeat 2 89 0 3 987 1227 48 0 0 chr15 52737775 52737921 -50757053 + B1_Mus2 SINE Alu 2 147 0 3 987 623 300 59 30 chr15 52737938 52738175 -50756799 - B4A SINE B4 -46 246 3 3 987 270 0 0 0 chr15 52738387 52738417 -50756557 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 3 987 1878 70 8 0 chr15 52738428 52738686 -50756288 - L1_Mus1 LINE L1 -43 6524 6265 3 987 252 0 0 0 chr15 52738783 52738811 -50756163 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 3 987 949 228 25 0 chr15 52738851 52739048 -50755926 + B3 SINE B2 5 206 -10 3 987 495 232 49 8 chr15 52739368 52739505 -50755469 + MLT1A0 LTR MaLR 226 407 -1 3 987 6839 57 40 44 chr15 52739928 52740928 -50754046 - L1Md_F2 LINE L1 0 6582 5587 3 987 923 107 0 12 chr15 52741191 52741352 -50753622 + (TTTC)n Simple_repeat Simple_repeat 2 160 0 3 987 516 288 190 83 chr15 52742234 52742476 -50752498 - B4A SINE B4 -15 277 10 3 987 523 365 65 60 chr15 52742533 52742574 -50752400 + MLT1G1 LTR MaLR 1 38 -541 3 987 2180 201 28 63 chr15 52742574 52743115 -50751859 - RLTR28 LTR ERVL -2 522 1 3 987 523 365 65 60 chr15 52743115 52743440 -50751534 + MLT1G1 LTR MaLR 39 369 -210 3 987 751 303 38 42 chr15 52743452 52743714 -50751260 - MLT1A0 LTR MaLR -12 353 93 3 987 385 333 8 24 chr15 52743794 52743920 -50751054 + MLT1G1 LTR MaLR 373 496 -99 3 987 2272 87 214 0 chr15 52743921 52744058 -50750916 + RLTR44E LTR ERVK 1 159 -293 3 987 405 0 0 0 chr15 52744058 52744103 -50750871 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 987 2272 87 214 0 chr15 52744103 52744335 -50750639 + RLTR44E LTR ERVK 160 448 -4 3 987 572 163 0 0 chr15 52744347 52744445 -50750529 + RLTR44-int LTR ERVK 1 98 -2714 3 987 847 118 0 48 chr15 52744465 52744771 -50750203 + RLTR44-int LTR ERVK 816 981 -1831 3 987 4134 313 41 45 chr15 52744951 52749771 -50745203 + RLTR44-int LTR ERVK 659 5106 -1436 3 987 5480 43 0 0 chr15 52749992 52750663 -50744311 + RLTR44-int LTR ERVK 2142 2812 0 3 987 662 78 0 0 chr15 52750670 52750760 -50744214 + RLTR44E LTR ERVK 1 90 -362 3 987 1443 188 123 48 chr15 52751555 52751912 -50743062 - ORR1C2 LTR MaLR 0 384 1 3 987 1128 274 79 32 chr15 52752090 52752433 -50742541 + ORR1E LTR MaLR 1 359 0 3 987 5108 277 61 24 chr15 52752435 52753868 -50741106 + ORR1E-int LTR MaLR 1 1486 -94 3 987 991 302 80 83 chr15 52753908 52754269 -50740705 + ORR1E LTR MaLR 11 370 0 3 987 590 270 77 34 chr15 52755216 52755423 -50739551 - RLTR9A LTR ERVK 0 368 153 3 987 791 113 11 6 chr15 52755430 52755580 -50739394 + MTB_Mm LTR MaLR 237 407 0 3 987 3008 302 24 32 chr15 52755605 52755891 -50739083 + Lx8 LINE L1 6350 6627 -846 3 987 1776 161 0 55 chr15 52755891 52756239 -50738735 + ORR1A4 LTR MaLR 1 329 0 3 987 3008 302 24 32 chr15 52756239 52757085 -50737889 + Lx8 LINE L1 6628 7473 0 3 987 245 280 68 23 chr15 52757087 52757293 -50737681 + Lx9 LINE L1 5759 5976 -1668 3 987 1380 314 69 71 chr15 52757504 52758307 -50736667 + Lx8 LINE L1 6207 7009 -464 3 987 240 86 0 0 chr15 52758307 52758342 -50736632 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 3 987 1380 314 69 71 chr15 52758342 52758436 -50736538 + Lx8 LINE L1 7010 7102 -371 3 987 1121 74 0 26 chr15 52758749 52758901 -50736073 + B1_Mus1 SINE Alu 1 148 0 3 987 561 68 0 0 chr15 52758914 52758988 -50735986 + (GGGA)n Simple_repeat Simple_repeat 4 77 0 3 987 5166 112 6 3 chr15 52760587 52761369 -50733605 - Lx4A LINE L1 -545 6513 5729 3 987 464 43 0 14 chr15 52761369 52761440 -50733534 - L1Md_F2 LINE L1 -1 6581 6512 3 987 3017 158 35 2 chr15 52761459 52761966 -50733008 + Lx4A LINE L1 6532 7055 -3 3 987 28 29 0 0 chr15 52761966 52762001 -50732973 + AT_rich Low_complexity Low_complexity 1 35 0 3 987 199 326 29 113 chr15 52762109 52762313 -50732661 + MIR SINE MIR 25 211 -51 3 987 318 321 99 96 chr15 52762775 52763047 -50731927 + B4 SINE B4 2 274 -18 3 987 218 273 15 15 chr15 52763059 52763126 -50731848 + (CA)n Simple_repeat Simple_repeat 1 67 0 3 987 323 305 70 100 chr15 52765192 52765462 -50729512 + MamRep605 Unknown Unknown 60 321 -555 3 987 2199 104 42 63 chr15 52765543 52765922 -50729052 + Lx LINE L1 6277 6647 -7 3 987 340 280 115 34 chr15 52766135 52766283 -50728691 + MTEb LTR MaLR 209 377 -2 3 987 325 257 158 0 chr15 52767238 52767339 -50727635 + PB1D10 SINE Alu 1 117 0 3 987 24 0 0 0 chr15 52767609 52767633 -50727341 + AT_rich Low_complexity Low_complexity 1 24 0 3 987 212 268 138 11 chr15 52768067 52768154 -50726820 - L2a LINE L2 -11 3415 3318 3 987 308 247 11 0 chr15 52768415 52768504 -50726470 + L1M5 LINE L1 5346 5435 -689 3 987 362 269 64 9 chr15 52769485 52769594 -50725380 + MIR SINE MIR 11 125 -137 3 987 626 301 158 29 chr15 52769759 52770109 -50724865 + MLT1I LTR MaLR 17 411 0 3 987 2654 69 0 0 chr15 52770425 52770843 -50724131 - L1_Mus3 LINE L1 -700 5938 5521 3 987 4805 66 38 1 chr15 52770843 52771497 -50723477 + L1_Mus3 LINE L1 5955 6632 -6 3 987 1056 87 0 0 chr15 52771797 52771946 -50723028 + (TCTCC)n Simple_repeat Simple_repeat 5 153 0 3 987 27 0 0 0 chr15 52772301 52772328 -50722646 + AT_rich Low_complexity Low_complexity 1 27 0 3 987 325 326 130 60 chr15 52772597 52772881 -50722093 - MLT1J1 LTR MaLR -136 308 5 3 987 1477 273 86 31 chr15 52772988 52773742 -50721232 + L1MB1 LINE L1 5351 6165 -3 3 987 22 0 0 0 chr15 52773743 52773765 -50721209 + AT_rich Low_complexity Low_complexity 1 22 0 3 987 253 324 10 19 chr15 52775515 52775619 -50719355 + GA-rich Low_complexity Low_complexity 4 106 0 3 987 518 146 10 0 chr15 52775789 52775885 -50719089 + CT-rich Low_complexity Low_complexity 1 97 0 3 987 285 281 101 89 chr15 52775929 52776097 -50718877 - MIR SINE MIR -91 171 2 3 987 637 270 6 52 chr15 52776672 52776844 -50718130 + RSINE1 SINE B4 2 165 0 3 987 2182 176 27 12 chr15 52776863 52777277 -50717697 - MTC LTR MaLR 0 421 2 3 987 187 298 91 45 chr15 52777430 52777518 -50717456 + MIR SINE MIR 70 161 -101 3 987 248 296 37 12 chr15 52777566 52777648 -50717326 + ID4 SINE ID 1 84 -68 3 987 337 253 38 12 chr15 52777708 52777788 -50717186 + B4A SINE B4 4 85 -207 3 987 524 304 173 5 chr15 52777813 52777998 -50716976 + B3 SINE B2 1 216 0 3 987 616 318 0 7 chr15 52778015 52778164 -50716810 + RSINE1 SINE B4 2 149 -16 3 987 192 40 0 0 chr15 52778165 52778190 -50716784 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 987 646 349 10 30 chr15 52778242 52778440 -50716534 + B4A SINE B4 99 292 0 3 987 931 199 4 113 chr15 52778638 52778876 -50716098 - B3 SINE B2 -1 215 4 3 987 360 346 49 27 chr15 52778878 52779101 -50715873 + MIRb SINE MIR 40 267 -1 3 987 355 233 13 0 chr15 52780649 52780765 -50714209 + L1MC LINE L1 3633 3754 -2392 3 987 515 320 120 37 chr15 52780967 52781317 -50713657 - LTR16A1 LTR ERVL -2 454 76 3 987 22 56 0 0 chr15 52783114 52783150 -50711824 + AT_rich Low_complexity Low_complexity 1 36 0 3 987 405 0 0 0 chr15 52783206 52783251 -50711723 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 987 371 314 78 0 chr15 52783389 52783549 -50711425 + MIR SINE MIR 4 173 -95 3 987 203 29 88 0 chr15 52784015 52784049 -50710925 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 3 987 231 294 12 0 chr15 52785370 52785455 -50709519 + (TA)n Simple_repeat Simple_repeat 2 87 0 3 987 785 279 45 75 chr15 52785507 52785948 -50709026 + LTR37B LTR ERV1 39 466 -2 4 987 409 245 230 7 chr15 52787402 52787550 -50707424 + B3A SINE B2 2 182 -16 4 987 764 283 10 19 chr15 52788101 52788310 -50706664 + B3 SINE B2 7 213 -3 4 987 4857 68 93 48 chr15 52788544 52788686 -50706288 + L1_Mus3 LINE L1 5863 6008 -630 4 987 1135 49 14 0 chr15 52788686 52788830 -50706144 + B1_Mus1 SINE Alu 2 147 -1 4 987 4857 68 93 48 chr15 52788830 52789430 -50705544 + L1_Mus3 LINE L1 6009 6638 0 4 987 727 298 47 79 chr15 52789632 52789974 -50705000 + MLT1B LTR MaLR 1 331 -59 4 987 363 89 29 38 chr15 52789974 52790003 -50704971 + A-rich Low_complexity Low_complexity 1 29 0 4 987 1146 56 7 0 chr15 52790003 52790147 -50704827 + B1_Mus2 SINE Alu 2 146 -1 4 987 363 89 29 38 chr15 52790147 52790222 -50704752 + A-rich Low_complexity Low_complexity 30 103 0 4 987 317 309 115 22 chr15 52790451 52790633 -50704341 - MIR SINE MIR -1 261 63 4 987 186 43 0 0 chr15 52790849 52790872 -50704102 + (T)n Simple_repeat Simple_repeat 1 23 0 4 987 428 376 45 78 chr15 52790886 52791350 -50703624 + L1ME4a LINE L1 5433 5881 -243 4 987 383 365 13 66 chr15 52791418 52791644 -50703330 - MamGypLTR1a LTR Gypsy -36 748 535 4 987 1075 6 21 72 chr15 52792191 52792528 -50702446 + (TAGA)n Simple_repeat Simple_repeat 1 319 0 4 987 566 264 80 0 chr15 52792590 52792715 -50702259 + RSINE1 SINE B4 3 137 -28 4 987 209 242 0 11 chr15 52793934 52794026 -50700948 + CT-rich Low_complexity Low_complexity 1 91 0 4 987 53 78 0 0 chr15 52794505 52794621 -50700353 + AT_rich Low_complexity Low_complexity 1 116 0 4 987 298 378 124 5 chr15 52794924 52795118 -50699856 - MLT1A0 LTR MaLR -100 265 49 4 987 46 33 0 0 chr15 52795144 52795204 -50699770 + AT_rich Low_complexity Low_complexity 1 60 0 4 987 30 27 0 0 chr15 52796603 52796640 -50698334 + AT_rich Low_complexity Low_complexity 1 37 0 4 987 3273 37 77 0 chr15 52797520 52797925 -50697049 + RLTR10C LTR ERVK 1 436 0 4 987 383 333 40 0 chr15 52797942 52798092 -50696882 - MIRb SINE MIR -84 184 29 4 987 434 332 108 23 chr15 52798098 52798357 -50696617 + B4A SINE B4 4 284 -8 4 987 207 176 0 0 chr15 52798365 52798399 -50696575 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 987 231 281 112 20 chr15 52798551 52798649 -50696325 - ORR1C1 LTR MaLR 0 378 272 4 987 197 440 0 0 chr15 52800000 52800084 -50694890 - MIRb SINE MIR -124 144 61 4 987 2519 311 48 46 chr15 52800326 52801463 -50693511 - Lx8 LINE L1 -131 7342 6204 4 987 21 0 0 0 chr15 52801570 52801591 -50693383 + AT_rich Low_complexity Low_complexity 1 21 0 4 987 696 235 0 0 chr15 52801675 52801811 -50693163 - B1_Mur2 SINE Alu -13 136 1 4 987 470 268 238 0 chr15 52801922 52802086 -50692888 + B3 SINE B2 5 207 -9 4 987 5573 39 1 0 chr15 52802409 52803074 -50691900 - L1Md_F2 LINE L1 0 6582 5917 4 987 7664 50 2 0 chr15 52803075 52804237 -50690737 - L1Md_F2 LINE L1 -12 6570 5407 4 987 37 62 0 0 chr15 52804544 52804609 -50690365 + AT_rich Low_complexity Low_complexity 1 65 0 4 987 240 149 0 0 chr15 52805031 52805078 -50689896 + (TTTTC)n Simple_repeat Simple_repeat 4 50 0 4 987 7792 63 48 41 chr15 52805085 52806233 -50688741 - Lx3_Mus LINE L1 0 7009 5854 4 987 1949 55 0 4 chr15 52806249 52806504 -50688470 + Lx3_Mus LINE L1 5601 5854 -1155 4 987 243 323 47 30 chr15 52806980 52807149 -50687825 + L1ME3 LINE L1 5474 5645 -517 4 987 439 330 137 20 chr15 52807287 52807593 -50687381 + L1ME3 LINE L1 5820 6161 -1 4 987 513 0 0 0 chr15 52807600 52807657 -50687317 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 4 987 477 122 0 0 chr15 52807704 52807778 -50687196 + (ATGGTG)n Simple_repeat Simple_repeat 4 77 0 4 987 695 274 43 5 chr15 52808404 52808591 -50686383 - ORR1D2 LTR MaLR -4 366 173 4 987 254 229 0 0 chr15 52809256 52809304 -50685670 + GA-rich Low_complexity Low_complexity 1 48 0 4 987 468 0 0 0 chr15 52810110 52810162 -50684812 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 4 987 2037 112 46 3 chr15 52810474 52810780 -50684194 + ORR1A2 LTR MaLR 1 319 -8 4 987 1224 215 148 21 chr15 52811260 52811597 -50683377 - MTD LTR MaLR 0 419 40 4 987 263 297 212 0 chr15 52811746 52811864 -50683110 + B4A SINE B4 149 291 -1 4 987 228 100 0 0 chr15 52811899 52811939 -50683035 + (CAGAGA)n Simple_repeat Simple_repeat 6 45 0 4 987 243 152 0 0 chr15 52812657 52812703 -50682271 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 987 1001 41 0 0 chr15 52813111 52813232 -50681742 - B1_Mm SINE Alu -10 137 17 4 987 231 343 0 0 chr15 52813237 52813307 -50681667 + CT-rich Low_complexity Low_complexity 4 73 0 4 987 1043 114 228 0 chr15 52813429 52813613 -50681361 + URR1A DNA MER1_type 1 226 0 4 987 591 300 229 8 chr15 52814311 52814808 -50680166 - L2 LINE L2 -559 2860 2254 4 987 30 77 0 0 chr15 52815035 52815100 -50679874 + AT_rich Low_complexity Low_complexity 1 65 0 4 987 6682 178 55 12 chr15 52815149 52815749 -50679225 - Lx5 LINE L1 -7 7043 6442 4 987 405 0 0 0 chr15 52815749 52815794 -50679180 + (TC)n Simple_repeat Simple_repeat 1 45 0 4 987 6682 178 55 12 chr15 52815794 52816562 -50678412 - Lx5 LINE L1 -609 6441 5619 4 987 189 0 0 0 chr15 52816676 52816697 -50678277 + (A)n Simple_repeat Simple_repeat 1 21 0 4 987 641 160 175 11 chr15 52816918 52817101 -50677873 - Lx9 LINE L1 0 7644 7432 4 987 389 299 0 0 chr15 52817317 52817434 -50677540 - Lx6 LINE L1 -156 7304 7188 4 987 1842 194 38 35 chr15 52817440 52817835 -50677139 + MTB_Mm LTR MaLR 1 396 -11 4 987 18235 205 53 30 chr15 52817837 52820259 -50674715 - Lx6 LINE L1 -317 6733 4279 4 987 201 74 0 0 chr15 52820259 52820286 -50674688 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 987 18235 178 52 21 chr15 52820286 52820848 -50674126 - Lx6 LINE L1 -1602 4278 3714 4 987 477 34 0 0 chr15 52820848 52820907 -50674067 + (TTTTA)n Simple_repeat Simple_repeat 4 62 0 4 123 18235 178 52 21 chr15 52820907 52822973 -50672001 - Lx6 LINE L1 -2167 3713 1587 4 988 261 0 0 0 chr15 52823387 52823416 -50671558 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 988 242 322 102 25 chr15 52823521 52823639 -50671335 + L2c LINE L2 2924 3050 -337 4 988 274 362 20 54 chr15 52823647 52823796 -50671178 - L2a LINE L2 0 3426 3283 4 988 346 331 48 48 chr15 52824167 52824335 -50670639 - MIRb SINE MIR -8 260 93 4 988 300 316 0 197 chr15 52824514 52824656 -50670318 + PB1D10 SINE Alu 3 116 -1 4 988 301 328 47 0 chr15 52824849 52824977 -50669997 + Helitron3Na_Mam RC Helitron 289 422 -64 4 988 397 206 48 12 chr15 52825211 52825308 -50669666 - PB1D10 SINE Alu -1 119 11 4 988 415 291 196 0 chr15 52825312 52825460 -50669514 + MER20 DNA MER1_type 8 184 -35 4 988 856 242 0 34 chr15 52827200 52827405 -50667569 - B3A SINE B2 0 198 1 4 988 228 35 0 0 chr15 52827641 52827670 -50667304 + (TC)n Simple_repeat Simple_repeat 1 29 0 4 988 336 266 8 96 chr15 52827685 52827810 -50667164 - PB1D10 SINE Alu -3 114 1 4 988 829 227 123 32 chr15 52827813 52828154 -50666820 - L1MB8 LINE L1 -5 6173 5802 4 988 306 282 111 0 chr15 52828183 52828307 -50666667 - MIR SINE MIR -93 175 30 4 988 269 363 47 82 chr15 52829958 52830129 -50664845 + MLT1G1 LTR MaLR 223 387 -192 4 988 573 15 0 0 chr15 52830248 52830314 -50664660 + (TC)n Simple_repeat Simple_repeat 1 66 0 4 988 2080 137 19 0 chr15 52833944 52834265 -50660709 + ORR1A2 LTR MaLR 1 327 0 4 988 191 293 17 17 chr15 52834284 52834343 -50660631 + MIR SINE MIR 86 144 -64 4 988 3997 79 43 2 chr15 52834920 52835430 -50659544 - L1_Mus4 LINE L1 -4 6632 6102 4 988 4109 146 109 25 chr15 52835529 52836209 -50658765 - RMER19A LTR ERVK 0 737 1 4 988 225 308 81 49 chr15 52836549 52836672 -50658302 + MLT1L LTR MaLR 255 381 -229 4 988 347 316 95 60 chr15 52837479 52837711 -50657263 - MT2A LTR ERVL -4 529 290 4 988 257 241 17 0 chr15 52837860 52837918 -50657056 - MTEa LTR MaLR -320 59 1 4 988 431 59 76 8 chr15 52837991 52838110 -50656864 + (TA)n Simple_repeat Simple_repeat 1 127 0 4 988 3422 286 55 55 chr15 52838285 52838921 -50656053 - Lx8 LINE L1 -9 7464 6798 4 988 1165 180 52 5 chr15 52838921 52839133 -50655841 + URR1A DNA MER1_type 5 226 0 4 988 3422 286 55 55 chr15 52839133 52839775 -50655199 - Lx8 LINE L1 -676 6797 6187 4 988 551 317 72 55 chr15 52840132 52840408 -50654566 + ORR1E LTR MaLR 3 282 -102 4 988 657 0 0 0 chr15 52840415 52840488 -50654486 + (GTTTG)n Simple_repeat Simple_repeat 2 74 0 4 988 1181 70 7 7 chr15 52840488 52840625 -50654349 - B1_Mus1 SINE Alu -9 139 2 4 988 348 315 74 57 chr15 52840625 52840659 -50654315 + ORR1E LTR MaLR 283 317 -67 4 988 228 308 56 61 chr15 52841551 52841731 -50653243 - MIR3 SINE MIR -56 206 28 4 988 180 372 69 15 chr15 52842366 52842497 -50652477 + MIRb SINE MIR 92 229 -39 4 988 720 89 0 0 chr15 52842642 52842743 -50652231 + (GAAA)n Simple_repeat Simple_repeat 4 104 0 4 988 240 67 0 0 chr15 52842752 52842793 -50652181 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 988 965 158 6 0 chr15 52842793 52842970 -50652004 + GA-rich Low_complexity Low_complexity 3 180 0 4 988 282 346 129 42 chr15 52843489 52843706 -50651268 + MIRb SINE MIR 25 260 -8 4 988 231 341 47 0 chr15 52843826 52843911 -50651063 - MIRb SINE MIR -162 106 18 4 988 304 284 101 16 chr15 52844929 52845058 -50649916 + L1MEg LINE L1 1830 1969 -4115 4 988 605 304 339 3 chr15 52845418 52845731 -50649243 + MER47B DNA MER2_type 1 418 0 4 988 240 35 0 0 chr15 52847436 52847465 -50647509 + (AAATG)n Simple_repeat Simple_repeat 2 30 0 4 988 385 345 27 14 chr15 52848751 52848898 -50646076 - B1F2 SINE Alu 0 149 1 4 988 294 29 0 0 chr15 52848909 52848944 -50646030 + (TTTTA)n Simple_repeat Simple_repeat 5 39 0 4 988 817 242 74 21 chr15 52848944 52849134 -50645840 - B3 SINE B2 -16 200 1 4 988 2383 290 144 62 chr15 52849232 52850017 -50644957 - Lx8 LINE L1 -21 7452 6622 5 988 887 148 7 34 chr15 52850017 52850164 -50644810 + B1_Mur3 SINE Alu 1 143 -6 5 988 2383 290 144 62 chr15 52850164 52850602 -50644372 - Lx8 LINE L1 -852 6621 6129 5 988 477 122 0 0 chr15 52851663 52851737 -50643237 + (TTTC)n Simple_repeat Simple_repeat 3 76 0 5 988 180 380 119 9 chr15 52853591 52853700 -50641274 - MIRb SINE MIR -126 142 22 5 988 229 376 191 0 chr15 52854138 52854300 -50640674 - MLT1G1 LTR MaLR -290 289 97 5 988 265 304 201 16 chr15 52854402 52854596 -50640378 - MLT1G1-int LTR MaLR -23 1466 1237 5 988 183 314 28 14 chr15 52854596 52854667 -50640307 - MIRb SINE MIR -15 253 182 5 988 4342 120 3 39 chr15 52854729 52855352 -50639622 + MT2B LTR ERVL 1 601 0 5 988 456 271 50 37 chr15 52855451 52855612 -50639362 + Charlie1a DNA MER1_type 1 163 -1292 5 988 1963 184 7 124 chr15 52855652 52855854 -50639120 - ORR1C2 LTR MaLR 0 384 207 5 988 2127 118 70 0 chr15 52855854 52856183 -50638791 - Lx2A1 LINE L1 -8 7000 6649 5 988 1963 184 7 124 chr15 52856183 52856245 -50638729 - ORR1C2 LTR MaLR -178 206 172 5 988 369 0 0 0 chr15 52856245 52856286 -50638688 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 988 405 0 0 0 chr15 52856286 52856330 -50638644 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 988 1963 184 7 124 chr15 52856330 52856498 -50638476 - ORR1C2 LTR MaLR -213 171 2 5 988 399 297 98 67 chr15 52856642 52857089 -50637885 + L1MC4 LINE L1 7064 7524 -518 5 988 2137 171 42 3 chr15 52857280 52857660 -50637314 - MTC LTR MaLR -26 395 1 5 988 307 308 86 0 chr15 52857665 52857782 -50637192 + Charlie1a DNA MER1_type 1036 1162 -293 5 988 588 147 20 0 chr15 52857815 52857917 -50637057 + Lx3C LINE L1 6865 6968 -8 5 988 231 152 22 0 chr15 52857920 52857966 -50637008 + A-rich Low_complexity Low_complexity 1 47 0 5 988 22 35 0 0 chr15 52858044 52858073 -50636901 + AT_rich Low_complexity Low_complexity 1 29 0 5 988 1759 241 125 103 chr15 52858169 52859001 -50635973 + RMER17B LTR ERVK 30 879 -79 5 988 492 18 0 0 chr15 52859027 52859084 -50635890 + (TC)n Simple_repeat Simple_repeat 1 57 0 5 988 387 0 0 0 chr15 52859084 52859126 -50635848 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 988 2759 323 55 14 chr15 52859131 52860195 -50634779 - Lx8 LINE L1 -156 7317 6211 5 988 181 368 63 16 chr15 52860712 52860839 -50634135 + MIRb SINE MIR 127 259 -9 5 988 308 319 59 50 chr15 52861310 52861399 -50633575 + PB1D7 SINE Alu 1 94 -26 5 988 3495 48 2 5 chr15 52861399 52861796 -50633178 + MTA_Mm LTR MaLR 1 396 0 5 988 308 319 59 50 chr15 52861796 52861825 -50633149 + PB1D7 SINE Alu 95 120 0 5 988 961 279 97 15 chr15 52861885 52862216 -50632758 + MLT1B LTR MaLR 27 384 -6 5 988 203 291 0 0 chr15 52862234 52862289 -50632685 + L2a LINE L2 3367 3421 -5 5 988 236 294 10 80 chr15 52863129 52863229 -50631745 - MLT1L LTR MaLR -344 266 174 5 988 440 317 169 35 chr15 52864162 52864476 -50630498 - ORR1E LTR MaLR -2 357 2 5 988 237 301 49 74 chr15 52865389 52865511 -50629463 + PB1 SINE Alu 1 119 -8 5 988 247 392 64 6 chr15 52865619 52865791 -50629183 - L2a LINE L2 -251 3175 2994 5 988 563 310 112 42 chr15 52865934 52866382 -50628592 - L1MEg LINE L1 -4602 1482 1004 5 988 183 100 0 0 chr15 52866414 52866444 -50628530 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 5 988 1206 61 7 0 chr15 52866445 52866592 -50628382 - B1_Mus1 SINE Alu 0 148 1 5 988 255 103 0 0 chr15 52867770 52867809 -50627165 + (CATA)n Simple_repeat Simple_repeat 2 40 0 5 988 780 194 36 7 chr15 52868767 52868907 -50626067 + B1_Mur4 SINE Alu 1 144 -6 5 988 203 133 22 0 chr15 52868916 52868961 -50626013 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 5 988 345 47 0 0 chr15 52868961 52869004 -50625970 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 5 988 293 207 12 0 chr15 52869086 52869168 -50625806 + (ATG)n Simple_repeat Simple_repeat 2 84 0 5 988 378 310 35 8 chr15 52869356 52869501 -50625473 + MLT1A1 LTR MaLR 1 159 -249 5 988 1305 34 0 0 chr15 52869512 52869659 -50625315 + B1_Mus2 SINE Alu 1 147 0 5 988 984 268 56 28 chr15 52869679 52869963 -50625011 - Lx9 LINE L1 -696 6948 6657 5 988 1796 232 109 36 chr15 52869964 52870449 -50624525 + Lx9 LINE L1 6993 7511 -133 5 988 498 79 22 11 chr15 52870449 52870539 -50624435 + (TG)n Simple_repeat Simple_repeat 2 92 0 5 988 1796 232 109 36 chr15 52870539 52870660 -50624314 + Lx9 LINE L1 7512 7642 -2 5 988 1259 62 0 0 chr15 52870665 52870811 -50624163 + B1_Mus2 SINE Alu 2 147 0 5 988 210 24 0 87 chr15 52870814 52870860 -50624114 + (TAAAAA)n Simple_repeat Simple_repeat 1 42 0 5 988 22 0 0 0 chr15 52870860 52870882 -50624092 + AT_rich Low_complexity Low_complexity 1 22 0 5 988 3329 19 0 39 chr15 52870892 52871274 -50623700 + IAPLTR1_Mm LTR ERVK 1 367 0 5 988 4778 64 46 16 chr15 52871274 52871910 -50623064 + IAPEz-int LTR ERVK 8 662 -5819 5 988 446 66 0 32 chr15 52871910 52871973 -50623001 + IAPEz-int LTR ERVK 1359 1419 -5062 5 988 1798 123 4 15 chr15 52871962 52872227 -50622747 + IAPEz-int LTR ERVK 2236 2497 -5183 5 988 937 88 24 0 chr15 52872222 52872347 -50622627 + IAPEz-int LTR ERVK 4783 4910 -2770 5 988 26651 19 2 2 chr15 52872347 52875305 -50619669 + IAPEz-int LTR ERVK 3525 6481 0 5 988 3329 19 0 39 chr15 52875305 52875687 -50619287 + IAPLTR1_Mm LTR ERVK 1 367 0 5 988 1815 169 64 39 chr15 52876437 52876825 -50618149 - MTB_Mm LTR MaLR 0 407 10 5 988 1610 298 40 32 chr15 52877096 52877320 -50617654 + Lx8 LINE L1 6189 6425 -1048 5 988 3221 26 0 0 chr15 52877320 52877665 -50617309 - ORR1A0 LTR MaLR -1 345 1 5 988 1610 298 40 32 chr15 52877665 52877995 -50616979 + Lx8 LINE L1 6426 6747 -726 5 988 530 258 146 0 chr15 52878032 52878183 -50616791 + Lx8 LINE L1 6935 7107 -366 5 988 3411 80 4 0 chr15 52878179 52878631 -50616343 + L1_Mus1 LINE L1 5199 5652 -231 5 988 6478 67 3 0 chr15 52878631 52879394 -50615580 + L1_Mus1 LINE L1 5803 6567 0 5 988 955 280 13 45 chr15 52879418 52879596 -50615378 + Lx8 LINE L1 7168 7344 -129 5 988 1317 27 0 33 chr15 52879596 52879741 -50615233 + B1_Mus1 SINE Alu 1 141 -7 5 988 279 0 0 0 chr15 52879741 52879772 -50615202 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 988 955 280 13 45 chr15 52879779 52879914 -50615060 + Lx8 LINE L1 7345 7471 -2 5 988 536 235 92 64 chr15 52880831 52880972 -50614002 + ID_B1 SINE B4 72 216 -8 5 988 1096 219 5 18 chr15 52881053 52881272 -50613702 - B3 SINE B2 0 216 1 5 988 918 211 148 74 chr15 52882111 52882382 -50612592 + B4 SINE B4 2 292 0 5 988 328 332 130 9 chr15 52882395 52882611 -50612363 - L1ME3 LINE L1 -2 6160 5919 5 988 597 130 0 11 chr15 52882680 52882773 -50612201 + MTC LTR MaLR 1 92 -329 5 988 275 191 0 0 chr15 52882774 52882821 -50612153 + MTC LTR MaLR 375 421 0 5 988 692 219 88 0 chr15 52882821 52882981 -50611993 + MTC-int LTR MaLR 1 174 -1084 5 988 2955 241 61 39 chr15 52882965 52883674 -50611300 + MTC-int LTR MaLR 364 1086 -172 5 988 3864 176 53 11 chr15 52883674 52884335 -50610639 - Lx4B LINE L1 -12 7046 6358 5 988 2955 241 61 39 chr15 52884335 52884499 -50610475 + MTC-int LTR MaLR 1087 1255 -3 5 988 246 235 6 24 chr15 52884499 52884575 -50610399 + MTC LTR MaLR 23 96 -325 5 988 434 228 0 0 chr15 52884579 52884658 -50610316 + Lx6 LINE L1 7008 7086 -374 5 988 242 132 0 19 chr15 52884712 52884766 -50610208 + (TCTG)n Simple_repeat Simple_repeat 2 54 0 5 988 602 241 0 6 chr15 52885196 52885363 -50609611 + GA-rich Low_complexity Low_complexity 4 169 0 5 988 459 305 184 58 chr15 52885485 52885899 -50609075 - L1MEf LINE L1 -2358 3788 3323 5 988 486 0 0 0 chr15 52886078 52886132 -50608842 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 988 468 48 0 0 chr15 52886132 52886194 -50608780 + (GA)n Simple_repeat Simple_repeat 2 64 0 5 988 231 36 0 0 chr15 52886194 52886222 -50608752 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 5 988 270 301 49 18 chr15 52886422 52886595 -50608379 - L1MEf LINE L1 -4956 1286 1075 5 988 528 286 25 118 chr15 52886610 52886931 -50608043 - L1_Rod LINE L1 -2104 3743 3453 5 988 3756 214 18 10 chr15 52887002 52887723 -50607251 - Lx5 LINE L1 -3 7047 6321 5 988 1979 269 88 20 chr15 52887785 52888587 -50606387 - L1_Rod LINE L1 -2680 3463 2593 5 988 806 253 196 20 chr15 52889078 52889384 -50605590 - ORR1D1 LTR MaLR -14 360 1 5 988 49 0 0 0 chr15 52889412 52889461 -50605513 + AT_rich Low_complexity Low_complexity 1 49 0 5 988 7563 99 26 1 chr15 52889518 52890984 -50603990 - Lx LINE L1 0 6654 5144 5 988 1087 99 66 6 chr15 52890976 52891158 -50603816 - MusHAL1 LINE L1 -458 2254 2062 5 988 1603 70 0 0 chr15 52891249 52891448 -50603526 - L1_Mus2 LINE L1 0 6566 6368 5 988 21 0 0 0 chr15 52891461 52891482 -50603492 + AT_rich Low_complexity Low_complexity 1 21 0 5 988 329 0 24 0 chr15 52891510 52891551 -50603423 + (TC)n Simple_repeat Simple_repeat 2 43 0 5 988 1660 329 78 20 chr15 52891564 52892430 -50602544 - Lx8 LINE L1 -152 7321 6405 5 988 228 134 70 30 chr15 52892948 52893048 -50601926 + (TATAA)n Simple_repeat Simple_repeat 1 104 0 5 988 187 350 93 79 chr15 52893761 52893975 -50600999 - MIR SINE MIR -38 224 8 5 988 1288 90 39 6 chr15 52894015 52894194 -50600780 + B2_Mm2 SINE B2 2 186 -9 5 988 416 139 13 0 chr15 52894777 52894856 -50600118 + (CATA)n Simple_repeat Simple_repeat 3 82 0 5 988 264 176 0 0 chr15 52900037 52900105 -50594869 + T-rich Low_complexity Low_complexity 1 68 0 5 988 674 295 5 55 chr15 52900823 52901024 -50593950 - B3A SINE B2 -5 193 3 5 988 440 240 93 49 chr15 52901510 52901672 -50593302 + RMER1C Other Other 1080 1248 -94 5 988 956 173 32 73 chr15 52902137 52902355 -50592619 + URR1B DNA MER1_type 17 225 0 5 988 226 250 103 77 chr15 52903233 52903350 -50591624 - PB1D7 SINE Alu 0 120 1 5 988 309 51 0 0 chr15 52903444 52903483 -50591491 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 5 988 228 143 0 0 chr15 52903483 52903525 -50591449 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 988 521 319 29 14 chr15 52903568 52903708 -50591266 - RSINE1 SINE B4 -17 148 7 5 988 488 310 87 19 chr15 52903754 52903915 -50591059 - ID_B1 SINE B4 -4 220 49 5 988 182 330 65 21 chr15 52904095 52904188 -50590786 - MIR3 SINE MIR -52 156 60 5 988 454 357 7 0 chr15 52904497 52904637 -50590337 + MLT1A LTR MaLR 222 362 -12 5 988 400 239 49 103 chr15 52905126 52905343 -50589631 - MIR SINE MIR 0 268 62 5 988 1797 192 30 12 chr15 52905388 52905726 -50589248 + MTEb LTR MaLR 35 378 -1 5 988 206 335 83 13 chr15 52906254 52906411 -50588563 + L2a LINE L2 2631 2798 -621 5 988 309 330 10 0 chr15 52906759 52906862 -50588112 + L2a LINE L2 3286 3389 -37 5 988 1671 32 27 0 chr15 52907106 52907293 -50587681 + B2_Mm1a SINE B2 2 193 0 5 988 29 28 0 0 chr15 52908292 52908328 -50586646 + AT_rich Low_complexity Low_complexity 1 36 0 5 988 291 273 156 31 chr15 52908347 52908562 -50586412 - MIRb SINE MIR -21 241 14 5 988 2270 128 54 14 chr15 52908585 52908956 -50586018 + MTB_Mm LTR MaLR 22 407 0 5 988 324 325 86 64 chr15 52909319 52909645 -50585329 + L1MB5 LINE L1 5824 6156 -18 5 988 328 303 74 26 chr15 52909706 52909896 -50585078 - MER113A DNA MER1_type -38 276 78 5 988 311 345 18 0 chr15 52910055 52910151 -50584823 - RSINE1 SINE B4 -19 146 49 6 988 763 152 0 23 chr15 52910151 52910279 -50584695 + B1_Mus1 SINE Alu 1 125 -23 6 988 21 0 0 0 chr15 52910354 52910375 -50584599 + AT_rich Low_complexity Low_complexity 1 21 0 6 988 229 352 37 0 chr15 52910532 52910640 -50584334 + MLT2B1 LTR ERVL 5 116 -399 6 988 326 283 0 124 chr15 52910852 52910981 -50583993 - B4 SINE B4 -109 183 71 6 988 345 327 89 66 chr15 52911029 52911261 -50583713 + MLT2B1 LTR ERVL 247 539 -15 6 988 257 51 26 0 chr15 52911909 52911948 -50583026 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 988 603 339 61 67 chr15 52912432 52912792 -50582182 + MTEa LTR MaLR 1 358 -21 6 988 273 300 0 0 chr15 52913201 52913271 -50581703 + L2b LINE L2 3303 3372 -3 6 988 222 118 0 0 chr15 52913726 52913760 -50581214 + (A)n Simple_repeat Simple_repeat 1 34 0 6 988 376 117 0 25 chr15 52914045 52914124 -50580850 + (TG)n Simple_repeat Simple_repeat 2 78 0 6 988 273 29 0 0 chr15 52914126 52914160 -50580814 + (GA)n Simple_repeat Simple_repeat 1 34 0 6 988 5792 59 1 1 chr15 52915390 52916101 -50578873 + L1_Mus1 LINE L1 5880 6567 0 6 988 273 29 0 0 chr15 52916963 52916997 -50577977 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 988 215 264 14 14 chr15 52917353 52917426 -50577548 + CT-rich Low_complexity Low_complexity 2 74 0 6 988 193 314 76 29 chr15 52917753 52917858 -50577116 - MIR SINE MIR -71 191 82 6 988 252 265 44 0 chr15 52919305 52919373 -50575601 - MIR SINE MIR -68 194 124 6 988 477 292 166 40 chr15 52919915 52920168 -50574806 + B4A SINE B4 2 286 -6 6 988 459 145 0 0 chr15 52920205 52920288 -50574686 + (CATA)n Simple_repeat Simple_repeat 4 86 0 6 988 1018 259 60 22 chr15 52920864 52921132 -50573842 + B4 SINE B4 1 278 -14 6 988 207 0 0 0 chr15 52921858 52921881 -50573093 + (T)n Simple_repeat Simple_repeat 1 23 0 6 988 207 280 0 0 chr15 52923544 52923594 -50571380 + (CATA)n Simple_repeat Simple_repeat 2 51 0 6 988 540 45 0 0 chr15 52926090 52926157 -50568817 + (TCCC)n Simple_repeat Simple_repeat 4 70 0 6 988 885 190 7 0 chr15 52926157 52926294 -50568680 - B1_Mur4 SINE Alu -12 138 1 6 988 513 0 0 0 chr15 52926526 52926583 -50568391 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 988 627 60 0 0 chr15 52926583 52926666 -50568308 + (GGGAGA)n Simple_repeat Simple_repeat 6 89 0 6 988 1070 285 84 27 chr15 52927386 52927721 -50567253 + ORR1E LTR MaLR 1 354 -5 6 988 641 198 23 16 chr15 52928822 52928950 -50566024 + B3 SINE B2 83 211 -5 6 988 398 319 8 16 chr15 52929642 52929763 -50565211 - Tigger5 DNA MER2_type -1 2405 2286 6 988 585 253 20 33 chr15 52929785 52929936 -50565038 - Tigger5 DNA MER2_type -2211 195 47 6 988 529 315 33 11 chr15 52930521 52930704 -50564270 - B4A SINE B4 -79 213 27 6 988 21 36 0 0 chr15 52931915 52931943 -50563031 + AT_rich Low_complexity Low_complexity 1 28 0 6 988 318 26 0 0 chr15 52932581 52932620 -50562354 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 988 222 118 0 0 chr15 52933724 52933758 -50561216 + (TCC)n Simple_repeat Simple_repeat 2 35 0 6 988 291 28 0 0 chr15 52933851 52933887 -50561087 + (CCAA)n Simple_repeat Simple_repeat 2 37 0 6 988 180 340 0 0 chr15 52934322 52934369 -50560605 + MIRb SINE MIR 63 109 -159 6 988 814 159 257 29 chr15 52936361 52936536 -50558438 + B3 SINE B2 2 216 0 6 988 333 109 0 0 chr15 52938544 52938599 -50556375 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 6 988 180 0 0 0 chr15 52938930 52938950 -50556024 + (T)n Simple_repeat Simple_repeat 1 20 0 6 988 1323 27 0 0 chr15 52939374 52939521 -50555453 + B1_Mm SINE Alu 1 147 0 6 988 240 100 0 0 chr15 52939541 52939581 -50555393 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 6 988 517 256 22 52 chr15 52939666 52939802 -50555172 - B1_Mur1 SINE Alu -17 132 1 6 988 189 74 0 0 chr15 52940992 52941019 -50553955 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 988 1296 209 142 27 chr15 52941834 52942164 -50552810 + ORR1D1 LTR MaLR 5 372 -2 6 988 778 197 29 0 chr15 52942511 52942648 -50552326 + B1_Mur4 SINE Alu 1 141 -9 6 988 315 0 0 0 chr15 52942649 52942684 -50552290 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 988 315 0 0 0 chr15 52942875 52942910 -50552064 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 988 420 291 47 56 chr15 52943034 52943110 -50551864 + L1MD3 LINE L1 5190 5258 -888 6 988 954 164 219 0 chr15 52943110 52943293 -50551681 - URR1A DNA MER1_type -3 223 1 6 988 887 303 42 50 chr15 52943293 52943736 -50551238 + L1MD3 LINE L1 5259 5698 -480 6 988 227 345 9 0 chr15 52943892 52944005 -50550969 + L1MD3 LINE L1 5883 5996 -1999 6 988 315 0 0 0 chr15 52944112 52944147 -50550827 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 988 218 268 105 18 chr15 52944524 52944638 -50550336 + MER5A DNA MER1_type 13 136 -53 6 988 248 323 39 39 chr15 52944700 52944829 -50550145 + MIRb SINE MIR 29 157 -111 6 988 1151 62 0 14 chr15 52944878 52945026 -50549948 - B1_Mus2 SINE Alu -1 146 1 6 988 184 250 125 0 chr15 52945228 52945300 -50549674 + MIRc SINE MIR 184 264 -4 6 988 304 227 15 0 chr15 52947648 52947714 -50547260 + B4A SINE B4 80 146 -146 6 988 599 184 0 27 chr15 52947660 52947772 -50547202 + PB1D9 SINE Alu 8 116 -4 6 988 823 185 125 33 chr15 52949067 52949251 -50545723 + B3 SINE B2 2 202 -14 6 988 989 62 0 0 chr15 52950060 52950189 -50544785 + B1_Mus1 SINE Alu 11 139 -9 6 988 246 32 0 0 chr15 52950189 52950220 -50544754 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 988 358 318 31 72 chr15 52950603 52950796 -50544178 + ORR1E LTR MaLR 54 238 -121 6 988 214 359 80 51 chr15 52950902 52951040 -50543934 + B3 SINE B2 72 213 -3 6 988 192 77 0 0 chr15 52951844 52951870 -50543104 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 988 184 356 19 19 chr15 52952328 52952431 -50542543 + MIRc SINE MIR 130 232 -36 6 989 362 212 25 17 chr15 52953682 52953802 -50541172 + A-rich Low_complexity Low_complexity 3 123 0 6 989 1686 42 0 0 chr15 52953958 52954151 -50540823 + B2_Mm1a SINE B2 1 193 0 6 989 295 212 4 0 chr15 52955140 52955209 -50539765 - PB1D10 SINE Alu -57 92 21 6 989 1224 157 8 78 chr15 52955350 52955592 -50539382 - URR1B DNA MER1_type 0 225 1 6 989 1121 50 7 0 chr15 52956061 52956200 -50538774 + B1_Mus1 SINE Alu 1 140 -8 6 989 194 0 39 0 chr15 52956200 52956226 -50538748 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 989 336 232 62 10 chr15 52958371 52958467 -50536507 + PB1D10 SINE Alu 8 108 -9 6 989 313 333 22 0 chr15 52959014 52959149 -50535825 + Charlie8 DNA MER1_type 88 225 -2203 6 989 414 0 0 0 chr15 52961164 52961210 -50533764 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 989 195 250 0 40 chr15 52961325 52961375 -50533599 - MIRm SINE MIR -129 147 100 6 989 678 257 50 41 chr15 52962137 52962356 -50532618 + ID_B1 SINE B4 2 222 -2 6 989 407 333 6 68 chr15 52962585 52962746 -50532228 + RSINE1 SINE B4 15 165 0 6 989 25 51 0 0 chr15 52963580 52963619 -50531355 + AT_rich Low_complexity Low_complexity 1 39 0 6 989 413 315 89 30 chr15 52964393 52964596 -50530378 - LFSINE_Vert SINE SINE -198 261 47 6 989 487 126 61 12 chr15 52966283 52966617 -50528357 + (TCTA)n Simple_repeat Simple_repeat 1 350 0 6 989 25 0 0 0 chr15 52967831 52967856 -50527118 + AT_rich Low_complexity Low_complexity 1 25 0 6 989 24 0 0 0 chr15 52968099 52968123 -50526851 + AT_rich Low_complexity Low_complexity 1 24 0 6 989 281 287 46 0 chr15 52968433 52968520 -50526454 - PB1D7 SINE Alu -2 118 28 6 989 286 288 105 42 chr15 52968910 52969149 -50525825 - L2c LINE L2 -55 3332 3079 6 989 372 257 58 71 chr15 52969401 52969556 -50525418 - B3 SINE B2 0 216 64 6 989 1705 31 0 0 chr15 52969617 52969810 -50525164 - B2_Mm1a SINE B2 0 193 1 6 989 311 300 78 70 chr15 52969863 52969893 -50525081 + B1F SINE Alu 1 126 -19 6 989 360 255 63 11 chr15 52969893 52969988 -50524986 + ID_B1 SINE B4 104 203 -21 6 989 276 267 10 82 chr15 52972286 52972384 -50522590 + PB1D10 SINE Alu 1 91 -26 6 989 21 36 0 0 chr15 52972418 52972446 -50522528 + AT_rich Low_complexity Low_complexity 1 28 0 6 989 397 258 0 82 chr15 52972449 52972559 -50522415 - RSINE1 SINE B4 0 165 65 6 989 190 116 23 23 chr15 52972676 52972720 -50522254 + CT-rich Low_complexity Low_complexity 2 45 0 6 989 282 345 65 65 chr15 52972793 52972917 -50522057 + PB1 SINE Alu 1 124 -3 6 989 1122 219 17 34 chr15 52973805 52974102 -50520872 - B4 SINE B4 0 292 1 6 989 359 296 64 23 chr15 52974303 52974476 -50520498 + MER58A DNA MER1_type 42 221 -3 6 989 1000 73 7 29 chr15 52975001 52975141 -50519833 + B1_Mus2 SINE Alu 2 138 -9 6 989 275 26 0 49 chr15 52975141 52975182 -50519792 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 6 989 1755 204 37 42 chr15 52975736 52976145 -50518829 + MTD LTR MaLR 5 411 -8 6 989 23 0 0 0 chr15 52977814 52977837 -50517137 + AT_rich Low_complexity Low_complexity 1 23 0 6 989 264 250 146 11 chr15 52980730 52980819 -50514155 + MLT1J LTR MaLR 193 293 -219 6 989 383 286 84 21 chr15 52981026 52981169 -50513805 - RSINE1 SINE B4 0 165 14 6 989 405 0 0 0 chr15 52981838 52981883 -50513091 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 989 1075 102 7 0 chr15 52982278 52982425 -50512549 + B1_Mus1 SINE Alu 1 148 0 6 989 689 188 0 0 chr15 52982472 52982584 -50512390 - PB1D9 SINE Alu -6 114 3 6 989 189 107 0 0 chr15 52982967 52982995 -50511979 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 989 234 0 0 0 chr15 52983481 52983507 -50511467 + (A)n Simple_repeat Simple_repeat 1 26 0 7 989 874 76 8 15 chr15 52986536 52986669 -50508305 + (GGAA)n Simple_repeat Simple_repeat 1 132 0 7 989 26 30 0 0 chr15 52987968 52988001 -50506973 + AT_rich Low_complexity Low_complexity 1 33 0 7 989 26 0 0 0 chr15 52988120 52988146 -50506828 + AT_rich Low_complexity Low_complexity 1 26 0 7 989 453 215 0 0 chr15 52988155 52988234 -50506740 - ID4_ SINE ID -3 80 2 7 989 25 0 0 0 chr15 52989639 52989664 -50505310 + AT_rich Low_complexity Low_complexity 1 25 0 7 989 267 54 0 0 chr15 52990120 52990157 -50504817 + (TTGG)n Simple_repeat Simple_repeat 2 38 0 7 989 227 29 0 54 chr15 52992027 52992064 -50502910 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 7 989 527 214 54 0 chr15 52992188 52992300 -50502674 - PB1D9 SINE Alu -1 119 2 7 989 770 170 89 0 chr15 52993161 52993296 -50501678 + B1_Mus2 SINE Alu 1 147 0 7 989 778 206 6 33 chr15 52993306 52993487 -50501487 + B2_Mm2 SINE B2 1 176 -19 7 989 324 0 0 0 chr15 52993527 52993563 -50501411 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 989 186 266 53 16 chr15 52993920 52994008 -50500966 + MIRc SINE MIR 101 199 -77 7 989 326 93 0 0 chr15 52994515 52994569 -50500405 + Lx4A LINE L1 7005 7058 0 7 989 282 301 88 0 chr15 52994985 52995121 -50499853 - MER117 DNA MER1_type -47 150 3 7 989 1509 260 41 16 chr15 52996091 52996579 -50498395 + RMER5 LTR ERV1 35 534 0 7 989 204 40 0 0 chr15 52997001 52997026 -50497948 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 7 989 200 327 101 64 chr15 52998616 52998835 -50496139 - L2 LINE L2 -355 3064 2838 7 989 720 181 45 8 chr15 52999350 52999484 -50495490 + B1_Mus1 SINE Alu 1 139 -9 7 989 252 0 0 0 chr15 52999484 52999512 -50495462 + (CAA)n Simple_repeat Simple_repeat 2 29 0 7 989 527 189 63 0 chr15 53001072 53001183 -50493791 + B1F SINE Alu 12 129 -20 1 989 288 0 0 0 chr15 53001393 53001425 -50493549 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 989 504 0 0 0 chr15 53001527 53001583 -50493391 + (GGGA)n Simple_repeat Simple_repeat 2 57 0 3 989 249 298 105 24 chr15 53002919 53003043 -50491931 - MIRc SINE MIR -27 241 108 4 989 441 0 0 0 chr15 53004244 53004293 -50490681 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 989 1241 192 140 59 chr15 53005283 53005675 -50489299 + RLTR20B3 LTR ERVK 47 470 -107 6 989 414 0 0 0 chr15 53005675 53005721 -50489253 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 989 244 254 86 122 chr15 53005879 53006018 -50488956 + MLT1A1 LTR MaLR 1 134 -274 8 989 30 27 0 0 chr15 53007548 53007585 -50487389 + AT_rich Low_complexity Low_complexity 1 37 0 9 989 315 333 11 11 chr15 53007624 53007715 -50487259 - RSINE1 SINE B4 -19 146 56 1 989 295 350 26 0 chr15 53009019 53009136 -50485838 + MIRc SINE MIR 142 261 -7 1 989 286 42 0 40 chr15 53010199 53010249 -50484725 + (GTTTG)n Simple_repeat Simple_repeat 2 49 0 1 989 691 114 0 0 chr15 53010249 53010349 -50484625 - B1_Mus2 SINE Alu -4 143 44 1 989 353 117 0 0 chr15 53010399 53010459 -50484515 - B1_Mus1 SINE Alu -88 60 1 1 989 270 73 0 0 chr15 53010859 53010900 -50484074 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 989 313 293 0 0 chr15 53011338 53011413 -50483561 - B4A SINE B4 -213 79 5 1 989 298 262 129 41 chr15 53011819 53011966 -50483008 + ID_B1 SINE B4 58 217 -7 1 989 758 117 0 40 chr15 53011966 53012117 -50482857 + G-rich Low_complexity Low_complexity 1 145 0 1 989 216 158 0 0 chr15 53014064 53014102 -50480872 + CT-rich Low_complexity Low_complexity 4 41 0 1 989 1142 83 0 0 chr15 53014382 53014539 -50480435 + B2_Mm2 SINE B2 1 157 -38 2 989 201 74 0 0 chr15 53014541 53014568 -50480406 + (GGAA)n Simple_repeat Simple_repeat 3 29 0 2 989 192 163 0 0 chr15 53014619 53014662 -50480312 + (CATA)n Simple_repeat Simple_repeat 2 44 0 2 989 246 342 48 48 chr15 53015812 53015938 -50479036 + MER45A DNA Tip100 52 177 -1 2 989 315 0 0 0 chr15 53017602 53017637 -50477337 + (TA)n Simple_repeat Simple_repeat 1 35 0 2 989 324 0 0 0 chr15 53017637 53017672 -50477302 + (GA)n Simple_repeat Simple_repeat 2 37 0 2 989 180 0 0 0 chr15 53019505 53019525 -50475449 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2 989 563 62 0 12 chr15 53019763 53019844 -50475130 + (TCCC)n Simple_repeat Simple_repeat 2 81 0 2 989 1947 162 40 66 chr15 53020620 53021044 -50473930 - MTC LTR MaLR -8 413 1 2 989 221 0 35 0 chr15 53021111 53021140 -50473834 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2 989 238 26 51 0 chr15 53021237 53021276 -50473698 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 3 989 488 289 112 1 chr15 53021526 53021672 -50473302 + B3A SINE B2 8 169 -47 3 989 261 0 0 0 chr15 53021672 53021701 -50473273 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 989 334 296 91 45 chr15 53021701 53021752 -50473222 + B3 SINE B2 170 214 -2 3 989 775 222 19 87 chr15 53022015 53022222 -50472752 - B3A SINE B2 -5 193 1 3 989 252 341 97 15 chr15 53022514 53022648 -50472326 - MIRb SINE MIR -84 184 40 3 989 297 0 0 0 chr15 53024460 53024493 -50470481 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 989 765 144 38 0 chr15 53025553 53025685 -50469289 + B1_Mur2 SINE Alu 12 148 -1 3 989 486 228 0 134 chr15 53027208 53027350 -50467624 - B1_Mur2 SINE Alu -26 123 1 3 989 281 197 68 27 chr15 53027288 53027361 -50467613 - B4 SINE B4 -147 145 70 3 989 240 266 38 0 chr15 53029381 53029460 -50465514 + (TG)n Simple_repeat Simple_repeat 1 82 0 3 989 540 299 7 0 chr15 53029485 53029622 -50465352 - RSINE1 SINE B4 -25 140 3 4 989 401 231 43 11 chr15 53030491 53030583 -50464391 + RSINE1 SINE B4 2 96 -69 4 989 285 204 114 47 chr15 53030609 53030758 -50464216 + RMER17A LTR ERVK 311 469 -282 4 989 1416 190 26 38 chr15 53032137 53032481 -50462493 + RLTR15 LTR ERVK 1 340 -19 4 989 473 311 8 0 chr15 53033044 53033166 -50461808 + ID_B1 SINE B4 5 127 -97 4 989 233 304 14 0 chr15 53033259 53033328 -50461646 + ID4_ SINE ID 2 71 -12 4 989 266 125 21 0 chr15 53033523 53033571 -50461403 + (GAAAA)n Simple_repeat Simple_repeat 2 50 0 4 989 24 0 0 0 chr15 53034191 53034215 -50460759 + AT_rich Low_complexity Low_complexity 1 24 0 4 989 302 306 91 62 chr15 53035242 53035451 -50459523 - MER21B LTR ERV1 -148 715 501 4 989 940 150 0 0 chr15 53038507 53038647 -50456327 + B1_Mus2 SINE Alu 2 141 -6 4 989 198 0 0 0 chr15 53038648 53038670 -50456304 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 5 989 881 158 12 24 chr15 53039047 53039216 -50455758 - URR1A DNA MER1_type 0 226 60 5 989 321 281 124 15 chr15 53041388 53041525 -50453449 - Lx6 LINE L1 -512 6948 6797 5 989 25 31 0 0 chr15 53041616 53041648 -50453326 + AT_rich Low_complexity Low_complexity 1 32 0 5 989 198 118 0 0 chr15 53042283 53042317 -50452657 + (G)n Simple_repeat Simple_repeat 1 34 0 5 989 1278 42 12 0 chr15 53043517 53043685 -50451289 + B2_Mm1a SINE B2 1 170 -23 5 989 232 163 0 0 chr15 53043691 53043734 -50451240 - ORR1D2 LTR MaLR -27 343 301 5 989 294 264 202 25 chr15 53044009 53044119 -50450855 - MIRb SINE MIR -50 218 91 5 989 192 40 0 0 chr15 53044119 53044144 -50450830 + (CAGC)n Simple_repeat Simple_repeat 1 25 0 5 989 294 264 202 25 chr15 53044144 53044196 -50450778 - MIRb SINE MIR -178 90 29 5 989 21 0 0 0 chr15 53044383 53044404 -50450570 + AT_rich Low_complexity Low_complexity 1 21 0 5 989 209 57 0 28 chr15 53046577 53046613 -50448361 + (CAAAAA)n Simple_repeat Simple_repeat 3 37 0 6 989 354 23 0 0 chr15 53046633 53046676 -50448298 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 989 384 22 0 0 chr15 53048397 53048442 -50446532 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 989 263 301 24 0 chr15 53048639 53048722 -50446252 + (CATA)n Simple_repeat Simple_repeat 2 86 0 6 989 1112 69 28 0 chr15 53049141 53049285 -50445689 + B1_Mus1 SINE Alu 1 148 0 6 989 525 32 0 0 chr15 53049296 53049359 -50445615 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 6 989 458 239 124 21 chr15 53049820 53049965 -50445009 + RSINE1 SINE B4 4 163 -2 6 989 536 333 20 36 chr15 53051312 53051670 -50443304 + L1ME2 LINE L1 5601 5952 -212 6 989 342 0 0 0 chr15 53051825 53051863 -50443111 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 6 989 730 174 38 0 chr15 53051863 53051995 -50442979 - B1_Mur4 SINE Alu -13 137 1 6 989 2307 126 93 65 chr15 53052174 53052623 -50442351 + RMER4A LTR ERVK 5 466 0 7 989 219 137 77 19 chr15 53053749 53053801 -50441173 + GA-rich Low_complexity Low_complexity 1 55 0 7 989 369 291 43 0 chr15 53053807 53053924 -50441050 + RSINE1 SINE B4 2 123 -42 7 989 509 171 352 25 chr15 53054692 53054854 -50440120 + B3 SINE B2 2 216 0 7 989 202 62 62 0 chr15 53054865 53054897 -50440077 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 7 989 213 309 52 21 chr15 53054983 53055079 -50439895 + L2b LINE L2 3058 3156 -219 7 989 397 317 45 61 chr15 53056285 53056530 -50438444 + MamRep434 DNA TcMar 22 262 -164 7 989 302 332 213 17 chr15 53057009 53057248 -50437726 - MLT1E3 LTR MaLR -97 527 242 7 989 310 287 147 9 chr15 53057471 53057580 -50437394 + RSINE1 SINE B4 4 127 -38 7 989 911 83 23 0 chr15 53057645 53057777 -50437197 + B1_Mus1 SINE Alu 14 148 0 7 989 234 245 0 0 chr15 53058036 53058085 -50436889 + GA-rich Low_complexity Low_complexity 6 54 0 8 989 829 149 89 6 chr15 53058512 53058681 -50436293 - ORR1C2 LTR MaLR -1 383 201 8 989 243 0 0 0 chr15 53059300 53059327 -50435647 + (TC)n Simple_repeat Simple_repeat 1 27 0 8 989 26 0 0 0 chr15 53059602 53059628 -50435346 + AT_rich Low_complexity Low_complexity 1 26 0 8 989 568 280 37 46 chr15 53059638 53059855 -50435119 + B3 SINE B2 2 216 0 8 989 1101 82 0 7 chr15 53060532 53060679 -50434295 + B1_Mus1 SINE Alu 3 148 0 8 989 447 19 0 0 chr15 53061219 53061271 -50433703 + (TATG)n Simple_repeat Simple_repeat 1 52 0 8 989 851 144 250 22 chr15 53063076 53063260 -50431714 - URR1A DNA MER1_type 0 226 1 8 989 279 0 0 0 chr15 53064610 53064641 -50430333 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 8 989 346 292 0 19 chr15 53064758 53064866 -50430108 + ID_B1 SINE B4 119 224 0 8 989 522 0 0 0 chr15 53064877 53064935 -50430039 + (GGGA)n Simple_repeat Simple_repeat 2 59 0 9 989 212 281 88 0 chr15 53065437 53065551 -50429423 - MIRb SINE MIR -96 172 49 9 989 1954 167 102 38 chr15 53066374 53066797 -50428177 + RLTR11A LTR ERVK 1 445 -83 9 989 288 0 0 0 chr15 53066797 53066829 -50428145 + (TG)n Simple_repeat Simple_repeat 2 33 0 9 989 1954 167 102 38 chr15 53066829 53066884 -50428090 + RLTR11A LTR ERVK 446 509 -19 9 989 233 268 28 0 chr15 53068124 53068195 -50426779 - MER3 DNA MER1_type -73 136 64 9 989 210 71 0 0 chr15 53069827 53069855 -50425119 + (TTAA)n Simple_repeat Simple_repeat 4 31 0 9 989 242 300 0 24 chr15 53069866 53069948 -50425026 - MER3 DNA MER1_type -103 106 27 9 989 238 292 425 5 chr15 53069946 53070141 -50424833 + Tigger7 DNA MER2_type 32 308 -2183 9 989 455 256 88 22 chr15 53070258 53070394 -50424580 + B1_Mur2 SINE Alu 5 149 0 9 989 180 0 0 0 chr15 53070439 53070459 -50424515 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 9 989 883 137 20 27 chr15 53070492 53070642 -50424332 - B1_Mur4 SINE Alu 0 150 2 9 989 271 227 281 35 chr15 53071353 53071467 -50423507 - B1_Mur1 SINE Alu -3 146 5 1 989 413 244 136 16 chr15 53072049 53072174 -50422800 - MLT1A0 LTR MaLR -2 363 224 1 989 547 53 0 0 chr15 53073460 53073536 -50421438 + B1_Mus2 SINE Alu 72 147 0 1 989 1621 27 21 0 chr15 53074527 53074715 -50420259 + B2_Mm1a SINE B2 2 193 0 1 989 431 180 0 48 chr15 53075580 53075685 -50419289 + B1_Mur1 SINE Alu 47 146 -3 1 989 468 51 0 0 chr15 53076135 53076194 -50418780 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 1 989 730 156 0 119 chr15 53076194 53076354 -50418620 - B1_Mus2 SINE Alu -1 146 6 1 989 424 281 37 7 chr15 53076438 53076574 -50418400 - B1F SINE Alu -8 141 2 1 989 1084 128 65 60 chr15 53076804 53076889 -50418085 - URR1A DNA MER1_type -2 224 151 1 989 1191 111 11 22 chr15 53076889 53077074 -50417900 + B2_Mm1t SINE B2 2 184 -9 1 989 1084 128 65 60 chr15 53077074 53077204 -50417770 - URR1A DNA MER1_type -76 150 8 1 989 216 0 0 0 chr15 53078146 53078170 -50416804 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 989 1074 244 75 58 chr15 53080468 53080829 -50414145 - MTEa LTR MaLR -12 367 1 1 989 1020 189 39 10 chr15 53081276 53081479 -50413495 - B3 SINE B2 -6 210 2 1 989 384 22 0 0 chr15 53082328 53082373 -50412601 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 989 256 228 95 15 chr15 53082510 53082607 -50412367 + PB1D10 SINE Alu 6 110 -10 1 990 352 222 11 32 chr15 53084445 53084471 -50410503 - ID_B1 SINE B4 -124 100 10 1 990 366 164 0 0 chr15 53084471 53084538 -50410436 - ID4 SINE ID -7 76 10 1 990 214 302 125 0 chr15 53084540 53084636 -50410338 - MIRb SINE MIR -42 226 119 1 990 222 323 15 0 chr15 53085191 53085256 -50409718 + PB1D7 SINE Alu 40 105 -15 1 990 810 251 56 35 chr15 53085570 53085768 -50409206 - B3 SINE B2 -4 212 11 1 990 429 141 0 0 chr15 53085768 53085839 -50409135 + (TCC)n Simple_repeat Simple_repeat 2 72 0 1 990 189 0 0 0 chr15 53085841 53085862 -50409112 + (CCA)n Simple_repeat Simple_repeat 1 21 0 1 990 234 290 0 28 chr15 53086144 53086215 -50408759 + PB1D7 SINE Alu 43 111 -9 1 990 323 228 86 17 chr15 53086677 53086793 -50408181 + MER53 DNA hAT 59 182 -11 1 990 248 324 0 14 chr15 53088146 53088218 -50406756 + ID4_ SINE ID 3 73 -10 1 990 1286 27 0 0 chr15 53088848 53088994 -50405980 + B1_Mm SINE Alu 1 146 -1 1 990 258 56 0 0 chr15 53089005 53089041 -50405933 + (A)n Simple_repeat Simple_repeat 1 36 0 1 990 26 0 0 0 chr15 53089715 53089741 -50405233 + AT_rich Low_complexity Low_complexity 1 26 0 1 990 423 0 0 0 chr15 53090251 53090298 -50404676 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 990 505 335 77 55 chr15 53090330 53090785 -50404189 + MLT1C LTR MaLR 1 465 -2 1 990 324 0 0 0 chr15 53090855 53090891 -50404083 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 990 250 178 0 88 chr15 53091280 53091360 -50403614 + A-rich Low_complexity Low_complexity 2 74 0 1 990 199 263 155 21 chr15 53091927 53092024 -50402950 - MIRm SINE MIR -116 160 51 1 990 255 61 0 0 chr15 53094265 53094298 -50400676 + (GGGA)n Simple_repeat Simple_repeat 4 36 0 1 990 1387 39 36 67 chr15 53094654 53094847 -50400127 - B2_Mm1a SINE B2 -5 188 2 1 990 202 29 57 0 chr15 53095125 53095160 -50399814 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 1 990 852 218 128 0 chr15 53095381 53095695 -50399279 - MTD LTR MaLR -31 390 1 1 990 759 273 37 61 chr15 53096257 53096553 -50398421 + B4 SINE B4 4 292 0 1 990 225 308 67 0 chr15 53096574 53096678 -50398296 + PB1D7 SINE Alu 1 111 -9 1 990 319 240 99 10 chr15 53098136 53098237 -50396737 + B1F SINE Alu 40 149 0 1 990 347 259 53 44 chr15 53098305 53098418 -50396556 + ID_B1 SINE B4 91 204 -20 1 990 357 206 92 18 chr15 53098844 53098953 -50396021 - PB1D7 SINE Alu -2 118 2 1 990 351 44 0 0 chr15 53100664 53100709 -50394265 + (TCTG)n Simple_repeat Simple_repeat 1 45 0 1 990 211 217 22 0 chr15 53101661 53101707 -50393267 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 990 2047 253 41 101 chr15 53101966 53102097 -50392877 - Lx7 LINE L1 -59 7637 7530 1 990 227 103 26 0 chr15 53102097 53102136 -50392838 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 990 2047 253 41 101 chr15 53102136 53102574 -50392400 - Lx7 LINE L1 -167 7529 7116 1 990 267 31 0 0 chr15 53102574 53102606 -50392368 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 990 2047 253 41 101 chr15 53102606 53102847 -50392127 - Lx7 LINE L1 -581 7115 6875 1 990 253 283 47 66 chr15 53104806 53104912 -50390062 + MER5A DNA MER1_type 29 132 -57 1 990 239 224 17 0 chr15 53105646 53105704 -50389270 + tRNA-Ala-GCY_ tRNA tRNA 2 60 -15 1 990 221 266 36 60 chr15 53105704 53105724 -50389250 + ID2 SINE ID 18 83 0 1 990 1426 68 10 10 chr15 53105757 53105950 -50389024 + B2_Mm2 SINE B2 2 194 -1 1 990 467 78 13 0 chr15 53107059 53107136 -50387838 + (TAGA)n Simple_repeat Simple_repeat 1 78 0 1 990 588 29 0 0 chr15 53107139 53107209 -50387765 + (GGAA)n Simple_repeat Simple_repeat 1 70 0 1 990 328 304 17 42 chr15 53107425 53107545 -50387429 + PB1 SINE Alu 11 127 0 1 990 484 198 94 8 chr15 53107877 53107994 -50386980 - B1F SINE Alu -9 140 14 1 990 434 278 0 9 chr15 53108000 53108109 -50386865 - B1F2 SINE Alu -7 142 35 1 990 230 269 119 0 chr15 53108446 53108481 -50386493 + ID2 SINE ID 2 36 -47 1 990 618 82 0 0 chr15 53108481 53108566 -50386408 + (CA)n Simple_repeat Simple_repeat 1 85 0 1 990 230 269 119 0 chr15 53108566 53108597 -50386377 + ID2 SINE ID 37 75 -8 1 990 4579 64 9 2 chr15 53108835 53109418 -50385556 + L1_Mus3 LINE L1 6048 6634 -4 1 990 21 36 0 0 chr15 53109526 53109554 -50385420 + AT_rich Low_complexity Low_complexity 1 28 0 1 990 273 98 0 0 chr15 53109578 53109619 -50385355 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 1 990 897 95 95 0 chr15 53109641 53109767 -50385207 - B1_Mus1 SINE Alu -10 138 1 1 990 283 223 17 134 chr15 53109778 53109798 -50385176 + MT2B LTR ERVL 153 158 -443 1 990 546 225 18 0 chr15 53109798 53109909 -50385065 + B1_Mus1 SINE Alu 3 115 -33 1 990 324 302 92 0 chr15 53109805 53109924 -50385050 + B4 SINE B4 94 223 -69 1 990 315 0 0 0 chr15 53110455 53110490 -50384484 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 1 990 202 73 49 0 chr15 53110546 53110587 -50384387 + (TTG)n Simple_repeat Simple_repeat 1 43 0 1 990 450 192 11 24 chr15 53111891 53112003 -50382971 + PB1D9 SINE Alu 13 119 -1 1 990 423 338 62 10 chr15 53114078 53114287 -50380687 + MER58A DNA MER1_type 4 223 -1 1 990 180 330 20 78 chr15 53115576 53115678 -50379296 + L2c LINE L2 3272 3367 -20 1 990 282 289 31 62 chr15 53115984 53116146 -50378828 + MER5B DNA MER1_type 1 157 -21 1 990 264 30 0 0 chr15 53118774 53118807 -50376167 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 990 324 103 0 0 chr15 53118809 53118867 -50376107 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 990 475 282 150 20 chr15 53119223 53119476 -50375498 - MER58B DNA MER1_type -3 338 53 1 990 1347 58 40 6 chr15 53119822 53119996 -50374978 + B2_Mm2 SINE B2 1 180 -15 1 990 192 40 0 0 chr15 53119997 53120022 -50374952 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 990 220 303 0 22 chr15 53120147 53120238 -50374736 + (TATG)n Simple_repeat Simple_repeat 4 92 0 1 990 419 271 54 72 chr15 53120241 53120408 -50374566 - RSINE1 SINE B4 0 165 2 1 990 275 250 0 83 chr15 53121151 53121247 -50373727 + B4 SINE B4 4 91 -201 1 990 397 264 0 94 chr15 53121428 53121587 -50373387 + B1F2 SINE Alu 5 148 -1 1 990 1935 177 136 26 chr15 53121645 53122110 -50372864 + RMER5 LTR ERV1 16 531 -3 1 990 2115 131 27 56 chr15 53122249 53122268 -50372706 - MTC LTR MaLR -21 400 382 1 990 180 0 0 0 chr15 53122268 53122288 -50372686 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 990 2115 131 27 56 chr15 53122288 53122680 -50372294 - MTC LTR MaLR -40 381 1 1 990 572 271 7 7 chr15 53122755 53122896 -50372078 - B1_Mur1 SINE Alu -8 141 1 1 990 1402 94 16 5 chr15 53123619 53123811 -50371163 + B2_Mm2 SINE B2 1 194 -1 1 990 269 239 70 0 chr15 53124326 53124397 -50370577 - MIR SINE MIR -61 201 126 1 990 294 311 84 19 chr15 53124595 53124749 -50370225 + MER20 DNA MER1_type 31 194 -25 1 990 523 278 48 68 chr15 53125262 53125391 -50369583 - L1ME1 LINE L1 -215 5964 5849 1 990 249 33 0 0 chr15 53125391 53125421 -50369553 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 990 523 278 48 68 chr15 53125421 53125584 -50369390 - L1ME1 LINE L1 -331 5848 5678 1 990 373 242 53 0 chr15 53125703 53125798 -50369176 + B3A SINE B2 1 100 -98 1 990 348 24 0 0 chr15 53125931 53125972 -50369002 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1 990 370 274 67 67 chr15 53126821 53127001 -50367973 + L2a LINE L2 3247 3426 0 1 990 381 269 13 47 chr15 53127099 53127242 -50367732 + B1F1 SINE Alu 1 139 -10 1 990 490 294 50 94 chr15 53127322 53127684 -50367290 - ORR1E LTR MaLR -4 375 1 1 990 559 266 164 27 chr15 53129322 53129704 -50365270 + LTR33C LTR ERVL 192 625 -4 1 990 270 81 0 0 chr15 53129934 53129971 -50365003 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 990 624 289 9 32 chr15 53130386 53130604 -50364370 + B3 SINE B2 1 213 -3 1 990 21 0 0 0 chr15 53130604 53130625 -50364349 + AT_rich Low_complexity Low_complexity 1 21 0 1 990 678 242 55 25 chr15 53132074 53132273 -50362701 + B3 SINE B2 8 212 -4 1 990 633 144 113 8 chr15 53132411 53132544 -50362430 + B3 SINE B2 64 210 -6 1 990 465 19 0 0 chr15 53132585 53132639 -50362335 + (GGAA)n Simple_repeat Simple_repeat 3 56 0 2 990 321 26 0 0 chr15 53133607 53133645 -50361329 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 2 990 927 139 0 0 chr15 53133648 53133792 -50361182 - B1_Mur4 SINE Alu -6 144 1 2 990 29 0 0 0 chr15 53133940 53133969 -50361005 + AT_rich Low_complexity Low_complexity 1 29 0 2 990 211 89 43 22 chr15 53134394 53134440 -50360534 + A-rich Low_complexity Low_complexity 2 48 0 2 990 180 0 0 0 chr15 53134959 53134979 -50359995 + (A)n Simple_repeat Simple_repeat 1 20 0 2 990 207 176 0 0 chr15 53135452 53135486 -50359488 + G-rich Low_complexity Low_complexity 3 36 0 2 990 315 0 0 0 chr15 53136437 53136472 -50358502 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 990 417 215 0 0 chr15 53137600 53137693 -50357281 + (TG)n Simple_repeat Simple_repeat 2 94 0 2 990 325 244 217 57 chr15 53137835 53138020 -50356954 + B3 SINE B2 2 216 0 2 990 366 217 42 32 chr15 53140867 53140962 -50354012 + B4A SINE B4 73 168 -124 2 990 468 150 62 45 chr15 53140999 53141111 -50353863 + B1_Mus2 SINE Alu 34 147 0 2 990 342 0 0 0 chr15 53141186 53141224 -50353750 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 990 343 345 139 17 chr15 53141775 53142005 -50352969 + B4A SINE B4 30 287 -5 2 990 433 285 72 87 chr15 53144113 53144378 -50350596 + B4A SINE B4 24 284 -8 2 990 425 273 51 25 chr15 53144781 53144939 -50350035 - RSINE1 SINE B4 0 165 4 2 990 182 136 0 22 chr15 53145238 53145283 -50349691 + (ATTTG)n Simple_repeat Simple_repeat 1 44 0 2 990 26 0 0 0 chr15 53145291 53145317 -50349657 + GC_rich Low_complexity Low_complexity 1 26 0 2 990 299 205 23 93 chr15 53145329 53145415 -50349559 - PB1D10 SINE Alu -6 111 32 2 990 315 0 0 0 chr15 53146299 53146334 -50348640 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 990 725 150 17 0 chr15 53146339 53146459 -50348515 - B1_Mur2 SINE Alu -9 140 19 2 990 263 231 45 97 chr15 53146459 53146472 -50348502 + YREP_Mm Unknown Unknown 186 311 -1501 2 990 302 125 36 0 chr15 53146630 53146686 -50348288 + CT-rich Low_complexity Low_complexity 3 60 0 2 990 1233 54 0 0 chr15 53146688 53146835 -50348139 - B1_Mus1 SINE Alu -1 147 1 2 990 355 221 35 103 chr15 53149543 53149659 -50345315 + PB1D9 SINE Alu 1 108 -12 2 990 240 299 45 36 chr15 53149790 53149901 -50345073 + PB1D10 SINE Alu 1 112 -5 2 990 316 283 65 0 chr15 53149955 53150047 -50344927 + ID_B1 SINE B4 109 206 -18 2 990 210 37 0 0 chr15 53150145 53150172 -50344802 + (TGGGGG)n Simple_repeat Simple_repeat 6 32 0 2 990 399 21 0 0 chr15 53150471 53150519 -50344455 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 990 304 267 57 47 chr15 53150519 53150625 -50344349 - RSINE1 SINE B4 -41 124 18 2 990 327 246 119 91 chr15 53152515 53152658 -50342316 + B4 SINE B4 77 223 -69 2 990 623 143 77 31 chr15 53152533 53152663 -50342311 + B1_Mur4 SINE Alu 14 149 -1 2 990 228 67 0 0 chr15 53152681 53152711 -50342263 + (GGGA)n Simple_repeat Simple_repeat 3 32 0 2 990 538 190 16 87 chr15 53152730 53152857 -50342117 + PB1D9 SINE Alu 2 119 -1 2 990 1356 110 16 0 chr15 53154847 53155038 -50339936 + B2_Mm2 SINE B2 2 195 0 2 990 189 0 0 0 chr15 53155080 53155101 -50339873 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 2 990 183 114 0 0 chr15 53156821 53156856 -50338118 + (A)n Simple_repeat Simple_repeat 1 35 0 2 990 442 235 250 48 chr15 53157002 53157230 -50337744 + B4 SINE B4 1 274 -18 2 990 264 200 0 176 chr15 53158204 53158295 -50336679 + PB1D10 SINE Alu 31 105 -12 2 990 1452 49 0 0 chr15 53158295 53158520 -50336454 + (TAGA)n Simple_repeat Simple_repeat 1 225 0 2 990 231 36 0 0 chr15 53158544 53158572 -50336402 + (CATA)n Simple_repeat Simple_repeat 3 30 0 2 990 22 0 0 0 chr15 53158658 53158680 -50336294 + AT_rich Low_complexity Low_complexity 1 22 0 2 990 488 219 37 8 chr15 53159977 53160095 -50334879 - PB1D7 SINE Alu 0 120 1 2 990 270 0 0 0 chr15 53160172 53160202 -50334772 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 990 233 292 0 27 chr15 53160206 53160280 -50334694 + GA-rich Low_complexity Low_complexity 1 72 0 2 990 1478 219 87 15 chr15 53160670 53161059 -50333915 - MTD LTR MaLR 0 419 3 2 990 198 341 11 54 chr15 53161455 53161548 -50333426 - L2c LINE L2 -4 3383 3295 2 990 324 211 14 0 chr15 53161768 53161839 -50333135 + B1_Mur4 SINE Alu 14 85 -65 2 990 415 264 0 0 chr15 53161987 53162078 -50332896 - B3 SINE B2 -125 91 1 2 990 288 0 0 0 chr15 53162256 53162288 -50332686 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 990 345 191 0 0 chr15 53162943 53163011 -50331963 - ID_B1 SINE B4 -51 173 106 2 990 290 304 0 11 chr15 53163011 53163036 -50331938 - PB1D10 SINE Alu -25 92 1 2 990 207 0 0 0 chr15 53163492 53163515 -50331459 + (A)n Simple_repeat Simple_repeat 1 23 0 2 990 1094 66 7 0 chr15 53164535 53164671 -50330303 - B1_Mus1 SINE Alu -9 139 3 2 990 23 54 0 0 chr15 53164854 53164891 -50330083 + AT_rich Low_complexity Low_complexity 1 37 0 2 990 338 344 67 45 chr15 53165304 53165438 -50329536 + B4A SINE B4 1 137 -155 2 990 1351 62 0 86 chr15 53165926 53166086 -50328888 + B2_Mm2 SINE B2 3 161 -34 2 990 228 67 0 0 chr15 53166086 53166116 -50328858 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 2 990 1351 62 0 86 chr15 53166116 53166165 -50328809 + B2_Mm2 SINE B2 162 194 -1 2 990 386 246 97 16 chr15 53168526 53168650 -50326324 - MIRc SINE MIR -27 241 108 2 990 261 0 0 0 chr15 53169354 53169383 -50325591 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 2 990 1051 68 0 0 chr15 53169459 53169606 -50325368 + B1_Mus1 SINE Alu 2 148 0 2 990 237 108 0 0 chr15 53169710 53169747 -50325227 + (T)n Simple_repeat Simple_repeat 1 37 0 2 990 723 248 223 34 chr15 53170184 53170422 -50324552 - B4A SINE B4 -8 284 2 2 990 29 47 0 0 chr15 53170434 53170477 -50324497 + AT_rich Low_complexity Low_complexity 1 43 0 2 990 310 288 41 9 chr15 53171024 53171154 -50323820 + MIR3 SINE MIR 2 133 -143 2 990 234 0 0 0 chr15 53172013 53172039 -50322935 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 2 990 352 292 102 0 chr15 53172440 53172577 -50322397 + RSINE1 SINE B4 2 152 -13 2 990 310 283 0 78 chr15 53172963 53172976 -50321998 + MT2B LTR ERVL 152 155 -446 2 990 563 209 2 3 chr15 53172976 53173105 -50321869 + B1_Mus2 SINE Alu 1 128 -21 2 990 198 0 0 0 chr15 53175370 53175392 -50319582 + (TGAA)n Simple_repeat Simple_repeat 2 23 0 2 990 21 0 0 0 chr15 53176329 53176350 -50318624 + AT_rich Low_complexity Low_complexity 1 21 0 2 990 212 164 18 35 chr15 53177542 53177599 -50317375 + (CGCGG)n Simple_repeat Simple_repeat 2 57 0 2 990 212 0 0 35 chr15 53177848 53177877 -50317097 + (CGCGG)n Simple_repeat Simple_repeat 1 28 0 2 990 207 0 0 0 chr15 53178576 53178599 -50316375 + (A)n Simple_repeat Simple_repeat 1 23 0 2 990 809 274 20 0 chr15 53179664 53179868 -50315106 - B3 SINE B2 -6 210 3 2 990 243 0 0 0 chr15 53179945 53179972 -50315002 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 990 445 327 26 13 chr15 53179974 53180126 -50314848 - B3A SINE B2 -42 156 3 2 990 1725 249 88 19 chr15 53180255 53181053 -50313921 + L1MA8 LINE L1 5102 5951 -340 2 990 618 122 159 6 chr15 53181148 53181305 -50313669 + Lx9 LINE L1 7464 7644 0 2 990 377 241 122 14 chr15 53181324 53181471 -50313503 + L1MA8 LINE L1 5946 6108 -204 2 990 498 311 0 0 chr15 53181477 53181609 -50313365 + ID_B1 SINE B4 91 222 -2 2 990 366 362 75 30 chr15 53181701 53181966 -50313008 - MER47B DNA MER2_type -140 278 2 2 990 251 316 0 60 chr15 53182089 53182173 -50312801 - PB1D10 SINE Alu -34 83 5 2 990 196 328 37 50 chr15 53182705 53182870 -50312104 + MIRm SINE MIR 49 197 -65 2 990 258 56 0 0 chr15 53184091 53184127 -50310847 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 2 990 1123 50 43 0 chr15 53184152 53184293 -50310681 - B1_Mus1 SINE Alu 0 148 2 2 990 331 302 8 70 chr15 53184444 53184572 -50310402 - MER5A DNA MER1_type -69 120 1 2 990 184 257 54 54 chr15 53184663 53184737 -50310237 - L2 LINE L2 -532 2887 2814 2 990 1049 184 30 52 chr15 53184756 53184986 -50309988 - URR1B DNA MER1_type 0 225 1 2 990 639 303 11 5 chr15 53185047 53185236 -50309738 - ID_B1 SINE B4 -34 190 1 2 990 21 36 0 0 chr15 53186014 53186042 -50308932 + AT_rich Low_complexity Low_complexity 1 28 0 2 990 333 102 0 0 chr15 53187662 53187721 -50307253 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 990 1361 269 81 44 chr15 53187741 53187851 -50307123 - Lx7 LINE L1 -282 7414 7319 2 990 182 91 30 0 chr15 53187851 53187884 -50307090 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 990 1361 269 81 44 chr15 53187884 53188301 -50306673 - Lx7 LINE L1 -378 7318 6867 2 990 200 305 34 0 chr15 53188685 53188744 -50306230 + MIRm SINE MIR 82 142 -134 2 990 610 254 7 0 chr15 53189606 53189744 -50305230 - B1_Mur1 SINE Alu -1 148 10 2 990 276 316 91 24 chr15 53189994 53190232 -50304742 - MIR SINE MIR -6 256 3 2 990 376 335 69 43 chr15 53190313 53190544 -50304430 - MLT1F2 LTR MaLR -2 558 322 2 990 1206 61 0 0 chr15 53190800 53190947 -50304027 + B1_Mus2 SINE Alu 1 147 0 2 990 243 146 0 0 chr15 53190947 53190988 -50303986 + (A)n Simple_repeat Simple_repeat 1 41 0 2 990 216 0 0 0 chr15 53191988 53192012 -50302962 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 990 435 38 0 0 chr15 53192012 53192064 -50302910 + (TA)n Simple_repeat Simple_repeat 2 54 0 3 990 471 313 20 20 chr15 53192157 53192307 -50302667 + RSINE1 SINE B4 15 164 -1 3 990 394 102 14 14 chr15 53192339 53192409 -50302565 + (GA)n Simple_repeat Simple_repeat 2 71 0 3 990 271 233 86 32 chr15 53192958 53193051 -50301923 - MTEa LTR MaLR -2 377 280 3 990 410 339 0 9 chr15 53193348 53193464 -50301510 - PB1D10 SINE Alu 0 117 3 3 990 301 352 132 56 chr15 53193553 53193803 -50301171 + B4A SINE B4 9 277 -15 3 990 381 43 0 0 chr15 53193834 53193881 -50301093 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 990 252 111 0 0 chr15 53193882 53193927 -50301047 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 3 990 23 33 0 0 chr15 53193953 53193983 -50300991 + AT_rich Low_complexity Low_complexity 1 30 0 3 990 493 307 29 0 chr15 53194750 53194890 -50300084 + Lx9 LINE L1 6599 6742 -902 3 990 432 299 27 20 chr15 53196863 53197013 -50297961 + MER5A DNA MER1_type 7 157 -32 3 990 407 301 22 8 chr15 53197239 53197373 -50297601 - MER5A1 DNA MER1_type -1 165 30 3 990 339 85 0 0 chr15 53197599 53197646 -50297328 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 990 452 376 20 0 chr15 53197648 53197797 -50297177 - RSINE1 SINE B4 -12 153 2 3 990 872 229 66 5 chr15 53197843 53198041 -50296933 - B3 SINE B2 -5 211 2 3 990 231 36 0 0 chr15 53198062 53198090 -50296884 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 990 1365 65 0 0 chr15 53198138 53198504 -50296470 + (TCTA)n Simple_repeat Simple_repeat 1 366 0 3 990 393 296 8 31 chr15 53198545 53198674 -50296300 - RSINE1 SINE B4 -29 136 11 3 990 219 170 0 0 chr15 53199473 53199520 -50295454 + (CTTG)n Simple_repeat Simple_repeat 2 48 0 3 990 918 28 0 0 chr15 53199521 53199630 -50295344 + (TTTCC)n Simple_repeat Simple_repeat 2 110 0 3 990 694 93 18 47 chr15 53199630 53199799 -50295175 + CT-rich Low_complexity Low_complexity 5 168 0 3 990 2350 202 42 18 chr15 53200340 53200844 -50294130 - RLTR20D LTR ERVK -51 517 2 3 990 647 320 110 21 chr15 53200898 53201224 -50293750 + MLT1A0 LTR MaLR 5 359 -6 3 990 273 321 214 0 chr15 53202456 53202568 -50292406 - RSINE1 SINE B4 -16 149 14 3 990 3665 94 0 0 chr15 53203573 53204054 -50290920 - L1_Mus3 LINE L1 -34 5849 5369 3 990 5855 76 5 20 chr15 53204054 53204858 -50290116 + L1_Mus3 LINE L1 5841 6632 -6 3 990 236 131 16 47 chr15 53204916 53204980 -50289994 + (TAA)n Simple_repeat Simple_repeat 2 63 0 3 990 285 346 67 0 chr15 53205031 53205135 -50289839 - PB1D10 SINE Alu 0 117 7 3 990 1064 202 120 41 chr15 53205507 53205848 -50289126 - Lx7 LINE L1 -1 7695 7328 3 990 304 253 105 0 chr15 53205866 53205961 -50289013 - Lx7 LINE L1 -328 7368 7264 3 990 3845 190 57 5 chr15 53205957 53206981 -50287993 - Lx7 LINE L1 -1534 6162 5077 3 990 1727 121 353 14 chr15 53206987 53207415 -50287559 - Lx7 LINE L1 -1603 4277 3705 3 990 27720 24 1 0 chr15 53207442 53211345 -50283629 - L1Md_T LINE L1 0 6582 2678 3 990 292 234 13 0 chr15 53211341 53211418 -50283556 - Lx7 LINE L1 -2164 3716 3639 3 990 613 48 0 0 chr15 53211456 53211539 -50283435 - B1_Mus2 SINE Alu 0 147 65 3 990 1010 168 80 14 chr15 53211543 53211755 -50283219 + URR1A DNA MER1_type 1 226 0 3 990 2226 168 57 0 chr15 53211760 53212183 -50282791 - L1_Mur3 LINE L1 -1792 4088 3642 3 990 32 57 0 0 chr15 53212186 53212239 -50282735 + AT_rich Low_complexity Low_complexity 1 53 0 3 990 527 87 0 0 chr15 53212619 53212688 -50282286 - L1_Mur3 LINE L1 -4060 1820 1752 3 990 21 57 0 0 chr15 53212700 53212735 -50282239 + AT_rich Low_complexity Low_complexity 1 35 0 3 990 7634 167 59 119 chr15 53212741 53213237 -50281737 - L1_Mur3 LINE L1 -2242 3638 3136 3 990 195 69 0 0 chr15 53213237 53213266 -50281708 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 990 7634 167 59 119 chr15 53213266 53213299 -50281675 - L1_Mur3 LINE L1 -2745 3135 3121 3 990 333 0 0 0 chr15 53213299 53213336 -50281638 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 990 7634 167 59 119 chr15 53213336 53214192 -50280782 - L1_Mur3 LINE L1 -2760 3120 2295 3 990 671 223 0 8 chr15 53214192 53214323 -50280651 - B3 SINE B2 -86 130 1 3 990 7634 167 59 119 chr15 53214323 53214553 -50280421 - L1_Mur3 LINE L1 -2760 2294 2071 3 990 375 23 0 0 chr15 53214553 53214597 -50280377 + (TGG)n Simple_repeat Simple_repeat 1 44 0 3 990 7634 167 59 119 chr15 53214597 53214953 -50280021 - L1_Mur3 LINE L1 -3810 2070 1662 3 123 2161 158 130 2 chr15 53214967 53215398 -50279576 + RLTR25A LTR ERVK 5 490 -613 3 991 592 245 68 141 chr15 53215385 53215755 -50279219 + RLTR25A LTR ERVK 686 1028 0 3 991 1553 156 73 124 chr15 53215755 53216100 -50278874 - L1_Mur3 LINE L1 -4225 1655 1280 3 991 486 0 0 0 chr15 53216100 53216154 -50278820 + (TTCC)n Simple_repeat Simple_repeat 3 56 0 3 991 1223 94 0 6 chr15 53216155 53216336 -50278638 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 991 1553 156 73 124 chr15 53216336 53216393 -50278581 - L1_Mur3 LINE L1 -4601 1279 1272 3 991 608 198 235 39 chr15 53216393 53216572 -50278402 - B3 SINE B2 -1 215 2 3 991 4008 168 62 109 chr15 53216572 53216666 -50278308 - L1_Mur3 LINE L1 -4609 1271 1189 3 991 1279 120 15 20 chr15 53216666 53216862 -50278112 - B2_Mm2 SINE B2 0 195 1 3 991 4008 204 27 64 chr15 53216862 53217799 -50277175 - L1_Mur3 LINE L1 -6540 1188 279 3 991 244 282 71 0 chr15 53217799 53217884 -50277090 + B4A SINE B4 77 167 -125 3 991 722 167 0 0 chr15 53217809 53217935 -50277039 + B1_Mur4 SINE Alu 9 134 -16 3 991 225 0 0 0 chr15 53217938 53217963 -50277011 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 3 991 628 228 24 82 chr15 53219249 53219455 -50275519 + B3A SINE B2 5 198 0 3 991 1714 225 97 110 chr15 53219467 53219702 -50275272 - Lx7 LINE L1 -4 7692 7449 3 991 1286 99 28 0 chr15 53219702 53219884 -50275090 + B2_Mm2 SINE B2 2 188 -7 3 991 1714 225 97 110 chr15 53219884 53220268 -50274706 - Lx7 LINE L1 -248 7448 7081 3 991 324 0 0 0 chr15 53220280 53220316 -50274658 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 3 991 188 163 0 23 chr15 53220874 53220918 -50274056 + (TTG)n Simple_repeat Simple_repeat 1 43 0 3 991 331 265 32 8 chr15 53221204 53221332 -50273642 - MLT1D LTR MaLR -358 147 20 3 991 274 42 20 41 chr15 53221349 53221398 -50273576 + (TTTTTG)n Simple_repeat Simple_repeat 1 48 0 3 991 523 267 43 36 chr15 53221399 53221539 -50273435 - B1_Mur2 SINE Alu 0 149 9 3 991 232 307 44 22 chr15 53221619 53221709 -50273265 - ID_B1 SINE B4 -52 172 81 3 991 242 337 30 0 chr15 53221763 53221864 -50273110 + L2a LINE L2 3322 3425 -1 3 991 201 303 0 29 chr15 53221962 53222030 -50272944 + GA-rich Low_complexity Low_complexity 1 66 0 3 991 365 239 108 72 chr15 53222195 53222468 -50272506 + BGLII_B LTR ERVK 194 476 -52 3 991 199 290 107 45 chr15 53223011 53223123 -50271851 - L2b LINE L2 -2 3373 3255 3 991 841 341 125 32 chr15 53223130 53223561 -50271413 - LTR16B1 LTR ERVL -9 471 1 3 991 1239 116 6 0 chr15 53224430 53224611 -50270363 + B2_Mm2 SINE B2 1 182 -13 3 991 348 24 0 0 chr15 53224944 53224985 -50269989 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 991 264 252 29 29 chr15 53225068 53225170 -50269804 - L1MB5 LINE L1 -13 6165 6064 3 991 625 318 86 24 chr15 53225290 53225754 -50269220 - L1MB5 LINE L1 -262 5912 5420 3 991 210 37 0 0 chr15 53225820 53225847 -50269127 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 991 1082 280 108 19 chr15 53225847 53225910 -50269064 + ORR1D2 LTR MaLR 6 68 -302 3 991 3831 166 93 68 chr15 53225910 53226789 -50268185 - RMER19B LTR ERVK -1 901 1 3 991 1082 280 108 19 chr15 53226789 53227049 -50267925 + ORR1D2 LTR MaLR 69 358 -12 3 991 866 245 33 33 chr15 53227165 53227380 -50267594 - B3 SINE B2 0 216 2 3 991 3955 217 66 18 chr15 53227556 53228552 -50266422 - Lx9 LINE L1 -149 7495 6452 3 991 373 338 47 43 chr15 53228552 53228784 -50266190 - L1MEc LINE L1 -874 5445 5213 3 991 716 300 27 53 chr15 53228824 53229123 -50265851 - B4A SINE B4 0 292 2 3 991 266 300 50 74 chr15 53229126 53229425 -50265549 - L1MEc LINE L1 -1092 5227 4936 3 991 678 269 152 29 chr15 53229559 53229756 -50265218 - L1MEc LINE L1 -4544 1856 1629 3 991 1257 27 0 0 chr15 53229756 53229905 -50265069 + (TCTCCC)n Simple_repeat Simple_repeat 6 154 0 3 991 1183 57 0 0 chr15 53229910 53230051 -50264923 - B1_Mus1 SINE Alu -7 141 1 3 991 678 269 152 29 chr15 53230051 53230333 -50264641 - L1MEc LINE L1 -4772 1628 1311 3 991 387 239 109 22 chr15 53230371 53230508 -50264466 - B1_Mur2 SINE Alu 0 149 1 3 991 2325 293 53 50 chr15 53230552 53231489 -50263485 - Lx8 LINE L1 -182 7291 6352 3 991 189 0 0 0 chr15 53232065 53232086 -50262888 + (T)n Simple_repeat Simple_repeat 1 21 0 3 991 666 0 0 0 chr15 53232299 53232373 -50262601 + (TCC)n Simple_repeat Simple_repeat 2 75 0 3 991 364 316 45 45 chr15 53232451 53232693 -50262281 - L1MEc LINE L1 -5084 1331 1090 3 991 276 100 0 0 chr15 53232701 53232741 -50262233 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 991 1550 28 22 0 chr15 53232845 53233026 -50261948 + B2_Mm1t SINE B2 2 186 -7 3 991 1352 282 43 0 chr15 53233556 53233995 -50260979 + Lx8 LINE L1 6643 7100 -373 3 991 390 243 194 0 chr15 53234073 53234176 -50260798 + MTC LTR MaLR 67 189 -232 3 991 556 161 0 0 chr15 53234211 53234298 -50260676 + MTC LTR MaLR 1 87 -334 3 991 16866 141 123 11 chr15 53234346 53238051 -50256923 - Lx LINE L1 0 6654 2786 3 991 1242 41 0 0 chr15 53238051 53238198 -50256776 - B1_Mm SINE Alu 0 147 1 3 991 16866 154 156 9 chr15 53238198 53239170 -50255804 - Lx LINE L1 -3098 2785 1375 3 991 3717 146 28 5 chr15 53239152 53239791 -50255183 - L1VL2 LINE L1 -5552 783 130 3 991 1743 215 6 9 chr15 53239791 53240110 -50254864 + MTC LTR MaLR 104 421 0 3 991 765 275 5 21 chr15 53240147 53240340 -50254634 - MTD LTR MaLR -225 194 5 3 991 2078 198 13 16 chr15 53240349 53240724 -50254250 + ORR1D1 LTR MaLR 1 374 0 3 991 232 78 59 0 chr15 53241629 53241680 -50253294 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 3 991 325 345 17 0 chr15 53241734 53241850 -50253124 + L3b LINE CR1 46 163 -319 3 991 1342 96 16 0 chr15 53242603 53242790 -50252184 - B2_Mm2 SINE B2 -5 190 1 3 991 3002 293 60 25 chr15 53242802 53244018 -50250956 - Lx8 LINE L1 -6 7467 6210 3 991 7579 89 82 7 chr15 53244016 53245912 -50249062 + Lx3_Mus LINE L1 4967 7001 -8 3 991 1142 284 55 45 chr15 53245954 53246724 -50248250 - Lx8 LINE L1 -1519 6177 5359 3 991 357 62 0 0 chr15 53247202 53247250 -50247724 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 991 602 301 203 0 chr15 53247307 53247524 -50247450 - B4A SINE B4 -31 261 1 3 991 217 364 105 10 chr15 53247569 53247769 -50247205 + L2c LINE L2 2534 2752 -667 3 991 195 69 0 0 chr15 53247819 53247848 -50247126 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 991 182 344 49 0 chr15 53247939 53248000 -50246974 + L2c LINE L2 3163 3226 -161 3 991 198 361 29 58 chr15 53248854 53248957 -50246017 + L2c LINE L2 3278 3377 -10 3 991 245 349 36 0 chr15 53249937 53250020 -50244954 - ID_B1 SINE B4 -8 216 131 3 991 237 158 0 0 chr15 53250224 53250262 -50244712 + A-rich Low_complexity Low_complexity 1 38 0 3 991 204 389 46 0 chr15 53250764 53250872 -50244102 + MIRb SINE MIR 41 153 -115 3 991 267 372 0 0 chr15 53251271 53251373 -50243601 - L2 LINE L2 -925 2494 2393 4 991 23 0 0 0 chr15 53251609 53251632 -50243342 + AT_rich Low_complexity Low_complexity 1 23 0 4 991 192 152 0 0 chr15 53251751 53251784 -50243190 + CT-rich Low_complexity Low_complexity 2 34 0 4 991 435 295 35 83 chr15 53251804 53251867 -50243107 - ID_B1 SINE B4 -10 214 153 4 991 1045 62 13 40 chr15 53251867 53252018 -50242956 - B1_Mm SINE Alu 0 147 1 4 991 435 303 32 73 chr15 53252018 53252109 -50242865 - ID_B1 SINE B4 -72 152 70 4 991 1858 179 63 63 chr15 53252171 53252565 -50242409 + ORR1B1 LTR MaLR 1 394 0 4 991 950 48 8 0 chr15 53252759 53252883 -50242091 + (GAA)n Simple_repeat Simple_repeat 2 126 0 4 991 477 0 0 0 chr15 53253628 53253681 -50241293 + (TTA)n Simple_repeat Simple_repeat 2 54 0 4 991 1068 93 0 23 chr15 53253720 53253895 -50241079 + (TTCC)n Simple_repeat Simple_repeat 3 173 0 4 991 239 132 38 0 chr15 53253933 53253986 -50240988 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 4 991 372 71 0 0 chr15 53253986 53254042 -50240932 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 991 244 278 81 27 chr15 53254068 53254142 -50240832 - B4 SINE B4 -131 161 84 4 991 225 0 0 0 chr15 53254314 53254339 -50240635 + (CATA)n Simple_repeat Simple_repeat 1 25 0 4 991 618 104 0 0 chr15 53254362 53254458 -50240516 + (CA)n Simple_repeat Simple_repeat 2 97 0 4 991 717 301 76 23 chr15 53254523 53254785 -50240189 - MER21B LTR ERV1 -109 754 479 4 991 286 246 15 15 chr15 53254979 53255045 -50239929 - RMER15 LTR ERVL -107 468 403 4 991 1269 319 66 18 chr15 53255048 53255658 -50239316 - Lx8 LINE L1 -236 7237 6599 4 991 311 315 165 50 chr15 53255785 53256046 -50238928 - MER21B LTR ERV1 -553 310 20 4 991 195 42 0 0 chr15 53256173 53256197 -50238777 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 991 357 331 96 0 chr15 53256311 53256477 -50238497 + MER5A DNA MER1_type 5 186 -3 4 991 378 0 0 0 chr15 53257584 53257626 -50237348 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 991 669 159 78 52 chr15 53258442 53258794 -50236180 + Lx9 LINE L1 7341 7644 0 4 991 21 0 0 0 chr15 53258977 53258998 -50235976 + AT_rich Low_complexity Low_complexity 1 21 0 4 991 695 316 18 67 chr15 53259257 53259481 -50235493 + ID_B1 SINE B4 6 218 -6 4 991 239 321 13 13 chr15 53259595 53259674 -50235300 - ID2 SINE ID -3 80 2 4 991 265 158 0 0 chr15 53259828 53259866 -50235108 + tRNA-Arg-AGA tRNA tRNA 1 38 -38 4 991 181 196 115 19 chr15 53260083 53260135 -50234839 + MIR SINE MIR 72 128 -134 4 991 531 265 86 62 chr15 53260482 53260868 -50234106 + L1M4 LINE L1 4831 5225 -921 4 991 341 327 69 51 chr15 53260953 53261227 -50233747 + L1M4 LINE L1 5361 5639 -540 4 991 2035 209 56 104 chr15 53261258 53261813 -50233161 - RMER15 LTR ERVL -26 549 22 4 991 6465 111 38 9 chr15 53261924 53263349 -50231625 - Lx LINE L1 -5 6649 5182 4 991 3828 259 111 2 chr15 53263343 53264565 -50230409 - Lx7 LINE L1 -591 7105 5751 4 991 6963 155 35 65 chr15 53264569 53265858 -50229116 - L1_Mur3 LINE L1 -804 5076 3815 4 991 1133 57 0 0 chr15 53265858 53265998 -50228976 + B1_Mus1 SINE Alu 2 141 -7 4 991 6963 155 35 65 chr15 53265998 53266284 -50228690 - L1_Mur3 LINE L1 -2066 3814 3548 4 991 1273 254 97 43 chr15 53266280 53266857 -50228117 - RMER1B Other Other -535 531 44 4 991 8777 170 33 36 chr15 53266973 53268347 -50226627 - L1_Mur3 LINE L1 -2614 3266 1926 4 991 1197 54 0 0 chr15 53268347 53268494 -50226480 - B1_Mus2 SINE Alu 0 147 1 4 991 8777 205 40 22 chr15 53268494 53270048 -50224926 - L1_Mur3 LINE L1 -3955 1925 313 4 991 913 293 30 81 chr15 53270338 53270735 -50224239 - MTE2a LTR MaLR 0 379 3 4 991 812 308 63 39 chr15 53270795 53271255 -50223719 - L1MA10 LINE L1 0 6334 5864 4 991 1698 252 70 32 chr15 53271861 53272422 -50222552 - RMER1C Other Other -7 1335 754 4 991 287 333 18 9 chr15 53272467 53272579 -50222395 - RMER1C Other Other -1201 141 29 4 991 291 246 180 28 chr15 53272938 53273072 -50221902 - MTE2a LTR MaLR -85 334 179 4 991 521 153 263 0 chr15 53273085 53273222 -50221752 - Lx3C LINE L1 -45 6931 6759 4 991 521 271 112 58 chr15 53273223 53273465 -50221509 - MTE2a LTR MaLR -162 259 6 4 991 30 45 0 0 chr15 53273807 53273851 -50221123 + AT_rich Low_complexity Low_complexity 1 44 0 4 991 217 188 21 0 chr15 53274102 53274150 -50220824 + A-rich Low_complexity Low_complexity 5 53 0 4 991 231 26 0 0 chr15 53274172 53274211 -50220763 + Lx2 LINE L1 6958 6996 -1 4 991 22 35 0 0 chr15 53274431 53274460 -50220514 + AT_rich Low_complexity Low_complexity 1 29 0 4 991 3235 277 60 30 chr15 53274483 53275506 -50219468 - MERVL_2A-int LTR ERVL -1410 4351 3300 4 991 2027 171 38 18 chr15 53275506 53275905 -50219069 + MTB_Mm LTR MaLR 1 407 0 4 991 3235 277 60 30 chr15 53275905 53276040 -50218934 - MERVL_2A-int LTR ERVL -2462 3299 3158 4 991 218 276 29 23 chr15 53276539 53276637 -50218337 + MIRc SINE MIR 118 219 -57 4 991 220 319 72 36 chr15 53276912 53277056 -50217918 + MIRb SINE MIR 110 261 -1 4 991 295 365 72 17 chr15 53277149 53277386 -50217588 + L4 LINE RTE 1480 1729 -300 4 991 199 303 64 0 chr15 53277680 53277789 -50217185 + L4 LINE RTE 1914 2029 0 4 991 23 54 0 0 chr15 53278743 53278780 -50216194 + AT_rich Low_complexity Low_complexity 1 37 0 4 991 1067 212 18 41 chr15 53279464 53279685 -50215289 - B3 SINE B2 0 216 1 4 991 528 199 41 34 chr15 53280169 53280315 -50214659 + MER103 DNA DNA 17 163 -3 4 991 230 263 25 62 chr15 53280497 53280578 -50214396 - Lx8 LINE L1 -9 7464 7387 4 991 1266 290 73 60 chr15 53280715 53281178 -50213796 - Lx8 LINE L1 -352 7121 6653 4 991 234 0 0 0 chr15 53281566 53281592 -50213382 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 4 991 2024 327 38 32 chr15 53282914 53283811 -50211163 - Lx8 LINE L1 0 7473 6572 4 991 448 116 23 0 chr15 53283969 53284055 -50210919 + (GGGAGA)n Simple_repeat Simple_repeat 3 90 0 4 991 324 0 0 0 chr15 53284093 53284129 -50210845 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 991 216 0 0 0 chr15 53284129 53284152 -50210822 + (GA)n Simple_repeat Simple_repeat 2 25 0 4 991 207 209 0 0 chr15 53285839 53285882 -50209092 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 4 991 830 117 0 14 chr15 53285883 53286022 -50208952 + (GAAAA)n Simple_repeat Simple_repeat 5 141 0 4 991 273 333 0 25 chr15 53286283 53286363 -50208611 - ID4_ SINE ID -5 78 1 4 991 330 67 0 0 chr15 53286645 53286690 -50208284 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 991 309 231 12 82 chr15 53287629 53287714 -50207260 + ID4_ SINE ID 3 81 -2 4 991 913 271 27 9 chr15 53287848 53288068 -50206906 - ID_B1 SINE B4 0 224 1 4 991 670 173 94 36 chr15 53288695 53288833 -50206141 - B1_Mus1 SINE Alu -2 146 1 4 991 208 259 0 36 chr15 53291893 53291949 -50203025 + L2a LINE L2 3368 3421 -5 4 991 495 45 0 0 chr15 53294167 53294233 -50200741 + (TG)n Simple_repeat Simple_repeat 1 66 0 4 991 235 318 78 18 chr15 53294855 53295073 -50199901 + L1M5 LINE L1 5595 5825 -299 4 991 217 196 0 38 chr15 53295136 53295189 -50199785 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 4 991 440 125 10 0 chr15 53295562 53295658 -50199316 + (GA)n Simple_repeat Simple_repeat 2 98 0 4 991 207 69 0 0 chr15 53295859 53295888 -50199086 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 991 367 170 294 28 chr15 53296779 53296888 -50198086 + B1_Mus2 SINE Alu 3 140 -7 4 991 618 298 50 69 chr15 53296934 53297136 -50197838 + B4 SINE B4 1 198 -94 4 991 710 252 0 7 chr15 53297032 53297168 -50197806 + B1_Mur3 SINE Alu 6 136 -13 4 991 210 37 0 0 chr15 53297168 53297195 -50197779 + (CAA)n Simple_repeat Simple_repeat 1 27 0 4 991 712 295 50 40 chr15 53297213 53297411 -50197563 + B4A SINE B4 87 286 -6 4 991 210 71 0 0 chr15 53297411 53297439 -50197535 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 991 937 223 55 36 chr15 53297482 53297701 -50197273 + ID_B1 SINE B4 1 223 -1 4 991 21 0 0 0 chr15 53297707 53297728 -50197246 + AT_rich Low_complexity Low_complexity 1 21 0 4 991 343 140 40 70 chr15 53298054 53298154 -50196820 - IAPLTR1_Mm LTR ERVK -52 315 219 4 991 250 192 12 49 chr15 53298159 53298241 -50196733 + GA-rich Low_complexity Low_complexity 5 83 0 4 991 313 325 66 61 chr15 53298687 53298900 -50196074 + MIRb SINE MIR 27 240 -28 4 991 708 291 45 10 chr15 53299910 53300111 -50194863 + MER20 DNA MER1_type 2 209 -10 4 991 378 0 0 0 chr15 53300617 53300659 -50194315 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 991 570 301 40 20 chr15 53300703 53300919 -50194055 + MLT2B4 LTR ERVL 1 223 -297 4 991 3595 33 2 2 chr15 53300919 53301315 -50193659 + MTA_Mm LTR MaLR 1 396 0 4 991 375 348 60 85 chr15 53301315 53301415 -50193559 + MLT2B4 LTR ERVL 224 309 -245 4 991 216 241 0 0 chr15 53301466 53301524 -50193450 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 991 284 226 106 11 chr15 53302243 53302337 -50192637 + L1MA5 LINE L1 6195 6297 -3 4 991 21 0 0 0 chr15 53302340 53302361 -50192613 + AT_rich Low_complexity Low_complexity 1 21 0 4 991 420 20 0 0 chr15 53302399 53302448 -50192526 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 991 396 0 0 0 chr15 53302448 53302491 -50192483 + (GA)n Simple_repeat Simple_repeat 1 44 0 4 991 843 64 0 0 chr15 53305138 53305248 -50189726 + (TG)n Simple_repeat Simple_repeat 1 110 0 4 991 252 257 92 26 chr15 53305251 53305327 -50189647 + MER3 DNA MER1_type 34 114 -95 4 991 219 69 0 0 chr15 53305329 53305358 -50189616 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 991 773 290 18 43 chr15 53305428 53305709 -50189265 - B4A SINE B4 -16 276 3 4 991 362 335 78 16 chr15 53307381 53307572 -50187402 - B3 SINE B2 -13 203 1 4 991 502 268 16 39 chr15 53307593 53307721 -50187253 - B1_Mur1 SINE Alu -13 136 12 4 991 834 297 29 68 chr15 53307817 53308232 -50186742 + Lx9 LINE L1 7030 7428 -216 4 991 351 238 144 54 chr15 53308259 53308370 -50186604 - B3A SINE B2 -76 122 2 4 991 346 262 24 0 chr15 53308689 53308773 -50186201 - PB1D10 SINE Alu -21 96 11 4 991 1638 32 43 0 chr15 53308796 53308981 -50185993 - B2_Mm1a SINE B2 0 193 1 4 991 3771 48 4 0 chr15 53309722 53310178 -50184796 + L1Md_F2 LINE L1 5129 5586 -297 5 991 8286 60 1 5 chr15 53310178 53311166 -50183808 + L1Md_F2 LINE L1 5587 6570 -12 5 991 303 28 0 0 chr15 53311177 53311213 -50183761 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 991 210 143 0 0 chr15 53311459 53311494 -50183480 + (TC)n Simple_repeat Simple_repeat 1 35 0 5 991 2390 190 5 7 chr15 53311512 53311931 -50183043 - MTC LTR MaLR 0 421 4 5 991 1314 271 192 19 chr15 53311959 53312527 -50182447 - Kanga1c DNA Tc2 -57 672 7 5 991 1233 82 0 0 chr15 53312646 53312804 -50182170 + B2_Mm2 SINE B2 1 158 -37 5 991 338 355 144 52 chr15 53313072 53313399 -50181575 + MLT1G1 LTR MaLR 216 572 -7 5 991 721 80 0 0 chr15 53313518 53313618 -50181356 + L1Md_F2 LINE L1 6401 6500 -82 5 991 547 328 59 13 chr15 53313735 53313973 -50181001 + Lx8 LINE L1 7093 7341 -132 5 991 730 171 57 0 chr15 53314361 53314484 -50180490 + B1_Mur3 SINE Alu 2 131 -18 5 991 940 193 28 73 chr15 53314574 53314792 -50180182 + B3 SINE B2 2 209 -7 5 991 1074 95 29 0 chr15 53314801 53314938 -50180036 + B1_Mus1 SINE Alu 2 142 -6 5 991 486 0 0 0 chr15 53314944 53314998 -50179976 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 5 991 22 0 0 0 chr15 53315422 53315444 -50179530 + AT_rich Low_complexity Low_complexity 1 22 0 5 991 668 305 42 9 chr15 53315580 53315792 -50179182 + MER58A DNA MER1_type 6 224 0 5 991 231 248 65 114 chr15 53316092 53316215 -50178759 + Tigger15a DNA TcMar 599 715 0 5 991 601 273 0 0 chr15 53316401 53316529 -50178445 - ID_B1 SINE B4 -6 218 91 5 991 24 53 0 0 chr15 53316714 53316752 -50178222 + AT_rich Low_complexity Low_complexity 1 38 0 5 991 251 362 108 64 chr15 53317172 53317423 -50177551 - Charlie10 DNA MER1_type -2554 268 7 5 991 878 289 173 6 chr15 53317427 53317900 -50177074 - L1MA7 LINE L1 0 6291 5740 5 991 312 27 0 0 chr15 53318146 53318183 -50176791 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 991 183 333 26 13 chr15 53318257 53318333 -50176641 - L3 LINE CR1 -3152 1337 1261 5 991 233 314 88 47 chr15 53318468 53318685 -50176289 + MLT1H1 LTR MaLR 4 234 -357 5 991 470 254 0 7 chr15 53319494 53319637 -50175337 + (TA)n Simple_repeat Simple_repeat 2 143 0 5 991 1099 287 100 26 chr15 53319642 53320071 -50174903 - Lx8 LINE L1 -26 7447 6987 5 991 208 147 0 0 chr15 53320190 53320224 -50174750 + (T)n Simple_repeat Simple_repeat 1 34 0 5 991 396 250 113 19 chr15 53322838 53322944 -50172030 - PB1D10 SINE Alu 0 117 2 5 991 224 211 0 66 chr15 53324179 53324240 -50170734 + CT-rich Low_complexity Low_complexity 2 58 0 5 991 531 0 0 0 chr15 53324301 53324360 -50170614 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 5 991 234 310 40 72 chr15 53324698 53324823 -50170151 - L2c LINE L2 -1 3386 3266 5 991 910 316 78 118 chr15 53325594 53326505 -50168469 + Lx8 LINE L1 6599 7473 0 5 991 543 31 0 0 chr15 53326623 53326688 -50168286 + (TCCA)n Simple_repeat Simple_repeat 4 68 0 5 991 1047 112 12 9 chr15 53326728 53326893 -50168081 + L1Md_F2 LINE L1 5440 5615 -829 5 991 8600 45 3 2 chr15 53326893 53327888 -50167086 + L1Md_F2 LINE L1 5587 6582 0 5 991 198 0 0 0 chr15 53328563 53328585 -50166389 + (TTAA)n Simple_repeat Simple_repeat 4 25 0 5 991 210 91 0 0 chr15 53329246 53329279 -50165695 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 5 991 761 274 59 0 chr15 53329577 53329629 -50165345 - B3 SINE B2 0 216 163 5 991 405 0 0 0 chr15 53329629 53329674 -50165300 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 991 761 274 59 0 chr15 53329674 53329825 -50165149 - B3 SINE B2 -54 162 2 5 991 397 301 25 154 chr15 53329890 53330130 -50164844 - B4A SINE B4 -15 277 69 5 991 198 71 0 0 chr15 53330511 53330539 -50164435 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 5 991 534 308 47 42 chr15 53330639 53330829 -50164145 + MLT1J2 LTR MaLR 60 250 -198 5 991 423 0 0 0 chr15 53330976 53331023 -50163951 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 991 180 345 0 114 chr15 53332231 53332362 -50162612 + MIRb SINE MIR 20 135 -133 5 991 657 307 55 15 chr15 53333039 53333310 -50161664 - B4A SINE B4 -10 282 1 5 991 242 315 194 0 chr15 53333332 53333440 -50161534 + L2a LINE L2 3293 3421 -5 5 991 234 0 0 0 chr15 53333597 53333623 -50161351 + (T)n Simple_repeat Simple_repeat 1 26 0 5 991 354 98 0 0 chr15 53334227 53334278 -50160696 + (TCCC)n Simple_repeat Simple_repeat 2 52 0 5 991 193 333 0 53 chr15 53335129 53335205 -50159769 + L3 LINE CR1 4282 4353 -136 5 991 186 315 110 0 chr15 53335355 53335428 -50159546 + MIRc SINE MIR 44 124 -144 5 991 288 70 0 0 chr15 53335849 53335892 -50159082 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 991 449 217 299 15 chr15 53336804 53336969 -50158005 - B3 SINE B2 0 216 7 5 991 21 0 0 0 chr15 53337561 53337582 -50157392 + AT_rich Low_complexity Low_complexity 1 21 0 5 991 337 221 95 81 chr15 53338432 53338447 -50156527 - CYRA11_Mm Unknown Y-chromosome -290 327 178 5 991 600 175 53 53 chr15 53338447 53338580 -50156394 + URR1B DNA MER1_type 86 218 -7 5 991 379 339 115 11 chr15 53338623 53338814 -50156160 + MLT1F1 LTR MaLR 342 552 -17 5 991 443 339 0 0 chr15 53338856 53338983 -50155991 + MIRb SINE MIR 38 164 -104 5 991 809 304 24 72 chr15 53340100 53340391 -50154583 + B4A SINE B4 16 292 0 5 991 495 0 0 0 chr15 53340410 53340465 -50154509 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 991 23 0 0 0 chr15 53340516 53340539 -50154435 + AT_rich Low_complexity Low_complexity 1 23 0 5 991 193 372 10 0 chr15 53340560 53340662 -50154312 + MIRc SINE MIR 19 121 -147 5 991 217 292 0 0 chr15 53341781 53341829 -50153145 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 991 218 106 0 21 chr15 53342010 53342058 -50152916 + (CAAAAA)n Simple_repeat Simple_repeat 3 49 0 5 991 699 12 0 0 chr15 53342728 53342808 -50152166 + (TTA)n Simple_repeat Simple_repeat 1 80 0 5 991 822 178 23 52 chr15 53342825 53342997 -50151977 + B2_Mm2 SINE B2 3 169 -26 5 991 354 290 128 30 chr15 53343861 53344073 -50150901 - MIRc SINE MIR -25 243 17 5 991 185 143 0 54 chr15 53344211 53344248 -50150726 - L3 LINE CR1 -6 4483 4449 5 991 1088 224 101 22 chr15 53345078 53345356 -50149618 - ORR1E LTR MaLR -13 346 47 5 991 1723 171 71 33 chr15 53345371 53345764 -50149210 - Lx4B LINE L1 -4 7054 6647 5 991 274 217 16 16 chr15 53345764 53345825 -50149149 - ORR1E LTR MaLR -298 61 1 5 992 333 262 146 89 chr15 53346496 53346743 -50148231 + ORR1D1 LTR MaLR 101 361 -13 5 992 245 222 278 0 chr15 53347452 53347542 -50147432 + MER117 DNA MER1_type 44 158 -39 5 992 256 156 0 0 chr15 53347615 53347660 -50147314 + MER117 DNA MER1_type 113 157 -40 5 992 234 0 0 0 chr15 53347839 53347865 -50147109 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 5 992 414 0 0 0 chr15 53348095 53348141 -50146833 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 992 879 279 112 19 chr15 53348998 53349265 -50145709 + B4A SINE B4 1 292 0 5 992 221 284 0 22 chr15 53349488 53349578 -50145396 + GA-rich Low_complexity Low_complexity 3 90 0 5 992 324 0 0 0 chr15 53350083 53350119 -50144855 + (T)n Simple_repeat Simple_repeat 1 36 0 5 992 181 355 35 70 chr15 53351318 53351433 -50143541 - MIR3 SINE MIR -45 163 53 5 992 1023 122 0 22 chr15 53351468 53351652 -50143322 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 992 1114 50 0 0 chr15 53351653 53351794 -50143180 - B1_Mm SINE Alu -1 146 6 5 992 462 194 51 141 chr15 53351658 53351814 -50143160 - B4A SINE B4 -71 221 80 5 992 240 247 100 88 chr15 53352982 53353062 -50141912 - ID4 SINE ID 0 83 3 5 992 580 293 101 35 chr15 53355021 53355219 -50139755 + B4A SINE B4 82 292 0 5 992 244 342 146 26 chr15 53357409 53357601 -50137373 + Tigger15a DNA TcMar 189 403 -312 5 992 426 280 64 103 chr15 53357763 53357966 -50137008 + MER20 DNA MER1_type 23 217 -2 5 992 3635 54 17 8 chr15 53358192 53358660 -50136314 - L1Md_F2 LINE L1 -2 6580 6109 5 992 4368 46 1 1 chr15 53358660 53359448 -50135526 + L1Md_F2 LINE L1 5370 6157 -425 5 992 530 279 95 67 chr15 53359907 53360191 -50134783 - B4A SINE B4 0 292 1 5 992 207 0 0 0 chr15 53360359 53360382 -50134592 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 992 1325 85 15 36 chr15 53360396 53360591 -50134383 + B2_Mm2 SINE B2 1 191 -4 5 992 785 180 0 6 chr15 53360594 53360762 -50134212 + CT-rich Low_complexity Low_complexity 2 168 0 5 992 555 346 19 0 chr15 53360779 53360938 -50134036 - RSINE1 SINE B4 -2 163 2 5 992 219 294 11 76 chr15 53361435 53361527 -50133447 + L2b LINE L2 3290 3375 0 5 992 218 321 49 0 chr15 53362230 53362311 -50132663 - MIR SINE MIR -78 184 100 5 992 244 208 0 40 chr15 53362312 53362387 -50132587 + T-rich Low_complexity Low_complexity 2 73 0 5 992 689 267 28 28 chr15 53363585 53363801 -50131173 - B3 SINE B2 0 216 1 5 992 219 254 0 33 chr15 53363913 53363974 -50131000 + CT-rich Low_complexity Low_complexity 2 60 0 5 992 1046 111 12 0 chr15 53363977 53364149 -50130825 + (TTTC)n Simple_repeat Simple_repeat 1 174 0 5 992 182 62 0 30 chr15 53364856 53364889 -50130085 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 992 1115 82 0 20 chr15 53364909 53365059 -50129915 - B1_Mus1 SINE Alu 0 148 2 5 992 273 239 14 0 chr15 53365455 53365526 -50129448 + (CAA)n Simple_repeat Simple_repeat 1 72 0 5 992 460 38 0 81 chr15 53366901 53366987 -50127987 + Lx3_Mus LINE L1 6931 7009 0 5 992 737 279 191 13 chr15 53367071 53367781 -50127193 + L1MA9 LINE L1 5441 6289 -2 5 992 495 87 0 0 chr15 53368384 53368453 -50126521 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 992 931 274 64 11 chr15 53368776 53369134 -50125840 + MTEa LTR MaLR 3 379 0 6 992 213 39 0 0 chr15 53369310 53369336 -50125638 + (CG)n Simple_repeat Simple_repeat 2 27 0 6 992 1128 109 0 0 chr15 53369336 53369510 -50125464 + (CA)n Simple_repeat Simple_repeat 1 175 0 6 992 2695 271 82 93 chr15 53370428 53370740 -50124234 + Lx7 LINE L1 5861 6190 -1506 6 992 242 317 12 0 chr15 53370740 53370822 -50124152 - RMER12 LTR ERVK -495 827 745 6 992 2695 271 82 93 chr15 53370822 53371668 -50123306 + Lx7 LINE L1 6191 7087 -609 6 992 359 270 14 0 chr15 53371681 53371829 -50123145 + Lx7 LINE L1 7263 7412 -284 6 992 247 121 17 17 chr15 53372674 53372733 -50122241 + (CAAA)n Simple_repeat Simple_repeat 1 59 0 6 992 1494 233 53 22 chr15 53374520 53374636 -50120338 - MTD LTR MaLR -15 404 289 6 992 1907 202 62 10 chr15 53374636 53375036 -50119938 - MTC LTR MaLR 0 421 1 6 992 1494 233 53 22 chr15 53375036 53375275 -50119699 - MTD LTR MaLR -131 288 38 6 992 227 354 53 47 chr15 53375574 53375764 -50119210 - B3A SINE B2 -4 194 4 6 992 549 353 72 22 chr15 53375767 53376232 -50118742 - L1M5 LINE L1 -2449 3697 3211 6 992 227 347 39 20 chr15 53376531 53376684 -50118290 - L1M5 LINE L1 -3361 2785 2630 6 992 1113 121 27 3 chr15 53377029 53377202 -50117772 - B2_Mm2 SINE B2 -14 184 1 6 992 472 89 50 0 chr15 53377624 53377725 -50117249 + (TCTA)n Simple_repeat Simple_repeat 3 108 0 6 992 1531 190 127 3 chr15 53381293 53381662 -50113312 + MTD LTR MaLR 5 419 0 6 992 187 326 52 21 chr15 53381778 53381875 -50113099 - MIRm SINE MIR -7 201 102 6 992 201 262 16 0 chr15 53383437 53383498 -50111476 + (TATATG)n Simple_repeat Simple_repeat 3 64 0 6 992 334 204 21 0 chr15 53383503 53383596 -50111378 + (CATA)n Simple_repeat Simple_repeat 4 98 0 6 992 253 68 0 43 chr15 53383606 53383652 -50111322 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 6 992 180 231 0 0 chr15 53383669 53383721 -50111253 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 6 992 3771 52 2 0 chr15 53384915 53385377 -50109597 - L1_Mus1 LINE L1 -1 6566 6104 6 992 1534 216 44 84 chr15 53386159 53386709 -50108265 - RLTR11A LTR ERVK 0 528 1 6 992 23 33 0 0 chr15 53386811 53386841 -50108133 + AT_rich Low_complexity Low_complexity 1 30 0 6 992 4746 76 0 2 chr15 53386899 53387519 -50107455 - L1_Mus1 LINE L1 0 6567 5949 6 992 29 0 0 0 chr15 53388581 53388610 -50106364 + AT_rich Low_complexity Low_complexity 1 29 0 6 992 1147 81 0 7 chr15 53388610 53388759 -50106215 + B1_Mus1 SINE Alu 1 148 0 6 992 1375 85 16 11 chr15 53388783 53388973 -50106001 - B2_Mm2 SINE B2 -4 191 1 6 992 642 26 0 0 chr15 53388993 53389069 -50105905 + (CAAAA)n Simple_repeat Simple_repeat 2 77 0 6 992 609 82 0 0 chr15 53389159 53389256 -50105718 + (CA)n Simple_repeat Simple_repeat 1 97 0 6 992 315 0 0 0 chr15 53389437 53389472 -50105502 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 992 35 54 0 0 chr15 53389553 53389609 -50105365 + AT_rich Low_complexity Low_complexity 1 56 0 6 992 191 320 38 19 chr15 53390387 53390492 -50104482 - MIRb SINE MIR -70 198 92 6 992 774 226 5 106 chr15 53390549 53390767 -50104207 - B3A SINE B2 0 198 3 6 992 530 54 14 0 chr15 53392155 53392229 -50102745 + (CA)n Simple_repeat Simple_repeat 2 76 0 6 992 743 214 0 19 chr15 53393662 53393677 -50101297 - URR1A DNA MER1_type -6 220 206 6 992 2727 47 3 6 chr15 53393677 53394023 -50100951 - L1_Mus1 LINE L1 0 6567 6223 6 992 743 214 0 19 chr15 53394023 53394169 -50100805 - URR1A DNA MER1_type -21 205 63 6 992 657 184 226 17 chr15 53394265 53394446 -50100528 - B3 SINE B2 0 216 20 6 992 26 30 0 0 chr15 53394913 53394946 -50100028 + AT_rich Low_complexity Low_complexity 1 33 0 6 992 327 252 5 4 chr15 53395324 53395395 -50099579 + ID4 SINE ID 3 72 -80 6 992 495 0 0 0 chr15 53395395 53395450 -50099524 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 992 273 287 39 29 chr15 53395450 53395482 -50099492 + BC1_Mm scRNA scRNA 73 107 -45 6 992 180 0 0 0 chr15 53395562 53395582 -50099392 + (A)n Simple_repeat Simple_repeat 1 20 0 6 992 372 22 0 0 chr15 53395586 53395631 -50099343 + (CAA)n Simple_repeat Simple_repeat 2 46 0 6 992 2488 69 0 21 chr15 53395958 53396297 -50098677 + L1Md_F2 LINE L1 6251 6582 0 6 992 229 204 0 0 chr15 53396524 53396578 -50098396 + T-rich Low_complexity Low_complexity 1 54 0 6 992 210 37 0 0 chr15 53397697 53397724 -50097250 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 6 992 5991 60 4 13 chr15 53399422 53400206 -50094768 - L1_Mus3 LINE L1 -7 6631 5855 6 992 935 254 132 20 chr15 53400365 53400655 -50094319 + MTE2b LTR MaLR 1 327 -43 6 992 278 388 20 10 chr15 53400726 53400825 -50094149 - PB1D10 SINE Alu -15 102 3 6 992 533 100 11 0 chr15 53400845 53400935 -50094039 + (TCTA)n Simple_repeat Simple_repeat 3 93 0 6 992 345 131 0 0 chr15 53400935 53400996 -50093978 + (TA)n Simple_repeat Simple_repeat 1 61 0 6 992 396 0 0 0 chr15 53401187 53401231 -50093743 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 6 992 2679 60 28 3 chr15 53402261 53402613 -50092361 - L1_Mus2 LINE L1 0 6566 6206 6 992 2149 216 10 24 chr15 53402929 53403346 -50091628 + MTD LTR MaLR 1 411 -8 6 992 365 389 61 3 chr15 53403351 53403712 -50091262 - Lx8 LINE L1 -108 7365 6984 6 992 309 261 43 0 chr15 53404135 53404204 -50090770 - RSINE1 SINE B4 -92 73 2 6 992 457 321 133 11 chr15 53404447 53404815 -50090159 + Helitron1Na_Mam RC Helitron 153 565 -497 6 992 33899 35 0 0 chr15 53405708 53411146 -50083828 + L1Md_T LINE L1 57 5589 -297 6 992 8995 6 0 1 chr15 53411146 53412143 -50082831 + L1Md_T LINE L1 5590 6585 0 6 992 303 271 0 76 chr15 53414206 53414298 -50080676 - RSINE1 SINE B4 -1 164 80 6 992 3478 110 19 2 chr15 53414623 53415150 -50079824 + L1_Mus3 LINE L1 6102 6637 -1 6 992 832 280 63 23 chr15 53415161 53415559 -50079415 - L1MB4 LINE L1 -59 6121 5708 6 992 249 393 74 0 chr15 53415698 53415820 -50079154 + LTR33A LTR ERVL 9 139 -381 6 992 292 346 53 61 chr15 53416240 53416468 -50078506 + MLT1J LTR MaLR 283 508 -4 6 992 218 358 76 60 chr15 53416987 53417171 -50077803 - MER5A DNA MER1_type -2 187 1 6 992 1654 192 16 55 chr15 53417809 53418194 -50076780 + ORR1D1 LTR MaLR 5 374 0 6 992 794 231 253 142 chr15 53418346 53418825 -50076149 - MT2A LTR ERVL -1 532 1 6 992 245 322 33 0 chr15 53419281 53419371 -50075603 + LTR33B LTR ERVL 391 483 -20 6 992 270 353 57 42 chr15 53419538 53419730 -50075244 - MIR SINE MIR -55 207 13 6 992 838 282 25 21 chr15 53420082 53420532 -50074442 - Lx5 LINE L1 -734 6726 6053 6 992 1478 296 28 30 chr15 53420541 53421153 -50073821 + Lx6 LINE L1 6455 7422 -38 6 992 261 118 0 0 chr15 53421153 53421204 -50073770 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 992 315 71 0 0 chr15 53421210 53421252 -50073722 + (GA)n Simple_repeat Simple_repeat 1 42 0 6 992 751 266 17 22 chr15 53421252 53421433 -50073541 + B3 SINE B2 37 216 0 6 992 318 368 36 40 chr15 53422161 53422385 -50072589 + MER58A DNA MER1_type 1 223 -1 6 992 259 311 0 0 chr15 53422967 53423053 -50071921 - BC1_Mm scRNA scRNA -54 98 13 6 992 2162 130 62 9 chr15 53424760 53425101 -50069873 - ORR1B2 LTR MaLR -8 359 1 6 992 947 245 19 5 chr15 53425219 53425428 -50069546 + B3 SINE B2 5 216 0 6 992 213 94 0 0 chr15 53425433 53425465 -50069509 + (GA)n Simple_repeat Simple_repeat 1 32 0 6 992 227 306 16 0 chr15 53425471 53425533 -50069441 + B1F2 SINE Alu 2 64 -85 6 992 357 82 0 0 chr15 53425540 53425589 -50069385 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 6 992 723 208 29 57 chr15 53425590 53425709 -50069265 - B2_Mm2 SINE B2 -14 202 72 6 992 3067 104 32 13 chr15 53425709 53426175 -50068799 + MT2C_Mm LTR ERVL 1 475 0 6 992 723 199 12 60 chr15 53426175 53426243 -50068731 - B2_Mm2 SINE B2 -124 71 4 6 992 350 266 0 12 chr15 53426246 53426326 -50068648 + B1_Mur2 SINE Alu 58 136 -13 6 992 372 43 0 0 chr15 53426328 53426374 -50068600 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 6 992 214 262 0 0 chr15 53426784 53426826 -50068148 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 992 402 294 98 25 chr15 53426826 53427112 -50067862 - L1MD2 LINE L1 -199 6160 5854 6 992 1075 287 60 52 chr15 53427121 53427485 -50067489 + MLT1B LTR MaLR 16 382 -8 6 992 385 330 51 17 chr15 53427524 53427878 -50067096 + L1ME3A LINE L1 5629 5994 -179 6 992 718 303 83 65 chr15 53427883 53428445 -50066529 + RLTR12B LTR ERVK 1 525 -3 6 992 701 290 17 6 chr15 53428633 53428810 -50066164 - B4A SINE B4 -113 179 1 6 992 358 333 50 62 chr15 53429068 53429247 -50065727 + MIR SINE MIR 17 193 -69 6 992 413 300 106 7 chr15 53430089 53430230 -50064744 + MLT1J1 LTR MaLR 1 155 -289 6 992 293 345 116 7 chr15 53430260 53430406 -50064568 + MLT1J1 LTR MaLR 283 444 0 6 992 3447 33 0 0 chr15 53430841 53431237 -50063737 + MTA_Mm LTR MaLR 1 396 0 6 992 330 129 0 0 chr15 53431722 53431784 -50063190 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 992 417 236 32 8 chr15 53432744 53432868 -50062106 - L1MA9 LINE L1 -14 6298 6172 6 992 339 130 0 0 chr15 53432869 53432923 -50062051 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 992 361 306 142 37 chr15 53433005 53433107 -50061867 - MER2 DNA MER2_type 0 345 226 6 992 237 108 0 0 chr15 53433107 53433144 -50061830 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 992 361 306 142 37 chr15 53433144 53433231 -50061743 - MER2 DNA MER2_type -120 225 138 6 992 306 0 0 0 chr15 53433777 53433811 -50061163 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 992 321 82 0 0 chr15 53434022 53434071 -50060903 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 992 810 130 0 0 chr15 53434066 53434197 -50060777 + (GA)n Simple_repeat Simple_repeat 1 131 0 6 992 351 151 0 27 chr15 53434958 53435033 -50059941 - Lx4A LINE L1 -1 7057 6985 6 992 1609 187 70 6 chr15 53435033 53435345 -50059629 - MTC LTR MaLR -88 333 2 6 992 256 48 46 46 chr15 53435667 53435732 -50059242 + (TATAA)n Simple_repeat Simple_repeat 5 69 0 7 992 21 36 0 0 chr15 53436304 53436332 -50058642 + AT_rich Low_complexity Low_complexity 1 28 0 7 992 29 60 0 0 chr15 53436410 53436460 -50058514 + AT_rich Low_complexity Low_complexity 1 50 0 7 992 1625 112 70 4 chr15 53436460 53436730 -50058244 + Lx2 LINE L1 6709 6996 -1 7 992 309 158 0 35 chr15 53437233 53437318 -50057656 + CT-rich Low_complexity Low_complexity 3 84 0 7 992 220 302 87 56 chr15 53437318 53437376 -50057598 - ID_B1 SINE B4 -85 139 10 7 992 298 279 15 0 chr15 53437376 53437444 -50057530 - ID4 SINE ID -5 78 10 7 992 254 309 0 0 chr15 53437449 53437517 -50057457 - PB1D10 SINE Alu -8 109 42 7 992 191 36 36 0 chr15 53438528 53438556 -50056418 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7 992 291 54 0 0 chr15 53438948 53438985 -50055989 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 992 682 178 22 0 chr15 53440247 53440382 -50054592 + Lx9 LINE L1 7324 7461 -183 7 992 497 44 15 0 chr15 53440403 53440471 -50054503 + (CA)n Simple_repeat Simple_repeat 2 70 0 7 992 506 131 40 0 chr15 53440471 53440570 -50054404 + Lx9 LINE L1 7540 7642 -2 7 992 755 57 9 0 chr15 53442480 53442585 -50052389 + (TTTTC)n Simple_repeat Simple_repeat 3 108 0 7 992 359 313 81 0 chr15 53442586 53442685 -50052289 - PB1D7 SINE Alu -7 113 7 7 992 2889 230 70 21 chr15 53443415 53444423 -50050551 - RMER1A Other Other -14 1052 1 7 992 401 272 43 20 chr15 53445749 53445883 -50049091 + L2c LINE L2 3276 3416 -10 7 992 209 94 0 0 chr15 53445855 53445887 -50049087 - L2a LINE L2 0 3426 3395 7 992 1171 262 53 10 chr15 53446239 53446543 -50048431 - MER2 DNA MER2_type 0 345 29 7 992 289 385 79 52 chr15 53446883 53447135 -50047839 - MLT1H1 LTR MaLR -288 267 9 7 992 298 306 66 0 chr15 53447207 53447328 -50047646 - MLT1B LTR MaLR -19 371 243 7 992 194 330 28 37 chr15 53448703 53448810 -50046164 + MIR3 SINE MIR 54 159 -49 7 992 205 333 167 0 chr15 53449463 53449565 -50045409 + MIRb SINE MIR 68 186 -82 7 992 189 358 49 24 chr15 53449930 53450053 -50044921 - MIRb SINE MIR -9 259 134 7 992 738 0 0 0 chr15 53450495 53450577 -50044397 + (GAA)n Simple_repeat Simple_repeat 2 83 0 7 992 32 57 0 0 chr15 53451130 53451183 -50043791 + AT_rich Low_complexity Low_complexity 1 53 0 7 992 1218 339 57 11 chr15 53451510 53451984 -50042990 - MER68 LTR ERVL -12 551 56 7 992 374 139 12 0 chr15 53451984 53452070 -50042904 + (CCAA)n Simple_repeat Simple_repeat 1 87 0 7 992 275 305 59 30 chr15 53452153 53452288 -50042686 - MER103 DNA DNA -23 143 5 7 992 311 0 26 0 chr15 53452301 53452340 -50042634 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 7 992 292 228 81 71 chr15 53452636 53452735 -50042239 + MIR SINE MIR 59 158 -104 7 992 614 315 47 5 chr15 53452778 53452992 -50041982 + B4A SINE B4 2 224 -68 7 992 381 22 0 0 chr15 53453015 53453061 -50041913 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 992 263 89 0 111 chr15 53454304 53454393 -50040581 + L1_Mus1 LINE L1 6512 6567 0 7 992 262 340 19 32 chr15 53454720 53454875 -50040099 + MIR SINE MIR 81 233 -29 7 992 222 333 0 0 chr15 53455363 53455420 -50039554 + ID4 SINE ID 25 81 -2 7 992 186 43 0 0 chr15 53455665 53455688 -50039286 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 7 992 6146 70 13 12 chr15 53455690 53456515 -50038459 - L1_Mus1 LINE L1 -4 6563 5738 7 992 1139 99 0 0 chr15 53456515 53456676 -50038298 + L1_Mus1 LINE L1 5534 5694 -189 7 992 4313 60 0 0 chr15 53456671 53457411 -50037563 - L1Md_F2 LINE L1 -450 6132 5393 7 992 287 206 15 31 chr15 53457476 53457541 -50037433 + MLT1K LTR MaLR 526 589 -6 7 992 326 256 51 0 chr15 53458523 53458601 -50036373 + B4A SINE B4 2 83 -209 7 992 299 233 82 64 chr15 53458599 53458709 -50036265 + MLT1A1 LTR MaLR 228 339 -69 7 992 6493 101 6 10 chr15 53458720 53459718 -50035256 - Lx LINE L1 -12 6642 5649 7 992 21 57 0 0 chr15 53460213 53460248 -50034726 + AT_rich Low_complexity Low_complexity 1 35 0 7 992 31 0 0 0 chr15 53460325 53460356 -50034618 + AT_rich Low_complexity Low_complexity 1 31 0 7 992 352 138 25 0 chr15 53460356 53460436 -50034538 - L1Md_F3 LINE L1 -2 6582 6501 7 992 520 267 37 22 chr15 53460511 53460638 -50034336 - Lx9 LINE L1 0 7644 7512 7 992 225 0 0 0 chr15 53460638 53460663 -50034311 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 992 520 267 37 22 chr15 53460663 53460803 -50034171 - Lx9 LINE L1 -133 7511 7373 7 992 459 323 85 16 chr15 53460964 53461153 -50033821 - MER3 DNA MER1_type 0 209 8 7 992 298 365 44 29 chr15 53461942 53462148 -50032826 - MIR SINE MIR -49 213 5 7 992 202 236 0 52 chr15 53462709 53462767 -50032207 + (TATG)n Simple_repeat Simple_repeat 1 55 0 7 992 738 333 18 61 chr15 53462767 53463045 -50031929 - B4A SINE B4 0 292 27 7 992 389 322 8 24 chr15 53463135 53463259 -50031715 - RSINE1 SINE B4 -43 122 1 7 992 806 310 18 29 chr15 53463399 53463678 -50031296 + MLT1B LTR MaLR 113 388 -2 7 992 391 323 68 16 chr15 53463860 53464052 -50030922 + MIR SINE MIR 61 262 0 7 992 257 224 22 56 chr15 53464299 53464389 -50030585 - Lx2B LINE L1 -1132 5868 5746 7 992 26 0 0 0 chr15 53465763 53465789 -50029185 + AT_rich Low_complexity Low_complexity 1 26 0 7 992 1063 308 144 24 chr15 53466118 53466667 -50028307 - MLT1E1 LTR MaLR -16 638 24 7 992 538 285 83 51 chr15 53466731 53467290 -50027684 - L1MB7 LINE L1 -30 6144 5589 7 992 491 371 74 30 chr15 53467439 53467845 -50027129 + MLT1D LTR MaLR 1 424 -81 7 992 201 278 13 40 chr15 53468258 53468333 -50026641 - L2c LINE L2 -5 3382 3310 7 992 340 171 13 0 chr15 53468554 53468630 -50026344 - Lx4A LINE L1 -5 7053 6977 7 992 625 25 0 0 chr15 53470119 53470200 -50024774 - L1Md_T LINE L1 0 6582 6502 7 992 851 314 34 26 chr15 53470368 53470742 -50024232 + MLT2B4 LTR ERVL 3 381 -33 7 992 1208 333 85 17 chr15 53470829 53471299 -50023675 + MLT2B2 LTR ERVL 14 515 0 7 992 275 211 45 136 chr15 53473697 53473807 -50021167 - ORR1E LTR MaLR 0 359 260 7 992 323 237 11 0 chr15 53473908 53474001 -50020973 + GA-rich Low_complexity Low_complexity 1 94 0 7 992 550 328 52 31 chr15 53474743 53474935 -50020039 + RMER30 DNA MER1_type 6 201 -1 7 992 2397 81 9 0 chr15 53475015 53475337 -50019637 - ORR1A2 LTR MaLR 0 327 3 7 992 294 369 39 0 chr15 53475688 53475791 -50019183 - B3A SINE B2 -38 160 54 7 992 240 338 0 24 chr15 53476701 53476783 -50018191 + ID4 SINE ID 3 82 -1 7 992 317 159 0 16 chr15 53476850 53476914 -50018060 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 993 252 0 0 0 chr15 53477656 53477684 -50017290 + (TC)n Simple_repeat Simple_repeat 1 28 0 7 993 186 103 0 0 chr15 53477685 53477714 -50017260 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 993 263 252 23 45 chr15 53478027 53478160 -50016814 - L1MB1 LINE L1 0 6171 6042 7 993 646 284 109 21 chr15 53478232 53478847 -50016127 - L1MB1 LINE L1 -304 5864 5195 7 993 1265 287 94 36 chr15 53479188 53480276 -50014698 + L1M2 LINE L1 4287 5441 -738 7 993 1319 178 311 15 chr15 53480273 53480658 -50014316 + Lx9 LINE L1 7145 7643 -1 7 993 241 235 29 48 chr15 53480666 53480769 -50014205 + Lx4B LINE L1 6896 7050 -8 7 993 627 279 26 7 chr15 53480861 53481050 -50013924 + B3A SINE B2 21 216 0 7 993 489 316 30 54 chr15 53481080 53481247 -50013727 + RSINE1 SINE B4 2 164 -1 7 993 24 32 0 0 chr15 53481257 53481288 -50013686 + AT_rich Low_complexity Low_complexity 1 31 0 7 993 315 300 90 19 chr15 53481314 53481637 -50013337 + L1M2 LINE L1 5479 5824 -473 7 993 321 267 35 0 chr15 53481711 53481827 -50013147 + Lx8 LINE L1 5783 5902 -1571 7 993 464 0 18 0 chr15 53481832 53481888 -50013086 + (TCTA)n Simple_repeat Simple_repeat 3 59 0 7 993 495 0 0 0 chr15 53482787 53482842 -50012132 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 993 219 88 0 0 chr15 53483590 53483624 -50011350 + (CAAAAA)n Simple_repeat Simple_repeat 1 34 0 7 993 8611 107 46 10 chr15 53483655 53486076 -50008898 + Lx3B LINE L1 4474 6970 -3 7 993 531 292 8 16 chr15 53486177 53486299 -50008675 + B4A SINE B4 1 121 -171 7 993 732 92 0 0 chr15 53486325 53486444 -50008530 + (TC)n Simple_repeat Simple_repeat 2 120 0 7 993 459 348 66 12 chr15 53486463 53486629 -50008345 + B4A SINE B4 118 292 0 7 993 547 265 176 34 chr15 53486727 53486989 -50007985 + MLT1A LTR MaLR 24 322 -52 7 993 1223 259 99 12 chr15 53486994 53487338 -50007636 + MTEa LTR MaLR 1 374 -5 7 993 21 36 0 0 chr15 53488277 53488305 -50006669 + AT_rich Low_complexity Low_complexity 1 28 0 7 993 911 192 131 0 chr15 53488729 53488927 -50006047 - URR1A DNA MER1_type 0 226 3 7 993 369 356 36 15 chr15 53489514 53489651 -50005323 + MER91C DNA Tip100 1 140 0 7 993 285 29 0 0 chr15 53490467 53490501 -50004473 + (T)n Simple_repeat Simple_repeat 1 34 0 7 993 228 100 0 0 chr15 53490729 53490769 -50004205 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 7 993 360 207 11 58 chr15 53491486 53491573 -50003401 - PB1D10 SINE Alu -1 116 34 7 993 444 19 0 0 chr15 53491908 53491961 -50003013 + (TC)n Simple_repeat Simple_repeat 2 54 0 7 993 180 0 0 0 chr15 53491961 53491980 -50002994 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 993 337 317 321 19 chr15 53492177 53492491 -50002483 + MLT1D LTR MaLR 62 469 -36 7 993 632 275 55 41 chr15 53492590 53492882 -50002092 + Lx8 LINE L1 7144 7439 -34 7 993 3635 41 9 0 chr15 53492979 53493420 -50001554 - L1Md_F3 LINE L1 -14 6570 6126 7 993 4335 45 4 0 chr15 53493420 53494172 -50000802 + L1Md_F3 LINE L1 5384 6138 -446 7 993 268 333 0 0 chr15 53495281 53495356 -49999618 + MLT2B4 LTR ERVL 3 77 -479 8 993 784 312 65 8 chr15 53495500 53495856 -49999118 - Lx9 LINE L1 -172 7472 7097 8 993 626 247 58 0 chr15 53495854 53496028 -49998946 + Lx9 LINE L1 6867 7050 -594 8 993 348 24 0 0 chr15 53496276 53496317 -49998657 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 993 480 332 59 23 chr15 53496773 53496992 -49997982 - MLT1D LTR MaLR -1 504 278 8 993 1174 68 0 0 chr15 53497043 53497189 -49997785 + B1_Mm SINE Alu 2 147 0 8 993 237 98 0 0 chr15 53497189 53497230 -49997744 + (A)n Simple_repeat Simple_repeat 1 41 0 8 993 237 321 0 0 chr15 53498250 53498306 -49996668 - MIRb SINE MIR -23 245 190 8 993 1238 258 24 55 chr15 53498497 53498879 -49996095 + ORR1D2 LTR MaLR 1 370 0 8 993 232 361 66 88 chr15 53499815 53499997 -49994977 + MLT1K LTR MaLR 221 398 -197 8 993 320 241 157 0 chr15 53500036 53500144 -49994830 + MLT1K LTR MaLR 400 524 -71 1 993 270 0 0 0 chr15 53500570 53500600 -49994374 + (T)n Simple_repeat Simple_repeat 1 30 0 2 993 290 309 0 0 chr15 53501134 53501231 -49993743 + Lx6 LINE L1 7199 7295 -165 3 993 24 53 0 0 chr15 53501823 53501861 -49993113 + AT_rich Low_complexity Low_complexity 1 38 0 4 993 426 315 72 52 chr15 53502662 53502856 -49992118 - MER20 DNA MER1_type -21 198 1 5 993 1358 90 0 5 chr15 53503097 53503286 -49991688 + B2_Mm2 SINE B2 1 188 -7 6 993 384 40 0 0 chr15 53503507 53503557 -49991417 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 993 295 334 41 25 chr15 53503877 53504019 -49990955 + MIRm SINE MIR 24 167 -101 8 993 23 68 0 0 chr15 53504057 53504101 -49990873 + AT_rich Low_complexity Low_complexity 1 44 0 9 993 873 76 0 0 chr15 53504749 53504867 -49990107 + (GGAA)n Simple_repeat Simple_repeat 3 120 0 1 993 188 366 71 84 chr15 53504886 53505208 -49989766 - L2 LINE L2 -417 3002 2685 1 993 2538 194 60 20 chr15 53505386 53505846 -49989128 + RLTR20B3 LTR ERVK 1 471 -106 1 993 369 0 0 0 chr15 53505846 53505887 -49989087 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 993 2538 194 60 20 chr15 53505887 53505962 -49989012 + RLTR20B3 LTR ERVK 472 556 -21 1 993 303 378 9 23 chr15 53506631 53506839 -49988135 - MIRb SINE MIR -66 202 1 1 993 242 266 95 27 chr15 53507010 53507157 -49987817 + L1MA10 LINE L1 6169 6325 -9 1 993 273 361 122 27 chr15 53507311 53507390 -49987584 + LTR16A LTR ERVL 27 117 -334 1 993 248 0 31 0 chr15 53507390 53507422 -49987552 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 993 273 361 122 27 chr15 53507422 53507490 -49987484 + LTR16A LTR ERVL 118 188 -263 1 993 305 298 51 117 chr15 53507733 53507870 -49987104 + LTR16A LTR ERVL 239 366 -85 1 993 355 188 16 0 chr15 53507890 53507954 -49987020 + MTEa LTR MaLR 2 66 -313 1 993 429 250 0 0 chr15 53507990 53508070 -49986904 + MTEa LTR MaLR 156 235 -144 1 993 4577 112 12 23 chr15 53508070 53508821 -49986153 + Lx2 LINE L1 5880 6622 -375 1 993 496 250 125 125 chr15 53508821 53508842 -49986132 + ORR1C2 LTR MaLR 27 48 -298 2 993 1496 106 0 22 chr15 53508842 53509074 -49985900 + Lx LINE L1 6427 6653 -1 2 993 692 240 163 78 chr15 53509074 53509195 -49985779 + ORR1C2 LTR MaLR 49 189 -195 2 993 519 17 0 0 chr15 53509195 53509255 -49985719 + (TC)n Simple_repeat Simple_repeat 2 61 0 2 993 692 235 183 55 chr15 53509255 53509431 -49985543 + ORR1C2 LTR MaLR 190 383 -1 2 993 23 33 0 0 chr15 53512635 53512665 -49982309 + AT_rich Low_complexity Low_complexity 1 30 0 2 993 371 310 54 30 chr15 53514175 53514378 -49980596 + L1ME3 LINE L1 5939 6146 -16 2 993 237 355 17 17 chr15 53514384 53514466 -49980508 + polypurine Low_complexity Low_complexity 1 83 0 2 993 414 0 0 0 chr15 53514466 53514512 -49980462 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 993 237 355 17 17 chr15 53514512 53514635 -49980339 + polypurine Low_complexity Low_complexity 1 123 0 2 993 717 294 82 39 chr15 53515163 53515443 -49979531 - B4A SINE B4 0 292 1 2 993 272 328 0 0 chr15 53515446 53515513 -49979461 - tRNA-Ala-GCY_ tRNA tRNA -8 67 1 2 993 275 339 55 11 chr15 53515694 53515833 -49979141 + MIRm SINE MIR 5 147 -129 3 993 1302 161 48 264 chr15 53516053 53516535 -49978439 + ORR1C1 LTR MaLR 1 378 0 3 993 558 284 33 47 chr15 53517218 53517432 -49977542 - B3 SINE B2 -3 213 3 3 993 598 336 157 55 chr15 53517839 53518330 -49976644 + MLT1H1 LTR MaLR 9 549 -6 3 993 450 272 259 6 chr15 53519318 53519492 -49975482 + ID_B1 SINE B4 2 219 -5 3 993 215 298 59 12 chr15 53522257 53522342 -49972632 + L2b LINE L2 3287 3375 0 3 993 486 108 0 0 chr15 53524908 53524982 -49969992 + (TG)n Simple_repeat Simple_repeat 1 74 0 3 993 268 321 0 35 chr15 53525508 53525595 -49969379 + MER58A DNA MER1_type 1 84 -140 3 993 446 202 0 0 chr15 53526917 53527006 -49967968 + RLTR14-int LTR ERV1 839 927 -4390 3 993 299 44 22 0 chr15 53527356 53527401 -49967573 + (CAA)n Simple_repeat Simple_repeat 1 46 0 3 993 262 291 119 14 chr15 53528560 53528703 -49966271 + RLTR14-int LTR ERV1 2932 3089 -2228 3 993 547 302 57 48 chr15 53528707 53529075 -49965899 + RLTR4_MM-int LTR ERV1 4831 5294 -2484 4 993 198 0 0 0 chr15 53530840 53530862 -49964112 + (A)n Simple_repeat Simple_repeat 1 22 0 4 993 324 0 0 0 chr15 53530875 53530911 -49964063 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 4 993 1121 76 0 0 chr15 53530911 53531056 -49963918 - B1_Mus2 SINE Alu -1 146 2 4 993 486 269 76 49 chr15 53531158 53531486 -49963488 + RLTR14-int LTR ERV1 4981 5317 0 3 993 846 257 110 36 chr15 53531486 53531842 -49963132 + RLTR14 LTR ERV1 1 382 0 3 993 275 328 53 38 chr15 53532444 53532577 -49962397 + MIR SINE MIR 98 232 -30 4 993 234 300 85 64 chr15 53533184 53533419 -49961555 - Lx8 LINE L1 -55 7418 7179 4 993 239 299 88 27 chr15 53533450 53533583 -49961391 - ORR1E LTR MaLR -219 146 1 4 993 395 241 41 47 chr15 53534603 53534764 -49960210 + B3 SINE B2 37 186 -9 4 993 987 265 117 37 chr15 53534903 53535228 -49959746 + ORR1E LTR MaLR 1 351 -8 4 993 738 223 0 0 chr15 53535537 53535667 -49959307 + B1_Mur3 SINE Alu 4 133 -16 4 993 24 0 0 0 chr15 53535667 53535691 -49959283 + AT_rich Low_complexity Low_complexity 1 24 0 5 993 25 51 0 0 chr15 53536366 53536405 -49958569 + AT_rich Low_complexity Low_complexity 1 39 0 5 993 794 242 24 14 chr15 53536840 53537050 -49957924 + B3 SINE B2 5 216 0 5 993 462 203 0 0 chr15 53537289 53537412 -49957562 + (TG)n Simple_repeat Simple_repeat 2 124 0 5 993 1080 95 0 13 chr15 53538013 53538162 -49956812 + B1_Mus1 SINE Alu 1 147 -1 5 993 366 280 60 19 chr15 53538369 53538584 -49956390 - L1M5 LINE L1 -917 5229 5006 5 993 263 237 91 13 chr15 53538687 53538761 -49956213 - B4A SINE B4 -4 288 209 5 993 579 296 106 0 chr15 53538761 53538950 -49956024 + ORR1D2 LTR MaLR 1 209 -161 5 993 2052 235 144 16 chr15 53538950 53539783 -49955191 + RMER1B Other Other 61 1065 -1 5 993 608 209 77 36 chr15 53539784 53539943 -49955031 + ORR1D2 LTR MaLR 195 350 -9 5 993 385 248 19 9 chr15 53540098 53540204 -49954770 - Lx9 LINE L1 -1686 5958 5852 5 993 396 335 12 0 chr15 53540203 53540373 -49954601 + Lx9 LINE L1 7270 7441 -203 6 993 202 293 26 13 chr15 53540794 53540870 -49954104 - L2c LINE L2 -230 3157 3081 6 993 207 100 0 0 chr15 53541260 53541290 -49953684 + (TCC)n Simple_repeat Simple_repeat 3 32 0 6 993 189 0 0 0 chr15 53541305 53541326 -49953648 + (TTA)n Simple_repeat Simple_repeat 1 21 0 6 993 269 239 0 0 chr15 53542206 53542277 -49952697 - RMER1B Other Other -6 1060 990 6 993 1187 309 14 46 chr15 53542339 53542821 -49952153 - Lx8 LINE L1 -144 7329 6863 6 993 23 0 0 0 chr15 53543786 53543809 -49951165 + AT_rich Low_complexity Low_complexity 1 23 0 6 993 6993 175 54 1 chr15 53543816 53544628 -49950346 - Lx2A1 LINE L1 -9 6999 6158 6 993 189 0 0 0 chr15 53544628 53544649 -49950325 + (TCC)n Simple_repeat Simple_repeat 2 22 0 6 993 6993 180 48 2 chr15 53544649 53545492 -49949482 - Lx2A1 LINE L1 -851 6157 5256 6 993 6309 173 11 2 chr15 53545489 53546702 -49948272 + Lx2A1 LINE L1 4030 5254 -623 6 993 245 277 38 98 chr15 53546703 53546732 -49948242 - LTR37A LTR ERV1 -7 461 437 6 993 478 266 35 28 chr15 53546732 53546875 -49948099 + B1F2 SINE Alu 1 144 -5 7 993 350 297 72 53 chr15 53546875 53547096 -49947878 - LTR37A LTR ERV1 -32 436 163 6 993 443 291 143 0 chr15 53547170 53547373 -49947601 - MER44A DNA MER2_type -71 268 37 7 993 243 181 167 0 chr15 53547426 53547498 -49947476 - LTR37A LTR ERV1 -295 131 48 6 993 256 308 39 0 chr15 53547650 53547728 -49947246 - MIRb SINE MIR -54 214 134 7 993 1168 83 16 11 chr15 53547765 53547948 -49947026 - L1_Mus3 LINE L1 -6 6632 6449 7 993 793 314 5 0 chr15 53548628 53548848 -49946126 - ID_B1 SINE B4 -3 221 1 7 993 27 29 0 0 chr15 53549278 53549312 -49945662 + AT_rich Low_complexity Low_complexity 1 34 0 7 993 489 34 0 0 chr15 53551460 53551519 -49943455 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 993 333 0 0 0 chr15 53551519 53551555 -49943419 + (GA)n Simple_repeat Simple_repeat 2 38 0 7 993 180 0 0 0 chr15 53552064 53552084 -49942890 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 7 993 385 271 113 50 chr15 53552340 53552561 -49942413 + MER113 DNA MER1_type 107 341 -180 7 993 24 32 0 0 chr15 53552575 53552606 -49942368 + AT_rich Low_complexity Low_complexity 1 31 0 8 993 675 239 32 0 chr15 53552819 53552991 -49941983 + ORR1D1 LTR MaLR 1 183 -187 8 993 662 153 12 30 chr15 53553003 53553171 -49941803 + C-rich Low_complexity Low_complexity 2 166 0 8 993 399 258 55 87 chr15 53553199 53553376 -49941598 + ORR1D1 LTR MaLR 201 379 0 8 993 631 403 76 9 chr15 53553452 53553795 -49941179 + MLT1G3 LTR MaLR 51 416 -179 8 993 719 11 0 0 chr15 53555542 53555632 -49939342 + L1Md_T LINE L1 6493 6582 0 8 993 1358 237 71 23 chr15 53557031 53557081 -49937893 - ORR1D1 LTR MaLR -3 371 311 8 993 477 0 0 0 chr15 53557081 53557134 -49937840 + (GA)n Simple_repeat Simple_repeat 1 53 0 8 993 1358 237 71 23 chr15 53557134 53557437 -49937537 - ORR1D1 LTR MaLR -64 310 2 8 993 335 184 26 0 chr15 53557852 53557928 -49937046 + (CATATA)n Simple_repeat Simple_repeat 6 83 0 8 993 869 308 11 44 chr15 53557928 53558200 -49936774 - B4 SINE B4 -22 270 8 8 993 1028 45 32 6 chr15 53558617 53558775 -49936199 + (TCTA)n Simple_repeat Simple_repeat 2 163 0 8 993 244 352 79 16 chr15 53558804 53558931 -49936043 - L3 LINE CR1 -622 3867 3733 9 993 322 287 0 0 chr15 53559348 53559435 -49935539 + (TG)n Simple_repeat Simple_repeat 2 88 0 9 993 193 307 139 29 chr15 53559760 53559968 -49935006 + L2a LINE L2 2255 2485 -934 9 993 291 387 55 38 chr15 53560397 53560741 -49934233 + L2a LINE L2 3076 3425 -1 9 993 218 338 78 37 chr15 53560987 53561205 -49933769 + MIRb SINE MIR 10 236 -32 9 993 267 152 10 61 chr15 53561354 53561452 -49933522 + Lx6 LINE L1 7342 7434 -26 9 993 282 289 0 10 chr15 53563262 53563360 -49931614 + MLT1B LTR MaLR 294 390 0 9 993 1603 208 76 3 chr15 53564914 53565281 -49929693 + ORR1B1 LTR MaLR 1 394 0 9 993 22 0 0 0 chr15 53565307 53565329 -49929645 + AT_rich Low_complexity Low_complexity 1 22 0 9 993 288 148 0 0 chr15 53565604 53565665 -49929309 + (TGGG)n Simple_repeat Simple_repeat 1 61 0 9 993 1143 119 0 0 chr15 53565667 53565843 -49929131 + (TGGA)n Simple_repeat Simple_repeat 3 178 0 9 993 315 303 37 22 chr15 53565913 53566048 -49928926 - HAL1 LINE L1 -850 1657 1521 1 993 240 212 102 34 chr15 53566165 53566253 -49928721 - Lx7 LINE L1 0 7696 7603 1 993 213 108 0 0 chr15 53566271 53566308 -49928666 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 993 437 277 96 86 chr15 53566665 53566911 -49928063 - L1MB3 LINE L1 -111 6072 5825 1 993 723 275 43 0 chr15 53566911 53567118 -49927856 - B3 SINE B2 0 216 1 1 993 437 277 96 86 chr15 53567118 53567195 -49927779 - L1MB3 LINE L1 -359 5824 5746 1 993 198 71 0 0 chr15 53567399 53567427 -49927547 + (T)n Simple_repeat Simple_repeat 1 28 0 1 993 249 311 29 10 chr15 53567443 53567547 -49927427 - L1MB3 LINE L1 -441 5742 5637 1 993 670 320 126 13 chr15 53567615 53567916 -49927058 + MER58B DNA MER1_type 2 336 -5 1 993 319 346 112 33 chr15 53567985 53568350 -49926624 + L2 LINE L2 1837 2230 -1189 1 993 228 154 0 0 chr15 53568460 53568512 -49926462 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 993 192 135 0 0 chr15 53568511 53568548 -49926426 + (GA)n Simple_repeat Simple_repeat 2 38 0 1 993 230 275 38 0 chr15 53568597 53568677 -49926297 + L2 LINE L2 2376 2458 -961 1 993 264 91 0 0 chr15 53570623 53570667 -49924307 + (A)n Simple_repeat Simple_repeat 1 44 0 1 993 1422 56 33 0 chr15 53571964 53572144 -49922830 + B2_Mm1t SINE B2 2 187 -6 1 993 386 356 0 0 chr15 53572738 53572839 -49922135 - PB1D10 SINE Alu -13 104 4 1 993 294 69 34 17 chr15 53573946 53574005 -49920969 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 993 266 73 0 24 chr15 53574140 53574182 -49920792 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 993 309 333 42 25 chr15 53574230 53574350 -49920624 - B1F SINE Alu -13 136 15 1 993 3876 227 34 1 chr15 53574666 53575472 -49919502 + Lx6 LINE L1 6615 7446 -14 1 993 1159 291 62 19 chr15 53575572 53575865 -49919109 + L1MA4A LINE L1 4576 4877 -1266 1 993 477 0 0 0 chr15 53575865 53575918 -49919056 + (CAAAT)n Simple_repeat Simple_repeat 2 54 0 1 993 1159 291 62 19 chr15 53575918 53576250 -49918724 + L1MA4A LINE L1 4878 5228 -915 1 993 206 128 26 0 chr15 53576404 53576443 -49918531 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 1 993 3014 48 8 8 chr15 53576640 53577015 -49917959 - L1Md_F3 LINE L1 -106 5777 5403 1 993 6978 36 3 6 chr15 53577016 53577863 -49917111 + L1Md_F3 LINE L1 5739 6583 -1 1 993 569 271 90 0 chr15 53577874 53578029 -49916945 - B4A SINE B4 -121 171 3 1 993 247 352 56 0 chr15 53578083 53578191 -49916783 - PB1 SINE Alu -2 125 12 1 993 260 330 93 31 chr15 53578277 53578568 -49916406 + L1MA4A LINE L1 5613 5921 -382 1 993 222 304 87 19 chr15 53580519 53580623 -49914351 + MIRc SINE MIR 9 119 -149 1 993 1575 158 56 40 chr15 53581954 53582278 -49912696 + ORR1A4 LTR MaLR 1 329 0 1 993 1544 310 33 31 chr15 53583247 53583799 -49911175 + Lx8 LINE L1 6468 7020 -453 1 993 219 220 0 0 chr15 53585316 53585366 -49909608 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 993 26 0 0 0 chr15 53586103 53586129 -49908845 + AT_rich Low_complexity Low_complexity 1 26 0 1 993 246 175 70 0 chr15 53586251 53586308 -49908666 + (TCTG)n Simple_repeat Simple_repeat 2 62 0 1 993 1549 269 58 28 chr15 53586391 53586927 -49908047 - Lx6 LINE L1 -27 7433 6507 1 993 187 256 23 0 chr15 53587141 53587184 -49907790 - MIRb SINE MIR -91 177 134 1 993 366 23 0 0 chr15 53587454 53587497 -49907477 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 993 271 371 0 0 chr15 53589034 53589177 -49905797 + (TGG)n Simple_repeat Simple_repeat 1 143 0 1 993 207 119 71 0 chr15 53589302 53589344 -49905630 + A-rich Low_complexity Low_complexity 2 46 0 1 993 1179 146 5 9 chr15 53590116 53590331 -49904643 - Lx LINE L1 -2 6652 6439 1 993 396 0 0 0 chr15 53590995 53591039 -49903935 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 993 230 300 16 16 chr15 53591092 53591153 -49903821 - MIR SINE MIR -180 82 22 1 993 447 302 157 35 chr15 53591270 53591500 -49903474 + LTR84b LTR ERVL 2 259 -502 1 993 267 308 162 6 chr15 53593959 53594132 -49900842 - MIR SINE MIR -50 212 13 1 993 347 305 181 33 chr15 53594467 53594807 -49900167 + L2a LINE L2 2815 3206 -220 1 993 260 242 93 21 chr15 53596540 53596637 -49898337 - MIR SINE MIR -55 207 104 1 993 327 255 103 103 chr15 53598340 53598611 -49896363 + L1MA10 LINE L1 6050 6320 -14 1 993 3308 98 16 12 chr15 53599300 53599784 -49895190 + Lx3_Mus LINE L1 6523 7008 -1 1 993 423 307 42 28 chr15 53600386 53600530 -49894444 + MLT1D LTR MaLR 13 158 -347 1 993 2251 50 0 3 chr15 53600628 53600911 -49894063 + L1_Mus1 LINE L1 6285 6566 -1 1 993 558 296 16 8 chr15 53601298 53601424 -49893550 - RSINE1 SINE B4 -33 132 6 1 993 210 174 0 0 chr15 53601429 53601475 -49893499 + T-rich Low_complexity Low_complexity 1 46 0 1 993 563 333 43 91 chr15 53601545 53601799 -49893175 + MLT1D LTR MaLR 255 496 -9 1 993 303 395 70 0 chr15 53601953 53602082 -49892892 - LTR33 LTR ERVL -238 277 140 1 993 192 302 121 15 chr15 53602475 53602605 -49892369 - MIRc SINE MIR -42 166 26 1 993 22 0 0 0 chr15 53602790 53602812 -49892162 + AT_rich Low_complexity Low_complexity 1 22 0 1 993 558 173 0 0 chr15 53602865 53602969 -49892005 + (TA)n Simple_repeat Simple_repeat 2 105 0 1 993 2338 209 42 31 chr15 53603150 53603704 -49891270 + RLTR20B2 LTR ERVK 1 560 0 1 993 2127 50 0 31 chr15 53604038 53604325 -49890649 + L1Md_F2 LINE L1 6293 6570 -12 1 993 1221 41 0 0 chr15 53604838 53604985 -49889989 + B1_Mus2 SINE Alu 1 147 0 1 993 234 0 0 0 chr15 53604985 53605011 -49889963 + (A)n Simple_repeat Simple_repeat 1 26 0 1 993 398 345 16 60 chr15 53605216 53605401 -49889573 - MLT1J LTR MaLR -263 249 73 1 993 333 265 0 58 chr15 53605589 53605693 -49889281 + ORR1D2 LTR MaLR 1 98 -281 1 993 198 0 0 0 chr15 53606275 53606297 -49888677 + (A)n Simple_repeat Simple_repeat 1 22 0 1 993 663 256 75 54 chr15 53606468 53606712 -49888262 + ORR1D2 LTR MaLR 111 373 -6 1 993 22 35 0 0 chr15 53606799 53606828 -49888146 + AT_rich Low_complexity Low_complexity 1 29 0 1 993 369 62 0 0 chr15 53606840 53606888 -49888086 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 993 288 0 0 0 chr15 53606899 53606931 -49888043 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 993 233 233 33 0 chr15 53607079 53607139 -49887835 - L1M5 LINE L1 -524 5654 5593 1 993 341 261 39 70 chr15 53607211 53607339 -49887635 - L1M5 LINE L1 -584 5595 5472 1 994 752 184 19 19 chr15 53608641 53608802 -49886172 - URR1B DNA MER1_type 0 225 65 1 994 700 259 128 56 chr15 53608973 53609223 -49885751 + MLT1D LTR MaLR 168 435 -70 1 994 248 306 149 27 chr15 53610195 53610343 -49884631 + Helitron1Nb_Mam RC Helitron 36 201 -915 1 994 258 360 60 20 chr15 53610446 53610596 -49884378 + MIRb SINE MIR 111 266 -2 1 994 729 323 69 35 chr15 53610940 53611200 -49883774 + B4A SINE B4 12 280 -12 1 994 315 0 0 0 chr15 53611208 53611243 -49883731 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 994 445 131 24 0 chr15 53611261 53611345 -49883629 + (TA)n Simple_repeat Simple_repeat 1 86 0 1 994 263 215 122 16 chr15 53611628 53611751 -49883223 + Helitron1Nb_Mam RC Helitron 969 1104 -12 1 994 468 351 98 63 chr15 53612384 53612731 -49882243 + ORR1E LTR MaLR 1 359 0 1 994 388 57 0 54 chr15 53613593 53613667 -49881307 + (TCTCTG)n Simple_repeat Simple_repeat 3 72 0 1 994 282 248 54 47 chr15 53614080 53614228 -49880746 + L1MA8 LINE L1 6130 6278 -13 1 994 328 284 17 85 chr15 53614592 53614769 -49880205 + RLTR42-int LTR ERVK 1236 1400 -4122 1 994 329 379 11 53 chr15 53614837 53615024 -49879950 + B4A SINE B4 100 278 -14 1 994 348 324 29 10 chr15 53616842 53616945 -49878029 - PB1D10 SINE Alu -11 106 2 1 994 1170 322 93 23 chr15 53617577 53618294 -49876680 - Lx8 LINE L1 -29 7444 6671 1 994 387 0 0 0 chr15 53618294 53618337 -49876637 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 994 1170 322 93 23 chr15 53618337 53618404 -49876570 - Lx8 LINE L1 -803 6670 6605 1 994 415 279 0 14 chr15 53618449 53618587 -49876387 - Lx7 LINE L1 0 7696 7561 1 994 414 0 0 0 chr15 53618710 53618756 -49876218 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 994 228 336 30 74 chr15 53619400 53619535 -49875439 + MLT1D LTR MaLR 260 388 -117 1 994 1109 90 7 0 chr15 53619689 53619834 -49875140 - B1_Mus2 SINE Alu -1 146 1 1 994 443 343 72 39 chr15 53620004 53620283 -49874691 + MLT1J LTR MaLR 216 503 -9 1 994 785 357 74 13 chr15 53622403 53622865 -49872109 - Tigger10 DNA Tigger -561 1282 793 1 994 459 307 36 0 chr15 53623405 53623542 -49871432 + B1_Mur2 SINE Alu 2 143 -6 1 994 1013 265 176 17 chr15 53623939 53624285 -49870689 - MTD LTR MaLR -1 418 18 1 994 230 296 0 18 chr15 53624342 53624397 -49870577 - ID4_ SINE ID -28 55 2 1 994 24 32 0 0 chr15 53625458 53625489 -49869485 + AT_rich Low_complexity Low_complexity 1 31 0 1 994 854 246 242 15 chr15 53625822 53626150 -49868824 - MTD LTR MaLR -2 417 14 1 994 744 308 109 133 chr15 53626150 53626210 -49868764 - MTD-int LTR MaLR 0 1098 1029 1 994 414 0 0 0 chr15 53626210 53626256 -49868718 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 994 666 0 0 0 chr15 53626256 53626329 -49868645 + (GA)n Simple_repeat Simple_repeat 2 75 0 1 994 1756 305 60 70 chr15 53626329 53626395 -49868579 - MTD-int LTR MaLR -143 1115 1064 1 994 1153 35 0 20 chr15 53626395 53626543 -49868431 - B1_Mm SINE Alu -1 146 2 1 994 1756 306 71 84 chr15 53626543 53627538 -49867436 - MTD-int LTR MaLR -195 1063 3 1 994 613 154 16 8 chr15 53627549 53627673 -49867301 + CT-rich Low_complexity Low_complexity 4 128 0 1 994 866 293 108 57 chr15 53627699 53628068 -49866906 - MTD LTR MaLR -31 388 1 1 994 31 0 0 0 chr15 53628210 53628241 -49866733 + AT_rich Low_complexity Low_complexity 1 31 0 1 994 414 0 0 0 chr15 53628309 53628355 -49866619 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 994 219 69 0 0 chr15 53628528 53628557 -49866417 + (A)n Simple_repeat Simple_repeat 1 29 0 1 994 400 62 31 0 chr15 53628570 53628634 -49866340 + (GA)n Simple_repeat Simple_repeat 1 66 0 1 994 617 233 0 8 chr15 53629221 53629355 -49865619 - B1_Mur2 SINE Alu -15 134 2 1 994 248 151 45 23 chr15 53629916 53630004 -49864970 + (TA)n Simple_repeat Simple_repeat 2 91 0 1 994 227 274 195 8 chr15 53630329 53630447 -49864527 - Charlie8 DNA MER1_type -2216 212 73 2 994 21 0 0 0 chr15 53631436 53631457 -49863517 + AT_rich Low_complexity Low_complexity 1 21 0 2 994 731 204 7 33 chr15 53631464 53631616 -49863358 + B1_Mus1 SINE Alu 1 148 0 2 994 322 221 0 54 chr15 53631617 53631746 -49863228 + A-rich Low_complexity Low_complexity 5 126 0 2 994 758 268 126 4 chr15 53632062 53632309 -49862665 - B4A SINE B4 -14 278 2 2 994 372 43 0 0 chr15 53632386 53632432 -49862542 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 2 994 207 323 82 20 chr15 53632678 53632776 -49862198 + MIR SINE MIR 136 239 -23 2 994 1456 65 10 10 chr15 53632905 53633108 -49861866 - L1Md_F2 LINE L1 -14 6568 6366 2 994 186 43 0 0 chr15 53633368 53633391 -49861583 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 994 198 0 0 0 chr15 53635411 53635433 -49859541 + (T)n Simple_repeat Simple_repeat 1 22 0 2 994 450 0 0 0 chr15 53635711 53635761 -49859213 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 994 321 89 0 0 chr15 53636429 53636474 -49858500 + (CAA)n Simple_repeat Simple_repeat 1 45 0 2 994 210 180 0 0 chr15 53637768 53637829 -49857145 + GA-rich Low_complexity Low_complexity 1 61 0 2 994 905 186 60 119 chr15 53638738 53638893 -49856081 - RMER1C Other Other -2 1340 1186 2 994 1052 101 0 6 chr15 53638893 53639072 -49855902 + (GAA)n Simple_repeat Simple_repeat 3 180 0 2 994 905 186 60 119 chr15 53639072 53639252 -49855722 - RMER1C Other Other -157 1185 1025 2 994 845 345 111 58 chr15 53639287 53640248 -49854726 + L2 LINE L2 1828 2839 -580 2 994 1047 230 73 37 chr15 53640751 53641047 -49853927 - Lx9 LINE L1 -1 7643 7322 2 994 198 71 0 0 chr15 53641047 53641075 -49853899 + (TTG)n Simple_repeat Simple_repeat 1 28 0 2 994 1047 230 73 37 chr15 53641075 53641096 -49853878 - Lx9 LINE L1 -323 7321 7311 2 994 234 0 0 0 chr15 53641096 53641122 -49853852 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 994 1047 230 73 37 chr15 53641122 53641186 -49853788 - Lx9 LINE L1 -334 7310 7247 2 994 2855 237 14 4 chr15 53641181 53641875 -49853099 + Lx9 LINE L1 6443 7143 -501 2 994 218 361 149 5 chr15 53642345 53642540 -49852434 - MIR SINE MIR -4 258 36 2 994 373 313 86 63 chr15 53643505 53643856 -49851118 + ORR1E LTR MaLR 1 359 0 2 994 501 71 0 0 chr15 53644303 53644373 -49850601 + (CA)n Simple_repeat Simple_repeat 1 70 0 2 994 1181 96 11 0 chr15 53644775 53644952 -49850022 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 2 994 237 132 0 0 chr15 53644952 53644990 -49849984 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 2 994 1078 113 11 6 chr15 53644990 53645168 -49849806 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 2 994 445 80 27 0 chr15 53645353 53645428 -49849546 + (CA)n Simple_repeat Simple_repeat 2 78 0 2 994 22 0 0 0 chr15 53645668 53645690 -49849284 + AT_rich Low_complexity Low_complexity 1 22 0 2 994 302 253 12 0 chr15 53645763 53645846 -49849128 - L1M5 LINE L1 -312 5812 5729 2 994 5965 37 1 0 chr15 53646084 53646790 -49848184 + L1Md_T LINE L1 5876 6582 0 2 994 21 0 0 0 chr15 53647547 53647568 -49847406 + AT_rich Low_complexity Low_complexity 1 21 0 2 994 239 407 0 15 chr15 53647603 53647753 -49847221 - MIRc SINE MIR -108 168 18 2 994 369 0 0 0 chr15 53649160 53649201 -49845773 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 994 551 232 33 53 chr15 53650103 53650253 -49844721 - MER58A DNA MER1_type -50 174 28 2 994 1459 249 20 43 chr15 53650882 53651326 -49843648 + Lx7 LINE L1 6893 7326 -370 2 994 327 191 0 0 chr15 53654167 53654235 -49840739 + (CAA)n Simple_repeat Simple_repeat 2 69 0 2 994 1191 148 42 5 chr15 53656716 53656933 -49838041 + URR1A DNA MER1_type 1 225 -1 2 994 4471 143 1 6 chr15 53657012 53657741 -49837233 + Lx LINE L1 5917 6642 -12 2 994 339 331 94 47 chr15 53657844 53658015 -49836959 + MLT2C1 LTR ERVL 141 319 -78 2 994 227 323 32 19 chr15 53659362 53659520 -49835454 - L1MEd LINE L1 -5948 171 12 2 994 450 302 93 0 chr15 53659877 53660016 -49834958 + B3A SINE B2 2 153 -45 2 994 399 41 0 0 chr15 53660020 53660069 -49834905 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 994 26 74 0 0 chr15 53660070 53660124 -49834850 + AT_rich Low_complexity Low_complexity 1 54 0 2 994 37669 31 0 1 chr15 53660557 53666674 -49828300 - L1Md_T LINE L1 0 6582 467 2 994 649 294 17 110 chr15 53667184 53667421 -49827553 + B3A SINE B2 2 216 0 2 994 24 0 0 0 chr15 53667450 53667474 -49827500 + AT_rich Low_complexity Low_complexity 1 24 0 2 994 399 241 0 12 chr15 53667497 53667581 -49827393 + Lx8 LINE L1 6354 6436 -1037 2 994 1665 295 108 60 chr15 53667581 53668366 -49826608 + Lx8 LINE L1 6398 7220 -253 2 994 617 146 36 6 chr15 53669375 53669541 -49825433 + (CA)n Simple_repeat Simple_repeat 2 172 0 2 994 337 365 129 34 chr15 53670080 53670497 -49824477 + L2 LINE L2 2355 2811 -608 2 994 692 186 66 112 chr15 53670535 53670783 -49824191 + Lx4B LINE L1 6742 7053 -5 2 994 300 362 70 38 chr15 53670798 53670930 -49824044 + RSINE1 SINE B4 3 143 -22 2 994 1007 94 0 43 chr15 53670930 53671118 -49823856 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 994 300 362 70 38 chr15 53671118 53671143 -49823831 + RSINE1 SINE B4 144 165 0 2 994 590 129 23 6 chr15 53671145 53671326 -49823648 + (CA)n Simple_repeat Simple_repeat 1 184 0 2 994 7227 81 28 7 chr15 53671524 53671568 -49823406 - L1Md_F2 LINE L1 0 6582 6543 2 994 3672 25 2 0 chr15 53671568 53671963 -49823011 + MTA_Mm LTR MaLR 1 396 0 2 994 7227 79 20 9 chr15 53671963 53673535 -49821439 - L1Md_F2 LINE L1 -40 6542 4942 2 994 278 359 63 59 chr15 53673740 53673962 -49821012 - MER102b DNA MER1_type 0 341 119 2 994 246 290 97 22 chr15 53674217 53674351 -49820623 - MIR SINE MIR -87 175 32 2 994 187 295 12 49 chr15 53675074 53675156 -49819818 - L2a LINE L2 -109 3317 3239 2 994 422 280 137 26 chr15 53675846 53676191 -49818783 + MLT1B LTR MaLR 1 390 0 2 994 373 310 16 34 chr15 53677378 53677558 -49817416 - MTE2a LTR MaLR 0 379 201 2 994 2126 71 49 11 chr15 53677871 53678155 -49816819 - L1_Mus3 LINE L1 -1 6637 6343 2 994 826 65 9 0 chr15 53678155 53678262 -49816712 + L1_Mus3 LINE L1 6231 6338 -300 2 994 1154 79 0 0 chr15 53678282 53678421 -49816553 + B1_Mus1 SINE Alu 1 139 -9 2 994 6851 153 55 24 chr15 53680895 53683105 -49811869 + L1Md_F LINE L1 98 2253 -3630 2 994 425 321 35 20 chr15 53683192 53683392 -49811582 + MER3 DNA MER1_type 1 203 -6 2 994 701 168 0 0 chr15 53684366 53684479 -49810495 + L1_Mur2 LINE L1 5045 5157 -720 2 994 3069 38 0 88 chr15 53684479 53684879 -49810095 + RLTR10B2 LTR ERVK 1 365 0 2 994 1350 43 0 0 chr15 53684889 53685050 -49809924 + RLTR10-int LTR ERVK 41 201 -1786 2 994 233 278 0 0 chr15 53685050 53685104 -49809870 + RLTR27 LTR ERVK 222 275 -34 2 994 366 47 0 0 chr15 53685104 53685147 -49809827 + RLTR10-int LTR ERVK 225 267 -7314 2 994 866 65 38 19 chr15 53685254 53685411 -49809563 + (GGAAA)n Simple_repeat Simple_repeat 4 163 0 2 994 324 95 0 0 chr15 53685411 53685453 -49809521 + RLTR10-int LTR ERVK 96 137 -6405 2 994 2871 53 0 3 chr15 53685456 53685798 -49809176 + RLTR10-int LTR ERVK 652 992 -995 2 994 453 326 38 38 chr15 53685823 53686218 -49808756 + RLTR10-int LTR ERVK 1172 1566 -6015 2 994 1511 125 99 0 chr15 53686218 53686450 -49808524 + IAP-d-int LTR ERVK 5001 5255 -1287 2 994 4257 145 13 12 chr15 53686454 53687139 -49807835 + IAPEY3-int LTR ERVK 6995 7680 0 2 994 526 56 0 0 chr15 53687139 53687210 -49807764 + RLTR10B2 LTR ERVK 1 71 -294 2 994 805 188 7 7 chr15 53687210 53687360 -49807614 - Lx6 LINE L1 -374 7086 6937 2 994 617 297 58 6 chr15 53687471 53687627 -49807347 + B3A SINE B2 2 165 -33 2 994 213 39 0 0 chr15 53687631 53687657 -49807317 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 994 401 276 83 30 chr15 53688288 53688456 -49806518 - L1M5 LINE L1 -322 5802 5626 2 994 805 169 7 0 chr15 53689812 53689954 -49805020 - Lx6 LINE L1 -5 7455 7313 2 994 1535 39 0 0 chr15 53689954 53690134 -49804840 - L1_Mus1 LINE L1 -138 6429 6250 2 994 793 85 0 41 chr15 53690135 53690258 -49804716 + L1_Mus1 LINE L1 6450 6567 0 2 994 1541 253 82 42 chr15 53690264 53690689 -49804285 - Lx6 LINE L1 -136 7324 6883 2 994 911 165 6 0 chr15 53691199 53691375 -49803599 + GA-rich Low_complexity Low_complexity 2 178 0 2 994 209 276 35 0 chr15 53692254 53692312 -49802662 - L2b LINE L2 -3 3372 3313 2 994 3280 71 5 2 chr15 53692489 53692884 -49802090 + MTA_Mm LTR MaLR 1 396 0 2 994 184 293 67 60 chr15 53693591 53693740 -49801234 + L2 LINE L2 2548 2697 -722 2 994 263 267 61 3 chr15 53694371 53694475 -49800499 - MIRc SINE MIR -70 198 85 2 994 189 147 0 0 chr15 53696235 53696269 -49798705 + (T)n Simple_repeat Simple_repeat 1 34 0 2 994 3772 74 4 25 chr15 53696309 53696795 -49798179 - L1_Mus2 LINE L1 0 6566 6091 2 994 6778 74 1 0 chr15 53696795 53697683 -49797291 + L1_Mm LINE L1 3861 4749 -1134 2 994 5942 28 0 1 chr15 53697866 53698565 -49796409 - L1Md_T LINE L1 0 6582 5937 2 994 344 293 5 0 chr15 53698792 53698921 -49796053 + L1MB3 LINE L1 5772 5903 -286 2 994 499 295 108 0 chr15 53698931 53699060 -49795914 + B1F SINE Alu 7 149 0 2 994 373 303 30 74 chr15 53699087 53699290 -49795684 + L1MB3 LINE L1 5897 6090 -93 2 994 375 187 18 9 chr15 53699487 53699600 -49795374 + (TG)n Simple_repeat Simple_repeat 2 115 0 2 994 528 16 0 0 chr15 53699600 53699661 -49795313 + (GA)n Simple_repeat Simple_repeat 1 61 0 2 994 213 268 0 35 chr15 53701762 53701820 -49793154 + L2c LINE L2 3285 3340 -47 2 994 2952 91 15 2 chr15 53701845 53702253 -49792721 - Lx LINE L1 -6 6648 6236 2 994 8947 18 0 0 chr15 53702253 53703259 -49791715 + L1Md_T LINE L1 4581 5586 -297 2 994 9011 33 0 0 chr15 53703259 53704254 -49790720 + L1Md_T LINE L1 5587 6581 -1 2 994 1624 209 72 34 chr15 53704287 53704694 -49790280 + MTC LTR MaLR 8 503 -2 2 994 38 61 0 0 chr15 53704756 53704822 -49790152 + AT_rich Low_complexity Low_complexity 1 66 0 2 994 627 0 36 0 chr15 53705043 53705126 -49789848 + (TAGA)n Simple_repeat Simple_repeat 1 86 0 2 994 1094 308 78 19 chr15 53705170 53705735 -49789239 + L1MDa LINE L1 730 1404 -5229 2 994 288 0 0 0 chr15 53706329 53706361 -49788613 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 994 1056 93 0 0 chr15 53706629 53706769 -49788205 + L1_Mus1 LINE L1 6428 6567 0 2 994 243 0 0 0 chr15 53706774 53706801 -49788173 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 994 238 200 11 53 chr15 53707909 53708004 -49786970 + (CAAA)n Simple_repeat Simple_repeat 1 91 0 2 994 387 345 41 21 chr15 53708131 53708169 -49786805 + B4 SINE B4 51 91 -201 3 994 709 203 24 0 chr15 53708169 53708292 -49786682 + B1_Mur3 SINE Alu 3 128 -21 3 994 1592 224 79 10 chr15 53708384 53708776 -49786198 - MTD LTR MaLR 0 419 1 3 994 225 94 0 0 chr15 53709888 53709920 -49785054 + (CTG)n Simple_repeat Simple_repeat 2 33 0 3 994 243 0 0 0 chr15 53709923 53709950 -49785024 + (A)n Simple_repeat Simple_repeat 1 27 0 3 994 4146 67 41 37 chr15 53709979 53710520 -49784454 - L1_Mus2 LINE L1 0 6566 6024 3 994 227 337 55 66 chr15 53711137 53711318 -49783656 + RMER15 LTR ERVL 291 469 -106 3 994 312 195 126 0 chr15 53711503 53711590 -49783384 - MIR SINE MIR -89 173 76 3 994 8894 120 58 2 chr15 53712934 53714326 -49780648 + Lx2B LINE L1 5526 7000 0 3 994 477 110 0 0 chr15 53714618 53714691 -49780283 + (TGGA)n Simple_repeat Simple_repeat 1 73 0 3 994 364 308 87 20 chr15 53715643 53715792 -49779182 - MER58B DNA MER1_type -2 339 181 3 994 709 202 0 0 chr15 53718224 53718343 -49776631 - Lx5 LINE L1 -125 6925 6807 3 994 385 310 101 50 chr15 53718409 53718667 -49776307 + Helitron1Na_Mam RC Helitron 792 1062 0 3 994 234 196 88 18 chr15 53719373 53719430 -49775544 + MIR SINE MIR 37 97 -111 3 994 860 247 10 26 chr15 53720138 53720333 -49774641 + B3 SINE B2 25 216 0 3 994 497 142 9 26 chr15 53720400 53720516 -49774458 + (TCTG)n Simple_repeat Simple_repeat 3 116 0 3 994 234 0 0 0 chr15 53720516 53720542 -49774432 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 3 994 771 239 79 5 chr15 53720543 53720583 -49774391 - B3 SINE B2 -13 203 162 3 994 378 0 0 0 chr15 53720583 53720625 -49774349 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 3 994 859 166 10 1 chr15 53720625 53720773 -49774201 - B2_Mm2 SINE B2 -55 161 1 3 994 366 146 0 0 chr15 53721084 53721166 -49773808 + (TC)n Simple_repeat Simple_repeat 1 82 0 3 994 821 309 37 40 chr15 53721421 53721694 -49773280 + B4 SINE B4 17 288 -4 3 994 974 231 68 18 chr15 53722392 53722612 -49772362 - ORR1D2 LTR MaLR -9 361 131 3 994 749 161 8 0 chr15 53723064 53723188 -49771786 - ORR1D2 LTR MaLR -245 125 1 3 994 207 0 0 0 chr15 53723355 53723378 -49771596 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 3 994 887 163 7 0 chr15 53723378 53723513 -49771461 - B1_Mur2 SINE Alu -13 136 1 3 994 1391 196 4 4 chr15 53724090 53724352 -49770622 + MTC-int LTR MaLR 681 934 -324 3 994 599 206 30 0 chr15 53724351 53724482 -49770492 + MTC-int LTR MaLR 1124 1258 0 3 994 1756 188 108 5 chr15 53724482 53724862 -49770112 + MTC LTR MaLR 1 419 -2 3 994 324 0 0 0 chr15 53725239 53725275 -49769699 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 994 665 268 22 0 chr15 53725322 53725460 -49769514 - B3A SINE B2 -57 141 1 3 994 964 297 3 7 chr15 53725981 53726266 -49768708 - B4A SINE B4 -8 284 1 3 994 372 258 145 0 chr15 53726494 53726653 -49768321 + L1ME1 LINE L1 5921 6102 -77 3 994 565 286 78 6 chr15 53727658 53727837 -49767137 + RMER15 LTR ERVL 371 562 -13 3 994 237 65 0 0 chr15 53729856 53729887 -49765087 + (GGA)n Simple_repeat Simple_repeat 1 31 0 3 994 649 120 41 49 chr15 53729915 53730038 -49764936 - RLTR13D6 LTR ERVK 0 902 781 3 994 288 0 0 0 chr15 53731423 53731455 -49763519 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 3 994 201 74 0 0 chr15 53731610 53731637 -49763337 + (TATG)n Simple_repeat Simple_repeat 2 28 0 3 994 242 125 21 0 chr15 53734880 53734928 -49760046 + (CATA)n Simple_repeat Simple_repeat 2 50 0 3 994 1606 178 82 20 chr15 53734956 53735347 -49759627 - Lx4A LINE L1 -734 6324 5910 3 994 3637 157 14 20 chr15 53735343 53736006 -49758968 - Lx2B LINE L1 -2 6998 6340 3 994 22846 120 35 89 chr15 53736014 53739507 -49755467 - Lx4A LINE L1 -1137 5921 2696 3 124 1346 241 53 63 chr15 53739507 53740017 -49754957 + RLTR16 LTR ERVK 1 505 0 3 995 22846 147 41 78 chr15 53740017 53742203 -49752771 - Lx4A LINE L1 -3182 2695 481 3 995 1000 122 0 13 chr15 53742511 53742660 -49752314 + B1_Mus1 SINE Alu 2 148 0 3 995 189 94 0 0 chr15 53742695 53742727 -49752247 + (CAAA)n Simple_repeat Simple_repeat 3 34 0 3 995 492 198 20 40 chr15 53742927 53743027 -49751947 - B3A SINE B2 -96 102 5 3 995 468 51 0 0 chr15 53743341 53743400 -49751574 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 995 333 145 40 0 chr15 53743400 53743476 -49751498 + (TA)n Simple_repeat Simple_repeat 2 80 0 3 995 267 234 108 15 chr15 53743505 53743570 -49751404 - MIRc SINE MIR -106 162 92 3 995 581 276 165 20 chr15 53743713 53743968 -49751006 - B4A SINE B4 0 292 1 3 995 23 86 0 0 chr15 53744069 53744127 -49750847 + AT_rich Low_complexity Low_complexity 1 58 0 3 995 365 250 51 35 chr15 53745293 53745404 -49749570 - MLT1C LTR MaLR -393 112 3 3 995 851 154 6 0 chr15 53745712 53745881 -49749093 + (TG)n Simple_repeat Simple_repeat 2 171 0 3 995 390 57 0 0 chr15 53746880 53746933 -49748041 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 3 995 844 303 81 37 chr15 53747947 53748218 -49746756 + B4A SINE B4 2 284 -8 3 995 429 54 0 0 chr15 53748235 53748291 -49746683 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 995 753 351 49 14 chr15 53748291 53748577 -49746397 - MLT1F LTR MaLR -97 451 156 3 995 3118 166 12 15 chr15 53748660 53749511 -49745463 - Lx5 LINE L1 -832 6218 5361 3 995 1020 148 6 0 chr15 53749510 53749672 -49745302 + Lx5 LINE L1 6217 6379 -671 3 995 471 17 0 0 chr15 53749668 53749727 -49745247 - L1Md_A LINE L1 -5638 1086 1028 3 995 9344 22 0 0 chr15 53749725 53750862 -49744112 + L1Md_T LINE L1 4450 5586 -297 3 995 8445 32 1 0 chr15 53750864 53751857 -49743117 + L1Md_T LINE L1 5589 6582 0 3 995 456 100 50 0 chr15 53751857 53751937 -49743037 + Lx5 LINE L1 6364 6447 -603 3 995 1597 244 54 44 chr15 53751942 53752471 -49742503 + RLTR20C LTR ERVK 5 534 0 3 995 2603 217 28 23 chr15 53752471 53753075 -49741899 + Lx5 LINE L1 6443 7049 -1 3 995 459 63 0 0 chr15 53754739 53754802 -49740172 + (TG)n Simple_repeat Simple_repeat 1 63 0 3 995 256 278 45 53 chr15 53755174 53755307 -49739667 - Charlie26a DNA MER1_type -116 209 78 3 995 206 32 0 31 chr15 53755823 53755855 -49739119 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 3 995 890 267 26 10 chr15 53756102 53756408 -49738566 + L1M4 LINE L1 4223 4533 -1613 3 995 4106 111 63 45 chr15 53756434 53757229 -49737745 - RMER17D2 LTR ERVK 0 809 1 3 995 536 265 132 4 chr15 53757608 53757946 -49737028 + L1M4 LINE L1 5260 5637 -542 3 995 229 318 78 82 chr15 53758068 53758274 -49736700 - MLT1A1 LTR MaLR -203 205 1 3 995 307 331 63 11 chr15 53758456 53758645 -49736329 + L1MB8 LINE L1 5863 6061 -117 3 995 12670 70 8 2 chr15 53758657 53761074 -49733900 - L1Md_F2 LINE L1 -1 6581 4146 3 995 11559 100 6 8 chr15 53761072 53763669 -49731305 - L1Md_F2 LINE L1 -2963 2920 331 3 995 268 291 35 35 chr15 53764572 53764686 -49730288 - L2a LINE L2 -9 3417 3304 3 995 234 0 0 0 chr15 53765212 53765238 -49729736 + (T)n Simple_repeat Simple_repeat 1 26 0 3 995 201 283 57 0 chr15 53767898 53767951 -49727023 - L2a LINE L2 -227 3148 3093 3 995 358 64 0 0 chr15 53767957 53768004 -49726970 - Lx3B LINE L1 -427 6546 6500 3 995 399 300 30 0 chr15 53768092 53768192 -49726782 + MTD LTR MaLR 3 105 -314 3 995 6196 231 18 20 chr15 53768207 53769732 -49725242 - Lx7 LINE L1 0 7696 6175 3 995 323 275 22 7 chr15 53769733 53769872 -49725102 + (TA)n Simple_repeat Simple_repeat 2 142 0 3 995 8072 257 45 99 chr15 53769929 53771768 -49723206 - Lx7 LINE L1 -1532 6164 4288 3 995 315 0 0 0 chr15 53771768 53771803 -49723171 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3 995 9387 219 43 105 chr15 53771803 53773003 -49721971 - Lx7 LINE L1 -1582 4298 3477 3 995 903 36 0 0 chr15 53773003 53773114 -49721860 + (TTC)n Simple_repeat Simple_repeat 1 111 0 3 995 9387 199 47 89 chr15 53773114 53773263 -49721711 - Lx7 LINE L1 -2403 3477 3423 3 995 2678 117 20 10 chr15 53773263 53773669 -49721305 + Lx2 LINE L1 6588 6997 0 3 995 9387 199 47 89 chr15 53773669 53775750 -49719224 - Lx7 LINE L1 -2458 3422 1403 3 995 2446 51 33 70 chr15 53775750 53776109 -49718865 - ORR1A1 LTR MaLR 0 346 1 3 995 9387 218 67 25 chr15 53776109 53776920 -49718054 - Lx7 LINE L1 -4478 1402 35 3 995 424 184 243 21 chr15 53777092 53777331 -49717643 + Lx9 LINE L1 7352 7643 -1 3 995 778 328 24 20 chr15 53777988 53778234 -49716740 + MLT1E LTR MaLR 365 611 -42 3 995 3305 76 0 0 chr15 53778701 53779137 -49715837 + L1Md_T LINE L1 6146 6581 -1 3 995 22 0 0 0 chr15 53779137 53779159 -49715815 + AT_rich Low_complexity Low_complexity 1 22 0 3 995 207 0 0 0 chr15 53779178 53779201 -49715773 + (A)n Simple_repeat Simple_repeat 1 23 0 3 995 231 320 82 10 chr15 53779543 53779641 -49715333 - MIR3 SINE MIR -34 174 70 3 995 315 0 0 0 chr15 53780241 53780276 -49714698 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 995 1022 245 129 29 chr15 53780509 53780849 -49714125 - ORR1D1 LTR MaLR 0 374 1 3 995 369 298 74 99 chr15 53780991 53781233 -49713741 + MER68 LTR ERVL 10 245 -318 3 995 648 273 90 5 chr15 53781239 53781427 -49713547 - MTEb LTR MaLR 0 379 176 3 995 321 225 26 35 chr15 53781427 53781542 -49713432 - Lx9 LINE L1 -11 7633 7520 3 995 408 40 0 0 chr15 53781546 53781596 -49713378 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 995 266 239 0 0 chr15 53781599 53781670 -49713304 - Lx9 LINE L1 -170 7474 7404 3 995 245 172 16 0 chr15 53781926 53781990 -49712984 + (TATATG)n Simple_repeat Simple_repeat 3 67 0 3 995 274 286 0 39 chr15 53782198 53782300 -49712674 + (CATG)n Simple_repeat Simple_repeat 2 99 0 3 995 610 157 0 0 chr15 53783638 53783740 -49711234 + L1Md_F2 LINE L1 236 337 -6282 3 995 33569 67 2 1 chr15 53783733 53788657 -49706317 + L1Md_F2 LINE L1 563 5589 -297 3 995 7868 55 4 2 chr15 53788657 53789644 -49705330 + L1Md_F2 LINE L1 5591 6579 -6 3 995 208 322 200 0 chr15 53790405 53790520 -49704454 - MIR SINE MIR -114 148 11 3 995 11161 116 47 20 chr15 53790539 53792901 -49702073 - L1_Mur1 LINE L1 -3069 2817 7 3 995 201 289 75 32 chr15 53793397 53793490 -49701484 + MIRm SINE MIR 180 276 0 3 995 183 319 96 0 chr15 53793542 53793636 -49701338 - MIRb SINE MIR -50 218 116 3 995 21 0 0 0 chr15 53794699 53794720 -49700254 + AT_rich Low_complexity Low_complexity 1 21 0 3 995 5102 238 36 7 chr15 53795212 53795736 -49699238 + Lx7 LINE L1 55 595 -7133 3 995 384 22 0 0 chr15 53795736 53795781 -49699193 + (TCC)n Simple_repeat Simple_repeat 3 47 0 3 995 5102 219 58 24 chr15 53795781 53797300 -49697674 + Lx7 LINE L1 596 2168 -3712 3 995 886 169 32 8 chr15 53797528 53797745 -49697229 + Lx7 LINE L1 2194 2420 -3460 3 995 354 98 0 0 chr15 53797760 53797811 -49697163 + (TTCA)n Simple_repeat Simple_repeat 3 53 0 3 995 5512 130 39 11 chr15 53797811 53798742 -49696232 - Lx3_Mus LINE L1 -20 6989 6033 3 995 8972 174 191 36 chr15 53798751 53800791 -49694183 + Lx7 LINE L1 2402 4828 -1052 3 995 522 0 0 0 chr15 53800791 53800849 -49694125 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 995 8972 174 191 36 chr15 53800849 53801271 -49693703 + Lx7 LINE L1 4829 5244 -636 3 995 1604 199 39 39 chr15 53801267 53801371 -49693603 + Lx7 LINE L1 5488 5586 -294 3 995 637 130 129 8 chr15 53801371 53801495 -49693479 + B1_Mur4 SINE Alu 1 139 -11 4 995 348 24 0 0 chr15 53801495 53801536 -49693438 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 4 995 1604 199 39 39 chr15 53801536 53801785 -49693189 + Lx7 LINE L1 5587 5841 -39 3 995 5515 244 42 70 chr15 53801787 53803182 -49691792 + Lx7 LINE L1 6065 7415 -281 3 995 903 67 0 0 chr15 53803182 53803301 -49691673 + (TCTA)n Simple_repeat Simple_repeat 3 121 0 4 995 5515 244 42 70 chr15 53803301 53803583 -49691391 + Lx7 LINE L1 7416 7696 0 3 995 528 16 0 0 chr15 53803854 53803915 -49691059 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 995 455 331 22 30 chr15 53805302 53805436 -49689538 + ID_B1 SINE B4 87 219 -5 4 995 321 401 97 36 chr15 53805743 53806103 -49688871 - LTR33 LTR ERVL -131 384 3 4 995 294 309 67 56 chr15 53806123 53806301 -49688673 - MamRep4096 DNA hAT? -114 312 133 4 995 4663 216 65 32 chr15 53806366 53807478 -49687496 + Lx9 LINE L1 6313 7460 -184 4 995 343 112 33 22 chr15 53807522 53807613 -49687361 + (TG)n Simple_repeat Simple_repeat 2 93 0 4 995 3251 39 15 0 chr15 53808284 53808674 -49686300 - MTA_Mm LTR MaLR 0 396 1 4 995 9183 33 5 0 chr15 53808674 53809767 -49685207 - MTA_Mm-int LTR MaLR 0 1098 1 4 995 3324 38 5 0 chr15 53809767 53810161 -49684813 - MTA_Mm LTR MaLR 0 396 1 4 995 33478 54 32 1 chr15 53810181 53815274 -49679700 - L1Md_F2 LINE L1 -12 6570 1310 4 995 622 233 30 86 chr15 53815296 53815617 -49679357 - L1Md_F LINE L1 -5987 532 209 4 995 1109 224 13 23 chr15 53815608 53815910 -49679064 - L1VL1 LINE L1 -6123 299 1 4 995 22 0 0 0 chr15 53817889 53817911 -49677063 + AT_rich Low_complexity Low_complexity 1 22 0 4 995 445 304 67 18 chr15 53818266 53818430 -49676544 - MER5B DNA MER1_type 0 178 7 4 995 451 230 30 10 chr15 53819828 53819929 -49675045 - B1_Mus1 SINE Alu -6 142 40 4 995 785 319 53 19 chr15 53819929 53820191 -49674783 + B4A SINE B4 22 292 0 4 995 450 36 0 0 chr15 53820344 53820400 -49674574 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 995 249 83 0 0 chr15 53820634 53820670 -49674304 - MT2A LTR ERVL 0 533 498 4 995 507 17 0 0 chr15 53820704 53820764 -49674210 + (TC)n Simple_repeat Simple_repeat 1 60 0 4 995 554 85 11 0 chr15 53820766 53820860 -49674114 + (CA)n Simple_repeat Simple_repeat 2 96 0 4 995 304 221 161 11 chr15 53820860 53820947 -49674027 + B1_Mm SINE Alu 48 147 0 4 995 248 299 189 60 chr15 53822001 53822218 -49672756 - MLT2B2 LTR ERVL -2 560 316 4 995 410 315 68 7 chr15 53822303 53822450 -49672524 - MTEa LTR MaLR -219 160 5 4 995 1426 61 0 11 chr15 53822729 53822911 -49672063 + B2_Mm2 SINE B2 2 181 -14 4 995 24 0 0 0 chr15 53824656 53824680 -49670294 + AT_rich Low_complexity Low_complexity 1 24 0 4 995 323 147 0 38 chr15 53825139 53825245 -49669729 + (TA)n Simple_repeat Simple_repeat 1 102 0 4 995 349 322 0 25 chr15 53825479 53825597 -49669377 - PB1D10 SINE Alu -2 115 1 4 995 294 328 111 115 chr15 53825831 53826110 -49668864 + MTEa LTR MaLR 1 278 -101 4 995 414 100 0 0 chr15 53826508 53826568 -49668406 + (GGGA)n Simple_repeat Simple_repeat 3 62 0 4 995 228 250 18 0 chr15 53826596 53826652 -49668322 + CT-rich Low_complexity Low_complexity 2 58 0 4 995 24 0 0 0 chr15 53827085 53827109 -49667865 + AT_rich Low_complexity Low_complexity 1 24 0 4 995 22 0 0 0 chr15 53827502 53827524 -49667450 + AT_rich Low_complexity Low_complexity 1 22 0 4 995 289 0 49 0 chr15 53828445 53828486 -49666488 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 995 1940 41 4 4 chr15 53828567 53828814 -49666160 - L1Md_F3 LINE L1 -14 6570 6324 4 995 666 244 134 17 chr15 53829076 53829255 -49665719 + B3 SINE B2 9 208 -8 4 995 285 300 0 36 chr15 53829300 53829383 -49665591 + RMER1B Other Other 639 718 -348 4 995 298 317 0 54 chr15 53829825 53829955 -49665019 + RMER1C Other Other 9 131 -1211 4 995 553 139 19 0 chr15 53830006 53830114 -49664860 + (TG)n Simple_repeat Simple_repeat 2 111 0 4 995 1152 327 56 8 chr15 53830472 53830863 -49664111 + RMER1C Other Other 420 829 -513 4 995 1016 255 39 19 chr15 53831009 53831383 -49663591 + L1MA7 LINE L1 5471 5854 -437 4 995 423 296 122 0 chr15 53831446 53831561 -49663413 + B3A SINE B2 24 152 -46 4 995 423 0 0 0 chr15 53831565 53831612 -49663362 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 995 591 250 22 15 chr15 53831618 53831752 -49663222 + B1F SINE Alu 10 144 -5 4 995 336 326 43 40 chr15 53832199 53832522 -49662452 - L1MD LINE L1 -1677 4469 4146 4 995 2276 248 147 28 chr15 53832626 53833347 -49661627 + RMER13A LTR ERVK 14 820 -40 4 995 251 292 14 0 chr15 53833376 53833448 -49661526 - Lx9 LINE L1 -317 7327 7255 4 995 1815 330 25 22 chr15 53833448 53834249 -49660725 + Lx9 LINE L1 6411 7213 -431 4 995 932 283 56 38 chr15 53834255 53834831 -49660143 - L1MC LINE L1 -2701 3445 2860 4 995 1414 209 54 22 chr15 53835095 53835307 -49659667 - ORR1C2 LTR MaLR 0 384 177 4 995 337 91 15 29 chr15 53835307 53835375 -49659599 + (CAGA)n Simple_repeat Simple_repeat 2 68 0 4 995 1414 209 54 22 chr15 53835375 53835533 -49659441 - ORR1C2 LTR MaLR -208 176 3 4 995 387 266 178 49 chr15 53835641 53835710 -49659264 - L1MD2 LINE L1 -189 6170 6100 4 995 2010 166 97 8 chr15 53835710 53836093 -49658881 + MTC LTR MaLR 1 417 -4 4 995 387 266 178 49 chr15 53836093 53836248 -49658726 - L1MD2 LINE L1 -260 6099 5917 4 995 399 356 30 30 chr15 53836282 53836447 -49658527 + B4A SINE B4 109 273 -19 4 995 387 41 0 0 chr15 53836482 53836531 -49658443 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 995 414 295 53 11 chr15 53836758 53837031 -49657943 - L1MD2 LINE L1 -1558 4588 4308 4 995 2883 175 4 0 chr15 53837092 53837634 -49657340 + L1_Mus1 LINE L1 5060 5603 -280 4 995 4264 102 3 9 chr15 53837619 53837855 -49657119 + L1_Mus1 LINE L1 5227 5463 -420 4 995 3252 51 121 2 chr15 53837855 53838286 -49656688 - LTRIS_Mm LTR ERV1 0 482 1 4 995 7343 70 0 9 chr15 53838286 53839403 -49655571 + L1_Mus1 LINE L1 5464 6567 0 4 995 213 121 0 0 chr15 53839410 53839443 -49655531 + (A)n Simple_repeat Simple_repeat 1 33 0 4 995 8725 113 22 5 chr15 53839460 53840836 -49654138 + Lx2 LINE L1 5587 6986 -11 4 995 246 267 48 0 chr15 53840843 53840948 -49654026 - L1M4 LINE L1 -1897 4249 4140 4 995 3081 56 10 0 chr15 53840948 53841340 -49653634 + MTA_Mm LTR MaLR 1 396 0 4 995 447 19 0 0 chr15 53842234 53842286 -49652688 + (TTG)n Simple_repeat Simple_repeat 3 54 0 4 995 694 241 0 7 chr15 53842287 53842425 -49652549 - B1_Mus2 SINE Alu -10 137 1 4 995 342 0 0 0 chr15 53842437 53842475 -49652499 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 4 995 554 275 7 7 chr15 53842494 53842637 -49652337 + B1_Mur2 SINE Alu 5 147 -2 4 995 2054 53 61 0 chr15 53842851 53843115 -49651859 + L1Md_F2 LINE L1 6301 6580 -2 4 995 650 333 144 28 chr15 53843518 53843975 -49650999 - LTR40a LTR ERVL 0 519 10 4 995 243 0 0 0 chr15 53844318 53844345 -49650629 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 4 995 442 248 19 38 chr15 53844589 53844694 -49650280 - PB1D10 SINE Alu 0 117 15 4 995 194 0 39 0 chr15 53847188 53847214 -49647760 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 4 995 562 365 120 20 chr15 53847467 53847766 -49647208 - LTR16A LTR ERVL -70 381 53 4 995 342 91 0 0 chr15 53847844 53847899 -49647075 + (T)n Simple_repeat Simple_repeat 1 55 0 4 995 208 111 0 53 chr15 53848105 53848143 -49646831 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 4 995 270 364 67 17 chr15 53848143 53848263 -49646711 + LTR33 LTR ERVL 86 211 -304 4 995 418 333 34 14 chr15 53849464 53849610 -49645364 + RSINE1 SINE B4 16 164 -1 4 995 548 257 27 14 chr15 53850388 53850534 -49644440 + B1_Mur1 SINE Alu 2 149 0 4 995 2179 157 63 0 chr15 53851020 53851383 -49643591 - ORR1B1 LTR MaLR -8 386 1 4 995 573 72 0 0 chr15 53851546 53851629 -49643345 + (TC)n Simple_repeat Simple_repeat 1 83 0 4 995 508 241 0 18 chr15 53851868 53851982 -49642992 - B1_Mus1 SINE Alu -12 136 25 4 995 195 42 0 0 chr15 53852889 53852913 -49642061 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 4 995 2115 110 37 51 chr15 53852913 53853268 -49641706 - Lx LINE L1 -13 6641 6292 4 995 332 350 34 64 chr15 53854691 53854926 -49640048 + MER102b DNA MER1_type 88 315 -26 4 995 342 0 0 0 chr15 53855209 53855247 -49639727 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 995 283 54 0 82 chr15 53856024 53856085 -49638889 + L1Md_F2 LINE L1 6527 6582 0 4 995 294 325 0 94 chr15 53856106 53856191 -49638783 - B3A SINE B2 -38 178 102 4 995 239 269 96 0 chr15 53856242 53856346 -49638628 + L1VL1 LINE L1 279 392 -6030 4 995 353 218 36 120 chr15 53856428 53856595 -49638379 + MT2B2 LTR ERVL 112 264 -320 4 995 1028 66 7 0 chr15 53856494 53856630 -49638344 + B1_Mm SINE Alu 11 147 0 4 995 271 233 0 0 chr15 53856642 53856715 -49638259 + L1VL1 LINE L1 328 400 -6022 4 995 436 244 16 8 chr15 53856824 53856952 -49638022 + L1_Mus1 LINE L1 675 803 -5813 4 995 25029 105 89 5 chr15 53856960 53862279 -49632695 + L1_Mus1 LINE L1 752 6567 0 4 995 439 233 0 0 chr15 53862281 53862371 -49632603 - B3A SINE B2 -107 91 2 4 995 962 167 78 0 chr15 53862383 53862563 -49632411 - B2_Mm2 SINE B2 0 195 2 4 995 57 39 0 0 chr15 53863483 53863561 -49631413 + AT_rich Low_complexity Low_complexity 1 78 0 4 995 557 172 0 22 chr15 53863606 53863790 -49631184 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 995 956 275 63 37 chr15 53863843 53864221 -49630753 - Lx9 LINE L1 -312 7332 6945 4 995 281 293 142 13 chr15 53864219 53864451 -49630523 + Lx9 LINE L1 7345 7606 -38 4 995 903 273 0 0 chr15 53864747 53864956 -49630018 - B3 SINE B2 -7 209 1 4 995 28 61 0 0 chr15 53864977 53865026 -49629948 + AT_rich Low_complexity Low_complexity 1 49 0 4 995 417 304 22 45 chr15 53866235 53866504 -49628470 - L1MD3 LINE L1 0 7995 7733 4 995 1080 134 56 5 chr15 53866524 53866719 -49628255 - L1_Mus4 LINE L1 -5 6631 6427 4 995 1344 158 8 55 chr15 53867781 53868147 -49626827 - Lx LINE L1 -445 6552 5870 4 995 2691 129 28 28 chr15 53868147 53868609 -49626365 + Lx LINE L1 6187 6648 -6 4 995 584 295 0 47 chr15 53868841 53869033 -49625941 - B3A SINE B2 -15 183 1 4 124 36955 4 0 0 chr15 53869102 53874463 -49620511 + L1Md_A LINE L1 225 5586 -297 4 996 9078 2 0 0 chr15 53874463 53875459 -49619515 + L1Md_A LINE L1 5587 6582 0 4 996 234 81 0 0 chr15 53875491 53875528 -49619446 + (A)n Simple_repeat Simple_repeat 1 37 0 5 996 993 46 0 0 chr15 53876315 53876446 -49618528 + (TTTC)n Simple_repeat Simple_repeat 3 133 0 5 996 180 233 0 0 chr15 53877513 53877556 -49617418 - MIR SINE MIR -13 249 207 5 996 495 48 0 0 chr15 53877683 53877745 -49617229 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 996 2461 72 3 89 chr15 53877986 53878141 -49616833 - MTB LTR MaLR -53 347 197 5 996 1116 90 11 17 chr15 53878141 53878322 -49616652 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 996 2461 72 3 89 chr15 53878322 53878546 -49616428 - MTB LTR MaLR -204 196 1 5 996 274 328 36 66 chr15 53878850 53878987 -49615987 + MLT1A1 LTR MaLR 2 134 -274 5 996 276 322 102 92 chr15 53879015 53879299 -49615675 + ORR1E LTR MaLR 73 359 0 5 996 38 0 0 0 chr15 53881577 53881615 -49613359 + AT_rich Low_complexity Low_complexity 1 38 0 5 996 603 242 40 162 chr15 53881627 53882071 -49612903 - Lx9 LINE L1 -1 7643 7254 5 996 796 342 109 23 chr15 53882711 53883360 -49611614 + Charlie14a DNA MER1_type 70 774 -390 5 996 14929 93 7 1 chr15 53883416 53886393 -49608581 + L1_Mus1 LINE L1 3575 6565 -2 5 996 371 347 73 63 chr15 53886396 53886602 -49608372 - B3A SINE B2 0 216 9 5 996 4253 196 21 16 chr15 53886756 53887694 -49607280 + Lx4B LINE L1 6095 7037 -21 5 996 573 28 0 0 chr15 53887694 53887765 -49607209 + (CTTA)n Simple_repeat Simple_repeat 1 71 0 5 996 346 188 145 0 chr15 53887996 53888113 -49606861 + Lx9 LINE L1 7504 7637 -7 5 996 228 312 54 88 chr15 53888460 53888664 -49606310 + MER3 DNA MER1_type 8 204 -5 5 996 575 261 255 36 chr15 53888879 53889185 -49605789 + MTC-int LTR MaLR 876 1248 -10 5 996 1279 279 75 8 chr15 53889210 53889585 -49605389 + MTC LTR MaLR 22 421 0 5 996 276 356 78 10 chr15 53889622 53889724 -49605250 + ID_B1 SINE B4 85 193 -31 5 996 304 357 0 0 chr15 53889727 53889822 -49605152 + ID4_ SINE ID 1 95 -57 5 996 2010 162 99 13 chr15 53889972 53890261 -49604713 - MTB_Mm LTR MaLR 0 407 116 5 996 4795 84 5 14 chr15 53890261 53890928 -49604046 + L1_Mus4 LINE L1 5976 6636 0 5 996 2010 162 99 13 chr15 53890928 53891013 -49603961 - MTB_Mm LTR MaLR -292 115 2 5 996 264 59 0 0 chr15 53891031 53891065 -49603909 + (TAA)n Simple_repeat Simple_repeat 2 35 0 5 996 261 371 89 56 chr15 53891120 53891423 -49603551 + MLT1I LTR MaLR 30 342 -69 5 996 383 237 82 0 chr15 53891879 53891976 -49602998 - ID_B1 SINE B4 -12 212 108 5 996 193 333 80 40 chr15 53892328 53892453 -49602521 - MIR SINE MIR -115 147 18 5 996 25 31 0 0 chr15 53892539 53892571 -49602403 + AT_rich Low_complexity Low_complexity 1 32 0 5 996 552 345 110 62 chr15 53892950 53893575 -49601399 + MLT2F LTR ERVL 3 657 -6 5 996 2021 136 6 0 chr15 53894602 53894918 -49600056 - ORR1A3 LTR MaLR -8 318 1 5 996 2195 253 127 70 chr15 53895175 53895543 -49599431 - RCHARR1 DNA MER1_type -3 971 569 5 996 4096 160 141 42 chr15 53895543 53896438 -49598536 + RLTR13C1 LTR ERVK 1 983 0 5 996 2195 253 127 70 chr15 53896438 53896545 -49598429 - RCHARR1 DNA MER1_type -406 568 474 5 996 465 19 0 0 chr15 53896545 53896599 -49598375 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 996 2195 253 127 70 chr15 53896599 53897039 -49597935 - RCHARR1 DNA MER1_type -501 473 3 5 996 233 157 143 0 chr15 53897068 53897138 -49597836 + L1MB2 LINE L1 6027 6106 -65 5 996 450 0 0 0 chr15 53897165 53897215 -49597759 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 996 857 304 19 23 chr15 53897242 53897505 -49597469 + MLT2D LTR ERVL 99 360 -54 5 996 235 399 20 53 chr15 53897631 53897782 -49597192 + MIR SINE MIR 19 164 -98 5 996 1269 179 9 13 chr15 53898174 53898400 -49596574 + URR1B DNA MER1_type 1 225 0 5 996 208 223 50 25 chr15 53898833 53898986 -49595988 + (TA)n Simple_repeat Simple_repeat 1 158 0 5 996 237 33 0 0 chr15 53898986 53899016 -49595958 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 996 208 223 50 25 chr15 53899016 53899023 -49595951 + (TA)n Simple_repeat Simple_repeat 2 8 0 5 996 740 159 258 0 chr15 53899693 53899856 -49595118 - B3 SINE B2 -9 207 3 5 996 450 0 0 0 chr15 53900359 53900409 -49594565 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 5 996 198 0 0 0 chr15 53900953 53900975 -49593999 + (TGG)n Simple_repeat Simple_repeat 3 24 0 5 996 1142 184 58 5 chr15 53902453 53902661 -49592313 + URR1B DNA MER1_type 6 224 -1 5 996 240 35 0 0 chr15 53902720 53902749 -49592225 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 996 290 194 20 30 chr15 53903304 53903405 -49591569 + (CAAA)n Simple_repeat Simple_repeat 2 101 0 5 996 770 333 37 28 chr15 53903408 53903729 -49591245 + MER97c DNA MER1_type? 188 511 -579 5 996 419 344 38 42 chr15 53904660 53904948 -49590026 + B4A SINE B4 2 288 -4 5 996 342 0 0 0 chr15 53904956 53904994 -49589980 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 996 781 245 87 15 chr15 53905155 53905350 -49589624 + B3 SINE B2 3 211 -5 5 996 205 256 89 13 chr15 53906719 53906798 -49588176 + L2 LINE L2 2872 2956 -463 5 996 502 313 101 40 chr15 53907367 53907863 -49587111 - L1M5 LINE L1 -2427 3719 3194 5 996 26 30 0 0 chr15 53907984 53908017 -49586957 + AT_rich Low_complexity Low_complexity 1 33 0 5 996 224 238 95 48 chr15 53908142 53908226 -49586748 + RSINE1 SINE B4 76 163 -2 5 996 712 247 69 32 chr15 53908249 53908437 -49586537 + MLT1A0 LTR MaLR 140 334 -31 5 996 317 346 28 31 chr15 53908828 53909105 -49585869 + MTE2b LTR MaLR 1 342 -37 5 996 17582 159 15 4 chr15 53909603 53913790 -49581184 + L1VL4 LINE L1 549 4785 -1101 5 996 6327 106 56 10 chr15 53913784 53914951 -49580023 + L1_Mus4 LINE L1 5433 6636 0 5 996 2125 248 119 7 chr15 53915194 53915790 -49579184 + Lx6 LINE L1 6772 7434 -26 5 996 21 36 0 0 chr15 53917342 53917370 -49577604 + AT_rich Low_complexity Low_complexity 1 28 0 5 996 4997 81 6 1 chr15 53919066 53919737 -49575237 + L1_Mus2 LINE L1 5893 6566 0 5 996 351 0 0 0 chr15 53920968 53921007 -49573967 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 5 996 184 377 0 13 chr15 53922011 53922089 -49572885 - L2c LINE L2 -47 3340 3264 5 996 705 191 147 5 chr15 53922607 53922791 -49572183 - L1_Mus3 LINE L1 -275 6363 6154 5 996 1142 162 8 33 chr15 53922785 53923027 -49571947 + L1_Mur2 LINE L1 5148 5383 -494 5 996 531 0 0 0 chr15 53923239 53923298 -49571676 + (TC)n Simple_repeat Simple_repeat 2 60 0 5 996 1204 118 0 0 chr15 53923300 53923469 -49571505 - B2_Mm2 SINE B2 -26 169 1 5 996 1321 175 43 4 chr15 53924751 53925032 -49569942 - Lx2A1 LINE L1 -5 7003 6712 5 996 23 0 0 0 chr15 53925178 53925201 -49569773 + AT_rich Low_complexity Low_complexity 1 23 0 5 996 363 44 0 0 chr15 53925237 53925282 -49569692 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 996 1107 286 32 81 chr15 53925919 53926037 -49568937 - ORR1E LTR MaLR 0 359 242 5 996 1679 201 11 154 chr15 53926037 53926497 -49568477 - ORR1B1 LTR MaLR 0 394 1 5 996 1107 286 32 81 chr15 53926497 53926747 -49568227 - ORR1E LTR MaLR -118 241 9 5 996 285 309 16 39 chr15 53926804 53926932 -49568042 + MIR SINE MIR 125 249 -13 5 996 231 208 0 0 chr15 53927049 53927120 -49567854 + (TCTCTG)n Simple_repeat Simple_repeat 1 71 0 5 996 240 184 59 42 chr15 53927958 53928077 -49566897 + (ATATG)n Simple_repeat Simple_repeat 2 122 0 5 996 259 338 0 14 chr15 53929101 53929173 -49565801 + ID4_ SINE ID 3 73 -10 5 996 297 303 0 15 chr15 53929113 53929180 -49565794 + tRNA-Ala-GCY_ tRNA tRNA 9 74 -1 5 996 732 268 92 94 chr15 53929190 53929671 -49565303 - L1MC2 LINE L1 -465 5879 5400 5 996 288 0 0 0 chr15 53929831 53929863 -49565111 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 996 1115 76 0 0 chr15 53929872 53930016 -49564958 - B1_Mus2 SINE Alu -3 144 1 5 996 194 432 43 0 chr15 53930286 53930425 -49564549 + L4 LINE RTE 537 681 -1348 5 996 356 168 21 0 chr15 53930759 53930854 -49564120 + (TCTCTG)n Simple_repeat Simple_repeat 4 100 0 5 996 223 147 0 0 chr15 53931061 53931095 -49563879 + L4 LINE RTE 1781 1814 -215 5 996 207 0 0 0 chr15 53931225 53931248 -49563726 + (TTTAG)n Simple_repeat Simple_repeat 3 25 0 5 996 623 269 27 20 chr15 53931680 53931828 -49563146 + B1_Mur2 SINE Alu 1 149 0 5 996 212 77 0 25 chr15 53933380 53933420 -49561554 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 996 432 271 141 69 chr15 53933448 53933710 -49561264 - B4 SINE B4 -11 281 1 5 996 33 0 0 0 chr15 53933839 53933872 -49561102 + AT_rich Low_complexity Low_complexity 1 33 0 5 996 223 321 121 50 chr15 53934170 53934311 -49560663 - MIRb SINE MIR -108 160 10 5 996 623 254 0 0 chr15 53934501 53934627 -49560347 - ID_B1 SINE B4 0 224 99 5 996 341 278 102 0 chr15 53935922 53936030 -49558944 + PB1D9 SINE Alu 2 120 0 5 996 604 374 9 13 chr15 53936278 53936503 -49558471 - ID_B1 SINE B4 0 224 1 5 996 27 29 0 0 chr15 53936955 53936989 -49557985 + AT_rich Low_complexity Low_complexity 1 34 0 5 996 217 252 0 9 chr15 53937602 53937723 -49557251 + GA-rich Low_complexity Low_complexity 1 119 0 5 996 5833 235 55 34 chr15 53937947 53939519 -49555455 - Lx6 LINE L1 -4 7456 5852 5 996 4587 173 9 6 chr15 53939525 53940393 -49554581 - L1_Mur3 LINE L1 -129 5751 4881 5 996 1460 158 32 76 chr15 53940895 53941264 -49553710 + Lx3C LINE L1 6622 6974 -2 5 996 387 0 0 0 chr15 53941777 53941820 -49553154 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 5 996 1099 51 0 7 chr15 53941820 53941958 -49553016 - B1_Mus1 SINE Alu -10 138 2 5 996 2008 134 108 3 chr15 53942007 53942358 -49552616 + ORR1B1 LTR MaLR 3 390 -4 5 996 288 0 0 0 chr15 53942557 53942589 -49552385 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 996 311 331 76 89 chr15 53942610 53942825 -49552149 - B4A SINE B4 -20 272 50 6 996 185 224 80 20 chr15 53943049 53943099 -49551875 + MIRc SINE MIR 3 55 -213 6 996 434 266 43 0 chr15 53943587 53943726 -49551248 + B1_Mur1 SINE Alu 5 149 0 6 996 212 226 16 0 chr15 53944377 53944439 -49550535 + CT-rich Low_complexity Low_complexity 2 64 0 6 996 602 281 161 5 chr15 53945306 53945499 -49549475 + ID_B1 SINE B4 1 223 -1 6 996 189 0 0 0 chr15 53946475 53946496 -49548478 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 996 199 319 100 43 chr15 53947154 53947293 -49547681 - MIRb SINE MIR -84 184 38 6 996 216 0 0 0 chr15 53948718 53948742 -49546232 + (TATG)n Simple_repeat Simple_repeat 4 27 0 6 996 584 311 5 69 chr15 53949554 53949758 -49545216 + B3A SINE B2 5 195 -3 6 996 248 175 0 45 chr15 53950267 53950333 -49544641 + (TTTA)n Simple_repeat Simple_repeat 4 66 0 6 996 957 307 31 22 chr15 53950456 53950903 -49544071 + L1MB7 LINE L1 5676 6126 -58 6 996 451 254 27 40 chr15 53950912 53951060 -49543914 - B1_Mur1 SINE Alu -1 148 3 6 996 355 283 59 42 chr15 53954258 53954376 -49540598 - B2_Mm2 SINE B2 -72 123 4 6 996 980 183 10 34 chr15 53955159 53955368 -49539606 - RMER10B LTR ERVL 0 398 195 6 996 313 228 33 13 chr15 53955379 53955530 -49539444 + GA-rich Low_complexity Low_complexity 4 157 0 6 996 1097 36 2 1 chr15 53955539 53955694 -49539280 - L1Md_F3 LINE L1 -375 6207 6052 6 996 1753 156 70 28 chr15 53957505 53957677 -49537297 + RMER10B LTR ERVL 28 196 -202 6 996 414 57 0 0 chr15 53957677 53957730 -49537244 + (TCTG)n Simple_repeat Simple_repeat 2 54 0 6 996 1753 156 70 28 chr15 53957730 53957913 -49537061 + RMER10B LTR ERVL 197 398 0 6 996 237 315 34 122 chr15 53958146 53958294 -49536680 - LTR85c LTR Gypsy? -630 193 59 6 996 330 263 0 0 chr15 53958298 53958374 -49536600 + MIR SINE MIR 160 235 -27 6 996 547 293 35 18 chr15 53958788 53958958 -49536016 - MER5A DNA MER1_type -9 180 8 6 996 247 169 34 0 chr15 53959201 53959260 -49535714 + (CAGA)n Simple_repeat Simple_repeat 4 64 0 6 996 293 382 49 38 chr15 53959419 53959604 -49535370 + LTR16A LTR ERVL 84 270 -181 6 996 399 73 0 0 chr15 53959692 53959747 -49535227 + (TCC)n Simple_repeat Simple_repeat 3 57 0 6 996 180 200 0 0 chr15 53960009 53960049 -49534925 + (CATA)n Simple_repeat Simple_repeat 2 41 0 6 996 223 271 119 0 chr15 53960080 53960139 -49534835 - ID4_ SINE ID -14 69 4 6 996 258 352 76 35 chr15 53960487 53960631 -49534343 + L3 LINE CR1 4329 4478 -11 6 996 1915 170 0 9 chr15 53962360 53962692 -49532282 + ORR1A4 LTR MaLR 1 329 0 6 996 228 358 56 40 chr15 53964299 53964424 -49530550 + MIRc SINE MIR 31 157 -111 6 996 1131 189 0 4 chr15 53964489 53964717 -49530257 + L1Md_F2 LINE L1 111 337 -6282 6 996 31639 72 2 1 chr15 53964710 53969639 -49525335 + L1Md_F2 LINE L1 563 5589 -297 6 996 8088 51 0 0 chr15 53969639 53970623 -49524351 + L1Md_F2 LINE L1 5590 6573 -12 6 996 1705 132 63 87 chr15 53970961 53971294 -49523680 - ORR1A4 LTR MaLR -4 325 1 6 996 21536 159 27 50 chr15 53971811 53973542 -49521432 + L1_Mus4 LINE L1 664 2390 -3493 6 996 4697 42 2 5 chr15 53973542 53974114 -49520860 + L1Md_F2 LINE L1 6012 6581 -1 6 996 21536 157 26 66 chr15 53974114 53977010 -49517964 + L1_Mus4 LINE L1 2391 5141 -742 6 996 6381 65 6 5 chr15 53977010 53977839 -49517135 + L1_Mus1 LINE L1 5738 6567 0 6 996 21536 133 11 21 chr15 53977839 53979365 -49515609 + L1_Mus4 LINE L1 5142 6636 0 6 996 346 281 213 53 chr15 53979474 53979681 -49515293 + L1MB5 LINE L1 5642 5881 -293 6 996 2856 146 8 47 chr15 53979683 53980194 -49514780 + Lx3B LINE L1 6481 6971 -2 6 996 24 0 0 0 chr15 53980200 53980224 -49514750 + AT_rich Low_complexity Low_complexity 1 24 0 6 996 340 264 73 0 chr15 53980255 53980365 -49514609 + L1MB5 LINE L1 5924 6041 -137 6 996 615 205 17 0 chr15 53980445 53980562 -49514412 + PB1D9 SINE Alu 1 119 -1 6 996 486 0 0 0 chr15 53980566 53980620 -49514354 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 996 858 319 62 72 chr15 53980741 53981608 -49513366 + L1MC3 LINE L1 6906 7764 -21 6 996 645 303 31 21 chr15 53981751 53981772 -49513202 - B4 SINE B4 0 292 272 6 996 390 91 0 0 chr15 53981772 53981827 -49513147 + (CGTG)n Simple_repeat Simple_repeat 1 55 0 6 996 645 303 31 21 chr15 53981827 53981997 -49512977 - B4 SINE B4 -21 271 100 6 996 618 39 0 0 chr15 53983664 53983741 -49511233 + (TTCC)n Simple_repeat Simple_repeat 3 79 0 6 996 674 272 115 51 chr15 53983741 53984055 -49510919 - Lx5 LINE L1 -18 7032 6699 6 996 22 56 0 0 chr15 53984637 53984673 -49510301 + AT_rich Low_complexity Low_complexity 1 36 0 6 996 207 0 0 0 chr15 53986781 53986804 -49508170 + (A)n Simple_repeat Simple_repeat 1 23 0 6 996 189 0 0 0 chr15 53986804 53986825 -49508149 + (GA)n Simple_repeat Simple_repeat 2 22 0 6 996 225 0 0 0 chr15 53987513 53987538 -49507436 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 996 360 0 0 0 chr15 53987538 53987577 -49507397 + (GA)n Simple_repeat Simple_repeat 2 41 0 6 996 1349 164 4 0 chr15 53987692 53987918 -49507056 + Lx3B LINE L1 6233 6459 -514 6 996 414 359 17 61 chr15 53987950 53988131 -49506843 + B4A SINE B4 2 174 -118 6 996 447 152 0 0 chr15 53988135 53988214 -49506760 + (CAA)n Simple_repeat Simple_repeat 3 81 0 6 996 188 111 28 0 chr15 53988329 53988365 -49506609 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 996 241 102 0 58 chr15 53988366 53988418 -49506556 + G-rich Low_complexity Low_complexity 2 50 0 6 996 238 297 10 29 chr15 53988570 53988674 -49506300 + MER34 LTR ERV1 372 473 -69 6 996 236 196 39 0 chr15 53990186 53990237 -49504737 + (TTATA)n Simple_repeat Simple_repeat 5 57 0 6 996 282 56 0 0 chr15 53990291 53990327 -49504647 + (TATG)n Simple_repeat Simple_repeat 4 39 0 6 996 497 317 54 16 chr15 53990794 53990980 -49503994 - MER21B LTR ERV1 -557 306 114 6 996 434 287 115 51 chr15 53991307 53991638 -49503336 - MLT1B LTR MaLR -34 340 7 6 996 420 37 0 0 chr15 53992543 53992597 -49502377 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 996 378 0 0 0 chr15 53992597 53992638 -49502336 + (GA)n Simple_repeat Simple_repeat 1 42 0 6 996 1230 212 25 99 chr15 53993431 53993786 -49501188 - Lx6 LINE L1 -4 7456 7128 6 996 311 315 23 8 chr15 53994142 53994273 -49500701 - L1MB5 LINE L1 -8 6166 6034 6 996 583 346 45 38 chr15 53994332 53994623 -49500351 - MLT1E1A LTR MaLR -2 678 386 6 996 209 194 0 0 chr15 53994720 53994756 -49500218 + GA-rich Low_complexity Low_complexity 2 37 0 6 996 418 299 14 14 chr15 53995486 53995625 -49499349 + ID_B1 SINE B4 82 220 -4 6 996 21 0 0 0 chr15 53995780 53995801 -49499173 + GC_rich Low_complexity Low_complexity 1 21 0 6 996 265 335 42 95 chr15 53996839 53997007 -49497967 + L3 LINE CR1 4331 4489 0 6 996 197 294 20 0 chr15 53997470 53997521 -49497453 - MIR SINE MIR -62 146 95 6 996 611 26 13 0 chr15 53998248 53998325 -49496649 + (TC)n Simple_repeat Simple_repeat 1 78 0 6 996 1479 245 52 19 chr15 53999373 53999735 -49495239 - MTEa LTR MaLR 0 379 6 6 996 657 300 24 8 chr15 54000023 54000275 -49494699 + L1MB5 LINE L1 5882 6137 -37 1 996 731 277 10 24 chr15 54000461 54000668 -49494306 - B3 SINE B2 -12 204 1 2 996 468 0 0 0 chr15 54001504 54001556 -49493418 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 997 311 319 80 42 chr15 54001701 54001914 -49493060 - L1M5 LINE L1 -744 5496 5276 4 997 391 309 65 22 chr15 54002068 54002207 -49492767 + RSINE1 SINE B4 14 158 -7 5 997 387 60 0 0 chr15 54002220 54002270 -49492704 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 997 304 295 13 13 chr15 54002358 54002437 -49492537 - ID4_ SINE ID -2 81 3 7 997 291 384 94 33 chr15 54002555 54002768 -49492206 - MIRb SINE MIR 0 268 43 8 997 749 184 6 0 chr15 54002954 54003112 -49491862 + GA-rich Low_complexity Low_complexity 2 160 0 9 997 502 308 68 12 chr15 54004994 54005155 -49489819 - ID_B1 SINE B4 -3 221 52 1 997 3801 168 61 13 chr15 54005714 54006487 -49488487 - Lx3B LINE L1 -4 6969 6160 1 997 186 371 73 58 chr15 54007627 54007833 -49487141 - MIRb SINE MIR -34 234 26 1 997 645 14 0 0 chr15 54008489 54008563 -49486411 + (TTCC)n Simple_repeat Simple_repeat 2 75 0 1 997 378 0 0 0 chr15 54008810 54008852 -49486122 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 997 542 314 47 10 chr15 54009446 54009639 -49485335 - LTR33 LTR ERVL -5 510 311 1 997 265 359 53 98 chr15 54009663 54009907 -49485067 + MER110A LTR ERV1 95 327 -141 1 997 266 294 102 105 chr15 54009940 54010244 -49484730 + ORR1E LTR MaLR 45 347 -12 1 997 431 269 75 30 chr15 54010398 54010532 -49484442 - MTEa LTR MaLR -8 371 232 1 997 505 320 33 95 chr15 54010539 54010812 -49484162 - MTEa LTR MaLR -123 256 1 1 997 225 83 0 0 chr15 54011085 54011121 -49483853 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 997 192 97 0 0 chr15 54011200 54011231 -49483743 + (CAAA)n Simple_repeat Simple_repeat 3 33 0 2 997 309 322 132 0 chr15 54011687 54011808 -49483166 - L1MC4 LINE L1 -133 7909 7773 2 997 317 378 16 16 chr15 54011863 54012054 -49482920 - L1MC4 LINE L1 -364 7678 7488 2 997 3172 11 3 16 chr15 54012386 54012758 -49482216 - IAPLTR1_Mm LTR ERVK 0 367 1 2 997 52936 23 16 2 chr15 54012758 54019141 -49475833 - IAPEz-int LTR ERVK 0 6481 8 2 997 3172 11 3 16 chr15 54019141 54019513 -49475461 - IAPLTR1_Mm LTR ERVK 0 367 1 2 997 196 111 22 22 chr15 54019595 54019641 -49475333 + (TATAA)n Simple_repeat Simple_repeat 4 49 0 2 997 368 277 104 24 chr15 54019992 54020203 -49474771 + MIR SINE MIR 7 234 -28 2 997 4166 50 9 2 chr15 54020478 54021002 -49473972 + L1_Mus1 LINE L1 6040 6567 0 2 997 2334 184 48 8 chr15 54021118 54021621 -49473353 - Lx9 LINE L1 -2 7642 7120 2 997 444 333 51 40 chr15 54021735 54021910 -49473064 + B3A SINE B2 1 177 -21 2 997 201 74 0 0 chr15 54021910 54021937 -49473037 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 2 997 229 424 51 17 chr15 54022169 54022404 -49472570 - LTR33 LTR ERVL -2 513 271 2 997 192 216 0 0 chr15 54025834 54025885 -49469089 + (TATG)n Simple_repeat Simple_repeat 4 54 0 3 997 29 28 0 0 chr15 54025896 54025932 -49469042 + AT_rich Low_complexity Low_complexity 1 36 0 3 997 446 203 8 0 chr15 54025958 54026081 -49468893 + (TA)n Simple_repeat Simple_repeat 2 125 0 3 997 474 91 0 54 chr15 54026319 54026412 -49468562 + (GAAA)n Simple_repeat Simple_repeat 3 90 0 3 997 282 365 150 12 chr15 54026817 54027144 -49467830 + L2c LINE L2 3022 3373 -2 3 997 650 345 58 50 chr15 54027631 54027991 -49466983 + MTEb LTR MaLR 6 368 -11 3 997 202 73 0 47 chr15 54028042 54028085 -49466889 + (TTTTG)n Simple_repeat Simple_repeat 3 43 0 3 997 4858 177 73 23 chr15 54028596 54029567 -49465407 - RLTR25B LTR ERVK -1 1027 8 3 997 683 360 94 9 chr15 54029574 54030019 -49464955 - MLT2F LTR ERVL -48 615 133 3 997 216 97 0 0 chr15 54030628 54030659 -49464315 + (TATATG)n Simple_repeat Simple_repeat 5 35 0 3 997 182 354 63 0 chr15 54031222 54031301 -49463673 - L2c LINE L2 -5 3382 3299 4 997 287 148 0 36 chr15 54031517 54031601 -49463373 + T-rich Low_complexity Low_complexity 1 81 0 4 997 1052 95 0 20 chr15 54031602 54031753 -49463221 - B1_Mus1 SINE Alu 0 148 1 4 997 334 328 159 47 chr15 54032223 54032582 -49462392 - MLT1A1 LTR MaLR -5 403 5 4 997 283 342 151 38 chr15 54032904 54033173 -49461801 + MLT1A0 LTR MaLR 11 317 -48 4 997 1035 271 24 109 chr15 54033173 54033587 -49461387 - MTE2a LTR MaLR 0 379 1 4 997 283 342 151 38 chr15 54033587 54033636 -49461338 + MLT1A0 LTR MaLR 318 365 0 4 997 279 350 123 54 chr15 54035227 54035357 -49459617 - LTR16A1 LTR ERVL -284 172 34 4 997 189 0 0 0 chr15 54035442 54035463 -49459511 + (TC)n Simple_repeat Simple_repeat 2 22 0 4 997 180 0 0 0 chr15 54035569 54035589 -49459385 + (T)n Simple_repeat Simple_repeat 1 20 0 4 997 4660 56 22 5 chr15 54035648 54036245 -49458729 - L1Md_F2 LINE L1 -13 6569 5963 4 997 243 0 0 0 chr15 54036245 54036272 -49458702 + (T)n Simple_repeat Simple_repeat 1 27 0 5 997 36292 47 3 17 chr15 54036272 54042835 -49452139 - L1Md_T LINE L1 0 6585 133 5 997 2900 25 8 0 chr15 54042831 54043225 -49451749 - L1Md_Gf LINE L1 -6001 521 125 5 997 240 111 0 0 chr15 54043259 54043295 -49451679 + (TTAA)n Simple_repeat Simple_repeat 2 37 0 5 997 2919 193 67 5 chr15 54043295 54043893 -49451081 - Lx5 LINE L1 -20 7030 6396 5 997 3655 67 21 4 chr15 54043964 54044467 -49450507 + L1_Mus1 LINE L1 6070 6567 0 5 997 252 232 18 0 chr15 54045672 54045728 -49449246 + CT-rich Low_complexity Low_complexity 1 57 0 5 997 1277 267 64 17 chr15 54045821 54046229 -49448745 + Lx7 LINE L1 6956 7382 -314 5 997 357 24 0 0 chr15 54046251 54046293 -49448681 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 997 26 30 0 0 chr15 54046391 54046424 -49448550 + AT_rich Low_complexity Low_complexity 1 33 0 5 997 186 380 59 35 chr15 54047370 54047539 -49447435 - MIRb SINE MIR -80 188 16 6 997 26 0 0 0 chr15 54047933 54047959 -49447015 + AT_rich Low_complexity Low_complexity 1 26 0 6 997 216 378 31 23 chr15 54048212 54048342 -49446632 + MIRm SINE MIR 39 169 -107 6 997 1175 320 71 17 chr15 54048666 54049244 -49445730 - Lx8 LINE L1 -61 7412 6804 6 997 1682 283 178 34 chr15 54049344 54049967 -49445007 + Lx8 LINE L1 6369 7088 -385 6 997 4444 134 40 16 chr15 54049967 54050757 -49444217 - RMER17D2 LTR ERVK 0 809 1 6 997 1682 282 43 42 chr15 54050757 54050871 -49444103 + Lx8 LINE L1 7089 7196 -277 6 997 1875 173 57 0 chr15 54050883 54051219 -49443755 + ORR1B2 LTR MaLR 4 358 -9 6 997 186 189 0 0 chr15 54051788 54051825 -49443149 + CT-rich Low_complexity Low_complexity 3 39 0 6 997 23 33 0 0 chr15 54052529 54052559 -49442415 + AT_rich Low_complexity Low_complexity 1 30 0 6 997 715 351 91 45 chr15 54052705 54053210 -49441764 + MLT1F2 LTR MaLR 31 558 -2 6 997 1226 54 0 0 chr15 54053528 54053676 -49441298 + B1_Mus1 SINE Alu 1 148 0 7 997 222 150 0 0 chr15 54053682 54053722 -49441252 + (A)n Simple_repeat Simple_repeat 1 40 0 7 997 267 252 47 8 chr15 54053859 54053987 -49440987 + Lx9 LINE L1 7512 7644 0 7 997 619 98 16 24 chr15 54054185 54054311 -49440663 + (TA)n Simple_repeat Simple_repeat 1 125 0 7 997 238 202 0 17 chr15 54054494 54054561 -49440413 + L1MB1 LINE L1 5399 5464 -707 7 997 724 287 25 25 chr15 54054587 54054787 -49440187 + ID_B1 SINE B4 2 201 -23 7 997 316 358 33 16 chr15 54054690 54054812 -49440162 + B1F SINE Alu 24 147 -2 7 997 380 239 130 0 chr15 54054813 54054951 -49440023 + L1MB1 LINE L1 5577 5732 -436 7 997 1123 215 14 18 chr15 54055271 54055494 -49439480 - URR1B DNA MER1_type -3 222 1 7 997 397 201 63 84 chr15 54055497 54055671 -49439303 + L1MB1 LINE L1 5970 6138 -174 7 997 769 210 0 14 chr15 54057533 54057673 -49437301 + B1_Mur4 SINE Alu 2 139 -11 7 997 714 55 0 0 chr15 54057687 54057778 -49437196 + (GA)n Simple_repeat Simple_repeat 1 91 0 7 997 673 298 46 14 chr15 54058433 54058651 -49436323 + MLT1A0 LTR MaLR 102 326 -39 8 997 215 340 0 78 chr15 54058760 54058862 -49436112 - L2c LINE L2 -1 3386 3293 8 997 189 162 54 0 chr15 54060418 54060455 -49434519 + MIRm SINE MIR 228 266 -10 8 997 380 330 108 5 chr15 54061024 54061219 -49433755 - Lx8 LINE L1 -137 7336 7122 8 997 1327 278 25 11 chr15 54061241 54061681 -49433293 + Lx8 LINE L1 6585 7030 -443 8 997 896 138 0 7 chr15 54062031 54062177 -49432797 + URR1A DNA MER1_type 81 225 -1 8 997 917 238 5 15 chr15 54062785 54062971 -49432003 + B3 SINE B2 1 187 -29 8 997 183 80 0 0 chr15 54062971 54062996 -49431978 + (CAA)n Simple_repeat Simple_repeat 2 26 0 8 997 917 238 5 15 chr15 54062996 54063014 -49431960 + B3 SINE B2 188 203 -13 8 997 27 49 0 0 chr15 54063071 54063112 -49431862 + AT_rich Low_complexity Low_complexity 1 41 0 8 997 781 198 239 31 chr15 54065261 54065412 -49429562 - ORR1C2 LTR MaLR 0 384 189 8 997 180 0 0 0 chr15 54065412 54065432 -49429542 + (GA)n Simple_repeat Simple_repeat 2 21 0 9 997 781 198 239 31 chr15 54065432 54065598 -49429376 - ORR1C2 LTR MaLR -196 188 1 8 997 236 330 226 27 chr15 54066521 54066702 -49428272 + MIRb SINE MIR 4 220 -42 9 997 216 130 0 0 chr15 54066885 54066931 -49428043 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 9 997 1301 331 83 30 chr15 54066933 54067813 -49427161 - Lx7 LINE L1 -240 7233 6295 9 997 22 0 0 0 chr15 54069395 54069417 -49425557 + AT_rich Low_complexity Low_complexity 1 22 0 9 997 289 341 80 59 chr15 54069965 54070152 -49424822 + MLT1D LTR MaLR 315 505 0 9 997 1513 196 32 8 chr15 54070300 54070620 -49424354 + Lx5 LINE L1 6758 7050 0 9 997 472 331 0 41 chr15 54071423 54071593 -49423381 - ID_B1 SINE B4 -1 223 61 9 997 190 314 0 14 chr15 54073328 54073399 -49421575 + MIRb SINE MIR 185 254 -14 9 997 199 250 98 16 chr15 54073744 54073805 -49421169 + MER5A DNA MER1_type 96 161 -28 9 997 305 327 27 9 chr15 54075862 54075973 -49419001 + PB1D9 SINE Alu 2 114 -6 1 997 396 0 0 0 chr15 54076987 54077031 -49417943 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 997 543 282 61 0 chr15 54077708 54077839 -49417135 + ID_B1 SINE B4 84 222 -2 1 997 304 346 122 92 chr15 54077847 54078118 -49416856 + B4 SINE B4 4 282 -10 1 997 237 33 0 0 chr15 54078132 54078162 -49416812 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 997 258 32 0 0 chr15 54078287 54078318 -49416656 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 997 212 250 0 0 chr15 54078509 54078561 -49416413 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 997 533 270 7 28 chr15 54078572 54078713 -49416261 + B1F1 SINE Alu 12 149 0 1 997 1479 128 0 0 chr15 54078847 54079096 -49415878 + L1_Mur2 LINE L1 4500 4748 -1129 1 997 260 216 88 0 chr15 54079096 54079198 -49415776 + L1MC4a LINE L1 5263 5373 -2622 1 997 665 280 53 12 chr15 54079207 54079377 -49415597 + B3A SINE B2 6 182 -16 1 997 405 269 6 82 chr15 54079380 54079562 -49415412 + L1MC4a LINE L1 6602 6769 -1113 1 997 475 296 12 59 chr15 54079592 54079761 -49415213 - RSINE1 SINE B4 -1 164 4 1 997 707 89 0 18 chr15 54080756 54080870 -49414104 - Lx2 LINE L1 0 6997 6886 1 997 3052 115 244 3 chr15 54081041 54081626 -49413348 - Lx2 LINE L1 0 6997 6272 1 997 424 333 41 7 chr15 54081631 54081776 -49413198 - MLT1D LTR MaLR -322 183 34 1 997 896 161 0 39 chr15 54087288 54087430 -49407544 + B1_Mur3 SINE Alu 1 138 -11 1 997 189 0 0 0 chr15 54087430 54087451 -49407523 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 997 896 161 0 39 chr15 54087451 54087463 -49407511 + B1_Mur3 SINE Alu 139 149 0 1 997 225 269 49 88 chr15 54087820 54087922 -49407052 - Tigger10 DNA Tigger -460 1383 1286 1 997 277 267 20 81 chr15 54090126 54090278 -49404696 - B1_Mur1 SINE Alu 0 149 1 1 997 336 323 90 30 chr15 54092267 54092468 -49402506 - L2a LINE L2 -33 3393 3181 1 997 336 175 0 0 chr15 54092624 54092687 -49402287 + (TTCA)n Simple_repeat Simple_repeat 1 63 0 1 997 305 74 0 0 chr15 54092815 54092869 -49402105 + Lx LINE L1 6597 6650 -4 1 997 228 35 0 0 chr15 54093224 54093253 -49401721 + (T)n Simple_repeat Simple_repeat 1 29 0 1 997 1306 46 11 0 chr15 54095070 54095245 -49399729 + L1Md_F3 LINE L1 6405 6581 -3 1 997 288 0 0 0 chr15 54095256 54095288 -49399686 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 1 997 476 322 62 0 chr15 54097352 54097498 -49397476 + ID_B1 SINE B4 61 215 -9 1 997 204 136 59 29 chr15 54097498 54097566 -49397408 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 997 378 0 0 0 chr15 54098559 54098601 -49396373 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 997 299 193 89 81 chr15 54099175 54099299 -49395675 - MIRb SINE MIR -39 229 105 1 997 324 217 32 21 chr15 54099297 54099391 -49395583 - MIRb SINE MIR -83 185 91 1 997 471 35 0 0 chr15 54100107 54100164 -49394810 + (TAA)n Simple_repeat Simple_repeat 2 58 0 1 997 305 240 48 9 chr15 54102905 54103010 -49391964 + L1MA9 LINE L1 6092 6200 -112 1 997 398 196 11 0 chr15 54103063 54103155 -49391819 + (TA)n Simple_repeat Simple_repeat 2 94 0 1 997 733 336 32 11 chr15 54103181 54103458 -49391516 - B4A SINE B4 -2 290 8 1 997 28 0 0 0 chr15 54104093 54104121 -49390853 + AT_rich Low_complexity Low_complexity 1 28 0 1 997 27 0 0 0 chr15 54104768 54104795 -49390179 + AT_rich Low_complexity Low_complexity 1 27 0 1 997 300 111 0 0 chr15 54104795 54104840 -49390134 + (CAGA)n Simple_repeat Simple_repeat 4 48 0 1 997 1236 237 37 99 chr15 54104853 54105256 -49389718 + MTE2a LTR MaLR 1 378 -1 1 997 482 317 126 42 chr15 54105277 54105755 -49389219 + MER20B DNA MER1_type 260 777 -6 1 997 310 173 13 13 chr15 54106374 54106450 -49388524 + GA-rich Low_complexity Low_complexity 4 79 0 1 997 183 297 123 47 chr15 54107435 54107541 -49387433 + MIRm SINE MIR 161 274 -2 1 997 446 299 57 25 chr15 54108306 54108464 -49386510 - RSINE1 SINE B4 0 165 3 1 997 1136 190 24 0 chr15 54108498 54108703 -49386271 + B3 SINE B2 1 210 -6 1 997 194 208 19 0 chr15 54108741 54108794 -49386180 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 997 205 156 0 43 chr15 54109478 54109525 -49385449 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 1 997 781 303 68 57 chr15 54111282 54111618 -49383356 + MTD LTR MaLR 26 365 -54 1 997 243 88 0 0 chr15 54111883 54111917 -49383057 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 1 997 654 213 6 124 chr15 54111918 54112079 -49382895 - B1_Mur3 SINE Alu -2 147 6 1 997 316 267 67 34 chr15 54112096 54112185 -49382789 + B4A SINE B4 114 205 -87 1 997 291 280 110 71 chr15 54112184 54112311 -49382663 - B4A SINE B4 -155 137 6 1 997 205 320 103 67 chr15 54112488 54112682 -49382292 + MIRb SINE MIR 37 237 -31 1 997 284 367 30 23 chr15 54112726 54112857 -49382117 - ID_B1 SINE B4 -13 211 80 1 997 1388 29 6 0 chr15 54114201 54114374 -49380600 + (TCTA)n Simple_repeat Simple_repeat 1 174 0 1 997 708 33 22 0 chr15 54114530 54114622 -49380352 - L1Md_F3 LINE L1 -519 6065 5972 1 997 4294 42 21 2 chr15 54114622 54115149 -49379825 + L1Md_F3 LINE L1 6048 6584 0 1 997 2015 156 30 33 chr15 54115486 54115850 -49379124 + ORR1B2 LTR MaLR 1 363 -4 1 997 4316 103 21 94 chr15 54116019 54116810 -49378164 + RMER17A LTR ERVK 4 737 -14 1 997 998 293 76 11 chr15 54117578 54117934 -49377040 + MTEa LTR MaLR 1 379 0 1 997 4213 136 7 3 chr15 54119787 54120518 -49374456 - L1_Mur2 LINE L1 -471 5406 4673 1 997 5995 136 6 34 chr15 54120511 54121719 -49373255 + Lx LINE L1 5419 6592 -62 1 997 308 345 0 0 chr15 54122170 54122254 -49372720 + PB1D10 SINE Alu 1 84 -33 1 997 255 284 32 0 chr15 54122259 54122354 -49372620 + GA-rich Low_complexity Low_complexity 4 101 0 1 997 666 37 0 0 chr15 54122356 54122437 -49372537 + (GGGA)n Simple_repeat Simple_repeat 1 81 0 1 997 1090 99 0 12 chr15 54122451 54122624 -49372350 + (GGAA)n Simple_repeat Simple_repeat 1 171 0 1 997 849 126 15 0 chr15 54123294 54123429 -49371545 - B1_Mur2 SINE Alu 0 149 13 1 997 615 236 20 26 chr15 54123429 54123446 -49371528 - ID_B1 SINE B4 0 224 74 1 997 339 268 96 27 chr15 54123590 54123736 -49371238 - Lx7 LINE L1 -314 7382 7227 1 997 7746 65 0 1 chr15 54123751 54125405 -49369569 - L1Md_F2 LINE L1 0 6582 4930 1 997 646 302 65 8 chr15 54125403 54125663 -49369311 - Lx7 LINE L1 -459 7237 6963 1 997 398 224 216 11 chr15 54125684 54125860 -49369114 - B3 SINE B2 0 216 5 1 997 212 371 123 20 chr15 54126489 54126635 -49368339 + MIR SINE MIR 4 164 -98 1 997 30 0 0 0 chr15 54127504 54127534 -49367440 + AT_rich Low_complexity Low_complexity 1 30 0 1 997 264 59 0 0 chr15 54128114 54128148 -49366826 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 997 241 236 14 0 chr15 54128792 54128864 -49366110 - L1MA10 LINE L1 -7 6327 6255 1 997 1028 211 8 47 chr15 54129031 54129265 -49365709 - URR1B DNA MER1_type 0 225 1 1 997 182 264 57 0 chr15 54129443 54129496 -49365478 - MIRm SINE MIR -1 275 220 1 997 269 26 0 26 chr15 54129652 54129691 -49365283 + (TTG)n Simple_repeat Simple_repeat 1 38 0 1 997 443 291 23 8 chr15 54129696 54129824 -49365150 - B1_Mur2 SINE Alu -17 132 3 1 997 2802 277 46 29 chr15 54129828 54130682 -49364292 + Lx9 LINE L1 6426 7296 -348 1 997 1854 172 65 44 chr15 54130682 54131094 -49363880 - MTC LTR MaLR 0 421 1 1 997 2802 277 46 29 chr15 54131094 54131238 -49363736 + Lx9 LINE L1 7297 7441 -203 1 997 28 0 0 0 chr15 54131363 54131391 -49363583 + AT_rich Low_complexity Low_complexity 1 28 0 1 997 229 353 72 48 chr15 54132057 54132182 -49362792 - L2b LINE L2 -22 3353 3226 1 997 405 0 0 0 chr15 54132617 54132662 -49362312 + (TC)n Simple_repeat Simple_repeat 1 45 0 1 124 1170 299 61 26 chr15 54132706 54133166 -49361808 - Lx7 LINE L1 -330 7366 6891 1 998 384 316 59 9 chr15 54134064 54134234 -49360740 - MLT1L LTR MaLR -82 513 330 1 998 338 0 24 0 chr15 54135960 54136002 -49358972 + (TAG)n Simple_repeat Simple_repeat 1 43 0 1 998 279 0 0 0 chr15 54136002 54136033 -49358941 + (TTG)n Simple_repeat Simple_repeat 2 32 0 1 998 189 0 0 0 chr15 54136724 54136745 -49358229 + (TTG)n Simple_repeat Simple_repeat 2 22 0 1 998 1209 297 39 25 chr15 54136777 54137219 -49357755 - Lx6 LINE L1 -35 7425 6978 1 998 1321 258 50 23 chr15 54137195 54137671 -49357303 - Lx6 LINE L1 -574 6886 6222 1 998 358 15 91 0 chr15 54138743 54138809 -49356165 + (TTTTTG)n Simple_repeat Simple_repeat 1 72 0 1 998 220 302 80 40 chr15 54138992 54139092 -49355882 - MIRb SINE MIR -76 192 89 1 998 213 257 26 79 chr15 54139461 54139537 -49355437 + ID4_ SINE ID 11 82 -1 1 998 1786 187 6 3 chr15 54140572 54140900 -49354074 + ORR1A4 LTR MaLR 1 329 0 1 998 519 376 35 91 chr15 54141312 54141791 -49353183 - MLT1E1 LTR MaLR -78 576 3 1 998 266 337 166 43 chr15 54141827 54142188 -49352786 + L2a LINE L2 2799 3203 -223 1 998 3767 166 26 15 chr15 54142419 54143103 -49351871 + RLTR17 LTR ERVK 1 692 0 1 998 206 236 13 89 chr15 54143107 54143186 -49351788 + L3 LINE CR1 4182 4254 -235 1 998 234 62 0 0 chr15 54143238 54143270 -49351704 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1 998 261 0 0 0 chr15 54143457 54143486 -49351488 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 998 2594 163 43 19 chr15 54144048 54144586 -49350388 - Lx3C LINE L1 -50 6926 6376 1 998 3016 68 18 0 chr15 54144586 54144983 -49349991 - L1Md_F2 LINE L1 0 6582 6179 1 998 3260 123 6 20 chr15 54144983 54145706 -49349268 - L1Md_Gf LINE L1 -5806 1283 610 1 998 265 98 0 0 chr15 54145707 54145748 -49349226 - Lx3C LINE L1 -587 6389 6349 2 998 6632 29 2 20 chr15 54146133 54146236 -49348738 - L1Md_F3 LINE L1 -1 6583 6489 2 998 3434 23 5 0 chr15 54146236 54146630 -49348344 + MTA_Mm LTR MaLR 1 396 0 2 998 9112 38 2 1 chr15 54146633 54147727 -49347247 + MTA_Mm-int LTR MaLR 4 1098 0 2 998 3471 23 2 0 chr15 54147727 54148122 -49346852 + MTA_Mm LTR MaLR 1 396 0 2 998 6632 29 2 20 chr15 54148122 54148821 -49346153 - L1Md_F3 LINE L1 -96 6488 5791 2 998 297 0 0 0 chr15 54151008 54151041 -49343933 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2 998 864 293 24 20 chr15 54151041 54151337 -49343637 - Lx5 LINE L1 -19 7031 6735 2 998 279 371 38 5 chr15 54152056 54152267 -49342707 + L1MB5 LINE L1 5836 6053 -121 2 998 1066 69 0 0 chr15 54152554 54152699 -49342275 + L1_Mus1 LINE L1 6392 6536 -31 2 998 5896 55 3 7 chr15 54152700 54153451 -49341523 + L1Md_F2 LINE L1 5835 6582 0 2 998 272 328 25 0 chr15 54153525 54153647 -49341327 + L1MB5 LINE L1 6026 6150 -24 2 998 354 320 147 11 chr15 54153959 54154136 -49340838 + B3A SINE B2 3 203 -13 2 998 364 296 57 75 chr15 54154431 54154643 -49340331 + L1MCb LINE L1 17 224 -5821 2 998 1699 203 8 60 chr15 54154645 54155044 -49339930 + ORR1C1 LTR MaLR 1 378 0 2 998 403 347 19 61 chr15 54155215 54155427 -49339547 - RMER15 LTR ERVL -158 417 215 2 998 225 0 0 0 chr15 54155633 54155658 -49339316 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 998 483 279 129 11 chr15 54156291 54156577 -49338397 + L1MCb LINE L1 823 1142 -4903 2 998 451 167 6 56 chr15 54156589 54156735 -49338239 + (TA)n Simple_repeat Simple_repeat 1 141 0 2 998 531 82 0 0 chr15 54156735 54156808 -49338166 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 2 998 451 167 6 56 chr15 54156808 54156839 -49338135 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 998 253 305 8 17 chr15 54156843 54156963 -49338011 + (CATA)n Simple_repeat Simple_repeat 1 119 0 2 998 627 14 0 0 chr15 54157105 54157177 -49337797 + (TAGA)n Simple_repeat Simple_repeat 1 72 0 2 998 311 127 28 0 chr15 54157199 54157270 -49337704 + (TCTCTG)n Simple_repeat Simple_repeat 6 78 0 2 998 435 78 0 0 chr15 54157443 54157507 -49337467 + (TA)n Simple_repeat Simple_repeat 2 65 0 2 998 2253 55 0 0 chr15 54158398 54158689 -49336285 - L1Md_F2 LINE L1 -696 5886 5596 2 998 984 94 25 18 chr15 54158689 54158852 -49336122 + L1Md_F2 LINE L1 6408 6571 -11 2 998 197 110 35 47 chr15 54158955 54158964 -49336010 + (TA)n Simple_repeat Simple_repeat 1 9 0 2 998 1130 88 0 0 chr15 54158964 54159111 -49335863 + B1_Mus1 SINE Alu 1 147 -1 2 998 197 110 35 47 chr15 54159111 54159187 -49335787 + (TA)n Simple_repeat Simple_repeat 1 76 0 2 998 1471 305 125 12 chr15 54159373 54160518 -49334456 + Lx8 LINE L1 6192 7464 -9 2 998 240 59 0 0 chr15 54160553 54160587 -49334387 + (A)n Simple_repeat Simple_repeat 1 34 0 2 998 291 120 100 0 chr15 54160588 54160638 -49334336 + U1 snRNA snRNA 21 75 -90 2 998 266 50 25 0 chr15 54160716 54160756 -49334218 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 998 217 229 0 0 chr15 54161151 54161212 -49333762 + T-rich Low_complexity Low_complexity 1 61 0 2 998 5021 69 37 3 chr15 54161497 54162168 -49332806 - Lx3_Mus LINE L1 0 7009 6316 2 998 2466 233 87 89 chr15 54162215 54162786 -49332188 - RCHARR1 DNA MER1_type -99 875 329 2 998 385 307 54 61 chr15 54162786 54163064 -49331910 - B4A SINE B4 -16 276 1 2 998 2466 233 87 89 chr15 54163064 54163369 -49331605 - RCHARR1 DNA MER1_type -646 328 1 2 998 208 253 85 32 chr15 54163488 54163582 -49331392 + MIR SINE MIR 116 214 -48 2 998 695 296 32 102 chr15 54164497 54164614 -49330360 - MLT1B LTR MaLR 0 390 297 2 998 1095 67 0 0 chr15 54164614 54164749 -49330225 + B1_Mm SINE Alu 1 135 -12 2 998 666 0 0 0 chr15 54164750 54164824 -49330150 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 2 998 695 296 32 102 chr15 54164824 54165046 -49329928 - MLT1B LTR MaLR -94 296 73 2 998 1322 231 55 0 chr15 54165256 54165546 -49329428 + Lx5 LINE L1 6742 7047 -3 2 998 214 356 56 33 chr15 54165989 54166169 -49328805 - MIR SINE MIR -51 211 28 2 998 300 91 0 0 chr15 54166417 54166461 -49328513 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 998 571 252 200 35 chr15 54166464 54166709 -49328265 - B4 SINE B4 -1 291 7 2 998 282 355 7 10 chr15 54167302 54167429 -49327545 - MIRb SINE MIR -22 186 65 2 998 373 319 18 35 chr15 54167695 54167864 -49327110 - L1MB1 LINE L1 -50 6118 5953 2 998 395 312 60 54 chr15 54167864 54168013 -49326961 + B3A SINE B2 42 191 -7 2 998 526 258 111 32 chr15 54168042 54168258 -49326716 - RMER5 LTR ERV1 -9 525 293 2 998 513 290 62 5 chr15 54168305 54168513 -49326461 + L1M3 LINE L1 3958 4177 -1963 2 998 213 194 0 0 chr15 54168600 54168636 -49326338 + polypyrimidine Low_complexity Low_complexity 1 36 0 2 998 322 240 149 14 chr15 54168800 54168948 -49326026 + L1M3 LINE L1 4274 4441 -1699 2 998 294 268 0 40 chr15 54169927 54170001 -49324973 + RSINE1 SINE B4 53 123 -42 2 998 234 0 0 0 chr15 54170004 54170030 -49324944 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 998 207 0 0 0 chr15 54170034 54170057 -49324917 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 998 376 111 28 0 chr15 54170057 54170128 -49324846 + (TA)n Simple_repeat Simple_repeat 1 74 0 2 998 364 377 29 102 chr15 54170352 54170665 -49324309 - B4A SINE B4 -2 290 1 2 998 1916 302 57 25 chr15 54170967 54171735 -49323239 - Lx9 LINE L1 -468 7176 6384 2 998 298 285 136 24 chr15 54171763 54171932 -49323042 + Lx9 LINE L1 7244 7431 -213 2 998 240 35 0 0 chr15 54171958 54171987 -49322987 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 998 1088 228 6 34 chr15 54172026 54172322 -49322652 + ORR1C2 LTR MaLR 1 384 0 2 998 4425 230 103 39 chr15 54172322 54172917 -49322057 + ORR1C2-int LTR MaLR 1 606 -764 2 998 252 0 0 0 chr15 54172917 54172945 -49322029 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 2 998 4425 230 103 39 chr15 54172945 54173636 -49321338 + ORR1C2-int LTR MaLR 607 1370 0 2 998 801 238 25 60 chr15 54173636 54173837 -49321137 + ORR1C2 LTR MaLR 1 194 -190 2 998 1217 76 0 34 chr15 54173842 54174167 -49320807 + (TCTCCC)n Simple_repeat Simple_repeat 1 314 0 2 998 568 237 74 0 chr15 54174167 54174302 -49320672 + ORR1C2 LTR MaLR 175 319 -65 2 998 936 144 96 17 chr15 54174302 54174479 -49320495 - B2_Mm2 SINE B2 -3 192 2 2 998 492 232 95 62 chr15 54174479 54174522 -49320452 + ORR1C2 LTR MaLR 309 351 -27 2 998 1140 75 7 0 chr15 54174559 54174705 -49320269 - B1_Mus1 SINE Alu -1 147 1 2 998 314 176 14 14 chr15 54174706 54174775 -49320199 + ORR1C2 LTR MaLR 309 377 -1 2 998 293 284 11 11 chr15 54174988 54175077 -49319897 - RMER15 LTR ERVL -215 360 272 2 998 1960 190 11 6 chr15 54175088 54175453 -49319521 - ORR1B2 LTR MaLR 0 367 1 2 998 395 100 17 0 chr15 54175459 54175519 -49319455 + ORR1C2 LTR MaLR 324 384 0 2 998 2434 118 70 82 chr15 54175843 54176331 -49318643 - RLTR45 LTR ERVK 0 482 1 2 998 1706 93 38 147 chr15 54176447 54176814 -49318160 - RLTR9F LTR ERVK -4 411 85 2 998 2123 31 0 0 chr15 54176814 54177068 -49317906 - L1Md_T LINE L1 -500 6082 5829 2 998 4081 42 0 0 chr15 54177068 54177563 -49317411 + L1Md_T LINE L1 6088 6582 0 2 998 695 62 10 0 chr15 54177568 54177665 -49317309 - RLTR9F LTR ERVK -317 98 1 2 998 751 333 63 42 chr15 54178260 54178545 -49316429 + B4A SINE B4 2 292 0 2 998 190 289 26 13 chr15 54179222 54179299 -49315675 - MIRb SINE MIR -17 251 174 2 998 436 122 8 46 chr15 54181195 54181319 -49313655 + Lx3A LINE L1 6842 6957 -24 2 998 241 208 21 0 chr15 54181541 54181589 -49313385 + MIR SINE MIR 55 103 -105 2 998 1273 312 50 42 chr15 54182122 54182641 -49312333 + RMER5 LTR ERV1 1 523 -11 2 998 219 36 0 0 chr15 54182869 54182897 -49312077 + (CCAA)n Simple_repeat Simple_repeat 1 28 0 2 998 7772 71 0 0 chr15 54183538 54184582 -49310392 + L1_Mus1 LINE L1 5524 6567 0 2 998 293 172 16 0 chr15 54184701 54184765 -49310209 + CT-rich Low_complexity Low_complexity 3 67 0 2 998 290 380 88 60 chr15 54185395 54185678 -49309296 + LTR16E2 LTR ERVL 4 294 -274 2 998 462 223 14 3 chr15 54185835 54185939 -49309035 - PB1D10 SINE Alu -21 127 22 2 998 260 240 30 0 chr15 54185979 54186053 -49308921 + LTR16E2 LTR ERVL 455 547 -21 2 998 6915 125 20 5 chr15 54186257 54187789 -49307185 + Lx LINE L1 5102 6647 -7 2 998 23 54 0 0 chr15 54187793 54187830 -49307144 + AT_rich Low_complexity Low_complexity 1 37 0 2 998 1871 97 15 4 chr15 54189150 54189420 -49305554 - L1Md_F2 LINE L1 0 6582 6310 2 998 360 348 88 65 chr15 54189810 54190151 -49304823 - MLT1A LTR MaLR 0 374 26 2 998 554 283 55 16 chr15 54190361 54190544 -49304430 + LTR16E2 LTR ERVL 325 514 -54 2 998 271 330 30 10 chr15 54190894 54190995 -49303979 + MLT1J1 LTR MaLR 41 143 -301 2 998 238 313 165 0 chr15 54191687 54191802 -49303172 - MIR3 SINE MIR -39 169 36 2 998 305 362 36 56 chr15 54192713 54192909 -49302065 + MIRb SINE MIR 48 239 -29 2 998 322 301 0 24 chr15 54193041 54193126 -49301848 - B1_Mur3 SINE Alu -65 84 2 2 998 293 284 81 0 chr15 54193063 54193137 -49301837 - B4 SINE B4 -143 149 70 2 998 317 256 17 5 chr15 54195282 54195375 -49299599 - PB1D10 SINE Alu -39 110 17 2 998 220 321 34 51 chr15 54195295 54195413 -49299561 - ID_B1 SINE B4 -48 176 61 2 998 601 294 147 33 chr15 54195421 54195972 -49299002 + L1MA6 LINE L1 5327 5940 -360 2 998 339 44 0 0 chr15 54196042 54196087 -49298887 + (TATG)n Simple_repeat Simple_repeat 2 46 0 2 998 830 262 0 37 chr15 54196199 54196413 -49298561 - Lx5 LINE L1 -7 7043 6838 2 998 248 292 14 14 chr15 54196739 54196812 -49298162 - L2a LINE L2 -7 3419 3347 2 998 693 137 0 0 chr15 54198013 54198144 -49296830 + (TG)n Simple_repeat Simple_repeat 2 132 0 2 998 670 241 44 12 chr15 54198194 54198354 -49296620 - B4 SINE B4 -120 172 8 2 998 299 278 65 36 chr15 54198562 54198745 -49296229 + MIRb SINE MIR 33 223 -45 2 998 296 259 0 0 chr15 54198927 54199008 -49295966 + MamRep564 Unknown Unknown 77 157 -200 2 998 246 302 94 0 chr15 54199015 54199111 -49295863 + L2 LINE L2 2779 2883 -536 2 998 768 62 205 0 chr15 54201754 54201866 -49293108 + B1_Mus1 SINE Alu 2 136 -12 2 998 342 0 0 0 chr15 54201867 54201905 -49293069 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 998 624 91 0 0 chr15 54202312 54202400 -49292574 + (TTA)n Simple_repeat Simple_repeat 3 90 0 2 998 385 156 11 43 chr15 54202400 54202494 -49292480 - Lx4A LINE L1 -7 7051 6961 3 998 2591 143 5 3 chr15 54202494 54202935 -49292039 - Lx4A LINE L1 -1068 5990 5558 3 998 251 367 134 13 chr15 54203268 54203417 -49291557 - LTR16A LTR ERVL -254 197 31 3 998 197 346 65 37 chr15 54203420 54203528 -49291446 + MIR SINE MIR 56 166 -96 3 998 24 32 0 0 chr15 54204200 54204231 -49290743 + AT_rich Low_complexity Low_complexity 1 31 0 3 998 302 98 0 0 chr15 54204509 54204550 -49290424 - L1_Mus3 LINE L1 -149 6489 6449 3 998 196 310 35 0 chr15 54204646 54204704 -49290270 + MIRb SINE MIR 35 94 -174 3 998 797 266 87 0 chr15 54204750 54204968 -49290006 - Lx6 LINE L1 -13 7447 7211 3 998 25 31 0 0 chr15 54206165 54206197 -49288777 + AT_rich Low_complexity Low_complexity 1 32 0 3 998 180 0 0 0 chr15 54206396 54206416 -49288558 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 3 998 232 296 215 0 chr15 54206779 54206889 -49288085 + MIRm SINE MIR 40 168 -100 3 998 5794 74 4 19 chr15 54207189 54207997 -49286977 - L1Md_F2 LINE L1 -1 6581 5786 3 998 324 0 0 0 chr15 54207997 54208033 -49286941 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 998 8738 58 1 5 chr15 54208033 54209868 -49285106 - L1Md_F3 LINE L1 -25 6559 4729 3 998 249 21 82 20 chr15 54210162 54210211 -49284763 + (TTTTG)n Simple_repeat Simple_repeat 2 53 0 3 998 181 296 83 36 chr15 54210729 54210813 -49284161 + MIRm SINE MIR 173 260 -16 3 998 332 267 210 6 chr15 54211041 54211203 -49283771 - MLT1E2 LTR MaLR -338 289 95 3 998 496 235 3 24 chr15 54211300 54211416 -49283558 + B1_Mus2 SINE Alu 1 109 -11 3 998 261 373 69 28 chr15 54211819 54212037 -49282937 + LTR81A LTR ERV1? 221 447 -903 3 998 591 154 12 6 chr15 54212182 54212352 -49282622 + (TCTA)n Simple_repeat Simple_repeat 3 173 0 3 998 602 266 94 16 chr15 54212358 54212549 -49282425 + ORR1D1 LTR MaLR 169 374 0 3 998 250 273 203 46 chr15 54213038 54213168 -49281806 + MIRb SINE MIR 55 197 -65 3 998 495 0 0 0 chr15 54213168 54213223 -49281751 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 3 998 237 271 209 49 chr15 54213223 54213268 -49281706 + MIR SINE MIR 198 256 -6 3 998 387 143 0 0 chr15 54214034 54214090 -49280884 - ORR1B2 LTR MaLR 0 367 312 3 998 1134 190 82 110 chr15 54214090 54214445 -49280529 - RMER1C Other Other 0 1342 998 3 998 1725 178 32 10 chr15 54214453 54214765 -49280209 - ORR1B2 LTR MaLR -48 319 1 3 998 285 29 0 0 chr15 54214833 54214867 -49280107 + (A)n Simple_repeat Simple_repeat 1 34 0 3 998 1495 189 3 101 chr15 54214928 54215264 -49279710 + ORR1B1 LTR MaLR 41 343 -51 3 998 243 88 0 0 chr15 54215291 54215325 -49279649 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 998 198 191 0 0 chr15 54215619 54215666 -49279308 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 998 207 0 0 0 chr15 54215738 54215761 -49279213 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 3 998 4304 111 10 30 chr15 54215773 54216461 -49278513 + Lx LINE L1 5981 6654 0 3 998 410 125 0 30 chr15 54216466 54216532 -49278442 + ORR1B1 LTR MaLR 315 378 0 3 998 23 0 0 0 chr15 54216540 54216563 -49278411 + AT_rich Low_complexity Low_complexity 1 23 0 3 998 309 250 29 20 chr15 54217179 54217281 -49277693 - B4A SINE B4 -2 290 188 3 998 285 372 0 0 chr15 54217243 54217356 -49277618 - PB1D7 SINE Alu -2 118 6 3 998 220 302 11 75 chr15 54217352 54217445 -49277529 - B2_Mm2 SINE B2 -108 87 1 3 998 23 0 0 0 chr15 54217481 54217504 -49277470 + AT_rich Low_complexity Low_complexity 1 23 0 3 998 23 33 0 0 chr15 54220150 54220180 -49274794 + AT_rich Low_complexity Low_complexity 1 30 0 3 998 324 309 75 109 chr15 54220431 54220725 -49274249 + ORR1E LTR MaLR 64 347 -12 3 998 3457 79 0 26 chr15 54220802 54221326 -49273648 + L1_Mus1 LINE L1 6110 6567 0 3 998 726 128 0 0 chr15 54221669 54221786 -49273188 + (TAGA)n Simple_repeat Simple_repeat 4 120 0 3 998 472 332 39 70 chr15 54222033 54222289 -49272685 + RLTR26 LTR ERVK 169 416 -226 3 998 387 0 0 0 chr15 54222688 54222731 -49272243 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 3 998 1124 178 17 56 chr15 54223826 54224058 -49270916 + URR1B DNA MER1_type 2 224 -1 3 998 219 284 112 20 chr15 54224295 54224489 -49270485 + MIR SINE MIR 29 242 -26 3 998 237 246 118 39 chr15 54224882 54225009 -49269965 + B1F SINE Alu 1 137 -12 3 998 282 278 153 0 chr15 54225042 54225114 -49269860 + ID4_ SINE ID 1 83 0 3 998 21 0 0 0 chr15 54226054 54226075 -49268899 + AT_rich Low_complexity Low_complexity 1 21 0 3 998 975 310 120 37 chr15 54226214 54226632 -49268342 + Lx7 LINE L1 6506 6931 -765 3 998 216 0 0 0 chr15 54226632 54226656 -49268318 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 998 975 310 121 36 chr15 54226656 54226839 -49268135 + Lx7 LINE L1 6932 7169 -304 3 998 804 21 0 0 chr15 54226839 54226933 -49268041 + (CCCCAG)n Simple_repeat Simple_repeat 5 98 0 3 998 527 314 146 17 chr15 54226933 54227123 -49267851 + Lx7 LINE L1 7170 7386 -87 3 998 2051 28 8 4 chr15 54227128 54227379 -49267595 + L1Md_F3 LINE L1 6330 6581 -3 3 998 26 0 0 0 chr15 54227379 54227405 -49267569 + AT_rich Low_complexity Low_complexity 1 26 0 3 998 262 0 26 26 chr15 54227461 54227500 -49267474 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 998 387 0 0 0 chr15 54228124 54228167 -49266807 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 998 25 75 0 0 chr15 54228586 54228639 -49266335 + AT_rich Low_complexity Low_complexity 1 53 0 3 998 37 0 0 0 chr15 54228995 54229032 -49265942 + AT_rich Low_complexity Low_complexity 1 37 0 3 998 304 326 40 31 chr15 54229299 54229527 -49265447 - L1M4 LINE L1 -402 5776 5547 3 998 323 254 57 50 chr15 54229788 54229929 -49265045 - L1M4 LINE L1 -869 5277 5136 3 998 716 270 24 19 chr15 54229929 54230137 -49264837 - B3 SINE B2 -6 210 2 3 998 658 339 46 71 chr15 54230374 54230742 -49264232 - ORR1E LTR MaLR 0 359 1 3 998 504 306 67 62 chr15 54232004 54232213 -49262761 - MTE2a LTR MaLR -3 376 167 3 998 8172 46 1 2 chr15 54232213 54233470 -49261504 - L1Md_F2 LINE L1 -6 6576 5321 3 998 494 286 51 38 chr15 54233470 54233690 -49261284 - MTE2a LTR MaLR -208 211 3 3 998 460 300 11 12 chr15 54233941 54234079 -49260895 + PB1D10 SINE Alu 1 141 -8 3 998 295 345 37 63 chr15 54234079 54234130 -49260844 + B4 SINE B4 86 269 -23 3 998 264 310 34 34 chr15 54234096 54234184 -49260790 + ID4_ SINE ID 5 92 -60 3 998 227 250 0 0 chr15 54234191 54234239 -49260735 + L2a LINE L2 3378 3425 -1 3 998 180 200 0 0 chr15 54234364 54234404 -49260570 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 3 998 288 0 0 0 chr15 54234406 54234438 -49260536 + (T)n Simple_repeat Simple_repeat 1 32 0 3 998 939 76 114 0 chr15 54234438 54234570 -49260404 - B1_Mus1 SINE Alu 0 148 2 3 998 471 334 108 26 chr15 54234765 54235432 -49259542 + HAL1 LINE L1 1491 2278 -229 3 998 1874 99 10 67 chr15 54235811 54236125 -49258849 + L1_Mus2 LINE L1 6271 6566 0 3 998 726 314 131 36 chr15 54236527 54236978 -49257996 - MLT1D LTR MaLR -10 495 3 3 998 2922 146 22 6 chr15 54238360 54238870 -49256104 - L1_Mur1 LINE L1 -816 5070 4553 3 998 30 0 0 0 chr15 54239017 54239047 -49255927 + AT_rich Low_complexity Low_complexity 1 30 0 3 998 455 0 18 0 chr15 54240234 54240289 -49254685 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 998 225 324 0 29 chr15 54240292 54240362 -49254612 + MIRm SINE MIR 84 151 -125 3 998 233 269 14 29 chr15 54240597 54240666 -49254308 + MLT1C LTR MaLR 400 467 0 3 998 778 275 51 51 chr15 54240847 54241123 -49253851 + B4A SINE B4 1 276 -16 3 998 414 0 0 0 chr15 54241127 54241173 -49253801 + (GA)n Simple_repeat Simple_repeat 2 47 0 3 998 291 175 0 0 chr15 54241178 54241235 -49253739 + GA-rich Low_complexity Low_complexity 3 59 0 3 998 227 306 33 8 chr15 54241650 54241772 -49253202 - L1M5 LINE L1 -435 5689 5565 3 998 285 361 44 11 chr15 54246137 54246338 -49248636 - MIRb SINE MIR -44 224 4 3 998 211 229 16 0 chr15 54247493 54247554 -49247420 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 3 998 331 180 45 0 chr15 54247581 54247692 -49247282 + (TA)n Simple_repeat Simple_repeat 1 116 0 3 998 802 186 9 9 chr15 54248276 54248499 -49246475 + CT-rich Low_complexity Low_complexity 1 223 0 3 998 342 15 0 82 chr15 54248513 54248586 -49246388 + (TTTCC)n Simple_repeat Simple_repeat 5 71 0 3 998 2618 174 23 10 chr15 54249996 54250545 -49244429 - Lx7 LINE L1 -1764 5932 5375 3 998 2664 229 45 165 chr15 54250526 54250888 -49244086 - L1_Mur3 LINE L1 -1277 4609 4276 3 998 5343 58 1 12 chr15 54250888 54251575 -49243399 - L1Md_F2 LINE L1 -1 6581 5902 3 998 3777 167 63 55 chr15 54251575 54252320 -49242654 - L1_Mur3 LINE L1 -1611 4275 3649 3 998 513 0 0 0 chr15 54252320 54252377 -49242597 + (TC)n Simple_repeat Simple_repeat 2 58 0 3 998 3777 151 68 26 chr15 54252377 54252552 -49242422 - L1_Mur3 LINE L1 -2232 3648 3472 3 998 231 36 0 0 chr15 54252560 54252588 -49242386 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 3 998 4144 171 29 108 chr15 54252596 54253380 -49241594 - L1_Mur3 LINE L1 -3614 2266 1535 3 998 1143 55 7 0 chr15 54253380 54253525 -49241449 + B1_Mm SINE Alu 2 147 0 3 998 4144 184 69 77 chr15 54253525 54254181 -49240793 - L1_Mur3 LINE L1 -4346 1534 952 3 998 576 0 0 0 chr15 54254181 54254245 -49240729 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 998 3844 201 119 38 chr15 54254245 54254785 -49240189 - L1_Mur3 LINE L1 -6777 951 299 3 998 630 192 8 15 chr15 54254787 54254919 -49240055 + Lx7 LINE L1 7561 7691 -5 3 998 1942 92 11 3 chr15 54255757 54256041 -49238933 - L1_Mus3 LINE L1 -3 6635 6350 3 998 5365 150 3 35 chr15 54256061 54256282 -49238692 - Lx7 LINE L1 -563 5314 5100 3 998 1952 42 0 0 chr15 54256282 54256518 -49238456 - L1Md_T LINE L1 0 6582 6347 3 998 5365 150 3 35 chr15 54256518 54257281 -49237693 - Lx7 LINE L1 -778 5099 4361 3 998 2567 86 37 3 chr15 54257279 54257738 -49237236 - Lx7 LINE L1 -2661 3225 2696 3 998 198 0 0 0 chr15 54257930 54257952 -49237022 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 998 436 305 45 26 chr15 54258168 54258323 -49236651 - RSINE1 SINE B4 -4 161 4 3 998 284 357 44 18 chr15 54258331 54258445 -49236529 - B1F SINE Alu -15 134 18 3 998 231 114 0 0 chr15 54258657 54258692 -49236282 + (CATA)n Simple_repeat Simple_repeat 2 36 0 3 998 365 383 0 0 chr15 54259625 54259745 -49235229 - L3 LINE CR1 -991 3498 3379 3 998 22 0 0 0 chr15 54260732 54260754 -49234220 + AT_rich Low_complexity Low_complexity 1 22 0 3 998 46 68 0 0 chr15 54260866 54260954 -49234020 + AT_rich Low_complexity Low_complexity 1 88 0 3 998 418 253 0 0 chr15 54261146 54261233 -49233741 - RCHARR1 DNA MER1_type -203 771 685 4 998 265 247 78 0 chr15 54261351 54261428 -49233546 - RCHARR1 DNA MER1_type -292 682 600 4 998 236 343 45 45 chr15 54262018 54262128 -49232846 - L3 LINE CR1 -1180 3309 3200 3 998 200 333 49 0 chr15 54262625 54262706 -49232268 - MIRb SINE MIR -76 192 108 4 998 22 70 0 0 chr15 54263420 54263463 -49231511 + AT_rich Low_complexity Low_complexity 1 43 0 4 999 402 322 87 50 chr15 54263973 54264192 -49230782 + MIR SINE MIR 21 247 -15 4 999 303 93 0 0 chr15 54264518 54264561 -49230413 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 999 211 287 31 85 chr15 54264567 54264684 -49230290 - MIRc SINE MIR -108 160 47 4 999 245 279 92 33 chr15 54265387 54265539 -49229435 - MIRc SINE MIR -28 240 80 4 999 229 375 44 29 chr15 54265577 54265718 -49229256 - MIRb SINE MIR -99 177 35 4 999 304 257 193 40 chr15 54266246 54266396 -49228578 - Lx8 LINE L1 -233 7240 7068 4 999 274 290 0 0 chr15 54266660 54266729 -49228245 + CT-rich Low_complexity Low_complexity 1 69 0 4 999 936 216 60 43 chr15 54266974 54267206 -49227768 + RMER1C Other Other 1092 1327 -15 4 999 510 273 28 14 chr15 54267804 54267945 -49227029 - B1_Mur3 SINE Alu -2 147 5 4 999 226 355 35 24 chr15 54267999 54268030 -49226944 + ID_B1 SINE B4 53 224 0 4 999 347 288 72 0 chr15 54268030 54268169 -49226805 + B1F SINE Alu 1 149 0 4 999 2910 227 74 11 chr15 54268569 54268948 -49226026 - Lx7 LINE L1 -376 7320 6906 4 999 531 0 0 0 chr15 54268948 54269007 -49225967 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 999 2910 232 211 10 chr15 54269007 54269375 -49225599 - Lx7 LINE L1 -791 6905 6477 4 999 233 348 91 0 chr15 54269382 54269482 -49225492 + PB1D10 SINE Alu 1 111 -9 4 999 1233 276 48 13 chr15 54269671 54270133 -49224841 - L1M2 LINE L1 -958 5185 4708 4 999 1482 113 80 0 chr15 54270140 54270379 -49224595 - Lx LINE L1 0 6654 6397 4 999 430 17 34 0 chr15 54270421 54270480 -49224494 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 4 999 405 0 0 0 chr15 54271364 54271409 -49223565 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 999 776 359 50 4 chr15 54272348 54272625 -49222349 + Arthur1 DNA Tip100 155 444 -3503 4 999 411 305 124 28 chr15 54273234 54273700 -49221274 + L1M5 LINE L1 3960 4470 -1676 4 999 1903 244 130 14 chr15 54273837 54274399 -49220575 - RCHARR1 DNA MER1_type -341 633 7 4 999 194 175 119 34 chr15 54274525 54274584 -49220390 + L2c LINE L2 3074 3137 -250 4 999 1429 202 26 168 chr15 54274652 54275111 -49219863 - ORR1B1 LTR MaLR 0 394 1 4 999 544 311 78 49 chr15 54275166 54275450 -49219524 + B4A SINE B4 1 292 0 4 999 241 274 14 14 chr15 54275454 54275528 -49219446 + (CATA)n Simple_repeat Simple_repeat 1 74 0 4 999 477 90 0 0 chr15 54275531 54275598 -49219376 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 999 35807 24 0 1 chr15 54275879 54282329 -49212645 - L1Md_T LINE L1 0 6585 66 4 999 242 317 19 47 chr15 54283461 54283567 -49211407 - Tigger7 DNA MER2_type -12 2479 2377 4 999 5821 157 55 6 chr15 54283582 54284466 -49210508 - Lx3C LINE L1 -8 6968 6046 4 999 1490 17 0 6 chr15 54284466 54284644 -49210330 + (TCTCCC)n Simple_repeat Simple_repeat 4 180 0 4 999 5821 157 55 6 chr15 54284644 54284819 -49210155 - Lx3C LINE L1 -931 6045 5858 4 999 6233 114 8 30 chr15 54284836 54285923 -49209051 - L1_Mur1 LINE L1 -893 4993 3931 4 999 562 322 148 4 chr15 54285960 54286203 -49208771 - Tigger7 DNA MER2_type -2213 278 1 4 999 994 271 94 5 chr15 54286470 54286874 -49208100 - L1MA6 LINE L1 0 6300 5860 4 999 388 328 140 6 chr15 54286924 54287102 -49207872 + MIR SINE MIR 27 228 -34 4 999 276 30 0 0 chr15 54287250 54287283 -49207691 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 999 213 296 47 102 chr15 54288257 54288385 -49206589 + L2c LINE L2 3258 3378 -9 4 999 190 81 26 26 chr15 54288864 54288902 -49206072 + (TTTTTG)n Simple_repeat Simple_repeat 4 41 0 4 999 201 132 0 0 chr15 54289034 54289072 -49205902 + (CAAAAA)n Simple_repeat Simple_repeat 4 41 0 4 999 27 0 0 0 chr15 54290122 54290149 -49204825 + AT_rich Low_complexity Low_complexity 1 27 0 4 999 279 0 0 0 chr15 54290164 54290195 -49204779 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 999 708 135 314 0 chr15 54290910 54291066 -49203908 - B3 SINE B2 -7 209 5 4 999 352 266 169 77 chr15 54291603 54291786 -49203188 - RLTR24 LTR ERV1 0 529 330 4 999 294 143 0 0 chr15 54291786 54291849 -49203125 + (T)n Simple_repeat Simple_repeat 1 63 0 4 999 327 297 16 63 chr15 54291911 54292037 -49202937 - RLTR24 LTR ERV1 -409 120 1 4 999 621 291 0 75 chr15 54292652 54292864 -49202110 + B3A SINE B2 3 198 0 4 999 221 333 104 42 chr15 54293219 54293460 -49201514 - L2c LINE L2 -60 3327 3072 4 999 377 293 10 0 chr15 54295969 54296068 -49198906 - PB1D10 SINE Alu -17 100 1 4 999 24 67 0 0 chr15 54296704 54296749 -49198225 + AT_rich Low_complexity Low_complexity 1 45 0 4 999 534 301 75 40 chr15 54296834 54296946 -49198028 + B3A SINE B2 5 129 -69 4 999 2524 191 103 69 chr15 54296946 54297537 -49197437 + RMER19C LTR ERVK 1 611 0 4 999 534 307 78 45 chr15 54297537 54297630 -49197344 + B3A SINE B2 128 216 0 4 999 297 0 0 0 chr15 54299144 54299177 -49195797 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 999 382 341 99 33 chr15 54299214 54299517 -49195457 + Tigger11a DNA MER2_type 198 520 -215 4 999 394 307 24 46 chr15 54299731 54299926 -49195048 - MTEa LTR MaLR -7 372 170 4 999 277 310 62 0 chr15 54299955 54300068 -49194906 + RMER15 LTR ERVL 385 504 -71 4 999 180 135 0 0 chr15 54301349 54301386 -49193588 + (TCTG)n Simple_repeat Simple_repeat 3 39 0 4 999 526 286 25 19 chr15 54301398 54301555 -49193419 - B4 SINE B4 -80 212 55 4 999 993 349 60 22 chr15 54302492 54303075 -49191899 - Lx8 LINE L1 -63 7410 6806 4 999 1142 318 110 36 chr15 54303412 54304056 -49190918 - MER44C DNA MER2_type 0 733 82 4 999 2131 191 161 43 chr15 54304058 54304593 -49190381 + RMER19B LTR ERVK 305 902 0 4 999 226 347 42 0 chr15 54304593 54304684 -49190290 - MER44C DNA MER2_type -638 95 1 4 999 297 252 50 93 chr15 54304705 54304845 -49190129 - MIRb SINE MIR -43 225 92 4 999 518 213 90 6 chr15 54305643 54305799 -49189175 + Lx3C LINE L1 6806 6974 -2 4 999 296 243 26 39 chr15 54306120 54306197 -49188777 - ID4 SINE ID -2 81 6 4 999 2614 63 25 0 chr15 54306221 54306584 -49188390 + L1_Mus3 LINE L1 5762 6133 -505 4 999 892 181 0 0 chr15 54306593 54306748 -49188226 - Lx5 LINE L1 -330 6720 6566 4 999 2165 118 0 9 chr15 54306745 54307113 -49187861 + L1_Mus3 LINE L1 6150 6506 -148 4 999 306 0 0 0 chr15 54307481 54307515 -49187459 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 4 999 354 332 10 115 chr15 54307660 54307712 -49187262 - MLT1A0 LTR MaLR -2 406 366 4 999 804 197 0 13 chr15 54307712 54307861 -49187113 + B1_Mus2 SINE Alu 1 147 0 4 999 360 332 10 115 chr15 54307861 54308016 -49186958 - MLT1A0 LTR MaLR -43 365 199 4 999 279 371 48 48 chr15 54308411 54308578 -49186396 - LTR33 LTR ERVL -343 172 6 4 999 3981 134 229 45 chr15 54309085 54309953 -49185021 - RLTR25B LTR ERVK 0 1028 1 4 999 297 335 31 63 chr15 54310147 54310338 -49184636 - RMER4A LTR ERVK -274 192 8 4 999 312 83 0 0 chr15 54310478 54310526 -49184448 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 4 999 751 316 77 33 chr15 54311625 54311962 -49183012 - MLT1J-int LTR MaLR -475 912 561 4 999 180 0 0 0 chr15 54312728 54312748 -49182226 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 999 542 248 72 7 chr15 54312880 54313018 -49181956 + B1_Mur3 SINE Alu 2 148 -1 4 999 250 338 143 0 chr15 54313178 54313332 -49181642 + MIR SINE MIR 85 260 -2 4 999 417 356 32 102 chr15 54313349 54313662 -49181312 + B4 SINE B4 1 291 -1 4 999 316 247 173 60 chr15 54314823 54315008 -49179966 - Tigger13a DNA MER2_type -428 343 138 4 999 24 53 0 0 chr15 54316846 54316884 -49178090 + AT_rich Low_complexity Low_complexity 1 38 0 4 999 594 0 0 0 chr15 54317482 54317548 -49177426 + (GA)n Simple_repeat Simple_repeat 1 66 0 4 999 246 277 125 21 chr15 54317612 54317708 -49177266 - ORR1E LTR MaLR -251 108 3 4 999 621 182 104 22 chr15 54317923 54318058 -49176916 + B1_Mus2 SINE Alu 1 146 -1 4 999 1922 173 28 75 chr15 54318584 54319106 -49175868 + Lx6 LINE L1 3398 3895 -1985 4 999 306 0 0 0 chr15 54319106 54319140 -49175834 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 999 1922 173 28 75 chr15 54319140 54319180 -49175794 + Lx6 LINE L1 3896 3934 -1946 4 999 1135 23 8 0 chr15 54319704 54319836 -49175138 + B1_Mm SINE Alu 2 134 -13 4 999 1547 5 9 0 chr15 54319851 54320069 -49174905 + (GGAGAA)n Simple_repeat Simple_repeat 1 219 0 4 999 684 0 0 0 chr15 54320069 54320145 -49174829 + (GAA)n Simple_repeat Simple_repeat 1 76 0 4 999 9349 203 21 18 chr15 54320370 54323385 -49171589 + Lx6 LINE L1 3917 6972 -488 4 999 1715 171 13 3 chr15 54323385 54323684 -49171290 + Lx2 LINE L1 6696 6997 0 4 999 7546 229 39 32 chr15 54323684 54324188 -49170786 + Lx6 LINE L1 6973 7458 -2 4 999 348 304 99 26 chr15 54324281 54324433 -49170541 + Tigger5 DNA MER2_type 53 215 -2191 4 999 241 342 40 0 chr15 54324454 54324530 -49170444 + ID4_ SINE ID 2 80 -3 4 999 610 298 0 13 chr15 54324587 54324740 -49170234 + RSINE1 SINE B4 7 157 -8 4 999 227 193 16 81 chr15 54324950 54325012 -49169962 + RMER12B LTR ERVK 465 522 -882 4 999 252 323 46 0 chr15 54324960 54325025 -49169949 - ID4_ SINE ID -14 69 2 4 999 1625 249 123 16 chr15 54325037 54325303 -49169671 - Lx8 LINE L1 -2 7471 7151 4 999 405 0 0 0 chr15 54325303 54325348 -49169626 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 999 1625 249 123 16 chr15 54325348 54325644 -49169330 - Lx8 LINE L1 -323 7150 6849 4 999 258 136 0 0 chr15 54325662 54325706 -49169268 + (GGA)n Simple_repeat Simple_repeat 3 46 0 4 999 243 287 0 69 chr15 54325721 54325822 -49169152 - Lx8 LINE L1 -620 6853 6760 4 999 325 290 36 36 chr15 54325849 54325960 -49169014 - B1F1 SINE Alu -38 111 1 4 999 728 171 17 16 chr15 54326875 54327124 -49167850 + GA-rich Low_complexity Low_complexity 1 249 0 4 999 708 85 92 0 chr15 54327124 54327265 -49167709 + Lx3_Mus LINE L1 6837 6990 -19 4 999 203 61 30 0 chr15 54327265 54327298 -49167676 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 4 999 301 214 15 37 chr15 54327298 54327353 -49167621 + polypurine Low_complexity Low_complexity 81 133 0 5 999 285 51 0 0 chr15 54327574 54327613 -49167361 + (A)n Simple_repeat Simple_repeat 1 39 0 5 999 304 338 78 33 chr15 54327857 54328010 -49166964 + RSINE1 SINE B4 4 163 -2 5 999 182 346 12 49 chr15 54328161 54328243 -49166731 + L2b LINE L2 3159 3237 -138 5 999 222 211 210 9 chr15 54328219 54328303 -49166671 - MIRc SINE MIR -101 167 75 5 999 818 292 15 0 chr15 54328884 54329086 -49165888 - B3 SINE B2 -10 206 2 5 999 450 319 147 33 chr15 54329175 54329535 -49165439 - L1M5 LINE L1 -1713 4433 4033 5 999 396 0 0 0 chr15 54329592 54329636 -49165338 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 999 622 296 94 112 chr15 54329647 54329683 -49165291 - L1M5 LINE L1 -2498 3648 3611 5 999 779 235 34 34 chr15 54329683 54329890 -49165084 - B3 SINE B2 -7 209 3 5 999 622 296 94 112 chr15 54329890 54330421 -49164553 - L1M5 LINE L1 -2536 3610 3119 5 999 239 0 0 31 chr15 54330421 54330453 -49164521 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5 999 622 296 94 112 chr15 54330453 54330743 -49164231 - L1M5 LINE L1 -3028 3118 2806 5 999 284 283 22 0 chr15 54330782 54330874 -49164100 - L1MD LINE L1 -3355 2791 2698 5 999 990 299 56 16 chr15 54330958 54331261 -49163713 + MTE2b LTR MaLR 8 322 -57 5 999 434 365 106 0 chr15 54331430 54331723 -49163251 - L1M5 LINE L1 -3535 2611 2288 5 999 1779 216 35 14 chr15 54331909 54332078 -49162896 + ORR1D1 LTR MaLR 1 180 -194 5 999 450 0 0 0 chr15 54332078 54332128 -49162846 + (TC)n Simple_repeat Simple_repeat 2 51 0 5 999 387 60 0 0 chr15 54332128 54332177 -49162797 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 999 201 94 0 0 chr15 54332178 54332210 -49162764 + (TCTG)n Simple_repeat Simple_repeat 2 33 0 5 999 1779 216 35 14 chr15 54332210 54332403 -49162571 + ORR1D1 LTR MaLR 181 373 -1 5 999 662 355 46 29 chr15 54332521 54332802 -49162172 - B4A SINE B4 -2 290 5 5 999 447 345 96 25 chr15 54333625 54334068 -49160906 + MLT1D LTR MaLR 3 502 -3 5 999 242 316 38 50 chr15 54335477 54335557 -49159417 - PB1D7 SINE Alu -7 113 35 5 999 310 308 21 63 chr15 54335599 54335741 -49159233 - B3A SINE B2 0 198 63 5 999 536 278 0 38 chr15 54335761 54335892 -49159082 + MT2B LTR ERVL 1 126 -407 5 999 472 188 74 48 chr15 54335951 54336059 -49158915 + MT2B LTR ERVL 135 228 -305 5 999 1579 79 0 34 chr15 54336078 54336485 -49158489 + L1Md_F2 LINE L1 6332 6582 0 5 999 603 256 72 67 chr15 54336485 54336635 -49158339 + MT2B LTR ERVL 406 544 -57 5 999 402 115 0 0 chr15 54336635 54336696 -49158278 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 999 603 256 72 67 chr15 54336696 54336738 -49158236 + MT2B LTR ERVL 545 598 -3 5 999 423 256 0 0 chr15 54336798 54336888 -49158086 - PB1D10 SINE Alu -17 100 11 5 999 243 381 80 12 chr15 54336888 54336959 -49158015 - B4 SINE B4 -100 191 20 5 999 22 0 0 0 chr15 54337491 54337513 -49157461 + AT_rich Low_complexity Low_complexity 1 22 0 5 999 583 123 9 9 chr15 54338088 54338134 -49156840 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 999 1045 88 0 12 chr15 54338134 54338295 -49156679 + (TTC)n Simple_repeat Simple_repeat 3 161 0 5 999 583 123 9 9 chr15 54338295 54338355 -49156619 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 999 402 184 87 16 chr15 54338471 54338598 -49156376 - Lx5 LINE L1 0 7050 6915 5 999 254 350 0 28 chr15 54338606 54338712 -49156262 + L2a LINE L2 2834 2936 -483 5 999 728 215 31 10 chr15 54338905 54339098 -49155876 - RCHARR1 DNA MER1_type -4 970 774 5 999 384 265 0 58 chr15 54339122 54339226 -49155748 - PB1D10 SINE Alu -5 112 15 5 999 526 285 41 8 chr15 54339133 54339282 -49155692 - ID_B1 SINE B4 -33 191 38 5 999 210 379 76 12 chr15 54339369 54339540 -49155434 + L2a LINE L2 3234 3415 -11 5 999 212 347 141 0 chr15 54339609 54339730 -49155244 - MIR SINE MIR -97 165 28 5 999 653 50 0 10 chr15 54340087 54340187 -49154787 + L1Md_F3 LINE L1 6471 6569 -15 5 999 704 269 83 0 chr15 54340241 54340434 -49154540 + ID_B1 SINE B4 4 212 -12 5 999 602 13 13 0 chr15 54340434 54340509 -49154465 + (TAGA)n Simple_repeat Simple_repeat 2 77 0 5 999 704 292 55 44 chr15 54341732 54342060 -49152914 + MLT1A0 LTR MaLR 1 402 -6 5 999 416 111 14 0 chr15 54342288 54342360 -49152614 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 999 302 82 41 0 chr15 54342787 54342836 -49152138 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 5 999 326 301 0 0 chr15 54343047 54343120 -49151854 + RSINE1 SINE B4 74 146 -19 5 999 1391 45 6 0 chr15 54343125 54343304 -49151670 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 5 999 952 185 17 43 chr15 54343671 54343903 -49151071 - URR1A DNA MER1_type 0 226 1 5 999 1066 88 0 0 chr15 54346616 54346752 -49148222 + B1_Mus1 SINE Alu 2 137 -11 5 999 266 0 0 29 chr15 54346752 54346787 -49148187 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 999 239 164 0 47 chr15 54347421 54347485 -49147489 + T-rich Low_complexity Low_complexity 1 61 0 5 999 378 301 10 0 chr15 54347485 54347588 -49147386 - PB1D9 SINE Alu -1 119 16 5 999 7528 58 1 2 chr15 54348073 54349058 -49145916 - L1Md_F2 LINE L1 -12 6570 5587 5 999 1145 224 7 83 chr15 54350882 54351184 -49143790 + RMER19C LTR ERVK 1 279 -332 5 999 240 196 0 0 chr15 54351186 54351242 -49143732 + (CTTTG)n Simple_repeat Simple_repeat 1 56 0 5 999 1395 244 68 92 chr15 54351242 54351736 -49143238 + RMER19C LTR ERVK 218 737 0 5 999 515 256 37 15 chr15 54352286 54352421 -49142553 - ORR1D1 LTR MaLR 0 374 237 5 999 290 182 167 0 chr15 54352421 54352487 -49142487 - ORR1D1 LTR MaLR -297 77 1 5 999 737 238 7 0 chr15 54352951 54353098 -49141876 + B1_Mur2 SINE Alu 1 148 -1 5 999 700 314 24 5 chr15 54354445 54354650 -49140324 - B3 SINE B2 -2 214 6 5 999 197 290 16 16 chr15 54355079 54355142 -49139832 + MIR SINE MIR 109 171 -91 5 999 1046 268 25 13 chr15 54355817 54356055 -49138919 + B4A SINE B4 2 242 -50 5 999 353 117 17 0 chr15 54356074 54356134 -49138840 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 999 323 351 53 11 chr15 54356566 54356753 -49138221 - LTR16E1 LTR ERVL -1 537 343 5 999 395 262 12 0 chr15 54356892 54356976 -49137998 + B1_Mur2 SINE Alu 45 129 -20 5 999 1734 188 63 6 chr15 54356983 54357330 -49137644 - ORR1B2 LTR MaLR 0 367 1 5 999 15901 28 1 0 chr15 54357716 54360362 -49134612 - L1Md_T LINE L1 0 6582 3935 5 999 701 93 0 0 chr15 54360362 54360469 -49134505 + L1Md_A LINE L1 449 555 -6169 5 999 2156 187 58 0 chr15 54361618 54362014 -49132960 - MTC LTR MaLR -2 419 1 5 999 254 245 117 0 chr15 54362666 54362760 -49132214 + B1F2 SINE Alu 40 144 -5 5 999 183 80 0 0 chr15 54362767 54362792 -49132182 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 5 999 387 165 28 0 chr15 54363581 54363690 -49131284 + CT-rich Low_complexity Low_complexity 2 113 0 5 999 258 105 0 0 chr15 54366533 54366571 -49128403 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 5 999 195 42 0 0 chr15 54367082 54367106 -49127868 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 999 557 250 52 0 chr15 54367108 54367244 -49127730 - B1_Mur3 SINE Alu -6 143 1 5 999 439 140 26 0 chr15 54367446 54367560 -49127414 + (TCTG)n Simple_repeat Simple_repeat 4 120 0 5 999 828 129 0 15 chr15 54367674 54367808 -49127166 + B1_Mus2 SINE Alu 5 136 -11 5 999 350 355 75 20 chr15 54367922 54368123 -49126851 - MIR SINE MIR -14 248 37 5 999 908 230 33 47 chr15 54368324 54368538 -49126436 - B3 SINE B2 -5 211 1 5 999 274 333 129 8 chr15 54368593 54368717 -49126257 + B4A SINE B4 8 146 -146 5 999 2338 148 45 8 chr15 54369590 54369992 -49124982 - MTC LTR MaLR 0 421 5 5 999 658 284 62 151 chr15 54370131 54370516 -49124458 + ORR1D1 LTR MaLR 16 366 -8 5 999 736 107 16 0 chr15 54371225 54371346 -49123628 + (GGAA)n Simple_repeat Simple_repeat 2 124 0 5 999 332 350 67 34 chr15 54371400 54371673 -49123301 + LTR75 LTR ERVL 20 340 -222 5 999 300 337 66 106 chr15 54372222 54372524 -49122450 + B4 SINE B4 3 292 0 5 999 180 0 0 0 chr15 54372544 54372564 -49122410 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 999 638 213 136 16 chr15 54372583 54372774 -49122200 + B3 SINE B2 2 215 -1 5 999 331 294 130 40 chr15 54373157 54373334 -49121640 + MER53 DNA hAT 1 193 0 5 999 548 263 185 39 chr15 54374766 54374944 -49120030 + B3 SINE B2 1 204 -12 5 999 690 317 65 10 chr15 54375075 54375384 -49119590 + L1MC1 LINE L1 5787 6112 -221 5 999 278 247 0 36 chr15 54375438 54375522 -49119452 + L1MC1 LINE L1 6236 6316 -17 5 999 5171 87 0 16 chr15 54375524 54376227 -49118747 - L1_Mus2 LINE L1 -4 6562 5871 5 999 4361 76 1 0 chr15 54376227 54376927 -49118047 + L1_Mus2 LINE L1 5244 5944 -622 5 999 30176 76 6 2 chr15 54376950 54382116 -49112858 + L1Md_F2 LINE L1 400 5585 -298 5 999 8347 37 2 0 chr15 54382117 54383105 -49111869 + L1Md_F2 LINE L1 5587 6576 -6 5 999 422 311 0 0 chr15 54384081 54384184 -49110790 + B1F SINE Alu 3 105 -44 5 999 237 386 74 22 chr15 54384184 54384215 -49110759 + ID_B1 SINE B4 84 224 0 5 999 373 278 51 25 chr15 54384626 54384744 -49110230 + ID_B1 SINE B4 102 222 -2 5 999 231 204 0 0 chr15 54384752 54384801 -49110173 + GA-rich Low_complexity Low_complexity 2 50 0 5 999 22 0 0 0 chr15 54385064 54385086 -49109888 + AT_rich Low_complexity Low_complexity 1 22 0 5 999 489 138 43 0 chr15 54385140 54385234 -49109740 + L1VL1 LINE L1 2 99 -6323 5 999 26130 72 2 1 chr15 54385226 54390011 -49104963 + L1Md_F2 LINE L1 800 5585 -298 5 999 8481 57 3 1 chr15 54390012 54391006 -49103968 + L1Md_F2 LINE L1 5587 6582 0 5 999 468 297 55 29 chr15 54391930 54392227 -49102747 - L1MEc LINE L1 -3521 2798 2505 5 999 305 239 68 27 chr15 54392264 54392337 -49102637 - B1_Mur4 SINE Alu -74 76 1 5 999 231 277 49 38 chr15 54392386 54392570 -49102404 - L1MEc LINE L1 -4141 2259 2074 5 999 261 0 0 0 chr15 54392844 54392873 -49102101 + (A)n Simple_repeat Simple_repeat 1 29 0 5 999 539 187 11 0 chr15 54392877 54392968 -49102006 + B1_Mur2 SINE Alu 1 92 -57 5 999 3188 179 84 20 chr15 54393006 54393649 -49101325 - RLTR17 LTR ERVK 0 692 9 5 124 5049 225 66 72 chr15 54393650 54396027 -49098947 - RMER3D-int LTR ERVK 0 2842 1 5 1000 250 183 0 118 chr15 54396107 54396175 -49098799 + B4A SINE B4 233 292 0 5 1000 396 39 0 0 chr15 54396175 54396218 -49098756 + (GA)n Simple_repeat Simple_repeat 1 43 0 6 1000 693 36 0 0 chr15 54396218 54396302 -49098672 + (GAA)n Simple_repeat Simple_repeat 3 86 0 6 1000 396 39 0 0 chr15 54396302 54396310 -49098664 + (GA)n Simple_repeat Simple_repeat 2 9 0 6 1000 548 287 125 26 chr15 54396520 54396936 -49098038 - L1MEc LINE L1 -4709 1706 1215 5 1000 380 273 113 39 chr15 54396965 54397327 -49097647 - L1MEc LINE L1 -5244 1156 768 5 1000 683 104 173 60 chr15 54397365 54397498 -49097476 - B1_Mur4 SINE Alu -1 149 2 6 1000 310 288 61 35 chr15 54397529 54397644 -49097330 + PB1D9 SINE Alu 2 119 -1 6 1000 312 304 105 43 chr15 54397754 54398105 -49096869 - L1MEc LINE L1 -5937 463 91 5 1000 262 336 108 9 chr15 54400047 54400158 -49094816 + PB1 SINE Alu 1 122 -5 6 1000 242 254 16 33 chr15 54400180 54400241 -49094733 + ID4_ SINE ID 14 73 -10 6 1000 949 144 0 27 chr15 54400297 54400482 -49094492 + GA-rich Low_complexity Low_complexity 1 180 0 6 1000 2391 152 144 9 chr15 54400514 54400978 -49093996 - RLTR11A2 LTR ERVK 0 527 1 6 1000 320 341 56 0 chr15 54401974 54402100 -49092874 - B1F SINE Alu -14 135 3 6 1000 258 113 13 66 chr15 54402962 54403038 -49091936 + (CGG)n Simple_repeat Simple_repeat 1 72 0 6 1000 402 74 0 0 chr15 54404832 54404886 -49090088 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1000 508 233 98 25 chr15 54405043 54405206 -49089768 + MER5B DNA MER1_type 4 178 0 6 1000 351 0 0 0 chr15 54405444 54405483 -49089491 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1000 386 235 16 60 chr15 54405518 54405618 -49089356 - B4 SINE B4 -2 290 92 6 1000 491 274 16 8 chr15 54405672 54405797 -49089177 - RSINE1 SINE B4 -36 129 4 6 1000 314 309 10 20 chr15 54405905 54406004 -49088970 - B4 SINE B4 -193 99 2 6 1000 207 100 0 0 chr15 54406009 54406039 -49088935 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1000 3378 144 47 27 chr15 54406992 54407543 -49087431 - Lx2B LINE L1 -4 6996 6435 6 1000 1455 123 4 30 chr15 54407549 54407783 -49087191 + Lx2B LINE L1 6239 6466 -534 6 1000 287 371 79 55 chr15 54407822 54408076 -49086898 + B4 SINE B4 2 261 -31 6 1000 216 0 0 0 chr15 54408088 54408112 -49086862 + (CATGC)n Simple_repeat Simple_repeat 3 26 0 6 1000 234 0 0 0 chr15 54408259 54408285 -49086689 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1000 512 246 79 8 chr15 54408750 54408877 -49086097 + B1_Mur2 SINE Alu 2 137 -12 6 1000 899 117 6 0 chr15 54408880 54409042 -49085932 + (TAGA)n Simple_repeat Simple_repeat 1 163 0 6 1000 260 330 87 62 chr15 54412300 54412560 -49082414 + MIRb SINE MIR 2 260 -2 6 1000 665 278 77 71 chr15 54413278 54413603 -49081371 - ORR1E LTR MaLR -10 349 23 6 1000 846 29 0 0 chr15 54414293 54414368 -49080606 + (TTC)n Simple_repeat Simple_repeat 1 75 0 6 1000 1403 39 0 16 chr15 54414368 54414551 -49080423 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 6 1000 846 29 0 0 chr15 54414551 54414578 -49080396 + (TTC)n Simple_repeat Simple_repeat 1 27 0 6 1000 293 253 0 44 chr15 54414594 54414617 -49080357 - Lx4B LINE L1 -432 6626 6606 6 1000 2694 167 43 11 chr15 54414617 54415083 -49079891 - Lx5 LINE L1 -4 7046 6566 6 1000 3628 100 8 8 chr15 54415081 54415567 -49079407 + L1_Mus4 LINE L1 6151 6636 0 6 1000 293 253 0 44 chr15 54415567 54415633 -49079341 - Lx4B LINE L1 -453 6605 6541 6 1000 387 0 0 0 chr15 54415636 54415679 -49079295 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1000 180 0 0 0 chr15 54416269 54416289 -49078685 + (TTG)n Simple_repeat Simple_repeat 3 22 0 6 1000 299 45 0 22 chr15 54416290 54416336 -49078638 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 6 1000 832 190 36 7 chr15 54417019 54417157 -49077817 - B1_Mus2 SINE Alu -5 142 1 6 1000 369 0 0 0 chr15 54417635 54417676 -49077298 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 6 1000 930 157 214 0 chr15 54417838 54418016 -49076958 + B3 SINE B2 1 216 0 6 1000 183 179 0 0 chr15 54418810 54418838 -49076136 + L2a LINE L2 3357 3384 -42 6 1000 330 26 0 0 chr15 54419277 54419316 -49075658 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1000 456 19 0 0 chr15 54419390 54419443 -49075531 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1000 23 0 0 0 chr15 54420615 54420638 -49074336 + AT_rich Low_complexity Low_complexity 1 23 0 6 1000 566 275 56 131 chr15 54420651 54420760 -49074214 - MER2 DNA MER2_type -97 248 158 6 1000 644 206 279 0 chr15 54420760 54420925 -49074049 - B3 SINE B2 -5 211 1 6 1000 566 275 56 131 chr15 54420925 54421083 -49073891 - MER2 DNA MER2_type -188 157 1 6 1000 379 357 0 14 chr15 54421706 54421848 -49073126 + MIRb SINE MIR 96 235 -33 6 1000 360 238 83 28 chr15 54422602 54422710 -49072264 + PB1D10 SINE Alu 3 116 -1 6 1000 443 120 53 0 chr15 54423089 54423164 -49071810 + Lx2 LINE L1 6565 6643 -354 6 1000 1516 104 9 35 chr15 54423164 54423393 -49071581 + Lx2 LINE L1 6775 6997 0 6 1000 21 0 0 0 chr15 54423413 54423434 -49071540 + AT_rich Low_complexity Low_complexity 1 21 0 6 1000 228 330 10 39 chr15 54423822 54423926 -49071048 + RMER12 LTR ERVK 749 849 -473 6 1000 551 353 29 25 chr15 54423917 54424196 -49070778 - B4A SINE B4 -4 288 9 6 1000 208 139 0 0 chr15 54424309 54424345 -49070629 + (A)n Simple_repeat Simple_repeat 1 36 0 6 1000 279 250 0 40 chr15 54424391 54424466 -49070508 - ID4_ SINE ID -10 73 2 6 1000 275 198 136 23 chr15 54424474 54424562 -49070412 - PB1D10 SINE Alu -3 114 17 6 1000 269 270 55 91 chr15 54424879 54424989 -49069985 - PB1D10 SINE Alu -2 115 10 6 1000 254 254 28 14 chr15 54425071 54425143 -49069831 + CT-rich Low_complexity Low_complexity 2 74 0 6 1000 342 339 33 16 chr15 54425400 54425583 -49069391 + MER5A DNA MER1_type 3 188 -1 6 1000 1358 276 105 11 chr15 54425904 54426432 -49068542 + Lx6 LINE L1 6507 7460 0 6 1000 360 0 0 0 chr15 54426483 54426523 -49068451 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1000 270 0 0 0 chr15 54426713 54426743 -49068231 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1000 297 264 22 54 chr15 54427029 54427121 -49067853 - B4 SINE B4 0 292 204 6 1000 2191 206 35 10 chr15 54427141 54427622 -49067352 - RLTR11A2 LTR ERVK -34 493 1 6 1000 683 304 53 24 chr15 54427622 54427825 -49067149 - B4A SINE B4 -83 209 1 6 1000 1407 264 152 19 chr15 54428307 54428933 -49066041 + L1MA8 LINE L1 5579 6287 -4 6 1000 22 0 0 0 chr15 54429124 54429146 -49065828 + AT_rich Low_complexity Low_complexity 1 22 0 6 1000 385 154 0 30 chr15 54430761 54430828 -49064146 - B1_Mm SINE Alu -12 135 71 6 1000 1001 147 14 0 chr15 54431407 54431550 -49063424 + B1_Mus1 SINE Alu 3 147 -1 6 1000 601 308 70 20 chr15 54432701 54432900 -49062074 - MER58A DNA MER1_type -15 209 1 6 1000 28 0 0 0 chr15 54434412 54434440 -49060534 + AT_rich Low_complexity Low_complexity 1 28 0 6 1000 229 339 8 48 chr15 54434657 54434781 -49060193 - MIRb SINE MIR -29 239 121 6 1000 804 251 42 0 chr15 54435050 54435217 -49059757 + ID_B1 SINE B4 51 224 0 6 1000 298 355 103 38 chr15 54435983 54436273 -49058701 - LTR16B1 LTR ERVL -159 321 13 6 1000 770 211 0 6 chr15 54436592 54436773 -49058201 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 1000 311 264 96 100 chr15 54437360 54437835 -49057139 + L1M4 LINE L1 5029 5490 -678 6 1000 8879 36 1 4 chr15 54437887 54438885 -49056089 + L1Md_F2 LINE L1 5588 6582 0 6 1000 2071 146 30 25 chr15 54439673 54440038 -49054936 - ORR1B2 LTR MaLR 0 367 1 6 1000 229 274 331 0 chr15 54440318 54440442 -49054532 - L2c LINE L2 0 3426 3262 6 1000 851 293 69 45 chr15 54440442 54440774 -49054200 + MER2 DNA MER2_type 2 341 -4 6 1000 273 239 0 82 chr15 54441157 54441230 -49053744 + ID4_ SINE ID 2 68 -15 6 1000 471 112 0 0 chr15 54441246 54441335 -49053639 + (TC)n Simple_repeat Simple_repeat 2 90 0 6 1000 477 50 0 0 chr15 54441352 54441412 -49053562 + (GA)n Simple_repeat Simple_repeat 2 61 0 6 1000 269 264 90 104 chr15 54441412 54441556 -49053418 - MLT1B LTR MaLR -18 372 231 6 1000 454 277 211 4 chr15 54442711 54442976 -49051998 + L1MA5 LINE L1 5959 6278 -22 6 1000 255 282 34 34 chr15 54443197 54443285 -49051689 - MIR SINE MIR 0 262 175 6 1000 1674 209 13 20 chr15 54443329 54443687 -49051287 + MTD LTR MaLR 54 419 0 6 1000 480 307 45 7 chr15 54445435 54445589 -49049385 - B4A SINE B4 0 292 133 6 1000 360 0 0 0 chr15 54445589 54445629 -49049345 + (TC)n Simple_repeat Simple_repeat 2 41 0 6 1000 311 263 46 99 chr15 54445889 54446000 -49048974 + RMER15 LTR ERVL 409 514 -61 6 1000 2664 86 0 3 chr15 54446000 54446328 -49048646 + ORR1A2 LTR MaLR 1 327 0 6 1000 311 263 46 99 chr15 54446328 54446347 -49048627 + RMER15 LTR ERVL 515 532 -43 6 1000 524 238 137 65 chr15 54446518 54446671 -49048303 + RSINE1 SINE B4 2 165 0 6 1000 224 122 0 24 chr15 54446672 54446714 -49048260 + (TA)n Simple_repeat Simple_repeat 1 41 0 6 1000 936 208 48 68 chr15 54447030 54447278 -49047696 + RMER1B Other Other 824 1066 0 6 1000 188 279 126 11 chr15 54447780 54447867 -49047107 - MIR SINE MIR -64 198 102 6 1000 280 320 55 0 chr15 54448326 54448454 -49046520 + L1MA5 LINE L1 6155 6289 -11 6 1000 1975 70 19 27 chr15 54448478 54448741 -49046233 + L1_Mus2 LINE L1 6306 6566 0 6 1000 209 130 12 61 chr15 54450108 54450190 -49044784 + (TCTG)n Simple_repeat Simple_repeat 4 81 0 6 1000 546 143 0 0 chr15 54451276 54451367 -49043607 + (CATA)n Simple_repeat Simple_repeat 2 92 0 6 1000 785 243 16 28 chr15 54451528 54451710 -49043264 - B3A SINE B2 -18 180 1 6 1000 383 306 24 48 chr15 54452143 54452308 -49042666 - MIR3 SINE MIR -21 187 27 6 1000 358 324 22 7 chr15 54453314 54453451 -49041523 - MER121 Unknown Unknown -159 253 115 6 1000 342 167 0 0 chr15 54453709 54453763 -49041211 + polypurine Low_complexity Low_complexity 70 123 0 6 1000 1457 274 60 20 chr15 54453763 54454217 -49040757 + Lx6 LINE L1 6963 7434 -26 6 1000 240 163 0 0 chr15 54454217 54454260 -49040714 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 6 1000 4000 182 87 14 chr15 54454394 54455180 -49039794 + Lx5 LINE L1 6208 7050 0 7 1000 937 323 65 62 chr15 54455192 54455835 -49039139 - Lx8 LINE L1 -5 7468 6824 7 1000 235 339 23 0 chr15 54455863 54455978 -49038996 + L2b LINE L2 2958 3077 -342 7 1000 26 30 0 0 chr15 54456111 54456144 -49038830 + AT_rich Low_complexity Low_complexity 1 33 0 7 1000 339 233 14 14 chr15 54456422 54456496 -49038478 - RSINE1 SINE B4 -13 152 79 7 1000 2154 51 0 8 chr15 54456669 54456925 -49038049 - L1Md_F2 LINE L1 -12 6570 6317 7 1000 304 289 191 39 chr15 54458615 54458871 -49036103 + L1MA4 LINE L1 5315 5609 -691 7 1000 774 271 48 19 chr15 54458873 54459080 -49035894 + B3 SINE B2 2 214 -2 7 1000 459 0 0 0 chr15 54459213 54459264 -49035710 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 1000 402 319 12 19 chr15 54459271 54459429 -49035545 + L1MA4 LINE L1 5639 5801 -499 7 1000 562 239 7 0 chr15 54459486 54459624 -49035350 + L1MA4 LINE L1 5789 5927 -373 7 1000 258 250 0 0 chr15 54459641 54459713 -49035261 + (CA)n Simple_repeat Simple_repeat 1 72 0 7 1000 245 279 166 65 chr15 54459853 54459929 -49035045 + ORR1E LTR MaLR 6 96 -263 7 1000 2302 176 41 34 chr15 54459929 54460346 -49034628 - MTC LTR MaLR 0 421 2 7 1000 245 279 166 65 chr15 54460346 54460438 -49034536 + ORR1E LTR MaLR 97 191 -168 7 1000 535 313 87 0 chr15 54460712 54460942 -49034032 - L1M3e LINE L1 -6664 366 117 7 1000 413 318 51 55 chr15 54460948 54461201 -49033773 + L1M2 LINE L1 3992 4243 -1900 7 1000 981 0 0 0 chr15 54461202 54461311 -49033663 + (TTC)n Simple_repeat Simple_repeat 3 111 0 7 1000 1027 14 35 0 chr15 54461311 54461452 -49033522 + (TC)n Simple_repeat Simple_repeat 1 146 0 7 1000 829 245 37 62 chr15 54461465 54461818 -49033156 + L1M2 LINE L1 4269 4623 -1520 7 1000 222 128 0 0 chr15 54462903 54462942 -49032032 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 1000 180 296 14 27 chr15 54463725 54463798 -49031176 - L2a LINE L2 0 3426 3355 7 1000 1095 311 73 7 chr15 54464412 54464875 -49030099 + Lx8 LINE L1 6746 7239 -234 7 1000 1970 124 3 7 chr15 54465060 54465352 -49029622 + Lx LINE L1 6358 6648 -6 7 1000 236 346 103 67 chr15 54465358 54465581 -49029393 - ORR1E LTR MaLR -52 307 77 7 1000 1445 246 78 11 chr15 54465692 54466049 -49028925 + MTD LTR MaLR 4 384 -35 7 1000 315 148 74 0 chr15 54466079 54466133 -49028841 - B1_Mur2 SINE Alu -7 142 85 7 1000 4643 179 34 29 chr15 54466133 54467026 -49027948 - RMER13B LTR ERVK 0 908 12 7 1000 41660 11 3 0 chr15 54467026 54473610 -49021364 - L1Md_A LINE L1 0 6582 37 7 1000 516 261 0 9 chr15 54473610 54473722 -49021252 - B1_Mur2 SINE Alu -34 115 5 7 1000 431 300 139 12 chr15 54473749 54473921 -49021053 - B3A SINE B2 -1 197 4 7 1000 3443 204 58 54 chr15 54474254 54475030 -49019944 - RMER1A Other Other -24 1006 228 7 1000 483 188 213 7 chr15 54476985 54477135 -49017839 + Lx8 LINE L1 6975 7155 -318 7 1000 340 185 125 36 chr15 54477148 54477260 -49017714 + Lx8 LINE L1 7352 7473 0 7 1000 298 138 6 81 chr15 54477326 54477500 -49017474 + (TATAA)n Simple_repeat Simple_repeat 3 163 0 7 1000 322 96 39 78 chr15 54477507 54477687 -49017287 + (TTATA)n Simple_repeat Simple_repeat 4 176 0 7 1000 33 74 0 36 chr15 54477692 54477724 -49017250 + AT_rich Low_complexity Low_complexity 1 29 0 7 1000 883 265 14 14 chr15 54477724 54477931 -49017043 + B3 SINE B2 2 208 -8 7 1000 33 74 0 36 chr15 54477931 54478010 -49016964 + AT_rich Low_complexity Low_complexity 1 79 0 7 1000 363 315 19 0 chr15 54479041 54479149 -49015825 + PB1D10 SINE Alu 3 112 -5 7 1000 4426 142 26 6 chr15 54480730 54481391 -49013583 + Lx4A LINE L1 6385 7058 0 7 1000 381 168 53 12 chr15 54481436 54481605 -49013369 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 7 1000 330 325 91 82 chr15 54481804 54482156 -49012818 - MLT1A LTR MaLR -19 355 1 7 1000 180 348 71 63 chr15 54482752 54482878 -49012096 - MIRc SINE MIR -112 156 30 7 1000 590 296 102 22 chr15 54483075 54483300 -49011674 - MER21B LTR ERV1 -109 754 512 7 1000 870 321 86 17 chr15 54483321 54483670 -49011304 - MER21B LTR ERV1 -427 436 64 7 1000 845 281 9 5 chr15 54483707 54483929 -49011045 + B4A SINE B4 3 225 -67 7 1000 884 213 121 11 chr15 54483936 54484126 -49010848 + B3 SINE B2 1 211 -5 7 1000 321 26 0 0 chr15 54484243 54484281 -49010693 + (CACAT)n Simple_repeat Simple_repeat 3 40 0 7 1000 240 323 68 92 chr15 54484323 54484572 -49010402 - RMER15 LTR ERVL -15 560 318 7 1000 5564 112 27 3 chr15 54484933 54485711 -49009263 - Lx3_Mus LINE L1 -5 7004 6208 7 1000 673 149 0 0 chr15 54485711 54485832 -49009142 + Lx3_Mus LINE L1 6089 6209 -800 7 1000 824 193 0 7 chr15 54486257 54486403 -49008571 - B1_Mur2 SINE Alu -1 148 4 7 1000 405 316 64 61 chr15 54487589 54487916 -49007058 + L1MC LINE L1 5344 5671 -662 7 1000 184 283 33 0 chr15 54488510 54488570 -49006404 + MIR SINE MIR 92 153 -109 7 1000 418 228 184 16 chr15 54488852 54488977 -49005997 - MTD LTR MaLR -161 258 113 7 1000 625 209 0 0 chr15 54489009 54489124 -49005850 - MTD LTR MaLR -299 120 6 7 1000 222 91 0 0 chr15 54489152 54489185 -49005789 + (ATG)n Simple_repeat Simple_repeat 3 35 0 7 1000 307 232 37 92 chr15 54489506 54489615 -49005359 + L2c LINE L2 3285 3387 0 7 1000 21 0 0 0 chr15 54489928 54489949 -49005025 + AT_rich Low_complexity Low_complexity 1 21 0 7 1000 507 282 0 30 chr15 54490317 54490452 -49004522 + ID_B1 SINE B4 93 223 -1 7 1000 24 0 0 0 chr15 54490597 54490621 -49004353 + AT_rich Low_complexity Low_complexity 1 24 0 7 1000 972 179 46 110 chr15 54491578 54491860 -49003114 - Lx5 LINE L1 -4 7046 6783 7 1000 1228 48 0 26 chr15 54492947 54493084 -49001890 + B1_Mus2 SINE Alu 1 137 -10 7 1000 248 0 31 0 chr15 54493084 54493116 -49001858 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 7 1000 1228 48 0 26 chr15 54493116 54493129 -49001845 + B1_Mus2 SINE Alu 138 147 0 7 1000 897 181 21 83 chr15 54493141 54493334 -49001640 + B2_Mm2 SINE B2 1 181 -14 7 1000 1210 50 0 0 chr15 54493469 54493608 -49001366 + B1_Mus2 SINE Alu 2 140 -7 7 1000 422 202 13 0 chr15 54493715 54493794 -49001180 + MTC LTR MaLR 1 80 -341 7 1000 1278 210 58 4 chr15 54493795 54494053 -49000921 + Lx4B LINE L1 6787 7058 0 7 1000 3152 124 22 0 chr15 54494081 54494539 -49000435 + Lx2A LINE L1 6533 7000 -8 7 1000 279 0 0 0 chr15 54494539 54494570 -49000404 + (GGAA)n Simple_repeat Simple_repeat 3 33 0 7 1000 865 27 0 18 chr15 54494571 54494685 -49000289 + (GGAAA)n Simple_repeat Simple_repeat 4 115 0 7 1000 2379 66 0 7 chr15 54494711 54495001 -48999973 + L1_Mus1 LINE L1 6280 6567 0 7 1000 1231 75 0 0 chr15 54495027 54495173 -48999801 + B1_Mus2 SINE Alu 2 147 0 7 1000 563 168 37 18 chr15 54495217 54495326 -48999648 + MTC LTR MaLR 121 231 -190 7 1000 903 215 22 32 chr15 54495365 54495564 -48999410 + MTC LTR MaLR 177 421 0 7 1000 1524 201 7 0 chr15 54495669 54495948 -48999026 + L1VL4 LINE L1 380 660 -5997 7 1000 22675 127 8 7 chr15 54495945 54500000 -48994974 + L1VL4 LINE L1 778 4834 -1049 7 1000 6573 106 47 4 chr15 54500000 54501727 -48993247 + L1_Mus3 LINE L1 4835 6637 -1 1 1000 1683 190 53 53 chr15 54502153 54502531 -48992443 + ORR1C1 LTR MaLR 1 378 0 2 1000 36111 42 0 2 chr15 54502831 54509026 -48985948 - L1Md_T LINE L1 0 6585 307 3 1000 298 315 45 85 chr15 54509026 54509203 -48985771 + B4 SINE B4 54 223 -69 4 1000 557 214 116 23 chr15 54509076 54509205 -48985769 + B1_Mur4 SINE Alu 10 150 0 5 1000 769 303 11 0 chr15 54510977 54511162 -48983812 + B3A SINE B2 2 188 -10 6 1000 23 33 0 0 chr15 54511823 54511853 -48983121 + AT_rich Low_complexity Low_complexity 1 30 0 7 1000 270 274 0 66 chr15 54512774 54512895 -48982079 + CT-rich Low_complexity Low_complexity 3 115 0 8 1000 432 0 0 0 chr15 54512924 54512972 -48982002 + (TC)n Simple_repeat Simple_repeat 1 48 0 9 1000 456 19 0 0 chr15 54512974 54513027 -48981947 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1000 656 177 89 37 chr15 54513035 54513170 -48981804 - B1_Mur3 SINE Alu -6 143 2 1 1000 453 295 0 8 chr15 54513778 54513901 -48981073 - ID_B1 SINE B4 0 224 103 1 1000 228 0 0 0 chr15 54514598 54514625 -48980349 + L1_Mm LINE L1 5560 5586 -297 1 1000 8898 12 0 0 chr15 54514625 54515621 -48979353 + L1Md_A LINE L1 5587 6582 0 1 1000 378 0 0 0 chr15 54518436 54518478 -48976496 + (TTA)n Simple_repeat Simple_repeat 1 42 0 1 1000 1232 179 91 39 chr15 54518691 54518999 -48975975 + RMER1C Other Other 1019 1342 0 1 1000 230 245 0 0 chr15 54519044 54519097 -48975877 + L1VL4 LINE L1 183 235 -6067 1 1000 17533 79 33 9 chr15 54519100 54522361 -48972613 + L1VL4 LINE L1 213 3556 -3 1 1000 242 287 40 13 chr15 54523822 54523922 -48971052 + MIR SINE MIR 78 172 -90 1 1000 314 286 143 48 chr15 54524622 54524769 -48970205 - HAL1-3A_ME LINE L1 -414 2444 2284 1 1000 724 317 62 53 chr15 54525378 54525701 -48969273 - MER58B DNA MER1_type -14 327 2 2 1001 239 341 23 0 chr15 54525957 54526045 -48968929 + L2a LINE L2 1981 2070 -1349 2 1001 250 270 54 0 chr15 54526351 54526425 -48968549 + ID4 SINE ID 2 79 -4 2 1001 561 30 0 0 chr15 54526750 54526817 -48968157 + (TC)n Simple_repeat Simple_repeat 1 67 0 2 1001 279 0 0 0 chr15 54527162 54527193 -48967781 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1001 592 273 65 55 chr15 54527631 54527848 -48967126 - Tigger5 DNA MER2_type -5 2401 2183 2 1001 720 330 20 50 chr15 54528106 54528406 -48966568 - B4A SINE B4 0 292 2 2 1001 235 338 54 40 chr15 54528412 54528560 -48966414 + L2a LINE L2 3259 3408 -18 2 1001 382 270 71 0 chr15 54528605 54528739 -48966235 + MLT1A0 LTR MaLR 8 160 -214 2 1001 3942 40 0 0 chr15 54528739 54529237 -48965737 + L1Md_F2 LINE L1 5089 5586 -297 2 1001 8121 49 2 0 chr15 54529237 54530231 -48964743 + L1Md_F2 LINE L1 5587 6582 0 2 1001 295 247 93 12 chr15 54530294 54530380 -48964594 + MLT1A0 LTR MaLR 294 386 -4 2 1001 375 355 21 21 chr15 54530964 54531151 -48963823 + MIR3 SINE MIR 13 199 -9 2 1001 24 0 0 0 chr15 54531531 54531555 -48963419 + AT_rich Low_complexity Low_complexity 1 24 0 3 1001 580 281 14 14 chr15 54532531 54532679 -48962295 + ID_B1 SINE B4 77 224 0 3 1001 197 348 47 82 chr15 54532708 54532916 -48962058 - MIRb SINE MIR -53 215 10 3 1001 334 250 229 0 chr15 54534853 54534949 -48960025 - B1F1 SINE Alu -5 144 27 3 1001 378 0 0 0 chr15 54534985 54535027 -48959947 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1001 256 376 86 38 chr15 54535217 54535340 -48959634 + MLT1D LTR MaLR 1 137 -368 3 1001 1611 36 0 20 chr15 54535340 54535536 -48959438 - B2_Mm1t SINE B2 0 193 2 3 1001 256 376 86 38 chr15 54535536 54535622 -48959352 + MLT1D LTR MaLR 138 220 -285 3 1001 527 341 39 14 chr15 54535637 54535845 -48959129 + MLT1D LTR MaLR 279 491 -14 3 1001 372 308 69 26 chr15 54536198 54536431 -48958543 + Lx7 LINE L1 5589 5831 -1865 3 1001 181 385 13 0 chr15 54536462 54536540 -48958434 + MIR SINE MIR 54 132 -76 3 1001 367 312 221 60 chr15 54536822 54537057 -48957917 + B4A SINE B4 2 274 -18 3 1001 666 382 71 0 chr15 54537431 54537813 -48957161 + MLT1E2 LTR MaLR 219 627 0 4 1001 486 311 122 6 chr15 54537877 54538058 -48956916 - MamRep605 Unknown Unknown -49 827 626 4 1001 183 184 39 13 chr15 54538262 54538339 -48956635 + (TTATA)n Simple_repeat Simple_repeat 2 80 0 4 1001 361 304 39 0 chr15 54538544 54538646 -48956328 - ID_B1 SINE B4 0 224 119 4 1001 403 188 59 0 chr15 54538752 54538853 -48956121 + Lx9 LINE L1 7532 7638 -6 4 1001 23 0 0 0 chr15 54538853 54538876 -48956098 + AT_rich Low_complexity Low_complexity 1 23 0 4 1001 225 314 74 23 chr15 54538934 54539110 -48955864 - L1M5 LINE L1 -1054 5092 4908 4 1001 924 282 85 58 chr15 54539357 54539734 -48955240 + MTD LTR MaLR 18 404 -15 4 1001 294 29 0 0 chr15 54539811 54539846 -48955128 + (GTTTG)n Simple_repeat Simple_repeat 5 39 0 4 1001 745 209 7 45 chr15 54539858 54540013 -48954961 - B1_Mur1 SINE Alu 0 149 1 4 1001 388 161 0 0 chr15 54540364 54540445 -48954529 - Lx9 LINE L1 -29 7615 7535 5 1001 447 355 91 0 chr15 54541518 54541738 -48953236 - MIR SINE MIR -5 257 18 5 1001 244 270 104 57 chr15 54541738 54541844 -48953130 + PB1D7 SINE Alu 8 118 -2 5 1001 3142 272 101 17 chr15 54542600 54543649 -48951325 + Lx8 LINE L1 6321 7457 -16 5 1001 26 0 0 0 chr15 54543660 54543686 -48951288 + AT_rich Low_complexity Low_complexity 1 26 0 5 1001 21 0 0 0 chr15 54544646 54544667 -48950307 + AT_rich Low_complexity Low_complexity 1 21 0 5 1001 714 226 62 51 chr15 54545378 54545555 -48949419 + ORR1D1 LTR MaLR 3 181 -193 5 1001 987 171 0 0 chr15 54545581 54545798 -48949176 + C-rich Low_complexity Low_complexity 1 217 0 5 1001 255 247 11 69 chr15 54545800 54545887 -48949087 + ORR1D1 LTR MaLR 235 316 -58 5 1001 2109 219 22 65 chr15 54545895 54546403 -48948571 + RMER19C LTR ERVK 126 611 0 5 1001 453 224 0 0 chr15 54546403 54546476 -48948498 + ORR1D1 LTR MaLR 295 367 -7 5 1001 250 344 32 32 chr15 54547718 54547874 -48947100 - MIRb SINE MIR -89 179 24 5 1001 1195 142 98 0 chr15 54548516 54548721 -48946253 + URR1B DNA MER1_type 1 225 0 6 1001 29956 105 18 4 chr15 54549160 54555371 -48939603 + L1_Mus1 LINE L1 262 6567 0 6 1001 634 196 49 28 chr15 54555564 54555706 -48939268 - B1_Mur3 SINE Alu -4 145 1 6 1001 297 315 86 20 chr15 54555743 54555895 -48939079 + RSINE1 SINE B4 4 165 0 6 1001 233 267 67 22 chr15 54556230 54556328 -48938646 + MTE2a LTR MaLR 280 379 0 6 1001 269 278 27 36 chr15 54556414 54556526 -48938448 - MIR SINE MIR -48 214 104 6 1001 982 195 5 45 chr15 54557473 54557693 -48937281 - Lx4A LINE L1 0 7058 6848 6 1001 251 301 95 19 chr15 54557868 54557973 -48937001 + MIR SINE MIR 9 121 -141 6 1001 269 246 16 0 chr15 54558099 54558160 -48936814 + CT-rich Low_complexity Low_complexity 4 65 0 6 1001 240 281 45 135 chr15 54558380 54558403 -48936571 - B3 SINE B2 -114 102 2 6 1001 430 235 2 12 chr15 54558403 54558491 -48936483 - B4A SINE B4 -81 84 2 7 1001 239 156 31 15 chr15 54558899 54558964 -48936010 + (TATAA)n Simple_repeat Simple_repeat 4 69 0 7 1001 658 204 30 0 chr15 54559500 54559632 -48935342 + B1_Mur4 SINE Alu 1 136 -14 7 1001 519 69 0 0 chr15 54559670 54559742 -48935232 + (TAGA)n Simple_repeat Simple_repeat 1 72 0 7 1001 2880 49 0 3 chr15 54559755 54560102 -48934872 + ORR1A1 LTR MaLR 1 346 0 7 1001 573 226 67 45 chr15 54560102 54560229 -48934745 + B1_Mur3 SINE Alu 7 137 -13 7 1001 988 75 7 14 chr15 54560252 54560400 -48934574 + (TAGA)n Simple_repeat Simple_repeat 2 148 0 7 1001 687 206 46 0 chr15 54560414 54560545 -48934429 + B1_Mus1 SINE Alu 4 140 -8 7 1001 371 181 14 0 chr15 54561833 54561905 -48933069 + Lx7 LINE L1 7187 7259 -437 7 1001 922 120 8 0 chr15 54561929 54562062 -48932912 - B2_Mm2 SINE B2 -61 134 1 7 1001 506 206 0 0 chr15 54562063 54562170 -48932804 + Lx7 LINE L1 7247 7353 -343 7 1001 566 40 0 26 chr15 54562170 54562248 -48932726 + (TTTC)n Simple_repeat Simple_repeat 2 77 0 8 1001 6921 77 19 12 chr15 54562285 54563299 -48931675 - L1_Mus3 LINE L1 -1 6637 5617 8 1001 263 250 86 50 chr15 54563300 54563439 -48931535 + Lx6 LINE L1 7313 7456 -4 8 1001 21 71 0 0 chr15 54563503 54563545 -48931429 + AT_rich Low_complexity Low_complexity 1 42 0 8 1001 318 265 214 14 chr15 54563561 54564038 -48930936 + L1MC LINE L1 2761 3353 -2793 8 1001 609 178 0 0 chr15 54564042 54564160 -48930814 + GA-rich Low_complexity Low_complexity 4 121 0 8 1001 2093 57 70 3 chr15 54564425 54564709 -48930265 + L1_Mus1 LINE L1 6259 6561 -6 8 1001 365 228 0 0 chr15 54564731 54564832 -48930142 + L1MA6 LINE L1 6199 6299 -1 8 1001 519 314 133 64 chr15 54565066 54565471 -48929503 + L1MC LINE L1 3489 3921 -2225 8 1001 3601 47 2 2 chr15 54565857 54566307 -48928667 + L1Md_F2 LINE L1 6133 6582 0 8 1001 349 236 13 40 chr15 54566573 54566648 -48928326 + ID4 SINE ID 5 77 -6 8 1001 217 312 41 51 chr15 54566648 54566671 -48928303 + B3 SINE B2 5 101 -115 9 1001 684 96 34 7 chr15 54566724 54566871 -48928103 + (TAGA)n Simple_repeat Simple_repeat 3 153 0 9 1001 205 111 67 0 chr15 54566933 54566978 -48927996 + (CAGA)n Simple_repeat Simple_repeat 2 49 0 9 1001 186 103 0 0 chr15 54566978 54567007 -48927967 + (CATA)n Simple_repeat Simple_repeat 4 32 0 9 1001 553 334 156 38 chr15 54567018 54567544 -48927430 + HAL1 LINE L1 1390 1977 -530 9 1001 1572 314 117 30 chr15 54567562 54568702 -48926272 - Lx9 LINE L1 -5 7639 6401 9 1001 249 57 0 0 chr15 54568702 54568737 -48926237 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 9 1001 1572 329 92 18 chr15 54568737 54568772 -48926202 - Lx9 LINE L1 -1244 6400 6362 9 1001 489 220 36 45 chr15 54568774 54568998 -48925976 - RMER17D2 LTR ERVK -340 469 248 9 1001 2192 253 115 43 chr15 54568999 54569907 -48925067 - L1_Rod LINE L1 -1213 4634 3656 9 1001 249 83 0 0 chr15 54569907 54569943 -48925031 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 9 1001 2192 253 115 43 chr15 54569943 54570146 -48924828 - L1_Rod LINE L1 -2192 3655 3444 9 1001 246 277 12 12 chr15 54570560 54570644 -48924330 + Lx9 LINE L1 7242 7325 -319 1 1001 305 174 0 75 chr15 54570678 54570784 -48924190 + C-rich Low_complexity Low_complexity 2 99 0 1 1001 290 288 12 0 chr15 54572127 54572207 -48922767 + (TG)n Simple_repeat Simple_repeat 1 81 0 1 1001 646 298 23 0 chr15 54572209 54572380 -48922594 - B4A SINE B4 0 292 118 1 1001 4199 122 3 2 chr15 54573140 54573750 -48921224 - RMER19C LTR ERVK 0 611 1 1 1001 5518 150 41 37 chr15 54573750 54574927 -48920047 - MurERV4_19-int LTR ERVK 0 5780 4600 1 1001 865 271 39 57 chr15 54575036 54575450 -48919524 - RLTR11B LTR ERVK -29 412 1 1 1001 327 65 0 0 chr15 54576046 54576092 -48918882 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 1 1001 318 26 0 0 chr15 54576216 54576255 -48918719 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1001 985 90 15 0 chr15 54576255 54576388 -48918586 - B1_Mm SINE Alu -9 138 4 1 1001 486 252 39 92 chr15 54576388 54576408 -48918566 - B4 SINE B4 -75 217 73 1 1001 342 0 0 0 chr15 54576823 54576861 -48918113 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1001 456 35 0 0 chr15 54577213 54577271 -48917703 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1001 1290 72 0 4 chr15 54578524 54578761 -48916213 + (TC)n Simple_repeat Simple_repeat 1 236 0 1 1001 207 0 0 0 chr15 54579812 54579835 -48915139 + (GA)n Simple_repeat Simple_repeat 1 23 0 1 1001 1181 96 0 11 chr15 54579848 54580027 -48914947 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 1 1001 322 231 63 13 chr15 54580110 54580189 -48914785 + B4A SINE B4 6 88 -204 1 1001 258 32 0 0 chr15 54580331 54580362 -48914612 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1001 189 369 19 37 chr15 54581284 54581391 -48913583 + MIRm SINE MIR 161 265 -11 1 1001 368 310 36 119 chr15 54581404 54581598 -48913376 + Charlie19a DNA Charlie 52 229 -157 1 1001 322 274 69 26 chr15 54581743 54581859 -48913115 + MIR SINE MIR 2 122 -140 1 1001 565 215 107 0 chr15 54581884 54582005 -48912969 + B1_Mus2 SINE Alu 2 135 -12 1 1001 258 175 35 0 chr15 54582007 54582064 -48912910 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 1 1001 373 304 174 7 chr15 54582724 54582873 -48912101 + MER5A DNA MER1_type 16 189 0 1 1001 270 0 0 0 chr15 54583246 54583276 -48911698 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 1 1001 726 12 0 0 chr15 54584436 54584519 -48910455 + (TA)n Simple_repeat Simple_repeat 1 83 0 1 1001 539 318 36 5 chr15 54585787 54585983 -48908991 + MER2 DNA MER2_type 144 345 0 1 1001 1078 278 14 31 chr15 54586425 54586715 -48908259 + B4A SINE B4 8 292 0 1 1001 437 235 69 0 chr15 54586775 54586877 -48908097 + PB1D10 SINE Alu 1 109 -8 1 1001 193 315 49 120 chr15 54587134 54587318 -48907656 - L2a LINE L2 0 3426 3256 1 1001 2194 126 124 11 chr15 54587368 54587746 -48907228 - MTC LTR MaLR 0 421 1 1 1001 241 355 72 0 chr15 54588390 54588524 -48906450 + MIRb SINE MIR 2 148 -120 1 1001 342 196 0 0 chr15 54588793 54588900 -48906074 + (TCTCTG)n Simple_repeat Simple_repeat 2 108 0 1 1001 976 293 25 7 chr15 54588929 54589214 -48905760 - B4A SINE B4 -2 290 1 1 1001 193 327 105 9 chr15 54589239 54589344 -48905630 - MIRb SINE MIR -131 137 23 1 1001 192 303 51 26 chr15 54590099 54590177 -48904797 - L4 LINE RTE -1730 299 220 1 1001 21 71 0 0 chr15 54590646 54590688 -48904286 + AT_rich Low_complexity Low_complexity 1 42 0 1 1001 585 285 24 0 chr15 54590710 54590833 -48904141 - RSINE1 SINE B4 -38 127 2 1 1001 229 402 0 0 chr15 54591206 54591298 -48903676 - Charlie16a DNA MER1_type -212 130 39 1 1001 441 0 0 0 chr15 54591432 54591481 -48903493 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 1001 285 381 35 56 chr15 54591602 54591841 -48903133 - MIRb SINE MIR -22 246 14 1 1001 26 64 0 0 chr15 54593867 54593914 -48901060 + AT_rich Low_complexity Low_complexity 1 47 0 1 1001 331 250 34 45 chr15 54594200 54594288 -48900686 - B1F1 SINE Alu -58 91 5 1 1001 825 306 43 28 chr15 54594371 54594808 -48900166 - L1M1 LINE L1 -517 5786 5343 1 1001 790 305 5 32 chr15 54597140 54597267 -48897707 - B4A SINE B4 -61 231 107 1 1001 1839 122 54 60 chr15 54597267 54597598 -48897376 + ORR1A4 LTR MaLR 1 329 0 1 1001 790 305 5 32 chr15 54597598 54597687 -48897287 - B4A SINE B4 -186 106 21 1 1001 317 355 57 0 chr15 54597857 54597981 -48896993 + MER20 DNA MER1_type 10 140 -79 1 1001 291 114 0 0 chr15 54598202 54598246 -48896728 + (CAGA)n Simple_repeat Simple_repeat 4 47 0 1 1001 542 259 37 7 chr15 54598388 54598508 -48896466 + MTE-int LTR MaLR 1404 1527 -53 1 1001 1147 282 82 34 chr15 54598508 54598861 -48896113 + ORR1D2 LTR MaLR 1 370 0 1 1001 449 311 53 0 chr15 54600274 54600425 -48894549 - MER58B DNA MER1_type -12 329 171 1 1001 180 111 0 0 chr15 54600427 54600454 -48894520 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1001 411 309 13 111 chr15 54600544 54600697 -48894277 - B4A SINE B4 -152 140 3 1 1001 6468 61 0 8 chr15 54601025 54601918 -48893056 - L1Md_F2 LINE L1 -1130 4753 3868 1 1001 7647 49 3 3 chr15 54601916 54603570 -48891404 + L1Md_F2 LINE L1 4883 6539 -43 1 1001 408 0 15 61 chr15 54603570 54603636 -48891338 + (TAAA)n Simple_repeat Simple_repeat 1 63 0 1 1001 7573 46 0 6 chr15 54603636 54603654 -48891320 + L1Md_F2 LINE L1 6540 6556 -26 1 1001 389 318 95 71 chr15 54603654 54603840 -48891134 + MLT1A0 LTR MaLR 90 282 -83 1 1001 1789 208 50 5 chr15 54603840 54604241 -48890733 + MTC LTR MaLR 3 421 0 1 1001 389 318 95 71 chr15 54604241 54604264 -48890710 + MLT1A0 LTR MaLR 283 304 -61 1 1001 491 299 22 15 chr15 54604436 54604572 -48890402 + B1F1 SINE Alu 10 146 -3 1 1001 317 257 0 0 chr15 54604572 54604642 -48890332 + ID4 SINE ID 2 71 -12 1 1001 3859 136 86 23 chr15 54604642 54605350 -48889624 - RMER6A LTR ERVK 0 756 4 1 1001 1238 96 11 11 chr15 54605398 54605577 -48889397 + B2_Mm2 SINE B2 3 181 -14 1 1001 189 107 0 0 chr15 54606122 54606150 -48888824 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1001 359 252 39 109 chr15 54606478 54606510 -48888464 + MT2B LTR ERVL 137 157 -444 1 1001 665 222 44 7 chr15 54606510 54606646 -48888328 + B1_Mur3 SINE Alu 2 142 -7 1 1001 1684 183 68 15 chr15 54606724 54607063 -48887911 + ORR1B2 LTR MaLR 3 359 -8 1 1001 207 325 100 0 chr15 54607532 54607612 -48887362 + L2 LINE L2 2666 2753 -666 1 1001 21 57 0 0 chr15 54607890 54607925 -48887049 + AT_rich Low_complexity Low_complexity 1 35 0 1 1001 882 252 72 22 chr15 54608066 54608289 -48886685 + B4 SINE B4 48 281 -11 1 1001 372 272 0 0 chr15 54608533 54608614 -48886360 + RMER30 DNA MER1_type 2 82 -120 1 1001 300 132 7 52 chr15 54608632 54608703 -48886271 - ORR1B1 LTR MaLR -1 420 343 1 1001 3446 185 85 124 chr15 54609030 54609138 -48885836 - RMER1A Other Other -3 1027 913 1 1001 297 0 0 0 chr15 54609138 54609171 -48885803 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1001 3446 222 102 90 chr15 54609171 54610635 -48884339 - RMER1A Other Other -118 912 13 1 1001 996 75 0 0 chr15 54610635 54610769 -48884205 + (TC)n Simple_repeat Simple_repeat 1 134 0 1 1001 1071 304 64 39 chr15 54610769 54610840 -48884134 - RMER1B Other Other -946 120 48 1 1001 192 40 0 0 chr15 54610978 54611003 -48883971 + (ATTTG)n Simple_repeat Simple_repeat 2 26 0 1 1001 1538 127 53 8 chr15 54611161 54611422 -48883552 - ORR1B2 LTR MaLR -39 328 56 1 1001 821 108 87 4 chr15 54611422 54611675 -48883299 + RLTR15 LTR ERVK 1 343 -16 1 1001 379 234 0 25 chr15 54611728 54611807 -48883167 + RMER30 DNA MER1_type 119 195 -7 1 1001 372 300 107 48 chr15 54612026 54612194 -48882780 + B4 SINE B4 29 206 -86 1 1001 201 289 19 0 chr15 54613222 54613274 -48881700 + (CTGGGG)n Simple_repeat Simple_repeat 6 58 0 1 1001 267 262 0 0 chr15 54613921 54614001 -48880973 + BC1_Mm scRNA scRNA 28 107 -45 1 1001 289 243 176 0 chr15 54614093 54614167 -48880807 + ID_B1 SINE B4 137 223 -1 1 1001 296 245 121 54 chr15 54614189 54614413 -48880561 + L1M4 LINE L1 3339 3577 -2569 1 1001 325 317 38 38 chr15 54614415 54614520 -48880454 + B1F1 SINE Alu 1 105 -44 1 1001 509 272 64 44 chr15 54614656 54614906 -48880068 + L1MC4a LINE L1 6272 6526 -1356 1 1001 467 188 26 13 chr15 54615076 54615227 -48879747 + (TATG)n Simple_repeat Simple_repeat 4 156 0 1 1001 462 325 71 60 chr15 54615228 54615578 -48879396 + L1MC4a LINE L1 6637 6990 -892 1 1001 7510 104 4 30 chr15 54615607 54617148 -48877826 + Lx LINE L1 5146 6648 -6 1 1001 293 293 24 0 chr15 54617353 54617435 -48877539 + MLT1F1 LTR MaLR 12 95 -474 1 1001 241 160 20 0 chr15 54617673 54617723 -48877251 + L1MC4a LINE L1 7831 7881 -1 1 1001 567 290 70 54 chr15 54617725 54618112 -48876862 + L1ME2 LINE L1 5772 6164 0 1 1001 213 389 58 44 chr15 54619195 54619221 -48875753 + B1_Mur4 SINE Alu 1 27 -123 1 1001 3508 46 5 0 chr15 54619221 54619615 -48875359 - MTA_Mm LTR MaLR 0 396 1 1 1001 373 309 64 0 chr15 54619615 54619725 -48875249 + B1F SINE Alu 22 138 -11 1 1001 276 360 0 0 chr15 54619738 54619813 -48875161 + ID4 SINE ID 6 80 -3 1 1001 424 126 45 26 chr15 54619814 54619969 -48875005 + (CA)n Simple_repeat Simple_repeat 2 159 0 1 1001 1398 251 49 88 chr15 54619973 54620072 -48874902 - L1_Rod LINE L1 -4057 1790 1724 1 1001 1014 103 0 29 chr15 54620072 54620212 -48874762 - B1_Mur4 SINE Alu -14 136 1 1 1001 1398 251 49 88 chr15 54620212 54620702 -48874272 - L1_Rod LINE L1 -4124 1723 1224 1 1001 240 122 0 0 chr15 54620703 54620744 -48874230 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1001 580 253 71 26 chr15 54620745 54620899 -48874075 - RSINE1 SINE B4 0 165 5 1 1001 265 252 84 0 chr15 54620922 54621029 -48873945 - L1MC4 LINE L1 -155 7887 7772 1 1001 396 71 0 0 chr15 54621825 54621881 -48873093 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1001 2174 126 70 3 chr15 54621881 54622239 -48872735 + MTB_Mm LTR MaLR 26 407 0 1 1001 276 111 0 0 chr15 54623773 54623818 -48871156 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1001 204 305 0 99 chr15 54623963 54624054 -48870920 + MIRb SINE MIR 34 115 -153 1 1001 244 162 0 0 chr15 54624378 54624415 -48870559 - RLTR33 LTR ERVK -1 677 641 2 1001 1750 106 221 15 chr15 54624416 54624742 -48870232 - RLTR33 LTR ERVK -284 394 2 2 1001 2073 274 111 13 chr15 54625058 54625672 -48869302 - Lx8 LINE L1 -428 7045 6372 2 1001 459 0 0 0 chr15 54625895 54625946 -48869028 + (TC)n Simple_repeat Simple_repeat 1 51 0 2 1001 481 316 92 9 chr15 54626575 54626802 -48868172 - L1MB1 LINE L1 -28 6161 5916 2 1001 324 230 94 34 chr15 54626797 54626914 -48868060 + L1MB5 LINE L1 5730 5853 -321 2 1001 724 339 71 51 chr15 54626921 54627316 -48867658 + MLT1A1 LTR MaLR 3 405 -3 2 1001 297 0 0 0 chr15 54627534 54627567 -48867407 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1001 1230 256 35 69 chr15 54627607 54628016 -48866958 - MTE2b LTR MaLR -15 364 1 2 1001 209 33 33 0 chr15 54628229 54628259 -48866715 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 2 1001 28 29 0 0 chr15 54628560 54628595 -48866379 + AT_rich Low_complexity Low_complexity 1 35 0 2 1001 327 304 0 0 chr15 54628774 54628886 -48866088 - L1MA4A LINE L1 -377 5926 5815 2 1001 387 0 0 0 chr15 54629899 54629942 -48865032 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1001 4246 206 92 36 chr15 54630169 54631415 -48863559 - RMER1A Other Other -1 1029 23 2 1001 28 0 0 0 chr15 54631674 54631702 -48863272 + AT_rich Low_complexity Low_complexity 1 28 0 2 1001 309 342 42 95 chr15 54631730 54631898 -48863076 + RSINE1 SINE B4 2 160 -5 2 1001 904 114 13 0 chr15 54631898 54632047 -48862927 + (GAA)n Simple_repeat Simple_repeat 3 153 0 2 1001 434 18 18 0 chr15 54632062 54632117 -48862857 + (GAGAA)n Simple_repeat Simple_repeat 5 60 0 2 1001 262 274 0 61 chr15 54632126 54632192 -48862782 + B4A SINE B4 84 145 -147 2 1001 390 250 38 57 chr15 54632144 54632250 -48862724 + B1F SINE Alu 13 116 -1 2 1001 586 95 0 21 chr15 54632250 54632347 -48862627 + (GAAA)n Simple_repeat Simple_repeat 1 95 0 2 1001 746 243 0 13 chr15 54632351 54632501 -48862473 + B1_Mur1 SINE Alu 1 148 -1 2 1001 204 125 0 0 chr15 54633029 54633061 -48861913 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 2 1001 324 0 0 0 chr15 54633061 54633097 -48861877 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1001 25 0 0 0 chr15 54633315 54633340 -48861634 + AT_rich Low_complexity Low_complexity 1 25 0 2 1001 6108 168 51 17 chr15 54633347 54634426 -48860548 - Lx5 LINE L1 -12 7038 5923 2 1001 2233 95 87 3 chr15 54634426 54634832 -48860142 + Lx5 LINE L1 5508 5947 -1103 2 1001 25 31 0 0 chr15 54635048 54635080 -48859894 + AT_rich Low_complexity Low_complexity 1 32 0 2 1001 946 136 6 6 chr15 54635169 54635339 -48859635 + (GGA)n Simple_repeat Simple_repeat 2 171 0 2 1001 475 196 98 0 chr15 54635613 54635715 -48859259 - B1_Mur1 SINE Alu -31 118 7 2 1001 246 32 0 0 chr15 54635801 54635832 -48859142 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1001 372 320 23 23 chr15 54635896 54636027 -48858947 - B1F1 SINE Alu -9 140 10 2 1001 21 0 0 0 chr15 54636062 54636083 -48858891 + AT_rich Low_complexity Low_complexity 1 21 0 2 1001 228 297 68 38 chr15 54636582 54636715 -48858259 + MIR SINE MIR 107 243 -19 2 1001 555 16 0 0 chr15 54637003 54637067 -48857907 + (CA)n Simple_repeat Simple_repeat 2 65 0 2 1001 541 335 32 41 chr15 54637403 54637624 -48857350 - ID_B1 SINE B4 -3 221 3 2 1001 243 0 0 0 chr15 54638164 54638191 -48856783 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1001 306 0 0 0 chr15 54638429 54638463 -48856511 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1001 366 61 0 0 chr15 54640110 54640159 -48854815 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1001 511 307 81 41 chr15 54640192 54640389 -48854585 - B4A SINE B4 -86 206 2 2 1001 225 0 0 0 chr15 54640405 54640430 -48854544 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1001 236 316 76 0 chr15 54640468 54640484 -48854490 + B4 SINE B4 56 76 -216 2 1001 240 35 0 0 chr15 54640484 54640513 -48854461 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1001 236 316 76 0 chr15 54640513 54640575 -48854399 + B4 SINE B4 77 139 -153 2 1001 342 0 0 0 chr15 54640674 54640712 -48854262 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1001 1122 317 11 0 chr15 54643501 54643785 -48851189 - B4A SINE B4 -4 288 2 2 1001 776 93 17 0 chr15 54644216 54644334 -48850640 + (GAAA)n Simple_repeat Simple_repeat 3 122 0 2 1001 590 119 263 0 chr15 54644887 54645005 -48849969 - B2_Mm2 SINE B2 0 195 47 2 1001 1167 117 0 0 chr15 54645430 54645610 -48849364 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2 1001 22 35 0 0 chr15 54646439 54646468 -48848506 + AT_rich Low_complexity Low_complexity 1 29 0 2 1001 2539 227 123 55 chr15 54646468 54646575 -48848399 - Lx7 LINE L1 0 7696 7575 2 1001 303 28 0 0 chr15 54646575 54646611 -48848363 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 1001 2539 227 123 55 chr15 54646611 54646789 -48848185 - Lx7 LINE L1 -122 7574 7354 2 1001 3238 73 2 8 chr15 54646789 54647187 -48847787 + MTA_Mm LTR MaLR 1 396 0 2 1001 2539 227 123 55 chr15 54647187 54647720 -48847254 - Lx7 LINE L1 -343 7353 6822 2 1001 269 360 45 89 chr15 54648003 54648250 -48846724 + MIRc SINE MIR 26 261 -7 2 1001 1026 265 5 0 chr15 54649522 54649733 -48845241 - B3 SINE B2 -4 212 1 2 1001 1063 49 0 118 chr15 54650233 54650394 -48844580 - L1_Mus2 LINE L1 0 6566 6425 2 1001 387 130 0 0 chr15 54650494 54650571 -48844403 + (GA)n Simple_repeat Simple_repeat 2 78 0 2 1001 1143 68 0 0 chr15 54650619 54650781 -48844193 + (TAGA)n Simple_repeat Simple_repeat 1 162 0 2 1001 189 0 0 0 chr15 54650792 54650813 -48844161 + (GA)n Simple_repeat Simple_repeat 2 22 0 2 1001 523 188 48 71 chr15 54650836 54650962 -48844012 + B3 SINE B2 93 215 -1 2 1001 224 288 34 0 chr15 54651756 54651815 -48843159 - B3A SINE B2 -105 93 33 2 1001 803 332 49 26 chr15 54653266 54653612 -48841362 + ORR1E LTR MaLR 6 359 0 2 1001 218 97 0 0 chr15 54653708 54653739 -48841235 + B2_Mm2 SINE B2 12 42 -153 2 1001 5090 61 3 47 chr15 54653740 54653810 -48841164 - L1_Mm LINE L1 -576 5307 5268 2 1001 1555 34 79 0 chr15 54653810 54653988 -48840986 - B2_Mm1a SINE B2 0 193 2 2 1001 5090 61 3 47 chr15 54653988 54654620 -48840354 - L1Md_F2 LINE L1 -616 5267 4636 2 1001 1778 76 0 0 chr15 54654619 54654842 -48840132 + L1Md_F2 LINE L1 5363 5585 -298 2 1001 8449 62 1 3 chr15 54654843 54655839 -48839135 + L1Md_F2 LINE L1 5587 6580 -2 2 1001 23 33 0 0 chr15 54655840 54655870 -48839104 + AT_rich Low_complexity Low_complexity 1 30 0 2 1001 416 111 16 0 chr15 54655900 54655963 -48839011 + B2_Mm2 SINE B2 27 90 -105 2 1001 629 226 0 9 chr15 54656316 54656432 -48838542 - B1_Mur1 SINE Alu -1 148 34 2 125 5975 70 4 8 chr15 54656621 54657806 -48837168 - L1_Mus3 LINE L1 -323 6315 5137 2 1002 2012 100 55 3 chr15 54657807 54658097 -48836877 + L1_Mus3 LINE L1 6330 6634 -4 2 1002 1212 106 0 0 chr15 54658124 54658303 -48836671 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 2 1002 192 77 0 0 chr15 54658303 54658329 -48836645 + (GAAAA)n Simple_repeat Simple_repeat 1 26 0 2 1002 350 266 0 0 chr15 54658944 54659023 -48835951 - B1F SINE Alu -3 146 68 2 1002 678 159 0 0 chr15 54659082 54659195 -48835779 + Lx3C LINE L1 6862 6974 -2 2 1002 210 118 0 0 chr15 54659216 54659250 -48835724 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 1002 262 270 0 0 chr15 54659397 54659460 -48835514 + (CATA)n Simple_repeat Simple_repeat 1 63 0 2 1002 287 203 14 0 chr15 54659586 54659660 -48835314 + (TA)n Simple_repeat Simple_repeat 2 76 0 2 1002 270 264 106 28 chr15 54659682 54659861 -48835113 - L1M4 LINE L1 -527 5657 5465 2 1002 424 253 176 13 chr15 54659885 54660052 -48834922 + MER58A DNA MER1_type 49 338 -3 2 1002 1239 29 0 0 chr15 54660071 54660208 -48834766 + B1_Mm SINE Alu 1 137 -10 2 1002 461 32 0 16 chr15 54660208 54660272 -48834702 + (CAAAA)n Simple_repeat Simple_repeat 2 64 0 2 1002 265 306 223 83 chr15 54660946 54661103 -48833871 + B4A SINE B4 48 226 -66 2 1002 329 198 9 0 chr15 54661919 54662025 -48832949 + CT-rich Low_complexity Low_complexity 1 107 0 2 1002 618 258 36 36 chr15 54662030 54662223 -48832751 - B3A SINE B2 -4 194 2 2 1002 769 182 7 7 chr15 54662532 54662670 -48832304 + MT2A LTR ERVL 1 138 -395 2 1002 451 311 14 80 chr15 54662920 54663133 -48831841 + B4A SINE B4 91 289 -3 2 1002 188 163 0 23 chr15 54663159 54663203 -48831771 + (CATA)n Simple_repeat Simple_repeat 4 46 0 2 1002 588 216 280 67 chr15 54663398 54663755 -48831219 + L1ME1 LINE L1 1298 1765 -4650 2 1002 295 315 86 56 chr15 54663835 54664104 -48830870 + L1ME1 LINE L1 4767 5043 -1276 2 1002 418 306 168 32 chr15 54664138 54664480 -48830494 + Lx8 LINE L1 6939 7327 -146 2 1002 254 317 28 59 chr15 54664588 54664843 -48830131 + L1ME1 LINE L1 5082 5328 -991 2 1002 1258 146 0 11 chr15 54664875 54665062 -48829912 + B2_Mm2 SINE B2 1 185 -10 2 1002 5629 44 0 0 chr15 54665172 54665805 -48829169 - L1Md_F2 LINE L1 -2 6580 5948 2 1002 1030 298 67 50 chr15 54665861 54665951 -48829023 + L1ME1 LINE L1 5511 5600 -752 2 1002 613 243 26 59 chr15 54665951 54666104 -48828870 + B1F2 SINE Alu 2 149 0 2 1002 1030 300 67 50 chr15 54666104 54666627 -48828347 + L1ME1 LINE L1 5601 6133 -484 2 1002 818 237 252 51 chr15 54666719 54667053 -48827921 - MTD LTR MaLR 0 419 19 2 1002 244 277 21 11 chr15 54667118 54667213 -48827761 + L1MA10 LINE L1 6229 6324 -10 2 1002 380 301 7 22 chr15 54667228 54667367 -48827607 + GA-rich Low_complexity Low_complexity 1 137 0 2 1002 236 338 99 43 chr15 54668649 54668923 -48826051 + L2a LINE L2 3036 3364 -62 2 1002 23 0 0 0 chr15 54669497 54669520 -48825454 + AT_rich Low_complexity Low_complexity 1 23 0 2 1002 189 0 0 0 chr15 54669854 54669875 -48825099 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 2 1002 967 136 41 6 chr15 54669875 54670045 -48824929 - B2_Mm2 SINE B2 -19 176 1 2 1002 869 249 36 5 chr15 54673113 54673307 -48821667 - B3 SINE B2 -1 215 16 2 1002 23 0 0 0 chr15 54675087 54675110 -48819864 + AT_rich Low_complexity Low_complexity 1 23 0 2 1002 951 251 10 0 chr15 54675110 54675317 -48819657 - B3 SINE B2 -7 209 1 2 1002 288 102 0 0 chr15 54675702 54675751 -48819223 + (GA)n Simple_repeat Simple_repeat 2 50 0 2 1002 369 0 0 0 chr15 54679656 54679697 -48815277 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1002 544 253 7 0 chr15 54680110 54680243 -48814731 + B4 SINE B4 108 245 -47 2 1002 301 348 0 9 chr15 54680290 54680406 -48814568 + (CA)n Simple_repeat Simple_repeat 2 116 0 3 1002 911 51 8 0 chr15 54680623 54680740 -48814234 - B1_Mus1 SINE Alu 0 148 31 3 1002 22 0 0 0 chr15 54680745 54680767 -48814207 + AT_rich Low_complexity Low_complexity 1 22 0 3 1002 761 238 82 5 chr15 54680775 54680969 -48814005 + B3 SINE B2 2 210 -6 3 1002 426 328 32 0 chr15 54681273 54681398 -48813576 + RSINE1 SINE B4 21 149 -16 3 1002 258 32 0 0 chr15 54681399 54681430 -48813544 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1002 1865 150 7 106 chr15 54683050 54683476 -48811498 + ORR1C2 LTR MaLR 1 384 0 3 1002 1146 285 25 3 chr15 54683836 54684118 -48810856 - B4A SINE B4 -4 288 1 3 1002 223 296 71 36 chr15 54684176 54684260 -48810714 - L2b LINE L2 -38 3337 3251 3 1002 21 0 0 0 chr15 54685245 54685266 -48809708 + AT_rich Low_complexity Low_complexity 1 21 0 3 1002 416 272 65 62 chr15 54685271 54685549 -48809425 - L1MA4 LINE L1 -6 6294 6016 3 1002 261 0 0 0 chr15 54685560 54685589 -48809385 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1002 534 300 109 95 chr15 54685615 54685899 -48809075 - B4A SINE B4 -4 288 1 3 1002 224 30 30 0 chr15 54687237 54687270 -48807704 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1002 189 175 0 0 chr15 54688547 54688587 -48806387 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1002 648 292 93 52 chr15 54688891 54689234 -48805740 + ORR1E LTR MaLR 1 357 -2 3 1002 700 228 0 39 chr15 54690321 54690476 -48804498 + B1_Mur2 SINE Alu 1 149 0 3 1002 898 203 128 0 chr15 54691346 54691533 -48803441 - B3 SINE B2 -5 211 1 3 1002 231 209 101 29 chr15 54691658 54691727 -48803247 + RMER4A LTR ERVK 309 382 -84 3 1002 236 255 0 18 chr15 54692438 54692494 -48802480 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 1002 202 53 105 0 chr15 54693211 54693249 -48801725 + T-rich Low_complexity Low_complexity 5 46 0 3 1002 403 326 47 0 chr15 54693282 54693411 -48801563 + LTR33 LTR ERVL 32 166 -349 3 1002 218 167 0 0 chr15 54693487 54693523 -48801451 + CT-rich Low_complexity Low_complexity 2 37 0 3 1002 237 310 25 50 chr15 54693830 54693949 -48801025 - MER3 DNA MER1_type 0 209 94 3 1002 468 35 0 0 chr15 54697288 54697346 -48797628 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 1002 396 0 0 0 chr15 54698835 54698879 -48796095 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1002 270 0 0 0 chr15 54699100 54699130 -48795844 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1002 378 0 0 0 chr15 54699130 54699171 -48795803 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 1002 1073 102 205 21 chr15 54699577 54699767 -48795207 - URR1A DNA MER1_type -1 225 1 3 1002 489 306 14 0 chr15 54699929 54700076 -48794898 + RSINE1 SINE B4 4 152 -13 3 1002 322 292 80 45 chr15 54700146 54700303 -48794671 + MIR SINE MIR 38 197 -71 3 1002 25 0 0 0 chr15 54700378 54700403 -48794571 + AT_rich Low_complexity Low_complexity 1 25 0 3 1002 620 296 7 7 chr15 54702200 54702346 -48792628 + RSINE1 SINE B4 3 148 -17 3 1002 378 0 0 0 chr15 54702347 54702389 -48792585 + (TC)n Simple_repeat Simple_repeat 2 43 0 3 1002 645 209 29 43 chr15 54702546 54702686 -48792288 + B3A SINE B2 1 138 -60 3 1002 189 0 0 0 chr15 54702686 54702707 -48792267 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1002 624 275 53 0 chr15 54703466 54703637 -48791337 + Tigger7 DNA MER2_type 2311 2490 -1 3 1002 497 291 60 0 chr15 54703846 54703980 -48790994 - RSINE1 SINE B4 -21 144 3 3 1002 450 0 0 0 chr15 54705102 54705152 -48789822 + (TC)n Simple_repeat Simple_repeat 2 51 0 3 1002 2346 277 52 50 chr15 54705152 54705521 -48789453 + Lx8 LINE L1 6470 6844 -629 3 1002 351 0 0 0 chr15 54705521 54705560 -48789414 + (TTTG)n Simple_repeat Simple_repeat 3 41 0 3 1002 2346 277 52 50 chr15 54705560 54706122 -48788852 + Lx8 LINE L1 6845 7402 -71 3 1002 290 287 45 11 chr15 54706286 54706374 -48788600 + B1F1 SINE Alu 6 96 -53 3 1002 480 165 0 0 chr15 54706380 54706471 -48788503 + GA-rich Low_complexity Low_complexity 4 94 0 3 1002 725 191 99 0 chr15 54707033 54707164 -48787810 - B1_Mur4 SINE Alu -1 149 6 3 1002 306 0 0 0 chr15 54707728 54707762 -48787212 + (GA)n Simple_repeat Simple_repeat 2 35 0 3 1002 216 0 0 0 chr15 54711029 54711053 -48783921 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1002 29 0 0 0 chr15 54712339 54712368 -48782606 + AT_rich Low_complexity Low_complexity 1 29 0 3 1002 369 266 55 9 chr15 54715561 54715671 -48779303 + MIR SINE MIR 146 260 -2 3 1002 783 278 57 52 chr15 54715671 54716020 -48778954 + Lx8 LINE L1 7121 7471 -2 3 1002 423 0 0 0 chr15 54716611 54716658 -48778316 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 1002 1404 63 0 6 chr15 54716790 54716966 -48778008 + B2_Mm2 SINE B2 2 176 -19 3 1002 368 67 0 0 chr15 54717031 54717091 -48777883 + B2_Mm1t SINE B2 128 187 -6 3 1002 327 346 71 6 chr15 54717091 54717274 -48777700 - MIRb SINE MIR -11 257 63 3 1002 27 0 0 0 chr15 54717477 54717504 -48777470 + AT_rich Low_complexity Low_complexity 1 27 0 3 1002 561 142 9 17 chr15 54718779 54718894 -48776080 + G-rich Low_complexity Low_complexity 3 116 0 3 1002 240 256 20 0 chr15 54719824 54719882 -48775092 + B1F1 SINE Alu 13 76 -51 3 1002 204 395 63 31 chr15 54720008 54720199 -48774775 + MIR SINE MIR 47 243 -19 3 1002 291 28 0 0 chr15 54721570 54721606 -48773368 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 3 1002 316 320 13 0 chr15 54722025 54722100 -48772874 + PB1D10 SINE Alu 1 76 -41 3 1002 210 109 0 164 chr15 54722106 54722161 -48772813 + A-rich Low_complexity Low_complexity 1 46 0 3 1002 351 44 0 0 chr15 54722323 54722368 -48772606 + (A)n Simple_repeat Simple_repeat 1 45 0 3 1002 6006 2 0 0 chr15 54723334 54723956 -48771018 + L1Md_A LINE L1 5961 6582 0 3 1002 216 97 0 0 chr15 54724320 54724351 -48770623 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 3 1002 395 253 10 21 chr15 54724460 54724557 -48770417 - PB1D10 SINE Alu 0 117 22 3 1002 389 208 0 14 chr15 54724603 54724676 -48770298 - BC1_Mm scRNA scRNA -79 73 2 3 1002 234 0 0 0 chr15 54724703 54724729 -48770245 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1002 441 0 0 0 chr15 54724988 54725037 -48769937 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1002 2966 76 15 2 chr15 54725038 54725434 -48769540 - L1_Mus4 LINE L1 -23 6613 6213 3 1002 2284 182 5 29 chr15 54725434 54725842 -48769132 + MTC LTR MaLR 5 402 -19 3 1002 1216 96 135 48 chr15 54725973 54726181 -48768793 - URR1A DNA MER1_type 0 226 1 3 1002 333 250 15 0 chr15 54726203 54726271 -48768703 + ID4_ SINE ID 4 72 -11 3 1002 183 80 0 0 chr15 54728055 54728080 -48766894 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1002 411 228 13 7 chr15 54728968 54729118 -48765856 + (TA)n Simple_repeat Simple_repeat 1 151 0 3 1002 391 242 84 0 chr15 54730039 54730134 -48764840 + RSINE1 SINE B4 56 158 -7 3 1002 180 111 0 0 chr15 54730190 54730217 -48764757 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 3 1002 29 0 0 0 chr15 54730331 54730360 -48764614 + AT_rich Low_complexity Low_complexity 1 29 0 3 1002 255 132 44 0 chr15 54730666 54730734 -48764240 + GA-rich Low_complexity Low_complexity 4 74 0 3 1002 440 48 16 0 chr15 54731174 54731237 -48763737 + (TAAA)n Simple_repeat Simple_repeat 3 66 0 3 1002 545 215 27 27 chr15 54731412 54731522 -48763452 - B1_Mur2 SINE Alu -39 110 1 3 1002 214 127 17 52 chr15 54732027 54732085 -48762889 + (TAAA)n Simple_repeat Simple_repeat 3 58 0 3 1002 627 255 19 56 chr15 54732512 54732674 -48762300 + RSINE1 SINE B4 3 158 -7 3 1002 288 0 0 0 chr15 54732677 54732709 -48762265 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1002 598 267 46 46 chr15 54733535 54733588 -48761386 - B4A SINE B4 -12 280 231 3 1002 2541 128 70 5 chr15 54733588 54733958 -48761016 + ORR1B1 LTR MaLR 1 394 0 3 1002 598 269 221 35 chr15 54733958 54734119 -48760855 - B4A SINE B4 -62 230 36 3 1002 1164 82 0 14 chr15 54735036 54735184 -48759790 + B1_Mus1 SINE Alu 2 147 -1 3 1002 477 0 0 0 chr15 54735187 54735240 -48759734 + (TAA)n Simple_repeat Simple_repeat 2 54 0 3 1002 952 153 152 5 chr15 54735241 54735425 -48759549 - B3 SINE B2 0 216 6 3 1002 183 388 17 25 chr15 54735426 54735545 -48759429 + L4 LINE RTE 1598 1715 -314 3 1002 200 220 10 62 chr15 54735745 54735842 -48759132 + (TA)n Simple_repeat Simple_repeat 1 92 0 3 1002 946 270 38 23 chr15 54736007 54736269 -48758705 - MTE2a LTR MaLR -6 373 108 3 1002 556 277 7 14 chr15 54736300 54736443 -48758531 + Lx8 LINE L1 6973 7114 -359 3 1002 180 0 0 0 chr15 54736686 54736706 -48758268 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1002 1314 39 0 0 chr15 54736723 54736877 -48758097 - L1Md_A LINE L1 0 6582 6429 3 1002 916 137 139 30 chr15 54736906 54737072 -48757902 + B2_Mm2 SINE B2 1 184 -11 3 1002 561 30 0 0 chr15 54737072 54737139 -48757835 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 3 1002 838 249 48 24 chr15 54737152 54737358 -48757616 + B3 SINE B2 1 211 -5 3 1002 311 303 0 99 chr15 54737389 54737510 -48757464 - MTE2a LTR MaLR -262 117 9 3 1002 248 269 78 69 chr15 54737545 54737661 -48757313 + LTR16A1 LTR ERVL 340 456 0 3 1002 334 72 0 35 chr15 54737765 54737823 -48757151 + L1Md_F2 LINE L1 6525 6580 -2 3 1002 241 219 0 0 chr15 54737853 54737894 -48757080 + B3A SINE B2 1 41 -157 3 1002 1247 68 0 0 chr15 54737894 54738040 -48756934 + B1_Mus1 SINE Alu 2 147 -1 3 1002 903 239 6 29 chr15 54738041 54738252 -48756722 + B3 SINE B2 11 216 0 3 1002 4191 56 12 18 chr15 54738796 54739301 -48755673 + L1_Mus1 LINE L1 6066 6567 0 4 1002 415 308 83 42 chr15 54741837 54742054 -48752920 + MIRb SINE MIR 40 265 -3 4 1002 29 28 0 0 chr15 54742204 54742240 -48752734 + AT_rich Low_complexity Low_complexity 1 36 0 4 1002 750 281 12 6 chr15 54742248 54742409 -48752565 + B3A SINE B2 9 170 -28 4 1002 317 145 0 16 chr15 54742441 54742504 -48752470 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 1002 187 164 16 16 chr15 54743010 54743072 -48751902 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 1002 510 17 0 0 chr15 54744318 54744377 -48750597 + (GA)n Simple_repeat Simple_repeat 1 59 0 4 1002 807 201 14 0 chr15 54744378 54744522 -48750452 + B1_Mur2 SINE Alu 4 149 0 4 1002 213 352 0 53 chr15 54744820 54744895 -48750079 - RSINE1 SINE B4 -6 159 89 4 1002 495 113 0 0 chr15 54745309 54745380 -48749594 + B2_Mm2 SINE B2 3 73 -122 4 1002 246 81 0 0 chr15 54745711 54745748 -48749226 + (CAGAGA)n Simple_repeat Simple_repeat 6 42 0 4 1002 306 127 225 0 chr15 54746264 54746406 -48748568 + (CTCCG)n Simple_repeat Simple_repeat 5 178 0 4 1002 225 0 0 0 chr15 54746659 54746684 -48748290 + (G)n Simple_repeat Simple_repeat 1 25 0 4 1002 363 242 110 0 chr15 54747262 54747353 -48747621 - PB1D7 SINE Alu -10 110 10 4 1002 1253 169 86 8 chr15 54747515 54747530 -48747444 + Lx7 LINE L1 7408 7429 -267 4 1002 342 0 0 0 chr15 54747530 54747568 -48747406 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1002 1253 169 86 8 chr15 54747568 54747820 -48747154 + Lx7 LINE L1 7430 7695 -1 4 1002 324 0 0 0 chr15 54749097 54749133 -48745841 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 4 1002 23 0 0 0 chr15 54749793 54749816 -48745158 + AT_rich Low_complexity Low_complexity 1 23 0 4 1002 299 239 0 21 chr15 54753540 54753634 -48741340 + (CATATA)n Simple_repeat Simple_repeat 5 96 0 4 1002 471 253 89 41 chr15 54753732 54753901 -48741073 - B4A SINE B4 -1 291 115 4 1002 253 361 118 48 chr15 54755501 54756090 -48738884 - L2b LINE L2 -1 3374 2747 4 1002 1804 26 0 0 chr15 54756229 54756422 -48738552 - B2_Mm1t SINE B2 0 193 1 4 1002 439 271 196 62 chr15 54756560 54756800 -48738174 + B4 SINE B4 4 275 -17 4 1002 351 0 0 0 chr15 54756840 54756879 -48738095 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1002 858 126 0 0 chr15 54756912 54757047 -48737927 + (GAAA)n Simple_repeat Simple_repeat 2 136 0 4 1002 711 0 0 0 chr15 54757048 54757127 -48737847 + (GGAAA)n Simple_repeat Simple_repeat 1 79 0 4 1002 197 33 33 0 chr15 54757583 54757613 -48737361 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 1002 920 174 0 0 chr15 54757615 54757753 -48737221 - B1_Mur2 SINE Alu -11 138 1 4 1002 378 0 0 0 chr15 54757803 54757845 -48737129 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1002 764 236 14 0 chr15 54757846 54757986 -48736988 - RSINE1 SINE B4 -22 143 2 4 1002 354 330 9 9 chr15 54758603 54758716 -48736258 + MER5A DNA MER1_type 2 114 -75 4 1002 194 313 192 70 chr15 54758806 54759019 -48735955 + MIR SINE MIR 18 256 -6 4 1002 2182 94 61 44 chr15 54760226 54760570 -48734404 + Lx LINE L1 6300 6649 -5 4 1002 374 183 10 79 chr15 54761150 54761251 -48733723 + L1M4 LINE L1 4020 4113 -2033 4 1002 2832 158 54 24 chr15 54761569 54762070 -48732904 - RMER20A LTR ERVK 0 516 1 4 1002 393 22 0 0 chr15 54762078 54762124 -48732850 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1002 423 92 0 0 chr15 54762217 54762282 -48732692 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1002 686 176 80 14 chr15 54763805 54763943 -48731031 + B1_Mur1 SINE Alu 1 147 -2 4 1002 699 192 16 8 chr15 54764245 54764366 -48730608 + B3 SINE B2 1 122 -94 4 1002 450 0 0 0 chr15 54764396 54764446 -48730528 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1002 321 356 11 17 chr15 54765295 54765472 -48729502 + MIR SINE MIR 46 221 -41 4 1002 400 230 26 30 chr15 54765581 54765703 -48729271 - MIRb SINE MIR -141 127 1 4 1002 186 195 98 0 chr15 54766532 54766573 -48728401 - MIRc SINE MIR -154 114 70 4 1002 260 275 50 95 chr15 54766657 54766820 -48728154 - MIR SINE MIR -111 157 8 4 1002 928 292 39 31 chr15 54767519 54767987 -48726987 + Lx7 LINE L1 7071 7680 -16 4 1002 260 63 62 16 chr15 54768024 54768088 -48726886 + (TAAAA)n Simple_repeat Simple_repeat 2 68 0 4 1002 193 224 159 29 chr15 54768150 54768219 -48726755 + L2a LINE L2 3092 3169 -257 4 1002 201 363 10 62 chr15 54768305 54768402 -48726572 + MIRm SINE MIR 185 276 0 4 1002 1624 226 45 8 chr15 54768512 54768869 -48726105 + ORR1D2 LTR MaLR 1 370 0 4 1002 757 260 207 26 chr15 54769207 54769407 -48725567 + MTD LTR MaLR 1 216 -203 4 1002 881 228 68 19 chr15 54769407 54769613 -48725361 + B3 SINE B2 1 216 0 4 1002 757 265 193 25 chr15 54769613 54769768 -48725206 + MTD LTR MaLR 217 405 -14 4 1002 533 184 155 0 chr15 54770237 54770340 -48724634 + B3 SINE B2 92 210 -6 4 1002 22 35 0 0 chr15 54770341 54770370 -48724604 + AT_rich Low_complexity Low_complexity 1 29 0 4 1002 181 286 107 0 chr15 54770526 54770582 -48724392 - MIR SINE MIR -186 76 15 4 1002 1422 99 16 10 chr15 54770876 54771069 -48723905 + B2_Mm2 SINE B2 2 195 0 4 1002 209 283 0 54 chr15 54771135 54771191 -48723783 + MER5A DNA MER1_type 19 71 -118 4 1002 1310 47 0 0 chr15 54771194 54771342 -48723632 + B1_Mus1 SINE Alu 1 148 0 4 1002 1110 228 10 0 chr15 54771472 54771678 -48723296 - B3 SINE B2 -7 209 2 4 1002 242 368 8 41 chr15 54771703 54771825 -48723149 - PB1D7 SINE Alu -1 119 2 4 1002 26 50 0 0 chr15 54771852 54771892 -48723082 + AT_rich Low_complexity Low_complexity 1 40 0 4 1002 599 290 31 25 chr15 54772002 54772161 -48722813 - ID_B1 SINE B4 -13 211 52 4 1002 261 0 0 0 chr15 54772206 54772235 -48722739 + (A)n Simple_repeat Simple_repeat 1 29 0 4 1002 360 0 0 0 chr15 54772461 54772501 -48722473 + (TC)n Simple_repeat Simple_repeat 2 41 0 4 1002 567 0 0 0 chr15 54772501 54772563 -48722411 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1002 506 304 7 0 chr15 54772565 54772700 -48722274 - B3 SINE B2 -77 139 4 4 1002 1231 68 0 7 chr15 54773205 54773354 -48721620 + B1_Mus1 SINE Alu 1 148 0 4 1002 958 252 67 20 chr15 54774203 54774547 -48720427 + Lx8 LINE L1 6879 7238 -235 4 1002 872 183 0 11 chr15 54774556 54774738 -48720236 + CT-rich Low_complexity Low_complexity 1 180 0 4 1002 602 169 8 0 chr15 54774757 54774875 -48720099 + CT-rich Low_complexity Low_complexity 3 121 0 4 1002 1061 276 35 32 chr15 54775127 54775471 -48719503 - MLT1B LTR MaLR -45 345 1 4 1002 1155 50 43 0 chr15 54776177 54776317 -48718657 + B1_Mm SINE Alu 1 146 -1 4 1002 976 218 82 10 chr15 54776678 54776873 -48718101 - B3 SINE B2 -5 211 3 4 1002 31 0 0 0 chr15 54777007 54777038 -48717936 + AT_rich Low_complexity Low_complexity 1 31 0 4 1002 213 275 29 0 chr15 54777079 54777148 -48717826 + GA-rich Low_complexity Low_complexity 3 73 0 4 1002 510 17 0 0 chr15 54777457 54777516 -48717458 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 4 1002 909 103 79 0 chr15 54777516 54777642 -48717332 - B1_Mus2 SINE Alu -10 137 2 4 1002 1394 83 5 54 chr15 54777650 54777682 -48717292 - B2_Mm1t SINE B2 0 193 165 4 1002 198 0 0 0 chr15 54777682 54777704 -48717270 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 4 1002 1322 83 5 54 chr15 54777704 54777874 -48717100 - B2_Mm1a SINE B2 -29 164 1 4 1002 235 285 98 31 chr15 54777875 54778038 -48716936 - L3 LINE CR1 -196 4293 4120 4 1002 381 177 0 0 chr15 54778266 54778345 -48716629 + CT-rich Low_complexity Low_complexity 1 79 0 4 1002 280 252 17 0 chr15 54779283 54779356 -48715618 - MIRc SINE MIR -169 99 25 4 1002 273 264 58 83 chr15 54779534 54779654 -48715320 + Charlie4z DNA MER1_type 46 162 -5 4 1002 379 292 9 9 chr15 54780225 54780339 -48714635 + RSINE1 SINE B4 5 118 -47 4 1002 339 25 0 0 chr15 54780342 54780382 -48714592 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1002 782 259 47 21 chr15 54780430 54780623 -48714351 + ID_B1 SINE B4 9 206 -18 4 1002 482 163 37 0 chr15 54780635 54780770 -48714204 + G-rich Low_complexity Low_complexity 2 141 0 4 1002 687 153 23 14 chr15 54780781 54781140 -48713834 + G-rich Low_complexity Low_complexity 1 362 0 4 1002 276 259 12 24 chr15 54781142 54781225 -48713749 + GA-rich Low_complexity Low_complexity 3 84 0 4 1002 689 146 275 12 chr15 54781657 54781817 -48713157 + B3 SINE B2 1 202 -14 4 1002 653 254 34 28 chr15 54781979 54782157 -48712817 + MTEa LTR MaLR 27 205 -174 4 1002 300 137 0 0 chr15 54782163 54782214 -48712760 + (CCCCCA)n Simple_repeat Simple_repeat 5 55 0 4 1002 248 267 99 8 chr15 54782560 54782681 -48712293 - L2 LINE L2 -881 2538 2407 4 1002 414 0 0 0 chr15 54783474 54783520 -48711454 + (TAA)n Simple_repeat Simple_repeat 2 47 0 4 1002 405 153 0 40 chr15 54785280 54785355 -48709619 + PB1D7 SINE Alu 49 120 0 4 1002 738 34 0 0 chr15 54785903 54785992 -48708982 + (TTC)n Simple_repeat Simple_repeat 2 90 0 4 1002 23 0 0 0 chr15 54786046 54786069 -48708905 + GC_rich Low_complexity Low_complexity 1 23 0 4 125 6542 122 66 7 chr15 54787365 54788394 -48706580 - Lx LINE L1 -6 6991 5587 4 1003 6044 66 0 36 chr15 54788394 54789206 -48705768 - L1_Mus2 LINE L1 -1 6565 5783 4 1003 3056 252 97 68 chr15 54789206 54789328 -48705646 - Lx LINE L1 -1097 5900 5798 4 1003 1131 75 0 7 chr15 54789328 54789476 -48705498 - B1_Mus1 SINE Alu 0 148 2 4 1003 3056 118 1 1 chr15 54789476 54789717 -48705257 - Lx LINE L1 -1200 5797 5558 4 1003 189 0 0 0 chr15 54789720 54789741 -48705233 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 4 1003 1108 89 0 0 chr15 54789741 54789899 -48705075 - B2_Mm2 SINE B2 -36 159 2 4 1003 1583 235 58 43 chr15 54789894 54790409 -48704565 - RMER19C LTR ERVK -3 608 86 4 1003 431 18 18 0 chr15 54790558 54790614 -48704360 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 1003 606 237 0 0 chr15 54790900 54791031 -48703943 - ID_B1 SINE B4 -6 218 88 5 1003 477 0 0 0 chr15 54791182 54791235 -48703739 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1003 770 169 26 13 chr15 54791869 54792025 -48702949 - URR1B DNA MER1_type -3 222 65 5 1003 576 326 20 17 chr15 54792333 54792629 -48702345 - L1MB8 LINE L1 -1 6177 5881 5 1003 569 214 134 22 chr15 54793346 54793480 -48701494 + B1_Mur2 SINE Alu 1 149 0 5 1003 469 200 0 98 chr15 54794427 54794560 -48700414 + PB1D9 SINE Alu 1 120 0 5 1003 366 290 30 0 chr15 54795077 54795208 -48699766 + L1MA10 LINE L1 6192 6326 -8 5 1003 485 263 131 66 chr15 54796972 54797155 -48697819 - B3A SINE B2 -3 195 1 5 1003 180 0 0 0 chr15 54797517 54797537 -48697437 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1003 261 207 35 0 chr15 54797583 54797641 -48697333 - MTD LTR MaLR -128 291 232 5 1003 346 20 39 0 chr15 54798389 54798440 -48696534 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 5 1003 25 0 0 0 chr15 54798575 54798600 -48696374 + AT_rich Low_complexity Low_complexity 1 25 0 5 1003 469 356 73 7 chr15 54798616 54798766 -48696208 - RSINE1 SINE B4 -3 162 3 5 1003 591 285 23 74 chr15 54798766 54798966 -48696008 - B4A SINE B4 -61 231 43 5 1003 304 298 142 26 chr15 54799808 54799963 -48695011 + MIRb SINE MIR 9 181 -87 5 1003 827 232 90 35 chr15 54800370 54800571 -48694403 + B3 SINE B2 1 212 -4 5 1003 227 343 71 16 chr15 54800930 54801182 -48693792 - L1M5 LINE L1 -500 5624 5359 5 1003 219 36 0 0 chr15 54801352 54801380 -48693594 + (TCTG)n Simple_repeat Simple_repeat 3 30 0 5 1003 274 347 31 0 chr15 54801411 54801509 -48693465 - RSINE1 SINE B4 -24 141 41 5 1003 216 0 0 0 chr15 54802328 54802352 -48692622 + (ATTG)n Simple_repeat Simple_repeat 2 25 0 5 1003 225 0 0 0 chr15 54802540 54802565 -48692409 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 5 1003 1339 95 16 10 chr15 54802779 54802971 -48692003 - B2_Mm1t SINE B2 0 193 1 5 1003 21 0 0 0 chr15 54803309 54803330 -48691644 + AT_rich Low_complexity Low_complexity 1 21 0 5 1003 232 376 28 0 chr15 54803883 54803992 -48690982 + MLT1J LTR MaLR 86 197 -315 5 1003 522 215 92 8 chr15 54804018 54804149 -48690825 - B1F SINE Alu -7 142 1 5 1003 464 206 0 30 chr15 54804174 54804274 -48690700 - ID_B1 SINE B4 -42 182 86 5 1003 683 312 53 0 chr15 54804403 54804611 -48690363 + ID_B1 SINE B4 6 224 0 5 1003 556 310 78 4 chr15 54805169 54805399 -48689575 + B4A SINE B4 7 253 -39 5 1003 300 53 0 0 chr15 54805410 54805448 -48689526 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1003 395 267 48 48 chr15 54805467 54805593 -48689381 + ID_B1 SINE B4 95 220 -4 5 1003 417 70 0 0 chr15 54805836 54805893 -48689081 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 1003 238 283 93 89 chr15 54805907 54806155 -48688819 - RLTR11A LTR ERVK -53 475 227 5 1003 203 229 0 0 chr15 54806155 54806190 -48688784 + C-rich Low_complexity Low_complexity 1 35 0 5 1003 561 272 30 102 chr15 54806190 54806485 -48688489 - RLTR11A2 LTR ERVK -164 277 4 5 1003 533 15 15 0 chr15 54806488 54806554 -48688420 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 1003 1012 311 77 42 chr15 54806700 54807180 -48687794 - Lx8 LINE L1 -16 7457 6961 5 1003 324 0 0 0 chr15 54807189 54807225 -48687749 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 5 1003 486 315 96 5 chr15 54807225 54807415 -48687559 - B4A SINE B4 -76 216 9 5 1003 585 213 7 75 chr15 54807442 54807553 -48687421 + B1_Mus1 SINE Alu 6 116 -32 5 1003 192 40 0 0 chr15 54807553 54807578 -48687396 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 1003 585 213 7 75 chr15 54807578 54807613 -48687361 + B1_Mus1 SINE Alu 117 142 -6 5 1003 572 231 205 16 chr15 54808132 54808317 -48686657 - RMER21B LTR ERV1 -275 567 348 5 1003 4324 209 67 38 chr15 54808504 54809678 -48685296 - ORR1C2-int LTR MaLR -162 1208 1 5 1003 1649 158 87 84 chr15 54809680 54809863 -48685111 - ORR1C2 LTR MaLR -3 381 191 5 1003 587 51 13 0 chr15 54809863 54809942 -48685032 + (GA)n Simple_repeat Simple_repeat 2 81 0 5 1003 1649 158 87 84 chr15 54809942 54810138 -48684836 - ORR1C2 LTR MaLR -194 190 3 5 1003 1211 20 7 0 chr15 54810289 54810435 -48684539 + (TTC)n Simple_repeat Simple_repeat 1 147 0 5 1003 609 168 22 39 chr15 54810450 54810630 -48684344 + C-rich Low_complexity Low_complexity 4 180 0 5 1003 264 311 0 0 chr15 54810766 54810840 -48684134 - ID_B1 SINE B4 -128 96 23 5 1003 311 258 0 0 chr15 54810781 54810843 -48684131 - ID4_ SINE ID -3 80 19 5 1003 204 40 0 0 chr15 54811203 54811228 -48683746 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 5 1003 572 247 134 42 chr15 54811632 54811708 -48683266 - B4A SINE B4 -6 286 208 5 1003 315 0 0 0 chr15 54811708 54811743 -48683231 + (TC)n Simple_repeat Simple_repeat 1 35 0 5 1003 572 247 134 42 chr15 54811743 54811928 -48683046 - B4A SINE B4 -85 207 3 5 1003 640 272 49 0 chr15 54812015 54812199 -48682775 + B3 SINE B2 24 216 0 5 1003 601 129 0 0 chr15 54812344 54812437 -48682537 + B1_Mus2 SINE Alu 55 147 0 5 1003 403 289 96 0 chr15 54812444 54812610 -48682364 + MLT1B LTR MaLR 209 390 0 5 1003 218 221 29 0 chr15 54812717 54812785 -48682189 + GA-rich Low_complexity Low_complexity 2 71 0 5 1003 707 102 152 38 chr15 54813353 54813366 -48681608 - B1_Mm SINE Alu 0 147 137 5 1003 243 0 0 0 chr15 54813366 54813393 -48681581 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1003 707 102 152 38 chr15 54813393 54813511 -48681463 - B1_Mm SINE Alu -11 136 1 5 1003 2344 248 14 10 chr15 54813888 54814401 -48680573 + Lx6 LINE L1 6913 7427 -33 5 1003 183 80 0 0 chr15 54814404 54814429 -48680545 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 1003 185 368 73 10 chr15 54816434 54816530 -48678444 - MIRb SINE MIR -141 127 26 5 1003 1030 263 61 0 chr15 54816750 54817012 -48677962 + B4 SINE B4 8 285 -7 5 1003 219 139 0 0 chr15 54817059 54817095 -48677879 + (CAGG)n Simple_repeat Simple_repeat 3 38 0 5 1003 683 269 119 24 chr15 54817768 54818019 -48676955 - MTD LTR MaLR -140 279 5 5 1003 225 0 0 0 chr15 54819834 54819859 -48675115 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1003 472 287 40 17 chr15 54820301 54820478 -48674496 + Charlie1a DNA MER1_type 906 1086 -369 5 1003 186 43 0 0 chr15 54820822 54820845 -48674129 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1003 1603 138 0 38 chr15 54821925 54822188 -48672786 + Lx3C LINE L1 6717 6969 -7 5 1003 2831 120 40 15 chr15 54822267 54822723 -48672251 - Lx3B LINE L1 -22 6951 6485 5 1003 183 170 0 0 chr15 54822947 54822994 -48671980 + T-rich Low_complexity Low_complexity 1 47 0 5 1003 326 269 97 0 chr15 54823037 54823130 -48671844 - B1_Mur1 SINE Alu -41 108 7 5 1003 365 264 30 113 chr15 54823136 54823367 -48671607 - L1MB8 LINE L1 -230 6808 6597 5 1003 3752 135 36 6 chr15 54823391 54824053 -48670921 - RLTR17 LTR ERVK -10 682 1 5 1003 715 220 36 41 chr15 54824125 54824319 -48670655 - B2_Mm2 SINE B2 -2 193 1 5 1003 382 258 198 43 chr15 54824321 54824499 -48670475 - L1MB8 LINE L1 -493 6551 6339 5 1003 219 36 0 0 chr15 54824499 54824527 -48670447 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 5 1003 382 258 198 43 chr15 54824527 54824596 -48670378 - L1MB8 LINE L1 -706 6338 6258 5 1003 327 25 0 0 chr15 54824596 54824636 -48670338 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1003 927 247 136 21 chr15 54824636 54825095 -48669879 - L1MB8 LINE L1 -787 6257 5737 5 1003 413 282 52 37 chr15 54825078 54825347 -48669627 - L1MB8 LINE L1 -1988 5018 4746 5 1003 503 51 190 0 chr15 54825364 54825443 -48669531 - BC1_Mm scRNA scRNA -58 94 1 5 1003 566 308 25 84 chr15 54825444 54825646 -48669328 - L1MB8 LINE L1 -2296 4710 4525 5 1003 474 18 0 0 chr15 54825646 54825701 -48669273 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1003 566 308 25 84 chr15 54825701 54825810 -48669164 - L1MB8 LINE L1 -2482 4524 4421 5 1003 789 172 7 0 chr15 54825810 54825955 -48669019 + B1_Mur3 SINE Alu 3 148 -1 5 1003 566 308 25 84 chr15 54825955 54826036 -48668938 - L1MB8 LINE L1 -2586 4420 4340 5 1003 399 254 31 23 chr15 54826100 54826229 -48668745 - B1F1 SINE Alu -12 137 8 5 1003 843 286 121 101 chr15 54826249 54827068 -48667906 - L1MB8 LINE L1 -2697 4309 3405 5 1003 2194 158 56 15 chr15 54827068 54827459 -48667515 - MTB_Mm LTR MaLR 0 407 1 5 1003 843 286 121 101 chr15 54827459 54827502 -48667472 - L1MB8 LINE L1 -3602 3404 3380 5 1003 1064 207 9 19 chr15 54827502 54827714 -48667260 - B3 SINE B2 -6 210 1 5 1003 843 286 121 101 chr15 54827714 54827972 -48667002 - L1MB8 LINE L1 -3627 3379 3183 5 1003 973 126 6 11 chr15 54827972 54828148 -48666826 + (TTTC)n Simple_repeat Simple_repeat 1 175 0 5 1003 843 239 329 31 chr15 54828148 54828525 -48666449 - L1MB8 LINE L1 -3726 3608 2953 5 1003 1693 149 97 76 chr15 54828525 54828895 -48666079 - ORR1C1 LTR MaLR 0 378 1 5 1003 378 239 329 31 chr15 54828895 54829130 -48665844 - L1MB8 LINE L1 -4274 3060 2798 5 1003 474 309 34 38 chr15 54829301 54829540 -48665434 - L1MB8 LINE L1 -4535 2799 2562 5 1003 535 303 40 20 chr15 54829551 54829750 -48665224 + B3 SINE B2 10 212 -4 5 1003 2691 202 72 203 chr15 54831202 54832743 -48662231 + RMER1A Other Other 47 1054 -12 5 1003 28 0 0 0 chr15 54832757 54832785 -48662189 + AT_rich Low_complexity Low_complexity 1 28 0 5 1003 552 274 140 0 chr15 54832848 54833005 -48661969 - ID_B1 SINE B4 -37 187 9 5 1003 500 283 216 33 chr15 54833011 54833127 -48661847 - L1MB8 LINE L1 -4578 2524 2383 5 1003 1275 128 5 11 chr15 54833127 54833317 -48661657 + B2_Mm2 SINE B2 3 191 -4 5 1003 500 307 47 30 chr15 54833317 54833565 -48661409 - L1MB8 LINE L1 -4624 2478 2221 5 1003 599 270 14 28 chr15 54833610 54833751 -48661223 - RSINE1 SINE B4 0 165 27 5 1003 317 315 96 29 chr15 54833763 54833972 -48661002 - L1MB8 LINE L1 -5247 2087 1865 5 1003 905 282 170 21 chr15 54834014 54834532 -48660442 - L1MB8 LINE L1 -6136 1198 604 5 1003 503 306 223 51 chr15 54834553 54834925 -48660049 - L1MB8 LINE L1 -6873 461 26 5 1003 217 363 26 34 chr15 54835001 54835118 -48659856 - MIR SINE MIR -112 150 35 5 1003 294 302 0 0 chr15 54835173 54835236 -48659738 + PB1 SINE Alu 1 63 -64 5 1003 215 200 0 0 chr15 54835362 54835402 -48659572 + (CAGA)n Simple_repeat Simple_repeat 3 42 0 5 1003 402 21 0 0 chr15 54835406 54835453 -48659521 + (GA)n Simple_repeat Simple_repeat 2 48 0 5 1003 232 233 0 27 chr15 54836553 54836576 -48658398 + T-rich Low_complexity Low_complexity 52 73 0 5 1003 1687 52 0 0 chr15 54836576 54836768 -48658206 - B2_Mm1t SINE B2 -1 192 1 5 1003 232 233 0 27 chr15 54836768 54836819 -48658155 + T-rich Low_complexity Low_complexity 1 51 0 5 1003 1333 34 0 0 chr15 54836819 54836966 -48658008 - B1_Mus2 SINE Alu 0 147 1 5 1003 327 25 0 0 chr15 54837155 54837195 -48657779 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1003 276 264 65 113 chr15 54837243 54837367 -48657607 + PB1D10 SINE Alu 10 127 0 5 1003 487 278 15 0 chr15 54837379 54837512 -48657462 + B1F2 SINE Alu 1 135 -14 5 1003 200 267 0 0 chr15 54837611 54837656 -48657318 + (CAGA)n Simple_repeat Simple_repeat 4 48 0 5 1003 277 344 71 19 chr15 54838170 54838324 -48656650 - MIR3 SINE MIR -26 182 21 6 1003 21 0 0 0 chr15 54838543 54838564 -48656410 + AT_rich Low_complexity Low_complexity 1 21 0 6 1003 24 0 0 0 chr15 54838665 54838689 -48656285 + AT_rich Low_complexity Low_complexity 1 24 0 6 1003 436 241 0 0 chr15 54838973 54839060 -48655914 + B3 SINE B2 2 88 -128 6 1003 1426 264 58 36 chr15 54839057 54839524 -48655450 - MT2A LTR ERVL -16 517 41 6 1003 493 248 18 44 chr15 54839519 54839633 -48655341 + B3 SINE B2 100 210 -6 6 1003 210 222 0 36 chr15 54839638 54839694 -48655280 + GA-rich Low_complexity Low_complexity 1 54 0 6 1003 21 82 0 0 chr15 54840058 54840107 -48654867 + AT_rich Low_complexity Low_complexity 1 49 0 6 1003 452 256 32 49 chr15 54840168 54840291 -48654683 - RSINE1 SINE B4 -30 135 15 6 1003 388 271 90 30 chr15 54840544 54840677 -48654297 + B1F2 SINE Alu 8 148 -1 6 1003 296 202 97 88 chr15 54841247 54841361 -48653613 + L1M2 LINE L1 3847 3961 -2179 6 1003 489 206 181 121 chr15 54841378 54841560 -48653414 + B3A SINE B2 1 193 -2 6 1003 1561 260 93 122 chr15 54841560 54842722 -48652252 + L1M2 LINE L1 3953 5095 -1048 6 1003 967 60 105 0 chr15 54842722 54842855 -48652119 + B1_Mus2 SINE Alu 1 147 0 6 1003 1561 242 113 105 chr15 54842855 54843296 -48651678 + L1M2 LINE L1 5096 5524 -788 6 1003 352 356 20 0 chr15 54843296 54843442 -48651532 + B4A SINE B4 8 156 -136 6 1003 304 315 104 20 chr15 54843381 54843582 -48651392 - MLT1A0 LTR MaLR -145 220 3 6 1003 327 194 32 0 chr15 54843925 54843987 -48650987 - L1MD3 LINE L1 -579 7416 7353 6 1003 228 281 0 111 chr15 54844625 54844697 -48650277 + URR1B DNA MER1_type 2 65 -160 6 1003 180 0 0 0 chr15 54844699 54844719 -48650255 + (T)n Simple_repeat Simple_repeat 1 20 0 6 1003 1303 54 0 0 chr15 54844719 54844866 -48650108 - B1_Mus2 SINE Alu 0 147 1 6 1003 921 135 51 6 chr15 54844866 54845023 -48649951 + URR1B DNA MER1_type 52 215 -10 6 1003 1066 87 192 0 chr15 54845382 54845543 -48649431 - B2_Mm2 SINE B2 -3 192 1 6 1003 236 278 0 0 chr15 54845814 54845868 -48649106 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 6 1003 536 248 80 0 chr15 54846312 54846437 -48648537 + B1_Mur2 SINE Alu 3 137 -12 6 1003 504 194 126 0 chr15 54847080 54847183 -48647791 - PB1D10 SINE Alu -1 116 1 6 1003 24 0 0 0 chr15 54847393 54847417 -48647557 + AT_rich Low_complexity Low_complexity 1 24 0 6 1003 584 290 170 25 chr15 54849373 54849817 -48645157 + L1MC5 LINE L1 6732 7239 -722 6 1003 325 144 12 35 chr15 54851122 54851208 -48643766 + (TG)n Simple_repeat Simple_repeat 2 85 0 6 1003 216 300 0 0 chr15 54851843 54851893 -48643081 + RSINE1 SINE B4 2 51 -114 6 1003 240 163 0 0 chr15 54852088 54852131 -48642843 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 1003 1110 63 8 12 chr15 54852822 54853068 -48641906 + (TG)n Simple_repeat Simple_repeat 1 244 0 6 1003 360 180 16 0 chr15 54853068 54853129 -48641845 - RSINE1 SINE B4 -65 100 39 6 1003 213 258 65 0 chr15 54853134 54853196 -48641778 - RSINE1 SINE B4 -99 66 1 6 1003 300 27 0 0 chr15 54853199 54853236 -48641738 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1003 443 255 20 0 chr15 54853236 54853334 -48641640 - RSINE1 SINE B4 -65 100 1 6 1003 279 0 0 0 chr15 54854707 54854738 -48640236 + (A)n Simple_repeat Simple_repeat 1 31 0 6 1003 225 205 282 24 chr15 54854895 54854980 -48639994 + RSINE1 SINE B4 20 126 -39 6 1003 259 265 0 108 chr15 54854905 54854998 -48639976 - LTR78 LTR ERV1 -296 1008 926 6 1003 1438 73 57 0 chr15 54855030 54855207 -48639767 - B2_Mm2 SINE B2 -7 188 2 6 1003 240 340 0 0 chr15 54855208 54855261 -48639713 + RSINE1 SINE B4 93 145 -20 6 1003 249 33 0 0 chr15 54855261 54855291 -48639683 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1003 715 281 97 5 chr15 54855591 54855777 -48639197 + ID_B1 SINE B4 1 203 -21 6 1003 300 370 65 19 chr15 54855787 54856002 -48638972 + L1MEf LINE L1 1279 1503 -4697 6 1003 568 244 80 59 chr15 54856187 54856336 -48638638 + B3A SINE B2 1 153 -42 6 1003 207 0 0 0 chr15 54856336 54856359 -48638615 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 1003 452 244 80 59 chr15 54856359 54856396 -48638578 + B2_Mm2 SINE B2 154 191 -4 6 1003 1602 262 102 34 chr15 54856396 54857036 -48637938 + Lx8 LINE L1 6338 7020 -453 6 1003 307 323 53 16 chr15 54857310 54857490 -48637484 + L1_Mur2 LINE L1 2198 2391 -3489 6 1003 698 185 8 0 chr15 54857576 54857695 -48637279 - B1_Mus2 SINE Alu -3 144 25 6 1003 276 217 20 153 chr15 54857709 54857807 -48637167 + B4 SINE B4 208 292 0 6 1003 960 135 13 45 chr15 54858054 54858209 -48636765 + B1_Mur4 SINE Alu 1 150 0 6 1003 366 132 0 0 chr15 54858287 54858340 -48636634 - B1_Mur1 SINE Alu -11 138 86 6 1003 273 297 124 73 chr15 54858370 54858389 -48636585 - B3A SINE B2 -6 192 7 6 1003 708 253 25 25 chr15 54858389 54858547 -48636427 - RSINE1 SINE B4 0 165 8 6 1003 886 209 7 0 chr15 54859034 54859173 -48635801 + B1_Mus2 SINE Alu 1 140 -7 6 1003 1048 72 0 7 chr15 54860148 54860287 -48634687 - B1_Mus1 SINE Alu -6 142 5 6 1003 305 360 7 103 chr15 54860330 54860485 -48634489 - RSINE1 SINE B4 0 165 26 6 1003 333 0 0 0 chr15 54861989 54862026 -48632948 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1003 501 292 55 6 chr15 54862028 54862221 -48632753 + B4 SINE B4 3 197 -95 6 1003 1192 195 85 30 chr15 54862314 54862584 -48632390 + RMER1A Other Other 746 1030 0 6 1003 244 257 48 96 chr15 54863146 54863271 -48631703 + PB1D7 SINE Alu 2 120 0 6 1003 676 155 31 101 chr15 54863310 54863334 -48631640 + PB1D9 SINE Alu 1 24 -96 6 1003 1147 42 42 14 chr15 54863334 54863478 -48631496 - B1_Mus1 SINE Alu 0 148 1 6 1003 676 155 31 101 chr15 54863478 54863582 -48631392 + PB1D9 SINE Alu 25 120 0 6 1003 308 270 40 0 chr15 54863733 54863807 -48631167 - RSINE1 SINE B4 -15 150 74 6 1003 3151 35 3 0 chr15 54864445 54864790 -48630184 + ORR1A0 LTR MaLR 1 346 0 6 1003 259 269 19 0 chr15 54865283 54865335 -48629639 + RSINE1 SINE B4 113 165 0 6 1003 1188 70 0 0 chr15 54866082 54866224 -48628750 + B1_Mus1 SINE Alu 1 142 -6 6 1003 349 18 35 52 chr15 54866228 54866286 -48628688 + (TAAA)n Simple_repeat Simple_repeat 2 58 0 6 1003 674 228 8 78 chr15 54866830 54867060 -48627914 + B3A SINE B2 1 212 -4 6 1003 645 248 14 0 chr15 54867063 54867204 -48627770 - B1F2 SINE Alu -5 144 2 6 1003 189 0 0 0 chr15 54867764 54867785 -48627189 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 6 1003 871 155 224 28 chr15 54868318 54868497 -48626477 + B3 SINE B2 2 215 -1 6 1003 637 121 34 212 chr15 54868737 54868916 -48626058 + B1_Mur2 SINE Alu 2 148 -1 6 1003 1032 92 34 34 chr15 54869118 54869265 -48625709 + B1_Mus2 SINE Alu 1 147 0 6 1003 360 319 20 59 chr15 54869330 54869483 -48625491 + RSINE1 SINE B4 4 150 -15 6 1003 28 48 0 0 chr15 54869702 54869744 -48625230 + AT_rich Low_complexity Low_complexity 1 42 0 6 1003 306 0 0 0 chr15 54870099 54870133 -48624841 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 1003 339 25 0 0 chr15 54870133 54870172 -48624802 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1003 189 0 0 0 chr15 54870940 54870961 -48624013 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1003 718 218 44 84 chr15 54870976 54871201 -48623773 + B3 SINE B2 1 216 0 6 1003 522 306 29 12 chr15 54872641 54872813 -48622161 + MTEa LTR MaLR 48 222 -157 6 1003 696 24 0 0 chr15 54872887 54872969 -48622005 + (TCCC)n Simple_repeat Simple_repeat 1 82 0 6 1003 237 242 16 0 chr15 54873153 54873215 -48621759 - Charlie9 DNA MER1_type -8 2749 2687 6 1003 313 385 27 0 chr15 54873547 54873695 -48621279 - Lx8 LINE L1 -293 7180 7029 6 1003 22 0 0 0 chr15 54876004 54876026 -48618948 + AT_rich Low_complexity Low_complexity 1 22 0 6 1003 635 214 38 0 chr15 54876426 54876540 -48618434 + B1_Mur4 SINE Alu 7 120 -30 6 1003 669 58 0 0 chr15 54876540 54876626 -48618348 + (CA)n Simple_repeat Simple_repeat 2 87 0 6 1003 635 214 38 0 chr15 54876626 54876642 -48618332 + B1_Mur4 SINE Alu 121 141 -9 6 1003 757 219 35 56 chr15 54876809 54877007 -48617967 - B2_Mm2 SINE B2 -1 194 1 6 1003 1092 229 15 10 chr15 54878270 54878473 -48616501 + B3 SINE B2 3 206 -10 6 1003 23 0 0 0 chr15 54878481 54878504 -48616470 + AT_rich Low_complexity Low_complexity 1 23 0 6 1003 294 95 0 0 chr15 54879227 54879269 -48615705 + (TTA)n Simple_repeat Simple_repeat 1 42 0 6 1003 363 248 75 19 chr15 54879333 54879440 -48615534 + PB1D7 SINE Alu 1 113 -7 6 1003 287 255 171 29 chr15 54879503 54879608 -48615366 + PB1D9 SINE Alu 1 120 0 6 1003 855 117 149 36 chr15 54881807 54881975 -48612999 + B2_Mm2 SINE B2 3 189 -6 6 1003 1262 62 0 0 chr15 54881982 54882128 -48612846 + B1_Mus2 SINE Alu 2 147 0 6 1003 1692 136 50 62 chr15 54882186 54882508 -48612466 + ORR1A3 LTR MaLR 1 318 -8 6 1003 320 317 0 3 chr15 54882512 54882595 -48612379 + ID2 SINE ID 8 89 -63 6 1003 975 119 0 0 chr15 54882595 54882771 -48612203 + (GGAAA)n Simple_repeat Simple_repeat 3 178 0 6 1003 281 333 0 27 chr15 54882771 54882798 -48612176 + BC1_Mm scRNA scRNA 90 115 -37 6 1003 2552 222 52 21 chr15 54882908 54883488 -48611486 + ORR1D1-int LTR MaLR 768 1365 -5 6 1003 579 205 123 19 chr15 54883493 54883647 -48611327 + ORR1D1 LTR MaLR 1 170 -204 6 1003 667 222 63 21 chr15 54884163 54884352 -48610622 + RMER5 LTR ERV1 338 534 0 6 1003 317 348 78 35 chr15 54884352 54884605 -48610369 - MTE-int LTR MaLR -239 1341 1078 6 1003 1156 271 39 3 chr15 54884863 54885170 -48609804 - MTE-int LTR MaLR -1260 320 3 6 1003 234 316 77 72 chr15 54885300 54885508 -48609466 - MTEa LTR MaLR -163 216 8 6 1003 268 340 31 0 chr15 54886410 54886507 -48608467 + MIR SINE MIR 56 155 -107 6 1003 370 293 62 35 chr15 54887082 54887227 -48607747 + RSINE1 SINE B4 2 150 -15 6 1003 188 172 0 0 chr15 54887666 54887695 -48607279 + L2b LINE L2 3324 3352 -23 6 1003 273 164 32 32 chr15 54887750 54887813 -48607161 + ID4 SINE ID 3 65 -18 6 1003 7725 51 32 7 chr15 54888036 54889044 -48605930 + L1_Mus1 LINE L1 5535 6567 0 7 1003 237 288 0 0 chr15 54889144 54889203 -48605771 + ID4_ SINE ID 2 60 -23 7 1003 357 24 0 0 chr15 54889349 54889391 -48605583 + (TC)n Simple_repeat Simple_repeat 1 42 0 7 1003 417 86 0 0 chr15 54889392 54889450 -48605524 + (CACG)n Simple_repeat Simple_repeat 1 58 0 7 1003 365 277 23 49 chr15 54889558 54889690 -48605284 + B1_Mur1 SINE Alu 15 141 -8 7 1003 215 288 38 0 chr15 54889746 54889826 -48605148 - ID4 SINE ID 0 83 1 7 1003 33 56 0 0 chr15 54890043 54890097 -48604877 + AT_rich Low_complexity Low_complexity 1 54 0 7 1003 256 278 113 57 chr15 54890129 54890270 -48604704 - B1_Mur2 SINE Alu 0 149 1 7 1003 198 0 0 0 chr15 54890280 54890302 -48604672 + (GGGGA)n Simple_repeat Simple_repeat 4 25 0 7 1003 192 77 0 0 chr15 54891054 54891080 -48603894 + (A)n Simple_repeat Simple_repeat 1 26 0 7 1003 243 293 0 83 chr15 54892908 54892923 -48602051 + MT2B2 LTR ERVL 155 160 -424 7 1003 312 269 81 27 chr15 54892923 54893034 -48601940 + PB1D10 SINE Alu 1 117 0 7 1003 1201 15 0 0 chr15 54895672 54895806 -48599168 + B1_Mm SINE Alu 1 134 -13 7 1003 416 208 192 0 chr15 54895833 54895958 -48599016 + B1_Mus2 SINE Alu 1 149 0 7 1003 529 148 1 0 chr15 54896442 54896537 -48598437 + PB1D9 SINE Alu 4 99 -21 7 1003 320 43 0 21 chr15 54896537 54896584 -48598390 + (GGGA)n Simple_repeat Simple_repeat 4 49 0 7 1003 321 292 129 14 chr15 54896696 54896835 -48598139 - MER5A DNA MER1_type -25 164 10 7 1003 330 323 11 0 chr15 54898847 54898940 -48596034 + B1F2 SINE Alu 9 102 -47 7 1003 435 248 77 0 chr15 54899008 54899125 -48595849 - B1_Mur1 SINE Alu -22 127 2 7 1003 291 239 50 71 chr15 54899125 54899153 -48595821 - MT2B LTR ERVL -436 165 140 7 1003 391 175 0 0 chr15 54899235 54899298 -48595676 + B1_Mur2 SINE Alu 64 126 -23 7 1003 345 307 36 0 chr15 54899357 54899456 -48595518 + B1F SINE Alu 19 120 0 7 1003 1451 80 16 0 chr15 54899460 54899648 -48595326 + B2_Mm2 SINE B2 2 192 -3 7 1003 1063 80 0 7 chr15 54899683 54899822 -48595152 + B1_Mus2 SINE Alu 1 138 -9 7 1003 207 0 0 0 chr15 54899822 54899845 -48595129 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1003 401 236 65 9 chr15 54900983 54901090 -48593884 - PB1D7 SINE Alu -7 113 1 7 1003 294 224 60 0 chr15 54901117 54901184 -48593790 - PB1 SINE Alu -30 97 27 7 1003 274 159 0 0 chr15 54901735 54901779 -48593195 + ERVL-B4-int LTR ERVL 2168 2211 -3503 7 1003 1006 93 55 12 chr15 54902001 54902164 -48592810 + B2_Mm2 SINE B2 1 170 -25 7 1003 1185 55 14 0 chr15 54902283 54902429 -48592545 + B1_Mus1 SINE Alu 1 148 0 7 1003 1240 79 90 0 chr15 54904637 54904796 -48590178 + B2_Mm1a SINE B2 1 160 -33 7 1003 282 56 0 0 chr15 54904796 54904832 -48590142 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 7 1003 1240 79 90 0 chr15 54904832 54904849 -48590125 + B2_Mm1a SINE B2 161 191 -2 7 1003 1470 45 22 0 chr15 54904851 54905029 -48589945 + B2_Mm2 SINE B2 2 183 -12 7 1003 381 83 319 60 chr15 54905079 54905195 -48589779 + B2_Mm2 SINE B2 47 192 -3 7 1003 848 205 51 32 chr15 54905436 54905653 -48589321 + URR1A DNA MER1_type 1 221 -5 7 1003 892 72 0 0 chr15 54905655 54905780 -48589194 + B1_Mus2 SINE Alu 2 126 -21 7 1003 1027 187 45 78 chr15 54906223 54906686 -48588288 + MT2A LTR ERVL 3 543 -58 7 1003 1129 88 0 13 chr15 54906914 54907063 -48587911 - B1_Mus1 SINE Alu 0 148 2 7 1003 320 184 0 0 chr15 54907063 54907112 -48587862 - B1_Mur4 SINE Alu -95 55 7 7 1003 222 37 0 0 chr15 54907126 54907153 -48587821 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1003 446 365 13 6 chr15 54907327 54907484 -48587490 + RSINE1 SINE B4 4 161 -4 7 1003 609 170 0 0 chr15 54908552 54908664 -48586310 + (CAGA)n Simple_repeat Simple_repeat 2 113 0 7 1003 506 292 14 42 chr15 54908681 54908824 -48586150 + RSINE1 SINE B4 8 146 -19 7 1003 331 209 66 98 chr15 54909093 54909215 -48585759 + B3 SINE B2 1 118 -98 7 1003 417 129 0 0 chr15 54909227 54909297 -48585677 + (CCCTAA)n Simple_repeat Simple_repeat 5 74 0 7 1003 735 53 292 0 chr15 54909549 54909662 -48585312 - B1_Mus1 SINE Alu -2 146 1 7 1003 189 107 0 0 chr15 54909699 54909727 -48585247 + (CAGAG)n Simple_repeat Simple_repeat 5 32 0 7 1003 237 300 62 70 chr15 54909926 54910055 -48584919 + B4A SINE B4 156 283 -9 7 1003 228 327 96 17 chr15 54910180 54910295 -48584679 - L2 LINE L2 -1862 1557 1434 7 1003 197 262 48 16 chr15 54910391 54910453 -48584521 - L2 LINE L2 -2127 1292 1229 7 1003 638 218 27 27 chr15 54910663 54910809 -48584165 + B1F SINE Alu 4 149 0 7 1003 391 233 100 0 chr15 54910842 54910962 -48584012 + ID_B1 SINE B4 86 217 -7 7 1003 521 275 52 81 chr15 54910979 54911153 -48583821 + B4A SINE B4 7 175 -117 7 1003 208 36 125 0 chr15 54911165 54911221 -48583753 + (CAAAC)n Simple_repeat Simple_repeat 2 64 0 7 1003 24 0 0 0 chr15 54912617 54912641 -48582333 + AT_rich Low_complexity Low_complexity 1 24 0 7 1003 378 0 0 0 chr15 54912641 54912683 -48582291 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1003 518 266 115 0 chr15 54912715 54912828 -48582146 - RSINE1 SINE B4 -29 136 11 7 1003 890 249 27 14 chr15 54912878 54913098 -48581876 - ID_B1 SINE B4 0 224 2 7 1003 570 333 34 19 chr15 54913203 54913411 -48581563 + ID_B1 SINE B4 14 224 0 7 1003 372 167 0 0 chr15 54913418 54913490 -48581484 + GA-rich Low_complexity Low_complexity 4 75 0 7 1003 253 250 102 125 chr15 54913944 54914072 -48580902 - RSINE1 SINE B4 0 165 41 7 1003 2625 71 3 0 chr15 54914109 54914435 -48580539 + ORR1A2 LTR MaLR 1 327 0 7 1003 548 176 80 14 chr15 54915035 54915173 -48579801 + B3 SINE B2 70 216 0 7 1003 569 224 211 35 chr15 54915266 54915465 -48579509 - ETnERV2-int LTR ERVK -4719 2687 2454 7 1003 387 132 191 2 chr15 54915478 54915568 -48579406 - RLTR19-int LTR ERVK -5077 1060 974 7 1003 443 219 67 20 chr15 54916061 54916210 -48578764 + L1MA9 LINE L1 5783 5938 -374 7 1003 360 233 0 97 chr15 54916616 54916730 -48578244 + PB1D7 SINE Alu 1 103 -17 7 1003 572 267 13 20 chr15 54917312 54917452 -48577522 + B1_Mur1 SINE Alu 1 139 -10 7 1003 453 36 0 0 chr15 54917452 54917507 -48577467 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 7 1003 566 118 11 0 chr15 54918037 54918130 -48576844 + (TG)n Simple_repeat Simple_repeat 2 95 0 7 1003 949 124 0 0 chr15 54918461 54918606 -48576368 - B1_Mus1 SINE Alu 0 148 4 7 1003 253 229 14 14 chr15 54918660 54918731 -48576243 - 5S rRNA rRNA -2 119 49 7 1003 307 268 40 30 chr15 54918949 54919049 -48575925 + B4A SINE B4 73 173 -119 7 1003 385 236 0 11 chr15 54918964 54919058 -48575916 + B1_Mur3 SINE Alu 6 98 -51 7 1003 22 80 0 0 chr15 54919086 54919136 -48575838 + AT_rich Low_complexity Low_complexity 1 50 0 7 1004 240 250 27 14 chr15 54919463 54919536 -48575438 + B3 SINE B2 143 216 0 7 1004 365 280 108 95 chr15 54919540 54919562 -48575412 + B4 SINE B4 64 87 -205 7 1004 723 181 72 0 chr15 54919562 54919700 -48575274 + B1F2 SINE Alu 2 149 0 7 1004 218 163 47 0 chr15 54919761 54919804 -48575170 + PB1D7 SINE Alu 68 112 -8 7 1004 653 271 15 25 chr15 54919814 54919892 -48575082 + ID SINE ID 6 81 -143 7 1004 337 271 52 52 chr15 54919892 54920028 -48574946 + B1F SINE Alu 1 136 -13 7 1004 273 57 0 0 chr15 54920028 54920063 -48574911 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 1004 519 186 50 72 chr15 54920065 54920204 -48574770 + B3 SINE B2 81 216 0 7 1004 28 29 0 0 chr15 54920207 54920242 -48574732 + AT_rich Low_complexity Low_complexity 1 35 0 7 1004 1211 62 0 0 chr15 54920284 54920430 -48574544 + B1_Mm SINE Alu 1 146 -1 7 1004 1320 80 31 36 chr15 54920761 54920956 -48574018 + B2_Mm2 SINE B2 1 194 -1 7 1004 867 229 19 28 chr15 54921019 54921235 -48573739 + ORR1D2 LTR MaLR 1 214 -156 7 1004 778 168 20 20 chr15 54922987 54923133 -48571841 + B1_Mus1 SINE Alu 1 146 -2 7 1004 587 135 42 0 chr15 54923162 54923258 -48571716 + B1_Mur1 SINE Alu 24 123 -26 7 1004 270 0 0 0 chr15 54923281 54923311 -48571663 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 1004 559 265 34 7 chr15 54923406 54923554 -48571420 + RSINE1 SINE B4 12 163 -2 7 1004 22 0 0 0 chr15 54923554 54923576 -48571398 + AT_rich Low_complexity Low_complexity 1 22 0 7 1004 2227 125 89 22 chr15 54923592 54923961 -48571013 - ORR1B1 LTR MaLR 0 394 1 7 1004 1345 237 45 17 chr15 54924135 54924487 -48570487 - MTEb LTR MaLR -13 366 5 7 1004 1020 75 30 24 chr15 54924487 54924631 -48570343 + MTB LTR MaLR 1 145 -255 7 1004 1794 123 150 91 chr15 54924631 54925070 -48569904 - MURVY-LTR LTR ERV1 0 519 55 7 1004 1965 68 14 4 chr15 54925084 54925362 -48569612 + MTB LTR MaLR 120 400 0 7 1004 2237 299 53 54 chr15 54925437 54925648 -48569326 + Lx8 LINE L1 6506 6704 -769 7 1004 207 0 0 0 chr15 54925648 54925671 -48569303 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1004 2237 299 53 54 chr15 54925671 54926261 -48568713 + Lx8 LINE L1 6705 7305 -168 7 1004 1812 129 27 145 chr15 54926261 54926468 -48568506 - RLTR15 LTR ERVK 0 359 204 7 1004 1279 27 0 0 chr15 54926468 54926615 -48568359 - B1_Mus2 SINE Alu 0 147 1 7 1004 1812 129 27 145 chr15 54926615 54926814 -48568160 - RLTR15 LTR ERVK -156 203 1 7 1004 2237 299 53 54 chr15 54926814 54926914 -48568060 + Lx8 LINE L1 7306 7407 -66 7 1004 5556 85 15 14 chr15 54926997 54927852 -48567122 + RLTR22_Mur LTR ERVK 1 856 -992 7 1004 330 302 78 60 chr15 54928060 54928278 -48566696 + RMER12 LTR ERVK 1101 1322 0 8 1004 1040 69 8 0 chr15 54928309 54928440 -48566534 + B1_Mus1 SINE Alu 1 132 -16 8 1004 25 0 0 0 chr15 54928441 54928466 -48566508 + GC_rich Low_complexity Low_complexity 1 25 0 8 1004 835 100 326 0 chr15 54928845 54929061 -48565913 + ORR1A2 LTR MaLR 1 318 -8 8 1004 500 299 46 105 chr15 54929100 54929339 -48565635 + Lx8 LINE L1 6893 7117 -356 8 1004 802 205 82 251 chr15 54929490 54929940 -48565034 - ORR1D1 LTR MaLR 0 374 1 8 1004 5315 120 36 19 chr15 54930056 54930993 -48563981 - RMER17B LTR ERVK -5 953 1 8 1004 659 271 112 13 chr15 54931003 54931227 -48563747 + ORR1D2 LTR MaLR 122 367 -3 8 1004 262 295 76 76 chr15 54931230 54931362 -48563612 - LTR33A_ LTR ERVL -383 148 17 8 1004 489 200 17 43 chr15 54931519 54931634 -48563340 - RMER5 LTR ERV1 0 534 423 8 1004 1759 156 114 11 chr15 54931632 54931982 -48562992 + MTB_Mm LTR MaLR 22 407 0 8 1004 1240 231 92 18 chr15 54931982 54932374 -48562600 - RMER5 LTR ERV1 -113 421 1 8 1004 1368 78 16 16 chr15 54932542 54932736 -48562238 - B2_Mm2 SINE B2 0 195 2 8 1004 368 218 56 33 chr15 54932817 54932828 -48562146 - B4A SINE B4 -10 282 272 8 1004 207 0 0 0 chr15 54932828 54932851 -48562123 + (TC)n Simple_repeat Simple_repeat 2 24 0 8 1004 402 69 0 0 chr15 54932851 54932908 -48562066 + (TG)n Simple_repeat Simple_repeat 1 58 0 8 1004 368 218 56 33 chr15 54932908 54932985 -48561989 - B4A SINE B4 -21 271 192 8 1004 324 273 13 0 chr15 54932983 54933060 -48561914 - B4A SINE B4 -214 78 1 8 1004 441 0 0 0 chr15 54933106 54933155 -48561819 + (TC)n Simple_repeat Simple_repeat 2 50 0 8 1004 852 117 325 0 chr15 54933189 54933343 -48561631 - B3 SINE B2 -9 207 4 8 1004 486 191 0 50 chr15 54933810 54933909 -48561065 - ID_B1 SINE B4 -1 223 130 8 1004 588 254 23 62 chr15 54933902 54934078 -48560896 - RMER12 LTR ERVK -9 1313 1145 8 1004 5137 30 13 0 chr15 54934079 54934679 -48560295 + L1Md_F3 LINE L1 5975 6582 -2 8 1004 1871 62 43 2 chr15 54935097 54935388 -48559586 - ORR1A2 LTR MaLR 0 394 57 8 1004 665 186 51 57 chr15 54935361 54935538 -48559436 - RLTR22_Mur LTR ERVK -1214 634 459 8 1004 281 191 19 1 chr15 54935744 54935804 -48559170 + PB1D7 SINE Alu 1 60 -57 8 1004 495 0 0 0 chr15 54935804 54935859 -48559115 + (CA)n Simple_repeat Simple_repeat 1 55 0 8 1004 279 229 105 15 chr15 54935859 54935920 -48559054 + PB1D10 SINE Alu 61 137 -10 8 1004 802 129 0 31 chr15 54936043 54936171 -48558803 + B2_Mm2 SINE B2 2 125 -70 8 1004 470 17 17 0 chr15 54936201 54936260 -48558714 + (TA)n Simple_repeat Simple_repeat 1 60 0 8 1004 342 0 0 0 chr15 54936260 54936297 -48558677 + (GA)n Simple_repeat Simple_repeat 2 39 0 8 1004 2384 166 42 58 chr15 54936611 54937029 -48557945 + RMER6C LTR ERVK 127 542 -148 8 1004 2476 113 11 24 chr15 54937029 54937402 -48557572 + RLTR9A LTR ERVK 1 368 0 8 1004 2384 166 42 58 chr15 54937402 54937554 -48557420 + RMER6C LTR ERVK 543 688 -2 8 1004 1106 90 83 22 chr15 54937554 54937735 -48557239 + B2_Mm2 SINE B2 2 193 -2 8 1004 180 152 0 0 chr15 54937754 54937787 -48557187 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1004 368 20 20 0 chr15 54937836 54937885 -48557089 + (CA)n Simple_repeat Simple_repeat 2 51 0 8 1004 306 293 0 0 chr15 54938545 54938620 -48556354 - ID4 SINE ID -1 82 8 8 1004 893 50 0 0 chr15 54938706 54938827 -48556147 + B1_Mus2 SINE Alu 27 147 0 8 1004 965 210 5 0 chr15 54938846 54939032 -48555942 + Lx7 LINE L1 6912 7098 -598 8 1004 513 0 0 0 chr15 54939061 54939118 -48555856 + (TC)n Simple_repeat Simple_repeat 2 58 0 8 1004 1139 65 0 0 chr15 54939121 54939260 -48555714 - B1_Mus1 SINE Alu -6 142 4 8 1004 301 230 58 0 chr15 54939404 54939491 -48555483 + RSINE1 SINE B4 21 112 -53 8 1004 766 192 13 40 chr15 54939547 54939699 -48555275 - B1_Mur4 SINE Alu 0 150 3 8 1004 298 270 27 99 chr15 54939860 54939934 -48555040 - ID_B1 SINE B4 -8 216 149 8 1004 2164 116 3 58 chr15 54939934 54940282 -48554692 - ORR1A4 LTR MaLR 0 329 1 8 1004 298 270 27 99 chr15 54940282 54940318 -48554656 - ID_B1 SINE B4 -76 148 114 8 1004 2229 106 45 40 chr15 54941207 54941609 -48553365 + RLTR9F LTR ERVK 1 404 -11 8 1004 318 294 12 0 chr15 54941613 54941698 -48553276 + PB1D10 SINE Alu 32 117 0 8 1004 878 160 7 0 chr15 54942063 54942207 -48552767 + B1_Mus2 SINE Alu 1 145 -2 8 1004 454 255 9 9 chr15 54942393 54942500 -48552474 + PB1D10 SINE Alu 5 111 -6 8 1004 230 98 0 47 chr15 54942844 54942887 -48552087 + (TCC)n Simple_repeat Simple_repeat 1 41 0 8 1004 1375 74 15 50 chr15 54942887 54943087 -48551887 - B2_Mm2 SINE B2 -2 193 1 8 1004 215 227 176 33 chr15 54943153 54943244 -48551730 - PB1D10 SINE Alu -1 116 13 8 1004 259 264 0 0 chr15 54944061 54944114 -48550860 + (CGG)n Simple_repeat Simple_repeat 2 54 0 8 1004 274 258 63 20 chr15 54945837 54945952 -48549022 + MIRm SINE MIR 78 200 -8 8 1004 280 269 49 91 chr15 54946139 54946282 -48548692 + MIRm SINE MIR 66 202 -74 8 1004 395 324 29 0 chr15 54946286 54946388 -48548586 + B1F2 SINE Alu 10 114 -35 8 1004 234 0 0 0 chr15 54946400 54946426 -48548548 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 8 1004 364 292 16 48 chr15 54946551 54946677 -48548297 - RSINE1 SINE B4 -41 124 3 8 1004 541 248 14 42 chr15 54946677 54946817 -48548157 + ID_B1 SINE B4 87 222 -2 8 1004 582 204 0 26 chr15 54947155 54947271 -48547703 - PB1D7 SINE Alu -6 114 2 8 1004 206 105 0 26 chr15 54947632 54947671 -48547303 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 8 1004 1258 117 16 11 chr15 54947750 54947940 -48547034 - B2_Mm2 SINE B2 -3 192 2 8 1004 693 277 24 5 chr15 54948087 54948294 -48546680 - Lx8 LINE L1 -409 7064 6854 8 1004 483 224 7 107 chr15 54948334 54948402 -48546572 + ID_B1 SINE B4 99 159 -65 8 1004 1015 90 14 27 chr15 54948402 54948550 -48546424 + B1_Mus2 SINE Alu 2 147 0 8 1004 483 224 7 107 chr15 54948550 54948621 -48546353 + ID_B1 SINE B4 160 224 0 8 1004 476 245 17 47 chr15 54948720 54948836 -48546138 - B1F SINE Alu 0 120 2 8 1004 214 349 57 57 chr15 54948859 54948999 -48545975 - MIR SINE MIR -111 151 12 8 1004 492 318 144 15 chr15 54949030 54949231 -48545743 + B4A SINE B4 2 228 -64 8 1004 351 0 0 0 chr15 54949700 54949739 -48545235 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 1004 505 327 112 9 chr15 54949762 54950019 -48544955 - B4A SINE B4 0 292 13 8 1004 790 257 69 20 chr15 54950414 54950660 -48544314 + RMER5 LTR ERV1 75 332 -202 8 1004 458 254 144 0 chr15 54951615 54951733 -48543241 + B1F1 SINE Alu 1 135 -14 8 1004 387 60 0 0 chr15 54952098 54952148 -48542826 + (TC)n Simple_repeat Simple_repeat 1 50 0 8 1004 511 256 56 0 chr15 54952618 54952743 -48542231 + RSINE1 SINE B4 3 134 -31 8 1004 299 319 5 17 chr15 54953304 54953399 -48541575 - PB1D7 SINE Alu -14 103 10 8 1004 445 262 14 41 chr15 54953586 54953733 -48541241 - B1F1 SINE Alu -1 148 6 8 1004 631 226 13 46 chr15 54953752 54953905 -48541069 - B1_Mur2 SINE Alu 0 149 2 8 1004 539 276 53 67 chr15 54954934 54955067 -48539907 - ID_B1 SINE B4 -1 223 95 8 1004 1636 155 62 49 chr15 54955067 54955392 -48539582 + ORR1A4 LTR MaLR 1 329 0 8 1004 539 276 53 67 chr15 54955392 54955483 -48539491 - ID_B1 SINE B4 -130 94 2 8 1004 431 174 0 122 chr15 54956210 54956308 -48538666 + MT2B LTR ERVL 172 257 -344 8 1004 985 65 0 0 chr15 54956229 54956353 -48538621 + B1_Mus1 SINE Alu 25 148 0 8 1004 26 50 0 0 chr15 54956354 54956394 -48538580 + AT_rich Low_complexity Low_complexity 1 40 0 8 1004 218 269 0 0 chr15 54956464 54956516 -48538458 + CT-rich Low_complexity Low_complexity 2 53 0 8 1004 879 160 21 0 chr15 54956528 54956672 -48538302 - B1_Mur2 SINE Alu -2 147 1 8 1004 647 282 19 0 chr15 54956728 54956884 -48538090 - RSINE1 SINE B4 -4 161 3 8 1004 1117 178 9 53 chr15 54957825 54958051 -48536923 + B3 SINE B2 1 216 0 8 1004 220 281 0 15 chr15 54958503 54958568 -48536406 - B1F1 SINE Alu -85 64 1 8 1004 402 248 95 71 chr15 54958775 54958901 -48536073 + ID_B1 SINE B4 84 212 -12 8 1004 201 39 0 0 chr15 54958901 54958927 -48536047 + (CAAAC)n Simple_repeat Simple_repeat 4 29 0 8 1004 1243 28 7 0 chr15 54959092 54959235 -48535739 + B1_Mus2 SINE Alu 3 146 -1 8 1004 248 68 85 0 chr15 54959312 54959371 -48535603 + A-rich Low_complexity Low_complexity 2 65 0 8 1004 1192 153 38 0 chr15 54959397 54959580 -48535394 - B2_Mm2 SINE B2 0 195 6 8 1004 273 246 15 15 chr15 54959784 54959850 -48535124 - ID4 SINE ID -16 67 2 8 1004 297 0 0 0 chr15 54960046 54960079 -48534895 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1004 615 246 7 84 chr15 54960789 54960907 -48534067 - ID_B1 SINE B4 -2 222 115 8 1004 1332 84 20 20 chr15 54960907 54961102 -48533872 + B2_Mm2 SINE B2 1 195 0 8 1004 615 246 7 84 chr15 54961102 54961138 -48533836 - ID_B1 SINE B4 -110 114 80 8 1004 232 227 0 0 chr15 54961106 54961150 -48533824 - MT2B LTR ERVL -314 287 244 8 1004 536 237 23 8 chr15 54961178 54961310 -48533664 + B1F SINE Alu 14 147 -2 8 1004 791 259 12 91 chr15 54961318 54961560 -48533414 + ID_B1 SINE B4 1 223 -1 8 1004 1149 152 142 0 chr15 54961736 54961933 -48533041 - URR1A DNA MER1_type -1 225 1 8 1004 247 308 115 31 chr15 54962559 54962750 -48532224 + RMER17D2 LTR ERVK 175 381 -428 8 1004 278 296 15 142 chr15 54962746 54962880 -48532094 - ID_B1 SINE B4 -6 218 102 8 1004 1853 172 83 3 chr15 54963287 54963626 -48531348 - ORR1B2 LTR MaLR -1 366 1 8 1004 195 283 38 0 chr15 54964161 54964214 -48530760 - MIR3 SINE MIR -41 167 113 8 1004 186 43 0 0 chr15 54964340 54964363 -48530611 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 8 1004 353 288 86 23 chr15 54964904 54965078 -48529896 + MER5A DNA MER1_type 1 185 -4 9 1004 2830 68 52 3 chr15 54965871 54966252 -48528722 + MTB LTR MaLR 1 400 0 9 1004 269 252 57 90 chr15 54967453 54967490 -48527484 + MT2B LTR ERVL 123 155 -446 9 1004 705 216 0 45 chr15 54967490 54967586 -48527388 + B1_Mus1 SINE Alu 1 95 -53 9 1004 1993 118 75 55 chr15 54967586 54967753 -48527221 + RMER17C LTR ERVK 1 184 -226 9 1004 750 53 0 0 chr15 54967753 54967848 -48527126 + (TCC)n Simple_repeat Simple_repeat 2 96 0 9 1004 1993 118 75 55 chr15 54967848 54968082 -48526892 + RMER17C LTR ERVK 185 410 0 9 1004 705 216 0 45 chr15 54968082 54968140 -48526834 + B1_Mus1 SINE Alu 96 148 0 9 1004 230 246 0 0 chr15 54968195 54968260 -48526714 + (TTTG)n Simple_repeat Simple_repeat 3 67 0 9 1004 691 213 61 79 chr15 54968491 54968705 -48526269 - RMER5 LTR ERV1 -282 252 43 9 1004 513 227 31 20 chr15 54968815 54968930 -48526044 - B1F SINE Alu 0 120 10 9 1004 251 363 62 39 chr15 54968835 54968964 -48526010 - B4A SINE B4 -97 195 64 9 1004 325 280 142 16 chr15 54969127 54969254 -48525720 + B1F1 SINE Alu 2 144 -5 9 1004 407 245 0 47 chr15 54969151 54969258 -48525716 + ID_B1 SINE B4 122 223 -1 9 1004 279 0 0 0 chr15 54969290 54969321 -48525653 + (GA)n Simple_repeat Simple_repeat 2 32 0 9 1004 309 26 0 0 chr15 54969421 54969459 -48525515 + (TG)n Simple_repeat Simple_repeat 1 38 0 9 1004 466 283 45 38 chr15 54969597 54969729 -48525245 - B3A SINE B2 -30 168 36 9 1004 977 33 8 0 chr15 54969755 54969876 -48525098 - B1_Mm SINE Alu 0 147 26 9 1004 384 195 0 121 chr15 54969789 54969888 -48525086 - MT2B LTR ERVL -337 264 178 9 1004 299 233 13 40 chr15 54970038 54970114 -48524860 + B1_Mus1 SINE Alu 67 140 -8 9 1004 26 30 0 0 chr15 54970114 54970147 -48524827 + AT_rich Low_complexity Low_complexity 1 33 0 9 1004 549 292 0 0 chr15 54970419 54970556 -48524418 + B1F2 SINE Alu 5 141 -8 9 1004 355 22 22 0 chr15 54971580 54971625 -48523349 + B2_Mm1t SINE B2 60 105 -88 9 1004 429 280 127 8 chr15 54972095 54972221 -48522753 - ID_B1 SINE B4 -1 223 83 9 1004 594 197 52 22 chr15 54972695 54972830 -48522144 + B1_Mur1 SINE Alu 2 140 -9 9 1004 314 292 97 0 chr15 54972969 54973086 -48521888 + PB1 SINE Alu 1 125 -2 9 1004 385 299 156 7 chr15 54973592 54973727 -48521247 - RSINE1 SINE B4 0 165 11 9 1004 445 266 17 34 chr15 54973759 54973876 -48521098 - B1F SINE Alu 0 149 35 9 1004 382 304 58 76 chr15 54973765 54973989 -48520985 - ID_B1 SINE B4 -3 221 2 9 1004 255 243 142 54 chr15 54974751 54974899 -48520075 - RSINE1 SINE B4 -2 163 3 9 1004 414 175 0 0 chr15 54974978 54975058 -48519916 + CT-rich Low_complexity Low_complexity 4 83 0 9 1004 1132 270 68 38 chr15 54975156 54975495 -48519479 - ORR1C2 LTR MaLR -35 349 1 9 1004 378 239 34 11 chr15 54976291 54976380 -48518594 + PB1D7 SINE Alu 23 113 -7 9 1004 424 102 0 0 chr15 54976535 54976594 -48518380 - ORR1A2 LTR MaLR 0 329 271 9 1004 464 40 0 5 chr15 54976615 54976680 -48518294 - B2_Mm2 SINE B2 -107 109 47 9 1004 215 171 24 0 chr15 54976644 54976685 -48518289 - B4 SINE B4 -210 82 41 9 1004 1355 85 11 0 chr15 54976708 54976884 -48518090 - B2_Mm1t SINE B2 -14 179 2 9 1004 1741 138 0 4 chr15 54976884 54977153 -48517821 - ORR1A2 LTR MaLR -43 284 17 9 1004 405 283 74 68 chr15 54977160 54977323 -48517651 - RSINE1 SINE B4 -1 164 1 9 1004 437 280 20 27 chr15 54977611 54977758 -48517216 - MER53 DNA hAT -3 190 45 9 1004 262 205 26 0 chr15 54977782 54977860 -48517114 + CT-rich Low_complexity Low_complexity 2 81 0 9 1004 275 109 0 45 chr15 54978325 54978392 -48516582 + T-rich Low_complexity Low_complexity 1 64 0 9 1004 1267 27 0 7 chr15 54978392 54978540 -48516434 - B1_Mus2 SINE Alu 0 147 1 9 1004 529 218 169 79 chr15 54978546 54978746 -48516228 - B3A SINE B2 0 198 1 9 1004 321 244 133 0 chr15 54979272 54979362 -48515612 - PB1D7 SINE Alu 0 120 19 9 1004 274 159 416 0 chr15 54979409 54979522 -48515452 - RMER1A Other Other 0 1030 871 9 1004 201 147 0 0 chr15 54979551 54979585 -48515389 + (TTCTC)n Simple_repeat Simple_repeat 1 34 0 9 1004 33 0 0 0 chr15 54980021 54980054 -48514920 + AT_rich Low_complexity Low_complexity 1 33 0 9 1004 402 341 83 14 chr15 54980253 54980470 -48514504 + MIR SINE MIR 27 258 -4 9 1004 309 302 185 0 chr15 54980476 54980510 -48514464 + B1F SINE Alu 3 143 -6 9 1004 495 190 0 12 chr15 54980510 54980595 -48514379 + ID_B1 SINE B4 135 218 -6 9 1004 244 118 0 0 chr15 54981113 54981147 -48513827 - tRNA-Gly-GGY tRNA tRNA -38 36 3 9 1004 344 209 0 157 chr15 54981208 54981316 -48513658 + ID_B1 SINE B4 129 219 -5 9 1004 1333 82 36 42 chr15 54981723 54981915 -48513059 + B2_Mm2 SINE B2 1 191 -4 9 1004 1253 190 178 34 chr15 54982066 54982392 -48512582 - ORR1D1 LTR MaLR -1 373 1 9 1004 1932 208 40 5 chr15 54982426 54982823 -48512151 + MTD LTR MaLR 1 411 -8 9 1004 201 138 0 0 chr15 54983151 54983180 -48511794 + (ATGGTG)n Simple_repeat Simple_repeat 3 31 0 9 1004 658 253 153 21 chr15 54983528 54983718 -48511256 - ID_B1 SINE B4 -1 223 9 9 1004 220 289 19 0 chr15 54984623 54984675 -48510299 + ID4 SINE ID 1 53 -30 9 1004 210 91 0 0 chr15 54984718 54984751 -48510223 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 9 1004 351 0 0 0 chr15 54984752 54984791 -48510183 + (TG)n Simple_repeat Simple_repeat 1 39 0 9 1004 22 0 0 0 chr15 54985166 54985188 -48509786 + AT_rich Low_complexity Low_complexity 1 22 0 9 1004 4589 207 42 30 chr15 54985732 54986763 -48508211 + Lx9 LINE L1 6579 7621 -23 9 1004 230 291 66 41 chr15 54987332 54987454 -48507520 - MIRc SINE MIR -40 228 104 9 1004 718 272 0 32 chr15 54987504 54987690 -48507284 + B3A SINE B2 3 182 -16 9 1004 389 287 140 0 chr15 54987821 54988057 -48506917 - B4A SINE B4 -20 272 4 9 1004 496 250 40 16 chr15 54988151 54988277 -48506697 - B1F2 SINE Alu -3 146 18 9 1004 683 240 7 7 chr15 54988575 54988722 -48506252 - B1_Mm SINE Alu 0 147 1 9 1004 294 266 51 76 chr15 54988621 54988739 -48506235 - MT2B LTR ERVL -344 257 143 9 1004 1464 73 5 15 chr15 54988748 54988943 -48506031 - B2_Mm1t SINE B2 0 193 1 9 1004 533 355 67 32 chr15 54989264 54989549 -48505425 - LTR40a LTR ERVL -221 298 4 9 1004 498 232 120 0 chr15 54989638 54989763 -48505211 - B1F SINE Alu -5 144 5 9 1004 480 277 30 23 chr15 54989959 54990092 -48504882 - ID_B1 SINE B4 -4 220 87 9 1004 2533 200 68 22 chr15 54990144 54990687 -48504287 + RMER1C Other Other 773 1340 -2 9 1004 12437 21 0 0 chr15 54990706 54992119 -48502855 - L1Md_T LINE L1 0 5883 4471 9 1004 6014 16 0 0 chr15 54992119 54992788 -48502186 + L1Md_T LINE L1 5913 6581 -1 9 1004 315 0 0 0 chr15 54992850 54992885 -48502089 + (A)n Simple_repeat Simple_repeat 1 35 0 9 1004 1369 61 61 0 chr15 54992889 54993069 -48501905 + B2_Mm2 SINE B2 2 192 -3 9 1004 1059 122 0 0 chr15 54993072 54993220 -48501754 + B1_Mur4 SINE Alu 1 148 -2 9 1004 1510 63 5 0 chr15 54993271 54993460 -48501514 + B2_Mm1t SINE B2 1 190 -3 9 1004 844 275 0 94 chr15 54993668 54993901 -48501073 - ID_B1 SINE B4 -8 216 6 9 1004 264 77 0 0 chr15 54993930 54993969 -48501005 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 1004 431 266 94 68 chr15 54994004 54994270 -48500704 - B4 SINE B4 -18 274 2 9 1004 298 319 109 0 chr15 54994886 54995005 -48499969 + LTR33 LTR ERVL 30 161 -354 9 1004 446 306 13 33 chr15 54996218 54996370 -48498604 + RSINE1 SINE B4 2 150 -15 9 1004 1289 113 27 11 chr15 54996613 54996800 -48498174 - B2_Mm2 SINE B2 -5 190 1 9 1004 21 0 0 0 chr15 54997584 54997605 -48497369 + AT_rich Low_complexity Low_complexity 1 21 0 9 1004 25 31 0 0 chr15 54998120 54998152 -48496822 + AT_rich Low_complexity Low_complexity 1 32 0 9 1004 246 32 0 0 chr15 54998163 54998194 -48496780 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 9 1004 1114 51 0 0 chr15 54998195 54998333 -48496641 - B1_Mus2 SINE Alu -6 141 4 9 1004 439 225 24 98 chr15 54998224 54998347 -48496627 - MT2B LTR ERVL -337 264 151 9 1004 300 268 7 28 chr15 54998229 54998371 -48496603 - ORR1B1-int LTR MaLR -755 754 616 9 1004 531 243 35 37 chr15 54998602 54998746 -48496228 + ID_B1 SINE B4 84 224 0 9 1004 391 273 11 22 chr15 54998747 54998837 -48496137 + ID_B1 SINE B4 2 90 -134 9 1004 1978 157 45 6 chr15 54999523 54999876 -48495098 - ORR1B2 LTR MaLR 0 367 1 9 1004 233 145 15 88 chr15 55000003 55000049 -48494925 + T-rich Low_complexity Low_complexity 23 64 0 1 1004 1542 49 27 0 chr15 55000049 55000234 -48494740 - B2_Mm1a SINE B2 -2 191 2 2 1004 233 145 15 88 chr15 55000234 55000255 -48494719 + T-rich Low_complexity Low_complexity 2 22 0 3 1004 359 261 8 75 chr15 55000259 55000379 -48494595 - ID_B1 SINE B4 0 224 113 4 1004 534 290 60 30 chr15 55000819 55001026 -48493948 - ID_B1 SINE B4 -68 224 1 5 1004 260 250 203 0 chr15 55002684 55002748 -48492226 + B4 SINE B4 143 219 -73 6 1004 180 111 0 0 chr15 55002748 55002775 -48492199 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 7 1004 227 345 0 0 chr15 55002782 55002840 -48492134 + ID4_ SINE ID 24 81 -2 8 1004 209 146 21 0 chr15 55002848 55002896 -48492078 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 9 1004 297 309 12 36 chr15 55002938 55003022 -48491952 + B1F SINE Alu 1 82 -67 1 1004 209 161 0 0 chr15 55003048 55003079 -48491895 + (TGGA)n Simple_repeat Simple_repeat 2 32 0 1 1004 381 43 0 0 chr15 55003080 55003127 -48491847 + (CAGG)n Simple_repeat Simple_repeat 1 47 0 1 1004 256 340 45 9 chr15 55003152 55003262 -48491712 + ID_B1 SINE B4 107 220 -4 1 1004 232 342 53 0 chr15 55003429 55003505 -48491469 + ID2 SINE ID 2 81 -2 1 1004 469 237 17 8 chr15 55003540 55003659 -48491315 + PB1D9 SINE Alu 1 120 0 1 1004 294 292 90 0 chr15 55003681 55003770 -48491204 + PB1D7 SINE Alu 7 103 -17 1 1004 288 0 0 0 chr15 55004153 55004185 -48490789 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 1004 398 325 16 32 chr15 55004185 55004309 -48490665 - B1F SINE Alu -10 139 18 1 1004 504 0 0 0 chr15 55005466 55005522 -48489452 + (CTTG)n Simple_repeat Simple_repeat 1 56 0 1 1004 447 179 0 0 chr15 55005552 55005692 -48489282 + CT-rich Low_complexity Low_complexity 2 141 0 2 1004 714 187 0 29 chr15 55005708 55005846 -48489128 - B1_Mur2 SINE Alu -15 134 1 2 1004 364 306 20 10 chr15 55005846 55005945 -48489029 - ID_B1 SINE B4 -38 186 87 2 1004 531 213 30 52 chr15 55006572 55006706 -48488268 - B1F SINE Alu -7 142 12 2 1004 276 30 0 0 chr15 55006804 55006837 -48488137 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1004 377 256 146 29 chr15 55006843 55006980 -48487994 - RSINE1 SINE B4 -10 155 3 2 1004 966 106 112 0 chr15 55007112 55007272 -48487702 + B2_Mm2 SINE B2 2 179 -16 2 1004 315 203 0 0 chr15 55007272 55007341 -48487633 + GA-rich Low_complexity Low_complexity 2 70 0 2 1004 620 226 84 12 chr15 55007543 55007709 -48487265 + L1MB8 LINE L1 4842 5019 -1127 2 1004 335 318 0 0 chr15 55007924 55008012 -48486962 + ID_B1 SINE B4 82 169 -55 2 1004 511 240 150 14 chr15 55008039 55008351 -48486623 + L1MB8 LINE L1 5321 5691 -488 2 1004 249 341 45 11 chr15 55008539 55008628 -48486346 + PB1D7 SINE Alu 1 92 -28 3 1004 330 205 125 25 chr15 55008670 55008790 -48486184 + L1MB8 LINE L1 6035 6166 -12 2 1004 21 0 0 0 chr15 55009076 55009097 -48485877 + AT_rich Low_complexity Low_complexity 1 21 0 3 1004 1101 176 75 0 chr15 55009102 55009301 -48485673 - B3 SINE B2 0 216 3 3 1004 351 113 0 0 chr15 55009810 55009863 -48485111 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 1004 445 304 54 20 chr15 55009864 55010012 -48484962 - RSINE1 SINE B4 -9 156 4 3 1004 252 167 0 0 chr15 55010024 55010072 -48484902 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 3 1004 305 286 38 9 chr15 55010084 55010190 -48484784 - PB1D9 SINE Alu -11 109 1 3 1004 197 0 71 0 chr15 55010261 55010289 -48484685 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 3 1004 1132 66 0 0 chr15 55011060 55011197 -48483777 + B1_Mus2 SINE Alu 1 137 -10 3 1004 251 258 73 82 chr15 55011229 55011339 -48483635 - MLT1A0 LTR MaLR -93 272 164 3 1004 31 26 0 0 chr15 55011365 55011403 -48483571 + AT_rich Low_complexity Low_complexity 1 38 0 4 1004 282 317 78 92 chr15 55011408 55011561 -48483413 - RSINE1 SINE B4 0 165 15 4 1004 567 0 0 0 chr15 55011834 55011897 -48483077 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 4 1004 1009 105 0 0 chr15 55011897 55012050 -48482924 - B2_Mm2 SINE B2 -42 153 1 4 1004 805 209 119 16 chr15 55012852 55013046 -48481928 - B3 SINE B2 0 216 3 4 1004 4444 199 35 71 chr15 55013253 55014307 -48480667 + RMER1B Other Other 50 1065 -1 4 1004 670 297 152 74 chr15 55014523 55014621 -48480353 - MLT1F LTR MaLR -8 540 469 4 1004 2242 106 0 10 chr15 55014621 55014935 -48480039 - RLTR10E LTR ERVK 0 311 1 4 1004 670 297 152 74 chr15 55014935 55015337 -48479637 - MLT1F LTR MaLR -80 468 1 4 1004 656 261 20 0 chr15 55015742 55015895 -48479079 - RSINE1 SINE B4 -9 156 1 4 1004 292 280 19 0 chr15 55015973 55016080 -48478894 + MER5A1 DNA MER1_type 38 146 -20 4 1004 427 234 21 21 chr15 55016087 55016183 -48478791 + ID_B1 SINE B4 84 179 -45 5 1004 893 234 49 30 chr15 55016668 55016686 -48478288 - B3 SINE B2 -8 208 191 5 1004 3327 147 40 192 chr15 55016686 55017577 -48477397 - RMER6A LTR ERVK 0 756 1 5 1004 893 234 49 30 chr15 55017577 55017761 -48477213 - B3 SINE B2 -26 190 2 5 1004 247 181 135 67 chr15 55017806 55017895 -48477079 - L1MB1 LINE L1 -17 6172 6078 5 1004 510 17 0 0 chr15 55018948 55019007 -48475967 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1004 395 224 44 5 chr15 55019030 55019123 -48475851 - B1F SINE Alu -37 112 4 5 1004 337 279 49 8 chr15 55019136 55019259 -48475715 - B1F2 SINE Alu -17 132 5 5 1004 231 36 0 0 chr15 55019752 55019780 -48475194 + (GA)n Simple_repeat Simple_repeat 1 28 0 5 1004 258 254 83 25 chr15 55019793 55019914 -48475060 + B1F SINE Alu 19 146 -3 5 1004 1164 69 7 0 chr15 55020016 55020161 -48474813 + B1_Mm SINE Alu 2 147 0 5 1004 862 294 5 0 chr15 55020250 55020471 -48474503 + ID_B1 SINE B4 2 223 -1 6 1004 359 227 33 22 chr15 55020473 55020563 -48474411 + B3A SINE B2 1 91 -107 6 1004 369 230 61 9 chr15 55021520 55021634 -48473340 + ID_B1 SINE B4 105 224 0 6 1004 962 92 0 0 chr15 55022083 55022225 -48472749 + B1_Mus2 SINE Alu 6 147 0 6 1004 291 85 0 0 chr15 55022494 55022541 -48472433 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 6 1004 2129 182 30 2 chr15 55022874 55023276 -48471698 - MTC LTR MaLR 0 421 9 6 1004 504 284 121 9 chr15 55023345 55023569 -48471405 - L1PB4 LINE L1 -330 5826 5578 6 1004 723 146 8 8 chr15 55023569 55023700 -48471274 - URR1B DNA MER1_type 0 225 95 6 1004 1273 27 0 0 chr15 55023701 55023848 -48471126 + B1_Mm SINE Alu 1 147 0 6 1004 393 192 26 0 chr15 55023870 55023948 -48471026 - URR1B DNA MER1_type -120 105 26 6 1004 314 246 60 17 chr15 55023949 55024065 -48470909 - L1M4 LINE L1 -597 5587 5467 6 1004 293 270 27 0 chr15 55024139 55024213 -48470761 - ID4 SINE ID 0 83 8 7 1004 243 189 0 0 chr15 55024378 55024431 -48470543 + CT-rich Low_complexity Low_complexity 2 54 0 7 1004 766 290 43 10 chr15 55024530 55024739 -48470235 + ID_B1 SINE B4 8 223 -1 7 1004 471 302 16 8 chr15 55025256 55025383 -48469591 - B1F SINE Alu -21 128 1 7 1004 939 296 72 3 chr15 55025472 55025790 -48469184 + MER2 DNA MER2_type 6 345 0 7 1004 183 80 0 0 chr15 55025956 55025981 -48468993 + (TCC)n Simple_repeat Simple_repeat 3 27 0 7 1004 438 326 0 0 chr15 55026093 55026231 -48468743 + ID_B1 SINE B4 85 222 -2 7 1004 794 225 105 40 chr15 55026441 55026836 -48468138 - MT2A LTR ERVL 0 601 24 7 1004 266 264 0 9 chr15 55026836 55026943 -48468031 + C-rich Low_complexity Low_complexity 4 109 0 7 1004 1166 227 62 22 chr15 55027289 55027613 -48467361 + MTE2b LTR MaLR 25 361 -18 7 1004 223 26 77 0 chr15 55027650 55027689 -48467285 + (TTTG)n Simple_repeat Simple_repeat 4 45 0 8 1004 1014 51 80 7 chr15 55027689 55027827 -48467147 - B1_Mus1 SINE Alu 0 148 1 8 1004 233 327 78 10 chr15 55028455 55028557 -48466417 + B4A SINE B4 86 194 -98 8 1004 282 291 127 8 chr15 55028472 55028590 -48466384 + B1_Mur2 SINE Alu 18 149 0 8 1004 222 62 0 0 chr15 55028592 55028624 -48466350 + (A)n Simple_repeat Simple_repeat 1 32 0 8 1004 2018 115 38 9 chr15 55028734 55029066 -48465908 - RLTR14 LTR ERV1 0 382 41 8 1004 2571 187 137 16 chr15 55029066 55029671 -48465303 - RLTR33 LTR ERVK 0 678 1 8 1004 309 51 0 0 chr15 55030210 55030249 -48464725 + (TC)n Simple_repeat Simple_repeat 2 40 0 8 1004 766 181 0 43 chr15 55030269 55030408 -48464566 - B1_Mur3 SINE Alu -16 133 1 8 1004 287 301 0 12 chr15 55030859 55030943 -48464031 + ID4 SINE ID 1 83 0 8 1004 450 222 0 39 chr15 55031008 55031111 -48463863 + Lx7 LINE L1 6826 6924 -772 9 1004 415 219 47 9 chr15 55031680 55031786 -48463188 - ID_B1 SINE B4 -12 212 103 9 1004 310 270 83 45 chr15 55031786 55031812 -48463162 - B1F SINE Alu -12 137 1 9 1004 185 267 21 72 chr15 55032294 55032391 -48462583 - MIRb SINE MIR -147 121 30 9 1004 284 70 0 23 chr15 55032434 55032478 -48462496 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 9 1004 366 23 0 0 chr15 55032556 55032599 -48462375 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 9 1004 344 292 42 0 chr15 55032614 55032710 -48462264 + ID_B1 SINE B4 122 221 -3 9 1004 1394 84 16 5 chr15 55032712 55032904 -48462070 + B2_Mm2 SINE B2 2 195 0 9 1004 248 197 165 38 chr15 55032965 55033044 -48461930 + RSINE1 SINE B4 46 134 -31 9 1004 519 247 107 31 chr15 55033043 55033239 -48461735 + B4A SINE B4 76 286 -6 9 1004 2021 105 50 19 chr15 55033649 55033968 -48461006 - ORR1A4 LTR MaLR 0 329 1 1 1004 392 313 6 58 chr15 55034075 55034231 -48460743 - B1F2 SINE Alu -1 148 1 1 1004 213 259 56 0 chr15 55035264 55035318 -48459656 - ID4_ SINE ID -18 65 9 1 1004 198 71 0 0 chr15 55035320 55035348 -48459626 + (GGTTG)n Simple_repeat Simple_repeat 1 28 0 1 1004 1060 69 7 34 chr15 55035380 55035529 -48459445 - B1_Mm SINE Alu -1 146 2 1 1004 1303 113 27 0 chr15 55035702 55035887 -48459087 + B2_Mm2 SINE B2 2 191 -4 1 1004 513 0 0 0 chr15 55035962 55036019 -48458955 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 1 1004 686 277 0 0 chr15 55036055 55036196 -48458778 - RSINE1 SINE B4 -17 148 8 1 1004 442 293 21 0 chr15 55036238 55036378 -48458596 + B1F SINE Alu 7 149 0 1 1004 183 80 0 0 chr15 55036381 55036406 -48458568 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1004 633 308 68 25 chr15 55036939 55037219 -48457755 + B4 SINE B4 1 292 0 1 1004 3273 190 31 2 chr15 55037286 55037870 -48457104 - Lx5 LINE L1 -304 6746 6146 1 1004 1041 236 70 89 chr15 55037876 55038346 -48456628 + RMER6B LTR ERVK 1 461 0 1 1004 5126 145 29 78 chr15 55038363 55038766 -48456208 - Lx5 LINE L1 -937 6113 5743 1 1004 960 93 58 0 chr15 55038766 55038905 -48456069 - B1_Mus1 SINE Alu 0 148 2 1 1004 5126 148 40 50 chr15 55038905 55039671 -48455303 - Lx5 LINE L1 -135 5742 4944 1 1004 413 237 32 103 chr15 55039740 55039895 -48455079 + ID_B1 SINE B4 81 224 0 1 1004 581 290 60 5 chr15 55040534 55040718 -48454256 + ID_B1 SINE B4 22 215 -9 1 1004 423 0 0 0 chr15 55040746 55040793 -48454181 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1004 447 235 0 0 chr15 55040999 55041118 -48453856 + GA-rich Low_complexity Low_complexity 4 122 0 1 1004 228 284 30 0 chr15 55041242 55041309 -48453665 - MIR SINE MIR -70 192 124 1 1004 1784 138 17 136 chr15 55041535 55041998 -48452976 + RMER17C LTR ERVK 1 408 -2 1 1004 1523 27 31 26 chr15 55042164 55042357 -48452617 - B2_Mm2 SINE B2 0 195 2 1 1004 270 0 0 0 chr15 55042666 55042696 -48452278 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1 1004 733 97 0 43 chr15 55042719 55042859 -48452115 + (TTTC)n Simple_repeat Simple_repeat 1 134 0 1 1004 1138 76 0 14 chr15 55042859 55043006 -48451968 - B1_Mus2 SINE Alu -1 146 2 1 1004 485 298 69 113 chr15 55043040 55043331 -48451643 + B4A SINE B4 1 278 -14 1 1004 203 283 17 0 chr15 55043334 55043394 -48451580 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 1 1004 209 258 0 0 chr15 55043787 55043853 -48451121 + (CAG)n Simple_repeat Simple_repeat 2 67 0 1 1004 383 318 31 37 chr15 55044580 55044721 -48450253 + RSINE1 SINE B4 4 144 -21 1 1004 408 67 0 0 chr15 55044721 55044781 -48450193 + (TCTCTG)n Simple_repeat Simple_repeat 3 62 0 1 1004 383 318 31 37 chr15 55044781 55044802 -48450172 + RSINE1 SINE B4 145 165 0 1 1004 456 160 17 102 chr15 55046095 55046213 -48448761 + PB1D10 SINE Alu 10 117 0 1 1004 1098 171 102 0 chr15 55046262 55046467 -48448507 - URR1A DNA MER1_type 0 226 1 1 1004 768 203 7 0 chr15 55047201 55047339 -48447635 - B1_Mur1 SINE Alu -6 143 5 1 1004 1228 41 0 13 chr15 55047501 55047650 -48447324 - B1_Mus2 SINE Alu 0 147 1 1 1004 532 269 134 5 chr15 55047930 55048124 -48446850 - ID_B1 SINE B4 -5 219 1 1 1004 1834 124 64 61 chr15 55048356 55048405 -48446569 - ORR1A2 LTR MaLR 0 327 287 1 1004 206 32 0 31 chr15 55048405 55048437 -48446537 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1004 1109 67 0 0 chr15 55048439 55048574 -48446400 - B1_Mus2 SINE Alu -11 136 2 1 1004 1834 124 64 61 chr15 55048574 55048847 -48446127 - ORR1A2 LTR MaLR -41 286 1 1 1004 306 312 158 6 chr15 55048850 55049021 -48445953 + Tigger16a DNA Tigger 461 657 -276 1 1004 311 217 0 0 chr15 55049985 55050045 -48444929 + B1F2 SINE Alu 5 64 -85 1 1004 252 333 39 0 chr15 55049986 55050064 -48444910 + B4A SINE B4 91 171 -121 1 125 543 284 80 0 chr15 55050064 55050324 -48444650 - Lx8 LINE L1 -826 6647 6301 1 1005 2036 119 61 6 chr15 55050328 55050674 -48444300 - RLTR33 LTR ERVK 0 678 314 1 1005 195 42 0 0 chr15 55050688 55050712 -48444262 + (GTTTG)n Simple_repeat Simple_repeat 5 28 0 1 1005 1229 116 25 40 chr15 55050721 55050761 -48444213 - B2_Mm2 SINE B2 0 195 158 1 1005 189 0 0 0 chr15 55050761 55050782 -48444192 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1 1005 1229 116 25 40 chr15 55050782 55050939 -48444035 - B2_Mm2 SINE B2 -38 157 1 1 1005 428 139 12 12 chr15 55051677 55051757 -48443217 + PB1D10 SINE Alu 19 98 -19 1 1005 231 232 0 0 chr15 55051821 55051903 -48443071 + (TA)n Simple_repeat Simple_repeat 2 83 0 1 1005 351 266 34 42 chr15 55051971 55052089 -48442885 - PB1D10 SINE Alu 0 117 1 1 1005 719 170 0 43 chr15 55052134 55052275 -48442699 - B1_Mus1 SINE Alu 0 148 14 1 1005 216 0 0 0 chr15 55052435 55052459 -48442515 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1005 1172 68 0 0 chr15 55052459 55052605 -48442369 - B1_Mus2 SINE Alu 0 147 2 1 1005 221 345 0 0 chr15 55053205 55053263 -48441711 + polypyrimidine Low_complexity Low_complexity 3 60 0 1 1005 387 306 46 41 chr15 55053263 55053457 -48441517 - ID_B1 SINE B4 -22 202 8 1 1005 495 101 0 0 chr15 55054202 55054281 -48440693 + (TGGA)n Simple_repeat Simple_repeat 1 79 0 1 1005 22 35 0 0 chr15 55054522 55054551 -48440423 + AT_rich Low_complexity Low_complexity 1 29 0 1 1005 218 330 81 0 chr15 55054748 55054896 -48440078 - MIRm SINE MIR -51 217 57 1 1005 237 271 0 67 chr15 55054942 55055017 -48439957 - B1F SINE Alu -3 146 77 1 1005 868 174 7 0 chr15 55055193 55055342 -48439632 + B1_Mur4 SINE Alu 1 150 0 1 1005 249 330 0 9 chr15 55055343 55055450 -48439524 + GA-rich Low_complexity Low_complexity 1 106 0 1 1005 405 102 0 0 chr15 55055698 55055757 -48439217 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 1005 214 290 0 14 chr15 55056412 55056482 -48438492 - L2b LINE L2 -214 3161 3093 1 1005 1180 116 0 21 chr15 55056794 55056988 -48437986 - RLTR11A2 LTR ERVK 0 527 338 1 1005 258 155 0 49 chr15 55056988 55057049 -48437925 - RLTR11A2 LTR ERVK -469 58 1 1 1005 615 229 17 0 chr15 55057095 55057213 -48437761 + ID_B1 SINE B4 102 221 -3 1 1005 363 96 0 0 chr15 55057331 55057383 -48437591 + (T)n Simple_repeat Simple_repeat 1 52 0 1 1005 579 82 6 0 chr15 55057765 55057869 -48437105 + B1_Mus2 SINE Alu 1 107 -13 1 1005 371 194 0 129 chr15 55057869 55057887 -48437087 + MT2B LTR ERVL 165 270 -331 1 1005 873 102 16 0 chr15 55057951 55058078 -48436896 - B1_Mus1 SINE Alu -19 129 1 1 1005 235 306 39 39 chr15 55058095 55058197 -48436777 + MLT1C LTR MaLR 366 467 0 1 1005 279 0 0 0 chr15 55058404 55058435 -48436539 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1005 670 47 0 0 chr15 55058435 55058521 -48436453 - B1_Mus2 SINE Alu -8 139 54 1 1005 198 0 0 0 chr15 55058729 55058751 -48436223 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 1005 218 375 0 0 chr15 55058934 55059030 -48435944 + L2 LINE L2 2491 2586 -833 1 1005 1130 69 7 0 chr15 55059077 55059221 -48435753 - B1_Mus2 SINE Alu 0 147 3 1 1005 1146 35 35 0 chr15 55059540 55059682 -48435292 - B1_Mus1 SINE Alu 0 148 2 1 1005 333 0 0 0 chr15 55060125 55060162 -48434812 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1005 336 24 0 0 chr15 55060162 55060202 -48434772 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 1005 1287 20 0 0 chr15 55060243 55060390 -48434584 + B1_Mm SINE Alu 1 147 0 1 1005 209 81 15 75 chr15 55060390 55060451 -48434523 + (CAAA)n Simple_repeat Simple_repeat 3 59 0 1 1005 525 159 106 11 chr15 55060860 55060992 -48433982 + B1_Mur1 SINE Alu 5 148 -2 1 1005 541 354 6 0 chr15 55061008 55061183 -48433791 - B3A SINE B2 -16 182 7 1 1005 1055 64 28 0 chr15 55061211 55061352 -48433622 - B1_Mm SINE Alu 0 147 3 1 1005 989 320 98 37 chr15 55061373 55061966 -48433008 - Lx8 LINE L1 -334 7139 6511 1 1005 304 240 180 23 chr15 55062040 55062168 -48432806 - B1F SINE Alu -1 148 1 1 1005 318 294 48 19 chr15 55062522 55062626 -48432348 + B1F SINE Alu 2 108 -41 1 1005 32 0 0 0 chr15 55062634 55062666 -48432308 + AT_rich Low_complexity Low_complexity 1 32 0 1 1005 681 22 0 32 chr15 55063387 55063398 -48431576 - B1_Mm SINE Alu 0 147 139 1 1005 194 0 39 0 chr15 55063398 55063424 -48431550 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1005 681 22 0 32 chr15 55063424 55063507 -48431467 - B1_Mm SINE Alu -9 138 56 1 1005 313 229 148 71 chr15 55064445 55064461 -48430513 + L1MC1 LINE L1 6007 6021 -323 1 1005 758 253 154 8 chr15 55064461 55064708 -48430266 - B4A SINE B4 -8 284 2 1 1005 491 237 141 60 chr15 55064708 55064906 -48430068 + L1MC1 LINE L1 6022 6231 -102 1 1005 2271 157 5 85 chr15 55064987 55065412 -48429562 - ORR1B1 LTR MaLR 0 394 4 1 1005 308 222 0 16 chr15 55065726 55065790 -48429184 - RSINE1 SINE B4 -4 161 99 1 1005 824 206 0 0 chr15 55065944 55066080 -48428894 + B1_Mus1 SINE Alu 1 136 -12 1 1005 340 336 68 49 chr15 55066354 55066625 -48428349 - LTR33C LTR ERVL -341 288 8 1 1005 216 233 16 16 chr15 55066872 55066933 -48428041 + ID_B1 SINE B4 79 139 -85 1 1005 762 60 0 0 chr15 55066951 55067051 -48427923 + (TCCC)n Simple_repeat Simple_repeat 4 103 0 1 1005 1035 87 0 39 chr15 55067067 55067223 -48427751 - B2_Mm2 SINE B2 -43 152 3 1 1005 722 244 67 62 chr15 55067258 55067459 -48427515 + ID_B1 SINE B4 14 216 -8 1 1005 245 29 29 0 chr15 55067459 55067493 -48427481 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1 1005 189 89 52 35 chr15 55067895 55067953 -48427021 + T-rich Low_complexity Low_complexity 4 62 0 1 1005 438 232 198 32 chr15 55068448 55068635 -48426339 - ID_B1 SINE B4 0 224 7 1 1005 1167 238 95 3 chr15 55068838 55069133 -48425841 - MTE2a LTR MaLR 0 379 58 2 1005 289 277 8 89 chr15 55069312 55069435 -48425539 + ID_B1 SINE B4 105 217 -7 2 1005 426 236 236 0 chr15 55069449 55069572 -48425402 + RSINE1 SINE B4 7 158 -7 2 1005 1985 227 79 46 chr15 55069692 55070361 -48424613 - RLTR40 LTR ERVK -39 778 88 2 1005 243 0 0 0 chr15 55070369 55070396 -48424578 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1005 379 161 40 64 chr15 55070396 55070569 -48424405 - RMER17C LTR ERVK -136 274 106 2 1005 279 200 17 0 chr15 55070566 55070626 -48424348 - RLTR40 LTR ERVK -725 92 32 2 1005 644 94 274 0 chr15 55070923 55071029 -48423945 + B1_Mus1 SINE Alu 3 137 -11 2 1005 1040 96 24 6 chr15 55071146 55071313 -48423661 + B2_Mm1t SINE B2 15 184 -9 2 1005 273 57 0 0 chr15 55071314 55071349 -48423625 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 2 1005 223 214 0 67 chr15 55071373 55071433 -48423541 - B3 SINE B2 -115 101 46 2 1005 1193 108 17 6 chr15 55071455 55071632 -48423342 - B2_Mm1t SINE B2 -14 179 1 2 1005 376 268 65 78 chr15 55071860 55072014 -48422960 - RSINE1 SINE B4 0 165 14 2 1005 245 321 58 22 chr15 55072376 55072513 -48422461 - L1M4 LINE L1 -3602 2544 2403 2 1005 1392 86 16 0 chr15 55073192 55073379 -48421595 - B2_Mm2 SINE B2 -5 190 1 2 1005 364 224 25 89 chr15 55073853 55073929 -48421045 - RMER17C LTR ERVK -263 147 80 2 1005 3920 106 62 5 chr15 55073929 55074497 -48420477 - MT2B LTR ERVL -1 600 1 2 1005 364 224 25 89 chr15 55074497 55074577 -48420397 - RMER17C LTR ERVK -331 79 1 2 1005 194 125 21 0 chr15 55074647 55074695 -48420279 + (TTTTTG)n Simple_repeat Simple_repeat 1 49 0 2 1005 1266 34 0 7 chr15 55074695 55074844 -48420130 - B1_Mus1 SINE Alu 0 148 1 2 1005 198 0 0 0 chr15 55075047 55075069 -48419905 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 2 1005 1051 84 0 0 chr15 55075069 55075200 -48419774 - B1_Mus1 SINE Alu -13 135 5 2 1005 198 0 0 0 chr15 55075411 55075433 -48419541 + (TTGG)n Simple_repeat Simple_repeat 4 25 0 2 1005 446 240 19 37 chr15 55075433 55075541 -48419433 - PB1D7 SINE Alu -12 108 3 2 1005 210 71 0 0 chr15 55075632 55075660 -48419314 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 1005 600 248 192 9 chr15 55075708 55075950 -48419024 - B4 SINE B4 -4 288 3 2 1005 959 236 18 28 chr15 55076111 55076329 -48418645 - B3 SINE B2 0 216 1 2 1005 209 33 0 32 chr15 55076489 55076520 -48418454 + (CCCCCA)n Simple_repeat Simple_repeat 3 32 0 2 1005 317 250 389 7 chr15 55077007 55077159 -48417815 + ID_B1 SINE B4 15 224 0 2 1005 992 214 44 22 chr15 55077190 55077419 -48417555 + B4A SINE B4 58 291 -1 2 1005 180 0 0 0 chr15 55078044 55078064 -48416910 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 1005 237 379 14 55 chr15 55078089 55078304 -48416670 - B4A SINE B4 -10 282 77 2 1005 3056 137 48 9 chr15 55078304 55078397 -48416577 - RLTR20D LTR ERVK 0 568 479 2 1005 225 0 0 0 chr15 55078397 55078422 -48416552 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1005 3056 137 48 9 chr15 55078422 55078875 -48416099 - RLTR20D LTR ERVK -90 478 3 2 1005 221 309 0 100 chr15 55078876 55078966 -48416008 - B4A SINE B4 -211 81 1 2 1005 212 229 137 41 chr15 55079082 55079155 -48415819 - B1_Mur1 SINE Alu -4 145 66 2 1005 332 327 10 0 chr15 55079229 55079333 -48415641 - PB1D10 SINE Alu -5 112 8 2 1005 2272 170 20 64 chr15 55079333 55079705 -48415269 + MTC LTR MaLR 1 364 -57 2 1005 1583 62 0 5 chr15 55079705 55079900 -48415074 - B2_Mm2 SINE B2 0 195 2 2 1005 2272 170 20 64 chr15 55079900 55079967 -48415007 + MTC LTR MaLR 365 421 0 2 1005 400 266 0 9 chr15 55080180 55080290 -48414684 - PB1D10 SINE Alu 0 117 9 2 1005 1634 42 0 0 chr15 55080340 55080532 -48414442 + B2_Mm1a SINE B2 2 193 0 2 1005 198 0 0 0 chr15 55081276 55081298 -48413676 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 2 1005 499 179 53 0 chr15 55081298 55081393 -48413581 - B1_Mus2 SINE Alu -13 134 35 2 1005 293 342 6 139 chr15 55081305 55081478 -48413496 - ID_B1 SINE B4 -21 203 54 2 1005 183 250 0 0 chr15 55081496 55081548 -48413426 + C-rich Low_complexity Low_complexity 6 57 0 2 1005 486 0 0 0 chr15 55081695 55081749 -48413225 + (TC)n Simple_repeat Simple_repeat 1 54 0 2 1005 189 245 0 0 chr15 55082055 55082104 -48412870 + C-rich Low_complexity Low_complexity 6 54 0 2 1005 238 200 20 0 chr15 55082111 55082161 -48412813 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1005 326 275 119 0 chr15 55082162 55082271 -48412703 - B4A SINE B4 0 292 171 2 1005 2880 60 18 18 chr15 55082276 55082701 -48412273 - L1Md_F3 LINE L1 0 6584 6196 2 1005 1568 168 84 109 chr15 55082763 55083157 -48411817 - ORR1C2 LTR MaLR 0 384 1 2 1005 477 133 0 0 chr15 55083271 55083369 -48411605 + (TG)n Simple_repeat Simple_repeat 1 98 0 2 1005 469 232 36 0 chr15 55083377 55083489 -48411485 - ID_B1 SINE B4 -9 215 100 2 1005 410 255 28 9 chr15 55083876 55083983 -48410991 + PB1D7 SINE Alu 5 113 -7 2 1005 271 113 38 0 chr15 55084011 55084064 -48410910 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 1005 392 174 10 60 chr15 55084231 55084355 -48410619 + PB1 SINE Alu 20 117 0 2 1005 234 0 0 0 chr15 55084546 55084572 -48410402 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 1005 365 260 0 0 chr15 55085096 55085169 -48409805 + ID_B1 SINE B4 82 154 -70 2 1005 262 289 26 34 chr15 55085481 55085621 -48409353 - MIRb SINE MIR -26 236 108 2 1005 206 200 50 0 chr15 55085768 55085828 -48409146 + (TTG)n Simple_repeat Simple_repeat 1 63 0 2 1005 1088 92 0 0 chr15 55086392 55086534 -48408440 - B1_Mus1 SINE Alu -6 142 1 2 1005 613 125 9 9 chr15 55086573 55086678 -48408296 - B2_Mm1t SINE B2 -85 108 4 2 1005 1069 57 28 0 chr15 55086793 55086934 -48408040 - B1_Mm SINE Alu -1 146 2 2 1005 252 0 0 0 chr15 55087065 55087093 -48407881 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1005 838 152 0 40 chr15 55087104 55087255 -48407719 + B1_Mur4 SINE Alu 6 150 0 2 1005 23 0 0 0 chr15 55087255 55087278 -48407696 + AT_rich Low_complexity Low_complexity 1 23 0 2 1005 420 128 0 0 chr15 55087342 55087420 -48407554 + (TC)n Simple_repeat Simple_repeat 1 78 0 2 1005 198 365 28 0 chr15 55087686 55087793 -48407181 + L2c LINE L2 3204 3313 -74 2 1005 366 242 98 29 chr15 55088138 55088240 -48406734 + ID_B1 SINE B4 109 217 -7 2 1005 243 276 22 44 chr15 55088449 55088540 -48406434 + MTEa LTR MaLR 278 366 -13 2 1005 841 288 5 5 chr15 55088686 55088899 -48406075 + B3 SINE B2 4 216 0 2 1005 251 341 12 0 chr15 55088925 55089010 -48405964 - MLT1H1 LTR MaLR -461 94 9 2 1005 592 245 7 53 chr15 55089422 55089573 -48405401 - B1F SINE Alu -2 147 4 2 1005 519 200 91 0 chr15 55089717 55089827 -48405147 + PB1D7 SINE Alu 1 120 0 2 1005 284 261 102 0 chr15 55090114 55090202 -48404772 + PB1D7 SINE Alu 6 102 -18 2 1005 1274 14 0 13 chr15 55090926 55091075 -48403899 - B1_Mm SINE Alu 0 147 1 2 1005 229 252 83 45 chr15 55091260 55091393 -48403581 - RMER5 LTR ERV1 -2 532 395 2 1005 634 278 23 23 chr15 55091419 55091596 -48403378 + B3A SINE B2 1 177 -21 2 1005 23 0 0 0 chr15 55091631 55091654 -48403320 + AT_rich Low_complexity Low_complexity 1 23 0 2 1005 626 212 129 29 chr15 55091765 55091935 -48403039 - B2_Mm2 SINE B2 -8 187 1 2 1005 611 260 39 0 chr15 55091973 55092127 -48402847 + B3 SINE B2 1 160 -56 2 1005 234 286 148 15 chr15 55092148 55092283 -48402691 - RMER5 LTR ERV1 -336 198 46 2 1005 288 185 115 59 chr15 55092694 55092793 -48402181 + B1F SINE Alu 13 120 0 2 1005 746 309 22 40 chr15 55093341 55093582 -48401392 + B4 SINE B4 2 243 -49 2 1005 3692 51 21 25 chr15 55093582 55094066 -48400908 + RLTR45 LTR ERVK 1 482 0 2 1005 746 309 22 40 chr15 55094066 55094097 -48400877 + B4 SINE B4 244 269 -23 2 1005 333 73 53 35 chr15 55094098 55094155 -48400819 - U7 snRNA snRNA -2 61 4 2 1005 3454 157 121 17 chr15 55094275 55094461 -48400513 - RLTR25B LTR ERVK -206 822 626 2 1005 225 0 0 0 chr15 55094461 55094486 -48400488 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 1005 3454 157 121 17 chr15 55094486 55095044 -48399930 - RLTR25B LTR ERVK -403 625 2 2 1005 536 214 39 72 chr15 55095076 55095106 -48399868 + RMER4B LTR ERVK 1 32 -434 2 1005 1255 41 0 0 chr15 55095106 55095253 -48399721 - B1_Mus2 SINE Alu 0 147 1 2 1005 968 228 54 60 chr15 55095253 55095471 -48399503 + RMER4B LTR ERVK 33 267 -318 2 1005 405 0 0 0 chr15 55095471 55095516 -48399458 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1005 968 258 87 32 chr15 55095516 55095685 -48399289 + RMER4B LTR ERVK 268 434 -151 2 1005 956 172 71 57 chr15 55095821 55096031 -48398943 - B3 SINE B2 -3 213 1 2 1005 389 288 0 67 chr15 55096051 55096200 -48398774 - ID_B1 SINE B4 -1 223 85 2 1005 490 296 23 102 chr15 55096283 55096324 -48398650 + RSINE1 SINE B4 3 41 -124 2 1005 1697 168 14 84 chr15 55096324 55096752 -48398222 + RMER10B LTR ERVL 1 398 0 2 1005 490 296 23 102 chr15 55096752 55096887 -48398087 + RSINE1 SINE B4 42 165 0 2 1005 1422 165 94 30 chr15 55098296 55098658 -48396316 + RMER10B LTR ERVL 14 398 0 2 1005 282 271 93 9 chr15 55098667 55098775 -48396199 + PB1D10 SINE Alu 1 117 0 2 1005 952 98 20 0 chr15 55098778 55098931 -48396043 + B2_Mm2 SINE B2 35 190 -5 2 1005 224 213 0 0 chr15 55098933 55098980 -48395994 + A-rich Low_complexity Low_complexity 2 48 0 2 1005 414 233 48 0 chr15 55099290 55099393 -48395581 - PB1D10 SINE Alu -1 116 9 2 1005 987 163 5 5 chr15 55099447 55099632 -48395342 - RMER10B LTR ERVL -212 186 2 2 1005 234 0 0 0 chr15 55099639 55099665 -48395309 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 1005 225 0 0 0 chr15 55100169 55100194 -48394780 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 1005 1243 63 11 6 chr15 55100751 55100926 -48394048 + B2_Mm2 SINE B2 1 176 -19 2 1005 842 49 0 32 chr15 55100961 55101087 -48393887 + B2_Mm1a SINE B2 72 193 0 3 1005 688 148 39 0 chr15 55101314 55101442 -48393532 + B1_Mur2 SINE Alu 6 138 -11 3 1005 203 179 0 0 chr15 55101461 55101500 -48393474 + A-rich Low_complexity Low_complexity 1 39 0 3 1005 225 0 0 0 chr15 55102998 55103023 -48391951 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1005 4348 61 31 7 chr15 55103289 55103837 -48391137 - LTRIS2 LTR ERV1 0 564 4 3 1005 519 287 26 3 chr15 55103934 55104078 -48390896 - ID_B1 SINE B4 -64 228 82 3 1005 801 193 20 20 chr15 55104081 55104229 -48390745 - B1F SINE Alu -1 148 1 3 1005 1951 186 75 33 chr15 55104360 55104788 -48390186 + RLTR41 LTR ERV1 1 446 0 3 1005 241 330 32 32 chr15 55104875 55104969 -48390005 + ID_B1 SINE B4 81 174 -50 3 1005 278 174 14 28 chr15 55105208 55105279 -48389695 + B4A SINE B4 2 71 -221 3 1005 7650 184 22 15 chr15 55105298 55106872 -48388102 + Lx5 LINE L1 5452 7044 -6 3 1005 1085 115 73 0 chr15 55106890 55107055 -48387919 - B2_Mm2 SINE B2 -18 177 1 3 1005 1002 41 0 0 chr15 55107103 55107226 -48387748 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 3 1005 708 267 44 15 chr15 55107389 55107594 -48387380 + B4 SINE B4 80 290 -2 3 1005 242 271 132 46 chr15 55107731 55107882 -48387092 + MLT1J2 LTR MaLR 265 428 -20 3 1005 306 73 0 0 chr15 55107932 55107973 -48387001 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1005 782 286 21 61 chr15 55108629 55108908 -48386066 + B4A SINE B4 4 271 -21 3 1005 1154 54 0 0 chr15 55108967 55109114 -48385860 - B1_Mus2 SINE Alu 0 147 1 3 1005 34 0 0 0 chr15 55109593 55109627 -48385347 + AT_rich Low_complexity Low_complexity 1 34 0 3 1005 414 285 82 50 chr15 55109984 55110143 -48384831 + B4A SINE B4 2 165 -127 3 1005 485 223 96 48 chr15 55110163 55110309 -48384665 + B4A SINE B4 122 274 -18 3 1005 658 244 45 25 chr15 55110406 55110608 -48384366 - B3 SINE B2 -10 206 1 3 1005 1160 68 0 0 chr15 55111063 55111209 -48383765 - B1_Mus2 SINE Alu 0 147 2 3 1005 787 229 119 45 chr15 55111312 55111664 -48383310 + RMER17C LTR ERVK 1 378 -32 3 1005 276 178 0 0 chr15 55112920 55112993 -48381981 + T-rich Low_complexity Low_complexity 1 73 0 3 1005 1003 81 81 0 chr15 55112994 55113130 -48381844 - B1_Mus1 SINE Alu 0 148 2 3 1005 232 321 42 59 chr15 55113456 55113575 -48381399 + LTR16A1 LTR ERVL 333 449 -7 3 1005 369 0 0 0 chr15 55113737 55113778 -48381196 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1005 849 89 8 0 chr15 55113778 55113901 -48381073 - B1_Mus1 SINE Alu -4 144 21 3 1005 292 247 0 114 chr15 55113808 55113913 -48381061 - MT2B LTR ERVL -337 264 172 3 1005 759 206 21 0 chr15 55114020 55114161 -48380813 - B1_Mur2 SINE Alu -1 148 5 3 1005 347 309 103 47 chr15 55114201 55114435 -48380539 - L1M5 LINE L1 -416 5757 5511 3 1005 1042 248 20 71 chr15 55114435 55114830 -48380144 + RMER17C LTR ERVK 1 375 -35 3 1005 253 283 51 61 chr15 55114963 55115061 -48379913 - B1_Mm SINE Alu 0 147 51 3 1005 27 0 0 0 chr15 55115999 55116026 -48378948 + AT_rich Low_complexity Low_complexity 1 27 0 3 1005 611 274 6 32 chr15 55116146 55116304 -48378670 + MTEa LTR MaLR 1 154 -225 3 1005 376 311 151 11 chr15 55116563 55116742 -48378232 + MER20 DNA MER1_type 16 219 0 3 1005 933 56 11 182 chr15 55116775 55116951 -48378023 - B1_Mus2 SINE Alu 0 147 2 3 1005 999 166 37 21 chr15 55116976 55117167 -48377807 - B2_Mm2 SINE B2 -1 194 1 3 1005 395 313 76 8 chr15 55117324 55117456 -48377518 + RSINE1 SINE B4 9 149 -16 3 1005 252 0 0 0 chr15 55117466 55117494 -48377480 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 1005 333 291 35 26 chr15 55117536 55117649 -48377325 + PB1D7 SINE Alu 7 120 0 3 1005 300 265 14 14 chr15 55118125 55118194 -48376780 + tRNA-Ala-GCY_ tRNA tRNA 2 70 -5 3 1005 392 264 0 0 chr15 55118234 55118321 -48376653 - ORR1E LTR MaLR -269 90 4 3 1005 1041 45 67 7 chr15 55118346 55118481 -48376493 - B1_Mm SINE Alu 0 147 5 3 1005 216 318 82 0 chr15 55118713 55118798 -48376176 - PB1D9 SINE Alu -10 110 19 3 1005 5362 146 76 15 chr15 55119783 55120823 -48374151 - RLTR25A LTR ERVK 0 1103 1 3 1005 1055 23 8 8 chr15 55120921 55121052 -48373922 - B1_Mm SINE Alu -16 131 1 3 1005 216 0 0 0 chr15 55121213 55121237 -48373737 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 1005 362 266 51 19 chr15 55121265 55121422 -48373552 - ORR1D2 LTR MaLR -6 364 203 3 1005 1104 62 0 27 chr15 55121422 55121570 -48373404 + B1_Mm SINE Alu 4 147 0 3 1005 390 125 0 0 chr15 55121570 55121650 -48373324 + (A)n Simple_repeat Simple_repeat 1 80 0 3 1005 513 316 88 10 chr15 55121650 55121842 -48373132 - ORR1D2 LTR MaLR -153 217 11 3 1005 360 0 0 0 chr15 55121863 55121903 -48373071 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1005 240 350 0 36 chr15 55121933 55122016 -48372958 - RSINE1 SINE B4 -43 122 43 3 1005 463 229 36 58 chr15 55122070 55122209 -48372765 + B1_Mur4 SINE Alu 2 137 -13 3 1005 306 0 0 0 chr15 55122383 55122417 -48372557 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 1005 351 0 0 0 chr15 55122417 55122455 -48372519 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1005 272 292 0 27 chr15 55122622 55122696 -48372278 - B4A SINE B4 -220 72 1 3 1005 21 0 0 0 chr15 55122976 55122997 -48371977 + AT_rich Low_complexity Low_complexity 1 21 0 3 1005 1000 77 62 0 chr15 55123587 55123717 -48371257 - B1_Mus2 SINE Alu -9 138 1 3 1005 330 26 0 0 chr15 55123815 55123854 -48371120 + (CAAA)n Simple_repeat Simple_repeat 4 42 0 3 1005 574 168 44 81 chr15 55123854 55123990 -48370984 - B1_Mur3 SINE Alu -18 131 1 3 1005 341 228 25 50 chr15 55123993 55124005 -48370969 - ID_B1 SINE B4 -1 223 214 3 1005 230 0 33 0 chr15 55124005 55124035 -48370939 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1005 341 228 25 50 chr15 55124035 55124142 -48370832 - ID_B1 SINE B4 -11 213 107 3 1005 1224 48 0 0 chr15 55124183 55124328 -48370646 - B1_Mus2 SINE Alu -1 146 2 3 1005 1313 96 40 0 chr15 55124430 55124607 -48370367 + B2_Mm2 SINE B2 3 186 -9 3 1005 915 219 44 19 chr15 55124675 55124880 -48370094 - B3 SINE B2 -5 211 2 3 1005 984 62 0 0 chr15 55125355 55125483 -48369491 + (TTCTC)n Simple_repeat Simple_repeat 4 131 0 3 1005 1153 37 0 0 chr15 55125486 55125621 -48369353 - B1_Mus2 SINE Alu -12 135 1 3 1005 256 94 89 54 chr15 55125642 55125698 -48369276 - Lx7 LINE L1 0 7696 7639 3 1005 225 0 0 0 chr15 55125797 55125822 -48369152 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 1005 739 239 139 25 chr15 55126046 55126364 -48368610 - ORR1D1 LTR MaLR -13 357 1 3 1005 522 98 0 0 chr15 55126449 55126531 -48368443 + (TG)n Simple_repeat Simple_repeat 2 83 0 3 1005 315 295 38 0 chr15 55127390 55127495 -48367479 + RSINE1 SINE B4 4 112 -53 3 1005 28 0 0 0 chr15 55127588 55127616 -48367358 + AT_rich Low_complexity Low_complexity 1 28 0 3 1005 27 29 0 0 chr15 55127656 55127690 -48367284 + AT_rich Low_complexity Low_complexity 1 34 0 3 1005 477 90 0 0 chr15 55127754 55127821 -48367153 + (GA)n Simple_repeat Simple_repeat 2 68 0 3 1005 556 289 0 27 chr15 55127955 55128101 -48366873 - ID_B1 SINE B4 -2 222 81 3 1005 539 144 43 35 chr15 55128146 55128261 -48366713 - B1_Mur2 SINE Alu 0 149 34 3 1005 289 231 31 0 chr15 55128258 55128323 -48366651 - B3 SINE B2 -34 182 116 3 1005 333 326 7 79 chr15 55128474 55128614 -48366360 - B3 SINE B2 -85 131 2 3 1005 286 242 30 0 chr15 55128889 55128955 -48366019 - ID4_ SINE ID -14 69 2 3 1005 507 299 143 93 chr15 55129200 55129365 -48365609 - B4A SINE B4 -18 274 98 3 1005 791 171 27 7 chr15 55129365 55129512 -48365462 - B1_Mur4 SINE Alu 0 150 1 3 1005 507 299 143 93 chr15 55129512 55129604 -48365370 - B4A SINE B4 -195 97 4 3 1005 332 262 0 36 chr15 55130019 55130102 -48364872 + ID_B1 SINE B4 128 207 -17 3 1005 269 158 35 0 chr15 55130135 55130192 -48364782 + CT-rich Low_complexity Low_complexity 4 62 0 3 1005 453 36 0 0 chr15 55130328 55130383 -48364591 + (TATATG)n Simple_repeat Simple_repeat 4 58 0 3 1005 1066 43 0 0 chr15 55130383 55130523 -48364451 - B2_Mm2 SINE B2 -54 141 2 3 1005 24 0 0 0 chr15 55130929 55130953 -48364021 + AT_rich Low_complexity Low_complexity 1 24 0 3 1005 220 340 30 10 chr15 55132129 55132230 -48362744 - PB1D7 SINE Alu -12 108 6 3 1005 1395 95 5 0 chr15 55132232 55132422 -48362552 - B2_Mm2 SINE B2 -4 191 1 3 1005 519 31 0 0 chr15 55132422 55132487 -48362487 + (CATTT)n Simple_repeat Simple_repeat 1 65 0 3 1005 1415 82 6 0 chr15 55132487 55132670 -48362304 - B2_Mm2 SINE B2 -11 184 1 3 1005 294 167 45 15 chr15 55133457 55133524 -48361450 - MTD LTR MaLR -45 376 308 3 1005 551 126 170 9 chr15 55133502 55133614 -48361360 - MTD LTR MaLR -285 134 5 3 1005 697 286 84 0 chr15 55133764 55133967 -48361007 - ID_B1 SINE B4 -3 221 2 3 1005 264 326 82 22 chr15 55135049 55135184 -48359790 + L1_Rod LINE L1 5705 5847 0 3 1005 830 49 194 8 chr15 55135205 55135329 -48359645 + B1_Mus2 SINE Alu 1 147 0 3 1005 193 0 94 0 chr15 55135331 55135363 -48359611 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1005 1612 47 0 15 chr15 55135383 55135578 -48359396 + B2_Mm1t SINE B2 2 193 0 3 1005 252 0 0 0 chr15 55135773 55135801 -48359173 + (TC)n Simple_repeat Simple_repeat 2 29 0 3 1005 407 198 196 10 chr15 55136047 55136149 -48358825 + B3 SINE B2 96 216 0 3 1005 180 0 0 0 chr15 55136449 55136469 -48358505 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 1005 975 66 64 28 chr15 55136712 55136853 -48358121 - B1_Mm SINE Alu 0 147 2 4 1005 982 117 0 0 chr15 55136996 55137133 -48357841 + B1_Mus1 SINE Alu 5 141 -7 4 1005 321 242 77 0 chr15 55137333 55137424 -48357550 + PB1D7 SINE Alu 23 120 0 4 1005 511 197 147 42 chr15 55137529 55137672 -48357302 - B4A SINE B4 0 292 135 4 1005 414 275 7 55 chr15 55140625 55140771 -48354203 - ID_B1 SINE B4 -6 218 80 4 1005 496 226 80 0 chr15 55141223 55141360 -48353614 - B1F1 SINE Alu -1 148 1 4 1005 321 176 40 90 chr15 55141397 55141497 -48353477 - L1MB8 LINE L1 -27 6151 6057 4 1005 630 267 6 64 chr15 55141504 55141676 -48353298 + B3A SINE B2 10 171 -27 4 1005 1186 61 0 0 chr15 55141700 55141847 -48353127 - B1_Mus1 SINE Alu 0 148 2 4 1005 245 326 11 0 chr15 55141966 55142055 -48352919 - L1ME1 LINE L1 -246 5933 5844 4 1005 186 43 0 0 chr15 55142541 55142564 -48352410 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1005 255 61 0 0 chr15 55143033 55143066 -48351908 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1005 277 253 20 59 chr15 55143837 55143938 -48351036 + CT-rich Low_complexity Low_complexity 2 98 0 4 1005 518 264 76 7 chr15 55144095 55144240 -48350734 - RSINE1 SINE B4 -2 163 9 4 1005 455 269 52 0 chr15 55144257 55144391 -48350583 - B1F SINE Alu -8 141 1 4 1005 225 0 0 0 chr15 55145120 55145145 -48349829 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1005 1000 281 15 25 chr15 55145185 55145459 -48349515 - B4 SINE B4 -20 272 2 4 1005 362 317 0 9 chr15 55146110 55146215 -48348759 + (TG)n Simple_repeat Simple_repeat 1 104 0 4 1005 448 303 90 50 chr15 55146215 55146493 -48348481 - B4A SINE B4 0 292 4 4 1005 211 210 11 80 chr15 55146510 55146598 -48348376 + (CAAA)n Simple_repeat Simple_repeat 2 83 0 4 1005 1931 108 43 0 chr15 55146710 55147015 -48347959 - L1_Mus3 LINE L1 -6 6632 6315 4 1005 25 31 0 0 chr15 55147637 55147669 -48347305 + AT_rich Low_complexity Low_complexity 1 32 0 4 1005 441 179 0 0 chr15 55147694 55147778 -48347196 + T-rich Low_complexity Low_complexity 1 84 0 4 1005 1143 76 0 0 chr15 55147778 55147923 -48347051 - B1_Mus2 SINE Alu 0 147 3 4 1005 970 126 36 52 chr15 55147926 55148118 -48346856 - B2_Mm2 SINE B2 -1 194 6 4 1005 536 268 29 44 chr15 55148167 55148501 -48346473 - Lx8 LINE L1 -1390 6070 5727 4 1005 225 0 0 0 chr15 55149292 55149317 -48345657 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1005 241 176 30 90 chr15 55149733 55149833 -48345141 + Lx4B LINE L1 6963 7056 -2 4 1005 462 287 8 8 chr15 55150314 55150444 -48344530 - ID_B1 SINE B4 -7 217 88 4 1005 435 214 126 0 chr15 55152461 55152564 -48342410 + PB1D10 SINE Alu 1 116 -1 4 1005 765 208 0 0 chr15 55152568 55152698 -48342276 + B1_Mur4 SINE Alu 1 130 -20 4 1005 636 238 40 80 chr15 55152741 55152942 -48342032 + B3A SINE B2 2 194 -4 4 1005 1300 85 23 0 chr15 55153366 55153542 -48341432 + B2_Mm2 SINE B2 2 181 -14 4 1005 418 66 381 11 chr15 55153570 55153676 -48341298 + B2_Mm2 SINE B2 47 190 -5 4 1005 255 316 25 17 chr15 55153786 55153905 -48341069 - L1MB8 LINE L1 -1 6177 6058 4 1005 704 115 0 9 chr15 55154303 55154417 -48340557 + (AGGGGG)n Simple_repeat Simple_repeat 4 116 0 4 1005 22 35 0 0 chr15 55154747 55154776 -48340198 + AT_rich Low_complexity Low_complexity 1 29 0 4 1005 586 249 164 21 chr15 55154943 55155132 -48339842 - B3 SINE B2 0 216 1 4 1005 229 247 0 20 chr15 55155513 55155612 -48339362 + (CATATA)n Simple_repeat Simple_repeat 2 98 0 4 1005 258 219 127 34 chr15 55155984 55156102 -48338872 + L1M5 LINE L1 5620 5748 -376 4 1005 940 235 73 12 chr15 55156445 55156691 -48338283 - Lx7 LINE L1 -284 7412 7152 4 1005 954 249 41 58 chr15 55156693 55157070 -48337904 + MTE2a LTR MaLR 30 419 0 4 1005 735 262 89 28 chr15 55157221 55157468 -48337506 + RLTR18 LTR ERVK 355 616 0 4 1005 238 268 0 0 chr15 55157468 55157538 -48337436 + MER53 DNA hAT 88 157 -36 4 1005 1181 81 0 0 chr15 55157540 55157688 -48337286 + B1_Mus1 SINE Alu 1 148 0 4 1005 2846 61 0 3 chr15 55157981 55158328 -48336646 + ORR1A1 LTR MaLR 1 346 0 4 1005 210 329 12 12 chr15 55158708 55158791 -48336183 + CT-rich Low_complexity Low_complexity 2 84 0 4 1005 196 316 13 13 chr15 55158869 55158946 -48336028 + L3b LINE CR1 63 139 -343 4 1005 567 0 0 0 chr15 55159171 55159234 -48335740 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 4 1005 810 169 0 27 chr15 55159237 55159420 -48335554 + CT-rich Low_complexity Low_complexity 2 179 0 4 1005 227 263 85 57 chr15 55159428 55159569 -48335405 - Lx6 LINE L1 -6 7454 7310 4 1005 984 250 134 86 chr15 55159555 55159736 -48335238 - Lx7 LINE L1 -209 7487 7306 4 1005 2591 43 12 6 chr15 55159736 55160061 -48334913 - L1Md_F2 LINE L1 -1 6581 6255 4 1005 984 250 134 86 chr15 55160061 55160365 -48334609 - Lx7 LINE L1 -391 7305 6979 4 1005 654 264 0 0 chr15 55160365 55160509 -48334465 - B1_Mur1 SINE Alu -5 144 1 4 1005 510 281 7 0 chr15 55161159 55161298 -48333676 - B1_Mur2 SINE Alu 0 149 10 4 1005 219 103 0 0 chr15 55161423 55161462 -48333512 + (T)n Simple_repeat Simple_repeat 1 39 0 4 1005 368 308 16 8 chr15 55161597 55161718 -48333256 + MER58A DNA MER1_type 82 203 -21 4 1005 1100 92 0 0 chr15 55163172 55163313 -48331661 - B1_Mus1 SINE Alu -6 142 2 4 1005 7612 57 2 14 chr15 55163332 55164312 -48330662 - L1Md_F2 LINE L1 0 6582 5650 4 1005 393 168 30 15 chr15 55164785 55164918 -48330056 + GA-rich Low_complexity Low_complexity 1 135 0 4 1005 354 98 0 0 chr15 55165675 55165726 -48329248 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1005 1981 169 60 18 chr15 55166671 55167052 -48327922 - MTD LTR MaLR 0 419 23 4 1005 776 262 0 23 chr15 55167922 55168098 -48326876 - B3A SINE B2 0 198 27 4 1005 198 0 0 0 chr15 55168098 55168120 -48326854 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1005 1183 69 14 0 chr15 55168120 55168265 -48326709 - B1_Mus2 SINE Alu 0 147 1 4 1005 328 38 57 0 chr15 55168543 55168596 -48326378 + (TTAA)n Simple_repeat Simple_repeat 1 56 0 4 1005 7016 152 12 16 chr15 55168596 55169723 -48325251 - Lx4B LINE L1 -16 7042 5920 4 1005 1533 137 66 0 chr15 55170366 55170607 -48324367 + ORR1A2 LTR MaLR 1 257 -70 4 1005 474 346 28 70 chr15 55170707 55171095 -48323879 - MTEa LTR MaLR -3 376 5 4 1005 234 266 96 52 chr15 55171852 55171987 -48322987 + MER103 DNA DNA 7 147 -19 4 1005 810 239 10 71 chr15 55172039 55172257 -48322717 - B3 SINE B2 -8 187 1 4 1005 553 237 50 14 chr15 55174289 55174430 -48320544 - B1F1 SINE Alu -2 147 2 4 1005 333 235 0 0 chr15 55175635 55175703 -48319271 - RMER15 LTR ERVL -105 470 403 4 1005 1225 68 0 0 chr15 55176076 55176224 -48318750 - B1_Mus1 SINE Alu 0 148 1 4 1005 445 283 76 23 chr15 55176913 55177177 -48317797 - L1M5 LINE L1 -3187 2959 2682 4 1005 427 306 22 7 chr15 55178124 55178262 -48316712 + B1F1 SINE Alu 1 140 -9 4 1005 326 286 13 0 chr15 55179371 55179448 -48315526 - 5S rRNA rRNA -33 88 11 4 1005 488 303 86 15 chr15 55179619 55179817 -48315157 + MER58A DNA MER1_type 13 224 0 4 1005 359 265 183 19 chr15 55180120 55180224 -48314750 + B1F SINE Alu 1 121 -28 4 1005 248 161 16 0 chr15 55180308 55180370 -48314604 + CT-rich Low_complexity Low_complexity 2 64 0 4 1005 622 264 0 8 chr15 55180370 55180500 -48314474 - ID_B1 SINE B4 -14 210 82 4 125 2150 141 52 44 chr15 55181050 55181382 -48313592 - ORR1B2 LTR MaLR 0 367 32 4 1006 1344 102 10 36 chr15 55181382 55181575 -48313399 - B2_Mm2 SINE B2 -6 189 2 4 1006 2150 141 52 44 chr15 55181575 55181606 -48313368 - ORR1B2 LTR MaLR -336 31 1 4 1006 724 74 19 0 chr15 55181720 55181828 -48313146 + (TG)n Simple_repeat Simple_repeat 1 110 0 4 1006 451 294 142 49 chr15 55181848 55181971 -48313003 - B4 SINE B4 -17 275 132 4 1006 198 0 0 0 chr15 55181971 55181993 -48312981 + (TCTCTG)n Simple_repeat Simple_repeat 1 22 0 4 1006 451 294 142 49 chr15 55181993 55182116 -48312858 - B4 SINE B4 -161 131 6 4 1006 764 266 68 103 chr15 55182579 55182948 -48312026 - ORR1E LTR MaLR -3 356 1 4 1006 252 0 0 0 chr15 55182971 55182999 -48311975 + (CAAA)n Simple_repeat Simple_repeat 4 31 0 4 1006 441 286 72 38 chr15 55183098 55183327 -48311647 + MER106B DNA MER1_type 884 1059 0 4 1006 195 42 0 0 chr15 55183853 55183877 -48311097 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 1006 701 292 93 45 chr15 55183895 55184185 -48310789 - MER2 DNA MER2_type -1 344 41 4 1006 297 0 0 0 chr15 55184681 55184714 -48310260 + (A)n Simple_repeat Simple_repeat 1 33 0 4 1006 2811 162 19 38 chr15 55185218 55185750 -48309224 - RLTR20B3 LTR ERVK -55 522 1 4 1006 402 21 0 0 chr15 55185874 55185921 -48309053 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 1006 342 0 0 0 chr15 55185921 55185958 -48309016 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1006 486 0 0 0 chr15 55185958 55186011 -48308963 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 1006 5381 194 71 11 chr15 55186307 55186421 -48308553 - Lx5 LINE L1 -5 7045 6921 4 1006 495 0 0 0 chr15 55186421 55186476 -48308498 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1006 5381 194 71 11 chr15 55186476 55187462 -48307512 - Lx5 LINE L1 -130 6920 5881 4 1006 423 277 27 3 chr15 55187462 55187582 -48307392 - B1F SINE Alu -25 124 1 4 1006 295 309 81 75 chr15 55187582 55187648 -48307326 - ID SINE ID -144 80 14 4 1006 198 208 130 19 chr15 55187689 55187743 -48307231 - L3 LINE CR1 -287 4202 4143 5 1006 549 0 0 0 chr15 55188002 55188063 -48306911 + (TC)n Simple_repeat Simple_repeat 1 61 0 5 1006 240 275 170 100 chr15 55188242 55188658 -48306316 - MLT2B1 LTR ERVL -31 525 14 5 1006 709 140 0 0 chr15 55188760 55188867 -48306107 + B2_Mm2 SINE B2 1 107 -88 5 1006 267 268 13 48 chr15 55189294 55189398 -48305576 - L1MD LINE L1 -1537 4609 4505 5 1006 227 259 161 0 chr15 55189719 55189800 -48305174 - PB1D7 SINE Alu -1 119 26 5 1006 296 286 0 0 chr15 55190061 55190138 -48304836 + ID4_ SINE ID 5 81 -2 5 1006 6367 102 31 20 chr15 55190700 55190714 -48304260 - Lx3A LINE L1 -2 6979 6967 5 1006 459 0 0 0 chr15 55190714 55190765 -48304209 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 5 1006 6367 102 31 20 chr15 55190765 55191677 -48303297 - Lx3A LINE L1 -15 6966 6043 5 1006 2548 253 68 44 chr15 55191743 55192402 -48302572 - Lx8 LINE L1 -75 7398 6711 5 1006 219 36 0 0 chr15 55192402 55192430 -48302544 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 5 1006 1127 74 0 0 chr15 55192430 55192565 -48302409 - B1_Mus1 SINE Alu -13 135 1 5 1006 2548 253 68 44 chr15 55192565 55192698 -48302276 - Lx8 LINE L1 -763 6710 6587 5 1006 396 0 0 0 chr15 55192853 55192897 -48302077 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1006 331 247 20 10 chr15 55193268 55193366 -48301608 + HAL1-2a_MD LINE L1 2361 2459 -565 5 1006 441 0 0 0 chr15 55194544 55194593 -48300381 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1006 572 73 12 0 chr15 55195220 55195302 -48299672 + (TTCC)n Simple_repeat Simple_repeat 2 84 0 5 1006 603 74 0 0 chr15 55195359 55195440 -48299534 + (CAATC)n Simple_repeat Simple_repeat 3 83 0 5 1006 1157 296 25 10 chr15 55195443 55195757 -48299217 - RCHARR1 DNA MER1_type -528 446 128 5 1006 574 267 98 83 chr15 55196001 55196423 -48298551 + L1MCa LINE L1 920 1458 -4959 5 1006 561 193 7 14 chr15 55196434 55196576 -48298398 + CT-rich Low_complexity Low_complexity 3 143 0 5 1006 373 247 25 0 chr15 55196601 55196682 -48298292 - ID4 SINE ID 0 83 1 5 1006 256 275 0 28 chr15 55197834 55197905 -48297069 - RSINE1 SINE B4 -31 134 66 5 1006 2233 92 84 51 chr15 55197921 55198277 -48296697 - Lx LINE L1 -6 6648 6281 5 1006 731 174 7 29 chr15 55198284 55198420 -48296554 + B1_Mus2 SINE Alu 15 147 0 5 1006 183 317 91 55 chr15 55199423 55199440 -48295534 + MER5A DNA MER1_type 76 90 -99 5 1006 2316 129 49 44 chr15 55199440 55199805 -48295169 - ORR1B2 LTR MaLR 0 367 1 5 1006 183 317 91 55 chr15 55199805 55199872 -48295102 + MER5A DNA MER1_type 91 156 -33 5 1006 645 278 7 0 chr15 55199872 55200016 -48294958 + B1_Mur1 SINE Alu 2 146 -3 5 1006 183 317 91 55 chr15 55200016 55200040 -48294934 + MER5A DNA MER1_type 157 188 -1 5 1006 4486 6 0 0 chr15 55200185 55200651 -48294323 - L1Md_T LINE L1 0 6582 6117 5 1006 1022 129 0 6 chr15 55200669 55200825 -48294149 - ORR1B2 LTR MaLR -52 315 161 5 1006 614 183 11 11 chr15 55200827 55200941 -48294033 - B1_Mus2 SINE Alu 0 120 13 5 1006 391 240 17 96 chr15 55200850 55200965 -48294009 - MT2B LTR ERVL -343 258 153 5 1006 252 0 0 0 chr15 55201383 55201411 -48293563 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 1006 243 255 184 0 chr15 55201815 55201913 -48293061 - L2b LINE L2 -5 3370 3255 5 1006 413 243 73 65 chr15 55203198 55203321 -48291653 - B1F SINE Alu -6 143 20 5 1006 886 224 0 0 chr15 55203528 55203675 -48291299 - B1_Mur1 SINE Alu -2 147 1 5 1006 412 291 36 16 chr15 55203860 55204020 -48290954 - L1MA4 LINE L1 -376 5924 5779 5 1006 450 0 0 0 chr15 55204368 55204418 -48290556 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1006 465 19 0 0 chr15 55204579 55204633 -48290341 + (TCCCC)n Simple_repeat Simple_repeat 3 56 0 5 1006 657 0 0 0 chr15 55204633 55204706 -48290268 + (TTTC)n Simple_repeat Simple_repeat 2 74 0 5 1006 888 181 322 67 chr15 55204713 55204968 -48290006 - ORR1C1 LTR MaLR -58 320 1 5 1006 402 136 84 24 chr15 55204968 55205051 -48289923 - ORR1C1-int LTR MaLR 0 1509 1422 5 1006 1437 295 106 49 chr15 55205164 55206019 -48288955 - L1MD1 LINE L1 0 6633 5730 5 1006 335 294 113 30 chr15 55206050 55206218 -48288756 - L1MD1 LINE L1 -1255 5282 5101 5 1006 500 81 14 0 chr15 55206218 55206292 -48288682 + (TTA)n Simple_repeat Simple_repeat 2 76 0 5 1006 308 293 84 101 chr15 55206308 55206604 -48288370 - B4A SINE B4 0 292 2 5 1006 364 302 76 66 chr15 55206655 55207257 -48287717 - L1MD1 LINE L1 -1495 5042 4435 5 1006 995 187 50 5 chr15 55207331 55207530 -48287444 + URR1B DNA MER1_type 18 225 0 5 1006 786 265 106 0 chr15 55207732 55207921 -48287053 - ID_B1 SINE B4 -14 210 2 5 1006 583 304 111 53 chr15 55207924 55208376 -48286598 - L1MD1 LINE L1 -4485 2148 1671 5 1006 312 357 9 0 chr15 55208392 55208504 -48286470 - L1MD1 LINE L1 -5036 1597 1485 5 1006 300 322 31 47 chr15 55208572 55208699 -48286275 - ID_B1 SINE B4 -29 195 71 5 1006 233 193 123 24 chr15 55208773 55208896 -48286078 - L1MD1 LINE L1 -5160 1473 1328 5 1006 227 303 26 13 chr15 55209153 55209230 -48285744 - L1MD1 LINE L1 -5780 853 776 5 1006 799 271 69 20 chr15 55209479 55209826 -48285148 - L1MD1 LINE L1 -6221 412 49 5 1006 255 103 0 0 chr15 55210173 55210212 -48284762 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 5 1006 477 0 0 0 chr15 55212689 55212742 -48282232 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1006 203 88 29 0 chr15 55212956 55212990 -48281984 + (CATA)n Simple_repeat Simple_repeat 1 35 0 5 1006 390 295 33 0 chr15 55213783 55213884 -48281090 - PB1D7 SINE Alu 0 120 17 5 1006 243 294 0 0 chr15 55214397 55214465 -48280509 + CT-rich Low_complexity Low_complexity 4 71 0 5 1006 290 338 0 0 chr15 55214470 55214544 -48280430 - ID2 SINE ID -3 80 7 5 1006 431 141 13 0 chr15 55214602 55214680 -48280294 + (CGTG)n Simple_repeat Simple_repeat 1 79 0 5 1006 1039 161 23 0 chr15 55214680 55214854 -48280120 - B3A SINE B2 -16 182 5 5 1006 279 214 0 0 chr15 55215298 55215368 -48279606 + (TG)n Simple_repeat Simple_repeat 1 70 0 5 1006 500 178 0 19 chr15 55215370 55215473 -48279501 - B4A SINE B4 0 292 192 5 1006 1225 124 32 11 chr15 55215999 55216186 -48278788 - B2_Mm2 SINE B2 -4 191 1 5 1006 207 188 0 0 chr15 55216246 55216294 -48278680 + CT-rich Low_complexity Low_complexity 2 49 0 5 1006 1260 239 75 0 chr15 55216645 55216938 -48278036 - MTD LTR MaLR -7 412 98 5 1006 531 0 0 0 chr15 55217640 55217699 -48277275 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1006 330 26 0 0 chr15 55217699 55217737 -48277237 + (GA)n Simple_repeat Simple_repeat 2 40 0 5 1006 562 139 22 44 chr15 55218115 55218296 -48276678 + CT-rich Low_complexity Low_complexity 3 179 0 5 1006 242 309 104 77 chr15 55220904 55221086 -48273888 - MLT1G1 LTR MaLR -235 344 158 5 1006 2514 95 6 0 chr15 55221191 55221517 -48273457 - L1_Mus3 LINE L1 -6 6632 6305 5 1006 216 310 0 0 chr15 55221862 55221920 -48273054 - L4 LINE RTE -218 1811 1754 5 1006 670 261 0 6 chr15 55223399 55223561 -48271413 - ID_B1 SINE B4 -25 199 39 5 1006 5506 184 41 18 chr15 55223694 55224751 -48270223 - Lx5 LINE L1 0 7050 5970 5 1006 468 72 0 0 chr15 55225984 55226053 -48268921 + (TG)n Simple_repeat Simple_repeat 1 69 0 5 1006 265 216 203 0 chr15 55226841 55226915 -48268059 + ID_B1 SINE B4 59 147 -77 5 1006 36325 51 1 4 chr15 55227672 55233644 -48261330 + L1Md_T LINE L1 1 5589 -297 5 1006 8533 36 0 2 chr15 55233644 55234691 -48260283 + L1Md_T LINE L1 5590 6585 0 5 1006 8248 49 14 1 chr15 55235213 55236225 -48258749 + L1_Mus1 LINE L1 5572 6567 0 5 1006 2420 92 6 0 chr15 55236741 55237066 -48257908 - ORR1A2 LTR MaLR 0 327 1 5 1006 324 216 19 10 chr15 55237588 55237691 -48257283 + (CATATA)n Simple_repeat Simple_repeat 5 108 0 5 1006 203 220 40 0 chr15 55237711 55237761 -48257213 + (CATATA)n Simple_repeat Simple_repeat 6 57 0 5 1006 447 176 204 19 chr15 55238520 55238682 -48256292 + Lx8 LINE L1 7282 7473 0 5 1006 451 179 39 70 chr15 55239869 55240025 -48254949 - Lx9 LINE L1 -1 7643 7493 5 1006 1270 191 152 0 chr15 55240025 55240302 -48254672 + Lx9 LINE L1 7094 7412 -232 5 1006 228 382 66 44 chr15 55241076 55241213 -48253761 - LTR16A LTR ERVL -180 271 132 5 1006 458 229 65 41 chr15 55243570 55243693 -48251281 + PB1 SINE Alu 2 127 0 5 1006 33 103 0 0 chr15 55243860 55243977 -48250997 + AT_rich Low_complexity Low_complexity 1 117 0 5 1006 2481 118 40 13 chr15 55243998 55244393 -48250581 - Lx LINE L1 -7 6647 6242 5 1006 908 253 37 81 chr15 55245710 55245730 -48249244 - B4A SINE B4 0 292 275 5 1006 549 0 0 0 chr15 55245730 55245791 -48249183 + (GA)n Simple_repeat Simple_repeat 2 62 0 5 1006 908 253 37 81 chr15 55245791 55246067 -48248907 - B4A SINE B4 -18 274 9 5 1006 929 277 24 54 chr15 55246200 55246498 -48248476 + B4 SINE B4 2 290 -2 5 1006 183 156 0 0 chr15 55246549 55246581 -48248393 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1006 705 24 0 0 chr15 55246704 55246787 -48248187 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 5 1006 1087 83 7 20 chr15 55246787 55246935 -48248039 - B1_Mus2 SINE Alu 0 147 2 5 1006 21 0 0 0 chr15 55247822 55247843 -48247131 + AT_rich Low_complexity Low_complexity 1 21 0 5 1006 308 236 268 0 chr15 55247926 55248053 -48246921 - B3A SINE B2 0 198 38 5 1006 387 21 0 0 chr15 55248057 55248104 -48246870 - ORR1B2 LTR MaLR -8 359 313 5 1006 450 0 0 0 chr15 55248119 55248169 -48246805 + (TTTA)n Simple_repeat Simple_repeat 1 50 0 5 1006 314 138 8 34 chr15 55248184 55248250 -48246724 - B2_Mm2 SINE B2 -102 114 47 5 1006 1255 108 23 0 chr15 55248316 55248492 -48246482 - B2_Mm2 SINE B2 -14 181 2 5 1006 188 339 107 8 chr15 55250428 55250559 -48244415 + MIR SINE MIR 3 146 -116 5 1006 836 155 6 0 chr15 55250685 55250846 -48244128 + CT-rich Low_complexity Low_complexity 2 163 0 5 1006 259 307 37 68 chr15 55250936 55251097 -48243877 - L1ME1 LINE L1 -63 6116 5961 5 1006 1338 287 37 37 chr15 55251205 55251607 -48243367 + Lx5 LINE L1 6478 6879 -171 5 1006 275 304 11 11 chr15 55251804 55251897 -48243077 + Lx8 LINE L1 7381 7473 0 5 1006 504 0 0 0 chr15 55251926 55251982 -48242992 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 1006 618 79 0 0 chr15 55252550 55252639 -48242335 + (CA)n Simple_repeat Simple_repeat 1 89 0 5 1006 492 269 0 0 chr15 55252672 55252780 -48242194 - RSINE1 SINE B4 -22 143 36 5 1006 188 387 0 51 chr15 55254763 55254861 -48240113 + MIRm SINE MIR 17 109 -167 5 1006 540 0 0 0 chr15 55255468 55255528 -48239446 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 1006 239 213 0 0 chr15 55256505 55256552 -48238422 + B1_Mus2 SINE Alu 1 47 -100 6 1006 1423 75 0 5 chr15 55257095 55257308 -48237666 - L1_Mus1 LINE L1 0 6567 6380 6 1006 1604 66 0 0 chr15 55257309 55257505 -48237469 + L1_Mus1 LINE L1 6181 6376 -191 6 1006 1871 239 58 60 chr15 55257578 55258577 -48236397 - RMER13B LTR ERVK -50 908 1 6 1006 590 283 58 69 chr15 55259005 55259366 -48235608 - L1MA6 LINE L1 0 6300 5944 6 1006 4286 45 0 4 chr15 55260730 55261247 -48233727 - L1Md_F2 LINE L1 0 6582 6068 6 1006 243 0 0 0 chr15 55261264 55261291 -48233683 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 6 1006 4798 97 1 13 chr15 55261317 55261997 -48232977 - Lx2 LINE L1 -2 6995 6324 6 1006 246 135 0 0 chr15 55261998 55262035 -48232939 - Lx3_Mus LINE L1 -767 6242 6206 6 1006 23 33 0 0 chr15 55262395 55262425 -48232549 + AT_rich Low_complexity Low_complexity 1 30 0 6 1006 659 318 104 61 chr15 55262671 55263113 -48231861 - MLT1K LTR MaLR -73 522 62 6 1006 403 118 13 13 chr15 55263321 55263398 -48231576 + (TCTCCC)n Simple_repeat Simple_repeat 3 79 0 6 1006 492 254 23 53 chr15 55264581 55264714 -48230260 - RSINE1 SINE B4 -34 131 3 6 1006 668 241 14 82 chr15 55265323 55265531 -48229443 + B3A SINE B2 2 195 -3 6 1006 1103 86 82 51 chr15 55265606 55265802 -48229172 - Lx LINE L1 0 6654 6453 6 1006 455 281 70 21 chr15 55265863 55266005 -48228969 - RSINE1 SINE B4 -16 149 1 6 1006 263 303 120 64 chr15 55266231 55266464 -48228510 + MIR SINE MIR 1 246 -16 6 1006 528 332 10 58 chr15 55266920 55267125 -48227849 + ID_B1 SINE B4 1 195 -29 6 1006 1870 234 36 15 chr15 55269190 55269601 -48225373 - Lx5 LINE L1 -17 7033 6614 6 1006 279 276 0 0 chr15 55269907 55269983 -48224991 + PB1D9 SINE Alu 23 98 -22 6 1006 273 345 96 33 chr15 55270088 55270421 -48224553 - L1MB7 LINE L1 -17 6167 5814 6 1006 21 0 0 0 chr15 55270790 55270811 -48224163 + AT_rich Low_complexity Low_complexity 1 21 0 6 1006 261 377 19 19 chr15 55271040 55271197 -48223777 - L3 LINE CR1 -174 4315 4159 6 1006 680 48 0 12 chr15 55271489 55271574 -48223400 - L1Md_A LINE L1 -5851 873 790 6 1006 204 111 0 0 chr15 55271576 55271612 -48223362 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 6 1006 868 229 6 6 chr15 55272992 55273172 -48221802 + B3A SINE B2 4 183 -15 6 1006 21 0 0 0 chr15 55273225 55273246 -48221728 + AT_rich Low_complexity Low_complexity 1 21 0 6 1006 383 308 157 42 chr15 55273997 55274258 -48220716 + B4A SINE B4 2 292 0 6 1006 1058 239 92 20 chr15 55274285 55274580 -48220394 - Lx8 LINE L1 -909 6564 6249 6 1006 21 0 0 0 chr15 55275313 55275334 -48219640 + AT_rich Low_complexity Low_complexity 1 21 0 6 1006 741 236 74 35 chr15 55275436 55275638 -48219336 - ID_B1 SINE B4 -13 211 2 6 1006 251 237 34 0 chr15 55276366 55276425 -48218549 - RMER30 DNA MER1_type -7 195 135 6 1006 278 319 92 7 chr15 55276752 55276894 -48218080 + MIR SINE MIR 15 168 -94 6 1006 180 0 0 0 chr15 55277861 55277881 -48217093 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 1006 584 253 52 164 chr15 55278175 55278444 -48216530 + MTE2b LTR MaLR 1 239 -140 6 1006 33 0 0 0 chr15 55278616 55278649 -48216325 + AT_rich Low_complexity Low_complexity 1 33 0 6 1006 1237 75 0 0 chr15 55278649 55278796 -48216178 - B1_Mus1 SINE Alu 0 148 2 6 1006 266 317 12 35 chr15 55279314 55279399 -48215575 + PB1 SINE Alu 40 122 -5 6 1006 573 15 0 0 chr15 55279400 55279466 -48215508 + (CAAAG)n Simple_repeat Simple_repeat 3 68 0 6 1006 535 235 50 142 chr15 55279823 55280140 -48214834 - Lx7 LINE L1 -16 7680 7393 6 1006 1100 237 0 19 chr15 55280585 55280800 -48214174 + B3 SINE B2 1 211 -5 6 1006 456 306 45 80 chr15 55281032 55281231 -48213743 + B4A SINE B4 3 194 -98 6 1006 858 81 184 0 chr15 55281670 55281806 -48213168 + B2_Mm2 SINE B2 1 161 -34 6 1006 234 0 0 0 chr15 55281807 55281833 -48213141 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 1006 1068 253 50 90 chr15 55282353 55282469 -48212505 + MTD LTR MaLR 1 112 -307 6 1006 2554 46 10 7 chr15 55282469 55282777 -48212197 - L1Md_F2 LINE L1 -1 6581 6273 6 1006 1068 250 40 73 chr15 55282777 55283093 -48211881 + MTD LTR MaLR 113 405 -14 6 1006 524 191 48 34 chr15 55283171 55283317 -48211657 - Lx2B LINE L1 -1 6999 6852 6 1006 923 208 0 0 chr15 55284045 55284194 -48210780 - B1_Mur3 SINE Alu 0 149 1 6 1006 263 317 37 37 chr15 55284287 55284395 -48210579 - MER5A1 DNA MER1_type -57 109 2 6 1006 494 296 0 161 chr15 55284475 55284668 -48210306 + RSINE1 SINE B4 2 163 -2 6 1006 243 114 0 0 chr15 55284669 55284713 -48210261 + (GA)n Simple_repeat Simple_repeat 2 45 0 6 1006 210 133 47 62 chr15 55286947 55286970 -48208004 + polypyrimidine Low_complexity Low_complexity 44 64 0 6 1006 998 116 12 0 chr15 55286970 55287134 -48207840 + (TCCC)n Simple_repeat Simple_repeat 1 166 0 6 1006 210 133 47 62 chr15 55287134 55287174 -48207800 + polypyrimidine Low_complexity Low_complexity 2 43 0 6 1006 744 151 143 53 chr15 55287212 55287288 -48207686 - Lx4A LINE L1 -9 7049 6965 6 1006 195 42 0 0 chr15 55287288 55287312 -48207662 + (TGGG)n Simple_repeat Simple_repeat 1 24 0 6 1006 744 151 143 53 chr15 55287312 55287424 -48207550 - Lx4A LINE L1 -94 6964 6845 6 1006 329 188 12 0 chr15 55287432 55287512 -48207462 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 6 1006 218 275 42 42 chr15 55288584 55288656 -48206318 - ID4_ SINE ID -11 72 1 6 1006 753 43 0 0 chr15 55289696 55289789 -48205185 + (TTTTC)n Simple_repeat Simple_repeat 1 93 0 6 1006 1235 84 6 0 chr15 55289789 55289967 -48205007 + (TTCCC)n Simple_repeat Simple_repeat 2 180 0 6 1006 405 0 0 0 chr15 55289967 55290012 -48204962 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 6 1006 477 92 0 0 chr15 55290010 55290086 -48204888 + (TC)n Simple_repeat Simple_repeat 2 77 0 6 1006 313 271 121 43 chr15 55290347 55290578 -48204396 - Lx7 LINE L1 -1 7695 7447 6 1006 600 53 0 0 chr15 55290612 55290688 -48204286 + (CA)n Simple_repeat Simple_repeat 1 76 0 6 1006 542 187 31 53 chr15 55290729 55290854 -48204120 + L1_Mur3 LINE L1 5143 5277 -609 6 1006 842 165 30 18 chr15 55290898 55291065 -48203909 - L1Md_F2 LINE L1 0 6582 6414 6 1006 181 292 15 15 chr15 55293026 55293092 -48201882 + MIR SINE MIR 197 262 0 6 1006 278 231 89 13 chr15 55293264 55293343 -48201631 - MIRb SINE MIR -8 260 176 6 1006 284 318 76 15 chr15 55293647 55293778 -48201196 - MIR SINE MIR -122 140 2 6 1006 421 328 58 11 chr15 55295692 55295880 -48199094 - MER119 DNA MER1_type -238 345 149 6 1006 736 261 251 29 chr15 55295962 55296305 -48198669 + MTD LTR MaLR 1 419 0 6 1006 314 269 25 13 chr15 55296305 55296382 -48198592 - ID_B1 SINE B4 -63 161 84 6 1006 216 0 0 0 chr15 55298119 55298143 -48196831 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1006 207 378 0 0 chr15 55300044 55300118 -48194856 + MER91A DNA Tip100 121 194 -2 6 1006 486 142 700 0 chr15 55300353 55300473 -48194501 - B3 SINE B2 -10 206 3 6 1006 980 289 121 18 chr15 55301304 55301758 -48193216 + L1MA6 LINE L1 5657 6157 -143 6 1006 606 28 0 0 chr15 55301758 55301830 -48193144 + (CA)n Simple_repeat Simple_repeat 2 73 0 6 1006 4363 58 8 8 chr15 55302075 55302597 -48192377 + L1Md_F2 LINE L1 6049 6570 -12 6 1006 185 65 32 0 chr15 55303566 55303597 -48191377 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 1006 852 269 52 56 chr15 55303667 55303954 -48191020 - B4 SINE B4 -5 287 2 6 1006 1463 246 132 19 chr15 55305835 55306245 -48188729 - Lx8 LINE L1 -2 7471 7016 6 1006 2141 246 90 9 chr15 55307186 55307688 -48187286 - Lx8 LINE L1 -468 7005 6461 6 1006 234 0 0 0 chr15 55307688 55307714 -48187260 + (GGGA)n Simple_repeat Simple_repeat 4 29 0 6 1006 2141 246 90 9 chr15 55307714 55307776 -48187198 - Lx8 LINE L1 -1013 6460 6396 6 1006 336 235 104 38 chr15 55308042 55308148 -48186826 + B1F SINE Alu 2 114 -35 6 1006 320 147 13 0 chr15 55310249 55310324 -48184650 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 6 1006 510 17 0 0 chr15 55310422 55310481 -48184493 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 6 1007 538 209 109 17 chr15 55312959 55313134 -48181840 + ORSL-2b DNA Tip100 293 483 -25 6 1007 401 276 93 44 chr15 55313535 55313717 -48181257 - MLT1A1 LTR MaLR -217 191 1 6 1007 192 347 0 14 chr15 55313746 55313819 -48181155 + L2b LINE L2 3127 3198 -177 6 1007 1786 196 68 19 chr15 55314017 55314427 -48180547 - Lx4B LINE L1 0 7058 6629 6 1007 827 98 57 0 chr15 55314448 55314571 -48180403 + B1_Mus1 SINE Alu 10 139 -9 6 1007 295 284 132 42 chr15 55314972 55315185 -48179789 + LTR16A1 LTR ERVL 212 443 -13 6 1007 211 274 0 0 chr15 55315260 55315311 -48179663 + ID4 SINE ID 2 52 -31 6 1007 241 221 58 80 chr15 55316151 55316289 -48178685 - Lx8 LINE L1 -1 7472 7338 6 1007 844 172 11 0 chr15 55316289 55316463 -48178511 + CT-rich Low_complexity Low_complexity 1 176 0 6 1007 308 316 135 4 chr15 55316469 55316523 -48178451 - Lx8 LINE L1 -51 7422 7363 6 1007 2207 140 77 6 chr15 55316523 55316889 -48178085 - ORR1B1 LTR MaLR 0 394 3 6 1007 308 316 135 4 chr15 55316889 55317079 -48177895 - Lx8 LINE L1 -111 7362 7147 6 1007 396 221 15 150 chr15 55317080 55317213 -48177761 + B3 SINE B2 98 212 -4 6 1007 215 286 0 18 chr15 55317263 55317320 -48177654 + MIR3 SINE MIR 109 164 -44 6 1007 430 239 34 11 chr15 55317436 55317525 -48177449 - B1F SINE Alu -52 97 7 6 1007 315 149 0 0 chr15 55317603 55317677 -48177297 + (GA)n Simple_repeat Simple_repeat 1 74 0 6 1007 400 356 0 0 chr15 55317717 55317821 -48177153 - PB1D10 SINE Alu -13 104 1 6 1007 267 254 44 67 chr15 55318160 55318295 -48176679 - MLT1J1 LTR MaLR -307 137 6 7 1007 775 220 14 0 chr15 55320209 55320350 -48174624 + B1_Mur2 SINE Alu 2 144 -5 7 1007 344 233 21 72 chr15 55321164 55321261 -48173713 - MLT1D LTR MaLR -373 132 41 7 1007 603 112 0 0 chr15 55321722 55321820 -48173154 + (CA)n Simple_repeat Simple_repeat 2 99 0 7 1007 729 0 0 0 chr15 55322317 55322398 -48172576 + (GAA)n Simple_repeat Simple_repeat 3 83 0 7 1007 255 313 0 57 chr15 55323386 55323437 -48171537 + polypurine Low_complexity Low_complexity 1 50 0 7 1007 4089 153 8 34 chr15 55323437 55324108 -48170866 + Lx2B LINE L1 6348 7000 0 7 1007 255 313 0 57 chr15 55324108 55324161 -48170813 + polypurine Low_complexity Low_complexity 51 99 0 7 1007 415 224 118 27 chr15 55324880 55324990 -48169984 - PB1D7 SINE Alu 0 120 1 7 1007 198 0 0 0 chr15 55324998 55325020 -48169954 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 7 1007 341 273 120 11 chr15 55325161 55325332 -48169642 + MIR SINE MIR 10 196 -66 7 1007 211 333 17 0 chr15 55325370 55325430 -48169544 + MIR SINE MIR 158 218 -44 7 1007 1288 41 0 0 chr15 55325841 55325987 -48168987 + B1_Mus2 SINE Alu 2 147 0 7 1007 219 271 89 45 chr15 55326139 55326251 -48168723 - MIRm SINE MIR 0 276 160 7 1007 732 298 105 4 chr15 55326439 55326724 -48168250 - Lx8 LINE L1 -6 7467 7139 7 1007 784 179 204 11 chr15 55326755 55326936 -48168038 - B3 SINE B2 0 216 1 7 1007 305 330 0 10 chr15 55327817 55327915 -48167059 + (TG)n Simple_repeat Simple_repeat 1 97 0 7 1007 22 0 0 0 chr15 55330710 55330732 -48164242 + AT_rich Low_complexity Low_complexity 1 22 0 7 1007 307 275 185 11 chr15 55332091 55332183 -48162791 + ID_B1 SINE B4 5 112 -112 7 1007 528 318 135 33 chr15 55333586 55333830 -48161144 - Lx8 LINE L1 -261 7212 6944 7 1007 240 160 20 20 chr15 55333818 55333869 -48161105 + L1_Rod LINE L1 3829 3879 -1968 7 1007 23 68 0 0 chr15 55334714 55334758 -48160216 + AT_rich Low_complexity Low_complexity 1 44 0 7 1007 243 179 71 43 chr15 55335046 55335116 -48159858 - MurSatRep1 Unknown Unknown -1858 279 208 7 1007 986 282 9 79 chr15 55335124 55335329 -48159645 - MTE2a LTR MaLR -4 375 195 7 1007 477 0 0 0 chr15 55335329 55335382 -48159592 + (CA)n Simple_repeat Simple_repeat 1 53 0 7 1007 986 299 47 71 chr15 55335382 55335592 -48159382 - MTE2a LTR MaLR -178 241 1 7 1007 282 351 0 0 chr15 55336993 55337067 -48157907 - ID4 SINE ID -2 81 8 7 1007 434 18 18 0 chr15 55337085 55337140 -48157834 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 1007 414 308 100 10 chr15 55337195 55337356 -48157618 - B4 SINE B4 -32 260 90 7 1007 297 167 0 0 chr15 55337394 55337448 -48157526 + CT-rich Low_complexity Low_complexity 1 54 0 7 1007 338 217 0 46 chr15 55337451 55337538 -48157436 - BC1_Mm scRNA scRNA -56 96 14 7 1007 384 277 0 0 chr15 55337466 55337549 -48157425 - B4 SINE B4 -207 85 3 7 1007 230 305 9 120 chr15 55337550 55337561 -48157413 - PB1D7 SINE Alu -20 100 5 7 1007 403 268 134 0 chr15 55337561 55337658 -48157316 - ID_B1 SINE B4 -29 195 86 7 1007 337 300 172 28 chr15 55338680 55338965 -48156009 - MLT1F1 LTR MaLR -186 383 58 7 1007 21 0 0 0 chr15 55339247 55339268 -48155706 + AT_rich Low_complexity Low_complexity 1 21 0 7 1007 180 0 0 0 chr15 55339268 55339288 -48155686 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 7 1007 1159 45 0 0 chr15 55339288 55339444 -48155530 - B2_Mm1a SINE B2 -37 156 1 7 1007 25 31 0 0 chr15 55339570 55339602 -48155372 + AT_rich Low_complexity Low_complexity 1 32 0 7 1007 216 208 21 0 chr15 55340075 55340123 -48154851 + GA-rich Low_complexity Low_complexity 4 52 0 7 1007 457 264 57 16 chr15 55340932 55341055 -48153919 - ETnERV2-int LTR ERVK -213 7193 7066 7 1007 225 309 0 41 chr15 55342212 55342310 -48152664 + LTR33A LTR ERVL 425 518 -2 7 1007 25 0 0 0 chr15 55343470 55343495 -48151479 + AT_rich Low_complexity Low_complexity 1 25 0 7 1007 2817 111 17 60 chr15 55343504 55343973 -48151001 - RLTR11B LTR ERVK -4 449 1 7 1007 526 208 16 16 chr15 55343992 55344114 -48150860 - ID_B1 SINE B4 -1 223 102 7 1007 331 272 26 107 chr15 55345787 55346019 -48148955 + MTEb LTR MaLR 132 372 -7 7 1007 334 215 31 41 chr15 55347043 55347140 -48147834 + MT2B LTR ERVL 168 263 -338 7 1007 736 142 0 0 chr15 55347058 55347178 -48147796 + B1_Mur1 SINE Alu 28 147 -2 7 1007 334 306 200 49 chr15 55348725 55348928 -48146046 - Lx8 LINE L1 0 7473 7231 7 1007 243 0 0 0 chr15 55348928 55348955 -48146019 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 7 1007 334 306 200 49 chr15 55348955 55349016 -48145958 - Lx8 LINE L1 -243 7230 7170 7 1007 1049 187 51 0 chr15 55352593 55352807 -48142167 - URR1B DNA MER1_type 0 225 1 7 1007 234 0 0 0 chr15 55353835 55353861 -48141113 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 1007 330 91 0 0 chr15 55355491 55355546 -48139428 + (CATA)n Simple_repeat Simple_repeat 2 56 0 7 1007 429 313 83 23 chr15 55358746 55358962 -48136012 + MLT1E1 LTR MaLR 424 652 -2 7 1007 1312 78 39 11 chr15 55359132 55359313 -48135661 + B2_Mm2 SINE B2 3 188 -7 7 1007 1313 86 30 0 chr15 55359313 55359511 -48135463 + Lx2 LINE L1 6793 6996 -1 7 1007 225 0 0 0 chr15 55360391 55360416 -48134558 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 1007 180 377 23 8 chr15 55360884 55361015 -48133959 + L2 LINE L2 2730 2862 -557 7 1007 1036 136 128 22 chr15 55363122 55363348 -48131626 + MTB_Mm LTR MaLR 1 250 -157 7 1007 296 319 17 17 chr15 55366132 55366247 -48128727 + RSINE1 SINE B4 1 115 -50 7 1007 21 36 0 0 chr15 55366689 55366717 -48128257 + AT_rich Low_complexity Low_complexity 1 28 0 7 1007 258 108 108 0 chr15 55367460 55367525 -48127449 + CT-rich Low_complexity Low_complexity 2 73 0 7 1007 22 35 0 0 chr15 55370737 55370766 -48124208 + AT_rich Low_complexity Low_complexity 1 29 0 7 1007 357 281 122 16 chr15 55370911 55371034 -48123940 - B1F1 SINE Alu -2 147 12 7 1007 341 155 84 0 chr15 55372441 55372512 -48122462 + B3 SINE B2 137 213 -3 7 1007 1103 211 94 0 chr15 55373433 55373689 -48121285 - RMER1C Other Other -2 1340 1061 7 1007 327 257 0 0 chr15 55373797 55373867 -48121107 + ID4_ SINE ID 2 71 -12 7 1007 265 316 111 52 chr15 55374063 55374370 -48120604 + L1M5 LINE L1 2262 2586 -3560 7 1007 246 32 0 0 chr15 55374472 55374503 -48120471 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 1007 597 194 36 19 chr15 55374601 55374734 -48120240 + B1_Mur3 SINE Alu 1 147 -2 7 1007 477 260 15 45 chr15 55375061 55375194 -48119780 + RSINE1 SINE B4 2 130 -35 7 1007 387 0 0 0 chr15 55375210 55375253 -48119721 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 1007 390 109 0 3 chr15 55375270 55375335 -48119639 - B3 SINE B2 -135 63 1 7 1007 373 309 110 47 chr15 55375385 55375640 -48119334 + B4 SINE B4 1 271 -21 7 1007 21 0 0 0 chr15 55375680 55375701 -48119273 + AT_rich Low_complexity Low_complexity 1 21 0 7 1007 204 125 0 0 chr15 55375857 55375889 -48119085 + (A)n Simple_repeat Simple_repeat 1 32 0 7 1007 403 256 16 40 chr15 55376015 55376141 -48118833 - ID_B1 SINE B4 -11 213 91 7 1007 25 31 0 0 chr15 55376500 55376532 -48118442 + AT_rich Low_complexity Low_complexity 1 32 0 7 1007 392 288 45 8 chr15 55377421 55377554 -48117420 + ID_B1 SINE B4 81 218 -6 7 1007 524 246 16 0 chr15 55378883 55379009 -48115965 + B3 SINE B2 80 207 -9 7 1007 204 354 52 10 chr15 55379204 55379301 -48115673 + L3 LINE CR1 3773 3873 -616 7 1007 390 325 18 48 chr15 55381212 55381380 -48113594 - RSINE1 SINE B4 0 165 3 7 1007 338 243 58 10 chr15 55381614 55381718 -48113256 - L1MD LINE L1 -846 5300 5192 7 1007 294 29 0 0 chr15 55382165 55382200 -48112774 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1007 5360 117 30 24 chr15 55382560 55383401 -48111573 + Lx LINE L1 5788 6633 -21 7 1007 1688 31 0 0 chr15 55383404 55383597 -48111377 + B2_Mm1a SINE B2 1 193 0 7 1007 1114 89 0 7 chr15 55383617 55383764 -48111210 + B1_Mus1 SINE Alu 3 148 0 7 1007 216 0 0 0 chr15 55383773 55383797 -48111177 + (CCAA)n Simple_repeat Simple_repeat 4 27 0 7 1007 730 308 133 18 chr15 55384436 55384743 -48110231 - MER82 DNA MER2_type -136 517 199 7 1007 423 98 0 0 chr15 55384743 55384804 -48110170 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 1007 730 308 133 18 chr15 55384804 55384933 -48110041 - MER82 DNA MER2_type -455 198 32 7 1007 415 344 112 16 chr15 55386038 55386342 -48108632 - L2 LINE L2 -883 2536 2204 7 1007 324 299 38 30 chr15 55387379 55387510 -48107464 - B1F SINE Alu 0 149 18 7 1007 281 300 149 6 chr15 55387908 55388069 -48106905 + L2 LINE L2 2443 2626 -793 7 1007 789 203 112 20 chr15 55388274 55388470 -48106504 - ID_B1 SINE B4 -5 219 6 7 1007 814 158 0 43 chr15 55390386 55390525 -48104449 - B1_Mur4 SINE Alu -17 133 1 7 1007 457 243 88 44 chr15 55391156 55391315 -48103659 - Tigger6a DNA MER2_type -1 1082 917 7 1007 494 270 39 8 chr15 55391312 55391439 -48103535 + RSINE1 SINE B4 14 144 -21 7 1007 333 0 0 0 chr15 55391449 55391486 -48103488 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1007 880 274 87 6 chr15 55391496 55391830 -48103144 - Tigger6a DNA MER2_type -130 953 593 7 1007 668 308 50 30 chr15 55391872 55392173 -48102801 - Tigger6a DNA MER2_type -624 459 153 7 1007 192 226 0 0 chr15 55392303 55392365 -48102609 + CT-rich Low_complexity Low_complexity 2 63 0 7 1007 566 286 13 13 chr15 55392428 55392584 -48102390 - B4A SINE B4 -134 158 3 7 1007 186 43 0 0 chr15 55393062 55393085 -48101889 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 7 1007 201 143 0 0 chr15 55393845 55393880 -48101094 + (TC)n Simple_repeat Simple_repeat 2 36 0 7 1007 189 321 0 19 chr15 55396678 55396732 -48098242 - L2a LINE L2 -38 3388 3336 8 1007 721 276 7 0 chr15 55396833 55396985 -48097989 + B3 SINE B2 10 162 -54 8 1007 189 107 0 0 chr15 55399725 55399753 -48095221 + (ATTG)n Simple_repeat Simple_repeat 3 30 0 8 1007 207 324 79 26 chr15 55399964 55400040 -48094934 + MIR SINE MIR 12 91 -171 8 1007 322 325 158 12 chr15 55401021 55401186 -48093788 + MIRb SINE MIR 42 230 -38 8 1007 1000 144 67 0 chr15 55401501 55401533 -48093441 - B2_Mm1t SINE B2 -1 192 154 8 1007 219 69 0 0 chr15 55401533 55401562 -48093412 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 1007 1114 64 8 0 chr15 55401562 55401709 -48093265 - B2_Mm2 SINE B2 -40 153 1 8 1007 180 97 0 0 chr15 55401880 55401911 -48093063 + (T)n Simple_repeat Simple_repeat 1 31 0 8 1007 421 244 123 32 chr15 55401990 55402157 -48092817 - ORR1D2 LTR MaLR 0 370 202 8 1007 3268 14 0 6 chr15 55402189 55402537 -48092437 + ORR1A0 LTR MaLR 1 346 0 8 1007 257 247 105 12 chr15 55402545 55402631 -48092343 - ORR1D2 LTR MaLR -276 94 1 8 1007 325 194 0 0 chr15 55403963 55404025 -48090949 - RSINE1 SINE B4 -30 135 74 8 1007 473 103 39 0 chr15 55404350 55404428 -48090546 - L1Md_F2 LINE L1 -1 6581 6501 8 1007 2636 138 39 7 chr15 55405679 55406087 -48088887 - MTC LTR MaLR 0 421 1 8 1007 2637 36 0 10 chr15 55407142 55407450 -48087524 + L1Md_F2 LINE L1 6278 6582 0 8 1007 929 289 7 118 chr15 55408309 55408733 -48086241 - MTE2b LTR MaLR 0 379 3 8 1007 222 37 0 0 chr15 55409372 55409399 -48085575 + (T)n Simple_repeat Simple_repeat 1 27 0 8 1007 1281 27 0 27 chr15 55409401 55409551 -48085423 - B1_Mus2 SINE Alu -1 146 1 8 1007 3216 54 5 32 chr15 55409551 55409954 -48085020 - MTA_Mm LTR MaLR -4 392 1 8 1007 653 191 85 239 chr15 55410206 55410328 -48084646 + RLTR18B LTR ERVK 6 67 -549 8 1007 1339 87 37 27 chr15 55410328 55410516 -48084458 - B2_Mm2 SINE B2 -4 191 2 8 1007 2063 191 41 47 chr15 55410516 55410965 -48084009 + RLTR18B LTR ERVK 68 511 -1 8 1007 183 42 0 0 chr15 55411885 55411909 -48083065 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 8 1007 593 308 83 32 chr15 55412852 55413191 -48081783 + L1M5 LINE L1 5304 5659 -505 8 1007 437 129 20 0 chr15 55413215 55413316 -48081658 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 8 1007 460 346 118 18 chr15 55413345 55413895 -48081079 + Lx8 LINE L1 6806 7410 -63 8 1007 258 32 0 0 chr15 55414748 55414779 -48080195 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 1007 40 49 0 0 chr15 55414953 55415014 -48079960 + AT_rich Low_complexity Low_complexity 1 61 0 8 1007 271 270 40 0 chr15 55415224 55415298 -48079676 + ID4 SINE ID 5 81 -2 8 1007 22 56 0 0 chr15 55415970 55416006 -48078968 + AT_rich Low_complexity Low_complexity 1 36 0 8 1007 874 215 72 16 chr15 55416006 55416200 -48078774 + B3 SINE B2 8 212 -4 8 1007 289 301 97 0 chr15 55416459 55416552 -48078422 - MER2 DNA MER2_type -227 118 17 8 1007 476 294 17 89 chr15 55416590 55416732 -48078242 + B4A SINE B4 97 220 -72 8 1007 4961 98 18 12 chr15 55416732 55417415 -48077559 + L1_Mus3 LINE L1 5946 6632 -6 8 1007 476 285 17 78 chr15 55417415 55417490 -48077484 + B4A SINE B4 221 292 0 8 1007 294 29 0 0 chr15 55417539 55417574 -48077400 + (CA)n Simple_repeat Simple_repeat 1 35 0 8 1007 751 289 57 8 chr15 55418293 55418558 -48076416 - Lx7 LINE L1 -292 7404 7127 8 1007 21 0 0 0 chr15 55418692 55418713 -48076261 + AT_rich Low_complexity Low_complexity 1 21 0 8 1007 702 328 103 39 chr15 55419032 55419266 -48075708 - MER70A LTR ERVL -57 415 168 8 1007 3619 23 8 0 chr15 55419266 55419659 -48075315 - MTA_Mm LTR MaLR 0 396 1 8 1007 702 328 103 39 chr15 55419659 55419814 -48075160 - MER70A LTR ERVL -305 167 1 8 1007 435 260 18 78 chr15 55421164 55421331 -48073643 + RSINE1 SINE B4 9 165 0 8 1007 247 299 48 53 chr15 55421166 55421374 -48073600 + B3 SINE B2 10 216 0 8 1007 836 246 79 19 chr15 55421391 55421606 -48073368 + B4A SINE B4 5 232 -60 8 1007 233 268 27 40 chr15 55421622 55421696 -48073278 + RSINE1 SINE B4 60 132 -33 8 1007 1214 89 0 0 chr15 55423761 55423907 -48071067 + B1_Mus2 SINE Alu 2 147 0 8 1007 310 348 37 29 chr15 55424460 55424596 -48070378 - ID_B1 SINE B4 -3 221 85 8 1007 260 245 20 30 chr15 55424695 55424796 -48070178 + T-rich Low_complexity Low_complexity 2 101 0 8 1007 786 187 0 0 chr15 55425296 55425451 -48069523 + G-rich Low_complexity Low_complexity 1 155 0 8 1007 288 77 0 0 chr15 55425691 55425730 -48069244 + (T)n Simple_repeat Simple_repeat 1 39 0 8 1007 1309 41 0 0 chr15 55425730 55425876 -48069098 - B1_Mm SINE Alu 0 147 2 8 1007 901 230 53 19 chr15 55426129 55426337 -48068637 + B3 SINE B2 2 216 0 8 1007 1412 85 40 0 chr15 55426400 55426577 -48068397 - B2_Mm2 SINE B2 -9 186 3 8 1007 1294 55 0 0 chr15 55426679 55426824 -48068150 + B1_Mus2 SINE Alu 2 146 -1 8 1007 376 228 25 50 chr15 55426865 55426972 -48068002 + ID_B1 SINE B4 107 213 -11 8 1007 230 0 33 0 chr15 55426972 55427002 -48067972 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 1007 376 228 25 50 chr15 55427002 55427014 -48067960 + ID_B1 SINE B4 214 223 -1 8 1007 607 176 44 81 chr15 55427017 55427153 -48067821 + B1_Mur3 SINE Alu 1 131 -18 8 1007 252 0 0 0 chr15 55427153 55427181 -48067793 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 8 1007 651 97 9 26 chr15 55427307 55427423 -48067551 + (GGGGA)n Simple_repeat Simple_repeat 4 117 0 8 1007 277 261 15 0 chr15 55427528 55427593 -48067381 - RMER30 DNA MER1_type -14 188 123 8 1007 1144 223 226 76 chr15 55428129 55428590 -48066384 - MT2A LTR ERVL 0 533 4 8 1007 992 294 97 26 chr15 55429832 55430174 -48064800 - MTEa LTR MaLR -8 371 6 8 1007 374 149 13 26 chr15 55430203 55430279 -48064695 - RMER13A LTR ERVK -639 221 147 8 1007 395 246 17 34 chr15 55430274 55430392 -48064582 - RLTR26 LTR ERVK -372 270 155 8 1007 265 252 7 0 chr15 55430425 55430506 -48064468 + MIR SINE MIR 159 244 -24 8 1007 1041 281 29 86 chr15 55430780 55430846 -48064128 - ORR1D1 LTR MaLR -4 370 306 8 1007 1270 54 0 0 chr15 55430846 55430994 -48063980 + B1_Mus1 SINE Alu 1 148 0 8 1007 1041 281 29 86 chr15 55430994 55431312 -48063662 - ORR1D1 LTR MaLR -69 305 8 8 1007 203 327 82 82 chr15 55432003 55432186 -48062788 + L2a LINE L2 3244 3426 0 8 1007 3106 58 11 5 chr15 55433502 55433884 -48061090 - L1Md_F2 LINE L1 -1 6581 6198 8 1007 396 0 0 0 chr15 55434502 55434546 -48060428 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1007 25 0 0 0 chr15 55434908 55434933 -48060041 + AT_rich Low_complexity Low_complexity 1 25 0 8 1007 1238 226 112 38 chr15 55435125 55435473 -48059501 - MTD LTR MaLR -14 405 44 8 1007 622 271 25 49 chr15 55437127 55437290 -48057684 + RSINE1 SINE B4 2 160 -5 8 1007 351 0 0 0 chr15 55437312 55437351 -48057623 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 8 1007 216 0 0 0 chr15 55437481 55437505 -48057469 + (TTCA)n Simple_repeat Simple_repeat 2 25 0 8 1007 349 283 9 78 chr15 55438670 55438785 -48056189 - RSINE1 SINE B4 0 165 59 8 1007 252 0 0 0 chr15 55438964 55438992 -48055982 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 8 1007 1173 57 7 0 chr15 55438994 55439135 -48055839 - B1_Mus1 SINE Alu -6 142 1 8 1007 23 33 0 0 chr15 55439286 55439316 -48055658 + AT_rich Low_complexity Low_complexity 1 30 0 8 1007 415 238 14 106 chr15 55439685 55439826 -48055148 + RLTR24 LTR ERV1 7 134 -395 8 1007 229 347 37 93 chr15 55439883 55439991 -48054983 + RLTR24 LTR ERV1 319 420 -109 8 1007 521 268 80 0 chr15 55440225 55440363 -48054611 - B1F SINE Alu 0 149 1 8 1007 1282 167 18 18 chr15 55440432 55440657 -48054317 + URR1B DNA MER1_type 1 225 0 8 1007 366 267 0 22 chr15 55441862 55441996 -48052978 - B1F1 SINE Alu -16 133 3 8 1007 217 341 70 49 chr15 55441877 55442018 -48052956 - B4A SINE B4 -86 206 62 8 1007 1562 182 141 14 chr15 55442018 55442380 -48052594 - MTD LTR MaLR 0 419 12 8 125 1206 280 87 60 chr15 55443110 55443639 -48051335 - Lx8 LINE L1 -208 7265 6723 8 1008 227 320 94 57 chr15 55443735 55444053 -48050921 - Lx8 LINE L1 -1188 6285 5956 8 1008 274 299 4 12 chr15 55444053 55444310 -48050664 + C-rich Low_complexity Low_complexity 1 254 0 8 1008 227 103 0 25 chr15 55444593 55444633 -48050341 + (TATG)n Simple_repeat Simple_repeat 4 42 0 8 1008 600 295 49 41 chr15 55444654 55444898 -48050076 - B4A SINE B4 -41 251 6 8 1008 184 130 43 0 chr15 55444917 55444963 -48050011 + T-rich Low_complexity Low_complexity 4 51 0 8 1008 216 0 0 0 chr15 55444963 55444987 -48049987 + (TTCC)n Simple_repeat Simple_repeat 3 26 0 8 1008 840 127 11 28 chr15 55444987 55445150 -48049824 + CT-rich Low_complexity Low_complexity 17 177 0 8 1008 1147 72 0 27 chr15 55445150 55445335 -48049639 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 8 1008 840 127 11 28 chr15 55445335 55445349 -48049625 + polypyrimidine Low_complexity Low_complexity 3 16 0 8 1008 809 0 97 0 chr15 55445349 55445546 -48049428 + (TTTCC)n Simple_repeat Simple_repeat 1 216 0 8 1008 432 0 0 0 chr15 55445548 55445596 -48049378 + (TTTC)n Simple_repeat Simple_repeat 1 48 0 8 1008 540 205 82 0 chr15 55445597 55445719 -48049255 - B1_Mur1 SINE Alu -13 136 5 8 1008 22 0 0 0 chr15 55445729 55445751 -48049223 + AT_rich Low_complexity Low_complexity 1 22 0 8 1008 2048 170 81 18 chr15 55446369 55446765 -48048209 - MTC LTR MaLR 0 421 1 8 1008 271 350 50 8 chr15 55446769 55446890 -48048084 - Kanga1 DNA Tc2 -1325 420 295 8 1008 505 262 112 33 chr15 55447410 55447651 -48047323 - L1MA9 LINE L1 -42 6270 6011 8 1008 256 328 0 0 chr15 55448112 55448179 -48046795 - MIRc SINE MIR -149 119 53 8 1008 1198 61 0 0 chr15 55450217 55450364 -48044610 - B1_Mus2 SINE Alu 0 147 1 8 1008 774 281 60 39 chr15 55450659 55450998 -48043976 - MTE2a LTR MaLR -14 405 20 8 1008 617 297 24 9 chr15 55452776 55452987 -48041987 - B4A SINE B4 -78 214 1 9 1008 2268 223 108 71 chr15 55453955 55454795 -48040179 - L1_Rod LINE L1 -1480 4367 3497 9 1008 198 128 0 0 chr15 55454874 55454913 -48040061 + (T)n Simple_repeat Simple_repeat 1 39 0 9 1008 1223 48 0 0 chr15 55454913 55455060 -48039914 - B1_Mm SINE Alu 0 147 1 9 1008 305 174 0 0 chr15 55455064 55455110 -48039864 + Lx9 LINE L1 7209 7254 -390 9 1008 414 254 0 16 chr15 55455129 55455257 -48039717 + Lx9 LINE L1 7518 7643 -1 9 1008 236 297 86 71 chr15 55455499 55455709 -48039265 + HAL1 LINE L1 1527 1739 -768 9 1008 276 297 0 0 chr15 55456426 55456490 -48038484 - ID4_ SINE ID -17 66 3 9 1008 429 115 0 0 chr15 55456687 55456765 -48038209 + (TG)n Simple_repeat Simple_repeat 2 79 0 9 1008 23 54 0 0 chr15 55457891 55457928 -48037046 + AT_rich Low_complexity Low_complexity 1 37 0 9 1008 411 219 226 52 chr15 55458026 55458238 -48036736 + ORR1D2 LTR MaLR 1 249 -121 9 1008 3236 177 11 0 chr15 55459411 55459953 -48035021 - Lx5 LINE L1 -262 6788 6241 9 1008 273 302 99 28 chr15 55460173 55460425 -48034549 + L1M5 LINE L1 4931 5200 -946 9 1008 280 223 94 57 chr15 55460438 55460595 -48034379 + L1M5 LINE L1 5265 5430 -749 9 1008 1398 172 98 58 chr15 55461091 55461468 -48033506 - RMER20B LTR ERVK -214 413 22 9 1008 1036 240 108 6 chr15 55462899 55463213 -48031761 - ORR1D2 LTR MaLR -4 366 21 9 1008 333 0 0 0 chr15 55463213 55463250 -48031724 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 1008 233 333 71 36 chr15 55464176 55464316 -48030658 + MLT1H2 LTR MaLR 321 465 -24 9 1008 291 93 0 0 chr15 55464951 55464994 -48029980 + (TAA)n Simple_repeat Simple_repeat 1 43 0 9 1008 234 279 117 45 chr15 55466132 55466286 -48028688 + RMER15 LTR ERVL 406 570 -5 9 1008 279 359 2 0 chr15 55466295 55466384 -48028590 - LTR16D1 LTR ERVL -397 278 165 9 1008 236 317 61 39 chr15 55466980 55467210 -48027764 + L3 LINE CR1 4186 4420 -69 9 1008 35 0 0 0 chr15 55468706 55468741 -48026233 + AT_rich Low_complexity Low_complexity 1 35 0 9 1008 551 51 13 0 chr15 55469993 55470072 -48024902 + (TG)n Simple_repeat Simple_repeat 2 81 0 9 1008 533 247 94 39 chr15 55471806 55471987 -48022987 - MTE2b LTR MaLR -2 377 187 9 1008 243 372 36 7 chr15 55472060 55472198 -48022776 - MIRb SINE MIR -91 177 36 9 1008 181 403 0 0 chr15 55472253 55472325 -48022649 - MIR3 SINE MIR -32 176 105 9 1008 1150 112 55 10 chr15 55472407 55472606 -48022368 + L1_Mus3 LINE L1 6431 6638 0 9 1008 1088 54 0 87 chr15 55473443 55473604 -48021370 + B1_Mus2 SINE Alu 1 147 0 9 1008 474 65 0 0 chr15 55474748 55474810 -48020164 + (CCA)n Simple_repeat Simple_repeat 1 62 0 9 1008 3421 30 5 0 chr15 55476212 55476606 -48018368 - MTA_Mm LTR MaLR 0 396 1 9 1008 711 62 0 0 chr15 55476914 55477011 -48017963 + (TCC)n Simple_repeat Simple_repeat 2 98 0 9 1008 22 56 0 0 chr15 55477438 55477474 -48017500 + AT_rich Low_complexity Low_complexity 1 36 0 9 1008 416 139 0 34 chr15 55478540 55478629 -48016345 + (CA)n Simple_repeat Simple_repeat 2 87 0 9 1008 240 35 0 0 chr15 55479922 55479951 -48015023 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 9 1008 314 333 111 75 chr15 55480113 55480392 -48014582 - MamRep137 DNA TcMar? -147 297 9 9 1008 383 246 78 17 chr15 55481355 55481471 -48013503 - B4 SINE B4 -87 205 83 9 1008 797 144 7 0 chr15 55482046 55482192 -48012782 + GA-rich Low_complexity Low_complexity 2 148 0 9 1008 270 270 149 28 chr15 55483792 55483933 -48011041 + MLT1B LTR MaLR 210 367 -23 9 1008 536 124 0 17 chr15 55484766 55484881 -48010093 + (TCTCTG)n Simple_repeat Simple_repeat 6 118 0 9 1008 530 314 47 67 chr15 55484900 55485197 -48009777 - B4A SINE B4 0 292 2 9 1008 185 245 136 97 chr15 55486234 55486388 -48008586 + MIRb SINE MIR 67 226 -42 9 1008 2279 146 39 12 chr15 55486405 55486814 -48008160 + MTC LTR MaLR 1 420 -1 9 1008 393 266 26 0 chr15 55486825 55486938 -48008036 + L2a LINE L2 3301 3416 -10 9 1008 486 320 18 40 chr15 55487406 55487634 -48007340 + B4 SINE B4 1 223 -69 9 1008 234 0 0 0 chr15 55487734 55487760 -48007214 + (CA)n Simple_repeat Simple_repeat 1 26 0 9 1008 333 0 0 0 chr15 55487760 55487796 -48007178 + (GA)n Simple_repeat Simple_repeat 2 38 0 9 1008 270 246 42 50 chr15 55488285 55488405 -48006569 + GA-rich Low_complexity Low_complexity 3 121 0 9 1008 820 160 7 0 chr15 55489911 55490055 -48004919 - B1_Mus2 SINE Alu 0 147 3 9 1008 486 0 0 0 chr15 55491311 55491365 -48003609 + (TA)n Simple_repeat Simple_repeat 2 55 0 9 1008 374 327 88 57 chr15 55491654 55491985 -48002989 + MLT1B LTR MaLR 12 352 -38 9 1008 234 293 13 0 chr15 55492604 55492679 -48002295 + CT-rich Low_complexity Low_complexity 6 81 0 9 1008 224 312 62 12 chr15 55492888 55493050 -48001924 - MIR SINE MIR -18 244 75 9 1008 403 297 9 18 chr15 55493285 55493398 -48001576 + MTEa LTR MaLR 213 324 -55 9 1008 301 330 18 0 chr15 55494728 55494840 -48000134 - Tigger5 DNA MER2_type -2 2404 2291 9 1008 240 361 12 0 chr15 55494867 55494950 -48000024 - Tigger5 DNA MER2_type -2322 84 1 9 1008 4134 130 33 17 chr15 55495049 55495802 -47999172 + RMER12 LTR ERVK 1 765 -557 9 1008 198 118 0 0 chr15 55495805 55495839 -47999135 + (TG)n Simple_repeat Simple_repeat 1 34 0 9 1008 362 257 38 83 chr15 55495852 55496009 -47998965 + RMER12 LTR ERVK 995 1144 -178 9 1008 249 279 199 31 chr15 55496046 55496242 -47998732 + RLTR21 LTR ERVK 1344 1572 0 9 1008 248 278 42 0 chr15 55496242 55496314 -47998660 + Charlie5 DNA MER1_type 24 98 -2526 9 1008 450 0 0 0 chr15 55497474 55497524 -47997450 + (TC)n Simple_repeat Simple_repeat 1 50 0 9 1008 817 262 12 1 chr15 55498788 55499024 -47995950 - L1M3 LINE L1 -534 5757 5519 9 1008 251 231 81 93 chr15 55499071 55499157 -47995817 + RMER1B Other Other 2 86 -980 9 1008 4503 144 28 16 chr15 55499166 55499997 -47994977 - MTC-int LTR MaLR -388 870 30 9 1008 2832 82 48 15 chr15 55500024 55500418 -47994556 - MTB_Mm LTR MaLR 0 407 1 1 1008 959 255 42 27 chr15 55500418 55500753 -47994221 - L1M3 LINE L1 -1097 5043 4704 2 1008 318 138 0 0 chr15 55500791 55500849 -47994125 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 1008 614 273 6 17 chr15 55500890 55501105 -47993869 + L1MB1 LINE L1 5871 6083 -85 4 1008 261 0 0 0 chr15 55501167 55501196 -47993778 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1008 39052 38 0 2 chr15 55501630 55507725 -47987249 - L1Md_T LINE L1 0 6585 409 6 1008 259 221 196 21 chr15 55508745 55508842 -47986132 + MER5A1 DNA MER1_type 53 166 0 7 1008 314 91 0 18 chr15 55508982 55509038 -47985936 + (TATG)n Simple_repeat Simple_repeat 2 56 0 8 1008 430 280 0 0 chr15 55509057 55509150 -47985824 - RSINE1 SINE B4 -29 136 44 9 1008 38651 30 1 1 chr15 55509155 55516424 -47978550 - L1Md_T LINE L1 0 6585 1 1 1008 24 0 0 0 chr15 55516574 55516598 -47978376 + AT_rich Low_complexity Low_complexity 1 24 0 1 1008 247 275 0 14 chr15 55516660 55516734 -47978240 - PB1D10 SINE Alu -80 69 1 1 1008 213 351 0 13 chr15 55516675 55516750 -47978224 - ID_B1 SINE B4 -84 140 67 1 1008 255 67 31 62 chr15 55518389 55518453 -47976521 + T-rich Low_complexity Low_complexity 3 64 0 1 1008 1005 139 139 0 chr15 55518508 55518695 -47976279 - Lx3B LINE L1 -1 6972 6760 1 1008 1198 182 38 146 chr15 55518758 55519183 -47975791 + RMER13B LTR ERVK 5 383 -525 1 1008 435 359 70 14 chr15 55519503 55519718 -47975256 + B4A SINE B4 20 246 -46 1 1008 430 114 25 0 chr15 55519889 55519968 -47975006 + (TCTCCC)n Simple_repeat Simple_repeat 5 85 0 1 1008 351 0 0 0 chr15 55519982 55520021 -47974953 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1008 447 273 0 26 chr15 55520024 55520137 -47974837 - RSINE1 SINE B4 -54 111 2 2 1008 22 35 0 0 chr15 55520145 55520174 -47974800 + AT_rich Low_complexity Low_complexity 1 29 0 2 1008 731 284 75 32 chr15 55521436 55521716 -47973258 + B4A SINE B4 1 292 0 2 1008 420 183 0 0 chr15 55521733 55521826 -47973148 + (CA)n Simple_repeat Simple_repeat 2 94 0 2 1008 306 305 174 7 chr15 55521906 55522061 -47972913 + L1ME1 LINE L1 5491 5671 -493 2 1008 979 295 85 16 chr15 55522064 55522424 -47972550 + MTEa LTR MaLR 1 359 0 2 1008 324 289 45 30 chr15 55522490 55522690 -47972284 + L1ME1 LINE L1 5744 5946 -233 2 1008 368 322 102 28 chr15 55524034 55524210 -47970764 - RMER30 DNA MER1_type -5 197 9 2 1008 1031 102 0 52 chr15 55525063 55525218 -47969756 - B1_Mus2 SINE Alu 0 147 1 2 1008 318 26 0 0 chr15 55525254 55525293 -47969681 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1008 1170 295 14 17 chr15 55525460 55525815 -47969159 - MTEa LTR MaLR -21 358 5 2 1008 624 331 79 7 chr15 55525824 55526116 -47968858 + MLT1C LTR MaLR 143 455 -12 3 1008 184 250 0 0 chr15 55526146 55526194 -47968780 - MIRb SINE MIR -90 178 131 3 1008 267 253 13 0 chr15 55527146 55527218 -47967756 - B1F SINE Alu -46 81 6 3 1008 350 293 178 50 chr15 55527388 55527647 -47967327 - MLT1D LTR MaLR -174 331 40 3 1008 430 335 67 11 chr15 55528029 55528207 -47966767 + MLT2B2 LTR ERVL 13 200 -315 3 1008 942 176 0 0 chr15 55528331 55528569 -47966405 + (TG)n Simple_repeat Simple_repeat 1 238 0 3 1008 231 146 0 0 chr15 55529064 55529105 -47965869 + (CAA)n Simple_repeat Simple_repeat 2 42 0 3 1008 189 0 0 0 chr15 55529681 55529702 -47965272 + (TCTG)n Simple_repeat Simple_repeat 2 22 0 3 1008 492 322 28 0 chr15 55529704 55529847 -47965127 - RSINE1 SINE B4 -17 148 2 3 1008 217 270 15 31 chr15 55529913 55529978 -47964996 + MIRm SINE MIR 89 152 -124 3 1008 1017 225 87 12 chr15 55530436 55530688 -47964286 - Lx5 LINE L1 0 7050 6780 4 1008 401 102 68 0 chr15 55531002 55531061 -47963913 + Lx2B LINE L1 6536 6598 -402 4 1008 763 139 94 58 chr15 55531061 55531252 -47963722 + RMER13B LTR ERVK 1 198 -710 4 1008 1421 177 7 26 chr15 55531249 55531522 -47963452 - RMER13B LTR ERVK -509 399 132 4 1008 225 0 0 0 chr15 55531522 55531547 -47963427 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1008 204 321 26 62 chr15 55533429 55533542 -47961432 - L2c LINE L2 -13 3374 3266 4 1008 216 0 0 0 chr15 55534015 55534039 -47960935 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1008 5955 48 7 0 chr15 55534215 55535022 -47959952 - L1_Mus1 LINE L1 0 6567 5843 4 1008 23 0 0 0 chr15 55536616 55536639 -47958335 + AT_rich Low_complexity Low_complexity 1 23 0 4 1008 3827 212 82 36 chr15 55536879 55538157 -47956817 - RMER1A Other Other -13 1017 7 4 1008 208 262 0 0 chr15 55538295 55538337 -47956637 + (TATG)n Simple_repeat Simple_repeat 3 44 0 5 1008 731 240 50 45 chr15 55538339 55538540 -47956434 - B3 SINE B2 -13 203 2 5 1008 21 0 0 0 chr15 55539657 55539678 -47955296 + AT_rich Low_complexity Low_complexity 1 21 0 5 1008 241 260 0 0 chr15 55540032 55540105 -47954869 + L1ME3A LINE L1 6040 6112 -61 5 1008 627 346 17 50 chr15 55541574 55541976 -47952998 + MT2A LTR ERVL 1 389 -144 5 1008 331 147 30 44 chr15 55542508 55542643 -47952331 + (TCTG)n Simple_repeat Simple_repeat 2 134 0 5 1008 234 196 0 0 chr15 55542792 55542838 -47952136 + MT2A LTR ERVL 486 531 -2 5 1008 195 69 0 0 chr15 55543197 55543226 -47951748 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 1008 2378 142 97 15 chr15 55543301 55543774 -47951200 + RLTR28 LTR ERVL 1 512 -12 5 1008 254 239 0 53 chr15 55544115 55544190 -47950784 + GA-rich Low_complexity Low_complexity 4 74 0 5 1008 23 0 0 0 chr15 55544209 55544232 -47950742 + AT_rich Low_complexity Low_complexity 1 23 0 5 1008 889 290 68 13 chr15 55544232 55544616 -47950358 + RMER5 LTR ERV1 128 532 -2 6 1008 358 236 0 101 chr15 55544830 55544929 -47950045 + MLT2C1 LTR ERVL 460 548 -15 6 1008 235 257 145 108 chr15 55545241 55545407 -47949567 + MER5A DNA MER1_type 8 179 -10 6 1008 533 261 7 9 chr15 55546081 55546221 -47948753 + ID_B1 SINE B4 81 218 -74 6 1008 354 183 0 0 chr15 55546232 55546303 -47948671 + (CTA)n Simple_repeat Simple_repeat 1 71 0 6 1008 13075 107 5 5 chr15 55546696 55549447 -47945527 - L1_Mus3 LINE L1 -1 6637 3888 6 1008 3652 196 85 75 chr15 55549792 55550235 -47944739 + RMER19B LTR ERVK 4 425 -477 6 1008 423 0 0 0 chr15 55550235 55550282 -47944692 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1008 417 20 0 0 chr15 55550282 55550331 -47944643 + (GA)n Simple_repeat Simple_repeat 2 51 0 6 1008 3652 196 85 75 chr15 55550331 55550776 -47944198 + RMER19B LTR ERVK 426 901 -1 6 1008 447 193 138 40 chr15 55550788 55550941 -47944033 + B3 SINE B2 48 216 0 6 1008 523 315 153 29 chr15 55552512 55552891 -47942083 + L1MEd LINE L1 338 763 -5356 7 1008 679 291 108 44 chr15 55552894 55553254 -47941720 + MLT1B LTR MaLR 8 390 0 7 1008 597 261 0 63 chr15 55553323 55553466 -47941508 + B1F2 SINE Alu 4 137 -12 7 1008 288 0 0 0 chr15 55553466 55553498 -47941476 + (CAAA)n Simple_repeat Simple_repeat 3 34 0 7 1008 235 189 0 0 chr15 55553535 55553572 -47941402 + Lx9 LINE L1 5856 5892 -1752 7 1008 21 0 0 0 chr15 55554207 55554228 -47940746 + AT_rich Low_complexity Low_complexity 1 21 0 7 1008 392 279 58 22 chr15 55554691 55554830 -47940144 - ID_B1 SINE B4 0 224 81 7 1008 4595 203 74 22 chr15 55554848 55555886 -47939088 + Lx7 LINE L1 6605 7696 0 7 1008 240 167 91 18 chr15 55556861 55556916 -47938058 - LTR39 LTR ERV1 -683 100 42 7 1008 239 283 114 30 chr15 55557233 55557364 -47937610 - MIRb SINE MIR -60 208 67 7 1008 216 314 0 0 chr15 55558308 55558359 -47936615 + polypyrimidine Low_complexity Low_complexity 4 54 0 8 1008 246 191 0 78 chr15 55558409 55558460 -47936514 - ID SINE ID -165 59 13 7 1008 513 0 0 0 chr15 55559602 55559659 -47935315 + (TC)n Simple_repeat Simple_repeat 1 57 0 8 1008 189 0 0 0 chr15 55559710 55559731 -47935243 + (T)n Simple_repeat Simple_repeat 1 21 0 8 1008 1243 68 0 0 chr15 55559731 55559878 -47935096 - B1_Mm SINE Alu 0 147 1 8 1008 831 181 0 0 chr15 55559923 55560139 -47934835 + CT-rich Low_complexity Low_complexity 1 216 0 8 1008 1320 254 86 26 chr15 55562156 55562612 -47932362 + RMER5 LTR ERV1 33 515 -19 8 1008 396 208 0 0 chr15 55562646 55562718 -47932256 - RMER1C Other Other -1 1341 1270 8 1008 689 289 41 41 chr15 55564185 55564405 -47930569 + ID_B1 SINE B4 2 221 -3 8 1008 376 323 143 22 chr15 55565167 55565439 -47929535 + LTR16A1 LTR ERVL 94 398 -58 8 1008 711 279 62 44 chr15 55565706 55565980 -47928994 + LTR53 LTR ERVL 239 517 -2 8 1008 405 0 0 0 chr15 55567024 55567069 -47927905 + (CA)n Simple_repeat Simple_repeat 2 46 0 9 1008 573 15 0 0 chr15 55567069 55567134 -47927840 + (GA)n Simple_repeat Simple_repeat 2 67 0 9 1008 181 214 0 54 chr15 55567193 55567237 -47927737 + GA-rich Low_complexity Low_complexity 1 44 0 9 1008 360 0 0 0 chr15 55567237 55567277 -47927697 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 1008 181 214 0 54 chr15 55567277 55567306 -47927668 + polypurine Low_complexity Low_complexity 45 70 0 9 1008 705 299 53 91 chr15 55567333 55567764 -47927210 - Tigger6a DNA MER2_type -6 1077 663 9 1008 24 32 0 0 chr15 55567764 55567795 -47927179 + AT_rich Low_complexity Low_complexity 1 31 0 9 1008 218 313 132 0 chr15 55567795 55567878 -47927096 - PB1D10 SINE Alu -5 112 19 9 1008 1002 332 86 11 chr15 55567879 55568415 -47926559 - Tigger6a DNA MER2_type -408 675 100 9 1008 24 53 0 0 chr15 55569343 55569381 -47925593 + AT_rich Low_complexity Low_complexity 1 38 0 9 1008 23743 127 45 9 chr15 55569708 55571139 -47923835 + L1_Mus1 LINE L1 1852 3301 -2582 9 1008 211 0 0 81 chr15 55571139 55571176 -47923798 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1008 23743 127 45 9 chr15 55571176 55572493 -47922481 + L1_Mus1 LINE L1 3302 4731 -1152 9 1008 237 33 0 0 chr15 55572493 55572523 -47922451 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 1 1008 23743 86 21 4 chr15 55572523 55574349 -47920625 + L1_Mus1 LINE L1 4732 6567 0 9 1008 246 32 0 0 chr15 55574352 55574383 -47920591 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 15 7593 97 10 5 chr15 55574388 55575560 -47919414 + L1_Mus3 LINE L1 5453 6631 -7 1 1009 248 356 20 10 chr15 55575644 55575746 -47919228 + MIR3 SINE MIR 84 186 -22 1 1009 570 310 94 24 chr15 55575824 55576078 -47918896 + B4A SINE B4 3 274 -18 1 1009 220 309 15 0 chr15 55577186 55577254 -47917720 + (CATA)n Simple_repeat Simple_repeat 4 72 0 1 1009 383 287 76 56 chr15 55577567 55577711 -47917263 + LTR33 LTR ERVL 214 360 -155 1 1009 443 264 11 0 chr15 55578007 55578098 -47916876 + ID_B1 SINE B4 6 97 -127 1 1009 249 295 167 0 chr15 55578211 55578289 -47916685 + PB1D10 SINE Alu 10 100 -17 1 1009 531 123 22 30 chr15 55579642 55579776 -47915198 + (CAT)n Simple_repeat Simple_repeat 3 135 0 1 1009 216 0 0 0 chr15 55580083 55580107 -47914867 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 1009 576 248 13 60 chr15 55581381 55581531 -47913443 - ID_B1 SINE B4 0 224 82 1 1009 463 238 65 45 chr15 55581720 55581874 -47913100 + ORR1C2 LTR MaLR 1 157 -227 1 1009 3004 216 16 11 chr15 55581872 55582500 -47912474 + ORR1C2-int LTR MaLR 11 641 -868 1 1009 226 191 0 0 chr15 55582485 55582548 -47912426 + ORR1C2-int LTR MaLR 763 825 -684 1 1009 7315 101 5 13 chr15 55582548 55583594 -47911380 + Lx3_Mus LINE L1 5952 6988 -21 1 1009 222 91 0 0 chr15 55583594 55583627 -47911347 + (TAAG)n Simple_repeat Simple_repeat 2 34 0 1 1009 765 22 0 0 chr15 55583627 55583717 -47911257 + (CA)n Simple_repeat Simple_repeat 2 92 0 1 1009 3404 216 3 13 chr15 55583722 55584417 -47910557 + ORR1C2-int LTR MaLR 820 1507 -2 1 1009 1939 186 74 30 chr15 55584419 55584785 -47910189 + ORR1C2 LTR MaLR 1 382 -2 1 1009 288 285 97 0 chr15 55584799 55584943 -47910031 - L1MC4a LINE L1 -2 7880 7723 1 1009 319 296 88 39 chr15 55585205 55585409 -47909565 - MIR SINE MIR 0 262 49 1 1009 540 106 0 0 chr15 55586058 55586152 -47908822 + (TCTCTG)n Simple_repeat Simple_repeat 2 95 0 1 1009 486 0 0 0 chr15 55586152 55586206 -47908768 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1009 311 269 118 0 chr15 55586411 55586504 -47908470 - PB1D10 SINE Alu -12 105 2 1 1009 249 265 70 42 chr15 55586731 55586802 -47908172 - ID4_ SINE ID -9 74 2 1 1009 274 333 0 0 chr15 55586822 55586906 -47908068 - B1_Mur1 SINE Alu 0 149 66 1 1009 302 312 64 11 chr15 55586910 55587004 -47907970 - B1F2 SINE Alu -42 107 9 1 1009 735 132 17 0 chr15 55587068 55587242 -47907732 + (GA)n Simple_repeat Simple_repeat 2 178 0 1 1009 563 196 6 0 chr15 55587265 55587423 -47907551 + GA-rich Low_complexity Low_complexity 2 160 0 1 1009 386 288 60 67 chr15 55587475 55587609 -47907365 + MER5A DNA MER1_type 1 133 -56 1 1009 3087 186 49 29 chr15 55588061 55588657 -47906317 + Lx6 LINE L1 6090 6697 -763 1 1009 183 80 0 0 chr15 55588659 55588684 -47906290 + (TTATG)n Simple_repeat Simple_repeat 2 26 0 1 1009 550 199 159 8 chr15 55588697 55588829 -47906145 + Lx6 LINE L1 7295 7446 -14 1 1009 315 49 0 0 chr15 55588830 55588871 -47906103 + (GA)n Simple_repeat Simple_repeat 1 41 0 1 1009 455 246 15 58 chr15 55588921 55589063 -47905911 - MLT1F2 LTR MaLR -5 675 435 1 1009 415 300 30 66 chr15 55589368 55589565 -47905409 + MLT1C LTR MaLR 262 443 -24 1 1009 309 51 0 0 chr15 55590839 55590878 -47904096 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1009 571 233 8 0 chr15 55591041 55591161 -47903813 - B3 SINE B2 -86 130 10 1 1009 360 0 0 0 chr15 55591228 55591268 -47903706 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1009 1278 271 45 14 chr15 55591506 55591858 -47903116 - MTE2b LTR MaLR -12 367 5 1 1009 248 271 207 46 chr15 55592335 55592509 -47902465 + MLT1N2 LTR MaLR 151 352 -210 1 1009 260 263 115 10 chr15 55593263 55593359 -47901615 + MER53 DNA hAT 1 106 -87 1 1009 246 326 51 121 chr15 55596438 55596595 -47898379 - L2b LINE L2 -2 3385 3240 1 1009 184 341 86 21 chr15 55596641 55596734 -47898240 + MIRm SINE MIR 88 186 -90 1 1009 237 277 20 10 chr15 55597170 55597272 -47897702 - L1MEc LINE L1 -4909 1491 1389 1 1009 385 283 17 26 chr15 55597422 55597538 -47897436 - PB1D10 SINE Alu -2 115 1 1 1009 992 300 157 25 chr15 55597622 55598552 -47896422 - L1MEc LINE L1 -5329 1071 19 1 1009 243 0 0 0 chr15 55599379 55599406 -47895568 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1009 261 240 258 23 chr15 55599473 55599605 -47895369 - MER5A1 DNA MER1_type -3 163 1 1 1009 253 214 36 0 chr15 55600226 55600282 -47894692 - MER5A DNA MER1_type -23 166 109 1 1009 204 305 17 0 chr15 55600577 55600636 -47894338 + MIRb SINE MIR 33 92 -176 1 1009 3274 120 21 19 chr15 55600877 55601362 -47893612 - Lx LINE L1 -1 6653 6168 1 1009 197 338 14 14 chr15 55601724 55601796 -47893178 - MER5A DNA MER1_type -60 129 58 1 1009 276 274 142 0 chr15 55601870 55601976 -47892998 + MLT1C LTR MaLR 7 127 -340 1 1009 501 257 59 18 chr15 55601998 55602168 -47892806 + MLT1C LTR MaLR 291 467 0 1 1009 468 0 0 0 chr15 55602209 55602261 -47892713 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1009 578 338 42 46 chr15 55602384 55602691 -47892283 + ORR1E LTR MaLR 48 353 -6 1 1009 1932 196 99 13 chr15 55603043 55603425 -47891549 + MTC LTR MaLR 5 419 -2 1 1009 1600 172 118 6 chr15 55603725 55604047 -47890927 - ORR1B2 LTR MaLR -8 359 2 1 1009 1528 70 0 24 chr15 55604421 55604626 -47890348 - L1_Mus1 LINE L1 0 6567 6368 1 1009 495 339 147 24 chr15 55605250 55605631 -47889343 - Lx8 LINE L1 -8 7465 7038 1 1009 196 312 0 15 chr15 55605703 55605768 -47889206 - MIRc SINE MIR -28 240 177 1 1009 657 22 33 0 chr15 55606004 55606095 -47888879 + (CA)n Simple_repeat Simple_repeat 2 95 0 1 1009 22 0 0 0 chr15 55606134 55606156 -47888818 + AT_rich Low_complexity Low_complexity 1 22 0 1 1009 324 0 0 0 chr15 55606768 55606804 -47888170 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1 1009 201 78 0 89 chr15 55607587 55607643 -47887331 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 1 1009 324 0 0 0 chr15 55607814 55607850 -47887124 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 1009 227 346 9 38 chr15 55607982 55608087 -47886887 - MIRb SINE MIR -156 112 11 1 1009 21 0 0 0 chr15 55608097 55608118 -47886856 + AT_rich Low_complexity Low_complexity 1 21 0 1 1009 440 252 69 69 chr15 55608751 55608777 -47886197 - B1F SINE Alu 0 149 130 1 1009 995 158 0 0 chr15 55608777 55608916 -47886058 + B1_Mur3 SINE Alu 1 139 -10 1 1009 405 0 0 0 chr15 55608916 55608961 -47886013 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 1 1009 440 252 69 69 chr15 55608961 55609078 -47885896 - B1F SINE Alu -20 129 6 1 1009 231 289 36 63 chr15 55609480 55609591 -47885383 + LTR33 LTR ERVL 268 375 -140 1 1009 359 41 20 0 chr15 55610655 55610704 -47884270 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 1009 270 300 130 37 chr15 55611381 55611651 -47883323 + HAL1 LINE L1 765 1059 -1448 1 1009 297 109 0 0 chr15 55612024 55612070 -47882904 + (TATG)n Simple_repeat Simple_repeat 4 49 0 1 1009 204 200 40 0 chr15 55612246 55612296 -47882678 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 1 1009 350 300 11 0 chr15 55612408 55612498 -47882476 - PB1 SINE Alu -20 107 17 1 1009 928 154 7 20 chr15 55612605 55612751 -47882223 + B1_Mus2 SINE Alu 2 145 -2 1 1009 972 184 9 66 chr15 55612792 55613019 -47881955 - Lx7 LINE L1 -11 7685 7472 1 1009 236 263 123 66 chr15 55613341 55613393 -47881581 - RSINE1 SINE B4 -31 134 6 1 1009 305 304 0 14 chr15 55613393 55613463 -47881511 - ID4 SINE ID -10 73 5 1 1009 478 246 82 30 chr15 55613478 55613612 -47881362 - ID_B1 SINE B4 -2 222 82 1 1009 333 356 24 0 chr15 55614048 55614243 -47880731 - MLT1A1 LTR MaLR -8 400 154 1 1009 1054 328 163 29 chr15 55614257 55614743 -47880231 - MLT1A0-int LTR MaLR -235 1500 950 1 1009 1313 310 139 23 chr15 55614781 55615511 -47879463 - MLT1A0-int LTR MaLR -914 821 2 1 1009 676 315 59 61 chr15 55615512 55615852 -47879122 - MLT1A0 LTR MaLR 0 365 33 1 1009 957 304 99 47 chr15 55615852 55616346 -47878628 - Lx8 LINE L1 -36 7437 6918 1 1009 310 264 14 0 chr15 55616347 55616419 -47878555 - MLT1A1 LTR MaLR -325 83 11 1 1009 316 167 28 0 chr15 55616715 55616787 -47878187 + G-rich Low_complexity Low_complexity 2 75 0 1 1009 270 381 14 76 chr15 55617627 55617772 -47877202 + MamRep605 Unknown Unknown 630 765 -111 1 1009 2288 211 45 52 chr15 55619422 55619548 -47875426 - RMER1B Other Other -24 1042 919 1 1009 279 0 0 0 chr15 55619548 55619579 -47875395 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 1 1009 2288 212 45 51 chr15 55619579 55620067 -47874907 - RMER1B Other Other -148 918 379 1 1009 252 245 52 31 chr15 55620658 55620755 -47874219 - L1M5 LINE L1 -3721 2494 2396 1 1009 2533 118 26 10 chr15 55620761 55621148 -47873826 + Lx2 LINE L1 6605 6997 0 1 1009 218 217 0 0 chr15 55621355 55621401 -47873573 + T-rich Low_complexity Low_complexity 1 46 0 1 1009 405 106 0 0 chr15 55621860 55621899 -47873075 + (T)n Simple_repeat Simple_repeat 1 39 0 1 1009 834 104 168 0 chr15 55621899 55622024 -47872950 - B1_Mus1 SINE Alu -1 147 2 1 1009 405 106 0 0 chr15 55622024 55622050 -47872924 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1009 372 22 0 0 chr15 55622272 55622317 -47872657 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 1 1009 417 229 42 0 chr15 55623890 55623986 -47870988 + Lx9 LINE L1 6749 6848 -796 1 1009 1475 307 69 23 chr15 55623996 55624646 -47870328 + Lx8 LINE L1 6793 7472 -1 1 1009 823 177 28 14 chr15 55625307 55625450 -47869524 + B1_Mur3 SINE Alu 5 149 0 1 1009 276 250 0 0 chr15 55625504 55625600 -47869374 + (TA)n Simple_repeat Simple_repeat 1 96 0 1 1009 230 216 70 30 chr15 55625601 55625701 -47869273 - Lx9 LINE L1 -128 7516 7413 1 1009 323 105 18 0 chr15 55626790 55626847 -47868127 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1009 311 0 0 25 chr15 55627227 55627267 -47867707 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1009 272 91 23 0 chr15 55628905 55628949 -47866025 + (TAA)n Simple_repeat Simple_repeat 3 47 0 1 1009 416 274 99 125 chr15 55629031 55629223 -47865751 + B3A SINE B2 8 194 -4 2 1009 330 239 14 0 chr15 55629959 55630030 -47864944 - ID4 SINE ID -10 73 2 2 1009 989 245 91 47 chr15 55630681 55631030 -47863944 - MTE2b LTR MaLR 0 379 21 2 1009 241 343 80 17 chr15 55631407 55631582 -47863392 - MIR SINE MIR -76 186 1 2 1009 234 0 0 0 chr15 55631608 55631634 -47863340 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1009 619 223 49 9 chr15 55632671 55632850 -47862124 + MIRc SINE MIR 3 199 -9 2 1009 409 206 19 0 chr15 55632912 55633019 -47861955 + CT-rich Low_complexity Low_complexity 2 110 0 2 1009 313 82 61 0 chr15 55633023 55633072 -47861902 + HAL1-3A_ME LINE L1 1977 2028 -830 2 1009 393 147 0 0 chr15 55633072 55633167 -47861807 + (CA)n Simple_repeat Simple_repeat 2 96 0 2 1009 584 327 42 51 chr15 55633176 55633392 -47861582 + B4A SINE B4 1 214 -78 2 1009 936 186 0 0 chr15 55633393 55633538 -47861436 + B1_Mus1 SINE Alu 2 146 -2 2 1009 2073 122 32 6 chr15 55633763 55634076 -47860898 + Lx4A LINE L1 6737 7057 -1 2 1009 236 283 0 0 chr15 55634553 55634613 -47860361 - Lx8 LINE L1 -3 7470 7411 2 1009 359 317 0 0 chr15 55634613 55634695 -47860279 - ID2 SINE ID 0 83 2 2 1009 180 351 30 69 chr15 55634862 55634963 -47860011 - L2b LINE L2 -54 3321 3225 2 1009 355 292 116 35 chr15 55635398 55635562 -47859412 + MIR SINE MIR 29 203 -59 2 1009 393 22 0 0 chr15 55635562 55635608 -47859366 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1009 355 292 116 35 chr15 55635608 55635642 -47859332 + MIR SINE MIR 204 242 -20 2 1009 535 328 44 15 chr15 55635919 55636123 -47858851 - MER58A DNA MER1_type -8 216 7 2 1009 207 244 314 0 chr15 55636761 55636847 -47858127 + MIRb SINE MIR 88 200 -68 2 1009 233 317 20 72 chr15 55637028 55637181 -47857793 + L3 LINE CR1 4337 4481 -8 2 1009 231 296 63 35 chr15 55637266 55637375 -47857599 + MIRc SINE MIR 60 171 -37 2 1009 304 333 98 17 chr15 55637403 55637577 -47857397 + MIRc SINE MIR 30 217 -51 2 1009 644 56 11 0 chr15 55638221 55638310 -47856664 + (GA)n Simple_repeat Simple_repeat 1 90 0 2 1009 342 0 0 0 chr15 55638938 55638976 -47855998 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1009 365 327 4 0 chr15 55638976 55639080 -47855894 - PB1D10 SINE Alu -38 111 4 2 1009 830 238 20 40 chr15 55639107 55639287 -47855687 - MTE2b LTR MaLR 0 379 204 2 1009 1172 123 6 0 chr15 55639287 55639458 -47855516 + B2_Mm2 SINE B2 2 173 -22 2 1009 500 330 80 49 chr15 55639419 55639460 -47855514 - MTE2b LTR MaLR -138 241 207 2 1009 822 21 0 0 chr15 55639460 55639556 -47855418 + (GAA)n Simple_repeat Simple_repeat 2 97 0 2 1009 500 330 80 49 chr15 55639556 55639740 -47855234 - MTE2b LTR MaLR -173 206 9 2 1009 240 294 31 31 chr15 55639863 55639993 -47854981 + L1M5 LINE L1 3645 3774 -2372 2 1009 2651 62 0 3 chr15 55640136 55640461 -47854513 - L1Md_F2 LINE L1 -1 6581 6258 2 1009 24 53 0 0 chr15 55640470 55640508 -47854466 + AT_rich Low_complexity Low_complexity 1 38 0 2 1009 279 0 0 0 chr15 55640617 55640648 -47854326 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 2 1009 201 300 14 0 chr15 55640845 55640915 -47854059 + GA-rich Low_complexity Low_complexity 2 72 0 2 1009 564 329 125 25 chr15 55640943 55641183 -47853791 + B4 SINE B4 2 265 -27 2 1009 405 90 0 0 chr15 55641313 55641380 -47853594 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1009 8976 12 1 0 chr15 55642711 55643980 -47850994 - L1Md_A LINE L1 0 6582 5313 2 1009 562 260 13 20 chr15 55644140 55644289 -47850685 - B3A SINE B2 -49 149 2 2 1009 227 200 31 77 chr15 55644442 55644507 -47850467 + RLTR3_Mm LTR ERVK 1004 1065 -263 2 1009 22 56 0 0 chr15 55644748 55644784 -47850190 + AT_rich Low_complexity Low_complexity 1 36 0 2 1009 411 21 0 0 chr15 55644789 55644837 -47850137 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1009 185 314 73 37 chr15 55645391 55645500 -47849474 - MIRc SINE MIR -126 142 30 2 1009 369 0 0 0 chr15 55646187 55646228 -47848746 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1009 497 181 8 32 chr15 55647442 55647558 -47847416 + B1_Mur3 SINE Alu 1 117 -3 2 1009 679 222 0 36 chr15 55647682 55647822 -47847152 + B4 SINE B4 84 218 -74 2 1009 198 171 0 0 chr15 55647831 55647872 -47847102 + GA-rich Low_complexity Low_complexity 1 41 0 2 1009 238 335 49 55 chr15 55648349 55648584 -47846390 + L2c LINE L2 3136 3380 -7 2 1009 243 273 29 39 chr15 55649338 55649441 -47845533 - ORR1D1 LTR MaLR 0 379 278 2 1009 378 277 50 78 chr15 55649482 55649662 -47845312 - ORR1D1 LTR MaLR -195 179 5 2 1009 1095 206 13 49 chr15 55650486 55650710 -47844264 - B3 SINE B2 0 216 1 2 1009 207 0 0 0 chr15 55651032 55651055 -47843919 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1009 6554 117 16 16 chr15 55651500 55652470 -47842504 + Lx2 LINE L1 6028 6997 0 2 1009 1427 105 110 0 chr15 55652711 55652911 -47842063 + URR1A DNA MER1_type 5 226 0 2 1009 212 200 0 18 chr15 55652915 55652971 -47842003 + GA-rich Low_complexity Low_complexity 1 55 0 2 1009 972 169 0 0 chr15 55654135 55654313 -47840661 + CT-rich Low_complexity Low_complexity 1 178 0 2 1009 396 0 0 0 chr15 55654315 55654359 -47840615 + (TTTC)n Simple_repeat Simple_repeat 4 47 0 2 1009 318 319 77 30 chr15 55655100 55655268 -47839706 + Lx8 LINE L1 7278 7453 -20 2 1009 486 291 174 23 chr15 55656002 55656220 -47838754 - MER2 DNA MER2_type -8 337 87 2 1009 662 290 104 5 chr15 55656464 55656665 -47838309 - B4A SINE B4 -71 221 1 2 1009 1792 219 16 32 chr15 55656902 55657274 -47837700 - ORR1D1 LTR MaLR -8 366 1 2 1009 378 0 0 0 chr15 55657563 55657605 -47837369 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1009 294 331 108 36 chr15 55657625 55657983 -47836991 + ORR1E LTR MaLR 1 384 0 2 1009 496 324 88 15 chr15 55659862 55660135 -47834839 - Lx7 LINE L1 -1800 5896 5604 2 1009 357 82 0 0 chr15 55660135 55660184 -47834790 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1009 181 362 88 0 chr15 55663373 55663453 -47831521 + MIRm SINE MIR 92 178 -98 2 1009 407 81 48 0 chr15 55663487 55663549 -47831425 + Lx5 LINE L1 5780 5844 -1206 2 1009 2225 93 0 3 chr15 55663542 55663845 -47831129 - L1_Mm LINE L1 -316 5567 5266 2 1009 6565 74 24 2 chr15 55663846 55664673 -47830301 + L1_Mus4 LINE L1 5790 6634 -2 2 1009 4743 188 38 16 chr15 55664675 55665795 -47829179 + Lx5 LINE L1 5834 7048 -2 2 1009 229 196 20 0 chr15 55665807 55665854 -47829120 + GA-rich Low_complexity Low_complexity 1 47 0 2 1009 1180 79 11 0 chr15 55665854 55666032 -47828942 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 2 1009 209 343 10 0 chr15 55666032 55666083 -47828891 + polypurine Low_complexity Low_complexity 51 101 0 2 1009 216 0 0 0 chr15 55666303 55666327 -47828647 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1009 1080 209 5 28 chr15 55666595 55666811 -47828163 - URR1A DNA MER1_type -15 211 1 2 1009 234 191 0 21 chr15 55667496 55667544 -47827430 + A-rich Low_complexity Low_complexity 5 51 0 2 1009 183 42 0 0 chr15 55667602 55667626 -47827348 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 1009 190 349 9 28 chr15 55668645 55668754 -47826220 + MIR SINE MIR 146 252 -10 2 1009 946 275 50 105 chr15 55669690 55669785 -47825189 + MLT1B LTR MaLR 44 141 -249 2 1009 2366 151 59 3 chr15 55669785 55670158 -47824816 + ORR1B1 LTR MaLR 1 394 0 2 1009 946 275 50 105 chr15 55670158 55670424 -47824550 + MLT1B LTR MaLR 142 385 -5 2 1009 204 40 0 0 chr15 55671308 55671333 -47823641 + (CATAC)n Simple_repeat Simple_repeat 1 25 0 2 1009 558 0 0 0 chr15 55671333 55671395 -47823579 + (CACAT)n Simple_repeat Simple_repeat 3 64 0 2 1009 1302 80 6 11 chr15 55671427 55671605 -47823369 + L1Md_T LINE L1 6406 6582 0 2 1009 1050 144 0 0 chr15 55672253 55672399 -47822575 - B1_Mus1 SINE Alu 0 148 3 2 1009 628 302 116 32 chr15 55672556 55672867 -47822107 + MLT1A0 LTR MaLR 1 337 -28 2 1009 1610 179 92 50 chr15 55672928 55673351 -47821623 - RMER10A LTR ERVL -1 441 1 2 1009 1014 162 6 55 chr15 55674067 55674250 -47820724 + RMER10A LTR ERVL 1 174 -268 2 1009 245 231 8 0 chr15 55674366 55674487 -47820487 + (TA)n Simple_repeat Simple_repeat 2 123 0 2 1009 180 0 0 0 chr15 55675535 55675555 -47819419 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 1009 351 0 0 0 chr15 55675555 55675593 -47819381 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1009 511 350 31 0 chr15 55677940 55678103 -47816871 - B4A SINE B4 -6 286 119 2 1009 939 96 89 0 chr15 55678148 55678283 -47816691 - B1_Mus2 SINE Alu 0 147 1 2 1009 724 292 0 28 chr15 55679707 55679883 -47815091 - ID_B1 SINE B4 -51 173 3 2 1009 204 316 0 0 chr15 55681005 55681062 -47813912 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 2 1009 1253 61 0 0 chr15 55683090 55683237 -47811737 + B1_Mus1 SINE Alu 1 147 -1 2 1009 342 67 0 0 chr15 55683244 55683289 -47811685 + (CAAG)n Simple_repeat Simple_repeat 2 46 0 2 1009 182 352 130 19 chr15 55684893 55685055 -47809919 + MIRb SINE MIR 71 250 -18 2 1009 191 88 29 0 chr15 55685452 55685486 -47809488 + (CATA)n Simple_repeat Simple_repeat 2 36 0 2 1009 254 247 34 0 chr15 55685486 55685575 -47809399 + (TA)n Simple_repeat Simple_repeat 1 92 0 2 1009 1330 146 26 40 chr15 55685820 55686048 -47808926 - URR1B DNA MER1_type 0 225 1 2 1009 378 0 0 0 chr15 55687573 55687615 -47807359 + (A)n Simple_repeat Simple_repeat 1 42 0 2 1009 189 0 0 0 chr15 55687615 55687636 -47807338 + (GA)n Simple_repeat Simple_repeat 2 22 0 2 1009 265 175 0 91 chr15 55687639 55687727 -47807247 + (CAGAGA)n Simple_repeat Simple_repeat 5 84 0 2 1009 471 338 56 9 chr15 55688232 55688465 -47806509 - MIR SINE MIR -16 246 3 3 1009 342 0 0 0 chr15 55690106 55690144 -47804830 + (TTG)n Simple_repeat Simple_repeat 2 39 0 3 1009 244 319 79 75 chr15 55691057 55691123 -47803851 + MLT1K LTR MaLR 381 446 -164 3 1009 1191 56 3 32 chr15 55691123 55691496 -47803478 + (GA)n Simple_repeat Simple_repeat 1 361 0 3 1009 307 268 76 36 chr15 55691496 55691653 -47803321 + MLT1K LTR MaLR 447 608 -2 3 1009 313 289 40 0 chr15 55692203 55692279 -47802695 - ID4 SINE ID 0 83 5 3 1009 207 0 0 0 chr15 55692533 55692556 -47802418 + (CTATT)n Simple_repeat Simple_repeat 3 25 0 3 1009 284 242 32 0 chr15 55693240 55693302 -47801672 - MER58B DNA MER1_type 0 341 278 3 1009 423 205 147 16 chr15 55693348 55693477 -47801497 - MER58B DNA MER1_type -158 183 38 3 1009 363 300 39 20 chr15 55693724 55693877 -47801097 + L1MCa LINE L1 415 570 -5938 3 1009 999 272 98 47 chr15 55694025 55694384 -47800590 + MTEb LTR MaLR 3 379 0 3 1009 521 283 65 15 chr15 55694580 55694781 -47800193 + L1MCb LINE L1 650 860 -5185 3 1009 240 59 0 0 chr15 55694797 55694831 -47800143 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1009 339 25 0 0 chr15 55695158 55695198 -47799776 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 3 1009 1031 303 51 4 chr15 55695199 55695474 -47799500 - B4 SINE B4 -2 290 3 3 1009 271 23 0 65 chr15 55696884 55696930 -47798044 + (TTTG)n Simple_repeat Simple_repeat 3 45 0 3 1009 21 0 0 0 chr15 55697510 55697531 -47797443 + AT_rich Low_complexity Low_complexity 1 21 0 3 1009 319 303 91 0 chr15 55698656 55698788 -47796186 + B1F1 SINE Alu 1 144 -5 3 1009 233 211 0 34 chr15 55698796 55698855 -47796119 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 3 1009 267 37 71 36 chr15 55699161 55699217 -47795757 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 3 1009 243 0 0 0 chr15 55699326 55699353 -47795621 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1009 403 268 73 31 chr15 55699699 55699843 -47795131 + MIR SINE MIR 21 180 -88 3 1009 651 243 147 29 chr15 55700908 55701237 -47793737 - MTD LTR MaLR -14 405 1 3 1009 2166 83 31 16 chr15 55703023 55703340 -47791634 + RLTRETN_Mm LTR ERVK 1 322 0 3 126 25888 33 11 10 chr15 55703340 55708243 -47786731 + MMETn-int LTR ERVK 1 4844 0 3 1010 2166 83 31 16 chr15 55708243 55708560 -47786414 + RLTRETN_Mm LTR ERVK 1 322 0 3 1010 225 309 120 21 chr15 55709997 55710139 -47784835 - L2 LINE L2 -829 2590 2435 3 1010 297 0 0 0 chr15 55710328 55710361 -47784613 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1010 274 312 16 49 chr15 55710716 55710901 -47784073 + GA-rich Low_complexity Low_complexity 2 180 0 3 1010 302 345 17 17 chr15 55711390 55711505 -47783469 + MamRep4096 DNA hAT? 309 423 -3 3 1010 303 226 31 6 chr15 55712157 55712317 -47782657 + (TG)n Simple_repeat Simple_repeat 1 164 0 3 1010 661 282 44 25 chr15 55712317 55712477 -47782497 - RSINE1 SINE B4 0 165 3 3 1010 393 309 10 0 chr15 55713536 55713633 -47781341 - PB1D10 SINE Alu -14 103 6 3 1010 232 239 13 107 chr15 55713570 55713645 -47781329 - B4 SINE B4 -145 147 80 3 1010 2994 15 0 12 chr15 55713978 55714363 -47780611 + L1Md_T LINE L1 6255 6582 0 3 1010 202 170 21 21 chr15 55714561 55714609 -47780365 + (TTCA)n Simple_repeat Simple_repeat 4 51 0 3 1010 469 305 7 0 chr15 55714848 55714989 -47779985 + B4A SINE B4 3 144 -148 3 1010 571 272 22 7 chr15 55715036 55715173 -47779801 + B4 SINE B4 134 272 -20 3 1010 498 98 0 0 chr15 55715441 55715523 -47779451 + (TC)n Simple_repeat Simple_repeat 1 82 0 3 1010 590 144 0 58 chr15 55715531 55715722 -47779252 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 1010 306 50 0 0 chr15 55715723 55715763 -47779211 + (GA)n Simple_repeat Simple_repeat 2 41 0 3 1010 233 243 89 68 chr15 55716001 55716147 -47778827 + HAL1 LINE L1 2281 2429 -78 3 1010 542 305 83 57 chr15 55716676 55717078 -47777896 - MLT1C LTR MaLR -1 389 1 3 1010 272 57 0 0 chr15 55717872 55717907 -47777067 + U2 snRNA snRNA 1 35 -153 3 1010 3813 196 57 52 chr15 55717913 55718203 -47776771 - Lx9 LINE L1 -23 7621 7326 3 1010 224 59 0 29 chr15 55718203 55718238 -47776736 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 3 1010 3813 196 57 52 chr15 55718238 55718908 -47776066 - Lx9 LINE L1 -319 7325 6656 3 1010 318 26 0 0 chr15 55719655 55719694 -47775280 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1010 1051 218 150 26 chr15 55719916 55720162 -47774812 + Lx9 LINE L1 7257 7502 -142 3 1010 420 20 0 0 chr15 55720162 55720211 -47774763 + (GA)n Simple_repeat Simple_repeat 1 49 0 3 1010 1051 218 150 26 chr15 55720211 55720304 -47774670 + Lx9 LINE L1 7503 7637 -7 3 1010 212 348 95 15 chr15 55721819 55721956 -47773018 - MIRb SINE MIR -37 231 84 3 1010 612 107 0 0 chr15 55722106 55722209 -47772765 + (CA)n Simple_repeat Simple_repeat 2 104 0 3 1010 317 326 21 28 chr15 55722215 55722357 -47772617 + MER5B DNA MER1_type 38 178 0 3 1010 495 304 47 89 chr15 55722377 55722590 -47772384 + MER20 DNA MER1_type 9 212 -7 3 1010 184 176 29 0 chr15 55723239 55723307 -47771667 + (TA)n Simple_repeat Simple_repeat 1 70 0 3 1010 266 123 100 0 chr15 55723352 55723482 -47771492 + (TA)n Simple_repeat Simple_repeat 1 143 0 3 1010 365 326 28 32 chr15 55723629 55723876 -47771098 + HAL1 LINE L1 950 1195 -1312 3 1010 330 305 97 71 chr15 55724195 55724421 -47770553 - MER119 DNA MER1_type -246 337 106 3 1010 360 0 0 0 chr15 55724479 55724519 -47770455 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 1010 22 35 0 0 chr15 55724531 55724560 -47770414 + AT_rich Low_complexity Low_complexity 1 29 0 3 1010 735 275 12 12 chr15 55724593 55724766 -47770208 + B3A SINE B2 26 198 0 3 1010 2697 250 104 9 chr15 55724734 55725549 -47769425 - RCHARR1 DNA MER1_type -79 895 3 3 1010 21 0 0 0 chr15 55726371 55726392 -47768582 + AT_rich Low_complexity Low_complexity 1 21 0 3 1010 270 0 0 0 chr15 55726520 55726550 -47768424 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 1010 252 188 0 0 chr15 55726710 55726774 -47768200 + (CATA)n Simple_repeat Simple_repeat 1 64 0 3 1010 1015 105 68 28 chr15 55727690 55727866 -47767108 - B2_Mm2 SINE B2 0 195 13 3 1010 237 391 80 15 chr15 55728269 55728469 -47766505 - MIR SINE MIR -36 226 14 3 1010 38 0 0 0 chr15 55728636 55728674 -47766300 + AT_rich Low_complexity Low_complexity 1 38 0 3 1010 189 254 0 0 chr15 55729606 55729661 -47765313 + CT-rich Low_complexity Low_complexity 5 59 0 3 1010 1244 128 22 11 chr15 55730019 55730201 -47764773 - B2_Mm2 SINE B2 -9 186 3 3 1010 1069 60 7 7 chr15 55730498 55730649 -47764325 + (TG)n Simple_repeat Simple_repeat 2 152 0 3 1010 335 335 15 55 chr15 55730949 55731151 -47763823 + MLT1E2 LTR MaLR 8 200 -305 3 1010 280 294 0 14 chr15 55731417 55731486 -47763488 + RSINE1 SINE B4 86 153 -12 3 1010 273 276 11 22 chr15 55731623 55731712 -47763262 + MIRc SINE MIR 111 198 -70 3 1010 344 200 141 0 chr15 55731779 55731864 -47763110 + MIR SINE MIR 133 229 -33 3 1010 249 109 0 0 chr15 55732206 55732252 -47762722 + (CAAAAA)n Simple_repeat Simple_repeat 1 46 0 3 1010 1430 232 70 36 chr15 55732336 55732694 -47762280 - ORR1D1 LTR MaLR -2 372 3 3 1010 915 286 11 44 chr15 55733184 55733455 -47761519 + B4A SINE B4 3 264 -28 3 1010 333 0 0 0 chr15 55733468 55733505 -47761469 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1010 257 297 245 45 chr15 55734049 55734204 -47760770 + MIR SINE MIR 72 257 -5 3 1010 396 128 64 0 chr15 55734279 55734388 -47760586 + (TAGA)n Simple_repeat Simple_repeat 2 117 0 3 1010 225 373 0 0 chr15 55734823 55734890 -47760084 + ID4 SINE ID 5 71 -12 3 1010 186 43 0 0 chr15 55735125 55735148 -47759826 + (TC)n Simple_repeat Simple_repeat 1 23 0 3 1010 204 74 0 0 chr15 55735148 55735175 -47759799 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1010 810 161 0 32 chr15 55735175 55735361 -47759613 + (CATA)n Simple_repeat Simple_repeat 1 180 0 3 1010 813 167 0 32 chr15 55735339 55735525 -47759449 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 3 1010 842 159 17 8 chr15 55735528 55735763 -47759211 + (CATA)n Simple_repeat Simple_repeat 1 237 0 3 1010 24 0 0 0 chr15 55736153 55736177 -47758797 + AT_rich Low_complexity Low_complexity 1 24 0 3 1010 393 22 0 0 chr15 55737033 55737079 -47757895 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 3 1010 209 196 0 21 chr15 55738097 55738144 -47756830 + (CCG)n Simple_repeat Simple_repeat 2 47 0 3 1010 1004 46 8 0 chr15 55738866 55738996 -47755978 + (GA)n Simple_repeat Simple_repeat 2 132 0 3 1010 729 132 0 0 chr15 55740021 55740165 -47754809 + (GA)n Simple_repeat Simple_repeat 1 144 0 3 1010 432 200 0 0 chr15 55740164 55740329 -47754645 + (CA)n Simple_repeat Simple_repeat 2 166 0 3 1010 384 22 0 0 chr15 55740330 55740375 -47754599 + (GA)n Simple_repeat Simple_repeat 1 45 0 3 1010 244 329 113 25 chr15 55740817 55740976 -47753998 - MIR SINE MIR -37 225 53 3 1010 252 302 52 10 chr15 55741401 55741498 -47753476 - MTEb LTR MaLR -7 372 272 3 1010 318 26 0 0 chr15 55743741 55743780 -47751194 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 1010 251 330 33 22 chr15 55744445 55744535 -47750439 + Tigger7 DNA MER2_type 4 94 -2397 3 1010 235 353 109 0 chr15 55744904 55745023 -47749951 - MIRb SINE MIR -3 265 134 3 1010 451 321 95 0 chr15 55745302 55745439 -47749535 + MLT1A0 LTR MaLR 1 150 -215 3 1010 316 94 55 36 chr15 55745725 55745780 -47749194 + PB1D9 SINE Alu 4 59 -61 3 1010 355 0 0 162 chr15 55745782 55745973 -47749001 + (CAGAG)n Simple_repeat Simple_repeat 1 160 0 3 1010 248 111 0 0 chr15 55745976 55746012 -47748962 + PB1D9 SINE Alu 42 77 -43 3 1010 41 0 0 0 chr15 55746014 55746055 -47748919 + AT_rich Low_complexity Low_complexity 1 41 0 3 1010 370 169 15 0 chr15 55746055 55746120 -47748854 + MLT1A0 LTR MaLR 342 407 -1 3 1010 286 219 0 59 chr15 55746140 55746208 -47748766 + MLT1A0-int LTR MaLR 21 84 -1651 3 1010 399 278 31 0 chr15 55746299 55746396 -47748578 + ID_B1 SINE B4 73 172 -52 3 1010 559 237 59 0 chr15 55746628 55746746 -47748228 + B1_Mur1 SINE Alu 19 143 -6 3 1010 842 303 65 24 chr15 55746742 55747083 -47747891 + MLT1A0-int LTR MaLR 232 586 -1149 3 1010 1128 362 73 17 chr15 55747171 55747756 -47747218 + MLT1A0-int LTR MaLR 1094 1711 -24 3 1010 407 272 112 76 chr15 55747856 55748079 -47746895 + MLT1A1 LTR MaLR 176 406 -2 3 1010 545 270 73 76 chr15 55748966 55749307 -47745667 - L1MC4 LINE L1 -924 7118 6779 3 1010 3208 60 52 47 chr15 55749314 55749736 -47745238 + L1_Mus2 LINE L1 6143 6566 0 4 1010 311 285 101 46 chr15 55749803 55750020 -47744954 - L1MC4 LINE L1 -1311 6571 6343 3 1010 22 0 0 0 chr15 55750167 55750189 -47744785 + AT_rich Low_complexity Low_complexity 1 22 0 4 1010 378 315 0 84 chr15 55750790 55750932 -47744042 + MER58B DNA MER1_type 173 302 -39 4 1010 180 97 0 0 chr15 55751102 55751133 -47743841 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1010 1001 98 0 0 chr15 55751176 55751309 -47743665 + B1_Mus2 SINE Alu 9 141 -6 4 1010 213 39 0 0 chr15 55751311 55751337 -47743637 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 4 1010 362 21 0 21 chr15 55751554 55751602 -47743372 + (CAA)n Simple_repeat Simple_repeat 1 47 0 4 1010 366 196 19 9 chr15 55752054 55752162 -47742812 + CT-rich Low_complexity Low_complexity 1 109 0 4 1010 23 33 0 0 chr15 55752731 55752761 -47742213 + AT_rich Low_complexity Low_complexity 1 30 0 4 1010 2177 174 52 16 chr15 55752839 55752889 -47742085 - RLTR20B3 LTR ERVK -42 535 485 4 1010 372 22 0 0 chr15 55752889 55752934 -47742040 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1010 2177 181 53 21 chr15 55752934 55753373 -47741601 - RLTR20B3 LTR ERVK -93 484 21 4 1010 485 312 120 0 chr15 55754760 55754968 -47740006 - MIRb SINE MIR -34 234 2 4 1010 185 310 34 45 chr15 55755686 55755774 -47739200 - MIR SINE MIR -68 194 108 4 1010 825 333 114 27 chr15 55755998 55756473 -47738501 - Lx8 LINE L1 -181 7292 6777 4 1010 423 0 0 0 chr15 55756823 55756870 -47738104 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1010 288 310 85 42 chr15 55756950 55757068 -47737906 + B1F SINE Alu 25 147 -2 4 1010 334 329 26 7 chr15 55758069 55758222 -47736752 + L1MC LINE L1 5602 5757 -2125 4 1010 722 302 105 35 chr15 55758581 55758838 -47736136 - B4 SINE B4 -17 275 1 4 1010 296 372 61 30 chr15 55759472 55759702 -47735272 - MLT1J LTR MaLR -3 509 273 4 1010 339 311 125 7 chr15 55759745 55759881 -47735093 + ID_B1 SINE B4 73 224 0 4 1010 240 351 0 0 chr15 55761031 55761105 -47733869 - ID4 SINE ID -2 81 8 4 1010 414 265 68 0 chr15 55761111 55761243 -47733731 + MER58B DNA MER1_type 79 219 -122 4 1010 210 325 80 55 chr15 55761573 55761736 -47733238 + L2c LINE L2 3148 3314 -73 4 1010 295 325 364 27 chr15 55762272 55762453 -47732521 + MER47B DNA MER2_type 156 397 -21 4 1010 317 254 0 0 chr15 55763599 55763666 -47731308 - ID4_ SINE ID -14 69 3 4 1010 420 279 30 37 chr15 55763669 55763803 -47731171 - B1F1 SINE Alu 0 149 17 4 1010 210 263 19 104 chr15 55764625 55764731 -47730243 - L2 LINE L2 -1357 2062 1966 4 1010 312 91 0 0 chr15 55765160 55765204 -47729770 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 4 1010 420 295 162 21 chr15 55765237 55765379 -47729595 - RSINE1 SINE B4 0 165 4 4 1010 7784 57 12 11 chr15 55765464 55765531 -47729443 - L1Md_F2 LINE L1 -6 6576 6511 4 1010 1651 54 0 0 chr15 55765531 55765717 -47729257 + B2_Mm1t SINE B2 2 187 -6 4 1010 7784 57 12 11 chr15 55765717 55766638 -47728336 - L1Md_F2 LINE L1 -72 6510 5587 4 1010 244 91 0 0 chr15 55766660 55766693 -47728281 + MusHAL1 LINE L1 1820 1852 -860 4 1010 3453 203 73 124 chr15 55766694 55767817 -47727157 - RMER1B Other Other 0 1066 1 4 1010 884 109 54 0 chr15 55768160 55768307 -47726667 - URR1A DNA MER1_type -1 225 71 4 1010 2140 189 68 8 chr15 55768348 55768414 -47726560 - MTD LTR MaLR 0 419 349 4 1010 198 0 0 0 chr15 55768414 55768436 -47726538 + (TTG)n Simple_repeat Simple_repeat 3 24 0 4 1010 2140 189 68 8 chr15 55768436 55768763 -47726211 - MTD LTR MaLR -71 348 2 4 1010 735 225 20 21 chr15 55768960 55769148 -47725826 - B3 SINE B2 -8 187 1 4 1010 473 259 45 111 chr15 55770885 55771128 -47723846 + L1M2 LINE L1 4563 4789 -1354 4 1010 1214 325 52 11 chr15 55771137 55771576 -47723398 + Lx8 LINE L1 6944 7400 -73 4 1010 233 319 84 0 chr15 55771628 55771747 -47723227 + L1_Mur3 LINE L1 4751 4879 -1001 4 1010 330 375 44 0 chr15 55772382 55772542 -47722432 + MLT1E1 LTR MaLR 464 630 -24 4 1010 478 245 38 0 chr15 55772807 55772913 -47722061 + PB1D10 SINE Alu 1 110 -7 4 1010 1058 280 83 14 chr15 55772946 55773297 -47721677 + MTE2b LTR MaLR 1 375 -4 4 1010 387 0 0 0 chr15 55773297 55773340 -47721634 + (GGAA)n Simple_repeat Simple_repeat 2 44 0 4 1010 790 295 10 20 chr15 55773732 55773929 -47721045 + B3A SINE B2 1 195 -3 4 1010 234 0 0 0 chr15 55775283 55775309 -47719665 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1010 684 141 0 0 chr15 55775660 55775795 -47719179 + (TG)n Simple_repeat Simple_repeat 2 136 0 4 1010 3365 55 25 0 chr15 55776443 55776844 -47718130 - RLTR10A LTR ERVK 0 411 1 4 1010 552 229 40 60 chr15 55777014 55777163 -47717811 - B1_Mus2 SINE Alu -1 146 1 4 1010 400 210 74 74 chr15 55777576 55777684 -47717290 + PB1D10 SINE Alu 1 108 -9 4 1010 270 0 0 0 chr15 55778130 55778160 -47716814 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 4 1010 369 123 0 0 chr15 55778164 55778229 -47716745 + (TCTG)n Simple_repeat Simple_repeat 4 68 0 4 1010 387 295 61 15 chr15 55778715 55778846 -47716128 - B1F2 SINE Alu -2 147 11 4 1010 590 60 12 0 chr15 55778849 55778932 -47716042 + (TC)n Simple_repeat Simple_repeat 1 84 0 4 1010 350 317 106 73 chr15 55779071 55779332 -47715642 + Lx9 LINE L1 6135 6418 -1226 4 1010 1151 98 75 0 chr15 55779332 55779505 -47715469 + B2_Mm2 SINE B2 1 186 -9 4 1010 350 317 106 73 chr15 55779505 55779583 -47715391 + Lx9 LINE L1 6419 6485 -1159 4 1010 857 297 57 11 chr15 55779611 55779965 -47715009 + Lx9 LINE L1 6588 6957 -687 4 1010 329 136 15 0 chr15 55780056 55780122 -47714852 + (TA)n Simple_repeat Simple_repeat 2 68 0 4 1010 207 133 0 0 chr15 55780437 55780482 -47714492 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 4 1010 602 323 65 111 chr15 55780546 55780943 -47714031 + MTEa LTR MaLR 1 379 0 4 1010 761 325 55 25 chr15 55781298 55781535 -47713439 + B4A SINE B4 38 281 -11 4 1010 186 71 0 0 chr15 55782153 55782181 -47712793 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 4 1010 387 0 0 0 chr15 55783478 55783521 -47711453 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1010 232 217 111 78 chr15 55783526 55783616 -47711358 + MLT1A LTR MaLR 54 146 -228 4 1010 184 370 49 25 chr15 55785641 55785763 -47709211 + MER5B DNA MER1_type 34 158 -20 4 1010 405 0 0 0 chr15 55786891 55786936 -47708038 + (TC)n Simple_repeat Simple_repeat 1 45 0 4 1010 351 0 0 0 chr15 55786936 55786974 -47708000 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1010 327 281 61 0 chr15 55787042 55787156 -47707818 + MLT1C LTR MaLR 75 195 -272 4 1010 207 0 0 0 chr15 55787308 55787331 -47707643 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1010 471 266 0 0 chr15 55787397 55787506 -47707468 - PB1D10 SINE Alu -5 112 4 4 1010 264 339 107 66 chr15 55787670 55787913 -47707061 + Zaphod DNA Tip100 2489 2741 -1290 4 1010 4516 224 14 25 chr15 55787947 55789155 -47705819 + Lx6 LINE L1 5500 6697 -763 4 1010 2608 134 0 35 chr15 55789154 55789633 -47705341 - L1_Mus3 LINE L1 -486 5397 4936 4 1010 7279 77 13 14 chr15 55789629 55790824 -47704150 + L1_Mus3 LINE L1 5440 6638 0 4 1010 1496 22 0 6 chr15 55790845 55791026 -47703948 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 1010 827 191 84 44 chr15 55791026 55791251 -47703723 + Lx6 LINE L1 6684 6917 -543 4 1010 855 186 185 23 chr15 55791251 55791510 -47703464 + RMER4B LTR ERVK 1 301 -284 4 1010 2077 214 102 10 chr15 55791562 55792053 -47702921 + Lx6 LINE L1 6912 7447 -13 4 1010 869 262 79 3 chr15 55792135 55792464 -47702510 + Zaphod DNA Tip100 3350 3703 -328 4 1010 195 100 0 0 chr15 55792474 55792504 -47702470 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1010 627 327 83 20 chr15 55792578 55792831 -47702143 - B4A SINE B4 -23 269 1 4 1010 563 29 0 0 chr15 55793275 55793344 -47701630 + B1_Mus2 SINE Alu 77 145 -2 4 1010 232 49 0 68 chr15 55793345 55793389 -47701585 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 4 1010 730 308 101 20 chr15 55793425 55793770 -47701204 - MTD LTR MaLR -44 375 3 4 1010 880 173 147 5 chr15 55793947 55794145 -47700829 + URR1A DNA MER1_type 1 226 0 4 1010 1236 195 92 7 chr15 55794361 55794655 -47700319 - L1_Mur2 LINE L1 -987 4890 4572 4 1010 3755 248 52 61 chr15 55794660 55795917 -47699057 + Lx5 LINE L1 5606 6851 -199 4 1010 2066 184 81 34 chr15 55796012 55796081 -47698893 - RLTR16 LTR ERVK -13 492 415 4 1010 351 0 0 0 chr15 55796081 55796120 -47698854 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1010 288 0 0 0 chr15 55796120 55796151 -47698823 + (GA)n Simple_repeat Simple_repeat 2 33 0 4 1010 2066 184 81 34 chr15 55796151 55796547 -47698427 - RLTR16 LTR ERVK -91 414 5 4 1010 391 267 83 62 chr15 55796556 55796748 -47698226 + Lx6 LINE L1 7265 7460 0 4 1010 1828 309 30 19 chr15 55797644 55798310 -47696664 - Lx8 LINE L1 -154 7319 6647 4 1010 821 129 13 23 chr15 55798996 55799312 -47695662 + (CA)n Simple_repeat Simple_repeat 1 312 0 4 1010 336 111 0 0 chr15 55799333 55799396 -47695578 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 1010 429 20 0 0 chr15 55799396 55799446 -47695528 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1010 1049 204 30 0 chr15 55799733 55799934 -47695040 - B3 SINE B2 -4 212 6 4 1010 220 107 39 39 chr15 55800287 55800365 -47694609 + T-rich Low_complexity Low_complexity 2 79 0 4 1010 569 249 164 75 chr15 55800566 55800708 -47694266 - Lx9 LINE L1 -20 7624 7490 4 1010 585 123 0 0 chr15 55800708 55800814 -47694160 + (CA)n Simple_repeat Simple_repeat 1 106 0 4 1010 569 249 164 75 chr15 55800814 55801122 -47693852 - Lx9 LINE L1 -155 7489 7134 4 1010 506 246 66 15 chr15 55801142 55801278 -47693696 - B1F2 SINE Alu -4 145 3 4 1010 383 301 68 86 chr15 55801471 55801751 -47693223 - B4A SINE B4 -17 275 1 4 1010 345 140 0 0 chr15 55803352 55803409 -47691565 + (A)n Simple_repeat Simple_repeat 1 57 0 4 1010 1074 216 39 55 chr15 55803703 55803958 -47691016 - ORR1D2 LTR MaLR 0 370 120 4 1010 457 224 57 49 chr15 55804479 55804601 -47690373 - ORR1D2 LTR MaLR -247 123 1 4 1010 368 251 143 15 chr15 55804753 55805125 -47689849 + L1_Mur2 LINE L1 4837 5303 -840 4 1010 205 264 0 128 chr15 55805152 55805356 -47689618 + G-rich Low_complexity Low_complexity 3 180 0 4 1010 1161 70 0 0 chr15 55806170 55806326 -47688648 + (GAAA)n Simple_repeat Simple_repeat 2 157 0 5 1010 189 0 0 0 chr15 55806404 55806425 -47688549 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1010 594 298 96 31 chr15 55806452 55806902 -47688072 + L1_Rod LINE L1 5357 5835 -12 5 1010 333 0 0 0 chr15 55807066 55807103 -47687871 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 1010 234 0 0 0 chr15 55807103 55807128 -47687846 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 1010 261 0 0 0 chr15 55807128 55807156 -47687818 + (GA)n Simple_repeat Simple_repeat 1 29 0 5 1010 21 36 0 0 chr15 55807280 55807308 -47687666 + AT_rich Low_complexity Low_complexity 1 28 0 5 1010 600 179 43 0 chr15 55810655 55810772 -47684202 + B1_Mur4 SINE Alu 23 144 -6 5 1010 180 0 0 0 chr15 55810896 55810916 -47684058 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1010 1175 75 0 0 chr15 55810916 55811062 -47683912 - B1_Mus2 SINE Alu 0 147 2 5 1010 3106 246 81 33 chr15 55811091 55812067 -47682907 - RMER1C Other Other -10 1332 401 5 1010 259 369 9 0 chr15 55812102 55812213 -47682761 - RMER1C Other Other -1202 140 29 5 1010 297 230 0 51 chr15 55812353 55812431 -47682543 - RMER1C Other Other -1050 292 219 5 1010 728 133 0 42 chr15 55812523 55812688 -47682286 + CT-rich Low_complexity Low_complexity 5 162 0 5 1010 485 294 0 67 chr15 55812709 55812844 -47682130 - ID_B1 SINE B4 -18 206 81 5 1010 949 284 39 110 chr15 55813222 55813468 -47681506 + MTEa LTR MaLR 1 243 -136 5 1010 2654 40 65 0 chr15 55813468 55813793 -47681181 - ORR1A1 LTR MaLR 0 346 1 5 1010 949 284 39 110 chr15 55813793 55813954 -47681020 + MTEa LTR MaLR 244 379 0 5 1010 440 283 26 17 chr15 55813954 55814068 -47680906 - ORR1E LTR MaLR -232 127 13 5 1010 636 14 0 0 chr15 55814212 55814285 -47680689 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 1010 270 0 0 0 chr15 55814285 55814314 -47680660 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 1010 249 108 0 0 chr15 55814382 55814419 -47680555 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1010 196 339 43 35 chr15 55814909 55815025 -47679949 + MER5B DNA MER1_type 7 123 -55 5 1010 304 393 110 33 chr15 55815136 55815481 -47679493 + L1MEc LINE L1 32 405 -5995 5 1010 3487 15 5 0 chr15 55815481 55815875 -47679099 - MTA_Mm LTR MaLR 0 396 1 5 1010 304 393 110 33 chr15 55815875 55815892 -47679082 + L1MEc LINE L1 406 422 -5978 5 1010 214 0 0 100 chr15 55816219 55816259 -47678715 + (CAAAA)n Simple_repeat Simple_repeat 4 39 0 5 1010 268 240 111 8 chr15 55816638 55816764 -47678210 + L1MEc LINE L1 1333 1471 -4929 5 1010 1032 236 0 24 chr15 55816877 55817090 -47677884 + B3 SINE B2 1 208 -8 5 1010 267 263 10 29 chr15 55817160 55817262 -47677712 + L1MEc LINE L1 1612 1711 -4704 5 1010 208 304 63 56 chr15 55817442 55817585 -47677389 - MIR SINE MIR -4 264 114 5 1010 1011 77 0 0 chr15 55817702 55817857 -47677117 + (TG)n Simple_repeat Simple_repeat 2 156 0 5 1010 551 333 25 6 chr15 55817863 55818020 -47676954 - B3A SINE B2 -38 160 1 5 1010 4379 112 2 0 chr15 55818146 55818772 -47676202 + Lx2 LINE L1 6371 6997 0 5 1010 405 0 0 0 chr15 55818794 55818839 -47676135 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1010 642 168 7 37 chr15 55818840 55818976 -47675998 + Lx7 LINE L1 6206 6337 -1359 5 1010 1907 280 49 39 chr15 55818968 55819763 -47675211 + Lx7 LINE L1 6880 7682 -14 5 1010 618 168 0 0 chr15 55819867 55819980 -47674994 + GA-rich Low_complexity Low_complexity 1 113 0 5 1010 24 0 0 0 chr15 55820030 55820054 -47674920 + AT_rich Low_complexity Low_complexity 1 24 0 5 1010 2082 52 0 18 chr15 55820732 55821006 -47673968 - L1Md_F2 LINE L1 -10 6572 6304 5 1010 28 0 0 0 chr15 55821067 55821095 -47673879 + AT_rich Low_complexity Low_complexity 1 28 0 5 1010 283 191 0 0 chr15 55821097 55821144 -47673830 - ID4_ SINE ID -34 49 3 5 1010 270 0 0 0 chr15 55821338 55821368 -47673606 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 1010 264 59 0 0 chr15 55821370 55821404 -47673570 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1010 260 309 52 0 chr15 55821465 55821562 -47673412 - L1M5 LINE L1 -648 5592 5491 5 1010 284 293 78 58 chr15 55821724 55821967 -47673007 - L1ME1 LINE L1 -2 6177 5930 5 1010 1232 120 43 33 chr15 55822401 55822695 -47672279 + MTB_Mm-int LTR MaLR 285 508 -750 5 1010 375 301 110 34 chr15 55822753 55823342 -47671632 - L1M5 LINE L1 -1507 4639 4006 5 1010 180 0 0 0 chr15 55823343 55823363 -47671611 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5 1010 653 203 59 0 chr15 55823366 55823484 -47671490 - B1_Mur3 SINE Alu -16 133 9 5 1010 288 0 0 0 chr15 55823534 55823566 -47671408 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 1010 388 307 11 0 chr15 55823591 55823679 -47671295 + B3A SINE B2 4 92 -106 5 1010 6625 15 15 0 chr15 55823785 55824590 -47670384 + L1Md_T LINE L1 4770 5586 -297 5 1010 8485 34 0 0 chr15 55824590 55825586 -47669388 + L1Md_T LINE L1 5587 6582 0 5 1010 279 335 0 77 chr15 55825637 55825805 -47669169 + MIR SINE MIR 97 251 -11 5 1010 943 210 218 114 chr15 55826420 55826930 -47668044 - RMER2 LTR ERV1 -4 563 1 5 1010 354 23 0 0 chr15 55828043 55828086 -47666888 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 1010 614 294 18 6 chr15 55828087 55828251 -47666723 - Lx8 LINE L1 -137 7336 7171 5 1010 2142 97 49 0 chr15 55828281 55828610 -47666364 - BGLII LTR ERVK -76 345 1 5 1010 724 305 33 27 chr15 55828610 55828910 -47666064 - Lx8 LINE L1 -297 7176 6875 5 1010 21 0 0 0 chr15 55828939 55828960 -47666014 + AT_rich Low_complexity Low_complexity 1 21 0 5 1010 364 345 46 75 chr15 55830262 55830575 -47664399 - MLT1A LTR MaLR -8 400 63 5 1010 351 250 40 23 chr15 55832063 55832239 -47662735 + (CATA)n Simple_repeat Simple_repeat 2 180 0 5 1010 360 287 34 11 chr15 55832158 55832334 -47662640 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1010 743 194 29 7 chr15 55832363 55832503 -47662471 - B1_Mur3 SINE Alu -4 145 3 5 1010 189 132 0 0 chr15 55832743 55832781 -47662193 + (T)n Simple_repeat Simple_repeat 1 38 0 5 1010 3038 58 0 5 chr15 55833006 55833373 -47661601 + L1Md_F2 LINE L1 6215 6579 -3 5 1010 1420 161 146 0 chr15 55834143 55834404 -47660570 + RMER1C Other Other 922 1220 -122 5 1010 3312 70 5 46 chr15 55834406 55834843 -47660131 - L1_Mus2 LINE L1 0 6566 6148 5 1010 465 306 118 72 chr15 55835016 55835347 -47659627 - ORR1D1 LTR MaLR -5 369 24 5 1010 232 299 65 0 chr15 55835450 55835527 -47659447 + MLT1J1 LTR MaLR 21 102 -342 5 1011 383 244 87 2 chr15 55836727 55836832 -47658142 - B1F1 SINE Alu -28 121 9 5 1011 418 328 50 33 chr15 55837797 55837977 -47656997 + MER20 DNA MER1_type 14 196 -23 5 1011 252 0 0 0 chr15 55837981 55838009 -47656965 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 5 1011 977 85 124 0 chr15 55838009 55838138 -47656836 + B1_Mus2 SINE Alu 1 145 -2 5 1011 545 243 14 0 chr15 55838406 55838550 -47656424 - Lx9 LINE L1 -21 7623 7478 5 1011 625 266 53 5 chr15 55838578 55838767 -47656207 - L1MA4 LINE L1 -365 5935 5738 5 1011 316 312 82 20 chr15 55838820 55838967 -47656007 - MLT1F-int LTR MaLR -619 870 715 5 1011 327 244 0 0 chr15 55840082 55840160 -47654814 - L1MA4 LINE L1 -418 5882 5805 5 1011 261 0 0 0 chr15 55840222 55840251 -47654723 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1011 773 218 28 34 chr15 55840265 55840441 -47654533 + MTE2b LTR MaLR 205 379 0 5 1011 342 333 87 44 chr15 55840441 55840669 -47654305 + MLT1A LTR MaLR 137 374 0 5 1011 3893 200 16 82 chr15 55840766 55841134 -47653840 - Lx7 LINE L1 0 7696 7360 5 1011 270 0 0 0 chr15 55841134 55841164 -47653810 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 1011 3893 200 16 82 chr15 55841164 55841734 -47653240 - Lx7 LINE L1 -337 7359 6820 5 1011 661 321 134 0 chr15 55841845 55842091 -47652883 + B4A SINE B4 4 282 -10 5 1011 617 266 12 17 chr15 55842371 55842543 -47652431 - Lx7 LINE L1 -464 7232 7062 5 1011 612 229 54 64 chr15 55842542 55842910 -47652064 + Lx7 LINE L1 7231 7673 -23 5 1011 396 0 0 0 chr15 55844059 55844103 -47650871 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1011 822 204 0 27 chr15 55844502 55844638 -47650336 + B1_Mur2 SINE Alu 1 136 -13 5 1011 366 23 0 0 chr15 55844638 55844681 -47650293 + (CAAAA)n Simple_repeat Simple_repeat 1 43 0 5 1011 183 80 0 0 chr15 55846151 55846176 -47648798 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 5 1011 990 286 78 34 chr15 55846464 55846867 -47648107 + MLT1C LTR MaLR 3 452 -53 5 1011 237 321 26 35 chr15 55847063 55847176 -47647798 + PB1D9 SINE Alu 2 113 -7 5 1011 254 329 27 0 chr15 55847205 55847278 -47647696 + ID4 SINE ID 4 78 -5 5 1011 299 324 0 0 chr15 55848370 55848438 -47646536 + RSINE1 SINE B4 54 121 -44 5 1011 333 0 0 0 chr15 55848448 55848485 -47646489 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1011 387 0 0 0 chr15 55848485 55848527 -47646447 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 1011 1405 190 0 0 chr15 55850129 55850350 -47644624 + URR1B DNA MER1_type 2 222 -3 5 1011 248 328 0 0 chr15 55851284 55851351 -47643623 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 1011 276 359 85 35 chr15 55851387 55851586 -47643388 + LTR79 LTR ERVL 186 394 -133 5 1011 306 132 0 0 chr15 55851875 55851928 -47643046 + (TCC)n Simple_repeat Simple_repeat 2 54 0 5 1011 267 299 72 47 chr15 55852105 55852250 -47642724 - MIR3 SINE MIR -110 158 5 5 1011 22 0 0 0 chr15 55852466 55852488 -47642486 + AT_rich Low_complexity Low_complexity 1 22 0 5 1011 24 0 0 0 chr15 55853088 55853112 -47641862 + AT_rich Low_complexity Low_complexity 1 24 0 5 1011 322 113 93 0 chr15 55853175 55853326 -47641648 + (TA)n Simple_repeat Simple_repeat 2 166 0 5 1011 2431 146 17 29 chr15 55853367 55853777 -47641197 - L1_Mus4 LINE L1 0 6636 6232 5 1011 1504 80 11 0 chr15 55854289 55854477 -47640497 + B2_Mm1t SINE B2 1 190 -3 5 1011 1803 100 4 4 chr15 55854751 55855012 -47639962 + Lx LINE L1 6373 6633 -21 5 1011 296 161 16 0 chr15 55855604 55855666 -47639308 + CT-rich Low_complexity Low_complexity 3 65 0 5 1011 1177 236 92 17 chr15 55856436 55856793 -47638181 + RMER17C LTR ERVK 1 384 -26 5 1011 591 201 0 0 chr15 55857248 55857427 -47637547 + GA-rich Low_complexity Low_complexity 1 179 0 6 1011 407 302 122 9 chr15 55857748 55857962 -47637012 + L3 LINE CR1 4021 4258 -231 6 1011 254 143 20 0 chr15 55858216 55858265 -47636709 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1011 496 194 12 37 chr15 55858278 55858439 -47636535 + (TATG)n Simple_repeat Simple_repeat 4 160 0 6 1011 633 90 0 0 chr15 55858721 55858810 -47636164 + (TTTCC)n Simple_repeat Simple_repeat 3 91 0 6 1011 441 0 0 0 chr15 55861036 55861085 -47633889 + (GA)n Simple_repeat Simple_repeat 2 50 0 6 1011 252 0 0 0 chr15 55861170 55861198 -47633776 + (CAGA)n Simple_repeat Simple_repeat 2 29 0 6 1011 226 375 85 15 chr15 55861434 55861564 -47633410 + MIRb SINE MIR 12 150 -118 6 1011 275 358 96 33 chr15 55861832 55862080 -47632894 - LTR33A_ LTR ERVL -232 299 32 6 1011 627 189 200 13 chr15 55862211 55862366 -47632608 - B2_Mm2 SINE B2 -10 185 2 6 1011 278 363 77 38 chr15 55862883 55863092 -47631882 + MLT1C LTR MaLR 31 247 -258 6 1011 288 348 101 19 chr15 55863113 55863271 -47631703 + MLT1C LTR MaLR 292 462 -5 6 1011 620 296 36 46 chr15 55863724 55863919 -47631055 + MLT1F1 LTR MaLR 110 302 -267 6 1011 4620 12 0 0 chr15 55864115 55864597 -47630377 - LTRIS_Mm LTR ERV1 0 482 1 6 1011 36570 29 14 11 chr15 55864597 55869121 -47625853 - MuRRS-int LTR ERV1 0 4690 1 6 1011 4599 14 0 0 chr15 55869121 55869603 -47625371 - LTRIS_Mm LTR ERV1 0 482 1 6 1011 249 314 0 0 chr15 55869906 55869957 -47625017 + MLT1F1 LTR MaLR 390 440 -120 6 1011 26 0 0 0 chr15 55870031 55870057 -47624917 + AT_rich Low_complexity Low_complexity 1 26 0 6 1011 324 331 80 29 chr15 55870319 55870456 -47624518 - MLT1G1 LTR MaLR -23 556 413 6 1011 465 34 0 0 chr15 55870607 55870666 -47624308 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 6 1011 712 361 89 28 chr15 55870809 55871268 -47623706 + MLT1G1 LTR MaLR 81 567 -12 6 1011 4195 191 40 19 chr15 55871419 55872216 -47622758 + Lx5 LINE L1 6237 7050 0 6 1011 249 159 0 0 chr15 55872303 55872347 -47622627 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 1011 300 383 96 38 chr15 55872654 55873072 -47621902 - L2c LINE L2 -187 3239 2806 6 1011 181 225 25 0 chr15 55873146 55873186 -47621788 - L2c LINE L2 -705 2714 2674 6 1011 255 175 31 31 chr15 55874544 55874609 -47620365 + Lx8 LINE L1 7407 7471 -2 6 1011 338 330 116 41 chr15 55875392 55875711 -47619263 + L1MC5 LINE L1 5733 6075 -1807 6 1011 252 0 0 0 chr15 55875732 55875760 -47619214 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1011 517 289 16 0 chr15 55875776 55875897 -47619077 - B3A SINE B2 -74 124 2 6 1011 386 288 216 38 chr15 55876487 55876931 -47618043 + L1MC5 LINE L1 6707 7229 -732 6 1011 298 155 42 14 chr15 55878174 55878246 -47616728 + GA-rich Low_complexity Low_complexity 3 76 0 6 1011 320 104 28 79 chr15 55882170 55882347 -47612627 + (CAAA)n Simple_repeat Simple_repeat 2 169 0 6 1011 870 189 0 0 chr15 55882994 55883169 -47611805 + CT-rich Low_complexity Low_complexity 2 176 0 6 1011 1455 152 38 0 chr15 55883244 55883455 -47611519 - URR1B DNA MER1_type -2 223 5 6 1011 444 284 19 51 chr15 55883593 55883749 -47611225 - RMER15 LTR ERVL -3 572 422 6 1011 458 291 36 29 chr15 55884405 55884543 -47610431 - ID_B1 SINE B4 -2 222 84 6 1011 739 237 34 91 chr15 55884665 55884874 -47610100 - B3A SINE B2 0 198 2 6 1011 1169 67 0 11 chr15 55885407 55885589 -47609385 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 1011 591 85 0 0 chr15 55885626 55885708 -47609266 + (TAGA)n Simple_repeat Simple_repeat 2 83 0 6 1011 223 28 56 0 chr15 55885907 55885943 -47609031 + (CAAAA)n Simple_repeat Simple_repeat 4 41 0 6 1011 1381 245 75 83 chr15 55886138 55886695 -47608279 + RLTR31_Mur LTR ERVK 1 553 0 6 1011 297 0 0 0 chr15 55886816 55886849 -47608125 + (TA)n Simple_repeat Simple_repeat 2 34 0 6 1011 1500 249 50 21 chr15 55887215 55887597 -47607377 + MTD LTR MaLR 4 396 -23 6 1011 228 269 19 0 chr15 55889112 55889164 -47605810 - ORR1E LTR MaLR -262 97 45 6 1011 2303 100 9 0 chr15 55889996 55890316 -47604658 - ORR1A2 LTR MaLR 0 327 5 6 1011 424 273 101 16 chr15 55890329 55890624 -47604350 - MTE2b LTR MaLR -7 372 8 6 1011 275 238 16 0 chr15 55890624 55890687 -47604287 + MER117 DNA MER1_type 51 114 -83 6 1011 397 241 15 8 chr15 55891177 55891311 -47603663 - Lx9 LINE L1 0 7644 7510 6 1011 4474 122 81 16 chr15 55891342 55892106 -47602868 + Lx3C LINE L1 6155 6968 -8 6 1011 320 273 0 0 chr15 55892131 55892197 -47602777 - B4A SINE B4 -82 210 145 6 1011 180 0 0 0 chr15 55892411 55892431 -47602543 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 1011 2498 196 133 2 chr15 55892921 55893469 -47601505 + Lx6 LINE L1 6837 7456 -4 6 1011 4691 49 2 28 chr15 55893627 55894231 -47600743 - L1Md_F2 LINE L1 -13 6569 5982 6 1011 297 362 65 37 chr15 55894373 55894588 -47600386 + MIR SINE MIR 21 241 -21 6 1011 1997 63 0 0 chr15 55894769 55895039 -47599935 - L1_Mus3 LINE L1 -260 6378 6109 6 1011 1677 82 27 15 chr15 55895039 55895290 -47599684 + L1_Mus3 LINE L1 6375 6631 -7 6 1011 210 37 0 0 chr15 55895290 55895317 -47599657 + (CTAA)n Simple_repeat Simple_repeat 2 28 0 6 1011 479 286 68 0 chr15 55895645 55895778 -47599196 + B1F SINE Alu 3 144 -5 6 1011 357 325 76 48 chr15 55896792 55897082 -47597892 + L2b LINE L2 3120 3426 0 6 1011 258 32 0 0 chr15 55897082 55897113 -47597861 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 6 1011 252 143 14 28 chr15 55897257 55897329 -47597645 + (TATG)n Simple_repeat Simple_repeat 2 72 0 6 1011 559 48 12 12 chr15 55897337 55897421 -47597553 + (TCTA)n Simple_repeat Simple_repeat 2 85 0 6 1011 1624 195 19 6 chr15 55897438 55897758 -47597216 - Lx5 LINE L1 -3 7047 6724 6 1011 216 0 0 0 chr15 55897940 55897964 -47597010 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1011 513 0 0 0 chr15 55898013 55898070 -47596904 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1011 373 347 82 38 chr15 55898891 55899183 -47595791 - MTEa LTR MaLR -35 344 4 6 1011 459 0 0 0 chr15 55900203 55900254 -47594720 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1011 298 310 139 10 chr15 55900256 55900357 -47594617 - RSINE1 SINE B4 -47 118 5 6 1011 1448 236 86 13 chr15 55900405 55900779 -47594195 - MTD LTR MaLR -14 405 5 6 1011 338 0 24 0 chr15 55901522 55901564 -47593410 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 6 1011 1086 259 161 6 chr15 55903795 55903953 -47591021 + RCHARR1 DNA MER1_type 35 210 -764 6 1011 311 0 26 0 chr15 55903953 55903992 -47590982 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1011 1086 259 161 6 chr15 55903992 55904175 -47590799 + RCHARR1 DNA MER1_type 211 428 -546 6 1011 1717 228 144 43 chr15 55904184 55904902 -47590072 - RMER6C LTR ERVK 0 720 81 6 1011 23 0 0 0 chr15 55904962 55904985 -47589989 + AT_rich Low_complexity Low_complexity 1 23 0 6 1011 4947 55 0 2 chr15 55905071 55905687 -47589287 - L1Md_F2 LINE L1 -2 6580 5966 6 1011 310 149 0 0 chr15 55905687 55905734 -47589240 - RMER6C LTR ERVK -673 47 1 6 1011 1259 233 162 0 chr15 55905734 55906143 -47588831 + RCHARR1 DNA MER1_type 426 902 -72 6 1011 1554 73 5 9 chr15 55906392 55906614 -47588360 - L1_Mus2 LINE L1 -72 6494 6274 6 1011 435 38 0 0 chr15 55908090 55908143 -47586831 + (TATG)n Simple_repeat Simple_repeat 3 55 0 6 1011 300 336 18 0 chr15 55908344 55908454 -47586520 - MLT1N2 LTR MaLR -17 545 434 6 1011 261 0 0 0 chr15 55908460 55908489 -47586485 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1011 497 188 0 7 chr15 55909185 55909340 -47585634 + CT-rich Low_complexity Low_complexity 1 154 0 6 1011 324 0 0 0 chr15 55909340 55909376 -47585598 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1011 198 150 0 0 chr15 55910648 55910688 -47584286 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 1011 967 296 97 9 chr15 55910941 55911516 -47583458 - L1MB7 LINE L1 -13 6171 5546 6 1011 189 368 47 9 chr15 55911668 55911775 -47583199 - MIRm SINE MIR -125 151 41 6 1011 180 227 0 64 chr15 55911810 55911857 -47583117 + L4 LINE RTE 1742 1785 -244 6 1011 253 346 9 28 chr15 55912123 55912230 -47582744 - MIRb SINE MIR -79 189 85 6 1011 198 0 0 0 chr15 55912701 55912723 -47582251 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1011 329 255 147 7 chr15 55912744 55912894 -47582080 + MTEa LTR MaLR 19 189 -190 6 1011 1239 218 108 71 chr15 55912900 55913418 -47581556 - MT2B LTR ERVL -3 598 1 6 1011 584 269 80 0 chr15 55913419 55913594 -47581380 + MTEa LTR MaLR 191 379 0 6 1011 26 0 0 0 chr15 55914377 55914403 -47580571 + AT_rich Low_complexity Low_complexity 1 26 0 6 1011 511 248 19 0 chr15 55915264 55915369 -47579605 - PB1D10 SINE Alu -10 107 1 6 1011 1303 6 0 0 chr15 55915979 55916136 -47578838 - L1Md_A LINE L1 -453 5430 5274 6 1011 675 13 0 0 chr15 55916133 55916211 -47578763 + L1Md_A LINE L1 5509 5586 -297 6 1011 8774 15 1 0 chr15 55916211 55917206 -47577768 + L1Md_A LINE L1 5587 6582 0 6 1011 2243 176 39 5 chr15 55917477 55917883 -47577091 + MTC LTR MaLR 1 420 -1 6 1011 33 25 0 0 chr15 55918027 55918067 -47576907 + AT_rich Low_complexity Low_complexity 1 40 0 6 1011 219 146 0 0 chr15 55918122 55918163 -47576811 + (CATA)n Simple_repeat Simple_repeat 2 42 0 6 1011 939 46 130 8 chr15 55918204 55918335 -47576639 - B1_Mus2 SINE Alu 0 147 1 6 1011 190 309 18 0 chr15 55918476 55918531 -47576443 - MIR SINE MIR -175 87 32 6 1011 240 316 13 0 chr15 55919166 55919245 -47575729 + MIR SINE MIR 39 118 -144 6 1011 228 325 78 0 chr15 55919283 55919360 -47575614 + MER5B DNA MER1_type 10 92 -86 6 1011 23 0 0 0 chr15 55919408 55919431 -47575543 + AT_rich Low_complexity Low_complexity 1 23 0 6 1011 2883 202 19 5 chr15 55919433 55920021 -47574953 + Lx7 LINE L1 6701 7296 -400 6 1011 342 297 62 99 chr15 55920021 55920039 -47574935 + B4 SINE B4 69 80 -212 6 1011 756 201 28 7 chr15 55920039 55920184 -47574790 + B1_Mur4 SINE Alu 3 150 0 6 1011 206 191 0 81 chr15 55920184 55920258 -47574716 + A-rich Low_complexity Low_complexity 1 68 0 6 1011 200 211 19 19 chr15 55920327 55920380 -47574594 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1011 189 0 0 0 chr15 55920402 55920423 -47574551 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1011 552 30 0 0 chr15 55920461 55920527 -47574447 + (GA)n Simple_repeat Simple_repeat 1 66 0 6 1011 243 198 22 44 chr15 55920546 55920636 -47574338 + Lx6 LINE L1 7360 7447 -13 6 1011 351 329 89 0 chr15 55921011 55921157 -47573817 - MLT1A LTR MaLR -215 159 1 7 1011 1209 125 22 0 chr15 55921235 55921419 -47573555 + B2_Mm2 SINE B2 2 189 -6 7 1011 308 330 37 37 chr15 55922254 55922361 -47572613 + MLT1I LTR MaLR 133 239 -172 7 1011 741 238 52 43 chr15 55923101 55923324 -47571650 - RMER17C LTR ERVK 0 410 186 7 1011 8089 39 0 0 chr15 55923324 55924281 -47570693 + L1Md_T LINE L1 5626 6582 0 7 1011 978 309 26 26 chr15 55924293 55924709 -47570265 - Lx8 LINE L1 -909 6787 6348 7 1011 831 19 0 0 chr15 55925238 55925344 -47569630 - L1Md_T LINE L1 -1500 4383 4278 7 1011 9796 22 0 1 chr15 55925336 55926532 -47568442 + L1Md_T LINE L1 4392 5586 -297 7 1011 8388 35 2 0 chr15 55926532 55927523 -47567451 + L1Md_T LINE L1 5587 6579 -3 7 1011 644 292 49 95 chr15 55928013 55928268 -47566706 + MTE2a LTR MaLR 10 264 -115 7 1011 1990 144 16 65 chr15 55928268 55928654 -47566320 + ORR1B2 LTR MaLR 1 367 0 7 1011 644 256 36 104 chr15 55928654 55928778 -47566196 + MTE2a LTR MaLR 265 379 0 7 1011 28 0 0 0 chr15 55929418 55929446 -47565528 + AT_rich Low_complexity Low_complexity 1 28 0 7 1011 220 356 116 21 chr15 55929550 55929703 -47565271 - MIRb SINE MIR -47 221 51 7 1011 198 360 105 0 chr15 55929790 55929904 -47565070 + MIR SINE MIR 19 144 -118 7 1011 22 35 0 0 chr15 55929934 55929963 -47565011 + AT_rich Low_complexity Low_complexity 1 29 0 7 1011 591 276 148 70 chr15 55929964 55929975 -47564999 - B4 SINE B4 -13 279 270 7 1011 454 43 14 14 chr15 55929975 55930045 -47564929 + (TA)n Simple_repeat Simple_repeat 2 71 0 7 1011 315 0 0 0 chr15 55930045 55930080 -47564894 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1011 591 276 148 70 chr15 55930080 55930144 -47564830 - B4 SINE B4 -23 269 207 7 1011 4526 178 26 32 chr15 55930144 55931053 -47563921 - RMER13B LTR ERVK 0 908 5 7 1011 591 276 148 70 chr15 55931053 55931232 -47563742 - B4 SINE B4 -86 206 4 7 1011 266 374 111 75 chr15 55931501 55932033 -47562941 + MLT1K LTR MaLR 45 595 0 7 1011 273 365 79 13 chr15 55932747 55932994 -47561980 + MIRb SINE MIR 1 262 -6 7 1011 1097 202 35 50 chr15 55933488 55933787 -47561187 + Lx5 LINE L1 6267 6543 -515 7 1011 4889 92 99 7 chr15 55933787 55934497 -47560477 - L1_Mus4 LINE L1 -7 6629 5855 7 1011 1595 228 26 34 chr15 55934497 55935041 -47559933 + Lx5 LINE L1 6440 7057 -1 7 1011 610 328 81 56 chr15 55935594 55935917 -47559057 + MER2 DNA MER2_type 14 344 -1 7 1011 1050 125 0 0 chr15 55936324 55936500 -47558474 + (GA)n Simple_repeat Simple_repeat 1 176 0 7 1011 474 18 0 0 chr15 55936663 55936718 -47558256 + (TC)n Simple_repeat Simple_repeat 2 56 0 7 1011 617 167 0 8 chr15 55937331 55937458 -47557516 + (TA)n Simple_repeat Simple_repeat 2 127 0 7 1011 198 0 0 0 chr15 55937816 55937838 -47557136 + (TG)n Simple_repeat Simple_repeat 2 23 0 7 1011 23 33 0 0 chr15 55937968 55937998 -47556976 + AT_rich Low_complexity Low_complexity 1 30 0 7 1011 246 204 18 9 chr15 55938146 55938255 -47556719 + (TA)n Simple_repeat Simple_repeat 2 111 0 7 1011 229 204 23 0 chr15 55938256 55938300 -47556674 + GA-rich Low_complexity Low_complexity 6 50 0 7 1011 746 327 149 32 chr15 55938301 55938671 -47556303 - MLT2B2 LTR ERVL -54 466 54 7 1011 692 87 0 0 chr15 55939050 55939165 -47555809 - L1_Mus4 LINE L1 -2 6634 6520 7 1011 198 0 0 0 chr15 55939684 55939706 -47555268 + (TC)n Simple_repeat Simple_repeat 2 23 0 7 1011 40 73 0 0 chr15 55941787 55941869 -47553105 + AT_rich Low_complexity Low_complexity 1 82 0 7 1011 372 125 0 0 chr15 55942002 55942066 -47552908 + (TG)n Simple_repeat Simple_repeat 1 64 0 7 1011 3397 133 20 12 chr15 55942137 55942730 -47552244 - Lx2B LINE L1 -805 6195 5598 7 1011 457 286 31 8 chr15 55944006 55944133 -47550841 - RSINE1 SINE B4 -33 132 3 7 1011 776 300 91 14 chr15 55944588 55945004 -47549970 + Charlie2a DNA MER1_type 1663 2110 -751 7 1011 462 274 0 0 chr15 55945004 55945172 -47549802 + (CA)n Simple_repeat Simple_repeat 2 169 0 7 1011 297 221 0 13 chr15 55945495 55945573 -47549401 + (TG)n Simple_repeat Simple_repeat 2 78 0 7 1011 932 232 39 7 chr15 55945587 55945873 -47549101 - L1_Mur3 LINE L1 -6403 1309 1015 7 1011 3169 197 27 3 chr15 55945888 55946515 -47548459 + Lx7 LINE L1 6618 7259 -437 7 1011 27 0 0 0 chr15 55947071 55947098 -47547876 + AT_rich Low_complexity Low_complexity 1 27 0 7 1011 522 244 59 8 chr15 55947109 55947285 -47547689 - B3A SINE B2 -1 194 5 7 1011 885 216 34 54 chr15 55947400 55947694 -47547280 + Lx7 LINE L1 7253 7540 -156 7 1011 760 326 103 9 chr15 55947964 55948400 -47546574 + Arthur1 DNA Tip100 3462 3938 -9 7 1011 1109 243 62 61 chr15 55948466 55948828 -47546146 - ORR1D2 LTR MaLR 0 379 19 7 1011 393 90 35 103 chr15 55948846 55948861 -47546113 - B2_Mm2 SINE B2 0 195 184 7 1011 1366 79 16 26 chr15 55948861 55949055 -47545919 - B2_Mm2 SINE B2 -3 192 1 7 1011 393 90 35 103 chr15 55949055 55949126 -47545848 - B2_Mm2 SINE B2 -12 183 115 7 1011 970 143 12 6 chr15 55949126 55949288 -47545686 + RMER17C LTR ERVK 248 410 0 7 1011 402 74 0 0 chr15 55950139 55950193 -47544781 + (TCCC)n Simple_repeat Simple_repeat 4 57 0 7 1011 1304 138 40 44 chr15 55951592 55951842 -47543132 - L1_Mus3 LINE L1 -16 6622 6374 7 1011 39540 30 0 6 chr15 55951874 55958058 -47536916 - L1Md_A LINE L1 0 6582 440 7 1011 1542 98 48 16 chr15 55958039 55958287 -47536687 - L1_Mus4 LINE L1 -232 6404 6149 7 1011 183 42 0 0 chr15 55958567 55958591 -47536383 + (TTG)n Simple_repeat Simple_repeat 2 25 0 7 1011 223 277 185 0 chr15 55960224 55960343 -47534631 + L4 LINE RTE 1706 1846 -183 7 1011 7670 63 4 12 chr15 55961353 55962928 -47532046 - L1Md_F2 LINE L1 0 6582 5022 7 1011 970 83 30 0 chr15 55963098 55963231 -47531743 + B1_Mus2 SINE Alu 2 138 -9 7 1011 612 40 0 0 chr15 55963875 55963950 -47531024 + (CA)n Simple_repeat Simple_repeat 2 76 0 7 1011 327 25 0 0 chr15 55963950 55963989 -47530985 + (GA)n Simple_repeat Simple_repeat 2 41 0 7 126 20734 79 8 3 chr15 55964593 55968045 -47526929 - L1Md_F2 LINE L1 0 6582 3110 7 1012 268 143 48 0 chr15 55968044 55968086 -47526888 + Lx6 LINE L1 7035 7078 -382 7 1012 394 292 41 7 chr15 55968786 55968931 -47526043 - Lx6 LINE L1 -23 7437 7288 7 1012 911 285 68 28 chr15 55968938 55969259 -47525715 - Lx5 LINE L1 -211 6839 6506 7 1012 2737 211 63 6 chr15 55969322 55970226 -47524748 - Lx6 LINE L1 -686 6372 5341 7 1012 3209 94 2 13 chr15 55970307 55970768 -47524206 - L1_Mus2 LINE L1 0 6566 6111 7 1012 662 91 0 10 chr15 55971653 55971753 -47523221 + (TA)n Simple_repeat Simple_repeat 2 100 0 7 1012 306 346 13 0 chr15 55972209 55972287 -47522687 + ID4 SINE ID 3 81 -2 7 1012 22 56 0 0 chr15 55972666 55972702 -47522272 + AT_rich Low_complexity Low_complexity 1 36 0 7 1012 712 338 14 14 chr15 55972742 55972958 -47522016 - ID_B1 SINE B4 -6 218 3 7 1012 515 308 34 108 chr15 55973151 55973420 -47521554 - MTEa LTR MaLR -106 273 25 7 1012 701 296 76 31 chr15 55973428 55973738 -47521236 - MTEa-int LTR MaLR -3 1577 1254 7 1012 236 30 30 0 chr15 55973738 55973771 -47521203 + (CAA)n Simple_repeat Simple_repeat 2 35 0 7 1012 290 353 40 7 chr15 55974945 55975096 -47519878 - HAL1 LINE L1 -2337 170 15 7 1012 1770 188 79 3 chr15 55975773 55976114 -47518860 - ORR1B1 LTR MaLR -27 367 1 7 1012 24 0 0 0 chr15 55976723 55976747 -47518227 + AT_rich Low_complexity Low_complexity 1 24 0 7 1012 308 295 71 14 chr15 55976931 55977072 -47517902 + MIR SINE MIR 78 226 -36 7 1012 377 340 41 77 chr15 55977086 55977369 -47517605 + B4A SINE B4 11 292 0 7 1012 36364 30 4 8 chr15 55977369 55982485 -47512489 + L1Md_T LINE L1 502 5586 -297 7 1012 8301 36 2 0 chr15 55982486 55983478 -47511496 + L1Md_T LINE L1 5588 6581 -1 7 1012 292 316 0 0 chr15 55983483 55983562 -47511412 + B3A SINE B2 6 84 -114 7 1012 2271 183 14 5 chr15 55983620 55984037 -47510937 - MTC LTR MaLR 0 421 1 7 1012 4145 69 0 0 chr15 55984095 55984614 -47510360 + L1_Mus1 LINE L1 6047 6565 -2 7 1012 14329 202 27 24 chr15 55984944 55985514 -47509460 + L1VL4 LINE L1 709 1296 -4590 7 1012 2116 76 31 3 chr15 55985514 55985806 -47509168 + L1_Mus3 LINE L1 6333 6632 -6 7 1012 14329 166 57 17 chr15 55985806 55986470 -47508504 + L1VL4 LINE L1 1297 2028 -3858 7 1012 363 23 0 0 chr15 55986470 55986514 -47508460 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 7 1012 14329 166 57 17 chr15 55986514 55988693 -47506281 + L1VL4 LINE L1 2029 4251 -1635 7 1012 988 172 23 6 chr15 55988673 55988848 -47506126 + Lx3C LINE L1 6284 6461 -515 7 1012 448 344 56 6 chr15 55989244 55989405 -47505569 + MLT1E3 LTR MaLR 377 545 -79 7 1012 218 111 67 0 chr15 55991064 55991109 -47503865 + (TATATG)n Simple_repeat Simple_repeat 2 49 0 7 1012 516 105 0 0 chr15 55991459 55991535 -47503439 + (TG)n Simple_repeat Simple_repeat 1 76 0 7 1012 489 226 6 11 chr15 55991547 55991726 -47503248 + (TA)n Simple_repeat Simple_repeat 2 179 0 7 1012 23 54 0 0 chr15 55991913 55991950 -47503024 + AT_rich Low_complexity Low_complexity 1 37 0 7 1012 24 0 0 0 chr15 55992497 55992521 -47502453 + AT_rich Low_complexity Low_complexity 1 24 0 7 1012 232 306 24 0 chr15 55992645 55992730 -47502244 + CT-rich Low_complexity Low_complexity 1 87 0 7 1012 517 345 34 6 chr15 55992805 55992980 -47501994 + B3A SINE B2 14 193 -5 7 1012 1835 218 22 19 chr15 55994058 55994469 -47500505 + MTD LTR MaLR 3 414 -5 7 1012 381 234 258 31 chr15 55995183 55995342 -47499632 - MT2A LTR ERVL -12 521 327 7 1012 257 330 128 0 chr15 55995623 55995717 -47499257 + PB1D10 SINE Alu 1 106 -11 7 1012 630 39 0 0 chr15 55995739 55995816 -47499158 + (GA)n Simple_repeat Simple_repeat 2 78 0 7 1012 436 366 63 42 chr15 55996022 55996356 -47498618 - LTR16E2 LTR ERVL -21 547 207 7 1012 279 246 0 15 chr15 55996559 55996625 -47498349 + MIR SINE MIR 166 230 -32 7 1012 305 389 64 43 chr15 55996827 55997109 -47497865 - MLT1A0 LTR MaLR -66 299 12 7 1012 523 258 49 29 chr15 55998355 55998559 -47496415 - MER58D DNA MER1_type -105 281 74 7 1012 702 309 38 2 chr15 55998564 55998767 -47496207 - B3A SINE B2 -5 211 1 7 1012 230 402 12 12 chr15 55998770 55998853 -47496121 - MER58D DNA MER1_type -304 82 1 7 1012 236 279 147 0 chr15 55999082 55999150 -47495824 + B3A SINE B2 78 155 -43 7 1012 243 0 0 0 chr15 55999163 55999190 -47495784 + (TC)n Simple_repeat Simple_repeat 2 28 0 8 1012 413 359 132 36 chr15 55999275 55999555 -47495419 + MER21B LTR ERV1 404 710 -153 8 1012 32 43 0 0 chr15 56002898 56002944 -47492030 + AT_rich Low_complexity Low_complexity 1 46 0 1 1012 235 324 19 9 chr15 56004400 56004506 -47490468 + CT-rich Low_complexity Low_complexity 1 107 0 2 1012 251 275 90 22 chr15 56004506 56004640 -47490334 - B1F1 SINE Alu -6 143 1 3 1012 277 343 10 19 chr15 56004700 56004804 -47490170 + PB1 SINE Alu 4 106 -21 4 1012 730 229 14 7 chr15 56005138 56005279 -47489695 - B1_Mur1 SINE Alu -1 148 7 5 1012 2503 247 80 20 chr15 56005563 56006248 -47488726 - Lx6 LINE L1 -176 7284 6559 6 1012 4713 139 13 13 chr15 56006250 56007357 -47487617 + Lx3C LINE L1 5358 6461 -515 7 1012 2068 123 41 41 chr15 56007357 56007722 -47487252 + IAPLTR1_Mm LTR ERVK 1 365 -2 8 1012 53969 19 7 10 chr15 56007722 56014216 -47480758 + IAPEz-int LTR ERVK 6 6481 0 8 1012 2068 123 41 41 chr15 56014216 56014581 -47480393 + IAPLTR1_Mm LTR ERVK 1 365 -2 8 1012 2277 182 74 0 chr15 56014596 56015080 -47479894 + Lx3C LINE L1 6455 6974 -2 7 1012 594 228 0 74 chr15 56015094 56015269 -47479705 - Lx6 LINE L1 -908 6552 6391 6 1012 558 242 22 59 chr15 56015398 56015534 -47479440 + ID_B1 SINE B4 87 217 -7 9 1012 222 214 0 0 chr15 56015535 56015591 -47479383 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 1 1012 180 286 17 35 chr15 56016589 56016647 -47478327 - L4 LINE RTE -1333 696 640 1 1012 22 35 0 0 chr15 56017538 56017567 -47477407 + AT_rich Low_complexity Low_complexity 1 29 0 1 1012 555 16 0 0 chr15 56018079 56018143 -47476831 + (GA)n Simple_repeat Simple_repeat 1 64 0 1 1012 3319 184 52 9 chr15 56018233 56018874 -47476100 + Lx5 LINE L1 6382 7049 -1 1 1012 338 307 111 62 chr15 56019196 56019222 -47475752 + CYRA11_Mm Unknown Y-chromosome 138 212 -405 1 1012 960 158 109 38 chr15 56019222 56019270 -47475704 - URR1A DNA MER1_type 0 226 182 1 1012 1764 189 88 16 chr15 56019270 56019440 -47475534 - MTB_Mm LTR MaLR -3 404 225 1 1012 180 77 0 0 chr15 56019440 56019466 -47475508 + (CTTG)n Simple_repeat Simple_repeat 1 26 0 1 1012 1764 189 88 16 chr15 56019466 56019671 -47475303 - MTB_Mm LTR MaLR -183 224 3 1 1012 960 158 109 38 chr15 56019671 56019833 -47475141 - URR1A DNA MER1_type -45 181 1 1 1012 195 100 0 0 chr15 56020891 56020921 -47474053 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1012 1093 141 11 26 chr15 56021155 56021345 -47473629 + URR1B DNA MER1_type 39 225 0 2 1012 427 284 58 39 chr15 56021442 56021596 -47473378 + MTD LTR MaLR 10 166 -253 2 1012 775 305 88 56 chr15 56021530 56021740 -47473234 + MT2A LTR ERVL 72 291 -242 2 1012 1140 81 0 0 chr15 56021740 56021888 -47473086 - B1_Mus1 SINE Alu 0 148 1 2 1012 775 305 88 56 chr15 56021888 56022052 -47472922 + MT2A LTR ERVL 292 458 -75 2 1012 2246 128 48 0 chr15 56022321 56022658 -47472316 - Lx3_Mus LINE L1 -15 6994 6642 2 1012 2683 64 30 66 chr15 56022658 56022958 -47472016 - Lx3_Mus LINE L1 -1026 5983 5783 2 1012 1156 58 0 0 chr15 56022958 56023095 -47471879 - B1_Mus2 SINE Alu -10 137 1 2 1012 2683 87 39 191 chr15 56023095 56023512 -47471462 - Lx3_Mus LINE L1 -89 5797 5359 2 1012 7322 67 4 4 chr15 56023510 56025075 -47469899 - L1Md_F2 LINE L1 0 6582 5015 2 1012 4872 191 47 41 chr15 56026043 56027236 -47467738 - Lx4B LINE L1 -49 7009 5810 2 1012 263 403 35 7 chr15 56027402 56027547 -47467427 + MTEb LTR MaLR 1 149 -230 2 1012 453 374 25 10 chr15 56027651 56027848 -47467126 + MT2A LTR ERVL 231 430 -103 3 1012 453 19 0 0 chr15 56027887 56027941 -47467033 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1012 255 291 43 48 chr15 56028995 56029128 -47465846 + MER5A DNA MER1_type 9 142 -47 3 1012 796 178 67 67 chr15 56029152 56029345 -47465629 + B3A SINE B2 4 196 -2 3 1012 245 347 43 61 chr15 56029371 56029650 -47465324 - L2c LINE L2 -171 3216 2943 3 1012 229 368 30 24 chr15 56029802 56029969 -47465005 + L3 LINE CR1 3580 3747 -742 3 1012 369 0 0 0 chr15 56029993 56030034 -47464940 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1012 712 297 65 0 chr15 56030100 56030285 -47464689 + B3 SINE B2 1 197 -19 3 1012 21 57 0 0 chr15 56030301 56030336 -47464638 + AT_rich Low_complexity Low_complexity 1 35 0 3 1012 483 73 0 0 chr15 56030723 56030791 -47464183 + (TGGA)n Simple_repeat Simple_repeat 3 70 0 3 1012 319 331 0 0 chr15 56031568 56031689 -47463285 + Lx7 LINE L1 5635 5755 -1941 4 1012 255 214 129 0 chr15 56031866 56031936 -47463038 - ORR1E LTR MaLR -23 356 278 4 1012 273 305 72 72 chr15 56031965 56032117 -47462857 - ORR1E LTR MaLR -110 249 98 4 1012 261 0 0 0 chr15 56032826 56032855 -47462119 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 4 1012 202 241 23 0 chr15 56033036 56033123 -47461851 + CT-rich Low_complexity Low_complexity 1 89 0 4 1012 222 326 32 0 chr15 56033480 56033575 -47461399 + MIR SINE MIR 74 171 -91 4 1012 248 77 26 0 chr15 56033575 56033614 -47461360 + (TGAA)n Simple_repeat Simple_repeat 4 43 0 4 1012 6785 169 39 14 chr15 56034958 56036202 -47458772 - Lx4A LINE L1 -2 7056 5782 4 1012 21 0 0 0 chr15 56036202 56036223 -47458751 + AT_rich Low_complexity Low_complexity 1 21 0 4 1012 10496 98 45 13 chr15 56036223 56038924 -47456050 - Lx3_Mus LINE L1 -1 7008 4208 4 1012 2190 79 0 0 chr15 56038922 56039250 -47455724 - Lx3_Mus LINE L1 -2683 3203 2876 4 1012 33643 66 3 3 chr15 56039242 56045450 -47449524 - L1Md_F2 LINE L1 -1 6584 278 4 1012 9896 108 68 4 chr15 56045451 56047374 -47447600 - Lx3_Mus LINE L1 -2992 2894 849 4 1012 1580 100 12 4 chr15 56047369 56047621 -47447353 - L1_Mur2 LINE L1 -1820 4057 3804 5 1012 204 125 0 0 chr15 56047639 56047671 -47447303 + (TTA)n Simple_repeat Simple_repeat 2 33 0 5 1012 441 182 19 39 chr15 56047676 56047779 -47447195 - Lx3B LINE L1 -4 6969 6869 5 1012 7765 125 8 13 chr15 56047781 56049101 -47445873 + L1_Mur2 LINE L1 3460 4772 -1105 5 1012 4435 136 24 17 chr15 56049096 56049936 -47445038 - L1_Mur2 LINE L1 -2064 3813 2968 5 1012 550 121 0 10 chr15 56049945 56050045 -47444929 - L1_Mur2 LINE L1 -3634 2243 2145 5 1012 760 261 33 28 chr15 56051188 56051401 -47443573 - B3 SINE B2 0 216 3 5 1012 458 346 153 38 chr15 56052159 56052531 -47442443 + MLT1D LTR MaLR 19 433 -72 5 1012 243 0 0 0 chr15 56052550 56052577 -47442397 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1012 1137 22 0 0 chr15 56052577 56052712 -47442262 + (GA)n Simple_repeat Simple_repeat 1 136 0 5 1012 456 335 6 37 chr15 56052712 56052876 -47442098 - RSINE1 SINE B4 -6 159 1 5 1012 447 35 0 0 chr15 56053630 56053687 -47441287 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 1012 405 0 0 0 chr15 56053687 56053731 -47441243 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1012 225 0 0 0 chr15 56053745 56053770 -47441204 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1012 1099 82 7 0 chr15 56053770 56053917 -47441057 - B1_Mus1 SINE Alu 0 148 1 6 1012 180 321 72 18 chr15 56053971 56054082 -47440892 - L3 LINE CR1 -832 3657 3541 6 1012 368 333 8 31 chr15 56056161 56056291 -47438683 - B4A SINE B4 -2 290 164 6 1012 210 37 0 0 chr15 56057082 56057109 -47437865 + (CAA)n Simple_repeat Simple_repeat 2 28 0 6 1012 25 51 0 0 chr15 56057641 56057680 -47437294 + AT_rich Low_complexity Low_complexity 1 39 0 6 1012 1725 140 52 34 chr15 56058840 56059224 -47435750 + RLTR12A LTR ERVK 1 406 -122 6 1012 14919 75 13 80 chr15 56059233 56061597 -47433377 + L1_Mm LINE L1 3357 5560 -323 6 1012 234 289 61 9 chr15 56061597 56061623 -47433351 + RLTR12A LTR ERVK 390 416 -112 6 1012 7507 65 11 3 chr15 56061623 56062603 -47432371 + L1Md_F2 LINE L1 5587 6574 -8 6 1012 682 153 15 15 chr15 56062603 56062738 -47432236 + RLTR12A LTR ERVK 417 568 0 6 1012 513 47 0 0 chr15 56063147 56063211 -47431763 + (CA)n Simple_repeat Simple_repeat 2 65 0 7 1012 272 272 524 47 chr15 56063255 56063423 -47431551 + MLT1A0 LTR MaLR 119 366 -42 7 1012 1578 261 27 19 chr15 56063540 56063950 -47431024 - MTC LTR MaLR -8 413 1 7 1012 2838 108 29 25 chr15 56065061 56065506 -47429468 - Lx3_Mus LINE L1 -1 7008 6562 7 1012 305 48 0 0 chr15 56065488 56065530 -47429444 - L1_Mus3 LINE L1 -339 6299 6258 7 1012 245 49 0 0 chr15 56065529 56065570 -47429404 + L1_Mus2 LINE L1 6526 6566 0 7 1012 2876 80 15 18 chr15 56065582 56065979 -47428995 - Lx3_Mus LINE L1 -416 6593 6198 7 1012 780 111 42 0 chr15 56065978 56066122 -47428852 + Lx3_Mus LINE L1 6029 6178 -831 7 1012 888 101 0 0 chr15 56066539 56066668 -47428306 + (TCTCC)n Simple_repeat Simple_repeat 5 133 0 7 1012 4242 155 35 3 chr15 56066670 56067388 -47427586 - Lx LINE L1 -1 6653 5913 7 1012 404 355 85 15 chr15 56067502 56067762 -47427212 - MER31A LTR ERV1 -14 471 194 7 1012 284 289 21 43 chr15 56067771 56067865 -47427109 + B4 SINE B4 197 288 -4 7 1012 473 246 99 35 chr15 56067900 56068102 -47426872 - MER33 DNA MER1_type -72 252 38 8 1012 293 309 108 9 chr15 56068491 56068506 -47426468 + B1_Mur1 SINE Alu 22 143 -6 8 1012 388 274 62 10 chr15 56068506 56068602 -47426372 + ID_B1 SINE B4 118 218 -6 8 1012 456 19 0 0 chr15 56068651 56068704 -47426270 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 8 1012 189 0 0 0 chr15 56068706 56068727 -47426247 + (TG)n Simple_repeat Simple_repeat 1 21 0 8 1012 646 284 93 0 chr15 56068727 56068889 -47426085 - B3A SINE B2 -21 177 1 8 1012 1004 307 72 61 chr15 56069092 56069405 -47425569 - L1MB7 LINE L1 -58 6126 5794 8 1012 386 299 20 20 chr15 56069405 56069552 -47425422 - B1F SINE Alu -1 148 2 8 1012 1004 307 72 61 chr15 56069552 56070059 -47424915 - L1MB7 LINE L1 -391 5793 5297 8 1012 433 312 55 28 chr15 56070463 56070644 -47424330 - MER58A DNA MER1_type -1 223 38 8 1012 452 280 111 79 chr15 56070914 56071104 -47423870 - B3 SINE B2 0 216 21 8 1012 777 359 60 31 chr15 56071277 56071795 -47423179 - Lx8 LINE L1 -162 7311 6779 9 1012 235 254 156 33 chr15 56071925 56071971 -47423003 - L1_Rod LINE L1 -423 5457 5411 9 1012 2392 149 44 10 chr15 56071971 56072378 -47422596 + MTC LTR MaLR 1 421 0 9 1012 235 254 156 33 chr15 56072378 56072453 -47422521 - L1_Rod LINE L1 -470 5410 5321 9 1012 4193 58 0 9 chr15 56072573 56073117 -47421857 - L1Md_F2 LINE L1 0 6582 6044 9 1012 1120 90 7 0 chr15 56073191 56073336 -47421638 - B1_Mus2 SINE Alu 0 147 2 9 1012 440 292 77 134 chr15 56073337 56074137 -47420837 - L1_Rod LINE L1 -693 5187 4478 9 1012 806 166 23 2 chr15 56074137 56074290 -47420684 + ORR1A2 LTR MaLR 1 171 -175 9 1012 887 92 69 0 chr15 56074724 56074855 -47420119 + B1_Mus1 SINE Alu 2 141 -7 9 1012 630 39 0 0 chr15 56074855 56074932 -47420042 + (GA)n Simple_repeat Simple_repeat 2 78 0 9 1012 186 143 0 0 chr15 56076003 56076038 -47418936 + (C)n Simple_repeat Simple_repeat 1 35 0 9 1012 643 289 95 14 chr15 56077233 56077581 -47417393 - Lx9 LINE L1 -21 7623 7248 9 1012 2720 231 50 41 chr15 56077583 56078188 -47416786 + Lx5 LINE L1 6441 7050 0 1 1012 492 317 13 51 chr15 56078212 56078461 -47416513 - Lx9 LINE L1 -460 7184 6841 9 1012 508 297 107 11 chr15 56078555 56078732 -47416242 - B3A SINE B2 -4 194 1 1 1012 338 313 82 57 chr15 56078733 56078977 -47415997 + Lx8 LINE L1 7223 7472 -1 1 1012 521 122 0 0 chr15 56079309 56079383 -47415591 + B3 SINE B2 5 78 -138 1 1012 359 271 141 45 chr15 56079671 56079984 -47414990 + L1M5 LINE L1 4978 5320 -826 1 1012 519 17 0 0 chr15 56081135 56081195 -47413779 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 1012 7254 159 30 12 chr15 56081251 56082990 -47411984 - Lx5 LINE L1 -108 6942 5171 1 1012 37859 38 2 3 chr15 56086370 56092402 -47402572 - L1Md_T LINE L1 -1 6584 465 1 1012 346 323 78 18 chr15 56092497 56092664 -47402310 + MLT1G3 LTR MaLR 288 464 -131 1 1012 262 45 45 0 chr15 56093342 56093386 -47401588 + (TCTG)n Simple_repeat Simple_repeat 1 46 0 1 1012 433 161 33 25 chr15 56093386 56093507 -47401467 + C-rich Low_complexity Low_complexity 1 122 0 1 1012 207 267 0 16 chr15 56093864 56093925 -47401049 + GA-rich Low_complexity Low_complexity 3 62 0 1 1012 426 268 15 68 chr15 56094815 56094947 -47400027 + Lx9 LINE L1 7198 7322 -322 1 1012 574 214 45 58 chr15 56094968 56095191 -47399783 + Lx9 LINE L1 7419 7638 -6 1 1012 369 326 66 26 chr15 56095194 56095421 -47399553 + Tigger7 DNA MER2_type 2248 2483 -8 1 1012 734 259 207 15 chr15 56095447 56095717 -47399257 - Lx9 LINE L1 -919 6725 6404 1 1012 288 316 35 92 chr15 56095770 56095944 -47399030 - Lx9 LINE L1 -6994 614 451 1 1012 1359 212 45 74 chr15 56095949 56096463 -47398511 - L1_Rod LINE L1 -2297 3550 3052 1 1012 1607 211 175 80 chr15 56096464 56096938 -47398036 - MT2A LTR ERVL 0 533 15 1 1012 1884 246 143 22 chr15 56096948 56097676 -47397298 - L1_Rod LINE L1 -3142 2705 1890 1 1012 600 43 33 0 chr15 56097743 56097835 -47397139 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 1 1012 801 221 27 69 chr15 56097842 56098104 -47396870 - L1_Rod LINE L1 -6489 1119 869 1 1013 222 91 0 0 chr15 56098964 56098997 -47395977 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 1 1013 243 0 0 0 chr15 56099432 56099459 -47395515 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1013 266 253 0 0 chr15 56099459 56099542 -47395432 + (CAGAGA)n Simple_repeat Simple_repeat 2 84 0 1 1013 529 167 8 16 chr15 56099548 56099670 -47395304 + GA-rich Low_complexity Low_complexity 5 125 0 1 1013 388 284 100 13 chr15 56100417 56100567 -47394407 - MER58A DNA MER1_type -15 209 47 1 1013 1159 290 34 21 chr15 56101079 56101407 -47393567 + MTEb LTR MaLR 27 358 -21 1 1013 426 379 91 4 chr15 56101600 56101841 -47393133 - MLT1G LTR MaLR -318 273 12 1 1013 32 57 0 0 chr15 56101887 56101940 -47393034 + AT_rich Low_complexity Low_complexity 1 53 0 1 1013 185 146 21 0 chr15 56101940 56101988 -47392986 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 1 1013 396 311 10 0 chr15 56102106 56102209 -47392765 - ID_B1 SINE B4 -31 193 90 1 1013 234 0 0 0 chr15 56102347 56102373 -47392601 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 1013 185 393 28 43 chr15 56103767 56103908 -47391066 - MIRb SINE MIR -2 266 128 1 1013 533 306 104 41 chr15 56103925 56104463 -47390511 + L1MA9 LINE L1 5452 6023 -289 1 1013 265 281 0 40 chr15 56104562 56104662 -47390312 + (TATATG)n Simple_repeat Simple_repeat 6 101 0 1 1013 364 323 101 71 chr15 56104699 56104966 -47390008 - B4A SINE B4 -17 275 1 1 1013 342 262 62 6 chr15 56104966 56105127 -47389847 + L1MA9 LINE L1 6117 6286 -5 1 1013 222 143 0 0 chr15 56105312 56105361 -47389613 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1013 5251 187 19 42 chr15 56106329 56107479 -47387495 - Lx2B LINE L1 -4 6996 5873 1 1013 1395 193 390 0 chr15 56107479 56107740 -47387234 + L1_Mur1 LINE L1 5309 5654 -232 1 1013 6800 35 62 10 chr15 56107740 56108612 -47386362 + L1Md_F3 LINE L1 5668 6584 0 1 1013 1395 193 390 0 chr15 56108612 56108760 -47386214 + L1_Mur1 LINE L1 5655 5877 -9 1 1013 293 235 69 23 chr15 56111227 56111314 -47383660 - MTEa LTR MaLR -19 360 270 1 1013 587 251 152 0 chr15 56112096 56112267 -47382707 - B3A SINE B2 0 198 2 1 1013 23 33 0 0 chr15 56112838 56112868 -47382106 + AT_rich Low_complexity Low_complexity 1 30 0 1 1013 189 245 0 39 chr15 56113174 56113225 -47381749 - L3b LINE CR1 -227 255 207 1 1013 192 268 113 0 chr15 56113936 56114007 -47380967 - L4 LINE RTE -614 1415 1337 1 1013 243 289 0 26 chr15 56114021 56114099 -47380875 + A-rich Low_complexity Low_complexity 5 80 0 1 1013 4043 183 65 15 chr15 56114391 56115250 -47379724 - RMER19B LTR ERVK 0 902 1 1 1013 623 352 104 43 chr15 56115438 56115833 -47379141 - RMER15 LTR ERVL -156 419 1 1 1013 3175 218 48 113 chr15 56116359 56117496 -47377478 - RMER1B Other Other -3 1063 1 1 1013 253 284 0 24 chr15 56117531 56117614 -47377360 + RMER1A Other Other 8 88 -942 1 1013 587 358 98 23 chr15 56119013 56119442 -47375532 + MLT1J-int LTR MaLR 130 590 -797 1 1013 783 168 0 0 chr15 56119541 56119654 -47375320 + B3 SINE B2 1 113 -103 1 1013 564 350 0 0 chr15 56120202 56120339 -47374635 + RSINE1 SINE B4 4 140 -25 1 1013 305 125 0 18 chr15 56120345 56120402 -47374572 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 1013 3406 20 8 0 chr15 56120659 56121052 -47373922 - MTA_Mm LTR MaLR 0 396 1 1 1013 9089 33 6 1 chr15 56121052 56122143 -47372831 - MTA_Mm-int LTR MaLR 0 1098 3 1 1013 4302 24 0 2 chr15 56122147 56122641 -47372333 - MT2_Mm LTR ERVL 0 493 1 1 1013 514 287 124 26 chr15 56122907 56123100 -47371874 - B3 SINE B2 -4 212 1 1 1013 21 36 0 0 chr15 56123543 56123571 -47371403 + AT_rich Low_complexity Low_complexity 1 28 0 1 1013 2731 92 36 72 chr15 56123954 56124400 -47370574 + RLTR23 LTR ERV1 1 430 0 1 1013 252 0 0 0 chr15 56124668 56124696 -47370278 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1013 474 18 0 0 chr15 56124697 56124752 -47370222 + (TAA)n Simple_repeat Simple_repeat 2 56 0 1 1013 352 147 0 56 chr15 56125234 56125342 -47369632 + (CATATA)n Simple_repeat Simple_repeat 1 102 0 1 1013 210 301 86 26 chr15 56125703 56125819 -47369155 + BC1_Mm scRNA scRNA 5 127 -25 1 1013 303 237 0 0 chr15 56125989 56126082 -47368892 + (TA)n Simple_repeat Simple_repeat 2 94 0 1 1013 21 36 0 0 chr15 56128165 56128193 -47366781 + AT_rich Low_complexity Low_complexity 1 28 0 1 1013 6361 177 70 22 chr15 56128193 56129588 -47365386 - Lx5 LINE L1 -3 7047 5587 1 1013 399 268 55 48 chr15 56129935 56130100 -47364874 + RLTR23 LTR ERV1 265 430 0 1 1013 5191 173 24 19 chr15 56130101 56131186 -47363788 - Lx5 LINE L1 -302 5575 4486 1 1013 5083 191 73 20 chr15 56131160 56132862 -47362112 + Lx4B LINE L1 5191 7007 -51 1 1013 3165 60 0 0 chr15 56133287 56133686 -47361288 - L1Md_F2 LINE L1 -1 6581 6183 1 1013 328 309 0 21 chr15 56133922 56134018 -47360956 + B4A SINE B4 195 288 -4 1 1013 308 312 54 0 chr15 56134440 56134533 -47360441 + B4A SINE B4 3 100 -192 1 1013 828 30 0 0 chr15 56134840 56134939 -47360035 + (GA)n Simple_repeat Simple_repeat 2 100 0 1 1013 423 0 0 0 chr15 56135470 56135517 -47359457 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1013 17139 21 0 0 chr15 56136602 56139375 -47355599 - L1Md_T LINE L1 0 6582 3809 1 1013 279 0 0 0 chr15 56140862 56140893 -47354081 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1 1013 695 322 57 28 chr15 56140937 56141362 -47353612 - Lx7 LINE L1 -232 7241 6805 1 1013 498 17 0 0 chr15 56141385 56141444 -47353530 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 1013 773 322 95 40 chr15 56141499 56141920 -47353054 - Lx7 LINE L1 -802 6671 6228 1 1013 794 132 7 0 chr15 56141920 56142056 -47352918 + (GA)n Simple_repeat Simple_repeat 2 138 0 1 1013 786 22 0 0 chr15 56142048 56142140 -47352834 + (GAA)n Simple_repeat Simple_repeat 1 92 0 1 1013 261 119 0 0 chr15 56142137 56142179 -47352795 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 1013 2614 282 37 14 chr15 56142333 56143564 -47351410 - Lx7 LINE L1 -1645 6051 4792 1 1013 1219 187 106 100 chr15 56143567 56143631 -47351343 - ORR1C1 LTR MaLR 0 378 324 1 1013 2905 64 0 0 chr15 56143631 56143991 -47350983 - L1_Mus1 LINE L1 -3 6564 6205 1 1013 1219 187 106 100 chr15 56143991 56144247 -47350727 - ORR1C1 LTR MaLR -55 323 56 1 1013 732 265 58 31 chr15 56144286 56144477 -47350497 - B3A SINE B2 -10 206 11 1 1013 456 51 0 0 chr15 56144627 56144686 -47350288 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 1 1013 233 0 62 0 chr15 56144710 56144742 -47350232 + (CAGAGA)n Simple_repeat Simple_repeat 1 34 0 1 1013 664 272 6 80 chr15 56144938 56145095 -47349879 + RSINE1 SINE B4 3 150 -15 1 1013 216 0 0 0 chr15 56145095 56145119 -47349855 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1013 434 18 18 0 chr15 56145119 56145173 -47349801 + (GA)n Simple_repeat Simple_repeat 2 57 0 1 1013 664 272 6 80 chr15 56145173 56145190 -47349784 + RSINE1 SINE B4 151 164 -1 1 1013 219 333 43 14 chr15 56145305 56145375 -47349599 - ID2 SINE ID -10 73 2 1 1013 1188 48 7 0 chr15 56145752 56145898 -47349076 - B1_Mus1 SINE Alu 0 148 2 1 1013 23 54 0 0 chr15 56147446 56147483 -47347491 + AT_rich Low_complexity Low_complexity 1 37 0 1 1013 21 82 0 0 chr15 56147764 56147813 -47347161 + AT_rich Low_complexity Low_complexity 1 49 0 1 1013 450 53 0 0 chr15 56148149 56148206 -47346768 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1013 5220 238 50 59 chr15 56148720 56148881 -47346093 - Lx6 LINE L1 -4 7456 7278 1 1013 189 121 0 0 chr15 56148881 56148914 -47346060 + (ATATG)n Simple_repeat Simple_repeat 3 35 0 1 1013 5220 238 50 59 chr15 56148914 56150306 -47344668 - Lx6 LINE L1 -183 7277 5917 1 1013 756 52 10 0 chr15 56150445 56150541 -47344433 + RLTR9B2 LTR ERVK 1 97 -323 1 1013 492 160 140 9 chr15 56150550 56150657 -47344317 - Lx7 LINE L1 -658 7038 6918 1 1013 1571 251 67 3 chr15 56151260 56151647 -47343327 - MTD LTR MaLR -5 414 3 1 1013 907 278 62 16 chr15 56152142 56152398 -47342576 - RLTR18B LTR ERVK -4 508 241 1 1013 3344 201 63 15 chr15 56152412 56153406 -47341568 - Lx4B LINE L1 0 6976 5932 1 1013 347 121 0 0 chr15 56153405 56153463 -47341511 + Lx2B LINE L1 5857 5914 -1086 1 1013 698 298 91 9 chr15 56153464 56153694 -47341280 - RLTR18B LTR ERVK -263 249 1 1 1013 397 265 21 31 chr15 56153702 56153893 -47341081 - MER33 DNA MER1_type 0 324 136 1 1013 3478 30 0 0 chr15 56153958 56154354 -47340620 + MTA_Mm LTR MaLR 1 396 0 1 1013 441 0 0 0 chr15 56154940 56154989 -47339985 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1013 242 333 134 37 chr15 56155028 56155162 -47339812 - B4A SINE B4 -34 258 112 2 1013 413 296 123 15 chr15 56155543 56155839 -47339135 + MLT1D LTR MaLR 1 414 -91 2 1013 274 297 0 0 chr15 56156615 56156689 -47338285 + Tigger5 DNA MER2_type 2290 2363 -43 2 1013 513 0 0 0 chr15 56156744 56156801 -47338173 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 2 1013 3501 146 45 2 chr15 56157130 56157734 -47337240 - Lx2B LINE L1 -740 6260 5631 2 1013 2597 166 4 12 chr15 56157732 56158251 -47336723 + L1_Mur2 LINE L1 4783 5297 -580 2 1013 6580 52 2 31 chr15 56158263 56159209 -47335765 + L1_Mus2 LINE L1 5684 6566 0 2 1013 1759 178 0 0 chr15 56159209 56159535 -47335439 + L1_Mur2 LINE L1 5285 5610 -267 2 1013 253 290 59 20 chr15 56161019 56161121 -47333853 - MIR SINE MIR 0 262 157 2 1013 309 82 0 0 chr15 56161767 56161816 -47333158 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 2 1013 471 315 9 0 chr15 56161816 56161927 -47333047 - B3 SINE B2 -100 116 5 2 1013 207 330 21 21 chr15 56162076 56162169 -47332805 + MIRc SINE MIR 69 161 -107 2 1013 1123 313 62 50 chr15 56162207 56162904 -47332070 + Lx9 LINE L1 6805 7509 -135 2 1013 22 56 0 0 chr15 56162994 56163030 -47331944 + AT_rich Low_complexity Low_complexity 1 36 0 2 1013 259 185 19 0 chr15 56164078 56164132 -47330842 + Lx7 LINE L1 7244 7298 -398 2 1013 225 231 222 40 chr15 56164214 56164340 -47330634 + MER5A1 DNA MER1_type 18 166 0 2 1013 225 65 0 0 chr15 56164827 56164858 -47330116 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1013 697 198 83 0 chr15 56166680 56166837 -47328137 - MER121 Unknown Unknown -172 240 71 2 1013 441 0 0 0 chr15 56167454 56167503 -47327471 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1013 231 170 0 0 chr15 56167547 56167594 -47327380 + T-rich Low_complexity Low_complexity 1 47 0 2 1013 2005 44 0 84 chr15 56167597 56167895 -47327079 - L1Md_F3 LINE L1 -12 6572 6300 2 1013 406 61 30 0 chr15 56168436 56168502 -47326472 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 1013 1196 203 40 4 chr15 56169447 56169694 -47325280 - MER45C DNA Tip100 0 953 698 2 1013 432 0 0 0 chr15 56170217 56170265 -47324709 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1013 261 301 31 124 chr15 56170268 56170397 -47324577 + B1F2 SINE Alu 33 149 0 2 1013 372 351 0 15 chr15 56170409 56170545 -47324429 - MER45C DNA Tip100 -819 134 1 2 1013 247 318 51 43 chr15 56170731 56170869 -47324105 + MLT1A0 LTR MaLR 31 169 -196 2 1013 256 232 51 31 chr15 56171050 56171148 -47323826 - Lx9 LINE L1 -179 7465 7366 2 1013 263 288 15 0 chr15 56171614 56171680 -47323294 + ID4 SINE ID 3 69 -14 2 1013 204 82 26 140 chr15 56171694 56171808 -47323166 + CT-rich Low_complexity Low_complexity 1 101 0 2 1013 336 83 0 0 chr15 56171817 56171865 -47323109 + (TCC)n Simple_repeat Simple_repeat 1 48 0 2 1013 225 0 0 0 chr15 56171974 56171999 -47322975 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 2 1013 306 0 0 0 chr15 56172691 56172725 -47322249 + (CAAA)n Simple_repeat Simple_repeat 4 37 0 2 1013 207 0 0 0 chr15 56176383 56176406 -47318568 + (CCCCCT)n Simple_repeat Simple_repeat 1 23 0 2 1013 22 0 0 0 chr15 56178258 56178280 -47316694 + AT_rich Low_complexity Low_complexity 1 22 0 2 1013 267 54 0 0 chr15 56178333 56178370 -47316604 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 2 1013 271 237 13 13 chr15 56178383 56178460 -47316514 + MLT1A1 LTR MaLR 300 376 -32 2 1013 432 0 0 0 chr15 56179608 56179656 -47315318 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1013 677 176 0 108 chr15 56179716 56179729 -47315245 - B1_Mus1 SINE Alu 0 148 137 2 1013 306 0 0 0 chr15 56179729 56179763 -47315211 + (TC)n Simple_repeat Simple_repeat 1 34 0 2 1013 677 176 0 108 chr15 56179763 56179915 -47315059 - B1_Mus1 SINE Alu -12 136 1 2 1013 2016 250 107 29 chr15 56180396 56180993 -47313981 + Lx6 LINE L1 6781 7424 -36 2 1013 186 43 0 0 chr15 56181000 56181023 -47313951 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 2 1013 354 363 38 21 chr15 56182189 56182375 -47312599 + MER5A DNA MER1_type 1 189 0 2 1013 1439 162 34 47 chr15 56183042 56183340 -47311634 - RLTR11A LTR ERVK -3 525 232 2 1013 40 59 0 0 chr15 56183752 56183820 -47311154 + AT_rich Low_complexity Low_complexity 1 68 0 2 1013 243 320 27 64 chr15 56184366 56184476 -47310498 - MER5B DNA MER1_type -67 111 6 2 1013 292 308 132 0 chr15 56184953 56185044 -47309930 - MLT1D LTR MaLR -381 124 22 2 1013 217 378 40 59 chr15 56186302 56186454 -47308520 + L2a LINE L2 3278 3426 0 2 1013 2814 135 73 4 chr15 56186656 56187124 -47307850 - Lx3A LINE L1 -2 6979 6480 2 1013 247 343 44 104 chr15 56187128 56187497 -47307477 + MT2A LTR ERVL 134 477 -56 2 1013 189 0 0 0 chr15 56187497 56187518 -47307456 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1013 1113 23 0 0 chr15 56187518 56187649 -47307325 + (GA)n Simple_repeat Simple_repeat 2 133 0 2 1013 247 343 44 104 chr15 56187649 56187691 -47307283 + MT2A LTR ERVL 478 520 -13 2 1013 180 111 0 0 chr15 56188361 56188388 -47306586 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 2 1013 688 169 8 24 chr15 56188390 56188517 -47306457 - B1_Mur2 SINE Alu -1 148 24 2 1013 219 333 32 89 chr15 56188395 56188553 -47306421 - B4A SINE B4 -71 221 73 2 1013 392 316 147 13 chr15 56188540 56188697 -47306277 - B3A SINE B2 -15 183 6 2 1013 45 75 0 0 chr15 56188874 56188968 -47306006 + AT_rich Low_complexity Low_complexity 1 94 0 2 1013 451 395 43 10 chr15 56189086 56189385 -47305589 - L1MB7 LINE L1 -133 6051 5743 2 1013 180 0 0 0 chr15 56190178 56190198 -47304776 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1013 2811 122 13 6 chr15 56190714 56191284 -47303690 + RMER17B LTR ERVK 1 756 -202 2 1013 3060 228 31 84 chr15 56192222 56193118 -47301856 + RMER17B LTR ERVK 1 849 -109 2 1013 35264 28 1 7 chr15 56193357 56198545 -47296429 + L1Md_A LINE L1 440 5586 -297 2 1013 8406 35 0 0 chr15 56198545 56199541 -47295433 + L1Md_A LINE L1 5587 6582 0 2 1013 29 0 0 0 chr15 56199652 56199681 -47295293 + AT_rich Low_complexity Low_complexity 1 29 0 2 1013 396 248 45 96 chr15 56200341 56200519 -47294455 - RMER10A LTR ERVL -13 429 261 2 1013 1004 218 42 62 chr15 56200540 56200799 -47294175 - ORR1C1 LTR MaLR -122 256 3 2 1013 567 108 0 0 chr15 56200831 56200924 -47294050 + (TC)n Simple_repeat Simple_repeat 2 94 0 2 1013 18078 181 30 27 chr15 56202187 56203400 -47291574 + Lx4B LINE L1 836 2051 -3826 2 1013 540 0 0 0 chr15 56203400 56203460 -47291514 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 1013 387 0 0 0 chr15 56203460 56203502 -47291472 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1013 18078 169 32 27 chr15 56203502 56204891 -47290083 + Lx4B LINE L1 2052 3471 -2406 2 1013 243 0 0 0 chr15 56204891 56204918 -47290056 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1013 18078 169 32 27 chr15 56204918 56206124 -47288850 + Lx4B LINE L1 3472 4729 -1148 2 1013 185 0 40 0 chr15 56206124 56206149 -47288825 + (CAAAC)n Simple_repeat Simple_repeat 5 30 0 2 1013 18078 169 32 27 chr15 56206149 56206712 -47288262 + Lx4B LINE L1 4730 5227 -650 2 1013 4109 223 56 27 chr15 56206709 56208009 -47286965 + Lx4B LINE L1 5721 7058 0 2 1013 24 53 0 0 chr15 56208062 56208100 -47286874 + AT_rich Low_complexity Low_complexity 1 38 0 2 1013 1997 258 118 22 chr15 56209182 56209757 -47285217 + Lx8 LINE L1 6635 7239 -234 2 1013 509 55 0 14 chr15 56209757 56209831 -47285143 + (TTTTA)n Simple_repeat Simple_repeat 2 74 0 2 1013 1997 258 118 22 chr15 56209831 56210021 -47284953 + Lx8 LINE L1 7240 7473 0 2 1013 216 111 0 0 chr15 56210030 56210066 -47284908 + (TTA)n Simple_repeat Simple_repeat 1 36 0 2 1013 200 257 0 26 chr15 56210568 56210644 -47284330 + CT-rich Low_complexity Low_complexity 4 77 0 2 1013 780 258 77 25 chr15 56210818 56211184 -47283790 + Lx9 LINE L1 7245 7629 -15 2 1013 6332 138 10 56 chr15 56211279 56211783 -47283191 + Lx LINE L1 5295 5797 -857 2 1013 972 130 7 0 chr15 56211783 56211929 -47283045 + B1_Mus1 SINE Alu 2 148 0 2 1013 6332 120 24 45 chr15 56211929 56212807 -47282167 + Lx LINE L1 5798 6653 -1 2 1013 1287 70 0 0 chr15 56212823 56212994 -47281980 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 2 1013 209 346 135 0 chr15 56213125 56213229 -47281745 - MIRm SINE MIR -92 184 67 2 1013 252 167 0 0 chr15 56214029 56214083 -47280891 + Lx5 LINE L1 6992 7045 -5 2 1013 213 312 90 13 chr15 56214974 56215052 -47279922 - MIRm SINE MIR -24 252 169 2 1013 953 299 89 3 chr15 56215105 56215407 -47279567 - MTE2b LTR MaLR 0 379 52 2 1013 292 326 0 21 chr15 56215407 56215501 -47279473 - MTE2b LTR MaLR -287 92 1 2 1013 4796 34 0 0 chr15 56215518 56216079 -47278895 + L1Md_T LINE L1 6022 6582 0 2 1013 300 295 100 62 chr15 56216093 56216223 -47278751 - MIR SINE MIR -21 241 107 2 1013 1221 120 0 81 chr15 56217037 56217246 -47277728 + B2_Mm2 SINE B2 1 192 -3 2 1013 27 0 0 0 chr15 56217256 56217283 -47277691 + AT_rich Low_complexity Low_complexity 1 27 0 2 1013 508 143 16 0 chr15 56218308 56218434 -47276540 + (TAGA)n Simple_repeat Simple_repeat 4 131 0 2 1013 3425 74 26 4 chr15 56218533 56218995 -47275979 + Lx3_Mus LINE L1 6538 7009 0 2 1013 2275 64 227 0 chr15 56219133 56219477 -47275497 + BGLII_Mus LTR ERVK 1 422 0 2 1013 447 345 14 14 chr15 56219784 56219925 -47275049 - B1F SINE Alu 0 149 9 2 1013 1514 183 98 80 chr15 56221036 56221422 -47273552 + ORR1B1 LTR MaLR 2 394 0 2 1013 234 0 0 0 chr15 56223313 56223339 -47271635 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1013 598 205 42 21 chr15 56224146 56224300 -47270674 - B1_Mus1 SINE Alu -4 146 5 2 1013 252 0 0 0 chr15 56224361 56224389 -47270585 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 1013 12303 136 19 20 chr15 56224482 56227472 -47267502 - L1_Mus4 LINE L1 -4 6632 3653 2 1013 6501 75 23 10 chr15 56227461 56228431 -47266543 - MusHAL1 LINE L1 -1683 1029 48 2 126 32823 69 4 63 chr15 56228417 56232378 -47262596 - L1Md_F2 LINE L1 0 6582 2929 2 1014 8956 5 0 0 chr15 56232378 56233373 -47261601 + L1Md_A LINE L1 5587 6581 -1 2 1014 32823 100 6 64 chr15 56233373 56235939 -47259035 - L1Md_F2 LINE L1 -2955 2928 217 2 1014 3275 140 19 12 chr15 56235939 56236518 -47258456 - L1VL4 LINE L1 -5384 918 336 2 1014 21 0 0 0 chr15 56236527 56236548 -47258426 + AT_rich Low_complexity Low_complexity 1 21 0 3 1014 258 32 0 0 chr15 56237060 56237091 -47257883 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1014 4491 94 58 9 chr15 56237636 56238291 -47256683 - Lx3_Mus LINE L1 0 7009 6323 3 1014 225 0 0 0 chr15 56238906 56238931 -47256043 + (TTG)n Simple_repeat Simple_repeat 3 27 0 3 1014 710 300 137 31 chr15 56239304 56239655 -47255319 - MTD LTR MaLR -14 405 18 3 1014 299 250 25 0 chr15 56240212 56240291 -47254683 - RMER19C LTR ERVK 0 611 531 3 1014 1106 240 24 38 chr15 56240291 56240641 -47254333 - BGLII_B LTR ERVK 0 441 89 3 1014 1428 260 51 33 chr15 56240635 56241025 -47253949 - RMER19C LTR ERVK -76 535 139 3 1014 371 291 61 5 chr15 56241055 56241252 -47253722 - L1MA8 LINE L1 -5 6286 6079 3 1014 3088 107 9 0 chr15 56241369 56241798 -47253176 + RLTR10C LTR ERVK 1 433 -3 3 1014 1141 265 55 51 chr15 56241860 56242596 -47252378 - L1M2 LINE L1 -686 5482 4726 3 1014 325 370 65 43 chr15 56243228 56243505 -47251469 - MLT1A0 LTR MaLR 0 365 83 3 1014 198 192 0 0 chr15 56243625 56243677 -47251297 + (CAGAGA)n Simple_repeat Simple_repeat 2 53 0 3 1014 340 140 21 90 chr15 56243709 56243897 -47251077 + (CAGAGA)n Simple_repeat Simple_repeat 2 176 0 3 1014 4348 93 60 24 chr15 56245448 56246152 -47248822 - MusHAL1 LINE L1 -626 2086 1358 3 1014 22 0 0 0 chr15 56247211 56247233 -47247741 + AT_rich Low_complexity Low_complexity 1 22 0 3 1014 24 0 0 0 chr15 56247383 56247407 -47247567 + AT_rich Low_complexity Low_complexity 1 24 0 3 1014 275 363 8 53 chr15 56247602 56247733 -47247241 + B4A SINE B4 4 128 -164 3 1014 237 132 0 0 chr15 56247832 56247870 -47247104 + (A)n Simple_repeat Simple_repeat 1 38 0 3 1014 274 179 12 60 chr15 56249027 56249110 -47245864 + Lx8 LINE L1 7392 7470 -3 3 1014 227 204 0 0 chr15 56249168 56249212 -47245762 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 3 1014 288 0 0 0 chr15 56249872 56249904 -47245070 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1014 385 384 89 48 chr15 56250488 56250781 -47244193 + LTR33B LTR ERVL 60 364 -139 3 1014 459 66 45 2 chr15 56250791 56250891 -47244083 - B1_Mus2 SINE Alu 0 150 43 3 1014 254 269 102 37 chr15 56251314 56251422 -47243552 + L2a LINE L2 3312 3426 0 3 1014 2256 110 0 0 chr15 56252678 56252988 -47241986 + L1_Mus3 LINE L1 6035 6344 -294 3 1014 9516 90 23 22 chr15 56252986 56254698 -47240276 + Lx3_Mus LINE L1 5289 7008 -1 3 1014 53 90 0 0 chr15 56255025 56255169 -47239805 + AT_rich Low_complexity Low_complexity 1 144 0 3 1014 738 171 17 0 chr15 56255174 56255350 -47239624 + (TA)n Simple_repeat Simple_repeat 1 179 0 3 1014 956 118 50 0 chr15 56255405 56255566 -47239408 + L1Md_Gf LINE L1 109 277 -6245 3 1014 846 277 99 82 chr15 56255573 56255927 -47239047 + MTEb LTR MaLR 20 379 0 3 1014 180 0 0 0 chr15 56256103 56256123 -47238851 + (GAAA)n Simple_repeat Simple_repeat 3 22 0 3 1014 288 375 142 51 chr15 56256132 56256385 -47238589 - LTR16B1 LTR ERVL -197 283 8 3 1014 415 342 20 13 chr15 56256495 56256646 -47238328 - MER5A DNA MER1_type -36 153 2 3 1014 339 231 33 50 chr15 56256875 56257057 -47237917 + (TATG)n Simple_repeat Simple_repeat 2 180 0 3 1014 453 160 34 34 chr15 56257070 56257245 -47237729 + (TATG)n Simple_repeat Simple_repeat 3 177 0 3 1014 266 267 25 25 chr15 56257299 56257418 -47237556 + (TATG)n Simple_repeat Simple_repeat 4 122 0 3 1014 677 257 71 53 chr15 56258583 56258809 -47236165 + B4A SINE B4 3 232 -60 3 1014 625 282 63 63 chr15 56258810 56258999 -47235975 + B3 SINE B2 3 191 -25 3 1014 219 353 113 69 chr15 56258999 56259084 -47235890 + B4A SINE B4 3 288 -4 3 1014 273 57 0 0 chr15 56259088 56259123 -47235851 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 1014 219 36 0 0 chr15 56259207 56259235 -47235739 + (T)n Simple_repeat Simple_repeat 1 28 0 3 1014 190 324 27 27 chr15 56259319 56259392 -47235582 - MER5A DNA MER1_type 0 189 117 3 1014 25 0 0 0 chr15 56260151 56260176 -47234798 + AT_rich Low_complexity Low_complexity 1 25 0 3 1014 324 311 19 5 chr15 56261520 56261681 -47233293 + L1MA4A LINE L1 5674 5835 -12 3 1014 439 284 17 25 chr15 56263884 56264003 -47230971 + MTE2b LTR MaLR 262 379 0 3 1014 286 304 0 0 chr15 56264347 56264416 -47230558 - ID4_ SINE ID -14 69 1 3 1014 427 306 21 14 chr15 56265013 56265161 -47229813 + L1MA4A LINE L1 5770 5922 -381 3 1014 196 186 17 17 chr15 56265201 56265261 -47229713 + (TA)n Simple_repeat Simple_repeat 1 60 0 3 1014 991 189 14 28 chr15 56265938 56266142 -47228832 - Lx6 LINE L1 -586 6874 6474 3 1014 395 76 0 141 chr15 56267443 56267535 -47227439 + Lx LINE L1 6576 6654 0 3 1014 657 38 0 0 chr15 56267591 56267671 -47227303 + (TC)n Simple_repeat Simple_repeat 1 80 0 3 1014 543 31 0 0 chr15 56268319 56268384 -47226590 + (CATA)n Simple_repeat Simple_repeat 4 68 0 3 1014 3356 75 2 11 chr15 56268674 56269132 -47225842 - L1Md_F2 LINE L1 0 6582 6129 3 1014 511 310 69 78 chr15 56270395 56270796 -47224178 - L1MA7 LINE L1 -110 6181 5782 3 1014 544 83 46 0 chr15 56270796 56270905 -47224069 + (TAGA)n Simple_repeat Simple_repeat 4 117 0 3 1014 511 310 69 78 chr15 56270905 56271081 -47223893 - L1MA7 LINE L1 -510 5781 5609 3 1014 967 285 88 40 chr15 56271227 56271578 -47223396 + MTE2a LTR MaLR 11 378 -1 3 1014 277 323 60 30 chr15 56273450 56273584 -47221390 + MER5A DNA MER1_type 50 187 -2 3 1014 703 271 22 0 chr15 56274163 56274344 -47220630 - Lx9 LINE L1 -811 6833 6649 3 1014 25 31 0 0 chr15 56275621 56275653 -47219321 + AT_rich Low_complexity Low_complexity 1 32 0 3 1014 360 202 62 21 chr15 56275740 56275836 -47219138 - MER113 DNA MER1_type -344 177 78 3 1014 232 248 0 118 chr15 56275874 56275993 -47218981 - L1MDa LINE L1 -4208 2425 2321 3 1014 243 297 95 67 chr15 56276040 56276293 -47218681 - L1MDa LINE L1 -4297 2336 2077 3 1014 391 294 96 10 chr15 56276420 56276619 -47218355 - L1MDa LINE L1 -6109 524 309 3 1014 428 325 19 62 chr15 56277220 56277479 -47217495 - RLTR12B LTR ERVK -12 516 269 3 1014 497 58 0 14 chr15 56277518 56277588 -47217386 + (TCC)n Simple_repeat Simple_repeat 2 70 0 3 1014 582 300 15 70 chr15 56277591 56277891 -47217083 - RLTR11A2 LTR ERVK -163 278 9 3 1014 387 259 51 106 chr15 56278082 56278319 -47216655 - RMER10A LTR ERVL 0 442 219 3 1014 274 216 119 131 chr15 56278325 56278485 -47216489 - RMER10A LTR ERVL 0 442 285 3 1014 558 188 132 33 chr15 56278474 56278595 -47216379 - RMER10A LTR ERVL -309 133 1 3 1014 253 197 0 116 chr15 56279105 56279174 -47215800 + RMER10A LTR ERVL 78 138 -304 3 1014 4765 45 15 3 chr15 56280439 56281038 -47213936 + L1Md_F3 LINE L1 5978 6583 -1 3 1014 549 248 11 1 chr15 56281207 56281328 -47213646 + MT2A LTR ERVL 351 521 -63 3 1014 432 0 0 0 chr15 56281328 56281376 -47213598 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1014 740 297 4 21 chr15 56281380 56281617 -47213357 + Lx7 LINE L1 7025 7257 -439 3 1014 375 125 28 28 chr15 56281671 56281778 -47213196 + (TA)n Simple_repeat Simple_repeat 1 107 0 3 1014 1807 312 112 21 chr15 56281796 56282740 -47212234 - Lx7 LINE L1 -695 7001 5972 3 1014 358 385 92 5 chr15 56282741 56282937 -47212037 + MLT1E2 LTR MaLR 296 508 -116 3 1014 180 111 0 0 chr15 56282937 56282964 -47212010 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 3 1014 193 293 53 13 chr15 56283915 56283991 -47210983 - MIR SINE MIR -97 165 87 3 1014 495 48 0 0 chr15 56285049 56285111 -47209863 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 1014 441 209 18 0 chr15 56285112 56285275 -47209699 + (TA)n Simple_repeat Simple_repeat 2 167 0 3 1014 891 251 26 26 chr15 56285538 56285767 -47209207 + MTD LTR MaLR 1 229 -190 3 1014 365 182 10 0 chr15 56286190 56286289 -47208685 + (TG)n Simple_repeat Simple_repeat 2 101 0 3 1014 257 276 106 50 chr15 56286772 56286951 -47208023 - MER5C DNA MER1_type -109 204 16 3 1014 2242 101 125 5 chr15 56290456 56290823 -47204151 + IAPLTR2a LTR ERVK 1 411 0 3 1014 993 132 25 81 chr15 56290824 56291022 -47203952 + IAPEz-int LTR ERVK 9 195 -6286 3 1014 252 302 0 0 chr15 56291022 56291075 -47203899 + RLTR27 LTR ERVK 223 275 -34 3 1014 3437 64 25 22 chr15 56291078 56291722 -47203252 + IAPEz-int LTR ERVK 94 662 -5819 3 1014 2619 79 0 3 chr15 56291722 56292065 -47202909 + IAPEz-int LTR ERVK 1359 1700 -4781 3 1014 6768 46 4 11 chr15 56292058 56292893 -47202081 + IAPEz-int LTR ERVK 5651 6479 -2 3 1014 2414 100 78 5 chr15 56292895 56293278 -47201696 + IAPLTR2a LTR ERVK 1 411 0 3 1014 249 57 0 0 chr15 56293471 56293506 -47201468 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 3 1014 201 190 0 23 chr15 56293804 56293847 -47201127 + CT-rich Low_complexity Low_complexity 3 44 0 3 1014 195 139 0 0 chr15 56294696 56294732 -47200242 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 3 1014 477 0 0 0 chr15 56294905 56294958 -47200016 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1014 510 17 0 0 chr15 56294958 56295016 -47199958 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 1014 736 328 8 12 chr15 56295061 56295302 -47199672 - B4A SINE B4 -16 276 37 3 1014 261 114 0 0 chr15 56295472 56295507 -47199467 - U6 snRNA snRNA -72 35 1 3 1014 2733 133 7 9 chr15 56296626 56297067 -47197907 + Lx2B LINE L1 6561 7000 0 3 1014 507 331 11 34 chr15 56297482 56297657 -47197317 + B3 SINE B2 23 193 -23 3 1014 246 128 0 0 chr15 56297966 56298005 -47196969 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1014 238 326 109 0 chr15 56299433 56299525 -47195449 - MLT1B LTR MaLR -69 321 220 3 1014 404 224 18 6 chr15 56300380 56300546 -47194428 + (TA)n Simple_repeat Simple_repeat 2 169 0 3 1014 487 40 27 0 chr15 56300548 56300622 -47194352 + (TAGA)n Simple_repeat Simple_repeat 2 77 0 3 1014 525 32 0 0 chr15 56300807 56300870 -47194104 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1014 21 57 0 0 chr15 56301010 56301045 -47193929 + AT_rich Low_complexity Low_complexity 1 35 0 3 1014 2404 47 0 13 chr15 56301157 56301462 -47193512 + L1_Mus1 LINE L1 6266 6566 -1 3 1014 22 56 0 0 chr15 56301466 56301502 -47193472 + AT_rich Low_complexity Low_complexity 1 36 0 3 1014 347 306 9 0 chr15 56302213 56302321 -47192653 - Lx9 LINE L1 -604 7040 6932 3 1014 267 326 61 27 chr15 56303607 56303790 -47191184 + MIRb SINE MIR 8 202 -66 3 1014 1245 254 92 49 chr15 56304281 56304748 -47190226 - Lx6 LINE L1 -26 7434 6948 3 1014 630 273 62 31 chr15 56304809 56305164 -47189810 - L1MC3 LINE L1 -27 7758 7393 3 1014 27 62 0 0 chr15 56305250 56305298 -47189676 + AT_rich Low_complexity Low_complexity 1 48 0 4 1014 325 0 44 0 chr15 56305686 56305731 -47189243 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 4 1014 328 251 181 58 chr15 56305795 56306069 -47188905 + Lx9 LINE L1 5691 6029 -1615 4 1014 459 355 118 23 chr15 56306547 56306809 -47188165 - B4A SINE B4 0 292 6 4 1014 232 286 23 45 chr15 56306990 56307078 -47187896 - MIR SINE MIR -79 183 98 4 1014 39 22 0 0 chr15 56307265 56307311 -47187663 + AT_rich Low_complexity Low_complexity 1 46 0 4 1014 337 189 10 10 chr15 56307383 56307479 -47187495 + (TA)n Simple_repeat Simple_repeat 1 96 0 4 1014 293 303 118 62 chr15 56307536 56307747 -47187227 + RMER4A LTR ERVK 8 230 -236 4 1014 389 232 0 34 chr15 56307894 56307983 -47186991 - RSINE1 SINE B4 -68 97 12 4 1014 226 196 36 0 chr15 56309873 56309929 -47185045 + Lx8 LINE L1 7410 7467 -6 4 1014 217 229 21 0 chr15 56310022 56310070 -47184904 + (CAA)n Simple_repeat Simple_repeat 3 51 0 4 1014 380 288 61 12 chr15 56311869 56312034 -47182940 - MER121 Unknown Unknown -133 279 107 4 1014 721 105 41 14 chr15 56312441 56312586 -47182388 - RMER17B LTR ERVK -498 460 312 4 1014 333 0 0 0 chr15 56312597 56312634 -47182340 + (TTA)n Simple_repeat Simple_repeat 1 37 0 4 1014 280 355 77 34 chr15 56313042 56313249 -47181725 + MIR SINE MIR 22 237 -25 4 1014 3410 95 40 4 chr15 56313482 56313978 -47180996 - L1_Mus3 LINE L1 -6 6632 6119 4 1014 4872 94 3 1 chr15 56313978 56314992 -47179982 + L1_Mus3 LINE L1 5144 6515 -482 4 1014 1374 235 89 46 chr15 56315927 56316444 -47178530 + Lx7 LINE L1 276 814 -6914 4 1014 2026 193 11 25 chr15 56316445 56316880 -47178094 + Lx7 LINE L1 2531 2959 -2921 4 1014 3315 266 21 21 chr15 56316941 56317744 -47177230 + RMER1A Other Other 2 804 -226 4 1014 9251 191 49 87 chr15 56317777 56318310 -47176664 + Lx7 LINE L1 3047 3592 -2288 4 1014 3114 63 12 2 chr15 56318310 56318727 -47176247 + BGLII LTR ERVK 1 421 0 4 1014 9251 191 49 87 chr15 56318727 56320815 -47174159 + Lx7 LINE L1 3593 5569 -311 4 1014 1751 77 50 84 chr15 56320867 56321165 -47173809 + ORR1A3 LTR MaLR 5 292 -34 4 1014 247 241 0 0 chr15 56321171 56321225 -47173749 + Lx7 LINE L1 5925 5978 -1718 4 1014 398 235 8 16 chr15 56321249 56321370 -47173604 + Lx6 LINE L1 7341 7460 0 4 1014 251 54 27 0 chr15 56321620 56321657 -47173317 + (CAA)n Simple_repeat Simple_repeat 2 39 0 4 1014 308 362 52 16 chr15 56321691 56321882 -47173092 + L1MDa LINE L1 334 531 -6009 4 1014 1204 103 28 33 chr15 56322110 56322321 -47172653 - Lx3A LINE L1 -4 6977 6768 4 1014 237 326 33 11 chr15 56322429 56322519 -47172455 + PB1D10 SINE Alu 18 109 -8 4 1014 700 244 58 32 chr15 56322703 56323016 -47171958 + L1MDa LINE L1 1029 1349 -5191 4 1014 701 287 82 36 chr15 56322999 56323472 -47171502 + L1MDa LINE L1 1666 2160 -4473 4 1014 370 374 53 39 chr15 56323778 56324115 -47170859 + L1MDa LINE L1 2540 2881 -3656 4 1014 240 378 21 62 chr15 56324212 56324404 -47170570 - Tigger5 DNA MER2_type -2221 185 2 4 1014 382 355 29 11 chr15 56324487 56324763 -47170211 + L1MC LINE L1 2623 2903 -3243 4 1014 337 269 52 6 chr15 56324796 56324968 -47170006 + L1MDa LINE L1 3375 3554 -2983 4 1014 192 77 0 0 chr15 56325131 56325157 -47169817 + (TCTCTG)n Simple_repeat Simple_repeat 2 27 0 4 1014 246 256 0 35 chr15 56325166 56325217 -47169757 + polypyrimidine Low_complexity Low_complexity 35 83 0 4 1014 1064 62 7 0 chr15 56325217 56325362 -47169612 + (TCTA)n Simple_repeat Simple_repeat 1 146 0 4 1014 246 256 0 35 chr15 56325362 56325395 -47169579 + polypyrimidine Low_complexity Low_complexity 2 34 0 4 1014 450 380 28 0 chr15 56325395 56325537 -47169437 - RSINE1 SINE B4 0 165 20 4 1014 311 311 45 119 chr15 56325560 56325761 -47169213 - MLT2B4 LTR ERVL -357 199 14 4 1014 391 96 0 40 chr15 56325898 56325974 -47169000 + (TAAA)n Simple_repeat Simple_repeat 4 76 0 4 1014 1675 113 21 109 chr15 56326017 56326346 -47168628 + L1Md_F2 LINE L1 6283 6582 0 4 1014 1247 316 58 15 chr15 56326388 56326857 -47168117 + Lx6 LINE L1 6946 7434 -26 4 1014 1084 98 26 17 chr15 56327384 56327799 -47167175 + (TAGA)n Simple_repeat Simple_repeat 1 418 0 4 1014 610 63 21 10 chr15 56327818 56327914 -47167060 + (TAGA)n Simple_repeat Simple_repeat 2 98 0 4 1014 252 224 141 0 chr15 56328458 56328543 -47166431 + L1MD3 LINE L1 6578 6674 -1321 4 1014 294 143 0 0 chr15 56328578 56328627 -47166347 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 1014 560 345 10 45 chr15 56328629 56328829 -47166145 + B3A SINE B2 5 197 -1 4 1014 342 336 34 0 chr15 56329170 56329316 -47165658 - MIRb SINE MIR -4 264 114 4 1014 180 289 54 32 chr15 56330256 56330349 -47164625 - MIRc SINE MIR -13 255 161 4 1014 21 0 0 0 chr15 56331182 56331203 -47163771 + AT_rich Low_complexity Low_complexity 1 21 0 4 1014 645 347 71 26 chr15 56332552 56332647 -47162327 - Lx8 LINE L1 -143 7330 7231 4 1014 225 0 0 0 chr15 56332647 56332672 -47162302 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 1014 645 347 71 26 chr15 56332672 56332916 -47162058 - Lx8 LINE L1 -243 7230 6976 4 1014 4837 68 0 0 chr15 56333494 56334101 -47160873 - L1_Mus1 LINE L1 0 6567 5961 4 1014 330 374 65 0 chr15 56334323 56334462 -47160512 - MTEb LTR MaLR -75 304 157 4 1014 496 259 0 0 chr15 56334476 56334584 -47160390 - MTEb LTR MaLR -269 110 3 4 1014 204 40 0 0 chr15 56335231 56335256 -47159718 + (TC)n Simple_repeat Simple_repeat 1 25 0 4 1014 431 233 31 6 chr15 56335274 56335434 -47159540 + (TA)n Simple_repeat Simple_repeat 2 165 0 4 1014 418 325 61 65 chr15 56335697 56336172 -47158802 + Arthur1B DNA Tip100 526 998 -227 4 1014 2110 205 76 2 chr15 56336252 56336701 -47158273 + Lx7 LINE L1 6671 7152 -544 4 1014 219 371 37 32 chr15 56337119 56337336 -47157638 + L2 LINE L2 2775 2992 -427 4 1014 1734 291 31 31 chr15 56337624 56338244 -47156730 + Lx8 LINE L1 6790 7409 -64 4 1014 210 171 0 0 chr15 56338264 56338305 -47156669 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 4 1014 258 377 138 73 chr15 56338699 56338879 -47156095 + MLT1J2 LTR MaLR 83 264 -184 4 1014 2972 76 12 2 chr15 56338879 56339287 -47155687 + L1_Mus3 LINE L1 6217 6628 -10 4 1014 258 377 138 73 chr15 56339287 56339447 -47155527 + MLT1J2 LTR MaLR 265 445 -3 4 1014 30 0 0 0 chr15 56339598 56339628 -47155346 + AT_rich Low_complexity Low_complexity 1 30 0 4 1014 23 54 0 0 chr15 56339896 56339933 -47155041 + AT_rich Low_complexity Low_complexity 1 37 0 4 1014 473 141 12 0 chr15 56340467 56340552 -47154422 + (TA)n Simple_repeat Simple_repeat 2 87 0 4 1014 359 316 76 20 chr15 56340642 56340891 -47154083 - L1ME2 LINE L1 -10 6154 5892 4 1014 443 312 107 27 chr15 56340931 56341369 -47153605 - L1ME2 LINE L1 -421 5757 5285 4 1014 279 79 0 0 chr15 56341466 56341504 -47153470 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 4 1014 22 0 0 0 chr15 56341559 56341581 -47153393 + AT_rich Low_complexity Low_complexity 1 22 0 4 1014 2168 84 7 13 chr15 56341834 56342137 -47152837 - L1_Mus2 LINE L1 0 6566 6266 4 1014 2402 75 9 0 chr15 56342137 56342459 -47152515 + L1_Mus2 LINE L1 5851 6175 -391 4 1014 315 0 0 0 chr15 56342667 56342702 -47152272 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1014 334 119 0 38 chr15 56342706 56342787 -47152187 + MT2B2 LTR ERVL 456 584 0 4 1014 284 237 13 0 chr15 56342828 56342904 -47152070 + Lx7 LINE L1 7602 7678 -18 4 1014 1078 313 158 38 chr15 56342904 56343481 -47151493 + ORR1E-int LTR MaLR 879 1527 -53 4 1014 414 290 127 38 chr15 56343481 56343817 -47151157 + ORR1E LTR MaLR 3 379 0 4 1014 1000 277 99 109 chr15 56344790 56345014 -47149960 + MT2B LTR ERVL 1 193 -408 4 1014 2557 102 56 11 chr15 56345014 56345391 -47149583 - Lx3_Mus LINE L1 -5 7004 6611 4 1014 1000 277 99 109 chr15 56345391 56345773 -47149201 + MT2B LTR ERVL 194 601 0 4 1014 669 97 237 0 chr15 56346096 56346210 -47148764 + Lx LINE L1 6149 6289 -365 4 1014 1383 102 72 20 chr15 56346212 56346461 -47148513 + Lx LINE L1 6389 6650 -4 4 1014 378 0 0 0 chr15 56346686 56346728 -47148246 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1014 624 290 41 131 chr15 56348463 56348975 -47145999 + Lx9 LINE L1 6911 7376 -268 4 1014 279 328 100 26 chr15 56349039 56349250 -47145724 + Lx9 LINE L1 7285 7513 -131 4 1014 333 109 0 0 chr15 56349250 56349305 -47145669 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1014 279 328 100 26 chr15 56349305 56349403 -47145571 + Lx9 LINE L1 7514 7616 -28 4 1014 236 320 38 19 chr15 56349542 56349647 -47145327 - MIR SINE MIR -111 151 45 4 1014 1307 219 130 59 chr15 56350280 56350414 -47144560 - RLTR14 LTR ERV1 0 382 238 4 1014 2511 81 0 17 chr15 56350414 56350764 -47144210 + L1Md_F2 LINE L1 6227 6570 -12 4 1014 1307 219 130 59 chr15 56350764 56350984 -47143990 - RLTR14 LTR ERV1 -145 237 3 4 1014 2545 242 41 36 chr15 56351224 56352000 -47142974 + L1Md_F2 LINE L1 59 838 -6890 4 1014 35279 47 0 3 chr15 56351996 56357452 -47137522 + L1Md_T LINE L1 55 5589 -297 4 1014 8439 33 0 0 chr15 56357452 56358448 -47136526 + L1Md_T LINE L1 5590 6585 0 4 1014 3604 117 31 19 chr15 56358453 56359385 -47135589 + L1Md_F2 LINE L1 5092 5586 -297 4 1014 7983 45 4 13 chr15 56359385 56360423 -47134551 + L1Md_F2 LINE L1 5587 6582 0 4 1014 1191 119 6 0 chr15 56360451 56360628 -47134346 + B2_Mm1t SINE B2 2 179 -14 4 1014 425 77 0 0 chr15 56360678 56360743 -47134231 + B2_Mm1a SINE B2 127 191 -2 4 126 1315 180 31 31 chr15 56360824 56361116 -47133858 - RLTR11A2 LTR ERVK -228 299 8 4 1015 2199 221 71 6 chr15 56361150 56361617 -47133357 + Lx7 LINE L1 6759 7258 -438 4 1015 615 58 0 0 chr15 56361617 56361704 -47133270 + Lx2 LINE L1 6911 6997 0 4 1015 2199 221 71 6 chr15 56361704 56361769 -47133205 + Lx7 LINE L1 7259 7325 -371 4 1015 1060 181 35 114 chr15 56361926 56362268 -47132706 + Lx7 LINE L1 7382 7696 0 4 1015 1766 330 76 38 chr15 56364643 56365659 -47129315 - Lx8 LINE L1 -204 7440 6245 4 1015 34902 70 1 4 chr15 56365676 56371720 -47123254 - L1Md_F2 LINE L1 -14 6571 450 4 1015 23 54 0 0 chr15 56371962 56371999 -47122975 + AT_rich Low_complexity Low_complexity 1 37 0 4 1015 531 226 66 0 chr15 56371999 56372105 -47122869 + B1_Mur4 SINE Alu 3 115 -35 4 1015 948 117 0 0 chr15 56372111 56372256 -47122718 + (TCCC)n Simple_repeat Simple_repeat 4 148 0 4 1015 2536 186 19 94 chr15 56372302 56372986 -47121988 + L1_Mur3 LINE L1 3642 4274 -1603 4 1015 770 159 18 6 chr15 56373008 56373173 -47121801 + GA-rich Low_complexity Low_complexity 3 169 0 4 1015 536 42 0 14 chr15 56373174 56373246 -47121728 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 4 1015 5941 200 39 20 chr15 56373246 56374644 -47120330 + L1_Mur3 LINE L1 4287 5711 -169 4 1015 2275 68 0 3 chr15 56375479 56375776 -47119198 - L1_Mus2 LINE L1 0 6566 6271 4 1015 567 85 0 0 chr15 56375793 56375875 -47119099 + (TG)n Simple_repeat Simple_repeat 1 82 0 4 1015 21 0 0 0 chr15 56376300 56376321 -47118653 + AT_rich Low_complexity Low_complexity 1 21 0 4 1015 21 36 0 0 chr15 56377170 56377198 -47117776 + AT_rich Low_complexity Low_complexity 1 28 0 4 1015 431 281 92 8 chr15 56377200 56377440 -47117534 + L1M3 LINE L1 4178 4437 -1703 4 1015 2866 195 128 34 chr15 56377445 56378555 -47116419 + L1_Mur1 LINE L1 208 1422 -4464 4 1015 32121 79 8 1 chr15 56378563 56383985 -47110989 + L1Md_F2 LINE L1 128 5586 -297 4 1015 7588 61 5 6 chr15 56383985 56384982 -47109992 + L1Md_F2 LINE L1 5587 6582 0 4 1015 27 29 0 0 chr15 56384982 56385016 -47109958 + AT_rich Low_complexity Low_complexity 1 34 0 5 1015 280 310 26 0 chr15 56385017 56385130 -47109844 + L1MA9 LINE L1 6159 6274 -38 5 1015 292 310 109 25 chr15 56385532 56385651 -47109323 - MLT1H LTR MaLR -259 290 162 5 1015 725 350 52 11 chr15 56386545 56386985 -47107989 + Lx9 LINE L1 7038 7495 -149 5 1015 286 195 0 22 chr15 56387400 56387489 -47107485 + (CATA)n Simple_repeat Simple_repeat 4 90 0 5 1015 21 36 0 0 chr15 56388133 56388161 -47106813 + AT_rich Low_complexity Low_complexity 1 28 0 5 1015 320 248 57 24 chr15 56389345 56389469 -47105505 + Lx4B LINE L1 6923 7050 -8 5 1015 243 0 0 0 chr15 56390234 56390261 -47104713 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1015 347 349 68 8 chr15 56390351 56390484 -47104490 + B1F1 SINE Alu 4 144 -5 5 1015 1743 203 36 86 chr15 56391051 56391471 -47103503 - RMER4A LTR ERVK -38 428 30 5 1015 3845 50 0 8 chr15 56391474 56391957 -47103017 + L1Md_F2 LINE L1 6100 6578 -4 5 1015 292 287 21 21 chr15 56392019 56392115 -47102859 - Lx8 LINE L1 -538 6935 6840 5 1015 399 290 192 29 chr15 56392155 56392400 -47102574 + Lx8 LINE L1 7154 7438 -35 5 1015 211 234 0 21 chr15 56392973 56393021 -47101953 + (TATG)n Simple_repeat Simple_repeat 4 50 0 5 1015 203 348 86 9 chr15 56393910 56394026 -47100948 + MIR SINE MIR 10 134 -128 5 1015 400 205 0 0 chr15 56396342 56396425 -47098549 - RMER1B Other Other -15 1051 969 5 1015 573 132 113 24 chr15 56396425 56396549 -47098425 + RMER1B Other Other 779 913 -153 5 1015 202 213 0 0 chr15 56396632 56396679 -47098295 + T-rich Low_complexity Low_complexity 2 48 0 5 1015 542 328 46 21 chr15 56396896 56397176 -47097798 - Lx8 LINE L1 -183 7290 7004 5 1015 510 17 0 0 chr15 56397184 56397243 -47097731 + (GA)n Simple_repeat Simple_repeat 2 60 0 5 1015 25 65 0 0 chr15 56398209 56398255 -47096719 + AT_rich Low_complexity Low_complexity 1 46 0 5 1015 651 226 0 14 chr15 56399061 56399201 -47095773 + B1_Mur1 SINE Alu 9 143 -5 5 1015 1666 184 12 15 chr15 56399459 56399785 -47095189 - ORR1A4 LTR MaLR -4 325 1 5 1015 3056 204 92 97 chr15 56399785 56401377 -47093597 - ORR1A4-int LTR MaLR 0 1509 1 5 1015 2101 134 3 15 chr15 56401377 56401710 -47093264 - ORR1A4 LTR MaLR 0 329 1 5 1015 3718 87 6 0 chr15 56401855 56402348 -47092626 + L1_Mus1 LINE L1 6071 6566 -1 5 1015 742 149 216 0 chr15 56403939 56404087 -47090887 + URR1B DNA MER1_type 7 186 -39 5 1015 2587 240 58 36 chr15 56404401 56405045 -47089929 + L1_Mur3 LINE L1 340 1006 -6722 5 1015 207 0 0 0 chr15 56405045 56405068 -47089906 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1015 2587 240 58 36 chr15 56405068 56405258 -47089716 + L1_Mur3 LINE L1 1007 1192 -6536 5 1015 1607 15 10 0 chr15 56405256 56405458 -47089516 - L1Md_F3 LINE L1 -639 5945 5742 5 1015 5302 31 5 8 chr15 56405458 56406103 -47088871 + L1Md_F3 LINE L1 5942 6584 0 5 1015 445 190 67 7 chr15 56406103 56406268 -47088706 + L1_Mur3 LINE L1 1182 1363 -4517 5 1015 2815 235 65 40 chr15 56406271 56406531 -47088443 - Lx6 LINE L1 -484 6976 6736 5 1015 651 88 0 0 chr15 56406531 56406622 -47088352 + (CA)n Simple_repeat Simple_repeat 2 92 0 5 1015 2815 235 65 40 chr15 56406622 56407145 -47087829 - Lx6 LINE L1 -725 6735 6173 5 1015 2304 209 23 10 chr15 56407154 56407677 -47087297 - Lx4B LINE L1 -4 7054 6525 5 1015 2193 201 77 28 chr15 56407683 56408499 -47086475 - Lx6 LINE L1 -1302 6158 5302 5 1015 3507 175 12 46 chr15 56408491 56409014 -47085960 - L1_Mus3 LINE L1 -64 5819 5297 5 1015 5330 109 10 24 chr15 56409014 56409819 -47085155 + L1_Mus3 LINE L1 5845 6638 0 5 1015 3507 175 12 46 chr15 56409819 56410050 -47084924 - L1_Mm LINE L1 -587 5296 5091 5 1015 670 143 13 39 chr15 56410066 56410219 -47084755 + Lx LINE L1 6506 6654 0 5 1015 274 344 128 0 chr15 56410792 56410917 -47084057 + L2a LINE L2 3286 3426 0 5 1015 223 286 16 16 chr15 56411055 56411119 -47083855 - MIRm SINE MIR -121 155 92 5 1015 21 0 0 0 chr15 56411931 56411952 -47083022 + AT_rich Low_complexity Low_complexity 1 21 0 5 1015 353 353 9 57 chr15 56412075 56412129 -47082845 - Lx8 LINE L1 -93 7380 7328 5 1015 500 45 15 0 chr15 56412129 56412196 -47082778 + (CA)n Simple_repeat Simple_repeat 2 69 0 5 1015 353 353 9 57 chr15 56412196 56412369 -47082605 - Lx8 LINE L1 -146 7327 7164 5 1015 180 0 0 0 chr15 56413787 56413807 -47081167 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 5 1015 34720 61 3 6 chr15 56415366 56421311 -47073663 + L1Md_F2 LINE L1 631 6551 -31 5 1015 2167 0 0 0 chr15 56421308 56421557 -47073417 - L1Md_A LINE L1 -57 5826 5578 5 1015 6807 3 0 0 chr15 56421557 56422306 -47072668 + L1Md_A LINE L1 5834 6582 0 5 1015 263 180 0 33 chr15 56422334 56422426 -47072548 + A-rich Low_complexity Low_complexity 1 89 0 5 1015 4515 58 2 0 chr15 56422426 56423025 -47071949 + L1Md_F3 LINE L1 4987 5586 -297 5 1015 7288 76 4 13 chr15 56423026 56424018 -47070956 + L1Md_F3 LINE L1 5588 6570 -14 5 1015 1076 175 31 36 chr15 56424704 56424929 -47070045 - URR1B DNA MER1_type 0 225 2 5 1015 7502 70 2 7 chr15 56426130 56427174 -47067800 + L1Md_F2 LINE L1 4548 5586 -297 5 1015 7111 59 64 3 chr15 56427175 56428113 -47066861 + L1Md_F2 LINE L1 5588 6582 0 5 1015 289 333 83 6 chr15 56428130 56428287 -47066687 - MLT1D LTR MaLR -136 369 201 5 1015 2344 69 119 11 chr15 56428733 56429085 -47065889 + RLTR10 LTR ERVK 1 390 0 5 1015 332 60 40 0 chr15 56429129 56429179 -47065795 + (CAAAA)n Simple_repeat Simple_repeat 1 52 0 5 1015 698 261 27 32 chr15 56429568 56429754 -47065220 + B3A SINE B2 13 197 -1 5 1015 265 310 104 14 chr15 56429885 56430173 -47064801 - L1M2 LINE L1 -3198 2945 2632 5 1015 2385 73 0 6 chr15 56430298 56430616 -47064358 + L1_Mus2 LINE L1 6250 6565 -1 5 1015 21 0 0 0 chr15 56430616 56430637 -47064337 + AT_rich Low_complexity Low_complexity 1 21 0 5 1015 208 214 0 0 chr15 56430689 56430731 -47064243 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1015 446 306 88 31 chr15 56430822 56431139 -47063835 + L1MA4 LINE L1 5550 5884 -416 5 1015 724 273 60 31 chr15 56432187 56432296 -47062678 - Lx9 LINE L1 -2 7642 7520 5 1015 548 53 63 0 chr15 56432296 56432391 -47062583 + (TAGA)n Simple_repeat Simple_repeat 1 101 0 5 1015 724 273 60 31 chr15 56432391 56432666 -47062308 - Lx9 LINE L1 -125 7519 7247 5 1015 774 195 119 42 chr15 56432954 56433319 -47061655 - RMER17B LTR ERVK -519 439 19 5 1015 294 299 13 19 chr15 56433322 56433479 -47061495 - L1_Rod LINE L1 -4469 1378 1223 5 1015 403 308 198 0 chr15 56434593 56434765 -47060209 - B3 SINE B2 -9 207 2 5 1015 3435 181 25 21 chr15 56434794 56435467 -47059507 - Lx4B LINE L1 -14 7044 6369 5 1015 671 194 61 15 chr15 56435468 56435599 -47059375 - B1_Mur1 SINE Alu -3 146 10 5 1015 462 271 123 73 chr15 56435475 56435654 -47059320 - B4 SINE B4 -74 218 31 5 1015 1249 27 7 0 chr15 56435655 56435802 -47059172 + B1_Mus1 SINE Alu 1 148 0 5 1015 204 97 0 0 chr15 56435805 56435836 -47059138 + (GAAA)n Simple_repeat Simple_repeat 3 33 0 5 1015 252 319 114 9 chr15 56436387 56436501 -47058473 + MTEb LTR MaLR 254 379 0 5 1015 279 328 77 103 chr15 56436625 56436819 -47058155 - MER5A DNA MER1_type 0 189 1 5 1015 1146 315 48 8 chr15 56437783 56438257 -47056717 + Lx9 LINE L1 6473 6965 -679 5 1015 477 364 25 30 chr15 56438292 56438691 -47056283 + Lx9 LINE L1 7058 7454 -190 5 1015 450 0 0 0 chr15 56438691 56438741 -47056233 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1015 375 23 0 0 chr15 56439057 56439101 -47055873 + (TTG)n Simple_repeat Simple_repeat 2 45 0 5 1015 409 271 87 35 chr15 56441037 56441209 -47053765 - MIR SINE MIR -52 210 30 5 1015 26 30 0 0 chr15 56441490 56441523 -47053451 + AT_rich Low_complexity Low_complexity 1 33 0 5 1015 22 80 0 0 chr15 56441581 56441631 -47053343 + AT_rich Low_complexity Low_complexity 1 50 0 5 1015 4632 111 22 17 chr15 56442360 56443082 -47051892 - Lx LINE L1 -2 6652 5927 5 1015 1772 93 11 4 chr15 56443082 56443352 -47051622 + L1_Mus4 LINE L1 5757 6028 -608 5 1015 289 317 24 14 chr15 56443990 56444096 -47050878 - MIRb SINE MIR -149 119 12 5 1015 21 0 0 0 chr15 56444302 56444323 -47050651 + AT_rich Low_complexity Low_complexity 1 21 0 5 1015 226 310 0 0 chr15 56444503 56444561 -47050413 + ID_B1 SINE B4 161 218 -6 5 1015 252 163 0 0 chr15 56446311 56446354 -47048620 - URR1B DNA MER1_type -7 218 176 5 1015 276 222 14 27 chr15 56446431 56446505 -47048469 + (CATATA)n Simple_repeat Simple_repeat 4 76 0 5 1015 250 287 50 84 chr15 56446835 56447014 -47047960 - L1MC3 LINE L1 -21 7764 7592 5 1015 248 328 50 41 chr15 56448353 56448474 -47046500 - MIR SINE MIR -34 228 107 5 1015 363 336 114 0 chr15 56448546 56448677 -47046297 + RSINE1 SINE B4 13 158 -7 5 1015 324 0 0 0 chr15 56448679 56448715 -47046259 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1015 1032 315 23 46 chr15 56448716 56449198 -47045776 + Lx8 LINE L1 6842 7312 -161 5 1015 616 87 9 19 chr15 56449201 56449307 -47045667 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 5 1015 235 310 23 128 chr15 56449737 56449870 -47045104 + B3A SINE B2 1 119 -79 5 1015 477 0 0 0 chr15 56450091 56450144 -47044830 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1015 561 30 0 0 chr15 56450152 56450219 -47044755 + (GA)n Simple_repeat Simple_repeat 2 68 0 5 1015 367 254 114 16 chr15 56452125 56452309 -47042665 - Lx8 LINE L1 -38 7435 7234 5 1015 918 28 0 0 chr15 56452315 56452424 -47042550 + (TC)n Simple_repeat Simple_repeat 1 109 0 5 1015 268 313 24 0 chr15 56453230 56453313 -47041661 + B4A SINE B4 1 85 -207 5 1015 468 284 197 11 chr15 56453816 56453994 -47040980 + ID_B1 SINE B4 14 224 0 5 1015 216 0 0 0 chr15 56454214 56454238 -47040736 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1015 292 280 18 36 chr15 56454256 56454367 -47040607 + (CATA)n Simple_repeat Simple_repeat 3 111 0 5 1015 613 287 25 81 chr15 56454492 56454689 -47040285 + B3A SINE B2 8 193 -5 5 1015 435 209 0 0 chr15 56457079 56457184 -47037790 + (CA)n Simple_repeat Simple_repeat 2 106 0 5 1015 291 28 0 0 chr15 56458241 56458277 -47036697 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1015 378 0 0 0 chr15 56458277 56458318 -47036656 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1015 25 31 0 0 chr15 56458419 56458451 -47036523 + AT_rich Low_complexity Low_complexity 1 32 0 5 1015 286 234 12 38 chr15 56458528 56458608 -47036366 + URR1B DNA MER1_type 143 220 -5 5 1015 195 42 0 0 chr15 56459632 56459656 -47035318 + (TA)n Simple_repeat Simple_repeat 2 25 0 6 1015 1177 75 0 0 chr15 56459962 56460108 -47034866 + B1_Mus2 SINE Alu 2 147 0 6 1015 239 109 0 52 chr15 56460108 56460166 -47034808 + A-rich Low_complexity Low_complexity 1 55 0 6 1015 4134 62 0 18 chr15 56460627 56461170 -47033804 - L1Md_F2 LINE L1 -6 6576 6044 6 1015 191 133 0 22 chr15 56462159 56462205 -47032769 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 6 1015 225 0 0 0 chr15 56462224 56462249 -47032725 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1015 546 16 0 0 chr15 56462543 56462606 -47032368 + (TG)n Simple_repeat Simple_repeat 1 63 0 6 1015 288 70 0 0 chr15 56462606 56462649 -47032325 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1015 313 316 126 49 chr15 56462658 56462801 -47032173 - L1MEc LINE L1 -6211 189 36 6 1015 183 80 0 0 chr15 56463596 56463621 -47031353 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 6 1015 2965 53 11 0 chr15 56463740 56464115 -47030859 - L1_Mus2 LINE L1 0 6566 6188 6 1015 372 279 13 0 chr15 56464578 56464657 -47030317 + RSINE1 SINE B4 48 127 -38 6 1015 226 272 68 34 chr15 56464675 56464793 -47030181 + LSU-rRNA_Hsa rRNA rRNA 3011 3132 -1903 6 1015 319 354 7 0 chr15 56464928 56465075 -47029899 - L1M6 LINE L1 -5606 890 743 6 1015 371 354 41 5 chr15 56465829 56466025 -47028949 - L3 LINE CR1 -511 3978 3776 6 1015 360 0 0 0 chr15 56466556 56466596 -47028378 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1015 331 271 49 175 chr15 56467001 56467184 -47027790 + Lx8 LINE L1 6988 7147 -326 6 1015 23 0 0 0 chr15 56467208 56467231 -47027743 + AT_rich Low_complexity Low_complexity 1 23 0 6 1015 887 271 65 75 chr15 56467275 56467785 -47027189 - RLTR16 LTR ERVK 0 505 1 6 1015 3099 11 0 0 chr15 56467835 56468185 -47026789 + L1Md_A LINE L1 6233 6582 0 6 1015 1357 358 33 31 chr15 56468410 56468943 -47026031 - Lx8 LINE L1 -235 7238 6701 6 1015 186 43 0 0 chr15 56468943 56468966 -47026008 + (TTA)n Simple_repeat Simple_repeat 3 25 0 6 1015 1357 358 33 31 chr15 56468966 56469194 -47025780 - Lx8 LINE L1 -773 6700 6477 6 1015 241 284 74 0 chr15 56469686 56469767 -47025207 - MLT1J1 LTR MaLR -357 87 1 6 1015 21 57 0 0 chr15 56470038 56470073 -47024901 + AT_rich Low_complexity Low_complexity 1 35 0 6 1015 1855 116 10 23 chr15 56470243 56470553 -47024421 - Lx4A LINE L1 -1144 5914 5609 6 1015 6475 166 19 12 chr15 56470556 56471675 -47023299 + Lx4A LINE L1 5933 7058 0 6 1015 315 329 33 7 chr15 56472150 56472303 -47022671 - L1MC4a LINE L1 -2 7880 7724 6 1015 27699 96 43 12 chr15 56472507 56474152 -47020822 + Lx3A LINE L1 811 2645 -3241 6 1015 4500 157 24 73 chr15 56474152 56475100 -47019874 + RLTR13D6 LTR ERVK 1 902 0 6 1015 27699 92 55 13 chr15 56475100 56478347 -47016627 + Lx3A LINE L1 2646 5909 -1072 6 1015 381 43 0 0 chr15 56478347 56478394 -47016580 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1015 7728 114 59 18 chr15 56478394 56478650 -47016324 + Lx3A LINE L1 5910 6166 -815 6 1015 2386 154 57 48 chr15 56478650 56479092 -47015882 + RLTR41 LTR ERV1 1 446 0 6 1015 7728 114 59 18 chr15 56479092 56479878 -47015096 + Lx3A LINE L1 6167 6979 -2 6 1015 25 0 0 0 chr15 56479949 56479974 -47015000 + AT_rich Low_complexity Low_complexity 1 25 0 6 1015 574 340 20 0 chr15 56480002 56480149 -47014825 - B3A SINE B2 -24 174 25 6 1015 378 0 0 0 chr15 56480203 56480245 -47014729 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1015 299 351 0 35 chr15 56481174 56481289 -47013685 - MLT1C LTR MaLR -37 430 320 6 1015 270 0 0 0 chr15 56481336 56481366 -47013608 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6 1015 1130 68 7 0 chr15 56481479 56481625 -47013349 + B1_Mm SINE Alu 1 147 0 6 1015 4114 245 70 76 chr15 56482618 56482646 -47012328 - Lx5 LINE L1 -40 7010 6978 6 1015 537 58 0 0 chr15 56482646 56482715 -47012259 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 1015 4114 228 55 63 chr15 56482715 56484240 -47010734 - Lx5 LINE L1 -73 6977 5462 6 1015 791 215 31 52 chr15 56484266 56484645 -47010329 + Lx4B LINE L1 6606 7051 -7 6 1015 219 69 0 0 chr15 56484744 56484773 -47010201 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 1015 540 308 44 19 chr15 56484774 56484979 -47009995 - ID_B1 SINE B4 -14 210 1 6 1015 853 220 91 161 chr15 56485037 56485465 -47009509 - RMER4A LTR ERVK -15 451 54 6 1015 549 0 0 0 chr15 56485510 56485571 -47009403 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 1015 867 75 0 0 chr15 56485571 56485703 -47009271 + (GA)n Simple_repeat Simple_repeat 1 133 0 6 1015 307 374 21 7 chr15 56486390 56486530 -47008444 - MIR SINE MIR -113 149 8 6 1015 25 0 0 0 chr15 56487798 56487823 -47007151 + AT_rich Low_complexity Low_complexity 1 25 0 6 1015 1106 83 0 7 chr15 56488363 56488509 -47006465 - B1_Mm SINE Alu 0 147 3 6 1015 342 0 0 0 chr15 56488557 56488595 -47006379 + (TTTC)n Simple_repeat Simple_repeat 2 39 0 6 1015 423 335 133 35 chr15 56489269 56489381 -47005593 + L1MD2 LINE L1 6012 6134 -225 6 1015 342 45 0 0 chr15 56489381 56489425 -47005549 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1015 423 335 133 35 chr15 56489425 56489627 -47005347 + L1MD2 LINE L1 6135 6356 -3 6 1015 22 56 0 0 chr15 56489702 56489738 -47005236 + AT_rich Low_complexity Low_complexity 1 36 0 6 1015 375 89 0 0 chr15 56489806 56489862 -47005112 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 1015 206 279 16 0 chr15 56490048 56490109 -47004865 + (TTA)n Simple_repeat Simple_repeat 2 63 0 6 1015 545 87 0 11 chr15 56490732 56490825 -47004149 + L1_Mus2 LINE L1 6475 6566 0 6 1016 235 314 125 17 chr15 56493142 56493262 -47001712 - LTR81B LTR ERV1? -726 667 535 6 1016 832 270 92 47 chr15 56493833 56494234 -47000740 + Lx9 LINE L1 7014 7432 -212 6 1016 423 0 0 0 chr15 56494263 56494310 -47000664 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1016 211 277 0 0 chr15 56494383 56494430 -47000544 + GA-rich Low_complexity Low_complexity 4 50 0 6 1016 30 0 0 0 chr15 56494441 56494471 -47000503 + AT_rich Low_complexity Low_complexity 1 30 0 6 1016 351 342 156 42 chr15 56494589 56494967 -47000007 - L2a LINE L2 -8 3418 2998 6 1016 828 329 95 10 chr15 56495729 56496024 -46998950 + MTEb LTR MaLR 12 331 -48 6 1016 181 203 62 0 chr15 56496026 56496090 -46998884 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 6 1016 216 0 0 0 chr15 56498556 56498580 -46996394 + (TA)n Simple_repeat Simple_repeat 1 24 0 6 1016 303 28 0 0 chr15 56499153 56499189 -46995785 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1016 673 299 45 15 chr15 56500915 56501115 -46993859 - B3 SINE B2 -3 213 8 1 1016 353 207 67 22 chr15 56501910 56501999 -46992975 + MLT1A1 LTR MaLR 304 396 -12 2 1016 565 308 95 86 chr15 56502126 56502464 -46992510 + ORR1E LTR MaLR 2 342 -17 3 1016 22 56 0 0 chr15 56502998 56503034 -46991940 + AT_rich Low_complexity Low_complexity 1 36 0 4 1016 21 0 0 0 chr15 56504214 56504235 -46990739 + AT_rich Low_complexity Low_complexity 1 21 0 5 1016 484 284 54 24 chr15 56504367 56504533 -46990441 + MER58B DNA MER1_type 2 172 -169 6 1016 1656 21 0 0 chr15 56504744 56504932 -46990042 - B2_Mm1t SINE B2 -4 189 2 7 1016 834 248 67 12 chr15 56505101 56505354 -46989620 - Lx4B LINE L1 -2 7056 6790 8 1016 2211 124 8 11 chr15 56505352 56505727 -46989247 + L1_Mur2 LINE L1 4984 5357 -520 9 1016 1005 86 25 0 chr15 56506754 56506916 -46988058 + (TAGA)n Simple_repeat Simple_repeat 3 168 0 1 1016 441 0 0 0 chr15 56506918 56506967 -46988007 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 1016 458 239 73 9 chr15 56507869 56507979 -46986995 - PB1D10 SINE Alu 0 117 1 1 1016 362 57 19 0 chr15 56508017 56508070 -46986904 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1016 595 279 25 6 chr15 56508115 56508277 -46986697 - B4A SINE B4 -2 290 126 1 1016 319 258 91 8 chr15 56509062 56509183 -46985791 + MER82 DNA MER2_type 140 270 -383 1 1016 2753 103 100 0 chr15 56509244 56509692 -46985282 - Lx3B LINE L1 -354 6619 6127 1 1016 1416 132 30 49 chr15 56509692 56509956 -46985018 + Lx3B LINE L1 6711 6969 -4 1 1016 273 304 161 15 chr15 56509988 56510125 -46984849 + MER82 DNA MER2_type 363 519 -134 1 1016 214 297 152 17 chr15 56511938 56512116 -46982858 - MIRb SINE MIR -49 219 18 1 1016 441 0 0 0 chr15 56512729 56512778 -46982196 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1016 364 250 258 45 chr15 56513895 56514014 -46980960 - Lx8 LINE L1 -2 7471 7356 1 1016 279 0 0 0 chr15 56514014 56514045 -46980929 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1016 364 250 258 45 chr15 56514045 56514189 -46980785 - Lx8 LINE L1 -118 7355 7152 1 1016 215 338 0 0 chr15 56515057 56515128 -46979846 + (TG)n Simple_repeat Simple_repeat 1 71 0 2 1016 285 29 0 0 chr15 56515176 56515210 -46979764 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 2 1016 21 0 0 0 chr15 56515395 56515416 -46979558 + AT_rich Low_complexity Low_complexity 1 21 0 2 1016 3311 71 2 15 chr15 56515457 56515914 -46979060 - L1Md_F3 LINE L1 -1 6583 6133 2 1016 414 206 40 0 chr15 56516555 56516681 -46978293 + (CATATA)n Simple_repeat Simple_repeat 1 131 0 2 1016 342 36 0 51 chr15 56517647 56517706 -46977268 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1016 846 107 0 33 chr15 56517728 56517911 -46977063 + (TG)n Simple_repeat Simple_repeat 2 178 0 2 1016 307 75 0 131 chr15 56517911 56517964 -46977010 - HAL1-3A_ME LINE L1 -838 2020 1975 2 1016 693 119 0 70 chr15 56517966 56518282 -46976692 + (TG)n Simple_repeat Simple_repeat 1 293 0 2 1016 315 83 0 59 chr15 56518341 56518392 -46976582 - HAL1-3A_ME LINE L1 -845 2013 1966 2 1016 500 16 0 30 chr15 56518763 56518829 -46976145 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 2 1016 3344 35 2 2 chr15 56518829 56519224 -46975750 + MTA_Mm LTR MaLR 2 396 0 3 1016 1018 110 12 0 chr15 56519224 56519388 -46975586 + (TCTA)n Simple_repeat Simple_repeat 2 167 0 3 1016 197 361 43 61 chr15 56520698 56520813 -46974161 + MIRb SINE MIR 29 141 -127 3 1016 215 374 10 10 chr15 56520787 56520887 -46974087 + MIR SINE MIR 49 148 -114 3 1016 1092 78 14 0 chr15 56521148 56521290 -46973684 + B1_Mm SINE Alu 2 145 -2 3 1016 21 36 0 0 chr15 56523276 56523304 -46971670 + AT_rich Low_complexity Low_complexity 1 28 0 3 1016 22 0 0 0 chr15 56523480 56523502 -46971472 + AT_rich Low_complexity Low_complexity 1 22 0 3 1016 280 284 9 35 chr15 56526128 56526241 -46968733 + G-rich Low_complexity Low_complexity 1 110 0 3 1016 314 45 23 0 chr15 56526536 56526580 -46968394 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1016 333 0 0 0 chr15 56527001 56527038 -46967936 + (T)n Simple_repeat Simple_repeat 1 37 0 3 1016 183 42 0 0 chr15 56528676 56528700 -46966274 + (CAG)n Simple_repeat Simple_repeat 1 24 0 4 1016 1120 56 0 0 chr15 56529001 56529143 -46965831 + B1_Mus1 SINE Alu 6 147 -1 4 1016 547 262 45 80 chr15 56529006 56529205 -46965769 + B4 SINE B4 95 286 -6 4 1016 282 335 52 7 chr15 56529163 56529316 -46965658 - Charlie1a DNA MER1_type -1066 389 230 4 1016 1147 75 0 0 chr15 56529788 56529935 -46965039 + B1_Mus1 SINE Alu 1 147 -1 4 1016 277 328 26 9 chr15 56531026 56531140 -46963834 + PB1D10 SINE Alu 1 116 -1 4 1016 432 279 139 6 chr15 56531290 56531337 -46963637 - B3A SINE B2 0 198 152 4 1016 378 0 0 0 chr15 56531337 56531379 -46963595 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1016 432 279 139 6 chr15 56531379 56531504 -46963470 - B3A SINE B2 -47 151 4 4 1016 292 319 120 25 chr15 56533799 56533968 -46961006 + MIRb SINE MIR 1 177 -31 4 1016 202 200 0 0 chr15 56534664 56534699 -46960275 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1016 415 322 34 34 chr15 56535068 56535216 -46959758 + RSINE1 SINE B4 2 149 -16 5 1016 480 18 0 0 chr15 56535216 56535273 -46959701 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 1016 192 97 0 0 chr15 56535294 56535325 -46959649 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 5 1016 267 293 40 20 chr15 56535556 56535657 -46959317 - PB1D7 SINE Alu -13 107 5 5 1016 712 285 55 26 chr15 56535902 56536136 -46958838 + ORR1E LTR MaLR 1 229 -155 5 1016 342 115 0 0 chr15 56536447 56536499 -46958475 + (T)n Simple_repeat Simple_repeat 1 52 0 5 1016 1030 95 0 45 chr15 56536499 56536654 -46958320 - B1_Mus1 SINE Alu 0 148 1 5 1016 744 68 16 25 chr15 56536809 56536930 -46958044 + (TAGA)n Simple_repeat Simple_repeat 3 122 0 5 1016 432 0 0 0 chr15 56537246 56537294 -46957680 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1016 357 285 143 31 chr15 56538129 56538451 -46956523 - L1MDa LINE L1 -3104 3433 3076 5 1016 284 120 20 0 chr15 56538519 56538569 -46956405 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 6 1016 251 335 88 0 chr15 56538569 56538784 -46956190 - L1MDa LINE L1 -3594 2943 2710 5 1016 342 0 0 0 chr15 56538845 56538883 -46956091 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1016 465 299 113 18 chr15 56539056 56539552 -46955422 - L1M3 LINE L1 -866 5425 4870 6 1016 24 32 0 0 chr15 56539571 56539602 -46955372 + AT_rich Low_complexity Low_complexity 1 31 0 6 1016 937 263 13 161 chr15 56539623 56540089 -46954885 - RLTR11B LTR ERVK -41 412 16 6 1016 408 271 151 42 chr15 56540098 56540310 -46954664 - L1M3 LINE L1 -1256 4887 4653 6 1016 377 77 31 0 chr15 56540431 56540496 -46954478 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 6 1016 1272 284 109 18 chr15 56540647 56541561 -46953413 - L1M3 LINE L1 -2094 4046 3049 6 1016 1054 0 16 0 chr15 56541628 56541754 -46953220 + (TG)n Simple_repeat Simple_repeat 1 128 0 6 1016 353 293 52 38 chr15 56541756 56541969 -46953005 - L1M3 LINE L1 -3321 2819 2604 6 1016 260 272 35 47 chr15 56542022 56542107 -46952867 - B1F2 SINE Alu -63 86 3 6 1016 229 272 203 23 chr15 56542347 56542524 -46952450 - L1MDa LINE L1 -5510 1123 915 5 1016 477 331 95 68 chr15 56542738 56543107 -46951867 - L1MDa LINE L1 -5983 650 272 5 1016 272 272 65 37 chr15 56543179 56543286 -46951688 - L1MDa LINE L1 -6502 131 22 5 1016 839 258 19 5 chr15 56543317 56543527 -46951447 - B3 SINE B2 0 216 4 6 1016 453 52 0 125 chr15 56543845 56543933 -46951041 - Lx LINE L1 -269 6385 6309 6 1016 1226 133 49 0 chr15 56543933 56544136 -46950838 + Lx LINE L1 6436 6648 -6 6 1016 378 61 0 0 chr15 56544153 56544202 -46950772 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1016 297 0 0 0 chr15 56544699 56544732 -46950242 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1016 1652 36 0 0 chr15 56545698 56545891 -46949083 + B2_Mm1t SINE B2 1 193 0 7 1016 204 40 0 0 chr15 56545891 56545916 -46949058 + (A)n Simple_repeat Simple_repeat 1 25 0 7 1016 669 286 61 50 chr15 56546844 56547105 -46947869 + MTE2a LTR MaLR 73 336 -43 7 1016 663 317 33 8 chr15 56547183 56547428 -46947546 - RCHARR1 DNA MER1_type -562 412 162 7 1016 852 236 44 135 chr15 56547434 56547752 -46947222 + B4A SINE B4 1 289 -3 7 1016 330 26 0 0 chr15 56547759 56547798 -46947176 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1016 575 117 10 0 chr15 56547798 56547901 -46947073 + (GA)n Simple_repeat Simple_repeat 1 104 0 7 1016 1121 66 0 0 chr15 56548168 56548304 -46946670 + B1_Mus1 SINE Alu 5 140 -8 7 1016 972 70 0 0 chr15 56548308 56548437 -46946537 + (TAAAA)n Simple_repeat Simple_repeat 2 130 0 8 1016 189 0 0 0 chr15 56549785 56549806 -46945168 + (TTG)n Simple_repeat Simple_repeat 1 21 0 8 1016 330 247 0 0 chr15 56550086 56550167 -46944807 - MER57A-int LTR ERV1 -290 5897 5817 8 1016 195 258 0 96 chr15 56550219 56550292 -46944682 - MIRc SINE MIR -110 158 93 8 1016 537 16 0 0 chr15 56550331 56550393 -46944581 + (TTCC)n Simple_repeat Simple_repeat 4 65 0 8 1016 306 73 0 0 chr15 56550393 56550434 -46944540 + (TC)n Simple_repeat Simple_repeat 1 41 0 8 1016 978 142 0 0 chr15 56550438 56550586 -46944388 - B1_Mus1 SINE Alu 0 148 1 8 1016 279 0 0 0 chr15 56551414 56551445 -46943529 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 1016 579 316 15 0 chr15 56551445 56551581 -46943393 - RSINE1 SINE B4 -26 139 2 8 1016 354 346 71 124 chr15 56553749 56554128 -46940846 - ORR1E LTR MaLR 0 359 1 8 1016 322 268 0 0 chr15 56554738 56554809 -46940165 - ID4_ SINE ID -3 80 10 9 1016 348 24 0 0 chr15 56554925 56554966 -46940008 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 1016 205 0 54 54 chr15 56555783 56555820 -46939154 + (TTTTTA)n Simple_repeat Simple_repeat 2 38 0 9 1016 1222 41 0 13 chr15 56555824 56555973 -46939001 - B1_Mm SINE Alu 0 147 1 9 1016 240 336 134 25 chr15 56556094 56556213 -46938761 - ID_B1 SINE B4 -3 221 90 9 1016 2883 80 5 36 chr15 56556449 56556862 -46938112 - MTB LTR MaLR 0 400 1 9 1016 183 156 0 0 chr15 56556939 56556971 -46938003 + (TATG)n Simple_repeat Simple_repeat 1 32 0 9 1016 331 316 51 0 chr15 56556973 56557071 -46937903 - PB1D10 SINE Alu -1 116 14 9 1016 1475 49 22 0 chr15 56557317 56557502 -46937472 - B2_Mm2 SINE B2 -6 189 1 9 1016 1318 40 85 6 chr15 56557953 56558129 -46936845 - B2_Mm1a SINE B2 -3 190 1 9 1016 1085 65 0 14 chr15 56558182 56558323 -46936651 + B1_Mm SINE Alu 1 139 -8 1 1016 529 223 37 49 chr15 56558444 56558621 -46936353 - MTC LTR MaLR 0 421 183 1 1016 859 217 70 11 chr15 56558605 56558791 -46936183 + MTC LTR MaLR 225 421 0 1 1016 606 345 88 52 chr15 56559020 56559384 -46935590 - MLT2D LTR ERVL -17 397 21 1 1016 432 313 90 47 chr15 56559680 56560002 -46934972 - L2 LINE L2 -1059 2360 2025 1 1016 2129 196 53 70 chr15 56560103 56560689 -46934285 - Lx2B LINE L1 -23 6977 6402 1 1016 745 215 129 4 chr15 56560699 56560979 -46933995 - Lx9 LINE L1 -1 7643 7329 1 1016 399 56 0 0 chr15 56562114 56562168 -46932806 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1016 22 35 0 0 chr15 56563446 56563475 -46931499 + AT_rich Low_complexity Low_complexity 1 29 0 1 1016 492 18 0 0 chr15 56564858 56564915 -46930059 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1016 297 0 0 0 chr15 56564915 56564947 -46930027 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1016 538 287 43 14 chr15 56564957 56565095 -46929879 - B3A SINE B2 -56 142 1 1 1016 192 182 0 0 chr15 56565232 56565276 -46929698 + CT-rich Low_complexity Low_complexity 2 45 0 1 1016 710 271 75 0 chr15 56565961 56566160 -46928814 + B3 SINE B2 3 216 0 1 1016 211 129 48 0 chr15 56566320 56566382 -46928592 + T-rich Low_complexity Low_complexity 2 66 0 1 1016 387 271 46 8 chr15 56566385 56566515 -46928459 - Lx6 LINE L1 -709 6751 6617 1 1016 388 302 263 25 chr15 56566592 56567031 -46927943 - L1MC3 LINE L1 -113 7672 7130 1 1016 517 52 26 0 chr15 56567065 56567142 -46927832 + (CATA)n Simple_repeat Simple_repeat 1 79 0 1 1016 378 290 24 24 chr15 56567233 56567360 -46927614 - L1MC3 LINE L1 -919 7076 6950 1 1016 6657 131 54 10 chr15 56567445 56569464 -46925510 - Lx LINE L1 -5 6649 4517 1 1016 26 0 0 0 chr15 56569534 56569560 -46925414 + AT_rich Low_complexity Low_complexity 1 26 0 1 1016 22 106 0 0 chr15 56569617 56569702 -46925272 + AT_rich Low_complexity Low_complexity 1 85 0 1 1016 212 245 0 0 chr15 56569890 56569939 -46925035 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1016 232 221 55 136 chr15 56569948 56570058 -46924916 - RLTR25B LTR ERVK -186 842 742 1 1016 1072 78 0 0 chr15 56570128 56570270 -46924704 + B1_Mm SINE Alu 6 147 0 1 1016 333 93 0 0 chr15 56570270 56570324 -46924650 + (CAAAC)n Simple_repeat Simple_repeat 5 58 0 1 1016 207 0 0 0 chr15 56570328 56570351 -46924623 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1016 655 190 256 6 chr15 56570435 56570615 -46924359 + URR1A DNA MER1_type 2 226 0 1 1016 397 352 28 0 chr15 56571213 56571358 -46923616 - RSINE1 SINE B4 -15 150 2 1 1016 468 283 28 0 chr15 56571552 56571697 -46923277 - Lx6 LINE L1 -8 7452 7304 1 1016 3612 61 2 4 chr15 56571721 56572182 -46922792 + L1_Mus2 LINE L1 6107 6566 0 1 1016 72 40 0 0 chr15 56572416 56572516 -46922458 + AT_rich Low_complexity Low_complexity 1 100 0 1 1016 423 308 19 0 chr15 56572525 56572632 -46922342 - B1_Mur1 SINE Alu -38 111 3 1 1016 309 266 49 111 chr15 56572632 56572675 -46922299 - MT2B LTR ERVL -444 157 124 1 1016 491 352 26 4 chr15 56572704 56572932 -46922042 + MIR SINE MIR 20 252 -10 1 1016 210 105 0 0 chr15 56573030 56573068 -46921906 + (CAAAA)n Simple_repeat Simple_repeat 5 42 0 1 1016 344 239 44 0 chr15 56573214 56573373 -46921601 + (TA)n Simple_repeat Simple_repeat 2 167 0 1 1016 180 0 0 0 chr15 56573998 56574018 -46920956 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1016 269 26 26 0 chr15 56574230 56574268 -46920706 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1016 307 295 64 24 chr15 56574869 56574994 -46919980 + ID_B1 SINE B4 82 211 -13 1 1016 257 77 26 0 chr15 56576200 56576239 -46918735 + B1_Mus2 SINE Alu 108 147 0 1 1016 182 280 20 0 chr15 56577076 56577126 -46917848 - MIR3 SINE MIR -14 194 144 1 1016 198 0 0 0 chr15 56578136 56578158 -46916816 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1 1016 1352 56 0 6 chr15 56580313 56580492 -46914482 + (TTC)n Simple_repeat Simple_repeat 3 180 0 1 1016 288 0 0 0 chr15 56580494 56580526 -46914448 + (TTCTCC)n Simple_repeat Simple_repeat 5 36 0 1 1016 592 317 37 0 chr15 56581629 56581793 -46913181 + B3A SINE B2 3 172 -26 1 1016 911 185 0 0 chr15 56581996 56582142 -46912832 + B1_Mur3 SINE Alu 2 147 -2 1 1016 287 85 21 0 chr15 56582145 56582192 -46912782 + (CAA)n Simple_repeat Simple_repeat 3 50 0 1 1016 73 23 0 0 chr15 56582347 56582434 -46912540 + AT_rich Low_complexity Low_complexity 1 87 0 1 1016 465 279 78 52 chr15 56582622 56582815 -46912159 + MER20 DNA MER1_type 18 215 -4 1 1016 191 36 36 0 chr15 56583565 56583593 -46911381 + (TTTTTG)n Simple_repeat Simple_repeat 4 32 0 1 1016 1530 196 158 27 chr15 56585102 56585469 -46909505 - MTD LTR MaLR 0 419 5 1 1016 520 230 18 0 chr15 56586525 56586747 -46908227 + CT-rich Low_complexity Low_complexity 1 225 0 1 1016 207 0 0 0 chr15 56586747 56586770 -46908204 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 1016 256 271 0 33 chr15 56587485 56587546 -46907428 + ID4_ SINE ID 8 66 -17 1 1016 2545 140 23 2 chr15 56587817 56588247 -46906727 + Lx2A LINE L1 6567 7005 -3 1 1016 405 287 23 47 chr15 56588259 56588387 -46906587 + B3A SINE B2 72 196 -2 1 1016 558 196 32 89 chr15 56588391 56588474 -46906500 + Lx9 LINE L1 7267 7347 -297 1 1016 2653 34 3 9 chr15 56588474 56588804 -46906170 + L1Md_F2 LINE L1 6255 6582 0 1 1016 558 196 32 89 chr15 56588804 56588877 -46906097 + Lx9 LINE L1 7348 7414 -230 1 1016 231 242 15 0 chr15 56588880 56588946 -46906028 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 1016 40 73 0 0 chr15 56588997 56589079 -46905895 + AT_rich Low_complexity Low_complexity 1 82 0 1 1016 346 108 48 29 chr15 56589089 56589194 -46905780 + Lx9 LINE L1 7478 7584 -60 1 1016 353 281 10 40 chr15 56589255 56589355 -46905619 - MTEa LTR MaLR -42 337 241 1 1016 351 0 0 0 chr15 56589423 56589462 -46905512 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 1016 285 146 0 0 chr15 56589463 56589511 -46905463 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1016 471 35 0 0 chr15 56589517 56589574 -46905400 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 1 1016 1686 172 6 68 chr15 56589585 56589909 -46905065 + ORR1A4 LTR MaLR 1 304 -25 1 1016 216 67 0 0 chr15 56590168 56590198 -46904776 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 1016 369 264 85 8 chr15 56590262 56590392 -46904582 + L1MEd LINE L1 969 1108 -5011 1 1016 366 23 0 0 chr15 56590392 56590435 -46904539 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1016 620 311 39 61 chr15 56590896 56591208 -46903766 - MTEb LTR MaLR -74 305 1 1 1016 2414 301 114 42 chr15 56591210 56591450 -46903524 - MTEb-int LTR MaLR -2 1578 1360 1 1016 591 291 11 16 chr15 56591450 56591632 -46903342 + B3A SINE B2 2 182 -16 1 1016 2414 312 200 32 chr15 56591632 56592761 -46902213 - MTEb-int LTR MaLR -221 1359 2 1 1016 511 240 8 16 chr15 56592762 56592885 -46902089 - MTEb LTR MaLR 0 379 258 1 1016 359 315 118 56 chr15 56592899 56593094 -46901880 - MTEb LTR MaLR -160 219 13 1 1016 25 31 0 0 chr15 56593592 56593624 -46901350 + AT_rich Low_complexity Low_complexity 1 32 0 1 1016 1965 159 38 50 chr15 56593743 56594250 -46900724 - RLTR31_Mm LTR ERVK -144 440 1 1 1016 1366 205 104 42 chr15 56594434 56594790 -46900184 + ORR1C1 LTR MaLR 1 378 0 1 1016 196 326 62 34 chr15 56595584 56595730 -46899244 - L2a LINE L2 -30 3396 3247 1 1016 1008 86 0 0 chr15 56597252 56597392 -46897582 + (GGAGA)n Simple_repeat Simple_repeat 3 142 0 1 1016 690 13 0 0 chr15 56597432 56597511 -46897463 + (TC)n Simple_repeat Simple_repeat 2 80 0 1 1016 1232 277 100 48 chr15 56598427 56598927 -46896047 - RMER5 LTR ERV1 -8 526 1 1 1016 257 324 14 0 chr15 56599288 56599359 -46895615 + MTD LTR MaLR 263 334 -85 1 1016 182 191 21 0 chr15 56600160 56600207 -46894767 + GA-rich Low_complexity Low_complexity 1 48 0 1 1016 417 39 0 0 chr15 56600244 56600295 -46894679 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 1016 21 36 0 0 chr15 56601117 56601145 -46893829 + AT_rich Low_complexity Low_complexity 1 28 0 1 1016 287 143 333 19 chr15 56601298 56601406 -46893568 - B2_Mm2 SINE B2 -7 188 47 1 1016 1064 124 19 0 chr15 56601439 56601600 -46893374 - B2_Mm1t SINE B2 -15 178 15 1 1016 597 52 0 0 chr15 56602186 56602263 -46892711 + (TTCC)n Simple_repeat Simple_repeat 3 79 0 1 1016 258 32 0 0 chr15 56602777 56602808 -46892166 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1016 360 0 0 0 chr15 56603827 56603867 -46891107 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1016 287 288 0 0 chr15 56604489 56604569 -46890405 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 1016 319 350 0 46 chr15 56604572 56604660 -46890314 - RSINE1 SINE B4 0 165 83 1 1016 1157 222 53 170 chr15 56604660 56605261 -46889713 + RMER16 LTR ERVK 3 533 0 1 1016 211 219 0 0 chr15 56607274 56607315 -46887659 - MIR3 SINE MIR -51 157 117 1 1016 246 351 91 11 chr15 56608235 56608411 -46886563 - MIRb SINE MIR -76 192 3 1 1016 535 243 13 46 chr15 56609359 56609510 -46885464 + MTE2b LTR MaLR 234 379 0 1 1016 216 0 0 0 chr15 56611467 56611491 -46883483 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1016 306 0 0 0 chr15 56611496 56611530 -46883444 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 1016 228 185 0 0 chr15 56611581 56611635 -46883339 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1016 429 20 0 0 chr15 56611636 56611686 -46883288 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 1016 275 192 9 108 chr15 56612043 56612154 -46882820 - Lx9 LINE L1 -12 7632 7533 1 1016 456 111 0 0 chr15 56612159 56612240 -46882734 + (TG)n Simple_repeat Simple_repeat 1 81 0 1 1016 3038 222 51 19 chr15 56612242 56612969 -46882005 - Lx9 LINE L1 -223 7421 6672 1 1016 239 386 0 0 chr15 56613165 56613253 -46881721 + Tigger13a DNA MER2_type 60 147 -624 1 1016 284 324 36 0 chr15 56613475 56613586 -46881388 + BC1_Mm scRNA scRNA 8 122 -30 1 1016 284 333 116 0 chr15 56613708 56613855 -46881119 + Tigger13a DNA MER2_type 576 739 -32 1 1016 22 35 0 0 chr15 56614159 56614188 -46880786 + AT_rich Low_complexity Low_complexity 1 29 0 2 1016 184 230 127 63 chr15 56615036 56615115 -46879859 - MIRb SINE MIR -62 206 123 2 1016 426 20 0 0 chr15 56615152 56615203 -46879771 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1016 311 273 62 8 chr15 56615645 56615774 -46879200 - Lx7 LINE L1 -822 6874 6739 2 1016 1779 289 32 25 chr15 56616174 56616739 -46878235 - Lx7 LINE L1 -333 7363 6795 2 1016 261 0 0 0 chr15 56618526 56618555 -46876419 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1016 1438 54 16 0 chr15 56618566 56618750 -46876224 + B2_Mm2 SINE B2 2 188 -7 2 1016 23 0 0 0 chr15 56618762 56618785 -46876189 + AT_rich Low_complexity Low_complexity 1 23 0 2 1016 411 204 136 0 chr15 56619044 56619132 -46875842 - B1_Mur1 SINE Alu -28 121 22 2 1016 183 205 138 25 chr15 56619567 56619647 -46875327 - L3 LINE CR1 -7 4482 4394 2 1016 189 0 0 0 chr15 56620726 56620747 -46874227 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 2 1016 466 262 44 37 chr15 56620747 56620767 -46874207 + B4 SINE B4 70 190 -100 2 1016 772 60 0 0 chr15 56620767 56620867 -46874107 + B1_Mus1 SINE Alu 1 100 -48 2 1016 266 0 0 29 chr15 56620869 56620904 -46874070 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1016 466 262 44 37 chr15 56620904 56620916 -46874058 + B4 SINE B4 193 204 -88 2 1016 186 71 0 0 chr15 56621405 56621433 -46873541 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 1016 396 342 41 5 chr15 56621535 56621729 -46873245 + MLT1C LTR MaLR 267 467 0 2 1016 277 204 46 29 chr15 56622080 56622185 -46872789 - MTE2a LTR MaLR 0 379 258 2 1017 268 341 11 0 chr15 56623526 56623617 -46871357 - MER58C DNA MER1_type 0 215 124 2 1017 654 98 0 43 chr15 56623626 56623764 -46871210 + (TCTCTG)n Simple_repeat Simple_repeat 6 137 0 2 1017 369 0 0 0 chr15 56623761 56623802 -46871172 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1017 323 271 102 0 chr15 56624013 56624131 -46870843 - Cheshire DNA MER1_type -2137 283 154 2 1017 212 154 0 0 chr15 56625127 56625166 -46869808 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 1017 243 190 0 0 chr15 56625903 56625961 -46869013 + (TAAA)n Simple_repeat Simple_repeat 3 60 0 2 1017 568 142 92 23 chr15 56627248 56627378 -46867596 + Lx4B LINE L1 6903 7041 -17 2 1017 806 137 0 67 chr15 56629184 56629348 -46865626 - L1Md_F3 LINE L1 -1 6583 6431 2 1017 1709 57 0 0 chr15 56630409 56630618 -46864356 - Lx3_Mus LINE L1 -331 6678 6470 2 1017 21 0 0 0 chr15 56631664 56631685 -46863289 + AT_rich Low_complexity Low_complexity 1 21 0 2 1017 599 269 21 0 chr15 56631715 56631860 -46863114 + Lx9 LINE L1 6568 6715 -929 2 1017 33 56 0 0 chr15 56632033 56632087 -46862887 + AT_rich Low_complexity Low_complexity 1 54 0 2 1017 412 374 14 0 chr15 56632519 56632658 -46862316 - B1F2 SINE Alu -7 142 2 2 1017 246 281 74 46 chr15 56633086 56633194 -46861780 - L2 LINE L2 -470 2949 2839 2 1017 250 227 128 60 chr15 56633988 56634105 -46860869 - B1F2 SINE Alu -21 128 4 2 1017 508 304 0 0 chr15 56634105 56634133 -46860841 - ID SINE ID -140 84 57 2 1017 2307 97 83 118 chr15 56634484 56634976 -46859998 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1017 6149 34 3 26 chr15 56634976 56635740 -46859234 - IAPEz-int LTR ERVK 0 6481 5736 2 1017 2253 58 0 0 chr15 56635739 56636017 -46858957 - IAPEz-int LTR ERVK -4845 1636 1359 2 1017 3439 70 20 31 chr15 56636017 56636756 -46858218 - IAPEz-int LTR ERVK -5819 662 9 2 1017 2459 106 112 23 chr15 56636757 56637193 -46857781 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1017 712 277 149 54 chr15 56637255 56637591 -46857383 + ORR1D2 LTR MaLR 2 369 -1 2 1017 181 355 65 0 chr15 56637608 56637701 -46857273 + L2a LINE L2 3272 3370 -56 2 1017 370 281 117 50 chr15 56638381 56638722 -46856252 + L1MA6 LINE L1 5893 6256 -44 2 1017 201 313 15 15 chr15 56639068 56639136 -46855838 - L2b LINE L2 0 3375 3308 2 1017 294 29 0 0 chr15 56639970 56640005 -46854969 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1017 277 264 33 33 chr15 56640507 56640597 -46854377 + MTEa LTR MaLR 290 379 0 2 1017 576 106 0 0 chr15 56640973 56641058 -46853916 + (TA)n Simple_repeat Simple_repeat 1 85 0 2 1017 400 289 269 32 chr15 56641542 56641653 -46853321 - MLT2B4 LTR ERVL -4 552 403 2 1017 1599 124 24 65 chr15 56641653 56641989 -46852985 - RLTRETN_Mm LTR ERVK 0 322 1 2 1017 400 289 269 32 chr15 56641989 56642249 -46852725 - MLT2B4 LTR ERVL -154 402 94 2 1017 1013 230 273 12 chr15 56642209 56642535 -46852439 + MTD LTR MaLR 9 419 0 2 1017 261 347 73 0 chr15 56642535 56642659 -46852315 - MLT2B4 LTR ERVL -408 148 16 2 1017 237 211 0 0 chr15 56642948 56643005 -46851969 + GA-rich Low_complexity Low_complexity 2 58 0 2 1017 269 355 64 0 chr15 56644124 56644234 -46850740 + MIRb SINE MIR 38 154 -114 2 1017 311 333 38 70 chr15 56644884 56645197 -46849777 + L1MD2 LINE L1 5919 6221 -138 2 1017 26 0 0 0 chr15 56646257 56646283 -46848691 + AT_rich Low_complexity Low_complexity 1 26 0 2 1017 5792 188 51 40 chr15 56646698 56647981 -46846993 - Lx5 LINE L1 0 7050 5753 2 1017 23 0 0 0 chr15 56648039 56648062 -46846912 + AT_rich Low_complexity Low_complexity 1 23 0 2 1017 22 35 0 0 chr15 56648746 56648775 -46846199 + AT_rich Low_complexity Low_complexity 1 29 0 2 1017 578 307 67 31 chr15 56648777 56648972 -46846002 + B3 SINE B2 15 216 0 2 1017 183 42 0 0 chr15 56650210 56650234 -46844740 + (CAA)n Simple_repeat Simple_repeat 2 25 0 2 1017 423 0 0 0 chr15 56650380 56650427 -46844547 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 1017 21 36 0 0 chr15 56651332 56651360 -46843614 + AT_rich Low_complexity Low_complexity 1 28 0 2 1017 431 296 52 6 chr15 56651403 56651576 -46843398 + L1MA5 LINE L1 6120 6300 0 2 1017 30 0 0 0 chr15 56654767 56654797 -46840177 + AT_rich Low_complexity Low_complexity 1 30 0 2 1017 735 272 253 33 chr15 56655394 56655694 -46839280 - ORR1D1 LTR MaLR -8 366 1 2 1017 289 289 72 0 chr15 56655759 56655842 -46839132 + RMER30 DNA MER1_type 8 96 -106 2 1017 390 314 0 0 chr15 56655829 56655931 -46839043 - Charlie12 DNA MER1_type -2765 108 7 2 1017 273 400 104 42 chr15 56656179 56656584 -46838390 - LTR16A1 LTR ERVL -4 452 23 2 1017 1974 114 18 61 chr15 56656734 56657062 -46837912 + ORR1A3 LTR MaLR 13 326 0 2 1017 1275 100 15 31 chr15 56657218 56657253 -46837721 - B2_Mm2 SINE B2 -1 194 165 2 1017 246 32 0 0 chr15 56657253 56657284 -46837690 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 2 1017 1275 100 15 31 chr15 56657284 56657444 -46837530 - B2_Mm2 SINE B2 -31 164 2 2 1017 212 243 65 39 chr15 56657661 56657738 -46837236 - MIR SINE MIR -110 152 74 2 1017 1101 301 21 75 chr15 56658162 56658536 -46836438 - ORR1E LTR MaLR -5 354 1 2 1017 378 0 0 0 chr15 56659055 56659097 -46835877 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1017 2908 60 16 8 chr15 56659428 56659816 -46835158 + L1Md_F2 LINE L1 6191 6581 -1 2 1017 189 107 0 0 chr15 56659840 56659868 -46835106 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2 1017 252 196 78 0 chr15 56659916 56659967 -46835007 - Lx7 LINE L1 -1229 6244 6190 2 1017 1179 307 62 28 chr15 56660312 56661030 -46833944 - Lx7 LINE L1 -1657 5987 5227 2 1017 935 162 0 13 chr15 56661030 56661180 -46833794 - B1_Mur4 SINE Alu -2 148 1 2 1017 931 313 45 74 chr15 56661180 56661203 -46833771 - Lx7 LINE L1 -621 5226 5212 2 1017 444 37 0 0 chr15 56661203 56661257 -46833717 + (TATG)n Simple_repeat Simple_repeat 4 57 0 2 1017 931 313 45 74 chr15 56661257 56661362 -46833612 - Lx7 LINE L1 -636 5211 5119 2 1017 6339 198 58 74 chr15 56662041 56662168 -46832806 - RMER3D-int LTR ERVK -426 2416 2298 2 1017 1026 96 0 0 chr15 56662168 56662303 -46832671 + B1_Mus2 SINE Alu 2 136 -11 2 1017 591 40 0 0 chr15 56662305 56662379 -46832595 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 2 1017 6339 202 59 70 chr15 56662379 56664361 -46830613 - RMER3D-int LTR ERVK -545 2297 1 2 1017 3433 195 16 5 chr15 56664395 56665009 -46829965 - RLTR17 LTR ERVK -71 621 1 2 1017 1385 258 20 66 chr15 56665362 56665769 -46829205 - Lx6 LINE L1 -19 7441 7054 2 1017 4506 257 53 18 chr15 56665739 56665864 -46829110 - Lx6 LINE L1 -573 6887 6738 2 1017 387 0 0 0 chr15 56665864 56665907 -46829067 + (TTA)n Simple_repeat Simple_repeat 3 45 0 2 1017 15030 203 56 48 chr15 56665907 56669401 -46825573 - Lx6 LINE L1 -723 6737 3328 2 1017 2069 189 32 10 chr15 56669401 56669813 -46825161 + MTC LTR MaLR 1 421 0 2 1017 15030 186 57 58 chr15 56669813 56670131 -46824843 - Lx6 LINE L1 -2553 3327 3011 2 1017 495 0 0 0 chr15 56670131 56670186 -46824788 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 2 1017 15030 186 57 58 chr15 56670186 56671328 -46823646 - Lx6 LINE L1 -2870 3010 1764 2 1017 3032 213 47 19 chr15 56671336 56672038 -46822936 - RMER1B Other Other -12 1054 15 2 1017 35 41 0 0 chr15 56673969 56674018 -46820956 + AT_rich Low_complexity Low_complexity 1 49 0 2 1017 237 108 0 0 chr15 56674238 56674275 -46820699 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1017 392 235 24 0 chr15 56674292 56674377 -46820597 - ID_B1 SINE B4 -8 216 130 2 1017 249 271 0 0 chr15 56674326 56674385 -46820589 - PB1D10 SINE Alu -18 99 41 2 1017 307 296 0 0 chr15 56674546 56674627 -46820347 + ID4 SINE ID 2 82 -1 2 1017 385 232 24 0 chr15 56674974 56675056 -46819918 - ID_B1 SINE B4 -8 216 133 2 1017 280 312 86 0 chr15 56675056 56675067 -46819907 - B1F SINE Alu -8 141 41 2 1017 342 0 0 0 chr15 56675249 56675287 -46819687 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 2 1017 445 192 61 0 chr15 56675522 56675621 -46819353 + URR1B DNA MER1_type 121 225 0 2 1017 365 0 0 22 chr15 56676778 56676824 -46818150 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 1017 384 364 0 19 chr15 56677048 56677202 -46817772 + RSINE1 SINE B4 4 154 -11 2 1017 222 233 0 0 chr15 56677233 56677293 -46817681 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 1017 285 227 6 42 chr15 56677478 56677558 -46817416 + ID2 SINE ID 8 88 -64 2 1017 349 341 52 22 chr15 56678099 56678234 -46816740 + RSINE1 SINE B4 3 141 -24 2 1017 396 139 0 0 chr15 56678269 56678348 -46816626 + (TG)n Simple_repeat Simple_repeat 1 79 0 2 1017 649 299 69 47 chr15 56678555 56678832 -46816142 + B4 SINE B4 4 286 -6 2 1017 378 0 0 0 chr15 56678846 56678888 -46816086 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1017 315 361 16 63 chr15 56680613 56680740 -46814234 - RSINE1 SINE B4 0 165 45 2 1017 302 195 0 58 chr15 56680741 56680861 -46814113 + GA-rich Low_complexity Low_complexity 3 115 0 3 1017 1971 236 29 14 chr15 56680863 56681348 -46813626 + RLTR16 LTR ERVK 2 493 -12 3 1017 436 223 0 14 chr15 56681563 56681704 -46813270 + GA-rich Low_complexity Low_complexity 2 140 0 3 1017 190 75 49 24 chr15 56682248 56682289 -46812685 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 3 1017 477 359 84 48 chr15 56682590 56683006 -46811968 + MLT1E2 LTR MaLR 18 448 -179 3 1017 576 40 0 0 chr15 56683905 56683980 -46810994 + (TG)n Simple_repeat Simple_repeat 1 75 0 3 1017 26 0 0 0 chr15 56684377 56684403 -46810571 + AT_rich Low_complexity Low_complexity 1 26 0 3 1017 767 198 0 11 chr15 56684473 56684652 -46810322 + GA-rich Low_complexity Low_complexity 4 180 0 3 1017 252 244 13 0 chr15 56684960 56685038 -46809936 + (TCTG)n Simple_repeat Simple_repeat 1 79 0 3 1017 342 176 0 0 chr15 56685038 56685123 -46809851 + CT-rich Low_complexity Low_complexity 2 86 0 3 1017 315 299 61 30 chr15 56685203 56685334 -46809640 - ID_B1 SINE B4 0 224 90 3 1017 198 369 74 0 chr15 56685432 56685554 -46809420 + L2a LINE L2 3283 3413 -13 3 1017 312 276 3 14 chr15 56686318 56686413 -46808561 - ID4 SINE ID -50 102 8 3 1017 228 326 133 18 chr15 56686919 56687256 -46807718 - L1MC LINE L1 -2241 5641 5266 3 1017 965 218 0 11 chr15 56687398 56687588 -46807386 + URR1A DNA MER1_type 2 189 -37 3 1017 288 259 27 13 chr15 56688194 56688343 -46806631 + GA-rich Low_complexity Low_complexity 3 153 0 3 1017 305 330 29 0 chr15 56690671 56690774 -46804200 + MIRc SINE MIR 30 135 -133 3 1017 297 0 0 0 chr15 56690806 56690839 -46804135 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1017 540 0 0 0 chr15 56690839 56690899 -46804075 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 1017 633 105 0 0 chr15 56691874 56691969 -46803005 + (TTCC)n Simple_repeat Simple_repeat 3 97 0 3 1017 276 311 78 0 chr15 56692128 56692231 -46802743 + B4A SINE B4 123 233 -59 3 1017 490 346 68 12 chr15 56692226 56692387 -46802587 + B3A SINE B2 8 177 -21 3 1017 369 0 0 0 chr15 56692534 56692575 -46802399 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1017 465 90 0 0 chr15 56692875 56692942 -46802032 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 1017 235 85 43 0 chr15 56693322 56693369 -46801605 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1017 1044 296 57 126 chr15 56693370 56694019 -46800955 - RLTR18 LTR ERVK -10 606 3 3 1017 939 273 86 100 chr15 56694530 56694982 -46799992 - RLTR18B LTR ERVK -52 460 15 3 1017 482 368 90 36 chr15 56695299 56696011 -46798963 + L2a LINE L2 2680 3424 -2 3 1017 2220 184 28 12 chr15 56697732 56698162 -46796812 + Lx7 LINE L1 6714 7150 -546 3 1017 777 62 61 20 chr15 56698170 56698317 -46796657 + (GGGAGA)n Simple_repeat Simple_repeat 6 158 0 3 1017 230 342 13 20 chr15 56698317 56698466 -46796508 + Lx7 LINE L1 7137 7284 -412 3 1017 607 128 9 9 chr15 56698528 56698638 -46796336 + (TCC)n Simple_repeat Simple_repeat 3 112 0 3 1017 225 0 0 0 chr15 56698869 56698894 -46796080 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 3 1017 294 304 97 25 chr15 56699025 56699221 -46795753 - Lx7 LINE L1 -1931 5765 5522 3 1017 270 95 0 0 chr15 56699791 56699833 -46795141 + (CAA)n Simple_repeat Simple_repeat 1 42 0 3 1017 248 289 87 0 chr15 56699964 56700068 -46794906 - PB1D7 SINE Alu -5 115 3 3 1017 1410 70 0 0 chr15 56700072 56700970 -46794004 + (CA)n Simple_repeat Simple_repeat 1 898 0 3 1017 235 146 0 35 chr15 56701522 56701579 -46793395 + GA-rich Low_complexity Low_complexity 2 56 0 3 1017 452 359 0 60 chr15 56701721 56701872 -46793102 + RSINE1 SINE B4 6 147 -18 3 1017 260 102 20 0 chr15 56701875 56701924 -46793050 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1017 5304 74 13 3 chr15 56702257 56702972 -46792002 - L1_Mus3 LINE L1 -1 6637 5916 3 1017 5699 87 1 0 chr15 56702974 56703858 -46791116 + L1_Mus3 LINE L1 5032 5916 -722 3 1017 234 0 0 0 chr15 56704934 56704960 -46790014 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 3 1017 1118 67 0 0 chr15 56704960 56705095 -46789879 - B1_Mm SINE Alu -12 135 1 3 1017 2398 52 3 26 chr15 56705366 56705705 -46789269 + RLTR10 LTR ERVK 1 331 -59 3 1017 961 107 19 12 chr15 56705743 56705904 -46789070 + RLTR10 LTR ERVK 227 388 -2 3 1017 7803 40 7 5 chr15 56705904 56706908 -46788066 + RLTR10-int LTR ERVK 6 988 -999 3 1017 8249 22 7 0 chr15 56706986 56707974 -46787000 + RLTR10-int LTR ERVK 990 1984 -3 3 1017 2398 52 3 26 chr15 56707976 56708315 -46786659 + RLTR10 LTR ERVK 1 331 -59 3 1017 961 107 19 12 chr15 56708353 56708514 -46786460 + RLTR10 LTR ERVK 227 388 -2 3 1017 288 0 0 0 chr15 56708520 56708552 -46786422 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1017 4685 74 13 2 chr15 56709021 56709646 -46785328 - L1_Mus1 LINE L1 0 6567 5936 3 1017 312 27 0 0 chr15 56709678 56709715 -46785259 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1017 7338 40 10 1 chr15 56710455 56711650 -46783324 - L1Md_F2 LINE L1 -24 6558 5348 3 1017 302 48 69 46 chr15 56712206 56712293 -46782681 + T-rich Low_complexity Low_complexity 2 90 0 3 1017 250 250 84 36 chr15 56714354 56714437 -46780537 - B3 SINE B2 -5 211 125 3 1017 227 271 139 85 chr15 56714415 56714580 -46780394 - RMER2 LTR ERV1 -27 540 367 3 1017 243 61 0 0 chr15 56714854 56714887 -46780087 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 3 1017 612 299 24 6 chr15 56714906 56715071 -46779903 - B3 SINE B2 -46 170 3 3 1017 25 51 0 0 chr15 56715071 56715110 -46779864 + AT_rich Low_complexity Low_complexity 1 39 0 3 1017 328 355 59 98 chr15 56715110 56715313 -46779661 - MLT1A0 LTR MaLR -101 264 70 3 1017 489 34 0 0 chr15 56715358 56715417 -46779557 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 1017 203 284 0 0 chr15 56716230 56716297 -46778677 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 1017 790 177 44 61 chr15 56716534 56716763 -46778211 + L1_Rod LINE L1 4530 4754 -1093 3 1017 964 55 70 0 chr15 56716861 56716989 -46777985 + B1_Mus1 SINE Alu 2 138 -10 3 1017 1311 7 0 0 chr15 56716989 56717137 -46777837 + (GAA)n Simple_repeat Simple_repeat 2 149 0 3 1017 9579 13 1 0 chr15 56717173 56718336 -46776638 + L1Md_Gf LINE L1 1 1142 -5380 3 1017 11058 24 0 0 chr15 56721332 56722686 -46772288 + L1Md_T LINE L1 4233 5586 -297 3 1017 9011 6 0 0 chr15 56722686 56723682 -46771292 + L1Md_T LINE L1 5587 6582 0 3 1017 252 0 0 0 chr15 56723704 56723732 -46771242 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1017 742 250 25 12 chr15 56726789 56726951 -46768023 - MTC LTR MaLR -62 359 196 3 1017 827 119 0 53 chr15 56726951 56727138 -46767836 + CT-rich Low_complexity Low_complexity 3 179 0 3 1017 1135 86 11 17 chr15 56727140 56727318 -46767656 + (TTTCC)n Simple_repeat Simple_repeat 2 178 0 3 1017 777 213 136 5 chr15 56727346 56727361 -46767613 - MTC LTR MaLR -213 208 194 3 1017 3781 130 16 35 chr15 56727361 56727998 -46766976 - Lx2 LINE L1 0 6997 6373 3 1017 777 213 136 5 chr15 56727998 56728166 -46766808 - MTC LTR MaLR -228 193 1 3 1017 439 361 0 36 chr15 56728290 56728428 -46766546 + B1F2 SINE Alu 3 135 -14 3 1017 400 0 0 52 chr15 56728891 56728949 -46766025 + (CAAAAA)n Simple_repeat Simple_repeat 2 56 0 3 1017 731 344 89 0 chr15 56729271 56729629 -46765345 + L3 LINE CR1 3121 3510 -979 3 1017 1201 62 0 0 chr15 56730047 56730193 -46764781 + B1_Mus1 SINE Alu 2 147 -1 3 1017 348 127 0 0 chr15 56730194 56730249 -46764725 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 3 1017 5558 110 29 6 chr15 56730757 56732391 -46762583 + L1VL4 LINE L1 92 1762 -1797 3 1017 5620 132 123 28 chr15 56732411 56733575 -46761399 - Lx3_Mus LINE L1 -8 7001 5727 3 1017 36279 30 0 0 chr15 56733558 56740159 -46754815 - L1Md_T LINE L1 0 6585 1 3 1017 14954 96 69 40 chr15 56740163 56742353 -46752621 - L1_Mur1 LINE L1 -131 5755 3485 3 1017 5449 72 1 12 chr15 56742353 56743074 -46751900 - L1Md_F2 LINE L1 -19 6563 5851 3 1017 14954 96 69 40 chr15 56743074 56743478 -46751496 - L1_Mur1 LINE L1 -2402 3484 3086 3 1017 6979 114 1 8 chr15 56743489 56744913 -46750061 + L1_Mus4 LINE L1 5217 6634 -2 3 1017 2485 51 0 6 chr15 56744914 56745247 -46749727 + L1Md_A LINE L1 643 973 -5751 3 1017 1755 148 0 40 chr15 56745385 56745738 -46749236 + L1_Mur2 LINE L1 4150 4488 -1389 3 1017 35131 27 1 8 chr15 56745729 56750734 -46744240 + L1Md_T LINE L1 624 5585 -298 3 1017 8381 38 0 0 chr15 56750735 56751730 -46743244 + L1Md_T LINE L1 5587 6581 -1 3 1017 5781 104 16 7 chr15 56751905 56752770 -46742204 + Lx3_Mus LINE L1 6129 7001 -8 3 1017 23 0 0 0 chr15 56752771 56752794 -46742180 + AT_rich Low_complexity Low_complexity 1 23 0 3 1017 281 342 84 80 chr15 56753901 56753922 -46741052 + MTEb LTR MaLR 68 83 -276 3 1017 414 0 0 0 chr15 56753922 56753968 -46741006 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 3 127 408 326 63 54 chr15 56753968 56754232 -46740742 + MTEb LTR MaLR 84 372 -7 3 1018 211 358 0 43 chr15 56754260 56754330 -46740644 - ID4_ SINE ID -5 78 12 3 1018 1558 256 60 13 chr15 56757541 56758007 -46736967 - Lx8 LINE L1 -2 7471 6984 3 1018 242 309 12 12 chr15 56758181 56758263 -46736711 + CT-rich Low_complexity Low_complexity 3 84 0 3 1018 200 289 0 62 chr15 56758304 56758385 -46736589 + CT-rich Low_complexity Low_complexity 4 79 0 3 1018 1567 196 151 10 chr15 56758622 56759039 -46735935 + Lx5 LINE L1 6575 7050 0 3 1018 1295 285 25 0 chr15 56759287 56759652 -46735322 + ORR1D1 LTR MaLR 1 374 0 3 1018 227 284 13 39 chr15 56760000 56760011 -46734963 - MER33 DNA MER1_type -230 94 84 3 1018 1504 52 0 0 chr15 56760011 56760203 -46734771 - L1_Mus1 LINE L1 0 6567 6376 3 1018 227 284 13 39 chr15 56760203 56760268 -46734706 - MER33 DNA MER1_type -241 83 20 3 1018 390 294 34 143 chr15 56760637 56760875 -46734099 + B3 SINE B2 5 216 0 3 1018 6477 80 10 7 chr15 56761971 56763475 -46731499 - L1Md_F2 LINE L1 -1 6581 5071 3 1018 19194 96 19 1 chr15 56763467 56767226 -46727748 - L1Md_F2 LINE L1 -1878 4005 178 3 1018 3763 62 6 12 chr15 56768602 56769093 -46725881 + L1_Mus1 LINE L1 6080 6567 0 3 1018 1031 62 0 71 chr15 56769120 56769275 -46725699 + B1_Mus1 SINE Alu 5 148 0 3 1018 375 60 0 0 chr15 56769453 56769503 -46725471 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1018 381 215 38 0 chr15 56769606 56769685 -46725289 - B4 SINE B4 -210 82 1 3 1018 21 36 0 0 chr15 56769773 56769801 -46725173 + AT_rich Low_complexity Low_complexity 1 28 0 3 1018 969 61 0 8 chr15 56770045 56770177 -46724797 - L1_Mus1 LINE L1 -1 6566 6436 4 1018 234 91 0 0 chr15 56770177 56770210 -46724764 - L1_Mm LINE L1 -1190 4693 4661 4 1018 496 59 0 14 chr15 56770195 56770264 -46724710 + L1_Mus3 LINE L1 5372 5439 -444 4 1018 7354 81 16 2 chr15 56770679 56771789 -46723185 + L1_Mus3 LINE L1 5512 6638 0 4 1018 270 0 0 0 chr15 56771915 56771945 -46723029 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1018 421 335 76 69 chr15 56772012 56772216 -46722758 - B4 SINE B4 -14 278 68 4 1018 218 0 45 45 chr15 56772216 56772260 -46722714 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 1018 421 335 76 69 chr15 56772260 56772331 -46722643 - B4 SINE B4 -225 67 1 4 1018 221 276 17 0 chr15 56772952 56773010 -46721964 - B4A SINE B4 -231 61 3 4 1018 39470 9 0 2 chr15 56773096 56780504 -46714470 - L1Md_A LINE L1 0 6582 1 4 1018 212 265 24 24 chr15 56780742 56780827 -46714147 + (TATG)n Simple_repeat Simple_repeat 4 88 0 4 1018 551 363 75 38 chr15 56780865 56781131 -46713843 - B4A SINE B4 -14 278 3 4 1018 801 260 26 48 chr15 56781131 56781351 -46713623 - B4A SINE B4 -69 223 9 4 1018 195 161 54 0 chr15 56781755 56781811 -46713163 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1018 560 275 14 0 chr15 56781947 56782089 -46712885 + B1_Mur2 SINE Alu 5 148 -1 4 1018 32 0 0 0 chr15 56783021 56783053 -46711921 + AT_rich Low_complexity Low_complexity 1 32 0 4 1018 180 125 0 0 chr15 56784171 56784203 -46710771 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1018 466 343 117 16 chr15 56784406 56784655 -46710319 - MTEa LTR MaLR -31 348 75 4 1018 693 237 26 63 chr15 56785111 56785300 -46709674 - B3 SINE B2 -10 185 4 4 1018 298 347 40 20 chr15 56785550 56785700 -46709274 - Arthur1 DNA Tip100 -3360 587 435 4 1018 3000 123 87 10 chr15 56786464 56787045 -46707929 - RMER17A2 LTR ERVK -190 716 1 4 1018 604 354 44 6 chr15 56787048 56787369 -46707605 - Lx8 LINE L1 -252 7221 6889 4 1018 342 0 0 0 chr15 56787858 56787896 -46707078 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1018 253 361 35 84 chr15 56788882 56789109 -46705865 + MIRc SINE MIR 9 224 -44 4 1018 5780 71 7 0 chr15 56789473 56790219 -46704755 - Lx3_Mus LINE L1 0 7009 6259 4 1018 1060 286 81 42 chr15 56791165 56791523 -46703451 - MTE2b LTR MaLR -7 372 1 4 1018 8444 78 7 1 chr15 56791561 56792750 -46702224 - L1Md_F2 LINE L1 -720 5163 3968 4 1018 3182 40 2 0 chr15 56792748 56793150 -46701824 + L1Md_F2 LINE L1 5184 5586 -297 4 1018 8319 35 3 0 chr15 56793150 56794142 -46700832 + L1Md_F2 LINE L1 5587 6581 -1 4 1018 39 60 0 0 chr15 56795420 56795487 -46699487 + AT_rich Low_complexity Low_complexity 1 67 0 4 1018 215 341 118 8 chr15 56796148 56796275 -46698699 - RSINE1 SINE B4 0 165 25 4 1018 1137 128 0 0 chr15 56796332 56796512 -46698462 + (TTC)n Simple_repeat Simple_repeat 1 180 0 4 1018 1013 150 0 6 chr15 56796528 56796593 -46698381 + polypyrimidine Low_complexity Low_complexity 116 180 0 4 1018 1305 83 0 0 chr15 56796593 56796773 -46698201 + (TTC)n Simple_repeat Simple_repeat 1 180 0 4 1018 1013 150 0 6 chr15 56796773 56796888 -46698086 + polypyrimidine Low_complexity Low_complexity 1 115 0 4 1018 241 333 92 0 chr15 56796904 56796991 -46697983 + PB1D7 SINE Alu 19 113 -7 4 1018 863 154 156 20 chr15 56797210 56797409 -46697565 + URR1A DNA MER1_type 1 226 0 4 1018 24 67 0 0 chr15 56797657 56797702 -46697272 + AT_rich Low_complexity Low_complexity 1 45 0 4 1018 4448 201 25 15 chr15 56797916 56798968 -46696006 - L1_Mur3 LINE L1 -441 5439 4378 4 1018 2536 202 49 8 chr15 56798966 56799618 -46695356 - L1_Mur3 LINE L1 -1809 4071 3393 4 1018 2409 73 30 0 chr15 56799632 56799962 -46695012 - Lx3_Mus LINE L1 -204 6805 6466 4 1018 4011 196 43 63 chr15 56799959 56801389 -46693585 - L1_Mur3 LINE L1 -4191 1689 298 4 1018 813 292 0 10 chr15 56803516 56803720 -46691254 - B3 SINE B2 -10 206 5 4 1018 404 289 0 20 chr15 56803819 56803830 -46691144 - PB1D10 SINE Alu -2 115 106 4 1018 620 102 10 0 chr15 56803830 56803928 -46691046 + (TTA)n Simple_repeat Simple_repeat 2 100 0 4 1018 404 289 0 20 chr15 56803928 56804015 -46690959 - PB1D10 SINE Alu -12 105 19 4 1018 207 0 0 0 chr15 56804438 56804461 -46690513 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1018 1209 135 0 5 chr15 56805310 56805503 -46689471 - B2_Mm2 SINE B2 -2 193 2 4 1018 501 243 21 0 chr15 56805512 56805652 -46689322 + Lx6 LINE L1 7316 7458 -2 4 1018 500 0 17 0 chr15 56805700 56805760 -46689214 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 4 1018 599 312 115 28 chr15 56805770 56806232 -46688742 + Lx8 LINE L1 6970 7471 -2 4 1018 528 238 53 38 chr15 56806561 56806692 -46688282 - B1F SINE Alu -14 135 3 4 1018 284 320 164 57 chr15 56807985 56808082 -46686892 - MLT1E3 LTR MaLR 0 624 508 4 1018 396 0 0 0 chr15 56808082 56808126 -46686848 + (TTG)n Simple_repeat Simple_repeat 2 45 0 4 1018 284 320 164 57 chr15 56808126 56808187 -46686787 - MLT1E3 LTR MaLR -117 507 449 4 1018 277 310 83 30 chr15 56808600 56808733 -46686241 - B1F1 SINE Alu -9 140 1 4 1018 297 109 0 0 chr15 56808941 56808987 -46685987 + (CATA)n Simple_repeat Simple_repeat 3 48 0 4 1018 204 167 0 0 chr15 56810516 56810564 -46684410 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1018 22 0 0 0 chr15 56811987 56812009 -46682965 + AT_rich Low_complexity Low_complexity 1 22 0 4 1018 660 113 9 0 chr15 56812672 56812778 -46682196 - Lx3A LINE L1 -710 6271 6165 4 1018 2570 129 55 14 chr15 56812779 56813212 -46681762 + Lx3A LINE L1 6528 6978 -3 4 1018 27 0 0 0 chr15 56813213 56813240 -46681734 + AT_rich Low_complexity Low_complexity 1 27 0 4 1018 555 78 0 0 chr15 56813265 56813342 -46681632 + (TG)n Simple_repeat Simple_repeat 2 78 0 4 1018 38591 17 0 6 chr15 56813403 56819849 -46675125 - L1Md_A LINE L1 0 6582 214 4 1018 369 0 0 0 chr15 56820249 56820290 -46674684 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1018 1982 139 0 0 chr15 56820505 56820844 -46674130 + L1_Mur2 LINE L1 4150 4488 -1389 4 1018 9752 88 73 14 chr15 56820835 56824099 -46670875 + Lx2B LINE L1 415 5585 -298 4 1018 8211 45 1 0 chr15 56824099 56825094 -46669880 + L1Md_T LINE L1 5587 6582 0 4 1018 7603 219 237 26 chr15 56825094 56825919 -46669055 + Lx2B LINE L1 4472 5285 -592 4 1018 4343 53 13 2 chr15 56825919 56826469 -46668505 + L1Md_F3 LINE L1 6029 6584 0 4 1018 7603 154 96 16 chr15 56826469 56827358 -46667616 + Lx2B LINE L1 5286 6185 -815 4 1018 21 57 0 0 chr15 56827379 56827414 -46667560 + AT_rich Low_complexity Low_complexity 1 35 0 4 1018 22 35 0 0 chr15 56827927 56827956 -46667018 + AT_rich Low_complexity Low_complexity 1 29 0 4 1018 450 0 0 0 chr15 56828009 56828059 -46666915 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 4 1018 270 0 0 0 chr15 56828071 56828101 -46666873 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1018 321 294 0 0 chr15 56828481 56828566 -46666408 + (CA)n Simple_repeat Simple_repeat 1 85 0 4 1018 470 61 0 15 chr15 56828566 56828633 -46666341 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 1018 395 294 124 14 chr15 56828823 56828968 -46666006 + MER20 DNA MER1_type 58 218 -1 4 1018 7250 89 1 1 chr15 56831998 56833030 -46661944 + L1Md_F2 LINE L1 4554 5585 -298 4 1018 7502 63 10 19 chr15 56833031 56833242 -46661732 + L1Md_F2 LINE L1 5587 5797 -785 4 1018 1104 95 0 0 chr15 56833242 56833389 -46661585 + B1_Mus2 SINE Alu 1 147 0 4 1018 7502 63 10 19 chr15 56833389 56834182 -46660792 + L1Md_F2 LINE L1 5798 6582 0 4 1018 21 0 0 0 chr15 56834557 56834578 -46660396 + AT_rich Low_complexity Low_complexity 1 21 0 4 1018 305 377 45 45 chr15 56835256 56835456 -46659518 - MLT1C LTR MaLR -158 309 110 4 1018 228 304 43 0 chr15 56835462 56835531 -46659443 + MLT1B LTR MaLR 319 390 0 4 1018 254 319 8 25 chr15 56836130 56836252 -46658722 + CT-rich Low_complexity Low_complexity 1 120 0 4 1018 4829 94 81 143 chr15 56836252 56837243 -46657731 + RLTR13B3 LTR ERVK 1 929 0 4 1018 534 31 0 0 chr15 56837243 56837307 -46657667 + (TTTCC)n Simple_repeat Simple_repeat 3 66 0 4 1018 414 0 0 0 chr15 56837938 56837984 -46656990 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1018 3069 88 0 12 chr15 56838805 56839231 -46655743 + BGLII LTR ERVK 1 421 0 4 1018 2297 141 12 29 chr15 56839261 56839677 -46655297 + RLTR9E LTR ERVK 1 409 0 4 1018 1129 191 5 0 chr15 56839938 56840158 -46654816 + L1VL4 LINE L1 524 744 -5558 4 1018 1052 105 46 0 chr15 56840158 56840310 -46654664 + B2_Mm2 SINE B2 23 181 -14 4 1018 4015 177 25 3 chr15 56840314 56841320 -46653654 + L1_Mur1 LINE L1 1078 2104 -3782 4 1018 6372 156 41 17 chr15 56841318 56842861 -46652113 + Lx3C LINE L1 5384 6974 -2 4 1018 22 35 0 0 chr15 56842861 56842890 -46652084 + AT_rich Low_complexity Low_complexity 1 29 0 4 1018 1096 94 0 0 chr15 56843059 56843197 -46651777 - B1_Mus2 SINE Alu -9 138 1 4 1018 753 12 0 0 chr15 56843817 56843903 -46651071 + (TTC)n Simple_repeat Simple_repeat 2 87 0 4 1018 278 88 59 0 chr15 56844029 56844097 -46650877 + (TTTTTG)n Simple_repeat Simple_repeat 5 76 0 4 1018 3050 143 60 2 chr15 56844290 56844809 -46650165 + Lx2B LINE L1 6445 6993 -7 4 1018 286 236 55 14 chr15 56845132 56845205 -46649769 + ORR1E LTR MaLR 1 76 -283 4 1018 271 291 25 12 chr15 56845259 56845339 -46649635 + MTE2a LTR MaLR 18 98 -281 4 1018 660 277 110 84 chr15 56845341 56845443 -46649531 + MTE2a LTR MaLR 60 161 -218 4 1018 3258 207 115 43 chr15 56845443 56846286 -46648688 + RMER13B LTR ERVK 5 908 0 4 1018 660 277 110 84 chr15 56846286 56846482 -46648492 + MTE2a LTR MaLR 162 366 -13 4 1018 2411 180 19 7 chr15 56846866 56847331 -46647643 + L1_Mur2 LINE L1 5401 5871 -6 4 1018 1885 226 15 102 chr15 56847329 56847936 -46647038 + Lx5 LINE L1 6503 7054 -4 4 1018 652 259 111 25 chr15 56847940 56848138 -46646836 + MTD LTR MaLR 141 355 -64 4 1018 22 0 0 0 chr15 56848226 56848248 -46646726 + AT_rich Low_complexity Low_complexity 1 22 0 4 1018 390 335 109 6 chr15 56848475 56848658 -46646316 + MLT1E LTR MaLR 70 271 -382 4 1018 234 0 0 0 chr15 56849479 56849505 -46645469 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 1018 378 0 0 0 chr15 56849821 56849863 -46645111 + (CAA)n Simple_repeat Simple_repeat 1 42 0 4 1018 235 176 0 19 chr15 56850199 56850251 -46644723 + (TTTG)n Simple_repeat Simple_repeat 3 53 0 4 1018 1167 228 239 11 chr15 56850266 56850639 -46644335 + RMER20B LTR ERVK 1 458 -169 4 1018 264 240 73 61 chr15 56850646 56850681 -46644293 + L1MC LINE L1 5698 5733 -600 5 1018 457 311 22 17 chr15 56850681 56850861 -46644113 + B3A SINE B2 3 183 -15 5 1018 264 240 73 61 chr15 56850861 56850989 -46643985 + L1MC LINE L1 5734 5863 -470 5 1018 645 58 10 10 chr15 56851626 56851730 -46643244 - L1Md_F2 LINE L1 0 6582 6479 5 1018 31990 116 13 25 chr15 56851732 56857588 -46637386 - L1Md_F2 LINE L1 -20 5863 217 5 1018 829 311 64 14 chr15 56857619 56857978 -46636996 + MTE2a LTR MaLR 1 377 -2 5 1018 225 65 0 0 chr15 56858051 56858082 -46636892 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1018 4140 226 91 11 chr15 56858277 56859414 -46635560 + Lx5 LINE L1 5823 7049 -1 5 1018 393 335 114 41 chr15 56859451 56859722 -46635252 - ORR1E LTR MaLR -63 296 6 5 1018 548 109 22 0 chr15 56860011 56860103 -46634871 - L1_Mm LINE L1 -606 5277 5184 5 1018 520 126 9 64 chr15 56860098 56860208 -46634766 + L1_Mm LINE L1 5274 5377 -506 5 1018 1659 146 0 0 chr15 56860181 56860449 -46634525 + L1_Mm LINE L1 5485 5752 -131 5 1018 3224 36 3 3 chr15 56860449 56860840 -46634134 + L1Md_F3 LINE L1 6193 6583 -1 5 1018 5486 89 87 34 chr15 56860839 56861686 -46633288 + L1_Mus3 LINE L1 5739 6630 -8 5 1018 827 306 143 22 chr15 56861842 56862156 -46632818 - MTE2b LTR MaLR -17 362 11 5 1018 214 379 0 0 chr15 56863093 56863151 -46631823 + L2b LINE L2 3309 3366 -9 5 1018 498 128 0 0 chr15 56863352 56863446 -46631528 + (GA)n Simple_repeat Simple_repeat 1 94 0 5 1018 1493 78 0 0 chr15 56863511 56863717 -46631257 + L1Md_F2 LINE L1 6374 6579 -3 5 1018 446 295 83 46 chr15 56864616 56864833 -46630141 - MamRep605 Unknown Unknown -248 628 404 5 1018 25 65 0 0 chr15 56865503 56865549 -46629425 + AT_rich Low_complexity Low_complexity 1 46 0 5 1018 932 247 73 4 chr15 56865679 56865939 -46629035 + Lx7 LINE L1 7036 7313 -383 5 1018 223 279 100 67 chr15 56865955 56866105 -46628869 + L2a LINE L2 3271 3425 -1 5 1018 216 299 26 13 chr15 56866824 56866902 -46628072 - MIRb SINE MIR -57 211 133 5 1018 35 63 0 0 chr15 56867262 56867325 -46627649 + AT_rich Low_complexity Low_complexity 1 63 0 5 1018 4154 185 92 89 chr15 56870392 56871417 -46623557 + RLTR25B LTR ERVK 1 1028 0 5 1018 270 116 0 0 chr15 56872638 56872681 -46622293 + (TCCC)n Simple_repeat Simple_repeat 4 46 0 5 1018 501 17 0 0 chr15 56872794 56872852 -46622122 + (TTTC)n Simple_repeat Simple_repeat 4 61 0 5 1018 662 0 0 13 chr15 56873285 56873364 -46621610 + (GGAGA)n Simple_repeat Simple_repeat 3 80 0 5 1018 962 207 52 42 chr15 56873439 56873881 -46621093 + RMER10B LTR ERVL 6 398 0 5 1018 231 36 0 0 chr15 56873995 56874023 -46620951 + (TCTCCC)n Simple_repeat Simple_repeat 4 31 0 5 1018 636 207 75 31 chr15 56874071 56874282 -46620692 - RMER13B LTR ERVK -378 264 5 5 1018 303 348 126 119 chr15 56875042 56875319 -46619655 - MLT1E1 LTR MaLR -35 619 341 5 1018 21 0 0 0 chr15 56876028 56876049 -46618925 + AT_rich Low_complexity Low_complexity 1 21 0 5 1018 2293 125 0 3 chr15 56876321 56876667 -46618307 - Lx2 LINE L1 -1 6996 6652 5 1018 221 0 35 0 chr15 56876954 56876983 -46617991 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 5 1018 183 42 0 0 chr15 56877532 56877556 -46617418 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 5 1018 276 250 38 0 chr15 56878384 56878464 -46616510 + (TATG)n Simple_repeat Simple_repeat 1 83 0 5 1018 405 102 0 0 chr15 56878958 56879017 -46615957 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 5 1018 423 0 0 0 chr15 56879220 56879267 -46615707 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1018 1671 204 31 12 chr15 56879271 56879586 -46615388 - ORR1B1 LTR MaLR 0 394 74 5 1018 1517 193 43 31 chr15 56879586 56879912 -46615062 + RMER4A LTR ERVK 3 332 -134 5 1018 780 158 18 12 chr15 56879912 56879937 -46615037 + polypurine Low_complexity Low_complexity 3 27 0 5 1018 1023 57 5 43 chr15 56879937 56880122 -46614852 + (GGA)n Simple_repeat Simple_repeat 2 179 0 5 1018 780 158 18 12 chr15 56880122 56880262 -46614712 + GA-rich Low_complexity Low_complexity 28 169 0 5 1018 1293 171 38 30 chr15 56880262 56880527 -46614447 + RMER4A LTR ERVK 319 585 0 5 1018 456 119 0 0 chr15 56880527 56880594 -46614380 - ORR1B1 LTR MaLR -327 67 1 5 1018 21 0 0 0 chr15 56881960 56881981 -46612993 + AT_rich Low_complexity Low_complexity 1 21 0 5 1018 3383 185 40 16 chr15 56882265 56882907 -46612067 + Lx5 LINE L1 6379 7036 -14 5 1018 186 43 0 0 chr15 56882907 56882930 -46612044 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 5 1018 1953 263 62 11 chr15 56883061 56883607 -46611367 + Lx6 LINE L1 6832 7405 -55 5 127 409 417 56 33 chr15 56884986 56885323 -46609651 - LTR16D1 LTR ERVL -167 508 164 5 1019 25 0 0 0 chr15 56885476 56885501 -46609473 + AT_rich Low_complexity Low_complexity 1 25 0 5 1019 760 80 8 43 chr15 56886654 56886771 -46608203 + B1_Mus1 SINE Alu 36 148 0 5 1019 366 394 47 35 chr15 56890299 56890557 -46604417 - LTR16A LTR ERVL -17 434 174 5 1019 357 102 0 0 chr15 56891755 56891814 -46603160 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 1019 558 295 61 9 chr15 56891817 56892029 -46602945 + Lx8 LINE L1 6340 6562 -911 5 1019 1938 25 8 20 chr15 56892029 56892274 -46602700 - L1Md_F3 LINE L1 -3 6581 6340 5 1019 643 69 0 0 chr15 56892274 56892369 -46602605 + L1_Mm LINE L1 4210 4304 -1576 5 1019 341 320 44 10 chr15 56892810 56893015 -46601959 - L1M5 LINE L1 -596 5583 5372 5 1019 234 277 100 8 chr15 56893069 56893189 -46601785 - L1M5 LINE L1 -854 5292 5162 5 1019 318 26 0 0 chr15 56893503 56893542 -46601432 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 1019 305 296 101 10 chr15 56894264 56894571 -46600403 - L1M5 LINE L1 -2277 3869 3535 5 1019 443 311 52 7 chr15 56894861 56894997 -46599977 + RSINE1 SINE B4 11 152 -13 5 1019 268 299 69 58 chr15 56894997 56895035 -46599939 + B2_Mm2 SINE B2 10 185 -10 5 1019 1516 177 111 23 chr15 56895035 56895423 -46599551 + Lx9 LINE L1 7214 7635 -9 5 1019 29 0 0 0 chr15 56895670 56895699 -46599275 + AT_rich Low_complexity Low_complexity 1 29 0 5 1019 773 312 38 57 chr15 56896318 56896701 -46598273 + MTE2a LTR MaLR 18 404 -15 5 1019 231 36 0 0 chr15 56897133 56897161 -46597813 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 5 1019 236 357 78 36 chr15 56897212 56897404 -46597570 - MLT1G LTR MaLR -315 276 77 5 1019 319 273 89 18 chr15 56897466 56897578 -46597396 - MLT1A0 LTR MaLR -227 138 19 5 1019 24 32 0 0 chr15 56897659 56897690 -46597284 + AT_rich Low_complexity Low_complexity 1 31 0 5 1019 258 341 12 9 chr15 56898787 56898902 -46596072 + MIRb SINE MIR 54 176 -92 5 1019 357 119 29 29 chr15 56899225 56899294 -46595680 - RLTR25B LTR ERVK -200 828 760 5 1019 1155 179 10 20 chr15 56899400 56899599 -46595375 + RLTR25B LTR ERVK 832 1028 0 5 1019 2015 173 62 43 chr15 56900188 56900733 -46594241 - RLTR25A LTR ERVK -2 1101 72 5 1019 2701 234 50 21 chr15 56900733 56901601 -46593373 - Lx5 LINE L1 -630 6420 5501 5 1019 21 36 0 0 chr15 56901679 56901707 -46593267 + AT_rich Low_complexity Low_complexity 1 28 0 5 1019 404 207 11 44 chr15 56902398 56902489 -46592485 - B1_Mus2 SINE Alu -50 97 10 5 1019 2695 145 73 4 chr15 56903351 56903828 -46591146 + Lx2B LINE L1 5589 6098 -902 5 1019 326 275 11 11 chr15 56903874 56903966 -46591008 + Lx8 LINE L1 6152 6243 -1230 5 1019 25 0 0 0 chr15 56904365 56904390 -46590584 + AT_rich Low_complexity Low_complexity 1 25 0 5 1019 420 20 0 0 chr15 56904796 56904845 -46590129 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1019 193 333 131 0 chr15 56904987 56905071 -46589903 + MIR3 SINE MIR 110 204 -4 5 1019 207 0 0 0 chr15 56906092 56906115 -46588859 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1019 216 0 0 0 chr15 56908704 56908728 -46586246 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 1019 491 313 23 0 chr15 56908738 56908869 -46586105 - RSINE1 SINE B4 -26 139 6 5 1019 265 278 224 8 chr15 56909720 56909854 -46585120 - L1MA7 LINE L1 -85 6206 6044 5 1019 624 307 96 16 chr15 56909869 56910233 -46584741 - L1MA7 LINE L1 -523 5768 5376 5 1019 409 280 41 18 chr15 56910319 56910490 -46584484 - L1MA7 LINE L1 -865 5278 5104 5 1019 499 66 26 0 chr15 56910517 56910593 -46584381 + (TG)n Simple_repeat Simple_repeat 2 79 0 5 1019 549 277 83 2 chr15 56910602 56910860 -46584114 - L1MA7 LINE L1 -1542 4601 4324 5 1019 203 103 26 0 chr15 56912517 56912556 -46582418 + (CAAAAA)n Simple_repeat Simple_repeat 6 45 0 5 1019 246 107 54 0 chr15 56912785 56912841 -46582133 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 1019 3048 196 94 4 chr15 56913789 56914506 -46580468 + Lx4B LINE L1 5140 5928 -1130 5 1019 281 274 28 49 chr15 56914477 56914619 -46580355 + Lx6 LINE L1 7278 7416 -44 5 1019 261 0 0 0 chr15 56914619 56914648 -46580326 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 5 1019 269 292 21 43 chr15 56915650 56915743 -46579231 + B4A SINE B4 8 98 -194 5 1019 6881 174 23 42 chr15 56915744 56917114 -46577860 + Lx2B LINE L1 5654 6997 -3 5 1019 477 321 78 31 chr15 56917145 56917338 -46577636 + B4 SINE B4 83 284 -8 5 1019 2125 108 59 87 chr15 56917342 56917746 -46577228 - RLTR9C LTR ERVK 0 393 1 5 1019 189 0 0 0 chr15 56917764 56917785 -46577189 + (CAGA)n Simple_repeat Simple_repeat 4 24 0 5 1019 281 335 90 69 chr15 56917839 56918028 -46576946 - RMER15 LTR ERVL -12 563 371 5 1019 222 37 0 0 chr15 56919694 56919721 -46575253 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 5 1019 319 226 89 54 chr15 56920759 56920871 -46574103 - Charlie4a DNA MER1_type -192 316 201 5 1019 21 0 0 0 chr15 56921150 56921171 -46573803 + AT_rich Low_complexity Low_complexity 1 21 0 5 1019 1227 83 0 59 chr15 56922108 56922312 -46572662 + L1_Mus1 LINE L1 6376 6567 0 5 1019 207 0 0 0 chr15 56923074 56923097 -46571877 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1019 2154 133 65 3 chr15 56923194 56923547 -46571427 + Lx3B LINE L1 6596 6970 -3 5 1019 607 316 70 101 chr15 56923817 56924204 -46570770 - MTE2b LTR MaLR -4 375 1 5 1019 298 350 36 21 chr15 56925554 56925694 -46569280 - MLT1A0 LTR MaLR -214 151 10 5 1019 647 210 6 0 chr15 56926991 56927167 -46567807 + (TG)n Simple_repeat Simple_repeat 2 178 0 5 1019 513 152 0 0 chr15 56927461 56927566 -46567408 + (CA)n Simple_repeat Simple_repeat 2 106 0 5 1019 206 62 31 0 chr15 56927564 56927596 -46567378 + (CCA)n Simple_repeat Simple_repeat 3 35 0 6 1019 441 0 0 0 chr15 56928138 56928187 -46566787 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 6 1019 1202 242 137 29 chr15 56930589 56930989 -46563985 - L1_Rod LINE L1 -923 5374 4862 6 1019 2831 160 118 122 chr15 56930989 56931393 -46563581 + RMER6D LTR ERVK 1 334 -386 6 1019 540 0 0 0 chr15 56931393 56931453 -46563521 + (GA)n Simple_repeat Simple_repeat 1 60 0 6 1019 2831 160 118 122 chr15 56931453 56931767 -46563207 + RMER6D LTR ERVK 335 715 -5 6 1019 1202 248 172 38 chr15 56931767 56931888 -46563086 - L1_Rod LINE L1 -986 4861 4727 6 1019 895 228 62 0 chr15 56931892 56932103 -46562871 - URR1A DNA MER1_type 0 226 3 6 1019 1225 292 40 66 chr15 56932597 56933293 -46561681 + L1MA4 LINE L1 5254 5931 -369 6 1019 669 56 0 0 chr15 56933307 56933397 -46561577 + (TG)n Simple_repeat Simple_repeat 2 91 0 6 1019 539 204 0 49 chr15 56933683 56933827 -46561147 - Lx4B LINE L1 -4 7054 6918 6 1019 1419 249 47 18 chr15 56934768 56935169 -46559805 - MTD LTR MaLR -2 417 5 6 1019 21 0 0 0 chr15 56935751 56935772 -46559202 + AT_rich Low_complexity Low_complexity 1 21 0 6 1019 801 31 0 0 chr15 56935944 56936040 -46558934 + (TC)n Simple_repeat Simple_repeat 2 97 0 6 1019 24 32 0 0 chr15 56936843 56936874 -46558100 + AT_rich Low_complexity Low_complexity 1 31 0 6 1019 7674 50 16 0 chr15 56937074 56938024 -46556950 - L1_Mus1 LINE L1 -2 6565 5601 6 1019 384 312 0 0 chr15 56938789 56938869 -46556105 - B3A SINE B2 -80 118 39 6 1019 510 64 13 0 chr15 56938877 56938955 -46556019 - L1_Mus1 LINE L1 0 6567 6489 6 1019 1167 57 0 0 chr15 56938955 56939096 -46555878 - L1_Mus1 LINE L1 -283 6284 6144 6 1019 33 73 0 0 chr15 56939457 56939525 -46555449 + AT_rich Low_complexity Low_complexity 1 68 0 6 1019 243 0 0 0 chr15 56939757 56939784 -46555190 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1019 579 29 0 0 chr15 56939865 56939934 -46555040 + (TA)n Simple_repeat Simple_repeat 1 69 0 6 1019 897 331 42 29 chr15 56940145 56940624 -46554350 - Lx9 LINE L1 -223 7421 6937 6 1019 691 316 19 0 chr15 56940682 56940894 -46554080 - B3 SINE B2 0 216 1 6 1019 355 197 60 60 chr15 56941398 56941582 -46553392 - Lx9 LINE L1 -1 7643 7460 6 1019 810 31 0 0 chr15 56941621 56941718 -46553256 + (TAGA)n Simple_repeat Simple_repeat 2 98 0 6 1019 288 0 0 0 chr15 56941747 56941779 -46553195 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 1019 388 272 48 30 chr15 56942587 56942754 -46552220 + Lx8 LINE L1 7303 7472 -1 6 1019 225 94 0 0 chr15 56944179 56944211 -46550763 + (T)n Simple_repeat Simple_repeat 1 32 0 6 1019 544 294 16 0 chr15 56945561 56945687 -46549287 - B1F SINE Alu -10 139 12 6 1019 337 295 141 19 chr15 56945709 56945965 -46549009 - L1ME1 LINE L1 -324 5855 5569 6 1019 351 0 0 0 chr15 56946033 56946072 -46548902 + (T)n Simple_repeat Simple_repeat 1 39 0 6 1019 1079 88 7 0 chr15 56946072 56946219 -46548755 - B1_Mus1 SINE Alu 0 148 1 6 1019 373 318 102 51 chr15 56946382 56946551 -46548423 - L1ME1 LINE L1 -898 5248 5084 6 1019 1340 105 11 0 chr15 56946551 56946742 -46548232 + B2_Mm1t SINE B2 1 193 0 6 1019 373 318 102 51 chr15 56946742 56946966 -46548008 - L1ME1 LINE L1 -1063 5083 4835 6 1019 1074 67 0 0 chr15 56947271 56947405 -46547569 + B1_Mm SINE Alu 2 135 -12 6 1019 207 0 0 0 chr15 56947405 56947428 -46547546 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 6 1019 577 131 190 0 chr15 56948156 56948293 -46546681 - Lx3C LINE L1 -2 6974 6812 6 1019 238 267 11 0 chr15 56949273 56949363 -46545611 - L1M4 LINE L1 -868 5278 5188 6 1019 357 316 158 47 chr15 56949384 56949726 -46545248 - L1ME1 LINE L1 -1320 4826 4447 6 1019 1266 215 28 0 chr15 56950136 56950424 -46544550 + Lx3C LINE L1 5980 6275 -701 6 1019 2610 155 50 12 chr15 56950416 56951065 -46543909 + Lx5 LINE L1 5378 6051 -999 6 1019 822 21 0 0 chr15 56951070 56951166 -46543808 + (GA)n Simple_repeat Simple_repeat 1 96 0 6 1019 3230 226 70 3 chr15 56951202 56951859 -46543115 + Lx5 LINE L1 6334 7034 -16 6 1019 189 0 0 0 chr15 56951859 56951880 -46543094 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 6 1019 181 281 103 58 chr15 56952263 56952350 -46542624 - L3 LINE CR1 -99 4390 4300 6 1019 26 50 0 0 chr15 56952627 56952667 -46542307 + AT_rich Low_complexity Low_complexity 1 40 0 6 1019 449 311 79 20 chr15 56952919 56953122 -46541852 + L1MEc LINE L1 166 380 -6020 6 1019 1301 295 93 35 chr15 56953727 56954159 -46540815 + Lx8 LINE L1 6207 6663 -810 6 1019 822 258 48 37 chr15 56954192 56954572 -46540402 - BGLII_B LTR ERVK -9 432 6 6 1019 1420 283 124 26 chr15 56954581 56955192 -46539782 + Lx8 LINE L1 6687 7357 -116 6 1019 246 218 136 11 chr15 56955200 56955288 -46539686 + MTE2a LTR MaLR 273 371 -8 6 1019 958 94 19 0 chr15 56955848 56956008 -46538966 + (GAAA)n Simple_repeat Simple_repeat 2 164 0 6 1019 625 95 38 0 chr15 56956911 56957016 -46537958 + (TTTC)n Simple_repeat Simple_repeat 2 110 0 6 1019 5733 178 21 20 chr15 56957024 56958157 -46536817 - Lx4B LINE L1 0 7058 5925 6 1019 6218 135 85 7 chr15 56958157 56959325 -46535649 + Lx4A LINE L1 4622 5916 -1142 6 1019 1577 226 31 11 chr15 56959562 56959920 -46535054 + MT2A LTR ERVL 169 533 0 6 1019 32815 75 6 5 chr15 56961623 56966729 -46528245 + L1Md_F2 LINE L1 474 5586 -297 6 1019 7584 50 27 5 chr15 56966729 56967692 -46527282 + L1Md_F2 LINE L1 5587 6570 -12 6 1019 509 85 12 0 chr15 56968095 56968164 -46526810 + (GA)n Simple_repeat Simple_repeat 2 71 0 6 1019 846 98 0 0 chr15 56968164 56968286 -46526688 + (GGAA)n Simple_repeat Simple_repeat 4 125 0 6 1019 509 85 12 0 chr15 56968286 56968298 -46526676 + (GA)n Simple_repeat Simple_repeat 2 13 0 6 1019 7356 85 3 1 chr15 56968299 56969632 -46525342 + L1_Mus2 LINE L1 5229 6566 0 6 1019 1237 79 15 18 chr15 56969639 56969912 -46525062 + (GAAA)n Simple_repeat Simple_repeat 1 271 0 6 1019 221 333 51 34 chr15 56970987 56971105 -46523869 + MIRc SINE MIR 86 205 -63 6 1019 243 0 0 0 chr15 56972554 56972581 -46522393 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1019 249 33 0 0 chr15 56973555 56973585 -46521389 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 6 1019 2894 165 53 6 chr15 56973585 56974128 -46520846 - Lx4B LINE L1 -19 7039 6471 6 1019 3443 82 32 8 chr15 56974787 56975279 -46519695 + L1Md_F2 LINE L1 6078 6581 -1 6 1019 225 65 0 0 chr15 56975415 56975446 -46519528 + (A)n Simple_repeat Simple_repeat 1 31 0 6 1019 283 231 0 15 chr15 56975864 56975930 -46519044 - Arthur1C DNA Tip100 0 363 299 6 1019 210 118 0 0 chr15 56976389 56976423 -46518551 + (TCCA)n Simple_repeat Simple_repeat 4 37 0 6 1019 316 372 92 11 chr15 56976455 56976629 -46518345 - LTR16A LTR ERVL -19 432 245 6 1019 319 312 0 0 chr15 56976639 56976719 -46518255 - ID4 SINE ID -2 81 2 6 1019 275 0 0 28 chr15 56977555 56977591 -46517383 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 6 1019 27 29 0 0 chr15 56979377 56979411 -46515563 + AT_rich Low_complexity Low_complexity 1 34 0 6 1019 212 31 62 0 chr15 56979810 56979842 -46515132 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 1019 803 157 52 7 chr15 56979846 56979981 -46514993 - B1_Mur4 SINE Alu -8 142 2 6 1019 1125 226 12 19 chr15 56980236 56980493 -46514481 - Lx6 LINE L1 -27 7433 7179 6 1019 27 0 0 0 chr15 56981653 56981680 -46513294 + AT_rich Low_complexity Low_complexity 1 27 0 6 1019 3049 69 2 12 chr15 56982927 56983351 -46511623 + L1Md_F2 LINE L1 6163 6582 0 6 1019 2447 279 110 28 chr15 56983575 56984403 -46510571 + Lx6 LINE L1 6528 7423 -37 6 1019 738 327 122 8 chr15 56985176 56985438 -46509536 + B4A SINE B4 1 292 0 6 1019 417 298 91 8 chr15 56985589 56985721 -46509253 - RSINE1 SINE B4 -15 150 8 6 1019 186 43 0 0 chr15 56986032 56986055 -46508919 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 6 1019 25 0 0 0 chr15 56988217 56988242 -46506732 + AT_rich Low_complexity Low_complexity 1 25 0 6 1019 1158 67 11 38 chr15 56988402 56988587 -46506387 - L1_Mus3 LINE L1 -1 6637 6458 6 1019 551 86 37 0 chr15 56988588 56988669 -46506305 - L1_Mus3 LINE L1 -298 6340 6257 6 1019 2091 122 86 30 chr15 56988669 56988996 -46505978 + L1VL4 LINE L1 562 893 -5409 6 1019 7678 39 8 6 chr15 56988996 56989954 -46505020 + L1Md_F2 LINE L1 5621 6580 -2 6 1019 2091 88 72 6 chr15 56989954 56990153 -46504821 + L1VL4 LINE L1 894 1110 -2449 6 1019 319 25 0 0 chr15 56990182 56990222 -46504752 + L1_Mur1 LINE L1 1334 1373 -4513 6 1019 525 237 42 21 chr15 56990253 56990395 -46504579 + B1_Mur1 SINE Alu 4 148 -1 6 1019 509 323 38 54 chr15 56990495 56990849 -46504125 - Lx7 LINE L1 -1876 5820 5508 6 1019 402 21 0 0 chr15 56991704 56991751 -46503223 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 6 1019 22 35 0 0 chr15 56992620 56992649 -46502325 + AT_rich Low_complexity Low_complexity 1 29 0 6 1019 195 350 9 46 chr15 56993894 56994002 -46500972 - MIRb SINE MIR -96 172 69 6 1019 24 32 0 0 chr15 56996069 56996100 -46498874 + AT_rich Low_complexity Low_complexity 1 31 0 6 1019 5593 51 3 3 chr15 56996607 56997311 -46497663 - L1Md_F2 LINE L1 0 6582 5879 6 1019 246 308 37 28 chr15 56998550 56998657 -46496317 - MIR3 SINE MIR -35 173 66 6 1019 192 333 77 31 chr15 56999272 56999402 -46495572 - MIRb SINE MIR -45 223 88 6 1019 450 335 13 30 chr15 57000003 57000034 -46494940 - MT2A LTR ERVL -24 509 478 1 1019 294 50 0 0 chr15 57000034 57000074 -46494900 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1019 450 335 13 30 chr15 57000074 57000276 -46494698 - MT2A LTR ERVL -56 477 280 1 1019 334 338 59 15 chr15 57000381 57000516 -46494458 - MTEa LTR MaLR -238 141 1 3 1019 240 349 73 22 chr15 57000901 57001080 -46493894 + MLT2C1 LTR ERVL 22 209 -188 4 1019 249 33 0 0 chr15 57002426 57002456 -46492518 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 5 1019 248 257 54 0 chr15 57002540 57002614 -46492360 - B1_Mur1 SINE Alu -5 144 67 6 1019 1753 184 0 12 chr15 57003596 57003915 -46491059 + Lx4A LINE L1 6742 7056 -2 7 1019 21 0 0 0 chr15 57005411 57005432 -46489542 + AT_rich Low_complexity Low_complexity 1 21 0 8 1019 1251 194 62 75 chr15 57005695 57006002 -46488972 + ORR1D1 LTR MaLR 1 303 -71 9 1019 2757 195 56 14 chr15 57006094 57006806 -46488168 + L1_Mur3 LINE L1 3842 4583 -1297 1 1019 295 264 100 31 chr15 57007067 57007227 -46487747 - Lx7 LINE L1 -12 7684 7514 1 1019 292 290 14 51 chr15 57007228 57007366 -46487608 - Lx7 LINE L1 -328 7368 7236 1 1019 253 163 0 0 chr15 57007388 57007431 -46487543 - Lx8 LINE L1 -320 7153 7111 1 1019 189 237 0 0 chr15 57008523 57008582 -46486392 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 1019 286 209 14 0 chr15 57008687 57008826 -46486148 + (CA)n Simple_repeat Simple_repeat 2 142 0 1 1019 718 150 0 16 chr15 57008837 57009020 -46485954 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1019 1299 38 0 0 chr15 57009549 57009708 -46485266 + B2_Mm1a SINE B2 2 160 -33 1 1019 315 0 0 0 chr15 57009708 57009743 -46485231 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 1 1019 1062 142 0 16 chr15 57009743 57009769 -46485205 + B2_Mm2 SINE B2 159 184 -11 1 1019 870 59 8 0 chr15 57010351 57010470 -46484504 - B1_Mus2 SINE Alu 0 147 28 1 1019 432 0 0 0 chr15 57011332 57011380 -46483594 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1019 717 302 88 25 chr15 57012580 57012945 -46482029 + MLT1A1 LTR MaLR 1 386 -22 2 1019 1072 92 0 0 chr15 57013075 57013216 -46481758 + B1_Mus1 SINE Alu 2 142 -6 2 1019 276 30 0 0 chr15 57013642 57013675 -46481299 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 2 1019 11395 49 11 0 chr15 57013708 57015801 -46479173 - L1Md_F2 LINE L1 -4 6578 4462 2 1019 2498 45 0 0 chr15 57015800 57016114 -46478860 + L1Md_F2 LINE L1 4164 4477 -1406 2 1019 882 42 0 8 chr15 57016112 57016233 -46478741 - L1Md_F2 LINE L1 -23 6559 6440 2 127 769 249 139 27 chr15 57016246 57016577 -46478397 - RLTR9A LTR ERVK 0 368 1 2 1020 375 119 0 0 chr15 57016597 57016664 -46478310 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1020 536 65 13 0 chr15 57017151 57017228 -46477746 + (GA)n Simple_repeat Simple_repeat 2 79 0 2 1020 271 266 17 42 chr15 57017545 57017663 -46477311 + (CATATA)n Simple_repeat Simple_repeat 2 116 0 2 1020 1696 129 0 4 chr15 57017664 57017912 -46477062 + ORR1A2 LTR MaLR 1 247 -80 2 1020 1416 64 0 5 chr15 57017906 57018095 -46476879 + ORR1A2 LTR MaLR 213 400 0 2 1020 437 280 32 0 chr15 57018650 57018775 -46476199 + ORR1E LTR MaLR 10 138 -221 3 1020 180 0 0 0 chr15 57019314 57019334 -46475640 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 1020 657 38 0 0 chr15 57019348 57019428 -46475546 + (TA)n Simple_repeat Simple_repeat 2 81 0 3 1020 909 287 37 85 chr15 57020545 57020922 -46474052 + MTE2a LTR MaLR 21 379 0 3 1020 812 311 21 63 chr15 57021895 57022180 -46472794 - MTEa LTR MaLR -101 278 6 3 1020 306 0 0 0 chr15 57022229 57022263 -46472711 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1020 406 308 147 4 chr15 57022521 57022759 -46472215 + Lx9 LINE L1 7220 7491 -153 3 1020 376 188 133 20 chr15 57022801 57022899 -46472075 + L1VL1 LINE L1 157 265 -6157 3 1020 31679 85 7 11 chr15 57022877 57027965 -46467009 + L1Md_F2 LINE L1 519 5586 -297 3 1020 7194 81 2 27 chr15 57027966 57028974 -46466000 + L1Md_F2 LINE L1 5588 6570 -12 3 1020 22 35 0 0 chr15 57029532 57029561 -46465413 + AT_rich Low_complexity Low_complexity 1 29 0 3 1020 21 0 0 0 chr15 57029613 57029634 -46465340 + AT_rich Low_complexity Low_complexity 1 21 0 4 1020 1425 126 0 0 chr15 57029663 57029870 -46465104 + Lx3C LINE L1 6331 6537 -439 4 1020 282 29 0 0 chr15 57031167 57031202 -46463772 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1020 23150 94 7 2 chr15 57031291 57035295 -46459679 - L1_Mus1 LINE L1 -1 6566 2542 4 1020 218 345 42 42 chr15 57037594 57037712 -46457262 - L2c LINE L2 0 3387 3270 4 1020 252 0 0 0 chr15 57037933 57037961 -46457013 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 1020 2237 282 19 19 chr15 57037973 57038547 -46456427 - Lx5 LINE L1 -22 7028 6455 4 1020 251 228 18 0 chr15 57038556 57038613 -46456361 - Lx6 LINE L1 -738 6722 6665 4 1020 950 94 85 36 chr15 57039405 57039570 -46455404 + B2_Mm2 SINE B2 8 180 -15 4 1020 22842 134 50 7 chr15 57039573 57042038 -46452936 + L1VL4 LINE L1 368 2874 -3009 4 1020 1191 74 0 17 chr15 57042038 57042217 -46452757 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 5 1020 22842 153 71 11 chr15 57042217 57044977 -46449997 + L1VL4 LINE L1 2875 5874 -9 4 1020 3048 157 31 16 chr15 57045007 57045558 -46449416 + Lx LINE L1 6096 6654 0 5 1020 359 204 2 72 chr15 57045586 57045700 -46449274 + L1MB3 LINE L1 5769 5875 -308 5 1020 22 0 0 0 chr15 57045927 57045949 -46449025 + AT_rich Low_complexity Low_complexity 1 22 0 5 1020 203 246 0 0 chr15 57046081 57046146 -46448828 + A-rich Low_complexity Low_complexity 1 65 0 5 1020 389 320 153 42 chr15 57046430 57046619 -46448355 + ID_B1 SINE B4 8 217 -7 5 1020 428 324 49 21 chr15 57046716 57046858 -46448116 + RSINE1 SINE B4 4 149 -16 5 1020 405 58 0 0 chr15 57046868 57046920 -46448054 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 1020 508 58 11 11 chr15 57047028 57047115 -46447859 - L1_Mus2 LINE L1 -1 6565 6479 5 1020 996 86 12 6 chr15 57047514 57047677 -46447297 + (TC)n Simple_repeat Simple_repeat 1 164 0 5 1020 4184 105 17 0 chr15 57047906 57048507 -46446467 - Lx2 LINE L1 -291 6706 6096 6 1020 1709 147 8 0 chr15 57048502 57048768 -46446206 + Lx2 LINE L1 6688 6955 -42 6 1020 360 0 0 0 chr15 57049794 57049834 -46445140 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1020 295 338 59 66 chr15 57050679 57050967 -46444007 + L1M4b LINE L1 931 1216 -6118 6 1020 397 303 131 35 chr15 57051225 57051454 -46443520 + B4A SINE B4 42 292 0 6 1020 299 323 94 0 chr15 57051571 57051794 -46443180 + L1M4b LINE L1 5873 6116 -890 6 1020 1601 251 22 89 chr15 57051847 57052028 -46442946 + RLTR18 LTR ERVK 15 191 -425 6 1020 1114 202 28 0 chr15 57052028 57052246 -46442728 + URR1B DNA MER1_type 1 224 -1 6 1020 1601 251 22 89 chr15 57052246 57052558 -46442416 + RLTR18 LTR ERVK 192 475 -141 6 1020 24 24 0 24 chr15 57052588 57052606 -46442368 + AT_rich Low_complexity Low_complexity 1 18 0 6 1020 3776 62 0 12 chr15 57052606 57053098 -46441876 - L1Md_F2 LINE L1 -17 6565 6080 6 1020 24 24 0 24 chr15 57053098 57053121 -46441853 + AT_rich Low_complexity Low_complexity 1 23 0 6 1020 408 340 133 30 chr15 57053184 57053814 -46441160 - L1M4 LINE L1 -3134 3012 2318 6 1020 244 192 110 49 chr15 57053838 57053920 -46441054 - L1M4 LINE L1 -3845 2295 2209 6 1020 308 321 36 22 chr15 57053977 57054114 -46440860 - MER58B DNA MER1_type -8 333 195 7 1020 379 181 87 25 chr15 57054149 57054318 -46440656 - L1MEf LINE L1 -4059 2341 2164 7 1020 774 219 106 5 chr15 57054688 57054876 -46440098 + B3 SINE B2 4 210 -6 7 1020 487 287 79 54 chr15 57056007 57056374 -46438600 - RMER20A LTR ERVK -22 605 229 7 1020 567 305 165 26 chr15 57056843 57057730 -46437244 + L1MA8 LINE L1 4422 5447 -844 7 1020 1217 69 75 0 chr15 57057909 57058059 -46436915 + B2_Mm2 SINE B2 1 152 -43 7 1020 456 19 0 0 chr15 57058059 57058112 -46436862 + (TA)n Simple_repeat Simple_repeat 2 54 0 7 1020 1217 69 75 0 chr15 57058112 57058134 -46436840 + B2_Mm2 SINE B2 153 185 -10 7 1020 1141 302 49 37 chr15 57058173 57058848 -46436126 + L1MA8 LINE L1 5519 6201 -90 7 1020 423 327 41 90 chr15 57059157 57059500 -46435474 - L1M2 LINE L1 -3560 2583 2258 7 1020 342 0 0 0 chr15 57059519 57059557 -46435417 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1020 262 217 17 109 chr15 57059563 57059682 -46435292 - L1M2 LINE L1 -3956 2187 2077 7 1020 210 91 0 0 chr15 57059753 57059786 -46435188 + (T)n Simple_repeat Simple_repeat 1 33 0 7 1020 636 58 25 126 chr15 57060149 57060347 -46434627 + (TA)n Simple_repeat Simple_repeat 2 179 0 8 1020 606 281 7 29 chr15 57061122 57061261 -46433713 + RSINE1 SINE B4 3 138 -27 8 1020 263 389 63 46 chr15 57061346 57061521 -46433453 - LTR41B LTR ERVL -97 661 484 8 1020 180 0 0 0 chr15 57062072 57062092 -46432882 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 8 1020 275 290 36 95 chr15 57062101 57062238 -46432736 - LTR41 LTR ERVL -549 219 91 8 1020 606 331 0 13 chr15 57063408 57063564 -46431410 + RSINE1 SINE B4 12 165 0 8 1020 30 27 0 0 chr15 57064215 57064252 -46430722 + AT_rich Low_complexity Low_complexity 1 37 0 8 1020 5282 250 37 53 chr15 57064335 57064916 -46430058 - Lx6 LINE L1 -10 7450 6882 8 1020 441 0 0 0 chr15 57064916 57064965 -46430009 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 1020 5282 250 37 53 chr15 57064965 57064989 -46429985 - Lx6 LINE L1 -579 6881 6875 8 1020 477 0 0 0 chr15 57064989 57065042 -46429932 + (TC)n Simple_repeat Simple_repeat 2 54 0 8 1020 459 0 0 0 chr15 57065042 57065092 -46429882 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 1020 5282 250 37 53 chr15 57065092 57065920 -46429054 - Lx6 LINE L1 -586 6874 6039 8 1020 26818 105 50 18 chr15 57065945 57070373 -46424601 - L1_Mus1 LINE L1 0 6567 1935 9 1020 237 33 0 0 chr15 57070373 57070403 -46424571 + RLTR10 LTR ERVK 361 390 0 9 1020 26818 105 50 18 chr15 57070403 57070561 -46424413 - L1_Mus1 LINE L1 0 1934 1768 9 1020 947 28 0 0 chr15 57070561 57070668 -46424306 - U6 snRNA snRNA 0 107 1 9 1020 26818 186 47 82 chr15 57070668 57072347 -46422627 - L1_Mus1 LINE L1 -4116 1767 220 9 1020 634 274 81 14 chr15 57072352 57072563 -46422411 - Lx6 LINE L1 -1420 6040 5816 8 1020 21 0 0 0 chr15 57073014 57073035 -46421939 + AT_rich Low_complexity Low_complexity 1 21 0 9 1020 895 261 76 38 chr15 57073216 57073596 -46421378 + MYSERV-int LTR ERVK 3913 4201 -4758 9 1020 263 260 0 40 chr15 57073808 57073884 -46421090 + A-rich Low_complexity Low_complexity 3 75 0 9 1020 392 0 21 0 chr15 57074135 57074183 -46420791 + (TC)n Simple_repeat Simple_repeat 2 50 0 9 1020 359 21 21 0 chr15 57074218 57074266 -46420708 + (TG)n Simple_repeat Simple_repeat 2 50 0 9 1020 21 0 0 0 chr15 57075664 57075685 -46419289 + AT_rich Low_complexity Low_complexity 1 21 0 9 1020 4222 26 0 2 chr15 57075770 57076264 -46418710 + L1Md_A LINE L1 6089 6581 -1 1 1020 24 77 0 0 chr15 57077002 57077054 -46417920 + AT_rich Low_complexity Low_complexity 1 52 0 1 1020 295 121 0 33 chr15 57077340 57077400 -46417574 + GA-rich Low_complexity Low_complexity 3 60 0 1 1020 198 143 0 0 chr15 57078246 57078281 -46416693 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1020 2446 162 17 2 chr15 57078326 57078741 -46416233 + MTC LTR MaLR 1 421 0 1 1020 341 308 41 0 chr15 57078741 57078887 -46416087 + L1M2 LINE L1 2571 2722 -3421 1 1020 578 188 81 70 chr15 57079227 57079399 -46415575 - Lx7 LINE L1 0 7696 7523 1 1020 283 259 35 0 chr15 57079449 57079565 -46415409 + L1M2 LINE L1 3960 4079 -2061 1 1020 232 273 92 59 chr15 57079577 57079659 -46415315 + L1M2 LINE L1 5184 5278 -862 1 1020 1270 94 28 0 chr15 57079659 57079840 -46415134 + B2_Mm2 SINE B2 2 187 -8 1 1020 232 273 92 59 chr15 57079840 57079909 -46415065 + L1M2 LINE L1 5279 5340 -800 1 1020 1201 216 122 59 chr15 57079992 57080369 -46414605 + RMER13B LTR ERVK 474 876 -32 1 1020 180 0 0 0 chr15 57080369 57080389 -46414585 + (CAGAG)n Simple_repeat Simple_repeat 5 24 0 1 1020 1201 216 122 59 chr15 57080389 57080420 -46414554 + RMER13B LTR ERVK 877 907 -1 1 1020 318 106 0 0 chr15 57080674 57080721 -46414253 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 1020 493 280 81 23 chr15 57080771 57080943 -46414031 + B3A SINE B2 1 182 -16 1 1020 23 33 0 0 chr15 57080968 57080998 -46413976 + AT_rich Low_complexity Low_complexity 1 30 0 1 1020 570 51 0 0 chr15 57081387 57081465 -46413509 + (TG)n Simple_repeat Simple_repeat 2 79 0 1 1020 21 57 0 0 chr15 57081481 57081516 -46413458 + AT_rich Low_complexity Low_complexity 1 35 0 1 1020 578 280 37 31 chr15 57082678 57082840 -46412134 + RSINE1 SINE B4 3 165 0 1 1020 1766 185 137 19 chr15 57083302 57083408 -46411566 - RMER1C Other Other 0 1342 1192 1 1020 885 107 0 0 chr15 57083408 57083539 -46411435 + (GAA)n Simple_repeat Simple_repeat 1 131 0 1 1020 1766 185 137 19 chr15 57083539 57083856 -46411118 - RMER1C Other Other -151 1191 869 1 1020 253 167 72 132 chr15 57083848 57083931 -46411043 - Lx9 LINE L1 -217 7427 7350 1 1020 291 218 299 0 chr15 57084206 57084319 -46410655 + Lx7 LINE L1 5612 5752 -95 1 1020 1791 107 0 24 chr15 57084313 57084601 -46410373 + MusHAL1 LINE L1 809 1089 -1623 1 1020 263 89 0 22 chr15 57084597 57084643 -46410331 + Lx7 LINE L1 5779 5823 -1821 1 1020 2995 250 85 24 chr15 57084676 57085594 -46409380 + Lx9 LINE L1 6656 7629 -15 1 1020 335 105 18 0 chr15 57086894 57086951 -46408023 + (TTTCG)n Simple_repeat Simple_repeat 4 61 0 1 1020 1156 187 165 12 chr15 57086986 57087235 -46407739 - MTD LTR MaLR -132 287 1 1 1020 219 125 0 0 chr15 57087248 57087288 -46407686 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 1 1020 810 57 0 0 chr15 57087289 57087394 -46407580 - B1_Mus2 SINE Alu -1 146 42 1 1020 262 158 69 59 chr15 57087337 57087438 -46407536 - RLTR25B LTR ERVK -530 498 397 1 1020 468 236 0 0 chr15 57087529 57087707 -46407267 + CT-rich Low_complexity Low_complexity 2 179 0 1 1020 332 102 16 33 chr15 57087750 57087811 -46407163 - B1_Mus1 SINE Alu -88 60 1 1 1020 827 144 75 7 chr15 57087811 57087957 -46407017 - B2_Mm2 SINE B2 -38 157 2 1 1020 528 121 0 0 chr15 57088447 57088538 -46406436 + (TG)n Simple_repeat Simple_repeat 2 92 0 1 1020 282 297 47 0 chr15 57088591 57088655 -46406319 - B3 SINE B2 -149 67 1 1 1020 4302 65 2 12 chr15 57088810 57089374 -46405600 - L1_Mus1 LINE L1 -2 6565 6008 1 1020 3750 104 6 2 chr15 57089384 57089946 -46405028 + L1_Mm LINE L1 4861 5460 -664 1 1020 234 0 0 0 chr15 57090594 57090620 -46404354 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1020 22 70 0 0 chr15 57090753 57090796 -46404178 + AT_rich Low_complexity Low_complexity 1 43 0 1 1020 437 261 25 16 chr15 57090906 57091027 -46403947 + Lx8 LINE L1 6724 6845 -628 1 1020 4153 217 70 93 chr15 57091034 57091422 -46403552 + RMER12 LTR ERVK 1 386 -936 1 1020 1169 75 0 0 chr15 57091422 57091569 -46403405 + B1_Mus1 SINE Alu 2 148 0 1 1020 4153 217 70 93 chr15 57091569 57092230 -46402744 + RMER12 LTR ERVK 387 1007 -315 1 1020 501 17 0 0 chr15 57092230 57092288 -46402686 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1020 4153 217 70 93 chr15 57092288 57092489 -46402485 + RMER12 LTR ERVK 1008 1221 -101 1 1020 387 346 56 18 chr15 57092692 57093098 -46401876 - Lx7 LINE L1 -1518 6178 5760 1 1020 790 262 9 28 chr15 57093265 57093477 -46401497 + Lx8 LINE L1 6585 6792 -681 1 1020 697 241 108 32 chr15 57093484 57093740 -46401234 + ORR1D1 LTR MaLR 12 317 -57 1 1020 1747 64 0 0 chr15 57093743 57093963 -46401011 - L1_Mus1 LINE L1 -2 6565 6346 1 1020 1223 70 99 0 chr15 57093963 57094134 -46400840 + L1_Mus1 LINE L1 6108 6295 -272 1 1020 367 206 9 21 chr15 57094134 57094243 -46400731 + ORR1D1 LTR MaLR 280 414 -5 1 1020 349 250 21 11 chr15 57094249 57094342 -46400632 + Lx8 LINE L1 6794 6887 -586 1 1020 429 54 0 0 chr15 57094660 57094716 -46400258 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 1020 21 0 0 0 chr15 57095299 57095320 -46399654 + AT_rich Low_complexity Low_complexity 1 21 0 1 1020 700 299 45 42 chr15 57095606 57095941 -46399033 + Lx9 LINE L1 7168 7503 -141 1 1020 21 36 0 0 chr15 57096352 57096380 -46398594 + AT_rich Low_complexity Low_complexity 1 28 0 1 1020 329 357 0 0 chr15 57097205 57097317 -46397657 - Lx8 LINE L1 -141 7332 7221 1 1020 2658 229 18 28 chr15 57098237 57099049 -46395925 + Lx9 LINE L1 5260 6102 -1542 1 1020 459 0 0 0 chr15 57099750 57099801 -46395173 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1020 270 0 0 0 chr15 57099801 57099830 -46395144 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1020 342 271 49 0 chr15 57099889 57100011 -46394963 + Lx7 LINE L1 7569 7696 0 1 1020 200 167 0 0 chr15 57100092 57100122 -46394852 + polypurine Low_complexity Low_complexity 4 33 0 1 1020 267 31 0 0 chr15 57100478 57100510 -46394464 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 1020 890 144 0 22 chr15 57100776 57100960 -46394014 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 1020 221 75 25 0 chr15 57101859 57101899 -46393075 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1020 428 342 19 51 chr15 57101908 57102065 -46392909 - RSINE1 SINE B4 -11 154 3 1 1020 365 357 119 12 chr15 57102176 57102420 -46392554 + L2 LINE L2 1887 2156 -1263 1 1020 933 147 18 0 chr15 57105652 57105815 -46389159 - L1_Mur2 LINE L1 -558 5319 5154 1 1020 570 112 57 49 chr15 57105815 57105937 -46389037 + Lx LINE L1 6532 6654 0 1 1020 4043 113 70 20 chr15 57106208 57106937 -46388037 + RMER17A LTR ERVK 1 751 0 1 1020 375 78 0 0 chr15 57107128 57107179 -46387795 + (CATA)n Simple_repeat Simple_repeat 2 52 0 1 1020 573 150 0 0 chr15 57107370 57107470 -46387504 + Lx9 LINE L1 7538 7637 -7 1 1020 256 361 36 45 chr15 57107674 57107897 -46387077 - MLT1C LTR MaLR -237 230 10 1 1020 379 280 32 8 chr15 57108161 57108287 -46386687 - LTR85a LTR Gypsy? -44 658 530 1 1020 335 244 112 65 chr15 57108461 57108693 -46386281 + LTR37A LTR ERV1 184 426 0 1 1020 226 315 85 46 chr15 57110166 57110319 -46384655 + RMER15 LTR ERVL 266 424 -151 1 1020 33714 47 0 4 chr15 57110661 57116098 -46378876 + L1Md_T LINE L1 77 5589 -297 1 1020 8445 33 1 0 chr15 57116098 57117093 -46377881 + L1Md_T LINE L1 5590 6585 0 1 1020 259 237 194 0 chr15 57117188 57117281 -46377693 - RMER15 LTR ERVL -43 532 422 1 1020 34 99 0 0 chr15 57117451 57117562 -46377412 + AT_rich Low_complexity Low_complexity 1 111 0 1 1020 23 33 0 0 chr15 57117703 57117733 -46377241 + AT_rich Low_complexity Low_complexity 1 30 0 1 1020 791 322 13 98 chr15 57118289 57118308 -46376666 + ORR1E LTR MaLR 1 17 -342 1 1020 1223 196 51 109 chr15 57118308 57118703 -46376271 - ORR1D1 LTR MaLR -2 372 1 1 1020 791 322 13 98 chr15 57118703 57119000 -46375974 + ORR1E LTR MaLR 18 290 -69 1 1020 411 21 0 0 chr15 57119005 57119053 -46375921 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 1020 554 75 12 0 chr15 57119053 57119133 -46375841 + (GAA)n Simple_repeat Simple_repeat 3 83 0 1 1020 366 80 0 0 chr15 57119609 57119659 -46375315 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 1020 26 0 0 0 chr15 57120839 57120865 -46374109 + AT_rich Low_complexity Low_complexity 1 26 0 1 1020 226 333 196 48 chr15 57121086 57121275 -46373699 + MIRb SINE MIR 20 236 -32 1 1020 279 0 0 0 chr15 57121472 57121503 -46373471 + (TAA)n Simple_repeat Simple_repeat 3 33 0 1 1020 735 313 5 19 chr15 57122398 57122603 -46372371 - B3 SINE B2 -3 213 12 1 1020 14877 88 2 8 chr15 57122673 57126250 -46368724 + L1_Mus4 LINE L1 98 3334 -2549 1 1020 9091 77 9 137 chr15 57126253 57127436 -46367538 + L1_Mus4 LINE L1 4391 5586 -297 1 1020 7857 46 21 1 chr15 57127436 57128412 -46366562 + L1Md_F2 LINE L1 5587 6582 0 1 1020 9091 88 16 58 chr15 57128412 57129655 -46365319 + L1_Mus4 LINE L1 5587 6618 -18 1 1020 388 399 45 5 chr15 57130112 57130336 -46364638 + LTR16A LTR ERVL 160 392 -59 1 1020 2051 158 14 89 chr15 57130462 57130887 -46364087 - RLTR9C LTR ERVK 0 393 1 1 1020 23 0 0 0 chr15 57130898 57130921 -46364053 + AT_rich Low_complexity Low_complexity 1 23 0 1 1020 200 200 20 0 chr15 57131165 57131215 -46363759 + GA-rich Low_complexity Low_complexity 1 51 0 1 1020 288 297 75 55 chr15 57132622 57132779 -46362195 - MIR SINE MIR -94 168 22 1 1020 339 57 96 41 chr15 57132845 57132918 -46362056 + Lx3B LINE L1 6131 6207 -766 1 1020 858 321 21 31 chr15 57133108 57133394 -46361580 + B4 SINE B4 6 288 -4 1 1020 7939 153 21 13 chr15 57135622 57137374 -46357600 - Lx4B LINE L1 -19 7039 5268 1 1020 16665 124 44 25 chr15 57137374 57138448 -46356526 - Lx4B LINE L1 -1295 4582 3485 1 1020 414 0 0 0 chr15 57138448 57138494 -46356480 + (GTTTG)n Simple_repeat Simple_repeat 5 50 0 1 1020 16665 124 44 25 chr15 57138494 57140566 -46354408 - Lx4B LINE L1 -2393 3484 1376 1 1020 933 135 94 11 chr15 57140578 57140758 -46354216 - Lx3C LINE L1 -1 6975 6781 1 1020 2592 112 17 19 chr15 57140760 57141170 -46353804 + RLTR9E LTR ERVK 1 409 0 1 1020 729 276 61 42 chr15 57141171 57141550 -46353424 + ETnERV2-int LTR ERVK 2 387 -2927 1 1020 4667 133 76 34 chr15 57141560 57142086 -46352888 + ETnERV2-int LTR ERVK 1071 1624 -5782 1 1020 278 26 0 25 chr15 57142086 57142126 -46352848 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1020 4667 133 76 34 chr15 57142126 57142574 -46352400 + ETnERV2-int LTR ERVK 1625 2085 -5321 1 1020 5089 132 50 13 chr15 57142598 57143579 -46351395 + ETnERV2-int LTR ERVK 1995 3448 -3958 1 1020 2668 119 29 5 chr15 57143823 57144269 -46350705 + ETnERV2-int LTR ERVK 3441 3897 -3509 1 1020 531 217 28 69 chr15 57144272 57144531 -46350443 + ETnERV2-int LTR ERVK 2696 2818 -2026 1 1020 1189 184 34 35 chr15 57144529 57145061 -46349913 + ETnERV2-int LTR ERVK 6238 6429 -977 1 1020 363 75 56 56 chr15 57145154 57145225 -46349749 + RLTR45-int LTR ERVK 6002 6072 -1172 1 1020 1473 164 0 4 chr15 57145238 57145495 -46349479 + ETnERV3-int LTR ERVK 5529 5784 -24 1 1020 1627 174 51 8 chr15 57145504 57145970 -46349004 + RLTR13D6 LTR ERVK 1 539 -363 1 1020 494 66 0 50 chr15 57145970 57146050 -46348924 + ETnERV2-int LTR ERVK 7331 7406 0 1 1020 2803 95 20 17 chr15 57146050 57146458 -46348516 + RLTR9E LTR ERVK 1 409 0 1 1020 2602 160 73 14 chr15 57146458 57146978 -46347996 - Lx3C LINE L1 -192 6784 6234 1 1020 706 275 36 92 chr15 57147184 57147360 -46347614 + B3A SINE B2 1 172 -26 1 127 339 65 0 0 chr15 57147360 57147406 -46347568 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1021 463 275 36 92 chr15 57147406 57147425 -46347549 + B2_Mm2 SINE B2 170 185 -10 1 1021 720 53 16 103 chr15 57147684 57147810 -46347164 - RLTRETN_Mm LTR ERVK -207 115 1 2 1021 354 351 64 16 chr15 57147880 57148068 -46346906 - MER58B DNA MER1_type -144 197 1 2 1021 22 0 0 0 chr15 57148450 57148472 -46346502 + AT_rich Low_complexity Low_complexity 1 22 0 2 1021 1009 89 13 6 chr15 57148756 57148915 -46346059 - L1_Mus3 LINE L1 0 6638 6479 2 1021 2617 56 0 0 chr15 57148915 57149253 -46345721 + L1_Mus3 LINE L1 6131 6468 -170 2 1021 234 188 93 80 chr15 57149253 57149328 -46345646 - MER103 DNA DNA -80 86 11 2 1021 254 160 28 113 chr15 57149330 57149436 -46345538 - Lx9 LINE L1 -16 7628 7532 2 1021 446 293 7 54 chr15 57149779 57149927 -46345047 + B3A SINE B2 58 198 0 2 1021 328 230 192 31 chr15 57150399 57150529 -46344445 - MTEa LTR MaLR 0 379 229 2 1021 561 219 0 0 chr15 57150530 57150644 -46344330 + Lx7 LINE L1 6890 7003 -693 2 1021 656 222 116 56 chr15 57150640 57150855 -46344119 + Lx6 LINE L1 7064 7291 -169 2 1021 201 133 0 0 chr15 57150856 57150886 -46344088 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 2 1021 241 336 32 0 chr15 57150923 57151048 -46343926 + Lx7 LINE L1 7193 7321 -375 2 1021 22 56 0 0 chr15 57151232 57151268 -46343706 + AT_rich Low_complexity Low_complexity 1 36 0 2 1021 21 0 0 0 chr15 57151274 57151295 -46343679 + AT_rich Low_complexity Low_complexity 1 21 0 2 1021 225 250 154 0 chr15 57151297 57151433 -46343541 - L1MC LINE L1 -999 5147 4991 2 1021 27 0 0 0 chr15 57151447 57151474 -46343500 + AT_rich Low_complexity Low_complexity 1 27 0 2 1021 208 163 23 0 chr15 57152232 57152275 -46342699 + GA-rich Low_complexity Low_complexity 1 44 0 2 1021 899 124 100 6 chr15 57152666 57152836 -46342138 - Lx LINE L1 -7 6647 6462 2 1021 8933 208 172 19 chr15 57152837 57157475 -46337499 - L1VL2 LINE L1 -152 5734 362 2 1021 234 337 29 19 chr15 57157836 57157939 -46337035 - LTR16A1 LTR ERVL -8 448 345 2 1021 2659 300 76 19 chr15 57158311 57159440 -46335534 + Lx8 LINE L1 6265 7457 -16 2 1021 369 294 0 16 chr15 57159559 57159680 -46335294 + L1MB1 LINE L1 5829 5947 -221 2 1021 248 342 68 34 chr15 57160246 57160364 -46334610 - L2a LINE L2 -33 3393 3272 2 1021 780 243 115 22 chr15 57160578 57160856 -46334118 - Lx9 LINE L1 -687 6957 6654 2 1021 708 319 99 38 chr15 57161040 57161486 -46333488 + Lx8 LINE L1 6941 7413 -60 2 1021 360 0 0 0 chr15 57161522 57161562 -46333412 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1021 294 258 0 0 chr15 57162051 57162140 -46332834 + (TG)n Simple_repeat Simple_repeat 2 90 0 2 1021 476 251 6 0 chr15 57162169 57162340 -46332634 + (TG)n Simple_repeat Simple_repeat 1 172 0 2 1021 281 282 8 0 chr15 57162354 57162478 -46332496 + (TG)n Simple_repeat Simple_repeat 2 126 0 2 1021 372 22 0 0 chr15 57162686 57162731 -46332243 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1021 186 191 0 0 chr15 57163431 57163473 -46331501 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1021 383 287 36 54 chr15 57163980 57164146 -46330828 + RSINE1 SINE B4 3 165 0 2 1021 355 290 9 83 chr15 57164724 57164833 -46330141 - MTEa LTR MaLR -278 101 1 2 1021 347 200 88 0 chr15 57165159 57165239 -46329735 - Lx9 LINE L1 -649 6995 6909 2 1021 411 346 45 8 chr15 57165813 57166058 -46328916 + Lx9 LINE L1 7209 7462 -182 2 1021 227 31 0 30 chr15 57166245 57166278 -46328696 + (TTA)n Simple_repeat Simple_repeat 1 32 0 2 1021 890 97 21 7 chr15 57166278 57166423 -46328551 - L1_Mus3 LINE L1 -16 6622 6476 2 1021 21 36 0 0 chr15 57166581 57166609 -46328365 + AT_rich Low_complexity Low_complexity 1 28 0 2 1021 281 256 11 44 chr15 57166859 57166949 -46328025 + GA-rich Low_complexity Low_complexity 1 87 0 2 1021 350 296 120 40 chr15 57167092 57167342 -46327632 - RMER12 LTR ERVK -312 1010 741 2 1021 9432 79 32 16 chr15 57167614 57169134 -46325840 - Lx3_Mus LINE L1 0 7009 5469 2 1021 313 188 92 15 chr15 57169212 57169277 -46325697 - ID_B1 SINE B4 -8 216 147 2 1021 287 329 0 14 chr15 57169310 57169384 -46325590 - ID4_ SINE ID -9 74 2 2 1021 379 320 20 7 chr15 57169606 57169754 -46325220 + Lx8 LINE L1 7175 7324 -149 2 1021 315 279 28 46 chr15 57169972 57170081 -46324893 + L1M5 LINE L1 5377 5483 -679 2 1021 618 308 73 70 chr15 57170130 57170264 -46324710 + B4A SINE B4 4 121 -171 2 1021 5914 125 33 19 chr15 57170264 57171209 -46323765 - RMER17B LTR ERVK 0 958 1 2 1021 618 308 73 70 chr15 57171209 57171360 -46323614 + B4A SINE B4 122 290 -2 2 1021 240 149 0 0 chr15 57171367 57171414 -46323560 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 1021 236 203 13 63 chr15 57171547 57171626 -46323348 + B3A SINE B2 124 198 0 2 1021 363 308 7 52 chr15 57172700 57172854 -46322120 + RMER12 LTR ERVK 705 851 -471 2 1021 397 287 17 22 chr15 57172856 57173078 -46321896 + (CATA)n Simple_repeat Simple_repeat 1 220 0 2 1021 348 280 10 0 chr15 57173101 57173201 -46321773 - L1M2 LINE L1 -1196 4947 4847 2 1021 257 316 0 101 chr15 57173823 57173932 -46321042 + MER91A DNA Tip100 74 171 -25 2 1021 677 301 14 5 chr15 57174262 57174469 -46320505 + Lx6 LINE L1 7246 7454 -6 2 1021 1306 50 6 6 chr15 57174469 57174649 -46320325 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 2 1021 463 350 66 30 chr15 57175325 57175658 -46319316 + MLT1A LTR MaLR 1 345 -29 2 1021 2848 331 68 53 chr15 57175963 57177160 -46317814 + MTE-int LTR MaLR 359 1572 -8 2 1021 258 32 0 0 chr15 57177180 57177211 -46317763 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1021 998 46 0 8 chr15 57177228 57177359 -46317615 - B1_Mm SINE Alu -12 135 6 2 1021 752 294 29 66 chr15 57177356 57177600 -46317374 + MTE2b LTR MaLR 70 304 -75 2 1021 1029 253 52 7 chr15 57177600 57177684 -46317290 - Lx7 LINE L1 -862 6834 6751 2 1021 191 36 0 35 chr15 57177684 57177713 -46317261 + (TAA)n Simple_repeat Simple_repeat 2 29 0 2 1021 1029 253 52 7 chr15 57177713 57177915 -46317059 - Lx7 LINE L1 -946 6750 6536 2 1021 603 338 5 5 chr15 57177950 57178170 -46316804 + Lx7 LINE L1 7088 7307 -389 2 1021 227 98 66 0 chr15 57178175 57178236 -46316738 + (TTG)n Simple_repeat Simple_repeat 2 66 0 2 1021 634 304 125 6 chr15 57178589 57179169 -46315805 + L1M2 LINE L1 3669 4315 -1825 2 1021 1366 298 60 24 chr15 57179700 57179850 -46315124 + L1M2 LINE L1 4393 4550 -1593 2 1021 234 0 0 0 chr15 57179850 57179876 -46315098 + (TATG)n Simple_repeat Simple_repeat 3 28 0 2 1021 1366 293 77 25 chr15 57179876 57180864 -46314110 + L1M2 LINE L1 4517 5575 -725 2 1021 228 244 0 0 chr15 57182088 57182178 -46312796 + (TAG)n Simple_repeat Simple_repeat 1 90 0 2 1021 3094 145 47 20 chr15 57182179 57182727 -46312247 - Lx2B LINE L1 -13 6987 6425 2 1021 239 114 0 0 chr15 57182728 57182763 -46312211 + Lx2A LINE L1 6313 6347 -653 2 1021 213 39 0 0 chr15 57182763 57182789 -46312185 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1021 5637 11 0 0 chr15 57182796 57183425 -46311549 - L1Md_T LINE L1 0 6582 5954 2 1021 488 129 20 12 chr15 57183425 57183526 -46311448 + Lx2A LINE L1 6339 6445 -555 2 1021 1500 165 8 4 chr15 57184244 57184505 -46310469 - Lx2A1 LINE L1 -16 6992 6731 2 1021 261 324 46 9 chr15 57184692 57184801 -46310173 + MIRm SINE MIR 48 160 -116 2 1021 256 349 72 114 chr15 57184807 57185114 -46309860 - ORR1E LTR MaLR 0 359 66 2 1021 1665 341 62 11 chr15 57185159 57185882 -46309092 - MTE-int LTR MaLR -43 1537 778 2 1021 897 331 73 52 chr15 57186196 57186623 -46308351 + MER67D LTR ERV1 1 436 -78 2 1021 285 331 152 21 chr15 57187110 57187301 -46307673 + MIR SINE MIR 16 231 -31 2 1021 275 313 28 50 chr15 57187882 57188023 -46306951 + MIR SINE MIR 79 216 -46 2 1021 257 330 28 9 chr15 57188143 57188250 -46306724 + PB1D10 SINE Alu 3 111 -6 2 1021 205 215 253 0 chr15 57189266 57189345 -46305629 + L3 LINE CR1 2101 2199 -2290 2 1021 200 97 32 0 chr15 57189356 57189387 -46305587 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 1021 25 31 0 0 chr15 57189592 57189624 -46305350 + AT_rich Low_complexity Low_complexity 1 32 0 2 1021 6078 110 60 3 chr15 57189762 57190669 -46304305 - RMER17B LTR ERVK 0 958 1 2 1021 312 341 51 71 chr15 57190795 57190991 -46303983 - L1MC1 LINE L1 -12 6321 6130 2 1021 225 130 0 42 chr15 57191133 57191181 -46303793 - L1MC LINE L1 -440 5893 5848 2 1021 496 169 23 15 chr15 57191201 57191333 -46303641 + GA-rich Low_complexity Low_complexity 6 138 0 2 1021 931 297 16 48 chr15 57191354 57191726 -46303248 - Lx8 LINE L1 -255 7218 6859 2 1021 414 0 0 0 chr15 57191726 57191772 -46303202 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1021 387 0 0 0 chr15 57191772 57191814 -46303160 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 1021 196 337 29 38 chr15 57192440 57192545 -46302429 - L2 LINE L2 -612 2807 2704 2 1021 567 275 0 80 chr15 57192918 57193068 -46301906 + ID_B1 SINE B4 86 223 -1 2 1021 6517 28 0 0 chr15 57193583 57194381 -46300593 + L1Md_F2 LINE L1 4789 5586 -297 2 1021 7995 45 8 2 chr15 57194381 57195369 -46299605 + L1Md_F2 LINE L1 5587 6580 -2 2 1021 195 24 0 106 chr15 57195494 57195541 -46299433 + (TTATA)n Simple_repeat Simple_repeat 3 44 0 2 1021 618 252 86 21 chr15 57195678 57195921 -46299053 - L1M1 LINE L1 -505 5795 5537 2 1021 869 74 0 69 chr15 57196567 57196712 -46298262 - L1_Mus1 LINE L1 0 6567 6433 2 1021 21 0 0 0 chr15 57197418 57197439 -46297535 + AT_rich Low_complexity Low_complexity 1 21 0 2 1021 24 85 0 0 chr15 57198789 57198848 -46296126 + AT_rich Low_complexity Low_complexity 1 59 0 2 1021 1893 196 20 5 chr15 57198852 57199246 -46295728 + Lx9 LINE L1 7040 7439 -205 2 1021 27 29 0 0 chr15 57199284 57199318 -46295656 + AT_rich Low_complexity Low_complexity 1 34 0 2 1021 197 337 31 52 chr15 57199438 57199535 -46295439 - L2a LINE L2 -43 3383 3289 2 1021 470 305 83 21 chr15 57200234 57200567 -46294407 - L1MB4 LINE L1 -105 6078 5720 2 1021 293 244 160 0 chr15 57201223 57201323 -46293651 - Lx7 LINE L1 0 7696 7581 2 1021 438 20 0 0 chr15 57201323 57201374 -46293600 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1021 293 244 160 0 chr15 57201374 57201392 -46293582 - Lx7 LINE L1 -116 7580 7561 2 1021 919 149 13 7 chr15 57201481 57201636 -46293338 - Lx7 LINE L1 -339 7357 7202 2 1021 1089 199 65 0 chr15 57201639 57201870 -46293104 - Lx7 LINE L1 -406 7290 7045 3 1021 1702 253 72 34 chr15 57201879 57202353 -46292621 + RLTR18B LTR ERVK 13 504 -8 3 1021 1678 197 108 8 chr15 57202353 57202621 -46292353 - Lx7 LINE L1 -644 7052 6765 3 1021 197 0 0 67 chr15 57202621 57202651 -46292323 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 3 1021 1678 191 70 5 chr15 57202651 57202792 -46292182 - Lx7 LINE L1 -932 6764 6616 3 1021 464 186 0 0 chr15 57202961 57203063 -46291911 - Lx2 LINE L1 0 6997 6896 3 1021 24 0 0 0 chr15 57203206 57203230 -46291744 + AT_rich Low_complexity Low_complexity 1 24 0 3 1021 455 376 177 15 chr15 57203502 57204050 -46290924 - L2a LINE L2 -606 2813 2177 2 1021 537 199 147 24 chr15 57204107 57204204 -46290770 + L1MC2 LINE L1 5721 5814 -530 3 1021 183 42 0 0 chr15 57204204 57204228 -46290746 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1021 537 204 149 27 chr15 57204228 57204330 -46290644 + L1MC2 LINE L1 5815 5943 -2052 3 1021 208 26 0 93 chr15 57204343 57204386 -46290588 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 3 1021 2479 255 62 36 chr15 57204432 57205335 -46289639 + Lx7 LINE L1 368 1297 -6431 3 1021 222 37 0 0 chr15 57205335 57205362 -46289612 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 3 1021 2479 184 52 26 chr15 57205362 57205740 -46289234 + Lx7 LINE L1 1298 1684 -4196 3 1021 5230 201 74 6 chr15 57205737 57206052 -46288922 + Lx5 LINE L1 5798 6126 -924 3 1021 297 0 0 0 chr15 57206052 57206085 -46288889 + (GA)n Simple_repeat Simple_repeat 1 33 0 3 1021 5230 201 74 6 chr15 57206085 57206926 -46288048 + Lx5 LINE L1 6127 7032 -18 3 1021 3195 61 2 0 chr15 57206941 57207336 -46287638 + MTA_Mm LTR MaLR 1 396 0 3 1021 10219 180 95 42 chr15 57207341 57208696 -46286278 + Lx7 LINE L1 2995 4368 -1512 3 1021 198 128 0 0 chr15 57208696 57208735 -46286239 + (CATA)n Simple_repeat Simple_repeat 2 40 0 3 1021 10219 185 146 39 chr15 57208735 57210284 -46284690 + Lx7 LINE L1 4369 6135 -1561 3 1021 637 312 98 35 chr15 57210511 57210797 -46284177 + RMER15 LTR ERVL 272 575 0 3 1021 459 0 0 0 chr15 57210973 57211024 -46283950 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1021 239 236 27 40 chr15 57211169 57211244 -46283730 + L1_Mur3 LINE L1 3483 3556 -2324 3 1021 29 0 0 0 chr15 57211294 57211323 -46283651 + AT_rich Low_complexity Low_complexity 1 29 0 3 1021 258 273 0 0 chr15 57211351 57211417 -46283557 + L1MC LINE L1 3601 3666 -2480 3 1021 288 260 159 9 chr15 57212868 57213101 -46281873 + L1MA4 LINE L1 5662 5929 -371 3 1021 544 344 16 16 chr15 57214942 57215128 -46279846 + B3A SINE B2 13 198 0 3 1021 387 0 0 0 chr15 57215366 57215409 -46279565 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1021 1066 95 0 0 chr15 57216311 57216448 -46278526 + B1_Mus1 SINE Alu 2 138 -10 3 1021 213 39 0 0 chr15 57216448 57216474 -46278500 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 1021 258 32 0 0 chr15 57216786 57216817 -46278157 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1021 2173 127 23 3 chr15 57216820 57217169 -46277805 - L1_Mus4 LINE L1 -7 6629 6274 3 1021 497 269 33 7 chr15 57217187 57217337 -46277637 + Lx8 LINE L1 7185 7338 -135 3 1021 378 0 0 0 chr15 57218327 57218369 -46276605 + (TC)n Simple_repeat Simple_repeat 1 42 0 3 1021 189 0 0 0 chr15 57218371 57218392 -46276582 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1021 736 234 0 0 chr15 57219470 57219598 -46275376 + B1_Mur1 SINE Alu 2 129 -20 3 1021 304 306 90 85 chr15 57219598 57219649 -46275325 + B4A SINE B4 105 266 -26 3 1021 218 339 47 94 chr15 57219707 57219834 -46275140 + L2b LINE L2 3235 3355 -20 3 1021 282 317 30 38 chr15 57219889 57220070 -46274904 + ORR1C1 LTR MaLR 1 184 -175 3 1021 1224 282 46 35 chr15 57220355 57220726 -46274248 + MTEb LTR MaLR 2 376 -3 3 1021 2415 72 3 0 chr15 57220932 57221250 -46273724 - ORR1A2 LTR MaLR -8 319 1 3 1021 270 293 0 15 chr15 57221664 57221748 -46273226 + ID2 SINE ID 8 90 -62 3 1021 426 20 0 0 chr15 57222216 57222267 -46272707 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 3 1021 743 123 8 0 chr15 57223439 57223561 -46271413 + (TC)n Simple_repeat Simple_repeat 1 123 0 3 1021 351 0 0 0 chr15 57223813 57223852 -46271122 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1021 511 239 26 0 chr15 57223858 57223975 -46270999 - Lx7 LINE L1 -388 7308 7189 3 1021 204 314 11 11 chr15 57224162 57224249 -46270725 + A-rich Low_complexity Low_complexity 4 90 0 3 1021 31 0 0 0 chr15 57225305 57225336 -46269638 + AT_rich Low_complexity Low_complexity 1 31 0 3 1021 1239 274 26 10 chr15 57225558 57225867 -46269107 + ORR1D2 LTR MaLR 1 314 -56 3 1021 194 0 39 0 chr15 57227179 57227205 -46267769 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1021 6085 140 44 15 chr15 57227205 57228141 -46266833 - Lx4A LINE L1 -5 7053 6091 3 1021 362 333 7 39 chr15 57228498 57228651 -46266323 - RSINE1 SINE B4 -15 150 3 3 1021 906 248 94 26 chr15 57228712 57229132 -46265842 + L1MA6 LINE L1 5860 6291 0 3 1021 22 0 0 0 chr15 57229485 57229507 -46265467 + AT_rich Low_complexity Low_complexity 1 22 0 3 1021 27 29 0 0 chr15 57231919 57231953 -46263021 + AT_rich Low_complexity Low_complexity 1 34 0 3 1021 1165 182 50 12 chr15 57232292 57232522 -46262452 - ORR1B1 LTR MaLR 0 394 154 3 1021 4351 240 26 23 chr15 57232526 57233538 -46261436 + Lx5 LINE L1 6027 7041 -9 3 1021 673 281 34 78 chr15 57233582 57233875 -46261099 + Kanga1 DNA Tc2 440 719 -1026 3 1021 304 301 77 29 chr15 57233981 57234246 -46260728 + Kanga1 DNA Tc2 1454 1740 -5 3 1021 2784 232 77 16 chr15 57234387 57235143 -46259831 - L1_Mur3 LINE L1 -822 5058 4257 3 1021 2565 315 62 27 chr15 57235137 57235958 -46259016 + Lx8 LINE L1 6317 7165 -308 3 1021 606 39 0 0 chr15 57235958 57236035 -46258939 + (GGGA)n Simple_repeat Simple_repeat 4 80 0 3 1021 2565 315 62 27 chr15 57236035 57236303 -46258671 + Lx8 LINE L1 7166 7443 -30 3 1021 428 336 11 8 chr15 57236492 57236662 -46258312 - Charlie1b DNA MER1_type -345 178 6 3 1021 1733 178 36 82 chr15 57236793 57237185 -46257789 - ORR1D1 LTR MaLR 0 374 1 3 1021 189 220 0 0 chr15 57237281 57237390 -46257584 + (TAGA)n Simple_repeat Simple_repeat 2 110 0 3 1021 589 294 47 1 chr15 57237394 57237555 -46257419 - B3A SINE B2 -44 172 2 3 1021 4858 157 8 22 chr15 57237951 57238735 -46256239 + Lx2B LINE L1 6225 6997 -3 3 1021 480 322 32 79 chr15 57238940 57239156 -46255818 + MER63A DNA AcHobo 3 208 -2 3 1021 1806 209 13 29 chr15 57240275 57240655 -46254319 + Lx5 LINE L1 6677 7050 0 3 1021 652 152 170 22 chr15 57240671 57240732 -46254242 + Lx9 LINE L1 7429 7494 -150 3 1021 540 0 0 0 chr15 57240732 57240792 -46254182 + (TAGA)n Simple_repeat Simple_repeat 4 63 0 3 1021 652 152 170 22 chr15 57240792 57240912 -46254062 + Lx9 LINE L1 7495 7636 -8 3 1021 510 138 0 0 chr15 57241826 57241935 -46253039 + (TCTG)n Simple_repeat Simple_repeat 2 110 0 3 1021 224 335 101 12 chr15 57242090 57242259 -46252715 + MIRb SINE MIR 46 229 -39 3 1021 362 333 79 6 chr15 57242919 57243097 -46251877 - L2a LINE L2 -4 3422 3232 3 1021 1113 93 6 6 chr15 57243560 57243722 -46251252 - IAPLTR3 LTR ERVK 0 326 165 3 1021 1730 29 14 28 chr15 57243731 57243863 -46251111 - L1Md_F2 LINE L1 -776 5806 5677 3 1021 3480 21 39 0 chr15 57243863 57244244 -46250730 - MTA_Mm LTR MaLR 0 396 1 3 1021 1730 29 14 28 chr15 57244244 57244325 -46250649 - L1Md_F2 LINE L1 -906 5676 5596 3 1021 6168 59 0 0 chr15 57244324 57245074 -46249900 + L1Md_F2 LINE L1 5811 6560 -22 3 1021 25158 15 2 11 chr15 57245064 57248768 -46246206 + L1Md_A LINE L1 416 4084 -1799 3 1021 37036 32 1 37 chr15 57248768 57255922 -46239052 - L1Md_T LINE L1 0 6585 1 3 1021 13592 11 1 0 chr15 57255921 57257437 -46237537 + L1Md_A LINE L1 4070 5586 -297 3 1021 9375 15 0 0 chr15 57257437 57258433 -46236541 + L1Md_A LINE L1 5587 6582 0 3 1021 231 64 0 21 chr15 57258434 57258482 -46236492 + L1Md_F2 LINE L1 6536 6582 0 3 1021 1111 90 5 68 chr15 57258488 57258679 -46236295 - IAPLTR3 LTR ERVK -147 179 1 3 1021 290 304 71 24 chr15 57258685 57258851 -46236123 + ORR1D2 LTR MaLR 8 194 -190 3 1021 1615 60 0 5 chr15 57259095 57259295 -46235679 + L1Md_T LINE L1 6384 6582 0 3 1021 1141 301 28 45 chr15 57260179 57260579 -46234395 + RMER1A Other Other 44 436 -594 3 1021 2375 189 112 129 chr15 57260565 57261286 -46233688 + RMER1B Other Other 354 1062 -4 3 1021 22 0 0 0 chr15 57261471 57261493 -46233481 + AT_rich Low_complexity Low_complexity 1 22 0 3 1021 8661 97 6 30 chr15 57262642 57264334 -46230640 + L1Md_F3 LINE L1 4020 5579 -298 3 1021 7951 49 20 61 chr15 57264335 57265373 -46229601 + L1Md_F3 LINE L1 5587 6582 -2 3 1021 995 229 36 41 chr15 57265782 57266001 -46228973 + ID_B1 SINE B4 3 220 -4 3 1021 186 43 0 0 chr15 57266990 57267013 -46227961 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 1021 1222 81 0 0 chr15 57268055 57268203 -46226771 + B1_Mus1 SINE Alu 1 148 0 3 1021 246 62 0 0 chr15 57268206 57268238 -46226736 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 3 1021 789 126 76 14 chr15 57268630 57268775 -46226199 - Lx4A LINE L1 -3 7055 6902 3 1021 24 0 0 0 chr15 57268792 57268816 -46226158 + AT_rich Low_complexity Low_complexity 1 24 0 3 1021 274 312 59 59 chr15 57269137 57269256 -46225718 + MER77 LTR ERVL 88 206 -401 3 1021 982 326 65 68 chr15 57269233 57269547 -46225427 + MER21B LTR ERV1 97 415 -448 3 1021 435 38 0 0 chr15 57269547 57269600 -46225374 + (CCA)n Simple_repeat Simple_repeat 1 53 0 3 1021 982 326 65 68 chr15 57269600 57269854 -46225120 + MER21B LTR ERV1 416 663 -200 3 1021 273 354 21 10 chr15 57269858 57269955 -46225019 + Lx8 LINE L1 7225 7322 -151 3 1021 720 64 0 0 chr15 57269968 57270062 -46224912 + (GA)n Simple_repeat Simple_repeat 2 95 0 3 1021 1959 282 46 28 chr15 57271226 57271872 -46223102 + RMER1C Other Other 683 1340 -2 3 1021 2428 61 40 0 chr15 57272337 57272668 -46222306 - L1_Mus1 LINE L1 0 6567 6250 3 1021 4941 59 2 13 chr15 57272668 57273289 -46221685 + L1_Mus1 LINE L1 5621 6234 -333 3 1021 2787 68 40 6 chr15 57275535 57275888 -46219086 - L1Md_F2 LINE L1 -14 6568 6204 3 1021 923 226 0 21 chr15 57277116 57277310 -46217664 + B2_Mm2 SINE B2 1 190 -5 3 1021 199 239 27 53 chr15 57277492 57277567 -46217407 + MIRc SINE MIR 7 79 -189 3 1022 256 329 119 25 chr15 57279121 57279280 -46215694 + MIRc SINE MIR 44 217 -51 3 1022 483 161 10 51 chr15 57279574 57279672 -46215302 - Lx9 LINE L1 -235 7409 7316 3 1022 2295 125 73 8 chr15 57279673 57280029 -46214945 - Lx4A LINE L1 -1 7057 6679 3 1022 4670 44 12 0 chr15 57281373 57281936 -46213038 - L1_Mus1 LINE L1 0 6567 5998 3 1022 219 36 0 0 chr15 57281941 57281969 -46213005 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 3 1022 1043 39 0 0 chr15 57281970 57282099 -46212875 - B1_Mus1 SINE Alu -7 141 13 4 1022 272 283 164 5 chr15 57282810 57283030 -46211944 - L1MC2 LINE L1 -5 6339 6085 4 1022 31 0 0 0 chr15 57283151 57283182 -46211792 + AT_rich Low_complexity Low_complexity 1 31 0 4 1022 2478 189 99 4 chr15 57283278 57283815 -46211159 - Lx5 LINE L1 -3 7047 6460 4 1022 218 56 0 27 chr15 57283821 57283858 -46211116 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 1022 1021 304 42 35 chr15 57283909 57284089 -46210885 + B4A SINE B4 2 189 -103 4 1022 4337 142 31 27 chr15 57284089 57284540 -46210434 - RMER17D2 LTR ERVK 0 809 349 4 1022 943 106 7 7 chr15 57284540 57284692 -46210282 + (GGAGA)n Simple_repeat Simple_repeat 1 152 0 4 1022 4337 142 31 27 chr15 57284692 57285044 -46209930 - RMER17D2 LTR ERVK -461 348 4 4 1022 1021 304 42 35 chr15 57285044 57285146 -46209828 + B4A SINE B4 190 286 -6 4 1022 212 163 0 0 chr15 57285841 57285884 -46209090 + T-rich Low_complexity Low_complexity 2 44 0 4 1022 244 308 32 32 chr15 57285932 57286026 -46208948 + MER5A DNA MER1_type 51 144 -45 4 1022 312 287 126 0 chr15 57286099 57286186 -46208788 + PB1D10 SINE Alu 19 116 -1 4 1022 387 0 0 0 chr15 57286812 57286855 -46208119 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1022 317 292 35 7 chr15 57287077 57287222 -46207752 + L1ME1 LINE L1 6012 6160 -19 4 1022 1116 188 19 158 chr15 57287719 57288035 -46206939 + RMER20B LTR ERVK 347 618 -9 4 1022 329 340 71 28 chr15 57288162 57288416 -46206558 - L1M5 LINE L1 -409 5831 5567 4 1022 180 176 0 0 chr15 57289314 57289348 -46205626 + MIRc SINE MIR 182 215 -53 4 1022 745 299 193 98 chr15 57289647 57290237 -46204737 + MLT1E LTR MaLR 1 646 -7 4 1022 185 232 40 80 chr15 57290532 57290607 -46204367 - L3 LINE CR1 -3424 1065 994 4 1022 816 53 0 66 chr15 57290668 57290790 -46204184 - B1_Mus1 SINE Alu 0 148 35 4 1022 295 325 79 79 chr15 57290850 57291014 -46203960 + MLT1B LTR MaLR 20 183 -207 4 1022 1573 272 101 98 chr15 57291024 57291385 -46203589 + RMER13A LTR ERVK 3 388 -472 4 1022 329 38 0 37 chr15 57291385 57291439 -46203535 + L1_Mus1 LINE L1 6516 6567 0 4 1022 1573 272 101 98 chr15 57291439 57291921 -46203053 + RMER13A LTR ERVK 389 848 -12 4 1022 544 243 80 34 chr15 57291940 57292115 -46202859 + MLT1B LTR MaLR 204 386 -4 4 1022 986 221 20 15 chr15 57292200 57292398 -46202576 + B3 SINE B2 12 210 -6 4 1022 23 0 0 0 chr15 57292408 57292431 -46202543 + AT_rich Low_complexity Low_complexity 1 23 0 4 1022 629 302 52 101 chr15 57293128 57293434 -46201540 + B4 SINE B4 2 292 0 4 1022 421 318 44 74 chr15 57293476 57293843 -46201131 + ORR1E LTR MaLR 4 359 0 4 1022 680 257 47 26 chr15 57293915 57294107 -46200867 - B3A SINE B2 -1 197 2 4 1022 306 0 0 0 chr15 57294213 57294247 -46200727 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1022 263 300 51 45 chr15 57294782 57294904 -46200070 + MLT1H LTR MaLR 48 207 -342 4 1022 343 377 63 27 chr15 57297149 57297370 -46197604 - MIR SINE MIR 0 262 34 4 1022 1712 179 25 108 chr15 57299329 57299774 -46195200 - RMER1B Other Other -3 1063 656 4 1022 323 185 62 0 chr15 57299831 57299896 -46195078 + RMER1B Other Other 569 637 -429 4 1022 182 314 14 14 chr15 57300867 57300938 -46194036 - L3b LINE CR1 -228 254 184 4 1022 234 136 0 0 chr15 57301097 57301141 -46193833 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 1022 1105 278 138 5 chr15 57301415 57301806 -46193168 + Lx8 LINE L1 6891 7333 -140 4 1022 282 304 0 11 chr15 57302173 57302266 -46192708 - MLT1A1 LTR MaLR 0 408 317 4 1022 229 326 31 42 chr15 57304331 57304427 -46190547 + Charlie4z DNA MER1_type 64 158 -9 4 1022 2136 81 218 23 chr15 57304479 57304668 -46190306 - BGLII_Mus LTR ERVK 0 422 178 4 1022 573 15 0 0 chr15 57304668 57304734 -46190240 + (TC)n Simple_repeat Simple_repeat 2 67 0 4 1022 2136 81 218 23 chr15 57304734 57304897 -46190077 - BGLII_Mus LTR ERVK -245 177 3 4 1022 790 228 13 0 chr15 57304897 57305046 -46189928 + B3A SINE B2 10 160 -38 4 1022 25 31 0 0 chr15 57305068 57305100 -46189874 + AT_rich Low_complexity Low_complexity 1 32 0 4 1022 244 309 199 26 chr15 57305466 57305622 -46189352 - LTR16C LTR ERVL -1 488 306 4 1022 216 0 0 0 chr15 57305682 57305706 -46189268 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 1022 3541 118 27 70 chr15 57306119 57306514 -46188460 - Lx2B LINE L1 -492 6508 6150 4 1022 194 0 39 0 chr15 57306522 57306548 -46188426 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1022 1164 68 0 0 chr15 57306548 57306685 -46188289 - B1_Mus2 SINE Alu -8 139 3 4 1022 3541 118 27 70 chr15 57306685 57306946 -46188028 - Lx2B LINE L1 -851 6149 5880 4 1022 2924 136 46 0 chr15 57306946 57307401 -46187573 + Lx2B LINE L1 6522 6997 -3 4 1022 263 71 24 0 chr15 57308770 57308812 -46186162 + (CATA)n Simple_repeat Simple_repeat 2 44 0 4 1022 1557 248 60 17 chr15 57309952 57310549 -46184425 - Lx6 LINE L1 -85 7375 6455 4 1022 1030 291 27 5 chr15 57310574 57310997 -46183977 + Lx5 LINE L1 6045 6696 -764 4 1022 518 310 52 6 chr15 57311114 57311286 -46183688 - MLT1B LTR MaLR -19 371 192 4 1022 374 217 146 65 chr15 57311471 57311594 -46183380 - MTEa LTR MaLR -240 139 7 4 1022 1641 319 64 47 chr15 57311676 57313003 -46181971 - MTEa-int LTR MaLR -154 1426 1 4 1022 692 299 99 99 chr15 57313013 57313355 -46181619 - MTEa LTR MaLR -13 366 25 4 1022 434 329 34 14 chr15 57313333 57313481 -46181493 - MLT1B LTR MaLR -223 151 1 4 1022 252 0 0 0 chr15 57313586 57313614 -46181360 + (CCA)n Simple_repeat Simple_repeat 3 30 0 4 1022 257 272 11 21 chr15 57314677 57314771 -46180203 + L1M5 LINE L1 3578 3670 -2476 4 1022 396 0 0 0 chr15 57314778 57314822 -46180152 + (TTTAG)n Simple_repeat Simple_repeat 3 46 0 4 1022 264 272 0 24 chr15 57315506 57315589 -46179385 + (CATATA)n Simple_repeat Simple_repeat 4 84 0 4 1022 248 374 11 0 chr15 57315551 57315725 -46179249 + (CA)n Simple_repeat Simple_repeat 1 176 0 4 1022 1217 266 19 58 chr15 57315893 57316272 -46178702 - ORR1E LTR MaLR 0 421 1 4 1022 227 295 201 19 chr15 57316749 57316908 -46178066 - MIR3 SINE MIR -6 202 15 4 1022 1374 164 0 13 chr15 57317209 57317438 -46177536 + URR1A DNA MER1_type 1 226 0 4 1022 461 47 16 0 chr15 57318400 57318464 -46176510 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 4 1022 42 48 0 0 chr15 57318465 57318528 -46176446 + AT_rich Low_complexity Low_complexity 1 63 0 4 1022 744 248 104 5 chr15 57318871 57319082 -46175892 + Lx5 LINE L1 6816 7047 -3 4 1022 264 229 29 0 chr15 57319296 57319366 -46175608 + tRNA-Gln-CAA_ tRNA tRNA 1 72 -3 4 1022 21 57 0 0 chr15 57319708 57319743 -46175231 + AT_rich Low_complexity Low_complexity 1 35 0 4 1022 255 172 121 0 chr15 57320439 57320497 -46174477 - tRNA-Leu-TTA(m) tRNA tRNA -11 67 3 4 1022 21 36 0 0 chr15 57320961 57320989 -46173985 + AT_rich Low_complexity Low_complexity 1 28 0 4 1022 2994 43 0 8 chr15 57321066 57321439 -46173535 + L1Md_F3 LINE L1 6214 6583 -1 4 1022 206 217 33 0 chr15 57321639 57321699 -46173275 + T-rich Low_complexity Low_complexity 4 65 0 4 1022 1153 149 38 19 chr15 57321997 57322209 -46172765 - URR1A DNA MER1_type -10 216 1 4 1022 217 233 0 0 chr15 57322677 57322737 -46172237 + (TTAA)n Simple_repeat Simple_repeat 3 62 0 4 1022 1606 199 108 41 chr15 57324363 57324750 -46170224 - MTD LTR MaLR -6 413 1 4 1022 198 147 0 0 chr15 57325811 57325845 -46169129 - MIRc SINE MIR -123 145 112 4 1022 569 259 28 7 chr15 57325845 57325989 -46168985 + RMER15 LTR ERVL 410 556 -19 4 1022 537 16 0 0 chr15 57326026 57326088 -46168886 + (TC)n Simple_repeat Simple_repeat 1 62 0 4 1022 730 272 54 43 chr15 57326093 57326468 -46168506 - L1MA4 LINE L1 -269 5920 5547 4 1022 892 215 89 34 chr15 57326474 57326710 -46168264 + MT2A LTR ERVL 1 249 -284 4 1022 246 303 47 63 chr15 57327956 57328083 -46166891 + MIR SINE MIR 81 205 -57 4 1022 23 0 0 0 chr15 57328219 57328242 -46166732 + AT_rich Low_complexity Low_complexity 1 23 0 4 1022 1243 64 75 0 chr15 57328310 57328483 -46166491 - B2_Mm2 SINE B2 -7 188 3 4 1022 183 379 41 104 chr15 57330191 57330459 -46164515 + L2b LINE L2 3053 3303 -72 4 1022 2909 149 156 12 chr15 57331234 57331361 -46163613 + L1_Mur3 LINE L1 4502 4622 -1258 4 1022 360 0 0 0 chr15 57331361 57331401 -46163573 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1022 2909 149 156 12 chr15 57331401 57331926 -46163048 + L1_Mur3 LINE L1 4623 5247 -633 4 1022 266 262 12 12 chr15 57331926 57332011 -46162963 + Lx7 LINE L1 7600 7684 -12 4 1022 5391 38 15 5 chr15 57332011 57332670 -46162304 - L1Md_F2 LINE L1 0 6582 5917 4 1022 3528 39 0 2 chr15 57332670 57333082 -46161892 - L1_Mm LINE L1 -70 5813 5403 4 1022 1508 190 24 3 chr15 57333350 57333645 -46161329 + Lx5 LINE L1 6747 7047 -3 4 1022 394 312 63 74 chr15 57333867 57334151 -46160823 + B4A SINE B4 1 281 -11 4 1022 233 305 0 17 chr15 57334120 57334180 -46160794 + RSINE1 SINE B4 107 165 0 4 1022 27 0 0 0 chr15 57334210 57334237 -46160737 + AT_rich Low_complexity Low_complexity 1 27 0 4 1022 546 306 75 15 chr15 57334242 57334441 -46160533 + ID_B1 SINE B4 1 211 -13 4 1022 324 261 128 161 chr15 57335045 57335287 -46159687 + MT2A LTR ERVL 1 234 -299 4 1022 734 308 57 17 chr15 57335325 57335622 -46159352 + MT2A LTR ERVL 225 533 0 4 1022 199 350 0 0 chr15 57335630 57335690 -46159284 - MIR SINE MIR -68 140 81 4 1022 577 174 0 0 chr15 57337420 57337527 -46157447 - Lx LINE L1 -268 6314 6202 4 1022 1968 137 55 8 chr15 57337527 57337889 -46157085 + Lx LINE L1 6275 6653 -1 4 1022 851 188 6 0 chr15 57337889 57338065 -46156909 + GA-rich Low_complexity Low_complexity 1 177 0 4 1022 338 171 14 0 chr15 57338084 57338154 -46156820 + GA-rich Low_complexity Low_complexity 2 72 0 4 1022 887 167 0 17 chr15 57338170 57338347 -46156627 + GA-rich Low_complexity Low_complexity 1 174 0 4 1022 22 0 0 0 chr15 57338688 57338710 -46156264 + GC_rich Low_complexity Low_complexity 1 22 0 4 1022 187 388 0 0 chr15 57338839 57338937 -46156037 - MIR SINE MIR -95 167 70 4 1022 354 254 0 0 chr15 57338960 57339031 -46155943 + PB1D10 SINE Alu 3 73 -44 4 1022 730 306 44 18 chr15 57339036 57339309 -46155665 + B4A SINE B4 3 282 -10 4 1022 1011 269 45 38 chr15 57339805 57340118 -46154856 + MTEa LTR MaLR 65 379 0 5 1022 540 0 0 0 chr15 57340347 57340407 -46154567 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 1022 210 288 17 0 chr15 57341957 57342016 -46152958 + MIRm SINE MIR 89 148 -128 5 1022 287 241 17 0 chr15 57342169 57342227 -46152747 + ID4 SINE ID 25 83 0 5 1022 438 215 45 27 chr15 57342339 57342449 -46152525 - ID_B1 SINE B4 -11 213 102 5 1022 326 348 30 51 chr15 57342670 57342867 -46152107 - MER20 DNA MER1_type -1 218 26 5 1022 953 55 0 0 chr15 57342959 57343086 -46151888 + B1_Mus1 SINE Alu 1 127 -21 5 1022 949 211 32 5 chr15 57344682 57344901 -46150073 + Lx2B LINE L1 6757 6981 -19 5 1022 1995 266 22 71 chr15 57344997 57346009 -46148965 - Lx6 LINE L1 -26 7434 6113 5 1022 459 0 0 0 chr15 57346805 57346856 -46148118 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 5 1022 1157 50 11 33 chr15 57346879 57347063 -46147911 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 5 1022 288 305 84 64 chr15 57347829 57348032 -46146942 - MIR SINE MIR -40 228 20 5 1022 342 125 116 74 chr15 57348961 57349056 -46145918 + Lx9 LINE L1 7545 7643 -1 5 1022 21 0 0 0 chr15 57350724 57350745 -46144229 + AT_rich Low_complexity Low_complexity 1 21 0 5 1022 374 281 15 10 chr15 57350898 57351104 -46143870 + (CA)n Simple_repeat Simple_repeat 1 207 0 5 1022 709 294 39 19 chr15 57351141 57351401 -46143573 + L1MB5 LINE L1 5838 6102 -72 5 1022 372 71 0 0 chr15 57351591 57351647 -46143327 + (TTTC)n Simple_repeat Simple_repeat 2 57 0 5 1022 457 287 39 0 chr15 57351679 57351808 -46143166 + RSINE1 SINE B4 7 140 -25 5 1022 378 0 0 0 chr15 57351846 57351888 -46143086 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1022 2888 68 5 0 chr15 57353241 57353631 -46141343 - L1_Mus1 LINE L1 0 6567 6190 5 1022 420 328 109 16 chr15 57353795 57353978 -46140996 - MLT1H1 LTR MaLR -33 522 323 5 1022 815 311 17 51 chr15 57354013 57354308 -46140666 + B4 SINE B4 4 288 -4 5 1022 246 333 64 9 chr15 57354469 57354578 -46140396 - MLT1H1 LTR MaLR -304 245 131 5 1022 503 272 255 0 chr15 57356319 57356531 -46138443 + B4 SINE B4 5 270 -22 5 1022 1617 248 145 55 chr15 57357120 57357755 -46137219 - Lx9 LINE L1 -16 7628 6937 5 1022 14432 52 10 0 chr15 57357758 57360235 -46134739 - L1Md_F2 LINE L1 0 6582 4082 5 1022 514 339 38 17 chr15 57360551 57360788 -46134186 + L1MB5 LINE L1 5927 6168 -6 5 1022 346 289 69 19 chr15 57360791 57360950 -46134024 + L1MEd LINE L1 977 1143 -4976 5 1022 539 310 24 55 chr15 57361393 57361683 -46133291 + B4A SINE B4 2 282 -10 5 1022 259 257 98 10 chr15 57361786 57361888 -46133086 + LTR48B LTR ERV1 118 228 -416 5 1022 452 263 51 7 chr15 57362181 57362319 -46132655 + MER58A DNA MER1_type 77 220 -4 5 1022 373 299 41 78 chr15 57362797 57363015 -46131959 + ORR1E LTR MaLR 1 210 -149 5 1022 380 288 75 8 chr15 57363229 57363362 -46131612 + MLT1A LTR MaLR 205 346 -28 5 1022 815 295 54 33 chr15 57363439 57363775 -46131199 - MER2 DNA MER2_type -1 344 2 5 1022 184 329 0 109 chr15 57364896 57364988 -46129986 - L2c LINE L2 -3 3384 3303 5 1022 712 123 27 12 chr15 57365585 57365925 -46129049 + (CA)n Simple_repeat Simple_repeat 1 345 0 5 1022 235 363 21 21 chr15 57367145 57367238 -46127736 - Cheshire DNA MER1_type -2314 106 14 5 1022 304 318 9 25 chr15 57367635 57367761 -46127213 + MIRc SINE MIR 35 155 -107 5 1022 461 176 35 0 chr15 57368048 57368133 -46126841 + B1_Mur2 SINE Alu 10 97 -52 5 1022 21 0 0 0 chr15 57368246 57368267 -46126707 + AT_rich Low_complexity Low_complexity 1 21 0 5 1022 485 274 63 41 chr15 57368878 57369099 -46125875 + Lx9 LINE L1 7122 7347 -297 5 1022 194 301 54 14 chr15 57369256 57369330 -46125644 - L2c LINE L2 -223 3164 3088 5 1022 289 221 13 13 chr15 57369562 57369640 -46125334 - MLT1I LTR MaLR -19 392 315 5 1022 485 298 154 20 chr15 57370016 57370263 -46124711 + MLT1A0 LTR MaLR 86 365 0 5 1022 364 320 24 1 chr15 57371977 57372117 -46122857 - MLT1A LTR MaLR -2 388 234 5 1022 242 295 12 25 chr15 57372094 57372174 -46122800 - MLT1A LTR MaLR -287 103 25 5 1022 441 66 0 0 chr15 57372260 57372321 -46122653 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1022 281 328 20 68 chr15 57372821 57372968 -46122006 - B4A SINE B4 -151 141 2 5 1022 268 289 22 0 chr15 57373069 57373159 -46121815 - Lx7 LINE L1 -20 7676 7585 5 1022 210 224 0 0 chr15 57373165 57373250 -46121724 + CT-rich Low_complexity Low_complexity 1 85 0 5 1022 307 300 41 31 chr15 57373257 57373453 -46121521 - Lx7 LINE L1 -282 7414 7217 5 1022 247 231 11 133 chr15 57373454 57373544 -46121430 - PB1D10 SINE Alu -35 82 4 5 1022 278 273 24 24 chr15 57373616 57373740 -46121234 + A-rich Low_complexity Low_complexity 2 125 0 5 1022 271 361 47 63 chr15 57374159 57374294 -46120680 + MamRep564 Unknown Unknown 71 200 -157 5 1022 249 33 0 0 chr15 57374294 57374324 -46120650 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 5 1022 271 361 47 63 chr15 57374324 57374442 -46120532 + MamRep564 Unknown Unknown 201 319 -38 5 1022 331 136 86 54 chr15 57374901 57374987 -46119987 + MLT2D LTR ERVL 5 93 -321 5 1022 775 204 261 120 chr15 57374987 57375221 -46119753 + MT2A LTR ERVL 1 195 -338 5 1022 546 16 0 0 chr15 57375221 57375284 -46119690 + (TC)n Simple_repeat Simple_repeat 1 63 0 5 1022 775 204 261 120 chr15 57375284 57375406 -46119568 + MT2A LTR ERVL 196 407 -126 5 1022 413 259 9 26 chr15 57375520 57375635 -46119339 - PB1D7 SINE Alu -7 113 1 5 1022 446 213 237 17 chr15 57375661 57375838 -46119136 - B3 SINE B2 0 216 1 5 1022 275 288 202 17 chr15 57376017 57376190 -46118784 + MLT2D LTR ERVL 210 414 0 5 1022 558 258 65 62 chr15 57378254 57378622 -46116352 + Charlie2b DNA MER1_type 2137 2505 -277 5 1022 200 136 11 138 chr15 57379245 57379339 -46115635 + A-rich Low_complexity Low_complexity 1 82 0 5 1022 20072 44 3 0 chr15 57379362 57381793 -46113181 + L1Md_F3 LINE L1 3149 5586 -297 5 1022 8365 33 4 4 chr15 57381793 57382776 -46112198 + L1Md_F3 LINE L1 5587 6569 -15 5 1022 1191 62 0 0 chr15 57382919 57383064 -46111910 + B1_Mus1 SINE Alu 4 148 0 5 1022 880 136 0 28 chr15 57383087 57383268 -46111706 + GA-rich Low_complexity Low_complexity 1 176 0 5 1022 1219 65 6 6 chr15 57383274 57383445 -46111529 + (GGAGAA)n Simple_repeat Simple_repeat 6 176 0 5 1022 534 214 167 0 chr15 57383447 57383573 -46111401 + B3 SINE B2 16 162 -54 5 1022 1393 213 68 35 chr15 57383638 57384037 -46110937 + Lx7 LINE L1 357 768 -6960 5 1022 1386 202 31 7 chr15 57384036 57384325 -46110649 - Lx7 LINE L1 -6840 888 593 5 1022 277 161 0 0 chr15 57384320 57384376 -46110598 + Lx7 LINE L1 897 952 -6776 5 1022 2199 71 37 52 chr15 57384422 57384497 -46110477 - Lx2 LINE L1 -1010 5987 5912 5 1022 186 43 0 0 chr15 57384497 57384520 -46110454 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1022 2199 71 37 52 chr15 57384520 57384645 -46110329 - Lx2 LINE L1 -1086 5911 5784 5 1022 5469 62 1 11 chr15 57384645 57385345 -46109629 + L1Md_F2 LINE L1 5883 6575 -7 5 1022 2199 71 37 52 chr15 57385345 57385471 -46109503 - Lx2 LINE L1 -1214 5783 5666 5 1022 1211 126 241 12 chr15 57385459 57385700 -46109274 + Lx2 LINE L1 6697 6992 -5 5 1022 6271 162 59 21 chr15 57385713 57386415 -46108559 + Lx7 LINE L1 934 1687 -4193 5 1022 479 16 32 0 chr15 57386415 57386478 -46108496 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 5 1022 6271 162 66 45 chr15 57386478 57387402 -46107572 + Lx7 LINE L1 1688 2609 -3271 5 1022 198 71 0 0 chr15 57387402 57387430 -46107544 + (TTG)n Simple_repeat Simple_repeat 1 28 0 5 1022 6271 162 66 45 chr15 57387430 57387519 -46107455 + Lx7 LINE L1 2610 2700 -3180 5 1022 6193 169 65 22 chr15 57387513 57389335 -46105639 + Lx7 LINE L1 3987 6019 -1677 5 1022 441 0 0 0 chr15 57389335 57389384 -46105590 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1022 4039 209 29 23 chr15 57389384 57389825 -46105149 + Lx7 LINE L1 6020 6458 -1238 5 1022 2406 124 2 23 chr15 57389877 57390274 -46104700 - MTB_Mm LTR MaLR 0 407 19 5 1022 458 78 0 38 chr15 57390380 57390460 -46104514 - L1Md_F2 LINE L1 -1 6581 6505 5 1022 344 325 9 0 chr15 57390717 57390831 -46104143 + MLT2B1 LTR ERVL 1 115 -405 5 1022 256 250 16 0 chr15 57390912 57390976 -46103998 - ORR1C1 LTR MaLR -313 65 1 5 1022 246 257 57 0 chr15 57391031 57391101 -46103873 - MLT2B5 LTR ERVL -388 213 140 5 1022 402 190 0 37 chr15 57391136 57391218 -46103756 + MTEa LTR MaLR 1 79 -300 5 1022 1717 224 60 48 chr15 57391235 57391729 -46103245 + RMER19C LTR ERVK 35 611 0 5 1022 772 253 34 75 chr15 57391729 57391968 -46103006 + MTEa LTR MaLR 74 302 -77 5 1022 195 42 0 0 chr15 57391969 57391993 -46102981 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1022 343 272 225 0 chr15 57392012 57392185 -46102789 + MLT2B1 LTR ERVL 351 562 0 5 1022 321 330 62 36 chr15 57394136 57394328 -46100646 - MLT1A LTR MaLR -159 215 19 5 1022 225 0 0 0 chr15 57394609 57394634 -46100340 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5 1022 4502 34 8 6 chr15 57395557 57396091 -46098883 - L1Md_F2 LINE L1 0 6582 6048 5 1022 231 157 0 0 chr15 57396485 57396536 -46098438 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1022 465 244 0 0 chr15 57396559 57396735 -46098239 + (CA)n Simple_repeat Simple_repeat 1 176 0 5 1022 422 252 0 8 chr15 57396773 57397034 -46097940 + (CA)n Simple_repeat Simple_repeat 1 258 0 5 1022 303 111 0 0 chr15 57397069 57397114 -46097860 + HAL1-3A_ME LINE L1 1975 2019 -839 5 1022 670 224 0 0 chr15 57397162 57397278 -46097696 + PB1D9 SINE Alu 2 117 -3 5 1022 757 179 6 6 chr15 57397823 57397980 -46096994 + URR1A DNA MER1_type 70 226 0 5 1022 240 35 0 0 chr15 57398249 57398278 -46096696 + (TTGG)n Simple_repeat Simple_repeat 2 30 0 5 1022 224 273 13 13 chr15 57400066 57400144 -46094830 - MIR SINE MIR 0 262 185 5 1022 224 179 38 2 chr15 57401483 57401543 -46093431 + MIR SINE MIR 82 142 -134 5 1022 1298 221 115 15 chr15 57402689 57403029 -46091945 + ORR1D1 LTR MaLR 1 374 0 5 1022 1290 231 32 97 chr15 57403059 57403400 -46091574 + MTEa LTR MaLR 3 319 -60 5 1022 2818 101 55 26 chr15 57403400 57403859 -46091115 - Lx LINE L1 -1 6653 6182 5 1022 1290 231 32 97 chr15 57403859 57403920 -46091054 + MTEa LTR MaLR 320 379 0 5 1022 2765 274 86 35 chr15 57404321 57405315 -46089659 + Lx8 LINE L1 6430 7473 0 5 1022 402 162 0 0 chr15 57405323 57405397 -46089577 + GA-rich Low_complexity Low_complexity 1 74 0 5 1022 669 13 0 0 chr15 57406067 57406145 -46088829 + (TC)n Simple_repeat Simple_repeat 2 79 0 5 1022 244 218 135 22 chr15 57406322 57406411 -46088563 - L2a LINE L2 -6 3420 3322 5 1022 284 259 112 30 chr15 57407668 57407821 -46087153 + MLT1I LTR MaLR 287 448 0 5 1022 226 306 177 0 chr15 57409198 57409322 -46085652 + LTR16B LTR ERVL 293 438 -25 5 1023 393 63 5 2 chr15 57409548 57409610 -46085364 - ORR1A3-int LTR MaLR -1729 63 1 5 1023 364 103 0 33 chr15 57409610 57409661 -46085313 - ORR1A3 LTR MaLR 0 326 277 5 1023 1539 68 0 5 chr15 57409661 57409853 -46085121 - B2_Mm2 SINE B2 -4 191 1 5 1023 2444 132 12 65 chr15 57411050 57411464 -46083510 + ORR1B1 LTR MaLR 1 392 -2 6 1023 23 0 0 0 chr15 57411957 57411980 -46082994 + AT_rich Low_complexity Low_complexity 1 23 0 6 1023 1326 170 134 0 chr15 57412010 57412286 -46082688 - ORR1A3 LTR MaLR -13 313 1 5 1023 527 294 29 0 chr15 57414000 57414170 -46080804 + MER105 DNA DNA 7 181 -23 6 1023 289 316 25 0 chr15 57414389 57414503 -46080471 + MLT1E3 LTR MaLR 325 464 -216 6 1023 472 71 0 28 chr15 57414748 57414820 -46080154 - L1_Mm LINE L1 -2720 3163 3094 6 1023 2125 108 6 21 chr15 57415855 57415967 -46079007 + ORR1A2 LTR MaLR 2 113 -214 6 1023 1400 196 51 42 chr15 57415967 57416323 -46078651 + RLTR10D LTR ERVK 1 359 0 6 1023 2125 108 6 21 chr15 57416323 57416541 -46078433 + ORR1A2 LTR MaLR 114 327 0 6 1023 247 375 89 76 chr15 57417138 57417453 -46077521 - LTR16C LTR ERVL -72 417 99 6 1023 338 269 15 0 chr15 57418178 57418261 -46076713 + ID4_ SINE ID 2 86 -66 6 1023 259 359 91 8 chr15 57418951 57419083 -46075891 + MIRb SINE MIR 39 181 -87 6 1023 463 282 167 9 chr15 57419946 57420161 -46074813 + RMER15 LTR ERVL 327 575 0 6 1023 369 0 0 0 chr15 57421388 57421429 -46073545 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1023 26 30 0 0 chr15 57421515 57421548 -46073426 + GC_rich Low_complexity Low_complexity 1 33 0 6 1023 438 302 113 13 chr15 57422405 57422643 -46072331 - MLT1C LTR MaLR -3 464 203 6 1023 183 303 107 52 chr15 57423697 57423930 -46071044 + L2 LINE L2 374 619 -2800 6 1023 274 169 31 0 chr15 57424395 57424460 -46070514 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1023 583 265 56 113 chr15 57424502 57424804 -46070170 - B4A SINE B4 -6 286 2 6 1023 1390 287 34 58 chr15 57425844 57425927 -46069047 - MTE-int LTR MaLR -795 785 711 6 1023 1847 166 122 19 chr15 57425927 57426296 -46068678 - MTB_Mm LTR MaLR 0 407 1 6 1023 1390 278 29 58 chr15 57426296 57426869 -46068105 - MTE-int LTR MaLR -870 710 75 6 1023 440 289 18 50 chr15 57426891 57427082 -46067892 - ORR1E LTR MaLR -200 184 6 6 1023 950 113 7 0 chr15 57427754 57427905 -46067069 + (TC)n Simple_repeat Simple_repeat 1 152 0 6 1023 475 321 62 31 chr15 57428130 57428390 -46066584 + HAL1 LINE L1 1 268 -2239 6 1023 5796 73 20 1 chr15 57428738 57429490 -46065484 + L1_Mus1 LINE L1 5802 6567 0 6 1023 26 0 0 0 chr15 57429945 57429971 -46065003 + AT_rich Low_complexity Low_complexity 1 26 0 6 1023 201 74 0 0 chr15 57432536 57432563 -46062411 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 6 1023 234 0 0 0 chr15 57433370 57433396 -46061578 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1023 405 0 0 0 chr15 57433396 57433440 -46061534 + (GA)n Simple_repeat Simple_repeat 1 45 0 6 1023 408 67 0 0 chr15 57434961 57435021 -46059953 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 1023 501 291 73 46 chr15 57435174 57435502 -46059472 + Charlie5 DNA MER1_type 2243 2579 -45 6 1023 388 290 139 63 chr15 57435510 57435662 -46059312 - ORR1E LTR MaLR 0 359 193 6 1023 180 0 0 0 chr15 57435662 57435682 -46059292 + (CAGA)n Simple_repeat Simple_repeat 3 22 0 6 1023 388 290 139 63 chr15 57435682 57435860 -46059114 - ORR1E LTR MaLR -167 192 5 6 1023 580 271 143 40 chr15 57435996 57436276 -46058698 - MTE2b LTR MaLR -9 370 58 6 1023 276 184 108 25 chr15 57436679 57436783 -46058191 + MIR3 SINE MIR 81 190 -86 6 1023 396 0 0 0 chr15 57437276 57437320 -46057654 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1023 239 317 129 8 chr15 57438273 57438397 -46056577 + LTR78 LTR ERV1 386 524 -780 6 1023 1301 52 0 0 chr15 57438774 57438928 -46056046 + L1Md_F2 LINE L1 5433 5586 -297 6 1023 8637 29 0 5 chr15 57438929 57439929 -46055045 + L1Md_F2 LINE L1 5588 6582 0 6 1023 441 244 17 9 chr15 57440364 57440480 -46054494 - L1M5 LINE L1 -387 5737 5621 6 1023 228 137 0 0 chr15 57441073 57441124 -46053850 + (T)n Simple_repeat Simple_repeat 1 51 0 6 1023 1251 48 0 0 chr15 57441125 57441272 -46053702 - B1_Mus2 SINE Alu 0 147 1 6 1023 1011 88 0 0 chr15 57442565 57442713 -46052261 + (TGGA)n Simple_repeat Simple_repeat 1 148 0 6 1023 473 262 0 0 chr15 57444237 57444344 -46050630 + PB1D10 SINE Alu 3 109 -8 6 1023 381 184 9 18 chr15 57444494 57444605 -46050369 + GA-rich Low_complexity Low_complexity 3 112 0 6 1023 392 304 7 43 chr15 57444658 57444799 -46050175 + ID_B1 SINE B4 80 215 -9 6 1023 363 203 14 0 chr15 57444816 57444885 -46050089 + ID4 SINE ID 3 72 -11 6 1023 186 43 0 0 chr15 57444889 57444912 -46050062 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 1023 875 90 23 0 chr15 57444913 57445046 -46049928 + (GGGAGA)n Simple_repeat Simple_repeat 3 138 0 6 1023 1235 269 30 22 chr15 57445406 57445774 -46049200 - MTEa LTR MaLR -8 371 1 6 1023 1774 182 104 19 chr15 57445879 57446253 -46048721 - MTB_Mm LTR MaLR 0 407 2 6 1023 2510 244 111 48 chr15 57447156 57447912 -46047062 + Lx6 LINE L1 6647 7450 -10 6 1023 483 18 0 0 chr15 57448120 57448176 -46046798 + (TC)n Simple_repeat Simple_repeat 1 56 0 6 1023 853 198 49 59 chr15 57449075 57449279 -46045695 + B3 SINE B2 2 203 -13 6 1023 1252 106 39 0 chr15 57449743 57449923 -46045051 + B2_Mm2 SINE B2 2 188 -7 6 1023 1197 267 82 19 chr15 57451237 57451892 -46043082 + L1MD2 LINE L1 5171 5863 -496 6 1023 8613 25 1 8 chr15 57452000 57452996 -46041978 - L1Md_F2 LINE L1 -2 6580 5592 6 1023 5067 63 0 1 chr15 57452996 57453643 -46041331 + L1_Mm LINE L1 3485 4130 -1753 6 1023 258 254 28 0 chr15 57454172 57454243 -46040731 + GA-rich Low_complexity Low_complexity 2 74 0 6 1023 305 260 37 7 chr15 57454583 57454710 -46040264 + LTR37A LTR ERV1 315 461 -7 6 1023 215 355 23 62 chr15 57454729 57454858 -46040116 + MIRb SINE MIR 96 219 -49 6 1023 280 319 74 25 chr15 57455650 57455772 -46039202 + MER5A1 DNA MER1_type 35 162 -4 6 1023 3048 57 72 52 chr15 57455800 57456242 -46038732 + L1Md_F2 LINE L1 6128 6578 -4 6 1023 618 260 75 0 chr15 57456558 57456731 -46038243 + B3 SINE B2 1 186 -30 6 1023 901 60 15 0 chr15 57456757 57456890 -46038084 + (TAGA)n Simple_repeat Simple_repeat 4 138 0 6 1023 229 339 174 24 chr15 57457156 57457748 -46037226 - L2 LINE L2 -1731 1688 1008 6 1023 456 291 14 3 chr15 57458120 57458250 -46036724 - MTEa LTR MaLR -14 405 262 6 1023 277 266 101 0 chr15 57458273 57458352 -46036622 - MTEa LTR MaLR -292 87 1 6 1023 1219 137 92 5 chr15 57458406 57458612 -46036362 - URR1A DNA MER1_type -2 224 1 6 1023 367 360 78 12 chr15 57459684 57459837 -46035137 + MLT1E2 LTR MaLR 367 517 -110 6 1023 963 262 115 35 chr15 57459837 57460185 -46034789 + MTEa LTR MaLR 1 376 -3 6 1023 367 360 78 12 chr15 57460185 57460276 -46034698 + MLT1E2 LTR MaLR 518 626 -1 6 1023 833 185 0 6 chr15 57461265 57461444 -46033530 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 6 1023 1503 28 0 0 chr15 57461444 57461624 -46033350 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 6 1023 378 340 26 7 chr15 57461826 57461977 -46032997 - MER117 DNA MER1_type 0 197 44 6 1023 196 336 59 17 chr15 57462122 57462240 -46032734 + MIR SINE MIR 106 228 -34 6 1023 21 71 0 0 chr15 57462255 57462297 -46032677 + AT_rich Low_complexity Low_complexity 1 42 0 6 1023 314 182 173 48 chr15 57463134 57463238 -46031736 + PB1D10 SINE Alu 1 117 0 6 1023 627 263 26 20 chr15 57463244 57463463 -46031511 + B3A SINE B2 5 210 -6 6 1023 527 213 0 34 chr15 57464939 57465114 -46029860 + GA-rich Low_complexity Low_complexity 1 169 0 6 1023 315 0 0 0 chr15 57465261 57465296 -46029678 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1023 432 0 0 0 chr15 57465297 57465345 -46029629 + (GA)n Simple_repeat Simple_repeat 2 49 0 6 1023 609 250 62 40 chr15 57465784 57466009 -46028965 - MER33 DNA MER1_type 0 324 95 6 1023 228 330 45 9 chr15 57466198 57466308 -46028666 - L1MD2 LINE L1 -228 6131 6018 6 1023 318 273 7 0 chr15 57466371 57466532 -46028442 + (TG)n Simple_repeat Simple_repeat 1 162 0 6 1023 321 26 0 0 chr15 57466532 57466569 -46028405 + (GA)n Simple_repeat Simple_repeat 1 38 0 6 1023 434 356 0 0 chr15 57466576 57466935 -46028039 + (TG)n Simple_repeat Simple_repeat 1 359 0 6 1023 667 236 13 7 chr15 57466944 57467093 -46027881 - B4A SINE B4 -4 288 139 6 1023 940 308 67 43 chr15 57467103 57467711 -46027263 - L1ME1 LINE L1 -292 5887 5265 6 1023 729 160 23 0 chr15 57467717 57467848 -46027126 + B1_Mus2 SINE Alu 9 142 -5 6 1023 234 209 183 76 chr15 57467862 57468022 -46026952 - L1MD LINE L1 -873 5273 5098 6 1023 450 53 0 0 chr15 57468022 57468079 -46026895 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 6 1023 234 209 183 76 chr15 57468079 57468115 -46026859 - L1MD LINE L1 -1049 5097 5057 6 1023 360 0 0 0 chr15 57468936 57468976 -46025998 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1023 267 31 0 0 chr15 57468976 57469008 -46025966 + (TATG)n Simple_repeat Simple_repeat 2 33 0 6 1023 530 29 15 0 chr15 57470131 57470199 -46024775 + (TG)n Simple_repeat Simple_repeat 2 70 0 6 1023 209 341 136 17 chr15 57470319 57470495 -46024479 - MIRb SINE MIR -69 199 3 6 1023 1958 172 25 11 chr15 57472495 57472854 -46022120 - ORR1B2 LTR MaLR -2 365 2 6 1023 263 328 61 23 chr15 57473721 57473852 -46021122 + MLT1J LTR MaLR 44 179 -333 6 1023 4394 44 2 2 chr15 57474837 57475362 -46019612 - L1Md_F2 LINE L1 -1 6581 6057 6 1023 266 274 35 12 chr15 57475367 57475452 -46019522 - MIRb SINE MIR -47 221 135 6 1023 530 237 45 30 chr15 57475564 57475730 -46019244 - B3 SINE B2 -1 194 30 6 1023 285 29 0 0 chr15 57476987 57477021 -46017953 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1023 360 0 0 0 chr15 57477021 57477060 -46017914 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 1023 414 0 0 0 chr15 57477947 57477993 -46016981 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 1023 341 341 52 105 chr15 57478003 57478403 -46016571 - MLT1D LTR MaLR -85 420 42 6 1023 232 320 92 51 chr15 57479149 57479366 -46015608 - MIRc SINE MIR -39 229 4 7 1023 474 290 76 19 chr15 57479944 57480155 -46014819 - MLT1C LTR MaLR -16 451 229 7 1023 429 235 68 17 chr15 57480909 57481026 -46013948 + B4 SINE B4 2 124 -168 7 1023 1329 73 0 0 chr15 57482442 57482620 -46012354 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 7 1023 564 295 62 65 chr15 57482991 57483281 -46011693 + ORR1E LTR MaLR 10 298 -61 7 1023 242 249 95 113 chr15 57484210 57484246 -46010728 + MER33 DNA MER1_type 34 67 -257 7 1023 954 239 9 5 chr15 57484246 57484460 -46010514 + B3 SINE B2 2 216 0 7 1023 242 249 95 113 chr15 57484460 57484645 -46010329 + MER33 DNA MER1_type 68 251 -73 7 1023 280 286 124 0 chr15 57484827 57484932 -46010042 + PB1D7 SINE Alu 2 119 -1 7 1023 377 230 0 0 chr15 57484932 57485006 -46009968 + RSINE1 SINE B4 2 75 -90 7 1023 477 0 0 0 chr15 57485026 57485079 -46009895 + (TC)n Simple_repeat Simple_repeat 1 53 0 7 1023 715 322 14 22 chr15 57485251 57485528 -46009446 + B4A SINE B4 1 267 -25 7 1023 387 41 0 0 chr15 57485533 57485582 -46009392 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 1023 598 254 70 19 chr15 57487066 57487279 -46007695 - ORR1E LTR MaLR -117 242 19 7 1023 192 77 0 0 chr15 57488218 57488244 -46006730 + (TTC)n Simple_repeat Simple_repeat 1 26 0 7 1023 320 245 110 52 chr15 57488642 57488797 -46006177 - MER53 DNA hAT -5 188 25 7 1023 459 306 94 34 chr15 57489256 57489523 -46005451 + B4 SINE B4 6 288 -4 7 1023 2032 204 38 24 chr15 57489931 57490353 -46004621 + Lx7 LINE L1 6990 7417 -279 7 1023 369 0 0 0 chr15 57490368 57490409 -46004565 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1023 543 179 29 15 chr15 57490430 57490566 -46004408 + Lx7 LINE L1 7559 7696 0 7 1023 618 39 0 0 chr15 57490570 57490647 -46004327 + (CATA)n Simple_repeat Simple_repeat 2 78 0 7 1023 233 318 57 31 chr15 57490828 57490987 -46003987 + MIRc SINE MIR 106 268 0 7 1023 22 35 0 0 chr15 57491265 57491294 -46003680 + AT_rich Low_complexity Low_complexity 1 29 0 7 1023 334 333 0 34 chr15 57491849 57491967 -46003007 + Lx8 LINE L1 7077 7190 -283 7 1023 198 328 0 45 chr15 57492011 57492078 -46002896 - MIR SINE MIR -61 147 84 7 1023 270 268 63 31 chr15 57493294 57493421 -46001553 + L1MD1 LINE L1 6112 6242 0 7 1023 412 259 74 26 chr15 57493997 57494187 -46000787 - MIRc SINE MIR -67 201 2 7 1023 304 303 40 10 chr15 57495164 57495264 -45999710 - MIRb SINE MIR -109 159 57 7 1023 285 329 0 0 chr15 57495400 57495479 -45999495 + ID4 SINE ID 3 81 -2 7 1023 370 309 150 19 chr15 57495890 57496157 -45998817 + RMER15 LTR ERVL 274 575 0 7 1023 543 31 0 0 chr15 57496385 57496450 -45998524 + (TG)n Simple_repeat Simple_repeat 2 66 0 7 1023 938 302 22 7 chr15 57496453 57496723 -45998251 - B4 SINE B4 -18 274 1 7 1023 7551 26 0 0 chr15 57496870 57497728 -45997246 + L1Md_A LINE L1 5725 6582 0 7 1023 359 239 11 0 chr15 57498341 57498433 -45996541 - BC1_Mm scRNA scRNA -58 94 2 7 1023 718 248 34 43 chr15 57498619 57498826 -45996148 - B4 SINE B4 0 292 88 7 1023 207 162 0 0 chr15 57498910 57498947 -45996027 + A-rich Low_complexity Low_complexity 2 38 0 7 1023 733 239 25 99 chr15 57499460 57499702 -45995272 + B4A SINE B4 1 224 -68 7 1023 807 202 128 0 chr15 57499771 57499989 -45994985 + Lx8 LINE L1 7013 7258 -215 7 1023 292 317 172 0 chr15 57500009 57500154 -45994820 + Lx8 LINE L1 7279 7448 -25 1 1023 365 224 0 15 chr15 57500187 57500255 -45994719 + B4A SINE B4 223 289 -3 2 1023 22 0 0 0 chr15 57500303 57500325 -45994649 + AT_rich Low_complexity Low_complexity 1 22 0 3 1023 300 305 82 31 chr15 57500436 57500534 -45994440 - MER2 DNA MER2_type -215 130 28 4 1023 443 246 154 15 chr15 57500574 57500710 -45994264 - RSINE1 SINE B4 -8 157 3 5 1023 252 0 0 0 chr15 57500737 57500765 -45994209 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 6 1023 288 343 119 27 chr15 57501264 57501483 -45993491 + ORR1E LTR MaLR 1 239 -120 7 1023 227 270 135 106 chr15 57501504 57501645 -45993329 + ORR1E LTR MaLR 230 374 -5 7 1023 309 302 22 44 chr15 57501695 57501830 -45993144 - MIR SINE MIR -57 205 74 8 1023 256 271 0 91 chr15 57502166 57502184 -45992790 + B4 SINE B4 75 85 -207 9 1023 356 259 32 3 chr15 57502184 57502299 -45992675 + B1F SINE Alu 1 117 0 1 1023 2193 238 68 22 chr15 57502311 57502999 -45991975 - Lx7 LINE L1 0 7696 6872 1 1023 690 203 7 20 chr15 57503011 57503162 -45991812 + B1_Mur3 SINE Alu 1 149 0 1 1023 22 0 0 0 chr15 57503228 57503250 -45991724 + AT_rich Low_complexity Low_complexity 1 22 0 1 1023 851 199 58 34 chr15 57503665 57503873 -45991101 + Lx7 LINE L1 6977 7189 -507 1 1023 500 240 0 10 chr15 57503902 57504003 -45990971 + RSINE1 SINE B4 35 134 -31 1 1023 207 0 0 0 chr15 57504025 57504048 -45990926 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1023 547 51 12 12 chr15 57504066 57504146 -45990828 + (GGAA)n Simple_repeat Simple_repeat 4 83 0 1 1023 510 17 0 0 chr15 57505314 57505373 -45989601 + (TC)n Simple_repeat Simple_repeat 1 59 0 1 1023 412 18 35 0 chr15 57505373 57505429 -45989545 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 1023 3881 39 4 11 chr15 57506165 57506632 -45988342 - L1Md_F2 LINE L1 -144 5739 5276 2 1023 7265 27 19 0 chr15 57506632 57507479 -45987495 + L1Md_F2 LINE L1 5720 6582 0 2 1023 1195 68 0 0 chr15 57507493 57507639 -45987335 + B1_Mm SINE Alu 2 147 0 2 1023 536 311 62 72 chr15 57507684 57507886 -45987088 + L1M2 LINE L1 2145 2349 -4500 2 1023 467 208 49 97 chr15 57507886 57508030 -45986944 + B1_Mur2 SINE Alu 5 141 -8 2 1023 536 311 62 72 chr15 57508030 57508260 -45986714 + L1M2 LINE L1 2350 2573 -4276 2 1023 337 255 46 101 chr15 57508322 57508431 -45986543 + MT2B LTR ERVL 155 257 -344 2 1023 821 213 0 0 chr15 57508334 57508475 -45986499 + B1_Mur2 SINE Alu 8 148 -1 2 1023 1810 128 31 22 chr15 57508596 57508915 -45986059 - RLTRETN_Mm LTR ERVK 0 322 1 2 1023 943 246 65 21 chr15 57508968 57509259 -45985715 + L1MA6 LINE L1 5682 5985 -315 2 1023 310 319 117 0 chr15 57509441 57509535 -45985439 + PB1D10 SINE Alu 4 108 -9 2 1023 317 239 44 35 chr15 57509594 57509707 -45985267 + L1MA6 LINE L1 6156 6269 -22 2 1023 1407 251 172 23 chr15 57509751 57510522 -45984452 + L1MD2 LINE L1 2448 3333 -2813 2 1023 2246 158 85 57 chr15 57510526 57511022 -45983952 + RLTR28 LTR ERVL 1 510 -14 3 1023 28 29 0 0 chr15 57511153 57511188 -45983786 + AT_rich Low_complexity Low_complexity 1 35 0 3 1023 415 341 22 29 chr15 57511383 57511519 -45983455 + RSINE1 SINE B4 11 145 -20 3 1023 1883 178 15 12 chr15 57511576 57511884 -45983090 + MTB_Mm LTR MaLR 1 313 -94 3 1023 3041 119 223 31 chr15 57511884 57512151 -45982823 - RMER6C LTR ERVK 0 690 418 3 1023 330 26 0 0 chr15 57512151 57512190 -45982784 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 1023 3041 119 223 31 chr15 57512190 57512501 -45982473 - RMER6C LTR ERVK -273 417 2 3 1023 1883 178 15 12 chr15 57512501 57512517 -45982457 + MTB_Mm LTR MaLR 314 326 -81 3 1023 778 273 35 26 chr15 57512518 57512744 -45982230 - MTD LTR MaLR -187 232 5 3 1023 1172 74 0 13 chr15 57512745 57512895 -45982079 + B1_Mus1 SINE Alu 1 148 0 3 1023 260 55 73 0 chr15 57512903 57512958 -45982016 + (CAAAA)n Simple_repeat Simple_repeat 3 61 0 3 1023 789 291 153 14 chr15 57512999 57513438 -45981536 + L1MD2 LINE L1 5563 6062 -297 2 1023 313 240 42 104 chr15 57513547 57513691 -45981283 + L1MD2 LINE L1 6103 6237 -5 2 1023 447 19 0 0 chr15 57513757 57513809 -45981165 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1023 630 301 35 20 chr15 57513848 57514051 -45980923 - B4A SINE B4 -86 206 1 4 1023 306 0 0 0 chr15 57514103 57514137 -45980837 + (TC)n Simple_repeat Simple_repeat 1 34 0 4 1023 327 227 182 0 chr15 57514137 57514225 -45980749 - PB1D10 SINE Alu -13 104 1 4 1023 412 312 94 40 chr15 57514741 57514965 -45980009 - MLT1D LTR MaLR -8 497 262 4 1023 596 277 48 26 chr15 57514984 57515173 -45979801 - MLT1D LTR MaLR -312 193 1 4 1023 397 309 81 77 chr15 57515489 57515710 -45979264 - MTEa LTR MaLR -157 222 1 4 1023 827 350 101 12 chr15 57515715 57516132 -45978842 - MLT1G LTR MaLR -76 515 62 4 1023 226 371 15 36 chr15 57516304 57516441 -45978533 - RMER15 LTR ERVL -14 561 428 4 1023 330 26 0 0 chr15 57516455 57516494 -45978480 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1023 453 161 46 0 chr15 57516497 57516584 -45978390 - Lx9 LINE L1 -169 7475 7385 4 1023 239 320 0 37 chr15 57516598 57516705 -45978269 + Lx9 LINE L1 7531 7633 -11 4 1023 40 49 0 0 chr15 57516705 57516766 -45978208 + AT_rich Low_complexity Low_complexity 1 61 0 5 1023 329 308 9 27 chr15 57516766 57516876 -45978098 - RMER15 LTR ERVL -169 406 299 4 1023 281 289 71 10 chr15 57517185 57517283 -45977691 - MLT1H2 LTR MaLR -10 479 376 5 1023 513 285 24 42 chr15 57517396 57517561 -45977413 - RSINE1 SINE B4 0 165 4 5 1023 264 299 67 37 chr15 57517773 57517937 -45977037 + MIR SINE MIR 38 210 -58 5 1023 549 369 87 32 chr15 57517972 57518350 -45976624 + MLT1I LTR MaLR 13 411 0 5 1023 357 282 29 41 chr15 57518429 57518569 -45976405 + PB1D10 SINE Alu 13 146 -3 5 1023 1473 44 11 21 chr15 57518577 57518764 -45976210 - B2_Mm2 SINE B2 -9 186 2 5 1023 444 19 0 0 chr15 57519151 57519204 -45975770 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1023 870 164 131 11 chr15 57519222 57519413 -45975561 + B3 SINE B2 2 215 -1 5 1023 23 54 0 0 chr15 57519512 57519549 -45975425 + AT_rich Low_complexity Low_complexity 1 37 0 5 1023 194 346 0 80 chr15 57519787 57519875 -45975099 - MIR SINE MIR -75 187 107 6 1023 341 222 14 0 chr15 57520549 57520621 -45974353 - ID4 SINE ID -10 73 1 6 1023 291 28 0 0 chr15 57520655 57520691 -45974283 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 6 1023 245 247 85 12 chr15 57520751 57520833 -45974141 - L2a LINE L2 -73 3353 3266 6 1023 369 58 0 0 chr15 57520880 57520932 -45974042 + (A)n Simple_repeat Simple_repeat 1 52 0 6 1023 212 271 67 17 chr15 57520993 57521053 -45973921 + PB1D9 SINE Alu 46 108 -12 6 1023 429 20 0 0 chr15 57521068 57521118 -45973856 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1023 399 348 67 34 chr15 57521122 57521330 -45973644 + B4 SINE B4 24 238 -54 6 1023 333 0 0 0 chr15 57521334 57521371 -45973603 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 1023 184 345 0 56 chr15 57521793 57521882 -45973092 + MIR SINE MIR 29 112 -150 6 1023 1013 185 82 0 chr15 57521893 57522088 -45972886 - B3 SINE B2 -5 211 1 7 1023 246 298 81 24 chr15 57522089 57522213 -45972761 + MIRb SINE MIR 99 229 -39 7 1023 226 198 148 0 chr15 57522326 57522389 -45972585 + MIR SINE MIR 73 154 -122 7 1023 480 294 104 25 chr15 57522420 57522449 -45972525 + Charlie1 DNA MER1_type 12 41 -2740 7 1023 354 23 0 0 chr15 57522449 57522492 -45972482 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 1023 480 294 104 25 chr15 57522492 57522664 -45972310 + Charlie1 DNA MER1_type 42 229 -2552 7 1023 564 89 0 0 chr15 57522664 57522743 -45972231 + (TC)n Simple_repeat Simple_repeat 1 79 0 7 1023 312 48 0 0 chr15 57522745 57522787 -45972187 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 7 1023 260 223 43 2 chr15 57522808 57522890 -45972084 + L1MA4 LINE L1 5855 5938 -362 7 1023 270 209 0 0 chr15 57522918 57522961 -45972013 + RSINE1 SINE B4 2 44 -121 7 1023 678 58 0 0 chr15 57523005 57523092 -45971882 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 7 1023 384 22 0 0 chr15 57523154 57523199 -45971775 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 1023 378 310 94 94 chr15 57523239 57523399 -45971575 - B3A SINE B2 -30 168 9 8 1023 1235 214 188 9 chr15 57523877 57524222 -45970752 - MTD LTR MaLR 0 419 13 8 1023 441 54 0 0 chr15 57525181 57525237 -45969737 + (CA)n Simple_repeat Simple_repeat 1 56 0 8 1023 201 74 0 0 chr15 57525602 57525629 -45969345 + (A)n Simple_repeat Simple_repeat 1 27 0 8 1023 375 121 0 0 chr15 57526266 57526324 -45968650 + (T)n Simple_repeat Simple_repeat 1 58 0 8 1023 231 36 0 0 chr15 57526363 57526391 -45968583 + (TCTG)n Simple_repeat Simple_repeat 1 28 0 8 1023 246 62 0 0 chr15 57526741 57526773 -45968201 + (T)n Simple_repeat Simple_repeat 1 32 0 8 1023 213 205 0 0 chr15 57527130 57527169 -45967805 + C-rich Low_complexity Low_complexity 5 43 0 8 1023 29 28 0 0 chr15 57527253 57527289 -45967685 + GC_rich Low_complexity Low_complexity 1 36 0 8 1023 263 319 60 34 chr15 57528805 57528954 -45966020 - MIRb SINE MIR -28 240 88 9 1023 538 273 84 17 chr15 57529180 57529359 -45965615 - MIR SINE MIR 0 262 72 9 1023 206 298 150 63 chr15 57529485 57529739 -45965235 - L2c LINE L2 -44 3343 3068 9 1023 645 306 11 28 chr15 57530466 57530644 -45964330 + B4A SINE B4 115 289 -3 9 1023 183 67 43 43 chr15 57531038 57531085 -45963889 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 9 1023 213 370 72 10 chr15 57532650 57532844 -45962130 - MIRb SINE MIR -23 245 40 9 1023 252 0 0 0 chr15 57533949 57533977 -45960997 + (CTG)n Simple_repeat Simple_repeat 2 29 0 9 1023 295 284 34 68 chr15 57534230 57534347 -45960627 + PB1 SINE Alu 3 115 -12 9 1023 288 111 0 0 chr15 57534360 57534405 -45960569 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 9 1023 291 61 33 0 chr15 57535248 57535292 -45959682 - PB1D10 SINE Alu -51 98 51 9 1023 679 291 100 43 chr15 57535347 57535788 -45959186 - L1MB7 LINE L1 -40 6144 5679 1 1023 418 165 282 0 chr15 57535821 57535924 -45959050 - B1F SINE Alu 0 149 18 1 1023 253 279 32 32 chr15 57535874 57535937 -45959037 - B4A SINE B4 -140 152 90 1 1023 456 19 0 0 chr15 57536473 57536526 -45958448 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1023 423 0 0 0 chr15 57537622 57537669 -45957305 + (CCTG)n Simple_repeat Simple_repeat 1 47 0 1 1023 271 214 4 91 chr15 57537920 57538007 -45956967 + PB1D10 SINE Alu 12 93 -56 1 1023 265 310 118 14 chr15 57538126 57538270 -45956704 - MIRb SINE MIR -101 167 9 1 1023 977 290 18 73 chr15 57538617 57539015 -45955959 + MTE2a LTR MaLR 2 377 -2 1 1023 231 250 27 27 chr15 57539032 57539106 -45955868 - MLT1J1 LTR MaLR -9 435 362 1 1023 198 0 0 0 chr15 57539666 57539688 -45955286 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1 1023 528 82 129 30 chr15 57540337 57540438 -45954536 + L1Md_F2 LINE L1 6469 6579 -3 1 1024 180 217 0 61 chr15 57540633 57540682 -45954292 - MIR3 SINE MIR -37 171 126 1 1024 381 95 238 0 chr15 57541120 57541204 -45953770 + B1_Mus2 SINE Alu 43 146 -1 1 1024 255 239 0 0 chr15 57541305 57541351 -45953623 + B1F SINE Alu 75 120 -29 1 1024 279 0 0 0 chr15 57541356 57541387 -45953587 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1024 651 274 141 42 chr15 57541407 57541495 -45953479 - B4A SINE B4 -1 291 206 1 1024 1162 71 93 12 chr15 57541495 57541507 -45953467 - B2_Mm1a SINE B2 -6 187 176 1 1024 243 0 0 0 chr15 57541507 57541534 -45953440 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 1 1024 1162 71 93 12 chr15 57541534 57541693 -45953281 - B2_Mm1a SINE B2 -18 175 2 1 1024 651 274 141 42 chr15 57541693 57541867 -45953107 - B4A SINE B4 -87 205 3 1 1024 276 186 0 0 chr15 57542688 57542747 -45952227 + GA-rich Low_complexity Low_complexity 4 62 0 1 1024 322 274 36 36 chr15 57544883 57544993 -45949981 + MER5B DNA MER1_type 1 110 -68 1 1024 186 365 12 12 chr15 57545048 57545134 -45949840 + L2a LINE L2 3298 3383 -43 1 1024 224 306 181 27 chr15 57545419 57545607 -45949367 - MIRb SINE MIR -45 223 7 1 1024 385 314 149 33 chr15 57545732 57545946 -45949028 - LTR16C LTR ERVL 0 489 251 1 1024 200 103 33 33 chr15 57546192 57546252 -45948722 + A-rich Low_complexity Low_complexity 1 60 0 1 1024 2688 272 105 22 chr15 57547452 57548331 -45946643 - RCHARR1 DNA MER1_type -20 954 3 1 1024 228 323 0 0 chr15 57549217 57549279 -45945695 + MIRb SINE MIR 194 255 -13 1 1024 1261 240 41 27 chr15 57550348 57550716 -45944258 - MTEa LTR MaLR -2 377 5 1 1024 198 382 22 0 chr15 57550805 57550894 -45944080 + L3 LINE CR1 3988 4078 -411 1 1024 250 283 93 86 chr15 57550937 57551088 -45943886 - LTR79 LTR ERVL 0 527 376 1 1024 227 325 103 57 chr15 57551485 57551844 -45943130 - L2a LINE L2 0 3426 2965 1 1024 233 342 60 72 chr15 57551938 57552105 -45942869 - MIR3 SINE MIR -21 187 23 1 1024 189 333 95 24 chr15 57552459 57552585 -45942389 - MIR3 SINE MIR -36 172 38 1 1024 2146 95 6 57 chr15 57552976 57553312 -45941662 - ORR1A2 LTR MaLR -8 319 1 1 1024 237 309 78 16 chr15 57553317 57553445 -45941529 - MIRb SINE MIR -42 226 91 1 1024 269 263 8 88 chr15 57554843 57554968 -45940006 + ORSL DNA Tip100 161 275 0 1 1024 202 329 81 12 chr15 57555003 57555089 -45939885 - MIRc SINE MIR -95 173 82 1 1024 489 272 84 31 chr15 57555227 57555429 -45939545 - MLT1J1 LTR MaLR -156 292 64 1 1024 2238 148 72 8 chr15 57556394 57556782 -45938192 - MTC LTR MaLR -8 413 1 1 1024 297 169 17 0 chr15 57557206 57557265 -45937709 + MTC LTR MaLR 242 301 -120 1 1024 207 108 0 51 chr15 57557373 57557412 -45937562 + (CTG)n Simple_repeat Simple_repeat 2 38 0 1 1024 655 199 164 16 chr15 57558046 57558235 -45936739 + ID_B1 SINE B4 3 219 -5 1 1024 486 0 0 0 chr15 57558722 57558776 -45936198 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1024 262 329 0 35 chr15 57559337 57559362 -45935612 + B4A SINE B4 59 83 -209 1 1024 288 0 0 0 chr15 57559362 57559394 -45935580 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1024 311 210 36 13 chr15 57559399 57559495 -45935479 + B1_Mus2 SINE Alu 2 102 -18 1 1024 387 0 0 0 chr15 57561972 57562015 -45932959 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1024 725 228 188 11 chr15 57562058 57562110 -45932864 - ID_B1 SINE B4 -1 223 156 1 1024 450 0 0 0 chr15 57562110 57562160 -45932814 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1024 725 228 188 11 chr15 57562160 57562293 -45932681 - ID_B1 SINE B4 -69 155 5 1 1024 201 244 83 24 chr15 57562745 57562829 -45932145 + MIR3 SINE MIR 88 176 -32 1 1024 779 278 39 46 chr15 57562872 57563155 -45931819 - MLT1A LTR MaLR -54 320 40 1 1024 21 36 0 0 chr15 57563582 57563610 -45931364 + AT_rich Low_complexity Low_complexity 1 28 0 1 1024 189 107 0 0 chr15 57566918 57566946 -45928028 + (AGGGGG)n Simple_repeat Simple_repeat 2 29 0 1 1024 368 186 186 0 chr15 57567629 57567715 -45927259 + PB1D10 SINE Alu 8 109 -8 1 1024 766 163 58 7 chr15 57568189 57568358 -45926616 + B3 SINE B2 9 192 -6 1 1024 436 260 0 20 chr15 57569742 57569840 -45925134 + ID_B1 SINE B4 121 216 -8 1 1024 465 133 0 0 chr15 57570194 57570269 -45924705 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 1024 379 348 82 32 chr15 57571396 57571620 -45923354 + MIR SINE MIR 9 238 -24 1 1024 195 260 182 30 chr15 57573029 57573128 -45921846 - MIRc SINE MIR -58 210 97 1 1024 258 306 67 67 chr15 57573237 57573356 -45921618 + MIR3 SINE MIR 48 166 -42 1 1024 374 289 81 7 chr15 57573631 57573767 -45921207 - MER5A DNA MER1_type 0 189 44 1 1024 351 333 95 0 chr15 57573902 57574028 -45920946 + B4A SINE B4 2 139 -153 1 1024 257 316 13 0 chr15 57574347 57574426 -45920548 + (CA)n Simple_repeat Simple_repeat 2 81 0 1 1024 288 0 0 0 chr15 57575192 57575224 -45919750 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 1024 450 36 0 0 chr15 57575224 57575279 -45919695 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1024 224 167 21 0 chr15 57575347 57575395 -45919579 + CT-rich Low_complexity Low_complexity 1 49 0 1 1024 784 114 0 15 chr15 57575386 57575519 -45919455 + (TTC)n Simple_repeat Simple_repeat 3 133 0 1 1024 527 29 14 0 chr15 57575522 57575591 -45919383 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1024 292 211 197 0 chr15 57575888 57575964 -45919010 + ID_B1 SINE B4 105 195 -29 1 1024 289 274 0 0 chr15 57576014 57576076 -45918898 + MIR SINE MIR 73 134 -128 1 1024 429 20 0 0 chr15 57576618 57576668 -45918306 + (CAGA)n Simple_repeat Simple_repeat 2 51 0 1 1024 891 117 0 0 chr15 57578891 57579062 -45915912 + (TG)n Simple_repeat Simple_repeat 1 171 0 1 1024 305 145 16 0 chr15 57579074 57579136 -45915838 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 1024 310 371 0 0 chr15 57579816 57579913 -45915061 + RMER15 LTR ERVL 371 467 -108 1 1024 363 96 0 0 chr15 57579943 57579995 -45914979 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 1024 189 307 164 17 chr15 57580283 57580399 -45914575 - MIRb SINE MIR -56 212 80 1 1024 192 257 161 62 chr15 57581478 57581590 -45913384 - MIRc SINE MIR -59 209 87 1 1024 197 336 118 75 chr15 57581747 57581908 -45913066 - MIRb SINE MIR -33 235 68 1 1024 366 23 0 0 chr15 57582361 57582404 -45912570 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 1024 1044 101 0 0 chr15 57582404 57582543 -45912431 - B1_Mur4 SINE Alu -10 140 2 1 1024 288 0 0 0 chr15 57583296 57583328 -45911646 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 1024 252 122 0 0 chr15 57583329 57583370 -45911604 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1024 1250 298 47 49 chr15 57583372 57584137 -45910837 - Lx8 LINE L1 -1556 5917 5169 1 1024 294 29 0 0 chr15 57585403 57585438 -45909536 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1024 216 0 0 0 chr15 57585897 57585921 -45909053 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1024 487 304 68 0 chr15 57586044 57586205 -45908769 + MIR SINE MIR 41 212 -50 1 1024 342 0 0 0 chr15 57586615 57586653 -45908321 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1024 279 0 0 0 chr15 57587078 57587109 -45907865 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1024 301 300 74 16 chr15 57587456 57587578 -45907396 - L1MC4a LINE L1 -1730 6152 6024 1 1024 281 160 0 20 chr15 57587578 57587629 -45907345 + C-rich Low_complexity Low_complexity 5 54 0 1 1024 630 287 97 41 chr15 57588408 57588604 -45906370 - B4 SINE B4 -2 290 84 1 1024 243 0 0 0 chr15 57588627 57588654 -45906320 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1024 214 315 176 46 chr15 57588750 57588903 -45906071 - B4A SINE B4 -59 233 61 1 1024 988 132 218 0 chr15 57589315 57589489 -45905485 - B3 SINE B2 -3 213 2 1 1024 1009 129 157 15 chr15 57589958 57590155 -45904819 + URR1B DNA MER1_type 1 225 0 1 1024 2382 135 8 33 chr15 57590885 57591277 -45903697 - MTB_Mm LTR MaLR 0 407 26 1 1024 1558 37 0 51 chr15 57591483 57591680 -45903294 + B2_Mm1a SINE B2 2 188 -5 1 1024 1221 104 39 0 chr15 57591758 57591940 -45903034 + B2_Mm2 SINE B2 5 193 -2 1 1024 1900 263 14 39 chr15 57591956 57592470 -45902504 + Lx6 LINE L1 6934 7434 -26 1 1024 423 0 0 0 chr15 57592739 57592786 -45902188 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1024 333 0 0 0 chr15 57593604 57593641 -45901333 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1024 267 314 39 0 chr15 57594693 57594795 -45900179 + L3 LINE CR1 4281 4386 -103 1 1024 253 250 62 0 chr15 57595623 57595687 -45899287 + L2b LINE L2 3303 3370 -5 2 1024 515 221 64 14 chr15 57595725 57595866 -45899108 + MIR SINE MIR 20 174 -102 2 1024 191 167 24 0 chr15 57596408 57596450 -45898524 + CT-rich Low_complexity Low_complexity 2 44 0 2 1024 231 233 0 99 chr15 57596652 57596733 -45898241 - MLT1A1 LTR MaLR 0 408 336 2 1024 234 62 0 0 chr15 57597577 57597609 -45897365 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 2 1024 231 324 43 51 chr15 57598539 57598656 -45896318 + MIR SINE MIR 115 230 -32 2 1024 245 314 40 74 chr15 57598722 57598870 -45896104 - MIRb SINE MIR -1 267 125 2 1024 444 37 0 0 chr15 57599270 57599324 -45895650 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 1024 968 251 93 65 chr15 57600322 57600689 -45894285 + MTEa LTR MaLR 3 379 0 2 1024 219 289 155 75 chr15 57601218 57601449 -45893525 - MIR SINE MIR -39 237 13 2 1024 1518 288 11 19 chr15 57602231 57602572 -45892402 - ORR1D2 LTR MaLR -3 367 28 2 1024 2978 77 40 15 chr15 57602572 57602969 -45892005 - MTB_Mm LTR MaLR 0 407 1 2 1024 1518 288 11 19 chr15 57602969 57602995 -45891979 - ORR1D2 LTR MaLR -343 27 3 2 1024 317 267 129 95 chr15 57603053 57603169 -45891805 + PB1D7 SINE Alu 1 120 0 2 1024 187 378 25 31 chr15 57603268 57603399 -45891575 + L2a LINE L2 2925 3058 -368 2 1024 2894 44 0 90 chr15 57603399 57603800 -45891174 - RLTR10B2 LTR ERVK 0 365 1 2 1024 187 378 25 31 chr15 57603800 57603829 -45891145 + L2a LINE L2 3059 3084 -342 2 1024 435 315 161 21 chr15 57604178 57604421 -45890553 - Tigger9b DNA MER2_type -165 459 183 2 1024 499 307 44 11 chr15 57604538 57604719 -45890255 - Tigger9b DNA MER2_type -436 188 2 2 1024 1223 62 0 0 chr15 57605168 57605314 -45889660 + B1_Mus2 SINE Alu 2 147 0 2 1024 239 254 191 0 chr15 57605371 57605434 -45889540 + MER20 DNA MER1_type 29 103 -116 2 1024 332 272 248 0 chr15 57605624 57605749 -45889225 - MTEa LTR MaLR -222 157 2 2 1024 540 0 0 0 chr15 57605828 57605888 -45889086 + (GA)n Simple_repeat Simple_repeat 1 60 0 2 1024 606 304 106 3 chr15 57605915 57606199 -45888775 + L1MC2 LINE L1 5894 6206 -138 2 1024 247 225 87 130 chr15 57606237 57606375 -45888599 + MT2B LTR ERVL 107 238 -363 2 1024 381 299 88 22 chr15 57606302 57606321 -45888653 + B1F1 SINE Alu 2 147 -2 2 1024 486 274 42 8 chr15 57606321 57606439 -45888535 + ID_B1 SINE B4 103 224 0 2 1024 224 301 108 0 chr15 57606684 57606777 -45888197 - MIRb SINE MIR -114 154 52 2 1024 342 0 0 0 chr15 57606807 57606845 -45888129 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1024 236 244 0 0 chr15 57608486 57608564 -45886410 + (TTTG)n Simple_repeat Simple_repeat 3 80 0 2 1024 259 277 0 0 chr15 57608932 57608997 -45885977 - RMER1C Other Other -9 1333 1269 2 1024 3441 248 97 16 chr15 57608947 57609994 -45884980 - Lx8 LINE L1 -2 7471 6340 2 1024 262 239 0 0 chr15 57610001 57610047 -45884927 - B3A SINE B2 -140 58 13 2 1024 272 279 119 37 chr15 57610072 57610206 -45884768 + MIR SINE MIR 63 207 -55 2 1024 767 255 100 21 chr15 57610230 57610470 -45884504 - MER2 DNA MER2_type 0 345 87 2 1024 1018 261 34 51 chr15 57610554 57610849 -45884125 - B4 SINE B4 -2 290 1 2 1024 368 152 0 17 chr15 57611009 57611069 -45883905 - ORR1A4 LTR MaLR 0 329 271 2 1024 687 43 0 0 chr15 57611052 57611145 -45883829 - ORR1A4 LTR MaLR -236 93 1 2 1024 10014 156 53 57 chr15 57611145 57613116 -45881858 - ORR1A4-int LTR MaLR 0 1963 2 2 1024 2137 132 3 15 chr15 57613117 57613448 -45881526 - ORR1A4 LTR MaLR 0 329 3 2 1024 459 357 0 25 chr15 57613510 57613671 -45881303 + RSINE1 SINE B4 3 159 -6 2 1024 320 347 27 81 chr15 57613712 57613897 -45881077 - MIRm SINE MIR -14 262 88 2 1024 1390 233 94 27 chr15 57614330 57614701 -45880273 + MTD LTR MaLR 9 404 -15 2 1024 275 279 86 9 chr15 57615623 57615728 -45879246 - MIRb SINE MIR -122 146 34 2 1024 262 306 172 38 chr15 57616102 57616315 -45878659 - MIR SINE MIR 0 262 2 2 1024 1470 233 150 11 chr15 57616582 57616942 -45878032 - MTD LTR MaLR -9 410 1 2 1024 340 172 11 33 chr15 57617068 57617158 -45877816 - B1_Mus2 SINE Alu -18 129 42 2 1024 374 0 0 162 chr15 57617161 57617359 -45877615 + (CTCTG)n Simple_repeat Simple_repeat 5 170 0 2 1024 340 183 0 32 chr15 57617360 57617422 -45877552 - B1_Mur4 SINE Alu -90 60 1 2 1024 183 42 0 0 chr15 57617607 57617631 -45877343 + (TTGGGG)n Simple_repeat Simple_repeat 5 28 0 2 1024 254 231 39 0 chr15 57618146 57618198 -45876776 - PB1D7 SINE Alu -52 68 15 2 1024 709 246 68 174 chr15 57618491 57618944 -45876030 - RMER10A LTR ERVL -20 422 18 2 1024 1657 244 72 9 chr15 57619370 57619801 -45875173 - Lx6 LINE L1 -8 7452 6995 2 1024 230 273 137 50 chr15 57619801 57619940 -45875034 + RMER21A LTR ERV1 750 900 -47 2 1024 4812 199 54 7 chr15 57619940 57620033 -45874941 - Lx7 LINE L1 -849 6847 6745 2 1024 288 0 0 0 chr15 57620033 57620065 -45874909 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 1024 4812 200 57 8 chr15 57620065 57620991 -45873983 - Lx7 LINE L1 -952 6744 5781 2 1024 1141 99 117 0 chr15 57621002 57621164 -45873810 + B2_Mm2 SINE B2 1 181 -14 2 1024 590 26 0 13 chr15 57621164 57621241 -45873733 + (GA)n Simple_repeat Simple_repeat 1 76 0 2 1024 528 264 138 53 chr15 57621257 57621519 -45873455 + B4 SINE B4 26 271 -21 2 1024 611 297 15 35 chr15 57622069 57622268 -45872706 - MER20 DNA MER1_type -24 195 1 2 1024 351 287 63 39 chr15 57622417 57622544 -45872430 + B4 SINE B4 152 281 -11 2 1024 312 120 0 0 chr15 57622566 57622616 -45872358 + (TC)n Simple_repeat Simple_repeat 2 51 0 2 1024 270 73 0 0 chr15 57622616 57622657 -45872317 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1024 307 308 81 34 chr15 57622711 57622859 -45872115 + L1MDa LINE L1 335 489 -6144 2 1024 544 316 122 11 chr15 57623057 57623672 -45871302 + L1MDa LINE L1 872 1572 -5061 2 1024 308 281 61 0 chr15 57623687 57623769 -45871205 - Tigger7 DNA MER2_type -3 2488 2402 2 1024 237 357 12 23 chr15 57623760 57623846 -45871128 - Tigger7 DNA MER2_type -2195 296 212 2 1024 426 295 135 53 chr15 57624341 57624660 -45870314 - ORR1E LTR MaLR 0 359 15 2 1024 186 377 80 51 chr15 57625899 57626036 -45868938 - MIRm SINE MIR -122 154 14 2 1024 746 285 69 44 chr15 57626116 57626295 -45868679 - L1MB7 LINE L1 -36 6148 5958 2 1024 261 0 0 0 chr15 57626295 57626324 -45868650 + (TC)n Simple_repeat Simple_repeat 1 29 0 2 1024 746 285 69 44 chr15 57626324 57626507 -45868467 - L1MB7 LINE L1 -227 5957 5777 2 1024 575 236 79 78 chr15 57626563 57626803 -45868171 - RLTR11B LTR ERVK -35 493 249 2 1024 536 268 47 109 chr15 57626861 57627137 -45867837 - RLTR11B LTR ERVK -268 259 1 2 1024 405 0 0 0 chr15 57628207 57628252 -45866722 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 1024 1382 170 9 4 chr15 57628757 57628982 -45865992 + URR1A DNA MER1_type 1 226 0 2 1024 580 286 106 127 chr15 57629050 57629466 -45865508 + MLT1A1 LTR MaLR 2 408 0 2 1024 342 0 0 0 chr15 57631075 57631113 -45863861 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1024 397 304 108 81 chr15 57631768 57632065 -45862909 - LTR88c LTR Genie? -547 315 11 2 1024 369 0 0 0 chr15 57632104 57632145 -45862829 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1024 210 37 0 0 chr15 57632293 57632320 -45862654 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2 1024 271 316 38 0 chr15 57632469 57632548 -45862426 - MIR SINE MIR -71 191 110 2 1024 186 94 77 15 chr15 57632871 57632936 -45862038 + CT-rich Low_complexity Low_complexity 2 70 0 2 1024 865 312 55 10 chr15 57633200 57633507 -45861467 + MER2 DNA MER2_type 5 325 -20 2 1024 470 96 0 14 chr15 57633574 57633648 -45861326 + (TA)n Simple_repeat Simple_repeat 1 73 0 2 1024 251 296 78 78 chr15 57633684 57633889 -45861085 - L1ME1 LINE L1 -19 6160 5956 2 1024 249 247 53 27 chr15 57633943 57634018 -45860956 - L1ME1 LINE L1 -239 5885 5809 2 1024 336 243 0 0 chr15 57634561 57634635 -45860339 + L1MA9 LINE L1 6234 6307 -5 2 1024 794 260 72 0 chr15 57635354 57635562 -45859412 - ID_B1 SINE B4 0 224 2 2 1024 201 295 79 79 chr15 57635675 57635815 -45859159 + MIRm SINE MIR 50 189 -87 2 1024 433 320 71 46 chr15 57635941 57636180 -45858794 + ORR1E LTR MaLR 1 245 -114 2 1024 284 210 102 52 chr15 57636726 57636845 -45858129 + MLT1A LTR MaLR 56 187 -203 2 1024 468 279 68 36 chr15 57636917 57637084 -45857890 + ID_B1 SINE B4 72 245 -47 2 1024 266 234 187 42 chr15 57637039 57637227 -45857747 + MLT1A LTR MaLR 171 393 -15 2 1024 22 0 0 0 chr15 57637227 57637249 -45857725 + AT_rich Low_complexity Low_complexity 1 22 0 2 1024 197 345 43 60 chr15 57637532 57637649 -45857325 - MIR SINE MIR -24 238 124 2 1024 297 169 0 0 chr15 57637759 57637818 -45857156 + C-rich Low_complexity Low_complexity 1 59 0 2 1024 25 0 0 0 chr15 57638850 57638875 -45856099 + AT_rich Low_complexity Low_complexity 1 25 0 2 1024 829 196 0 20 chr15 57638889 57639035 -45855939 + B1_Mur4 SINE Alu 6 148 -2 2 1024 1045 60 33 0 chr15 57639825 57639976 -45854998 + (TCCCC)n Simple_repeat Simple_repeat 4 159 0 2 1024 598 305 57 13 chr15 57640300 57640547 -45854427 - MLT1D LTR MaLR -365 262 3 2 1024 216 0 0 0 chr15 57641110 57641134 -45853840 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1024 186 43 0 0 chr15 57641297 57641320 -45853654 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2 1024 381 22 0 0 chr15 57641711 57641757 -45853217 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1024 643 290 191 0 chr15 57641759 57641990 -45852984 - B4A SINE B4 -17 275 1 2 1024 3143 20 0 0 chr15 57642288 57642634 -45852340 - ORR1A0 LTR MaLR 0 346 1 2 1024 342 345 33 33 chr15 57644435 57644585 -45850389 + MIRb SINE MIR 40 189 -79 2 1024 672 263 23 51 chr15 57645349 57645565 -45849409 - B3 SINE B2 -6 210 1 2 1024 918 146 201 6 chr15 57646619 57646798 -45848176 - B3 SINE B2 0 216 3 2 1024 850 126 8 8 chr15 57647006 57647134 -45847840 + B1_Mus1 SINE Alu 21 148 0 2 1024 1215 61 7 0 chr15 57647137 57647284 -45847690 + B1_Mus1 SINE Alu 1 148 0 2 1024 22 0 0 0 chr15 57647284 57647306 -45847668 + AT_rich Low_complexity Low_complexity 1 22 0 2 1024 237 277 15 30 chr15 57647850 57647917 -45847057 - Charlie5 DNA MER1_type -2558 66 1 2 1024 181 314 118 24 chr15 57647970 57648097 -45846877 - L2a LINE L2 -153 3273 3135 3 1024 183 273 0 0 chr15 57648334 57648378 -45846596 - L2a LINE L2 -684 2735 2692 3 1024 946 140 14 0 chr15 57648694 57648837 -45846137 - B1_Mus1 SINE Alu -1 147 3 3 1024 24 0 0 0 chr15 57650006 57650030 -45844944 + AT_rich Low_complexity Low_complexity 1 24 0 3 1024 471 267 67 22 chr15 57650271 57650405 -45844569 + B1F1 SINE Alu 10 149 0 3 1024 510 17 0 0 chr15 57650782 57650841 -45844133 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 1024 435 322 155 95 chr15 57650904 57651168 -45843806 + B4 SINE B4 3 282 -10 3 1024 207 69 0 0 chr15 57651177 57651206 -45843768 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1024 841 218 73 0 chr15 57651238 57651417 -45843557 + B3A SINE B2 1 192 -6 3 1024 207 0 0 0 chr15 57651422 57651445 -45843529 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 1024 317 282 0 100 chr15 57651654 57651784 -45843190 + B1F SINE Alu 1 117 0 3 1024 334 308 88 29 chr15 57651928 57652065 -45842909 - L1MEg LINE L1 -4059 2025 1881 3 1024 394 284 0 52 chr15 57652074 57652189 -45842785 - PB1D10 SINE Alu -8 109 1 3 1024 198 0 0 0 chr15 57655454 57655476 -45839498 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 1024 477 0 0 0 chr15 57655488 57655541 -45839433 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 1024 246 81 0 0 chr15 57655803 57655840 -45839134 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 3 1024 297 311 120 80 chr15 57656880 57657230 -45837744 - L2c LINE L2 -1 3386 3023 3 1024 792 286 12 8 chr15 57658299 57658500 -45836474 + B4A SINE B4 70 269 -23 3 1024 180 111 0 0 chr15 57658502 57658529 -45836445 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1024 189 0 0 0 chr15 57658998 57659019 -45835955 + (CTG)n Simple_repeat Simple_repeat 3 23 0 3 1024 454 182 18 0 chr15 57659022 57659132 -45835842 + (ATG)n Simple_repeat Simple_repeat 2 113 0 3 1024 1597 42 0 5 chr15 57659450 57659640 -45835334 + B2_Mm1a SINE B2 2 190 -3 3 1024 778 238 0 0 chr15 57660213 57660356 -45834618 - B3A SINE B2 -55 143 1 3 1024 192 158 0 0 chr15 57660728 57660766 -45834208 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 1024 283 102 68 0 chr15 57660807 57660866 -45834108 + (TGAA)n Simple_repeat Simple_repeat 4 66 0 3 1024 463 190 0 14 chr15 57661155 57661294 -45833680 + GA-rich Low_complexity Low_complexity 1 137 0 3 1024 254 276 11 0 chr15 57661311 57661398 -45833576 + (TG)n Simple_repeat Simple_repeat 1 88 0 3 1024 473 252 124 70 chr15 57661657 57661956 -45833018 - L1MA4 LINE L1 -394 5906 5592 3 1024 1067 247 111 12 chr15 57662060 57662384 -45832590 - ORR1E LTR MaLR -3 356 1 3 1024 1961 108 3 54 chr15 57662439 57662752 -45832222 - ORR1A2 LTR MaLR -8 319 23 3 1024 262 356 10 19 chr15 57662759 57662862 -45832112 + Tigger1 DNA MER2_type 2317 2418 0 3 1024 643 286 113 39 chr15 57663036 57663320 -45831654 - MLT1B LTR MaLR -13 377 73 3 1024 234 154 115 0 chr15 57663385 57663437 -45831537 + MIRb SINE MIR 175 232 -36 3 1024 225 0 0 0 chr15 57663478 57663503 -45831471 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1024 305 353 109 10 chr15 57663648 57663840 -45831134 - MIRb SINE MIR -7 261 51 3 1024 239 278 74 53 chr15 57663892 57663987 -45830987 + MTD LTR MaLR 178 274 -145 3 1024 655 169 24 66 chr15 57664005 57664187 -45830787 + MTD LTR MaLR 210 405 -14 3 1024 565 206 88 75 chr15 57664687 57664913 -45830061 + L1MA10 LINE L1 6050 6278 -56 3 1024 192 40 0 0 chr15 57665503 57665528 -45829446 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 3 1024 355 45 0 0 chr15 57665529 57665573 -45829401 - ORR1A1 LTR MaLR -55 291 248 3 1024 184 212 90 101 chr15 57665807 57665896 -45829078 - L3 LINE CR1 -1904 2585 2498 3 1024 2500 66 3 0 chr15 57666127 57666444 -45828530 + ORR1A2 LTR MaLR 2 319 -8 3 1024 231 114 0 0 chr15 57666680 57666715 -45828259 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 3 1024 186 118 0 0 chr15 57666846 57666880 -45828094 + (TTTTTG)n Simple_repeat Simple_repeat 4 37 0 3 1024 1628 178 79 50 chr15 57668172 57668204 -45826770 + RMER13A LTR ERVK 2 28 -832 3 1024 3600 13 2 0 chr15 57668204 57668599 -45826375 - MTA_Mm LTR MaLR 0 396 1 3 1024 1628 217 226 34 chr15 57668599 57669143 -45825831 + RMER13A LTR ERVK 29 684 -176 3 1024 573 195 91 30 chr15 57669417 57669532 -45825442 + RSINE1 SINE B4 4 129 -36 3 1024 216 0 0 0 chr15 57669532 57669556 -45825418 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1024 573 195 91 30 chr15 57669556 57669572 -45825402 + RSINE1 SINE B4 130 143 -22 3 1024 610 312 81 61 chr15 57669644 57669989 -45824985 - ORR1E LTR MaLR -1 358 7 3 1024 207 0 0 0 chr15 57670510 57670533 -45824441 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 3 1024 195 162 0 0 chr15 57671074 57671111 -45823863 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 15 296 321 16 118 chr15 57671578 57671705 -45823269 - MLT1J1 LTR MaLR -300 144 31 3 1025 389 20 20 0 chr15 57672664 57672714 -45822260 + (CCCCCA)n Simple_repeat Simple_repeat 2 52 0 3 1025 402 161 0 0 chr15 57672720 57672782 -45822192 - ORR1D1 LTR MaLR 0 374 313 3 1025 656 141 8 0 chr15 57672819 57672940 -45822034 + (GGGA)n Simple_repeat Simple_repeat 1 122 0 3 1025 807 70 0 0 chr15 57675814 57675929 -45819045 + (TG)n Simple_repeat Simple_repeat 2 116 0 3 1025 220 304 0 18 chr15 57675954 57676011 -45818963 + (CG)n Simple_repeat Simple_repeat 2 57 0 3 1025 334 312 147 8 chr15 57676011 57676140 -45818834 - B4A SINE B4 -23 269 123 3 1025 528 318 104 30 chr15 57676752 57676953 -45818021 + ID_B1 SINE B4 5 220 -4 3 1025 267 383 48 30 chr15 57678172 57678339 -45816635 + MIR3 SINE MIR 36 205 -3 3 1025 2036 196 111 78 chr15 57678488 57679037 -45815937 - RMER2 LTR ERV1 0 567 1 3 1025 300 276 72 99 chr15 57679494 57679675 -45815299 - MIRb SINE MIR -76 192 17 3 1025 196 375 100 15 chr15 57680149 57680279 -45814695 + L2b LINE L2 3219 3359 -16 3 1025 415 202 9 9 chr15 57680279 57680394 -45814580 + GA-rich Low_complexity Low_complexity 3 117 0 3 1025 233 290 80 53 chr15 57681370 57681483 -45813491 + MIRb SINE MIR 91 206 -62 3 1025 455 293 32 0 chr15 57681516 57681639 -45813335 + ID_B1 SINE B4 96 222 -2 3 1025 2948 170 29 0 chr15 57682017 57682529 -45812445 + Lx9 LINE L1 6746 7272 -372 3 1025 841 244 171 5 chr15 57682529 57682751 -45812223 - MTD LTR MaLR -160 259 1 3 1025 581 229 186 35 chr15 57682786 57682958 -45812016 - B3 SINE B2 -7 209 12 3 1025 213 328 28 105 chr15 57683681 57683824 -45811150 + L2c LINE L2 3256 3387 0 3 1025 263 87 43 0 chr15 57683863 57683909 -45811065 + (TGAA)n Simple_repeat Simple_repeat 4 51 0 3 1025 256 336 16 8 chr15 57683910 57684039 -45810935 + (TAGA)n Simple_repeat Simple_repeat 1 130 0 3 1025 272 282 14 0 chr15 57683966 57684037 -45810937 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 3 1025 1108 240 173 7 chr15 57684068 57684374 -45810600 + ORR1E LTR MaLR 3 359 0 3 1025 248 157 0 73 chr15 57684466 57684521 -45810453 + 4.5SRNA scRNA scRNA 36 86 -8 3 1025 797 66 0 19 chr15 57684472 57684580 -45810394 + B1_Mm SINE Alu 41 146 -1 3 1025 933 128 0 0 chr15 57684580 57684728 -45810246 + (GGAA)n Simple_repeat Simple_repeat 3 150 0 3 1025 190 308 39 0 chr15 57685279 57685357 -45809617 - L2a LINE L2 -4 3422 3342 3 1025 241 48 71 0 chr15 57685838 57685880 -45809094 + (GTTTG)n Simple_repeat Simple_repeat 2 46 0 3 1025 459 0 0 0 chr15 57686305 57686356 -45808618 + (CCCCAG)n Simple_repeat Simple_repeat 4 54 0 3 1025 840 137 0 0 chr15 57686356 57686495 -45808479 + (TCCC)n Simple_repeat Simple_repeat 2 140 0 3 1025 337 311 68 59 chr15 57686929 57687141 -45807833 - MIRb SINE MIR -50 218 2 3 1025 1808 169 112 12 chr15 57687672 57688074 -45806900 + RMER10A LTR ERVL 1 442 0 3 1025 466 295 26 20 chr15 57688446 57688598 -45806376 + MTD LTR MaLR 45 197 -222 3 1025 354 263 144 0 chr15 57688614 57688732 -45806242 + MLT1N2 LTR MaLR 356 490 -72 3 1025 247 287 72 24 chr15 57689102 57689227 -45805747 - L1M5 LINE L1 -432 5808 5678 3 1025 210 306 72 27 chr15 57689603 57689714 -45805260 - MIRb SINE MIR -132 136 21 3 1025 615 27 0 0 chr15 57690191 57690264 -45804710 + (GA)n Simple_repeat Simple_repeat 2 74 0 3 1025 1100 210 0 5 chr15 57691232 57691428 -45803546 - B3 SINE B2 -14 202 8 3 1025 516 258 86 0 chr15 57691491 57691619 -45803355 - RSINE1 SINE B4 -23 142 4 3 1025 524 302 99 38 chr15 57691655 57692027 -45802947 + L1ME3A LINE L1 5598 5992 -181 3 1025 318 333 14 102 chr15 57692249 57692317 -45802657 + MLT1J2 LTR MaLR 280 342 -106 3 1025 333 0 0 0 chr15 57692317 57692354 -45802620 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1025 318 333 14 102 chr15 57692354 57692432 -45802542 + MLT1J2 LTR MaLR 343 413 -35 3 1025 572 231 212 6 chr15 57693129 57693299 -45801675 - B4A SINE B4 -86 206 2 3 1025 700 278 127 43 chr15 57693649 57694037 -45800937 - MLT1C LTR MaLR 0 467 42 3 1025 274 303 0 15 chr15 57695762 57695829 -45799145 + BC1_Mm scRNA scRNA 10 75 -77 3 1025 746 283 41 16 chr15 57695770 57695964 -45799010 + ID_B1 SINE B4 18 216 -8 3 1025 738 287 24 49 chr15 57696881 57697086 -45797888 - B4A SINE B4 -6 286 87 3 1025 311 265 118 33 chr15 57697482 57697634 -45797340 + Lx8 LINE L1 6130 6294 -1179 3 1025 2868 158 54 6 chr15 57697634 57698136 -45796838 + RLTR12B LTR ERVK 3 528 0 3 1025 727 296 63 67 chr15 57698215 57698722 -45796252 - RLTR11B LTR ERVK -17 510 1 3 1025 1903 259 68 10 chr15 57698722 57699210 -45795764 + Lx8 LINE L1 6287 6802 -671 3 1025 197 33 33 0 chr15 57699358 57699388 -45795586 + (TGG)n Simple_repeat Simple_repeat 2 32 0 4 1025 1046 54 0 0 chr15 57699388 57699518 -45795456 + B1_Mm SINE Alu 18 147 0 4 1025 194 125 21 0 chr15 57699518 57699566 -45795408 + (CAAA)n Simple_repeat Simple_repeat 4 52 0 4 1025 474 332 84 0 chr15 57699606 57699844 -45795130 + Lx8 LINE L1 7054 7311 -162 3 1025 249 361 20 10 chr15 57700880 57700978 -45793996 + PB1D10 SINE Alu 1 99 -18 4 1025 247 229 16 0 chr15 57700978 57701008 -45793966 + polypyrimidine Low_complexity Low_complexity 32 62 0 4 1025 225 108 0 0 chr15 57701008 57701045 -45793929 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 1025 247 229 16 0 chr15 57701045 57701075 -45793899 + polypyrimidine Low_complexity Low_complexity 2 31 0 4 1025 188 238 136 82 chr15 57704168 57704278 -45790696 - L3 LINE CR1 -3492 997 882 4 1025 310 275 13 12 chr15 57704411 57704497 -45790477 - ID4_ SINE ID -60 92 7 4 1025 440 222 136 8 chr15 57704508 57704626 -45790348 - B1F2 SINE Alu -5 144 12 4 1025 413 250 35 9 chr15 57704966 57705079 -45789895 + PB1D10 SINE Alu 2 117 0 4 1025 475 211 16 58 chr15 57706516 57706637 -45788337 + PB1D10 SINE Alu 1 116 -1 4 1025 479 172 183 0 chr15 57708082 57708175 -45786799 - PB1D9 SINE Alu 0 120 11 4 1025 648 286 33 33 chr15 57708232 57708413 -45786561 - B3A SINE B2 -13 185 5 4 1025 603 0 0 0 chr15 57709741 57709808 -45785166 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 1025 198 0 0 0 chr15 57710975 57710997 -45783977 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1025 227 254 28 14 chr15 57711815 57711887 -45783087 + L1M5 LINE L1 5688 5760 -413 4 1025 641 279 68 45 chr15 57711900 57712237 -45782737 + L1MB8 LINE L1 5810 6154 -24 4 1025 788 310 55 35 chr15 57712240 57712551 -45782423 - MER2 DNA MER2_type -3 342 26 4 1025 393 253 228 20 chr15 57713055 57713301 -45781673 + L1MB7 LINE L1 5869 6167 -17 4 1025 564 239 0 51 chr15 57713648 57713785 -45781189 - RSINE1 SINE B4 0 165 36 4 1025 552 249 101 52 chr15 57714196 57714463 -45780511 - B4A SINE B4 -12 280 1 4 1025 586 142 48 89 chr15 57714675 57714799 -45780175 + PB1D9 SINE Alu 2 120 0 4 1025 364 248 60 34 chr15 57715639 57715756 -45779218 - B1F SINE Alu -8 141 22 4 1025 746 207 43 0 chr15 57715791 57715931 -45779043 - B1_Mm SINE Alu 0 147 2 4 1025 311 259 11 76 chr15 57715849 57715941 -45779033 - MT2B LTR ERVL -361 240 155 4 1025 281 162 58 81 chr15 57715951 57716038 -45778936 - B1_Mus2 SINE Alu -61 86 2 4 1025 213 288 26 40 chr15 57715982 57716058 -45778916 - B4 SINE B4 -149 143 69 4 1025 297 349 33 26 chr15 57716212 57716223 -45778751 - L1MC LINE L1 -2223 5659 5651 4 1025 240 86 0 0 chr15 57716223 57716258 -45778716 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1025 297 349 33 26 chr15 57716258 57716399 -45778575 - L1MC LINE L1 -2232 5650 5506 4 1025 359 222 24 47 chr15 57717759 57717844 -45777130 - ID SINE ID -140 84 2 4 1025 29 0 0 0 chr15 57718646 57718675 -45776299 + AT_rich Low_complexity Low_complexity 1 29 0 4 1025 426 318 0 16 chr15 57718858 57718986 -45775988 + B4 SINE B4 160 285 -7 4 1025 732 243 42 27 chr15 57719326 57719553 -45775421 - ID_B1 SINE B4 -44 248 2 4 1025 261 368 14 94 chr15 57719567 57719705 -45775269 - PB1D7 SINE Alu -20 129 3 4 1025 232 283 53 21 chr15 57720059 57720153 -45774821 - MIR SINE MIR -104 158 62 4 1025 181 274 247 0 chr15 57721938 57722011 -45772963 + L2b LINE L2 3268 3358 -17 4 1025 278 296 142 40 chr15 57722112 57722288 -45772686 - L2b LINE L2 -201 3225 3029 4 1025 198 280 47 71 chr15 57722855 57722982 -45771992 - L2b LINE L2 -1162 2257 2134 4 1025 347 318 102 56 chr15 57724748 57725121 -45769853 - LTR65 LTR ERV1 -37 632 243 4 1025 216 250 163 20 chr15 57725360 57725458 -45769516 + PB1D10 SINE Alu 6 117 0 4 1025 501 127 0 0 chr15 57725461 57725540 -45769434 + (GAA)n Simple_repeat Simple_repeat 2 80 0 4 1025 962 228 19 19 chr15 57725541 57725747 -45769227 + B3 SINE B2 1 206 -10 4 1025 841 196 0 14 chr15 57725761 57725906 -45769068 - B1_Mur3 SINE Alu -6 143 1 4 1025 28 0 0 0 chr15 57725908 57725936 -45769038 + AT_rich Low_complexity Low_complexity 1 28 0 4 1025 1212 61 0 0 chr15 57726514 57726661 -45768313 + B1_Mus2 SINE Alu 1 147 0 4 1025 409 330 18 0 chr15 57726983 57727095 -45767879 + PB1D7 SINE Alu 1 114 -6 4 1025 389 250 39 70 chr15 57727104 57727233 -45767741 + RSINE1 SINE B4 41 165 0 4 1025 423 279 19 0 chr15 57727483 57727587 -45767387 + PB1D10 SINE Alu 1 106 -11 4 1025 532 278 45 0 chr15 57727611 57727744 -45767230 + B1_Mur1 SINE Alu 5 143 -6 4 1025 201 39 0 0 chr15 57727749 57727775 -45767199 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1025 318 67 0 0 chr15 57728506 57728551 -45766423 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1025 440 219 30 3 chr15 57728572 57728907 -45766067 + (TG)n Simple_repeat Simple_repeat 1 344 0 4 1025 207 294 133 8 chr15 57729141 57729261 -45765713 - MIR SINE MIR -4 258 124 4 1025 809 186 0 0 chr15 57729262 57729402 -45765572 + B1_Mus1 SINE Alu 1 140 -8 4 1025 221 58 18 55 chr15 57729402 57729457 -45765517 + (TAA)n Simple_repeat Simple_repeat 2 54 0 4 1025 260 336 30 67 chr15 57729478 57729612 -45765362 + B1F SINE Alu 6 134 -15 4 1025 3062 101 5 0 chr15 57730202 57730607 -45764367 + MTB_Mm LTR MaLR 1 407 0 4 1025 291 332 89 32 chr15 57730881 57731161 -45763813 + L1MC4a LINE L1 5686 5981 -1901 4 1025 1126 259 23 19 chr15 57731163 57731470 -45763504 + Lx8 LINE L1 6476 6783 -690 4 1025 356 198 27 0 chr15 57731470 57731556 -45763418 + B1_Mur2 SINE Alu 61 149 0 4 1025 2403 92 82 26 chr15 57731566 57731955 -45763019 + IAPLTR2a LTR ERVK 1 411 0 4 1025 4249 87 13 32 chr15 57731956 57732792 -45762182 + IAPEz-int LTR ERVK 9 662 -5819 4 1025 2194 69 7 0 chr15 57732792 57733068 -45761906 + IAPEz-int LTR ERVK 1359 1636 -4845 4 1025 6282 39 4 12 chr15 57733067 57733817 -45761157 + IAPEz-int LTR ERVK 5736 6479 -2 4 1025 2450 92 76 35 chr15 57733819 57734214 -45760760 + IAPLTR2a LTR ERVK 1 411 0 4 1025 215 170 21 0 chr15 57734214 57734261 -45760713 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 1025 1815 149 103 107 chr15 57735069 57735399 -45759575 - RLTR23 LTR ERV1 -2 428 101 4 1025 278 26 0 25 chr15 57735399 57735439 -45759535 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 1025 1815 149 103 107 chr15 57735439 57735537 -45759437 - RLTR23 LTR ERV1 -330 100 2 4 1025 368 234 37 18 chr15 57735659 57735768 -45759206 + PB1D7 SINE Alu 5 115 -5 4 1025 601 313 115 42 chr15 57735829 57736116 -45758858 + MLT1H2 LTR MaLR 179 486 -3 4 1025 472 248 7 93 chr15 57736356 57736507 -45758467 + MER63B DNA AcHobo 286 423 -13 4 1025 344 250 22 11 chr15 57736584 57736673 -45758301 - MIR SINE MIR -87 175 86 4 1025 424 269 10 0 chr15 57737190 57737294 -45757680 + B4 SINE B4 21 125 -167 4 1025 631 203 64 14 chr15 57737881 57738009 -45756965 + B1_Mus2 SINE Alu 1 137 -10 4 1025 207 0 0 0 chr15 57738009 57738032 -45756942 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1025 631 203 64 14 chr15 57738032 57738043 -45756931 + B1_Mus2 SINE Alu 138 147 0 4 1025 1983 156 42 27 chr15 57738647 57739049 -45755925 - RMER17C LTR ERVK -2 408 1 4 1025 375 298 112 79 chr15 57739120 57739397 -45755577 - B4 SINE B4 -2 290 5 4 1025 232 324 0 67 chr15 57739718 57739837 -45755137 - B1F SINE Alu -37 112 2 4 1025 658 246 78 28 chr15 57739837 57739910 -45755064 - B4 SINE B4 -210 82 1 4 1025 831 289 117 21 chr15 57739911 57740345 -45754629 + L1ME1 LINE L1 5078 5543 -636 4 1025 279 0 0 0 chr15 57740345 57740376 -45754598 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1025 225 0 0 0 chr15 57740376 57740400 -45754574 + (CG)n Simple_repeat Simple_repeat 1 25 0 4 1025 831 277 162 19 chr15 57740400 57740665 -45754309 + L1ME1 LINE L1 5544 5858 -321 4 1025 1359 62 78 0 chr15 57740708 57740868 -45754106 + B2_Mm1a SINE B2 1 160 -33 4 1025 207 0 0 0 chr15 57740868 57740891 -45754083 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 4 1025 1359 62 78 0 chr15 57740891 57740909 -45754065 + B2_Mm1a SINE B2 161 191 -2 4 1025 1054 110 0 0 chr15 57741192 57741338 -45753636 + B1_Mus1 SINE Alu 2 147 -1 4 1025 302 266 38 2 chr15 57741341 57741459 -45753515 + L1ME1 LINE L1 6194 6285 -49 4 1025 355 324 0 0 chr15 57741512 57741617 -45753357 - PB1D10 SINE Alu 0 117 13 4 1025 194 208 125 0 chr15 57741713 57741761 -45753213 + MIR SINE MIR 111 164 -98 4 1025 189 0 0 0 chr15 57741847 57741868 -45753106 + (CAGA)n Simple_repeat Simple_repeat 2 22 0 4 1025 1298 86 11 6 chr15 57741925 57742101 -45752873 + B2_Mm1t SINE B2 3 179 -14 4 1025 931 151 7 7 chr15 57742807 57742954 -45752020 - B1_Mus1 SINE Alu 0 148 2 4 1025 1344 134 9 9 chr15 57744896 57745122 -45749852 + RMER6A LTR ERVK 519 744 -12 4 1025 762 188 0 0 chr15 57745125 57745285 -45749689 + (TG)n Simple_repeat Simple_repeat 2 161 0 4 1025 466 277 8 16 chr15 57745290 57745411 -45749563 - B4A SINE B4 0 292 173 4 1025 316 269 0 0 chr15 57745600 57745667 -45749307 - ID4 SINE ID -1 82 16 4 1025 683 291 6 11 chr15 57745771 57745945 -45749029 + B3 SINE B2 1 173 -43 4 1025 542 272 25 12 chr15 57746035 57746195 -45748779 + RSINE1 SINE B4 2 163 -2 4 1025 466 262 37 0 chr15 57746270 57746377 -45748597 - PB1D10 SINE Alu 0 117 7 4 1025 577 257 13 46 chr15 57746436 57746587 -45748387 - RSINE1 SINE B4 -17 148 3 4 1025 228 35 0 0 chr15 57747951 57747980 -45746994 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1025 683 249 0 35 chr15 57748025 57748196 -45746778 - RSINE1 SINE B4 0 165 1 4 1025 464 328 138 6 chr15 57748557 57748977 -45745997 + L1MC4a LINE L1 6485 7007 -875 4 1025 314 247 81 12 chr15 57749070 57749156 -45745818 - BC1_Mm scRNA scRNA -60 92 1 4 1025 403 237 286 26 chr15 57750193 57750427 -45744547 + MER33 DNA MER1_type 16 310 -14 4 1025 1073 83 7 7 chr15 57750644 57750790 -45744184 - B1_Mus2 SINE Alu 0 147 2 4 1025 525 198 9 9 chr15 57750798 57750910 -45744064 - RMER1C Other Other 0 1342 1231 4 1025 309 132 19 19 chr15 57751970 57752024 -45742950 + 7SK RNA RNA 3 56 -275 5 1025 234 274 135 12 chr15 57752537 57752680 -45742294 - MIR SINE MIR -63 199 47 5 1025 390 286 33 33 chr15 57753081 57753233 -45741741 + Lx9 LINE L1 7159 7310 -334 5 1025 252 86 0 0 chr15 57753843 57753878 -45741096 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1025 470 256 99 0 chr15 57753878 57753999 -45740975 - B1F1 SINE Alu -13 136 4 5 1025 530 286 14 21 chr15 57754045 57754188 -45740786 - B1F1 SINE Alu -6 143 2 5 1025 377 167 13 0 chr15 57755301 57755379 -45739595 + CT-rich Low_complexity Low_complexity 2 80 0 5 1025 243 271 109 8 chr15 57755702 57755821 -45739153 - Lx8 LINE L1 -5 7468 7338 5 1025 243 228 47 71 chr15 57755816 57755901 -45739073 + L1M2 LINE L1 4613 4695 -1448 5 1025 2466 142 304 9 chr15 57756164 57756697 -45738277 - RMER6C LTR ERVK 0 690 1 5 1025 536 286 0 0 chr15 57757667 57757786 -45737188 + RSINE1 SINE B4 43 161 -4 5 1025 583 227 49 14 chr15 57757856 57757999 -45736975 + B1F2 SINE Alu 1 148 -1 5 1025 21 57 0 0 chr15 57758143 57758178 -45736796 + AT_rich Low_complexity Low_complexity 1 35 0 5 1025 1175 95 83 0 chr15 57758297 57758465 -45736509 - B2_Mm1t SINE B2 -11 182 1 5 1025 603 181 0 0 chr15 57758673 57758789 -45736185 + (CCCA)n Simple_repeat Simple_repeat 3 118 0 5 1025 217 218 91 0 chr15 57758795 57758850 -45736124 - B1_Mur1 SINE Alu 0 149 90 5 1025 838 218 57 21 chr15 57758806 57758998 -45735976 - ID_B1 SINE B4 -11 213 15 5 1025 257 261 15 0 chr15 57759544 57759609 -45735365 + PB1 SINE Alu 1 66 -61 5 1025 849 186 19 25 chr15 57759659 57759819 -45735155 - RSINE1 SINE B4 -4 161 3 5 1025 184 347 0 40 chr15 57760093 57760192 -45734782 - MIRb SINE MIR -138 130 36 5 1025 271 200 36 48 chr15 57761147 57761231 -45733743 + MLT1A1 LTR MaLR 314 396 -12 5 1025 1221 14 0 0 chr15 57761879 57762022 -45732952 + (TCTA)n Simple_repeat Simple_repeat 4 146 0 5 1025 189 0 0 0 chr15 57762086 57762107 -45732867 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1025 875 121 42 21 chr15 57762404 57762548 -45732426 - B1_Mus1 SINE Alu 0 148 2 5 1025 4440 44 0 0 chr15 57763381 57763902 -45731072 - L1Md_T LINE L1 -135 6447 5927 5 1025 808 19 0 0 chr15 57763903 57764008 -45730966 + L1Md_T LINE L1 6477 6581 -1 5 1025 207 0 0 0 chr15 57764247 57764270 -45730704 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1025 1011 65 65 7 chr15 57764270 57764409 -45730565 - B1_Mus2 SINE Alu 0 147 1 5 1025 329 256 31 47 chr15 57764649 57764776 -45730198 - L1MC5 LINE L1 -215 7746 7622 5 1025 210 355 160 17 chr15 57764987 57765162 -45729812 + B4 SINE B4 90 289 -3 5 1025 415 169 48 0 chr15 57765570 57765653 -45729321 - PB1D7 SINE Alu -1 119 33 5 1025 275 234 59 47 chr15 57765674 57765759 -45729215 - L1MC5 LINE L1 -936 7025 6940 5 1025 1275 111 11 0 chr15 57765851 57766041 -45728933 + B2_Mm1a SINE B2 1 192 -1 5 1025 210 91 0 0 chr15 57766181 57766214 -45728760 + (CGGGGG)n Simple_repeat Simple_repeat 2 34 0 5 1025 375 23 0 0 chr15 57766279 57766323 -45728651 + (TC)n Simple_repeat Simple_repeat 1 44 0 5 1025 696 242 30 0 chr15 57766843 57767002 -45727972 + B3 SINE B2 39 202 -14 5 1025 393 22 0 0 chr15 57767002 57767048 -45727926 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1025 857 186 14 0 chr15 57767140 57767285 -45727689 - B1_Mur4 SINE Alu -3 147 1 5 1025 28 29 0 0 chr15 57767285 57767320 -45727654 + AT_rich Low_complexity Low_complexity 1 35 0 5 1025 234 338 57 29 chr15 57768525 57768665 -45726309 - L1MC5 LINE L1 -2113 5769 5626 5 1025 24 53 0 0 chr15 57769315 57769353 -45725621 + AT_rich Low_complexity Low_complexity 1 38 0 5 1025 200 61 61 0 chr15 57769964 57769997 -45724977 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 5 1025 265 165 62 12 chr15 57770117 57770197 -45724777 + (TCTA)n Simple_repeat Simple_repeat 3 86 0 5 1025 877 153 209 12 chr15 57770915 57771087 -45723887 + B3 SINE B2 1 206 -10 5 1025 459 234 55 18 chr15 57772492 57772601 -45722373 + PB1D7 SINE Alu 8 120 0 5 1025 398 232 99 23 chr15 57772749 57772921 -45722053 + MER33 DNA MER1_type 78 262 -62 5 1025 23 54 0 0 chr15 57772989 57773026 -45721948 + AT_rich Low_complexity Low_complexity 1 37 0 5 1025 311 275 11 11 chr15 57773097 57773189 -45721785 - L1ME3A LINE L1 -72 6101 6010 5 1025 248 270 26 0 chr15 57773327 57773402 -45721572 - L1ME3A LINE L1 -632 5547 5469 5 1025 273 234 189 11 chr15 57773633 57773728 -45721246 - PB1D10 SINE Alu 0 117 6 5 1025 308 358 78 19 chr15 57774662 57774816 -45720158 - RMER30 DNA MER1_type -1 201 39 5 1025 232 159 63 0 chr15 57775363 57775426 -45719548 - B1_Mus2 SINE Alu 0 147 81 5 1025 295 206 108 36 chr15 57775450 57775561 -45719413 - PB1D9 SINE Alu 0 120 2 5 1025 675 297 40 22 chr15 57775952 57776224 -45718750 + B4 SINE B4 1 277 -15 5 1025 1227 97 0 0 chr15 57776237 57776413 -45718561 + (CA)n Simple_repeat Simple_repeat 2 177 0 5 1025 233 254 109 51 chr15 57776493 57776630 -45718344 - L1MC5 LINE L1 -884 7077 6933 5 1025 267 232 14 42 chr15 57776788 57776860 -45718114 - ID4 SINE ID -11 72 3 5 1025 259 278 155 0 chr15 57776967 57777064 -45717910 - B1F1 SINE Alu -37 112 1 5 1025 245 188 62 0 chr15 57777598 57777662 -45717312 - L1MC5 LINE L1 -2134 5748 5681 5 1025 1333 87 27 16 chr15 57778283 57778471 -45716503 - B2_Mm1t SINE B2 -3 190 1 5 1025 418 300 29 0 chr15 57778492 57778632 -45716342 - B1F SINE Alu -5 144 1 5 1025 577 235 147 7 chr15 57778668 57778818 -45716156 + B3 SINE B2 1 171 -45 5 1025 25 0 0 0 chr15 57778847 57778872 -45716102 + AT_rich Low_complexity Low_complexity 1 25 0 5 1025 1312 94 20 20 chr15 57778966 57779161 -45715813 - B2_Mm2 SINE B2 0 195 1 5 1025 216 67 0 0 chr15 57779241 57779271 -45715703 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 5 1025 534 312 45 7 chr15 57779277 57779432 -45715542 - RSINE1 SINE B4 0 165 5 5 1025 315 263 20 69 chr15 57779620 57779722 -45715252 - B3 SINE B2 -119 97 1 5 1025 1381 186 199 70 chr15 57779750 57780148 -45714826 - MT2A LTR ERVL 0 533 85 5 1025 798 169 0 29 chr15 57780246 57780386 -45714588 - B1_Mur1 SINE Alu -12 137 2 5 1025 222 319 118 0 chr15 57781164 57781283 -45713691 - MIRb SINE MIR -19 249 117 5 1025 481 317 110 59 chr15 57781535 57781790 -45713184 - MTEb LTR MaLR -11 368 101 5 1025 198 0 0 0 chr15 57781835 57781857 -45713117 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 1025 586 230 31 8 chr15 57781949 57782076 -45712898 + MTEa LTR MaLR 1 130 -249 5 1025 241 361 28 0 chr15 57782160 57782232 -45712742 + PB1 SINE Alu 1 74 -53 5 1025 26 0 0 0 chr15 57782742 57782768 -45712206 + AT_rich Low_complexity Low_complexity 1 26 0 5 1025 252 294 0 0 chr15 57782768 57782836 -45712138 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 1025 237 284 60 0 chr15 57782980 57783047 -45711927 + ID4 SINE ID 1 71 -12 5 1025 276 325 11 11 chr15 57783534 57783621 -45711353 - L2b LINE L2 -24 3351 3265 5 1025 440 284 0 63 chr15 57783792 57783935 -45711039 - B1F2 SINE Alu 0 149 16 5 1025 351 302 52 11 chr15 57783936 57784058 -45710916 + B1F1 SINE Alu 22 149 0 5 1025 496 304 56 5 chr15 57784617 57784812 -45710162 - B3 SINE B2 -11 205 1 5 1025 347 248 181 26 chr15 57785585 57785701 -45709273 + B1F SINE Alu 3 136 -13 5 1025 485 165 23 108 chr15 57785870 57785999 -45708975 + PB1D9 SINE Alu 2 119 -1 5 1025 978 223 10 20 chr15 57786022 57786223 -45708751 + B3 SINE B2 5 203 -13 5 1025 1262 54 0 0 chr15 57787602 57787750 -45707224 - B1_Mus1 SINE Alu 0 148 1 5 1025 242 279 16 0 chr15 57787925 57787986 -45706988 + MER58C DNA MER1_type 151 212 -3 5 1025 813 217 8 94 chr15 57790670 57790904 -45704070 + B3 SINE B2 2 215 -1 5 1025 24 0 0 0 chr15 57791024 57791048 -45703926 + AT_rich Low_complexity Low_complexity 1 24 0 5 1025 729 187 36 0 chr15 57791100 57791239 -45703735 + B3 SINE B2 70 213 -3 5 1025 629 227 20 94 chr15 57791293 57791528 -45703446 + B3A SINE B2 11 216 0 5 1025 469 239 132 18 chr15 57791760 57791926 -45703048 - L1MB7 LINE L1 -199 5985 5801 5 1025 234 306 99 0 chr15 57792171 57792292 -45702682 - L1M4 LINE L1 -6382 160 28 5 1025 198 302 122 57 chr15 57793473 57793596 -45701378 - MER5B DNA MER1_type -45 133 3 5 1025 303 286 0 0 chr15 57793874 57793944 -45701030 - ID4_ SINE ID -12 71 2 5 1025 189 254 152 0 chr15 57794713 57794772 -45700202 + MIRm SINE MIR 55 122 -154 5 1025 226 333 29 0 chr15 57795682 57795696 -45699278 + ID4_ SINE ID 2 71 -11 5 1025 240 315 19 0 chr15 57795696 57795750 -45699224 + tRNA-Gly-GGG tRNA tRNA 10 64 -10 5 1025 221 281 34 79 chr15 57795751 57795771 -45699203 + B4 SINE B4 2 86 -206 5 1025 524 300 19 6 chr15 57795997 57796158 -45698816 + RSINE1 SINE B4 3 165 0 5 1025 369 262 76 27 chr15 57796380 57796515 -45698459 + B1F SINE Alu 6 136 -11 5 1025 322 331 32 44 chr15 57796535 57796693 -45698281 + L1MB5 LINE L1 5839 5994 -180 5 1025 459 243 39 0 chr15 57796786 57796889 -45698085 + PB1D10 SINE Alu 2 108 -9 5 1025 327 317 38 9 chr15 57796956 57797061 -45697913 + RSINE1 SINE B4 2 109 -56 5 1025 487 289 132 20 chr15 57797973 57798224 -45696750 + B4A SINE B4 2 280 -12 5 1025 242 340 32 0 chr15 57798960 57799054 -45695920 - RSINE1 SINE B4 -68 97 1 5 1025 221 312 0 0 chr15 57800092 57800201 -45694773 + (ATG)n Simple_repeat Simple_repeat 2 110 0 6 1025 531 195 0 0 chr15 57800244 57800357 -45694617 + (TA)n Simple_repeat Simple_repeat 1 113 0 6 1025 201 39 0 0 chr15 57800744 57800770 -45694204 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1025 247 241 123 53 chr15 57801725 57801839 -45693135 + RSINE1 SINE B4 11 132 -33 6 1025 191 309 109 0 chr15 57802062 57802117 -45692857 + MIRb SINE MIR 179 239 -29 6 1025 1229 88 74 42 chr15 57802414 57802603 -45692371 + B2_Mm2 SINE B2 1 195 0 6 128 811 246 50 5 chr15 57802693 57802893 -45692081 - B3 SINE B2 -6 210 2 6 1026 853 252 47 59 chr15 57803120 57803458 -45691516 - RLTR15 LTR ERVK -25 334 1 6 1026 364 269 0 0 chr15 57803601 57803679 -45691295 - B4 SINE B4 0 292 215 6 1026 198 0 0 0 chr15 57803679 57803701 -45691273 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1026 1211 62 0 0 chr15 57803701 57803847 -45691127 - B1_Mus1 SINE Alu 0 148 3 6 1026 322 224 116 11 chr15 57803875 57803966 -45691008 - B4 SINE B4 -62 103 1 6 1026 304 295 187 0 chr15 57804172 57804338 -45690636 - LTR41B LTR ERVL 0 758 562 6 1026 249 196 0 0 chr15 57804615 57804666 -45690308 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1026 657 259 116 10 chr15 57804908 57805115 -45689859 + RCHARR1 DNA MER1_type 3 231 -743 6 1026 1695 201 49 118 chr15 57805218 57805686 -45689288 + RCHARR1 DNA MER1_type 244 679 -295 6 1026 524 250 73 0 chr15 57805707 57805831 -45689143 - ID_B1 SINE B4 -6 218 86 6 1026 460 228 82 66 chr15 57806000 57806183 -45688791 + RCHARR1 DNA MER1_type 788 973 -1 6 1026 1011 78 0 48 chr15 57806527 57806674 -45688300 + B1_Mur3 SINE Alu 10 149 0 6 1026 338 308 17 0 chr15 57806776 57806896 -45688078 + MERVL_2A-int LTR ERVL 1867 1988 -3773 6 1026 658 27 0 0 chr15 57807536 57807610 -45687364 - tRNA-Met_ tRNA tRNA -2 74 1 6 1026 238 224 0 0 chr15 57807892 57807941 -45687033 - L2b LINE L2 -17 3358 3310 6 1026 1146 221 163 6 chr15 57808203 57808535 -45686439 + ORR1C2 LTR MaLR 1 384 0 6 1026 193 367 55 0 chr15 57808795 57808923 -45686051 + L2c LINE L2 3018 3152 -235 6 1026 696 151 358 13 chr15 57809185 57809414 -45685560 + RMER15 LTR ERVL 33 340 -235 6 1026 786 152 0 48 chr15 57809404 57809549 -45685425 - ORR1B1 LTR MaLR -256 138 1 6 1026 365 150 83 0 chr15 57809549 57809609 -45685365 - MT2A LTR ERVL -468 65 1 6 1026 427 269 133 51 chr15 57809631 57809827 -45685147 + MLT1B LTR MaLR 135 346 -44 6 1026 21 0 0 0 chr15 57811146 57811167 -45683807 + AT_rich Low_complexity Low_complexity 1 21 0 6 1026 1622 209 46 28 chr15 57811177 57811567 -45683407 - Lx5 LINE L1 0 7050 6654 6 1026 306 0 0 0 chr15 57811582 57811616 -45683358 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1026 415 233 0 55 chr15 57811628 57811719 -45683255 - RSINE1 SINE B4 -73 92 7 6 1026 323 107 36 0 chr15 57811732 57811788 -45683186 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 6 1026 243 0 0 0 chr15 57812039 57812066 -45682908 + (TTG)n Simple_repeat Simple_repeat 3 29 0 6 1026 405 272 140 20 chr15 57812777 57812927 -45682047 + MER45B DNA Tip100 863 1030 -10 6 1026 1011 242 39 42 chr15 57812981 57813266 -45681708 + B4A SINE B4 6 289 -3 6 1026 871 267 128 25 chr15 57813278 57813709 -45681265 + L1MC3 LINE L1 5509 5983 -1802 6 1026 192 340 40 50 chr15 57814500 57814599 -45680375 - L2b LINE L2 -9 3366 3269 6 1026 492 254 7 78 chr15 57814658 57814799 -45680175 + B1F SINE Alu 1 131 -18 6 1026 396 0 0 0 chr15 57814835 57814879 -45680095 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1026 215 213 219 21 chr15 57814905 57815001 -45679973 + MIR SINE MIR 18 132 -76 6 1026 271 250 0 0 chr15 57815122 57815182 -45679792 + MER117 DNA MER1_type 101 160 -37 6 1026 365 231 131 29 chr15 57815535 57815659 -45679315 + MIR SINE MIR 10 130 -78 6 1026 355 159 48 0 chr15 57818913 57818976 -45675998 + tRNA-Ala-GCY_ tRNA tRNA 1 66 -9 6 1026 369 0 0 0 chr15 57819002 57819043 -45675931 + (TC)n Simple_repeat Simple_repeat 2 42 0 6 1026 555 53 0 0 chr15 57819043 57819117 -45675857 + (TG)n Simple_repeat Simple_repeat 2 76 0 6 1026 342 261 219 89 chr15 57819653 57819901 -45675073 + MER102a DNA MER1_type 29 321 -9 6 1026 204 97 0 0 chr15 57819954 57819985 -45674989 + (CAGAGA)n Simple_repeat Simple_repeat 6 36 0 6 1026 504 131 0 76 chr15 57820018 57820175 -45674799 + (CAGAGA)n Simple_repeat Simple_repeat 4 148 0 6 1026 351 269 39 0 chr15 57820639 57820743 -45674231 - L2c LINE L2 -248 3139 3032 6 1026 628 275 14 0 chr15 57821032 57821170 -45673804 - ID_B1 SINE B4 -75 149 10 6 1026 300 309 158 42 chr15 57821317 57821577 -45673397 + Charlie1b DNA MER1_type 196 485 -38 6 1026 840 94 0 0 chr15 57821594 57821722 -45673252 + (TG)n Simple_repeat Simple_repeat 2 129 0 6 1026 392 255 54 45 chr15 57822429 57822540 -45672434 + PB1D10 SINE Alu 5 116 -1 6 1026 339 307 0 10 chr15 57822648 57822750 -45672224 - ORR1E LTR MaLR -258 101 1 6 1026 760 350 81 21 chr15 57823133 57823568 -45671406 - MLT1K LTR MaLR -112 483 23 6 1026 430 257 156 0 chr15 57823756 57823865 -45671109 + RSINE1 SINE B4 2 127 -38 6 1026 378 0 0 0 chr15 57823892 57823934 -45671040 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1026 645 93 0 0 chr15 57823934 57824041 -45670933 + (GA)n Simple_repeat Simple_repeat 2 108 0 6 1026 550 165 221 8 chr15 57825074 57825196 -45669778 + B1_Mur2 SINE Alu 2 149 0 6 1026 855 304 87 0 chr15 57826376 57826711 -45668263 - MLT1A0 LTR MaLR 0 365 2 6 1026 681 278 112 4 chr15 57827211 57827453 -45667521 - B4A SINE B4 -18 274 7 6 1026 820 297 163 57 chr15 57827486 57828224 -45666750 - L1MB8 LINE L1 -14 6164 5349 6 1026 603 264 47 13 chr15 57828497 57828648 -45666326 - MLT1A0 LTR MaLR -3 405 207 6 1026 290 339 0 0 chr15 57828863 57829086 -45665888 + (CAGT)n Simple_repeat Simple_repeat 1 223 0 6 1026 403 320 0 0 chr15 57828997 57829352 -45665622 + (TCTG)n Simple_repeat Simple_repeat 1 355 0 6 1026 326 331 0 0 chr15 57829318 57829490 -45665484 + (CAGT)n Simple_repeat Simple_repeat 4 175 0 6 1026 403 322 0 1 chr15 57829469 57830286 -45664688 + (TCTG)n Simple_repeat Simple_repeat 1 816 0 6 1026 1186 153 89 42 chr15 57830525 57830920 -45664054 - RMER10A LTR ERVL -1 441 2 6 1026 467 239 7 78 chr15 57831025 57831166 -45663808 - ORR1E LTR MaLR -8 371 241 6 1026 1386 245 49 0 chr15 57831232 57831559 -45663415 - MTE2b LTR MaLR -36 343 1 6 1026 585 306 28 41 chr15 57831559 57831755 -45663219 - ORR1E LTR MaLR -166 193 1 6 1026 477 260 15 59 chr15 57831755 57831890 -45663084 - MLT1A0 LTR MaLR -227 138 10 6 1026 580 199 251 6 chr15 57832129 57832296 -45662678 - B3 SINE B2 -6 210 3 6 1026 1089 156 134 10 chr15 57832506 57832707 -45662267 - URR1A DNA MER1_type 0 226 1 6 1026 1150 298 55 3 chr15 57832752 57833132 -45661842 - L1MB5 LINE L1 -15 6159 5760 6 1026 297 75 0 0 chr15 57834576 57834616 -45660358 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1026 1044 38 105 0 chr15 57834616 57834749 -45660225 - B1_Mus2 SINE Alu 0 147 1 6 1026 354 289 0 0 chr15 57835648 57835797 -45659177 + (CAGA)n Simple_repeat Simple_repeat 2 150 0 6 1026 483 273 32 13 chr15 57836195 57836351 -45658623 + RSINE1 SINE B4 3 161 -4 6 1026 560 214 8 49 chr15 57836418 57836541 -45658433 + PB1D7 SINE Alu 2 119 -1 6 1026 347 240 26 26 chr15 57837117 57837194 -45657780 - ID4 SINE ID 0 83 7 6 1026 349 238 133 38 chr15 57837205 57837310 -45657664 - PB1 SINE Alu -2 125 11 6 1026 247 282 11 23 chr15 57837235 57837322 -45657652 - ID_B1 SINE B4 -59 165 80 6 1026 280 252 104 38 chr15 57837366 57837551 -45657423 + L1M5 LINE L1 5566 5765 -475 6 1026 672 139 148 0 chr15 57837604 57837726 -45657248 + B1_Mus1 SINE Alu 1 140 -8 6 1026 209 186 0 0 chr15 57837727 57837770 -45657204 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 6 1026 23 43 0 21 chr15 57837842 57837877 -45657097 + AT_rich Low_complexity Low_complexity 1 35 0 6 1026 1373 88 11 6 chr15 57837877 57838059 -45656915 + B2_Mm2 SINE B2 2 184 -11 6 1026 23 43 0 21 chr15 57838059 57838071 -45656903 + AT_rich Low_complexity Low_complexity 1 12 0 6 1026 479 316 34 41 chr15 57838128 57838365 -45656609 + ORR1E LTR MaLR 1 232 -138 6 1026 613 217 38 50 chr15 57838536 57838696 -45656278 + RSINE1 SINE B4 4 161 -4 6 1026 459 35 0 0 chr15 57838974 57839031 -45655943 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 1026 1253 160 55 32 chr15 57839103 57839322 -45655652 + URR1B DNA MER1_type 2 225 0 6 1026 247 298 114 44 chr15 57839887 57839962 -45655012 - Tigger13a DNA MER2_type -63 708 634 6 1026 1062 72 43 0 chr15 57839962 57840101 -45654873 + B1_Mus1 SINE Alu 2 146 -2 6 1026 247 298 114 44 chr15 57840101 57840183 -45654791 - Tigger13a DNA MER2_type -138 633 540 6 1026 261 0 0 0 chr15 57840280 57840309 -45654665 + (ATTG)n Simple_repeat Simple_repeat 3 31 0 6 1026 471 219 27 45 chr15 57840313 57840423 -45654551 - PB1D10 SINE Alu -1 116 9 6 1026 269 245 9 138 chr15 57840328 57840437 -45654537 - MT2B2 LTR ERVL -329 255 161 6 1026 372 98 98 0 chr15 57840665 57840726 -45654248 - HAL1-3A_ME LINE L1 -824 2034 1968 6 1026 483 148 0 0 chr15 57840726 57840814 -45654160 + (TCTG)n Simple_repeat Simple_repeat 3 90 0 6 1026 208 262 115 0 chr15 57840903 57840964 -45654010 + MIRb SINE MIR 117 184 -84 6 1026 1463 63 26 10 chr15 57842069 57842261 -45652713 + B2_Mm2 SINE B2 1 195 0 6 1026 369 0 0 0 chr15 57842724 57842765 -45652209 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1026 414 0 0 0 chr15 57843094 57843140 -45651834 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 1026 571 287 0 14 chr15 57843140 57843278 -45651696 - RSINE1 SINE B4 -24 141 6 6 1026 4407 53 2 0 chr15 57843411 57843940 -45651034 + L1_Mus1 LINE L1 6038 6567 0 7 1026 822 142 20 34 chr15 57844160 57844306 -45650668 + B1_Mur4 SINE Alu 5 148 -2 7 1026 301 287 93 0 chr15 57844515 57844623 -45650351 + MLT1I LTR MaLR 292 409 -2 7 1026 3281 229 85 51 chr15 57845107 57845287 -45649687 - Lx8 LINE L1 -325 7148 6970 7 1026 594 41 0 0 chr15 57845287 57845360 -45649614 + (TG)n Simple_repeat Simple_repeat 2 74 0 7 1026 3281 229 85 51 chr15 57845360 57846037 -45648937 - Lx8 LINE L1 -504 6969 6264 7 1026 236 243 14 41 chr15 57847613 57847686 -45647288 - MLT1B LTR MaLR -15 359 289 7 1026 650 272 211 18 chr15 57847861 57848089 -45646885 + ORR1D2 LTR MaLR 97 368 -2 7 1026 549 0 0 0 chr15 57848130 57848191 -45646783 + (TC)n Simple_repeat Simple_repeat 1 61 0 7 1026 770 312 128 36 chr15 57848507 57848988 -45645986 + MLT2B4 LTR ERVL 3 520 0 7 1026 269 204 56 0 chr15 57849005 57849059 -45645915 - MLT1B LTR MaLR -292 98 42 7 1026 238 100 60 0 chr15 57849376 57849426 -45645548 + (TATAA)n Simple_repeat Simple_repeat 3 55 0 7 1026 466 280 67 8 chr15 57849426 57849545 -45645429 + B1F SINE Alu 24 149 0 7 1026 1077 62 0 0 chr15 57850934 57851064 -45643910 + B1_Mus1 SINE Alu 1 130 -18 7 1026 1008 195 19 108 chr15 57851348 57851419 -45643555 + MTEa LTR MaLR 140 197 -182 7 1026 435 119 0 0 chr15 57851419 57851486 -45643488 + (CA)n Simple_repeat Simple_repeat 2 68 0 7 1026 1008 195 19 108 chr15 57851486 57851673 -45643301 + MTEa LTR MaLR 198 375 -4 7 1026 227 153 243 27 chr15 57852890 57852964 -45642010 + LTR40b LTR ERVL 24 113 -406 7 1026 392 287 30 59 chr15 57853063 57853268 -45641706 + LTR40b LTR ERVL 265 476 -43 7 1026 319 319 65 74 chr15 57853401 57853660 -45641314 + ORR1E LTR MaLR 1 254 -116 7 1026 873 259 33 25 chr15 57855026 57855268 -45639706 - B4A SINE B4 -48 244 1 7 1026 662 242 7 1 chr15 57855452 57855593 -45639381 - B1_Mur1 SINE Alu 0 149 3 7 1026 452 298 68 34 chr15 57855687 57855892 -45639082 + B4 SINE B4 3 214 -78 7 1026 279 193 17 17 chr15 57856494 57856552 -45638422 + ID4_ SINE ID 14 71 -12 7 1026 676 163 0 35 chr15 57857599 57857771 -45637203 + CT-rich Low_complexity Low_complexity 1 166 0 7 1026 394 236 28 0 chr15 57858028 57858134 -45636840 + PB1D10 SINE Alu 1 109 -8 7 1026 2080 118 54 65 chr15 57858514 57858885 -45636089 + ORR1B2 LTR MaLR 1 367 0 7 1026 257 271 46 111 chr15 57859366 57859474 -45635500 + MT2B LTR ERVL 140 240 -361 7 1026 338 275 46 56 chr15 57859378 57859486 -45635488 + B4 SINE B4 80 186 -106 7 1026 545 209 0 11 chr15 57859394 57859505 -45635469 + B1_Mur2 SINE Alu 6 109 -11 7 1026 253 261 71 63 chr15 57859412 57859539 -45635435 - B1F1 SINE Alu -9 140 13 7 1026 320 285 32 112 chr15 57859612 57859781 -45635193 - Lx9 LINE L1 -1913 5731 5541 7 1026 824 122 40 67 chr15 57859781 57859803 -45635171 - B1_Mur3 SINE Alu 0 149 137 7 1026 198 0 0 0 chr15 57859803 57859825 -45635149 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 7 1026 824 122 40 67 chr15 57859825 57859951 -45635023 - B1_Mur3 SINE Alu -13 136 5 7 1026 266 333 34 85 chr15 57859951 57860017 -45634957 - Lx9 LINE L1 -306 5574 5503 7 1026 611 222 8 0 chr15 57861353 57861470 -45633504 + RSINE1 SINE B4 11 128 -37 7 1026 255 261 82 65 chr15 57861720 57861840 -45633134 - PB1D10 SINE Alu -3 146 17 7 1026 601 212 151 7 chr15 57862022 57862174 -45632800 + B3A SINE B2 9 182 -16 7 1026 229 184 41 0 chr15 57862667 57862716 -45632258 + GA-rich Low_complexity Low_complexity 3 53 0 7 1026 261 0 0 0 chr15 57862947 57862976 -45631998 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 1026 198 91 0 0 chr15 57862991 57863024 -45631950 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 7 1026 512 218 0 90 chr15 57863027 57863138 -45631836 - B1_Mur2 SINE Alu -48 101 1 7 1026 817 214 188 25 chr15 57863893 57864133 -45630841 - B4A SINE B4 -2 290 12 7 1026 24 0 0 0 chr15 57864158 57864182 -45630792 + AT_rich Low_complexity Low_complexity 1 24 0 7 1026 462 305 20 13 chr15 57864192 57864345 -45630629 - RSINE1 SINE B4 -7 158 5 7 1026 661 253 13 0 chr15 57864373 57864527 -45630447 + RSINE1 SINE B4 4 159 -6 7 1026 229 344 118 37 chr15 57866168 57866304 -45628670 - MIRc SINE MIR -62 206 60 7 1026 370 308 84 54 chr15 57867290 57867428 -45627546 - Charlie19a DNA Charlie 0 386 243 7 1026 1528 58 0 16 chr15 57867428 57867619 -45627355 - B2_Mm1a SINE B2 -5 188 1 7 1026 370 308 84 54 chr15 57867619 57867741 -45627233 - Charlie19a DNA Charlie -144 242 118 7 1026 2862 82 139 2 chr15 57867747 57868163 -45626811 + MT2C_Mm LTR ERVL 1 473 -2 7 1026 1238 48 0 0 chr15 57868259 57868406 -45626568 + B1_Mm SINE Alu 1 147 0 7 1026 206 118 0 0 chr15 57868406 57868440 -45626534 + (A)n Simple_repeat Simple_repeat 1 34 0 7 1026 1049 110 0 0 chr15 57868546 57868692 -45626282 + B1_Mus1 SINE Alu 3 148 0 7 1026 587 161 173 24 chr15 57868742 57868869 -45626105 - URR1A DNA MER1_type -3 223 78 7 1026 180 313 72 0 chr15 57869126 57869209 -45625765 + L2b LINE L2 3284 3372 -3 7 1026 203 373 68 0 chr15 57869673 57869791 -45625183 + L2c LINE L2 3262 3387 0 7 1026 679 304 117 65 chr15 57869972 57870313 -45624661 + ORR1E LTR MaLR 1 359 0 7 1026 493 275 0 153 chr15 57870486 57870649 -45624325 - RSINE1 SINE B4 -24 141 4 7 1026 732 213 25 10 chr15 57870868 57871038 -45623936 + B3A SINE B2 40 206 -10 7 1026 268 315 145 35 chr15 57871063 57871290 -45623684 + L1MB4 LINE L1 247 498 -6109 7 1026 1221 61 0 0 chr15 57871300 57871447 -45623527 + B1_Mm SINE Alu 1 147 0 7 1026 202 128 26 0 chr15 57871450 57871489 -45623485 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 7 1026 315 257 0 13 chr15 57871609 57871684 -45623290 + L1MB4 LINE L1 619 692 -5915 7 1026 47 19 0 0 chr15 57871791 57871845 -45623129 + AT_rich Low_complexity Low_complexity 1 54 0 7 1026 278 319 8 0 chr15 57871891 57872010 -45622964 + L1MB4 LINE L1 4846 4965 -1776 7 1026 381 322 0 0 chr15 57872015 57872102 -45622872 + B3A SINE B2 1 87 -111 7 1026 441 0 0 0 chr15 57872112 57872161 -45622813 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1026 600 288 60 15 chr15 57872167 57872435 -45622539 + L1MB4 LINE L1 5023 5302 -1439 7 1026 256 255 0 0 chr15 57872520 57872571 -45622403 - RSINE1 SINE B4 -113 52 2 7 1026 374 257 68 14 chr15 57872573 57872719 -45622255 + L1MB4 LINE L1 5282 5435 -1312 7 1026 1164 78 7 0 chr15 57872735 57872888 -45622086 + B2_Mm1t SINE B2 2 155 -38 7 1026 1114 98 0 0 chr15 57872946 57873089 -45621885 - B1_Mus2 SINE Alu 0 147 5 7 1026 344 125 29 22 chr15 57873328 57873430 -45621544 + B2_Mm2 SINE B2 47 185 -10 7 1026 897 163 7 0 chr15 57873443 57873584 -45621390 + B1_Mur4 SINE Alu 2 143 -7 7 1026 360 291 10 0 chr15 57873589 57873692 -45621282 + L1MB4 LINE L1 5453 5556 -1191 7 1026 323 200 31 0 chr15 57873692 57873757 -45621217 + L1MA4 LINE L1 4904 4970 -1173 7 1026 229 196 0 0 chr15 57873764 57873810 -45621164 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1026 449 294 44 44 chr15 57873838 57873998 -45620976 + RSINE1 SINE B4 2 161 -4 7 1026 215 167 42 0 chr15 57874066 57874114 -45620860 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 1026 394 263 109 53 chr15 57874119 57874201 -45620773 + L1_Rod LINE L1 4988 5076 -801 7 1026 865 184 0 7 chr15 57874201 57874349 -45620625 + B1_Mur3 SINE Alu 1 147 -2 7 1026 411 263 109 53 chr15 57874349 57874531 -45620443 + L1_Rod LINE L1 5047 5267 -610 7 1026 584 266 125 7 chr15 57874612 57874756 -45620218 + B3 SINE B2 14 174 -42 7 1026 620 190 50 0 chr15 57874786 57874907 -45620067 - B1_Mm SINE Alu -20 127 1 7 1026 718 279 88 88 chr15 57874980 57875105 -45619869 + L1MA4 LINE L1 5471 5591 -709 7 1026 464 300 6 75 chr15 57875105 57875278 -45619696 + RSINE1 SINE B4 5 165 0 7 1026 195 42 0 0 chr15 57875285 57875309 -45619665 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 1026 718 279 88 88 chr15 57875309 57875497 -45619477 + L1MA4 LINE L1 5596 5776 -524 7 1026 1637 22 0 11 chr15 57875497 57875684 -45619290 + B2_Mm1a SINE B2 2 186 -7 7 1026 718 279 88 88 chr15 57875684 57875884 -45619090 + L1MA4 LINE L1 5777 5993 -307 7 1026 527 246 17 9 chr15 57876095 57876210 -45618764 + RSINE1 SINE B4 2 117 -48 7 1026 844 86 254 21 chr15 57876262 57876404 -45618570 + B2_Mm2 SINE B2 3 177 -18 7 1026 607 165 139 0 chr15 57876429 57876544 -45618430 + B1_Mus2 SINE Alu 9 139 -8 7 1026 242 302 128 28 chr15 57876789 57876898 -45618076 + B1F SINE Alu 3 122 -27 7 1026 707 298 82 46 chr15 57876934 57877237 -45617737 + MER82 DNA MER2_type 109 422 -231 7 1026 648 306 22 0 chr15 57877258 57877438 -45617536 + MER82 DNA MER2_type 469 652 -1 7 1026 708 205 97 135 chr15 57877438 57877837 -45617137 + L1MB4 LINE L1 5218 5604 -576 7 1026 407 286 24 104 chr15 57877848 57877973 -45617001 + PB1D10 SINE Alu 3 117 0 7 1026 1798 234 78 20 chr15 57877973 57878510 -45616464 + L1MB4 LINE L1 5604 6171 -9 7 1026 1218 55 0 0 chr15 57880967 57881113 -45613861 + B1_Mus2 SINE Alu 2 147 0 7 1026 348 287 274 44 chr15 57881190 57881416 -45613558 - B4A SINE B4 -13 279 2 7 1026 333 243 14 0 chr15 57882357 57882427 -45612547 + ID4_ SINE ID 2 72 -11 7 1026 496 277 9 0 chr15 57882571 57882683 -45612291 - PB1D10 SINE Alu -3 114 2 7 1026 909 266 45 35 chr15 57883386 57883674 -45611300 + B4A SINE B4 2 292 0 7 1026 201 74 0 0 chr15 57883676 57883703 -45611271 + (CA)n Simple_repeat Simple_repeat 1 27 0 7 1026 280 270 0 0 chr15 57887391 57887454 -45607520 - tRNA-Phe-TTY tRNA tRNA -5 71 9 7 1026 222 118 0 0 chr15 57887648 57887682 -45607292 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 1026 261 0 0 0 chr15 57887696 57887725 -45607249 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 1026 1268 106 39 0 chr15 57887993 57888173 -45606801 - B2_Mm2 SINE B2 -8 187 1 7 1026 1256 74 0 0 chr15 57888632 57888780 -45606194 + B1_Mus1 SINE Alu 1 148 0 7 1026 22 0 0 0 chr15 57888780 57888802 -45606172 + AT_rich Low_complexity Low_complexity 1 22 0 7 1026 1446 73 6 11 chr15 57888815 57888996 -45605978 + B2_Mm2 SINE B2 2 181 -14 7 1026 1032 37 14 29 chr15 57889313 57889453 -45605521 + B1_Mm SINE Alu 10 147 0 7 1026 1439 52 0 0 chr15 57889479 57889653 -45605321 + L1_Mus2 LINE L1 6393 6566 0 7 1026 687 252 23 0 chr15 57890317 57890448 -45604526 - RSINE1 SINE B4 -29 136 3 7 1026 761 232 5 98 chr15 57890628 57890843 -45604131 + B3A SINE B2 4 198 0 7 1026 415 284 24 12 chr15 57890861 57890987 -45603987 + B1F1 SINE Alu 7 122 -27 8 1026 362 245 40 30 chr15 57891122 57891223 -45603751 + ORR1D1 LTR MaLR 62 163 -221 8 1026 501 159 81 36 chr15 57891223 57891334 -45603640 - Lx9 LINE L1 -658 6986 6871 8 1026 818 147 184 3 chr15 57891335 57891641 -45603333 + Lx9 LINE L1 7281 7642 -2 8 1026 843 207 19 120 chr15 57891648 57891906 -45603068 + ORR1D1 LTR MaLR 143 374 0 8 1026 1235 70 13 0 chr15 57891926 57892084 -45602890 + B2_Mm2 SINE B2 2 161 -34 8 1026 969 225 30 108 chr15 57892209 57892478 -45602496 + B4 SINE B4 42 289 -3 8 1026 339 25 0 0 chr15 57892478 57892518 -45602456 + (CAA)n Simple_repeat Simple_repeat 3 42 0 8 1026 209 351 66 44 chr15 57892744 57892881 -45602093 - L2b LINE L2 -6 3369 3230 8 1026 471 209 124 50 chr15 57893191 57893312 -45601662 + ID_B1 SINE B4 95 224 0 8 1026 395 241 54 36 chr15 57893361 57893473 -45601501 + B4 SINE B4 6 119 -173 8 1026 1320 27 0 0 chr15 57893831 57893977 -45600997 - B1_Mus2 SINE Alu -1 146 1 8 1026 1255 197 15 0 chr15 57893983 57894186 -45600788 - B3 SINE B2 -10 206 1 8 1026 346 202 17 161 chr15 57894556 57894674 -45600300 - PB1D10 SINE Alu 0 117 17 8 1026 662 243 141 11 chr15 57895627 57895818 -45599156 + ID_B1 SINE B4 1 216 -8 8 1026 768 172 142 53 chr15 57895830 57895989 -45598985 + B3 SINE B2 1 169 -47 8 1026 555 56 0 0 chr15 57895989 57896060 -45598914 + (CA)n Simple_repeat Simple_repeat 2 72 0 8 1026 768 172 142 53 chr15 57896060 57896090 -45598884 + B3 SINE B2 170 206 -10 8 1026 303 28 0 0 chr15 57896105 57896141 -45598833 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 1026 1288 54 0 0 chr15 57896573 57896721 -45598253 + B1_Mus1 SINE Alu 1 148 0 8 1026 317 43 13 80 chr15 57896724 57896799 -45598175 + (CAAAAA)n Simple_repeat Simple_repeat 2 71 0 8 1026 1035 219 24 0 chr15 57896831 57897036 -45597938 + B3 SINE B2 2 211 -5 8 1026 807 61 278 0 chr15 57898246 57898361 -45596613 + B1_Mus1 SINE Alu 2 148 0 8 1026 737 93 42 9 chr15 57898411 57898534 -45596440 + ORR1A2 LTR MaLR 129 272 -98 8 1026 29 28 0 0 chr15 57899035 57899071 -45595903 + AT_rich Low_complexity Low_complexity 1 36 0 8 1026 583 292 83 0 chr15 57899324 57899468 -45595506 - RSINE1 SINE B4 -7 158 3 8 1026 630 256 30 0 chr15 57899492 57899631 -45595343 - B1_Mur1 SINE Alu -7 142 1 8 1026 199 328 33 0 chr15 57899733 57899794 -45595180 + L2a LINE L2 3364 3426 0 8 1026 1466 45 0 58 chr15 57899813 57900001 -45594973 + B2_Mm2 SINE B2 3 179 -16 8 1026 874 218 0 0 chr15 57900036 57900183 -45594791 + B3A SINE B2 1 147 -51 8 1026 557 184 48 138 chr15 57900202 57900391 -45594583 - B3A SINE B2 0 198 27 8 1026 846 158 15 8 chr15 57900407 57900541 -45594433 - B1_Mur2 SINE Alu -9 140 6 8 1026 266 233 0 88 chr15 57900508 57900588 -45594386 - B3A SINE B2 -124 74 2 8 1026 375 23 0 0 chr15 57900663 57900707 -45594267 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 1026 304 310 14 14 chr15 57900709 57900781 -45594193 - B3A SINE B2 -32 166 95 8 1026 436 286 161 18 chr15 57901247 57901471 -45593503 - ORR1E LTR MaLR -18 341 86 8 1026 672 234 0 15 chr15 57901499 57901629 -45593345 + B1_Mur1 SINE Alu 8 135 -14 8 1026 859 158 265 6 chr15 57901801 57901967 -45593007 - B3 SINE B2 -6 210 2 8 1026 324 350 63 59 chr15 57902711 57902948 -45592026 + MIR SINE MIR 19 256 -6 8 1026 363 273 138 106 chr15 57903557 57903717 -45591257 - RSINE1 SINE B4 0 165 1 8 1026 568 287 48 32 chr15 57903871 57904058 -45590916 + ID_B1 SINE B4 21 210 -14 8 1026 189 0 0 0 chr15 57904058 57904079 -45590895 + (CAAAA)n Simple_repeat Simple_repeat 1 21 0 8 1026 370 277 0 60 chr15 57904098 57904198 -45590776 + PB1D10 SINE Alu 21 114 -3 8 1026 592 181 9 9 chr15 57904395 57904501 -45590473 - B1_Mus1 SINE Alu -42 106 1 8 1026 369 219 8 146 chr15 57904402 57904525 -45590449 - MT2B LTR ERVL -349 252 147 8 1026 956 198 25 40 chr15 57904529 57904729 -45590245 + B3 SINE B2 5 201 -15 8 1026 1038 138 78 28 chr15 57904768 57904947 -45590027 + B2_Mm2 SINE B2 1 188 -7 8 1026 1205 68 0 14 chr15 57905530 57905678 -45589296 - B1_Mus2 SINE Alu -1 146 1 8 1026 470 250 193 29 chr15 57905790 57905930 -45589044 + RSINE1 SINE B4 3 165 0 8 1026 301 284 11 33 chr15 57905959 57906050 -45588924 + ID_B1 SINE B4 79 167 -57 8 1026 434 278 28 0 chr15 57905970 57906078 -45588896 + PB1D7 SINE Alu 10 120 0 8 1026 202 221 67 93 chr15 57909371 57909446 -45585528 - L2c LINE L2 -1 3386 3314 8 1026 1071 272 76 3 chr15 57909452 57909766 -45585208 - MER2 DNA MER2_type -2 343 7 8 1026 216 0 0 0 chr15 57909890 57909914 -45585060 + (TC)n Simple_repeat Simple_repeat 2 25 0 8 1026 450 0 0 0 chr15 57910147 57910197 -45584777 + (GA)n Simple_repeat Simple_repeat 1 50 0 8 1026 432 0 0 0 chr15 57911234 57911282 -45583692 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 1026 726 205 8 0 chr15 57911285 57911412 -45583562 - B1_Mur2 SINE Alu -21 128 1 8 1026 1522 70 16 5 chr15 57911444 57911632 -45583342 + B2_Mm2 SINE B2 2 191 -4 8 1026 23 0 0 0 chr15 57911728 57911751 -45583223 + AT_rich Low_complexity Low_complexity 1 23 0 8 1026 686 192 44 82 chr15 57911866 57911927 -45583047 - B3 SINE B2 -63 153 101 8 1026 198 0 0 0 chr15 57911927 57911949 -45583025 + (CAGG)n Simple_repeat Simple_repeat 1 22 0 8 1026 753 68 1 2 chr15 57911949 57912046 -45582928 - B2_Mm2 SINE B2 -116 100 1 8 1026 569 217 118 25 chr15 57912046 57912207 -45582767 - Lx4B LINE L1 -704 6354 6179 8 1026 243 62 0 0 chr15 57912196 57912228 -45582746 + L1_Mur2 LINE L1 4649 4680 -1197 8 1026 1037 209 28 33 chr15 57912694 57912907 -45582067 + B3 SINE B2 1 212 -4 8 1026 184 377 151 7 chr15 57913197 57913336 -45581638 - MIRb SINE MIR -95 173 15 8 1026 232 181 90 77 chr15 57913515 57913593 -45581381 + B3A SINE B2 1 79 -119 8 1026 411 361 129 74 chr15 57913641 57914006 -45580968 - MLT1H LTR MaLR -102 447 63 8 1026 849 164 8 0 chr15 57914477 57914611 -45580363 + B1_Mus1 SINE Alu 1 135 -13 8 1026 180 0 0 0 chr15 57914611 57914631 -45580343 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 8 1026 708 273 129 26 chr15 57914667 57914900 -45580074 + B4A SINE B4 22 278 -14 8 1026 1245 139 82 50 chr15 57914928 57915147 -45579827 + URR1A DNA MER1_type 1 226 0 8 1026 331 171 58 126 chr15 57915503 57915590 -45579384 + MTEa LTR MaLR 299 379 0 8 1026 344 277 10 0 chr15 57915748 57915849 -45579125 - L1MC LINE L1 -1067 5079 4978 8 1026 989 160 0 7 chr15 57915881 57916026 -45578948 - B1_Mur4 SINE Alu -6 144 1 8 1026 1339 224 134 6 chr15 57916320 57916648 -45578326 + ORR1D2 LTR MaLR 1 370 0 8 1026 1158 224 197 80 chr15 57916927 57917339 -45577635 + MT2A LTR ERVL 5 464 -69 8 1026 1242 68 0 0 chr15 57917343 57917490 -45577484 + B1_Mus2 SINE Alu 1 147 0 8 1026 439 292 0 0 chr15 57917614 57917720 -45577254 - PB1D10 SINE Alu -11 106 1 8 1026 26 0 0 0 chr15 57917889 57917915 -45577059 + AT_rich Low_complexity Low_complexity 1 26 0 8 1026 192 143 0 0 chr15 57918807 57918819 -45576155 + (TTC)n Simple_repeat Simple_repeat 1 12 0 8 1026 1689 42 0 15 chr15 57918819 57919014 -45575960 - B2_Mm1a SINE B2 -1 192 1 8 1026 192 143 0 0 chr15 57919014 57919036 -45575938 + (TTC)n Simple_repeat Simple_repeat 3 24 0 8 1026 1012 162 193 11 chr15 57919981 57920162 -45574812 + B3 SINE B2 1 214 -2 8 1026 1256 62 0 0 chr15 57920170 57920316 -45574658 + B1_Mus2 SINE Alu 2 147 0 8 1026 804 203 0 0 chr15 57920364 57920497 -45574477 + B1_Mur4 SINE Alu 9 141 -9 8 1026 796 252 28 73 chr15 57920601 57920819 -45574155 + B3 SINE B2 2 209 -7 8 1026 234 318 127 37 chr15 57920824 57920958 -45574016 + MIRc SINE MIR 22 167 -101 8 1026 383 278 42 101 chr15 57921242 57921410 -45573564 + B4 SINE B4 66 223 -69 8 1026 827 135 7 28 chr15 57921270 57921415 -45573559 + B1_Mur4 SINE Alu 9 150 0 8 1026 1213 55 14 0 chr15 57921961 57922107 -45572867 + B1_Mus1 SINE Alu 1 148 0 8 1026 1308 191 5 0 chr15 57922125 57922335 -45572639 - B3 SINE B2 -5 211 1 8 1026 431 187 35 6 chr15 57922363 57922535 -45572439 + (TG)n Simple_repeat Simple_repeat 2 178 0 8 1026 617 232 0 46 chr15 57922595 57922726 -45572248 - RSINE1 SINE B4 0 165 41 8 1026 1654 62 0 0 chr15 57923082 57923275 -45571699 + B2_Mm1t SINE B2 1 193 0 8 1026 267 188 0 55 chr15 57923275 57923304 -45571670 + A-rich Low_complexity Low_complexity 1 26 0 8 1026 1199 62 7 14 chr15 57923304 57923452 -45571522 + B1_Mus1 SINE Alu 2 148 0 8 1026 267 188 0 55 chr15 57923452 57923495 -45571479 + A-rich Low_complexity Low_complexity 27 69 0 8 1026 855 239 46 0 chr15 57923653 57923850 -45571124 + B3 SINE B2 7 212 -4 8 1026 206 250 0 14 chr15 57923866 57923939 -45571035 + GA-rich Low_complexity Low_complexity 2 73 0 8 1026 292 246 86 60 chr15 57924088 57924205 -45570769 + B3A SINE B2 1 120 -75 8 1026 207 0 0 0 chr15 57924430 57924453 -45570521 + (CCCCCT)n Simple_repeat Simple_repeat 2 24 0 8 1026 795 94 0 0 chr15 57924482 57924588 -45570386 - B2_Mm2 SINE B2 -88 107 2 8 1026 220 271 0 0 chr15 57925413 57925461 -45569513 + (CA)n Simple_repeat Simple_repeat 1 48 0 9 1026 280 310 33 74 chr15 57925461 57925583 -45569391 + RSINE1 SINE B4 43 159 -6 9 1026 559 204 62 0 chr15 57925709 57925822 -45569152 - ID_B1 SINE B4 -1 223 104 9 1026 433 261 99 8 chr15 57925822 57925840 -45569134 - B1F2 SINE Alu -1 148 6 9 1026 1250 41 7 0 chr15 57926232 57926378 -45568596 + B1_Mus2 SINE Alu 1 147 0 9 1026 1266 48 0 0 chr15 57927406 57927551 -45567423 - B1_Mus1 SINE Alu 0 148 4 9 1026 502 256 74 15 chr15 57927743 57927878 -45567096 - ID_B1 SINE B4 0 224 82 9 1026 707 203 26 83 chr15 57927947 57928103 -45566871 + B1_Mur2 SINE Alu 1 147 -2 9 1026 29 47 0 0 chr15 57928492 57928535 -45566439 + AT_rich Low_complexity Low_complexity 1 43 0 9 1026 248 216 39 0 chr15 57928569 57928620 -45566354 - B3 SINE B2 -46 170 118 9 1026 456 215 47 54 chr15 57929007 57929137 -45565837 + PB1D9 SINE Alu 13 150 0 9 1026 597 148 35 44 chr15 57929774 57929887 -45565087 - B1_Mus2 SINE Alu -6 141 30 9 1026 248 311 71 39 chr15 57929808 57929962 -45565012 - MT2B LTR ERVL -337 264 106 9 1026 262 360 16 16 chr15 57930585 57930712 -45564262 - MIR SINE MIR -34 228 102 9 1026 1316 48 0 0 chr15 57930941 57931088 -45563886 + B1_Mm SINE Alu 1 147 0 9 1026 473 197 34 1 chr15 57931832 57931930 -45563044 + PB1D9 SINE Alu 8 108 -12 9 1026 201 121 0 0 chr15 57931930 57931963 -45563011 + (CAAT)n Simple_repeat Simple_repeat 1 33 0 9 1026 1281 189 198 55 chr15 57931993 57932397 -45562577 - RMER6A LTR ERVK -294 462 1 9 1026 2313 153 117 25 chr15 57932428 57932871 -45562103 + Lx4A LINE L1 6574 7057 -1 9 1026 412 191 54 181 chr15 57932890 57933056 -45561918 + B3 SINE B2 48 192 -3 9 1026 1309 117 37 0 chr15 57933061 57933249 -45561725 + B2_Mm2 SINE B2 1 195 0 9 1026 580 204 97 21 chr15 57933275 57933420 -45561554 - RMER10B LTR ERVL -51 347 192 9 1026 516 178 236 36 chr15 57933482 57933622 -45561352 + URR1A DNA MER1_type 59 226 0 9 1026 201 311 86 32 chr15 57933693 57933786 -45561188 + MIRm SINE MIR 51 148 -120 9 1027 301 238 58 8 chr15 57934359 57934463 -45560511 + B1F SINE Alu 13 149 0 9 1027 222 280 60 0 chr15 57935095 57935145 -45559829 + RSINE1 SINE B4 11 63 -102 9 1027 631 139 115 57 chr15 57935216 57935338 -45559636 + B1_Mur4 SINE Alu 22 150 0 9 1027 576 288 69 5 chr15 57935611 57935791 -45559183 + B3A SINE B2 2 191 -4 9 1027 861 279 15 0 chr15 57936245 57936449 -45558525 + B3 SINE B2 1 207 -9 9 1027 1025 84 30 0 chr15 57936693 57936824 -45558150 + B1_Mus1 SINE Alu 2 136 -12 9 1027 25 0 0 0 chr15 57937225 57937250 -45557724 + AT_rich Low_complexity Low_complexity 1 25 0 9 1027 25 0 0 0 chr15 57937455 57937480 -45557494 + AT_rich Low_complexity Low_complexity 1 25 0 9 1027 547 102 0 10 chr15 57937738 57937833 -45557141 - B1_Mus2 SINE Alu -10 137 48 9 1027 1413 84 16 10 chr15 57937867 57938059 -45556915 + B2_Mm2 SINE B2 1 193 -2 9 1027 280 200 77 0 chr15 57938103 57938168 -45556806 + B1_Mur3 SINE Alu 48 117 -32 9 1027 877 199 14 7 chr15 57938666 57938813 -45556161 - B1_Mur2 SINE Alu 0 149 2 9 1027 21 0 0 0 chr15 57938834 57938855 -45556119 + AT_rich Low_complexity Low_complexity 1 21 0 9 1027 732 211 164 11 chr15 57938864 57939041 -45555933 - B3 SINE B2 -12 204 1 9 1027 688 289 71 91 chr15 57939071 57939271 -45555703 - B4 SINE B4 0 292 97 9 1027 1253 55 7 0 chr15 57939271 57939417 -45555557 - B1_Mus2 SINE Alu 0 147 1 9 1027 688 289 71 91 chr15 57939417 57939513 -45555461 - B4 SINE B4 -196 96 2 9 1027 667 218 14 83 chr15 57940388 57940533 -45554441 - B1_Mus2 SINE Alu 0 147 13 9 1027 208 250 228 18 chr15 57940534 57940648 -45554326 + MIRb SINE MIR 43 180 -88 9 1027 771 296 21 11 chr15 57940717 57940905 -45554069 - B3A SINE B2 -7 191 2 9 1027 421 300 74 37 chr15 57940928 57941063 -45553911 - B1F1 SINE Alu -7 142 3 9 1027 572 236 8 47 chr15 57941282 57941411 -45553563 - RSINE1 SINE B4 -38 127 4 9 1027 531 309 25 46 chr15 57941948 57942145 -45552829 - B3A SINE B2 -3 195 3 9 1027 386 318 78 0 chr15 57942454 57942583 -45552391 + RSINE1 SINE B4 12 150 -15 9 1027 21 0 0 0 chr15 57942631 57942652 -45552322 + AT_rich Low_complexity Low_complexity 1 21 0 9 1027 467 326 70 11 chr15 57942985 57943171 -45551803 + B4A SINE B4 10 206 -86 9 1027 471 342 57 32 chr15 57943179 57943460 -45551514 + B4A SINE B4 1 288 -4 9 1027 218 270 103 51 chr15 57943620 57943698 -45551276 + ID4_ SINE ID 2 83 0 9 1027 243 0 0 0 chr15 57943692 57943719 -45551255 + (A)n Simple_repeat Simple_repeat 1 27 0 9 1027 818 164 0 0 chr15 57944029 57944163 -45550811 + B1_Mur3 SINE Alu 1 134 -15 9 1027 805 143 0 36 chr15 57944847 57944985 -45549989 - B1_Mus1 SINE Alu -13 135 3 9 1027 32 43 0 0 chr15 57945182 57945228 -45549746 + AT_rich Low_complexity Low_complexity 1 46 0 9 1027 21 36 0 0 chr15 57945255 57945283 -45549691 + AT_rich Low_complexity Low_complexity 1 28 0 9 1027 947 271 201 8 chr15 57945317 57945670 -45549304 - Lx6 LINE L1 -26 7434 7014 9 1027 31 0 0 0 chr15 57945896 57945927 -45549047 + AT_rich Low_complexity Low_complexity 1 31 0 9 1027 26 30 0 0 chr15 57946068 57946101 -45548873 + AT_rich Low_complexity Low_complexity 1 33 0 9 1027 1239 54 0 0 chr15 57946338 57946486 -45548488 - B1_Mus1 SINE Alu 0 148 1 9 1027 574 220 106 0 chr15 57946528 57946660 -45548314 + B1_Mm SINE Alu 2 147 0 9 1027 621 257 0 7 chr15 57946913 57947050 -45547924 + MTE-int LTR MaLR 981 1116 -464 9 1027 585 177 35 0 chr15 57947051 57947164 -45547810 + ORR1D2 LTR MaLR 192 308 -62 9 1027 30 27 0 0 chr15 57947483 57947520 -45547454 + AT_rich Low_complexity Low_complexity 1 37 0 9 1027 507 256 97 30 chr15 57947816 57947981 -45546993 + B3 SINE B2 23 198 -18 9 1027 496 266 142 31 chr15 57947988 57948248 -45546726 + B4 SINE B4 3 288 -4 9 1027 415 256 11 0 chr15 57948565 57948655 -45546319 - B3 SINE B2 -125 91 1 9 1027 186 43 0 0 chr15 57948911 57948934 -45546040 + (CA)n Simple_repeat Simple_repeat 2 24 0 9 1027 317 224 51 26 chr15 57949031 57949109 -45545865 + ID_B1 SINE B4 132 211 -13 9 1027 683 143 143 0 chr15 57949184 57949310 -45545664 - B2_Mm2 SINE B2 -49 146 3 9 1027 438 250 142 27 chr15 57949535 57949683 -45545291 + RSINE1 SINE B4 1 165 0 9 1027 263 269 73 18 chr15 57949779 57949889 -45545085 - PB1D10 SINE Alu -1 116 1 9 1027 218 170 38 0 chr15 57950091 57950144 -45544830 + (TA)n Simple_repeat Simple_repeat 1 55 0 9 1027 23 0 0 0 chr15 57950436 57950459 -45544515 + AT_rich Low_complexity Low_complexity 1 23 0 9 1027 216 336 34 54 chr15 57951017 57951057 -45543917 - ID_B1 SINE B4 0 224 82 9 1027 287 283 75 0 chr15 57951057 57951163 -45543811 - B1F SINE Alu -35 114 1 9 1027 625 98 257 9 chr15 57951368 57951481 -45543493 + B1_Mus1 SINE Alu 3 143 -5 9 1027 402 21 0 0 chr15 57952097 57952144 -45542830 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 9 1027 1115 51 14 0 chr15 57952146 57952284 -45542690 - B1_Mus2 SINE Alu -6 141 2 9 1027 418 302 135 6 chr15 57952708 57952878 -45542096 + B3A SINE B2 5 196 -2 9 1027 515 222 0 18 chr15 57953580 57953690 -45541284 + PB1D10 SINE Alu 5 112 -5 9 1027 22 0 0 0 chr15 57953715 57953737 -45541237 + AT_rich Low_complexity Low_complexity 1 22 0 9 1027 216 250 191 35 chr15 57953758 57953899 -45541075 + RSINE1 SINE B4 1 163 -2 9 1027 201 230 0 0 chr15 57954075 57954149 -45540825 + CT-rich Low_complexity Low_complexity 1 74 0 9 1027 362 286 101 0 chr15 57954179 57954298 -45540676 + RSINE1 SINE B4 2 132 -33 9 1027 1198 61 0 20 chr15 57954475 57954626 -45540348 + B1_Mus1 SINE Alu 1 148 0 9 1027 180 0 0 0 chr15 57954626 57954646 -45540328 + (A)n Simple_repeat Simple_repeat 1 20 0 9 1027 1230 124 11 11 chr15 57954651 57954839 -45540135 + B2_Mm1t SINE B2 2 189 -4 9 1027 1605 47 0 0 chr15 57954885 57955077 -45539897 + B2_Mm1a SINE B2 1 192 -1 9 1027 1072 112 24 30 chr15 57955096 57955298 -45539676 + B2_Mm2 SINE B2 2 215 -1 9 1027 42 0 0 0 chr15 57955312 57955354 -45539620 + AT_rich Low_complexity Low_complexity 1 42 0 9 1027 388 169 14 0 chr15 57955378 57955449 -45539525 + B2_Mm2 SINE B2 1 72 -123 9 1027 2903 120 19 0 chr15 57955531 57955964 -45539010 + Lx2 LINE L1 6140 6580 -417 9 1027 2402 87 79 2 chr15 57955970 57956384 -45538590 + RMER16 LTR ERVK 1 532 -1 9 1027 2757 94 64 0 chr15 57956384 57956777 -45538197 + Lx2 LINE L1 6580 6997 0 9 1027 24 0 0 0 chr15 57956780 57956804 -45538170 + AT_rich Low_complexity Low_complexity 1 24 0 9 1027 951 117 92 0 chr15 57957087 57957250 -45537724 + B2_Mm2 SINE B2 15 192 -3 9 1027 358 161 99 0 chr15 57957938 57958019 -45536955 + PB1D10 SINE Alu 2 90 -27 9 1027 974 109 7 33 chr15 57958514 57958666 -45536308 - B1_Mus1 SINE Alu 0 148 1 9 1027 664 151 21 42 chr15 57958810 57958946 -45536028 + B2_Mm2 SINE B2 16 160 -38 9 1027 594 187 121 8 chr15 57959047 57959171 -45535803 + B1_Mus1 SINE Alu 5 142 -6 9 1027 1377 202 155 12 chr15 57959247 57959583 -45535391 - ORR1C2 LTR MaLR 0 384 1 1 1027 667 148 145 7 chr15 57960033 57960179 -45534795 + ORR1B1 LTR MaLR 1 150 -244 1 1027 1107 82 14 0 chr15 57960179 57960326 -45534648 - B1_Mur4 SINE Alu 0 150 2 1 1027 403 222 69 62 chr15 57960326 57960363 -45534611 + ORR1B1 LTR MaLR 111 152 -174 1 1027 829 35 0 26 chr15 57960338 57960454 -45534520 - B1_Mm SINE Alu 0 147 35 1 1027 1311 128 22 9 chr15 57960475 57960704 -45534270 + ORR1B1 LTR MaLR 155 386 -8 1 1027 245 293 0 0 chr15 57960708 57960766 -45534208 - PB1D7 SINE Alu -20 100 43 1 1027 505 263 130 15 chr15 57960768 57960930 -45534044 - B3A SINE B2 -18 177 1 1 1027 336 193 0 153 chr15 57961264 57961362 -45533612 + B1_Mur2 SINE Alu 67 149 0 1 1027 773 89 86 36 chr15 57961685 57961825 -45533149 + B1_Mm SINE Alu 1 147 0 1 1027 757 275 75 60 chr15 57961849 57962116 -45532858 + B4A SINE B4 22 292 0 1 1027 476 274 44 9 chr15 57962290 57962404 -45532570 + RSINE1 SINE B4 1 118 -47 1 1027 1130 62 7 0 chr15 57962517 57962663 -45532311 - B1_Mus2 SINE Alu 0 147 1 1 1027 342 0 0 0 chr15 57963030 57963068 -45531906 + (TTTTC)n Simple_repeat Simple_repeat 3 40 0 1 1027 1482 78 11 0 chr15 57963079 57963270 -45531704 - B2_Mm1t SINE B2 0 193 1 1 1027 1108 56 0 20 chr15 57963339 57963485 -45531489 + B1_Mus1 SINE Alu 2 144 -4 1 1027 246 226 19 0 chr15 57963639 57963692 -45531282 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1027 255 135 43 239 chr15 57964168 57964285 -45530689 + ID_B1 SINE B4 125 218 -6 1 1027 467 29 73 0 chr15 57964222 57964290 -45530684 + B1_Mur4 SINE Alu 77 149 -1 1 1027 602 38 366 54 chr15 57964806 57964918 -45530056 - B1_Mus2 SINE Alu 0 147 1 1 1027 1184 68 0 0 chr15 57965154 57965301 -45529673 + B1_Mus2 SINE Alu 1 147 0 1 1027 225 0 0 0 chr15 57965301 57965326 -45529648 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1027 383 295 59 42 chr15 57967208 57967445 -45527529 + RLTR19-int LTR ERVK 2330 2570 -3567 1 1027 227 79 26 0 chr15 57967449 57967487 -45527487 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1 1027 1182 48 7 7 chr15 57967489 57967636 -45527338 - B1_Mus2 SINE Alu 0 147 1 1 1027 257 248 93 93 chr15 57967712 57967863 -45527111 + MYSERV6-int LTR ERVK 7358 7508 -1451 1 1027 281 265 33 33 chr15 57967833 57967954 -45527020 + MYSERV6-int LTR ERVK 8428 8548 -411 1 1027 338 224 20 124 chr15 57967940 57968093 -45526881 + RLTR19-int LTR ERVK 2849 2985 -3152 1 1027 485 150 29 66 chr15 57968229 57968361 -45526613 + B1_Mur4 SINE Alu 1 126 -1 1 1027 473 260 24 112 chr15 57968476 57968582 -45526392 - ID_B1 SINE B4 -68 156 54 1 1027 186 43 0 0 chr15 57968582 57968605 -45526369 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1 1027 937 120 20 138 chr15 57968606 57968809 -45526165 - B2_Mm2 SINE B2 -15 180 2 1 1027 473 260 24 112 chr15 57968809 57968869 -45526105 - ID SINE ID -171 53 3 1 1027 610 243 180 63 chr15 57968949 57969265 -45525709 + MER67B LTR ERV1 41 393 -268 1 1027 332 247 141 39 chr15 57969298 57969454 -45525520 - MIR SINE MIR -28 234 63 1 1027 429 276 47 47 chr15 57969481 57969610 -45525364 + ID_B1 SINE B4 84 212 -12 1 1027 405 146 11 43 chr15 57969724 57969817 -45525157 + ORR1A4 LTR MaLR 1 90 -239 1 1027 2306 164 118 31 chr15 57969826 57969964 -45525010 + ORR1A4-int LTR MaLR 68 205 -1758 1 1027 1316 97 27 5 chr15 57969964 57970150 -45524824 - B2_Mm2 SINE B2 -5 190 1 1 1027 2306 164 118 31 chr15 57970150 57970534 -45524440 + ORR1A4-int LTR MaLR 206 636 -1327 1 1027 1340 80 26 11 chr15 57970547 57970578 -45524396 - B2_Mm1t SINE B2 0 193 161 1 1027 342 0 0 0 chr15 57970578 57970616 -45524358 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 1 1027 1340 80 26 11 chr15 57970616 57970774 -45524200 - B2_Mm1t SINE B2 -33 160 1 1 1027 1325 103 16 0 chr15 57970835 57971020 -45523954 - B2_Mm2 SINE B2 -6 189 2 1 1027 2963 50 56 31 chr15 57971179 57971569 -45523405 + MTB LTR MaLR 1 400 0 1 1027 366 286 36 36 chr15 57971694 57971861 -45523113 - LTR41B LTR ERVL -591 167 1 1 1027 363 348 8 0 chr15 57972183 57972301 -45522673 - PB1D7 SINE Alu -1 119 1 1 1027 338 293 63 24 chr15 57973558 57973684 -45521290 - MIR SINE MIR -25 237 107 1 1027 756 122 43 0 chr15 57973949 57974088 -45520886 - URR1A DNA MER1_type -3 223 79 1 1027 183 333 40 30 chr15 57974345 57974444 -45520530 - L2a LINE L2 -1 3425 3326 1 1027 872 218 87 54 chr15 57974448 57974725 -45520249 - RLTR25B LTR ERVK 0 1028 743 1 1027 956 55 31 0 chr15 57974992 57975119 -45519855 + B1_Mus2 SINE Alu 1 131 -16 1 1027 2753 158 163 19 chr15 57975185 57975800 -45519174 - RLTR25B LTR ERVK -325 703 1 1 1027 820 247 44 48 chr15 57976609 57976860 -45518114 + MTEa LTR MaLR 1 250 -129 1 1027 412 133 0 39 chr15 57976930 57977008 -45517966 + B1_Mur3 SINE Alu 75 149 0 1 1027 322 229 333 0 chr15 57977230 57977369 -45517605 - B3 SINE B2 -30 186 2 1 1027 264 100 0 0 chr15 57977383 57977423 -45517551 + (TCCCC)n Simple_repeat Simple_repeat 3 42 0 1 1027 298 221 88 0 chr15 57977425 57977493 -45517481 - PB1D9 SINE Alu -11 109 36 1 1027 450 121 0 0 chr15 57977489 57977555 -45517419 - B2_Mm2 SINE B2 -128 67 2 1 1027 255 31 0 0 chr15 57977558 57977590 -45517384 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 1027 849 109 0 0 chr15 57977590 57977718 -45517256 - B1_Mus2 SINE Alu -10 137 10 1 1027 797 146 39 77 chr15 57979054 57979210 -45515764 - B1_Mur4 SINE Alu 0 150 1 1 1027 652 234 125 6 chr15 57979284 57979460 -45515514 - B3A SINE B2 0 198 2 1 1027 313 207 118 35 chr15 57979466 57979551 -45515423 - PB1D9 SINE Alu -7 113 22 1 1027 464 196 124 9 chr15 57980198 57980311 -45514663 - B1_Mus2 SINE Alu -5 142 17 1 1027 1296 14 0 0 chr15 57980351 57980498 -45514476 + B1_Mm SINE Alu 1 147 0 1 1027 261 0 0 0 chr15 57980503 57980532 -45514442 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1027 647 147 1 5 chr15 57980849 57980963 -45514011 + B1_Mus2 SINE Alu 34 143 -6 1 1027 1170 68 0 13 chr15 57981070 57981220 -45513754 - B1_Mus1 SINE Alu 0 148 1 1 1027 945 139 249 0 chr15 57981283 57981456 -45513518 - B3 SINE B2 0 216 1 1 1027 1425 75 21 0 chr15 57981460 57981647 -45513327 - B2_Mm2 SINE B2 -4 191 1 1 1027 26 50 0 0 chr15 57981671 57981711 -45513263 + AT_rich Low_complexity Low_complexity 1 40 0 1 1027 718 216 36 0 chr15 57981711 57981850 -45513124 - B1_Mur1 SINE Alu -5 144 1 1 1027 735 238 27 11 chr15 57981887 57982070 -45512904 - B3 SINE B2 -17 199 14 1 1027 352 272 43 17 chr15 57982383 57982499 -45512475 + MTEb LTR MaLR 57 175 -184 1 1027 365 291 0 35 chr15 57982588 57982702 -45512272 + MTEb LTR MaLR 248 357 -22 1 1027 527 208 115 0 chr15 57983524 57983654 -45511320 - B1_Mur1 SINE Alu 0 149 5 1 1027 359 286 10 10 chr15 57984363 57984462 -45510512 + CT-rich Low_complexity Low_complexity 4 102 0 1 1027 360 253 25 0 chr15 57984578 57984657 -45510317 + RSINE1 SINE B4 41 121 -44 1 1027 324 0 0 0 chr15 57984657 57984693 -45510281 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1027 936 130 0 20 chr15 57985322 57985471 -45509503 - B1_Mur3 SINE Alu 0 149 4 1 1027 345 200 13 13 chr15 57986187 57986263 -45508711 + B4A SINE B4 2 77 -215 1 1027 902 147 28 0 chr15 57986287 57986430 -45508544 - B1_Mur4 SINE Alu -3 147 1 1 1027 498 284 86 95 chr15 57986430 57986485 -45508489 + B4A SINE B4 57 101 -191 1 1027 1237 103 49 0 chr15 57986485 57986670 -45508304 - B2_Mm2 SINE B2 0 195 2 1 1027 498 284 86 95 chr15 57986670 57986836 -45508138 + B4A SINE B4 102 276 -16 1 1027 1424 83 0 10 chr15 57986890 57987084 -45507890 - B2_Mm2 SINE B2 -2 193 2 1 1027 24 67 0 0 chr15 57987166 57987211 -45507763 + AT_rich Low_complexity Low_complexity 1 45 0 1 1027 825 55 0 0 chr15 57987215 57987324 -45507650 + B1_Mm SINE Alu 29 137 -10 1 1027 216 0 0 0 chr15 57987324 57987348 -45507626 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1027 830 170 0 0 chr15 57987373 57987508 -45507466 + B1_Mus1 SINE Alu 14 148 0 1 1027 288 0 0 0 chr15 57987508 57987540 -45507434 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1027 769 208 122 25 chr15 57987582 57987779 -45507195 - B3 SINE B2 0 216 1 1 1027 591 195 74 52 chr15 57987833 57987899 -45507075 - B1_Mur1 SINE Alu -6 143 84 1 1027 1280 92 10 47 chr15 57987899 57988092 -45506882 - B2_Mm1t SINE B2 -7 186 1 1 1027 591 195 74 52 chr15 57988092 57988160 -45506814 - B1_Mur1 SINE Alu -66 83 6 1 1027 627 210 61 8 chr15 57988196 57988368 -45506606 - B3 SINE B2 -16 179 7 1 1027 1124 49 7 20 chr15 57988393 57988540 -45506434 + B1_Mus1 SINE Alu 3 147 -1 1 1027 354 225 34 0 chr15 57988723 57988812 -45506162 - L1MD3 LINE L1 -16 7979 7888 1 1027 856 194 73 44 chr15 57988834 57989039 -45505935 - B3 SINE B2 0 216 6 1 1027 474 319 52 4 chr15 57989117 57989350 -45505624 - L1MC4a LINE L1 -214 7668 7425 1 1027 376 34 0 33 chr15 57990334 57990394 -45504580 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 1027 824 262 43 19 chr15 57990394 57990651 -45504323 - B4A SINE B4 -23 269 7 1 1027 1164 81 0 13 chr15 57990807 57990957 -45504017 - B1_Mus1 SINE Alu 0 148 1 1 1027 876 135 6 49 chr15 57990964 57991128 -45503846 - B2_Mm1t SINE B2 -9 184 28 1 1027 204 40 0 0 chr15 57991210 57991235 -45503739 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 1027 265 319 21 21 chr15 57991235 57991331 -45503643 - B1F SINE Alu -11 138 43 1 1027 1162 101 90 0 chr15 57991404 57991582 -45503392 + B2_Mm2 SINE B2 2 195 0 1 1027 1130 89 0 0 chr15 57991827 57991973 -45503001 - B1_Mus2 SINE Alu -1 146 1 1 1027 299 209 117 58 chr15 57991974 57992111 -45502863 - B4A SINE B4 -64 228 84 1 1027 602 143 53 9 chr15 57992124 57992237 -45502737 + PB1D9 SINE Alu 1 118 -2 1 1027 485 179 74 0 chr15 57992265 57992360 -45502614 + B3A SINE B2 8 109 -89 1 1027 584 189 0 9 chr15 57992401 57992513 -45502461 + B3 SINE B2 1 111 -105 1 1027 25 0 0 0 chr15 57992567 57992592 -45502382 + AT_rich Low_complexity Low_complexity 1 25 0 1 1027 195 186 0 0 chr15 57992606 57992649 -45502325 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1027 342 256 0 0 chr15 57992649 57992727 -45502247 - B4 SINE B4 -214 78 1 1 1027 1080 89 7 0 chr15 57992752 57992898 -45502076 - B1_Mus1 SINE Alu 0 148 2 1 1027 1055 92 7 0 chr15 57992963 57993104 -45501870 + B1_Mus1 SINE Alu 1 142 -6 1 1027 462 204 0 0 chr15 57993108 57993206 -45501768 + A-rich Low_complexity Low_complexity 1 98 0 1 1027 649 243 7 13 chr15 57993374 57993524 -45501450 - B1F SINE Alu 0 149 1 1 1027 509 318 78 6 chr15 57994756 57994969 -45500005 - B4A SINE B4 0 292 68 1 1027 1342 79 25 31 chr15 57994978 57995174 -45499800 - B2_Mm2 SINE B2 0 195 1 1 1027 1405 69 16 26 chr15 57995193 57995387 -45499587 - B2_Mm2 SINE B2 -3 192 1 1 1027 270 234 9 153 chr15 57995391 57995416 -45499558 + MT2B LTR ERVL 145 153 -448 1 1027 472 228 8 34 chr15 57995416 57995534 -45499440 + B1_Mur2 SINE Alu 2 116 -33 1 1027 3181 69 5 7 chr15 57995542 57995964 -45499010 - BGLII LTR ERVK 0 421 1 1 1027 855 163 20 20 chr15 57996054 57996204 -45498770 + B1_Mur4 SINE Alu 1 150 0 1 1027 309 183 0 0 chr15 57996219 57996279 -45498695 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 1027 1050 287 88 11 chr15 57996961 57997338 -45497636 - MTD LTR MaLR -13 406 1 1 1027 192 153 32 48 chr15 57997397 57997459 -45497515 + CT-rich Low_complexity Low_complexity 5 65 0 1 1027 415 237 35 21 chr15 57997461 57997603 -45497371 - Lx2B LINE L1 -5 6995 6852 1 1027 259 253 83 12 chr15 57997735 57997819 -45497155 - MTE2b LTR MaLR -30 349 260 1 1027 1595 204 87 11 chr15 57998153 57998509 -45496465 + MTD LTR MaLR 23 405 -14 1 1027 183 301 59 50 chr15 57998891 57999010 -45495964 - L2c LINE L2 -58 3329 3210 1 1027 21 36 0 0 chr15 57999012 57999040 -45495934 + AT_rich Low_complexity Low_complexity 1 28 0 1 1027 1320 76 0 11 chr15 58000566 58000725 -45494249 + B2_Mm2 SINE B2 1 158 -37 1 1027 186 43 0 0 chr15 58000725 58000748 -45494226 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 2 1027 1320 76 0 11 chr15 58000748 58000762 -45494212 + B2_Mm2 SINE B2 159 172 -23 1 1027 584 197 34 47 chr15 58000949 58001098 -45493876 - B1_Mur2 SINE Alu -1 148 2 3 1027 218 260 12 94 chr15 58001160 58001245 -45493729 + B4A SINE B4 35 112 -180 4 1027 454 163 61 0 chr15 58001392 58001490 -45493484 - Lx5 LINE L1 -11 7039 6936 5 1027 1297 105 5 16 chr15 58001539 58001733 -45493241 - B2_Mm2 SINE B2 -3 192 1 6 1027 339 239 0 0 chr15 58001787 58001875 -45493099 + (CA)n Simple_repeat Simple_repeat 2 89 0 7 1027 358 301 11 0 chr15 58002029 58002122 -45492852 - PB1D7 SINE Alu -2 118 25 8 1027 224 59 0 29 chr15 58002242 58002277 -45492697 + (ATTG)n Simple_repeat Simple_repeat 3 36 0 9 1027 233 176 13 139 chr15 58002728 58002807 -45492167 - MIRm SINE MIR -87 189 121 1 1027 1609 27 32 0 chr15 58003312 58003499 -45491475 - B2_Mm1a SINE B2 0 193 1 1 1027 570 277 0 0 chr15 58003520 58003632 -45491342 - RSINE1 SINE B4 -49 116 5 1 1027 264 286 65 0 chr15 58003800 58003877 -45491097 - B4 SINE B4 -210 82 1 1 1027 198 0 0 0 chr15 58003886 58003908 -45491066 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1 1027 374 106 14 57 chr15 58003908 58003978 -45490996 - B1_Mus2 SINE Alu -10 137 71 1 1027 6631 108 41 9 chr15 58003980 58004998 -45489976 - Lx4A LINE L1 -4 7054 6004 1 1027 1132 105 40 23 chr15 58005026 58005202 -45489772 - B2_Mm2 SINE B2 -15 180 2 1 1027 1473 50 71 0 chr15 58005391 58005573 -45489401 + B2_Mm2 SINE B2 1 195 0 1 1027 895 289 91 28 chr15 58005653 58005953 -45489021 + ORR1E LTR MaLR 10 324 -35 1 1027 1155 69 0 0 chr15 58005953 58006097 -45488877 - B1_Mus1 SINE Alu -2 146 3 2 1027 557 332 40 80 chr15 58006097 58006172 -45488802 + ORR1E LTR MaLR 295 369 -1 1 1027 1584 298 59 12 chr15 58006186 58006696 -45488278 + RMER5 LTR ERV1 1 534 0 2 1027 194 209 148 23 chr15 58006864 58006952 -45488022 + L2b LINE L2 2964 3062 -364 2 1027 447 106 0 0 chr15 58006952 58007018 -45487956 + (TG)n Simple_repeat Simple_repeat 1 66 0 2 1027 454 331 7 22 chr15 58007030 58007166 -45487808 + L2b LINE L2 3240 3373 -2 2 1027 787 266 110 16 chr15 58008254 58008499 -45486475 - B4A SINE B4 -21 271 4 2 1027 333 0 0 0 chr15 58009899 58009936 -45485038 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1027 366 74 0 0 chr15 58010858 58010912 -45484062 + (TTCC)n Simple_repeat Simple_repeat 1 54 0 2 1027 1280 94 77 6 chr15 58010926 58010947 -45484027 - B2_Mm2 SINE B2 -1 194 160 2 1027 459 0 0 0 chr15 58010947 58010998 -45483976 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 2 1027 1280 94 77 6 chr15 58010998 58011157 -45483817 - B2_Mm2 SINE B2 -36 159 1 2 1027 377 275 77 144 chr15 58013205 58013376 -45481598 + B3A SINE B2 1 168 -27 2 1027 360 0 0 0 chr15 58013376 58013416 -45481558 + (TATG)n Simple_repeat Simple_repeat 4 43 0 3 1027 245 275 77 144 chr15 58013416 58013452 -45481522 + B2_Mm2 SINE B2 169 194 -1 2 1027 779 278 55 125 chr15 58013466 58013778 -45481196 + B4A SINE B4 1 290 -2 3 1027 1464 196 81 17 chr15 58014034 58014379 -45480595 - MTD LTR MaLR -53 368 1 3 1027 249 33 0 0 chr15 58014535 58014565 -45480409 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1027 1043 147 6 6 chr15 58015399 58015563 -45479411 + URR1B DNA MER1_type 2 165 -60 3 1027 351 0 0 0 chr15 58016245 58016284 -45478690 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1027 752 154 0 58 chr15 58016309 58016447 -45478527 - B1_Mus1 SINE Alu -18 130 1 3 1027 506 237 49 73 chr15 58016456 58016579 -45478395 - Lx8 LINE L1 -2 7471 7352 3 1027 996 220 32 46 chr15 58016579 58016798 -45478176 - B3 SINE B2 0 216 1 3 1027 506 237 49 73 chr15 58016798 58016879 -45478095 - Lx8 LINE L1 -122 7351 7272 3 1027 226 106 39 78 chr15 58016880 58016931 -45478043 - Lx8 LINE L1 -170 7303 7255 3 1027 780 179 0 58 chr15 58017163 58017317 -45477657 + B1_Mur3 SINE Alu 5 149 0 4 1027 331 338 8 0 chr15 58017653 58017786 -45477188 + (TG)n Simple_repeat Simple_repeat 2 135 0 4 1027 842 149 108 49 chr15 58017872 58018081 -45476893 - B3 SINE B2 0 216 19 4 1027 611 226 58 14 chr15 58019569 58019708 -45475266 - ID_B1 SINE B4 -16 208 64 4 1027 388 313 101 12 chr15 58019995 58020163 -45474811 + MER2 DNA MER2_type 155 337 -8 4 1027 195 319 72 31 chr15 58020169 58020266 -45474708 + MIRb SINE MIR 132 232 -36 4 1027 351 0 0 0 chr15 58020336 58020375 -45474599 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1027 311 359 12 54 chr15 58020392 58020560 -45474414 - MIR SINE MIR -1 261 101 4 1027 188 316 83 41 chr15 58021180 58021325 -45473649 + MIRc SINE MIR 52 202 -66 4 1027 321 282 101 18 chr15 58023326 58023486 -45471488 + MIR3 SINE MIR 15 196 -12 4 1027 705 24 0 0 chr15 58024038 58024121 -45470853 + (GA)n Simple_repeat Simple_repeat 1 83 0 5 1027 948 224 17 6 chr15 58024700 58024880 -45470094 - B3 SINE B2 -33 183 2 5 1027 1018 138 174 5 chr15 58025319 58025509 -45469465 + URR1B DNA MER1_type 1 222 -3 5 1027 219 36 0 0 chr15 58025726 58025754 -45469220 + (GGA)n Simple_repeat Simple_repeat 1 28 0 5 1027 207 306 78 48 chr15 58026568 58026671 -45468303 - L2b LINE L2 -18 3357 3252 5 1027 204 247 26 64 chr15 58026754 58026832 -45468142 + MIRc SINE MIR 169 243 -25 5 1027 860 137 13 33 chr15 58026955 58027106 -45467868 - B1_Mur3 SINE Alu 0 149 2 5 1027 667 278 40 34 chr15 58027108 58027283 -45467691 - MER58A DNA MER1_type -30 194 19 5 1027 305 238 87 29 chr15 58027338 58027442 -45467532 + MIRb SINE MIR 124 233 -35 5 1027 351 304 195 17 chr15 58027721 58027895 -45467079 - MIRb SINE MIR -21 247 43 5 1027 459 0 0 0 chr15 58028824 58028875 -45466099 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1027 400 297 57 41 chr15 58028885 58029008 -45465966 - RSINE1 SINE B4 -37 128 4 6 1027 191 347 85 30 chr15 58029030 58029229 -45465745 + L2 LINE L2 2824 3033 -386 6 1027 441 0 0 0 chr15 58029517 58029566 -45465408 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1027 824 124 85 0 chr15 58029973 58030102 -45464872 + B1_Mur3 SINE Alu 3 142 -7 6 1027 494 219 26 9 chr15 58030130 58030245 -45464729 + PB1D9 SINE Alu 2 118 -2 6 1027 240 350 26 102 chr15 58030848 58031074 -45463900 + L2b LINE L2 2941 3149 -238 6 1027 1178 28 28 0 chr15 58032366 58032509 -45462465 + B1_Mm SINE Alu 1 147 0 6 1027 532 287 19 77 chr15 58032544 58032699 -45462275 + RSINE1 SINE B4 20 165 0 6 1027 262 314 50 15 chr15 58032753 58032889 -45462085 + MIRc SINE MIR 8 146 -122 6 1027 339 309 170 0 chr15 58033375 58033563 -45461411 - MER58B DNA MER1_type -1 340 121 7 1027 307 300 0 0 chr15 58033659 58033739 -45461235 - ID4 SINE ID -1 82 3 7 1027 379 113 0 27 chr15 58033858 58033931 -45461043 + (TA)n Simple_repeat Simple_repeat 1 71 0 7 1027 217 325 0 78 chr15 58033994 58034084 -45460890 - RSINE1 SINE B4 -2 163 81 7 1027 547 289 13 7 chr15 58034149 58034299 -45460675 - RSINE1 SINE B4 -13 152 2 7 1027 230 323 83 23 chr15 58034817 58034950 -45460024 + MER5B DNA MER1_type 22 162 -16 7 1027 296 0 51 0 chr15 58036655 58036694 -45458280 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 7 1027 23 54 0 0 chr15 58038177 58038214 -45456760 + AT_rich Low_complexity Low_complexity 1 37 0 7 1027 310 283 17 102 chr15 58038313 58038431 -45456543 - ID_B1 SINE B4 -10 214 107 7 1027 1428 63 10 25 chr15 58038470 58038666 -45456308 - B2_Mm1t SINE B2 0 193 1 7 1027 268 256 271 8 chr15 58038673 58038795 -45456179 - ID_B1 SINE B4 -70 154 1 8 1027 992 141 56 11 chr15 58039092 58039271 -45455703 + B2_Mm2 SINE B2 2 188 -7 8 1027 501 246 182 21 chr15 58039286 58039473 -45455501 - ID_B1 SINE B4 -3 221 5 8 1027 261 257 14 14 chr15 58040037 58040108 -45454866 + CT-rich Low_complexity Low_complexity 1 71 0 8 1027 473 272 9 0 chr15 58040128 58040242 -45454732 - PB1D9 SINE Alu -5 115 1 8 1027 500 239 50 7 chr15 58040248 58040387 -45454587 - B1F SINE Alu 0 149 5 8 1027 396 0 0 0 chr15 58040899 58040943 -45454031 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 8 1027 1149 30 0 0 chr15 58040943 58041076 -45453898 - B1_Mus2 SINE Alu -14 133 1 8 1027 261 0 0 0 chr15 58041661 58041690 -45453284 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 1027 324 0 0 0 chr15 58042460 58042496 -45452478 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 1027 190 281 100 40 chr15 58042928 58043028 -45451946 + MIRb SINE MIR 163 268 0 9 1027 705 176 0 63 chr15 58043309 58043467 -45451507 - B1_Mus1 SINE Alu 0 148 1 9 1027 778 118 0 86 chr15 58044180 58044319 -45450655 - B1_Mus1 SINE Alu -14 134 8 9 1027 315 0 0 0 chr15 58045049 58045084 -45449890 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 1027 26 0 0 0 chr15 58046478 58046504 -45448470 + GC_rich Low_complexity Low_complexity 1 26 0 9 1027 690 316 32 50 chr15 58047638 58047921 -45447053 - B4A SINE B4 -1 291 14 9 1027 198 0 0 0 chr15 58049180 58049202 -45445772 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 9 1027 2961 168 16 121 chr15 58049205 58049465 -45445509 + RMER15 LTR ERVL 1 194 -381 9 1027 342 61 0 0 chr15 58049465 58049514 -45445460 + (CAAAA)n Simple_repeat Simple_repeat 3 51 0 9 1027 2961 168 16 121 chr15 58049514 58049890 -45445084 + RMER15 LTR ERVL 195 570 -5 9 1027 289 243 9 9 chr15 58050637 58050745 -45444229 + CT-rich Low_complexity Low_complexity 4 111 0 9 1027 348 24 0 0 chr15 58050829 58050870 -45444104 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1027 504 0 0 0 chr15 58050870 58050925 -45444049 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 1027 693 241 60 36 chr15 58050926 58051094 -45443880 - B3A SINE B2 -26 172 1 1 1027 339 25 0 0 chr15 58051116 58051156 -45443818 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1027 408 88 0 0 chr15 58052500 58052557 -45442417 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1027 525 217 9 19 chr15 58052563 58052671 -45442303 - RSINE1 SINE B4 -25 140 34 1 1027 251 204 0 0 chr15 58052743 58052792 -45442182 - RMER15 LTR ERVL -104 471 423 1 1027 408 206 62 52 chr15 58052788 58052885 -45442089 - RMER15 LTR ERVL -107 468 371 1 1027 699 260 27 53 chr15 58053011 58053057 -45441917 + B3A SINE B2 1 42 -156 1 1027 2016 112 40 116 chr15 58053057 58053453 -45441521 + ORR1B2 LTR MaLR 1 366 -1 1 1027 699 250 5 167 chr15 58053453 58053627 -45441347 + B3A SINE B2 43 185 -10 1 1027 191 36 0 35 chr15 58053640 58053669 -45441305 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1 1027 320 339 14 99 chr15 58053669 58053810 -45441164 - ID_B1 SINE B4 -10 214 86 1 1027 222 302 76 17 chr15 58054012 58054130 -45440844 - MIRb SINE MIR -40 228 104 1 1027 1144 75 0 0 chr15 58054142 58054289 -45440685 + B1_Mus1 SINE Alu 2 148 0 1 1027 191 163 0 61 chr15 58054289 58054387 -45440587 + A-rich Low_complexity Low_complexity 3 94 0 1 1027 308 208 14 14 chr15 58054498 58054571 -45440403 - ID2 SINE ID -9 74 2 1 1027 207 0 0 0 chr15 58054814 58054837 -45440137 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1027 546 305 123 23 chr15 58055665 58055957 -45439017 + ORR1E LTR MaLR 25 367 -3 1 1027 655 279 134 25 chr15 58056498 58056737 -45438237 + MTEa LTR MaLR 34 298 -81 1 1027 1308 228 140 3 chr15 58056750 58057106 -45437868 + MTD LTR MaLR 1 405 -14 1 1027 789 74 8 16 chr15 58057394 58057518 -45437456 + (TTCC)n Simple_repeat Simple_repeat 3 125 0 1 1027 694 169 53 23 chr15 58057536 58057669 -45437305 + B1_Mur2 SINE Alu 3 139 -10 1 1027 1115 252 182 29 chr15 58057689 58058179 -45436795 - Lx9 LINE L1 -21 7623 7059 1 1027 206 216 0 0 chr15 58058204 58058241 -45436733 + (TGAG)n Simple_repeat Simple_repeat 4 40 0 1 1027 1193 133 0 11 chr15 58059029 58059211 -45435763 - B2_Mm2 SINE B2 -14 181 2 1 1027 551 295 66 18 chr15 58059218 58059446 -45435528 - Tigger5 DNA MER2_type 0 2406 2168 1 1027 258 74 56 0 chr15 58059930 58059984 -45434990 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 1 1027 922 101 6 11 chr15 58059997 58060178 -45434796 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1 1027 1251 179 153 181 chr15 58060178 58060654 -45434320 - MT2A LTR ERVL -70 463 1 1 1027 14296 62 10 17 chr15 58061410 58064037 -45430937 - L1VL4 LINE L1 -761 2798 190 1 1027 612 140 9 9 chr15 58064095 58064203 -45430771 - MT2C_Mm LTR ERVL -75 400 293 1 1027 610 315 113 7 chr15 58064341 58064616 -45430358 - LTR33 LTR ERVL -168 347 44 1 1028 279 220 17 0 chr15 58065147 58065206 -45429768 - MTE2a LTR MaLR -29 350 291 1 1028 244 340 53 0 chr15 58065506 58065600 -45429374 + MER81 DNA AcHobo 14 112 -2 1 1028 440 255 166 46 chr15 58066483 58066742 -45428232 - B4A SINE B4 0 292 3 1 1028 662 247 240 0 chr15 58067416 58067519 -45427455 - L1MB7 LINE L1 -97 6087 5952 1 1028 243 0 0 0 chr15 58067519 58067546 -45427428 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 1028 662 247 240 0 chr15 58067546 58067721 -45427253 - L1MB7 LINE L1 -233 5951 5743 1 1028 991 269 81 7 chr15 58068091 58068375 -45426599 + MTD LTR MaLR 18 322 -97 1 1028 474 226 0 57 chr15 58068385 58068507 -45426467 + RMER2 LTR ERV1 1 115 -452 1 1028 403 216 120 139 chr15 58068565 58068823 -45426151 + RMER2 LTR ERV1 288 540 -27 1 1028 245 243 45 8 chr15 58068825 58068914 -45426060 + MTD LTR MaLR 290 419 0 1 1028 933 262 43 22 chr15 58069674 58070018 -45424956 + MTE2a LTR MaLR 7 379 0 1 1028 218 322 43 11 chr15 58070424 58070518 -45424456 - MIR3 SINE MIR -24 184 88 1 1028 498 240 16 16 chr15 58070623 58070746 -45424228 - B4A SINE B4 -2 290 168 1 1028 231 267 17 0 chr15 58070749 58070809 -45424165 - B4A SINE B4 -231 61 1 1 1028 2466 97 106 7 chr15 58070878 58071295 -45423679 - RLTR22_Mur LTR ERVK -384 1464 1007 1 1028 2952 83 29 2 chr15 58071301 58071722 -45423252 - L1_Mus3 LINE L1 -12 6626 6195 1 1028 209 329 47 18 chr15 58071828 58071991 -45422983 + MIR SINE MIR 95 260 -2 1 1028 1053 211 24 5 chr15 58072128 58072338 -45422636 - B3 SINE B2 -1 215 2 1 1028 324 118 253 21 chr15 58072381 58072476 -45422498 - Lx8 LINE L1 -2 7471 7355 1 1028 432 265 208 60 chr15 58072752 58073021 -45421953 + Tigger5 DNA MER2_type 2092 2400 -6 1 1028 254 132 0 0 chr15 58073258 58073296 -45421678 - RLTR25A LTR ERVK 0 1103 1066 1 1028 4139 145 291 8 chr15 58073300 58073496 -45421478 - RLTR25A LTR ERVK -89 939 696 1 1028 1259 71 31 42 chr15 58073496 58073688 -45421286 - B2_Mm2 SINE B2 -4 191 2 1 1028 4139 155 57 10 chr15 58073688 58074344 -45420630 - RLTR25A LTR ERVK -408 695 1 1 1028 668 252 0 14 chr15 58075494 58075639 -45419335 - B1_Mur1 SINE Alu 0 149 7 1 1028 479 281 163 25 chr15 58075705 58076024 -45418950 - MLT1A1 LTR MaLR -2 363 1 1 1028 221 185 30 15 chr15 58076076 58076105 -45418869 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1028 189 74 0 0 chr15 58076105 58076132 -45418842 + (TGG)n Simple_repeat Simple_repeat 3 29 0 1 1028 221 185 30 15 chr15 58076132 58076168 -45418806 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1028 535 203 8 48 chr15 58076204 58076328 -45418646 - B4 SINE B4 -72 220 102 1 1028 280 148 16 16 chr15 58076350 58076412 -45418562 + CT-rich Low_complexity Low_complexity 5 66 0 1 1028 401 181 24 24 chr15 58076433 58076518 -45418456 - B4 SINE B4 -206 86 2 1 1028 1785 100 40 62 chr15 58077253 58077574 -45417400 + ORR1A4 LTR MaLR 8 321 -8 1 1028 405 0 0 0 chr15 58078343 58078388 -45416586 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1028 1142 292 54 0 chr15 58078399 58078735 -45416239 - ORR1E LTR MaLR -5 354 1 1 1028 245 291 38 113 chr15 58078919 58079078 -45415896 + MLT1D LTR MaLR 4 150 -477 1 1028 326 296 17 17 chr15 58079119 58079236 -45415738 + MLT1D LTR MaLR 382 498 -7 1 1028 216 0 0 0 chr15 58079382 58079406 -45415568 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 1028 452 224 9 27 chr15 58079953 58080063 -45414911 - PB1D10 SINE Alu 0 117 10 1 1028 257 229 120 19 chr15 58080405 58080504 -45414470 + MER91B DNA Tip100 1 110 -30 1 1028 297 243 19 9 chr15 58080693 58080801 -45414173 + CT-rich Low_complexity Low_complexity 4 112 0 1 1028 737 76 64 0 chr15 58080781 58080938 -45414036 + (TC)n Simple_repeat Simple_repeat 1 167 0 1 1028 421 297 8 8 chr15 58080938 58080950 -45414024 - PB1D7 SINE Alu -1 119 108 1 1028 333 0 0 0 chr15 58080950 58080987 -45413987 + (TTTC)n Simple_repeat Simple_repeat 4 40 0 1 1028 436 242 10 10 chr15 58080987 58081093 -45413881 - B1F SINE Alu -13 107 1 1 1028 286 293 10 29 chr15 58081002 58081104 -45413870 - B4A SINE B4 -117 175 76 1 1028 1109 68 0 0 chr15 58081345 58081478 -45413496 + B1_Mus2 SINE Alu 2 134 -13 1 1028 356 0 23 0 chr15 58081478 58081522 -45413452 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 1 1028 237 341 138 0 chr15 58081661 58081827 -45413147 - MIR3 SINE MIR -18 190 7 1 1028 180 97 0 0 chr15 58081969 58082000 -45412974 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1028 331 304 0 0 chr15 58082072 58082151 -45412823 - ID2 SINE ID -3 80 2 1 1028 606 256 131 76 chr15 58083691 58084034 -45410940 + MTEa LTR MaLR 1 362 -17 1 1028 251 301 45 20 chr15 58085666 58085838 -45409136 + MIRm SINE MIR 10 192 -76 1 1028 618 276 70 49 chr15 58086843 58087087 -45407887 - B4A SINE B4 -42 250 2 1 1028 801 261 124 34 chr15 58087972 58088238 -45406736 + B4A SINE B4 1 290 -2 1 1028 464 0 18 0 chr15 58088269 58088325 -45406649 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1028 455 290 130 5 chr15 58088648 58088832 -45406142 + MER63A DNA AcHobo 1 207 -3 1 1028 229 172 17 17 chr15 58089083 58089142 -45405832 + T-rich Low_complexity Low_complexity 1 59 0 1 1028 439 224 103 0 chr15 58089505 58089612 -45405362 + B3A SINE B2 1 118 -80 1 1028 923 168 136 44 chr15 58089612 58089818 -45405156 + URR1A DNA MER1_type 1 225 -1 1 1028 432 0 0 0 chr15 58089835 58089883 -45405091 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1028 451 271 100 11 chr15 58089899 58090089 -45404885 + Lx8 LINE L1 7267 7473 0 1 1028 360 0 0 0 chr15 58091007 58091047 -45403927 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 1028 1231 114 16 21 chr15 58091376 58091564 -45403410 - B2_Mm2 SINE B2 -7 188 2 1 1028 497 237 16 25 chr15 58091628 58091749 -45403225 - RSINE1 SINE B4 -41 124 5 1 1028 423 0 0 0 chr15 58092917 58092964 -45402010 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1028 434 253 174 10 chr15 58092992 58093188 -45401786 - L1MA4A LINE L1 -373 5930 5703 1 1028 295 222 143 36 chr15 58093188 58093225 -45401749 - L1_Rod LINE L1 -268 5579 5530 1 1028 414 0 0 0 chr15 58093225 58093271 -45401703 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 1 1028 349 206 22 22 chr15 58093271 58093363 -45401611 - L1MA4A LINE L1 -714 5589 5498 1 1028 402 284 0 0 chr15 58094725 58094827 -45400147 - RSINE1 SINE B4 -61 104 3 1 1028 495 0 0 0 chr15 58095086 58095141 -45399833 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 1028 1077 85 0 14 chr15 58095142 58095285 -45399689 - B1_Mus1 SINE Alu -6 142 2 1 1028 2155 105 9 69 chr15 58096290 58096639 -45398335 + ORR1A4 LTR MaLR 1 328 -1 1 1028 30 27 0 0 chr15 58096723 58096760 -45398214 + AT_rich Low_complexity Low_complexity 1 37 0 1 1028 1235 158 9 5 chr15 58096762 58096978 -45397996 - Lx4A LINE L1 -9 7049 6833 1 1028 369 0 0 0 chr15 58097564 58097605 -45397369 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1028 3194 68 5 0 chr15 58098372 58098770 -45396204 + MTB LTR MaLR 1 400 0 1 1028 21 0 0 0 chr15 58098775 58098796 -45396178 + AT_rich Low_complexity Low_complexity 1 21 0 1 1028 467 259 83 34 chr15 58099274 58099478 -45395496 + B4A SINE B4 3 216 -76 1 1028 279 0 0 0 chr15 58099479 58099510 -45395464 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1028 562 278 8 122 chr15 58099541 58099779 -45395195 + B3A SINE B2 6 216 0 2 1028 600 272 25 19 chr15 58100106 58100267 -45394707 + RSINE1 SINE B4 4 165 0 2 1028 573 267 7 32 chr15 58100914 58101069 -45393905 + B3A SINE B2 2 152 -46 2 1028 351 0 0 0 chr15 58101070 58101109 -45393865 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1028 209 405 0 0 chr15 58101395 58101573 -45393401 + G-rich Low_complexity Low_complexity 1 178 0 2 1028 225 122 41 0 chr15 58101834 58101883 -45393091 - Lx9 LINE L1 -1 7643 7593 2 1028 1163 68 7 0 chr15 58101928 58102074 -45392900 + B1_Mus2 SINE Alu 1 147 0 2 1028 279 322 144 21 chr15 58102346 58102533 -45392441 - L1M5 LINE L1 -302 5822 5613 2 1028 201 74 0 0 chr15 58103967 58103994 -45390980 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2 1028 453 36 0 0 chr15 58104777 58104832 -45390142 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1028 387 0 0 0 chr15 58104832 58104874 -45390100 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 1028 281 344 39 15 chr15 58104917 58105047 -45389927 - MLT2D LTR ERVL -107 307 175 2 1028 313 286 98 39 chr15 58105047 58105200 -45389774 + RSINE1 SINE B4 2 163 -2 2 1028 230 283 92 28 chr15 58106046 58106155 -45388819 - MLT1J LTR MaLR -287 225 110 2 1028 209 264 71 54 chr15 58106290 58106402 -45388572 - MIR SINE MIR -65 203 83 2 1028 431 255 0 54 chr15 58106674 58106786 -45388188 - PB1D10 SINE Alu 0 117 12 2 1028 698 52 0 10 chr15 58106928 58107025 -45387949 + B1_Mm SINE Alu 52 147 0 2 1028 219 108 30 30 chr15 58107034 58107101 -45387873 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 2 1028 834 172 0 0 chr15 58107239 58107396 -45387578 + (TCTA)n Simple_repeat Simple_repeat 1 157 0 2 1028 2618 291 74 14 chr15 58107401 58108308 -45386666 - Lx8 LINE L1 -150 7323 6363 2 1028 186 371 42 14 chr15 58108402 58108544 -45386430 - MIR SINE MIR -30 232 87 2 1028 444 104 0 0 chr15 58109045 58109112 -45385862 + (TG)n Simple_repeat Simple_repeat 1 67 0 2 1028 791 268 50 32 chr15 58109117 58109337 -45385637 - B4A SINE B4 -8 284 61 2 1028 958 157 7 0 chr15 58109378 58109525 -45385449 - B1_Mur3 SINE Alu 0 149 2 2 1028 338 240 20 0 chr15 58109552 58109652 -45385322 + MLT2B3 LTR ERVL 2 103 -451 2 1028 299 301 88 14 chr15 58109930 58110078 -45384896 - L1M5 LINE L1 -513 5727 5569 2 1028 327 348 95 83 chr15 58110247 58110429 -45384545 + L2a LINE L2 2176 2359 -1060 2 1028 1243 188 164 149 chr15 58110429 58110954 -45384020 + MT2A LTR ERVL 1 533 0 2 1028 327 348 95 83 chr15 58110954 58111161 -45383813 + L2a LINE L2 2360 2554 -865 2 1028 1277 106 28 0 chr15 58111161 58111341 -45383633 + B2_Mm1t SINE B2 1 185 -8 2 1028 372 339 111 108 chr15 58111341 58111831 -45383143 + L2a LINE L2 2564 3067 -352 2 1028 345 301 158 20 chr15 58111992 58112138 -45382836 + L2a LINE L2 3261 3426 0 2 1028 416 310 107 40 chr15 58112184 58112460 -45382514 + ORR1E LTR MaLR 3 289 -81 2 1028 227 240 40 13 chr15 58113310 58113379 -45381595 + CT-rich Low_complexity Low_complexity 10 80 0 2 1028 552 68 0 0 chr15 58113379 58113452 -45381522 + (TCCC)n Simple_repeat Simple_repeat 4 76 0 2 1028 367 311 29 10 chr15 58113571 58113675 -45381299 - B1F SINE Alu -23 126 21 2 1028 333 0 0 0 chr15 58114344 58114381 -45380593 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1028 189 274 21 10 chr15 58116228 58116324 -45378650 + G-rich Low_complexity Low_complexity 5 101 0 2 1028 1193 75 0 0 chr15 58117156 58117302 -45377672 - B1_Mm SINE Alu -1 146 1 2 1028 445 265 39 69 chr15 58117324 58117527 -45377447 - B3A SINE B2 0 198 2 2 1028 688 258 19 8 chr15 58117886 58118054 -45376920 + ID_B1 SINE B4 56 224 -68 2 1028 215 366 20 10 chr15 58118493 58118595 -45376379 - MER5B DNA MER1_type -2 176 74 2 1028 304 195 122 0 chr15 58119257 58119339 -45375635 - L1MC4 LINE L1 -135 7907 7816 2 1028 203 175 25 0 chr15 58119389 58119429 -45375545 + G-rich Low_complexity Low_complexity 1 41 0 2 1028 915 98 7 15 chr15 58119896 58120031 -45374943 - URR1A DNA MER1_type -12 214 81 2 1028 310 291 60 7 chr15 58120312 58120461 -45374513 - L1MC4 LINE L1 0 8042 7886 2 1028 305 212 176 0 chr15 58120517 58120602 -45374372 - MER89 LTR ERV1 -7 552 453 2 1028 505 274 47 129 chr15 58120662 58120704 -45374270 - MER89 LTR ERV1 -267 292 254 2 1028 3241 50 2 15 chr15 58120704 58121109 -45373865 - MTB LTR MaLR 0 400 1 2 1028 505 274 47 129 chr15 58121109 58121384 -45373590 - MER89 LTR ERV1 -306 253 1 2 1028 599 267 96 89 chr15 58121656 58121716 -45373258 - B4A SINE B4 -10 282 229 2 1028 587 39 13 0 chr15 58121716 58121794 -45373180 + (TCTA)n Simple_repeat Simple_repeat 1 79 0 2 1028 599 267 96 89 chr15 58121794 58122013 -45372961 - B4A SINE B4 -64 228 2 2 1028 432 0 0 0 chr15 58122632 58122680 -45372294 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1028 252 301 154 24 chr15 58122859 58123067 -45371907 + MIR SINE MIR 18 252 -10 2 1028 184 230 0 33 chr15 58123567 58123657 -45371317 + CT-rich Low_complexity Low_complexity 1 87 0 2 1028 27 62 0 0 chr15 58124112 58124160 -45370814 + AT_rich Low_complexity Low_complexity 1 48 0 2 1028 501 17 0 0 chr15 58124888 58124946 -45370028 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1028 462 295 79 58 chr15 58125231 58125507 -45369467 - MLT1G1 LTR MaLR -25 530 265 2 1028 474 290 185 11 chr15 58125564 58125745 -45369229 + MER58A DNA MER1_type 8 220 -4 2 1028 1894 283 50 89 chr15 58126382 58126605 -45368369 + L1MA5 LINE L1 5121 5345 -955 2 1028 653 66 11 0 chr15 58126605 58126696 -45368278 + (TTTTC)n Simple_repeat Simple_repeat 4 95 0 2 1028 1072 76 0 0 chr15 58126702 58126834 -45368140 - B1_Mus1 SINE Alu -16 132 1 2 1028 1894 281 53 80 chr15 58126834 58127796 -45367178 + L1MA5 LINE L1 5346 6293 -7 2 1028 256 297 22 0 chr15 58127982 58128073 -45366901 + L1M5 LINE L1 5542 5634 -490 2 1028 509 357 19 14 chr15 58128670 58128883 -45366091 + MLT1F LTR MaLR 56 269 -279 2 1028 2269 105 6 39 chr15 58129436 58129774 -45365200 - ORR1A2 LTR MaLR 0 327 1 2 1028 1544 177 188 10 chr15 58130166 58130480 -45364494 + ORR1D1 LTR MaLR 5 374 0 2 1028 794 257 5 16 chr15 58130670 58130860 -45364114 - B3A SINE B2 -10 188 1 2 1028 2692 117 5 41 chr15 58131016 58131435 -45363539 + MTB_Mm LTR MaLR 4 407 0 2 1028 185 296 35 58 chr15 58131437 58131523 -45363451 - L2c LINE L2 -275 3112 3029 2 1028 407 308 42 33 chr15 58131687 58131902 -45363072 + L1ME3A LINE L1 5483 5699 -474 2 1028 1203 48 14 0 chr15 58131932 58132077 -45362897 + B1_Mus2 SINE Alu 1 147 0 2 1028 210 91 0 0 chr15 58132077 58132110 -45362864 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1028 333 262 21 119 chr15 58132222 58132314 -45362660 + L1ME3A LINE L1 5960 6039 -134 2 1028 1613 156 141 33 chr15 58132314 58132711 -45362263 - RMER10A LTR ERVL -2 440 1 2 1028 333 262 21 119 chr15 58132711 58132761 -45362213 + L1ME3A LINE L1 6040 6088 -85 2 1028 2090 182 39 11 chr15 58133901 58134263 -45360711 - ORR1D1 LTR MaLR -2 372 1 2 1028 641 319 91 97 chr15 58134324 58134821 -45360153 + RLTR11A2 LTR ERVK 7 500 -27 2 1028 719 250 0 0 chr15 58134986 58135126 -45359848 - B1F SINE Alu 0 149 10 2 1028 255 308 69 101 chr15 58134989 58135148 -45359826 - B4A SINE B4 -68 224 71 2 1028 345 153 0 0 chr15 58135672 58135744 -45359230 + (TG)n Simple_repeat Simple_repeat 2 73 0 2 1028 351 302 95 36 chr15 58135744 58135912 -45359062 - MLT1C LTR MaLR -7 460 283 2 1028 618 254 28 7 chr15 58136069 58136212 -45358762 - B4A SINE B4 0 292 147 2 1028 1427 226 152 83 chr15 58136212 58136646 -45358328 + MT2A LTR ERVL 1 464 -69 2 1028 303 337 71 0 chr15 58136655 58136753 -45358221 - B4A SINE B4 -140 152 48 2 1028 534 297 24 58 chr15 58136823 58137119 -45357855 - ORR1E LTR MaLR -1 378 1 2 1028 489 99 0 0 chr15 58137394 58137475 -45357499 + (TG)n Simple_repeat Simple_repeat 2 82 0 2 1028 180 77 0 0 chr15 58138481 58138507 -45356467 + (TTTTA)n Simple_repeat Simple_repeat 5 30 0 2 1028 468 77 0 0 chr15 58138507 58138572 -45356402 + (TATG)n Simple_repeat Simple_repeat 2 66 0 2 1028 339 25 0 0 chr15 58138600 58138640 -45356334 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 2 1028 207 264 19 0 chr15 58138643 58138696 -45356278 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 1028 326 280 53 0 chr15 58138697 58138772 -45356202 - RSINE1 SINE B4 -84 81 3 2 1028 1247 112 39 0 chr15 58139044 58139223 -45355751 + B2_Mm2 SINE B2 2 187 -8 2 1028 203 295 104 44 chr15 58140153 58140288 -45354686 - MIRc SINE MIR -121 147 5 2 1028 343 216 0 13 chr15 58140588 58140663 -45354311 - B3 SINE B2 0 216 143 2 1028 507 148 297 25 chr15 58140668 58140786 -45354188 + B1_Mur4 SINE Alu 1 150 0 2 1028 1151 249 17 66 chr15 58141105 58141388 -45353586 + B4 SINE B4 7 276 -16 2 1028 498 46 0 0 chr15 58141388 58141453 -45353521 + (TC)n Simple_repeat Simple_repeat 1 65 0 2 1028 1151 249 17 66 chr15 58141453 58141470 -45353504 + B4 SINE B4 277 292 0 2 1028 2401 156 39 12 chr15 58141803 58142213 -45352761 - MTC LTR MaLR 0 421 1 2 1028 1056 164 109 0 chr15 58142312 58142513 -45352461 - URR1A DNA MER1_type -3 223 1 2 1028 1185 154 5 37 chr15 58143031 58143246 -45351728 + RLTR11A LTR ERVK 293 500 -28 2 1028 202 262 0 0 chr15 58143489 58143531 -45351443 + G-rich Low_complexity Low_complexity 3 44 0 2 1028 210 143 0 0 chr15 58144149 58144184 -45350790 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1028 326 225 61 24 chr15 58144212 58144294 -45350680 - B3 SINE B2 -5 211 127 2 1028 828 268 44 0 chr15 58144658 58144863 -45350111 + ID_B1 SINE B4 5 218 -6 2 1028 1145 39 383 0 chr15 58145630 58145886 -45349088 + IAPEY2_LTR LTR ERVK 1 354 -3 2 1028 186 118 0 0 chr15 58146067 58146101 -45348873 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1028 415 331 17 58 chr15 58147083 58147256 -45347718 - MIR SINE MIR -93 169 4 2 1028 615 252 0 80 chr15 58147347 58147498 -45347476 - B1F SINE Alu -2 147 9 3 1028 412 308 0 55 chr15 58147386 58147513 -45347461 - ID_B1 SINE B4 -26 198 79 3 1028 261 0 0 0 chr15 58147978 58148007 -45346967 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 1028 444 293 60 0 chr15 58148014 58148147 -45346827 - RSINE1 SINE B4 -22 143 3 3 1028 866 113 7 0 chr15 58148563 58148705 -45346269 + (GGA)n Simple_repeat Simple_repeat 2 144 0 3 1028 1368 67 0 0 chr15 58148705 58148885 -45346089 + (GAA)n Simple_repeat Simple_repeat 1 180 0 3 1028 390 21 0 0 chr15 58149210 58149257 -45345717 + (TATG)n Simple_repeat Simple_repeat 4 50 0 3 1028 797 178 68 7 chr15 58149264 58149411 -45345563 + ID_B1 SINE B4 68 223 -1 3 1028 777 269 12 6 chr15 58149508 58149680 -45345294 + B3 SINE B2 33 205 -11 3 1028 289 250 140 65 chr15 58149738 58149845 -45345129 - MIR SINE MIR -142 120 6 3 1028 494 119 0 23 chr15 58149933 58150019 -45344955 + ID_B1 SINE B4 126 209 -15 3 1028 291 304 19 47 chr15 58150019 58150126 -45344848 - RSINE1 SINE B4 -61 104 1 3 1028 231 202 147 29 chr15 58151273 58151375 -45343599 + MamRep1879 DNA hAT? 9 122 -94 3 1028 888 118 0 0 chr15 58151467 58151603 -45343371 + (TTTC)n Simple_repeat Simple_repeat 4 139 0 3 1028 228 360 26 17 chr15 58152208 58152324 -45342650 - MER5A DNA MER1_type -5 184 68 3 1028 404 356 6 11 chr15 58152561 58152740 -45342234 + (TATG)n Simple_repeat Simple_repeat 2 179 0 3 1028 458 322 6 6 chr15 58152829 58153007 -45341967 + (TA)n Simple_repeat Simple_repeat 1 178 0 3 1028 210 196 35 48 chr15 58153034 58153179 -45341795 + (TATG)n Simple_repeat Simple_repeat 2 144 0 3 1028 220 237 0 31 chr15 58153246 58153342 -45341632 + (TATG)n Simple_repeat Simple_repeat 4 96 0 3 1028 244 301 59 42 chr15 58153363 58153481 -45341493 + RMER12 LTR ERVK 737 856 -466 3 1028 467 33 16 0 chr15 58156187 58156248 -45338726 + (CTTG)n Simple_repeat Simple_repeat 2 63 0 3 1028 435 106 0 0 chr15 58156331 58156397 -45338577 + (TCCC)n Simple_repeat Simple_repeat 4 69 0 3 1028 302 310 287 7 chr15 58156608 58156894 -45338080 + HAL1-3A_ME LINE L1 2074 2439 -419 3 1028 1832 112 10 72 chr15 58158071 58158378 -45336596 - ORR1A3 LTR MaLR -38 288 1 3 1028 261 0 0 0 chr15 58158913 58158942 -45336032 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1028 279 0 0 0 chr15 58158942 58158972 -45336002 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 1028 285 344 36 42 chr15 58159138 58159305 -45335669 + MIRc SINE MIR 3 168 -100 3 1028 239 326 54 0 chr15 58159511 58159603 -45335371 + MIR SINE MIR 40 136 -72 3 1028 228 316 53 0 chr15 58160351 58160427 -45334547 + MER2 DNA MER2_type 207 286 -59 3 1028 384 22 0 0 chr15 58161170 58161215 -45333759 + (TCCA)n Simple_repeat Simple_repeat 1 45 0 3 1028 1236 45 0 0 chr15 58161418 58161573 -45333401 + (TTTC)n Simple_repeat Simple_repeat 4 158 0 3 1028 696 40 30 0 chr15 58161575 58161675 -45333299 + (TCTA)n Simple_repeat Simple_repeat 1 103 0 3 1028 208 200 20 20 chr15 58162189 58162240 -45332734 + (TATG)n Simple_repeat Simple_repeat 4 54 0 3 1028 563 282 47 93 chr15 58162245 58162460 -45332514 - B4A SINE B4 0 292 88 3 1028 411 260 62 0 chr15 58162499 58162595 -45332379 - B4A SINE B4 -46 246 145 3 1028 225 0 0 0 chr15 58162675 58162700 -45332274 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 1028 252 0 0 0 chr15 58162700 58162727 -45332247 + (GA)n Simple_repeat Simple_repeat 1 28 0 3 1028 306 214 27 67 chr15 58165888 58165963 -45329011 - ORR1E LTR MaLR 0 359 288 3 1028 198 0 0 0 chr15 58165965 58165987 -45328987 + (GA)n Simple_repeat Simple_repeat 1 22 0 3 1028 628 239 30 18 chr15 58165987 58166153 -45328821 - ORR1E LTR MaLR -184 175 8 3 1028 256 325 54 93 chr15 58167030 58167112 -45327862 + B4 SINE B4 2 73 -219 3 1028 624 27 0 0 chr15 58167112 58167186 -45327788 + (CA)n Simple_repeat Simple_repeat 1 74 0 3 1028 463 284 301 57 chr15 58167186 58167356 -45327618 + B4 SINE B4 74 292 0 3 1028 1082 266 84 34 chr15 58167888 58168246 -45326728 - MTEa LTR MaLR 0 379 4 3 1028 444 37 0 0 chr15 58168267 58168321 -45326653 + (TCCCC)n Simple_repeat Simple_repeat 4 57 0 3 1028 3101 73 111 45 chr15 58171077 58171564 -45323410 - MURVY-LTR LTR ERV1 0 519 1 3 1028 961 288 76 10 chr15 58171872 58172160 -45322814 - Lx8 LINE L1 -273 7200 6894 3 1028 811 180 28 5 chr15 58173827 58174020 -45320954 - B3 SINE B2 -1 197 15 3 1028 250 286 104 9 chr15 58174023 58174129 -45320845 - MER58B DNA MER1_type -183 158 43 3 1028 939 199 54 39 chr15 58174230 58174434 -45320540 + B3 SINE B2 1 207 -9 3 1028 309 200 15 15 chr15 58174653 58174719 -45320255 + L1MDa LINE L1 2445 2510 -4123 3 1028 401 303 52 105 chr15 58175775 58175985 -45318989 + MER106B DNA MER1_type 902 1055 -4 3 1028 423 209 21 62 chr15 58177466 58177563 -45317411 - PB1D7 SINE Alu -4 116 24 3 1028 183 182 0 0 chr15 58179491 58179524 -45315450 + L2a LINE L2 3117 3149 -277 3 1028 477 0 0 0 chr15 58180162 58180215 -45314759 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1028 377 189 2 14 chr15 58180530 58180614 -45314360 + ORR1D2 LTR MaLR 296 379 0 3 1028 860 236 49 12 chr15 58180614 58180859 -45314115 + L1MA6 LINE L1 6044 6297 -3 3 1028 184 369 45 15 chr15 58181108 58181174 -45313800 - L4 LINE RTE -791 1238 1171 3 1028 392 317 79 15 chr15 58181287 58181489 -45313485 + RMER15 LTR ERVL 346 560 -15 3 1028 286 271 14 0 chr15 58182368 58182438 -45312536 + ID4 SINE ID 1 71 -12 3 1028 1640 222 128 57 chr15 58182438 58182978 -45311996 + RLTR20A2 LTR ERVK 1 578 0 3 1028 1215 226 5 0 chr15 58183407 58183628 -45311346 + ID_B1 SINE B4 2 223 -1 3 1028 225 0 0 0 chr15 58184707 58184732 -45310242 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1028 203 283 140 9 chr15 58184876 58184983 -45309991 + MIR SINE MIR 132 252 -10 3 1028 193 281 18 0 chr15 58185392 58185449 -45309525 + MIRc SINE MIR 41 98 -170 3 1028 332 94 19 0 chr15 58185525 58185578 -45309396 + (TTTTC)n Simple_repeat Simple_repeat 2 55 0 3 1028 487 169 46 17 chr15 58185907 58186082 -45308892 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1028 317 268 24 30 chr15 58186626 58186731 -45308243 + PB1D10 SINE Alu 12 115 -2 3 1028 1317 176 30 54 chr15 58186909 58187120 -45307854 + Lx9 LINE L1 7321 7517 -127 3 1028 371 56 19 0 chr15 58187120 58187174 -45307800 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 1028 315 0 0 0 chr15 58187174 58187209 -45307765 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1028 1317 176 30 54 chr15 58187209 58187327 -45307647 + Lx9 LINE L1 7518 7642 -2 3 1028 652 278 77 21 chr15 58188106 58188393 -45306581 + L1MB8 LINE L1 5681 5983 -195 3 1028 225 238 0 0 chr15 58188444 58188486 -45306488 + 5S rRNA rRNA 1 42 -79 3 1028 396 234 43 0 chr15 58188491 58188585 -45306389 + L1MB8 LINE L1 6065 6162 -16 3 1028 620 59 0 12 chr15 58188676 58188762 -45306212 + (TCCC)n Simple_repeat Simple_repeat 4 88 0 3 1028 271 316 16 47 chr15 58190530 58190664 -45304310 + MLT1C LTR MaLR 327 480 -25 3 1028 236 273 26 13 chr15 58192445 58192523 -45302451 - MLT1D LTR MaLR -32 358 280 3 1028 1061 126 32 0 chr15 58192617 58192795 -45302179 - B2_Mm2 SINE B2 0 193 2 3 1028 427 261 23 63 chr15 58192795 58192956 -45302018 - MLT1D LTR MaLR -309 196 41 3 1028 335 252 41 65 chr15 58193795 58193965 -45301009 + Charlie5 DNA MER1_type 2415 2580 -44 3 1028 524 240 108 0 chr15 58193966 58194095 -45300879 + ID_B1 SINE B4 79 221 -3 3 1028 410 256 0 0 chr15 58194097 58194183 -45300791 + B4A SINE B4 2 87 -205 3 1028 485 236 104 0 chr15 58194324 58194430 -45300544 + PB1D7 SINE Alu 1 117 -3 3 1028 192 143 68 45 chr15 58194876 58194920 -45300054 + L2b LINE L2 3330 3374 -1 3 1028 180 0 0 0 chr15 58194928 58194948 -45300026 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 3 1029 270 81 0 0 chr15 58196329 58196366 -45298608 + (TAA)n Simple_repeat Simple_repeat 1 37 0 3 1029 1390 87 16 16 chr15 58196440 58196628 -45298346 + B2_Mm2 SINE B2 2 189 -6 3 1029 251 179 59 12 chr15 58197198 58197283 -45297691 + GA-rich Low_complexity Low_complexity 2 90 0 3 1029 308 111 0 18 chr15 58197284 58197339 -45297635 + (GGA)n Simple_repeat Simple_repeat 3 56 0 3 1029 546 222 135 43 chr15 58197675 58197816 -45297158 - RSINE1 SINE B4 -8 157 4 3 1029 256 294 29 0 chr15 58198167 58198235 -45296739 - MER45R DNA Tip100 -1486 95 26 3 1029 325 310 66 94 chr15 58198253 58198479 -45296495 - B4 SINE B4 0 292 74 3 1029 360 250 60 0 chr15 58198479 58198563 -45296411 + ORR1C2 LTR MaLR 1 89 -289 3 1029 907 109 36 0 chr15 58198567 58198704 -45296270 + B1_Mus1 SINE Alu 7 148 0 3 1029 239 133 0 22 chr15 58198718 58198764 -45296210 + GA-rich Low_complexity Low_complexity 3 47 0 3 1029 462 18 0 0 chr15 58198768 58198823 -45296151 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 1029 1508 146 100 4 chr15 58198823 58199092 -45295882 + ORR1C2 LTR MaLR 89 383 -1 3 1029 228 67 0 0 chr15 58199329 58199359 -45295615 + (GGGAGA)n Simple_repeat Simple_repeat 5 34 0 3 1029 531 268 31 16 chr15 58200171 58200300 -45294674 - ID_B1 SINE B4 -7 217 87 3 1029 982 231 5 0 chr15 58200682 58200868 -45294106 + B3 SINE B2 2 188 -28 3 1029 237 229 42 14 chr15 58200913 58200984 -45293990 + GA-rich Low_complexity Low_complexity 1 73 0 3 1029 607 210 0 40 chr15 58201085 58201209 -45293765 - B1F SINE Alu -1 148 30 3 1029 221 0 0 33 chr15 58201338 58201368 -45293606 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 1029 1034 79 50 0 chr15 58201384 58201524 -45293450 - B1_Mus1 SINE Alu 0 148 2 3 1029 7728 76 71 15 chr15 58202001 58203083 -45291891 + Lx3B LINE L1 5830 6972 -1 3 1029 783 309 57 36 chr15 58203387 58203864 -45291110 - L1MA10 LINE L1 -58 6276 5790 4 1029 1453 78 0 15 chr15 58204036 58204231 -45290743 + B2_Mm2 SINE B2 2 193 -2 4 1029 617 259 86 6 chr15 58204419 58204582 -45290392 + B4 SINE B4 2 177 -115 4 1029 1694 31 0 0 chr15 58204621 58204814 -45290160 + B2_Mm1a SINE B2 1 193 0 4 1029 243 103 0 0 chr15 58204926 58204965 -45290009 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1029 305 372 87 6 chr15 58205126 58205326 -45289648 - MIRb SINE MIR -25 243 13 4 1029 540 0 0 0 chr15 58205868 58205928 -45289046 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1029 321 26 0 0 chr15 58205928 58205965 -45289009 + (GA)n Simple_repeat Simple_repeat 1 38 0 4 1029 225 0 0 0 chr15 58206252 58206277 -45288697 + (TTTTTG)n Simple_repeat Simple_repeat 5 29 0 4 1029 774 50 0 0 chr15 58206277 58206376 -45288598 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 4 1029 244 250 16 16 chr15 58206599 58206660 -45288314 + MER63D DNA AcHobo 274 334 -727 4 1029 235 391 29 14 chr15 58206735 58206875 -45288099 + L2c LINE L2 3208 3349 -38 4 1029 310 331 52 52 chr15 58207373 58207545 -45287429 + MER5B DNA MER1_type 2 173 -5 4 1029 538 282 13 78 chr15 58207792 58207946 -45287028 + RSINE1 SINE B4 4 147 -18 4 1029 226 294 11 105 chr15 58207937 58207952 -45287022 + MER113 DNA MER1_type 58 72 -449 4 1029 369 0 0 0 chr15 58207952 58207993 -45286981 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1029 226 294 11 105 chr15 58207993 58208072 -45286902 + MER113 DNA MER1_type 73 142 -379 4 1029 239 337 102 0 chr15 58208148 58208246 -45286728 + MER58A DNA MER1_type 39 146 -78 4 1029 582 323 96 45 chr15 58208316 58208608 -45286366 + MER113 DNA MER1_type 208 514 -7 4 1029 327 330 64 0 chr15 58209454 58209563 -45285411 + B4A SINE B4 177 292 0 4 1029 774 163 16 0 chr15 58209759 58209888 -45285086 - B1_Mus2 SINE Alu 0 147 17 4 1029 373 277 32 0 chr15 58210552 58210646 -45284328 + MER20 DNA MER1_type 110 206 -13 4 1029 1402 134 4 63 chr15 58211099 58211187 -45283787 - URR1B DNA MER1_type 0 225 150 4 1029 1348 93 16 0 chr15 58211187 58211370 -45283604 + B2_Mm2 SINE B2 1 186 -9 4 1029 1402 134 4 63 chr15 58211370 58211520 -45283454 - URR1B DNA MER1_type -76 149 1 4 1029 459 0 0 0 chr15 58211879 58211930 -45283044 + (TATG)n Simple_repeat Simple_repeat 2 52 0 4 1029 668 287 76 40 chr15 58212487 58212763 -45282211 + MER2 DNA MER2_type 9 294 -51 4 1029 438 148 0 0 chr15 58212774 58212875 -45282099 + (TC)n Simple_repeat Simple_repeat 2 102 0 4 1029 231 114 0 0 chr15 58212876 58212911 -45282063 + (TATG)n Simple_repeat Simple_repeat 4 38 0 4 1029 2176 88 26 65 chr15 58213325 58213665 -45281309 + ORR1A2 LTR MaLR 1 327 0 4 1029 1009 237 127 18 chr15 58213665 58213940 -45281034 + ORR1D2 LTR MaLR 66 370 0 4 1029 1312 196 0 9 chr15 58214099 58214321 -45280653 - URR1A DNA MER1_type 0 226 7 4 1029 495 0 0 0 chr15 58214559 58214614 -45280360 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1029 697 265 78 9 chr15 58214633 58214850 -45280124 - B4A SINE B4 -60 232 1 4 1029 536 268 21 21 chr15 58216055 58216200 -45278774 + MER5B DNA MER1_type 29 173 -5 4 1029 956 239 82 70 chr15 58216343 58216396 -45278578 - B4A SINE B4 -19 273 229 4 1029 852 177 0 20 chr15 58216396 58216546 -45278428 - B1_Mur1 SINE Alu -1 148 2 4 1029 956 239 82 70 chr15 58216546 58216748 -45278226 - B4A SINE B4 -64 228 15 4 1029 1097 116 6 0 chr15 58217218 58217391 -45277583 + (GGAA)n Simple_repeat Simple_repeat 1 174 0 4 1029 477 255 97 28 chr15 58217404 58217549 -45277425 + RSINE1 SINE B4 1 155 -10 4 1029 854 157 6 0 chr15 58217931 58218090 -45276884 + GA-rich Low_complexity Low_complexity 1 160 0 4 1029 207 0 0 0 chr15 58218537 58218560 -45276414 + (TGGGGG)n Simple_repeat Simple_repeat 1 23 0 4 1029 261 0 0 0 chr15 58218629 58218658 -45276316 + (TGGGGG)n Simple_repeat Simple_repeat 1 29 0 4 1029 1071 51 65 0 chr15 58218710 58218848 -45276126 - B1_Mus2 SINE Alu 0 147 1 4 1029 306 0 0 0 chr15 58218908 58218942 -45276032 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1029 655 46 18 27 chr15 58218960 58219071 -45275903 + (GAGAA)n Simple_repeat Simple_repeat 5 114 0 4 1029 940 17 17 0 chr15 58219251 58219369 -45275605 + (GGA)n Simple_repeat Simple_repeat 2 121 0 4 1029 255 125 0 0 chr15 58219383 58219423 -45275551 + (GGGAGA)n Simple_repeat Simple_repeat 1 40 0 4 1029 638 249 67 8 chr15 58219938 58220177 -45274797 + L1MB1 LINE L1 5914 6166 -2 4 1029 315 368 9 0 chr15 58221144 58221250 -45273724 - PB1D7 SINE Alu -12 108 2 4 1029 548 256 78 13 chr15 58221311 58221465 -45273509 - RSINE1 SINE B4 0 165 2 4 1029 414 0 0 0 chr15 58221467 58221513 -45273461 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1029 765 182 8 0 chr15 58221535 58221661 -45273313 + B1_Mur1 SINE Alu 15 141 -8 4 1029 1458 89 0 5 chr15 58221785 58221978 -45272996 - B2_Mm2 SINE B2 -3 192 1 4 1029 225 0 0 0 chr15 58222017 58222042 -45272932 + (TAA)n Simple_repeat Simple_repeat 2 26 0 4 1029 201 106 62 21 chr15 58222868 58222916 -45272058 + T-rich Low_complexity Low_complexity 1 50 0 4 1029 276 259 40 79 chr15 58223146 58223272 -45271702 - B1F SINE Alu -2 147 27 4 1029 1019 46 114 0 chr15 58223301 58223432 -45271542 + B1_Mus1 SINE Alu 2 147 -1 4 1029 977 216 41 10 chr15 58223498 58223694 -45271280 - B3 SINE B2 -10 206 5 4 1029 199 292 142 58 chr15 58223707 58223827 -45271147 + L2b LINE L2 3272 3401 -25 4 1029 389 241 152 0 chr15 58223955 58224067 -45270907 + ID_B1 SINE B4 86 214 -10 4 1029 270 0 0 0 chr15 58224067 58224097 -45270877 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 1029 21 0 0 0 chr15 58224284 58224305 -45270669 + AT_rich Low_complexity Low_complexity 1 21 0 4 1029 342 0 0 0 chr15 58225713 58225751 -45269223 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1029 25 0 0 0 chr15 58225871 58225896 -45269078 + AT_rich Low_complexity Low_complexity 1 25 0 4 1029 670 307 135 36 chr15 58225921 58226372 -45268602 + RMER5 LTR ERV1 39 534 0 4 1029 324 317 75 42 chr15 58227563 58227923 -45267051 + L2a LINE L2 2819 3189 -237 4 1029 1475 64 0 11 chr15 58228027 58228216 -45266758 - B2_Mm2 SINE B2 -7 188 2 4 1029 256 220 0 63 chr15 58228235 58228298 -45266676 - ID4_ SINE ID -9 74 16 4 1029 2205 119 19 0 chr15 58228740 58229060 -45265914 + ORR1A3 LTR MaLR 1 326 0 4 1029 232 337 74 0 chr15 58229235 58229330 -45265644 + L2a LINE L2 3244 3345 -30 4 1029 2294 129 105 29 chr15 58229703 58230151 -45264823 + RLTR19 LTR ERVK 15 496 -3 4 1029 331 194 70 16 chr15 58230676 58230770 -45264204 + PB1D10 SINE Alu 1 104 -23 4 1029 271 184 176 46 chr15 58230777 58230885 -45264089 - MLT1K LTR MaLR -9 586 465 4 1029 186 341 66 50 chr15 58231085 58231267 -45263707 - L2 LINE L2 -832 2587 2403 4 1029 31 58 0 0 chr15 58231571 58231623 -45263351 + AT_rich Low_complexity Low_complexity 1 52 0 4 1029 2212 182 68 24 chr15 58231705 58232201 -45262773 + RLTR11A LTR ERVK 11 528 0 4 1029 310 283 17 17 chr15 58233577 58233692 -45261282 + (TATG)n Simple_repeat Simple_repeat 2 116 0 4 1029 488 323 41 51 chr15 58233693 58233987 -45260987 - B4A SINE B4 0 292 2 4 1029 600 339 28 16 chr15 58234001 58234319 -45260655 - L1MA9 LINE L1 -38 6274 5953 4 1029 707 263 16 82 chr15 58234385 58234642 -45260332 + B4A SINE B4 53 292 0 4 1029 2373 149 84 60 chr15 58234814 58235045 -45259929 + RLTR11A LTR ERVK 1 257 -271 4 1029 198 0 0 0 chr15 58235045 58235067 -45259907 + (TGG)n Simple_repeat Simple_repeat 2 23 0 4 1029 2373 149 84 60 chr15 58235067 58235348 -45259626 + RLTR11A LTR ERVK 258 524 -4 4 1029 321 26 0 0 chr15 58235592 58235630 -45259344 + (CAGA)n Simple_repeat Simple_repeat 2 39 0 4 1029 226 311 86 99 chr15 58236113 58236334 -45258640 + LTR16E2 LTR ERVL 275 492 -76 4 1029 207 0 0 0 chr15 58236394 58236417 -45258557 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1029 492 238 41 20 chr15 58236658 58236802 -45258172 + B4 SINE B4 84 230 -62 4 1029 226 297 94 0 chr15 58236802 58236866 -45258108 + B3A SINE B2 3 72 -126 4 1029 292 317 70 10 chr15 58236879 58237065 -45257909 - MIR SINE MIR -45 223 30 4 1029 369 364 0 0 chr15 58237290 58237419 -45257555 - ID_B1 SINE B4 -5 219 91 4 1029 180 77 0 0 chr15 58238020 58238046 -45256928 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 1029 216 255 0 0 chr15 58238086 58238133 -45256841 + ID_B1 SINE B4 98 144 -80 4 1029 2533 87 134 2 chr15 58238182 58238576 -45256398 + L1_Mus3 LINE L1 6193 6638 0 4 1029 326 310 35 0 chr15 58238659 58238775 -45256199 - PB1D9 SINE Alu 0 120 1 4 1029 528 126 0 0 chr15 58239829 58239916 -45255058 + (TG)n Simple_repeat Simple_repeat 1 87 0 4 1029 27 29 0 0 chr15 58240223 58240257 -45254717 + AT_rich Low_complexity Low_complexity 1 34 0 4 1029 1150 63 7 0 chr15 58240388 58240531 -45254443 + B1_Mus2 SINE Alu 2 145 -2 4 1029 216 0 0 0 chr15 58240531 58240555 -45254419 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1029 229 312 18 18 chr15 58241316 58241427 -45253547 - MER5B DNA MER1_type -1 177 67 4 1029 210 71 0 0 chr15 58241464 58241492 -45253482 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1029 405 298 0 11 chr15 58241711 58241806 -45253168 + PB1D7 SINE Alu 6 99 -21 4 1029 609 221 37 0 chr15 58242475 58242611 -45252363 - B1F SINE Alu -1 148 8 4 1029 1123 95 101 0 chr15 58242717 58242886 -45252088 + B2_Mm2 SINE B2 1 186 -9 4 1029 308 246 98 11 chr15 58244183 58244371 -45250603 - MLT1D LTR MaLR 0 505 275 4 1029 254 255 75 0 chr15 58244401 58244495 -45250479 - MLT1D LTR MaLR -312 193 93 4 1029 589 256 0 0 chr15 58244692 58244817 -45250157 + ID_B1 SINE B4 81 205 -19 4 1029 365 168 130 65 chr15 58245868 58245946 -45249028 + B3 SINE B2 95 166 -50 5 1029 342 0 0 0 chr15 58245946 58245984 -45248990 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1029 365 168 130 65 chr15 58245984 58246013 -45248961 + B3 SINE B2 167 208 -8 5 1029 25 75 0 0 chr15 58247193 58247246 -45247728 + GC_rich Low_complexity Low_complexity 1 53 0 5 1029 549 271 136 39 chr15 58250857 58251114 -45243860 + MER2 DNA MER2_type 48 329 -16 5 1029 308 111 0 18 chr15 58251333 58251388 -45243586 + (CCCA)n Simple_repeat Simple_repeat 3 56 0 5 1029 25 31 0 0 chr15 58251678 58251710 -45243264 + AT_rich Low_complexity Low_complexity 1 32 0 5 1029 469 343 60 10 chr15 58252394 58252594 -45242380 + B4 SINE B4 4 213 -79 5 1029 215 291 0 0 chr15 58252829 58252884 -45242090 + AluF_3 SINE Alu 142 196 -115 5 1029 24 0 0 0 chr15 58254296 58254320 -45240654 + AT_rich Low_complexity Low_complexity 1 24 0 5 1029 590 188 36 0 chr15 58255150 58255288 -45239686 + URR1A DNA MER1_type 84 226 0 5 1029 21 0 0 0 chr15 58255654 58255675 -45239299 + AT_rich Low_complexity Low_complexity 1 21 0 5 1029 1006 280 134 20 chr15 58256577 58257076 -45237898 - RLTR20A2 LTR ERVK -19 559 4 5 1029 189 259 204 15 chr15 58257288 58257425 -45237549 - MIRb SINE MIR -9 259 97 5 1029 25 0 0 0 chr15 58258935 58258960 -45236014 + AT_rich Low_complexity Low_complexity 1 25 0 5 1029 239 283 0 0 chr15 58259658 58259711 -45235263 - Lx9 LINE L1 -458 7186 7134 5 1029 266 109 22 0 chr15 58259989 58260035 -45234939 - B3A SINE B2 -150 48 2 5 1029 1516 72 0 5 chr15 58260414 58260609 -45234365 - B2_Mm2 SINE B2 0 195 2 5 1029 342 0 0 0 chr15 58260988 58261026 -45233948 + (GA)n Simple_repeat Simple_repeat 2 39 0 5 1029 192 40 0 0 chr15 58261775 58261800 -45233174 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 5 1029 192 77 0 0 chr15 58262391 58262417 -45232557 + (TTTTTA)n Simple_repeat Simple_repeat 5 30 0 5 1029 1458 198 139 8 chr15 58263422 58263774 -45231200 - MTD LTR MaLR -14 405 8 5 1029 397 271 10 0 chr15 58263825 58263921 -45231053 + PB1D10 SINE Alu 13 109 -8 5 1029 2865 164 19 19 chr15 58265224 58265751 -45229223 - RLTR11A2 LTR ERVK 0 527 1 5 1029 1050 233 103 58 chr15 58266600 58266996 -45227978 + Lx7 LINE L1 7281 7694 -2 5 1029 594 308 35 31 chr15 58267218 58267446 -45227528 + MER92B LTR ERV1 46 274 -362 5 1029 339 98 24 24 chr15 58268113 58268197 -45226777 + (TTTTTG)n Simple_repeat Simple_repeat 5 88 0 5 1029 1179 62 7 0 chr15 58268197 58268343 -45226631 - B1_Mus2 SINE Alu 0 147 1 5 1029 252 359 58 8 chr15 58268397 58268658 -45226316 - L1MC4 LINE L1 -498 7544 7271 5 1029 312 48 0 0 chr15 58269027 58269069 -45225905 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1029 354 300 27 9 chr15 58269075 58269186 -45225788 - RSINE1 SINE B4 -21 144 32 5 1029 1153 143 38 0 chr15 58272285 58272494 -45222480 - URR1B DNA MER1_type -8 217 1 5 1029 816 189 294 33 chr15 58272760 58273066 -45221908 + Lx6 LINE L1 7070 7455 -5 5 1029 203 351 52 9 chr15 58274075 58274190 -45220784 - MIR SINE MIR -122 140 21 5 1029 240 244 0 0 chr15 58274561 58274606 -45220368 - ID4_ SINE ID -11 72 28 5 1029 434 283 71 60 chr15 58274996 58275248 -45219726 - L1MB7 LINE L1 -8 6176 5922 5 1029 32 0 0 0 chr15 58275251 58275283 -45219691 + AT_rich Low_complexity Low_complexity 1 32 0 5 1029 384 310 66 48 chr15 58275438 58275665 -45219309 + MIRb SINE MIR 4 234 -34 5 1029 275 277 75 8 chr15 58275860 58275980 -45218994 - MTE2b LTR MaLR -1 378 251 5 1029 349 280 136 0 chr15 58276035 58276160 -45218814 - MTE2b LTR MaLR -237 142 1 5 1029 259 235 185 0 chr15 58276520 58276601 -45218373 - PB1D7 SINE Alu -7 113 18 5 1029 509 250 228 47 chr15 58276620 58276963 -45218011 - MTD LTR MaLR -14 405 1 5 1029 2533 292 98 31 chr15 58277243 58278370 -45216604 - Lx8 LINE L1 -2 7471 6269 5 1029 189 0 0 0 chr15 58280891 58280912 -45214062 + (TTCA)n Simple_repeat Simple_repeat 3 23 0 5 1029 240 35 0 0 chr15 58281306 58281335 -45213639 + (TC)n Simple_repeat Simple_repeat 1 29 0 5 1029 618 162 68 0 chr15 58282541 58282658 -45212316 + B1_Mur1 SINE Alu 20 144 -5 5 1029 477 288 77 24 chr15 58283038 58283284 -45211690 - Lx8 LINE L1 -536 6937 6679 5 1029 237 312 60 60 chr15 58283323 58283473 -45211501 + Lx8 LINE L1 7037 7186 -287 5 1029 1368 185 138 32 chr15 58283934 58284281 -45210693 - ORR1C2 LTR MaLR 0 384 1 5 1029 23 0 0 0 chr15 58288500 58288523 -45206451 + AT_rich Low_complexity Low_complexity 1 23 0 5 1029 1202 149 46 9 chr15 58288790 58289007 -45205967 + URR1A DNA MER1_type 2 226 0 5 1029 599 145 66 41 chr15 58289464 58289586 -45205388 + MTD LTR MaLR 5 129 -290 5 1029 604 144 50 65 chr15 58289579 58289741 -45205233 - MTD LTR MaLR -73 348 190 5 1029 703 182 68 0 chr15 58290478 58290610 -45204364 - B1_Mur4 SINE Alu -9 141 1 5 1029 23 0 0 0 chr15 58290911 58290934 -45204040 + AT_rich Low_complexity Low_complexity 1 23 0 5 1029 475 246 32 24 chr15 58290976 58291101 -45203873 - Lx8 LINE L1 -375 7098 6973 5 1029 683 158 8 0 chr15 58291107 58291234 -45203740 + (TG)n Simple_repeat Simple_repeat 2 129 0 5 1029 1188 276 45 0 chr15 58291234 58291567 -45203407 - Lx8 LINE L1 -514 6959 6612 5 1029 1273 97 5 31 chr15 58291959 58292150 -45202824 + B2_Mm2 SINE B2 2 187 -8 5 1029 2242 129 45 33 chr15 58292193 58292617 -45202357 - RMER4A LTR ERVK -6 460 32 5 1029 356 186 171 23 chr15 58292756 58292844 -45202130 - PB1D10 SINE Alu 0 117 17 5 1029 1113 281 12 88 chr15 58292909 58293319 -45201655 - MTE2a LTR MaLR 0 379 1 5 1029 2481 71 6 3 chr15 58293361 58293687 -45201287 + ORR1A2 LTR MaLR 1 327 0 5 1029 394 98 0 124 chr15 58293911 58293922 -45201052 + polypyrimidine Low_complexity Low_complexity 83 92 0 5 1029 1263 94 0 0 chr15 58293922 58294102 -45200872 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 1029 394 98 0 124 chr15 58294102 58294195 -45200779 + polypyrimidine Low_complexity Low_complexity 1 82 0 5 1029 992 73 4 85 chr15 58294195 58294442 -45200532 + CT-rich Low_complexity Low_complexity 1 227 0 5 1029 673 118 0 16 chr15 58294470 58294591 -45200383 - L1Md_F2 LINE L1 0 6582 6464 5 1029 1457 88 0 0 chr15 58294591 58294785 -45200189 + L1_Mus2 LINE L1 5882 6075 -491 5 1029 7061 65 10 6 chr15 58295459 58296348 -45198626 - RLTR13B1 LTR ERVK 0 893 1 5 1029 438 20 0 0 chr15 58296348 58296399 -45198575 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1029 300 300 124 87 chr15 58296410 58296676 -45198298 - B4A SINE B4 -16 276 1 5 1029 351 247 21 0 chr15 58296693 58296790 -45198184 - MTEb LTR MaLR 0 379 281 5 1029 249 219 47 0 chr15 58296793 58296857 -45198117 + L2a LINE L2 3290 3356 -70 5 1029 279 0 0 0 chr15 58296915 58296946 -45198028 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 5 1029 264 342 34 82 chr15 58296993 58297085 -45197889 - B3A SINE B2 -1 197 1 5 1029 267 313 35 0 chr15 58297085 58297200 -45197774 - B4A SINE B4 -173 119 1 5 1029 255 61 0 0 chr15 58297231 58297264 -45197710 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1029 191 250 0 14 chr15 58297845 58297914 -45197060 + GA-rich Low_complexity Low_complexity 5 72 0 5 1029 279 0 0 0 chr15 58298171 58298202 -45196772 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1029 1247 229 67 64 chr15 58298386 58298760 -45196214 + MTEa LTR MaLR 5 379 0 5 1029 297 284 20 0 chr15 58299638 58299740 -45195234 + GA-rich Low_complexity Low_complexity 2 105 0 5 1029 236 284 19 29 chr15 58299838 58299943 -45195031 - Lx8 LINE L1 -2 7471 7368 5 1029 843 67 65 0 chr15 58300172 58300595 -45194379 + (TGGA)n Simple_repeat Simple_repeat 1 450 0 5 1029 1897 157 48 14 chr15 58300827 58301183 -45193791 - ORR1C1 LTR MaLR -10 368 1 5 1029 285 217 0 0 chr15 58303026 58303086 -45191888 - MLT1B LTR MaLR 0 390 331 5 1029 597 125 55 29 chr15 58303169 58303520 -45191454 + (TAGA)n Simple_repeat Simple_repeat 1 360 0 5 1029 848 286 69 7 chr15 58304806 58305112 -45189862 + L1MD LINE L1 5384 5708 -534 5 1029 288 255 31 31 chr15 58305112 58305209 -45189765 + MTD LTR MaLR 1 97 -322 5 1029 352 335 18 72 chr15 58305234 58305401 -45189573 + MTD LTR MaLR 42 199 -220 5 1029 5501 189 60 21 chr15 58305403 58306528 -45188446 + Lx7 LINE L1 6009 7177 -519 5 1029 289 180 0 0 chr15 58306528 58306578 -45188396 + B1_Mur2 SINE Alu 93 142 -7 5 1029 27 39 0 19 chr15 58306599 58306616 -45188358 + AT_rich Low_complexity Low_complexity 1 17 0 5 1029 1486 40 0 0 chr15 58306616 58306789 -45188185 + B2_Mm1a SINE B2 2 174 -19 5 1029 27 39 0 19 chr15 58306789 58306823 -45188151 + AT_rich Low_complexity Low_complexity 1 34 0 5 1029 440 233 49 20 chr15 58308157 58308361 -45186613 - MTEa LTR MaLR -54 365 89 5 1029 186 167 0 0 chr15 58308702 58308738 -45186236 + CT-rich Low_complexity Low_complexity 1 36 0 5 1029 195 42 0 0 chr15 58308782 58308806 -45186168 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1029 532 338 4 53 chr15 58308824 58309068 -45185906 - Lx7 LINE L1 -389 7307 7076 5 1029 951 212 60 95 chr15 58309090 58309407 -45185567 + MTD LTR MaLR 114 419 0 5 1029 735 279 48 7 chr15 58309841 58310112 -45184862 - B4A SINE B4 -10 282 1 5 1029 195 152 0 0 chr15 58310514 58310560 -45184414 + (CAAAC)n Simple_repeat Simple_repeat 1 46 0 5 1029 213 39 0 0 chr15 58311059 58311085 -45183889 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1029 186 298 62 31 chr15 58311147 58311244 -45183730 + MER5B DNA MER1_type 17 116 -62 5 1029 1128 12 41 12 chr15 58311522 58311694 -45183280 + (TCTA)n Simple_repeat Simple_repeat 3 179 0 6 1029 764 296 89 27 chr15 58311814 58312217 -45182757 - Charlie21a DNA MER1_type -644 569 142 6 1029 597 306 59 8 chr15 58312484 58312738 -45182236 - L1MA4A LINE L1 -388 5915 5649 6 1029 323 154 15 0 chr15 58312771 58312836 -45182138 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 6 1029 263 298 12 23 chr15 58312836 58312922 -45182052 - PB1D10 SINE Alu -27 90 6 6 1029 279 234 0 0 chr15 58312939 58313016 -45181958 + CT-rich Low_complexity Low_complexity 1 77 0 6 1029 253 264 42 114 chr15 58313067 58313234 -45181740 - RMER10A LTR ERVL -27 415 261 6 1029 533 106 0 78 chr15 58313268 58313422 -45181552 + GA-rich Low_complexity Low_complexity 4 145 0 6 1029 413 355 42 17 chr15 58313751 58313989 -45180985 + MLT1L LTR MaLR 359 602 -8 6 1029 491 182 10 0 chr15 58314394 58314493 -45180481 - RMER15 LTR ERVL -71 504 405 6 1029 296 264 18 70 chr15 58314528 58314642 -45180332 - RMER15 LTR ERVL -128 447 340 6 1029 2637 80 23 23 chr15 58315895 58316279 -45178695 - Lx2A LINE L1 -16 6992 6609 6 1029 243 0 0 0 chr15 58316478 58316505 -45178469 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 1029 230 233 14 0 chr15 58316523 58316596 -45178378 + (TG)n Simple_repeat Simple_repeat 1 74 0 6 1029 1568 103 0 5 chr15 58317281 58317505 -45177469 - Lx2 LINE L1 0 6997 6775 6 1029 7637 100 12 3 chr15 58317505 58318636 -45176338 - Lx2 LINE L1 -354 6643 5498 6 1029 2095 37 0 0 chr15 58318689 58318930 -45176044 + L1Md_F2 LINE L1 5345 5585 -298 6 1029 7999 49 12 10 chr15 58318931 58319924 -45175050 + L1Md_F2 LINE L1 5587 6581 -1 6 1029 256 342 72 0 chr15 58319940 58320051 -45174923 - MLT1J1 LTR MaLR -321 123 5 6 1029 300 295 13 0 chr15 58320224 58320302 -45174672 - ID2 SINE ID -2 81 3 6 1029 347 299 189 24 chr15 58320502 58320708 -45174266 + MIRb SINE MIR 17 256 -12 6 1029 626 203 0 7 chr15 58320792 58320941 -45174033 + (TA)n Simple_repeat Simple_repeat 2 149 0 6 1029 573 15 0 0 chr15 58321169 58321235 -45173739 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 6 1029 1149 58 0 0 chr15 58321235 58321372 -45173602 - B1_Mus1 SINE Alu -11 137 1 6 1029 2318 131 13 25 chr15 58322641 58323033 -45171941 + ORR1B1 LTR MaLR 6 392 -2 6 1029 340 276 170 12 chr15 58323442 58323607 -45171367 + L1MC LINE L1 3757 3947 -2199 6 1029 839 171 14 0 chr15 58323614 58323760 -45171214 + B1_Mur3 SINE Alu 1 148 -1 6 1029 201 146 0 0 chr15 58323771 58323819 -45171155 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 6 1029 401 287 44 33 chr15 58323819 58323999 -45170975 + L1MD LINE L1 3952 4133 -2013 6 1029 517 307 51 6 chr15 58324009 58324186 -45170788 - MLT1A LTR MaLR 0 374 190 6 1029 280 281 144 54 chr15 58324195 58324386 -45170588 + L2 LINE L2 295 508 -2911 6 1029 1793 204 62 3 chr15 58324386 58324744 -45170230 + MTE2a LTR MaLR 1 379 0 6 1029 280 281 144 54 chr15 58324744 58324774 -45170200 + L2 LINE L2 509 536 -2883 6 1029 231 315 64 21 chr15 58324804 58324898 -45170076 - RMER10A LTR ERVL -27 415 318 6 1029 405 0 0 0 chr15 58324977 58325022 -45169952 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1029 223 374 116 16 chr15 58325024 58325282 -45169692 + L2 LINE L2 1072 1355 -2064 6 1029 209 311 151 0 chr15 58325337 58325456 -45169518 + MIR SINE MIR 18 154 -108 6 1029 2082 101 70 24 chr15 58325826 58326176 -45168798 - Lx LINE L1 -85 6569 6207 6 1029 224 251 16 42 chr15 58326258 58326450 -45168524 + CT-rich Low_complexity Low_complexity 1 186 0 6 1029 185 175 259 17 chr15 58326482 58326540 -45168434 + L2 LINE L2 2300 2371 -1048 6 1029 241 306 39 47 chr15 58326670 58326797 -45168177 + L2 LINE L2 2545 2670 -749 6 1030 234 0 0 0 chr15 58327677 58327703 -45167271 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1030 22 0 0 0 chr15 58328478 58328500 -45166474 + AT_rich Low_complexity Low_complexity 1 22 0 6 1030 329 0 0 24 chr15 58328513 58328555 -45166419 + (TTG)n Simple_repeat Simple_repeat 2 42 0 6 1030 452 152 238 0 chr15 58328555 58328660 -45166314 - B1_Mur1 SINE Alu -7 142 13 6 1030 245 183 14 40 chr15 58328848 58328922 -45166052 - L1MA7 LINE L1 -172 6119 6048 6 1030 333 315 56 68 chr15 58329024 58329050 -45165924 - MER113 DNA MER1_type -191 330 313 6 1030 1127 75 0 7 chr15 58329050 58329189 -45165785 + B1_Mus1 SINE Alu 2 140 -8 6 1030 414 0 0 0 chr15 58329189 58329235 -45165739 + (CCAA)n Simple_repeat Simple_repeat 2 47 0 6 1030 333 315 56 68 chr15 58329242 58329467 -45165507 - MER113 DNA MER1_type -209 312 82 6 1030 363 274 88 9 chr15 58329825 58329939 -45165035 + RSINE1 SINE B4 31 153 -12 6 1030 259 282 45 22 chr15 58330140 58330273 -45164701 - Zaphod DNA Tip100 -301 3730 3595 6 1030 451 325 59 25 chr15 58330273 58330475 -45164499 - MER58A DNA MER1_type 0 224 16 6 1030 793 290 47 24 chr15 58331003 58331300 -45163674 - Zaphod DNA Tip100 -3415 616 313 6 1030 285 281 57 42 chr15 58331705 58331885 -45163089 + MER63A DNA AcHobo 2 142 -68 6 1030 1491 75 5 18 chr15 58331929 58332146 -45162828 + L1Md_F2 LINE L1 6369 6582 0 6 1030 2331 75 27 59 chr15 58333339 58333677 -45161297 - ORR1A2 LTR MaLR 0 327 1 6 1030 663 312 32 14 chr15 58333857 58334075 -45160899 - MER58A DNA MER1_type -1 223 2 6 1030 236 290 0 0 chr15 58334471 58334533 -45160441 - L1MB1 LINE L1 -54 6114 6053 6 1030 268 287 22 22 chr15 58335091 58335180 -45159794 + CT-rich Low_complexity Low_complexity 4 92 0 6 1030 205 264 60 30 chr15 58335751 58335884 -45159090 + (TGGG)n Simple_repeat Simple_repeat 2 138 0 6 1030 534 211 26 98 chr15 58336464 58336658 -45158316 - HAL1-2a_MD LINE L1 -495 2529 2350 6 1030 291 190 0 0 chr15 58336903 58336961 -45158013 + A-rich Low_complexity Low_complexity 2 59 0 6 1030 981 143 47 42 chr15 58337383 58337573 -45157401 + B2_Mm2 SINE B2 2 192 -3 6 1030 624 232 52 23 chr15 58337633 58337790 -45157184 + B3 SINE B2 1 163 -53 6 1030 276 77 0 0 chr15 58337790 58337829 -45157145 + (CATA)n Simple_repeat Simple_repeat 4 42 0 6 1030 624 232 52 23 chr15 58337829 58337843 -45157131 + B3 SINE B2 164 177 -39 6 1030 1131 77 0 0 chr15 58338598 58338741 -45156233 + B1_Mus1 SINE Alu 4 146 -2 6 1030 191 213 98 0 chr15 58339597 58339658 -45155316 - MIRb SINE MIR -81 187 121 6 1030 673 92 33 55 chr15 58340298 58340481 -45154493 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 6 1030 201 147 0 0 chr15 58340498 58340532 -45154442 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 6 1030 240 318 136 7 chr15 58341089 58341244 -45153730 - MER3 DNA MER1_type -18 191 17 6 1030 272 370 144 10 chr15 58342684 58342886 -45152088 - MamRep38 DNA hAT -43 252 24 6 1030 1285 95 4 4 chr15 58343122 58343385 -45151589 + (TCCA)n Simple_repeat Simple_repeat 1 263 0 6 1030 1258 155 22 9 chr15 58344354 58344576 -45150398 - URR1B DNA MER1_type 0 225 1 6 1030 496 289 79 83 chr15 58345535 58345825 -45149149 + B4A SINE B4 4 292 0 6 1030 260 378 0 0 chr15 58345829 58346009 -45148965 + (CCCA)n Simple_repeat Simple_repeat 1 180 0 6 1030 224 418 0 0 chr15 58345972 58346149 -45148825 + (CA)n Simple_repeat Simple_repeat 2 178 0 6 1030 282 378 0 0 chr15 58346109 58346289 -45148685 + (CCCA)n Simple_repeat Simple_repeat 1 180 0 6 1030 693 250 47 21 chr15 58346807 58346947 -45148027 + B3A SINE B2 1 145 -53 6 1030 288 0 0 0 chr15 58346947 58346979 -45147995 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 6 1030 693 250 47 21 chr15 58346979 58347030 -45147944 + B3A SINE B2 146 196 -2 6 1030 222 362 29 0 chr15 58347127 58347232 -45147742 - MIR SINE MIR -90 172 65 6 1030 432 229 185 123 chr15 58348254 58348637 -45146337 + RMER10A LTR ERVL 12 418 -24 6 1030 230 391 0 0 chr15 58348784 58348871 -45146103 + MLT1N2 LTR MaLR 145 231 -331 6 1030 228 185 0 122 chr15 58349051 58349125 -45145849 + MLT1N2 LTR MaLR 494 558 -4 6 1030 304 127 15 31 chr15 58349564 58349629 -45145345 + GA-rich Low_complexity Low_complexity 1 64 0 6 1030 258 156 0 0 chr15 58349711 58349756 -45145218 + GA-rich Low_complexity Low_complexity 2 46 0 6 1030 829 229 71 5 chr15 58349988 58350172 -45144802 + B3A SINE B2 2 197 -1 6 1030 333 302 26 109 chr15 58350775 58350876 -45144098 + MIRb SINE MIR 3 102 -166 6 1030 2112 172 66 15 chr15 58350876 58351272 -45143702 + MTC LTR MaLR 3 418 -3 6 1030 333 311 22 97 chr15 58351272 58351432 -45143542 + MIRb SINE MIR 103 255 -13 6 1030 234 287 92 0 chr15 58352326 58352413 -45142561 + B3A SINE B2 1 95 -103 6 1030 330 45 0 0 chr15 58352437 58352481 -45142493 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1030 288 0 0 0 chr15 58352819 58352851 -45142123 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1030 715 85 60 14 chr15 58353904 58354325 -45140649 + (TCTA)n Simple_repeat Simple_repeat 1 440 0 6 1030 217 326 116 0 chr15 58354325 58354411 -45140563 + MIRc SINE MIR 128 223 -45 6 1030 835 110 7 46 chr15 58354859 58355011 -45139963 + URR1A DNA MER1_type 81 226 0 6 1030 342 115 0 0 chr15 58355560 58355612 -45139362 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1030 2703 91 64 16 chr15 58355617 58356041 -45138933 - Lx LINE L1 -6 6648 6205 6 1030 897 146 0 0 chr15 58357039 58357190 -45137784 + (TTC)n Simple_repeat Simple_repeat 1 151 0 6 1030 258 88 0 0 chr15 58357190 58357224 -45137750 + (TCC)n Simple_repeat Simple_repeat 2 35 0 6 1030 247 146 0 35 chr15 58357224 58357281 -45137693 + CT-rich Low_complexity Low_complexity 2 56 0 6 1030 667 324 54 40 chr15 58357306 58357750 -45137224 - LTR16B LTR ERVL -2 461 12 6 1030 191 278 0 0 chr15 58359223 58359277 -45135697 + MIR SINE MIR 106 159 -103 6 1030 318 218 2 0 chr15 58359550 58359627 -45135347 - ID2 SINE ID -4 79 2 6 1030 531 254 9 0 chr15 58360391 58360505 -45134469 - PB1D10 SINE Alu -1 116 2 6 1030 205 331 83 28 chr15 58360874 58361038 -45133936 - MIRm SINE MIR -87 189 3 6 1030 498 196 0 0 chr15 58362351 58362463 -45132511 + CT-rich Low_complexity Low_complexity 2 113 0 6 1030 433 209 0 0 chr15 58362535 58362626 -45132348 - ORR1C2 LTR MaLR -293 91 1 6 1030 267 254 14 14 chr15 58363508 58363580 -45131394 - L1M2 LINE L1 -533 5764 5693 6 1030 280 205 103 10 chr15 58364254 58364352 -45130622 - MTEa LTR MaLR 0 379 281 6 1030 967 242 58 97 chr15 58364391 58364702 -45130272 - MTEa LTR MaLR -77 302 4 6 1030 324 256 102 42 chr15 58366540 58366707 -45128267 - MIRc SINE MIR -38 230 54 7 1030 21 82 0 0 chr15 58366982 58367031 -45127943 + AT_rich Low_complexity Low_complexity 1 49 0 7 1030 256 277 136 43 chr15 58367650 58367812 -45127162 - MTEb LTR MaLR -2 377 201 7 1030 550 162 317 6 chr15 58367850 58368011 -45126963 - MTD LTR MaLR 0 419 209 7 1030 2396 143 39 108 chr15 58368011 58368520 -45126454 - RMER1C Other Other -1 1341 868 7 1030 702 256 50 0 chr15 58368520 58368700 -45126274 - MTD LTR MaLR -224 195 7 7 1030 462 303 30 8 chr15 58370491 58370624 -45124350 + B4A SINE B4 11 146 -146 7 1030 506 223 7 84 chr15 58370637 58370779 -45124195 - B4 SINE B4 -159 133 3 7 1030 378 0 0 0 chr15 58370950 58370992 -45123982 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1030 252 293 36 12 chr15 58371005 58371088 -45123886 - Lx8 LINE L1 -1567 5906 5822 7 1030 285 184 89 30 chr15 58371156 58371256 -45123718 - PB1D7 SINE Alu -1 119 6 7 1030 1168 75 7 0 chr15 58372858 58373004 -45121970 + B1_Mus1 SINE Alu 2 148 0 7 1030 345 47 0 0 chr15 58373027 58373070 -45121904 + (GGAA)n Simple_repeat Simple_repeat 3 45 0 7 1030 334 303 68 68 chr15 58374271 58374448 -45120526 - MER45A DNA Tip100 -1 177 1 7 1030 2315 86 3 79 chr15 58374885 58375238 -45119736 - ORR1A3 LTR MaLR 0 326 1 7 1030 633 252 234 4 chr15 58375295 58375526 -45119448 + B4 SINE B4 3 286 -6 7 1030 207 213 26 13 chr15 58376694 58376770 -45118204 + CT-rich Low_complexity Low_complexity 1 77 0 7 1030 324 0 0 0 chr15 58377132 58377168 -45117806 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1030 189 274 50 89 chr15 58377232 58377412 -45117562 - L2 LINE L2 -455 2964 2792 7 1030 299 25 25 0 chr15 58377897 58377937 -45117037 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 7 1030 204 277 0 0 chr15 58378251 58378334 -45116640 + (CA)n Simple_repeat Simple_repeat 1 83 0 7 1030 252 336 53 8 chr15 58379104 58379236 -45115738 - ORR1E LTR MaLR -221 138 1 7 1030 302 347 20 27 chr15 58381177 58381325 -45113649 - MIRb SINE MIR -23 245 99 7 1030 492 174 0 0 chr15 58381501 58381593 -45113381 + (TA)n Simple_repeat Simple_repeat 2 93 0 7 1030 423 0 0 0 chr15 58382522 58382569 -45112405 + (TA)n Simple_repeat Simple_repeat 2 48 0 7 1030 432 0 0 0 chr15 58383547 58383595 -45111379 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1030 271 203 159 0 chr15 58383681 58383750 -45111224 - ID4 SINE ID -1 82 3 7 1030 392 272 0 21 chr15 58384209 58384303 -45110671 - RSINE1 SINE B4 -8 157 66 7 1030 209 33 0 32 chr15 58384531 58384562 -45110412 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 7 1030 1010 247 154 12 chr15 58384623 58384947 -45110027 + ORR1D2 LTR MaLR 1 370 0 7 1030 1259 254 51 16 chr15 58386867 58387183 -45107791 - Lx8 LINE L1 -548 6925 6599 7 1030 1316 240 53 15 chr15 58387187 58387525 -45107449 + Lx8 LINE L1 7121 7471 -2 7 1030 308 73 36 0 chr15 58387991 58388046 -45106928 + (CAGA)n Simple_repeat Simple_repeat 2 58 0 7 1030 341 178 14 14 chr15 58388049 58388123 -45106851 + HAL1-3A_ME LINE L1 1976 2049 -809 7 1030 200 340 10 30 chr15 58388392 58388492 -45106482 - L3 LINE CR1 -127 4362 4265 7 1030 221 311 18 62 chr15 58388892 58389005 -45105969 - L2b LINE L2 -207 3168 3061 7 1030 786 113 0 0 chr15 58389139 58389272 -45105702 + (TG)n Simple_repeat Simple_repeat 1 133 0 7 1030 321 135 0 0 chr15 58390168 58390220 -45104754 + (TTA)n Simple_repeat Simple_repeat 2 53 0 7 1030 222 37 0 0 chr15 58390548 58390575 -45104399 + (A)n Simple_repeat Simple_repeat 1 27 0 7 1030 227 127 105 35 chr15 58391256 58391313 -45103661 - ORR1B1 LTR MaLR -331 63 3 7 1030 370 275 105 15 chr15 58393402 58393535 -45101439 - MIR SINE MIR -75 187 43 7 1030 239 365 31 12 chr15 58393762 58393923 -45101051 + L2 LINE L2 2607 2770 -649 7 1030 938 152 260 0 chr15 58393947 58394124 -45100850 - URR1A DNA MER1_type -3 223 1 7 1030 695 0 0 0 chr15 58394181 58394265 -45100709 - L1Md_A LINE L1 0 6582 6499 7 1030 22 0 0 0 chr15 58394911 58394933 -45100041 + AT_rich Low_complexity Low_complexity 1 22 0 7 1030 1724 166 3 19 chr15 58394934 58395247 -45099727 - Lx4A LINE L1 -4 7054 6747 7 1030 429 20 0 0 chr15 58396582 58396632 -45098342 + (TC)n Simple_repeat Simple_repeat 1 50 0 7 1030 192 40 0 0 chr15 58396634 58396659 -45098315 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 1030 1287 102 23 0 chr15 58396846 58397023 -45097951 + B2_Mm2 SINE B2 1 181 -14 7 1030 1127 174 80 9 chr15 58397168 58397394 -45097580 + 7SK RNA RNA 1 242 -89 7 1030 665 286 58 33 chr15 58397387 58397629 -45097345 - MLT1F1 LTR MaLR -155 414 167 7 1030 885 217 81 12 chr15 58398206 58398453 -45096521 - MTEa LTR MaLR 0 379 89 7 1030 826 174 161 45 chr15 58399171 58399370 -45095604 - URR1B DNA MER1_type -3 222 1 7 1030 242 292 52 0 chr15 58399469 58399565 -45095409 + MIR3 SINE MIR 78 178 -30 7 1030 1745 132 97 62 chr15 58399707 58400079 -45094895 - ORR1B1 LTR MaLR -9 385 1 7 1030 238 264 174 7 chr15 58400984 58401132 -45093842 + MIRb SINE MIR 29 203 -65 7 1030 976 211 191 51 chr15 58401427 58401580 -45093394 - Lx7 LINE L1 -1 7695 7538 7 1030 324 70 0 0 chr15 58401580 58401623 -45093351 + (ATATG)n Simple_repeat Simple_repeat 3 45 0 7 1030 976 211 191 51 chr15 58401623 58401804 -45093170 - Lx7 LINE L1 -159 7537 7314 7 1030 43 56 0 0 chr15 58401818 58401889 -45093085 + AT_rich Low_complexity Low_complexity 1 71 0 7 1030 943 196 112 13 chr15 58401907 58402139 -45092835 - Lx7 LINE L1 -354 7342 7088 7 1030 446 322 20 14 chr15 58402421 58402569 -45092405 + RSINE1 SINE B4 11 159 -6 7 1030 233 206 0 31 chr15 58402581 58402646 -45092328 + A-rich Low_complexity Low_complexity 3 65 0 7 1030 550 283 47 37 chr15 58403610 58403634 -45091340 - B3A SINE B2 -5 193 173 7 1030 204 40 0 0 chr15 58403634 58403659 -45091315 + (TGGGGG)n Simple_repeat Simple_repeat 6 30 0 7 1030 550 283 47 37 chr15 58403659 58403825 -45091149 - B3A SINE B2 -26 172 1 7 1030 747 253 157 11 chr15 58403926 58404194 -45090780 - ORR1E LTR MaLR -15 344 38 7 1030 555 215 0 17 chr15 58404207 58404387 -45090587 + (CA)n Simple_repeat Simple_repeat 1 177 0 7 1030 452 225 92 15 chr15 58404804 58404935 -45090039 - ID_B1 SINE B4 -3 221 81 7 1030 267 236 228 38 chr15 58405996 58406143 -45088831 - MIR SINE MIR -87 181 10 7 1030 489 231 0 0 chr15 58407367 58407488 -45087486 + (TA)n Simple_repeat Simple_repeat 2 122 0 7 1030 492 259 86 26 chr15 58409798 58409949 -45085025 + B3 SINE B2 16 175 -41 7 1030 549 291 65 81 chr15 58410668 58410990 -45083984 - MTEb LTR MaLR -59 320 4 7 1030 264 323 97 0 chr15 58412194 58412349 -45082625 - L2 LINE L2 -379 3040 2871 7 1030 416 232 159 49 chr15 58412621 58412784 -45082190 - ID_B1 SINE B4 -2 222 42 7 1030 191 324 29 0 chr15 58412887 58412955 -45082019 + MIRb SINE MIR 131 200 -68 7 1030 289 306 120 8 chr15 58415433 58415558 -45079416 + B1F1 SINE Alu 1 139 -10 7 1030 390 91 0 0 chr15 58415573 58415628 -45079346 + (GA)n Simple_repeat Simple_repeat 2 56 0 7 1030 298 292 1 0 chr15 58415628 58415715 -45079259 + ID4 SINE ID 8 95 -57 7 1030 284 175 16 0 chr15 58415720 58415783 -45079191 + GA-rich Low_complexity Low_complexity 3 66 0 7 1030 662 235 35 6 chr15 58415804 58415975 -45078999 - MLT1C LTR MaLR -291 176 1 7 1030 973 245 28 117 chr15 58416244 58416637 -45078337 + MTEa LTR MaLR 22 379 0 7 1030 477 0 0 0 chr15 58416721 58416774 -45078200 + (TA)n Simple_repeat Simple_repeat 1 53 0 7 1030 277 301 64 61 chr15 58417647 58417940 -45077034 - MTE2b LTR MaLR -4 375 60 7 1030 189 0 0 0 chr15 58418124 58418145 -45076829 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 7 1030 912 156 0 0 chr15 58418230 58418410 -45076564 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 1030 225 245 0 19 chr15 58419182 58419236 -45075738 + CT-rich Low_complexity Low_complexity 4 56 0 7 1030 538 245 127 26 chr15 58419750 58419939 -45075035 - Tigger7 DNA MER2_type -2 2489 2282 7 1030 1165 115 183 0 chr15 58420033 58420224 -45074750 - URR1A DNA MER1_type 0 226 1 7 1030 938 249 90 73 chr15 58420250 58420618 -45074356 - MTEa LTR MaLR -1 378 5 7 1030 498 98 0 0 chr15 58421196 58421278 -45073696 + (CA)n Simple_repeat Simple_repeat 1 82 0 7 1030 360 0 0 0 chr15 58424524 58424564 -45070410 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 1030 235 270 169 58 chr15 58424898 58425087 -45069887 - L1M5 LINE L1 -283 5911 5702 7 1030 216 0 0 0 chr15 58425948 58425972 -45069002 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 1030 297 51 0 0 chr15 58426541 58426580 -45068394 + (CTG)n Simple_repeat Simple_repeat 2 40 0 7 1030 180 0 0 0 chr15 58426620 58426640 -45068334 + (CCCCG)n Simple_repeat Simple_repeat 5 24 0 7 1030 783 258 86 17 chr15 58427824 58428057 -45066917 + B4 SINE B4 2 250 -42 7 1030 223 341 29 7 chr15 58428064 58428200 -45066774 + (CATATA)n Simple_repeat Simple_repeat 1 139 0 7 1030 405 0 0 0 chr15 58429436 58429481 -45065493 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1030 212 211 0 0 chr15 58429608 58429646 -45065328 - L2a LINE L2 -14 3412 3375 7 1030 180 339 73 16 chr15 58429678 58429801 -45065173 - MIRm SINE MIR -125 151 22 7 1030 663 98 0 10 chr15 58429867 58429970 -45065004 - URR1B DNA MER1_type 0 225 124 7 1030 215 286 163 0 chr15 58431556 58431654 -45063320 + MIRb SINE MIR 147 260 -8 7 1030 232 281 176 13 chr15 58432784 58432934 -45062040 - MIRc SINE MIR -33 175 13 7 1030 691 197 6 6 chr15 58434457 58434636 -45060338 + (TG)n Simple_repeat Simple_repeat 2 180 0 8 1030 525 271 149 43 chr15 58434982 58435283 -45059691 - MLT1A0 LTR MaLR -2 363 31 8 1030 189 333 18 0 chr15 58435429 58435486 -45059488 + MIR SINE MIR 35 92 -170 8 1030 181 255 19 19 chr15 58436158 58436210 -45058764 - L3 LINE CR1 -17 4472 4421 8 1030 217 329 14 0 chr15 58436517 58436590 -45058384 + (TG)n Simple_repeat Simple_repeat 1 74 0 8 1030 779 250 148 8 chr15 58436594 58436844 -45058130 - B4A SINE B4 -6 286 2 8 1030 24 0 0 0 chr15 58438886 58438910 -45056064 + AT_rich Low_complexity Low_complexity 1 24 0 8 1030 38770 30 0 1 chr15 58438913 58445562 -45049412 - L1Md_T LINE L1 0 6585 1 8 1030 679 156 14 0 chr15 58446042 58446183 -45048791 + (CA)n Simple_repeat Simple_repeat 2 144 0 8 1030 247 264 46 76 chr15 58446255 58446386 -45048588 - L1MEg LINE L1 -4736 1348 1222 8 1030 447 293 83 29 chr15 58446396 58446674 -45048300 - L1MEg LINE L1 -5280 804 512 8 1030 377 335 43 0 chr15 58447153 58447314 -45047660 - MIRb SINE MIR -31 237 70 8 1030 310 300 112 41 chr15 58448620 58448861 -45046113 - L1MA4 LINE L1 -68 6232 5968 8 1030 860 241 35 0 chr15 58448890 58449093 -45045881 + B3 SINE B2 1 210 -6 8 1030 441 269 20 14 chr15 58450832 58450979 -45043995 + B1F SINE Alu 1 148 -1 8 1030 392 194 14 0 chr15 58450988 58451060 -45043914 + ID4_ SINE ID 2 74 -9 8 1030 219 316 20 50 chr15 58451102 58451202 -45043772 + MER5A DNA MER1_type 75 171 -18 8 1030 438 20 0 0 chr15 58452468 58452519 -45042455 + (CA)n Simple_repeat Simple_repeat 1 51 0 8 1030 560 237 82 0 chr15 58452531 58452666 -45042308 - B3A SINE B2 -52 146 1 8 1030 348 370 28 33 chr15 58452823 58453038 -45041936 - L1M5 LINE L1 -432 5762 5549 8 1030 180 265 20 0 chr15 58453739 58453788 -45041186 - MIR SINE MIR -64 144 95 8 1030 325 310 41 0 chr15 58454154 58454279 -45040695 + MIRb SINE MIR 80 217 -51 8 1030 416 284 10 0 chr15 58454684 58454786 -45040188 + PB1D10 SINE Alu 9 111 -6 8 1030 6603 96 34 8 chr15 58455704 58456637 -45038337 - RMER17B LTR ERVK 0 958 1 8 1031 278 108 59 24 chr15 58458267 58458352 -45036622 + (CA)n Simple_repeat Simple_repeat 2 89 0 8 1031 223 55 0 85 chr15 58458349 58458408 -45036566 + (CACCAT)n Simple_repeat Simple_repeat 4 57 0 8 1031 192 40 0 0 chr15 58458493 58458518 -45036456 + (CA)n Simple_repeat Simple_repeat 1 25 0 8 1031 285 305 12 0 chr15 58458587 58458669 -45036305 - MIR SINE MIR -116 146 64 8 1031 24 0 0 0 chr15 58459655 58459679 -45035295 + AT_rich Low_complexity Low_complexity 1 24 0 8 1031 769 227 71 15 chr15 58459927 58460092 -45034882 + B3 SINE B2 2 177 -39 8 1031 525 80 0 0 chr15 58460092 58460167 -45034807 + (CATA)n Simple_repeat Simple_repeat 4 78 0 8 1031 769 227 71 15 chr15 58460167 58460198 -45034776 + B3 SINE B2 178 209 -7 8 1031 732 259 36 14 chr15 58460615 58460834 -45034140 + MTE-int LTR MaLR 135 358 -1222 8 1031 2323 53 0 3 chr15 58461169 58461454 -45033520 - L1_Mus1 LINE L1 0 6567 6284 8 1031 272 346 9 9 chr15 58461763 58461868 -45033106 + MIRb SINE MIR 49 153 -115 8 1031 435 288 46 64 chr15 58462339 58462558 -45032416 - MLT1B LTR MaLR 0 390 160 8 1031 23 68 0 0 chr15 58462934 58462978 -45031996 + AT_rich Low_complexity Low_complexity 1 44 0 8 1031 247 158 42 0 chr15 58463191 58463251 -45031723 + B1_Mur1 SINE Alu 52 142 -7 8 1031 269 248 27 116 chr15 58463527 58463673 -45031301 - MER103 DNA DNA -5 161 29 8 1031 23 0 0 0 chr15 58464341 58464364 -45030610 + AT_rich Low_complexity Low_complexity 1 23 0 8 1031 213 308 46 0 chr15 58465052 58465117 -45029857 + MER5B DNA MER1_type 1 68 -110 8 1031 363 18 17 35 chr15 58465419 58465477 -45029497 + (GTGTG)n Simple_repeat Simple_repeat 1 57 0 8 1031 237 33 0 0 chr15 58465925 58465955 -45029019 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 1031 246 164 0 0 chr15 58465958 58466013 -45028961 + GA-rich Low_complexity Low_complexity 1 55 0 8 1031 338 91 18 0 chr15 58466098 58466153 -45028821 + (TG)n Simple_repeat Simple_repeat 2 57 0 8 1031 372 267 78 0 chr15 58466175 58466265 -45028709 - B3 SINE B2 -89 127 31 8 1031 352 298 65 26 chr15 58467020 58467175 -45027799 + L2a LINE L2 3266 3426 0 8 1031 2365 62 0 19 chr15 58467182 58467516 -45027458 + L1Md_F2 LINE L1 6256 6582 0 8 1031 247 49 49 0 chr15 58470427 58470468 -45024506 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 8 1031 468 0 0 0 chr15 58470776 58470828 -45024146 + (TG)n Simple_repeat Simple_repeat 1 52 0 8 1031 590 263 61 38 chr15 58470935 58471148 -45023826 + L1MB5 LINE L1 5949 6166 -8 8 1031 229 117 15 91 chr15 58471152 58471189 -45023785 + T-rich Low_complexity Low_complexity 28 64 0 8 1031 1208 68 0 0 chr15 58471189 58471337 -45023637 - B1_Mus1 SINE Alu 0 148 1 8 1031 229 117 15 91 chr15 58471337 58471365 -45023609 + T-rich Low_complexity Low_complexity 4 27 0 8 1031 22 0 0 0 chr15 58472840 58472862 -45022112 + AT_rich Low_complexity Low_complexity 1 22 0 8 1031 342 0 0 0 chr15 58473079 58473117 -45021857 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 1031 684 241 76 57 chr15 58474143 58474354 -45020620 + MER20 DNA MER1_type 1 215 -4 8 1031 394 341 15 0 chr15 58474618 58474753 -45020221 + ID_B1 SINE B4 87 223 -1 8 1031 1834 68 13 0 chr15 58475739 58475975 -45018999 - L1_Mus1 LINE L1 -3 6564 6326 8 1031 2550 77 0 3 chr15 58475975 58476302 -45018672 + L1_Mus1 LINE L1 5990 6315 -252 8 1031 468 51 0 0 chr15 58476930 58476989 -45017985 + (TG)n Simple_repeat Simple_repeat 2 60 0 8 1031 677 252 31 1 chr15 58477452 58477618 -45017356 + B3A SINE B2 1 168 -30 8 1031 270 0 0 0 chr15 58477618 58477648 -45017326 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 1031 417 279 40 80 chr15 58477648 58477680 -45017294 + B2_Mm2 SINE B2 157 191 -4 8 1031 214 333 52 37 chr15 58477878 58478012 -45016962 - MIR SINE MIR -79 183 48 8 1031 782 221 57 24 chr15 58478941 58479150 -45015824 + B3 SINE B2 1 216 0 8 1031 784 163 0 27 chr15 58479472 58479655 -45015319 + (TA)n Simple_repeat Simple_repeat 2 179 0 8 1031 342 0 0 0 chr15 58480400 58480438 -45014536 + (TC)n Simple_repeat Simple_repeat 2 39 0 8 1031 1525 228 37 6 chr15 58481405 58481758 -45013216 - ORR1D2 LTR MaLR -1 369 6 8 1031 1304 81 32 21 chr15 58481892 58482082 -45012892 + B2_Mm2 SINE B2 2 193 -2 8 1031 771 258 106 13 chr15 58482307 58482610 -45012364 + L1MB8 LINE L1 5693 6023 -155 8 1031 351 0 0 0 chr15 58483824 58483863 -45011111 + (CATA)n Simple_repeat Simple_repeat 2 40 0 8 1031 1623 176 107 8 chr15 58484240 58484595 -45010379 - MTD LTR MaLR -28 391 2 8 1031 393 300 169 36 chr15 58484597 58484905 -45010069 - MER67C LTR ERV1 -86 625 277 8 1031 638 279 26 16 chr15 58485070 58485259 -45009715 - MER67C LTR ERV1 -456 255 65 8 1031 302 179 0 56 chr15 58485274 58485345 -45009629 - PB1D10 SINE Alu -1 116 50 8 1031 252 0 0 0 chr15 58485731 58485759 -45009215 + (CCCCCA)n Simple_repeat Simple_repeat 2 29 0 8 1031 499 266 16 0 chr15 58485832 58485956 -45009018 + B1F SINE Alu 2 127 -22 8 1031 885 240 97 37 chr15 58486763 58487062 -45007912 - MTEb LTR MaLR -20 359 43 8 1031 1402 23 11 0 chr15 58487421 58487595 -45007379 + (TCTCCC)n Simple_repeat Simple_repeat 5 180 0 8 1031 218 122 0 47 chr15 58487598 58487641 -45007333 + C-rich Low_complexity Low_complexity 2 42 0 8 1031 315 0 0 0 chr15 58488144 58488179 -45006795 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 1031 572 293 105 24 chr15 58488204 58488498 -45006476 - ORR1E LTR MaLR -40 319 2 8 1031 559 267 55 0 chr15 58489429 58489575 -45005399 + RSINE1 SINE B4 12 165 0 8 1031 218 81 27 0 chr15 58490040 58490077 -45004897 + (CAT)n Simple_repeat Simple_repeat 2 39 0 8 1031 226 355 29 14 chr15 58490539 58490679 -45004295 + MIRc SINE MIR 3 144 -124 8 1031 546 57 0 0 chr15 58491425 58491495 -45003479 + (CA)n Simple_repeat Simple_repeat 2 71 0 8 1031 697 321 5 5 chr15 58491930 58492146 -45002828 - B4A SINE B4 -76 216 1 8 1031 543 98 0 0 chr15 58492596 58492688 -45002286 + (TAGA)n Simple_repeat Simple_repeat 2 93 0 8 1031 208 147 0 0 chr15 58492835 58492869 -45002105 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1031 1449 205 105 6 chr15 58493183 58493497 -45001477 + Lx7 LINE L1 7072 7416 -280 8 1031 258 39 0 73 chr15 58493569 58493624 -45001350 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 8 1031 495 191 35 0 chr15 58493632 58493747 -45001227 + Lx7 LINE L1 7578 7696 0 8 1031 27 29 0 0 chr15 58493747 58493781 -45001193 + AT_rich Low_complexity Low_complexity 1 34 0 8 1031 206 236 0 0 chr15 58494343 58494398 -45000576 + (CAT)n Simple_repeat Simple_repeat 1 55 0 8 1031 800 99 0 0 chr15 58495037 58495158 -44999816 + URR1B DNA MER1_type 103 223 -2 8 1031 290 380 11 10 chr15 58495805 58495953 -44999021 - ID_B1 SINE B4 -5 219 74 8 1031 260 296 0 0 chr15 58497544 58497615 -44997359 + (TG)n Simple_repeat Simple_repeat 1 71 0 8 1031 3141 45 24 0 chr15 58497637 58498013 -44996961 + IAPEY_LTR LTR ERVK 1 385 0 8 1031 598 339 35 30 chr15 58498027 58498258 -44996716 - B4A SINE B4 0 292 61 8 1031 672 189 20 27 chr15 58499853 58500000 -44994974 - MTD LTR MaLR -207 212 67 8 1031 234 0 0 0 chr15 58500027 58500053 -44994921 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1031 234 231 0 0 chr15 58503062 58503127 -44991847 + (CGTG)n Simple_repeat Simple_repeat 4 68 0 2 1031 457 291 98 14 chr15 58503436 58503579 -44991395 - MLT1B LTR MaLR -180 210 56 3 1031 2621 171 36 63 chr15 58503816 58504339 -44990635 + RMER1B Other Other 556 1064 -2 4 1031 199 311 38 75 chr15 58504570 58504650 -44990324 + L4 LINE RTE 1485 1561 -468 5 1031 205 258 44 29 chr15 58505181 58505249 -44989725 - MER5A DNA MER1_type 0 189 121 6 1031 2114 144 20 9 chr15 58505427 58505777 -44989197 + ORR1B2 LTR MaLR 1 354 -13 7 1031 1478 241 6 37 chr15 58505796 58506106 -44988868 - MTEa LTR MaLR -62 317 17 8 1031 3350 53 2 0 chr15 58506106 58506504 -44988470 + MTB LTR MaLR 2 400 0 9 1031 1478 241 6 37 chr15 58506504 58506520 -44988454 - MTEa LTR MaLR -363 16 1 8 1031 1749 221 101 0 chr15 58507434 58507810 -44987164 + MTD LTR MaLR 1 414 -5 1 1031 289 317 79 112 chr15 58507815 58508206 -44986768 - MTEa LTR MaLR -1 378 1 1 1031 351 0 0 0 chr15 58508673 58508712 -44986262 + (CATA)n Simple_repeat Simple_repeat 4 42 0 1 1031 201 352 0 0 chr15 58508817 58508871 -44986103 - MIR SINE MIR -58 150 97 1 1031 21 0 0 0 chr15 58509692 58509713 -44985261 + AT_rich Low_complexity Low_complexity 1 21 0 1 1031 235 316 25 25 chr15 58509736 58509817 -44985157 + PB1D10 SINE Alu 1 81 -36 1 1031 328 250 48 0 chr15 58510393 58510477 -44984497 + B1F SINE Alu 55 142 -7 1 1031 433 315 130 19 chr15 58510552 58510814 -44984160 + L1MC LINE L1 3212 3502 -2644 1 1031 547 250 14 35 chr15 58511273 58511414 -44983560 - ORR1E LTR MaLR 0 379 242 1 1031 241 232 0 14 chr15 58511421 58511531 -44983443 + (CAGA)n Simple_repeat Simple_repeat 1 108 0 1 1031 270 0 0 0 chr15 58511532 58511562 -44983412 + (GA)n Simple_repeat Simple_repeat 2 31 0 2 1031 969 180 43 5 chr15 58511562 58511746 -44983228 - ORR1E LTR MaLR -168 191 1 1 1031 1219 62 0 0 chr15 58511773 58511918 -44983056 - B1_Mus2 SINE Alu -1 146 2 2 1031 225 167 216 108 chr15 58512324 58512398 -44982576 - ID4_ SINE ID -1 82 1 2 1031 266 324 57 0 chr15 58512407 58512512 -44982462 - PB1D10 SINE Alu -5 112 2 2 1031 408 299 34 28 chr15 58512513 58512692 -44982282 - L1ME3A LINE L1 -41 6132 5953 2 1031 186 327 183 0 chr15 58512839 58512943 -44982031 + MIRb SINE MIR 9 131 -137 2 1031 270 0 0 0 chr15 58512982 58513012 -44981962 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 2 1031 475 239 61 9 chr15 58513018 58513132 -44981842 + ID_B1 SINE B4 105 224 0 2 1031 213 219 10 40 chr15 58513161 58513261 -44981713 + GA-rich Low_complexity Low_complexity 1 97 0 2 1031 1243 22 0 0 chr15 58513913 58514052 -44980922 + B1_Mus2 SINE Alu 1 139 -8 2 1031 306 0 0 0 chr15 58514052 58514086 -44980888 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 3 1031 1391 41 17 0 chr15 58514432 58514604 -44980370 + L1_Mus1 LINE L1 6392 6566 -1 3 1031 376 327 9 0 chr15 58514896 58515006 -44979968 - ORR1E LTR MaLR -248 111 1 3 1031 449 250 19 0 chr15 58515012 58515116 -44979858 + L1MA6 LINE L1 6184 6289 -11 3 1031 3696 47 0 7 chr15 58515398 58515851 -44979123 + L1_Mus1 LINE L1 6118 6567 0 3 1031 350 316 25 25 chr15 58517973 58518093 -44976881 - MLT1A1 LTR MaLR 0 408 289 3 1031 234 150 0 0 chr15 58518160 58518200 -44976774 + (TTC)n Simple_repeat Simple_repeat 2 41 0 3 1031 1226 55 0 0 chr15 58518202 58518348 -44976626 - B1_Mm SINE Alu 0 147 2 3 1031 324 135 40 0 chr15 58518502 58518576 -44976398 + G-rich Low_complexity Low_complexity 1 77 0 3 1031 679 275 63 0 chr15 58518579 58518721 -44976253 - RSINE1 SINE B4 -13 152 2 3 1031 234 0 0 0 chr15 58518747 58518773 -44976201 + (TTGG)n Simple_repeat Simple_repeat 1 26 0 4 1031 364 252 114 2 chr15 58518852 58518969 -44976005 - MIRb SINE MIR -91 171 44 4 1031 199 303 30 0 chr15 58519791 58519857 -44975117 + MER5A DNA MER1_type 49 116 -73 4 1031 262 279 78 54 chr15 58519941 58520070 -44974904 - L2a LINE L2 -18 3408 3277 4 1031 252 0 93 0 chr15 58521044 58521087 -44973887 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 4 1031 202 250 0 0 chr15 58521227 58521271 -44973703 - MIRb SINE MIR -103 165 122 4 1031 311 296 84 89 chr15 58521792 58521943 -44973031 + MLT1C LTR MaLR 74 234 -233 4 1031 796 275 18 0 chr15 58521943 58522161 -44972813 + ID_B1 SINE B4 1 222 -2 4 1031 348 127 0 0 chr15 58522161 58522216 -44972758 + (ATG)n Simple_repeat Simple_repeat 1 55 0 4 1031 311 296 84 89 chr15 58522216 58522300 -44972674 + MLT1C LTR MaLR 235 308 -159 4 1031 936 285 198 66 chr15 58522550 58523140 -44971834 + LTR65 LTR ERV1 1 668 -1 4 1031 225 281 171 57 chr15 58523532 58523691 -44971283 - L2c LINE L2 -238 3149 2960 5 1031 3524 33 0 0 chr15 58523691 58524087 -44970887 + MTA_Mm LTR MaLR 1 396 0 5 1031 225 328 195 39 chr15 58524087 58524348 -44970626 - L2c LINE L2 -458 2961 2666 5 1031 1091 90 11 17 chr15 58524373 58524398 -44970576 + (TTC)n Simple_repeat Simple_repeat 1 24 0 5 1031 1139 112 6 0 chr15 58524398 58524577 -44970397 + (TCC)n Simple_repeat Simple_repeat 1 180 0 5 1031 1091 90 11 17 chr15 58524577 58524732 -44970242 + (TTC)n Simple_repeat Simple_repeat 1 156 0 5 1031 234 208 0 0 chr15 58524741 58524794 -44970180 + CT-rich Low_complexity Low_complexity 2 54 0 5 1031 397 272 75 0 chr15 58524877 58525024 -44969950 - MIRb SINE MIR -79 189 32 5 1031 1281 189 33 40 chr15 58525064 58525339 -44969635 - RLTR46 LTR ERVK -5 315 43 5 1031 745 126 0 0 chr15 58525349 58525460 -44969514 - IAPEY3-int LTR ERVK 0 7581 7471 5 1031 2666 63 0 0 chr15 58525480 58525797 -44969177 - RLTR10-int LTR ERVK -188 1799 1483 5 1031 3357 143 2 89 chr15 58525796 58526438 -44968536 - IAPEY3-int LTR ERVK -147 7434 6849 5 1031 10673 207 5 6 chr15 58526457 58528666 -44966308 - IAPEY3-int LTR ERVK -1882 5699 3474 5 1031 1852 268 63 40 chr15 58528655 58529274 -44965700 - IAPEY3-int LTR ERVK -6513 1167 535 5 1031 470 258 30 110 chr15 58529270 58529470 -44965504 - IAPEY3-int LTR ERVK -7494 186 3 5 1031 1282 212 35 13 chr15 58529480 58529769 -44965205 - RLTR46 LTR ERVK -6 314 13 5 1031 427 312 28 21 chr15 58530300 58530441 -44964533 + LTR33 LTR ERVL 25 166 -349 6 1031 959 264 155 61 chr15 58530509 58531214 -44963760 + L1MC4 LINE L1 6893 7663 -379 6 1031 257 211 52 40 chr15 58531257 58531430 -44963544 + (TAGA)n Simple_repeat Simple_repeat 4 178 0 6 1031 328 268 23 23 chr15 58531452 58531582 -44963392 + L1MC4 LINE L1 7780 7909 -133 6 1031 385 290 132 69 chr15 58531602 58531776 -44963198 + B3 SINE B2 7 191 -25 6 1031 198 71 0 0 chr15 58532533 58532561 -44962413 + (TTG)n Simple_repeat Simple_repeat 3 30 0 6 1031 221 301 158 58 chr15 58532797 58532917 -44962057 + ID_B1 SINE B4 23 154 -70 6 1031 1008 128 14 0 chr15 58532918 58533066 -44961908 + B1_Mur4 SINE Alu 1 150 0 6 1031 259 261 117 75 chr15 58533249 58533369 -44961605 + MIRc SINE MIR 83 207 -61 6 1031 195 42 0 0 chr15 58533549 58533573 -44961401 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1031 606 205 0 0 chr15 58534367 58534619 -44960355 + (TG)n Simple_repeat Simple_repeat 1 252 0 6 1031 250 159 0 43 chr15 58535118 58535164 -44959810 + MERVK26-int LTR ERVK 6875 6918 -1 7 1031 2107 155 147 22 chr15 58535179 58535634 -44959340 + RMER13A LTR ERVK 14 525 -335 7 1031 572 274 64 10 chr15 58535623 58535826 -44959148 - RMER13A LTR ERVK -137 723 510 7 1031 3573 223 40 27 chr15 58535949 58536691 -44958283 + Lx6 LINE L1 6535 7286 -174 7 1031 184 301 68 0 chr15 58536947 58537020 -44957954 + MIR SINE MIR 155 232 -30 7 1031 552 218 0 0 chr15 58537152 58537285 -44957689 + (TG)n Simple_repeat Simple_repeat 1 133 0 7 1031 274 214 28 14 chr15 58538327 58538398 -44956576 - L2b LINE L2 -29 3346 3275 7 1031 272 321 12 0 chr15 58538591 58538672 -44956302 + ID4 SINE ID 2 83 0 7 1031 270 350 110 6 chr15 58538837 58539001 -44955973 - MIRb SINE MIR -32 236 56 7 1031 238 349 37 9 chr15 58539059 58539166 -44955808 + MIR SINE MIR 31 140 -68 7 1031 1425 78 5 5 chr15 58540137 58540329 -44954645 + B2_Mm1a SINE B2 2 193 0 7 1031 198 0 0 0 chr15 58540359 58540381 -44954593 + (TC)n Simple_repeat Simple_repeat 1 22 0 8 1031 28 29 0 0 chr15 58541587 58541622 -44953352 + AT_rich Low_complexity Low_complexity 1 35 0 8 1031 268 327 37 87 chr15 58541793 58542048 -44952926 + MLT1D LTR MaLR 1 244 -261 8 1031 500 219 82 182 chr15 58542191 58542615 -44952359 + RMER10A LTR ERVL 18 399 -43 8 1031 750 276 40 10 chr15 58542651 58542852 -44952122 + MLT1D LTR MaLR 299 505 0 8 1031 989 207 57 184 chr15 58542945 58543401 -44951573 + RMER10B LTR ERVL 1 398 0 8 1031 595 324 57 65 chr15 58543858 58544261 -44950713 - ERVL-E-int LTR ERVL -2919 2748 2349 8 1031 265 289 74 52 chr15 58544587 58544722 -44950252 - ERVL-E-int LTR ERVL -3731 1936 1799 8 1031 642 182 9 0 chr15 58544905 58545015 -44949959 + B1_Mur3 SINE Alu 1 111 -38 8 1031 207 0 0 0 chr15 58545072 58545095 -44949879 + (CAAAAA)n Simple_repeat Simple_repeat 3 25 0 8 1031 274 333 109 33 chr15 58546512 58546695 -44948279 - MIRb SINE MIR -59 209 13 8 1031 712 306 105 8 chr15 58547479 58547736 -44947238 - RMER15 LTR ERVL -16 559 278 8 1031 204 40 0 0 chr15 58547809 58547834 -44947140 + (GGATG)n Simple_repeat Simple_repeat 1 25 0 9 1031 1687 131 165 77 chr15 58548436 58548800 -44946174 + Lx4A LINE L1 6649 7044 -14 9 1031 240 35 0 0 chr15 58548800 58548829 -44946145 + (TAA)n Simple_repeat Simple_repeat 2 30 0 9 1031 243 0 0 0 chr15 58548878 58548905 -44946069 + (TTA)n Simple_repeat Simple_repeat 3 29 0 9 1031 2323 98 8 41 chr15 58548905 58549267 -44945707 - L1_Mus4 LINE L1 -17 6619 6270 9 1031 240 351 172 5 chr15 58551051 58551243 -44943731 + MIRb SINE MIR 45 268 0 9 1031 277 350 112 60 chr15 58551405 58551770 -44943204 - MLT1D LTR MaLR -117 388 5 9 1031 986 332 60 30 chr15 58551816 58552248 -44942726 + MT2A LTR ERVL 1 445 -88 9 1031 479 95 14 0 chr15 58552291 58552365 -44942609 + (TG)n Simple_repeat Simple_repeat 2 76 0 9 1031 2144 105 3 60 chr15 58552367 58552702 -44942272 - ORR1A3 LTR MaLR -10 316 1 9 1031 26 0 0 0 chr15 58553215 58553241 -44941733 + AT_rich Low_complexity Low_complexity 1 26 0 1 1031 532 284 85 52 chr15 58553467 58553864 -44941110 + MLT1D LTR MaLR 13 433 -72 1 1031 287 104 21 0 chr15 58553872 58553920 -44941054 + (GGGA)n Simple_repeat Simple_repeat 3 51 0 1 1031 199 333 53 0 chr15 58554126 58554201 -44940773 - MIR SINE MIR -149 113 35 1 1031 557 297 52 9 chr15 58554395 58554606 -44940368 - Charlie1a DNA MER1_type -256 1199 980 1 1031 299 234 50 107 chr15 58554623 58554887 -44940087 + L1MA4A LINE L1 5793 6035 -265 1 1031 2471 93 9 0 chr15 58554930 58555251 -44939723 + ORR1A3 LTR MaLR 1 324 -2 1 1031 842 268 67 25 chr15 58555352 58555635 -44939339 - Charlie1a DNA MER1_type -705 750 456 1 1031 806 142 28 21 chr15 58556506 58556650 -44938324 - B1_Mus2 SINE Alu -2 145 1 1 1031 285 342 41 16 chr15 58556687 58556809 -44938165 - Charlie1a DNA MER1_type -1221 234 110 1 1031 213 328 0 0 chr15 58558007 58558065 -44936909 + MIRm SINE MIR 78 135 -141 1 1031 196 30 61 0 chr15 58558090 58558123 -44936851 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1031 1683 161 111 38 chr15 58558709 58559051 -44935923 + ORR1B2 LTR MaLR 1 367 0 1 1031 383 208 76 152 chr15 58559109 58559307 -44935667 - MTEb LTR MaLR 0 379 197 1 1031 312 111 0 0 chr15 58559409 58559463 -44935511 + (ATG)n Simple_repeat Simple_repeat 3 56 0 1 1031 351 0 0 0 chr15 58559634 58559673 -44935301 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1031 523 358 78 45 chr15 58559730 58560061 -44934913 + MLT2F LTR ERVL 269 610 -53 1 1031 321 354 65 46 chr15 58560428 58560644 -44934330 + MIRb SINE MIR 28 247 -15 1 1031 528 68 0 0 chr15 58560655 58560728 -44934246 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 1031 387 113 0 0 chr15 58560829 58560891 -44934083 + (TGGA)n Simple_repeat Simple_repeat 2 63 0 1 1031 233 310 57 48 chr15 58561376 58561481 -44933493 + MIRb SINE MIR 14 119 -149 1 1031 542 256 149 43 chr15 58561685 58561873 -44933101 + MIR SINE MIR 18 225 -37 1 1031 1825 156 18 103 chr15 58562465 58562852 -44932122 - ORR1B1 LTR MaLR 0 394 41 1 1031 209 362 0 70 chr15 58563749 58563835 -44931139 - MIRc SINE MIR -100 168 89 1 1031 291 343 63 21 chr15 58565227 58565370 -44929604 + MIR SINE MIR 33 181 -81 1 1031 344 263 92 72 chr15 58565539 58565725 -44929249 + RMER15 LTR ERVL 336 558 -17 1 1031 333 324 34 55 chr15 58566251 58566489 -44928485 + MIRb SINE MIR 10 242 -26 1 1031 387 203 75 0 chr15 58566581 58566769 -44928205 - Lx9 LINE L1 0 7644 7417 1 1031 2308 198 52 25 chr15 58566766 58567247 -44927727 + Lx9 LINE L1 6902 7395 -249 1 1031 21 0 0 0 chr15 58567450 58567471 -44927503 + AT_rich Low_complexity Low_complexity 1 21 0 1 1031 518 0 16 0 chr15 58567587 58567649 -44927325 + (TAGA)n Simple_repeat Simple_repeat 2 64 0 1 1031 279 0 0 0 chr15 58567658 58567689 -44927285 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1031 354 45 0 0 chr15 58567689 58567732 -44927242 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1031 344 243 0 0 chr15 58567893 58567963 -44927011 - ID2 SINE ID -13 70 1 1 1031 1161 196 23 0 chr15 58567988 58568207 -44926767 + ID_B1 SINE B4 1 224 0 1 1031 189 0 0 0 chr15 58568286 58568307 -44926667 + (CTACT)n Simple_repeat Simple_repeat 3 23 0 1 1031 840 169 35 0 chr15 58568447 58568589 -44926385 + B1_Mur3 SINE Alu 3 149 0 1 1031 255 31 0 0 chr15 58568793 58568825 -44926149 + (GA)n Simple_repeat Simple_repeat 2 33 0 1 1031 182 254 104 78 chr15 58568856 58568933 -44926041 - MIR SINE MIR -165 97 19 1 1031 184 377 29 0 chr15 58569809 58569878 -44925096 - MIRm SINE MIR -1 275 205 1 1031 4733 87 75 34 chr15 58570076 58570853 -44924121 + RMER17D2 LTR ERVK 1 809 0 1 1031 2084 136 47 15 chr15 58570854 58571197 -44923777 - ORR1B1 LTR MaLR 0 394 41 1 1031 1941 152 19 17 chr15 58571404 58571782 -44923192 - MTC LTR MaLR 0 421 24 1 1031 324 0 0 0 chr15 58571782 58571818 -44923156 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1031 434 229 113 0 chr15 58571822 58571975 -44922999 + L1M2 LINE L1 5603 5781 -519 1 1031 182 372 26 0 chr15 58572308 58572386 -44922588 + MIRb SINE MIR 118 197 -71 1 1031 254 294 23 34 chr15 58572413 58572501 -44922473 - L2a LINE L2 -25 3401 3315 1 1031 215 0 0 62 chr15 58573042 58573074 -44921900 + (TTTTTA)n Simple_repeat Simple_repeat 2 31 0 1 1031 236 326 93 0 chr15 58573493 58573579 -44921395 + LTR33 LTR ERVL 276 369 -146 1 1031 200 327 75 0 chr15 58574975 58575082 -44919892 - MIR SINE MIR -81 181 67 1 1031 241 283 17 0 chr15 58576092 58576152 -44918822 + CT-rich Low_complexity Low_complexity 1 61 0 1 1031 703 258 30 56 chr15 58576707 58576904 -44918070 + B3A SINE B2 2 193 -5 1 1031 426 250 162 64 chr15 58579076 58579305 -44915669 - RLTR11B LTR ERVK 0 453 201 1 1031 3042 129 43 8 chr15 58579305 58579811 -44915163 + RLTR28 LTR ERVL 1 524 0 1 1031 351 150 0 0 chr15 58579817 58579877 -44915097 + (TCC)n Simple_repeat Simple_repeat 1 60 0 1 1031 885 257 14 0 chr15 58579878 58580088 -44914886 - ID_B1 SINE B4 -11 213 1 1 1031 1221 55 0 0 chr15 58580206 58580352 -44914622 + B1_Mus2 SINE Alu 1 146 -1 1 1031 351 0 0 0 chr15 58580364 58580403 -44914571 + (GAA)n Simple_repeat Simple_repeat 1 39 0 1 1031 1008 48 0 0 chr15 58580403 58580529 -44914445 + (AGGGGG)n Simple_repeat Simple_repeat 5 130 0 1 1031 186 266 76 30 chr15 58581187 58581253 -44913721 - MER5A DNA MER1_type -3 186 118 1 1031 393 110 0 0 chr15 58581349 58581422 -44913552 + (CAGA)n Simple_repeat Simple_repeat 2 74 0 1 1031 833 103 16 0 chr15 58581567 58581693 -44913281 + URR1B DNA MER1_type 98 225 0 1 1031 342 0 0 0 chr15 58581886 58581924 -44913050 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1031 267 266 48 60 chr15 58582210 58582294 -44912680 + MIRb SINE MIR 15 103 -165 1 1031 548 298 32 0 chr15 58582320 58582478 -44912496 + RSINE1 SINE B4 1 163 -2 1 1031 272 122 0 0 chr15 58582478 58582519 -44912455 + MT2A LTR ERVL 493 533 0 1 1031 212 331 87 33 chr15 58582539 58582659 -44912315 + L2c LINE L2 2940 3069 -357 1 1031 3265 63 2 2 chr15 58582659 58583059 -44911915 - MTB LTR MaLR 0 400 1 1 1031 212 331 87 33 chr15 58583059 58583088 -44911886 + L2c LINE L2 3070 3096 -330 1 1031 195 328 0 0 chr15 58583127 58583194 -44911780 + L2 LINE L2 2713 2779 -640 1 1031 250 268 28 0 chr15 58583351 58583422 -44911552 - BLACKJACK DNA AcHobo 0 2944 2872 1 1031 296 283 54 0 chr15 58583466 58583558 -44911416 + L2c LINE L2 3272 3368 -19 1 1031 196 270 0 0 chr15 58583525 58583562 -44911412 + MIRb SINE MIR 221 257 -11 1 1031 306 0 0 0 chr15 58583812 58583846 -44911128 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1031 561 275 61 8 chr15 58583846 58583978 -44910996 - RSINE1 SINE B4 -25 140 2 1 1031 311 253 70 17 chr15 58584139 58584261 -44910713 - ORR1E LTR MaLR -10 369 244 1 1031 272 255 57 113 chr15 58584234 58584340 -44910634 + B2_Mm2 SINE B2 27 126 -69 1 1031 2334 148 168 72 chr15 58584367 58584892 -44910082 - RMER15 LTR ERVL 0 575 1 1 1031 414 0 0 0 chr15 58584895 58584941 -44910033 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1031 776 276 57 10 chr15 58584956 58585150 -44909824 - ORR1E LTR MaLR -82 277 75 1 1031 720 270 142 8 chr15 58585941 58586180 -44908794 - B4A SINE B4 -21 271 1 1 1031 213 274 119 42 chr15 58586687 58586805 -44908169 - MER91C DNA Tip100 -1 139 13 1 1031 606 259 113 5 chr15 58587235 58587448 -44907526 + Lx7 LINE L1 7139 7374 -322 1 1031 216 208 19 19 chr15 58587480 58587534 -44907440 + CT-rich Low_complexity Low_complexity 1 54 0 1 1031 777 258 148 109 chr15 58587955 58588351 -44906623 + MTE2a LTR MaLR 8 419 0 1 1031 488 250 139 108 chr15 58588586 58588873 -44906101 - RMER15 LTR ERVL -90 485 190 1 1032 344 333 30 22 chr15 58589775 58589910 -44905064 - MIRb SINE MIR -73 195 60 1 1032 721 245 139 56 chr15 58590515 58590713 -44904261 + B4 SINE B4 1 220 -72 1 1032 1433 73 5 16 chr15 58590713 58590907 -44904067 + B2_Mm1t SINE B2 1 192 -1 1 1032 721 245 139 56 chr15 58590907 58590953 -44904021 + B4 SINE B4 221 266 -26 1 1032 549 90 0 0 chr15 58590953 58591042 -44903932 + (CA)n Simple_repeat Simple_repeat 1 89 0 1 1032 195 382 40 0 chr15 58591317 58591393 -44903581 + L2b LINE L2 3098 3176 -199 1 1032 276 265 84 47 chr15 58592273 58592439 -44902535 + MIR3 SINE MIR 10 183 -79 1 1032 342 0 0 0 chr15 58592586 58592624 -44902350 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1032 300 230 173 53 chr15 58592624 58592757 -44902217 + MER46C DNA MER2_type 81 229 -109 1 1032 802 297 74 16 chr15 58593269 58593580 -44901394 + ORR1E LTR MaLR 25 353 -6 1 1032 295 246 177 50 chr15 58594209 58594350 -44900624 + MTEa LTR MaLR 2 160 -219 1 1032 296 286 215 31 chr15 58594430 58594560 -44900414 + RSINE1 SINE B4 4 157 -8 1 1032 383 38 0 19 chr15 58594564 58594618 -44900356 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1032 689 280 47 82 chr15 58594651 58594690 -44900284 + MT2A LTR ERVL 168 209 -324 1 1032 2230 51 7 0 chr15 58594690 58594963 -44900011 - L1Md_F2 LINE L1 0 6582 6308 1 1032 689 280 47 82 chr15 58594963 58594997 -44899977 + MT2A LTR ERVL 210 245 -288 1 1032 243 0 0 0 chr15 58594997 58595024 -44899950 + (CTG)n Simple_repeat Simple_repeat 1 27 0 1 1032 689 280 47 82 chr15 58595024 58595268 -44899706 + MT2A LTR ERVL 246 475 -58 1 1032 271 100 0 0 chr15 58595465 58595505 -44899469 - MTC LTR MaLR 0 421 382 1 1032 4884 68 8 2 chr15 58595515 58596135 -44898839 + L1_Mus3 LINE L1 6003 6626 -12 1 1032 375 23 0 0 chr15 58596203 58596247 -44898727 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 1 1032 2231 146 49 15 chr15 58596269 58596659 -44898315 - MTC LTR MaLR 0 421 19 1 1032 1114 223 34 4 chr15 58596762 58597001 -44897973 + RLTR42-int LTR ERVK 1105 1350 -4172 1 1032 180 77 0 0 chr15 58597001 58597027 -44897947 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1 1032 1279 30 0 123 chr15 58597027 58597214 -44897760 - B2_Mm1a SINE B2 -28 165 2 2 1032 1192 49 14 0 chr15 58597332 58597476 -44897498 + B1_Mus2 SINE Alu 1 146 -1 2 1032 525 195 34 176 chr15 58597862 58598023 -44896951 + RLTR19-int LTR ERVK 3524 3665 -2472 2 1032 1461 64 21 0 chr15 58598023 58598210 -44896764 + B2_Mm2 SINE B2 1 191 -4 2 1032 525 195 34 176 chr15 58598210 58598253 -44896721 + RLTR19-int LTR ERVK 3666 3699 -2438 2 1032 255 259 0 0 chr15 58598258 58598343 -44896631 + (TA)n Simple_repeat Simple_repeat 2 86 0 2 1032 398 20 20 0 chr15 58598352 58598403 -44896571 + (GA)n Simple_repeat Simple_repeat 2 53 0 2 1032 462 143 0 0 chr15 58598665 58598735 -44896239 + RLTR19-int LTR ERVK 4039 4108 -2029 2 1032 447 52 0 0 chr15 58599652 58599710 -44895264 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 1032 458 83 0 14 chr15 58600678 58600751 -44894223 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 1032 243 204 0 0 chr15 58600800 58600854 -44894120 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1032 393 308 38 19 chr15 58601023 58601182 -44893792 - RSINE1 SINE B4 -2 163 2 2 1032 282 278 0 0 chr15 58601269 58601377 -44893597 + (CA)n Simple_repeat Simple_repeat 1 108 0 2 1032 342 67 0 0 chr15 58601885 58601930 -44893044 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 1032 315 325 43 61 chr15 58602681 58602845 -44892129 - MLT1H-int LTR MaLR -4 1485 1325 2 1032 881 289 51 16 chr15 58602924 58603177 -44891797 + B4 SINE B4 1 262 -30 2 1032 204 125 0 0 chr15 58603177 58603209 -44891765 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1032 180 0 0 0 chr15 58603217 58603237 -44891737 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 1032 368 307 162 53 chr15 58603237 58603504 -44891470 - MLT1H-int LTR MaLR -340 1149 867 2 1032 245 277 17 13 chr15 58603501 58603579 -44891395 - ID4 SINE ID -1 82 4 2 1032 436 210 87 16 chr15 58603595 58603721 -44891253 - B1F1 SINE Alu -8 141 7 2 1032 806 296 155 57 chr15 58603723 58603975 -44890999 - MLT1H-int LTR MaLR -651 758 474 2 1032 477 0 0 0 chr15 58603975 58604028 -44890946 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1032 806 296 155 57 chr15 58604028 58604316 -44890658 - MLT1H-int LTR MaLR -936 473 165 2 1032 180 200 0 0 chr15 58604444 58604484 -44890490 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1032 1235 256 49 27 chr15 58606043 58606409 -44888565 + ORR1D1 LTR MaLR 1 374 0 2 1032 917 99 42 14 chr15 58606729 58606873 -44888101 + B1_Mur4 SINE Alu 3 150 0 2 1032 1229 54 0 0 chr15 58607024 58607171 -44887803 - B1_Mm SINE Alu 0 147 1 2 1032 359 319 40 47 chr15 58607750 58607898 -44887076 + B1F SINE Alu 2 148 -1 2 1032 335 237 110 30 chr15 58607913 58608013 -44886961 + PB1D10 SINE Alu 3 110 -7 2 1032 376 286 82 48 chr15 58608024 58608171 -44886803 + L1M5 LINE L1 3866 4017 -2129 2 1032 702 291 173 18 chr15 58608900 58609177 -44885797 - MLT1E2 LTR MaLR -59 568 249 2 1032 356 374 72 42 chr15 58610129 58610394 -44884580 + MLT1J LTR MaLR 227 499 -13 2 1032 311 275 103 55 chr15 58610416 58610562 -44884412 + Charlie1a DNA MER1_type 4 156 -1299 2 1032 305 274 12 12 chr15 58610653 58610738 -44884236 + GA-rich Low_complexity Low_complexity 1 85 0 2 1032 593 193 144 22 chr15 58610850 58611030 -44883944 + Charlie1a DNA MER1_type 1019 1220 -235 2 1032 585 175 165 8 chr15 58611460 58611587 -44883387 - B1_Mur1 SINE Alu -1 148 2 2 1032 286 89 22 0 chr15 58612245 58612290 -44882684 + B2_Mm2 SINE B2 109 154 -41 2 1032 197 237 34 146 chr15 58612441 58612530 -44882444 + L2a LINE L2 3254 3332 -94 2 1032 308 323 104 0 chr15 58612538 58612634 -44882340 + PB1D9 SINE Alu 10 115 -5 2 1032 192 307 107 19 chr15 58612945 58613048 -44881926 + MIRb SINE MIR 115 226 -42 2 1032 330 316 9 17 chr15 58613403 58613519 -44881455 + Lx8 LINE L1 7213 7327 -146 2 1032 324 0 0 0 chr15 58615230 58615266 -44879708 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1032 21 0 0 0 chr15 58615597 58615618 -44879356 + AT_rich Low_complexity Low_complexity 1 21 0 2 1032 192 40 0 0 chr15 58616150 58616175 -44878799 + (CAGTA)n Simple_repeat Simple_repeat 1 25 0 2 1032 731 287 34 6 chr15 58617476 58617651 -44877323 - B3A SINE B2 -18 180 1 2 1032 281 344 69 23 chr15 58617661 58617792 -44877182 - L2b LINE L2 -1 3374 3238 2 1032 245 111 44 0 chr15 58619022 58619067 -44875907 + (CATA)n Simple_repeat Simple_repeat 2 48 0 2 1032 301 280 73 41 chr15 58619197 58619320 -44875654 - MER104 DNA Tc2 -19 162 36 2 1032 2910 72 26 5 chr15 58619703 58620093 -44874881 + L1_Mus3 LINE L1 6235 6632 -6 2 1032 218 191 44 0 chr15 58621943 58622011 -44872963 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 1032 1667 52 0 5 chr15 58622136 58622331 -44872643 - B2_Mm2 SINE B2 0 195 2 2 1032 229 258 30 15 chr15 58623259 58623326 -44871648 + tRNA-Ala-GCY_ tRNA tRNA 4 71 -4 2 1032 473 220 76 8 chr15 58623361 58623480 -44871494 + B2_Mm2 SINE B2 69 195 0 2 1032 28 29 0 0 chr15 58623529 58623564 -44871410 + AT_rich Low_complexity Low_complexity 1 35 0 2 1032 397 152 0 70 chr15 58629146 58629217 -44865757 - PB1D10 SINE Alu -1 116 51 2 1032 748 113 9 0 chr15 58630172 58630278 -44864696 + B2_Mm1t SINE B2 2 108 -85 2 1032 274 359 0 0 chr15 58630329 58630432 -44864542 + GA-rich Low_complexity Low_complexity 1 103 0 2 1032 219 339 0 0 chr15 58630472 58630537 -44864437 + ID2 SINE ID 3 67 -16 2 1032 24 32 0 0 chr15 58630608 58630639 -44864335 + AT_rich Low_complexity Low_complexity 1 31 0 2 1032 554 215 223 17 chr15 58630671 58630755 -44864219 + B3 SINE B2 1 108 -108 2 1032 207 0 0 0 chr15 58630755 58630778 -44864196 + (C)n Simple_repeat Simple_repeat 1 23 0 2 1032 554 215 223 17 chr15 58630778 58630868 -44864106 + B3 SINE B2 109 210 -6 2 1032 30 59 0 0 chr15 58631211 58631262 -44863712 + AT_rich Low_complexity Low_complexity 1 51 0 2 1032 363 213 59 92 chr15 58631731 58631850 -44863124 + PB1D9 SINE Alu 5 119 -1 2 1032 568 103 0 11 chr15 58631871 58631959 -44863015 + PB1D9 SINE Alu 34 120 0 2 1032 387 0 0 0 chr15 58632674 58632717 -44862257 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1032 6544 68 4 1 chr15 58632903 58633703 -44861271 + L1_Mus3 LINE L1 5825 6626 -12 2 1032 956 194 19 19 chr15 58634789 58634994 -44859980 - L1Md_F3 LINE L1 -2 6582 6378 2 1032 22 0 0 0 chr15 58635689 58635711 -44859263 + AT_rich Low_complexity Low_complexity 1 22 0 2 1032 441 0 0 0 chr15 58635819 58635868 -44859106 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1032 246 128 0 0 chr15 58638969 58639008 -44855966 + (CAA)n Simple_repeat Simple_repeat 2 40 0 2 1032 339 277 60 43 chr15 58639085 58639202 -44855772 + B1F SINE Alu 30 148 -1 2 1032 252 0 0 0 chr15 58639297 58639325 -44855649 + (CTTG)n Simple_repeat Simple_repeat 3 30 0 2 1032 387 296 46 0 chr15 58639325 58639433 -44855541 - PB1 SINE Alu -11 116 4 2 1032 825 266 66 82 chr15 58639441 58639760 -44855214 - Tigger6b DNA MER2_type -1228 369 56 2 1032 233 319 137 25 chr15 58640550 58640711 -44854263 + L1MC4 LINE L1 6472 6650 -1392 2 1032 201 154 0 0 chr15 58640712 58640751 -44854223 + (CAGAGA)n Simple_repeat Simple_repeat 6 44 0 2 1032 2988 254 137 8 chr15 58641034 58641999 -44852975 - Lx8 LINE L1 -78 7395 6307 2 1032 293 297 0 13 chr15 58642252 58642327 -44852647 + LTR16A LTR ERVL 377 450 -1 2 1032 1205 222 140 82 chr15 58644058 58644649 -44850325 + RCHARR1 DNA MER1_type 248 968 -6 2 1032 624 241 40 110 chr15 58644870 58645098 -44849876 - B3 SINE B2 -4 212 1 2 1032 1116 129 215 0 chr15 58646423 58646609 -44848365 + URR1A DNA MER1_type 1 226 0 2 1032 235 269 86 43 chr15 58646964 58647034 -44847940 + PB1D10 SINE Alu 2 74 -43 2 1032 205 288 127 28 chr15 58647184 58647348 -44847626 + MIRb SINE MIR 37 219 -49 2 1032 473 333 42 37 chr15 58649084 58649274 -44845700 + MER20 DNA MER1_type 29 219 0 2 1032 629 349 28 62 chr15 58649482 58649586 -44845388 + MLT1H1 LTR MaLR 65 161 -394 2 1032 969 207 141 168 chr15 58649586 58650103 -44844871 + MLT1D LTR MaLR 3 505 0 2 1032 629 349 41 67 chr15 58650103 58650368 -44844606 + MLT1H1 LTR MaLR 162 441 -150 2 1032 789 188 33 13 chr15 58650878 58651029 -44843945 - U1 snRNA snRNA -7 158 5 2 1032 313 325 100 0 chr15 58651278 58651398 -44843576 + MLT1H1 LTR MaLR 363 494 -75 2 1032 544 286 32 45 chr15 58652118 58652272 -44842702 + RSINE1 SINE B4 8 159 -6 2 1032 203 0 0 36 chr15 58654930 58654958 -44840016 + (CGGG)n Simple_repeat Simple_repeat 4 30 0 2 1032 222 307 13 0 chr15 58655835 58655910 -44839064 + L2c LINE L2 3082 3157 -230 2 1032 533 184 70 0 chr15 58656184 58656298 -44838676 + MER2 DNA MER2_type 103 224 -121 2 1032 385 332 46 89 chr15 58656394 58656675 -44838299 + MT2A LTR ERVL 102 370 -163 2 1032 186 43 0 0 chr15 58656701 58656724 -44838250 + (G)n Simple_repeat Simple_repeat 1 23 0 2 1032 2059 206 95 34 chr15 58656726 58657269 -44837705 - RLTR18 LTR ERVK -82 534 23 2 1032 324 0 0 0 chr15 58657339 58657375 -44837599 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1032 298 289 6 134 chr15 58657408 58657572 -44837402 - YREP_Mm Unknown Unknown -1475 337 195 2 1032 640 248 0 8 chr15 58657447 58657573 -44837401 + ID_B1 SINE B4 81 205 -19 2 1032 1135 103 0 0 chr15 58657584 58657729 -44837245 + B1_Mus1 SINE Alu 4 148 0 2 1032 1937 112 0 66 chr15 58657745 58658050 -44836924 + ORR1A2 LTR MaLR 1 285 -42 2 1032 1796 94 0 0 chr15 58658066 58658320 -44836654 - ORR1A3-int LTR MaLR -1708 255 2 2 1032 334 65 0 61 chr15 58658320 58658369 -44836605 - ORR1A3 LTR MaLR -7 319 274 2 1032 1738 96 0 0 chr15 58658369 58658599 -44836375 - MERVL-int LTR ERVL -1628 3857 3628 2 1032 1835 82 193 0 chr15 58658599 58658879 -44836095 - MT2B2 LTR ERVL -250 334 1 2 1032 395 299 50 36 chr15 58658901 58659040 -44835934 + MLT1H2 LTR MaLR 2 142 -347 2 1032 1973 119 0 20 chr15 58659248 58659549 -44835425 + ORR1A1 LTR MaLR 3 297 -49 2 1032 381 229 0 28 chr15 58659624 58659696 -44835278 + ID4_ SINE ID 3 72 -11 2 1032 376 311 152 67 chr15 58660073 58660438 -44834536 - MLT1F LTR MaLR -86 462 67 3 1032 479 264 84 132 chr15 58660440 58660794 -44834180 - ORR1E LTR MaLR -11 359 33 3 1032 313 273 19 83 chr15 58660792 58660900 -44834074 - ORR1E LTR MaLR -270 109 9 3 1032 207 0 0 0 chr15 58660987 58661010 -44833964 + (GCTG)n Simple_repeat Simple_repeat 1 23 0 3 1032 258 259 129 27 chr15 58661107 58661254 -44833720 + MLT1H2 LTR MaLR 207 368 -180 2 1032 237 312 47 60 chr15 58661677 58661827 -44833147 + HAL1b LINE L1 1862 2009 0 3 1032 295 313 72 58 chr15 58662050 58662189 -44832785 + B4A SINE B4 152 292 0 3 1032 180 0 0 0 chr15 58662513 58662533 -44832441 + (CA)n Simple_repeat Simple_repeat 2 21 0 3 1032 243 385 0 46 chr15 58663691 58663703 -44831271 + ID SINE ID 76 82 -142 3 1032 350 382 0 0 chr15 58663703 58663813 -44831161 + PB1D10 SINE Alu 3 112 -5 3 1032 358 255 181 29 chr15 58663940 58664190 -44830784 + Lx9 LINE L1 7237 7617 -27 3 1032 1984 223 78 44 chr15 58664289 58664829 -44830145 + RLTR18 LTR ERVK 1 558 -58 3 1032 35681 70 14 2 chr15 58665273 58671401 -44823573 - L1Md_F2 LINE L1 -13 6569 363 3 1032 195 100 0 0 chr15 58671420 58671450 -44823524 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1032 318 320 65 57 chr15 58671614 58671859 -44823115 + RMER2 LTR ERV1 294 540 -27 3 1032 741 313 101 25 chr15 58672257 58672575 -44822399 + MER21B LTR ERV1 287 628 -235 3 1032 486 184 136 76 chr15 58672683 58672801 -44822173 - Lx8 LINE L1 -326 7147 7023 3 1032 279 336 36 43 chr15 58673562 58673702 -44821272 + MIRc SINE MIR 36 174 -94 3 1032 189 74 0 0 chr15 58674244 58674271 -44820703 + (ATG)n Simple_repeat Simple_repeat 3 29 0 3 1032 384 304 39 34 chr15 58674299 58674515 -44820459 - MIR SINE MIR -36 232 13 3 1032 288 324 62 7 chr15 58675242 58675388 -44819586 + L2 LINE L2 1047 1200 -2219 3 1032 1546 233 94 73 chr15 58675551 58676494 -44818480 - RMER17B LTR ERVK -9 899 1 3 1032 207 318 37 9 chr15 58676633 58676741 -44818233 + L2 LINE L2 1885 1995 -1424 3 1032 254 125 0 0 chr15 58676764 58676804 -44818170 + MLT2B2 LTR ERVL 1 40 -475 3 1032 394 304 9 0 chr15 58676797 58676912 -44818062 + MLT2B2 LTR ERVL 396 511 -51 3 1032 248 259 0 0 chr15 58677040 58677094 -44817880 + MLT2B2 LTR ERVL 511 564 -3 3 1032 1129 51 0 0 chr15 58677131 58677268 -44817706 - B1_Mus1 SINE Alu -9 139 3 3 1032 198 103 0 0 chr15 58677851 58677880 -44817094 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 1032 184 290 85 11 chr15 58679089 58679183 -44815791 + MIRb SINE MIR 126 226 -42 3 1032 882 166 191 11 chr15 58679205 58679388 -44815586 - B3 SINE B2 0 216 1 3 1032 558 285 38 6 chr15 58680139 58680298 -44814676 - B3A SINE B2 -32 166 3 3 1032 21 36 0 0 chr15 58680305 58680333 -44814641 + AT_rich Low_complexity Low_complexity 1 28 0 3 1032 3423 145 122 96 chr15 58681262 58682129 -44812845 - RMER19B LTR ERVK -12 890 1 3 1032 493 285 187 20 chr15 58682672 58682966 -44812008 + MER21B LTR ERV1 465 807 -56 3 1032 181 121 30 0 chr15 58683072 58683105 -44811869 - L2c LINE L2 -65 3322 3289 3 1032 195 69 0 0 chr15 58683497 58683526 -44811448 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 1032 191 61 0 29 chr15 58683526 58683560 -44811414 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 1032 22 0 0 0 chr15 58683633 58683655 -44811319 + AT_rich Low_complexity Low_complexity 1 22 0 3 1032 315 0 0 0 chr15 58683711 58683746 -44811228 + (GA)n Simple_repeat Simple_repeat 1 35 0 3 1032 415 227 145 17 chr15 58683933 58684112 -44810862 + RMER10A LTR ERVL 241 442 0 3 1032 1284 282 112 62 chr15 58684496 58685267 -44809707 + RMER13A LTR ERVK 2 810 -50 3 1032 651 146 33 11 chr15 58685508 58685638 -44809336 - B1_Mus2 SINE Alu -6 141 11 3 1032 697 321 63 23 chr15 58686081 58686511 -44808463 - L1M5 LINE L1 -401 5763 5317 3 1032 259 244 16 59 chr15 58686706 58686893 -44808081 + T-rich Low_complexity Low_complexity 1 179 0 3 1032 282 361 108 5 chr15 58687264 58687478 -44807496 - L1M5 LINE L1 -1494 4652 4417 3 1032 655 82 418 43 chr15 58687660 58687801 -44807173 - B2_Mm2 SINE B2 0 195 2 3 1032 264 243 28 14 chr15 58688155 58688226 -44806748 + ID_B1 SINE B4 142 213 -11 3 1032 259 253 60 12 chr15 58688226 58688237 -44806737 + B1F1 SINE Alu 64 149 0 3 1032 748 248 103 126 chr15 58688305 58688355 -44806619 - MTE2a LTR MaLR 0 379 340 3 1032 1369 113 0 5 chr15 58688355 58688551 -44806423 + B2_Mm2 SINE B2 1 195 0 3 1032 748 248 103 126 chr15 58688551 58688888 -44806086 - MTE2a LTR MaLR -40 339 1 3 1032 929 169 141 0 chr15 58689107 58689291 -44805683 + B3 SINE B2 1 210 -6 3 1032 720 172 0 0 chr15 58689587 58689715 -44805259 + B1_Mur4 SINE Alu 2 129 -21 3 1032 423 0 0 0 chr15 58689718 58689765 -44805209 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 1032 2049 199 114 32 chr15 58690259 58690720 -44804254 + RMER2 LTR ERV1 1 507 -60 3 1032 3672 95 82 2 chr15 58690720 58691245 -44803729 + RMER2 LTR ERV1 1 567 0 3 1032 2049 199 114 32 chr15 58691245 58691307 -44803667 + RMER2 LTR ERV1 508 567 0 3 1032 822 285 70 39 chr15 58691495 58691853 -44803121 - ORR1D2 LTR MaLR 0 370 2 3 1032 406 256 138 69 chr15 58692370 58692559 -44802415 + L1M2 LINE L1 5390 5591 -709 3 1032 633 235 89 72 chr15 58692559 58692950 -44802024 - RMER16 LTR ERVK 0 533 1 3 1032 333 311 62 52 chr15 58692951 58693068 -44801906 + L1M2 LINE L1 5587 5703 -468 3 1032 2905 38 9 0 chr15 58693068 58693411 -44801563 - ORR1A1 LTR MaLR 0 346 1 3 1032 333 311 62 52 chr15 58693411 58693503 -44801471 + L1M2 LINE L1 5704 5798 -373 3 1032 1650 230 83 65 chr15 58693912 58694469 -44800505 - RMER2 LTR ERV1 0 567 1 3 1032 354 367 8 8 chr15 58694888 58695017 -44799957 - MLT1C LTR MaLR -7 460 332 3 1032 315 248 154 9 chr15 58695129 58695239 -44799735 - MLT1C LTR MaLR -289 178 53 3 1032 501 71 0 0 chr15 58695760 58695830 -44799144 + (TG)n Simple_repeat Simple_repeat 2 71 0 3 1032 249 313 0 0 chr15 58696377 58696444 -44798530 - B4A SINE B4 -218 74 8 3 1032 1408 89 11 0 chr15 58697021 58697212 -44797762 - B2_Mm1t SINE B2 0 193 1 3 1032 1432 173 72 156 chr15 58697212 58697616 -44797358 - ORR1D1 LTR MaLR -4 370 1 3 1032 1658 132 250 8 chr15 58698412 58698881 -44796093 + RLTR33 LTR ERVK 1 678 0 3 1032 1574 151 161 55 chr15 58698931 58699278 -44795696 - ORR1B1 LTR MaLR -8 386 3 3 1032 454 317 38 16 chr15 58700129 58700316 -44794658 + B3A SINE B2 7 190 -5 3 1032 1047 325 47 41 chr15 58700385 58700850 -44794124 - Arthur1 DNA Tip100 -3453 494 27 3 1032 517 180 0 0 chr15 58700867 58700956 -44794018 + B1_Mur3 SINE Alu 9 97 -52 3 1032 270 0 0 0 chr15 58701433 58701463 -44793511 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1032 243 0 0 0 chr15 58702199 58702226 -44792748 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 1032 486 0 0 0 chr15 58702226 58702279 -44792695 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 1032 242 220 0 0 chr15 58702400 58702450 -44792524 - ID4_ SINE ID -13 70 21 3 1032 808 276 25 47 chr15 58702490 58702764 -44792210 + L1M4 LINE L1 2638 2905 -3241 3 1032 530 289 7 32 chr15 58703389 58703543 -44791431 + RSINE1 SINE B4 3 152 -13 3 1032 370 158 59 35 chr15 58703631 58703716 -44791258 - RSINE1 SINE B4 -68 97 11 3 1032 228 242 43 57 chr15 58706357 58706427 -44788547 + B4A SINE B4 81 149 -143 3 1032 458 240 0 59 chr15 58706378 58706480 -44788494 + PB1D7 SINE Alu 17 112 -8 3 1032 213 295 45 45 chr15 58707311 58707421 -44787553 - L2c LINE L2 -6 3381 3272 3 1032 388 147 15 0 chr15 58708105 58708173 -44786801 + RLTR11A LTR ERVK 460 528 0 3 1032 721 156 55 0 chr15 58708879 58709007 -44785967 + B1_Mur2 SINE Alu 15 149 0 3 1032 316 257 28 65 chr15 58709208 58709316 -44785658 + PB1D10 SINE Alu 6 109 -8 3 1032 275 282 100 25 chr15 58709444 58709524 -44785450 - PB1D10 SINE Alu -31 86 1 3 1032 335 296 97 74 chr15 58709554 58709729 -44785245 + B4A SINE B4 8 186 -106 3 1032 296 260 52 0 chr15 58709740 58709817 -44785157 + RSINE1 SINE B4 84 164 -1 3 1032 326 296 43 29 chr15 58710072 58710211 -44784763 - L1MEc LINE L1 -6121 279 139 3 1032 267 358 9 0 chr15 58710909 58711018 -44783956 + HERV16-int LTR ERVL 2581 2690 -2306 3 1032 836 204 95 148 chr15 58712096 58712194 -44782780 + ORR1D1 LTR MaLR 75 143 -231 3 1032 1208 54 0 0 chr15 58712194 58712341 -44782633 - B1_Mus2 SINE Alu 0 147 1 3 1032 836 204 95 148 chr15 58712341 58712491 -44782483 + ORR1D1 LTR MaLR 144 308 -66 3 1032 1124 87 131 17 chr15 58712491 58712666 -44782308 - B2_Mm2 SINE B2 0 195 1 3 1032 836 204 95 148 chr15 58712666 58712733 -44782241 + ORR1D1 LTR MaLR 309 374 0 3 1032 320 0 25 0 chr15 58712887 58712927 -44782047 + (TAA)n Simple_repeat Simple_repeat 1 41 0 3 1032 241 327 97 18 chr15 58713144 58713309 -44781665 + L1M4 LINE L1 46 223 -6319 3 1032 319 230 85 18 chr15 58713377 58713541 -44781433 - RCHARR1 DNA MER1_type 0 974 800 3 1032 189 0 0 0 chr15 58713607 58713628 -44781346 + (CA)n Simple_repeat Simple_repeat 1 21 0 3 1032 409 148 106 65 chr15 58713668 58713679 -44781295 - RCHARR1 DNA MER1_type -122 852 844 3 1032 5417 118 24 12 chr15 58713679 58714503 -44780471 + Lx4A LINE L1 6218 7051 -7 3 1032 409 148 106 65 chr15 58714503 58714614 -44780360 - RCHARR1 DNA MER1_type -131 843 725 3 1032 653 270 50 125 chr15 58714676 58715133 -44779841 + RLTR23 LTR ERV1 8 430 0 3 1032 1787 258 84 79 chr15 58715170 58715852 -44779122 - RCHARR1 DNA MER1_type -280 694 10 3 1032 347 257 54 119 chr15 58715942 58716027 -44778947 - L1M5 LINE L1 -1243 4903 4822 3 1032 902 119 27 20 chr15 58716027 58716173 -44778801 - B1_Mus1 SINE Alu -1 147 1 3 1032 347 257 54 119 chr15 58716173 58716255 -44778719 - L1M5 LINE L1 -1325 4821 4747 3 1032 559 183 183 0 chr15 58716275 58716390 -44778584 + B1_Mur4 SINE Alu 9 144 -6 3 1032 183 80 0 0 chr15 58716392 58716417 -44778557 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 1032 266 254 0 0 chr15 58716419 58716490 -44778484 - L1M5 LINE L1 -1446 4700 4630 3 1032 1145 95 0 0 chr15 58716494 58716642 -44778332 - B1_Mus1 SINE Alu 0 148 1 3 1032 482 200 73 37 chr15 58717412 58717521 -44777453 - PB1D9 SINE Alu -6 114 2 3 1032 312 27 0 0 chr15 58717521 58717558 -44777416 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 3 1032 787 123 16 0 chr15 58717575 58717697 -44777277 + B1_Mus2 SINE Alu 11 134 -13 3 1032 365 241 98 49 chr15 58718538 58718660 -44776314 + B1_Mur1 SINE Alu 22 149 0 4 1033 221 98 24 0 chr15 58720381 58720422 -44774552 + (CGAGG)n Simple_repeat Simple_repeat 4 45 0 4 1033 27 0 0 0 chr15 58720715 58720742 -44774232 + GC_rich Low_complexity Low_complexity 1 27 0 4 1033 236 208 0 27 chr15 58720786 58720860 -44774114 + (CCCGG)n Simple_repeat Simple_repeat 5 76 0 4 1033 192 305 32 0 chr15 58722061 58722156 -44772818 - MIRb SINE MIR -100 168 71 4 1033 1070 227 159 35 chr15 58722715 58723148 -44771826 - RMER5 LTR ERV1 0 534 48 4 1033 362 129 29 0 chr15 58723730 58723800 -44771174 + CT-rich Low_complexity Low_complexity 1 72 0 4 1033 1345 104 16 5 chr15 58723800 58723993 -44770981 - B2_Mm2 SINE B2 0 195 1 4 1033 1218 41 7 0 chr15 58724264 58724410 -44770564 + B1_Mm SINE Alu 1 147 0 4 1033 190 0 67 0 chr15 58724410 58724440 -44770534 + (CAAAAA)n Simple_repeat Simple_repeat 5 36 0 4 1033 1620 32 0 5 chr15 58724497 58724685 -44770289 + B2_Mm1a SINE B2 1 187 -6 4 1033 489 302 83 44 chr15 58725006 58725210 -44769764 - ID_B1 SINE B4 -10 214 3 4 1033 250 345 46 78 chr15 58725510 58725727 -44769247 - MER20 DNA MER1_type -5 214 5 4 1033 237 33 0 0 chr15 58726979 58727009 -44767965 + (TCTG)n Simple_repeat Simple_repeat 1 30 0 4 1033 378 364 93 54 chr15 58727079 58727521 -44767453 - MER21B LTR ERV1 -331 532 74 4 1033 394 274 28 0 chr15 58727617 58727723 -44767251 + PB1D9 SINE Alu 6 114 -6 4 1033 324 279 28 37 chr15 58728232 58728340 -44766634 + PB1D10 SINE Alu 10 116 -1 4 1033 25 83 0 0 chr15 58732999 58733059 -44761915 + AT_rich Low_complexity Low_complexity 1 60 0 4 1033 198 143 0 0 chr15 58733059 58733094 -44761880 + (TATATG)n Simple_repeat Simple_repeat 5 39 0 4 1033 1226 91 6 11 chr15 58733212 58733389 -44761585 + B2_Mm2 SINE B2 2 177 -18 4 1033 593 208 75 80 chr15 58733968 58734167 -44760807 - B3A SINE B2 0 198 1 4 1033 367 265 29 10 chr15 58734288 58734391 -44760583 + ID_B1 SINE B4 116 220 -4 4 1033 315 146 0 0 chr15 58737578 58737633 -44757341 - B3A SINE B2 -143 55 1 4 1033 287 236 88 58 chr15 58738256 58738427 -44756547 - L1MC1 LINE L1 -19 6314 6139 4 1033 274 272 80 48 chr15 58739106 58739214 -44755760 - B1F1 SINE Alu -6 111 1 4 1033 1201 90 96 0 chr15 58739430 58739608 -44755366 + B2_Mm2 SINE B2 1 195 0 4 1033 430 226 32 0 chr15 58739622 58739715 -44755259 - B1F SINE Alu -50 99 4 4 1033 1115 98 46 6 chr15 58739777 58739930 -44755044 + B2_Mm2 SINE B2 1 161 -34 4 1033 965 101 164 0 chr15 58739930 58740089 -44754885 - B2_Mm1t SINE B2 -4 189 5 4 1033 1115 98 46 6 chr15 58740089 58740109 -44754865 + B2_Mm2 SINE B2 162 180 -15 4 1033 779 10 49 0 chr15 58740379 58740481 -44754493 - BC1_Mm scRNA scRNA -45 107 1 4 1033 3624 18 0 0 chr15 58743020 58743416 -44751558 + MTA_Mm LTR MaLR 1 396 0 4 1033 9286 37 2 1 chr15 58743416 58744513 -44750461 + MTA_Mm-int LTR MaLR 1 1098 0 4 1033 3624 18 0 0 chr15 58744513 58744909 -44750065 + MTA_Mm LTR MaLR 1 396 0 4 1033 534 172 0 0 chr15 58745141 58745240 -44749734 + (TA)n Simple_repeat Simple_repeat 2 100 0 4 1033 440 205 239 0 chr15 58745503 58745620 -44749354 + B3A SINE B2 2 146 -52 4 1033 232 227 57 57 chr15 58746515 58746585 -44748389 + RSINE1 SINE B4 96 165 0 4 1033 244 204 0 36 chr15 58746755 58746811 -44748163 + Charlie4z DNA MER1_type 41 94 -73 4 1033 960 74 0 7 chr15 58747036 58747172 -44747802 + B1_Mus1 SINE Alu 2 136 -12 4 1033 216 0 0 0 chr15 58747173 58747197 -44747777 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4 1033 685 85 9 9 chr15 58747245 58747352 -44747622 + (GAAA)n Simple_repeat Simple_repeat 2 108 0 4 1033 717 274 24 5 chr15 58748296 58748501 -44746473 + ID_B1 SINE B4 3 211 -13 4 1033 218 0 94 0 chr15 58748501 58748533 -44746441 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 4 1033 1154 159 138 10 chr15 58748603 58748824 -44746150 - RMER17C LTR ERVK -58 352 93 4 1033 180 0 0 0 chr15 58748824 58748844 -44746130 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 1033 1154 159 138 10 chr15 58748844 58748934 -44746040 - RMER17C LTR ERVK -318 92 2 4 1033 1010 109 0 7 chr15 58749122 58749270 -44745704 + B1_Mus1 SINE Alu 2 148 0 4 1033 239 344 12 72 chr15 58749459 58749625 -44745349 + RSINE1 SINE B4 4 159 -6 4 1033 632 250 12 24 chr15 58750296 58750460 -44744514 + B3A SINE B2 2 163 -35 4 1033 550 185 146 0 chr15 58750851 58750981 -44743993 + B1F2 SINE Alu 1 149 0 4 1033 302 244 24 0 chr15 58751022 58751104 -44743870 + B4A SINE B4 2 85 -207 4 1033 263 229 16 0 chr15 58751126 58751187 -44743787 + B4 SINE B4 227 288 -4 4 1033 520 150 232 40 chr15 58753271 58753396 -44741578 - B1_Mur3 SINE Alu 0 149 1 4 1033 383 339 38 8 chr15 58753525 58753656 -44741318 + B3A SINE B2 27 161 -37 4 1033 435 19 0 0 chr15 58753658 58753710 -44741264 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1033 22 0 0 0 chr15 58753724 58753746 -44741228 + AT_rich Low_complexity Low_complexity 1 22 0 4 1033 577 191 283 0 chr15 58754470 58754622 -44740352 - B3A SINE B2 -2 196 2 4 1033 30 27 0 0 chr15 58754631 58754668 -44740306 + AT_rich Low_complexity Low_complexity 1 37 0 4 1033 3540 45 0 2 chr15 58754671 58755093 -44739881 - L1_Mus2 LINE L1 0 6566 6146 4 1033 27 29 0 0 chr15 58755113 58755147 -44739827 + AT_rich Low_complexity Low_complexity 1 34 0 4 1033 634 250 129 15 chr15 58755862 58756265 -44738709 + Charlie1b DNA MER1_type 66 507 -16 4 1033 180 0 0 0 chr15 58757183 58757203 -44737771 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 1033 288 344 0 0 chr15 58758374 58758496 -44736478 + (TG)n Simple_repeat Simple_repeat 1 122 0 4 1033 656 216 72 16 chr15 58758544 58758737 -44736237 - B4A SINE B4 -87 205 2 4 1033 34 55 0 0 chr15 58758824 58758879 -44736095 + AT_rich Low_complexity Low_complexity 1 55 0 4 1033 205 176 0 0 chr15 58758991 58759025 -44735949 + (CATA)n Simple_repeat Simple_repeat 4 37 0 4 1033 692 250 0 90 chr15 58759693 58759882 -44735092 - B3A SINE B2 -15 183 12 4 1033 379 239 18 2 chr15 58760027 58760139 -44734835 - PB1D10 SINE Alu -1 116 3 4 1033 960 193 92 158 chr15 58760773 58761173 -44733801 + ORR1D1 LTR MaLR 1 374 0 4 1033 1579 82 24 12 chr15 58761641 58761888 -44733086 + RMER6A LTR ERVK 1 250 -506 4 1033 212 216 0 89 chr15 58762903 58762959 -44732015 - B4A SINE B4 -157 135 85 4 1033 489 295 9 144 chr15 58763071 58763293 -44731681 + B3A SINE B2 1 192 -6 4 1033 21 36 0 0 chr15 58763456 58763484 -44731490 + AT_rich Low_complexity Low_complexity 1 28 0 4 1033 1061 70 21 7 chr15 58763510 58763654 -44731320 + B1_Mus1 SINE Alu 1 146 -2 4 1033 498 253 45 62 chr15 58766684 58766861 -44728113 - B4A SINE B4 -117 175 2 4 1033 22 0 0 0 chr15 58767193 58767215 -44727759 + AT_rich Low_complexity Low_complexity 1 22 0 4 1033 783 265 46 43 chr15 58768517 58768797 -44726177 - B4A SINE B4 -1 291 11 4 1033 268 270 169 0 chr15 58771351 58771440 -44723534 - B4A SINE B4 -187 105 2 4 1033 1338 91 38 0 chr15 58771534 58771720 -44723254 + B2_Mm2 SINE B2 2 194 -1 4 1033 307 171 70 14 chr15 58772189 58772260 -44722714 + B1_Mur1 SINE Alu 58 132 -17 4 1033 304 127 0 52 chr15 58772326 58772384 -44722590 - B2_Mm2 SINE B2 -94 101 47 4 1033 1067 122 12 0 chr15 58772435 58772599 -44722375 - B2_Mm1t SINE B2 -26 167 2 4 1033 292 347 60 38 chr15 58776236 58776419 -44718555 - MER20 DNA MER1_type -31 188 2 4 1033 389 263 146 0 chr15 58776580 58776717 -44718257 + MIRb SINE MIR 86 242 -26 4 1033 201 74 0 0 chr15 58777834 58777861 -44717113 + (GA)n Simple_repeat Simple_repeat 1 27 0 4 1033 779 133 33 0 chr15 58778624 58778869 -44716105 + GA-rich Low_complexity Low_complexity 1 253 0 4 1033 840 243 17 0 chr15 58780748 58780929 -44714045 + ORR1D1 LTR MaLR 1 184 -190 4 1033 254 246 68 14 chr15 58781227 58781301 -44713673 + ID4_ SINE ID 3 80 -3 4 1033 351 44 0 0 chr15 58781349 58781394 -44713580 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1033 468 0 0 0 chr15 58781453 58781505 -44713469 + (GA)n Simple_repeat Simple_repeat 1 52 0 4 1033 566 301 122 26 chr15 58781559 58781788 -44713186 - B4A SINE B4 -14 278 28 4 1033 198 0 0 0 chr15 58783427 58783449 -44711525 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1033 2098 86 38 6 chr15 58785846 58786163 -44708811 + ORR1A2 LTR MaLR 1 327 0 4 1033 248 384 14 36 chr15 58786336 58786474 -44708500 + MIR SINE MIR 22 156 -106 4 1033 621 228 6 76 chr15 58787553 58787710 -44707264 - B1F1 SINE Alu -1 148 3 4 1033 279 0 0 0 chr15 58787733 58787764 -44707210 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 4 1033 350 185 0 15 chr15 58788866 58788932 -44706042 + MER58A DNA MER1_type 47 111 -113 4 1033 624 192 17 223 chr15 58790471 58790655 -44704319 - B3 SINE B2 0 216 50 4 1033 682 316 66 29 chr15 58790718 58790992 -44703982 + B4A SINE B4 9 292 0 4 1033 440 235 0 0 chr15 58791107 58791188 -44703786 + PB1D10 SINE Alu 3 83 -34 4 1033 1717 118 55 70 chr15 58791188 58791597 -44703377 + MT2B LTR ERVL 1 475 0 4 1033 296 163 47 0 chr15 58791927 58792013 -44702961 + (TA)n Simple_repeat Simple_repeat 1 90 0 4 1033 932 243 10 0 chr15 58792091 58792293 -44702681 - B3 SINE B2 -12 204 1 4 1033 181 326 22 0 chr15 58792317 58792406 -44702568 + L2 LINE L2 2642 2732 -687 4 1033 241 303 15 0 chr15 58794063 58794129 -44700845 + MER21B LTR ERV1 21 87 -776 4 1033 480 302 49 32 chr15 58794716 58794990 -44699984 + L1MB7 LINE L1 5892 6180 0 5 1033 185 132 26 0 chr15 58795813 58795851 -44699123 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1033 264 30 0 0 chr15 58796632 58796665 -44698309 + (CAA)n Simple_repeat Simple_repeat 2 34 0 5 1033 358 292 0 40 chr15 58796763 58796888 -44698086 - BC1_Mm scRNA scRNA -31 121 2 5 1033 37 23 0 0 chr15 58796894 58796938 -44698036 + AT_rich Low_complexity Low_complexity 1 44 0 5 1033 363 23 0 0 chr15 58796994 58797038 -44697936 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1033 912 147 203 0 chr15 58799382 58799559 -44695415 + B3 SINE B2 2 214 -2 5 1033 1020 217 0 42 chr15 58800004 58800216 -44694758 + B3 SINE B2 10 212 -4 5 1033 21 0 0 0 chr15 58800685 58800706 -44694268 + AT_rich Low_complexity Low_complexity 1 21 0 5 1033 682 224 35 35 chr15 58800883 58801086 -44693888 + B4A SINE B4 2 204 -88 5 1033 1339 76 16 0 chr15 58801087 58801272 -44693702 + B2_Mm2 SINE B2 8 195 0 5 1033 218 189 0 0 chr15 58801376 58801413 -44693561 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1033 285 261 56 11 chr15 58802682 58802771 -44692203 + PB1D10 SINE Alu 16 108 -9 5 1033 284 296 74 125 chr15 58802847 58803063 -44691911 + B4A SINE B4 14 218 -74 5 1033 640 221 0 41 chr15 58802930 58803076 -44691898 + B1_Mur1 SINE Alu 10 149 0 5 1033 235 261 0 154 chr15 58805252 58805356 -44689618 + PB1D9 SINE Alu 2 89 -31 5 1033 234 0 0 0 chr15 58805364 58805390 -44689584 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 5 1033 464 212 10 0 chr15 58805401 58805500 -44689474 + B1_Mur1 SINE Alu 35 134 -15 5 1033 279 0 0 0 chr15 58805501 58805532 -44689442 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 1033 467 316 85 5 chr15 58805774 58805962 -44689012 + ID_B1 SINE B4 4 206 -18 5 1033 198 128 0 0 chr15 58806001 58806040 -44688934 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1033 180 0 0 0 chr15 58806146 58806166 -44688808 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1033 272 252 48 48 chr15 58806318 58806422 -44688552 + L1M5 LINE L1 5563 5666 -458 5 1033 338 355 49 7 chr15 58806594 58806736 -44688238 - MIR SINE MIR -47 215 68 5 1033 236 242 65 120 chr15 58807624 58807732 -44687242 - B4A SINE B4 -12 280 179 5 1033 414 0 0 0 chr15 58807825 58807871 -44687103 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 1033 216 0 0 0 chr15 58807871 58807894 -44687080 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1033 491 261 27 0 chr15 58808605 58808716 -44686258 - ID_B1 SINE B4 -1 223 110 5 1033 513 0 0 0 chr15 58809397 58809454 -44685520 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1033 312 335 154 30 chr15 58809542 58809841 -44685133 - Tigger13a DNA MER2_type -380 391 56 5 1033 28 0 0 0 chr15 58811928 58811956 -44683018 + AT_rich Low_complexity Low_complexity 1 28 0 5 1033 549 55 0 0 chr15 58812873 58812946 -44682028 + (GGA)n Simple_repeat Simple_repeat 3 75 0 5 1033 664 226 83 0 chr15 58812957 58813125 -44681849 + B3A SINE B2 1 182 -16 5 1033 504 246 181 52 chr15 58814590 58814920 -44680054 - MTEa LTR MaLR -5 374 2 5 1033 633 228 60 0 chr15 58815971 58816120 -44678854 + B4A SINE B4 133 290 -2 5 1033 332 118 26 0 chr15 58816162 58816238 -44678736 + (CAGAGA)n Simple_repeat Simple_repeat 6 83 0 5 1033 247 250 0 0 chr15 58816894 58816958 -44678016 + GA-rich Low_complexity Low_complexity 4 67 0 5 1033 1182 156 9 18 chr15 58817610 58817838 -44677136 - URR1A DNA MER1_type 0 226 1 5 1033 269 109 18 0 chr15 58818804 58818859 -44676115 + (CAGA)n Simple_repeat Simple_repeat 3 58 0 5 1033 224 288 17 0 chr15 58820319 58820378 -44674596 + L2b LINE L2 3309 3368 -7 5 1033 243 293 81 0 chr15 58822076 58822175 -44672799 + L1MA9 LINE L1 6154 6260 -52 5 1033 294 95 0 0 chr15 58822179 58822221 -44672753 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1033 282 297 62 9 chr15 58822233 58822345 -44672629 - PB1D7 SINE Alu 0 120 3 5 1033 579 107 99 69 chr15 58823520 58823651 -44671323 + B2_Mm2 SINE B2 35 169 -26 5 1033 456 19 0 0 chr15 58823790 58823843 -44671131 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1033 234 319 70 9 chr15 58824401 58824515 -44670459 + MIRb SINE MIR 67 187 -81 5 1033 1078 84 0 0 chr15 58824666 58824809 -44670165 + B1_Mus1 SINE Alu 1 143 -5 5 1033 1036 111 0 7 chr15 58825196 58825350 -44669624 + B2_Mm2 SINE B2 2 154 -41 5 1033 337 157 14 0 chr15 58825367 58825440 -44669534 + B2_Mm2 SINE B2 47 123 -93 5 1033 26 0 0 0 chr15 58825444 58825470 -44669504 + AT_rich Low_complexity Low_complexity 1 26 0 5 1033 1195 21 0 0 chr15 58825680 58825820 -44669154 + B1_Mus2 SINE Alu 1 140 -7 5 1033 251 260 25 25 chr15 58826535 58826614 -44668360 - B4 SINE B4 -212 80 2 5 1033 204 67 0 0 chr15 58828217 58828247 -44666727 + (G)n Simple_repeat Simple_repeat 1 30 0 5 1033 427 228 63 57 chr15 58828980 58829138 -44665836 + Tigger7 DNA MER2_type 2278 2436 -55 5 1033 207 0 0 0 chr15 58831897 58831920 -44663054 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 5 1033 255 268 217 10 chr15 58831987 58832139 -44662835 - B3 SINE B2 0 216 37 5 1033 756 238 14 65 chr15 58832592 58832808 -44662166 + ID_B1 SINE B4 4 208 -16 5 1033 281 262 100 0 chr15 58833643 58833723 -44661251 + MER5A1 DNA MER1_type 73 160 -6 5 1033 625 280 24 87 chr15 58834720 58834927 -44660047 - B3 SINE B2 -15 201 8 5 1033 354 235 62 0 chr15 58835143 58835224 -44659750 - ID_B1 SINE B4 -13 211 126 5 1033 435 315 59 40 chr15 58837617 58837769 -44657205 - RSINE1 SINE B4 -8 157 3 5 1033 297 0 0 0 chr15 58837780 58837813 -44657161 + (ACTG)n Simple_repeat Simple_repeat 2 34 0 5 1033 572 318 111 26 chr15 58837968 58838194 -44656780 + B4 SINE B4 36 280 -12 5 1033 904 228 28 33 chr15 58838254 58838467 -44656507 - B3 SINE B2 -3 213 2 5 1033 232 343 51 103 chr15 58838772 58838967 -44656007 - Tigger13a DNA MER2_type -84 687 503 5 1033 1830 154 29 58 chr15 58839570 58839914 -44655060 - RLTR25A LTR ERVK -755 348 15 5 1033 1190 83 0 0 chr15 58840636 58840793 -44654181 + B2_Mm2 SINE B2 2 158 -37 5 1033 288 0 0 0 chr15 58840793 58840825 -44654149 + (TTAA)n Simple_repeat Simple_repeat 4 35 0 5 1033 294 232 197 10 chr15 58840864 58840974 -44654000 - B1F SINE Alu -1 148 19 5 1033 215 209 70 16 chr15 58841016 58841097 -44653877 + MIR SINE MIR 115 198 -64 5 1033 320 197 61 73 chr15 58841540 58841622 -44653352 + PB1D10 SINE Alu 37 117 0 5 1033 342 318 85 8 chr15 58841907 58842037 -44652937 + B1F SINE Alu 2 141 -8 5 1033 301 294 42 67 chr15 58842956 58843113 -44651861 + RSINE1 SINE B4 2 153 -12 5 1033 297 75 0 0 chr15 58843115 58843155 -44651819 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1033 392 205 48 12 chr15 58843201 58843285 -44651689 + B1_Mur3 SINE Alu 53 139 -10 5 1033 185 146 21 0 chr15 58843661 58843709 -44651265 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 5 1033 239 217 49 16 chr15 58844027 58844088 -44650886 - MIRc SINE MIR -94 174 112 5 1033 186 280 24 0 chr15 58844170 58844227 -44650747 + MIR SINE MIR 47 110 -158 5 1033 186 133 0 0 chr15 58844227 58844257 -44650717 + (CACCAT)n Simple_repeat Simple_repeat 4 33 0 5 1033 549 223 90 8 chr15 58845420 58845542 -44649432 + B1_Mur1 SINE Alu 5 136 -13 5 1033 209 33 0 32 chr15 58845544 58845575 -44649399 + (TAAAA)n Simple_repeat Simple_repeat 3 32 0 5 1033 247 335 141 10 chr15 58845695 58845894 -44649080 - MER33 DNA MER1_type -75 249 25 5 1033 360 0 0 0 chr15 58847088 58847128 -44647846 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1033 252 0 0 0 chr15 58847782 58847810 -44647164 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1033 323 154 0 9 chr15 58848097 58848201 -44646773 + CT-rich Low_complexity Low_complexity 1 103 0 5 1033 695 178 96 0 chr15 58848210 58848345 -44646629 - B1_Mus1 SINE Alu 0 148 1 5 1033 1051 248 138 62 chr15 58848487 58848951 -44646023 - Lx8 LINE L1 -152 7321 6823 5 1033 423 320 66 12 chr15 58849103 58849305 -44645669 + MLT1A0 LTR MaLR 113 328 -46 5 1033 264 91 0 0 chr15 58850544 58850588 -44644386 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1034 887 199 113 52 chr15 58851490 58851702 -44643272 - URR1A DNA MER1_type -1 225 1 5 1034 257 186 0 0 chr15 58852198 58852241 -44642733 + L2b LINE L2 3330 3372 -3 5 1034 234 0 0 0 chr15 58852610 58852636 -44642338 + (CAGA)n Simple_repeat Simple_repeat 4 29 0 5 1034 395 241 7 32 chr15 58853357 58853464 -44641510 - B1F1 SINE Alu -20 130 28 5 1034 333 0 0 0 chr15 58855167 58855204 -44639770 + (TC)n Simple_repeat Simple_repeat 1 37 0 5 1034 315 49 0 0 chr15 58855204 58855244 -44639730 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1034 251 305 127 39 chr15 58855337 58855518 -44639456 + MIRb SINE MIR 71 267 -1 5 1034 207 139 0 0 chr15 58855641 58855677 -44639297 + (ATG)n Simple_repeat Simple_repeat 1 36 0 5 1034 209 292 0 0 chr15 58855841 58855906 -44639068 + A-rich Low_complexity Low_complexity 1 65 0 5 1034 559 301 28 28 chr15 58856852 58857033 -44637941 - B3A SINE B2 -17 181 1 5 1034 402 165 0 23 chr15 58857034 58857121 -44637853 + L1MB4 LINE L1 6094 6178 -2 5 1034 226 357 20 10 chr15 58857564 58857663 -44637311 - Helitron2Na_Mam RC Helitron? -111 213 114 6 1034 423 0 0 0 chr15 58858121 58858168 -44636806 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1034 1209 228 84 53 chr15 58858792 58859149 -44635825 + ORR1D2 LTR MaLR 1 368 -2 6 1034 185 302 19 0 chr15 58859407 58859460 -44635514 - L2a LINE L2 -343 3083 3030 6 1034 1179 82 0 0 chr15 58860024 58860171 -44634803 + B1_Mus2 SINE Alu 1 147 0 6 1034 248 200 0 15 chr15 58860379 58860445 -44634529 + C-rich Low_complexity Low_complexity 3 67 0 6 1034 1099 73 0 7 chr15 58860446 58860583 -44634391 - B1_Mus1 SINE Alu -12 136 1 6 1034 308 371 17 0 chr15 58862838 58863016 -44631958 - L1MD2 LINE L1 -495 5864 5684 6 1034 228 35 0 0 chr15 58866025 58866054 -44628920 + (CACCC)n Simple_repeat Simple_repeat 3 31 0 6 1034 986 120 7 27 chr15 58866658 58866804 -44628170 + B1_Mur4 SINE Alu 3 145 -5 6 1034 328 149 10 41 chr15 58866808 58866906 -44628068 + GA-rich Low_complexity Low_complexity 2 96 0 6 1034 281 26 26 0 chr15 58867200 58867238 -44627736 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1034 1069 167 108 0 chr15 58868501 58868687 -44626287 + B3 SINE B2 1 206 -10 6 1034 571 223 57 67 chr15 58868722 58868897 -44626077 + B3 SINE B2 1 187 -6 6 1034 190 379 85 24 chr15 58870119 58870284 -44624690 - MIRc SINE MIR -31 237 63 6 1034 1638 161 122 15 chr15 58870344 58870679 -44624295 - ORR1D1 LTR MaLR 0 374 4 6 1034 659 229 0 83 chr15 58870862 58871019 -44623955 + RSINE1 SINE B4 3 146 -19 6 1034 198 91 0 0 chr15 58871064 58871097 -44623877 + (A)n Simple_repeat Simple_repeat 1 33 0 6 1034 1435 67 17 0 chr15 58871201 58871379 -44623595 + B2_Mm2 SINE B2 1 181 -14 6 1034 444 118 0 0 chr15 58872881 58872949 -44622025 + (TC)n Simple_repeat Simple_repeat 2 69 0 6 1034 21 0 0 0 chr15 58873106 58873127 -44621847 + AT_rich Low_complexity Low_complexity 1 21 0 6 1034 458 229 234 29 chr15 58873449 58873624 -44621350 + ID_B1 SINE B4 2 212 -12 6 1034 890 224 0 12 chr15 58873809 58873981 -44620993 + B3 SINE B2 1 170 -46 6 1034 25 0 0 0 chr15 58873994 58874019 -44620955 + AT_rich Low_complexity Low_complexity 1 25 0 6 1034 555 250 45 19 chr15 58874022 58874177 -44620797 + RSINE1 SINE B4 3 161 -4 6 1034 824 67 0 0 chr15 58874255 58874359 -44620615 - B1_Mus2 SINE Alu -5 142 39 6 1034 344 42 0 20 chr15 58874394 58874443 -44620531 - B1_Mus1 SINE Alu -89 59 12 6 1034 323 209 40 27 chr15 58874443 58874509 -44620465 - B4A SINE B4 -77 138 28 6 1034 201 209 23 0 chr15 58876262 58876305 -44618669 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 6 1034 310 279 45 134 chr15 58877072 58877341 -44617633 + MT2B LTR ERVL 20 264 -337 6 1034 798 113 15 68 chr15 58877235 58877368 -44617606 + B1_Mus2 SINE Alu 14 139 -8 6 1034 369 291 41 5 chr15 58877385 58877513 -44617461 + B1F2 SINE Alu 1 130 -19 6 1034 575 268 48 21 chr15 58877867 58878012 -44616962 - RSINE1 SINE B4 -13 152 4 6 1034 777 159 86 16 chr15 58878051 58878179 -44616795 + B1_Mm SINE Alu 3 139 -8 6 1034 549 160 0 0 chr15 58878676 58878820 -44616154 + (CA)n Simple_repeat Simple_repeat 2 145 0 6 1034 337 197 0 62 chr15 58881082 58881163 -44613811 + MER44D DNA MER2_type 46 121 -584 6 1034 289 189 156 0 chr15 58881153 58881243 -44613731 + MER44D DNA MER2_type 485 588 -117 6 1034 312 27 0 0 chr15 58881243 58881280 -44613694 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1034 27 29 0 0 chr15 58882022 58882056 -44612918 + AT_rich Low_complexity Low_complexity 1 34 0 6 1034 671 100 50 7 chr15 58882517 58882658 -44612316 + GA-rich Low_complexity Low_complexity 2 148 0 6 1034 713 238 98 7 chr15 58882659 58882942 -44612032 + L1M2 LINE L1 5477 5797 -494 6 1034 1460 66 0 6 chr15 58882953 58883136 -44611838 + B2_Mm2 SINE B2 2 183 -12 6 1034 369 0 0 0 chr15 58883136 58883177 -44611797 + (GGGA)n Simple_repeat Simple_repeat 2 42 0 6 1034 219 231 0 55 chr15 58883334 58883426 -44611548 + G-rich Low_complexity Low_complexity 1 86 0 6 1034 488 246 216 42 chr15 58883646 58883865 -44611109 + B4A SINE B4 35 291 -1 6 1034 511 241 79 37 chr15 58884833 58885010 -44609964 + ID_B1 SINE B4 43 223 -1 6 1034 366 254 193 8 chr15 58885005 58885124 -44609850 + RSINE1 SINE B4 11 151 -14 6 1034 269 401 21 48 chr15 58885448 58885634 -44609340 + L2c LINE L2 3128 3308 -79 6 1034 370 144 22 11 chr15 58887708 58887799 -44607175 + CT-rich Low_complexity Low_complexity 3 94 0 6 1034 309 98 0 0 chr15 58887799 58887840 -44607134 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1034 247 278 175 56 chr15 58889468 58889628 -44605346 + MIR SINE MIR 1 179 -83 6 1034 724 188 32 65 chr15 58890267 58890421 -44604553 + B1_Mur4 SINE Alu 2 150 0 6 1034 414 0 0 0 chr15 58891107 58891153 -44603821 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1034 318 340 31 43 chr15 58891154 58891317 -44603657 + HAL1b LINE L1 1406 1566 -443 6 1034 668 278 33 42 chr15 58891389 58891603 -44603371 - MER20 DNA MER1_type -7 212 1 6 1034 488 293 46 77 chr15 58891707 58891966 -44603008 + HAL1b LINE L1 1757 2007 -2 6 1034 371 272 135 112 chr15 58892262 58892432 -44602542 + ID_B1 SINE B4 51 224 0 6 1034 914 245 88 67 chr15 58892452 58892736 -44602238 + B4 SINE B4 1 290 -2 6 1034 283 314 143 0 chr15 58893238 58893343 -44601631 + B1F SINE Alu 2 121 -28 6 1034 276 272 202 16 chr15 58893765 58893948 -44601026 + L1MA6 LINE L1 5732 5948 -352 6 1034 393 302 87 14 chr15 58894019 58894227 -44600747 + L1MB7 LINE L1 5951 6173 -11 6 1034 261 279 34 23 chr15 58897062 58897150 -44597824 - MER5A1 DNA MER1_type -5 161 73 6 1034 313 297 51 0 chr15 58898378 58898496 -44596478 - MER3 DNA MER1_type -1 208 85 6 1034 292 257 104 96 chr15 58898620 58898745 -44596229 - B1F SINE Alu -1 148 23 6 1034 372 71 0 0 chr15 58898865 58898921 -44596053 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1034 225 0 0 0 chr15 58899555 58899580 -44595394 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 1034 234 354 91 42 chr15 58899949 58900114 -44594860 + MIR SINE MIR 10 182 -80 6 1034 186 195 24 24 chr15 58900196 58900238 -44594736 - L2c LINE L2 -12 3375 3334 6 1034 246 32 0 0 chr15 58900498 58900529 -44594445 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1034 333 218 90 0 chr15 58900642 58900720 -44594254 + MER5A DNA MER1_type 49 133 -56 6 1034 777 183 193 6 chr15 58901264 58901445 -44593529 + B3 SINE B2 1 215 -1 6 1034 403 254 24 88 chr15 58901531 58901656 -44593318 + L2a LINE L2 3286 3402 -24 6 1034 439 291 86 8 chr15 58902691 58902819 -44592155 - B4A SINE B4 -153 139 2 6 1034 228 200 35 35 chr15 58903050 58903107 -44591867 + MIR SINE MIR 95 151 -111 6 1034 777 79 0 0 chr15 58903613 58903727 -44591247 + (TG)n Simple_repeat Simple_repeat 2 115 0 6 1034 779 153 0 30 chr15 58904150 58904285 -44590689 - B1_Mur4 SINE Alu 0 150 20 6 1034 261 0 0 0 chr15 58904285 58904314 -44590660 + (CCA)n Simple_repeat Simple_repeat 2 30 0 6 1034 232 315 14 0 chr15 58905057 58905130 -44589844 - MIR SINE MIR -92 170 97 6 1034 2375 71 0 10 chr15 58905295 58905606 -44589368 + L1Md_F2 LINE L1 6275 6582 0 6 1034 242 278 42 0 chr15 58905609 58905681 -44589293 - MER3 DNA MER1_type 0 209 135 6 1034 654 273 0 7 chr15 58905714 58905858 -44589116 - ID_B1 SINE B4 0 224 82 6 1034 270 271 42 0 chr15 58905952 58906048 -44588926 - L1MB4 LINE L1 -1 6179 6080 6 1034 219 36 0 0 chr15 58907532 58907560 -44587414 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1034 366 23 0 0 chr15 58909115 58909158 -44585816 + (TTCC)n Simple_repeat Simple_repeat 4 46 0 6 1034 188 305 17 0 chr15 58909196 58909255 -44585719 + MIRm SINE MIR 215 274 -2 6 1034 189 107 0 0 chr15 58909724 58909752 -44585222 + (TTC)n Simple_repeat Simple_repeat 2 29 0 6 1034 225 0 0 0 chr15 58910575 58910600 -44584374 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1034 21 57 0 0 chr15 58913669 58913704 -44581270 + GC_rich Low_complexity Low_complexity 1 35 0 6 1034 432 358 28 7 chr15 58914859 58915065 -44579909 + MIR SINE MIR 42 253 -15 6 1034 305 229 59 118 chr15 58915393 58915512 -44579462 - ID_B1 SINE B4 -112 112 1 6 1034 352 279 18 9 chr15 58915530 58915642 -44579332 - PB1D7 SINE Alu -7 113 1 6 1034 1149 39 0 0 chr15 58915805 58915935 -44579039 - B1_Mus1 SINE Alu -18 130 1 6 1034 1444 74 11 0 chr15 58915935 58916124 -44578850 - B2_Mm1t SINE B2 0 193 2 6 1034 207 146 0 0 chr15 58916149 58916190 -44578784 + (TGG)n Simple_repeat Simple_repeat 1 41 0 6 1034 379 327 44 19 chr15 58916552 58916711 -44578263 - MER5B DNA MER1_type -11 167 5 6 1034 252 259 86 77 chr15 58917309 58917340 -44577634 + B4A SINE B4 50 81 -211 6 1034 478 119 31 61 chr15 58917340 58917438 -44577536 + B1_Mur4 SINE Alu 1 95 -55 6 1034 641 293 92 5 chr15 58917449 58917655 -44577319 - B4 SINE B4 -66 226 3 6 1034 447 321 0 48 chr15 58917676 58917701 -44577273 + ID_B1 SINE B4 65 223 -1 6 1034 737 246 0 0 chr15 58917701 58917843 -44577131 + B1_Mur2 SINE Alu 7 148 -1 6 1034 303 28 0 0 chr15 58918072 58918108 -44576866 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1034 225 0 0 0 chr15 58918108 58918132 -44576842 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 1034 386 250 0 30 chr15 58918955 58919054 -44575920 + RMER30 DNA MER1_type 8 103 -99 7 1034 240 35 0 0 chr15 58919074 58919103 -44575871 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 1034 390 160 27 38 chr15 58919103 58919198 -44575776 + B1_Mm SINE Alu 32 127 -21 7 1034 386 275 13 101 chr15 58919642 58919800 -44575174 + RSINE1 SINE B4 4 147 -18 7 1034 530 276 171 11 chr15 58920219 58920406 -44574568 + ID_B1 SINE B4 1 217 -7 7 1034 417 311 58 0 chr15 58920616 58920719 -44574255 + RSINE1 SINE B4 3 111 -54 7 1034 392 245 77 77 chr15 58921416 58921624 -44573350 - LTR33 LTR ERVL -18 497 290 7 1034 546 180 118 50 chr15 58921951 58922150 -44572824 - L1MB8 LINE L1 -166 6018 5811 7 1034 555 227 181 7 chr15 58922150 58922305 -44572669 - B3A SINE B2 0 198 17 7 1034 294 250 10 154 chr15 58922326 58922430 -44572544 - B4A SINE B4 -203 89 1 7 1034 324 0 0 0 chr15 58922765 58922801 -44572173 + (TTG)n Simple_repeat Simple_repeat 1 36 0 7 1034 249 268 13 53 chr15 58922808 58922883 -44572091 - ID2 SINE ID -9 74 3 7 1034 431 309 29 29 chr15 58922905 58923045 -44571929 - ID_B1 SINE B4 -2 222 83 7 1034 800 50 0 0 chr15 58923093 58923193 -44571781 - B1_Mus2 SINE Alu 0 147 48 7 1034 227 239 14 56 chr15 58923516 58923587 -44571387 + MIRb SINE MIR 4 71 -197 7 1034 246 32 0 0 chr15 58924249 58924280 -44570694 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 7 1034 414 53 0 0 chr15 58924330 58924387 -44570587 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1034 304 308 39 0 chr15 58925075 58925179 -44569795 + MER2 DNA MER2_type 186 293 -52 7 1034 279 0 0 0 chr15 58925553 58925584 -44569390 + (TC)n Simple_repeat Simple_repeat 2 32 0 7 1034 384 40 0 0 chr15 58925584 58925633 -44569341 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1034 216 0 0 0 chr15 58925825 58925849 -44569125 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 7 1034 579 215 0 27 chr15 58926161 58926271 -44568703 - ID_B1 SINE B4 -21 203 97 7 1034 403 281 24 24 chr15 58926271 58926282 -44568692 - B1_Mus1 SINE Alu -20 125 5 7 1034 437 323 171 23 chr15 58926372 58926629 -44568345 + RMER15 LTR ERVL 267 561 -14 7 1034 296 247 0 76 chr15 58926924 58927016 -44567958 + MLT1A1 LTR MaLR 315 399 -9 7 1034 1189 299 79 56 chr15 58927033 58927565 -44567409 + MER89 LTR ERV1 7 550 -9 7 1034 249 295 61 31 chr15 58927571 58927669 -44567305 + Charlie23a DNA MER1_type 92 192 -147 7 1034 962 222 43 19 chr15 58927681 58927892 -44567082 + B4 SINE B4 3 218 -74 7 1034 806 313 7 60 chr15 58927902 58928204 -44566770 + B4A SINE B4 3 288 -4 7 1034 1518 73 5 0 chr15 58928429 58928620 -44566354 + B2_Mm1a SINE B2 1 192 -1 7 1034 472 266 62 94 chr15 58928709 58928933 -44566041 + MIRb SINE MIR 1 217 -51 7 1034 1368 106 92 0 chr15 58928936 58929143 -44565831 - URR1A DNA MER1_type 0 226 1 7 1034 221 0 0 33 chr15 58930260 58930290 -44564684 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1034 1199 61 7 0 chr15 58930293 58930440 -44564534 - B1_Mus1 SINE Alu 0 148 1 7 1034 556 312 80 53 chr15 58930477 58930741 -44564233 + MLT2C1 LTR ERVL 120 390 -7 7 1034 357 333 19 25 chr15 58931216 58931376 -44563598 + L1MB7 LINE L1 5456 5614 -570 7 1034 1113 258 108 53 chr15 58931520 58931561 -44563413 + L1MB7 LINE L1 5643 5687 -497 7 1034 288 0 0 0 chr15 58931561 58931593 -44563381 + (TA)n Simple_repeat Simple_repeat 2 33 0 7 1034 4534 12 0 0 chr15 58931593 58932086 -44562888 + MT2_Mm LTR ERVL 1 493 0 7 1034 1113 258 108 53 chr15 58932086 58932550 -44562424 + L1MB7 LINE L1 5688 6176 -8 7 1034 264 316 108 83 chr15 58932910 58933113 -44561861 - ORR1E LTR MaLR -44 315 108 7 1034 336 158 18 0 chr15 58933113 58933170 -44561804 - RLTR14 LTR ERV1 0 382 325 7 1034 1247 34 0 13 chr15 58933179 58933329 -44561645 + B1_Mus1 SINE Alu 1 148 0 7 1034 274 74 37 0 chr15 58933330 58933384 -44561590 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 7 1034 2063 130 49 15 chr15 58933384 58933711 -44561263 - RLTR14 LTR ERV1 -44 338 1 7 1034 252 287 127 18 chr15 58933791 58933901 -44561073 - MLT1A1 LTR MaLR -286 122 1 7 1034 189 0 0 0 chr15 58934008 58934029 -44560945 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 7 1034 216 261 125 70 chr15 58934499 58934627 -44560347 - MIR SINE MIR -89 173 39 7 1034 1363 133 29 0 chr15 58934754 58934964 -44560010 - URR1B DNA MER1_type -1 224 9 7 1034 1085 78 0 7 chr15 58935246 58935400 -44559574 + (GAA)n Simple_repeat Simple_repeat 3 155 0 7 1034 1519 223 56 70 chr15 58936282 58936696 -44558278 - MTD LTR MaLR 0 419 12 7 1034 813 95 0 0 chr15 58936752 58936868 -44558106 + (TTTC)n Simple_repeat Simple_repeat 3 118 0 7 1034 279 79 0 0 chr15 58936869 58936907 -44558067 + (TTA)n Simple_repeat Simple_repeat 2 39 0 7 1034 255 347 40 0 chr15 58937096 58937220 -44557754 - Lx8 LINE L1 -311 7162 7034 7 1034 489 255 8 41 chr15 58938026 58938163 -44556811 + ORR1E LTR MaLR 7 147 -227 7 1034 528 30 0 0 chr15 58938198 58938264 -44556710 + (CA)n Simple_repeat Simple_repeat 1 66 0 7 1034 307 314 142 23 chr15 58938671 58938847 -44556127 - MER20 DNA MER1_type -1 218 22 7 1034 478 328 0 7 chr15 58939683 58939818 -44555156 + ID_B1 SINE B4 82 215 -9 7 1034 484 216 41 0 chr15 58939822 58939919 -44555055 - B4 SINE B4 -188 104 4 7 1034 424 304 70 0 chr15 58939950 58940065 -44554909 + RSINE1 SINE B4 2 124 -41 7 1034 842 194 111 16 chr15 58940136 58940325 -44554649 + B3 SINE B2 1 207 -9 7 1034 321 131 24 12 chr15 58940327 58940412 -44554562 + (TA)n Simple_repeat Simple_repeat 1 86 0 7 1034 325 227 33 44 chr15 58940426 58940649 -44554325 + (TATAA)n Simple_repeat Simple_repeat 1 220 0 7 1034 28 29 0 0 chr15 58941110 58941145 -44553829 + AT_rich Low_complexity Low_complexity 1 35 0 7 1034 341 248 102 42 chr15 58941373 58941491 -44553483 - B1F2 SINE Alu -2 147 23 7 1034 440 196 116 45 chr15 58941398 58941510 -44553464 - ID_B1 SINE B4 -27 197 78 7 1034 180 319 58 0 chr15 58941603 58941672 -44553302 + MIRc SINE MIR 77 149 -119 7 1034 1422 50 0 0 chr15 58941900 58942079 -44552895 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 7 1034 504 86 0 0 chr15 58942079 58942149 -44552825 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 7 1034 1323 81 12 0 chr15 58942153 58942326 -44552648 - B2_Mm1t SINE B2 -18 175 1 7 1034 815 142 28 0 chr15 58942395 58942536 -44552438 + URR1A DNA MER1_type 82 226 0 7 1034 588 226 7 42 chr15 58943100 58943183 -44551791 + B4A SINE B4 5 82 -210 7 1034 225 303 0 38 chr15 58943183 58943262 -44551712 + B1F2 SINE Alu 1 76 -73 7 1034 203 61 30 0 chr15 58943393 58943426 -44551548 + (TC)n Simple_repeat Simple_repeat 2 35 0 7 1034 1186 212 5 10 chr15 58943699 58943908 -44551066 - B3 SINE B2 0 216 9 7 1034 569 209 9 0 chr15 58943937 58944052 -44550922 + PB1D10 SINE Alu 1 116 -1 7 1034 612 211 9 17 chr15 58944142 58944258 -44550716 - B1F SINE Alu -1 148 34 7 1034 1897 172 75 17 chr15 58944690 58944745 -44550229 - RLTR14 LTR ERV1 0 382 331 7 1034 1962 98 55 62 chr15 58944745 58945070 -44549904 - ORR1A4 LTR MaLR -4 325 3 7 1034 1897 172 75 17 chr15 58945070 58945375 -44549599 - RLTR14 LTR ERV1 -52 330 2 7 1034 1821 144 118 9 chr15 58945772 58946094 -44548880 - ORR1B2 LTR MaLR -8 359 3 7 1034 189 266 123 15 chr15 58946140 58946205 -44548769 - MIRm SINE MIR -101 175 104 7 1034 214 292 111 0 chr15 58946494 58946566 -44548408 - L3 LINE CR1 -1 4488 4409 7 1034 759 239 69 5 chr15 58947404 58947606 -44547368 - B3 SINE B2 0 216 2 7 1034 1074 216 20 0 chr15 58947631 58947835 -44547139 - B3 SINE B2 -8 208 1 7 1034 918 155 48 4 chr15 58947877 58948149 -44546825 - Lx4A LINE L1 0 7058 6750 7 1034 1712 106 0 0 chr15 58948143 58948378 -44546596 + Lx4A LINE L1 6530 6764 -294 7 1034 27 29 0 0 chr15 58948380 58948414 -44546560 + AT_rich Low_complexity Low_complexity 1 34 0 7 1034 229 154 135 0 chr15 58948675 58948727 -44546247 + L1MA9 LINE L1 6037 6095 -217 7 1034 347 230 39 117 chr15 58948771 58948899 -44546075 + MT2B LTR ERVL 161 278 -323 7 1034 758 184 22 22 chr15 58948784 58948923 -44546051 + B1_Mur3 SINE Alu 11 149 0 7 1034 186 103 0 0 chr15 58948932 58948961 -44546013 + (ATG)n Simple_repeat Simple_repeat 2 30 0 7 1034 886 260 106 50 chr15 58948969 58949329 -44545645 - Lx8 LINE L1 -2 7471 7092 7 1034 788 302 49 8 chr15 58949348 58949615 -44545359 - Lx8 LINE L1 -451 7022 6745 7 1034 423 212 15 22 chr15 58949660 58949795 -44545179 + L1MA9 LINE L1 6178 6311 -1 7 1034 259 277 36 12 chr15 58950143 58950227 -44544747 - Charlie8 DNA MER1_type -2228 200 115 7 1034 1128 88 0 13 chr15 58950239 58950388 -44544586 + B1_Mus1 SINE Alu 2 148 0 7 1034 636 254 28 22 chr15 58950457 58950638 -44544336 - B3A SINE B2 -16 182 1 7 1034 1183 55 7 0 chr15 58950673 58950818 -44544156 - B1_Mm SINE Alu 0 147 2 7 1034 1657 26 0 16 chr15 58950827 58951020 -44543954 - B2_Mm1a SINE B2 -3 190 1 7 1034 1758 166 110 43 chr15 58951159 58951550 -44543424 - MTC LTR MaLR 0 421 5 7 1034 275 288 49 0 chr15 58951738 58951849 -44543125 + MLT1A1 LTR MaLR 6 126 -233 7 1034 497 51 39 39 chr15 58952023 58952125 -44542849 + (TCTG)n Simple_repeat Simple_repeat 2 103 0 7 1034 300 349 10 42 chr15 58952280 58952446 -44542528 + MIR3 SINE MIR 8 177 -99 7 1034 207 0 0 0 chr15 58952804 58952827 -44542147 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1034 311 167 15 0 chr15 58953349 58953415 -44541559 + CT-rich Low_complexity Low_complexity 3 69 0 7 1034 1203 262 69 20 chr15 58953438 58953785 -44541189 + MTEa LTR MaLR 3 366 -13 7 1034 230 255 266 0 chr15 58953916 58954010 -44540964 - PB1D9 SINE Alu 0 120 2 8 1034 270 136 0 0 chr15 58954099 58954143 -44540831 + (TTGG)n Simple_repeat Simple_repeat 4 47 0 8 1034 1603 167 66 13 chr15 58955002 58955231 -44539743 + ORR1D1 LTR MaLR 1 228 -146 8 1034 189 0 0 0 chr15 58955231 58955252 -44539722 + (CCTG)n Simple_repeat Simple_repeat 2 22 0 8 1034 1603 167 66 13 chr15 58955252 58955325 -44539649 + ORR1D1 LTR MaLR 229 317 -57 8 1034 8423 37 3 1 chr15 58955333 58956380 -44538594 - L1Md_F2 LINE L1 -10 6572 5524 8 1034 409 154 2 5 chr15 58956380 58956464 -44538510 + ORR1D1 LTR MaLR 288 374 0 8 1034 287 170 0 0 chr15 58956472 58956519 -44538455 + MIRc SINE MIR 111 157 -111 8 1034 216 182 0 0 chr15 58957353 58957397 -44537577 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 1034 401 301 20 93 chr15 58957507 58957657 -44537317 - B4A SINE B4 -122 170 32 8 1034 230 364 11 0 chr15 58958170 58958258 -44536716 - MER106B DNA MER1_type -63 996 908 8 1034 283 274 83 33 chr15 58958277 58958398 -44536576 + B1F SINE Alu 21 147 -2 8 1034 246 341 0 0 chr15 58958408 58958490 -44536484 + ID4 SINE ID 2 83 0 8 1034 805 85 0 8 chr15 58958505 58958611 -44536363 + B1_Mur4 SINE Alu 34 138 -12 8 1034 333 0 0 0 chr15 58958611 58958648 -44536326 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 8 1034 805 85 0 8 chr15 58958648 58958659 -44536315 + B1_Mur4 SINE Alu 139 149 -1 8 1034 331 299 197 72 chr15 58958818 58959484 -44535490 - L1MEf LINE L1 -4278 2824 2076 8 1034 264 270 110 0 chr15 58959697 58959797 -44535177 - L1MEf LINE L1 -5788 1546 1436 8 1034 2254 154 56 15 chr15 58960167 58960563 -44534411 + MTC LTR MaLR 5 416 -5 8 1034 766 207 143 5 chr15 58960772 58960961 -44534013 - B3 SINE B2 -1 215 1 8 1034 656 236 16 0 chr15 58960982 58961105 -44533869 + RSINE1 SINE B4 5 129 -36 8 1034 282 95 0 0 chr15 58961124 58961166 -44533808 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 1034 23 0 0 0 chr15 58962412 58962435 -44532539 + AT_rich Low_complexity Low_complexity 1 23 0 8 1034 870 248 19 5 chr15 58962854 58963061 -44531913 - B3 SINE B2 -6 210 1 8 1034 408 55 0 0 chr15 58963312 58963367 -44531607 + (TG)n Simple_repeat Simple_repeat 2 56 0 8 1034 321 263 237 0 chr15 58963419 58963537 -44531437 - B1F1 SINE Alu -2 147 2 8 1034 582 312 31 0 chr15 58963537 58963619 -44531355 - B4 SINE B4 -205 87 1 8 1034 396 0 0 0 chr15 58963792 58963836 -44531138 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 1034 1149 148 119 0 chr15 58963853 58964055 -44530919 + URR1A DNA MER1_type 1 226 0 8 1034 621 236 147 0 chr15 58964119 58964310 -44530664 - MLT2B1 LTR ERVL 0 567 349 8 1034 552 189 70 47 chr15 58964290 58964418 -44530556 + B1_Mur2 SINE Alu 18 148 -1 8 1034 624 301 57 5 chr15 58964424 58964618 -44530356 - MLT2B1 LTR ERVL -207 313 110 8 1034 486 316 29 0 chr15 58964626 58964762 -44530212 + ID_B1 SINE B4 82 221 -3 8 1034 541 200 2 8 chr15 58964740 58964871 -44530103 - MLT2B1 LTR ERVL -426 128 2 8 1034 279 354 22 80 chr15 58964965 58965103 -44529871 - B3A SINE B2 -14 184 55 8 1034 242 222 139 0 chr15 58965237 58965309 -44529665 + BC1_Mm scRNA scRNA 10 91 -61 8 1034 365 212 0 86 chr15 58965316 58965409 -44529565 + B3A SINE B2 1 85 -113 8 1034 870 100 0 0 chr15 58965417 58965557 -44529417 + (CA)n Simple_repeat Simple_repeat 2 141 0 8 1034 264 77 0 0 chr15 58965563 58965602 -44529372 + (TA)n Simple_repeat Simple_repeat 2 40 0 8 1034 808 239 0 25 chr15 58966015 58966174 -44528800 + RSINE1 SINE B4 11 165 0 8 1034 1140 111 0 3 chr15 58966174 58966462 -44528512 + (CA)n Simple_repeat Simple_repeat 1 287 0 8 1034 253 304 0 0 chr15 58966986 58967055 -44527919 - ID4_ SINE ID -13 70 2 8 1034 2133 157 178 54 chr15 58967501 58968115 -44526859 + RMER6C LTR ERVK 1 690 0 8 1034 276 30 0 0 chr15 58968962 58968995 -44525979 + (TG)n Simple_repeat Simple_repeat 1 33 0 8 1034 378 319 25 41 chr15 58968999 58969120 -44525854 - B4 SINE B4 -14 278 160 8 1034 246 269 44 15 chr15 58969118 58969186 -44525788 - RSINE1 SINE B4 -93 72 3 8 1034 242 56 28 0 chr15 58969433 58969469 -44525505 + (TTG)n Simple_repeat Simple_repeat 2 38 0 8 1034 419 200 0 0 chr15 58969474 58969544 -44525430 - ID4 SINE ID -12 71 2 8 1034 540 264 160 90 chr15 58970413 58970901 -44524073 + L1MC4 LINE L1 6755 7276 -766 8 1034 341 345 89 25 chr15 58970947 58971182 -44523792 + L1MC4 LINE L1 7365 7614 -428 8 1034 1102 68 14 14 chr15 58971270 58971418 -44523556 - B1_Mus1 SINE Alu 0 148 1 8 1034 198 60 70 56 chr15 58971495 58971566 -44523408 + (CAAA)n Simple_repeat Simple_repeat 1 72 0 8 1034 189 147 0 0 chr15 58971580 58971614 -44523360 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 8 1034 395 247 34 0 chr15 58971638 58971727 -44523247 + RSINE1 SINE B4 12 103 -62 8 1034 681 12 0 0 chr15 58971745 58971829 -44523145 - L1Md_T LINE L1 -3 6579 6496 8 1034 24 0 0 0 chr15 58971895 58971919 -44523055 + AT_rich Low_complexity Low_complexity 1 24 0 8 1034 348 176 29 0 chr15 58971926 58971994 -44522980 - PB1D9 SINE Alu -2 118 49 8 1034 23 0 0 0 chr15 58972054 58972077 -44522897 + AT_rich Low_complexity Low_complexity 1 23 0 8 1034 270 263 61 132 chr15 58972084 58972198 -44522776 - PB1D9 SINE Alu -2 118 13 8 1034 1045 211 226 22 chr15 58972296 58972611 -44522363 + MTE2b LTR MaLR 1 379 0 8 1034 619 247 27 7 chr15 58972697 58972844 -44522130 + RSINE1 SINE B4 3 152 -13 8 1034 303 28 0 0 chr15 58972855 58972891 -44522083 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 8 1034 306 0 0 0 chr15 58973200 58973234 -44521740 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 1034 229 283 117 8 chr15 58973346 58973474 -44521500 - L1M5 LINE L1 -388 5736 5595 8 1034 239 321 35 86 chr15 58973723 58973757 -44521217 + MT2B LTR ERVL 131 158 -443 8 1034 760 207 14 14 chr15 58973757 58973904 -44521070 + B1_Mur4 SINE Alu 4 150 0 8 1034 309 51 0 0 chr15 58973967 58974006 -44520968 + (TTA)n Simple_repeat Simple_repeat 2 40 0 8 1034 2056 124 20 73 chr15 58974514 58974741 -44520233 - ORR1A1 LTR MaLR -8 338 112 8 1034 1019 46 115 0 chr15 58974741 58974871 -44520103 - B1_Mm SINE Alu 0 147 3 8 1034 2056 124 20 73 chr15 58974871 58975000 -44519974 - ORR1A1 LTR MaLR -235 111 1 8 1034 431 63 16 0 chr15 58975261 58975324 -44519650 + (TC)n Simple_repeat Simple_repeat 2 65 0 8 1034 199 336 138 26 chr15 58975430 58975546 -44519428 + MIRb SINE MIR 2 130 -138 8 1034 362 319 54 20 chr15 58975612 58975752 -44519222 + LTR79 LTR ERVL 10 155 -372 8 1034 297 0 0 0 chr15 58975752 58975785 -44519189 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1034 598 145 13 0 chr15 58975880 58976032 -44518942 + (TCTA)n Simple_repeat Simple_repeat 3 156 0 8 1034 1000 40 0 8 chr15 58976304 58976420 -44518554 + B1_Mm SINE Alu 22 137 -10 8 1034 269 26 26 0 chr15 58976420 58976458 -44518516 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 8 1034 920 162 3 2 chr15 58976889 58977284 -44517690 + (CA)n Simple_repeat Simple_repeat 1 395 0 8 1034 1152 36 7 14 chr15 58977620 58977762 -44517212 + B1_Mus1 SINE Alu 2 142 -6 8 1034 243 0 0 0 chr15 58977766 58977793 -44517181 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 8 1034 216 368 0 0 chr15 58977854 58977930 -44517044 + (CA)n Simple_repeat Simple_repeat 2 77 0 8 1034 513 223 32 16 chr15 58978120 58978243 -44516731 + RSINE1 SINE B4 8 132 -33 8 1034 180 319 69 0 chr15 58978265 58978337 -44516637 - MIRm SINE MIR -33 243 167 8 1034 22 0 0 0 chr15 58978443 58978465 -44516509 + GC_rich Low_complexity Low_complexity 1 22 0 8 1034 207 0 0 0 chr15 58978669 58978692 -44516282 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 1034 457 152 0 0 chr15 58978711 58978777 -44516197 - PB1D10 SINE Alu -12 105 40 8 1034 252 262 16 0 chr15 58978726 58978787 -44516187 - 4.5SRNA scRNA scRNA -6 88 27 8 1034 220 278 0 0 chr15 58978813 58978867 -44516107 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 1034 696 315 145 3 chr15 58979242 58979532 -44515442 + MER2 DNA MER2_type 15 345 0 8 1034 185 293 42 42 chr15 58979540 58979636 -44515338 + MIRb SINE MIR 99 194 -74 8 1034 231 287 11 84 chr15 58979781 58979876 -44515098 + MLT1K LTR MaLR 190 277 -318 8 1034 1325 282 81 5 chr15 58980735 58981130 -44513844 - MER63B DNA AcHobo -11 425 1 8 1034 567 345 56 38 chr15 58981285 58981626 -44513348 - ORR1E LTR MaLR -9 350 4 8 1034 241 294 77 49 chr15 58982074 58982217 -44512757 - LTR33 LTR ERVL -2 513 367 8 1035 435 19 0 0 chr15 58982452 58982504 -44512470 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 1035 1131 66 0 0 chr15 58982973 58983110 -44511864 + B1_Mus1 SINE Alu 2 138 -10 8 1035 180 0 0 0 chr15 58983110 58983130 -44511844 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 1035 1368 205 38 84 chr15 58983662 58984088 -44510886 - RMER10A LTR ERVL -4 438 33 8 1035 842 293 161 5 chr15 58984347 58984725 -44510249 - MLT1C LTR MaLR -30 437 1 8 1035 207 308 159 55 chr15 58985769 58985951 -44509023 - MIR SINE MIR -34 228 28 8 1035 364 289 136 71 chr15 58986696 58987035 -44507939 + LTR16A1 LTR ERVL 7 367 -89 8 1035 230 106 0 21 chr15 58987041 58987089 -44507885 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1035 303 268 150 75 chr15 58987158 58987291 -44507683 - B1F1 SINE Alu -6 143 1 8 1035 344 169 17 0 chr15 58987295 58987354 -44507620 - B4A SINE B4 -227 65 6 8 1035 426 216 116 41 chr15 58987398 58987519 -44507455 + B3A SINE B2 1 130 -68 8 1035 286 222 111 0 chr15 58987796 58987859 -44507115 + RMER30 DNA MER1_type 133 202 0 8 1035 282 320 170 65 chr15 58987948 58988418 -44506556 + LTR50 LTR ERVL 45 508 -12 8 1035 266 329 0 0 chr15 58988779 58988861 -44506113 + ID4 SINE ID 1 82 -1 8 1035 218 299 199 22 chr15 58988992 58989218 -44505756 + MIRb SINE MIR 1 266 -2 9 1035 552 152 28 9 chr15 58989960 58990066 -44504908 - URR1A DNA MER1_type -55 171 64 9 1035 606 322 0 22 chr15 58990871 58991055 -44503919 + Tigger5 DNA MER2_type 2148 2327 -79 9 1035 268 310 0 128 chr15 58991187 58991320 -44503654 + MER20B DNA MER1_type 1 116 -667 9 1035 1839 186 27 32 chr15 58991387 58991759 -44503215 - ORR1D1 LTR MaLR -4 370 1 9 1035 341 317 143 39 chr15 58991901 58992131 -44502843 + MER45C DNA Tip100 27 280 -673 9 1035 264 291 56 44 chr15 58992172 58992262 -44502712 + MER45C DNA Tip100 712 802 -151 9 1035 450 0 0 0 chr15 58992263 58992313 -44502661 + (GA)n Simple_repeat Simple_repeat 1 50 0 9 1035 351 265 0 0 chr15 58992317 58992385 -44502589 - RSINE1 SINE B4 -19 146 79 9 1035 1579 239 51 36 chr15 58992437 58992793 -44502181 + ORR1D2 LTR MaLR 3 363 -7 9 1035 315 268 105 75 chr15 58992839 58992972 -44502002 - B4A SINE B4 -155 137 1 9 1035 269 330 58 50 chr15 58993080 58993201 -44501773 + MLT1A LTR MaLR 1 122 -252 9 1035 600 266 22 0 chr15 58993211 58993350 -44501624 + ORR1E LTR MaLR 1 142 -217 9 1035 2114 95 3 71 chr15 58993360 58993710 -44501264 - IAPLTR1a_Mm LTR ERVK -11 326 1 9 1035 8872 37 9 0 chr15 58993710 58994737 -44500237 - IAPEz-int LTR ERVK 0 6481 5446 9 1035 34232 10 1 0 chr15 58994736 58998442 -44496532 - IAPEz-int LTR ERVK -2764 3717 9 9 1035 2124 105 3 70 chr15 58998442 58998801 -44496173 - IAPLTR1a_Mm LTR ERVK -2 335 1 9 1035 269 298 14 109 chr15 58998843 58998990 -44495984 + ORR1E LTR MaLR 203 335 -44 9 1035 250 160 22 0 chr15 58999035 58999082 -44495892 - B3A SINE B2 -142 53 1 9 1035 256 296 40 101 chr15 58999209 58999347 -44495627 + MLT1A1 LTR MaLR 302 450 -17 9 1035 521 322 69 18 chr15 58999591 58999809 -44495165 + LTR82B Low_complexity ERVL 567 795 -35 9 1035 580 252 134 71 chr15 59001353 59001622 -44493352 - B4 SINE B4 0 292 7 1 1035 265 153 14 14 chr15 59002151 59002224 -44492750 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 1035 306 0 0 0 chr15 59002224 59002258 -44492716 + (GA)n Simple_repeat Simple_repeat 1 34 0 3 1035 779 340 137 64 chr15 59002540 59003378 -44491596 + L1MEg LINE L1 90 988 -5096 4 1035 381 286 61 7 chr15 59003677 59003825 -44491149 + L1ME3A LINE L1 5839 5994 -179 5 1035 690 140 0 0 chr15 59003947 59004061 -44490913 + (TCCC)n Simple_repeat Simple_repeat 3 116 0 6 1035 1175 81 0 0 chr15 59004077 59004225 -44490749 - B1_Mus1 SINE Alu 0 148 1 7 1035 451 280 115 33 chr15 59004283 59004405 -44490569 + RSINE1 SINE B4 9 140 -25 8 1035 181 315 94 85 chr15 59004489 59004738 -44490236 - L2c LINE L2 -335 3052 2795 9 1035 275 292 113 17 chr15 59004827 59004878 -44490096 + B4A SINE B4 163 214 -78 1 1035 200 31 62 0 chr15 59004878 59004910 -44490064 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1 1035 275 292 113 17 chr15 59004910 59004973 -44490001 + B4A SINE B4 215 287 -5 1 1035 278 352 96 24 chr15 59006502 59006534 -44488440 - L2a LINE L2 -4 3422 3391 1 1035 1500 144 130 62 chr15 59006534 59006918 -44488056 - RMER17C LTR ERVK 0 410 1 1 1035 278 352 96 24 chr15 59006918 59007010 -44487964 - L2a LINE L2 -36 3390 3290 1 1035 1100 189 11 5 chr15 59007043 59007234 -44487740 + B3 SINE B2 1 192 -24 1 1035 30 45 0 0 chr15 59007541 59007585 -44487389 + AT_rich Low_complexity Low_complexity 1 44 0 1 1035 716 175 25 0 chr15 59007585 59007705 -44487269 + B1_Mus1 SINE Alu 25 147 -1 1 1035 1096 184 24 24 chr15 59007711 59007923 -44487051 - B3 SINE B2 0 216 5 1 1035 976 269 45 59 chr15 59007953 59008396 -44486578 - L1MD LINE L1 -1718 4428 3992 1 1035 246 227 0 0 chr15 59008423 59008498 -44486476 + (CATATA)n Simple_repeat Simple_repeat 4 78 0 1 1035 971 135 24 41 chr15 59011043 59011213 -44483761 - URR1A DNA MER1_type 0 226 60 2 1035 271 294 71 59 chr15 59011350 59011520 -44483454 - MIRb SINE MIR -1 267 96 2 1035 314 78 38 38 chr15 59012161 59012214 -44482760 + B1_Mus1 SINE Alu 8 60 -88 2 1035 395 0 0 163 chr15 59012216 59012863 -44482111 + (CAGAG)n Simple_repeat Simple_repeat 1 541 0 2 1035 681 89 19 29 chr15 59012908 59012924 -44482050 + B1_Mur3 SINE Alu 42 55 -94 2 1035 1014 157 0 0 chr15 59012924 59013102 -44481872 + (CAGAGA)n Simple_repeat Simple_repeat 1 178 0 2 1035 681 89 19 29 chr15 59013102 59013189 -44481785 + B1_Mur3 SINE Alu 56 144 -5 2 1035 416 326 13 40 chr15 59013232 59013382 -44481592 - RSINE1 SINE B4 0 165 20 2 1035 339 319 100 48 chr15 59013515 59013785 -44481189 - L1MC4a LINE L1 -1987 5895 5612 2 1035 261 322 89 66 chr15 59013865 59014078 -44480896 + YREP_Mm Unknown Unknown 77 294 -1518 2 1035 887 118 0 0 chr15 59013957 59014084 -44480890 - B1_Mur2 SINE Alu -6 143 17 2 1035 1079 252 53 15 chr15 59015623 59015889 -44479085 + B4A SINE B4 2 277 -15 3 1035 210 270 26 51 chr15 59016406 59016484 -44478490 + MIRb SINE MIR 126 201 -67 3 1035 1536 206 136 19 chr15 59016705 59017072 -44477902 - MTD LTR MaLR 0 419 10 3 1035 594 325 76 48 chr15 59017123 59017414 -44477560 - MLT1F LTR MaLR -22 526 228 3 1035 343 256 0 44 chr15 59017471 59017561 -44477413 + MLT1F LTR MaLR 50 135 -413 3 1035 1078 192 63 19 chr15 59017632 59017839 -44477135 - B3 SINE B2 0 216 1 3 1035 490 292 133 12 chr15 59017972 59018145 -44476829 - MLT1F LTR MaLR -331 217 24 3 1035 234 324 87 19 chr15 59018747 59018851 -44476123 - ORR1E LTR MaLR -170 189 79 3 1035 221 329 119 34 chr15 59018986 59019162 -44475812 + L3 LINE CR1 3956 4146 -343 3 1035 208 299 210 7 chr15 59019185 59019323 -44475651 + MIRc SINE MIR 10 175 -93 3 1035 409 315 118 29 chr15 59019478 59019648 -44475326 - MIRb SINE MIR -48 220 36 3 1035 206 143 39 39 chr15 59020693 59020744 -44474230 + G-rich Low_complexity Low_complexity 2 52 0 4 1035 261 167 105 53 chr15 59020751 59020827 -44474147 - MTEb LTR MaLR -113 266 187 4 1035 211 186 47 0 chr15 59020962 59021005 -44473969 + (CAGA)n Simple_repeat Simple_repeat 3 47 0 4 1035 525 322 63 46 chr15 59021141 59021379 -44473595 - MTEa LTR MaLR -107 272 31 4 1035 230 322 0 0 chr15 59021521 59021580 -44473394 + MIR SINE MIR 92 150 -112 4 1035 306 0 0 0 chr15 59021760 59021794 -44473180 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1035 519 60 0 0 chr15 59021913 59021980 -44472994 + (GA)n Simple_repeat Simple_repeat 1 67 0 4 1035 380 320 112 18 chr15 59022107 59022393 -44472581 + L2a LINE L2 1743 2055 -1364 4 1035 512 291 116 52 chr15 59022434 59022666 -44472308 - MLT1D LTR MaLR 0 505 259 4 1035 1635 200 16 22 chr15 59022894 59023220 -44471754 + RMER1A Other Other 343 727 -303 4 1035 264 51 26 0 chr15 59023220 59023259 -44471715 + RMER4A LTR ERVK 1 40 -545 5 1035 1027 108 60 7 chr15 59023265 59023414 -44471560 + B2_Mm2 SINE B2 1 157 -38 5 1035 222 37 0 0 chr15 59023414 59023441 -44471533 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1035 903 186 54 5 chr15 59023441 59023475 -44471499 + B2_Mm1t SINE B2 159 192 -1 5 1035 1419 136 10 31 chr15 59023462 59023845 -44471129 + RMER4A LTR ERVK 33 466 0 5 1035 1598 131 45 64 chr15 59023847 59024001 -44470973 + RMER1A Other Other 725 878 -152 4 1035 405 54 0 0 chr15 59024001 59024057 -44470917 + (TGG)n Simple_repeat Simple_repeat 1 56 0 5 1035 1598 131 45 64 chr15 59024057 59024213 -44470761 + RMER1A Other Other 879 1028 -2 4 1035 858 188 121 35 chr15 59024470 59024669 -44470305 + B3 SINE B2 1 216 0 5 1035 250 193 53 0 chr15 59024738 59024795 -44470179 - L1MA5 LINE L1 0 6300 6241 5 1035 320 205 147 66 chr15 59024886 59025022 -44469952 - RSINE1 SINE B4 -17 148 2 5 1035 220 329 151 36 chr15 59025022 59025359 -44469615 + L2a LINE L2 2461 2836 -583 4 1035 272 304 123 43 chr15 59025672 59025946 -44469028 + L2a LINE L2 3082 3374 -13 4 1035 192 97 0 0 chr15 59025951 59025982 -44468992 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 5 1035 205 350 75 40 chr15 59026530 59026703 -44468271 - MIR SINE MIR -73 195 17 5 1035 345 321 92 61 chr15 59028134 59028460 -44466514 + LTR33 LTR ERVL 109 486 -29 6 1035 698 210 166 5 chr15 59028464 59028651 -44466323 - ID_B1 SINE B4 -7 217 1 6 1035 182 327 56 37 chr15 59029981 59030089 -44464885 + MIR3 SINE MIR 58 167 -41 6 1035 780 283 0 35 chr15 59030091 59030289 -44464685 - B3A SINE B2 -1 197 7 6 1035 284 340 40 20 chr15 59030485 59030635 -44464339 - L2b LINE L2 0 3426 3240 6 1035 784 299 79 48 chr15 59030727 59030840 -44464134 + MLT1C LTR MaLR 63 173 -294 6 1035 1548 230 63 27 chr15 59030840 59031206 -44463768 + MTE2b LTR MaLR 1 379 0 6 1035 784 299 79 48 chr15 59031206 59031297 -44463677 + MLT1C LTR MaLR 174 271 -196 6 1035 1885 124 105 35 chr15 59031297 59031640 -44463334 - ORR1B2 LTR MaLR 0 367 1 6 1035 784 299 79 48 chr15 59031640 59031750 -44463224 + MLT1C LTR MaLR 272 388 -79 6 1035 1776 324 52 25 chr15 59031860 59032488 -44462486 + MER82 DNA MER2_type 7 651 -2 6 1035 219 310 17 0 chr15 59032488 59032546 -44462428 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1035 187 333 116 33 chr15 59032616 59032737 -44462237 - L2b LINE L2 -250 3137 3007 6 1035 1209 216 157 31 chr15 59032742 59033067 -44461907 + ORR1D2 LTR MaLR 1 366 -4 7 1035 405 58 0 0 chr15 59034571 59034623 -44460351 + (TCC)n Simple_repeat Simple_repeat 2 53 0 7 1035 275 241 58 35 chr15 59035127 59035213 -44459761 - MIRc SINE MIR -35 233 146 7 1035 282 346 75 37 chr15 59035396 59035717 -44459257 - L1MB3 LINE L1 -7 6176 5844 7 1035 366 277 110 33 chr15 59035888 59036103 -44458871 - ORR1E LTR MaLR -133 245 1 7 1035 227 295 42 0 chr15 59036117 59036212 -44458762 - L1MB3 LINE L1 -404 5779 5681 7 1035 1248 90 45 0 chr15 59036355 59036533 -44458441 + B2_Mm2 SINE B2 1 186 -9 7 1035 283 312 26 0 chr15 59036554 59036631 -44458343 + MIRc SINE MIR 44 122 -146 7 1035 209 311 156 19 chr15 59036955 59037109 -44457865 + MIR3 SINE MIR 2 176 -32 7 1035 240 306 66 60 chr15 59037148 59037315 -44457659 + MIRb SINE MIR 22 189 -79 7 1035 309 333 50 17 chr15 59037701 59037820 -44457154 + L1MC4a LINE L1 5515 5637 -487 7 1035 282 312 42 35 chr15 59037923 59038066 -44456908 + L1MC4a LINE L1 5784 5927 -1955 7 1035 1628 223 62 18 chr15 59038172 59038560 -44456414 + MTD LTR MaLR 1 405 -14 8 1035 328 218 38 13 chr15 59038573 59038652 -44456322 + B4 SINE B4 17 97 -195 8 1035 554 256 31 0 chr15 59038659 59038788 -44456186 + RSINE1 SINE B4 12 144 -21 8 1035 882 25 227 0 chr15 59038838 59038957 -44456017 + B1_Mm SINE Alu 2 147 0 8 1035 257 303 43 43 chr15 59039002 59039095 -44455879 + B4 SINE B4 133 225 -67 8 1035 1219 110 5 21 chr15 59039237 59039423 -44455551 + B2_Mm1a SINE B2 1 183 -10 8 1035 188 67 0 32 chr15 59039580 59039611 -44455363 + (GGGGA)n Simple_repeat Simple_repeat 3 32 0 8 1035 1028 70 23 30 chr15 59039967 59040402 -44454572 + (TCTA)n Simple_repeat Simple_repeat 1 431 0 8 1035 943 68 22 22 chr15 59040416 59040595 -44454379 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 8 1035 246 203 148 33 chr15 59041728 59041789 -44453185 + RLTR20C LTR ERVK 74 141 -393 8 1035 779 253 42 5 chr15 59041831 59042022 -44452952 - MTE2b LTR MaLR -59 320 123 8 1035 369 0 0 0 chr15 59043538 59043579 -44451395 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 1035 432 0 0 0 chr15 59043579 59043626 -44451348 + (GA)n Simple_repeat Simple_repeat 1 48 0 9 1035 239 114 0 22 chr15 59044389 59044434 -44450540 + (TGGGGG)n Simple_repeat Simple_repeat 1 44 0 9 1035 317 237 31 156 chr15 59044449 59044609 -44450365 - LTR16E1 LTR ERVL 0 568 413 9 1035 390 348 64 0 chr15 59044933 59045137 -44449837 + MIRb SINE MIR 24 240 -28 9 1035 215 340 39 20 chr15 59045370 59045472 -44449502 + MIRb SINE MIR 27 130 -138 9 1035 243 0 0 0 chr15 59045670 59045697 -44449277 + (TCTA)n Simple_repeat Simple_repeat 2 28 0 9 1035 438 75 0 0 chr15 59045697 59045763 -44449211 + (TG)n Simple_repeat Simple_repeat 2 68 0 9 1035 455 245 103 9 chr15 59045770 59045877 -44449097 - RSINE1 SINE B4 -47 118 2 9 1035 1141 232 3 0 chr15 59046210 59046527 -44448447 + MTEb LTR MaLR 1 379 0 9 1035 367 286 25 11 chr15 59046570 59046703 -44448271 - L1M5 LINE L1 -628 5614 5483 9 1035 328 266 21 31 chr15 59046776 59046873 -44448101 + MTD LTR MaLR 3 98 -321 1 1035 229 356 0 14 chr15 59047189 59047263 -44447711 - B4A SINE B4 0 292 220 1 1035 244 172 52 0 chr15 59047290 59047348 -44447626 + G-rich Low_complexity Low_complexity 4 64 0 1 1035 902 261 30 37 chr15 59047449 59047720 -44447254 - B4A SINE B4 -21 271 3 1 1035 849 339 51 26 chr15 59048090 59048481 -44446493 + MLT1C LTR MaLR 59 459 -8 1 1035 2098 150 47 3 chr15 59048608 59048970 -44446004 + ORR1C1 LTR MaLR 1 378 0 1 1035 269 276 13 26 chr15 59049174 59049252 -44445722 + MLT1C LTR MaLR 534 610 0 1 1035 376 323 23 68 chr15 59049411 59049587 -44445387 + MER97c DNA MER1_type? 8 175 -915 1 1035 251 299 119 18 chr15 59049644 59049753 -44445221 + L3 LINE CR1 4242 4361 -128 1 1035 849 241 9 49 chr15 59050076 59050299 -44444675 + B3 SINE B2 2 215 -1 1 1035 181 279 173 25 chr15 59050603 59050684 -44444290 - MIRb SINE MIR -98 170 78 1 1035 987 281 30 21 chr15 59050725 59051063 -44443911 + Lx9 LINE L1 7166 7506 -138 1 1035 338 221 70 19 chr15 59051101 59051258 -44443716 + Lx9 LINE L1 7458 7622 -22 1 1035 21 57 0 0 chr15 59051282 59051317 -44443657 + AT_rich Low_complexity Low_complexity 1 35 0 1 1035 307 333 25 33 chr15 59051588 59051709 -44443265 - MLT1I LTR MaLR -214 197 78 1 1035 1171 99 12 0 chr15 59051918 59052079 -44442895 + B2_Mm1t SINE B2 17 179 -14 1 1035 616 151 225 50 chr15 59052094 59052254 -44442720 + B2_Mm2 SINE B2 1 188 -7 1 1035 432 0 0 0 chr15 59052516 59052564 -44442410 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 1035 291 28 0 0 chr15 59052564 59052599 -44442375 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1035 345 242 0 0 chr15 59052740 59052831 -44442143 + (TA)n Simple_repeat Simple_repeat 1 91 0 1 1035 475 127 0 21 chr15 59052832 59052925 -44442049 - B1_Mur3 SINE Alu -11 138 53 1 1035 219 305 11 89 chr15 59053042 59053132 -44441842 - ID4_ SINE ID 0 83 1 1 1035 2154 142 8 52 chr15 59053400 59053787 -44441187 - ORR1C1 LTR MaLR -8 370 1 1 1035 378 266 87 14 chr15 59053883 59054066 -44440908 + L1MB5 LINE L1 5657 5850 -329 1 1035 30 27 0 0 chr15 59054066 59054103 -44440871 + AT_rich Low_complexity Low_complexity 1 37 0 1 1035 553 212 114 24 chr15 59054107 59054297 -44440677 + L1MB8 LINE L1 5821 6043 -141 1 1035 293 276 111 10 chr15 59054622 59054721 -44440253 - MER63B DNA AcHobo -9 427 319 1 1035 249 200 28 14 chr15 59054971 59055042 -44439932 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 1035 895 293 38 14 chr15 59055864 59056151 -44438823 - RMER15 LTR ERVL -6 569 276 1 1035 473 258 43 62 chr15 59056152 59056313 -44438661 - RMER15 LTR ERVL -417 158 1 1 1035 183 302 31 16 chr15 59056545 59056609 -44438365 - MIR SINE MIR -12 250 186 1 1035 4394 183 47 76 chr15 59057237 59058312 -44436662 + RMER12 LTR ERVK 1 1306 -266 1 1035 261 0 0 0 chr15 59058312 59058341 -44436633 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 1035 682 239 141 130 chr15 59058341 59058550 -44436424 + RMER12 LTR ERVK 1307 1572 0 1 1035 552 328 19 26 chr15 59059115 59059325 -44435649 - MLT1A0 LTR MaLR -4 386 182 1 1035 1738 184 41 44 chr15 59059582 59059945 -44435029 + MTD LTR MaLR 1 362 -57 1 1035 2407 90 9 30 chr15 59060325 59060658 -44434316 + ORR1A3 LTR MaLR 1 326 0 1 1035 342 0 0 0 chr15 59061055 59061093 -44433881 + (CTG)n Simple_repeat Simple_repeat 1 38 0 1 1035 548 230 48 58 chr15 59061316 59061505 -44433469 - RLTR23 LTR ERV1 0 430 244 1 1035 247 326 67 103 chr15 59062461 59062656 -44432318 + MIR SINE MIR 65 252 -10 1 1035 990 139 202 31 chr15 59062951 59063078 -44431896 + URR1A DNA MER1_type 1 166 -60 1 1035 2913 126 50 6 chr15 59063078 59063556 -44431418 - RLTR19 LTR ERVK 0 499 1 1 1035 990 139 202 31 chr15 59063556 59063621 -44431353 + URR1A DNA MER1_type 167 226 0 1 1035 703 236 0 7 chr15 59063629 59063770 -44431204 + B1F SINE Alu 5 144 -5 1 1035 310 308 56 99 chr15 59063633 59063795 -44431179 + B4A SINE B4 94 248 -44 1 1035 864 169 411 10 chr15 59063801 59064093 -44430881 - RLTR25B LTR ERVK 0 1028 620 1 1035 1168 185 8 4 chr15 59064071 59064332 -44430642 - ORR1A3-int LTR MaLR -999 964 703 1 1035 1286 145 65 96 chr15 59064275 59064535 -44430439 - MT2B LTR ERVL -314 287 36 1 1035 901 168 109 61 chr15 59064393 59064640 -44430334 - ORR1A3-int LTR MaLR -1205 758 500 1 1035 582 221 50 35 chr15 59064528 59064665 -44430309 - RLTR25B LTR ERVK -542 561 423 1 1035 961 83 15 0 chr15 59064665 59064798 -44430176 - RLTR27 LTR ERVK 0 309 175 1 1035 2189 27 0 0 chr15 59064782 59065043 -44429931 - RLTR10A LTR ERVK -150 261 1 1 1035 2132 177 4 100 chr15 59065044 59065503 -44429471 - RLTR25B LTR ERVK -604 424 10 1 1035 474 289 198 14 chr15 59065504 59065724 -44429250 + B4 SINE B4 31 290 -2 1 1035 226 210 36 6 chr15 59065863 59066034 -44428940 + (TA)n Simple_repeat Simple_repeat 1 176 0 1 1035 323 246 40 88 chr15 59066098 59066223 -44428751 - L1MCa LINE L1 -4552 1956 1838 1 1035 668 305 94 47 chr15 59066512 59066927 -44428047 - RLTR26 LTR ERVK -120 507 1 1 1035 421 322 35 9 chr15 59066943 59067059 -44427915 + B3A SINE B2 50 168 -30 1 1035 335 169 0 14 chr15 59067463 59067535 -44427439 + CT-rich Low_complexity Low_complexity 1 71 0 1 1035 180 0 0 0 chr15 59067584 59067604 -44427370 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1035 228 35 0 0 chr15 59068538 59068567 -44426407 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1035 198 0 0 0 chr15 59068682 59068704 -44426270 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1035 1064 245 53 18 chr15 59068722 59069004 -44425970 - B4A SINE B4 0 292 1 1 1035 972 128 243 6 chr15 59069812 59069985 -44424989 + B3 SINE B2 1 214 -2 1 1035 728 275 74 44 chr15 59071272 59071542 -44423432 - Zaphod DNA Tip100 -231 3800 3523 1 1035 392 265 2 25 chr15 59072145 59072252 -44422722 + B4 SINE B4 142 246 -46 1 1035 927 267 94 57 chr15 59072363 59072768 -44422206 + Lx8 LINE L1 7019 7438 -35 1 1035 605 222 120 40 chr15 59073607 59073757 -44421217 + RSINE1 SINE B4 4 165 0 1 1035 1232 48 0 0 chr15 59073960 59074107 -44420867 + B1_Mm SINE Alu 1 147 0 1 1035 926 130 19 0 chr15 59074107 59074268 -44420706 + (GGAGAA)n Simple_repeat Simple_repeat 5 168 0 1 1035 1250 83 0 11 chr15 59074268 59074450 -44420524 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 1035 383 246 156 30 chr15 59074497 59074728 -44420246 + L1MC5 LINE L1 7624 7883 -78 1 1035 327 25 0 0 chr15 59074763 59074803 -44420171 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1035 453 97 371 19 chr15 59074863 59074968 -44420006 - B2_Mm2 SINE B2 -7 188 47 1 1035 832 57 277 7 chr15 59075019 59075160 -44419814 - B2_Mm1t SINE B2 -14 179 1 1 1035 308 194 16 0 chr15 59075278 59075340 -44419634 - L1M4 LINE L1 -608 5572 5510 1 1035 614 49 0 12 chr15 59075356 59075439 -44419535 + (TTTTC)n Simple_repeat Simple_repeat 4 85 0 1 1035 519 95 0 0 chr15 59075442 59075516 -44419458 + (TCCCC)n Simple_repeat Simple_repeat 3 76 0 1 1035 294 169 0 0 chr15 59075523 59075588 -44419386 + CT-rich Low_complexity Low_complexity 1 65 0 1 1035 1565 42 5 0 chr15 59075662 59075853 -44419121 - B2_Mm1a SINE B2 0 193 2 1 1035 474 296 140 34 chr15 59075853 59076378 -44418596 - L1M4 LINE L1 -755 5428 4846 1 1035 824 298 66 98 chr15 59076400 59076872 -44418102 + L1MB3 LINE L1 5595 6051 -132 1 1035 1586 42 16 0 chr15 59076958 59077147 -44417827 + B2_Mm1a SINE B2 1 192 -1 1 1035 476 241 27 27 chr15 59077387 59077498 -44417476 - PB1D10 SINE Alu 0 117 7 1 1035 328 335 87 7 chr15 59078251 59078401 -44416573 + MIRc SINE MIR 22 186 -82 1 1035 3552 132 23 14 chr15 59078814 59079376 -44415598 - RLTR20D LTR ERVK -1 567 1 1 1035 506 253 68 14 chr15 59079604 59079752 -44415222 - MLT1E LTR MaLR -112 541 386 1 1035 249 83 0 0 chr15 59080127 59080163 -44414811 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1035 294 29 0 0 chr15 59080299 59080334 -44414640 + (GGAA)n Simple_repeat Simple_repeat 1 35 0 1 1035 459 250 0 0 chr15 59081438 59081530 -44413444 - PB1D10 SINE Alu -21 96 5 1 1035 384 234 121 67 chr15 59082216 59082381 -44412593 + MIRb SINE MIR 68 241 -27 1 1035 381 297 16 63 chr15 59083146 59083272 -44411702 + RMER15 LTR ERVL 351 470 -105 1 1035 342 355 41 34 chr15 59083296 59083442 -44411532 - MLT1J LTR MaLR -360 152 6 1 1035 25 51 0 0 chr15 59085083 59085122 -44409852 + AT_rich Low_complexity Low_complexity 1 39 0 1 1035 24 0 0 0 chr15 59086518 59086542 -44408432 + AT_rich Low_complexity Low_complexity 1 24 0 1 1035 592 274 30 0 chr15 59086557 59086692 -44408282 + B3A SINE B2 5 143 -55 1 1035 432 55 0 0 chr15 59086705 59086760 -44408214 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 1035 1328 297 94 89 chr15 59086763 59087657 -44407317 - Charlie1a DNA MER1_type -208 1247 350 1 1035 365 347 67 21 chr15 59087677 59087871 -44407103 - Charlie1a DNA MER1_type -1208 247 45 1 1035 306 256 141 35 chr15 59088381 59088551 -44406423 + L1MD LINE L1 5099 5286 -860 1 1035 266 225 88 0 chr15 59088601 59088681 -44406293 + L1MD2 LINE L1 6269 6355 -4 1 1035 323 303 198 27 chr15 59089492 59089750 -44405224 + L2c LINE L2 2910 3211 -176 1 1035 411 276 8 25 chr15 59090102 59090221 -44404753 + MIR SINE MIR 139 255 -7 1 1035 355 327 128 23 chr15 59090692 59090864 -44404110 + MIRb SINE MIR 16 205 -63 1 1035 1018 316 123 41 chr15 59091147 59091635 -44403339 - MLT1F LTR MaLR 0 548 21 1 1035 206 62 31 0 chr15 59093780 59093812 -44401162 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 1035 312 274 20 40 chr15 59093896 59093995 -44400979 + MIR SINE MIR 75 171 -91 1 1035 189 307 13 13 chr15 59094084 59094160 -44400814 - L2 LINE L2 -650 2769 2694 1 1035 243 133 0 0 chr15 59094717 59094762 -44400212 + (C)n Simple_repeat Simple_repeat 1 45 0 1 1035 592 256 10 107 chr15 59095421 59095618 -44399356 - MER20 DNA MER1_type -13 206 29 2 1035 457 241 27 47 chr15 59096352 59096500 -44398474 - MIR SINE MIR 0 262 118 2 1035 639 310 15 105 chr15 59096529 59096638 -44398336 - MIR SINE MIR 0 262 152 2 1035 1162 45 0 0 chr15 59096638 59096772 -44398202 + B1_Mus2 SINE Alu 2 135 -12 2 1035 807 66 0 0 chr15 59096772 59096878 -44398096 + (GAAA)n Simple_repeat Simple_repeat 1 106 0 2 1035 639 310 15 105 chr15 59096878 59097034 -44397940 - MIR SINE MIR -111 151 21 2 1035 1423 206 11 0 chr15 59097866 59098147 -44396827 + Lx9 LINE L1 7196 7479 -165 2 1035 3138 67 23 16 chr15 59098601 59099044 -44395930 - Lx LINE L1 -1 6653 6208 2 1035 647 216 128 6 chr15 59099436 59099608 -44395366 - B3A SINE B2 -5 193 1 2 1035 322 294 167 26 chr15 59100207 59100399 -44394575 + MER20 DNA MER1_type 1 219 0 2 1035 225 253 54 98 chr15 59100630 59100722 -44394252 - MLT1G LTR MaLR -302 289 202 2 1035 189 0 0 0 chr15 59101348 59101369 -44393605 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1035 225 386 73 34 chr15 59102238 59102415 -44392559 + MLT1I LTR MaLR 85 268 -327 2 1035 332 0 0 44 chr15 59102586 59102631 -44392343 + (TAA)n Simple_repeat Simple_repeat 2 44 0 2 1035 347 338 193 52 chr15 59102706 59103302 -44391672 + MLT1I-int LTR MaLR 492 1171 -216 2 1035 243 0 0 0 chr15 59105363 59105390 -44389584 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1035 323 234 0 0 chr15 59105478 59105542 -44389432 + Lx8 LINE L1 6815 6878 -595 2 1035 1262 264 107 29 chr15 59105576 59106122 -44388852 + Lx8 LINE L1 6881 7468 -5 2 1035 406 279 47 47 chr15 59106335 59106463 -44388511 - MIRb SINE MIR -116 152 25 2 1035 237 229 0 0 chr15 59106816 59106864 -44388110 + MLT1I LTR MaLR 86 133 -278 2 1035 601 202 15 75 chr15 59107525 59107539 -44387435 + RSINE1 SINE B4 15 26 -139 2 1035 225 94 0 0 chr15 59107539 59107571 -44387403 + (TTA)n Simple_repeat Simple_repeat 2 33 0 2 1035 601 202 15 75 chr15 59107571 59107690 -44387284 + RSINE1 SINE B4 27 140 -25 2 1035 623 251 57 72 chr15 59107751 59107944 -44387030 + B3A SINE B2 7 196 -2 2 1035 188 235 15 0 chr15 59107964 59108032 -44386942 + GA-rich Low_complexity Low_complexity 3 71 0 2 1035 801 221 7 0 chr15 59108967 59109103 -44385871 + RSINE1 SINE B4 3 139 -26 2 1035 360 94 0 0 chr15 59109106 59109159 -44385815 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1035 188 235 15 0 chr15 59109340 59109408 -44385566 + GA-rich Low_complexity Low_complexity 3 71 0 2 1035 206 345 225 43 chr15 59111493 59111944 -44383030 + L2c LINE L2 2791 3323 -64 2 1035 189 107 0 0 chr15 59111989 59112017 -44382957 + (CAA)n Simple_repeat Simple_repeat 2 29 0 2 1035 1134 228 102 108 chr15 59112142 59112357 -44382617 - MTD LTR MaLR -14 405 211 2 1035 1101 55 0 58 chr15 59112357 59112512 -44382462 - B1_Mm SINE Alu -1 146 1 2 1035 1134 226 107 114 chr15 59112512 59112692 -44382282 - MTD LTR MaLR -209 210 24 2 1036 973 180 34 69 chr15 59113954 59114187 -44380787 - URR1B DNA MER1_type 0 225 1 2 1036 924 241 86 26 chr15 59114322 59114590 -44380384 + B4A SINE B4 1 284 -8 2 1036 399 326 0 11 chr15 59114600 59114777 -44380197 + (CA)n Simple_repeat Simple_repeat 1 175 0 2 1036 421 366 128 23 chr15 59114995 59115510 -44379464 + L1M4b LINE L1 341 909 -6425 2 1036 937 79 0 8 chr15 59115741 59115869 -44379105 + B1_Mus1 SINE Alu 1 127 -21 2 1036 432 228 50 42 chr15 59116329 59116448 -44378526 + MT2B LTR ERVL 159 278 -323 2 1036 699 167 68 0 chr15 59116342 59116474 -44378500 + B1_Mur3 SINE Alu 8 148 -1 2 1036 207 146 0 0 chr15 59116474 59116515 -44378459 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 2 1036 261 139 0 0 chr15 59116534 59116577 -44378397 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 2 1036 241 317 54 63 chr15 59117081 59117192 -44377782 - MER20 DNA MER1_type -30 189 80 2 1036 630 26 0 0 chr15 59117220 59117296 -44377678 + (GA)n Simple_repeat Simple_repeat 1 76 0 2 1036 225 343 0 0 chr15 59117379 59117446 -44377528 + ID4_ SINE ID 3 69 -14 2 1036 1940 194 18 20 chr15 59117937 59118337 -44376637 + MTB_Mm LTR MaLR 1 399 -8 2 1036 891 252 53 5 chr15 59118644 59118851 -44376123 + B4A SINE B4 1 217 -75 2 1036 1548 229 52 3 chr15 59118879 59119225 -44375749 + ORR1D2 LTR MaLR 1 363 -7 2 1036 222 351 39 13 chr15 59120070 59120148 -44374826 + ID_B1 SINE B4 26 105 -119 2 1036 316 294 15 45 chr15 59120183 59120315 -44374659 + B4A SINE B4 2 129 -163 2 1036 2826 50 40 38 chr15 59120315 59120639 -44374335 - MTB LTR MaLR 0 400 72 2 1036 5331 81 89 56 chr15 59120639 59121512 -44373462 - RMER17A2 LTR ERVK -4 902 1 2 1036 2826 50 40 38 chr15 59121512 59121584 -44373390 - MTB LTR MaLR -329 71 3 2 1036 224 222 0 18 chr15 59121718 59121773 -44373201 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1036 327 82 0 0 chr15 59122485 59122534 -44372440 - L1_Mus2 LINE L1 0 6566 6518 2 1036 207 299 0 54 chr15 59122891 59122983 -44371991 + CT-rich Low_complexity Low_complexity 1 87 0 2 1036 24 0 0 0 chr15 59123806 59123830 -44371144 + GC_rich Low_complexity Low_complexity 1 24 0 2 1036 527 78 13 0 chr15 59124150 59124227 -44370747 + (TTTC)n Simple_repeat Simple_repeat 3 80 0 2 1036 332 303 56 0 chr15 59124229 59124318 -44370656 - PB1D10 SINE Alu -7 110 17 2 1036 354 87 0 0 chr15 59124318 59124364 -44370610 + Lx2 LINE L1 6778 6823 -174 2 1036 4229 101 63 17 chr15 59124364 59125027 -44369947 + ORR1A2-int LTR MaLR 1270 1963 0 2 1036 2445 86 3 38 chr15 59125027 59125311 -44369663 + ORR1A2 LTR MaLR 1 285 -42 2 1036 1518 63 5 0 chr15 59125311 59125501 -44369473 + B2_Mm1a SINE B2 1 191 -2 2 1036 2445 86 3 38 chr15 59125501 59125555 -44369419 + ORR1A2 LTR MaLR 286 327 0 2 1036 380 147 43 14 chr15 59125555 59125624 -44369350 + Lx9 LINE L1 6697 6767 -877 2 1036 853 158 8 0 chr15 59125668 59125801 -44369173 + Lx9 LINE L1 6776 6909 -735 2 1036 4575 145 60 30 chr15 59125821 59126691 -44368283 - RLTR13D6 LTR ERVK -46 856 1 2 1036 1235 139 20 5 chr15 59126693 59126888 -44368086 + RLTR20B2 LTR ERVK 13 210 -350 2 1036 1115 84 0 0 chr15 59126890 59127033 -44367941 + B1_Mus1 SINE Alu 2 144 -4 2 1036 1065 64 43 0 chr15 59127119 59127260 -44367714 + B1_Mus2 SINE Alu 1 147 0 2 1036 954 263 51 9 chr15 59127350 59127565 -44367409 + ID_B1 SINE B4 1 224 0 2 1036 1433 206 143 3 chr15 59127625 59127961 -44367013 + ORR1C2 LTR MaLR 1 383 -1 2 1036 231 167 0 0 chr15 59128217 59128259 -44366715 + (TATG)n Simple_repeat Simple_repeat 3 44 0 2 1036 702 307 12 11 chr15 59128338 59128549 -44366425 + B3A SINE B2 1 214 -2 2 1036 1366 71 38 5 chr15 59128549 59128734 -44366240 + B2_Mm2 SINE B2 2 192 -3 2 1036 207 0 0 0 chr15 59128881 59128904 -44366070 + (AGCTG)n Simple_repeat Simple_repeat 1 23 0 2 1036 2807 135 0 12 chr15 59130480 59130906 -44364068 - MTC LTR MaLR 0 421 1 2 1036 3067 20 0 17 chr15 59131027 59131379 -44363595 - ORR1A0 LTR MaLR 0 346 1 2 1036 12871 46 51 59 chr15 59131379 59132918 -44362056 - ORR1A0-int LTR MaLR 0 1792 243 2 1036 1570 42 5 10 chr15 59132918 59133111 -44361863 + B2_Mm1t SINE B2 2 193 0 2 1036 12871 46 51 59 chr15 59133111 59133377 -44361597 - ORR1A0-int LTR MaLR -1550 242 2 2 1036 635 13 0 0 chr15 59133377 59133452 -44361522 - ORR1A0 LTR MaLR -271 75 1 2 1036 2238 138 14 8 chr15 59134028 59134393 -44360581 + ORR1B2 LTR MaLR 1 367 0 2 1036 505 313 11 84 chr15 59134960 59135138 -44359836 + RSINE1 SINE B4 1 165 0 2 1036 758 213 60 20 chr15 59135194 59135395 -44359579 + B3 SINE B2 5 213 -3 2 1036 515 305 14 54 chr15 59135414 59135636 -44359338 + Lx8 LINE L1 7062 7274 -199 2 1036 381 70 0 0 chr15 59135712 59135769 -44359205 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 1036 397 364 29 29 chr15 59135787 59135957 -44359017 + MER58A DNA MER1_type 55 224 0 2 1036 1256 41 0 0 chr15 59136037 59136184 -44358790 + B1_Mus1 SINE Alu 2 148 0 2 1036 399 44 44 0 chr15 59136680 59136690 -44358284 + (TC)n Simple_repeat Simple_repeat 2 12 0 2 1036 919 91 22 22 chr15 59136690 59136869 -44358105 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 2 1036 399 44 44 0 chr15 59136869 59136926 -44358048 + (TC)n Simple_repeat Simple_repeat 1 59 0 2 1036 777 159 7 33 chr15 59136934 59137084 -44357890 - B1_Mus1 SINE Alu -2 146 1 2 1036 984 194 66 35 chr15 59137266 59137555 -44357419 + RMER17C LTR ERVK 1 298 -112 2 1036 318 244 0 0 chr15 59137555 59137637 -44357337 + CT-rich Low_complexity Low_complexity 2 83 0 2 1036 355 300 6 85 chr15 59137812 59137976 -44356998 - MLT1A LTR MaLR -6 368 218 2 1036 1740 21 0 0 chr15 59138742 59138934 -44356040 - B2_Mm1t SINE B2 0 193 2 2 1036 906 140 108 46 chr15 59139030 59139225 -44355749 - B3 SINE B2 -8 208 2 2 1036 248 263 51 31 chr15 59139499 59139597 -44355377 + MIRc SINE MIR 58 157 -111 2 1036 1238 48 0 0 chr15 59140076 59140222 -44354752 + B1_Mm SINE Alu 1 146 -1 2 1036 1401 57 23 0 chr15 59140228 59140405 -44354569 - B2_Mm2 SINE B2 -14 181 1 2 1036 184 246 101 0 chr15 59140468 59140537 -44354437 - L3 LINE CR1 -814 3675 3600 2 1036 947 101 195 0 chr15 59140754 59140913 -44354061 + B2_Mm1t SINE B2 2 191 -2 2 1036 910 189 102 0 chr15 59140970 59141166 -44353808 - B3 SINE B2 0 216 1 2 1036 1148 14 14 0 chr15 59141206 59141345 -44353629 + B1_Mm SINE Alu 6 146 -1 2 1036 189 0 0 0 chr15 59141490 59141511 -44353463 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1036 1256 41 0 0 chr15 59141513 59141659 -44353315 - B1_Mus1 SINE Alu -1 147 2 2 1036 306 0 0 0 chr15 59141676 59141710 -44353264 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1036 224 65 0 0 chr15 59141720 59141751 -44353223 - B3A SINE B2 -167 31 1 2 1036 1393 196 156 25 chr15 59141988 59142303 -44352671 + MTD LTR MaLR 6 361 -58 2 1036 24 0 0 0 chr15 59142461 59142485 -44352489 + AT_rich Low_complexity Low_complexity 1 24 0 2 1036 235 229 107 76 chr15 59143096 59143316 -44351658 + MMSAT4 Satellite Satellite 1 226 -15 2 1036 870 180 5 73 chr15 59143738 59143930 -44351044 + B2_Mm2 SINE B2 3 181 -14 2 1036 1519 53 27 0 chr15 59143930 59144118 -44350856 - B2_Mm1a SINE B2 0 193 1 2 1036 398 176 210 6 chr15 59144146 59144249 -44350725 + PB1D9 SINE Alu 1 119 -1 3 1036 290 197 26 0 chr15 59144250 59144326 -44350648 + (CATATA)n Simple_repeat Simple_repeat 5 82 0 3 1036 593 241 58 53 chr15 59145316 59145487 -44349487 + B2_Mm2 SINE B2 2 173 -22 3 1036 260 328 100 8 chr15 59145823 59145943 -44349031 + MIRb SINE MIR 126 256 -12 3 1036 705 162 52 37 chr15 59145991 59146126 -44348848 - B1_Mur1 SINE Alu -2 147 11 3 1036 263 259 103 43 chr15 59146026 59146143 -44348831 - B4A SINE B4 -86 206 83 3 1036 211 231 104 61 chr15 59148244 59148359 -44346615 - L2 LINE L2 -444 2975 2856 3 1036 197 302 43 65 chr15 59148586 59148678 -44346296 + MIRm SINE MIR 47 136 -140 3 1036 201 129 0 0 chr15 59149665 59149696 -44345278 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 3 1036 1161 75 0 0 chr15 59150182 59150329 -44344645 - B1_Mus2 SINE Alu 0 147 1 3 1036 1271 64 0 34 chr15 59150466 59150644 -44344330 - B2_Mm2 SINE B2 -18 177 6 3 1036 249 296 51 25 chr15 59150661 59150779 -44344195 + L1MA6 LINE L1 6180 6300 0 3 1036 1636 32 5 0 chr15 59152246 59152433 -44342541 - B2_Mm1a SINE B2 -4 189 2 3 1036 1528 59 0 5 chr15 59153163 59153351 -44341623 - B2_Mm2 SINE B2 -7 188 2 3 1036 652 259 14 7 chr15 59153353 59153493 -44341481 + B3A SINE B2 34 174 -24 3 1036 439 286 96 27 chr15 59154103 59154322 -44340652 - Lx8 LINE L1 -4 7469 7236 3 1036 1225 54 0 0 chr15 59156430 59156577 -44338397 + B1_Mm SINE Alu 1 147 0 3 1036 402 210 180 0 chr15 59156903 59157003 -44337971 - B1_Mur2 SINE Alu -5 144 27 3 1036 623 264 122 6 chr15 59157023 59157187 -44337787 - B3 SINE B2 -27 189 7 3 1036 418 254 129 1 chr15 59157193 59157328 -44337646 - ID_B1 SINE B4 -46 246 93 3 1036 1126 211 37 85 chr15 59158374 59158809 -44336165 - RMER17A LTR ERVK 0 751 338 3 1036 1758 59 0 0 chr15 59158792 59159013 -44335961 - RMER17A LTR ERVK -530 221 1 3 1036 390 255 55 36 chr15 59159394 59159504 -44335470 + PB1D10 SINE Alu 1 112 -5 3 1036 1624 224 135 6 chr15 59159814 59160281 -44334693 - RLTR11A2 LTR ERVK 0 527 1 3 1036 436 220 74 114 chr15 59160532 59160681 -44334293 + B4 SINE B4 81 223 -69 3 1036 893 116 0 15 chr15 59160552 59160683 -44334291 + B1_Mur4 SINE Alu 22 150 0 3 1036 931 109 80 0 chr15 59161119 59161256 -44333718 - B1_Mus1 SINE Alu 0 148 1 3 1036 379 320 49 8 chr15 59161498 59161621 -44333353 + RSINE1 SINE B4 13 140 -25 3 1036 231 262 71 12 chr15 59162910 59162995 -44331979 - B4A SINE B4 -18 274 185 3 1036 1176 55 0 20 chr15 59163146 59163295 -44331679 - B1_Mus2 SINE Alu 0 147 2 3 1036 237 65 0 0 chr15 59164260 59164291 -44330683 + (GGA)n Simple_repeat Simple_repeat 2 32 0 3 1036 208 53 53 0 chr15 59164374 59164412 -44330562 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 1036 441 17 0 17 chr15 59164990 59165049 -44329925 - B1_Mus2 SINE Alu 0 147 90 3 1036 449 263 36 60 chr15 59165423 59165589 -44329385 + RSINE1 SINE B4 2 163 -2 3 1036 362 294 35 7 chr15 59165826 59165970 -44329004 + B1F SINE Alu 1 148 -1 3 1036 207 146 42 0 chr15 59167748 59167796 -44327178 + A-rich Low_complexity Low_complexity 5 54 0 3 1036 1152 70 0 0 chr15 59167984 59168141 -44326833 + B2_Mm2 SINE B2 2 158 -37 3 1036 331 38 38 0 chr15 59168142 59168195 -44326779 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 3 1036 846 210 40 10 chr15 59169154 59169356 -44325618 + B3 SINE B2 1 208 -8 3 1036 1300 89 6 16 chr15 59169769 59169951 -44325023 - B2_Mm1t SINE B2 -9 184 5 3 1036 336 48 0 0 chr15 59170798 59170840 -44324134 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1036 565 228 34 0 chr15 59170844 59170993 -44323981 - B3A SINE B2 -44 154 1 3 1036 890 302 24 75 chr15 59173140 59173473 -44321501 + MTEa LTR MaLR 58 373 -6 3 1036 205 385 56 7 chr15 59175335 59175479 -44319495 + MIR SINE MIR 112 262 0 3 1036 666 254 42 0 chr15 59175891 59176080 -44318894 + ID_B1 SINE B4 2 198 -26 3 1036 504 0 0 0 chr15 59176452 59176508 -44318466 + (GGGA)n Simple_repeat Simple_repeat 3 58 0 3 1036 1192 55 0 7 chr15 59178666 59178814 -44316160 - B1_Mus2 SINE Alu 0 147 1 3 1036 749 141 23 8 chr15 59180268 59180397 -44314577 + B1_Mur2 SINE Alu 15 145 -4 3 1036 197 276 102 0 chr15 59181161 59181259 -44313715 + MER5A DNA MER1_type 14 121 -68 3 1036 806 207 94 8 chr15 59181325 59181559 -44313415 - RCHARR1 DNA MER1_type -14 960 707 3 1036 1319 79 51 0 chr15 59182194 59182371 -44312603 + B2_Mm2 SINE B2 2 187 -8 3 1036 22 0 0 0 chr15 59182771 59182793 -44312181 + AT_rich Low_complexity Low_complexity 1 22 0 3 1036 553 216 56 45 chr15 59182817 59182996 -44311978 - B3A SINE B2 -16 182 2 3 1036 1045 239 131 0 chr15 59183653 59183983 -44310991 + MTEa LTR MaLR 3 372 -7 3 1036 289 238 50 0 chr15 59184293 59184373 -44310601 + B4A SINE B4 3 86 -206 3 1036 246 32 0 0 chr15 59184376 59184407 -44310567 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1036 1725 202 51 32 chr15 59185825 59186253 -44308721 + RLTR11A LTR ERVK 55 526 -2 3 1036 637 297 55 55 chr15 59186470 59186728 -44308246 - B4A SINE B4 0 292 37 3 1036 2123 131 164 0 chr15 59186728 59187087 -44307887 + MTC LTR MaLR 1 418 -3 3 1036 637 297 55 55 chr15 59187087 59187120 -44307854 - B4A SINE B4 -256 36 1 3 1036 1797 145 29 20 chr15 59187974 59188319 -44306655 + ORR1B1 LTR MaLR 41 388 -6 3 1036 1004 268 81 6 chr15 59188316 59188650 -44306324 + MER68 LTR ERVL 83 441 -122 3 1036 287 222 178 8 chr15 59188979 59189097 -44305877 + B1F SINE Alu 5 142 -7 3 1036 473 228 23 39 chr15 59189642 59189770 -44305204 - ID_B1 SINE B4 -1 223 98 3 1036 392 250 136 8 chr15 59190029 59190154 -44304820 + B1_Mur2 SINE Alu 9 149 0 3 1036 202 200 0 0 chr15 59191087 59191122 -44303852 + CT-rich Low_complexity Low_complexity 2 36 0 3 1036 717 147 90 56 chr15 59191199 59191343 -44303631 - B1_Mur2 SINE Alu 0 149 1 3 1036 234 0 0 0 chr15 59191489 59191515 -44303459 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 3 1036 874 120 68 0 chr15 59191517 59191650 -44303324 - B1_Mur2 SINE Alu -7 142 1 3 1036 370 204 31 41 chr15 59191769 59191866 -44303108 - PB1D7 SINE Alu 0 120 25 3 1036 274 304 105 26 chr15 59193151 59193303 -44301671 + RSINE1 SINE B4 2 165 0 3 1036 379 137 39 24 chr15 59193305 59193432 -44301542 + (CA)n Simple_repeat Simple_repeat 1 129 0 3 1036 736 241 118 0 chr15 59193509 59193696 -44301278 - B3 SINE B2 -7 209 1 3 1036 1102 83 7 0 chr15 59193914 59194059 -44300915 - B1_Mus1 SINE Alu 0 148 3 3 1036 1079 129 0 6 chr15 59194122 59194301 -44300673 + (GGA)n Simple_repeat Simple_repeat 3 180 0 3 1036 582 127 0 48 chr15 59194302 59194426 -44300548 + GA-rich Low_complexity Low_complexity 2 119 0 3 1036 1185 115 66 0 chr15 59195329 59195511 -44299463 - B2_Mm2 SINE B2 -1 194 1 3 1036 979 181 14 42 chr15 59195956 59196169 -44298805 - URR1B DNA MER1_type 0 225 19 3 1036 239 418 33 0 chr15 59196595 59196777 -44298197 + MIRb SINE MIR 23 210 -58 3 1036 205 325 43 93 chr15 59197347 59197486 -44297488 + L2b LINE L2 3242 3373 -2 3 1036 278 346 92 8 chr15 59198057 59198296 -44296678 - MER46C DNA MER2_type -1 337 79 3 1036 273 260 94 19 chr15 59199264 59199370 -44295604 - ID_B1 SINE B4 -32 192 79 3 1036 195 42 0 0 chr15 59199413 59199437 -44295537 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1036 823 145 8 22 chr15 59199594 59199728 -44295246 - B1_Mur2 SINE Alu -15 134 3 3 1036 1166 68 0 0 chr15 59199743 59199891 -44295083 - B1_Mus1 SINE Alu 0 148 1 3 1036 338 259 62 9 chr15 59200341 59200454 -44294520 + PB1D9 SINE Alu 2 120 0 3 1036 795 59 246 0 chr15 59200951 59201069 -44293905 - B1_Mus1 SINE Alu 0 148 2 3 1036 417 236 189 18 chr15 59201805 59201942 -44293032 + B3A SINE B2 2 168 -30 3 1036 405 58 0 0 chr15 59201942 59201994 -44292980 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 1036 417 236 189 18 chr15 59201994 59202020 -44292954 + B3A SINE B2 169 193 -5 3 1036 1045 160 32 27 chr15 59202303 59202489 -44292485 - B2_Mm2 SINE B2 -6 189 3 3 1036 1859 117 139 42 chr15 59202692 59203023 -44291951 - ORR1B2 LTR MaLR -4 363 1 3 1036 1261 187 141 30 chr15 59203723 59204021 -44290953 + RMER1B Other Other 733 1063 -3 3 1036 236 315 65 0 chr15 59204097 59204189 -44290785 - L2a LINE L2 -42 3384 3287 3 1036 207 0 0 0 chr15 59204360 59204383 -44290591 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1036 753 186 243 6 chr15 59204626 59204799 -44290175 - B3 SINE B2 -1 215 2 3 1036 587 125 108 0 chr15 59204826 59204946 -44290028 - URR1B DNA MER1_type -10 215 83 3 1036 195 69 0 0 chr15 59205256 59205285 -44289689 + (C)n Simple_repeat Simple_repeat 1 29 0 3 1036 23 0 0 0 chr15 59205744 59205767 -44289207 + GC_rich Low_complexity Low_complexity 1 23 0 3 1036 293 269 125 69 chr15 59206852 59206996 -44287978 - MER20 DNA MER1_type -38 181 30 3 1036 862 290 66 23 chr15 59207043 59207392 -44287582 - MLT1A0 LTR MaLR -1 364 1 3 1036 3234 39 21 0 chr15 59207549 59207937 -44287037 - MTA_Mm LTR MaLR 0 396 1 3 1036 227 297 173 33 chr15 59207959 59208415 -44286559 - L2 LINE L2 -1412 2007 1488 3 1036 1191 55 0 14 chr15 59208432 59208580 -44286394 - B1_Mus2 SINE Alu 0 147 2 4 1036 367 248 79 0 chr15 59208684 59208785 -44286189 + PB1D7 SINE Alu 11 119 -1 4 1036 185 308 0 0 chr15 59209011 59209063 -44285911 + L2a LINE L2 3356 3407 -19 4 1036 21 57 0 0 chr15 59210080 59210115 -44284859 + AT_rich Low_complexity Low_complexity 1 35 0 4 1036 273 225 0 0 chr15 59211407 59211527 -44283447 + GA-rich Low_complexity Low_complexity 1 120 0 4 1036 492 182 0 0 chr15 59211594 59211726 -44283248 + (TG)n Simple_repeat Simple_repeat 1 132 0 4 1036 312 300 90 35 chr15 59211743 59211888 -44283086 - RSINE1 SINE B4 -12 153 1 4 1036 1182 242 131 11 chr15 59212034 59212393 -44282581 + MTD LTR MaLR 4 405 -14 4 1036 1196 202 238 93 chr15 59212491 59212551 -44282423 + MT2A LTR ERVL 4 53 -480 4 1036 1399 75 32 0 chr15 59212551 59212738 -44282236 + B2_Mm2 SINE B2 1 193 -2 4 1036 1196 202 238 93 chr15 59212738 59213140 -44281834 + MT2A LTR ERVL 54 533 0 4 1036 1220 42 7 0 chr15 59213856 59214000 -44280974 + B1_Mm SINE Alu 3 147 0 4 1036 225 0 0 0 chr15 59214003 59214028 -44280946 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1036 674 201 22 0 chr15 59214066 59214200 -44280774 - B1_Mur4 SINE Alu -5 145 9 4 1036 334 299 34 20 chr15 59214269 59214416 -44280558 - B1F2 SINE Alu 0 149 1 4 1036 349 229 88 56 chr15 59214480 59214605 -44280369 - MER58A DNA MER1_type -2 222 94 4 1036 1203 210 121 18 chr15 59214607 59214946 -44280028 + ORR1D1 LTR MaLR 1 374 0 4 1036 313 235 100 20 chr15 59214946 59215026 -44279948 - MER58A DNA MER1_type -135 89 2 4 1036 779 262 39 5 chr15 59215070 59215273 -44279701 + B3 SINE B2 1 210 -6 4 1036 203 339 67 42 chr15 59215493 59215613 -44279361 - L2b LINE L2 -17 3358 3236 4 1036 572 327 56 58 chr15 59215678 59216258 -44278716 - Charlie1a DNA MER1_type -792 663 59 4 1036 287 308 58 34 chr15 59216480 59216685 -44278289 + ORSL-2b DNA Tip100 209 418 -90 4 1036 185 405 19 19 chr15 59217219 59217375 -44277599 - MIRb SINE MIR -58 210 55 4 1036 713 190 29 21 chr15 59217410 59217550 -44277424 + B1_Mur2 SINE Alu 9 149 0 4 1036 261 0 0 0 chr15 59217841 59217870 -44277104 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1036 288 0 0 0 chr15 59218215 59218247 -44276727 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1036 193 299 125 25 chr15 59218998 59219118 -44275856 - MIRb SINE MIR -97 171 40 4 1036 346 118 476 0 chr15 59220105 59220222 -44274752 - B2_Mm2 SINE B2 -37 179 2 4 1036 534 187 18 53 chr15 59220498 59220611 -44274363 - B1_Mus1 SINE Alu -30 118 10 4 1036 315 302 68 54 chr15 59220611 59220637 -44274337 - B4 SINE B4 -78 184 66 4 1036 490 242 119 19 chr15 59220762 59220922 -44274052 - MER5A DNA MER1_type -7 182 7 4 1036 339 85 0 0 chr15 59221056 59221103 -44273871 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 4 1036 1055 51 43 7 chr15 59221103 59221241 -44273733 - B1_Mm SINE Alu -3 144 2 4 1036 1226 54 0 0 chr15 59221994 59222141 -44272833 - B1_Mm SINE Alu 0 147 1 4 1036 213 94 18 54 chr15 59222233 59222289 -44272685 + T-rich Low_complexity Low_complexity 2 55 0 4 1036 215 241 0 0 chr15 59222342 59222396 -44272578 + A-rich Low_complexity Low_complexity 1 54 0 4 1036 285 325 72 62 chr15 59222735 59222869 -44272105 - MER33 DNA MER1_type -2 322 180 4 1036 435 256 237 29 chr15 59222869 59223042 -44271932 + B3 SINE B2 1 209 -7 4 1036 285 325 72 62 chr15 59223042 59223199 -44271775 - MER33 DNA MER1_type -145 179 29 4 1036 485 241 0 25 chr15 59224040 59224159 -44270815 - PB1D10 SINE Alu -1 116 1 4 1036 192 182 0 0 chr15 59224818 59224862 -44270112 + (CAGTA)n Simple_repeat Simple_repeat 2 45 0 4 1036 508 291 26 58 chr15 59225187 59225377 -44269597 - B3A SINE B2 -14 184 1 4 1036 505 221 82 0 chr15 59226079 59226201 -44268773 + RSINE1 SINE B4 3 134 -31 4 1036 182 328 16 0 chr15 59226572 59226636 -44268338 - MIR SINE MIR -68 140 76 4 1036 22 0 0 0 chr15 59226763 59226785 -44268189 + AT_rich Low_complexity Low_complexity 1 22 0 4 1036 1884 152 53 8 chr15 59226870 59227229 -44267745 - ORR1B1 LTR MaLR 0 394 20 4 1036 3554 77 6 2 chr15 59227241 59227710 -44267264 - L1_Mus3 LINE L1 -5 6633 6163 4 1036 3221 103 73 2 chr15 59227713 59228191 -44266783 - L1_Mm LINE L1 -183 5700 5189 4 1036 289 265 0 57 chr15 59228305 59228393 -44266581 - L1MB8 LINE L1 -42 6136 6054 4 1036 430 278 0 0 chr15 59228404 59228494 -44266480 + PB1D10 SINE Alu 2 91 -26 4 1036 200 167 0 77 chr15 59228498 59228550 -44266424 + GA-rich Low_complexity Low_complexity 2 49 0 4 1036 667 188 64 124 chr15 59228586 59228853 -44266121 - L1MB8 LINE L1 -193 5985 5735 4 1036 1138 204 72 24 chr15 59228881 59229172 -44265802 + ORR1D2 LTR MaLR 5 309 -61 4 1036 253 225 207 0 chr15 59229246 59229357 -44265617 - L1P5 LINE L1 -709 5447 5314 4 1036 463 226 45 0 chr15 59229367 59229500 -44265474 - L1MB8 LINE L1 -867 5279 5141 4 1036 275 360 121 25 chr15 59229775 59230014 -44264960 - LTR40a LTR ERVL -8 511 250 4 1036 299 310 17 33 chr15 59230027 59230147 -44264827 - LTR40a LTR ERVL -377 142 25 4 1036 377 259 52 26 chr15 59230872 59230987 -44263987 - PB1 SINE Alu -3 124 7 4 1036 500 270 215 30 chr15 59231202 59231385 -44263589 - L1MD3 LINE L1 -12 7983 7783 4 1036 1412 65 48 0 chr15 59231385 59231571 -44263403 - B2_Mm2 SINE B2 0 195 1 4 1036 500 270 215 30 chr15 59231571 59231857 -44263117 - L1MD3 LINE L1 -213 7782 7428 4 1036 2331 224 30 91 chr15 59231912 59232507 -44262467 + Lx6 LINE L1 6892 7450 -10 4 1036 480 276 151 31 chr15 59232546 59233033 -44261941 - L1MD3 LINE L1 -1066 6816 6219 4 1036 260 229 143 0 chr15 59233058 59233128 -44261846 - ID4 SINE ID -3 80 1 4 1036 1168 206 205 123 chr15 59233234 59233676 -44261298 + MT2A LTR ERVL 1 459 -74 4 1036 448 45 30 0 chr15 59233676 59233743 -44261231 + (CA)n Simple_repeat Simple_repeat 1 69 0 4 1036 1168 206 205 123 chr15 59233743 59233787 -44261187 + MT2A LTR ERVL 460 526 -7 4 1036 8620 134 12 20 chr15 59234247 59235909 -44259065 - Lx2B LINE L1 -2 6998 5356 4 1036 302 91 354 35 chr15 59236216 59236329 -44258645 - B2_Mm2 SINE B2 0 195 47 4 1036 1152 84 77 6 chr15 59236359 59236527 -44258447 - B2_Mm1t SINE B2 -12 181 2 4 1036 25 51 0 0 chr15 59236527 59236566 -44258408 + AT_rich Low_complexity Low_complexity 1 39 0 4 1036 1349 83 28 0 chr15 59236569 59236749 -44258225 - B2_Mm2 SINE B2 -6 189 5 4 1036 1188 62 7 0 chr15 59236932 59237078 -44257896 - B1_Mus2 SINE Alu 0 147 1 4 1036 203 322 25 0 chr15 59237078 59237170 -44257804 - MIR SINE MIR -119 157 65 4 1036 41 82 0 0 chr15 59237979 59238076 -44256898 + AT_rich Low_complexity Low_complexity 1 97 0 4 1036 368 267 207 28 chr15 59238496 59238820 -44256154 - L1MD LINE L1 -749 5397 5016 4 1036 272 280 121 18 chr15 59238919 59239130 -44255844 - L1MC LINE L1 -1192 4954 4722 4 1036 350 51 0 17 chr15 59239622 59239682 -44255292 + RMER17A2 LTR ERVK 450 508 -398 4 1036 603 0 0 0 chr15 59239682 59239749 -44255225 + (GA)n Simple_repeat Simple_repeat 2 68 0 4 1036 210 333 35 0 chr15 59241822 59241909 -44253065 + MIRc SINE MIR 52 141 -127 4 1036 876 246 10 5 chr15 59242552 59242760 -44252214 - B3 SINE B2 -5 211 3 4 1037 399 267 29 10 chr15 59246372 59246474 -44248500 + B1F1 SINE Alu 12 115 -34 4 1037 496 210 0 0 chr15 59246483 59246564 -44248410 + ID4_ SINE ID 1 81 -2 4 1037 180 0 0 0 chr15 59246835 59246855 -44248119 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1037 423 0 0 0 chr15 59247238 59247285 -44247689 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1037 1027 89 7 14 chr15 59248646 59248782 -44246192 + B1_Mus1 SINE Alu 2 137 -11 4 1037 239 0 0 31 chr15 59248782 59248814 -44246160 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 4 1037 1027 89 7 14 chr15 59248814 59248825 -44246149 + B1_Mus1 SINE Alu 138 148 0 4 1037 21 0 0 0 chr15 59250433 59250454 -44244520 + AT_rich Low_complexity Low_complexity 1 21 0 4 1037 1383 76 11 0 chr15 59250692 59250877 -44244097 - B2_Mm1a SINE B2 -3 190 4 4 1037 1034 77 27 20 chr15 59250943 59251089 -44243885 - B1_Mus1 SINE Alu 0 148 2 4 1037 638 210 0 32 chr15 59251210 59251333 -44243641 - ID_B1 SINE B4 -105 119 1 4 1037 5470 147 45 17 chr15 59251396 59252360 -44242614 - Lx4B LINE L1 -8 7050 6060 4 1037 797 173 0 62 chr15 59252383 59252543 -44242431 - B1_Mur4 SINE Alu 0 150 1 4 1037 350 210 308 78 chr15 59252550 59252717 -44242257 - B3 SINE B2 -4 212 7 4 1037 11942 22 0 1 chr15 59252973 59255033 -44239941 - L1Md_T LINE L1 0 6582 4524 4 1037 456 256 49 49 chr15 59255302 59255425 -44239549 - RSINE1 SINE B4 -40 125 3 4 1037 656 199 7 30 chr15 59256271 59256406 -44238568 - B1_Mur2 SINE Alu -16 133 2 4 1037 639 289 19 0 chr15 59257565 59257724 -44237250 - B3 SINE B2 -13 203 42 4 1037 2530 173 33 12 chr15 59257709 59258194 -44236780 + RLTR17 LTR ERVK 198 692 0 4 1037 252 280 85 31 chr15 59258747 59258876 -44236098 + MTEa LTR MaLR 244 379 0 4 1037 638 303 15 39 chr15 59259095 59259301 -44235673 + RMER30 DNA MER1_type 2 202 0 4 1037 256 282 111 16 chr15 59261539 59261665 -44233309 + MIRc SINE MIR 86 223 -45 4 1037 282 296 101 9 chr15 59262324 59262489 -44232485 + MIRc SINE MIR 10 188 -80 4 1037 279 188 62 0 chr15 59267371 59267435 -44227539 - ID4_ SINE ID -9 74 7 4 1037 1193 73 85 0 chr15 59267839 59268004 -44226970 + B2_Mm1t SINE B2 2 180 -13 4 1037 322 122 8 34 chr15 59268072 59268138 -44226836 + B2_Mm2 SINE B2 47 114 -102 4 1037 22 0 0 0 chr15 59268147 59268169 -44226805 + AT_rich Low_complexity Low_complexity 1 22 0 4 1037 303 221 0 1 chr15 59268351 59268430 -44226544 - B1_Mur2 SINE Alu -56 94 16 4 1037 244 192 13 27 chr15 59269971 59270046 -44224928 + (TTTG)n Simple_repeat Simple_repeat 2 75 0 4 1037 346 252 19 37 chr15 59270049 59270156 -44224818 - PB1D10 SINE Alu 0 117 13 5 1037 1872 181 118 11 chr15 59270403 59270783 -44224191 + MTC LTR MaLR 1 421 0 5 1037 1238 212 107 48 chr15 59270892 59271228 -44223746 - ORR1E LTR MaLR -3 356 1 5 1037 473 273 129 53 chr15 59271832 59272095 -44222879 - MLT1A0 LTR MaLR 0 365 83 5 1037 690 163 7 79 chr15 59272611 59272751 -44222223 - B3 SINE B2 -86 130 1 5 1037 3624 150 77 14 chr15 59272901 59273552 -44221422 - RLTR17 LTR ERVK 0 692 1 5 1037 212 299 174 7 chr15 59274471 59274626 -44220348 + L2b LINE L2 2660 2840 -579 5 1037 3686 182 82 4 chr15 59275185 59276005 -44218969 - ORR1B2-int LTR MaLR -623 886 3 5 1037 1573 140 219 7 chr15 59276005 59276306 -44218668 - ORR1B2 LTR MaLR -2 365 1 5 1037 519 17 0 0 chr15 59276594 59276654 -44218320 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1037 216 328 49 0 chr15 59276685 59276746 -44218228 + B1F SINE Alu 20 83 -66 5 1037 274 276 45 45 chr15 59277709 59277819 -44217155 + MIRc SINE MIR 44 153 -115 5 1037 286 336 35 56 chr15 59278066 59278208 -44216766 + L2b LINE L2 3237 3375 0 5 1037 1467 84 17 0 chr15 59278989 59279167 -44215807 - B2_Mm2 SINE B2 -14 181 1 5 1037 692 275 12 18 chr15 59280123 59280286 -44214688 + RSINE1 SINE B4 4 165 0 5 1037 297 338 192 13 chr15 59280462 59280780 -44214194 + L2 LINE L2 1984 2358 -1061 5 1037 213 309 113 36 chr15 59280856 59281024 -44213950 - MIRb SINE MIR 0 268 88 5 1037 244 296 14 0 chr15 59281153 59281224 -44213750 + ID4 SINE ID 2 73 -10 5 1037 310 283 74 68 chr15 59281287 59281435 -44213539 - B1F SINE Alu 0 149 1 5 1037 378 0 0 0 chr15 59281443 59281485 -44213489 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1037 588 200 30 0 chr15 59281719 59281819 -44213155 + B1_Mur4 SINE Alu 1 103 -47 5 1037 513 250 23 8 chr15 59282655 59282788 -44212186 + B1F SINE Alu 13 147 -2 5 1037 303 221 60 72 chr15 59282797 59282880 -44212094 + ID4_ SINE ID 2 83 0 5 1037 245 218 13 0 chr15 59282939 59283017 -44211957 + (TA)n Simple_repeat Simple_repeat 1 79 0 5 1037 252 186 100 0 chr15 59283025 59283095 -44211879 + (TGGA)n Simple_repeat Simple_repeat 2 78 0 5 1037 273 57 0 0 chr15 59283217 59283252 -44211722 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1037 438 246 45 23 chr15 59283271 59283404 -44211570 - B1F SINE Alu -1 148 13 5 1037 382 320 43 107 chr15 59283275 59283509 -44211465 - ID_B1 SINE B4 -4 220 2 5 1037 951 219 0 53 chr15 59283662 59283869 -44211105 + B3A SINE B2 1 196 -2 5 1037 379 277 82 34 chr15 59283948 59284094 -44210880 + MLT1B LTR MaLR 95 247 -143 5 1037 360 349 28 47 chr15 59284194 59284379 -44210595 + MLT1B LTR MaLR 200 467 0 5 1037 552 260 25 106 chr15 59284613 59284811 -44210163 + B3A SINE B2 35 216 0 5 1037 226 250 150 0 chr15 59284936 59284996 -44209978 + ID4_ SINE ID 1 69 -14 5 1037 248 258 66 22 chr15 59285229 59285320 -44209654 + RMER21A LTR ERV1 93 187 -655 5 1037 260 257 26 95 chr15 59285323 59285361 -44209613 + RMER21A LTR ERV1 409 444 -503 5 1037 189 74 0 0 chr15 59285361 59285388 -44209586 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1037 260 257 26 95 chr15 59285388 59285465 -44209509 + RMER21A LTR ERV1 445 516 -431 5 1037 204 40 0 0 chr15 59285501 59285526 -44209448 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 5 1037 228 111 0 0 chr15 59286178 59286214 -44208760 + (CTG)n Simple_repeat Simple_repeat 3 38 0 5 1037 477 141 0 0 chr15 59287584 59287683 -44207291 + (CA)n Simple_repeat Simple_repeat 2 100 0 5 1037 182 37 0 36 chr15 59287784 59287812 -44207162 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1037 224 123 0 50 chr15 59287995 59288055 -44206919 + T-rich Low_complexity Low_complexity 1 57 0 5 1037 1002 79 57 7 chr15 59288055 59288195 -44206779 - B1_Mus2 SINE Alu 0 147 1 5 1037 779 200 41 35 chr15 59289425 59289570 -44205404 + B1F1 SINE Alu 4 149 0 5 1037 707 278 87 26 chr15 59289797 59290144 -44204830 - Charlie1a DNA MER1_type 0 1455 1088 5 1037 480 312 78 5 chr15 59290305 59290498 -44204476 + MER58B DNA MER1_type 134 340 -1 5 1037 346 277 21 84 chr15 59291062 59291204 -44203770 - ORR1E LTR MaLR -20 359 227 5 1037 463 274 94 19 chr15 59291223 59291383 -44203591 - ORR1E LTR MaLR -185 174 3 5 1037 28764 65 16 32 chr15 59291580 59292770 -44202204 - Lx3_Mus LINE L1 0 7009 5842 5 1037 1173 97 7 0 chr15 59292770 59292914 -44202060 - B1_Mus2 SINE Alu -1 146 2 5 1037 28764 68 20 31 chr15 59292914 59296929 -44198045 - Lx3_Mus LINE L1 -42 5844 1847 5 1037 33 25 0 0 chr15 59298799 59298839 -44196135 + AT_rich Low_complexity Low_complexity 1 40 0 5 1037 597 204 35 55 chr15 59298979 59299124 -44195850 + B1F SINE Alu 3 144 -5 5 1037 209 108 27 0 chr15 59299124 59299161 -44195813 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 5 1037 1064 62 47 0 chr15 59299189 59299318 -44195656 + B1_Mus1 SINE Alu 2 136 -12 5 1037 732 43 0 0 chr15 59299318 59299410 -44195564 + (GAAAA)n Simple_repeat Simple_repeat 4 95 0 5 1037 271 278 14 2 chr15 59299623 59299706 -44195268 + MIRc SINE MIR 146 235 -33 5 1037 629 224 13 77 chr15 59300049 59300204 -44194770 + B1F1 SINE Alu 5 149 0 5 1037 360 138 0 0 chr15 59300425 59300490 -44194484 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1037 221 342 12 25 chr15 59300522 59300603 -44194371 - ID2 SINE ID -2 81 2 5 1037 204 67 0 0 chr15 59300914 59300944 -44194030 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1037 489 361 0 14 chr15 59301076 59301222 -44193752 + ID_B1 SINE B4 80 223 -1 5 1037 710 241 88 0 chr15 59302118 59302255 -44192719 + B3A SINE B2 2 150 -48 5 1037 378 0 0 0 chr15 59302260 59302302 -44192672 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1037 2326 190 42 60 chr15 59302514 59303063 -44191911 + RLTR20A LTR ERVK 3 541 0 5 1037 217 0 29 29 chr15 59303440 59303474 -44191500 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1037 306 73 0 0 chr15 59304306 59304347 -44190627 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1037 259 133 83 0 chr15 59304818 59304878 -44190096 + Lx9 LINE L1 7573 7637 -7 5 1037 332 281 31 10 chr15 59304964 59305061 -44189913 + B1F2 SINE Alu 9 107 -42 5 1037 981 46 0 0 chr15 59305917 59306048 -44188926 + (TG)n Simple_repeat Simple_repeat 2 132 0 5 1037 494 259 44 18 chr15 59306607 59306721 -44188253 - PB1D10 SINE Alu 0 117 1 5 1037 652 281 177 7 chr15 59308788 59309240 -44185734 - L1MB3 LINE L1 -31 6152 5624 5 1037 249 236 14 14 chr15 59310495 59310568 -44184406 + L1MB2 LINE L1 6027 6099 -72 5 1037 2997 152 18 114 chr15 59310683 59311299 -44183675 + RLTR31B_Mm LTR ERVK 1 557 0 5 1037 513 0 0 0 chr15 59314049 59314106 -44180868 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 1037 374 235 82 0 chr15 59314479 59314564 -44180410 - L1MA6 LINE L1 -70 6221 6130 5 1037 485 223 147 12 chr15 59314583 59314759 -44180215 - L1MA6 LINE L1 -283 6017 5830 5 1037 767 113 16 0 chr15 59314765 59314889 -44180085 + (TCTCCC)n Simple_repeat Simple_repeat 2 127 0 5 1037 423 0 0 0 chr15 59314889 59314936 -44180038 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1037 1043 235 132 37 chr15 59314973 59315353 -44179621 - L1MA6 LINE L1 -569 5731 5316 5 1037 943 234 14 63 chr15 59315408 59315631 -44179343 - B3 SINE B2 -3 213 2 5 1037 22 70 0 0 chr15 59315721 59315764 -44179210 + AT_rich Low_complexity Low_complexity 1 43 0 5 1037 404 239 109 34 chr15 59315875 59316107 -44178867 - L1MA6 LINE L1 -275 6022 5791 5 1037 319 288 14 0 chr15 59316115 59316188 -44178786 - ID4 SINE ID -9 74 1 5 1037 725 122 0 42 chr15 59316241 59316361 -44178613 - B1_Mur2 SINE Alu -13 136 22 5 1037 828 80 0 0 chr15 59318200 59318313 -44176661 + (CTTTG)n Simple_repeat Simple_repeat 2 114 0 5 1037 243 292 144 10 chr15 59318316 59318413 -44176561 - PB1 SINE Alu -5 122 13 5 1037 29 60 0 0 chr15 59319149 59319199 -44175775 + AT_rich Low_complexity Low_complexity 1 50 0 5 1037 214 388 88 35 chr15 59319349 59319576 -44175398 - L2b LINE L2 -96 3279 3041 5 1037 228 302 227 23 chr15 59319686 59319862 -44175112 - MIRb SINE MIR -32 236 25 5 1037 1168 284 119 55 chr15 59319914 59320569 -44174405 + L1_Mur3 LINE L1 4926 5622 -258 5 1037 242 242 136 0 chr15 59320633 59320699 -44174275 + ID4 SINE ID 1 75 -8 5 1037 231 173 0 37 chr15 59321348 59321402 -44173572 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1037 390 235 0 19 chr15 59321602 59321761 -44173213 + CT-rich Low_complexity Low_complexity 1 155 0 5 1037 1076 133 0 6 chr15 59321761 59321942 -44173032 + (TC)n Simple_repeat Simple_repeat 1 180 0 5 1037 234 0 0 0 chr15 59321942 59321968 -44173006 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 5 1037 315 256 93 0 chr15 59321970 59322056 -44172918 - B1F1 SINE Alu -47 102 9 5 1037 206 342 12 25 chr15 59323442 59323523 -44171451 + L2b LINE L2 3296 3375 0 5 1037 809 240 7 7 chr15 59324007 59324158 -44170816 + RSINE1 SINE B4 3 153 -12 5 1037 312 27 0 0 chr15 59324716 59324753 -44170221 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 5 1037 775 156 33 0 chr15 59325017 59325139 -44169835 - B1_Mur2 SINE Alu -20 129 4 5 1037 738 181 13 18 chr15 59326546 59326775 -44168199 + CT-rich Low_complexity Low_complexity 1 227 0 5 1037 423 0 0 0 chr15 59331165 59331212 -44163762 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1037 338 171 0 14 chr15 59332982 59333053 -44161921 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 5 1037 493 129 158 0 chr15 59333638 59333739 -44161235 + B3 SINE B2 2 118 -98 5 1037 222 37 0 0 chr15 59334511 59334538 -44160436 + (GGGGA)n Simple_repeat Simple_repeat 1 27 0 5 1037 1174 77 118 0 chr15 59335018 59335187 -44159787 - B2_Mm2 SINE B2 -6 189 1 5 1037 216 0 0 0 chr15 59335283 59335307 -44159667 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 5 1037 548 198 25 17 chr15 59335852 59335970 -44159004 + B3A SINE B2 11 129 -69 5 1037 258 0 71 0 chr15 59336448 59336490 -44158484 + (TTG)n Simple_repeat Simple_repeat 3 47 0 6 1037 221 227 58 43 chr15 59336491 59336560 -44158414 - B1_Mur3 SINE Alu -8 141 72 6 1037 198 191 0 0 chr15 59336802 59336844 -44158130 + CT-rich Low_complexity Low_complexity 2 43 0 6 1037 245 344 33 0 chr15 59337452 59337542 -44157432 + PB1D7 SINE Alu 24 116 -4 6 1037 441 0 0 0 chr15 59338086 59338135 -44156839 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 6 1037 947 97 0 0 chr15 59338170 59338304 -44156670 + B1_Mus2 SINE Alu 11 144 -3 6 1037 896 96 0 14 chr15 59338304 59338442 -44156532 + (GAAA)n Simple_repeat Simple_repeat 2 137 0 6 1037 455 306 64 12 chr15 59338687 59338859 -44156115 + MLT1G3 LTR MaLR 107 287 -308 6 1037 388 268 4 18 chr15 59339205 59339318 -44155656 + B1F SINE Alu 3 113 -36 6 1037 692 247 80 5 chr15 59340636 59340823 -44154151 + B3 SINE B2 2 202 -14 6 1037 187 262 121 15 chr15 59341357 59341423 -44153551 - MIRc SINE MIR -173 95 23 6 1037 380 194 28 0 chr15 59342722 59342794 -44152180 - ID4_ SINE ID -7 76 3 6 1037 220 269 19 0 chr15 59343230 59343282 -44151692 - L2a LINE L2 -40 3386 3334 6 1037 202 292 102 20 chr15 59343421 59343519 -44151455 + MIRc SINE MIR 124 229 -39 6 1037 250 224 52 0 chr15 59344195 59344253 -44150721 + B1F1 SINE Alu 1 61 -88 6 1037 260 183 10 146 chr15 59344256 59344352 -44150622 + MT2B LTR ERVL 154 236 -365 6 1037 560 184 0 17 chr15 59344275 59344391 -44150583 + PB1D9 SINE Alu 7 120 0 6 1037 45 0 0 0 chr15 59344394 59344439 -44150535 + AT_rich Low_complexity Low_complexity 1 45 0 6 1037 30 0 0 0 chr15 59344768 59344798 -44150176 + AT_rich Low_complexity Low_complexity 1 30 0 6 1037 346 183 109 79 chr15 59345268 59345369 -44149605 + MER96B DNA hAT 1 104 -313 6 1037 235 271 84 92 chr15 59345462 59345604 -44149370 - MER96B DNA hAT -269 148 8 6 1037 216 0 0 0 chr15 59346266 59346290 -44148684 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 6 1037 343 247 37 0 chr15 59346307 59346388 -44148586 - PB1D7 SINE Alu -10 110 27 6 1037 1034 66 88 0 chr15 59346469 59346605 -44148369 - B1_Mus1 SINE Alu 0 148 1 6 1037 1462 60 11 0 chr15 59346829 59347013 -44147961 + B2_Mm1a SINE B2 2 187 -6 6 1037 291 114 0 0 chr15 59348885 59348929 -44146045 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 6 1037 397 270 0 116 chr15 59349193 59349329 -44145645 + B4 SINE B4 152 271 -21 6 1037 375 23 0 0 chr15 59349329 59349373 -44145601 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1037 397 270 0 116 chr15 59349373 59349391 -44145583 + B4 SINE B4 272 288 -4 6 1037 194 336 63 36 chr15 59350261 59350372 -44144602 - MIRc SINE MIR -71 197 84 6 1037 3181 11 0 49 chr15 59350557 59350943 -44144031 - IAPLTR1_Mm LTR ERVK 0 367 1 6 1037 203 269 0 0 chr15 59351137 59351189 -44143785 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 6 1037 555 200 50 29 chr15 59352496 59352635 -44142339 + B3A SINE B2 1 142 -56 6 1037 483 212 44 9 chr15 59357150 59357264 -44137710 - PB1D7 SINE Alu 0 120 3 6 1037 778 196 0 7 chr15 59358528 59358667 -44136307 - MTEb LTR MaLR -241 138 1 6 1037 740 226 112 5 chr15 59360911 59361107 -44133867 + ID_B1 SINE B4 3 219 -5 6 1037 352 264 54 9 chr15 59361228 59361339 -44133635 - MLT1A1 LTR MaLR 0 408 293 6 1037 222 167 45 15 chr15 59361417 59361484 -44133490 + (TTTG)n Simple_repeat Simple_repeat 2 70 0 6 1037 268 272 0 80 chr15 59361487 59361575 -44133399 - ID4 SINE ID 0 83 3 6 1037 275 319 25 58 chr15 59361598 59361718 -44133256 - MLT1A1 LTR MaLR -266 142 27 6 1037 231 285 33 62 chr15 59362550 59362674 -44132300 - MIR SINE MIR -110 166 35 6 1037 300 312 10 0 chr15 59363307 59363403 -44131571 - PB1 SINE Alu -22 105 9 6 1037 912 128 131 24 chr15 59364923 59365091 -44129883 + B2_Mm2 SINE B2 1 186 -9 6 1037 2108 245 112 13 chr15 59368592 59369270 -44125704 - L1MB8 LINE L1 -36 6142 5398 6 1037 1268 41 0 0 chr15 59371259 59371405 -44123569 + B1_Mus1 SINE Alu 2 147 -1 6 1037 180 97 0 0 chr15 59371406 59371437 -44123537 + (CAAAAA)n Simple_repeat Simple_repeat 4 34 0 6 1037 330 26 0 0 chr15 59371450 59371489 -44123485 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1037 234 0 0 0 chr15 59371606 59371632 -44123342 + (TC)n Simple_repeat Simple_repeat 1 26 0 6 1037 342 288 163 19 chr15 59372150 59372359 -44122615 - MIR SINE MIR -21 241 3 6 1037 286 236 75 53 chr15 59372450 59372544 -44122430 + B3A SINE B2 28 123 -75 6 1037 211 234 0 0 chr15 59374568 59374615 -44120359 - MIR SINE MIR -27 235 189 6 1037 489 194 15 15 chr15 59374677 59374808 -44120166 + GA-rich Low_complexity Low_complexity 2 132 0 6 1037 252 0 0 0 chr15 59375052 59375080 -44119894 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1038 251 203 0 14 chr15 59375691 59375761 -44119213 + (TAA)n Simple_repeat Simple_repeat 1 69 0 6 1038 320 295 129 59 chr15 59376040 59376242 -44118732 - MamRep137 DNA TcMar? -102 342 127 6 1038 1653 26 0 20 chr15 59376383 59376579 -44118395 + B2_Mm1a SINE B2 2 193 0 6 1038 831 276 38 58 chr15 59376877 59377138 -44117836 + B4A SINE B4 29 284 -8 6 1038 403 217 0 0 chr15 59377274 59377343 -44117631 - RSINE1 SINE B4 -94 71 3 6 1038 239 367 8 8 chr15 59377526 59377647 -44117327 - MIRb SINE MIR -30 238 118 6 1038 599 228 24 0 chr15 59377725 59377848 -44117126 - B1F SINE Alu -22 127 2 6 1038 648 295 35 0 chr15 59378799 59378999 -44115975 + B3 SINE B2 1 207 -9 6 1038 589 200 104 0 chr15 59379025 59379160 -44115814 + B1_Mur4 SINE Alu 1 149 -1 6 1038 394 220 33 0 chr15 59379552 59379643 -44115331 + PB1D10 SINE Alu 7 100 -17 6 1038 450 0 0 0 chr15 59379648 59379698 -44115276 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 1038 369 178 0 0 chr15 59379698 59379816 -44115158 + (CA)n Simple_repeat Simple_repeat 2 119 0 6 1038 759 250 93 11 chr15 59379894 59380076 -44114898 + B3A SINE B2 1 197 -1 6 1038 189 333 0 16 chr15 59382200 59382261 -44112713 + MIRm SINE MIR 101 160 -116 6 1038 183 83 0 77 chr15 59382709 59382721 -44112253 + A-rich Low_complexity Low_complexity 5 16 0 6 1038 1177 62 0 0 chr15 59382721 59382865 -44112109 + B1_Mm SINE Alu 1 144 -3 6 1038 183 83 0 77 chr15 59382865 59382904 -44112070 + A-rich Low_complexity Low_complexity 17 51 0 6 1038 234 105 0 0 chr15 59383140 59383178 -44111796 + (CAG)n Simple_repeat Simple_repeat 1 38 0 6 1038 394 308 54 54 chr15 59383306 59383474 -44111500 + B4 SINE B4 4 171 -121 6 1038 589 207 39 13 chr15 59383610 59383756 -44111218 + B1_Mur2 SINE Alu 5 149 0 6 1038 414 275 46 62 chr15 59383923 59384117 -44110857 + B3A SINE B2 1 191 -7 6 1038 375 225 0 24 chr15 59385310 59385392 -44109582 - PB1D10 SINE Alu -15 102 23 6 1038 570 179 142 0 chr15 59386945 59387079 -44107895 - RCHARR1 DNA MER1_type -151 823 671 6 1038 1275 260 89 26 chr15 59387078 59387505 -44107469 - RCHARR1 DNA MER1_type -495 479 26 6 1038 438 355 8 0 chr15 59388832 59388953 -44106021 + ID_B1 SINE B4 82 203 -21 6 1038 444 204 39 10 chr15 59389637 59389741 -44105233 + PB1D10 SINE Alu 10 116 -1 6 1038 236 291 102 46 chr15 59389861 59389969 -44105005 + B4 SINE B4 161 274 -18 6 1038 24 0 0 0 chr15 59390199 59390223 -44104751 + AT_rich Low_complexity Low_complexity 1 24 0 6 1038 490 204 275 35 chr15 59390225 59390367 -44104607 + B3A SINE B2 1 176 -19 6 1038 720 164 8 0 chr15 59390454 59390576 -44104398 + B1_Mur4 SINE Alu 1 123 -27 6 1038 337 276 119 52 chr15 59390724 59390858 -44104116 + B1F2 SINE Alu 2 144 -5 6 1038 227 188 84 103 chr15 59390903 59390970 -44104004 + L1MEc LINE L1 2346 2411 -3989 6 1038 1126 64 7 0 chr15 59390970 59391110 -44103864 - B1_Mus2 SINE Alu -6 141 1 6 1038 227 188 84 103 chr15 59391110 59391149 -44103825 + L1MEc LINE L1 2412 2450 -3950 6 1038 264 228 23 92 chr15 59391315 59391402 -44103572 + RLTR25B LTR ERVK 432 512 -516 6 1038 540 139 12 0 chr15 59391326 59391412 -44103562 + B1_Mur3 SINE Alu 42 128 -21 6 1038 258 287 39 19 chr15 59391610 59391713 -44103261 + L1ME1 LINE L1 4854 4958 -1188 6 1038 491 286 54 72 chr15 59391713 59391879 -44103095 + RSINE1 SINE B4 3 165 0 6 1038 330 115 0 0 chr15 59391977 59392029 -44102945 + (CATA)n Simple_repeat Simple_repeat 2 53 0 6 1038 861 166 45 0 chr15 59392095 59392252 -44102722 + B2_Mm2 SINE B2 1 164 -31 6 1038 783 318 127 59 chr15 59392324 59393056 -44101918 + L1ME1 LINE L1 5320 6101 -78 6 1038 293 333 11 0 chr15 59393268 59393361 -44101613 + ID_B1 SINE B4 80 173 -51 6 1038 341 261 80 0 chr15 59393287 59393375 -44101599 + PB1D10 SINE Alu 18 112 -5 6 1038 180 0 0 0 chr15 59393426 59393446 -44101528 + (CA)n Simple_repeat Simple_repeat 2 21 0 6 1038 477 122 0 0 chr15 59393446 59393520 -44101454 + (TA)n Simple_repeat Simple_repeat 2 75 0 6 1038 214 288 60 15 chr15 59393637 59393704 -44101270 - ID SINE ID -151 73 4 6 1038 225 291 12 12 chr15 59393715 59393795 -44101179 + (TATATG)n Simple_repeat Simple_repeat 5 84 0 6 1038 339 235 61 12 chr15 59394059 59394141 -44100833 + B1F1 SINE Alu 18 103 -46 6 1038 198 103 0 0 chr15 59394142 59394171 -44100803 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 6 1038 698 210 43 0 chr15 59394425 59394563 -44100411 + B1_Mur4 SINE Alu 5 148 -2 6 1038 608 222 0 0 chr15 59394608 59394716 -44100258 + B1_Mus2 SINE Alu 2 109 -38 6 1038 200 170 40 60 chr15 59395343 59395393 -44099581 - MIR3 SINE MIR -11 197 149 6 1038 342 223 72 72 chr15 59395719 59395830 -44099144 + MIR SINE MIR 90 200 -62 7 1038 363 250 0 111 chr15 59395854 59395962 -44099012 + B1F2 SINE Alu 2 97 -52 7 1038 785 27 236 0 chr15 59397075 59397185 -44097789 - B1_Mus2 SINE Alu -11 136 1 7 1038 449 257 0 42 chr15 59398263 59398381 -44096593 - B1F1 SINE Alu -3 146 34 7 1038 228 202 103 186 chr15 59403850 59403947 -44091027 + MT2B2 LTR ERVL 149 237 -347 7 1038 435 299 152 55 chr15 59403877 59404022 -44090952 + ID_B1 SINE B4 82 244 -48 7 1038 393 22 0 0 chr15 59405163 59405209 -44089765 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 7 1038 258 242 30 15 chr15 59405552 59405619 -44089355 - L2c LINE L2 -51 3336 3269 7 1038 270 204 41 0 chr15 59406715 59406764 -44088210 - PB1 SINE Alu -4 123 73 7 1038 383 284 134 12 chr15 59406762 59406926 -44088048 - B3 SINE B2 -4 212 29 7 1038 286 143 0 0 chr15 59406935 59406977 -44087997 - B1F SINE Alu -90 59 18 7 1038 560 248 9 0 chr15 59406977 59407090 -44087884 - PB1D7 SINE Alu -6 114 1 7 1038 1141 75 7 13 chr15 59407105 59407254 -44087720 - B1_Mus1 SINE Alu 0 148 1 7 1038 548 46 0 0 chr15 59407293 59407358 -44087616 - L1_Mus1 LINE L1 -416 6151 6087 7 1038 3570 41 0 0 chr15 59407358 59407774 -44087200 + L1_Mus1 LINE L1 6149 6564 -3 7 1038 238 289 0 0 chr15 59407811 59407856 -44087118 + B3A SINE B2 1 45 -153 7 1038 8828 101 1 11 chr15 59407856 59409807 -44085167 - L1_Mus2 LINE L1 -3 6563 4671 7 1038 1193 68 0 0 chr15 59409807 59409954 -44085020 - B1_Mus1 SINE Alu 0 148 2 7 1038 8732 164 2 32 chr15 59409954 59410277 -44084697 - L1_Mus2 LINE L1 -1206 4680 4360 7 1038 538 240 48 0 chr15 59410277 59410402 -44084572 + B3 SINE B2 33 163 -53 7 1038 1613 21 27 0 chr15 59410618 59410805 -44084169 - B2_Mm1a SINE B2 0 193 2 7 1038 397 150 219 61 chr15 59410972 59410999 -44083975 + ORR1C2 LTR MaLR 253 277 -107 7 1038 198 0 0 0 chr15 59410999 59411021 -44083953 + (TGG)n Simple_repeat Simple_repeat 1 22 0 7 1038 397 150 219 61 chr15 59411021 59411107 -44083867 + ORR1C2 LTR MaLR 278 384 0 7 1038 24 67 0 0 chr15 59411526 59411571 -44083403 + AT_rich Low_complexity Low_complexity 1 45 0 7 1038 347 297 11 0 chr15 59411598 59411689 -44083285 - RSINE1 SINE B4 -29 136 45 7 1038 519 276 45 34 chr15 59411834 59412010 -44082964 + B3A SINE B2 4 181 -17 7 1038 398 258 149 8 chr15 59412444 59412565 -44082409 + B1F2 SINE Alu 10 147 -2 7 1038 270 197 33 0 chr15 59412589 59412650 -44082324 + tRNA-Ala-GCA tRNA tRNA 1 63 -12 7 1038 204 288 13 64 chr15 59412757 59412835 -44082139 - L2c LINE L2 -50 3337 3264 7 1038 382 256 129 24 chr15 59413300 59413424 -44081550 + B1F1 SINE Alu 1 137 -12 7 1038 305 247 9 110 chr15 59414234 59414343 -44080631 - YREP_Mm Unknown Unknown -1465 347 250 7 1038 435 181 28 0 chr15 59414276 59414348 -44080626 + ID_B1 SINE B4 82 155 -69 7 1038 455 337 83 0 chr15 59414548 59414717 -44080257 - MIR SINE MIR -69 193 11 7 1038 397 179 51 13 chr15 59415601 59415680 -44079294 + PB1D10 SINE Alu 23 104 -13 7 1038 339 205 62 23 chr15 59415879 59416009 -44078965 - Lx6 LINE L1 -10 7450 7316 7 1038 1281 34 0 0 chr15 59416011 59416157 -44078817 + B1_Mm SINE Alu 1 146 -1 7 1038 362 223 314 69 chr15 59416178 59416337 -44078637 - Lx6 LINE L1 -136 7324 7127 7 1038 870 19 0 0 chr15 59416632 59416736 -44078238 + (CA)n Simple_repeat Simple_repeat 2 105 0 7 1038 291 276 92 0 chr15 59417442 59417529 -44077445 - L2a LINE L2 -17 3409 3315 7 1038 187 340 142 33 chr15 59417635 59417819 -44077155 - L2a LINE L2 -207 3168 2966 7 1038 425 289 164 0 chr15 59418197 59418349 -44076625 + B3A SINE B2 4 180 -18 7 1038 261 0 0 0 chr15 59418350 59418379 -44076595 + (TAA)n Simple_repeat Simple_repeat 1 29 0 7 1038 584 290 99 17 chr15 59418408 59418580 -44076394 + ID_B1 SINE B4 32 217 -7 7 1038 1003 315 63 13 chr15 59418794 59419112 -44075862 - MER2 DNA MER2_type 0 345 12 7 1038 180 294 14 29 chr15 59419267 59419337 -44075637 + MIRb SINE MIR 133 201 -67 7 1038 491 282 91 57 chr15 59420353 59420684 -44074290 - ORSL-2b DNA Tip100 -13 495 154 7 1038 216 111 0 0 chr15 59421196 59421232 -44073742 + (CAGA)n Simple_repeat Simple_repeat 3 38 0 7 1038 206 204 41 0 chr15 59421383 59421432 -44073542 + GA-rich Low_complexity Low_complexity 1 51 0 7 1038 367 246 70 109 chr15 59422039 59422240 -44072734 + Charlie1a DNA MER1_type 1077 1269 -186 7 1038 864 169 7 45 chr15 59422241 59422396 -44072578 + B1_Mur3 SINE Alu 1 149 0 7 1038 824 158 16 30 chr15 59422417 59422598 -44072376 + B3 SINE B2 8 180 -15 7 1038 602 216 23 64 chr15 59422585 59422758 -44072216 + Charlie1a DNA MER1_type 1249 1414 -41 7 1038 273 57 0 0 chr15 59422856 59422891 -44072083 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1038 538 307 47 5 chr15 59424053 59424246 -44070728 + ID_B1 SINE B4 4 204 -20 7 1038 714 24 0 0 chr15 59424247 59424331 -44070643 + (TC)n Simple_repeat Simple_repeat 2 85 0 7 1038 203 88 0 29 chr15 59424343 59424378 -44070596 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1038 317 231 12 60 chr15 59425670 59425753 -44069221 - HAL1-3A_ME LINE L1 -804 2054 1976 7 1038 2372 188 59 26 chr15 59426059 59426241 -44068733 - RCHARR1 DNA MER1_type -36 938 757 7 1038 1049 137 0 90 chr15 59426241 59426442 -44068532 - B2_Mm1t SINE B2 -8 185 3 7 1038 2372 227 108 17 chr15 59426442 59426988 -44067986 - RCHARR1 DNA MER1_type -218 756 153 7 1038 513 260 150 23 chr15 59426984 59427157 -44067817 + B3 SINE B2 21 215 -1 7 1038 655 164 125 0 chr15 59427189 59427317 -44067657 - B1_Mur2 SINE Alu -1 148 5 7 1038 193 318 136 0 chr15 59427515 59427625 -44067349 + MIRb SINE MIR 127 251 -17 7 1038 698 242 55 98 chr15 59429025 59429281 -44065693 + B4 SINE B4 48 292 0 7 1038 180 0 0 0 chr15 59429926 59429946 -44065028 + (GGGTG)n Simple_repeat Simple_repeat 4 23 0 7 1038 400 167 312 0 chr15 59430283 59430379 -44064595 - B1F SINE Alu -5 144 19 7 1038 240 163 0 0 chr15 59430956 59430999 -44063975 + GA-rich Low_complexity Low_complexity 3 45 0 7 1038 254 352 97 18 chr15 59431190 59431355 -44063619 + L2b LINE L2 3166 3343 -32 7 1038 787 216 70 74 chr15 59432175 59432390 -44062584 + ID_B1 SINE B4 3 216 -8 7 1038 186 143 0 0 chr15 59432746 59432781 -44062193 + (TTG)n Simple_repeat Simple_repeat 2 36 0 7 1038 450 0 0 0 chr15 59433326 59433376 -44061598 + (TC)n Simple_repeat Simple_repeat 1 50 0 7 1038 1263 213 54 4 chr15 59433764 59434023 -44060951 - Lx9 LINE L1 -1067 6577 6306 7 1038 1517 237 114 15 chr15 59434034 59434506 -44060468 + Lx9 LINE L1 7123 7641 -3 7 1038 272 300 156 0 chr15 59434583 59434673 -44060301 + PB1D10 SINE Alu 1 104 -13 7 1038 1236 54 0 0 chr15 59434691 59434839 -44060135 - B1_Mus1 SINE Alu 0 148 1 7 1038 1234 68 0 0 chr15 59434934 59435082 -44059892 - B1_Mus1 SINE Alu 0 148 1 7 1038 280 255 179 18 chr15 59435161 59435273 -44059701 - MIR SINE MIR 0 262 133 7 1038 916 127 0 51 chr15 59435313 59435471 -44059503 + B1_Mur4 SINE Alu 1 150 0 7 1038 681 47 0 0 chr15 59436282 59436367 -44058607 + (TCC)n Simple_repeat Simple_repeat 2 86 0 7 1038 390 69 0 0 chr15 59436367 59436425 -44058549 + (TC)n Simple_repeat Simple_repeat 1 58 0 7 1038 246 224 0 0 chr15 59436425 59436475 -44058499 - B1_Mur1 SINE Alu -15 134 53 7 1038 356 259 43 26 chr15 59436630 59436745 -44058229 + PB1 SINE Alu 3 119 -8 7 1038 363 284 18 9 chr15 59436779 59436889 -44058085 + PB1D10 SINE Alu 6 116 -1 7 1038 245 312 73 0 chr15 59437379 59437475 -44057499 - MIR SINE MIR -76 186 84 7 1038 339 25 0 0 chr15 59437859 59437899 -44057075 + (TGG)n Simple_repeat Simple_repeat 2 41 0 7 1038 183 224 306 9 chr15 59438148 59438256 -44056718 - L2a LINE L2 -10 3416 3277 7 1038 274 283 0 0 chr15 59438260 59438320 -44056654 + ID4 SINE ID 13 72 -11 7 1038 574 280 42 28 chr15 59438366 59438583 -44056391 + ID_B1 SINE B4 2 221 -3 7 1038 222 37 0 0 chr15 59438638 59438665 -44056309 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1038 583 139 220 9 chr15 59438668 59438777 -44056197 - B1_Mus1 SINE Alu -14 134 3 7 1038 337 217 190 8 chr15 59439004 59439125 -44055849 - ID_B1 SINE B4 0 224 82 7 1038 334 278 169 17 chr15 59439639 59439811 -44055163 + Charlie4a DNA MER1_type 27 224 -284 7 1038 1195 107 72 11 chr15 59439834 59440014 -44054960 + B2_Mm1t SINE B2 1 191 -2 7 1038 232 185 37 0 chr15 59440041 59440095 -44054879 + tRNA-Ala-GCY_ tRNA tRNA 11 66 -9 7 1038 276 170 0 0 chr15 59440098 59440151 -44054823 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1038 1033 113 7 0 chr15 59440242 59440384 -44054590 - B1_Mus2 SINE Alu 0 147 5 7 1038 21 36 0 0 chr15 59441002 59441030 -44053944 + AT_rich Low_complexity Low_complexity 1 28 0 7 1038 292 223 73 77 chr15 59441178 59441251 -44053723 + L1MEc LINE L1 725 785 -5615 7 1038 774 251 28 50 chr15 59441251 59441469 -44053505 + ID_B1 SINE B4 1 213 -11 7 1038 292 223 73 77 chr15 59441469 59441628 -44053346 + L1MEc LINE L1 786 956 -5444 7 1038 1092 240 64 88 chr15 59441770 59442158 -44052816 + MTE2a LTR MaLR 1 379 0 7 1038 332 382 38 43 chr15 59442159 59442394 -44052580 + L1MEc LINE L1 1083 1316 -5084 7 1038 499 239 23 62 chr15 59442461 59442635 -44052339 + MTE2a LTR MaLR 245 404 -17 7 1038 3257 114 54 81 chr15 59442665 59443255 -44051719 + RMER15 LTR ERVL 1 574 -1 7 1038 203 240 173 0 chr15 59443397 59443472 -44051502 - MIRm SINE MIR -132 144 57 7 1038 261 0 0 0 chr15 59443632 59443661 -44051313 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1038 324 184 90 26 chr15 59443790 59443868 -44051106 - PB1D10 SINE Alu -1 116 34 7 1038 198 260 157 74 chr15 59444466 59444574 -44050400 - MER5A DNA MER1_type -29 160 44 7 1038 180 111 0 0 chr15 59444684 59444711 -44050263 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1038 1057 83 14 0 chr15 59444714 59444859 -44050115 - B1_Mm SINE Alu 0 147 1 8 1038 294 133 222 0 chr15 59444861 59444951 -44050023 - Lx9 LINE L1 -1 7643 7534 8 1038 368 55 18 0 chr15 59444968 59445023 -44049951 + (TAGA)n Simple_repeat Simple_repeat 4 59 0 8 1038 454 242 0 39 chr15 59445048 59445151 -44049823 + PB1D9 SINE Alu 9 107 -13 8 1038 776 227 43 11 chr15 59445189 59445376 -44049598 + B3 SINE B2 21 213 -3 8 1038 400 196 106 53 chr15 59445377 59445490 -44049484 - PB1D9 SINE Alu 0 120 2 8 1038 209 33 33 0 chr15 59445565 59445595 -44049379 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 1038 352 247 23 23 chr15 59445808 59445895 -44049079 + ORR1E LTR MaLR 1 87 -272 8 1038 246 290 78 20 chr15 59446304 59446406 -44048568 - ID_B1 SINE B4 -95 129 22 8 1038 226 241 56 0 chr15 59446365 59446419 -44048555 - ID4_ SINE ID -22 61 5 8 1038 180 0 0 0 chr15 59446628 59446648 -44048326 + (CCCCCA)n Simple_repeat Simple_repeat 6 25 0 8 1038 1130 61 0 7 chr15 59447628 59447777 -44047197 + B1_Mus1 SINE Alu 1 148 0 8 1038 3731 194 95 5 chr15 59447949 59448887 -44046087 - Lx5 LINE L1 -92 6958 5900 8 1038 258 295 0 33 chr15 59449038 59449129 -44045845 + MLT1A1 LTR MaLR 314 401 -7 8 1038 26 30 0 0 chr15 59449139 59449172 -44045802 + AT_rich Low_complexity Low_complexity 1 33 0 8 1038 224 245 0 0 chr15 59449566 59449615 -44045359 + A-rich Low_complexity Low_complexity 2 50 0 8 1038 874 247 123 38 chr15 59449839 59449891 -44045083 - MTEb LTR MaLR 0 379 327 8 1038 540 0 0 0 chr15 59449891 59449951 -44045023 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 8 1038 874 247 123 38 chr15 59449951 59450005 -44044969 - MTEb LTR MaLR -53 326 246 8 1038 417 95 0 0 chr15 59450005 59450068 -44044906 + (TG)n Simple_repeat Simple_repeat 1 63 0 8 1038 874 247 123 38 chr15 59450068 59450276 -44044698 - MTEb LTR MaLR -134 245 39 8 1038 2046 142 83 0 chr15 59450592 59450999 -44043975 - RMER10A LTR ERVL -1 441 1 8 1038 231 36 0 0 chr15 59452055 59452083 -44042891 + (CTG)n Simple_repeat Simple_repeat 3 30 0 8 1038 501 221 5 2 chr15 59452381 59452827 -44042147 + (CA)n Simple_repeat Simple_repeat 1 447 0 8 1038 258 136 0 0 chr15 59452835 59452879 -44042095 + (TCC)n Simple_repeat Simple_repeat 1 44 0 8 1038 374 260 50 64 chr15 59452879 59453019 -44041955 - B4A SINE B4 -148 144 7 8 1038 216 0 0 0 chr15 59453030 59453054 -44041920 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 8 1038 377 293 10 0 chr15 59453058 59453157 -44041817 - B1F1 SINE Alu -7 142 43 8 1038 255 268 124 0 chr15 59453844 59453941 -44041033 + LTR16A LTR ERVL 330 438 -13 8 1038 211 311 0 26 chr15 59454609 59454685 -44040289 + PB1 SINE Alu 1 74 -53 8 1038 485 222 0 48 chr15 59454771 59454875 -44040099 + PB1D10 SINE Alu 13 111 -6 8 1038 259 289 54 32 chr15 59455337 59455430 -44039544 - RSINE1 SINE B4 -69 96 2 8 1038 902 313 46 30 chr15 59455504 59456004 -44038970 - L1_Mur3 LINE L1 -212 5668 5161 8 1038 1138 50 0 0 chr15 59457569 59457708 -44037266 + B1_Mus1 SINE Alu 1 139 -9 8 1038 285 51 0 0 chr15 59457708 59457747 -44037227 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 1038 554 183 114 8 chr15 59458153 59458285 -44036689 - B1_Mus2 SINE Alu -1 146 1 8 1038 23 0 0 0 chr15 59458287 59458310 -44036664 + AT_rich Low_complexity Low_complexity 1 23 0 8 1038 837 262 60 16 chr15 59458328 59458580 -44036394 - MLT1A1 LTR MaLR 0 408 146 8 1038 263 321 131 6 chr15 59458799 59458959 -44036015 + MLT1H LTR MaLR 72 251 -298 8 1038 239 303 89 20 chr15 59459071 59459172 -44035802 + MLT1H LTR MaLR 370 477 -12 8 1038 918 208 39 70 chr15 59459206 59459491 -44035483 - MER33 DNA MER1_type -5 319 44 8 1038 556 325 105 38 chr15 59460151 59460626 -44034348 + MLT2B4 LTR ERVL 1 497 -18 8 1038 192 77 0 0 chr15 59461095 59461121 -44033853 + (ATTG)n Simple_repeat Simple_repeat 4 29 0 8 1038 234 333 20 20 chr15 59461302 59461400 -44033574 - MIR SINE MIR -15 247 150 8 1038 318 179 153 31 chr15 59461484 59461582 -44033392 + PB1D7 SINE Alu 3 112 -8 8 1038 224 30 30 0 chr15 59461644 59461677 -44033297 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 1038 210 71 0 0 chr15 59462308 59462336 -44032638 + (CAGGG)n Simple_repeat Simple_repeat 1 28 0 8 1038 402 221 0 0 chr15 59462737 59462832 -44032142 + CT-rich Low_complexity Low_complexity 2 96 0 8 1038 573 281 14 7 chr15 59462921 59463068 -44031906 - RSINE1 SINE B4 -16 149 2 8 1038 450 53 0 0 chr15 59463644 59463701 -44031273 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 1038 339 243 0 0 chr15 59463803 59463873 -44031101 - ID4 SINE ID -9 74 5 8 1038 390 237 11 21 chr15 59463878 59463973 -44031001 - PB1D10 SINE Alu -18 99 6 8 1038 250 228 150 75 chr15 59463900 59464033 -44030941 - MT2B LTR ERVL -367 234 92 8 1038 782 132 25 0 chr15 59464064 59464232 -44030742 - B3 SINE B2 -14 181 1 8 1038 357 231 143 0 chr15 59464263 59464354 -44030620 - MIRc SINE MIR -120 148 45 8 1038 325 222 97 0 chr15 59464380 59464430 -44030544 - ID4_ SINE ID -2 81 32 8 1038 405 0 0 0 chr15 59464430 59464475 -44030499 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 1038 325 222 97 0 chr15 59464475 59464496 -44030478 - ID4_ SINE ID -52 31 4 8 1038 463 250 256 0 chr15 59464553 59464721 -44030253 - B3 SINE B2 -5 211 1 8 1038 285 314 28 28 chr15 59464735 59464876 -44030098 - B1F1 SINE Alu -8 141 1 8 1038 203 309 147 11 chr15 59464910 59465005 -44029969 - MIRb SINE MIR -135 133 26 8 1038 243 293 81 0 chr15 59465827 59465926 -44029048 - PB1D10 SINE Alu -5 112 6 8 1038 282 350 76 0 chr15 59465845 59466002 -44028972 - ID_B1 SINE B4 -54 170 2 8 1038 1411 47 26 26 chr15 59466105 59466300 -44028674 - B2_Mm2 SINE B2 0 195 1 8 1038 343 329 32 19 chr15 59467533 59467691 -44027283 - MLT1B LTR MaLR -5 385 226 8 1038 552 297 55 35 chr15 59467864 59468066 -44026908 - MER44B DNA MER2_type 0 550 345 8 1038 505 211 17 17 chr15 59468057 59468159 -44026815 + ID_B1 SINE B4 109 211 -13 8 1038 1109 62 7 0 chr15 59468159 59468304 -44026670 + B1_Mus2 SINE Alu 1 146 -1 8 1038 505 211 17 17 chr15 59468304 59468317 -44026657 + ID_B1 SINE B4 212 224 0 8 1038 617 326 28 36 chr15 59468340 59468571 -44026403 + B4 SINE B4 2 230 -62 8 1038 543 244 31 0 chr15 59468571 59468698 -44026276 + RSINE1 SINE B4 2 132 -33 8 1038 582 224 47 93 chr15 59468747 59468919 -44026055 + RSINE1 SINE B4 2 165 0 8 1038 270 275 0 0 chr15 59469032 59469101 -44025873 + (CA)n Simple_repeat Simple_repeat 2 70 0 8 1038 234 0 0 0 chr15 59469181 59469207 -44025767 + (T)n Simple_repeat Simple_repeat 1 26 0 8 1038 1086 50 0 7 chr15 59469211 59469351 -44025623 - B1_Mus2 SINE Alu -7 140 2 8 1038 480 125 0 0 chr15 59470165 59470261 -44024713 + (TC)n Simple_repeat Simple_repeat 2 97 0 8 1038 282 56 0 0 chr15 59470261 59470297 -44024677 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 1038 216 0 0 0 chr15 59470507 59470531 -44024443 + (C)n Simple_repeat Simple_repeat 1 24 0 8 1038 322 275 62 27 chr15 59470635 59470747 -44024227 - MTEa LTR MaLR -1 378 263 8 1038 292 373 33 14 chr15 59471149 59471361 -44023613 - MLT1H1 LTR MaLR -269 286 71 8 1038 1169 91 6 22 chr15 59471721 59471900 -44023074 + B2_Mm2 SINE B2 2 177 -18 8 1038 479 17 0 16 chr15 59471957 59472018 -44022956 + (CA)n Simple_repeat Simple_repeat 2 61 0 8 1038 850 344 10 13 chr15 59472070 59472379 -44022595 + MTEa LTR MaLR 61 368 -11 8 1038 219 231 24 71 chr15 59472383 59472467 -44022507 + PB1D7 SINE Alu 40 119 -1 8 1038 512 258 44 34 chr15 59472476 59472940 -44022034 + RMER17C LTR ERVK 1 361 -49 8 1038 288 53 0 0 chr15 59474006 59474044 -44020930 + (C)n Simple_repeat Simple_repeat 1 38 0 8 1038 573 286 5 123 chr15 59474242 59474453 -44020521 - ID_B1 SINE B4 -27 197 12 8 1038 231 319 0 27 chr15 59474390 59474464 -44020510 - BC1_Mm scRNA scRNA -78 74 3 8 1038 21 0 0 0 chr15 59474883 59474904 -44020070 + AT_rich Low_complexity Low_complexity 1 21 0 8 1038 210 389 47 8 chr15 59475017 59475144 -44019830 + MIR SINE MIR 20 151 -111 8 1038 432 0 0 0 chr15 59475657 59475705 -44019269 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 1038 440 219 0 20 chr15 59475741 59475890 -44019084 + GA-rich Low_complexity Low_complexity 2 147 0 8 1038 181 317 152 9 chr15 59476549 59476654 -44018320 - L2c LINE L2 -6 3369 3250 8 1038 235 377 57 5 chr15 59476739 59476931 -44018043 - L2c LINE L2 -271 3116 2915 8 1038 382 330 99 33 chr15 59477231 59477504 -44017470 - LTR33A LTR ERVL -20 500 210 8 1038 261 0 0 0 chr15 59477912 59477941 -44017033 + (A)n Simple_repeat Simple_repeat 1 29 0 8 1038 199 270 0 75 chr15 59478651 59478731 -44016243 + L2c LINE L2 3313 3386 -1 8 1038 182 246 65 16 chr15 59479317 59479379 -44015595 + L3 LINE CR1 942 1006 -3483 8 1038 214 147 0 0 chr15 59480158 59480192 -44014782 + (GGA)n Simple_repeat Simple_repeat 1 34 0 8 1038 273 299 26 105 chr15 59487343 59487496 -44007478 - L3 LINE CR1 -11 4478 4338 8 1038 373 250 194 0 chr15 59488231 59488355 -44006619 - B1_Mur1 SINE Alu -1 148 1 8 1038 409 241 17 59 chr15 59488522 59488641 -44006333 + PB1D10 SINE Alu 4 117 0 8 1038 198 91 0 0 chr15 59488668 59488701 -44006273 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 8 1038 541 254 30 8 chr15 59489278 59489409 -44005565 + RSINE1 SINE B4 11 144 -21 8 1038 283 205 101 13 chr15 59489560 59489639 -44005335 - PB1D7 SINE Alu -1 119 34 8 1038 21 0 0 0 chr15 59489658 59489679 -44005295 + AT_rich Low_complexity Low_complexity 1 21 0 8 1038 547 235 27 68 chr15 59490173 59490319 -44004655 + ID_B1 SINE B4 84 223 -1 9 1038 264 30 0 0 chr15 59490809 59490842 -44004132 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1038 262 176 200 13 chr15 59490844 59490919 -44004055 - B1F1 SINE Alu -58 91 3 9 1038 217 155 17 17 chr15 59491467 59491526 -44003448 + (TGGA)n Simple_repeat Simple_repeat 2 60 0 9 1038 424 319 127 0 chr15 59492074 59492240 -44002734 + ID_B1 SINE B4 38 224 0 9 1038 1190 54 0 0 chr15 59492250 59492398 -44002576 + B1_Mus1 SINE Alu 1 148 0 9 1038 222 37 0 0 chr15 59492398 59492425 -44002549 + (A)n Simple_repeat Simple_repeat 1 27 0 9 1038 255 79 0 0 chr15 59492672 59492710 -44002264 + (TGG)n Simple_repeat Simple_repeat 2 39 0 9 1038 388 204 109 18 chr15 59492746 59492856 -44002118 + B1F1 SINE Alu 27 146 -3 9 1038 286 194 73 129 chr15 59492856 59492870 -44002104 + ID_B1 SINE B4 108 224 0 9 1038 225 0 0 0 chr15 59492870 59492895 -44002079 + (A)n Simple_repeat Simple_repeat 1 25 0 9 1038 608 237 160 10 chr15 59492996 59493058 -44001916 + B4A SINE B4 5 79 -213 9 1038 300 53 0 0 chr15 59493058 59493096 -44001878 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 9 1038 608 237 160 10 chr15 59493096 59493233 -44001741 + B4A SINE B4 80 233 -59 9 1038 189 178 0 0 chr15 59493327 59493372 -44001602 + GA-rich Low_complexity Low_complexity 2 46 0 9 1038 1116 169 22 14 chr15 59493514 59493736 -44001238 + URR1B DNA MER1_type 1 224 -1 9 1038 292 197 15 29 chr15 59493878 59493946 -44001028 + B1_Mur2 SINE Alu 83 149 0 9 1038 28 0 0 0 chr15 59493946 59493974 -44001000 + AT_rich Low_complexity Low_complexity 1 28 0 9 1038 222 118 0 0 chr15 59494538 59494572 -44000402 + (TG)n Simple_repeat Simple_repeat 1 34 0 9 1038 564 214 8 32 chr15 59494587 59494837 -44000137 + CT-rich Low_complexity Low_complexity 1 243 0 9 1038 232 279 11 75 chr15 59494837 59494930 -44000044 - B1F SINE Alu -16 133 47 9 1038 279 358 24 8 chr15 59495202 59495326 -43999648 + MIRb SINE MIR 25 151 -117 9 1038 375 121 0 0 chr15 59495940 59495998 -43998976 + (T)n Simple_repeat Simple_repeat 1 58 0 9 1038 249 237 290 40 chr15 59495998 59496174 -43998800 - ID_B1 SINE B4 0 224 5 9 1038 373 257 18 27 chr15 59496181 59496293 -43998681 - PB1D10 SINE Alu -6 111 1 9 1038 515 107 0 12 chr15 59496387 59496472 -43998502 + (GGAA)n Simple_repeat Simple_repeat 4 87 0 9 1038 317 257 23 4 chr15 59496487 59496599 -43998375 - MER5A1 DNA MER1_type -37 129 19 9 1038 310 272 116 9 chr15 59496820 59496928 -43998046 + B1F SINE Alu 9 120 0 9 1038 196 325 12 12 chr15 59497043 59497127 -43997847 + MIR3 SINE MIR 96 179 -29 9 1038 256 307 100 21 chr15 59497572 59497754 -43997220 + MIR SINE MIR 1 191 -71 9 1038 383 250 31 10 chr15 59497937 59498034 -43996940 - PB1D10 SINE Alu -7 110 12 9 1038 230 365 31 10 chr15 59497952 59498049 -43996925 - ID_B1 SINE B4 -48 176 78 9 1038 828 257 30 0 chr15 59498048 59498250 -43996724 + MTD LTR MaLR 14 221 -198 9 1038 493 290 7 21 chr15 59498363 59498504 -43996470 - ID_B1 SINE B4 -62 162 24 9 1038 321 348 24 35 chr15 59499069 59499239 -43995735 + MER2 DNA MER2_type 119 286 -59 9 1038 368 295 70 30 chr15 59499297 59499496 -43995478 - L1M5 LINE L1 -704 5460 5254 9 1038 330 258 9 85 chr15 59499603 59499709 -43995265 - PB1D10 SINE Alu -7 110 13 9 1038 342 123 0 0 chr15 59499910 59499967 -43995007 + (TG)n Simple_repeat Simple_repeat 1 57 0 9 1038 659 188 102 0 chr15 59500222 59500350 -43994624 + MTD LTR MaLR 1 141 -278 1 1038 4457 198 58 58 chr15 59500408 59500713 -43994261 - Lx6 LINE L1 -1 7459 7155 2 1038 1163 58 0 0 chr15 59500713 59500852 -43994122 + B1_Mus1 SINE Alu 1 139 -9 3 1038 522 0 0 0 chr15 59500852 59500910 -43994064 + (CAAAC)n Simple_repeat Simple_repeat 2 59 0 4 1038 4457 198 58 58 chr15 59500910 59501605 -43993369 - Lx6 LINE L1 -306 7154 6459 2 1038 5569 170 34 74 chr15 59501621 59501846 -43993128 - Lx6 LINE L1 -1504 5956 5738 2 1038 1520 58 0 0 chr15 59501846 59502035 -43992939 - B2_Mm1a SINE B2 -3 190 2 5 1038 5569 142 18 80 chr15 59502035 59503014 -43991960 - Lx6 LINE L1 -143 5737 4784 2 1038 660 59 0 0 chr15 59503016 59503101 -43991873 + (TTCC)n Simple_repeat Simple_repeat 4 88 0 6 1038 2478 150 46 15 chr15 59503685 59504160 -43990814 - Lx6 LINE L1 -1087 4793 4304 2 1038 679 187 15 23 chr15 59504254 59504404 -43990570 + ORR1C1 LTR MaLR 1 141 -253 7 1038 310 164 0 38 chr15 59504405 59504487 -43990487 + ORR1B1 LTR MaLR 44 124 -270 8 1038 4996 134 43 15 chr15 59504491 59504534 -43990440 + L1_Mur3 LINE L1 3428 3470 -2410 9 1038 258 32 0 0 chr15 59504534 59504565 -43990409 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1 1038 4996 134 43 15 chr15 59504565 59505259 -43989715 + L1_Mur3 LINE L1 3471 4187 -1693 9 1038 426 20 0 0 chr15 59505259 59505310 -43989664 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1038 4996 134 43 15 chr15 59505310 59505429 -43989545 + L1_Mur3 LINE L1 4188 4307 -1573 9 1038 414 253 0 0 chr15 59506240 59506319 -43988655 - MIRb SINE MIR -136 132 54 1 129 185 315 37 28 chr15 59506644 59506781 -43988193 - MIR SINE MIR -30 232 45 1 1039 1345 172 27 24 chr15 59507247 59507364 -43987610 - RMER17C LTR ERVK -112 298 185 1 1039 909 52 0 0 chr15 59507364 59507479 -43987495 + (GGA)n Simple_repeat Simple_repeat 2 116 0 1 1039 1345 172 27 24 chr15 59507479 59507658 -43987316 - RMER17C LTR ERVK -226 184 2 1 1039 1018 76 15 0 chr15 59508434 59508565 -43986409 + B1_Mus1 SINE Alu 5 137 -11 1 1039 864 0 0 0 chr15 59508566 59508662 -43986312 + (GAA)n Simple_repeat Simple_repeat 3 98 0 1 1039 308 287 126 58 chr15 59508817 59509024 -43985950 - L1ME2 LINE L1 -31 6133 5913 1 1039 861 250 68 32 chr15 59509026 59509104 -43985870 + B4A SINE B4 8 94 -198 1 1039 2007 152 13 155 chr15 59509104 59509563 -43985411 - ORR1B1 LTR MaLR 0 394 1 2 1039 861 250 68 32 chr15 59509563 59509703 -43985271 + B4A SINE B4 95 234 -58 1 1039 841 229 5 55 chr15 59509691 59509890 -43985084 + B3 SINE B2 21 209 -7 2 1039 254 280 0 51 chr15 59509867 59509946 -43985028 + B4A SINE B4 214 288 -4 1 1039 495 0 0 0 chr15 59509963 59510018 -43984956 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1039 346 296 9 36 chr15 59510049 59510161 -43984813 + B1_Mur1 SINE Alu 1 109 -40 2 1039 387 0 0 0 chr15 59510161 59510204 -43984770 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1039 531 0 0 0 chr15 59510205 59510264 -43984710 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 1039 970 262 24 10 chr15 59510356 59510564 -43984410 - ID_B1 SINE B4 -7 217 7 2 1039 288 295 48 32 chr15 59510569 59510695 -43984279 - L1MB5 LINE L1 -33 6141 6014 2 1039 313 333 83 0 chr15 59510811 59510919 -43984055 - MIR SINE MIR -125 137 21 2 1039 222 329 83 74 chr15 59512692 59512922 -43982052 + L4 LINE RTE 1744 1975 -54 2 1039 530 244 170 0 chr15 59512937 59513072 -43981902 - RSINE1 SINE B4 -5 160 3 3 1039 805 237 21 5 chr15 59513136 59513327 -43981647 + MT2A LTR ERVL 1 194 -339 3 1039 596 211 0 75 chr15 59513335 59513468 -43981506 - B1_Mur1 SINE Alu 0 149 27 3 1039 684 211 136 18 chr15 59513489 59513658 -43981316 + B3 SINE B2 1 189 -27 3 1039 1281 67 79 0 chr15 59513660 59513838 -43981136 - B2_Mm2 SINE B2 -3 192 1 3 1039 861 181 24 14 chr15 59513925 59514100 -43980874 + B3 SINE B2 1 174 -19 3 1039 360 338 145 19 chr15 59514114 59514328 -43980646 - L1MEd LINE L1 -5775 344 104 3 1039 452 250 158 0 chr15 59514834 59514954 -43980020 + MTE2b LTR MaLR 1 139 -240 3 1039 414 272 19 37 chr15 59514985 59515092 -43979882 + MTE2b LTR MaLR 272 376 -3 3 1039 629 251 57 61 chr15 59515092 59515288 -43979686 + MTEa LTR MaLR 184 378 -1 3 1039 566 233 231 110 chr15 59516162 59516300 -43978674 - MTEb LTR MaLR -52 327 211 3 1039 636 50 0 0 chr15 59516300 59516380 -43978594 + (GA)n Simple_repeat Simple_repeat 1 80 0 4 1039 566 233 231 110 chr15 59516380 59516531 -43978443 - MTEb LTR MaLR -169 210 5 3 1039 870 232 76 0 chr15 59517396 59517581 -43977393 + ID_B1 SINE B4 3 201 -23 4 1039 4814 229 56 117 chr15 59517747 59519523 -43975451 - Lx5 LINE L1 -18 7032 5283 4 1039 267 191 225 9 chr15 59519523 59519634 -43975340 - B2_Mm2 SINE B2 -1 194 60 4 1039 4814 229 56 117 chr15 59519634 59519685 -43975289 - Lx5 LINE L1 -18 5282 5231 4 1039 1043 95 127 0 chr15 59519685 59519843 -43975131 - B2_Mm1t SINE B2 -13 180 3 4 1039 2935 199 39 178 chr15 59519843 59520115 -43974859 - Lx5 LINE L1 -650 5230 4965 4 1039 1120 173 24 0 chr15 59520096 59520304 -43974670 - Lx5 LINE L1 -3379 2498 2286 4 1039 2028 125 34 15 chr15 59520304 59520629 -43974345 - MTB_Mm LTR MaLR -76 331 1 4 1039 1254 221 6 30 chr15 59520629 59520960 -43974014 - Lx5 LINE L1 -6514 1214 892 4 1039 180 0 0 0 chr15 59521181 59521201 -43973773 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 1039 461 277 21 21 chr15 59521748 59521888 -43973086 + MLT1A0 LTR MaLR 7 146 -219 4 1039 291 242 60 16 chr15 59521916 59522038 -43972936 + MLT1A0 LTR MaLR 227 340 -25 4 1039 236 316 81 57 chr15 59523322 59523446 -43971528 - MIRb SINE MIR -74 194 68 4 1039 199 339 159 11 chr15 59523597 59523773 -43971201 - MIR SINE MIR -13 249 48 4 1039 360 327 28 0 chr15 59524309 59524416 -43970558 - PB1D7 SINE Alu -1 119 10 5 1039 217 279 247 20 chr15 59524313 59524463 -43970511 - ID_B1 SINE B4 -5 219 36 5 1039 282 95 0 0 chr15 59524702 59524744 -43970230 + (TCCC)n Simple_repeat Simple_repeat 1 42 0 5 1039 1090 108 0 0 chr15 59524753 59524901 -43970073 - B1_Mus1 SINE Alu 0 148 1 5 1039 801 234 64 57 chr15 59525633 59525714 -43969260 + ORR1C2 LTR MaLR 81 211 -173 5 1039 438 69 0 0 chr15 59525714 59525772 -43969202 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 5 1039 801 189 60 44 chr15 59525772 59525938 -43969036 + ORR1C2 LTR MaLR 212 384 0 5 1039 1431 250 62 71 chr15 59525943 59526293 -43968681 + MT2A LTR ERVL 1 347 -186 5 1039 1266 34 0 0 chr15 59526293 59526439 -43968535 - B1_Mm SINE Alu -1 146 1 5 1039 1431 250 62 71 chr15 59526439 59526540 -43968434 + MT2A LTR ERVL 348 447 -86 5 1039 1428 151 4 13 chr15 59526570 59526798 -43968176 - URR1A DNA MER1_type 0 226 1 5 1039 291 232 90 0 chr15 59526844 59526934 -43968040 + MTD LTR MaLR 273 379 0 5 1039 540 126 0 0 chr15 59527104 59527191 -43967783 + (TG)n Simple_repeat Simple_repeat 1 87 0 6 1039 762 237 156 59 chr15 59527191 59527429 -43967545 - B4 SINE B4 -22 270 10 6 1039 221 325 35 11 chr15 59527665 59527752 -43967222 + MER5B DNA MER1_type 60 148 -30 6 1039 307 271 83 17 chr15 59527992 59528112 -43966862 + MLT1A1 LTR MaLR 1 128 -280 6 1039 911 239 113 4 chr15 59528216 59528464 -43966510 + B4A SINE B4 4 278 -14 6 1039 519 31 0 0 chr15 59529148 59529213 -43965761 + (CAAAC)n Simple_repeat Simple_repeat 2 66 0 6 1039 242 232 70 28 chr15 59529356 59529427 -43965547 - MTEb LTR MaLR 0 379 306 6 1039 241 298 0 0 chr15 59530030 59530087 -43964887 + PB1D7 SINE Alu 3 59 -61 6 1039 23 0 0 0 chr15 59531169 59531192 -43963782 + AT_rich Low_complexity Low_complexity 1 23 0 6 1039 564 281 18 48 chr15 59531195 59531363 -43963611 - RSINE1 SINE B4 0 165 3 6 1039 1754 10 0 0 chr15 59531699 59531891 -43963083 - B2_Mm1a SINE B2 0 193 2 7 1039 704 264 11 63 chr15 59532163 59532337 -43962637 + B3 SINE B2 1 165 -51 7 1039 546 109 0 0 chr15 59532356 59532457 -43962517 + (TC)n Simple_repeat Simple_repeat 1 101 0 7 1039 210 270 129 10 chr15 59532522 59532623 -43962351 + MIRm SINE MIR 52 164 -112 7 1039 1152 243 128 15 chr15 59532745 59533088 -43961886 - Lx8 LINE L1 -1 7472 7091 7 1039 322 236 52 78 chr15 59533703 59533818 -43961156 + MLT1A0 LTR MaLR 6 117 -248 7 1039 831 95 14 55 chr15 59533902 59534047 -43960927 - URR1B DNA MER1_type 0 225 87 7 1039 688 298 59 68 chr15 59534300 59534771 -43960203 - L1MA4 LINE L1 -367 5933 5467 7 1039 351 360 16 8 chr15 59535003 59535129 -43959845 + MIR SINE MIR 19 145 -63 7 1039 1079 101 3 0 chr15 59535372 59535730 -43959244 + (TCC)n Simple_repeat Simple_repeat 1 359 0 7 1039 924 9 0 0 chr15 59535730 59535835 -43959139 + (TTC)n Simple_repeat Simple_repeat 1 105 0 8 1039 236 380 11 0 chr15 59535845 59535937 -43959037 - B1_Mus1 SINE Alu -27 121 29 8 1039 285 29 0 0 chr15 59536068 59536102 -43958872 + (GA)n Simple_repeat Simple_repeat 2 35 0 8 1039 242 286 106 94 chr15 59536175 59536345 -43958629 + MER5B DNA MER1_type 7 178 0 8 1039 509 345 40 10 chr15 59536474 59536692 -43958282 + MIR SINE MIR 15 245 -23 8 1039 822 248 101 64 chr15 59537009 59537354 -43957620 + ORR1E LTR MaLR 1 358 -1 8 1039 232 283 17 0 chr15 59537677 59537737 -43957237 + MLT1H LTR MaLR 70 130 -419 8 1039 540 302 77 20 chr15 59538063 59538259 -43956715 + B4A SINE B4 2 208 -84 8 1039 471 35 0 0 chr15 59538268 59538325 -43956649 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 1039 186 320 158 10 chr15 59538925 59539026 -43955948 + L4 LINE RTE 1017 1132 -897 8 1039 360 301 18 88 chr15 59539469 59539640 -43955334 + HAL1-2a_MD LINE L1 2349 2507 -517 9 1039 298 317 41 5 chr15 59539756 59539871 -43955103 - MIRb SINE MIR -27 241 114 9 1039 396 0 0 0 chr15 59539883 59539927 -43955047 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 9 1039 286 294 23 0 chr15 59540116 59540217 -43954757 - MER33 DNA MER1_type -101 108 3 9 1039 684 212 51 0 chr15 59541095 59541232 -43953742 - B1_Mur3 SINE Alu -1 148 5 9 1039 288 0 0 0 chr15 59541623 59541655 -43953319 + (TGAG)n Simple_repeat Simple_repeat 1 32 0 9 1039 996 9 0 0 chr15 59541800 59541913 -43953061 + (TTC)n Simple_repeat Simple_repeat 2 114 0 9 1039 633 170 10 9 chr15 59541913 59542021 -43952953 - B1_Mur1 SINE Alu -40 109 9 9 1039 420 305 90 28 chr15 59542021 59542049 -43952925 - B4A SINE B4 -79 213 66 9 1039 3444 35 2 0 chr15 59542286 59542681 -43952293 - MTA_Mm LTR MaLR 0 396 1 9 1039 731 22 0 21 chr15 59543079 59543173 -43951801 + (TCCC)n Simple_repeat Simple_repeat 4 95 0 1 1039 1202 34 17 8 chr15 59543183 59543429 -43951545 + (TCTA)n Simple_repeat Simple_repeat 1 248 0 1 1039 311 272 62 0 chr15 59543431 59543512 -43951462 - B1F SINE Alu -8 141 56 1 1039 766 284 96 45 chr15 59543552 59543887 -43951087 - Lx6 LINE L1 0 7460 7109 1 1039 777 236 0 0 chr15 59544482 59544621 -43950353 + B1_Mur4 SINE Alu 1 139 -11 1 1039 333 0 0 0 chr15 59544621 59544658 -43950316 + (CAA)n Simple_repeat Simple_repeat 2 38 0 1 1039 510 312 0 46 chr15 59544668 59544803 -43950171 + ID_B1 SINE B4 79 210 -14 1 1039 846 98 0 0 chr15 59544803 59544925 -43950049 + (TATATG)n Simple_repeat Simple_repeat 2 123 0 1 1039 498 75 0 0 chr15 59544925 59544992 -43949982 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 1039 510 319 22 65 chr15 59544992 59545031 -43949943 + ID_B1 SINE B4 211 251 -41 1 1039 290 176 105 26 chr15 59545624 59545700 -43949274 - RMER21B LTR ERV1 -113 834 753 1 1039 442 284 117 63 chr15 59545708 59546127 -43948847 - RMER21B LTR ERV1 -275 567 83 1 1039 375 338 63 25 chr15 59547045 59547226 -43947748 + Charlie1a DNA MER1_type 1087 1278 -177 1 1039 2473 155 142 21 chr15 59547226 59547739 -43947235 + RMER15 LTR ERVL 1 575 0 1 1039 375 338 63 25 chr15 59547739 59547794 -43947180 + Charlie1a DNA MER1_type 1279 1331 -124 1 1039 234 180 0 57 chr15 59547801 59547854 -43947120 + PB1D10 SINE Alu 41 90 -27 1 1039 228 260 13 40 chr15 59547854 59547877 -43947097 + ID_B1 SINE B4 122 195 -29 1 1039 24 0 0 0 chr15 59547955 59547979 -43946995 + AT_rich Low_complexity Low_complexity 1 24 0 1 1039 531 281 48 7 chr15 59547990 59548137 -43946837 + B4 SINE B4 89 241 -51 1 1039 255 31 0 0 chr15 59548198 59548230 -43946744 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1039 447 245 47 0 chr15 59549542 59549648 -43945326 - B1F1 SINE Alu -38 111 1 1 1039 570 267 13 82 chr15 59549559 59549661 -43945313 - ID_B1 SINE B4 -52 172 81 1 1039 531 56 0 0 chr15 59549661 59549732 -43945242 + (TATG)n Simple_repeat Simple_repeat 2 72 0 1 1039 570 284 18 78 chr15 59549732 59549807 -43945167 - ID SINE ID -211 81 5 1 1039 372 238 89 16 chr15 59549896 59550020 -43944954 - MTE2a LTR MaLR 0 379 247 1 1039 459 0 0 0 chr15 59551252 59551303 -43943671 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 1039 432 0 0 0 chr15 59551303 59551350 -43943624 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1039 2879 102 5 5 chr15 59551493 59551896 -43943078 + RLTR9D LTR ERVK 1 403 0 1 1039 267 255 141 10 chr15 59553714 59553813 -43941161 + MER94 DNA AcHobo 4 115 -19 1 1039 498 284 91 16 chr15 59554445 59554631 -43940343 + MIRb SINE MIR 54 253 -15 1 1039 1544 265 34 6 chr15 59554858 59555215 -43939759 - MTE2b LTR MaLR -3 376 10 1 1039 308 325 26 0 chr15 59555474 59555588 -43939386 + MLT2B3 LTR ERVL 1 117 -437 1 1039 536 276 79 0 chr15 59555800 59556073 -43938901 + MTEa LTR MaLR 8 367 -12 1 1039 241 305 47 47 chr15 59556402 59556550 -43938424 - MIRc SINE MIR -77 191 44 1 1039 351 0 0 0 chr15 59556783 59556822 -43938152 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1039 221 277 66 74 chr15 59556913 59557034 -43937940 - MIRc SINE MIR -49 159 40 1 1039 231 298 47 19 chr15 59558028 59558134 -43936840 + LTR16E1 LTR ERVL 422 530 -8 1 1039 497 307 0 16 chr15 59558815 59558970 -43936004 - MTE2b LTR MaLR -216 163 13 1 1039 567 108 0 0 chr15 59559431 59559524 -43935450 + (TG)n Simple_repeat Simple_repeat 2 94 0 1 1039 181 217 43 0 chr15 59560548 59560594 -43934380 + MIRc SINE MIR 117 164 -104 1 1039 612 0 0 0 chr15 59561509 59561577 -43933397 + (TTCCC)n Simple_repeat Simple_repeat 3 70 0 1 1039 382 349 64 23 chr15 59561643 59561816 -43933158 + MLT1F2 LTR MaLR 20 199 -356 1 1039 268 278 39 58 chr15 59563174 59563277 -43931697 + Charlie9 DNA MER1_type 3 103 -2654 1 1039 387 0 0 0 chr15 59563311 59563354 -43931620 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1039 854 172 0 0 chr15 59563356 59563490 -43931484 + B1_Mm SINE Alu 4 137 -10 1 1039 218 211 0 0 chr15 59563547 59563585 -43931389 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 1 1039 459 308 117 32 chr15 59563612 59563810 -43931164 + MLT1F2 LTR MaLR 194 494 -186 1 1039 229 273 89 25 chr15 59564022 59564101 -43930873 + MIR3 SINE MIR 98 181 -27 1 1039 429 20 0 0 chr15 59564157 59564207 -43930767 + (TTA)n Simple_repeat Simple_repeat 2 51 0 1 1039 285 349 40 14 chr15 59564207 59564344 -43930630 + Tigger7 DNA MER2_type 2333 2475 -16 1 1039 1112 106 6 0 chr15 59564469 59564639 -43930335 + (GAA)n Simple_repeat Simple_repeat 1 171 0 1 1039 216 0 0 0 chr15 59564967 59564991 -43929983 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1039 486 0 0 0 chr15 59564991 59565045 -43929929 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 1039 228 298 65 28 chr15 59565130 59565237 -43929737 + L2a LINE L2 3026 3136 -239 1 1039 1261 128 66 9 chr15 59565372 59565585 -43929389 + URR1B DNA MER1_type 1 225 0 1 1039 252 248 130 28 chr15 59565586 59565694 -43929280 + L2a LINE L2 3301 3419 -7 1 1039 450 127 0 0 chr15 59565948 59566019 -43928955 + (GGGAGA)n Simple_repeat Simple_repeat 3 73 0 1 1039 1146 188 5 5 chr15 59566501 59566699 -43928275 - B3 SINE B2 -10 206 9 1 1039 228 333 45 27 chr15 59566736 59566847 -43928127 + MIRm SINE MIR 44 156 -120 1 1039 285 250 75 11 chr15 59567425 59567518 -43927456 + MIR3 SINE MIR 93 191 -17 1 1039 195 42 0 0 chr15 59567764 59567788 -43927186 + (TC)n Simple_repeat Simple_repeat 2 25 0 1 1039 604 237 40 8 chr15 59567799 59567957 -43927017 - L1MB4 LINE L1 -25 6159 5993 1 1039 735 236 163 16 chr15 59568317 59568533 -43926441 + B4 SINE B4 25 275 -17 1 1039 1122 323 129 65 chr15 59569144 59569581 -43925393 - MER21B LTR ERV1 -70 793 326 1 1039 457 250 10 20 chr15 59569581 59569683 -43925291 - PB1D10 SINE Alu -15 102 2 1 1039 1122 323 129 65 chr15 59569683 59569973 -43925001 - MER21B LTR ERV1 -538 325 20 1 1039 814 311 131 71 chr15 59570084 59570579 -43924395 - MLT1F2 LTR MaLR -24 536 12 1 1039 379 312 36 0 chr15 59571243 59571355 -43923619 - PB1D9 SINE Alu 0 120 5 1 1039 378 0 0 0 chr15 59571517 59571559 -43923415 + (TAA)n Simple_repeat Simple_repeat 1 42 0 1 1039 209 291 18 0 chr15 59571788 59571843 -43923131 + L2b LINE L2 3300 3355 -20 1 1039 2987 261 82 39 chr15 59572477 59572831 -43922143 + RCHARR1 DNA MER1_type 9 389 -585 1 1039 233 29 29 0 chr15 59572831 59572865 -43922109 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 1 1039 2987 261 82 39 chr15 59572865 59573430 -43921544 + RCHARR1 DNA MER1_type 390 967 -7 1 1039 635 338 113 26 chr15 59573702 59574012 -43920962 + MLT1D LTR MaLR 151 487 -18 1 1039 1018 249 99 69 chr15 59574707 59574799 -43920175 + MTE2a LTR MaLR 6 80 -299 1 1039 444 19 0 0 chr15 59574799 59574852 -43920122 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1039 1018 249 99 69 chr15 59574852 59575122 -43919852 + MTE2a LTR MaLR 81 379 0 1 1039 180 125 0 0 chr15 59575400 59575432 -43919542 + (TGG)n Simple_repeat Simple_repeat 3 34 0 1 1039 465 333 0 0 chr15 59575481 59575613 -43919361 + ORR1E LTR MaLR 18 149 -210 1 1039 437 300 52 112 chr15 59575630 59575881 -43919093 + ORR1E LTR MaLR 124 359 0 1 1039 1492 22 78 0 chr15 59576607 59576625 -43918349 - B2_Mm1a SINE B2 0 193 176 1 1039 207 0 0 0 chr15 59576625 59576648 -43918326 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1 1039 1492 22 78 0 chr15 59576648 59576808 -43918166 - B2_Mm1a SINE B2 -18 175 2 1 1039 315 0 0 0 chr15 59576994 59577029 -43917945 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 1039 260 127 0 18 chr15 59577029 59577085 -43917889 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1039 4595 55 0 9 chr15 59577173 59577743 -43917231 - L1_Mus1 LINE L1 0 6567 6003 1 1039 298 292 0 0 chr15 59578571 59578643 -43916331 + L3b LINE CR1 226 297 -185 1 1039 399 21 0 0 chr15 59578660 59578708 -43916266 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1039 238 292 125 0 chr15 59579031 59579127 -43915847 - PB1D7 SINE Alu -12 108 1 1 1039 180 0 0 0 chr15 59579715 59579735 -43915239 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1 1039 261 288 32 98 chr15 59579747 59579761 -43915213 - PB1D10 SINE Alu -2 115 1 1 1039 328 330 37 28 chr15 59579761 59579870 -43915104 - ID_B1 SINE B4 -33 191 82 1 1039 594 39 0 0 chr15 59581093 59581170 -43913804 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 0 1 1039 216 0 0 0 chr15 59581189 59581213 -43913761 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 1039 322 244 133 0 chr15 59581521 59581611 -43913363 - B4A SINE B4 -165 127 26 1 1039 558 275 133 29 chr15 59581591 59581831 -43913143 + Kanga1 DNA Tc2 1481 1745 0 1 1039 580 284 54 86 chr15 59583865 59584143 -43910831 - ORR1E LTR MaLR -9 350 82 1 1039 1218 73 6 11 chr15 59584163 59584344 -43910630 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1 1039 645 308 37 27 chr15 59585211 59585398 -43909576 + B3A SINE B2 2 190 -8 1 1039 441 0 0 0 chr15 59585630 59585679 -43909295 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 1039 238 304 70 81 chr15 59585679 59585765 -43909209 - RSINE1 SINE B4 -72 93 9 1 1039 426 206 27 0 chr15 59585778 59585851 -43909123 - ID SINE ID -139 85 11 1 1039 341 117 17 0 chr15 59585856 59585916 -43909058 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 1039 260 226 111 19 chr15 59585927 59586035 -43908939 + Lx8 LINE L1 7343 7460 -13 1 1039 252 211 58 0 chr15 59587062 59587114 -43907860 + B4 SINE B4 2 56 -236 1 1039 285 301 34 67 chr15 59587113 59587247 -43907727 - B1F1 SINE Alu -4 123 1 1 1039 295 269 97 0 chr15 59587282 59587375 -43907599 - MER58B DNA MER1_type -98 243 142 1 1039 540 0 0 0 chr15 59587398 59587458 -43907516 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 1039 390 42 0 0 chr15 59587458 59587505 -43907469 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1039 493 271 15 0 chr15 59587522 59587655 -43907319 - B1F SINE Alu -14 135 1 1 1039 282 125 0 0 chr15 59588042 59588090 -43906884 + (A)n Simple_repeat Simple_repeat 1 48 0 1 1039 258 188 21 0 chr15 59588093 59588141 -43906833 + ID4_ SINE ID 16 64 -19 2 1039 233 162 14 68 chr15 59588474 59588547 -43906427 + (TTATA)n Simple_repeat Simple_repeat 5 73 0 2 1039 824 0 0 10 chr15 59589214 59589311 -43905663 + (TTC)n Simple_repeat Simple_repeat 2 97 0 2 1039 965 43 0 0 chr15 59589311 59589427 -43905547 - B1_Mm SINE Alu -4 143 28 2 1039 430 311 12 42 chr15 59589581 59589749 -43905225 - RSINE1 SINE B4 0 165 3 2 1039 2528 188 64 32 chr15 59589858 59590418 -43904556 + RLTR20A2 LTR ERVK 1 578 0 2 1039 355 267 68 99 chr15 59590570 59590761 -43904213 + MIR SINE MIR 57 241 -21 2 1039 858 83 0 0 chr15 59590807 59590927 -43904047 + (TC)n Simple_repeat Simple_repeat 2 121 0 2 1039 235 325 84 0 chr15 59592084 59592167 -43902807 - MER5B DNA MER1_type -69 109 20 2 1039 683 264 122 9 chr15 59592846 59593060 -43901914 + Lx7 LINE L1 7081 7318 -378 2 1039 879 96 0 0 chr15 59593110 59593246 -43901728 + (CA)n Simple_repeat Simple_repeat 2 137 0 2 1039 249 321 45 0 chr15 59593752 59593864 -43901110 + MIRb SINE MIR 91 207 -61 2 1039 341 264 11 11 chr15 59593910 59594002 -43900972 + ORR1E LTR MaLR 1 92 -267 2 1039 338 299 91 106 chr15 59594034 59594232 -43900742 + ORR1E LTR MaLR 165 359 0 2 1039 769 213 0 7 chr15 59594534 59594676 -43900298 + B1_Mus2 SINE Alu 5 145 -2 2 1039 180 0 0 0 chr15 59594728 59594748 -43900226 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 1039 365 185 11 27 chr15 59595444 59595534 -43899440 + ORR1D1 LTR MaLR 292 384 0 2 1039 2066 73 70 0 chr15 59595841 59596127 -43898847 + RLTR10D LTR ERVK 1 306 -53 2 1039 34865 175 8 11 chr15 59596132 59602012 -43892962 + IAP-d-int LTR ERVK 323 6184 -358 2 1039 2716 188 21 22 chr15 59602055 59602690 -43892284 + IAP-d-int LTR ERVK 5645 6542 0 2 1039 2655 73 56 0 chr15 59602690 59603030 -43891944 + RLTR10D LTR ERVK 1 359 0 2 1039 518 106 0 50 chr15 59603400 59603539 -43891435 + (CCAA)n Simple_repeat Simple_repeat 4 135 0 2 1039 825 292 80 54 chr15 59603569 59603905 -43891069 - ORR1E LTR MaLR -6 353 9 2 1039 255 302 116 16 chr15 59604081 59604202 -43890772 + Charlie19a DNA Charlie 98 230 -156 2 1039 381 22 0 0 chr15 59604272 59604318 -43890656 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1039 578 223 36 7 chr15 59604318 59604458 -43890516 + Charlie19a DNA Charlie 243 386 0 2 1039 317 315 56 7 chr15 59604788 59604932 -43890042 + MLT1J1 LTR MaLR 36 186 -258 2 1039 319 352 190 38 chr15 59605195 59605557 -43889417 - LTR79 LTR ERVL -110 417 1 2 1039 682 239 0 7 chr15 59606055 59606194 -43888780 + B1_Mur2 SINE Alu 2 139 -10 2 1039 429 20 0 0 chr15 59606194 59606244 -43888730 + (TAA)n Simple_repeat Simple_repeat 2 51 0 2 1039 840 290 9 0 chr15 59606388 59606602 -43888372 + B3 SINE B2 1 216 0 2 1039 1122 266 55 3 chr15 59606623 59606989 -43887985 + L1MB3 LINE L1 5749 6133 -50 2 1039 270 351 78 12 chr15 59607633 59607800 -43887174 + MIRb SINE MIR 22 199 -69 2 1039 206 362 9 19 chr15 59607806 59607913 -43887061 + CT-rich Low_complexity Low_complexity 3 108 0 2 1039 180 0 0 0 chr15 59607915 59607935 -43887039 + (TCC)n Simple_repeat Simple_repeat 2 21 0 2 1039 926 241 142 39 chr15 59609742 59610193 -43884781 - MT2A LTR ERVL 0 533 56 2 1039 339 89 0 0 chr15 59610210 59610266 -43884708 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 2 1039 886 159 0 0 chr15 59610269 59610407 -43884567 + B1_Mus1 SINE Alu 1 138 -10 2 1039 215 95 95 0 chr15 59610415 59610478 -43884496 + (CAAAC)n Simple_repeat Simple_repeat 5 73 0 2 1039 607 179 0 9 chr15 59610506 59610613 -43884361 - MT2A LTR ERVL -427 106 1 2 1039 1127 187 39 10 chr15 59611050 59611255 -43883719 - B3 SINE B2 -5 211 1 2 1039 219 36 0 0 chr15 59611257 59611285 -43883689 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 2 1039 318 288 11 119 chr15 59611500 59611677 -43883297 + MLT1B LTR MaLR 187 344 -46 2 1039 329 169 0 30 chr15 59611676 59611743 -43883231 + B4 SINE B4 28 92 -200 2 1039 405 324 25 66 chr15 59612383 59612648 -43882326 - MLT1H2 LTR MaLR 0 680 192 2 1039 244 290 99 36 chr15 59613980 59614091 -43880883 + MIR SINE MIR 120 237 -25 2 1039 198 0 0 0 chr15 59615037 59615059 -43879915 + (TGGGGG)n Simple_repeat Simple_repeat 1 22 0 2 1039 230 224 0 0 chr15 59615227 59615285 -43879689 + G-rich Low_complexity Low_complexity 1 58 0 2 1039 368 329 19 44 chr15 59615315 59615474 -43879500 + MamGypLTR3 LTR Gypsy 680 834 -5 2 1039 198 0 0 0 chr15 59615907 59615929 -43879045 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1039 246 160 0 0 chr15 59616998 59617048 -43877926 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1039 213 300 33 0 chr15 59617253 59617343 -43877631 + CT-rich Low_complexity Low_complexity 1 93 0 2 1039 871 86 22 22 chr15 59618110 59618289 -43876685 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 2 1039 369 0 0 0 chr15 59618573 59618614 -43876360 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1039 396 0 0 0 chr15 59619133 59619177 -43875797 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1039 417 16 0 46 chr15 59619402 59619467 -43875507 + (TTCA)n Simple_repeat Simple_repeat 1 62 0 2 1039 529 332 117 76 chr15 59619929 59620271 -43874703 - ORR1E LTR MaLR 0 359 4 2 1039 915 10 0 0 chr15 59621390 59621494 -43873480 + (TCTCCC)n Simple_repeat Simple_repeat 6 109 0 2 1039 920 307 113 34 chr15 59622443 59622770 -43872204 - ORR1E LTR MaLR -6 353 1 2 1039 197 238 29 73 chr15 59624120 59624188 -43870786 + L2c LINE L2 3101 3165 -222 2 1039 246 312 36 30 chr15 59624375 59624504 -43870470 + MIRb SINE MIR 11 141 -127 2 1039 369 0 0 0 chr15 59624525 59624566 -43870408 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 2 1039 240 280 128 1 chr15 59625794 59625902 -43869072 - MIRm SINE MIR -85 123 8 2 1039 2039 122 18 56 chr15 59626113 59626451 -43868523 - ORR1A3 LTR MaLR 0 326 2 2 1039 301 304 0 12 chr15 59628053 59628133 -43866841 + ID4_ SINE ID 3 81 -2 2 1039 657 297 172 53 chr15 59629484 59629804 -43865170 - ORR1E LTR MaLR 0 359 2 2 1039 699 281 94 89 chr15 59630576 59630959 -43864015 + MLT1B LTR MaLR 1 385 -5 2 1039 286 297 43 21 chr15 59631302 59631395 -43863579 + B4A SINE B4 42 136 -156 2 1039 729 96 0 0 chr15 59631508 59631633 -43863341 + (TC)n Simple_repeat Simple_repeat 1 125 0 2 1039 546 16 0 0 chr15 59631633 59631695 -43863279 + (CA)n Simple_repeat Simple_repeat 1 63 0 2 1039 3529 13 5 8 chr15 59632040 59632437 -43862537 + MTA_Mm LTR MaLR 1 396 0 2 1039 9263 35 4 1 chr15 59632437 59633532 -43861442 + MTA_Mm-int LTR MaLR 1 1098 0 2 1039 3555 15 5 0 chr15 59633532 59633926 -43861048 + MTA_Mm LTR MaLR 1 396 0 2 1039 429 324 81 17 chr15 59635049 59635222 -43859752 + MIR SINE MIR 23 206 -56 2 1039 605 307 27 111 chr15 59635222 59635573 -43859401 + ORR1E LTR MaLR 8 364 -15 2 1039 541 89 10 19 chr15 59636445 59636548 -43858426 + (CAAG)n Simple_repeat Simple_repeat 1 102 0 2 1039 351 253 98 32 chr15 59637058 59637201 -43857773 + MIR SINE MIR 13 170 -98 2 1039 249 293 89 70 chr15 59637301 59637459 -43857515 - MIR3 SINE MIR -47 161 1 2 1040 273 333 114 32 chr15 59637888 59638108 -43856866 - L2b LINE L2 -201 3174 2937 2 1040 615 144 0 0 chr15 59638459 59638598 -43856376 + (GA)n Simple_repeat Simple_repeat 2 140 0 2 1040 383 379 82 5 chr15 59638680 59638900 -43856074 + MLT1H LTR MaLR 49 285 -264 2 1040 254 282 224 22 chr15 59639146 59639280 -43855694 + MER58A DNA MER1_type 64 224 0 2 1040 258 320 37 83 chr15 59639624 59639733 -43855241 + MIRm SINE MIR 69 172 -104 2 1040 252 0 0 0 chr15 59639734 59639762 -43855212 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 1040 298 336 39 39 chr15 59640182 59640309 -43854665 - L2b LINE L2 -48 3327 3201 2 1040 389 193 0 78 chr15 59641343 59641433 -43853541 + MTEb LTR MaLR 289 371 -8 2 1040 222 37 0 0 chr15 59641490 59641517 -43853457 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 1040 253 241 23 11 chr15 59641547 59641635 -43853339 + (TG)n Simple_repeat Simple_repeat 2 90 0 2 1040 338 307 83 25 chr15 59641864 59642021 -43852953 + MIRb SINE MIR 10 179 -89 2 1040 348 264 26 60 chr15 59642405 59642522 -43852452 + ORR1E LTR MaLR 1 113 -246 2 1040 834 239 122 0 chr15 59643645 59643842 -43851132 + ID_B1 SINE B4 2 222 -2 2 1040 33 0 0 0 chr15 59643844 59643877 -43851097 + AT_rich Low_complexity Low_complexity 1 33 0 2 1040 422 366 6 8 chr15 59644232 59644500 -43850474 + G-rich Low_complexity Low_complexity 1 267 0 2 1040 317 358 31 0 chr15 59644543 59644705 -43850269 + G-rich Low_complexity Low_complexity 5 171 0 2 1040 183 292 66 94 chr15 59644821 59644927 -43850047 + MIR SINE MIR 62 164 -98 2 1040 218 210 17 12 chr15 59644966 59645025 -43849949 - MIRc SINE MIR -99 177 117 2 1040 304 283 141 15 chr15 59645435 59645565 -43849409 - MIRb SINE MIR -131 145 2 2 1040 234 327 79 47 chr15 59645776 59645988 -43848986 + MLT1E2 LTR MaLR 17 293 -334 2 1040 486 306 0 0 chr15 59646045 59646156 -43848818 - PB1D10 SINE Alu -5 112 2 2 1040 745 314 31 9 chr15 59646247 59646472 -43848502 - B4A SINE B4 -8 284 55 2 1040 221 294 144 93 chr15 59646369 59646508 -43848466 - B3A SINE B2 -51 147 2 2 1040 270 0 0 0 chr15 59647159 59647189 -43847785 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1040 340 382 21 38 chr15 59647679 59647916 -43847058 - MIR SINE MIR -7 255 23 2 1040 881 283 50 14 chr15 59648531 59648811 -43846163 + B4A SINE B4 1 290 -2 2 1040 683 24 12 0 chr15 59649218 59649303 -43845671 + (CA)n Simple_repeat Simple_repeat 2 87 0 2 1040 264 329 83 7 chr15 59650352 59650496 -43844478 + MIR SINE MIR 98 252 -10 2 1040 327 104 0 0 chr15 59650498 59650546 -43844428 + (CACCAT)n Simple_repeat Simple_repeat 4 51 0 2 1040 363 44 0 0 chr15 59651251 59651296 -43843678 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1040 290 307 13 13 chr15 59651436 59651512 -43843462 - ID4 SINE ID -4 79 4 3 1040 1070 201 156 40 chr15 59651825 59652146 -43842828 - ORR1E LTR MaLR 0 359 2 3 1040 2587 88 3 29 chr15 59652158 59652533 -43842441 + Lx3_Mus LINE L1 6645 7009 0 3 1040 1018 139 164 5 chr15 59652577 59652772 -43842202 - URR1A DNA MER1_type 0 226 1 3 1040 862 234 69 136 chr15 59653190 59653595 -43841379 + MTE2b LTR MaLR 2 379 0 3 1040 351 0 0 0 chr15 59653600 59653639 -43841335 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1040 423 0 0 0 chr15 59654012 59654059 -43840915 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1040 395 325 63 31 chr15 59654237 59654465 -43840509 + MIRb SINE MIR 1 238 -30 3 1040 200 235 49 0 chr15 59655096 59655177 -43839797 + GA-rich Low_complexity Low_complexity 2 86 0 3 1040 674 174 6 0 chr15 59655306 59655478 -43839496 + (TG)n Simple_repeat Simple_repeat 2 174 0 3 1040 218 228 17 34 chr15 59655545 59655604 -43839370 + G-rich Low_complexity Low_complexity 1 58 0 3 1040 199 310 66 44 chr15 59655703 59655794 -43839180 + MIR SINE MIR 49 141 -67 3 1040 258 346 29 10 chr15 59655846 59655948 -43839026 - MER5A DNA MER1_type -24 165 62 3 1040 826 275 74 0 chr15 59656732 59656976 -43837998 - MER82 DNA MER2_type -379 274 13 3 1040 208 255 147 28 chr15 59660325 59660434 -43834540 - MIR3 SINE MIR -85 123 2 3 1040 220 333 0 0 chr15 59660451 59660514 -43834460 + CT-rich Low_complexity Low_complexity 1 63 0 3 1040 253 351 64 29 chr15 59660651 59660824 -43834150 - MIRm SINE MIR -64 212 34 3 1040 340 336 115 25 chr15 59662695 59662930 -43832044 - MIRc SINE MIR -10 258 3 3 1040 1012 324 55 26 chr15 59663126 59663782 -43831192 - L1_Mur3 LINE L1 -117 5763 5089 3 1040 625 325 104 88 chr15 59664041 59664071 -43830903 + MLT1E1A LTR MaLR 1 35 -525 3 1040 3375 73 0 30 chr15 59664071 59664535 -43830439 - L1Md_F2 LINE L1 0 6582 6133 3 1040 659 320 69 67 chr15 59664535 59665051 -43829923 + MLT1E1A LTR MaLR 36 670 -10 3 1040 190 333 87 10 chr15 59665196 59665299 -43829675 - L2 LINE L2 -3272 147 37 3 1040 233 400 47 41 chr15 59666331 59666503 -43828471 - LTR16C LTR ERVL -124 365 193 3 1040 318 191 0 14 chr15 59666975 59667044 -43827930 - L1_Rod LINE L1 -4346 1501 1434 3 1040 1486 135 122 0 chr15 59667044 59667347 -43827627 + Lx9 LINE L1 7305 7644 0 3 1040 308 313 0 34 chr15 59668016 59668135 -43826839 + MIRc SINE MIR 67 181 -87 3 1040 212 257 158 79 chr15 59668969 59669045 -43825929 + RSINE1 SINE B4 78 159 -6 3 1040 29 28 0 0 chr15 59669731 59669767 -43825207 + AT_rich Low_complexity Low_complexity 1 36 0 3 1040 402 317 27 20 chr15 59670218 59670366 -43824608 + MIRc SINE MIR 57 205 -63 3 1040 967 119 7 0 chr15 59670949 59671092 -43823882 - B1_Mus1 SINE Alu 0 148 5 3 1040 1293 85 0 0 chr15 59671478 59672012 -43822962 + (CA)n Simple_repeat Simple_repeat 1 534 0 3 1040 844 324 92 36 chr15 59672075 59672661 -43822313 - LTR83 LTR ERVL -139 641 23 3 1040 1139 58 0 0 chr15 59674642 59674781 -43820193 + B1_Mus1 SINE Alu 1 139 -9 3 1040 208 0 62 0 chr15 59674781 59674813 -43820161 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1040 1197 269 77 25 chr15 59675176 59675607 -43819367 - Lx8 LINE L1 -2 7471 7019 3 1040 406 272 105 105 chr15 59675607 59675788 -43819186 + Lx8 LINE L1 6831 7011 -462 3 1040 925 305 78 11 chr15 59675783 59676131 -43818843 - Lx9 LINE L1 -152 7492 7122 3 1040 234 252 47 115 chr15 59676582 59676730 -43818244 + MIR SINE MIR 40 177 -85 3 1040 453 66 0 0 chr15 59677630 59677691 -43817283 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 1040 387 0 0 0 chr15 59677760 59677803 -43817171 + (TATG)n Simple_repeat Simple_repeat 2 44 0 3 1040 317 296 51 0 chr15 59677832 59677930 -43817044 - PB1D10 SINE Alu -14 103 1 3 1040 265 385 78 5 chr15 59677976 59678169 -43816805 - MIR SINE MIR -34 228 22 3 1040 230 299 15 0 chr15 59678658 59678742 -43816232 + MIR SINE MIR 43 128 -140 3 1040 285 289 12 12 chr15 59678801 59678885 -43816089 - PB1 SINE Alu -17 110 27 3 1040 426 259 24 14 chr15 59678882 59679030 -43815944 - B1_Mur1 SINE Alu -4 143 2 3 1040 611 209 2 0 chr15 59679078 59679202 -43815772 + B1_Mur3 SINE Alu 24 149 0 3 1040 661 267 15 0 chr15 59679352 59679483 -43815491 + ETnERV2-int LTR ERVK 7070 7202 -204 3 1040 229 213 0 0 chr15 59679880 59679927 -43815047 - ORR1E LTR MaLR -4 355 309 3 1040 2442 223 109 12 chr15 59679963 59680548 -43814426 - Lx6 LINE L1 -26 7434 6793 3 1040 252 264 89 18 chr15 59680720 59680832 -43814142 + Charlie7 DNA MER1_type 2179 2298 -314 3 1040 411 230 268 18 chr15 59680932 59681100 -43813874 - Lx8 LINE L1 -2 7471 7262 3 1040 311 96 75 19 chr15 59681104 59681157 -43813817 + Lx8 LINE L1 7048 7103 -370 3 1040 7805 44 1 6 chr15 59681567 59682514 -43812460 - L1Md_F2 LINE L1 0 6582 5641 3 1040 893 244 14 9 chr15 59682514 59682733 -43812241 - B4 SINE B4 -65 227 8 3 1040 221 374 40 24 chr15 59682800 59682926 -43812048 + MIRb SINE MIR 41 168 -100 3 1040 411 21 0 0 chr15 59682931 59682979 -43811995 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1040 936 241 52 121 chr15 59684505 59684911 -43810063 - MTE2a LTR MaLR -1 378 1 3 1040 531 0 0 0 chr15 59685662 59685721 -43809253 + (TCCC)n Simple_repeat Simple_repeat 4 62 0 3 1040 423 0 0 0 chr15 59685935 59685982 -43808992 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1040 23 33 0 0 chr15 59686172 59686202 -43808772 + AT_rich Low_complexity Low_complexity 1 30 0 3 1040 1148 170 8 43 chr15 59686562 59686699 -43808275 + URR1A DNA MER1_type 1 134 -92 3 1040 4229 35 0 0 chr15 59686699 59687181 -43807793 + LTRIS_Mm LTR ERV1 1 482 0 3 1040 1148 170 8 43 chr15 59687181 59687277 -43807697 + URR1A DNA MER1_type 135 226 0 3 1040 264 339 0 0 chr15 59687890 59688005 -43806969 + PB1D7 SINE Alu 1 115 -5 3 1040 213 119 0 0 chr15 59688971 59689013 -43805961 + (T)n Simple_repeat Simple_repeat 1 42 0 3 1040 302 208 48 68 chr15 59689288 59689391 -43805583 + RMER15 LTR ERVL 61 161 -414 3 1040 795 299 45 10 chr15 59689388 59689679 -43805295 + RMER15 LTR ERVL 275 575 0 3 1040 728 256 78 0 chr15 59690481 59690672 -43804302 - B3 SINE B2 -6 210 5 3 1040 351 44 0 0 chr15 59691053 59691098 -43803876 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1040 21 0 0 0 chr15 59691227 59691248 -43803726 + AT_rich Low_complexity Low_complexity 1 21 0 3 1040 694 216 62 34 chr15 59691259 59691436 -43803538 - B3A SINE B2 -15 183 2 3 1040 266 172 69 0 chr15 59691453 59691511 -43803463 + MLT1A1 LTR MaLR 35 96 -312 3 1040 1079 90 14 0 chr15 59691773 59691918 -43803056 + B1_Mus1 SINE Alu 2 148 0 3 1040 191 274 99 0 chr15 59692268 59692349 -43802625 + MIRm SINE MIR 110 191 -77 3 1040 274 257 13 13 chr15 59692769 59692844 -43802130 - ID4_ SINE ID -6 77 3 3 1040 883 283 70 21 chr15 59693187 59693516 -43801458 - MER2 DNA MER2_type 0 345 1 3 1040 322 243 57 19 chr15 59694567 59694672 -43800302 + MER2 DNA MER2_type 172 280 -65 3 1040 1046 110 6 13 chr15 59694672 59694828 -43800146 + Lx2A1 LINE L1 6236 6390 -618 3 1040 246 42 0 59 chr15 59694838 59694889 -43800085 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 3 1040 244 98 78 0 chr15 59694890 59694941 -43800033 + (CAAAC)n Simple_repeat Simple_repeat 5 59 0 3 1040 4025 122 16 16 chr15 59694946 59695569 -43799405 + Lx2A1 LINE L1 6386 7008 0 3 1040 313 261 45 0 chr15 59696411 59696499 -43798475 - MLT1J1 LTR MaLR -350 94 3 3 1040 1135 162 76 0 chr15 59697069 59697279 -43797695 - URR1A DNA MER1_type 0 226 1 3 1040 315 212 1 14 chr15 59697478 59697564 -43797410 - MIRc SINE MIR -125 143 56 3 1040 257 243 14 14 chr15 59698026 59698097 -43796877 + (GGGTG)n Simple_repeat Simple_repeat 1 71 0 3 1040 638 262 14 7 chr15 59699214 59699360 -43795614 - B1_Mur2 SINE Alu 0 149 3 3 1040 515 320 64 67 chr15 59699393 59699705 -43795269 - MLT1J LTR MaLR -140 372 62 3 1040 973 294 85 76 chr15 59699736 59700180 -43794794 - RMER5 LTR ERV1 0 534 73 3 1040 1361 74 0 36 chr15 59700180 59700376 -43794598 - B2_Mm2 SINE B2 -6 189 1 3 1040 973 294 85 76 chr15 59700376 59700460 -43794514 - RMER5 LTR ERV1 -462 72 1 3 1040 186 261 22 0 chr15 59701021 59701067 -43793907 - MIRc SINE MIR -111 157 111 3 1040 249 273 0 0 chr15 59701265 59701320 -43793654 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1040 1492 203 130 24 chr15 59701566 59701935 -43793039 - MTD LTR MaLR -9 410 3 3 1040 487 126 10 10 chr15 59701945 59702041 -43792933 + (CAA)n Simple_repeat Simple_repeat 1 96 0 3 1040 960 124 6 11 chr15 59702056 59702236 -43792738 + (CCAA)n Simple_repeat Simple_repeat 2 180 0 3 1040 2272 132 56 70 chr15 59702244 59702726 -43792248 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1040 4897 67 4 33 chr15 59702728 59703415 -43791559 + IAPEz-int LTR ERVK 3 662 -5819 3 1040 454 66 0 32 chr15 59703415 59703478 -43791496 + IAPEz-int LTR ERVK 1359 1419 -5062 3 1040 1876 111 4 4 chr15 59703467 59703729 -43791245 + IAPEz-int LTR ERVK 2236 2497 -5183 3 1040 937 88 24 0 chr15 59703724 59703849 -43791125 + IAPEz-int LTR ERVK 4783 4910 -2770 3 1040 21321 16 2 2 chr15 59703851 59706212 -43788762 + IAPEz-int LTR ERVK 4123 6481 0 3 1040 2122 138 48 62 chr15 59706212 59706693 -43788281 + IAPLTR2_Mm LTR ERVK 1 474 -1 3 1040 929 113 6 0 chr15 59706693 59706861 -43788113 + (TCCA)n Simple_repeat Simple_repeat 1 169 0 3 1040 660 77 0 0 chr15 59706863 59706954 -43788020 + (CCAA)n Simple_repeat Simple_repeat 1 91 0 3 1040 1403 226 70 146 chr15 59706971 59707540 -43787434 - RMER15 LTR ERVL -20 555 30 3 1040 270 0 0 0 chr15 59707622 59707652 -43787322 + (TC)n Simple_repeat Simple_repeat 1 30 0 3 1040 228 35 0 0 chr15 59707652 59707680 -43787294 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 1040 236 302 83 19 chr15 59708250 59708358 -43786616 + L2a LINE L2 3303 3417 -9 3 1040 1283 245 49 19 chr15 59709471 59709837 -43785137 - MTEa LTR MaLR -2 377 1 3 1040 692 240 223 31 chr15 59709977 59710300 -43784674 - MT2B LTR ERVL -216 385 1 4 1040 4519 239 128 18 chr15 59710300 59711681 -43783293 - MTEb-int LTR MaLR -43 1537 1 4 1040 795 27 27 0 chr15 59711688 59711798 -43783176 + (TCTA)n Simple_repeat Simple_repeat 4 116 0 4 1040 1335 241 57 29 chr15 59711798 59712149 -43782825 - MTEb LTR MaLR -18 361 1 4 1040 274 248 18 98 chr15 59713168 59713280 -43781694 - MLT1A0 LTR MaLR -260 105 3 4 1040 366 256 22 11 chr15 59713358 59713449 -43781525 - MER82 DNA MER2_type -560 93 2 4 1040 422 280 195 24 chr15 59714470 59714675 -43780299 - MLT1C LTR MaLR -4 463 224 4 1040 768 251 22 0 chr15 59714813 59714996 -43779978 + MTE2a LTR MaLR 5 191 -188 4 1040 1124 315 31 11 chr15 59714996 59715465 -43779509 + Lx7 LINE L1 6917 7413 -60 4 1040 237 181 27 27 chr15 59715539 59715582 -43779392 + A-rich Low_complexity Low_complexity 1 44 0 4 1040 387 0 0 0 chr15 59715582 59715625 -43779349 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1040 237 181 27 27 chr15 59715625 59715655 -43779319 + A-rich Low_complexity Low_complexity 45 74 0 4 1040 566 220 98 25 chr15 59715700 59715863 -43779111 + MTE2a LTR MaLR 205 379 0 4 1040 299 89 18 0 chr15 59716323 59716379 -43778595 + (CTCA)n Simple_repeat Simple_repeat 1 57 0 4 1040 389 99 0 27 chr15 59718156 59718229 -43776745 + (TCTCTG)n Simple_repeat Simple_repeat 2 72 0 4 1040 477 0 0 0 chr15 59718230 59718283 -43776691 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1040 3336 64 5 0 chr15 59718388 59718793 -43776181 + MTB_Mm LTR MaLR 1 407 0 4 1040 31 58 0 0 chr15 59718847 59718899 -43776075 + AT_rich Low_complexity Low_complexity 1 52 0 4 1040 753 252 109 3 chr15 59719907 59720210 -43774764 - L1M5 LINE L1 -2920 3226 2892 4 1040 770 65 19 0 chr15 59720248 59720356 -43774618 + (TTTC)n Simple_repeat Simple_repeat 3 112 0 4 1040 1250 60 0 6 chr15 59720427 59720596 -43774378 + (TTCC)n Simple_repeat Simple_repeat 1 168 0 4 1040 513 226 61 0 chr15 59720663 59720778 -43774196 - RSINE1 SINE B4 -42 123 2 4 1040 483 281 41 167 chr15 59720863 59721252 -43773722 - ORR1E LTR MaLR 0 359 20 4 1040 241 293 197 13 chr15 59721320 59721472 -43773502 - Lx7 LINE L1 -27 7669 7490 4 1040 399 41 0 0 chr15 59721493 59721542 -43773432 + (CAAAC)n Simple_repeat Simple_repeat 1 49 0 4 1040 486 0 0 0 chr15 59721560 59721614 -43773360 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1040 592 324 9 5 chr15 59721634 59721854 -43773120 - Lx7 LINE L1 -402 7294 7074 4 1040 32 26 0 0 chr15 59722151 59722190 -43772784 + AT_rich Low_complexity Low_complexity 1 39 0 4 1040 6059 74 30 1 chr15 59722224 59723020 -43771954 - L1_Mus3 LINE L1 0 6638 5820 4 1040 638 267 143 8 chr15 59723311 59723549 -43771425 - MLT2D LTR ERVL -140 274 5 4 1040 1301 298 106 35 chr15 59724894 59725555 -43769419 + LTR82A LTR ERVL 2 709 -163 4 1040 206 167 23 23 chr15 59725578 59725621 -43769353 + GA-rich Low_complexity Low_complexity 1 43 0 4 1040 276 140 20 20 chr15 59725644 59725695 -43769279 - MLT2D LTR ERVL -363 51 1 4 1040 185 288 96 0 chr15 59726248 59726321 -43768653 + MER5B DNA MER1_type 96 175 -3 4 1040 474 303 42 69 chr15 59726358 59726620 -43768354 - MER58B DNA MER1_type -58 283 29 4 1040 289 317 0 0 chr15 59726837 59726919 -43768055 + MER34 LTR ERV1 1 82 -460 4 1040 187 179 26 0 chr15 59727632 59727671 -43767303 + L2b LINE L2 3328 3367 -8 4 1040 253 140 19 39 chr15 59727669 59727721 -43767253 - L2a LINE L2 -4 3422 3372 4 1040 386 290 61 8 chr15 59729281 59729413 -43765561 + RMER30 DNA MER1_type 38 176 -26 4 1040 332 319 79 58 chr15 59729832 59730072 -43764902 + LTR79 LTR ERVL 273 517 -10 4 1040 327 299 28 9 chr15 59730672 59730780 -43764194 + Lx8 LINE L1 6073 6182 -1291 4 1040 5035 11 0 0 chr15 59730755 59731316 -43763658 + L1Md_A LINE L1 5026 5586 -297 4 1040 9093 9 0 0 chr15 59731316 59732312 -43762662 + L1Md_A LINE L1 5587 6582 0 4 1040 455 181 15 29 chr15 59732338 59732475 -43762499 + (TATATG)n Simple_repeat Simple_repeat 1 135 0 4 1040 2387 298 84 21 chr15 59732533 59733182 -43761792 + Lx8 LINE L1 6252 6940 -533 4 1040 582 15 0 0 chr15 59733182 59733249 -43761725 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 4 1040 2387 298 84 21 chr15 59733249 59733506 -43761468 + Lx8 LINE L1 6941 7214 -259 4 1040 511 155 58 0 chr15 59733524 59733627 -43761347 - Lx7 LINE L1 0 7696 7588 4 1040 578 130 0 0 chr15 59733627 59733719 -43761255 + B1_Mur3 SINE Alu 48 139 -10 4 1040 632 225 0 74 chr15 59733751 59733953 -43761021 - Lx7 LINE L1 -123 7573 7387 4 1040 694 181 98 0 chr15 59733960 59734093 -43760881 + B1_Mus1 SINE Alu 2 147 -1 4 1040 1623 283 80 22 chr15 59734095 59734857 -43760117 + L1_Mur3 LINE L1 2186 2991 -2889 4 1040 2382 274 145 12 chr15 59734853 59735949 -43759025 + L1_Mur3 LINE L1 3784 5025 -855 4 1040 701 150 28 28 chr15 59736873 59737017 -43757957 + B1_Mur2 SINE Alu 6 149 0 4 1040 498 267 50 0 chr15 59738714 59738834 -43756140 + B1F SINE Alu 5 130 -19 4 1040 716 234 0 21 chr15 59739055 59739199 -43755775 + B1_Mur1 SINE Alu 1 141 -8 4 1040 308 284 98 43 chr15 59739251 59739424 -43755550 + MLT1A1 LTR MaLR 1 185 -223 4 1040 204 40 0 0 chr15 59739424 59739449 -43755525 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 4 1040 448 332 57 0 chr15 59740207 59740418 -43754556 + MIRb SINE MIR 27 249 -19 4 1040 931 270 83 26 chr15 59740519 59740869 -43754105 - ORR1D2 LTR MaLR 0 370 1 4 1040 1719 270 153 78 chr15 59740869 59741544 -43753430 - ORR1D2-int LTR MaLR 0 1370 646 4 1040 214 195 24 0 chr15 59741598 59741639 -43753335 + GA-rich Low_complexity Low_complexity 2 43 0 4 1040 264 312 119 91 chr15 59741820 59741996 -43752978 + LTR16B LTR ERVL 51 231 -232 4 1040 556 347 68 32 chr15 59742013 59742453 -43752521 + MLT2C2 LTR ERVL 1 456 -8 4 1040 344 289 102 76 chr15 59742855 59743091 -43751883 + MLT1D LTR MaLR 1 242 -263 4 1040 202 250 42 0 chr15 59744363 59744411 -43750563 + CT-rich Low_complexity Low_complexity 4 53 0 4 1040 423 0 0 0 chr15 59744414 59744461 -43750513 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 1040 365 115 0 47 chr15 59744544 59744608 -43750366 + HAL1-3A_ME LINE L1 1962 2022 -836 4 1040 219 204 0 0 chr15 59744608 59744662 -43750312 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1040 854 173 4 11 chr15 59744684 59744965 -43750009 + (CA)n Simple_repeat Simple_repeat 1 278 0 4 1040 198 0 0 0 chr15 59745654 59745676 -43749298 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1040 348 94 0 0 chr15 59745678 59745731 -43749243 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1040 245 27 54 0 chr15 59747594 59747631 -43747343 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1040 993 60 0 0 chr15 59747634 59747767 -43747207 - B1_Mus2 SINE Alu -6 141 9 4 1040 582 15 0 0 chr15 59747834 59747901 -43747073 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 4 1040 521 99 0 12 chr15 59747929 59748011 -43746963 + (TG)n Simple_repeat Simple_repeat 1 81 0 4 1040 330 289 197 0 chr15 59748039 59748191 -43746783 - B3A SINE B2 -16 182 1 4 1040 279 0 0 0 chr15 59750189 59750220 -43744754 + (CCTG)n Simple_repeat Simple_repeat 1 31 0 4 1040 721 149 7 14 chr15 59750221 59750364 -43744610 + CT-rich Low_complexity Low_complexity 4 145 0 4 1040 201 74 0 0 chr15 59750362 59750389 -43744585 + (TCCCC)n Simple_repeat Simple_repeat 5 31 0 4 1040 708 12 0 0 chr15 59750390 59750471 -43744503 + (TTTTC)n Simple_repeat Simple_repeat 5 85 0 4 1040 1134 219 53 8 chr15 59750471 59750733 -43744241 + MTD LTR MaLR 132 405 -14 4 1040 258 350 10 0 chr15 59750774 59750877 -43744097 - MLT1L LTR MaLR -394 216 113 4 1040 2022 173 8 8 chr15 59751011 59751384 -43743590 - ORR1C1 LTR MaLR -2 376 4 4 1040 260 340 77 0 chr15 59751526 59751682 -43743292 + MIRb SINE MIR 55 222 -46 4 1040 192 271 134 60 chr15 59752369 59752518 -43742456 - L2a LINE L2 -27 3399 3240 4 1040 1737 313 81 30 chr15 59752754 59753558 -43741416 + Lx8 LINE L1 6619 7463 -10 4 1040 377 219 16 40 chr15 59753656 59753780 -43741194 + (TG)n Simple_repeat Simple_repeat 2 122 0 4 1040 432 158 0 0 chr15 59753782 59753858 -43741116 + (TA)n Simple_repeat Simple_repeat 1 76 0 4 1040 401 147 28 45 chr15 59753935 59754113 -43740861 + (TG)n Simple_repeat Simple_repeat 2 176 0 4 1040 232 179 35 35 chr15 59754168 59754284 -43740690 + (TG)n Simple_repeat Simple_repeat 1 116 0 4 1040 888 277 80 40 chr15 59755315 59755642 -43739332 - MLT1A0 LTR MaLR -11 354 15 4 1040 821 205 101 20 chr15 59756507 59756706 -43738268 - B3 SINE B2 0 216 2 4 1040 279 388 50 11 chr15 59756713 59756893 -43738081 - MLT1H1 LTR MaLR -342 213 27 4 1040 955 272 71 19 chr15 59756905 59757269 -43737705 - L1MB3 LINE L1 -3 6180 5798 4 1040 632 289 62 81 chr15 59757595 59757967 -43737007 + MLT1A0 LTR MaLR 1 365 0 4 1040 802 254 35 10 chr15 59758195 59758394 -43736580 - B3 SINE B2 -9 207 4 4 1040 380 227 215 83 chr15 59758600 59758744 -43736230 - RSINE1 SINE B4 0 165 3 4 1040 503 295 12 88 chr15 59758960 59759131 -43735843 + RSINE1 SINE B4 8 165 0 4 1040 186 43 0 0 chr15 59760319 59760342 -43734632 + (CAT)n Simple_repeat Simple_repeat 2 24 0 4 1040 405 58 0 0 chr15 59761883 59761935 -43733039 + (TTA)n Simple_repeat Simple_repeat 3 54 0 4 1040 281 237 0 0 chr15 59761949 59762008 -43732966 - ID2 SINE ID -17 66 8 4 1040 431 332 140 86 chr15 59762324 59762732 -43732242 + MLT2B1 LTR ERVL 1 430 -90 4 1040 839 277 21 34 chr15 59762811 59763050 -43731924 + MTE2b LTR MaLR 2 237 -142 4 1040 597 76 0 0 chr15 59763095 59763187 -43731787 + (CCAA)n Simple_repeat Simple_repeat 2 93 0 4 1040 201 333 59 20 chr15 59763302 59763403 -43731571 + MIRb SINE MIR 50 154 -114 4 1040 313 325 170 30 chr15 59763562 59763797 -43731177 + MLT1L LTR MaLR 335 602 -8 4 1040 221 333 0 0 chr15 59763827 59763914 -43731060 + MIRb SINE MIR 181 267 -1 4 1040 455 342 84 71 chr15 59764138 59764506 -43730468 + MTEb LTR MaLR 1 373 -6 4 1040 253 343 29 10 chr15 59764873 59764976 -43729998 - FordPrefect_a DNA Tip100 0 508 404 4 1040 29 28 0 0 chr15 59765171 59765207 -43729767 + AT_rich Low_complexity Low_complexity 1 36 0 4 1040 2486 231 22 4 chr15 59765304 59765847 -43729127 - Lx9 LINE L1 -179 7465 6913 4 1040 253 421 96 36 chr15 59765854 59766157 -43728817 - FordPrefect_a DNA Tip100 -132 376 56 4 1040 1519 183 81 39 chr15 59766305 59766664 -43728310 - ORR1D1 LTR MaLR 0 374 1 5 1040 477 0 0 0 chr15 59767398 59767451 -43727523 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1040 1005 9 0 0 chr15 59767451 59767564 -43727410 + (GA)n Simple_repeat Simple_repeat 2 115 0 5 1040 2104 131 140 13 chr15 59767564 59767936 -43727038 - MTC LTR MaLR -2 419 1 5 1041 633 288 106 11 chr15 59769163 59769437 -43725537 + RMER15 LTR ERVL 274 573 -2 5 1041 700 195 66 49 chr15 59769856 59769962 -43725012 - RMER1B Other Other -7 1059 957 5 1041 423 0 0 0 chr15 59769962 59770009 -43724965 + (CAAAA)n Simple_repeat Simple_repeat 1 47 0 5 1041 700 195 66 49 chr15 59770009 59770085 -43724889 - RMER1B Other Other -110 956 874 5 1041 8281 50 1 3 chr15 59770108 59771148 -43723826 - L1Md_F2 LINE L1 0 6582 5545 5 1041 775 282 79 25 chr15 59771148 59771428 -43723546 - MTE2a LTR MaLR -84 295 1 5 1041 484 351 41 90 chr15 59771873 59772239 -43722735 + ORR1E LTR MaLR 1 348 -11 5 1041 335 289 106 53 chr15 59772399 59772644 -43722330 - LTR81B LTR ERV1? -1134 259 2 5 1041 268 326 30 20 chr15 59772644 59772744 -43722230 - MIRc SINE MIR -116 152 52 5 1041 689 43 11 0 chr15 59772794 59772887 -43722087 + (TTCC)n Simple_repeat Simple_repeat 1 94 0 5 1041 1999 174 70 0 chr15 59772899 59773256 -43721718 + ORR1C2 LTR MaLR 1 382 -2 5 1041 976 238 96 119 chr15 59773956 59774288 -43720686 + MTD LTR MaLR 1 419 0 5 1041 462 186 21 0 chr15 59774306 59774403 -43720571 - ORR1C2 LTR MaLR -285 99 1 5 1041 945 107 0 0 chr15 59774407 59774556 -43720418 + (GGAA)n Simple_repeat Simple_repeat 1 149 0 5 1041 1160 210 5 5 chr15 59775504 59775719 -43719255 - B3 SINE B2 0 216 2 5 1041 229 339 0 0 chr15 59775844 59775906 -43719068 - ID4_ SINE ID -14 69 8 5 1041 225 333 99 58 chr15 59776001 59776173 -43718801 - B3A SINE B2 -19 179 1 5 1041 7899 64 5 8 chr15 59777961 59779032 -43715942 - L1_Mus2 LINE L1 0 6566 5500 5 1041 3418 90 2 0 chr15 59779030 59779499 -43715475 + L1_Mus2 LINE L1 5024 5493 -390 5 1041 524 89 13 0 chr15 59780060 59780139 -43714835 + (TC)n Simple_repeat Simple_repeat 1 80 0 5 1041 251 290 14 109 chr15 59780385 59780532 -43714442 - L1M4b LINE L1 -5756 1578 1446 5 1041 300 324 118 65 chr15 59780780 59781136 -43713838 - Lx8 LINE L1 -1140 6333 5959 5 1041 1182 288 68 33 chr15 59781213 59781701 -43713273 + Lx8 LINE L1 6968 7472 -1 5 1041 311 253 0 32 chr15 59781712 59781806 -43713168 - Lx6 LINE L1 -1560 5900 5810 5 1041 200 222 0 36 chr15 59782612 59782668 -43712306 + CT-rich Low_complexity Low_complexity 3 56 0 5 1041 368 317 81 8 chr15 59782736 59782860 -43712114 - ID_B1 SINE B4 -1 223 91 5 1041 844 114 7 7 chr15 59783296 59783437 -43711537 + (TCCC)n Simple_repeat Simple_repeat 4 144 0 5 1041 24 32 0 0 chr15 59783560 59783591 -43711383 + AT_rich Low_complexity Low_complexity 1 31 0 5 1041 737 183 30 7 chr15 59783995 59784269 -43710705 + (TA)n Simple_repeat Simple_repeat 1 280 0 5 1041 868 220 74 10 chr15 59785255 59785457 -43709517 + URR1A DNA MER1_type 12 226 0 5 1041 332 298 102 31 chr15 59785703 59785831 -43709143 + LTR45 LTR ERV1 372 508 -17 5 1041 956 285 25 25 chr15 59786682 59786963 -43708011 + B4A SINE B4 1 281 -11 5 1041 22 0 0 0 chr15 59787403 59787425 -43707549 + AT_rich Low_complexity Low_complexity 1 22 0 5 1041 925 312 84 25 chr15 59789078 59789472 -43705502 + LTR16C LTR ERVL 71 487 -2 5 1041 699 99 0 0 chr15 59791072 59791173 -43703801 + (TTTC)n Simple_repeat Simple_repeat 1 101 0 5 1041 1229 75 0 11 chr15 59791174 59791349 -43703625 + (TTCC)n Simple_repeat Simple_repeat 1 173 0 5 1041 23 78 0 0 chr15 59791549 59791600 -43703374 + AT_rich Low_complexity Low_complexity 1 51 0 5 1041 22 70 0 0 chr15 59792223 59792266 -43702708 + AT_rich Low_complexity Low_complexity 1 43 0 5 1041 589 277 71 15 chr15 59792278 59792530 -43702444 + L1_Rod LINE L1 5502 5762 -85 5 1041 295 335 59 19 chr15 59793340 59793492 -43701482 + MLT1H LTR MaLR 38 229 -320 5 1041 4783 115 5 3 chr15 59794443 59795104 -43699870 - Lx LINE L1 -3 6651 5990 5 1041 224 30 0 29 chr15 59795130 59795164 -43699810 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 5 1041 203 0 37 0 chr15 59795180 59795207 -43699767 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 5 1041 240 205 25 37 chr15 59795855 59795936 -43699038 - L1MCa LINE L1 -4512 1996 1917 5 1041 2260 135 112 6 chr15 59796140 59796506 -43698468 - RLTR44A LTR ERVK 0 405 1 5 1041 455 0 18 0 chr15 59796511 59796566 -43698408 + (TTTTG)n Simple_repeat Simple_repeat 5 60 0 5 1041 1121 88 0 0 chr15 59796566 59796702 -43698272 - B1_Mus1 SINE Alu -12 136 1 5 1041 972 338 23 14 chr15 59796912 59797257 -43697717 + MLT1A0 LTR MaLR 1 348 -17 5 1041 435 328 0 0 chr15 59797261 59797392 -43697582 + ID_B1 SINE B4 90 220 -4 5 1041 687 253 7 7 chr15 59797477 59797633 -43697341 - ID_B1 SINE B4 -52 240 81 5 1041 288 248 25 107 chr15 59797526 59797648 -43697326 - MT2B LTR ERVL -338 263 152 5 1041 438 69 0 0 chr15 59797701 59797759 -43697215 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1041 1144 270 36 92 chr15 59798122 59798570 -43696404 + RLTR23 LTR ERV1 8 430 0 5 1041 874 144 194 16 chr15 59799916 59800107 -43694867 + URR1B DNA MER1_type 1 225 0 5 1041 27 0 0 0 chr15 59800193 59800220 -43694754 + AT_rich Low_complexity Low_complexity 1 27 0 5 1041 4953 73 6 20 chr15 59801096 59801148 -43693826 - L1_Mus2 LINE L1 -1 6565 6516 5 1041 3365 56 5 2 chr15 59801148 59801543 -43693431 + MTA_Mm LTR MaLR 1 396 0 5 1041 4953 73 6 20 chr15 59801543 59802131 -43692843 - L1_Mus2 LINE L1 -51 6515 5934 5 1041 959 127 6 0 chr15 59802460 59802617 -43692357 - Lx2B LINE L1 -521 6479 6322 5 1041 2644 151 95 6 chr15 59802614 59803086 -43691888 + Lx2B LINE L1 6485 6998 -2 5 1041 226 312 81 81 chr15 59803088 59803273 -43691701 + MIRc SINE MIR 66 250 -18 5 1041 234 116 0 0 chr15 59803322 59803365 -43691609 + (T)n Simple_repeat Simple_repeat 1 43 0 5 1041 2431 138 16 0 chr15 59804047 59804424 -43690550 - Lx2 LINE L1 0 6997 6615 5 1041 279 256 49 37 chr15 59806227 59806308 -43688666 - MIRb SINE MIR -101 167 86 5 1041 414 0 0 0 chr15 59806521 59806567 -43688407 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1041 324 250 129 10 chr15 59807098 59807199 -43687775 - L2 LINE L2 -579 2840 2728 5 1041 23 54 0 0 chr15 59807287 59807324 -43687650 + AT_rich Low_complexity Low_complexity 1 37 0 5 1041 288 0 0 0 chr15 59807350 59807382 -43687592 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 1041 539 216 21 0 chr15 59807383 59807480 -43687494 - B3A SINE B2 -98 100 2 5 1041 245 306 0 0 chr15 59807530 59807602 -43687372 + GA-rich Low_complexity Low_complexity 2 73 0 5 1041 483 18 0 0 chr15 59807611 59807667 -43687307 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 1041 378 61 0 0 chr15 59807667 59807716 -43687258 + (GA)n Simple_repeat Simple_repeat 1 49 0 5 1041 465 236 109 0 chr15 59807865 59807975 -43686999 + B3 SINE B2 32 153 -63 5 1041 416 51 17 0 chr15 59807975 59808034 -43686940 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 1041 445 271 98 50 chr15 59808034 59808087 -43686887 + B3A SINE B2 141 192 -6 5 1041 1522 171 89 3 chr15 59808309 59808615 -43686359 - IAPEY3_LTR LTR ERVK -7 360 1 5 1041 605 261 56 56 chr15 59808931 59809126 -43685848 + B3A SINE B2 2 196 -2 5 1041 495 0 0 0 chr15 59810532 59810587 -43684387 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1041 180 0 0 0 chr15 59811178 59811198 -43683776 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 1041 342 115 0 0 chr15 59811198 59811259 -43683715 + (GA)n Simple_repeat Simple_repeat 2 62 0 5 1041 4626 76 43 2 chr15 59811794 59812399 -43682575 - L1_Mus3 LINE L1 -1 6637 6008 5 1041 259 323 51 58 chr15 59812511 59812649 -43682325 + MLT1J2 LTR MaLR 281 417 -31 5 1041 331 292 121 20 chr15 59812798 59812997 -43681977 + L1ME3B LINE L1 5862 6080 -160 5 1041 192 152 0 0 chr15 59813098 59813131 -43681843 + (TA)n Simple_repeat Simple_repeat 1 33 0 5 1041 358 308 105 0 chr15 59813544 59813677 -43681297 + Charlie19a DNA Charlie 200 346 -40 5 1041 994 291 50 22 chr15 59814010 59814287 -43680687 - B4 SINE B4 0 292 8 5 1041 1121 128 153 5 chr15 59814661 59814857 -43680117 - URR1A DNA MER1_type 0 226 2 5 1041 299 229 47 24 chr15 59816170 59816255 -43678719 - MTD LTR MaLR -323 96 10 5 1041 622 342 18 5 chr15 59816576 59816799 -43678175 - MIR SINE MIR -12 250 25 5 1041 639 306 0 13 chr15 59817729 59817878 -43677096 - B1_Mur1 SINE Alu -1 148 2 5 1041 440 218 35 0 chr15 59818602 59818689 -43676285 - 5S rRNA rRNA -31 90 1 5 1041 249 297 95 38 chr15 59818850 59818955 -43676019 - MER46C DNA MER2_type -224 114 4 5 1041 256 280 13 0 chr15 59819024 59819099 -43675875 + Lx8 LINE L1 6991 7066 -407 5 1041 184 283 0 140 chr15 59819283 59819390 -43675584 - MIRb SINE MIR -157 111 20 5 1041 1403 204 121 6 chr15 59819444 59819774 -43675200 + ORR1D1 LTR MaLR 1 368 -6 5 1041 488 317 46 77 chr15 59819782 59820042 -43674932 + MLT1D-int LTR MaLR 1120 1371 0 5 1041 705 311 158 23 chr15 59820042 59820433 -43674541 + MLT1D LTR MaLR 15 459 -46 5 1041 423 0 0 0 chr15 59820622 59820669 -43674305 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1041 495 0 0 0 chr15 59820669 59820723 -43674251 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1041 962 267 132 32 chr15 59821215 59821587 -43673387 - Charlie22a DNA MER1_type -12 479 71 5 1041 184 292 282 55 chr15 59821754 59821935 -43673039 - MIRb SINE MIR 0 262 41 5 1041 209 262 32 16 chr15 59822450 59822512 -43672462 + L2a LINE L2 3269 3331 -95 5 1041 333 226 0 0 chr15 59822724 59822777 -43672197 - ID4_ SINE ID -29 54 2 6 1041 585 0 0 0 chr15 59823651 59823716 -43671258 + (GA)n Simple_repeat Simple_repeat 2 66 0 6 1041 315 310 105 30 chr15 59824111 59824244 -43670730 - MER5A DNA MER1_type -3 186 44 6 1041 261 271 38 106 chr15 59824139 59824271 -43670703 + MER5A1 DNA MER1_type 43 165 -1 6 1041 537 308 90 0 chr15 59824946 59825102 -43669872 - ID_B1 SINE B4 -34 190 21 6 1041 315 232 67 59 chr15 59825119 59825238 -43669736 - MLT1G3 LTR MaLR 0 489 370 6 1041 477 297 50 7 chr15 59826791 59826930 -43668044 - MLT1G3 LTR MaLR -429 166 22 6 1041 507 73 0 0 chr15 59827190 59827258 -43667716 + (TCTCCC)n Simple_repeat Simple_repeat 6 73 0 6 1041 254 250 14 172 chr15 59827376 59827521 -43667453 + B4 SINE B4 6 127 -165 6 1041 1445 120 69 15 chr15 59827627 59827889 -43667085 + L1_Mur2 LINE L1 5277 5552 -325 6 1041 204 122 0 0 chr15 59828280 59828321 -43666653 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1041 579 74 0 0 chr15 59829515 59829596 -43665378 + (CA)n Simple_repeat Simple_repeat 1 81 0 6 1041 281 308 26 0 chr15 59829673 59829790 -43665184 - L1M5 LINE L1 -389 5851 5732 6 1041 225 279 152 0 chr15 59829974 59830053 -43664921 - L1M5 LINE L1 -924 5520 5430 6 1041 22 0 0 0 chr15 59830546 59830568 -43664406 + AT_rich Low_complexity Low_complexity 1 22 0 6 1041 518 201 48 14 chr15 59830568 59830590 -43664384 - MYSERV16_I-int LTR ERVK -69 2257 2237 6 1041 4338 138 43 15 chr15 59830590 59831245 -43663729 - Lx4A LINE L1 -1 7057 6385 6 1041 518 201 48 14 chr15 59831245 59831368 -43663606 - MYSERV16_I-int LTR ERVK -90 2236 2107 6 1041 1762 121 48 0 chr15 59831371 59831643 -43663331 - ORR1A2 LTR MaLR -42 285 1 6 1041 4214 175 35 2 chr15 59831643 59832800 -43662174 - L1_Mur2 LINE L1 -4411 1466 375 6 1041 23 0 0 0 chr15 59832804 59832827 -43662147 + AT_rich Low_complexity Low_complexity 1 23 0 6 1041 1700 240 83 49 chr15 59832827 59832980 -43661994 - Lx9 LINE L1 -2 7642 7476 6 1041 374 85 17 0 chr15 59832980 59833039 -43661935 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 1041 1465 248 79 44 chr15 59833039 59833521 -43661453 - Lx9 LINE L1 -169 7475 6985 6 1041 4299 188 75 78 chr15 59833564 59834636 -43660338 - RLTR25A LTR ERVK 0 1103 36 6 1041 744 61 0 0 chr15 59834679 59834777 -43660197 + (TTCC)n Simple_repeat Simple_repeat 3 100 0 6 1041 10384 140 29 39 chr15 59834808 59836671 -43658303 - RLTR22_Mur LTR ERVK 0 1848 5 6 1041 510 256 38 23 chr15 59836671 59836803 -43658171 - B1_Mur2 SINE Alu -14 135 2 6 1041 1425 206 99 10 chr15 59836803 59837186 -43657788 - Lx9 LINE L1 -645 6999 6583 6 1041 318 313 0 15 chr15 59837218 59837354 -43657620 - L1M5 LINE L1 -796 5350 5217 6 1041 191 281 12 0 chr15 59837755 59837837 -43657137 + (TG)n Simple_repeat Simple_repeat 2 84 0 6 1041 314 281 279 22 chr15 59837843 59838072 -43656902 - B4 SINE B4 -4 288 1 6 1041 238 307 77 29 chr15 59838082 59838186 -43656788 - PB1D10 SINE Alu -8 109 1 6 1041 227 203 0 17 chr15 59838330 59838390 -43656584 + CT-rich Low_complexity Low_complexity 2 60 0 6 1041 291 312 0 12 chr15 59839065 59839146 -43655828 - ID2 SINE ID -2 81 2 6 1041 189 0 0 0 chr15 59839238 59839259 -43655715 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1041 24 53 0 0 chr15 59839368 59839406 -43655568 + AT_rich Low_complexity Low_complexity 1 38 0 6 1041 312 309 40 20 chr15 59839779 59839878 -43655096 + MER117 DNA MER1_type 96 196 -1 6 1041 251 351 65 29 chr15 59840268 59840406 -43654568 + MIR3 SINE MIR 26 168 -40 6 1041 1060 261 149 21 chr15 59840696 59841032 -43653942 + MTE2a LTR MaLR 1 379 0 6 1041 203 254 0 0 chr15 59841302 59841361 -43653613 + (TTCTG)n Simple_repeat Simple_repeat 1 59 0 6 1041 265 266 63 110 chr15 59841516 59841643 -43653331 + MER5A DNA MER1_type 69 189 0 6 1041 195 42 0 0 chr15 59842210 59842234 -43652740 + (CAA)n Simple_repeat Simple_repeat 3 26 0 6 1041 444 336 146 60 chr15 59842471 59842880 -43652094 - L1MC4a LINE L1 -1975 5907 5438 6 1041 4717 157 14 4 chr15 59842880 59843665 -43651309 + Lx4A LINE L1 6266 7058 0 6 1041 444 336 146 60 chr15 59843665 59843784 -43651190 - L1MC4a LINE L1 -2445 5437 5334 6 1041 345 308 0 0 chr15 59844164 59844242 -43650732 - ID4 SINE ID -1 82 5 6 1041 795 116 0 0 chr15 59844243 59844364 -43650610 + (TG)n Simple_repeat Simple_repeat 2 122 0 6 1041 938 174 0 0 chr15 59844675 59844819 -43650155 - B1_Mur2 SINE Alu -5 144 1 6 1041 245 111 0 43 chr15 59844868 59844915 -43650059 + GA-rich Low_complexity Low_complexity 3 47 0 6 1041 261 0 0 0 chr15 59848418 59848447 -43646527 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1041 656 326 26 26 chr15 59848540 59848729 -43646245 - ID_B1 SINE B4 -34 190 2 6 1041 205 27 81 0 chr15 59848760 59848797 -43646177 + (TTAA)n Simple_repeat Simple_repeat 3 42 0 6 1041 931 133 22 65 chr15 59848802 59848987 -43645987 - Lx4A LINE L1 -10 7048 6872 6 1041 227 333 162 27 chr15 59849208 59849430 -43645544 + L2 LINE L2 2800 3051 -368 6 1041 6706 74 14 14 chr15 59849469 59850431 -43644543 + L1_Mur1 LINE L1 4916 5877 -9 6 1041 591 305 0 7 chr15 59850431 59850583 -43644391 + MTD LTR MaLR 46 196 -223 6 1041 2814 67 16 3 chr15 59850583 59850970 -43644004 + L1_Mus3 LINE L1 6240 6631 -7 6 1041 312 158 0 0 chr15 59850975 59851032 -43643942 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 6 1041 971 262 33 0 chr15 59851044 59851258 -43643716 + MTD LTR MaLR 196 416 -3 6 1041 218 355 10 43 chr15 59851337 59851455 -43643519 - MIRc SINE MIR -93 169 57 6 1041 423 0 0 0 chr15 59852377 59852424 -43642550 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1041 627 134 0 0 chr15 59852424 59852543 -43642431 + (GA)n Simple_repeat Simple_repeat 1 119 0 6 1041 296 320 58 0 chr15 59854108 59854211 -43640763 + ORR1E LTR MaLR 3 111 -248 6 1041 869 185 6 0 chr15 59854819 59854997 -43639977 + CT-rich Low_complexity Low_complexity 2 180 0 6 1041 342 292 74 95 chr15 59855227 59855469 -43639505 - L2c LINE L2 -227 3160 2924 6 1041 467 186 0 10 chr15 59855708 59855811 -43639163 + (CAGAGA)n Simple_repeat Simple_repeat 4 105 0 6 1041 29 28 0 0 chr15 59856312 59856348 -43638626 + AT_rich Low_complexity Low_complexity 1 36 0 6 1041 374 0 0 21 chr15 59856378 59856425 -43638549 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 1041 360 336 44 7 chr15 59856440 59856575 -43638399 - RSINE1 SINE B4 -21 144 5 6 1041 1777 80 4 11 chr15 59857372 59857638 -43637336 - L1_Mm LINE L1 -485 5398 5135 6 1041 3018 44 6 0 chr15 59857638 59858004 -43636970 + L1_Mus1 LINE L1 6198 6565 -2 6 1041 420 184 200 39 chr15 59858243 59858373 -43636601 - URR1A DNA MER1_type -1 225 75 6 1041 302 376 22 22 chr15 59858428 59858564 -43636410 - MLT2F LTR ERVL -308 355 220 6 1041 291 247 11 0 chr15 59858828 59858917 -43636057 - L1MC4 LINE L1 -479 7563 7474 6 1041 486 0 0 0 chr15 59859025 59859079 -43635895 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 6 1041 1200 36 0 0 chr15 59859079 59859217 -43635757 - B1_Mm SINE Alu -9 138 1 6 1041 659 276 174 29 chr15 59859386 59860088 -43634886 - L1MC4a LINE L1 -1 7881 7078 6 1041 33 0 0 0 chr15 59860088 59860121 -43634853 + AT_rich Low_complexity Low_complexity 1 33 0 6 1041 803 308 4 4 chr15 59860223 59860458 -43634516 - Lx8 LINE L1 -144 7329 7095 6 1041 21 0 0 0 chr15 59861131 59861152 -43633822 + AT_rich Low_complexity Low_complexity 1 21 0 6 1041 1430 295 56 76 chr15 59861161 59861297 -43633677 - Lx9 LINE L1 -16 7628 7509 6 1041 369 0 0 0 chr15 59861297 59861338 -43633636 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1041 1430 295 56 76 chr15 59861338 59861975 -43632999 - Lx9 LINE L1 -136 7508 6872 6 1041 335 164 29 29 chr15 59862995 59863064 -43631910 + MLT1B LTR MaLR 308 376 -14 6 1041 277 306 65 44 chr15 59863132 59863453 -43631521 + HAL1 LINE L1 993 1320 -1187 6 1041 2338 99 12 0 chr15 59863663 59863986 -43630988 - ORR1A2 LTR MaLR 0 327 1 6 1041 21 0 0 0 chr15 59863991 59864012 -43630962 + AT_rich Low_complexity Low_complexity 1 21 0 6 1041 489 348 99 108 chr15 59865117 59865562 -43629412 - LTR16B1 LTR ERVL -9 471 31 6 1041 342 336 90 14 chr15 59865578 59865723 -43629251 + MER45A DNA Tip100 2 157 -21 6 1041 297 75 0 0 chr15 59866031 59866071 -43628903 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1041 578 288 84 15 chr15 59866102 59866363 -43628611 - B4 SINE B4 -12 280 2 6 1041 270 224 0 108 chr15 59866610 59866675 -43628299 - URR1B DNA MER1_type 0 225 168 6 1041 201 152 0 0 chr15 59866819 59866852 -43628122 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 6 1041 234 0 0 0 chr15 59867074 59867100 -43627874 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 6 1041 262 272 9 19 chr15 59867316 59867421 -43627553 + (CAGAGA)n Simple_repeat Simple_repeat 3 106 0 6 1041 1159 75 0 0 chr15 59868022 59868169 -43626805 + B1_Mus1 SINE Alu 2 148 0 6 1041 420 106 48 16 chr15 59868169 59868294 -43626680 + A-rich Low_complexity Low_complexity 2 130 0 6 1041 772 204 0 0 chr15 59868322 59868454 -43626520 + B1_Mus1 SINE Alu 1 132 -16 6 1041 1761 193 46 3 chr15 59868950 59869299 -43625675 - Lx4B LINE L1 0 7058 6695 6 1041 3423 130 44 2 chr15 59869299 59870084 -43624890 - L1_Mur2 LINE L1 -4383 1494 667 6 1041 345 24 0 0 chr15 59870255 59870297 -43624677 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1041 906 305 17 17 chr15 59870454 59870691 -43624283 - B4 SINE B4 -53 239 3 6 1041 991 144 209 0 chr15 59871087 59871274 -43623700 - URR1B DNA MER1_type 0 225 1 6 1041 876 220 11 50 chr15 59871906 59872088 -43622886 - B3 SINE B2 -40 176 2 6 1041 426 300 0 0 chr15 59872145 59872325 -43622649 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 1041 665 275 137 3 chr15 59873426 59873732 -43621242 - Lx9 LINE L1 -39 7605 7259 6 1041 291 161 0 0 chr15 59873763 59873819 -43621155 + (TCTG)n Simple_repeat Simple_repeat 1 56 0 6 1041 240 314 103 11 chr15 59873846 59873933 -43621041 - B3 SINE B2 -30 186 92 6 1041 21 0 0 0 chr15 59874258 59874279 -43620695 + AT_rich Low_complexity Low_complexity 1 21 0 6 1041 4224 98 7 8 chr15 59874279 59874884 -43620090 - L1_Mus4 LINE L1 -3 6633 6030 7 1041 209 324 168 19 chr15 59875263 59875370 -43619604 - MIR3 SINE MIR -27 181 59 7 1041 1291 84 79 0 chr15 59875859 59875879 -43619095 - B2_Mm2 SINE B2 -3 192 159 7 1041 558 0 0 0 chr15 59875879 59875941 -43619033 + (TTTTA)n Simple_repeat Simple_repeat 3 64 0 7 1041 1291 84 79 0 chr15 59875941 59876098 -43618876 - B2_Mm2 SINE B2 -37 158 2 7 1041 2648 16 0 0 chr15 59876127 59876441 -43618533 - L1_Mm LINE L1 -282 5601 5288 7 1041 2344 4 0 0 chr15 59876435 59876708 -43618266 - L1Md_A LINE L1 0 6582 6310 7 1041 9251 10 13 0 chr15 59876707 59877821 -43617153 - L1_Mm LINE L1 -579 5304 4177 7 1041 8318 36 1 0 chr15 59877821 59878807 -43616167 + L1Md_T LINE L1 5596 6582 0 7 1041 329 326 140 6 chr15 59879077 59879241 -43615733 + MIR SINE MIR 9 198 -70 7 1041 600 40 0 0 chr15 59879280 59879355 -43615619 + (TTTC)n Simple_repeat Simple_repeat 4 78 0 7 1041 451 133 22 11 chr15 59879495 59879586 -43615388 + GA-rich Low_complexity Low_complexity 4 95 0 7 1041 302 396 48 40 chr15 59879586 59879836 -43615138 - LTR16E1 LTR ERVL -80 458 207 7 1041 535 309 78 11 chr15 59880868 59881048 -43613926 - MER77 LTR ERVL -1 606 415 7 1041 263 372 15 30 chr15 59881542 59881675 -43613299 + MARNA DNA Mariner 361 491 -95 7 1041 866 60 0 8 chr15 59882759 59882877 -43612097 + (TCTA)n Simple_repeat Simple_repeat 2 118 0 7 1041 672 303 83 33 chr15 59882971 59883247 -43611727 - B4A SINE B4 0 292 3 7 1041 210 37 0 0 chr15 59883608 59883635 -43611339 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 1041 10657 42 2 0 chr15 59885141 59887237 -43607737 - L1Md_F2 LINE L1 -2 6580 4482 7 1041 1025 119 7 0 chr15 59887237 59887388 -43607586 + B2_Mm2 SINE B2 5 156 -39 7 1041 575 327 7 0 chr15 59887719 59887869 -43607105 - RSINE1 SINE B4 -14 151 1 7 1041 453 36 0 0 chr15 59888207 59888262 -43606712 + (TG)n Simple_repeat Simple_repeat 1 55 0 7 1041 339 155 0 0 chr15 59888262 59888346 -43606628 + GA-rich Low_complexity Low_complexity 2 85 0 7 1041 246 288 0 27 chr15 59888457 59888532 -43606442 - MIRc SINE MIR -99 169 97 7 1041 665 82 10 0 chr15 59888638 59888735 -43606239 + (TTCC)n Simple_repeat Simple_repeat 4 101 0 7 1041 316 290 60 110 chr15 59888785 59888967 -43606007 + MLT1J LTR MaLR 224 396 -116 7 1041 901 186 21 64 chr15 59889389 59889625 -43605349 - URR1A DNA MER1_type 0 226 1 7 1041 39543 5 0 1 chr15 59890468 59897052 -43597922 - L1Md_A LINE L1 0 6582 30 7 1041 254 322 211 0 chr15 59897431 59897611 -43597363 + MIRc SINE MIR 46 263 -5 7 1041 248 391 17 9 chr15 59898032 59898148 -43596826 + MIRb SINE MIR 57 173 -95 7 1041 342 61 0 0 chr15 59898164 59898213 -43596761 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 1041 306 303 89 48 chr15 59898623 59898960 -43596014 - L1MB1 LINE L1 -72 6262 5912 7 1041 234 0 0 0 chr15 59898970 59898996 -43595978 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 1041 194 352 65 47 chr15 59899032 59899202 -43595772 - L2c LINE L2 -52 3335 3163 7 1041 203 323 50 114 chr15 59899243 59899383 -43595591 - L2b LINE L2 -19 3356 3226 7 130 2737 188 46 39 chr15 59899589 59900259 -43594715 - Lx9 LINE L1 -8 7636 6962 7 1042 354 261 78 9 chr15 59900265 59900381 -43594593 - Lx9 LINE L1 -1728 5916 5793 7 1042 31 99 0 0 chr15 59900880 59900981 -43593993 + AT_rich Low_complexity Low_complexity 1 101 0 7 1042 765 211 137 0 chr15 59901124 59901314 -43593660 - B3 SINE B2 0 216 1 7 1042 281 346 48 0 chr15 59901332 59901436 -43593538 - PB1D10 SINE Alu -8 109 1 7 1042 549 0 0 0 chr15 59901445 59901506 -43593468 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 1042 1240 268 108 16 chr15 59904196 59904837 -43590137 - L1MC3 LINE L1 -36 7749 7050 7 1042 1187 258 84 32 chr15 59904839 59905184 -43589790 + ORR1D2 LTR MaLR 1 363 -7 7 1042 671 259 95 37 chr15 59905347 59905696 -43589278 - L1MC3 LINE L1 -1093 6692 6324 7 1042 501 285 78 62 chr15 59905759 59906022 -43588952 - L1MC LINE L1 -1774 4372 4106 7 1042 227 312 64 0 chr15 59906022 59906131 -43588843 + PB1D9 SINE Alu 4 119 -1 7 1042 501 285 78 62 chr15 59906131 59906417 -43588557 - L1MC LINE L1 -2041 4105 3814 7 1042 1866 143 75 18 chr15 59907191 59907489 -43587485 - Lx3A LINE L1 -7 6974 6657 7 1042 2969 76 2 12 chr15 59907489 59907889 -43587085 - MTA_Mm LTR MaLR 0 396 1 7 1042 1866 143 75 18 chr15 59907889 59907924 -43587050 - Lx3A LINE L1 -325 6656 6622 7 1042 227 396 99 21 chr15 59908768 59908910 -43586064 + MIRb SINE MIR 23 175 -93 7 1042 567 299 11 0 chr15 59909631 59909805 -43585169 - B3A SINE B2 -18 180 5 7 1042 218 359 101 17 chr15 59909870 59909989 -43584985 + MIRc SINE MIR 125 253 -15 7 1042 304 352 82 7 chr15 59910137 59910283 -43584691 - MIRb SINE MIR -43 225 69 7 1042 1122 286 15 11 chr15 59910364 59910633 -43584341 + B4 SINE B4 1 270 -22 7 1042 498 17 0 0 chr15 59910634 59910693 -43584281 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1042 202 288 181 9 chr15 59911992 59912097 -43582877 + L2a LINE L2 3302 3424 -2 7 1042 1150 61 6 12 chr15 59912719 59912884 -43582090 + (TTC)n Simple_repeat Simple_repeat 1 164 0 7 1042 410 289 82 34 chr15 59912884 59913031 -43581943 - RSINE1 SINE B4 -7 158 5 7 1042 574 198 0 70 chr15 59913763 59913877 -43581097 + RMER12 LTR ERVK 1217 1322 0 7 1042 250 317 0 0 chr15 59914064 59914124 -43580850 - ID4_ SINE ID -3 80 21 7 1042 469 276 38 45 chr15 59914139 59914272 -43580702 - B1F SINE Alu -5 144 13 7 1042 191 304 67 80 chr15 59914316 59914466 -43580508 + MIRb SINE MIR 75 222 -46 7 1042 1549 34 0 0 chr15 59914475 59914653 -43580321 - B2_Mm1a SINE B2 -14 179 2 7 1042 921 103 0 146 chr15 59914689 59914745 -43580229 - B1_Mus2 SINE Alu 0 147 116 7 1042 297 0 0 0 chr15 59914745 59914778 -43580196 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1042 921 103 0 146 chr15 59914778 59914892 -43580082 - B1_Mus2 SINE Alu -32 115 2 7 1042 187 333 43 0 chr15 59915385 59915454 -43579520 - MIR SINE MIR -71 191 120 7 1042 290 283 77 94 chr15 59916022 59916139 -43578835 - MER5A DNA MER1_type -1 188 74 7 1042 540 172 10 10 chr15 59916343 59916443 -43578531 + U6 snRNA snRNA 2 101 -6 7 1042 240 222 19 0 chr15 59916448 59916502 -43578472 + L1M3 LINE L1 5520 5574 -594 7 1042 685 273 7 0 chr15 59916505 59916655 -43578319 - B3A SINE B2 -37 161 11 7 1042 3888 66 2 0 chr15 59916677 59917163 -43577811 - L1_Mus1 LINE L1 0 6567 6081 7 1042 328 97 0 0 chr15 59917163 59917220 -43577754 + L1_Mus1 LINE L1 6030 6092 -492 7 1042 213 286 0 18 chr15 59917250 59917307 -43577667 - MER5B DNA MER1_type -91 87 32 7 1042 23 0 0 0 chr15 59918916 59918939 -43576035 + AT_rich Low_complexity Low_complexity 1 23 0 7 1042 742 307 75 12 chr15 59918977 59919218 -43575756 + B4A SINE B4 2 257 -35 7 1042 332 357 106 25 chr15 59919353 59919514 -43575460 + L1MEc LINE L1 285 458 -5942 7 1042 491 301 32 13 chr15 59919644 59919799 -43575175 - B4A SINE B4 -129 163 6 7 1042 507 39 39 0 chr15 59919969 59920047 -43574927 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 7 1042 364 263 190 35 chr15 59920300 59920442 -43574532 - RSINE1 SINE B4 -1 164 1 7 1042 21 57 0 0 chr15 59920549 59920584 -43574390 + AT_rich Low_complexity Low_complexity 1 35 0 7 1042 289 355 0 18 chr15 59920663 59920772 -43574202 + L4 LINE RTE 1742 1848 -181 7 1042 308 24 0 24 chr15 59922410 59922452 -43572522 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1042 261 0 0 0 chr15 59922472 59922501 -43572473 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 7 1042 242 326 68 68 chr15 59923055 59923186 -43571788 + MER3 DNA MER1_type 2 142 -67 7 1042 3703 129 38 25 chr15 59923186 59923792 -43571182 - Lx LINE L1 -14 6640 6027 7 1042 242 326 68 68 chr15 59923792 59923867 -43571107 + MER3 DNA MER1_type 143 208 -1 7 1042 2108 103 0 0 chr15 59923927 59924256 -43570718 + L1_Mm LINE L1 3440 3768 -2115 7 1042 359 188 12 0 chr15 59924256 59924341 -43570633 + Lx5 LINE L1 6965 7050 0 7 1042 554 123 0 0 chr15 59924632 59924713 -43570261 + Lx LINE L1 6027 6107 -547 7 1042 6935 67 21 11 chr15 59924714 59925682 -43569292 + L1_Mus1 LINE L1 5591 6567 0 7 1042 1846 215 5 16 chr15 59925681 59926063 -43568911 - Lx5 LINE L1 -72 6978 6601 7 1042 23 0 0 0 chr15 59926426 59926449 -43568525 + AT_rich Low_complexity Low_complexity 1 23 0 7 1042 544 295 51 23 chr15 59926461 59926676 -43568298 - Lx8 LINE L1 -12 7461 7241 7 1042 396 0 0 0 chr15 59927168 59927212 -43567762 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 1042 270 244 50 16 chr15 59927212 59927333 -43567641 + Lx9 LINE L1 7520 7644 0 7 1042 284 323 30 60 chr15 59927692 59927860 -43567114 - MIRb SINE MIR -85 183 21 7 1042 224 295 49 0 chr15 59928271 59928332 -43566642 - FLAM_A SINE Alu -222 73 10 7 1042 234 300 0 0 chr15 59928358 59928408 -43566566 + C-rich Low_complexity Low_complexity 1 50 0 7 1042 569 252 0 0 chr15 59928409 59928520 -43566454 - B1F SINE Alu -7 142 32 7 1042 281 281 67 52 chr15 59928428 59928563 -43566411 - MT2B LTR ERVL -322 279 143 7 1042 229 251 60 53 chr15 59929178 59929317 -43565657 + MER5B DNA MER1_type 1 175 -3 7 1042 186 417 0 0 chr15 59929476 59929536 -43565438 - L2b LINE L2 -8 3367 3308 7 1042 334 350 40 34 chr15 59931271 59931419 -43563555 - MER117 DNA MER1_type -27 170 22 7 1042 753 299 106 4 chr15 59933115 59933360 -43561614 + B4 SINE B4 1 270 -22 7 1042 567 0 0 0 chr15 59933393 59933456 -43561518 + (CA)n Simple_repeat Simple_repeat 2 64 0 7 1042 555 16 0 0 chr15 59933456 59933519 -43561455 + (GA)n Simple_repeat Simple_repeat 2 65 0 7 1042 211 383 11 49 chr15 59934021 59934205 -43560769 - MIR SINE MIR -5 257 81 7 1042 484 270 73 0 chr15 59934249 59934386 -43560588 - B1F SINE Alu -2 147 1 8 1042 249 359 39 8 chr15 59934509 59934638 -43560336 - MIRb SINE MIR -3 265 133 8 1042 232 323 50 43 chr15 59935025 59935164 -43559810 + MIRb SINE MIR 97 236 -32 8 1042 304 109 0 0 chr15 59935963 59936009 -43558965 - L1_Mus2 LINE L1 -111 6455 6410 8 1042 4713 98 7 16 chr15 59936046 59936722 -43558252 - L1_Mus4 LINE L1 -6 6630 5961 8 1042 665 297 67 46 chr15 59937399 59937681 -43557293 - B4A SINE B4 0 292 5 8 1042 415 331 127 0 chr15 59937808 59937965 -43557009 - MIRb SINE MIR -73 195 19 8 1042 237 180 0 0 chr15 59939462 59939512 -43555462 + CT-rich Low_complexity Low_complexity 6 55 0 8 1042 3380 61 71 11 chr15 59940942 59941390 -43553584 + MT2C_Mm LTR ERVL 1 475 0 8 1042 222 340 45 81 chr15 59943180 59943401 -43551573 + MIR SINE MIR 19 231 -31 8 1042 22 35 0 0 chr15 59943421 59943450 -43551524 + AT_rich Low_complexity Low_complexity 1 29 0 8 1042 1701 127 40 54 chr15 59943962 59944312 -43550662 + Lx2B LINE L1 5911 6255 -745 8 1042 621 363 60 36 chr15 59944446 59944510 -43550464 + Lx8 LINE L1 6432 6477 -1167 8 1042 1193 49 0 0 chr15 59944510 59944654 -43550320 + B1_Mus2 SINE Alu 1 144 -3 8 1042 315 0 0 0 chr15 59944654 59944689 -43550285 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 8 1042 1955 318 79 30 chr15 59944689 59945759 -43549215 + Lx8 LINE L1 6340 7473 0 8 1042 3502 227 51 25 chr15 59945834 59946692 -43548282 + Lx5 LINE L1 6143 7023 -27 8 1042 237 33 0 0 chr15 59946958 59946988 -43547986 + (T)n Simple_repeat Simple_repeat 1 30 0 8 1042 395 317 108 42 chr15 59947053 59947359 -43547615 + L1MC LINE L1 2850 3175 -2971 8 1042 546 16 0 0 chr15 59947378 59947441 -43547533 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 8 1042 7065 60 18 20 chr15 59947441 59948559 -43546415 - L1_Mus2 LINE L1 -6 6560 5449 8 1042 801 136 27 0 chr15 59948568 59948715 -43546259 + L1_Mm LINE L1 4311 4461 -1422 8 1042 2053 91 15 64 chr15 59948715 59949043 -43545931 + L1_Mus2 LINE L1 6249 6560 -6 8 1042 411 73 0 0 chr15 59949043 59949098 -43545876 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 8 1042 395 317 108 42 chr15 59949117 59949423 -43545551 - L1MC LINE L1 -2971 3175 2850 8 1042 238 293 163 15 chr15 59950227 59950362 -43544612 - RMER15 LTR ERVL -15 560 406 8 1042 257 237 71 10 chr15 59950502 59950600 -43544374 - Lx8 LINE L1 -342 7131 7028 8 1042 6141 56 0 1 chr15 59952158 59952926 -43542048 - L1Md_F2 LINE L1 -2 6580 5814 8 1042 457 29 0 93 chr15 59953234 59953309 -43541665 + L1_Mus1 LINE L1 6500 6567 0 8 1042 21 0 0 0 chr15 59953382 59953403 -43541571 + AT_rich Low_complexity Low_complexity 1 21 0 8 1042 405 109 0 0 chr15 59953634 59953698 -43541276 + (CA)n Simple_repeat Simple_repeat 1 64 0 8 1042 431 301 19 58 chr15 59953816 59953971 -43541003 - MER20 DNA MER1_type -8 211 63 8 1042 276 130 0 0 chr15 59954897 59954943 -43540031 + (T)n Simple_repeat Simple_repeat 1 46 0 8 1042 852 156 35 7 chr15 59955108 59955250 -43539724 + B1_Mus1 SINE Alu 3 148 0 8 1042 302 67 22 0 chr15 59955264 59955309 -43539665 + (CAA)n Simple_repeat Simple_repeat 1 46 0 8 1042 203 238 46 31 chr15 59955840 59955905 -43539069 - L2a LINE L2 -1 3386 3321 8 1042 333 0 0 0 chr15 59956090 59956127 -43538847 + (GA)n Simple_repeat Simple_repeat 2 38 0 8 1042 298 344 126 82 chr15 59956156 59956473 -43538501 - MER92A LTR ERV1 -1 411 81 8 1042 210 345 22 11 chr15 59956646 59956737 -43538237 - L2a LINE L2 -303 3123 3032 8 1042 249 373 52 65 chr15 59956776 59957224 -43537750 + MLT1H LTR MaLR 17 447 -132 8 1042 1221 106 0 0 chr15 59957335 59957515 -43537459 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 8 1042 482 173 10 0 chr15 59957515 59957619 -43537355 + GA-rich Low_complexity Low_complexity 1 105 0 8 1042 221 317 31 39 chr15 59957898 59958026 -43536948 - L2a LINE L2 -1037 2382 2256 8 1042 213 282 179 0 chr15 59958308 59958386 -43536588 - L2a LINE L2 -24 3402 3311 8 1042 2942 44 0 0 chr15 59958389 59958755 -43536219 - L1_Mm LINE L1 -145 5738 5373 8 1042 7622 36 4 7 chr15 59958837 59959764 -43535210 + L1Md_F2 LINE L1 5657 6581 -1 8 1042 335 282 45 22 chr15 59960202 59960380 -43534594 + L1M2 LINE L1 5190 5371 -772 8 1042 682 300 127 11 chr15 59960375 59960752 -43534222 + Lx8 LINE L1 6723 7143 -330 8 1042 609 318 50 13 chr15 59960816 59961116 -43533858 - Lx8 LINE L1 -456 7017 6707 8 1042 542 318 83 21 chr15 59961140 59961743 -43533231 + L1M2 LINE L1 4765 5417 -463 8 1042 643 260 0 0 chr15 59961743 59961870 -43533104 + B1_Mur1 SINE Alu 1 127 -22 8 1042 212 59 29 0 chr15 59961881 59961915 -43533059 + (CAA)n Simple_repeat Simple_repeat 2 36 0 8 1042 1191 264 71 29 chr15 59961915 59962367 -43532607 + Lx8 LINE L1 5364 5834 -13 8 1042 515 352 59 18 chr15 59962369 59962707 -43532267 + Lx8 LINE L1 6191 6542 -931 8 1042 293 68 23 0 chr15 59963591 59963635 -43531339 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 1042 1037 84 35 0 chr15 59964948 59965090 -43529884 - B1_Mus1 SINE Alu -1 147 1 8 1042 226 237 51 0 chr15 59965262 59965321 -43529653 - MER5C1 DNA MER1_type -52 211 150 8 1042 2199 131 50 25 chr15 59965418 59965817 -43529157 + RLTR9E LTR ERVK 1 409 0 8 1042 685 330 94 101 chr15 59966844 59966955 -43528019 - MER34A1 LTR ERV1 -7 580 466 8 1042 387 56 0 0 chr15 59966955 59967009 -43527965 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 1042 685 330 94 101 chr15 59967009 59967481 -43527493 - MER34A1 LTR ERV1 -122 465 1 8 1042 1137 74 0 13 chr15 59967808 59967946 -43527028 + B1_Mus1 SINE Alu 1 138 -10 8 1042 324 0 0 0 chr15 59967946 59967982 -43526992 + (CAA)n Simple_repeat Simple_repeat 2 37 0 8 1042 1137 74 0 13 chr15 59967982 59967993 -43526981 + B1_Mus1 SINE Alu 139 148 0 8 1042 193 301 167 31 chr15 59968019 59968211 -43526763 + MIR SINE MIR 4 221 -41 8 1042 505 346 11 16 chr15 59968486 59968668 -43526306 + MIRb SINE MIR 70 250 -18 8 1042 714 86 0 0 chr15 59969322 59969438 -43525536 + (TC)n Simple_repeat Simple_repeat 2 117 0 8 1042 352 295 62 54 chr15 59970803 59970932 -43524042 + LTR16C LTR ERVL 357 486 -3 8 1042 182 327 0 0 chr15 59971732 59971784 -43523190 - L2c LINE L2 0 3387 3336 8 1042 390 325 116 64 chr15 59972014 59972264 -43522710 - MTEa LTR MaLR -116 263 1 8 1042 360 94 0 0 chr15 59972714 59972767 -43522207 + (TG)n Simple_repeat Simple_repeat 1 53 0 8 1042 423 317 50 0 chr15 59972768 59972888 -43522086 - RSINE1 SINE B4 -37 128 3 8 1042 22 35 0 0 chr15 59972910 59972939 -43522035 + AT_rich Low_complexity Low_complexity 1 29 0 8 1042 438 146 10 20 chr15 59972973 59973071 -43521903 + GA-rich Low_complexity Low_complexity 2 98 0 8 1042 354 216 57 0 chr15 59973161 59973249 -43521725 + B1F2 SINE Alu 14 106 -43 8 1042 34 0 0 0 chr15 59973776 59973810 -43521164 + AT_rich Low_complexity Low_complexity 1 34 0 8 1042 348 64 0 0 chr15 59974047 59974094 -43520880 + (TA)n Simple_repeat Simple_repeat 1 47 0 8 1042 297 128 0 0 chr15 59974186 59974233 -43520741 + (TTCA)n Simple_repeat Simple_repeat 2 48 0 8 1042 21 0 0 0 chr15 59974891 59974912 -43520062 + AT_rich Low_complexity Low_complexity 1 21 0 8 1042 660 143 71 0 chr15 59974919 59975059 -43519915 - Lx3A LINE L1 -12 6969 6820 8 1042 239 209 0 0 chr15 59975059 59975126 -43519848 - Lx3A LINE L1 0 6654 6588 8 1042 2450 103 3 0 chr15 59975120 59975500 -43519474 + MusHAL1 LINE L1 445 825 -1887 8 1042 3408 113 5 7 chr15 59975496 59976552 -43518422 - L1VL4 LINE L1 -2180 1637 578 8 1042 7223 116 46 9 chr15 59976611 59978352 -43516622 - Lx3B LINE L1 -138 6835 5032 8 1042 276 30 0 0 chr15 59979449 59979482 -43515492 + (ATG)n Simple_repeat Simple_repeat 3 35 0 8 1042 950 92 14 0 chr15 59979836 59979978 -43514996 + (TTTC)n Simple_repeat Simple_repeat 4 147 0 8 1042 804 215 0 0 chr15 59980491 59980759 -43514215 + GA-rich Low_complexity Low_complexity 1 268 0 8 1042 210 222 0 0 chr15 59980759 59980795 -43514179 + polypurine Low_complexity Low_complexity 1 36 0 8 1042 710 166 17 28 chr15 59980797 59980977 -43513997 + GA-rich Low_complexity Low_complexity 3 180 0 8 1042 967 117 0 32 chr15 59980983 59981169 -43513805 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 8 1042 183 222 0 0 chr15 59981176 59981221 -43513753 + GA-rich Low_complexity Low_complexity 33 77 0 8 1042 273 178 0 43 chr15 59982212 59982259 -43512715 + URR1B DNA MER1_type 1 45 -180 8 1042 189 94 0 0 chr15 59982688 59982720 -43512254 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 8 1042 486 136 0 0 chr15 59983302 59983383 -43511591 + (CA)n Simple_repeat Simple_repeat 1 81 0 8 1042 666 97 0 0 chr15 59983383 59983496 -43511478 + (TCTA)n Simple_repeat Simple_repeat 1 113 0 8 1042 249 98 0 0 chr15 59983813 59983854 -43511120 + (T)n Simple_repeat Simple_repeat 1 41 0 8 1042 252 0 0 0 chr15 59984386 59984414 -43510560 + (TTC)n Simple_repeat Simple_repeat 1 28 0 8 1042 34177 67 6 6 chr15 59984414 59990534 -43504440 - L1Md_F3 LINE L1 -14 6570 452 8 1042 471 78 0 0 chr15 59990949 59991013 -43503961 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 8 1042 418 295 25 67 chr15 59991967 59992087 -43502887 - RSINE1 SINE B4 -47 118 4 8 1042 8934 58 1 230 chr15 59992145 59994183 -43500791 + L1Md_F2 LINE L1 4017 5586 -297 8 1042 7464 56 35 6 chr15 59994184 59995139 -43499835 + L1Md_F2 LINE L1 5588 6569 -13 8 1042 265 327 93 9 chr15 59995746 59995854 -43499120 + PB1D10 SINE Alu 1 117 -10 8 1042 375 312 59 0 chr15 59995932 59996102 -43498872 + Lx8 LINE L1 6919 7098 -375 8 1042 23 0 0 0 chr15 59996106 59996129 -43498845 + AT_rich Low_complexity Low_complexity 1 23 0 8 1042 266 254 13 90 chr15 59996524 59996602 -43498372 + MER31B LTR ERV1 5 76 -390 8 1042 3422 234 82 14 chr15 59996778 59997636 -43497338 - Lx5 LINE L1 -7 7043 6128 8 1042 1474 162 8 0 chr15 59997970 59998223 -43496751 - Lx2A1 LINE L1 -5 7003 6749 8 1042 5649 126 8 16 chr15 59998579 59999540 -43495434 + L1VL2 LINE L1 120 1067 -2548 9 1042 1224 57 6 0 chr15 59999540 59999699 -43495275 - L1_Mus1 LINE L1 0 6567 6408 9 1042 2653 93 2 68 chr15 59999699 60000000 -43494974 + L1VL2 LINE L1 1068 1355 -2260 9 1042 20873 137 11 2 chr15 60000002 60003620 -43491354 + L1Md_F3 LINE L1 1657 5306 -577 1 1042 32605 73 3 4 chr15 60003607 60009029 -43485945 + L1Md_F3 LINE L1 238 5585 -298 1 1042 7974 43 14 0 chr15 60009030 60010014 -43484960 + L1Md_F3 LINE L1 5587 6584 0 1 1042 3534 109 8 0 chr15 60010025 60010715 -43484259 + L1_Mus3 LINE L1 5288 5985 -653 2 1042 1270 109 16 0 chr15 60010709 60010901 -43484073 + L1_Mus3 LINE L1 6123 6317 -319 2 1042 258 359 57 20 chr15 60011794 60012095 -43482879 - MER31-int LTR ERV1 -746 4190 3879 3 1042 25182 16 1 0 chr15 60012273 60015327 -43479647 + L1Md_A LINE L1 2531 5586 -297 4 1042 8837 14 0 0 chr15 60015328 60016323 -43478651 + L1Md_A LINE L1 5588 6582 0 4 1042 996 285 49 88 chr15 60017183 60017914 -43477060 - MER31-int LTR ERV1 -3490 1446 744 3 1042 984 204 31 129 chr15 60019054 60019410 -43475564 + RLTRETN_Mm LTR ERVK 1 409 0 5 1042 257 0 30 0 chr15 60020008 60020041 -43474933 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 6 1042 189 107 0 0 chr15 60020152 60020180 -43474794 + (TATG)n Simple_repeat Simple_repeat 1 28 0 7 1042 7019 106 93 7 chr15 60021218 60022313 -43472661 + Lx3A LINE L1 5782 6970 -11 8 1042 271 300 129 32 chr15 60022776 60022890 -43472084 + MER89 LTR ERV1 213 338 -221 9 1042 659 299 117 96 chr15 60022890 60023128 -43471846 - MTD LTR MaLR 0 419 165 1 1042 1091 72 0 0 chr15 60023128 60023266 -43471708 - B1_Mm SINE Alu -9 138 1 1 1042 659 299 117 96 chr15 60023266 60023404 -43471570 - MTD LTR MaLR -255 164 35 1 1042 248 382 52 26 chr15 60023399 60023590 -43471384 + MER89 LTR ERV1 326 521 -38 9 1042 6469 36 5 3 chr15 60023883 60024665 -43470309 + L1Md_F2 LINE L1 5796 6579 -3 1 1042 399 359 52 12 chr15 60024710 60024961 -43470013 + MER89-int LTR ERV1 3140 3400 -3401 1 1042 207 0 0 0 chr15 60025374 60025397 -43469577 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1042 250 390 88 4 chr15 60025970 60026220 -43468754 + MER89-int LTR ERV1 4542 4812 -1989 1 1042 230 265 29 0 chr15 60026257 60026325 -43468649 - Lx8 LINE L1 -5 7468 7399 1 1042 1604 220 49 10 chr15 60026359 60026745 -43468229 + Lx9 LINE L1 6998 7398 -246 1 1042 325 236 14 0 chr15 60026761 60026833 -43468141 - Lx8 LINE L1 -137 7336 7264 1 1042 269 333 84 19 chr15 60026851 60027065 -43467909 + MER89-int LTR ERV1 4855 5082 -1719 1 1042 772 288 30 15 chr15 60027346 60027614 -43467360 + MER89-int LTR ERV1 5587 5858 -943 1 1042 240 283 0 0 chr15 60027968 60028028 -43466946 + MER92B LTR ERV1 1 60 -576 1 1042 5014 65 0 0 chr15 60028028 60028694 -43466280 + L1Md_F2 LINE L1 4921 5586 -297 1 1042 7254 44 77 7 chr15 60028694 60029624 -43465350 + L1Md_F2 LINE L1 5587 6582 0 1 1042 542 333 7 29 chr15 60029690 60029826 -43465148 - RSINE1 SINE B4 0 165 33 1 1042 790 262 102 40 chr15 60029889 60030389 -43464585 + L1_Mur3 LINE L1 3073 3603 -2277 2 1042 2031 110 32 0 chr15 60030404 60030712 -43464262 - L1_Mus3 LINE L1 -1 6637 6320 2 130 3178 75 103 0 chr15 60030712 60031189 -43463785 + L1_Mus3 LINE L1 5809 6334 -304 2 1043 1154 292 40 50 chr15 60031216 60031822 -43463152 + L1_Mur3 LINE L1 3622 4221 -1659 2 1043 24280 17 0 0 chr15 60031855 60035528 -43459446 - L1Md_T LINE L1 0 6582 2909 2 1043 549 207 126 0 chr15 60035533 60035644 -43459330 + B1_Mus1 SINE Alu 15 139 -9 2 1043 243 0 0 0 chr15 60035644 60035671 -43459303 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2 1043 661 296 0 0 chr15 60035746 60035918 -43459056 - Lx8 LINE L1 -670 6803 6632 2 1043 596 265 188 5 chr15 60035924 60036148 -43458826 - Lx8 LINE L1 -493 6980 6716 2 1043 196 149 21 21 chr15 60036384 60036432 -43458542 + GA-rich Low_complexity Low_complexity 3 50 0 2 1043 930 312 112 20 chr15 60036825 60037280 -43457694 + Lx8 LINE L1 6832 7328 -145 2 1043 234 323 0 0 chr15 60037421 60037483 -43457491 + ID4 SINE ID 2 63 -20 2 1043 705 334 53 18 chr15 60037657 60038258 -43456716 + L1MB7 LINE L1 5372 5993 -191 3 1043 465 359 51 47 chr15 60038645 60038920 -43456054 - MLT1H LTR MaLR -206 343 68 3 1043 1052 281 100 3 chr15 60039425 60039735 -43455239 - MTD LTR MaLR -1 418 68 3 1043 858 198 26 42 chr15 60039740 60039930 -43455044 - B2_Mm2 SINE B2 -8 187 1 3 1043 1484 248 134 54 chr15 60040014 60040589 -43454385 - MTC-int LTR MaLR -4 1254 634 3 1043 5355 152 46 11 chr15 60040642 60040757 -43454217 - Lx2 LINE L1 -1 6996 6883 3 1043 180 0 0 0 chr15 60040757 60040777 -43454197 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 3 1043 5355 152 46 11 chr15 60040777 60041541 -43453433 - Lx2 LINE L1 -115 6882 6080 3 1043 2955 62 39 13 chr15 60041541 60041931 -43453043 + MTB LTR MaLR 1 400 0 3 1043 5355 152 46 11 chr15 60041931 60042035 -43452939 - Lx2 LINE L1 -918 6079 5980 3 1043 651 244 15 0 chr15 60042502 60042633 -43452341 - ETnERV2-int LTR ERVK -204 7202 7070 3 1043 989 317 20 43 chr15 60042652 60042873 -43452101 + L1_Mur3 LINE L1 5140 5350 -530 3 1043 2423 179 2 32 chr15 60042873 60043370 -43451604 + Lx LINE L1 6171 6652 -2 4 1043 989 317 20 43 chr15 60043370 60043688 -43451286 + L1_Mur3 LINE L1 5351 5667 -213 3 1043 22 35 0 0 chr15 60043749 60043778 -43451196 + AT_rich Low_complexity Low_complexity 1 29 0 4 1043 358 248 197 0 chr15 60043842 60043979 -43450995 + Charlie5 DNA MER1_type 37 200 -2424 4 1043 556 245 143 29 chr15 60043977 60044100 -43450874 + Charlie5 DNA MER1_type 2352 2492 -132 4 1043 447 92 0 0 chr15 60044100 60044165 -43450809 + (TA)n Simple_repeat Simple_repeat 1 65 0 4 1043 556 245 143 29 chr15 60044165 60044285 -43450689 + Charlie5 DNA MER1_type 2493 2623 -1 4 1043 192 288 67 27 chr15 60045002 60045077 -43449897 - L2 LINE L2 -808 2611 2534 4 1043 269 333 70 0 chr15 60045597 60045711 -43449263 + MIR SINE MIR 87 208 -54 4 1043 247 384 103 36 chr15 60045715 60046045 -43448929 - ORR1E LTR MaLR 0 359 8 4 1043 348 344 8 0 chr15 60046607 60046729 -43448245 + Lx8 LINE L1 7130 7252 -221 4 1043 225 98 173 19 chr15 60047157 60047209 -43447765 + Charlie12 DNA MER1_type 1667 1726 -1147 4 1043 237 294 29 0 chr15 60047224 60047292 -43447682 - MER5A DNA MER1_type -81 108 39 4 1043 193 349 133 38 chr15 60047369 60047527 -43447447 - MIR SINE MIR -82 180 8 5 1043 1642 245 49 8 chr15 60049406 60049793 -43445181 + MTD LTR MaLR 1 403 -16 5 1043 1541 246 68 8 chr15 60049827 60050224 -43444750 + MTC LTR MaLR 1 421 0 5 1043 1857 134 73 179 chr15 60050280 60050661 -43444313 - RLTR23 LTR ERV1 0 430 107 5 1043 1090 117 0 11 chr15 60050661 60050842 -43444132 + (TTC)n Simple_repeat Simple_repeat 1 179 0 5 1043 1857 134 73 179 chr15 60050842 60050941 -43444033 - RLTR23 LTR ERV1 -324 106 1 5 1043 435 72 0 0 chr15 60051073 60051138 -43443836 - L1_Mus1 LINE L1 -672 5910 5846 5 1043 2035 29 0 16 chr15 60051138 60051387 -43443587 + L1_Mus1 LINE L1 6321 6565 -2 5 1043 1258 203 28 39 chr15 60052522 60052806 -43442168 + ORR1C2 LTR MaLR 4 287 -72 5 1043 302 340 40 0 chr15 60052816 60052916 -43442058 - L1MC3 LINE L1 -980 6805 6702 5 1043 902 308 57 62 chr15 60053684 60054055 -43440919 + MLT1B LTR MaLR 20 388 -2 5 1043 180 125 0 0 chr15 60054587 60054619 -43440355 + (A)n Simple_repeat Simple_repeat 1 32 0 6 1043 293 312 95 14 chr15 60054873 60055047 -43439927 + MIR SINE MIR 45 224 -44 6 1043 21 0 0 0 chr15 60055727 60055748 -43439226 + AT_rich Low_complexity Low_complexity 1 21 0 6 1043 203 263 96 63 chr15 60055815 60055926 -43439048 - L2a LINE L2 -9 3417 3269 6 1043 610 334 83 65 chr15 60056134 60056579 -43438395 - MLT1C LTR MaLR 0 467 15 6 1043 21 0 0 0 chr15 60056895 60056916 -43438058 + AT_rich Low_complexity Low_complexity 1 21 0 6 1043 250 319 35 17 chr15 60057598 60057713 -43437261 - PB1D10 SINE Alu 0 117 1 6 1043 443 301 90 0 chr15 60057713 60057764 -43437210 - ID SINE ID -140 84 22 6 1043 491 297 73 99 chr15 60058023 60058296 -43436678 + LTR80B LTR ERVL 71 336 -248 6 1043 875 338 116 23 chr15 60058537 60058934 -43436040 + MER70A LTR ERVL 39 472 0 6 1043 551 15 0 14 chr15 60059778 60059847 -43435127 + (TA)n Simple_repeat Simple_repeat 2 69 0 7 1043 432 0 0 0 chr15 60060721 60060769 -43434205 + (TC)n Simple_repeat Simple_repeat 2 49 0 7 1043 501 17 0 0 chr15 60060769 60060826 -43434148 + (TG)n Simple_repeat Simple_repeat 1 58 0 7 1043 704 295 84 20 chr15 60060847 60061096 -43433878 - B4A SINE B4 -27 265 1 7 1043 693 284 178 5 chr15 60061096 60061281 -43433693 - B4 SINE B4 -62 230 11 7 1043 228 100 0 0 chr15 60062866 60062906 -43432068 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1043 4553 192 48 8 chr15 60063025 60063948 -43431026 - Lx5 LINE L1 -3 7047 6088 7 1043 23 0 0 0 chr15 60064054 60064077 -43430897 + AT_rich Low_complexity Low_complexity 1 23 0 7 1043 252 59 0 0 chr15 60064177 60064211 -43430763 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 7 1043 23 0 0 0 chr15 60064221 60064244 -43430730 + AT_rich Low_complexity Low_complexity 1 23 0 7 1043 36346 41 0 2 chr15 60064259 60070475 -43424499 - L1Md_T LINE L1 0 6585 288 8 1043 232 228 0 66 chr15 60070601 60070662 -43424312 + MIR SINE MIR 81 137 -71 8 1043 530 289 237 13 chr15 60070747 60070975 -43423999 + B4A SINE B4 2 280 -12 8 1043 195 139 0 0 chr15 60070997 60071033 -43423941 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 1043 634 328 133 63 chr15 60071040 60071467 -43423507 + MLT1D LTR MaLR 21 477 -28 8 1043 32 0 0 0 chr15 60071642 60071674 -43423300 + AT_rich Low_complexity Low_complexity 1 32 0 8 1043 315 288 83 30 chr15 60072106 60072438 -43422536 + L1M5 LINE L1 5255 5611 -562 8 1043 26 50 0 0 chr15 60072691 60072731 -43422243 + AT_rich Low_complexity Low_complexity 1 40 0 8 1043 228 356 125 0 chr15 60073743 60073847 -43421127 + MIR SINE MIR 10 126 -136 8 1043 420 181 0 0 chr15 60073847 60073930 -43421044 + T-rich Low_complexity Low_complexity 1 83 0 8 1043 1175 54 7 0 chr15 60073930 60074077 -43420897 - B1_Mus1 SINE Alu 0 148 1 9 1043 458 101 36 48 chr15 60074754 60074837 -43420137 + B2_Mm2 SINE B2 113 194 -1 9 1043 1686 231 140 36 chr15 60074838 60075506 -43419468 - Lx6 LINE L1 -21 7439 6702 9 1043 311 61 41 0 chr15 60075830 60075879 -43419095 + (TCCA)n Simple_repeat Simple_repeat 2 52 0 9 1043 1334 246 122 9 chr15 60075947 60076275 -43418699 + ORR1D2 LTR MaLR 1 365 -5 9 1043 953 235 51 0 chr15 60076280 60076497 -43418477 + ORR1D2-int LTR MaLR 1 228 -1142 9 1043 374 79 16 0 chr15 60076499 60076562 -43418412 + (TG)n Simple_repeat Simple_repeat 1 64 0 9 1043 287 320 40 10 chr15 60076768 60076869 -43418105 - B4 SINE B4 -187 105 2 9 1043 322 335 72 62 chr15 60076869 60077063 -43417911 + L1M5 LINE L1 4718 4913 -1233 9 1043 232 276 17 0 chr15 60077922 60077980 -43416994 - MER45A DNA Tip100 -20 158 100 9 1043 585 100 0 0 chr15 60078235 60078325 -43416649 + (TG)n Simple_repeat Simple_repeat 2 91 0 9 1043 1611 50 0 0 chr15 60078411 60078612 -43416362 - L1_Mus1 LINE L1 0 6567 6367 1 1043 2185 311 52 26 chr15 60078615 60079561 -43415413 + Lx8 LINE L1 6282 7253 -220 1 1043 1118 68 0 13 chr15 60079561 60079698 -43415276 + B1_Mus1 SINE Alu 2 138 -10 1 1043 279 0 0 0 chr15 60079698 60079729 -43415245 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1043 1118 68 0 13 chr15 60079729 60079740 -43415234 + B1_Mus1 SINE Alu 139 148 0 1 1043 2185 311 52 26 chr15 60079740 60079823 -43415151 + Lx8 LINE L1 7254 7338 -135 1 1043 537 244 62 34 chr15 60079838 60080046 -43414928 + Lx6 LINE L1 7245 7458 -2 1 1043 198 0 0 0 chr15 60080293 60080315 -43414659 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1 1043 526 304 96 63 chr15 60081126 60081428 -43413546 - LTR52 LTR ERVL -69 352 41 1 1043 21 0 0 0 chr15 60081973 60081994 -43412980 + AT_rich Low_complexity Low_complexity 1 21 0 1 1043 287 166 139 5 chr15 60082111 60082305 -43412669 + RMER17A2 LTR ERVK 270 489 -417 1 1043 201 121 0 0 chr15 60082305 60082338 -43412636 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 1043 3163 300 36 11 chr15 60082967 60084169 -43410805 + Lx7 LINE L1 6045 7308 -388 1 1043 1357 223 31 0 chr15 60084180 60084440 -43410534 - MTD LTR MaLR -151 268 1 1 1043 1990 91 0 0 chr15 60084702 60084987 -43409987 - L1_Mus1 LINE L1 -242 6325 6041 1 1043 1619 65 23 0 chr15 60084989 60085204 -43409770 + L1_Mus1 LINE L1 6347 6566 -1 1 1043 804 115 0 0 chr15 60085244 60085366 -43409608 + (GAAA)n Simple_repeat Simple_repeat 1 122 0 1 1043 278 334 68 26 chr15 60085701 60085922 -43409052 - MIR SINE MIR -11 257 21 1 1043 199 342 35 43 chr15 60086398 60086514 -43408460 - MIR3 SINE MIR -35 173 59 1 1043 1848 203 25 60 chr15 60086885 60087283 -43407691 - ORR1C2 LTR MaLR 0 384 1 1 1043 263 290 0 28 chr15 60087668 60087739 -43407235 - MLT1I LTR MaLR -267 144 76 1 1043 192 303 152 0 chr15 60087945 60088011 -43406963 - MIRb SINE MIR -98 170 95 1 1043 742 177 37 31 chr15 60088042 60088205 -43406769 + Lx9 LINE L1 7291 7454 -190 1 1043 297 0 0 0 chr15 60088210 60088243 -43406731 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1043 288 0 0 0 chr15 60088243 60088274 -43406700 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 1043 319 157 157 0 chr15 60088287 60088389 -43406585 + Lx9 LINE L1 7527 7644 0 1 1043 203 207 35 0 chr15 60088958 60089016 -43405958 + (CACG)n Simple_repeat Simple_repeat 2 61 0 1 1043 314 94 37 19 chr15 60089016 60089050 -43405924 + HAL1-3A_ME LINE L1 1976 2009 -849 1 1043 579 29 0 0 chr15 60089050 60089119 -43405855 + (GA)n Simple_repeat Simple_repeat 2 70 0 1 1043 314 94 37 19 chr15 60089119 60089138 -43405836 + HAL1-3A_ME LINE L1 2010 2030 -828 1 1043 941 203 126 23 chr15 60090234 60090496 -43404478 + Lx6 LINE L1 7146 7434 -26 1 1043 189 74 0 0 chr15 60090918 60090945 -43404029 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1043 777 22 0 0 chr15 60090945 60091035 -43403939 + (GA)n Simple_repeat Simple_repeat 2 92 0 1 1043 283 313 260 0 chr15 60091591 60091757 -43403217 - MER20 DNA MER1_type -10 209 1 1 1043 5377 69 10 8 chr15 60091924 60092676 -43402298 + L1_Mus3 LINE L1 5924 6638 0 1 1043 302 328 7 56 chr15 60093823 60093965 -43401009 + MIRb SINE MIR 83 217 -51 1 1043 1246 295 87 8 chr15 60093996 60094751 -43400223 - ERVL-int LTR ERVL -3250 2507 1630 1 1043 529 148 0 0 chr15 60094807 60094895 -43400079 + B3 SINE B2 129 216 0 1 1043 3138 51 8 0 chr15 60095133 60095523 -43399451 + L1_Mus1 LINE L1 6175 6567 0 1 1043 221 0 0 33 chr15 60095592 60095622 -43399352 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1043 1297 221 50 48 chr15 60095918 60096266 -43398708 + ORR1C2 LTR MaLR 36 384 0 1 1043 244 319 0 0 chr15 60096604 60096676 -43398298 - MLT2B2 LTR ERVL -406 109 38 1 1043 867 181 0 0 chr15 60096731 60096869 -43398105 - B1_Mur3 SINE Alu -7 142 5 1 1043 200 346 48 24 chr15 60098110 60098193 -43396781 + MIRb SINE MIR 65 149 -119 1 1043 520 314 73 45 chr15 60098323 60098500 -43396474 - B3A SINE B2 -6 192 11 1 1043 5734 61 0 1 chr15 60098555 60099265 -43395709 - L1_Mus2 LINE L1 -1 6565 5857 1 1043 1591 106 0 59 chr15 60099363 60099634 -43395340 + L1Md_F2 LINE L1 6328 6582 0 1 1043 2580 238 76 6 chr15 60100318 60100996 -43393978 - Lx6 LINE L1 0 7460 6418 1 1043 415 249 136 0 chr15 60102068 60102237 -43392737 - Lx6 LINE L1 -714 6746 6555 1 1043 243 314 57 0 chr15 60102668 60102738 -43392236 + ID4_ SINE ID 2 75 -8 1 1043 1173 217 75 83 chr15 60103029 60103459 -43391515 - RLTR26 LTR ERVK -168 474 15 1 1043 2245 168 13 0 chr15 60103462 60103843 -43391131 - MERVK26-int LTR ERVK -7 6912 6527 1 1043 258 105 0 0 chr15 60103879 60103917 -43391057 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 1 1043 351 0 0 0 chr15 60104040 60104079 -43390895 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1043 433 275 117 0 chr15 60105706 60105826 -43389148 + B1F SINE Alu 2 135 -14 1 1043 234 325 0 9 chr15 60106074 60106189 -43388785 - L1MA9 LINE L1 -341 5971 5858 1 1043 1426 312 61 22 chr15 60106236 60106795 -43388179 - Lx8 LINE L1 -17 7456 6863 1 1043 270 81 0 0 chr15 60106795 60106832 -43388142 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 1 1043 1426 312 61 22 chr15 60106832 60106960 -43388014 - Lx8 LINE L1 -611 6862 6742 1 1043 660 320 77 52 chr15 60107152 60107522 -43387452 - MTE2a LTR MaLR 0 379 1 1 1043 386 348 119 37 chr15 60108298 60108567 -43386407 - L1M4b LINE L1 -6397 937 647 1 1043 332 378 160 35 chr15 60108699 60109075 -43385899 - L1M4b LINE L1 -6870 464 42 1 1043 679 297 70 16 chr15 60109869 60110112 -43384862 + MLT1C LTR MaLR 39 294 -173 1 1043 286 318 14 79 chr15 60110126 60110266 -43384708 + MLT1C LTR MaLR 337 467 0 1 1043 234 348 43 0 chr15 60110866 60110958 -43384016 - Tigger5 DNA MER2_type 0 2406 2311 1 1043 497 363 44 9 chr15 60110973 60111198 -43383776 - Tigger5 DNA MER2_type -2168 238 6 1 1043 276 77 0 0 chr15 60111814 60111853 -43383121 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1043 328 341 22 34 chr15 60113619 60113798 -43381176 + MIR SINE MIR 68 244 -18 1 1043 892 304 75 43 chr15 60114029 60114427 -43380547 - MTD LTR MaLR 0 419 9 1 1043 343 322 39 32 chr15 60114650 60114804 -43380170 + MIR SINE MIR 44 198 -64 1 1043 194 0 39 0 chr15 60115948 60115974 -43379000 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1 1043 200 180 60 0 chr15 60116100 60116150 -43378824 + G-rich Low_complexity Low_complexity 4 56 0 1 1043 1882 22 5 0 chr15 60116301 60116524 -43378450 + MTA_Mm LTR MaLR 119 342 -54 1 1043 813 232 58 50 chr15 60117241 60117518 -43377456 - RLTR12B LTR ERVK -10 518 240 1 1043 797 268 39 46 chr15 60117500 60117785 -43377189 - RLTR12B LTR ERVK -199 329 47 1 1043 1046 199 14 36 chr15 60118144 60118363 -43376611 - URR1B DNA MER1_type -11 214 1 1 1043 1781 231 95 78 chr15 60120780 60121381 -43373593 - RMER19C LTR ERVK 0 611 1 1 1043 730 318 35 10 chr15 60121508 60121797 -43373177 + MERVK26-int LTR ERVK 6311 6606 -313 1 1043 718 275 68 3 chr15 60122866 60123131 -43371843 - L1_Mur3 LINE L1 -2131 4012 3671 1 1043 589 310 92 28 chr15 60123318 60123786 -43371188 - L1M5 LINE L1 -677 5767 5270 1 1043 360 308 97 95 chr15 60124123 60124675 -43370299 - L1MEf LINE L1 -4588 1612 1061 1 1043 288 52 50 33 chr15 60124889 60124949 -43370025 - L1Md_F2 LINE L1 0 6582 6522 1 1043 591 174 0 0 chr15 60125356 60125448 -43369526 + B1_Mus1 SINE Alu 1 92 -56 1 1043 442 313 52 167 chr15 60125848 60126404 -43368570 - MLT1D LTR MaLR -2 503 12 1 1043 180 152 0 0 chr15 60127345 60127378 -43367596 + CT-rich Low_complexity Low_complexity 1 33 0 1 1043 1546 50 61 0 chr15 60127849 60128047 -43366927 - L1Md_F3 LINE L1 -3 6581 6372 1 1043 3313 63 5 10 chr15 60128032 60128431 -43366543 - L1_Mus1 LINE L1 0 6567 6171 1 1043 2212 78 3 3 chr15 60128776 60129061 -43365913 - L1_Mus2 LINE L1 -1 6565 6281 1 1043 726 24 0 0 chr15 60129061 60129145 -43365829 + L1_Mus2 LINE L1 6204 6287 -279 1 1043 288 231 0 49 chr15 60130533 60130615 -43364359 - MTEa LTR MaLR -47 332 255 1 1043 22 0 0 0 chr15 60130843 60130865 -43364109 + AT_rich Low_complexity Low_complexity 1 22 0 1 1043 1548 66 5 0 chr15 60131235 60131431 -43363543 + L1_Mus2 LINE L1 6370 6566 0 1 1043 632 77 0 11 chr15 60131529 60131621 -43363353 + (TTCC)n Simple_repeat Simple_repeat 3 93 0 1 1043 1136 84 0 0 chr15 60131629 60131771 -43363203 - B1_Mm SINE Alu -5 142 1 1 1043 2590 202 20 10 chr15 60131852 60132353 -43362621 + RLTR19C LTR ERVK 1 506 0 1 1043 298 386 57 57 chr15 60132409 60132706 -43362268 - L4 LINE RTE -440 1589 1293 1 1043 351 0 0 0 chr15 60133072 60133111 -43361863 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1 1043 894 278 99 76 chr15 60133720 60134183 -43360791 - RLTR26 LTR ERVK -168 474 1 1 1043 233 284 12 75 chr15 60134713 60134793 -43360181 + MIRc SINE MIR 79 153 -115 1 1043 269 294 52 116 chr15 60135163 60135192 -43359782 + ID_B1 SINE B4 63 182 -42 1 1043 452 286 37 22 chr15 60135192 60135328 -43359646 + B1F SINE Alu 7 144 -5 1 1043 324 300 92 82 chr15 60135336 60135532 -43359442 + B3A SINE B2 1 198 0 1 1043 3794 94 1 9 chr15 60136107 60136814 -43358160 + Lx LINE L1 5302 6004 -650 1 1043 7683 55 10 1 chr15 60136815 60137814 -43357160 - MTA_Mm-int LTR MaLR -88 1010 3 1 1043 3629 25 5 0 chr15 60137817 60138211 -43356763 - MTA_Mm LTR MaLR 0 396 1 1 1043 1693 81 18 0 chr15 60138211 60138432 -43356542 + Lx LINE L1 6000 6224 -430 1 1043 1870 154 58 0 chr15 60138443 60138754 -43356220 + Lx LINE L1 6319 6647 -7 1 1043 768 290 83 8 chr15 60139201 60139441 -43355533 + MTEb LTR MaLR 3 260 -119 1 1043 807 263 54 0 chr15 60139405 60139591 -43355383 - B4A SINE B4 -86 206 11 1 1043 284 353 32 25 chr15 60139594 60139751 -43355223 - MER5B DNA MER1_type -17 161 4 1 1043 232 333 84 81 chr15 60139751 60140071 -43354903 + L2c LINE L2 3066 3386 -1 1 1043 351 0 0 0 chr15 60140453 60140492 -43354482 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 1 1043 230 136 23 0 chr15 60140493 60140537 -43354437 + (CATA)n Simple_repeat Simple_repeat 4 48 0 1 1043 499 253 90 37 chr15 60140580 60140769 -43354205 + LTR50 LTR ERVL 13 211 -584 1 1043 192 342 87 27 chr15 60141561 60141711 -43353263 - L2c LINE L2 -319 3068 2910 1 1043 661 308 41 59 chr15 60142586 60143016 -43351958 - BGLII_B LTR ERVK -18 423 11 2 1043 2196 135 45 15 chr15 60143298 60143696 -43351278 + RMER17C LTR ERVK 1 410 0 2 1043 594 0 0 0 chr15 60144532 60144598 -43350376 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 2 1043 260 288 102 36 chr15 60146723 60146860 -43348114 - MIR SINE MIR -116 146 1 2 1043 391 281 79 0 chr15 60146899 60147013 -43347961 + MER5A DNA MER1_type 4 126 -63 2 1043 414 253 144 33 chr15 60149918 60150098 -43344876 - L1MA5 LINE L1 -6 6294 6095 2 1043 345 308 92 0 chr15 60150130 60150260 -43344714 - B1_Mur3 SINE Alu -7 142 1 2 1043 377 240 183 50 chr15 60150531 60150711 -43344263 + Lx8 LINE L1 7215 7418 -55 2 1043 885 212 108 120 chr15 60150790 60151189 -43343785 + MT2A LTR ERVL 1 526 -75 2 1043 2897 18 0 0 chr15 60151486 60151824 -43343150 + ORR1A0 LTR MaLR 1 338 -8 2 1043 286 143 65 21 chr15 60151831 60151924 -43343050 + (TA)n Simple_repeat Simple_repeat 1 97 0 2 1043 1272 54 0 0 chr15 60152021 60152168 -43342806 - B1_Mus1 SINE Alu -1 147 1 2 1043 344 22 0 22 chr15 60154744 60154790 -43340184 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1043 744 12 0 0 chr15 60154790 60154874 -43340100 + (GA)n Simple_repeat Simple_repeat 2 86 0 2 1043 934 274 67 93 chr15 60155699 60155965 -43339009 - MTE2b LTR MaLR 0 379 115 2 1043 3600 33 2 0 chr15 60155965 60156358 -43338616 + MTA_Mm LTR MaLR 3 396 0 2 1043 934 274 67 93 chr15 60156358 60156478 -43338496 - MTE2b LTR MaLR -265 114 3 2 1043 291 122 0 0 chr15 60156735 60156784 -43338190 + (T)n Simple_repeat Simple_repeat 1 49 0 2 1043 325 233 0 24 chr15 60157097 60157220 -43337754 + CT-rich Low_complexity Low_complexity 4 123 0 2 1043 4523 33 0 39 chr15 60157319 60157854 -43337120 - L1Md_F2 LINE L1 -12 6570 6057 2 1043 508 175 57 57 chr15 60157906 60158100 -43336874 - RMER17C LTR ERVK -135 275 82 2 1043 510 305 199 35 chr15 60158466 60158843 -43336131 + LTR16A LTR ERVL 9 447 -4 2 1043 1487 196 81 10 chr15 60159697 60160006 -43334968 + ORR1B2 LTR MaLR 1 331 -36 2 1043 475 158 0 19 chr15 60160213 60160311 -43334663 + (TA)n Simple_repeat Simple_repeat 2 97 0 2 1043 279 0 0 0 chr15 60160311 60160342 -43334632 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1043 8914 21 0 0 chr15 60160376 60161387 -43333587 + L1Md_T LINE L1 4576 5586 -297 2 130 9613 4 0 0 chr15 60161387 60162383 -43332591 + L1Md_T LINE L1 5587 6582 0 2 1044 348 43 0 0 chr15 60162432 60162478 -43332496 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1044 749 178 109 15 chr15 60163414 60163551 -43331423 - B1_Mur4 SINE Alu 0 150 1 2 1044 1219 196 11 61 chr15 60163698 60163975 -43330999 - Lx9 LINE L1 -418 7226 6964 2 1044 944 250 26 97 chr15 60163973 60164249 -43330725 + Lx9 LINE L1 7223 7478 -166 2 1044 801 161 290 6 chr15 60164249 60164411 -43330563 - B3 SINE B2 -6 210 3 2 1044 944 250 26 97 chr15 60164411 60164555 -43330419 + Lx9 LINE L1 7479 7613 -31 2 1044 405 0 0 0 chr15 60164809 60164854 -43330120 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1044 405 287 7 103 chr15 60164859 60164995 -43329979 - RSINE1 SINE B4 -36 129 7 2 1044 679 298 19 19 chr15 60165027 60165222 -43329752 + B3 SINE B2 2 200 -16 2 1044 186 43 0 0 chr15 60165222 60165245 -43329729 + (CAAAA)n Simple_repeat Simple_repeat 5 27 0 2 1044 679 298 19 19 chr15 60165245 60165261 -43329713 + B3 SINE B2 201 213 -3 2 1044 387 0 0 0 chr15 60165323 60165366 -43329608 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1044 207 273 0 0 chr15 60166489 60166544 -43328430 + (TATG)n Simple_repeat Simple_repeat 2 56 0 2 1044 204 167 0 23 chr15 60166662 60166705 -43328269 + T-rich Low_complexity Low_complexity 1 42 0 2 1044 295 340 55 36 chr15 60166801 60166966 -43328008 + MIRb SINE MIR 38 205 -63 2 1044 3971 45 16 12 chr15 60167314 60167857 -43327117 + L1Md_F3 LINE L1 6074 6584 0 2 1044 287 262 25 12 chr15 60168074 60168155 -43326819 - MLT1D LTR MaLR -153 352 271 2 1044 1213 321 138 58 chr15 60168309 60169069 -43325905 + MER21B LTR ERV1 43 863 0 2 1044 288 0 0 0 chr15 60169303 60169335 -43325639 + (TTA)n Simple_repeat Simple_repeat 1 32 0 2 1044 6472 89 8 28 chr15 60171832 60172812 -43322162 + L1_Mus2 LINE L1 5606 6566 0 2 1044 488 299 15 39 chr15 60172991 60173196 -43321778 - Lx8 LINE L1 -1068 6405 6206 2 1044 591 285 32 82 chr15 60173506 60173988 -43320986 - L1M4c LINE L1 -4193 2656 1868 2 1044 496 299 74 43 chr15 60174111 60174619 -43320355 - L1M4c LINE L1 -4723 2056 1513 2 1044 239 302 31 10 chr15 60175238 60175335 -43319639 + MTEb LTR MaLR 279 377 -2 2 1044 267 183 90 57 chr15 60175620 60175742 -43319232 - Lx9 LINE L1 -83 7561 7436 2 1044 3539 132 34 49 chr15 60175758 60176409 -43318565 - RLTR26 LTR ERVK -1 641 1 2 1044 450 194 107 0 chr15 60176413 60176516 -43318458 - Lx9 LINE L1 -211 7433 7320 2 1044 351 356 101 21 chr15 60176644 60177019 -43317955 - L1M4 LINE L1 -1165 4981 4572 2 1044 355 356 71 9 chr15 60177728 60177938 -43317036 - MIRb SINE MIR -6 262 40 2 1044 403 250 40 7 chr15 60178298 60178447 -43316527 + L1MA9 LINE L1 5995 6148 -164 2 1044 965 290 141 24 chr15 60178446 60179249 -43315725 - L1M2 LINE L1 -1569 4574 3678 2 1044 36297 30 0 0 chr15 60179253 60185906 -43309068 - L1Md_T LINE L1 0 6585 1 2 1044 242 348 21 27 chr15 60185910 60186096 -43308878 - L1M2 LINE L1 -2451 3692 3508 2 1044 772 212 13 20 chr15 60186241 60186390 -43308584 + B1_Mur1 SINE Alu 2 149 0 2 1044 938 309 72 27 chr15 60186439 60187279 -43307695 + L1MA4 LINE L1 5067 5940 -360 2 1044 606 286 243 3 chr15 60187294 60187648 -43307326 - Lx8 LINE L1 -1 7472 7034 2 1044 647 143 83 0 chr15 60188672 60188805 -43306169 - Lx LINE L1 -1 6653 6510 2 1044 3508 132 22 13 chr15 60188806 60189434 -43305540 - L1_Mur2 LINE L1 -1691 4186 3553 2 1044 1991 126 46 0 chr15 60189422 60189748 -43305226 - L1VL4 LINE L1 -5773 529 189 2 1044 246 133 0 0 chr15 60190207 60190252 -43304722 + L1M4 LINE L1 3736 3780 -2360 2 1044 376 309 152 43 chr15 60190496 60190648 -43304326 + L1M4 LINE L1 4090 4245 -1901 2 1044 345 47 0 0 chr15 60190648 60190691 -43304283 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1044 376 309 152 43 chr15 60190691 60190933 -43304041 + L1M4 LINE L1 4246 4527 -1619 2 1044 769 295 48 3 chr15 60191055 60191371 -43303603 + L1MCa LINE L1 2 331 -6177 2 1044 438 114 0 0 chr15 60191441 60191511 -43303463 + (TATG)n Simple_repeat Simple_repeat 1 70 0 2 1044 290 237 114 8 chr15 60191521 60191653 -43303321 - Lx9 LINE L1 -7 7637 7492 2 1044 739 166 7 22 chr15 60191727 60191863 -43303111 - B1_Mur4 SINE Alu -16 134 1 2 1044 1874 202 146 22 chr15 60192159 60192808 -43302166 - Lx9 LINE L1 -13 7631 6902 2 1044 19105 159 53 99 chr15 60192807 60197023 -43297951 - Lx5 LINE L1 -133 6917 2890 2 1044 590 0 14 0 chr15 60197023 60197093 -43297881 + (TTTTC)n Simple_repeat Simple_repeat 1 71 0 2 1044 19105 153 27 123 chr15 60197093 60198069 -43296905 - Lx5 LINE L1 -2988 2889 2051 2 1044 443 18 18 0 chr15 60198069 60198125 -43296849 + (TC)n Simple_repeat Simple_repeat 2 58 0 2 1044 19105 149 37 85 chr15 60198125 60199226 -43295748 - Lx5 LINE L1 -3827 2050 937 2 1044 269 48 48 0 chr15 60199260 60199302 -43295672 + (TTTTG)n Simple_repeat Simple_repeat 1 44 0 2 1044 1124 268 42 0 chr15 60199688 60199994 -43294980 - Lx9 LINE L1 -985 6659 6341 2 1044 1769 289 69 8 chr15 60200031 60200495 -43294479 - Lx8 LINE L1 -179 7294 6799 2 1044 351 0 0 0 chr15 60200495 60200534 -43294440 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1044 1769 289 69 8 chr15 60200534 60200679 -43294295 - Lx8 LINE L1 -675 6798 6649 2 1044 352 384 54 48 chr15 60200900 60201015 -43293959 - MLT1C LTR MaLR -29 438 332 2 1044 1383 170 0 0 chr15 60201015 60201239 -43293735 + URR1B DNA MER1_type 2 225 0 2 1044 352 384 54 48 chr15 60201239 60201495 -43293479 - MLT1C LTR MaLR -136 331 65 2 1044 288 0 0 0 chr15 60201968 60202000 -43292974 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1044 405 0 0 0 chr15 60202000 60202044 -43292930 + (GA)n Simple_repeat Simple_repeat 1 45 0 2 1044 421 274 11 0 chr15 60202142 60202237 -43292737 - MTE2b LTR MaLR -282 97 2 2 1044 693 53 0 0 chr15 60202750 60202844 -43292130 + (CA)n Simple_repeat Simple_repeat 2 95 0 2 1044 1131 228 96 55 chr15 60202847 60203314 -43291660 - MT2B LTR ERVL -60 541 6 2 1044 191 405 0 0 chr15 60203441 60203520 -43291454 + L3 LINE CR1 3803 3881 -608 2 1044 214 325 177 24 chr15 60204482 60204646 -43290328 + L3 LINE CR1 4201 4389 -100 2 1044 804 235 64 133 chr15 60204746 60205153 -43289821 + MTE2a LTR MaLR 1 379 0 2 1044 286 317 12 0 chr15 60205429 60205511 -43289463 + MTE2a LTR MaLR 282 364 -15 2 1044 237 233 48 135 chr15 60205548 60205652 -43289322 + MT2B LTR ERVL 160 254 -347 2 1044 950 144 207 5 chr15 60206074 60206262 -43288712 - URR1A DNA MER1_type 0 226 1 2 1044 213 94 0 0 chr15 60207004 60207036 -43287938 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1044 1544 184 11 56 chr15 60207061 60207182 -43287792 - RMER1C Other Other -9 1333 1219 2 1044 270 0 0 0 chr15 60207182 60207212 -43287762 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1044 342 0 0 0 chr15 60207212 60207250 -43287724 + (GA)n Simple_repeat Simple_repeat 1 38 0 2 1044 1544 184 11 56 chr15 60207250 60207485 -43287489 - RMER1C Other Other -124 1218 993 2 1044 510 17 0 0 chr15 60207487 60207546 -43287428 + (TCTCTG)n Simple_repeat Simple_repeat 4 62 0 2 1044 228 352 113 9 chr15 60207794 60207900 -43287074 - MLT1B LTR MaLR -70 320 204 2 1044 285 103 44 0 chr15 60208026 60208094 -43286880 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 2 1044 225 375 0 11 chr15 60208115 60208238 -43286736 - MIRm SINE MIR -143 133 9 2 1044 401 278 22 22 chr15 60209486 60209622 -43285352 + Lx8 LINE L1 6484 6619 -854 2 1044 804 208 112 0 chr15 60209626 60209804 -43285170 - MTD LTR MaLR -8 411 214 2 1044 504 48 0 0 chr15 60209814 60209877 -43285097 + (TCCC)n Simple_repeat Simple_repeat 4 66 0 2 1044 539 205 8 43 chr15 60209918 60210035 -43284939 - PB1D9 SINE Alu -7 113 1 2 1044 665 194 239 28 chr15 60210035 60210206 -43284768 - MTD LTR MaLR -212 209 1 2 1044 1316 229 89 3 chr15 60210386 60210758 -43284216 + Lx9 LINE L1 7132 7535 -109 2 1044 2533 135 79 49 chr15 60210780 60210884 -43284090 + RLTR17 LTR ERVK 212 326 -366 2 1044 1517 75 9 0 chr15 60210884 60211096 -43283878 + L1Md_F3 LINE L1 6371 6584 0 2 1044 2533 135 79 49 chr15 60211096 60211458 -43283516 + RLTR17 LTR ERVK 327 692 0 2 1044 986 228 67 61 chr15 60211466 60211853 -43283121 + RMER3D-int LTR ERVK 10 713 -2129 2 1044 6808 177 54 56 chr15 60212019 60213879 -43281095 + RMER3D-int LTR ERVK 464 2842 0 2 1044 2118 131 35 54 chr15 60213879 60214251 -43280723 + RLTR17 LTR ERVK 4 368 -324 2 1044 253 244 0 0 chr15 60214267 60214353 -43280621 + Lx9 LINE L1 7532 7617 -27 2 1044 247 289 45 57 chr15 60214503 60214659 -43280315 - MIRc SINE MIR -77 185 37 2 1044 225 83 0 0 chr15 60215659 60215695 -43279279 + (CAGAGA)n Simple_repeat Simple_repeat 3 38 0 3 1044 387 0 0 0 chr15 60215716 60215759 -43279215 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 1044 360 0 0 0 chr15 60216750 60216790 -43278184 + (TATG)n Simple_repeat Simple_repeat 3 42 0 3 1044 227 312 40 40 chr15 60216833 60216933 -43278041 - B3 SINE B2 -13 203 104 3 1044 201 162 0 0 chr15 60217606 60217643 -43277331 + A-rich Low_complexity Low_complexity 1 37 0 3 1044 593 258 78 0 chr15 60218717 60218845 -43276129 - B3A SINE B2 -60 138 1 3 1044 531 0 0 0 chr15 60218977 60219036 -43275938 + (TTCC)n Simple_repeat Simple_repeat 3 61 0 3 1044 420 97 0 0 chr15 60219131 60219193 -43275781 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 1044 210 300 134 24 chr15 60220708 60220790 -43274184 + PB1D7 SINE Alu 5 95 -25 3 1044 183 129 0 0 chr15 60220809 60220840 -43274134 + (GGAA)n Simple_repeat Simple_repeat 2 32 0 3 1044 410 301 76 11 chr15 60220984 60221246 -43273728 - L1M2 LINE L1 -929 5214 4936 3 1044 432 0 0 0 chr15 60221317 60221365 -43273609 + (TA)n Simple_repeat Simple_repeat 1 48 0 3 1044 183 42 0 0 chr15 60221365 60221389 -43273585 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1044 1028 271 93 75 chr15 60221393 60221715 -43273259 + L1MA8 LINE L1 5284 5568 -723 3 1044 1099 116 72 53 chr15 60221715 60221924 -43273050 + L1_Mus3 LINE L1 6426 6638 0 3 1044 1028 271 93 75 chr15 60221924 60222353 -43272621 + L1MA8 LINE L1 5569 6049 -242 3 1044 278 340 44 44 chr15 60222935 60223095 -43271879 - Lx8 LINE L1 -165 7308 7149 3 1044 404 278 0 9 chr15 60223226 60223335 -43271639 + Lx8 LINE L1 7219 7326 -147 3 1044 546 16 0 0 chr15 60223361 60223424 -43271550 + (GA)n Simple_repeat Simple_repeat 2 64 0 3 1044 550 274 37 0 chr15 60225529 60225664 -43269310 + B1_Mur1 SINE Alu 10 149 0 3 1044 252 0 0 0 chr15 60225706 60225734 -43269240 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 3 1044 266 311 47 28 chr15 60225944 60226050 -43268924 + MER5A1 DNA MER1_type 59 166 0 3 1044 2376 118 6 0 chr15 60226276 60226632 -43268342 - Lx2A1 LINE L1 0 7008 6651 3 1044 344 298 28 28 chr15 60226743 60226850 -43268124 - ID_B1 SINE B4 -52 172 66 3 1044 1119 144 16 122 chr15 60227452 60227705 -43267269 - URR1A DNA MER1_type 0 226 1 3 1044 33870 35 0 0 chr15 60229650 60235090 -43259884 + L1Md_T LINE L1 53 5589 -297 3 1044 8938 9 0 0 chr15 60235090 60236112 -43258862 + L1Md_T LINE L1 5590 6585 0 3 1044 809 258 11 21 chr15 60237540 60237726 -43257248 - B3 SINE B2 -30 186 3 3 1044 23 0 0 0 chr15 60238992 60239015 -43255959 + AT_rich Low_complexity Low_complexity 1 23 0 3 1044 1000 244 19 38 chr15 60239144 60239463 -43255511 - Lx7 LINE L1 0 7696 7384 3 1044 1471 265 161 81 chr15 60239460 60240174 -43254800 + Lx6 LINE L1 6659 7429 -31 3 1044 27 29 0 0 chr15 60240198 60240232 -43254742 + AT_rich Low_complexity Low_complexity 1 34 0 3 1044 495 186 0 97 chr15 60240280 60240393 -43254581 - ORR1B1 LTR MaLR -292 102 1 3 1044 2432 227 88 7 chr15 60240393 60241096 -43253878 - Lx7 LINE L1 -1218 6478 5717 3 1044 36229 30 0 1 chr15 60241139 60247630 -43247344 - L1Md_T LINE L1 0 6585 6 3 1044 4385 181 60 24 chr15 60247649 60248657 -43246317 - Lx7 LINE L1 -141 5739 4696 3 1044 21 0 0 0 chr15 60249045 60249066 -43245908 + AT_rich Low_complexity Low_complexity 1 21 0 3 1044 324 0 0 0 chr15 60249462 60249498 -43245476 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1044 24 32 0 0 chr15 60249575 60249606 -43245368 + AT_rich Low_complexity Low_complexity 1 31 0 3 1044 433 241 11 11 chr15 60249612 60249700 -43245274 - PB1D10 SINE Alu -8 109 22 3 1044 183 42 0 0 chr15 60249844 60249868 -43245106 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 1044 776 124 16 48 chr15 60249868 60250054 -43244920 + G-rich Low_complexity Low_complexity 1 180 0 3 1044 1143 117 0 0 chr15 60250055 60250235 -43244739 + (GA)n Simple_repeat Simple_repeat 1 180 0 3 1044 767 243 14 0 chr15 60250273 60250417 -43244557 - B3 SINE B2 -70 146 1 3 1044 752 290 111 41 chr15 60250963 60251279 -43243695 + RLTR14 LTR ERV1 1 338 -44 3 1044 809 179 0 7 chr15 60251297 60251432 -43243542 + B1_Mus2 SINE Alu 1 134 -13 3 1044 22 0 0 0 chr15 60251432 60251454 -43243520 + AT_rich Low_complexity Low_complexity 1 22 0 3 1044 216 0 0 0 chr15 60251935 60251959 -43243015 + (TAAAA)n Simple_repeat Simple_repeat 5 28 0 3 1044 285 147 39 26 chr15 60251972 60252049 -43242925 - Lx7 LINE L1 -186 7510 7433 3 1044 1215 193 113 49 chr15 60252072 60252399 -43242575 - Lx7 LINE L1 -582 7114 6767 3 1044 3125 108 80 13 chr15 60252462 60252988 -43241986 + Lx LINE L1 5938 6498 -156 3 1044 469 274 14 7 chr15 60252991 60253138 -43241836 - Lx6 LINE L1 -1048 6412 6265 3 1044 15074 180 52 20 chr15 60253149 60256302 -43238672 - Lx7 LINE L1 -1534 6162 2896 3 1044 1708 240 34 124 chr15 60256302 60256972 -43238002 + RMER19C LTR ERVK 2 611 0 3 1044 15074 177 47 19 chr15 60256972 60257542 -43237432 - Lx7 LINE L1 -2985 2895 2317 3 1044 4544 227 58 18 chr15 60257541 60258735 -43236239 - Lx7 LINE L1 -6431 1297 56 3 1044 1664 308 11 21 chr15 60260189 60260813 -43234161 + Lx8 LINE L1 6734 7351 -122 3 1044 359 374 0 0 chr15 60261952 60262083 -43232891 - L2a LINE L2 -10 3416 3286 3 1044 1069 109 228 0 chr15 60262241 60262425 -43232549 + URR1A DNA MER1_type 1 226 0 3 1044 705 87 0 0 chr15 60263923 60264038 -43230936 + (GA)n Simple_repeat Simple_repeat 2 116 0 3 1044 1359 133 157 17 chr15 60264042 60264341 -43230633 + Lx2 LINE L1 6657 6997 0 3 1044 1106 92 0 0 chr15 60264861 60265002 -43229972 - B1_Mm SINE Alu -5 142 2 3 1044 26537 76 6 4 chr15 60265564 60270079 -43224895 - L1Md_F2 LINE L1 0 6582 2059 3 1044 33032 42 0 0 chr15 60270079 60274351 -43220623 + L1Md_T LINE L1 1315 5586 -297 3 1044 8484 31 1 0 chr15 60274351 60275346 -43219628 + L1Md_T LINE L1 5587 6582 0 3 1044 5301 104 23 32 chr15 60275352 60277059 -43217915 - L1Md_F2 LINE L1 -3813 2070 380 3 1044 192 25 100 0 chr15 60277237 60277277 -43217697 + (TTTG)n Simple_repeat Simple_repeat 3 46 0 3 1044 385 270 43 28 chr15 60277988 60278129 -43216845 + MER3 DNA MER1_type 66 208 -1 3 1044 234 355 0 0 chr15 60279354 60279447 -43215527 - L2a LINE L2 -1 3425 3333 3 1044 253 244 46 92 chr15 60279515 60279754 -43215220 - Lx9 LINE L1 0 7644 7417 3 1044 1302 334 39 38 chr15 60279810 60280450 -43214524 + Lx8 LINE L1 6709 7349 -124 3 1044 205 329 0 0 chr15 60281377 60281456 -43213518 + (TA)n Simple_repeat Simple_repeat 1 79 0 3 1044 1425 205 199 3 chr15 60282452 60282794 -43212180 - MTD LTR MaLR -8 411 3 3 1044 990 227 14 9 chr15 60283698 60283916 -43211058 + URR1B DNA MER1_type 7 225 0 3 1044 515 331 72 72 chr15 60284038 60284373 -43210601 + ORR1E LTR MaLR 25 359 0 3 1044 245 88 0 0 chr15 60284809 60284843 -43210131 - U2 snRNA snRNA -154 34 1 3 1044 1298 24 12 0 chr15 60285348 60285516 -43209458 + L1Md_F3 LINE L1 6400 6569 -15 3 1044 21 36 0 0 chr15 60285538 60285566 -43209408 + AT_rich Low_complexity Low_complexity 1 28 0 3 1044 1557 336 33 0 chr15 60286871 60287389 -43207585 + Lx8 LINE L1 6356 6890 -583 3 1044 294 164 0 0 chr15 60287907 60287962 -43207012 + A-rich Low_complexity Low_complexity 5 59 0 3 1044 1655 229 83 71 chr15 60288002 60288036 -43206938 - RLTR11A LTR ERVK -28 500 466 3 1044 388 114 0 28 chr15 60288036 60288108 -43206866 + Lx2 LINE L1 6914 6983 -14 3 1044 1655 229 83 71 chr15 60288108 60288137 -43206837 - RLTR11A LTR ERVK -63 465 452 3 1044 528 56 0 0 chr15 60288137 60288209 -43206765 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 1044 1655 229 83 71 chr15 60288209 60288638 -43206336 - RLTR11A LTR ERVK -77 451 2 3 1044 1026 297 103 27 chr15 60288726 60289456 -43205518 + L1MC2 LINE L1 4295 5079 -1067 3 1044 1594 88 0 9 chr15 60289463 60289691 -43205283 + L1Md_F2 LINE L1 6354 6579 -3 3 1044 8146 34 1 2 chr15 60289765 60291204 -43203770 - L1Md_F2 LINE L1 -14 6568 5133 3 1044 701 283 39 14 chr15 60291232 60291440 -43203534 + B3 SINE B2 1 213 -3 3 1044 390 274 13 113 chr15 60291573 60291869 -43203105 + L1MC2 LINE L1 5317 5577 -867 3 1044 1278 289 80 23 chr15 60291883 60292125 -43202849 - Lx8 LINE L1 0 7473 7211 3 1044 3675 94 0 12 chr15 60292125 60292642 -43202332 - L1Md_F2 LINE L1 -12 6570 6060 3 1044 1278 289 80 23 chr15 60292642 60292838 -43202136 - Lx8 LINE L1 -263 7210 7011 3 130 1283 290 67 16 chr15 60292833 60293398 -43201576 + L1MC2 LINE L1 5589 6182 -162 3 1045 304 339 90 63 chr15 60293630 60294008 -43200966 + L1MC LINE L1 4983 5370 -776 3 1045 8799 185 63 23 chr15 60294105 60296963 -43198011 + Lx5 LINE L1 4034 7008 -42 3 1045 538 301 39 84 chr15 60297051 60297359 -43197615 + L1ME2 LINE L1 5553 5846 -318 3 1045 1225 242 87 11 chr15 60297720 60297996 -43196978 - RMER1B Other Other -724 342 46 3 1045 396 0 0 0 chr15 60301198 60301242 -43193732 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1045 25 0 0 0 chr15 60301494 60301519 -43193455 + AT_rich Low_complexity Low_complexity 1 25 0 3 1045 343 102 0 0 chr15 60301775 60301824 -43193150 - L1_Mur2 LINE L1 -6620 92 44 3 1045 6175 153 24 3 chr15 60301826 60302858 -43192116 + Lx4A LINE L1 6005 7058 0 3 1045 25 31 0 0 chr15 60303104 60303136 -43191838 + AT_rich Low_complexity Low_complexity 1 32 0 3 1045 762 259 122 0 chr15 60303143 60303340 -43191634 + ID_B1 SINE B4 2 222 -2 3 1045 1789 187 40 3 chr15 60303486 60303835 -43191139 - ORR1B2 LTR MaLR -2 365 4 3 1045 540 143 67 8 chr15 60303968 60304102 -43190872 + Lx9 LINE L1 7503 7644 0 3 1045 5113 71 17 11 chr15 60304124 60304822 -43190152 - L1_Mus3 LINE L1 -3 6635 5934 3 1045 1333 198 205 46 chr15 60305489 60305860 -43189114 - RLTR23 LTR ERV1 0 430 1 3 1045 766 316 88 50 chr15 60306094 60306457 -43188517 - MLT2D LTR ERVL -11 403 27 3 1045 342 243 0 0 chr15 60307263 60307366 -43187608 + (TG)n Simple_repeat Simple_repeat 1 103 0 3 1045 522 262 16 0 chr15 60307386 60307700 -43187274 + (TG)n Simple_repeat Simple_repeat 1 318 0 3 1045 614 223 0 6 chr15 60307700 60307858 -43187116 + (TA)n Simple_repeat Simple_repeat 2 158 0 3 1045 436 246 11 0 chr15 60307904 60308079 -43186895 + (TG)n Simple_repeat Simple_repeat 2 178 0 3 1045 22 0 0 0 chr15 60308151 60308173 -43186801 + AT_rich Low_complexity Low_complexity 1 22 0 3 1045 297 274 106 65 chr15 60308659 60308893 -43186081 - MTEa LTR MaLR -3 376 115 3 1045 1660 258 39 22 chr15 60309368 60309780 -43185194 - MTD LTR MaLR 0 419 1 3 1045 288 70 0 0 chr15 60309854 60309897 -43185077 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1045 26 0 0 0 chr15 60309966 60309992 -43184982 + AT_rich Low_complexity Low_complexity 1 26 0 4 1045 282 116 0 0 chr15 60310924 60310967 -43184007 + (GGGA)n Simple_repeat Simple_repeat 4 46 0 4 1045 2077 164 51 17 chr15 60310967 60311376 -43183598 - RMER10A LTR ERVL -19 423 1 4 1045 34168 94 13 18 chr15 60311429 60311716 -43183258 + L1Md_F2 LINE L1 218 503 -6079 4 1045 1048 66 0 0 chr15 60311716 60311853 -43183121 - B1_Mm SINE Alu 0 147 11 4 1045 34168 94 13 18 chr15 60311853 60317691 -43177283 + L1Md_F2 LINE L1 504 6339 -243 4 1045 314 23 23 0 chr15 60318291 60318334 -43176640 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 1045 505 39 26 0 chr15 60318782 60318859 -43176115 + L1Md_F2 LINE L1 6502 6580 -2 4 1045 597 64 0 0 chr15 60318896 60318974 -43176000 + (TC)n Simple_repeat Simple_repeat 1 78 0 4 1045 1439 203 8 0 chr15 60318993 60319254 -43175720 - Lx4A LINE L1 -3 7055 6793 4 1045 840 71 0 0 chr15 60319706 60319818 -43175156 + (GAGAA)n Simple_repeat Simple_repeat 4 115 0 4 1045 444 362 7 0 chr15 60319834 60319972 -43175002 + MTEb LTR MaLR 3 141 -218 4 1045 1130 329 3 16 chr15 60320035 60320350 -43174624 + MTE2b LTR MaLR 58 368 -11 4 1045 458 180 37 171 chr15 60320397 60320516 -43174458 + MTEb LTR MaLR 212 339 -40 4 1045 2841 35 37 0 chr15 60320516 60320864 -43174110 - L1Md_T LINE L1 0 6582 6222 4 1045 449 172 33 174 chr15 60320864 60320909 -43174065 + MTEb LTR MaLR 335 368 -11 4 1045 425 196 205 18 chr15 60323314 60323485 -43171489 - Lx9 LINE L1 -19 7625 7423 4 1045 183 156 0 0 chr15 60323572 60323604 -43171370 + (TATATG)n Simple_repeat Simple_repeat 1 32 0 4 1045 278 331 185 15 chr15 60323762 60323897 -43171077 + Charlie12 DNA MER1_type 10 167 -2706 4 1045 301 304 70 0 chr15 60323805 60323920 -43171054 - RMER30 DNA MER1_type -62 140 18 4 1045 259 310 9 91 chr15 60325141 60325199 -43169775 - MER47B DNA MER2_type -8 410 359 4 1045 1641 37 0 0 chr15 60325199 60325390 -43169584 + B2_Mm1a SINE B2 1 191 -2 4 1045 292 378 262 37 chr15 60325390 60325620 -43169354 - MER47B DNA MER2_type -60 358 75 4 1045 2193 117 82 0 chr15 60327573 60327925 -43167049 + Lx3A LINE L1 6586 6966 -15 4 1045 594 51 0 0 chr15 60327925 60328003 -43166971 + (TAAAA)n Simple_repeat Simple_repeat 3 80 0 4 1045 997 99 0 0 chr15 60328091 60328232 -43166742 - B1_Mm SINE Alu 0 147 7 4 1045 209 333 58 8 chr15 60328987 60329108 -43165866 - MIRc SINE MIR -33 235 109 4 1045 252 0 0 0 chr15 60329120 60329148 -43165826 + (CTAA)n Simple_repeat Simple_repeat 1 28 0 4 1045 720 311 18 35 chr15 60329521 60329804 -43165170 + Lx8 LINE L1 7166 7443 -30 4 1045 3902 144 8 6 chr15 60329848 60330513 -43164461 - L1_Mur2 LINE L1 -1641 4236 3571 4 1045 12251 59 1 3 chr15 60330546 60332108 -43162866 + L1Md_F2 LINE L1 4027 5586 -297 4 1045 7835 60 3 0 chr15 60332108 60333100 -43161874 + L1Md_F2 LINE L1 5587 6581 -1 4 1045 25 0 0 0 chr15 60333776 60333801 -43161173 + AT_rich Low_complexity Low_complexity 1 25 0 4 1045 252 267 158 104 chr15 60335151 60335555 -43159419 - MLT1H1 LTR MaLR -28 461 42 4 1045 1637 321 103 26 chr15 60336098 60336863 -43158111 - FordPrefect DNA Tip100 0 1683 860 4 1045 340 390 91 11 chr15 60337051 60337336 -43157638 - FordPrefect DNA Tip100 -1064 619 312 4 1045 1969 252 69 26 chr15 60338215 60338871 -43156103 + L1_Mur3 LINE L1 4705 5388 -492 4 1045 612 40 0 0 chr15 60338952 60339027 -43155947 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 4 1045 391 289 0 0 chr15 60339441 60339531 -43155443 + MER58B DNA MER1_type 172 261 -80 4 1045 188 261 65 0 chr15 60339684 60339730 -43155244 - MER5B DNA MER1_type -9 169 121 4 1045 1054 289 19 36 chr15 60339865 60340227 -43154747 - Lx6 LINE L1 -26 7434 7079 4 1045 218 373 95 0 chr15 60340480 60340638 -43154336 - MIRb SINE MIR -28 240 68 4 1045 242 97 97 0 chr15 60341135 60341197 -43153777 + (GAATG)n Simple_repeat Simple_repeat 3 70 0 4 1045 1575 182 111 9 chr15 60342444 60342777 -43152197 + ORR1B2 LTR MaLR 1 367 0 4 1045 3001 82 5 5 chr15 60342857 60343273 -43151701 - L1_Mus3 LINE L1 -7 6631 6216 4 1045 301 348 84 48 chr15 60343357 60343523 -43151451 + MER5A DNA MER1_type 13 184 -5 4 1045 21 0 0 0 chr15 60343799 60343820 -43151154 + AT_rich Low_complexity Low_complexity 1 21 0 4 1045 982 308 70 32 chr15 60343823 60344955 -43150019 - L1MC3 LINE L1 -1492 6390 5194 4 1045 354 261 119 42 chr15 60345037 60345205 -43149769 - L1MCc LINE L1 -5009 1414 1234 4 1045 4388 148 47 51 chr15 60345244 60346153 -43148821 + RMER17A2 LTR ERVK 1 906 0 4 1045 1524 279 47 0 chr15 60346870 60347257 -43147717 + MTD LTR MaLR 1 405 -14 4 1045 1577 236 162 45 chr15 60347894 60348426 -43146548 - RMER19B LTR ERVK 0 902 309 4 1045 353 228 19 47 chr15 60349014 60349120 -43145854 - Kanga1d DNA Tc2 -64 545 443 4 1045 534 360 26 18 chr15 60349280 60349552 -43145422 + B4A SINE B4 9 282 -10 4 1045 273 333 83 0 chr15 60350953 60351073 -43143901 - MLT1F2 LTR MaLR -25 480 351 4 1045 489 323 40 45 chr15 60351363 60351561 -43143413 - MLT1F2 LTR MaLR -77 483 287 4 1045 5161 150 10 47 chr15 60351662 60352387 -43142587 + RMER12 LTR ERVK 7 713 -609 4 1045 1070 80 0 0 chr15 60352387 60352524 -43142450 + B1_Mus1 SINE Alu 2 138 -10 4 1045 801 58 0 0 chr15 60352532 60352635 -43142339 + (GAGAA)n Simple_repeat Simple_repeat 1 103 0 4 1045 5161 150 10 47 chr15 60352635 60352818 -43142156 + RMER12 LTR ERVK 714 890 -432 4 1045 273 75 0 0 chr15 60352818 60352858 -43142116 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1045 302 291 102 8 chr15 60352877 60352995 -43141979 - HAL1-3A_ME LINE L1 -446 2412 2284 4 1045 804 114 0 37 chr15 60352995 60353159 -43141815 + C-rich Low_complexity Low_complexity 5 162 0 4 1045 821 180 68 98 chr15 60353184 60353456 -43141518 + RMER12 LTR ERVK 988 1302 -20 4 1045 282 312 12 0 chr15 60353625 60353705 -43141269 - ID4_ SINE ID 0 83 3 4 1045 297 388 158 32 chr15 60353959 60354212 -43140762 - MLT1F2 LTR MaLR -275 285 1 4 1045 183 277 30 15 chr15 60354613 60354679 -43140295 + L2c LINE L2 2998 3064 -323 4 1045 267 308 53 53 chr15 60355033 60355146 -43139828 - PB1D10 SINE Alu 0 117 5 4 1045 359 365 92 16 chr15 60355185 60355489 -43139485 - L1M5 LINE L1 -478 5762 5436 4 1045 410 277 28 56 chr15 60355790 60355897 -43139077 - PB1D10 SINE Alu -7 110 7 4 1045 347 236 196 107 chr15 60355897 60355935 -43139039 - ID_B1 SINE B4 -3 217 65 4 1045 1132 43 0 0 chr15 60355937 60356076 -43138898 - B1_Mus1 SINE Alu -9 139 1 4 1045 230 284 86 0 chr15 60356376 60356457 -43138517 - RMER1C Other Other -4 1338 1251 4 1045 493 316 133 23 chr15 60356412 60356713 -43138261 - Lx8 LINE L1 -30 7443 7110 4 1045 348 317 0 0 chr15 60356793 60356912 -43138062 - MTEa LTR MaLR -258 121 3 4 1045 34 0 0 0 chr15 60357367 60357401 -43137573 + AT_rich Low_complexity Low_complexity 1 34 0 4 1045 554 299 108 20 chr15 60357492 60358222 -43136752 - L1M5 LINE L1 -1666 4480 3687 4 1045 462 377 10 10 chr15 60358618 60358819 -43136155 - MLT1D LTR MaLR -11 494 294 4 1045 251 267 0 32 chr15 60359017 60359079 -43135895 - MLT2B4 LTR ERVL -473 83 24 4 1045 446 297 43 19 chr15 60359167 60359328 -43135646 - MLT1D LTR MaLR -309 196 32 4 1045 745 182 7 35 chr15 60359388 60359530 -43135444 + B1_Mur4 SINE Alu 6 143 -7 4 1045 277 325 0 0 chr15 60359689 60359815 -43135159 - L1M5 LINE L1 -3160 2986 2861 4 1045 7147 63 0 0 chr15 60359897 60360862 -43134112 + L1Md_T LINE L1 5677 6582 0 4 1045 1016 75 22 0 chr15 60360862 60360996 -43133978 + ORR1A2 LTR MaLR 148 284 -43 4 1045 2741 55 0 16 chr15 60360996 60361387 -43133587 + L1Md_F2 LINE L1 6222 6582 0 4 1045 421 304 170 21 chr15 60361915 60362103 -43132871 + B3 SINE B2 1 216 0 4 1045 257 241 0 17 chr15 60362465 60362524 -43132450 - Lx9 LINE L1 -1685 5959 5902 4 1045 692 309 124 13 chr15 60362524 60362918 -43132056 + Lx9 LINE L1 7196 7633 -11 4 1045 22 35 0 0 chr15 60362928 60362957 -43132017 + AT_rich Low_complexity Low_complexity 1 29 0 4 1045 441 0 0 0 chr15 60363003 60363052 -43131922 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1045 297 321 113 14 chr15 60363343 60363627 -43131347 - L1M2 LINE L1 -1129 5014 4703 4 1045 293 329 0 0 chr15 60365316 60365398 -43129576 + ID4 SINE ID 1 82 -1 4 1045 686 230 11 0 chr15 60365803 60365981 -43128993 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 4 1045 742 229 29 23 chr15 60366092 60366266 -43128708 + B2_Mm2 SINE B2 1 175 -20 4 1045 2609 212 19 61 chr15 60366276 60366914 -43128060 + RMER19C LTR ERVK 1 611 0 4 1045 473 345 0 0 chr15 60367349 60367494 -43127480 + ID_B1 SINE B4 80 224 0 4 1045 351 113 0 0 chr15 60367774 60367827 -43127147 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1045 2487 89 37 37 chr15 60367963 60368372 -43126602 - RLTR9E LTR ERVK 0 409 1 4 1045 21 82 0 0 chr15 60368374 60368423 -43126551 + AT_rich Low_complexity Low_complexity 1 49 0 4 1045 26 0 0 0 chr15 60369326 60369352 -43125622 + AT_rich Low_complexity Low_complexity 1 26 0 4 1045 387 349 132 35 chr15 60369496 60369754 -43125220 + RMER15 LTR ERVL 275 557 -18 4 1045 352 369 70 19 chr15 60370063 60370378 -43124596 + L1MC2 LINE L1 5992 6322 -22 4 1045 786 319 24 27 chr15 60370400 60370693 -43124281 + B4A SINE B4 1 292 0 4 1045 335 338 96 19 chr15 60370758 60371072 -43123902 + L1M5 LINE L1 3694 4031 -2115 4 1045 255 264 0 94 chr15 60371829 60371925 -43123049 + MTE2a LTR MaLR 1 87 -292 4 1045 594 265 186 80 chr15 60371917 60372266 -43122708 - RMER12 LTR ERVK -141 1181 952 4 1045 706 249 63 28 chr15 60372331 60372561 -43122413 + MTE2a LTR MaLR 141 379 0 4 1045 293 274 51 15 chr15 60373018 60373155 -43121819 - L1MC LINE L1 -826 5518 5377 4 1045 214 219 73 0 chr15 60373230 60373271 -43121703 - BC1_Mm scRNA scRNA -96 56 13 4 1045 1380 224 68 20 chr15 60373604 60373955 -43121019 - ORR1D2 LTR MaLR -2 368 1 4 1045 245 335 38 81 chr15 60374064 60374249 -43120725 + Kanga1 DNA Tc2 1344 1520 -225 4 1045 2205 156 73 13 chr15 60374618 60375015 -43119959 + MTC LTR MaLR 1 421 0 4 1045 471 268 42 6 chr15 60375658 60375823 -43119151 + L1MB1 LINE L1 5997 6167 -1 4 1045 685 158 35 9 chr15 60375900 60376015 -43118959 + B3 SINE B2 1 118 -98 5 1045 222 62 0 0 chr15 60376328 60376360 -43118614 + (CAT)n Simple_repeat Simple_repeat 1 32 0 5 1045 1834 73 30 8 chr15 60376399 60376662 -43118312 + L1Md_F2 LINE L1 6312 6580 -2 5 1045 241 250 104 42 chr15 60377981 60378077 -43116897 + ORR1B1-int LTR MaLR 823 924 -585 5 1045 518 314 38 63 chr15 60378092 60378330 -43116644 - MLT1A1 LTR MaLR -6 402 171 5 1045 2036 148 0 0 chr15 60378335 60378653 -43116321 - ORR1A3 LTR MaLR -8 318 1 5 1045 253 319 0 21 chr15 60378696 60378789 -43116185 - MLT1A1 LTR MaLR -273 92 2 5 1045 1063 343 85 45 chr15 60378897 60379459 -43115515 + MER21B LTR ERV1 172 756 -107 5 1045 712 224 42 7 chr15 60380977 60381121 -43113853 - B1_Mur2 SINE Alu 0 149 1 5 1045 232 207 0 33 chr15 60381882 60381977 -43112997 + GA-rich Low_complexity Low_complexity 1 91 0 5 1045 772 244 66 20 chr15 60382117 60382314 -43112660 - B3 SINE B2 -10 206 1 5 1045 466 282 7 7 chr15 60382326 60382469 -43112505 - Tigger7 DNA MER2_type -95 2396 2255 5 1045 355 290 223 5 chr15 60382498 60382682 -43112292 - Tigger7 DNA MER2_type -2080 411 188 5 1045 276 150 62 62 chr15 60383123 60383187 -43111787 - LTR37A LTR ERV1 -355 71 8 5 1045 24 32 0 0 chr15 60383204 60383235 -43111739 + AT_rich Low_complexity Low_complexity 1 31 0 5 1045 517 252 18 18 chr15 60383352 60383461 -43111513 + B1_Mur1 SINE Alu 41 149 0 5 1045 23 0 0 0 chr15 60383511 60383534 -43111440 + AT_rich Low_complexity Low_complexity 1 23 0 5 1045 663 155 46 8 chr15 60384360 60384490 -43110484 - RLTR24 LTR ERV1 -188 341 207 5 1045 240 73 122 0 chr15 60384826 60384867 -43110107 - RLTR24 LTR ERV1 -296 233 188 5 1045 1044 278 27 79 chr15 60384866 60385274 -43109700 + MTE2a LTR MaLR 20 405 -14 5 1045 360 339 2 19 chr15 60385653 60385763 -43109211 - B4 SINE B4 -148 144 34 5 1045 406 181 0 27 chr15 60386660 60386672 -43108302 - B1_Mm SINE Alu 0 147 136 5 1045 264 77 0 0 chr15 60386672 60386711 -43108263 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1045 406 181 0 27 chr15 60386711 60386772 -43108202 - B1_Mm SINE Alu -12 135 76 5 1045 366 214 21 53 chr15 60386764 60386858 -43108116 + MLT1A1 LTR MaLR 316 406 -2 5 1045 200 333 0 0 chr15 60386864 60386927 -43108047 - MIR SINE MIR -61 147 85 5 1045 652 176 110 0 chr15 60386950 60387086 -43107888 + RLTR24 LTR ERV1 1 151 -378 5 1045 2543 76 139 2 chr15 60387160 60387584 -43107390 - RLTR47_MM LTR ERV1 -50 482 1 5 1045 2170 211 91 56 chr15 60387700 60388324 -43106650 - RMER13A LTR ERVK -214 646 1 5 1045 614 166 116 120 chr15 60388324 60388557 -43106417 + RLTR24 LTR ERV1 109 340 -189 5 1045 827 248 242 73 chr15 60388605 60389007 -43105967 + RLTR33 LTR ERVK 182 651 -27 5 1045 1025 145 105 0 chr15 60389033 60389205 -43105769 + RLTR24 LTR ERV1 340 529 0 5 1045 272 320 29 21 chr15 60389394 60389520 -43105454 - B1F SINE Alu 0 149 19 5 1045 229 328 63 63 chr15 60389399 60389542 -43105432 - ID_B1 SINE B4 -3 221 79 5 1045 757 267 62 34 chr15 60389665 60389834 -43105140 - B3 SINE B2 0 216 39 5 1045 1069 142 184 0 chr15 60389834 60390024 -43104950 - URR1B DNA MER1_type 0 225 1 5 1045 757 267 62 34 chr15 60390024 60390063 -43104911 - B3 SINE B2 -178 38 2 5 1045 3091 20 0 0 chr15 60390300 60390646 -43104328 - ORR1A0 LTR MaLR 0 346 1 5 1045 1024 52 88 0 chr15 60390705 60390841 -43104133 + B1_Mus1 SINE Alu 1 148 0 5 1045 243 0 0 0 chr15 60390841 60390868 -43104106 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1045 275 0 29 0 chr15 60390928 60390963 -43104011 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 5 1045 570 294 89 72 chr15 60391328 60391848 -43103126 - RMER13A LTR ERVK -28 599 14 5 1045 402 21 0 0 chr15 60392755 60392802 -43102172 + (TC)n Simple_repeat Simple_repeat 2 48 0 5 1045 572 262 0 15 chr15 60392810 60392942 -43102032 - B1F2 SINE Alu -16 133 4 5 1045 215 81 0 51 chr15 60393129 60393168 -43101806 + (CCCCCT)n Simple_repeat Simple_repeat 4 40 0 5 1045 234 0 0 0 chr15 60393366 60393392 -43101582 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 1045 308 322 41 16 chr15 60393557 60393680 -43101294 - B3A SINE B2 -28 170 45 5 1045 223 426 0 34 chr15 60393745 60393864 -43101110 - PB1D10 SINE Alu -2 115 1 5 1045 289 299 131 22 chr15 60393980 60394202 -43100772 + RMER12 LTR ERVK 742 987 -335 5 1045 21 71 0 0 chr15 60395264 60395306 -43099668 + AT_rich Low_complexity Low_complexity 1 42 0 5 1045 614 299 25 123 chr15 60395370 60395694 -43099280 + B4 SINE B4 1 292 0 5 1045 1359 75 5 0 chr15 60395945 60396131 -43098843 - L1_Mus4 LINE L1 -402 6234 6048 5 1045 1340 95 123 21 chr15 60396131 60396367 -43098607 + L1_Mus4 LINE L1 6372 6631 -5 5 1045 26 0 0 0 chr15 60396484 60396510 -43098464 + AT_rich Low_complexity Low_complexity 1 26 0 5 1045 559 248 35 0 chr15 60397758 60397903 -43097071 - MER5A1 DNA MER1_type -16 150 1 5 1045 2346 219 127 37 chr15 60398016 60398416 -43096558 + RMER1B Other Other 12 448 -618 5 1045 447 19 0 0 chr15 60398416 60398468 -43096506 + (TGG)n Simple_repeat Simple_repeat 1 52 0 5 1045 2346 219 127 37 chr15 60398468 60398722 -43096252 + RMER1B Other Other 449 724 -342 5 1045 775 195 9 105 chr15 60398737 60398850 -43096124 + RMER1B Other Other 857 952 -114 5 1045 1437 185 89 72 chr15 60398850 60399241 -43095733 - RMER10B LTR ERVL 0 398 1 5 1045 775 195 9 105 chr15 60399241 60399356 -43095618 + RMER1B Other Other 953 1063 -3 5 1045 1376 190 96 75 chr15 60399844 60400065 -43094909 - ORR1C2 LTR MaLR 0 384 173 5 1045 275 0 29 0 chr15 60400065 60400100 -43094874 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 1045 1376 190 96 75 chr15 60400100 60400254 -43094720 - ORR1C2 LTR MaLR -212 172 1 5 1045 287 393 23 27 chr15 60400468 60400728 -43094246 + MIR SINE MIR 1 262 0 5 1045 575 287 62 52 chr15 60403024 60403296 -43091678 + B4A SINE B4 2 276 -16 5 1045 266 277 52 33 chr15 60403640 60403793 -43091181 + L1MEc LINE L1 1380 1535 -4865 5 1045 980 281 58 55 chr15 60404665 60405019 -43089955 - MTE2a LTR MaLR 0 419 56 5 1045 327 310 91 26 chr15 60405044 60405223 -43089751 - MLT2B4 LTR ERVL -354 200 1 5 1045 228 300 68 41 chr15 60405554 60405627 -43089347 + ID4_ SINE ID 2 76 -7 5 1045 3226 229 58 24 chr15 60405837 60406991 -43087983 - Lx9 LINE L1 0 7644 6399 5 1045 408 71 0 0 chr15 60407418 60407474 -43087500 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1045 299 225 11 22 chr15 60407628 60407692 -43087282 + (TA)n Simple_repeat Simple_repeat 2 65 0 5 1045 372 22 0 0 chr15 60407692 60407737 -43087237 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1045 299 225 11 22 chr15 60407737 60407763 -43087211 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 1045 240 35 0 0 chr15 60407960 60407989 -43086985 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1045 196 353 55 46 chr15 60408899 60409116 -43085858 + L2b LINE L2 2776 2994 -425 5 1045 184 372 129 72 chr15 60409856 60410134 -43084840 + L2b LINE L2 3081 3374 -1 5 1045 712 215 163 93 chr15 60410843 60411187 -43083787 - RLTR9A LTR ERVK 0 368 1 5 1045 235 338 93 13 chr15 60411394 60411544 -43083430 + MLT1K LTR MaLR 387 548 -47 5 1045 243 298 38 90 chr15 60411796 60411929 -43083045 + MER5B DNA MER1_type 4 129 -49 5 1045 181 368 0 38 chr15 60411926 60412005 -43082969 - MIR3 SINE MIR -49 159 84 5 1045 189 0 0 0 chr15 60412145 60412166 -43082808 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1045 396 0 0 0 chr15 60412166 60412209 -43082765 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 5 1045 242 338 63 13 chr15 60412309 60412468 -43082506 + MIR SINE MIR 96 262 0 5 1045 776 292 43 34 chr15 60412899 60413108 -43081866 + B3 SINE B2 1 211 -5 5 1045 1084 56 12 24 chr15 60413458 60413622 -43081352 + L1Md_F2 LINE L1 6419 6580 -2 5 1045 964 225 102 73 chr15 60414550 60414982 -43079992 + RMER2 LTR ERV1 1 539 -28 5 1045 974 92 50 0 chr15 60415118 60415259 -43079715 + B1_Mus1 SINE Alu 1 148 0 5 1045 262 260 203 8 chr15 60415740 60415868 -43079106 - MER5A1 DNA MER1_type -1 165 13 5 1045 180 111 0 0 chr15 60416476 60416503 -43078471 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1045 336 384 132 18 chr15 60416830 60417225 -43077749 + MLT1K LTR MaLR 154 593 -2 5 1045 260 393 82 0 chr15 60417230 60417365 -43077609 + B1F1 SINE Alu 4 149 0 5 1045 429 70 0 0 chr15 60417368 60417425 -43077549 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 1045 208 250 87 14 chr15 60417781 60417850 -43077124 + MIR3 SINE MIR 111 184 -24 5 1045 1106 286 12 120 chr15 60418131 60418454 -43076520 - ORR1E LTR MaLR -1 358 66 5 1045 3086 50 0 0 chr15 60418454 60418834 -43076140 + L1Md_F2 LINE L1 6191 6570 -12 5 1045 1106 286 12 120 chr15 60418834 60418911 -43076063 - ORR1E LTR MaLR -294 65 1 5 1045 707 304 64 75 chr15 60418978 60419245 -43075729 + B4A SINE B4 2 265 -27 5 1045 228 163 0 0 chr15 60419300 60419343 -43075631 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 1045 279 0 0 0 chr15 60419343 60419374 -43075600 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 1045 217 348 58 41 chr15 60419414 60419585 -43075389 - MIR SINE MIR -75 187 14 5 1045 1081 55 13 40 chr15 60420098 60420248 -43074726 - B1_Mm SINE Alu 0 147 2 5 1045 16828 88 8 7 chr15 60420302 60423573 -43071401 - L1_Mus1 LINE L1 -1 6566 3290 5 1045 2929 41 57 0 chr15 60423575 60423942 -43071032 - RLTR10 LTR ERVK -2 388 1 5 130 8441 18 0 0 chr15 60423944 60424939 -43070035 - RLTR10-int LTR ERVK -3 1984 990 5 1046 320 289 12 25 chr15 60425021 60425184 -43069790 - RLTR10-int LTR ERVK -5987 1594 1434 5 1046 7599 36 6 0 chr15 60425228 60426174 -43068800 - RLTR10-int LTR ERVK -995 992 41 5 1046 2929 41 57 0 chr15 60426186 60426553 -43068421 - RLTR10 LTR ERVK -2 388 1 5 1046 13037 133 28 5 chr15 60426554 60429600 -43065374 - L1Md_F LINE L1 -2589 3294 177 5 1046 499 292 20 45 chr15 60430513 60430659 -43064315 + B3A SINE B2 2 144 -54 5 1046 315 96 0 0 chr15 60430659 60430711 -43064263 + (TCTCTG)n Simple_repeat Simple_repeat 3 54 0 5 1046 204 40 0 0 chr15 60430711 60430735 -43064239 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 1046 499 292 20 45 chr15 60430735 60430788 -43064186 + B3A SINE B2 145 196 -2 5 1046 291 269 0 13 chr15 60431248 60431327 -43063647 + ID4 SINE ID 5 82 -1 5 1046 217 137 39 19 chr15 60431327 60431379 -43063595 + A-rich Low_complexity Low_complexity 1 53 0 5 1046 217 416 30 0 chr15 60431385 60431486 -43063488 - L3 LINE CR1 -6 4483 4380 5 1046 268 185 208 42 chr15 60431815 60431911 -43063063 - B1F1 SINE Alu -16 133 22 5 1046 226 217 22 0 chr15 60431870 60431916 -43063058 - ID_B1 SINE B4 -80 144 98 6 1046 273 89 0 0 chr15 60432318 60432363 -43062611 + (TA)n Simple_repeat Simple_repeat 1 45 0 6 1046 198 0 0 0 chr15 60432362 60432384 -43062590 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 1046 799 145 68 23 chr15 60432384 60432560 -43062414 - Lx9 LINE L1 -128 7516 7333 6 1046 22 56 0 0 chr15 60434193 60434229 -43060745 + AT_rich Low_complexity Low_complexity 1 36 0 6 1046 180 111 0 0 chr15 60434360 60434387 -43060587 + (TCTCCC)n Simple_repeat Simple_repeat 6 32 0 6 1046 473 264 8 0 chr15 60434460 60434581 -43060393 - Lx8 LINE L1 -350 7123 7002 6 1046 622 250 16 11 chr15 60434607 60434793 -43060181 - Lx8 LINE L1 -540 6933 6747 6 1046 1297 198 38 11 chr15 60434895 60435223 -43059751 + Lx7 LINE L1 4071 4388 -1492 6 1046 1757 226 163 28 chr15 60435224 60435757 -43059217 + RLTR17 LTR ERVK 1 605 -87 6 1046 454 186 10 10 chr15 60435798 60435896 -43059078 + Lx7 LINE L1 4384 4481 -1399 6 1046 4982 180 30 61 chr15 60435892 60436176 -43058798 + Lx7 LINE L1 4691 4933 -947 6 1046 1149 49 28 0 chr15 60436176 60436320 -43058654 - B1_Mus1 SINE Alu 0 148 1 6 1046 4982 238 79 48 chr15 60436320 60438428 -43056546 + Lx7 LINE L1 4934 7156 -540 6 1046 321 26 0 0 chr15 60438428 60438466 -43056508 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1046 3486 286 118 37 chr15 60438466 60438958 -43056016 + Lx7 LINE L1 7157 7693 -3 6 1046 1383 41 0 0 chr15 60439131 60439301 -43055673 + (GAAA)n Simple_repeat Simple_repeat 1 170 0 6 1046 354 211 0 0 chr15 60439305 60439409 -43055565 + GA-rich Low_complexity Low_complexity 2 105 0 6 1046 256 341 12 12 chr15 60439427 60439599 -43055375 - L1M5 LINE L1 -259 5903 5732 6 1046 867 274 53 5 chr15 60439909 60440096 -43054878 + B3 SINE B2 1 196 -20 6 1046 480 182 39 29 chr15 60440391 60440493 -43054481 + PB1D9 SINE Alu 17 119 -1 6 1046 1106 186 0 8 chr15 60440607 60440845 -43054129 + Lx9 LINE L1 7282 7517 -127 6 1046 183 184 0 0 chr15 60440845 60440883 -43054091 + (TATG)n Simple_repeat Simple_repeat 3 40 0 6 1046 219 36 0 0 chr15 60440894 60440922 -43054052 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1046 543 125 117 0 chr15 60440922 60441050 -43053924 + Lx9 LINE L1 7499 7641 -3 6 1046 279 0 0 0 chr15 60441106 60441137 -43053837 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1046 392 307 5 43 chr15 60442285 60442425 -43052549 + GA-rich Low_complexity Low_complexity 1 135 0 6 1046 1375 0 28 0 chr15 60442425 60442674 -43052300 + (TAGA)n Simple_repeat Simple_repeat 1 255 0 6 1046 392 307 5 43 chr15 60442674 60442719 -43052255 + polypurine Low_complexity Low_complexity 136 179 0 6 1046 249 330 33 11 chr15 60442769 60442861 -43052113 - ORR1E LTR MaLR -257 102 9 6 1046 360 0 0 0 chr15 60442935 60442975 -43051999 + (GGA)n Simple_repeat Simple_repeat 3 42 0 6 1046 376 336 76 38 chr15 60442981 60443297 -43051677 + L1MC5 LINE L1 7059 7386 -575 6 1046 996 260 95 3 chr15 60443352 60443668 -43051306 + L1M2 LINE L1 4863 5207 -936 6 1046 277 318 142 50 chr15 60444702 60444883 -43050091 - B4 SINE B4 -16 276 82 6 1046 249 321 131 38 chr15 60444974 60445232 -43049742 + ORR1D2 LTR MaLR 73 368 -2 6 1046 366 319 88 36 chr15 60445894 60446011 -43048963 + MER33 DNA MER1_type 13 135 -189 6 1046 2318 110 3 10 chr15 60446011 60446324 -43048650 - RLTR10E LTR ERVK 0 311 1 6 1046 366 319 88 36 chr15 60446324 60446456 -43048518 + MER33 DNA MER1_type 136 275 -49 6 1046 491 278 78 83 chr15 60448437 60448629 -43046345 - B3A SINE B2 -7 191 1 6 1046 676 134 52 28 chr15 60449936 60450263 -43044711 + (TCTA)n Simple_repeat Simple_repeat 1 335 0 6 1046 787 321 45 38 chr15 60450286 60450574 -43044400 - B4A SINE B4 -2 290 1 6 1046 236 328 75 22 chr15 60451400 60451534 -43043440 + MIRb SINE MIR 88 228 -40 6 1046 8311 34 7 0 chr15 60453575 60455014 -43039960 + L1Md_F3 LINE L1 5145 6584 0 6 1046 224 30 30 0 chr15 60455027 60455060 -43039914 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 6 1046 1204 75 14 0 chr15 60455163 60455309 -43039665 + B1_Mus1 SINE Alu 1 148 0 6 1046 1584 355 98 34 chr15 60455391 60455538 -43039436 + Lx9 LINE L1 5756 5909 -1564 6 1046 714 34 0 0 chr15 60455538 60455627 -43039347 + (TG)n Simple_repeat Simple_repeat 2 90 0 6 1046 1584 355 98 34 chr15 60455627 60455843 -43039131 + Lx9 LINE L1 5910 6146 -1327 6 1046 276 30 0 0 chr15 60455843 60455876 -43039098 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 6 1046 3800 260 80 31 chr15 60455876 60457008 -43037966 + Lx9 LINE L1 6147 7477 -167 6 1046 267 79 0 0 chr15 60457008 60457046 -43037928 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1046 3800 257 80 31 chr15 60457046 60457168 -43037806 + Lx9 LINE L1 7478 7607 -37 6 1046 6905 165 22 19 chr15 60457185 60457953 -43037021 + MusHAL1 LINE L1 582 1359 -1353 6 1046 1239 130 54 0 chr15 60457953 60458137 -43036837 + B2_Mm2 SINE B2 1 194 -1 6 1046 6905 165 22 19 chr15 60458137 60458706 -43036268 + MusHAL1 LINE L1 1360 1923 -789 6 1046 838 327 54 14 chr15 60459598 60459952 -43035022 + MER68 LTR ERVL 178 545 -18 6 1046 227 364 42 26 chr15 60459957 60460146 -43034828 + LTR78 LTR ERV1 766 957 -347 6 1046 201 74 0 0 chr15 60460870 60460897 -43034077 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 6 1046 794 331 97 15 chr15 60461084 60461477 -43033497 - Lx8 LINE L1 -217 7256 6832 6 1046 651 258 0 0 chr15 60461889 60462021 -43032953 - B1F SINE Alu -13 136 5 6 1046 244 234 346 0 chr15 60462724 60462831 -43032143 + MER5B DNA MER1_type 9 152 -26 6 1046 1058 272 55 52 chr15 60463399 60463729 -43031245 + Lx9 LINE L1 6521 6851 -793 6 1046 418 286 47 7 chr15 60463757 60463905 -43031069 + Lx6 LINE L1 7244 7397 -63 6 1046 368 278 22 0 chr15 60464515 60464528 -43030446 - MER20 DNA MER1_type -127 92 80 6 1046 435 52 0 0 chr15 60464528 60464586 -43030388 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 1046 368 278 22 0 chr15 60464586 60464662 -43030312 - MER20 DNA MER1_type -140 79 2 6 1046 202 344 48 24 chr15 60465644 60465769 -43029205 + MIRb SINE MIR 120 247 -21 6 1046 293 294 11 11 chr15 60465803 60465896 -43029078 - PB1D10 SINE Alu 0 117 25 6 1046 218 171 0 0 chr15 60465923 60465958 -43029016 + CT-rich Low_complexity Low_complexity 3 37 0 6 1046 228 264 27 14 chr15 60467972 60468045 -43026929 - MIR SINE MIR -96 166 93 6 1046 814 216 80 137 chr15 60468607 60468944 -43026030 - RLTR14 LTR ERV1 -54 328 11 6 1046 412 236 236 20 chr15 60469099 60469298 -43025676 - RLTR14-int LTR ERV1 -151 5166 4925 6 1046 686 332 61 46 chr15 60470238 60470764 -43024210 - RLTR14-int LTR ERV1 -1665 3652 3167 6 1046 323 373 33 25 chr15 60471137 60471379 -43023595 - RLTR14-int LTR ERV1 -3273 4505 4262 6 1046 1983 207 67 12 chr15 60471892 60472488 -43022486 - RMER19A LTR ERVK 0 737 1 6 1046 485 316 73 37 chr15 60473048 60473683 -43021291 - RLTR14-int LTR ERV1 -3448 1615 820 6 1046 267 195 60 83 chr15 60473991 60474075 -43020899 - RLTR14-int LTR ERV1 -4789 528 447 6 1046 575 322 96 57 chr15 60474329 60474734 -43020240 - RLTR14-int LTR ERV1 -4895 422 2 6 1046 798 284 130 52 chr15 60474734 60474872 -43020102 - RLTR14 LTR ERV1 0 382 246 6 1046 333 0 0 0 chr15 60474872 60474909 -43020065 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1046 798 284 130 52 chr15 60474909 60475116 -43019858 - RLTR14 LTR ERV1 -137 245 11 6 1046 399 335 62 21 chr15 60475238 60475430 -43019544 - MIRb SINE MIR -16 252 53 6 1046 675 323 81 48 chr15 60475752 60476309 -43018665 + L1MC4 LINE L1 7468 8042 0 6 1046 21 0 0 0 chr15 60476365 60476386 -43018588 + AT_rich Low_complexity Low_complexity 1 21 0 6 1046 313 325 75 0 chr15 60476818 60476898 -43018076 + B4A SINE B4 1 86 -206 6 1046 210 256 21 85 chr15 60477061 60477155 -43017819 + RSINE1 SINE B4 78 165 0 6 1046 1170 0 0 0 chr15 60477171 60477301 -43017673 + (GGGAGA)n Simple_repeat Simple_repeat 3 132 0 6 1046 1546 89 0 13 chr15 60477301 60477517 -43017457 + L1_Mm LINE L1 5000 5242 -904 6 1046 330 26 0 0 chr15 60479759 60479798 -43015176 + (TC)n Simple_repeat Simple_repeat 2 40 0 6 1046 391 346 50 67 chr15 60479963 60480263 -43014711 + MER63B DNA AcHobo 137 431 -5 6 1046 309 324 47 33 chr15 60480272 60480422 -43014552 + MIRb SINE MIR 2 153 -115 6 1046 318 342 112 28 chr15 60480697 60480983 -43013991 - L2 LINE L2 -445 2974 2665 6 1046 582 171 225 0 chr15 60481295 60481406 -43013568 + B1_Mur4 SINE Alu 2 137 -13 6 1046 255 61 0 0 chr15 60481410 60481443 -43013531 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 6 1046 463 151 11 11 chr15 60481961 60482055 -43012919 + GA-rich Low_complexity Low_complexity 3 96 0 6 1046 6750 88 82 0 chr15 60482416 60483566 -43011408 + L1_Mus3 LINE L1 5394 6637 -1 6 1046 402 39 0 0 chr15 60483573 60483625 -43011349 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 1046 225 309 10 40 chr15 60483836 60483937 -43011037 + MLT1A1 LTR MaLR 278 375 -33 6 1046 198 0 0 0 chr15 60483940 60483962 -43011012 + (TTG)n Simple_repeat Simple_repeat 2 23 0 6 1046 201 250 0 19 chr15 60485253 60485306 -43009668 + CT-rich Low_complexity Low_complexity 3 54 0 6 1046 1138 112 16 11 chr15 60485498 60485712 -43009262 - L1_Mus3 LINE L1 0 6638 6448 6 1046 516 323 164 40 chr15 60486894 60487217 -43007757 + MLT1A0 LTR MaLR 1 363 -2 6 1046 875 311 91 38 chr15 60487403 60487980 -43006994 + Tigger7 DNA MER2_type 39 641 -64 6 1046 296 279 0 0 chr15 60488333 60488412 -43006562 - L1MA6 LINE L1 -34 6266 6188 6 1046 1201 241 53 30 chr15 60488429 60488732 -43006242 - MTEb LTR MaLR -10 369 60 6 1046 320 356 52 0 chr15 60489741 60489856 -43005118 + B1F1 SINE Alu 9 129 -20 6 1046 3624 25 2 2 chr15 60490095 60490491 -43004483 + MTA_Mm LTR MaLR 1 396 0 6 1046 23 0 0 0 chr15 60490847 60490870 -43004104 + AT_rich Low_complexity Low_complexity 1 23 0 6 1046 252 143 0 0 chr15 60491525 60491567 -43003407 + (A)n Simple_repeat Simple_repeat 1 42 0 6 1046 288 304 87 0 chr15 60491645 60491714 -43003260 - ID4_ SINE ID -7 76 2 6 1046 798 185 7 0 chr15 60491739 60491874 -43003100 - ORR1B2 LTR MaLR 0 367 232 6 1046 368 295 84 98 chr15 60492780 60493115 -43001859 + MER102a DNA MER1_type 1 330 0 6 1046 375 200 10 69 chr15 60493120 60493222 -43001752 + MLT1J2 LTR MaLR 353 448 0 6 1046 2040 112 28 22 chr15 60493486 60493806 -43001168 + RLTRETN_Mm LTR ERVK 1 322 0 6 1046 512 329 74 39 chr15 60493850 60494160 -43000814 + ORR1E LTR MaLR 22 342 -17 6 1046 429 317 37 27 chr15 60494186 60494374 -43000600 - MLT2C2 LTR ERVL -255 209 20 6 1046 230 349 0 19 chr15 60494668 60494776 -43000198 + (CATA)n Simple_repeat Simple_repeat 1 106 0 6 1046 632 251 22 17 chr15 60494776 60494954 -43000020 + L1MA10 LINE L1 6153 6331 -3 6 1046 380 327 98 18 chr15 60495269 60495493 -42999481 - Lx8 LINE L1 0 7473 7232 6 1046 3951 180 117 14 chr15 60495640 60496447 -42998527 + RMER19B LTR ERVK 1 890 -12 7 1046 206 289 140 28 chr15 60497084 60497262 -42997712 + MIR SINE MIR 35 232 -30 7 1046 212 361 0 0 chr15 60497473 60497534 -42997440 - ID4_ SINE ID -2 81 21 7 1046 329 167 125 0 chr15 60498005 60498077 -42996897 - MTC LTR MaLR 0 421 341 7 1046 372 65 53 32 chr15 60498077 60498172 -42996802 + (TTTTTG)n Simple_repeat Simple_repeat 5 101 0 7 1046 1073 38 114 0 chr15 60498172 60498304 -42996670 - B1_Mm SINE Alu 0 147 1 7 1046 1811 157 42 67 chr15 60498304 60498541 -42996433 - MTC LTR MaLR -72 349 121 7 1046 8722 33 0 5 chr15 60498541 60499514 -42995460 + L1Md_T LINE L1 5615 6582 0 7 1046 1811 157 42 67 chr15 60499514 60499632 -42995342 - MTC LTR MaLR -301 120 3 7 1046 1137 76 14 14 chr15 60500068 60500214 -42994760 - B1_Mus2 SINE Alu -1 146 1 1 1046 322 257 25 58 chr15 60500247 60500367 -42994607 + L1MD3 LINE L1 7837 7952 -43 2 1046 2491 148 91 16 chr15 60500398 60500659 -42994315 + RMER6B LTR ERVK 3 295 -166 3 1046 315 0 0 0 chr15 60500659 60500694 -42994280 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1046 2491 148 91 16 chr15 60500694 60500859 -42994115 + RMER6B LTR ERVK 296 461 0 3 1046 335 252 46 61 chr15 60501098 60501229 -42993745 - MLT1A1 LTR MaLR -1 407 279 5 1046 1480 204 62 0 chr15 60501337 60501641 -42993333 + MTC LTR MaLR 1 323 -98 6 1046 2675 215 37 7 chr15 60501703 60502152 -42992822 + RLTR20B2 LTR ERVK 1 452 -108 7 1046 429 81 0 0 chr15 60502152 60502214 -42992760 + (TG)n Simple_repeat Simple_repeat 2 63 0 8 1046 2675 215 37 7 chr15 60502214 60502308 -42992666 + RLTR20B2 LTR ERVK 453 559 -1 7 1046 651 286 93 23 chr15 60502541 60502756 -42992218 - B4A SINE B4 -62 230 1 9 1046 429 145 29 0 chr15 60503870 60503939 -42991035 - ORR1D1 LTR MaLR 0 384 314 1 1046 337 302 60 42 chr15 60503991 60504025 -42990949 - ORR1D1 LTR MaLR -40 334 301 1 1046 697 100 9 35 chr15 60504025 60504139 -42990835 - L1_Mus1 LINE L1 0 6567 6457 1 1046 438 246 84 38 chr15 60504139 60504270 -42990704 - ORR1D1 LTR MaLR -76 302 166 1 1046 369 149 0 0 chr15 60504303 60504370 -42990604 + (GA)n Simple_repeat Simple_repeat 2 68 0 1 1046 638 240 42 100 chr15 60504370 60504471 -42990503 - ORR1D1 LTR MaLR -193 181 92 1 1046 405 0 0 0 chr15 60504471 60504516 -42990458 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1046 638 240 42 100 chr15 60504516 60504604 -42990370 - ORR1D1 LTR MaLR -283 91 3 1 1046 252 77 0 0 chr15 60504709 60504748 -42990226 + (TTGG)n Simple_repeat Simple_repeat 1 39 0 1 1046 22 0 0 0 chr15 60504748 60504770 -42990204 + AT_rich Low_complexity Low_complexity 1 22 0 1 1046 313 294 65 115 chr15 60505241 60505441 -42989533 - LTR48B LTR ERV1 -20 624 435 1 1046 231 246 130 0 chr15 60505590 60505659 -42989315 - MER34 LTR ERV1 -464 78 1 1 1046 5573 110 24 0 chr15 60505687 60506596 -42988378 + Lx2 LINE L1 5472 6402 -595 1 1046 6395 95 41 8 chr15 60506589 60507490 -42987484 + Lx LINE L1 5722 6652 -2 1 1046 273 274 29 81 chr15 60508979 60509103 -42985871 + MIRc SINE MIR 47 169 -107 2 1046 242 200 0 0 chr15 60510097 60510147 -42984827 + (TCTG)n Simple_repeat Simple_repeat 1 50 0 2 1046 256 308 40 40 chr15 60510220 60510345 -42984629 - MIRb SINE MIR -63 205 81 2 1046 297 292 83 0 chr15 60510362 60510434 -42984540 - ID4 SINE ID -4 79 2 2 1046 379 271 61 54 chr15 60510876 60510916 -42984058 - MLT1B LTR MaLR -57 333 294 2 1046 3620 20 13 0 chr15 60510916 60511307 -42983667 + MTA_Mm LTR MaLR 1 396 0 2 1046 379 271 61 54 chr15 60511307 60511414 -42983560 - MLT1B LTR MaLR -97 293 186 2 1046 396 0 0 0 chr15 60511438 60511482 -42983492 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1046 629 266 143 40 chr15 60511526 60511827 -42983147 + Lx8 LINE L1 7135 7466 -7 2 1046 922 136 11 11 chr15 60511838 60512016 -42982958 + GA-rich Low_complexity Low_complexity 2 179 0 2 1046 198 152 105 25 chr15 60512634 60512713 -42982261 - L2a LINE L2 -14 3412 3286 2 1046 357 43 0 0 chr15 60512949 60512996 -42981978 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1046 225 119 0 0 chr15 60512998 60513040 -42981934 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 1046 264 333 192 6 chr15 60513200 60513372 -42981602 + MLT1C LTR MaLR 260 463 -4 3 1046 232 308 117 16 chr15 60513372 60513560 -42981414 + L1MD3 LINE L1 7775 7981 -14 3 1046 260 301 92 98 chr15 60514051 60514235 -42980739 + RLTR24 LTR ERV1 6 188 -341 3 1046 302 359 104 14 chr15 60514256 60514400 -42980574 + RLTR24 LTR ERV1 287 443 -86 3 1046 932 286 86 92 chr15 60514440 60514795 -42980179 - ORR1E LTR MaLR -5 414 8 3 1046 205 333 67 0 chr15 60514910 60514985 -42979989 + MIRb SINE MIR 125 204 -64 3 1046 282 95 0 0 chr15 60515028 60515070 -42979904 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1046 432 86 0 0 chr15 60515738 60515808 -42979166 + (TTTTG)n Simple_repeat Simple_repeat 2 71 0 3 1046 333 377 23 8 chr15 60515993 60516124 -42978850 + ID_B1 SINE B4 88 220 -4 3 1046 1088 267 44 70 chr15 60516148 60516535 -42978439 + RMER5 LTR ERV1 3 379 -155 4 1046 6734 77 85 19 chr15 60516535 60517258 -42977716 - L1VL2 LINE L1 -1604 2011 1213 4 1046 2944 89 0 5 chr15 60517258 60517644 -42977330 - L1_Mus4 LINE L1 0 6636 6253 4 1046 6734 86 49 33 chr15 60517644 60518741 -42976233 - L1VL2 LINE L1 -2403 1212 127 4 1046 742 208 23 23 chr15 60518744 60518916 -42976058 + RMER5 LTR ERV1 363 534 0 4 1046 231 345 109 22 chr15 60518939 60519123 -42975851 - MIR SINE MIR -41 221 22 4 1046 1011 55 0 0 chr15 60519175 60519302 -42975672 - B1_Mus1 SINE Alu -21 127 1 4 1046 231 36 0 0 chr15 60519654 60519682 -42975292 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1046 568 45 56 0 chr15 60519697 60519786 -42975188 + (TATAA)n Simple_repeat Simple_repeat 5 98 0 4 1046 10204 144 36 28 chr15 60520221 60522150 -42972824 + L1_Mur2 LINE L1 1396 3339 -2538 4 1046 3331 171 19 51 chr15 60522133 60522799 -42972175 + L1_Mur2 LINE L1 4349 4993 -884 4 1046 4380 202 117 20 chr15 60522797 60523758 -42971216 + Lx5 LINE L1 5997 7050 0 4 1046 24 32 0 0 chr15 60524145 60524176 -42970798 + AT_rich Low_complexity Low_complexity 1 31 0 4 1046 311 341 125 46 chr15 60524405 60524645 -42970329 - MamGypLTR3 LTR Gypsy -36 803 545 5 1046 2774 228 52 11 chr15 60526930 60527568 -42967406 - Lx9 LINE L1 -361 7283 6620 5 1046 827 144 100 71 chr15 60527568 60527807 -42967167 + Lx9 LINE L1 7399 7644 0 5 1046 345 126 0 38 chr15 60527831 60527889 -42967085 + PB1D9 SINE Alu 5 60 -90 5 1046 245 0 0 160 chr15 60527891 60528016 -42966958 + (CAGAG)n Simple_repeat Simple_repeat 1 105 0 5 1046 677 131 9 36 chr15 60528019 60528130 -42966844 + B1_Mur4 SINE Alu 43 150 0 5 1046 189 175 48 48 chr15 60528421 60528463 -42966511 + L2b LINE L2 3319 3360 -15 5 1046 462 352 22 11 chr15 60529041 60529222 -42965752 - MLT1E2 LTR MaLR -169 458 276 5 1046 1074 234 56 4 chr15 60529351 60529600 -42965374 - B4A SINE B4 -30 262 1 5 1046 207 0 0 0 chr15 60530150 60530173 -42964801 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 1046 188 301 80 43 chr15 60531595 60531758 -42963216 - L2a LINE L2 -67 3359 3191 5 1046 441 304 32 81 chr15 60532073 60532259 -42962715 + MLT1E2 LTR MaLR 341 517 -110 6 1046 234 262 47 23 chr15 60532297 60532383 -42962591 + ID_B1 SINE B4 129 216 -8 6 1046 247 62 40 40 chr15 60532393 60532443 -42962531 + (CAGAGA)n Simple_repeat Simple_repeat 3 52 0 6 1046 785 144 12 12 chr15 60532468 60532630 -42962344 + GA-rich Low_complexity Low_complexity 1 162 0 6 1046 330 273 12 0 chr15 60532631 60532752 -42962222 + MLT1E2 LTR MaLR 421 627 0 6 1046 914 123 6 0 chr15 60532787 60532949 -42962025 + (TC)n Simple_repeat Simple_repeat 2 164 0 6 1046 618 281 37 0 chr15 60533379 60533514 -42961460 - RSINE1 SINE B4 -18 147 8 6 1046 349 258 71 10 chr15 60533582 60533680 -42961294 - RSINE1 SINE B4 -36 129 26 6 1046 759 66 0 0 chr15 60533700 60533806 -42961168 + (TC)n Simple_repeat Simple_repeat 1 106 0 6 1046 2506 240 242 19 chr15 60533818 60534655 -42960319 - RMER1A Other Other -6 1024 1 6 1046 456 314 148 14 chr15 60534657 60534880 -42960094 - RMER1A Other Other -777 253 1 6 1046 1292 192 156 20 chr15 60534876 60535178 -42959796 - RMER1B Other Other -680 386 44 7 1046 346 266 45 30 chr15 60535678 60535810 -42959164 - L1MB3 LINE L1 -45 6138 6005 7 1046 378 0 0 0 chr15 60536000 60536042 -42958932 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1046 585 0 0 0 chr15 60536081 60536146 -42958828 + (TTTTC)n Simple_repeat Simple_repeat 2 66 0 7 1046 540 0 0 0 chr15 60536262 60536322 -42958652 + (TC)n Simple_repeat Simple_repeat 1 60 0 7 1046 1317 41 0 0 chr15 60536386 60536558 -42958416 + (TTC)n Simple_repeat Simple_repeat 3 174 0 7 1046 250 325 55 16 chr15 60536825 60536953 -42958021 + L2a LINE L2 3241 3373 -53 7 1046 580 287 116 11 chr15 60536953 60537143 -42957831 - MER20 DNA MER1_type 0 219 10 7 1046 201 74 0 0 chr15 60537275 60537302 -42957672 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 7 1046 568 217 8 23 chr15 60537762 60537894 -42957080 - MamRep137 DNA TcMar? -185 259 130 7 1046 294 98 0 0 chr15 60538128 60538179 -42956795 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 8 1046 238 333 52 31 chr15 60538365 60538461 -42956513 - B4 SINE B4 -193 99 2 8 1046 689 225 14 7 chr15 60538495 60538634 -42956340 + B1_Mur1 SINE Alu 2 141 -8 8 1046 729 63 0 0 chr15 60538665 60538760 -42956214 + (GGAA)n Simple_repeat Simple_repeat 3 97 0 8 1046 1530 301 85 37 chr15 60538815 60539884 -42955090 + L1MB8 LINE L1 4681 5801 -383 8 1046 266 308 75 21 chr15 60539941 60540180 -42954794 + L1MB8 LINE L1 5905 6156 -22 8 1046 253 329 0 0 chr15 60540469 60540539 -42954435 + ID2 SINE ID 12 81 -2 8 1046 33 0 0 0 chr15 60540620 60540653 -42954321 + AT_rich Low_complexity Low_complexity 1 33 0 8 1046 24 67 0 0 chr15 60540855 60540900 -42954074 + AT_rich Low_complexity Low_complexity 1 45 0 8 1046 203 176 0 0 chr15 60540901 60540935 -42954039 + (TG)n Simple_repeat Simple_repeat 1 34 0 8 1046 1460 115 22 13 chr15 60540945 60541174 -42953800 + L1_Mus3 LINE L1 6408 6638 0 8 1046 244 259 0 86 chr15 60541184 60541277 -42953697 + L1MC LINE L1 4459 4543 -1603 9 1046 503 273 142 24 chr15 60541324 60541493 -42953481 + B4A SINE B4 21 209 -83 9 1046 593 258 12 43 chr15 60541550 60541712 -42953262 - B4A SINE B4 -119 173 17 9 1046 231 36 0 0 chr15 60541721 60541749 -42953225 + (TG)n Simple_repeat Simple_repeat 1 28 0 9 1046 604 248 13 38 chr15 60541749 60541897 -42953077 - RSINE1 SINE B4 -17 148 5 9 1046 880 306 73 20 chr15 60542639 60542996 -42951978 + MLT1B LTR MaLR 4 379 -11 9 1046 25 65 0 0 chr15 60543445 60543491 -42951483 + AT_rich Low_complexity Low_complexity 1 46 0 9 1046 402 246 0 0 chr15 60544633 60544747 -42950227 + (GGATG)n Simple_repeat Simple_repeat 5 118 0 9 1046 841 259 78 36 chr15 60544835 60545167 -42949807 - RLTR15 LTR ERVK -12 347 2 9 1046 318 26 0 0 chr15 60545213 60545252 -42949722 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 9 1046 29 28 0 0 chr15 60545791 60545827 -42949147 + AT_rich Low_complexity Low_complexity 1 36 0 1 1046 838 190 14 27 chr15 60547496 60547642 -42947332 + B1_Mur4 SINE Alu 1 144 -6 1 1046 6458 142 38 8 chr15 60547644 60549187 -42945787 + Lx LINE L1 5071 6654 0 1 1046 279 57 75 0 chr15 60549201 60549254 -42945720 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 1 1046 365 283 134 52 chr15 60549259 60549669 -42945305 - L1MD3 LINE L1 -48 7947 7526 1 1046 1671 109 21 4 chr15 60549669 60549909 -42945065 - Lx LINE L1 0 6654 6411 1 1046 365 291 117 74 chr15 60549909 60550074 -42944900 - L1MD3 LINE L1 -470 7525 7370 1 1046 4108 187 57 34 chr15 60550579 60551461 -42943513 - RMER19B LTR ERVK 0 902 1 1 1046 1122 84 0 0 chr15 60551463 60551618 -42943356 + (TA)n Simple_repeat Simple_repeat 2 156 0 1 1046 23 0 0 0 chr15 60552265 60552288 -42942686 + AT_rich Low_complexity Low_complexity 1 23 0 1 1046 21 57 0 0 chr15 60552337 60552372 -42942602 + AT_rich Low_complexity Low_complexity 1 35 0 1 1046 239 250 33 107 chr15 60552395 60552428 -42942546 + Cheshire DNA MER1_type 2300 2327 -93 1 1046 961 286 170 6 chr15 60552428 60552752 -42942222 - MTEa LTR MaLR -2 377 1 1 1046 239 250 33 107 chr15 60552752 60552839 -42942135 + Cheshire DNA MER1_type 2328 2411 -9 1 1046 995 219 25 10 chr15 60552892 60553095 -42941879 - B3 SINE B2 -6 210 5 1 1046 326 58 39 0 chr15 60553109 60553161 -42941813 + (TTTTG)n Simple_repeat Simple_repeat 1 54 0 1 1046 365 327 9 18 chr15 60553161 60553273 -42941701 - PB1D10 SINE Alu 0 117 7 1 1046 268 274 58 102 chr15 60553304 60553487 -42941487 + MIRb SINE MIR 55 219 -49 1 1046 234 179 29 15 chr15 60553948 60554016 -42940958 + (TTATA)n Simple_repeat Simple_repeat 4 72 0 1 1046 415 320 63 69 chr15 60554174 60554509 -42940465 - ORR1D1 LTR MaLR -36 338 6 1 1046 336 309 11 11 chr15 60554597 60554692 -42940282 + MTE2a LTR MaLR 1 95 -284 1 1046 974 294 39 39 chr15 60554696 60555004 -42939970 + MTE2a LTR MaLR 58 365 -14 1 130 1439 263 143 16 chr15 60555026 60555664 -42939310 - L1MA5 LINE L1 0 6300 5582 1 1047 279 324 17 43 chr15 60556144 60556260 -42938714 + ID_B1 SINE B4 101 213 -11 1 1047 264 313 15 0 chr15 60556284 60556351 -42938623 + ID4_ SINE ID 15 82 -1 1 1047 1107 109 0 0 chr15 60556378 60556543 -42938431 + (GGAA)n Simple_repeat Simple_repeat 4 168 0 1 1047 383 347 137 47 chr15 60556951 60557293 -42937681 + MER21B LTR ERV1 365 737 -126 1 1047 660 350 107 60 chr15 60558069 60558510 -42936464 - MER21B LTR ERV1 -129 734 291 1 1047 670 278 77 0 chr15 60558510 60558704 -42936270 + B3 SINE B2 4 212 -4 1 1047 660 350 107 60 chr15 60558704 60558830 -42936144 - MER21B LTR ERV1 -573 290 140 1 1047 501 17 0 0 chr15 60559721 60559779 -42935195 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 1047 415 333 105 79 chr15 60559785 60560052 -42934922 - B4 SINE B4 -17 275 2 1 1047 450 128 0 11 chr15 60561182 60561277 -42933697 + Lx3_Mus LINE L1 6916 7009 0 1 1047 273 146 0 0 chr15 60561295 60561343 -42933631 + (GGA)n Simple_repeat Simple_repeat 2 49 0 1 1047 3782 71 0 0 chr15 60562573 60563049 -42931925 - L1_Mus2 LINE L1 -382 6184 5709 1 1047 1596 96 3 165 chr15 60563049 60563412 -42931562 - L1_Mur1 LINE L1 -581 5305 5002 1 1047 6324 123 30 3 chr15 60563412 60564404 -42930570 + Lx3B LINE L1 5954 6972 -1 1 1047 300 294 92 18 chr15 60565266 60565429 -42929545 + HAL1 LINE L1 9 183 -2324 1 1047 240 86 0 0 chr15 60565549 60565584 -42929390 + (CAAAA)n Simple_repeat Simple_repeat 4 38 0 1 1047 326 292 80 0 chr15 60566245 60566358 -42928616 + HAL1 LINE L1 692 813 -1694 1 1047 215 179 18 18 chr15 60566673 60566730 -42928244 + A-rich Low_complexity Low_complexity 2 58 0 1 1047 695 268 113 5 chr15 60566839 60567034 -42927940 + B3 SINE B2 1 216 0 1 1047 279 0 0 0 chr15 60567144 60567175 -42927799 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 1 1047 467 337 20 30 chr15 60567362 60567561 -42927413 - MLT1A0 LTR MaLR -4 361 165 1 1047 592 279 73 63 chr15 60567796 60568083 -42926891 + B4 SINE B4 3 292 0 1 1047 918 138 0 0 chr15 60568099 60568353 -42926621 + (CA)n Simple_repeat Simple_repeat 1 254 0 1 1047 1173 88 0 0 chr15 60569274 60569421 -42925553 + B1_Mus1 SINE Alu 1 147 -1 1 1047 34 24 0 0 chr15 60569422 60569463 -42925511 + AT_rich Low_complexity Low_complexity 1 41 0 1 1047 238 246 33 0 chr15 60569583 60569644 -42925330 + HAL1 LINE L1 2445 2507 0 1 1047 214 253 157 0 chr15 60570371 60570449 -42924525 + PB1 SINE Alu 1 91 -36 1 1047 215 324 0 0 chr15 60570449 60570523 -42924451 + ID4 SINE ID 2 75 -8 1 1047 1785 135 62 3 chr15 60571968 60572273 -42922701 + ORR1A2 LTR MaLR 5 327 0 1 1047 235 319 0 60 chr15 60572578 60572701 -42922273 - PB1D9 SINE Alu -11 138 29 1 1047 1150 81 0 13 chr15 60574924 60575074 -42919900 - B1_Mus1 SINE Alu 0 148 1 1 1047 629 101 0 10 chr15 60576510 60576610 -42918364 + (GA)n Simple_repeat Simple_repeat 2 100 0 1 1047 294 123 0 0 chr15 60578776 60578833 -42916141 + (A)n Simple_repeat Simple_repeat 1 57 0 1 1047 212 253 57 57 chr15 60579265 60579353 -42915621 + B4 SINE B4 2 89 -203 1 1047 287 264 41 98 chr15 60579650 60579772 -42915202 - PB1D10 SINE Alu 0 117 3 1 1047 189 25 23 91 chr15 60580973 60581017 -42913957 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 1047 283 331 83 0 chr15 60581364 60581533 -42913441 + RMER15 LTR ERVL 392 574 -1 1 1047 254 361 40 29 chr15 60584949 60585123 -42909851 + RMER4A LTR ERVK 6 181 -285 1 1047 230 310 38 48 chr15 60585748 60585853 -42909121 + MLT1A LTR MaLR 269 372 -2 1 1047 180 0 0 0 chr15 60587013 60587033 -42907941 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1 1047 490 294 96 20 chr15 60587094 60587292 -42907682 + ORR1E LTR MaLR 4 216 -143 1 1047 549 274 242 44 chr15 60587804 60588157 -42906817 + Lx8 LINE L1 7047 7469 -4 1 1047 1417 244 71 14 chr15 60588251 60588601 -42906373 + ORR1D2 LTR MaLR 1 370 0 1 1047 235 361 32 55 chr15 60588725 60588942 -42906032 - MIR SINE MIR -44 218 7 1 1047 432 97 0 0 chr15 60589045 60589107 -42905867 + (T)n Simple_repeat Simple_repeat 1 62 0 1 1047 243 253 22 28 chr15 60589107 60589197 -42905777 - RMER17C LTR ERVK -137 273 185 1 1047 1232 50 0 6 chr15 60589197 60589358 -42905616 + (GGGAA)n Simple_repeat Simple_repeat 1 160 0 1 1047 243 253 22 28 chr15 60589358 60589446 -42905528 - RMER17C LTR ERVK -226 184 96 1 1047 557 88 9 29 chr15 60589554 60589659 -42905315 + (TATATG)n Simple_repeat Simple_repeat 5 107 0 1 1047 234 0 0 0 chr15 60589696 60589722 -42905252 + (TATAA)n Simple_repeat Simple_repeat 4 29 0 1 1047 362 319 114 80 chr15 60589753 60590015 -42904959 - MLT1E2 LTR MaLR -313 314 44 1 1047 1203 208 99 0 chr15 60590191 60590485 -42904489 - ORR1C2 LTR MaLR -1 383 61 1 1047 206 293 0 26 chr15 60592407 60592484 -42902490 + (TAAA)n Simple_repeat Simple_repeat 3 77 0 1 1047 208 238 0 0 chr15 60592412 60592454 -42902520 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 1 1047 207 0 0 0 chr15 60593458 60593481 -42901493 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1047 411 317 108 19 chr15 60593761 60593973 -42901001 - MLT1J2 LTR MaLR -205 243 13 1 1047 272 307 23 0 chr15 60595066 60595154 -42899820 + MER81 DNA AcHobo 10 99 -15 1 1047 307 311 113 65 chr15 60595261 60595570 -42899404 - RMER10A LTR ERVL 0 442 119 1 1047 2172 150 71 3 chr15 60596644 60597012 -42897962 - ORR1B1 LTR MaLR -1 393 1 1 1047 239 361 36 10 chr15 60597025 60597221 -42897753 - L1MD3 LINE L1 -2 7993 7793 1 1047 490 332 51 5 chr15 60597566 60597763 -42897211 - L1MD3 LINE L1 -194 7801 7596 1 1047 270 132 296 42 chr15 60598291 60598362 -42896612 + B4 SINE B4 7 95 -197 1 1047 216 0 0 0 chr15 60598520 60598544 -42896430 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1047 41 21 0 0 chr15 60599247 60599295 -42895679 + AT_rich Low_complexity Low_complexity 1 48 0 1 1047 327 25 0 0 chr15 60600326 60600366 -42894608 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1047 1279 108 0 11 chr15 60601119 60601307 -42893667 - B2_Mm2 SINE B2 -5 190 5 1 1047 256 260 0 14 chr15 60601394 60601468 -42893506 - L1MA4 LINE L1 -373 5927 5855 1 1047 887 19 110 18 chr15 60603242 60603405 -42891569 + (TTTCC)n Simple_repeat Simple_repeat 2 179 0 1 1047 477 0 0 0 chr15 60603419 60603472 -42891502 + (TTTTA)n Simple_repeat Simple_repeat 2 54 0 1 1047 989 123 0 0 chr15 60603472 60603610 -42891364 - B1_Mus1 SINE Alu -10 138 1 1 1047 8420 43 1 5 chr15 60604705 60606403 -42888571 - L1Md_F2 LINE L1 -7 6575 4886 1 1047 262 246 15 0 chr15 60606663 60606728 -42888246 - ID4_ SINE ID -13 70 5 1 1047 279 130 0 0 chr15 60607584 60607638 -42887336 + (TTGG)n Simple_repeat Simple_repeat 4 57 0 1 1047 216 372 94 28 chr15 60608116 60608329 -42886645 - B4A SINE B4 -16 276 50 1 1047 196 136 0 48 chr15 60609386 60609448 -42885526 + T-rich Low_complexity Low_complexity 4 62 0 1 1047 451 311 0 0 chr15 60609459 60609581 -42885393 - ID_B1 SINE B4 -1 223 102 1 1047 31 44 0 0 chr15 60609889 60609934 -42885040 + AT_rich Low_complexity Low_complexity 1 45 0 1 1047 1019 39 0 0 chr15 60610146 60610274 -42884700 - MTB LTR MaLR 0 400 273 1 1047 2024 65 4 0 chr15 60610983 60611259 -42883715 - MTB LTR MaLR -123 277 1 1 1047 1137 82 0 7 chr15 60611887 60612035 -42882939 + B1_Mus2 SINE Alu 1 147 0 1 1047 445 45 11 54 chr15 60612038 60612131 -42882843 + (CAAAA)n Simple_repeat Simple_repeat 2 90 0 1 1047 803 243 44 35 chr15 60612172 60612398 -42882576 + MTE2b LTR MaLR 151 378 -1 1 1047 426 39 0 0 chr15 60613504 60613556 -42881418 + (TTG)n Simple_repeat Simple_repeat 2 53 0 1 1047 189 312 45 18 chr15 60613558 60613669 -42881305 + MIRc SINE MIR 140 253 -15 1 1047 345 274 28 64 chr15 60614054 60614163 -42880811 - ORR1E LTR MaLR -230 129 25 1 1047 512 330 32 45 chr15 60614318 60614565 -42880409 + MLT1E3 LTR MaLR 380 623 -1 2 1047 1235 293 134 76 chr15 60614604 60615293 -42879681 + L1M4 LINE L1 401 1181 -5723 2 1047 186 43 0 0 chr15 60615293 60615316 -42879658 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1047 675 67 0 0 chr15 60615316 60615404 -42879570 + (GA)n Simple_repeat Simple_repeat 2 90 0 2 1047 1235 300 117 71 chr15 60615404 60615935 -42879039 + L1M4 LINE L1 1182 1646 -5688 2 1047 254 315 156 9 chr15 60615946 60616055 -42878919 + ID_B1 SINE B4 93 217 -7 2 1047 297 265 38 34 chr15 60616060 60616260 -42878714 + L1M4 LINE L1 1647 1887 -5017 2 1047 743 285 94 45 chr15 60616240 60616427 -42878547 + L1M4 LINE L1 4496 4691 -2315 2 1047 1713 164 101 52 chr15 60616427 60616775 -42878199 - ORR1B2 LTR MaLR 0 367 3 2 1047 743 285 94 45 chr15 60616775 60617116 -42877858 + L1M4 LINE L1 4692 5050 -1956 2 1047 1193 270 133 19 chr15 60617557 60618233 -42876741 + L1M4 LINE L1 5231 5983 -1023 2 1047 305 288 32 9 chr15 60618287 60618406 -42876568 + L1M4 LINE L1 6525 6667 -371 2 1047 376 298 9 9 chr15 60618472 60618587 -42876387 + PB1D10 SINE Alu 3 117 0 2 1047 246 307 172 7 chr15 60619038 60619189 -42875785 - MIRb SINE MIR -75 193 18 2 1047 651 13 0 0 chr15 60619450 60619526 -42875448 + (TG)n Simple_repeat Simple_repeat 1 76 0 2 1047 904 120 11 28 chr15 60620159 60620339 -42874635 + T-rich Low_complexity Low_complexity 4 180 0 2 1047 795 277 50 155 chr15 60620341 60620474 -42874500 + MTD LTR MaLR 20 125 -294 2 1047 756 245 34 24 chr15 60620474 60620679 -42874295 - B3 SINE B2 -5 211 5 2 1047 795 277 50 155 chr15 60620679 60620925 -42874049 + MTD LTR MaLR 126 359 -60 2 1047 367 308 16 33 chr15 60621003 60621124 -42873850 + MIRb SINE MIR 89 207 -61 2 1047 2522 130 63 47 chr15 60621201 60621524 -42873450 + RMER6A LTR ERVK 1 321 -435 2 1047 420 122 0 0 chr15 60621524 60621606 -42873368 + (CAGA)n Simple_repeat Simple_repeat 1 82 0 2 1047 2522 143 79 40 chr15 60621606 60621924 -42873050 + RMER6A LTR ERVK 322 689 -1 2 1047 428 318 61 35 chr15 60621924 60622155 -42872819 + MLT1C LTR MaLR 69 305 -162 2 1047 680 293 57 48 chr15 60622398 60622731 -42872243 - MLT1A LTR MaLR -4 370 35 2 1047 282 312 34 78 chr15 60623024 60623229 -42871745 + MIR SINE MIR 66 261 -1 2 1047 7628 22 2 7 chr15 60623780 60624668 -42870306 - L1Md_T LINE L1 0 6582 5730 2 1047 276 232 47 47 chr15 60625057 60625143 -42869831 + MIRb SINE MIR 81 166 -102 2 1047 552 311 62 123 chr15 60625543 60625975 -42868999 - MTC LTR MaLR -15 406 1 2 1047 1154 208 81 120 chr15 60626074 60626483 -42868491 + RLTR9C LTR ERVK 1 393 0 2 1047 1293 138 24 107 chr15 60626487 60626778 -42868196 + MMETn-int LTR ERVK 3 269 -4575 2 1047 237 284 105 44 chr15 60627106 60627220 -42867754 - ORR1D2 LTR MaLR -207 163 43 2 1047 261 0 0 0 chr15 60627542 60627571 -42867403 + (TC)n Simple_repeat Simple_repeat 2 30 0 2 1047 423 0 0 0 chr15 60627571 60627617 -42867357 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1047 590 183 0 88 chr15 60627617 60627731 -42867243 - B1_Mur3 SINE Alu -43 106 3 2 1047 677 158 6 0 chr15 60627731 60627908 -42867066 + CT-rich Low_complexity Low_complexity 1 178 0 2 1047 207 100 0 0 chr15 60628418 60628448 -42866526 + (TCTG)n Simple_repeat Simple_repeat 4 33 0 2 1047 224 175 53 0 chr15 60628448 60628505 -42866469 - PB1D9 SINE Alu 0 120 61 2 1047 462 108 0 0 chr15 60629160 60629243 -42865731 + (TC)n Simple_repeat Simple_repeat 1 83 0 2 1047 721 153 62 55 chr15 60630218 60630363 -42864611 + B1_Mur4 SINE Alu 5 150 0 2 1047 213 303 66 29 chr15 60630491 60630627 -42864347 + L2a LINE L2 3281 3421 -5 2 1047 814 268 96 18 chr15 60630766 60631047 -42863927 + MLT1B LTR MaLR 1 303 -87 2 1047 328 312 86 23 chr15 60632240 60632414 -42862560 - MER5A DNA MER1_type -4 185 1 2 1047 2358 123 27 56 chr15 60632499 60632980 -42861994 + IAPLTR2_Mm LTR ERVK 1 467 -8 2 1047 59342 9 6 0 chr15 60632981 60639422 -42855552 + IAPEz-int LTR ERVK 1 6481 0 2 1047 2358 123 27 56 chr15 60639422 60639903 -42855071 + IAPLTR2_Mm LTR ERVK 1 467 -8 2 1047 533 311 74 66 chr15 60640000 60640244 -42854730 + MTEa LTR MaLR 79 324 -55 2 1047 315 191 0 0 chr15 60640244 60640307 -42854667 + CT-rich Low_complexity Low_complexity 3 65 0 2 1047 24 53 0 0 chr15 60640654 60640692 -42854282 + AT_rich Low_complexity Low_complexity 1 38 0 2 1047 1201 328 42 31 chr15 60640693 60641306 -42853668 + L1MB5 LINE L1 5554 6173 -1 2 1047 339 25 0 0 chr15 60641752 60641792 -42853182 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1047 370 314 112 0 chr15 60641798 60641967 -42853007 - MER2 DNA MER2_type -150 195 8 2 1047 492 341 31 4 chr15 60642013 60642240 -42852734 - MLT1D LTR MaLR -21 484 252 2 1047 357 170 22 11 chr15 60642305 60642394 -42852580 + GA-rich Low_complexity Low_complexity 3 92 0 2 1047 233 244 141 83 chr15 60643348 60643540 -42851434 - L2b LINE L2 -5 3421 3219 2 1047 180 0 0 0 chr15 60644541 60644561 -42850413 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 1047 24 53 0 0 chr15 60644770 60644808 -42850166 + AT_rich Low_complexity Low_complexity 1 38 0 2 1047 578 171 0 17 chr15 60644845 60644964 -42850010 + GA-rich Low_complexity Low_complexity 4 120 0 2 1047 597 28 0 0 chr15 60645263 60645334 -42849640 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 1047 477 80 0 0 chr15 60647051 60647126 -42847848 + (TCTG)n Simple_repeat Simple_repeat 2 76 0 2 1047 22 0 0 0 chr15 60647380 60647402 -42847572 + AT_rich Low_complexity Low_complexity 1 22 0 2 1047 189 0 0 0 chr15 60649386 60649407 -42845567 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1047 1024 172 10 50 chr15 60650141 60650343 -42844631 + Lx4B LINE L1 6488 6681 -377 2 1047 846 154 147 6 chr15 60650342 60650512 -42844462 + Lx5 LINE L1 6812 7005 -45 2 1047 189 171 0 0 chr15 60651274 60651309 -42843665 + A-rich Low_complexity Low_complexity 1 35 0 2 1047 832 180 230 21 chr15 60652001 60652188 -42842786 - URR1A DNA MER1_type 0 226 1 2 1047 189 0 0 0 chr15 60656949 60656970 -42838004 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2 1047 419 173 27 9 chr15 60657335 60657446 -42837528 + CT-rich Low_complexity Low_complexity 3 115 0 2 1047 381 22 0 0 chr15 60658240 60658286 -42836688 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1047 405 0 0 0 chr15 60658286 60658330 -42836644 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 1047 258 277 22 78 chr15 60658948 60659038 -42835936 - PB1 SINE Alu -5 122 38 2 1047 220 183 32 32 chr15 60659075 60659137 -42835837 + T-rich Low_complexity Low_complexity 1 62 0 2 1047 22 0 0 0 chr15 60659579 60659601 -42835373 + AT_rich Low_complexity Low_complexity 1 22 0 2 1047 185 394 20 0 chr15 60659806 60659905 -42835069 - L2a LINE L2 -223 3203 3103 2 1047 212 313 12 0 chr15 60662245 60662328 -42832646 + L2 LINE L2 2766 2849 -570 2 1047 505 302 93 4 chr15 60663319 60663588 -42831386 + MER33 DNA MER1_type 2 294 -30 2 1047 1458 239 94 0 chr15 60663900 60664281 -42830693 + MTD LTR MaLR 3 419 0 2 1047 528 257 58 17 chr15 60664301 60664475 -42830499 - MLT1A0 LTR MaLR -127 238 58 2 1047 817 159 6 6 chr15 60664733 60664897 -42830077 + CT-rich Low_complexity Low_complexity 3 166 0 2 1047 194 211 35 0 chr15 60666043 60666100 -42828874 + GA-rich Low_complexity Low_complexity 1 59 0 2 1047 462 18 0 0 chr15 60666111 60666166 -42828808 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1047 696 285 43 98 chr15 60666733 60667152 -42827822 + MTE2a LTR MaLR 2 405 -14 2 1047 266 326 78 6 chr15 60667360 60667539 -42827435 + Ricksha_c DNA MuDR 602 793 -1255 2 1047 335 258 30 20 chr15 60667753 60667852 -42827122 - RLTR23 LTR ERV1 0 430 331 2 1047 504 0 0 0 chr15 60668206 60668262 -42826712 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1047 180 0 0 0 chr15 60668262 60668282 -42826692 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1047 395 219 83 111 chr15 60668377 60668557 -42826417 + RMER10A LTR ERVL 263 437 -5 2 1047 24 0 0 0 chr15 60669096 60669120 -42825854 + AT_rich Low_complexity Low_complexity 1 24 0 2 1047 243 274 200 25 chr15 60670707 60670827 -42824147 + MER5A1 DNA MER1_type 2 142 -24 2 1047 747 151 33 3 chr15 60670834 60671140 -42823834 + (TG)n Simple_repeat Simple_repeat 1 315 0 2 1047 694 225 155 6 chr15 60672552 60672726 -42822248 + B3 SINE B2 1 200 -16 2 1047 1118 28 0 21 chr15 60673102 60673247 -42821727 + L1Md_F2 LINE L1 6439 6580 -2 2 1047 2039 171 35 53 chr15 60673827 60674260 -42820714 - RMER10A LTR ERVL -17 425 1 2 1047 507 302 30 36 chr15 60674402 60674570 -42820404 - MER5A DNA MER1_type -22 167 1 2 1047 685 235 208 0 chr15 60674734 60674917 -42820057 + ID_B1 SINE B4 1 221 -3 2 1047 400 317 49 28 chr15 60675363 60675506 -42819468 + MTEa LTR MaLR 174 319 -60 2 1047 810 58 0 0 chr15 60675538 60675642 -42819332 + (GGAA)n Simple_repeat Simple_repeat 4 107 0 2 1047 581 277 135 63 chr15 60678388 60678836 -42816138 - L1MC2 LINE L1 -18 6326 5850 2 1047 233 184 0 75 chr15 60678878 60678931 -42816043 - PB1D10 SINE Alu -22 95 47 2 1047 304 363 83 72 chr15 60678969 60679245 -42815729 + B4 SINE B4 3 281 -11 2 1047 248 137 20 0 chr15 60679278 60679329 -42815645 + (CATATA)n Simple_repeat Simple_repeat 4 55 0 2 1047 372 130 0 0 chr15 60679578 60679647 -42815327 + (TCCA)n Simple_repeat Simple_repeat 4 72 0 2 1047 191 397 13 0 chr15 60680163 60680241 -42814733 - L2c LINE L2 -15 3372 3294 2 1047 261 304 0 89 chr15 60680338 60680450 -42814524 - L2c LINE L2 -16 3371 3270 2 1047 665 180 46 138 chr15 60681499 60681673 -42813301 + RSINE1 SINE B4 8 165 0 2 1047 458 123 44 31 chr15 60681673 60681833 -42813141 + (CA)n Simple_repeat Simple_repeat 1 162 0 2 1047 744 133 40 8 chr15 60681906 60682307 -42812667 + (CA)n Simple_repeat Simple_repeat 1 414 0 2 1047 21 36 0 0 chr15 60682421 60682449 -42812525 + AT_rich Low_complexity Low_complexity 1 28 0 2 1047 199 286 71 0 chr15 60682805 60682875 -42812099 + MIRb SINE MIR 186 260 -8 2 1047 233 311 0 62 chr15 60683861 60683974 -42811000 + PB1D9 SINE Alu 14 119 -1 2 1047 378 0 0 0 chr15 60684101 60684143 -42810831 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 2 1047 590 230 209 17 chr15 60684143 60684320 -42810654 + ID_B1 SINE B4 13 223 -1 3 1047 408 20 0 0 chr15 60684625 60684674 -42810300 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 1047 537 68 0 0 chr15 60685661 60685735 -42809239 + (TTC)n Simple_repeat Simple_repeat 2 75 0 3 1047 257 303 101 0 chr15 60686001 60686090 -42808884 - B1F1 SINE Alu -50 99 2 3 1048 204 321 73 12 chr15 60687354 60687436 -42807538 - L2c LINE L2 -163 3224 3138 3 1048 297 0 0 0 chr15 60687472 60687505 -42807469 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 1048 568 96 35 9 chr15 60687926 60688042 -42806932 + (TAGA)n Simple_repeat Simple_repeat 2 120 0 3 1048 698 303 187 29 chr15 60688098 60688383 -42806591 + MTD LTR MaLR 2 346 -73 3 1048 1987 151 12 61 chr15 60688383 60688729 -42806245 + ORR1A4 LTR MaLR 1 329 0 3 1048 392 264 162 48 chr15 60688729 60688807 -42806167 + MTD LTR MaLR 347 419 0 3 1048 642 49 0 0 chr15 60689014 60689096 -42805878 - L1Md_A LINE L1 0 6582 6501 3 1048 414 316 112 50 chr15 60689168 60689408 -42805566 + MLT1H LTR MaLR 257 511 -38 3 1048 297 51 0 0 chr15 60690219 60690258 -42804716 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 3 1048 880 297 99 31 chr15 60690944 60691367 -42803607 - MLT2B3 LTR ERVL -40 677 167 3 1048 766 256 33 33 chr15 60691517 60691731 -42803243 - B3 SINE B2 0 216 3 3 1048 252 281 25 61 chr15 60691826 60691951 -42803023 - MLT1E1A LTR MaLR -38 642 493 3 1048 287 317 39 19 chr15 60692158 60692261 -42802713 - PB1D10 SINE Alu -12 105 1 3 1048 261 57 0 0 chr15 60692293 60692328 -42802646 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 3 1048 192 273 0 0 chr15 60692346 60692423 -42802551 + (TG)n Simple_repeat Simple_repeat 2 78 0 3 1048 826 250 28 0 chr15 60692829 60693005 -42801969 - B3A SINE B2 -16 182 2 3 1048 306 317 39 19 chr15 60693056 60693159 -42801815 - ID_B1 SINE B4 -21 203 99 3 1048 913 317 104 21 chr15 60693341 60694194 -42800780 - L1MD2 LINE L1 -360 6397 5488 3 1048 573 282 115 35 chr15 60694194 60694569 -42800405 - L1MD2 LINE L1 -4780 1860 1456 3 1048 543 16 0 0 chr15 60694698 60694762 -42800212 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 1048 669 317 67 39 chr15 60694770 60695052 -42799922 - B4 SINE B4 -2 290 1 3 1048 555 322 38 34 chr15 60695289 60695553 -42799421 - MLT1B LTR MaLR -125 265 1 3 1048 826 326 132 11 chr15 60695585 60695713 -42799261 - L1MD2 LINE L1 -5494 1146 1005 3 1048 360 0 0 0 chr15 60695713 60695753 -42799221 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1048 826 308 158 19 chr15 60695753 60696204 -42798770 - L1MD2 LINE L1 -5540 1007 499 3 1048 270 319 70 52 chr15 60696379 60696551 -42798423 - L1MD2 LINE L1 -6345 202 28 3 1048 336 327 42 71 chr15 60697032 60697200 -42797774 - B3A SINE B2 -4 194 32 3 1048 219 212 0 0 chr15 60697820 60697853 -42797121 + PB1D9 SINE Alu 1 33 -87 3 1048 426 39 0 0 chr15 60697993 60698045 -42796929 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1048 512 329 75 40 chr15 60698199 60698573 -42796401 + Charlie7 DNA MER1_type 1736 2122 -490 3 1048 198 313 40 20 chr15 60698890 60698991 -42795983 - MIRb SINE MIR -28 240 138 3 1048 831 226 5 118 chr15 60699520 60699698 -42795276 + B3 SINE B2 1 166 -50 3 1048 438 20 0 0 chr15 60699698 60699749 -42795225 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1048 198 0 0 0 chr15 60699750 60699772 -42795202 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 1048 588 226 5 118 chr15 60699772 60699802 -42795172 + B2_Mm2 SINE B2 162 187 -8 3 1048 198 255 0 0 chr15 60699806 60699853 -42795121 + MIR SINE MIR 105 151 -111 3 1048 416 209 15 218 chr15 60699905 60700107 -42794867 + RMER15 LTR ERVL 1 161 -414 3 1048 2316 162 10 22 chr15 60700183 60700587 -42794387 - MTB_Mm LTR MaLR -8 399 1 3 1048 679 263 80 14 chr15 60700587 60700797 -42794177 + RMER15 LTR ERVL 352 575 0 3 1048 380 320 36 102 chr15 60701019 60701322 -42793652 + ORR1E LTR MaLR 75 357 -2 3 1048 230 296 101 40 chr15 60701348 60701496 -42793478 - RLTR13A LTR ERVK -350 505 349 3 1048 2426 73 9 0 chr15 60702049 60702365 -42792609 - ORR1A2 LTR MaLR -8 319 1 3 1048 249 219 13 27 chr15 60702682 60702703 -42792271 + (CCTG)n Simple_repeat Simple_repeat 3 23 0 3 1048 1251 72 0 0 chr15 60702703 60702870 -42792104 + (TTCCC)n Simple_repeat Simple_repeat 3 169 0 3 1048 930 186 0 0 chr15 60702870 60703121 -42791853 + CT-rich Low_complexity Low_complexity 1 251 0 3 1048 522 255 3 70 chr15 60703152 60703338 -42791636 - B1_Mur2 SINE Alu 0 150 5 3 1048 557 292 27 27 chr15 60703404 60703552 -42791422 - B3 SINE B2 -65 151 4 3 1048 581 304 44 60 chr15 60703767 60704118 -42790856 - L1MB2 LINE L1 -3 6168 5822 3 1048 492 301 98 37 chr15 60704368 60704696 -42790278 - L1MB2 LINE L1 -967 5173 4826 3 1048 349 179 0 23 chr15 60704696 60704782 -42790192 + GA-rich Low_complexity Low_complexity 3 86 0 3 1048 215 194 30 61 chr15 60704831 60704897 -42790077 + (TATG)n Simple_repeat Simple_repeat 4 67 0 3 1048 334 325 77 50 chr15 60704897 60705117 -42789857 - L1MB2 LINE L1 -1293 4850 4625 3 1048 284 48 0 23 chr15 60705161 60705204 -42789770 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1048 1379 250 38 9 chr15 60705576 60705891 -42789083 + Lx5 LINE L1 6706 7029 -21 3 1048 271 288 86 23 chr15 60705891 60706019 -42788955 - LTR48 LTR ERV1 -48 739 604 3 1048 301 303 61 49 chr15 60706195 60706358 -42788616 - LTR48 LTR ERV1 -523 264 100 3 1048 327 301 77 88 chr15 60706351 60706479 -42788495 + MER21B LTR ERV1 355 486 -377 3 1048 1168 270 39 121 chr15 60706479 60706892 -42788082 - MTE2b LTR MaLR 0 379 1 3 1048 327 301 77 88 chr15 60706892 60706945 -42788029 + MER21B LTR ERV1 487 534 -329 3 1048 22 0 0 0 chr15 60706945 60706967 -42788007 + AT_rich Low_complexity Low_complexity 1 22 0 3 1048 416 326 64 51 chr15 60708267 60708517 -42786457 - ORR1D2 LTR MaLR -11 359 99 3 1048 423 324 0 0 chr15 60708569 60708677 -42786297 - PB1D7 SINE Alu -10 110 3 3 1048 438 381 34 44 chr15 60708678 60708884 -42786090 - MER21B LTR ERV1 -559 304 101 3 1048 329 341 109 60 chr15 60709132 60709382 -42785592 + MER57E1 LTR ERV1 5 271 -101 3 1048 540 0 0 0 chr15 60709382 60709442 -42785532 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 1048 329 341 109 60 chr15 60709442 60709540 -42785434 + MER57E1 LTR ERV1 272 369 -3 3 1048 7828 70 3 1 chr15 60709992 60711143 -42783831 + L1_Mus2 LINE L1 5411 6564 -2 3 1048 1781 312 77 84 chr15 60711275 60711672 -42783302 - L1MC4a LINE L1 -10 7872 7530 3 1048 2815 142 147 16 chr15 60711672 60712188 -42782786 + RMER4B LTR ERVK 2 585 0 3 1048 1781 312 77 84 chr15 60712188 60713044 -42781930 - L1MC4a LINE L1 -353 7529 6642 3 1048 297 0 0 0 chr15 60713044 60713077 -42781897 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 1048 1781 312 77 84 chr15 60713077 60713799 -42781175 - L1MC4a LINE L1 -1241 6641 5910 3 1048 262 290 170 0 chr15 60713853 60713953 -42781021 + PB1D7 SINE Alu 4 120 0 3 1048 213 71 95 0 chr15 60713953 60713995 -42780979 + A-rich Low_complexity Low_complexity 4 49 0 3 1048 271 290 89 84 chr15 60714102 60714305 -42780669 - L1MC4a LINE L1 -2168 5714 5511 3 1048 1258 336 55 11 chr15 60714425 60714882 -42780092 + MTE-int LTR MaLR 854 1330 -250 3 1048 578 317 49 65 chr15 60715114 60715377 -42779597 - MER2 DNA MER2_type 0 345 87 3 1048 456 196 59 22 chr15 60715392 60715528 -42779446 + Lx9 LINE L1 7503 7643 -1 3 1048 239 29 57 0 chr15 60717593 60717628 -42777346 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 3 1048 200 336 107 16 chr15 60720125 60720246 -42774728 - L2b LINE L2 -2 3373 3242 3 1048 291 353 72 20 chr15 60720693 60720846 -42774128 - MIRb SINE MIR -48 220 60 3 1048 201 74 0 0 chr15 60721179 60721206 -42773768 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1048 739 214 17 44 chr15 60722083 60722264 -42772710 - L1MB8 LINE L1 0 6178 6003 3 1048 227 289 24 12 chr15 60722506 60722590 -42772384 + GA-rich Low_complexity Low_complexity 3 87 0 3 1048 246 105 0 0 chr15 60722596 60722634 -42772340 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1048 227 365 85 33 chr15 60723110 60723263 -42771711 - MLT1J LTR MaLR -332 180 20 3 1048 378 281 62 44 chr15 60723338 60723610 -42771364 - MamRep1161 DNA TcMar -669 288 12 3 1048 921 99 62 14 chr15 60724910 60725106 -42769868 - L1_Mus1 LINE L1 0 6567 6417 3 1048 861 10 0 0 chr15 60725106 60725204 -42769770 + (TG)n Simple_repeat Simple_repeat 2 99 0 3 1048 4046 266 3 19 chr15 60725596 60726602 -42768372 + Lx5 LINE L1 5999 6993 -65 3 1048 21 0 0 0 chr15 60726622 60726643 -42768331 + AT_rich Low_complexity Low_complexity 1 21 0 3 1048 2106 150 32 70 chr15 60728688 60729089 -42765885 + ORR1B1 LTR MaLR 1 386 -8 3 1048 25 0 0 0 chr15 60729675 60729700 -42765274 + AT_rich Low_complexity Low_complexity 1 25 0 3 1048 195 186 0 0 chr15 60730061 60730104 -42764870 + A-rich Low_complexity Low_complexity 1 43 0 3 1048 261 75 0 0 chr15 60730959 60730999 -42763975 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 3 1048 1203 82 0 7 chr15 60731009 60731157 -42763817 - B1_Mus2 SINE Alu 0 147 1 3 1048 22 35 0 0 chr15 60731447 60731476 -42763498 + AT_rich Low_complexity Low_complexity 1 29 0 3 1048 204 159 23 0 chr15 60732872 60732916 -42762058 + CT-rich Low_complexity Low_complexity 2 46 0 3 1048 307 167 0 0 chr15 60733034 60733082 -42761892 + polypyrimidine Low_complexity Low_complexity 3 50 0 3 1048 720 163 13 7 chr15 60733087 60733241 -42761733 + CT-rich Low_complexity Low_complexity 3 157 0 3 1048 387 0 0 0 chr15 60733272 60733315 -42761659 + (GA)n Simple_repeat Simple_repeat 1 43 0 3 1048 501 339 34 13 chr15 60733332 60733565 -42761409 - Lx8 LINE L1 -187 7286 7049 3 1048 503 325 88 53 chr15 60733874 60734215 -42760759 + ORR1E LTR MaLR 1 353 -6 3 1048 289 311 0 0 chr15 60734230 60734304 -42760670 + MER58B DNA MER1_type 237 310 -31 3 1048 1892 162 56 24 chr15 60735228 60735602 -42759372 - ORR1B1 LTR MaLR -8 386 1 3 1048 236 253 53 84 chr15 60737659 60737754 -42757220 + MER72B LTR ERV1 100 191 -577 3 1048 2008 51 4 0 chr15 60738237 60738473 -42756501 - L1_Mus1 LINE L1 -1 6566 6330 3 1048 254 309 37 9 chr15 60739059 60739167 -42755807 - Lx8 LINE L1 -383 7090 6980 3 1048 393 76 12 25 chr15 60739404 60739485 -42755489 + (CAAAA)n Simple_repeat Simple_repeat 1 80 0 3 1048 280 266 116 78 chr15 60739569 60739794 -42755180 - ORR1E LTR MaLR 0 379 124 3 1048 480 318 57 5 chr15 60740285 60740478 -42754496 - L1MD3 LINE L1 -197 7798 7596 3 1048 216 0 0 0 chr15 60740478 60740502 -42754472 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4 1048 27 0 0 0 chr15 60740993 60741020 -42753954 + AT_rich Low_complexity Low_complexity 1 27 0 4 1048 252 59 0 0 chr15 60742870 60742904 -42752070 + (T)n Simple_repeat Simple_repeat 1 34 0 4 1048 3594 33 5 0 chr15 60743894 60744288 -42750686 - MTA_Mm LTR MaLR 0 396 1 4 1048 431 18 18 0 chr15 60744302 60744358 -42750616 + (TTTG)n Simple_repeat Simple_repeat 4 60 0 4 1048 281 77 45 30 chr15 60746601 60746668 -42748306 + T-rich Low_complexity Low_complexity 5 72 0 4 1048 378 278 0 94 chr15 60746695 60746822 -42748152 + PB1D10 SINE Alu 3 117 0 4 1048 234 323 20 40 chr15 60748288 60748388 -42746586 + L2c LINE L2 3240 3337 -50 4 1048 199 262 16 47 chr15 60752421 60752485 -42742489 - L4 LINE RTE -882 1147 1086 4 1048 476 298 179 18 chr15 60754397 60754783 -42740191 - MLT1C LTR MaLR -19 448 1 4 1048 463 160 115 39 chr15 60755028 60755132 -42739842 + B1_Mur1 SINE Alu 31 142 -7 4 1048 576 23 114 11 chr15 60756185 60756273 -42738701 + L1_Mus1 LINE L1 6470 6566 -1 4 1048 263 324 0 0 chr15 60756994 60757068 -42737906 - ID4 SINE ID -8 75 2 4 1048 245 308 25 13 chr15 60757068 60757147 -42737827 - PB1D10 SINE Alu -37 80 1 4 1048 369 62 0 0 chr15 60757670 60757718 -42737256 + (TTAA)n Simple_repeat Simple_repeat 2 49 0 4 1048 21 0 0 0 chr15 60757719 60757740 -42737234 + AT_rich Low_complexity Low_complexity 1 21 0 4 1048 228 250 33 0 chr15 60758074 60758134 -42736840 - HAL1 LINE L1 -3 2504 2443 4 1048 242 353 103 0 chr15 60758943 60759059 -42735915 - B4 SINE B4 -15 277 150 4 1048 1750 149 81 22 chr15 60759042 60759365 -42735609 + RLTR9A2 LTR ERVK 42 383 0 4 1048 355 277 28 17 chr15 60759365 60759483 -42735491 - B4 SINE B4 -98 126 3 4 1048 285 286 21 21 chr15 60759609 60759702 -42735272 + MLT1A LTR MaLR 1 93 -281 4 1048 689 269 132 0 chr15 60760261 60760443 -42734531 - B3 SINE B2 -10 206 1 4 1048 283 292 154 22 chr15 60761628 60761810 -42733164 - HAL1 LINE L1 -2193 314 109 4 1048 221 174 22 0 chr15 60761830 60761876 -42733098 - B4 SINE B4 -245 47 1 4 1048 12643 214 66 52 chr15 60762214 60763520 -42731454 + L1_Mur3 LINE L1 665 1842 -4038 4 1048 9062 27 1 4 chr15 60763520 60764519 -42730455 + L1Md_F3 LINE L1 5587 6582 -2 4 1048 12643 185 60 70 chr15 60764519 60766037 -42728937 + L1_Mur3 LINE L1 1843 3368 -2512 4 1048 600 40 0 0 chr15 60766037 60766112 -42728862 + (CA)n Simple_repeat Simple_repeat 1 75 0 4 1048 12643 185 60 70 chr15 60766112 60766195 -42728779 + L1_Mur3 LINE L1 3369 3475 -2405 4 1048 270 56 0 0 chr15 60766195 60766231 -42728743 + (CAAAA)n Simple_repeat Simple_repeat 4 39 0 4 1048 12643 185 60 70 chr15 60766231 60767119 -42727855 + L1_Mur3 LINE L1 3476 4436 -1444 4 1048 318 24 0 0 chr15 60767137 60767179 -42727795 + L1Md_F2 LINE L1 6528 6569 -13 4 1048 186 71 0 0 chr15 60767271 60767299 -42727675 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1048 2025 171 32 3 chr15 60767301 60767646 -42727328 + ORR1B2 LTR MaLR 13 367 0 4 1048 2165 204 29 69 chr15 60767652 60768201 -42726773 + L1_Mur3 LINE L1 4443 4969 -911 4 1048 459 0 0 0 chr15 60768998 60769049 -42725925 + (TTTA)n Simple_repeat Simple_repeat 4 54 0 4 1048 4162 160 5 1 chr15 60769108 60769754 -42725220 - Lx5 LINE L1 -132 6918 6271 4 1048 294 216 0 38 chr15 60770978 60771150 -42723824 + CT-rich Low_complexity Low_complexity 1 165 0 4 1048 947 274 73 104 chr15 60771196 60771579 -42723395 - MTEb LTR MaLR -3 376 6 4 1048 1673 292 65 33 chr15 60771758 60772329 -42722645 - MTEb-int LTR MaLR -30 1550 962 4 1048 690 72 0 0 chr15 60772424 60772521 -42722453 + (TG)n Simple_repeat Simple_repeat 1 97 0 4 1048 39535 47 5 13 chr15 60773223 60779573 -42715401 - L1Md_T LINE L1 0 6582 281 4 1048 228 302 0 16 chr15 60779932 60779996 -42714978 - Cheshire DNA MER1_type -2 2418 2356 4 1048 273 86 0 0 chr15 60780865 60780900 -42714074 - U2 snRNA snRNA -153 35 1 4 1048 447 68 0 0 chr15 60781205 60781264 -42713710 + (CAATA)n Simple_repeat Simple_repeat 2 60 0 4 1048 486 263 116 58 chr15 60782121 60782311 -42712663 + MLT1H LTR MaLR 349 549 0 4 1048 608 256 37 12 chr15 60782673 60782835 -42712139 + MLT1E1 LTR MaLR 489 654 0 4 1048 210 340 259 0 chr15 60782920 60783117 -42711857 + MIR SINE MIR 8 255 -7 4 1048 1144 75 7 0 chr15 60783240 60783386 -42711588 - B1_Mus2 SINE Alu 0 147 1 4 1048 1431 232 11 7 chr15 60783998 60784276 -42710698 - MTC LTR MaLR 0 421 143 4 1048 186 396 56 9 chr15 60784328 60784435 -42710539 - MIRc SINE MIR -136 132 21 4 1048 954 121 81 0 chr15 60784623 60784772 -42710202 - MTC LTR MaLR -259 162 2 4 1048 2336 293 95 31 chr15 60785004 60786014 -42708960 + Lx8 LINE L1 6397 7471 -2 4 1048 185 394 57 9 chr15 60786447 60786552 -42708422 + MIRc SINE MIR 23 132 -136 4 1048 387 0 0 0 chr15 60786846 60786889 -42708085 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1048 857 10 0 10 chr15 60787807 60787910 -42707064 + (TTCTC)n Simple_repeat Simple_repeat 2 103 0 4 1048 192 200 0 0 chr15 60788254 60788309 -42706665 + CT-rich Low_complexity Low_complexity 2 56 0 4 1048 301 146 21 0 chr15 60788311 60788359 -42706615 - HAL1-3A_ME LINE L1 -824 2034 1986 4 1048 414 0 0 0 chr15 60788456 60788502 -42706472 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 1048 459 52 0 0 chr15 60788502 60788559 -42706415 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 1048 15280 11 0 0 chr15 60788774 60791277 -42703697 - L1Md_A LINE L1 0 6582 4080 4 1048 261 304 0 0 chr15 60791631 60791687 -42703287 - tRNA-Ala-GCY_ tRNA tRNA -7 68 13 4 1048 36106 17 0 7 chr15 60791687 60796700 -42698274 + L1Md_A LINE L1 619 5586 -297 4 1048 8798 16 0 0 chr15 60796700 60797696 -42697278 + L1Md_A LINE L1 5587 6582 0 4 1048 391 253 55 0 chr15 60797750 60797841 -42697133 - B1F SINE Alu -11 138 43 4 1048 24 32 0 0 chr15 60798025 60798056 -42696918 + AT_rich Low_complexity Low_complexity 1 31 0 4 1048 1031 267 93 57 chr15 60798557 60798942 -42696032 + MTD LTR MaLR 21 419 0 4 1048 27 62 0 0 chr15 60799196 60799244 -42695730 + AT_rich Low_complexity Low_complexity 1 48 0 4 1048 219 167 30 15 chr15 60800509 60800576 -42694398 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 4 1048 234 0 0 0 chr15 60801580 60801606 -42693368 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1048 940 300 63 28 chr15 60801884 60802634 -42692340 + L1MB3 LINE L1 5080 5853 -330 4 1048 237 355 75 26 chr15 60802640 60802841 -42692133 + MLT1H LTR MaLR 154 364 -215 4 1048 1189 235 53 40 chr15 60803746 60804141 -42690833 - Lx7 LINE L1 -203 7493 7094 4 1048 186 246 95 32 chr15 60804211 60804274 -42690700 + L3 LINE CR1 4100 4166 -323 4 1048 324 188 0 0 chr15 60804625 60804694 -42690280 + (CA)n Simple_repeat Simple_repeat 1 69 0 4 1048 248 80 77 33 chr15 60804743 60804834 -42690140 + T-rich Low_complexity Low_complexity 2 96 0 4 1048 33550 53 0 3 chr15 60804941 60810618 -42684356 + L1Md_T LINE L1 1 5588 -298 4 1048 8555 29 0 0 chr15 60810619 60811615 -42683359 + L1Md_T LINE L1 5590 6585 0 4 1048 722 249 66 42 chr15 60812240 60812572 -42682402 - RMER6A LTR ERVK -8 748 410 4 1048 1063 81 23 6 chr15 60812572 60812746 -42682228 + (TTCTC)n Simple_repeat Simple_repeat 3 179 0 4 1048 722 249 66 42 chr15 60812746 60812869 -42682105 - RMER6A LTR ERVK -347 409 282 4 1048 599 40 81 0 chr15 60812869 60812993 -42681981 + (TC)n Simple_repeat Simple_repeat 2 135 0 4 1048 1434 196 42 16 chr15 60812993 60813333 -42681641 - RMER6A LTR ERVK -187 533 157 4 1048 426 287 21 29 chr15 60813786 60813926 -42681048 - B1F SINE Alu -8 141 3 4 1048 213 369 117 0 chr15 60814041 60814152 -42680822 - MIRb SINE MIR -124 144 21 4 1048 203 125 25 0 chr15 60814699 60814739 -42680235 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 4 1048 251 333 8 0 chr15 60814741 60814867 -42680107 + CT-rich Low_complexity Low_complexity 2 128 0 4 1048 339 78 0 0 chr15 60814872 60814923 -42680051 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1048 199 98 39 19 chr15 60815313 60815365 -42679609 + A-rich Low_complexity Low_complexity 2 54 0 4 1048 285 51 0 0 chr15 60815438 60815477 -42679497 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1048 1009 92 28 7 chr15 60815477 60815619 -42679355 - B1_Mus2 SINE Alu -2 145 1 4 1048 217 347 21 0 chr15 60815650 60815745 -42679229 - MIR3 SINE MIR -13 195 99 4 1048 183 129 0 0 chr15 60815807 60815838 -42679136 + (TTA)n Simple_repeat Simple_repeat 2 32 0 4 16 9560 24 0 0 chr15 60816407 60818254 -42676720 - L1Md_T LINE L1 -1 6581 4734 4 1049 231 114 0 0 chr15 60818508 60818543 -42676431 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1049 267 312 123 12 chr15 60818588 60818750 -42676224 - MIR3 SINE MIR -13 195 16 4 1049 193 234 138 38 chr15 60818889 60818969 -42676005 + MIR SINE MIR 85 172 -90 4 1049 364 220 8 8 chr15 60819646 60819765 -42675209 + GA-rich Low_complexity Low_complexity 3 121 0 4 1049 840 128 0 0 chr15 60819770 60819903 -42675071 + (GAA)n Simple_repeat Simple_repeat 3 135 0 4 1049 798 237 34 204 chr15 60820397 60820843 -42674131 - ORR1D1 LTR MaLR 0 374 5 4 1049 675 91 57 8 chr15 60821033 60821155 -42673819 + Lx LINE L1 6527 6654 0 4 1049 417 39 0 0 chr15 60822143 60822194 -42672780 + (T)n Simple_repeat Simple_repeat 1 51 0 4 1049 2055 148 114 8 chr15 60824206 60824582 -42670392 + MTC LTR MaLR 6 421 0 4 1049 4537 173 117 11 chr15 60824581 60825535 -42669439 + MTC-int LTR MaLR 3 1057 -201 4 1049 431 157 0 0 chr15 60825541 60825611 -42669363 + MTC LTR MaLR 352 421 0 4 1049 781 291 30 91 chr15 60826881 60827234 -42667740 - MLT2D LTR ERVL -1 396 68 4 1049 380 104 15 0 chr15 60827319 60827386 -42667588 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 4 1049 261 0 0 0 chr15 60828159 60828188 -42666786 + (A)n Simple_repeat Simple_repeat 1 29 0 4 1049 308 364 40 0 chr15 60828364 60828463 -42666511 + RSINE1 SINE B4 55 157 -8 4 1049 213 158 26 0 chr15 60828578 60828616 -42666358 + CT-rich Low_complexity Low_complexity 1 39 0 4 1049 963 150 0 0 chr15 60828616 60828765 -42666209 + (TC)n Simple_repeat Simple_repeat 2 150 0 4 1049 261 0 0 0 chr15 60828765 60828794 -42666180 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1049 963 150 0 0 chr15 60828794 60828936 -42666038 + (TC)n Simple_repeat Simple_repeat 1 142 0 5 1049 413 333 109 40 chr15 60829020 60829267 -42665707 + Arthur1B DNA Tip100 1 264 -961 5 1049 250 297 125 0 chr15 60830001 60830065 -42664909 + MER99 DNA hAT? 1 72 -759 5 1049 362 355 17 11 chr15 60830163 60830337 -42664637 - MER99 DNA hAT? -384 447 273 5 1049 714 226 7 0 chr15 60830436 60830582 -42664392 + B1_Mur2 SINE Alu 1 147 -2 5 1049 729 321 110 7 chr15 60830870 60831162 -42663812 + LTR78 LTR ERV1 262 583 -721 5 1049 198 71 0 0 chr15 60831179 60831207 -42663767 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1049 494 358 91 31 chr15 60831561 60831815 -42663159 + MER68 LTR ERVL 62 330 -233 5 1049 189 0 0 0 chr15 60833060 60833081 -42661893 + (TG)n Simple_repeat Simple_repeat 1 21 0 5 1049 647 142 7 0 chr15 60833081 60833229 -42661745 + (GA)n Simple_repeat Simple_repeat 2 150 0 5 1049 432 354 123 19 chr15 60833424 60833741 -42661233 + LTR82B Low_complexity ERVL 229 578 -252 5 1049 647 265 0 7 chr15 60833774 60833922 -42661052 - ID_B1 SINE B4 0 224 78 5 1049 23 33 0 0 chr15 60834513 60834543 -42660431 + AT_rich Low_complexity Low_complexity 1 30 0 5 1049 292 302 17 78 chr15 60834671 60834786 -42660188 - MER2 DNA MER2_type -28 317 210 5 1049 676 264 74 5 chr15 60834972 60835174 -42659800 - MER2 DNA MER2_type -122 223 8 5 1049 384 119 0 0 chr15 60837185 60837244 -42657730 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 5 1049 208 341 63 58 chr15 60837332 60837506 -42657468 - L2c LINE L2 -2 3385 3211 5 1049 259 335 120 26 chr15 60837773 60838006 -42656968 + Lx8 LINE L1 7179 7433 -40 5 1049 372 322 93 29 chr15 60838070 60838319 -42656655 + MER58B DNA MER1_type 71 333 -8 5 1049 22 56 0 0 chr15 60838546 60838582 -42656392 + AT_rich Low_complexity Low_complexity 1 36 0 5 1049 280 333 0 100 chr15 60838609 60838729 -42656245 - PB1D10 SINE Alu -5 112 5 5 1049 590 329 19 6 chr15 60838649 60838811 -42656163 - ID_B1 SINE B4 -60 164 1 5 1049 23 0 0 0 chr15 60838911 60838934 -42656040 + AT_rich Low_complexity Low_complexity 1 23 0 5 1049 180 194 0 0 chr15 60838937 60838973 -42656001 - L2b LINE L2 -2 3373 3338 5 1049 234 0 0 0 chr15 60839755 60839781 -42655193 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 5 1049 1169 195 9 4 chr15 60841617 60841849 -42653125 + Lx4B LINE L1 6372 6604 -454 5 1049 728 264 132 15 chr15 60842254 60842588 -42652386 + Lx2 LINE L1 6609 6981 -16 5 1049 393 39 0 0 chr15 60843500 60843551 -42651423 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1049 5358 39 19 0 chr15 60843551 60844201 -42650773 - L1Md_F2 LINE L1 -18 6564 5903 5 1049 349 240 61 20 chr15 60844423 60844521 -42650453 - ORR1E LTR MaLR -2 357 256 5 1049 188 176 0 0 chr15 60844621 60844655 -42650319 - MIR SINE MIR -10 252 219 5 1049 228 35 0 0 chr15 60844775 60844804 -42650170 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1049 473 347 59 29 chr15 60845423 60845901 -42649073 - L1MC4 LINE L1 -229 7813 7322 5 1049 387 0 0 0 chr15 60846223 60846266 -42648708 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1049 1142 76 0 0 chr15 60846621 60846766 -42648208 - B1_Mus1 SINE Alu -2 146 2 5 1049 22 35 0 0 chr15 60847173 60847202 -42647772 + AT_rich Low_complexity Low_complexity 1 29 0 5 1049 337 324 124 0 chr15 60848128 60848233 -42646741 - MER58A DNA MER1_type -106 118 1 5 1049 1016 121 0 0 chr15 60849609 60849750 -42645224 + B2_Mm2 SINE B2 27 167 -28 5 1049 279 362 50 21 chr15 60850057 60850198 -42644776 + MIRb SINE MIR 20 164 -104 5 1049 1708 287 25 7 chr15 60850552 60851159 -42643815 - Lx6 LINE L1 -26 7434 6457 5 1049 1421 264 70 20 chr15 60851161 60851830 -42643144 + Lx6 LINE L1 5817 6752 -708 5 1049 253 190 51 0 chr15 60852388 60852467 -42642507 + Lx9 LINE L1 7562 7644 0 5 1049 559 307 21 0 chr15 60852724 60852864 -42642110 + RSINE1 SINE B4 3 145 -20 5 1049 402 85 0 0 chr15 60852865 60852924 -42642050 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1049 210 37 0 0 chr15 60852935 60852962 -42642012 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 5 1049 224 136 0 33 chr15 60852981 60853042 -42641932 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 5 1049 983 280 66 30 chr15 60853709 60854242 -42640732 - L1MA9 LINE L1 -1 6311 5760 5 1049 234 267 12 0 chr15 60854314 60854400 -42640574 - L1MA9 LINE L1 -703 5597 5511 5 1049 323 270 9 9 chr15 60854884 60854996 -42639978 + L1MA7 LINE L1 5842 5953 -359 5 1049 230 296 75 85 chr15 60855038 60855226 -42639748 - RMER20B LTR ERVK 0 516 331 5 1049 347 252 48 40 chr15 60855380 60855504 -42639470 - RMER20B LTR ERVK -502 125 1 5 1049 340 217 110 12 chr15 60855607 60855770 -42639204 + L1MA7 LINE L1 6113 6291 0 5 1049 729 193 47 0 chr15 60856868 60857018 -42637956 + URR1B DNA MER1_type 68 224 -1 5 1049 247 354 45 82 chr15 60857071 60857314 -42637660 - Charlie23a DNA MER1_type -105 234 1 5 1049 425 285 25 167 chr15 60857337 60857535 -42637439 + MTE2a LTR MaLR 1 170 -209 5 1049 36899 6 0 1 chr15 60857930 60863700 -42631274 + L1Md_A LINE L1 1 5586 -297 5 1049 9080 2 0 0 chr15 60863700 60864696 -42630278 + L1Md_A LINE L1 5587 6582 0 5 1049 244 240 105 48 chr15 60865413 60865518 -42629456 + L1MC3 LINE L1 6028 6138 -1647 5 1049 522 0 0 0 chr15 60865580 60865638 -42629336 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 1049 396 0 0 0 chr15 60865638 60865681 -42629293 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 1049 203 323 164 31 chr15 60865791 60865986 -42628988 + L2 LINE L2 2807 3027 -392 5 1049 866 116 0 7 chr15 60866422 60866561 -42628413 + (TTTC)n Simple_repeat Simple_repeat 4 141 0 5 1049 5589 163 43 3 chr15 60866563 60867800 -42627174 - Lx LINE L1 -13 6641 5366 5 1049 1262 122 5 5 chr15 60867798 60868004 -42626970 - Lx LINE L1 -921 4962 4757 5 1049 13759 81 7 4 chr15 60868009 60868858 -42626116 - L1VL4 LINE L1 -625 2934 2081 5 1049 4775 116 65 71 chr15 60868858 60869768 -42625206 + RMER17A2 LTR ERVK 1 904 -2 5 1049 13759 94 16 5 chr15 60869768 60871823 -42623151 - L1VL4 LINE L1 -1479 2080 2 5 1049 477 0 0 0 chr15 60872153 60872206 -42622768 + (TTC)n Simple_repeat Simple_repeat 3 55 0 5 1049 597 28 0 0 chr15 60872206 60872277 -42622697 + (TC)n Simple_repeat Simple_repeat 2 72 0 5 1049 1230 234 100 57 chr15 60873723 60874072 -42620902 + ORR1D2 LTR MaLR 1 364 -6 5 1049 277 317 88 122 chr15 60874648 60874910 -42620064 - RMER13A LTR ERVK -63 797 545 5 1049 755 240 89 95 chr15 60874958 60875285 -42619689 - RMER13A LTR ERVK -535 325 1 5 1049 311 325 28 7 chr15 60875306 60875520 -42619454 - L1ME3B LINE L1 -195 5969 5751 5 1049 219 88 0 0 chr15 60875873 60875907 -42619067 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1049 566 221 39 39 chr15 60877067 60877080 -42617894 - B1_Mur4 SINE Alu -2 148 138 5 1049 198 71 0 0 chr15 60877080 60877108 -42617866 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 5 1049 566 221 39 39 chr15 60877108 60877221 -42617753 - B1_Mur4 SINE Alu -13 137 22 5 1049 1911 241 58 49 chr15 60877221 60877789 -42617185 - RMER19C LTR ERVK 0 611 39 5 1049 732 192 20 7 chr15 60877808 60877955 -42617019 - B1_Mur3 SINE Alu 0 149 1 5 1049 2478 249 23 37 chr15 60878253 60878895 -42616079 - RMER13B LTR ERVK -4 904 272 5 1049 1459 211 91 31 chr15 60878901 60879008 -42615966 - RMER17B LTR ERVK -517 441 307 5 1049 611 60 0 12 chr15 60879008 60879093 -42615881 + (GA)n Simple_repeat Simple_repeat 2 85 0 5 1049 1459 211 91 31 chr15 60879093 60879401 -42615573 - RMER17B LTR ERVK -652 306 2 5 1049 453 36 0 0 chr15 60879570 60879625 -42615349 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1049 573 306 45 54 chr15 60879938 60880180 -42614794 - MTC LTR MaLR -181 240 1 5 1049 202 187 54 11 chr15 60880320 60880412 -42614562 + (TTATA)n Simple_repeat Simple_repeat 2 97 0 5 1049 250 349 0 15 chr15 60881515 60881646 -42613328 + (CA)n Simple_repeat Simple_repeat 2 130 0 5 1049 519 320 0 0 chr15 60884267 60884423 -42610551 + Lx8 LINE L1 6961 7116 -357 5 1049 184 122 0 58 chr15 60884576 60884628 -42610346 + A-rich Low_complexity Low_complexity 5 53 0 5 1049 658 352 43 3 chr15 60884733 60885032 -42609942 + RMER5 LTR ERV1 212 522 -12 5 1049 1028 237 17 0 chr15 60885373 60885605 -42609369 - Lx6 LINE L1 -16 7444 7209 5 1049 432 0 0 0 chr15 60885696 60885744 -42609230 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1049 264 275 41 18 chr15 60885778 60885965 -42609009 + L1MA5 LINE L1 6103 6296 -4 5 1049 288 0 0 0 chr15 60886021 60886053 -42608921 + (TA)n Simple_repeat Simple_repeat 1 32 0 5 1049 35 0 0 0 chr15 60886085 60886120 -42608854 + AT_rich Low_complexity Low_complexity 1 35 0 5 1049 690 47 0 0 chr15 60887487 60887573 -42607401 + (TA)n Simple_repeat Simple_repeat 2 87 0 5 1049 201 357 98 23 chr15 60888075 60888207 -42606767 + MIRc SINE MIR 14 155 -113 5 1049 423 334 111 45 chr15 60888229 60888693 -42606281 + MT2A LTR ERVL 21 553 -3 5 1049 533 297 68 41 chr15 60888864 60889085 -42605889 + MTEb LTR MaLR 7 233 -146 5 1049 5188 234 29 7 chr15 60889118 60889201 -42605773 + Lx7 LINE L1 6096 6181 -1515 5 1049 261 0 0 0 chr15 60889201 60889230 -42605744 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1049 5188 234 29 7 chr15 60889230 60890380 -42604594 + Lx7 LINE L1 6182 7355 -341 5 1049 655 71 10 10 chr15 60890380 60890479 -42604495 + (TCTA)n Simple_repeat Simple_repeat 4 102 0 5 1049 1772 186 62 27 chr15 60890660 60891031 -42603943 + ORR1C2 LTR MaLR 1 384 0 5 1049 236 273 115 48 chr15 60891057 60891161 -42603813 - L2a LINE L2 -5 3421 3311 5 1049 28407 111 11 15 chr15 60892461 60895947 -42599027 - L1_Mus3 LINE L1 -5 6633 3171 5 1049 240 59 0 0 chr15 60895947 60895981 -42598993 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 5 1049 28407 121 10 21 chr15 60895981 60898760 -42596214 - L1_Mus3 LINE L1 -2713 3170 416 5 1049 312 327 44 91 chr15 60899753 60900093 -42594881 - L1MC4 LINE L1 -1036 7006 6683 5 1049 189 0 0 0 chr15 60900184 60900205 -42594769 + (CAGAGA)n Simple_repeat Simple_repeat 2 22 0 5 1049 581 199 108 49 chr15 60900342 60900527 -42594447 - Lx2B LINE L1 0 7000 6805 5 1049 562 335 0 32 chr15 60900831 60901019 -42593955 - MTEb LTR MaLR 0 379 198 6 1049 363 323 10 0 chr15 60901010 60901109 -42593865 - MTEa LTR MaLR -112 267 168 6 1049 377 320 12 37 chr15 60901133 60901295 -42593679 - RSINE1 SINE B4 -6 159 2 6 1049 510 329 13 6 chr15 60901296 60901455 -42593519 - MTEa LTR MaLR -200 179 20 6 1049 23 0 0 0 chr15 60902207 60902230 -42592744 + AT_rich Low_complexity Low_complexity 1 23 0 6 1049 339 96 0 0 chr15 60902681 60902733 -42592241 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 1049 4629 60 8 26 chr15 60904493 60905112 -42589862 + L1Md_F2 LINE L1 5960 6567 -15 6 1049 815 195 7 7 chr15 60905118 60905268 -42589706 + B1_Mur4 SINE Alu 1 150 0 6 1049 186 43 0 0 chr15 60905277 60905300 -42589674 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 1049 459 0 0 0 chr15 60905341 60905392 -42589582 + (GTTTG)n Simple_repeat Simple_repeat 4 54 0 6 1049 767 280 49 83 chr15 60905401 60905948 -42589026 - L1MC1 LINE L1 -26 6318 5775 6 1049 1873 196 144 75 chr15 60906065 60906805 -42588169 + RMER6C LTR ERVK 1 720 0 6 1049 266 284 45 11 chr15 60907364 60907453 -42587521 - MER20 DNA MER1_type -3 216 125 6 1049 493 342 32 64 chr15 60907616 60907866 -42587108 + RLTR26 LTR ERVK 176 417 -225 6 1049 250 314 9 64 chr15 60908211 60908320 -42586654 - MER20 DNA MER1_type -111 108 6 6 1049 291 176 26 26 chr15 60909506 60909582 -42585392 - L1MB8 LINE L1 -2 6176 6101 6 1049 36200 30 0 0 chr15 60909576 60915726 -42579248 - L1Md_T LINE L1 0 6585 338 6 1049 420 283 33 0 chr15 60915877 60916057 -42578917 - L1MB8 LINE L1 -211 5967 5782 6 1049 539 313 0 7 chr15 60916069 60916204 -42578770 + B1_Mur2 SINE Alu 15 148 -1 6 1049 183 100 0 0 chr15 60916217 60916247 -42578727 + (GA)n Simple_repeat Simple_repeat 1 30 0 6 1049 1265 280 81 20 chr15 60916256 60917199 -42577775 - L1MB8 LINE L1 -400 5774 4777 6 1049 523 359 6 0 chr15 60917350 60917506 -42577468 - RSINE1 SINE B4 -6 159 3 6 1049 23 0 0 0 chr15 60917744 60917767 -42577207 + AT_rich Low_complexity Low_complexity 1 23 0 6 1049 1279 133 0 5 chr15 60917885 60918089 -42576885 - L1_Mus1 LINE L1 0 6567 6365 6 1049 4334 66 1 1 chr15 60918091 60918897 -42576077 - L1Md_F2 LINE L1 -492 6090 5286 6 1049 27515 92 61 10 chr15 60918897 60924740 -42570234 - L1Md_F2 LINE L1 -19 6563 404 6 1049 710 313 104 58 chr15 60924742 60925617 -42569357 - L1MB8 LINE L1 -1816 4330 3416 6 1049 1289 68 1 0 chr15 60925603 60925783 -42569191 + L1Md_F2 LINE L1 5401 5586 -297 6 1049 8206 43 2 0 chr15 60925784 60926763 -42568211 + L1Md_F2 LINE L1 5588 6568 -14 6 1049 213 254 95 0 chr15 60926898 60926961 -42568013 - B1_Mus1 SINE Alu -77 71 3 6 1049 279 194 64 11 chr15 60926972 60927066 -42567908 + MER112 DNA MER1_type 156 254 -7 6 1049 200 118 29 0 chr15 60927204 60927238 -42567736 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 6 1049 1423 226 64 30 chr15 60927248 60927641 -42567333 - Lx4B LINE L1 -4 7054 6649 6 1049 562 220 70 77 chr15 60927635 60927882 -42567092 + Lx4B LINE L1 6798 7047 -3 6 1049 261 209 32 65 chr15 60928556 60928679 -42566295 - L1MEc LINE L1 -5490 910 792 6 1049 281 329 176 40 chr15 60928737 60928780 -42566194 + MLT1A0 LTR MaLR 112 164 -201 6 1049 297 0 0 0 chr15 60928780 60928813 -42566161 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1049 281 329 176 40 chr15 60928813 60928991 -42565983 + MLT1A0 LTR MaLR 165 362 -3 6 1049 310 254 99 56 chr15 60929515 60929657 -42565317 + HAL1-3A_ME LINE L1 2292 2439 -419 6 1049 897 116 18 24 chr15 60929662 60929830 -42565144 + GA-rich Low_complexity Low_complexity 3 169 0 6 1049 656 245 216 117 chr15 60929832 60930174 -42564800 + MTE2a LTR MaLR 4 379 0 6 1049 28 29 0 0 chr15 60930424 60930459 -42564515 + AT_rich Low_complexity Low_complexity 1 35 0 6 1049 1303 79 17 0 chr15 60931322 60931499 -42563475 - B2_Mm2 SINE B2 -15 180 1 6 1049 788 185 0 0 chr15 60931979 60932109 -42562865 - B1_Mur4 SINE Alu -6 144 15 6 1049 1021 295 52 58 chr15 60932234 60932756 -42562218 - Lx8 LINE L1 -5 7468 6950 6 1049 1158 82 0 0 chr15 60932771 60932918 -42562056 + B1_Mus1 SINE Alu 2 148 0 6 1049 207 0 0 0 chr15 60932929 60932952 -42562022 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 1049 480 110 0 12 chr15 60933012 60933101 -42561873 - B2_Mm2 SINE B2 -126 90 6 6 1049 1610 180 45 84 chr15 60934931 60935289 -42559685 + ORR1B1 LTR MaLR 43 386 -8 6 1049 546 358 21 66 chr15 60938259 60938546 -42556428 - B4 SINE B4 -10 282 9 6 1049 753 182 36 5 chr15 60938642 60938835 -42556139 + Lx9 LINE L1 7438 7636 -8 6 1049 379 285 7 7 chr15 60938856 60939008 -42555966 + L1MD LINE L1 2463 2614 -3532 6 1049 971 266 24 14 chr15 60939078 60939368 -42555606 - Lx9 LINE L1 -392 7252 6960 6 1049 427 244 11 11 chr15 60939378 60939465 -42555509 + URR1B DNA MER1_type 1 87 -138 6 1049 501 71 0 0 chr15 60939974 60940044 -42554930 + (TG)n Simple_repeat Simple_repeat 2 71 0 6 1049 283 257 0 103 chr15 60940049 60940127 -42554847 - B4 SINE B4 -5 287 218 6 1049 198 200 0 0 chr15 60940157 60940187 -42554787 + (TA)n Simple_repeat Simple_repeat 2 31 0 6 1049 297 0 0 0 chr15 60940187 60940220 -42554754 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1049 198 200 0 0 chr15 60940220 60940239 -42554735 + (TA)n Simple_repeat Simple_repeat 1 19 0 6 1049 344 304 26 9 chr15 60940240 60940356 -42554618 - RSINE1 SINE B4 -45 120 3 6 1049 183 376 80 35 chr15 60941565 60941678 -42553296 - L2b LINE L2 -97 3278 3161 6 1049 531 0 0 0 chr15 60942259 60942318 -42552656 + (GGAA)n Simple_repeat Simple_repeat 3 61 0 6 1049 213 281 202 0 chr15 60942658 60942747 -42552227 + L2b LINE L2 3317 3423 -3 6 1049 5255 89 9 24 chr15 60943461 60944220 -42550754 - Lx3_Mus LINE L1 -459 6550 5803 6 1049 3641 66 19 13 chr15 60944220 60944693 -42550281 + Lx3_Mus LINE L1 6533 7008 -1 6 1049 347 211 11 0 chr15 60945287 60945377 -42549597 + (TATG)n Simple_repeat Simple_repeat 4 94 0 6 1049 292 319 56 36 chr15 60945401 60945581 -42549393 + ORR1E LTR MaLR 195 377 -2 6 1049 246 310 9 18 chr15 60945869 60945959 -42549015 - MIR SINE MIR -120 148 58 6 1049 487 338 113 45 chr15 60946997 60947288 -42547686 + MLT1A0 LTR MaLR 1 311 -54 6 1049 474 18 0 0 chr15 60947809 60947864 -42547110 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 6 1049 183 42 0 0 chr15 60947864 60947887 -42547087 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 1050 305 319 57 57 chr15 60948943 60949136 -42545838 - MARNA DNA Mariner -79 507 315 6 1050 357 43 0 0 chr15 60949284 60949331 -42545643 + (TCTG)n Simple_repeat Simple_repeat 4 50 0 6 1050 210 71 0 0 chr15 60949333 60949361 -42545613 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1050 236 351 0 13 chr15 60949773 60949851 -42545123 - MLT1I LTR MaLR -272 139 63 6 1050 1645 305 40 38 chr15 60950054 60950773 -42544201 - Lx8 LINE L1 -30 7443 6723 6 1050 8712 165 9 4 chr15 60950797 60952730 -42542244 - Lx2A1 LINE L1 -2 7006 5060 6 1050 1699 216 77 3 chr15 60953470 60953846 -42541128 + MTD LTR MaLR 3 406 -13 6 1050 211 372 49 8 chr15 60953935 60954057 -42540917 - MIRb SINE MIR -94 174 48 6 1050 238 294 95 80 chr15 60954702 60954839 -42540135 - MLT1I-int LTR MaLR -288 1099 961 6 1050 393 328 208 16 chr15 60955335 60955580 -42539394 + B4A SINE B4 1 292 0 6 1050 243 88 0 0 chr15 60956232 60956266 -42538708 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 6 1050 180 288 24 59 chr15 60956757 60956842 -42538132 + L3 LINE CR1 4116 4197 -292 6 1050 216 268 49 14 chr15 60958510 60958654 -42536320 + (CATA)n Simple_repeat Simple_repeat 4 152 0 6 1050 213 39 0 0 chr15 60958707 60958733 -42536241 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 1050 423 0 0 0 chr15 60958733 60958779 -42536195 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1050 468 330 53 16 chr15 60959879 60960067 -42534907 + MER58A DNA MER1_type 24 218 -6 6 1050 3228 250 22 11 chr15 60961662 60962418 -42532556 + Lx9 LINE L1 6374 7138 -506 6 1050 2048 92 22 7 chr15 60963242 60963574 -42531400 - ORR1A2 LTR MaLR -3 391 33 6 1050 531 265 72 60 chr15 60963663 60963785 -42531189 + RLTR15 LTR ERVK 1 121 -238 6 1050 261 0 0 0 chr15 60963785 60963814 -42531160 + (GA)n Simple_repeat Simple_repeat 1 29 0 6 1050 531 265 72 60 chr15 60963814 60963956 -42531018 + RLTR15 LTR ERVK 122 268 -91 6 1050 3233 263 88 11 chr15 60964306 60965649 -42529325 + RMER1B Other Other 65 1064 -2 6 1050 375 23 0 0 chr15 60965837 60965881 -42529093 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1050 459 0 0 0 chr15 60965881 60965931 -42529043 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 1050 4022 57 2 0 chr15 60967065 60967574 -42527400 - L1_Mm LINE L1 -1210 4673 4164 6 1050 503 290 92 0 chr15 60969276 60969407 -42525567 + B1F SINE Alu 1 143 -6 6 1050 675 136 15 15 chr15 60969407 60969541 -42525433 + GA-rich Low_complexity Low_complexity 4 137 0 6 1050 1065 108 11 6 chr15 60969541 60969718 -42525256 + (GGA)n Simple_repeat Simple_repeat 3 180 0 6 1050 721 132 0 23 chr15 60971519 60971651 -42523323 - Lx3_Mus LINE L1 0 7009 6881 6 1050 2718 75 121 40 chr15 60971651 60971877 -42523097 + Lx3_Mus LINE L1 5695 5924 -1085 6 1050 207 0 0 0 chr15 60971877 60971900 -42523074 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1050 2718 75 121 40 chr15 60971900 60972120 -42522854 + Lx3_Mus LINE L1 5925 6177 -832 6 1050 3661 76 32 2 chr15 60972771 60972946 -42522028 - MT2C_Mm LTR ERVL 0 475 300 6 1050 450 0 0 0 chr15 60972946 60972996 -42521978 + (GA)n Simple_repeat Simple_repeat 1 50 0 6 1050 3661 76 32 2 chr15 60972996 60973281 -42521693 - MT2C_Mm LTR ERVL -176 299 2 6 1050 423 125 0 0 chr15 60973311 60973383 -42521591 + (CA)n Simple_repeat Simple_repeat 2 73 0 6 1050 312 259 12 12 chr15 60973527 60973613 -42521361 - Lx8 LINE L1 -202 7271 7186 6 1050 254 228 0 17 chr15 60973679 60973737 -42521237 - B1F SINE Alu 0 149 93 6 1050 181 0 0 65 chr15 60973754 60973785 -42521189 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 6 1050 411 194 53 88 chr15 60973785 60973898 -42521076 - B1F1 SINE Alu -9 140 32 6 1050 252 0 0 0 chr15 60976027 60976055 -42518919 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 1050 354 45 0 0 chr15 60976055 60976098 -42518876 + (GA)n Simple_repeat Simple_repeat 1 44 0 7 1050 1031 147 100 15 chr15 60976276 60976383 -42518591 - Lx2 LINE L1 -6 6991 6866 7 1050 180 0 0 0 chr15 60976383 60976403 -42518571 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 7 1050 1031 147 100 15 chr15 60976403 60976495 -42518479 - Lx2 LINE L1 -132 6865 6775 7 1050 8021 96 24 9 chr15 60976494 60978610 -42516364 - Lx2 LINE L1 -1537 2377 948 7 1050 657 335 83 14 chr15 60978924 60979272 -42515702 - MLT1D LTR MaLR -11 494 123 7 1050 195 338 153 19 chr15 60979727 60979884 -42515090 - MIRc SINE MIR -51 217 40 7 1050 9386 11 0 1 chr15 60980150 60981193 -42513781 + L1Md_A LINE L1 4545 5586 -297 7 1050 9361 16 0 0 chr15 60981193 60982189 -42512785 + L1Md_A LINE L1 5587 6582 0 7 1050 246 337 71 12 chr15 60982941 60983025 -42511949 - MER58B DNA MER1_type -248 93 5 7 1050 543 43 0 0 chr15 60983111 60983181 -42511793 + (CA)n Simple_repeat Simple_repeat 1 70 0 7 1050 334 355 24 0 chr15 60983744 60983868 -42511106 - MIR SINE MIR -110 152 26 7 1050 830 294 16 46 chr15 60984482 60984785 -42510189 + MER46C DNA MER2_type 44 337 -1 7 1050 228 347 0 0 chr15 60984789 60984887 -42510087 + MIR SINE MIR 156 253 -9 7 1050 247 365 88 36 chr15 60984942 60985192 -42509782 - Kanga1 DNA Tc2 -336 1409 1147 7 1050 219 96 58 0 chr15 60985363 60985415 -42509559 + (CAA)n Simple_repeat Simple_repeat 2 56 0 7 1050 1206 186 109 11 chr15 60988093 60988360 -42506614 - Lx9 LINE L1 -188 7456 7164 7 1050 515 281 14 29 chr15 60988378 60988517 -42506457 - B3 SINE B2 -79 137 1 7 1050 306 164 0 0 chr15 60989482 60989537 -42505437 + A-rich Low_complexity Low_complexity 1 55 0 7 1050 450 36 0 0 chr15 60990933 60990989 -42503985 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 1050 465 66 0 0 chr15 60992631 60992692 -42502282 + (CA)n Simple_repeat Simple_repeat 1 61 0 7 1050 260 262 49 12 chr15 60993106 60993187 -42501787 + HUERS-P3b-int LTR ERV1 1739 1822 -5596 7 1050 378 305 124 43 chr15 60994602 60994787 -42500187 + MER105 DNA DNA 2 201 -3 7 1050 200 200 0 0 chr15 60995953 60995998 -42498976 + GA-rich Low_complexity Low_complexity 2 46 0 7 1050 1156 189 32 14 chr15 60997197 60997417 -42497557 - URR1B DNA MER1_type -1 224 1 7 1050 279 363 58 37 chr15 60997715 60998041 -42496933 + L2 LINE L2 2253 2585 -834 7 1050 243 288 41 0 chr15 60998133 60998206 -42496768 + LTR33 LTR ERVL 2 77 -438 7 1050 320 104 0 0 chr15 60998481 60998529 -42496445 - ORR1B2 LTR MaLR -8 359 312 7 1050 826 173 17 11 chr15 60998536 60998711 -42496263 - Lx2B LINE L1 -2 6998 6823 7 1050 1463 142 13 17 chr15 60998711 60998947 -42496027 + Lx2 LINE L1 6296 6530 -467 7 1050 1311 195 115 23 chr15 60998947 60999046 -42495928 - ORR1B2 LTR MaLR -34 333 232 7 1050 3436 16 45 0 chr15 60999046 60999425 -42495549 + MTA_Mm LTR MaLR 1 396 0 7 1050 1311 195 115 23 chr15 60999425 60999630 -42495344 - ORR1B2 LTR MaLR -136 231 1 7 1050 209 265 0 0 chr15 60999697 60999746 -42495228 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1050 539 117 47 0 chr15 60999762 60999890 -42495084 + (TCTA)n Simple_repeat Simple_repeat 4 137 0 7 1050 266 359 48 55 chr15 61000299 61000464 -42494510 + B4A SINE B4 2 165 -127 1 1050 182 331 152 51 chr15 61001513 61001691 -42493283 - MIRb SINE MIR -47 221 26 2 1050 180 319 116 0 chr15 61002554 61002623 -42492351 - L2c LINE L2 -43 3344 3268 3 1050 397 358 56 6 chr15 61002702 61002882 -42492092 - MIRc SINE MIR -36 232 44 4 1050 714 314 78 19 chr15 61005237 61005714 -42489260 - L1MB3 LINE L1 -25 6158 5654 5 1050 4128 84 26 2 chr15 61007012 61007585 -42487389 + L1_Mus4 LINE L1 6047 6633 -3 6 1050 656 24 12 0 chr15 61009129 61009211 -42485763 + (TA)n Simple_repeat Simple_repeat 1 83 0 7 1050 183 80 0 0 chr15 61009622 61009647 -42485327 + (TG)n Simple_repeat Simple_repeat 1 25 0 8 1050 624 116 0 0 chr15 61009649 61009744 -42485230 + (GA)n Simple_repeat Simple_repeat 2 96 0 9 1050 329 113 0 19 chr15 61010014 61010068 -42484906 + HAL1-3A_ME LINE L1 1976 2028 -830 1 1050 429 362 75 6 chr15 61010121 61010282 -42484692 + B4A SINE B4 90 261 -31 1 1050 220 319 113 42 chr15 61010949 61011162 -42483812 - MIRb SINE MIR -21 247 20 1 1050 220 308 15 0 chr15 61011214 61011279 -42483695 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 1 1050 3753 37 11 2 chr15 61011423 61011879 -42483095 - L1Md_F3 LINE L1 -1 6583 6124 1 1050 309 259 151 29 chr15 61012663 61012802 -42482172 - HAL1-3A_ME LINE L1 -419 2439 2284 1 1050 796 252 129 47 chr15 61012944 61013285 -42481689 + ORR1D2 LTR MaLR 2 370 0 1 1050 1323 19 0 0 chr15 61013577 61013731 -42481243 + (GA)n Simple_repeat Simple_repeat 1 154 0 1 1050 212 255 0 0 chr15 61015241 61015288 -42479686 + ID4_ SINE ID 2 48 -35 1 1050 184 396 29 29 chr15 61015419 61015523 -42479451 - MIR SINE MIR -72 136 33 1 1050 253 235 59 0 chr15 61016457 61016542 -42478432 - MER53 DNA hAT -103 90 1 2 1050 1380 246 39 37 chr15 61017559 61017914 -42477060 - ORR1D2 LTR MaLR -14 356 1 2 1050 301 282 17 8 chr15 61018399 61018517 -42476457 + (CATA)n Simple_repeat Simple_repeat 3 121 0 2 1050 314 263 12 12 chr15 61018521 61018694 -42476280 + (CATATA)n Simple_repeat Simple_repeat 6 178 0 2 1050 395 106 15 0 chr15 61018739 61018805 -42476169 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1050 2748 62 16 13 chr15 61019345 61019724 -42475250 + L1Md_F2 LINE L1 6198 6577 -5 2 1050 453 294 59 53 chr15 61020160 61020347 -42474627 + MER63A DNA AcHobo 1 188 -22 2 1050 288 0 0 0 chr15 61020659 61020691 -42474283 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1050 274 331 16 0 chr15 61021190 61021317 -42473657 - MER121 Unknown Unknown -193 219 91 2 1050 1597 113 0 4 chr15 61021802 61022059 -42472915 - L1_Mm LINE L1 -1207 4676 4421 2 1050 7214 75 10 2 chr15 61022050 61023403 -42471571 + L1_Mus1 LINE L1 5202 6567 0 3 1050 2348 107 72 3 chr15 61023421 61023796 -42471178 + RMER17B LTR ERVK 62 462 -496 3 1050 413 162 0 0 chr15 61023790 61023864 -42471110 + RMER17B LTR ERVK 885 958 0 3 1050 1010 279 67 31 chr15 61024060 61024611 -42470363 - L1MA5 LINE L1 -475 5825 5255 3 1050 695 111 0 0 chr15 61025734 61025833 -42469141 - B2_Mm2 SINE B2 -96 99 1 3 1050 243 0 0 0 chr15 61026035 61026062 -42468912 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 3 1050 3052 26 0 0 chr15 61026928 61027274 -42467700 - ORR1A0 LTR MaLR 0 346 1 3 1050 1771 188 14 51 chr15 61027422 61027775 -42467199 + ORR1C1 LTR MaLR 1 340 -38 3 1050 826 190 0 14 chr15 61027779 61027918 -42467056 + B1_Mur2 SINE Alu 12 148 -1 3 1050 183 139 0 0 chr15 61027919 61027955 -42467019 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1050 238 121 0 0 chr15 61028142 61028175 -42466799 + ORR1C1 LTR MaLR 346 378 0 3 1050 250 344 56 34 chr15 61028426 61028515 -42466459 + MIR SINE MIR 16 112 -156 3 1050 277 341 30 53 chr15 61028651 61028784 -42466190 - B2_Mm2 SINE B2 -33 162 33 4 1050 706 188 8 0 chr15 61028809 61028926 -42466048 - B1_Mus2 SINE Alu -1 146 29 4 1050 295 231 0 44 chr15 61028912 61028980 -42465994 - B2_Mm2 SINE B2 -130 65 1 4 1050 3999 88 0 7 chr15 61029368 61029916 -42465058 - L1Md_F2 LINE L1 -11 6571 6028 4 1050 25226 75 3 1 chr15 61029917 61033532 -42461442 - L1Md_F LINE L1 -861 5022 1402 4 1050 567 101 0 0 chr15 61033529 61033608 -42461366 - L1Md_F LINE L1 -6151 465 387 4 1050 388 321 141 40 chr15 61033671 61034018 -42460956 - L2 LINE L2 -540 2879 2498 4 1050 421 302 97 54 chr15 61034093 61034352 -42460622 + Lx8 LINE L1 6049 6318 -1155 4 1050 3552 95 6 25 chr15 61034352 61034907 -42460067 - L1_Mus1 LINE L1 0 6567 6059 4 1050 3144 58 0 0 chr15 61034907 61035320 -42459654 + L1Md_F2 LINE L1 5680 6092 -490 4 1050 276 264 0 0 chr15 61035741 61035866 -42459108 + (CA)n Simple_repeat Simple_repeat 2 126 0 4 1050 245 211 0 19 chr15 61035883 61035936 -42459038 + RMER19B LTR ERVK 1 52 -850 5 1050 1874 122 0 17 chr15 61035932 61036225 -42458749 + RMER19B LTR ERVK 615 902 0 5 1050 222 37 0 0 chr15 61036305 61036332 -42458642 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 5 1050 279 284 0 0 chr15 61037224 61037351 -42457623 + (CA)n Simple_repeat Simple_repeat 2 128 0 5 1050 24 0 0 0 chr15 61038457 61038481 -42456493 + AT_rich Low_complexity Low_complexity 1 24 0 5 1050 227 38 18 71 chr15 61039875 61039931 -42455043 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 5 1050 202 326 0 21 chr15 61040623 61040717 -42454257 + CT-rich Low_complexity Low_complexity 2 93 0 5 1050 284 314 93 36 chr15 61040918 61041057 -42453917 + L2a LINE L2 3262 3408 -18 5 1050 301 385 149 10 chr15 61041258 61041547 -42453427 + LTR16C LTR ERVL 125 453 -36 5 1050 999 190 37 23 chr15 61042497 61042713 -42452261 - Lx2 LINE L1 -1 6996 6778 5 1050 2193 106 12 0 chr15 61042716 61043036 -42451938 - Lx2 LINE L1 -354 6643 6320 5 1050 597 318 114 129 chr15 61043810 61044283 -42450691 + MLT1F2 LTR MaLR 66 531 -29 6 1050 396 0 0 0 chr15 61044783 61044827 -42450147 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1050 271 304 22 154 chr15 61044882 61045018 -42449956 + RSINE1 SINE B4 48 165 0 6 1050 318 50 0 0 chr15 61045038 61045078 -42449896 + (TAA)n Simple_repeat Simple_repeat 1 40 0 6 1050 297 296 23 0 chr15 61045085 61045173 -42449801 + RMER30 DNA MER1_type 112 201 -1 6 1050 375 290 30 10 chr15 61045225 61045326 -42449648 - MER5B DNA MER1_type -72 106 4 6 1050 243 327 29 19 chr15 61046364 61046467 -42448507 + L3 LINE CR1 4380 4483 -6 6 1050 185 243 21 0 chr15 61046548 61046602 -42448372 - L2a LINE L2 -1 3425 3328 6 1050 407 324 110 9 chr15 61046796 61047014 -42447960 - L1M4 LINE L1 -1533 4613 4374 6 1050 2761 290 52 24 chr15 61047187 61047761 -42447213 - Lx8 LINE L1 -156 7317 6739 6 1050 1003 209 51 0 chr15 61047761 61047976 -42446998 + URR1A DNA MER1_type 1 226 0 7 1050 2761 290 52 24 chr15 61047976 61048437 -42446537 - Lx8 LINE L1 -735 6738 6253 6 1050 1155 115 16 11 chr15 61048512 61048697 -42446277 + B2_Mm2 SINE B2 3 188 -7 7 1050 592 229 0 48 chr15 61048826 61048973 -42446001 - RMER1C Other Other 0 1342 1203 7 1050 218 105 26 0 chr15 61048973 61049011 -42445963 + (GGA)n Simple_repeat Simple_repeat 1 39 0 7 1050 523 126 21 0 chr15 61049038 61049133 -42445841 + (GA)n Simple_repeat Simple_repeat 2 98 0 7 1050 2460 246 100 24 chr15 61049142 61049895 -42445079 - RMER1C Other Other -117 1225 416 7 1050 444 295 108 8 chr15 61050163 61050525 -42444449 - L1M4 LINE L1 -2091 4055 3658 6 1050 226 225 96 36 chr15 61050599 61050682 -42444292 + L1M4 LINE L1 1418 1505 -5037 7 1050 213 39 0 0 chr15 61051358 61051384 -42443590 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 7 1050 247 367 35 96 chr15 61052713 61052942 -42442032 - MIRc SINE MIR -5 263 49 7 1050 889 234 29 15 chr15 61053501 61053705 -42441269 + ID_B1 SINE B4 15 221 -3 7 1050 302 261 115 54 chr15 61054067 61054244 -42440730 - MIR SINE MIR -42 226 29 7 1050 213 217 0 21 chr15 61056396 61056443 -42438531 + L2b LINE L2 3330 3375 0 8 1050 350 309 52 0 chr15 61057748 61057845 -42437129 - PB1D10 SINE Alu -13 104 3 8 1050 1068 57 31 19 chr15 61057874 61058036 -42436938 + L1_Mus3 LINE L1 6474 6637 -1 8 1050 218 258 15 75 chr15 61058384 61058451 -42436523 - RSINE1 SINE B4 -28 137 75 8 1050 330 279 109 7 chr15 61058948 61059085 -42435889 + MIRb SINE MIR 102 252 -16 8 1050 305 336 0 41 chr15 61059609 61059730 -42435244 + L1M5 LINE L1 2335 2450 -3696 8 1050 180 0 0 0 chr15 61059793 61059813 -42435161 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 1050 1947 299 90 30 chr15 61059852 61060727 -42434247 + Lx8 LINE L1 6544 7471 -2 8 1050 315 237 17 0 chr15 61060888 61060947 -42434027 + HAL1-3A_ME LINE L1 1979 2038 -820 8 1050 499 229 86 0 chr15 61060964 61061069 -42433905 + B4A SINE B4 84 197 -95 8 1050 362 124 33 11 chr15 61061910 61062000 -42432974 + (TG)n Simple_repeat Simple_repeat 1 92 0 9 1050 447 275 94 78 chr15 61062042 61062323 -42432651 - B4 SINE B4 -6 286 4 9 1050 190 356 61 7 chr15 61064961 61065108 -42429866 + MIR SINE MIR 54 208 -54 9 1050 576 289 61 6 chr15 61065182 61065363 -42429611 + B3A SINE B2 2 192 -6 9 1050 180 0 0 0 chr15 61065497 61065517 -42429457 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 9 1050 23 0 0 0 chr15 61065530 61065553 -42429421 + AT_rich Low_complexity Low_complexity 1 23 0 9 1050 394 265 31 0 chr15 61065815 61065913 -42429061 - BC1_Mm scRNA scRNA -51 101 1 9 1050 1832 52 4 0 chr15 61066002 61066232 -42428742 + L1_Mus1 LINE L1 6336 6566 -1 9 1050 378 0 0 0 chr15 61066416 61066458 -42428516 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 1050 440 336 67 129 chr15 61066902 61067029 -42427945 - MLT1C LTR MaLR -113 354 239 9 1050 852 239 96 0 chr15 61067029 61067217 -42427757 + B3 SINE B2 2 207 -9 1 1050 440 336 67 129 chr15 61067217 61067461 -42427513 - MLT1C LTR MaLR -229 238 6 9 1050 257 48 48 0 chr15 61067837 61067879 -42427095 + (CAAAAA)n Simple_repeat Simple_repeat 3 46 0 1 1050 779 303 36 60 chr15 61067939 61068241 -42426733 + MLT2B2 LTR ERVL 219 513 -2 1 1050 1029 104 28 0 chr15 61069113 61069257 -42425717 + B1_Mus1 SINE Alu 1 148 0 1 1050 195 129 0 0 chr15 61069259 61069290 -42425684 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 1 1050 591 295 115 47 chr15 61069530 61069783 -42425191 - MLT1A1 LTR MaLR -6 402 133 1 1050 5093 114 68 84 chr15 61069825 61070113 -42424861 + RMER17B LTR ERVK 1 297 -661 1 1050 1005 30 114 0 chr15 61070113 61070245 -42424729 + B1_Mm SINE Alu 1 147 0 1 1050 5093 114 68 84 chr15 61070245 61070930 -42424044 + RMER17B LTR ERVK 298 958 0 1 1050 302 333 0 10 chr15 61071901 61072004 -42422970 + MIR3 SINE MIR 96 197 -11 1 1050 523 333 43 60 chr15 61073301 61073601 -42421373 - MLT1J2 LTR MaLR -146 302 8 1 1050 402 228 0 0 chr15 61074210 61074311 -42420663 + (TA)n Simple_repeat Simple_repeat 1 101 0 1 1050 234 326 123 36 chr15 61074327 61074604 -42420370 - L1MA8 LINE L1 -37 6254 5954 1 1050 407 299 71 28 chr15 61074777 61074918 -42420056 + MTE-int LTR MaLR 1 147 -1433 1 1050 266 125 21 0 chr15 61074962 61075010 -42419964 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 1050 441 36 0 0 chr15 61075014 61075069 -42419905 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1050 1077 8 0 0 chr15 61075178 61075300 -42419674 + (GA)n Simple_repeat Simple_repeat 1 122 0 1 1050 1105 340 66 61 chr15 61075301 61075922 -42419052 + MTE-int LTR MaLR 479 1073 -507 1 1050 1367 257 23 121 chr15 61075924 61076451 -42418523 - RMER15 LTR ERVL -74 501 27 1 1050 625 300 165 23 chr15 61076599 61076939 -42418035 + MTE-int LTR MaLR 918 1450 -130 1 1050 37 39 0 0 chr15 61076950 61077001 -42417973 + AT_rich Low_complexity Low_complexity 1 51 0 1 1050 468 275 109 60 chr15 61077192 61077393 -42417581 + RMER5 LTR ERV1 72 282 -252 1 1050 458 268 38 75 chr15 61077691 61077824 -42417150 + RMER10B LTR ERVL 271 398 0 1 1050 561 227 46 7 chr15 61077831 61077982 -42416992 + RMER5 LTR ERV1 332 488 -46 1 1050 368 157 24 24 chr15 61078803 61078888 -42416086 + Lx6 LINE L1 7376 7460 0 1 1050 23 0 0 0 chr15 61078947 61078970 -42416004 + AT_rich Low_complexity Low_complexity 1 23 0 1 1051 3814 117 55 12 chr15 61079676 61080280 -42414694 + L1_Mus3 LINE L1 6009 6638 0 1 1051 180 333 37 0 chr15 61080528 61080609 -42414365 + MIRc SINE MIR 66 149 -119 1 1051 199 293 34 68 chr15 61081725 61081813 -42413161 - L2c LINE L2 -1 3386 3302 1 1051 10994 50 11 1 chr15 61081873 61083985 -42410989 - L1Md_F2 LINE L1 0 6582 4446 1 1051 228 200 0 0 chr15 61084079 61084124 -42410850 - MT2A LTR ERVL 0 533 489 1 1051 627 14 0 0 chr15 61084124 61084196 -42410778 + (TC)n Simple_repeat Simple_repeat 1 72 0 1 1051 654 110 25 19 chr15 61084196 61084353 -42410621 + (TCTA)n Simple_repeat Simple_repeat 4 161 0 1 1051 1680 113 0 15 chr15 61084383 61084652 -42410322 + L1_Mus4 LINE L1 6365 6629 -7 1 1051 571 220 0 48 chr15 61084652 61084776 -42410198 - MT2A LTR ERVL -415 118 1 1 1051 2493 289 68 30 chr15 61086059 61086958 -42408016 + Lx8 LINE L1 6536 7468 -5 1 1051 414 279 92 9 chr15 61087329 61087546 -42407428 + MER5C DNA MER1_type 78 312 -1 1 1051 967 298 35 89 chr15 61088022 61088538 -42406436 + L1M2 LINE L1 4473 4960 -1183 1 1051 328 284 97 23 chr15 61089047 61089263 -42405711 + L1M2 LINE L1 5282 5513 -655 1 1051 350 301 53 79 chr15 61089530 61089833 -42405141 + L1MA6 LINE L1 5647 5941 -359 1 1051 246 364 49 50 chr15 61090981 61091173 -42403801 - MIRc SINE MIR -67 201 8 1 1051 1184 71 0 56 chr15 61091684 61091863 -42403111 + L1_Mus1 LINE L1 6399 6567 0 1 1051 252 86 0 0 chr15 61091894 61091929 -42403045 + (GGAA)n Simple_repeat Simple_repeat 3 37 0 1 1051 269 296 36 24 chr15 61091990 61092073 -42402901 + L2b LINE L2 3291 3374 -1 1 1051 617 350 72 30 chr15 61092357 61092761 -42402213 - LTR37A LTR ERV1 0 426 6 1 1051 491 281 85 70 chr15 61092885 61093084 -42401890 + B3A SINE B2 1 202 -14 1 1051 363 44 0 0 chr15 61094174 61094219 -42400755 + (TTA)n Simple_repeat Simple_repeat 1 45 0 1 1051 506 265 127 58 chr15 61094305 61094565 -42400409 - B4 SINE B4 -13 279 2 1 1051 291 321 119 0 chr15 61094803 61094887 -42400087 - MER5A DNA MER1_type -49 140 47 1 1051 531 0 0 0 chr15 61096259 61096318 -42398656 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 1051 756 262 38 108 chr15 61098403 61098690 -42396284 - MTE2a LTR MaLR -5 374 108 1 1051 375 343 0 99 chr15 61098778 61098979 -42395995 + B4A SINE B4 27 207 -85 1 1051 308 43 22 0 chr15 61099019 61099065 -42395909 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 1 1051 588 146 0 0 chr15 61099161 61099264 -42395710 + (GA)n Simple_repeat Simple_repeat 1 103 0 1 1051 234 221 72 14 chr15 61099379 61099448 -42395526 - MLT2E LTR ERVL -49 579 507 1 1051 393 22 0 0 chr15 61099697 61099743 -42395231 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1051 883 284 27 12 chr15 61100432 61100689 -42394285 + MTE2b LTR MaLR 105 365 -14 1 1051 21 0 0 0 chr15 61100969 61100990 -42393984 + AT_rich Low_complexity Low_complexity 1 21 0 1 1051 713 232 30 149 chr15 61101589 61101958 -42393016 + Lx6 LINE L1 7135 7459 -1 1 1051 319 311 9 19 chr15 61102131 61102239 -42392735 + PB1D10 SINE Alu 1 107 -10 1 1051 263 312 43 0 chr15 61102614 61102707 -42392267 - MIRb SINE MIR -17 251 155 1 1051 213 39 0 0 chr15 61103045 61103071 -42391903 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 1 1051 657 25 0 0 chr15 61103199 61103278 -42391696 + (CA)n Simple_repeat Simple_repeat 2 80 0 1 1051 225 393 38 62 chr15 61104884 61104988 -42389986 + MER5A DNA MER1_type 34 142 -47 1 1051 974 280 126 18 chr15 61104988 61105322 -42389652 - ORR1D2 LTR MaLR 0 370 1 1 1051 225 393 38 62 chr15 61105322 61105377 -42389597 + MER5A DNA MER1_type 143 189 0 1 1051 1199 110 0 52 chr15 61107113 61107305 -42387669 + L1_Mus2 LINE L1 6383 6564 -2 1 1051 29603 70 37 6 chr15 61107409 61111822 -42383152 - L1Md_F2 LINE L1 -2 6580 1999 1 1051 2317 69 119 11 chr15 61111822 61112174 -42382800 + RLTR10 LTR ERVK 1 390 0 1 1051 13024 99 3 2 chr15 61112174 61113869 -42381105 - L1Md_F2 LINE L1 -3885 1998 301 1 1051 557 198 0 0 chr15 61113867 61113983 -42380991 - L1Md_F LINE L1 -6190 329 214 1 1051 258 281 108 35 chr15 61113991 61114194 -42380780 - L1M5 LINE L1 -2233 3913 3696 1 1051 427 306 121 87 chr15 61114244 61114509 -42380465 + B4A SINE B4 1 274 -18 1 1051 33373 72 3 14 chr15 61114741 61120907 -42374067 - L1Md_F2 LINE L1 0 6582 487 1 1051 35 0 0 0 chr15 61121015 61121050 -42373924 + AT_rich Low_complexity Low_complexity 1 35 0 1 1051 630 190 35 0 chr15 61121138 61121280 -42373694 + Lx9 LINE L1 7326 7472 -172 1 1051 249 333 67 100 chr15 61121607 61121727 -42373247 + B4A SINE B4 33 148 -144 1 1051 237 379 39 70 chr15 61121775 61121931 -42373043 - LTR16A LTR ERVL -253 198 48 1 1051 4376 141 74 37 chr15 61122851 61123721 -42371253 + RMER17A2 LTR ERVK 5 906 0 1 1051 1791 176 3 46 chr15 61123796 61124142 -42370832 - Lx5 LINE L1 -85 6965 6635 1 1051 2377 210 57 12 chr15 61124140 61124705 -42370269 + RMER1C Other Other 753 1342 0 1 1051 261 0 0 0 chr15 61124719 61124748 -42370226 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1051 707 249 39 81 chr15 61124748 61125080 -42369894 + L1MC LINE L1 4628 4945 -1201 1 1051 301 323 3 49 chr15 61125183 61125388 -42369586 + GA-rich Low_complexity Low_complexity 1 195 0 1 1051 197 420 26 35 chr15 61125671 61125787 -42369187 + MIRb SINE MIR 3 117 -151 1 1051 190 83 0 0 chr15 61125845 61125869 -42369105 + MIRm SINE MIR 225 248 -28 1 1051 848 336 25 11 chr15 61127358 61127632 -42367342 - B4A SINE B4 -14 278 1 1 1051 345 24 0 0 chr15 61127789 61127831 -42367143 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1051 270 0 0 0 chr15 61128064 61128094 -42366880 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1051 236 378 62 14 chr15 61128922 61129067 -42365907 + MLT1F1 LTR MaLR 383 534 -35 1 1051 208 370 0 0 chr15 61129573 61129654 -42365320 - L2a LINE L2 -1 3425 3345 1 1051 264 77 0 0 chr15 61130080 61130119 -42364855 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1051 698 212 13 40 chr15 61130424 61130576 -42364398 + B1_Mur3 SINE Alu 1 148 -1 1 1051 263 300 0 36 chr15 61130614 61130697 -42364277 - PB1D7 SINE Alu -8 112 33 1 1051 491 290 47 67 chr15 61133469 61133686 -42361288 + B3A SINE B2 1 188 -5 1 1051 505 242 107 0 chr15 61134065 61134243 -42360731 - L1MA8 LINE L1 -402 5889 5693 1 1051 205 324 41 27 chr15 61134421 61134494 -42360480 + MER5A DNA MER1_type 85 158 -31 1 1051 494 31 16 0 chr15 61135956 61136020 -42358954 + (TCCC)n Simple_repeat Simple_repeat 4 68 0 1 1051 1027 333 18 5 chr15 61136750 61137139 -42357835 - Lx9 LINE L1 -841 6803 6410 1 1051 1358 294 110 41 chr15 61137337 61137980 -42356994 + Lx9 LINE L1 6807 7475 -169 1 1051 231 36 0 0 chr15 61137980 61138008 -42356966 + (CATA)n Simple_repeat Simple_repeat 1 28 0 1 1051 1358 294 110 41 chr15 61138008 61138143 -42356831 + Lx9 LINE L1 7476 7638 -6 1 1051 370 316 11 0 chr15 61138271 61138366 -42356608 + PB1D10 SINE Alu 7 102 -15 1 1051 261 260 95 73 chr15 61138651 61138788 -42356186 - MIR SINE MIR -121 141 2 1 1051 296 48 24 0 chr15 61138880 61138922 -42356052 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 1051 4325 241 65 20 chr15 61138971 61140415 -42354559 - Lx5 LINE L1 -2 7048 5514 1 1051 2319 139 32 30 chr15 61144248 61144648 -42350326 - MTB_Mm LTR MaLR 0 407 7 1 1051 313 327 58 18 chr15 61144899 61145070 -42349904 - L1ME3B LINE L1 -358 5882 5705 1 1051 221 370 0 12 chr15 61145115 61145197 -42349777 - L2 LINE L2 -1037 2382 2302 1 1051 1003 178 6 0 chr15 61145405 61145579 -42349395 + B2_Mm2 SINE B2 2 176 -19 2 1051 430 350 144 24 chr15 61146094 61146690 -42348284 - L2 LINE L2 -709 2710 2043 2 1051 247 291 120 0 chr15 61146939 61147056 -42347918 - Tigger13a DNA MER2_type -259 512 382 2 1051 317 293 119 13 chr15 61147078 61147188 -42347786 - Lx6 LINE L1 -4 7456 7346 2 1051 465 19 0 0 chr15 61147188 61147242 -42347732 + (TC)n Simple_repeat Simple_repeat 1 54 0 2 1051 1005 230 187 6 chr15 61147242 61147498 -42347476 - Lx6 LINE L1 -115 7345 7033 2 1051 228 321 35 18 chr15 61148001 61148115 -42346859 + L1ME2 LINE L1 5996 6111 -53 2 1051 22 35 0 0 chr15 61148129 61148158 -42346816 + AT_rich Low_complexity Low_complexity 1 29 0 2 1051 1681 65 5 9 chr15 61148213 61148432 -42346542 - L1_Mus1 LINE L1 0 6567 6350 2 1051 273 229 52 13 chr15 61149599 61149690 -42345284 - MLT1A0 LTR MaLR -25 442 288 2 1051 650 266 63 15 chr15 61150204 61150405 -42344569 + MTEa LTR MaLR 140 379 0 2 1051 249 184 0 125 chr15 61150914 61150970 -42344004 - Arthur1C DNA Tip100 -304 59 11 2 1051 483 291 51 0 chr15 61151367 61151563 -42343411 + L1MC1 LINE L1 5898 6103 -230 2 1051 847 315 110 12 chr15 61151563 61151891 -42343083 - MLT1A0 LTR MaLR 0 365 6 2 1051 1487 231 19 3 chr15 61152082 61152391 -42342583 + MTC LTR MaLR 1 314 -107 2 1051 225 65 0 0 chr15 61152391 61152422 -42342552 + (TC)n Simple_repeat Simple_repeat 1 31 0 2 1051 1444 102 173 17 chr15 61152427 61152716 -42342258 - Lx LINE L1 -2 6652 6319 2 1051 747 176 24 18 chr15 61152716 61152887 -42342087 + MTC LTR MaLR 213 421 0 2 1051 580 272 218 0 chr15 61152986 61153243 -42341731 - MER34A LTR ERV1 -229 342 30 2 1051 198 0 0 0 chr15 61153442 61153464 -42341510 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 1051 360 0 0 0 chr15 61153726 61153766 -42341208 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 2 1051 2728 144 87 8 chr15 61153964 61154447 -42340527 + Lx2B LINE L1 6479 6999 -1 2 1051 288 20 0 89 chr15 61154685 61154741 -42340233 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 2 1051 295 290 68 29 chr15 61155333 61155436 -42339538 - Cheshire DNA MER1_type -2136 284 178 2 1051 429 300 103 12 chr15 61156057 61156421 -42338553 - Lx8 LINE L1 -145 7328 6910 2 1051 2151 213 17 43 chr15 61157019 61157535 -42337439 - Lx5 LINE L1 -98 6952 6450 2 1051 444 37 0 0 chr15 61157707 61157761 -42337213 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 1051 261 0 0 0 chr15 61157849 61157878 -42337096 + (ACTG)n Simple_repeat Simple_repeat 4 32 0 2 1051 240 364 115 0 chr15 61158056 61158221 -42336753 - L3 LINE CR1 -123 4366 4183 2 1051 1814 260 63 23 chr15 61158235 61158929 -42336045 - L1MA7 LINE L1 -13 6278 5557 2 1051 457 348 29 5 chr15 61160291 61160496 -42334478 - B3 SINE B2 -6 210 1 2 1051 553 325 6 6 chr15 61160555 61160716 -42334258 - B3A SINE B2 -36 162 2 2 1051 237 356 50 0 chr15 61160983 61161084 -42333890 + LTR37A LTR ERV1 7 112 -314 2 1051 237 119 0 0 chr15 61161346 61161388 -42333586 + (CAAT)n Simple_repeat Simple_repeat 2 43 0 2 1051 551 315 110 23 chr15 61161822 61162121 -42332853 + MLT1A1 LTR MaLR 84 408 0 2 1051 537 324 68 51 chr15 61163827 61164178 -42330796 + ORR1E LTR MaLR 4 379 0 2 1051 351 361 27 27 chr15 61164371 61164596 -42330378 - MLT2C1 LTR ERVL -171 226 2 2 1051 2017 245 13 34 chr15 61164788 61165316 -42329658 - Lx5 LINE L1 -3 7047 6531 2 1051 1038 221 27 50 chr15 61165728 61166089 -42328885 - Lx7 LINE L1 -52 7644 7107 2 1051 480 111 0 0 chr15 61166146 61166218 -42328756 + (GGA)n Simple_repeat Simple_repeat 3 74 0 2 1051 1245 96 0 0 chr15 61166218 61166396 -42328578 + (GAA)n Simple_repeat Simple_repeat 3 180 0 2 1051 180 77 0 0 chr15 61166447 61166473 -42328501 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 1051 1756 212 63 5 chr15 61166474 61166853 -42328121 - RMER5 LTR ERV1 -49 485 85 2 1051 499 308 83 34 chr15 61166950 61167155 -42327819 + ID_B1 SINE B4 2 216 -8 2 1051 888 120 28 7 chr15 61167294 61167437 -42327537 - B2_Mm2 SINE B2 -45 150 5 2 1051 22 0 0 0 chr15 61167781 61167803 -42327171 + AT_rich Low_complexity Low_complexity 1 22 0 2 1051 400 302 56 0 chr15 61168190 61168316 -42326658 + B1F2 SINE Alu 2 134 -15 2 1051 576 361 93 21 chr15 61169032 61169615 -42325359 + Charlie7 DNA MER1_type 522 1146 -1466 2 1051 450 235 19 74 chr15 61170088 61170359 -42324615 - Lx7 LINE L1 0 7696 7441 2 1051 860 248 66 4 chr15 61170433 61170660 -42324314 + Charlie7 DNA MER1_type 1610 1850 -762 2 1051 183 341 0 0 chr15 61171178 61171222 -42323752 - MIR SINE MIR -87 121 78 2 1051 214 289 100 0 chr15 61172624 61172714 -42322260 - MIRb SINE MIR -39 229 131 2 1051 1262 237 64 7 chr15 61172771 61173068 -42321906 - MTEb LTR MaLR 0 379 66 2 1051 1105 84 6 18 chr15 61174429 61174598 -42320376 - Lx2 LINE L1 -163 6834 6668 2 1051 242 328 45 76 chr15 61176147 61176437 -42318537 + Charlie5 DNA MER1_type 2337 2617 -7 2 1051 186 351 38 25 chr15 61176923 61177002 -42317972 + L2b LINE L2 3258 3337 -38 2 1051 404 356 65 40 chr15 61177166 61177415 -42317559 - MIR SINE MIR -3 265 5 2 1051 906 306 43 25 chr15 61177514 61177836 -42317138 - MTEb LTR MaLR -8 371 44 2 1051 691 229 130 5 chr15 61178018 61178202 -42316772 + B3 SINE B2 10 216 0 2 1051 212 200 42 14 chr15 61178456 61178527 -42316447 + (TA)n Simple_repeat Simple_repeat 2 74 0 2 1051 10947 160 23 29 chr15 61178897 61181416 -42313558 + Lx2B LINE L1 3613 6122 -878 2 1051 524 267 0 16 chr15 61182266 61182388 -42312586 - B1_Mur1 SINE Alu -1 148 29 2 1051 423 0 0 0 chr15 61185115 61185162 -42309812 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1051 332 367 78 28 chr15 61185254 61185509 -42309465 + L3 LINE CR1 4109 4376 -113 2 1051 261 288 0 0 chr15 61185824 61185890 -42309084 + L2b LINE L2 2978 3043 -332 2 1051 593 279 111 44 chr15 61185960 61186418 -42308556 + L1MA7 LINE L1 5803 6291 0 2 1051 269 245 0 54 chr15 61186467 61186523 -42308451 - Charlie12 DNA MER1_type -9 2864 2812 2 1051 354 348 0 0 chr15 61187316 61187434 -42307540 + MIRc SINE MIR 3 120 -148 2 1051 408 20 0 0 chr15 61189303 61189352 -42305622 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1051 476 305 69 101 chr15 61189517 61189672 -42305302 - B4 SINE B4 -22 270 129 2 1051 342 0 0 0 chr15 61189672 61189710 -42305264 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1051 476 305 69 101 chr15 61189710 61189733 -42305241 - B4 SINE B4 -164 128 103 2 1051 1183 62 7 0 chr15 61189733 61189878 -42305096 - B1_Mm SINE Alu 0 147 2 2 1051 476 305 69 101 chr15 61189878 61189975 -42304999 - B4 SINE B4 -190 102 3 2 1051 247 278 14 0 chr15 61190979 61191051 -42303923 + CT-rich Low_complexity Low_complexity 2 74 0 2 1051 3856 132 39 17 chr15 61191616 61192155 -42302819 + Lx2 LINE L1 6330 6866 -131 2 1051 255 61 0 0 chr15 61192155 61192188 -42302786 + (TGGG)n Simple_repeat Simple_repeat 1 33 0 2 1051 3856 132 39 17 chr15 61192188 61192290 -42302684 + Lx2 LINE L1 6867 6983 -14 2 1051 1935 153 18 6 chr15 61192313 61192642 -42302332 + Lx2 LINE L1 6665 6997 0 2 1051 359 355 0 0 chr15 61192776 61192897 -42302077 + MLT1A0 LTR MaLR 238 358 -7 2 1051 262 239 14 27 chr15 61193148 61193221 -42301753 + ID4 SINE ID 1 72 -11 2 1051 23 54 0 0 chr15 61193232 61193269 -42301705 + AT_rich Low_complexity Low_complexity 1 37 0 2 1051 225 288 45 0 chr15 61193528 61193594 -42301380 - ID4 SINE ID -13 70 2 2 1051 234 250 104 8 chr15 61193910 61194035 -42300939 + Lx4B LINE L1 6921 7057 -1 2 1051 249 310 28 0 chr15 61194152 61194223 -42300751 + ID2 SINE ID 1 73 -10 2 1051 392 343 78 22 chr15 61194272 61194451 -42300523 + MER58A DNA MER1_type 31 219 -5 2 1051 183 129 0 0 chr15 61194684 61194715 -42300259 + (GGA)n Simple_repeat Simple_repeat 2 32 0 2 1051 220 361 112 19 chr15 61195605 61195811 -42299163 + L2a LINE L2 3202 3426 0 2 1051 223 328 54 38 chr15 61195876 61196012 -42298962 + MIRc SINE MIR 49 181 -95 2 1051 216 0 0 0 chr15 61198377 61198401 -42296573 + (TAAAAA)n Simple_repeat Simple_repeat 6 29 0 2 1051 622 311 105 18 chr15 61198638 61199077 -42295897 + Lx8 LINE L1 5413 5920 -1553 2 1051 545 350 112 15 chr15 61199397 61199430 -42295544 + MLT1C LTR MaLR 173 208 -259 2 1051 3640 57 0 2 chr15 61199430 61199889 -42295085 + L1Md_F3 LINE L1 6127 6584 0 2 1051 545 350 112 15 chr15 61199889 61200122 -42294852 + MLT1C LTR MaLR 209 465 -2 2 1051 750 312 54 25 chr15 61200672 61201079 -42293895 - Lx8 LINE L1 -205 7268 6850 2 1051 205 159 45 0 chr15 61201605 61201649 -42293325 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1051 525 312 45 0 chr15 61202339 61202496 -42292478 + RSINE1 SINE B4 2 165 0 2 1051 21 0 0 0 chr15 61202730 61202751 -42292223 + AT_rich Low_complexity Low_complexity 1 21 0 2 1051 294 297 0 0 chr15 61203670 61203744 -42291230 + L3b LINE CR1 44 117 -365 2 1051 436 291 0 9 chr15 61204417 61204528 -42290446 + PB1D10 SINE Alu 1 110 -7 2 1051 3796 246 24 34 chr15 61204596 61205535 -42289439 - Lx5 LINE L1 -4 7046 6122 2 1051 414 0 0 0 chr15 61205535 61205581 -42289393 + (TC)n Simple_repeat Simple_repeat 1 46 0 2 1051 3796 246 24 34 chr15 61205581 61205640 -42289334 - Lx5 LINE L1 -929 6121 6059 2 1051 6089 55 2 1 chr15 61205754 61206559 -42288415 + L1Md_F3 LINE L1 4781 5586 -297 2 1051 8282 32 1 4 chr15 61206561 61207546 -42287428 + L1Md_F3 LINE L1 5589 6570 -14 2 1051 265 340 53 53 chr15 61207934 61208086 -42286888 + LTR40a LTR ERVL 1 152 -367 2 1051 475 360 73 48 chr15 61208120 61208409 -42286565 + LTR40a LTR ERVL 224 519 0 2 1051 275 398 44 0 chr15 61208642 61208755 -42286219 - PB1 SINE Alu -9 118 1 2 1051 193 312 105 57 chr15 61208915 61209163 -42285811 + L2 LINE L2 1906 2165 -1254 2 1051 878 122 14 0 chr15 61209183 61209330 -42285644 + (TTCC)n Simple_repeat Simple_repeat 1 149 0 2 1051 4257 142 25 4 chr15 61209349 61210071 -42284903 - Lx2 LINE L1 -1 6996 6260 3 1051 2256 63 33 10 chr15 61210149 61210454 -42284520 + L1Md_F2 LINE L1 6269 6580 -2 3 1052 2218 16 0 0 chr15 61211001 61211252 -42283722 + L1Md_A LINE L1 6331 6581 -1 3 1052 427 336 92 17 chr15 61211475 61211651 -42283323 + Lx8 LINE L1 6763 6957 -516 3 1052 366 23 0 0 chr15 61211651 61211694 -42283280 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1052 427 336 92 17 chr15 61211694 61211877 -42283097 + Lx8 LINE L1 6958 7148 -325 3 1052 180 361 0 27 chr15 61212092 61212166 -42282808 + MIRm SINE MIR 193 264 -12 3 1052 538 298 14 101 chr15 61213102 61213319 -42281655 + B3A SINE B2 8 205 -11 3 1052 540 0 0 0 chr15 61214029 61214089 -42280885 + (TA)n Simple_repeat Simple_repeat 1 60 0 3 1052 31 0 0 0 chr15 61214195 61214226 -42280748 + AT_rich Low_complexity Low_complexity 1 31 0 3 1052 321 26 0 0 chr15 61215117 61215155 -42279819 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 3 1052 190 302 19 19 chr15 61215661 61215715 -42279259 + MIR SINE MIR 79 132 -76 3 1052 740 236 72 29 chr15 61215717 61215926 -42279048 - ORR1C2 LTR MaLR 0 384 167 3 1052 211 149 29 29 chr15 61215926 61215995 -42278979 + (CAGAGA)n Simple_repeat Simple_repeat 6 74 0 3 1052 738 109 0 0 chr15 61216022 61216132 -42278842 + (GGA)n Simple_repeat Simple_repeat 3 112 0 3 1052 738 183 108 12 chr15 61216140 61216306 -42278668 - ORR1C2 LTR MaLR -188 196 15 3 1052 4182 105 59 84 chr15 61216504 61217334 -42277640 + RMER17D2 LTR ERVK 1 809 0 3 1052 5262 33 8 14 chr15 61217413 61218062 -42276912 + L1Md_F3 LINE L1 5940 6584 0 3 1052 212 283 151 11 chr15 61218355 61218448 -42276526 - B4 SINE B4 -111 181 76 3 1052 555 16 0 0 chr15 61219651 61219715 -42275259 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 1052 5609 146 80 18 chr15 61220083 61221122 -42273852 - RLTR25A LTR ERVK 0 1103 1 3 1052 1097 83 14 0 chr15 61221457 61221602 -42273372 + B1_Mus1 SINE Alu 2 148 0 3 1052 809 158 0 13 chr15 61221602 61221756 -42273218 + GA-rich Low_complexity Low_complexity 3 154 0 3 1052 240 336 26 26 chr15 61222322 61222435 -42272539 - MIR SINE MIR -68 194 82 3 1052 270 81 0 0 chr15 61222993 61223030 -42271944 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 1052 24 32 0 0 chr15 61223976 61224007 -42270967 + AT_rich Low_complexity Low_complexity 1 31 0 3 1052 1111 306 33 31 chr15 61224215 61224694 -42270280 - L1_Rod LINE L1 0 5847 5368 3 1052 414 343 28 80 chr15 61225321 61225647 -42269327 + Lx8 LINE L1 6887 7195 -278 3 1052 266 185 52 156 chr15 61225648 61225744 -42269230 + 4.5SRNA scRNA scRNA 1 86 -8 3 1052 1080 51 0 14 chr15 61225664 61225804 -42269170 + B1_Mus1 SINE Alu 11 148 0 3 1052 549 278 92 7 chr15 61226625 61226777 -42268197 + ID_B1 SINE B4 44 208 -16 3 1052 1795 93 30 4 chr15 61227906 61228175 -42266799 - L1_Mus3 LINE L1 -5 6633 6358 3 1052 628 315 31 0 chr15 61228312 61228393 -42266581 + ID SINE ID 4 89 -135 3 1052 272 386 50 0 chr15 61228393 61228494 -42266480 + PB1D10 SINE Alu 4 109 -8 3 1052 387 0 0 0 chr15 61229256 61229299 -42265675 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1052 326 353 14 49 chr15 61229396 61229539 -42265435 - B4A SINE B4 -113 179 42 3 1052 223 385 49 8 chr15 61230107 61230230 -42264744 + MIR SINE MIR 24 151 -125 3 1052 483 18 0 0 chr15 61231028 61231084 -42263890 + (TA)n Simple_repeat Simple_repeat 1 56 0 3 1052 390 351 9 0 chr15 61231096 61231207 -42263767 - ID_B1 SINE B4 -27 197 86 3 1052 533 348 25 12 chr15 61231295 61231458 -42263516 - B3A SINE B2 -33 165 1 3 1052 484 313 85 10 chr15 61231668 61231868 -42263106 - ID_B1 SINE B4 -8 216 2 3 1052 259 276 75 22 chr15 61232100 61232221 -42262753 + MIRc SINE MIR 6 132 -136 3 1052 339 65 0 0 chr15 61232640 61232686 -42262288 + (TC)n Simple_repeat Simple_repeat 2 47 0 3 1052 390 115 0 0 chr15 61232686 61232747 -42262227 + (CA)n Simple_repeat Simple_repeat 1 61 0 3 1052 398 306 15 0 chr15 61233183 61233365 -42261609 + (GGATG)n Simple_repeat Simple_repeat 1 184 0 3 1052 359 314 59 68 chr15 61233668 61233887 -42261087 - MIRb SINE MIR -48 220 4 3 1052 258 32 0 0 chr15 61234216 61234247 -42260727 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1052 3152 16 16 0 chr15 61234282 61234651 -42260323 - L1Md_A LINE L1 0 6582 6208 3 1052 352 340 161 5 chr15 61234878 61235064 -42259910 + MIR SINE MIR 48 262 0 3 1052 306 0 0 0 chr15 61235205 61235239 -42259735 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 1052 2207 274 103 34 chr15 61235239 61236866 -42258108 - L1MC1 LINE L1 -87 6246 4502 3 1052 302 239 7 169 chr15 61237022 61237158 -42257816 - PB1 SINE Alu -2 125 12 3 1052 909 259 56 0 chr15 61237195 61237535 -42257439 - L1MC1 LINE L1 -1659 4487 4129 3 1052 7399 109 6 1 chr15 61237696 61238911 -42256063 - L1_Mus3 LINE L1 0 6638 5445 3 1052 4121 128 2 5 chr15 61238908 61239550 -42255424 + L1_Mus3 LINE L1 4800 5439 -444 3 1052 401 389 78 5 chr15 61239560 61239997 -42254977 - L1MCa LINE L1 -6038 470 2 3 1052 203 327 173 0 chr15 61240049 61240153 -42254821 - MIRb SINE MIR -121 147 26 3 1052 205 374 32 24 chr15 61240561 61240687 -42254287 + L2a LINE L2 2670 2796 -623 3 1052 3827 136 93 20 chr15 61241099 61241795 -42253179 + MTC-int LTR MaLR 394 1140 -118 3 1052 380 361 128 11 chr15 61241943 61242209 -42252765 + L2a LINE L2 2959 3255 -171 3 1052 413 275 28 21 chr15 61244305 61244446 -42250528 - MER5A1 DNA MER1_type 0 166 25 3 1052 914 294 94 29 chr15 61245201 61245575 -42249399 - MTD LTR MaLR -14 386 4 3 1052 200 137 20 0 chr15 61245907 61245958 -42249016 + T-rich Low_complexity Low_complexity 2 53 0 3 1052 4682 73 31 9 chr15 61246208 61246859 -42248115 - L1Md_F2 LINE L1 -12 6570 5906 3 1052 377 290 27 27 chr15 61247859 61247969 -42247005 + MER5B DNA MER1_type 69 178 0 3 1052 292 389 9 27 chr15 61249714 61249825 -42245149 + PB1D10 SINE Alu 6 114 -3 3 1052 198 376 94 0 chr15 61249825 61249910 -42245064 + L2b LINE L2 3242 3334 -41 3 1052 1286 160 0 39 chr15 61250165 61250241 -42244733 + RLTR28 LTR ERVL 1 74 -450 3 1052 2269 129 3 0 chr15 61250241 61250567 -42244407 + ORR1A2 LTR MaLR 1 327 0 3 1052 1286 160 0 39 chr15 61250567 61250724 -42244250 + RLTR28 LTR ERVL 75 225 -299 3 1052 1027 196 94 18 chr15 61250730 61250954 -42244020 + Lx5 LINE L1 6807 7047 -3 3 1052 1291 206 101 14 chr15 61250968 61251264 -42243710 + RLTR28 LTR ERVL 203 524 0 3 1052 332 318 87 17 chr15 61252747 61252920 -42242054 + MIR SINE MIR 31 215 -47 3 1052 189 212 0 0 chr15 61253292 61253325 -42241649 + L2b LINE L2 3329 3361 -14 3 1052 279 325 25 16 chr15 61253971 61254093 -42240881 - MIR SINE MIR -125 137 15 3 1052 348 24 0 0 chr15 61254459 61254500 -42240474 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1052 276 130 0 0 chr15 61255077 61255123 -42239851 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 3 1052 2058 251 121 34 chr15 61255124 61255750 -42239224 - Lx6 LINE L1 -31 7429 6749 3 1052 412 276 113 75 chr15 61256659 61256792 -42238182 + PB1D10 SINE Alu 12 149 0 3 1052 240 373 64 17 chr15 61256834 61257006 -42237968 - MER5A DNA MER1_type -1 188 9 3 1052 3542 72 7 0 chr15 61257344 61257802 -42237172 - L1_Mus1 LINE L1 0 6567 6107 3 1052 492 18 0 0 chr15 61257830 61257887 -42237087 + (CCA)n Simple_repeat Simple_repeat 1 57 0 3 1052 304 311 117 8 chr15 61260764 61260884 -42234090 - MIRb SINE MIR -111 157 25 3 1052 401 314 144 4 chr15 61261793 61262066 -42232908 - L2b LINE L2 -246 3141 2827 3 1052 217 336 68 62 chr15 61262731 61262877 -42232097 - MIRb SINE MIR -67 201 55 3 1052 6800 135 61 28 chr15 61264078 61265260 -42229714 + Lx2B LINE L1 5779 6999 -1 3 1052 237 159 0 0 chr15 61266498 61266542 -42228432 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 1052 489 267 0 0 chr15 61267018 61267194 -42227780 + (TA)n Simple_repeat Simple_repeat 1 176 0 3 1052 432 329 17 57 chr15 61267194 61267371 -42227603 - B3A SINE B2 -16 182 13 3 1052 332 315 81 23 chr15 61267858 61268079 -42226895 + L1M5 LINE L1 4772 5005 -1141 3 1052 337 298 87 23 chr15 61268192 61268364 -42226610 - B3A SINE B2 -13 185 3 3 1052 240 276 11 22 chr15 61268459 61268548 -42226426 + L1M5 LINE L1 5245 5332 -814 3 1052 447 304 0 0 chr15 61268605 61268717 -42226257 + PB1D7 SINE Alu 2 113 -7 3 1052 2696 231 96 27 chr15 61268725 61269498 -42225476 + Lx9 LINE L1 6818 7643 -1 3 1052 195 69 0 0 chr15 61269559 61269588 -42225386 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1052 296 282 130 16 chr15 61269680 61269864 -42225110 + L1M5 LINE L1 5590 5794 -368 3 1052 540 0 0 0 chr15 61270858 61270918 -42224056 + (TC)n Simple_repeat Simple_repeat 2 61 0 3 1052 229 372 124 0 chr15 61271667 61271796 -42223178 - B1F SINE Alu -4 145 1 3 1052 428 286 94 16 chr15 61272196 61272324 -42222650 - B1F SINE Alu 0 149 12 3 1052 278 342 76 32 chr15 61274834 61274991 -42219983 + MIRb SINE MIR 40 203 -65 3 1052 259 324 45 37 chr15 61276645 61276752 -42218222 - B1F1 SINE Alu -41 108 3 3 1052 240 209 0 0 chr15 61277082 61277125 -42217849 + MIR SINE MIR 86 128 -134 3 1052 245 309 121 52 chr15 61277157 61277273 -42217701 - B1F1 SINE Alu -17 132 9 3 1052 219 69 0 0 chr15 61277340 61277369 -42217605 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 3 1052 531 112 0 0 chr15 61278793 61278891 -42216083 + (TG)n Simple_repeat Simple_repeat 2 99 0 3 1052 192 268 52 32 chr15 61278982 61279056 -42215918 + MIRm SINE MIR 82 160 -116 3 1052 614 301 53 89 chr15 61279349 61279652 -42215322 + B4A SINE B4 1 292 0 3 1052 405 0 0 0 chr15 61279666 61279711 -42215263 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1052 405 0 0 0 chr15 61279711 61279755 -42215219 + (GA)n Simple_repeat Simple_repeat 2 46 0 3 1052 300 250 30 50 chr15 61280226 61280327 -42214647 + MER20 DNA MER1_type 5 103 -116 4 1052 649 254 46 21 chr15 61280950 61281187 -42213787 + L1M5 LINE L1 5494 5736 -388 4 1052 366 357 63 0 chr15 61283459 61283585 -42211389 - B3A SINE B2 -62 136 3 4 1052 189 0 0 0 chr15 61283648 61283669 -42211305 + (CCA)n Simple_repeat Simple_repeat 1 21 0 4 1052 189 74 0 0 chr15 61285041 61285068 -42209906 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 4 1052 396 55 0 0 chr15 61285083 61285138 -42209836 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1052 35050 61 14 1 chr15 61287220 61293387 -42201587 - L1Md_F2 LINE L1 -19 6563 311 4 1052 275 71 24 0 chr15 61293461 61293503 -42201471 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1052 571 337 4 23 chr15 61294131 61294392 -42200582 + Lx6 LINE L1 62 317 -7411 4 1052 493 196 351 5 chr15 61294388 61294596 -42200378 + Lx6 LINE L1 859 1138 -6590 4 1052 4745 224 20 32 chr15 61294585 61295785 -42199189 + Lx6 LINE L1 5533 6730 -730 4 1052 213 39 0 0 chr15 61295794 61295820 -42199154 + (ATG)n Simple_repeat Simple_repeat 2 27 0 4 1052 340 154 50 25 chr15 61296195 61296275 -42198699 + ORR1D2 LTR MaLR 289 370 0 4 1052 8167 70 14 19 chr15 61298555 61299132 -42195842 + L1_Mus1 LINE L1 4721 5292 -591 4 1052 4732 42 3 0 chr15 61299132 61299700 -42195274 + L1Md_F2 LINE L1 5997 6566 -16 4 1052 8167 86 7 9 chr15 61299700 61300975 -42193999 + L1_Mus1 LINE L1 5293 6567 0 4 1052 1237 188 149 33 chr15 61301234 61301569 -42193405 + ORR1D1 LTR MaLR 1 374 0 4 1052 997 98 35 0 chr15 61302370 61302513 -42192461 + B1_Mus1 SINE Alu 1 148 0 4 1052 774 84 0 0 chr15 61302528 61302635 -42192339 + (CAAAG)n Simple_repeat Simple_repeat 2 108 0 4 1052 349 401 65 28 chr15 61302648 61302923 -42192051 + LTR16A LTR ERVL 143 425 -26 4 1052 324 0 0 0 chr15 61302923 61302959 -42192015 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 4 1052 349 401 65 28 chr15 61302959 61302973 -42192001 + LTR16A LTR ERVL 426 442 -9 4 1052 239 127 48 60 chr15 61303829 61303913 -42191061 + (TAAA)n Simple_repeat Simple_repeat 1 83 0 4 1052 25934 132 18 3 chr15 61303952 61307087 -42187887 - L1_Mus3 LINE L1 -5 6633 3468 4 1052 2999 77 0 0 chr15 61307087 61307478 -42187496 - L1_Mus1 LINE L1 -2 6565 6175 4 1052 25934 151 12 8 chr15 61307478 61310325 -42184649 - L1_Mus3 LINE L1 -2416 3467 607 4 1052 231 217 0 0 chr15 61310900 61310946 -42184028 + (TATATG)n Simple_repeat Simple_repeat 1 46 0 4 1052 411 274 48 10 chr15 61310956 61311059 -42183915 - B4A SINE B4 -4 288 182 4 1052 639 302 99 11 chr15 61311184 61311566 -42183408 - L1MB1 LINE L1 -221 5947 5532 4 1052 428 354 96 73 chr15 61311949 61312237 -42182737 - MLT1K LTR MaLR -186 409 114 4 1052 282 29 0 0 chr15 61312237 61312272 -42182702 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1052 428 354 96 73 chr15 61312272 61312297 -42182677 - MLT1K LTR MaLR -482 113 89 4 1052 243 0 0 0 chr15 61312298 61312325 -42182649 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 1052 425 19 19 0 chr15 61312325 61312378 -42182596 + (GA)n Simple_repeat Simple_repeat 1 55 0 4 1052 450 365 99 61 chr15 61312508 61312870 -42182104 + LTR16C LTR ERVL 15 390 -99 4 1052 749 139 13 0 chr15 61312942 61313100 -42181874 + GA-rich Low_complexity Low_complexity 3 162 0 4 1052 634 388 66 86 chr15 61314179 61314588 -42180386 - MLT1H LTR MaLR -118 431 31 4 1052 252 324 35 26 chr15 61314763 61314877 -42180097 - ORR1D1 LTR MaLR -1 373 259 4 1052 213 94 0 0 chr15 61315752 61315784 -42179190 + (A)n Simple_repeat Simple_repeat 1 32 0 4 1052 23 0 0 0 chr15 61317124 61317147 -42177827 + AT_rich Low_complexity Low_complexity 1 23 0 4 1052 232 309 0 24 chr15 61317353 61317436 -42177538 + GA-rich Low_complexity Low_complexity 4 84 0 4 1052 311 344 91 8 chr15 61318175 61318307 -42176667 - MLT1A0 LTR MaLR -222 143 1 4 1052 228 365 128 12 chr15 61318309 61318481 -42176493 - L2a LINE L2 -210 3216 3025 4 1052 325 370 12 38 chr15 61318521 61318681 -42176293 - L2a LINE L2 -688 2731 2576 4 1052 383 365 27 14 chr15 61319250 61319472 -42175502 - L2a LINE L2 -1694 1725 1501 4 1052 1273 256 48 51 chr15 61319686 61320057 -42174917 + MTD LTR MaLR 2 371 -48 4 1052 223 332 158 41 chr15 61320075 61320492 -42174482 - L2a LINE L2 -2619 800 335 4 1052 4995 39 0 0 chr15 61320605 61321194 -42173780 + L1Md_T LINE L1 5994 6582 0 4 1052 23756 149 14 29 chr15 61322294 61323533 -42171441 - L1_Mus4 LINE L1 -5 6631 5388 4 1052 998 88 7 0 chr15 61323533 61323670 -42171304 + B1_Mm SINE Alu 10 147 0 4 1052 23756 149 14 29 chr15 61323670 61328481 -42166493 - L1_Mus4 LINE L1 -5 5387 554 4 1052 666 308 71 15 chr15 61328486 61328753 -42166221 + MER2 DNA MER2_type 9 290 -55 4 1052 216 135 0 0 chr15 61328757 61328794 -42166180 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1052 1003 325 10 34 chr15 61328820 61329113 -42165861 - B4 SINE B4 0 292 7 4 1052 1007 284 61 34 chr15 61331459 61331754 -42163220 + ORR1D2 LTR MaLR 1 303 -67 4 1052 335 370 52 7 chr15 61333044 61333199 -42161775 + HAL1-3A_ME LINE L1 2277 2438 -420 4 1052 276 149 0 0 chr15 61333334 61333381 -42161593 + (T)n Simple_repeat Simple_repeat 1 47 0 4 1052 21 71 0 0 chr15 61333719 61333761 -42161213 + AT_rich Low_complexity Low_complexity 1 42 0 4 1052 190 292 53 53 chr15 61334322 61334416 -42160558 + MIRb SINE MIR 116 209 -59 4 1052 281 313 20 10 chr15 61334416 61334516 -42160458 + CT-rich Low_complexity Low_complexity 3 103 0 4 1052 336 369 57 62 chr15 61336684 61337071 -42157903 + LTR79 LTR ERVL 112 496 -31 4 1052 247 188 21 0 chr15 61337417 61337465 -42157509 + GA-rich Low_complexity Low_complexity 3 51 0 4 1052 2636 65 0 0 chr15 61337483 61337822 -42157152 + L1Md_F2 LINE L1 6244 6582 0 4 1052 1196 207 152 53 chr15 61339199 61339655 -42155319 + RMER2 LTR ERV1 1 554 -13 4 1052 337 337 0 0 chr15 61339686 61339784 -42155190 + MIR SINE MIR 164 261 -1 4 1052 828 162 0 0 chr15 61340993 61341141 -42153833 + GA-rich Low_complexity Low_complexity 3 150 0 4 1052 199 260 20 0 chr15 61341528 61341578 -42153396 - L2c LINE L2 -237 3150 3100 4 1053 801 278 58 111 chr15 61342429 61342789 -42152185 - MTEa LTR MaLR -8 371 31 4 1053 360 348 152 39 chr15 61342956 61343291 -42151683 + MLT1K LTR MaLR 196 568 -27 4 1053 1120 176 10 5 chr15 61343320 61343525 -42151449 + Lx4A LINE L1 6853 7058 0 4 1053 204 143 20 39 chr15 61344744 61344795 -42150179 + T-rich Low_complexity Low_complexity 5 54 0 4 1053 438 303 20 66 chr15 61344862 61344991 -42149983 + RSINE1 SINE B4 19 141 -24 4 1053 501 97 0 0 chr15 61344991 61345063 -42149911 + (CA)n Simple_repeat Simple_repeat 2 73 0 4 1053 438 303 20 66 chr15 61345063 61345085 -42149889 + RSINE1 SINE B4 142 163 -2 4 1053 342 0 0 0 chr15 61345100 61345138 -42149836 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 4 1053 246 318 104 37 chr15 61345490 61345624 -42149350 + MIR SINE MIR 44 186 -76 4 1053 235 343 29 19 chr15 61345919 61346023 -42148951 + MLT1E1A LTR MaLR 1 105 -549 4 1053 281 373 31 8 chr15 61346020 61346147 -42148827 + MLT1E1A LTR MaLR 330 459 -221 4 1053 213 39 0 0 chr15 61346269 61346295 -42148679 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1053 181 429 48 0 chr15 61346944 61347049 -42147925 + L2b LINE L2 3253 3362 -13 4 1053 443 319 0 0 chr15 61347156 61347291 -42147683 + MLT1D LTR MaLR 367 501 -4 4 1053 378 0 0 0 chr15 61347885 61347927 -42147047 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1053 260 27 0 26 chr15 61348683 61348721 -42146253 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 4 1053 1171 76 0 0 chr15 61349454 61349598 -42145376 + B1_Mm SINE Alu 2 145 -2 4 1053 197 93 0 65 chr15 61349599 61349645 -42145329 + A-rich Low_complexity Low_complexity 6 48 0 4 1053 190 314 87 40 chr15 61349708 61349834 -42145140 + MER5A DNA MER1_type 44 175 -14 4 1053 723 364 98 53 chr15 61350343 61351007 -42143967 + LTR82B Low_complexity ERVL 119 812 -18 4 1053 400 261 20 68 chr15 61351024 61351172 -42143802 - MIRb SINE MIR -67 201 61 4 1053 483 279 98 0 chr15 61351288 61351471 -42143503 + RMER30 DNA MER1_type 2 202 0 4 1053 339 25 0 0 chr15 61351980 61352020 -42142954 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 4 1053 247 386 35 9 chr15 61354098 61354213 -42140761 + MIRc SINE MIR 1 118 -150 4 1053 597 28 0 0 chr15 61354551 61354622 -42140352 + (GA)n Simple_repeat Simple_repeat 2 72 0 4 1053 1150 55 0 48 chr15 61356546 61356735 -42138239 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 4 1053 480 70 35 0 chr15 61356987 61357073 -42137901 + (TAGA)n Simple_repeat Simple_repeat 1 89 0 4 1053 7016 97 17 7 chr15 61357144 61358362 -42136612 + L1_Mus4 LINE L1 5406 6636 0 4 1053 449 34 17 0 chr15 61360338 61360397 -42134577 + (TTTC)n Simple_repeat Simple_repeat 2 61 0 4 1053 1181 49 14 0 chr15 61360399 61360543 -42134431 - B1_Mus2 SINE Alu 0 147 2 4 1053 435 358 76 36 chr15 61361067 61361290 -42133684 - MLT1G1 LTR MaLR 0 579 348 4 1053 618 117 0 0 chr15 61361679 61361799 -42133175 + (TC)n Simple_repeat Simple_repeat 1 120 0 4 1053 213 224 0 0 chr15 61361999 61362057 -42132917 + GA-rich Low_complexity Low_complexity 3 60 0 4 1053 267 306 100 20 chr15 61362506 61362606 -42132368 - L2b LINE L2 -40 3335 3228 4 1053 227 250 0 15 chr15 61363239 61363304 -42131670 + (TGG)n Simple_repeat Simple_repeat 1 64 0 4 1053 339 85 0 0 chr15 61363441 61363488 -42131486 + (TTCTC)n Simple_repeat Simple_repeat 4 50 0 4 1053 191 133 22 0 chr15 61363481 61363526 -42131448 + T-rich Low_complexity Low_complexity 2 47 0 4 1053 205 191 0 45 chr15 61365073 61365139 -42129835 + T-rich Low_complexity Low_complexity 1 63 0 4 1053 1227 203 73 162 chr15 61365706 61366229 -42128745 + Lx9 LINE L1 7164 7639 -5 4 1053 242 321 120 62 chr15 61366728 61366987 -42127987 - B4 SINE B4 -18 274 1 4 1053 499 257 92 7 chr15 61367801 61367942 -42127032 + MLT1A1 LTR MaLR 256 408 0 4 1053 305 203 51 0 chr15 61368266 61368325 -42126649 + HAL1-3A_ME LINE L1 1950 2011 -847 4 1053 270 0 0 0 chr15 61368867 61368897 -42126077 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 1053 252 386 61 37 chr15 61369093 61369257 -42125717 + MLT1H2 LTR MaLR 57 224 -325 4 1053 436 309 29 0 chr15 61369422 61369561 -42125413 + MLT1H2 LTR MaLR 342 484 -5 4 1053 278 60 11 97 chr15 61369570 61369663 -42125311 + A-rich Low_complexity Low_complexity 1 85 0 4 1053 212 0 36 0 chr15 61370533 61370561 -42124413 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 5 1053 261 329 12 12 chr15 61371221 61371307 -42123667 + MER5A1 DNA MER1_type 80 165 -1 5 1053 1094 55 0 14 chr15 61371617 61371765 -42123209 + B1_Mm SINE Alu 2 147 0 5 1053 203 32 65 0 chr15 61371765 61371796 -42123178 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 5 1053 477 0 0 0 chr15 61372035 61372088 -42122886 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1053 201 318 21 104 chr15 61372193 61372337 -42122637 - MIRc SINE MIR -41 227 96 5 1053 1236 96 0 0 chr15 61372988 61373165 -42121809 + (GAAA)n Simple_repeat Simple_repeat 1 177 0 5 1053 306 73 0 0 chr15 61373167 61373208 -42121766 + (GGAA)n Simple_repeat Simple_repeat 4 44 0 5 1053 411 68 0 0 chr15 61373903 61373962 -42121012 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1053 249 83 0 0 chr15 61374022 61374058 -42120916 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 5 1053 339 130 0 0 chr15 61375040 61375094 -42119880 + (TCCC)n Simple_repeat Simple_repeat 3 56 0 5 1053 1233 83 0 0 chr15 61375388 61375568 -42119406 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 5 1053 523 190 23 17 chr15 61376271 61376448 -42118526 + CT-rich Low_complexity Low_complexity 3 180 0 5 1053 261 271 0 17 chr15 61376801 61376861 -42118113 + ZP3AR Satellite Satellite 24 82 -130 5 1053 681 94 10 0 chr15 61376822 61376918 -42118056 + BC1_Mm scRNA scRNA 2 98 -54 5 1053 731 187 40 60 chr15 61376962 61377161 -42117813 + B2_Mm2 SINE B2 1 195 0 5 1053 1488 6 0 0 chr15 61378000 61378172 -42116802 + L1Md_A LINE L1 6410 6581 -1 5 1053 21 0 0 0 chr15 61378172 61378193 -42116781 + AT_rich Low_complexity Low_complexity 1 21 0 5 1053 941 151 32 0 chr15 61378656 61378841 -42116133 + Lx9 LINE L1 7319 7509 -135 5 1053 540 0 0 0 chr15 61379004 61379064 -42115910 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 1053 227 333 29 0 chr15 61379090 61379192 -42115782 + MER58D DNA MER1_type 271 375 -11 5 1053 589 339 115 29 chr15 61379324 61379698 -42115276 + L2 LINE L2 2137 2542 -877 5 1053 35 0 0 0 chr15 61380393 61380428 -42114546 + AT_rich Low_complexity Low_complexity 1 35 0 5 1053 546 63 0 0 chr15 61380624 61380703 -42114271 + (GA)n Simple_repeat Simple_repeat 1 79 0 5 1053 306 98 0 0 chr15 61380944 61380995 -42113979 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1053 241 309 93 29 chr15 61381141 61381281 -42113693 + B1F SINE Alu 1 149 0 5 1053 22 103 0 0 chr15 61381333 61381411 -42113563 + AT_rich Low_complexity Low_complexity 1 78 0 5 1053 4881 34 5 13 chr15 61381746 61382343 -42112631 - L1Md_F2 LINE L1 0 6582 5991 5 1053 1601 75 0 13 chr15 61382343 61382574 -42112400 + L1Md_F2 LINE L1 5778 6005 -579 5 1053 805 268 70 0 chr15 61382846 61383089 -42111885 + Lx8 LINE L1 6894 7153 -320 5 1053 599 281 121 31 chr15 61384014 61384238 -42110736 + MLT1D LTR MaLR 258 501 -4 5 1053 189 0 0 0 chr15 61384356 61384377 -42110597 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 5 1053 325 298 134 18 chr15 61384432 61384596 -42110378 + MIR3 SINE MIR 15 197 -11 5 1053 354 272 31 39 chr15 61384560 61384690 -42110284 + L3 LINE CR1 4354 4482 -7 5 1053 333 323 75 37 chr15 61385037 61385198 -42109776 + MIR3 SINE MIR 28 194 -14 5 1053 393 22 0 0 chr15 61385400 61385446 -42109528 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 1053 721 291 120 33 chr15 61387219 61387493 -42107481 - MER2 DNA MER2_type -30 315 18 5 1053 272 306 157 32 chr15 61389458 61389674 -42105300 + L2b LINE L2 2913 3155 -220 5 1053 211 347 70 70 chr15 61389954 61390112 -42104862 - L2b LINE L2 -289 3086 2929 5 1053 186 345 172 70 chr15 61390213 61390698 -42104276 - L2b LINE L2 -671 2748 2228 5 1053 189 0 0 0 chr15 61390698 61390719 -42104255 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1053 186 345 172 70 chr15 61390719 61390778 -42104196 - L2b LINE L2 -1192 2227 2148 5 1053 1523 49 0 0 chr15 61391264 61391449 -42103525 + B2_Mm1a SINE B2 2 186 -7 5 1053 306 365 126 52 chr15 61391703 61392281 -42102693 - L2b LINE L2 -2069 1350 730 5 1053 255 293 256 5 chr15 61392305 61392504 -42102470 - MIR SINE MIR 0 262 14 5 1053 215 384 105 20 chr15 61392636 61392883 -42102091 - L2b LINE L2 -2819 600 333 5 1053 637 303 67 39 chr15 61394865 61395169 -42099805 + ORR1E LTR MaLR 7 315 -55 5 1053 7122 77 1 4 chr15 61395247 61396729 -42098245 - L1Md_F2 LINE L1 -6 6576 5100 5 1053 363 128 11 23 chr15 61396746 61396834 -42098140 + Lx3_Mus LINE L1 6923 7009 0 5 1053 400 378 62 23 chr15 61397265 61397441 -42097533 - LTR16E2 LTR ERVL -122 446 264 5 1053 37166 40 1 15 chr15 61397552 61403759 -42091215 - L1Md_A LINE L1 0 6582 282 5 1053 625 339 32 13 chr15 61405243 61405554 -42089420 - MER33 DNA MER1_type -6 318 2 5 1053 356 191 11 0 chr15 61406184 61406273 -42088701 + (TA)n Simple_repeat Simple_repeat 2 91 0 5 1053 485 246 68 34 chr15 61406482 61406629 -42088345 - MLT1D LTR MaLR -28 477 326 5 1053 712 225 62 6 chr15 61406652 61406813 -42088161 + URR1B DNA MER1_type 56 225 0 5 1053 607 282 71 22 chr15 61406914 61407182 -42087792 + Arthur1B DNA Tip100 630 910 -315 5 1053 1284 34 0 0 chr15 61407277 61407424 -42087550 + B1_Mm SINE Alu 1 147 0 5 1053 341 256 0 12 chr15 61407574 61407657 -42087317 - ID_B1 SINE B4 -1 223 142 5 1053 877 316 32 14 chr15 61407754 61408033 -42086941 - B4A SINE B4 -6 286 3 5 1053 320 328 109 0 chr15 61408173 61408292 -42086682 - ID_B1 SINE B4 -77 147 16 5 1053 501 62 0 0 chr15 61408951 61409016 -42085958 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 1053 477 0 0 0 chr15 61409441 61409494 -42085480 + (GAAA)n Simple_repeat Simple_repeat 4 56 0 5 1053 180 0 0 0 chr15 61409520 61409540 -42085434 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 5 1053 262 291 173 51 chr15 61410606 61410820 -42084154 - L1MB1 LINE L1 -265 5924 5685 5 1053 4589 109 19 5 chr15 61410823 61411932 -42083042 - L1_Mus4 LINE L1 -419 6217 5088 5 1053 2948 80 20 0 chr15 61411932 61412333 -42082641 + L1_Mus4 LINE L1 6226 6634 -2 5 1053 23 0 0 0 chr15 61412339 61412362 -42082612 + AT_rich Low_complexity Low_complexity 1 23 0 5 1053 213 39 0 0 chr15 61412479 61412505 -42082469 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 1053 183 341 86 16 chr15 61414591 61414719 -42080255 + MIRb SINE MIR 53 189 -79 5 1053 603 195 0 0 chr15 61417021 61417144 -42077830 + CT-rich Low_complexity Low_complexity 3 125 0 5 1053 312 366 127 49 chr15 61418161 61418468 -42076506 + MLT1K LTR MaLR 132 462 -133 5 1053 405 0 0 0 chr15 61418536 61418581 -42076393 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1053 23 0 0 0 chr15 61418614 61418637 -42076337 + AT_rich Low_complexity Low_complexity 1 23 0 5 1053 1064 253 125 31 chr15 61419347 61419730 -42075244 + MTD LTR MaLR 1 419 0 5 1053 188 426 0 0 chr15 61419910 61419971 -42075003 - MIRb SINE MIR -194 74 14 5 1053 2894 9 0 0 chr15 61421002 61421324 -42073650 - RLTRETN_Mm LTR ERVK 0 322 1 5 1053 399 145 0 0 chr15 61421326 61421395 -42073579 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 1053 236 342 0 12 chr15 61421400 61421480 -42073494 - B4 SINE B4 -212 80 2 5 1053 7357 72 25 0 chr15 61421523 61422603 -42072371 + L1_Mus4 LINE L1 5543 6636 0 5 1053 280 161 0 24 chr15 61422898 61422981 -42071993 + (TTATA)n Simple_repeat Simple_repeat 5 85 0 5 1053 689 302 192 42 chr15 61423429 61423859 -42071115 - MLT1F LTR MaLR -5 555 54 5 1053 216 0 0 0 chr15 61424228 61424252 -42070722 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1053 1598 189 47 64 chr15 61424634 61424995 -42069979 + ORR1C1 LTR MaLR 24 378 0 5 1053 526 329 105 0 chr15 61425349 61425577 -42069397 + Cheshire DNA MER1_type 2 253 -2167 5 1053 874 313 60 0 chr15 61426350 61426607 -42068367 + Lx8 LINE L1 7001 7270 -203 5 1053 402 21 0 0 chr15 61426607 61426654 -42068320 + (TTG)n Simple_repeat Simple_repeat 2 48 0 5 1053 874 313 60 0 chr15 61426654 61426728 -42068246 + Lx8 LINE L1 7271 7351 -122 5 1053 205 228 12 12 chr15 61427080 61427160 -42067814 + GA-rich Low_complexity Low_complexity 2 81 0 5 1053 279 175 0 0 chr15 61427407 61427464 -42067510 + GA-rich Low_complexity Low_complexity 1 57 0 5 1053 447 324 108 86 chr15 61428407 61428815 -42066159 + MLT1C LTR MaLR 47 463 -4 5 1053 259 347 51 14 chr15 61429192 61429317 -42065657 + MIR SINE MIR 112 231 -31 5 1053 641 269 23 88 chr15 61429422 61429638 -42065336 + B3 SINE B2 1 202 -14 5 1053 22 0 0 0 chr15 61429658 61429680 -42065294 + AT_rich Low_complexity Low_complexity 1 22 0 5 1053 298 322 203 11 chr15 61431739 61431921 -42063053 - MER20 DNA MER1_type -2 217 1 5 1053 628 330 129 12 chr15 61433366 61433691 -42061283 + MLT1A LTR MaLR 8 370 -4 5 1053 308 364 82 104 chr15 61434045 61434508 -42060466 - MLT1K LTR MaLR -2 593 141 5 1053 906 329 112 23 chr15 61435219 61435993 -42058981 + L2b LINE L2 1741 2583 -836 5 1053 376 382 123 19 chr15 61436064 61436618 -42058356 + L2b LINE L2 2548 3153 -222 5 1053 339 326 13 34 chr15 61436891 61437126 -42057848 - L1MA4 LINE L1 -372 5928 5699 5 1053 229 231 38 13 chr15 61437392 61437471 -42057503 + (TGGA)n Simple_repeat Simple_repeat 2 82 0 5 1053 800 323 168 91 chr15 61437511 61438021 -42056953 - MLT1H1 LTR MaLR 0 555 1 5 1053 214 336 38 57 chr15 61439233 61439391 -42055583 - MIRb SINE MIR -10 258 104 5 1053 315 237 0 0 chr15 61440747 61440903 -42054071 + (CA)n Simple_repeat Simple_repeat 1 156 0 5 1053 187 133 0 43 chr15 61441586 61441633 -42053341 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 1053 23 0 0 0 chr15 61441688 61441711 -42053263 + AT_rich Low_complexity Low_complexity 1 23 0 5 1053 544 341 54 71 chr15 61443924 61444221 -42050753 - B4A SINE B4 0 292 1 5 1053 2464 284 69 98 chr15 61444786 61445900 -42049074 + Lx5 LINE L1 5968 7049 -1 5 1053 243 0 0 0 chr15 61446898 61446925 -42048049 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1053 22 0 0 0 chr15 61447026 61447048 -42047926 + AT_rich Low_complexity Low_complexity 1 22 0 5 1053 219 36 0 0 chr15 61447955 61447983 -42046991 + (TGAG)n Simple_repeat Simple_repeat 4 31 0 6 1053 360 343 34 24 chr15 61448353 61448562 -42046412 + Tigger5 DNA MER2_type 2138 2348 -58 6 1053 851 324 46 43 chr15 61448685 61449014 -42045960 + ORR1E LTR MaLR 20 349 -10 6 1053 236 47 0 85 chr15 61449015 61449062 -42045912 + (CAAAAA)n Simple_repeat Simple_repeat 4 46 0 6 1053 1334 20 0 0 chr15 61449083 61449229 -42045745 + B1_Mm SINE Alu 2 147 0 6 1053 292 247 41 136 chr15 61450332 61450501 -42044473 + MIR SINE MIR 35 187 -75 6 1053 261 0 0 0 chr15 61451790 61451819 -42043155 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1053 513 0 0 0 chr15 61451819 61451875 -42043099 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 1053 239 366 35 35 chr15 61452222 61452338 -42042636 + MIR SINE MIR 24 139 -69 6 1053 188 292 72 45 chr15 61452687 61452798 -42042176 - MIR SINE MIR -117 145 32 6 1053 1071 236 75 36 chr15 61454000 61454307 -42040667 + ORR1E LTR MaLR 39 357 -2 6 1053 1495 278 19 16 chr15 61454591 61454961 -42040013 + MTE2b LTR MaLR 1 371 -8 6 1053 956 219 0 35 chr15 61455211 61455410 -42039564 - B3A SINE B2 -6 192 1 6 1053 942 195 98 16 chr15 61456675 61456868 -42038106 + B3 SINE B2 2 210 -6 6 1053 321 317 129 57 chr15 61457026 61457290 -42037684 + L1ME3 LINE L1 5732 6014 -148 6 1053 254 306 62 62 chr15 61457548 61457740 -42037234 + MIRb SINE MIR 62 253 -15 6 1053 202 261 0 0 chr15 61457824 61457870 -42037104 + GA-rich Low_complexity Low_complexity 2 47 0 6 1053 675 0 0 0 chr15 61457870 61457945 -42037029 + (GGAAA)n Simple_repeat Simple_repeat 5 79 0 6 1053 196 250 19 37 chr15 61458517 61458571 -42036403 + MIRc SINE MIR 2 54 -214 6 1053 3493 36 8 5 chr15 61458988 61459383 -42035591 + MTA_Mm LTR MaLR 1 396 0 6 1053 395 49 0 32 chr15 61459678 61459741 -42035233 + (CAGAGA)n Simple_repeat Simple_repeat 6 66 0 6 1053 2253 54 29 4 chr15 61459803 61460083 -42034891 - L1Md_F3 LINE L1 0 6584 6298 6 1053 22 56 0 0 chr15 61460228 61460264 -42034710 + AT_rich Low_complexity Low_complexity 1 36 0 6 1053 350 167 0 0 chr15 61460722 61460788 -42034186 - L1MA5 LINE L1 -5 6295 6230 6 1053 534 329 58 65 chr15 61461672 61461997 -42032977 + RLTR26 LTR ERVK 95 417 -225 6 1053 1017 111 52 0 chr15 61462007 61462179 -42032795 + L1_Mus4 LINE L1 6455 6635 -1 6 1053 198 0 0 0 chr15 61462856 61462878 -42032096 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1053 476 103 0 13 chr15 61463251 61463330 -42031644 - Lx2A LINE L1 -1 7007 6930 6 1053 8933 121 39 4 chr15 61463330 61465094 -42029880 - Lx2A LINE L1 -32 6976 5150 6 1053 6473 140 36 2 chr15 61465085 61466158 -42028816 + Lx2A LINE L1 4042 5151 -726 6 1053 1262 337 59 19 chr15 61466600 61467434 -42027540 + L1M2 LINE L1 2127 2993 -3150 6 1053 8799 21 1 0 chr15 61467433 61468700 -42026274 - L1Md_A LINE L1 0 6582 5315 6 1053 376 272 90 112 chr15 61468700 61468977 -42025997 + L1M2 LINE L1 2980 3250 -2893 6 1053 833 101 16 0 chr15 61469089 61469218 -42025756 + (GAAA)n Simple_repeat Simple_repeat 2 132 0 6 1053 319 247 54 126 chr15 61469725 61469836 -42025138 - PB1D10 SINE Alu -5 112 10 6 1053 236 290 158 58 chr15 61469836 61469847 -42025127 - ID_B1 SINE B4 -2 219 84 6 1053 577 283 158 9 chr15 61469847 61470068 -42024906 - MTEb LTR MaLR 0 379 126 6 1053 949 311 31 38 chr15 61470496 61470784 -42024190 + B4 SINE B4 1 286 -6 6 1053 352 328 34 8 chr15 61471806 61471923 -42023051 + LTR33 LTR ERVL 340 459 -56 6 1053 245 114 0 154 chr15 61472654 61472706 -42022268 - MT2A LTR ERVL 0 533 490 6 1053 220 184 0 0 chr15 61472709 61472747 -42022227 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1054 252 266 130 52 chr15 61474312 61474427 -42020547 + L2a LINE L2 3037 3160 -266 6 1054 180 0 0 0 chr15 61474662 61474682 -42020292 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 6 1054 659 94 0 19 chr15 61474682 61474790 -42020184 - Lx LINE L1 -1 6653 6548 6 1054 280 98 0 0 chr15 61474792 61474833 -42020141 - L1_Mus4 LINE L1 -813 5823 5783 6 1054 351 0 0 0 chr15 61474833 61474872 -42020102 + (T)n Simple_repeat Simple_repeat 1 39 0 6 1054 1339 20 0 0 chr15 61474872 61475019 -42019955 - B1_Mm SINE Alu 0 147 1 6 1054 13159 166 134 7 chr15 61475023 61475415 -42019559 - L1_Mur1 LINE L1 -90 5796 5391 6 1054 252 0 0 0 chr15 61475415 61475443 -42019531 + (ATTTG)n Simple_repeat Simple_repeat 2 29 0 6 1054 13159 166 134 7 chr15 61475443 61477722 -42017252 - L1_Mur1 LINE L1 -496 5390 2787 6 1054 318 323 90 30 chr15 61478806 61479007 -42015967 + Lx8 LINE L1 6875 7087 -386 6 1054 247 196 0 0 chr15 61479119 61479165 -42015809 + Lx8 LINE L1 7420 7465 -8 6 1054 315 0 0 0 chr15 61479770 61479805 -42015169 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1054 253 351 9 9 chr15 61479859 61479971 -42015003 + Lx8 LINE L1 7125 7236 -237 6 1054 396 365 93 29 chr15 61480125 61480642 -42014332 - L2 LINE L2 -402 3017 2468 6 1054 200 333 0 16 chr15 61481257 61481321 -42013653 + L2c LINE L2 3276 3338 -49 6 1054 213 94 0 0 chr15 61481607 61481639 -42013335 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 6 1054 225 0 0 0 chr15 61482305 61482330 -42012644 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1054 1233 68 0 0 chr15 61482344 61482491 -42012483 + B1_Mus1 SINE Alu 2 148 0 6 1054 303 28 0 0 chr15 61482491 61482527 -42012447 + (A)n Simple_repeat Simple_repeat 1 36 0 6 1054 181 349 84 0 chr15 61482956 61483039 -42011935 - MER5A DNA MER1_type -56 133 44 6 1054 292 43 0 42 chr15 61483297 61483345 -42011629 + (GGA)n Simple_repeat Simple_repeat 1 46 0 6 1054 528 16 0 0 chr15 61483377 61483438 -42011536 + (GAGAA)n Simple_repeat Simple_repeat 2 62 0 6 1054 237 333 9 18 chr15 61483502 61483615 -42011359 + MIRb SINE MIR 97 208 -60 6 1054 184 360 53 0 chr15 61483687 61483762 -42011212 + MIR3 SINE MIR 81 159 -49 6 1054 180 0 0 0 chr15 61485722 61485742 -42009232 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 6 1054 1272 51 17 0 chr15 61485952 61486129 -42008845 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 6 1054 240 316 24 18 chr15 61486477 61486560 -42008414 + L2a LINE L2 3282 3376 -50 6 1054 185 65 32 0 chr15 61486568 61486599 -42008375 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 6 1054 194 273 0 0 chr15 61487310 61487354 -42007620 - MIR SINE MIR -92 116 73 6 1054 1678 44 0 10 chr15 61487766 61487972 -42007002 - L1Md_F2 LINE L1 0 6582 6379 6 1054 239 224 51 26 chr15 61488072 61488150 -42006824 + MER20 DNA MER1_type 135 214 -5 6 1054 842 315 77 22 chr15 61488517 61488932 -42006042 + MLT1D LTR MaLR 28 465 -40 6 1054 410 350 29 43 chr15 61490283 61490492 -42004482 + MER3 DNA MER1_type 3 208 -1 6 1054 22 35 0 0 chr15 61490663 61490692 -42004282 + AT_rich Low_complexity Low_complexity 1 29 0 6 1054 26 0 0 0 chr15 61491607 61491633 -42003341 + AT_rich Low_complexity Low_complexity 1 26 0 6 1054 215 74 0 0 chr15 61491663 61491690 -42003284 + (GA)n Simple_repeat Simple_repeat 1 27 0 6 1054 707 198 12 0 chr15 61491690 61491862 -42003112 + GA-rich Low_complexity Low_complexity 4 177 0 6 1054 291 125 21 0 chr15 61491863 61491911 -42003063 + (GGGA)n Simple_repeat Simple_repeat 3 51 0 6 1054 683 116 0 9 chr15 61491911 61492024 -42002950 + (GAAA)n Simple_repeat Simple_repeat 1 112 0 6 1054 295 280 179 62 chr15 61493766 61493945 -42001029 - L2a LINE L2 0 3426 3227 6 1054 13806 18 0 0 chr15 61493996 61495552 -41999422 + L1Md_T LINE L1 4030 5585 -298 6 1054 9050 28 0 4 chr15 61495553 61496552 -41998422 + L1Md_T LINE L1 5587 6581 -1 6 1054 263 333 69 106 chr15 61496618 61497111 -41997863 - L2a LINE L2 -343 3076 2602 6 1054 4498 91 3 10 chr15 61497454 61498051 -41996923 - L1Md_F2 LINE L1 0 6582 5990 6 1054 1319 56 6 0 chr15 61498052 61498214 -41996760 + L1Md_T LINE L1 6420 6582 0 6 1054 12669 56 10 18 chr15 61498214 61500000 -41994974 - L1Md_F2 LINE L1 -578 6004 4237 6 1054 1684 57 4 0 chr15 61500002 61500229 -41994745 - L1_Mm LINE L1 -1649 4234 4007 1 1054 206 279 16 0 chr15 61500386 61500447 -41994527 - MIR3 SINE MIR -49 159 98 2 1054 805 322 96 90 chr15 61501268 61501746 -41993228 + MLT1F2 LTR MaLR 26 506 -63 3 1054 21 0 0 0 chr15 61502981 61503002 -41991972 + AT_rich Low_complexity Low_complexity 1 21 0 4 1054 562 309 61 0 chr15 61503472 61503637 -41991337 + B3 SINE B2 2 176 -40 5 1054 261 0 0 0 chr15 61503667 61503696 -41991278 + (CAAT)n Simple_repeat Simple_repeat 1 29 0 6 1054 2584 142 5 0 chr15 61504344 61504773 -41990201 + L1_Mus4 LINE L1 5253 5683 -200 7 1054 830 74 99 0 chr15 61504843 61504964 -41990010 - L1_Mus2 LINE L1 0 6566 6434 8 1054 462 70 99 0 chr15 61504964 61505035 -41989939 + L1_Mus4 LINE L1 5672 5749 -887 7 1054 1112 154 124 0 chr15 61505395 61505596 -41989378 + URR1A DNA MER1_type 1 226 0 9 1054 239 318 51 12 chr15 61505784 61505900 -41989074 + MIR SINE MIR 28 153 -109 1 1054 210 158 26 0 chr15 61507283 61507321 -41987653 - L2b LINE L2 -1 3374 3336 1 1054 1106 75 7 0 chr15 61507389 61507535 -41987439 - B1_Mus1 SINE Alu 0 148 2 1 1054 435 38 0 0 chr15 61507638 61507691 -41987283 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 1054 276 328 83 16 chr15 61507725 61507846 -41987128 + MER20 DNA MER1_type 1 129 -90 1 1054 485 104 13 0 chr15 61507958 61508035 -41986939 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 1054 213 303 47 66 chr15 61509373 61509479 -41985495 - MIRm SINE MIR -88 188 85 1 1054 2097 40 0 0 chr15 61509604 61509851 -41985123 + L1Md_F2 LINE L1 6321 6567 -15 1 1054 359 136 0 24 chr15 61509875 61509958 -41985016 + (TCTCTG)n Simple_repeat Simple_repeat 3 83 0 1 1054 396 0 0 0 chr15 61509964 61510008 -41984966 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1054 923 316 121 18 chr15 61510190 61510638 -41984336 + MER82 DNA MER2_type 153 646 -7 2 1054 283 349 71 7 chr15 61510639 61510806 -41984168 - MIRb SINE MIR -47 215 34 2 1054 206 269 149 0 chr15 61511102 61511169 -41983805 - MIRc SINE MIR -139 129 53 2 1054 211 355 72 22 chr15 61511468 61511606 -41983368 - MIRc SINE MIR -31 237 93 2 1054 836 312 14 30 chr15 61511686 61511983 -41982991 + B4 SINE B4 1 292 0 2 1054 432 0 0 0 chr15 61513040 61513088 -41981886 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1054 324 0 0 0 chr15 61513736 61513772 -41981202 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2 1054 468 270 0 0 chr15 61513861 61513976 -41980998 + Lx5 LINE L1 6246 6360 -690 2 1054 1411 311 25 35 chr15 61513980 61514497 -41980477 + Lx5 LINE L1 6491 7002 -48 2 1054 189 154 77 0 chr15 61514638 61514677 -41980297 + MER5A DNA MER1_type 71 112 -77 2 1054 440 337 64 38 chr15 61515342 61515607 -41979367 - B4A SINE B4 -18 274 3 2 1054 211 391 33 0 chr15 61516985 61517077 -41977897 - MIR SINE MIR -133 129 35 3 1054 773 276 68 68 chr15 61517878 61518244 -41976730 - ORR1D2 LTR MaLR -4 366 1 3 1054 650 287 78 0 chr15 61518285 61518543 -41976431 - Lx9 LINE L1 -1167 6477 6200 3 1054 1393 201 129 24 chr15 61518694 61519066 -41975908 + Lx6 LINE L1 7023 7433 -27 3 1054 213 341 24 0 chr15 61519086 61519168 -41975806 + B3A SINE B2 28 111 -87 3 1054 473 293 10 117 chr15 61519604 61519809 -41975165 - B3A SINE B2 -15 183 1 3 1054 1157 90 22 11 chr15 61520009 61520189 -41974785 + L1_Mus3 LINE L1 6453 6634 -4 3 1054 518 0 0 16 chr15 61520210 61520273 -41974701 + (GAAA)n Simple_repeat Simple_repeat 2 63 0 3 1054 4976 47 0 2 chr15 61520274 61520878 -41974096 + L1Md_F2 LINE L1 5967 6569 -13 3 1054 222 37 0 0 chr15 61520886 61520913 -41974061 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 1054 212 356 30 0 chr15 61520945 61521046 -41973928 + MIR3 SINE MIR 105 208 0 4 1054 185 340 37 19 chr15 61521245 61521353 -41973621 - MIRb SINE MIR -57 211 102 4 1054 588 329 120 26 chr15 61522785 61523303 -41971671 - L2a LINE L2 0 3426 2861 4 1054 183 50 48 48 chr15 61523671 61523713 -41971261 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 4 1054 753 191 0 47 chr15 61523727 61523875 -41971099 + B1_Mur4 SINE Alu 2 142 -8 4 1054 180 77 0 0 chr15 61523876 61523902 -41971072 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 4 1054 252 278 64 43 chr15 61523903 61523997 -41970977 - B1_Mus1 SINE Alu -15 133 38 4 1054 310 291 29 43 chr15 61526661 61526801 -41968173 - L1ME1 LINE L1 -186 5993 5856 4 1054 857 274 50 72 chr15 61526879 61527197 -41967777 - MTD LTR MaLR -14 405 95 4 1054 753 92 0 0 chr15 61527282 61527327 -41967647 + (TCC)n Simple_repeat Simple_repeat 1 45 0 4 1054 1251 62 6 11 chr15 61527327 61527507 -41967467 + (TTC)n Simple_repeat Simple_repeat 1 179 0 5 1054 753 92 0 0 chr15 61527507 61527570 -41967404 + (TCC)n Simple_repeat Simple_repeat 1 63 0 5 1054 1150 78 0 0 chr15 61527571 61527712 -41967262 - B1_Mm SINE Alu -6 141 1 5 1054 2495 70 36 22 chr15 61527728 61528092 -41966882 - L1_Mus3 LINE L1 -3 6635 6267 5 1054 264 188 0 0 chr15 61528176 61528245 -41966729 + CT-rich Low_complexity Low_complexity 1 69 0 5 1054 354 23 0 0 chr15 61528245 61528288 -41966686 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1054 1408 303 95 62 chr15 61528565 61529503 -41965471 - Lx8 LINE L1 -44 7429 6461 5 1054 1323 190 206 18 chr15 61529975 61530419 -41964555 + RLTR11A2 LTR ERVK 1 527 0 5 1054 1186 238 86 35 chr15 61530419 61530767 -41964207 + ORR1D2 LTR MaLR 5 370 0 5 1054 777 316 71 30 chr15 61530769 61531431 -41963543 - L1MDa LINE L1 -4459 2174 1486 5 1054 377 340 87 58 chr15 61532292 61532741 -41962233 - L1MDa LINE L1 -6090 543 82 5 1054 360 0 0 0 chr15 61533707 61533747 -41961227 + (TTG)n Simple_repeat Simple_repeat 3 42 0 6 1054 731 301 17 91 chr15 61534002 61534075 -41960899 + B4A SINE B4 1 69 -223 6 1054 1158 62 14 0 chr15 61534075 61534220 -41960754 + B1_Mm SINE Alu 1 147 0 6 1054 731 301 17 91 chr15 61534220 61534442 -41960532 + B4A SINE B4 70 274 -18 6 1054 188 346 27 45 chr15 61536711 61536823 -41958151 + MIRc SINE MIR 47 156 -112 6 1054 3106 150 106 59 chr15 61537077 61537737 -41957237 - RLTR17 LTR ERVK 0 692 2 6 1054 325 317 80 8 chr15 61538097 61538285 -41956689 - MIRc SINE MIR -30 238 36 6 1054 204 312 0 0 chr15 61538514 61538578 -41956396 + (TG)n Simple_repeat Simple_repeat 1 64 0 6 1054 660 119 0 0 chr15 61539290 61539399 -41955575 + (TG)n Simple_repeat Simple_repeat 2 110 0 6 1054 207 100 0 0 chr15 61540110 61540140 -41954834 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 6 1054 184 294 84 47 chr15 61542113 61542220 -41952754 + MIRb SINE MIR 69 179 -89 6 1054 1198 282 54 35 chr15 61542267 61542635 -41952339 + MTE2a LTR MaLR 5 379 0 7 1054 480 18 0 0 chr15 61543190 61543247 -41951727 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1054 463 272 119 40 chr15 61543266 61543442 -41951532 - B4A SINE B4 -84 208 19 7 1054 487 129 11 0 chr15 61543669 61543762 -41951212 - MusHAL1 LINE L1 -1020 1692 1599 7 1054 1237 84 0 38 chr15 61543778 61543964 -41951010 - L1_Mus1 LINE L1 0 6567 6389 7 1054 275 177 16 0 chr15 61544260 61544322 -41950652 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 7 1054 254 29 29 0 chr15 61544464 61544499 -41950475 + (TGG)n Simple_repeat Simple_repeat 3 38 0 7 1054 233 333 17 0 chr15 61550149 61550209 -41944765 + ID4_ SINE ID 9 69 -14 7 1054 191 373 0 0 chr15 61551511 61551578 -41943396 - MIRc SINE MIR -124 144 78 7 1054 1159 19 25 6 chr15 61552277 61552440 -41942534 + (TAGA)n Simple_repeat Simple_repeat 1 166 0 7 1054 898 221 102 4 chr15 61552440 61552694 -41942280 - Lx9 LINE L1 -167 7477 7199 8 1054 1417 224 65 3 chr15 61552695 61553062 -41941912 + Lx9 LINE L1 6637 7026 -618 8 1054 3534 106 144 11 chr15 61553058 61554091 -41940883 + Lx2 LINE L1 5821 6991 -6 8 1054 384 206 72 0 chr15 61554103 61554200 -41940774 + Lx9 LINE L1 7023 7126 -518 8 1054 335 307 52 9 chr15 61555920 61556035 -41938939 + MIRb SINE MIR 43 162 -106 8 1054 358 263 66 0 chr15 61556473 61556625 -41938349 + L1MC4a LINE L1 7720 7881 -1 8 1054 276 321 53 18 chr15 61556632 61556746 -41938228 + PB1D7 SINE Alu 1 118 -2 8 1054 575 27 14 0 chr15 61556756 61556829 -41938145 + (GGGA)n Simple_repeat Simple_repeat 1 74 0 8 1054 441 0 0 0 chr15 61557122 61557171 -41937803 + (TC)n Simple_repeat Simple_repeat 1 49 0 8 1054 393 22 0 0 chr15 61557202 61557248 -41937726 + (TA)n Simple_repeat Simple_repeat 2 47 0 8 1054 1233 194 65 45 chr15 61557280 61557588 -41937386 - RMER1C Other Other -9 1333 1020 8 1054 613 239 175 13 chr15 61557743 61557972 -41937002 - RMER1C Other Other -331 1011 746 8 1054 31 26 0 0 chr15 61558447 61558485 -41936489 + AT_rich Low_complexity Low_complexity 1 38 0 8 1054 939 144 19 8 chr15 61558659 61558920 -41936054 + GA-rich Low_complexity Low_complexity 1 264 0 9 1054 743 288 113 58 chr15 61559004 61559071 -41935903 + MTEa LTR MaLR 1 64 -315 9 1054 2324 82 9 3 chr15 61559071 61559391 -41935583 + L1_Mus3 LINE L1 6317 6638 0 9 1054 743 288 113 58 chr15 61559391 61559669 -41935305 + MTEa LTR MaLR 65 365 -14 9 1054 1448 190 147 21 chr15 61560107 61560146 -41934828 - MT2A LTR ERVL -3 530 459 9 1054 468 0 0 0 chr15 61560146 61560198 -41934776 + (TG)n Simple_repeat Simple_repeat 2 53 0 9 1054 1448 190 147 21 chr15 61560198 61560491 -41934483 - MT2A LTR ERVL -75 458 156 9 1054 1544 27 0 26 chr15 61560504 61560693 -41934281 + B2_Mm1t SINE B2 2 185 -8 9 1054 903 232 86 0 chr15 61560695 61560975 -41933999 - Lx9 LINE L1 -20 7624 7321 9 1054 390 309 134 0 chr15 61560975 61560994 -41933980 - MTE2b LTR MaLR -205 174 6 9 1054 708 169 92 0 chr15 61560994 61561124 -41933850 - MT2A LTR ERVL -386 147 6 9 1054 273 272 60 17 chr15 61562344 61562460 -41932514 + L1M5 LINE L1 4985 5105 -1041 9 1054 21 0 0 0 chr15 61564068 61564089 -41930885 + AT_rich Low_complexity Low_complexity 1 21 0 9 1054 333 0 0 0 chr15 61564752 61564789 -41930185 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1054 203 235 77 128 chr15 61564869 61564986 -41929988 - MIR SINE MIR -73 189 79 1 1054 686 324 19 9 chr15 61566043 61566255 -41928719 - B4A SINE B4 -73 219 6 1 1054 345 295 30 26 chr15 61566913 61567106 -41927868 + MIR SINE MIR 22 211 -51 1 1054 1018 293 108 6 chr15 61567509 61568268 -41926706 - L1MC1 LINE L1 -42 6291 5449 1 1054 180 0 0 0 chr15 61569417 61569437 -41925537 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 1054 288 0 0 0 chr15 61569437 61569468 -41925506 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 1054 480 371 64 76 chr15 61569990 61570462 -41924512 - MLT1J LTR MaLR -41 471 6 1 1054 3004 146 27 14 chr15 61570559 61571080 -41923894 - MT2B LTR ERVL -6 595 12 1 1054 1621 246 50 23 chr15 61571373 61571772 -41923202 - MTC LTR MaLR -8 413 4 1 1054 348 134 0 0 chr15 61571788 61571855 -41923119 + L1Md_F2 LINE L1 6513 6579 -3 1 1054 193 300 0 32 chr15 61572300 61572362 -41922612 + L2a LINE L2 3367 3426 0 1 1054 1162 71 0 0 chr15 61572561 61572702 -41922272 + B1_Mus1 SINE Alu 1 141 -7 1 1054 987 137 0 0 chr15 61572702 61572863 -41922111 + (GGA)n Simple_repeat Simple_repeat 2 162 0 1 1054 1340 13 6 0 chr15 61572865 61573023 -41921951 + (GAA)n Simple_repeat Simple_repeat 1 159 0 1 1054 507 328 10 39 chr15 61573079 61573282 -41921692 - MER20 DNA MER1_type -4 215 19 1 1054 1702 170 57 116 chr15 61573997 61574369 -41920605 + ORR1C1 LTR MaLR 21 370 -8 1 1054 195 42 0 0 chr15 61574999 61575023 -41919951 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1054 1129 60 12 0 chr15 61575264 61575431 -41919543 + (TC)n Simple_repeat Simple_repeat 2 170 0 1 1054 903 260 39 0 chr15 61576709 61576917 -41918057 - ID_B1 SINE B4 -2 222 7 1 1054 2043 128 97 39 chr15 61577010 61577393 -41917581 - MTB_Mm LTR MaLR 0 407 3 1 1054 1441 289 72 41 chr15 61577479 61578136 -41916838 + Lx8 LINE L1 6793 7469 -4 1 1054 540 264 51 74 chr15 61578397 61578573 -41916401 + B3A SINE B2 27 198 0 1 1054 420 314 55 61 chr15 61578754 61578893 -41916081 - Lx8 LINE L1 -7 7466 7332 1 1054 548 14 14 0 chr15 61578893 61578962 -41916012 + (TTTTG)n Simple_repeat Simple_repeat 3 72 0 1 1054 420 314 55 61 chr15 61578962 61579148 -41915826 - Lx8 LINE L1 -142 7331 7143 1 1054 2387 42 0 28 chr15 61579195 61579513 -41915461 - L1Md_F2 LINE L1 -154 6428 6120 1 1054 495 272 165 6 chr15 61579628 61579798 -41915176 - MIR SINE MIR -8 254 58 1 1054 2037 63 33 47 chr15 61579964 61580265 -41914709 - L1Md_F2 LINE L1 -1 6581 6285 1 1054 1957 172 103 3 chr15 61580362 61580730 -41914244 - MTB_Mm LTR MaLR 0 407 3 1 1054 629 82 0 10 chr15 61581626 61581724 -41913250 + (TG)n Simple_repeat Simple_repeat 2 98 0 1 1054 218 351 79 67 chr15 61581732 61581897 -41913077 - MIR SINE MIR -71 191 25 1 1054 333 271 0 77 chr15 61582613 61582717 -41912257 - L2c LINE L2 0 3387 3292 1 1054 418 304 38 5 chr15 61582802 61582987 -41911987 + L1MA4 LINE L1 5737 5927 -373 1 1054 227 330 0 54 chr15 61584227 61584339 -41910635 + L2c LINE L2 3048 3153 -234 1 1054 237 344 39 39 chr15 61584485 61584602 -41910372 + MLT1F LTR MaLR 2 118 -430 1 1054 661 254 119 0 chr15 61584602 61584779 -41910195 + ID_B1 SINE B4 2 199 -25 1 1054 222 296 0 0 chr15 61584889 61584960 -41910014 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 1054 309 296 66 15 chr15 61586050 61586187 -41908787 + MER58B DNA MER1_type 172 315 -26 1 1054 240 362 47 19 chr15 61586583 61586690 -41908284 + PB1D9 SINE Alu 5 114 -6 1 1054 21 0 0 0 chr15 61586691 61586712 -41908262 + AT_rich Low_complexity Low_complexity 1 21 0 1 1054 4275 67 5 24 chr15 61587010 61587595 -41907379 - L1Md_F2 LINE L1 0 6582 6009 1 1054 2425 122 60 19 chr15 61587729 61588023 -41906951 + Lx LINE L1 6219 6518 -136 1 1054 276 30 0 0 chr15 61588023 61588056 -41906918 + (TGGG)n Simple_repeat Simple_repeat 1 33 0 1 1054 2425 122 60 19 chr15 61588056 61588180 -41906794 + Lx LINE L1 6519 6652 -2 1 1054 456 309 0 69 chr15 61588216 61588376 -41906598 + B3A SINE B2 50 198 0 1 1054 808 227 12 0 chr15 61588394 61588566 -41906408 - Lx5 LINE L1 -5 7045 6872 1 1054 690 146 73 0 chr15 61588566 61588703 -41906271 + L1_Mur2 LINE L1 4463 4609 -1268 1 1054 12121 10 0 0 chr15 61588703 61590140 -41904834 + L1Md_A LINE L1 4150 5586 -297 1 1054 8844 14 0 0 chr15 61590140 61591136 -41903838 + L1Md_A LINE L1 5587 6582 0 1 1054 4497 143 17 45 chr15 61591169 61591577 -41903397 + L1_Mur2 LINE L1 4595 4992 -885 1 1054 3236 74 5 2 chr15 61591577 61592008 -41902966 + L1_Mus2 LINE L1 6135 6566 0 1 1054 4497 143 17 45 chr15 61592008 61592529 -41902445 + L1_Mur2 LINE L1 4993 5498 -379 1 1054 1673 230 18 15 chr15 61592531 61592929 -41902045 + Lx5 LINE L1 6638 7036 -14 1 1054 1329 68 0 0 chr15 61592929 61593106 -41901868 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 1 1054 666 0 0 0 chr15 61593108 61593182 -41901792 + (GAGAA)n Simple_repeat Simple_repeat 1 74 0 1 1054 195 42 0 0 chr15 61593182 61593206 -41901768 + (GGGA)n Simple_repeat Simple_repeat 1 24 0 1 1054 1945 62 0 4 chr15 61593270 61593529 -41901445 + L1_Mus3 LINE L1 5878 6135 -503 1 1054 1752 85 25 29 chr15 61593529 61593807 -41901167 + L1_Mus3 LINE L1 6362 6638 0 1 1054 239 297 201 24 chr15 61593809 61593978 -41900996 - MER113 DNA MER1_type -172 349 151 1 1054 196 232 302 10 chr15 61594206 61594302 -41900672 + MIRb SINE MIR 20 143 -125 1 1054 2187 75 66 0 chr15 61594356 61594690 -41900284 - L1Md_F LINE L1 -5465 1054 699 1 1054 3606 35 0 2 chr15 61594690 61595120 -41899854 + L1Md_F3 LINE L1 6156 6584 0 1 1054 657 38 0 0 chr15 61595169 61595249 -41899725 + (TCC)n Simple_repeat Simple_repeat 3 82 0 1 1054 1220 75 0 6 chr15 61595572 61595746 -41899228 + (TTTC)n Simple_repeat Simple_repeat 2 174 0 1 1054 384 103 0 0 chr15 61595747 61595805 -41899169 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 1 1054 387 0 0 0 chr15 61595812 61595855 -41899119 + (TCTA)n Simple_repeat Simple_repeat 2 44 0 1 1054 356 21 42 0 chr15 61596589 61596637 -41898337 + (TTAA)n Simple_repeat Simple_repeat 1 50 0 1 1054 433 318 58 32 chr15 61596743 61597055 -41897919 + MER33 DNA MER1_type 4 323 -1 1 1054 2688 53 6 0 chr15 61597724 61598063 -41896911 - L1Md_F2 LINE L1 -2 6580 6240 1 1054 25 51 0 0 chr15 61598119 61598158 -41896816 + AT_rich Low_complexity Low_complexity 1 39 0 1 1054 336 333 27 20 chr15 61598620 61598767 -41896207 + MIR SINE MIR 74 221 -41 1 1054 284 340 109 33 chr15 61599819 61600029 -41894945 + MIRb SINE MIR 17 242 -26 1 1054 1362 260 79 49 chr15 61600818 61601263 -41893711 - RLTR20B3 LTR ERVK -27 550 93 1 1054 1038 214 133 0 chr15 61601782 61602091 -41892883 + Lx9 LINE L1 7289 7638 -6 1 1054 180 125 0 0 chr15 61602111 61602143 -41892831 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 1 1054 830 262 18 141 chr15 61602741 61603074 -41891900 + B4 SINE B4 1 292 0 1 1054 709 253 41 21 chr15 61603160 61603354 -41891620 + B3 SINE B2 3 200 -16 1 1054 1487 240 60 3 chr15 61603376 61603710 -41891264 + MTD LTR MaLR 66 418 -1 1 131 548 329 99 50 chr15 61603764 61604087 -41890887 + MER2 DNA MER2_type 6 344 -1 1 1055 214 208 36 54 chr15 61604117 61604173 -41890801 - MIRc SINE MIR -52 216 162 1 1055 211 298 0 69 chr15 61605795 61605925 -41889049 + GA-rich Low_complexity Low_complexity 5 125 0 1 1055 1017 330 58 30 chr15 61606486 61606948 -41888026 - MLT1D LTR MaLR 0 505 31 1 1055 709 318 87 31 chr15 61607043 61607435 -41887539 + Lx8 LINE L1 6097 6510 -963 1 1055 235 341 45 45 chr15 61608815 61608947 -41886027 - MIRc SINE MIR -124 144 13 1 1055 378 115 0 0 chr15 61609684 61609745 -41885229 + (CATA)n Simple_repeat Simple_repeat 2 62 0 1 1055 359 78 0 56 chr15 61609745 61609799 -41885175 + HAL1-3A_ME LINE L1 1975 2025 -833 1 1055 419 210 17 95 chr15 61609903 61610019 -41884955 - PB1D9 SINE Alu -7 113 7 1 1055 182 360 79 26 chr15 61610114 61610228 -41884746 - MIRb SINE MIR -99 169 50 1 1055 531 45 0 0 chr15 61610241 61610307 -41884667 + (GAAA)n Simple_repeat Simple_repeat 1 66 0 1 1055 886 174 9 9 chr15 61610307 61610541 -41884433 + GA-rich Low_complexity Low_complexity 1 234 0 1 1055 212 189 0 0 chr15 61610541 61610578 -41884396 + A-rich Low_complexity Low_complexity 1 37 0 1 1055 883 321 37 11 chr15 61611015 61611393 -41883581 + Lx7 LINE L1 6922 7309 -387 1 1055 583 291 51 0 chr15 61611879 61612037 -41882937 - MLT1G LTR MaLR -85 506 341 1 1055 3015 92 2 10 chr15 61612167 61612571 -41882403 + L1_Mus4 LINE L1 6236 6636 0 1 1055 378 253 13 0 chr15 61612675 61612750 -41882224 + ID_B1 SINE B4 129 204 -20 1 1055 324 263 62 21 chr15 61612750 61612771 -41882203 + B1F1 SINE Alu 48 147 -2 1 1055 249 247 0 0 chr15 61612774 61612855 -41882119 + (CATA)n Simple_repeat Simple_repeat 3 83 0 1 1055 201 255 204 48 chr15 61613887 61613990 -41880984 + MIR3 SINE MIR 69 187 -21 1 1055 3257 281 15 77 chr15 61614776 61615391 -41879583 + Lx7 LINE L1 6326 6872 -824 1 1055 1224 75 0 0 chr15 61615391 61615538 -41879436 + B1_Mus2 SINE Alu 1 147 0 1 1055 3257 281 15 77 chr15 61615538 61616026 -41878948 + Lx7 LINE L1 6873 7361 -335 1 1055 305 230 0 0 chr15 61616065 61616139 -41878835 + GA-rich Low_complexity Low_complexity 1 74 0 1 1055 6738 94 19 5 chr15 61616261 61617192 -41877782 - Lx LINE L1 -7 6647 5704 1 1055 22 0 0 0 chr15 61617199 61617221 -41877753 + AT_rich Low_complexity Low_complexity 1 22 0 1 1055 3959 161 27 21 chr15 61617901 61618563 -41876411 + Lx4B LINE L1 6389 7054 -4 1 1055 435 38 0 0 chr15 61618573 61618626 -41876348 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 1 1055 287 243 0 39 chr15 61618638 61618715 -41876259 + Lx7 LINE L1 6929 7002 -694 2 1055 341 337 119 10 chr15 61618981 61619182 -41875792 + Cheshire DNA MER1_type 9 231 -2189 2 1055 732 321 45 11 chr15 61619535 61619803 -41875171 + Lx8 LINE L1 6831 7107 -366 2 1055 330 121 0 0 chr15 61619993 61620059 -41874915 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 1055 573 86 0 0 chr15 61623241 61623334 -41871640 + (TG)n Simple_repeat Simple_repeat 2 94 0 2 1055 252 0 0 0 chr15 61623612 61623640 -41871334 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 1055 310 297 161 59 chr15 61624405 61624641 -41870333 + MLT1J2 LTR MaLR 6 265 -183 2 1055 195 167 0 0 chr15 61626370 61626412 -41868562 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1055 252 59 0 0 chr15 61626428 61626462 -41868512 + (A)n Simple_repeat Simple_repeat 1 34 0 2 1055 192 312 40 30 chr15 61626628 61626727 -41868247 + MIR SINE MIR 83 182 -80 2 1055 291 256 90 0 chr15 61627134 61627147 -41867827 - ID_B1 SINE B4 -132 92 8 2 1055 336 215 15 0 chr15 61627147 61627212 -41867762 - ID2 SINE ID -10 73 8 2 1055 2945 65 22 0 chr15 61627817 61628173 -41866801 + L1_Mus1 LINE L1 6204 6567 0 2 1055 313 269 0 0 chr15 61628246 61628313 -41866661 + ID2 SINE ID 1 67 -16 2 1055 2268 91 7 3 chr15 61628655 61628952 -41866022 + L1_Mus3 LINE L1 6336 6633 -5 2 1055 305 219 23 0 chr15 61629100 61629179 -41865795 + PB1D9 SINE Alu 37 127 0 2 1055 213 286 29 48 chr15 61629232 61629335 -41865639 + MIRb SINE MIR 73 173 -95 2 1055 264 214 252 10 chr15 61630132 61630231 -41864743 - PB1 SINE Alu 0 127 5 2 1055 419 309 35 26 chr15 61630719 61630832 -41864142 + RSINE1 SINE B4 3 116 -49 2 1055 231 125 0 0 chr15 61630862 61630902 -41864072 + (CATA)n Simple_repeat Simple_repeat 4 43 0 2 1055 231 271 0 28 chr15 61631200 61631272 -41863702 + (CATA)n Simple_repeat Simple_repeat 1 70 0 2 1055 572 264 60 56 chr15 61631473 61631742 -41863232 - L3 LINE CR1 -102 4387 4118 2 1055 277 259 34 48 chr15 61632466 61632612 -41862362 - Lx8 LINE L1 -22 7451 7308 2 1055 244 276 45 109 chr15 61632776 61632886 -41862088 + MIRc SINE MIR 103 205 -63 2 1055 247 271 11 105 chr15 61633881 61633976 -41860998 + MT2B2 LTR ERVL 152 237 -347 2 1055 394 289 9 19 chr15 61633901 61634007 -41860967 + PB1D10 SINE Alu 6 110 -7 2 1055 211 260 0 20 chr15 61634044 61634142 -41860832 + A-rich Low_complexity Low_complexity 4 99 0 2 1055 596 168 8 0 chr15 61634148 61634273 -41860701 + GA-rich Low_complexity Low_complexity 4 129 0 2 1055 557 229 97 22 chr15 61634282 61634416 -41860558 + B1_Mur2 SINE Alu 6 149 0 2 1055 237 346 75 38 chr15 61635509 61635695 -41859279 + L2 LINE L2 2172 2364 -1055 2 1055 541 295 102 8 chr15 61635791 61636027 -41858947 + MIR SINE MIR 5 262 0 2 1055 1044 160 0 0 chr15 61636486 61636706 -41858268 + CT-rich Low_complexity Low_complexity 1 220 0 2 1055 212 0 0 35 chr15 61636708 61636737 -41858237 + (TTCTC)n Simple_repeat Simple_repeat 5 32 0 2 1055 28 0 0 0 chr15 61636739 61636767 -41858207 + AT_rich Low_complexity Low_complexity 1 28 0 2 1055 463 362 24 6 chr15 61637350 61637514 -41857460 + MER20 DNA MER1_type 7 173 -46 2 1055 926 110 14 0 chr15 61637940 61638086 -41856888 - URR1A DNA MER1_type 0 226 79 2 1055 2669 208 27 23 chr15 61638109 61638627 -41856347 + Lx5 LINE L1 6523 7042 -8 2 1055 208 53 0 50 chr15 61638627 61638667 -41856307 + (GAAAA)n Simple_repeat Simple_repeat 4 41 0 2 1055 573 290 130 5 chr15 61639012 61639227 -41855747 - L1MC1 LINE L1 -13 6320 6079 2 1055 338 196 0 252 chr15 61639237 61639360 -41855614 + MT2B LTR ERVL 149 240 -361 2 1055 574 113 19 157 chr15 61639259 61639403 -41855571 + B1_Mus2 SINE Alu 1 272 -39 2 1055 371 245 0 0 chr15 61639412 61639506 -41855468 - L1MD LINE L1 -2223 5772 5679 2 1055 6001 73 59 0 chr15 61640284 61640756 -41854218 - Lx3_Mus LINE L1 -581 6428 5910 2 1055 288 0 0 0 chr15 61640756 61640788 -41854186 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2 1055 6001 84 58 2 chr15 61640788 61641128 -41853846 - Lx3_Mus LINE L1 -531 5913 5588 2 1055 4819 65 2 0 chr15 61641128 61641694 -41853280 + Lx3_Mus LINE L1 6443 7009 0 2 1055 831 288 32 32 chr15 61641694 61641721 -41853253 - Lx3_Mus LINE L1 -847 5597 5574 2 1055 529 169 0 31 chr15 61641729 61641827 -41853147 - RMER6D LTR ERVK -515 205 111 2 1055 1844 203 131 73 chr15 61641820 61641971 -41853003 + RMER6C LTR ERVK 44 175 -515 2 1055 1239 75 0 0 chr15 61641971 61642118 -41852856 + B1_Mus2 SINE Alu 1 147 0 2 1055 1844 203 131 73 chr15 61642118 61642578 -41852396 + RMER6C LTR ERVK 176 690 0 2 1055 31 26 0 0 chr15 61642655 61642693 -41852281 + AT_rich Low_complexity Low_complexity 1 38 0 2 1055 2488 194 65 50 chr15 61643225 61643799 -41851175 - RLTR31A_Mm LTR ERVK -2 582 1 2 1055 802 292 13 40 chr15 61644758 61644986 -41849988 + ID_B1 SINE B4 1 222 -2 2 1055 308 148 0 16 chr15 61644993 61645055 -41849919 + A-rich Low_complexity Low_complexity 5 65 0 2 1055 428 220 53 35 chr15 61645157 61645327 -41849647 + (CATTC)n Satellite Satellite 4 176 0 2 1055 428 220 53 35 chr15 61645353 61645523 -41849451 + (CATTC)n Satellite Satellite 4 176 0 2 1055 325 262 20 52 chr15 61645450 61645603 -41849371 + (CACTC)n Simple_repeat Simple_repeat 3 150 0 2 1055 402 21 0 0 chr15 61645808 61645855 -41849119 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1055 231 114 0 0 chr15 61647117 61647152 -41847822 + (TTA)n Simple_repeat Simple_repeat 2 36 0 2 1055 1195 284 43 10 chr15 61647203 61647502 -41847472 + RMER1C Other Other 424 732 -610 2 1055 379 356 87 36 chr15 61647504 61647781 -41847193 + MLT1C LTR MaLR 151 441 -26 2 1055 180 338 127 0 chr15 61649482 61649553 -41845421 - MIRb SINE MIR -23 245 166 2 1055 190 286 20 0 chr15 61649595 61649644 -41845330 - MIRc SINE MIR -159 109 60 2 1055 1372 91 10 46 chr15 61650214 61650409 -41844565 + B2_Mm2 SINE B2 3 190 -5 2 1055 1137 128 0 0 chr15 61650420 61650600 -41844374 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 2 1055 280 344 76 23 chr15 61651006 61651137 -41843837 - MIRb SINE MIR -33 235 98 2 1055 219 69 0 0 chr15 61651685 61651714 -41843260 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2 1055 5985 90 2 0 chr15 61651781 61652603 -41842371 - MusHAL1 LINE L1 -626 2086 1263 2 1055 3605 130 3 37 chr15 61652593 61653258 -41841716 - L1VL2 LINE L1 -5755 580 9 2 1055 962 17 0 8 chr15 61653733 61653850 -41841124 + (GAA)n Simple_repeat Simple_repeat 2 117 0 2 1055 2239 186 70 5 chr15 61653934 61654350 -41840624 - RMER1B Other Other -2 1064 622 2 1055 2029 223 209 14 chr15 61654331 61654964 -41840010 + Lx7 LINE L1 6941 7696 0 2 1055 383 309 139 41 chr15 61655018 61655312 -41839662 + L3 LINE CR1 3968 4290 -199 2 1055 494 368 132 46 chr15 61655899 61656596 -41838378 - L2 LINE L2 -342 3077 2321 2 1055 315 0 0 0 chr15 61658012 61658047 -41836927 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1055 183 204 0 0 chr15 61658884 61658938 -41836036 + A-rich Low_complexity Low_complexity 1 54 0 2 1055 553 327 0 26 chr15 61659216 61659370 -41835604 + RSINE1 SINE B4 3 152 -13 2 1055 768 181 79 0 chr15 61659465 61659592 -41835382 + B1_Mur2 SINE Alu 5 141 -8 2 1055 585 76 0 0 chr15 61659596 61659675 -41835299 + (GAA)n Simple_repeat Simple_repeat 2 80 0 2 1055 2768 157 45 112 chr15 61659694 61659909 -41835065 + L1_Mur2 LINE L1 1636 1849 -4028 2 1055 504 0 0 0 chr15 61659909 61659965 -41835009 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1055 2768 157 45 112 chr15 61659965 61660474 -41834500 + L1_Mur2 LINE L1 1850 2311 -3566 2 1055 4474 181 15 17 chr15 61660474 61661198 -41833776 + Lx5 LINE L1 6315 7037 -13 2 1055 342 0 0 0 chr15 61661198 61661236 -41833738 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2 1055 904 303 89 19 chr15 61661262 61661493 -41833481 + B4 SINE B4 16 269 -23 2 1055 288 0 0 0 chr15 61661493 61661525 -41833449 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1055 904 303 89 19 chr15 61661525 61661552 -41833422 + B4 SINE B4 270 291 -1 2 1055 376 379 57 43 chr15 61661689 61662096 -41832878 - MLT1G LTR MaLR -71 524 23 2 1055 30 45 0 0 chr15 61662461 61662505 -41832469 + AT_rich Low_complexity Low_complexity 1 44 0 2 1055 967 60 29 29 chr15 61662754 61662891 -41832083 + L1_Mus1 LINE L1 6431 6567 0 2 1055 38291 8 0 2 chr15 61663059 61670058 -41824916 - L1Md_A LINE L1 0 6582 1 2 1055 436 337 35 0 chr15 61670216 61670388 -41824586 + MLT1D LTR MaLR 310 487 -18 2 1055 261 242 145 43 chr15 61670787 61670925 -41824049 + L1M5 LINE L1 5528 5679 -515 2 1055 220 309 25 0 chr15 61672687 61672768 -41822206 - MIRm SINE MIR -124 152 70 2 1055 183 268 99 40 chr15 61673107 61673208 -41821766 + MIRb SINE MIR 117 223 -45 2 1055 229 274 0 19 chr15 61673312 61673364 -41821610 + ID4_ SINE ID 16 66 -17 2 1055 533 116 0 21 chr15 61673496 61673593 -41821381 + (TGG)n Simple_repeat Simple_repeat 1 95 0 2 1055 234 0 0 0 chr15 61673590 61673616 -41821358 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1055 330 254 42 14 chr15 61673780 61673852 -41821122 + ID4_ SINE ID 1 74 -9 2 1055 194 348 142 5 chr15 61673935 61674146 -41820828 - L2 LINE L2 -357 3062 2823 2 1055 239 304 29 0 chr15 61674775 61674844 -41820130 - MIR SINE MIR -57 151 81 2 1055 356 284 0 0 chr15 61674981 61675055 -41819919 + ID SINE ID 2 75 -149 2 1055 240 314 0 41 chr15 61674994 61675067 -41819907 + BC1_Mm scRNA scRNA 15 84 -68 2 1055 12651 84 35 43 chr15 61676056 61678051 -41816923 + L1VL2 LINE L1 11 2007 -1608 2 1055 926 91 106 0 chr15 61678051 61678183 -41816791 - B1_Mm SINE Alu 0 147 2 2 1055 12651 84 68 25 chr15 61678183 61679145 -41815829 + L1VL2 LINE L1 2008 2985 -630 2 1055 21 0 0 0 chr15 61679228 61679249 -41815725 + AT_rich Low_complexity Low_complexity 1 21 0 3 1055 3090 73 18 5 chr15 61679282 61679669 -41815305 - L1_Mus1 LINE L1 0 6567 6176 3 1055 3937 69 17 2 chr15 61679669 61680430 -41814544 + L1_Mus1 LINE L1 5349 6161 -406 3 1055 185 119 24 0 chr15 61680496 61680538 -41814436 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 3 1055 1331 83 0 62 chr15 61680855 61681048 -41813926 - L1_Mus2 LINE L1 0 6566 6386 3 1055 545 84 71 12 chr15 61681048 61681132 -41813842 + L1VL2 LINE L1 705 793 -5542 3 1055 2781 78 48 5 chr15 61681361 61681491 -41813483 + L1_Mus1 LINE L1 6248 6376 -262 3 1055 300 27 0 0 chr15 61681491 61681528 -41813446 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 1055 2781 78 48 5 chr15 61681528 61681772 -41813202 + L1_Mus1 LINE L1 6377 6637 -1 3 1055 231 154 136 15 chr15 61682305 61682371 -41812603 + L1M4 LINE L1 5734 5807 -367 3 1055 522 299 101 44 chr15 61682474 61682792 -41812182 + MER44A DNA MER2_type 4 339 0 3 1055 261 0 0 0 chr15 61683224 61683253 -41811721 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1055 275 186 28 28 chr15 61683253 61683325 -41811649 + T-rich Low_complexity Low_complexity 1 72 0 3 1055 208 347 0 0 chr15 61683334 61683409 -41811565 + GA-rich Low_complexity Low_complexity 2 76 0 3 1055 350 186 0 0 chr15 61683704 61683763 -41811211 - Lx8 LINE L1 -1072 6401 6343 3 1055 1701 297 46 31 chr15 61683758 61684342 -41810632 + Lx9 LINE L1 6535 7127 -517 3 1055 1076 295 29 20 chr15 61684370 61684713 -41810261 - Lx6 LINE L1 -26 7434 7089 3 1055 870 305 28 23 chr15 61684688 61685043 -41809931 + Lx9 LINE L1 6969 7449 -195 3 1055 498 17 0 0 chr15 61685043 61685102 -41809872 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 1055 315 0 0 0 chr15 61685102 61685136 -41809838 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1055 562 326 91 34 chr15 61685136 61685252 -41809722 + Lx9 LINE L1 7336 7467 -6 3 1055 326 23 0 23 chr15 61685538 61685582 -41809392 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 1055 666 213 39 0 chr15 61685584 61685711 -41809263 - B1_Mus1 SINE Alu -13 135 4 3 1055 1016 63 0 0 chr15 61686414 61686541 -41808433 + B1_Mm SINE Alu 21 147 0 3 1055 265 273 112 52 chr15 61686554 61686670 -41808304 + MIRc SINE MIR 61 183 -85 3 1055 620 317 122 17 chr15 61686749 61686957 -41808017 + Tigger9b DNA MER2_type 8 239 -385 3 1055 405 0 0 0 chr15 61686957 61687002 -41807972 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1055 620 317 122 17 chr15 61687002 61687088 -41807886 + Tigger9b DNA MER2_type 240 332 -292 3 1055 220 167 48 0 chr15 61687362 61687404 -41807570 + (CGTG)n Simple_repeat Simple_repeat 3 46 0 3 1055 845 275 0 47 chr15 61687404 61687595 -41807379 - B3A SINE B2 -16 182 1 3 1055 310 284 12 0 chr15 61687595 61687676 -41807298 + Tigger9b DNA MER2_type 508 589 -35 3 1055 4931 66 15 0 chr15 61688429 61689016 -41805958 + L1_Mus2 LINE L1 5967 6562 -4 3 1055 10032 74 0 21 chr15 61689021 61689491 -41805483 + Lx3_Mus LINE L1 5450 5907 -1102 3 1055 823 67 8 8 chr15 61689491 61689611 -41805363 + (GAA)n Simple_repeat Simple_repeat 2 121 0 3 1055 10032 92 3 46 chr15 61689611 61690776 -41804198 + Lx3_Mus LINE L1 5908 7008 -1 3 1055 788 296 0 5 chr15 61691039 61691226 -41803748 + Lx8 LINE L1 7048 7233 -240 3 1055 231 354 10 20 chr15 61691226 61691327 -41803647 + RMER15 LTR ERVL 371 470 -105 3 1055 27 29 0 0 chr15 61691424 61691458 -41803516 + AT_rich Low_complexity Low_complexity 1 34 0 3 1055 411 311 95 24 chr15 61692825 61692993 -41801981 + MIR SINE MIR 17 196 -66 3 1055 180 219 0 0 chr15 61693844 61693876 -41801098 + MIR SINE MIR 77 108 -154 3 1055 24 0 0 0 chr15 61694209 61694233 -41800741 + AT_rich Low_complexity Low_complexity 1 24 0 3 1055 505 262 0 0 chr15 61695067 61695170 -41799804 + Lx9 LINE L1 7175 7277 -367 3 1055 448 176 59 0 chr15 61695196 61695298 -41799676 + Lx9 LINE L1 7529 7636 -8 3 1055 304 268 65 86 chr15 61695908 61696047 -41798927 - MER5A DNA MER1_type -2 187 52 3 1055 255 295 79 15 chr15 61696264 61696418 -41798556 - MLT1J LTR MaLR -296 216 17 3 1055 185 344 0 0 chr15 61696433 61696497 -41798477 - MIRm SINE MIR -126 150 87 3 1055 230 345 86 40 chr15 61697198 61697349 -41797625 + MIRb SINE MIR 42 199 -69 3 1055 318 77 61 15 chr15 61697637 61697703 -41797271 + C-rich Low_complexity Low_complexity 1 69 0 3 1055 582 330 51 14 chr15 61698421 61698716 -41796258 - Lx9 LINE L1 -189 7455 7150 3 1055 455 295 148 0 chr15 61698767 61698984 -41795990 + L1MA7 LINE L1 4840 5088 -1055 3 1055 902 246 67 16 chr15 61699012 61699181 -41795793 + B3 SINE B2 4 184 -32 3 1055 336 24 0 0 chr15 61699181 61699222 -41795752 + (TAGA)n Simple_repeat Simple_repeat 3 43 0 3 1055 902 246 67 16 chr15 61699222 61699246 -41795728 + B3 SINE B2 185 207 -9 3 1055 1484 165 34 54 chr15 61699275 61699411 -41795563 - Lx9 LINE L1 -2 7642 7513 3 1055 5495 50 0 5 chr15 61699411 61700049 -41794925 - L1Md_F2 LINE L1 -12 6570 5936 3 1055 1484 165 34 54 chr15 61700049 61700265 -41794709 - Lx9 LINE L1 -132 7512 7298 3 1055 488 301 33 0 chr15 61700312 61700554 -41794420 + L1MA7 LINE L1 5156 5413 -878 3 1055 457 127 0 0 chr15 61700736 61700799 -41794175 + ORR1D1 LTR MaLR 1 63 -311 3 1055 762 43 0 0 chr15 61700822 61700916 -41794058 + (TC)n Simple_repeat Simple_repeat 1 94 0 3 1055 442 248 10 5 chr15 61700922 61701044 -41793930 + ORR1D1 LTR MaLR 188 327 -57 3 1055 228 57 74 19 chr15 61701045 61701099 -41793875 + (TTTTG)n Simple_repeat Simple_repeat 4 60 0 3 1055 1240 61 7 0 chr15 61701099 61701246 -41793728 - B1_Mus1 SINE Alu 0 148 1 3 1055 284 194 45 0 chr15 61701246 61701313 -41793661 + ORR1D1 LTR MaLR 315 384 0 3 1055 588 186 72 8 chr15 61701313 61701435 -41793539 + MTEa LTR MaLR 250 379 0 3 1055 422 251 67 17 chr15 61701446 61701624 -41793350 + L1MA7 LINE L1 5417 5603 -688 3 1055 746 287 28 0 chr15 61701626 61701807 -41793167 + B3A SINE B2 12 197 -1 3 1055 989 267 57 101 chr15 61701811 61702014 -41792960 + L1MA7 LINE L1 5587 5786 -505 3 1055 231 36 0 0 chr15 61702014 61702042 -41792932 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 1055 989 267 60 101 chr15 61702042 61702397 -41792577 + L1MA7 LINE L1 5787 6130 -170 3 1055 629 179 8 31 chr15 61702447 61702574 -41792400 - ORR1C1 LTR MaLR 0 378 255 3 1055 204 40 0 0 chr15 61703212 61703237 -41791737 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1055 571 284 15 0 chr15 61705195 61705329 -41789645 + B1_Mur1 SINE Alu 2 137 -12 3 1055 499 29 14 14 chr15 61705886 61705956 -41789018 + (TC)n Simple_repeat Simple_repeat 1 70 0 3 1055 4148 74 0 8 chr15 61706164 61706669 -41788305 - L1Md_F2 LINE L1 -11 6571 6071 3 1055 432 51 0 0 chr15 61706744 61706803 -41788171 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 3 1055 748 299 160 72 chr15 61707044 61707396 -41787578 - MTD LTR MaLR 0 379 17 3 1055 300 360 54 9 chr15 61707818 61707930 -41787044 - PB1D10 SINE Alu 0 117 1 3 1055 539 244 16 48 chr15 61708010 61708135 -41786839 + RSINE1 SINE B4 4 124 -41 3 1055 441 0 0 0 chr15 61708135 61708184 -41786790 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1055 476 213 128 45 chr15 61708229 61708362 -41786612 + B1F SINE Alu 5 148 -1 3 1055 531 304 125 14 chr15 61708426 61708706 -41786268 + L1MC1 LINE L1 5657 5967 -366 3 1055 294 125 0 0 chr15 61708965 61709013 -41785961 - L1VL4 LINE L1 -5482 820 773 3 1055 7477 26 0 0 chr15 61710003 61710814 -41784160 - L1Md_T LINE L1 -1 6581 5771 3 1055 989 172 52 17 chr15 61710814 61711045 -41783929 - Lx9 LINE L1 -30 7614 7376 3 1055 526 256 71 38 chr15 61711041 61711252 -41783722 + L1MC1 LINE L1 6017 6234 -110 3 1055 937 63 0 8 chr15 61711289 61711417 -41783557 + L1Md_F2 LINE L1 6435 6561 -21 3 1055 321 26 0 0 chr15 61711417 61711455 -41783519 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 1055 296 95 0 0 chr15 61711463 61711505 -41783469 + L1MC2 LINE L1 6276 6317 -27 3 1055 388 382 90 33 chr15 61712368 61712436 -41782538 - MT2A LTR ERVL -29 504 426 3 1055 4282 142 45 12 chr15 61712436 61713106 -41781868 + RLTR17 LTR ERVK 1 692 0 3 1055 388 382 90 33 chr15 61713106 61713459 -41781515 - MT2A LTR ERVL -108 425 59 3 1055 5464 75 41 20 chr15 61713763 61714001 -41780973 - L1VL4 LINE L1 -1862 1697 1469 3 1055 3174 44 3 14 chr15 61714001 61714372 -41780602 + L1Md_F2 LINE L1 6216 6582 0 3 1055 5464 86 48 11 chr15 61714372 61715592 -41779382 - L1VL4 LINE L1 -2091 1468 195 3 1055 221 358 121 24 chr15 61715597 61715763 -41779211 - MIRc SINE MIR -56 212 31 3 1055 245 310 77 24 chr15 61717013 61717136 -41777838 + MIRm SINE MIR 27 161 -101 3 1055 1043 314 42 6 chr15 61717418 61717754 -41777220 - ORR1E LTR MaLR -11 348 1 3 1055 2668 212 173 14 chr15 61718236 61718872 -41776102 + RMER19A LTR ERVK 1 737 0 3 1055 348 306 87 35 chr15 61718890 61719005 -41775969 - MTEa LTR MaLR -10 369 249 3 1055 1221 245 71 74 chr15 61719166 61719202 -41775772 + MTEb LTR MaLR 2 30 -349 3 1055 1622 213 67 25 chr15 61719202 61719558 -41775416 - ORR1D1 LTR MaLR -3 371 1 3 1055 1221 245 71 74 chr15 61719558 61719874 -41775100 + MTEb LTR MaLR 31 353 -26 3 1055 531 383 45 62 chr15 61721298 61721652 -41773322 + ORR1E LTR MaLR 1 348 -11 3 1055 634 308 98 14 chr15 61721670 61721947 -41773027 + MER2 DNA MER2_type 38 337 -8 3 1055 275 326 73 39 chr15 61722050 61722254 -41772720 + L1MD2 LINE L1 6024 6234 -125 3 1055 389 271 78 5 chr15 61723953 61724119 -41770855 - L1MA8 LINE L1 -3 6309 6128 3 1055 180 0 0 0 chr15 61724406 61724426 -41770548 + (CA)n Simple_repeat Simple_repeat 2 21 0 3 1055 597 313 15 25 chr15 61724507 61724710 -41770264 - B3 SINE B2 -13 203 3 3 1055 1015 251 55 15 chr15 61724746 61725017 -41769957 - Lx4B LINE L1 -4 7054 6773 3 1055 4842 169 54 9 chr15 61725055 61725943 -41769031 + Lx4B LINE L1 5789 6716 -342 3 1055 224 105 26 0 chr15 61725977 61726015 -41768959 + B1_Mus1 SINE Alu 18 56 -92 3 1055 259 98 19 38 chr15 61726015 61726068 -41768906 + GA-rich Low_complexity Low_complexity 2 53 0 3 1055 1219 247 54 37 chr15 61726068 61726497 -41768477 - L1MA8 LINE L1 -209 6082 5647 3 1055 900 231 58 14 chr15 61726591 61726868 -41768106 - L1MA8 LINE L1 -675 5616 5328 3 1055 317 229 24 0 chr15 61726971 61727062 -41767912 - L1MA8 LINE L1 -1731 4412 4321 3 1055 200 86 29 0 chr15 61727074 61727109 -41767865 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1055 509 294 77 11 chr15 61727187 61727369 -41767605 - B4A SINE B4 -60 232 39 3 1055 1440 207 120 26 chr15 61727822 61727969 -41767005 + ORR1D1 LTR MaLR 1 177 -197 3 1055 642 26 0 0 chr15 61727969 61728045 -41766929 + (TC)n Simple_repeat Simple_repeat 2 77 0 3 1055 1440 207 120 26 chr15 61728045 61728239 -41766735 + ORR1D1 LTR MaLR 178 374 0 3 1055 211 188 30 30 chr15 61728909 61728975 -41765999 + MIRc SINE MIR 201 266 -2 3 1055 4878 71 3 6 chr15 61729529 61730166 -41764808 + L1_Mus4 LINE L1 6002 6636 0 3 1055 335 284 174 31 chr15 61731120 61731218 -41763756 + PB1D10 SINE Alu 14 125 -2 3 1055 192 304 51 0 chr15 61731553 61731632 -41763342 + MIR SINE MIR 99 181 -81 3 1055 186 322 154 17 chr15 61732029 61732146 -41762828 + MIRc SINE MIR 37 169 -99 4 1055 735 128 141 2 chr15 61732758 61732991 -41761983 - Lx3A LINE L1 -24 6957 6669 4 1055 314 277 27 34 chr15 61733339 61733485 -41761489 + GA-rich Low_complexity Low_complexity 3 147 0 4 1055 315 352 41 0 chr15 61733726 61733848 -41761126 - ORR1E LTR MaLR -227 132 6 4 1055 329 287 151 22 chr15 61733857 61734042 -41760932 + L1M4 LINE L1 5614 5822 -352 4 1055 3209 97 7 15 chr15 61734091 61734553 -41760421 + Lx2A LINE L1 6546 7003 -5 4 1055 1894 82 2 1 chr15 61734559 61734819 -41760155 + L1Md_T LINE L1 5353 5615 -574 4 131 8674 30 0 0 chr15 61734819 61735814 -41759160 + L1Md_T LINE L1 5587 6581 -1 4 1056 6381 57 1 9 chr15 61735809 61736611 -41758363 + L1Md_F2 LINE L1 5783 6578 -4 4 1056 479 230 54 42 chr15 61736636 61736804 -41758170 + L1MA10 LINE L1 6163 6332 -2 4 1056 740 230 181 36 chr15 61737199 61737386 -41757588 + B4 SINE B4 1 223 -69 4 1056 429 20 0 0 chr15 61737386 61737436 -41757538 + (TAA)n Simple_repeat Simple_repeat 2 51 0 4 1056 740 230 181 36 chr15 61737436 61737496 -41757478 + B4 SINE B4 224 284 -8 4 1056 439 165 0 32 chr15 61737507 61737632 -41757342 + (TAAA)n Simple_repeat Simple_repeat 2 122 0 4 1056 609 306 97 42 chr15 61738201 61738511 -41756463 - MLT2D LTR ERVL -84 330 4 4 1056 590 240 66 13 chr15 61738704 61738856 -41756118 + RSINE1 SINE B4 6 165 0 4 1056 194 315 11 22 chr15 61739717 61739808 -41755166 - MIR SINE MIR -117 145 56 4 1056 26 30 0 0 chr15 61740005 61740038 -41754936 + AT_rich Low_complexity Low_complexity 1 33 0 4 1056 3226 246 91 10 chr15 61740099 61740904 -41754070 + Lx8 LINE L1 6375 7244 -229 4 1056 584 287 49 40 chr15 61740917 61741142 -41753832 + MER2 DNA MER2_type 118 344 -1 4 1056 426 39 0 0 chr15 61741624 61741676 -41753298 + (TTA)n Simple_repeat Simple_repeat 2 53 0 4 1056 303 237 122 10 chr15 61741743 61741841 -41753133 + MIRc SINE MIR 68 179 -97 4 1056 195 100 0 0 chr15 61742044 61742074 -41752900 + (ATG)n Simple_repeat Simple_repeat 1 30 0 4 1056 287 291 13 0 chr15 61742841 61742920 -41752054 + ID2 SINE ID 4 83 0 4 1056 310 285 135 41 chr15 61743178 61743445 -41751529 + MLT1B LTR MaLR 81 384 -83 4 1056 2326 84 3 12 chr15 61744561 61744885 -41750089 + L1Md_A LINE L1 6261 6581 -1 4 1056 9041 9 0 3 chr15 61746024 61747052 -41747922 + L1Md_T LINE L1 5589 6582 0 4 1056 2385 174 29 14 chr15 61747484 61747899 -41747075 + MTC LTR MaLR 1 421 0 4 1056 773 221 87 13 chr15 61747909 61747973 -41747001 + MTB_Mm LTR MaLR 176 250 -171 4 1056 3527 30 0 128 chr15 61747973 61748473 -41746501 - RLTR10C LTR ERVK 0 436 1 4 1056 773 221 87 13 chr15 61748473 61748637 -41746337 + MTB_Mm LTR MaLR 251 421 0 4 1056 4260 176 78 67 chr15 61748636 61749694 -41745280 + MTB_Mm-int LTR MaLR 2 1071 -187 4 1056 393 68 0 0 chr15 61749778 61749837 -41745137 - MusHAL1 LINE L1 -632 2080 2022 4 1056 966 137 29 0 chr15 61749853 61749992 -41744982 + B1_Mus1 SINE Alu 2 144 -4 4 1056 579 116 209 7 chr15 61750008 61750156 -41744818 + MTB_Mm-int LTR MaLR 1080 1257 -1 4 1056 2080 196 10 17 chr15 61750157 61750567 -41744407 + MTB_Mm LTR MaLR 1 407 0 4 1056 318 86 0 0 chr15 61750979 61751037 -41743937 - L1Md_F2 LINE L1 -1 6581 6524 4 1056 240 0 0 0 chr15 61751037 61751064 -41743910 + L1_Mus1 LINE L1 6400 6426 -141 4 1056 3980 199 22 32 chr15 61751491 61752290 -41742684 - Lx5 LINE L1 0 7050 6260 4 1056 3437 165 55 23 chr15 61752305 61752957 -41742017 + Lx5 LINE L1 5587 6259 -791 4 1056 480 111 0 0 chr15 61753027 61753117 -41741857 + (CA)n Simple_repeat Simple_repeat 2 91 0 4 1056 387 312 154 42 chr15 61753204 61753606 -41741368 + L2a LINE L2 2953 3399 -27 4 1056 214 276 0 54 chr15 61753682 61753774 -41741200 + GA-rich Low_complexity Low_complexity 2 88 0 4 1056 350 298 21 0 chr15 61754074 61754167 -41740807 + B4A SINE B4 1 95 -197 4 1056 1094 95 0 6 chr15 61754167 61754326 -41740648 + B2_Mm2 SINE B2 1 158 -37 4 1056 207 0 0 0 chr15 61754327 61754350 -41740624 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 4 1056 341 298 32 11 chr15 61754441 61754536 -41740438 + B4 SINE B4 190 286 -6 4 1056 216 304 0 28 chr15 61754541 61754612 -41740362 + (CATA)n Simple_repeat Simple_repeat 2 70 0 4 1056 194 293 38 57 chr15 61754796 61754901 -41740073 + MIR SINE MIR 21 123 -139 4 1056 243 45 43 22 chr15 61755671 61755717 -41739257 + (CAAAA)n Simple_repeat Simple_repeat 4 50 0 4 1056 635 127 45 9 chr15 61755995 61756106 -41738868 + B1_Mus1 SINE Alu 24 138 -10 4 1056 193 316 101 10 chr15 61756908 61757007 -41737967 - MIR3 SINE MIR -46 162 55 4 1056 1046 94 0 0 chr15 61757417 61757566 -41737408 + L1_Mus1 LINE L1 6419 6567 0 4 1056 1173 168 34 0 chr15 61757746 61757955 -41737019 - URR1A DNA MER1_type 0 226 11 4 1056 183 80 0 0 chr15 61758149 61758174 -41736800 + (CACAC)n Simple_repeat Simple_repeat 1 25 0 4 1056 588 269 8 10 chr15 61758451 61758601 -41736373 - ID_B1 SINE B4 -47 245 94 4 1056 210 179 103 2 chr15 61760041 61760108 -41734866 - MIRc SINE MIR -124 152 81 4 1056 237 299 80 30 chr15 61760418 61760518 -41734456 + MIRb SINE MIR 53 157 -111 4 1056 655 154 117 107 chr15 61760609 61760805 -41734169 + Lx9 LINE L1 7315 7512 -132 4 1056 318 232 78 35 chr15 61760947 61761013 -41733961 - ID_B1 SINE B4 -46 178 109 4 1056 219 36 0 0 chr15 61761013 61761041 -41733933 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1056 318 232 78 35 chr15 61761041 61761090 -41733884 - ID_B1 SINE B4 -116 108 58 4 1056 1269 162 107 163 chr15 61761242 61761634 -41733340 + ORR1D1 LTR MaLR 1 370 -4 4 1056 910 256 28 5 chr15 61763430 61763646 -41731328 + ID_B1 SINE B4 2 222 -2 4 1056 23 68 0 0 chr15 61763782 61763826 -41731148 + AT_rich Low_complexity Low_complexity 1 44 0 4 1056 577 338 98 28 chr15 61764025 61764351 -41730623 + ORR1E LTR MaLR 1 349 -10 4 1056 258 32 0 0 chr15 61764959 61764990 -41729984 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 4 1056 4507 285 22 26 chr15 61764992 61765065 -41729909 - Lx7 LINE L1 -307 7389 7317 4 1056 252 0 0 0 chr15 61765065 61765093 -41729881 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1056 4507 285 22 26 chr15 61765093 61766308 -41728666 - Lx7 LINE L1 -380 7316 6106 4 1056 263 222 139 0 chr15 61766308 61766380 -41728594 + 5S rRNA rRNA 3 84 -37 4 1056 420 20 0 0 chr15 61766422 61766471 -41728503 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1056 2317 276 46 74 chr15 61766489 61767286 -41727688 - Lx8 LINE L1 -63 7410 6636 4 1056 302 104 0 43 chr15 61767380 61767450 -41727524 + (A)n Simple_repeat Simple_repeat 1 67 0 4 1056 559 283 7 7 chr15 61767458 61767611 -41727363 + RSINE1 SINE B4 3 155 -10 4 1056 536 130 0 11 chr15 61767616 61767709 -41727265 + (GGGA)n Simple_repeat Simple_repeat 4 95 0 4 1056 618 109 0 0 chr15 61767719 61767811 -41727163 + (TAGA)n Simple_repeat Simple_repeat 2 93 0 4 1056 1803 279 66 37 chr15 61767815 61768253 -41726721 - Lx8 LINE L1 -844 6629 6185 4 1056 602 259 29 78 chr15 61768253 61768458 -41726516 - B3A SINE B2 -2 196 2 4 1056 1803 279 66 37 chr15 61768458 61768582 -41726392 - Lx8 LINE L1 -1289 6184 6051 4 1056 203 141 92 15 chr15 61768728 61768793 -41726181 + (TCTA)n Simple_repeat Simple_repeat 2 71 0 4 1056 207 0 0 0 chr15 61769889 61769912 -41725062 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 4 1056 259 224 17 0 chr15 61769918 61769976 -41724998 - L2b LINE L2 -12 3363 3305 4 1056 311 131 336 19 chr15 61770277 61770384 -41724590 - B2_Mm2 SINE B2 -8 187 47 4 1056 1185 120 29 0 chr15 61770397 61770572 -41724402 - B2_Mm2 SINE B2 -14 181 2 4 1056 247 290 92 46 chr15 61771294 61771446 -41723528 + MER102c DNA MER1_type 72 230 -101 4 1056 667 281 69 16 chr15 61771696 61771866 -41723108 + B3A SINE B2 1 181 -17 4 1056 180 0 0 0 chr15 61771866 61771886 -41723088 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1056 667 281 69 16 chr15 61771886 61771903 -41723071 + B3A SINE B2 182 198 0 4 1056 3489 30 0 0 chr15 61771935 61772337 -41722637 + L1Md_F2 LINE L1 6167 6568 -14 4 1056 216 0 0 0 chr15 61772342 61772366 -41722608 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 4 1056 647 90 10 0 chr15 61772780 61772880 -41722094 + (TC)n Simple_repeat Simple_repeat 1 101 0 4 1056 249 316 56 55 chr15 61772972 61773133 -41721841 - MLT1E LTR MaLR -11 643 489 4 1056 266 329 47 41 chr15 61773143 61773314 -41721660 + MIRb SINE MIR 97 268 0 4 1056 188 345 70 17 chr15 61774455 61774570 -41720404 + MIRb SINE MIR 97 217 -51 4 1056 413 324 15 0 chr15 61775083 61775219 -41719755 + RMER15 LTR ERVL 422 559 -16 4 1056 522 0 0 0 chr15 61775304 61775362 -41719612 + (GGA)n Simple_repeat Simple_repeat 1 58 0 4 1056 273 57 0 0 chr15 61775403 61775438 -41719536 + (GGAA)n Simple_repeat Simple_repeat 3 37 0 4 1056 432 55 0 0 chr15 61775444 61775499 -41719475 + (GGAAA)n Simple_repeat Simple_repeat 2 56 0 4 1056 762 43 0 0 chr15 61775572 61775666 -41719308 + (TCC)n Simple_repeat Simple_repeat 2 95 0 4 1056 351 0 0 0 chr15 61776547 61776586 -41718388 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 4 1056 512 156 41 12 chr15 61776837 61777015 -41717959 + MYSERV-int LTR ERVK 1154 1266 -1060 4 1056 1267 41 0 0 chr15 61777017 61777164 -41717810 + B1_Mus2 SINE Alu 1 147 0 4 1056 192 143 0 0 chr15 61777164 61777206 -41717768 + (A)n Simple_repeat Simple_repeat 1 42 0 4 1056 4683 74 20 0 chr15 61777239 61777849 -41717125 - L1_Mus1 LINE L1 0 6567 5946 4 1056 3933 202 46 84 chr15 61777855 61778609 -41716365 + MYSERV-int LTR ERVK 5522 6306 -244 4 1056 1525 53 21 11 chr15 61778609 61778799 -41716175 + B2_Mm1t SINE B2 1 192 -1 4 1056 3933 202 46 84 chr15 61778799 61778829 -41716145 + MYSERV-int LTR ERVK 6307 6329 -221 4 1056 1285 14 7 0 chr15 61778829 61778975 -41715999 + B1_Mm SINE Alu 1 147 0 4 1056 3933 202 46 84 chr15 61778975 61779257 -41715717 + MYSERV-int LTR ERVK 6330 6548 -2 4 1056 2315 178 28 56 chr15 61779261 61779801 -41715173 + RLTR11A2 LTR ERVK 3 527 0 4 1056 465 19 0 0 chr15 61779921 61779975 -41714999 + (GA)n Simple_repeat Simple_repeat 2 55 0 4 1056 248 290 20 70 chr15 61780100 61780200 -41714774 + MER5A1 DNA MER1_type 18 112 -54 4 1056 227 298 0 0 chr15 61780337 61780394 -41714580 + MIRc SINE MIR 83 139 -129 4 1056 240 318 67 22 chr15 61780868 61781003 -41713971 + B1F2 SINE Alu 8 148 -1 4 1056 21 0 0 0 chr15 61781723 61781744 -41713230 + AT_rich Low_complexity Low_complexity 1 21 0 4 1056 369 0 0 0 chr15 61782161 61782202 -41712772 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1056 2730 81 6 0 chr15 61782320 61782679 -41712295 - L1_Mus1 LINE L1 -2 6565 6205 5 1056 231 36 0 0 chr15 61782782 61782810 -41712164 + (CTG)n Simple_repeat Simple_repeat 2 29 0 5 1056 668 210 3 3 chr15 61782856 61783192 -41711782 + (TG)n Simple_repeat Simple_repeat 1 336 0 5 1056 2808 166 67 56 chr15 61783300 61783869 -41711105 + RMER15 LTR ERVL 1 575 0 5 1056 706 296 48 26 chr15 61783889 61784118 -41710856 - B4 SINE B4 -22 270 37 5 1056 1361 89 16 0 chr15 61784376 61784567 -41710407 - B2_Mm2 SINE B2 -1 194 1 5 1056 638 25 12 0 chr15 61784613 61784693 -41710281 + (TTCC)n Simple_repeat Simple_repeat 3 83 0 5 1056 357 273 27 18 chr15 61784697 61784809 -41710165 - PB1D9 SINE Alu -7 113 1 5 1056 733 278 77 35 chr15 61784946 61785256 -41709718 - MLT1F LTR MaLR -98 450 128 5 1056 691 173 0 0 chr15 61785209 61785319 -41709655 + B1_Mur2 SINE Alu 6 115 -34 5 1056 306 217 0 148 chr15 61785624 61785666 -41709308 + B4A SINE B4 1 38 -254 5 1056 1610 32 0 16 chr15 61785666 61785859 -41709115 + B2_Mm1a SINE B2 3 192 -1 5 1056 306 230 19 141 chr15 61785859 61785904 -41709070 + B4A SINE B4 39 71 -221 5 1056 3935 110 73 0 chr15 61785904 61786506 -41708468 + Lx4A LINE L1 6413 7058 0 5 1056 283 296 122 100 chr15 61786506 61786687 -41708287 + B4 SINE B4 72 276 -16 5 1056 498 60 0 0 chr15 61787006 61787073 -41707901 - ORR1A2 LTR MaLR -4 323 257 5 1056 1197 100 0 16 chr15 61787108 61787262 -41707712 + B2_Mm2 SINE B2 2 154 -41 5 1056 3879 45 13 0 chr15 61787262 61787731 -41707243 + MT2C_Mm LTR ERVL 1 475 0 5 1056 1197 100 0 16 chr15 61787731 61787759 -41707215 + B2_Mm2 SINE B2 155 181 -14 5 1056 340 132 51 0 chr15 61787773 61787835 -41707139 - B2_Mm2 SINE B2 -83 115 46 5 1056 1203 114 29 0 chr15 61787885 61788060 -41706914 - B2_Mm2 SINE B2 -14 181 2 5 1056 1988 78 0 0 chr15 61788060 61788330 -41706644 - ORR1A2 LTR MaLR -57 270 1 5 1056 1578 29 37 42 chr15 61788711 61788926 -41706048 + L1Md_F3 LINE L1 6371 6584 0 5 1056 399 41 0 0 chr15 61788963 61789012 -41705962 + (TAA)n Simple_repeat Simple_repeat 1 49 0 5 1056 486 75 0 0 chr15 61789295 61789362 -41705612 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 1056 3402 109 16 2 chr15 61789484 61789999 -41704975 - L1_Mur2 LINE L1 -1837 4040 3519 5 1056 910 104 0 0 chr15 61789999 61790133 -41704841 - B1_Mus1 SINE Alu -14 134 1 5 1056 442 179 22 152 chr15 61790020 61790158 -41704816 - MT2B LTR ERVL -337 264 145 5 1056 2602 72 0 12 chr15 61790159 61790498 -41704476 + Lx LINE L1 5785 6119 -535 5 1056 337 253 0 0 chr15 61791931 61792022 -41702952 + GA-rich Low_complexity Low_complexity 2 92 0 5 1056 87 64 0 0 chr15 61792572 61792729 -41702245 + AT_rich Low_complexity Low_complexity 1 157 0 5 1056 374 311 50 29 chr15 61792945 61793084 -41701890 - RSINE1 SINE B4 -22 143 2 5 1056 329 255 40 2 chr15 61795269 61795360 -41699614 - B1F SINE Alu -9 108 16 5 1056 911 266 122 108 chr15 61795364 61795762 -41699212 - MTD LTR MaLR 0 379 4 5 1056 364 339 45 30 chr15 61795806 61795940 -41699034 + RSINE1 SINE B4 8 143 -22 5 1056 396 0 0 0 chr15 61795940 61795984 -41698990 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1056 507 45 0 0 chr15 61795984 61796050 -41698924 - B2_Mm2 SINE B2 -117 78 13 5 1056 1954 127 9 6 chr15 61796042 61796080 -41698894 + ORR1A1 LTR MaLR 21 57 -289 5 1056 2965 55 0 21 chr15 61796080 61796469 -41698505 + L1Md_F2 LINE L1 6202 6582 0 5 1056 1954 127 9 6 chr15 61796469 61796747 -41698227 + ORR1A1 LTR MaLR 58 336 -10 5 1056 425 333 0 0 chr15 61797611 61797761 -41697213 + (TG)n Simple_repeat Simple_repeat 1 150 0 5 1056 346 219 35 6 chr15 61797761 61797931 -41697043 + (TATG)n Simple_repeat Simple_repeat 4 178 0 5 1056 265 233 0 0 chr15 61797936 61797996 -41696978 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 1056 747 214 0 7 chr15 61798230 61798371 -41696603 + B1_Mus2 SINE Alu 1 140 -7 5 1056 210 150 0 0 chr15 61798706 61798746 -41696228 + (TTTCC)n Simple_repeat Simple_repeat 3 42 0 5 1056 4118 39 0 12 chr15 61798975 61799474 -41695500 + L1Md_F2 LINE L1 6087 6579 -3 5 1056 321 86 368 19 chr15 61800033 61800139 -41694835 - B2_Mm2 SINE B2 -6 189 47 5 1056 1143 134 35 0 chr15 61800208 61800380 -41694594 - B2_Mm1t SINE B2 -14 179 2 5 1056 503 118 0 12 chr15 61800410 61800496 -41694478 + (TG)n Simple_repeat Simple_repeat 2 86 0 5 1056 335 208 240 0 chr15 61800664 61800760 -41694214 - PB1D9 SINE Alu -1 119 1 5 1056 190 269 58 0 chr15 61800945 61800997 -41693977 - MIRb SINE MIR -7 261 207 5 1056 857 191 7 0 chr15 61801377 61801524 -41693450 + B1_Mus1 SINE Alu 1 148 0 5 1056 279 143 0 0 chr15 61801529 61801571 -41693403 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 5 1056 633 128 0 0 chr15 61801581 61801683 -41693291 + (GA)n Simple_repeat Simple_repeat 1 102 0 5 1056 573 15 0 0 chr15 61801685 61801751 -41693223 + (GGAA)n Simple_repeat Simple_repeat 1 66 0 5 1056 792 32 0 0 chr15 61801758 61801853 -41693121 + (GAGAA)n Simple_repeat Simple_repeat 5 99 0 5 1056 635 224 7 14 chr15 61802114 61802259 -41692715 - B1_Mur2 SINE Alu 0 149 6 5 1056 278 302 71 14 chr15 61803147 61803288 -41691686 + L1M5 LINE L1 5581 5729 -395 5 1056 365 289 146 14 chr15 61803989 61804133 -41690841 + RSINE1 SINE B4 2 164 -1 5 1056 243 275 0 70 chr15 61804190 61804249 -41690725 + Lx7 LINE L1 7263 7318 -378 5 1056 3232 51 2 5 chr15 61804249 61804645 -41690329 + MTA_Mm LTR MaLR 1 395 -1 5 1056 243 275 0 70 chr15 61804645 61804671 -41690303 + Lx7 LINE L1 7319 7342 -354 5 1056 986 66 79 21 chr15 61804682 61804822 -41690152 - B1_Mus1 SINE Alu 0 148 1 5 1056 899 179 45 30 chr15 61804893 61805094 -41689880 + Lx7 LINE L1 7371 7574 -122 5 1056 498 75 0 0 chr15 61805094 61805161 -41689813 + (TTTC)n Simple_repeat Simple_repeat 3 69 0 5 1056 694 185 88 7 chr15 61805163 61805299 -41689675 - B1_Mus1 SINE Alu -1 147 1 5 1056 362 148 307 46 chr15 61805299 61805413 -41689561 + Lx7 LINE L1 7388 7456 -4 5 1056 349 221 29 0 chr15 61805499 61805567 -41689407 + B1_Mus1 SINE Alu 1 70 -78 5 1056 788 213 0 0 chr15 61806299 61806440 -41688534 + B1_Mur3 SINE Alu 3 143 -6 5 1056 225 0 0 0 chr15 61806520 61806545 -41688429 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 5 1056 28 0 0 0 chr15 61806545 61806573 -41688401 + AT_rich Low_complexity Low_complexity 1 28 0 5 1056 785 238 83 0 chr15 61808223 61808416 -41686558 - B3 SINE B2 -4 212 4 5 1056 544 65 0 0 chr15 61808455 61808532 -41686442 + B2_Mm2 SINE B2 3 79 -116 5 1056 1399 99 16 0 chr15 61808546 61808737 -41686237 + B2_Mm2 SINE B2 1 194 -1 5 1056 595 100 0 29 chr15 61808737 61808840 -41686134 + (GGGA)n Simple_repeat Simple_repeat 2 101 0 5 1056 388 208 19 86 chr15 61808928 61809033 -41685941 + MT2B LTR ERVL 160 257 -344 5 1056 963 88 0 0 chr15 61808941 61809078 -41685896 + B1_Mus1 SINE Alu 12 148 0 5 1056 183 162 0 0 chr15 61809082 61809119 -41685855 + A-rich Low_complexity Low_complexity 1 37 0 5 1056 2392 110 0 3 chr15 61809226 61809553 -41685421 + ORR1A4 LTR MaLR 4 329 0 5 1056 223 326 0 34 chr15 61809721 61809810 -41685164 + RSINE1 SINE B4 78 163 -2 5 1056 402 308 7 27 chr15 61809987 61810137 -41684837 - MER20 DNA MER1_type -72 147 1 5 1056 210 167 0 23 chr15 61810453 61810496 -41684478 + GA-rich Low_complexity Low_complexity 1 42 0 5 1056 603 318 71 101 chr15 61811513 61811891 -41683083 - MTEa LTR MaLR -12 367 1 5 1056 561 188 117 0 chr15 61811891 61812019 -41682955 + B1_Mus1 SINE Alu 6 148 0 5 1056 204 135 0 0 chr15 61812022 61812059 -41682915 + (GAAAA)n Simple_repeat Simple_repeat 3 39 0 5 1056 365 277 0 41 chr15 61812644 61812742 -41682232 + PB1D10 SINE Alu 16 109 -8 5 1056 267 324 0 0 chr15 61812748 61812819 -41682155 + ID4 SINE ID 2 72 -11 5 1056 345 93 0 0 chr15 61812831 61812885 -41682089 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 1056 23 33 0 0 chr15 61813068 61813098 -41681876 + AT_rich Low_complexity Low_complexity 1 30 0 5 1056 21 0 0 0 chr15 61813647 61813668 -41681306 + AT_rich Low_complexity Low_complexity 1 21 0 5 1056 530 157 0 0 chr15 61813673 61813756 -41681218 + B1_Mus1 SINE Alu 2 84 -64 5 1056 200 143 0 23 chr15 61813829 61813872 -41681102 + CT-rich Low_complexity Low_complexity 2 43 0 5 1056 286 176 0 14 chr15 61813872 61813941 -41681033 - L1_Mur3 LINE L1 -629 5251 5184 5 1056 217 250 0 18 chr15 61814019 61814076 -41680898 - PB1D9 SINE Alu -59 61 6 5 1056 289 329 39 86 chr15 61814229 61814462 -41680512 + ID_B1 SINE B4 1 222 -2 5 1056 354 45 0 0 chr15 61814468 61814512 -41680462 + (TAA)n Simple_repeat Simple_repeat 2 45 0 5 1056 279 79 0 0 chr15 61815278 61815316 -41679658 + (T)n Simple_repeat Simple_repeat 1 38 0 5 1056 202 318 16 0 chr15 61816817 61816880 -41678094 + GA-rich Low_complexity Low_complexity 4 67 0 5 1056 423 0 0 0 chr15 61818893 61818940 -41676034 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1056 189 107 0 0 chr15 61819991 61820019 -41674955 + (C)n Simple_repeat Simple_repeat 1 28 0 5 1056 207 0 0 0 chr15 61820490 61820513 -41674461 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1056 23 101 0 0 chr15 61821826 61821905 -41673069 + AT_rich Low_complexity Low_complexity 1 79 0 5 1056 270 323 0 0 chr15 61824528 61824590 -41670384 + ID4 SINE ID 2 63 -20 5 1056 255 337 12 12 chr15 61824590 61824612 -41670362 + ID SINE ID 2 85 -139 5 1056 198 0 0 0 chr15 61824653 61824675 -41670299 + (TGG)n Simple_repeat Simple_repeat 1 22 0 5 1056 221 221 2 0 chr15 61825192 61825249 -41669725 - MIRb SINE MIR -32 236 173 5 1056 35 41 0 0 chr15 61825289 61825338 -41669636 + AT_rich Low_complexity Low_complexity 1 49 0 5 1056 323 296 1 62 chr15 61825808 61825933 -41669041 - PB1D10 SINE Alu -1 116 1 6 1056 2761 76 52 3 chr15 61826663 61826678 -41668296 + MTB LTR MaLR 1 15 -385 6 1056 522 0 0 0 chr15 61826678 61826736 -41668238 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 1056 2761 76 52 3 chr15 61826736 61827101 -41667873 + MTB LTR MaLR 16 398 -2 6 1056 625 228 0 23 chr15 61827377 61827507 -41667467 - B1_Mur1 SINE Alu -11 138 12 6 1056 269 243 26 120 chr15 61827411 61827528 -41667446 - MT2B LTR ERVL -341 260 155 6 1056 1044 103 0 0 chr15 61827539 61827685 -41667289 - B1_Mus1 SINE Alu 0 148 3 6 1056 276 211 141 0 chr15 61827708 61827796 -41667178 + PB1D9 SINE Alu 1 99 -21 6 1056 237 83 0 0 chr15 61827798 61827834 -41667140 + (TAA)n Simple_repeat Simple_repeat 1 36 0 6 1056 318 148 0 0 chr15 61828108 61828162 -41666812 + (GGGA)n Simple_repeat Simple_repeat 3 56 0 6 1056 1249 54 0 0 chr15 61828234 61828381 -41666593 - B1_Mm SINE Alu 0 147 1 6 1056 228 67 0 0 chr15 61828730 61828760 -41666214 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 6 1056 1166 82 0 0 chr15 61828761 61828919 -41666055 - B2_Mm2 SINE B2 -37 158 1 6 1056 653 71 134 0 chr15 61829233 61829345 -41665629 - L1Md_F2 LINE L1 -1 6581 6455 6 1056 247 292 27 54 chr15 61829565 61829677 -41665297 + B1_Mm SINE Alu 5 113 -34 6 1056 563 229 155 21 chr15 61829741 61829928 -41665046 + B3 SINE B2 5 216 0 6 1056 217 302 0 0 chr15 61829953 61830016 -41664958 + ID4 SINE ID 8 70 -13 6 1056 632 162 117 0 chr15 61830050 61830161 -41664813 + B3 SINE B2 1 124 -92 6 1056 327 203 0 0 chr15 61831692 61831766 -41663208 + CT-rich Low_complexity Low_complexity 2 75 0 6 1056 463 295 60 115 chr15 61831766 61831984 -41662990 - ID_B1 SINE B4 -16 208 3 6 1056 1078 97 7 0 chr15 61833262 61833407 -41661567 + B1_Mus2 SINE Alu 2 147 0 6 1056 429 212 0 29 chr15 61833421 61833557 -41661417 + GA-rich Low_complexity Low_complexity 2 133 0 6 1056 282 256 65 22 chr15 61833866 61833958 -41661016 - ID_B1 SINE B4 -39 185 90 6 1056 468 0 0 0 chr15 61833969 61834021 -41660953 + (TC)n Simple_repeat Simple_repeat 2 53 0 6 1056 1092 78 7 0 chr15 61834024 61834165 -41660809 - B1_Mus1 SINE Alu -6 142 1 6 1056 420 20 0 0 chr15 61834397 61834446 -41660528 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1056 343 239 43 21 chr15 61835007 61835101 -41659873 - PB1D7 SINE Alu -7 113 18 6 1056 219 309 11 69 chr15 61835704 61835791 -41659183 + MER5A DNA MER1_type 74 155 -34 6 1056 221 386 26 7 chr15 61835881 61836035 -41658939 - MIR SINE MIR -21 241 85 6 1056 499 243 9 9 chr15 61836882 61836990 -41657984 + PB1 SINE Alu 2 109 -18 6 1056 423 0 0 0 chr15 61837043 61837090 -41657884 + (TAG)n Simple_repeat Simple_repeat 2 48 0 6 1056 306 0 0 0 chr15 61837141 61837175 -41657799 + (TA)n Simple_repeat Simple_repeat 1 34 0 6 1056 264 59 0 0 chr15 61837185 61837219 -41657755 + (TAG)n Simple_repeat Simple_repeat 3 36 0 6 1056 276 329 0 12 chr15 61837319 61837399 -41657575 - ID_B1 SINE B4 -55 169 91 6 1056 407 338 22 22 chr15 61837427 61837566 -41657408 - ID_B1 SINE B4 -10 214 76 6 1056 379 102 45 11 chr15 61837759 61837848 -41657126 + (TAGA)n Simple_repeat Simple_repeat 4 95 0 6 1056 391 257 36 18 chr15 61837878 61837989 -41656985 + MLT1I LTR MaLR 25 137 -274 6 1056 189 0 0 0 chr15 61838381 61838402 -41656572 + (TTCA)n Simple_repeat Simple_repeat 2 22 0 6 1056 416 315 20 7 chr15 61838424 61838574 -41656400 - RSINE1 SINE B4 -11 154 3 6 1056 1556 185 116 14 chr15 61838579 61838924 -41656050 + ORR1C2 LTR MaLR 5 384 0 6 1056 881 273 61 29 chr15 61839148 61839427 -41655547 + Lx8 LINE L1 6802 7089 -384 6 1056 510 277 36 0 chr15 61839743 61839880 -41655094 - MER45A DNA Tip100 -1 177 36 6 1056 1182 57 0 0 chr15 61840452 61840593 -41654381 - B1_Mus2 SINE Alu -6 141 1 6 1056 210 37 0 0 chr15 61840615 61840642 -41654332 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1056 611 296 19 6 chr15 61840643 61840803 -41654171 - RSINE1 SINE B4 -1 164 3 6 1056 265 271 0 14 chr15 61840899 61841045 -41653929 + (TG)n Simple_repeat Simple_repeat 1 144 0 6 1056 413 233 0 0 chr15 61841736 61841822 -41653152 + PB1D10 SINE Alu 3 88 -29 6 1056 237 98 0 0 chr15 61841882 61841923 -41653051 + (T)n Simple_repeat Simple_repeat 1 41 0 6 1056 2715 240 83 40 chr15 61841953 61842852 -41652122 + Lx9 LINE L1 6692 7629 -15 6 1056 1122 260 78 26 chr15 61843333 61843681 -41651293 + MTE2b LTR MaLR 1 366 -13 6 1056 1973 281 88 22 chr15 61843912 61843967 -41651007 + Lx7 LINE L1 6635 6700 -996 6 1056 658 214 38 8 chr15 61843967 61844099 -41650875 + B1_Mur3 SINE Alu 1 136 -13 6 1056 1973 281 88 22 chr15 61844099 61844766 -41650208 + Lx7 LINE L1 6701 7405 -291 6 1056 238 179 110 49 chr15 61844774 61844856 -41650118 + Lx8 LINE L1 7353 7439 -34 6 1056 678 123 76 15 chr15 61844890 61845022 -41649952 - B1_Mur3 SINE Alu -1 148 9 6 1056 273 225 32 53 chr15 61845130 61845224 -41649750 + RSINE1 SINE B4 39 130 -35 6 1056 1025 65 42 35 chr15 61845261 61845405 -41649569 + B1_Mus2 SINE Alu 3 147 0 6 1056 767 267 19 14 chr15 61845494 61845707 -41649267 + B3 SINE B2 3 216 0 6 1056 23 33 0 0 chr15 61845707 61845737 -41649237 + AT_rich Low_complexity Low_complexity 1 30 0 6 1056 208 233 27 0 chr15 61846098 61846171 -41648803 + CT-rich Low_complexity Low_complexity 4 78 0 6 1056 457 262 8 16 chr15 61846207 61846335 -41648639 + B1F2 SINE Alu 23 149 0 6 1056 240 349 24 0 chr15 61846544 61846627 -41648347 + LTR16A LTR ERVL 208 292 -159 6 1056 309 277 24 0 chr15 61846772 61846855 -41648119 - PB1D10 SINE Alu -21 96 12 6 1056 279 0 0 0 chr15 61847247 61847278 -41647696 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 1056 1199 62 0 0 chr15 61847278 61847422 -41647552 - B1_Mus2 SINE Alu -3 144 1 6 1056 300 83 0 0 chr15 61847426 61847474 -41647500 + (T)n Simple_repeat Simple_repeat 1 48 0 6 1056 1234 40 0 0 chr15 61847479 61847627 -41647347 - B1_Mus1 SINE Alu 0 148 1 6 1056 995 108 157 0 chr15 61847630 61847796 -41647178 - B2_Mm2 SINE B2 -3 192 1 6 1056 808 212 57 19 chr15 61848183 61848394 -41646580 - MLT1C LTR MaLR -243 224 6 6 1056 190 250 90 90 chr15 61848398 61848543 -41646431 + L2a LINE L2 3204 3348 -78 6 1056 513 309 47 10 chr15 61848549 61848742 -41646232 - ID_B1 SINE B4 -2 222 23 6 1056 22 0 0 0 chr15 61849549 61849571 -41645403 + AT_rich Low_complexity Low_complexity 1 22 0 6 1056 424 279 43 19 chr15 61849626 61849787 -41645187 + MIR SINE MIR 63 227 -35 6 1056 681 155 7 21 chr15 61849928 61850073 -41644901 + GA-rich Low_complexity Low_complexity 2 144 0 6 1056 780 111 0 0 chr15 61850262 61850379 -41644595 + (TCCC)n Simple_repeat Simple_repeat 1 117 0 6 1056 422 265 11 156 chr15 61850386 61850565 -41644409 - RSINE1 SINE B4 -1 164 12 6 1056 281 277 151 77 chr15 61850717 61851042 -41643932 - RLTR12B LTR ERVK -19 509 161 6 1056 224 30 0 29 chr15 61851165 61851199 -41643775 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 6 1056 483 202 0 10 chr15 61851389 61851489 -41643485 - B1_Mur4 SINE Alu 0 150 52 6 1056 261 268 60 75 chr15 61851390 61851523 -41643451 - ID_B1 SINE B4 0 224 94 6 1056 1511 115 22 106 chr15 61851558 61851869 -41643105 + ORR1A4 LTR MaLR 1 285 -44 6 1056 1077 78 7 0 chr15 61851870 61852012 -41642962 + B1_Mus1 SINE Alu 1 143 -5 6 1056 1559 37 21 0 chr15 61852325 61852513 -41642461 + B2_Mm1a SINE B2 2 193 0 6 1056 367 271 40 50 chr15 61852842 61852943 -41642031 - B1F1 SINE Alu -44 105 6 6 1056 1552 52 5 16 chr15 61853054 61853248 -41641726 + B2_Mm1a SINE B2 2 193 0 6 1056 618 284 58 31 chr15 61853272 61853497 -41641477 - MER67A LTR ERV1 -288 255 25 6 1056 193 29 59 0 chr15 61853858 61853892 -41641082 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 6 1056 1127 225 191 14 chr15 61854029 61854385 -41640589 - MTD LTR MaLR 0 419 1 6 1056 1178 246 130 14 chr15 61854902 61855272 -41639702 - MTD LTR MaLR -6 413 1 6 1056 842 169 7 20 chr15 61855409 61855560 -41639414 + B1_Mur4 SINE Alu 1 149 -1 6 1056 3336 71 24 72 chr15 61855849 61856348 -41638626 - MT2C_Mm LTR ERVL 0 475 1 6 1056 1140 174 56 9 chr15 61856506 61856721 -41638253 + URR1A DNA MER1_type 2 226 0 6 1056 225 333 31 39 chr15 61858042 61858170 -41636804 - MLT1L LTR MaLR -318 292 166 6 1056 317 316 43 92 chr15 61858435 61858783 -41636191 + L1ME4a LINE L1 5636 5966 -158 6 1056 332 270 11 0 chr15 61859008 61859097 -41635877 + PB1D10 SINE Alu 1 90 -27 6 1056 273 324 26 65 chr15 61859213 61859368 -41635606 + B1F2 SINE Alu 1 149 0 6 1056 933 141 0 23 chr15 61859373 61859633 -41635341 + GA-rich Low_complexity Low_complexity 1 254 0 6 1056 324 0 0 0 chr15 61859633 61859669 -41635305 + (GAAA)n Simple_repeat Simple_repeat 1 36 0 6 1056 471 289 114 54 chr15 61859804 61859992 -41634982 + L1MA7 LINE L1 5067 5262 -881 6 1056 937 157 168 0 chr15 61859992 61860183 -41634791 - URR1B DNA MER1_type 0 225 3 6 1056 737 233 104 1 chr15 61860183 61860398 -41634576 + L1MA7 LINE L1 5263 5496 -795 6 1056 898 175 0 14 chr15 61860398 61860543 -41634431 + B1_Mur4 SINE Alu 1 143 -7 6 1056 555 296 77 132 chr15 61860543 61860613 -41634361 + L1MA7 LINE L1 5495 5523 -777 6 1056 291 93 0 0 chr15 61860613 61860656 -41634318 + (CAGG)n Simple_repeat Simple_repeat 2 44 0 6 1056 1302 78 0 0 chr15 61860658 61860838 -41634136 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 7 1056 622 300 80 109 chr15 61860838 61861329 -41633645 + L1MA7 LINE L1 5505 6010 -281 6 1056 724 285 94 28 chr15 61861696 61862014 -41632960 + L1MB2 LINE L1 5646 5984 -187 7 1056 388 209 0 127 chr15 61862234 61862360 -41632614 + MT2B LTR ERVL 155 264 -337 7 1056 1045 70 0 0 chr15 61862253 61862395 -41632579 + B1_Mus1 SINE Alu 7 148 0 7 1056 232 207 17 25 chr15 61862429 61862548 -41632426 + (TG)n Simple_repeat Simple_repeat 1 118 0 7 1056 638 109 10 0 chr15 61862548 61862649 -41632325 + (TA)n Simple_repeat Simple_repeat 1 102 0 7 1056 195 129 0 0 chr15 61862685 61862716 -41632258 + (TTTTC)n Simple_repeat Simple_repeat 4 34 0 7 1056 1236 41 0 0 chr15 61862716 61862862 -41632112 - B1_Mm SINE Alu 0 147 2 7 1056 955 293 0 20 chr15 61862865 61863119 -41631855 - B4A SINE B4 -42 250 2 7 1056 387 257 33 59 chr15 61863124 61863277 -41631697 + L1MB2 LINE L1 6030 6178 -5 7 1056 731 163 36 36 chr15 61863383 61863523 -41631451 - B1_Mur3 SINE Alu -9 140 1 7 1056 243 79 0 0 chr15 61863723 61863761 -41631213 + (G)n Simple_repeat Simple_repeat 1 38 0 7 1056 798 200 0 0 chr15 61864415 61864550 -41630424 - B1_Mur2 SINE Alu 0 149 15 7 1056 283 289 0 12 chr15 61864712 61864796 -41630178 + PB1D10 SINE Alu 10 92 -25 7 1056 309 299 10 40 chr15 61864779 61864880 -41630094 + 5S rRNA rRNA 1 98 -23 7 16 1182 99 0 0 chr15 61865821 61865992 -41628982 + (TATATG)n Simple_repeat Simple_repeat 4 174 0 7 1057 386 142 56 9 chr15 61866543 61866650 -41628324 + GA-rich Low_complexity Low_complexity 2 113 0 7 1057 360 280 0 0 chr15 61866657 61866750 -41628224 + RSINE1 SINE B4 11 103 -62 7 1057 574 226 0 23 chr15 61866754 61867019 -41627955 + CT-rich Low_complexity Low_complexity 1 258 0 7 1057 429 188 23 23 chr15 61867019 61867106 -41627868 - B1_Mus1 SINE Alu -43 105 19 7 1057 869 72 16 0 chr15 61867182 61867307 -41627667 + B1_Mus1 SINE Alu 22 148 0 7 1057 270 152 0 0 chr15 61867310 61867369 -41627605 + A-rich Low_complexity Low_complexity 1 59 0 7 1057 390 129 0 0 chr15 61867450 61867512 -41627462 + (TTTC)n Simple_repeat Simple_repeat 3 64 0 7 1057 1076 96 0 0 chr15 61867512 61867658 -41627316 - B1_Mm SINE Alu 0 147 2 7 1057 1100 144 5 41 chr15 61867693 61867888 -41627086 + RMER1C Other Other 987 1174 -168 7 1057 234 0 0 0 chr15 61867896 61867922 -41627052 + (TGG)n Simple_repeat Simple_repeat 3 28 0 7 1057 375 230 0 11 chr15 61867923 61868011 -41626963 + RMER1C Other Other 1229 1315 -27 7 1057 426 155 0 0 chr15 61870587 61870684 -41624290 + (TG)n Simple_repeat Simple_repeat 2 98 0 7 1057 279 0 0 0 chr15 61871667 61871698 -41623276 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 1057 471 290 221 3 chr15 61871724 61872022 -41622952 - Lx9 LINE L1 -28 7616 7254 7 1057 224 283 133 57 chr15 61872326 61872431 -41622543 + RSINE1 SINE B4 31 143 -22 7 1057 387 0 0 0 chr15 61872444 61872487 -41622487 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1057 492 200 175 0 chr15 61872494 61872614 -41622360 + B1F SINE Alu 1 141 -8 7 1057 288 322 23 0 chr15 61872753 61872840 -41622134 - 5S rRNA rRNA -31 90 2 7 1057 231 367 38 0 chr15 61873074 61873153 -41621821 - B1F1 SINE Alu -58 91 10 7 1057 324 158 0 0 chr15 61873240 61873297 -41621677 + (TCG)n Simple_repeat Simple_repeat 2 58 0 7 1057 628 197 24 0 chr15 61874134 61874261 -41620713 - B1_Mur4 SINE Alu -20 130 1 7 1057 273 256 35 11 chr15 61874264 61874351 -41620623 - PB1D10 SINE Alu 0 117 29 7 1057 446 251 38 25 chr15 61874424 61874617 -41620357 - B3 SINE B2 0 195 4 7 1057 205 236 107 0 chr15 61875559 61875646 -41619328 - L2b LINE L2 -19 3407 3305 7 1057 495 48 0 0 chr15 61875692 61875754 -41619220 + (TG)n Simple_repeat Simple_repeat 1 62 0 7 1057 310 176 295 29 chr15 61876520 61876625 -41618349 - B4 SINE B4 0 292 160 7 1057 240 206 78 16 chr15 61876644 61876708 -41618266 - B4 SINE B4 -223 69 2 7 1057 215 160 78 142 chr15 61876717 61876805 -41618169 - B1F SINE Alu -6 143 26 7 1057 386 237 66 85 chr15 61877122 61877334 -41617640 + Charlie5 DNA MER1_type 2371 2578 -46 7 1057 1150 56 14 0 chr15 61877341 61877483 -41617491 - B1_Mm SINE Alu -2 145 2 7 1057 274 276 112 0 chr15 61877695 61877793 -41617181 + ID_B1 SINE B4 112 220 -4 7 1057 1289 69 0 11 chr15 61878142 61878363 -41616611 - L1Md_T LINE L1 0 6582 6409 7 1057 513 141 0 0 chr15 61878363 61878409 -41616565 + (T)n Simple_repeat Simple_repeat 1 46 0 7 1057 1117 88 0 7 chr15 61878410 61878558 -41616416 - B1_Mus1 SINE Alu -1 147 1 7 1057 250 269 0 43 chr15 61878732 61878802 -41616172 + ID4_ SINE ID 2 68 -15 7 1057 261 0 0 0 chr15 61879277 61879306 -41615668 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1057 225 108 0 0 chr15 61879493 61879530 -41615444 + (TC)n Simple_repeat Simple_repeat 2 38 0 7 1057 1041 102 0 0 chr15 61879571 61879708 -41615266 - B1_Mus1 SINE Alu -10 138 2 7 1057 243 324 0 0 chr15 61879710 61879784 -41615190 - B1F SINE Alu -1 148 75 7 1057 340 261 16 87 chr15 61880226 61880352 -41614622 + RSINE1 SINE B4 25 141 -24 7 1057 315 0 0 0 chr15 61880440 61880475 -41614499 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1057 305 314 106 55 chr15 61880686 61880942 -41614032 - L1ME1 LINE L1 -54 6125 5857 7 1057 225 304 12 12 chr15 61881402 61881482 -41613492 + CT-rich Low_complexity Low_complexity 3 82 0 7 1057 4326 216 71 31 chr15 61881506 61881669 -41613305 - Lx9 LINE L1 0 7644 7477 7 1057 324 0 0 0 chr15 61881669 61881705 -41613269 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1057 4326 216 71 31 chr15 61881705 61882603 -41612371 - Lx9 LINE L1 -168 7476 6541 7 1057 426 328 72 0 chr15 61882606 61882731 -41612243 - B1F1 SINE Alu -11 138 5 7 1057 690 294 87 89 chr15 61882736 61882834 -41612140 + MTD LTR MaLR 18 119 -300 7 1057 261 83 0 0 chr15 61882834 61882870 -41612104 + (TTAA)n Simple_repeat Simple_repeat 2 37 0 7 1057 690 294 87 89 chr15 61882870 61883174 -41611800 + MTD LTR MaLR 120 418 -1 7 1057 250 0 19 74 chr15 61883192 61883246 -41611728 + (TTTTG)n Simple_repeat Simple_repeat 4 54 0 7 1057 1138 90 0 0 chr15 61883247 61883392 -41611582 - B1_Mus2 SINE Alu -1 146 2 7 1057 723 269 144 11 chr15 61883403 61883779 -41611195 - L1MA6 LINE L1 -5 6295 5870 7 1057 336 260 13 0 chr15 61883844 61883921 -41611053 + ID_B1 SINE B4 110 187 -37 7 1057 442 275 74 16 chr15 61883974 61884096 -41610878 - B1_Mus1 SINE Alu -10 138 10 7 1057 35 24 0 0 chr15 61884280 61884322 -41610652 + AT_rich Low_complexity Low_complexity 1 42 0 7 1057 327 25 0 0 chr15 61884365 61884405 -41610569 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1057 219 360 22 0 chr15 61884524 61884613 -41610361 - L2c LINE L2 -322 3065 2975 7 1057 405 76 12 25 chr15 61885783 61885864 -41609110 + (TTTTG)n Simple_repeat Simple_repeat 2 81 0 7 1057 1192 68 0 0 chr15 61885869 61886016 -41608958 - B1_Mm SINE Alu 0 147 1 7 1057 820 150 35 14 chr15 61886019 61886161 -41608813 - B1_Mm SINE Alu -2 145 1 7 1057 204 276 13 13 chr15 61886713 61886789 -41608185 + L2c LINE L2 3072 3150 -237 7 1057 21 0 0 0 chr15 61887168 61887189 -41607785 + AT_rich Low_complexity Low_complexity 1 21 0 7 1057 243 250 47 0 chr15 61887213 61887277 -41607697 + PB1D9 SINE Alu 33 99 -21 7 1057 1178 277 19 16 chr15 61887280 61887658 -41607316 - MTEa LTR MaLR 0 379 1 7 1057 189 0 0 0 chr15 61888334 61888355 -41606619 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1057 498 313 15 53 chr15 61888593 61888799 -41606175 + B3A SINE B2 1 198 0 7 1057 319 288 8 111 chr15 61888928 61889045 -41605929 + PB1 SINE Alu 12 116 -11 7 1057 352 249 68 11 chr15 61889113 61889227 -41605747 - L1MB4 LINE L1 -62 6121 6004 7 1057 323 236 79 0 chr15 61889355 61889444 -41605530 - L1MB4 LINE L1 -736 5442 5347 7 1057 272 229 119 37 chr15 61889463 61889572 -41605402 - L1MB4 LINE L1 -852 5294 5177 7 1057 637 319 62 5 chr15 61889608 61889816 -41605158 - ID_B1 SINE B4 -3 221 2 7 1057 227 342 52 35 chr15 61889964 61890079 -41604895 - MT2B2 LTR ERVL -303 281 165 7 1057 297 75 0 0 chr15 61890346 61890386 -41604588 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1057 496 220 0 11 chr15 61890584 61890676 -41604298 - B1_Mm SINE Alu -56 91 1 7 1057 360 191 19 144 chr15 61890676 61890688 -41604286 - MT2B LTR ERVL -355 246 156 7 1057 196 312 127 28 chr15 61891393 61891535 -41603439 + MIRb SINE MIR 105 260 -8 7 1057 232 295 54 54 chr15 61891819 61891930 -41603044 - MIRc SINE MIR -96 172 62 7 1057 207 0 0 0 chr15 61892310 61892333 -41602641 + (T)n Simple_repeat Simple_repeat 1 23 0 7 1057 958 173 51 25 chr15 61892907 61893273 -41601701 - RMER17C LTR ERVK 0 410 1 7 1057 1411 86 16 0 chr15 61893621 61893807 -41601167 + B2_Mm2 SINE B2 2 190 -5 7 1057 30 27 0 0 chr15 61894020 61894057 -41600917 + AT_rich Low_complexity Low_complexity 1 37 0 7 1057 406 262 184 0 chr15 61894057 61894199 -41600775 + MER33 DNA MER1_type 75 236 -88 7 1057 216 0 0 0 chr15 61894199 61894223 -41600751 + (TC)n Simple_repeat Simple_repeat 2 25 0 7 1057 459 92 0 0 chr15 61894223 61894287 -41600687 + (TA)n Simple_repeat Simple_repeat 2 66 0 7 1057 406 262 184 0 chr15 61894287 61894349 -41600625 + MER33 DNA MER1_type 237 316 -8 7 1057 365 281 87 10 chr15 61894736 61894840 -41600134 + ID_B1 SINE B4 87 198 -26 7 1057 456 19 0 0 chr15 61894856 61894909 -41600065 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 7 1057 572 265 152 16 chr15 61895042 61895226 -41599748 + Tigger7 DNA MER2_type 277 485 -2006 7 1057 415 218 97 76 chr15 61895205 61895349 -41599625 + Tigger7 DNA MER2_type 2322 2468 -23 7 1057 497 264 0 43 chr15 61895412 61895598 -41599376 + CT-rich Low_complexity Low_complexity 1 178 0 7 1057 211 267 44 44 chr15 61895534 61895671 -41599303 + (CTCCG)n Simple_repeat Simple_repeat 5 141 0 7 1057 259 293 13 0 chr15 61896142 61896217 -41598757 - B1F SINE Alu -62 87 12 7 1057 1239 119 0 0 chr15 61896438 61896614 -41598360 - B2_Mm2 SINE B2 -19 176 1 8 1057 1226 128 0 6 chr15 61896974 61897154 -41597820 + B2_Mm2 SINE B2 1 179 -16 8 1057 239 241 134 37 chr15 61897233 61897315 -41597659 + B1F SINE Alu 9 98 -51 8 1057 197 180 0 20 chr15 61897341 61897392 -41597582 + GA-rich Low_complexity Low_complexity 1 50 0 8 1057 228 310 74 41 chr15 61897699 61897820 -41597154 + MIRc SINE MIR 73 197 -71 8 1057 342 185 73 42 chr15 61898069 61898165 -41596809 + HAL1-3A_ME LINE L1 1914 2012 -846 8 1057 247 329 0 0 chr15 61898166 61898245 -41596729 + (CATATA)n Simple_repeat Simple_repeat 6 84 0 8 1057 665 273 71 15 chr15 61898432 61898629 -41596345 - ID_B1 SINE B4 -12 212 5 8 1057 324 307 8 50 chr15 61899314 61899434 -41595540 - Charlie26a DNA MER1_type 0 325 211 8 1057 255 61 0 0 chr15 61900047 61900080 -41594894 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 8 1057 201 331 104 39 chr15 61900583 61900737 -41594237 + MIRc SINE MIR 26 189 -79 8 1057 298 362 29 0 chr15 61900842 61900947 -41594027 - MER117 DNA MER1_type -36 161 54 8 1057 253 189 19 0 chr15 61901937 61901990 -41592984 - MER5A DNA MER1_type 0 189 136 8 1057 306 282 13 0 chr15 61902266 61902344 -41592630 + ID4 SINE ID 5 83 0 8 1057 3011 3 0 0 chr15 61902377 61902706 -41592268 - L1Md_A LINE L1 0 6582 6254 8 1057 220 311 27 0 chr15 61902946 61903020 -41591954 + CT-rich Low_complexity Low_complexity 3 78 0 8 1057 799 44 17 17 chr15 61903641 61903653 -41591321 + (TTCCC)n Simple_repeat Simple_repeat 2 12 0 8 1057 342 0 0 0 chr15 61903653 61903691 -41591283 + (TC)n Simple_repeat Simple_repeat 1 38 0 8 1057 799 44 17 17 chr15 61903691 61903794 -41591180 + (TTCCC)n Simple_repeat Simple_repeat 2 106 0 8 1057 780 115 0 0 chr15 61903776 61903898 -41591076 + (TTCC)n Simple_repeat Simple_repeat 1 122 0 8 1057 447 243 61 26 chr15 61904322 61904436 -41590538 + PB1D7 SINE Alu 3 120 0 8 1057 232 304 12 12 chr15 61904436 61904516 -41590458 + GA-rich Low_complexity Low_complexity 3 82 0 8 1057 410 176 12 0 chr15 61904559 61904644 -41590330 + CT-rich Low_complexity Low_complexity 2 87 0 8 1057 478 276 64 105 chr15 61905174 61905393 -41589581 - MIR SINE MIR -28 234 25 8 1057 823 193 96 82 chr15 61905731 61905951 -41589023 - URR1B DNA MER1_type -2 223 1 8 1057 899 155 14 0 chr15 61906618 61906766 -41588208 + B1_Mur4 SINE Alu 1 150 0 8 1057 390 301 113 55 chr15 61906980 61907324 -41587650 + L1MC4a LINE L1 5597 5960 -1922 8 1057 529 238 93 26 chr15 61907507 61907658 -41587316 + RSINE1 SINE B4 4 164 -1 8 1057 398 212 37 12 chr15 61908770 61908851 -41586123 + B3 SINE B2 67 149 -67 8 1057 480 175 0 0 chr15 61908866 61908963 -41586011 + (TAAG)n Simple_repeat Simple_repeat 3 99 0 8 1057 530 186 68 23 chr15 61908992 61909124 -41585850 - RCHARR1 DNA MER1_type -760 214 77 8 1057 1237 48 0 0 chr15 61909135 61909281 -41585693 - B1_Mm SINE Alu -1 146 1 8 1057 480 111 0 0 chr15 61909332 61909404 -41585570 + (CA)n Simple_repeat Simple_repeat 2 73 0 8 1057 181 333 26 53 chr15 61909558 61909634 -41585340 + MIR SINE MIR 101 174 -88 8 1057 564 92 11 44 chr15 61909639 61909730 -41585244 + B1_Mm SINE Alu 60 147 0 8 1057 195 69 0 0 chr15 61909733 61909762 -41585212 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8 1057 423 0 0 0 chr15 61909764 61909811 -41585163 + (TA)n Simple_repeat Simple_repeat 1 47 0 8 1057 833 180 0 6 chr15 61909966 61910134 -41584840 + CT-rich Low_complexity Low_complexity 4 170 0 8 1057 696 204 29 7 chr15 61910139 61910277 -41584697 - B1_Mur2 SINE Alu -7 142 2 8 1057 342 0 0 0 chr15 61911537 61911575 -41583399 + (T)n Simple_repeat Simple_repeat 1 38 0 8 1057 1064 52 0 0 chr15 61912884 61913019 -41581955 + B1_Mus1 SINE Alu 2 136 -12 8 1057 243 0 0 0 chr15 61913019 61913046 -41581928 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 8 1057 565 235 0 73 chr15 61913050 61913174 -41581800 - RSINE1 SINE B4 0 165 51 8 1057 21 0 0 0 chr15 61913873 61913894 -41581080 + GC_rich Low_complexity Low_complexity 1 21 0 8 1057 333 212 16 35 chr15 61915423 61915515 -41579459 + PB1D10 SINE Alu 1 90 -59 8 1057 336 238 0 0 chr15 61916207 61916270 -41578704 - ID4_ SINE ID -18 65 3 8 1057 256 296 64 90 chr15 61916273 61916429 -41578545 - MER34 LTR ERV1 -97 445 294 8 1057 1627 179 84 26 chr15 61916492 61916837 -41578137 - ORR1B2 LTR MaLR 0 367 3 8 1057 285 29 0 0 chr15 61917811 61917845 -41577129 + (T)n Simple_repeat Simple_repeat 1 34 0 8 1057 252 0 0 0 chr15 61918104 61918132 -41576842 + (CA)n Simple_repeat Simple_repeat 2 29 0 8 1057 332 73 36 0 chr15 61918151 61918206 -41576768 + (TCTCTG)n Simple_repeat Simple_repeat 2 58 0 8 1057 333 297 27 0 chr15 61919961 61920035 -41574939 - ID4_ SINE ID -4 79 4 8 1057 536 263 71 87 chr15 61920769 61920965 -41574009 + B3A SINE B2 1 193 -2 8 1057 700 256 45 63 chr15 61921012 61921076 -41573898 + ID SINE ID 6 71 -153 8 1057 2034 131 83 52 chr15 61921076 61921462 -41573512 + RMER10B LTR ERVL 1 398 0 8 1057 700 256 45 63 chr15 61921462 61921618 -41573356 + ID_B1 SINE B4 72 222 -2 8 1057 1931 166 91 60 chr15 61921674 61922090 -41572884 - RLTR23 LTR ERV1 0 430 2 8 1057 630 269 38 11 chr15 61922256 61922440 -41572534 - RLTR6-int LTR ERV1 -287 7491 7303 8 1057 492 99 0 0 chr15 61924919 61924990 -41569984 + (TCTA)n Simple_repeat Simple_repeat 3 73 0 8 1057 897 179 36 0 chr15 61925353 61925521 -41569453 - RMER10A LTR ERVL -268 174 1 8 1057 790 219 117 50 chr15 61925657 61925692 -41569282 - Lx6 LINE L1 0 7460 7431 8 1057 670 12 0 0 chr15 61925692 61925775 -41569199 + L1Md_T LINE L1 6499 6581 -1 8 1057 790 219 117 50 chr15 61925775 61925979 -41568995 - Lx6 LINE L1 -30 7430 7205 8 1057 285 29 0 0 chr15 61926458 61926492 -41568482 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 8 1057 682 157 359 0 chr15 61926502 61926661 -41568313 - B3 SINE B2 0 216 1 8 1057 294 267 13 51 chr15 61926775 61926854 -41568120 - B1F1 SINE Alu -71 78 3 8 1057 755 178 81 7 chr15 61927244 61927380 -41567594 + B1_Mus2 SINE Alu 2 147 0 8 1057 375 23 0 0 chr15 61927510 61927554 -41567420 + (TC)n Simple_repeat Simple_repeat 2 45 0 8 1057 1175 51 0 0 chr15 61927555 61927692 -41567282 - B1_Mm SINE Alu -6 141 5 8 1057 1773 251 12 40 chr15 61928689 61929116 -41565858 + MTD LTR MaLR 3 417 -2 8 1057 22 0 0 0 chr15 61929129 61929151 -41565823 + AT_rich Low_complexity Low_complexity 1 22 0 8 1057 297 0 0 0 chr15 61929448 61929481 -41565493 + (TG)n Simple_repeat Simple_repeat 1 33 0 8 1057 450 0 0 0 chr15 61929481 61929530 -41565444 + (GA)n Simple_repeat Simple_repeat 1 50 0 8 1057 620 319 0 35 chr15 61929870 61930039 -41564935 - RSINE1 SINE B4 0 165 3 8 1057 316 330 89 15 chr15 61931149 61931352 -41563622 - MER44A DNA MER2_type -99 240 23 8 1057 531 137 0 0 chr15 61931554 61931650 -41563324 - B1_Mus2 SINE Alu 0 149 54 8 1057 296 328 0 0 chr15 61931765 61931829 -41563145 - ID4_ SINE ID -16 67 4 8 1057 1180 68 7 0 chr15 61931860 61932006 -41562968 + B1_Mus2 SINE Alu 1 147 0 8 1057 629 300 39 6 chr15 61932059 61932240 -41562734 - B3 SINE B2 -27 189 3 8 1057 789 186 21 0 chr15 61932274 61932414 -41562560 + B1_Mur3 SINE Alu 1 143 -6 8 1057 424 340 121 0 chr15 61932439 61932580 -41562394 - RSINE1 SINE B4 -2 163 6 8 1057 352 366 0 0 chr15 61932817 61932918 -41562056 - ID_B1 SINE B4 -15 209 109 8 1057 217 308 205 55 chr15 61932884 61932928 -41562046 - B4 SINE B4 -146 146 32 8 1057 265 271 0 41 chr15 61932928 61933001 -41561973 - ID4_ SINE ID -8 75 6 8 1057 307 319 7 98 chr15 61933037 61933190 -41561784 - ID_B1 SINE B4 -9 215 77 8 1057 31 0 0 0 chr15 61933355 61933386 -41561588 + AT_rich Low_complexity Low_complexity 1 31 0 8 1057 372 145 11 18 chr15 61934221 61934333 -41560641 - MT2A LTR ERVL 0 533 366 8 1057 454 355 31 36 chr15 61934389 61934611 -41560363 - MTEa LTR MaLR -158 221 1 8 1057 744 183 21 146 chr15 61934796 61934931 -41560043 - B2_Mm2 SINE B2 -26 169 37 8 1057 1183 14 0 35 chr15 61934931 61935074 -41559900 + B1_Mus1 SINE Alu 5 142 -6 8 1057 744 183 21 146 chr15 61935074 61935130 -41559844 - B2_Mm2 SINE B2 -159 36 2 8 1057 816 65 0 0 chr15 61935164 61935271 -41559703 + (TCCC)n Simple_repeat Simple_repeat 2 108 0 8 1057 598 244 16 0 chr15 61935275 61935402 -41559572 - B3 SINE B2 0 216 88 8 1057 384 22 0 0 chr15 61936633 61936678 -41558296 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 1057 384 298 0 41 chr15 61936852 61936950 -41558024 - RSINE1 SINE B4 -29 136 43 8 1057 261 0 0 0 chr15 61937016 61937045 -41557929 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 1057 279 133 0 0 chr15 61937685 61937730 -41557244 + (TCCC)n Simple_repeat Simple_repeat 4 48 0 8 1057 198 0 0 0 chr15 61938561 61938583 -41556391 + (TA)n Simple_repeat Simple_repeat 2 23 0 8 1057 1299 62 77 11 chr15 61939239 61939257 -41555717 - B2_Mm1a SINE B2 0 193 176 8 1057 288 77 0 0 chr15 61939257 61939296 -41555678 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 8 1057 1299 62 77 11 chr15 61939296 61939458 -41555516 - B2_Mm1a SINE B2 -18 175 2 8 1057 794 159 171 26 chr15 61940918 61941111 -41553863 + URR1A DNA MER1_type 6 226 0 8 1057 199 381 26 26 chr15 61941662 61941778 -41553196 + MIR SINE MIR 36 151 -57 8 1057 208 277 0 0 chr15 61941966 61942031 -41552943 + (TGG)n Simple_repeat Simple_repeat 1 65 0 8 1057 333 0 0 0 chr15 61942975 61943012 -41551962 + (CA)n Simple_repeat Simple_repeat 2 38 0 9 1057 589 264 4 206 chr15 61943077 61943339 -41551635 - B3 SINE B2 -7 209 1 9 1057 184 333 107 90 chr15 61943676 61943798 -41551176 - L4 LINE RTE -111 1918 1795 9 1057 717 251 90 25 chr15 61943828 61944028 -41550946 - MER58A DNA MER1_type -1 223 11 9 1057 1922 204 93 24 chr15 61944597 61945090 -41549884 + RLTR11A2 LTR ERVK 1 527 0 9 1057 336 280 14 132 chr15 61945514 61945658 -41549316 + MT2B LTR ERVL 153 279 -322 9 1057 770 228 0 58 chr15 61945534 61945688 -41549286 + B1_Mur4 SINE Alu 6 150 0 9 1057 229 366 38 112 chr15 61945688 61945848 -41549126 - MamGypLTR2b LTR Gypsy -712 210 63 9 1057 378 42 0 0 chr15 61947585 61947633 -41547341 + (TG)n Simple_repeat Simple_repeat 1 48 0 9 1057 372 200 24 59 chr15 61948028 61948113 -41546861 - B1F1 SINE Alu -19 98 15 9 1057 284 324 146 9 chr15 61948827 61948994 -41545980 + MIRb SINE MIR 50 241 -27 9 1057 638 268 82 10 chr15 61950338 61950525 -41544449 - ID_B1 SINE B4 -76 216 2 9 1057 768 119 0 0 chr15 61952098 61952216 -41542758 + (GGAA)n Simple_repeat Simple_repeat 4 121 0 9 1057 336 295 55 50 chr15 61953057 61953286 -41541688 - MIR SINE MIR 0 262 44 9 1057 258 271 209 54 chr15 61954258 61954406 -41540568 - MIR SINE MIR -36 226 56 9 1057 664 48 0 0 chr15 61954558 61954641 -41540333 - B1_Mur4 SINE Alu 0 150 68 9 1057 212 293 48 24 chr15 61955266 61955350 -41539624 + MIR SINE MIR 109 194 -68 9 1057 317 304 17 9 chr15 61955957 61956073 -41538901 + (TCCA)n Simple_repeat Simple_repeat 2 118 0 9 1057 186 246 0 0 chr15 61956194 61956255 -41538719 + (TCCA)n Simple_repeat Simple_repeat 2 62 0 9 1057 427 72 0 28 chr15 61956973 61957079 -41537895 - L1Md_F2 LINE L1 0 6582 6491 9 1057 462 114 0 0 chr15 61958262 61958332 -41536642 + (TCC)n Simple_repeat Simple_repeat 2 71 0 9 1057 430 327 17 46 chr15 61958343 61958553 -41536421 - ID_B1 SINE B4 -117 175 1 9 1057 1048 102 0 7 chr15 61959749 61959887 -41535087 - B1_Mus1 SINE Alu -11 137 1 9 1057 310 238 11 81 chr15 61960189 61960276 -41534698 + MIR SINE MIR 179 259 -3 9 1057 413 318 247 14 chr15 61960304 61960648 -41534326 + Tigger13a DNA MER2_type 157 580 -191 9 1057 396 0 0 0 chr15 61960736 61960780 -41534194 + (TG)n Simple_repeat Simple_repeat 1 44 0 9 1057 713 151 108 31 chr15 61960791 61960921 -41534053 - B1_Mur4 SINE Alu -10 140 1 9 1057 749 271 16 111 chr15 61961200 61961515 -41533459 + B4 SINE B4 2 286 -6 9 1057 1650 166 53 0 chr15 61961606 61961890 -41533084 + MTC LTR MaLR 123 421 0 9 1057 372 43 0 0 chr15 61962220 61962266 -41532708 + (CA)n Simple_repeat Simple_repeat 2 47 0 9 1057 224 289 50 50 chr15 61962451 61962531 -41532443 - ID4_ SINE ID -1 82 3 9 1057 183 42 0 0 chr15 61962677 61962701 -41532273 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 9 1057 283 300 99 11 chr15 61962727 61962818 -41532156 - PB1D10 SINE Alu -18 99 1 9 1057 1360 191 115 21 chr15 61963484 61963815 -41531159 + ORR1D1 LTR MaLR 13 374 0 9 1057 312 325 22 89 chr15 61963930 61964065 -41530909 + RSINE1 SINE B4 40 165 0 9 1057 450 0 0 0 chr15 61964204 61964254 -41530720 + (TG)n Simple_repeat Simple_repeat 1 50 0 9 1057 279 0 0 0 chr15 61964258 61964289 -41530685 + (TCTG)n Simple_repeat Simple_repeat 3 33 0 9 1057 568 284 66 73 chr15 61965077 61965517 -41529457 - L1MB8 LINE L1 -2 6176 5740 9 1057 792 21 0 0 chr15 61966172 61966266 -41528708 + (CATCC)n Simple_repeat Simple_repeat 4 97 0 9 1057 201 263 88 88 chr15 61966708 61966833 -41528141 + MIRc SINE MIR 2 126 -142 9 1057 2231 128 3 15 chr15 61967096 61967429 -41527545 - ORR1A4 LTR MaLR 0 329 1 9 1057 452 305 88 20 chr15 61967677 61967881 -41527093 + MER31A LTR ERV1 110 327 -158 9 1057 806 80 116 0 chr15 61967874 61967986 -41526988 - B2_Mm2 SINE B2 -69 126 2 9 1057 542 308 6 43 chr15 61967986 61968148 -41526826 + MTEa LTR MaLR 15 170 -209 9 1057 903 168 0 0 chr15 61969825 61969992 -41524982 + CT-rich Low_complexity Low_complexity 2 168 0 9 1057 947 135 7 13 chr15 61969992 61970004 -41524970 - B1_Mur4 SINE Alu -1 149 139 9 1057 261 0 0 0 chr15 61970004 61970033 -41524941 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 9 1057 947 135 7 13 chr15 61970033 61970170 -41524804 - B1_Mur4 SINE Alu -12 138 1 9 1057 467 287 19 39 chr15 61971432 61971588 -41523386 - ID_B1 SINE B4 0 224 72 9 1057 303 49 0 0 chr15 61971907 61971948 -41523026 + (TCTG)n Simple_repeat Simple_repeat 4 44 0 9 1057 201 123 138 0 chr15 61971971 61972036 -41522938 + (CTATT)n Simple_repeat Simple_repeat 5 78 0 9 1057 232 388 71 29 chr15 61972049 61972219 -41522755 - MIRb SINE MIR -23 245 69 9 1057 316 274 62 21 chr15 61972294 61972391 -41522583 + MIRb SINE MIR 87 187 -81 9 1057 1186 246 79 52 chr15 61975707 61975907 -41519067 - MTE2b LTR MaLR 0 379 182 9 1057 1282 41 0 0 chr15 61975907 61976054 -41518920 - B1_Mus2 SINE Alu 0 147 1 9 1057 1186 246 79 52 chr15 61976054 61976222 -41518752 - MTE2b LTR MaLR -198 181 1 9 1057 487 261 97 54 chr15 61977633 61977819 -41517155 - MER20 DNA MER1_type -1 218 25 9 1057 984 249 70 74 chr15 61977970 61978129 -41516845 - MTEa LTR MaLR -67 312 167 9 1057 315 0 0 0 chr15 61978129 61978164 -41516810 + (TC)n Simple_repeat Simple_repeat 2 36 0 9 1057 984 249 70 74 chr15 61978164 61978316 -41516658 - MTEa LTR MaLR -213 166 2 9 1057 1258 28 0 0 chr15 61980162 61980304 -41514670 - B1_Mus1 SINE Alu -6 142 1 9 1057 811 294 59 33 chr15 61981135 61981472 -41513502 + MLT1B LTR MaLR 38 383 -7 9 1057 225 94 0 0 chr15 61981902 61981934 -41513040 + (TG)n Simple_repeat Simple_repeat 2 33 0 9 1057 547 130 7 218 chr15 61982687 61982834 -41512140 + B1_Mur2 SINE Alu 3 118 -31 9 1057 510 17 0 0 chr15 61982837 61982896 -41512078 + (GA)n Simple_repeat Simple_repeat 2 60 0 9 1057 456 229 34 68 chr15 61982922 61983039 -41511935 - B3A SINE B2 -2 196 84 9 1057 445 296 51 25 chr15 61983035 61983153 -41511821 - B4A SINE B4 -168 124 4 9 1057 245 373 0 3 chr15 61984293 61984381 -41510593 + ID4 SINE ID 5 91 -61 9 1057 234 109 30 30 chr15 61984576 61984642 -41510332 + A-rich Low_complexity Low_complexity 2 67 0 9 1057 261 0 0 0 chr15 61984678 61984707 -41510267 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 9 1057 208 337 48 19 chr15 61984843 61984946 -41510028 + MIRc SINE MIR 120 225 -43 9 1057 530 254 46 0 chr15 61985594 61985724 -41509250 + B1_Mur1 SINE Alu 14 149 0 9 1057 21 0 0 0 chr15 61986241 61986262 -41508712 + AT_rich Low_complexity Low_complexity 1 21 0 9 1057 643 262 7 27 chr15 61986279 61986428 -41508546 - B1_Mus2 SINE Alu 0 147 2 9 1057 271 287 99 0 chr15 61986741 61986842 -41508132 - PB1D10 SINE Alu -6 111 1 9 1057 327 312 72 56 chr15 61987094 61987221 -41507753 + MLT1B LTR MaLR 58 190 -200 9 1057 261 0 0 0 chr15 61987221 61987250 -41507724 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 9 1057 327 312 72 56 chr15 61987250 61987302 -41507672 + MLT1B LTR MaLR 191 240 -150 9 1057 1095 52 0 0 chr15 61988183 61988319 -41506655 + B1_Mm SINE Alu 9 144 -3 9 1057 885 19 0 0 chr15 61988388 61988491 -41506483 + (TCC)n Simple_repeat Simple_repeat 1 103 0 9 1057 197 225 50 0 chr15 61990824 61990864 -41504110 - MIRm SINE MIR -115 161 120 9 1057 184 211 105 0 chr15 61990830 61990868 -41504106 - MIRc SINE MIR -118 150 109 9 1057 487 312 58 6 chr15 61992521 61992695 -41502279 + MER58A DNA MER1_type 42 224 0 9 1057 1075 299 63 73 chr15 61993066 61993448 -41501526 - MTEa LTR MaLR 0 379 2 9 1057 335 250 18 3 chr15 61993570 61993658 -41501316 + MIRm SINE MIR 85 174 -94 9 1057 669 312 36 16 chr15 61995104 61995296 -41499678 - B4 SINE B4 -10 282 87 9 1057 264 264 112 9 chr15 61995675 61995782 -41499192 - L1M5 LINE L1 -464 5660 5543 9 1057 392 71 47 12 chr15 61996101 61996187 -41498787 + (TTTG)n Simple_repeat Simple_repeat 2 90 0 9 1057 321 82 0 0 chr15 61996413 61996462 -41498512 + (GA)n Simple_repeat Simple_repeat 1 49 0 9 1057 231 253 84 68 chr15 61996926 61997014 -41497960 - PB1 SINE Alu -8 119 32 9 1058 26 0 0 0 chr15 61997313 61997339 -41497635 + AT_rich Low_complexity Low_complexity 1 26 0 9 1058 254 67 65 32 chr15 61999934 61999996 -41494978 + A-rich Low_complexity Low_complexity 2 65 0 9 1058 453 224 41 0 chr15 62000016 62000114 -41494860 - B1F SINE Alu -39 110 9 1 1058 573 316 155 26 chr15 62000178 62000487 -41494487 - LTR16A LTR ERVL -41 410 62 2 1058 251 196 0 21 chr15 62002227 62002274 -41492700 - RMER30 DNA MER1_type -149 53 8 3 1058 258 70 0 66 chr15 62002433 62002494 -41492480 + (TTTTTG)n Simple_repeat Simple_repeat 3 59 0 4 1058 390 69 0 0 chr15 62005736 62005794 -41489180 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1058 717 233 0 23 chr15 62006186 62006318 -41488656 + RSINE1 SINE B4 2 130 -35 6 1058 341 298 108 47 chr15 62006196 62006344 -41488630 + B3A SINE B2 11 167 -31 7 1058 229 333 105 30 chr15 62006417 62006451 -41488523 - ID_B1 SINE B4 -2 222 84 8 1058 255 298 138 0 chr15 62006451 62006545 -41488429 - B1F2 SINE Alu -40 109 3 9 1058 1157 89 6 0 chr15 62006545 62006713 -41488261 + (TCTCC)n Simple_repeat Simple_repeat 2 170 0 1 1058 554 316 19 31 chr15 62006761 62006921 -41488053 - RSINE1 SINE B4 0 165 8 1 1058 396 0 0 0 chr15 62007207 62007251 -41487723 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1058 277 324 0 47 chr15 62009132 62009239 -41485735 + MLT1A0 LTR MaLR 257 358 -7 1 1058 192 222 0 22 chr15 62010203 62010249 -41484725 - MIRc SINE MIR -10 258 214 1 1058 803 159 8 31 chr15 62010880 62011010 -41483964 + B1_Mur4 SINE Alu 11 137 -13 1 1058 468 316 62 94 chr15 62011035 62011491 -41483483 - MLT2B2 LTR ERVL 0 555 18 1 1058 531 0 0 0 chr15 62012166 62012225 -41482749 + (CATCT)n Simple_repeat Simple_repeat 2 60 0 1 1058 692 311 120 24 chr15 62013384 62013717 -41481257 - MLT1A0 LTR MaLR 0 365 1 1 1058 1475 173 203 20 chr15 62013978 62014332 -41480642 - MTD LTR MaLR 0 419 1 1 1058 517 326 0 0 chr15 62014764 62014893 -41480081 + ID_B1 SINE B4 89 217 -7 2 1058 1172 180 139 8 chr15 62015038 62015072 -41479902 - ORR1C1 LTR MaLR -84 300 262 2 1058 189 94 0 0 chr15 62015072 62015104 -41479870 + (CAA)n Simple_repeat Simple_repeat 3 34 0 2 1058 1251 178 28 14 chr15 62015104 62015327 -41479647 - ORR1C1 LTR MaLR -123 261 9 2 1058 330 282 144 39 chr15 62015447 62015628 -41479346 - MLT1A LTR MaLR 0 374 175 2 1058 473 289 49 37 chr15 62015693 62015855 -41479119 - RSINE1 SINE B4 0 165 2 2 1058 267 169 61 61 chr15 62015976 62016022 -41478952 - MT2A LTR ERVL -23 510 460 2 1058 315 0 0 0 chr15 62016022 62016057 -41478917 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1058 267 169 61 61 chr15 62016057 62016092 -41478882 - MT2A LTR ERVL -74 459 429 2 1058 603 179 9 19 chr15 62016150 62016258 -41478716 + MT2A LTR ERVL 198 304 -229 2 1058 235 289 138 60 chr15 62016325 62016557 -41478417 - L1MC4a LINE L1 -829 7053 6804 2 1058 287 150 335 26 chr15 62016551 62016680 -41478294 + L1MC4a LINE L1 7432 7614 -428 2 1058 761 299 100 22 chr15 62016681 62016951 -41478023 + B4 SINE B4 1 291 -1 3 1058 364 301 48 0 chr15 62017007 62017090 -41477884 + B1F1 SINE Alu 8 94 -55 3 1058 216 178 22 0 chr15 62017382 62017427 -41477547 - B4 SINE B4 -245 47 2 3 1058 236 28 0 53 chr15 62017577 62017615 -41477359 + (TTG)n Simple_repeat Simple_repeat 1 36 0 3 1058 1114 75 0 14 chr15 62017615 62017758 -41477216 - B1_Mus2 SINE Alu 0 147 6 3 1058 219 69 0 0 chr15 62017997 62018026 -41476948 + (TATG)n Simple_repeat Simple_repeat 3 31 0 3 1058 930 85 0 0 chr15 62018416 62018545 -41476429 + (TG)n Simple_repeat Simple_repeat 2 130 0 3 1058 293 297 66 0 chr15 62018895 62018986 -41475988 - B1F2 SINE Alu 0 149 53 3 1058 762 206 14 0 chr15 62022313 62022459 -41472515 + B1_Mus1 SINE Alu 1 148 0 3 1058 608 273 6 78 chr15 62022864 62023031 -41471943 + B4A SINE B4 138 292 0 3 1058 326 200 157 0 chr15 62023846 62023916 -41471058 - RSINE1 SINE B4 -83 82 2 4 1058 2174 261 68 63 chr15 62023916 62025244 -41469730 - L1MA6 LINE L1 -122 6178 4842 4 1058 520 246 68 15 chr15 62025252 62025384 -41469590 + B1F1 SINE Alu 10 148 -1 4 1058 180 0 0 0 chr15 62025384 62025404 -41469570 + (CCAA)n Simple_repeat Simple_repeat 4 23 0 4 1058 841 152 6 17 chr15 62025415 62025596 -41469378 + (CCAA)n Simple_repeat Simple_repeat 2 180 0 4 1058 342 91 0 0 chr15 62025616 62025671 -41469303 + (CAAG)n Simple_repeat Simple_repeat 1 55 0 4 1058 648 298 116 37 chr15 62025679 62026272 -41468702 - L1MA6 LINE L1 -1288 4855 4216 4 1058 2281 85 22 12 chr15 62026480 62026801 -41468173 - ORR1A3 LTR MaLR -2 324 1 4 1058 901 289 50 19 chr15 62027607 62027928 -41467046 + MER82 DNA MER2_type 13 343 -310 4 1058 432 313 143 0 chr15 62028133 62028315 -41466659 + ID_B1 SINE B4 5 212 -12 4 1058 877 318 36 33 chr15 62028428 62028757 -41466217 - MER58B DNA MER1_type -8 333 4 4 1058 1973 56 0 20 chr15 62029213 62029466 -41465508 + L1_Mus1 LINE L1 6320 6567 0 4 1058 318 355 56 8 chr15 62029502 62029627 -41465347 + B4 SINE B4 73 203 -89 5 1058 507 267 0 0 chr15 62029527 62029632 -41465342 + PB1D10 SINE Alu 13 117 0 5 1058 1222 91 11 22 chr15 62030704 62030884 -41464090 + B2_Mm1t SINE B2 2 179 -14 5 1058 331 137 37 21 chr15 62030936 62031043 -41463931 + B2_Mm2 SINE B2 47 191 -4 5 1058 253 360 29 29 chr15 62031889 62032029 -41462945 + MLT1E2 LTR MaLR 24 163 -464 5 1058 941 125 20 7 chr15 62032037 62032190 -41462784 - URR1A DNA MER1_type 0 226 72 5 1058 535 351 63 30 chr15 62032231 62032563 -41462411 + MLT1E2 LTR MaLR 171 513 -114 5 1058 393 22 0 0 chr15 62032591 62032637 -41462337 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1058 233 374 9 9 chr15 62033087 62033195 -41461779 - MIR SINE MIR -51 211 104 5 1058 291 313 82 73 chr15 62033362 62033595 -41461379 + ORR1E LTR MaLR 74 298 -76 5 1058 248 307 133 19 chr15 62033620 62033727 -41461247 - MIRb SINE MIR -57 151 37 5 1058 396 248 73 0 chr15 62035170 62035279 -41459695 + L1MA6 LINE L1 6119 6235 -65 6 1058 194 286 111 0 chr15 62035564 62035627 -41459347 + MIRc SINE MIR 133 202 -66 6 1058 181 363 29 19 chr15 62035838 62035942 -41459032 + MER5A DNA MER1_type 5 109 -80 6 1058 282 360 62 6 chr15 62037590 62037752 -41457222 - MIRb SINE MIR -62 206 36 6 1058 287 339 43 11 chr15 62038644 62038755 -41456219 + B1F1 SINE Alu 5 118 -2 6 1058 212 271 176 69 chr15 62038793 62038924 -41456050 - B1_Mur2 SINE Alu -1 148 4 6 1058 331 299 91 157 chr15 62038924 62039039 -41455935 - ID_B1 SINE B4 -121 103 3 6 1058 883 252 28 5 chr15 62040156 62040367 -41454607 - B3 SINE B2 0 216 1 6 1058 645 296 55 15 chr15 62041012 62041214 -41453760 + ID_B1 SINE B4 2 211 -13 6 1058 1069 138 77 0 chr15 62041230 62041411 -41453563 + B2_Mm2 SINE B2 1 195 0 6 1058 207 0 0 0 chr15 62042502 62042525 -41452449 + (TTG)n Simple_repeat Simple_repeat 2 24 0 7 1058 1224 35 7 0 chr15 62042525 62042667 -41452307 - B1_Mm SINE Alu -3 144 2 7 1058 543 69 0 0 chr15 62042753 62042825 -41452149 + (TG)n Simple_repeat Simple_repeat 2 73 0 7 1058 1260 231 107 24 chr15 62043260 62043597 -41451377 - ORR1D2 LTR MaLR -5 365 1 7 1058 238 284 45 89 chr15 62044260 62044372 -41450602 + MIRb SINE MIR 7 113 -155 7 1058 1137 314 143 4 chr15 62046651 62047182 -41447792 - Lx8 LINE L1 -85 7388 6784 7 1058 931 272 73 31 chr15 62047191 62047479 -41447495 - Lx8 LINE L1 -866 6607 6308 7 1058 487 281 23 63 chr15 62047576 62047793 -41447181 + MLT2D LTR ERVL 108 326 -71 7 1058 210 71 0 0 chr15 62049067 62049095 -41445879 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1058 252 122 0 0 chr15 62049118 62049159 -41445815 + (TTC)n Simple_repeat Simple_repeat 2 42 0 7 1058 366 123 0 0 chr15 62049388 62049445 -41445529 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1058 324 64 0 0 chr15 62051964 62052011 -41442963 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 1058 200 361 90 27 chr15 62052579 62052690 -41442284 + L2b LINE L2 3258 3375 0 8 1058 256 194 13 168 chr15 62053587 62053736 -41441238 + L1MA8 LINE L1 6160 6285 -6 8 1058 264 100 0 0 chr15 62054087 62054127 -41440847 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 8 1058 315 311 15 29 chr15 62054458 62054635 -41440339 + MIR SINE MIR 36 216 -52 8 1058 187 336 65 28 chr15 62055571 62055678 -41439296 + MIRc SINE MIR 85 195 -73 8 1058 514 315 106 22 chr15 62056476 62056927 -41438047 - L1M4c LINE L1 -4612 1772 1284 8 1058 328 276 90 6 chr15 62056926 62057164 -41437810 - L1M3e LINE L1 -4650 2377 2105 8 1058 376 325 154 16 chr15 62057476 62057795 -41437179 - L1M3e LINE L1 -6666 364 2 8 1058 13048 23 0 0 chr15 62057837 62060003 -41434971 - L1Md_T LINE L1 0 6582 4417 8 1058 1863 92 0 40 chr15 62059999 62060303 -41434671 - L1Md_Gf LINE L1 -6165 357 66 8 1058 185 379 40 35 chr15 62060359 62060586 -41434388 - MIR SINE MIR -29 233 6 9 1058 197 241 167 12 chr15 62060701 62060785 -41434189 + MIRb SINE MIR 34 130 -138 9 1058 438 289 45 45 chr15 62061866 62062000 -41432974 - MTE2b LTR MaLR 0 379 246 9 1058 506 329 47 0 chr15 62062028 62062198 -41432776 - MTE2b LTR MaLR -201 178 1 9 1058 650 284 13 0 chr15 62062665 62062820 -41432154 - ID_B1 SINE B4 -66 158 2 9 1058 433 299 15 66 chr15 62062827 62063024 -41431950 - MLT1E2 LTR MaLR -440 187 1 9 1058 286 273 8 40 chr15 62064018 62064077 -41430897 + (TATATG)n Simple_repeat Simple_repeat 1 57 0 9 1058 203 88 29 0 chr15 62064077 62064111 -41430863 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 1058 286 273 8 40 chr15 62064111 62064177 -41430797 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 9 1058 687 218 228 40 chr15 62065851 62066123 -41428851 + MTD LTR MaLR 81 403 -16 9 1058 667 0 12 12 chr15 62066270 62066354 -41428620 + (TCTA)n Simple_repeat Simple_repeat 4 87 0 9 1058 406 281 107 0 chr15 62066764 62066885 -41428089 - ID_B1 SINE B4 -3 221 88 1 1058 890 236 62 0 chr15 62067366 62067574 -41427400 + ID_B1 SINE B4 1 221 -3 1 1058 254 163 0 0 chr15 62067981 62068024 -41426950 - L1MB7 LINE L1 -10 6174 6132 1 1058 360 88 0 0 chr15 62069483 62069540 -41425434 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1058 496 274 157 51 chr15 62069587 62069957 -41425017 + L1MA8 LINE L1 5882 6290 -1 1 1058 476 316 94 30 chr15 62070008 62070210 -41424764 + ID_B1 SINE B4 10 224 0 1 1058 269 271 0 0 chr15 62070930 62070989 -41423985 + MTEa LTR MaLR 13 71 -308 1 1058 281 239 92 50 chr15 62071281 62071400 -41423574 - Lx8 LINE L1 -292 7181 7058 1 1058 328 322 17 9 chr15 62071724 62071840 -41423134 - L1M5 LINE L1 -592 5602 5486 1 1058 461 17 0 17 chr15 62072168 62072227 -41422747 + (TAAA)n Simple_repeat Simple_repeat 2 59 0 1 1058 215 324 167 35 chr15 62072920 62073064 -41421910 + MIR SINE MIR 56 218 -44 1 1058 235 309 48 24 chr15 62073075 62073201 -41421773 - MIRb SINE MIR -103 165 37 1 1058 444 37 0 0 chr15 62073313 62073367 -41421607 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1058 183 341 12 12 chr15 62073719 62073805 -41421169 - MIR SINE MIR -121 141 56 1 1058 200 200 25 0 chr15 62074819 62074859 -41420115 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1058 1973 322 122 45 chr15 62075510 62075967 -41419007 - Lx8 LINE L1 -192 7281 6815 1 1058 372 22 0 0 chr15 62075967 62076012 -41418962 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1058 1973 322 122 45 chr15 62076012 62076846 -41418128 - Lx8 LINE L1 -659 6814 5891 1 1058 397 283 9 0 chr15 62077583 62077689 -41417285 + PB1D10 SINE Alu 3 109 -8 1 1058 483 18 0 0 chr15 62078108 62078164 -41416810 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1058 530 221 165 0 chr15 62079182 62079309 -41415665 + B1_Mus1 SINE Alu 1 148 0 1 1058 180 0 0 0 chr15 62079314 62079334 -41415640 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1 1058 841 309 57 21 chr15 62079393 62079776 -41415198 - L1MC2 LINE L1 -118 6226 5830 1 1058 291 350 29 59 chr15 62080003 62080173 -41414801 + ID_B1 SINE B4 5 169 -55 1 1058 21 0 0 0 chr15 62080337 62080358 -41414616 + AT_rich Low_complexity Low_complexity 1 21 0 1 1058 510 277 108 0 chr15 62080473 62080603 -41414371 - RSINE1 SINE B4 -17 148 5 1 1058 432 312 101 28 chr15 62080708 62080955 -41414019 + MLT1L LTR MaLR 344 608 -2 1 1058 206 363 108 19 chr15 62081925 62082330 -41412644 + L2a LINE L2 2738 3186 -240 1 1058 364 311 61 18 chr15 62083014 62083178 -41411796 + MLT1F LTR MaLR 364 534 -14 1 1058 234 0 0 0 chr15 62083977 62084003 -41410971 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1058 1501 73 21 0 chr15 62084003 62084194 -41410780 - B2_Mm2 SINE B2 0 195 1 1 1058 1136 68 0 33 chr15 62084472 62084623 -41410351 - B1_Mm SINE Alu 0 147 2 1 1058 527 278 52 13 chr15 62085264 62085493 -41409481 - L1MA6 LINE L1 -16 6284 6053 1 1058 661 244 132 20 chr15 62085493 62085744 -41409230 + L1MA6 LINE L1 5766 6044 -256 1 1058 318 363 38 38 chr15 62086640 62086852 -41408122 - MTEa LTR MaLR -116 263 52 1 1058 288 202 87 0 chr15 62086932 62087022 -41407952 - L1M2 LINE L1 -3407 2739 2644 1 1058 495 0 0 0 chr15 62087131 62087186 -41407788 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 1058 795 231 164 30 chr15 62087789 62088084 -41406890 + ORR1E LTR MaLR 25 382 -2 1 1058 378 310 81 89 chr15 62088101 62088448 -41406526 + ORR1E LTR MaLR 1 344 -15 1 1058 291 258 101 50 chr15 62089225 62089364 -41405610 - L1MA5 LINE L1 -19 6281 6136 1 1058 1153 247 107 23 chr15 62090198 62090583 -41404391 + MTD LTR MaLR 3 419 0 1 1058 345 294 34 27 chr15 62091623 62091770 -41403204 + MER58B DNA MER1_type 177 324 -17 1 1058 1347 99 5 14 chr15 62093674 62093888 -41401086 + Lx2 LINE L1 6786 6997 0 1 1058 215 284 13 13 chr15 62093958 62094115 -41400859 + CT-rich Low_complexity Low_complexity 3 159 0 1 1058 189 224 119 0 chr15 62094503 62094570 -41400404 - L2 LINE L2 -601 2818 2744 1 1058 307 354 57 0 chr15 62095216 62095391 -41399583 + L2 LINE L2 2634 2818 -601 1 1058 198 0 0 0 chr15 62095948 62095970 -41399004 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1058 257 269 111 37 chr15 62096595 62096703 -41398271 - MTEa LTR MaLR -263 116 1 1 1058 195 69 0 0 chr15 62097469 62097498 -41397476 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1058 206 352 48 0 chr15 62097859 62097964 -41397010 - MIRb SINE MIR -122 146 37 1 1058 2758 66 0 11 chr15 62098753 62099107 -41395867 + L1_Mus1 LINE L1 6217 6566 -1 1 1058 234 176 0 0 chr15 62100166 62100217 -41394757 + CT-rich Low_complexity Low_complexity 2 52 0 1 1058 1126 102 11 0 chr15 62100226 62100402 -41394572 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 1 1058 612 73 0 0 chr15 62100418 62100500 -41394474 + (TTTC)n Simple_repeat Simple_repeat 1 82 0 1 1058 1180 256 43 13 chr15 62100589 62100870 -41394104 - ORR1D2 LTR MaLR -56 314 24 1 1058 414 0 0 0 chr15 62100870 62100916 -41394058 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1058 198 0 0 0 chr15 62100916 62100937 -41394037 + (GA)n Simple_repeat Simple_repeat 1 22 0 1 1058 1180 256 43 13 chr15 62100937 62100959 -41394015 - ORR1D2 LTR MaLR -347 23 2 1 1058 2071 239 8 67 chr15 62101486 62101997 -41392977 - Lx6 LINE L1 -29 7431 6951 1 1058 934 326 94 41 chr15 62102538 62102668 -41392306 - L1ME2 LINE L1 -46 6118 5997 1 1058 285 51 0 0 chr15 62102668 62102707 -41392267 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1058 1125 65 0 0 chr15 62102707 62102845 -41392129 - B1_Mm SINE Alu -9 138 1 1 1058 934 326 94 41 chr15 62102845 62103395 -41391579 - L1ME2 LINE L1 -168 5996 5402 1 1058 253 295 38 25 chr15 62104175 62104255 -41390719 - RMER30 DNA MER1_type -120 82 2 1 1058 336 321 53 15 chr15 62104495 62104628 -41390346 - MIRb SINE MIR -129 139 2 1 1058 309 318 9 0 chr15 62105382 62105489 -41389485 - MER5A DNA MER1_type -81 108 1 1 1058 308 275 35 48 chr15 62105671 62105816 -41389158 - MLT1J1 LTR MaLR -239 205 63 1 1058 783 170 69 52 chr15 62106048 62106222 -41388752 + URR1B DNA MER1_type 49 225 0 1 1058 1957 114 58 61 chr15 62106447 62106775 -41388199 - ORR1A2 LTR MaLR 0 327 1 1 1058 1418 35 3 0 chr15 62108447 62108733 -41386241 + (TTC)n Simple_repeat Simple_repeat 1 287 0 1 1058 225 0 0 0 chr15 62108771 62108796 -41386178 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 1058 294 29 0 0 chr15 62108798 62108833 -41386141 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 1058 2036 197 5 17 chr15 62109105 62109523 -41385451 + MTC LTR MaLR 1 413 -8 1 1058 4982 183 34 5 chr15 62109526 62110486 -41384488 + MTC-int LTR MaLR 2 989 -269 1 1058 600 14 0 0 chr15 62110620 62110689 -41384285 + (TCC)n Simple_repeat Simple_repeat 1 69 0 1 1058 273 276 98 67 chr15 62111853 62112047 -41382927 + MLT1H LTR MaLR 350 549 0 1 1058 2257 166 0 10 chr15 62112882 62113272 -41381702 - ORR1B1 LTR MaLR -8 386 1 1 1058 239 311 67 24 chr15 62113473 62113638 -41381336 + MIR SINE MIR 84 255 -7 1 1058 197 114 0 54 chr15 62113605 62113642 -41381332 + L2c LINE L2 3342 3376 -11 1 1058 426 300 189 7 chr15 62113715 62114000 -41380974 + MLT1F1 LTR MaLR 198 534 -35 1 1058 532 329 118 15 chr15 62114102 62114432 -41380542 - Tigger7 DNA MER2_type -2107 384 21 1 1058 429 70 0 0 chr15 62114520 62114577 -41380397 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 1058 270 0 0 0 chr15 62114908 62114938 -41380036 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1058 322 346 22 0 chr15 62115150 62115286 -41379688 + CT-rich Low_complexity Low_complexity 5 143 0 1 1058 281 299 34 93 chr15 62115877 62115995 -41378979 - PB1D10 SINE Alu -1 116 6 1 1058 417 123 0 0 chr15 62116590 62116655 -41378319 + (GGGA)n Simple_repeat Simple_repeat 4 68 0 1 1058 207 352 96 27 chr15 62118169 62118315 -41376659 - MIRc SINE MIR -61 207 52 1 1058 261 0 0 0 chr15 62118672 62118701 -41376273 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1058 22 56 0 0 chr15 62119630 62119666 -41375308 + AT_rich Low_complexity Low_complexity 1 36 0 1 1058 342 289 21 0 chr15 62119732 62119829 -41375145 - B3A SINE B2 -99 99 1 1 1058 240 337 0 10 chr15 62120284 62120386 -41374588 + CT-rich Low_complexity Low_complexity 3 103 0 1 1058 316 190 0 25 chr15 62120474 62120555 -41374419 + CT-rich Low_complexity Low_complexity 2 80 0 1 1058 279 281 22 0 chr15 62120804 62120893 -41374081 + MLT1K LTR MaLR 501 591 -4 1 1058 366 326 27 20 chr15 62123006 62123153 -41371821 - B4 SINE B4 -79 213 66 1 1058 306 0 0 0 chr15 62123734 62123768 -41371206 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 1 1058 223 316 43 17 chr15 62125027 62125143 -41369831 - MIR SINE MIR -31 231 113 1 1058 870 135 0 0 chr15 62125954 62126095 -41368879 + (TCC)n Simple_repeat Simple_repeat 2 142 0 1 1058 185 288 158 16 chr15 62127415 62127542 -41367432 + MIRb SINE MIR 116 260 -8 1 1058 22 0 0 0 chr15 62127596 62127618 -41367356 + AT_rich Low_complexity Low_complexity 1 22 0 1 1058 344 77 19 0 chr15 62127626 62127678 -41367296 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1058 557 285 0 0 chr15 62127690 62127813 -41367161 - RSINE1 SINE B4 -22 143 21 1 1059 270 344 11 0 chr15 62129533 62129626 -41365348 + (TG)n Simple_repeat Simple_repeat 1 94 0 1 1059 618 321 77 27 chr15 62129655 62129876 -41365098 - B4A SINE B4 -55 237 6 1 1059 282 320 24 0 chr15 62130614 62130739 -41364235 + Charlie4a DNA MER1_type 378 505 -3 1 1059 198 0 0 0 chr15 62130804 62130826 -41364148 + (CAAAAA)n Simple_repeat Simple_repeat 6 27 0 1 1059 246 105 0 0 chr15 62131283 62131321 -41363653 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2 1059 396 0 0 0 chr15 62131374 62131418 -41363556 + (TTTC)n Simple_repeat Simple_repeat 2 45 0 2 1059 5201 115 26 17 chr15 62131433 62132214 -41362760 - Lx LINE L1 -26 6628 5841 2 1059 767 98 14 27 chr15 62132491 62132638 -41362336 + (TCTA)n Simple_repeat Simple_repeat 2 146 0 2 1059 186 349 0 0 chr15 62133835 62133898 -41361076 - L2 LINE L2 -576 2843 2781 2 1059 183 42 0 0 chr15 62136120 62136144 -41358830 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 1059 213 338 95 0 chr15 62136487 62136561 -41358413 - L2b LINE L2 -43 3332 3252 2 1059 8248 63 9 8 chr15 62136581 62137752 -41357222 + L1_Mus3 LINE L1 5465 6637 -1 2 1059 196 353 28 38 chr15 62138271 62138377 -41356597 - L2b LINE L2 -267 3159 3055 2 1059 1127 254 92 9 chr15 62138841 62139187 -41355787 - MLT1B LTR MaLR -2 388 14 2 1059 276 53 0 0 chr15 62139407 62139445 -41355529 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 2 1059 672 277 75 25 chr15 62140201 62140401 -41354573 + ID_B1 SINE B4 11 220 -4 2 1059 221 0 0 33 chr15 62140457 62140487 -41354487 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1059 448 178 9 38 chr15 62142726 62142831 -41352143 - Lx4A LINE L1 -31 7027 6926 2 1059 356 277 100 8 chr15 62143020 62143140 -41351834 - L1MA10 LINE L1 -38 6296 6166 2 1059 238 278 52 0 chr15 62143226 62143323 -41351651 - L1MD LINE L1 -2152 5843 5742 2 1059 627 300 74 0 chr15 62143602 62143845 -41351129 - Charlie10 DNA MER1_type -532 2290 2030 2 1059 314 274 198 15 chr15 62143972 62144176 -41350798 - L1M5 LINE L1 -491 5688 5448 2 1059 227 258 0 0 chr15 62144297 62144359 -41350615 - L1MEc LINE L1 -6145 255 194 2 1059 1228 103 69 0 chr15 62144405 62144580 -41350394 + B2_Mm2 SINE B2 2 188 -7 2 1059 22 0 0 0 chr15 62145373 62145395 -41349579 + AT_rich Low_complexity Low_complexity 1 22 0 2 1059 777 263 25 29 chr15 62145404 62145606 -41349368 - B3 SINE B2 0 216 16 2 1059 970 143 6 23 chr15 62145606 62145778 -41349196 - URR1A DNA MER1_type 0 226 58 2 1059 369 296 48 42 chr15 62145826 62145992 -41348982 - MLT1J1 LTR MaLR -260 184 18 2 1059 591 279 26 14 chr15 62146963 62147172 -41347802 + B3A SINE B2 5 215 -1 2 1059 7750 52 8 5 chr15 62147608 62148877 -41346097 - L1Md_F2 LINE L1 -14 6568 5294 2 1059 526 107 0 82 chr15 62148877 62148999 -41345975 - L1Md_F2 LINE L1 0 6582 6471 2 1059 8766 22 6 4 chr15 62149024 62150072 -41344902 - L1Md_A LINE L1 0 6582 5237 2 1059 591 350 90 70 chr15 62150701 62151030 -41343944 - MLT1G LTR MaLR -28 563 214 2 1059 323 313 0 0 chr15 62151030 62151113 -41343861 - ID4 SINE ID 0 83 1 2 1059 591 350 90 70 chr15 62151113 62151326 -41343648 - MLT1G LTR MaLR -378 213 10 2 1059 246 374 14 14 chr15 62151443 62151584 -41343390 - MIR SINE MIR -33 235 88 2 1059 180 369 80 24 chr15 62151690 62151815 -41343159 - MIRb SINE MIR -44 224 93 2 1059 220 264 16 0 chr15 62152022 62152147 -41342827 + (TG)n Simple_repeat Simple_repeat 1 127 0 2 1059 289 252 55 22 chr15 62152840 62152962 -41342012 + MIR SINE MIR 20 151 -125 2 1059 449 273 44 44 chr15 62153793 62153996 -41340978 + MIRc SINE MIR 66 268 0 2 1059 713 221 0 0 chr15 62155353 62155493 -41339481 - B1_Mus2 SINE Alu -5 142 3 2 1059 221 151 0 19 chr15 62155562 62155593 -41339381 + polypurine Low_complexity Low_complexity 1 31 0 2 1059 183 42 0 0 chr15 62155593 62155617 -41339357 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 1059 221 151 0 19 chr15 62155617 62155639 -41339335 + polypurine Low_complexity Low_complexity 32 53 0 2 1059 1061 319 0 0 chr15 62155647 62155895 -41339079 - B4A SINE B4 -42 250 3 2 1059 999 184 119 0 chr15 62156234 62156435 -41338539 - URR1A DNA MER1_type 0 226 2 2 1059 191 289 0 19 chr15 62156973 62157026 -41337948 + MIR SINE MIR 3 54 -208 2 1059 229 266 0 30 chr15 62157828 62157894 -41337080 + CT-rich Low_complexity Low_complexity 3 66 0 2 1059 398 328 14 14 chr15 62158048 62158187 -41336787 - B4A SINE B4 -151 141 3 2 1059 386 221 0 13 chr15 62158273 62158351 -41336623 + B4A SINE B4 193 269 -23 2 1059 297 318 124 30 chr15 62158348 62158549 -41336425 + MTE2a LTR MaLR 119 338 -41 2 1059 470 237 0 19 chr15 62159482 62159523 -41335451 + polypyrimidine Low_complexity Low_complexity 114 154 0 2 1059 800 54 27 0 chr15 62159523 62159635 -41335339 + (TTTTC)n Simple_repeat Simple_repeat 5 119 0 2 1059 470 237 0 19 chr15 62159635 62159748 -41335226 + CT-rich Low_complexity Low_complexity 3 113 0 2 1059 609 52 0 0 chr15 62160451 62160528 -41334446 + (GAAA)n Simple_repeat Simple_repeat 1 77 0 2 1059 426 96 0 0 chr15 62161202 62161275 -41333699 + (TC)n Simple_repeat Simple_repeat 2 74 0 2 1059 288 0 0 0 chr15 62161275 62161307 -41333667 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1059 181 156 0 0 chr15 62161579 62161611 -41333363 + MIR SINE MIR 217 248 -14 2 1059 213 65 0 0 chr15 62161629 62161660 -41333314 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 2 1059 300 235 0 0 chr15 62161772 62161912 -41333062 + (CA)n Simple_repeat Simple_repeat 1 140 0 2 1059 402 321 0 0 chr15 62162351 62162463 -41332511 + ID_B1 SINE B4 87 198 -26 2 1059 201 108 0 0 chr15 62162586 62162623 -41332351 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 2 1059 300 294 11 11 chr15 62163134 62163227 -41331747 + Charlie9 DNA MER1_type 9 101 -2656 2 1059 300 351 176 0 chr15 62164027 62164232 -41330742 + MLT1H LTR MaLR 102 342 -207 2 1059 783 31 0 0 chr15 62164465 62164563 -41330411 + (TC)n Simple_repeat Simple_repeat 1 98 0 2 1059 2127 61 0 48 chr15 62165230 62165523 -41329451 - L1_Mus1 LINE L1 0 6567 6289 2 1059 216 97 0 0 chr15 62167128 62167159 -41327815 + (TC)n Simple_repeat Simple_repeat 1 31 0 2 1059 213 362 0 0 chr15 62167383 62167441 -41327533 + polypyrimidine Low_complexity Low_complexity 2 59 0 2 1059 257 51 0 25 chr15 62167463 62167503 -41327471 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1059 324 247 0 0 chr15 62169076 62169161 -41325813 + (CTA)n Simple_repeat Simple_repeat 2 86 0 2 1059 592 283 52 19 chr15 62169193 62169348 -41325626 - RSINE1 SINE B4 -2 163 4 2 1059 297 291 67 25 chr15 62169450 62169570 -41325404 - MIRb SINE MIR -21 247 123 2 1059 260 238 76 45 chr15 62169570 62169636 -41325338 - ID4 SINE ID -14 69 2 2 1059 744 331 0 0 chr15 62169756 62169928 -41325046 - B3A SINE B2 -18 180 9 2 1059 225 256 0 0 chr15 62169951 62169994 -41324980 - PB1 SINE Alu -64 63 21 2 1059 1029 181 40 10 chr15 62170097 62170298 -41324676 + Lx4A LINE L1 6849 7055 -3 2 1059 313 343 22 36 chr15 62170466 62170605 -41324369 - ID_B1 SINE B4 -2 222 86 2 1059 1106 79 0 24 chr15 62170765 62170933 -41324041 + L1Md_F2 LINE L1 6405 6568 -14 2 1059 265 294 110 47 chr15 62172750 62172895 -41322079 - MTEa LTR MaLR -1 420 215 2 1059 425 19 19 0 chr15 62172895 62172949 -41322025 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 2 1059 265 346 113 110 chr15 62172949 62172986 -41321988 - MTEa LTR MaLR -165 214 194 2 1059 933 50 0 0 chr15 62172986 62173107 -41321867 - L1_Mus2 LINE L1 0 6566 6446 2 1059 265 346 113 110 chr15 62173107 62173284 -41321690 - MTEa LTR MaLR -186 193 12 2 1059 529 211 133 70 chr15 62173310 62173468 -41321506 + ID_B1 SINE B4 1 168 -56 2 1059 220 345 54 9 chr15 62173607 62173718 -41321256 + L2c LINE L2 2547 2662 -757 2 1059 3569 42 16 0 chr15 62173751 62174185 -41320789 - L1Md_F2 LINE L1 -1 6581 6141 2 1059 2072 131 0 71 chr15 62174704 62175058 -41319916 - ORR1A4 LTR MaLR 0 329 1 2 1059 232 250 0 0 chr15 62175581 62175637 -41319337 + (ATG)n Simple_repeat Simple_repeat 1 56 0 2 1059 262 229 100 45 chr15 62176125 62176235 -41318739 + MIRb SINE MIR 119 234 -34 2 1059 1285 107 0 36 chr15 62176279 62176473 -41318501 + B2_Mm2 SINE B2 1 187 -8 2 1059 199 327 9 71 chr15 62176548 62176660 -41318314 + L2c LINE L2 3283 3387 0 2 1059 1567 293 65 35 chr15 62178309 62179205 -41315769 + Lx6 LINE L1 6250 7395 -65 2 1059 185 282 99 0 chr15 62179319 62179390 -41315584 - MIRb SINE MIR -150 118 41 2 1059 196 206 0 0 chr15 62179747 62179781 -41315193 + MIRc SINE MIR 88 121 -147 2 1059 187 392 40 32 chr15 62180172 62180296 -41314678 - MIRb SINE MIR -16 252 128 2 1059 519 284 26 157 chr15 62180719 62180949 -41314025 - MTEb LTR MaLR -178 201 2 2 1059 522 46 0 0 chr15 62181239 62181304 -41313670 + (GA)n Simple_repeat Simple_repeat 2 66 0 2 1059 262 243 43 0 chr15 62181313 62181383 -41313591 + Lx7 LINE L1 7039 7111 -585 2 1059 248 163 20 0 chr15 62181361 62181410 -41313564 + Lx8 LINE L1 7102 7151 -322 2 1059 390 252 1 13 chr15 62181423 62181523 -41313451 - B4 SINE B4 -191 101 3 2 1059 358 276 38 9 chr15 62181617 62181723 -41313251 + MIRc SINE MIR 49 157 -111 2 1059 774 324 52 40 chr15 62182560 62182932 -41312042 - LTR16B LTR ERVL -45 418 8 2 1059 189 175 0 0 chr15 62182981 62183021 -41311953 + A-rich Low_complexity Low_complexity 1 40 0 2 1059 649 85 9 9 chr15 62183357 62183464 -41311510 + (TCTA)n Simple_repeat Simple_repeat 1 107 0 2 1059 291 340 52 95 chr15 62184587 62184818 -41310156 + MER46C DNA MER2_type 80 300 -38 2 1059 334 364 18 6 chr15 62185509 62185675 -41309299 + MIRb SINE MIR 85 252 -16 2 1059 6444 144 93 9 chr15 62186128 62187415 -41307559 - L1_Mus4 LINE L1 0 5883 4489 2 1059 5465 91 0 3 chr15 62187415 62188157 -41306817 + L1_Mus4 LINE L1 5896 6635 -1 2 1059 206 0 69 0 chr15 62188241 62188270 -41306704 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1059 753 324 83 10 chr15 62188648 62188960 -41306014 - MER58B DNA MER1_type -3 338 4 2 1059 1042 301 47 18 chr15 62188999 62189341 -41305633 - ORR1E LTR MaLR 0 359 8 3 1059 2286 65 10 0 chr15 62189378 62189688 -41305286 - L1Md_F2 LINE L1 -167 6415 6103 3 1059 1290 48 0 0 chr15 62189688 62189855 -41305119 + L1Md_F2 LINE L1 6402 6568 -14 3 1059 198 0 0 0 chr15 62190281 62190303 -41304671 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1059 26 0 0 0 chr15 62191651 62191677 -41303297 + AT_rich Low_complexity Low_complexity 1 26 0 3 1059 216 0 0 0 chr15 62191768 62191792 -41303182 + (TC)n Simple_repeat Simple_repeat 1 24 0 3 1059 198 0 0 0 chr15 62191792 62191813 -41303161 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 1059 467 271 65 27 chr15 62192133 62192319 -41302655 + L1MA4 LINE L1 5716 5908 -392 3 1059 1342 301 112 13 chr15 62192698 62193254 -41301720 - Lx8 LINE L1 -99 7374 6764 3 1059 187 343 108 36 chr15 62193462 62193601 -41301373 + L2c LINE L2 3228 3376 -11 3 1059 233 304 174 0 chr15 62193513 62193605 -41301369 + MIRm SINE MIR 164 271 -5 3 1059 2418 74 0 0 chr15 62194238 62194550 -41300424 + L1_Mus2 LINE L1 6255 6566 0 3 1059 329 161 22 22 chr15 62194781 62194870 -41300104 + CT-rich Low_complexity Low_complexity 2 90 0 3 1059 1470 141 5 0 chr15 62194999 62195219 -41299755 + URR1B DNA MER1_type 5 225 0 3 1059 195 232 53 18 chr15 62195332 62195389 -41299585 - MIRb SINE MIR -85 183 125 3 1059 542 296 96 6 chr15 62195412 62195589 -41299385 + B4A SINE B4 42 234 -58 3 1059 21 0 0 0 chr15 62196150 62196171 -41298803 + AT_rich Low_complexity Low_complexity 1 21 0 3 1059 1703 157 141 6 chr15 62196411 62196751 -41298223 + ORR1B1 LTR MaLR 1 386 -8 3 1059 1124 88 22 11 chr15 62196891 62197074 -41297900 - L1_Mus3 LINE L1 -2 6636 6452 3 1059 1859 179 16 64 chr15 62197113 62197489 -41297485 - ORR1B2 LTR MaLR -9 358 1 3 1059 23 0 0 0 chr15 62197584 62197607 -41297367 + AT_rich Low_complexity Low_complexity 1 23 0 3 1059 287 365 63 13 chr15 62197954 62198112 -41296862 - MIR SINE MIR -77 185 20 3 1059 14477 57 0 4 chr15 62199007 62201638 -41293336 - L1Md_F2 LINE L1 -12 6570 3951 3 1059 794 81 0 18 chr15 62201698 62201811 -41293163 - B1_Mus1 SINE Alu -1 147 37 3 1059 759 257 88 5 chr15 62202401 62202616 -41292358 - Tigger5 DNA MER2_type -6 2400 2168 3 1059 263 164 0 35 chr15 62203346 62203403 -41291571 + MIRc SINE MIR 107 161 -107 3 1059 795 287 0 17 chr15 62204096 62204273 -41290701 + B3A SINE B2 1 174 -24 3 1059 1537 52 0 5 chr15 62204616 62204808 -41290166 - B2_Mm2 SINE B2 -2 193 3 3 1059 278 370 51 0 chr15 62204983 62205121 -41289853 + MIRc SINE MIR 110 254 -14 3 1059 563 362 104 11 chr15 62205234 62205782 -41289192 - L2 LINE L2 -471 2948 2350 3 1059 513 80 0 0 chr15 62205859 62205934 -41289040 + (TTTA)n Simple_repeat Simple_repeat 1 75 0 3 1059 307 275 169 37 chr15 62205954 62206090 -41288884 - RSINE1 SINE B4 -9 156 3 3 1059 1332 228 136 17 chr15 62207976 62208328 -41286646 + MTD LTR MaLR 18 411 -8 3 1059 474 151 0 0 chr15 62208331 62208404 -41286570 - Lx2 LINE L1 -430 6567 6495 3 1059 398 92 15 0 chr15 62208398 62208463 -41286511 + Lx2 LINE L1 6578 6643 -354 3 1059 1203 126 39 82 chr15 62208463 62208696 -41286278 + Lx2 LINE L1 6775 6997 0 3 1059 2527 86 3 0 chr15 62208704 62209065 -41285909 - L1_Mus4 LINE L1 -426 6210 5849 3 1059 2775 99 2 12 chr15 62209065 62209482 -41285492 + L1_Mus4 LINE L1 6224 6636 0 3 1059 681 281 69 73 chr15 62209641 62209902 -41285072 + MER2 DNA MER2_type 86 345 0 3 1059 494 357 19 5 chr15 62210916 62211130 -41283844 - MIR SINE MIR 0 262 46 3 1059 302 333 104 0 chr15 62211223 62211367 -41283607 - MIRc SINE MIR -50 218 60 3 1059 2442 137 15 13 chr15 62212502 62212895 -41282079 - ORR1B1 LTR MaLR 0 394 1 3 1059 1186 68 7 0 chr15 62212932 62213079 -41281895 - B1_Mus1 SINE Alu 0 148 1 3 1059 232 331 107 8 chr15 62213197 62213328 -41281646 + MLT1F2 LTR MaLR 138 281 -279 3 1059 1674 266 14 22 chr15 62214406 62214855 -41280119 + Lx5 LINE L1 6276 6887 -573 3 1059 495 0 0 0 chr15 62214855 62214910 -41280064 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1059 1674 282 23 63 chr15 62214910 62215337 -41279637 + Lx5 LINE L1 6632 7032 -18 3 1059 656 239 65 107 chr15 62215419 62215736 -41279238 - L1MB2 LINE L1 -66 6117 5815 3 1059 263 301 37 46 chr15 62216117 62216225 -41278749 + PB1D9 SINE Alu 14 120 0 3 1059 324 0 0 0 chr15 62216926 62216962 -41278012 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 3 1059 216 0 0 0 chr15 62217288 62217312 -41277662 + (TGG)n Simple_repeat Simple_repeat 2 25 0 3 1059 5532 162 42 23 chr15 62217450 62218075 -41276899 + Lx3C LINE L1 5871 6486 -490 3 1059 261 0 0 0 chr15 62218075 62218104 -41276870 + (CTGTG)n Simple_repeat Simple_repeat 4 32 0 3 1059 5532 162 42 23 chr15 62218104 62218562 -41276412 + Lx3C LINE L1 6487 6974 -2 3 1059 26 50 0 0 chr15 62218991 62219031 -41275943 + AT_rich Low_complexity Low_complexity 1 40 0 3 1059 725 281 75 53 chr15 62219612 62219894 -41275080 + B4 SINE B4 1 288 -4 3 1059 442 324 85 6 chr15 62220206 62220383 -41274591 - MIR SINE MIR -68 194 4 3 1059 531 0 0 0 chr15 62220452 62220511 -41274463 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 1059 360 97 0 0 chr15 62220935 62220997 -41273977 + (A)n Simple_repeat Simple_repeat 1 62 0 3 1059 514 257 0 7 chr15 62222979 62223128 -41271846 + HAL1-2a_MD LINE L1 2338 2485 -539 3 1059 264 258 129 57 chr15 62224407 62224547 -41270427 + LTR33B LTR ERVL 325 474 -29 3 1059 234 113 84 0 chr15 62224734 62224805 -41270169 + (CAGA)n Simple_repeat Simple_repeat 4 80 0 3 1059 262 313 72 0 chr15 62224835 62224918 -41270056 + B1_Mur1 SINE Alu 57 145 -4 3 1059 360 248 14 0 chr15 62224923 62225012 -41269962 + ID4_ SINE ID 10 99 -53 3 1059 288 258 0 0 chr15 62225430 62225527 -41269447 + (TATG)n Simple_repeat Simple_repeat 2 98 0 3 1059 348 286 126 26 chr15 62225548 62225699 -41269275 - MER58B DNA MER1_type 0 341 176 3 1059 450 0 0 0 chr15 62226214 62226264 -41268710 + (TTTA)n Simple_repeat Simple_repeat 1 50 0 3 1059 22 0 0 0 chr15 62226520 62226542 -41268432 + AT_rich Low_complexity Low_complexity 1 22 0 3 1059 393 22 0 0 chr15 62226574 62226620 -41268354 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1059 250 290 73 0 chr15 62226663 62226787 -41268187 - Lx6 LINE L1 -9 7451 7319 3 1059 411 21 0 0 chr15 62226803 62226851 -41268123 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1059 399 331 121 48 chr15 62226859 62227173 -41267801 - ORR1E LTR MaLR -20 339 3 3 1059 616 303 50 19 chr15 62227268 62227645 -41267329 - L1MB2 LINE L1 -48 6123 5735 3 1059 505 217 120 17 chr15 62227709 62227826 -41267148 - B1F1 SINE Alu -17 132 4 3 1059 245 298 20 3 chr15 62228174 62228272 -41266702 + MIRc SINE MIR 61 160 -116 3 1059 221 354 164 44 chr15 62229681 62229974 -41265000 - L3 LINE CR1 -13 4476 4149 3 1059 1114 189 28 5 chr15 62230708 62230926 -41264048 - URR1A DNA MER1_type 0 226 4 3 1059 965 122 0 6 chr15 62231608 62231765 -41263209 + (TTC)n Simple_repeat Simple_repeat 1 156 0 3 1059 903 115 1 1 chr15 62231870 62232031 -41262943 - L1_Mm LINE L1 -3912 1971 1811 3 1059 576 0 0 0 chr15 62232291 62232355 -41262619 + (GA)n Simple_repeat Simple_repeat 1 64 0 3 1059 350 336 61 60 chr15 62232679 62233039 -41261935 + L2b LINE L2 2924 3292 -95 3 1059 354 127 0 0 chr15 62233039 62233110 -41261864 + (TTTTG)n Simple_repeat Simple_repeat 1 71 0 3 1059 1018 129 0 7 chr15 62233110 62233258 -41261716 - B1_Mus1 SINE Alu 0 148 2 3 1059 287 307 130 27 chr15 62234664 62234848 -41260126 + MIRc SINE MIR 2 204 -64 3 1059 603 40 0 0 chr15 62236434 62236508 -41258466 + (GA)n Simple_repeat Simple_repeat 1 74 0 3 1059 219 302 153 37 chr15 62236734 62236923 -41258051 + MIRb SINE MIR 41 251 -17 3 1059 2145 118 0 25 chr15 62238246 62238569 -41256405 - ORR1A2 LTR MaLR -1 326 12 3 1059 404 125 28 0 chr15 62239119 62239191 -41255783 + G-rich Low_complexity Low_complexity 1 74 0 3 1059 227 290 42 31 chr15 62239321 62239417 -41255557 - L3 LINE CR1 -682 3807 3711 3 1059 22 0 0 0 chr15 62239821 62239843 -41255131 + AT_rich Low_complexity Low_complexity 1 22 0 3 1059 248 245 152 10 chr15 62239886 62239985 -41254989 + L3 LINE CR1 3676 3788 -701 3 1059 736 311 0 5 chr15 62240433 62240617 -41254357 - MER58B DNA MER1_type 0 341 159 3 1059 551 241 81 14 chr15 62240772 62241099 -41253875 + L1M4 LINE L1 5211 5556 -608 3 1059 185 154 26 0 chr15 62241157 62241196 -41253778 + CT-rich Low_complexity Low_complexity 3 42 0 3 1059 478 215 15 23 chr15 62241200 62241352 -41253622 - L1_Mus2 LINE L1 -50 6586 6395 3 1059 778 143 41 48 chr15 62241366 62241513 -41253461 - B1_Mur3 SINE Alu -1 148 3 3 1059 312 294 123 7 chr15 62241539 62241693 -41253281 + L1ME2 LINE L1 5635 5806 -358 3 1059 303 244 0 0 chr15 62241694 62241772 -41253202 + (TA)n Simple_repeat Simple_repeat 2 79 0 3 1059 234 300 121 0 chr15 62241774 62241914 -41253060 + L1ME2 LINE L1 5793 5949 -215 3 1059 996 92 0 0 chr15 62242643 62242806 -41252168 + (GA)n Simple_repeat Simple_repeat 2 164 0 3 1059 821 225 217 20 chr15 62243010 62243309 -41251665 - MTEa LTR MaLR -2 377 20 3 1059 281 385 0 0 chr15 62243607 62243698 -41251276 - ID_B1 SINE B4 -48 176 86 3 1059 596 143 8 0 chr15 62244019 62244145 -41250829 + (TA)n Simple_repeat Simple_repeat 2 128 0 3 1059 1200 33 7 0 chr15 62244450 62244603 -41250371 + L1Md_F2 LINE L1 6427 6580 -2 3 1059 246 310 87 29 chr15 62245186 62245289 -41249685 + Lx8 LINE L1 6827 6935 -538 3 1059 835 245 58 5 chr15 62245374 62245579 -41249395 - B3 SINE B2 0 216 1 3 1059 2076 95 10 16 chr15 62245965 62246275 -41248699 - L1_Mus3 LINE L1 0 6638 6331 3 1059 5555 107 7 23 chr15 62246275 62247197 -41247777 - L1_Mm LINE L1 -1850 4033 3127 4 1059 881 92 34 34 chr15 62247413 62247560 -41247414 - B1_Mus1 SINE Alu 0 148 2 4 1059 288 0 0 0 chr15 62247866 62247898 -41247076 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1059 267 298 39 0 chr15 62247905 62248009 -41246965 + L1MA4 LINE L1 5811 5918 -382 4 1059 578 274 0 0 chr15 62248267 62248384 -41246590 - B1_Mur1 SINE Alu -30 119 3 4 1059 432 0 0 0 chr15 62248564 62248612 -41246362 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 4 1059 243 279 50 12 chr15 62248855 62248935 -41246039 - B4 SINE B4 -209 83 1 4 1059 257 345 98 74 chr15 62251626 62251917 -41243057 - RSINE1 SINE B4 0 292 2 4 1059 232 174 131 0 chr15 62252406 62252477 -41242497 - MIRb SINE MIR -52 210 122 4 1059 396 344 108 4 chr15 62253339 62253571 -41241403 - MIRb SINE MIR -7 261 2 4 1059 467 221 0 66 chr15 62253837 62253958 -41241016 + MER5A DNA MER1_type 2 114 -75 4 1059 1261 170 0 26 chr15 62254105 62254334 -41240640 + URR1B DNA MER1_type 1 223 -2 4 1059 244 279 14 29 chr15 62254408 62254478 -41240496 - MER20 DNA MER1_type -130 89 21 4 1059 28 29 0 0 chr15 62255302 62255337 -41239637 + AT_rich Low_complexity Low_complexity 1 35 0 4 1059 1180 114 54 0 chr15 62255505 62255689 -41239285 + B2_Mm2 SINE B2 1 194 -1 4 1059 233 200 0 32 chr15 62255758 62255846 -41239128 + (CAAA)n Simple_repeat Simple_repeat 1 85 0 4 1059 390 162 0 0 chr15 62256741 62256815 -41238159 + CT-rich Low_complexity Low_complexity 1 74 0 4 1059 240 35 0 0 chr15 62257145 62257174 -41237800 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1059 359 348 55 51 chr15 62257327 62257584 -41237390 + MLT1J1 LTR MaLR 18 275 -169 4 1059 393 58 0 0 chr15 62257841 62257893 -41237081 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1059 25 0 0 0 chr15 62257906 62257931 -41237043 + AT_rich Low_complexity Low_complexity 1 25 0 4 1059 207 0 0 0 chr15 62257943 62257966 -41237008 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1059 378 312 56 0 chr15 62258018 62258162 -41236812 - Lx8 LINE L1 -214 7259 7108 4 1060 430 273 21 0 chr15 62259566 62259677 -41235297 - B1F1 SINE Alu -5 115 3 4 1060 258 342 50 17 chr15 62259677 62259703 -41235271 - B4 SINE B4 -199 93 64 4 1060 560 64 43 0 chr15 62261436 62261530 -41233444 + (GA)n Simple_repeat Simple_repeat 1 98 0 4 1060 263 289 30 60 chr15 62261637 62261803 -41233171 + L1MA4A LINE L1 5776 5936 -367 4 1060 610 302 97 30 chr15 62263008 62263308 -41231666 + MER63D DNA AcHobo 38 357 -704 4 1060 210 37 0 0 chr15 62263308 62263335 -41231639 + (TA)n Simple_repeat Simple_repeat 1 27 0 4 1060 583 279 131 5 chr15 62263936 62264127 -41230847 + ID_B1 SINE B4 1 215 -9 4 1060 840 20 0 0 chr15 62264398 62264496 -41230478 + (GA)n Simple_repeat Simple_repeat 2 99 0 4 1060 206 244 0 49 chr15 62265945 62266027 -41228947 + T-rich Low_complexity Low_complexity 3 80 0 4 1060 417 20 0 0 chr15 62266115 62266165 -41228809 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1060 231 254 0 0 chr15 62266165 62266228 -41228746 + GA-rich Low_complexity Low_complexity 1 63 0 4 1060 339 255 140 39 chr15 62266404 62266534 -41228440 - MIR SINE MIR -106 170 21 4 1060 274 366 24 47 chr15 62266647 62266816 -41228158 + MIRb SINE MIR 75 239 -29 4 1060 21 36 0 0 chr15 62267506 62267534 -41227440 + AT_rich Low_complexity Low_complexity 1 28 0 4 1060 243 0 0 0 chr15 62267561 62267588 -41227386 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1060 201 183 0 0 chr15 62267945 62268005 -41226969 + T-rich Low_complexity Low_complexity 1 60 0 4 1060 487 318 92 59 chr15 62268182 62268592 -41226382 + L2a LINE L2 2877 3296 -130 4 1060 529 337 25 29 chr15 62268644 62268919 -41226055 + B4A SINE B4 1 274 -18 4 1060 467 118 12 0 chr15 62268974 62269059 -41225915 + (CA)n Simple_repeat Simple_repeat 1 86 0 4 1060 784 101 0 67 chr15 62269765 62269914 -41225060 - L1Md_F3 LINE L1 -3 6581 6443 4 1060 1056 78 0 0 chr15 62269914 62270056 -41224918 + L1_Mus1 LINE L1 6223 6364 -203 4 1060 187 323 0 0 chr15 62270471 62270533 -41224441 - MIR SINE MIR -10 252 191 4 1060 1075 274 71 24 chr15 62270660 62271000 -41223974 + MTEa LTR MaLR 1 356 -23 4 1060 198 71 0 0 chr15 62271039 62271067 -41223907 + (CTG)n Simple_repeat Simple_repeat 2 29 0 4 1060 776 261 93 107 chr15 62272114 62272298 -41222676 - ORR1D2 LTR MaLR -74 296 124 4 1060 5214 46 0 3 chr15 62272298 62272935 -41222039 - L1Md_F2 LINE L1 -2 6580 5946 4 1060 776 261 93 107 chr15 62272935 62273050 -41221924 - ORR1D2 LTR MaLR -247 123 1 4 1060 1151 283 32 11 chr15 62273495 62273938 -41221036 - L1MA5 LINE L1 -370 5930 5479 4 1060 225 0 0 0 chr15 62273956 62273981 -41220993 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 4 1060 275 204 0 18 chr15 62273982 62274037 -41220937 - B3 SINE B2 -16 200 147 4 1060 300 318 0 64 chr15 62274038 62274179 -41220795 - L1_Mur3 LINE L1 -1078 4802 4671 4 1060 531 203 28 0 chr15 62274207 62274409 -41220565 + GA-rich Low_complexity Low_complexity 1 207 0 4 1060 1494 31 0 7 chr15 62274410 62274959 -41220015 + (GAA)n Simple_repeat Simple_repeat 1 544 0 4 1060 281 318 61 44 chr15 62275038 62275219 -41219755 - L2 LINE L2 -978 2441 2258 4 1060 405 0 0 0 chr15 62275415 62275460 -41219514 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1060 351 0 0 0 chr15 62275460 62275498 -41219476 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 1060 683 247 86 0 chr15 62275537 62275723 -41219251 - B3 SINE B2 -11 205 4 4 1060 7850 66 14 1 chr15 62276954 62278158 -41216816 - L1_Mus1 LINE L1 -2 6565 5349 4 1060 281 348 100 35 chr15 62278413 62278642 -41216332 + MIRb SINE MIR 17 260 -8 4 1060 233 243 17 34 chr15 62278825 62278987 -41215987 + (TG)n Simple_repeat Simple_repeat 1 162 0 4 1060 617 0 14 0 chr15 62278987 62279060 -41215914 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 4 1060 233 243 17 34 chr15 62279060 62279076 -41215898 + (TG)n Simple_repeat Simple_repeat 1 14 0 4 1060 315 71 0 0 chr15 62279075 62279117 -41215857 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 1060 256 293 28 33 chr15 62279117 62279297 -41215677 + (TATG)n Simple_repeat Simple_repeat 2 180 0 4 1060 1917 68 16 8 chr15 62280239 62280492 -41214482 + L1_Mus3 LINE L1 6379 6633 -5 4 1060 780 270 80 5 chr15 62280630 62280831 -41214143 - B3 SINE B2 0 216 1 4 1060 1168 287 12 109 chr15 62282481 62282892 -41212082 - MTE2a LTR MaLR -8 371 1 4 1060 180 327 0 0 chr15 62283258 62283310 -41211664 - MIRc SINE MIR -139 129 78 4 1060 323 250 0 70 chr15 62283338 62283424 -41211550 - ID4_ SINE ID -3 80 1 4 1060 1247 238 71 38 chr15 62284782 62285149 -41209825 + MTE2a LTR MaLR 1 379 0 4 1060 1390 247 99 6 chr15 62285379 62285721 -41209253 + ORR1D1 LTR MaLR 1 374 0 4 1060 411 21 0 0 chr15 62285779 62285827 -41209147 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1060 2168 117 9 0 chr15 62285836 62286152 -41208822 - ORR1A2 LTR MaLR -8 319 1 4 1060 1137 266 64 41 chr15 62286905 62287219 -41207755 + RMER1C Other Other 609 929 -413 4 1060 450 0 0 0 chr15 62287995 62288045 -41206929 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1060 224 246 48 32 chr15 62289341 62289404 -41205570 + ID4_ SINE ID 12 75 -8 4 1060 204 328 52 26 chr15 62289836 62289952 -41205022 - MER5A DNA MER1_type -67 122 4 4 1060 417 86 0 0 chr15 62290146 62290204 -41204770 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 1060 3355 46 15 0 chr15 62290770 62291164 -41203810 - MTB LTR MaLR 0 400 1 4 1060 186 103 0 0 chr15 62291254 62291283 -41203691 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1060 335 358 129 62 chr15 62291302 62291558 -41203416 - B4A SINE B4 -18 274 2 4 1060 277 206 118 0 chr15 62292353 62292421 -41202553 + B1F1 SINE Alu 10 85 -64 4 1060 393 297 23 15 chr15 62292420 62292550 -41202424 - MER5A DNA MER1_type -58 131 1 4 1060 322 277 10 10 chr15 62292703 62292850 -41202124 + (TATG)n Simple_repeat Simple_repeat 1 147 0 4 1060 663 309 95 19 chr15 62292853 62293117 -41201857 - B4 SINE B4 -8 284 1 4 1060 2062 195 23 23 chr15 62293545 62293934 -41201040 + MTD LTR MaLR 24 412 -7 4 1060 672 239 128 21 chr15 62295064 62295252 -41199722 - B3A SINE B2 -6 210 3 4 1060 803 283 61 0 chr15 62295290 62295488 -41199486 - ID_B1 SINE B4 -9 215 6 4 1060 211 308 60 28 chr15 62296446 62296556 -41198418 + L2b LINE L2 3277 3382 -5 4 1060 314 318 100 28 chr15 62296688 62296925 -41198049 - MIRb SINE MIR -1 261 20 4 1060 180 0 0 0 chr15 62296944 62296964 -41198010 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1060 306 0 0 0 chr15 62297282 62297316 -41197658 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1060 281 229 120 83 chr15 62298303 62298436 -41196538 - MLT1H LTR MaLR -2 547 410 4 1060 249 33 0 0 chr15 62298436 62298466 -41196508 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1060 492 312 117 15 chr15 62298533 62298738 -41196236 - MLT1H LTR MaLR -268 281 56 4 1060 360 0 0 0 chr15 62298864 62298904 -41196070 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1060 384 163 0 0 chr15 62300615 62300701 -41194273 + CT-rich Low_complexity Low_complexity 1 86 0 4 1060 228 235 0 19 chr15 62300702 62300754 -41194220 - MIR SINE MIR 0 262 212 4 1060 429 20 0 0 chr15 62301072 62301122 -41193852 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1060 941 284 85 50 chr15 62301211 62301789 -41193185 - L1MA4 LINE L1 -374 5926 5329 5 1060 276 234 15 15 chr15 62304908 62304973 -41190001 - ID4_ SINE ID -18 65 1 5 1060 209 344 32 24 chr15 62304984 62305109 -41189865 - MIRb SINE MIR -108 160 35 5 1060 202 352 83 44 chr15 62305769 62305998 -41188976 + MIRb SINE MIR 3 240 -28 5 1060 260 355 101 11 chr15 62306200 62306388 -41188586 + MIRb SINE MIR 56 260 -8 5 1060 215 327 9 19 chr15 62306731 62306837 -41188137 + GA-rich Low_complexity Low_complexity 1 105 0 5 1060 284 176 0 14 chr15 62306839 62306908 -41188066 + G-rich Low_complexity Low_complexity 2 69 0 5 1060 415 315 12 18 chr15 62306925 62307096 -41187878 + GA-rich Low_complexity Low_complexity 4 173 0 5 1060 429 20 0 0 chr15 62308379 62308429 -41186545 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1060 234 91 0 0 chr15 62308730 62308763 -41186211 + (TCCA)n Simple_repeat Simple_repeat 1 33 0 5 1060 944 274 5 9 chr15 62308986 62309203 -41185771 - B3 SINE B2 0 216 1 5 1060 366 80 0 0 chr15 62309224 62309274 -41185700 + (TTTA)n Simple_repeat Simple_repeat 1 50 0 5 1060 369 248 81 99 chr15 62309281 62309442 -41185532 - RSINE1 SINE B4 0 165 8 5 1060 357 293 66 26 chr15 62309760 62309911 -41185063 + MIR3 SINE MIR 52 208 0 5 1060 958 294 86 34 chr15 62309936 62310461 -41184513 + L1MA5 LINE L1 5743 6294 -6 5 1060 420 314 48 66 chr15 62311533 62311700 -41183274 - RSINE1 SINE B4 0 165 2 5 1060 279 0 0 0 chr15 62311745 62311776 -41183198 + (TATG)n Simple_repeat Simple_repeat 4 34 0 5 1060 22 0 0 0 chr15 62311838 62311860 -41183114 + AT_rich Low_complexity Low_complexity 1 22 0 5 1060 1125 308 31 21 chr15 62311979 62312487 -41182487 - L1MB3 LINE L1 -152 6037 5521 5 1060 419 285 168 0 chr15 62312517 62312654 -41182320 + RSINE1 SINE B4 2 161 -4 5 1060 1558 242 46 27 chr15 62312781 62313147 -41181827 - ORR1D1 LTR MaLR -1 373 1 5 1060 230 204 18 36 chr15 62315748 62315804 -41179170 + MIR3 SINE MIR 126 180 -28 5 1060 201 276 89 38 chr15 62316165 62316244 -41178730 - L2a LINE L2 -2 3424 3342 5 1060 3732 51 56 17 chr15 62316855 62317316 -41177658 + L1_Mus1 LINE L1 6089 6567 0 5 1060 432 0 0 0 chr15 62317385 62317433 -41177541 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1060 435 250 24 124 chr15 62317939 62318108 -41176866 - RMER10B LTR ERVL 0 398 247 5 1060 723 24 0 0 chr15 62318487 62318572 -41176402 + (GAAA)n Simple_repeat Simple_repeat 2 86 0 5 1060 276 364 86 57 chr15 62320697 62321533 -41173441 + L2b LINE L2 2309 3167 -208 5 1060 222 37 0 0 chr15 62321604 62321631 -41173343 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 5 1060 220 250 83 18 chr15 62321861 62321935 -41173039 - MIRb SINE MIR -39 169 99 5 1060 296 298 81 43 chr15 62322503 62322738 -41172236 - MIRc SINE MIR -2 266 23 5 1060 1328 266 63 23 chr15 62324332 62324682 -41170292 + MTE2b LTR MaLR 16 379 0 5 1060 829 226 146 68 chr15 62325082 62325391 -41169583 - Lx9 LINE L1 0 7644 7312 5 1060 311 65 0 21 chr15 62325419 62325466 -41169508 + (TTA)n Simple_repeat Simple_repeat 3 48 0 5 1060 366 74 0 0 chr15 62325756 62325810 -41169164 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1060 565 250 14 42 chr15 62325865 62326007 -41168967 - B3A SINE B2 -59 139 2 5 1060 199 351 61 85 chr15 62326051 62326216 -41168758 - L2b LINE L2 -4 3371 3211 5 1060 216 0 0 0 chr15 62326239 62326263 -41168711 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 5 1060 214 336 34 60 chr15 62326628 62326745 -41168229 - L2b LINE L2 -604 2815 2702 5 1060 543 16 0 0 chr15 62327413 62327477 -41167497 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 5 1060 868 109 0 20 chr15 62329243 62329393 -41165581 + (GGAA)n Simple_repeat Simple_repeat 2 148 0 5 1060 719 130 8 0 chr15 62329863 62329986 -41164988 + (TCCC)n Simple_repeat Simple_repeat 2 125 0 5 1060 414 0 0 0 chr15 62330411 62330457 -41164517 + (TTTTA)n Simple_repeat Simple_repeat 5 50 0 5 1060 1204 49 0 27 chr15 62330458 62330605 -41164369 - B1_Mus2 SINE Alu -4 143 1 5 1060 229 337 31 98 chr15 62331435 62331629 -41163345 - MER34A LTR ERV1 -364 207 27 5 1060 320 258 53 88 chr15 62331766 62331936 -41163038 - YREP_Mm Unknown Unknown -1463 349 186 5 1060 462 314 35 42 chr15 62331805 62331948 -41163026 + ID_B1 SINE B4 82 223 -1 5 1060 181 336 60 26 chr15 62333083 62333199 -41161775 + MIRb SINE MIR 69 188 -80 5 1060 239 361 25 0 chr15 62333777 62333896 -41161078 - MLT1B LTR MaLR -14 453 332 5 1060 299 292 52 10 chr15 62333948 62334045 -41160929 - MLT1B LTR MaLR -227 163 63 5 1060 261 0 0 0 chr15 62334183 62334212 -41160762 + (TATG)n Simple_repeat Simple_repeat 2 30 0 5 1060 633 185 18 18 chr15 62334243 62334353 -41160621 - B4 SINE B4 -2 290 181 5 1060 183 390 28 73 chr15 62334599 62334776 -41160198 - L2c LINE L2 -151 3236 3068 5 1060 1519 232 3 50 chr15 62334797 62335174 -41159800 + Lx5 LINE L1 6685 7043 -7 5 1060 207 0 0 0 chr15 62335959 62335982 -41158992 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 5 1060 504 332 19 19 chr15 62336356 62336571 -41158403 + RMER15 LTR ERVL 348 562 -13 5 1060 476 217 43 12 chr15 62337131 62337294 -41157680 + Charlie5 DNA MER1_type 2429 2596 -28 5 1060 312 337 37 90 chr15 62337298 62337316 -41157658 - B2_Mm1t SINE B2 -14 179 161 5 1060 329 0 24 0 chr15 62337316 62337357 -41157617 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1060 700 300 9 8 chr15 62337357 62337527 -41157447 - B3A SINE B2 -33 160 1 5 1060 306 0 0 0 chr15 62339103 62339137 -41155837 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1060 206 264 9 45 chr15 62339180 62339291 -41155683 + A-rich Low_complexity Low_complexity 1 107 0 5 1060 410 306 9 44 chr15 62340374 62340487 -41154487 + PB1D7 SINE Alu 1 109 -11 5 1060 221 354 12 24 chr15 62340619 62340703 -41154271 + L2b LINE L2 3270 3352 -23 5 1060 299 175 0 0 chr15 62340781 62340838 -41154136 - B1_Mur1 SINE Alu 0 149 93 5 1060 398 342 17 8 chr15 62340850 62340879 -41154095 - B1_Mur1 SINE Alu 0 120 92 5 1060 1499 99 9 26 chr15 62340879 62341106 -41153868 - L1_Mus3 LINE L1 -8 6630 6408 5 1060 398 346 10 0 chr15 62341106 62341194 -41153780 - B1_Mur1 SINE Alu -58 91 3 5 1060 550 205 11 33 chr15 62342368 62342512 -41152462 - MTD LTR MaLR -14 405 260 5 1060 1360 217 49 80 chr15 62344267 62344653 -41150321 - ORR1D1 LTR MaLR 0 374 1 5 1060 574 354 28 5 chr15 62345125 62345338 -41149636 - MER20 DNA MER1_type 0 219 2 5 1060 205 347 101 28 chr15 62345373 62345551 -41149423 - L2a LINE L2 -9 3417 3227 5 1060 315 0 0 0 chr15 62346143 62346178 -41148796 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1060 761 333 38 0 chr15 62346432 62346642 -41148332 + ID_B1 SINE B4 7 224 0 5 1060 1334 293 24 41 chr15 62346761 62347174 -41147800 + RCHARR1 DNA MER1_type 3 408 -566 5 1060 36244 30 0 0 chr15 62347174 62353888 -41141086 - L1Md_T LINE L1 -1 6584 1 5 1060 970 229 8 13 chr15 62353888 62354127 -41140847 + RCHARR1 DNA MER1_type 393 630 -344 5 1060 740 253 97 17 chr15 62354132 62354369 -41140605 + Lx8 LINE L1 6459 6714 -759 5 1060 602 182 0 18 chr15 62354372 62354484 -41140490 + Lx9 LINE L1 7162 7271 -373 5 1060 4759 74 5 6 chr15 62354560 62355199 -41139775 + L1_Mus2 LINE L1 5929 6566 0 5 1060 591 253 156 9 chr15 62355437 62355752 -41139222 + Lx9 LINE L1 7268 7628 -16 5 1060 22 0 0 0 chr15 62355758 62355780 -41139194 + AT_rich Low_complexity Low_complexity 1 22 0 5 1060 346 364 102 14 chr15 62355798 62356152 -41138822 + Lx8 LINE L1 6722 7106 -367 5 1060 256 254 89 8 chr15 62356519 62356599 -41138375 - MTE2a LTR MaLR -301 78 1 5 1060 539 332 127 23 chr15 62356803 62357102 -41137872 - MLT1C LTR MaLR -17 450 121 5 1060 233 158 12 12 chr15 62357987 62358070 -41136904 + RMER17C LTR ERVK 171 253 -157 5 1060 224 170 43 0 chr15 62358078 62358125 -41136849 + CT-rich Low_complexity Low_complexity 1 49 0 5 1060 466 57 29 0 chr15 62358126 62358196 -41136778 + (CA)n Simple_repeat Simple_repeat 2 73 0 5 1060 1034 145 129 5 chr15 62359024 62359225 -41135749 + URR1A DNA MER1_type 1 226 0 5 1060 193 291 98 37 chr15 62359477 62359559 -41135415 - MIRc SINE MIR -68 200 114 5 1060 1342 290 69 22 chr15 62360251 62360742 -41134232 - Lx6 LINE L1 0 7460 6947 5 1060 333 0 0 0 chr15 62361888 62361925 -41133049 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1060 341 337 142 20 chr15 62362811 62363008 -41131966 + MIRb SINE MIR 10 230 -38 5 1060 244 309 86 0 chr15 62363393 62363474 -41131500 - L2b LINE L2 -2 3373 3286 5 1060 1631 215 71 0 chr15 62363483 62363822 -41131152 - RMER15 LTR ERVL 0 575 213 5 1060 246 314 31 24 chr15 62363832 62363959 -41131015 - RMER15 LTR ERVL -291 284 157 5 1060 191 277 0 0 chr15 62364519 62364566 -41130408 - L2 LINE L2 -2064 1355 1309 5 1060 482 265 93 12 chr15 62364687 62364859 -41130115 - MER2 DNA MER2_type -154 191 6 5 1060 3150 56 2 8 chr15 62365345 62365743 -41129231 + MTA_Mm LTR MaLR 1 396 0 5 1060 27 49 0 0 chr15 62365825 62365866 -41129108 + AT_rich Low_complexity Low_complexity 1 41 0 5 1060 22 0 0 0 chr15 62366104 62366126 -41128848 + AT_rich Low_complexity Low_complexity 1 22 0 5 1060 30669 84 23 26 chr15 62366129 62372205 -41122769 - Lx3_Mus LINE L1 -21 6988 869 5 1060 291 241 0 12 chr15 62372208 62372292 -41122682 - Lx3_Mus LINE L1 -6678 306 224 5 1060 1006 224 27 0 chr15 62372883 62373102 -41121872 - URR1B DNA MER1_type 0 225 1 5 1060 405 340 68 6 chr15 62373830 62373993 -41120981 + ORR1E LTR MaLR 1 173 -186 5 1060 332 218 39 19 chr15 62374000 62374103 -41120871 - L1M2 LINE L1 -502 5798 5694 5 1060 260 125 0 0 chr15 62375636 62375684 -41119290 - Lx8 LINE L1 -2 7471 7424 5 1060 201 323 138 0 chr15 62377941 62378071 -41116903 + MIRb SINE MIR 93 240 -28 5 1060 383 400 24 65 chr15 62378228 62378474 -41116500 + ORR1E LTR MaLR 4 239 -120 6 1060 2309 334 98 58 chr15 62378662 62378930 -41116044 + MTE-int LTR MaLR 58 304 -1276 6 1060 525 16 0 0 chr15 62378930 62378992 -41115982 + (TC)n Simple_repeat Simple_repeat 2 63 0 6 1060 2309 334 98 58 chr15 62378992 62380159 -41114815 + MTE-int LTR MaLR 305 1550 -30 6 1060 381 93 0 0 chr15 62380206 62380260 -41114714 + (T)n Simple_repeat Simple_repeat 1 54 0 6 1060 252 333 32 84 chr15 62380301 62380455 -41114519 + ORR1E LTR MaLR 219 364 -15 6 1060 754 204 0 45 chr15 62381977 62382131 -41112843 - B1_Mm SINE Alu 0 147 1 6 1060 370 329 118 53 chr15 62382332 62382560 -41112414 + ORR1E LTR MaLR 75 317 -42 6 1060 222 318 16 16 chr15 62382682 62382746 -41112228 - ID4_ SINE ID -12 71 8 6 1060 237 304 26 43 chr15 62383045 62383162 -41111812 + L2a LINE L2 2777 2891 -528 6 1060 195 373 110 0 chr15 62383328 62383446 -41111528 + L2a LINE L2 3101 3231 -195 6 1060 17720 59 2 4 chr15 62383512 62385893 -41109081 + L1Md_F2 LINE L1 3210 5586 -297 6 1060 7892 57 2 1 chr15 62385893 62386888 -41108086 + L1Md_F2 LINE L1 5587 6582 0 6 1060 3654 170 35 129 chr15 62386888 62388028 -41106946 - L1_Mur3 LINE L1 -3346 2534 1502 6 1060 639 26 0 0 chr15 62388571 62388648 -41106326 + (TC)n Simple_repeat Simple_repeat 1 77 0 6 1060 387 167 61 9 chr15 62388783 62388898 -41106076 + Lx9 LINE L1 7520 7640 -4 6 1060 979 244 49 10 chr15 62388923 62389126 -41105848 + B3 SINE B2 6 216 0 6 1061 341 173 43 60 chr15 62391189 62391306 -41103668 - Lx9 LINE L1 -10 7634 7520 6 1061 240 35 0 0 chr15 62391462 62391491 -41103483 + (TA)n Simple_repeat Simple_repeat 1 29 0 6 1061 275 317 19 9 chr15 62392407 62392512 -41102462 + CT-rich Low_complexity Low_complexity 2 107 0 6 1061 228 379 22 22 chr15 62393032 62393121 -41101853 - B4A SINE B4 -168 124 36 6 1061 495 0 0 0 chr15 62393278 62393333 -41101641 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1061 275 361 25 8 chr15 62393804 62393924 -41101050 + B4 SINE B4 1 122 -170 6 1061 1425 245 30 60 chr15 62394090 62394459 -41100515 + MTD LTR MaLR 13 370 -49 6 1061 1127 222 37 109 chr15 62394467 62394816 -41100158 + MTC-int LTR MaLR 1 324 -934 6 1061 638 306 16 16 chr15 62394822 62395011 -41099963 + MTD LTR MaLR 22 210 -209 6 1061 1438 291 24 12 chr15 62395012 62395516 -41099458 - Lx9 LINE L1 -429 7215 6706 6 1061 342 136 34 0 chr15 62395659 62395718 -41099256 + HAL1-3A_ME LINE L1 1967 2027 -831 6 1061 255 61 0 0 chr15 62395725 62395758 -41099216 + (TA)n Simple_repeat Simple_repeat 1 33 0 6 1061 554 365 34 71 chr15 62395782 62396133 -41098841 + MTEa LTR MaLR 40 377 -2 6 1061 362 139 152 0 chr15 62396230 62396309 -41098665 - Lx8 LINE L1 -331 7142 7052 6 1061 242 240 27 91 chr15 62396351 62396461 -41098513 - Lx8 LINE L1 -400 7073 6971 6 1061 255 282 134 18 chr15 62397414 62397526 -41097448 + MIR3 SINE MIR 79 203 -5 6 1061 612 0 0 0 chr15 62398087 62398155 -41096819 + (TC)n Simple_repeat Simple_repeat 1 68 0 6 1061 183 114 0 0 chr15 62398735 62398770 -41096204 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1061 379 373 33 12 chr15 62399800 62400019 -41094955 + MIRb SINE MIR 45 262 0 6 1061 2474 224 26 9 chr15 62402179 62402720 -41092254 - Lx5 LINE L1 -3 7047 6498 6 1061 962 133 0 0 chr15 62402731 62402881 -41092093 + Lx5 LINE L1 5769 5918 -1132 6 1061 1553 111 8 0 chr15 62403102 62403337 -41091637 - Lx LINE L1 -7 6647 6411 6 1061 273 245 19 48 chr15 62403839 62403946 -41091028 + MIR SINE MIR 89 189 -79 6 1061 245 329 14 0 chr15 62403982 62404052 -41090922 + MER20 DNA MER1_type 1 71 -148 6 1061 396 293 88 54 chr15 62404283 62404431 -41090543 + MER20 DNA MER1_type 67 219 0 6 1061 23 0 0 0 chr15 62404770 62404793 -41090181 + AT_rich Low_complexity Low_complexity 1 23 0 6 1061 481 320 117 62 chr15 62404799 62405235 -41089739 - Lx8 LINE L1 -30 7443 6984 6 1061 931 319 75 5 chr15 62405233 62405608 -41089366 + Lx8 LINE L1 6520 6920 -553 6 1061 832 274 52 54 chr15 62405716 62405761 -41089213 - L1_Rod LINE L1 -27 5820 5785 6 1061 1413 91 0 68 chr15 62405761 62405996 -41088978 - L1_Mus1 LINE L1 -2 6565 6347 6 1061 832 274 52 54 chr15 62405996 62406413 -41088561 - L1_Rod LINE L1 -63 5784 5359 6 1061 4822 164 93 6 chr15 62407640 62408519 -41086455 + RMER17B LTR ERVK 3 958 0 6 1061 465 315 71 68 chr15 62408589 62408841 -41086133 + MTEa LTR MaLR 121 373 -6 6 1061 594 331 67 22 chr15 62408851 62409163 -41085811 + MLT1A0 LTR MaLR 27 352 -13 6 1061 236 317 49 19 chr15 62409290 62409403 -41085571 + MIR SINE MIR 46 165 -103 6 1061 396 0 0 0 chr15 62411010 62411054 -41083920 + (GA)n Simple_repeat Simple_repeat 1 44 0 6 1061 687 122 0 0 chr15 62411637 62411768 -41083206 + (GA)n Simple_repeat Simple_repeat 2 132 0 6 1061 524 336 179 8 chr15 62412943 62413183 -41081791 + B4A SINE B4 3 283 -9 6 1061 32 26 0 0 chr15 62413208 62413247 -41081727 + AT_rich Low_complexity Low_complexity 1 39 0 6 1061 443 346 58 65 chr15 62413922 62414197 -41080777 + B4A SINE B4 3 275 -17 6 1061 230 361 40 20 chr15 62414215 62414314 -41080660 - MER5B DNA MER1_type -55 123 23 6 1061 219 225 0 59 chr15 62414379 62414464 -41080510 + A-rich Low_complexity Low_complexity 2 81 0 6 1061 324 0 0 0 chr15 62414953 62414989 -41079985 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1061 530 219 18 0 chr15 62416121 62416235 -41078739 - ORR1C2 LTR MaLR 0 384 269 6 1061 291 371 40 81 chr15 62416614 62416837 -41078137 + MER20 DNA MER1_type 3 216 -3 6 1061 870 16 47 0 chr15 62417442 62417570 -41077404 + (GA)n Simple_repeat Simple_repeat 1 134 0 6 1061 297 0 0 0 chr15 62419077 62419110 -41075864 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 1061 269 298 103 67 chr15 62422767 62422961 -41072013 + MIRc SINE MIR 10 210 -58 6 1061 270 194 0 0 chr15 62423115 62423177 -41071797 + (TGG)n Simple_repeat Simple_repeat 1 62 0 6 1061 26 50 0 0 chr15 62425137 62425177 -41069797 + AT_rich Low_complexity Low_complexity 1 40 0 6 1061 280 306 100 43 chr15 62425263 62425403 -41069571 + MIRb SINE MIR 45 192 -76 6 1061 423 38 0 0 chr15 62426420 62426473 -41068501 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 1061 286 340 7 59 chr15 62426967 62427120 -41067854 - MIR SINE MIR -13 249 105 6 1061 901 265 217 3 chr15 62427286 62427581 -41067393 + ORR1D2 LTR MaLR 4 361 -9 6 1061 384 419 55 31 chr15 62427686 62428011 -41066963 + MLT1H LTR MaLR 13 345 -204 6 1061 426 343 130 24 chr15 62428345 62428599 -41066375 - RMER15 LTR ERVL -55 520 240 6 1061 1176 62 7 0 chr15 62429308 62429453 -41065521 + B1_Mm SINE Alu 1 146 -1 6 1061 207 0 0 0 chr15 62429479 62429502 -41065472 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 1061 282 143 0 0 chr15 62430268 62430317 -41064657 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1061 337 341 29 7 chr15 62430318 62430454 -41064520 + B1F1 SINE Alu 2 140 -9 6 1061 219 365 54 0 chr15 62430472 62430546 -41064428 + ID4 SINE ID 5 82 -1 6 1061 312 376 0 0 chr15 62431634 62431735 -41063239 + MLT1J1 LTR MaLR 100 200 -244 6 1061 3062 40 3 0 chr15 62432805 62433175 -41061799 - L1Md_F2 LINE L1 0 6582 6212 6 1061 7772 147 25 27 chr15 62433193 62434586 -41060388 - Lx4A LINE L1 -13 7045 5655 6 1061 1207 111 0 29 chr15 62434615 62434820 -41060154 - Lx4A LINE L1 -848 5029 4831 6 1061 6989 128 66 52 chr15 62434817 62435388 -41059586 - Lx4A LINE L1 -3155 2722 2213 6 1061 564 56 0 0 chr15 62435388 62435460 -41059514 + (TTCC)n Simple_repeat Simple_repeat 3 74 0 6 1061 920 64 96 0 chr15 62435460 62435585 -41059389 - B1_Mus1 SINE Alu -10 138 2 6 1061 6989 128 66 52 chr15 62435585 62436447 -41058527 - Lx4A LINE L1 -3665 2212 1273 6 1061 411 100 0 0 chr15 62436447 62436517 -41058457 + (TG)n Simple_repeat Simple_repeat 2 71 0 6 1061 6989 147 61 6 chr15 62436517 62437227 -41057747 - Lx4A LINE L1 -4605 1272 516 6 1061 996 103 0 0 chr15 62438054 62438219 -41056755 + (GA)n Simple_repeat Simple_repeat 1 165 0 6 1061 731 281 170 8 chr15 62438428 62438958 -41056016 - L1MC4 LINE L1 -149 7893 7278 6 1061 436 366 60 67 chr15 62438978 62439326 -41055648 - L1MC4 LINE L1 -794 7088 6744 6 1061 539 257 40 81 chr15 62439416 62439564 -41055410 - B1_Mur1 SINE Alu -2 147 6 6 1061 247 266 52 26 chr15 62439667 62439783 -41055191 - L1MC4 LINE L1 -1433 6562 6444 6 1061 21 36 0 0 chr15 62441940 62441968 -41053006 + AT_rich Low_complexity Low_complexity 1 28 0 6 1061 301 242 0 43 chr15 62441968 62442037 -41052937 - L1MD3 LINE L1 -545 7450 7385 6 1061 245 355 13 0 chr15 62442253 62442329 -41052645 + ID4 SINE ID 3 79 -4 6 1061 1922 224 2 18 chr15 62443733 62444128 -41050846 - MTB_Mm LTR MaLR 0 407 19 6 1061 239 83 0 0 chr15 62444353 62444401 -41050573 + L1_Mus2 LINE L1 6518 6565 -1 6 1061 283 354 16 84 chr15 62444603 62444794 -41050180 + ORR1D2 LTR MaLR 1 178 -192 6 1061 302 405 35 12 chr15 62445511 62445681 -41049293 - LTR33 LTR ERVL -307 208 35 6 1061 261 83 0 0 chr15 62446884 62446920 -41048054 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 6 1061 2228 158 5 33 chr15 62446922 62447321 -41047653 - Lx4B LINE L1 -18 7040 6653 6 1061 183 246 134 42 chr15 62447661 62447780 -41047194 - L2 LINE L2 -1108 2311 2182 6 1061 195 388 20 10 chr15 62448306 62448405 -41046569 + MIRb SINE MIR 37 136 -132 6 1061 226 286 96 32 chr15 62448870 62448964 -41046010 + MLT1K LTR MaLR 493 592 -3 6 1061 2306 225 70 126 chr15 62449001 62449885 -41045089 + RMER1B Other Other 162 1065 -1 6 1061 405 0 0 0 chr15 62450102 62450147 -41044827 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1061 17360 22 0 1 chr15 62450590 62453400 -41041574 - L1Md_T LINE L1 0 6582 3775 6 1061 4789 26 0 0 chr15 62453399 62454004 -41040970 + L1Md_T LINE L1 3043 3647 -2236 6 1061 418 345 90 14 chr15 62454133 62454277 -41040697 + RSINE1 SINE B4 11 165 0 6 1061 575 321 175 13 chr15 62454288 62454682 -41040292 + Lx8 LINE L1 7007 7464 -9 6 1061 1069 239 8 34 chr15 62455893 62456161 -41038813 - RCHARR1 DNA MER1_type -164 810 550 6 1061 483 325 26 140 chr15 62456170 62456399 -41038575 - RCHARR1 DNA MER1_type -768 206 4 6 1061 1594 135 16 4 chr15 62457006 62457252 -41037722 + RLTR27 LTR ERVK 1 249 -60 6 1061 8501 43 14 0 chr15 62457613 62459408 -41035566 - L1Md_F2 LINE L1 -1 6581 4763 6 1061 402 316 90 0 chr15 62459423 62459535 -41035439 + MER2 DNA MER2_type 140 264 -81 7 1061 432 0 0 0 chr15 62459535 62459583 -41035391 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1061 402 316 90 0 chr15 62459583 62459647 -41035327 + MER2 DNA MER2_type 265 331 -14 7 1061 424 269 29 65 chr15 62461081 62461220 -41033754 - ID_B1 SINE B4 -3 221 88 7 1061 187 294 105 99 chr15 62461393 62461555 -41033419 - L2a LINE L2 -1 3425 3263 7 1061 625 327 54 57 chr15 62461952 62462305 -41032669 + ORR1E LTR MaLR 4 355 -4 7 1061 324 333 0 8 chr15 62462331 62462452 -41032522 + (CA)n Simple_repeat Simple_repeat 2 121 0 7 1061 669 333 40 71 chr15 62462452 62462830 -41032144 - MLT1A LTR MaLR 0 374 9 7 1061 2626 44 6 204 chr15 62463769 62464255 -41030719 - RLTR10 LTR ERVK 0 390 1 7 1061 16413 17 1 13 chr15 62464257 62466251 -41028723 - RLTR10-int LTR ERVK -3 1984 16 7 1061 2426 47 6 204 chr15 62466288 62466772 -41028202 - RLTR10 LTR ERVK -2 388 1 7 1061 415 349 128 23 chr15 62466772 62467014 -41027960 + ORR1D2 LTR MaLR 64 332 -38 7 1061 233 275 46 81 chr15 62467230 62467317 -41027657 + ORR1A1 LTR MaLR 141 224 -122 7 1061 33 25 0 0 chr15 62467537 62467577 -41027397 + AT_rich Low_complexity Low_complexity 1 40 0 7 1061 5404 54 15 0 chr15 62467577 62468260 -41026714 - L1Md_F3 LINE L1 -16 6568 5876 7 1061 3302 79 24 9 chr15 62468557 62469019 -41025955 + L1_Mus4 LINE L1 6162 6630 -6 7 1061 306 0 0 0 chr15 62469453 62469487 -41025487 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1061 623 287 93 23 chr15 62469542 62469799 -41025175 - B4A SINE B4 -14 278 4 7 1061 381 299 16 89 chr15 62470267 62470513 -41024461 + L1MC5 LINE L1 7546 7773 -188 7 1061 189 250 98 16 chr15 62471274 62471335 -41023639 - L2a LINE L2 0 3426 3361 7 1061 193 383 11 45 chr15 62471777 62471941 -41023033 + L2a LINE L2 3219 3424 -2 7 1061 265 274 23 45 chr15 62472033 62472121 -41022853 - MIR3 SINE MIR -7 201 116 7 1061 667 308 45 12 chr15 62472578 62472821 -41022153 - Charlie10 DNA MER1_type -2560 262 12 7 1061 193 372 51 51 chr15 62472829 62473064 -41021910 + MIR SINE MIR 28 262 0 7 1061 711 35 0 0 chr15 62473492 62473578 -41021396 + (TTCCC)n Simple_repeat Simple_repeat 4 89 0 7 1061 256 148 0 32 chr15 62473578 62473641 -41021333 + T-rich Low_complexity Low_complexity 3 63 0 7 1061 1334 61 0 11 chr15 62473642 62473824 -41021150 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 1061 23 0 0 0 chr15 62473906 62473929 -41021045 + AT_rich Low_complexity Low_complexity 1 23 0 7 1061 218 362 62 39 chr15 62474194 62474372 -41020602 - MIR SINE MIR -24 238 57 7 1061 1167 328 33 18 chr15 62474593 62475105 -41019869 - Lx7 LINE L1 -414 7282 6763 7 1061 394 338 79 79 chr15 62476848 62477153 -41017821 - L1MEg2 LINE L1 -3662 3792 3488 7 1061 564 367 54 32 chr15 62477514 62477793 -41017181 - B4A SINE B4 -6 286 2 7 1061 225 325 77 48 chr15 62477895 62478102 -41016872 - L1MEg2 LINE L1 -6164 288 76 7 1061 369 319 65 30 chr15 62478235 62478403 -41016571 + MIRb SINE MIR 94 267 -1 7 1061 182 308 75 19 chr15 62478794 62478900 -41016074 + MIR SINE MIR 68 179 -83 7 1061 437 292 35 0 chr15 62479245 62479358 -41015616 + MTEa LTR MaLR 8 124 -255 7 1061 6731 141 6 3 chr15 62479360 62479424 -41015550 + L1_Mus3 LINE L1 4668 4731 -1152 7 1061 368 0 43 0 chr15 62479424 62479471 -41015503 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 7 1061 6731 119 36 2 chr15 62479471 62480937 -41014037 + L1_Mus3 LINE L1 4732 6246 -392 7 1061 6009 108 22 16 chr15 62480936 62482114 -41012860 + L1VL4 LINE L1 226 1405 -2154 7 1061 7213 9 0 0 chr15 62482114 62482917 -41012057 - L1Md_T LINE L1 0 6582 5780 7 1061 6009 87 13 26 chr15 62482917 62483354 -41011620 + L1VL4 LINE L1 1406 1834 -1725 7 1061 2486 157 0 34 chr15 62483352 62483826 -41011148 + Lx2 LINE L1 5226 5683 -200 7 1061 667 36 26 26 chr15 62483832 62483946 -41011028 - L1Md_F3 LINE L1 -1 6583 6470 7 1061 4668 30 2 2 chr15 62483947 62484523 -41010451 - L1Md_F3 LINE L1 -333 6251 5676 7 1061 5633 129 30 5 chr15 62484523 62485474 -41009500 + Lx2 LINE L1 5671 6645 -352 7 1061 1315 152 0 0 chr15 62485472 62485695 -41009279 + Lx2 LINE L1 6775 6997 0 7 1061 879 154 64 42 chr15 62485825 62486089 -41008885 - Lx9 LINE L1 -2 7642 7373 7 1061 23 33 0 0 chr15 62487354 62487384 -41007590 + AT_rich Low_complexity Low_complexity 1 30 0 7 1061 230 281 156 0 chr15 62489126 62489222 -41005752 + MIRc SINE MIR 63 173 -95 7 1061 578 268 207 48 chr15 62489762 62490052 -41004922 - ORR1E LTR MaLR 0 359 24 7 1061 3244 49 0 12 chr15 62491710 62492122 -41002852 + L1Md_F2 LINE L1 6164 6570 -12 7 1061 882 296 44 28 chr15 62492589 62492906 -41002068 + MLT1A0 LTR MaLR 20 341 -24 7 1061 478 259 95 15 chr15 62492965 62493102 -41001872 + B3 SINE B2 30 177 -39 7 1061 846 78 0 0 chr15 62493142 62493257 -41001717 + (GA)n Simple_repeat Simple_repeat 1 115 0 7 1061 346 255 108 9 chr15 62493547 62493658 -41001316 - ORR1E LTR MaLR -10 349 228 7 1061 326 137 0 0 chr15 62493656 62493707 -41001267 + ORR1B1 LTR MaLR 343 393 -1 7 1061 709 92 0 0 chr15 62494212 62494321 -41000653 - L1_Mus4 LINE L1 -338 6298 6190 7 1061 508 175 0 0 chr15 62494326 62494423 -41000551 - L1_Mm LINE L1 -534 5349 5253 7 1061 1760 119 24 17 chr15 62494428 62494486 -41000488 - L1_Mus3 LINE L1 -12 6626 6564 7 1061 300 0 38 57 chr15 62494486 62494539 -41000435 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 7 1061 1760 119 24 17 chr15 62494539 62494770 -41000204 - L1_Mus3 LINE L1 -75 6563 6335 7 1061 2821 112 37 19 chr15 62494778 62495241 -40999733 + L1_Mus4 LINE L1 6166 6636 0 7 1061 1140 305 178 16 chr15 62496495 62497202 -40997772 - Lx8 LINE L1 0 7473 6652 7 1061 5032 160 12 35 chr15 62497199 62498194 -40996780 - Lx LINE L1 -272 5614 4643 7 1061 6262 118 41 11 chr15 62498185 62499200 -40995774 + Lx LINE L1 5605 6650 -4 7 1061 999 311 40 75 chr15 62499201 62499705 -40995269 - Lx8 LINE L1 -810 6663 6178 7 1061 832 236 136 19 chr15 62500084 62500348 -40994626 + ORR1D1 LTR MaLR 80 374 0 1 1061 190 342 51 0 chr15 62500365 62500444 -40994530 + MIR SINE MIR 124 206 -56 2 1061 462 323 60 12 chr15 62501106 62501272 -40993702 + MER58A DNA MER1_type 47 220 -4 3 1061 679 363 58 63 chr15 62501356 62501912 -40993062 + MLT1F2 LTR MaLR 4 556 -4 4 1061 670 259 25 55 chr15 62501950 62502150 -40992824 - ORR1C2 LTR MaLR -24 360 167 5 1061 378 85 0 0 chr15 62502160 62502219 -40992755 + (GA)n Simple_repeat Simple_repeat 1 59 0 6 1061 620 249 37 53 chr15 62502219 62502406 -40992568 - ORR1C2 LTR MaLR -185 189 6 5 1061 218 286 0 14 chr15 62503548 62503619 -40991355 + T-rich Low_complexity Low_complexity 3 72 0 7 1061 518 350 5 63 chr15 62503759 62503966 -40991008 + MER58A DNA MER1_type 30 224 0 8 1061 3156 66 0 0 chr15 62505692 62506084 -40988890 - L1_Mus1 LINE L1 -1 6566 6175 9 1061 390 385 22 18 chr15 62506334 62506556 -40988418 - MER58A DNA MER1_type 0 224 2 1 1061 677 328 44 0 chr15 62508225 62508405 -40986569 + ORR1E LTR MaLR 4 191 -168 1 1061 1565 213 127 81 chr15 62508405 62508478 -40986496 - RLTR11A LTR ERVK 0 528 459 1 1061 474 18 0 0 chr15 62508478 62508533 -40986441 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1061 1565 213 127 81 chr15 62508533 62508954 -40986020 - RLTR11A LTR ERVK -70 458 12 1 1061 640 245 70 13 chr15 62508963 62509120 -40985854 + ORR1E LTR MaLR 211 376 -3 1 1061 189 211 46 123 chr15 62509140 62509205 -40985769 + L2c LINE L2 3091 3150 -237 1 1061 191 365 54 27 chr15 62511431 62511580 -40983394 - MIRb SINE MIR -60 208 56 1 1061 23 54 0 0 chr15 62511928 62511965 -40983009 + AT_rich Low_complexity Low_complexity 1 37 0 1 1061 187 189 19 19 chr15 62511971 62512025 -40982949 + (TATG)n Simple_repeat Simple_repeat 1 54 0 1 1061 370 232 240 0 chr15 62512043 62512168 -40982806 - RSINE1 SINE B4 -8 157 3 1 1061 1232 225 144 9 chr15 62512425 62512752 -40982222 - ORR1D1 LTR MaLR -1 373 3 1 1061 828 331 53 10 chr15 62512760 62513062 -40981912 - Lx8 LINE L1 -116 7357 7043 2 1061 477 0 0 0 chr15 62515040 62515093 -40979881 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 1061 463 361 25 25 chr15 62515601 62515760 -40979214 + RSINE1 SINE B4 4 162 -3 2 1061 576 359 131 24 chr15 62515909 62516329 -40978645 + MLT1C LTR MaLR 3 467 0 2 1061 1954 221 55 7 chr15 62516463 62516918 -40978056 - Lx5 LINE L1 -3 7047 6571 2 1061 1591 163 17 92 chr15 62516917 62516968 -40978006 + Lx5 LINE L1 5547 5592 -285 2 1061 3125 96 0 2 chr15 62516968 62517394 -40977580 + Lx3_Mus LINE L1 6585 7009 0 2 1061 2790 163 18 18 chr15 62517394 62518106 -40976868 + Lx5 LINE L1 5593 6325 -725 2 1061 252 0 0 0 chr15 62518106 62518134 -40976840 + (T)n Simple_repeat Simple_repeat 1 28 0 2 132 36239 30 1 0 chr15 62518379 62525329 -40969645 - L1Md_T LINE L1 0 6585 1 2 1062 1230 165 39 0 chr15 62525330 62525560 -40969414 + Lx5 LINE L1 6312 6550 -500 2 1062 22 0 0 0 chr15 62525925 62525947 -40969027 + AT_rich Low_complexity Low_complexity 1 22 0 2 1062 182 222 54 36 chr15 62526792 62526848 -40968126 + L3 LINE CR1 4168 4224 -265 3 1062 291 219 158 64 chr15 62527652 62527823 -40967151 + MIR SINE MIR 30 216 -46 3 1062 230 307 184 0 chr15 62529555 62529669 -40965305 + MIR SINE MIR 98 232 -30 3 1062 222 206 0 42 chr15 62530068 62530139 -40964835 + (TCTCTG)n Simple_repeat Simple_repeat 5 72 0 3 1062 192 152 0 0 chr15 62530139 62530172 -40964802 + CT-rich Low_complexity Low_complexity 3 35 0 3 1062 208 346 94 0 chr15 62530815 62530942 -40964032 - MIRc SINE MIR -45 223 85 3 1062 240 111 0 0 chr15 62531146 62531182 -40963792 + (GGGA)n Simple_repeat Simple_repeat 4 39 0 3 1062 458 361 10 19 chr15 62532477 62532683 -40962291 - MIRb SINE MIR -56 212 9 3 1062 333 0 0 0 chr15 62533711 62533748 -40961226 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1062 588 299 0 0 chr15 62534963 62535090 -40959884 + RSINE1 SINE B4 12 138 -27 3 1062 353 218 64 0 chr15 62535224 62535302 -40959672 - MTE2b LTR MaLR -8 371 289 4 1062 1187 227 35 58 chr15 62535324 62535637 -40959337 + RLTR18 LTR ERVK 18 323 -293 4 1062 651 304 14 40 chr15 62535666 62535889 -40959085 + RLTR18 LTR ERVK 296 512 0 4 1062 982 268 60 30 chr15 62535889 62536155 -40958819 - MTE2b LTR MaLR -96 283 10 4 1062 232 146 49 0 chr15 62536168 62536209 -40958765 - MTC LTR MaLR -346 75 33 4 1062 2401 159 31 17 chr15 62536897 62537312 -40957662 + MTC LTR MaLR 1 421 0 4 1062 727 215 36 15 chr15 62538003 62538168 -40956806 - MTE2a LTR MaLR -14 393 209 4 1062 1512 184 67 3 chr15 62538170 62538498 -40956476 - RLTR15 LTR ERVK 0 359 11 4 1062 582 302 48 79 chr15 62538437 62538598 -40956376 - MTE2a LTR MaLR -112 267 108 4 1062 1929 177 68 3 chr15 62538598 62538966 -40956008 - ORR1B1 LTR MaLR 0 394 3 4 1062 582 282 33 80 chr15 62538966 62539104 -40955870 - MTE2a LTR MaLR -281 138 1 4 1062 25 51 0 0 chr15 62539203 62539242 -40955732 + AT_rich Low_complexity Low_complexity 1 39 0 4 1062 413 183 20 51 chr15 62540156 62540254 -40954720 + Lx7 LINE L1 7157 7251 -445 4 1062 315 0 0 0 chr15 62540284 62540319 -40954655 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 1062 207 0 0 0 chr15 62540397 62540420 -40954554 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1062 205 204 20 0 chr15 62540443 62540492 -40954482 + T-rich Low_complexity Low_complexity 3 52 0 5 1062 248 208 0 0 chr15 62540658 62540706 -40954268 - ID SINE ID -168 56 9 5 1062 233 182 18 0 chr15 62542768 62542823 -40952151 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 1062 22 56 0 0 chr15 62542824 62542860 -40952114 + AT_rich Low_complexity Low_complexity 1 36 0 5 1062 212 319 77 38 chr15 62543319 62543472 -40951502 - MIRc SINE MIR -74 194 34 5 1062 183 234 43 0 chr15 62543585 62543632 -40951342 + MIR SINE MIR 110 158 -104 5 1062 287 78 20 0 chr15 62544403 62544454 -40950520 + (CCCCCA)n Simple_repeat Simple_repeat 3 54 0 5 1062 21 0 0 0 chr15 62544643 62544664 -40950310 + AT_rich Low_complexity Low_complexity 1 21 0 5 1062 333 118 0 0 chr15 62545149 62545200 -40949774 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 1062 734 212 14 7 chr15 62545354 62545501 -40949473 - B1_Mur2 SINE Alu -1 148 1 6 1062 490 286 117 0 chr15 62546312 62546466 -40948508 - MIRb SINE MIR -9 259 88 6 1062 612 339 51 12 chr15 62547310 62547851 -40947123 + L1MA8 LINE L1 5585 6142 -149 6 1062 592 198 32 6 chr15 62547860 62547996 -40946978 + B1_Mus1 SINE Alu 1 149 0 6 1062 5747 80 1 3 chr15 62548411 62549172 -40945802 - L1Md_F2 LINE L1 -12 6570 5811 6 1062 225 224 0 39 chr15 62549642 62549693 -40945281 - MTE2a LTR MaLR -53 326 278 6 1062 218 305 0 48 chr15 62550156 62550218 -40944756 + MIR SINE MIR 197 255 -7 6 1062 203 171 0 0 chr15 62550549 62550590 -40944384 + T-rich Low_complexity Low_complexity 1 41 0 6 1062 442 293 17 28 chr15 62550840 62550975 -40943999 + ID_B1 SINE B4 85 211 -13 6 1062 731 303 53 53 chr15 62551478 62551778 -40943196 + MLT1A0 LTR MaLR 66 365 0 6 1062 246 192 0 0 chr15 62552321 62552373 -40942601 + G-rich Low_complexity Low_complexity 1 52 0 7 1062 198 207 81 121 chr15 62552571 62552670 -40942304 - L2 LINE L2 -1334 2085 1991 7 1062 541 345 40 0 chr15 62552714 62552888 -40942086 - MER20 DNA MER1_type -7 212 32 7 1062 360 0 0 0 chr15 62552993 62553033 -40941941 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1062 210 235 0 0 chr15 62553036 62553087 -40941887 + GA-rich Low_complexity Low_complexity 2 52 0 7 1062 3287 113 2 14 chr15 62554105 62554590 -40940384 + Lx3_Mus LINE L1 6524 7002 -7 7 1062 468 0 0 0 chr15 62555425 62555477 -40939497 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 1062 306 0 0 0 chr15 62555477 62555510 -40939464 + (GA)n Simple_repeat Simple_repeat 1 34 0 7 1062 292 315 0 0 chr15 62556370 62556443 -40938531 - ID4_ SINE ID 0 83 11 7 1062 336 240 48 8 chr15 62557355 62557481 -40937493 + L1MC1 LINE L1 5768 5898 -435 7 1062 433 299 98 77 chr15 62557537 62557834 -40937140 + L1MC1 LINE L1 6003 6305 -28 7 1062 268 369 43 12 chr15 62557960 62558122 -40936852 - MIR SINE MIR -7 255 89 8 1062 701 244 0 19 chr15 62558730 62558889 -40936085 - MLT1A1 LTR MaLR -10 398 243 8 1062 886 295 132 41 chr15 62559149 62559513 -40935461 + MLT1A1 LTR MaLR 2 398 -10 8 1062 1116 184 8 78 chr15 62561835 62562077 -40932897 - URR1B DNA MER1_type 0 225 1 8 1062 21 0 0 0 chr15 62562541 62562562 -40932412 + AT_rich Low_complexity Low_complexity 1 21 0 8 1062 4185 115 29 8 chr15 62562646 62563293 -40931681 - L1_Mus3 LINE L1 -4 6634 5974 8 1062 465 19 0 0 chr15 62563321 62563375 -40931599 + (TC)n Simple_repeat Simple_repeat 1 54 0 8 1062 489 319 82 20 chr15 62563547 62563861 -40931113 - Lx9 LINE L1 -339 7305 6897 8 1062 1150 82 0 17 chr15 62564690 62564864 -40930110 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 8 1062 343 233 98 0 chr15 62564864 62564997 -40929977 + L1MB7 LINE L1 6039 6184 0 8 1062 210 240 65 194 chr15 62565117 62565241 -40929733 + MIRc SINE MIR 22 129 -139 9 1062 1571 180 86 7 chr15 62565374 62565739 -40929235 + Lx4A LINE L1 6690 7056 -2 9 1062 189 74 0 0 chr15 62565740 62565767 -40929207 + (TTAAA)n Simple_repeat Simple_repeat 5 31 0 9 1062 435 302 0 0 chr15 62566337 62566443 -40928531 - PB1 SINE Alu -13 114 9 9 1062 217 250 11 11 chr15 62566977 62567070 -40927904 + CT-rich Low_complexity Low_complexity 1 93 0 9 1062 541 197 71 21 chr15 62567687 62567827 -40927147 - MTD LTR MaLR -7 412 266 9 1062 782 326 32 32 chr15 62567884 62568137 -40926837 - MTD LTR MaLR -149 270 18 9 1062 192 330 157 65 chr15 62568203 62568388 -40926586 - MIR SINE MIR -26 236 35 9 1062 22 56 0 0 chr15 62568427 62568463 -40926511 + AT_rich Low_complexity Low_complexity 1 36 0 9 1062 1305 159 49 161 chr15 62568812 62569179 -40925795 - ORR1C2 LTR MaLR -58 326 1 9 1062 1373 71 0 0 chr15 62569299 62569481 -40925493 - L1Md_F2 LINE L1 -12 6570 6389 9 1062 28 29 0 0 chr15 62569872 62569907 -40925067 + AT_rich Low_complexity Low_complexity 1 35 0 1 1062 711 182 68 12 chr15 62571950 62572111 -40922863 + URR1A DNA MER1_type 57 226 0 1 1062 306 289 98 73 chr15 62572111 62572155 -40922819 - CYRA11_Mm Unknown Y-chromosome -278 339 130 1 1062 185 302 61 70 chr15 62572315 62572429 -40922545 + L2c LINE L2 3233 3345 -42 1 1062 219 204 0 20 chr15 62573548 62573598 -40921376 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 1 1062 1915 307 52 36 chr15 62573921 62574887 -40920087 - Lx9 LINE L1 -203 7441 6461 1 1062 546 124 0 0 chr15 62574994 62575083 -40919891 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 1 1062 249 33 0 0 chr15 62577427 62577457 -40917517 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 1 1062 630 84 0 0 chr15 62578507 62578590 -40916384 + BC1_Mm scRNA scRNA 3 85 -67 1 1062 1724 51 8 21 chr15 62580565 62580805 -40914169 - L1_Mus1 LINE L1 -744 5823 5587 1 1062 4189 61 4 0 chr15 62580820 62581345 -40913629 + L1_Mus1 LINE L1 6039 6565 -2 1 1062 180 152 0 0 chr15 62581355 62581388 -40913586 + A-rich Low_complexity Low_complexity 1 33 0 1 1062 2111 246 48 48 chr15 62582244 62582811 -40912163 - RMER15 LTR ERVL -2 573 7 1 1062 228 300 0 0 chr15 62583657 62583717 -40911257 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 1062 27 49 0 0 chr15 62585631 62585672 -40909302 + AT_rich Low_complexity Low_complexity 1 41 0 1 1062 293 297 155 28 chr15 62586028 62586155 -40908819 - L2a LINE L2 -1 3425 3280 1 1062 312 27 0 0 chr15 62586155 62586192 -40908782 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1062 293 297 155 28 chr15 62586192 62586206 -40908768 - L2a LINE L2 -147 3279 3266 1 1062 186 171 0 0 chr15 62586293 62586334 -40908640 + (TCTCTG)n Simple_repeat Simple_repeat 4 44 0 1 1062 256 253 0 54 chr15 62586334 62586426 -40908548 + (TATATG)n Simple_repeat Simple_repeat 3 89 0 1 1062 315 234 18 18 chr15 62586539 62586648 -40908326 + (TA)n Simple_repeat Simple_repeat 1 109 0 1 1062 1509 322 119 27 chr15 62586740 62587621 -40907353 - L2a LINE L2 -442 2977 2016 1 1062 266 306 157 35 chr15 62588554 62588930 -40906044 - MER113 DNA MER1_type -5 516 95 1 1062 236 253 0 224 chr15 62590055 62590162 -40904812 + RSINE1 SINE B4 83 165 0 1 1062 330 26 0 0 chr15 62590163 62590202 -40904772 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 1 1062 201 281 15 61 chr15 62590437 62590505 -40904469 - L2b LINE L2 -33 3393 3298 1 1062 239 305 50 58 chr15 62591099 62591238 -40903736 + MIRc SINE MIR 81 218 -50 1 1062 183 42 0 0 chr15 62591514 62591538 -40903436 + (TTG)n Simple_repeat Simple_repeat 3 26 0 1 1062 229 341 22 65 chr15 62591699 62591837 -40903137 - MIRb SINE MIR -44 224 93 1 1062 3058 81 5 0 chr15 62592135 62592542 -40902432 - L1_Mus1 LINE L1 -2 6565 6157 1 1062 954 288 20 85 chr15 62592912 62593253 -40901721 + MTE2a LTR MaLR 58 376 -3 1 1062 25 51 0 0 chr15 62593420 62593459 -40901515 + AT_rich Low_complexity Low_complexity 1 39 0 1 1062 221 329 0 24 chr15 62595401 62595485 -40899489 + ID4 SINE ID 2 83 0 1 1062 310 315 56 0 chr15 62595518 62595626 -40899348 - MTEb LTR MaLR -102 277 164 1 1062 36273 30 0 0 chr15 62595636 62601999 -40892975 - L1Md_T LINE L1 0 6585 126 1 1062 2112 19 7 0 chr15 62602158 62602429 -40892545 - L1Md_Gf LINE L1 -6200 322 50 1 1062 2232 187 33 83 chr15 62602428 62603006 -40891968 - Lx3C LINE L1 -1 6975 6427 1 1062 3995 164 111 15 chr15 62603003 62603763 -40891211 + Lx3C LINE L1 4844 5680 -206 1 1062 207 0 0 0 chr15 62603763 62603786 -40891188 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1 1062 2270 109 125 3 chr15 62603789 62604149 -40890825 - L1_Mus3 LINE L1 -5 6633 6230 1 1062 3995 164 111 15 chr15 62604149 62604257 -40890717 + Lx3C LINE L1 5681 5791 -95 1 1062 2193 47 0 0 chr15 62604245 62604523 -40890451 + L1Md_F2 LINE L1 5309 5586 -297 1 1062 7352 66 21 13 chr15 62604523 62605511 -40889463 + L1Md_F2 LINE L1 5587 6582 0 1 1062 2246 190 8 24 chr15 62605515 62606007 -40888967 + Lx3C LINE L1 5788 6271 -705 1 1062 430 279 72 22 chr15 62606192 62606331 -40888643 + MLT2B1 LTR ERVL 420 565 -2 1 1062 1116 324 93 36 chr15 62606992 62607704 -40887270 - Lx8 LINE L1 -6 7467 6716 1 1062 560 276 37 54 chr15 62607734 62607975 -40886999 - Lx8 LINE L1 -916 6557 6321 1 1062 507 312 40 13 chr15 62608477 62608787 -40886187 - Lx7 LINE L1 -1676 5968 5652 1 1062 780 262 10 46 chr15 62608826 62609022 -40885952 - B3 SINE B2 0 216 28 1 1062 432 286 97 63 chr15 62609027 62609612 -40885362 - Lx7 LINE L1 -667 5489 4834 1 1062 248 77 26 0 chr15 62609715 62609754 -40885220 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1062 267 342 0 0 chr15 62609775 62609854 -40885120 - ID4_ SINE ID -2 81 3 1 1062 513 261 29 0 chr15 62610904 62611042 -40883932 + L1MB7 LINE L1 5877 6018 -166 1 1062 648 322 33 9 chr15 62611080 62611290 -40883684 - ID_B1 SINE B4 -8 216 2 1 1062 411 305 114 21 chr15 62611479 62611811 -40883163 - L1MA4 LINE L1 -370 5930 5568 1 1062 312 229 40 63 chr15 62611824 62611950 -40883024 + L1MB7 LINE L1 6036 6158 -26 1 1062 234 208 0 0 chr15 62613631 62613684 -40881290 + (CAT)n Simple_repeat Simple_repeat 3 55 0 1 1062 733 133 7 7 chr15 62613930 62614066 -40880908 + Lx2B LINE L1 6862 6997 -3 1 1062 432 367 84 20 chr15 62614394 62614644 -40880330 + LTR16A LTR ERVL 90 355 -96 1 1062 450 0 0 0 chr15 62614864 62614914 -40880060 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1062 4684 2 0 0 chr15 62615368 62615881 -40879093 + L1Md_A LINE L1 6070 6582 0 1 1062 21 0 0 0 chr15 62615946 62615967 -40879007 + AT_rich Low_complexity Low_complexity 1 21 0 1 1062 497 16 16 0 chr15 62618971 62619033 -40875941 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 1062 296 339 142 21 chr15 62619492 62619682 -40875292 - Charlie8 DNA MER1_type -2172 256 44 1 1062 239 0 32 0 chr15 62621557 62621588 -40873386 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1062 673 218 81 0 chr15 62622470 62622594 -40872380 + B1_Mur2 SINE Alu 3 136 -13 1 1062 360 0 0 0 chr15 62622594 62622634 -40872340 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 1 1062 471 384 39 12 chr15 62623450 62623785 -40871189 + MLT1B LTR MaLR 43 386 -4 1 1062 642 317 154 15 chr15 62623791 62624248 -40870726 + MLT1B-int LTR MaLR 3 633 -738 1 1062 478 317 125 25 chr15 62624328 62624681 -40870293 - L1MD LINE L1 -1863 4283 3896 1 1062 2160 225 123 160 chr15 62625246 62626294 -40868680 + RMER1B Other Other 45 1053 -13 1 1062 435 38 0 0 chr15 62626554 62626607 -40868367 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1062 1061 340 78 22 chr15 62626703 62627513 -40867461 - Lx8 LINE L1 -246 7227 6373 1 1062 1437 109 33 21 chr15 62627975 62628218 -40866756 - Lx LINE L1 0 6654 6409 1 1062 3906 161 66 1 chr15 62628726 62629509 -40865465 - L1_Mur2 LINE L1 -950 4927 4094 1 1062 506 61 0 0 chr15 62629502 62629568 -40865406 + Lx5 LINE L1 5644 5709 -1341 1 1062 1389 187 35 0 chr15 62629566 62629823 -40865151 + Lx4B LINE L1 6431 6696 -362 1 1062 38 51 0 0 chr15 62629828 62629887 -40865087 + AT_rich Low_complexity Low_complexity 1 59 0 1 1062 642 343 122 28 chr15 62629893 62630181 -40864793 + MTD LTR MaLR 18 332 -87 1 1062 263 204 0 0 chr15 62630231 62630280 -40864694 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 1062 701 121 93 0 chr15 62630897 62631037 -40863937 - Lx LINE L1 0 6654 6502 1 1062 626 264 66 24 chr15 62632376 62632589 -40862385 - Lx8 LINE L1 -956 6517 6296 1 1062 431 299 400 20 chr15 62633702 62633946 -40861028 + MTD LTR MaLR 69 405 -14 1 1062 224 325 34 42 chr15 62634215 62634334 -40860640 + MIR3 SINE MIR 85 202 -6 1 1062 235 343 37 9 chr15 62634441 62634550 -40860424 - L3 LINE CR1 -2 4487 4376 1 1062 1673 178 64 19 chr15 62635254 62635627 -40859347 + Lx2B LINE L1 6611 7000 0 1 1062 843 147 29 0 chr15 62636615 62636751 -40858223 + B1_Mur4 SINE Alu 1 140 -10 1 1062 582 114 0 0 chr15 62636770 62636858 -40858116 + (GAAA)n Simple_repeat Simple_repeat 1 88 0 1 1062 23 0 0 0 chr15 62637047 62637070 -40857904 + AT_rich Low_complexity Low_complexity 1 23 0 1 1062 2612 282 44 19 chr15 62637096 62637953 -40857021 + Lx8 LINE L1 6214 7092 -381 1 1062 1679 107 98 8 chr15 62638202 62638466 -40856508 + Lx2 LINE L1 6710 6997 0 1 1062 414 165 0 0 chr15 62638609 62638712 -40856262 + (CAGA)n Simple_repeat Simple_repeat 4 106 0 1 1062 405 0 0 0 chr15 62639377 62639422 -40855552 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1062 200 385 134 7 chr15 62640236 62640385 -40854589 - MIRb SINE MIR -95 173 6 1 1062 1293 62 67 6 chr15 62641458 62641636 -40853338 - B2_Mm2 SINE B2 -3 192 4 1 1062 25 31 0 0 chr15 62641875 62641907 -40853067 + AT_rich Low_complexity Low_complexity 1 32 0 1 1062 532 319 115 8 chr15 62642208 62642451 -40852523 + B4A SINE B4 2 270 -22 1 1062 267 54 0 0 chr15 62642536 62642573 -40852401 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 1062 606 232 21 21 chr15 62642696 62642841 -40852133 + B1_Mur4 SINE Alu 1 145 -5 1 1062 520 248 9 9 chr15 62643069 62643365 -40851609 + GA-rich Low_complexity Low_complexity 1 295 0 1 1062 225 0 0 0 chr15 62644060 62644085 -40850889 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1 1062 422 313 81 62 chr15 62644556 62644590 -40850384 + B3 SINE B2 2 34 -182 1 1062 801 146 84 6 chr15 62644590 62644756 -40850218 + Lx2A1 LINE L1 6822 7000 -8 1 1062 422 313 81 62 chr15 62644756 62644932 -40850042 + B3 SINE B2 35 216 0 1 1062 262 333 0 19 chr15 62645136 62645240 -40849734 + CT-rich Low_complexity Low_complexity 4 105 0 1 1062 29 47 0 0 chr15 62645387 62645430 -40849544 + AT_rich Low_complexity Low_complexity 1 43 0 1 1062 985 146 264 14 chr15 62645688 62646043 -40848931 + Lx2B LINE L1 6343 6786 -214 1 1062 364 384 7 0 chr15 62646044 62646195 -40848779 - MTEb LTR MaLR -215 164 13 1 1062 2057 309 98 11 chr15 62646205 62646913 -40848061 - MTEb-int LTR MaLR -2 1578 810 1 1062 683 249 50 28 chr15 62646915 62647097 -40847877 - MTEb LTR MaLR -185 194 9 1 1062 255 336 54 9 chr15 62647789 62647900 -40847074 + L2a LINE L2 3303 3418 -8 1 1062 949 90 98 0 chr15 62648135 62648268 -40846706 - B1_Mm SINE Alu 0 147 2 2 1062 385 267 119 64 chr15 62648689 62648925 -40846049 + Lx7 LINE L1 7187 7439 -34 2 1062 482 296 138 79 chr15 62649024 62649314 -40845660 - ORR1E LTR MaLR -39 320 14 2 1062 597 165 132 15 chr15 62649676 62649873 -40845101 - Lx9 LINE L1 -1 7643 7424 2 1062 188 327 77 77 chr15 62650171 62650340 -40844634 + MIRc SINE MIR 43 211 -57 2 1062 23 33 0 0 chr15 62650627 62650657 -40844317 + AT_rich Low_complexity Low_complexity 1 30 0 2 1062 884 74 0 0 chr15 62650657 62650779 -40844195 - L1_Mus1 LINE L1 -4 6563 6442 2 1062 2772 62 3 3 chr15 62650783 62651153 -40843821 + L1_Mus1 LINE L1 6054 6423 -144 2 1062 1109 72 7 0 chr15 62651498 62651637 -40843337 + B1_Mus1 SINE Alu 1 140 -8 2 1063 312 211 0 0 chr15 62656104 62656175 -40838799 + (TA)n Simple_repeat Simple_repeat 1 71 0 2 1063 365 314 97 17 chr15 62656177 62656352 -40838622 + MLT1C LTR MaLR 279 467 0 2 1063 441 0 0 0 chr15 62657624 62657673 -40837301 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1063 318 305 12 0 chr15 62657842 62657924 -40837050 + B4A SINE B4 5 87 -205 2 1063 235 262 167 32 chr15 62657947 62658073 -40836901 + B4A SINE B4 150 292 0 2 1063 306 0 0 0 chr15 62658073 62658107 -40836867 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 1063 2785 53 0 0 chr15 62658126 62658487 -40836487 + L1Md_F2 LINE L1 5225 5585 -298 2 1063 7783 57 11 10 chr15 62658488 62659481 -40835493 + L1Md_F2 LINE L1 5587 6580 -2 2 1063 23 0 0 0 chr15 62659838 62659861 -40835113 + AT_rich Low_complexity Low_complexity 1 23 0 2 1063 192 40 0 0 chr15 62659861 62659886 -40835088 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 2 1063 1443 42 0 41 chr15 62659928 62660124 -40834850 - L1Md_F3 LINE L1 -12 6572 6385 2 1063 506 255 104 97 chr15 62660743 62661021 -40833953 - B4A SINE B4 -11 281 2 2 1063 298 401 60 19 chr15 62661055 62661271 -40833703 + MLT1H LTR MaLR 101 325 -224 2 1063 808 313 62 41 chr15 62663301 62663439 -40831535 - Lx8 LINE L1 0 7473 7341 2 1063 495 0 0 0 chr15 62663439 62663494 -40831480 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 1063 519 17 0 0 chr15 62663494 62663553 -40831421 + (GA)n Simple_repeat Simple_repeat 1 60 0 2 1063 808 313 62 41 chr15 62663553 62663946 -40831028 - Lx8 LINE L1 -133 7340 6931 2 1063 683 334 51 13 chr15 62664254 62664645 -40830329 - Lx8 LINE L1 -157 7316 6911 2 1063 798 109 0 0 chr15 62665307 62665426 -40829548 + (TCCC)n Simple_repeat Simple_repeat 3 121 0 2 1063 310 333 18 0 chr15 62665531 62665642 -40829332 + PB1 SINE Alu 7 119 -8 2 1063 813 197 14 0 chr15 62666613 62666755 -40828219 + B1_Mur2 SINE Alu 1 144 -5 2 1063 615 317 43 52 chr15 62667169 62667379 -40827595 - B4A SINE B4 -14 278 71 2 1063 711 296 18 9 chr15 62668146 62668347 -40826627 + B3A SINE B2 3 202 -14 2 1063 513 92 0 0 chr15 62668464 62668540 -40826434 + (CA)n Simple_repeat Simple_repeat 1 76 0 2 1063 541 128 20 0 chr15 62669148 62669250 -40825724 + (TCCC)n Simple_repeat Simple_repeat 2 105 0 2 1063 225 331 100 23 chr15 62669299 62669429 -40825545 + MIR SINE MIR 109 248 -14 2 1063 968 239 11 67 chr15 62670189 62670458 -40824516 - Lx2B LINE L1 -19 6981 6728 2 1063 603 305 6 22 chr15 62671043 62671221 -40823753 - LTR40a LTR ERVL 0 519 345 2 1063 582 310 102 0 chr15 62671850 62672095 -40822879 - B4 SINE B4 -18 274 5 2 1063 937 278 154 34 chr15 62672139 62672638 -40822336 - Lx9 LINE L1 -27 7617 7059 2 1063 522 129 0 0 chr15 62672781 62672866 -40822108 + (GAA)n Simple_repeat Simple_repeat 3 87 0 2 1063 739 323 23 36 chr15 62674082 62674387 -40820587 + MLT1B LTR MaLR 90 390 0 2 1063 857 62 0 0 chr15 62674455 62674567 -40820407 + B1_Mm SINE Alu 1 112 -35 2 1063 360 59 0 0 chr15 62674572 62674623 -40820351 + (CAAAAA)n Simple_repeat Simple_repeat 3 53 0 2 1063 444 251 40 80 chr15 62674949 62675200 -40819774 - Lx7 LINE L1 -2 7694 7454 2 1063 201 108 0 0 chr15 62675205 62675242 -40819732 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1063 211 203 15 15 chr15 62675242 62675307 -40819667 + GA-rich Low_complexity Low_complexity 4 68 0 2 1063 226 188 0 0 chr15 62675310 62675358 -40819616 - Lx7 LINE L1 -285 7411 7364 2 1063 251 329 0 0 chr15 62675377 62675456 -40819518 + (TG)n Simple_repeat Simple_repeat 2 80 0 2 1063 735 79 24 8 chr15 62675641 62675768 -40819206 + L1Md_F2 LINE L1 6454 6582 0 2 1063 304 362 130 30 chr15 62676024 62676286 -40818688 - L1MDa LINE L1 -4754 1879 1592 2 1063 377 305 29 10 chr15 62676430 62676635 -40818339 - L1MDa LINE L1 -5203 1430 1222 2 1063 287 288 123 0 chr15 62676840 62676913 -40818061 - L1MDa LINE L1 -5649 984 903 2 1063 229 367 54 61 chr15 62678382 62678530 -40816444 + B1_Mur1 SINE Alu 2 148 -1 2 1063 267 140 0 0 chr15 62678988 62679038 -40815936 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1063 291 150 0 0 chr15 62680280 62680340 -40814634 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 1063 340 286 0 0 chr15 62680945 62681022 -40813952 + RMER1B Other Other 415 491 -575 2 1063 2117 243 138 12 chr15 62681023 62681508 -40813466 + RMER1B Other Other 400 930 -136 2 1063 450 0 0 0 chr15 62681508 62681558 -40813416 + (TTA)n Simple_repeat Simple_repeat 2 51 0 2 1063 2117 243 138 12 chr15 62681558 62681664 -40813310 + RMER1B Other Other 931 1065 -1 2 1063 3514 86 8 14 chr15 62681859 62682364 -40812610 + L1_Mus3 LINE L1 6132 6633 -5 2 1063 1665 30 0 0 chr15 62682685 62682884 -40812090 + L1_Mus1 LINE L1 6367 6565 -2 2 1063 204 273 0 0 chr15 62683900 62683944 -40811030 - L4 LINE RTE -691 1338 1295 2 1063 207 0 0 0 chr15 62684741 62684764 -40810210 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1063 255 189 0 0 chr15 62684975 62685028 -40809946 + (CATATA)n Simple_repeat Simple_repeat 4 56 0 2 1063 3617 184 66 44 chr15 62685218 62685534 -40809440 - Lx5 LINE L1 0 7050 6749 2 1063 7314 52 11 3 chr15 62685534 62686453 -40808521 + L1Md_F2 LINE L1 5657 6582 0 2 1063 3617 184 66 44 chr15 62686453 62686908 -40808066 - Lx5 LINE L1 -302 6748 6264 2 1063 3315 191 35 20 chr15 62686881 62687657 -40807317 + Lx5 LINE L1 5486 6279 -771 2 1063 235 265 15 0 chr15 62687833 62687901 -40807073 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 2 1063 901 76 8 0 chr15 62688056 62688188 -40806786 - L1Md_F2 LINE L1 -10 6572 6440 2 1063 464 337 109 62 chr15 62689007 62689067 -40805907 + B4A SINE B4 3 62 -230 2 1063 2917 46 0 26 chr15 62689067 62689416 -40805558 + L1Md_F2 LINE L1 6212 6559 -23 2 1063 3452 18 5 0 chr15 62689416 62689810 -40805164 + MTA_Mm LTR MaLR 1 396 0 2 1063 9365 27 0 1 chr15 62689810 62690909 -40804065 + MTA_Mm-int LTR MaLR 1 1098 0 2 1063 3452 18 5 0 chr15 62690909 62691303 -40803671 + MTA_Mm LTR MaLR 1 396 0 2 1063 2917 46 0 26 chr15 62691303 62691332 -40803642 + L1Md_F2 LINE L1 6560 6580 -2 2 1063 464 337 109 62 chr15 62691332 62691546 -40803428 + B4A SINE B4 63 290 -2 2 1063 351 0 0 0 chr15 62692124 62692163 -40802811 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2 1063 502 65 54 0 chr15 62693713 62693805 -40801169 + (TA)n Simple_repeat Simple_repeat 2 98 0 2 1063 231 320 13 0 chr15 62694452 62694530 -40800444 + MIR SINE MIR 174 252 -10 2 1063 217 68 45 0 chr15 62694568 62694612 -40800362 + (TTTTTG)n Simple_repeat Simple_repeat 4 49 0 2 1063 1078 134 0 63 chr15 62694721 62694928 -40800046 + L1_Mur2 LINE L1 1622 1815 -4062 2 1063 1403 154 48 41 chr15 62694907 62695198 -40799776 - L1_Mur3 LINE L1 -3963 1917 1625 2 1063 14480 159 26 56 chr15 62695263 62696918 -40798056 + L1_Mur2 LINE L1 1910 3569 -2308 2 1063 471 40 0 126 chr15 62696918 62697005 -40797969 + L1_Mus2 LINE L1 6480 6555 -11 2 1063 198 0 0 0 chr15 62697008 62697030 -40797944 + (GGAA)n Simple_repeat Simple_repeat 3 24 0 2 1063 14480 159 26 56 chr15 62697030 62698419 -40796555 + L1_Mur2 LINE L1 3570 4866 -1011 2 1063 312 146 0 0 chr15 62698420 62698468 -40796506 + L1_Mur2 LINE L1 4836 4883 -994 2 1063 6316 206 29 26 chr15 62698464 62699832 -40795142 + Lx5 LINE L1 5664 7036 -14 2 1063 256 221 83 66 chr15 62699975 62700096 -40794878 + L1M5 LINE L1 2710 2832 -3314 2 1063 349 169 14 40 chr15 62700313 62700387 -40794587 + B3 SINE B2 145 216 0 2 1063 646 237 30 15 chr15 62700426 62700559 -40794415 - B3 SINE B2 -80 136 2 2 1063 21 36 0 0 chr15 62700566 62700594 -40794380 + AT_rich Low_complexity Low_complexity 1 28 0 2 1063 913 313 89 35 chr15 62700817 62701188 -40793786 + MTD LTR MaLR 9 399 -20 2 1063 183 42 0 0 chr15 62701323 62701347 -40793627 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 1063 4791 30 2 7 chr15 62701357 62701926 -40793048 - L1Md_F3 LINE L1 0 6584 6019 2 1063 1194 48 0 0 chr15 62701926 62702073 -40792901 + L1Md_F3 LINE L1 5864 6010 -574 2 1063 239 323 0 0 chr15 62702161 62702223 -40792751 + (CGTG)n Simple_repeat Simple_repeat 2 63 0 2 1063 462 18 0 0 chr15 62704394 62704449 -40790525 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1063 302 292 31 20 chr15 62704450 62704548 -40790426 - RMER15 LTR ERVL -138 437 339 2 1063 853 306 64 43 chr15 62704607 62705000 -40789974 - RMER15-int LTR ERVL -168 4831 4431 2 1063 300 257 0 28 chr15 62705001 62705073 -40789901 - Lx8 LINE L1 -1041 6432 6363 2 1063 351 0 0 0 chr15 62705400 62705439 -40789535 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1063 2041 342 49 48 chr15 62705849 62706964 -40788010 - RMER15-int LTR ERVL -3357 1642 525 2 1063 1039 51 0 0 chr15 62706964 62707102 -40787872 - L1_Mus1 LINE L1 -2 6565 6428 2 1063 2041 342 49 48 chr15 62707102 62707155 -40787819 - RMER15-int LTR ERVL -4475 524 473 2 1063 200 250 18 0 chr15 62707733 62707789 -40787185 + (TTTA)n Simple_repeat Simple_repeat 1 57 0 2 1063 3907 196 26 30 chr15 62708469 62709273 -40785701 + Lx5 LINE L1 6250 7050 0 2 1063 504 0 0 0 chr15 62710259 62710315 -40784659 + (TC)n Simple_repeat Simple_repeat 1 56 0 2 1063 268 94 38 0 chr15 62710315 62710367 -40784607 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 1063 342 234 28 35 chr15 62710382 62710524 -40784450 + (CA)n Simple_repeat Simple_repeat 1 141 0 2 1063 247 185 98 12 chr15 62710531 62710613 -40784361 + L1MEc LINE L1 1791 1879 -4521 2 1063 468 331 65 36 chr15 62710680 62711011 -40783963 + L1MEc LINE L1 2027 2365 -4050 2 1063 7946 172 16 14 chr15 62711322 62713133 -40781841 + Lx5 LINE L1 5234 7050 0 2 1063 1282 41 17 6 chr15 62713465 62713638 -40781336 + L1Md_F3 LINE L1 6410 6584 0 2 1063 634 319 157 22 chr15 62713678 62714258 -40780716 + L1MEc LINE L1 3316 3973 -2346 2 1063 5076 43 0 5 chr15 62714540 62715166 -40779808 + L1Md_F2 LINE L1 5958 6580 -2 2 1063 1291 251 91 32 chr15 62715759 62716134 -40778840 + Lx2B LINE L1 6596 6992 -8 2 1063 24 0 0 0 chr15 62719008 62719032 -40775942 + AT_rich Low_complexity Low_complexity 1 24 0 2 1063 233 341 0 0 chr15 62719511 62719588 -40775386 - MIRb SINE MIR -80 188 112 2 1063 240 390 9 48 chr15 62719622 62719727 -40775247 - MER20 DNA MER1_type -1 218 118 2 1063 1796 221 210 22 chr15 62719748 62720248 -40774726 + RMER19B LTR ERVK 301 894 -8 2 1063 444 37 0 0 chr15 62720445 62720499 -40774475 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 1063 304 364 14 35 chr15 62720554 62720699 -40774275 - B4A SINE B4 -147 145 4 2 1063 704 71 0 10 chr15 62721977 62722077 -40772897 + (GAAA)n Simple_repeat Simple_repeat 3 101 0 3 1063 210 109 0 80 chr15 62722136 62722186 -40772788 + A-rich Low_complexity Low_complexity 4 49 0 3 1063 503 304 156 20 chr15 62722216 62722568 -40772406 - L2 LINE L2 -1583 1836 1437 3 1063 259 342 127 30 chr15 62722951 62723117 -40771857 + MLT1D LTR MaLR 280 461 -44 3 1063 727 147 21 0 chr15 62723368 62723511 -40771463 + (TAGA)n Simple_repeat Simple_repeat 2 147 0 3 1063 557 208 0 6 chr15 62723540 62723714 -40771260 + GA-rich Low_complexity Low_complexity 2 174 0 3 1063 204 243 29 0 chr15 62723715 62723785 -40771189 + (CAGAGA)n Simple_repeat Simple_repeat 6 77 0 3 1063 918 177 28 6 chr15 62723967 62724143 -40770831 + ORR1B2 LTR MaLR 188 367 0 3 1063 524 271 56 56 chr15 62724149 62724364 -40770610 - Lx9 LINE L1 -453 7191 6977 3 1063 902 247 86 31 chr15 62724355 62724740 -40770234 + L1_Rod LINE L1 5128 5533 -314 3 1063 2759 119 7 30 chr15 62724744 62725205 -40769769 + Lx LINE L1 6153 6602 -52 3 1063 335 242 0 11 chr15 62725211 62725303 -40769671 + L1_Rod LINE L1 5543 5633 -214 3 1063 519 221 0 0 chr15 62725834 62725992 -40768982 + GA-rich Low_complexity Low_complexity 3 160 0 3 1063 704 329 107 45 chr15 62726313 62726733 -40768241 + MLT2F LTR ERVL 205 650 -13 3 1063 441 392 0 20 chr15 62726866 62727012 -40767962 - B1F SINE Alu -6 143 1 3 1063 293 322 0 22 chr15 62728622 62728711 -40766263 - MLT2F LTR ERVL -561 102 16 3 1063 465 336 8 0 chr15 62730231 62730353 -40764621 - RSINE1 SINE B4 -35 130 8 3 1063 198 287 77 44 chr15 62731065 62731156 -40763818 + L4 LINE RTE 1342 1435 -594 3 1063 2769 68 0 8 chr15 62731862 62732233 -40762741 + L1Md_F2 LINE L1 6214 6581 -1 3 1063 305 396 48 18 chr15 62732233 62732400 -40762574 + MER58A DNA MER1_type 4 175 -49 3 1063 388 239 67 58 chr15 62732631 62732751 -40762223 - MTD LTR MaLR -18 401 281 3 1063 630 310 45 34 chr15 62732805 62733069 -40761905 - MTD LTR MaLR -149 270 4 3 1063 2319 232 34 7 chr15 62733269 62733880 -40761094 - L1MA6 LINE L1 -272 6028 5401 3 1063 221 182 0 18 chr15 62735486 62735542 -40759432 + CT-rich Low_complexity Low_complexity 2 56 0 3 1063 497 317 53 120 chr15 62737130 62737431 -40757543 - MLT1F2 LTR MaLR -54 600 285 3 1063 242 370 0 0 chr15 62737508 62737589 -40757385 - MLT1F2 LTR MaLR -476 84 4 3 1063 1170 68 0 7 chr15 62738007 62738155 -40756819 - B1_Mus2 SINE Alu 0 147 1 3 1063 3618 71 21 0 chr15 62738345 62738821 -40756153 - L1_Mus3 LINE L1 -7 6631 6146 3 1063 1406 250 55 3 chr15 62738847 62739192 -40755782 + MTD LTR MaLR 1 363 -56 3 1063 270 337 9 84 chr15 62739737 62739844 -40755130 + MIR SINE MIR 33 131 -77 3 1063 324 0 0 0 chr15 62740902 62740938 -40754036 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 1063 832 90 0 33 chr15 62740942 62741092 -40753882 + (GGAGA)n Simple_repeat Simple_repeat 2 146 0 3 1063 648 257 15 56 chr15 62741099 62741297 -40753677 - Lx9 LINE L1 -476 7168 6979 3 1063 1784 237 20 0 chr15 62741944 62742302 -40752672 - ORR1D1 LTR MaLR 0 374 10 3 1063 3692 105 52 2 chr15 62743031 62743586 -40751388 + Lx3_Mus LINE L1 6426 7008 -1 3 1063 939 303 104 13 chr15 62743595 62743903 -40751071 + MLT1A0 LTR MaLR 30 365 0 3 1063 229 317 59 0 chr15 62743999 62744100 -40750874 + Lx8 LINE L1 7041 7147 -326 3 1063 627 246 32 0 chr15 62744100 62744226 -40750748 + B3 SINE B2 1 130 -86 3 1063 828 284 59 64 chr15 62744244 62744601 -40750373 + Lx8 LINE L1 7119 7473 0 3 1063 606 140 0 0 chr15 62744774 62744874 -40750100 + (TA)n Simple_repeat Simple_repeat 2 101 0 3 1063 1244 220 16 8 chr15 62746669 62746926 -40748048 + Lx5 LINE L1 6787 7045 -5 3 1063 1001 323 27 21 chr15 62747768 62748141 -40746833 + MLT1A1 LTR MaLR 25 399 -9 3 1063 269 270 22 11 chr15 62748251 62748341 -40746633 + L1MC4 LINE L1 6494 6584 -1201 3 1063 369 307 112 37 chr15 62748475 62748878 -40746096 + L1MC4 LINE L1 6912 7344 -698 3 1063 680 257 67 10 chr15 62749273 62749466 -40745508 - B4A SINE B4 -87 205 2 3 1063 239 70 164 27 chr15 62750461 62750534 -40744440 + (TTCA)n Simple_repeat Simple_repeat 4 86 0 3 1063 564 15 0 0 chr15 62750534 62750599 -40744375 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 1063 378 323 72 31 chr15 62750993 62751188 -40743786 - MIRc SINE MIR -19 249 47 3 1063 477 0 0 0 chr15 62751333 62751386 -40743588 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1063 333 0 0 0 chr15 62751524 62751561 -40743413 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1063 209 317 19 30 chr15 62752623 62752744 -40742230 - MIR SINE MIR -1 267 145 3 1063 250 376 24 8 chr15 62752863 62752989 -40741985 + MLT1J1 LTR MaLR 15 142 -302 3 1063 288 233 0 0 chr15 62753415 62753488 -40741486 + (TA)n Simple_repeat Simple_repeat 1 73 0 3 1063 2548 26 0 0 chr15 62753554 62753860 -40741114 + L1Md_F2 LINE L1 5281 5586 -297 3 1063 7727 60 1 5 chr15 62753860 62754848 -40740126 + L1Md_F2 LINE L1 5587 6570 -12 3 1063 220 313 58 29 chr15 62754858 62754927 -40740047 - B3A SINE B2 -127 71 1 3 1063 648 59 0 0 chr15 62755935 62756020 -40738954 + (TC)n Simple_repeat Simple_repeat 1 85 0 3 1063 234 0 0 0 chr15 62756020 62756045 -40738929 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1063 325 339 42 0 chr15 62756067 62756232 -40738742 - Lx9 LINE L1 -217 7427 7256 3 1063 331 330 0 0 chr15 62756256 62756371 -40738603 - Lx9 LINE L1 -452 7192 7078 3 1063 468 333 0 9 chr15 62759123 62759235 -40735739 - PB1D10 SINE Alu -6 111 1 3 1063 423 352 39 14 chr15 62759339 62759624 -40735350 + B4A SINE B4 1 292 0 3 1063 213 39 0 0 chr15 62759625 62759651 -40735323 + (CATATA)n Simple_repeat Simple_repeat 3 28 0 3 1063 349 122 0 0 chr15 62759653 62759702 -40735272 + HAL1-3A_ME LINE L1 1975 2023 -835 3 1063 21 36 0 0 chr15 62759794 62759822 -40735152 + AT_rich Low_complexity Low_complexity 1 28 0 3 1063 1873 98 54 3 chr15 62760623 62760981 -40733993 - L1_Mus3 LINE L1 -377 6259 5832 3 1063 2498 101 33 0 chr15 62760982 62761348 -40733626 + L1_Mus3 LINE L1 6254 6631 -7 3 1063 26 50 0 0 chr15 62761348 62761388 -40733586 + AT_rich Low_complexity Low_complexity 1 40 0 3 1063 3259 39 3 0 chr15 62761554 62761942 -40733032 + L1Md_F2 LINE L1 6180 6568 -14 3 1063 1962 46 0 4 chr15 62762041 62762283 -40732691 + L1Md_F3 LINE L1 6343 6583 -1 3 1063 211 323 95 73 chr15 62762929 62763066 -40731908 - MIRb SINE MIR -59 203 64 3 1063 360 136 17 0 chr15 62763676 62763735 -40731239 + HAL1-3A_ME LINE L1 1976 2035 -823 3 1063 1723 157 14 15 chr15 62765001 62765316 -40729658 + ORR1A2 LTR MaLR 47 374 0 3 1063 483 18 0 0 chr15 62769146 62769202 -40725772 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 1063 691 276 150 4 chr15 62770157 62770437 -40724537 + Lx8 LINE L1 7133 7453 -20 3 1063 180 152 0 0 chr15 62770439 62770472 -40724502 + (TATG)n Simple_repeat Simple_repeat 2 34 0 3 1063 381 93 0 0 chr15 62771328 62771382 -40723592 + (A)n Simple_repeat Simple_repeat 1 54 0 3 1063 1280 63 0 28 chr15 62771464 62771644 -40723330 + L1Md_F2 LINE L1 6392 6566 -16 3 1063 490 357 13 7 chr15 62771990 62772145 -40722829 + MLT2B1 LTR ERVL 348 503 -64 3 1063 641 55 0 11 chr15 62774708 62774799 -40720175 + (TC)n Simple_repeat Simple_repeat 2 91 0 3 1063 315 0 0 0 chr15 62774799 62774833 -40720141 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 1063 615 27 0 0 chr15 62774833 62774905 -40720069 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 1063 21 36 0 0 chr15 62775262 62775290 -40719684 + AT_rich Low_complexity Low_complexity 1 28 0 3 1063 538 309 27 0 chr15 62775510 62775659 -40719315 - RSINE1 SINE B4 -8 157 5 3 1063 1193 327 102 27 chr15 62775807 62776435 -40718539 + Tigger9a DNA Tigger 54 728 -4 3 1063 411 320 127 60 chr15 62776716 62777074 -40717900 + MLT1B LTR MaLR 7 374 0 3 1063 394 330 6 140 chr15 62777307 62777525 -40717449 + B3A SINE B2 2 199 -17 3 1063 352 337 13 90 chr15 62778638 62778886 -40716088 + MLT1E2 LTR MaLR 1 233 -272 3 1063 321 302 19 39 chr15 62778867 62779022 -40715952 + MLT1E2 LTR MaLR 354 505 0 3 1063 689 128 78 0 chr15 62779057 62779144 -40715830 + RMER17B LTR ERVK 312 400 -558 3 1063 435 63 0 0 chr15 62779144 62779207 -40715767 + (TCTCTG)n Simple_repeat Simple_repeat 4 66 0 3 1063 689 183 79 57 chr15 62779207 62779333 -40715641 + RMER17B LTR ERVK 401 568 -338 3 1063 398 207 24 0 chr15 62779432 62779514 -40715460 + ORR1D-int LTR MaLR 1098 1181 -189 3 1063 23 33 0 0 chr15 62779775 62779805 -40715169 + AT_rich Low_complexity Low_complexity 1 30 0 3 1063 2308 69 72 0 chr15 62780615 62780934 -40714040 - L1_Mus2 LINE L1 0 6566 6225 3 1063 610 309 86 40 chr15 62781010 62781147 -40713827 - L1M2 LINE L1 -2071 4069 3907 3 1063 2175 19 110 0 chr15 62781147 62781410 -40713564 + RLTR10B LTR ERVK 1 292 0 3 1063 619 299 92 42 chr15 62781410 62781972 -40713002 - L1M2 LINE L1 -1974 3906 3312 3 1063 808 332 85 30 chr15 62782642 62782805 -40712169 + RMER5 LTR ERV1 33 210 -324 3 1063 563 283 25 40 chr15 62782805 62783004 -40711970 - B3A SINE B2 0 198 3 3 1063 808 332 85 30 chr15 62783004 62783300 -40711674 + RMER5 LTR ERV1 211 516 -18 3 132 2366 106 6 0 chr15 62783370 62783701 -40711273 - Lx3_Mus LINE L1 0 7009 6677 3 1064 1416 95 5 0 chr15 62783701 62783911 -40711063 + Lx3_Mus LINE L1 6503 6713 -296 3 1064 1649 168 27 76 chr15 62787146 62787613 -40707361 + RMER17C LTR ERVK 16 437 -521 3 1064 595 232 130 0 chr15 62788076 62788214 -40706760 - B3 SINE B2 -11 205 50 3 1064 245 325 112 25 chr15 62788782 62788943 -40706031 - ORR1E LTR MaLR -165 194 20 3 1064 492 291 82 29 chr15 62789073 62789461 -40705513 - LTR48 LTR ERV1 -40 747 154 3 1064 198 0 0 0 chr15 62789542 62789564 -40705410 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 3 1064 698 340 83 46 chr15 62789586 62789913 -40705061 - MER58B DNA MER1_type -1 340 2 3 1064 3677 200 98 78 chr15 62790125 62790860 -40704114 + RLTR25B LTR ERVK 1 809 -219 3 1064 234 81 0 0 chr15 62790860 62790897 -40704077 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 3 1064 3677 200 98 78 chr15 62790897 62791168 -40703806 + RLTR25B LTR ERVK 810 1027 -1 3 1064 229 292 52 10 chr15 62791254 62791351 -40703623 - MER34 LTR ERV1 -65 477 377 3 1064 308 273 136 32 chr15 62791659 62791784 -40703190 - LTR48 LTR ERV1 -649 138 1 3 1064 21 0 0 0 chr15 62791807 62791828 -40703146 + AT_rich Low_complexity Low_complexity 1 21 0 3 1064 954 272 108 50 chr15 62792021 62792362 -40702612 + MTEa LTR MaLR 19 379 0 4 1064 183 80 0 0 chr15 62793303 62793328 -40701646 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1064 270 0 0 0 chr15 62793344 62793374 -40701600 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1064 1208 98 49 5 chr15 62793488 62793672 -40701302 - B2_Mm2 SINE B2 -1 194 3 4 1064 963 360 83 96 chr15 62795549 62797067 -40697907 + MLT-int LTR MaLR 5 1726 -9 4 1064 790 192 168 20 chr15 62797074 62797271 -40697703 - URR1A DNA MER1_type 0 226 1 4 1064 192 254 28 69 chr15 62797664 62797736 -40697238 - MIR3 SINE MIR -31 177 109 4 1064 318 295 23 8 chr15 62797920 62798050 -40696924 + Looper DNA PiggyBac 1301 1432 -126 4 1064 191 114 0 28 chr15 62798548 62798584 -40696390 + (GAAAA)n Simple_repeat Simple_repeat 5 39 0 4 1064 321 26 0 0 chr15 62798668 62798706 -40696268 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1064 373 295 24 8 chr15 62798735 62798858 -40696116 - Lx7 LINE L1 -412 7284 7160 4 1064 447 228 0 0 chr15 62799377 62799500 -40695474 + CT-rich Low_complexity Low_complexity 3 125 0 4 1064 25 0 0 0 chr15 62799620 62799645 -40695329 + AT_rich Low_complexity Low_complexity 1 25 0 4 1064 304 307 29 19 chr15 62800417 62800520 -40694454 + B1_Mur1 SINE Alu 10 113 -36 4 1064 27 29 0 0 chr15 62802096 62802130 -40692844 + AT_rich Low_complexity Low_complexity 1 34 0 4 1064 6081 137 1 3 chr15 62802560 62803556 -40691418 - L1_Mus3 LINE L1 -2 5881 4888 4 1064 3992 70 84 0 chr15 62803554 62804124 -40690850 + L1_Mus3 LINE L1 5894 6511 -127 4 1064 3515 70 0 0 chr15 62804122 62804609 -40690365 + L1_Mm LINE L1 4243 4729 -1154 4 1064 8040 128 35 13 chr15 62804635 62806663 -40688311 + L1Md_F LINE L1 599 2613 -3270 4 1064 4699 88 2 3 chr15 62806663 62807304 -40687670 + L1_Mus2 LINE L1 5927 6566 0 4 1064 338 310 26 72 chr15 62807407 62807560 -40687414 - MER2B DNA MER2_type -6 330 185 4 1064 3515 54 2 0 chr15 62807679 62808123 -40686851 - L1Md_F2 LINE L1 0 6582 6138 4 1064 214 0 0 98 chr15 62809037 62809088 -40685886 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 4 1064 678 339 97 19 chr15 62809089 62809408 -40685566 - MLT1E3 LTR MaLR -25 599 256 4 1064 210 329 62 25 chr15 62809645 62809726 -40685248 - B4A SINE B4 -207 85 2 4 1064 332 294 68 58 chr15 62809853 62810059 -40684915 - Lx8 LINE L1 -9 7464 7257 4 1064 245 53 53 0 chr15 62811583 62811621 -40683353 + (TATG)n Simple_repeat Simple_repeat 2 41 0 4 1064 564 285 236 68 chr15 62811677 62811968 -40683006 - MTEb LTR MaLR -37 342 3 4 1064 243 0 0 0 chr15 62813613 62813640 -40681334 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1064 480 245 0 10 chr15 62813786 62813885 -40681089 + B1_Mur2 SINE Alu 50 147 -2 4 1064 224 336 14 0 chr15 62814234 62814377 -40680597 + (TA)n Simple_repeat Simple_repeat 1 145 0 4 1064 2287 38 0 0 chr15 62814378 62814666 -40680308 + L1Md_F2 LINE L1 5299 5586 -297 4 1064 7843 50 7 20 chr15 62814673 62815681 -40679293 + L1Md_F2 LINE L1 5587 6581 -1 4 1064 265 356 94 72 chr15 62817624 62817942 -40677032 + L2b LINE L2 3047 3371 -4 4 1064 183 42 0 0 chr15 62818076 62818100 -40676874 + (TCTG)n Simple_repeat Simple_repeat 2 25 0 4 1064 629 275 103 109 chr15 62819304 62819635 -40675339 + ORR1E LTR MaLR 29 357 -2 4 1064 189 194 0 0 chr15 62820123 62820154 -40674820 + L2 LINE L2 111 141 -3278 4 1064 284 295 32 76 chr15 62820171 62820329 -40674645 + RMER4B LTR ERVK 12 162 -423 4 1064 739 44 0 0 chr15 62821951 62822041 -40672933 + BC1_Mm scRNA scRNA 1 90 -62 4 1064 810 181 14 0 chr15 62822131 62822275 -40672699 + B1_Mur1 SINE Alu 4 149 0 4 1064 258 32 0 0 chr15 62822329 62822360 -40672614 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1064 243 88 0 0 chr15 62822830 62822864 -40672110 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1064 419 176 27 34 chr15 62823025 62823172 -40671802 + CT-rich Low_complexity Low_complexity 5 150 0 4 1064 1272 277 20 42 chr15 62823781 62824135 -40670839 - ORR1E LTR MaLR -4 355 10 4 1064 314 333 48 0 chr15 62826296 62826422 -40668552 - MIR SINE MIR -59 203 72 4 1064 459 316 9 108 chr15 62826974 62827187 -40667787 - B3A SINE B2 0 198 1 4 1064 558 365 75 11 chr15 62827370 62827800 -40667174 - MER74A LTR ERVL 0 558 89 4 1064 2815 141 24 39 chr15 62827801 62828312 -40666662 + Lx LINE L1 6149 6651 -3 4 1064 180 176 111 56 chr15 62829849 62829921 -40665053 + L4 LINE RTE 852 927 -1102 4 1064 553 72 19 76 chr15 62830932 62831037 -40663937 - L1_Mus3 LINE L1 -12 6626 6528 4 1064 1120 72 0 7 chr15 62831037 62831191 -40663783 + L1_Mus3 LINE L1 6275 6427 -209 4 1064 320 317 76 29 chr15 62832239 62832515 -40662459 - L1M5 LINE L1 -1310 4836 4548 4 1064 29 28 0 0 chr15 62832732 62832768 -40662206 + AT_rich Low_complexity Low_complexity 1 36 0 4 1064 2160 202 109 2 chr15 62833043 62833519 -40661455 - RLTR11A2 LTR ERVK 0 527 1 4 1064 615 117 0 0 chr15 62833546 62833640 -40661334 + (GGGA)n Simple_repeat Simple_repeat 1 94 0 4 1064 402 22 152 11 chr15 62833634 62833726 -40661248 + GA-rich Low_complexity Low_complexity 2 106 0 4 1064 1711 188 59 46 chr15 62834145 62834518 -40660456 - ORR1C1 LTR MaLR 0 378 1 4 1064 739 349 83 25 chr15 62834564 62834890 -40660084 + ORR1E LTR MaLR 10 354 -5 4 1064 1013 295 171 14 chr15 62834937 62835511 -40659463 + L1M4c LINE L1 37 700 -5684 4 1064 1123 275 58 48 chr15 62835631 62836200 -40658774 + L1M4c LINE L1 1236 1810 -4574 4 1064 321 299 40 11 chr15 62836306 62836482 -40658492 + L1M4c LINE L1 2113 2293 -4091 4 1064 315 296 36 18 chr15 62836491 62836601 -40658373 - MLT1A1 LTR MaLR -103 305 194 4 1064 573 196 137 50 chr15 62836727 62836888 -40658086 - B3 SINE B2 -5 211 37 4 1064 341 103 24 64 chr15 62837608 62837733 -40657241 + T-rich Low_complexity Low_complexity 1 120 0 4 1064 207 0 0 0 chr15 62837750 62837773 -40657201 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 4 1064 1083 41 0 46 chr15 62837773 62837916 -40657058 - B1_Mus2 SINE Alu -9 138 3 4 1064 218 245 0 0 chr15 62838383 62838432 -40656542 + G-rich Low_complexity Low_complexity 1 49 0 4 1064 22 56 0 0 chr15 62839314 62839350 -40655624 + AT_rich Low_complexity Low_complexity 1 36 0 4 1064 2923 112 47 0 chr15 62839455 62839882 -40655092 - Lx LINE L1 -6 6648 6202 4 1064 735 147 157 5 chr15 62840543 62840741 -40654233 + Lx9 LINE L1 7416 7643 -1 4 1064 205 324 64 29 chr15 62841401 62841541 -40653433 + MIR SINE MIR 118 262 0 4 1064 3385 142 19 134 chr15 62842053 62842378 -40652596 + RMER17A LTR ERVK 1 313 -438 4 1064 231 36 0 0 chr15 62842378 62842406 -40652568 + (TCTCC)n Simple_repeat Simple_repeat 1 28 0 4 1064 3385 142 19 134 chr15 62842406 62842924 -40652050 + RMER17A LTR ERVK 314 747 -4 4 1064 816 125 0 0 chr15 62843821 62843949 -40651025 + (TC)n Simple_repeat Simple_repeat 1 128 0 4 1064 207 0 0 0 chr15 62845943 62845966 -40649008 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1064 325 388 56 19 chr15 62846121 62846334 -40648640 + MLT1K LTR MaLR 47 267 -328 4 1064 505 394 68 20 chr15 62846755 62847314 -40647660 - L2 LINE L2 -352 3067 2482 4 1064 522 0 0 0 chr15 62847671 62847729 -40647245 + (TC)n Simple_repeat Simple_repeat 2 59 0 4 1064 446 0 19 0 chr15 62847729 62847782 -40647192 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1064 698 275 42 14 chr15 62847791 62848005 -40646969 - B4 SINE B4 -18 274 55 4 1064 212 59 0 29 chr15 62848680 62848715 -40646259 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1064 594 79 0 0 chr15 62849253 62849342 -40645632 + (TC)n Simple_repeat Simple_repeat 2 90 0 4 1064 465 19 0 0 chr15 62849342 62849395 -40645579 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 1064 456 195 11 0 chr15 62850305 62850392 -40644582 + Lx9 LINE L1 7190 7277 -367 4 1064 373 208 333 0 chr15 62850439 62850598 -40644376 + Lx9 LINE L1 7425 7636 -8 4 1064 760 307 92 47 chr15 62850771 62851215 -40643759 + MLT1C LTR MaLR 4 467 0 4 1064 5649 99 5 28 chr15 62852980 62853831 -40641143 - L1_Mus3 LINE L1 0 6638 5808 4 1064 5488 120 16 3 chr15 62853832 62854726 -40640248 + L1_Mus3 LINE L1 4889 5793 -90 4 1064 1165 61 0 13 chr15 62855345 62855483 -40639491 + B1_Mus2 SINE Alu 1 138 -9 4 1064 216 0 0 0 chr15 62855483 62855507 -40639467 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 4 1064 183 114 0 0 chr15 62855517 62855552 -40639422 + (A)n Simple_repeat Simple_repeat 1 35 0 4 1064 267 31 0 0 chr15 62855877 62855909 -40639065 + (CTG)n Simple_repeat Simple_repeat 2 33 0 4 1064 540 0 0 0 chr15 62855948 62856008 -40638966 + (TTC)n Simple_repeat Simple_repeat 3 62 0 4 1064 182 108 0 51 chr15 62856029 62856068 -40638906 + (TCTCTG)n Simple_repeat Simple_repeat 2 38 0 4 1064 2528 301 42 58 chr15 62856479 62857445 -40637529 + Lx7 LINE L1 6119 7058 -638 4 1064 918 92 0 0 chr15 62857445 62857575 -40637399 + (TA)n Simple_repeat Simple_repeat 2 131 0 4 1064 261 0 0 0 chr15 62857576 62857605 -40637369 + (GA)n Simple_repeat Simple_repeat 1 29 0 4 1064 2528 301 42 58 chr15 62857605 62857853 -40637121 + Lx7 LINE L1 7059 7316 -380 4 1064 1041 196 0 5 chr15 62857881 62858071 -40636903 - Lx5 LINE L1 -109 6941 6753 4 1064 560 121 11 0 chr15 62858059 62858150 -40636824 + Lx4B LINE L1 5831 5922 -1136 4 1064 22 35 0 0 chr15 62858237 62858266 -40636708 + AT_rich Low_complexity Low_complexity 1 29 0 4 1064 30833 67 6 3 chr15 62859354 62864191 -40630783 + L1Md_F2 LINE L1 596 5443 -440 4 1064 6956 56 7 10 chr15 62864191 62865096 -40629878 + L1Md_F2 LINE L1 5680 6581 -1 4 1064 30833 71 7 3 chr15 62865096 62865230 -40629744 + L1Md_F2 LINE L1 5444 5584 -299 4 1064 8027 44 12 0 chr15 62865231 62866201 -40628773 + L1Md_F2 LINE L1 5587 6568 -14 4 1064 513 254 182 22 chr15 62866494 62866675 -40628299 + B3 SINE B2 7 216 0 4 1064 267 31 0 0 chr15 62867148 62867180 -40627794 + (TTG)n Simple_repeat Simple_repeat 1 32 0 4 1064 522 57 0 0 chr15 62868785 62868855 -40626119 + (TG)n Simple_repeat Simple_repeat 2 71 0 4 1064 699 90 0 0 chr15 62871065 62871165 -40623809 + (GA)n Simple_repeat Simple_repeat 1 100 0 4 1064 227 200 20 0 chr15 62871249 62871299 -40623675 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1064 237 388 48 34 chr15 62871367 62871465 -40623509 - MER20 DNA MER1_type -6 213 118 5 1064 471 45 15 0 chr15 62871465 62871532 -40623442 + L1_Mus2 LINE L1 6499 6566 0 5 1064 237 388 48 34 chr15 62871532 62871641 -40623333 - MER20 DNA MER1_type -102 117 4 5 1064 267 103 0 0 chr15 62871845 62871884 -40623090 + (TCC)n Simple_repeat Simple_repeat 2 40 0 5 1064 229 349 0 44 chr15 62872244 62872358 -40622616 - MER94 DNA AcHobo -14 120 12 5 1064 226 184 0 39 chr15 62873495 62873546 -40621428 + (CAGAGA)n Simple_repeat Simple_repeat 2 50 0 5 1064 202 267 0 0 chr15 62873976 62874021 -40620953 + GA-rich Low_complexity Low_complexity 3 47 0 5 1064 246 265 29 29 chr15 62874038 62874108 -40620866 + MER63D DNA AcHobo 314 383 -678 5 1064 354 324 0 76 chr15 62874545 62874702 -40620272 - MER46C DNA MER2_type -48 290 146 5 1064 680 114 74 30 chr15 62875423 62875558 -40619416 - L1Md_T LINE L1 0 6582 6442 5 1064 198 302 0 0 chr15 62875908 62875951 -40619023 - MIR SINE MIR -31 231 189 5 1064 768 215 18 106 chr15 62875962 62876180 -40618794 - B3 SINE B2 -6 210 12 5 1064 594 68 0 0 chr15 62876395 62876483 -40618491 + (T)n Simple_repeat Simple_repeat 1 88 0 5 1064 198 331 89 15 chr15 62876534 62876669 -40618305 - MIRb SINE MIR -121 147 3 5 1064 1962 135 35 0 chr15 62878071 62878382 -40616592 - ORR1A2 LTR MaLR -5 322 1 5 1064 198 0 0 0 chr15 62878850 62878872 -40616102 + (TCCC)n Simple_repeat Simple_repeat 1 22 0 5 1064 225 83 0 0 chr15 62879432 62879468 -40615506 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 5 1064 4843 38 0 5 chr15 62879669 62880249 -40614725 - L1Md_F2 LINE L1 -2 6580 6004 5 1064 210 71 0 0 chr15 62880530 62880558 -40614416 + (TCCA)n Simple_repeat Simple_repeat 3 30 0 5 1064 234 184 0 0 chr15 62881373 62881422 -40613552 + T-rich Low_complexity Low_complexity 1 49 0 5 1064 417 248 0 0 chr15 62882031 62882144 -40612830 + (TG)n Simple_repeat Simple_repeat 2 114 0 5 1064 569 306 38 19 chr15 62882427 62882637 -40612337 + B3 SINE B2 1 214 -2 5 1064 520 279 0 0 chr15 62882750 62882854 -40612120 - MER81 DNA AcHobo -10 104 1 5 1064 228 214 0 0 chr15 62882942 62882998 -40611976 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1064 222 180 40 0 chr15 62883648 62883698 -40611276 + (CATA)n Simple_repeat Simple_repeat 2 53 0 5 1064 196 273 0 35 chr15 62883705 62883762 -40611212 + L4 LINE RTE 1968 2022 -7 5 1064 321 135 0 0 chr15 62885439 62885491 -40609483 + (CAA)n Simple_repeat Simple_repeat 1 52 0 5 1064 767 189 7 14 chr15 62886122 62886267 -40608707 - B1_Mus2 SINE Alu -3 144 1 5 1064 190 322 83 17 chr15 62886315 62886375 -40608599 + L2a LINE L2 3316 3379 -47 5 1064 197 158 0 50 chr15 62886366 62886406 -40608568 + L3 LINE CR1 4337 4374 -115 5 1064 5454 107 20 27 chr15 62886698 62888311 -40606663 + L1_Mus2 LINE L1 5033 6582 0 5 1064 421 359 87 5 chr15 62888884 62889091 -40605883 - MER58A DNA MER1_type 0 224 1 5 1064 21 36 0 0 chr15 62889199 62889227 -40605747 + AT_rich Low_complexity Low_complexity 1 28 0 5 1064 246 211 10 87 chr15 62889305 62889409 -40605565 + A-rich Low_complexity Low_complexity 5 100 0 5 1064 739 311 18 18 chr15 62889477 62889755 -40605219 - Lx7 LINE L1 -440 7256 6979 5 1064 23 54 0 0 chr15 62890582 62890619 -40604355 + AT_rich Low_complexity Low_complexity 1 37 0 5 1064 511 328 89 63 chr15 62890630 62890660 -40604314 - L1MC4 LINE L1 -287 7755 7726 5 1064 1348 87 0 39 chr15 62890660 62890863 -40604111 + B2_Mm2 SINE B2 1 195 0 5 1064 511 333 87 60 chr15 62890863 62891413 -40603561 - L1MC4 LINE L1 -317 7725 7139 5 1064 347 289 76 30 chr15 62891788 62891920 -40603054 + MLT1A LTR MaLR 14 151 -223 5 1064 381 58 0 0 chr15 62891953 62892005 -40602969 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1064 197 245 18 35 chr15 62892028 62892142 -40602832 + (CATA)n Simple_repeat Simple_repeat 4 115 0 5 1064 395 225 14 14 chr15 62892164 62892304 -40602670 + (CATA)n Simple_repeat Simple_repeat 4 143 0 5 1064 273 197 0 0 chr15 62892303 62892369 -40602605 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 1064 213 270 0 0 chr15 62892374 62892411 -40602563 - B1F2 SINE Alu -105 44 8 5 1064 532 290 85 16 chr15 62892503 62892692 -40602282 + MLT1A LTR MaLR 173 374 0 5 1064 793 294 0 0 chr15 62892715 62892885 -40602089 + MER44D DNA MER2_type 4 173 -532 5 1064 620 265 11 105 chr15 62892919 62893185 -40601789 + MER44D DNA MER2_type 457 696 -9 5 1064 414 0 0 0 chr15 62893666 62893712 -40601262 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1064 266 298 96 0 chr15 62894457 62894551 -40600423 - MLT1C LTR MaLR -9 458 356 5 1064 8790 107 23 14 chr15 62894598 62895987 -40598987 + L1_Mm LINE L1 2660 4060 -1823 5 1064 450 290 51 19 chr15 62896035 62896193 -40598781 - MLT1C LTR MaLR -291 176 14 5 1064 1637 64 0 0 chr15 62896582 62896801 -40598173 - L1Md_F2 LINE L1 -1 6581 6363 5 1064 1085 96 0 0 chr15 62897114 62897260 -40597714 - B1_Mm SINE Alu 0 147 2 5 1064 191 351 0 31 chr15 62898296 62898393 -40596581 - MIRb SINE MIR -58 210 117 5 1064 790 329 84 12 chr15 62899405 62899737 -40595237 - ORR1E LTR MaLR 0 359 4 5 1064 378 202 24 37 chr15 62899757 62899839 -40595135 + RSINE1 SINE B4 4 84 -81 5 1064 207 0 0 0 chr15 62900418 62900441 -40594533 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1064 1270 109 11 0 chr15 62900513 62900697 -40594277 - B2_Mm1t SINE B2 -6 187 2 5 1064 267 31 0 0 chr15 62902009 62902041 -40592933 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1064 21 0 0 0 chr15 62902425 62902446 -40592528 + AT_rich Low_complexity Low_complexity 1 21 0 5 1064 302 336 49 21 chr15 62903099 62903242 -40591732 + MIR SINE MIR 77 223 -39 5 1064 29258 132 28 22 chr15 62904360 62910755 -40584219 + L1Md_A LINE L1 163 6582 0 5 1064 283 303 0 15 chr15 62913201 62913280 -40581694 - ID4 SINE ID -67 85 8 5 1064 369 297 148 0 chr15 62914396 62914524 -40580450 + RSINE1 SINE B4 3 149 -16 5 1065 1623 48 48 0 chr15 62914982 62915191 -40579783 - L1Md_F2 LINE L1 -571 6011 5793 5 1065 4472 63 10 12 chr15 62915191 62915785 -40579189 + L1Md_F2 LINE L1 5989 6581 -1 5 1065 279 0 0 0 chr15 62916127 62916158 -40578816 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1065 1031 153 0 45 chr15 62917498 62917697 -40577277 + Lx LINE L1 6458 6647 -7 5 1065 1190 145 63 0 chr15 62917778 62917985 -40576989 - Lx LINE L1 -186 6468 6249 5 1065 228 297 68 0 chr15 62918020 62918094 -40576880 - ID4_ SINE ID -4 79 1 5 1065 485 299 0 36 chr15 62918411 62918550 -40576424 - Lx8 LINE L1 -226 7247 7114 5 1065 687 360 40 0 chr15 62918757 62919082 -40575892 - Tigger13a DNA MER2_type -431 340 3 5 1065 200 185 18 53 chr15 62919390 62919447 -40575527 + A-rich Low_complexity Low_complexity 2 56 0 5 1065 514 374 39 11 chr15 62919638 62919967 -40575007 + MLT1E1 LTR MaLR 272 641 -13 5 1065 24 0 0 0 chr15 62920413 62920437 -40574537 + AT_rich Low_complexity Low_complexity 1 24 0 5 1065 35821 72 8 9 chr15 62920534 62927125 -40567849 - L1Md_F3 LINE L1 -3 6581 1 5 1065 5484 68 37 3 chr15 62927115 62927842 -40567132 - L1Md_F2 LINE L1 -22 6560 5809 5 1065 5688 68 4 0 chr15 62927838 62928578 -40566396 + L1Md_F2 LINE L1 5133 5875 -8 5 1065 5672 114 25 12 chr15 62928571 62929513 -40565461 - MusHAL1 LINE L1 -1403 1309 355 5 1065 1291 79 63 0 chr15 62929519 62929708 -40565266 - L1VL1 LINE L1 -5665 757 557 5 1065 2916 92 7 1 chr15 62929697 62930163 -40564811 + L1VL2 LINE L1 598 1065 -2550 5 1065 772 241 16 16 chr15 62930436 62930626 -40564348 - MER121 Unknown Unknown -211 201 12 5 1065 3368 187 36 7 chr15 62931265 62931938 -40563036 + RLTR17 LTR ERVK 1 692 0 5 1065 283 303 170 34 chr15 62933126 62933273 -40561701 + MIRb SINE MIR 82 248 -20 5 1065 1645 24 14 5 chr15 62933997 62934205 -40560769 + L1Md_F3 LINE L1 6374 6583 -1 5 1065 1186 54 7 0 chr15 62934273 62934420 -40560554 + B1_Mus1 SINE Alu 1 148 0 5 1065 334 53 35 0 chr15 62934420 62934477 -40560497 + (CAAAAA)n Simple_repeat Simple_repeat 6 64 0 5 1065 22 0 0 0 chr15 62934766 62934788 -40560186 + AT_rich Low_complexity Low_complexity 1 22 0 5 1065 534 70 0 0 chr15 62937903 62937974 -40557000 + (GGGA)n Simple_repeat Simple_repeat 3 73 0 5 1065 320 320 54 16 chr15 62938837 62939021 -40555953 - L1ME3A LINE L1 -207 5966 5776 5 1065 276 304 0 9 chr15 62939094 62939207 -40555767 - L1ME3A LINE L1 -515 5658 5547 5 1065 354 394 35 4 chr15 62939307 62939534 -40555440 + MIR SINE MIR 3 236 -26 5 1065 757 242 12 0 chr15 62939594 62939755 -40555219 - RSINE1 SINE B4 0 165 3 5 1065 23 0 0 0 chr15 62941001 62941024 -40553950 + AT_rich Low_complexity Low_complexity 1 23 0 5 1065 1055 250 21 42 chr15 62941405 62941693 -40553281 + B4A SINE B4 11 292 0 5 1065 245 53 0 50 chr15 62941775 62941815 -40553159 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 5 1065 2022 116 3 13 chr15 62943280 62943594 -40551380 + RLTR10E LTR ERVK 1 311 0 5 1065 23 0 0 0 chr15 62943721 62943744 -40551230 + AT_rich Low_complexity Low_complexity 1 23 0 5 1065 219 23 44 44 chr15 62944182 62944227 -40550747 + (CAA)n Simple_repeat Simple_repeat 1 45 0 5 1065 203 347 65 71 chr15 62944263 62944418 -40550556 - MIRb SINE MIR -29 239 86 5 1065 275 293 73 5 chr15 62945532 62945738 -40549236 + L1MC LINE L1 3739 3958 -2188 5 1065 446 340 10 5 chr15 62945970 62946162 -40548812 - Lx8 LINE L1 -186 7287 7095 5 1065 296 290 114 0 chr15 62946196 62946327 -40548647 + L1MC LINE L1 4014 4159 -1987 5 1065 320 43 22 0 chr15 62946327 62946373 -40548601 + (GGGA)n Simple_repeat Simple_repeat 2 48 0 5 1065 342 0 0 0 chr15 62946390 62946428 -40548546 + (TC)n Simple_repeat Simple_repeat 1 38 0 5 1065 288 0 0 0 chr15 62946428 62946459 -40548515 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1065 916 291 92 25 chr15 62946515 62947121 -40547853 + L1MC LINE L1 4287 4933 -1213 5 1065 257 302 23 0 chr15 62948035 62948121 -40546853 + L1MC LINE L1 4846 4933 -1213 5 1065 450 36 0 0 chr15 62948142 62948198 -40546776 + (TC)n Simple_repeat Simple_repeat 2 57 0 5 1065 312 120 0 0 chr15 62948198 62948247 -40546727 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 1065 723 61 0 57 chr15 62948638 62948760 -40546214 - Lx LINE L1 0 6654 6540 6 1065 1507 95 8 38 chr15 62948762 62949012 -40545962 + Lx LINE L1 6172 6387 -267 6 1065 28 0 0 0 chr15 62949390 62949418 -40545556 + AT_rich Low_complexity Low_complexity 1 28 0 6 1065 1212 254 69 47 chr15 62949428 62949792 -40545182 + ORR1D1 LTR MaLR 1 372 -2 6 1065 2251 251 32 13 chr15 62949881 62950437 -40544537 - Lx6 LINE L1 -4 7456 6890 6 1065 396 0 0 0 chr15 62950964 62951008 -40543966 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 1065 387 0 0 0 chr15 62951008 62951050 -40543924 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 1065 704 307 5 38 chr15 62951721 62951907 -40543067 + B4A SINE B4 53 232 -60 6 1065 251 222 0 0 chr15 62952115 62952178 -40542796 - Lx6 LINE L1 -224 7236 7174 6 1065 332 327 75 5 chr15 62952290 62952490 -40542484 - L1MEf LINE L1 -4478 1722 1509 6 1065 223 208 19 0 chr15 62953475 62953528 -40541446 + T-rich Low_complexity Low_complexity 2 55 0 6 1065 864 292 70 58 chr15 62954420 62954762 -40540212 - MTEb LTR MaLR -20 359 14 6 1065 284 279 0 0 chr15 62954847 62954926 -40540048 + Lx8 LINE L1 7071 7149 -324 6 1065 703 272 5 0 chr15 62955107 62955320 -40539654 + L1_Rod LINE L1 929 1142 -6466 6 1065 1263 234 63 30 chr15 62955368 62955734 -40539240 - Lx5 LINE L1 0 7050 6673 6 1065 1126 228 112 54 chr15 62955736 62956362 -40538612 + L1_Rod LINE L1 1167 1862 -3985 6 1065 2046 104 50 0 chr15 62956364 62956663 -40538311 - ORR1A2 LTR MaLR -13 314 1 6 1065 7644 164 32 13 chr15 62956769 62958466 -40536508 + L1_Rod LINE L1 1967 3639 -2208 6 1065 657 247 84 123 chr15 62958463 62959008 -40535966 + Lx9 LINE L1 2764 3287 -2560 6 1065 36806 9 0 1 chr15 62959014 62964998 -40529976 + L1Md_A LINE L1 1 5586 -297 6 1065 9056 3 0 0 chr15 62964998 62966023 -40528951 + L1Md_A LINE L1 5587 6582 0 6 1065 949 86 8 0 chr15 62966025 62966153 -40528821 + B1_Mus1 SINE Alu 20 148 0 6 1065 4640 233 55 76 chr15 62966167 62966806 -40528168 + Lx9 LINE L1 3234 3834 -2013 6 1065 1365 169 0 9 chr15 62966806 62967033 -40527941 + URR1B DNA MER1_type 1 225 0 6 1065 4640 233 55 76 chr15 62967033 62968624 -40526350 + Lx9 LINE L1 3835 5416 -431 6 1065 498 312 151 14 chr15 62968628 62969051 -40525923 + Lx9 LINE L1 7130 7610 -34 6 1065 1259 245 95 38 chr15 62969059 62969672 -40525302 + Lx9 LINE L1 5508 6164 -1309 6 1065 212 0 36 0 chr15 62969672 62969700 -40525274 + (TTTTA)n Simple_repeat Simple_repeat 5 33 0 6 1065 891 314 76 90 chr15 62969700 62969711 -40525263 + Lx9 LINE L1 6165 6171 -1302 6 1065 180 0 0 0 chr15 62969711 62969731 -40525243 + (TG)n Simple_repeat Simple_repeat 2 21 0 6 1065 891 314 76 90 chr15 62969731 62970124 -40524850 + Lx9 LINE L1 6172 6538 -935 6 1065 3250 139 135 91 chr15 62970124 62970830 -40524144 - RMER19A LTR ERVK 0 737 1 6 1065 891 314 76 90 chr15 62970830 62970859 -40524115 + Lx9 LINE L1 6539 6575 -898 6 1065 820 19 26 70 chr15 62970912 62971027 -40523947 - ORR1A1 LTR MaLR 0 346 237 6 1065 3335 110 25 6 chr15 62971027 62971557 -40523417 - Lx3C LINE L1 -392 6584 6045 6 1065 538 245 159 16 chr15 62971562 62971815 -40523159 + Lx9 LINE L1 7143 7443 -30 6 1065 239 239 122 22 chr15 62972127 62972217 -40522757 - MER53 DNA hAT -46 147 49 6 1065 581 198 35 0 chr15 62972546 62972662 -40522312 + RMER15 LTR ERVL 456 575 0 6 1065 1167 284 60 9 chr15 62972663 62973083 -40521891 - Lx8 LINE L1 -254 7219 6779 6 1065 354 157 0 0 chr15 62973093 62973176 -40521798 + (TA)n Simple_repeat Simple_repeat 1 83 0 6 1065 234 116 0 0 chr15 62973175 62973218 -40521756 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1065 870 284 23 16 chr15 62973220 62973478 -40521496 - Lx8 LINE L1 -1007 6466 6207 6 1065 185 0 40 0 chr15 62974019 62974044 -40520930 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 1065 387 270 34 24 chr15 62974100 62974305 -40520669 + L1_Mur1 LINE L1 4684 4890 -996 6 1065 230 163 0 23 chr15 62975585 62975629 -40519345 + CT-rich Low_complexity Low_complexity 4 46 0 6 1065 712 211 20 7 chr15 62975641 62975789 -40519185 - B1_Mur4 SINE Alu 0 150 1 6 1065 2681 231 9 7 chr15 62976314 62976895 -40518079 - Lx5 LINE L1 -9 7041 6460 6 1065 3938 48 0 8 chr15 62976927 62977414 -40517560 - L1Md_F2 LINE L1 -3 6579 6097 6 1065 1169 153 37 5 chr15 62977415 62977631 -40517343 - Lx5 LINE L1 -583 6467 6245 6 1065 183 273 122 75 chr15 62978329 62978436 -40516538 + L2c LINE L2 3275 3386 -1 6 1065 216 0 0 0 chr15 62978530 62978554 -40516420 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6 1065 22 56 0 0 chr15 62978847 62978883 -40516091 + AT_rich Low_complexity Low_complexity 1 36 0 6 1065 299 340 0 11 chr15 62978921 62979016 -40515958 - MIRc SINE MIR -123 145 52 6 1065 226 365 10 0 chr15 62979057 62979153 -40515821 + Tigger7 DNA MER2_type 22 118 -2373 6 1065 395 191 63 9 chr15 62979160 62979271 -40515703 + Tigger7 DNA MER2_type 2312 2428 -63 6 1065 234 251 112 0 chr15 62980277 62980344 -40514630 + ID4_ SINE ID 3 79 -4 6 1065 408 20 0 0 chr15 62980344 62980393 -40514581 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1065 477 0 0 0 chr15 62980393 62980445 -40514529 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 1065 203 32 65 0 chr15 62980704 62980735 -40514239 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 6 1065 327 25 0 0 chr15 62980881 62980921 -40514053 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1065 470 314 39 78 chr15 62981792 62981955 -40513019 - L1M3 LINE L1 -553 5738 5572 6 1065 369 62 0 0 chr15 62981955 62982003 -40512971 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 6 1065 590 218 15 15 chr15 62982012 62982147 -40512827 - B1_Mur1 SINE Alu -13 136 2 6 1065 470 275 271 28 chr15 62982147 62982632 -40512342 - L1M3 LINE L1 -720 5571 4942 6 1065 810 181 0 34 chr15 62982706 62982855 -40512119 + B1_Mus1 SINE Alu 5 148 0 6 1065 802 242 107 22 chr15 62982874 62983284 -40511690 + L1MA8 LINE L1 5844 6288 -3 6 1065 231 152 0 0 chr15 62983595 62983641 -40511333 + (TTAA)n Simple_repeat Simple_repeat 4 49 0 6 1065 309 319 44 9 chr15 62984013 62984127 -40510847 + MIRc SINE MIR 9 126 -142 6 1065 1161 65 6 18 chr15 62984977 62985148 -40509826 - L1Md_F2 LINE L1 0 6582 6414 6 1065 22 35 0 0 chr15 62985225 62985254 -40509720 + AT_rich Low_complexity Low_complexity 1 29 0 6 1065 432 55 0 0 chr15 62986122 62986177 -40508797 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1065 222 37 0 0 chr15 62986180 62986207 -40508767 + (TAG)n Simple_repeat Simple_repeat 1 27 0 6 1065 405 39 0 0 chr15 62986276 62986327 -40508647 + (TAG)n Simple_repeat Simple_repeat 1 51 0 6 1065 702 266 84 55 chr15 62988334 62988608 -40506366 - RMER21B LTR ERV1 -289 553 272 6 1065 287 246 0 55 chr15 62988907 62988980 -40505994 + L2a LINE L2 3358 3426 0 6 1065 1178 267 143 3 chr15 62989490 62989847 -40505127 - MTD LTR MaLR -12 407 1 6 1065 220 291 63 71 chr15 62990373 62990499 -40504475 + MIR SINE MIR 125 249 -13 6 1065 3401 74 0 0 chr15 62990925 62991356 -40503618 - L1_Mus1 LINE L1 0 6567 6137 6 1065 2890 53 0 0 chr15 62991356 62991734 -40503240 + L1_Mus1 LINE L1 5740 6117 -450 6 1065 260 312 63 18 chr15 62991734 62991845 -40503129 + MLT1E2 LTR MaLR 141 256 -371 6 1065 356 355 8 8 chr15 62991926 62992072 -40502902 - MLT1A1 LTR MaLR -2 465 282 6 1065 411 402 58 12 chr15 62992175 62992432 -40502542 - MLT1A1 LTR MaLR -132 276 8 6 1065 597 325 37 95 chr15 62992434 62992730 -40502244 + MLT1E2 LTR MaLR 349 627 0 6 1065 213 155 52 0 chr15 62992846 62992904 -40502070 + GA-rich Low_complexity Low_complexity 3 63 0 6 1065 6869 88 11 16 chr15 62993211 62994223 -40500751 + Lx LINE L1 5645 6651 -3 6 1065 197 224 17 0 chr15 62994223 62994281 -40500693 + GA-rich Low_complexity Low_complexity 2 60 0 6 1065 269 357 87 23 chr15 62994533 62994751 -40500223 + MIRb SINE MIR 28 259 -9 6 1065 360 257 58 19 chr15 62994765 62994868 -40500106 - L2a LINE L2 0 3426 3320 6 1065 189 74 0 0 chr15 62994932 62994959 -40500015 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 1065 215 331 97 41 chr15 62996198 62996343 -40498631 + MIRb SINE MIR 107 259 -9 6 1065 477 0 0 0 chr15 62997119 62997172 -40497802 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1065 212 227 21 83 chr15 62997711 62997855 -40497119 + T-rich Low_complexity Low_complexity 2 136 0 6 1065 38 68 0 0 chr15 62997889 62997962 -40497012 + AT_rich Low_complexity Low_complexity 1 73 0 6 1065 399 307 65 14 chr15 62998123 62998262 -40496712 - RMER15 LTR ERVL -155 420 275 6 1065 680 371 88 55 chr15 62998459 62999164 -40495810 + MLT1H-int LTR MaLR 5 732 -677 6 1065 267 329 105 25 chr15 62999377 62999590 -40495384 + MLT1H-int LTR MaLR 1068 1357 -132 6 1065 2060 46 4 0 chr15 62999737 63000000 -40494974 + L1Md_F2 LINE L1 5863 6126 -456 6 1065 3415 65 18 2 chr15 63000000 63000449 -40494525 + L1Md_F2 LINE L1 6127 6582 0 1 1065 798 268 159 16 chr15 63000672 63000991 -40493983 - MTD LTR MaLR -5 414 50 2 1065 373 289 245 12 chr15 63001057 63001306 -40493668 + L1ME1 LINE L1 5833 6139 -40 3 1065 198 0 0 0 chr15 63002623 63002645 -40492329 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 4 1065 542 289 93 12 chr15 63002898 63003059 -40491915 + B4 SINE B4 108 281 -11 5 1065 364 140 18 27 chr15 63003087 63003197 -40491777 + (CA)n Simple_repeat Simple_repeat 1 109 0 6 1065 270 353 67 19 chr15 63005156 63005260 -40489714 + MIR SINE MIR 36 144 -118 7 1065 482 297 0 15 chr15 63005700 63005830 -40489144 + RSINE1 SINE B4 9 136 -29 8 1065 7316 108 8 10 chr15 63006657 63007716 -40487258 + Lx LINE L1 5589 6645 -9 9 1065 3230 105 17 8 chr15 63007752 63008223 -40486751 + MT2C_Mm LTR ERVL 1 475 0 1 1065 11085 73 13 3 chr15 63009337 63011355 -40483619 - L1VL4 LINE L1 -1117 2442 404 1 1065 198 167 0 0 chr15 63011427 63011463 -40483511 + T-rich Low_complexity Low_complexity 1 36 0 1 1065 707 337 88 4 chr15 63012126 63012388 -40482586 - Lx9 LINE L1 -1048 6596 6313 1 1065 1486 272 46 10 chr15 63012700 63013286 -40481688 - L1M2 LINE L1 -1092 5051 4445 1 1065 9034 56 1 0 chr15 63013283 63014417 -40480557 + L1Md_F2 LINE L1 4452 5586 -297 1 1065 7836 43 17 2 chr15 63014417 63015396 -40479578 + L1Md_F2 LINE L1 5587 6580 -2 1 1065 3584 267 68 65 chr15 63015432 63017478 -40477496 - L1_Rod LINE L1 -1423 4424 2374 1 1065 937 296 80 29 chr15 63017489 63018104 -40476870 - L1_Rod LINE L1 -443 5404 4759 1 1065 1143 335 53 7 chr15 63018115 63018548 -40476426 + Lx8 LINE L1 6555 7007 -466 1 1065 205 175 15 31 chr15 63019968 63019999 -40474975 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1 1065 303 28 0 0 chr15 63019999 63020035 -40474939 + (GTTTG)n Simple_repeat Simple_repeat 2 37 0 2 1065 205 175 15 31 chr15 63020035 63020068 -40474906 + (TTG)n Simple_repeat Simple_repeat 3 35 0 2 1065 454 338 197 22 chr15 63020284 63020553 -40474421 - MLT1F2 LTR MaLR -240 320 5 2 1065 285 263 97 39 chr15 63020981 63021084 -40473890 - ID_B1 SINE B4 -20 204 96 2 1065 274 287 128 81 chr15 63021113 63021261 -40473713 + MLT1K LTR MaLR 324 478 -117 2 1065 797 239 205 61 chr15 63022538 63022850 -40472124 - ORR1E LTR MaLR -2 357 1 2 1065 495 33 0 0 chr15 63022860 63022921 -40472053 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 1065 633 237 14 5 chr15 63023117 63023259 -40471715 + B3 SINE B2 1 144 -49 2 1065 2595 219 14 13 chr15 63023259 63023814 -40471160 - Lx9 LINE L1 -419 7225 6670 2 1065 289 136 0 0 chr15 63023819 63023863 -40471111 + Lx9 LINE L1 7205 7248 -396 2 1065 625 191 0 9 chr15 63023875 63023986 -40470988 - Lx9 LINE L1 -974 6670 6561 2 1065 2718 177 37 8 chr15 63024064 63024576 -40470398 + RLTR11A2 LTR ERVK 1 527 0 3 1065 471 221 0 0 chr15 63024982 63025225 -40469749 + (CA)n Simple_repeat Simple_repeat 1 243 0 3 1065 720 168 0 0 chr15 63025238 63025411 -40469563 + (CA)n Simple_repeat Simple_repeat 2 174 0 3 1065 210 128 0 0 chr15 63025420 63025459 -40469515 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 3 1065 242 206 0 16 chr15 63026364 63026428 -40468546 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 3 1065 347 335 30 18 chr15 63026442 63026606 -40468368 + MIR SINE MIR 63 228 -34 3 1065 228 111 0 0 chr15 63027044 63027080 -40467894 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 3 1065 234 323 32 0 chr15 63027084 63027146 -40467828 - ID4_ SINE ID -11 72 9 3 1065 372 207 161 24 chr15 63027158 63027282 -40467692 - B1F SINE Alu -8 141 1 3 1065 239 345 16 48 chr15 63027349 63027474 -40467500 + L2c LINE L2 3266 3386 -1 3 1065 216 0 0 0 chr15 63027648 63027672 -40467302 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 1065 1207 241 68 41 chr15 63027710 63028169 -40466805 + L1Md_F LINE L1 115 585 -5934 4 1065 18753 157 67 32 chr15 63028156 63032532 -40462442 + L1_Mus3 LINE L1 2087 6630 -8 4 1065 197 65 0 31 chr15 63033009 63033041 -40461933 + (GTGTG)n Simple_repeat Simple_repeat 1 31 0 4 1065 26 0 0 0 chr15 63033315 63033341 -40461633 + AT_rich Low_complexity Low_complexity 1 26 0 4 1065 804 265 60 0 chr15 63033440 63033640 -40461334 - MTD LTR MaLR -14 407 196 4 1065 435 112 0 0 chr15 63033641 63033721 -40461253 + (CTTG)n Simple_repeat Simple_repeat 1 80 0 4 1065 1061 76 23 17 chr15 63033721 63033895 -40461079 + (TTTCC)n Simple_repeat Simple_repeat 2 176 0 4 1065 303 244 45 23 chr15 63033911 63033999 -40460975 - L1MEg LINE L1 -4145 1939 1850 4 1065 1868 101 33 0 chr15 63034005 63034281 -40460693 - Lx LINE L1 -3 6651 6367 4 1065 1019 226 0 24 chr15 63034281 63034494 -40460480 - MTD LTR MaLR -210 209 2 4 1065 429 36 0 0 chr15 63034521 63034576 -40460398 + (TC)n Simple_repeat Simple_repeat 1 55 0 4 1065 230 273 14 70 chr15 63034694 63034765 -40460209 + ID4 SINE ID 3 69 -14 5 1065 578 14 14 0 chr15 63034834 63034905 -40460069 + (GA)n Simple_repeat Simple_repeat 2 73 0 5 1065 37 23 0 0 chr15 63035961 63036005 -40458969 + AT_rich Low_complexity Low_complexity 1 44 0 5 1065 366 123 0 0 chr15 63036033 63036090 -40458884 + (TA)n Simple_repeat Simple_repeat 1 57 0 5 1065 639 323 139 39 chr15 63036105 63036363 -40458611 + B4 SINE B4 9 292 0 5 1065 1650 31 0 0 chr15 63037098 63037291 -40457683 + B2_Mm1t SINE B2 1 193 0 5 1065 198 0 0 0 chr15 63037461 63037483 -40457491 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1065 397 344 31 110 chr15 63037709 63038000 -40456974 + MLT1B LTR MaLR 42 309 -81 5 1065 381 326 30 83 chr15 63039310 63039571 -40455403 + B4A SINE B4 6 267 -25 5 1065 381 22 0 0 chr15 63039571 63039617 -40455357 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1065 26 30 0 0 chr15 63039652 63039685 -40455289 + AT_rich Low_complexity Low_complexity 1 33 0 6 1065 250 306 116 9 chr15 63040603 63040715 -40454259 + MLT2B3 LTR ERVL 429 552 -2 6 1065 538 333 38 48 chr15 63041723 63041909 -40453065 + B3A SINE B2 1 184 -14 6 1065 10675 199 39 121 chr15 63042185 63042740 -40452234 + L1_Mur3 LINE L1 1465 2058 -3822 6 1065 390 74 0 0 chr15 63042740 63042794 -40452180 + (CA)n Simple_repeat Simple_repeat 1 54 0 6 133 10675 199 39 121 chr15 63042794 63045710 -40449264 + L1_Mur3 LINE L1 2059 4649 -1231 6 1066 1748 120 44 10 chr15 63045710 63046005 -40448969 + Lx5 LINE L1 5734 6038 -1012 6 1066 3921 213 27 55 chr15 63046001 63046405 -40448569 + Lx5 LINE L1 6220 6630 -420 6 1066 297 0 0 0 chr15 63046405 63046438 -40448536 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1066 3921 213 27 55 chr15 63046438 63046678 -40448296 + Lx5 LINE L1 6631 6874 -176 6 1066 675 195 6 18 chr15 63046678 63046845 -40448129 + L1Md_F3 LINE L1 6406 6570 -14 6 1066 3921 213 27 55 chr15 63046845 63047049 -40447925 + Lx5 LINE L1 6875 7044 -6 6 1066 21 0 0 0 chr15 63047591 63047612 -40447362 + AT_rich Low_complexity Low_complexity 1 21 0 6 1066 216 284 10 111 chr15 63049541 63049640 -40445334 - B1F SINE Alu -46 103 15 6 1066 24 32 0 0 chr15 63050920 63050951 -40444023 + AT_rich Low_complexity Low_complexity 1 31 0 7 1066 315 213 0 0 chr15 63051983 63052058 -40442916 + GA-rich Low_complexity Low_complexity 3 77 0 7 1066 1892 255 61 11 chr15 63052134 63052267 -40442707 - Lx9 LINE L1 -17 7627 7477 7 1066 477 34 0 0 chr15 63052267 63052326 -40442648 + (TG)n Simple_repeat Simple_repeat 2 60 0 7 1066 1892 255 61 11 chr15 63052326 63052763 -40442211 - Lx9 LINE L1 -168 7476 7028 7 1066 1592 216 87 3 chr15 63052761 63053118 -40441856 + Lx9 LINE L1 6660 7046 -598 7 1066 1401 72 0 20 chr15 63053203 63053402 -40441572 - L1_Mus2 LINE L1 -8 6558 6364 7 1066 4098 160 12 9 chr15 63053405 63054092 -40440882 + L1_Mm LINE L1 5150 5838 -45 7 1066 1262 83 0 42 chr15 63054092 63054281 -40440693 + L1_Mus1 LINE L1 6385 6565 -2 7 1066 5145 110 50 16 chr15 63054294 63055086 -40439888 + Lx LINE L1 5827 6645 -9 7 1066 199 333 34 61 chr15 63057602 63057749 -40437225 + MIRc SINE MIR 116 258 -10 7 1066 603 60 0 0 chr15 63058057 63058141 -40436833 + (GA)n Simple_repeat Simple_repeat 2 85 0 7 1066 538 276 152 23 chr15 63058308 63058480 -40436494 + B3 SINE B2 3 197 -1 8 1066 651 26 0 0 chr15 63058530 63058607 -40436367 + (GA)n Simple_repeat Simple_repeat 1 77 0 8 1066 551 40 14 0 chr15 63058924 63058998 -40435976 + (TG)n Simple_repeat Simple_repeat 2 76 0 8 1066 386 286 0 0 chr15 63059008 63059085 -40435889 - RSINE1 SINE B4 -23 142 66 8 1066 21 36 0 0 chr15 63060500 63060528 -40434446 + AT_rich Low_complexity Low_complexity 1 28 0 8 1066 891 75 0 0 chr15 63062266 63062386 -40432588 + (TA)n Simple_repeat Simple_repeat 2 121 0 8 1066 207 290 0 0 chr15 63062510 63062572 -40432402 + (TA)n Simple_repeat Simple_repeat 2 63 0 8 1066 408 182 0 0 chr15 63062617 63062683 -40432291 - Lx8 LINE L1 -791 6682 6617 8 1066 479 248 15 15 chr15 63062729 63062864 -40432110 - Lx7 LINE L1 0 7696 7562 8 1066 23 0 0 0 chr15 63063608 63063631 -40431343 + AT_rich Low_complexity Low_complexity 1 23 0 8 1066 232 348 15 0 chr15 63065068 63065203 -40429771 - L1MC4 LINE L1 -1018 7024 6888 9 1066 222 171 0 0 chr15 63065622 63065663 -40429311 + T-rich Low_complexity Low_complexity 3 43 0 9 1066 372 302 97 52 chr15 63065844 63066134 -40428840 - L1ME3B LINE L1 -166 6074 5772 9 1066 255 267 8 40 chr15 63066425 63066550 -40428424 + (TAA)n Simple_repeat Simple_repeat 1 121 0 9 1066 180 111 0 0 chr15 63066602 63066629 -40428345 + (TAA)n Simple_repeat Simple_repeat 2 28 0 9 1066 515 271 128 12 chr15 63066748 63067006 -40427968 + L1MA4 LINE L1 5638 5925 -375 9 1066 211 258 0 31 chr15 63067008 63067072 -40427902 + (CATATA)n Simple_repeat Simple_repeat 2 63 0 9 1066 255 356 0 0 chr15 63068416 63068489 -40426485 - MER58C DNA MER1_type -132 83 11 9 1066 429 36 0 0 chr15 63068701 63068756 -40426218 + (TG)n Simple_repeat Simple_repeat 1 55 0 9 1066 656 316 16 36 chr15 63069051 63069236 -40425738 + B3A SINE B2 2 183 -15 9 1066 240 111 0 0 chr15 63069236 63069272 -40425702 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 1066 182 290 57 14 chr15 63069449 63069519 -40425455 + MIR SINE MIR 111 183 -79 1 1066 453 309 86 29 chr15 63069898 63070038 -40424936 + RSINE1 SINE B4 1 148 -17 1 1066 414 57 0 0 chr15 63070056 63070109 -40424865 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1066 213 121 0 0 chr15 63070115 63070148 -40424826 + (CACCAT)n Simple_repeat Simple_repeat 4 36 0 1 1066 846 311 87 9 chr15 63070594 63070938 -40424036 - Lx8 LINE L1 -3 7470 7100 1 1066 282 257 49 42 chr15 63070951 63070976 -40423998 + L1_Mur3 LINE L1 1810 1832 -4048 1 1066 282 29 0 0 chr15 63070976 63071011 -40423963 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1066 282 259 51 39 chr15 63071011 63071162 -40423812 + L1_Mur3 LINE L1 1833 1983 -3903 1 1066 3119 66 5 0 chr15 63071286 63071680 -40423294 + MTA_Mm LTR MaLR 1 396 0 1 1066 207 0 0 0 chr15 63071871 63071894 -40423080 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1066 1127 65 0 0 chr15 63071894 63072032 -40422942 + B1_Mm SINE Alu 1 138 -9 1 1066 24 0 0 0 chr15 63072036 63072060 -40422914 + GC_rich Low_complexity Low_complexity 1 24 0 1 1066 3891 140 45 17 chr15 63072076 63072737 -40422237 + Lx3B LINE L1 6290 6969 -4 1 1066 393 22 0 0 chr15 63072769 63072815 -40422159 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1066 1591 189 87 12 chr15 63072815 63073147 -40421827 - RMER1B Other Other -36 1030 674 1 1066 306 0 0 0 chr15 63073472 63073506 -40421468 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1066 473 312 17 91 chr15 63073518 63073694 -40421280 - RSINE1 SINE B4 0 165 3 1 1066 315 254 124 23 chr15 63073742 63073871 -40421103 - L1MD LINE L1 -872 5274 5133 1 1066 21 0 0 0 chr15 63074180 63074201 -40420773 + AT_rich Low_complexity Low_complexity 1 21 0 1 1066 1497 94 13 4 chr15 63075007 63075232 -40419742 - L1_Mus3 LINE L1 -19 6619 6393 1 1066 8228 24 19 0 chr15 63075245 63076651 -40418323 - L1Md_T LINE L1 0 6582 5161 1 1066 3936 18 0 0 chr15 63076649 63077102 -40417872 + L1Md_T LINE L1 4715 5167 -716 1 1066 343 64 0 0 chr15 63077099 63077146 -40417828 - L1_Mus3 LINE L1 -250 6388 6342 1 1066 1012 245 0 10 chr15 63077309 63077503 -40417471 - B3 SINE B2 0 216 25 1 1066 221 198 96 19 chr15 63078129 63078207 -40416767 - B1_Mur1 SINE Alu -9 140 28 1 1066 687 108 0 0 chr15 63078456 63078558 -40416416 + (TCCC)n Simple_repeat Simple_repeat 4 105 0 1 1066 198 167 0 0 chr15 63078553 63078589 -40416385 + T-rich Low_complexity Low_complexity 3 38 0 1 1066 1206 160 21 16 chr15 63081318 63081560 -40413414 - Lx3_Mus LINE L1 -1 7008 6766 1 1066 405 126 179 0 chr15 63081565 63081632 -40413342 - Lx3_Mus LINE L1 -890 6119 6051 1 1066 195 42 0 0 chr15 63081632 63081656 -40413318 + (TCCC)n Simple_repeat Simple_repeat 1 24 0 1 1066 405 126 179 0 chr15 63081656 63081683 -40413291 - Lx3_Mus LINE L1 -959 6050 6009 1 1066 3638 75 28 16 chr15 63081682 63082253 -40412721 + Lx3_Mus LINE L1 5376 5944 -1065 1 1066 468 318 75 9 chr15 63082254 63082373 -40412601 - B4A SINE B4 -64 228 108 1 1066 1005 158 153 0 chr15 63082373 63082569 -40412405 - URR1A DNA MER1_type 0 226 1 1 1066 468 318 75 9 chr15 63082569 63082662 -40412312 - B4A SINE B4 -185 107 3 1 1066 269 357 99 7 chr15 63083490 63083631 -40411343 - MER3 DNA MER1_type -54 155 2 1 1066 801 0 0 0 chr15 63085056 63085145 -40409829 + (GA)n Simple_repeat Simple_repeat 2 90 0 1 1066 282 399 67 35 chr15 63086494 63086777 -40408197 + LTR33A LTR ERVL 9 300 -220 1 1066 300 176 0 0 chr15 63087683 63087751 -40407223 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 1066 280 326 116 74 chr15 63087925 63088320 -40406654 - MLT1F LTR MaLR -189 359 6 1 1066 302 231 30 15 chr15 63088358 63088424 -40406550 - ID4_ SINE ID -16 67 1 1 1066 306 138 0 0 chr15 63089005 63089063 -40405911 + (TC)n Simple_repeat Simple_repeat 2 59 0 1 1066 1120 286 74 38 chr15 63090215 63090687 -40404287 + Lx9 LINE L1 6933 7421 -223 1 1066 796 46 18 0 chr15 63090712 63090821 -40404153 + (TG)n Simple_repeat Simple_repeat 2 112 0 1 1066 230 318 176 0 chr15 63090992 63091077 -40403897 + ID_B1 SINE B4 87 186 -38 1 1066 213 324 9 105 chr15 63091077 63091106 -40403868 + PB1D9 SINE Alu 6 108 -12 1 1066 303 143 0 49 chr15 63091343 63091424 -40403550 + GA-rich Low_complexity Low_complexity 1 77 0 1 1066 1589 274 49 19 chr15 63092196 63092491 -40402483 + Lx6 LINE L1 6970 7266 -194 1 1066 504 138 0 49 chr15 63092491 63092613 -40402361 - L1Md_F2 LINE L1 -3 6579 6464 1 1066 1589 274 49 19 chr15 63092613 63092644 -40402330 + Lx6 LINE L1 7267 7315 -145 1 1066 279 0 0 0 chr15 63092644 63092675 -40402299 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1066 1589 274 49 19 chr15 63092675 63092816 -40402158 + Lx6 LINE L1 7316 7450 -10 1 1066 495 339 161 24 chr15 63094524 63094813 -40400161 - MER63C DNA AcHobo -59 871 549 1 1066 396 0 0 0 chr15 63094813 63094857 -40400117 + (TTA)n Simple_repeat Simple_repeat 2 45 0 1 1066 4536 107 32 109 chr15 63094862 63095684 -40399290 - Lx3B LINE L1 -4 6969 6212 1 1066 495 344 55 39 chr15 63095684 63095899 -40399075 - MER63C DNA AcHobo -386 544 318 1 1066 206 262 179 0 chr15 63096199 63096283 -40398691 - L3 LINE CR1 -297 4192 4094 1 1066 2403 63 13 0 chr15 63096970 63097285 -40397689 + L1_Mus1 LINE L1 6249 6567 0 1 1066 454 305 0 11 chr15 63097328 63097507 -40397467 + GA-rich Low_complexity Low_complexity 2 178 0 1 1066 227 103 26 0 chr15 63097509 63097548 -40397426 + (AGGGGG)n Simple_repeat Simple_repeat 2 41 0 1 1066 3375 232 44 70 chr15 63097701 63098946 -40396028 + Lx9 LINE L1 4750 5964 -1680 1 1066 209 169 0 17 chr15 63099160 63099220 -40395754 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 1066 2651 68 0 0 chr15 63099220 63099558 -40395416 - L1_Mm LINE L1 -745 5138 4801 1 1066 207 301 197 90 chr15 63099993 63100216 -40394758 - MIR SINE MIR -14 248 2 1 1066 183 200 0 0 chr15 63100962 63100997 -40393977 - MIR SINE MIR -69 139 105 1 1066 246 152 49 37 chr15 63101093 63101175 -40393799 + (TATATG)n Simple_repeat Simple_repeat 4 86 0 1 1066 261 57 0 0 chr15 63101248 63101283 -40393691 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 1 1066 340 258 53 91 chr15 63101447 63101598 -40393376 + RMER17C LTR ERVK 80 234 -176 1 1066 909 274 35 25 chr15 63101598 63101882 -40393092 - B4 SINE B4 -4 288 2 1 1066 340 258 53 91 chr15 63101882 63101994 -40392980 + RMER17C LTR ERVK 235 332 -78 1 1066 2499 73 3 0 chr15 63103076 63103405 -40391569 - L1_Mus2 LINE L1 -4 6562 6233 1 1066 333 0 0 0 chr15 63103470 63103507 -40391467 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1066 7140 61 0 12 chr15 63103517 63104429 -40390545 - L1Md_F2 LINE L1 0 6582 5682 1 1066 270 229 96 24 chr15 63104429 63104554 -40390420 + Lx7 LINE L1 7561 7694 -2 1 1066 236 233 11 75 chr15 63104584 63104677 -40390297 + L1M5 LINE L1 5199 5285 -861 1 1066 1334 306 68 49 chr15 63104728 63105518 -40389456 + L1MB7 LINE L1 5318 6122 -62 1 1066 322 348 0 0 chr15 63105924 63106042 -40388932 + (TATATG)n Simple_repeat Simple_repeat 4 121 0 1 1066 885 203 35 44 chr15 63107117 63107344 -40387630 - URR1A DNA MER1_type 0 226 2 1 1066 27 0 0 0 chr15 63108102 63108129 -40386845 + AT_rich Low_complexity Low_complexity 1 27 0 1 1066 405 0 0 0 chr15 63108541 63108586 -40386388 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1066 1132 82 0 0 chr15 63108666 63108813 -40386161 - B1_Mus2 SINE Alu 0 147 1 1 1066 197 306 67 67 chr15 63108876 63108995 -40385979 - L2c LINE L2 -1 3386 3268 1 1066 201 343 165 24 chr15 63109420 63109590 -40385384 - MIRb SINE MIR -8 260 67 1 1066 1042 211 104 16 chr15 63112551 63112802 -40382172 + Lx6 LINE L1 7162 7434 -26 1 1066 1134 304 93 63 chr15 63112900 63114075 -40380899 + L1M2 LINE L1 1898 3147 -3698 1 1066 414 39 0 0 chr15 63114075 63114127 -40380847 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1066 1134 278 47 108 chr15 63114127 63114572 -40380402 + L1M2 LINE L1 3148 3529 -3316 1 1066 1335 292 116 7 chr15 63114570 63115035 -40379939 + Lx8 LINE L1 6703 7218 -255 1 1066 627 121 0 0 chr15 63115512 63115611 -40379363 + (TA)n Simple_repeat Simple_repeat 1 99 0 1 1066 738 292 81 34 chr15 63115696 63116280 -40378694 + L1M2 LINE L1 3645 4255 -2590 1 1066 366 183 0 0 chr15 63116784 63116855 -40378119 + GA-rich Low_complexity Low_complexity 2 72 0 1 1066 322 352 62 7 chr15 63116855 63117001 -40377973 + HAL1-3A_ME LINE L1 2285 2438 -420 1 1066 210 118 0 0 chr15 63117002 63117036 -40377938 + (GGAGA)n Simple_repeat Simple_repeat 1 34 0 1 1066 2503 290 57 49 chr15 63117302 63118455 -40376519 + L1M2 LINE L1 4271 5432 -1413 1 1066 186 43 0 0 chr15 63118455 63118478 -40376496 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 1066 2503 290 57 49 chr15 63118478 63118944 -40376030 + L1M2 LINE L1 5433 5902 -943 1 1066 856 303 48 20 chr15 63118996 63119245 -40375729 - MTE2b LTR MaLR -123 256 1 1 1066 338 296 68 17 chr15 63119957 63120074 -40374900 + MIRb SINE MIR 112 234 -34 1 1066 26 50 0 0 chr15 63120763 63120803 -40374171 + AT_rich Low_complexity Low_complexity 1 40 0 1 1066 547 14 28 0 chr15 63121075 63121147 -40373827 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 1 1066 318 281 163 16 chr15 63121951 63122074 -40372900 + RSINE1 SINE B4 4 144 -21 1 1066 1105 44 0 53 chr15 63122107 63122297 -40372677 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 1066 473 32 16 0 chr15 63122297 63122359 -40372615 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 1066 334 310 98 30 chr15 63124154 63124357 -40370617 - L1ME1 LINE L1 -87 6092 5876 1 1066 543 101 0 0 chr15 63124408 63124487 -40370487 + (TTCC)n Simple_repeat Simple_repeat 3 81 0 1 1066 416 272 88 28 chr15 63124489 63124718 -40370256 - L1MD LINE L1 -538 5821 5586 1 1066 232 279 16 0 chr15 63125125 63125186 -40369788 - ID4 SINE ID -20 63 2 1 1066 200 118 0 29 chr15 63125222 63125257 -40369717 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 1 1066 201 221 0 0 chr15 63125518 63125586 -40369388 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 1066 371 302 9 0 chr15 63125609 63125725 -40369249 + (TG)n Simple_repeat Simple_repeat 2 118 0 1 1066 637 327 119 23 chr15 63125743 63126003 -40368971 - B4A SINE B4 -2 290 6 1 1066 315 0 0 0 chr15 63126628 63126663 -40368311 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1 1066 2847 60 0 0 chr15 63127083 63127436 -40367538 + L1Md_F2 LINE L1 6211 6563 -19 1 1066 228 233 0 0 chr15 63127634 63127677 -40367297 + L2a LINE L2 3378 3420 -6 1 1066 260 309 0 29 chr15 63128208 63128278 -40366696 + ID2 SINE ID 5 72 -11 1 1066 604 219 12 0 chr15 63128278 63128442 -40366532 + (TA)n Simple_repeat Simple_repeat 1 166 0 1 1066 261 163 0 0 chr15 63128441 63128490 -40366484 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1066 927 297 10 53 chr15 63129463 63129765 -40365209 - B4 SINE B4 -2 290 2 2 1066 747 192 21 26 chr15 63129988 63130164 -40364810 + B3 SINE B2 9 181 -14 2 1066 319 314 204 9 chr15 63130167 63130398 -40364576 + Lx8 LINE L1 7002 7277 -196 2 1066 34 0 0 0 chr15 63130541 63130575 -40364399 + AT_rich Low_complexity Low_complexity 1 34 0 2 1066 1876 40 35 12 chr15 63132276 63132531 -40362443 - Lx3_Mus LINE L1 0 7009 6749 2 1066 23 33 0 0 chr15 63133022 63133052 -40361922 + AT_rich Low_complexity Low_complexity 1 30 0 2 1066 23 0 0 0 chr15 63135036 63135059 -40359915 + AT_rich Low_complexity Low_complexity 1 23 0 2 1066 335 364 84 22 chr15 63135507 63135830 -40359144 + L1M4 LINE L1 5262 5604 -570 2 1066 24 0 0 0 chr15 63135837 63135861 -40359113 + AT_rich Low_complexity Low_complexity 1 24 0 2 1066 235 305 131 39 chr15 63135902 63136161 -40358813 + L1M4 LINE L1 5607 5889 -289 2 1066 513 32 0 0 chr15 63136162 63136225 -40358749 + (TA)n Simple_repeat Simple_repeat 2 64 0 2 1066 279 0 0 0 chr15 63136577 63136608 -40358366 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1066 216 280 104 57 chr15 63136714 63136820 -40358154 - MER91C DNA Tip100 -27 113 3 2 1066 674 167 7 110 chr15 63136935 63137090 -40357884 + B2_Mm2 SINE B2 1 139 -56 2 1066 369 0 0 0 chr15 63137106 63137147 -40357827 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 2 1066 311 287 78 0 chr15 63137677 63137792 -40357182 + MIR SINE MIR 114 237 -25 2 1066 2705 98 8 3 chr15 63138505 63138894 -40356080 - L1_Mus3 LINE L1 -6 6632 6242 2 1066 2194 56 52 0 chr15 63138894 63139181 -40355793 + L1_Mus3 LINE L1 5926 6227 -411 2 1066 857 252 46 23 chr15 63139844 63140063 -40354911 + ORR1D2 LTR MaLR 1 224 -146 2 1066 515 144 0 76 chr15 63140063 63140168 -40354806 + Lx5 LINE L1 5428 5524 -353 2 1066 2610 188 108 40 chr15 63140169 63140718 -40354256 - RMER20B LTR ERVK -22 605 20 2 1066 2954 157 19 13 chr15 63140732 63141302 -40353672 + Lx5 LINE L1 5525 6109 -941 2 1066 613 24 0 0 chr15 63141270 63141354 -40353620 + L1Md_F3 LINE L1 6487 6570 -14 2 1066 499 271 18 48 chr15 63141359 63141403 -40353571 + Lx5 LINE L1 6082 6126 -924 2 1066 2862 62 88 0 chr15 63141403 63141790 -40353184 - BGLII LTR ERVK 0 421 1 2 1066 499 271 18 48 chr15 63141790 63141912 -40353062 + Lx5 LINE L1 6127 6242 -808 2 1066 745 300 15 0 chr15 63143364 63143564 -40351410 + B3 SINE B2 4 206 -10 2 1066 582 15 0 0 chr15 63143805 63143872 -40351102 + (TC)n Simple_repeat Simple_repeat 2 68 0 2 1066 702 290 88 21 chr15 63143873 63144158 -40350816 + Lx8 LINE L1 6185 6488 -985 2 1066 759 199 87 5 chr15 63144218 63144425 -40350549 + Lx9 LINE L1 7421 7644 0 2 1066 430 313 166 39 chr15 63144789 63145427 -40349547 + L1MC3 LINE L1 5801 6519 -1266 2 1066 588 111 0 0 chr15 63145847 63145946 -40349028 + (TA)n Simple_repeat Simple_repeat 2 100 0 2 1066 6182 98 30 7 chr15 63146254 63147155 -40347819 - Lx3_Mus LINE L1 -37 6972 6051 2 1066 518 29 43 0 chr15 63147206 63147276 -40347698 + (TTTTA)n Simple_repeat Simple_repeat 2 74 0 2 1066 496 289 72 96 chr15 63147953 63148202 -40346772 + B4 SINE B4 2 244 -48 2 1066 373 252 181 31 chr15 63148190 63148350 -40346624 + B4A SINE B4 91 274 -18 2 1066 417 39 0 0 chr15 63148352 63148403 -40346571 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1066 191 212 47 0 chr15 63148556 63148641 -40346333 + CT-rich Low_complexity Low_complexity 1 89 0 2 1066 241 373 0 18 chr15 63149016 63149128 -40345846 + RMER12 LTR ERVK 742 851 -471 2 1066 342 152 0 0 chr15 63149128 63149187 -40345787 + (CATA)n Simple_repeat Simple_repeat 2 60 0 2 1066 1450 304 59 36 chr15 63149475 63150089 -40344885 - Lx9 LINE L1 -452 7192 6565 2 1066 376 290 31 102 chr15 63150095 63150418 -40344556 + Lx9 LINE L1 7323 7622 -22 2 1066 300 309 31 21 chr15 63150801 63150897 -40344077 + Lx8 LINE L1 7215 7311 -162 2 1066 590 113 0 10 chr15 63151051 63151149 -40343825 + (TTTC)n Simple_repeat Simple_repeat 2 98 0 2 1066 229 268 0 18 chr15 63151910 63151967 -40343007 - B1F SINE Alu -58 91 36 2 1066 249 119 0 0 chr15 63152257 63152299 -40342675 + (TTAGGG)n Simple_repeat Simple_repeat 6 47 0 2 1066 307 372 32 13 chr15 63152473 63152631 -40342343 - HAL1-3A_ME LINE L1 -410 2448 2288 2 1066 1095 194 128 36 chr15 63152805 63153109 -40341865 - IAPEY3_LTR LTR ERVK 0 332 1 2 1066 1509 137 37 4 chr15 63153304 63153546 -40341428 - Lx LINE L1 -15 6639 6390 2 1066 561 276 135 91 chr15 63153659 63154022 -40340952 + MTEa LTR MaLR 1 379 0 2 1066 714 322 254 22 chr15 63154022 63154384 -40340590 + MTEa-int LTR MaLR 1 446 -1134 2 1066 784 240 23 6 chr15 63154386 63154558 -40340416 + MTEa-int LTR MaLR 574 748 -832 2 1066 1756 208 69 3 chr15 63154560 63154937 -40340037 + Lx9 LINE L1 7076 7477 -167 2 1066 528 16 0 0 chr15 63154937 63154998 -40339976 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1066 603 146 0 0 chr15 63155009 63155119 -40339855 + Lx9 LINE L1 7534 7643 -1 2 1066 1512 312 138 29 chr15 63155242 63155893 -40339081 + MTEa-int LTR MaLR 857 1578 -2 2 1066 324 62 0 0 chr15 63155993 63156041 -40338933 + Lx9 LINE L1 7534 7581 -63 2 1066 1167 318 25 15 chr15 63156073 63156479 -40338495 - ERVL-B4-int LTR ERVL -1143 4571 4162 2 1066 1477 319 90 13 chr15 63156476 63157272 -40337702 - ERVL-B4-int LTR ERVL -1724 4037 3055 2 1066 464 279 55 88 chr15 63157291 63157653 -40337321 + L1ME3 LINE L1 5703 6052 -110 2 1066 4349 107 8 15 chr15 63159336 63159992 -40334982 - Lx2 LINE L1 0 6997 6347 2 1066 38030 45 0 3 chr15 63160196 63166659 -40328315 - L1Md_T LINE L1 0 6585 44 2 1066 267 343 50 11 chr15 63166839 63167019 -40327955 - L1M5 LINE L1 -482 5758 5572 2 1066 640 296 67 58 chr15 63167364 63167532 -40327442 + Lx8 LINE L1 7141 7325 -148 2 1066 342 67 0 0 chr15 63167532 63167577 -40327397 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 2 1066 640 296 67 58 chr15 63167577 63167738 -40327236 + Lx8 LINE L1 7326 7473 0 2 1066 2031 206 35 118 chr15 63168357 63169024 -40325950 + RMER19C LTR ERVK 1 611 0 2 1066 1163 82 0 0 chr15 63169843 63169990 -40324984 + B1_Mm SINE Alu 1 147 0 2 1066 845 164 0 6 chr15 63169990 63170150 -40324824 + GA-rich Low_complexity Low_complexity 3 161 0 2 1066 770 232 36 68 chr15 63170994 63171046 -40323928 - B3 SINE B2 -1 215 170 2 1066 342 79 0 45 chr15 63171046 63171112 -40323862 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1066 770 232 36 68 chr15 63171112 63171281 -40323693 - B3 SINE B2 -47 169 1 2 1066 493 139 265 17 chr15 63173125 63173242 -40321732 + URR1B DNA MER1_type 80 225 0 2 1066 421 353 53 24 chr15 63173450 63173697 -40321277 - L3 LINE CR1 -87 4402 4149 2 1066 636 263 109 25 chr15 63173701 63173939 -40321035 + MIR SINE MIR 5 262 0 2 1066 236 369 101 65 chr15 63174086 63174393 -40320581 + MLT1J2 LTR MaLR 88 405 -43 2 1066 253 207 0 24 chr15 63175572 63175656 -40319318 + GA-rich Low_complexity Low_complexity 4 85 0 2 1067 603 29 0 0 chr15 63177195 63177263 -40317711 + L1Md_F2 LINE L1 5519 5586 -297 2 1067 7951 43 19 0 chr15 63177263 63178233 -40316741 + L1Md_F2 LINE L1 5587 6574 -8 2 1067 183 129 0 0 chr15 63178273 63178304 -40316670 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1067 213 167 48 0 chr15 63178487 63178529 -40316445 + CT-rich Low_complexity Low_complexity 4 47 0 2 1067 747 265 36 9 chr15 63179680 63179901 -40315073 - Tigger5 DNA MER2_type -17 2389 2163 2 1067 650 281 86 21 chr15 63179893 63180126 -40314848 - Tigger5 DNA MER2_type -2150 256 9 2 1067 605 137 8 0 chr15 63180126 63180243 -40314731 + (TG)n Simple_repeat Simple_repeat 2 119 0 2 1067 1504 167 44 45 chr15 63180249 63180694 -40314280 - RMER17C LTR ERVK -519 439 16 2 1067 312 290 91 163 chr15 63180700 63181161 -40313813 - LTR78 LTR ERV1 -181 1123 696 2 1067 253 47 47 0 chr15 63182090 63182133 -40312841 + (TTG)n Simple_repeat Simple_repeat 2 46 0 2 1067 261 297 29 66 chr15 63182727 63182813 -40312161 - MIRb SINE MIR -135 133 47 2 1067 6253 118 13 4 chr15 63182813 63183763 -40311211 + RMER17B LTR ERVK 1 958 0 2 1067 261 297 29 66 chr15 63183763 63183813 -40311161 - MIRb SINE MIR -222 46 3 2 1067 398 315 58 32 chr15 63184366 63184556 -40310418 + MER58B DNA MER1_type 147 341 0 2 1067 248 0 31 0 chr15 63186385 63186417 -40308557 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2 1067 1118 90 0 0 chr15 63186417 63186562 -40308412 - B1_Mus2 SINE Alu -2 145 1 2 1067 548 266 20 75 chr15 63186708 63186907 -40308067 + B3A SINE B2 11 198 0 2 1067 411 200 88 11 chr15 63187838 63187929 -40307045 + Lx9 LINE L1 7317 7414 -230 2 1067 363 194 0 0 chr15 63188823 63188921 -40306053 + CT-rich Low_complexity Low_complexity 1 98 0 2 1067 345 24 0 0 chr15 63188921 63188963 -40306011 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1067 432 0 0 0 chr15 63188963 63189010 -40305964 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 1067 1777 208 132 41 chr15 63189186 63189863 -40305111 - L1MC LINE L1 -2913 3233 2496 2 1067 237 83 0 0 chr15 63190565 63190601 -40304373 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1067 1893 224 38 32 chr15 63190907 63191409 -40303565 + Lx7 LINE L1 6914 7418 -278 2 1067 227 250 69 0 chr15 63191441 63191557 -40303417 + Lx7 LINE L1 7559 7682 -14 2 1067 22 0 0 0 chr15 63191668 63191690 -40303284 + AT_rich Low_complexity Low_complexity 1 22 0 2 1067 247 179 36 0 chr15 63192460 63192516 -40302458 + (TTCA)n Simple_repeat Simple_repeat 4 61 0 2 1067 1632 107 4 4 chr15 63192603 63192846 -40302128 + L1_Mus4 LINE L1 6361 6603 -33 2 1067 187 29 27 54 chr15 63192846 63192883 -40302091 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 2 1067 340 335 52 36 chr15 63193392 63193424 -40301550 - L1ME3A LINE L1 -9 6164 6139 2 1067 3071 70 14 0 chr15 63193424 63193839 -40301135 + BGLII LTR ERVK 1 421 0 2 1067 340 335 52 36 chr15 63193839 63193998 -40300976 - L1ME3A LINE L1 -35 6138 5970 2 1067 217 132 0 0 chr15 63194003 63194041 -40300933 + (TTTTTG)n Simple_repeat Simple_repeat 5 42 0 2 1067 1092 79 0 0 chr15 63194042 63194182 -40300792 - B1_Mus2 SINE Alu -6 141 2 2 1067 411 322 26 13 chr15 63195493 63195647 -40299327 + MER20 DNA MER1_type 64 219 0 2 1067 255 310 0 0 chr15 63196064 63196122 -40298852 - MIRc SINE MIR -128 140 83 2 1067 2715 159 32 14 chr15 63196883 63197381 -40297593 + Lx3C LINE L1 6457 6963 -13 2 1067 388 0 0 37 chr15 63197381 63197435 -40297539 + (TAA)n Simple_repeat Simple_repeat 2 53 0 2 1067 373 333 29 0 chr15 63198072 63198177 -40296797 + RSINE1 SINE B4 2 109 -56 2 1067 345 47 0 0 chr15 63198796 63198839 -40296135 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 1067 2144 249 110 84 chr15 63198840 63199586 -40295388 - Lx6 LINE L1 -44 7416 6652 3 1067 23 33 0 0 chr15 63199854 63199884 -40295090 + AT_rich Low_complexity Low_complexity 1 30 0 3 1067 963 291 36 3 chr15 63199954 63200285 -40294689 - L1M2 LINE L1 -1065 5078 4737 3 1067 577 340 25 33 chr15 63200357 63200631 -40294343 + B4A SINE B4 5 276 -16 3 1067 252 283 0 0 chr15 63200640 63200700 -40294274 + (CATATA)n Simple_repeat Simple_repeat 4 63 0 3 1067 295 273 83 69 chr15 63200740 63201004 -40293970 - MER57D LTR ERV1 -65 369 56 3 1067 561 271 158 0 chr15 63201087 63201220 -40293754 - B3A SINE B2 -42 156 3 3 1067 300 217 0 0 chr15 63201308 63201377 -40293597 + L1MB5 LINE L1 5901 5969 -205 3 1067 2234 292 51 81 chr15 63201468 63202462 -40292512 + Lx8 LINE L1 6472 7436 -37 3 1067 26 0 0 0 chr15 63204282 63204308 -40290666 + AT_rich Low_complexity Low_complexity 1 26 0 3 1067 291 221 125 10 chr15 63204894 63204990 -40289984 - MTEa LTR MaLR -116 263 157 3 1067 243 0 0 0 chr15 63204993 63205020 -40289954 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 3 1067 1026 59 37 0 chr15 63205023 63205159 -40289815 - B1_Mm SINE Alu -6 141 1 3 1067 4908 123 27 6 chr15 63205167 63205947 -40289027 - Lx2 LINE L1 0 6997 6202 3 1067 337 195 0 25 chr15 63205949 63206006 -40288968 + polypyrimidine Low_complexity Low_complexity 25 80 0 3 1067 1141 96 6 6 chr15 63206006 63206185 -40288789 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 3 1067 337 195 0 25 chr15 63206185 63206206 -40288768 + polypyrimidine Low_complexity Low_complexity 4 24 0 3 1067 689 158 0 15 chr15 63206206 63206341 -40288633 + CT-rich Low_complexity Low_complexity 4 136 0 3 1067 664 286 28 11 chr15 63206345 63206525 -40288449 - MTEa LTR MaLR -196 183 1 3 1067 27 49 0 0 chr15 63207449 63207490 -40287484 + AT_rich Low_complexity Low_complexity 1 41 0 3 1067 272 275 44 35 chr15 63208160 63208273 -40286701 - MLT1K LTR MaLR -5 590 477 3 1067 207 254 14 27 chr15 63208369 63208442 -40286532 + (TATG)n Simple_repeat Simple_repeat 2 73 0 3 1067 1042 256 156 20 chr15 63208464 63209006 -40285968 - L1MA9 LINE L1 -184 6128 5505 3 1067 3105 98 70 4 chr15 63210153 63210624 -40284350 + Lx LINE L1 6153 6654 0 3 1067 2759 45 0 0 chr15 63211694 63212029 -40282945 - L1Md_T LINE L1 -1 6581 6247 3 1067 243 333 50 20 chr15 63212061 63212162 -40282812 + MIRc SINE MIR 30 133 -135 3 1067 4086 44 0 0 chr15 63212457 63212953 -40282021 - L1Md_F2 LINE L1 -500 6082 5587 3 1067 4035 54 0 2 chr15 63212959 63213458 -40281516 + L1Md_F2 LINE L1 6074 6571 -11 3 1067 321 371 111 5 chr15 63213809 63214007 -40280967 - MER20 DNA MER1_type 0 219 1 3 1067 443 347 76 43 chr15 63214489 63214859 -40280115 + MLT1B LTR MaLR 1 382 -8 3 1067 387 0 0 0 chr15 63214947 63214990 -40279984 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1067 25 31 0 0 chr15 63215123 63215155 -40279819 + AT_rich Low_complexity Low_complexity 1 32 0 3 1067 205 292 0 58 chr15 63215287 63215356 -40279618 - MIR SINE MIR -120 142 78 3 1067 248 307 40 0 chr15 63216478 63216553 -40278421 - L1M4b LINE L1 -7135 199 122 3 1067 1658 46 65 0 chr15 63216837 63217054 -40277920 + L1Md_F3 LINE L1 6340 6570 -14 3 1067 951 276 123 33 chr15 63217243 63217722 -40277252 - L1ME2 LINE L1 -15 6149 5628 3 1067 330 220 44 0 chr15 63217725 63217816 -40277158 - L1ME2 LINE L1 -681 5481 5387 3 1067 200 216 0 0 chr15 63218063 63218100 -40276874 + (TATATG)n Simple_repeat Simple_repeat 6 42 0 3 1067 347 203 0 0 chr15 63218165 63218229 -40276745 - HAL1-3A_ME LINE L1 -824 2034 1971 3 1067 247 316 39 18 chr15 63218255 63218484 -40276490 - L1MEc LINE L1 -3942 2458 2225 3 1067 2558 295 67 33 chr15 63218494 63218921 -40276053 + Lx9 LINE L1 6447 6897 -747 3 1067 1969 177 13 40 chr15 63218921 63219298 -40275676 + ORR1B2 LTR MaLR 1 367 0 3 1067 2558 295 67 33 chr15 63219298 63219764 -40275210 + Lx9 LINE L1 6898 7374 -270 3 1067 1865 130 83 0 chr15 63219764 63220065 -40274909 - ORR1A2 LTR MaLR -1 326 1 3 1067 2558 295 67 33 chr15 63220065 63220206 -40274768 + Lx9 LINE L1 7375 7517 -127 3 1067 252 242 11 21 chr15 63220229 63220322 -40274652 + Lx9 LINE L1 7477 7568 -76 3 1067 902 301 128 39 chr15 63220530 63221544 -40273430 - L1MEc LINE L1 -4978 1422 319 3 1067 1792 250 47 91 chr15 63221604 63221683 -40273291 - Lx9 LINE L1 0 7644 7559 3 1067 501 47 0 0 chr15 63221683 63221747 -40273227 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 1067 432 0 0 0 chr15 63221747 63221794 -40273180 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 1067 1792 250 47 91 chr15 63221794 63222440 -40272534 - Lx9 LINE L1 -86 7558 6951 3 1067 246 368 0 0 chr15 63222471 63222596 -40272378 - L1MEc LINE L1 -6167 233 109 3 1067 29 0 0 0 chr15 63222635 63222664 -40272310 + AT_rich Low_complexity Low_complexity 1 29 0 3 1067 241 240 143 23 chr15 63222862 63223037 -40271937 - L1MA7 LINE L1 0 6291 6096 3 1067 1192 269 56 36 chr15 63223222 63223755 -40271219 - L1MA7 LINE L1 -351 5940 5397 3 1067 600 281 91 51 chr15 63223885 63224023 -40270951 - L1MA7 LINE L1 -859 5284 5146 3 1067 387 0 0 0 chr15 63224023 63224066 -40270908 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1067 600 281 91 51 chr15 63224066 63224389 -40270585 - L1MA7 LINE L1 -998 5145 4807 3 1067 198 0 0 0 chr15 63224389 63224411 -40270563 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3 1067 600 281 91 51 chr15 63224411 63224533 -40270441 - L1MA7 LINE L1 -1337 4806 4679 3 1067 579 110 0 0 chr15 63224675 63224713 -40270261 + (T)n Simple_repeat Simple_repeat 1 38 0 3 1067 1266 27 0 0 chr15 63224713 63224860 -40270114 - B1_Mus1 SINE Alu 0 148 2 3 1067 579 110 0 0 chr15 63224860 63224912 -40270062 + (T)n Simple_repeat Simple_repeat 1 52 0 3 1067 367 104 0 72 chr15 63224919 63225002 -40269972 - L1Md_A LINE L1 -7 6575 6499 3 1067 926 139 15 0 chr15 63225002 63225139 -40269835 - B1_Mur4 SINE Alu -11 139 1 3 1067 181 320 80 24 chr15 63225741 63225866 -40269108 - MIR SINE MIR -46 216 85 3 1067 427 266 124 81 chr15 63227613 63227871 -40267103 - Tigger7 DNA MER2_type -5 2486 2218 3 1067 531 286 171 6 chr15 63227902 63228078 -40266896 + B4A SINE B4 2 206 -86 3 1067 303 203 0 0 chr15 63228249 63228318 -40266656 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 3 1067 243 0 0 0 chr15 63228320 63228347 -40266627 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1067 1239 307 18 34 chr15 63228351 63228847 -40266127 - Lx7 LINE L1 -396 7300 6813 3 1067 409 305 33 39 chr15 63228842 63229023 -40265951 + Lx7 LINE L1 6268 6447 -1249 3 1067 186 133 0 0 chr15 63229136 63229166 -40265808 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1067 382 311 19 0 chr15 63229269 63229375 -40265599 - Tigger7 DNA MER2_type -2328 163 56 3 1067 521 350 113 29 chr15 63229438 63229818 -40265156 + MLT1F2 LTR MaLR 143 554 -6 3 1067 782 130 8 0 chr15 63229913 63230044 -40264930 + (TA)n Simple_repeat Simple_repeat 2 133 0 3 1067 319 356 60 8 chr15 63230129 63230262 -40264712 + MIRb SINE MIR 10 149 -119 3 1067 233 382 0 0 chr15 63230769 63230837 -40264137 - MER58A DNA MER1_type -156 68 1 3 1067 804 239 60 15 chr15 63230899 63231099 -40263875 + B3 SINE B2 2 210 -6 3 1067 913 130 207 16 chr15 63232815 63233003 -40261971 - URR1A DNA MER1_type 0 226 3 3 1067 353 304 186 81 chr15 63233331 63233765 -40261209 + MLT1E3 LTR MaLR 123 622 -5 3 1067 184 298 0 21 chr15 63233837 63233885 -40261089 - L4 LINE RTE -1744 285 239 3 1067 315 0 0 0 chr15 63233918 63233953 -40261021 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1067 214 273 146 0 chr15 63234052 63234107 -40260867 - L2a LINE L2 -2 3424 3323 3 1067 180 323 130 30 chr15 63234121 63234290 -40260684 - L2a LINE L2 -143 3244 3059 3 1067 327 85 0 0 chr15 63235424 63235471 -40259503 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1067 385 19 37 0 chr15 63235471 63235525 -40259449 + (GA)n Simple_repeat Simple_repeat 2 57 0 3 1067 276 265 0 0 chr15 63235668 63235736 -40259238 + Lx7 LINE L1 7287 7354 -342 3 1067 360 0 0 0 chr15 63235738 63235778 -40259196 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1067 593 188 19 107 chr15 63235787 63236002 -40258972 + Lx7 LINE L1 7456 7651 -45 3 1067 192 125 0 0 chr15 63236966 63236998 -40257976 + (A)n Simple_repeat Simple_repeat 1 32 0 3 1067 441 0 0 0 chr15 63237471 63237520 -40257454 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1067 342 326 63 26 chr15 63238139 63238328 -40256646 - MLT1M LTR MaLR -318 354 159 3 1067 244 266 62 0 chr15 63238406 63238470 -40256504 - MER58D DNA MER1_type -3 383 316 3 1067 201 123 43 58 chr15 63238498 63238567 -40256407 + (TTATA)n Simple_repeat Simple_repeat 1 68 0 3 1067 221 0 35 0 chr15 63238776 63238805 -40256169 + (TAGA)n Simple_repeat Simple_repeat 3 32 0 3 1067 3087 184 104 15 chr15 63238805 63238919 -40256055 + RMER17B LTR ERVK 236 355 -603 3 1067 491 0 17 0 chr15 63238919 63238978 -40255996 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 1067 3087 184 104 15 chr15 63238978 63239526 -40255448 + RMER17B LTR ERVK 356 956 -2 3 1067 419 73 15 0 chr15 63239526 63239594 -40255380 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 3 1067 711 302 18 39 chr15 63239799 63240085 -40254889 - B4A SINE B4 -11 281 2 3 1067 201 121 0 0 chr15 63240639 63240672 -40254302 + (TGGA)n Simple_repeat Simple_repeat 4 36 0 3 1067 26 0 0 0 chr15 63240747 63240773 -40254201 + AT_rich Low_complexity Low_complexity 1 26 0 3 1067 319 372 70 0 chr15 63240935 63241064 -40253910 + RSINE1 SINE B4 13 150 -15 3 1067 1119 56 0 0 chr15 63241065 63241208 -40253766 + (GAAA)n Simple_repeat Simple_repeat 4 146 0 3 1067 934 209 0 14 chr15 63241223 63241486 -40253488 + GA-rich Low_complexity Low_complexity 1 259 0 3 1067 1500 5 0 14 chr15 63241496 63241716 -40253258 + (GGAA)n Simple_repeat Simple_repeat 1 217 0 3 1067 216 250 16 0 chr15 63241720 63241784 -40253190 + GA-rich Low_complexity Low_complexity 4 68 0 3 1067 24 32 0 0 chr15 63241936 63241967 -40253007 + AT_rich Low_complexity Low_complexity 1 31 0 3 1067 339 255 51 45 chr15 63242368 63242524 -40252450 + Lx2B LINE L1 6843 6999 -1 3 1067 216 97 0 0 chr15 63243050 63243081 -40251893 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1067 350 273 71 40 chr15 63243801 63243927 -40251047 + RSINE1 SINE B4 3 132 -33 3 1067 29 28 0 0 chr15 63245332 63245368 -40249606 + AT_rich Low_complexity Low_complexity 1 36 0 3 1067 510 304 41 55 chr15 63245690 63245909 -40249065 + B3 SINE B2 1 216 0 3 1067 218 304 202 53 chr15 63245997 63246240 -40248734 + L2c LINE L2 3106 3384 -3 3 1067 187 347 57 45 chr15 63247538 63247695 -40247279 + MIRb SINE MIR 102 260 -8 3 1067 1166 315 63 34 chr15 63248000 63248553 -40246421 - Lx8 LINE L1 -262 7211 6643 4 1067 1524 276 103 12 chr15 63248555 63249218 -40245756 + L1_Mur3 LINE L1 4480 5202 -678 4 1067 267 313 0 74 chr15 63249257 63249378 -40245596 - ORR1E LTR MaLR -104 255 144 4 1067 523 335 32 54 chr15 63249445 63249631 -40245343 + B3A SINE B2 1 182 -16 4 1067 423 184 0 0 chr15 63249638 63249725 -40245249 + (CA)n Simple_repeat Simple_repeat 2 88 0 4 1067 1061 306 53 13 chr15 63249761 63250307 -40244667 + L1_Mur3 LINE L1 5287 5854 -26 4 1067 427 278 204 55 chr15 63250493 63250801 -40244173 + ORR1E LTR MaLR 4 357 -2 4 1067 229 321 107 0 chr15 63251282 63251391 -40243583 - L2c LINE L2 -22 3353 3238 4 1067 1459 199 77 15 chr15 63251395 63251721 -40243253 + Lx5 LINE L1 6699 7044 -6 4 1067 7994 38 0 1 chr15 63251797 63253381 -40241593 - L1Md_F2 LINE L1 0 6582 5000 4 1067 186 128 0 0 chr15 63253419 63253458 -40241516 + (T)n Simple_repeat Simple_repeat 1 39 0 4 1067 218 143 20 0 chr15 63253975 63254024 -40240950 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 1067 317 329 79 40 chr15 63254520 63254933 -40240041 + L1ME4a LINE L1 5537 5965 -159 4 1067 21 0 0 0 chr15 63255009 63255030 -40239944 + AT_rich Low_complexity Low_complexity 1 21 0 4 1067 514 352 80 31 chr15 63255181 63255407 -40239567 - LTR16A LTR ERVL -176 275 39 4 1067 21 36 0 0 chr15 63255962 63255990 -40238984 + AT_rich Low_complexity Low_complexity 1 28 0 4 1067 2809 73 0 49 chr15 63256012 63256418 -40238556 - L1_Mus2 LINE L1 0 6566 6181 4 1067 1227 56 6 0 chr15 63256418 63256578 -40238396 + L1_Mus2 LINE L1 5549 5709 -174 4 1067 1165 75 0 0 chr15 63256590 63256736 -40238238 + B1_Mus1 SINE Alu 3 148 0 4 1067 1007 86 203 39 chr15 63256751 63256933 -40238041 + L1_Mus2 LINE L1 5956 6167 -399 4 1067 4457 147 28 34 chr15 63257085 63258015 -40236959 + L1Md_T LINE L1 282 1205 -5411 4 1067 34840 31 0 0 chr15 63258021 63262439 -40232535 + L1Md_T LINE L1 1170 5586 -297 4 1067 7939 56 2 0 chr15 63262439 63263433 -40231541 + L1Md_T LINE L1 5587 6582 0 4 1067 233 247 14 0 chr15 63263612 63263685 -40231289 + MER2 DNA MER2_type 128 201 -144 4 1067 619 279 109 25 chr15 63263685 63263968 -40231006 + Lx7 LINE L1 5596 5902 -1794 4 1067 183 381 78 26 chr15 63264219 63264335 -40230639 - L2b LINE L2 -1 3374 3253 4 1067 2075 146 112 13 chr15 63264839 63265213 -40229761 + MTC LTR MaLR 1 411 -10 4 1067 488 310 30 0 chr15 63265855 63266052 -40228922 + L1MA4 LINE L1 5721 5923 -377 4 1067 267 282 69 121 chr15 63266604 63267052 -40227922 + L1ME1 LINE L1 5658 6082 -97 4 1067 243 323 22 80 chr15 63267215 63267353 -40227621 - MIR SINE MIR 0 268 132 4 1067 536 301 0 8 chr15 63268152 63268276 -40226698 + RSINE1 SINE B4 2 124 -41 4 1067 1768 102 18 0 chr15 63268407 63268692 -40226282 - L1_Mus2 LINE L1 -447 5436 5147 4 1067 6923 65 20 21 chr15 63268691 63269744 -40225230 + L1_Mus2 LINE L1 5513 6566 0 4 1067 450 36 0 0 chr15 63270189 63270245 -40224729 + (ATG)n Simple_repeat Simple_repeat 1 56 0 4 1067 225 317 39 29 chr15 63270645 63270749 -40224225 - MIRb SINE MIR -151 117 13 4 1067 792 298 16 25 chr15 63271840 63272079 -40222895 - MTC LTR MaLR -14 407 171 4 1067 719 147 47 0 chr15 63272079 63272208 -40222766 + RLTR31B_Mm LTR ERVK 1 135 -422 4 1067 929 219 35 96 chr15 63272208 63272551 -40222423 + RLTRETN_Mm LTR ERVK 1 322 0 4 1067 467 168 257 18 chr15 63272557 63272666 -40222308 + RLTR31B_Mm LTR ERVK 139 273 -288 4 1067 4537 126 37 7 chr15 63272666 63273416 -40221558 + L1Md_F LINE L1 265 1037 -5482 4 1067 301 287 176 0 chr15 63274390 63274498 -40220476 - HAL1-3A_ME LINE L1 -442 2416 2290 4 1067 225 365 67 0 chr15 63274681 63274785 -40220189 - MIRb SINE MIR -73 195 85 4 1067 1180 26 20 0 chr15 63275340 63275491 -40219483 + (TTTC)n Simple_repeat Simple_repeat 4 157 0 4 1067 695 330 7 43 chr15 63275491 63275767 -40219207 + ORR1D-int LTR MaLR 107 372 -998 4 1067 26 0 0 0 chr15 63277125 63277151 -40217823 + AT_rich Low_complexity Low_complexity 1 26 0 4 1067 423 0 0 0 chr15 63278292 63278339 -40216635 + (AATAG)n Simple_repeat Simple_repeat 3 49 0 4 1067 2206 300 105 19 chr15 63278571 63279855 -40215119 + Lx8 LINE L1 5881 7292 -181 4 1067 357 24 0 0 chr15 63280003 63280045 -40214929 + (TTA)n Simple_repeat Simple_repeat 1 42 0 4 1067 189 0 0 0 chr15 63280085 63280106 -40214868 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1067 22 0 0 0 chr15 63280199 63280221 -40214753 + AT_rich Low_complexity Low_complexity 1 22 0 4 1067 899 207 6 0 chr15 63280258 63280437 -40214537 + Lx5 LINE L1 5828 6007 -1043 4 1067 4351 189 37 1 chr15 63280444 63281249 -40213725 + Lx5 LINE L1 6209 7042 -8 4 1067 470 206 18 24 chr15 63281669 63281838 -40213136 + (CATA)n Simple_repeat Simple_repeat 4 171 0 4 1067 23 0 0 0 chr15 63284414 63284437 -40210537 + AT_rich Low_complexity Low_complexity 1 23 0 4 1067 315 0 0 0 chr15 63284528 63284563 -40210411 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1067 2325 37 44 0 chr15 63284979 63285274 -40209700 - L1_Mus1 LINE L1 -4 6563 6256 4 1067 1215 269 133 42 chr15 63285503 63286600 -40208374 - Lx6 LINE L1 -26 7434 5985 4 1067 451 205 59 8 chr15 63286596 63286714 -40208260 + Lx6 LINE L1 5860 5983 -1477 4 1067 202 386 73 44 chr15 63287211 63287417 -40207557 - MIR SINE MIR -30 232 21 4 1067 228 135 0 0 chr15 63288259 63288296 -40206678 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 4 1067 336 280 78 20 chr15 63288297 63288399 -40206575 + PB1D10 SINE Alu 2 109 -8 4 1067 253 276 97 48 chr15 63288473 63288576 -40206398 + MIR SINE MIR 33 140 -122 4 1067 684 93 0 0 chr15 63288626 63288723 -40206251 + (TAAAA)n Simple_repeat Simple_repeat 4 100 0 4 1067 255 292 68 42 chr15 63288988 63289106 -40205868 + LTR16A LTR ERVL 331 451 0 4 1067 481 344 106 20 chr15 63289228 63289427 -40205547 - MER20 DNA MER1_type 0 219 4 4 1067 5361 8 0 0 chr15 63289733 63290326 -40204648 + L1Md_T LINE L1 5990 6582 0 4 1067 22 0 0 0 chr15 63290326 63290348 -40204626 + AT_rich Low_complexity Low_complexity 1 22 0 4 1067 1419 241 94 27 chr15 63290522 63290935 -40204039 + Lx6 LINE L1 6993 7433 -27 4 1067 271 107 17 35 chr15 63290941 63290999 -40203975 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 4 1067 23 0 0 0 chr15 63291137 63291160 -40203814 + AT_rich Low_complexity Low_complexity 1 23 0 4 1067 203 354 0 0 chr15 63291756 63291835 -40203139 + (CATATA)n Simple_repeat Simple_repeat 2 80 0 4 1067 2246 91 21 50 chr15 63292304 63292641 -40202333 + ORR1A2 LTR MaLR 1 327 0 4 1067 284 219 31 0 chr15 63295984 63296048 -40198926 - MER58C DNA MER1_type 0 215 150 4 1067 387 0 0 0 chr15 63296460 63296503 -40198471 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 4 1067 3516 20 2 0 chr15 63296504 63296899 -40198075 + MTA_Mm LTR MaLR 1 396 0 4 1067 1865 131 24 68 chr15 63297203 63297539 -40197435 + ORR1A4 LTR MaLR 1 321 -8 4 1067 192 77 0 0 chr15 63297642 63297668 -40197306 + (CTG)n Simple_repeat Simple_repeat 1 26 0 4 1067 319 216 28 43 chr15 63297836 63297946 -40197028 + MTD LTR MaLR 94 201 -128 4 1067 2312 145 32 20 chr15 63298100 63298502 -40196472 + MTB_Mm LTR MaLR 1 407 0 4 1067 678 172 139 12 chr15 63298797 63298962 -40196012 + Lx3B LINE L1 6788 6973 0 4 1067 31 26 0 0 chr15 63298962 63299000 -40195974 + AT_rich Low_complexity Low_complexity 1 38 0 4 1067 572 171 179 0 chr15 63299130 63299253 -40195721 + MTD LTR MaLR 230 374 -45 4 1067 224 77 26 0 chr15 63299259 63299298 -40195676 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 1067 5578 147 33 64 chr15 63299304 63300497 -40194477 + Lx3B LINE L1 5783 6938 -35 4 1067 528 88 50 50 chr15 63300498 63300617 -40194357 + Lx LINE L1 6530 6648 -6 4 1067 23 33 0 0 chr15 63300710 63300740 -40194234 + AT_rich Low_complexity Low_complexity 1 30 0 4 1067 382 328 68 91 chr15 63300783 63300982 -40193992 - ORR1E LTR MaLR -2 357 166 4 1067 189 0 0 0 chr15 63300982 63301003 -40193971 + (GA)n Simple_repeat Simple_repeat 1 21 0 4 1067 382 328 68 91 chr15 63301003 63301155 -40193819 - ORR1E LTR MaLR -194 165 14 4 1067 920 101 0 0 chr15 63301836 63301984 -40192990 + L1Md_F3 LINE L1 6437 6584 0 4 1067 207 0 0 0 chr15 63302451 63302474 -40192500 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1067 219 135 75 19 chr15 63302876 63302929 -40192045 + (TATATG)n Simple_repeat Simple_repeat 5 60 0 4 1067 322 43 57 14 chr15 63302981 63303051 -40191923 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 4 1067 21 57 0 0 chr15 63303193 63303228 -40191746 + AT_rich Low_complexity Low_complexity 1 35 0 4 1067 585 0 0 0 chr15 63303701 63303766 -40191208 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 4 1067 236 234 101 25 chr15 63303766 63303845 -40191129 + MTEa LTR MaLR 16 100 -279 4 1067 1597 68 14 5 chr15 63303845 63304068 -40190906 + L1_Mus2 LINE L1 5854 6078 -488 4 1067 1158 199 121 4 chr15 63304090 63304347 -40190627 - MTD LTR MaLR -4 415 129 4 1067 342 0 0 0 chr15 63304348 63304386 -40190588 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1067 654 125 42 0 chr15 63304396 63304540 -40190434 + (TAGA)n Simple_repeat Simple_repeat 1 150 0 4 1067 199 156 0 0 chr15 63304592 63304624 -40190350 - MIRc SINE MIR -159 109 78 4 1067 285 29 0 0 chr15 63305512 63305546 -40189428 + (CATA)n Simple_repeat Simple_repeat 1 34 0 4 1067 255 306 24 0 chr15 63306193 63306278 -40188696 + MTE2b LTR MaLR 291 377 -2 4 1067 27 0 0 0 chr15 63306333 63306360 -40188614 + AT_rich Low_complexity Low_complexity 1 27 0 4 1067 347 371 60 47 chr15 63306747 63306962 -40188012 + MER20 DNA MER1_type 2 219 0 4 1067 203 291 122 37 chr15 63307048 63307155 -40187819 + MIRc SINE MIR 63 178 -90 4 1068 22 35 0 0 chr15 63307884 63307913 -40187061 + AT_rich Low_complexity Low_complexity 1 29 0 4 1068 306 237 65 13 chr15 63308198 63308275 -40186699 + MTEa LTR MaLR 2 82 -297 4 1068 229 300 20 0 chr15 63308304 63308322 -40186652 + polypyrimidine Low_complexity Low_complexity 85 103 0 4 1068 894 74 7 14 chr15 63308322 63308460 -40186514 + (TTCTC)n Simple_repeat Simple_repeat 5 141 0 4 1068 229 300 20 0 chr15 63308460 63308541 -40186433 + CT-rich Low_complexity Low_complexity 3 84 0 4 1068 626 272 57 11 chr15 63308560 63308735 -40186239 + MTEa LTR MaLR 197 379 0 4 1068 426 388 43 46 chr15 63309038 63309454 -40185520 - L1ME3B LINE L1 -356 5884 5470 5 1068 190 257 23 35 chr15 63312040 63312126 -40182848 + MIRc SINE MIR 102 182 -80 5 1068 349 274 51 31 chr15 63312210 63312308 -40182666 + ID_B1 SINE B4 114 213 -11 5 1068 328 229 65 143 chr15 63312321 63312514 -40182460 - RLTR25B LTR ERVK -56 972 750 5 1068 190 220 39 20 chr15 63312646 63312697 -40182277 + MIR SINE MIR 102 153 -109 5 1068 259 211 19 0 chr15 63312771 63312823 -40182151 - U7 snRNA snRNA -3 60 8 5 1068 4601 174 38 6 chr15 63312795 63313664 -40181310 - RLTR25A LTR ERVK -206 897 1 5 1068 1358 235 103 6 chr15 63314962 63315292 -40179682 + ORR1D2 LTR MaLR 9 370 0 5 1068 217 225 0 0 chr15 63315812 63315852 -40179122 + MIR3 SINE MIR 159 198 -10 5 1068 216 86 0 0 chr15 63316526 63316561 -40178413 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 5 1068 313 288 110 13 chr15 63316797 63316952 -40178022 + L1MB8 LINE L1 6003 6172 -6 5 1068 248 158 39 29 chr15 63317141 63317245 -40177729 + (TCTCTG)n Simple_repeat Simple_repeat 4 108 0 5 1068 796 144 0 22 chr15 63317262 63317446 -40177528 + CT-rich Low_complexity Low_complexity 1 180 0 5 1068 1001 308 67 17 chr15 63317795 63318188 -40176786 + MTD LTR MaLR 2 404 -15 5 1068 596 323 12 24 chr15 63318219 63318384 -40176590 + RSINE1 SINE B4 3 165 0 5 1068 342 0 0 0 chr15 63318427 63318465 -40176509 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 5 1068 291 121 0 0 chr15 63319221 63319279 -40175695 + (T)n Simple_repeat Simple_repeat 1 58 0 5 1068 1142 76 0 0 chr15 63319280 63319425 -40175549 - B1_Mus2 SINE Alu 0 147 3 5 1068 416 319 23 70 chr15 63319936 63320108 -40174866 - ID_B1 SINE B4 -24 200 37 5 1068 245 266 62 31 chr15 63320451 63320548 -40174426 - B4 SINE B4 -191 101 2 5 1068 387 275 91 66 chr15 63321806 63322230 -40172744 + L1MDa LINE L1 2341 2604 -4029 5 1068 2530 150 68 56 chr15 63324936 63325437 -40169537 - RMER15 LTR ERVL -57 518 12 5 1068 276 295 11 11 chr15 63325626 63325715 -40169259 - B4A SINE B4 -203 89 1 5 1068 271 315 158 14 chr15 63327149 63327371 -40167603 - MamRep605 Unknown Unknown -263 613 360 5 1068 1341 80 116 0 chr15 63327804 63328003 -40166971 - URR1A DNA MER1_type 0 226 5 5 1068 270 0 0 0 chr15 63328103 63328133 -40166841 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 5 1068 420 286 3 14 chr15 63328405 63328508 -40166466 + B1_Mur2 SINE Alu 35 137 -12 5 1068 477 0 0 0 chr15 63328508 63328561 -40166413 + (TAAAA)n Simple_repeat Simple_repeat 4 56 0 5 1068 1011 124 6 11 chr15 63328569 63328748 -40166226 + (GAA)n Simple_repeat Simple_repeat 3 180 0 5 1068 189 0 0 0 chr15 63328849 63328870 -40166104 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1068 374 285 48 85 chr15 63329112 63329138 -40165836 + B4A SINE B4 66 154 -138 5 1068 1054 72 0 0 chr15 63329138 63329276 -40165698 + B1_Mus1 SINE Alu 6 143 -5 5 1068 374 285 48 85 chr15 63329276 63329300 -40165674 + B4A SINE B4 155 246 -46 5 1068 422 129 24 0 chr15 63329300 63329385 -40165589 + Lx2B LINE L1 6064 6150 -850 5 1068 1142 76 7 0 chr15 63329398 63329543 -40165431 + B1_Mm SINE Alu 2 147 0 5 1068 675 107 26 26 chr15 63329757 63329910 -40165064 + (TAGA)n Simple_repeat Simple_repeat 2 154 0 5 1068 296 155 0 14 chr15 63329893 63329965 -40165009 + GA-rich Low_complexity Low_complexity 2 72 0 5 1068 247 368 51 0 chr15 63330437 63330554 -40164420 - L2b LINE L2 -9 3366 3244 5 1068 248 284 56 22 chr15 63331770 63331860 -40163114 + L2a LINE L2 3334 3426 0 5 1068 182 217 40 80 chr15 63332487 63332562 -40162412 - MIRc SINE MIR -168 100 29 5 1068 1032 259 38 3 chr15 63333232 63333523 -40161451 + Lx2B LINE L1 6700 7000 0 5 1068 481 165 0 35 chr15 63333919 63334032 -40160942 + CT-rich Low_complexity Low_complexity 4 112 0 5 1068 333 0 0 0 chr15 63334532 63334569 -40160405 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 5 1068 1220 64 0 0 chr15 63334569 63334726 -40160248 - B2_Mm2 SINE B2 -38 157 1 5 1068 426 291 137 74 chr15 63335091 63335362 -40159612 - B4A SINE B4 -3 289 2 5 1068 1181 291 71 95 chr15 63335504 63336135 -40158839 + RLTR18 LTR ERVK 1 616 0 5 1068 465 263 34 0 chr15 63336349 63336467 -40158507 + ID_B1 SINE B4 82 203 -21 5 1068 353 312 56 0 chr15 63336356 63336481 -40158493 + B1F2 SINE Alu 10 141 -8 5 1068 418 329 80 84 chr15 63336780 63337042 -40157932 + B4 SINE B4 2 262 -30 5 1068 271 301 0 46 chr15 63338040 63338148 -40156826 - MIRb SINE MIR -49 219 117 5 1068 27 29 0 0 chr15 63338661 63338695 -40156279 + AT_rich Low_complexity Low_complexity 1 34 0 5 1068 218 174 0 0 chr15 63338907 63338937 -40156037 + T-rich Low_complexity Low_complexity 17 46 0 5 1068 264 59 0 0 chr15 63338937 63338971 -40156003 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 5 1068 218 174 0 0 chr15 63338971 63338986 -40155988 + T-rich Low_complexity Low_complexity 2 16 0 5 1068 2781 156 24 0 chr15 63338986 63339441 -40155533 + RLTR25A LTR ERVK 1 466 -637 5 1068 589 160 80 0 chr15 63339437 63339537 -40155437 + RLTR25A LTR ERVK 996 1103 0 5 1068 496 270 35 39 chr15 63339879 63340110 -40154864 - L1M3 LINE L1 -1932 4208 3979 5 1068 634 296 50 15 chr15 63340111 63340310 -40154664 + MTE2b LTR MaLR 1 206 -173 5 1068 903 208 0 21 chr15 63340392 63340633 -40154341 + L1_Rod LINE L1 1595 1830 -4017 5 1068 3213 302 96 48 chr15 63340633 63341008 -40153966 + MTE2b-int LTR MaLR 257 627 -953 5 1068 210 37 0 0 chr15 63341008 63341035 -40153939 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1068 3213 302 96 48 chr15 63341035 63341247 -40153727 + MTE2b-int LTR MaLR 628 878 -702 5 1068 369 0 0 0 chr15 63341247 63341288 -40153686 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1068 3213 302 96 48 chr15 63341288 63341956 -40153018 + MTE2b-int LTR MaLR 879 1573 -7 5 1068 374 341 24 0 chr15 63341962 63342088 -40152886 + MTE2b LTR MaLR 1 129 -250 5 1068 278 326 20 6 chr15 63342092 63342288 -40152686 - L1_Mur1 LINE L1 -1986 3894 3695 5 1068 22 0 0 0 chr15 63342556 63342578 -40152396 + AT_rich Low_complexity Low_complexity 1 22 0 5 1068 1300 190 230 28 chr15 63342942 63343364 -40151610 + Lx4B LINE L1 797 1303 -5681 5 1068 5905 206 21 5 chr15 63343362 63345003 -40149971 + Lx4B LINE L1 5273 6978 -3 5 1068 197 328 15 15 chr15 63345648 63345713 -40149261 + L2 LINE L2 429 493 -2926 5 1068 192 343 118 15 chr15 63347034 63347238 -40147736 + L2 LINE L2 1618 1842 -1577 5 1068 369 43 0 0 chr15 63348132 63348179 -40146795 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1068 222 347 128 8 chr15 63348249 63348374 -40146600 - MIR3 SINE MIR -58 150 11 5 1068 729 82 0 0 chr15 63349378 63349488 -40145486 + (TC)n Simple_repeat Simple_repeat 1 110 0 5 1068 330 26 0 0 chr15 63349488 63349526 -40145448 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1068 409 345 80 28 chr15 63349973 63350149 -40144825 - MLT1K LTR MaLR -10 585 401 5 1068 626 279 0 98 chr15 63350265 63350448 -40144526 + RSINE1 SINE B4 1 165 0 5 1068 346 165 31 8 chr15 63350449 63350577 -40144397 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 5 1068 2767 85 12 40 chr15 63351450 63351877 -40143097 + RLTR9F LTR ERVK 1 415 0 5 1068 401 357 62 16 chr15 63351935 63352177 -40142797 + MIR SINE MIR 9 261 -1 5 1068 241 273 25 25 chr15 63352183 63352262 -40142712 - MamRep137 DNA TcMar? -38 406 328 5 1068 282 288 68 110 chr15 63352447 63352638 -40142336 + MIR SINE MIR 11 193 -69 5 1068 278 342 9 0 chr15 63352653 63352767 -40142207 + GA-rich Low_complexity Low_complexity 2 116 0 5 1068 219 261 0 0 chr15 63354703 63354749 -40140225 + GA-rich Low_complexity Low_complexity 2 47 0 5 1068 642 26 0 0 chr15 63355900 63355976 -40138998 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 5 1068 1086 283 14 18 chr15 63356813 63357097 -40137877 + B4 SINE B4 2 284 -8 5 1068 432 0 0 0 chr15 63357130 63357178 -40137796 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 1068 219 259 0 0 chr15 63357233 63357291 -40137683 + (TTATA)n Simple_repeat Simple_repeat 5 62 0 5 1068 519 342 50 59 chr15 63358248 63358576 -40136398 + MER102b DNA MER1_type 1 298 -43 5 1068 231 114 0 0 chr15 63359112 63359147 -40135827 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1068 324 0 0 0 chr15 63359147 63359182 -40135792 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 1068 304 303 126 63 chr15 63359502 63359692 -40135282 + MLT2C2 LTR ERVL 88 289 -175 5 1068 266 287 105 81 chr15 63360507 63360755 -40134219 - MIR SINE MIR -2 266 9 5 1068 1011 254 111 33 chr15 63361768 63362130 -40132844 + Lx9 LINE L1 6803 7192 -452 5 1068 391 293 112 41 chr15 63362208 63362503 -40132471 + Lx9 LINE L1 7304 7619 -25 5 1068 498 46 0 0 chr15 63363121 63363186 -40131788 + (GA)n Simple_repeat Simple_repeat 2 66 0 5 1068 1536 184 13 146 chr15 63365169 63365628 -40129346 + RMER10B LTR ERVL 1 398 0 5 1068 347 355 0 36 chr15 63365653 63365764 -40129210 - PB1D10 SINE Alu -9 108 2 5 1068 316 224 55 31 chr15 63365779 63365906 -40129068 - Lx7 LINE L1 -4 7692 7585 5 1068 387 0 0 0 chr15 63366989 63367032 -40127942 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 1068 236 224 51 17 chr15 63367188 63367247 -40127727 - LTR50 LTR ERVL -18 777 717 5 1068 393 287 14 0 chr15 63367333 63367427 -40127547 + PB1D10 SINE Alu 13 107 -10 5 1068 257 333 159 12 chr15 63367504 63367674 -40127300 - LTR50 LTR ERVL -190 605 411 5 1068 311 332 177 28 chr15 63367702 63367950 -40127024 - LTR50 LTR ERVL -497 298 14 5 1068 212 269 62 25 chr15 63368084 63368164 -40126810 - MIR SINE MIR -67 195 113 5 1068 228 35 0 0 chr15 63369223 63369252 -40125722 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1068 288 0 0 0 chr15 63369252 63369284 -40125690 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 5 1068 590 290 28 17 chr15 63370320 63370499 -40124475 - RMER15 LTR ERVL -96 479 299 5 1068 1137 54 0 7 chr15 63371628 63371777 -40123197 + L1_Mus2 LINE L1 6417 6564 -2 5 1068 230 281 66 22 chr15 63372073 63372164 -40122810 - ORR1E LTR MaLR -264 95 1 5 1068 24 67 0 0 chr15 63372340 63372385 -40122589 + AT_rich Low_complexity Low_complexity 1 45 0 6 1068 195 42 0 0 chr15 63372972 63372996 -40121978 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1068 268 335 97 6 chr15 63373423 63373588 -40121386 + Lx7 LINE L1 7047 7226 -470 6 1068 426 307 119 34 chr15 63373910 63374146 -40120828 - ORR1E LTR MaLR -103 256 1 6 1068 725 227 209 21 chr15 63374891 63375125 -40119849 + B4A SINE B4 2 279 -13 6 1068 2025 132 28 12 chr15 63375199 63375521 -40119453 + ORR1A2 LTR MaLR 1 327 0 6 1068 246 207 107 24 chr15 63375938 63376022 -40118952 + MTEa LTR MaLR 276 366 -13 6 1068 633 358 98 59 chr15 63376188 63376627 -40118347 - MLT2B3 LTR ERVL -95 459 4 6 1068 237 331 124 21 chr15 63376632 63376777 -40118197 + L2a LINE L2 2705 2864 -555 6 1068 3092 188 35 12 chr15 63376904 63377479 -40117495 - RMER19C LTR ERVK -23 588 1 6 1068 322 299 54 38 chr15 63377705 63377889 -40117085 + Lx9 LINE L1 7266 7452 -192 6 1068 2387 66 16 6 chr15 63378002 63378322 -40116652 - L1Md_F2 LINE L1 0 6582 6260 6 1068 5247 41 10 2 chr15 63378324 63379079 -40115895 + L1Md_F2 LINE L1 5475 6248 -334 6 1068 29 28 0 0 chr15 63379086 63379122 -40115852 + AT_rich Low_complexity Low_complexity 1 36 0 6 1068 619 292 37 9 chr15 63379198 63379412 -40115562 - MLT2D LTR ERVL -194 220 1 6 1068 408 317 49 7 chr15 63379418 63379561 -40115413 + L2a LINE L2 3274 3422 -4 6 1068 3145 63 0 8 chr15 63380115 63380514 -40114460 - MTB LTR MaLR -2 398 3 6 1068 238 336 128 25 chr15 63381470 63381705 -40113269 + MLT1B LTR MaLR 116 374 -16 6 1068 1200 160 56 5 chr15 63382373 63382587 -40112387 - URR1B DNA MER1_type 0 225 1 6 1068 452 258 38 25 chr15 63382587 63382740 -40112234 + Charlie4a DNA MER1_type 33 189 -319 6 1068 308 319 41 25 chr15 63382741 63382863 -40112111 - MLT1A1 LTR MaLR 0 408 285 6 1068 286 291 146 0 chr15 63383151 63383254 -40111720 + Charlie4a DNA MER1_type 187 304 -204 6 1068 219 69 0 0 chr15 63383655 63383684 -40111290 + (CTG)n Simple_repeat Simple_repeat 2 30 0 6 1068 258 263 0 0 chr15 63383903 63383960 -40111014 - MER102c DNA MER1_type -1 330 274 6 1068 2903 78 16 0 chr15 63384176 63384562 -40110412 - L1_Mus2 LINE L1 -1 6565 6174 6 1068 660 116 23 15 chr15 63385877 63386008 -40108966 + (TATATG)n Simple_repeat Simple_repeat 2 133 0 6 1068 420 296 62 14 chr15 63386309 63386453 -40108521 - MIRb SINE MIR -115 153 3 6 1068 2031 187 26 48 chr15 63386542 63386958 -40108016 - MTB_Mm LTR MaLR 0 407 1 6 1068 184 211 66 66 chr15 63387527 63387588 -40107386 + L4 LINE RTE 230 290 -1739 6 1068 281 292 11 11 chr15 63387626 63387716 -40107258 + GA-rich Low_complexity Low_complexity 4 93 0 6 1068 579 360 26 13 chr15 63387872 63388103 -40106871 - MER102a DNA MER1_type -19 311 78 6 1068 405 0 0 0 chr15 63388103 63388148 -40106826 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1068 496 364 75 9 chr15 63388148 63388187 -40106787 - MER102c DNA MER1_type -285 46 7 6 1068 369 0 0 0 chr15 63388424 63388465 -40106509 + (CATA)n Simple_repeat Simple_repeat 4 44 0 6 1068 407 288 8 85 chr15 63389100 63389229 -40105745 - ID_B1 SINE B4 -16 208 90 6 1068 271 321 84 12 chr15 63389305 63389472 -40105502 + RMER4A LTR ERVK 8 186 -280 6 1068 189 368 47 9 chr15 63390684 63390791 -40104183 + MIRc SINE MIR 23 133 -135 6 1068 226 295 0 13 chr15 63390990 63391069 -40103905 - Lx8 LINE L1 -282 7191 7114 6 1068 230 320 39 0 chr15 63391150 63391228 -40103746 - ID4_ SINE ID -1 82 2 6 1068 339 25 0 0 chr15 63391237 63391277 -40103697 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 6 1068 979 301 30 93 chr15 63391315 63391990 -40102984 + Lx9 LINE L1 6886 7517 -127 6 1068 189 171 0 0 chr15 63391990 63392025 -40102949 + (TATATG)n Simple_repeat Simple_repeat 6 40 0 6 1068 948 156 0 0 chr15 63392049 63392229 -40102745 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 1068 4310 148 29 35 chr15 63392453 63393363 -40101611 + L1Md_T LINE L1 302 1205 -5411 6 1068 34748 32 0 0 chr15 63393369 63397785 -40097189 + L1Md_T LINE L1 1170 5586 -297 6 1068 8067 53 0 0 chr15 63397785 63398781 -40096193 + L1Md_T LINE L1 5587 6582 0 6 1068 32 43 0 0 chr15 63398808 63398854 -40096120 + AT_rich Low_complexity Low_complexity 1 46 0 6 1068 272 362 79 51 chr15 63399274 63399303 -40095671 - B4 SINE B4 0 292 268 6 1068 423 0 0 0 chr15 63399303 63399350 -40095624 + (GA)n Simple_repeat Simple_repeat 1 47 0 6 1068 272 362 79 51 chr15 63399350 63399573 -40095401 - B4 SINE B4 -25 267 33 6 1068 1201 55 0 0 chr15 63400234 63400380 -40094594 + B1_Mm SINE Alu 2 147 0 6 1068 2880 49 0 3 chr15 63400494 63400841 -40094133 + ORR1A0 LTR MaLR 1 346 0 6 1068 356 280 47 16 chr15 63401240 63401367 -40093607 - MER5A DNA MER1_type -51 138 8 6 1068 189 331 159 16 chr15 63401370 63401496 -40093478 + MER5B DNA MER1_type 20 163 -15 6 1068 254 189 62 75 chr15 63401746 63401826 -40093148 - MLT1F2 LTR MaLR -23 444 366 6 1068 876 351 88 19 chr15 63401812 63402175 -40092799 - MLT1F2 LTR MaLR -154 406 19 6 1068 234 0 0 0 chr15 63403124 63403150 -40091824 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1068 245 231 118 44 chr15 63403150 63403218 -40091756 - MLT1D LTR MaLR -432 73 1 6 1068 788 80 89 0 chr15 63404025 63404137 -40090837 + B1_Mus1 SINE Alu 27 148 0 6 1068 200 31 62 0 chr15 63404138 63404170 -40090804 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1068 900 0 0 0 chr15 63404168 63404268 -40090706 + (GAA)n Simple_repeat Simple_repeat 2 101 0 6 1068 1059 94 0 0 chr15 63404271 63404451 -40090523 + (GGA)n Simple_repeat Simple_repeat 1 180 0 6 1068 676 150 6 11 chr15 63404452 63404544 -40090430 + polypurine Low_complexity Low_complexity 2 94 0 6 1068 996 106 0 0 chr15 63404544 63404723 -40090251 + (GGA)n Simple_repeat Simple_repeat 2 180 0 6 1068 676 150 6 11 chr15 63404723 63404805 -40090169 + polypurine Low_complexity Low_complexity 95 175 0 6 1068 2399 154 171 52 chr15 63405473 63405987 -40088987 + RMER15 LTR ERVL 1 575 0 6 1068 1233 252 65 40 chr15 63406998 63407349 -40087625 + ORR1D2 LTR MaLR 7 366 -4 6 1068 285 338 0 13 chr15 63407732 63407807 -40087167 + RSINE1 SINE B4 82 155 -10 6 1068 423 0 0 0 chr15 63407814 63407861 -40087113 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1068 2967 68 38 2 chr15 63408306 63408703 -40086271 + L1Md_F2 LINE L1 6170 6580 -2 6 1068 24 0 0 0 chr15 63410060 63410084 -40084890 + AT_rich Low_complexity Low_complexity 1 24 0 6 1068 221 286 0 0 chr15 63410980 63411036 -40083938 - MIRm SINE MIR 0 276 221 6 1068 353 207 11 0 chr15 63411101 63411188 -40083786 + (TA)n Simple_repeat Simple_repeat 1 88 0 6 1068 557 335 120 57 chr15 63412572 63412634 -40082340 - MLT1C LTR MaLR -9 458 386 6 1068 3474 41 0 0 chr15 63412634 63413050 -40081924 + L1Md_T LINE L1 6167 6582 0 6 1068 557 335 120 57 chr15 63413050 63413411 -40081563 - MLT1C LTR MaLR -82 385 8 6 1068 1807 86 0 15 chr15 63414430 63414690 -40080284 + L1Md_F2 LINE L1 6327 6582 0 6 1068 453 161 105 0 chr15 63414704 63414828 -40080146 + Lx9 LINE L1 7440 7576 -68 6 1068 690 221 0 0 chr15 63414896 63415032 -40079942 + B1_Mus1 SINE Alu 1 136 -12 6 1068 258 32 0 0 chr15 63415034 63415065 -40079909 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 6 1068 182 214 0 23 chr15 63415293 63415336 -40079638 + MIR SINE MIR 103 144 -64 6 1068 295 371 75 31 chr15 63415428 63415656 -40079318 + MIR SINE MIR 13 250 -12 6 1068 27 73 0 0 chr15 63416048 63416103 -40078871 + AT_rich Low_complexity Low_complexity 1 55 0 6 1068 824 277 103 4 chr15 63416434 63416666 -40078308 - ORR1D2 LTR MaLR 0 370 116 6 1068 2661 189 47 2 chr15 63416757 63417334 -40077640 - L1_Mur2 LINE L1 -1471 4406 3804 6 1068 6593 31 2 12 chr15 63417350 63418154 -40076820 + L1Md_F2 LINE L1 5783 6578 -4 6 1068 1032 119 11 6 chr15 63418154 63418332 -40076642 + (GAA)n Simple_repeat Simple_repeat 2 180 0 6 1068 473 174 16 24 chr15 63418332 63418417 -40076557 + polypurine Low_complexity Low_complexity 1 85 0 6 1068 1200 111 0 0 chr15 63418417 63418597 -40076377 + (GAA)n Simple_repeat Simple_repeat 1 180 0 6 1068 473 174 16 24 chr15 63418597 63418635 -40076339 + polypurine Low_complexity Low_complexity 86 123 0 6 1068 657 169 9 141 chr15 63418637 63418864 -40076110 - L1_Mur2 LINE L1 -2355 3525 3329 6 1068 1241 190 15 40 chr15 63418870 63419174 -40075800 - RMER19B LTR ERVK -1 901 335 6 1068 4704 186 89 12 chr15 63419180 63420310 -40074664 + L1_Mur3 LINE L1 4408 5624 -256 6 1068 2577 152 18 2 chr15 63420293 63420657 -40074317 + L1_Mur2 LINE L1 4296 4663 -1214 6 1068 188 35 35 0 chr15 63420657 63420686 -40074288 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 6 1068 2577 152 18 2 chr15 63420686 63420809 -40074165 + L1_Mur2 LINE L1 4664 4790 -1087 6 1068 1690 253 50 43 chr15 63420816 63421914 -40073060 + L1Md_F LINE L1 1 742 -5777 6 1068 7576 64 1 1 chr15 63421911 63423452 -40071522 + L1_Mus1 LINE L1 5022 6562 -5 6 1068 581 287 168 12 chr15 63423512 63423833 -40071141 + L1MA7 LINE L1 5384 5754 -537 6 1068 654 269 62 24 chr15 63423855 63424145 -40070829 + L1MA7 LINE L1 5868 6168 -123 6 1068 2786 233 50 90 chr15 63424154 63425064 -40069910 + Lx7 LINE L1 6437 7309 -387 6 1068 263 207 43 43 chr15 63425064 63425180 -40069794 + T-rich Low_complexity Low_complexity 3 118 0 6 1068 821 147 6 0 chr15 63425195 63425365 -40069609 + GA-rich Low_complexity Low_complexity 2 172 0 6 1068 609 244 119 0 chr15 63425669 63425845 -40069129 + B4A SINE B4 78 274 -18 6 1068 320 128 0 114 chr15 63426234 63426313 -40068661 + Lx9 LINE L1 6922 6991 -653 6 1068 623 150 110 35 chr15 63426328 63426473 -40068501 + Lx3A LINE L1 6820 6975 -6 6 1068 27 39 0 19 chr15 63426476 63426494 -40068480 + AT_rich Low_complexity Low_complexity 1 18 0 6 1068 798 121 92 31 chr15 63426494 63426690 -40068284 + Lx9 LINE L1 7431 7638 -6 6 1068 27 39 0 19 chr15 63426690 63426723 -40068251 + AT_rich Low_complexity Low_complexity 1 33 0 6 1068 243 0 0 0 chr15 63426808 63426835 -40068139 + (TA)n Simple_repeat Simple_repeat 1 27 0 6 1068 205 329 40 54 chr15 63427020 63427094 -40067880 - L2b LINE L2 -64 3311 3239 6 1068 444 67 0 0 chr15 63427651 63427711 -40067263 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 1068 693 299 10 68 chr15 63427970 63428279 -40066695 + B4A SINE B4 2 292 0 6 1068 420 321 7 48 chr15 63428620 63428767 -40066207 - B1F1 SINE Alu -8 141 1 7 1068 1081 254 93 12 chr15 63429448 63429695 -40065279 + B4 SINE B4 3 269 -23 7 1068 297 0 0 0 chr15 63429695 63429728 -40065246 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1068 369 0 0 0 chr15 63429728 63429768 -40065206 + (GA)n Simple_repeat Simple_repeat 2 42 0 7 1068 481 345 50 93 chr15 63429921 63430298 -40064676 + MLT2C1 LTR ERVL 17 377 -20 7 1068 310 310 43 34 chr15 63430305 63430422 -40064552 + MLT-int LTR MaLR 20 137 -1598 7 1068 542 288 87 94 chr15 63430940 63431054 -40063920 - MLT1E1 LTR MaLR -68 586 482 7 1068 4828 110 3 1 chr15 63431054 63431729 -40063245 - Lx2 LINE L1 0 6997 6322 7 1068 542 288 87 94 chr15 63431729 63431901 -40063073 - MLT1E1 LTR MaLR -173 481 302 7 1068 404 267 4 4 chr15 63432197 63432293 -40062681 + B4A SINE B4 2 98 -67 7 1068 200 225 0 0 chr15 63433665 63433705 -40061269 - MIRb SINE MIR -167 101 62 7 1068 192 316 137 57 chr15 63434221 63434345 -40060629 - L2b LINE L2 -49 3326 3193 7 1068 1127 201 38 26 chr15 63435817 63436083 -40058891 - RMER1C Other Other -307 1035 767 7 1068 1308 134 98 32 chr15 63436083 63436190 -40058784 + RMER1C Other Other 1026 1126 -216 7 1068 414 0 0 0 chr15 63436190 63436236 -40058738 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 7 1068 1308 134 98 32 chr15 63436236 63436413 -40058561 + RMER1C Other Other 1127 1329 -13 7 1068 547 277 19 12 chr15 63437317 63437478 -40057496 + ID_B1 SINE B4 63 224 0 7 1068 530 346 0 24 chr15 63438310 63438476 -40056498 + RSINE1 SINE B4 4 165 0 7 1068 246 345 68 44 chr15 63438570 63438822 -40056152 - L2b LINE L2 -461 2958 2701 7 1069 956 93 14 0 chr15 63440718 63440858 -40054116 + Lx2 LINE L1 6362 6503 -494 7 1069 5516 119 42 11 chr15 63440858 63441715 -40053259 + Lx LINE L1 5762 6645 -9 7 1069 21 0 0 0 chr15 63441863 63441884 -40053090 + AT_rich Low_complexity Low_complexity 1 21 0 7 1069 391 294 132 7 chr15 63441884 63442028 -40052946 + MER58B DNA MER1_type 174 335 -6 7 1069 210 71 0 0 chr15 63442809 63442837 -40052137 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 7 1069 180 200 0 0 chr15 63443129 63443169 -40051805 + A-rich Low_complexity Low_complexity 1 40 0 7 1069 256 229 53 99 chr15 63444279 63444410 -40050564 - MIRb SINE MIR -72 196 72 7 1069 252 59 0 0 chr15 63444885 63444919 -40050055 + (A)n Simple_repeat Simple_repeat 1 34 0 7 1069 360 138 0 0 chr15 63445126 63445191 -40049783 + (GA)n Simple_repeat Simple_repeat 2 66 0 7 1069 525 277 7 28 chr15 63445239 63445380 -40049594 - B1_Mur1 SINE Alu -9 140 3 7 1069 185 397 35 0 chr15 63447193 63447309 -40047665 + MIRb SINE MIR 138 257 -11 7 1069 706 116 34 0 chr15 63447540 63447687 -40047287 + (TC)n Simple_repeat Simple_repeat 2 153 0 7 1069 2187 57 0 14 chr15 63447781 63448066 -40046908 + L1_Mus1 LINE L1 6287 6567 0 7 1069 216 0 0 0 chr15 63449050 63449074 -40045900 + (A)n Simple_repeat Simple_repeat 1 24 0 7 1069 962 115 0 22 chr15 63449411 63449589 -40045385 + (GGA)n Simple_repeat Simple_repeat 2 175 0 7 1069 198 167 0 0 chr15 63449594 63449630 -40045344 + GA-rich Low_complexity Low_complexity 1 36 0 7 1069 1344 67 0 0 chr15 63449633 63449813 -40045161 + (GGA)n Simple_repeat Simple_repeat 1 180 0 7 1069 351 0 0 0 chr15 63449816 63449855 -40045119 + (GGAGAA)n Simple_repeat Simple_repeat 1 39 0 7 1069 1099 152 136 0 chr15 63450780 63450978 -40043996 + URR1A DNA MER1_type 1 225 -1 7 1069 769 291 21 39 chr15 63452148 63452431 -40042543 - B4A SINE B4 -14 278 1 7 1069 579 15 0 0 chr15 63452438 63452506 -40042468 + (TG)n Simple_repeat Simple_repeat 2 69 0 7 1069 244 301 77 39 chr15 63452712 63453017 -40041957 + L2c LINE L2 2824 3164 -223 7 1069 198 0 0 0 chr15 63453119 63453141 -40041833 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 7 1069 1374 171 4 16 chr15 63453682 63453926 -40041048 + Lx4A LINE L1 6791 7031 -27 7 1069 378 0 0 0 chr15 63453933 63453975 -40040999 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1069 1317 52 0 0 chr15 63454252 63454407 -40040567 - L1_Mus2 LINE L1 -262 6304 6150 7 1069 1921 61 4 4 chr15 63454407 63454654 -40040320 + L1_Mus2 LINE L1 6320 6566 0 7 1069 242 215 62 0 chr15 63454916 63454981 -40039993 + LTR33B LTR ERVL 423 491 -12 7 1069 259 292 17 1 chr15 63455103 63455194 -40039780 - AluG_3 SINE Alu -95 216 137 7 1069 288 91 0 0 chr15 63456403 63456447 -40038527 + (TTAA)n Simple_repeat Simple_repeat 1 44 0 7 1069 3329 209 55 0 chr15 63456447 63457080 -40037894 - Lx5 LINE L1 -15 7035 6368 7 1069 3256 48 15 0 chr15 63457237 63457631 -40037343 - MTB LTR MaLR 0 400 1 7 1069 540 30 0 0 chr15 63458446 63458512 -40036462 + (CCCTAA)n Simple_repeat Simple_repeat 1 66 0 7 1069 343 316 48 61 chr15 63459237 63459402 -40035572 + RSINE1 SINE B4 3 165 0 7 1069 863 256 5 15 chr15 63459503 63459705 -40035269 + B3 SINE B2 11 210 -6 7 1069 5084 65 3 18 chr15 63460704 63461367 -40033607 + L1Md_F2 LINE L1 5922 6574 -8 7 1069 2279 163 17 249 chr15 63461369 63462434 -40032540 + L1_Mur3 LINE L1 1162 1982 -3898 7 1069 4013 156 3 20 chr15 63462413 63463145 -40031829 + L1_Mur3 LINE L1 3736 4454 -1426 7 1069 326 165 0 12 chr15 63463797 63463877 -40031097 + GA-rich Low_complexity Low_complexity 2 80 0 7 1069 214 152 0 42 chr15 63464203 63464251 -40030723 + T-rich Low_complexity Low_complexity 2 47 0 7 1069 279 0 0 0 chr15 63464328 63464359 -40030615 + (A)n Simple_repeat Simple_repeat 1 31 0 7 1069 4120 181 19 25 chr15 63464416 63465279 -40029695 + L1_Mur3 LINE L1 4451 5307 -573 7 1069 2238 200 141 4 chr15 63465271 63465769 -40029205 + Lx6 LINE L1 6869 7434 -26 7 1069 2192 186 88 6 chr15 63465783 63466259 -40028715 + L1_Mur3 LINE L1 5279 5793 -87 7 1069 427 175 20 20 chr15 63466265 63466364 -40028610 + L1M5 LINE L1 5585 5683 -496 7 1069 1101 57 0 0 chr15 63466385 63466526 -40028448 + (GGGGA)n Simple_repeat Simple_repeat 5 145 0 7 1069 1368 67 0 0 chr15 63466527 63466707 -40028267 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 7 1069 327 234 0 0 chr15 63466897 63466961 -40028013 + ID4 SINE ID 3 66 -17 7 1069 456 19 0 0 chr15 63467534 63467587 -40027387 + (TG)n Simple_repeat Simple_repeat 1 53 0 7 1069 341 360 32 23 chr15 63467839 63468058 -40026916 + MIRb SINE MIR 22 242 -26 7 1069 649 298 102 0 chr15 63468641 63468876 -40026098 + B4 SINE B4 11 269 -23 7 1069 384 104 0 0 chr15 63468878 63468945 -40026029 + (CA)n Simple_repeat Simple_repeat 2 68 0 7 1069 433 339 85 0 chr15 63469409 63469633 -40025341 + L1MA8 LINE L1 5842 6084 -207 7 1069 22 35 0 0 chr15 63469726 63469755 -40025219 + AT_rich Low_complexity Low_complexity 1 29 0 7 1069 618 254 88 76 chr15 63470030 63470268 -40024706 - B4A SINE B4 -1 291 51 7 1069 372 22 0 0 chr15 63470384 63470429 -40024545 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 1069 209 246 15 0 chr15 63470608 63470673 -40024301 - MIRc SINE MIR -18 250 185 7 1069 501 316 66 0 chr15 63471451 63471603 -40023371 - B3A SINE B2 -36 162 1 7 1069 403 345 93 3 chr15 63471622 63471956 -40023018 + L1MEg LINE L1 726 1089 -5153 7 1069 287 308 90 37 chr15 63472007 63472307 -40022667 + L1MEg LINE L1 2273 2588 -3558 7 1069 226 276 120 20 chr15 63472546 63472646 -40022328 + L1MEg LINE L1 2644 2753 -3393 7 1069 4608 77 37 3 chr15 63472740 63473366 -40021608 + L1_Mus3 LINE L1 5991 6637 -1 7 1069 2409 79 72 27 chr15 63473548 63473674 -40021300 - Lx LINE L1 0 6654 6534 7 1069 180 0 0 0 chr15 63473674 63473694 -40021280 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 7 1069 2409 79 72 27 chr15 63473694 63473942 -40021032 - Lx LINE L1 -121 6533 6265 7 1069 238 314 126 49 chr15 63474315 63474738 -40020236 + L1MEg LINE L1 4457 4918 -1228 7 1069 760 256 64 5 chr15 63474738 63474942 -40020032 - B3 SINE B2 0 216 1 7 1069 238 314 126 49 chr15 63474942 63474982 -40019992 + L1MEg LINE L1 4919 4980 -1166 7 1069 441 0 0 0 chr15 63474982 63475031 -40019943 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1069 238 314 126 49 chr15 63475031 63475199 -40019775 + L1MEg LINE L1 4981 5137 -1009 7 1069 1032 271 102 82 chr15 63475299 63475867 -40019107 - L1MA4 LINE L1 -141 6015 5423 7 1069 435 326 60 57 chr15 63475956 63476291 -40018683 + L1M2 LINE L1 3125 3460 -2683 7 1069 446 33 17 0 chr15 63476459 63476519 -40018455 + (CA)n Simple_repeat Simple_repeat 1 61 0 7 1069 8943 89 38 5 chr15 63476581 63477251 -40017723 + Lx3A LINE L1 5236 5909 -1072 7 1069 212 0 36 0 chr15 63477251 63477279 -40017695 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 7 1069 8943 88 64 6 chr15 63477279 63478262 -40016712 + Lx3A LINE L1 5910 6965 -16 7 1069 189 0 0 0 chr15 63478262 63478283 -40016691 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 7 1069 30 0 0 0 chr15 63478325 63478355 -40016619 + AT_rich Low_complexity Low_complexity 1 30 0 7 1069 439 324 7 14 chr15 63478368 63478512 -40016462 + RSINE1 SINE B4 4 146 -19 7 1069 297 140 0 0 chr15 63478512 63478569 -40016405 + (TGAA)n Simple_repeat Simple_repeat 3 59 0 7 1069 392 269 156 0 chr15 63478630 63478771 -40016203 + RSINE1 SINE B4 2 164 -1 7 1069 330 264 0 0 chr15 63478780 63479008 -40015966 + (CA)n Simple_repeat Simple_repeat 1 228 0 7 1069 292 233 7 7 chr15 63479055 63479202 -40015772 + (CA)n Simple_repeat Simple_repeat 2 148 0 7 1069 189 0 0 0 chr15 63479504 63479525 -40015449 + (CCCCCA)n Simple_repeat Simple_repeat 4 24 0 7 1069 242 319 118 57 chr15 63480344 63480590 -40014384 - L2a LINE L2 0 3426 3166 7 1069 228 35 0 0 chr15 63480676 63480705 -40014269 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1069 201 265 20 0 chr15 63482440 63482489 -40012485 + MIRb SINE MIR 117 166 -102 7 1069 575 339 73 9 chr15 63482829 63483145 -40011829 + L1MC4 LINE L1 7295 7630 -412 7 1069 672 160 0 0 chr15 63483289 63483408 -40011566 + (TA)n Simple_repeat Simple_repeat 1 119 0 7 1069 231 164 16 47 chr15 63483436 63483500 -40011474 + (TA)n Simple_repeat Simple_repeat 2 63 0 7 1069 421 218 63 52 chr15 63486437 63486611 -40008363 - MIRb SINE MIR -89 179 4 7 1069 403 257 75 48 chr15 63486655 63486802 -40008172 + B3A SINE B2 52 202 -14 7 1069 242 262 98 0 chr15 63486897 63486958 -40008016 + L2b LINE L2 3309 3375 0 7 1069 1760 75 59 0 chr15 63488587 63488826 -40006148 - L1_Mus1 LINE L1 0 6567 6315 7 1069 728 123 35 48 chr15 63491204 63491349 -40003625 - URR1B DNA MER1_type 0 225 83 7 1069 315 214 28 37 chr15 63491929 63492036 -40002938 - MLT1D LTR MaLR -1 504 399 7 1069 267 282 8 76 chr15 63492043 63492162 -40002812 + B3A SINE B2 8 118 -80 7 1069 254 342 150 24 chr15 63492162 63492289 -40002685 + B4 SINE B4 8 284 -8 8 1069 1051 270 25 18 chr15 63492645 63492931 -40002043 - B4A SINE B4 -4 288 1 8 1069 252 298 58 58 chr15 63492952 63493123 -40001851 + L2c LINE L2 2318 2488 -931 8 1069 279 277 73 32 chr15 63493462 63493585 -40001389 + L2c LINE L2 3067 3194 -193 8 1069 488 16 31 0 chr15 63493656 63493720 -40001254 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 8 1069 403 141 47 0 chr15 63493739 63493824 -40001150 + (CATA)n Simple_repeat Simple_repeat 3 91 0 8 1069 573 55 0 0 chr15 63494314 63494387 -40000587 + (CA)n Simple_repeat Simple_repeat 2 74 0 8 1069 1051 155 129 5 chr15 63494400 63494601 -40000373 + URR1A DNA MER1_type 1 226 0 8 1069 594 306 6 0 chr15 63494677 63494857 -40000117 + MT2A LTR ERVL 5 185 -348 8 1069 717 293 65 33 chr15 63494908 63495275 -39999699 - L1MB3 LINE L1 0 6183 5805 8 1069 259 250 26 0 chr15 63495759 63495835 -39999139 + Tigger5 DNA MER2_type 2291 2368 -38 8 1069 276 309 61 12 chr15 63495988 63496070 -39998904 - L1M4b LINE L1 -6746 588 503 8 1069 304 292 155 5 chr15 63496124 63496317 -39998657 + L2 LINE L2 2215 2436 -983 8 1069 2851 92 52 0 chr15 63496806 63497207 -39997767 + BGLII_Mus LTR ERVK 1 422 0 8 1069 487 235 195 70 chr15 63497776 63498032 -39996942 + B4A SINE B4 2 289 -3 8 1069 692 230 15 7 chr15 63498363 63498499 -39996475 + B1_Mur2 SINE Alu 3 139 -10 8 1069 438 69 0 0 chr15 63498859 63498917 -39996057 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 8 1069 509 302 89 1 chr15 63499716 63499959 -39995015 + L1M2 LINE L1 5015 5280 -863 8 1069 312 242 158 7 chr15 63500000 63500142 -39994832 + L1M2 LINE L1 5325 5486 -811 1 1069 1580 135 8 4 chr15 63500155 63500422 -39994552 + Lx2 LINE L1 6689 6956 -41 2 1069 1081 246 35 18 chr15 63500433 63500718 -39994256 + L1_Mur3 LINE L1 5406 5695 -185 3 1069 681 70 0 0 chr15 63501078 63501178 -39993796 + (TGG)n Simple_repeat Simple_repeat 1 100 0 4 1069 198 103 0 0 chr15 63501192 63501221 -39993753 + (CCCCCA)n Simple_repeat Simple_repeat 1 29 0 5 1069 287 312 43 0 chr15 63501332 63501425 -39993549 + PB1 SINE Alu 3 99 -28 6 1069 1646 205 61 14 chr15 63501769 63502130 -39992844 + ORR1C1 LTR MaLR 1 378 0 7 1069 332 219 24 24 chr15 63504308 63504392 -39990582 + B4 SINE B4 3 86 -206 8 1069 964 156 17 0 chr15 63504400 63504747 -39990227 + GA-rich Low_complexity Low_complexity 1 353 0 9 1069 759 279 13 89 chr15 63504760 63504984 -39989990 + B4 SINE B4 86 292 0 8 1069 561 171 0 0 chr15 63504984 63505101 -39989873 + (CA)n Simple_repeat Simple_repeat 1 117 0 1 1069 430 297 17 0 chr15 63505455 63505573 -39989401 - MTE2a LTR MaLR -259 120 1 1 1069 631 296 67 91 chr15 63505809 63506037 -39988937 + MLT1B LTR MaLR 18 253 -137 1 1069 591 289 5 34 chr15 63506037 63506241 -39988733 + B3A SINE B2 1 198 0 1 1069 631 296 67 91 chr15 63506241 63506387 -39988587 + MLT1B LTR MaLR 254 383 -7 1 1069 1233 119 120 38 chr15 63507902 63508111 -39986863 - URR1A DNA MER1_type 0 226 1 1 1069 4072 98 7 17 chr15 63508707 63509255 -39985719 + Lx LINE L1 6077 6627 -27 1 1069 4488 55 0 0 chr15 63509255 63509798 -39985176 + L1Md_F2 LINE L1 6034 6576 -6 1 1069 4072 98 7 17 chr15 63509798 63509829 -39985145 + Lx LINE L1 6628 6650 -4 1 1069 304 172 43 11 chr15 63510022 63510116 -39984858 + Lx LINE L1 6557 6653 -1 1 1069 507 82 0 0 chr15 63510840 63510913 -39984061 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 1069 252 0 0 0 chr15 63511186 63511214 -39983760 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 1 1069 691 233 19 19 chr15 63511327 63511489 -39983485 - Lx5 LINE L1 -180 6870 6709 2 1069 1420 190 165 30 chr15 63511559 63511928 -39983046 - MTD LTR MaLR 0 419 1 2 1069 225 279 14 29 chr15 63512819 63512889 -39982085 - MIR SINE MIR -85 177 109 2 1069 236 250 115 26 chr15 63512865 63512943 -39982031 + MIRc SINE MIR 20 107 -161 2 1069 895 266 104 4 chr15 63513305 63513584 -39981390 - MTE2b LTR MaLR -17 362 56 2 1069 235 276 13 0 chr15 63513710 63513786 -39981188 + (TG)n Simple_repeat Simple_repeat 1 77 0 2 1069 240 258 30 15 chr15 63513802 63513869 -39981105 - RSINE1 SINE B4 -87 78 11 2 1069 848 126 0 22 chr15 63513877 63514015 -39980959 - B1_Mus1 SINE Alu -5 143 9 2 1069 277 214 51 120 chr15 63513916 63514033 -39980941 - MT2B LTR ERVL -337 264 156 2 1069 764 216 0 7 chr15 63514041 63514181 -39980793 + B1_Mur1 SINE Alu 1 139 -10 2 1069 446 279 100 0 chr15 63514971 63515111 -39979863 + B4A SINE B4 122 275 -17 3 1069 335 263 86 14 chr15 63515621 63515760 -39979214 - L1MA9 LINE L1 -38 6274 6126 3 1069 862 144 74 48 chr15 63516284 63516473 -39978501 + B2_Mm2 SINE B2 1 194 -1 3 1069 381 132 24 24 chr15 63516475 63516560 -39978414 + GA-rich Low_complexity Low_complexity 6 90 0 3 1069 216 182 0 0 chr15 63517128 63517172 -39977802 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1069 405 250 0 0 chr15 63517712 63517788 -39977186 + ID4 SINE ID 2 77 -6 3 1069 26 0 0 0 chr15 63518595 63518621 -39976353 + AT_rich Low_complexity Low_complexity 1 26 0 3 1069 319 289 106 106 chr15 63519392 63519609 -39975365 - MER20 DNA MER1_type 0 219 3 3 1069 268 343 49 31 chr15 63519654 63519877 -39975097 + MIRb SINE MIR 30 260 -8 3 1069 951 269 136 3 chr15 63519989 63520306 -39974668 + ORR1E LTR MaLR 1 359 0 3 1069 1321 93 22 0 chr15 63520353 63520536 -39974438 - B2_Mm2 SINE B2 -8 187 1 4 1069 363 333 0 8 chr15 63521262 63521386 -39973588 + MER117 DNA MER1_type 57 179 -18 4 1069 242 347 40 40 chr15 63521718 63521844 -39973130 - L2c LINE L2 -195 3192 3067 4 1069 358 323 17 0 chr15 63522029 63522166 -39972808 + MIRc SINE MIR 16 154 -114 4 1069 305 289 78 17 chr15 63522190 63522306 -39972668 + MIR SINE MIR 10 132 -130 4 1069 1009 258 37 15 chr15 63522486 63522758 -39972216 + Lx7 LINE L1 7140 7417 -279 4 1069 410 258 21 0 chr15 63522775 63522872 -39972102 + B4 SINE B4 176 274 -18 4 1069 495 0 0 0 chr15 63522879 63522934 -39972040 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1069 980 250 41 8 chr15 63523061 63523303 -39971671 + Lx7 LINE L1 7140 7389 -307 4 1069 606 28 0 0 chr15 63523981 63524053 -39970921 + (TCC)n Simple_repeat Simple_repeat 2 73 0 4 1069 273 219 0 27 chr15 63524779 63524854 -39970120 + MIRc SINE MIR 69 141 -127 5 1069 313 153 14 14 chr15 63525585 63525658 -39969316 + (TG)n Simple_repeat Simple_repeat 1 73 0 5 1069 285 329 44 0 chr15 63526145 63526282 -39968692 - MER3 DNA MER1_type -63 146 4 5 1069 288 0 0 0 chr15 63526408 63526440 -39968534 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1069 486 0 0 0 chr15 63526440 63526493 -39968481 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 1069 378 214 106 70 chr15 63526530 63526679 -39968295 - B4A SINE B4 -43 249 98 5 1069 251 183 17 35 chr15 63526652 63526730 -39968244 - B3A SINE B2 -120 75 1 5 1069 216 157 137 0 chr15 63526873 63526924 -39968050 - B1_Mur2 SINE Alu -52 97 40 5 1069 636 200 0 0 chr15 63526960 63527140 -39967834 + CT-rich Low_complexity Low_complexity 1 180 0 5 1069 252 203 34 0 chr15 63527140 63527199 -39967775 + (CCTG)n Simple_repeat Simple_repeat 2 62 0 5 1069 2917 211 46 99 chr15 63527463 63528274 -39966700 + RMER1B Other Other 299 1066 0 6 1069 735 311 134 16 chr15 63528343 63528837 -39966137 + L1MD3 LINE L1 7319 7870 -125 6 1069 693 267 29 69 chr15 63529349 63529626 -39965348 + B4A SINE B4 26 291 -1 6 1069 500 81 14 0 chr15 63529635 63529709 -39965265 + (CA)n Simple_repeat Simple_repeat 1 75 0 6 1069 577 331 30 0 chr15 63529733 63529902 -39965072 + B3A SINE B2 1 174 -24 6 1069 713 294 53 14 chr15 63529906 63530113 -39964861 + B3 SINE B2 2 216 0 6 1069 1868 285 6 4 chr15 63530550 63531019 -39963955 + Lx7 LINE L1 6784 7253 -443 6 1069 1119 97 12 0 chr15 63531019 63531184 -39963790 - ORR1A3 LTR MaLR 0 326 160 6 1069 495 0 0 0 chr15 63531203 63531258 -39963716 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1069 243 0 0 0 chr15 63531315 63531342 -39963632 + (TGG)n Simple_repeat Simple_repeat 2 28 0 6 1069 1422 169 41 105 chr15 63531797 63532140 -39962834 + ORR1A4 LTR MaLR 1 321 -8 7 1069 208 0 62 0 chr15 63532208 63532240 -39962734 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 1069 599 256 94 42 chr15 63532999 63533211 -39961763 + ID_B1 SINE B4 1 223 -1 7 1069 295 267 56 41 chr15 63533391 63533586 -39961388 - Lx7 LINE L1 -18 7678 7481 7 1069 811 248 6 52 chr15 63533659 63533879 -39961095 + B3 SINE B2 2 212 -4 7 1069 498 352 28 0 chr15 63534973 63535189 -39959785 - MER58A DNA MER1_type 0 224 3 7 1069 239 157 0 19 chr15 63536567 63536619 -39958355 + CT-rich Low_complexity Low_complexity 2 52 0 7 1069 202 308 0 0 chr15 63536735 63536800 -39958174 + (TCCA)n Simple_repeat Simple_repeat 3 67 0 7 1069 229 196 0 0 chr15 63536736 63536782 -39958192 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 7 1069 1121 201 25 0 chr15 63537114 63537313 -39957661 + B3 SINE B2 1 204 -12 7 1069 299 305 126 30 chr15 63537375 63537645 -39957329 + L1M4 LINE L1 4004 4299 -1847 8 1069 26 0 0 0 chr15 63537656 63537682 -39957292 + AT_rich Low_complexity Low_complexity 1 26 0 8 1069 824 256 19 14 chr15 63537998 63538212 -39956762 + B3 SINE B2 1 215 -1 8 1069 454 305 155 46 chr15 63538250 63538625 -39956349 + L1M4 LINE L1 4625 5075 -1071 8 1069 1695 65 5 0 chr15 63538625 63538840 -39956134 - L1_Mus1 LINE L1 0 6567 6352 8 1069 649 300 104 25 chr15 63538840 63539334 -39955640 + L1M4 LINE L1 5076 5582 -582 8 1069 357 339 119 24 chr15 63540088 63540339 -39954635 - LTR33 LTR ERVL -240 275 1 8 1069 189 229 0 0 chr15 63540652 63540700 -39954274 + GA-rich Low_complexity Low_complexity 1 48 0 8 1069 321 356 17 8 chr15 63541300 63541419 -39953555 + PB1D7 SINE Alu 1 120 0 8 1069 1037 102 0 6 chr15 63541456 63541614 -39953360 + (GAAA)n Simple_repeat Simple_repeat 1 157 0 8 1069 608 153 0 8 chr15 63542225 63542344 -39952630 + CT-rich Low_complexity Low_complexity 2 119 0 8 1069 453 36 0 0 chr15 63542415 63542470 -39952504 + (TTA)n Simple_repeat Simple_repeat 2 56 0 8 1069 3178 75 49 20 chr15 63542471 63542920 -39952054 - L1_Mus3 LINE L1 -16 6622 6161 9 1069 4165 186 98 10 chr15 63543015 63544038 -39950936 + Lx9 LINE L1 6457 7644 0 9 1069 258 56 0 0 chr15 63544223 63544259 -39950715 + (TTTTG)n Simple_repeat Simple_repeat 3 38 0 9 1069 838 44 9 0 chr15 63544260 63544373 -39950601 - B1_Mus2 SINE Alu -1 146 33 9 1069 25 0 0 0 chr15 63544675 63544700 -39950274 + AT_rich Low_complexity Low_complexity 1 25 0 9 1069 906 102 0 52 chr15 63544716 63544871 -39950103 - L1Md_F2 LINE L1 0 6582 6436 9 1069 220 319 248 59 chr15 63545244 63545619 -39949355 - L2a LINE L2 -48 3378 2933 9 1069 1461 66 16 0 chr15 63546073 63546255 -39948719 + B2_Mm2 SINE B2 1 185 -10 9 1069 258 344 112 5 chr15 63546276 63546472 -39948502 - L2a LINE L2 -948 2471 2255 9 1069 433 69 0 0 chr15 63546494 63546552 -39948422 - L1Md_T LINE L1 -627 5955 5898 9 1069 5485 27 2 0 chr15 63546552 63547182 -39947792 + L1Md_T LINE L1 5950 6580 -2 9 1069 33 0 0 0 chr15 63547182 63547215 -39947759 + AT_rich Low_complexity Low_complexity 1 33 0 9 1069 186 43 0 0 chr15 63547215 63547238 -39947736 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1069 270 0 0 0 chr15 63547290 63547320 -39947654 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 1 1069 692 266 5 52 chr15 63547892 63548102 -39946872 - B3A SINE B2 -2 214 15 1 1069 1690 152 14 3 chr15 63548869 63549165 -39945809 - Lx LINE L1 -14 6640 6342 1 1069 417 20 0 0 chr15 63549882 63549932 -39945042 + (CCA)n Simple_repeat Simple_repeat 2 51 0 1 1069 262 232 0 18 chr15 63550037 63550094 -39944880 + CT-rich Low_complexity Low_complexity 2 57 0 1 1069 2408 173 50 13 chr15 63550192 63550685 -39944289 + L1_Mur3 LINE L1 5275 5768 -529 1 1069 674 175 0 0 chr15 63550692 63550806 -39944168 + Lx6 LINE L1 6639 6752 -708 1 1069 457 149 0 31 chr15 63550808 63550905 -39944069 + GA-rich Low_complexity Low_complexity 4 97 0 1 1069 3524 185 69 110 chr15 63550911 63551589 -39943385 + Lx7 LINE L1 6762 7397 -299 1 1069 423 0 0 0 chr15 63551589 63551636 -39943338 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1069 3524 185 69 110 chr15 63551636 63551932 -39943042 + Lx7 LINE L1 7398 7696 0 1 1069 27 0 0 0 chr15 63551945 63551972 -39943002 + AT_rich Low_complexity Low_complexity 1 27 0 1 1069 460 261 26 19 chr15 63552157 63552313 -39942661 + L1MB8 LINE L1 6010 6166 -12 1 1069 497 212 31 78 chr15 63552336 63552464 -39942510 - B1_Mur1 SINE Alu -1 148 27 1 1069 495 0 0 0 chr15 63553867 63553922 -39941052 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 1069 374 237 20 70 chr15 63553923 63554010 -39940964 + PB1D10 SINE Alu 22 103 -14 1 1069 504 32 0 0 chr15 63554010 63554072 -39940902 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 1069 374 237 20 70 chr15 63554072 63554084 -39940890 + PB1D10 SINE Alu 104 115 -2 1 1069 225 288 0 17 chr15 63554096 63554156 -39940818 + GA-rich Low_complexity Low_complexity 1 59 0 1 1069 30 27 0 0 chr15 63554353 63554390 -39940584 + AT_rich Low_complexity Low_complexity 1 37 0 1 1069 873 181 209 0 chr15 63555364 63555541 -39939433 - B3 SINE B2 0 216 3 1 1069 253 260 167 0 chr15 63555754 63555850 -39939124 + ID_B1 SINE B4 81 192 -32 1 1069 979 282 43 7 chr15 63555928 63556207 -39938767 - B4A SINE B4 0 292 4 1 1069 1217 262 93 8 chr15 63556350 63556746 -39938228 - L1MA4 LINE L1 -339 5961 5532 1 1069 5855 119 17 7 chr15 63556797 63557686 -39937288 - Lx2B LINE L1 0 7000 6103 1 1069 253 343 34 21 chr15 63557721 63557869 -39937105 + MIR SINE MIR 19 169 -99 1 1069 205 358 69 6 chr15 63558915 63559075 -39935899 - MIRb SINE MIR -72 196 27 1 1069 334 232 42 6 chr15 63559414 63559513 -39935461 + B4A SINE B4 2 111 -113 1 1069 273 340 9 9 chr15 63559531 63559641 -39935333 + B4 SINE B4 160 269 -23 1 1069 195 42 0 0 chr15 63559641 63559665 -39935309 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1069 242 323 52 0 chr15 63559690 63559786 -39935188 - Tigger7 DNA MER2_type -2370 121 21 1 1069 290 328 63 128 chr15 63560770 63560971 -39934003 + MLT1D LTR MaLR 6 190 -315 1 1069 1171 63 0 0 chr15 63560971 63561113 -39933861 + B1_Mus2 SINE Alu 1 142 -5 1 1069 290 280 135 56 chr15 63561113 63561350 -39933624 + MLT1D LTR MaLR 184 408 -59 1 1069 229 26 0 50 chr15 63561359 63561399 -39933575 + (GTTTG)n Simple_repeat Simple_repeat 2 39 0 1 1069 374 291 9 19 chr15 63562949 63563054 -39931920 + PB1D10 SINE Alu 4 107 -10 1 1069 717 237 5 40 chr15 63563054 63563256 -39931718 + B3A SINE B2 4 198 0 1 1069 488 156 14 0 chr15 63563259 63563400 -39931574 + (CAGAGA)n Simple_repeat Simple_repeat 4 146 0 1 1069 39 38 0 0 chr15 63563401 63563454 -39931520 + AT_rich Low_complexity Low_complexity 1 53 0 1 1069 276 278 10 30 chr15 63563622 63563722 -39931252 + A-rich Low_complexity Low_complexity 5 102 0 1 1069 232 317 98 18 chr15 63564184 63564348 -39930626 - MIR SINE MIR -9 253 77 1 1069 258 106 0 0 chr15 63564538 63564585 -39930389 + (G)n Simple_repeat Simple_repeat 1 47 0 1 1069 289 282 119 22 chr15 63564588 63564722 -39930252 + L1MA5 LINE L1 6150 6296 -4 1 1069 609 280 47 58 chr15 63564887 63565164 -39929810 + B4A SINE B4 1 274 -18 1 1069 783 83 0 0 chr15 63565242 63565350 -39929624 + (GGAA)n Simple_repeat Simple_repeat 1 108 0 1 1069 786 301 49 22 chr15 63567283 63567770 -39927204 + L1MA4 LINE L1 5615 6110 -1586 1 1069 381 58 0 0 chr15 63569281 63569333 -39925641 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1070 201 264 0 0 chr15 63570316 63570388 -39924586 + CT-rich Low_complexity Low_complexity 2 73 0 1 1070 248 302 0 16 chr15 63570452 63570516 -39924458 - PB1D10 SINE Alu -31 86 24 1 1070 234 283 40 71 chr15 63571343 63571442 -39923532 + PB1D7 SINE Alu 14 109 -11 1 1070 1167 29 0 0 chr15 63571442 63571581 -39923393 + (CA)n Simple_repeat Simple_repeat 2 140 0 1 1070 981 0 0 0 chr15 63571919 63572028 -39922946 + (GGGA)n Simple_repeat Simple_repeat 3 111 0 1 1070 261 0 0 0 chr15 63572185 63572214 -39922760 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1070 23 33 0 0 chr15 63572693 63572723 -39922251 + AT_rich Low_complexity Low_complexity 1 30 0 1 1070 4102 260 58 29 chr15 63572769 63573942 -39921032 - Lx8 LINE L1 -72 7401 6195 1 1070 3277 288 107 11 chr15 63574044 63574683 -39920291 - Lx8 LINE L1 -1662 5982 5242 1 1070 316 0 22 22 chr15 63574683 63574728 -39920246 + (TTTG)n Simple_repeat Simple_repeat 4 48 0 1 1070 3277 286 108 10 chr15 63574728 63575349 -39919625 - Lx8 LINE L1 -639 5241 4608 1 1070 185 0 40 0 chr15 63575349 63575374 -39919600 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1070 3277 286 108 10 chr15 63575374 63575691 -39919283 - Lx8 LINE L1 -1273 4607 4238 1 1070 184 345 101 10 chr15 63576701 63576900 -39918074 + MIR SINE MIR 35 251 -11 1 1070 541 327 92 31 chr15 63577124 63577484 -39917490 + MLT1D LTR MaLR 117 498 -7 1 1070 611 283 97 70 chr15 63578268 63578598 -39916376 + Lx8 LINE L1 7122 7460 -13 1 1070 241 256 48 60 chr15 63578613 63578696 -39916278 + B4 SINE B4 197 278 -14 1 1070 262 61 20 20 chr15 63579406 63579456 -39915518 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 1 1070 1192 273 7 27 chr15 63580070 63580367 -39914607 - B4 SINE B4 0 292 2 1 1070 23 0 0 0 chr15 63580576 63580599 -39914375 + AT_rich Low_complexity Low_complexity 1 23 0 1 1070 2214 38 4 0 chr15 63580643 63580908 -39914066 - L1Md_F2 LINE L1 0 6582 6317 1 1070 474 241 69 0 chr15 63581212 63581328 -39913646 + B1F SINE Alu 16 139 -10 1 1070 510 211 38 0 chr15 63582652 63582785 -39912189 - Lx6 LINE L1 -59 7401 7264 1 1070 23 0 0 0 chr15 63583159 63583182 -39911792 + GC_rich Low_complexity Low_complexity 1 23 0 1 1070 369 0 0 0 chr15 63583298 63583339 -39911635 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1070 1236 209 51 0 chr15 63583502 63583775 -39911199 - Lx9 LINE L1 -162 7482 7196 1 1070 824 242 31 26 chr15 63583751 63583946 -39911028 - Lx9 LINE L1 -339 7305 7110 1 1070 337 219 12 12 chr15 63583974 63584057 -39910917 + RMER30 DNA MER1_type 8 90 -112 1 1070 209 241 0 18 chr15 63584057 63584086 -39910888 + polypurine Low_complexity Low_complexity 1 28 0 1 1070 819 0 0 0 chr15 63584086 63584177 -39910797 + (GGAGA)n Simple_repeat Simple_repeat 1 91 0 1 1070 209 241 0 18 chr15 63584177 63584202 -39910772 + polypurine Low_complexity Low_complexity 29 53 0 1 1070 333 238 28 65 chr15 63584206 63584314 -39910660 + RMER30 DNA MER1_type 99 202 0 1 1070 252 0 0 0 chr15 63584316 63584344 -39910630 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 1070 360 0 0 0 chr15 63584344 63584383 -39910591 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 1070 377 325 7 26 chr15 63584438 63584593 -39910381 - MER45B DNA Tip100 -508 532 381 1 1070 801 0 0 0 chr15 63584675 63584764 -39910210 + (TCTCC)n Simple_repeat Simple_repeat 3 91 0 1 1070 300 319 178 0 chr15 63584767 63584902 -39910072 - MER45B DNA Tip100 -872 168 10 1 1070 290 205 94 24 chr15 63585716 63585801 -39909173 + MTEa LTR MaLR 288 378 -1 1 1070 251 300 70 43 chr15 63585912 63586027 -39908947 + MIR SINE MIR 59 176 -86 1 1070 546 254 0 0 chr15 63586487 63586597 -39908377 + RSINE1 SINE B4 3 112 -53 1 1070 387 0 0 0 chr15 63586601 63586644 -39908330 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1070 197 336 74 9 chr15 63586844 63586952 -39908022 + L2a LINE L2 3311 3425 -1 1 1070 300 313 50 89 chr15 63587722 63587901 -39907073 + MamSINE1 SINE tRNA 38 209 -81 1 1070 225 295 37 19 chr15 63589010 63589117 -39905857 + L3 LINE CR1 4369 4477 -12 1 1070 197 33 33 0 chr15 63590564 63590594 -39904380 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1 1070 909 153 0 0 chr15 63590750 63590907 -39904067 + (TG)n Simple_repeat Simple_repeat 2 158 0 1 1070 547 307 69 0 chr15 63590912 63591101 -39903873 + B3 SINE B2 6 207 -9 1 1070 1076 139 108 5 chr15 63591443 63591638 -39903336 + URR1A DNA MER1_type 12 226 0 1 1070 410 175 12 0 chr15 63592510 63592590 -39902384 + PB1D10 SINE Alu 31 111 -6 1 1070 429 314 41 0 chr15 63592597 63592718 -39902256 + RSINE1 SINE B4 2 127 -38 1 1070 308 286 7 76 chr15 63593619 63593763 -39901211 + L1MEf LINE L1 1832 1965 -4235 1 1070 380 301 90 77 chr15 63593819 63594053 -39900921 + L1MEc LINE L1 304 540 -5860 1 1070 8194 41 19 3 chr15 63594602 63594615 -39900359 - L1Md_F2 LINE L1 -1 6581 6570 1 1070 243 0 0 0 chr15 63594615 63594642 -39900332 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1070 8194 39 14 3 chr15 63594642 63596050 -39898924 - L1Md_F2 LINE L1 -13 6569 5146 1 1070 7892 85 1 1 chr15 63596033 63597105 -39897869 + L1_Mm LINE L1 2617 3688 -2195 1 1070 21 0 0 0 chr15 63597178 63597199 -39897775 + AT_rich Low_complexity Low_complexity 1 21 0 1 1070 889 300 75 55 chr15 63597269 63597854 -39897120 + L1MEc LINE L1 2288 2884 -3435 1 1070 192 219 0 0 chr15 63601004 63601045 -39893929 + L2b LINE L2 3329 3369 -6 1 1070 459 308 23 59 chr15 63601253 63601474 -39893500 + MLT1F1 LTR MaLR 343 555 -14 1 1070 244 246 35 0 chr15 63602568 63602625 -39892349 + ID4 SINE ID 2 60 -23 1 1070 254 155 0 33 chr15 63602645 63602705 -39892269 + GA-rich Low_complexity Low_complexity 3 60 0 1 1070 218 255 0 0 chr15 63603256 63603303 -39891671 + G-rich Low_complexity Low_complexity 2 48 0 1 1070 1497 198 65 9 chr15 63603650 63603986 -39890988 - MTD LTR MaLR -64 355 1 2 1070 3251 53 5 2 chr15 63604091 63604490 -39890484 - MTB LTR MaLR 0 400 1 2 1070 1761 156 67 90 chr15 63604672 63605059 -39889915 + ORR1C1 LTR MaLR 1 378 0 2 1070 285 342 102 20 chr15 63605161 63605358 -39889616 + MLT1C LTR MaLR 61 273 -194 2 1070 801 213 27 30 chr15 63605491 63605694 -39889280 + Lx9 LINE L1 5479 5713 -1760 2 1070 448 288 0 0 chr15 63605727 63605838 -39889136 + RMER1B Other Other 43 153 -913 2 1070 212 167 24 0 chr15 63605902 63605944 -39889030 + G-rich Low_complexity Low_complexity 3 45 0 2 1070 626 323 66 45 chr15 63606117 63606448 -39888526 + RMER1B Other Other 158 703 -639 2 1070 258 56 0 0 chr15 63606458 63606494 -39888480 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1070 801 230 70 15 chr15 63606799 63606998 -39887976 + RMER1C Other Other 1132 1341 -1 2 1070 407 184 13 0 chr15 63606996 63607072 -39887902 + Lx9 LINE L1 5657 5733 -114 2 1070 1087 249 19 53 chr15 63607096 63607474 -39887500 + Lx9 LINE L1 5743 6107 -1537 2 1070 334 285 105 7 chr15 63607727 63607879 -39887095 + Lx8 LINE L1 7055 7221 -252 2 1070 335 253 0 90 chr15 63609745 63609845 -39885129 - ID_B1 SINE B4 0 224 134 2 1070 278 313 0 39 chr15 63609762 63609865 -39885109 - B1F SINE Alu -11 138 40 2 1070 291 28 0 0 chr15 63611047 63611083 -39883891 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1070 419 314 33 0 chr15 63611844 63611997 -39882977 - RSINE1 SINE B4 -4 161 4 2 1070 317 247 67 0 chr15 63612130 63612219 -39882755 + B3 SINE B2 121 215 -1 2 1070 243 175 0 0 chr15 63612982 63613039 -39881935 + C-rich Low_complexity Low_complexity 3 59 0 2 1070 396 0 0 0 chr15 63613413 63613457 -39881517 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1070 34259 79 19 2 chr15 63613738 63619821 -39875153 - L1Md_F2 LINE L1 -10 6572 390 2 1070 4238 165 19 44 chr15 63620064 63620924 -39874050 + L1Md_A LINE L1 410 1247 -5477 2 1070 4817 66 0 0 chr15 63620936 63621541 -39873433 + L1Md_F2 LINE L1 4396 5000 -883 2 1070 33567 79 1 16 chr15 63621534 63626737 -39868237 + L1Md_F2 LINE L1 460 5586 -297 2 1070 8001 50 10 8 chr15 63626737 63627731 -39867243 + L1Md_F2 LINE L1 5587 6582 0 2 1070 4930 50 0 0 chr15 63627731 63628329 -39866645 + L1Md_F2 LINE L1 4989 5586 -297 2 1070 8173 50 1 3 chr15 63628329 63629327 -39865647 + L1Md_F2 LINE L1 5587 6582 0 2 1070 3718 24 0 0 chr15 63629327 63629752 -39865222 + L1Md_F2 LINE L1 5162 5586 -297 2 1070 8110 46 15 0 chr15 63629752 63630733 -39864241 + L1Md_F2 LINE L1 5587 6582 0 2 1070 555 29 0 0 chr15 63630742 63630811 -39864163 + (GAAA)n Simple_repeat Simple_repeat 1 69 0 2 1070 583 228 74 25 chr15 63631582 63631798 -39863176 - Lx7 LINE L1 -1736 5908 5686 2 1070 1224 304 77 30 chr15 63631800 63631849 -39863125 - L1_Mur3 LINE L1 -3410 2470 2423 2 1070 2084 134 0 57 chr15 63631849 63632198 -39862776 - ORR1A4 LTR MaLR 0 329 1 2 1070 1224 304 77 30 chr15 63632198 63632859 -39862115 - L1_Mur3 LINE L1 -3458 2422 1726 2 1070 596 274 15 0 chr15 63632915 63633050 -39861924 + ID_B1 SINE B4 82 218 -6 2 1070 332 231 0 13 chr15 63633731 63633810 -39861164 + B4 SINE B4 3 80 -212 2 1070 641 255 14 7 chr15 63633897 63634039 -39860935 + RSINE1 SINE B4 3 145 -20 2 1070 549 76 0 0 chr15 63634040 63634119 -39860855 + (CA)n Simple_repeat Simple_repeat 2 80 0 2 1070 2645 117 0 21 chr15 63634165 63634583 -39860391 - L1_Mus4 LINE L1 0 6636 6228 2 1070 378 107 0 0 chr15 63635725 63635781 -39859193 + B1_Mm SINE Alu 36 91 -56 2 1070 531 202 319 0 chr15 63636370 63636533 -39858441 + B3 SINE B2 1 215 -1 2 1070 415 306 32 0 chr15 63636537 63636694 -39858280 + L1MA4 LINE L1 5752 5913 -387 2 1070 713 283 166 27 chr15 63637031 63637285 -39857689 + L1MB1 LINE L1 5351 5641 -527 2 1070 1178 119 21 16 chr15 63637285 63637473 -39857501 + B2_Mm2 SINE B2 2 190 -5 2 1070 713 283 166 27 chr15 63637473 63637694 -39857280 + L1MB1 LINE L1 5642 5891 -277 2 1070 246 32 0 0 chr15 63637697 63637728 -39857246 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1070 332 206 20 49 chr15 63638151 63638253 -39856721 - MTEb LTR MaLR 0 379 281 2 1070 411 189 0 0 chr15 63638286 63638360 -39856614 - B3A SINE B2 -124 74 1 2 1070 770 281 21 9 chr15 63638474 63638707 -39856267 - B4A SINE B4 -10 282 47 2 1070 661 150 18 0 chr15 63638726 63638839 -39856135 + B1_Mus1 SINE Alu 22 136 -12 2 1070 273 275 53 84 chr15 63638733 63638864 -39856110 + B4 SINE B4 113 239 -53 2 1070 665 187 50 36 chr15 63639053 63639192 -39855782 + B1_Mur3 SINE Alu 2 142 -7 2 1070 180 111 0 0 chr15 63639193 63639220 -39855754 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 1070 238 257 68 0 chr15 63640504 63640578 -39854396 - MTEa LTR MaLR -17 362 284 2 1070 8258 80 3 3 chr15 63640728 63642573 -39852401 - L1_Mus1 LINE L1 0 6654 4759 2 1070 607 57 23 0 chr15 63642596 63642684 -39852290 + (TC)n Simple_repeat Simple_repeat 1 90 0 2 1070 234 0 0 0 chr15 63642684 63642709 -39852265 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1070 5356 160 104 56 chr15 63642876 63644079 -39850895 + RMER17A-int LTR ERVK 468 1728 0 2 1070 1083 107 0 18 chr15 63644080 63644251 -39850723 + RMER17A2 LTR ERVK 1 168 -738 2 1070 814 266 258 31 chr15 63644298 63644748 -39850226 + Lx9 LINE L1 7008 7559 -85 2 1070 28 0 0 0 chr15 63644828 63644856 -39850118 + AT_rich Low_complexity Low_complexity 1 28 0 2 1070 1046 236 172 6 chr15 63644913 63645267 -39849707 - MTD LTR MaLR -2 417 5 2 1070 702 279 6 43 chr15 63645345 63645561 -39849413 + B3A SINE B2 1 208 -8 2 1070 3173 149 66 28 chr15 63645677 63646256 -39848718 - MT2B LTR ERVL 0 601 1 2 1070 501 182 81 0 chr15 63646318 63646417 -39848557 + B1_Mur4 SINE Alu 23 129 -21 2 1070 1155 161 67 22 chr15 63646543 63646900 -39848074 + RMER10A LTR ERVL 32 441 -1 2 1070 5314 62 1 3 chr15 63647482 63648156 -39846818 + L1Md_F2 LINE L1 5910 6582 0 2 1070 538 235 9 0 chr15 63649151 63649266 -39845708 - RSINE1 SINE B4 -2 163 48 2 1070 231 161 0 0 chr15 63649459 63649515 -39845459 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 1070 259 159 154 31 chr15 63653245 63653310 -39841664 - ETnERV2-int LTR ERVK -7333 73 1 2 1070 2078 96 21 12 chr15 63653325 63653664 -39841310 - RLTR13D6 LTR ERVK -1 901 560 2 1070 560 320 65 66 chr15 63653984 63654190 -39840784 + RMER1B Other Other 158 248 -818 2 1070 3074 23 3 0 chr15 63654190 63654535 -39840439 - ORR1A0 LTR MaLR 0 346 1 2 1070 560 311 47 68 chr15 63654535 63654674 -39840300 + RMER1B Other Other 249 387 -679 2 1070 771 267 53 42 chr15 63654947 63655209 -39839765 + RMER1C Other Other 1077 1341 -1 2 1070 420 185 42 22 chr15 63655207 63655330 -39839644 + Lx9 LINE L1 5657 5851 -327 2 1070 1097 228 26 73 chr15 63655357 63655740 -39839234 + Lx9 LINE L1 5743 6107 -1537 2 1070 243 258 53 11 chr15 63655802 63655896 -39839078 - L1ME2z LINE L1 -169 6275 6178 2 1070 415 312 173 33 chr15 63655993 63656358 -39838616 + Lx8 LINE L1 7055 7470 -3 2 1070 230 324 68 0 chr15 63657882 63657956 -39837018 - ID4_ SINE ID -4 79 1 2 1070 316 242 0 90 chr15 63657964 63658064 -39836910 - ID_B1 SINE B4 0 224 134 2 1070 261 303 0 39 chr15 63657981 63658084 -39836890 - B1F SINE Alu -11 138 40 2 1070 435 19 0 0 chr15 63659266 63659318 -39835656 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1070 482 310 19 0 chr15 63660014 63660169 -39834805 - RSINE1 SINE B4 -4 161 4 2 1070 347 225 67 0 chr15 63660300 63660389 -39834585 + B3 SINE B2 121 215 -1 2 1070 189 94 0 0 chr15 63660653 63660685 -39834289 + (A)n Simple_repeat Simple_repeat 1 32 0 2 1070 492 32 0 0 chr15 63661620 63661682 -39833292 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 1070 519 254 29 17 chr15 63662992 63663192 -39831782 - Lx8 LINE L1 -1736 5908 5691 2 1070 871 282 106 68 chr15 63663210 63663259 -39831715 - L1_Mur3 LINE L1 -3410 2470 2423 2 1070 1916 144 6 63 chr15 63663259 63663608 -39831366 - ORR1A4 LTR MaLR 0 329 1 2 1070 871 282 106 68 chr15 63663608 63664276 -39830698 - L1_Mur3 LINE L1 -3458 2422 1726 2 1070 563 285 15 0 chr15 63664337 63664467 -39830507 + ID_B1 SINE B4 87 218 -6 2 1070 245 314 0 0 chr15 63665161 63665231 -39829743 + B4A SINE B4 3 72 -220 2 1070 257 241 62 12 chr15 63665237 63665317 -39829657 + L1MA8 LINE L1 6076 6159 -132 2 1070 816 241 6 0 chr15 63665328 63665490 -39829484 + RSINE1 SINE B4 3 165 0 2 1070 2626 99 15 25 chr15 63665556 63665960 -39829014 - L1_Mus3 LINE L1 -3 6635 6236 2 1070 245 241 37 0 chr15 63667073 63667127 -39827847 + MT2B LTR ERVL 185 240 -361 2 1070 411 109 0 44 chr15 63667079 63667164 -39827810 + B1_Mm SINE Alu 36 109 -38 2 1070 930 157 172 6 chr15 63667720 63667900 -39827074 + B3 SINE B2 1 210 -6 2 1070 551 268 18 6 chr15 63667907 63668072 -39826902 + L1MA4 LINE L1 5752 5918 -382 2 1070 237 131 49 0 chr15 63668075 63668136 -39826838 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 2 1070 222 289 0 0 chr15 63668407 63668459 -39826515 + ID4_ SINE ID 32 83 0 2 1070 279 296 181 32 chr15 63668462 63668707 -39826267 + L1M1 LINE L1 5362 5614 -686 2 1070 1186 113 37 21 chr15 63668707 63668897 -39826077 + B2_Mm2 SINE B2 3 195 0 2 1070 650 288 105 26 chr15 63668897 63669279 -39825695 + L1MB1 LINE L1 5658 6069 -99 2 1070 341 202 30 50 chr15 63669482 63669581 -39825393 - MTEb LTR MaLR -2 377 281 2 1070 453 162 0 0 chr15 63669614 63669688 -39825286 - B3A SINE B2 -124 74 1 2 1070 258 287 143 36 chr15 63669688 63669761 -39825213 + RMER12 LTR ERVK 770 854 -468 2 1070 739 313 13 0 chr15 63669801 63670031 -39824943 - B4A SINE B4 -10 282 50 2 1070 752 185 15 8 chr15 63670036 63670167 -39824807 + B1_Mus1 SINE Alu 5 136 -12 2 1070 261 294 62 85 chr15 63670053 63670183 -39824791 + B4A SINE B4 106 232 -60 2 1070 709 164 50 36 chr15 63670373 63670512 -39824462 + B1_Mur3 SINE Alu 2 142 -7 2 1070 180 103 0 0 chr15 63670512 63670522 -39824452 + (TA)n Simple_repeat Simple_repeat 1 10 0 2 1070 459 0 0 0 chr15 63670522 63670573 -39824401 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1070 180 103 0 0 chr15 63670573 63670591 -39824383 + (TA)n Simple_repeat Simple_repeat 1 18 0 2 1070 1104 59 0 0 chr15 63671736 63671889 -39823085 + (TC)n Simple_repeat Simple_repeat 2 154 0 3 1070 1405 60 21 16 chr15 63672246 63672432 -39822542 - B2_Mm2 SINE B2 -8 187 1 3 1070 321 26 0 0 chr15 63672437 63672475 -39822499 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 3 1070 372 337 86 11 chr15 63672503 63672689 -39822285 + L1M5 LINE L1 5525 5724 -400 3 1070 312 241 43 159 chr15 63672692 63672830 -39822144 + MT2B LTR ERVL 155 276 -325 3 1070 445 305 7 51 chr15 63672710 63672848 -39822126 + B1_Mur4 SINE Alu 10 141 -9 3 1070 248 111 22 0 chr15 63672855 63672900 -39822074 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1070 369 0 0 0 chr15 63673167 63673208 -39821766 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 1070 1075 75 0 0 chr15 63673691 63673825 -39821149 + B1_Mm SINE Alu 1 134 -13 3 1070 671 35 12 0 chr15 63673826 63673912 -39821062 + (GA)n Simple_repeat Simple_repeat 1 87 0 3 1070 2747 279 82 35 chr15 63674193 63674662 -39820312 + Lx9 LINE L1 6498 7009 -635 3 1070 1392 218 55 55 chr15 63674662 63675046 -39819928 + ORR1C2 LTR MaLR 1 384 0 3 1070 2747 279 82 35 chr15 63675046 63675666 -39819308 + Lx9 LINE L1 7010 7637 -7 3 1070 22 0 0 0 chr15 63675666 63675688 -39819286 + AT_rich Low_complexity Low_complexity 1 22 0 3 1070 850 270 188 11 chr15 63675745 63676097 -39818877 - MTC LTR MaLR -2 419 6 3 1070 730 260 5 62 chr15 63676148 63676357 -39818617 + B3A SINE B2 1 197 -1 3 1070 3223 146 65 29 chr15 63676495 63677075 -39817899 - MT2B LTR ERVL 0 601 1 3 1070 507 202 81 0 chr15 63677137 63677236 -39817738 + B1_Mur4 SINE Alu 23 129 -21 3 1070 1434 169 182 6 chr15 63677359 63677710 -39817264 + RMER10A LTR ERVL 29 441 -1 3 1070 22 0 0 0 chr15 63679205 63679227 -39815747 + AT_rich Low_complexity Low_complexity 1 22 0 3 1070 541 237 18 0 chr15 63680765 63680879 -39814095 - RSINE1 SINE B4 -2 163 48 3 1070 459 0 0 0 chr15 63680902 63680953 -39814021 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1070 266 284 41 82 chr15 63680967 63681113 -39813861 - MIRc SINE MIR -70 198 53 3 1070 245 291 141 7 chr15 63681552 63681687 -39813287 - MER102c DNA MER1_type 0 331 179 3 1070 332 264 147 16 chr15 63682360 63682473 -39812501 - PB1 SINE Alu -2 125 6 3 1070 329 342 119 12 chr15 63682777 63682937 -39812037 - MIRb SINE MIR -42 226 50 3 1070 1552 235 152 37 chr15 63683126 63683613 -39811361 - RLTR33 LTR ERVK 0 678 136 3 1070 252 272 75 11 chr15 63683648 63683741 -39811233 - MER81 DNA AcHobo 0 114 16 3 1070 362 356 70 46 chr15 63683757 63683998 -39810976 - MLT1J LTR MaLR -26 486 240 3 1070 247 330 143 0 chr15 63684010 63684101 -39810873 - MLT1J LTR MaLR -340 172 69 3 1070 5644 45 3 1 chr15 63684357 63685042 -39809932 - L1Md_F2 LINE L1 -1 6581 5896 3 1070 295 168 132 3 chr15 63687006 63687082 -39807892 - ETnERV2-int LTR ERVK -7333 73 1 3 1070 2222 104 21 9 chr15 63687085 63687424 -39807550 - RLTR13D6 LTR ERVK 0 902 560 3 1070 613 321 74 46 chr15 63687742 63688131 -39806843 + RMER1B Other Other 158 681 -661 3 1070 825 234 65 15 chr15 63688405 63688605 -39806369 + RMER1C Other Other 1132 1341 -1 3 1070 405 176 48 28 chr15 63688603 63688726 -39806248 + Lx9 LINE L1 5657 5851 -327 3 1070 1071 238 21 68 chr15 63688728 63689111 -39805863 + Lx9 LINE L1 5743 6107 -1537 3 1070 235 253 63 0 chr15 63689173 63689252 -39805722 - L1ME2z LINE L1 -169 6275 6192 3 1070 376 311 170 30 chr15 63689364 63689729 -39805245 + Lx8 LINE L1 7055 7470 -3 3 1070 233 324 68 0 chr15 63691309 63691383 -39803591 - ID4_ SINE ID -4 79 1 3 1070 314 264 0 90 chr15 63691391 63691491 -39803483 - ID_B1 SINE B4 0 224 134 3 1070 266 309 0 52 chr15 63691395 63691511 -39803463 - B1F SINE Alu 0 149 40 3 1070 252 100 0 0 chr15 63692698 63692738 -39802236 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1070 438 314 33 0 chr15 63693424 63693577 -39801397 - RSINE1 SINE B4 -4 161 4 3 1070 380 245 54 45 chr15 63693687 63693798 -39801176 + B3 SINE B2 104 215 -1 3 1070 231 254 15 0 chr15 63694526 63694593 -39800381 + C-rich Low_complexity Low_complexity 4 71 0 3 1070 528 30 0 0 chr15 63694949 63695015 -39799959 + (TG)n Simple_repeat Simple_repeat 2 67 0 3 1070 230 338 15 0 chr15 63696009 63696077 -39798897 - ID4_ SINE ID -13 70 2 3 1070 551 256 25 6 chr15 63696324 63696524 -39798450 - Lx8 LINE L1 -1736 5908 5691 3 1070 1146 307 60 46 chr15 63696542 63696591 -39798383 - L1_Mur3 LINE L1 -3410 2470 2423 3 1070 1892 147 6 63 chr15 63696591 63696940 -39798034 - ORR1A4 LTR MaLR 0 329 1 3 1070 1146 307 60 46 chr15 63696940 63697625 -39797349 - L1_Mur3 LINE L1 -3458 2422 1726 3 1070 621 277 15 0 chr15 63697686 63697816 -39797158 + ID_B1 SINE B4 87 218 -6 3 1070 192 312 0 13 chr15 63698029 63698107 -39796867 - L4 LINE RTE -87 1942 1866 3 1070 295 321 8 43 chr15 63698510 63698627 -39796347 + B4 SINE B4 3 115 -177 3 1070 813 247 6 0 chr15 63698677 63698839 -39796135 + RSINE1 SINE B4 3 165 0 3 1070 2717 97 14 31 chr15 63698898 63699313 -39795661 - L1_Mus3 LINE L1 -3 6635 6228 3 1070 245 241 37 0 chr15 63700426 63700480 -39794494 + MT2B LTR ERVL 185 240 -361 3 1070 411 109 0 44 chr15 63700432 63700517 -39794457 + B1_Mm SINE Alu 36 109 -38 3 1071 904 162 172 6 chr15 63701074 63701254 -39793720 + B3 SINE B2 1 210 -6 3 1071 551 268 18 6 chr15 63701261 63701426 -39793548 + L1MA4 LINE L1 5752 5918 -382 3 1071 721 65 19 0 chr15 63701447 63701555 -39793419 + (TA)n Simple_repeat Simple_repeat 1 110 0 3 1071 222 289 0 0 chr15 63701811 63701863 -39793111 + ID4_ SINE ID 32 83 0 3 1071 299 293 181 32 chr15 63701866 63702111 -39792863 + L1M1 LINE L1 5362 5614 -686 3 1071 1210 108 37 21 chr15 63702111 63702301 -39792673 + B2_Mm2 SINE B2 3 195 0 3 1071 697 282 105 26 chr15 63702301 63702683 -39792291 + L1MB1 LINE L1 5658 6069 -99 3 1071 341 202 30 50 chr15 63702886 63702985 -39791989 - MTEb LTR MaLR -2 377 281 3 1071 453 162 0 0 chr15 63703018 63703092 -39791882 - B3A SINE B2 -124 74 1 3 1071 258 287 143 36 chr15 63703092 63703165 -39791809 + RMER12 LTR ERVK 770 854 -468 3 1071 739 313 13 0 chr15 63703205 63703435 -39791539 - B4A SINE B4 -10 282 50 3 1071 752 185 15 8 chr15 63703440 63703571 -39791403 + B1_Mus1 SINE Alu 5 136 -12 3 1071 261 294 62 85 chr15 63703457 63703587 -39791387 + B4A SINE B4 106 232 -60 3 1071 709 164 50 36 chr15 63703777 63703916 -39791058 + B1_Mur3 SINE Alu 2 142 -7 3 1071 216 91 0 0 chr15 63703916 63703930 -39791044 + (TA)n Simple_repeat Simple_repeat 1 14 0 3 1071 297 0 0 0 chr15 63703930 63703963 -39791011 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1071 216 91 0 0 chr15 63703963 63703981 -39790993 + (TA)n Simple_repeat Simple_repeat 1 18 0 3 1071 1026 74 0 0 chr15 63705126 63705275 -39789699 + (TC)n Simple_repeat Simple_repeat 2 150 0 3 1071 1405 60 21 16 chr15 63705632 63705818 -39789156 - B2_Mm2 SINE B2 -8 187 1 3 1071 285 29 0 0 chr15 63705823 63705857 -39789117 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 3 1071 372 337 86 11 chr15 63705885 63706071 -39788903 + L1M5 LINE L1 5525 5724 -400 3 1071 312 241 43 159 chr15 63706074 63706212 -39788762 + MT2B LTR ERVL 155 276 -325 3 1071 445 305 7 51 chr15 63706092 63706230 -39788744 + B1_Mur4 SINE Alu 10 141 -9 3 1071 248 111 22 0 chr15 63706237 63706282 -39788692 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1071 459 0 0 0 chr15 63706549 63706600 -39788374 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 1071 1131 78 0 0 chr15 63707083 63707224 -39787750 + B1_Mm SINE Alu 1 141 -6 3 1071 236 168 42 101 chr15 63707224 63707343 -39787631 - RMER17C LTR ERVK -250 160 49 3 1071 2698 284 81 34 chr15 63707575 63708044 -39786930 + Lx9 LINE L1 6498 7009 -635 3 1071 1408 215 55 55 chr15 63708044 63708428 -39786546 + ORR1C2 LTR MaLR 1 384 0 3 1071 2698 284 81 34 chr15 63708428 63709048 -39785926 + Lx9 LINE L1 7010 7637 -7 3 1071 22 0 0 0 chr15 63709048 63709070 -39785904 + AT_rich Low_complexity Low_complexity 1 22 0 3 1071 850 270 188 11 chr15 63709127 63709479 -39785495 - MTC LTR MaLR -2 419 6 3 1071 730 260 5 62 chr15 63709530 63709739 -39785235 + B3A SINE B2 1 197 -1 3 1071 3212 146 65 29 chr15 63709877 63710457 -39784517 - MT2B LTR ERVL 0 601 1 3 1071 519 192 81 0 chr15 63710519 63710618 -39784356 + B1_Mur4 SINE Alu 23 129 -21 3 1071 1434 169 182 6 chr15 63710741 63711092 -39783882 + RMER10A LTR ERVL 29 441 -1 3 1071 480 281 18 0 chr15 63714153 63714267 -39780707 - RSINE1 SINE B4 -2 163 48 3 1071 555 62 0 0 chr15 63714485 63714565 -39780409 + (CA)n Simple_repeat Simple_repeat 1 80 0 3 1071 203 318 51 43 chr15 63714572 63714710 -39780264 - MIRc SINE MIR -64 204 66 3 1071 257 313 74 83 chr15 63715975 63716083 -39778891 - PB1D10 SINE Alu -8 112 6 3 1071 329 342 119 12 chr15 63716387 63716547 -39778427 - MIRb SINE MIR -42 226 50 3 1071 1574 232 152 37 chr15 63716736 63717223 -39777751 - RLTR33 LTR ERVK 0 678 136 3 1071 272 261 75 11 chr15 63717258 63717351 -39777623 - MER81 DNA AcHobo 0 114 16 3 1071 362 356 70 46 chr15 63717367 63717608 -39777366 - MLT1J LTR MaLR -26 486 240 3 1071 247 330 143 0 chr15 63717620 63717711 -39777263 - MLT1J LTR MaLR -340 172 69 3 1071 5644 45 3 1 chr15 63717967 63718652 -39776322 - L1Md_F2 LINE L1 -1 6581 5896 3 1071 189 253 167 39 chr15 63718941 63719019 -39775955 - L2 LINE L2 -2851 568 481 3 1071 228 232 71 35 chr15 63719891 63719976 -39774998 + MURVY-LTR LTR ERV1 351 438 -81 3 1071 295 168 132 3 chr15 63720616 63720692 -39774282 - ETnERV2-int LTR ERVK -7333 73 1 4 1071 2232 98 24 9 chr15 63720695 63721033 -39773941 - RLTR13D6 LTR ERVK 0 902 560 4 1071 243 325 0 0 chr15 63721042 63721122 -39773852 + RMER1B Other Other 74 153 -913 4 1071 660 309 60 46 chr15 63721349 63721679 -39773295 + RMER1B Other Other 158 681 -661 4 1071 809 234 65 15 chr15 63722013 63722213 -39772761 + RMER1C Other Other 1132 1341 -1 4 1071 1184 226 14 25 chr15 63722211 63722497 -39772477 + Lx9 LINE L1 5692 5974 -1670 4 1071 244 257 173 40 chr15 63722723 63722873 -39772101 - L1ME2z LINE L1 -182 6262 6093 4 1071 373 296 172 43 chr15 63722856 63723114 -39771860 + Lx8 LINE L1 7028 7319 -154 4 1071 230 324 68 0 chr15 63724835 63724909 -39770065 - ID4_ SINE ID -4 79 1 4 1071 321 253 0 90 chr15 63724917 63725017 -39769957 - ID_B1 SINE B4 0 224 134 4 1071 276 263 39 78 chr15 63724934 63725037 -39769937 - B1F SINE Alu -11 138 40 4 1071 219 88 0 0 chr15 63726193 63726227 -39768747 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1071 415 329 19 0 chr15 63727012 63727167 -39767807 - RSINE1 SINE B4 -4 161 4 4 1071 289 236 71 43 chr15 63727247 63727390 -39767584 + B3 SINE B2 28 215 -1 4 1071 196 53 0 50 chr15 63727654 63727694 -39767280 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 4 1071 243 175 0 0 chr15 63728167 63728224 -39766750 + C-rich Low_complexity Low_complexity 3 59 0 4 1071 402 21 0 0 chr15 63728595 63728642 -39766332 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1071 553 256 25 6 chr15 63729947 63730147 -39764827 - Lx8 LINE L1 -1736 5908 5691 4 1071 1132 308 60 46 chr15 63730165 63730214 -39764760 - L1_Mur3 LINE L1 -3410 2470 2423 4 1071 1866 143 23 64 chr15 63730214 63730557 -39764417 - ORR1A4 LTR MaLR 0 329 1 4 1071 1132 308 60 46 chr15 63730557 63731242 -39763732 - L1_Mur3 LINE L1 -3458 2422 1726 4 1071 559 285 15 0 chr15 63731303 63731433 -39763541 + ID_B1 SINE B4 87 218 -6 4 1071 245 314 0 0 chr15 63732127 63732197 -39762777 + B4A SINE B4 3 72 -220 4 1071 257 241 62 12 chr15 63732203 63732283 -39762691 + L1MA8 LINE L1 6076 6159 -132 4 1071 676 246 7 0 chr15 63732294 63732436 -39762538 + RSINE1 SINE B4 3 145 -20 4 1071 183 129 0 0 chr15 63732437 63732468 -39762506 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1071 2531 107 14 61 chr15 63732517 63732945 -39762029 - L1_Mus3 LINE L1 -3 6635 6228 4 1071 393 71 0 0 chr15 63734065 63734121 -39760853 + B1_Mm SINE Alu 36 91 -56 4 1071 571 178 323 6 chr15 63734708 63734866 -39760108 + B3 SINE B2 3 210 -6 4 1071 559 268 18 6 chr15 63734873 63735038 -39759936 + L1MA4 LINE L1 5752 5918 -382 4 1071 250 138 35 0 chr15 63735059 63735117 -39759857 + (TA)n Simple_repeat Simple_repeat 1 60 0 4 1071 346 293 75 61 chr15 63735386 63735666 -39759308 + L1MB1 LINE L1 5329 5612 -577 4 1071 1235 105 15 26 chr15 63735669 63735864 -39759110 + B2_Mm2 SINE B2 3 195 0 4 1071 623 267 122 38 chr15 63735864 63736247 -39758727 + L1MB1 LINE L1 5658 6069 -120 4 1071 309 227 20 49 chr15 63736453 63736555 -39758419 - MTEb LTR MaLR 0 379 281 4 1071 441 149 0 0 chr15 63736588 63736662 -39758312 - B3A SINE B2 -124 74 1 4 1071 210 195 0 24 chr15 63736679 63736721 -39758253 + (TATG)n Simple_repeat Simple_repeat 3 43 0 4 1071 677 309 13 0 chr15 63736771 63737001 -39757973 - B4A SINE B4 -10 282 50 4 1071 693 158 9 0 chr15 63737023 63737137 -39757837 + B1_Mus1 SINE Alu 22 136 -12 4 1071 728 157 50 36 chr15 63737343 63737482 -39757492 + B1_Mur3 SINE Alu 2 142 -7 4 1071 549 0 0 0 chr15 63737488 63737549 -39757425 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1071 1221 60 0 0 chr15 63738712 63738879 -39756095 + (TC)n Simple_repeat Simple_repeat 2 168 0 4 1071 274 225 70 0 chr15 63738984 63739055 -39755919 - MTEa LTR MaLR -21 358 283 4 1071 1422 55 21 16 chr15 63739237 63739423 -39755551 - B2_Mm2 SINE B2 -8 187 1 4 1071 252 0 0 0 chr15 63739427 63739455 -39755519 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 1071 304 326 86 11 chr15 63739486 63739672 -39755302 + L1M5 LINE L1 5525 5724 -400 4 1071 266 241 43 159 chr15 63739675 63739813 -39755161 + MT2B LTR ERVL 155 276 -325 4 1071 393 292 8 55 chr15 63739693 63739820 -39755154 + B1_Mur4 SINE Alu 10 130 -20 4 1071 577 76 22 0 chr15 63739838 63739930 -39755044 + (CA)n Simple_repeat Simple_repeat 1 94 0 4 1071 504 0 0 0 chr15 63740200 63740256 -39754718 + (GA)n Simple_repeat Simple_repeat 2 57 0 4 1071 1081 86 0 0 chr15 63740740 63740880 -39754094 + B1_Mm SINE Alu 1 140 -7 4 1071 1137 15 0 0 chr15 63740881 63741012 -39753962 + (GA)n Simple_repeat Simple_repeat 1 131 0 4 1071 2636 289 79 32 chr15 63741293 63741762 -39753212 + Lx9 LINE L1 6498 7009 -635 4 1071 1421 212 55 55 chr15 63741762 63742146 -39752828 + ORR1C2 LTR MaLR 1 384 0 4 1071 2636 289 79 32 chr15 63742146 63742766 -39752208 + Lx9 LINE L1 7010 7637 -7 4 1071 22 0 0 0 chr15 63742766 63742788 -39752186 + AT_rich Low_complexity Low_complexity 1 22 0 4 1071 1132 219 172 6 chr15 63742837 63743191 -39751783 - MTD LTR MaLR -2 417 5 4 1071 710 276 5 42 chr15 63743269 63743458 -39751516 + B3A SINE B2 1 182 -16 4 1071 3140 145 75 30 chr15 63743616 63744191 -39750783 - MT2B LTR ERVL 0 601 1 4 1071 490 192 81 0 chr15 63744253 63744352 -39750622 + B1_Mur4 SINE Alu 23 129 -21 4 1071 1298 175 182 6 chr15 63744475 63744826 -39750148 + RMER10A LTR ERVL 29 441 -1 4 1071 501 246 0 33 chr15 63747874 63747996 -39746978 - RSINE1 SINE B4 0 165 48 4 1071 525 55 0 0 chr15 63748195 63748268 -39746706 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 1071 219 329 58 12 chr15 63749670 63749756 -39745218 - PB1D10 SINE Alu -8 109 20 4 1071 237 354 119 12 chr15 63750082 63750242 -39744732 - MIRb SINE MIR -42 226 50 4 1071 1342 234 143 33 chr15 63750431 63750886 -39744088 - RLTR33 LTR ERVK 0 678 174 4 1071 240 261 75 11 chr15 63750953 63751046 -39743928 - MER81 DNA AcHobo 0 114 16 4 1071 274 346 80 27 chr15 63751062 63751249 -39743725 - MLT1J LTR MaLR -26 486 290 4 1071 5699 45 1 4 chr15 63751656 63752342 -39742632 - L1Md_F2 LINE L1 -3 6579 5896 4 1071 684 195 140 28 chr15 63758393 63758572 -39736402 + B3 SINE B2 9 207 -9 4 1071 324 215 11 92 chr15 63759040 63759127 -39735847 + ID2 SINE ID 1 80 -3 4 1071 270 354 52 17 chr15 63759189 63759304 -39735670 + B3 SINE B2 70 188 -28 4 1071 186 133 0 0 chr15 63759427 63759457 -39735517 + L2c LINE L2 3267 3296 -91 4 1071 847 256 78 57 chr15 63760515 63760847 -39734127 - MER58B DNA MER1_type -1 340 2 4 1071 525 291 64 0 chr15 63761159 63761331 -39733643 - MLT1C LTR MaLR 0 467 285 4 1071 248 315 76 16 chr15 63761356 63761540 -39733434 - MLT1C LTR MaLR -268 237 43 4 1071 790 169 223 5 chr15 63764450 63764634 -39730340 - URR1B DNA MER1_type -1 224 1 4 1071 2958 45 0 6 chr15 63767236 63767597 -39727377 - L1Md_T LINE L1 0 6582 6224 4 1071 234 0 0 0 chr15 63769064 63769090 -39725884 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1071 1123 76 14 0 chr15 63769090 63769235 -39725739 - B1_Mm SINE Alu 0 147 1 4 1071 336 298 36 0 chr15 63770656 63770740 -39724234 - RSINE1 SINE B4 -45 120 34 4 1071 366 186 7 35 chr15 63771661 63771806 -39723168 + (TA)n Simple_repeat Simple_repeat 1 141 0 4 1071 1645 45 0 0 chr15 63772073 63772275 -39722699 + L1Md_T LINE L1 6381 6582 0 4 1071 212 100 25 0 chr15 63772548 63772588 -39722386 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 4 1071 495 226 17 17 chr15 63773244 63773361 -39721613 + B1_Mur2 SINE Alu 23 139 -10 4 1071 207 0 0 0 chr15 63773361 63773384 -39721590 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1071 299 260 0 38 chr15 63773766 63773846 -39721128 - B1_Mur3 SINE Alu -71 78 2 4 1071 258 234 0 0 chr15 63774199 63774246 -39720728 + B1_Mur4 SINE Alu 2 48 -102 4 1071 250 250 70 26 chr15 63775319 63775434 -39719540 + B4A SINE B4 173 292 0 4 1071 21 36 0 0 chr15 63775461 63775489 -39719485 + AT_rich Low_complexity Low_complexity 1 28 0 4 1071 245 228 18 0 chr15 63775536 63775593 -39719381 + ID2 SINE ID 9 66 -17 4 1071 479 266 9 9 chr15 63777010 63777120 -39717854 - PB1D10 SINE Alu -7 110 1 4 1071 527 77 371 9 chr15 63777773 63777878 -39717096 + B1_Mus1 SINE Alu 1 143 -5 4 1071 195 42 0 0 chr15 63777883 63777907 -39717067 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1071 1026 174 34 53 chr15 63778037 63778244 -39716730 - B3 SINE B2 -11 205 3 4 1071 638 164 9 26 chr15 63778960 63779073 -39715901 - PB1D7 SINE Alu -1 119 9 4 1071 352 297 20 15 chr15 63778979 63779098 -39715876 - B4A SINE B4 -101 191 71 4 1071 1829 84 208 43 chr15 63779692 63779949 -39715025 - Lx3_Mus LINE L1 -699 6310 6017 4 1071 369 0 0 0 chr15 63779949 63779990 -39714984 + (TC)n Simple_repeat Simple_repeat 2 42 0 4 1071 1829 84 208 43 chr15 63779990 63780103 -39714871 - Lx3_Mus LINE L1 -993 6016 5881 4 1071 515 227 59 0 chr15 63781973 63782092 -39712882 - B1F SINE Alu 0 149 24 4 1071 260 206 14 113 chr15 63782032 63782103 -39712871 - MT2B2 LTR ERVL -340 244 181 4 1071 21 36 0 0 chr15 63783316 63783344 -39711630 + AT_rich Low_complexity Low_complexity 1 28 0 4 1071 26 0 0 0 chr15 63783520 63783546 -39711428 + AT_rich Low_complexity Low_complexity 1 26 0 4 1071 21 0 0 0 chr15 63785616 63785637 -39709337 + AT_rich Low_complexity Low_complexity 1 21 0 4 1071 23 54 0 0 chr15 63786078 63786115 -39708859 + AT_rich Low_complexity Low_complexity 1 37 0 4 1071 784 148 165 12 chr15 63786284 63786448 -39708526 + B3 SINE B2 4 192 -24 4 1071 222 91 0 0 chr15 63787115 63787148 -39707826 + (TATG)n Simple_repeat Simple_repeat 4 36 0 4 1071 834 261 86 30 chr15 63790536 63790804 -39704170 - B4A SINE B4 -8 284 2 5 1071 1181 54 7 0 chr15 63790982 63791129 -39703845 + B1_Mus1 SINE Alu 1 148 0 5 1071 264 30 0 0 chr15 63791131 63791164 -39703810 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 5 1071 309 250 29 29 chr15 63791174 63791244 -39703730 - B1_Mur1 SINE Alu -6 143 74 5 1071 1607 244 49 3 chr15 63791375 63791720 -39703254 + ORR1D2 LTR MaLR 2 362 -8 5 1071 309 295 108 49 chr15 63792100 63792303 -39702671 - MER20 DNA MER1_type -4 215 1 5 1071 651 155 145 62 chr15 63793248 63793427 -39701547 - B2_Mm2 SINE B2 -1 194 1 5 1071 345 338 69 51 chr15 63793450 63793784 -39701190 + L2 LINE L2 1712 2051 -1368 5 1071 216 0 0 0 chr15 63793879 63793903 -39701071 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 1071 4894 34 0 7 chr15 63794517 63795105 -39699869 + L1Md_F2 LINE L1 5999 6582 0 5 1071 459 0 0 0 chr15 63795149 63795200 -39699774 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 5 1071 537 139 12 0 chr15 63795246 63795332 -39699642 - B2_Mm2 SINE B2 -107 88 2 5 1071 247 316 4 66 chr15 63796626 63796714 -39698260 - BC1_Mm scRNA scRNA -65 87 5 5 1071 275 289 66 11 chr15 63796717 63796808 -39698166 - PB1D10 SINE Alu 0 117 22 5 1071 194 0 0 37 chr15 63796942 63796969 -39698005 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 1071 665 285 167 41 chr15 63797261 63797322 -39697652 + B4 SINE B4 2 66 -226 5 1071 1395 150 192 13 chr15 63797322 63797639 -39697335 + ORR1C1 LTR MaLR 1 374 -4 5 1071 665 285 167 41 chr15 63797639 63797822 -39697152 + B4 SINE B4 67 277 -15 5 1071 286 246 36 18 chr15 63798145 63798262 -39696712 - PB1D10 SINE Alu -11 138 17 5 1071 1870 118 15 24 chr15 63799328 63799629 -39695345 + ORR1A4 LTR MaLR 63 348 -11 5 1071 252 189 19 19 chr15 63799805 63799859 -39695115 - B1F SINE Alu 0 149 96 5 1071 309 319 28 28 chr15 63800936 63801078 -39693896 + Charlie4a DNA MER1_type 81 222 -286 5 1071 1124 144 114 0 chr15 63801078 63801279 -39693695 - URR1B DNA MER1_type -1 224 1 5 1071 65 56 0 0 chr15 63801582 63801689 -39693285 + AT_rich Low_complexity Low_complexity 1 107 0 5 1071 409 387 20 0 chr15 63801886 63802036 -39692938 - RSINE1 SINE B4 -2 163 11 5 1071 344 361 70 19 chr15 63802597 63802755 -39692219 + B4A SINE B4 42 207 -85 5 1071 387 0 0 0 chr15 63802772 63802815 -39692159 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 1071 3552 48 0 0 chr15 63804258 63804694 -39690280 - L1Md_F2 LINE L1 -12 6570 6135 5 1071 529 321 118 30 chr15 63804838 63805108 -39689866 + LTR16E2 LTR ERVL 267 560 -8 5 1071 245 304 248 14 chr15 63805127 63805490 -39689484 + L2 LINE L2 2154 2601 -818 5 1071 823 87 14 0 chr15 63805578 63805700 -39689274 + B1_Mus1 SINE Alu 27 148 0 5 1071 224 29 86 0 chr15 63805704 63805739 -39689235 + (GGGGA)n Simple_repeat Simple_repeat 5 42 0 5 1071 1529 185 132 38 chr15 63806640 63806982 -39687992 + ORR1D1 LTR MaLR 1 374 0 5 1071 291 109 0 0 chr15 63807009 63807027 -39687947 + (A)n Simple_repeat Simple_repeat 1 18 0 5 1071 1077 70 35 0 chr15 63807027 63807169 -39687805 + B1_Mus2 SINE Alu 1 147 0 5 1071 291 109 0 0 chr15 63807169 63807196 -39687778 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1071 4510 141 35 1 chr15 63807231 63807972 -39687002 + Lx LINE L1 5877 6642 -12 5 1071 594 271 33 7 chr15 63808215 63808367 -39686607 + B3A SINE B2 5 160 -38 5 1071 309 26 0 0 chr15 63808480 63808518 -39686456 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1071 676 299 108 42 chr15 63808992 63809278 -39685696 + MER2 DNA MER2_type 15 319 -26 5 1071 28 61 0 0 chr15 63809290 63809339 -39685635 + AT_rich Low_complexity Low_complexity 1 49 0 5 1071 492 248 19 58 chr15 63809358 63809512 -39685462 + B1F1 SINE Alu 2 149 0 5 1071 277 225 0 59 chr15 63809518 63809603 -39685371 + L1_Rod LINE L1 5142 5221 -626 5 1071 2218 184 27 2 chr15 63809692 63810095 -39684879 - MTC LTR MaLR -8 413 1 5 1071 297 272 115 42 chr15 63810179 63810275 -39684699 - B4A SINE B4 -135 157 55 5 1071 1701 155 74 25 chr15 63810973 63811298 -39683676 + Lx5 LINE L1 6707 7047 -3 5 1071 963 110 20 14 chr15 63811963 63812111 -39682863 - B1_Mur4 SINE Alu 0 150 2 5 1071 499 333 132 64 chr15 63812114 63812660 -39682314 + L1M5 LINE L1 4585 5167 -979 5 1071 588 258 80 25 chr15 63813042 63813205 -39681769 + B3A SINE B2 11 182 -16 5 1071 451 323 59 20 chr15 63813338 63813540 -39681434 + ORR1E LTR MaLR 138 347 -12 5 1071 1248 196 0 0 chr15 63813849 63814074 -39680900 + URR1B DNA MER1_type 1 225 0 5 1071 668 267 144 37 chr15 63814404 63814703 -39680271 - ORR1E LTR MaLR -28 331 1 5 1071 231 319 0 0 chr15 63815193 63815262 -39679712 - ID4 SINE ID -1 82 14 5 1071 225 0 0 0 chr15 63815549 63815574 -39679400 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1071 1556 170 38 142 chr15 63815654 63816071 -39678903 + ORR1C1 LTR MaLR 5 378 0 5 1071 24 32 0 0 chr15 63816473 63816504 -39678470 + AT_rich Low_complexity Low_complexity 1 31 0 5 1071 235 331 79 63 chr15 63816893 63817083 -39677891 - L2c LINE L2 -80 3307 3115 5 1071 297 0 0 0 chr15 63817086 63817119 -39677855 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1071 294 258 55 22 chr15 63817597 63817688 -39677286 + PB1D10 SINE Alu 15 108 -9 5 1071 971 245 20 0 chr15 63817790 63817990 -39676984 - B3 SINE B2 -5 211 8 5 1071 511 153 20 10 chr15 63818604 63818703 -39676271 - B1_Mur1 SINE Alu 0 149 50 5 1071 186 43 0 0 chr15 63818707 63818730 -39676244 + (TTA)n Simple_repeat Simple_repeat 2 24 0 5 1071 458 237 153 44 chr15 63819091 63819228 -39675746 - RSINE1 SINE B4 -4 161 10 5 1071 186 103 0 0 chr15 63819264 63819293 -39675681 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 5 1071 1209 41 7 0 chr15 63819293 63819439 -39675535 - B1_Mm SINE Alu 0 147 1 5 1071 680 322 44 19 chr15 63819444 63819650 -39675324 - B4A SINE B4 -68 224 14 5 1071 232 280 16 123 chr15 63819777 63819801 -39675173 + MT2B LTR ERVL 148 158 -443 5 1071 425 245 48 10 chr15 63819801 63819904 -39675070 + B1_Mur1 SINE Alu 2 108 -41 5 1071 603 0 0 0 chr15 63819920 63819987 -39674987 + (GAAAA)n Simple_repeat Simple_repeat 2 68 0 5 1071 326 289 50 14 chr15 63820803 63820918 -39674056 + PB1D10 SINE Alu 2 127 0 5 1071 260 316 25 0 chr15 63820922 63821001 -39673973 + ID4_ SINE ID 1 81 -2 5 1071 798 325 94 4 chr15 63821083 63821327 -39673647 + B4A SINE B4 11 276 -16 5 1071 329 0 24 0 chr15 63821337 63821378 -39673596 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1071 265 271 255 18 chr15 63821398 63821676 -39673298 + L1M4 LINE L1 4769 5112 -1034 5 1071 285 214 226 0 chr15 63821680 63821764 -39673210 - ID_B1 SINE B4 -1 223 121 5 1071 686 203 111 50 chr15 63822076 63822362 -39672612 - ORR1D1 LTR MaLR -14 370 8 5 1071 312 265 51 8 chr15 63822368 63822486 -39672488 + L1M4 LINE L1 5169 5291 -855 5 1071 586 250 30 15 chr15 63823167 63823301 -39671673 + B1F SINE Alu 1 136 -13 5 1071 405 0 0 0 chr15 63823302 63823347 -39671627 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1071 758 214 95 71 chr15 63823771 63823982 -39670992 + B3 SINE B2 1 216 0 5 1071 435 218 0 0 chr15 63824084 63824185 -39670789 + (TA)n Simple_repeat Simple_repeat 2 102 0 5 1071 226 115 0 37 chr15 63824482 63824536 -39670438 + A-rich Low_complexity Low_complexity 3 54 0 5 1071 858 277 62 47 chr15 63824979 63825312 -39669662 + MTD LTR MaLR 22 403 -16 5 1071 349 241 108 0 chr15 63825653 63825666 -39669308 - PB1D7 SINE Alu -12 108 18 5 1071 395 203 43 0 chr15 63825666 63825735 -39669239 - ID_B1 SINE B4 -54 170 99 5 1071 190 349 35 77 chr15 63826439 63826582 -39668392 + MIRb SINE MIR 97 233 -35 5 1071 218 303 119 0 chr15 63827878 63827987 -39666987 + RSINE1 SINE B4 42 163 -2 5 1071 351 0 0 0 chr15 63828940 63828979 -39665995 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1071 21 82 0 0 chr15 63829280 63829329 -39665645 + GC_rich Low_complexity Low_complexity 1 49 0 5 1071 25 0 0 0 chr15 63829392 63829417 -39665557 + GC_rich Low_complexity Low_complexity 1 25 0 5 1071 32 26 0 0 chr15 63829521 63829560 -39665414 + GC_rich Low_complexity Low_complexity 1 39 0 5 1071 326 279 18 88 chr15 63830566 63830680 -39664294 - Charlie4z DNA MER1_type -4 163 58 5 1071 233 304 228 10 chr15 63831626 63831819 -39663155 - MIR SINE MIR -25 237 3 5 1071 400 262 69 94 chr15 63831867 63831919 -39663055 + B3A SINE B2 2 53 -145 5 133 980 134 0 11 chr15 63831919 63832100 -39662874 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 1072 400 262 69 94 chr15 63832100 63832249 -39662725 + B3A SINE B2 54 198 0 5 1072 223 243 27 41 chr15 63832787 63832860 -39662114 + ID SINE ID 1 72 -152 5 1072 227 345 0 0 chr15 63833961 63834045 -39660929 - L1M5 LINE L1 -472 5652 5569 5 1072 276 200 0 0 chr15 63834860 63834920 -39660054 + GA-rich Low_complexity Low_complexity 2 61 0 5 1072 342 220 87 29 chr15 63835020 63835123 -39659851 - L1ME4a LINE L1 0 6124 6016 5 1072 579 266 58 13 chr15 63836137 63836293 -39658681 + RSINE1 SINE B4 3 165 0 5 1072 351 0 0 0 chr15 63836423 63836462 -39658512 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1072 203 250 18 0 chr15 63836633 63836670 -39658304 + polypyrimidine Low_complexity Low_complexity 20 57 0 5 1072 1180 61 14 0 chr15 63836670 63836817 -39658157 - B1_Mur4 SINE Alu 0 150 2 6 1072 203 250 18 0 chr15 63836817 63836835 -39658139 + polypyrimidine Low_complexity Low_complexity 2 19 0 6 1072 1055 261 94 7 chr15 63837020 63837306 -39657668 + MTEb LTR MaLR 68 378 -1 6 1072 224 218 146 0 chr15 63837959 63838014 -39656960 + L2a LINE L2 3339 3401 -25 6 1072 669 268 136 5 chr15 63838041 63838225 -39656749 + B3 SINE B2 1 208 -8 6 1072 927 256 13 40 chr15 63838272 63838500 -39656474 + ID_B1 SINE B4 1 222 -2 6 1072 1324 244 21 99 chr15 63840228 63840667 -39654307 - MTE2a LTR MaLR -14 405 6 6 1072 198 0 0 0 chr15 63840948 63840970 -39654004 + (TG)n Simple_repeat Simple_repeat 2 23 0 6 1072 227 179 32 97 chr15 63841716 63841778 -39653196 - MLT1I LTR MaLR 0 411 354 6 1072 1091 247 39 31 chr15 63842135 63842394 -39652580 + B4 SINE B4 3 263 -29 6 1072 204 40 0 0 chr15 63842401 63842426 -39652548 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1072 642 26 0 0 chr15 63842426 63842501 -39652473 + (GA)n Simple_repeat Simple_repeat 2 77 0 6 1072 246 250 0 0 chr15 63842567 63842619 -39652355 - MER5B DNA MER1_type -123 55 4 6 1072 356 253 33 11 chr15 63843145 63843237 -39651737 + MTD LTR MaLR 3 96 -323 6 1072 1281 159 56 0 chr15 63843238 63843452 -39651522 + URR1A DNA MER1_type 1 226 0 6 1072 1052 249 122 20 chr15 63843452 63843751 -39651223 + MTD LTR MaLR 90 419 0 6 1072 249 216 79 0 chr15 63844586 63844664 -39650310 + MIR SINE MIR 65 154 -114 6 1072 258 295 58 88 chr15 63844893 63845064 -39649910 + MLT1L LTR MaLR 119 284 -326 6 1072 294 229 71 19 chr15 63846331 63846434 -39648540 + B1F1 SINE Alu 3 118 -2 6 1072 561 174 0 0 chr15 63846553 63846685 -39648289 + (TG)n Simple_repeat Simple_repeat 2 133 0 6 1072 711 256 39 0 chr15 63846686 63846842 -39648132 - RSINE1 SINE B4 0 165 4 6 1072 338 316 57 31 chr15 63847240 63847433 -39647541 + MLT1K LTR MaLR 94 291 -304 6 1072 324 0 0 0 chr15 63848739 63848775 -39646199 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1072 492 18 0 0 chr15 63848775 63848831 -39646143 + (CA)n Simple_repeat Simple_repeat 1 57 0 6 1072 196 265 0 0 chr15 63848994 63849043 -39645931 + L3 LINE CR1 4145 4193 -296 6 1072 250 361 52 0 chr15 63849233 63849330 -39645644 + B1F1 SINE Alu 46 147 -2 6 1072 1053 292 119 31 chr15 63849549 63849647 -39645327 + Lx8 LINE L1 6292 6400 -1073 6 1072 414 0 0 0 chr15 63849647 63849693 -39645281 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1072 1053 292 119 31 chr15 63849693 63850049 -39644925 + Lx8 LINE L1 6401 6785 -688 6 1072 1173 158 44 19 chr15 63850413 63850619 -39644355 + B3 SINE B2 1 211 -5 6 1072 771 258 223 60 chr15 63851053 63851569 -39643405 + Lx9 LINE L1 7030 7629 -15 6 1072 281 265 147 30 chr15 63851592 63851722 -39643252 + MIR SINE MIR 137 268 0 6 1072 423 0 0 0 chr15 63852124 63852171 -39642803 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1072 336 272 27 64 chr15 63852654 63852764 -39642210 + RSINE1 SINE B4 17 122 -43 6 1072 1094 330 67 2 chr15 63852810 63853211 -39641763 + MamRep137 DNA TcMar? 13 439 -5 6 1072 316 282 104 22 chr15 63853296 63853430 -39641544 + L1ME3 LINE L1 6018 6162 0 6 1072 251 313 76 8 chr15 63854055 63854187 -39640787 + MIR3 SINE MIR 5 145 -63 6 1072 242 338 0 0 chr15 63854332 63854400 -39640574 + RMER30 DNA MER1_type 7 74 -128 6 1072 405 217 121 178 chr15 63854402 63854559 -39640415 + B1_Mur2 SINE Alu 2 149 0 6 1072 180 0 0 0 chr15 63854585 63854605 -39640369 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 6 1072 707 296 33 11 chr15 63854654 63854835 -39640139 + B3 SINE B2 2 186 -30 6 1072 743 201 15 0 chr15 63854831 63854965 -39640009 + B1_Mur1 SINE Alu 14 149 0 6 1072 442 252 58 10 chr15 63854976 63855080 -39639894 + RMER30 DNA MER1_type 86 194 -8 6 1072 218 333 0 0 chr15 63855150 63855213 -39639761 + G-rich Low_complexity Low_complexity 1 63 0 6 1072 218 255 58 52 chr15 63856033 63856207 -39638767 + (CATA)n Simple_repeat Simple_repeat 1 175 0 6 1072 384 205 23 69 chr15 63856138 63856311 -39638663 + (CATATA)n Simple_repeat Simple_repeat 6 170 0 6 1072 424 213 39 51 chr15 63856242 63856420 -39638554 + (CATA)n Simple_repeat Simple_repeat 4 179 0 6 1072 257 288 19 52 chr15 63856338 63856492 -39638482 + (CA)n Simple_repeat Simple_repeat 1 149 0 6 1072 464 184 10 0 chr15 63856503 63856601 -39638373 + (TA)n Simple_repeat Simple_repeat 2 100 0 6 1072 338 232 12 47 chr15 63857390 63857476 -39637498 + B4 SINE B4 146 228 -64 6 1072 812 66 9 0 chr15 63857501 63857607 -39637367 + U6 snRNA snRNA 1 107 0 6 1072 647 223 53 23 chr15 63857624 63857757 -39637217 + RSINE1 SINE B4 12 148 -17 6 1072 330 213 223 36 chr15 63857793 63857905 -39637069 + RSINE1 SINE B4 16 148 -17 6 1072 291 85 0 0 chr15 63857909 63857956 -39637018 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 6 1072 414 254 223 0 chr15 63857985 63858115 -39636859 + RSINE1 SINE B4 3 161 -4 6 1072 194 250 87 14 chr15 63858651 63858720 -39636254 + MIRb SINE MIR 187 260 -8 6 1072 977 234 98 36 chr15 63860207 63860482 -39634492 + B4A SINE B4 1 292 0 6 1072 267 130 0 143 chr15 63860757 63860820 -39634154 + 4.5SRNA scRNA scRNA 35 88 -6 6 1072 723 111 0 27 chr15 63860768 63860879 -39634095 + B1_Mur1 SINE Alu 42 149 0 6 1072 375 227 13 0 chr15 63861131 63861206 -39633768 - ID4 SINE ID 0 83 8 6 1072 468 0 0 0 chr15 63863195 63863247 -39631727 + (TCCC)n Simple_repeat Simple_repeat 1 52 0 6 1072 327 315 7 46 chr15 63863694 63863847 -39631127 + MIRb SINE MIR 77 223 -45 6 1072 201 74 0 0 chr15 63864625 63864652 -39630322 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 6 1072 186 71 0 0 chr15 63865701 63865729 -39629245 + (CAA)n Simple_repeat Simple_repeat 1 28 0 6 1072 2692 183 99 8 chr15 63865797 63866410 -39628564 + RMER1B Other Other 396 1064 -2 6 1072 603 296 35 5 chr15 63866541 63866741 -39628233 - ID_B1 SINE B4 -18 206 1 6 1072 528 304 22 7 chr15 63867396 63867532 -39627442 + ID_B1 SINE B4 82 219 -5 6 1072 630 328 109 25 chr15 63867807 63868164 -39626810 - MLT1D LTR MaLR -116 389 3 6 1072 519 101 0 0 chr15 63868378 63868457 -39626517 + (GGGAGA)n Simple_repeat Simple_repeat 5 83 0 6 1072 468 0 0 0 chr15 63868707 63868759 -39626215 + (CAAAA)n Simple_repeat Simple_repeat 5 56 0 6 1072 183 42 0 0 chr15 63868978 63869002 -39625972 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 6 1072 819 183 192 11 chr15 63869017 63869199 -39625775 + B3 SINE B2 1 215 -1 6 1072 642 198 37 22 chr15 63869217 63869351 -39625623 - B1_Mur1 SINE Alu -13 136 1 6 1072 845 201 7 0 chr15 63869407 63869551 -39625423 + B1_Mur2 SINE Alu 5 149 0 6 1072 838 193 119 0 chr15 63869996 63870172 -39624802 + B3 SINE B2 1 197 -19 6 1072 568 223 91 15 chr15 63870190 63870322 -39624652 + B1_Mus2 SINE Alu 6 147 0 6 1072 228 258 47 123 chr15 63871347 63871453 -39623521 + MLT1L LTR MaLR 345 442 -168 6 1072 350 186 128 64 chr15 63873741 63873850 -39621124 + PB1D10 SINE Alu 2 117 -32 6 1072 332 301 58 0 chr15 63873799 63873902 -39621072 + RSINE1 SINE B4 57 165 0 6 1072 352 325 30 43 chr15 63874014 63874178 -39620796 + RSINE1 SINE B4 3 164 -1 6 1072 981 117 28 0 chr15 63874234 63874379 -39620595 + B1_Mur4 SINE Alu 2 150 0 6 1072 3118 27 14 0 chr15 63874408 63874773 -39620201 + L1Md_F3 LINE L1 6214 6583 -1 6 1072 631 0 25 0 chr15 63876630 63876709 -39618265 + (TC)n Simple_repeat Simple_repeat 2 82 0 6 1072 210 316 132 0 chr15 63876750 63876826 -39618148 + ID_B1 SINE B4 11 96 -128 6 1072 1218 255 50 56 chr15 63876835 63877192 -39617782 - MTE2b LTR MaLR -23 356 2 6 1072 317 257 0 54 chr15 63877222 63877296 -39617678 + ID_B1 SINE B4 136 205 -19 6 1072 207 0 0 0 chr15 63877517 63877540 -39617434 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1072 488 328 91 49 chr15 63879208 63879516 -39615458 - MTEa LTR MaLR -48 331 11 6 1072 389 243 137 89 chr15 63879623 63879813 -39615161 + ID_B1 SINE B4 8 206 -18 6 1072 518 277 101 7 chr15 63880714 63880852 -39614122 + RSINE1 SINE B4 15 165 0 6 1072 683 261 62 19 chr15 63882305 63882516 -39612458 + ID_B1 SINE B4 1 220 -4 6 1072 325 254 28 0 chr15 63882522 63882593 -39612381 + BC1_Mm scRNA scRNA 1 73 -79 6 1072 612 40 0 0 chr15 63882594 63882669 -39612305 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 6 1072 402 85 0 0 chr15 63882870 63882929 -39612045 + (TG)n Simple_repeat Simple_repeat 1 59 0 6 1072 638 293 90 33 chr15 63884146 63884349 -39610625 + B4 SINE B4 50 265 -27 6 1072 354 45 0 0 chr15 63884349 63884393 -39610581 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1072 214 234 137 78 chr15 63885507 63885609 -39609365 - MIR SINE MIR -136 132 25 6 1072 236 303 53 0 chr15 63885896 63885972 -39609002 - MIRc SINE MIR -155 113 34 6 1072 350 260 9 9 chr15 63886983 63887088 -39607886 + Lx8 LINE L1 6967 7071 -402 6 1072 321 26 0 0 chr15 63887270 63887308 -39607666 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1072 882 95 0 0 chr15 63887671 63887797 -39607177 + (TTCC)n Simple_repeat Simple_repeat 3 128 0 6 1072 250 37 12 0 chr15 63888264 63888300 -39606674 - L2b LINE L2 -15 3372 3333 6 1072 206 296 178 22 chr15 63888267 63888402 -39606572 - MIRb SINE MIR -14 254 99 6 1072 192 67 100 0 chr15 63889052 63889082 -39605892 - MIR SINE MIR -118 144 112 6 1072 432 270 35 0 chr15 63889272 63889387 -39605587 - PB1D7 SINE Alu -1 119 1 7 1072 399 291 0 10 chr15 63890042 63890146 -39604828 + PB1D10 SINE Alu 5 107 -10 7 1072 470 17 17 0 chr15 63890293 63890352 -39604622 + (TC)n Simple_repeat Simple_repeat 2 61 0 7 1072 180 0 0 0 chr15 63890355 63890375 -39604599 + (CA)n Simple_repeat Simple_repeat 2 21 0 7 1072 216 0 0 0 chr15 63890562 63890586 -39604388 + (A)n Simple_repeat Simple_repeat 1 24 0 7 1072 366 287 75 37 chr15 63890973 63891107 -39603867 - MIRb SINE MIR -117 151 13 7 1072 198 0 0 0 chr15 63891347 63891369 -39603605 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1072 222 91 0 0 chr15 63891370 63891403 -39603571 + (ATG)n Simple_repeat Simple_repeat 3 35 0 7 1072 190 136 0 43 chr15 63891871 63891917 -39603057 + (CAG)n Simple_repeat Simple_repeat 3 46 0 7 1072 252 195 11 44 chr15 63892029 63892120 -39602854 + (CCCCG)n Simple_repeat Simple_repeat 4 91 0 7 1072 187 304 131 52 chr15 63893274 63893427 -39601547 - MIRb SINE MIR -70 198 34 7 1072 291 181 31 6 chr15 63894570 63894654 -39600320 + PB1D7 SINE Alu 52 149 0 7 1072 901 142 22 0 chr15 63894660 63894794 -39600180 + B1_Mur1 SINE Alu 5 141 -8 7 1072 450 0 0 0 chr15 63894794 63894844 -39600130 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 7 1072 2518 25 0 0 chr15 63895305 63895591 -39599383 - L1Md_A LINE L1 0 6582 6297 7 1072 206 236 0 0 chr15 63895591 63895646 -39599328 + T-rich Low_complexity Low_complexity 1 55 0 7 1072 488 273 133 0 chr15 63895646 63895774 -39599200 - ID_B1 SINE B4 0 224 80 7 1072 671 278 70 36 chr15 63896392 63896694 -39598280 - MLT1A0 LTR MaLR -53 312 1 7 1072 530 226 26 0 chr15 63896869 63896984 -39597990 + PB1D9 SINE Alu 2 119 -1 7 1072 420 267 56 49 chr15 63897380 63897522 -39597452 + MER2 DNA MER2_type 175 317 -28 7 1072 681 227 0 0 chr15 63897522 63897694 -39597280 + (TA)n Simple_repeat Simple_repeat 1 172 0 7 1072 606 131 0 0 chr15 63897717 63897816 -39597158 + (CA)n Simple_repeat Simple_repeat 2 100 0 7 1072 670 221 226 6 chr15 63898021 63898198 -39596776 - ID_B1 SINE B4 -7 217 2 7 1072 199 228 72 48 chr15 63898768 63898851 -39596123 - MER5A DNA MER1_type -24 165 81 7 1072 273 257 26 51 chr15 63898862 63898940 -39596034 - ID4_ SINE ID -70 82 7 7 1072 482 266 18 0 chr15 63898940 63899053 -39595921 - PB1D10 SINE Alu -1 116 2 7 1072 315 258 72 41 chr15 63899502 63899599 -39595375 + B1F2 SINE Alu 1 100 -49 7 1072 282 193 186 81 chr15 63899599 63899626 -39595348 + ID_B1 SINE B4 82 218 -6 7 1072 2675 87 81 3 chr15 63899777 63900148 -39594826 - MTB LTR MaLR 0 400 1 7 1072 8137 71 16 13 chr15 63900148 63900853 -39594121 - MTB-int LTR MaLR 0 1098 391 7 1072 1615 47 0 10 chr15 63900853 63901047 -39593927 - B2_Mm1a SINE B2 0 193 2 7 1072 8137 71 16 13 chr15 63901047 63901435 -39593539 - MTB-int LTR MaLR -708 390 1 7 1072 3613 40 65 0 chr15 63901437 63901615 -39593359 - MT2C_Mm LTR ERVL 0 475 297 7 1072 564 15 0 0 chr15 63901615 63901680 -39593294 + (GA)n Simple_repeat Simple_repeat 2 66 0 7 1072 3613 40 65 0 chr15 63901680 63901947 -39593027 - MT2C_Mm LTR ERVL -179 296 2 7 1072 977 127 15 0 chr15 63902521 63902655 -39592319 + B1_Mur3 SINE Alu 1 136 -13 7 1072 180 176 0 0 chr15 63902663 63902697 -39592277 + GA-rich Low_complexity Low_complexity 3 36 0 7 1072 1184 239 101 14 chr15 63902958 63903299 -39591675 - MTE2b LTR MaLR 0 370 1 7 1072 278 321 35 12 chr15 63904220 63904305 -39590669 - B1F1 SINE Alu -54 95 9 7 1072 823 196 0 7 chr15 63904351 63904500 -39590474 + B1_Mur1 SINE Alu 2 149 0 7 1072 234 310 100 33 chr15 63904652 63904772 -39590202 + L2b LINE L2 3228 3355 -20 7 1072 333 0 0 0 chr15 63904979 63905016 -39589958 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1072 714 122 0 0 chr15 63905016 63905155 -39589819 + (GA)n Simple_repeat Simple_repeat 2 140 0 7 1072 414 342 175 16 chr15 63905323 63905626 -39589348 + MLT1D LTR MaLR 150 500 -5 7 1072 202 297 30 113 chr15 63906158 63906291 -39588683 - MIRc SINE MIR -87 181 60 7 1072 405 245 0 109 chr15 63906432 63906542 -39588432 - PB1D7 SINE Alu 0 120 23 7 1072 1555 105 41 16 chr15 63908149 63908392 -39586582 + Lx3C LINE L1 6721 6969 -7 7 1072 270 317 45 90 chr15 63908619 63908748 -39586226 + B4A SINE B4 98 219 -73 7 1072 210 91 0 0 chr15 63908748 63908781 -39586193 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 7 1072 270 317 45 90 chr15 63908781 63908807 -39586167 + B4A SINE B4 220 246 -46 7 1072 477 163 0 0 chr15 63908814 63908906 -39586068 + GA-rich Low_complexity Low_complexity 1 92 0 7 1072 366 272 11 32 chr15 63909053 63909148 -39585826 - B1F1 SINE Alu -17 132 40 7 1072 344 68 0 52 chr15 63909248 63909325 -39585649 + (TTTTG)n Simple_repeat Simple_repeat 1 73 0 7 1072 835 130 13 76 chr15 63909325 63909483 -39585491 - B1_Mus1 SINE Alu 0 148 1 7 1072 191 328 0 15 chr15 63909494 63909559 -39585415 - MIR SINE MIR -120 142 79 7 1072 317 320 108 52 chr15 63909572 63909892 -39585082 + MLT1A1 LTR MaLR 33 400 -8 7 1072 253 294 41 25 chr15 63910158 63910260 -39584714 + B1F SINE Alu 13 117 0 7 1072 924 51 0 0 chr15 63910262 63910380 -39584594 + (CCAA)n Simple_repeat Simple_repeat 2 119 0 7 1072 661 294 127 2 chr15 63910451 63910828 -39584146 + L1MB7 LINE L1 5293 5729 -449 7 1072 189 0 0 0 chr15 63910846 63910867 -39584107 + (CACAA)n Simple_repeat Simple_repeat 2 22 0 7 1072 365 265 29 19 chr15 63910931 63911035 -39583939 + PB1D10 SINE Alu 13 117 0 7 1072 439 296 79 0 chr15 63911143 63911332 -39583642 + L1MB7 LINE L1 5973 6176 -8 7 1072 534 254 181 6 chr15 63911354 63911520 -39583454 + ID_B1 SINE B4 2 196 -28 7 1072 712 167 78 16 chr15 63911593 63911721 -39583253 + B1_Mur4 SINE Alu 5 140 -10 7 1072 396 59 0 0 chr15 63911721 63911772 -39583202 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1072 540 0 0 0 chr15 63911772 63911831 -39583143 + (GA)n Simple_repeat Simple_repeat 2 61 0 7 1072 852 222 89 20 chr15 63911897 63912099 -39582875 - B3 SINE B2 0 216 1 7 1072 808 74 9 9 chr15 63912123 63912232 -39582742 + PB1D9 SINE Alu 2 110 -10 7 1072 222 37 0 0 chr15 63912232 63912259 -39582715 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 7 1072 272 336 37 9 chr15 63912500 63912608 -39582366 + MER63B DNA AcHobo 280 390 -46 7 1072 461 257 26 0 chr15 63912617 63912730 -39582244 - PB1D10 SINE Alu -1 116 1 7 1072 412 214 74 19 chr15 63912783 63912945 -39582029 - Lx9 LINE L1 -22 7622 7452 7 1072 291 284 87 94 chr15 63913297 63913530 -39581444 - B4 SINE B4 -1 291 69 7 1072 204 40 0 0 chr15 63913826 63913851 -39581123 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 1072 394 185 15 49 chr15 63913851 63913940 -39581034 - PB1D10 SINE Alu -31 96 1 7 1072 325 291 34 95 chr15 63913940 63914000 -39580974 - ID SINE ID -147 77 27 7 1072 1225 300 171 28 chr15 63914226 63914870 -39580104 + MER21B LTR ERV1 12 747 -116 7 1072 213 250 33 16 chr15 63915072 63915133 -39579841 - MIRc SINE MIR -115 153 92 7 1072 488 211 0 0 chr15 63915171 63915261 -39579713 + B1F2 SINE Alu 22 111 -38 7 1072 403 245 0 81 chr15 63915261 63915282 -39579692 + ID_B1 SINE B4 103 204 -20 7 1072 389 267 211 6 chr15 63918070 63918236 -39576738 + RMER15 LTR ERVL 373 572 -3 7 1072 1135 51 7 0 chr15 63922123 63922260 -39572714 + B1_Mus1 SINE Alu 1 138 -10 7 1072 1020 144 34 11 chr15 63922655 63922830 -39572144 + B2_Mm2 SINE B2 3 181 -14 7 1072 198 0 0 0 chr15 63922830 63922852 -39572122 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 7 1072 573 15 0 0 chr15 63923842 63923908 -39571066 + (TG)n Simple_repeat Simple_repeat 2 67 0 7 1072 285 29 0 0 chr15 63923947 63923981 -39570993 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1072 966 128 0 0 chr15 63926446 63926587 -39568387 - B1_Mus2 SINE Alu 0 147 7 7 1072 1020 95 15 0 chr15 63926669 63926806 -39568168 - B1_Mus1 SINE Alu -8 140 2 7 1072 252 0 0 0 chr15 63926903 63926931 -39568043 + (A)n Simple_repeat Simple_repeat 1 28 0 7 1072 288 0 0 0 chr15 63927308 63927340 -39567634 + (CTCA)n Simple_repeat Simple_repeat 3 34 0 7 1072 1657 167 130 9 chr15 63927343 63927682 -39567292 + ORR1C2 LTR MaLR 1 380 -4 7 1072 251 363 139 5 chr15 63927687 63927838 -39567136 + MIR SINE MIR 73 239 -29 7 1072 917 161 28 0 chr15 63928198 63928341 -39566633 + B3 SINE B2 1 147 -69 7 1072 1486 49 38 0 chr15 63928530 63928715 -39566259 + B2_Mm1t SINE B2 2 193 0 7 1072 245 255 18 101 chr15 63929050 63929159 -39565815 + MLT1A1 LTR MaLR 290 389 -19 7 1072 201 74 0 0 chr15 63929736 63929763 -39565211 + (TTC)n Simple_repeat Simple_repeat 2 28 0 7 1072 224 211 105 66 chr15 63930945 63931021 -39563953 - L2a LINE L2 -1 3425 3347 7 1072 573 165 0 94 chr15 63931255 63931382 -39563592 - PB1D9 SINE Alu 0 120 6 7 1072 370 235 0 143 chr15 63931285 63931401 -39563573 - MT2B LTR ERVL -351 250 152 7 1072 345 306 40 16 chr15 63931401 63931527 -39563447 + RSINE1 SINE B4 4 132 -33 7 1072 369 0 0 0 chr15 63931545 63931586 -39563388 + (CA)n Simple_repeat Simple_repeat 1 41 0 7 1072 1002 160 16 26 chr15 63932474 63932666 -39562308 + URR1B DNA MER1_type 29 218 -7 7 1072 441 54 0 0 chr15 63933225 63933281 -39561693 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 1072 829 162 0 15 chr15 63933352 63933484 -39561490 + B1_Mur2 SINE Alu 2 131 -18 7 1072 192 152 0 0 chr15 63933505 63933538 -39561436 + A-rich Low_complexity Low_complexity 2 34 0 7 1072 269 362 34 8 chr15 63933540 63933657 -39561317 + PB1D7 SINE Alu 1 120 0 7 1072 981 170 160 0 chr15 63934346 63934540 -39560434 - URR1B DNA MER1_type 0 225 1 8 1072 310 242 135 1 chr15 63936984 63937089 -39557885 + MIRm SINE MIR 36 152 -124 8 1072 229 214 17 51 chr15 63937147 63937206 -39557768 + U5 snRNA snRNA 30 86 -30 8 1072 505 246 17 9 chr15 63938456 63938571 -39556403 + PB1D10 SINE Alu 1 116 -1 8 1072 1236 41 0 0 chr15 63938864 63939011 -39555963 + B1_Mus1 SINE Alu 2 148 0 8 1072 210 37 0 0 chr15 63939045 63939072 -39555902 + (CCAA)n Simple_repeat Simple_repeat 2 28 0 8 1072 743 243 51 31 chr15 63939100 63939242 -39555732 + B4 SINE B4 3 152 -140 8 1072 519 17 0 0 chr15 63939242 63939302 -39555672 + (TCCA)n Simple_repeat Simple_repeat 2 61 0 8 1072 743 243 51 31 chr15 63939302 63939354 -39555620 + B4 SINE B4 153 201 -91 8 1072 270 280 54 14 chr15 63939395 63939546 -39555428 + MLT1B LTR MaLR 271 451 -16 8 1072 226 297 96 51 chr15 63939594 63939750 -39555224 + LTR16A1 LTR ERVL 285 447 -9 8 1072 432 284 25 25 chr15 63939781 63939900 -39555074 + PB1D7 SINE Alu 1 119 -1 8 1072 231 208 18 54 chr15 63940752 63940808 -39554166 + Tigger12c DNA MER2_type 236 289 -445 8 1072 283 319 106 0 chr15 63941400 63941513 -39553461 - L2a LINE L2 -4 3422 3298 8 1072 236 252 17 38 chr15 63941791 63941865 -39553109 - ID4_ SINE ID -51 101 30 8 1072 1087 287 106 14 chr15 63942794 63943296 -39551678 + Lx8 LINE L1 6926 7473 0 8 1072 223 329 12 0 chr15 63944567 63944652 -39550322 - MIRc SINE MIR -13 255 170 8 1072 198 0 0 0 chr15 63944822 63944844 -39550130 + (C)n Simple_repeat Simple_repeat 1 22 0 8 1072 180 27 53 26 chr15 63945766 63945804 -39549170 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 8 1072 1002 40 95 0 chr15 63945804 63945930 -39549044 - B1_Mus2 SINE Alu -9 138 1 8 1072 540 258 88 0 chr15 63945934 63946155 -39548819 - L1MA7 LINE L1 0 6291 6051 8 1072 24 0 0 0 chr15 63946709 63946733 -39548241 + AT_rich Low_complexity Low_complexity 1 24 0 8 1072 268 356 90 15 chr15 63948358 63948492 -39546482 + MIR3 SINE MIR 63 206 -2 8 1072 325 241 35 14 chr15 63951032 63951119 -39543855 - ID_B1 SINE B4 -133 91 2 8 1072 270 0 0 0 chr15 63951268 63951298 -39543676 + (T)n Simple_repeat Simple_repeat 1 30 0 8 1072 187 330 20 60 chr15 63952874 63952974 -39542000 + MIRm SINE MIR 42 137 -139 8 1072 311 269 208 12 chr15 63953107 63953273 -39541701 + MLT2C2 LTR ERVL 5 200 -214 8 1072 246 310 11 22 chr15 63953337 63953426 -39541548 + MLT2C2 LTR ERVL 447 534 -25 8 1072 560 250 207 17 chr15 63953886 63954065 -39540909 + B3 SINE B2 1 213 -3 8 1072 347 293 17 2 chr15 63954334 63954446 -39540528 - PB1D10 SINE Alu -3 117 3 8 1072 291 238 47 56 chr15 63954504 63954611 -39540363 + MLT1A LTR MaLR 65 170 -204 8 1072 226 314 77 122 chr15 63955582 63955763 -39539211 - Tigger7 DNA MER2_type -5 2486 2314 8 1072 231 221 21 72 chr15 63956148 63956229 -39538745 - B1F2 SINE Alu -58 91 9 8 1072 223 262 99 18 chr15 63956675 63956778 -39538196 - MIRc SINE MIR -54 154 44 8 1072 198 365 11 23 chr15 63957094 63957181 -39537793 + MIRb SINE MIR 70 155 -113 8 1072 427 311 0 24 chr15 63957241 63957366 -39537608 - B3A SINE B2 -16 182 61 8 1072 513 0 0 0 chr15 63958378 63958435 -39536539 + (TTA)n Simple_repeat Simple_repeat 2 58 0 8 1072 373 341 56 6 chr15 63962547 63962727 -39532247 + ORR1E LTR MaLR 2 190 -169 8 16 471 271 105 21 chr15 63963042 63963185 -39531789 - RSINE1 SINE B4 -6 159 5 8 1073 316 265 117 45 chr15 63963193 63963347 -39531627 + L1ME4a LINE L1 5835 5999 -125 8 1073 3378 91 0 4 chr15 63963791 63964245 -39530729 - L1_Mus3 LINE L1 -256 6380 5929 8 1073 1729 106 14 55 chr15 63964245 63964535 -39530439 + L1_Mus3 LINE L1 6360 6637 -1 8 1073 501 97 0 0 chr15 63964535 63964607 -39530367 + (GA)n Simple_repeat Simple_repeat 1 72 0 8 1073 647 267 72 9 chr15 63964722 63964930 -39530044 - B3A SINE B2 -1 215 4 8 1073 743 230 147 16 chr15 63965445 63965635 -39529339 - ID_B1 SINE B4 -8 216 2 8 1073 308 250 75 19 chr15 63967610 63967716 -39527258 - PB1D10 SINE Alu -1 116 5 8 1073 459 217 22 0 chr15 63969094 63969186 -39525788 - B1_Mur1 SINE Alu -11 138 45 8 1073 5136 76 0 11 chr15 63969976 63970642 -39524332 - L1_Mus1 LINE L1 0 6567 5909 8 1073 1443 66 0 0 chr15 63970642 63970823 -39524151 + L1_Mus1 LINE L1 5721 5901 -666 8 1073 418 326 85 13 chr15 63972004 63972240 -39522734 + L3b LINE CR1 33 285 -197 8 1073 191 297 106 29 chr15 63973290 63973394 -39521580 - MIRm SINE MIR -117 159 48 8 1073 789 229 86 5 chr15 63974868 63975066 -39519908 + B3 SINE B2 3 216 0 8 1073 317 320 15 23 chr15 63976282 63976413 -39518561 - MIR SINE MIR 0 262 133 8 1073 274 301 75 0 chr15 63977184 63977277 -39517697 + PB1D10 SINE Alu 18 117 0 8 1073 1305 253 24 39 chr15 63978413 63978796 -39516178 - MTEa LTR MaLR -2 377 1 8 1073 1156 61 0 13 chr15 63979024 63979173 -39515801 - B1_Mus2 SINE Alu 0 147 1 8 1073 242 292 153 32 chr15 63979264 63979388 -39515586 + MIR3 SINE MIR 4 142 -66 8 1073 192 40 0 0 chr15 63979684 63979709 -39515265 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 8 1073 3780 139 3 8 chr15 63979710 63980304 -39514670 - L1_Mur2 LINE L1 -142 5735 5145 8 1073 1169 182 247 20 chr15 63980761 63981053 -39513921 + MTC LTR MaLR 1 358 -63 8 1073 219 261 46 0 chr15 63981778 63981843 -39513131 - L3 LINE CR1 -3036 1453 1386 8 1073 378 0 0 0 chr15 63982025 63982067 -39512907 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 1073 289 22 43 22 chr15 63982087 63982133 -39512841 + (GGGA)n Simple_repeat Simple_repeat 3 49 0 8 1073 189 0 0 0 chr15 63986047 63986068 -39508906 + (TCTG)n Simple_repeat Simple_repeat 2 22 0 8 1073 806 202 112 20 chr15 63986098 63986295 -39508679 - B3 SINE B2 0 216 2 8 1073 228 86 0 0 chr15 63986479 63986514 -39508460 + (TATG)n Simple_repeat Simple_repeat 2 36 0 8 1073 561 253 66 7 chr15 63986517 63986668 -39508306 - RSINE1 SINE B4 -1 164 5 8 1073 222 62 0 0 chr15 63986865 63986897 -39508077 + (T)n Simple_repeat Simple_repeat 1 32 0 8 1073 921 172 0 20 chr15 63986908 63987056 -39507918 - B1_Mus1 SINE Alu -1 147 3 8 1073 210 71 0 0 chr15 63987825 63987853 -39507121 + (A)n Simple_repeat Simple_repeat 1 28 0 8 1073 385 284 95 0 chr15 63987946 63988062 -39506912 - RSINE1 SINE B4 -2 163 37 8 1073 836 253 108 94 chr15 63988155 63988517 -39506457 + MTE2a LTR MaLR 13 379 0 8 1073 221 0 35 0 chr15 63989164 63989193 -39505781 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 8 1073 347 167 229 0 chr15 63990197 63990293 -39504681 - PB1D9 SINE Alu 0 120 3 8 1073 243 269 0 8 chr15 63993349 63993414 -39501560 - MTEb LTR MaLR -317 62 1 8 1073 732 180 58 26 chr15 63993468 63993622 -39501352 - B2_Mm2 SINE B2 -34 161 3 8 1073 3250 48 13 0 chr15 63993655 63994050 -39500924 - L1Md_F3 LINE L1 -14 6570 6171 8 1073 761 288 150 37 chr15 63994066 63994525 -39500449 - L1MB5 LINE L1 -114 6050 5522 8 1073 1140 52 7 0 chr15 63994525 63994661 -39500313 - B1_Mus1 SINE Alu -10 138 2 8 1073 761 298 121 26 chr15 63994661 63995011 -39499963 - L1MB5 LINE L1 -653 5521 5137 8 1073 1818 63 0 0 chr15 63996429 63996651 -39498323 - L1_Mus1 LINE L1 -238 6329 6108 8 1073 1639 37 120 14 chr15 63996651 63996868 -39498106 + L1_Mus1 LINE L1 6326 6565 -2 8 1073 184 238 92 35 chr15 63997406 63997493 -39497481 + L3 LINE CR1 2778 2869 -1620 8 1073 23 33 0 0 chr15 63998484 63998514 -39496460 + AT_rich Low_complexity Low_complexity 1 30 0 8 1073 206 265 0 0 chr15 63998659 63998708 -39496266 + A-rich Low_complexity Low_complexity 1 49 0 8 1073 183 178 0 62 chr15 63999100 63999148 -39495826 + L3 LINE CR1 3836 3880 -609 8 1073 287 241 84 0 chr15 63999433 63999516 -39495458 + L1MC1 LINE L1 6109 6198 -135 8 1073 540 45 0 0 chr15 64000680 64000747 -39494227 + (TA)n Simple_repeat Simple_repeat 1 67 0 1 1073 414 108 0 0 chr15 64000747 64000821 -39494153 + (GA)n Simple_repeat Simple_repeat 1 74 0 2 1073 198 103 0 0 chr15 64000825 64000854 -39494120 + (GGAA)n Simple_repeat Simple_repeat 4 32 0 3 1073 250 312 25 0 chr15 64002398 64002478 -39492496 + B1F SINE Alu 68 149 0 4 1073 240 297 14 0 chr15 64002481 64002555 -39492419 + ID2 SINE ID 7 81 -2 5 1073 363 96 0 0 chr15 64003282 64003334 -39491640 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 1073 277 250 19 39 chr15 64004023 64004127 -39490847 - PB1D7 SINE Alu -1 119 18 7 1073 315 0 0 0 chr15 64005376 64005411 -39489563 + (TTA)n Simple_repeat Simple_repeat 2 36 0 8 1073 299 121 17 0 chr15 64006418 64006476 -39488498 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 9 1073 453 318 86 7 chr15 64006479 64006631 -39488343 - Lx5 LINE L1 -29 7021 6858 1 1073 863 254 56 35 chr15 64007541 64007826 -39487148 + B4 SINE B4 2 292 0 1 1073 290 243 0 0 chr15 64008910 64008980 -39485994 + PB1D10 SINE Alu 46 115 -2 1 1073 321 143 113 14 chr15 64009953 64010024 -39484950 + L1MB1 LINE L1 5832 5909 -280 1 1073 239 273 122 22 chr15 64010542 64010632 -39484342 + MLT2B3 LTR ERVL 1 99 -455 1 1073 202 318 65 45 chr15 64011831 64011986 -39482988 - MIRb SINE MIR -91 177 20 1 1073 232 351 0 13 chr15 64012555 64012630 -39482344 + MER5A DNA MER1_type 84 157 -32 1 1073 202 250 19 0 chr15 64013792 64013844 -39481130 + MIRm SINE MIR 221 273 -3 1 1073 291 278 65 43 chr15 64014805 64014944 -39480030 + MER91A DNA Tip100 4 145 -51 1 1073 23 33 0 0 chr15 64015940 64015970 -39479004 + AT_rich Low_complexity Low_complexity 1 30 0 1 1073 303 49 0 0 chr15 64016330 64016371 -39478603 + (CAGA)n Simple_repeat Simple_repeat 4 44 0 2 1073 732 262 191 13 chr15 64016699 64016997 -39477977 + Lx9 LINE L1 7052 7402 -242 2 1073 23 0 0 0 chr15 64017084 64017107 -39477867 + AT_rich Low_complexity Low_complexity 1 23 0 2 1073 1216 35 14 0 chr15 64017209 64017354 -39477620 - B1_Mm SINE Alu 0 147 1 2 1073 3174 55 2 5 chr15 64018520 64018920 -39476054 + L1Md_F2 LINE L1 6183 6581 -1 2 1073 226 294 99 22 chr15 64019223 64019404 -39475570 - L1MC4a LINE L1 -9 7873 7679 2 1073 675 0 0 0 chr15 64020034 64020109 -39474865 + (CAAAC)n Simple_repeat Simple_repeat 5 79 0 2 1073 305 259 77 8 chr15 64020367 64020484 -39474490 - MTEb LTR MaLR -2 377 253 2 1073 194 81 27 0 chr15 64022050 64022087 -39472887 + (TAAAAA)n Simple_repeat Simple_repeat 3 40 0 2 1073 422 264 276 6 chr15 64022097 64022253 -39472721 + Lx7 LINE L1 7090 7287 -409 2 1073 30 45 0 0 chr15 64022347 64022391 -39472583 + AT_rich Low_complexity Low_complexity 1 44 0 3 1073 1600 165 14 67 chr15 64022401 64022758 -39472216 + Lx7 LINE L1 7359 7696 0 2 1073 398 250 37 0 chr15 64023355 64023463 -39471511 - PB1D7 SINE Alu -6 114 3 3 1073 23 0 0 0 chr15 64023719 64023742 -39471232 + AT_rich Low_complexity Low_complexity 1 23 0 3 1073 402 303 139 30 chr15 64023909 64024212 -39470762 + L2 LINE L2 2093 2428 -991 3 1073 248 241 60 12 chr15 64026715 64026799 -39468175 + MER34A LTR ERV1 475 562 -9 3 1073 185 278 137 53 chr15 64026835 64026930 -39468044 + MIR SINE MIR 71 173 -89 3 1073 846 221 39 19 chr15 64027347 64027555 -39467419 - B3 SINE B2 -2 214 3 3 1073 412 286 156 0 chr15 64027818 64028017 -39466957 - MIR SINE MIR -31 231 2 3 1073 245 302 76 25 chr15 64028368 64028487 -39466487 + MIRc SINE MIR 23 147 -121 3 1073 1029 169 124 0 chr15 64028850 64029051 -39465923 + URR1A DNA MER1_type 1 226 0 3 1073 240 385 10 0 chr15 64030453 64030549 -39464425 + MER21B LTR ERV1 313 409 -454 4 1073 245 320 9 37 chr15 64030529 64030554 -39464420 - RSINE1 SINE B4 -60 105 2 4 1073 553 98 0 0 chr15 64030554 64030636 -39464338 - B2_Mm2 SINE B2 -113 82 1 4 1073 285 326 149 5 chr15 64030674 64030862 -39464112 + MER21B LTR ERV1 447 661 -202 4 1073 238 282 188 0 chr15 64031171 64031256 -39463718 + B3A SINE B2 2 102 -96 4 1073 228 250 110 14 chr15 64031419 64031492 -39463482 - ID4_ SINE ID -2 81 2 4 1073 1900 189 18 41 chr15 64031839 64032226 -39462748 - ORR1C1 LTR MaLR 0 378 1 4 1073 202 238 0 0 chr15 64032605 64032612 -39462362 + (CG)n Simple_repeat Simple_repeat 1 7 0 4 1073 441 95 0 0 chr15 64032612 64032675 -39462299 + (TG)n Simple_repeat Simple_repeat 1 63 0 4 1073 202 238 0 0 chr15 64032675 64032709 -39462265 + (CG)n Simple_repeat Simple_repeat 2 35 0 4 1073 356 105 53 0 chr15 64032711 64032768 -39462206 - MTC LTR MaLR -8 413 354 4 1073 2427 266 101 18 chr15 64033432 64034325 -39460649 - RCHARR1 DNA MER1_type -7 967 1 5 1073 928 200 53 14 chr15 64034739 64034947 -39460027 + B3 SINE B2 1 216 0 5 1073 22 35 0 0 chr15 64035047 64035076 -39459898 + AT_rich Low_complexity Low_complexity 1 29 0 5 1073 21 0 0 0 chr15 64035678 64035699 -39459275 + AT_rich Low_complexity Low_complexity 1 21 0 5 1073 556 240 74 74 chr15 64035732 64035921 -39459053 + ID_B1 SINE B4 35 223 -1 5 1073 326 332 69 37 chr15 64036280 64036496 -39458478 - MLT1F1 LTR MaLR -340 229 7 5 1073 967 226 58 4 chr15 64038225 64038483 -39456491 + MT2A LTR ERVL 1 272 -261 5 1073 415 236 6 8 chr15 64038460 64038576 -39456398 + MT2A LTR ERVL 347 490 -94 5 1073 22 56 0 0 chr15 64038678 64038714 -39456260 + AT_rich Low_complexity Low_complexity 1 36 0 5 1073 232 159 68 42 chr15 64039412 64039530 -39455444 + (TATAA)n Simple_repeat Simple_repeat 1 121 0 5 1073 186 361 114 38 chr15 64040829 64041013 -39453961 - MIRb SINE MIR -29 239 42 5 1073 826 240 131 54 chr15 64041120 64041472 -39453502 + MTEa LTR MaLR 1 379 0 6 1073 231 114 0 0 chr15 64042073 64042108 -39452866 + (T)n Simple_repeat Simple_repeat 1 35 0 6 1073 323 201 286 32 chr15 64042466 64042620 -39452354 + MTC LTR MaLR 203 395 -26 6 1073 1939 154 133 34 chr15 64044968 64045351 -39449623 + MTC LTR MaLR 1 421 0 6 1073 191 356 137 30 chr15 64045377 64045545 -39449429 - MIRb SINE MIR -48 220 35 6 1073 993 115 13 20 chr15 64046703 64046854 -39448120 - B1_Mur4 SINE Alu 0 150 1 6 1073 210 331 15 23 chr15 64047561 64047691 -39447283 + MIR SINE MIR 11 139 -123 6 1073 354 191 29 14 chr15 64048283 64048352 -39446622 + ID4_ SINE ID 2 71 -12 6 1073 219 146 0 0 chr15 64048558 64048599 -39446375 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 6 1073 444 234 31 0 chr15 64050586 64050714 -39444260 - MER2 DNA MER2_type -64 281 150 6 1073 453 288 38 3 chr15 64051008 64051151 -39443823 + B1F SINE Alu 6 149 0 7 1073 225 348 84 34 chr15 64051262 64051381 -39443593 - ID_B1 SINE B4 -17 207 83 7 1073 464 261 163 61 chr15 64052719 64052915 -39442059 + B3 SINE B2 1 216 0 7 1073 355 292 76 64 chr15 64053038 64053228 -39441746 + MTD LTR MaLR 1 208 -211 7 1073 1155 29 0 35 chr15 64053228 64053373 -39441601 + B1_Mus1 SINE Alu 2 141 -7 7 1073 314 306 130 73 chr15 64053373 64053385 -39441589 + MTD LTR MaLR 186 201 -178 7 1073 198 0 0 0 chr15 64053385 64053407 -39441567 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 7 1073 314 306 130 73 chr15 64053407 64053503 -39441471 + MTD LTR MaLR 202 315 -64 7 1073 249 294 47 12 chr15 64054281 64054367 -39440607 + PB1D7 SINE Alu 24 112 -8 7 1073 24 0 0 0 chr15 64055039 64055063 -39439911 + AT_rich Low_complexity Low_complexity 1 24 0 7 1073 312 27 0 0 chr15 64055635 64055672 -39439302 + (GAAAA)n Simple_repeat Simple_repeat 3 39 0 7 1073 255 237 46 14 chr15 64056022 64056099 -39438875 - MIRm SINE MIR -97 165 85 7 1073 198 348 22 0 chr15 64057093 64057185 -39437789 - MIR SINE MIR -154 108 15 8 1073 1019 220 90 18 chr15 64058819 64059182 -39435792 + MTD LTR MaLR 7 396 0 8 1073 300 377 0 0 chr15 64059221 64059335 -39435639 - RSINE1 SINE B4 -4 161 48 8 1073 1269 94 44 0 chr15 64059623 64059804 -39435170 - B2_Mm1t SINE B2 -3 190 2 8 1073 205 156 22 22 chr15 64060887 64060907 -39434067 + T-rich Low_complexity Low_complexity 27 46 0 8 1073 477 0 0 0 chr15 64060907 64060960 -39434014 + (CA)n Simple_repeat Simple_repeat 1 53 0 8 1073 205 156 22 22 chr15 64060960 64060985 -39433989 + T-rich Low_complexity Low_complexity 1 26 0 8 1073 236 179 23 103 chr15 64062661 64062748 -39432226 + MER5B DNA MER1_type 99 178 0 8 1073 307 282 12 0 chr15 64068638 64068723 -39426251 + PB1D10 SINE Alu 1 86 -31 8 1073 23 0 0 0 chr15 64068790 64068813 -39426161 + AT_rich Low_complexity Low_complexity 1 23 0 8 1073 481 246 92 0 chr15 64070023 64070153 -39424821 - B1_Mur1 SINE Alu -3 146 5 9 1073 279 0 0 0 chr15 64071595 64071626 -39423348 + (TA)n Simple_repeat Simple_repeat 1 31 0 9 1073 204 345 36 0 chr15 64072718 64072802 -39422172 - MIRb SINE MIR -65 203 117 9 1073 237 278 82 18 chr15 64073023 64073133 -39421841 - ORR1E LTR MaLR 0 359 243 9 1073 243 0 0 0 chr15 64077344 64077371 -39417603 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 9 1073 360 0 0 0 chr15 64077584 64077624 -39417350 + (GA)n Simple_repeat Simple_repeat 1 40 0 9 1073 1114 153 117 15 chr15 64079303 64079508 -39415466 - URR1A DNA MER1_type 0 226 1 9 1073 2894 62 34 3 chr15 64079643 64080028 -39414946 - L1_Mus3 LINE L1 -1 6637 6241 9 1073 410 307 8 23 chr15 64080100 64080230 -39414744 - RMER30 DNA MER1_type -74 128 1 9 1073 201 384 54 14 chr15 64080482 64080704 -39414270 + L2c LINE L2 3117 3347 -40 9 1073 265 265 50 10 chr15 64081911 64082010 -39412964 + PB1D10 SINE Alu 5 107 -10 1 1073 189 175 0 0 chr15 64082520 64082560 -39412414 + (CACCC)n Simple_repeat Simple_repeat 2 41 0 1 1073 1259 245 147 29 chr15 64084360 64084878 -39410096 + L1MC2 LINE L1 5742 6320 -24 1 1073 264 224 122 0 chr15 64085604 64085702 -39409272 + L2 LINE L2 2950 3059 -360 1 1073 1201 105 53 0 chr15 64086127 64086298 -39408676 + B2_Mm2 SINE B2 1 180 -15 1 1073 189 0 0 0 chr15 64086301 64086322 -39408652 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 1073 405 0 0 0 chr15 64087522 64087567 -39407407 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1073 249 269 0 56 chr15 64088398 64088469 -39406505 - BC1_Mm scRNA scRNA -71 81 15 1 1073 259 217 0 0 chr15 64088598 64088644 -39406330 + B3A SINE B2 1 46 -152 1 1073 290 342 53 0 chr15 64088662 64088738 -39406236 + B3 SINE B2 110 189 -27 1 1073 240 35 0 0 chr15 64088742 64088771 -39406203 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1073 182 171 24 0 chr15 64088790 64088831 -39406143 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 1073 381 176 39 5 chr15 64091008 64091098 -39403876 + PB1D10 SINE Alu 7 95 -22 1 1073 536 164 40 47 chr15 64091100 64091228 -39403746 + B1F1 SINE Alu 13 141 -8 1 1073 400 303 56 37 chr15 64091229 64091390 -39403584 + RSINE1 SINE B4 2 165 0 1 1073 837 209 19 42 chr15 64091593 64091808 -39403166 + RMER1B Other Other 1 210 -856 1 1073 2452 158 9 52 chr15 64091780 64092222 -39402752 + RMER1B Other Other 610 1032 -34 1 1074 1984 137 0 3 chr15 64094389 64094703 -39400271 - ORR1A3 LTR MaLR -8 318 6 1 1074 2878 33 0 0 chr15 64095753 64096090 -39398884 + L1Md_T LINE L1 6246 6582 0 1 1074 1034 45 0 0 chr15 64096113 64096247 -39398727 + B1_Mus1 SINE Alu 6 139 -9 1 1074 352 18 54 18 chr15 64096247 64096303 -39398671 + (CAAAC)n Simple_repeat Simple_repeat 2 59 0 1 1074 530 234 118 31 chr15 64096380 64096609 -39398365 + L1MC5 LINE L1 7609 7857 -104 1 1074 331 224 106 53 chr15 64097065 64097178 -39397796 + RSINE1 SINE B4 12 130 -35 1 1074 259 227 30 0 chr15 64097192 64097258 -39397716 + GA-rich Low_complexity Low_complexity 2 69 0 1 1074 248 266 76 42 chr15 64097258 64097376 -39397598 + MER5A DNA MER1_type 67 188 -1 1 1074 563 168 60 22 chr15 64097971 64098105 -39396869 - B1_Mus2 SINE Alu -7 140 2 1 1074 237 325 26 17 chr15 64099654 64099770 -39395204 - B1F1 SINE Alu -21 128 12 1 1074 263 339 37 0 chr15 64100013 64100122 -39394852 + MLT1J LTR MaLR 24 136 -376 1 1074 439 216 17 0 chr15 64100181 64100297 -39394677 + CT-rich Low_complexity Low_complexity 1 118 0 1 1074 426 241 0 11 chr15 64100297 64100385 -39394589 - PB1D7 SINE Alu -6 114 28 1 1074 360 0 0 0 chr15 64101962 64102002 -39392972 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1074 223 182 0 0 chr15 64102208 64102252 -39392722 + A-rich Low_complexity Low_complexity 1 44 0 1 1074 814 127 90 0 chr15 64102262 64102396 -39392578 + B1_Mus1 SINE Alu 2 147 -1 1 1074 216 0 0 0 chr15 64102417 64102441 -39392533 + (CAGA)n Simple_repeat Simple_repeat 4 27 0 1 1074 322 232 221 0 chr15 64103332 64103427 -39391547 + B3A SINE B2 3 118 -80 1 1074 288 0 0 0 chr15 64103467 64103499 -39391475 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1074 683 164 17 17 chr15 64103864 64103982 -39390992 + PB1D9 SINE Alu 1 118 -2 1 1074 516 278 61 39 chr15 64104975 64105155 -39389819 - B4 SINE B4 -107 185 2 1 1074 720 247 11 48 chr15 64105355 64105542 -39389432 + B3A SINE B2 3 182 -16 1 1074 238 305 53 0 chr15 64105654 64105749 -39389225 + MIRb SINE MIR 152 251 -17 1 1074 537 58 0 0 chr15 64106066 64106135 -39388839 + (GAAA)n Simple_repeat Simple_repeat 2 70 0 1 1074 464 310 47 0 chr15 64106246 64106375 -39388599 + RSINE1 SINE B4 11 145 -20 1 1074 297 0 0 0 chr15 64106382 64106415 -39388559 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1 1074 1159 55 7 0 chr15 64106445 64106591 -39388383 + B1_Mm SINE Alu 1 147 0 1 1074 204 48 23 45 chr15 64106813 64106857 -39388117 + (TTTTTA)n Simple_repeat Simple_repeat 1 43 0 1 1074 1446 42 0 0 chr15 64107169 64107410 -39387564 + (GA)n Simple_repeat Simple_repeat 1 241 0 1 1074 5444 74 5 19 chr15 64108146 64108685 -39386289 - L1_Mus4 LINE L1 -312 6324 5797 1 1074 4677 60 0 3 chr15 64108685 64109272 -39385702 - L1Md_F2 LINE L1 -7 6575 5991 1 1074 5444 74 5 19 chr15 64109272 64109480 -39385494 - L1_Mus4 LINE L1 -840 5796 5587 1 1074 209 333 56 0 chr15 64110417 64110489 -39384485 - MIR SINE MIR -60 148 73 1 1074 185 0 0 39 chr15 64110954 64110980 -39383994 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1 1074 1038 188 14 34 chr15 64112372 64112581 -39382393 + B3 SINE B2 1 205 -11 1 1074 269 312 20 20 chr15 64112624 64112722 -39382252 - MIR SINE MIR -160 102 5 1 1074 1231 48 0 0 chr15 64113787 64113932 -39381042 - B1_Mus1 SINE Alu -3 145 1 1 1074 3071 109 69 2 chr15 64113932 64114406 -39380568 + RLTR11A LTR ERVK 18 523 -5 1 1074 210 278 26 65 chr15 64115624 64115701 -39379273 + MIRm SINE MIR 104 177 -99 1 1074 318 206 0 0 chr15 64116582 64116650 -39378324 + CT-rich Low_complexity Low_complexity 2 69 0 1 1074 451 246 35 43 chr15 64116906 64117077 -39377897 - MTD LTR MaLR -16 403 189 1 1074 471 323 109 42 chr15 64117100 64117339 -39377635 - MTD LTR MaLR -159 260 6 1 1074 3483 181 23 40 chr15 64117473 64118156 -39376818 + RMER1B Other Other 395 1066 0 1 1074 420 229 160 8 chr15 64118180 64118299 -39376675 + B1F SINE Alu 5 141 -8 1 1074 207 98 23 47 chr15 64118981 64119024 -39375950 + A-rich Low_complexity Low_complexity 6 47 0 1 1074 255 31 0 0 chr15 64119026 64119058 -39375916 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 1074 193 100 0 0 chr15 64122876 64122906 -39372068 - L2a LINE L2 -3 3423 3394 1 1074 516 271 42 78 chr15 64123559 64123751 -39371223 + B4 SINE B4 3 187 -105 1 1074 490 263 8 42 chr15 64124063 64124182 -39370792 - RSINE1 SINE B4 -50 115 1 1 1074 249 296 21 54 chr15 64124234 64124327 -39370647 - Charlie1 DNA MER1_type -2553 228 139 1 1074 268 24 49 0 chr15 64124939 64124980 -39369994 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 1074 1210 49 0 0 chr15 64124984 64125126 -39369848 - B1_Mm SINE Alu -5 142 1 1 1074 267 218 55 0 chr15 64125488 64125543 -39369431 - MIR SINE MIR -64 144 87 1 1074 1909 142 105 9 chr15 64126057 64126390 -39368584 + ORR1D1 LTR MaLR 3 367 -7 1 1074 398 257 52 17 chr15 64126418 64126533 -39368441 - RMER15 LTR ERVL -77 498 380 1 1074 690 268 71 5 chr15 64127189 64127399 -39367575 + ID_B1 SINE B4 1 224 0 1 1074 187 279 118 0 chr15 64128200 64128268 -39366706 + MIR3 SINE MIR 132 207 -1 1 1074 181 0 69 0 chr15 64128386 64128415 -39366559 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 1074 309 26 0 0 chr15 64128427 64128465 -39366509 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1074 235 291 101 2 chr15 64129046 64129156 -39365818 + MIRc SINE MIR 35 152 -56 1 1074 305 138 322 0 chr15 64130146 64130233 -39364741 + ID_B1 SINE B4 108 222 -2 1 1074 246 62 0 0 chr15 64130605 64130637 -39364337 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 1 1074 1360 297 76 72 chr15 64132095 64132702 -39362272 + Lx9 LINE L1 6858 7466 -178 1 1074 195 39 0 0 chr15 64132796 64132813 -39362161 + (TA)n Simple_repeat Simple_repeat 1 17 0 1 1074 306 73 0 0 chr15 64132813 64132854 -39362120 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1074 195 39 0 0 chr15 64132854 64132862 -39362112 + (TA)n Simple_repeat Simple_repeat 1 8 0 1 1074 213 39 0 0 chr15 64133599 64133625 -39361349 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 1074 2610 133 131 66 chr15 64136137 64136686 -39358288 + RMER4B LTR ERVK 1 585 0 1 1074 207 114 0 0 chr15 64138919 64138954 -39356020 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1074 1098 212 5 9 chr15 64139041 64139255 -39355719 + B3 SINE B2 4 216 0 1 1074 414 57 0 0 chr15 64139257 64139310 -39355664 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 1074 202 273 167 22 chr15 64140063 64140153 -39354821 + MIRc SINE MIR 76 178 -90 1 1074 207 0 0 0 chr15 64141059 64141082 -39353892 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1074 377 179 94 10 chr15 64141258 64141354 -39353620 - PB1D10 SINE Alu -2 115 12 1 1074 580 244 52 0 chr15 64141380 64141515 -39353459 - B1F2 SINE Alu -6 143 2 1 1074 345 24 0 0 chr15 64141866 64141908 -39353066 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1074 228 100 0 0 chr15 64141910 64141950 -39353024 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1074 688 133 0 32 chr15 64141949 64142135 -39352839 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1074 21 36 0 0 chr15 64144138 64144166 -39350808 + GC_rich Low_complexity Low_complexity 1 28 0 1 1074 185 65 32 0 chr15 64144167 64144198 -39350776 + (CGGAG)n Simple_repeat Simple_repeat 2 33 0 1 1074 333 109 0 0 chr15 64144272 64144327 -39350647 + (CGGGG)n Simple_repeat Simple_repeat 3 57 0 1 1074 24 32 0 0 chr15 64144381 64144412 -39350562 + GC_rich Low_complexity Low_complexity 1 31 0 1 1074 30 27 0 0 chr15 64144486 64144523 -39350451 + GC_rich Low_complexity Low_complexity 1 37 0 1 1074 189 0 0 0 chr15 64144663 64144684 -39350290 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1074 519 213 37 0 chr15 64147960 64148068 -39346906 + RSINE1 SINE B4 11 122 -43 1 1074 926 97 0 7 chr15 64148068 64148213 -39346761 + (CA)n Simple_repeat Simple_repeat 1 144 0 1 1074 229 308 108 25 chr15 64148286 64148406 -39346568 + MIRb SINE MIR 1 130 -138 1 1074 189 74 0 0 chr15 64148407 64148434 -39346540 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1074 1286 27 0 0 chr15 64148524 64148670 -39346304 + B1_Mus2 SINE Alu 2 147 0 2 1074 186 43 0 0 chr15 64150318 64150341 -39344633 + (T)n Simple_repeat Simple_repeat 1 23 0 2 1074 559 179 24 79 chr15 64151213 64151340 -39343634 + PB1D9 SINE Alu 1 120 0 2 1074 213 119 0 0 chr15 64151373 64151415 -39343559 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 2 1074 280 325 82 44 chr15 64151865 64152023 -39342951 + MIRb SINE MIR 52 215 -53 2 1074 478 276 104 79 chr15 64152301 64152580 -39342394 - B4 SINE B4 0 292 7 2 1074 26 0 0 0 chr15 64153194 64153220 -39341754 + AT_rich Low_complexity Low_complexity 1 26 0 2 1074 314 287 85 25 chr15 64153466 64153584 -39341390 - B4 SINE B4 -14 278 154 2 1074 259 140 36 65 chr15 64153846 64154014 -39340960 + (TA)n Simple_repeat Simple_repeat 1 163 0 2 1074 972 279 83 42 chr15 64154015 64154509 -39340465 + L1_Rod LINE L1 5334 5847 0 2 1074 773 291 78 13 chr15 64155695 64155925 -39339049 + MTEa LTR MaLR 1 245 -134 2 1074 378 0 0 0 chr15 64156018 64156060 -39338914 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1074 233 167 250 53 chr15 64156068 64156144 -39338830 + MTEa LTR MaLR 289 379 0 2 1074 342 0 0 0 chr15 64156618 64156656 -39338318 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1074 858 248 19 126 chr15 64156726 64156989 -39337985 + B4A SINE B4 58 292 0 2 1074 549 0 0 0 chr15 64157027 64157088 -39337886 + (GA)n Simple_repeat Simple_repeat 1 61 0 2 1074 217 325 11 11 chr15 64158367 64158454 -39336520 + GA-rich Low_complexity Low_complexity 4 90 0 2 1074 1512 211 94 24 chr15 64158465 64158805 -39336169 - ORR1D1 LTR MaLR 0 374 11 2 1074 474 18 0 0 chr15 64158918 64158973 -39336001 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 2 1074 429 345 17 0 chr15 64159008 64159124 -39335850 + RSINE1 SINE B4 48 165 0 2 1074 240 305 64 37 chr15 64159215 64159324 -39335650 - MIR SINE MIR -46 216 105 2 1074 188 216 20 0 chr15 64159814 64159865 -39335109 + GA-rich Low_complexity Low_complexity 2 53 0 2 1074 339 268 113 21 chr15 64160343 64160484 -39334490 + LTR33 LTR ERVL 361 514 -1 2 1074 191 314 81 11 chr15 64160619 64160706 -39334268 + MIRc SINE MIR 108 200 -68 2 1074 375 121 0 0 chr15 64161414 64161472 -39333502 + (TA)n Simple_repeat Simple_repeat 2 59 0 2 1074 563 324 7 0 chr15 64161749 64161894 -39333080 + B3 SINE B2 48 193 -23 2 1074 2164 153 106 21 chr15 64161894 64162282 -39332692 - MTC LTR MaLR 0 421 1 2 1074 207 0 0 0 chr15 64162296 64162319 -39332655 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 2 1074 180 0 0 0 chr15 64162328 64162348 -39332626 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 1074 681 136 0 0 chr15 64162348 64162488 -39332486 + (GA)n Simple_repeat Simple_repeat 1 140 0 2 1074 430 345 97 38 chr15 64162996 64163315 -39331659 - LTR16C LTR ERVL -10 479 142 2 1074 317 297 174 6 chr15 64163597 64163808 -39331166 - MER33 DNA MER1_type -73 251 9 2 1074 360 268 0 30 chr15 64164156 64164256 -39330718 + L2a LINE L2 3330 3426 0 2 1074 218 313 203 20 chr15 64164912 64165065 -39329909 - MIRb SINE MIR -24 252 72 2 1074 230 240 67 77 chr15 64165769 64165873 -39329101 - LTR77 LTR ERV1 -124 498 396 2 1074 470 353 134 20 chr15 64166661 64166959 -39328015 + MLT1K LTR MaLR 20 351 -244 2 1074 776 209 204 0 chr15 64167302 64167601 -39327373 + MTEa LTR MaLR 20 379 0 2 1074 189 0 0 0 chr15 64168284 64168305 -39326669 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 2 1074 369 0 0 0 chr15 64168310 64168351 -39326623 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1074 916 246 99 67 chr15 64168663 64168946 -39326028 + B4A SINE B4 1 292 0 2 1074 450 0 0 0 chr15 64168967 64169017 -39325957 + (GA)n Simple_repeat Simple_repeat 2 51 0 2 1074 261 213 133 0 chr15 64169307 64169382 -39325592 - MER46C DNA MER2_type -10 328 244 2 1074 182 293 144 36 chr15 64169735 64169928 -39325046 - L2 LINE L2 -1231 2188 1975 2 1074 238 362 91 52 chr15 64169928 64170158 -39324816 + MIR SINE MIR 3 241 -21 2 1074 207 228 105 114 chr15 64170177 64170291 -39324683 - MIR SINE MIR -43 219 107 2 1074 321 89 0 0 chr15 64171193 64171238 -39323736 + (ATG)n Simple_repeat Simple_repeat 1 45 0 2 1074 342 243 28 46 chr15 64171262 64171370 -39323604 - MER3 DNA MER1_type -8 201 96 2 1074 234 372 35 0 chr15 64171588 64171674 -39323300 + L2c LINE L2 3221 3309 -78 2 1074 1627 248 82 32 chr15 64171805 64172123 -39322851 + L1MB3 LINE L1 5451 5794 -389 2 1074 561 15 0 0 chr15 64172123 64172189 -39322785 + (CA)n Simple_repeat Simple_repeat 1 66 0 2 1074 1627 248 82 32 chr15 64172189 64172428 -39322546 + L1MB3 LINE L1 5795 6035 -148 2 1074 278 206 16 16 chr15 64172482 64172546 -39322428 - ID2 SINE ID -19 64 1 2 1074 309 304 54 20 chr15 64172546 64172694 -39322280 + L1MB3 LINE L1 6028 6180 -3 2 1074 308 260 63 82 chr15 64173265 64173424 -39321550 - MIR SINE MIR -2 260 105 2 1074 1007 154 21 52 chr15 64173506 64173698 -39321276 + B2_Mm2 SINE B2 1 186 -9 2 1074 1405 251 15 24 chr15 64173847 64174186 -39320788 + MTEa LTR MaLR 1 336 -43 2 1074 226 232 124 34 chr15 64174840 64174929 -39320045 + MLT1C LTR MaLR 14 110 -357 2 1074 624 261 14 14 chr15 64174922 64175066 -39319908 + ID_B1 SINE B4 81 224 0 2 1074 308 343 160 28 chr15 64175087 64175143 -39319831 + MLT1C LTR MaLR 87 136 -331 2 1074 315 0 0 0 chr15 64175143 64175178 -39319796 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1074 308 343 160 28 chr15 64175178 64175409 -39319565 + MLT1C LTR MaLR 137 411 -56 2 1074 191 286 38 29 chr15 64175467 64175576 -39319398 + L2c LINE L2 3286 3369 -6 2 1074 764 162 189 58 chr15 64175647 64175837 -39319137 - B3 SINE B2 0 216 2 2 1074 268 232 20 0 chr15 64175973 64176072 -39318902 + (CA)n Simple_repeat Simple_repeat 1 101 0 2 1074 384 222 48 64 chr15 64176072 64176197 -39318777 + HAL1-3A_ME LINE L1 1976 2098 -760 2 1074 22 70 0 0 chr15 64176270 64176313 -39318661 + AT_rich Low_complexity Low_complexity 1 43 0 2 1074 320 138 15 0 chr15 64176456 64176521 -39318453 + GA-rich Low_complexity Low_complexity 4 69 0 2 1074 192 40 0 0 chr15 64177686 64177711 -39317263 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 1074 893 272 115 12 chr15 64177728 64177981 -39316993 - B4A SINE B4 -2 290 12 2 1074 222 319 87 17 chr15 64178504 64178619 -39316355 - MIR SINE MIR -123 139 17 2 1074 251 375 0 0 chr15 64178757 64178829 -39316145 + MLT1J LTR MaLR 118 189 -323 2 1074 339 25 0 0 chr15 64179098 64179138 -39315836 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1074 394 313 46 40 chr15 64179185 64179358 -39315616 - B4 SINE B4 -102 190 17 2 1074 474 49 0 0 chr15 64179676 64179737 -39315237 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 1074 476 293 35 14 chr15 64179739 64179881 -39315093 - B4A SINE B4 -9 283 139 2 1074 490 232 21 10 chr15 64179983 64180079 -39314895 - B4A SINE B4 -194 98 2 2 1074 774 242 15 30 chr15 64180882 64181082 -39313892 + ID_B1 SINE B4 2 198 -26 2 1074 509 274 113 0 chr15 64181095 64181219 -39313755 + RSINE1 SINE B4 11 148 -17 2 1074 201 253 207 0 chr15 64181696 64181783 -39313191 + MIRm SINE MIR 60 164 -112 2 1074 1138 68 47 0 chr15 64182473 64182621 -39312353 + B2_Mm2 SINE B2 3 157 -38 2 1074 369 0 0 0 chr15 64182621 64182662 -39312312 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 2 1074 691 320 15 30 chr15 64182762 64182962 -39312012 - B3A SINE B2 -1 197 1 2 1074 2235 279 73 44 chr15 64183110 64183950 -39311024 + RCHARR1 DNA MER1_type 52 973 -1 2 1074 541 238 74 0 chr15 64184024 64184146 -39310828 + RSINE1 SINE B4 35 165 0 2 1074 1271 86 11 0 chr15 64184405 64184580 -39310394 + B2_Mm2 SINE B2 1 177 -18 2 1074 922 268 14 5 chr15 64184644 64184858 -39310116 + ID_B1 SINE B4 2 217 -7 2 1074 903 315 70 98 chr15 64185274 64185929 -39309045 + Lx8 LINE L1 6674 7310 -163 2 1074 522 0 0 0 chr15 64185936 64185994 -39308980 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1074 593 284 101 72 chr15 64186918 64186943 -39308031 + ORR1E LTR MaLR 1 24 -335 2 1074 318 87 0 0 chr15 64186943 64186989 -39307985 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1074 593 284 101 72 chr15 64186989 64187270 -39307704 + ORR1E LTR MaLR 25 316 -43 2 1074 794 256 85 31 chr15 64187719 64188078 -39306896 + MLT2B1 LTR ERVL 4 462 -93 2 1074 192 399 81 12 chr15 64190283 64190443 -39304531 - MIR SINE MIR -21 241 71 2 1074 1080 269 39 88 chr15 64190451 64190892 -39304082 + MTD LTR MaLR 1 419 0 2 1074 474 302 153 36 chr15 64193972 64194168 -39300806 + ID_B1 SINE B4 2 220 -4 2 1074 186 43 0 0 chr15 64194351 64194374 -39300600 + (CGA)n Simple_repeat Simple_repeat 1 23 0 2 1074 537 90 0 0 chr15 64194744 64194833 -39300141 + (TC)n Simple_repeat Simple_repeat 1 89 0 2 1074 207 156 22 22 chr15 64195379 64195425 -39299549 + L2b LINE L2 3104 3149 -226 2 1074 1264 251 72 45 chr15 64195559 64196006 -39298968 + L1MB8 LINE L1 5369 5827 -351 2 1074 264 162 24 2 chr15 64196008 64196066 -39298908 + PB1D10 SINE Alu 66 149 -1 2 1074 595 255 138 22 chr15 64196091 64196360 -39298614 + L1MB8 LINE L1 5820 6099 -75 2 1074 322 297 14 72 chr15 64196572 64196710 -39298264 + MIRc SINE MIR 75 204 -64 2 1074 249 291 116 11 chr15 64196835 64196937 -39298037 + MIRb SINE MIR 39 157 -111 2 1074 457 279 78 0 chr15 64197235 64197389 -39297585 + MLT1J2 LTR MaLR 48 245 -267 2 1074 234 0 0 0 chr15 64198580 64198606 -39296368 + (CTG)n Simple_repeat Simple_repeat 1 26 0 2 1074 658 258 12 29 chr15 64198622 64198794 -39296180 - HAL1-2a_MD LINE L1 -511 2513 2345 2 1074 208 279 134 41 chr15 64198837 64198934 -39296040 - MIRm SINE MIR -126 150 45 2 1074 519 95 0 0 chr15 64199001 64199075 -39295899 + (CA)n Simple_repeat Simple_repeat 2 75 0 3 1074 222 165 256 12 chr15 64199336 64199422 -39295552 + PB1D10 SINE Alu 10 116 -1 3 1074 180 280 172 67 chr15 64199843 64199977 -39294997 - L2b LINE L2 -4 3371 3224 3 1074 200 339 0 0 chr15 64200374 64200439 -39294535 + (CAT)n Simple_repeat Simple_repeat 3 67 0 3 1074 469 318 29 17 chr15 64200452 64200625 -39294349 + HAL1-2a_MD LINE L1 2345 2519 -505 3 1074 437 274 106 86 chr15 64200629 64200885 -39294089 - MLT1B LTR MaLR -2 465 205 3 1074 1617 238 49 5 chr15 64200941 64201308 -39293666 - MTD LTR MaLR 0 419 37 3 1074 806 84 17 0 chr15 64201324 64201443 -39293531 + (GAAA)n Simple_repeat Simple_repeat 2 122 0 3 1074 372 165 11 21 chr15 64201448 64201541 -39293433 + GA-rich Low_complexity Low_complexity 3 94 0 3 1074 453 258 53 23 chr15 64201555 64201686 -39293288 - MLT1B LTR MaLR -255 135 1 3 1074 253 338 88 42 chr15 64201739 64201955 -39293019 - MIRb SINE MIR -35 233 8 3 1074 207 0 0 0 chr15 64202740 64202763 -39292211 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1074 198 268 108 12 chr15 64202923 64203006 -39291968 + L2c LINE L2 3277 3367 -20 3 1074 507 282 0 0 chr15 64203335 64203445 -39291529 - PB1D9 SINE Alu -8 112 3 3 1074 661 267 99 0 chr15 64203625 64203797 -39291177 - ID_B1 SINE B4 -34 190 2 3 1074 318 227 139 43 chr15 64203797 64203902 -39291072 - MLT1L LTR MaLR -320 290 175 3 1074 1147 272 72 10 chr15 64204133 64204438 -39290536 + MTEa LTR MaLR 54 377 -2 3 1074 189 300 86 0 chr15 64205814 64205884 -39289090 + MIRb SINE MIR 52 127 -141 3 1074 189 0 0 0 chr15 64206642 64206663 -39288311 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 3 1074 524 265 144 0 chr15 64206664 64206845 -39288129 - ID_B1 SINE B4 -16 208 2 3 1074 288 0 0 0 chr15 64206882 64206914 -39288060 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1074 1195 139 81 5 chr15 64207114 64207324 -39287650 - URR1A DNA MER1_type 0 226 1 3 1074 417 39 0 0 chr15 64208260 64208311 -39286663 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1074 516 261 91 78 chr15 64209540 64209694 -39285280 + ID_B1 SINE B4 6 161 -63 3 1074 476 239 228 5 chr15 64209851 64210040 -39284934 + MLT1D LTR MaLR 275 505 0 3 1074 236 328 77 39 chr15 64210242 64210372 -39284602 - L2c LINE L2 -202 3185 3051 3 1074 266 390 29 55 chr15 64211052 64211399 -39283575 + L2b LINE L2 3038 3375 0 3 1074 266 259 81 12 chr15 64211451 64211537 -39283437 + L2c LINE L2 3295 3386 -1 3 1074 405 0 0 0 chr15 64211627 64211672 -39283302 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1074 602 304 77 0 chr15 64211745 64211939 -39283035 - B4A SINE B4 -80 212 4 3 1074 387 105 0 0 chr15 64212736 64212793 -39282181 + (TTTC)n Simple_repeat Simple_repeat 3 59 0 3 1074 22 35 0 0 chr15 64214140 64214169 -39280805 + GC_rich Low_complexity Low_complexity 1 29 0 3 1074 200 214 18 18 chr15 64214314 64214371 -39280603 + (CGGGG)n Simple_repeat Simple_repeat 2 58 0 3 1074 222 37 0 0 chr15 64214436 64214463 -39280511 + (CGG)n Simple_repeat Simple_repeat 1 27 0 3 1074 201 324 139 23 chr15 64215818 64216033 -39278941 + L2a LINE L2 3179 3418 -8 3 1074 593 208 102 16 chr15 64216315 64216442 -39278532 + ID_B1 SINE B4 86 223 -1 3 1074 189 0 0 0 chr15 64216492 64216513 -39278461 + (GGGAA)n Simple_repeat Simple_repeat 3 23 0 3 1074 268 331 72 0 chr15 64216638 64216777 -39278197 + LTR16E2 LTR ERVL 420 568 0 3 1074 387 246 110 34 chr15 64216928 64217046 -39277928 - MIR SINE MIR -66 142 16 3 1074 445 354 78 16 chr15 64217121 64217365 -39277609 - L2 LINE L2 -1289 2130 1872 3 1074 189 107 0 0 chr15 64217855 64217883 -39277091 + (GGA)n Simple_repeat Simple_repeat 2 29 0 3 1074 495 344 66 0 chr15 64218161 64218344 -39276630 - MER20 DNA MER1_type -9 210 16 3 1074 1006 230 124 8 chr15 64218419 64218617 -39276357 + B4A SINE B4 1 227 -65 3 1074 220 27 0 51 chr15 64218617 64218656 -39276318 + (TAA)n Simple_repeat Simple_repeat 1 37 0 3 1074 1006 230 124 8 chr15 64218656 64218698 -39276276 + B4A SINE B4 228 269 -23 3 1074 207 0 0 0 chr15 64218700 64218723 -39276251 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1074 557 266 0 9 chr15 64218753 64218867 -39276107 + PB1D10 SINE Alu 3 115 -2 3 1074 581 242 61 0 chr15 64218870 64219002 -39275972 + ID_B1 SINE B4 77 216 -8 3 1074 252 86 0 0 chr15 64219025 64219060 -39275914 + (A)n Simple_repeat Simple_repeat 1 35 0 3 1074 335 255 76 82 chr15 64219589 64219760 -39275214 - MIR SINE MIR -3 259 90 3 1074 812 296 44 8 chr15 64219802 64220051 -39274923 - MTE2b LTR MaLR -45 334 77 3 1074 348 265 69 30 chr15 64220164 64220265 -39274709 + PB1D9 SINE Alu 9 113 -7 3 1074 1520 228 65 69 chr15 64220263 64220668 -39274306 - RMER19B LTR ERVK -420 482 1 3 1074 1177 244 99 48 chr15 64220668 64221018 -39273956 + MTE2b LTR MaLR 12 379 0 3 1074 251 340 140 25 chr15 64221389 64221546 -39273428 + MIR SINE MIR 13 187 -75 3 1074 392 281 53 0 chr15 64221546 64221660 -39273314 - ID_B1 SINE B4 -17 207 88 3 1074 593 90 11 0 chr15 64221864 64221953 -39273021 + (TC)n Simple_repeat Simple_repeat 1 90 0 3 1074 809 249 66 6 chr15 64221984 64222166 -39272808 - ID_B1 SINE B4 -31 193 1 3 1074 296 127 0 137 chr15 64222169 64222242 -39272732 + MLT1A1 LTR MaLR 346 408 0 3 1074 690 114 20 54 chr15 64222459 64222607 -39272367 + BC1_Mm scRNA scRNA 2 144 -8 3 1074 252 143 0 0 chr15 64222658 64222700 -39272274 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1074 203 254 0 17 chr15 64223383 64223443 -39271531 + (ATGGTG)n Simple_repeat Simple_repeat 6 64 0 3 1074 670 254 88 0 chr15 64223763 64223956 -39271018 - B3 SINE B2 -5 211 2 3 1074 409 253 43 10 chr15 64224012 64224120 -39270854 + PB1D7 SINE Alu 11 118 -2 3 1074 941 212 18 27 chr15 64224819 64225063 -39269911 + ORR1D2 LTR MaLR 159 370 0 3 1075 219 358 0 0 chr15 64225315 64225382 -39269592 + ID4_ SINE ID 16 82 -1 3 1075 591 15 0 0 chr15 64226079 64226147 -39268827 + (TCCC)n Simple_repeat Simple_repeat 1 68 0 3 1075 931 142 7 7 chr15 64226298 64226447 -39268527 + B1_Mur4 SINE Alu 2 150 0 3 1075 225 94 0 0 chr15 64226452 64226484 -39268490 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 3 1075 608 269 185 13 chr15 64226701 64227014 -39267960 + L1MB3 LINE L1 5745 6111 -72 3 1075 233 141 45 45 chr15 64227037 64227104 -39267870 + Lx5 LINE L1 6984 7050 0 3 1075 222 254 45 0 chr15 64227564 64227631 -39267343 - L3 LINE CR1 -466 4023 3954 3 1075 2852 239 78 48 chr15 64228265 64229744 -39265230 - RMER1B Other Other -1 1065 27 3 1075 369 250 0 0 chr15 64230092 64230176 -39264798 - ID_B1 SINE B4 -58 166 83 3 1075 335 242 33 11 chr15 64230305 64230397 -39264577 + L1MB3 LINE L1 5947 6040 -143 3 1075 630 248 7 0 chr15 64230604 64230753 -39264221 + L1MB3 LINE L1 6033 6182 -1 3 1075 259 300 49 107 chr15 64230788 64231012 -39263962 + L2a LINE L2 3214 3424 -2 3 1075 686 185 262 12 chr15 64231232 64231396 -39263578 - B3 SINE B2 -10 206 2 3 1075 493 341 95 40 chr15 64231476 64231876 -39263098 - L1M5 LINE L1 -3600 2546 2125 3 1075 345 24 0 0 chr15 64232388 64232430 -39262544 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1075 333 318 71 91 chr15 64232609 64232645 -39262329 + MER113 DNA MER1_type 88 123 -398 3 1075 261 0 0 0 chr15 64232645 64232674 -39262300 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1075 832 266 9 0 chr15 64232674 64232888 -39262086 - ID_B1 SINE B4 -8 216 1 3 1075 333 318 71 91 chr15 64232888 64233189 -39261785 + MER113 DNA MER1_type 124 418 -103 3 1075 401 0 0 20 chr15 64233332 64233382 -39261592 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 1075 351 198 62 0 chr15 64233980 64234061 -39260913 + L1ME3 LINE L1 5895 5980 -182 3 1075 477 0 0 0 chr15 64234146 64234199 -39260775 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1075 210 158 0 26 chr15 64234222 64234261 -39260713 + CT-rich Low_complexity Low_complexity 4 41 0 3 1075 654 253 109 10 chr15 64234272 64234464 -39260510 - ID_B1 SINE B4 -12 212 2 3 1075 188 0 0 69 chr15 64235345 64235374 -39259600 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 3 1075 231 272 9 132 chr15 64236179 64236201 -39258773 - ID_B1 SINE B4 -128 96 4 3 1075 311 250 0 48 chr15 64236201 64236285 -39258689 - ID4_ SINE ID 0 83 4 3 1075 430 250 65 79 chr15 64236463 64236602 -39258372 + RSINE1 SINE B4 8 144 -21 3 1075 384 40 0 0 chr15 64236609 64236659 -39258315 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 3 1075 228 352 48 0 chr15 64236829 64236934 -39258040 + B1F2 SINE Alu 35 144 -5 3 1075 297 162 0 0 chr15 64236934 64237002 -39257972 + GA-rich Low_complexity Low_complexity 1 68 0 3 1075 238 355 85 39 chr15 64237022 64237327 -39257647 - LTR79 LTR ERVL -31 496 178 3 1075 2268 156 57 12 chr15 64237343 64237386 -39257588 - MTC LTR MaLR 0 421 379 3 1075 659 24 0 23 chr15 64237386 64237472 -39257502 + (GAAA)n Simple_repeat Simple_repeat 2 85 0 3 1075 2268 156 57 12 chr15 64237472 64237831 -39257143 - MTC LTR MaLR -43 378 3 3 1075 1474 249 90 0 chr15 64239145 64239490 -39255484 - MTE2b LTR MaLR -3 376 1 3 1075 1261 40 0 0 chr15 64239554 64239702 -39255272 + B1_Mus1 SINE Alu 1 148 0 3 1075 249 108 0 0 chr15 64239703 64239740 -39255234 + (A)n Simple_repeat Simple_repeat 1 37 0 3 1075 1699 178 207 12 chr15 64240173 64240578 -39254396 + Lx4B LINE L1 6553 7036 -22 3 1075 261 0 0 0 chr15 64240578 64240607 -39254367 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 3 1075 216 350 69 10 chr15 64240874 64240975 -39253999 - L2c LINE L2 -41 3346 3216 4 1075 952 257 83 19 chr15 64241174 64241500 -39253474 + MTD LTR MaLR 47 406 -1 4 1075 991 269 42 4 chr15 64241503 64241764 -39253210 + ORR1D2 LTR MaLR 5 275 -95 4 1075 1483 213 45 47 chr15 64242233 64242421 -39252553 + ORR1C2 LTR MaLR 1 175 -209 4 1075 513 0 0 0 chr15 64242421 64242478 -39252496 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 1075 1483 213 45 47 chr15 64242478 64242669 -39252305 + ORR1C2 LTR MaLR 176 379 -5 4 1075 375 145 0 0 chr15 64243136 64243205 -39251769 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 1075 234 370 58 26 chr15 64244889 64245078 -39249896 - L2c LINE L2 -163 3224 3030 4 1075 2464 95 3 0 chr15 64245923 64246248 -39248726 + ORR1A2 LTR MaLR 2 327 0 4 1075 244 265 141 22 chr15 64246250 64246385 -39248589 + MIRb SINE MIR 56 206 -62 4 1075 356 59 20 0 chr15 64247241 64247292 -39247682 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 1075 378 0 0 0 chr15 64247292 64247333 -39247641 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 1075 235 259 57 34 chr15 64248214 64248302 -39246672 + MTEb LTR MaLR 260 349 -30 4 1075 576 247 111 12 chr15 64248347 64248519 -39246455 - ID_B1 SINE B4 -33 191 3 4 1075 361 157 57 0 chr15 64248760 64248830 -39246144 + HAL1-3A_ME LINE L1 1961 2034 -824 4 1075 324 0 0 0 chr15 64248844 64248880 -39246094 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1075 459 0 0 0 chr15 64248880 64248931 -39246043 + (GA)n Simple_repeat Simple_repeat 2 52 0 4 1075 365 312 74 101 chr15 64249103 64249184 -39245790 + ORR1E LTR MaLR 1 68 -291 4 1075 195 42 0 0 chr15 64249184 64249208 -39245766 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1075 762 181 14 0 chr15 64249208 64249346 -39245628 - B1_Mur4 SINE Alu -10 140 1 4 1075 365 312 74 101 chr15 64249346 64249630 -39245344 + ORR1E LTR MaLR 69 356 -3 4 1075 293 236 65 33 chr15 64249782 64249874 -39245100 - MIR SINE MIR -159 103 9 4 1075 256 298 31 47 chr15 64249921 64250048 -39244926 - L2b LINE L2 -16 3359 3235 4 1075 2711 38 28 0 chr15 64250113 64250431 -39244543 - IAPLTR2b LTR ERVK 0 327 1 4 1075 210 260 0 0 chr15 64251596 64251646 -39243328 - B1F1 SINE Alu -98 51 2 4 1075 448 300 25 0 chr15 64252265 64252385 -39242589 + B1F1 SINE Alu 5 127 -22 4 1075 273 262 10 125 chr15 64252351 64252447 -39242527 + B1_Mur1 SINE Alu 65 149 0 4 1075 237 258 26 64 chr15 64252617 64252782 -39242192 + MIRm SINE MIR 52 202 -66 4 1075 724 30 10 10 chr15 64253836 64253936 -39241038 + (TCCC)n Simple_repeat Simple_repeat 4 103 0 4 1075 855 0 0 0 chr15 64254564 64254659 -39240315 + (TTC)n Simple_repeat Simple_repeat 1 95 0 4 1075 900 35 0 0 chr15 64254661 64254774 -39240200 - B1_Mus2 SINE Alu -12 135 23 4 1075 414 0 0 0 chr15 64255580 64255626 -39239348 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1075 191 119 0 67 chr15 64255626 64255671 -39239303 + G-rich Low_complexity Low_complexity 2 43 0 4 1075 21 36 0 0 chr15 64255926 64255954 -39239020 + AT_rich Low_complexity Low_complexity 1 28 0 4 1075 253 283 0 0 chr15 64256030 64256083 -39238891 + ID2 SINE ID 15 67 -16 4 1075 231 281 15 45 chr15 64256083 64256097 -39238877 + ID SINE ID 15 79 -145 4 1075 935 211 159 38 chr15 64256750 64257115 -39237859 - RLTR9E LTR ERVK 0 409 1 4 1075 2935 52 11 3 chr15 64257362 64257732 -39237242 - L1_Mus1 LINE L1 -528 6038 5666 4 1075 3931 78 0 2 chr15 64257733 64258236 -39236738 + L1_Mus1 LINE L1 6065 6566 -1 4 1075 322 309 0 10 chr15 64258306 64258404 -39236570 - ID_B1 SINE B4 -1 223 127 4 1075 1533 204 95 6 chr15 64259131 64259447 -39235527 + RMER1B Other Other 31 374 -692 4 1075 965 113 129 40 chr15 64259459 64259661 -39235313 - RMER4A LTR ERVK -246 220 1 4 1075 195 137 13 64 chr15 64260334 64260412 -39234562 + CT-rich Low_complexity Low_complexity 4 77 0 4 1075 333 164 0 0 chr15 64261935 64261981 -39232993 - ORR1B2 LTR MaLR 0 367 322 4 1075 1573 127 18 108 chr15 64261981 64262369 -39232605 - RMER17C LTR ERVK 0 410 58 4 1075 1471 161 93 7 chr15 64262365 64262665 -39232309 - ORR1B2 LTR MaLR -41 326 1 4 1075 439 285 45 20 chr15 64264198 64264468 -39230506 - L1MA4A LINE L1 -309 5988 5673 4 1075 405 281 0 16 chr15 64264452 64264601 -39230373 - Lx7 LINE L1 -345 7128 6982 4 1075 328 256 162 17 chr15 64264591 64264770 -39230204 + Lx8 LINE L1 7260 7464 -9 4 1075 309 321 167 10 chr15 64264990 64265182 -39229792 - RMER15 LTR ERVL -58 517 296 4 1075 271 295 60 73 chr15 64265524 64265811 -39229163 - L2b LINE L2 -38 3349 3082 4 1075 405 0 0 0 chr15 64266107 64266152 -39228822 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1075 283 273 0 22 chr15 64266788 64266878 -39228096 + L2 LINE L2 2570 2657 -762 4 1075 384 332 47 39 chr15 64267134 64267391 -39227583 + Arthur1 DNA Tip100 152 410 -3537 4 1075 351 297 27 139 chr15 64267494 64267752 -39227222 + MTEa LTR MaLR 149 377 -2 4 1075 206 83 56 0 chr15 64267960 64267996 -39226978 + (TATATG)n Simple_repeat Simple_repeat 1 38 0 4 1075 24 32 0 0 chr15 64268040 64268071 -39226903 + AT_rich Low_complexity Low_complexity 1 31 0 4 1075 295 176 20 0 chr15 64268247 64268298 -39226676 - B3 SINE B2 -125 91 40 4 1075 208 396 33 20 chr15 64268857 64269009 -39225965 + L2b LINE L2 3215 3368 -7 4 1075 350 336 70 57 chr15 64269441 64269668 -39225306 + Lx8 LINE L1 7147 7376 -97 4 1075 796 278 5 28 chr15 64269883 64270101 -39224873 - B3 SINE B2 0 216 4 4 1075 2257 79 135 14 chr15 64270435 64270783 -39224191 + RLTR10 LTR ERVK 1 390 0 4 1075 2536 87 12 0 chr15 64270966 64271289 -39223685 - ORR1A2 LTR MaLR 0 327 1 4 1075 363 310 30 11 chr15 64271369 64271598 -39223376 + L1_Mur2 LINE L1 1487 1828 -4049 4 1075 611 248 18 43 chr15 64271628 64271792 -39223182 + RSINE1 SINE B4 4 163 -2 4 1075 305 311 31 82 chr15 64271822 64272018 -39222956 + L1MEg LINE L1 1727 1912 -4503 4 1075 23 0 0 0 chr15 64272173 64272196 -39222778 + AT_rich Low_complexity Low_complexity 1 23 0 4 1075 1184 43 0 0 chr15 64272202 64272340 -39222634 + B1_Mus1 SINE Alu 3 140 -8 4 1075 348 24 0 0 chr15 64272355 64272396 -39222578 + (A)n Simple_repeat Simple_repeat 1 41 0 4 1075 251 276 26 0 chr15 64272411 64272487 -39222487 + L1MEg LINE L1 2386 2463 -3937 4 1075 562 314 88 76 chr15 64272568 64272780 -39222194 + Lx7 LINE L1 2809 3031 -3112 4 1075 307 312 165 25 chr15 64272780 64272938 -39222036 + B3A SINE B2 1 180 -18 4 1075 342 0 0 0 chr15 64272946 64272984 -39221990 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1075 562 314 88 76 chr15 64272984 64273277 -39221697 + Lx7 LINE L1 3032 3337 -2806 4 1075 2290 148 19 60 chr15 64273277 64273695 -39221279 - MTB_Mm LTR MaLR -4 403 3 4 1075 562 314 88 76 chr15 64273695 64273838 -39221136 + Lx7 LINE L1 3338 3475 -2668 4 1075 825 205 52 16 chr15 64273850 64274043 -39220931 - ORR1D1 LTR MaLR -8 366 167 4 1075 234 238 0 0 chr15 64274045 64274087 -39220887 + polypurine Low_complexity Low_complexity 6 47 0 4 1075 679 193 30 116 chr15 64274087 64274286 -39220688 - ORR1D1 LTR MaLR -192 182 1 4 1075 1463 269 64 26 chr15 64274302 64274854 -39220120 + Lx7 LINE L1 5029 5229 -651 4 1075 2566 77 3 0 chr15 64274854 64275180 -39219794 + ORR1A2 LTR MaLR 1 327 0 4 1075 1463 325 31 29 chr15 64275180 64275852 -39219122 + Lx7 LINE L1 5230 5899 -1797 4 1075 333 0 0 0 chr15 64275873 64275910 -39219064 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1075 203 218 75 75 chr15 64276187 64276281 -39218693 + MIR SINE MIR 109 202 -60 4 1075 370 163 61 10 chr15 64276505 64276604 -39218370 + RMER17C LTR ERVK 307 410 0 4 1075 401 335 19 19 chr15 64276604 64276765 -39218209 - ID_B1 SINE B4 -60 164 4 4 1075 192 217 0 0 chr15 64277541 64277587 -39217387 + (TTCA)n Simple_repeat Simple_repeat 4 49 0 4 1075 193 274 48 0 chr15 64278238 64278300 -39216674 - L3b LINE CR1 -125 357 293 4 1075 282 275 138 0 chr15 64278637 64278746 -39216228 + MIR SINE MIR 13 136 -126 4 1075 1486 194 116 79 chr15 64278762 64279166 -39215808 + MTD LTR MaLR 1 419 0 4 1075 370 325 0 17 chr15 64279354 64279473 -39215501 - PB1D10 SINE Alu 0 117 1 4 1075 386 296 34 48 chr15 64280413 64280619 -39214355 - MIRb SINE MIR -23 245 43 4 1075 373 14 0 101 chr15 64280839 64280918 -39214056 + (TTTTTG)n Simple_repeat Simple_repeat 2 72 0 4 1075 38754 13 0 7 chr15 64281152 64286340 -39208634 + L1Md_A LINE L1 440 5586 -297 4 1075 9388 14 0 0 chr15 64286340 64287335 -39207639 + L1Md_A LINE L1 5587 6581 -1 4 1075 1567 223 43 27 chr15 64287436 64287809 -39207165 + MTE2a LTR MaLR 1 379 0 4 1075 23 0 0 0 chr15 64287818 64287841 -39207133 + AT_rich Low_complexity Low_complexity 1 23 0 4 1075 228 217 22 0 chr15 64288204 64288250 -39206724 - PB1 SINE Alu -15 112 66 4 1075 265 311 55 11 chr15 64288321 64288412 -39206562 + MLT1A0 LTR MaLR 89 183 -182 4 1075 1059 243 42 31 chr15 64288427 64288716 -39206258 - Lx9 LINE L1 -642 7002 6711 4 1075 852 317 123 6 chr15 64288722 64289055 -39205919 + Lx9 LINE L1 7061 7432 -212 4 1075 43 20 0 0 chr15 64289227 64289277 -39205697 + AT_rich Low_complexity Low_complexity 1 50 0 4 1075 353 310 61 37 chr15 64289376 64289540 -39205434 + MLT1A0 LTR MaLR 139 306 -59 4 1075 22 0 0 0 chr15 64289820 64289842 -39205132 + AT_rich Low_complexity Low_complexity 1 22 0 4 1075 406 295 97 44 chr15 64290152 64290379 -39204595 + MLT1C LTR MaLR 34 272 -195 4 1075 1052 241 75 113 chr15 64290453 64290959 -39204015 - RLTR12B LTR ERVK -31 497 11 4 1075 577 286 64 80 chr15 64291316 64291579 -39203395 - L1MB5 LINE L1 -37 6137 5877 4 1075 777 101 235 0 chr15 64291579 64291698 -39203276 + B1_Mus1 SINE Alu 2 148 0 4 1075 577 286 64 80 chr15 64291698 64291761 -39203213 - L1MB5 LINE L1 -298 5876 5816 4 1075 1163 259 119 78 chr15 64291769 64292406 -39202568 - L1MB2 LINE L1 -4 6167 5505 4 1075 25 31 0 0 chr15 64292414 64292446 -39202528 + AT_rich Low_complexity Low_complexity 1 32 0 4 1075 338 264 92 0 chr15 64292493 64292580 -39202394 - RSINE1 SINE B4 -6 159 65 4 1075 293 313 106 24 chr15 64292585 64292755 -39202219 - L1MB5 LINE L1 -1222 4924 4741 4 1075 187 342 12 25 chr15 64292833 64292914 -39202060 + L2 LINE L2 2793 2872 -547 4 1075 375 108 31 31 chr15 64293548 64293644 -39201330 + GA-rich Low_complexity Low_complexity 2 97 0 5 1075 1165 101 6 12 chr15 64293661 64293832 -39201142 + B2_Mm1t SINE B2 2 171 -22 5 1075 304 187 0 21 chr15 64293874 64293940 -39201034 + B2_Mm2 SINE B2 47 109 -107 5 1075 309 51 0 0 chr15 64293955 64293994 -39200980 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1075 486 0 0 0 chr15 64294008 64294062 -39200912 + (GGAGA)n Simple_repeat Simple_repeat 3 56 0 5 1075 5017 57 17 3 chr15 64294542 64295138 -39199836 - L1_Mus1 LINE L1 0 6567 5964 5 1075 1501 229 89 8 chr15 64296042 64296425 -39198549 + MTD LTR MaLR 6 419 0 5 1075 389 200 0 54 chr15 64296564 64296638 -39198336 - RMER30 DNA MER1_type 0 202 133 5 1075 1418 201 146 36 chr15 64296648 64296983 -39197991 + ORR1D1 LTR MaLR 1 372 -2 5 1075 229 182 49 45 chr15 64297100 64297173 -39197801 + MIR SINE MIR 96 177 -99 5 1075 510 276 112 0 chr15 64297670 64297840 -39197134 - L1MC2 LINE L1 -13 6331 6143 5 1075 717 272 51 59 chr15 64297853 64298170 -39196804 - ORR1E LTR MaLR -7 372 36 5 1075 195 179 0 25 chr15 64298763 64298803 -39196171 + L2 LINE L2 891 929 -2490 5 1075 529 324 31 9 chr15 64298977 64299201 -39195773 + L1M3 LINE L1 5513 5741 -442 5 1075 1253 243 54 46 chr15 64299226 64299633 -39195341 + MTE2a LTR MaLR 1 417 -2 5 1075 277 240 75 19 chr15 64299633 64299739 -39195235 + L1M3 LINE L1 5760 5871 -312 5 1075 559 262 77 30 chr15 64300838 64301021 -39193953 - B3 SINE B2 -6 210 25 5 1075 226 233 0 0 chr15 64301312 64301355 -39193619 + MTD LTR MaLR 136 178 -241 5 1075 374 198 82 36 chr15 64301357 64301467 -39193507 + Lx9 LINE L1 7515 7629 -15 5 1075 710 146 223 33 chr15 64301473 64301544 -39193430 + MTD LTR MaLR 196 270 -149 5 1075 2518 60 96 72 chr15 64301544 64301918 -39193056 + RLTR9A2 LTR ERVK 1 383 0 5 1075 710 146 223 33 chr15 64301918 64302030 -39192944 + MTD LTR MaLR 271 414 -5 5 1075 233 326 12 0 chr15 64302174 64302260 -39192714 - L1MC LINE L1 -1174 4972 4886 5 1075 235 365 28 28 chr15 64303329 64303470 -39191504 + Lx8 LINE L1 7034 7174 -299 5 1075 2435 193 145 15 chr15 64305475 64306007 -39188967 + MT2B LTR ERVL 1 601 0 5 1075 986 285 76 37 chr15 64306085 64306467 -39188507 - MLT1F1-int LTR MaLR -914 575 179 5 1075 568 254 204 4 chr15 64306542 64306784 -39188190 - B4A SINE B4 0 292 2 5 1075 232 268 42 0 chr15 64306826 64306897 -39188077 - MLT1F1-int LTR MaLR -1415 74 1 5 1075 720 275 143 82 chr15 64306920 64307327 -39187647 - MLT1F1 LTR MaLR -46 523 92 5 1075 335 274 71 0 chr15 64307327 64307411 -39187563 + B1F SINE Alu 3 92 -57 5 1075 228 150 38 0 chr15 64307412 64307492 -39187482 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 5 1075 227 315 0 52 chr15 64307564 64307641 -39187333 + ID_B1 SINE B4 114 186 -38 5 1075 283 317 29 38 chr15 64307669 64307774 -39187200 - MLT1F1 LTR MaLR -452 108 5 5 1075 5001 54 8 8 chr15 64307822 64308417 -39186557 - L1Md_F2 LINE L1 -3 6579 5985 5 1075 258 337 0 22 chr15 64308435 64308526 -39186448 - L2a LINE L2 -25 3401 3313 5 1075 1178 283 17 48 chr15 64308791 64309210 -39185764 + L1MB8 LINE L1 5767 6172 -6 5 1075 805 237 22 28 chr15 64309228 64309309 -39185665 + ID SINE ID 5 84 -140 5 1075 434 257 9 52 chr15 64309309 64309424 -39185550 + PB1D10 SINE Alu 3 112 -5 5 1075 519 289 87 68 chr15 64309759 64309978 -39184996 + B4A SINE B4 70 292 0 5 1075 188 314 161 62 chr15 64310082 64310194 -39184780 - L2a LINE L2 -17 3409 3287 5 1075 306 271 136 62 chr15 64310673 64310850 -39184124 - MLT1A1 LTR MaLR -195 213 24 5 1075 283 289 119 19 chr15 64310895 64311054 -39183920 + MIRb SINE MIR 67 241 -27 5 1075 22 0 0 0 chr15 64311522 64311544 -39183430 + AT_rich Low_complexity Low_complexity 1 22 0 5 1075 867 136 35 105 chr15 64311559 64311731 -39183243 + B2_Mm2 SINE B2 2 161 -34 5 1075 183 80 0 0 chr15 64311731 64311756 -39183218 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 5 1075 452 330 56 0 chr15 64311983 64312162 -39182812 + MIRb SINE MIR 47 235 -33 5 1075 210 267 48 29 chr15 64312970 64313074 -39181900 + MIRb SINE MIR 41 146 -122 5 1075 557 162 9 0 chr15 64313191 64313302 -39181672 + CT-rich Low_complexity Low_complexity 2 113 0 5 1075 226 354 90 0 chr15 64313392 64313536 -39181438 + MLT1B LTR MaLR 6 162 -212 5 1075 205 167 0 0 chr15 64313548 64313584 -39181390 + GA-rich Low_complexity Low_complexity 3 38 0 5 1075 306 331 172 0 chr15 64313599 64313768 -39181206 + MLT1B LTR MaLR 189 386 -4 5 1075 425 19 19 0 chr15 64315413 64315467 -39179507 + (CTATA)n Simple_repeat Simple_repeat 2 56 0 5 1075 619 311 131 56 chr15 64316005 64316342 -39178632 - MLT1E1A LTR MaLR -8 672 311 5 1075 279 299 105 31 chr15 64316517 64316679 -39178295 + MIRc SINE MIR 30 203 -65 5 1075 733 279 0 0 chr15 64317303 64317450 -39177524 - RSINE1 SINE B4 -17 148 2 5 1075 180 0 0 0 chr15 64317465 64317485 -39177489 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1075 1127 76 7 14 chr15 64317667 64317806 -39177168 + B1_Mus1 SINE Alu 1 139 -9 5 1075 522 0 0 0 chr15 64317806 64317864 -39177110 + (CAAAC)n Simple_repeat Simple_repeat 2 59 0 5 1075 369 0 0 0 chr15 64318283 64318324 -39176650 + (TAA)n Simple_repeat Simple_repeat 2 42 0 5 1075 27 49 0 0 chr15 64318388 64318429 -39176545 + AT_rich Low_complexity Low_complexity 1 41 0 5 1075 239 311 0 0 chr15 64318429 64318490 -39176484 + ID_B1 SINE B4 81 141 -83 5 1075 226 313 0 43 chr15 64318442 64318512 -39176462 + B1F SINE Alu 13 79 -70 5 1075 236 278 0 0 chr15 64318855 64318909 -39176065 + PB1D10 SINE Alu 59 112 -5 5 1075 686 244 18 30 chr15 64319040 64319205 -39175769 - RSINE1 SINE B4 -1 164 2 5 1075 591 180 6 40 chr15 64319248 64319422 -39175552 + C-rich Low_complexity Low_complexity 2 169 0 5 1075 754 303 35 21 chr15 64319433 64319688 -39175286 - B4A SINE B4 -21 271 1 5 1075 216 105 34 34 chr15 64319748 64319807 -39175167 + (TTA)n Simple_repeat Simple_repeat 2 60 0 5 1075 244 212 25 12 chr15 64319841 64319922 -39175052 + A-rich Low_complexity Low_complexity 4 85 0 5 1075 305 170 34 11 chr15 64319922 64320011 -39174963 + (TA)n Simple_repeat Simple_repeat 1 91 0 5 1075 42 36 0 0 chr15 64320020 64320076 -39174898 + AT_rich Low_complexity Low_complexity 1 56 0 5 1075 984 170 200 11 chr15 64320946 64321136 -39173838 + URR1A DNA MER1_type 1 226 0 5 1075 3641 161 59 5 chr15 64321456 64322097 -39172877 - RLTR17 LTR ERVK -16 676 1 5 1075 459 240 77 4 chr15 64322141 64322308 -39172666 - L1MA4 LINE L1 -192 5964 5789 5 1075 380 62 0 90 chr15 64322311 64322400 -39172574 + (TCTCTG)n Simple_repeat Simple_repeat 2 82 0 5 1075 297 303 0 11 chr15 64322455 64322545 -39172429 + (TG)n Simple_repeat Simple_repeat 2 90 0 5 1075 212 357 90 54 chr15 64322609 64322775 -39172199 - B4A SINE B4 -120 172 1 5 1075 262 313 111 0 chr15 64322826 64322925 -39172049 - Tigger7 DNA MER2_type -3 2488 2379 5 1075 1628 310 52 19 chr15 64322941 64323477 -39171497 - Tigger7 DNA MER2_type -1903 588 35 5 1075 607 328 128 3 chr15 64323988 64324294 -39170680 + MER2 DNA MER2_type 1 344 -1 5 1075 231 300 14 0 chr15 64324398 64324468 -39170506 - MER5B DNA MER1_type 0 178 108 5 1075 3362 65 5 0 chr15 64324954 64325352 -39169622 + MTB LTR MaLR 1 400 0 5 1075 740 283 28 36 chr15 64325485 64325738 -39169236 - L1MA4 LINE L1 -373 5927 5677 5 1075 24 0 0 0 chr15 64325781 64325805 -39169169 + AT_rich Low_complexity Low_complexity 1 24 0 5 1075 232 282 0 14 chr15 64326710 64326782 -39168192 + MT2A LTR ERVL 20 90 -443 5 1075 431 209 0 9 chr15 64327081 64327197 -39167777 + (CCAA)n Simple_repeat Simple_repeat 1 115 0 5 1075 346 182 33 22 chr15 64327331 64327421 -39167553 + HAL1-2a_MD LINE L1 2335 2425 -599 5 1075 327 364 59 9 chr15 64327569 64327788 -39167186 + L1M5 LINE L1 2341 2570 -3576 5 1075 291 300 27 9 chr15 64327792 64327903 -39167071 - Arthur1 DNA Tip100 -295 3652 3540 5 1075 264 217 109 36 chr15 64328109 64328219 -39166755 - ORR1B1 LTR MaLR -5 389 272 5 1075 273 350 0 0 chr15 64328660 64328740 -39166234 - Arthur1 DNA Tip100 -3868 79 2 5 1075 205 163 23 0 chr15 64328741 64328784 -39166190 + L2a LINE L2 3380 3423 -3 5 1075 366 143 0 0 chr15 64328903 64328966 -39166008 + L1_Mur3 LINE L1 1128 1190 -6538 5 1075 9290 59 5 8 chr15 64328962 64330139 -39164835 + L1Md_F2 LINE L1 4413 5585 -298 5 1075 8263 62 3 19 chr15 64330140 64331151 -39163823 + L1Md_F2 LINE L1 5587 6581 -1 5 1075 6109 164 272 2 chr15 64331151 64331209 -39163765 + L1_Mur3 LINE L1 2095 2154 -3726 5 1075 1376 108 0 26 chr15 64331209 64331399 -39163575 + B2_Mm2 SINE B2 3 187 -8 5 1075 6109 164 272 2 chr15 64331399 64332841 -39162133 + L1_Mur3 LINE L1 2155 4000 -1880 5 1075 370 235 6 129 chr15 64332842 64333013 -39161961 + RMER1A Other Other 36 185 -845 5 1075 2336 187 118 0 chr15 64332984 64333434 -39161540 + RMER1B Other Other 564 1066 0 5 1075 4189 210 41 14 chr15 64333425 64334308 -39160666 + Lx6 LINE L1 5784 6690 -770 5 1075 1425 263 134 69 chr15 64334329 64334905 -39160069 - RLTR26 LTR ERVK -29 613 1 5 1075 2242 198 137 0 chr15 64334905 64335329 -39159645 + Lx6 LINE L1 6684 7165 -295 5 1075 609 174 97 15 chr15 64335333 64335467 -39159507 + Lx6 LINE L1 7312 7456 -4 5 1075 939 180 29 11 chr15 64335937 64336111 -39158863 - Lx6 LINE L1 -10 7450 7274 5 1075 247 245 7 42 chr15 64336119 64336210 -39158764 + Lx7 LINE L1 5938 6027 -1433 5 1075 1397 281 77 16 chr15 64336220 64336767 -39158207 - Charlie1a DNA MER1_type -601 854 275 5 1075 962 268 30 67 chr15 64336772 64337072 -39157902 + B4 SINE B4 3 291 -1 5 1075 1018 242 31 0 chr15 64337134 64337328 -39157646 - B3 SINE B2 -14 202 3 5 1075 311 345 17 0 chr15 64337377 64337493 -39157481 - Charlie1a DNA MER1_type -1222 233 116 5 1075 287 369 60 27 chr15 64338050 64338234 -39156740 - RMER12 LTR ERVK 0 1322 1133 5 1075 4512 134 25 24 chr15 64338558 64339362 -39155612 - RLTR22_Mur LTR ERVK -1043 805 1 5 1075 2956 285 112 22 chr15 64339497 64340383 -39154591 - L1M2 LINE L1 -1700 5145 4191 5 1075 225 94 0 0 chr15 64340383 64340415 -39154559 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 1075 2956 285 112 22 chr15 64340415 64340994 -39153980 - L1M2 LINE L1 -2655 4190 3549 5 1075 1123 212 0 22 chr15 64340998 64341225 -39153749 - RMER1C Other Other 0 1342 1121 5 1075 448 316 47 22 chr15 64341235 64341932 -39153042 - L1M2 LINE L1 -3834 3014 2297 5 1075 250 93 47 0 chr15 64342756 64342799 -39152175 + MER5A1 DNA MER1_type 102 146 -20 5 1075 195 338 13 39 chr15 64342989 64343066 -39151908 - L2c LINE L2 -27 3360 3286 5 1075 379 149 81 0 chr15 64344884 64344958 -39150016 - ID_B1 SINE B4 -8 216 137 6 1075 227 179 26 0 chr15 64344972 64345011 -39149963 - ID_B1 SINE B4 -133 91 52 6 1075 233 167 328 16 chr15 64344980 64345041 -39149933 - ID4_ SINE ID -2 81 2 6 1075 1388 257 86 22 chr15 64345111 64345528 -39149446 + RLTR17 LTR ERVK 200 643 -49 6 1075 265 133 47 62 chr15 64345550 64345614 -39149360 + RMER3D-int LTR ERVK 1 63 -2779 6 1075 3582 188 3 30 chr15 64345638 64346341 -39148633 + RMER3D-int LTR ERVK 2135 2818 -24 6 1075 1130 239 4 48 chr15 64346395 64346668 -39148306 + RLTR17 LTR ERVK 105 365 -327 6 1075 522 0 0 0 chr15 64346761 64346819 -39148155 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 6 1075 318 239 98 0 chr15 64346880 64346972 -39148002 - L1M5 LINE L1 -533 5631 5531 6 1075 374 338 135 30 chr15 64347137 64347872 -39147102 - L1M5 LINE L1 -865 5281 4472 6 1075 6105 106 17 4 chr15 64347872 64348708 -39146266 - L1_Mus4 LINE L1 -7 6629 5783 6 1075 374 338 135 30 chr15 64348708 64348762 -39146212 - L1M5 LINE L1 -1675 4471 4410 6 1075 605 248 101 18 chr15 64348933 64349110 -39145864 - B3 SINE B2 -10 206 2 6 1075 1735 207 30 27 chr15 64349418 64349791 -39145183 - ORR1D1 LTR MaLR 0 374 1 6 1075 190 410 29 0 chr15 64350265 64350404 -39144570 + MIRb SINE MIR 34 176 -92 6 1075 266 343 0 0 chr15 64350913 64351015 -39143959 + L3 LINE CR1 3567 3668 -821 6 1075 327 341 62 33 chr15 64351447 64351723 -39143251 + L1M5 LINE L1 5447 5730 -394 6 1075 226 259 0 36 chr15 64351808 64351864 -39143110 + LTR16B1 LTR ERVL 1 54 -426 6 1075 2427 226 4 8 chr15 64352566 64353047 -39141927 + Lx6 LINE L1 6982 7460 0 6 1075 209 150 16 62 chr15 64353147 64353211 -39141763 + (TATATG)n Simple_repeat Simple_repeat 3 63 0 6 1075 474 18 0 0 chr15 64353268 64353323 -39141651 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1075 21 0 0 0 chr15 64353530 64353551 -39141423 + AT_rich Low_complexity Low_complexity 1 21 0 6 1075 235 268 177 11 chr15 64353877 64353979 -39140995 - MIR SINE MIR -138 124 14 6 1075 1153 246 45 108 chr15 64354366 64354763 -39140211 - MTEa LTR MaLR -5 374 3 6 134 40151 30 6 9 chr15 64354881 64360899 -39134075 - L1Md_T LINE L1 -405 6177 181 6 1076 1194 65 0 0 chr15 64360910 64361049 -39133925 - B1_Mm SINE Alu -7 140 2 6 1076 989 216 24 5 chr15 64361123 64361332 -39133642 + ORR1D1 LTR MaLR 3 215 -159 6 1076 397 246 68 15 chr15 64361333 64361465 -39133509 + RLTR15 LTR ERVK 1 139 -220 6 1076 198 0 0 0 chr15 64361465 64361487 -39133487 + (GA)n Simple_repeat Simple_repeat 1 22 0 6 1076 646 235 61 53 chr15 64361492 64361739 -39133235 + RLTR15 LTR ERVK 90 338 -21 6 1076 430 154 39 0 chr15 64361773 64361851 -39133123 + ORR1D1 LTR MaLR 284 364 -10 6 1076 528 259 0 0 chr15 64361853 64362015 -39132959 + (TA)n Simple_repeat Simple_repeat 1 162 0 6 1076 606 159 0 0 chr15 64361978 64362085 -39132889 + (CA)n Simple_repeat Simple_repeat 2 108 0 6 1076 261 0 0 0 chr15 64362179 64362208 -39132766 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 6 1076 390 129 0 0 chr15 64362415 64362477 -39132497 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 1076 22 35 0 0 chr15 64363087 64363116 -39131858 + AT_rich Low_complexity Low_complexity 1 29 0 6 1076 185 366 138 11 chr15 64363250 64363344 -39131630 - MIRm SINE MIR -148 128 23 6 1076 238 173 38 19 chr15 64363344 64363397 -39131577 + (TCTG)n Simple_repeat Simple_repeat 2 55 0 6 1076 329 187 13 0 chr15 64363421 64363496 -39131478 + (TATG)n Simple_repeat Simple_repeat 1 76 0 6 1076 393 123 0 0 chr15 64365563 64365628 -39129346 + (TG)n Simple_repeat Simple_repeat 1 65 0 6 1076 210 279 70 26 chr15 64367499 64367613 -39127361 + MIR3 SINE MIR 68 186 -22 6 1076 1710 160 9 73 chr15 64368142 64368472 -39126502 + ORR1A3 LTR MaLR 18 326 0 6 1076 214 346 26 0 chr15 64368739 64368817 -39126157 - MIRb SINE MIR -138 130 51 6 1076 374 264 252 21 chr15 64369066 64369300 -39125674 + B4A SINE B4 1 288 -4 6 1076 291 28 0 0 chr15 64369330 64369366 -39125608 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1076 5476 40 16 3 chr15 64369833 64370465 -39124509 + L1Md_F3 LINE L1 5944 6583 -1 6 1076 4237 13 0 0 chr15 64370597 64371070 -39123904 + L1Md_A LINE L1 5114 5586 -297 6 1076 9335 18 0 0 chr15 64371070 64372065 -39122909 + L1Md_A LINE L1 5587 6581 -1 6 1076 210 118 0 0 chr15 64373137 64373171 -39121803 + (CAG)n Simple_repeat Simple_repeat 1 34 0 6 1076 223 295 149 65 chr15 64374229 64374443 -39120531 + MIRb SINE MIR 2 233 -35 6 1076 695 299 140 24 chr15 64375688 64375978 -39118996 + MLT1D LTR MaLR 139 466 -39 6 1076 333 0 0 0 chr15 64375978 64376015 -39118959 + (TTA)n Simple_repeat Simple_repeat 2 38 0 6 1076 695 299 140 24 chr15 64376015 64376053 -39118921 + MLT1D LTR MaLR 467 504 -1 6 1076 198 267 48 48 chr15 64376073 64376136 -39118838 - MIRb SINE MIR -31 237 175 6 1076 358 270 147 41 chr15 64376221 64376418 -39118556 + MTEb LTR MaLR 138 355 -24 6 1076 1664 187 75 18 chr15 64376879 64377211 -39117763 - MTC LTR MaLR 0 421 71 6 1076 435 38 0 0 chr15 64377218 64377271 -39117703 + (TCC)n Simple_repeat Simple_repeat 2 54 0 6 1076 7556 160 47 8 chr15 64377290 64378489 -39116485 - Lx5 LINE L1 -1 7049 5804 6 1076 1068 133 16 57 chr15 64378489 64378673 -39116301 + L1_Mur2 LINE L1 4598 4773 -1104 6 1076 22 35 0 0 chr15 64378688 64378717 -39116257 + AT_rich Low_complexity Low_complexity 1 29 0 6 1076 280 128 0 41 chr15 64378722 64378771 -39116203 - ORR1B1 LTR MaLR -8 386 340 6 1076 5464 68 15 3 chr15 64378788 64379514 -39115460 - MusHAL1 LINE L1 -1 2711 1977 6 1076 543 271 105 11 chr15 64379514 64379704 -39115270 + MLT2B4 LTR ERVL 9 216 -340 6 1076 234 200 22 121 chr15 64380410 64380501 -39114473 - MIR3 SINE MIR -29 179 98 6 1076 22 0 0 0 chr15 64380868 64380890 -39114084 + AT_rich Low_complexity Low_complexity 1 22 0 6 1076 456 19 0 0 chr15 64380983 64381036 -39113938 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 6 1076 322 260 48 48 chr15 64382628 64382733 -39112241 - MLT1A0 LTR MaLR -12 353 249 6 1076 247 288 61 0 chr15 64383191 64383257 -39111717 - MLT1A0 LTR MaLR -94 271 202 6 1076 729 88 0 0 chr15 64383279 64383381 -39111593 + (CATATA)n Simple_repeat Simple_repeat 5 106 0 6 1076 726 290 148 38 chr15 64383489 64383887 -39111087 - Lx8 LINE L1 -162 7311 6870 6 1076 446 330 80 27 chr15 64383898 64384085 -39110889 - MLT1A0 LTR MaLR -165 200 4 6 1076 181 233 150 0 chr15 64384884 64384944 -39110030 + MIR SINE MIR 36 104 -158 6 1076 342 237 102 53 chr15 64385032 64385219 -39109755 + L1MD LINE L1 3729 3924 -2222 6 1076 32 0 0 0 chr15 64386429 64386461 -39108513 + AT_rich Low_complexity Low_complexity 1 32 0 6 1076 380 285 75 5 chr15 64386533 64386720 -39108254 - L1MC4 LINE L1 -496 7546 7347 6 1076 352 312 10 0 chr15 64386736 64386832 -39108142 - PB1D10 SINE Alu -2 115 19 6 1076 476 322 53 96 chr15 64386853 64387102 -39107872 - L1MC4 LINE L1 -733 7309 7077 6 1076 261 0 0 0 chr15 64387102 64387131 -39107843 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 6 1076 476 322 53 96 chr15 64387131 64387498 -39107476 - L1MC4 LINE L1 -966 7076 6720 6 1076 243 267 124 0 chr15 64387499 64387604 -39107370 - L1MC4 LINE L1 -1462 6580 6463 6 1076 531 266 71 16 chr15 64388196 64388322 -39106652 - RSINE1 SINE B4 -31 134 2 6 1076 241 293 9 57 chr15 64389329 64389434 -39105540 + L2a LINE L2 3311 3410 -16 6 1076 477 260 0 28 chr15 64390908 64391015 -39103959 + PB1D10 SINE Alu 7 110 -7 6 1076 1692 236 17 43 chr15 64391037 64391457 -39103517 + RMER1B Other Other 399 807 -259 6 1076 348 370 44 4 chr15 64391823 64392073 -39102901 + LTR16C LTR ERVL 228 487 -2 6 1076 531 0 0 0 chr15 64392827 64392886 -39102088 + (ATAGG)n Simple_repeat Simple_repeat 1 59 0 6 1076 588 29 0 0 chr15 64392888 64392958 -39102016 + (GA)n Simple_repeat Simple_repeat 2 71 0 6 1076 393 117 0 0 chr15 64393083 64393143 -39101831 + (TTCC)n Simple_repeat Simple_repeat 2 61 0 6 1076 737 216 34 102 chr15 64393146 64393352 -39101622 - B3A SINE B2 -6 192 1 6 1076 730 330 58 13 chr15 64393964 64394274 -39100700 - MLT1G1 LTR MaLR -8 571 248 6 1076 186 43 0 0 chr15 64395259 64395282 -39099692 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 1076 660 124 0 0 chr15 64395282 64395386 -39099588 + (TA)n Simple_repeat Simple_repeat 1 105 0 6 1076 315 0 0 0 chr15 64395386 64395420 -39099554 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1076 496 77 26 0 chr15 64395498 64395576 -39099398 + (TATG)n Simple_repeat Simple_repeat 4 83 0 6 1076 723 288 81 112 chr15 64395767 64396224 -39098750 - Lx8 LINE L1 -309 7164 6722 6 1076 603 320 6 11 chr15 64396620 64396800 -39098174 - Lx8 LINE L1 -733 6740 6562 6 1076 532 27 27 0 chr15 64397031 64397105 -39097869 + (TCTA)n Simple_repeat Simple_repeat 4 79 0 6 1076 1114 242 77 51 chr15 64397256 64397609 -39097365 - MTE2b LTR MaLR -8 371 10 6 1076 457 279 58 30 chr15 64397672 64398018 -39096956 + L1MDa LINE L1 1707 2048 -4585 6 1076 228 111 0 0 chr15 64398222 64398258 -39096716 + (GGAGAA)n Simple_repeat Simple_repeat 5 40 0 6 1076 909 86 0 0 chr15 64398423 64398551 -39096423 + (TCTA)n Simple_repeat Simple_repeat 4 131 0 6 1076 754 329 54 40 chr15 64399131 64399485 -39095489 + LTR40a LTR ERVL 4 362 -157 6 1076 966 256 55 44 chr15 64399519 64399904 -39095070 + L1MDa LINE L1 3893 4281 -2256 6 1076 267 316 0 0 chr15 64399906 64400001 -39094973 - MLT1B LTR MaLR 0 390 296 6 1076 269 171 146 47 chr15 64400017 64400143 -39094831 - ORR1E LTR MaLR -20 359 209 6 1076 313 250 96 8 chr15 64400312 64400437 -39094537 + HAL1-2a_MD LINE L1 2296 2431 -593 6 1076 974 275 31 71 chr15 64400696 64400922 -39094052 + B4A SINE B4 1 222 -70 6 1076 1562 56 9 14 chr15 64400922 64401141 -39093833 + L1_Mus3 LINE L1 6421 6638 0 6 1076 974 275 31 71 chr15 64401141 64401208 -39093766 + B4A SINE B4 223 282 -10 6 1076 513 0 0 0 chr15 64401221 64401278 -39093696 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1076 441 0 0 0 chr15 64401278 64401326 -39093648 + (GA)n Simple_repeat Simple_repeat 2 50 0 6 1076 553 337 32 20 chr15 64401382 64401633 -39093341 + ORR1E LTR MaLR 1 254 -105 6 1076 262 216 30 7 chr15 64401693 64401768 -39093206 - MTD LTR MaLR 0 379 295 6 1076 853 102 29 7 chr15 64401784 64401922 -39093052 - B1_Mus1 SINE Alu 0 148 8 6 1076 332 283 39 55 chr15 64401812 64401939 -39093035 - MT2B LTR ERVL -325 276 152 6 1076 268 203 2 0 chr15 64401960 64402018 -39092956 - MTD LTR MaLR -144 275 211 6 1076 734 90 18 0 chr15 64402044 64402155 -39092819 + (TTTC)n Simple_repeat Simple_repeat 1 113 0 6 1076 736 215 20 70 chr15 64402159 64402191 -39092783 - Lx5 LINE L1 0 7050 7027 7 1076 2901 88 49 3 chr15 64402191 64402580 -39092394 - MTB_Mm LTR MaLR 0 407 1 7 1076 736 215 20 70 chr15 64402580 64402747 -39092227 - Lx5 LINE L1 -24 7026 6861 7 1076 308 276 59 91 chr15 64402753 64402940 -39092034 - MIR SINE MIR -47 215 35 7 1076 196 303 88 31 chr15 64403131 64403291 -39091683 - L2b LINE L2 0 3375 3207 7 1076 662 124 8 0 chr15 64403519 64403640 -39091334 - Lx LINE L1 0 6654 6533 7 1076 1121 251 44 33 chr15 64404158 64404524 -39090450 + MTD LTR MaLR 50 419 0 7 1076 441 0 0 0 chr15 64405069 64405118 -39089856 + (TA)n Simple_repeat Simple_repeat 1 49 0 7 1076 206 203 171 26 chr15 64405203 64405279 -39089695 + MIR SINE MIR 59 145 -117 7 1076 1196 254 32 52 chr15 64405365 64405734 -39089240 + MTEa LTR MaLR 1 362 -17 7 1076 1673 38 0 27 chr15 64407895 64408114 -39086860 + L1_Mus2 LINE L1 6353 6565 -1 7 1076 456 135 0 0 chr15 64409026 64409100 -39085874 + (CTG)n Simple_repeat Simple_repeat 1 74 0 7 1076 450 0 0 0 chr15 64409133 64409183 -39085791 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 1076 793 307 39 61 chr15 64409750 64410159 -39084815 + MTD LTR MaLR 6 405 -14 7 1076 634 296 49 70 chr15 64412164 64412451 -39082523 - ORR1E LTR MaLR -71 288 8 7 1076 2136 316 39 39 chr15 64412439 64413209 -39081765 - MTE-int LTR MaLR -34 1546 777 7 1076 212 339 92 29 chr15 64413336 64413509 -39081465 + MIR SINE MIR 27 210 -52 7 1076 294 283 20 29 chr15 64413836 64413938 -39081036 - B1F SINE Alu -44 105 5 7 1076 571 339 25 57 chr15 64414139 64414455 -39080519 - MARNA DNA Mariner -176 410 105 7 1076 1878 248 62 104 chr15 64415046 64415918 -39079056 - RMER13A LTR ERVK -70 838 14 7 1076 746 250 45 87 chr15 64416157 64416490 -39078484 - RMER17A-int LTR ERVK -312 1416 1098 7 1076 511 219 9 0 chr15 64416639 64416744 -39078230 - RMER17A-int LTR ERVK -641 1087 982 7 1076 198 0 0 0 chr15 64417081 64417103 -39077871 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 7 1076 987 291 20 90 chr15 64417508 64417863 -39077111 - MTEa LTR MaLR -17 362 33 7 1076 351 348 116 0 chr15 64418215 64418439 -39076535 - Tigger8 DNA MER2_type -104 562 313 7 1076 192 91 68 0 chr15 64418766 64418810 -39076164 + (TA)n Simple_repeat Simple_repeat 1 47 0 7 1076 1020 283 58 17 chr15 64419128 64419522 -39075452 + RMER1B Other Other 71 578 -764 7 1076 2963 221 53 65 chr15 64419512 64420396 -39074578 + RMER1B Other Other 126 1066 0 7 1076 790 299 137 39 chr15 64421837 64422356 -39072618 - MLT1L LTR MaLR -4 606 37 7 1076 194 191 21 0 chr15 64422966 64423013 -39071961 + (ATG)n Simple_repeat Simple_repeat 3 50 0 7 1076 183 80 0 0 chr15 64423021 64423046 -39071928 + (CAT)n Simple_repeat Simple_repeat 3 27 0 7 1076 553 224 101 17 chr15 64423047 64423315 -39071659 - ORR1D2 LTR MaLR -1 406 23 7 1076 4460 12 0 24 chr15 64423315 64423820 -39071154 - MT2_Mm LTR ERVL 0 493 1 7 1076 321 0 0 0 chr15 64423820 64423858 -39071116 - MERVL-int LTR ERVL 0 5485 5448 7 1076 324 157 58 46 chr15 64423858 64423945 -39071029 - ORR1D2-int LTR MaLR -1323 640 553 7 1076 48265 16 7 0 chr15 64423949 64429268 -39065706 - MERVL-int LTR ERVL -130 5355 1 7 1076 4478 10 0 24 chr15 64429268 64429773 -39065201 - MT2_Mm LTR ERVL 0 493 1 7 1076 225 0 0 0 chr15 64430283 64430308 -39064666 + (TG)n Simple_repeat Simple_repeat 1 25 0 7 1076 340 322 128 50 chr15 64430553 64430896 -39064078 - MLT1C LTR MaLR 0 467 98 7 1076 719 174 18 13 chr15 64431161 64431312 -39063662 - ORR1D1 LTR MaLR -10 364 178 7 1076 2219 177 39 77 chr15 64431619 64432152 -39062822 - RLTR20B1 LTR ERVK -50 513 1 7 1076 712 130 89 0 chr15 64432258 64432381 -39062593 - B1_Mus1 SINE Alu -7 141 8 7 1076 229 240 58 117 chr15 64432957 64433094 -39061880 + RMER15 LTR ERVL 1 129 -446 7 1076 1775 222 38 181 chr15 64433126 64433815 -39061159 - RMER19C LTR ERVK 0 611 22 7 1076 549 285 96 11 chr15 64433827 64434015 -39060959 + RMER15 LTR ERVL 280 483 -92 7 1076 31592 108 20 11 chr15 64434058 64440297 -39054677 - L1_Mus1 LINE L1 -6 6561 264 7 1076 313 58 39 0 chr15 64440375 64440427 -39054547 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 1076 432 37 0 0 chr15 64440446 64440500 -39054474 + (TC)n Simple_repeat Simple_repeat 2 55 0 7 1076 272 303 56 11 chr15 64440968 64441058 -39053916 - MIRc SINE MIR -167 101 8 7 1076 215 208 37 19 chr15 64441122 64441176 -39053798 + GA-rich Low_complexity Low_complexity 3 57 0 7 1076 640 298 124 62 chr15 64441886 64441993 -39052981 - MLT2B1 LTR ERVL -209 311 295 7 1076 2903 54 56 3 chr15 64441993 64442367 -39052607 + MTA_Mm LTR MaLR 1 394 -2 7 1076 640 304 38 60 chr15 64442367 64442662 -39052312 - MLT2B1 LTR ERVL -226 294 1 7 1076 420 20 0 0 chr15 64442988 64443037 -39051937 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1076 575 319 18 6 chr15 64443051 64443218 -39051756 - B3A SINE B2 -25 173 5 7 1076 184 360 43 9 chr15 64443327 64443442 -39051532 + L2b LINE L2 2960 3078 -297 7 1076 283 315 124 0 chr15 64444052 64444141 -39050833 - Lx8 LINE L1 -1148 6325 6226 7 1076 1254 196 0 4 chr15 64444146 64444372 -39050602 - URR1B DNA MER1_type 0 225 1 7 1076 252 228 127 0 chr15 64444373 64444452 -39050522 + Lx8 LINE L1 6317 6405 -1068 7 1076 246 366 45 0 chr15 64444630 64444764 -39050210 - MIR SINE MIR -115 147 8 7 1076 336 354 75 33 chr15 64445388 64445628 -39049346 + MLT1L LTR MaLR 361 610 0 7 1076 340 352 109 41 chr15 64447012 64447279 -39047695 + MLT1H LTR MaLR 2 286 -263 7 1076 729 133 99 49 chr15 64447510 64447652 -39047322 + B1_Mur4 SINE Alu 1 149 -1 7 1076 910 288 55 55 chr15 64448443 64448828 -39046146 + Lx9 LINE L1 6980 7364 -280 7 1076 256 300 77 108 chr15 64449202 64449502 -39045472 + MLT1G1 LTR MaLR 3 304 -291 7 1076 725 192 0 0 chr15 64449841 64449971 -39045003 - B1_Mus2 SINE Alu -16 131 2 7 1076 195 222 0 0 chr15 64450700 64450745 -39044229 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1076 241 232 48 12 chr15 64450794 64450877 -39044097 + L1MA9 LINE L1 6153 6238 -74 7 1076 185 316 0 73 chr15 64451482 64451564 -39043410 + L3 LINE CR1 4329 4404 -85 7 1076 539 22 66 11 chr15 64451650 64451741 -39043233 + (TCTA)n Simple_repeat Simple_repeat 1 96 0 7 1076 1620 208 33 8 chr15 64452631 64452990 -39041984 - ORR1D1 LTR MaLR 0 374 7 7 1076 279 138 319 18 chr15 64454998 64455111 -39039863 - B2_Mm2 SINE B2 -2 193 47 7 1076 1053 117 18 0 chr15 64455163 64455326 -39039648 - B2_Mm1t SINE B2 -26 167 2 7 1076 878 308 26 10 chr15 64455594 64455899 -39039075 + MLT1A0 LTR MaLR 28 337 -28 7 1076 482 250 115 11 chr15 64455938 64456112 -39038862 + RMER30 DNA MER1_type 5 196 -6 7 1076 455 286 64 18 chr15 64456152 64456323 -39038651 - MER77 LTR ERVL -111 496 318 7 1076 706 151 7 7 chr15 64456520 64456660 -39038314 + C-rich Low_complexity Low_complexity 2 141 0 7 1076 3988 192 47 9 chr15 64456836 64457598 -39037376 + Lx5 LINE L1 6260 7050 0 7 1076 1193 141 54 40 chr15 64458473 64458695 -39036279 - URR1B DNA MER1_type 0 225 1 7 1076 246 62 0 0 chr15 64459159 64459191 -39035783 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 7 1076 1700 186 117 23 chr15 64459633 64460018 -39034956 + MTC LTR MaLR 1 421 0 7 1076 216 0 0 0 chr15 64460515 64460539 -39034435 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1076 335 307 51 51 chr15 64461483 64461641 -39033333 + MLT1A LTR MaLR 3 160 -214 7 1076 246 62 0 0 chr15 64461660 64461692 -39033282 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 1076 747 129 0 0 chr15 64461692 64461847 -39033127 + (GA)n Simple_repeat Simple_repeat 2 156 0 7 1076 1177 51 0 0 chr15 64461916 64462054 -39032920 + B1_Mus2 SINE Alu 1 138 -9 7 1076 189 26 51 26 chr15 64462063 64462102 -39032872 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 7 1076 436 308 7 0 chr15 64462117 64462263 -39032711 + MLT1A LTR MaLR 224 370 -4 7 1076 317 274 63 119 chr15 64462681 64462934 -39032040 - LTR81B LTR ERV1? -1104 289 51 7 1076 2411 192 10 16 chr15 64462934 64463443 -39031531 + RLTR20B2 LTR ERVK 1 506 -54 7 1076 250 352 37 28 chr15 64463586 64463694 -39031280 + MER81 DNA AcHobo 1 109 -5 7 1076 674 232 85 45 chr15 64464310 64464486 -39030488 + B3A SINE B2 1 183 -15 7 1076 1353 86 21 0 chr15 64464621 64464808 -39030166 + B2_Mm2 SINE B2 1 191 -4 7 1076 21 0 0 0 chr15 64465294 64465315 -39029659 + AT_rich Low_complexity Low_complexity 1 21 0 7 1076 276 247 0 38 chr15 64465407 64465487 -39029487 - L1MB4 LINE L1 -170 6010 5934 7 1076 818 259 25 46 chr15 64465696 64465839 -39029135 - Lx8 LINE L1 -969 6504 6367 7 1076 3595 13 2 0 chr15 64465839 64466234 -39028740 + MTA_Mm LTR MaLR 1 396 0 7 1076 818 259 25 46 chr15 64466234 64466329 -39028645 - Lx8 LINE L1 -1107 6366 6271 7 1076 3715 47 0 0 chr15 64466469 64466920 -39028054 - L1_Mm LINE L1 -433 5450 5000 7 1076 5094 19 5 19 chr15 64466921 64467515 -39027459 + L1Md_F3 LINE L1 5999 6584 0 7 1076 221 263 23 78 chr15 64468916 64469044 -39025930 - L2c LINE L2 -235 3152 3032 7 1076 559 279 87 32 chr15 64469306 64469491 -39025483 - B3 SINE B2 -15 201 7 7 1076 249 313 193 0 chr15 64469727 64469893 -39025081 + Kanga1c DNA Tc2 162 358 -371 7 1076 2115 174 46 5 chr15 64469900 64470292 -39024682 - MTC LTR MaLR -13 408 1 7 1076 665 286 90 40 chr15 64470294 64470640 -39024334 + Kanga1c DNA Tc2 364 726 -3 7 1076 185 100 98 24 chr15 64470752 64470793 -39024181 + L3b LINE CR1 425 468 -14 7 1076 312 316 144 40 chr15 64471620 64471897 -39023077 + L1M5 LINE L1 5317 5622 -557 7 1076 21 36 0 0 chr15 64473299 64473327 -39021647 + AT_rich Low_complexity Low_complexity 1 28 0 7 1076 560 329 40 73 chr15 64473421 64473792 -39021182 + MTE2b LTR MaLR 21 379 0 7 1076 240 243 56 14 chr15 64473804 64473875 -39021099 - L1MC LINE L1 -2082 5800 5727 7 1076 258 106 0 0 chr15 64474021 64474068 -39020906 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1076 495 33 0 0 chr15 64474068 64474128 -39020846 + (GA)n Simple_repeat Simple_repeat 2 62 0 8 1076 240 185 0 0 chr15 64475506 64475560 -39019414 + (CA)n Simple_repeat Simple_repeat 2 55 0 8 1076 2165 101 6 0 chr15 64475817 64476134 -39018840 + ORR1A2 LTR MaLR 1 319 -8 8 1076 2250 145 55 0 chr15 64476138 64476539 -39018435 + ORR1A2-int LTR MaLR 1 423 -1540 8 1076 1181 92 0 0 chr15 64476525 64476698 -39018276 - ORR1A2 LTR MaLR -154 173 1 8 1076 9068 196 79 32 chr15 64476705 64478333 -39016641 - Lx7 LINE L1 -39 7657 5956 8 1076 696 94 0 0 chr15 64478333 64478439 -39016535 + (CTAAT)n Simple_repeat Simple_repeat 4 109 0 8 1076 9068 184 38 35 chr15 64478439 64478918 -39016056 - Lx7 LINE L1 -1741 5955 5453 8 1076 5088 162 43 11 chr15 64478910 64479090 -39015884 + L1_Mur3 LINE L1 4457 4635 -1245 8 1076 501 17 0 0 chr15 64479090 64479148 -39015826 + (CA)n Simple_repeat Simple_repeat 1 58 0 8 1076 378 0 0 0 chr15 64479148 64479189 -39015785 + (GA)n Simple_repeat Simple_repeat 2 43 0 8 1076 5088 167 42 13 chr15 64479189 64479997 -39014977 + L1_Mur3 LINE L1 4636 5499 -804 8 1076 27 0 0 0 chr15 64481111 64481138 -39013836 + AT_rich Low_complexity Low_complexity 1 27 0 8 1076 564 15 0 0 chr15 64481178 64481243 -39013731 + (TG)n Simple_repeat Simple_repeat 1 65 0 8 1076 246 303 78 11 chr15 64481460 64481550 -39013424 + B1F1 SINE Alu 4 99 -50 8 1076 1985 267 49 16 chr15 64481759 64482272 -39012702 - Lx8 LINE L1 -189 7284 6755 8 1076 225 0 0 0 chr15 64482276 64482301 -39012673 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 8 1076 841 278 10 0 chr15 64482578 64482783 -39012191 + B3 SINE B2 3 209 -7 8 1076 822 168 7 20 chr15 64483263 64483409 -39011565 - B1_Mur4 SINE Alu -1 149 6 8 1076 341 218 0 164 chr15 64483306 64483465 -39011509 - MT2B LTR ERVL -344 257 125 8 1076 949 136 51 56 chr15 64483487 64483682 -39011292 - B2_Mm2 SINE B2 0 195 2 8 1076 616 289 62 0 chr15 64483904 64484115 -39010859 + Lx8 LINE L1 6780 7003 -470 8 1076 1069 260 119 28 chr15 64484138 64484498 -39010476 + Lx8 LINE L1 7079 7471 -2 8 1076 990 93 192 0 chr15 64484718 64484879 -39010095 + B2_Mm2 SINE B2 2 193 -2 8 1076 282 295 50 58 chr15 64484901 64485173 -39009801 + L1M5 LINE L1 5342 5607 -635 8 1076 1531 184 55 29 chr15 64485300 64485648 -39009326 - MTC LTR MaLR 0 421 65 8 1076 406 222 156 0 chr15 64485649 64485739 -39009235 - B1_Mus1 SINE Alu -26 122 19 8 1076 25 0 0 0 chr15 64485959 64485984 -39008990 + AT_rich Low_complexity Low_complexity 1 25 0 8 1076 1130 245 63 43 chr15 64486313 64486612 -39008362 - MTEa LTR MaLR -4 375 71 8 1076 294 246 0 14 chr15 64486614 64486684 -39008290 + MTE2b LTR MaLR 9 77 -302 8 1076 275 122 20 0 chr15 64486684 64486733 -39008241 + (TCTCCC)n Simple_repeat Simple_repeat 4 53 0 8 1076 963 26 0 0 chr15 64486733 64486847 -39008127 + (CA)n Simple_repeat Simple_repeat 1 114 0 8 1077 294 314 72 55 chr15 64487513 64487749 -39007225 - RMER15 LTR ERVL -7 568 329 8 1077 368 264 31 0 chr15 64488865 64488994 -39005980 - L1M2 LINE L1 -1298 4845 4713 8 1077 674 195 24 0 chr15 64489041 64489164 -39005810 - RSINE1 SINE B4 -38 127 2 8 1077 625 301 144 53 chr15 64489282 64489769 -39005205 + MT2A LTR ERVL 1 531 -2 8 1077 242 366 0 0 chr15 64489914 64489985 -39004989 - ID SINE ID -152 72 2 8 1077 311 317 154 0 chr15 64491185 64491308 -39003666 + MLT1A0 LTR MaLR 172 313 -52 8 1077 198 0 0 0 chr15 64491520 64491542 -39003432 + (TA)n Simple_repeat Simple_repeat 1 22 0 8 1077 760 260 102 73 chr15 64491835 64492080 -39002894 + B4A SINE B4 41 292 0 8 1077 22 88 0 0 chr15 64492378 64492435 -39002539 + AT_rich Low_complexity Low_complexity 1 57 0 8 1077 1355 175 16 8 chr15 64492574 64492828 -39002146 - Lx4B LINE L1 -1 7057 6802 8 1077 207 0 0 0 chr15 64492961 64492984 -39001990 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 1077 408 257 83 99 chr15 64493429 64493699 -39001275 + MTD LTR MaLR 6 240 -179 8 1077 909 140 0 0 chr15 64494144 64494294 -39000680 + (AGGGGG)n Simple_repeat Simple_repeat 3 152 0 8 1077 608 36 12 0 chr15 64494822 64494905 -39000069 + (TG)n Simple_repeat Simple_repeat 1 84 0 8 1077 416 208 175 0 chr15 64494906 64495026 -38999948 - B3A SINE B2 -57 141 1 8 1077 763 295 35 49 chr15 64495462 64495747 -38999227 - B4 SINE B4 -8 284 4 8 1077 42 0 0 0 chr15 64497160 64497202 -38997772 + AT_rich Low_complexity Low_complexity 1 42 0 8 1077 314 189 65 19 chr15 64497212 64497320 -38997654 - Lx5 LINE L1 0 7050 6938 8 1077 1607 112 36 8 chr15 64497337 64497588 -38997386 - Lx5 LINE L1 -943 6107 5850 8 1077 1247 189 0 1 chr15 64497587 64497822 -38997152 + L1_Mur3 LINE L1 3915 4180 -1966 8 1077 1167 82 7 0 chr15 64497822 64497969 -38997005 - B1_Mus1 SINE Alu 0 148 1 8 1077 229 388 8 33 chr15 64498206 64498326 -38996648 + MIRc SINE MIR 38 154 -114 8 1077 1563 228 176 17 chr15 64499266 64499744 -38995230 - RMER15 LTR ERVL 0 575 22 8 1077 213 119 0 0 chr15 64499761 64499803 -38995171 + (T)n Simple_repeat Simple_repeat 1 42 0 8 1077 202 348 79 14 chr15 64501003 64501143 -38993831 - MIR3 SINE MIR -6 202 54 1 1077 392 278 141 23 chr15 64501677 64501854 -38993120 + MLT1A LTR MaLR 176 373 -1 2 1077 658 198 12 0 chr15 64502250 64502417 -38992557 + CT-rich Low_complexity Low_complexity 2 170 0 3 1077 338 176 108 0 chr15 64502423 64502497 -38992477 - B1_Mur4 SINE Alu -1 149 68 4 1077 320 303 141 47 chr15 64502597 64502746 -38992228 - RSINE1 SINE B4 0 165 3 5 1077 1093 283 150 37 chr15 64503209 64503837 -38991137 - L1MC1 LINE L1 -19 6314 5616 6 1077 21808 57 2 1 chr15 64504075 64507519 -38987455 - L1Md_F2 LINE L1 0 6582 3136 7 1077 21779 60 1 1 chr15 64507709 64511154 -38983820 - L1Md_F2 LINE L1 0 6582 3136 8 1077 21656 62 1 2 chr15 64511345 64514794 -38980180 - L1Md_F2 LINE L1 0 6582 3136 9 1077 230 310 11 11 chr15 64515202 64515290 -38979684 - LTR89 LTR ERVL? -541 338 251 1 1077 267 161 0 0 chr15 64515831 64515887 -38979087 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1077 360 116 87 0 chr15 64515896 64515965 -38979009 + HAL1-3A_ME LINE L1 1953 2027 -831 1 1077 348 111 0 0 chr15 64515965 64516019 -38978955 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1077 240 35 0 0 chr15 64516118 64516147 -38978827 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1077 584 212 0 0 chr15 64516345 64516458 -38978516 - RSINE1 SINE B4 -41 124 12 1 1077 677 176 7 0 chr15 64516517 64516659 -38978315 + CT-rich Low_complexity Low_complexity 4 146 0 1 1077 1644 272 52 25 chr15 64517257 64517774 -38977200 + Lx8 LINE L1 6938 7468 -5 1 1077 285 29 0 0 chr15 64518119 64518153 -38976821 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1077 2118 81 15 45 chr15 64519290 64519346 -38975628 - ORR1A2 LTR MaLR 0 327 286 1 1077 4955 62 13 6 chr15 64519346 64519977 -38974997 - L1Md_F2 LINE L1 0 6582 5948 2 1077 2118 81 15 45 chr15 64519977 64520257 -38974717 - ORR1A2 LTR MaLR -42 285 1 1 1077 779 316 12 76 chr15 64520319 64520648 -38974326 - LTR55 LTR ERV -235 313 6 2 1077 2061 114 9 0 chr15 64521215 64521531 -38973443 + ORR1A2 LTR MaLR 1 319 -8 2 1077 1171 271 26 41 chr15 64522486 64522948 -38972026 - L1MA8 LINE L1 -2 6289 5835 2 1077 479 286 34 0 chr15 64523710 64523857 -38971117 + B3A SINE B2 1 152 -46 2 1077 315 49 0 0 chr15 64523867 64523908 -38971066 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1077 326 302 46 28 chr15 64524232 64524341 -38970633 + PB1D10 SINE Alu 1 111 -6 2 1077 362 21 21 0 chr15 64524499 64524546 -38970428 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1077 201 132 0 0 chr15 64524555 64524593 -38970381 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 1077 1184 288 72 21 chr15 64524608 64525041 -38969933 + MTE-int LTR MaLR 1092 1546 -34 2 1077 231 349 0 15 chr15 64526492 64526623 -38968351 + (TG)n Simple_repeat Simple_repeat 1 129 0 3 1077 1461 227 37 24 chr15 64526639 64527013 -38967961 + MTE2a LTR MaLR 1 379 0 3 1077 734 234 58 111 chr15 64528584 64528998 -38965976 - MTD LTR MaLR -17 402 41 3 1077 194 323 151 0 chr15 64529661 64529754 -38965220 + L2 LINE L2 2976 3082 -337 3 1077 675 46 0 0 chr15 64529858 64529945 -38965029 + (TC)n Simple_repeat Simple_repeat 2 88 0 3 1077 800 199 64 6 chr15 64529962 64530134 -38964840 - B3A SINE B2 -16 182 1 3 1077 30 77 0 0 chr15 64530602 64530667 -38964307 + AT_rich Low_complexity Low_complexity 1 65 0 3 1077 201 74 0 0 chr15 64531542 64531569 -38963405 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1077 553 80 11 11 chr15 64531719 64531808 -38963166 + (TA)n Simple_repeat Simple_repeat 1 89 0 3 1077 525 355 32 5 chr15 64534201 64534419 -38960555 - MER58A DNA MER1_type 0 224 1 3 1077 228 242 0 31 chr15 64534602 64534666 -38960308 - MIRb SINE MIR -61 207 146 4 1077 781 150 6 12 chr15 64534709 64534871 -38960103 + (CCA)n Simple_repeat Simple_repeat 2 162 0 4 1077 1829 191 154 44 chr15 64535095 64535621 -38959353 - RLTR31A_Mm LTR ERVK 0 584 1 4 1077 411 284 111 0 chr15 64535937 64536099 -38958875 + L1MA7 LINE L1 6024 6203 -88 4 1077 359 230 544 12 chr15 64536532 64536701 -38958273 - MLT1A LTR MaLR -17 391 133 4 1077 2034 160 43 81 chr15 64537314 64537361 -38957613 - MTB_Mm LTR MaLR 0 407 365 4 1077 396 0 0 0 chr15 64537361 64537405 -38957569 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1077 2034 160 43 81 chr15 64537405 64537778 -38957196 - MTB_Mm LTR MaLR -43 364 3 4 1077 255 348 34 34 chr15 64538996 64539115 -38955859 + LTR16C LTR ERVL 103 221 -268 4 1077 321 291 154 25 chr15 64539714 64539915 -38955059 - MIRc SINE MIR -5 263 37 4 1077 237 282 25 13 chr15 64540508 64540587 -38954387 - MLT1B LTR MaLR -305 85 6 4 1077 1002 98 0 0 chr15 64540674 64540817 -38954157 - B1_Mus1 SINE Alu 0 148 6 5 1077 392 357 90 4 chr15 64541100 64541345 -38953629 - B4A SINE B4 -2 290 25 5 1077 498 306 80 31 chr15 64541403 64541629 -38953345 - MIR SINE MIR -14 248 12 5 1077 3641 37 39 17 chr15 64542585 64543050 -38951924 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1077 405 282 99 22 chr15 64545727 64545908 -38949066 + MLT1C LTR MaLR 71 265 -202 5 1077 183 231 0 0 chr15 64546029 64546068 -38948906 - L2b LINE L2 -16 3359 3321 5 1077 2790 135 179 0 chr15 64546088 64546584 -38948390 - RMER4B LTR ERVK 0 585 1 5 1077 268 200 0 23 chr15 64546632 64546719 -38948255 + (TA)n Simple_repeat Simple_repeat 1 85 0 5 1077 625 248 154 58 chr15 64546730 64547250 -38947724 - L1MB3 LINE L1 -3 6180 5622 5 1077 538 333 24 76 chr15 64548062 64548445 -38946529 + MLT1A LTR MaLR 1 363 -11 5 1077 217 239 57 86 chr15 64548675 64548780 -38946194 - MIRb SINE MIR -153 115 14 6 1077 1234 48 0 0 chr15 64548961 64549107 -38945867 + B1_Mm SINE Alu 1 146 -1 6 1077 455 267 65 20 chr15 64549406 64549559 -38945415 + L1MC4a LINE L1 5685 5844 -2038 6 1077 457 292 29 0 chr15 64549857 64549994 -38944980 + ID_B1 SINE B4 84 224 0 6 1077 543 122 0 0 chr15 64549994 64550084 -38944890 + (CAAAG)n Simple_repeat Simple_repeat 5 94 0 6 1077 1891 34 39 0 chr15 64550112 64550345 -38944629 + L1Md_F3 LINE L1 6343 6584 0 6 1077 400 279 138 53 chr15 64550870 64551543 -38943431 + L1MC4a LINE L1 7060 7789 -172 6 1077 248 0 0 96 chr15 64551977 64552029 -38942945 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 6 1077 794 30 0 0 chr15 64552031 64552131 -38942843 - B1_Mm SINE Alu 0 147 48 6 1077 207 0 0 0 chr15 64554559 64554582 -38940392 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1077 194 256 50 25 chr15 64554731 64554811 -38940163 + MIR SINE MIR 111 192 -70 6 1077 3548 45 22 16 chr15 64555070 64555519 -38939455 - L1Md_F2 LINE L1 0 6582 6131 7 1077 564 193 74 16 chr15 64555759 64555880 -38939094 + Lx9 LINE L1 7262 7389 -255 7 1077 567 290 141 14 chr15 64556173 64556485 -38938489 + ORR1E LTR MaLR 1 377 -2 7 1077 193 333 58 0 chr15 64556546 64556615 -38938359 - MIRb SINE MIR -82 186 114 7 1077 268 286 80 62 chr15 64557726 64557838 -38937136 - L2c LINE L2 -23 3364 3251 7 1077 2670 42 9 3 chr15 64558042 64558378 -38936596 + ORR1A0 LTR MaLR 1 338 -8 7 1077 504 86 0 0 chr15 64558493 64558563 -38936411 + (TCCC)n Simple_repeat Simple_repeat 1 70 0 7 1077 317 318 118 19 chr15 64558597 64558794 -38936180 + MIRb SINE MIR 22 231 -37 7 1077 267 314 101 7 chr15 64559855 64560000 -38934974 - MIR3 SINE MIR -54 154 3 7 1077 3532 286 87 30 chr15 64560190 64561789 -38933185 + Lx8 LINE L1 5638 7327 -146 7 1077 2389 131 13 0 chr15 64561803 64562170 -38932804 + Lx2 LINE L1 6610 6981 -16 8 1077 267 31 0 0 chr15 64562170 64562202 -38932772 + (CAA)n Simple_repeat Simple_repeat 2 33 0 8 1077 2389 131 13 0 chr15 64562202 64562216 -38932758 + Lx2 LINE L1 6982 6995 -2 8 1077 311 222 0 12 chr15 64562872 64562954 -38932020 + CT-rich Low_complexity Low_complexity 5 85 0 8 1077 252 284 78 22 chr15 64563000 64563090 -38931884 - MER45A DNA Tip100 -31 147 53 8 1077 189 0 0 0 chr15 64563265 64563286 -38931688 + (T)n Simple_repeat Simple_repeat 1 21 0 8 1077 303 407 0 69 chr15 64564895 64565069 -38929905 - MIR SINE MIR -86 176 15 8 1077 190 300 55 55 chr15 64565460 64565587 -38929387 + L3 LINE CR1 940 1066 -3423 8 1077 308 384 61 53 chr15 64565768 64566013 -38928961 + MLT1A LTR MaLR 1 247 -127 8 1077 704 276 110 26 chr15 64566324 64566816 -38928158 + L1MA8 LINE L1 5752 6284 -7 8 1077 488 310 78 46 chr15 64567545 64567826 -38927148 + B4A SINE B4 2 291 -1 8 1077 258 228 204 19 chr15 64568450 64568553 -38926421 + LTR16D LTR ERVL 530 651 0 9 1077 22 0 0 0 chr15 64568750 64568772 -38926202 + AT_rich Low_complexity Low_complexity 1 22 0 9 1077 553 272 8 0 chr15 64569375 64569500 -38925474 - B3 SINE B2 -90 126 1 9 1077 220 260 78 94 chr15 64569688 64569727 -38925247 - B2_Mm1a SINE B2 0 193 7 9 1077 601 325 46 0 chr15 64569727 64569878 -38925096 - RSINE1 SINE B4 0 165 8 9 1077 231 88 0 0 chr15 64571817 64571851 -38923123 + (TG)n Simple_repeat Simple_repeat 1 34 0 9 1077 618 309 154 32 chr15 64571920 64573234 -38921740 - L1MEc LINE L1 -4867 1533 59 9 1077 237 178 0 0 chr15 64574240 64574285 -38920689 + (TA)n Simple_repeat Simple_repeat 2 46 0 9 1077 315 0 0 0 chr15 64574519 64574554 -38920420 + (TG)n Simple_repeat Simple_repeat 1 35 0 9 1077 231 316 30 10 chr15 64574592 64574691 -38920283 - MIRb SINE MIR -51 217 117 9 1077 222 239 139 12 chr15 64574840 64574957 -38920017 - MIRc SINE MIR -21 247 105 1 1077 712 173 12 12 chr15 64575827 64575991 -38918983 + CT-rich Low_complexity Low_complexity 1 164 0 1 1077 311 305 18 35 chr15 64576137 64576307 -38918667 + GA-rich Low_complexity Low_complexity 3 169 0 1 1077 216 204 0 0 chr15 64576501 64576545 -38918429 + A-rich Low_complexity Low_complexity 1 44 0 1 1077 573 261 69 26 chr15 64576962 64577164 -38917810 - MIRb SINE MIR -45 223 11 1 1077 331 254 420 39 chr15 64577755 64577907 -38917067 + MIRb SINE MIR 53 262 -6 1 1077 520 253 13 33 chr15 64577989 64578140 -38916834 + MIRb SINE MIR 94 241 -27 1 1077 582 15 0 0 chr15 64578819 64578886 -38916088 + (TTCC)n Simple_repeat Simple_repeat 4 70 0 1 1077 2220 173 42 5 chr15 64579755 64580161 -38914813 - MTC LTR MaLR 0 421 1 1 1077 216 0 0 0 chr15 64583374 64583398 -38911576 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 1077 467 335 20 20 chr15 64583403 64583555 -38911419 - B3A SINE B2 -45 153 2 1 1077 201 235 0 38 chr15 64583555 64583608 -38911366 - MIRm SINE MIR -117 159 109 1 1077 201 333 0 13 chr15 64583673 64583749 -38911225 + CT-rich Low_complexity Low_complexity 1 75 0 1 1077 358 324 31 46 chr15 64584349 64584608 -38910366 - L1MC5 LINE L1 -697 7264 7010 1 1077 246 32 0 0 chr15 64584773 64584804 -38910170 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1077 1961 148 8 88 chr15 64584915 64585300 -38909674 + ORR1B1 LTR MaLR 41 394 0 1 1077 689 359 83 50 chr15 64585317 64585760 -38909214 - MLT2B3 LTR ERVL -96 458 1 1 1077 206 116 0 23 chr15 64586533 64586577 -38908397 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 1077 343 132 14 14 chr15 64587478 64587547 -38907427 + C-rich Low_complexity Low_complexity 6 74 0 1 1077 453 36 0 0 chr15 64588212 64588267 -38906707 + (CAG)n Simple_repeat Simple_repeat 1 55 0 1 1077 336 321 58 48 chr15 64589150 64589356 -38905618 + MIR SINE MIR 17 224 -38 1 1077 207 0 0 0 chr15 64589958 64589981 -38904993 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1 1077 700 111 17 0 chr15 64590122 64590239 -38904735 + (TTTC)n Simple_repeat Simple_repeat 1 119 0 1 1077 270 132 0 0 chr15 64590239 64590277 -38904697 + (TCCC)n Simple_repeat Simple_repeat 1 38 0 1 1077 968 25 0 8 chr15 64590279 64590341 -38904633 + (TTTC)n Simple_repeat Simple_repeat 2 62 0 1 1077 1076 98 0 12 chr15 64590341 64590506 -38904468 + (TCCC)n Simple_repeat Simple_repeat 3 165 0 1 1077 968 25 0 8 chr15 64590506 64590565 -38904409 + (TTTC)n Simple_repeat Simple_repeat 3 61 0 1 1077 1040 101 0 12 chr15 64590565 64590726 -38904248 + (TCCC)n Simple_repeat Simple_repeat 3 161 0 1 1077 657 0 0 0 chr15 64590726 64590799 -38904175 + (TTTC)n Simple_repeat Simple_repeat 4 76 0 1 1077 1146 64 0 0 chr15 64590801 64590941 -38904033 - B1_Mm SINE Alu -6 141 2 1 1077 298 347 83 7 chr15 64593012 64593157 -38901817 + MIRb SINE MIR 88 243 -25 1 1077 210 302 57 23 chr15 64593296 64593384 -38901590 - MIRc SINE MIR -151 117 27 1 1077 202 302 159 0 chr15 64593330 64593393 -38901581 + MIRm SINE MIR 157 229 -47 1 1077 324 322 25 33 chr15 64593860 64593982 -38900992 - B4A SINE B4 -170 122 2 1 1077 195 42 0 0 chr15 64594444 64594468 -38900506 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1077 529 339 58 68 chr15 64595501 64595795 -38899179 - B4 SINE B4 0 292 2 1 1077 386 121 15 0 chr15 64596532 64596598 -38898376 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1077 1039 266 51 139 chr15 64598322 64598732 -38896242 + MTE2b LTR MaLR 1 374 -5 1 1077 231 339 99 0 chr15 64598753 64598874 -38896100 - MIR3 SINE MIR -53 155 23 1 1077 292 360 0 0 chr15 64601507 64601582 -38893392 - ID4 SINE ID -1 82 8 1 1077 196 374 44 0 chr15 64604509 64604600 -38890374 + L2c LINE L2 3250 3344 -43 1 1077 241 384 9 0 chr15 64606568 64606680 -38888294 + LTR84a LTR ERVL 584 696 -61 1 1077 324 0 0 0 chr15 64608525 64608561 -38886413 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1077 270 316 78 45 chr15 64608714 64608956 -38886018 + Charlie19a DNA Charlie 132 381 -5 1 1077 356 326 20 14 chr15 64609151 64609297 -38885677 + B1F1 SINE Alu 3 149 0 1 1077 242 224 29 29 chr15 64609310 64609379 -38885595 + ID4 SINE ID 1 69 -14 1 1077 23 0 0 0 chr15 64611936 64611959 -38883015 + AT_rich Low_complexity Low_complexity 1 23 0 1 1077 205 167 0 0 chr15 64612980 64613016 -38881958 + CT-rich Low_complexity Low_complexity 4 39 0 1 1077 801 224 0 14 chr15 64614488 64614633 -38880341 + B1_Mur1 SINE Alu 5 147 -2 1 1077 213 39 0 0 chr15 64614638 64614664 -38880310 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1 1077 432 0 0 0 chr15 64614973 64615021 -38879953 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 1 1077 460 303 82 35 chr15 64616299 64616523 -38878451 + MIR SINE MIR 3 246 -22 1 1077 399 349 17 40 chr15 64618204 64618380 -38876594 + MER5A DNA MER1_type 15 186 -3 1 134 208 318 166 20 chr15 64618476 64618627 -38876347 + MER5B DNA MER1_type 1 173 -5 1 1078 252 0 0 0 chr15 64620117 64620145 -38874829 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1078 519 336 22 49 chr15 64620290 64620515 -38874459 + Tigger5 DNA MER2_type 11 229 -2177 1 1078 305 307 108 10 chr15 64620529 64620631 -38874343 + Tigger5 DNA MER2_type 2295 2406 0 1 1078 304 138 171 24 chr15 64620854 64620936 -38874038 + Lx9 LINE L1 7068 7161 -483 1 1078 3018 41 0 0 chr15 64622100 64622475 -38872499 + L1Md_T LINE L1 6240 6582 0 1 1078 250 301 93 55 chr15 64623875 64624058 -38870916 + MIRb SINE MIR 74 263 -5 1 1078 21 0 0 0 chr15 64624070 64624091 -38870883 + AT_rich Low_complexity Low_complexity 1 21 0 1 1078 340 346 106 30 chr15 64625907 64626238 -38868736 - MLT1A0 LTR MaLR 0 365 10 1 1078 22 0 0 0 chr15 64626252 64626274 -38868700 + AT_rich Low_complexity Low_complexity 1 22 0 1 1078 894 118 0 0 chr15 64626812 64626964 -38868010 + (CA)n Simple_repeat Simple_repeat 2 153 0 1 1078 8125 49 3 6 chr15 64627482 64628731 -38866243 - L1Md_F2 LINE L1 0 6582 5337 1 1078 230 286 71 116 chr15 64628853 64629078 -38865896 + MIR SINE MIR 43 257 -5 1 1078 892 269 136 47 chr15 64629139 64629478 -38865496 + MTEa LTR MaLR 4 372 -7 1 1078 289 136 15 15 chr15 64629583 64629621 -38865353 + polypurine Low_complexity Low_complexity 2 40 0 1 1078 1115 72 0 43 chr15 64629621 64629809 -38865165 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 1 1078 289 136 15 15 chr15 64629809 64629837 -38865137 + polypurine Low_complexity Low_complexity 41 68 0 1 1078 255 310 20 10 chr15 64629839 64629962 -38865012 + GA-rich Low_complexity Low_complexity 1 124 0 1 1078 209 307 26 13 chr15 64630750 64630826 -38864148 + MIR SINE MIR 67 143 -119 1 1078 509 311 49 27 chr15 64631218 64631403 -38863571 + B3A SINE B2 4 192 -6 1 1078 203 269 98 36 chr15 64631496 64631608 -38863366 - MIRb SINE MIR -114 154 36 1 1078 260 292 0 48 chr15 64631996 64632122 -38862852 + (CATATA)n Simple_repeat Simple_repeat 3 122 0 1 1078 1780 199 103 5 chr15 64632134 64632513 -38862461 - Lx5 LINE L1 -1 7049 6634 1 1078 2460 169 64 16 chr15 64632514 64632966 -38862008 + Lx5 LINE L1 6166 6639 -411 1 1078 215 75 0 70 chr15 64633160 64633203 -38861771 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 1 1078 450 0 0 0 chr15 64633665 64633715 -38861259 + (TTG)n Simple_repeat Simple_repeat 1 50 0 1 1078 533 340 0 36 chr15 64633743 64633911 -38861063 - RSINE1 SINE B4 -1 164 3 1 1078 7153 56 0 6 chr15 64633982 64634831 -38860143 - L1Md_F2 LINE L1 0 6582 5739 1 1078 921 272 174 9 chr15 64634844 64635281 -38859693 - L1MA8 LINE L1 0 6291 5783 1 1078 759 119 0 0 chr15 64636681 64636807 -38858167 + (TA)n Simple_repeat Simple_repeat 2 127 0 1 1078 240 258 0 0 chr15 64636810 64636872 -38858102 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 1078 795 282 2 36 chr15 64636872 64637083 -38857891 - B3A SINE B2 -7 209 8 1 1078 1189 82 0 7 chr15 64637280 64637428 -38857546 - B1_Mus1 SINE Alu 0 148 2 1 1078 183 80 0 0 chr15 64637943 64637968 -38857006 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1078 237 245 135 58 chr15 64639343 64639447 -38855527 - MER67C LTR ERV1 -436 275 164 1 1078 599 288 5 12 chr15 64639995 64640157 -38854817 + ID_B1 SINE B4 67 217 -7 1 1078 461 115 0 13 chr15 64640168 64640247 -38854727 + (GGA)n Simple_repeat Simple_repeat 2 79 0 1 1078 451 297 7 21 chr15 64640457 64640598 -38854376 - L1MA4A LINE L1 -380 5923 5785 1 1078 240 130 0 0 chr15 64640602 64640648 -38854326 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 1078 378 0 0 0 chr15 64640741 64640783 -38854191 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1078 360 0 0 0 chr15 64640783 64640822 -38854152 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 1078 1491 61 0 0 chr15 64641488 64641668 -38853306 - L1Md_F2 LINE L1 -133 6449 6270 1 1078 1184 51 38 0 chr15 64641668 64641825 -38853149 + L1Md_A LINE L1 6419 6581 -1 1 1078 547 48 24 0 chr15 64642263 64642346 -38852628 + (TCTA)n Simple_repeat Simple_repeat 4 88 0 1 1078 203 243 27 36 chr15 64642354 64642465 -38852509 + (TA)n Simple_repeat Simple_repeat 2 111 0 1 1078 182 238 0 23 chr15 64643025 64643068 -38851906 + L3 LINE CR1 2327 2368 -2121 1 1078 614 252 95 0 chr15 64644330 64644477 -38850497 - B4 SINE B4 -131 161 1 1 1078 191 303 114 76 chr15 64645852 64645984 -38848990 + L2c LINE L2 3112 3248 -139 1 1078 33 43 0 0 chr15 64649193 64649240 -38845734 + AT_rich Low_complexity Low_complexity 1 47 0 1 1078 285 98 0 0 chr15 64649436 64649477 -38845497 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1078 378 0 0 0 chr15 64650148 64650190 -38844784 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1078 3574 33 5 0 chr15 64650205 64650599 -38844375 + MTA_Mm LTR MaLR 1 396 0 2 1078 9112 44 3 59 chr15 64650599 64651763 -38843211 + MTA_Mm-int LTR MaLR 1 1098 0 2 1078 3642 25 5 0 chr15 64651763 64652157 -38842817 + MTA_Mm LTR MaLR 1 396 0 2 1078 2382 40 4 0 chr15 64652695 64652971 -38842003 - L1Md_F2 LINE L1 0 6582 6306 2 1078 219 359 75 31 chr15 64652988 64653149 -38841825 - MIRb SINE MIR -50 218 51 2 1078 237 344 0 10 chr15 64653244 64653341 -38841633 + (TGGA)n Simple_repeat Simple_repeat 3 98 0 2 1078 215 303 53 0 chr15 64655513 64655589 -38839385 + MIR SINE MIR 112 191 -71 2 1078 565 270 24 8 chr15 64656720 64656847 -38838127 - B3A SINE B2 -69 129 1 2 1078 825 250 45 5 chr15 64656876 64657077 -38837897 + B3 SINE B2 5 213 -3 2 1078 198 325 35 35 chr15 64657252 64657338 -38837636 - MIRm SINE MIR 0 276 191 2 1078 212 0 36 0 chr15 64658068 64658096 -38836878 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 2 1078 1001 267 52 26 chr15 64658850 64659374 -38835600 + Lx7 LINE L1 5427 5989 -1655 2 1078 1849 116 54 48 chr15 64659393 64659709 -38835265 + ORR1A3 LTR MaLR 1 318 -8 2 1078 620 21 54 0 chr15 64659713 64659806 -38835168 + (TCTA)n Simple_repeat Simple_repeat 2 99 0 2 1078 739 284 53 14 chr15 64659977 64660233 -38834741 + Lx7 LINE L1 6072 6339 -1134 2 1078 291 54 0 0 chr15 64661045 64661082 -38833892 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1078 342 0 0 0 chr15 64662418 64662456 -38832518 + (GA)n Simple_repeat Simple_repeat 2 39 0 2 1078 303 28 0 0 chr15 64662460 64662496 -38832478 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1078 404 354 54 112 chr15 64662542 64662819 -38832155 - B4 SINE B4 -1 291 31 2 1078 196 247 56 90 chr15 64663107 64663196 -38831778 + L2a LINE L2 3336 3421 -5 2 1078 365 272 144 10 chr15 64664332 64664436 -38830538 + PB1D7 SINE Alu 3 120 0 2 1078 1860 153 96 62 chr15 64664587 64664942 -38830032 + ORR1B2 LTR MaLR 1 367 0 2 1078 1400 195 211 14 chr15 64665264 64665542 -38829432 - RMER1C Other Other -1 1341 1008 2 1078 360 0 0 0 chr15 64665542 64665582 -38829392 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1078 1400 195 211 14 chr15 64665582 64665667 -38829307 - RMER1C Other Other -335 1007 906 2 1078 189 0 0 0 chr15 64665676 64665697 -38829277 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 2 1078 183 42 0 0 chr15 64665704 64665728 -38829246 + (CCAA)n Simple_repeat Simple_repeat 4 27 0 2 1078 359 268 221 6 chr15 64665785 64665943 -38829031 - RMER1C Other Other -433 909 718 2 1078 189 94 0 0 chr15 64666883 64666915 -38828059 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 1078 21 0 0 0 chr15 64666945 64666966 -38828008 + AT_rich Low_complexity Low_complexity 1 21 0 2 1078 275 314 75 41 chr15 64667207 64667353 -38827621 + MIRb SINE MIR 113 263 -5 2 1078 245 221 125 38 chr15 64667662 64667742 -38827232 + MIR SINE MIR 60 146 -116 2 1078 225 0 0 0 chr15 64668179 64668204 -38826770 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 1078 252 348 96 36 chr15 64668233 64668400 -38826574 + MER97c DNA MER1_type? 1 177 -913 2 1078 663 352 25 43 chr15 64668907 64669233 -38825741 + MLT2D LTR ERVL 39 358 -56 2 1078 217 355 22 22 chr15 64670248 64670340 -38824634 - MIRm SINE MIR -135 141 50 2 1078 299 351 42 11 chr15 64670419 64670514 -38824460 - PB1D7 SINE Alu -22 98 1 2 1078 294 183 0 0 chr15 64671881 64671952 -38823022 + (CATATA)n Simple_repeat Simple_repeat 3 73 0 2 1078 618 14 0 0 chr15 64671982 64672053 -38822921 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 2 1078 241 291 0 10 chr15 64673076 64673180 -38821794 + (TA)n Simple_repeat Simple_repeat 2 104 0 2 1078 3862 39 2 0 chr15 64674445 64674933 -38820041 - L1Md_F2 LINE L1 -507 6075 5587 2 1078 3970 40 2 4 chr15 64674946 64675423 -38819551 + L1Md_F2 LINE L1 6098 6573 -9 2 1078 351 274 56 8 chr15 64675490 64675615 -38819359 - Lx9 LINE L1 -463 7181 7051 2 1078 750 195 70 17 chr15 64675652 64675824 -38819150 - Lx9 LINE L1 -268 7376 7196 2 1078 264 179 62 21 chr15 64675863 64675960 -38819014 + (TCTA)n Simple_repeat Simple_repeat 1 101 0 2 1078 601 80 86 23 chr15 64675973 64676101 -38818873 + Lx9 LINE L1 7508 7643 -1 2 1078 7475 58 1 5 chr15 64677348 64677755 -38817219 - L1_Mus1 LINE L1 0 6567 6164 2 1078 2739 48 3 3 chr15 64677755 64678086 -38816888 + IAPEY3_LTR LTR ERVK 1 331 -1 2 1078 29649 92 13 2 chr15 64678086 64681028 -38813946 - L1_Mus1 LINE L1 -404 6163 3180 2 1078 210 37 0 0 chr15 64681028 64681055 -38813919 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1078 29649 100 16 2 chr15 64681055 64681303 -38813671 - L1_Mus1 LINE L1 -2704 3179 2930 2 1078 3494 23 2 0 chr15 64681303 64681698 -38813276 + MTA_Mm LTR MaLR 1 396 0 2 1078 29649 128 37 7 chr15 64681698 64684357 -38810617 - L1_Mus1 LINE L1 -2954 2929 187 2 1078 221 355 0 0 chr15 64684440 64684516 -38810458 + CT-rich Low_complexity Low_complexity 1 76 0 2 1078 517 273 8 0 chr15 64684518 64684646 -38810328 - B1_Mur2 SINE Alu 0 149 21 2 1078 3135 149 67 65 chr15 64684902 64685589 -38809385 + RMER6C LTR ERVK 3 690 0 2 1078 504 281 67 0 chr15 64685752 64685887 -38809087 + B1F SINE Alu 5 148 -1 2 1078 223 333 130 24 chr15 64685989 64686112 -38808862 - MIRb SINE MIR -27 241 106 2 1078 189 0 0 0 chr15 64686179 64686200 -38808774 + (TTTTTG)n Simple_repeat Simple_repeat 6 26 0 2 1078 382 293 43 109 chr15 64687309 64687520 -38807454 - MLT1C LTR MaLR -212 255 59 2 1078 706 268 46 37 chr15 64687693 64687910 -38807064 + ID_B1 SINE B4 3 221 -3 2 1078 189 0 0 0 chr15 64688496 64688517 -38806457 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 2 1078 236 278 28 119 chr15 64689694 64689837 -38805137 + RMER15 LTR ERVL 1 130 -445 2 1078 218 75 50 0 chr15 64689853 64689893 -38805081 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 2 1078 360 279 57 8 chr15 64689969 64690092 -38804882 + RMER15 LTR ERVL 433 561 -14 2 1078 295 333 11 0 chr15 64690417 64690510 -38804464 + B4A SINE B4 4 97 -195 2 1078 614 279 141 16 chr15 64691344 64691526 -38803448 + B4A SINE B4 2 213 -79 2 1078 675 97 0 0 chr15 64691526 64691640 -38803334 + (CAAG)n Simple_repeat Simple_repeat 3 116 0 2 1078 614 279 141 16 chr15 64691640 64691712 -38803262 + B4A SINE B4 214 287 -5 2 1078 536 0 16 0 chr15 64691800 64691864 -38803110 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 2 1078 181 245 57 0 chr15 64692137 64692190 -38802784 + L3 LINE CR1 1899 1954 -2535 2 1078 21 0 0 0 chr15 64692237 64692258 -38802716 + AT_rich Low_complexity Low_complexity 1 21 0 2 1078 25 31 0 0 chr15 64693279 64693311 -38801663 + AT_rich Low_complexity Low_complexity 1 32 0 2 1078 1555 186 58 88 chr15 64693739 64694104 -38800870 - ORR1B1 LTR MaLR 0 394 41 2 1078 405 178 42 0 chr15 64694117 64694203 -38800771 + ORR1E LTR MaLR 12 101 -258 2 1078 2828 50 6 3 chr15 64694203 64694560 -38800414 + L1_Mus1 LINE L1 6202 6559 -8 2 1078 940 56 97 14 chr15 64694577 64694722 -38800252 - L1Md_F2 LINE L1 -12 6570 6414 2 1078 25 51 0 0 chr15 64694731 64694770 -38800204 + AT_rich Low_complexity Low_complexity 1 39 0 2 1078 519 17 0 0 chr15 64694780 64694840 -38800134 + (GA)n Simple_repeat Simple_repeat 2 61 0 2 1078 868 252 34 92 chr15 64694840 64695049 -38799925 + ORR1E LTR MaLR 109 307 -52 2 1078 1916 169 25 33 chr15 64695049 64695417 -38799557 + ORR1B2 LTR MaLR 3 367 0 2 1078 868 252 34 92 chr15 64695417 64695469 -38799505 + ORR1E LTR MaLR 308 355 -4 2 1078 256 324 0 14 chr15 64695669 64695741 -38799233 + ID4_ SINE ID 4 74 -9 2 1078 265 336 60 45 chr15 64695743 64695834 -38799140 + ID_B1 SINE B4 79 175 -49 2 1078 1929 173 47 23 chr15 64695834 64696219 -38798755 - ORR1B1 LTR MaLR 0 394 1 2 1078 265 336 60 45 chr15 64696219 64696261 -38798713 + ID_B1 SINE B4 176 214 -10 2 1078 740 72 0 0 chr15 64696336 64696433 -38798541 - L1_Mus2 LINE L1 -317 6249 6153 2 1078 1326 80 53 0 chr15 64696433 64696620 -38798354 + L1_Mus2 LINE L1 6370 6566 0 2 1078 920 57 7 21 chr15 64696633 64696776 -38798198 + (GGAA)n Simple_repeat Simple_repeat 4 144 0 2 1078 279 0 0 0 chr15 64698113 64698144 -38796830 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1078 1780 191 108 8 chr15 64698144 64698525 -38796449 + MTC LTR MaLR 1 419 -2 2 1078 567 228 35 40 chr15 64698583 64698757 -38796217 - Lx9 LINE L1 -206 7438 7266 2 1078 286 283 131 16 chr15 64699923 64700045 -38794929 - MIRb SINE MIR -100 168 33 2 1078 2453 212 54 13 chr15 64700248 64700782 -38794192 + RLTR20B2 LTR ERVK 1 556 -4 2 1078 322 0 0 0 chr15 64700825 64700869 -38794105 - L1_Mus2 LINE L1 0 6566 6523 2 1078 342 129 0 0 chr15 64701258 64701320 -38793654 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1078 491 211 6 22 chr15 64701343 64701522 -38793452 + (CATATA)n Simple_repeat Simple_repeat 2 177 0 2 1078 365 256 0 0 chr15 64701523 64701605 -38793369 + (CA)n Simple_repeat Simple_repeat 1 82 0 2 1078 1708 93 12 4 chr15 64703583 64703841 -38791133 - L1_Mus2 LINE L1 0 6566 6307 2 1078 4077 49 2 2 chr15 64703913 64704444 -38790530 - L1Md_F3 LINE L1 -444 6140 5610 2 1078 500 70 11 23 chr15 64704444 64704532 -38790442 + L1Md_F2 LINE L1 6495 6581 -1 2 1078 467 290 0 0 chr15 64704655 64704762 -38790212 + PB1D7 SINE Alu 14 120 0 2 1078 279 342 0 37 chr15 64704814 64704896 -38790078 - ID4_ SINE ID -4 79 1 2 1078 5432 124 4 28 chr15 64705088 64706217 -38788757 + L1_Mur2 LINE L1 3224 4250 -1633 2 1078 1541 56 19 0 chr15 64706234 64706447 -38788527 + L1_Mus4 LINE L1 5794 6010 -628 2 1078 278 49 73 0 chr15 64706445 64706486 -38788488 - L1_Mus2 LINE L1 -238 6328 6285 2 1078 862 115 0 0 chr15 64706486 64706625 -38788349 + L1_Mus2 LINE L1 6428 6566 0 2 1078 4212 111 11 25 chr15 64706646 64707291 -38787683 + L1_Mus4 LINE L1 5998 6633 -3 2 1078 433 342 48 26 chr15 64707320 64707548 -38787426 + L1MEf LINE L1 669 901 -5341 2 1078 1903 208 74 76 chr15 64707616 64708184 -38786790 + RMER2 LTR ERV1 1 567 0 2 1078 264 311 87 31 chr15 64708254 64708450 -38786524 + L1MEf LINE L1 1159 1365 -4877 2 1078 1592 246 8 19 chr15 64708973 64709337 -38785637 + ORR1D2 LTR MaLR 3 362 -8 2 1078 338 349 113 19 chr15 64709357 64709783 -38785191 + L1MEf LINE L1 2806 3271 -2875 2 1078 276 232 117 74 chr15 64709932 64710095 -38784879 + L1MEf LINE L1 3479 3648 -2498 2 1078 227 316 0 0 chr15 64710107 64710164 -38784810 - ID_B1 SINE B4 -63 161 105 2 1078 294 308 0 0 chr15 64710258 64710378 -38784596 + L1MEf LINE L1 3744 3863 -2283 2 1078 240 312 0 0 chr15 64710600 64710664 -38784310 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 1078 511 317 62 50 chr15 64710668 64710910 -38784064 - B4A SINE B4 -4 288 44 2 1078 190 390 42 17 chr15 64710913 64711033 -38783941 + L2b LINE L2 3035 3157 -218 3 1078 378 0 0 0 chr15 64712543 64712585 -38782389 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1078 816 277 16 125 chr15 64712585 64712841 -38782133 - B4 SINE B4 -23 269 42 3 1078 288 356 0 34 chr15 64713531 64713649 -38781325 + MIR SINE MIR 27 136 -72 3 1078 452 331 78 57 chr15 64713675 64714049 -38780925 - ORR1E LTR MaLR 0 370 4 3 1078 2940 176 52 11 chr15 64714069 64714621 -38780353 + RMER15 LTR ERVL 1 575 0 3 1078 754 254 39 52 chr15 64714640 64714869 -38780105 + Lx6 LINE L1 7223 7448 -12 3 1078 233 319 143 14 chr15 64715275 64715415 -38779559 + MIRc SINE MIR 73 230 -38 3 1078 195 42 0 0 chr15 64715440 64715464 -38779510 + (TTA)n Simple_repeat Simple_repeat 2 25 0 3 1078 416 264 156 23 chr15 64715546 64715674 -38779300 - RSINE1 SINE B4 -13 152 8 3 1078 211 274 20 0 chr15 64716662 64716713 -38778261 - MIRc SINE MIR -145 123 72 3 1078 374 216 53 9 chr15 64716770 64716903 -38778071 + L1M2 LINE L1 5607 5744 -559 3 1078 7485 154 50 5 chr15 64717154 64719585 -38775389 + Lx5 LINE L1 4500 7047 -3 3 1078 6529 28 0 0 chr15 64719714 64720473 -38774501 - L1Md_F2 LINE L1 0 6582 5824 3 1078 192 294 124 45 chr15 64720541 64720630 -38774344 - L2a LINE L2 -25 3401 3306 3 1078 549 44 0 0 chr15 64720649 64720717 -38774257 + (GA)n Simple_repeat Simple_repeat 2 69 0 3 1078 188 361 36 12 chr15 64720825 64720909 -38774065 + MIRb SINE MIR 173 258 -10 3 1078 554 82 0 20 chr15 64720996 64721095 -38773879 + (TCTCTG)n Simple_repeat Simple_repeat 6 102 0 3 1078 306 0 0 0 chr15 64721095 64721129 -38773845 - HAL1-3A_ME LINE L1 -849 2009 1976 3 1078 1948 196 15 30 chr15 64721129 64721535 -38773439 - MTB_Mm LTR MaLR -7 400 1 3 1078 608 305 120 25 chr15 64721559 64721801 -38773173 - B4A SINE B4 -12 280 16 3 1078 252 200 117 0 chr15 64722289 64722349 -38772625 + LTR33 LTR ERVL 449 515 0 3 1078 315 104 0 0 chr15 64722433 64722481 -38772493 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1078 818 104 0 39 chr15 64722484 64722664 -38772310 + (CAGAGA)n Simple_repeat Simple_repeat 2 174 0 3 1078 330 288 133 58 chr15 64723842 64724030 -38770944 + MER20 DNA MER1_type 17 218 -1 3 1078 319 167 17 0 chr15 64724169 64724229 -38770745 - HAL1-3A_ME LINE L1 -823 2035 1975 3 1078 192 91 68 0 chr15 64724267 64724311 -38770663 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1078 473 292 22 39 chr15 64724355 64724386 -38770588 - B4A SINE B4 0 292 267 3 1078 258 32 0 0 chr15 64724386 64724417 -38770557 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1078 473 292 22 39 chr15 64724417 64724563 -38770411 - B4A SINE B4 -26 266 118 3 1078 1235 12 40 0 chr15 64725694 64725867 -38769107 + (TATG)n Simple_repeat Simple_repeat 1 180 0 3 1078 1806 196 45 19 chr15 64726255 64726634 -38768340 - MTC LTR MaLR 0 421 33 3 1078 360 158 0 0 chr15 64727826 64727902 -38767072 + GA-rich Low_complexity Low_complexity 3 78 0 3 1078 585 42 0 0 chr15 64727902 64727974 -38767000 + (GGAA)n Simple_repeat Simple_repeat 2 73 0 3 1078 346 412 50 32 chr15 64728032 64728250 -38766724 + LTR16A LTR ERVL 225 446 -5 3 1078 737 340 31 8 chr15 64729025 64729280 -38765694 - B4 SINE B4 -6 286 26 3 1078 22 35 0 0 chr15 64730011 64730040 -38764934 + AT_rich Low_complexity Low_complexity 1 29 0 3 1078 248 328 141 11 chr15 64730210 64730395 -38764579 + MIR SINE MIR 48 256 -6 3 1078 369 0 0 0 chr15 64731698 64731739 -38763235 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 3 1078 500 275 9 0 chr15 64731748 64731857 -38763117 - RSINE1 SINE B4 -53 112 3 3 1078 772 300 27 23 chr15 64732195 64732454 -38762520 + B4 SINE B4 5 264 -28 3 1078 288 0 0 0 chr15 64732510 64732542 -38762432 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 1078 243 0 0 0 chr15 64732542 64732568 -38762406 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 1078 414 0 0 0 chr15 64734247 64734293 -38760681 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1078 372 257 7 62 chr15 64734468 64734613 -38760361 + GA-rich Low_complexity Low_complexity 3 139 0 3 1078 515 0 46 0 chr15 64735100 64735165 -38759809 + (TTTTA)n Simple_repeat Simple_repeat 4 71 0 3 1078 274 292 143 21 chr15 64735457 64735597 -38759377 - L3 LINE CR1 -3 4486 4330 3 1078 371 295 0 0 chr15 64736026 64736121 -38758853 + PB1D10 SINE Alu 1 95 -22 3 1078 254 98 20 0 chr15 64736267 64736318 -38758656 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 3 1078 864 301 44 34 chr15 64736369 64736665 -38758309 + ORR1E LTR MaLR 61 359 0 3 1078 657 66 9 36 chr15 64737374 64737484 -38757490 + (TCTCCC)n Simple_repeat Simple_repeat 4 110 0 3 1078 363 0 16 66 chr15 64737806 64737867 -38757107 + (TTTA)n Simple_repeat Simple_repeat 1 58 0 3 1078 8447 59 32 4 chr15 64737870 64738946 -38756028 - L1_Mm LINE L1 -283 5600 4494 3 1078 351 0 0 0 chr15 64740662 64740701 -38754273 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1078 207 218 0 0 chr15 64740701 64740756 -38754218 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 1078 1469 182 83 15 chr15 64741515 64741839 -38753135 - Lx9 LINE L1 -392 7252 6907 3 1078 696 84 0 0 chr15 64741839 64741934 -38753040 + B1_Mus2 SINE Alu 53 147 0 3 1078 366 46 15 30 chr15 64741934 64742001 -38752973 + (CAAA)n Simple_repeat Simple_repeat 3 68 0 3 1078 500 92 58 0 chr15 64742034 64742121 -38752853 + Lx9 LINE L1 7552 7643 -1 3 1078 311 229 22 0 chr15 64742449 64742535 -38752439 - L2c LINE L2 -38 3349 3250 3 1078 189 0 0 0 chr15 64742940 64742961 -38752013 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1078 309 135 0 0 chr15 64744019 64744071 -38750903 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1078 660 59 0 0 chr15 64746515 64746600 -38748374 + (GA)n Simple_repeat Simple_repeat 1 85 0 3 1078 21 95 0 0 chr15 64747281 64747344 -38747630 + AT_rich Low_complexity Low_complexity 1 63 0 3 1078 492 18 0 0 chr15 64747653 64747710 -38747264 + (TC)n Simple_repeat Simple_repeat 1 57 0 3 1078 186 167 0 0 chr15 64747710 64747746 -38747228 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1079 183 42 0 0 chr15 64751158 64751182 -38743792 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 3 1079 396 0 0 0 chr15 64754252 64754296 -38740678 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1079 288 0 0 0 chr15 64755316 64755348 -38739626 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 1079 189 329 40 60 chr15 64756624 64756773 -38738201 - MIR SINE MIR -11 251 106 3 1079 210 37 0 0 chr15 64756938 64756965 -38738009 + (TTG)n Simple_repeat Simple_repeat 2 28 0 3 1079 21 36 0 0 chr15 64757087 64757115 -38737859 + AT_rich Low_complexity Low_complexity 1 28 0 3 1079 5992 210 127 37 chr15 64758170 64758916 -38736058 + Lx7 LINE L1 6065 6906 -790 3 1079 1125 123 0 0 chr15 64758916 64759095 -38735879 + (GA)n Simple_repeat Simple_repeat 1 179 0 3 1079 5992 210 127 37 chr15 64759095 64759470 -38735504 + Lx7 LINE L1 6907 7288 -408 3 1079 3458 104 28 2 chr15 64759470 64759963 -38735011 - L1_Mus3 LINE L1 -6 6632 6127 3 1079 5992 210 127 37 chr15 64759963 64760336 -38734638 + Lx7 LINE L1 7289 7695 -1 3 1079 360 273 31 79 chr15 64760489 64760716 -38734258 - Lx9 LINE L1 -24 7620 7405 3 1079 1845 260 110 42 chr15 64760714 64761315 -38733659 - Lx8 LINE L1 -86 7387 6746 3 1079 2327 52 7 3 chr15 64761883 64762175 -38732799 - L1Md_F2 LINE L1 0 6582 6290 3 1079 394 274 33 72 chr15 64762959 64763140 -38731834 - L1MB2 LINE L1 0 6171 5998 3 1079 506 311 184 40 chr15 64764016 64764391 -38730583 + MLT1F LTR MaLR 117 545 -3 3 1079 11346 104 48 11 chr15 64764527 64767329 -38727645 + L1VL2 LINE L1 67 2595 -1020 3 1079 917 127 68 19 chr15 64767368 64767529 -38727445 + MTC LTR MaLR 196 364 -57 3 1079 189 0 0 0 chr15 64767551 64767572 -38727402 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 3 1079 4496 85 5 15 chr15 64768252 64768870 -38726104 + L1_Mus3 LINE L1 6011 6622 -16 3 1079 390 101 0 0 chr15 64768890 64768959 -38726015 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 1079 790 128 0 37 chr15 64769369 64769556 -38725418 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1079 319 354 82 36 chr15 64770297 64770772 -38724202 + Kanga1 DNA Tc2 1249 1745 0 3 1079 378 0 0 0 chr15 64771225 64771267 -38723707 + (TCCCC)n Simple_repeat Simple_repeat 5 46 0 3 1079 1541 6 0 6 chr15 64771267 64771446 -38723528 + (TTTCC)n Simple_repeat Simple_repeat 3 180 0 3 1079 487 147 0 69 chr15 64771446 64771608 -38723366 + polypyrimidine Low_complexity Low_complexity 1 150 0 3 1079 1006 85 16 33 chr15 64771608 64771791 -38723183 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 3 1079 487 136 0 102 chr15 64771791 64771877 -38723097 + polypyrimidine Low_complexity Low_complexity 6 83 0 3 1079 225 0 0 0 chr15 64772200 64772225 -38722749 + (TTCC)n Simple_repeat Simple_repeat 1 25 0 3 1079 308 263 165 0 chr15 64772225 64772358 -38722616 - HAL1-3A_ME LINE L1 -420 2438 2284 3 1079 522 0 0 0 chr15 64772872 64772930 -38722044 + (TCTA)n Simple_repeat Simple_repeat 2 59 0 3 1079 370 0 40 0 chr15 64772989 64773039 -38721935 + (TCTA)n Simple_repeat Simple_repeat 4 55 0 3 1079 4890 169 66 78 chr15 64773039 64773130 -38721844 - RMER1A Other Other -12 1018 903 3 1079 489 34 0 0 chr15 64773130 64773189 -38721785 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 1079 4890 179 78 71 chr15 64773189 64774246 -38720728 - RMER1A Other Other -128 902 4 3 1079 323 230 0 0 chr15 64774560 64774634 -38720340 - MLT1A LTR MaLR 0 374 301 3 1079 241 372 0 42 chr15 64774747 64774865 -38720109 - MLT1A LTR MaLR -246 162 50 3 1079 26 0 0 0 chr15 64775522 64775548 -38719426 + AT_rich Low_complexity Low_complexity 1 26 0 3 1079 432 0 0 0 chr15 64775645 64775693 -38719281 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 1079 222 307 13 0 chr15 64775985 64776060 -38718914 + (TG)n Simple_repeat Simple_repeat 2 77 0 3 1079 1536 187 251 6 chr15 64776454 64776808 -38718166 - BGLII_B LTR ERVK 0 441 1 4 1079 232 302 101 30 chr15 64776823 64776922 -38718052 - PB1D10 SINE Alu 0 117 12 4 1079 738 180 11 11 chr15 64776926 64777100 -38717874 + CT-rich Low_complexity Low_complexity 1 174 0 4 1079 1627 223 30 28 chr15 64777262 64777826 -38717148 + Lx4B LINE L1 6405 7058 0 4 1079 3721 187 31 26 chr15 64778778 64779698 -38715276 + Lx4B LINE L1 6061 7042 -8 4 1079 254 316 0 37 chr15 64780368 64780450 -38714524 + PB1D10 SINE Alu 3 81 -36 4 1079 896 258 119 28 chr15 64780584 64780903 -38714071 - Lx8 LINE L1 -94 7379 7032 4 1079 2517 168 36 54 chr15 64780903 64781349 -38713625 + RLTR20C LTR ERVK 1 435 -99 4 1079 450 0 0 0 chr15 64781349 64781399 -38713575 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1079 2517 168 36 54 chr15 64781399 64781473 -38713501 + RLTR20C LTR ERVK 436 512 -22 4 1079 1219 247 56 35 chr15 64781473 64781850 -38713124 - Lx8 LINE L1 -439 7034 6650 4 1079 1088 249 61 33 chr15 64783254 64783499 -38711475 - MTEa LTR MaLR -120 259 8 4 1079 390 262 19 0 chr15 64784653 64784756 -38710218 - MER97c DNA MER1_type? -398 692 588 4 1079 1164 265 12 9 chr15 64784761 64785081 -38709893 - Lx8 LINE L1 -194 7279 6959 4 1079 609 27 0 0 chr15 64785362 64785437 -38709537 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 4 1079 1105 100 0 27 chr15 64785439 64785624 -38709350 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 1079 444 140 0 31 chr15 64785641 64785737 -38709237 + CT-rich Low_complexity Low_complexity 4 96 0 4 1079 505 318 0 45 chr15 64785781 64785936 -38709038 - MER97c DNA MER1_type? -629 461 314 4 1079 498 291 39 22 chr15 64785954 64786133 -38708841 - MER97c DNA MER1_type? -831 259 78 4 1079 1790 291 60 11 chr15 64786214 64786870 -38708104 - Lx8 LINE L1 -4 7469 6782 4 1079 4537 82 2 10 chr15 64786900 64787502 -38707472 - L1_Mus2 LINE L1 0 6566 5970 4 1079 260 209 46 11 chr15 64788008 64788095 -38706879 - Charlie5 DNA MER1_type -15 2609 2520 4 1079 345 290 108 0 chr15 64788203 64788296 -38706678 + PB1 SINE Alu 23 125 -2 4 1079 378 0 0 0 chr15 64788379 64788421 -38706553 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1079 405 0 0 0 chr15 64788421 64788465 -38706509 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 1079 4294 64 24 0 chr15 64789449 64790031 -38704943 - L1Md_F2 LINE L1 0 6582 5987 4 1079 11729 58 0 19 chr15 64790037 64791197 -38703777 - L1_Mm LINE L1 0 5883 4746 4 1079 5754 2 0 0 chr15 64791197 64791829 -38703145 - L1Md_A LINE L1 0 6582 5951 4 1079 11729 58 0 19 chr15 64791829 64792277 -38702697 - L1_Mm LINE L1 -1138 4745 4305 4 1079 5894 84 0 2 chr15 64792274 64793129 -38701845 + L1_Mm LINE L1 3314 4166 -1717 4 1079 331 224 60 20 chr15 64793908 64794008 -38700966 + MER53 DNA hAT 11 114 -79 4 1079 1130 170 10 0 chr15 64794274 64794468 -38700506 - URR1B DNA MER1_type 0 225 30 4 1079 198 0 0 0 chr15 64795821 64795843 -38699131 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 1079 2438 229 31 34 chr15 64795948 64796589 -38698385 - Lx9 LINE L1 -10 7634 6996 4 1079 37 39 0 0 chr15 64796601 64796652 -38698322 + AT_rich Low_complexity Low_complexity 1 51 0 4 1079 202 239 0 0 chr15 64797425 64797471 -38697503 + T-rich Low_complexity Low_complexity 1 46 0 4 1079 322 315 72 26 chr15 64797652 64797805 -38697169 + MLT1A0 LTR MaLR 2 161 -204 4 1079 379 264 42 37 chr15 64798316 64798532 -38696442 - L1MA7 LINE L1 -1 6290 6074 4 1079 406 233 22 29 chr15 64798536 64798673 -38696301 - L1MA7 LINE L1 -45 6246 6111 4 1079 819 269 122 57 chr15 64799229 64799338 -38695636 + RMER19B LTR ERVK 1 111 -626 4 1079 619 58 0 0 chr15 64799338 64799424 -38695550 - L1Md_T LINE L1 0 6582 6497 4 1079 5549 137 15 25 chr15 64799424 64800309 -38694665 + RMER19B LTR ERVK 44 897 -5 4 1079 251 157 0 19 chr15 64800377 64800429 -38694545 + GA-rich Low_complexity Low_complexity 3 53 0 4 1079 221 150 0 0 chr15 64800441 64800481 -38694493 + (CAAG)n Simple_repeat Simple_repeat 2 41 0 4 1079 3198 56 32 14 chr15 64801314 64801750 -38693224 - RLTR13D5 LTR ERVK -49 974 531 4 1079 287 351 9 0 chr15 64802911 64803025 -38691949 + MIR SINE MIR 50 164 -98 4 1079 6980 97 15 2 chr15 64803166 64804239 -38690735 - L1_Mus3 LINE L1 -7 6631 5541 4 1079 414 0 0 0 chr15 64804704 64804750 -38690224 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1079 975 123 7 14 chr15 64805343 64805491 -38689483 + B1_Mm SINE Alu 1 147 0 4 1079 332 383 43 0 chr15 64805741 64805903 -38689071 + MER20 DNA MER1_type 27 195 -24 4 1079 1798 336 36 10 chr15 64805992 64806762 -38688212 + Lx8 LINE L1 6326 7115 -358 4 1079 270 256 127 8 chr15 64807135 64807253 -38687721 + MIR SINE MIR 102 233 -29 4 1079 310 292 98 15 chr15 64807428 64807560 -38687414 + MLT1C LTR MaLR 26 168 -299 4 1079 668 269 43 29 chr15 64808040 64808247 -38686727 - B3 SINE B2 -6 210 1 4 1079 226 306 0 31 chr15 64808287 64808351 -38686623 + (CCA)n Simple_repeat Simple_repeat 2 63 0 4 1079 1052 145 128 15 chr15 64808572 64808775 -38686199 + URR1A DNA MER1_type 1 226 0 4 1079 283 297 124 15 chr15 64809434 64809612 -38685362 - MIRb SINE MIR -53 215 8 4 1079 1305 92 0 4 chr15 64809634 64809861 -38685113 + (CTA)n Simple_repeat Simple_repeat 1 226 0 4 1079 928 57 8 0 chr15 64809923 64810046 -38684928 + B1_Mm SINE Alu 24 147 0 4 1079 257 366 15 15 chr15 64810369 64810505 -38684469 - MIRb SINE MIR -46 222 87 4 1079 690 65 0 0 chr15 64811105 64811197 -38683777 + (TG)n Simple_repeat Simple_repeat 1 92 0 4 1079 291 271 35 21 chr15 64811202 64811345 -38683629 - L1MA10 LINE L1 -14 6320 6176 4 1079 279 0 0 0 chr15 64811444 64811475 -38683499 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1079 216 222 18 18 chr15 64811706 64811761 -38683213 + MER91C DNA Tip100 72 126 -14 4 1079 207 100 0 0 chr15 64811799 64811829 -38683145 + (TCC)n Simple_repeat Simple_repeat 3 32 0 4 1079 1403 57 17 0 chr15 64811848 64812025 -38682949 - B2_Mm2 SINE B2 -14 181 2 4 1079 260 0 0 54 chr15 64812074 64812111 -38682863 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 4 1079 543 307 111 50 chr15 64812223 64812521 -38682453 - ORR1E LTR MaLR -43 316 1 4 1079 273 276 45 22 chr15 64812521 64812610 -38682364 + MIRb SINE MIR 84 174 -94 4 1079 192 184 0 26 chr15 64812736 64812775 -38682199 + MIRm SINE MIR 209 246 -30 4 1079 1159 75 0 0 chr15 64813382 64813529 -38681445 - B1_Mm SINE Alu 0 147 1 4 1079 2213 90 15 61 chr15 64814242 64814585 -38680389 + ORR1A2 LTR MaLR 1 327 0 4 1079 207 0 0 0 chr15 64814701 64814724 -38680250 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1079 416 337 146 53 chr15 64815289 64816142 -38678832 + L2a LINE L2 2357 3298 -128 4 1079 189 74 0 0 chr15 64816176 64816203 -38678771 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 1079 264 30 0 0 chr15 64816855 64816888 -38678086 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 4 1079 812 246 30 30 chr15 64817705 64817902 -38677072 + B3A SINE B2 2 198 0 4 1079 184 359 64 28 chr15 64817969 64818078 -38676896 + MIRm SINE MIR 164 276 0 4 1079 754 279 34 175 chr15 64818436 64818848 -38676126 - MTEa LTR MaLR -24 355 2 4 1079 351 0 0 0 chr15 64819098 64819137 -38675837 + (T)n Simple_repeat Simple_repeat 1 39 0 4 1079 698 192 0 6 chr15 64819347 64819504 -38675470 + GA-rich Low_complexity Low_complexity 3 158 0 4 1079 1247 84 0 6 chr15 64819504 64819683 -38675291 + (GAA)n Simple_repeat Simple_repeat 3 180 0 4 1079 522 0 0 0 chr15 64819800 64819858 -38675116 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 1079 1733 256 39 50 chr15 64821538 64822023 -38672951 + RLTR11A2 LTR ERVK 48 527 0 4 1079 403 285 62 19 chr15 64824655 64824866 -38670108 + MER33 DNA MER1_type 57 276 -48 4 1079 356 336 16 66 chr15 64824858 64824979 -38669995 - ID_B1 SINE B4 -16 208 94 4 1079 25 31 0 0 chr15 64825495 64825527 -38669447 + AT_rich Low_complexity Low_complexity 1 32 0 4 1079 379 285 108 10 chr15 64825830 64826025 -38668949 - L1MB7 LINE L1 -70 6114 5901 4 1079 5020 4 0 0 chr15 64827273 64827827 -38667147 - L1Md_A LINE L1 0 6582 6029 4 1079 279 325 0 81 chr15 64828354 64828478 -38666496 - RLTR8 LTR ERVK 0 365 252 4 1079 495 0 0 0 chr15 64828750 64828805 -38666169 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 1079 773 316 72 83 chr15 64828880 64829214 -38665760 - Zaphod DNA Tip100 -3025 1006 717 4 1079 4103 65 13 13 chr15 64829214 64829762 -38665212 - L1Md_F2 LINE L1 0 6582 6035 4 1079 773 316 72 83 chr15 64829762 64830246 -38664728 - Zaphod DNA Tip100 -3315 716 197 4 1079 317 351 107 46 chr15 64830253 64830450 -38664524 - MIRb SINE MIR -40 228 20 4 1079 31 0 0 0 chr15 64831134 64831165 -38663809 + AT_rich Low_complexity Low_complexity 1 31 0 4 1079 440 284 16 0 chr15 64831854 64831981 -38662993 + Lx6 LINE L1 7180 7308 -152 4 1079 231 305 109 66 chr15 64832048 64832092 -38662882 - MIRb SINE MIR -101 167 131 4 1079 2018 188 32 15 chr15 64832092 64832492 -38662482 - MTB_Mm LTR MaLR 0 407 1 4 1079 231 305 109 66 chr15 64832492 64832584 -38662390 - MIRb SINE MIR -138 130 25 4 1079 653 66 11 0 chr15 64833237 64833328 -38661646 + (TTCC)n Simple_repeat Simple_repeat 2 93 0 4 1079 402 21 0 0 chr15 64833329 64833376 -38661598 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 1079 1836 149 36 0 chr15 64833401 64833702 -38661272 - Lx2 LINE L1 -3 6994 6683 4 1079 222 37 0 0 chr15 64833946 64833973 -38661001 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1079 8478 7 5 0 chr15 64834008 64835295 -38659679 - L1Md_T LINE L1 0 6582 5290 4 1079 252 315 37 9 chr15 64835695 64835804 -38659170 + LTR79 LTR ERVL 351 462 -65 4 1079 359 315 76 17 chr15 64836965 64837201 -38657773 - Lx8 LINE L1 -236 7237 6988 4 1079 726 308 101 27 chr15 64837245 64837792 -38657182 - L1_Mur3 LINE L1 -3043 2837 2251 4 1079 228 321 66 52 chr15 64837786 64838075 -38656899 - L1_Rod LINE L1 -4348 1499 1207 4 1079 462 18 0 0 chr15 64838081 64838136 -38656838 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1079 226 120 40 0 chr15 64838227 64838277 -38656697 - L1M2 LINE L1 -5063 1786 1735 5 1079 378 323 0 58 chr15 64838938 64839112 -38655862 + HAL1-2a_MD LINE L1 2365 2528 -496 5 1079 430 209 170 50 chr15 64839185 64839326 -38655648 + URR1A DNA MER1_type 68 225 -1 5 1079 1064 71 18 0 chr15 64839338 64839508 -38655466 + (CATATA)n Simple_repeat Simple_repeat 2 174 0 5 1079 571 352 32 0 chr15 64839637 64839884 -38655090 - Lx8 LINE L1 -151 7322 7068 5 1079 1629 290 63 46 chr15 64839892 64840636 -38654338 + Lx9 LINE L1 6870 7626 -18 5 1079 30 27 0 0 chr15 64840641 64840678 -38654296 + AT_rich Low_complexity Low_complexity 1 37 0 5 1079 546 57 0 0 chr15 64840710 64840780 -38654194 + (TTTC)n Simple_repeat Simple_repeat 1 70 0 5 1079 2006 216 101 9 chr15 64840791 64841315 -38653659 - Lx2B LINE L1 -8 6992 6421 5 1079 3288 188 6 1 chr15 64841312 64841958 -38653016 + Lx4B LINE L1 5769 6417 -641 5 1079 1385 270 31 8 chr15 64842069 64842420 -38652554 + ORR1E LTR MaLR 1 359 0 5 1079 347 317 25 34 chr15 64844452 64844824 -38650150 + L1MA4 LINE L1 5123 5497 -803 5 1079 585 326 38 38 chr15 64844830 64845149 -38649825 + Lx8 LINE L1 6942 7260 -213 5 1079 657 308 61 19 chr15 64845307 64845420 -38649554 + L1MA4 LINE L1 5470 5592 -708 5 1079 2578 104 43 0 chr15 64845420 64845794 -38649180 + Lx3A LINE L1 6577 6966 -15 5 1079 432 0 0 0 chr15 64845796 64845844 -38649130 + (TAA)n Simple_repeat Simple_repeat 1 48 0 5 1079 657 291 51 27 chr15 64845844 64846178 -38648796 + L1MA4 LINE L1 5593 5943 -213 5 1079 189 0 0 0 chr15 64846178 64846199 -38648775 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 1079 263 297 119 28 chr15 64847473 64847593 -38647381 + PB1D10 SINE Alu 1 140 -9 5 1079 348 289 32 53 chr15 64847679 64847774 -38647200 - PB1D10 SINE Alu -13 104 12 5 1079 236 360 21 35 chr15 64851015 64851156 -38643818 - L2c LINE L2 -50 3337 3199 5 1079 921 248 5 14 chr15 64851612 64851825 -38643149 - B3 SINE B2 -5 211 1 5 1079 200 217 0 0 chr15 64853015 64853061 -38641913 + T-rich Low_complexity Low_complexity 1 46 0 5 1079 609 76 0 0 chr15 64853785 64853877 -38641097 + (CA)n Simple_repeat Simple_repeat 1 92 0 5 1079 1503 209 121 83 chr15 64854093 64854158 -38640816 - RLTR11A LTR ERVK -4 524 459 5 1079 405 0 0 0 chr15 64854158 64854203 -38640771 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1079 1503 209 121 83 chr15 64854203 64854642 -38640332 - RLTR11A LTR ERVK -70 458 3 5 1079 342 0 0 0 chr15 64857376 64857414 -38637560 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1079 226 286 52 0 chr15 64858468 64858545 -38636429 - ORR1E LTR MaLR -2 357 277 5 1079 680 12 24 0 chr15 64858548 64858632 -38636342 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 5 1079 744 333 8 17 chr15 64858634 64858872 -38636102 - ORR1E LTR MaLR -123 236 1 5 1079 1180 315 25 22 chr15 64859864 64860231 -38634743 + MTE2b LTR MaLR 5 372 -7 5 1079 3751 300 74 25 chr15 64860242 64861540 -38633434 + MTE2b-int LTR MaLR 1 1362 -218 5 1079 592 275 17 0 chr15 64861585 64861705 -38633269 - ID_B1 SINE B4 -13 211 90 5 1079 210 143 0 0 chr15 64861792 64861827 -38633147 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1079 484 270 32 13 chr15 64861842 64861996 -38632978 + MTE2b-int LTR MaLR 1422 1578 -2 5 1079 228 291 217 43 chr15 64862015 64862130 -38632844 + MTE2b LTR MaLR 29 163 -216 5 1079 423 0 0 0 chr15 64862549 64862596 -38632378 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1079 192 268 54 0 chr15 64862623 64862679 -38632295 + MIRc SINE MIR 108 166 -102 5 1079 441 0 0 0 chr15 64862804 64862853 -38632121 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1079 22 0 0 0 chr15 64863925 64863947 -38631027 + AT_rich Low_complexity Low_complexity 1 22 0 5 1079 330 313 164 74 chr15 64864096 64864365 -38630609 - ORR1D2 LTR MaLR -35 335 43 5 1079 1258 240 49 84 chr15 64864818 64865209 -38629765 - MTE2b LTR MaLR 0 379 3 5 1079 316 316 96 37 chr15 64865720 64866452 -38628522 - L1MD2 LINE L1 -5003 1637 866 5 1079 204 314 14 28 chr15 64867094 64867166 -38627808 - L2a LINE L2 -62 3364 3294 5 1079 1960 236 56 50 chr15 64867189 64867729 -38627245 - RLTR20B3 LTR ERVK -14 563 21 5 1079 508 211 17 17 chr15 64868152 64868326 -38626648 + (CATATA)n Simple_repeat Simple_repeat 4 177 0 5 1079 28 61 0 0 chr15 64868522 64868571 -38626403 + AT_rich Low_complexity Low_complexity 1 49 0 5 1079 241 257 25 57 chr15 64868576 64868733 -38626241 - Lx9 LINE L1 -18 7626 7475 5 1079 867 144 0 0 chr15 64868736 64868889 -38626085 + (TATG)n Simple_repeat Simple_repeat 2 154 0 5 1079 626 341 54 14 chr15 64868916 64869287 -38625687 - Lx9 LINE L1 -207 7437 7052 5 1079 261 343 120 42 chr15 64869482 64869698 -38625276 + MLT1J2 LTR MaLR 74 306 -142 5 1079 283 299 0 0 chr15 64870407 64870484 -38624490 + ID4_ SINE ID 2 78 -5 5 1079 369 0 0 0 chr15 64870495 64870536 -38624438 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1079 360 0 0 0 chr15 64870536 64870575 -38624399 + (GA)n Simple_repeat Simple_repeat 2 41 0 5 1079 657 152 0 0 chr15 64870576 64870714 -38624260 + (CA)n Simple_repeat Simple_repeat 2 139 0 5 1079 360 0 0 0 chr15 64870714 64870754 -38624220 + (GA)n Simple_repeat Simple_repeat 2 41 0 5 1079 993 9 0 0 chr15 64870766 64870880 -38624094 + (CA)n Simple_repeat Simple_repeat 1 114 0 5 1079 207 0 0 0 chr15 64870880 64870902 -38624072 + (GA)n Simple_repeat Simple_repeat 2 24 0 5 1079 1544 40 3 0 chr15 64870902 64871205 -38623769 + (CA)n Simple_repeat Simple_repeat 1 303 0 5 1079 207 0 0 0 chr15 64871642 64871665 -38623309 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 1079 562 216 48 82 chr15 64871870 64872016 -38622958 + B1_Mus2 SINE Alu 1 141 -6 5 1079 1254 210 60 34 chr15 64872300 64872460 -38622514 - Lx9 LINE L1 -6 7638 7472 5 1079 588 65 0 0 chr15 64872460 64872537 -38622437 + (CA)n Simple_repeat Simple_repeat 2 78 0 5 1079 1254 210 60 34 chr15 64872537 64872761 -38622213 - Lx9 LINE L1 -173 7471 7244 5 1079 277 343 0 38 chr15 64872762 64872868 -38622106 - PB1D10 SINE Alu -11 106 5 5 1079 879 263 31 4 chr15 64873670 64873926 -38621048 + Lx7 LINE L1 7059 7321 -375 5 1079 471 48 0 0 chr15 64873939 64874001 -38620973 + (GA)n Simple_repeat Simple_repeat 1 62 0 5 1079 290 296 37 12 chr15 64874251 64874412 -38620562 + L1M6 LINE L1 911 1075 -5421 5 1079 305 288 42 75 chr15 64874743 64874863 -38620111 - PB1D10 SINE Alu 0 117 2 5 1079 764 271 115 48 chr15 64875062 64875555 -38619419 + L1MA7 LINE L1 5762 6284 -7 5 1079 231 265 0 0 chr15 64875882 64875931 -38619043 - MER2 DNA MER2_type -26 319 271 5 1079 3207 43 10 0 chr15 64875971 64876363 -38618611 - MTA_Mm LTR MaLR 0 396 1 5 1079 350 360 78 12 chr15 64876389 64876555 -38618419 + MTE2a LTR MaLR 19 195 -224 5 1079 1459 236 43 25 chr15 64876558 64877001 -38617973 + RMER1C Other Other 890 1340 -2 5 1079 1533 196 80 71 chr15 64877073 64877575 -38617399 - RMER19B LTR ERVK -253 649 93 5 1079 701 292 6 12 chr15 64877589 64877762 -38617212 + MTE2a LTR MaLR 207 378 -1 5 1079 1871 91 11 7 chr15 64878096 64878372 -38616602 + Lx LINE L1 6378 6654 0 5 1079 3734 166 88 24 chr15 64878410 64878866 -38616108 + L1_Mur2 LINE L1 3029 3484 -2393 5 1079 213 39 0 0 chr15 64878866 64878892 -38616082 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 5 1079 3734 166 88 24 chr15 64878892 64879343 -38615631 + L1_Mur2 LINE L1 3485 3994 -1883 5 1079 1270 223 42 42 chr15 64879342 64879585 -38615389 + Lx5 LINE L1 6666 6907 -143 5 1079 396 0 0 0 chr15 64879585 64879629 -38615345 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1079 1270 223 42 42 chr15 64879629 64879769 -38615205 + Lx5 LINE L1 6908 7049 -1 5 1079 216 0 0 0 chr15 64879995 64880019 -38614955 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 1079 263 103 0 3 chr15 64880296 64880346 -38614628 + L1_Mus4 LINE L1 6255 6297 -339 5 1079 700 59 20 0 chr15 64880431 64880533 -38614441 + (CA)n Simple_repeat Simple_repeat 1 104 0 5 1079 198 71 0 0 chr15 64880537 64880565 -38614409 + (CAGAGA)n Simple_repeat Simple_repeat 1 28 0 5 1080 1066 88 0 0 chr15 64880873 64881010 -38613964 + B1_Mm SINE Alu 2 138 -9 5 1080 212 104 83 0 chr15 64881257 64881305 -38613669 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1080 601 114 22 43 chr15 64881326 64881464 -38613510 + GA-rich Low_complexity Low_complexity 4 138 0 5 1080 915 314 85 28 chr15 64881490 64881928 -38613046 - MLT2B2 LTR ERVL -125 476 1 5 1080 181 358 102 39 chr15 64882395 64882523 -38612451 - MIRb SINE MIR -39 229 94 5 1080 22 35 0 0 chr15 64882633 64882662 -38612312 + AT_rich Low_complexity Low_complexity 1 29 0 5 1080 2282 62 3 0 chr15 64882796 64883087 -38611887 - L1_Mus1 LINE L1 0 6567 6276 5 1080 459 0 0 0 chr15 64883109 64883160 -38611814 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1080 252 229 197 0 chr15 64883160 64883221 -38611753 - B3A SINE B2 -125 73 1 5 1080 2075 133 160 11 chr15 64883823 64884204 -38610770 + RLTR44B LTR ERVK 12 449 0 5 1080 2887 59 20 40 chr15 64884244 64884648 -38610326 + MTA_Mm LTR MaLR 1 396 0 5 1080 199 193 12 12 chr15 64886230 64886314 -38608660 + (TA)n Simple_repeat Simple_repeat 2 85 0 5 1080 320 283 0 9 chr15 64886394 64886508 -38608466 + Lx2B LINE L1 6882 6994 -6 5 1080 363 240 177 7 chr15 64886680 64886827 -38608147 - L1MEf LINE L1 -2445 4555 4384 5 1080 27 0 0 0 chr15 64886948 64886975 -38607999 + AT_rich Low_complexity Low_complexity 1 27 0 5 1080 1796 241 104 16 chr15 64887058 64887623 -38607351 - Lx9 LINE L1 -28 7616 7002 5 1080 231 296 110 0 chr15 64887657 64887818 -38607156 - L1MEf LINE L1 -4588 2514 2275 5 1080 2497 71 3 0 chr15 64887912 64888238 -38606736 - L1_Mus1 LINE L1 0 6567 6241 5 1080 567 325 43 38 chr15 64889070 64889281 -38605693 - B3A SINE B2 -4 212 1 5 1080 189 373 44 26 chr15 64891356 64891469 -38603505 - MIRb SINE MIR -20 248 134 5 1080 282 342 94 12 chr15 64891757 64891917 -38603057 + B4A SINE B4 102 274 -18 5 1080 266 73 0 24 chr15 64891943 64891985 -38602989 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1080 202 275 0 0 chr15 64892949 64892989 -38601985 + polypyrimidine Low_complexity Low_complexity 1 40 0 5 1080 1210 0 0 72 chr15 64892989 64893183 -38601791 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 5 1080 585 76 0 0 chr15 64893184 64893263 -38601711 + (TC)n Simple_repeat Simple_repeat 2 80 0 6 1080 7361 172 20 14 chr15 64893274 64895303 -38599671 - Lx5 LINE L1 -4 7046 5006 6 1080 229 369 0 0 chr15 64896283 64896348 -38598626 - tRNA-Ala-GCY_ tRNA tRNA -7 68 4 6 1080 3018 187 18 4 chr15 64896447 64897004 -38597970 - RMER1A Other Other -174 856 292 6 1080 1605 290 46 18 chr15 64896982 64897714 -38597260 - RMER1B Other Other -560 506 9 6 1080 525 32 0 0 chr15 64898864 64898927 -38596047 + (TAGA)n Simple_repeat Simple_repeat 2 64 0 6 1080 218 325 192 24 chr15 64899291 64899458 -38595516 - MIRb SINE MIR -14 254 60 6 1080 666 319 69 22 chr15 64900401 64900718 -38594256 + Lx8 LINE L1 7140 7471 -2 6 1080 320 279 146 28 chr15 64901113 64901257 -38593717 - MIRc SINE MIR 0 268 108 6 1080 411 21 0 0 chr15 64901822 64901870 -38593104 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1080 554 345 85 33 chr15 64901875 64902145 -38592829 - B4A SINE B4 -7 285 2 6 1080 471 340 80 40 chr15 64902321 64902398 -38592576 - MLT1I LTR MaLR -124 287 199 6 1080 842 84 14 14 chr15 64902398 64902542 -38592432 + (GA)n Simple_repeat Simple_repeat 1 144 0 6 1080 471 340 80 40 chr15 64902542 64902740 -38592234 - MLT1I LTR MaLR -213 198 2 6 1080 183 343 138 37 chr15 64902944 64903053 -38591921 - MIRb SINE MIR -110 158 39 6 1080 193 240 0 26 chr15 64903477 64903554 -38591420 + GA-rich Low_complexity Low_complexity 2 76 0 6 1080 191 61 0 29 chr15 64903585 64903619 -38591355 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 6 1080 257 120 40 0 chr15 64903806 64903856 -38591118 + A-rich Low_complexity Low_complexity 4 55 0 6 1080 306 0 0 0 chr15 64903925 64903959 -38591015 + (TC)n Simple_repeat Simple_repeat 2 35 0 6 1080 387 0 0 0 chr15 64903959 64904001 -38590973 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1080 346 228 12 19 chr15 64904677 64904838 -38590136 + (TA)n Simple_repeat Simple_repeat 2 161 0 6 1080 439 186 72 16 chr15 64904857 64905117 -38589857 + (CATATA)n Simple_repeat Simple_repeat 1 274 0 6 1080 390 21 0 0 chr15 64905209 64905256 -38589718 + (GAAA)n Simple_repeat Simple_repeat 4 50 0 6 1080 509 283 16 8 chr15 64905288 64905409 -38589565 + RSINE1 SINE B4 7 128 -37 6 1080 217 209 84 56 chr15 64906485 64906556 -38588418 + MIRb SINE MIR 156 228 -40 6 1080 24 0 0 0 chr15 64906873 64906897 -38588077 + AT_rich Low_complexity Low_complexity 1 24 0 6 1080 243 314 127 16 chr15 64907246 64907372 -38587602 + MIRb SINE MIR 37 176 -92 6 1080 2544 74 65 3 chr15 64908026 64908364 -38586610 + RLTR10D LTR ERVK 1 359 0 6 1080 696 211 20 0 chr15 64908367 64908519 -38586455 + Lx3C LINE L1 6820 6974 -2 6 1080 189 329 54 14 chr15 64908603 64908677 -38586297 + MIRb SINE MIR 47 123 -145 6 1080 281 289 0 0 chr15 64909037 64909113 -38585861 + (CATA)n Simple_repeat Simple_repeat 4 79 0 6 1080 724 238 14 7 chr15 64909755 64909903 -38585071 + B1_Mur4 SINE Alu 2 150 0 6 1080 225 364 9 35 chr15 64910101 64910215 -38584759 - MER63B DNA AcHobo -9 427 317 6 1080 1177 258 18 52 chr15 64910450 64910502 -38584472 - Lx9 LINE L1 -410 7234 7189 6 1080 2825 88 49 3 chr15 64910502 64910891 -38584083 + MTB_Mm LTR MaLR 1 407 0 6 1080 1177 258 18 52 chr15 64910891 64911276 -38583698 - Lx9 LINE L1 -456 7188 6812 6 1080 580 296 22 9 chr15 64911283 64911505 -38583469 + Lx9 LINE L1 7263 7487 -157 6 1080 24 0 0 0 chr15 64911572 64911596 -38583378 + AT_rich Low_complexity Low_complexity 1 24 0 6 1080 208 173 0 19 chr15 64912141 64912194 -38582780 + A-rich Low_complexity Low_complexity 3 54 0 6 1080 311 315 22 0 chr15 64912287 64912376 -38582598 - PB1D10 SINE Alu -10 107 17 6 1080 674 295 31 55 chr15 64913170 64913425 -38581549 - B4A SINE B4 -42 250 2 6 1080 251 364 56 28 chr15 64913825 64914003 -38580971 + MIR SINE MIR 70 252 -10 6 1080 254 321 28 50 chr15 64914379 64914407 -38580567 - B1_Mm SINE Alu -7 140 116 6 1080 193 57 57 0 chr15 64914407 64914442 -38580532 + (TTG)n Simple_repeat Simple_repeat 3 39 0 6 1080 337 321 28 50 chr15 64914442 64914554 -38580420 - B1F1 SINE Alu -32 115 3 6 1080 1068 101 0 0 chr15 64915571 64915710 -38579264 + B1_Mus1 SINE Alu 1 139 -9 6 1080 207 140 0 74 chr15 64915711 64915765 -38579209 + A-rich Low_complexity Low_complexity 5 54 0 6 1080 191 341 107 38 chr15 64915853 64915984 -38578990 + L3 LINE CR1 4342 4481 -8 6 1080 191 344 166 19 chr15 64916819 64916976 -38577998 + MIRb SINE MIR 74 253 -15 6 1080 927 75 90 0 chr15 64917158 64917292 -38577682 - B1_Mus1 SINE Alu 0 148 3 6 1080 644 339 65 56 chr15 64917460 64917801 -38577173 - ORR1E LTR MaLR -13 346 3 6 1080 438 248 48 91 chr15 64918448 64918627 -38576347 + B4A SINE B4 2 168 -124 6 1080 1020 62 22 28 chr15 64920991 64921172 -38573802 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 6 1080 3094 67 12 5 chr15 64921186 64921604 -38573370 - BGLII LTR ERVK 0 421 1 6 1080 3058 206 102 6 chr15 64921605 64922546 -38572428 - MYSERV16_I-int LTR ERVK 0 2326 1296 6 1080 615 329 19 0 chr15 64922744 64922951 -38572023 - B3 SINE B2 -5 211 1 6 1080 32256 77 4 5 chr15 64923078 64929297 -38565677 - L1Md_F3 LINE L1 -14 6570 358 6 1080 11520 160 48 7 chr15 64929510 64931803 -38563171 - Lx2B LINE L1 -5 6995 4638 6 1080 315 0 0 0 chr15 64931803 64931838 -38563136 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 6 1080 11520 155 39 8 chr15 64931838 64932766 -38562208 - Lx2B LINE L1 -1240 4637 3662 6 1080 243 0 0 0 chr15 64932766 64932793 -38562181 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 1080 11520 155 39 8 chr15 64932793 64932870 -38562104 - Lx2B LINE L1 -2216 3661 3579 6 1080 3900 177 30 18 chr15 64932865 64934154 -38560820 - Lx2B LINE L1 -1909 2005 720 6 1080 432 96 13 64 chr15 64934581 64934659 -38560315 + B2_Mm2 SINE B2 104 177 -18 6 1080 351 0 0 0 chr15 64936046 64936085 -38558889 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1080 1670 32 17 134 chr15 64936700 64936957 -38558017 + L1Md_F3 LINE L1 6360 6584 0 6 1080 296 390 112 40 chr15 64937116 64937367 -38557607 + B4 SINE B4 1 269 -23 6 1080 459 0 0 0 chr15 64937391 64937442 -38557532 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1080 189 0 0 0 chr15 64938226 64938247 -38556727 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 1080 262 280 0 85 chr15 64938325 64938407 -38556567 + Lx8 LINE L1 7253 7327 -146 6 1080 250 130 73 18 chr15 64938978 64939033 -38555941 - L1M3 LINE L1 -930 5210 5153 6 1080 302 370 34 7 chr15 64939222 64939369 -38555605 - MIRb SINE MIR -45 223 73 6 1080 2099 223 135 17 chr15 64939428 64940140 -38554834 + L1_Rod LINE L1 5051 5846 -1 6 1080 315 0 0 0 chr15 64940437 64940472 -38554502 + (TC)n Simple_repeat Simple_repeat 1 35 0 6 1080 1503 215 43 38 chr15 64941332 64941704 -38553270 - ORR1D1 LTR MaLR 0 374 1 6 1080 766 296 64 100 chr15 64941711 64941879 -38553095 + MTEa LTR MaLR 3 177 -202 6 1080 796 89 16 0 chr15 64941879 64942002 -38552972 + (GAGAA)n Simple_repeat Simple_repeat 1 125 0 6 1080 766 296 64 100 chr15 64942002 64942224 -38552750 + MTEa LTR MaLR 178 379 0 6 1080 3203 175 41 17 chr15 64942276 64942925 -38552049 - RMER6A LTR ERVK -49 707 10 6 1080 181 299 72 80 chr15 64943316 64943454 -38551520 - L3 LINE CR1 -3548 941 805 6 1080 25 51 0 0 chr15 64943520 64943559 -38551415 + AT_rich Low_complexity Low_complexity 1 39 0 6 1080 588 278 46 50 chr15 64943599 64943902 -38551072 + L1MA6 LINE L1 5999 6300 0 6 1080 1150 262 143 42 chr15 64943918 64944512 -38550462 + Lx9 LINE L1 6986 7639 -5 6 1080 4350 66 0 2 chr15 64944499 64945075 -38549899 - L1_Mm LINE L1 -68 5815 5241 6 1080 3358 42 0 7 chr15 64945075 64945486 -38549488 + L1Md_F2 LINE L1 6174 6581 -1 6 1080 1864 234 38 0 chr15 64945513 64945910 -38549064 + Lx5 LINE L1 6639 7050 0 6 1080 211 169 17 17 chr15 64945911 64945971 -38549003 + A-rich Low_complexity Low_complexity 6 65 0 6 1080 1162 303 52 14 chr15 64946099 64946447 -38548527 + MTEa LTR MaLR 19 379 0 6 1080 440 254 134 4 chr15 64946681 64946950 -38548024 + L1MC3 LINE L1 7405 7708 -77 6 1080 365 261 21 21 chr15 64947073 64947167 -38547807 + RSINE1 SINE B4 4 97 -68 6 1080 4355 14 2 12 chr15 64947184 64947682 -38547292 - MT2_Mm LTR ERVL 0 493 1 6 1080 302 0 0 0 chr15 64947682 64947720 -38547254 - MERVL-int LTR ERVL 0 5485 5448 6 1080 390 167 46 35 chr15 64947720 64947807 -38547167 - ORR1A3-int LTR MaLR -1323 640 553 6 1080 38753 16 14 0 chr15 64947807 64953094 -38541880 - MERVL-int LTR ERVL -125 5360 1 6 1080 4355 14 2 12 chr15 64953094 64953592 -38541382 - MT2_Mm LTR ERVL 0 493 1 6 1080 765 58 25 0 chr15 64953654 64953774 -38541200 + (TC)n Simple_repeat Simple_repeat 2 124 0 6 1080 23 33 0 0 chr15 64953776 64953806 -38541168 + AT_rich Low_complexity Low_complexity 1 30 0 6 1080 8168 23 5 0 chr15 64953977 64955093 -38539881 - L1Md_A LINE L1 -2 6580 5459 6 1080 3679 74 13 44 chr15 64955082 64955632 -38539342 - L1_Mus2 LINE L1 -32 6534 6002 6 1080 2289 230 66 47 chr15 64955632 64956387 -38538587 - RMER19B LTR ERVK -14 888 1 6 1080 273 261 116 83 chr15 64957309 64957430 -38537544 + MER5A DNA MER1_type 63 187 -2 6 1080 1320 321 69 12 chr15 64958617 64959266 -38535708 + Lx8 LINE L1 6556 7241 -232 6 1080 2902 95 0 11 chr15 64960172 64960607 -38534367 - Lx LINE L1 -623 6031 5602 6 1080 5042 160 12 0 chr15 64960598 64961506 -38533468 + L1_Mm LINE L1 4720 5638 -245 6 1080 439 163 31 0 chr15 64962080 64962178 -38532796 + CT-rich Low_complexity Low_complexity 3 103 0 6 1080 778 327 119 20 chr15 64963448 64963801 -38531173 + MTD LTR MaLR 18 405 -14 6 1080 3849 186 20 0 chr15 64964222 64964916 -38530058 + MERVL_2A-int LTR ERVL 3814 4521 -1240 6 1080 365 179 147 0 chr15 64964985 64965080 -38529894 + Lx9 LINE L1 7334 7442 -202 6 1080 488 286 40 7 chr15 64965085 64965233 -38529741 - MLT1A1 LTR MaLR -253 155 3 6 1080 731 277 139 11 chr15 64965551 64965832 -38529142 - Lx8 LINE L1 -6 7467 7151 6 1080 326 165 13 0 chr15 64966174 64966253 -38528721 + (TA)n Simple_repeat Simple_repeat 2 81 0 6 1080 323 353 33 20 chr15 64966807 64966960 -38528014 - HAL1-3A_ME LINE L1 -420 2438 2284 6 1080 213 82 61 0 chr15 64966960 64967009 -38527965 + (TTCC)n Simple_repeat Simple_repeat 4 55 0 7 1080 687 282 28 17 chr15 64967288 64967465 -38527509 + B4A SINE B4 114 292 0 7 1080 185 312 65 0 chr15 64968163 64968240 -38526734 - MIR SINE MIR -3 259 178 7 1080 180 205 25 25 chr15 64968396 64968436 -38526538 - MIR SINE MIR -190 72 33 7 1080 498 17 0 0 chr15 64969706 64969765 -38525209 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1080 306 0 0 0 chr15 64969765 64969798 -38525176 + (GA)n Simple_repeat Simple_repeat 2 35 0 7 1080 394 336 108 28 chr15 64969856 64970233 -38524741 + L1MC4a LINE L1 6788 7221 -821 7 1080 438 321 101 26 chr15 64970339 64970528 -38524446 - MER21B LTR ERV1 -215 648 446 7 1080 3350 80 4 2 chr15 64971106 64971556 -38523418 + Lx3_Mus LINE L1 6557 7007 -2 7 1080 450 0 0 0 chr15 64972532 64972582 -38522392 + (TTC)n Simple_repeat Simple_repeat 3 52 0 7 1080 968 80 16 33 chr15 64972582 64972764 -38522210 + (TCC)n Simple_repeat Simple_repeat 2 180 0 7 1080 675 311 28 23 chr15 64972961 64973350 -38521624 + L1M4 LINE L1 4237 4627 -1519 7 1080 604 246 27 98 chr15 64973377 64973502 -38521472 + L1M4 LINE L1 5045 5168 -978 7 1080 180 0 0 0 chr15 64973502 64973522 -38521452 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 7 1080 604 274 48 96 chr15 64973522 64974179 -38520795 + L1M4 LINE L1 5169 5781 -399 7 1080 3133 122 20 11 chr15 64974207 64974778 -38520196 + Lx LINE L1 5966 6880 -96 7 1080 678 306 91 76 chr15 64974778 64975107 -38519867 - ORR1E LTR MaLR -25 334 1 7 1080 2284 174 100 34 chr15 64975158 64975658 -38519316 + RMER16 LTR ERVK 1 533 0 7 1080 1457 270 33 69 chr15 64975849 64976330 -38518644 - RMER19C LTR ERVK -10 601 138 7 1080 324 242 75 15 chr15 64976359 64976493 -38518481 + L1MB4 LINE L1 6032 6173 -7 7 1080 1208 61 0 0 chr15 64977615 64977763 -38517211 - B1_Mus1 SINE Alu 0 148 1 7 1080 670 176 8 39 chr15 64977776 64977906 -38517068 - B1_Mur3 SINE Alu -1 148 23 7 1080 436 204 221 0 chr15 64978598 64978711 -38516263 - B1F SINE Alu 0 149 12 7 1080 858 58 0 0 chr15 64978771 64978892 -38516082 + (GA)n Simple_repeat Simple_repeat 2 122 0 7 1080 200 184 0 0 chr15 64979040 64979078 -38515896 + (TTGG)n Simple_repeat Simple_repeat 1 38 0 7 1080 1140 99 0 0 chr15 64979178 64979340 -38515634 - L1_Mus1 LINE L1 0 6567 6406 7 1080 905 155 103 0 chr15 64979782 64979956 -38515018 + ORR1C2 LTR MaLR 3 194 -190 7 1080 461 204 6 0 chr15 64979956 64980118 -38514856 + CT-rich Low_complexity Low_complexity 1 163 0 7 1080 861 203 59 6 chr15 64980124 64980343 -38514631 + ORR1C2 LTR MaLR 87 357 -27 7 1080 30 27 0 0 chr15 64980373 64980410 -38514564 + AT_rich Low_complexity Low_complexity 1 37 0 7 1080 17043 101 8 7 chr15 64980612 64983328 -38511646 + L1_Mm LINE L1 1371 4090 -1793 7 1080 33756 65 2 4 chr15 64983911 64990110 -38504864 - L1Md_F2 LINE L1 -1 6584 304 7 1080 22 88 0 0 chr15 64990342 64990399 -38504575 + AT_rich Low_complexity Low_complexity 1 57 0 7 1080 24 32 0 0 chr15 64990558 64990589 -38504385 + AT_rich Low_complexity Low_complexity 1 31 0 7 1080 7049 80 10 0 chr15 64990945 64991821 -38503153 - L1_Mus1 LINE L1 0 6567 5691 7 1080 3974 42 12 0 chr15 64991821 64992302 -38502672 + L1Md_F2 LINE L1 6095 6581 -1 7 1080 7049 108 15 0 chr15 64992302 64992816 -38502158 - L1_Mus1 LINE L1 -193 5690 5166 7 1080 1552 126 0 0 chr15 64992813 64993052 -38501922 + L1_Mus1 LINE L1 4920 5158 -725 7 1080 393 22 0 0 chr15 64994202 64994248 -38500726 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1080 11529 80 9 12 chr15 64994248 64996606 -38498368 + L1_Mus1 LINE L1 4217 6567 0 7 1080 4320 89 16 7 chr15 64996796 64997404 -38497570 + L1Md_F2 LINE L1 5969 6582 0 7 1080 202 237 36 18 chr15 64997718 64997886 -38497088 + GA-rich Low_complexity Low_complexity 1 170 0 7 1080 321 47 0 0 chr15 64998841 64998884 -38496090 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 1080 588 29 0 0 chr15 64998884 64998953 -38496021 + (GA)n Simple_repeat Simple_repeat 1 70 0 7 1080 284 348 88 26 chr15 64999111 64999303 -38495671 + MLT1A1 LTR MaLR 70 273 -135 7 1080 225 0 0 0 chr15 64999588 64999613 -38495361 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 7 1080 240 351 0 13 chr15 64999843 64999921 -38495053 - MLT1I LTR MaLR -239 172 96 7 1080 185 432 0 8 chr15 65000198 65000317 -38494657 + MIRb SINE MIR 65 182 -86 1 1080 264 211 19 0 chr15 65000483 65000535 -38494439 - 5S rRNA rRNA -31 90 38 2 1080 203 351 51 26 chr15 65001553 65001670 -38493304 + MIR3 SINE MIR 61 180 -28 3 1080 588 300 221 4 chr15 65002354 65002625 -38492349 - MTE2b LTR MaLR -11 368 39 4 1080 261 0 0 0 chr15 65003130 65003159 -38491815 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1080 224 299 55 44 chr15 65003258 65003349 -38491625 - B4A SINE B4 -197 95 4 6 1080 825 278 56 108 chr15 65003709 65004136 -38490838 - MLT1A1 LTR MaLR -3 405 1 7 1080 526 283 67 46 chr15 65004222 65004611 -38490363 + L1MB3 LINE L1 4694 5090 -1050 8 1080 217 364 13 0 chr15 65004870 65004947 -38490027 + B4A SINE B4 1 78 -214 9 1080 588 299 64 41 chr15 65005285 65005630 -38489344 + L1MB3 LINE L1 5388 5740 -443 8 1080 2011 61 18 13 chr15 65005633 65006011 -38488963 - RLTR10A LTR ERVK 0 309 1 1 1080 4588 102 26 10 chr15 65006011 65006753 -38488221 - RLTR10-int LTR ERVK -1 1986 1288 1 1080 3504 60 82 12 chr15 65006753 65007241 -38487733 - RLTR10-int LTR ERVK -1015 5527 5006 1 1080 737 194 6 13 chr15 65007241 65007398 -38487576 - RLTR10-int LTR ERVK -6040 502 347 1 1080 625 108 17 35 chr15 65007400 65007515 -38487459 - RLTR10-int LTR ERVK -6373 169 57 1 1080 321 25 0 0 chr15 65007534 65007574 -38487400 - RLTR10-int LTR ERVK -6387 155 116 1 1080 194 100 30 91 chr15 65007574 65007640 -38487334 + CT-rich Low_complexity Low_complexity 3 64 0 1 1080 372 88 35 0 chr15 65007744 65007801 -38487173 - MMERVK10C-int LTR ERVK -7314 267 209 1 1080 2035 89 23 37 chr15 65007823 65008202 -38486772 - RLTR10A LTR ERVK 0 359 1 1 1080 493 282 14 18 chr15 65008209 65008426 -38486548 + L1MB3 LINE L1 5745 5960 -223 8 1080 21 0 0 0 chr15 65008649 65008670 -38486304 + AT_rich Low_complexity Low_complexity 1 21 0 1 1080 2000 276 59 95 chr15 65008716 65009661 -38485313 - Lx8 LINE L1 -207 7266 6356 1 1080 3177 26 2 78 chr15 65009661 65010083 -38484891 + RLTR10 LTR ERVK 1 390 0 1 1080 7285 45 26 21 chr15 65010085 65011076 -38483898 + RLTR10-int LTR ERVK 3 998 -989 1 1080 280 256 62 39 chr15 65011140 65011270 -38483704 + RLTR10-int LTR ERVK 1462 1594 -5987 1 16 8366 19 0 2 chr15 65011352 65012351 -38482623 + RLTR10-int LTR ERVK 990 1986 -1 1 1081 3177 26 2 78 chr15 65012351 65012773 -38482201 + RLTR10 LTR ERVK 1 390 0 1 1081 478 335 36 6 chr15 65012773 65012941 -38482033 - Lx8 LINE L1 -1112 6361 6189 1 1081 415 107 40 0 chr15 65013143 65013226 -38481748 + B1_Mus2 SINE Alu 60 149 0 1 1081 823 293 33 30 chr15 65013450 65013822 -38481152 - Lx8 LINE L1 -1548 5925 5514 1 1081 579 15 0 0 chr15 65014557 65014625 -38480349 + (TC)n Simple_repeat Simple_repeat 1 68 0 1 1081 950 299 55 0 chr15 65015467 65015778 -38479196 + Lx8 LINE L1 6258 6585 -888 2 1081 437 367 102 45 chr15 65016546 65016860 -38478114 + MLT1K LTR MaLR 103 434 -161 2 1081 27 29 0 0 chr15 65020154 65020188 -38474786 + AT_rich Low_complexity Low_complexity 1 34 0 2 1081 2271 269 29 73 chr15 65020220 65021058 -38473916 - Lx9 LINE L1 -40 7604 6803 2 1081 1250 34 0 0 chr15 65021058 65021204 -38473770 - B1_Mus1 SINE Alu -2 146 1 2 1081 2271 269 29 73 chr15 65021204 65021272 -38473702 - Lx9 LINE L1 -842 6802 6738 2 1081 1574 47 0 10 chr15 65021376 65021570 -38473404 + B2_Mm1a SINE B2 1 192 -1 2 1081 356 319 90 30 chr15 65021834 65022135 -38472839 + Kanga1b DNA Tc2 459 777 -2 2 1081 487 315 12 24 chr15 65022478 65022550 -38472424 + MTE2b LTR MaLR 11 78 -301 2 1081 1052 27 26 40 chr15 65022550 65022702 -38472272 - L1Md_F3 LINE L1 0 6584 6435 2 1081 487 315 12 24 chr15 65022702 65022798 -38472176 + MTE2b LTR MaLR 79 176 -203 2 1081 27 29 0 0 chr15 65022809 65022843 -38472131 + AT_rich Low_complexity Low_complexity 1 34 0 2 1081 472 266 167 111 chr15 65023449 65023726 -38471248 - Arthur1 DNA Tip100 0 3947 3647 3 1081 460 250 99 28 chr15 65023726 65023907 -38471067 + B3A SINE B2 2 195 -3 3 1081 472 266 167 111 chr15 65023907 65024187 -38470787 - Arthur1 DNA Tip100 -301 3646 3359 3 1081 973 232 25 72 chr15 65024340 65024618 -38470356 - MT2A LTR ERVL -265 268 4 3 1081 213 43 20 61 chr15 65025103 65025152 -38469822 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 3 1081 297 75 0 0 chr15 65025268 65025308 -38469666 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 1081 258 302 78 70 chr15 65025468 65025596 -38469378 - LTR40a LTR ERVL -387 132 4 3 1081 360 0 0 0 chr15 65026636 65026676 -38468298 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1081 432 120 0 0 chr15 65028661 65028725 -38466249 + (TTTC)n Simple_repeat Simple_repeat 3 66 0 3 1081 1043 90 28 0 chr15 65028725 65028869 -38466105 - B1_Mus1 SINE Alu 0 148 1 3 1081 432 120 0 0 chr15 65028869 65028879 -38466095 + (TTTC)n Simple_repeat Simple_repeat 1 10 0 3 1081 24 0 0 0 chr15 65030408 65030432 -38464542 + AT_rich Low_complexity Low_complexity 1 24 0 4 1081 682 222 65 202 chr15 65032165 65032566 -38462408 - RLTR14 LTR ERV1 -34 348 3 4 1081 283 356 90 60 chr15 65032819 65033052 -38461922 - MIR SINE MIR -22 240 1 4 1081 212 54 0 51 chr15 65033242 65033281 -38461693 + (CAAAAA)n Simple_repeat Simple_repeat 1 37 0 4 1081 1007 156 22 82 chr15 65033294 65033525 -38461449 + RLTR20B3 LTR ERVK 75 291 -286 4 1081 347 137 0 0 chr15 65033507 65033558 -38461416 + RLTR20B3 LTR ERVK 421 471 -106 4 1081 306 0 0 0 chr15 65033558 65033592 -38461382 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1081 1731 141 51 69 chr15 65033768 65034103 -38460871 + ORR1A4 LTR MaLR 1 329 0 4 1081 492 185 38 19 chr15 65034227 65034387 -38460587 + Lx9 LINE L1 7481 7643 -1 4 1081 342 319 160 40 chr15 65034695 65035073 -38459901 - MTE2b LTR MaLR -18 401 1 4 1081 623 25 0 12 chr15 65036304 65036386 -38458588 + (CA)n Simple_repeat Simple_repeat 2 82 0 4 1081 306 341 171 59 chr15 65036998 65037285 -38457689 - ORR1E LTR MaLR -26 333 15 5 1081 638 307 11 5 chr15 65037358 65037548 -38457426 - MTE-int LTR MaLR -217 1363 1173 5 1081 773 247 27 0 chr15 65038926 65039149 -38455825 + Lx5 LINE L1 6807 7035 -15 5 1081 1940 145 11 66 chr15 65039149 65039497 -38455477 + ORR1A4 LTR MaLR 1 329 0 5 1081 1070 117 0 0 chr15 65039558 65039721 -38455253 - Lx3A LINE L1 -200 5686 5524 5 1081 3980 121 10 32 chr15 65039720 65040413 -38454561 + Lx3A LINE L1 5694 6371 -610 5 1081 2574 117 44 0 chr15 65040413 65040799 -38454175 + Lx3A LINE L1 6573 6975 -6 5 1081 1062 92 12 6 chr15 65040934 65041099 -38453875 - L1_Mus3 LINE L1 0 6638 6473 5 1081 266 0 29 0 chr15 65041570 65041604 -38453370 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1081 537 139 0 0 chr15 65041604 65041726 -38453248 + (GA)n Simple_repeat Simple_repeat 1 122 0 5 1081 235 146 36 0 chr15 65042194 65042249 -38452725 + (CAT)n Simple_repeat Simple_repeat 2 58 0 5 1081 270 125 0 0 chr15 65042249 65042297 -38452677 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1081 270 106 0 0 chr15 65042297 65042344 -38452630 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1081 210 284 55 64 chr15 65042533 65042565 -38452409 - B2_Mm2 SINE B2 -87 108 1 6 1081 263 307 0 26 chr15 65042565 65042642 -38452332 - RSINE1 SINE B4 -89 76 2 6 1081 23 33 0 0 chr15 65042758 65042788 -38452186 + AT_rich Low_complexity Low_complexity 1 30 0 6 1081 225 0 0 0 chr15 65042791 65042816 -38452158 + (TTTCC)n Simple_repeat Simple_repeat 1 25 0 6 1081 1295 67 0 11 chr15 65042818 65042998 -38451976 + (TCTCC)n Simple_repeat Simple_repeat 1 178 0 6 1081 6552 99 13 6 chr15 65042998 65043974 -38451000 - Lx LINE L1 -4 6650 5668 6 1081 307 320 47 16 chr15 65044461 65044588 -38450386 + MER5A1 DNA MER1_type 29 159 -7 6 1081 524 140 0 0 chr15 65044763 65044856 -38450118 - Lx9 LINE L1 -7 7637 7545 6 1081 1320 193 110 83 chr15 65045225 65045598 -38449376 - ORR1C2 LTR MaLR 0 384 2 6 1081 321 272 29 10 chr15 65045917 65046021 -38448953 - MIRc SINE MIR 0 268 163 7 1081 4959 110 11 69 chr15 65047851 65048704 -38446270 + RLTR13B4 LTR ERVK 1 803 0 7 1081 546 304 5 45 chr15 65049389 65049613 -38445361 - B3 SINE B2 0 216 2 7 1081 589 167 86 57 chr15 65049681 65049821 -38445153 + ORR1C2 LTR MaLR 1 144 -234 7 1081 445 193 11 0 chr15 65049792 65049880 -38445094 + ORR1C2-int LTR MaLR 1197 1285 -224 7 1081 714 166 258 27 chr15 65049879 65050054 -38444920 - MTC LTR MaLR -14 407 190 7 1081 1887 235 163 15 chr15 65050054 65050589 -38444385 + RMER20B LTR ERVK 1 614 -13 7 1081 920 189 48 43 chr15 65050574 65050762 -38444212 - MTC LTR MaLR -230 191 3 7 1081 1336 151 0 17 chr15 65050762 65050997 -38443977 + ORR1C2-int LTR MaLR 1279 1509 0 7 1081 1559 167 24 183 chr15 65050998 65051452 -38443522 + ORR1C2 LTR MaLR 3 384 0 7 1081 764 270 17 17 chr15 65051454 65051635 -38443339 + B3 SINE B2 31 211 -5 7 1081 267 54 0 0 chr15 65051636 65051673 -38443301 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 7 1081 342 0 0 0 chr15 65052451 65052489 -38442485 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 7 1081 276 49 0 0 chr15 65052720 65052761 -38442213 - L1_Mus2 LINE L1 -15 6551 6511 7 1081 681 180 14 104 chr15 65052820 65053031 -38441943 + B2_Mm2 SINE B2 3 194 -1 8 1081 368 20 0 20 chr15 65053222 65053272 -38441702 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 8 1081 1180 30 0 0 chr15 65053273 65053408 -38441566 - B1_Mus2 SINE Alu -12 135 1 8 1081 306 366 78 23 chr15 65053582 65053754 -38441220 + MIRb SINE MIR 14 187 -75 8 1081 864 118 0 0 chr15 65054040 65054176 -38440798 + (GA)n Simple_repeat Simple_repeat 1 136 0 8 1081 183 370 53 47 chr15 65054818 65054988 -38439986 + MIR SINE MIR 15 185 -77 8 1081 6234 48 8 0 chr15 65055420 65056185 -38438789 - L1Md_F2 LINE L1 -11 6571 5801 8 1081 234 0 0 0 chr15 65056185 65056211 -38438763 + (T)n Simple_repeat Simple_repeat 1 26 0 8 1081 3723 58 2 0 chr15 65056325 65056809 -38438165 - L1_Mm LINE L1 -79 5804 5320 8 1081 6354 52 1 0 chr15 65057010 65057802 -38437172 + L1Md_F3 LINE L1 5778 6570 -14 8 1081 1131 90 0 0 chr15 65059046 65059191 -38435783 + B1_Mus1 SINE Alu 4 148 0 9 1081 1221 54 0 0 chr15 65059645 65059793 -38435181 - B1_Mus1 SINE Alu 0 148 1 9 1081 221 357 0 0 chr15 65060034 65060104 -38434870 + GA-rich Low_complexity Low_complexity 3 72 0 9 1081 474 354 52 82 chr15 65060731 65061195 -38433779 + MLT1D LTR MaLR 1 450 -55 9 1081 741 23 0 0 chr15 65061206 65061293 -38433681 + (TGG)n Simple_repeat Simple_repeat 3 89 0 9 1081 213 184 41 0 chr15 65061293 65061342 -38433632 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 9 1081 1076 279 18 3 chr15 65061363 65061647 -38433327 - B4A SINE B4 -4 288 1 9 1081 4020 199 53 77 chr15 65061713 65061992 -38432982 - Lx5 LINE L1 0 7050 6822 9 1081 414 0 0 0 chr15 65061992 65062038 -38432936 + (CAGG)n Simple_repeat Simple_repeat 1 46 0 9 1081 4020 199 53 77 chr15 65062038 65062883 -38432091 - Lx5 LINE L1 -229 6821 5954 9 1081 4967 170 11 15 chr15 65062918 65064039 -38430935 + Lx5 LINE L1 4829 5955 -1095 9 1081 442 292 197 0 chr15 65064399 65064577 -38430397 - Lx8 LINE L1 -783 6690 6478 1 1081 333 306 14 43 chr15 65064637 65064949 -38430025 - L1M2 LINE L1 -472 5819 5521 1 1081 1428 225 75 36 chr15 65064980 65065482 -38429492 - RMER4B LTR ERVK -13 572 16 1 1081 323 268 65 8 chr15 65065491 65065615 -38429359 - L1M2 LINE L1 -672 5496 5366 1 1081 301 302 99 38 chr15 65065633 65065764 -38429210 - L1M2 LINE L1 -842 5301 5163 1 1081 213 363 20 71 chr15 65066756 65066854 -38428120 + L2b LINE L2 3278 3370 -5 1 1081 6429 236 60 17 chr15 65067195 65069741 -38425233 - Lx6 LINE L1 -3 7457 4796 1 1081 22 0 0 0 chr15 65069820 65069842 -38425132 + AT_rich Low_complexity Low_complexity 1 22 0 1 1081 529 170 0 2 chr15 65070101 65070218 -38424756 + Lx2A1 LINE L1 6226 6341 -656 1 1081 6632 70 17 3 chr15 65070233 65071158 -38423816 - L1_Mus2 LINE L1 -1 6565 5628 1 1081 4200 97 16 2 chr15 65071152 65071775 -38423199 + L1_Mm LINE L1 4470 5101 -782 1 1081 3632 225 50 65 chr15 65071777 65072191 -38422783 - Lx6 LINE L1 -1073 4807 4384 1 1081 227 31 31 0 chr15 65072191 65072223 -38422751 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 1081 3632 225 50 65 chr15 65072223 65072424 -38422550 - Lx6 LINE L1 -1497 4383 4184 1 1081 1781 161 17 64 chr15 65072424 65072769 -38422205 - ORR1A4 LTR MaLR 0 329 1 1 1081 3632 225 50 65 chr15 65072769 65073140 -38421834 - Lx6 LINE L1 -1697 4183 3846 1 1081 408 55 0 0 chr15 65073140 65073195 -38421779 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1081 3632 225 50 65 chr15 65073195 65073555 -38421419 - Lx6 LINE L1 -2035 3845 3480 1 1081 1554 150 256 31 chr15 65073578 65073929 -38421045 - RLTR23 LTR ERV1 0 430 1 1 1081 3737 225 26 36 chr15 65074545 65076119 -38418855 + Lx6 LINE L1 5133 6691 -769 1 1081 4460 208 54 63 chr15 65076118 65076798 -38418176 - Lx6 LINE L1 -3207 2673 2058 1 1081 507 17 0 0 chr15 65076798 65076858 -38418116 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 1081 4460 231 71 60 chr15 65076858 65078490 -38416484 - Lx6 LINE L1 -3823 2057 347 1 1081 186 181 41 31 chr15 65078815 65078912 -38416062 + (CATA)n Simple_repeat Simple_repeat 4 101 0 1 1081 45 45 0 0 chr15 65080621 65080687 -38414287 + AT_rich Low_complexity Low_complexity 1 66 0 1 1081 2786 140 30 7 chr15 65080744 65081205 -38413769 - Lx LINE L1 -5 6649 6178 1 1081 225 248 70 23 chr15 65081892 65082020 -38412954 + Lx9 LINE L1 7387 7520 -124 1 1081 1276 220 149 25 chr15 65082455 65082897 -38412077 + Lx9 LINE L1 7148 7644 0 1 1081 1443 285 33 6 chr15 65083763 65084123 -38410851 + MTE2b LTR MaLR 6 375 -4 1 1081 664 337 46 3 chr15 65084212 65084536 -38410438 - Lx8 LINE L1 -144 7329 6992 1 1081 301 316 23 11 chr15 65084852 65085028 -38409946 + (TATATG)n Simple_repeat Simple_repeat 1 178 0 1 1081 630 195 55 0 chr15 65085417 65085545 -38409429 + ORR1D2 LTR MaLR 1 135 -235 1 1081 1412 186 0 0 chr15 65085567 65085825 -38409149 - Lx2 LINE L1 0 6997 6740 1 1081 631 49 0 0 chr15 65085828 65085910 -38409064 - Lx2 LINE L1 -498 6499 6418 1 1081 336 336 16 16 chr15 65087074 65087201 -38407773 - MIRb SINE MIR -68 200 74 1 1081 467 313 103 134 chr15 65087308 65087629 -38407345 + MLT1C LTR MaLR 1 311 -79 1 1081 4056 222 55 5 chr15 65088799 65089733 -38405241 + Lx7 LINE L1 17 996 -6732 1 1081 938 246 55 7 chr15 65089731 65090005 -38404969 + Lx7 LINE L1 6063 6349 -1347 1 1081 562 220 15 0 chr15 65090009 65090141 -38404833 + Lx8 LINE L1 6730 6863 -610 1 1081 1454 187 51 30 chr15 65090144 65090480 -38404494 - RMER6C LTR ERVK 0 690 348 1 1081 217 118 39 0 chr15 65090480 65090531 -38404443 + (CAACT)n Simple_repeat Simple_repeat 1 53 0 1 1081 2941 158 40 13 chr15 65090585 65091033 -38403941 + RLTR20B2 LTR ERVK 2 452 -108 1 1081 309 26 0 0 chr15 65091033 65091071 -38403903 + (TC)n Simple_repeat Simple_repeat 2 39 0 1 1081 333 0 0 0 chr15 65091071 65091107 -38403867 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1081 2941 158 40 13 chr15 65091107 65091201 -38403773 + RLTR20B2 LTR ERVK 453 558 -2 1 1081 330 275 86 29 chr15 65091214 65091319 -38403655 - B1F1 SINE Alu -36 113 3 1 1081 509 130 19 148 chr15 65091319 65091394 -38403580 - MT2B LTR ERVL -342 259 199 1 1081 308 271 52 10 chr15 65091642 65091739 -38403235 - ORR1E LTR MaLR -258 101 1 1 1081 1089 68 0 0 chr15 65092334 65092467 -38402507 + B1_Mus1 SINE Alu 4 136 -12 1 1081 993 122 0 0 chr15 65092468 65092624 -38402350 + (GAA)n Simple_repeat Simple_repeat 2 157 0 1 1081 29 0 0 0 chr15 65092761 65092790 -38402184 + AT_rich Low_complexity Low_complexity 1 29 0 1 1081 186 347 0 13 chr15 65093344 65093420 -38401554 - L2a LINE L2 -237 3189 3115 1 1081 359 294 16 40 chr15 65096317 65096441 -38398533 - RLTR14 LTR ERV1 0 382 262 1 1081 474 33 0 0 chr15 65097350 65097410 -38397564 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 1081 364 233 11 11 chr15 65097843 65097934 -38397040 - RLTR42-int LTR ERVK -3735 1787 1697 1 1081 342 98 0 0 chr15 65098103 65098154 -38396820 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1 1081 410 223 106 15 chr15 65098699 65098831 -38396143 - RMER1C Other Other -2 1340 1197 1 1081 180 111 0 0 chr15 65098849 65098876 -38396098 + (ATG)n Simple_repeat Simple_repeat 1 27 0 1 1081 474 168 20 7 chr15 65098882 65099032 -38395942 + GA-rich Low_complexity Low_complexity 1 151 0 1 1081 2085 229 73 47 chr15 65099037 65099437 -38395537 - RMER1C Other Other -152 1190 780 1 1081 545 0 15 0 chr15 65099437 65099502 -38395472 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 1081 2085 229 73 47 chr15 65099502 65099701 -38395273 - RMER1C Other Other -563 779 575 1 1081 4206 71 47 27 chr15 65099886 65100525 -38394449 + L1Md_Gf LINE L1 280 931 -5591 1 1081 4897 185 108 0 chr15 65100526 65101610 -38393364 + Lx3C LINE L1 5774 6974 -2 1 1081 233 310 0 0 chr15 65101736 65101823 -38393151 + L1M5 LINE L1 4468 4554 -1592 1 1081 26 0 0 0 chr15 65102619 65102645 -38392329 + AT_rich Low_complexity Low_complexity 1 26 0 1 1081 6622 125 7 4 chr15 65102786 65103774 -38391200 + Lx2A1 LINE L1 6008 6998 -10 1 1081 183 162 0 0 chr15 65103956 65103993 -38390981 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1081 756 263 29 0 chr15 65103993 65104168 -38390806 - B3A SINE B2 -16 182 3 1 1081 33827 36 1 0 chr15 65104260 65110124 -38384850 + L1Md_T LINE L1 1 5589 -297 1 1081 9038 5 0 0 chr15 65110124 65111159 -38383815 + L1Md_T LINE L1 5590 6585 0 1 1081 533 303 99 49 chr15 65111242 65111654 -38383320 - L1ME1 LINE L1 -51 6128 5686 1 1081 1847 107 128 3 chr15 65111654 65111944 -38383030 - ORR1A2 LTR MaLR 0 327 2 1 1081 652 303 99 49 chr15 65111944 65112017 -38382957 - L1ME1 LINE L1 -494 5685 5619 1 1081 464 0 0 18 chr15 65112062 65112119 -38382855 + (CAAAA)n Simple_repeat Simple_repeat 3 58 0 1 1081 2561 85 53 0 chr15 65112267 65112608 -38382366 - RLTR10D LTR ERVK 0 359 1 1 1081 274 278 20 163 chr15 65112685 65112887 -38382087 - MTEb LTR MaLR -1 378 206 1 1081 280 338 88 34 chr15 65113036 65113183 -38381791 - MLT2B3 LTR ERVL -399 155 1 1 1081 195 349 99 15 chr15 65113618 65113749 -38381225 - L3 LINE CR1 -210 4279 4138 1 1081 506 358 41 15 chr15 65114957 65115153 -38379821 + B3A SINE B2 2 202 -14 1 1081 387 0 0 0 chr15 65115834 65115877 -38379097 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1081 1193 316 32 29 chr15 65115923 65116301 -38378673 - MER70B LTR ERVL -196 382 4 1 1081 181 250 62 0 chr15 65116447 65116511 -38378463 - MIRc SINE MIR -27 241 174 1 1081 2269 294 54 33 chr15 65116552 65117272 -38377702 - Lx6 LINE L1 -10 7450 6716 1 1081 4376 42 0 2 chr15 65118018 65118548 -38376426 + L1Md_T LINE L1 6054 6582 0 1 1081 1302 123 60 19 chr15 65119205 65119420 -38375554 - Lx4B LINE L1 -516 6542 6319 1 1081 1022 237 56 8 chr15 65119410 65119661 -38375313 + Lx4B LINE L1 6792 7054 -4 1 1081 22 0 0 0 chr15 65119664 65119686 -38375288 + AT_rich Low_complexity Low_complexity 1 22 0 1 1081 1008 259 77 8 chr15 65120060 65120321 -38374653 - B4A SINE B4 -10 282 4 1 1081 277 232 134 21 chr15 65120392 65120489 -38374485 - L1MC LINE L1 -2271 5514 5407 1 1081 680 303 86 68 chr15 65120650 65120930 -38374044 + B4A SINE B4 8 292 0 1 1081 429 169 0 0 chr15 65120947 65121030 -38373944 + (CA)n Simple_repeat Simple_repeat 2 84 0 1 1081 29 90 0 0 chr15 65121056 65121134 -38373840 + AT_rich Low_complexity Low_complexity 1 78 0 1 1081 35 24 0 0 chr15 65121325 65121367 -38373607 + AT_rich Low_complexity Low_complexity 1 42 0 1 1081 776 261 113 91 chr15 65121647 65122009 -38372965 - RMER13A LTR ERVK -394 466 97 1 1081 1265 261 91 33 chr15 65122167 65122528 -38372446 - ORR1C2 LTR MaLR -2 382 1 1 1081 1255 280 87 31 chr15 65122595 65123008 -38371966 - Lx9 LINE L1 -851 6793 6358 1 1081 912 214 15 15 chr15 65123124 65123328 -38371646 + L1_Mur2 LINE L1 4891 5094 -783 1 1081 240 310 29 52 chr15 65123327 65123522 -38371452 - L1M4 LINE L1 -3315 2831 2641 1 1081 33 56 0 0 chr15 65123665 65123719 -38371255 + AT_rich Low_complexity Low_complexity 1 54 0 1 1081 1881 142 14 58 chr15 65123778 65124122 -38370852 - ORR1A4 LTR MaLR 0 329 1 1 1081 412 196 248 0 chr15 65124336 65124550 -38370424 - Lx9 LINE L1 0 7644 7378 1 1081 346 330 68 95 chr15 65125156 65125377 -38369597 - LTR16E1 LTR ERVL -101 437 223 1 1081 250 368 51 6 chr15 65126372 65126528 -38368446 - HERV16-int LTR ERVL -2983 2013 1851 1 1081 352 243 0 20 chr15 65126868 65127015 -38367959 + (TA)n Simple_repeat Simple_repeat 1 144 0 1 1081 4585 108 9 12 chr15 65127063 65127748 -38367226 - Lx LINE L1 0 6654 5972 1 1081 1785 148 62 105 chr15 65128039 65128066 -38366908 + ORR1C2 LTR MaLR 1 22 -362 1 1081 1466 208 37 3 chr15 65128066 65128365 -38366609 - RLTR27 LTR ERVK 0 309 1 1 1081 1785 148 62 105 chr15 65128365 65128568 -38366406 + ORR1C2 LTR MaLR 23 193 -191 1 1081 504 72 0 0 chr15 65128568 65128637 -38366337 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 1081 1785 148 62 105 chr15 65128637 65128805 -38366169 + ORR1C2 LTR MaLR 194 383 -1 1 1081 236 381 37 49 chr15 65130111 65130274 -38364700 - LTR16D LTR ERVL -323 328 168 1 1081 996 216 32 9 chr15 65130541 65130761 -38364213 - URR1B DNA MER1_type 0 225 1 1 1081 458 33 17 0 chr15 65131074 65131134 -38363840 + (TC)n Simple_repeat Simple_repeat 2 62 0 1 1081 406 0 37 0 chr15 65131134 65131187 -38363787 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1081 359 225 51 13 chr15 65131190 65131287 -38363687 - B4A SINE B4 -43 249 140 1 1081 511 15 29 0 chr15 65131287 65131355 -38363619 + (TG)n Simple_repeat Simple_repeat 2 71 0 2 1081 400 292 35 0 chr15 65131358 65131471 -38363503 - B4A SINE B4 -175 117 1 1 1081 333 0 0 0 chr15 65132011 65132048 -38362926 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1081 209 365 20 20 chr15 65132221 65132319 -38362655 - MIRb SINE MIR -165 103 6 2 1081 22 0 0 0 chr15 65133333 65133355 -38361619 + AT_rich Low_complexity Low_complexity 1 22 0 2 1081 348 329 20 33 chr15 65133384 65133535 -38361439 - RSINE1 SINE B4 -15 150 2 2 1081 329 327 171 67 chr15 65133994 65134158 -38360816 - B3A SINE B2 -14 184 4 2 1081 234 0 0 0 chr15 65134961 65134987 -38359987 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1081 607 318 108 26 chr15 65135557 65136022 -38358952 + L1MEc LINE L1 192 694 -5706 2 1081 452 298 97 32 chr15 65136065 65136374 -38358600 + L1MEc LINE L1 687 1015 -5385 2 1081 429 271 16 25 chr15 65136495 65136616 -38358358 + B4 SINE B4 11 130 -162 2 1081 240 167 0 0 chr15 65136617 65136665 -38358309 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1081 328 197 72 43 chr15 65138199 65138337 -38356637 - Lx9 LINE L1 -2 7642 7501 2 1081 989 211 85 22 chr15 65138318 65138541 -38356433 + Lx9 LINE L1 7064 7300 -344 2 1081 381 187 0 0 chr15 65138620 65138695 -38356279 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 1081 219 231 39 0 chr15 65138696 65138774 -38356200 + (TA)n Simple_repeat Simple_repeat 2 82 0 2 1081 214 245 19 19 chr15 65140410 65140464 -38354510 + MIR SINE MIR 91 144 -64 2 1081 551 261 12 46 chr15 65140494 65140667 -38354307 - MIR SINE MIR -33 229 63 2 1081 183 250 12 100 chr15 65140769 65140849 -38354125 - MIR SINE MIR -5 257 185 2 1081 1158 69 50 0 chr15 65142095 65142254 -38352720 + L1_Mus1 LINE L1 6398 6564 -3 2 1081 484 291 97 117 chr15 65142405 65142662 -38352312 - RMER15 LTR ERVL -18 557 306 2 1082 336 186 17 0 chr15 65142995 65143054 -38351920 + Charlie17a DNA MER1_type 5 64 -155 2 1082 602 238 144 26 chr15 65143622 65143816 -38351158 - Lx8 LINE L1 -7 7466 7250 2 1082 27 0 0 0 chr15 65143952 65143979 -38350995 + AT_rich Low_complexity Low_complexity 1 27 0 2 1082 398 218 34 22 chr15 65143980 65144069 -38350905 - Lx8 LINE L1 -234 7239 7150 2 1082 610 310 28 57 chr15 65144688 65145040 -38349934 - L1M2 LINE L1 -549 5751 5410 2 1082 208 119 70 23 chr15 65145198 65145241 -38349733 + A-rich Low_complexity Low_complexity 2 46 0 2 1082 947 134 0 22 chr15 65145245 65145428 -38349546 + GA-rich Low_complexity Low_complexity 2 180 0 2 1082 2977 62 5 33 chr15 65146119 65146518 -38348456 + RLTR10 LTR ERVK 1 388 -2 2 1082 3846 201 21 8 chr15 65146810 65147986 -38346988 + L1_Mur2 LINE L1 868 2059 -3818 2 1082 9849 158 80 5 chr15 65147989 65148612 -38346362 + L1_Mur2 LINE L1 1419 2047 -3830 2 1082 252 0 0 0 chr15 65148612 65148640 -38346334 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 1082 9849 158 80 5 chr15 65148640 65149604 -38345370 + L1_Mur2 LINE L1 2048 3047 -2830 2 1082 207 0 0 0 chr15 65149604 65149627 -38345347 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1082 9849 158 80 5 chr15 65149627 65150004 -38344970 + L1_Mur2 LINE L1 3048 3530 -2347 2 1082 3106 35 0 0 chr15 65150006 65150375 -38344599 - L1Md_F2 LINE L1 -14 6568 6200 2 1082 1406 146 4 24 chr15 65150377 65150623 -38344351 + L1_Mur2 LINE L1 4136 4376 -1501 2 1082 566 117 19 0 chr15 65152353 65152456 -38342518 - Lx3_Mus LINE L1 -3 7006 6902 2 1082 203 164 0 16 chr15 65153380 65153442 -38341532 + T-rich Low_complexity Low_complexity 2 62 0 2 1082 199 355 27 0 chr15 65153709 65153819 -38341155 - MIR SINE MIR -41 221 109 2 1082 728 187 65 0 chr15 65154162 65154301 -38340673 + B1_Mus1 SINE Alu 1 148 0 2 1082 198 0 0 0 chr15 65154315 65154337 -38340637 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 2 1082 21 0 0 0 chr15 65155895 65155916 -38339058 + AT_rich Low_complexity Low_complexity 1 21 0 2 1082 231 367 61 61 chr15 65156363 65156543 -38338431 + ORR1E LTR MaLR 73 252 -107 2 1082 342 0 0 0 chr15 65156603 65156641 -38338333 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 1082 675 321 24 4 chr15 65156683 65156930 -38338044 - MER2 DNA MER2_type -8 337 86 2 1082 354 292 8 77 chr15 65156966 65157096 -38337878 - RSINE1 SINE B4 0 165 45 2 1082 233 281 23 15 chr15 65157342 65157425 -38337549 + L2a LINE L2 3285 3415 -11 2 1082 211 417 0 0 chr15 65157623 65157731 -38337243 - L2c LINE L2 -38 3349 3242 2 1082 557 261 0 6 chr15 65158432 65158613 -38336361 + (TA)n Simple_repeat Simple_repeat 1 180 0 2 1082 215 274 0 16 chr15 65158605 65158731 -38336243 + (CATATA)n Simple_repeat Simple_repeat 5 128 0 2 1082 520 17 0 0 chr15 65158733 65158791 -38336183 + L1Md_F2 LINE L1 5529 5586 -297 2 1082 7788 62 4 2 chr15 65158792 65159776 -38335198 + L1Md_F2 LINE L1 5588 6573 -9 2 1082 3857 168 39 14 chr15 65160092 65160829 -38334145 + RMER6A LTR ERVK 1 756 0 2 1082 22 0 0 0 chr15 65161399 65161421 -38333553 + AT_rich Low_complexity Low_complexity 1 22 0 2 1082 270 0 0 0 chr15 65161424 65161454 -38333520 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1082 407 307 40 0 chr15 65161458 65161559 -38333415 - RSINE1 SINE B4 -50 115 11 2 1082 24 32 0 0 chr15 65161647 65161678 -38333296 + AT_rich Low_complexity Low_complexity 1 31 0 2 1082 226 311 113 0 chr15 65162270 65162376 -38332598 + MLT1-int LTR MaLR 86 203 -1168 2 1082 307 205 39 0 chr15 65162728 65162806 -38332168 + Lx9 LINE L1 7557 7637 -7 2 1082 24 32 0 0 chr15 65163146 65163177 -38331797 + AT_rich Low_complexity Low_complexity 1 31 0 2 1082 4780 4 0 0 chr15 65163434 65163964 -38331010 - L1Md_A LINE L1 0 6582 6053 2 1082 316 299 141 7 chr15 65164513 65164648 -38330326 + RSINE1 SINE B4 3 155 -10 2 1082 249 247 54 0 chr15 65164814 65164907 -38330067 + L1MC LINE L1 4769 4866 -1280 2 1082 325 325 66 69 chr15 65165015 65165365 -38329609 + L1M4 LINE L1 4943 5291 -855 2 1082 354 45 0 0 chr15 65166671 65166715 -38328259 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1082 1034 282 105 38 chr15 65166802 65167278 -38327696 - Lx8 LINE L1 -7 7466 6959 2 1082 314 272 104 9 chr15 65167346 65167461 -38327513 - Lx7 LINE L1 -588 7108 6983 2 1082 758 323 35 32 chr15 65167465 65168060 -38326914 - L1_Mur3 LINE L1 -2890 2990 2394 2 1082 781 323 28 24 chr15 65168064 65168318 -38326656 - B4 SINE B4 -37 255 1 2 1082 582 306 124 50 chr15 65168723 65169167 -38325807 - L1MD LINE L1 -2736 3410 2934 2 1082 668 35 11 0 chr15 65169978 65170065 -38324909 + (TTTC)n Simple_repeat Simple_repeat 2 89 0 2 1082 1107 81 9 5 chr15 65170072 65170297 -38324677 + (TTCC)n Simple_repeat Simple_repeat 1 226 0 2 1082 1267 265 75 21 chr15 65170322 65171214 -38323760 - Lx6 LINE L1 -43 7417 6187 2 1082 347 153 11 23 chr15 65171346 65171433 -38323541 - Lx9 LINE L1 -40 7604 7519 2 1082 261 0 0 0 chr15 65171435 65171464 -38323510 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1082 193 383 28 18 chr15 65173403 65173512 -38321462 + L4 LINE RTE 1558 1667 -362 2 1082 898 278 29 3 chr15 65174807 65175157 -38319817 + L1MA4A LINE L1 5569 5927 -376 2 1082 507 73 0 0 chr15 65175266 65175334 -38319640 + (TTTA)n Simple_repeat Simple_repeat 2 69 0 2 1082 1517 153 58 7 chr15 65175334 65175629 -38319345 - Lx2B LINE L1 -34 6966 6657 2 1082 2803 161 7 51 chr15 65175623 65175685 -38319289 - L1_Mur2 LINE L1 -52 5825 5783 2 1082 1199 61 0 0 chr15 65175685 65175833 -38319141 - B1_Mus1 SINE Alu 0 148 1 2 1082 2803 161 7 51 chr15 65175833 65176338 -38318636 - L1_Mur2 LINE L1 -95 5782 5283 2 1082 3196 53 0 10 chr15 65176343 65176739 -38318235 - L1_Mus1 LINE L1 -2 6565 6174 2 1082 4057 47 0 0 chr15 65176739 65177252 -38317722 + L1_Mus1 LINE L1 5654 6166 -401 2 1082 2664 148 6 10 chr15 65177247 65177733 -38317241 - L1_Mur2 LINE L1 -578 5299 4816 2 1082 729 139 8 69 chr15 65177733 65177864 -38317110 + B1_Mur4 SINE Alu 28 150 0 2 1082 414 175 109 16 chr15 65178184 65178312 -38316662 - Lx3_Mus LINE L1 -1 7008 6869 2 1082 237 309 111 53 chr15 65179467 65179638 -38315336 + MLT1H LTR MaLR 43 223 -326 2 1082 289 325 122 0 chr15 65179812 65179935 -38315039 - MLT1H2 LTR MaLR -68 421 284 2 1082 264 300 11 11 chr15 65180401 65180492 -38314482 + MLT1H LTR MaLR 413 503 -46 2 1082 594 156 15 7 chr15 65180664 65180800 -38314174 + CT-rich Low_complexity Low_complexity 1 137 0 2 1082 795 216 17 23 chr15 65180813 65180988 -38313986 + MTEa LTR MaLR 206 379 0 2 1082 430 300 110 18 chr15 65181100 65181263 -38313711 + B3 SINE B2 5 182 -34 2 1082 316 272 157 9 chr15 65181446 65181676 -38313298 - L1MA8 LINE L1 -1362 4778 4515 2 1082 294 294 63 0 chr15 65181687 65181813 -38313161 + L1MA8 LINE L1 4829 4962 -1178 2 1082 8246 135 40 9 chr15 65181811 65183385 -38311589 - Lx2 LINE L1 -1 6996 5357 2 1082 360 0 0 0 chr15 65183385 65183425 -38311549 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1082 6307 188 11 41 chr15 65183425 65184369 -38310605 - Lx2 LINE L1 -527 5356 4466 2 1082 27 49 0 0 chr15 65184406 65184447 -38310527 + AT_rich Low_complexity Low_complexity 1 41 0 2 1082 1301 295 74 37 chr15 65184554 65185162 -38309812 + L1MA8 LINE L1 5140 5774 -517 2 1082 414 0 0 0 chr15 65185162 65185208 -38309766 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1082 1301 303 73 50 chr15 65185208 65185707 -38309267 + L1MA8 LINE L1 5775 6284 -7 2 1082 25 0 0 0 chr15 65185751 65185776 -38309198 + AT_rich Low_complexity Low_complexity 1 25 0 2 1082 245 286 48 117 chr15 65186398 65186501 -38308473 + RSINE1 SINE B4 1 96 -69 2 1082 585 134 0 0 chr15 65186501 65186613 -38308361 + (GA)n Simple_repeat Simple_repeat 2 113 0 2 1082 321 68 0 0 chr15 65186686 65186730 -38308244 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1082 245 330 64 0 chr15 65186977 65187071 -38307903 + MIRb SINE MIR 52 151 -117 2 1082 572 279 14 0 chr15 65187593 65187740 -38307234 + Lx8 LINE L1 6207 6355 -1118 2 1082 351 0 0 0 chr15 65188569 65188608 -38306366 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1082 384 22 0 0 chr15 65188928 65188973 -38306001 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1082 315 0 0 0 chr15 65188986 65189021 -38305953 + (GA)n Simple_repeat Simple_repeat 2 36 0 2 1082 501 345 14 14 chr15 65189080 65189221 -38305753 + RSINE1 SINE B4 3 143 -22 2 1082 288 77 0 0 chr15 65189237 65189276 -38305698 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1082 4125 78 4 13 chr15 65191060 65191609 -38303365 - L1_Mus1 LINE L1 -1 6566 6023 2 1082 1721 97 8 0 chr15 65191609 65191868 -38303106 + L1_Mus1 LINE L1 5733 5993 -574 2 1082 6999 81 4 0 chr15 65191860 65192891 -38302083 - L1_Mus1 LINE L1 -12 6555 5521 3 1082 1786 124 3 7 chr15 65192896 65193196 -38301778 + L1_Mus1 LINE L1 5243 5541 -342 3 1082 12347 74 3 5 chr15 65193251 65195714 -38299260 - L1Md_F2 LINE L1 -4 6578 4122 3 1082 37293 59 1 23 chr15 65195710 65202550 -38292424 - L1Md_T LINE L1 0 6582 99 3 1082 18687 87 4 36 chr15 65202562 65204061 -38290913 - L1Md_A LINE L1 -1754 4129 2686 3 1082 3489 55 14 0 chr15 65204061 65204499 -38290475 + L1Md_F2 LINE L1 6139 6582 0 3 1082 18687 99 18 52 chr15 65204499 65206455 -38288519 - L1Md_A LINE L1 -3198 2685 753 3 1082 310 53 35 18 chr15 65206455 65206512 -38288462 + (TAAA)n Simple_repeat Simple_repeat 4 61 0 3 1082 2735 112 69 0 chr15 65206512 65206949 -38288025 - L1Md_F LINE L1 -5670 849 383 3 1082 886 184 0 6 chr15 65206949 65207113 -38287861 - L1VL1 LINE L1 -6156 266 104 3 1082 264 303 97 5 chr15 65207154 65207340 -38287634 - L1MC3 LINE L1 -103 7682 7480 3 1082 3924 220 10 14 chr15 65207472 65208283 -38286691 - Lx5 LINE L1 -8 7042 6235 3 1082 300 328 0 54 chr15 65208342 65208471 -38286503 - L1M4 LINE L1 -1085 5061 4940 3 1082 433 296 16 75 chr15 65208483 65208669 -38286305 - Lx8 LINE L1 -362 7111 6937 3 1082 809 306 85 20 chr15 65208667 65209268 -38285706 - L1M4 LINE L1 -1644 4502 3863 3 1082 189 121 0 0 chr15 65209859 65209892 -38285082 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1082 364 373 102 43 chr15 65210827 65211219 -38283755 + MLT1H LTR MaLR 9 423 -126 3 1082 519 17 0 0 chr15 65211408 65211468 -38283506 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 3 1082 195 42 0 0 chr15 65211469 65211493 -38283481 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1082 243 0 0 0 chr15 65211493 65211519 -38283455 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 1082 213 39 0 0 chr15 65211713 65211739 -38283235 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1082 1588 124 41 142 chr15 65212283 65212649 -38282325 - ORR1A4 LTR MaLR 0 329 1 3 1082 226 274 32 16 chr15 65212917 65212980 -38281994 + ID4 SINE ID 2 65 -18 3 1082 405 0 0 0 chr15 65213966 65214011 -38280963 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1082 1703 89 4 0 chr15 65214173 65214419 -38280555 - Lx3_Mus LINE L1 -371 6638 6392 3 1082 5154 123 78 2 chr15 65214413 65215828 -38279146 - L1_Mur1 LINE L1 -3898 1988 212 3 1082 180 0 0 0 chr15 65216154 65216174 -38278800 + (CACAA)n Simple_repeat Simple_repeat 5 24 0 3 1082 1244 290 121 13 chr15 65216397 65217003 -38277971 + Lx8 LINE L1 6803 7473 0 3 1082 1854 185 90 16 chr15 65218348 65218727 -38276247 - MTC LTR MaLR -2 419 13 3 1082 186 128 0 0 chr15 65218729 65218768 -38276206 + (A)n Simple_repeat Simple_repeat 1 39 0 3 1082 498 33 0 0 chr15 65219012 65219072 -38275902 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1082 2110 218 116 34 chr15 65219198 65219697 -38275277 + RMER20B LTR ERVK 1 540 -87 3 1082 8557 150 25 21 chr15 65219735 65219846 -38275128 + Lx LINE L1 4267 4367 -1516 3 1082 218 56 0 27 chr15 65219846 65219883 -38275091 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 3 1082 8557 141 23 11 chr15 65219883 65222119 -38272855 + Lx LINE L1 4368 6642 -12 3 1082 1525 127 0 0 chr15 65222137 65222381 -38272593 - L1_Mm LINE L1 -933 4950 4707 3 1082 13043 48 1 71 chr15 65222379 65223884 -38271090 + L1_Mus2 LINE L1 4082 5585 -298 3 1082 8028 36 25 2 chr15 65223884 65224858 -38270116 + L1Md_T LINE L1 5587 6582 0 3 1082 13043 59 5 28 chr15 65224858 65225968 -38269006 + L1_Mus2 LINE L1 5586 6566 0 3 1082 1322 152 0 0 chr15 65226026 65226257 -38268717 - L1_Mur2 LINE L1 -1682 4195 3965 3 1082 1825 193 29 105 chr15 65226260 65226775 -38268199 + Lx LINE L1 6173 6648 -6 3 1082 332 192 0 25 chr15 65227554 65227634 -38267340 + (TATATG)n Simple_repeat Simple_repeat 4 81 0 3 1082 386 394 25 37 chr15 65228178 65228339 -38266635 + RSINE1 SINE B4 3 161 -4 3 1082 3455 127 2 5 chr15 65228819 65229375 -38265599 + Lx2 LINE L1 5993 6546 -451 3 1082 10338 49 0 1 chr15 65229369 65230729 -38264245 - L1_Mm LINE L1 -928 4955 3598 3 1082 5176 44 1 8 chr15 65230729 65231390 -38263584 + L1Md_F2 LINE L1 5868 6524 -58 3 1082 38803 12 1 6 chr15 65231387 65237777 -38257197 - L1Md_A LINE L1 0 6582 232 3 1082 436 96 47 24 chr15 65237779 65237864 -38257110 + L1Md_F2 LINE L1 6495 6581 -3 3 1082 622 186 0 0 chr15 65237881 65237994 -38256980 + Lx2 LINE L1 6531 6643 -354 3 1082 1467 126 0 0 chr15 65237994 65238217 -38256757 + Lx2 LINE L1 6775 6997 0 3 1082 598 213 64 0 chr15 65238414 65238555 -38256419 - Lx9 LINE L1 -690 6954 6805 3 1082 3205 159 12 17 chr15 65238958 65239545 -38255429 + Lx LINE L1 6071 6654 0 3 1082 181 136 128 64 chr15 65240715 65240762 -38254212 + L3 LINE CR1 4139 4188 -301 3 1082 427 380 34 82 chr15 65240909 65241264 -38253710 - ORR1E LTR MaLR 0 359 22 3 1082 408 67 0 0 chr15 65241530 65241590 -38253384 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 1082 184 324 37 64 chr15 65242307 65242416 -38252558 + L2b LINE L2 3270 3375 0 3 1082 249 33 0 0 chr15 65244048 65244078 -38250896 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 1082 235 256 112 34 chr15 65244085 65244174 -38250800 + MT2_Mm LTR ERVL 286 381 -112 3 1082 1096 29 14 0 chr15 65244255 65244395 -38250579 + (TAGA)n Simple_repeat Simple_repeat 3 144 0 3 1082 566 274 244 91 chr15 65244396 65244793 -38250181 - MT2A LTR ERVL -75 458 1 3 1082 270 275 22 0 chr15 65245579 65245670 -38249304 + L1MA6 LINE L1 6186 6278 -22 3 1082 987 71 0 14 chr15 65245770 65245912 -38249062 - L1_Mus2 LINE L1 0 6566 6427 3 1082 480 325 49 83 chr15 65246043 65246392 -38248582 + Charlie13b DNA Charlie 137 473 -39 3 1082 888 166 78 6 chr15 65246952 65247140 -38247834 + ORR1D1 LTR MaLR 1 201 -177 3 1082 531 138 0 0 chr15 65247145 65247232 -38247742 + (TATG)n Simple_repeat Simple_repeat 4 90 0 3 1082 828 249 35 20 chr15 65247269 65247470 -38247504 + ORR1D1 LTR MaLR 166 369 -5 3 1082 302 309 97 8 chr15 65249306 65249430 -38245544 + MIRc SINE MIR 102 236 -32 3 1082 211 371 113 0 chr15 65251145 65251269 -38243705 - MIRc SINE MIR -120 148 11 3 1082 560 265 152 18 chr15 65251889 65252054 -38242920 + B3A SINE B2 8 194 -4 3 1082 2327 155 2 5 chr15 65252094 65252496 -38242478 + L1_Mur2 LINE L1 5395 5795 -82 3 1082 4249 137 101 35 chr15 65252484 65252561 -38242413 - L1_Mur2 LINE L1 -1168 4709 4625 3 1082 315 0 0 0 chr15 65252561 65252596 -38242378 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1082 4249 137 101 35 chr15 65252596 65253459 -38241515 - L1_Mur2 LINE L1 -1253 4624 3708 3 1082 5023 171 57 7 chr15 65253466 65254458 -38240516 + Lx4B LINE L1 5587 6627 -431 3 1082 404 250 0 21 chr15 65254615 65254709 -38240265 - Lx5 LINE L1 -160 6890 6799 3 1082 1533 121 0 0 chr15 65254715 65254954 -38240020 + Lx5 LINE L1 5708 5946 -1104 3 1082 207 88 0 0 chr15 65255033 65255067 -38239907 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 3 1082 1040 103 0 14 chr15 65255069 65255217 -38239757 - B1_Mus1 SINE Alu 0 148 3 3 1082 181 379 97 0 chr15 65255268 65255371 -38239603 + MIR SINE MIR 23 135 -73 3 1082 2100 385 98 27 chr15 65255549 65256853 -38238121 + FordPrefect DNA Tip100 228 1624 -59 3 1082 644 93 0 10 chr15 65256976 65257074 -38237900 + (TCTCCC)n Simple_repeat Simple_repeat 3 99 0 3 1082 225 159 0 0 chr15 65257073 65257117 -38237857 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1082 3462 100 2 21 chr15 65257157 65257687 -38237287 + L1_Mus2 LINE L1 5814 6333 -233 3 1082 26662 116 7 14 chr15 65257678 65258630 -38236344 - L1Md_F LINE L1 -298 5585 4629 3 1082 213 39 0 0 chr15 65258630 65258656 -38236318 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 1082 26662 144 24 36 chr15 65258656 65263133 -38231841 - L1Md_F LINE L1 -1255 4628 220 3 1082 460 256 77 6 chr15 65263148 65263317 -38231657 - L1_Rod LINE L1 -134 5713 5533 3 1082 24 0 0 0 chr15 65263469 65263493 -38231481 + AT_rich Low_complexity Low_complexity 1 24 0 3 1082 222 294 30 60 chr15 65263647 65263781 -38231193 + L2c LINE L2 3258 3387 0 3 1082 335 314 33 0 chr15 65264132 65264342 -38230632 + L1MA6 LINE L1 6084 6300 0 3 1082 348 127 0 0 chr15 65265104 65265159 -38229815 + (TCC)n Simple_repeat Simple_repeat 3 57 0 3 1082 2315 61 3 0 chr15 65265588 65265883 -38229091 + MTA_Mm LTR MaLR 47 342 -54 3 1082 190 231 94 19 chr15 65266292 65266345 -38228629 - MIRb SINE MIR -45 223 167 3 1082 3284 49 36 0 chr15 65266500 65266911 -38228063 - L1Md_F3 LINE L1 -14 6570 6145 3 1082 264 371 88 12 chr15 65267542 65267751 -38227223 + MIRb SINE MIR 3 220 -42 3 1082 538 333 35 24 chr15 65268336 65268580 -38226394 + LTR16D LTR ERVL 428 674 -1 3 1082 5032 131 14 1 chr15 65270302 65271072 -38223902 - Lx2B LINE L1 -4 6996 6217 3 1082 1560 171 17 0 chr15 65271075 65271362 -38223612 + L1_Mur1 LINE L1 5479 5770 -116 3 1082 297 0 0 0 chr15 65271588 65271621 -38223353 + (TC)n Simple_repeat Simple_repeat 2 34 0 3 1082 459 0 0 0 chr15 65271622 65271673 -38223301 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1082 24 67 0 0 chr15 65272138 65272183 -38222791 + AT_rich Low_complexity Low_complexity 1 45 0 3 1082 252 77 0 0 chr15 65272677 65272716 -38222258 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 3 135 6335 45 1 0 chr15 65273567 65274337 -38220637 - L1Md_T LINE L1 -3 6579 5809 3 1083 297 0 0 0 chr15 65274576 65274609 -38220365 + (TTAG)n Simple_repeat Simple_repeat 2 34 0 3 1083 613 257 14 75 chr15 65274702 65274849 -38220125 - RSINE1 SINE B4 -26 139 2 3 1083 423 38 0 0 chr15 65274967 65275020 -38219954 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 1083 512 308 48 0 chr15 65275024 65275181 -38219793 - MLT2B4 LTR ERVL -68 488 286 3 1083 1072 290 66 9 chr15 65275225 65275559 -38219415 + MTEa LTR MaLR 22 374 -5 3 1083 3745 310 90 49 chr15 65275572 65275981 -38218993 + MTEa-int LTR MaLR 9 419 -1161 3 1083 2796 81 34 7 chr15 65275981 65276390 -38218584 + BGLII LTR ERVK 2 421 0 3 1083 3745 310 90 49 chr15 65276390 65277485 -38217489 + MTEa-int LTR MaLR 420 1575 -5 3 1083 180 111 0 0 chr15 65277723 65277750 -38217224 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1083 189 74 0 0 chr15 65277811 65277838 -38217136 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 1083 431 289 51 17 chr15 65277857 65278033 -38216941 - Lx8 LINE L1 -125 7348 7167 4 1083 211 261 43 50 chr15 65278550 65278661 -38216313 - MIRc SINE MIR -35 233 119 4 1083 308 302 12 0 chr15 65278970 65279056 -38215918 + (TG)n Simple_repeat Simple_repeat 2 88 0 4 1083 461 251 22 82 chr15 65279282 65279309 -38215665 - RMER17C LTR ERVK -239 171 150 4 1083 552 30 0 0 chr15 65279309 65279375 -38215599 + (GA)n Simple_repeat Simple_repeat 2 67 0 4 1083 461 251 22 82 chr15 65279375 65279529 -38215445 - RMER17C LTR ERVK -261 149 1 4 1083 31 0 0 0 chr15 65280559 65280590 -38214384 + AT_rich Low_complexity Low_complexity 1 31 0 4 1083 21 0 0 0 chr15 65281199 65281220 -38213754 + AT_rich Low_complexity Low_complexity 1 21 0 4 1083 1936 149 87 22 chr15 65281247 65281617 -38213357 - ORR1B1 LTR MaLR 0 394 1 4 1083 1108 268 172 52 chr15 65281751 65282227 -38212747 - MT2A LTR ERVL 0 533 1 4 1083 27 0 0 0 chr15 65282350 65282377 -38212597 + AT_rich Low_complexity Low_complexity 1 27 0 4 1083 361 290 171 21 chr15 65282652 65282839 -38212135 - L1MC LINE L1 -2734 3412 3198 4 1083 260 252 70 16 chr15 65282889 65283018 -38211956 - Lx9 LINE L1 -2 7471 7336 4 1083 351 271 18 49 chr15 65283014 65283190 -38211784 - Lx9 LINE L1 -454 7190 6887 4 1083 303 71 0 0 chr15 65283616 65283658 -38211316 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1083 976 314 76 65 chr15 65285584 65285685 -38209289 + MLT1E3 LTR MaLR 139 249 -375 4 1083 495 0 0 0 chr15 65285685 65285740 -38209234 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1083 976 314 76 65 chr15 65285740 65286112 -38208862 + MLT1E3 LTR MaLR 250 617 -7 4 1083 180 284 65 47 chr15 65287464 65287571 -38207403 - L2a LINE L2 -61 3365 3257 4 1083 202 197 41 27 chr15 65287718 65287791 -38207183 + (TATAA)n Simple_repeat Simple_repeat 2 75 0 4 1083 197 298 0 17 chr15 65288087 65288145 -38206829 - L3 LINE CR1 -569 3920 3864 4 1083 257 75 0 24 chr15 65288174 65288215 -38206759 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1083 37062 61 6 7 chr15 65288428 65294890 -38200084 - L1Md_T LINE L1 0 6582 128 4 1083 1074 254 153 3 chr15 65295451 65295771 -38199203 - ORR1D2 LTR MaLR 0 370 3 4 1083 25 51 0 0 chr15 65296437 65296476 -38198498 + AT_rich Low_complexity Low_complexity 1 39 0 4 1083 1716 179 55 57 chr15 65296476 65296897 -38198077 - Lx2B LINE L1 -791 5086 4667 4 1083 5890 191 17 9 chr15 65296890 65298747 -38196227 + Lx2B LINE L1 5079 6841 -159 4 1083 1565 297 39 11 chr15 65298794 65299328 -38195646 + Lx8 LINE L1 6923 7471 -2 4 1083 439 331 14 41 chr15 65299490 65299635 -38195339 + MER44B DNA MER2_type 7 147 -403 4 1083 1562 279 56 28 chr15 65299650 65300111 -38194863 + MER44B DNA MER2_type 76 549 -1 4 1083 535 301 102 35 chr15 65300275 65300764 -38194210 + L1M3 LINE L1 2114 2635 -3505 4 1083 1765 138 74 0 chr15 65300777 65301074 -38193900 - ORR1A2 LTR MaLR -8 319 1 4 1083 247 314 116 18 chr15 65301074 65301574 -38193400 + L1M3 LINE L1 2633 3181 -2959 4 1083 633 111 0 57 chr15 65301595 65301719 -38193255 - Lx LINE L1 -13 6641 6525 4 1083 3928 133 110 38 chr15 65301721 65302629 -38192345 + RMER17B LTR ERVK 3 947 -11 4 1083 655 194 76 35 chr15 65302631 65302802 -38192172 - Lx LINE L1 -112 6542 6365 4 1083 4152 114 47 23 chr15 65302802 65303682 -38191292 + Lx LINE L1 5416 6308 -346 4 1083 281 286 86 58 chr15 65303691 65303749 -38191225 - L1M3 LINE L1 -2310 3833 3772 4 1083 1444 72 129 10 chr15 65303749 65303958 -38191016 - L1_Mus1 LINE L1 0 6567 6334 4 1083 428 286 86 58 chr15 65303958 65304330 -38190644 - L1M3 LINE L1 -2372 3771 3388 4 1083 415 266 68 68 chr15 65304399 65304605 -38190369 + L1M3 LINE L1 3944 4149 -1994 4 1083 244 328 45 0 chr15 65304606 65304673 -38190301 + B3 SINE B2 1 70 -146 4 1083 483 221 19 125 chr15 65304892 65305042 -38189932 + B3A SINE B2 44 190 -8 4 1083 360 0 0 0 chr15 65305174 65305214 -38189760 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1083 2429 221 62 3 chr15 65305382 65305982 -38188992 + Lx9 LINE L1 6773 7407 -237 4 1083 5122 165 14 22 chr15 65305973 65306541 -38188433 + Lx2B LINE L1 4872 5448 -429 4 1083 1037 102 0 0 chr15 65306541 65306675 -38188299 + B1_Mus1 SINE Alu 1 134 -14 4 1083 225 0 0 0 chr15 65306675 65306700 -38188274 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 4 1083 1037 102 0 0 chr15 65306700 65306712 -38188262 + B1_Mus1 SINE Alu 135 146 -2 4 1083 7093 137 70 20 chr15 65306712 65307415 -38187559 + Lx2B LINE L1 5449 6153 -847 4 1083 1173 57 0 0 chr15 65307415 65307555 -38187419 + B1_Mus2 SINE Alu 2 141 -6 4 1083 1048 119 17 0 chr15 65307559 65307735 -38187239 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 4 1083 7093 129 86 19 chr15 65307735 65308475 -38186499 + Lx2B LINE L1 6154 6969 -31 4 1083 318 50 0 0 chr15 65308475 65308515 -38186459 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 4 1083 31 26 0 0 chr15 65308525 65308563 -38186411 + AT_rich Low_complexity Low_complexity 1 38 0 4 1083 4287 183 55 2 chr15 65308576 65309382 -38185592 + Lx5 LINE L1 6184 7031 -19 4 1083 231 88 0 0 chr15 65309382 65309416 -38185558 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 4 1083 205 303 30 15 chr15 65309693 65309760 -38185214 + MIR SINE MIR 85 152 -56 4 1083 931 311 35 126 chr15 65309765 65310162 -38184812 - MTEa LTR MaLR 0 379 19 4 1083 1053 86 0 7 chr15 65310169 65310309 -38184665 + B1_Mus1 SINE Alu 2 140 -8 4 1083 373 273 35 0 chr15 65311038 65311181 -38183793 - L1MA6 LINE L1 -28 6272 6125 4 1083 427 102 80 0 chr15 65311304 65311441 -38183533 + (TAGA)n Simple_repeat Simple_repeat 2 149 0 4 1083 230 324 126 0 chr15 65311442 65311649 -38183325 - Lx9 LINE L1 -174 7470 7238 4 1083 727 281 81 55 chr15 65311928 65312658 -38182316 - L1MA6 LINE L1 -189 6111 5333 4 1083 436 326 58 32 chr15 65313498 65313688 -38181286 + LTR87 LTR ERVL? 275 469 -155 4 1083 269 246 54 23 chr15 65313931 65313960 -38181014 + ORR1B1-int LTR MaLR 615 647 -862 4 1083 734 114 3 14 chr15 65313960 65314081 -38180893 + B1_Mus1 SINE Alu 2 114 -6 4 1083 539 306 0 6 chr15 65314301 65314434 -38180540 + B1F1 SINE Alu 1 129 -20 4 1083 307 170 10 83 chr15 65314531 65314627 -38180347 + L1M4 LINE L1 50 138 -6404 4 1083 246 32 0 0 chr15 65314628 65314659 -38180315 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1083 224 272 183 11 chr15 65314700 65314793 -38180181 + L2b LINE L2 3024 3132 -243 4 1083 419 132 11 0 chr15 65315314 65315405 -38179569 + (GA)n Simple_repeat Simple_repeat 2 93 0 4 1083 490 288 65 18 chr15 65315405 65315575 -38179399 - MLT1B LTR MaLR -212 178 1 4 1083 806 286 132 29 chr15 65316601 65316911 -38178063 - MTEa LTR MaLR -7 372 31 4 1083 4218 243 44 8 chr15 65317817 65318915 -38176059 + Lx5 LINE L1 5914 7050 0 4 1083 267 31 0 0 chr15 65319500 65319532 -38175442 + (CATA)n Simple_repeat Simple_repeat 2 33 0 4 1083 225 349 28 28 chr15 65319706 65319815 -38175159 - Lx8 LINE L1 -284 7189 7081 4 1083 1145 148 22 31 chr15 65319842 65320065 -38174909 - LTRIS5 LTR ERV1 0 447 227 4 1083 766 56 84 0 chr15 65320062 65320169 -38174805 - LTRIS5 LTR ERV1 -331 116 1 4 1083 2256 305 106 33 chr15 65320169 65321313 -38173661 - Lx8 LINE L1 -417 7056 5830 4 1083 350 298 53 0 chr15 65321325 65321496 -38173478 + L1_Mur3 LINE L1 4121 4300 -1580 4 1083 1582 178 84 21 chr15 65321769 65322102 -38172872 - ORR1B1 LTR MaLR 0 394 41 4 1083 547 291 52 8 chr15 65322215 65322467 -38172507 - L1MB7 LINE L1 -13 6171 5909 4 1083 4014 125 51 15 chr15 65322493 65323218 -38171756 + RMER17A LTR ERVK 1 751 0 4 1083 303 305 42 0 chr15 65323238 65323356 -38171618 - L1MB7 LINE L1 -359 5825 5703 4 1083 1538 208 37 0 chr15 65323357 65323684 -38171290 + Lx7 LINE L1 6874 7212 -484 4 1083 378 147 0 0 chr15 65323684 65323752 -38171222 + (GAAA)n Simple_repeat Simple_repeat 1 68 0 4 1083 1126 74 6 6 chr15 65323755 65323918 -38171056 + (GGAA)n Simple_repeat Simple_repeat 2 164 0 4 1083 822 209 59 79 chr15 65323919 65324273 -38170701 + Lx7 LINE L1 7216 7562 -134 4 1083 4053 227 13 11 chr15 65324321 65325196 -38169778 - Lx5 LINE L1 -12 7038 6163 4 1083 1949 164 63 5 chr15 65325198 65325585 -38169389 - L1_Mur2 LINE L1 -4202 1675 1267 4 1083 207 0 0 0 chr15 65325585 65325608 -38169366 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 4 1083 1949 168 54 1 chr15 65325608 65325883 -38169091 - L1_Mur2 LINE L1 -4611 1266 920 4 1083 452 218 65 0 chr15 65326240 65326364 -38168610 + Lx7 LINE L1 7560 7691 -5 4 1083 244 194 65 0 chr15 65326371 65326433 -38168541 - L1MC LINE L1 -627 5717 5652 4 1083 226 207 69 0 chr15 65326440 65326498 -38168476 - L1MB7 LINE L1 -604 5574 5513 4 1083 458 306 76 86 chr15 65326581 65326871 -38168103 - MER44A DNA MER2_type -52 287 1 4 1083 435 323 0 18 chr15 65327564 65327731 -38167243 + Lx8 LINE L1 6519 6682 -791 4 1083 2988 37 29 0 chr15 65327730 65328113 -38166861 + L1Md_F2 LINE L1 5193 5586 -297 4 1083 8169 43 1 0 chr15 65328113 65329096 -38165878 + L1Md_F2 LINE L1 5587 6570 -12 4 1083 21 0 0 0 chr15 65329104 65329125 -38165849 + AT_rich Low_complexity Low_complexity 1 21 0 4 1083 1220 305 75 82 chr15 65329604 65330369 -38164605 + Lx8 LINE L1 6713 7471 -2 4 1083 809 267 58 14 chr15 65331028 65331305 -38163669 + Lx7 LINE L1 7024 7312 -384 4 1083 432 147 0 0 chr15 65331321 65331396 -38163578 + (TG)n Simple_repeat Simple_repeat 2 76 0 4 1083 27 62 0 0 chr15 65331591 65331639 -38163335 + AT_rich Low_complexity Low_complexity 1 48 0 4 1083 988 263 98 17 chr15 65331658 65332210 -38162764 - L1MA9 LINE L1 -32 6280 5584 4 1083 311 290 54 50 chr15 65332336 65332597 -38162377 - L1MA9 LINE L1 -743 5397 5136 4 1083 234 205 61 49 chr15 65332773 65332855 -38162119 + L1M4 LINE L1 4299 4381 -1765 4 1083 757 286 18 41 chr15 65333077 65333296 -38161678 + B3A SINE B2 1 214 -2 4 1083 286 344 130 0 chr15 65334238 65334369 -38160605 - Lx8 LINE L1 -493 6980 6833 4 1083 726 300 87 7 chr15 65334365 65334640 -38160334 - Lx8 LINE L1 -879 6594 6298 4 1083 195 100 0 0 chr15 65335017 65335047 -38159927 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1083 1196 216 109 9 chr15 65335142 65335464 -38159510 + Lx7 LINE L1 6918 7271 -425 4 1083 1901 112 7 3 chr15 65335465 65335761 -38159213 - Lx5 LINE L1 -1153 5897 5601 4 1083 2608 96 3 37 chr15 65335761 65336139 -38158835 - RLTR8 LTR ERVK 0 365 1 4 1083 5237 84 49 3 chr15 65336139 65336914 -38158060 - SRV_MM-int LTR ERVK 0 6167 5357 4 1083 1222 54 0 0 chr15 65336914 65337061 -38157913 + B1_Mus2 SINE Alu 1 147 0 4 1083 364 15 14 68 chr15 65337064 65337137 -38157837 + (CAAAAA)n Simple_repeat Simple_repeat 2 70 0 4 1083 1632 51 0 40 chr15 65337147 65337373 -38157601 - SRV_MM-int LTR ERVK -799 5368 5152 4 1083 18785 76 15 12 chr15 65337373 65339976 -38154998 - SRV_MM-int LTR ERVK -3556 2611 2 4 1083 2329 110 31 6 chr15 65339977 65340333 -38154641 - RLTR8 LTR ERVK 0 365 1 4 1083 2533 207 130 16 chr15 65340333 65340641 -38154333 - Lx5 LINE L1 -279 5601 5258 4 1083 2926 81 8 2 chr15 65340641 65341039 -38153935 + MTB LTR MaLR 1 400 0 4 1083 2809 163 68 17 chr15 65341044 65341586 -38153388 - Lx LINE L1 -1 6653 6084 4 1083 2533 207 130 16 chr15 65341586 65341943 -38153031 - Lx5 LINE L1 -640 5240 4848 4 1083 2698 69 110 5 chr15 65341943 65342324 -38152650 - BGLII LTR ERVK 0 421 1 4 1083 2533 207 130 16 chr15 65342324 65342358 -38152616 - Lx5 LINE L1 -1033 4847 4815 4 1083 33784 43 1 3 chr15 65342361 65347551 -38147423 + L1Md_T LINE L1 317 5589 -297 4 1083 8365 32 6 0 chr15 65347551 65348541 -38146433 + L1Md_T LINE L1 5590 6585 0 4 1083 2435 157 4 2 chr15 65348541 65349001 -38145973 - Lx5 LINE L1 -1055 4822 4362 4 1083 6597 186 54 9 chr15 65348998 65350469 -38144505 + Lx5 LINE L1 5500 7049 -1 4 1083 508 236 32 0 chr15 65350478 65350601 -38144373 + Lx7 LINE L1 7262 7388 -308 4 1083 684 152 0 0 chr15 65350602 65350720 -38144254 + (TA)n Simple_repeat Simple_repeat 1 118 0 4 1083 251 194 129 0 chr15 65350771 65350833 -38144141 + Lx7 LINE L1 7627 7696 0 4 1083 2534 311 67 16 chr15 65351440 65352402 -38142572 + Lx8 LINE L1 6216 7215 -258 4 1083 315 0 0 0 chr15 65352402 65352437 -38142537 + (GA)n Simple_repeat Simple_repeat 1 35 0 5 1083 2534 311 67 16 chr15 65352437 65352669 -38142305 + Lx8 LINE L1 7216 7470 -3 4 1083 209 358 15 0 chr15 65353787 65353854 -38141120 - MIRm SINE MIR -103 173 106 5 1083 459 87 0 0 chr15 65354122 65354191 -38140783 + (GAAA)n Simple_repeat Simple_repeat 2 70 0 5 1083 1264 208 4 8 chr15 65354300 65354547 -38140427 + Lx5 LINE L1 6700 6945 -105 5 1083 540 56 0 0 chr15 65354549 65354621 -38140353 + (CA)n Simple_repeat Simple_repeat 1 72 0 5 1083 362 250 179 45 chr15 65354789 65354923 -38140051 - MLT1J2 LTR MaLR -56 392 241 5 1083 1418 43 0 0 chr15 65355074 65355258 -38139716 - Lx2 LINE L1 -1165 5832 5649 5 1083 5067 157 5 1 chr15 65355262 65356093 -38138881 + Lx LINE L1 5809 6642 -12 5 1083 683 24 0 12 chr15 65356095 65356181 -38138793 + (GAAA)n Simple_repeat Simple_repeat 4 88 0 5 1083 796 170 157 78 chr15 65357299 65357503 -38137471 + URR1B DNA MER1_type 1 220 -5 5 1083 366 162 0 56 chr15 65358526 65358598 -38136376 + HAL1-3A_ME LINE L1 1955 2022 -836 5 1083 328 189 0 36 chr15 65358616 65358726 -38136248 + (CATA)n Simple_repeat Simple_repeat 1 106 0 5 1083 297 325 61 33 chr15 65358737 65358950 -38136024 + L1MD2 LINE L1 6102 6320 -39 5 1083 7499 43 14 3 chr15 65359289 65360768 -38134206 + L1Md_F3 LINE L1 5076 6567 -17 5 1083 307 337 112 46 chr15 65360825 65361021 -38133953 - MLT1E LTR MaLR -75 578 370 5 1083 270 388 8 8 chr15 65361051 65361173 -38133801 - MLT1E LTR MaLR -396 164 43 5 1083 6349 32 3 0 chr15 65361235 65361993 -38132981 + L1Md_F3 LINE L1 5811 6570 -14 5 1083 252 352 47 16 chr15 65362126 65362253 -38132721 - MIRb SINE MIR -76 192 62 5 1083 2042 246 36 34 chr15 65362259 65362710 -38132264 - Lx6 LINE L1 -7 7453 6996 5 1083 1287 77 54 11 chr15 65362710 65362895 -38132079 - B2_Mm2 SINE B2 -2 193 1 5 1083 2042 246 36 34 chr15 65362895 65362966 -38132008 - Lx6 LINE L1 -465 6995 6930 5 1083 254 82 0 39 chr15 65362983 65363034 -38131940 + (TCTCTG)n Simple_repeat Simple_repeat 2 50 0 5 1083 194 306 0 0 chr15 65364728 65364777 -38130197 - MIRb SINE MIR -36 232 184 5 1083 709 300 89 34 chr15 65364928 65365197 -38129777 - B4 SINE B4 -5 287 4 5 1083 586 287 31 0 chr15 65365477 65365606 -38129368 + RSINE1 SINE B4 16 148 -17 5 1083 27 73 0 0 chr15 65365609 65365664 -38129310 + AT_rich Low_complexity Low_complexity 1 55 0 5 1083 499 258 0 20 chr15 65365818 65365917 -38129057 + PB1D10 SINE Alu 21 117 0 5 1083 935 285 35 28 chr15 65366016 65366298 -38128676 + B4 SINE B4 5 288 -4 5 1083 203 138 0 0 chr15 65366350 65366379 -38128595 + (TAAG)n Simple_repeat Simple_repeat 3 31 0 5 1083 326 333 0 158 chr15 65367724 65367888 -38127086 - RSINE1 SINE B4 0 165 28 5 1083 258 345 26 17 chr15 65368286 65368401 -38126573 - MLT1K LTR MaLR -79 516 401 5 1083 180 143 0 51 chr15 65368404 65368463 -38126511 + CT-rich Low_complexity Low_complexity 4 59 0 5 1083 2626 62 24 3 chr15 65369365 65369704 -38125270 - ORR1A1 LTR MaLR 0 346 1 5 1083 364 181 207 46 chr15 65369865 65369952 -38125022 - URR1A DNA MER1_type -125 101 1 5 1083 731 98 8 0 chr15 65370087 65370219 -38124755 + (TC)n Simple_repeat Simple_repeat 2 134 0 5 1083 288 0 0 0 chr15 65370219 65370250 -38124724 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1083 507 33 0 0 chr15 65370520 65370581 -38124393 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 1083 342 0 0 0 chr15 65371150 65371188 -38123786 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1083 274 333 100 0 chr15 65371321 65371441 -38123533 + MIRc SINE MIR 3 134 -134 5 1083 26 50 0 0 chr15 65373178 65373218 -38121756 + AT_rich Low_complexity Low_complexity 1 40 0 5 1083 189 0 0 0 chr15 65373286 65373307 -38121667 + (TAGTG)n Simple_repeat Simple_repeat 3 23 0 5 1083 203 152 0 0 chr15 65373538 65373571 -38121403 + T-rich Low_complexity Low_complexity 4 36 0 5 1083 184 308 0 0 chr15 65374638 65374690 -38120284 - MIRb SINE MIR -103 165 114 5 1083 453 348 43 103 chr15 65375344 65375626 -38119348 + B4 SINE B4 28 292 0 5 1083 327 265 24 0 chr15 65377008 65377091 -38117883 + RLTR40 LTR ERVK 1 85 -732 5 1083 865 278 109 33 chr15 65377092 65377486 -38117488 + Lx9 LINE L1 6914 7337 -307 5 1083 423 0 0 0 chr15 65377591 65377638 -38117336 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1083 447 100 0 0 chr15 65377718 65377788 -38117186 + (CA)n Simple_repeat Simple_repeat 1 70 0 5 1083 5996 48 8 9 chr15 65378418 65379177 -38115797 + L1Md_F2 LINE L1 5825 6582 0 5 1083 458 349 44 15 chr15 65379342 65379615 -38115359 - MamRep605 Unknown Unknown -543 333 53 5 1083 2698 168 17 15 chr15 65380136 65380663 -38114311 + RLTR11A LTR ERVK 1 528 0 5 1083 22 0 0 0 chr15 65381289 65381311 -38113663 + AT_rich Low_complexity Low_complexity 1 22 0 5 1083 219 239 61 25 chr15 65381789 65381855 -38113119 + B1_Mur4 SINE Alu 38 98 -22 5 1083 984 62 0 0 chr15 65381957 65382085 -38112889 + (TAGA)n Simple_repeat Simple_repeat 3 130 0 5 1083 351 35 53 0 chr15 65383282 65383339 -38111635 + (TAGA)n Simple_repeat Simple_repeat 4 63 0 5 1083 514 272 107 118 chr15 65383683 65383954 -38111020 - MER68 LTR ERVL -28 535 268 5 1083 1053 294 31 59 chr15 65383995 65384367 -38110607 - MTE2b LTR MaLR -6 413 5 5 1083 1199 43 0 0 chr15 65385194 65385333 -38109641 + B1_Mus1 SINE Alu 5 143 -5 5 1083 250 203 0 0 chr15 65385549 65385608 -38109366 + Lx8 LINE L1 7413 7471 -2 5 1083 1885 195 24 21 chr15 65385649 65386026 -38108948 + ORR1B1 LTR MaLR 13 390 -4 5 1083 417 270 155 51 chr15 65386210 65386501 -38108473 + MLT1B LTR MaLR 23 367 -100 5 1083 423 0 0 0 chr15 65386501 65386548 -38108426 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1083 394 316 170 36 chr15 65386548 65386591 -38108383 + MLT1B LTR MaLR 368 410 -57 5 1083 1384 300 22 25 chr15 65386601 65387397 -38107577 - Lx6 LINE L1 -26 7434 6455 5 1083 433 188 24 0 chr15 65387466 65387551 -38107423 + MTC LTR MaLR 1 87 -334 5 1083 2797 128 70 4 chr15 65387551 65388090 -38106884 - L1_Mur2 LINE L1 -2280 3597 3023 5 1083 4064 180 142 3 chr15 65388088 65389015 -38105959 + Lx4B LINE L1 5966 7021 -37 5 1083 1884 201 11 23 chr15 65389034 65389381 -38105593 + MTC LTR MaLR 71 413 -8 5 1083 216 346 0 47 chr15 65389546 65389631 -38105343 - MIR SINE MIR -67 141 61 5 1083 306 271 73 22 chr15 65390813 65390949 -38104025 + MIR SINE MIR 26 168 -94 5 1083 387 0 0 0 chr15 65390977 65391020 -38103954 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 1083 978 261 119 20 chr15 65392096 65392389 -38102585 - ORR1D2 LTR MaLR -48 322 1 5 1083 1260 210 179 0 chr15 65392458 65392755 -38102219 + MTD LTR MaLR 18 371 -48 5 1083 907 229 44 15 chr15 65392755 65392959 -38102015 + MTD LTR MaLR 1 210 -209 5 1083 13092 70 13 0 chr15 65392959 65394771 -38100203 - L1Md_F2 LINE L1 -653 5230 3396 5 1083 2672 41 3 0 chr15 65394771 65395113 -38099861 + L1Md_F2 LINE L1 5244 5586 -297 5 1083 7640 60 17 0 chr15 65395113 65396092 -38098882 + L1Md_F2 LINE L1 5587 6582 0 5 1083 952 213 66 5 chr15 65396225 65396423 -38098551 + MTD LTR MaLR 196 405 -14 5 1083 229 111 28 0 chr15 65396391 65396427 -38098547 + ORR1C2 LTR MaLR 340 376 -8 5 1083 451 295 0 35 chr15 65396687 65396803 -38098171 - RSINE1 SINE B4 -51 114 3 5 1083 212 291 59 26 chr15 65396806 65396927 -38098047 - MIRc SINE MIR -116 152 29 5 1083 379 233 8 8 chr15 65397283 65397413 -38097561 + (CA)n Simple_repeat Simple_repeat 2 131 0 5 1083 310 290 50 94 chr15 65398781 65398941 -38096033 + MIRc SINE MIR 38 190 -78 5 1083 275 153 76 45 chr15 65399708 65399782 -38095192 + PB1D10 SINE Alu 45 120 0 5 1083 400 299 12 109 chr15 65399809 65399974 -38095000 - Arthur1A DNA Tip100 -28 149 1 5 1083 274 319 0 0 chr15 65400111 65400180 -38094794 + MER63B DNA AcHobo 322 390 -46 5 1083 249 346 41 41 chr15 65400201 65400370 -38094604 + YREP_Mm Unknown Unknown 126 294 -1518 5 1083 895 256 75 10 chr15 65400254 65400455 -38094519 - ID_B1 SINE B4 0 224 11 5 1083 820 132 0 59 chr15 65400497 65400666 -38094308 - Lx3A LINE L1 -7 6974 6816 5 1083 1320 104 0 10 chr15 65400666 65400861 -38094113 + Lx3A LINE L1 6378 6570 -411 5 1083 402 287 34 20 chr15 65401184 65401330 -38093644 - Lx7 LINE L1 -728 6968 6821 5 1083 2445 150 23 19 chr15 65401351 65401779 -38093195 + RMER4A LTR ERVK 6 435 -31 5 1083 261 365 0 0 chr15 65401812 65401979 -38092995 + Lx8 LINE L1 7074 7240 -233 5 1083 477 90 0 0 chr15 65402158 65402225 -38092749 + (TA)n Simple_repeat Simple_repeat 2 68 0 5 1083 496 318 27 75 chr15 65402596 65402783 -38092191 + B4 SINE B4 1 178 -114 5 1083 33746 53 0 13 chr15 65402851 65404180 -38090794 + L1Md_Gf LINE L1 253 1661 -4225 5 1083 2643 97 120 0 chr15 65404180 65404604 -38090370 + IAPLTR2_Mm LTR ERVK 1 475 0 5 135 33746 41 0 3 chr15 65404604 65408542 -38086432 + L1Md_Gf LINE L1 1662 5589 -297 5 1084 8487 31 0 3 chr15 65408542 65409541 -38085433 + L1Md_T LINE L1 5587 6582 0 5 1084 230 314 11 44 chr15 65409979 65410069 -38084905 - LTR48 LTR ERV1 -17 770 684 5 1084 201 352 21 54 chr15 65410579 65410672 -38084302 - MER5B DNA MER1_type 0 178 89 5 1084 932 318 50 8 chr15 65410934 65411292 -38083682 + LTR55 LTR ERV 10 382 -166 5 1084 424 321 74 16 chr15 65411424 65411614 -38083360 - MT2A LTR ERVL 0 533 333 5 1084 2149 306 54 23 chr15 65411651 65411750 -38083224 + Lx8 LINE L1 6262 6360 -1113 5 1084 1862 173 35 0 chr15 65411750 65412097 -38082877 - RLTR15 LTR ERVK 0 359 1 5 1084 2149 306 54 23 chr15 65412097 65412898 -38082076 + Lx8 LINE L1 6361 7190 -283 5 1084 7019 85 42 2 chr15 65412892 65413914 -38081060 + Lx LINE L1 5587 6649 -5 5 1084 386 320 22 54 chr15 65413935 65414120 -38080854 + Lx8 LINE L1 7210 7388 -85 5 1084 1373 295 58 11 chr15 65414183 65414649 -38080325 - MERVL_2A-int LTR ERVL -294 5467 4980 5 1084 198 286 0 0 chr15 65414852 65414894 -38080080 - MER5A DNA MER1_type -130 59 18 5 1084 886 301 80 17 chr15 65415080 65415540 -38079434 - Lx8 LINE L1 -9 7464 6976 5 1084 929 247 0 0 chr15 65415718 65415941 -38079033 + Lx9 LINE L1 7230 7452 -192 6 1084 354 23 0 0 chr15 65415943 65415986 -38078988 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1084 213 65 0 0 chr15 65416250 65416281 -38078693 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 6 1084 220 194 26 53 chr15 65416289 65416390 -38078584 + T-rich Low_complexity Low_complexity 1 98 0 6 1084 29 60 0 0 chr15 65416748 65416798 -38078176 + AT_rich Low_complexity Low_complexity 1 50 0 6 1084 509 294 58 6 chr15 65416808 65416979 -38077995 + B3A SINE B2 1 180 -18 6 1084 270 358 119 22 chr15 65417402 65417722 -38077252 + L2 LINE L2 2470 2820 -599 6 1084 323 289 0 11 chr15 65417791 65417882 -38077092 + CT-rich Low_complexity Low_complexity 1 90 0 6 1084 349 222 0 0 chr15 65417796 65417859 -38077115 + polypyrimidine Low_complexity Low_complexity 1 63 0 6 1084 627 159 0 0 chr15 65417890 65418041 -38076933 + (TCTG)n Simple_repeat Simple_repeat 2 152 0 6 1084 226 209 0 0 chr15 65418186 65418229 -38076745 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 6 1084 1299 134 67 0 chr15 65418267 65418505 -38076469 - Lx9 LINE L1 -542 7102 6849 6 1084 1400 277 31 21 chr15 65418630 65419054 -38075920 - Lx8 LINE L1 -121 7352 6925 6 1084 302 43 65 0 chr15 65420014 65420060 -38074914 + (TTTTC)n Simple_repeat Simple_repeat 5 53 0 6 1084 374 121 0 15 chr15 65420188 65420255 -38074719 + (TTTC)n Simple_repeat Simple_repeat 4 69 0 6 1084 388 92 614 0 chr15 65420267 65420351 -38074623 - Lx2A LINE L1 -2 7006 6876 6 1084 192 40 0 0 chr15 65420351 65420376 -38074598 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 1084 239 117 200 0 chr15 65420376 65420412 -38074562 - Lx2A LINE L1 -133 6875 6828 6 1084 1796 85 11 7 chr15 65420412 65420685 -38074289 + MTB-int LTR MaLR 825 1098 0 6 1084 2771 71 55 3 chr15 65420685 65421065 -38073909 + MTB LTR MaLR 1 400 0 6 1084 228 259 74 0 chr15 65421112 65421166 -38073808 + B3 SINE B2 1 58 -158 6 1084 603 304 152 91 chr15 65421172 65421255 -38073719 - ORR1D2 LTR MaLR 0 370 259 6 1084 333 0 0 0 chr15 65421255 65421292 -38073682 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1084 387 0 0 0 chr15 65421292 65421334 -38073640 + (GA)n Simple_repeat Simple_repeat 1 43 0 6 1084 603 304 152 91 chr15 65421334 65421578 -38073396 - ORR1D2 LTR MaLR -112 258 23 6 1084 320 287 73 9 chr15 65421580 65421689 -38073285 - ORR1D2-int LTR MaLR -2 1368 1253 6 1084 411 261 70 28 chr15 65421661 65421803 -38073171 + B3 SINE B2 69 216 0 6 1084 558 43 0 0 chr15 65421906 65421975 -38072999 + (TC)n Simple_repeat Simple_repeat 2 70 0 6 1084 1532 229 38 67 chr15 65423583 65423993 -38070981 + MTD LTR MaLR 18 405 -14 6 1084 468 0 0 0 chr15 65425105 65425157 -38069817 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1084 468 286 0 0 chr15 65425746 65425858 -38069116 + PB1D10 SINE Alu 1 112 -5 6 1084 453 343 7 63 chr15 65428736 65428879 -38066095 - MER5A DNA MER1_type -54 135 1 6 1084 262 287 10 31 chr15 65428962 65429059 -38065915 + L2c LINE L2 3289 3383 -4 6 1084 207 0 0 0 chr15 65430025 65430048 -38064926 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1084 36196 16 0 7 chr15 65430050 65435236 -38059738 + L1Md_A LINE L1 442 5586 -297 6 1084 8712 17 4 0 chr15 65435236 65436228 -38058746 + L1Md_A LINE L1 5587 6582 0 6 1084 307 316 10 50 chr15 65436830 65436901 -38058073 + B4 SINE B4 195 264 -28 6 1084 342 0 0 0 chr15 65436901 65436939 -38058035 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1084 307 316 10 50 chr15 65436939 65436967 -38058007 + B4 SINE B4 265 290 -2 6 1084 240 253 71 31 chr15 65437381 65437479 -38057495 - MTEb LTR MaLR 0 379 278 6 1084 206 118 0 0 chr15 65437788 65437822 -38057152 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1084 3946 2 0 0 chr15 65437857 65438291 -38056683 - L1Md_T LINE L1 0 6582 6149 6 1084 5800 13 0 0 chr15 65438292 65438983 -38055991 + L1_Mm LINE L1 4908 5598 -285 6 1084 209 139 23 0 chr15 65440442 65440485 -38054489 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 6 1084 258 176 0 0 chr15 65440524 65440575 -38054399 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 1084 614 330 56 42 chr15 65442577 65442865 -38052109 + B4A SINE B4 1 292 0 6 1084 256 162 27 0 chr15 65442883 65442894 -38052080 + (CATA)n Simple_repeat Simple_repeat 4 14 0 6 1084 2001 189 83 33 chr15 65442894 65443375 -38051599 - RLTR16 LTR ERVK 0 505 1 6 1084 256 162 27 0 chr15 65443375 65443437 -38051537 + (CATA)n Simple_repeat Simple_repeat 3 65 0 6 1084 895 246 58 133 chr15 65443905 65444304 -38050670 + RMER15 LTR ERVL 188 556 -19 6 1084 776 329 42 37 chr15 65445524 65445877 -38049097 - MLT1A LTR MaLR -11 363 9 6 1084 187 370 62 56 chr15 65446253 65446448 -38048526 + MIRb SINE MIR 4 199 -69 6 1084 903 195 78 5 chr15 65446848 65447039 -38047935 + B3 SINE B2 3 207 -9 6 1084 341 326 22 0 chr15 65447583 65447672 -38047302 - B1F SINE Alu -58 91 1 6 1084 371 118 13 0 chr15 65447892 65447968 -38047006 + (CAGAGA)n Simple_repeat Simple_repeat 2 78 0 6 1084 193 288 76 0 chr15 65448145 65448211 -38046763 - MIR SINE MIR -1 261 191 6 1084 1703 189 47 60 chr15 65448621 65449004 -38045970 + ORR1C1 LTR MaLR 1 378 0 6 1084 3663 213 48 35 chr15 65449164 65450046 -38044928 + Lx5 LINE L1 6152 7044 -6 6 1084 684 205 108 28 chr15 65450291 65450431 -38044543 + B2_Mm2 SINE B2 1 153 -42 6 1084 590 0 14 0 chr15 65450431 65450501 -38044473 + (CAATA)n Simple_repeat Simple_repeat 3 73 0 6 1084 684 205 108 28 chr15 65450501 65450536 -38044438 + B2_Mm2 SINE B2 154 190 -5 6 1084 1082 267 70 13 chr15 65451320 65451620 -38043354 - MTE2a LTR MaLR 0 379 63 6 1084 363 319 82 34 chr15 65453191 65453337 -38041637 - MER2 DNA MER2_type -2 343 191 6 1084 1749 128 46 0 chr15 65453899 65454181 -38040793 + Lx LINE L1 6353 6647 -7 6 1084 1221 156 49 8 chr15 65455001 65455246 -38039728 + L1_Mur2 LINE L1 4789 5043 -834 6 1084 2756 111 32 2 chr15 65455244 65455685 -38039289 - L1_Mm LINE L1 -325 5558 5105 6 1084 940 124 0 0 chr15 65455683 65455828 -38039146 - L1_Mm LINE L1 -1255 4628 4484 6 1084 207 423 80 32 chr15 65455883 65456071 -38038903 + L2b LINE L2 3080 3276 -99 6 1084 2241 173 42 7 chr15 65456151 65456558 -38038416 + MTC LTR MaLR 1 421 0 6 1084 281 250 0 8 chr15 65456558 65456683 -38038291 + (TGGA)n Simple_repeat Simple_repeat 4 127 0 6 1084 1134 63 0 7 chr15 65456780 65456924 -38038050 + B1_Mm SINE Alu 5 147 0 6 1084 359 367 17 17 chr15 65457653 65457833 -38037141 - MIRb SINE MIR -8 260 81 6 1084 841 181 11 0 chr15 65457845 65458022 -38036952 + CT-rich Low_complexity Low_complexity 2 180 0 6 1084 345 47 0 0 chr15 65458023 65458066 -38036908 + (TTTCC)n Simple_repeat Simple_repeat 3 45 0 6 1084 455 274 76 23 chr15 65458334 65458506 -38036468 + MLT1D LTR MaLR 325 505 0 6 1084 239 226 39 0 chr15 65458548 65458650 -38036324 + (TAA)n Simple_repeat Simple_repeat 1 106 0 6 1084 1343 272 42 60 chr15 65458652 65459206 -38035768 - Lx8 LINE L1 -2 7471 6928 6 1084 985 273 85 62 chr15 65459209 65459561 -38035413 - ORR1D2 LTR MaLR -6 364 5 6 1084 227 250 31 15 chr15 65459562 65459627 -38035347 - Lx8 LINE L1 -554 6919 6854 6 1084 2077 253 20 41 chr15 65459660 65460269 -38034705 - Lx8 LINE L1 -615 6858 6263 6 1084 397 229 0 0 chr15 65460269 65460365 -38034609 + L1M3 LINE L1 5560 5655 -516 6 1084 1184 294 75 11 chr15 65460470 65460842 -38034132 + MTD LTR MaLR 24 419 0 6 1084 946 271 48 77 chr15 65461245 65461581 -38033393 - MLT1B LTR MaLR -20 370 45 6 1084 598 313 66 0 chr15 65461613 65461795 -38033179 + RMER30 DNA MER1_type 2 195 -7 6 1084 189 74 0 0 chr15 65461873 65461900 -38033074 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 6 1084 490 372 76 27 chr15 65462941 65463270 -38031704 + MLT1D LTR MaLR 145 489 -16 6 1084 228 350 42 0 chr15 65463557 65463677 -38031297 + (TGGA)n Simple_repeat Simple_repeat 1 125 0 6 1084 185 250 75 50 chr15 65464357 65464437 -38030537 - MIRc SINE MIR -168 100 19 6 1084 251 372 59 44 chr15 65464583 65464718 -38030256 + MLT1K LTR MaLR 99 235 -360 6 1084 290 333 13 0 chr15 65464759 65464909 -38030065 + CT-rich Low_complexity Low_complexity 1 152 0 6 1084 270 0 0 0 chr15 65466706 65466736 -38028238 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1084 238 316 13 0 chr15 65466992 65467068 -38027906 + MIR SINE MIR 41 117 -145 6 1084 1484 234 83 3 chr15 65467417 65467768 -38027206 - MTE2b LTR MaLR 0 379 1 6 1084 227 399 39 7 chr15 65468053 65468207 -38026767 + L2c LINE L2 3150 3308 -79 6 1084 224 250 81 171 chr15 65468244 65468270 -38026704 + PB1 SINE Alu 15 72 -55 6 1084 244 309 15 0 chr15 65468270 65468338 -38026636 + ID_B1 SINE B4 129 197 -27 6 1084 224 250 81 171 chr15 65468338 65468355 -38026619 + PB1 SINE Alu 73 115 -12 6 1084 238 349 12 0 chr15 65468898 65468984 -38025990 + MIRb SINE MIR 177 263 -5 6 1084 199 258 43 43 chr15 65470111 65470180 -38024794 + MIRb SINE MIR 43 111 -157 6 1084 378 0 0 0 chr15 65470742 65470784 -38024190 + (TC)n Simple_repeat Simple_repeat 1 42 0 6 1084 247 411 33 7 chr15 65470942 65471094 -38023880 - L2 LINE L2 -609 2810 2655 6 1084 437 34 17 0 chr15 65472250 65472309 -38022665 + (TAGA)n Simple_repeat Simple_repeat 4 63 0 6 1084 694 336 88 16 chr15 65472309 65472626 -38022348 + MER2 DNA MER2_type 4 343 -2 6 1084 396 0 0 0 chr15 65472712 65472756 -38022218 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1084 243 274 128 43 chr15 65472959 65473123 -38021851 + Lx8 LINE L1 7255 7432 -41 6 1084 1758 38 0 0 chr15 65473449 65473661 -38021313 + L1_Mus1 LINE L1 6356 6567 0 6 1084 381 58 0 0 chr15 65473759 65473811 -38021163 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1084 1614 53 10 0 chr15 65473985 65474194 -38020780 - L1Md_F2 LINE L1 -12 6570 6360 6 1084 398 65 15 62 chr15 65474194 65474249 -38020725 + L1Md_F2 LINE L1 6191 6245 -337 6 1084 429 70 0 0 chr15 65474605 65474662 -38020312 + (TC)n Simple_repeat Simple_repeat 1 57 0 6 1084 631 292 219 16 chr15 65475423 65475679 -38019295 + MLT1A0 LTR MaLR 11 318 -47 6 1084 189 286 0 0 chr15 65475946 65475988 -38018986 - L2c LINE L2 -80 3307 3266 6 1084 576 152 0 0 chr15 65476888 65477006 -38017968 + (TG)n Simple_repeat Simple_repeat 1 118 0 6 1084 277 366 21 7 chr15 65477087 65477230 -38017744 - MIR SINE MIR -18 244 100 7 1084 393 236 0 0 chr15 65477642 65477748 -38017226 + GA-rich Low_complexity Low_complexity 3 108 0 7 1084 240 35 0 0 chr15 65477801 65477830 -38017144 + (TA)n Simple_repeat Simple_repeat 1 29 0 7 1084 339 399 25 29 chr15 65479472 65479676 -38015298 - MER58A DNA MER1_type -18 206 4 7 1084 32287 78 7 6 chr15 65480114 65485668 -38009306 - L1Md_F2 LINE L1 -1 6584 925 7 1084 1336 116 0 0 chr15 65485666 65485864 -38009110 - L1_Mm LINE L1 -199 5684 5487 7 1084 3462 192 28 31 chr15 65485859 65486730 -38008244 - L1_Mur3 LINE L1 -2224 3653 2786 7 1084 3768 205 56 16 chr15 65486723 65487584 -38007390 - L1_Mur3 LINE L1 -6536 1192 298 7 1084 306 0 0 0 chr15 65487746 65487780 -38007194 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 7 1084 204 125 0 0 chr15 65487907 65487939 -38007035 + (TTG)n Simple_repeat Simple_repeat 1 32 0 7 1084 1188 291 87 73 chr15 65487939 65488212 -38006762 - Lx8 LINE L1 -133 7340 7045 7 1084 1408 121 9 0 chr15 65488212 65488435 -38006539 + L1_Mus3 LINE L1 6414 6638 0 7 1084 1188 291 87 73 chr15 65488435 65488792 -38006182 - Lx8 LINE L1 -429 7044 6701 7 1084 231 254 16 16 chr15 65488792 65488856 -38006118 - Lx8 LINE L1 -889 6584 6521 7 1084 387 298 118 30 chr15 65489113 65489248 -38005726 - B1F SINE Alu -1 148 2 7 1084 975 281 38 31 chr15 65490202 65490650 -38004324 + Lx6 LINE L1 109 559 -7169 7 1084 1357 177 7 20 chr15 65490646 65490946 -38004028 + Lx6 LINE L1 859 1154 -6574 7 1084 4728 225 51 4 chr15 65490946 65491983 -38002991 + Lx6 LINE L1 6171 7256 -204 7 1084 7956 39 2 6 chr15 65492009 65493278 -38001696 - L1Md_F2 LINE L1 -1 6581 5316 7 1084 634 279 6 0 chr15 65493281 65493442 -38001532 + Lx6 LINE L1 7294 7455 -5 7 1084 205 27 26 51 chr15 65493694 65493733 -38001241 + (TTG)n Simple_repeat Simple_repeat 2 39 0 7 1084 204 330 19 0 chr15 65494132 65494238 -38000736 + A-rich Low_complexity Low_complexity 1 108 0 7 1084 231 320 0 0 chr15 65494143 65494218 -38000756 + GA-rich Low_complexity Low_complexity 1 75 0 7 1084 1347 81 0 0 chr15 65494581 65494866 -38000108 + (GAAA)n Simple_repeat Simple_repeat 1 285 0 7 1084 581 40 13 0 chr15 65494868 65494944 -38000030 + (GGAA)n Simple_repeat Simple_repeat 3 79 0 7 1084 576 0 0 0 chr15 65495124 65495188 -37999786 + (GA)n Simple_repeat Simple_repeat 1 64 0 7 1084 260 342 80 18 chr15 65495651 65495764 -37999210 - B1F2 SINE Alu -23 126 7 7 1084 1425 218 57 3 chr15 65495979 65496315 -37998659 + Lx8 LINE L1 6587 6940 -533 7 1084 671 133 8 0 chr15 65496318 65496446 -37998528 + (TC)n Simple_repeat Simple_repeat 2 130 0 7 1084 1650 145 40 101 chr15 65496464 65496810 -37998164 + ORR1A4 LTR MaLR 5 329 0 7 1084 8015 152 16 14 chr15 65496811 65497049 -37997925 + ORR1A4-int LTR MaLR 2 243 -1720 7 1084 180 0 0 0 chr15 65497049 65497069 -37997905 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 7 1084 8015 152 16 14 chr15 65497069 65498233 -37996741 + ORR1A4-int LTR MaLR 244 1407 -556 7 1084 2865 15 3 43 chr15 65498234 65498585 -37996389 + IAPLTR1a_Mm LTR ERVK 1 337 0 7 1084 11086 28 73 0 chr15 65498585 65500000 -37994974 + IAPEz-int LTR ERVK 8 1525 -4956 7 1084 44940 19 1 1 chr15 65500000 65504958 -37990016 + IAPEz-int LTR ERVK 1526 6481 0 1 1084 3042 15 3 43 chr15 65504958 65505309 -37989665 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1084 1936 169 35 58 chr15 65505309 65505982 -37988992 + ORR1A4-int LTR MaLR 1001 1963 0 2 1084 1724 136 11 112 chr15 65505982 65506338 -37988636 + ORR1A4 LTR MaLR 1 320 -9 2 1084 351 0 0 0 chr15 65506338 65506377 -37988597 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1084 441 0 0 0 chr15 65506377 65506425 -37988549 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 1084 629 316 72 50 chr15 65506490 65506850 -37988124 + Lx8 LINE L1 7103 7470 -3 5 1084 356 343 125 75 chr15 65507219 65507619 -37987355 - HAL1 LINE L1 -601 1906 1487 6 1084 21 0 0 0 chr15 65507808 65507829 -37987145 + AT_rich Low_complexity Low_complexity 1 21 0 7 1084 4789 113 14 18 chr15 65507829 65508543 -37986431 - Lx3C LINE L1 -80 6896 6186 8 1084 1257 240 145 63 chr15 65508551 65508613 -37986361 - Lx9 LINE L1 -40 7604 7552 9 1084 576 0 0 0 chr15 65508613 65508677 -37986297 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 1084 1257 240 145 63 chr15 65508677 65509165 -37985809 - Lx9 LINE L1 -93 7551 7010 9 1084 1601 81 0 28 chr15 65509403 65509620 -37985354 - L1_Mus2 LINE L1 0 6566 6356 1 1084 214 231 36 27 chr15 65510403 65510514 -37984460 + (TAGA)n Simple_repeat Simple_repeat 1 112 0 1 1084 818 304 104 7 chr15 65510559 65510857 -37984117 + MLT1A0 LTR MaLR 39 365 0 1 1084 800 175 6 0 chr15 65510902 65511062 -37983912 + (CA)n Simple_repeat Simple_repeat 2 162 0 1 1084 253 93 18 18 chr15 65512133 65512188 -37982786 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 1 1084 260 103 0 0 chr15 65512194 65512233 -37982741 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 1 1084 401 89 0 2 chr15 65512233 65512295 -37982679 - B1_Mus2 SINE Alu 0 147 60 1 1084 232 347 61 27 chr15 65512342 65512490 -37982484 + MER2 DNA MER2_type 1 153 -192 1 1084 1857 152 93 12 chr15 65513153 65513485 -37981489 + RLTR15 LTR ERVK 1 359 0 1 1084 180 253 99 59 chr15 65513578 65513679 -37981295 - L3 LINE CR1 -3618 871 767 2 1084 219 339 74 8 chr15 65513781 65513903 -37981071 + MIRb SINE MIR 21 150 -118 2 1084 21 36 0 0 chr15 65513936 65513964 -37981010 + AT_rich Low_complexity Low_complexity 1 28 0 2 1084 5232 118 51 9 chr15 65515048 65516519 -37978455 - Lx4A LINE L1 -3 7055 5390 2 1084 456 19 0 0 chr15 65517012 65517065 -37977909 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1084 525 279 19 12 chr15 65517169 65517380 -37977594 - Lx7 LINE L1 -1475 5998 5789 2 1084 456 296 104 23 chr15 65517476 65517734 -37977240 + Lx7 LINE L1 6048 6328 -1368 2 1084 1376 318 31 4 chr15 65517784 65518242 -37976732 + Lx8 LINE L1 6517 6986 -487 2 1084 872 201 0 0 chr15 65518245 65518389 -37976585 + B1_Mus1 SINE Alu 5 148 0 2 1084 357 289 49 129 chr15 65518250 65518413 -37976561 + B4A SINE B4 94 243 -49 2 1084 375 23 0 0 chr15 65518413 65518457 -37976517 + (TAAAAA)n Simple_repeat Simple_repeat 1 44 0 3 1084 610 363 94 13 chr15 65518460 65518768 -37976206 + Lx8 LINE L1 6980 7289 -184 2 1084 393 22 0 0 chr15 65518768 65518814 -37976160 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1084 610 363 94 13 chr15 65518814 65518960 -37976014 + Lx8 LINE L1 7290 7470 -3 2 1084 591 310 107 62 chr15 65518980 65518999 -37975975 - B4A SINE B4 -8 284 263 3 1084 306 0 0 0 chr15 65518999 65519033 -37975941 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1084 591 310 107 62 chr15 65519033 65519285 -37975689 - B4A SINE B4 -30 262 1 3 1084 22 35 0 0 chr15 65520091 65520120 -37974854 + AT_rich Low_complexity Low_complexity 1 29 0 3 1084 501 328 45 19 chr15 65520188 65520396 -37974578 - B3A SINE B2 -3 213 2 3 1084 405 0 0 0 chr15 65520508 65520553 -37974421 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 1084 293 0 27 0 chr15 65521598 65521635 -37973339 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 3 1084 242 67 0 22 chr15 65521727 65521773 -37973201 - Lx LINE L1 -2 6652 6608 3 1084 539 352 94 4 chr15 65522565 65522799 -37972175 - Lx8 LINE L1 -137 7336 7082 3 1084 311 213 13 26 chr15 65526110 65526187 -37968787 + U2 snRNA snRNA 1 76 -112 4 1084 2174 132 28 0 chr15 65526492 65526810 -37968164 - ORR1A2 LTR MaLR 0 327 1 4 1084 524 127 0 0 chr15 65527326 65527405 -37967569 - Lx5 LINE L1 -740 5137 5059 4 1084 7393 183 22 24 chr15 65527405 65529300 -37965674 + Lx5 LINE L1 5151 7047 -3 4 1084 905 299 103 23 chr15 65529317 65529800 -37965174 + L1M4 LINE L1 4804 5325 -821 4 1084 554 177 62 0 chr15 65529820 65529916 -37965058 + RSINE1 SINE B4 16 117 -48 4 1084 567 257 274 19 chr15 65530222 65530488 -37964486 + MLT1G3 LTR MaLR 212 545 -50 4 1084 1210 186 86 74 chr15 65530594 65530945 -37964029 - ORR1C2 LTR MaLR -19 327 1 4 1084 182 305 104 9 chr15 65533289 65533382 -37961592 - MIR SINE MIR -33 229 127 4 1084 1184 180 37 5 chr15 65533382 65533600 -37961374 + URR1B DNA MER1_type 1 225 0 4 1084 182 305 104 9 chr15 65533600 65533612 -37961362 - MIR SINE MIR -136 126 115 4 1084 306 317 87 57 chr15 65534063 65534349 -37960625 - ORR1E LTR MaLR -4 374 75 4 1084 336 24 0 0 chr15 65534843 65534884 -37960090 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1085 1311 239 72 51 chr15 65536560 65536934 -37958040 - RLTR14 LTR ERV1 0 382 1 5 1085 1186 275 43 98 chr15 65537073 65537301 -37957673 + MTD LTR MaLR 5 210 -209 5 1085 2731 153 9 31 chr15 65537301 65537758 -37957216 + Lx2B LINE L1 6545 6991 -9 5 1085 660 26 0 0 chr15 65537758 65537836 -37957138 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 5 1085 1186 275 43 98 chr15 65537836 65538045 -37956929 + MTD LTR MaLR 211 418 -1 5 1085 1182 284 43 33 chr15 65538063 65538431 -37956543 + MERVL_2A-int LTR ERVL 1882 2253 -3508 5 1085 350 97 48 0 chr15 65538629 65538691 -37956283 + L1Md_F2 LINE L1 6518 6582 0 5 1085 2313 113 0 94 chr15 65538747 65539036 -37955938 + ORR1A2 LTR MaLR 1 287 -40 5 1085 1265 68 0 0 chr15 65539036 65539183 -37955791 + B1_Mus1 SINE Alu 2 148 0 5 1085 2313 113 0 94 chr15 65539183 65539198 -37955776 + ORR1A2 LTR MaLR 288 288 -39 5 1085 201 39 0 0 chr15 65539198 65539224 -37955750 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 1085 2313 113 0 94 chr15 65539224 65539279 -37955695 + ORR1A2 LTR MaLR 288 327 0 6 1085 1224 197 171 10 chr15 65539749 65540047 -37954927 + ORR1B2 LTR MaLR 1 346 -21 6 1085 2579 182 193 0 chr15 65540054 65540575 -37954399 + ORR1B2-int LTR MaLR 1 616 -893 6 1085 636 38 0 0 chr15 65540575 65540654 -37954320 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 6 1085 2579 182 193 0 chr15 65540654 65540698 -37954276 + ORR1B2-int LTR MaLR 617 674 -835 6 1085 2263 222 103 19 chr15 65540707 65541338 -37953636 - RMER1B Other Other -11 1055 215 6 1085 442 285 44 44 chr15 65541338 65541474 -37953500 + B1_Mus1 SINE Alu 13 148 0 6 1085 1329 251 0 45 chr15 65541389 65541566 -37953408 + ORR1B2-int LTR MaLR 708 883 -626 6 1085 3524 83 14 0 chr15 65541566 65542001 -37952973 - L1_Mus1 LINE L1 0 6567 6127 6 1085 1329 251 0 45 chr15 65542001 65542177 -37952797 + ORR1B2-int LTR MaLR 884 1045 -464 6 1085 1748 150 88 58 chr15 65542181 65542543 -37952431 - RLTR19 LTR ERVK -5 494 122 6 1085 837 191 168 72 chr15 65542542 65542887 -37952087 - RMER17C LTR ERVK -32 378 1 6 1085 8419 159 81 99 chr15 65542887 65543218 -37951756 - RMER17C-int LTR ERVK 0 3238 2900 6 1085 537 92 0 0 chr15 65543218 65543294 -37951680 + (CA)n Simple_repeat Simple_repeat 2 77 0 6 1085 8419 159 81 99 chr15 65543294 65543588 -37951386 - RMER17C-int LTR ERVK -339 2899 2600 6 1085 266 211 0 19 chr15 65543588 65543641 -37951333 + LSU-rRNA_Hsa rRNA rRNA 4202 4253 -782 6 1085 8419 159 81 99 chr15 65543641 65544125 -37950849 - RMER17C-int LTR ERVK -339 2599 2104 6 1085 1483 77 22 0 chr15 65544125 65544306 -37950668 + B2_Mm2 SINE B2 2 186 -9 7 1085 8419 159 81 99 chr15 65544306 65545149 -37949825 - RMER17C-int LTR ERVK -1135 2103 1269 6 1085 928 59 0 0 chr15 65545159 65545277 -37949697 - L1_Mus2 LINE L1 0 6566 6449 7 1085 3940 77 8 26 chr15 65545277 65545809 -37949165 + L1_Mus2 LINE L1 5909 6430 -136 7 1085 8050 65 7 2 chr15 65545842 65547553 -37947421 - L1Md_F2 LINE L1 -1 6581 4863 7 1085 39356 6 0 0 chr15 65547553 65552905 -37942069 + L1Md_A LINE L1 234 5586 -297 7 1085 9585 3 0 2 chr15 65552905 65553903 -37941071 + L1Md_A LINE L1 5587 6582 0 7 1085 189 0 0 0 chr15 65553932 65553953 -37941021 + (A)n Simple_repeat Simple_repeat 1 21 0 7 1085 1615 64 0 0 chr15 65553953 65554156 -37940818 - L1Md_F2 LINE L1 -1007 4876 4674 7 1085 998 277 65 154 chr15 65554169 65554944 -37940030 - RMER17C-int LTR ERVK -1968 1270 586 6 1085 506 89 0 43 chr15 65554944 65555038 -37939936 - L1Md_F2 LINE L1 0 6582 6493 7 1085 998 277 65 154 chr15 65555038 65555568 -37939406 - RMER17C-int LTR ERVK -2653 585 81 6 1085 638 224 39 108 chr15 65555625 65556073 -37938901 - RMER17C LTR ERVK -32 378 1 6 1085 656 123 122 9 chr15 65556073 65556188 -37938786 - RLTR19 LTR ERVK -371 128 1 7 1085 2592 175 24 2 chr15 65556188 65556647 -37938327 + ORR1B2-int LTR MaLR 1041 1509 0 7 1085 1428 172 74 140 chr15 65556647 65557040 -37937934 + ORR1B2 LTR MaLR 1 367 0 7 1085 420 356 121 0 chr15 65557238 65557477 -37937497 + L2a LINE L2 3146 3413 -13 7 1085 876 57 113 0 chr15 65557503 65557627 -37937347 + L1_Mus1 LINE L1 6430 6567 0 7 1085 692 225 101 43 chr15 65557647 65557856 -37937118 + RLTR20D LTR ERVK 5 225 -343 8 1085 679 252 0 31 chr15 65557860 65558020 -37936954 + RLTR20D LTR ERVK 397 551 0 8 1085 1426 254 79 14 chr15 65558026 65558382 -37936592 + MTEa LTR MaLR 1 379 0 8 1085 352 261 23 2 chr15 65559174 65559271 -37935703 + MLT1B LTR MaLR 1 97 -370 8 1085 1344 210 58 0 chr15 65559274 65559568 -37935406 + Lx9 LINE L1 7272 7572 -72 8 1085 2019 107 80 3 chr15 65559568 65559869 -37935105 + ORR1A2 LTR MaLR 1 324 -3 8 1085 1344 210 58 0 chr15 65559869 65559922 -37935052 + Lx9 LINE L1 7573 7638 -6 8 1085 232 140 140 0 chr15 65560022 65560068 -37934906 + MLT1A0 LTR MaLR 15 67 -298 8 1085 703 305 71 53 chr15 65560068 65560126 -37934848 - MTD LTR MaLR 0 419 364 8 1085 1703 176 73 38 chr15 65560126 65560497 -37934477 - ORR1C2 LTR MaLR 0 384 1 8 1085 703 305 71 53 chr15 65560497 65560623 -37934351 - MTD LTR MaLR -56 363 240 8 1085 3432 30 2 0 chr15 65560623 65561018 -37933956 - MTA_Mm LTR MaLR 0 396 1 8 1085 9486 15 14 0 chr15 65561018 65562101 -37932873 - MTA_Mm-int LTR MaLR 0 1098 1 8 1085 3445 28 2 0 chr15 65562101 65562496 -37932478 - MTA_Mm LTR MaLR 0 396 1 8 1085 703 308 52 26 chr15 65562496 65562689 -37932285 - MTD LTR MaLR -180 239 1 8 1085 356 264 0 33 chr15 65562689 65562764 -37932210 + MLT1A LTR MaLR 67 138 -236 8 1085 765 158 0 0 chr15 65562765 65562904 -37932070 + CT-rich Low_complexity Low_complexity 2 140 0 9 1085 336 181 90 67 chr15 65562969 65563058 -37931916 + MLT1A LTR MaLR 300 390 0 8 1085 201 94 0 0 chr15 65563323 65563355 -37931619 + (TTG)n Simple_repeat Simple_repeat 2 33 0 9 1085 356 264 93 19 chr15 65563598 65563706 -37931268 + B4 SINE B4 113 228 -64 9 1085 1097 239 101 17 chr15 65563708 65564113 -37930861 - L1_Mur3 LINE L1 -1651 4229 3791 9 1085 1608 303 58 40 chr15 65564109 65564924 -37930050 + Lx8 LINE L1 6419 7247 -226 9 1085 2465 162 39 72 chr15 65565312 65565852 -37929122 - RLTR11A LTR ERVK 0 528 7 9 1085 578 14 14 0 chr15 65565857 65565928 -37929046 + (GA)n Simple_repeat Simple_repeat 2 73 0 9 1085 227 354 12 47 chr15 65566030 65566116 -37928858 + B4A SINE B4 210 292 0 9 1085 4317 85 23 8 chr15 65566665 65567271 -37927703 - L1Md_F2 LINE L1 0 6582 5968 9 1085 2888 52 0 0 chr15 65567271 65567639 -37927335 + L1Md_F2 LINE L1 5599 5966 -616 9 1085 1685 168 11 102 chr15 65567883 65568334 -37926640 + RMER17C LTR ERVK 1 410 0 9 1085 183 358 116 27 chr15 65568524 65568636 -37926338 + L2b LINE L2 3240 3361 -14 9 1085 513 252 30 15 chr15 65568826 65568959 -37926015 + B1F SINE Alu 13 147 -2 1 1085 33818 35 1 0 chr15 65569130 65574971 -37920003 + L1Md_T LINE L1 1 5589 -297 1 1085 8981 8 0 0 chr15 65574971 65575967 -37919007 + L1Md_T LINE L1 5590 6585 0 1 1085 656 205 131 134 chr15 65576809 65577220 -37917754 - RMER17C LTR ERVK 0 410 1 1 1085 521 114 9 0 chr15 65578363 65578468 -37916506 + (TC)n Simple_repeat Simple_repeat 1 106 0 1 1085 974 276 41 88 chr15 65578782 65579123 -37915851 + MTEb LTR MaLR 55 379 0 1 1085 393 341 81 23 chr15 65579290 65579464 -37915510 + Lx8 LINE L1 6993 7176 -297 1 1085 320 356 0 55 chr15 65579497 65579607 -37915367 + RMER15 LTR ERVL 359 462 -113 1 1085 297 128 0 0 chr15 65579610 65579657 -37915317 + (CATA)n Simple_repeat Simple_repeat 4 50 0 1 1085 832 204 21 31 chr15 65579904 65580096 -37914878 - RMER17C LTR ERVK 0 410 221 1 1085 620 238 99 12 chr15 65580232 65580394 -37914580 - RMER5 LTR ERV1 -327 207 32 1 1085 1359 74 0 24 chr15 65580658 65580866 -37914108 + L1_Mus4 LINE L1 6434 6636 0 1 1085 1310 19 6 0 chr15 65580868 65581025 -37913949 + (GAA)n Simple_repeat Simple_repeat 3 160 0 1 1085 1451 283 119 43 chr15 65581075 65581426 -37913548 + MER67C LTR ERV1 27 372 -339 1 1085 273 57 0 0 chr15 65581426 65581461 -37913513 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1085 1451 283 119 43 chr15 65581461 65581733 -37913241 + MER67C LTR ERV1 373 697 -14 1 1085 192 40 0 0 chr15 65581735 65581760 -37913214 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1 1085 968 269 212 18 chr15 65581965 65582362 -37912612 + RMER5 LTR ERV1 50 523 -11 1 1085 288 0 0 0 chr15 65583234 65583266 -37911708 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1085 8181 34 1 0 chr15 65584100 65585064 -37909910 + L1Md_F2 LINE L1 5606 6570 -12 1 1085 182 320 141 0 chr15 65585997 65586075 -37908899 - L2c LINE L2 -5 3382 3294 1 1085 1800 234 44 22 chr15 65586884 65587590 -37907384 + Lx6 LINE L1 6466 7434 -26 1 1085 345 211 281 0 chr15 65587968 65588082 -37906892 + B1_Mus1 SINE Alu 2 147 -1 1 1085 1498 247 84 71 chr15 65588097 65588270 -37906704 - RLTR20A2 LTR ERVK 0 578 391 1 1085 2553 68 0 0 chr15 65588270 65588581 -37906393 + RLTR10E LTR ERVK 1 311 0 1 1085 1498 247 84 71 chr15 65588581 65588969 -37906005 - RLTR20A2 LTR ERVK -188 390 10 1 1085 6282 131 47 19 chr15 65588979 65589969 -37905005 - MYSERV16_I-int LTR ERVK 0 2326 1316 1 1085 1037 122 0 0 chr15 65589969 65590117 -37904857 - B1_Mus1 SINE Alu 0 148 1 1 1085 6282 181 52 37 chr15 65590117 65591218 -37903756 - MYSERV16_I-int LTR ERVK -1011 1315 68 1 1085 253 206 23 175 chr15 65591229 65591400 -37903574 - RMER3D-int LTR ERVK -1565 1277 1133 1 1085 1038 162 58 39 chr15 65591413 65591618 -37903356 + RLTR20C LTR ERVK 326 534 0 1 1085 862 37 0 0 chr15 65591665 65591774 -37903200 + L1_Mus2 LINE L1 6456 6564 -2 1 1085 470 336 7 7 chr15 65591788 65591932 -37903042 + MLT1A0 LTR MaLR 196 339 -26 1 1085 31106 77 9 7 chr15 65592093 65597110 -37897864 + L1Md_F2 LINE L1 559 5586 -297 1 1085 7321 75 12 4 chr15 65597111 65598098 -37896876 + L1Md_F2 LINE L1 5588 6582 0 1 1085 225 0 0 0 chr15 65598209 65598234 -37896740 + (TTA)n Simple_repeat Simple_repeat 1 25 0 1 1085 834 210 0 0 chr15 65598235 65598378 -37896596 - B1_Mur2 SINE Alu -6 143 1 1 1085 656 279 82 34 chr15 65598745 65599012 -37895962 - MLT1B LTR MaLR -108 282 3 1 1085 563 269 29 18 chr15 65600244 65600414 -37894560 + MLT2B4 LTR ERVL 1 172 -384 1 1085 272 346 30 0 chr15 65600751 65600884 -37894090 + ERVL-E-int LTR ERVL 4753 4889 -778 1 1085 3223 159 83 10 chr15 65601326 65601943 -37893031 - Lx5 LINE L1 0 7050 6389 1 1085 761 280 126 3 chr15 65604765 65605066 -37889908 - MER97b DNA MER1_type? -341 712 375 1 1085 229 238 15 37 chr15 65605088 65605223 -37889751 + CT-rich Low_complexity Low_complexity 1 132 0 1 1085 237 365 0 0 chr15 65605246 65605309 -37889665 - AluF_3 SINE Alu -102 209 147 1 1085 682 286 91 21 chr15 65605325 65605611 -37889363 - MER97b DNA MER1_type? -705 348 43 1 1085 387 0 0 0 chr15 65605905 65605948 -37889026 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 1 1085 483 308 16 24 chr15 65605991 65606114 -37888860 - RSINE1 SINE B4 -42 123 2 1 1085 297 75 0 0 chr15 65606123 65606163 -37888811 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 1 1085 453 305 151 46 chr15 65607465 65607688 -37887286 - MLT1A1 LTR MaLR 0 408 175 1 1085 216 0 0 0 chr15 65607688 65607712 -37887262 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 1 1085 453 305 151 46 chr15 65607712 65607773 -37887201 - MLT1A1 LTR MaLR -234 174 94 1 1085 541 279 80 57 chr15 65607787 65607851 -37887123 - B4 SINE B4 0 292 231 1 1085 369 0 0 0 chr15 65607851 65607892 -37887082 + (TATG)n Simple_repeat Simple_repeat 2 42 0 1 1085 541 279 80 57 chr15 65607892 65608002 -37886972 - B4 SINE B4 -62 230 115 1 1085 415 338 127 65 chr15 65608463 65608802 -37886172 + MLT1H LTR MaLR 190 549 0 1 1085 279 0 0 0 chr15 65609589 65609620 -37885354 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1085 519 17 0 0 chr15 65609620 65609679 -37885295 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 1085 482 290 96 11 chr15 65609680 65609858 -37885116 - B4 SINE B4 -99 193 1 1 1085 413 313 102 66 chr15 65609865 65610258 -37884716 - Kanga11a DNA Tc2 -361 609 203 1 1085 192 40 0 0 chr15 65610414 65610439 -37884535 + (ATTG)n Simple_repeat Simple_repeat 2 26 0 1 1085 401 230 115 0 chr15 65610450 65610537 -37884437 - PB1 SINE Alu -18 109 13 1 1085 227 444 22 8 chr15 65611243 65611377 -37883597 + MIRb SINE MIR 32 167 -101 1 1085 664 188 56 17 chr15 65612356 65612533 -37882441 + B3 SINE B2 13 186 -9 1 1085 1787 158 7 0 chr15 65612650 65612947 -37882027 - Lx9 LINE L1 -760 6884 6586 1 1085 2353 231 66 11 chr15 65612944 65613659 -37881315 + Lx9 LINE L1 6889 7642 -2 1 1085 374 69 17 0 chr15 65615763 65615821 -37879153 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 1085 871 305 68 7 chr15 65616503 65616813 -37878161 - MER2 DNA MER2_type -14 331 3 1 1085 341 174 14 0 chr15 65617094 65617163 -37877811 - MTE2b LTR MaLR -6 373 304 1 1085 552 202 80 58 chr15 65617158 65617295 -37877679 - B1_Mur1 SINE Alu 0 149 10 1 1085 244 308 46 0 chr15 65617308 65617373 -37877601 - MTE2b LTR MaLR -59 320 253 1 1085 643 134 13 36 chr15 65617433 65617557 -37877417 - MTE2b LTR MaLR -253 126 1 1 1085 23 0 0 0 chr15 65620387 65620410 -37874564 + AT_rich Low_complexity Low_complexity 1 23 0 1 1085 242 305 127 45 chr15 65620938 65621072 -37873902 - ID_B1 SINE B4 -1 223 79 1 1085 1489 265 23 20 chr15 65622086 65622440 -37872534 + MTE2b LTR MaLR 19 373 -6 1 1085 658 243 22 0 chr15 65622730 65622866 -37872108 - B1_Mm SINE Alu 0 147 9 1 1085 265 290 9 115 chr15 65622773 65622886 -37872088 - MT2B LTR ERVL -344 257 157 1 1085 474 240 14 110 chr15 65623313 65623458 -37871516 - MER20 DNA MER1_type -66 153 23 1 1085 192 179 0 0 chr15 65623868 65623907 -37871067 + (TAA)n Simple_repeat Simple_repeat 1 39 0 1 1085 25 51 0 0 chr15 65624445 65624484 -37870490 + AT_rich Low_complexity Low_complexity 1 39 0 1 1085 237 292 39 59 chr15 65624594 65624696 -37870278 - Charlie4z DNA MER1_type -26 141 42 1 1085 2253 179 134 25 chr15 65625248 65625769 -37869205 + RLTR20A2 LTR ERVK 1 578 0 1 1085 2852 147 44 22 chr15 65625982 65626482 -37868492 - Lx2B LINE L1 -2 6998 6488 1 1085 1163 68 0 0 chr15 65626588 65626736 -37868238 + B1_Mus1 SINE Alu 1 148 0 1 1085 190 73 0 47 chr15 65626739 65626782 -37868192 + (CAAAAA)n Simple_repeat Simple_repeat 1 41 0 1 1085 260 290 160 0 chr15 65626809 65626908 -37868066 + PB1D9 SINE Alu 8 119 -1 1 1085 331 300 30 10 chr15 65626940 65627041 -37867933 - PB1D7 SINE Alu -15 105 3 1 1085 188 0 74 0 chr15 65628245 65628272 -37866702 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1085 309 109 0 0 chr15 65629490 65629536 -37865438 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1085 1205 34 7 0 chr15 65629724 65629870 -37865104 - B1_Mus1 SINE Alu 0 148 2 1 1085 185 0 40 0 chr15 65631020 65631045 -37863929 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1085 5161 144 111 14 chr15 65631061 65631998 -37862976 - RLTR25B LTR ERVK 0 1028 1 1 1085 195 129 0 0 chr15 65632140 65632171 -37862803 + (TCC)n Simple_repeat Simple_repeat 2 32 0 1 1085 414 272 46 56 chr15 65632180 65632375 -37862599 - Lx9 LINE L1 -457 7187 6995 1 1085 183 42 0 0 chr15 65632379 65632403 -37862571 + (TTTTTA)n Simple_repeat Simple_repeat 1 24 0 1 1085 988 308 48 13 chr15 65632445 65632824 -37862150 - Lx9 LINE L1 -912 6732 6341 1 1085 228 333 43 0 chr15 65633182 65633251 -37861723 + ID4_ SINE ID 12 83 0 1 1085 25 51 0 0 chr15 65633441 65633480 -37861494 + AT_rich Low_complexity Low_complexity 1 39 0 1 1085 23 68 0 0 chr15 65634367 65634411 -37860563 + AT_rich Low_complexity Low_complexity 1 44 0 1 1085 475 303 96 83 chr15 65635482 65635867 -37859107 - MLT1B LTR MaLR 0 390 1 1 1085 248 303 121 81 chr15 65636224 65636538 -37858436 - MLT1C LTR MaLR 0 390 65 1 1085 265 333 122 24 chr15 65636985 65637108 -37857866 + B4 SINE B4 3 137 -155 1 1085 24 32 0 0 chr15 65637917 65637948 -37857026 + AT_rich Low_complexity Low_complexity 1 31 0 1 1085 21 0 0 0 chr15 65640065 65640086 -37854888 + AT_rich Low_complexity Low_complexity 1 21 0 1 1085 404 287 208 26 chr15 65640104 65640258 -37854716 - B3A SINE B2 -15 183 2 1 1085 640 264 75 63 chr15 65640369 65640543 -37854431 + B4 SINE B4 103 278 -14 1 1085 232 293 0 65 chr15 65640517 65640579 -37854395 + RSINE1 SINE B4 108 165 0 1 1085 319 79 111 0 chr15 65641230 65641293 -37853681 - Lx9 LINE L1 -19 7625 7556 1 1085 22 0 0 0 chr15 65641305 65641327 -37853647 + AT_rich Low_complexity Low_complexity 1 22 0 1 1085 432 0 0 0 chr15 65641925 65641973 -37853001 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1085 354 45 0 0 chr15 65641973 65642016 -37852958 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1085 261 0 0 0 chr15 65642154 65642183 -37852791 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1085 704 147 17 25 chr15 65643791 65643910 -37851064 - B1_Mur4 SINE Alu -31 119 2 1 1085 1027 234 5 18 chr15 65643910 65644128 -37850846 - B3 SINE B2 -1 215 1 1 1085 510 17 0 0 chr15 65644315 65644374 -37850600 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 1085 198 266 62 0 chr15 65644671 65644735 -37850239 - MIR SINE MIR -91 117 50 2 1085 3023 61 5 15 chr15 65644866 65645266 -37849708 - L1_Mus2 LINE L1 0 6566 6171 2 1085 272 328 89 52 chr15 65645613 65645883 -37849091 - L2a LINE L2 -3 3423 3144 2 1085 235 238 96 36 chr15 65646121 65646204 -37848770 + L2a LINE L2 3333 3420 -6 2 1085 1973 212 37 22 chr15 65647572 65647977 -37846997 + MTD LTR MaLR 1 411 -8 2 1085 430 255 27 54 chr15 65647980 65648092 -37846882 + PB1D10 SINE Alu 2 110 -7 2 1085 201 234 43 0 chr15 65648579 65648626 -37846348 - L2a LINE L2 -231 3156 3108 2 1085 183 283 0 0 chr15 65649355 65649401 -37845573 + L2a LINE L2 3375 3420 -6 2 1085 272 231 108 0 chr15 65649508 65649573 -37845401 + BC1_Mm scRNA scRNA 8 79 -73 2 1085 237 289 10 0 chr15 65650883 65650980 -37843994 + (TA)n Simple_repeat Simple_repeat 1 98 0 2 1085 222 37 0 0 chr15 65651246 65651273 -37843701 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 2 1085 433 230 240 45 chr15 65651998 65652394 -37842580 - L1M4 LINE L1 -789 5357 4885 2 1085 1207 204 98 82 chr15 65652689 65653057 -37841917 - ORR1D1 LTR MaLR 0 374 1 2 1085 583 294 89 23 chr15 65654377 65654635 -37840339 + B4A SINE B4 5 279 -13 2 1085 222 37 0 0 chr15 65655461 65655488 -37839486 + (TTA)n Simple_repeat Simple_repeat 3 29 0 2 1085 225 323 15 0 chr15 65655529 65655594 -37839380 - B4A SINE B4 -8 284 219 2 1085 672 231 7 47 chr15 65656732 65656882 -37838092 - B1_Mur3 SINE Alu 0 149 6 2 1085 395 247 64 11 chr15 65656798 65656892 -37838082 - B4 SINE B4 -113 179 81 2 1085 189 262 65 16 chr15 65656923 65656985 -37837989 + L2a LINE L2 3318 3382 -44 2 1085 310 271 30 100 chr15 65657501 65657731 -37837243 - Lx9 LINE L1 -32 7612 7399 2 1085 249 33 0 0 chr15 65658319 65658349 -37836625 + (TCCA)n Simple_repeat Simple_repeat 4 33 0 2 1085 5014 129 66 6 chr15 65658358 65659166 -37835808 - Lx4A LINE L1 -1 7057 6202 2 1085 3047 209 90 14 chr15 65659192 65659912 -37835062 - Lx6 LINE L1 -182 7278 6504 2 1085 347 326 5 77 chr15 65661456 65661652 -37833322 + B3A SINE B2 1 182 -16 2 1085 16704 57 1 1 chr15 65661696 65663908 -37831066 + L1Md_T LINE L1 3374 5586 -297 2 1085 8537 30 0 0 chr15 65663908 65664904 -37830070 + L1Md_T LINE L1 5587 6582 0 2 1085 1053 71 0 0 chr15 65664914 65665054 -37829920 + L1Md_F2 LINE L1 5447 5586 -297 2 1085 8112 48 0 3 chr15 65665055 65666051 -37828923 + L1Md_F2 LINE L1 5588 6580 -2 2 1085 375 113 0 0 chr15 65666583 65666645 -37828329 + (TC)n Simple_repeat Simple_repeat 2 63 0 2 1085 554 211 86 55 chr15 65666645 65666901 -37828073 - Lx7 LINE L1 -194 7502 7239 2 135 703 226 19 0 chr15 65666945 65667104 -37827870 - Lx7 LINE L1 -729 6967 6806 2 1086 201 154 0 0 chr15 65667105 65667144 -37827830 + A-rich Low_complexity Low_complexity 1 39 0 2 1086 1825 168 42 87 chr15 65667718 65667859 -37827115 + Lx7 LINE L1 7237 7359 -337 2 1086 273 119 0 0 chr15 65667859 65667901 -37827073 + (TCTG)n Simple_repeat Simple_repeat 3 44 0 2 1086 1825 168 42 87 chr15 65667901 65668241 -37826733 + Lx7 LINE L1 7360 7696 0 2 1086 557 172 151 32 chr15 65668626 65668752 -37826222 - B1F2 SINE Alu -7 142 2 2 1086 249 128 0 0 chr15 65670277 65670324 -37824650 + (A)n Simple_repeat Simple_repeat 1 47 0 2 1086 3243 242 64 39 chr15 65670327 65671285 -37823689 - Lx7 LINE L1 -333 7363 6382 2 1086 1088 288 58 8 chr15 65672242 65672694 -37822280 - Lx6 LINE L1 -146 7314 6431 2 1086 1314 238 51 23 chr15 65672732 65673038 -37821936 - Lx6 LINE L1 -709 6751 6206 2 1086 186 71 0 0 chr15 65673038 65673066 -37821908 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 1086 743 37 262 0 chr15 65673066 65673173 -37821801 - B1_Mus1 SINE Alu -13 135 1 2 1086 1314 218 107 50 chr15 65673173 65673545 -37821429 - Lx6 LINE L1 -818 6232 5808 2 1086 785 186 7 33 chr15 65673986 65674136 -37820838 - B1_Mus2 SINE Alu -1 146 1 2 1086 717 218 28 0 chr15 65674392 65674534 -37820440 - B1_Mur2 SINE Alu -2 147 2 2 1086 189 107 0 0 chr15 65675089 65675117 -37819857 + (TGG)n Simple_repeat Simple_repeat 1 28 0 2 1086 378 0 0 0 chr15 65675124 65675166 -37819808 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1086 564 228 93 7 chr15 65675322 65675499 -37819475 - B2_Mm2 SINE B2 0 216 1 2 1086 254 273 44 29 chr15 65675714 65675850 -37819124 - L1M1 LINE L1 -410 5890 5753 2 1086 384 303 191 44 chr15 65676009 65676261 -37818713 + B4 SINE B4 2 290 -2 2 1086 287 300 198 9 chr15 65676312 65676423 -37818551 + B1_Mur1 SINE Alu 4 135 -14 2 1086 255 125 0 0 chr15 65676432 65676472 -37818502 + (GGGA)n Simple_repeat Simple_repeat 3 42 0 2 1086 246 284 21 129 chr15 65676912 65677005 -37817969 - RSINE1 SINE B4 0 165 83 2 1086 893 260 34 5 chr15 65677056 65677265 -37817709 - B3 SINE B2 -1 215 1 2 1086 1247 34 0 0 chr15 65677686 65677832 -37817142 + B1_Mus2 SINE Alu 1 146 -1 2 1086 223 262 136 15 chr15 65678053 65678119 -37816855 - ID2 SINE ID -1 82 9 2 1086 395 295 34 39 chr15 65678127 65678269 -37816705 - B1F SINE Alu 0 149 6 2 1086 217 254 15 45 chr15 65679043 65679109 -37815865 + B4 SINE B4 79 142 -150 2 1086 24 0 0 0 chr15 65680147 65680171 -37814803 + AT_rich Low_complexity Low_complexity 1 24 0 2 1086 441 225 38 23 chr15 65680224 65680356 -37814618 - Lx7 LINE L1 0 7696 7563 2 1086 687 235 44 36 chr15 65680428 65680653 -37814321 - Lx7 LINE L1 -267 7429 7203 2 1086 602 202 134 48 chr15 65681065 65681252 -37813722 + B3 SINE B2 7 209 -7 2 1086 462 204 0 0 chr15 65682391 65682499 -37812475 + (TA)n Simple_repeat Simple_repeat 1 108 0 2 1086 26 74 0 0 chr15 65682601 65682655 -37812319 + AT_rich Low_complexity Low_complexity 1 54 0 2 1086 486 273 113 14 chr15 65683341 65683553 -37811421 - Lx9 LINE L1 -157 7487 7255 2 1086 2327 4 158 0 chr15 65685462 65685740 -37809234 + RLTRETN_Mm LTR ERVK 1 322 0 2 1086 1089 101 32 53 chr15 65686602 65686791 -37808183 - B2_Mm2 SINE B2 -9 186 2 2 1086 213 270 0 0 chr15 65687168 65687257 -37807717 + (TAGA)n Simple_repeat Simple_repeat 1 89 0 2 1086 314 266 0 0 chr15 65690397 65690461 -37804513 + B1F1 SINE Alu 2 65 -84 2 1086 570 289 71 74 chr15 65692045 65692551 -37802423 + L1MB3 LINE L1 5343 5873 -310 2 1086 301 228 54 11 chr15 65692590 65692683 -37802291 + L1MB3 LINE L1 6044 6140 -160 2 1086 366 284 0 0 chr15 65692690 65692771 -37802203 + RSINE1 SINE B4 4 84 -81 2 1086 386 232 21 21 chr15 65694333 65694430 -37800544 + B4A SINE B4 125 221 -71 2 1086 459 331 78 26 chr15 65694436 65694706 -37800268 + B4A SINE B4 1 284 -8 2 1086 1393 49 32 11 chr15 65694836 65695022 -37799952 + B2_Mm2 SINE B2 2 191 -4 2 1086 180 0 0 0 chr15 65696684 65696704 -37798270 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1086 644 238 23 81 chr15 65696794 65696968 -37798006 - B3A SINE B2 -33 165 2 2 1086 232 253 34 11 chr15 65697941 65698029 -37796945 + (TATG)n Simple_repeat Simple_repeat 3 92 0 2 1086 243 0 0 0 chr15 65699536 65699563 -37795411 + (TC)n Simple_repeat Simple_repeat 2 28 0 2 1086 864 196 0 0 chr15 65699564 65699743 -37795231 + (TA)n Simple_repeat Simple_repeat 2 180 0 2 1086 229 306 125 30 chr15 65700005 65700191 -37794783 - MIR SINE MIR -23 245 48 2 1086 228 111 0 0 chr15 65700626 65700662 -37794312 + (CAG)n Simple_repeat Simple_repeat 2 37 0 2 1086 243 297 273 0 chr15 65701329 65701457 -37793517 - RSINE1 SINE B4 0 165 3 2 1086 327 295 17 35 chr15 65701733 65701849 -37793125 - PB1D9 SINE Alu -5 115 2 2 1086 34 0 0 0 chr15 65702072 65702106 -37792868 + AT_rich Low_complexity Low_complexity 1 34 0 2 1086 324 0 0 0 chr15 65702324 65702360 -37792614 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1086 212 143 0 0 chr15 65702503 65702538 -37792436 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1086 258 32 0 0 chr15 65704121 65704152 -37790822 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1086 3861 125 47 5 chr15 65705521 65706138 -37788836 + RMER12 LTR ERVK 11 653 -669 2 1086 796 233 93 106 chr15 65706129 65706451 -37788523 + RMER12 LTR ERVK 1005 1322 0 2 1086 260 215 30 30 chr15 65706528 65706595 -37788379 + LTR16E2 LTR ERVL 496 562 -6 2 1086 369 362 140 41 chr15 65706874 65707217 -37787757 - LTR16E2 LTR ERVL -31 537 161 2 1086 2177 133 74 0 chr15 65708716 65709069 -37785905 + ORR1B1 LTR MaLR 3 381 -13 2 1086 246 152 0 0 chr15 65709073 65709132 -37785842 + CT-rich Low_complexity Low_complexity 2 60 0 2 1086 238 331 101 16 chr15 65709969 65710098 -37784876 + MIR SINE MIR 119 258 -10 2 1086 1197 48 0 7 chr15 65710728 65710876 -37784098 - B1_Mus1 SINE Alu -1 147 1 2 1086 189 302 70 0 chr15 65711312 65711398 -37783576 + MIRb SINE MIR 125 216 -52 2 1086 364 231 49 8 chr15 65712174 65712296 -37782678 + (TGGA)n Simple_repeat Simple_repeat 4 130 0 2 1086 244 78 0 56 chr15 65712460 65712514 -37782460 + (TTTTTG)n Simple_repeat Simple_repeat 3 53 0 2 1086 215 248 138 37 chr15 65713835 65713944 -37781030 + MIR3 SINE MIR 4 123 -85 2 1086 1107 187 134 67 chr15 65714739 65715083 -37779891 + ORR1D1 LTR MaLR 4 370 -4 2 1086 203 310 37 123 chr15 65715910 65716072 -37778902 - MIRc SINE MIR -113 155 8 2 1086 1627 87 84 74 chr15 65716507 65716783 -37778191 + ORR1A3 LTR MaLR 1 286 -60 2 1086 8911 11 0 0 chr15 65716783 65717779 -37777195 + L1Md_T LINE L1 5587 6582 0 2 1086 1498 155 60 157 chr15 65717779 65717821 -37777153 + ORR1A3 LTR MaLR 287 292 -54 2 1086 6680 31 1 0 chr15 65717821 65718603 -37776371 + L1Md_T LINE L1 5800 6582 0 2 1086 1300 58 0 0 chr15 65718611 65718783 -37776191 + L1Md_A LINE L1 6411 6582 0 2 1086 1498 155 60 157 chr15 65718783 65718837 -37776137 + ORR1A3 LTR MaLR 293 346 0 2 1086 367 278 56 0 chr15 65719326 65719434 -37775540 - MER53 DNA hAT -21 172 59 2 1086 342 182 79 35 chr15 65721622 65721736 -37773238 + BC1_Mm scRNA scRNA 7 125 -27 2 1086 246 174 0 0 chr15 65721737 65721783 -37773191 + A-rich Low_complexity Low_complexity 1 46 0 2 1086 544 278 9 52 chr15 65722163 65722360 -37772614 + ORR1E LTR MaLR 9 195 -199 3 1086 249 371 22 29 chr15 65722314 65722450 -37772524 + Lx8 LINE L1 7035 7169 -304 3 1086 285 271 52 0 chr15 65722628 65722724 -37772250 + RMER15 LTR ERVL 453 553 -22 3 1086 293 294 66 16 chr15 65722842 65722963 -37772011 + ORR1E LTR MaLR 253 379 0 3 1086 290 336 0 16 chr15 65723102 65723223 -37771751 + MIRb SINE MIR 28 146 -122 3 1086 278 265 15 0 chr15 65724635 65724703 -37770271 + PB1D10 SINE Alu 48 116 -1 3 1086 221 336 17 17 chr15 65727331 65727386 -37767588 + (CTA)n Simple_repeat Simple_repeat 2 57 0 3 1086 7306 62 6 0 chr15 65727386 65728274 -37766700 + RLTR13B1 LTR ERVK 1 893 0 3 1086 221 336 17 17 chr15 65728274 65728336 -37766638 + (CTA)n Simple_repeat Simple_repeat 3 64 0 3 1086 504 281 126 52 chr15 65729810 65730080 -37764894 + B4A SINE B4 1 290 -2 3 1086 561 47 35 0 chr15 65730146 65730231 -37764743 + (TA)n Simple_repeat Simple_repeat 2 89 0 3 1086 1800 262 33 15 chr15 65730259 65730713 -37764261 + Lx6 LINE L1 6999 7460 0 3 1086 736 104 7 7 chr15 65731693 65731828 -37763146 + Lx LINE L1 6520 6654 0 3 1086 284 278 14 76 chr15 65732277 65732421 -37762553 - LTR87 LTR ERVL? -19 605 471 3 1086 483 204 23 0 chr15 65732659 65732791 -37762183 - Lx9 LINE L1 0 7644 7510 3 1086 599 39 13 0 chr15 65733675 65733753 -37761221 + (TC)n Simple_repeat Simple_repeat 2 80 0 3 1086 284 215 15 15 chr15 65733789 65733855 -37761119 + GA-rich Low_complexity Low_complexity 1 66 0 3 1086 5630 37 1 5 chr15 65734218 65734878 -37760096 - L1Md_F2 LINE L1 -3 6579 5922 3 1086 213 65 0 0 chr15 65737202 65737233 -37757741 + (TA)n Simple_repeat Simple_repeat 2 32 0 3 1086 1426 66 22 0 chr15 65737444 65737627 -37757347 - B2_Mm2 SINE B2 -8 187 1 3 1086 913 154 7 20 chr15 65737638 65737790 -37757184 - B1_Mur4 SINE Alu 0 150 1 3 1086 778 251 35 25 chr15 65737860 65738060 -37756914 - B3 SINE B2 -14 202 1 3 1086 377 134 45 39 chr15 65739966 65740121 -37754853 + (CA)n Simple_repeat Simple_repeat 1 156 0 3 1086 461 302 71 5 chr15 65740154 65740350 -37754624 - Lx7 LINE L1 -375 7321 7113 3 1086 206 288 0 0 chr15 65741302 65741361 -37753613 + MER91A DNA Tip100 4 62 -134 3 1086 346 203 114 48 chr15 65742496 65742662 -37752312 + L1MB3 LINE L1 5988 6164 -19 3 1086 333 103 44 0 chr15 65742667 65742735 -37752239 + (TA)n Simple_repeat Simple_repeat 2 72 0 3 1086 21 36 0 0 chr15 65742863 65742891 -37752083 + AT_rich Low_complexity Low_complexity 1 28 0 3 1086 290 345 12 12 chr15 65743569 65743739 -37751235 + CT-rich Low_complexity Low_complexity 1 170 0 3 1086 394 272 77 26 chr15 65745111 65745228 -37749746 + ORR1E LTR MaLR 1 123 -236 3 1086 270 0 0 0 chr15 65745272 65745302 -37749672 + (TCTG)n Simple_repeat Simple_repeat 2 31 0 3 1086 486 0 0 0 chr15 65745911 65745965 -37749009 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 1086 1150 212 72 56 chr15 65746613 65746988 -37747986 - RLTR14 LTR ERV1 0 382 2 3 1086 261 368 90 0 chr15 65747658 65747791 -37747183 + MER77 LTR ERVL 53 197 -410 3 1086 298 339 20 9 chr15 65749766 65749906 -37745068 + MIRb SINE MIR 2 145 -131 3 1086 332 225 14 14 chr15 65750219 65750291 -37744683 - B3A SINE B2 -126 72 1 3 1086 279 349 39 16 chr15 65750650 65750778 -37744196 - LTR33A_ LTR ERVL -363 168 38 3 1086 688 75 16 8 chr15 65751127 65751248 -37743726 + L1_Mus3 LINE L1 6517 6638 0 3 1086 2694 47 3 0 chr15 65751633 65751955 -37743019 - L1Md_F2 LINE L1 -243 6339 6017 3 1086 1860 49 0 0 chr15 65751955 65752181 -37742793 + L1Md_F2 LINE L1 6345 6570 -12 3 1086 743 108 54 8 chr15 65752493 65752623 -37742351 - URR1B DNA MER1_type -1 224 89 3 1086 432 0 0 0 chr15 65753713 65753761 -37741213 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1086 351 0 0 0 chr15 65753771 65753810 -37741164 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1086 587 259 74 0 chr15 65753814 65753949 -37741025 - B3A SINE B2 -53 145 1 3 1086 393 109 0 0 chr15 65754842 65754906 -37740068 + (CAACT)n Simple_repeat Simple_repeat 2 65 0 3 1086 342 292 7 34 chr15 65754948 65755097 -37739877 + (CAACT)n Simple_repeat Simple_repeat 1 145 0 3 1086 401 0 20 0 chr15 65755956 65756005 -37738969 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1086 1064 237 202 3 chr15 65756044 65756360 -37738614 + MTEa LTR MaLR 1 379 0 3 1086 235 303 56 0 chr15 65756755 65756844 -37738130 - L2a LINE L2 -22 3404 3311 3 1086 435 83 0 0 chr15 65757019 65757079 -37737895 + (ATTTG)n Simple_repeat Simple_repeat 5 64 0 3 1086 256 220 0 0 chr15 65757445 65757504 -37737470 + LTR37A LTR ERV1 304 362 -64 3 1086 4662 134 56 21 chr15 65757637 65758508 -37736466 + RLTR13D6 LTR ERVK 1 902 0 3 1086 251 339 24 16 chr15 65758645 65758768 -37736206 - MIRb SINE MIR -19 249 126 3 1086 227 299 124 0 chr15 65759670 65759767 -37735207 + MIRb SINE MIR 146 254 -14 3 1086 230 237 65 0 chr15 65760741 65760834 -37734140 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 3 1086 4979 137 13 3 chr15 65763970 65764718 -37730256 + Lx4A LINE L1 6300 7055 -3 3 1086 499 253 129 36 chr15 65765241 65765434 -37729540 + B3 SINE B2 5 215 -1 3 1086 1614 42 0 0 chr15 65765549 65765741 -37729233 - B2_Mm1a SINE B2 -1 192 1 3 1086 540 68 0 0 chr15 65766089 65766162 -37728812 + (TGG)n Simple_repeat Simple_repeat 1 73 0 3 1086 247 293 0 0 chr15 65767236 65767311 -37727663 + L1MC4a LINE L1 7759 7833 -49 3 1086 279 0 0 0 chr15 65767316 65767347 -37727627 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1086 1093 86 0 0 chr15 65767347 65767486 -37727488 - B1_Mus1 SINE Alu -9 139 1 3 1086 470 210 92 21 chr15 65768801 65768942 -37726032 + RLTR12B LTR ERVK 47 197 -331 3 1086 1496 189 65 88 chr15 65768947 65769301 -37725673 + ORR1B1 LTR MaLR 41 386 -8 3 1086 567 236 46 211 chr15 65769345 65769738 -37725236 + RLTR12B LTR ERVK 189 516 -12 3 1086 342 0 0 0 chr15 65770828 65770866 -37724108 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1086 2962 86 10 2 chr15 65771078 65771475 -37723499 - MTB LTR MaLR 0 400 1 3 1086 7037 102 14 70 chr15 65771475 65772638 -37722336 - MTB-int LTR MaLR 0 1098 1 3 1086 2952 76 39 3 chr15 65772638 65773020 -37721954 - MTB LTR MaLR 0 396 1 3 1086 244 244 136 68 chr15 65773082 65773214 -37721760 - MER102c DNA MER1_type -125 206 66 3 1086 198 0 0 0 chr15 65774180 65774202 -37720772 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1086 2044 165 53 29 chr15 65775101 65775512 -37719462 + MTC LTR MaLR 1 421 0 3 1086 211 284 29 15 chr15 65775688 65775756 -37719218 - L2a LINE L2 0 3426 3358 3 1086 494 319 7 27 chr15 65775795 65775943 -37719031 + RSINE1 SINE B4 2 146 -19 3 1086 182 254 51 0 chr15 65776060 65776119 -37718855 + MIR SINE MIR 10 71 -191 3 1086 282 316 88 33 chr15 65776453 65776725 -37718249 + L1M5 LINE L1 5449 5735 -389 3 1086 1538 258 60 16 chr15 65776903 65777337 -37717637 + Lx7 LINE L1 6833 7285 -411 3 1086 324 70 0 0 chr15 65777405 65777448 -37717526 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 3 1086 1180 75 0 0 chr15 65777448 65777607 -37717367 - B2_Mm1t SINE B2 -33 160 2 3 1086 180 77 0 0 chr15 65777615 65777641 -37717333 + (TTTTG)n Simple_repeat Simple_repeat 4 29 0 3 1086 417 39 0 0 chr15 65777662 65777713 -37717261 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 3 1086 1659 256 47 24 chr15 65778336 65778828 -37716146 + RLTR11A2 LTR ERVK 7 509 -18 3 1086 1174 131 109 20 chr15 65778967 65779169 -37715805 - URR1A DNA MER1_type 0 226 7 3 1086 646 199 7 52 chr15 65779198 65779212 -37715762 + ID_B1 SINE B4 78 222 0 3 1086 1101 58 0 0 chr15 65779212 65779350 -37715624 + B1_Mm SINE Alu 10 147 0 3 1086 337 299 41 0 chr15 65780195 65780292 -37714682 + PB1D7 SINE Alu 19 119 -1 3 1086 1651 216 45 30 chr15 65780357 65780430 -37714544 + L1_Rod LINE L1 4727 4794 -1053 3 1086 1428 251 83 0 chr15 65780430 65780817 -37714157 - MTD LTR MaLR 0 419 1 3 1086 1651 216 45 30 chr15 65780817 65781211 -37713763 + L1_Rod LINE L1 4795 5201 -646 3 1086 35211 60 7 6 chr15 65781230 65787430 -37707544 + L1Md_F3 LINE L1 399 6582 -2 3 1086 515 224 40 25 chr15 65787424 65787614 -37707360 + L1_Rod LINE L1 5247 5452 -428 3 1086 21 36 0 0 chr15 65787631 65787659 -37707315 + AT_rich Low_complexity Low_complexity 1 28 0 3 1086 823 297 57 12 chr15 65787682 65788016 -37706958 + Lx9 LINE L1 7054 7402 -242 3 1086 39 0 0 0 chr15 65788154 65788193 -37706781 + AT_rich Low_complexity Low_complexity 1 39 0 3 1086 2664 250 45 28 chr15 65788371 65789199 -37705775 + Lx9 LINE L1 6699 7540 -104 3 1086 251 228 23 68 chr15 65789257 65789389 -37705585 + Lx9 LINE L1 7517 7642 -2 3 1086 231 340 10 10 chr15 65789485 65789583 -37705391 - MLT1E2 LTR MaLR -8 619 522 3 1086 31987 70 6 5 chr15 65789768 65794926 -37700048 + L1Md_A LINE L1 423 5586 -297 3 1086 8134 42 7 1 chr15 65794926 65795918 -37699056 + L1Md_F3 LINE L1 5587 6584 0 3 1086 340 346 22 51 chr15 65795932 65796069 -37698905 + L2a LINE L2 3293 3425 -1 3 1086 2755 85 52 0 chr15 65796156 65796557 -37698417 - BGLII_Mus LTR ERVK 0 422 1 3 1086 294 254 37 119 chr15 65797380 65797514 -37697460 + RLTR25A LTR ERVK 460 582 -521 3 1086 796 49 0 0 chr15 65797456 65797558 -37697416 + B1_Mm SINE Alu 46 147 0 3 1086 401 130 0 29 chr15 65797558 65797661 -37697313 + A-rich Low_complexity Low_complexity 1 100 0 3 1086 198 341 43 43 chr15 65797681 65797773 -37697201 - MER5B DNA MER1_type -66 112 21 3 1086 192 77 0 0 chr15 65798095 65798121 -37696853 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1087 324 0 0 0 chr15 65798381 65798417 -37696557 + (TC)n Simple_repeat Simple_repeat 2 37 0 3 1087 306 0 0 0 chr15 65798417 65798450 -37696524 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 1087 656 24 0 12 chr15 65798805 65798888 -37696086 + (GGAA)n Simple_repeat Simple_repeat 2 83 0 4 1087 343 84 36 45 chr15 65799071 65799183 -37695791 + A-rich Low_complexity Low_complexity 6 116 0 4 1087 1225 246 96 15 chr15 65799588 65799996 -37694978 + BGLII_B LTR ERVK 1 441 0 4 1087 1060 74 0 0 chr15 65800131 65800266 -37694708 + B1_Mus2 SINE Alu 1 135 -12 4 1087 311 0 0 25 chr15 65800268 65800308 -37694666 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1087 586 262 75 5 chr15 65800559 65800747 -37694227 - Lx8 LINE L1 -303 7170 6970 4 1087 504 143 27 0 chr15 65800788 65800900 -37694074 + (TCTA)n Simple_repeat Simple_repeat 3 117 0 4 1087 317 82 0 20 chr15 65801003 65801053 -37693921 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1087 2215 222 63 23 chr15 65801086 65801612 -37693362 + RMER15 LTR ERVL 15 561 -14 4 1087 860 260 5 0 chr15 65801647 65801843 -37693131 - Lx8 LINE L1 -121 7352 7156 4 1087 761 340 84 25 chr15 65802061 65802264 -37692710 - B4 SINE B4 0 292 81 4 1087 264 59 0 0 chr15 65802264 65802298 -37692676 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1087 761 340 84 25 chr15 65802298 65802369 -37692605 - B4 SINE B4 -212 80 2 4 1087 220 346 37 18 chr15 65802382 65802393 -37692581 - B4 SINE B4 -87 205 95 4 1087 400 245 41 0 chr15 65802393 65802491 -37692483 - PB1D9 SINE Alu -9 111 10 4 1087 214 341 0 3 chr15 65805118 65805191 -37689783 - MIRb SINE MIR -2 260 193 4 1087 875 305 108 62 chr15 65806165 65806682 -37688292 + MER34A LTR ERV1 13 553 -18 4 1087 582 289 0 0 chr15 65806861 65807010 -37687964 + B1F SINE Alu 1 149 0 4 1087 516 275 151 43 chr15 65809571 65809829 -37685145 - B4A SINE B4 -5 287 2 4 1087 185 246 60 60 chr15 65809916 65810033 -37684941 - L3 LINE CR1 -1831 2658 2542 4 1087 446 282 77 27 chr15 65810283 65810505 -37684469 + MER74A LTR ERVL 270 502 -56 4 1087 208 308 21 21 chr15 65810532 65810625 -37684349 + L2 LINE L2 1701 1793 -1626 4 1087 413 310 97 34 chr15 65810823 65811060 -37683914 + L2 LINE L2 2065 2316 -1103 4 1087 226 333 26 26 chr15 65811154 65811231 -37683743 - RSINE1 SINE B4 -12 153 77 4 1087 234 0 0 0 chr15 65811245 65811271 -37683703 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1087 353 362 12 75 chr15 65811306 65811467 -37683507 - B4A SINE B4 -141 151 1 4 1087 4375 179 54 8 chr15 65811519 65812351 -37682623 - Lx5 LINE L1 0 7050 6181 4 1087 477 241 0 0 chr15 65812351 65812434 -37682540 + B3 SINE B2 6 88 -128 4 1087 354 356 69 34 chr15 65812450 65812712 -37682262 + L2 LINE L2 2706 2976 -443 4 1087 478 291 133 46 chr15 65813769 65814032 -37680942 + B4A SINE B4 1 286 -6 4 1087 450 0 0 0 chr15 65814039 65814089 -37680885 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1087 569 321 53 16 chr15 65814237 65814427 -37680547 + MIR SINE MIR 12 208 -54 4 1087 270 21 20 41 chr15 65814641 65814690 -37680284 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 4 1087 276 214 86 67 chr15 65817531 65817636 -37677338 + MLT1J1 LTR MaLR 33 139 -305 4 1087 22 0 0 0 chr15 65818425 65818447 -37676527 + AT_rich Low_complexity Low_complexity 1 22 0 4 1087 378 0 0 0 chr15 65822827 65822869 -37672105 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1087 265 364 0 0 chr15 65822903 65822980 -37671994 - ID4 SINE ID -6 77 1 4 1087 334 284 43 8 chr15 65823030 65823147 -37671827 + Charlie22a DNA MER1_type 345 465 -26 4 1087 4907 126 32 4 chr15 65823635 65824406 -37670568 + Lx3A LINE L1 6189 6981 0 4 1087 408 282 8 39 chr15 65825923 65826052 -37668922 + LTR86A2 LTR ERVL 375 499 -9 4 1087 382 284 101 0 chr15 65827732 65827880 -37667094 + LTR86A1 LTR ERVL 119 281 -232 4 1087 402 319 35 52 chr15 65828176 65828348 -37666626 - MIR SINE MIR -40 228 53 4 1087 266 350 55 70 chr15 65828643 65828843 -37666131 - MIR SINE MIR -6 256 60 4 1087 670 258 107 10 chr15 65828949 65829145 -37665829 + B3 SINE B2 1 215 -1 4 1087 363 154 0 0 chr15 65829174 65829239 -37665735 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1087 222 331 112 28 chr15 65830222 65830365 -37664609 + MIRb SINE MIR 50 204 -64 4 1087 349 278 45 18 chr15 65830417 65830527 -37664447 - PB1D7 SINE Alu -1 119 7 4 1087 285 302 53 70 chr15 65830591 65830705 -37664269 + PB1D10 SINE Alu 5 116 -1 4 1087 21 36 0 0 chr15 65830747 65830775 -37664199 + AT_rich Low_complexity Low_complexity 1 28 0 4 1087 22 35 0 0 chr15 65830788 65830817 -37664157 + AT_rich Low_complexity Low_complexity 1 29 0 4 1087 431 0 17 0 chr15 65833195 65833253 -37661721 + B1_Mm SINE Alu 89 147 0 4 1087 203 0 0 36 chr15 65833256 65833284 -37661690 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 4 1087 459 318 81 89 chr15 65834363 65834722 -37660252 - ORR1E LTR MaLR 0 359 4 4 1087 505 345 11 23 chr15 65834722 65834861 -37660113 + ID_B1 SINE B4 80 216 -8 4 1087 209 294 0 42 chr15 65837256 65837327 -37657647 + GA-rich Low_complexity Low_complexity 6 73 0 4 1087 558 284 108 9 chr15 65837908 65838121 -37656853 + Tigger7 DNA MER2_type 2257 2490 -1 4 1087 298 265 114 29 chr15 65838326 65838431 -37656543 + Charlie4a DNA MER1_type 27 140 -368 4 1087 804 234 0 0 chr15 65838611 65838765 -37656209 - RSINE1 SINE B4 0 165 12 4 1087 687 25 0 0 chr15 65839079 65839160 -37655814 + (TTC)n Simple_repeat Simple_repeat 2 82 0 4 1087 217 349 0 0 chr15 65840751 65840837 -37654137 - MIR SINE MIR -96 166 81 4 1087 606 75 0 0 chr15 65841926 65842019 -37652955 + (GA)n Simple_repeat Simple_repeat 1 93 0 4 1087 569 284 111 57 chr15 65842602 65842953 -37652021 + MLT1C LTR MaLR 98 467 0 4 1087 232 308 0 0 chr15 65843733 65843811 -37651163 + MIR3 SINE MIR 125 202 -6 4 1087 255 265 25 17 chr15 65844153 65844248 -37650726 + MIR SINE MIR 99 191 -77 4 1087 262 277 44 25 chr15 65845326 65845485 -37649489 + (TCTA)n Simple_repeat Simple_repeat 1 162 0 4 1087 477 0 0 0 chr15 65846055 65846108 -37648866 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1087 247 309 53 0 chr15 65847221 65847315 -37647659 + MER44D DNA MER2_type 52 150 -555 4 1087 238 368 48 20 chr15 65847618 65847765 -37647209 + MIRb SINE MIR 50 200 -68 4 1087 213 39 0 0 chr15 65848155 65848181 -37646793 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1087 480 294 39 39 chr15 65848489 65848694 -37646280 - MIR SINE MIR -37 225 21 4 1087 302 293 100 0 chr15 65849341 65849491 -37645483 + L1MB7 LINE L1 6018 6182 -2 4 1087 623 231 119 0 chr15 65850424 65850558 -37644416 - RSINE1 SINE B4 -13 152 3 4 1087 290 352 29 88 chr15 65851564 65851735 -37643239 - MER5B DNA MER1_type -16 162 2 4 1087 342 0 0 0 chr15 65852875 65852913 -37642061 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1087 288 0 0 0 chr15 65853224 65853256 -37641718 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1087 923 293 88 9 chr15 65853513 65853830 -37641144 + ORR1E LTR MaLR 9 350 -9 4 1087 210 323 15 0 chr15 65854599 65854664 -37640310 + MIRb SINE MIR 176 241 -27 4 1087 273 57 0 0 chr15 65855509 65855544 -37639430 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 1087 423 0 0 0 chr15 65855545 65855592 -37639382 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1087 516 338 14 38 chr15 65855697 65855906 -37639068 + MER2 DNA MER2_type 142 345 0 4 1087 653 246 72 0 chr15 65857321 65857516 -37637458 + RMER4B LTR ERVK 17 225 -360 4 1087 571 251 118 43 chr15 65857545 65857807 -37637167 + RMER4B LTR ERVK 344 576 -9 4 1087 390 42 0 0 chr15 65857843 65857891 -37637083 + (TAA)n Simple_repeat Simple_repeat 1 48 0 4 1087 694 269 102 56 chr15 65858453 65858790 -37636184 + ORR1E LTR MaLR 2 368 -11 4 1087 216 0 0 0 chr15 65859707 65859731 -37635243 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1087 245 301 57 28 chr15 65859892 65859998 -37634976 - MIRb SINE MIR -114 154 46 4 1087 1465 192 50 66 chr15 65860859 65861066 -37633908 + ORR1D1 LTR MaLR 1 206 -168 4 1087 681 47 0 0 chr15 65861066 65861151 -37633823 + (TC)n Simple_repeat Simple_repeat 2 86 0 4 1087 1465 192 50 66 chr15 65861151 65861322 -37633652 + ORR1D1 LTR MaLR 207 373 -1 4 1087 2216 55 19 28 chr15 65861657 65861978 -37632996 - L1Md_F2 LINE L1 0 6582 6265 4 1087 860 68 0 0 chr15 65863232 65863349 -37631625 + L1_Mus2 LINE L1 6449 6565 -1 4 1087 21 0 0 0 chr15 65863392 65863413 -37631561 + AT_rich Low_complexity Low_complexity 1 21 0 4 1087 342 0 0 0 chr15 65864500 65864538 -37630436 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1087 260 222 0 53 chr15 65864632 65864708 -37630266 + (CA)n Simple_repeat Simple_repeat 2 73 0 4 1087 245 296 0 0 chr15 65864718 65864772 -37630202 + ID SINE ID 22 75 -149 4 1087 303 333 26 0 chr15 65864880 65864994 -37629980 + MER44D DNA MER2_type 5 121 -584 4 1087 359 339 44 17 chr15 65864994 65865174 -37629800 + MER44D DNA MER2_type 496 680 -25 4 1087 242 235 29 67 chr15 65867096 65867201 -37627773 + L1M2 LINE L1 5238 5338 -805 4 1087 244 133 33 0 chr15 65867207 65867267 -37627707 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 1087 333 0 0 0 chr15 65867692 65867729 -37627245 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1087 616 307 24 17 chr15 65868412 65868707 -37626267 + L1M4 LINE L1 2192 2488 -3658 4 1087 184 264 53 40 chr15 65869427 65869502 -37625472 + MIRb SINE MIR 128 203 -65 4 1087 426 312 87 0 chr15 65870232 65870405 -37624569 + MLT1F2 LTR MaLR 1 188 -372 4 1087 267 243 13 13 chr15 65870640 65870715 -37624259 + GA-rich Low_complexity Low_complexity 1 75 0 4 1087 238 218 0 18 chr15 65871185 65871241 -37623733 - PB1D10 SINE Alu -11 106 52 4 1087 239 333 21 43 chr15 65871705 65871799 -37623175 - MTEa LTR MaLR -287 92 1 4 1087 387 295 8 23 chr15 65871883 65872015 -37622959 + Lx8 LINE L1 7245 7374 -99 5 1087 534 320 40 35 chr15 65872454 65872655 -37622319 + MER58A DNA MER1_type 10 211 -13 5 1087 376 240 15 44 chr15 65872933 65873068 -37621906 + CT-rich Low_complexity Low_complexity 1 131 0 5 1087 236 213 62 47 chr15 65873070 65873134 -37621840 - ID2 SINE ID -4 79 15 5 1087 229 284 24 12 chr15 65873217 65873299 -37621675 - ID_B1 SINE B4 -41 183 101 5 1087 218 213 0 0 chr15 65873873 65873920 -37621054 + (TTA)n Simple_repeat Simple_repeat 1 47 0 5 1087 786 257 87 35 chr15 65876460 65876771 -37618203 + RMER5 LTR ERV1 51 377 -157 5 1087 2385 111 121 14 chr15 65876771 65877200 -37617774 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1087 1180 93 10 80 chr15 65877201 65877400 -37617574 + IAPEz-int LTR ERVK 9 193 -6288 5 1087 239 309 0 0 chr15 65877400 65877455 -37617519 + RLTR27 LTR ERVK 221 275 -34 5 1087 3809 56 26 18 chr15 65877455 65877946 -37617028 + IAPEz-int LTR ERVK 168 662 -5819 5 1087 2275 68 0 0 chr15 65877946 65878224 -37616750 + IAPEz-int LTR ERVK 1359 1636 -4845 5 1087 6131 49 4 12 chr15 65878223 65878973 -37616001 + IAPEz-int LTR ERVK 5736 6479 -2 5 1087 2385 111 121 14 chr15 65878975 65879404 -37615570 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1087 1197 110 28 62 chr15 65879405 65879685 -37615289 + IAPEz-int LTR ERVK 9 250 -7331 5 1087 239 309 0 0 chr15 65879685 65879740 -37615234 + RLTR27 LTR ERVK 221 275 -34 5 1087 3809 56 26 18 chr15 65879740 65880231 -37614743 + IAPEz-int LTR ERVK 168 662 -5819 5 1087 2287 65 0 0 chr15 65880231 65880509 -37614465 + IAPEz-int LTR ERVK 1359 1636 -4845 5 1087 6145 47 4 12 chr15 65880508 65881258 -37613716 + IAPEz-int LTR ERVK 5736 6479 -2 5 1087 2470 106 116 14 chr15 65881260 65881691 -37613283 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1087 1325 252 49 32 chr15 65881813 65882182 -37612792 + MTE2b LTR MaLR 1 375 -4 5 1087 838 31 0 0 chr15 65882220 65882318 -37612656 - L1_Mus3 LINE L1 -639 5999 5902 5 1087 2688 70 12 63 chr15 65882318 65882731 -37612243 + L1_Mus3 LINE L1 6242 6633 -5 5 1087 404 167 0 13 chr15 65884579 65884658 -37610316 + MT2B2 LTR ERVL 1 78 -506 5 1087 3609 161 124 143 chr15 65884596 65885447 -37609527 + ORR1B1-int LTR MaLR 627 1434 -529 5 1087 8478 39 1 1 chr15 65885447 65886443 -37608531 + L1Md_T LINE L1 5587 6582 0 5 1087 3609 161 124 143 chr15 65886443 65886739 -37608235 + ORR1B1-int LTR MaLR 1435 1752 -211 5 1087 1143 157 29 0 chr15 65886747 65886951 -37608023 + ORR1B1 LTR MaLR 185 394 0 5 1087 310 272 36 51 chr15 65887155 65887303 -37607671 - MLT1E2 LTR MaLR -125 528 358 5 1087 2221 16 0 0 chr15 65888420 65888667 -37606307 + L1Md_T LINE L1 4780 5026 -857 5 1087 36216 36 1 2 chr15 65888656 65894885 -37600089 + L1Md_T LINE L1 1 5589 -297 5 1087 9130 7 0 0 chr15 65894885 65895881 -37599093 + L1Md_T LINE L1 5590 6585 0 5 1087 5071 17 0 0 chr15 65895881 65896455 -37598519 + L1Md_T LINE L1 5013 5586 -297 5 1087 8597 35 0 0 chr15 65896455 65897451 -37597523 + L1Md_T LINE L1 5587 6582 0 5 1087 549 304 40 40 chr15 65897495 65897718 -37597256 - MER2 DNA MER2_type -102 243 21 5 1087 381 290 31 25 chr15 65900023 65900182 -37594792 + MER63D DNA AcHobo 46 205 -856 5 1087 718 240 104 144 chr15 65900409 65900804 -37594170 - MTE2a LTR MaLR 0 379 1 5 1087 355 337 58 6 chr15 65900981 65901154 -37593820 - MamRep434 DNA TcMar -142 284 103 5 1087 311 294 58 22 chr15 65901939 65902078 -37592896 - ORR1E LTR MaLR -162 197 54 5 1087 369 0 0 0 chr15 65902423 65902464 -37592510 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1087 235 243 200 19 chr15 65902715 65902820 -37592154 - MER5A1 DNA MER1_type -9 157 34 5 1087 269 257 28 14 chr15 65903371 65903442 -37591532 - MIR3 SINE MIR -47 161 90 5 1087 324 0 0 0 chr15 65903583 65903619 -37591355 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 1087 405 0 0 0 chr15 65903619 65903663 -37591311 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1087 414 0 0 0 chr15 65903682 65903728 -37591246 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 5 1087 620 187 31 31 chr15 65904167 65904294 -37590680 - Lx6 LINE L1 -293 7167 7041 5 1087 890 250 45 69 chr15 65904285 65904573 -37590401 + Lx6 LINE L1 7180 7460 0 5 1087 209 307 13 13 chr15 65905715 65905791 -37589183 + L2b LINE L2 3291 3366 -9 5 1087 189 0 0 0 chr15 65908428 65908449 -37586525 + (TC)n Simple_repeat Simple_repeat 2 22 0 5 1087 726 300 81 52 chr15 65908453 65908561 -37586413 - L1MA9 LINE L1 -40 6272 6164 5 1087 441 0 0 0 chr15 65908561 65908610 -37586364 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1087 726 300 81 52 chr15 65908610 65909018 -37585956 - L1MA9 LINE L1 -149 6163 5743 5 1087 883 107 6 23 chr15 65909204 65909377 -37585597 + (TA)n Simple_repeat Simple_repeat 2 171 0 5 1087 315 244 171 0 chr15 65909457 65909539 -37585435 - Lx8 LINE L1 -1091 6382 6287 5 1087 378 0 0 0 chr15 65909551 65909593 -37585381 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1087 3237 281 112 16 chr15 65909757 65910915 -37584059 - Lx8 LINE L1 0 7473 6205 5 1087 239 377 40 27 chr15 65911277 65911427 -37583547 + MLT1I LTR MaLR 259 410 -1 5 1087 381 22 0 0 chr15 65912088 65912134 -37582840 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1087 22 35 0 0 chr15 65912587 65912616 -37582358 + AT_rich Low_complexity Low_complexity 1 29 0 5 1087 545 287 42 57 chr15 65912633 65912825 -37582149 - B3A SINE B2 -9 189 1 5 1087 199 316 86 21 chr15 65913211 65913321 -37581653 - MIRc SINE MIR -103 165 48 5 1087 3311 49 7 2 chr15 65913326 65913734 -37581240 + L1Md_F3 LINE L1 6161 6570 -14 5 1087 264 247 14 0 chr15 65913747 65913820 -37581154 + L1MB4 LINE L1 6107 6180 0 5 1087 327 307 64 64 chr15 65914041 65914260 -37580714 - MIRb SINE MIR -22 246 28 5 1087 220 378 47 16 chr15 65914696 65914825 -37580149 + L2b LINE L2 3009 3141 -234 5 1087 402 125 0 0 chr15 65915007 65915087 -37579887 + (T)n Simple_repeat Simple_repeat 1 80 0 5 1087 217 402 10 0 chr15 65916181 65916278 -37578696 + MIRb SINE MIR 51 148 -120 5 1087 618 308 23 83 chr15 65916600 65916985 -37577989 + ORR1E LTR MaLR 12 361 -9 5 1087 2529 308 127 28 chr15 65916987 65918106 -37576868 + MTE-int LTR MaLR 1 1230 -350 5 1087 439 281 17 9 chr15 65918226 65918341 -37576633 + ORR1E LTR MaLR 256 371 -8 5 1087 311 279 0 35 chr15 65918621 65918736 -37576238 + L2a LINE L2 3315 3425 -1 5 1087 251 243 19 49 chr15 65919773 65920005 -37574969 + GA-rich Low_complexity Low_complexity 1 224 0 5 1087 2794 63 11 3 chr15 65920051 65920419 -37574555 + L1_Mus3 LINE L1 6267 6637 -1 5 1087 191 271 0 0 chr15 65921012 65921060 -37573914 + MIR SINE MIR 107 154 -108 5 1087 796 314 97 0 chr15 65921143 65921401 -37573573 + B4 SINE B4 6 288 -4 5 1087 426 39 0 0 chr15 65921429 65921481 -37573493 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1087 1713 242 53 38 chr15 65922036 65922564 -37572410 + Lx9 LINE L1 7106 7641 -3 5 1087 2091 190 93 129 chr15 65922747 65923381 -37571593 + RMER19C LTR ERVK 1 611 0 5 1087 216 83 41 20 chr15 65923977 65924026 -37570948 + (TTTTTG)n Simple_repeat Simple_repeat 4 53 0 5 1087 238 0 81 0 chr15 65924080 65924117 -37570857 + (TTTG)n Simple_repeat Simple_repeat 3 42 0 5 1087 629 330 31 38 chr15 65924216 65924506 -37570468 + Tigger7 DNA MER2_type 59 346 -2145 5 1087 229 250 0 0 chr15 65925237 65925285 -37569689 + CT-rich Low_complexity Low_complexity 3 50 0 5 1087 314 286 8 59 chr15 65925289 65925408 -37569566 - PB1D7 SINE Alu -7 113 1 5 1087 213 42 222 0 chr15 65926200 65926272 -37568702 + (CCTAT)n Simple_repeat Simple_repeat 4 91 0 5 1087 5675 2 0 0 chr15 65926992 65927606 -37567368 - L1Md_A LINE L1 0 6582 5969 5 135 860 322 143 50 chr15 65929060 65930388 -37564586 + L1M4 LINE L1 33 1484 -5058 5 1088 3465 55 23 7 chr15 65930539 65930978 -37563996 + L1Md_F2 LINE L1 6114 6559 -23 5 1088 894 234 15 5 chr15 65931001 65931199 -37563775 + B3 SINE B2 1 200 -16 5 1088 416 311 3 28 chr15 65931222 65931460 -37563514 + L1M4 LINE L1 2550 2765 -3879 5 1088 1191 279 77 24 chr15 65931469 65931936 -37563038 + L1M4 LINE L1 2913 3404 -3240 5 1088 319 301 105 5 chr15 65931933 65932143 -37562831 + L1M4 LINE L1 4902 5132 -1512 5 1088 223 26 50 25 chr15 65932959 65932999 -37561975 + (CAAAC)n Simple_repeat Simple_repeat 2 42 0 5 1088 536 350 24 16 chr15 65933830 65934077 -37560897 + B4A SINE B4 44 292 0 5 1088 410 0 0 20 chr15 65934098 65934149 -37560825 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1088 367 333 7 66 chr15 65934299 65934450 -37560524 - RSINE1 SINE B4 0 165 24 5 1088 315 247 0 0 chr15 65934450 65934527 -37560447 + L1MB7 LINE L1 6100 6176 -8 5 1088 1810 157 48 3 chr15 65934606 65934939 -37560035 - ORR1B1 LTR MaLR 0 394 47 5 1088 256 373 44 39 chr15 65936888 65937182 -37557792 - MTE2a LTR MaLR 0 379 80 5 1088 312 352 9 0 chr15 65937259 65937367 -37557607 - MLT2B3 LTR ERVL -445 109 1 5 1088 1628 254 152 27 chr15 65938344 65939385 -37555589 + Lx6 LINE L1 6058 7434 -26 5 1088 338 267 49 10 chr15 65939398 65939500 -37555474 - B4 SINE B4 -81 211 106 5 1088 553 302 75 23 chr15 65939548 65939758 -37555216 - L1MC1 LINE L1 -31 6302 6080 5 1088 1038 134 0 0 chr15 65939758 65939930 -37555044 + Lx2 LINE L1 6820 6991 -6 5 1088 465 71 0 0 chr15 65939932 65940002 -37554972 + (CAGAGA)n Simple_repeat Simple_repeat 2 71 0 5 1088 553 302 75 23 chr15 65940002 65940096 -37554878 - L1MC1 LINE L1 -254 6079 5984 5 1088 1435 69 11 0 chr15 65940160 65940349 -37554625 - B2_Mm1t SINE B2 -2 191 1 5 1088 1108 236 128 23 chr15 65940456 65940799 -37554175 - L1MC1 LINE L1 -553 5780 5402 5 1088 395 323 70 48 chr15 65940878 65941252 -37553722 - L1MC1 LINE L1 -846 5300 4919 5 1088 229 311 13 13 chr15 65941309 65941384 -37553590 - MER5A DNA MER1_type -114 75 1 5 1088 22 35 0 0 chr15 65941932 65941961 -37553013 + AT_rich Low_complexity Low_complexity 1 29 0 5 1088 311 182 29 29 chr15 65942344 65942412 -37552562 + MER58A DNA MER1_type 54 121 -103 5 1088 1003 280 58 11 chr15 65942914 65943192 -37551782 - B4A SINE B4 -1 291 1 5 1088 486 0 0 0 chr15 65944676 65944730 -37550244 + (TC)n Simple_repeat Simple_repeat 1 54 0 5 1088 306 0 0 0 chr15 65944730 65944763 -37550211 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1088 311 284 92 29 chr15 65945291 65945498 -37549476 - L1MA6 LINE L1 0 6300 6081 5 1088 3264 221 28 58 chr15 65945499 65946429 -37548545 - RCHARR1 DNA MER1_type -23 951 50 5 1088 252 280 105 13 chr15 65946429 65946581 -37548393 - L1MA6 LINE L1 -243 6057 5892 5 1088 466 354 7 18 chr15 65947628 65947965 -37547009 + GA-rich Low_complexity Low_complexity 1 333 0 5 1088 244 328 16 16 chr15 65948170 65948297 -37546677 + MLT2B4 LTR ERVL 66 192 -364 5 1088 234 0 0 0 chr15 65948424 65948450 -37546524 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 1088 242 263 18 0 chr15 65948583 65948640 -37546334 - ID4 SINE ID -23 60 3 5 1088 387 0 0 0 chr15 65949024 65949067 -37545907 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 5 1088 591 131 20 0 chr15 65949068 65949167 -37545807 - B1_Mur3 SINE Alu -24 125 25 5 1088 286 386 56 36 chr15 65949717 65949967 -37545007 + MER21B LTR ERV1 482 736 -127 5 1088 256 254 17 0 chr15 65950029 65950088 -37544886 - ID4 SINE ID -23 60 1 5 1088 470 288 88 25 chr15 65950291 65950576 -37544398 + Charlie4a DNA MER1_type 190 492 -16 6 1088 201 243 27 13 chr15 65951054 65951129 -37543845 + (TA)n Simple_repeat Simple_repeat 1 76 0 6 1088 639 0 0 0 chr15 65951148 65951219 -37543755 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 6 1088 395 155 12 0 chr15 65951841 65951925 -37543049 + GA-rich Low_complexity Low_complexity 3 87 0 6 1088 413 273 87 49 chr15 65954102 65954287 -37540687 - B3A SINE B2 -6 192 1 6 1088 342 241 106 40 chr15 65954687 65954838 -37540136 - MTD LTR MaLR 0 419 219 6 1088 577 317 161 9 chr15 65955544 65955690 -37539284 + L1MB5 LINE L1 5638 5818 -356 6 1088 423 0 0 0 chr15 65955690 65955737 -37539237 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1088 577 317 161 9 chr15 65955737 65956055 -37538919 + L1MB5 LINE L1 5819 6172 -2 6 1088 473 250 60 20 chr15 65956323 65956474 -37538500 - MTEb LTR MaLR -26 353 197 6 1088 298 344 21 0 chr15 65957188 65957284 -37537690 - Lx8 LINE L1 -204 7269 7172 6 1088 504 0 0 0 chr15 65957343 65957399 -37537575 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 1088 1049 207 16 25 chr15 65957856 65958136 -37536838 + RLTR20B1 LTR ERVK 80 369 -194 6 1088 2425 168 42 7 chr15 65959127 65959553 -37535421 + Lx5 LINE L1 6607 7047 -3 6 1088 21 36 0 0 chr15 65959561 65959589 -37535385 + AT_rich Low_complexity Low_complexity 1 28 0 6 1088 225 250 11 54 chr15 65960388 65960481 -37534493 + Charlie5 DNA MER1_type 37 125 -2499 6 1088 189 94 0 0 chr15 65961643 65961675 -37533299 + (T)n Simple_repeat Simple_repeat 1 32 0 6 1088 682 307 45 8 chr15 65961690 65961956 -37533018 + MTD LTR MaLR 20 295 -124 6 1088 630 0 0 0 chr15 65961980 65962050 -37532924 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 6 1088 522 207 0 0 chr15 65962050 65962166 -37532808 + (TA)n Simple_repeat Simple_repeat 1 116 0 6 1088 903 121 0 0 chr15 65962498 65962639 -37532335 + B2_Mm2 SINE B2 2 142 -53 6 1088 568 237 0 48 chr15 65965224 65965370 -37529604 + MTEa LTR MaLR 41 179 -200 6 1088 336 77 0 0 chr15 65965381 65965433 -37529541 + (GA)n Simple_repeat Simple_repeat 1 52 0 6 1088 484 248 89 7 chr15 65965436 65965582 -37529392 + MTEa LTR MaLR 168 325 -54 6 1088 221 288 0 0 chr15 65965582 65965641 -37529333 + CT-rich Low_complexity Low_complexity 2 60 0 6 1088 4196 134 50 30 chr15 65966977 65967718 -37527256 + RMER6A LTR ERVK 1 756 0 6 1088 226 318 60 33 chr15 65967866 65968048 -37526926 - MER3 DNA MER1_type -3 206 20 6 1088 738 262 78 10 chr15 65968061 65968265 -37526709 - ID_B1 SINE B4 -4 220 3 6 1088 384 77 0 0 chr15 65969486 65969538 -37525436 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1088 553 298 103 16 chr15 65969631 65969873 -37525101 - B4A SINE B4 -22 270 8 6 1088 1553 227 49 72 chr15 65972412 65972943 -37522031 - RMER5 LTR ERV1 -15 519 1 6 1088 1550 257 84 14 chr15 65973232 65973718 -37521256 + RMER5 LTR ERV1 15 534 0 6 1088 443 308 31 0 chr15 65974496 65974655 -37520319 - MIRb SINE MIR -72 196 33 6 1088 191 250 0 0 chr15 65974685 65974733 -37520241 - L2c LINE L2 0 3387 3340 6 1088 398 194 39 8 chr15 65976271 65976401 -37518573 + (CATA)n Simple_repeat Simple_repeat 2 135 0 6 1088 304 311 19 62 chr15 65976420 65976581 -37518393 + L1M6 LINE L1 8 161 -6335 6 1088 289 274 14 0 chr15 65976598 65976671 -37518303 + MIR SINE MIR 189 262 0 6 1088 252 288 195 7 chr15 65976977 65977131 -37517843 + L1M6 LINE L1 648 830 -5666 6 1088 234 81 0 0 chr15 65977516 65977553 -37517421 + (C)n Simple_repeat Simple_repeat 1 37 0 6 1088 228 310 24 12 chr15 65977798 65977883 -37517091 + MLT1C LTR MaLR 199 284 -183 6 1088 1587 292 69 22 chr15 65978008 65978648 -37516326 + Lx6 LINE L1 6432 7425 -35 6 1088 183 80 0 0 chr15 65978661 65978686 -37516288 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 6 1088 813 21 0 0 chr15 65980738 65980833 -37514141 + (TTTC)n Simple_repeat Simple_repeat 1 95 0 6 1088 203 270 138 62 chr15 65981478 65981608 -37513366 + MIR3 SINE MIR 6 145 -63 6 1088 297 0 0 0 chr15 65983298 65983331 -37511643 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1088 279 0 0 0 chr15 65983331 65983361 -37511613 + (GA)n Simple_repeat Simple_repeat 2 32 0 6 1088 717 12 0 0 chr15 65983398 65983480 -37511494 + (TC)n Simple_repeat Simple_repeat 1 82 0 6 1088 203 303 11 22 chr15 65983688 65983779 -37511195 - MIRb SINE MIR -94 174 85 6 1088 321 253 10 79 chr15 65984292 65984390 -37510584 + PB1D10 SINE Alu 11 103 -17 6 1088 427 33 0 32 chr15 65984393 65984456 -37510518 + (CAAAC)n Simple_repeat Simple_repeat 5 65 0 6 1088 696 83 0 0 chr15 65984527 65984623 -37510351 + (TCTTG)n Simple_repeat Simple_repeat 2 97 0 6 1088 372 143 0 0 chr15 65985077 65985161 -37509813 + (TA)n Simple_repeat Simple_repeat 2 85 0 6 1088 423 0 0 0 chr15 65985161 65985208 -37509766 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1088 30 27 0 0 chr15 65985701 65985738 -37509236 + AT_rich Low_complexity Low_complexity 1 37 0 6 1088 1094 60 0 0 chr15 65985832 65985981 -37508993 - L1Md_F2 LINE L1 0 6582 6434 6 1088 425 267 10 0 chr15 65986321 65986422 -37508552 + MTEa LTR MaLR 68 169 -210 6 1088 252 73 73 0 chr15 65986424 65986479 -37508495 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 6 1088 369 109 0 0 chr15 65986519 65986574 -37508400 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 6 1088 891 0 0 0 chr15 65986705 65986804 -37508170 + (TTC)n Simple_repeat Simple_repeat 2 100 0 6 1088 233 216 40 13 chr15 65988023 65988098 -37506876 - Lx8 LINE L1 -13 7460 7384 6 1088 384 22 0 0 chr15 65988282 65988327 -37506647 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1088 372 223 0 0 chr15 65988336 65988439 -37506535 + GA-rich Low_complexity Low_complexity 1 103 0 6 1088 267 246 0 0 chr15 65988439 65988496 -37506478 - Lx8 LINE L1 -142 7331 7275 6 1088 782 266 44 0 chr15 65988564 65988767 -37506207 - B3 SINE B2 0 216 5 6 1088 408 82 0 0 chr15 65989793 65989854 -37505120 + (TTTA)n Simple_repeat Simple_repeat 4 64 0 6 1088 1094 65 29 0 chr15 65989862 65990001 -37504973 - B1_Mus1 SINE Alu -4 144 2 6 1088 582 186 0 36 chr15 65990607 65990774 -37504200 + (TGGA)n Simple_repeat Simple_repeat 4 164 0 6 1088 254 278 65 26 chr15 65991189 65991344 -37503630 - L1ME4a LINE L1 -5 6119 5959 6 1088 290 305 105 38 chr15 65994707 65994840 -37500134 - MER3 DNA MER1_type -67 142 1 6 1088 3477 23 5 0 chr15 65995048 65995442 -37499532 + MTA_Mm LTR MaLR 1 396 0 6 1088 227 103 0 25 chr15 65995681 65995721 -37499253 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 6 1088 1097 235 45 104 chr15 65995895 65996298 -37498676 + MTE2a LTR MaLR 1 379 0 6 1088 256 208 0 0 chr15 65997064 65997117 -37497857 - B1F SINE Alu -7 142 90 6 1088 1010 249 170 0 chr15 65997998 65998031 -37496943 - MTEa LTR MaLR -8 371 324 6 1088 1358 48 0 0 chr15 65998031 65998198 -37496776 + L1Md_A LINE L1 6415 6581 -1 6 1088 1010 249 170 0 chr15 65998198 65998481 -37496493 - MTEa LTR MaLR -56 323 2 6 1088 333 284 0 78 chr15 65999845 65999998 -37494976 - HAL1-2a_MD LINE L1 -522 2502 2362 6 1088 4078 195 62 40 chr15 66001578 66002179 -37492795 + Lx5 LINE L1 6146 6779 -271 1 1088 291 28 0 0 chr15 66002179 66002215 -37492759 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1088 4078 195 62 40 chr15 66002215 66002483 -37492491 + Lx5 LINE L1 6780 7034 -16 1 1088 609 14 0 0 chr15 66002486 66002556 -37492418 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 3 1088 470 267 107 31 chr15 66002584 66002808 -37492166 + LTR82B Low_complexity ERVL 62 302 -528 4 1088 318 26 0 0 chr15 66003360 66003399 -37491575 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1088 265 276 131 19 chr15 66007262 66007369 -37487605 - MIR SINE MIR -133 129 11 6 1088 208 360 0 9 chr15 66007395 66007510 -37487464 + (CATATA)n Simple_repeat Simple_repeat 2 115 0 7 1088 415 313 63 53 chr15 66008009 66008098 -37486876 - MER20 DNA MER1_type -11 208 123 8 1088 1543 229 128 11 chr15 66008098 66008474 -37486500 - MTC LTR MaLR 0 421 2 9 1088 415 313 63 53 chr15 66008474 66008590 -37486384 - MER20 DNA MER1_type -97 122 1 8 1088 615 270 41 31 chr15 66009017 66009212 -37485762 - B3A SINE B2 -1 197 1 1 1088 201 286 54 0 chr15 66009587 66009643 -37485331 + L3 LINE CR1 4312 4370 -119 1 1088 231 114 0 0 chr15 66009643 66009678 -37485296 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 1 1088 378 270 54 9 chr15 66010008 66010120 -37484854 - LTR16E1 LTR ERVL 0 538 422 1 1088 689 98 9 0 chr15 66010707 66010819 -37484155 + (CATA)n Simple_repeat Simple_repeat 1 113 0 1 1088 528 261 0 0 chr15 66014270 66014385 -37480589 - RSINE1 SINE B4 -48 117 3 1 1088 202 253 48 91 chr15 66017425 66017612 -37477362 + MIR SINE MIR 11 189 -73 1 1088 1285 263 91 28 chr15 66017949 66017978 -37476996 - MTE2a LTR MaLR -2 377 350 1 1088 351 0 0 0 chr15 66017978 66018017 -37476957 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1088 1285 263 91 28 chr15 66018017 66018339 -37476635 - MTE2a LTR MaLR -30 349 4 1 1088 21 0 0 0 chr15 66018585 66018606 -37476368 + AT_rich Low_complexity Low_complexity 1 21 0 1 1088 3022 172 82 13 chr15 66018606 66019207 -37475767 - Lx4B LINE L1 -574 6484 5843 2 1088 1031 127 0 7 chr15 66019205 66019356 -37475618 + Lx4B LINE L1 6449 6598 -460 2 1088 231 140 0 0 chr15 66019487 66019537 -37475437 + (A)n Simple_repeat Simple_repeat 1 50 0 2 1088 2257 146 46 57 chr15 66019567 66020025 -37474949 + Lx4B LINE L1 6605 7057 -1 2 1088 222 267 140 96 chr15 66020041 66020062 -37474912 - B3A SINE B2 -11 187 2 2 1088 633 276 38 6 chr15 66020062 66020219 -37474755 - RSINE1 SINE B4 -1 164 3 2 1088 488 267 129 7 chr15 66021537 66021684 -37473290 + B3A SINE B2 1 165 -33 2 1088 1194 277 107 43 chr15 66021750 66022422 -37472552 - L1MC3 LINE L1 -15 7770 7056 2 1088 445 277 56 101 chr15 66022448 66022785 -37472189 + L1MD3 LINE L1 6722 7043 -952 2 1088 1294 249 58 44 chr15 66022827 66023192 -37471782 + ORR1D1 LTR MaLR 1 370 -4 2 1088 220 353 22 29 chr15 66024283 66024420 -37470554 - MIRb SINE MIR -39 229 94 2 1088 475 273 14 21 chr15 66025173 66025315 -37469659 + B1F1 SINE Alu 7 147 -2 2 1088 294 219 0 30 chr15 66026158 66026224 -37468750 - RSINE1 SINE B4 -83 82 19 3 1088 297 338 96 0 chr15 66026240 66026376 -37468598 + MTEb LTR MaLR 4 152 -227 3 1088 235 309 25 0 chr15 66026502 66026583 -37468391 - MLT1A1 LTR MaLR -47 361 279 3 1088 289 285 146 0 chr15 66026883 66027013 -37467961 - MIR SINE MIR -48 214 66 3 1088 667 314 52 75 chr15 66027658 66028044 -37466930 - Charlie1b DNA MER1_type -146 377 1 3 1088 362 337 80 0 chr15 66029459 66029634 -37465340 + B4A SINE B4 102 290 -2 3 1088 515 320 104 30 chr15 66029711 66030062 -37464912 + MLT2B1 LTR ERVL 1 377 -177 3 1088 1549 149 45 192 chr15 66030754 66031202 -37463772 + ORR1C2 LTR MaLR 1 382 -2 3 1088 241 373 70 16 chr15 66031409 66031537 -37463437 + MLT1L LTR MaLR 5 139 -471 3 1088 719 297 112 3 chr15 66031988 66032299 -37462675 - MER2 DNA MER2_type 0 345 1 3 1088 210 306 0 34 chr15 66032308 66032396 -37462578 - MIRb SINE MIR -52 216 132 4 1088 22 35 0 0 chr15 66032900 66032929 -37462045 + AT_rich Low_complexity Low_complexity 1 29 0 4 1088 267 289 13 0 chr15 66034177 66034253 -37460721 - L2a LINE L2 -3 3423 3347 4 1088 183 239 0 145 chr15 66034897 66034980 -37459994 + MIRc SINE MIR 94 164 -104 4 1088 203 289 59 24 chr15 66035898 66035983 -37458991 + L2c LINE L2 3092 3179 -208 4 1088 264 185 185 0 chr15 66036880 66036945 -37458029 - PB1 SINE Alu -8 119 43 4 1088 22 88 0 0 chr15 66036981 66037038 -37457936 + AT_rich Low_complexity Low_complexity 1 57 0 4 1088 283 197 26 26 chr15 66037409 66037487 -37457487 + B1_Mur2 SINE Alu 47 124 -25 4 1088 270 275 29 0 chr15 66037993 66038062 -37456912 + ID4 SINE ID 2 72 -11 4 1088 417 214 0 0 chr15 66038068 66038166 -37456808 + (CA)n Simple_repeat Simple_repeat 1 98 0 4 1088 868 242 43 5 chr15 66038632 66038840 -37456134 - B3 SINE B2 0 216 1 5 1088 789 281 134 51 chr15 66038976 66039767 -37455207 + L1M5 LINE L1 4940 5814 -359 5 1088 9840 48 0 1 chr15 66039874 66041753 -37453221 - L1Md_F2 LINE L1 -12 6570 4693 5 1088 378 296 17 17 chr15 66042564 66042681 -37452293 + B1F1 SINE Alu 13 129 -20 5 1088 1537 167 103 6 chr15 66043757 66044077 -37450897 - ORR1B2 LTR MaLR -15 352 2 5 1088 180 111 0 0 chr15 66044327 66044354 -37450620 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 5 1088 313 171 39 13 chr15 66044545 66044622 -37450352 - RMER5 LTR ERV1 -1 533 455 5 1088 401 0 20 0 chr15 66044761 66044810 -37450164 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1088 297 189 0 0 chr15 66045457 66045510 -37449464 - MTC-int LTR MaLR -816 442 390 5 1088 406 232 0 0 chr15 66045526 66045621 -37449353 - Lx6 LINE L1 -8 7452 7358 5 1088 1726 189 55 8 chr15 66045622 66046006 -37448968 - MTC-int LTR MaLR -856 402 1 5 1088 1664 190 91 89 chr15 66046006 66046422 -37448552 - MTC LTR MaLR 0 421 5 5 1088 2851 166 142 34 chr15 66046422 66047157 -37447817 + MTC-int LTR MaLR 445 1258 0 6 1088 1060 165 455 7 chr15 66047161 66047449 -37447525 + MTC LTR MaLR 5 421 0 6 1088 425 301 55 180 chr15 66047477 66047591 -37447383 + ID SINE ID 1 84 -140 6 1088 1076 111 31 62 chr15 66047591 66047784 -37447190 + B2_Mm2 SINE B2 1 187 -8 6 1088 425 301 55 180 chr15 66047784 66047924 -37447050 + ID_B1 SINE B4 85 223 -1 6 1088 2823 57 50 29 chr15 66047968 66048348 -37446626 + RLTR10 LTR ERVK 1 388 -2 6 1088 5477 55 121 112 chr15 66048359 66049301 -37445673 + RLTR10-int LTR ERVK 41 991 -996 6 1088 644 287 62 62 chr15 66049327 66049750 -37445224 + RLTR10-int LTR ERVK 1172 1594 -5987 6 1088 8699 31 2 2 chr15 66049832 66050829 -37444145 + RLTR10-int LTR ERVK 990 1986 -1 6 1088 2799 62 50 26 chr15 66050829 66051208 -37443766 + RLTR10 LTR ERVK 1 388 -2 6 1088 611 226 43 82 chr15 66051481 66051688 -37443286 - RCHARR1 DNA MER1_type -28 946 748 6 1088 1021 242 61 8 chr15 66051685 66051947 -37443027 - RCHARR1 DNA MER1_type -505 469 194 6 1088 594 336 103 0 chr15 66051979 66052211 -37442763 + B4A SINE B4 27 282 -10 6 1088 248 241 19 0 chr15 66053060 66053114 -37441860 + MLT1E3 LTR MaLR 93 147 -477 6 1088 345 24 0 0 chr15 66053292 66053334 -37441640 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1088 180 0 0 0 chr15 66053898 66053918 -37441056 + (TAA)n Simple_repeat Simple_repeat 1 20 0 6 1088 464 251 138 24 chr15 66057817 66058120 -37436854 + ORR1E LTR MaLR 7 352 -7 7 1088 681 13 0 0 chr15 66058132 66058210 -37436764 + (TTTC)n Simple_repeat Simple_repeat 3 80 0 7 1088 245 118 49 73 chr15 66058592 66058674 -37436300 + (TATAA)n Simple_repeat Simple_repeat 3 82 0 7 1088 589 281 53 36 chr15 66058697 66058978 -37435996 + L1MC2 LINE L1 6039 6324 -20 7 1088 203 194 0 0 chr15 66059638 66059674 -37435300 + (TA)n Simple_repeat Simple_repeat 2 37 0 7 1088 653 134 9 0 chr15 66059677 66059789 -37435185 + (TAGA)n Simple_repeat Simple_repeat 2 114 0 7 16 2242 273 113 27 chr15 66060206 66061186 -37433788 - Lx9 LINE L1 -691 6953 5761 7 1089 736 301 128 36 chr15 66061190 66061497 -37433477 + Lx9 LINE L1 7166 7480 -164 7 1089 423 0 0 0 chr15 66061497 66061544 -37433430 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1089 736 301 128 36 chr15 66061544 66061674 -37433300 + Lx9 LINE L1 7481 7643 -1 7 1089 1367 316 38 31 chr15 66061681 66061998 -37432976 + L1M2 LINE L1 3377 3696 -2447 7 1089 483 18 0 0 chr15 66061998 66062054 -37432920 + (CA)n Simple_repeat Simple_repeat 1 56 0 8 1089 1367 316 38 31 chr15 66062054 66062452 -37432522 + L1M2 LINE L1 3697 4097 -2046 7 1089 907 280 61 56 chr15 66063925 66064300 -37430674 - MTEb LTR MaLR -2 377 1 8 1089 22 88 0 0 chr15 66065223 66065280 -37429694 + AT_rich Low_complexity Low_complexity 1 57 0 8 1089 212 0 0 35 chr15 66065447 66065476 -37429498 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 8 1089 637 317 163 40 chr15 66065634 66066203 -37428771 + MLT1E1 LTR MaLR 6 644 -10 8 1089 384 22 0 0 chr15 66066386 66066431 -37428543 + (CAAAA)n Simple_repeat Simple_repeat 4 48 0 8 1089 986 294 44 20 chr15 66068795 66069163 -37425811 + MTE2b LTR MaLR 32 392 -27 8 1089 392 289 73 78 chr15 66069756 66069974 -37425000 + MTEa LTR MaLR 51 267 -112 8 1089 436 209 10 113 chr15 66069978 66070129 -37424845 + MTEa LTR MaLR 241 374 -5 8 1089 267 314 0 14 chr15 66070477 66070548 -37424426 + L2b LINE L2 3106 3175 -200 8 1089 22 56 0 0 chr15 66073234 66073270 -37421704 + AT_rich Low_complexity Low_complexity 1 36 0 8 1089 358 279 71 40 chr15 66073904 66074102 -37420872 - LTR33 LTR ERVL -56 459 256 9 1089 311 302 60 53 chr15 66077164 66077297 -37417677 + MLT1A LTR MaLR 3 136 -238 9 1089 744 309 29 63 chr15 66077484 66077842 -37417132 + ORR1E LTR MaLR 2 369 -10 9 1089 255 311 510 8 chr15 66077826 66078062 -37416912 - MLT1A1 LTR MaLR -51 357 3 9 1089 360 0 0 0 chr15 66078878 66078918 -37416056 + (TG)n Simple_repeat Simple_repeat 1 40 0 9 1089 733 318 34 70 chr15 66079413 66079711 -37415263 + MTE2a LTR MaLR 16 302 -77 9 1089 1594 157 89 44 chr15 66080467 66080827 -37414147 - RMER10B LTR ERVL -22 376 1 9 1089 298 333 25 17 chr15 66081770 66081889 -37413085 - MLT1C LTR MaLR -5 462 343 9 1089 543 280 15 29 chr15 66082473 66082542 -37412432 + B3 SINE B2 3 71 -145 9 1089 459 52 0 0 chr15 66082542 66082600 -37412374 + (CA)n Simple_repeat Simple_repeat 1 58 0 9 1089 543 222 39 95 chr15 66082600 66082691 -37412283 + B3 SINE B2 72 156 -39 9 1089 549 0 0 0 chr15 66082691 66082752 -37412222 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 1 1089 534 222 39 95 chr15 66082752 66082769 -37412205 + B2_Mm2 SINE B2 157 171 -24 9 1089 845 235 415 18 chr15 66083393 66083676 -37411298 - L1MA9 LINE L1 -308 5983 5600 1 1089 435 63 0 0 chr15 66083676 66083739 -37411235 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 1089 845 259 83 31 chr15 66083739 66083895 -37411079 - L1MA9 LINE L1 -692 5599 5425 1 1089 622 263 110 13 chr15 66084023 66084250 -37410724 - B4A SINE B4 -41 251 3 1 1089 379 230 102 0 chr15 66084250 66084366 -37410608 + L1MA7 LINE L1 6121 6258 -42 1 1089 198 270 15 31 chr15 66085059 66085124 -37409850 + MIRb SINE MIR 4 67 -201 1 1089 225 200 0 41 chr15 66085126 66085199 -37409775 + LTR53 LTR ERVL 10 79 -440 1 1089 259 273 148 76 chr15 66085253 66085503 -37409471 + LTR53 LTR ERVL 233 500 -19 1 1089 368 259 93 47 chr15 66086145 66086295 -37408679 + RLTR14 LTR ERV1 225 381 -1 1 1089 252 280 118 0 chr15 66086296 66086389 -37408585 + ORR1E LTR MaLR 8 111 -248 1 1089 228 247 117 0 chr15 66087177 66087254 -37407720 + L1M2a LINE L1 1028 1113 -6055 1 1089 201 211 0 0 chr15 66087905 66087957 -37407017 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1089 219 139 0 0 chr15 66088926 66088962 -37406012 + (TCCA)n Simple_repeat Simple_repeat 3 38 0 1 1089 366 298 25 34 chr15 66089333 66089451 -37405523 + RSINE1 SINE B4 14 130 -35 1 1089 348 24 0 0 chr15 66089492 66089533 -37405441 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1089 236 291 62 26 chr15 66089688 66089801 -37405173 + MIR3 SINE MIR 85 201 -7 1 1089 636 106 0 0 chr15 66090358 66090452 -37404522 + (TTCC)n Simple_repeat Simple_repeat 3 96 0 1 1089 590 332 53 14 chr15 66090546 66090754 -37404220 + MLT2B3 LTR ERVL 321 536 -18 1 1089 291 141 0 0 chr15 66090754 66090818 -37404156 + (T)n Simple_repeat Simple_repeat 1 64 0 1 1089 1084 109 0 0 chr15 66090821 66090968 -37404006 - B1_Mus1 SINE Alu 0 148 2 1 1089 930 216 58 5 chr15 66092068 66092273 -37402701 - B3 SINE B2 0 216 1 1 1089 2256 70 3 9 chr15 66092967 66093284 -37401690 + ORR1A2 LTR MaLR 5 319 -8 1 1089 1257 300 84 13 chr15 66093511 66094186 -37400788 - Zaphod DNA Tip100 -312 3719 2997 1 1089 295 284 22 11 chr15 66094241 66094330 -37400644 - B4 SINE B4 -90 202 113 1 1089 334 229 0 14 chr15 66094385 66094456 -37400518 - ID_B1 SINE B4 -78 146 77 1 1089 435 231 69 69 chr15 66096241 66096385 -37398589 + MLT1A1 LTR MaLR 265 408 0 1 1089 518 260 157 65 chr15 66096452 66096789 -37398185 + MLT1D LTR MaLR 133 500 -5 1 1089 827 296 3 109 chr15 66097487 66097809 -37397165 - B4A SINE B4 -4 288 1 1 1089 278 152 0 17 chr15 66098755 66098815 -37396159 + (TAA)n Simple_repeat Simple_repeat 2 60 0 1 1089 213 333 0 0 chr15 66099355 66099439 -37395535 - MIR SINE MIR -141 121 38 1 1089 342 0 0 0 chr15 66099439 66099477 -37395497 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1089 187 318 0 0 chr15 66099941 66100007 -37394967 - MIRm SINE MIR -122 154 89 1 1089 285 275 10 71 chr15 66101275 66101373 -37393601 - RMER15 LTR ERVL -113 462 371 1 1089 262 365 9 18 chr15 66102548 66102674 -37392300 + GA-rich Low_complexity Low_complexity 1 124 0 1 1089 254 194 15 0 chr15 66102677 66102744 -37392230 + G-rich Low_complexity Low_complexity 3 70 0 1 1089 1084 289 122 73 chr15 66105422 66106657 -37388317 - L1MC3 LINE L1 -53 7942 6414 1 1089 847 311 131 23 chr15 66106653 66107420 -37387554 - L1MC3 LINE L1 -1658 6127 5276 1 1089 324 0 0 0 chr15 66108713 66108749 -37386225 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1089 392 273 32 24 chr15 66108811 66108935 -37386039 - B4A SINE B4 -167 125 1 1 1089 491 261 9 0 chr15 66109086 66109201 -37385773 + RSINE1 SINE B4 16 131 -34 1 1089 297 0 0 0 chr15 66109207 66109240 -37385734 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1089 232 204 23 0 chr15 66109318 66109362 -37385612 - L1M4b LINE L1 -7284 50 6 1 1089 578 250 49 27 chr15 66110604 66110789 -37384185 - ORR1E LTR MaLR -164 195 7 1 1089 439 189 72 0 chr15 66111540 66111651 -37383323 - MTD LTR MaLR -1 418 300 1 1089 237 33 0 0 chr15 66111657 66111687 -37383287 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1 1089 628 325 64 22 chr15 66112465 66112765 -37382209 + MLT1A1 LTR MaLR 40 335 -30 1 1089 1349 232 76 0 chr15 66113068 66113425 -37381549 + Lx9 LINE L1 7259 7642 -2 1 1089 585 0 0 0 chr15 66114536 66114601 -37380373 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 1089 284 94 0 19 chr15 66117712 66117766 -37377208 + (CCG)n Simple_repeat Simple_repeat 2 54 0 1 1089 211 312 10 0 chr15 66118211 66118307 -37376667 + C-rich Low_complexity Low_complexity 3 99 0 1 1089 1233 118 241 7 chr15 66119548 66119822 -37375152 - ORR1A1 LTR MaLR -8 338 1 1 1089 426 352 68 54 chr15 66120841 66121195 -37373779 + ORR1E LTR MaLR 1 359 0 1 1089 720 275 184 37 chr15 66121536 66121857 -37373117 + MTD LTR MaLR 38 405 -14 1 1089 1084 275 31 44 chr15 66122665 66123026 -37371948 - ORR1D2 LTR MaLR -7 372 5 1 1089 602 312 46 0 chr15 66124336 66124509 -37370465 + ORR1E LTR MaLR 10 190 -169 1 1089 342 264 46 48 chr15 66124549 66124733 -37370241 + ORR1E LTR MaLR 197 375 -4 1 1089 369 176 0 0 chr15 66125668 66125742 -37369232 + (CCA)n Simple_repeat Simple_repeat 1 74 0 1 1089 396 366 17 38 chr15 66125744 66125980 -37368994 - MIRb SINE MIR -12 256 26 1 1089 230 307 88 0 chr15 66127092 66127206 -37367768 + MIRb SINE MIR 89 212 -56 1 1089 490 312 43 66 chr15 66127449 66127751 -37367223 - MLT1B LTR MaLR -3 387 93 1 1089 258 32 0 0 chr15 66127763 66127794 -37367180 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1089 442 292 7 40 chr15 66127806 66127956 -37367018 - RSINE1 SINE B4 -18 147 3 1 1089 289 306 9 18 chr15 66127957 66128067 -37366907 - MLT1B LTR MaLR -281 109 1 1 1089 425 90 15 0 chr15 66131062 66131129 -37363845 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 1089 223 324 133 13 chr15 66131141 66131291 -37363683 + MIRb SINE MIR 85 252 -16 1 1089 429 319 51 36 chr15 66132544 66132877 -37362097 - MLT1G LTR MaLR -8 587 206 1 1089 387 0 0 0 chr15 66134340 66134383 -37360591 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1089 387 0 0 0 chr15 66134383 66134425 -37360549 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 1089 21 36 0 0 chr15 66134978 66135006 -37359968 + AT_rich Low_complexity Low_complexity 1 28 0 1 1089 709 232 123 34 chr15 66135252 66135491 -37359483 - ORR1C2 LTR MaLR 0 384 88 1 1089 636 164 0 0 chr15 66135493 66135670 -37359304 + (CA)n Simple_repeat Simple_repeat 2 178 0 1 1089 749 177 23 103 chr15 66135696 66135910 -37359064 - ORR1C2 LTR MaLR -187 197 1 1 1089 797 261 70 62 chr15 66136475 66136847 -37358127 - MTEb LTR MaLR -4 375 1 1 1089 227 54 0 26 chr15 66137390 66137428 -37357546 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 1 1089 336 242 39 39 chr15 66137573 66137676 -37357298 + MLT1J LTR MaLR 161 263 -249 1 1089 201 74 0 0 chr15 66138613 66138640 -37356334 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1089 187 345 11 11 chr15 66138832 66138923 -37356051 - MIR SINE MIR -12 250 160 1 1089 208 247 157 17 chr15 66141069 66141180 -37353794 + MIRc SINE MIR 24 146 -130 1 1089 434 332 116 19 chr15 66141381 66141639 -37353335 + B4 SINE B4 8 290 -2 1 1089 244 185 15 30 chr15 66141704 66141771 -37353203 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 1089 2061 175 45 8 chr15 66141956 66142354 -37352620 - MTC LTR MaLR -8 413 1 1 1089 1221 254 32 38 chr15 66142359 66142703 -37352271 + MTEa LTR MaLR 35 376 -3 1 1089 405 0 0 0 chr15 66142896 66142941 -37352033 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1089 288 314 35 0 chr15 66143404 66143490 -37351484 - PB1D10 SINE Alu -26 91 3 1 1089 213 324 50 29 chr15 66144297 66144437 -37350537 - MIRb SINE MIR -50 218 76 1 1089 266 368 0 4 chr15 66144875 66144978 -37349996 - ID4_ SINE ID -50 102 2 1 1089 1114 118 78 10 chr15 66145182 66145387 -37349587 - URR1B DNA MER1_type 0 225 7 1 1089 336 333 73 77 chr15 66145737 66146216 -37348758 + MLT1J LTR MaLR 1 477 -35 1 1089 201 210 0 0 chr15 66146974 66147036 -37347938 + T-rich Low_complexity Low_complexity 1 62 0 1 1089 922 239 133 35 chr15 66148233 66148602 -37346372 - MTD LTR MaLR -14 405 1 1 1089 901 258 78 118 chr15 66149253 66149508 -37345466 + MTD LTR MaLR 53 269 -150 1 1089 4784 45 0 3 chr15 66149508 66150089 -37344885 - L1Md_F2 LINE L1 0 6582 6004 1 1089 901 258 78 118 chr15 66150089 66150215 -37344759 + MTD LTR MaLR 270 419 0 1 1089 396 117 0 0 chr15 66150296 66150373 -37344601 + (TCTG)n Simple_repeat Simple_repeat 2 78 0 1 1089 369 0 0 0 chr15 66150373 66150414 -37344560 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1089 348 316 159 77 chr15 66150729 66151055 -37343919 + MLT1C LTR MaLR 20 372 -18 1 1089 565 276 64 27 chr15 66151264 66151484 -37343490 - MLT1D LTR MaLR -258 247 20 1 1089 606 343 56 46 chr15 66151691 66152250 -37342724 + ERVL-E-int LTR ERVL 1335 2055 -3706 1 1089 263 287 83 47 chr15 66152873 66153088 -37341886 - MTEb LTR MaLR -1 378 132 1 1089 430 245 0 10 chr15 66153531 66153634 -37341340 - B4 SINE B4 -109 183 82 1 1089 214 137 4 69 chr15 66153791 66153856 -37341118 + MIRc SINE MIR 107 171 -105 1 1089 593 241 69 29 chr15 66154072 66154247 -37340727 - B3A SINE B2 -12 186 5 1 1089 266 0 0 29 chr15 66154380 66154415 -37340559 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1089 585 52 0 0 chr15 66156473 66156550 -37338424 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 1089 577 380 68 12 chr15 66156762 66157278 -37337696 + MER90a LTR ERV1 70 614 0 1 1089 275 347 0 8 chr15 66157756 66157875 -37337099 + MLT1L LTR MaLR 165 282 -328 1 1089 186 43 0 0 chr15 66158731 66158754 -37336220 + (TGG)n Simple_repeat Simple_repeat 2 24 0 2 1089 585 276 65 54 chr15 66159753 66160032 -37334942 - B4A SINE B4 -8 284 3 2 1089 369 332 116 39 chr15 66160155 66160490 -37334484 + MLT1A0 LTR MaLR 4 364 -1 2 1089 933 257 23 94 chr15 66160727 66160884 -37334090 + ORR1D1 LTR MaLR 20 184 -190 2 1089 438 69 0 0 chr15 66160884 66160942 -37334032 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1089 933 241 17 82 chr15 66160942 66161137 -37333837 + ORR1D1 LTR MaLR 185 374 0 2 1089 2056 205 40 0 chr15 66161464 66161869 -37333105 - MTC LTR MaLR 0 421 1 2 1089 8685 150 49 9 chr15 66161875 66161979 -37332995 + L1_Mur2 LINE L1 3989 4134 -1743 2 1089 2427 106 3 68 chr15 66161979 66162363 -37332611 - RLTR10D LTR ERVK 0 359 1 2 1089 8685 150 49 9 chr15 66162363 66163816 -37331158 + L1_Mur2 LINE L1 4135 5608 -269 2 1089 277 188 12 12 chr15 66163822 66163903 -37331071 + Lx5 LINE L1 6970 7050 0 2 1089 2381 191 69 72 chr15 66164765 66165374 -37329600 - RMER19C LTR ERVK -3 608 2 2 1089 494 335 87 69 chr15 66165377 66165755 -37329219 - MLT1J LTR MaLR -80 432 48 2 1089 189 196 0 0 chr15 66165798 66165849 -37329125 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1089 24 0 0 0 chr15 66165957 66165981 -37328993 + AT_rich Low_complexity Low_complexity 1 24 0 2 1089 296 196 247 0 chr15 66166297 66166394 -37328580 + RLTR40 LTR ERVK 1 121 -696 2 1089 383 254 8 56 chr15 66166398 66166523 -37328451 + PB1D9 SINE Alu 2 120 0 2 1089 2850 232 69 47 chr15 66166517 66167210 -37327764 + RLTR40 LTR ERVK 107 813 -4 2 1089 279 347 24 8 chr15 66167263 66167388 -37327586 + MIRb SINE MIR 129 255 -13 2 1089 299 329 128 60 chr15 66168981 66169263 -37325711 - LTR16A1 LTR ERVL -13 476 148 2 1089 459 216 82 7 chr15 66169599 66169734 -37325240 - Lx5 LINE L1 0 7050 6906 2 1089 290 422 0 25 chr15 66170035 66170154 -37324820 - PB1D10 SINE Alu -1 116 1 2 1089 922 97 20 7 chr15 66170577 66170723 -37324251 - L1_Mus3 LINE L1 -6 6632 6485 2 1089 226 213 33 0 chr15 66170956 66171017 -37323957 - MIR SINE MIR 0 262 200 2 1089 207 139 0 0 chr15 66171930 66171966 -37323008 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1089 317 363 0 8 chr15 66172006 66172131 -37322843 + (TG)n Simple_repeat Simple_repeat 2 125 0 2 1089 324 0 0 0 chr15 66172549 66172585 -37322389 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1089 342 61 0 0 chr15 66174246 66174295 -37320679 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1089 270 223 9 28 chr15 66174314 66174446 -37320528 + (TA)n Simple_repeat Simple_repeat 1 129 0 2 1089 482 31 16 0 chr15 66174446 66174510 -37320464 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 2 1089 270 223 9 28 chr15 66174510 66174516 -37320458 + (TA)n Simple_repeat Simple_repeat 1 6 0 2 1089 311 349 22 43 chr15 66174534 66174672 -37320302 - ORR1E LTR MaLR -210 149 15 2 1089 295 378 44 7 chr15 66176150 66176286 -37318688 + MLT1I LTR MaLR 47 187 -224 2 1089 414 169 0 0 chr15 66176959 66177024 -37317950 + polypurine Low_complexity Low_complexity 6 70 0 2 1089 688 184 5 32 chr15 66177028 66177213 -37317761 + G-rich Low_complexity Low_complexity 1 180 0 2 1089 265 197 14 14 chr15 66177212 66177284 -37317690 + A-rich Low_complexity Low_complexity 3 74 0 2 1089 590 284 70 80 chr15 66177375 66177676 -37317298 - B4A SINE B4 -3 289 3 2 1089 2672 93 19 16 chr15 66177691 66178062 -37316912 + L1Md_F2 LINE L1 6208 6579 -3 2 1089 266 188 78 36 chr15 66178150 66178316 -37316658 + (ATATG)n Simple_repeat Simple_repeat 2 174 0 2 1089 258 200 28 69 chr15 66178249 66178394 -37316580 + (TTATA)n Simple_repeat Simple_repeat 5 143 0 2 1089 21 57 0 0 chr15 66178433 66178468 -37316506 + AT_rich Low_complexity Low_complexity 1 35 0 2 1089 645 307 5 77 chr15 66179001 66179048 -37315926 - B3A SINE B2 -3 195 161 2 1089 495 0 0 0 chr15 66179048 66179103 -37315871 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1089 645 307 5 77 chr15 66179103 66179263 -37315711 - B3A SINE B2 -38 160 3 2 1089 345 346 214 11 chr15 66179615 66180144 -37314830 - L1MEg LINE L1 -4902 1182 547 2 1089 343 359 65 42 chr15 66180168 66180383 -37314591 + L1MEc LINE L1 177 396 -6004 2 1089 2254 190 65 15 chr15 66180412 66180824 -37314150 - Lx5 LINE L1 0 7050 6618 2 1089 2093 177 21 8 chr15 66181116 66181503 -37313471 - Lx LINE L1 0 6654 6263 2 1089 3748 47 14 5 chr15 66181695 66182141 -37312833 + L1Md_F2 LINE L1 6131 6580 -2 2 1089 843 271 37 87 chr15 66182600 66182899 -37312075 - B4 SINE B4 -1 291 8 2 1089 1255 236 82 3 chr15 66183244 66183538 -37311436 - Lx9 LINE L1 -703 6941 6625 2 1089 1391 272 65 7 chr15 66183537 66183970 -37311004 + Lx9 LINE L1 7187 7644 0 2 1089 3573 236 94 9 chr15 66184042 66184224 -37310750 - Lx9 LINE L1 -7 7637 7442 2 1089 195 129 0 0 chr15 66184224 66184255 -37310719 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 1089 246 62 0 0 chr15 66184258 66184290 -37310684 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1089 3573 236 94 9 chr15 66184290 66185058 -37309916 - Lx9 LINE L1 -203 7441 6609 2 1089 1216 82 0 0 chr15 66185069 66185216 -37309758 - B1_Mus2 SINE Alu 0 147 1 2 1089 827 88 16 0 chr15 66186100 66186225 -37308749 + (GGGA)n Simple_repeat Simple_repeat 4 130 0 2 1089 741 85 0 0 chr15 66186481 66186587 -37308387 + (TC)n Simple_repeat Simple_repeat 1 106 0 2 1089 235 342 42 30 chr15 66186671 66186837 -37308137 + L2a LINE L2 3198 3365 -61 2 1089 1787 159 24 80 chr15 66187521 66187817 -37307157 + ORR1B1 LTR MaLR 41 342 -52 2 1089 6087 126 63 13 chr15 66187817 66188731 -37306243 + Lx3B LINE L1 6013 6972 -1 2 1089 1787 159 24 80 chr15 66188731 66188809 -37306165 + ORR1B1 LTR MaLR 343 394 0 2 1089 2599 20 0 0 chr15 66189208 66189502 -37305472 - L1Md_F3 LINE L1 -264 6320 6027 2 1089 2550 21 3 14 chr15 66189502 66189798 -37305176 + L1Md_F3 LINE L1 6291 6583 -1 2 1089 249 254 0 0 chr15 66190412 66190467 -37304507 + (CACCAT)n Simple_repeat Simple_repeat 5 59 0 2 1089 392 181 62 13 chr15 66190467 66190579 -37304395 - ORR1E LTR MaLR 0 374 265 2 1089 191 114 29 0 chr15 66191032 66191067 -37303907 + (GA)n Simple_repeat Simple_repeat 2 37 0 2 1089 210 151 37 19 chr15 66191090 66191144 -37303830 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 2 136 791 93 8 0 chr15 66191243 66191361 -37303613 + (GGAA)n Simple_repeat Simple_repeat 2 120 0 2 1090 686 117 0 9 chr15 66191948 66192060 -37302914 + (TTTC)n Simple_repeat Simple_repeat 1 111 0 2 1090 2891 206 19 25 chr15 66192690 66192878 -37302096 - RMER1B Other Other -11 1055 864 2 1090 1198 95 77 0 chr15 66192878 66193046 -37301928 - B2_Mm2 SINE B2 -14 181 1 2 1090 2891 236 39 26 chr15 66193046 66193663 -37301311 - RMER1B Other Other -203 863 56 2 1090 1483 280 69 14 chr15 66193885 66194320 -37300654 + Lx8 LINE L1 6830 7288 -185 2 1090 2126 309 50 59 chr15 66194456 66195801 -37299173 + L1MA4 LINE L1 2970 4327 -1816 2 1090 448 305 75 50 chr15 66195801 66195960 -37299014 + RSINE1 SINE B4 3 165 0 2 1090 2126 309 50 59 chr15 66195960 66196007 -37298967 + L1MA4 LINE L1 4328 4372 -1771 2 1090 851 75 0 8 chr15 66196007 66196128 -37298846 + (TATATG)n Simple_repeat Simple_repeat 5 124 0 2 1090 2126 309 50 59 chr15 66196128 66196396 -37298578 + L1MA4 LINE L1 4373 4615 -1528 2 1090 243 0 0 0 chr15 66196396 66196423 -37298551 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1090 2126 225 208 42 chr15 66196423 66196579 -37298395 + L1MA4 LINE L1 4573 4745 -1102 2 1090 995 286 61 41 chr15 66196565 66197071 -37297903 + L1MA4 LINE L1 5416 5898 -393 2 1090 188 256 0 131 chr15 66197409 66197508 -37297466 + MIRm SINE MIR 24 109 -167 2 1090 562 294 113 49 chr15 66198318 66198437 -37296537 - B4A SINE B4 -75 217 82 2 1090 361 0 61 30 chr15 66198437 66198503 -37296471 + (TTG)n Simple_repeat Simple_repeat 2 69 0 2 1090 562 294 113 49 chr15 66198503 66198587 -37296387 - B4A SINE B4 -211 81 1 2 1090 578 265 0 29 chr15 66200364 66200500 -37294474 + B3A SINE B2 3 134 -64 2 1090 225 65 0 0 chr15 66200541 66200572 -37294402 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1090 1214 43 0 7 chr15 66200572 66200711 -37294263 - B1_Mm SINE Alu -9 138 1 2 1090 655 257 145 21 chr15 66200932 66201174 -37293800 - MER68 LTR ERVL -283 280 9 2 1090 2511 34 0 0 chr15 66201596 66201887 -37293087 - L1Md_F2 LINE L1 -652 5930 5640 2 1090 4985 63 2 5 chr15 66201884 66202603 -37292371 + L1Md_F2 LINE L1 5937 6582 0 2 1090 597 284 30 55 chr15 66202735 66202936 -37292038 + B3A SINE B2 1 196 -2 2 1090 351 328 116 16 chr15 66203840 66204029 -37290945 + MLT1G3 LTR MaLR 14 221 -374 2 1090 463 289 151 54 chr15 66205859 66206064 -37288910 + ORR1D2 LTR MaLR 146 370 0 2 1090 1112 339 49 35 chr15 66206072 66206766 -37288208 + ERVL-E-int LTR ERVL 4232 4935 -732 2 1090 230 299 86 86 chr15 66207130 66207350 -37287624 + LTR33C LTR ERVL 410 629 0 2 1090 550 134 23 16 chr15 66207878 66208007 -37286967 + (TATG)n Simple_repeat Simple_repeat 3 132 0 2 1090 896 241 77 104 chr15 66208010 66208452 -37286522 - MT2B LTR ERVL -40 561 1 2 1090 1143 269 126 8 chr15 66208953 66209309 -37285665 + MTD LTR MaLR 22 419 0 2 1090 1115 255 182 90 chr15 66209309 66210345 -37284629 + MTD-int LTR MaLR 1 1249 -9 2 1090 959 284 82 101 chr15 66210358 66210746 -37284228 + MTD LTR MaLR 5 385 -34 2 1090 837 224 132 16 chr15 66211022 66211271 -37283703 - ORR1D2 LTR MaLR -8 362 85 2 1090 240 418 48 0 chr15 66211354 66211519 -37283455 - MIRb SINE MIR -88 180 8 2 1090 29216 131 21 52 chr15 66213780 66216131 -37278843 + L1VL4 LINE L1 244 2519 -3364 2 1090 914 93 132 0 chr15 66216131 66216260 -37278714 + B1_Mus2 SINE Alu 1 146 -1 2 1090 29216 100 14 30 chr15 66216260 66217203 -37277771 + L1VL4 LINE L1 2520 3476 -2407 2 1090 189 0 0 0 chr15 66217203 66217224 -37277750 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2 1090 29216 100 14 30 chr15 66217224 66219361 -37275613 + L1VL4 LINE L1 3477 5611 -272 2 1090 1139 147 58 0 chr15 66219361 66219552 -37275422 + L1_Mus2 LINE L1 6365 6566 0 2 1090 198 0 0 0 chr15 66219553 66219575 -37275399 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 2 1090 261 293 141 15 chr15 66219584 66219719 -37275255 + MER68 LTR ERVL 387 538 -25 2 1090 606 151 0 0 chr15 66220527 66220633 -37274341 + (TA)n Simple_repeat Simple_repeat 2 107 0 2 1090 313 299 29 0 chr15 66220768 66220905 -37274069 - L1MA4 LINE L1 -387 5913 5773 2 1090 3476 176 35 0 chr15 66220984 66221580 -37273394 + MERVL_2A-int LTR ERVL 2774 3390 -2371 2 1090 261 264 0 0 chr15 66221811 66221864 -37273110 - MER70A LTR ERVL 0 472 420 2 1090 378 0 0 0 chr15 66221865 66221907 -37273067 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1090 424 280 49 103 chr15 66222225 66222412 -37272562 - ORR1E LTR MaLR -129 230 51 3 1090 467 305 53 34 chr15 66222412 66222619 -37272355 + B3 SINE B2 1 211 -5 3 1090 424 280 49 103 chr15 66222619 66222674 -37272300 - ORR1E LTR MaLR -309 50 1 3 1090 449 224 1 15 chr15 66222674 66222768 -37272206 - ORR1E-int LTR MaLR -53 1527 1448 3 1090 797 280 61 24 chr15 66222924 66223170 -37271804 - MTE-int LTR MaLR -110 1470 1215 3 1090 221 0 35 0 chr15 66223170 66223199 -37271775 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1090 1025 110 0 33 chr15 66223199 66223350 -37271624 - B1_Mus1 SINE Alu -1 147 2 3 1090 797 280 61 24 chr15 66223350 66223398 -37271576 - MTE-int LTR MaLR -366 1214 1165 3 1090 370 333 36 29 chr15 66223441 66223580 -37271394 - MTE-int LTR MaLR -551 1029 890 3 1090 315 310 143 6 chr15 66223819 66223994 -37270980 + RMER20B LTR ERVK 192 390 -237 3 1090 259 317 37 0 chr15 66224177 66224258 -37270716 - MTE-int LTR MaLR -1229 351 268 3 1090 1124 243 121 44 chr15 66224258 66224598 -37270376 + MTE2b LTR MaLR 3 368 -11 3 1090 694 265 102 9 chr15 66224600 66224825 -37270149 - MTE-int LTR MaLR -1300 280 35 3 1090 386 349 92 79 chr15 66224834 66225126 -37269848 - ORR1E LTR MaLR -11 348 53 3 1090 258 304 72 0 chr15 66226069 66226194 -37268780 + L1M5 LINE L1 4620 4753 -1393 3 1090 199 305 122 31 chr15 66226459 66226557 -37268417 + MIRm SINE MIR 18 124 -152 3 1090 183 42 0 0 chr15 66228685 66228709 -37266265 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1090 193 306 45 45 chr15 66229073 66229162 -37265812 + MIR3 SINE MIR 115 203 -5 3 1090 401 302 38 70 chr15 66229878 66230063 -37264911 + LTR16A LTR ERVL 260 438 -13 3 1090 2879 193 17 18 chr15 66231371 66232074 -37262900 - RLTR40 LTR ERVK -10 807 2 3 1090 6367 198 45 9 chr15 66232823 66234404 -37260570 + Lx5 LINE L1 5388 7028 -22 3 1090 246 62 0 0 chr15 66234404 66234436 -37260538 + (TTAA)n Simple_repeat Simple_repeat 2 33 0 3 1090 185 65 0 31 chr15 66234776 66234808 -37260166 + (TGG)n Simple_repeat Simple_repeat 1 31 0 3 1090 366 23 0 0 chr15 66234821 66234864 -37260110 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1090 235 250 54 0 chr15 66234864 66234920 -37260054 - tRNA-Ala-GCY_ tRNA tRNA -8 67 9 3 1090 328 326 177 19 chr15 66235043 66235386 -37259588 - L1MC LINE L1 -306 5818 5426 3 1090 265 268 0 27 chr15 66235744 66235817 -37259157 + L2a LINE L2 3271 3341 -85 3 1090 609 269 39 37 chr15 66236084 66236283 -37258691 + B3A SINE B2 9 203 -13 3 1090 213 204 0 0 chr15 66237459 66237503 -37257471 + (CAGA)n Simple_repeat Simple_repeat 3 46 0 3 1090 1021 260 171 29 chr15 66237893 66238349 -37256625 + Lx8 LINE L1 6935 7455 -18 3 1090 234 139 181 0 chr15 66238342 66238414 -37256560 + Lx9 LINE L1 7559 7643 -1 3 1090 494 228 83 107 chr15 66238916 66239132 -37255842 + MTE2a LTR MaLR 125 335 -44 3 1090 367 234 10 41 chr15 66239130 66239228 -37255746 - MTE2a LTR MaLR -280 99 5 3 1090 254 183 46 77 chr15 66239487 66239552 -37255422 + MTE2a LTR MaLR 316 378 -1 3 1090 183 80 0 0 chr15 66240148 66240173 -37254801 + (GGAGA)n Simple_repeat Simple_repeat 1 25 0 3 1090 560 92 0 10 chr15 66240466 66240565 -37254409 + L1_Mus3 LINE L1 6533 6630 -8 3 1090 1196 302 2 108 chr15 66241487 66241903 -37253071 - MTEb LTR MaLR -5 374 3 3 1090 188 284 133 29 chr15 66242620 66242725 -37252249 + L2a LINE L2 3306 3421 -5 3 1090 378 0 0 0 chr15 66243652 66243694 -37251280 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1090 26 64 0 0 chr15 66244084 66244131 -37250843 + AT_rich Low_complexity Low_complexity 1 47 0 3 1090 26 64 0 0 chr15 66244204 66244251 -37250723 + AT_rich Low_complexity Low_complexity 1 47 0 3 1090 200 248 29 38 chr15 66244527 66244632 -37250342 + A-rich Low_complexity Low_complexity 2 105 0 3 1090 1438 264 42 20 chr15 66244683 66245177 -37249797 - Lx7 LINE L1 -378 7318 6814 3 1090 397 349 42 59 chr15 66245849 66246138 -37248836 - L2a LINE L2 -2 3424 3141 3 1090 323 320 29 59 chr15 66246193 66246329 -37248645 - MTEa LTR MaLR 0 379 248 3 1090 262 297 32 32 chr15 66247792 66247886 -37247088 - MLT1A0 LTR MaLR -9 399 306 3 1090 362 261 60 30 chr15 66248011 66248145 -37246829 - MLT1A0 LTR MaLR -222 143 6 3 1090 831 222 137 88 chr15 66248765 66249116 -37245858 + RLTR9A LTR ERVK 1 368 0 3 1090 204 40 0 0 chr15 66249429 66249454 -37245520 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 3 1090 445 174 92 17 chr15 66249502 66249608 -37245366 + ETnERV2-int LTR ERVK 311 397 -5009 3 1090 3602 84 30 2 chr15 66249610 66250111 -37244863 + LTRIS2 LTR ERV1 50 564 0 3 1090 3688 154 92 94 chr15 66250146 66250942 -37244032 + ETnERV2-int LTR ERVK 1158 2003 -5403 3 1090 232 277 46 0 chr15 66250942 66251007 -37243967 + MTC-int LTR MaLR 484 551 -707 3 1090 3688 154 92 94 chr15 66251007 66251180 -37243794 + ETnERV2-int LTR ERVK 2004 2189 -5217 3 1090 5448 183 46 50 chr15 66251262 66253035 -37241939 + ETnERV2-int LTR ERVK 1415 3826 -1982 3 1090 247 150 112 0 chr15 66253035 66253115 -37241859 + (CATAT)n Simple_repeat Simple_repeat 2 90 0 3 1090 3979 173 20 39 chr15 66253136 66253977 -37240997 + ETnERV2-int LTR ERVK 5387 6211 -1195 3 1090 273 188 46 23 chr15 66254123 66254210 -37240764 + ETnERV2-int LTR ERVK 6336 6424 -982 3 1090 823 202 147 89 chr15 66254476 66254824 -37240150 + RLTR9A LTR ERVK 1 368 0 3 1090 1148 75 0 0 chr15 66255981 66256128 -37238846 - B1_Mm SINE Alu 0 147 1 3 1090 193 200 0 68 chr15 66256150 66256209 -37238765 - L3 LINE CR1 -4285 204 150 3 1090 360 319 16 25 chr15 66256775 66256897 -37238077 - Tigger5 DNA MER2_type -3 2403 2283 3 1090 26 30 0 0 chr15 66256966 66256999 -37237975 + AT_rich Low_complexity Low_complexity 1 33 0 3 1090 1388 238 71 24 chr15 66257606 66258204 -37236770 + Lx7 LINE L1 5435 6100 -1596 3 1090 1562 157 99 3 chr15 66258213 66258507 -37236467 + RLTR24 LTR ERV1 131 452 -77 3 1090 21 36 0 0 chr15 66258507 66258535 -37236439 + AT_rich Low_complexity Low_complexity 1 28 0 3 1090 23 33 0 0 chr15 66258561 66258591 -37236383 + AT_rich Low_complexity Low_complexity 1 30 0 3 1090 1119 330 107 16 chr15 66258697 66259768 -37235206 + Lx7 LINE L1 6301 7468 -5 3 1090 1015 294 74 41 chr15 66259775 66260165 -37234809 - MTD LTR MaLR -14 405 3 3 1090 2032 164 56 8 chr15 66261833 66262209 -37232765 + ORR1B1 LTR MaLR 1 394 0 3 1090 401 358 56 43 chr15 66262301 66262532 -37232442 - MIR SINE MIR -28 234 1 3 1090 270 0 0 0 chr15 66262705 66262735 -37232239 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 1090 452 280 30 8 chr15 66263459 66263592 -37231382 + B1F1 SINE Alu 3 138 -11 3 1090 21 0 0 0 chr15 66264032 66264053 -37230921 + AT_rich Low_complexity Low_complexity 1 21 0 3 1090 227 310 11 22 chr15 66264054 66264143 -37230831 + MLT1L LTR MaLR 518 605 -5 3 1090 401 150 73 12 chr15 66264412 66264523 -37230451 - L1MA7 LINE L1 -345 5967 5848 3 1090 232 293 112 68 chr15 66264957 66265118 -37229856 + MTB_Mm LTR MaLR 95 262 -145 3 1090 678 292 0 0 chr15 66267055 66267202 -37227772 + B3A SINE B2 1 147 -51 3 1090 330 26 0 0 chr15 66267207 66267246 -37227728 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1090 1340 158 288 3 chr15 66267556 66267855 -37227119 - ORR1C2 LTR MaLR 0 384 1 3 1090 211 278 88 15 chr15 66270655 66270781 -37224193 + MIRb SINE MIR 35 166 -102 3 1090 232 113 18 54 chr15 66271448 66271504 -37223470 + A-rich Low_complexity Low_complexity 1 54 0 3 1090 606 307 116 12 chr15 66271681 66272096 -37222878 + L1MB4 LINE L1 5721 6178 -2 3 1090 321 343 57 6 chr15 66272671 66272847 -37222127 - L2 LINE L2 -2669 750 566 3 1090 949 109 19 0 chr15 66272992 66273148 -37221826 - L1_Mus3 LINE L1 -4 6634 6476 3 1090 754 262 33 24 chr15 66273362 66273573 -37221401 + B3 SINE B2 1 213 -3 3 1090 3860 62 20 4 chr15 66274316 66274817 -37220157 - L1Md_F2 LINE L1 0 6582 6074 3 1090 189 378 40 30 chr15 66275146 66275247 -37219727 + L2 LINE L2 2979 3080 -339 3 1090 323 293 118 31 chr15 66275316 66275443 -37219531 + MLT1J LTR MaLR 1 138 -374 3 1090 22 0 0 0 chr15 66275469 66275491 -37219483 + AT_rich Low_complexity Low_complexity 1 22 0 3 1090 188 340 129 17 chr15 66275531 66275818 -37219156 - L2 LINE L2 -638 2781 2463 3 1090 236 100 25 0 chr15 66276040 66276080 -37218894 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 1090 688 251 0 17 chr15 66276129 66276307 -37218667 - Lx7 LINE L1 -384 7312 7138 3 1090 325 360 165 24 chr15 66276567 66277162 -37217812 - L2 LINE L2 -1469 1950 1272 3 1090 872 8 34 0 chr15 66278608 66278725 -37216249 + (TC)n Simple_repeat Simple_repeat 2 122 0 3 1090 217 317 17 0 chr15 66279922 66279982 -37214992 - ID4 SINE ID -6 77 17 3 1090 1155 230 26 46 chr15 66280375 66280412 -37214562 + RLTR11A LTR ERVK 226 259 -269 3 1090 423 0 0 0 chr15 66280412 66280459 -37214515 + (GGAA)n Simple_repeat Simple_repeat 1 47 0 3 1090 1155 230 26 46 chr15 66280459 66280726 -37214248 + RLTR11A LTR ERVK 260 523 -5 3 1090 1844 250 32 89 chr15 66282506 66283138 -37211836 + Lx7 LINE L1 6721 7316 -380 3 1090 885 162 0 0 chr15 66283165 66283462 -37211512 + (TG)n Simple_repeat Simple_repeat 1 297 0 3 1090 271 256 73 24 chr15 66283503 66283627 -37211347 + Lx7 LINE L1 7566 7695 -1 3 1090 26 30 0 0 chr15 66283627 66283660 -37211314 + AT_rich Low_complexity Low_complexity 1 33 0 3 1090 344 192 192 0 chr15 66284735 66284813 -37210161 - PB1D9 SINE Alu -26 94 2 3 1090 234 0 0 0 chr15 66285407 66285433 -37209541 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1090 364 279 0 0 chr15 66285896 66285975 -37208999 + B1F SINE Alu 1 79 -70 3 1090 734 260 98 5 chr15 66286469 66286674 -37208300 + B4A SINE B4 1 224 -68 3 1090 31284 79 8 65 chr15 66286681 66287982 -37206992 + L1Md_F2 LINE L1 392 1690 -4193 3 1090 1751 139 71 26 chr15 66287982 66288292 -37206682 + MTB_Mm LTR MaLR 29 352 -55 3 1090 31284 79 8 65 chr15 66288292 66292190 -37202784 + L1Md_F2 LINE L1 1691 5586 -297 3 1090 8103 69 4 5 chr15 66292191 66293185 -37201789 + L1Md_F2 LINE L1 5588 6580 -2 3 1090 614 245 148 110 chr15 66293475 66293902 -37201072 + MLT1D LTR MaLR 57 499 -6 3 1090 287 233 0 16 chr15 66294040 66294101 -37200873 - L4 LINE RTE -204 1825 1766 3 1090 282 29 0 0 chr15 66294270 66294305 -37200669 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1090 22 0 0 0 chr15 66294468 66294490 -37200484 + AT_rich Low_complexity Low_complexity 1 22 0 3 1090 649 323 64 76 chr15 66295348 66295783 -37199191 + MLT1C LTR MaLR 38 467 0 3 1090 213 39 0 0 chr15 66295976 66296002 -37198972 + (CAG)n Simple_repeat Simple_repeat 2 27 0 3 1090 450 0 0 0 chr15 66296002 66296051 -37198923 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1090 789 315 54 23 chr15 66296983 66297243 -37197731 + B4 SINE B4 2 269 -23 4 1090 408 40 0 0 chr15 66297245 66297295 -37197679 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1090 13218 49 7 0 chr15 66297599 66299211 -37195763 + L1Md_F3 LINE L1 3963 5586 -297 4 1090 8557 53 0 1 chr15 66299211 66300208 -37194766 + L1Md_F3 LINE L1 5587 6582 -2 4 1090 493 280 123 75 chr15 66300227 66300455 -37194519 + MER21B LTR ERV1 493 731 -132 4 1090 1014 157 0 0 chr15 66300580 66300758 -37194216 + (CAGAA)n Simple_repeat Simple_repeat 1 178 0 4 1090 231 36 0 0 chr15 66300760 66300788 -37194186 + (CAGGA)n Simple_repeat Simple_repeat 1 28 0 4 1090 287 247 63 63 chr15 66300811 66300906 -37194068 + MER5A DNA MER1_type 40 134 -55 4 1090 360 244 73 66 chr15 66300932 66301068 -37193906 - B1F1 SINE Alu 0 149 13 4 1090 300 298 57 24 chr15 66302377 66302501 -37192473 + L1MC4 LINE L1 6879 7006 -1036 4 1090 412 344 15 30 chr15 66303320 66303452 -37191522 + B4 SINE B4 40 169 -123 4 1090 795 162 0 0 chr15 66303501 66303643 -37191331 + G-rich Low_complexity Low_complexity 4 145 0 4 1090 306 0 0 0 chr15 66303731 66303765 -37191209 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1090 778 316 38 76 chr15 66304205 66304469 -37190505 + B4A SINE B4 37 290 -2 4 1090 236 297 55 78 chr15 66304650 66304778 -37190196 + MLT1G1 LTR MaLR 68 192 -387 4 1090 285 197 30 0 chr15 66304798 66304864 -37190110 + L1MA5 LINE L1 6221 6288 -12 4 1090 190 359 0 23 chr15 66305087 66305199 -37189775 - MIRb SINE MIR -72 136 36 4 1090 288 236 0 0 chr15 66305259 66305348 -37189626 + (CAT)n Simple_repeat Simple_repeat 2 90 0 4 1090 776 317 117 40 chr15 66306164 66306660 -37188314 + RMER5 LTR ERV1 1 534 0 4 1090 237 132 0 0 chr15 66307194 66307232 -37187742 + (TCC)n Simple_repeat Simple_repeat 2 39 0 4 1090 240 184 0 0 chr15 66307379 66307428 -37187546 + A-rich Low_complexity Low_complexity 1 49 0 4 1090 3525 179 94 89 chr15 66309963 66310398 -37184576 + Lx3C LINE L1 6063 6534 -442 4 1090 298 152 14 57 chr15 66310398 66310468 -37184506 + RLTR22_Mur LTR ERVK 1 67 -1781 4 1090 3525 179 94 89 chr15 66310468 66310869 -37184105 + Lx3C LINE L1 6535 6972 -4 4 1090 22 56 0 0 chr15 66310871 66310907 -37184067 + AT_rich Low_complexity Low_complexity 1 36 0 4 1090 349 239 15 0 chr15 66310907 66310974 -37184000 - B4A SINE B4 -213 79 12 4 1090 617 298 142 34 chr15 66310983 66311393 -37183581 + L1MB7 LINE L1 5712 6165 -19 4 1090 235 167 71 82 chr15 66311648 66311733 -37183241 + L1MD LINE L1 5220 5303 -843 4 1090 294 232 103 58 chr15 66312260 66312347 -37182627 + RSINE1 SINE B4 37 127 -38 4 1090 488 167 16 16 chr15 66312354 66312476 -37182498 + CT-rich Low_complexity Low_complexity 1 122 0 4 1090 2116 204 14 19 chr15 66312998 66313418 -37181556 - MTD LTR MaLR -1 418 1 4 1090 804 253 6 0 chr15 66314134 66314292 -37180682 - RSINE1 SINE B4 -2 163 5 4 1090 405 0 0 0 chr15 66314292 66314337 -37180637 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1090 3726 20 2 0 chr15 66314478 66314873 -37180101 - MTA_Mm LTR MaLR 0 396 1 4 1090 9790 34 2 1 chr15 66314873 66315970 -37179004 - MTA_Mm-int LTR MaLR 0 1098 1 4 1090 3726 20 2 0 chr15 66315970 66316365 -37178609 - MTA_Mm LTR MaLR 0 396 1 4 1090 410 66 0 32 chr15 66316546 66316609 -37178365 + (TTTTC)n Simple_repeat Simple_repeat 3 63 0 4 1090 1145 95 0 0 chr15 66316609 66316756 -37178218 - B1_Mus1 SINE Alu 0 148 2 4 1090 268 224 0 17 chr15 66318020 66318079 -37176895 - MER20 DNA MER1_type 0 219 162 4 1090 516 32 0 0 chr15 66318134 66318196 -37176778 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 1090 290 371 50 38 chr15 66318440 66318678 -37176296 - MIRb SINE MIR -8 260 20 4 1090 402 21 0 0 chr15 66318862 66318909 -37176065 + (TTCC)n Simple_repeat Simple_repeat 1 47 0 4 1090 1197 186 80 186 chr15 66319097 66319297 -37175677 + ORR1D1 LTR MaLR 1 155 -219 4 1090 1411 173 21 0 chr15 66319297 66319540 -37175434 + Lx LINE L1 6393 6640 -14 4 1090 1197 186 80 186 chr15 66319540 66319754 -37175220 + ORR1D1 LTR MaLR 156 371 -3 4 1090 246 335 40 58 chr15 66319943 66320117 -37174857 - L1MC1 LINE L1 -16 6317 6147 4 1090 891 132 198 0 chr15 66320133 66320315 -37174659 - URR1B DNA MER1_type 0 225 8 4 1090 633 281 130 0 chr15 66320372 66320642 -37174332 - L1MC1 LINE L1 -308 6025 5721 4 1090 190 256 0 0 chr15 66322029 66322072 -37172902 - MIR SINE MIR -27 235 193 4 1091 600 100 190 0 chr15 66322883 66322995 -37171979 - RLTR11A LTR ERVK -59 468 322 4 1091 1396 164 14 47 chr15 66322984 66323259 -37171715 + RLTR15 LTR ERVK 94 359 0 4 1091 369 0 0 0 chr15 66324129 66324170 -37170804 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1091 297 387 80 45 chr15 66324594 66324794 -37170180 + MER115 DNA Tip100 102 308 -385 4 1091 434 320 113 34 chr15 66324820 66325059 -37169915 + MER115 DNA Tip100 348 605 -88 4 1091 243 207 68 11 chr15 66325768 66325856 -37169118 - Lx8 LINE L1 -11 7462 7370 4 1091 637 238 71 35 chr15 66325973 66326143 -37168831 + Lx8 LINE L1 6964 7139 -334 4 1091 643 150 27 27 chr15 66326571 66326681 -37168293 - B1_Mur3 SINE Alu 0 149 40 4 1091 228 275 12 48 chr15 66326610 66326694 -37168280 - RLTR25B LTR ERVK -520 508 428 4 1091 381 159 0 0 chr15 66326738 66326814 -37168160 - PB1D9 SINE Alu -40 77 2 4 1091 398 324 116 67 chr15 66327305 66327573 -37167401 + B4A SINE B4 12 292 0 4 1091 314 156 0 15 chr15 66327574 66327639 -37167335 + (CA)n Simple_repeat Simple_repeat 2 65 0 4 1091 303 268 10 87 chr15 66327792 66327926 -37167048 - B1F SINE Alu -1 119 2 4 1091 207 217 22 0 chr15 66328056 66328102 -37166872 + (CATATA)n Simple_repeat Simple_repeat 6 52 0 4 1091 269 305 83 10 chr15 66328356 66328452 -37166522 - L2b LINE L2 -213 3162 3060 4 1091 516 334 203 23 chr15 66328492 66328841 -37166133 + LTR16A LTR ERVL 33 444 -7 4 1091 271 220 0 35 chr15 66329374 66329459 -37165515 + (TTATA)n Simple_repeat Simple_repeat 3 84 0 4 1091 293 271 130 42 chr15 66329517 66329841 -37165133 + L1MC LINE L1 2972 3335 -2811 4 1091 217 191 21 0 chr15 66329841 66329888 -37165086 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1091 269 276 84 19 chr15 66330048 66330155 -37164819 + L1M3 LINE L1 3492 3605 -2535 4 1091 1613 246 66 24 chr15 66330195 66330592 -37164382 - MTD LTR MaLR -14 405 1 4 1091 519 17 0 0 chr15 66330747 66330807 -37164167 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 1091 219 167 0 0 chr15 66331080 66331122 -37163852 + CT-rich Low_complexity Low_complexity 2 43 0 4 1091 717 302 141 40 chr15 66331220 66331468 -37163506 + B4A SINE B4 10 282 -10 4 1091 195 100 0 0 chr15 66331496 66331526 -37163448 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1091 195 309 90 75 chr15 66331718 66331851 -37163123 - MIRb SINE MIR -127 141 7 4 1091 372 272 61 42 chr15 66334254 66334273 -37160701 + CYRA11_Mm Unknown Y-chromosome 153 174 -443 4 1091 1022 155 125 0 chr15 66334273 66334473 -37160501 - URR1A DNA MER1_type 0 226 2 4 1091 296 323 21 10 chr15 66334615 66334712 -37160262 + MLT1A1 LTR MaLR 14 111 -297 4 1091 279 253 48 78 chr15 66335177 66335280 -37159694 + L2b LINE L2 3289 3426 0 4 1091 331 286 11 0 chr15 66336141 66336232 -37158742 + CT-rich Low_complexity Low_complexity 1 92 0 4 1091 4051 78 16 7 chr15 66336294 66336852 -37158122 - L1_Mus1 LINE L1 -1 6566 6004 4 1091 3313 31 0 0 chr15 66336841 66337231 -37157743 - L1Md_A LINE L1 0 6582 6193 4 1091 2652 60 19 1 chr15 66337231 66337594 -37157380 - L1_Mus1 LINE L1 -578 6004 5643 4 1091 3315 19 3 0 chr15 66337594 66337973 -37157001 - L1Md_F2 LINE L1 -13 6569 6190 4 1091 2441 92 0 64 chr15 66337973 66338014 -37156960 - L1_Mus1 LINE L1 -908 5659 5619 4 1091 330 89 0 0 chr15 66338024 66338069 -37156905 + L1_Mus1 LINE L1 5579 5623 -260 4 1091 261 211 0 0 chr15 66338328 66338380 -37156594 - MIR SINE MIR -89 173 122 4 1091 181 119 48 0 chr15 66338432 66338474 -37156500 + CT-rich Low_complexity Low_complexity 2 45 0 4 1091 697 298 18 9 chr15 66338474 66338694 -37156280 - ID_B1 SINE B4 -1 223 2 4 1091 554 316 169 61 chr15 66339369 66339777 -37155197 - MER77 LTR ERVL 0 607 156 4 1091 410 260 18 94 chr15 66340216 66340386 -37154588 - Charlie22a DNA MER1_type -258 233 77 4 1091 288 0 0 0 chr15 66340408 66340440 -37154534 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1091 284 352 99 78 chr15 66341280 66341563 -37153411 + B4 SINE B4 2 290 -2 4 1091 246 192 0 0 chr15 66341577 66341629 -37153345 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1091 290 318 22 150 chr15 66342533 66342759 -37152215 + L2b LINE L2 3177 3373 -2 4 1091 1770 161 42 55 chr15 66343279 66343661 -37151313 - ORR1C1 LTR MaLR 0 378 2 4 1091 458 289 16 9 chr15 66344005 66344153 -37150821 - B3A SINE B2 -34 159 9 4 1091 718 327 58 11 chr15 66344170 66344364 -37150610 - B4A SINE B4 -1 291 87 4 1091 225 0 0 0 chr15 66344364 66344389 -37150585 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1091 718 327 58 11 chr15 66344389 66344472 -37150502 - B4A SINE B4 -206 86 3 4 1091 215 325 146 31 chr15 66344477 66344607 -37150367 - MIRb SINE MIR -121 147 3 4 1091 285 29 0 0 chr15 66344862 66344896 -37150078 + (TATG)n Simple_repeat Simple_repeat 2 35 0 4 1091 212 243 14 41 chr15 66345845 66345918 -37149056 + GA-rich Low_complexity Low_complexity 2 72 0 4 1091 183 312 75 0 chr15 66346821 66346914 -37148060 - L2a LINE L2 -32 3394 3295 4 1091 369 43 0 0 chr15 66347694 66347741 -37147233 + (CATA)n Simple_repeat Simple_repeat 2 48 0 4 1091 297 189 0 0 chr15 66347746 66347799 -37147175 - B3 SINE B2 -162 54 2 4 1091 923 313 74 6 chr15 66347870 66348182 -37146792 - MLT2C2 LTR ERVL -125 339 7 4 1091 1022 288 31 126 chr15 66348701 66349114 -37145860 - MTE2a LTR MaLR 0 379 6 4 1091 618 286 138 35 chr15 66349156 66349417 -37145557 + MLT1A LTR MaLR 31 318 -56 4 1091 8440 11 2 0 chr15 66351228 66352632 -37142342 - L1Md_T LINE L1 -2 6580 5174 4 1091 480 372 49 35 chr15 66352993 66353341 -37141633 + MT2A LTR ERVL 1 353 -180 4 1091 241 376 91 86 chr15 66353488 66353678 -37141296 - MER21B LTR ERV1 -225 638 452 5 1091 1607 41 0 20 chr15 66353678 66353875 -37141099 + B2_Mm1t SINE B2 1 193 0 5 1091 284 395 167 58 chr15 66353875 66354241 -37140733 - MER21B LTR ERV1 -412 451 41 5 1091 660 261 137 20 chr15 66354534 66354852 -37140122 - RMER20B LTR ERVK -5 511 147 5 1091 450 0 0 0 chr15 66354852 66354902 -37140072 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1091 660 228 147 26 chr15 66354902 66354958 -37140016 - RMER20B LTR ERVK -481 146 92 5 1091 1716 101 31 41 chr15 66355505 66355824 -37139150 + RLTR10A LTR ERVK 96 411 0 5 1091 3659 220 21 32 chr15 66355849 66356651 -37138323 + Lx5 LINE L1 6255 7047 -3 5 1091 310 232 0 0 chr15 66356700 66356769 -37138205 + L1M3 LINE L1 4879 4947 -1193 5 1091 364 364 116 25 chr15 66356769 66357096 -37137878 - ORR1E LTR MaLR -2 357 1 5 1091 396 236 21 21 chr15 66357257 66357400 -37137574 + L1M3 LINE L1 5095 5237 -903 5 1091 453 340 0 39 chr15 66357444 66357597 -37137377 + B1F SINE Alu 1 147 -2 5 1091 1188 255 36 62 chr15 66357825 66358214 -37136760 - MTEa LTR MaLR 0 379 1 5 1091 413 333 120 49 chr15 66358582 66358948 -37136026 - MLT1A1 LTR MaLR -2 406 15 5 1091 1282 125 81 9 chr15 66359788 66359998 -37134976 - URR1A DNA MER1_type -1 225 1 5 1091 1169 271 33 81 chr15 66360116 66360509 -37134465 + MTE2a LTR MaLR 6 379 0 5 1091 214 240 20 0 chr15 66361264 66361314 -37133660 + GA-rich Low_complexity Low_complexity 6 56 0 5 1091 1481 75 5 23 chr15 66361969 66362187 -37132787 + L1_Mus2 LINE L1 6353 6566 0 5 1091 818 335 12 18 chr15 66362414 66362742 -37132232 + Lx8 LINE L1 6974 7299 -174 5 1091 339 228 0 0 chr15 66362770 66362862 -37132112 + (TA)n Simple_repeat Simple_repeat 2 93 0 5 1091 22 35 0 0 chr15 66364227 66364256 -37130718 + AT_rich Low_complexity Low_complexity 1 29 0 5 1091 251 307 16 8 chr15 66364462 66364590 -37130384 + L1MD LINE L1 4730 4858 -1288 5 1091 359 215 84 21 chr15 66364717 66364812 -37130162 - B2_Mm2 SINE B2 -93 102 2 5 1091 603 306 37 56 chr15 66364813 66365274 -37129700 + L1MC LINE L1 4847 5298 -848 5 1091 261 244 71 65 chr15 66365359 66365543 -37129431 + L1MC LINE L1 5282 5466 -878 5 1091 246 291 19 10 chr15 66365640 66365744 -37129230 + L1MC4 LINE L1 5533 5637 -542 5 1091 504 220 144 32 chr15 66365913 66366101 -37128873 - L1_Mur3 LINE L1 -3072 2808 2600 5 1091 217 25 0 91 chr15 66366166 66366210 -37128764 + (TCTCTG)n Simple_repeat Simple_repeat 2 41 0 5 1091 333 206 122 0 chr15 66366319 66366426 -37128548 + L1_Mur3 LINE L1 2615 2734 -3146 5 1091 30 45 0 0 chr15 66366461 66366505 -37128469 + AT_rich Low_complexity Low_complexity 1 44 0 5 1091 225 234 0 15 chr15 66366510 66366575 -37128399 + L1_Mur3 LINE L1 2739 2802 -3078 5 1091 462 303 138 23 chr15 66366649 66366997 -37127977 + L1MC4 LINE L1 6490 6877 -1165 5 1091 202 312 130 34 chr15 66367027 66367173 -37127801 - L2 LINE L2 -741 2678 2519 5 1091 297 359 96 14 chr15 66367187 66367396 -37127578 + Kanga1c DNA Tc2 1 226 -503 5 1091 398 357 7 7 chr15 66367432 66367573 -37127401 + ID_B1 SINE B4 80 220 -4 5 1091 420 306 124 30 chr15 66367860 66368321 -37126653 - L1MC3 LINE L1 -190 7595 7092 5 1091 396 0 0 0 chr15 66368927 66368971 -37126003 + (TC)n Simple_repeat Simple_repeat 2 45 0 5 1091 351 0 0 0 chr15 66368971 66369009 -37125965 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1091 421 349 15 8 chr15 66369023 66369153 -37125821 - RSINE1 SINE B4 -31 134 4 5 1091 284 324 133 49 chr15 66369157 66369420 -37125554 - L2a LINE L2 -111 3315 3031 5 1091 460 295 85 8 chr15 66370611 66370741 -37124233 + B3 SINE B2 64 203 -13 5 1091 463 314 67 10 chr15 66370963 66371172 -37123802 - MIRc SINE MIR 0 268 48 5 1091 353 83 30 50 chr15 66372686 66372787 -37122187 + T-rich Low_complexity Low_complexity 2 100 0 5 1091 744 12 0 0 chr15 66373346 66373431 -37121543 + (TC)n Simple_repeat Simple_repeat 2 86 0 5 1091 441 0 0 0 chr15 66373473 66373522 -37121452 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 5 1091 800 262 44 129 chr15 66373556 66373968 -37121006 - MTE2a LTR MaLR 0 379 3 5 1091 636 14 0 0 chr15 66375629 66375702 -37119272 + (GA)n Simple_repeat Simple_repeat 1 73 0 5 1091 3224 19 48 0 chr15 66375897 66376275 -37118699 + MTA_Mm LTR MaLR 1 396 0 5 1091 216 0 0 0 chr15 66377298 66377322 -37117652 + (CGGGG)n Simple_repeat Simple_repeat 1 24 0 5 1091 1041 269 128 49 chr15 66377886 66378473 -37116501 + L1MA10 LINE L1 5694 6326 -8 5 1091 862 277 87 21 chr15 66379666 66380001 -37114973 + ORR1E LTR MaLR 1 357 -2 5 1091 2802 95 10 14 chr15 66380128 66380544 -37114430 + L1_Mus3 LINE L1 6224 6637 -1 5 1091 539 204 139 87 chr15 66380867 66381039 -37113935 + B3A SINE B2 1 181 -14 5 1091 316 345 14 0 chr15 66381090 66381232 -37113742 - MIRb SINE MIR -57 211 68 5 1091 414 0 0 0 chr15 66381797 66381843 -37113131 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1091 203 371 45 0 chr15 66382012 66382101 -37112873 + L2a LINE L2 3286 3378 -48 5 1091 265 159 16 16 chr15 66382115 66382179 -37112795 + (TA)n Simple_repeat Simple_repeat 2 65 0 5 1091 299 371 46 17 chr15 66382322 66382495 -37112479 + MER45A DNA Tip100 1 178 0 5 1091 1831 205 53 19 chr15 66383844 66384222 -37110752 + MTC LTR MaLR 18 408 -13 5 1091 363 44 0 0 chr15 66384234 66384279 -37110695 + (TTTTC)n Simple_repeat Simple_repeat 3 47 0 5 1091 701 192 14 7 chr15 66384284 66384431 -37110543 + RMER5 LTR ERV1 382 529 -5 5 1091 271 32 77 31 chr15 66384431 66384496 -37110478 + (TTTTG)n Simple_repeat Simple_repeat 2 69 0 5 1091 402 278 17 34 chr15 66384737 66384856 -37110118 - RMER5 LTR ERV1 -10 524 408 5 1091 435 241 26 9 chr15 66384811 66384924 -37110050 + RMER5 LTR ERV1 415 529 -5 5 1091 637 330 45 0 chr15 66385041 66385262 -37109712 - MIR SINE MIR -24 238 8 5 1091 387 0 0 0 chr15 66385813 66385856 -37109118 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1091 783 318 65 35 chr15 66385856 66386117 -37108857 - B4A SINE B4 -23 269 1 5 1091 191 114 29 0 chr15 66387614 66387649 -37107325 + (GGGAGA)n Simple_repeat Simple_repeat 5 40 0 5 1091 228 314 41 13 chr15 66388200 66388321 -37106653 - MIRb SINE MIR -141 127 2 5 1091 1412 201 55 71 chr15 66388630 66389010 -37105964 + ORR1D1 LTR MaLR 1 374 0 5 1091 663 264 224 8 chr15 66389865 66390102 -37104872 - B4A SINE B4 -2 290 3 5 1091 198 222 0 0 chr15 66391599 66391653 -37103321 + (TA)n Simple_repeat Simple_repeat 1 54 0 5 1091 1362 90 5 52 chr15 66393007 66393217 -37101757 - L1_Mus2 LINE L1 -179 6387 6188 5 1091 273 252 139 9 chr15 66393247 66393355 -37101619 + MIRc SINE MIR 82 203 -65 5 1091 181 326 159 26 chr15 66393540 66393773 -37101201 + L2 LINE L2 2645 2908 -511 5 1091 270 229 43 0 chr15 66394348 66394418 -37100556 + MLT2F LTR ERVL 2 74 -589 5 1091 732 284 60 142 chr15 66394490 66394905 -37100069 + MTE2a LTR MaLR 1 375 -44 5 1091 363 366 72 51 chr15 66394996 66395385 -37099589 + MLT2F LTR ERVL 263 659 -4 5 1091 21 0 0 75 chr15 66395595 66395635 -37099339 + AT_rich Low_complexity Low_complexity 1 37 0 5 1091 6001 81 13 4 chr15 66395654 66396480 -37098494 + L1_Mus3 LINE L1 5799 6632 -6 5 1091 718 301 15 0 chr15 66396489 66396676 -37098298 - B3 SINE B2 -3 195 2 5 1091 249 33 0 0 chr15 66396698 66396728 -37098246 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1091 234 0 0 0 chr15 66396728 66396753 -37098221 + (GA)n Simple_repeat Simple_repeat 1 26 0 5 1091 476 149 234 0 chr15 66396999 66397093 -37097881 - B1_Mm SINE Alu 0 147 32 5 1091 284 300 28 74 chr15 66397093 66397107 -37097867 - ID_B1 SINE B4 -1 223 121 5 1091 239 0 0 31 chr15 66397818 66397850 -37097124 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 5 1091 2018 159 49 11 chr15 66397850 66398199 -37096775 - ORR1C2 LTR MaLR -22 362 1 5 1091 363 44 0 0 chr15 66398680 66398725 -37096249 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1091 520 40 27 0 chr15 66398784 66398859 -37096115 + (TAGA)n Simple_repeat Simple_repeat 2 78 0 5 1091 208 224 128 26 chr15 66399171 66399249 -37095725 - MIR SINE MIR -70 192 107 5 1091 431 293 71 12 chr15 66399902 66400071 -37094903 + B4A SINE B4 55 233 -59 5 1091 793 201 135 5 chr15 66400286 66400471 -37094503 + B3 SINE B2 1 209 -7 5 1091 762 203 56 11 chr15 66400633 66400812 -37094162 - B2_Mm2 SINE B2 -8 187 1 5 1091 186 103 0 0 chr15 66400943 66400972 -37094002 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 1091 472 326 85 20 chr15 66400991 66401332 -37093642 + MLT1A0 LTR MaLR 2 364 -1 5 1091 471 18 0 0 chr15 66402502 66402558 -37092416 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1091 203 88 29 0 chr15 66402558 66402592 -37092382 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 1091 4746 63 21 6 chr15 66402609 66403235 -37091739 + L1Md_F2 LINE L1 5948 6582 0 5 1091 249 374 61 61 chr15 66403398 66403660 -37091314 - B4A SINE B4 -30 262 1 5 1091 203 197 56 14 chr15 66404361 66404433 -37090541 + (CATA)n Simple_repeat Simple_repeat 4 78 0 5 1091 379 357 74 11 chr15 66405242 66405511 -37089463 - B4A SINE B4 -2 290 5 5 1091 1812 170 9 22 chr15 66405631 66405950 -37089024 + ORR1B2 LTR MaLR 1 315 -52 5 1091 2661 243 68 58 chr15 66405951 66406802 -37088172 + RMER13A LTR ERVK 1 860 0 5 1091 445 385 60 17 chr15 66406820 66407055 -37087919 - MER20B DNA MER1_type -536 247 3 5 1091 201 74 0 0 chr15 66407433 66407460 -37087514 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 1091 261 0 0 0 chr15 66407524 66407553 -37087421 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 5 1091 279 191 0 0 chr15 66409151 66409214 -37085760 + (CGG)n Simple_repeat Simple_repeat 1 63 0 5 1091 21 36 0 0 chr15 66409252 66409280 -37085694 + GC_rich Low_complexity Low_complexity 1 28 0 5 1091 21 0 0 0 chr15 66410278 66410299 -37084675 + AT_rich Low_complexity Low_complexity 1 21 0 6 1091 198 0 0 0 chr15 66410723 66410745 -37084229 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1091 989 48 0 171 chr15 66410846 66411022 -37083952 + B1_Mus2 SINE Alu 1 146 -1 6 1091 183 42 0 0 chr15 66411022 66411046 -37083928 + (GAAA)n Simple_repeat Simple_repeat 1 24 0 6 1091 333 0 0 0 chr15 66412967 66413004 -37081970 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1091 207 0 0 0 chr15 66413004 66413026 -37081948 + (TA)n Simple_repeat Simple_repeat 1 23 0 6 1091 198 0 0 0 chr15 66413026 66413047 -37081927 + (GA)n Simple_repeat Simple_repeat 2 23 0 6 1091 474 18 0 0 chr15 66413071 66413126 -37081848 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 1091 468 208 206 8 chr15 66413570 66413701 -37081273 - RMER19B LTR ERVK 0 902 746 6 1091 259 81 0 0 chr15 66413707 66413744 -37081230 - RMER19B LTR ERVK -865 37 1 6 1091 772 296 6 17 chr15 66414216 66414395 -37080579 + B3A SINE B2 20 196 -2 6 1091 526 193 100 78 chr15 66414395 66414575 -37080399 - B2_Mm2 SINE B2 -10 185 2 6 1091 271 281 119 50 chr15 66414632 66414733 -37080241 + PB1D10 SINE Alu 1 108 -41 6 1091 334 309 0 0 chr15 66414748 66414816 -37080158 + ID4 SINE ID 7 74 -9 6 1091 22 0 0 0 chr15 66415329 66415351 -37079623 + AT_rich Low_complexity Low_complexity 1 22 0 6 1091 348 259 57 0 chr15 66418236 66418329 -37076645 + PB1D10 SINE Alu 9 112 -8 6 1091 378 0 0 0 chr15 66419410 66419452 -37075522 + (TC)n Simple_repeat Simple_repeat 1 42 0 6 1091 29 60 0 0 chr15 66419491 66419541 -37075433 + AT_rich Low_complexity Low_complexity 1 50 0 6 1091 236 251 53 18 chr15 66419961 66420131 -37074843 + (TA)n Simple_repeat Simple_repeat 2 177 0 6 1091 283 250 13 13 chr15 66420788 66420865 -37074109 + (TA)n Simple_repeat Simple_repeat 1 77 0 6 1091 2005 154 30 8 chr15 66421758 66422124 -37072850 - Lx3B LINE L1 -5 6968 6595 6 1091 396 59 0 0 chr15 66423089 66423140 -37071834 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1091 234 279 0 16 chr15 66423419 66423481 -37071493 + CT-rich Low_complexity Low_complexity 1 61 0 6 1091 251 319 0 0 chr15 66423483 66423555 -37071419 - ID2 SINE ID -10 73 2 6 1091 191 312 31 31 chr15 66424527 66424623 -37070351 - MIRm SINE MIR -25 251 156 6 1091 347 363 100 19 chr15 66425563 66425723 -37069251 + B4 SINE B4 20 192 -100 6 1091 599 239 103 67 chr15 66428221 66428445 -37066529 - Lx8 LINE L1 -643 6830 6599 6 1091 30 0 0 0 chr15 66429888 66429918 -37065056 + AT_rich Low_complexity Low_complexity 1 30 0 6 1091 22 35 0 0 chr15 66430028 66430057 -37064917 + AT_rich Low_complexity Low_complexity 1 29 0 6 1091 10345 42 0 2 chr15 66430359 66432338 -37062636 - L1Md_F2 LINE L1 -1 6581 4608 6 1091 50 65 0 0 chr15 66432349 66432441 -37062533 + AT_rich Low_complexity Low_complexity 1 92 0 6 1091 397 303 0 10 chr15 66434157 66434257 -37060717 - ID_B1 SINE B4 -5 219 121 6 1091 496 254 129 71 chr15 66434841 66434981 -37059993 + RSINE1 SINE B4 3 150 -15 6 1091 341 252 9 66 chr15 66436603 66436709 -37058265 + MIRc SINE MIR 110 209 -59 6 1091 21 0 0 0 chr15 66439909 66439930 -37055044 + AT_rich Low_complexity Low_complexity 1 21 0 6 1091 25 31 0 0 chr15 66444547 66444579 -37050395 + AT_rich Low_complexity Low_complexity 1 32 0 6 1091 218 149 41 41 chr15 66447587 66447636 -37047338 + CT-rich Low_complexity Low_complexity 4 52 0 6 1091 266 266 26 52 chr15 66447646 66447761 -37047213 - Lx4B LINE L1 -6 7052 6941 6 1091 441 0 0 0 chr15 66447765 66447814 -37047160 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1091 375 222 0 0 chr15 66447931 66448003 -37046971 + B1_Mur1 SINE Alu 77 148 -1 6 1091 489 257 143 0 chr15 66448913 66449053 -37045921 + B3 SINE B2 48 207 -9 6 1091 792 268 126 26 chr15 66449369 66449599 -37045375 - MTE2b LTR MaLR -52 327 75 6 1091 1161 28 14 0 chr15 66449614 66449757 -37045217 + B1_Mm SINE Alu 3 147 0 6 1091 287 312 77 35 chr15 66450041 66450184 -37044790 - B1F SINE Alu 0 149 1 6 1091 630 257 19 26 chr15 66451045 66451201 -37043773 + RSINE1 SINE B4 8 162 -3 6 1091 408 40 0 0 chr15 66451203 66451253 -37043721 + (TGGA)n Simple_repeat Simple_repeat 3 52 0 6 1091 238 197 69 14 chr15 66452637 66452709 -37042265 + Charlie18a DNA MER1_type 233 308 -34 6 1092 251 365 58 6 chr15 66453978 66454149 -37040825 - MIRb SINE MIR -36 232 53 6 1092 24 53 0 0 chr15 66455161 66455199 -37039775 + AT_rich Low_complexity Low_complexity 1 38 0 6 1092 205 217 0 21 chr15 66455555 66455602 -37039372 + A-rich Low_complexity Low_complexity 2 47 0 6 1092 213 94 0 0 chr15 66455615 66455647 -37039327 + (GAA)n Simple_repeat Simple_repeat 2 33 0 6 1092 324 0 0 0 chr15 66455937 66455973 -37039001 + (GA)n Simple_repeat Simple_repeat 1 36 0 6 1092 544 301 39 43 chr15 66455997 66456223 -37038751 - B4A SINE B4 0 292 83 6 1092 351 306 144 64 chr15 66456327 66456667 -37038307 + L1MEe LINE L1 260 631 -4223 6 1092 599 267 7 14 chr15 66456667 66456815 -37038159 + B1F1 SINE Alu 3 149 0 6 1092 351 306 144 64 chr15 66456815 66456945 -37038029 + L1MEe LINE L1 632 767 -4087 6 1092 624 310 44 50 chr15 66457000 66457180 -37037794 + B4 SINE B4 112 290 -2 6 1092 238 102 16 33 chr15 66457438 66457499 -37037475 + T-rich Low_complexity Low_complexity 2 61 0 6 1092 229 289 0 95 chr15 66457519 66457603 -37037371 + B1F1 SINE Alu 22 97 -52 6 1092 494 292 19 32 chr15 66457803 66458027 -37036947 + MLT1C LTR MaLR 177 467 0 6 1092 345 319 122 79 chr15 66458781 66459135 -37035839 - MLT1D LTR MaLR -117 388 20 6 1092 232 268 38 76 chr15 66460764 66460869 -37034105 + YREP_Mm Unknown Unknown 196 296 -1516 6 1092 355 298 11 0 chr15 66460795 66460889 -37034085 - ID_B1 SINE B4 -48 176 82 6 1092 229 318 22 67 chr15 66460889 66460930 -37034044 - MT2B2 LTR ERVL -333 251 123 6 1092 220 228 121 17 chr15 66460931 66460989 -37033985 + MIRb SINE MIR 197 260 -8 6 1092 793 174 80 23 chr15 66463177 66463353 -37031621 + B2_Mm2 SINE B2 1 186 -9 6 1092 192 77 0 0 chr15 66463353 66463379 -37031595 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 6 1092 685 280 109 14 chr15 66463401 66463611 -37031363 + B4A SINE B4 51 280 -12 6 1092 943 217 39 0 chr15 66464496 66464703 -37030271 - B3 SINE B2 -1 215 1 6 1092 4042 73 0 4 chr15 66464725 66465258 -37029716 - L1_Mus1 LINE L1 0 6567 6037 6 1092 820 169 0 68 chr15 66465503 66465649 -37029325 + B1_Mus1 SINE Alu 2 137 -11 6 1092 230 280 60 70 chr15 66465652 66465752 -37029222 + BGLII_Mus LTR ERVK 53 151 -271 6 1092 1058 144 133 0 chr15 66466909 66467104 -37027870 + URR1B DNA MER1_type 1 221 -4 6 1092 783 233 20 45 chr15 66467602 66467804 -37027170 - B3A SINE B2 -1 197 1 6 1092 216 0 0 0 chr15 66469045 66469069 -37025905 + (TTA)n Simple_repeat Simple_repeat 1 24 0 6 1092 1565 100 81 4 chr15 66469069 66469317 -37025657 - L1Md_F2 LINE L1 -23 6559 6286 6 1092 6181 28 0 0 chr15 66469862 66470772 -37024202 - L1Md_F2 LINE L1 -526 6056 5147 6 1092 4230 46 2 9 chr15 66470772 66471301 -37023673 + L1Md_F2 LINE L1 6058 6582 0 6 1092 872 301 14 38 chr15 66472581 66472868 -37022106 + B4 SINE B4 5 284 -8 6 1092 26 0 0 0 chr15 66474507 66474533 -37020441 + AT_rich Low_complexity Low_complexity 1 26 0 6 1092 183 300 86 0 chr15 66477441 66477511 -37017463 + MIRb SINE MIR 118 193 -75 6 1092 352 311 103 46 chr15 66477798 66477973 -37017001 - LTR16E1 LTR ERVL -3 535 351 6 1092 21 57 0 0 chr15 66478453 66478488 -37016486 + AT_rich Low_complexity Low_complexity 1 35 0 6 1092 198 0 0 0 chr15 66478583 66478605 -37016369 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1092 208 319 0 14 chr15 66478680 66478753 -37016221 - L4 LINE RTE -734 1295 1224 6 1092 200 224 39 13 chr15 66479718 66479795 -37015179 + T-rich Low_complexity Low_complexity 2 80 0 6 1092 1725 59 9 0 chr15 66480576 66480795 -37014179 + L1Md_F2 LINE L1 6032 6252 -330 6 1092 244 77 19 37 chr15 66480791 66480845 -37014129 + L1Md_F2 LINE L1 6526 6578 -4 6 1092 23 54 0 0 chr15 66480857 66480894 -37014080 + AT_rich Low_complexity Low_complexity 1 37 0 6 1092 1239 157 123 1 chr15 66481017 66481414 -37013560 + L1_Mur3 LINE L1 1053 1506 -4374 6 1092 332 22 22 0 chr15 66481414 66481459 -37013515 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 6 1092 1199 152 165 0 chr15 66481459 66481522 -37013452 + L1_Mur3 LINE L1 1507 1569 -4311 6 1092 893 125 13 7 chr15 66481522 66481675 -37013299 + L1_Mur3 LINE L1 1827 1980 -3900 6 1092 2340 42 0 0 chr15 66481686 66481969 -37013005 - L1Md_A LINE L1 -1 6581 6299 6 1092 1237 287 86 58 chr15 66482000 66482057 -37012917 + L1M2 LINE L1 4474 4530 -1613 6 1092 3139 81 16 0 chr15 66482057 66482487 -37012487 + Lx3_Mus LINE L1 6573 7009 0 6 1092 1237 287 86 58 chr15 66482487 66483135 -37011839 + L1M2 LINE L1 4531 5199 -944 6 1092 1780 186 48 12 chr15 66483561 66484135 -37010839 + L1_Mur2 LINE L1 919 1513 -4364 6 1092 1231 74 6 6 chr15 66484157 66484242 -37010732 + (GAA)n Simple_repeat Simple_repeat 2 87 0 6 1092 1415 0 23 0 chr15 66484242 66484417 -37010557 + (GGA)n Simple_repeat Simple_repeat 1 179 0 6 1092 1231 74 6 6 chr15 66484417 66484508 -37010466 + (GAA)n Simple_repeat Simple_repeat 1 91 0 6 1092 6517 163 100 5 chr15 66484508 66485819 -37009155 + L1_Mur2 LINE L1 1485 2919 -2958 6 1092 420 338 23 88 chr15 66485820 66485873 -37009101 + MTE2b-int LTR MaLR 285 330 -1250 6 1092 3923 70 8 4 chr15 66485873 66486390 -37008584 - L1Md_F2 LINE L1 -3 6579 6061 6 1092 420 338 23 88 chr15 66486390 66486599 -37008375 + MTE2b-int LTR MaLR 331 530 -1050 6 1092 34783 39 3 38 chr15 66486599 66491742 -37003232 + L1Md_F2 LINE L1 631 5586 -297 6 1092 8066 41 1 3 chr15 66491742 66492727 -37002247 + L1Md_F2 LINE L1 5587 6569 -13 6 1092 539 309 93 28 chr15 66492780 66492996 -37001978 + MTE2b-int LTR MaLR 577 806 -774 6 1092 2192 266 57 12 chr15 66492989 66493570 -37001404 + MTE2b-int LTR MaLR 971 1577 -3 6 1092 817 301 123 18 chr15 66493577 66493896 -37001078 + MTE2b LTR MaLR 10 367 -12 6 1092 430 283 68 107 chr15 66494081 66494534 -37000440 - L1MDa LINE L1 -1995 4542 4095 6 1092 484 84 69 46 chr15 66494595 66494671 -37000303 + L1_Mus3 LINE L1 6188 6266 -372 6 1092 3039 81 14 0 chr15 66494671 66495090 -36999884 + L1_Mus3 LINE L1 6211 6635 -3 7 1092 405 213 82 0 chr15 66495102 66495209 -36999765 - L1MDa LINE L1 -2519 4018 3902 6 1092 3273 36 0 0 chr15 66495210 66495630 -36999344 - L1Md_T LINE L1 0 6582 6190 7 1092 222 143 0 0 chr15 66495630 66495644 -36999330 + (T)n Simple_repeat Simple_repeat 1 14 0 7 1092 353 287 100 29 chr15 66495723 66495863 -36999111 - B3 SINE B2 0 216 67 7 1092 403 256 0 58 chr15 66496070 66496157 -36998817 - URR1B DNA MER1_type -143 82 1 7 1092 189 94 0 0 chr15 66496190 66496222 -36998752 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 7 1092 3011 56 15 8 chr15 66496231 66496624 -36998350 - MTA_Mm LTR MaLR 0 396 1 7 1092 2257 45 0 17 chr15 66496633 66496926 -36998048 + L1Md_F3 LINE L1 6297 6584 0 7 1092 315 299 88 31 chr15 66496933 66497161 -36997813 - L1MDa LINE L1 -2961 3576 3336 6 1092 941 252 62 12 chr15 66497322 66497563 -36997411 - MTEa LTR MaLR -126 253 1 7 1092 420 325 102 62 chr15 66498156 66499108 -36995866 - L1MDa LINE L1 -5508 1125 19 6 1092 961 287 81 14 chr15 66500766 66501126 -36993848 + MLT1B LTR MaLR 1 384 -6 1 1092 564 15 0 0 chr15 66501908 66501973 -36993001 + (GGAA)n Simple_repeat Simple_repeat 2 66 0 2 1092 347 277 73 20 chr15 66502483 66502652 -36992322 - MIRb SINE MIR -37 231 47 3 1092 2015 147 103 11 chr15 66505834 66506022 -36988952 - ORR1C2 LTR MaLR -2 382 178 4 1092 1378 27 0 18 chr15 66506022 66506250 -36988724 + (GA)n Simple_repeat Simple_repeat 1 224 0 5 1092 2015 147 103 11 chr15 66506250 66506410 -36988564 - ORR1C2 LTR MaLR -207 177 2 4 1092 248 137 0 19 chr15 66507167 66507219 -36987755 + GA-rich Low_complexity Low_complexity 1 51 0 6 1092 224 241 144 33 chr15 66507699 66507789 -36987185 + MIRm SINE MIR 73 172 -104 7 1092 666 0 0 0 chr15 66508425 66508499 -36986475 + (TC)n Simple_repeat Simple_repeat 1 74 0 8 1092 455 205 86 86 chr15 66509173 66509301 -36985673 - B1_Mur2 SINE Alu -19 130 3 9 1092 301 266 32 103 chr15 66509301 66509330 -36985644 - MT2B2 LTR ERVL -422 162 143 1 1092 463 266 166 11 chr15 66510036 66510211 -36984763 - RMER30 DNA MER1_type 0 202 1 1 1092 255 61 0 0 chr15 66511858 66511891 -36983083 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1092 616 287 81 107 chr15 66512535 66512918 -36982056 - MLT1B LTR MaLR -12 378 6 1 1092 342 261 31 94 chr15 66513072 66513102 -36981872 + MT2B LTR ERVL 139 160 -441 1 1092 763 164 37 1 chr15 66513102 66513241 -36981733 + B1_Mus1 SINE Alu 3 149 -1 1 1092 874 249 84 44 chr15 66514697 66514970 -36980004 + B4A SINE B4 2 285 -7 1 1092 380 194 19 0 chr15 66515893 66515996 -36978978 + (TCCA)n Simple_repeat Simple_repeat 1 105 0 1 1092 727 308 63 24 chr15 66516170 66516423 -36978551 + MTD LTR MaLR 8 270 -149 1 1092 404 263 44 41 chr15 66516455 66516607 -36978367 + MTD LTR MaLR 225 413 -6 1 1092 307 313 80 29 chr15 66518681 66518819 -36976155 - MIRb SINE MIR -119 149 5 1 1092 256 304 0 0 chr15 66519243 66519299 -36975675 - ID4 SINE ID -26 57 2 2 1092 434 284 21 43 chr15 66519324 66519464 -36975510 - B1F1 SINE Alu -9 140 4 2 1092 205 27 81 0 chr15 66519508 66519545 -36975429 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 2 1092 227 303 113 8 chr15 66519699 66519832 -36975142 + MIRb SINE MIR 44 190 -78 2 1092 702 244 25 25 chr15 66519843 66520045 -36974929 - RMER30 DNA MER1_type 0 202 1 2 1092 195 333 144 0 chr15 66522576 66522666 -36972308 + MIR SINE MIR 47 149 -59 2 1092 872 294 73 12 chr15 66522922 66523170 -36971804 + B4 SINE B4 26 288 -4 2 1092 333 0 0 0 chr15 66523198 66523235 -36971739 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1092 369 0 0 0 chr15 66523235 66523275 -36971699 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1092 196 248 93 56 chr15 66523546 66523653 -36971321 + MIRb SINE MIR 40 150 -118 2 1092 24 53 0 0 chr15 66525329 66525367 -36969607 + AT_rich Low_complexity Low_complexity 1 38 0 3 1092 203 113 15 46 chr15 66525481 66525546 -36969428 + A-rich Low_complexity Low_complexity 2 64 0 3 1092 573 248 0 8 chr15 66528353 66528471 -36966503 - B3A SINE B2 -72 126 10 3 1092 560 53 0 13 chr15 66528669 66528746 -36966228 + (TA)n Simple_repeat Simple_repeat 2 77 0 3 1092 522 0 0 0 chr15 66530369 66530427 -36964547 + (GGAA)n Simple_repeat Simple_repeat 3 60 0 3 1092 185 265 36 81 chr15 66530636 66530747 -36964227 - L3 LINE CR1 -1589 2900 2795 3 1092 404 294 103 43 chr15 66530761 66530946 -36964028 - MLT1D LTR MaLR -69 436 241 3 1092 256 282 38 114 chr15 66530962 66531094 -36963880 - MLT1D LTR MaLR -474 153 32 3 1092 735 124 0 0 chr15 66533564 66533709 -36961265 + (TC)n Simple_repeat Simple_repeat 1 145 0 3 1092 255 103 0 0 chr15 66533709 66533748 -36961226 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1092 514 186 81 7 chr15 66535007 66535246 -36959728 + RMER6C LTR ERVK 3 301 -455 3 1092 249 227 54 126 chr15 66535228 66535339 -36959635 - Tigger7 DNA MER2_type -1175 1316 1214 4 1092 1081 86 0 0 chr15 66535558 66535698 -36959276 + B1_Mus1 SINE Alu 1 140 -8 4 1092 411 21 0 0 chr15 66535698 66535746 -36959228 + (TAAAA)n Simple_repeat Simple_repeat 2 49 0 4 1092 239 263 45 146 chr15 66537130 66537219 -36957755 - MER20 DNA MER1_type -138 81 2 4 1092 336 312 105 70 chr15 66537257 66537457 -36957517 - MIRb SINE MIR -36 232 26 4 1092 396 286 68 49 chr15 66538335 66538497 -36956477 - MLT1A LTR MaLR -209 165 1 4 1092 435 19 0 0 chr15 66538536 66538588 -36956386 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1092 499 265 8 17 chr15 66539013 66539132 -36955842 - MLT1A0 LTR MaLR 0 365 248 4 1092 215 319 44 0 chr15 66539357 66539448 -36955526 + L3 LINE CR1 10 104 -4385 4 1092 192 319 116 0 chr15 66540258 66540327 -36954647 + MIRc SINE MIR 74 150 -118 4 1092 180 366 122 27 chr15 66540632 66540854 -36954120 - MIRb SINE MIR 0 268 26 5 1092 357 24 0 0 chr15 66540956 66540998 -36953976 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1092 255 284 91 73 chr15 66542433 66542543 -36952431 - MIRb SINE MIR -132 136 25 5 1092 282 116 0 0 chr15 66543434 66543477 -36951497 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 5 1092 7893 42 45 0 chr15 66543488 66544813 -36950161 - L1Md_F2 LINE L1 -11 6571 5209 5 1092 4592 71 2 35 chr15 66544821 66545450 -36949524 - L1Md_F2 LINE L1 0 6582 5975 5 1092 205 321 18 0 chr15 66547122 66547178 -36947796 - MIRb SINE MIR -179 89 33 5 1092 691 276 174 32 chr15 66547779 66548060 -36946914 - MLT1B LTR MaLR -69 321 1 5 1092 202 135 27 0 chr15 66548175 66548212 -36946762 + GA-rich Low_complexity Low_complexity 5 42 0 5 1092 423 0 0 0 chr15 66548537 66548584 -36946390 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1092 2389 91 12 14 chr15 66549100 66549446 -36945528 + Lx2 LINE L1 6641 6985 -12 6 1092 189 0 0 0 chr15 66549489 66549510 -36945464 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 6 1092 1837 174 74 12 chr15 66552263 66552600 -36942374 - Lx5 LINE L1 0 7050 6693 6 1092 427 81 0 0 chr15 66552589 66552651 -36942323 + Lx7 LINE L1 7559 7620 -76 6 1092 322 39 39 0 chr15 66552791 66552843 -36942131 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 6 1092 669 297 20 0 chr15 66552858 66553006 -36941968 - RSINE1 SINE B4 -12 153 3 6 1092 184 194 26 141 chr15 66554719 66554797 -36940177 + L3 LINE CR1 2630 2698 -1791 6 1092 207 360 12 0 chr15 66554867 66554953 -36940021 - L2b LINE L2 -191 3184 3098 6 1092 480 238 107 8 chr15 66558056 66558187 -36936787 - ID_B1 SINE B4 -13 211 68 6 1092 628 268 82 5 chr15 66558731 66558926 -36936048 + ID_B1 SINE B4 2 211 -13 6 1092 756 295 21 4 chr15 66559242 66559456 -36935518 - ID_B1 SINE B4 -69 223 1 7 1092 210 191 0 0 chr15 66560449 66560496 -36934478 + CT-rich Low_complexity Low_complexity 4 50 0 7 1092 444 37 0 0 chr15 66561484 66561538 -36933436 + (TA)n Simple_repeat Simple_repeat 2 55 0 7 1092 321 304 109 48 chr15 66561635 66561929 -36933045 - MLT1H LTR MaLR -209 340 29 7 1092 228 219 61 30 chr15 66562498 66562564 -36932410 - MIR SINE MIR -106 156 89 7 1092 1032 38 0 0 chr15 66563141 66563274 -36931700 + (TG)n Simple_repeat Simple_repeat 2 134 0 7 1092 793 269 57 50 chr15 66563278 66563540 -36931434 - B4 SINE B4 -27 265 2 7 1092 516 172 17 33 chr15 66563564 66563744 -36931230 + (TG)n Simple_repeat Simple_repeat 1 177 0 7 1092 547 215 6 22 chr15 66563826 66564007 -36930967 + (TATG)n Simple_repeat Simple_repeat 1 178 0 7 1092 378 195 0 0 chr15 66565473 66565555 -36929419 + (TG)n Simple_repeat Simple_repeat 2 83 0 7 1092 468 273 6 95 chr15 66565556 66565714 -36929260 - RSINE1 SINE B4 0 165 22 8 1092 219 146 0 0 chr15 66565803 66565844 -36929130 + (TTG)n Simple_repeat Simple_repeat 2 42 0 8 1092 2234 46 0 0 chr15 66566360 66566622 -36928352 + L1_Mus1 LINE L1 6163 6424 -143 8 1092 357 24 0 0 chr15 66568130 66568172 -36926802 + (TCCA)n Simple_repeat Simple_repeat 1 42 0 8 1092 1251 235 161 0 chr15 66568522 66568871 -36926103 + MTD LTR MaLR 1 405 -14 8 1092 351 0 0 0 chr15 66569250 66569289 -36925685 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1092 473 187 0 18 chr15 66569292 66569401 -36925573 + Lx9 LINE L1 7532 7638 -6 8 1092 24 0 0 0 chr15 66569436 66569460 -36925514 + AT_rich Low_complexity Low_complexity 1 24 0 8 1092 183 80 0 0 chr15 66569462 66569487 -36925487 + (TAGA)n Simple_repeat Simple_repeat 3 27 0 8 1092 645 269 81 0 chr15 66570338 66570498 -36924476 + ID_B1 SINE B4 45 217 -7 8 1092 289 276 8 103 chr15 66572690 66572807 -36922167 + MIRb SINE MIR 61 166 -102 9 1092 528 329 97 31 chr15 66577300 66577620 -36917354 - MER21B LTR ERV1 -57 806 466 9 1092 325 250 25 0 chr15 66577635 66577715 -36917259 + ID4_ SINE ID 2 83 0 9 1092 181 91 0 64 chr15 66578657 66578704 -36916270 + T-rich Low_complexity Low_complexity 2 45 0 9 1092 1855 78 27 27 chr15 66578723 66578986 -36915988 - L1_Mus1 LINE L1 0 6567 6305 9 1092 248 244 37 18 chr15 66579912 66580002 -36914972 - MIRb SINE MIR -61 201 113 9 1092 261 0 0 0 chr15 66581488 66581517 -36913457 + (CA)n Simple_repeat Simple_repeat 1 29 0 9 1092 396 0 0 0 chr15 66582660 66582704 -36912270 + (TG)n Simple_repeat Simple_repeat 1 44 0 9 1092 245 278 33 22 chr15 66584417 66584509 -36910465 - L1MA7 LINE L1 -75 6216 6124 9 1093 1223 54 0 0 chr15 66584667 66584814 -36910160 - B1_Mm SINE Alu 0 147 1 9 1093 623 25 12 0 chr15 66586448 66586529 -36908445 + (CA)n Simple_repeat Simple_repeat 2 83 0 1 1093 419 350 42 66 chr15 66587391 66587679 -36907295 + MLT1A0 LTR MaLR 64 344 -21 1 1093 213 296 0 0 chr15 66590228 66590272 -36904702 - MER91C DNA Tip100 -19 121 78 1 1093 300 213 8 16 chr15 66590770 66590899 -36904075 + (TGGA)n Simple_repeat Simple_repeat 3 130 0 1 1093 224 283 68 13 chr15 66591441 66591596 -36903378 - MIRc SINE MIR -101 167 3 1 1093 328 317 0 0 chr15 66591660 66591742 -36903232 + ID4 SINE ID 2 83 0 1 1093 7265 12 0 0 chr15 66592661 66593464 -36901510 - L1Md_T LINE L1 0 6582 5780 1 1093 1542 166 66 57 chr15 66594964 66595296 -36899678 + Lx4B LINE L1 6722 7056 -2 1 1093 219 290 0 31 chr15 66596464 66596528 -36898446 + CT-rich Low_complexity Low_complexity 1 62 0 1 1093 386 252 10 22 chr15 66596530 66596639 -36898335 - PB1D10 SINE Alu -7 110 2 1 1093 271 316 147 20 chr15 66599764 66599961 -36895013 - MLT1B LTR MaLR -162 228 7 1 1093 196 350 39 91 chr15 66602165 66602319 -36892655 - MIRm SINE MIR -122 154 9 1 1093 270 0 0 0 chr15 66602523 66602553 -36892421 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1093 984 308 44 18 chr15 66603770 66604111 -36890863 - MTEa LTR MaLR -8 371 22 1 1093 204 40 0 0 chr15 66605353 66605378 -36889596 + (CTG)n Simple_repeat Simple_repeat 2 26 0 1 1093 241 375 0 71 chr15 66605906 66606018 -36888956 - B1_Mus2 SINE Alu -43 104 1 1 1093 464 278 37 0 chr15 66605920 66606028 -36888946 - B4 SINE B4 -105 187 76 1 1093 268 332 102 39 chr15 66606047 66606410 -36888564 - L1MB4 LINE L1 -75 6105 5720 1 1093 603 319 75 93 chr15 66606595 66606875 -36888099 + B4 SINE B4 6 280 -12 1 1093 199 284 33 43 chr15 66608250 66608342 -36886632 - MIRm SINE MIR -135 141 51 1 1093 800 138 7 0 chr15 66608404 66608542 -36886432 + B1_Mur4 SINE Alu 12 150 0 1 1093 849 198 138 11 chr15 66609294 66609483 -36885491 - B3 SINE B2 -3 213 1 1 1093 1803 193 41 28 chr15 66610293 66610655 -36884319 + ORR1B2 LTR MaLR 1 367 0 1 1093 192 179 0 0 chr15 66615131 66615170 -36879804 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1093 264 372 6 19 chr15 66615788 66615947 -36879027 + GA-rich Low_complexity Low_complexity 4 160 0 1 1093 236 358 56 26 chr15 66617672 66617874 -36877100 - MIR SINE MIR -8 260 52 1 1093 1424 180 88 3 chr15 66619930 66620248 -36874726 + Lx9 LINE L1 7298 7642 -2 1 1093 24 32 0 0 chr15 66620250 66620281 -36874693 + AT_rich Low_complexity Low_complexity 1 31 0 1 1093 259 120 79 13 chr15 66620315 66620391 -36874583 + (TA)n Simple_repeat Simple_repeat 2 82 0 1 1093 207 364 11 11 chr15 66623425 66623514 -36871460 - MIR SINE MIR -137 125 37 1 1093 188 258 31 31 chr15 66623598 66623662 -36871312 - MIR SINE MIR -55 153 90 1 1093 396 0 0 0 chr15 66624030 66624074 -36870900 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1093 306 0 0 0 chr15 66624074 66624107 -36870867 + (GA)n Simple_repeat Simple_repeat 1 34 0 1 1093 294 273 0 15 chr15 66624128 66624195 -36870779 - B4 SINE B4 -10 282 217 1 1093 387 0 0 0 chr15 66624222 66624265 -36870709 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1093 568 310 0 27 chr15 66624304 66624453 -36870521 - RSINE1 SINE B4 -19 146 2 1 1093 818 306 46 14 chr15 66624453 66624670 -36870304 - B4 SINE B4 -66 226 3 1 1093 1079 148 119 0 chr15 66625447 66625649 -36869325 + URR1A DNA MER1_type 1 226 0 1 1093 594 109 0 0 chr15 66626115 66626207 -36868767 + (GA)n Simple_repeat Simple_repeat 1 92 0 1 1093 25 0 0 0 chr15 66626274 66626299 -36868675 + AT_rich Low_complexity Low_complexity 1 25 0 1 1093 327 25 0 0 chr15 66626442 66626482 -36868492 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1093 279 0 0 0 chr15 66626664 66626695 -36868279 + (TATG)n Simple_repeat Simple_repeat 1 31 0 1 1093 198 0 0 0 chr15 66630667 66630689 -36864285 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 1 1093 181 377 0 0 chr15 66630793 66630862 -36864112 + MIR SINE MIR 118 186 -76 1 1093 320 169 0 27 chr15 66632490 66632563 -36862411 + GA-rich Low_complexity Low_complexity 4 74 0 1 1093 281 283 43 0 chr15 66634262 66634354 -36860620 - Tigger5 DNA MER2_type -20 2386 2291 1 1093 533 344 36 14 chr15 66634339 66634560 -36860414 - Tigger5 DNA MER2_type -2153 253 28 1 1093 231 273 39 0 chr15 66634708 66634785 -36860189 + Lx9 LINE L1 7391 7470 -174 1 1093 212 277 11 0 chr15 66635252 66635346 -36859628 + GA-rich Low_complexity Low_complexity 4 98 0 1 1093 187 167 20 59 chr15 66635958 66636009 -36858965 + MIR SINE MIR 117 165 -97 1 1093 196 171 29 0 chr15 66637052 66637087 -36857887 - MIRb SINE MIR -211 57 22 1 1093 372 280 24 0 chr15 66637425 66637522 -36857452 - PB1D10 SINE Alu -18 109 1 1 1093 274 197 33 0 chr15 66637975 66638036 -36856938 + MIR SINE MIR 73 135 -73 1 1093 267 240 187 0 chr15 66638483 66638558 -36856416 - RMER30 DNA MER1_type -5 197 109 1 1093 349 310 83 50 chr15 66638734 66638975 -36855999 - Tigger16a DNA Tigger -256 677 429 1 1093 582 15 0 0 chr15 66639736 66639803 -36855171 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 1093 1421 0 12 0 chr15 66639803 66639966 -36855008 + (GGGAGA)n Simple_repeat Simple_repeat 4 169 0 1 1093 716 255 80 73 chr15 66639967 66640365 -36854609 - L1MA4A LINE L1 -365 5938 5538 1 1093 180 204 136 0 chr15 66641201 66641245 -36853729 - MIRm SINE MIR -126 150 101 1 1093 383 296 0 0 chr15 66641898 66642006 -36852968 + (TGGA)n Simple_repeat Simple_repeat 2 109 0 1 1093 465 66 0 0 chr15 66642006 66642067 -36852907 + (GGAA)n Simple_repeat Simple_repeat 1 61 0 1 1093 360 261 11 0 chr15 66642067 66642155 -36852819 + (TGGA)n Simple_repeat Simple_repeat 4 92 0 1 1093 224 374 44 24 chr15 66642688 66642837 -36852137 - MIR SINE MIR -99 177 28 1 1093 243 365 48 14 chr15 66643130 66643277 -36851697 + MIRb SINE MIR 73 224 -44 1 1093 355 321 79 21 chr15 66643683 66643823 -36851151 - MIRc SINE MIR -38 230 83 1 1093 239 237 81 45 chr15 66645401 66645536 -36849438 - MIRb SINE MIR -110 158 27 1 1093 182 341 0 0 chr15 66646733 66646774 -36848200 - L2c LINE L2 -78 3309 3269 1 1093 216 0 0 0 chr15 66649544 66649568 -36845406 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1093 1188 55 7 0 chr15 66649568 66649714 -36845260 - B1_Mm SINE Alu 0 147 1 1 1093 1012 188 29 84 chr15 66650546 66650784 -36844190 - URR1B DNA MER1_type 0 225 1 1 1093 225 256 11 75 chr15 66651156 66651249 -36843725 - MIRm SINE MIR -88 188 102 1 1093 3465 18 10 0 chr15 66651313 66651705 -36843269 + MTA_Mm LTR MaLR 1 396 0 1 1093 372 119 0 0 chr15 66653488 66653547 -36841427 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1093 1446 190 23 23 chr15 66653548 66653849 -36841125 - RLTR16 LTR ERVK -103 402 102 1 1093 188 270 71 101 chr15 66654270 66654369 -36840605 + MIRb SINE MIR 115 210 -58 1 1093 247 190 0 0 chr15 66655092 66655150 -36839824 + CT-rich Low_complexity Low_complexity 2 59 0 1 1093 324 70 0 0 chr15 66656747 66656790 -36838184 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1093 981 206 36 36 chr15 66657241 66657463 -36837511 + URR1A DNA MER1_type 5 226 0 1 1093 234 331 48 32 chr15 66659019 66659144 -36835830 - MIR SINE MIR -56 152 26 1 1093 329 277 124 22 chr15 66660418 66660629 -36834345 + L1MC4a LINE L1 5679 5907 -1975 1 1093 315 0 0 0 chr15 66663605 66663640 -36831334 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1093 582 63 0 0 chr15 66663642 66663721 -36831253 + (GA)n Simple_repeat Simple_repeat 2 80 0 1 1093 351 202 0 0 chr15 66664684 66664768 -36830206 + GA-rich Low_complexity Low_complexity 2 85 0 1 1093 1207 146 35 10 chr15 66665408 66665609 -36829365 + URR1B DNA MER1_type 20 225 0 1 1093 631 246 30 81 chr15 66665609 66665668 -36829306 - CYRA11_Mm Unknown Y-chromosome -447 170 124 1 1093 215 248 65 94 chr15 66666757 66666895 -36828079 - MIRc SINE MIR -106 156 23 1 1093 3738 89 19 30 chr15 66667181 66667716 -36827258 - L1Md_F2 LINE L1 0 6582 6054 1 1093 251 287 88 15 chr15 66669215 66669339 -36825635 - MIR SINE MIR -93 183 49 1 1093 354 45 0 0 chr15 66669449 66669493 -36825481 + (TCCC)n Simple_repeat Simple_repeat 1 44 0 1 1093 767 301 49 41 chr15 66670355 66670598 -36824376 - B4 SINE B4 0 292 48 1 1093 587 266 5 31 chr15 66671372 66671521 -36823453 - B1F SINE Alu -1 148 5 1 1093 233 291 56 44 chr15 66672107 66672197 -36822777 - MLT1B LTR MaLR -76 289 199 1 1093 589 299 41 32 chr15 66673134 66673355 -36821619 - MLT1B LTR MaLR -151 239 17 1 1093 304 301 20 69 chr15 66673952 66674099 -36820875 + MIR SINE MIR 24 166 -96 1 1093 618 14 0 0 chr15 66674327 66674398 -36820576 + (TC)n Simple_repeat Simple_repeat 2 72 0 1 1093 447 19 0 0 chr15 66674398 66674449 -36820525 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1093 252 0 0 0 chr15 66674449 66674476 -36820498 + (GA)n Simple_repeat Simple_repeat 1 28 0 1 1093 207 300 0 14 chr15 66674483 66674554 -36820420 + CT-rich Low_complexity Low_complexity 1 70 0 1 1093 429 20 0 0 chr15 66674604 66674654 -36820320 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1093 264 234 0 0 chr15 66675108 66675155 -36819819 + MIRc SINE MIR 79 125 -143 1 1093 285 29 0 0 chr15 66675253 66675287 -36819687 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1093 225 0 0 0 chr15 66676513 66676538 -36818436 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 1093 1126 88 0 0 chr15 66676549 66676696 -36818278 - B1_Mus1 SINE Alu 0 148 2 1 1093 196 315 19 0 chr15 66678155 66678209 -36816765 - MIRm SINE MIR -3 273 219 2 1093 210 255 0 68 chr15 66678162 66678221 -36816753 - L2c LINE L2 -13 3374 3320 2 1093 201 39 0 0 chr15 66678997 66679023 -36815951 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1093 250 303 134 27 chr15 66679023 66679135 -36815839 - MER20 DNA MER1_type -5 214 91 2 1093 243 335 106 79 chr15 66679161 66679453 -36815521 - ORR1D1 LTR MaLR -28 346 47 2 1093 430 245 38 0 chr15 66679527 66679633 -36815341 + PB1D10 SINE Alu 1 110 -7 2 1093 765 44 26 0 chr15 66682605 66682719 -36812255 + (TC)n Simple_repeat Simple_repeat 1 117 0 2 1093 401 0 20 0 chr15 66682719 66682767 -36812207 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1093 293 286 48 97 chr15 66683038 66683162 -36811812 + MER5B DNA MER1_type 2 119 -59 2 1093 289 246 29 0 chr15 66683296 66683365 -36811609 - MER87 LTR ERV1 -71 470 400 2 1093 678 316 101 42 chr15 66684093 66684430 -36810544 + MLT1D LTR MaLR 149 505 0 2 1093 227 290 63 16 chr15 66686190 66686253 -36808721 + PB1D10 SINE Alu 5 70 -47 2 1093 252 316 10 69 chr15 66687003 66687105 -36807869 - RMER30 DNA MER1_type -7 195 100 2 1093 187 236 70 35 chr15 66688082 66688139 -36806835 + L3 LINE CR1 2084 2142 -2347 2 1093 808 262 90 118 chr15 66690523 66690749 -36804225 + MTE2a LTR MaLR 1 221 -158 2 1093 259 65 43 0 chr15 66690749 66690795 -36804179 + (CAAG)n Simple_repeat Simple_repeat 2 49 0 2 1093 808 262 90 118 chr15 66690795 66690958 -36804016 + MTE2a LTR MaLR 222 379 0 2 1093 765 203 14 7 chr15 66691241 66691380 -36803594 + B1_Mur4 SINE Alu 11 150 0 2 1093 323 263 68 39 chr15 66693111 66693214 -36801760 - L1M4b LINE L1 -5410 1924 1819 2 1093 324 231 8 15 chr15 66693218 66693350 -36801624 + (TG)n Simple_repeat Simple_repeat 1 131 0 2 1093 279 0 0 0 chr15 66693998 66694029 -36800945 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 2 1093 22 0 0 0 chr15 66694388 66694410 -36800564 + AT_rich Low_complexity Low_complexity 1 22 0 2 1093 963 262 121 42 chr15 66695560 66695831 -36799143 - MTE2b LTR MaLR -3 376 76 2 1093 1217 183 9 0 chr15 66695831 66696055 -36798919 - URR1A DNA MER1_type 0 226 1 2 1093 963 262 121 42 chr15 66696055 66696114 -36798860 - MTE2b LTR MaLR -304 75 20 2 1093 466 310 77 22 chr15 66697145 66697307 -36797667 + B3A SINE B2 2 174 -24 2 1093 717 23 0 0 chr15 66697314 66697401 -36797573 + (CA)n Simple_repeat Simple_repeat 2 88 0 2 1093 238 340 113 71 chr15 66697816 66697879 -36797095 + ORR1D2 LTR MaLR 77 137 -233 2 1093 2303 151 22 81 chr15 66697879 66698015 -36796959 + MTC LTR MaLR 1 120 -301 2 1093 1193 49 14 0 chr15 66698015 66698158 -36796816 - B1_Mus2 SINE Alu 0 147 3 2 1093 2303 151 22 81 chr15 66698158 66698468 -36796506 + MTC LTR MaLR 121 421 0 2 1093 238 340 113 71 chr15 66698468 66698686 -36796288 + ORR1D2 LTR MaLR 138 370 0 2 1093 1023 287 89 31 chr15 66699254 66699581 -36795393 - MTE2b LTR MaLR -30 349 4 2 1093 319 220 154 0 chr15 66701235 66701326 -36793648 - L1ME4a LINE L1 0 6124 6020 2 1093 548 278 30 0 chr15 66701555 66701688 -36793286 - B1F SINE Alu -12 137 1 2 1093 26 30 0 0 chr15 66701755 66701788 -36793186 + AT_rich Low_complexity Low_complexity 1 33 0 2 1093 1072 93 14 0 chr15 66702286 66702425 -36792549 + B1_Mus1 SINE Alu 2 142 -6 2 1093 414 0 0 0 chr15 66702427 66702473 -36792501 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 1093 208 335 190 6 chr15 66703250 66703424 -36791550 - L2 LINE L2 -949 2470 2265 2 1093 4487 225 46 39 chr15 66704784 66705866 -36789108 - ORR1D1-int LTR MaLR -428 1535 1 2 1093 1238 227 106 12 chr15 66705888 66706227 -36788747 - ORR1D1 LTR MaLR -3 371 1 2 1093 571 255 132 0 chr15 66706290 66706494 -36788480 + MT2A LTR ERVL 303 533 0 2 1093 207 335 109 109 chr15 66706788 66706999 -36787975 + L2a LINE L2 3212 3422 -4 2 1093 229 338 24 24 chr15 66707024 66707106 -36787868 + MIRc SINE MIR 40 121 -147 2 1093 375 219 0 0 chr15 66708149 66708245 -36786729 + (TTCA)n Simple_repeat Simple_repeat 2 97 0 2 1093 315 71 0 0 chr15 66708685 66708727 -36786247 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1093 468 328 65 55 chr15 66708991 66709298 -36785676 - MLT1C LTR MaLR -108 359 50 2 1093 327 102 164 33 chr15 66709426 66709487 -36785487 - RMER15 LTR ERVL -156 419 351 2 1093 286 226 164 62 chr15 66709576 66709722 -36785252 - RMER15 LTR ERVL -414 161 1 2 1093 185 100 115 39 chr15 66710120 66710172 -36784802 - L4 LINE RTE -195 1834 1779 2 1093 656 257 78 32 chr15 66711307 66711520 -36783454 + B3A SINE B2 1 203 -13 2 1093 257 235 87 10 chr15 66711953 66712056 -36782918 - MIR3 SINE MIR -52 156 46 2 1093 221 303 0 13 chr15 66712492 66712569 -36782405 + (TCCA)n Simple_repeat Simple_repeat 2 77 0 2 1093 232 267 79 148 chr15 66712642 66712686 -36782288 - B2_Mm2 SINE B2 0 195 43 2 1093 547 302 13 7 chr15 66712686 66712836 -36782138 - RSINE1 SINE B4 0 165 15 2 1093 181 207 0 0 chr15 66714200 66714229 -36780745 + MIRm SINE MIR 229 257 -19 2 1093 318 339 73 47 chr15 66714302 66714494 -36780480 + MIR SINE MIR 66 262 0 2 1093 21 0 0 0 chr15 66715102 66715123 -36779851 + AT_rich Low_complexity Low_complexity 1 21 0 2 1094 1796 202 112 14 chr15 66715723 66716089 -36778885 - MTD LTR MaLR -5 414 13 2 1094 355 301 117 37 chr15 66716248 66716410 -36778564 + MLT1B LTR MaLR 176 350 -40 2 1094 227 336 7 35 chr15 66716695 66716840 -36778134 + CT-rich Low_complexity Low_complexity 5 145 0 2 1094 204 97 0 0 chr15 66718214 66718245 -36776729 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 2 1094 3083 46 20 13 chr15 66718264 66718657 -36776317 + MTA_Mm LTR MaLR 1 396 0 2 1094 307 183 167 0 chr15 66718657 66718716 -36776258 - B4 SINE B4 -20 272 204 2 1094 1558 271 16 11 chr15 66718716 66719085 -36775889 + MTE2b LTR MaLR 1 371 -8 2 1094 890 250 18 49 chr15 66719090 66719313 -36775661 - B4 SINE B4 -76 216 1 2 1094 207 244 0 0 chr15 66719315 66719360 -36775614 - L2c LINE L2 -1 3386 3342 2 1094 327 25 0 0 chr15 66720379 66720419 -36774555 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1094 273 238 24 24 chr15 66720449 66720531 -36774443 - MIR SINE MIR -133 129 48 2 1094 230 258 113 0 chr15 66721389 66721451 -36773523 - MLT1J LTR MaLR -176 336 268 2 1094 746 127 0 8 chr15 66721454 66721581 -36773393 + (TC)n Simple_repeat Simple_repeat 1 126 0 2 1094 2034 114 0 14 chr15 66721598 66721891 -36773083 + Lx3A LINE L1 6670 6958 -23 2 1094 317 214 143 77 chr15 66725333 66725424 -36769550 - MIRc SINE MIR -140 128 32 2 1094 360 217 109 0 chr15 66726643 66726735 -36768239 + MER33 DNA MER1_type 199 300 -24 2 1094 453 335 6 6 chr15 66727186 66727232 -36767742 + (ATG)n Simple_repeat Simple_repeat 1 46 0 2 1094 294 95 0 0 chr15 66727232 66727274 -36767700 + (CTG)n Simple_repeat Simple_repeat 1 42 0 2 1094 453 335 6 6 chr15 66727274 66727401 -36767573 + (ATG)n Simple_repeat Simple_repeat 2 129 0 2 1094 261 286 0 14 chr15 66727456 66727527 -36767447 + CT-rich Low_complexity Low_complexity 3 72 0 2 1094 471 35 0 0 chr15 66728875 66728932 -36766042 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 1094 748 226 0 7 chr15 66729505 66729643 -36765331 + ID_B1 SINE B4 81 217 -7 2 1094 302 45 0 22 chr15 66729647 66729692 -36765282 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 2 1094 510 172 0 0 chr15 66729915 66730014 -36764960 + (TG)n Simple_repeat Simple_repeat 2 100 0 2 1094 783 148 8 0 chr15 66730376 66730498 -36764476 - B1_Mus1 SINE Alu 0 148 26 2 1094 297 245 54 81 chr15 66730403 66730514 -36764460 - MT2B LTR ERVL -325 276 169 2 1094 287 238 88 48 chr15 66730720 66730824 -36764150 - PB1D10 SINE Alu -40 110 2 2 1094 227 333 46 37 chr15 66730824 66730874 -36764100 - B4 SINE B4 -205 87 37 2 1094 566 309 0 47 chr15 66733888 66734078 -36760896 + B3A SINE B2 1 181 -17 2 1094 331 211 143 11 chr15 66734080 66734171 -36760803 - L1MCa LINE L1 -4560 1948 1846 2 1094 187 266 166 41 chr15 66734251 66734396 -36760578 + MIRb SINE MIR 101 263 -5 2 1094 408 321 87 69 chr15 66734550 66734781 -36760193 - B4 SINE B4 -57 235 1 2 1094 221 250 167 26 chr15 66735550 66735628 -36759346 + L2b LINE L2 3287 3375 0 2 1094 305 257 147 10 chr15 66735679 66735781 -36759193 + L2b LINE L2 3250 3365 -10 2 1094 210 265 0 58 chr15 66735737 66735789 -36759185 + MIRb SINE MIR 219 267 -1 2 1094 345 27 39 51 chr15 66737382 66737460 -36757514 + (CAAAAA)n Simple_repeat Simple_repeat 3 79 0 2 1094 387 41 0 0 chr15 66737512 66737561 -36757413 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1094 183 80 0 0 chr15 66738762 66738787 -36756187 + (CTATA)n Simple_repeat Simple_repeat 1 25 0 2 1094 663 65 0 0 chr15 66740432 66740525 -36754449 + (GA)n Simple_repeat Simple_repeat 1 93 0 2 1094 241 326 130 22 chr15 66740927 66741065 -36753909 - Charlie8 DNA MER1_type -2240 188 36 2 1094 274 372 7 0 chr15 66742268 66742288 -36752686 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 1094 531 0 0 0 chr15 66742288 66742347 -36752627 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 1094 274 372 7 0 chr15 66742347 66742463 -36752511 + (CA)n Simple_repeat Simple_repeat 2 118 0 2 1094 235 220 51 0 chr15 66743473 66743532 -36751442 - L2a LINE L2 -2 3424 3363 2 1094 213 312 101 30 chr15 66744748 66744847 -36750127 + MIRc SINE MIR 69 174 -94 2 1094 207 259 47 0 chr15 66745189 66745274 -36749700 + (TAGA)n Simple_repeat Simple_repeat 1 89 0 2 1094 255 125 0 0 chr15 66745331 66745371 -36749603 + (TGGA)n Simple_repeat Simple_repeat 3 42 0 2 1094 330 107 0 0 chr15 66745456 66745512 -36749462 + (CATA)n Simple_repeat Simple_repeat 1 56 0 2 1094 285 29 0 0 chr15 66746268 66746302 -36748672 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2 1094 401 281 62 15 chr15 66746322 66746452 -36748522 - MER20 DNA MER1_type -83 136 1 3 1094 248 85 0 41 chr15 66747015 66747064 -36747910 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 3 1094 330 26 0 0 chr15 66747065 66747104 -36747870 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1094 209 277 110 76 chr15 66747353 66747594 -36747380 - MIR SINE MIR -8 260 8 3 1094 210 154 0 0 chr15 66747691 66747730 -36747244 + A-rich Low_complexity Low_complexity 1 39 0 3 1094 205 244 220 11 chr15 66747787 66747878 -36747096 - MIRb SINE MIR -82 186 77 3 1094 959 258 61 173 chr15 66747882 66747980 -36746994 - MTEa LTR MaLR 0 379 290 3 1094 764 214 26 52 chr15 66747980 66748172 -36746802 + B3A SINE B2 1 187 -11 3 1094 959 258 61 173 chr15 66748172 66748500 -36746474 - MTEa LTR MaLR -90 289 1 3 1094 200 61 0 57 chr15 66751604 66751639 -36743335 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 3 1094 351 303 75 46 chr15 66753915 66754154 -36740820 - MIRb SINE MIR -21 247 2 3 1094 216 135 0 0 chr15 66754462 66754499 -36740475 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1094 183 100 0 0 chr15 66754789 66754819 -36740155 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1094 425 332 181 4 chr15 66755054 66755335 -36739639 - RMER15 LTR ERVL -184 391 61 3 1094 901 291 15 44 chr15 66755906 66756176 -36738798 + B4 SINE B4 24 285 -7 3 1094 1982 105 28 3 chr15 66756265 66756552 -36738422 + L1_Mus4 LINE L1 6343 6636 0 3 1094 237 295 309 27 chr15 66756946 66757209 -36737765 + L1MA4 LINE L1 5589 5931 -369 3 1094 2935 81 39 0 chr15 66757211 66757595 -36737379 - MTB LTR MaLR 0 400 2 3 1094 295 258 40 119 chr15 66758045 66758146 -36736828 + PB1 SINE Alu 21 120 -7 3 1094 254 143 16 0 chr15 66758156 66758219 -36736755 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 3 1094 656 128 36 12 chr15 66758249 66758415 -36736559 + (TCTA)n Simple_repeat Simple_repeat 2 171 0 3 1094 304 297 179 26 chr15 66758514 66758704 -36736270 + Tigger15a DNA TcMar 108 326 -389 3 1094 789 200 6 48 chr15 66758972 66759140 -36735834 + B4A SINE B4 132 292 0 3 1094 291 130 0 0 chr15 66759402 66759448 -36735526 - ORR1D1 LTR MaLR -2 372 327 3 1094 662 274 61 6 chr15 66759540 66759705 -36735269 - B4 SINE B4 -24 268 95 3 1094 791 253 56 5 chr15 66759709 66759904 -36735070 - B3 SINE B2 -8 208 4 3 1094 456 214 0 12 chr15 66759911 66759996 -36734978 - B4 SINE B4 -206 86 3 3 1094 265 250 0 95 chr15 66760302 66760386 -36734588 + B4A SINE B4 209 284 -8 3 1094 353 285 110 7 chr15 66760604 66760749 -36734225 + Charlie5 DNA MER1_type 2462 2621 -3 3 1094 218 314 62 71 chr15 66762888 66763001 -36731973 + MIRb SINE MIR 42 153 -115 3 1094 676 276 222 17 chr15 66763253 66763599 -36731375 + MLT1C LTR MaLR 17 433 -34 3 1094 480 125 66 8 chr15 66763749 66763870 -36731104 + CT-rich Low_complexity Low_complexity 4 131 0 3 1094 512 287 13 40 chr15 66763895 66764044 -36730930 - ID_B1 SINE B4 -1 223 79 3 1094 1300 88 5 22 chr15 66764393 66764578 -36730396 + B2_Mm1a SINE B2 3 184 -9 3 1094 413 277 5 11 chr15 66764919 66765025 -36729949 + B1F SINE Alu 1 109 -11 3 1094 279 167 0 0 chr15 66765097 66765151 -36729823 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 1094 384 96 0 64 chr15 66765700 66765778 -36729196 - L1Md_F2 LINE L1 0 6582 6510 3 1094 310 300 11 7 chr15 66766126 66766406 -36728568 + GA-rich Low_complexity Low_complexity 1 281 0 3 1094 213 261 0 0 chr15 66768525 66768571 -36726403 + CT-rich Low_complexity Low_complexity 1 46 0 3 1094 329 217 253 0 chr15 66768571 66768654 -36726320 - B1F2 SINE Alu -3 146 43 3 1094 183 264 19 19 chr15 66768910 66768964 -36726010 + MIRb SINE MIR 56 109 -159 3 1094 316 284 18 27 chr15 66770802 66770914 -36724060 + MIR SINE MIR 33 143 -119 3 1094 278 385 35 44 chr15 66772485 66772713 -36722261 + MIR SINE MIR 18 243 -19 3 1094 284 294 94 22 chr15 66772723 66772904 -36722070 + L1ME1 LINE L1 5695 5888 -291 3 1094 659 263 124 29 chr15 66773105 66773379 -36721595 + Lx8 LINE L1 7164 7463 -10 3 1094 390 218 70 90 chr15 66775365 66775521 -36719453 - B4A SINE B4 -139 153 1 3 1094 185 245 113 0 chr15 66775660 66775713 -36719261 + L3 LINE CR1 791 849 -3640 3 1094 267 140 0 0 chr15 66777621 66777671 -36717303 + (TC)n Simple_repeat Simple_repeat 2 51 0 3 1094 288 0 0 0 chr15 66777671 66777703 -36717271 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1094 436 216 27 46 chr15 66778182 66778300 -36716674 + B1_Mur1 SINE Alu 32 144 -5 3 1094 317 299 10 49 chr15 66778652 66778754 -36716220 - PB1D10 SINE Alu -11 106 9 3 1094 325 331 60 48 chr15 66778666 66778768 -36716206 - ID_B1 SINE B4 -48 176 82 3 1094 243 0 0 0 chr15 66778768 66778795 -36716179 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1094 325 331 60 48 chr15 66778795 66778860 -36716114 - ID SINE ID -143 81 8 3 1094 540 265 26 0 chr15 66778797 66778914 -36716060 - B1_Mur1 SINE Alu -29 120 1 3 1094 2342 115 50 42 chr15 66779011 66779392 -36715582 + ORR1C2 LTR MaLR 1 384 0 3 1094 317 219 13 27 chr15 66779392 66779467 -36715507 + ORR1C2-int LTR MaLR 1 74 -1296 3 1094 318 319 67 17 chr15 66779468 66779720 -36715254 + L1MB8 LINE L1 5774 6046 -138 3 1094 1097 103 0 4 chr15 66780227 66780483 -36714491 + (GGGAA)n Simple_repeat Simple_repeat 1 255 0 3 1094 214 230 13 26 chr15 66780499 66780575 -36714399 + GA-rich Low_complexity Low_complexity 1 75 0 3 1094 1444 179 106 50 chr15 66780845 66781203 -36713771 + ORR1C2 LTR MaLR 4 381 -3 3 1094 432 55 0 0 chr15 66781203 66781258 -36713716 + (CATA)n Simple_repeat Simple_repeat 4 58 0 3 1094 207 231 76 133 chr15 66782219 66782324 -36712650 + MIRm SINE MIR 87 185 -91 3 1094 369 208 0 53 chr15 66782844 66782920 -36712054 - ID4 SINE ID -11 72 1 3 1094 388 239 84 32 chr15 66782958 66783053 -36711921 + PB1D10 SINE Alu 9 108 -9 3 1094 1053 254 47 121 chr15 66783856 66784286 -36710688 - MTD LTR MaLR -21 398 1 3 1094 995 109 0 0 chr15 66785668 66785815 -36709159 + URR1A DNA MER1_type 79 225 -1 3 1094 409 307 24 18 chr15 66785815 66785837 -36709137 - CYRA11_Mm Unknown Y-chromosome -298 319 150 3 1094 271 299 46 23 chr15 66787254 66787384 -36707590 + L1MB4 LINE L1 5869 6001 -170 3 1094 309 215 63 0 chr15 66787402 66787481 -36707493 + L1MB4 LINE L1 6096 6179 -1 3 1094 246 200 55 0 chr15 66789335 66789390 -36705584 - MIR SINE MIR -77 131 74 3 1094 438 20 0 0 chr15 66791799 66791850 -36703124 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1094 288 0 0 0 chr15 66791850 66791881 -36703093 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1094 343 276 148 8 chr15 66793733 66793861 -36701113 - MER20 DNA MER1_type -66 153 8 3 1094 369 0 0 0 chr15 66796210 66796251 -36698723 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1094 415 224 56 9 chr15 66796299 66796407 -36698567 - PB1D10 SINE Alu 0 117 5 3 1094 267 347 56 8 chr15 66798093 66798218 -36696756 - MIR SINE MIR -21 241 111 3 1094 295 322 84 39 chr15 66801936 66802077 -36692897 + MER5B DNA MER1_type 5 152 -26 3 1094 367 314 0 24 chr15 66802077 66802204 -36692770 + RSINE1 SINE B4 2 125 -40 3 1094 188 216 0 0 chr15 66802775 66802812 -36692162 - L2b LINE L2 -6 3369 3333 3 1094 356 235 74 52 chr15 66803072 66803189 -36691785 + PB1D10 SINE Alu 1 120 0 3 1094 282 348 108 38 chr15 66804064 66804276 -36690698 - MLT1C LTR MaLR 0 467 241 3 1094 317 266 0 37 chr15 66804495 66804577 -36690397 - RSINE1 SINE B4 -44 121 43 3 1094 691 282 41 44 chr15 66804730 66805001 -36689973 + MT2A LTR ERVL 173 442 -91 3 1094 195 72 23 45 chr15 66805368 66805412 -36689562 + (CACCC)n Simple_repeat Simple_repeat 4 46 0 3 1094 309 301 58 128 chr15 66805529 66805841 -36689133 + MLT1I LTR MaLR 25 314 -97 3 1094 514 245 0 0 chr15 66805895 66805997 -36688977 + B1F SINE Alu 1 102 -47 3 1094 231 232 0 0 chr15 66806016 66806072 -36688902 + CT-rich Low_complexity Low_complexity 3 58 0 3 1094 1318 159 68 0 chr15 66806075 66806295 -36688679 - Lx5 LINE L1 -1 7049 6815 3 1094 491 0 17 0 chr15 66806300 66806359 -36688615 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 3 1094 359 256 24 12 chr15 66807430 66807600 -36687374 + GA-rich Low_complexity Low_complexity 3 174 0 3 1094 306 0 0 0 chr15 66807916 66807950 -36687024 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1094 471 35 0 0 chr15 66808141 66808198 -36686776 + (CTATT)n Simple_repeat Simple_repeat 1 57 0 3 1094 552 238 118 59 chr15 66808221 66808373 -36686601 - B4 SINE B4 -128 164 4 3 1094 281 261 11 11 chr15 66809296 66809385 -36685589 + (CATATA)n Simple_repeat Simple_repeat 5 93 0 3 1094 22 0 0 0 chr15 66809456 66809478 -36685496 + AT_rich Low_complexity Low_complexity 1 22 0 3 1094 33 25 0 0 chr15 66809527 66809567 -36685407 + AT_rich Low_complexity Low_complexity 1 40 0 3 1094 1266 41 0 0 chr15 66809649 66809795 -36685179 - B1_Mus2 SINE Alu 0 147 2 3 1094 584 253 199 21 chr15 66809802 66809988 -36684986 - ID_B1 SINE B4 0 224 6 3 1094 291 324 56 19 chr15 66811777 66811884 -36683090 - MIR SINE MIR -112 150 40 3 1094 1989 198 101 11 chr15 66812703 66813178 -36681796 - Lx9 LINE L1 -6 7638 7121 3 1094 257 317 38 9 chr15 66813989 66814094 -36680880 + PB1D7 SINE Alu 3 110 -10 3 1094 1098 247 28 114 chr15 66815323 66815745 -36679229 + MTE2a LTR MaLR 2 403 -16 3 1094 922 231 90 11 chr15 66816785 66816973 -36678001 + B4 SINE B4 90 292 0 3 1094 180 77 0 0 chr15 66816995 66817021 -36677953 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1094 2678 155 131 19 chr15 66817303 66817630 -36677344 + RMER4B LTR ERVK 1 342 -243 3 1094 1048 124 11 0 chr15 66817630 66817808 -36677166 + (GAA)n Simple_repeat Simple_repeat 1 180 0 3 1094 324 0 0 0 chr15 66817809 66817845 -36677129 + (TTG)n Simple_repeat Simple_repeat 2 37 0 4 1094 2678 155 131 19 chr15 66817845 66818041 -36676933 + RMER4B LTR ERVK 343 585 0 3 1094 844 264 114 17 chr15 66818133 66818479 -36676495 - MLT1B LTR MaLR -10 457 1 4 1094 2185 199 22 7 chr15 66818616 66819021 -36675953 + MTD LTR MaLR 1 411 -8 4 1094 452 380 89 17 chr15 66819755 66820057 -36674917 + MLT1J LTR MaLR 142 465 -47 4 1094 427 259 76 41 chr15 66820567 66820712 -36674262 + B4A SINE B4 78 227 -65 4 1094 526 212 115 0 chr15 66820595 66820708 -36674266 + B1F SINE Alu 21 146 -3 4 1094 263 281 98 78 chr15 66820708 66820783 -36674191 - YREP_Mm Unknown Unknown -1512 295 104 4 1094 524 299 172 5 chr15 66821282 66821480 -36673494 - B4A SINE B4 -23 269 39 4 1094 415 287 21 0 chr15 66821778 66821872 -36673102 - PB1D10 SINE Alu -21 96 1 4 1094 296 302 136 17 chr15 66821872 66821903 -36673071 - B4 SINE B4 -200 92 48 4 1094 734 191 160 21 chr15 66822506 66822693 -36672281 - B3 SINE B2 -1 215 3 4 1094 598 297 13 0 chr15 66822879 66823034 -36671940 - ID_B1 SINE B4 -40 184 28 4 1094 244 277 101 0 chr15 66823336 66823455 -36671519 - LTR33A LTR ERVL -2 518 388 4 1094 264 286 18 0 chr15 66823649 66823705 -36671269 - ID4 SINE ID -19 64 8 4 1094 316 301 17 34 chr15 66823716 66823833 -36671141 - L1MC5 LINE L1 -142 7819 7705 4 1094 410 229 10 75 chr15 66823839 66823965 -36671009 + B4 SINE B4 3 115 -50 4 1094 302 311 112 101 chr15 66824598 66824757 -36670217 - L1MC4 LINE L1 -2919 3295 3145 4 1094 1202 201 9 0 chr15 66824757 66824981 -36669993 + URR1A DNA MER1_type 1 226 0 4 1094 302 311 112 101 chr15 66824981 66825089 -36669885 - L1MC4 LINE L1 -3070 3144 3025 4 1094 254 290 47 115 chr15 66825352 66825500 -36669474 + MLT1A1 LTR MaLR 271 408 0 4 1094 668 233 149 31 chr15 66825542 66825737 -36669237 - ID_B1 SINE B4 -2 222 5 4 1094 550 357 104 13 chr15 66825748 66826066 -36668908 - L1MC4 LINE L1 -3319 2895 2549 4 1094 245 306 0 0 chr15 66826067 66826116 -36668858 - ID_B1 SINE B4 -95 129 81 4 1094 266 277 121 42 chr15 66826485 66826651 -36668323 - L1MC4 LINE L1 -4465 1750 1572 4 1094 363 301 128 17 chr15 66826657 66826836 -36668138 - HAL1b LINE L1 -883 1126 928 4 1094 208 373 60 60 chr15 66827326 66827477 -36667497 + L2b LINE L2 3225 3375 0 4 1094 181 329 40 40 chr15 66828204 66828280 -36666694 + MIR SINE MIR 41 116 -92 4 1094 236 349 12 51 chr15 66828958 66829091 -36665883 + L2c LINE L2 3230 3370 -17 4 1094 413 271 97 19 chr15 66829374 66829528 -36665446 + MIR SINE MIR 71 236 -26 4 1094 667 330 131 5 chr15 66830878 66831298 -36663676 - L1MA5A LINE L1 -356 5941 5469 4 1094 39924 13 12 16 chr15 66831335 66832984 -36661990 - L1Md_A LINE L1 0 6582 4925 4 1094 226 183 46 77 chr15 66832984 66833049 -36661925 + RMER20A LTR ERVK 186 248 -268 4 1094 39924 13 12 16 chr15 66833049 66837730 -36657244 - L1Md_A LINE L1 0 4924 214 4 1094 1400 161 5 0 chr15 66837735 66837959 -36657015 + URR1B DNA MER1_type 1 225 0 4 1094 247 256 193 21 chr15 66838519 66838659 -36656315 - RMER21B LTR ERV1 -85 757 594 4 1094 1049 147 144 1 chr15 66838881 66839114 -36655860 + ORR1B1 LTR MaLR 106 392 -2 4 1094 993 275 80 75 chr15 66839195 66839345 -36655629 - MTEb LTR MaLR -1 378 230 4 1094 2280 152 24 5 chr15 66839345 66839716 -36655258 - ORR1C1 LTR MaLR 0 378 1 4 1094 993 275 80 75 chr15 66839716 66839938 -36655036 - MTEb LTR MaLR -150 229 4 4 1094 231 114 0 0 chr15 66840947 66840982 -36653992 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1094 703 115 143 23 chr15 66840982 66841115 -36653859 + B1_Mur4 SINE Alu 2 150 0 4 1094 323 154 0 0 chr15 66841480 66841532 -36653442 - MTE2a LTR MaLR -327 52 1 4 1094 545 304 76 6 chr15 66841534 66841706 -36653268 + ID_B1 SINE B4 15 198 -26 4 1094 226 346 12 12 chr15 66841743 66841825 -36653149 - MLT1I LTR MaLR -4 407 326 4 1094 707 100 0 9 chr15 66841952 66842063 -36652911 + (GGGA)n Simple_repeat Simple_repeat 3 112 0 4 1094 755 266 48 0 chr15 66842453 66842660 -36652314 + ID_B1 SINE B4 2 218 -6 4 1094 380 242 7 0 chr15 66842671 66842824 -36652150 + GA-rich Low_complexity Low_complexity 4 157 0 4 1094 570 339 127 10 chr15 66844529 66844836 -36650138 + MLT1B LTR MaLR 46 388 -2 4 1094 772 270 133 17 chr15 66844879 66845120 -36649854 - B4A SINE B4 0 292 24 4 1094 414 323 0 10 chr15 66845674 66845774 -36649200 - PB1D10 SINE Alu -16 101 3 4 1095 262 263 117 50 chr15 66846955 66847075 -36647899 - MLT1A LTR MaLR -139 235 108 4 1095 244 276 60 65 chr15 66847185 66847309 -36647665 - L2a LINE L2 -339 3087 2963 4 1095 1725 218 35 41 chr15 66847427 66847795 -36647179 - ORR1C1 LTR MaLR -12 366 1 4 1095 658 258 41 98 chr15 66847795 66848038 -36646936 - MER44B DNA MER2_type -110 440 212 4 1095 780 329 34 17 chr15 66848098 66848336 -36646638 - MER44B DNA MER2_type -309 241 1 4 1095 808 279 118 12 chr15 66848378 66848648 -36646326 - MLT1B LTR MaLR -102 288 1 4 1095 182 340 41 41 chr15 66848851 66848949 -36646025 - L2a LINE L2 -755 2664 2567 4 1095 184 214 325 25 chr15 66849335 66849455 -36645519 + MIRb SINE MIR 64 219 -49 4 1095 318 217 208 36 chr15 66850026 66850236 -36644738 + MTE2b LTR MaLR 142 379 0 4 1095 213 290 0 16 chr15 66850347 66850410 -36644564 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 1095 311 305 23 15 chr15 66850506 66850636 -36644338 - B4A SINE B4 -161 131 1 4 1095 274 296 51 0 chr15 66851698 66851796 -36643178 + PB1D10 SINE Alu 5 107 -10 4 1095 546 318 53 109 chr15 66851836 66852175 -36642799 + MTD LTR MaLR 6 325 -82 4 1095 4151 176 50 25 chr15 66852594 66853427 -36641547 + RLTR25B LTR ERVK 1 854 -174 4 1095 980 192 7 123 chr15 66853682 66853969 -36641005 + RLTR25A LTR ERVK 766 1103 0 4 1095 899 253 95 147 chr15 66854247 66854636 -36640338 - MTE2b LTR MaLR 0 379 11 4 1095 314 301 95 19 chr15 66855121 66855226 -36639748 + RMER15 LTR ERVL 325 437 -138 4 1095 216 0 0 0 chr15 66855227 66855251 -36639723 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1095 381 221 208 28 chr15 66855290 66855434 -36639540 + RMER15 LTR ERVL 404 573 -2 4 1095 1996 149 18 114 chr15 66855498 66855938 -36639036 - RMER10B LTR ERVL 0 398 1 4 1095 279 0 0 0 chr15 66856362 66856393 -36638581 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 1095 270 0 0 0 chr15 66856393 66856422 -36638552 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1095 216 0 0 0 chr15 66856422 66856445 -36638529 + (GA)n Simple_repeat Simple_repeat 1 24 0 4 1095 258 95 0 0 chr15 66856468 66856510 -36638464 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1095 183 161 0 0 chr15 66857254 66857285 -36637689 - MER5A DNA MER1_type -121 68 38 4 1095 806 286 20 15 chr15 66857928 66858123 -36636851 + B3A SINE B2 1 196 -2 4 1095 1044 231 5 5 chr15 66858146 66858350 -36636624 + B3 SINE B2 2 205 -11 4 1095 467 288 112 0 chr15 66858425 66858595 -36636379 + Lx7 LINE L1 6829 7017 -679 4 1095 699 318 60 0 chr15 66858618 66858819 -36636155 + Lx8 LINE L1 7116 7328 -145 4 1095 261 0 0 0 chr15 66858822 66858851 -36636123 + (GA)n Simple_repeat Simple_repeat 1 29 0 4 1095 769 264 151 47 chr15 66858957 66859097 -36635877 - MTEa LTR MaLR 0 379 200 4 1095 504 0 0 0 chr15 66859097 66859153 -36635821 + (GA)n Simple_repeat Simple_repeat 1 56 0 4 1095 769 264 151 47 chr15 66859153 66859310 -36635664 - MTEa LTR MaLR -180 199 51 4 1095 1119 282 32 115 chr15 66859331 66859731 -36635243 - MTE2a LTR MaLR -4 375 9 4 1095 343 137 0 0 chr15 66859746 66859797 -36635177 - MTEa LTR MaLR -325 54 4 4 1095 521 342 98 16 chr15 66860117 66860361 -36634613 - MLT1C LTR MaLR -197 270 7 4 1095 321 381 60 12 chr15 66860742 66860992 -36633982 + MLT1K LTR MaLR 316 577 -18 4 1095 432 0 0 0 chr15 66861404 66861452 -36633522 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 1095 426 329 13 20 chr15 66862140 66862289 -36632685 + RSINE1 SINE B4 3 150 -15 4 1095 195 250 48 32 chr15 66862372 66862434 -36632540 + MIR SINE MIR 58 120 -88 4 1095 23 0 0 0 chr15 66862712 66862735 -36632239 + AT_rich Low_complexity Low_complexity 1 23 0 4 1095 309 294 12 12 chr15 66862971 66863057 -36631917 + MLT1D LTR MaLR 365 450 -55 4 1095 194 290 110 70 chr15 66863705 66863805 -36631169 - L2c LINE L2 -19 3407 3304 4 1095 1218 256 40 40 chr15 66864199 66864569 -36630405 - ORR1D2 LTR MaLR 0 370 1 4 1095 2899 46 0 6 chr15 66864738 66865086 -36629888 + ORR1A1 LTR MaLR 1 346 0 4 1095 326 305 31 0 chr15 66865086 66865214 -36629760 - L2c LINE L2 -321 3066 2935 4 1095 1482 138 4 4 chr15 66867164 66867390 -36627584 - URR1A DNA MER1_type 0 226 1 4 1095 372 352 0 24 chr15 66867879 66868045 -36626929 + GA-rich Low_complexity Low_complexity 2 163 0 4 1095 266 159 36 24 chr15 66868861 66868945 -36626029 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 4 1095 510 282 84 24 chr15 66869244 66869411 -36625563 + MLT1D LTR MaLR 22 198 -307 4 1095 358 321 77 15 chr15 66869431 66869627 -36625347 + MLT1D LTR MaLR 265 472 -33 4 1095 1015 218 47 19 chr15 66869830 66870045 -36624929 - ID_B1 SINE B4 -3 221 1 4 1095 191 278 97 0 chr15 66871455 66871527 -36623447 - MIRm SINE MIR -91 185 107 4 1095 309 310 13 47 chr15 66872526 66872664 -36622310 + B4A SINE B4 1 131 -34 4 1095 236 307 105 74 chr15 66872664 66872688 -36622286 + B3A SINE B2 1 167 -31 4 1095 252 0 0 0 chr15 66872690 66872718 -36622256 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1095 373 296 0 0 chr15 66872737 66872818 -36622156 + ID_B1 SINE B4 106 186 -38 4 1095 259 282 64 0 chr15 66872748 66872826 -36622148 + B1_Mm SINE Alu 36 118 -29 4 1095 332 331 44 22 chr15 66873008 66873144 -36621830 + L2a LINE L2 3288 3426 0 4 1095 441 0 0 0 chr15 66874153 66874202 -36620772 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1095 372 119 0 0 chr15 66874459 66874518 -36620456 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1095 2440 92 3 0 chr15 66874541 66874867 -36620107 - ORR1A2 LTR MaLR 0 327 1 4 1095 395 321 129 67 chr15 66874867 66875076 -36619898 - B4 SINE B4 -29 263 42 5 1095 898 280 37 30 chr15 66875253 66875522 -36619452 - B4A SINE B4 -18 274 4 5 1095 546 189 36 0 chr15 66875604 66875715 -36619259 - URR1B DNA MER1_type 0 225 111 5 1095 183 364 0 0 chr15 66875847 66875913 -36619061 + MIR SINE MIR 49 114 -148 5 1095 816 223 32 59 chr15 66876350 66876569 -36618405 + MER58B DNA MER1_type 29 241 -100 5 1095 336 187 39 39 chr15 66876684 66876762 -36618212 - MTEa LTR MaLR -24 355 278 5 1095 218 337 42 10 chr15 66877315 66877411 -36617563 + MER91B DNA Tip100 7 105 -85 5 1095 187 107 0 35 chr15 66877508 66877537 -36617437 + L2c LINE L2 3341 3368 -19 5 1095 252 0 0 0 chr15 66878639 66878667 -36616307 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1095 211 308 49 37 chr15 66879324 66879405 -36615569 - MIR SINE MIR -98 164 83 5 1095 333 68 0 0 chr15 66879533 66879577 -36615397 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1095 939 113 35 0 chr15 66880827 66880968 -36614006 - B1_Mus2 SINE Alu 0 147 2 5 1095 949 116 44 25 chr15 66880985 66881144 -36613830 - URR1B DNA MER1_type -19 206 45 5 1095 298 267 56 19 chr15 66881216 66881323 -36613651 - MLT1A LTR MaLR -2 406 296 5 1095 2479 87 12 0 chr15 66881389 66881712 -36613262 + ORR1A2 LTR MaLR 1 327 0 5 1095 31053 25 0 0 chr15 66881719 66885341 -36609633 + L1Md_T LINE L1 1965 5586 -297 5 1095 8123 55 0 4 chr15 66885341 66886341 -36608633 + L1Md_T LINE L1 5587 6582 0 5 1095 339 280 68 37 chr15 66886362 66886378 -36608596 - MLT1A LTR MaLR -206 168 155 5 1095 180 0 0 0 chr15 66886378 66886398 -36608576 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5 1095 339 280 68 37 chr15 66886398 66886544 -36608430 - MLT1A LTR MaLR -220 154 1 5 1095 811 289 80 50 chr15 66886854 66887156 -36607818 - ORR1E LTR MaLR -41 318 8 5 1095 351 274 199 30 chr15 66887439 66887643 -36607331 + MLT1A0 LTR MaLR 127 364 -1 5 1095 211 320 61 30 chr15 66887775 66887907 -36607067 + MIRc SINE MIR 31 166 -102 5 1095 253 261 138 0 chr15 66888484 66888549 -36606425 + MTEb LTR MaLR 292 365 -14 5 1095 1252 257 125 3 chr15 66888586 66888914 -36606060 - MTE2b LTR MaLR -8 371 4 5 1095 407 345 61 61 chr15 66888917 66889130 -36605844 - MLT1F1 LTR MaLR -354 215 3 5 1095 874 134 62 34 chr15 66889308 66889338 -36605636 - B2_Mm2 SINE B2 -7 188 163 5 1095 204 40 0 0 chr15 66889338 66889363 -36605611 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 5 1095 874 134 62 34 chr15 66889363 66889510 -36605464 - B2_Mm2 SINE B2 -33 162 6 5 1095 928 98 0 15 chr15 66889507 66889642 -36605332 + B1_Mur4 SINE Alu 18 150 0 5 1095 501 62 0 0 chr15 66889648 66889713 -36605261 + (GA)n Simple_repeat Simple_repeat 1 65 0 5 1095 306 276 118 31 chr15 66890281 66890408 -36604566 + MLT1A1 LTR MaLR 268 405 -3 5 1095 610 264 56 61 chr15 66890589 66890787 -36604187 + RMER30 DNA MER1_type 5 201 -1 5 1095 189 171 0 0 chr15 66891027 66891062 -36603912 + (TATG)n Simple_repeat Simple_repeat 4 38 0 5 1095 294 29 0 0 chr15 66891066 66891101 -36603873 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1095 327 49 0 0 chr15 66891150 66891191 -36603783 + (TTG)n Simple_repeat Simple_repeat 2 42 0 5 1095 462 18 0 0 chr15 66891405 66891460 -36603514 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 1095 851 297 24 59 chr15 66891466 66891720 -36603254 - B4 SINE B4 -20 272 28 5 1095 1072 110 0 0 chr15 66891735 66891881 -36603093 - B1_Mus1 SINE Alu -1 147 2 5 1095 435 19 0 0 chr15 66892466 66892518 -36602456 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 1095 306 73 0 0 chr15 66892520 66892561 -36602413 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 5 1095 228 236 67 117 chr15 66892770 66892850 -36602124 - MT2C_Mm LTR ERVL -200 275 205 5 1095 647 274 20 64 chr15 66892850 66893053 -36601921 - B3A SINE B2 -4 194 1 5 1095 228 236 67 117 chr15 66893053 66893092 -36601882 - MT2C_Mm LTR ERVL -271 204 164 5 1095 228 336 104 17 chr15 66893840 66893955 -36601019 - MIRb SINE MIR -106 162 38 5 1095 201 347 74 17 chr15 66894150 66894326 -36600648 + MIR SINE MIR 13 198 -64 5 1095 255 316 86 81 chr15 66894358 66894592 -36600382 + L1MDa LINE L1 907 1141 -5492 5 1095 228 324 0 0 chr15 66894678 66894746 -36600228 + B4 SINE B4 2 69 -223 5 1095 231 188 0 0 chr15 66894876 66894924 -36600050 + (CAG)n Simple_repeat Simple_repeat 3 50 0 5 1095 952 139 0 14 chr15 66895062 66895208 -36599766 + B1_Mus1 SINE Alu 5 148 0 5 1095 24 0 0 0 chr15 66895208 66895232 -36599742 + AT_rich Low_complexity Low_complexity 1 24 0 5 1095 245 247 81 20 chr15 66895271 66895370 -36599604 + L1MDa LINE L1 1273 1377 -5256 5 1095 311 221 8 24 chr15 66895383 66895508 -36599466 + (TG)n Simple_repeat Simple_repeat 1 123 0 5 1095 795 279 36 82 chr15 66895508 66895813 -36599161 - B4A SINE B4 0 292 2 5 1095 870 248 196 16 chr15 66897537 66897849 -36597125 + ORR1D2 LTR MaLR 1 368 -2 5 1095 3136 72 2 12 chr15 66898038 66898449 -36596525 - MTB_Mm LTR MaLR 0 407 1 5 1095 288 343 53 45 chr15 66898449 66898686 -36596288 - MLT1H LTR MaLR -303 246 8 5 1095 1103 106 4 13 chr15 66898981 66899211 -36595763 + (GAA)n Simple_repeat Simple_repeat 1 227 0 5 1095 253 47 0 44 chr15 66899568 66899613 -36595361 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 5 1095 2056 89 11 116 chr15 66899996 66900350 -36594624 - ORR1A2 LTR MaLR -10 317 1 5 1095 263 321 67 18 chr15 66900578 66900743 -36594231 - L2b LINE L2 -230 3145 2973 5 1095 224 167 21 0 chr15 66901195 66901243 -36593731 + (CATAC)n Simple_repeat Simple_repeat 2 50 0 5 1095 1696 214 74 72 chr15 66902030 66902448 -36592526 - MTD LTR MaLR 0 419 1 5 1095 880 274 17 0 chr15 66903730 66903905 -36591069 - B3 SINE B2 -2 214 37 5 1095 462 304 25 126 chr15 66903905 66903979 -36590995 - RMER10A LTR ERVL 0 442 388 5 1095 1098 62 21 7 chr15 66903979 66904124 -36590850 - B1_Mm SINE Alu 0 147 1 5 1095 462 304 25 126 chr15 66904124 66904406 -36590568 - RMER10A LTR ERVL -55 387 122 5 1095 289 253 64 75 chr15 66904413 66904507 -36590467 - B3 SINE B2 -123 93 1 5 1095 271 167 42 0 chr15 66904664 66904712 -36590262 + MTE2b LTR MaLR 1 50 -329 5 1095 363 259 26 65 chr15 66904724 66904877 -36590097 - L1M3 LINE L1 -3623 2517 2371 5 1095 242 337 0 23 chr15 66904877 66904965 -36590009 - PB1D10 SINE Alu 0 117 32 5 1095 1450 199 54 70 chr15 66905177 66905382 -36589592 - ORR1C2 LTR MaLR -2 382 175 5 1095 243 0 0 0 chr15 66905382 66905409 -36589565 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1095 396 0 0 0 chr15 66905409 66905452 -36589522 + (GA)n Simple_repeat Simple_repeat 2 45 0 5 1095 1450 199 54 70 chr15 66905452 66905633 -36589341 - ORR1C2 LTR MaLR -210 174 2 5 1095 188 294 82 0 chr15 66905730 66905815 -36589159 - MIRc SINE MIR -176 92 1 5 1095 243 0 0 0 chr15 66906030 66906057 -36588917 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1095 1989 178 87 8 chr15 66906186 66906370 -36588604 + MTC LTR MaLR 1 196 -225 5 1095 303 28 0 0 chr15 66906370 66906406 -36588568 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 5 1095 1989 178 87 8 chr15 66906406 66906611 -36588363 + MTC LTR MaLR 197 420 -1 5 1095 878 273 16 115 chr15 66906645 66906968 -36588006 - B4 SINE B4 0 292 2 5 1095 263 370 102 46 chr15 66907000 66907283 -36587691 - MLT1E1A LTR MaLR -38 642 344 5 1095 746 288 0 12 chr15 66907748 66907913 -36587061 - RSINE1 SINE B4 0 165 3 5 1095 1201 41 0 26 chr15 66909009 66909160 -36585814 + B1_Mus1 SINE Alu 2 148 0 5 1095 210 37 0 0 chr15 66909161 66909188 -36585786 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 5 1095 383 179 43 0 chr15 66909234 66909291 -36585683 + polypurine Low_complexity Low_complexity 2 61 0 5 1095 2389 136 38 76 chr15 66909291 66909738 -36585236 + RLTR23 LTR ERV1 1 430 0 5 1095 383 179 43 0 chr15 66909738 66909797 -36585177 + polypurine Low_complexity Low_complexity 62 122 0 5 1095 1295 261 42 6 chr15 66909797 66910110 -36584864 - MTEb LTR MaLR -54 325 2 5 1095 812 343 68 11 chr15 66911221 66911575 -36583399 + MLT1D LTR MaLR 36 409 -96 5 1095 371 304 0 17 chr15 66911614 66911731 -36583243 + (TG)n Simple_repeat Simple_repeat 2 116 0 5 1095 959 250 31 55 chr15 66911736 66912028 -36582946 - B4 SINE B4 -6 286 2 5 1095 504 265 7 29 chr15 66912364 66912504 -36582470 + ID_B1 SINE B4 87 223 -1 5 1095 252 0 0 0 chr15 66913421 66913449 -36581525 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1095 243 0 0 0 chr15 66913565 66913592 -36581382 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1095 689 210 50 7 chr15 66913595 66913734 -36581240 - B1_Mm SINE Alu 0 147 3 5 1095 376 295 54 0 chr15 66913768 66913880 -36581094 - PB1D7 SINE Alu 0 120 3 5 1095 23 0 0 0 chr15 66913889 66913912 -36581062 + AT_rich Low_complexity Low_complexity 1 23 0 5 1095 201 39 0 0 chr15 66913920 66913946 -36581028 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1095 368 230 292 0 chr15 66913952 66914065 -36580909 - RSINE1 SINE B4 -17 148 3 5 1095 453 301 108 14 chr15 66915304 66915452 -36579522 + ORR1E LTR MaLR 5 166 -193 5 1095 257 271 134 10 chr15 66915483 66915580 -36579394 + ORR1E LTR MaLR 236 344 -35 5 1095 394 244 23 19 chr15 66915574 66915682 -36579292 - MLT1D LTR MaLR -458 169 69 5 1095 1232 199 60 39 chr15 66915953 66916287 -36578687 + RLTR15 LTR ERVK 1 341 -18 5 1095 266 363 17 40 chr15 66916310 66916485 -36578489 + L2b LINE L2 2940 3110 -265 5 1095 180 390 86 40 chr15 66916895 66917047 -36577927 + L2b LINE L2 3263 3421 -5 5 1095 343 130 13 13 chr15 66917251 66917329 -36577645 + (CA)n Simple_repeat Simple_repeat 1 78 0 5 1095 3790 82 10 2 chr15 66917613 66918116 -36576858 - Lx3_Mus LINE L1 -1 7008 6502 5 1095 277 264 101 62 chr15 66918518 66918647 -36576327 + MLT1G3 LTR MaLR 268 401 -7 5 1095 230 159 0 31 chr15 66918677 66918742 -36576232 + (CAGAGA)n Simple_repeat Simple_repeat 2 64 0 5 1095 407 209 84 42 chr15 66918750 66918845 -36576129 - RSINE1 SINE B4 -64 101 3 5 1095 635 226 80 7 chr15 66919093 66919231 -36575743 + MLT1G3 LTR MaLR 440 587 -8 5 1095 415 257 91 80 chr15 66919239 66919438 -36575536 - LTR85a LTR Gypsy? -489 213 13 6 1095 318 278 61 102 chr15 66919669 66919865 -36575109 - MER53 DNA hAT -5 188 1 6 1095 250 308 70 70 chr15 66920057 66920186 -36574788 - LTR50 LTR ERVL -615 180 52 6 1095 23 0 0 0 chr15 66920204 66920227 -36574747 + AT_rich Low_complexity Low_complexity 1 23 0 6 1095 188 200 0 0 chr15 66920332 66920367 -36574607 - MIRc SINE MIR -135 133 99 6 1095 288 271 56 9 chr15 66920679 66920787 -36574187 + MIR SINE MIR 36 148 -114 6 1095 2504 81 72 0 chr15 66921478 66921813 -36573161 - RLTR10D LTR ERVK 0 359 1 6 1095 940 228 14 19 chr15 66922606 66922816 -36572158 + B3 SINE B2 3 211 -5 6 1095 204 257 0 41 chr15 66923282 66923355 -36571619 - L2a LINE L2 -26 3400 3331 6 1095 1098 61 0 75 chr15 66923475 66923634 -36571340 + B1_Mus2 SINE Alu 1 147 0 6 1095 976 318 106 64 chr15 66924535 66924739 -36570235 - L1MB5 LINE L1 -27 6147 5969 6 1095 437 288 173 5 chr15 66924739 66924924 -36570050 - ID_B1 SINE B4 -6 218 3 6 1095 976 320 104 62 chr15 66924924 66925536 -36569438 - L1MB5 LINE L1 -206 5968 5302 6 1095 360 164 0 0 chr15 66925553 66925620 -36569354 + (TGG)n Simple_repeat Simple_repeat 3 69 0 6 1095 331 350 91 23 chr15 66925703 66925922 -36569052 - B4A SINE B4 -56 236 3 6 1095 254 263 143 8 chr15 66925924 66926043 -36568931 - L1MB5 LINE L1 -815 5331 5197 6 1095 432 301 22 8 chr15 66926056 66926190 -36568784 + RSINE1 SINE B4 1 136 -29 6 1095 1379 259 87 24 chr15 66926591 66927098 -36567876 - L1MA8 LINE L1 -224 6067 5529 6 1095 335 324 124 21 chr15 66927289 66927434 -36567540 - MLT1G1 LTR MaLR -14 565 406 6 1095 243 0 0 0 chr15 66927436 66927463 -36567511 + (CCCTAA)n Simple_repeat Simple_repeat 2 28 0 6 1095 259 333 0 12 chr15 66929908 66929993 -36564981 + MLT1I LTR MaLR 328 411 0 6 1095 715 170 10 0 chr15 66932154 66932364 -36562610 + (TG)n Simple_repeat Simple_repeat 1 212 0 6 1095 254 301 60 0 chr15 66932739 66932822 -36562152 - MER2 DNA MER2_type 0 345 258 6 1095 402 21 0 0 chr15 66933130 66933177 -36561797 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 1095 390 237 45 19 chr15 66933323 66933521 -36561453 + (TG)n Simple_repeat Simple_repeat 1 203 0 6 1095 180 179 0 114 chr15 66933946 66933990 -36560984 + MIRc SINE MIR 224 262 -6 6 1095 629 97 0 10 chr15 66935952 66936056 -36558918 + (GGGA)n Simple_repeat Simple_repeat 3 105 0 6 1095 1300 55 0 0 chr15 66936336 66936501 -36558473 + L1Md_T LINE L1 6418 6582 0 6 1095 246 301 110 33 chr15 66939047 66939229 -36555745 - L2c LINE L2 -178 3209 3014 6 1095 185 357 0 0 chr15 66940338 66940394 -36554580 - MIRc SINE MIR -132 136 81 6 1095 207 194 54 6 chr15 66940642 66940707 -36554267 + MIRc SINE MIR 55 125 -143 6 1095 351 0 0 0 chr15 66940858 66940897 -36554077 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 1095 190 309 107 0 chr15 66940965 66941049 -36553925 - MER5A DNA MER1_type -92 97 5 6 1095 2102 178 54 5 chr15 66941385 66941791 -36553183 + Lx LINE L1 6228 6653 -1 6 1095 227 306 83 0 chr15 66943021 66943093 -36551881 + MIRm SINE MIR 76 153 -123 6 1095 302 189 39 16 chr15 66943118 66943216 -36551758 + PB1D10 SINE Alu 3 109 -40 6 1095 212 261 55 55 chr15 66943198 66943271 -36551703 + ID4 SINE ID 8 80 -3 6 1095 182 162 54 0 chr15 66943413 66943450 -36551524 - MIRb SINE MIR -203 65 27 6 1095 206 301 0 64 chr15 66944338 66944416 -36550558 - L2b LINE L2 0 3375 3303 6 1095 230 277 67 78 chr15 66944705 66944795 -36550179 + MLT1D LTR MaLR 407 495 -10 6 1095 717 56 0 0 chr15 66944812 66944901 -36550073 - BC1_Mm scRNA scRNA -63 89 1 6 1095 252 204 18 18 chr15 66944854 66944909 -36550065 - ZP3AR Satellite Satellite -124 88 34 6 1095 356 284 84 56 chr15 66946084 66946263 -36548711 + MTEa LTR MaLR 189 372 -7 6 1095 432 0 0 0 chr15 66947564 66947612 -36547362 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 1095 224 311 78 0 chr15 66947961 66948064 -36546910 + MIRb SINE MIR 27 137 -131 6 1095 227 361 84 8 chr15 66948147 66948278 -36546696 - MIRc SINE MIR -107 161 21 6 1095 712 226 7 40 chr15 66949470 66949622 -36545352 + B3 SINE B2 4 150 -66 6 1095 361 81 32 0 chr15 66949624 66949686 -36545288 + (CA)n Simple_repeat Simple_repeat 1 64 0 6 1095 840 299 92 9 chr15 66949713 66949942 -36545032 + MTEa LTR MaLR 71 318 -61 6 1095 389 298 97 0 chr15 66949951 66950065 -36544909 + ORR1E LTR MaLR 6 130 -229 6 1095 374 231 0 13 chr15 66950097 66950176 -36544798 + ORR1E LTR MaLR 302 379 0 6 1095 1370 242 88 3 chr15 66950453 66950793 -36544181 + ORR1D2 LTR MaLR 2 370 0 6 1095 1252 35 7 0 chr15 66951962 66952107 -36542867 + B1_Mm SINE Alu 2 147 0 6 1095 441 0 0 0 chr15 66952110 66952159 -36542815 + (A)n Simple_repeat Simple_repeat 1 49 0 6 1095 261 371 30 22 chr15 66953290 66953425 -36541549 - MIR SINE MIR -107 155 20 6 1095 240 185 0 0 chr15 66954275 66954329 -36540645 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1095 1229 236 84 22 chr15 66954701 66955056 -36539918 + Lx8 LINE L1 6554 6930 -543 6 1095 444 163 0 0 chr15 66955063 66955149 -36539825 + (CA)n Simple_repeat Simple_repeat 1 86 0 6 1095 242 176 39 0 chr15 66955150 66955201 -36539773 - RLTR22_Mus LTR ERVK -493 1315 1263 6 1095 230 321 0 0 chr15 66955250 66955303 -36539671 + Lx8 LINE L1 6944 6996 -477 6 1095 198 0 0 0 chr15 66955307 66955329 -36539645 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 6 1095 927 274 109 73 chr15 66955379 66955839 -36539135 + Lx8 LINE L1 6984 7470 -3 6 1095 221 204 0 22 chr15 66957441 66957486 -36537488 + L2 LINE L2 3017 3060 -359 6 1095 848 259 78 82 chr15 66958958 66959215 -36535759 - B4 SINE B4 -22 270 15 6 1095 329 258 51 5 chr15 66960074 66960200 -36534774 + MIRb SINE MIR 24 172 -104 6 1095 340 337 124 14 chr15 66961492 66961710 -36533264 + MIR SINE MIR 9 257 -11 6 1095 224 338 0 0 chr15 66961710 66961784 -36533190 + (CCA)n Simple_repeat Simple_repeat 3 76 0 6 1095 875 239 17 62 chr15 66961984 66962225 -36532749 - MTE2a LTR MaLR 0 379 150 6 1095 282 272 57 28 chr15 66962395 66962501 -36532473 + RMER10A LTR ERVL 318 426 -16 6 1095 870 267 67 85 chr15 66962514 66962948 -36532026 - RMER10A LTR ERVL -16 426 1 6 1095 371 273 35 16 chr15 66962959 66963083 -36531891 - MTE2a LTR MaLR -191 188 64 6 1095 429 261 7 50 chr15 66963132 66963273 -36531701 + HAL1-2a_MD LINE L1 2341 2475 -549 6 1095 315 281 141 38 chr15 66963497 66963682 -36531292 + MLT1B LTR MaLR 178 381 -9 6 1095 256 260 37 61 chr15 66963707 66963789 -36531185 - MIRm SINE MIR -125 151 72 6 1095 240 308 21 42 chr15 66964234 66964329 -36530645 + MIRb SINE MIR 75 167 -101 6 1095 260 250 143 9 chr15 66966187 66966292 -36528682 - Charlie5 DNA MER1_type -2490 134 16 6 1095 1336 165 4 18 chr15 66966957 66967185 -36527789 + URR1B DNA MER1_type 1 225 0 6 1095 2000 137 63 23 chr15 66967640 66967990 -36526984 + ORR1B2 LTR MaLR 1 364 -3 6 1095 668 299 28 23 chr15 66967990 66968205 -36526769 + ID_B1 SINE B4 9 224 0 6 1095 2886 53 66 33 chr15 66968471 66968863 -36526111 - L1_Mus1 LINE L1 0 6567 6163 6 1095 321 49 0 0 chr15 66968863 66968904 -36526070 + L1_Mus1 LINE L1 6112 6152 -414 6 1095 191 227 30 0 chr15 66970082 66970127 -36524847 + MIR3 SINE MIR 107 154 -54 6 1095 333 179 0 82 chr15 66970725 66970798 -36524176 - RMER15 LTR ERVL -422 153 87 6 1095 2441 156 38 34 chr15 66970891 66971309 -36523665 + MTC LTR MaLR 1 420 -1 6 1095 472 270 14 21 chr15 66972141 66972281 -36522693 + ID_B1 SINE B4 86 224 0 6 1095 236 102 20 0 chr15 66972528 66972577 -36522397 + (TTTTTG)n Simple_repeat Simple_repeat 1 50 0 6 1095 180 216 0 0 chr15 66974406 66974443 -36520531 + MIR SINE MIR 113 149 -113 6 1095 473 284 78 50 chr15 66974497 66974716 -36520258 + MIR SINE MIR 17 241 -21 6 1095 531 347 15 20 chr15 66975265 66975465 -36519509 + MER58A DNA MER1_type 9 207 -17 6 1095 197 311 162 0 chr15 66975598 66975672 -36519302 - L2c LINE L2 -291 3096 3011 6 1095 207 269 31 41 chr15 66976829 66976926 -36518048 + (CATG)n Simple_repeat Simple_repeat 1 96 0 6 1095 221 317 66 19 chr15 66976960 66977066 -36517908 - MIR SINE MIR -54 208 98 6 1095 339 25 0 0 chr15 66977159 66977199 -36517775 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1096 653 24 12 0 chr15 66979402 66979485 -36515489 + (CA)n Simple_repeat Simple_repeat 2 85 0 6 1096 916 296 77 75 chr15 66979504 66979573 -36515401 + RMER5 LTR ERV1 49 111 -423 6 1096 1121 192 48 5 chr15 66979573 66979782 -36515192 + ID_B1 SINE B4 3 220 -4 6 1096 916 296 77 75 chr15 66979782 66980180 -36514794 + RMER5 LTR ERV1 112 517 -17 6 1096 218 160 20 21 chr15 66980286 66980336 -36514638 - MIRc SINE MIR -103 159 117 6 1096 197 233 23 0 chr15 66980306 66980349 -36514625 - MIRm SINE MIR -126 150 107 6 1096 1390 189 130 42 chr15 66981642 66981838 -36513136 - ORR1C2 LTR MaLR 0 384 157 6 1096 396 0 0 0 chr15 66981838 66981882 -36513092 + (GA)n Simple_repeat Simple_repeat 2 45 0 6 1096 1390 189 130 42 chr15 66981882 66982038 -36512936 - ORR1C2 LTR MaLR -228 156 1 6 1096 21 0 0 0 chr15 66983540 66983561 -36511413 + AT_rich Low_complexity Low_complexity 1 21 0 6 1096 422 286 16 39 chr15 66983691 66983808 -36511166 + ORR1E LTR MaLR 1 126 -244 6 1096 375 23 0 0 chr15 66983808 66983852 -36511122 + (TC)n Simple_repeat Simple_repeat 2 45 0 6 1096 226 297 114 72 chr15 66983852 66983908 -36511066 + ORR1E LTR MaLR 127 181 -189 6 1096 227 310 91 11 chr15 66985366 66985454 -36509520 + MLT1H LTR MaLR 43 137 -412 6 1096 259 279 16 32 chr15 66985511 66985574 -36509400 + tRNA-Ala-GCY_ tRNA tRNA 3 64 -11 6 1096 297 128 0 0 chr15 66986835 66986882 -36508092 + (TCC)n Simple_repeat Simple_repeat 3 49 0 6 1096 3466 54 75 0 chr15 66988584 66989026 -36505948 - MT2C_Mm LTR ERVL 0 475 1 6 1096 863 318 25 0 chr15 66989686 66989966 -36505008 + B4A SINE B4 1 287 -5 7 1096 27 49 0 0 chr15 66989980 66990021 -36504953 + AT_rich Low_complexity Low_complexity 1 41 0 7 1096 189 147 0 0 chr15 66990123 66990157 -36504817 + (CATG)n Simple_repeat Simple_repeat 3 36 0 7 1096 2710 121 13 0 chr15 66990205 66990594 -36504380 + ORR1B1 LTR MaLR 1 394 0 7 1096 272 204 109 69 chr15 66991261 66991373 -36503601 - MIR3 SINE MIR -49 159 47 7 1096 342 0 0 0 chr15 66991999 66992037 -36502937 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 1096 376 291 27 16 chr15 66993149 66993309 -36501665 - MIR SINE MIR -45 223 63 7 1096 669 86 0 0 chr15 66993772 66993865 -36501109 + (TC)n Simple_repeat Simple_repeat 2 94 0 7 1096 548 246 26 72 chr15 66993904 66994057 -36500917 - RSINE1 SINE B4 -9 156 11 7 1096 378 0 0 0 chr15 66994172 66994214 -36500760 + (T)n Simple_repeat Simple_repeat 1 42 0 7 1096 267 293 91 63 chr15 66994984 66995159 -36499815 + MIRb SINE MIR 3 186 -82 7 1096 963 89 0 0 chr15 66995288 66995423 -36499551 + (GAA)n Simple_repeat Simple_repeat 1 135 0 7 1096 435 248 32 0 chr15 66995443 66995568 -36499406 + RSINE1 SINE B4 9 137 -28 7 1096 224 0 0 61 chr15 66996013 66996046 -36498928 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1096 550 257 18 0 chr15 66996339 66996452 -36498522 - PB1D9 SINE Alu 0 120 6 7 1096 249 339 36 80 chr15 66996377 66996515 -36498459 - MT2B2 LTR ERVL -347 237 106 7 1096 729 238 24 98 chr15 66996516 66996700 -36498274 + B3A SINE B2 7 180 -18 7 1096 392 37 0 18 chr15 66996700 66996755 -36498219 + (TA)n Simple_repeat Simple_repeat 2 55 0 7 1096 729 238 24 98 chr15 66996755 66996775 -36498199 + B3A SINE B2 181 196 -2 7 1096 3795 81 0 32 chr15 66996997 66997522 -36497452 - L1Md_F2 LINE L1 -11 6571 6064 7 1096 804 321 28 4 chr15 66997671 66997921 -36497053 + B4A SINE B4 4 259 -33 7 1096 13494 40 1 6 chr15 66997921 66999494 -36495480 + L1_Mm LINE L1 3887 5461 -422 7 1096 3226 14 0 0 chr15 66999494 66999852 -36495122 + L1Md_A LINE L1 6225 6582 0 7 1096 13494 40 1 6 chr15 66999852 67000000 -36494974 + L1_Mm LINE L1 5462 5599 -284 7 1096 8235 41 2 3 chr15 67000000 67000981 -36493993 + L1Md_F2 LINE L1 5600 6579 -3 1 1096 233 29 0 29 chr15 67000986 67001021 -36493953 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1096 807 154 23 0 chr15 67001184 67001339 -36493635 - B2_Mm2 SINE B2 -40 176 1 3 1096 300 282 8 76 chr15 67001779 67001898 -36493076 + MLT1A1 LTR MaLR 286 396 -12 4 1096 303 338 69 28 chr15 67004862 67005078 -36489896 + MER44A DNA MER2_type 2 226 -113 5 1096 201 316 0 0 chr15 67006025 67006082 -36488892 - MIRc SINE MIR -119 149 93 6 1096 354 123 0 0 chr15 67010904 67010961 -36484013 + (TTCA)n Simple_repeat Simple_repeat 1 57 0 7 1096 351 0 0 0 chr15 67011520 67011559 -36483415 + (TC)n Simple_repeat Simple_repeat 2 40 0 8 1096 297 0 0 0 chr15 67011559 67011591 -36483383 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1096 290 302 43 8 chr15 67011596 67011713 -36483261 - RMER15 LTR ERVL -18 557 437 1 1096 309 89 0 0 chr15 67011939 67011984 -36482990 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1096 300 53 0 0 chr15 67012667 67012705 -36482269 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 1 1096 568 238 48 0 chr15 67012712 67012838 -36482136 - RSINE1 SINE B4 -30 135 4 1 1096 275 305 32 41 chr15 67013255 67013378 -36481596 + MLT1K LTR MaLR 455 576 -19 1 1096 366 23 0 0 chr15 67013982 67014025 -36480949 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1096 283 291 111 21 chr15 67014031 67014175 -36480799 - MLT1C LTR MaLR -305 162 6 1 1096 444 163 0 0 chr15 67015631 67015717 -36479257 + (TG)n Simple_repeat Simple_repeat 1 86 0 1 1096 351 0 0 0 chr15 67015955 67015994 -36478980 + (TTTTG)n Simple_repeat Simple_repeat 4 42 0 1 1096 814 309 22 69 chr15 67016244 67016606 -36478368 - ORR1E LTR MaLR -13 346 2 1 1096 276 293 92 65 chr15 67017731 67017913 -36477061 + B3A SINE B2 3 212 -4 2 1096 1172 68 7 0 chr15 67017917 67018063 -36476911 + B1_Mm SINE Alu 1 147 0 2 1096 351 0 0 0 chr15 67018187 67018226 -36476748 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1096 3428 31 5 0 chr15 67018226 67018617 -36476357 + MTA_Mm LTR MaLR 4 396 0 2 1096 438 20 0 0 chr15 67018617 67018668 -36476306 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1096 779 277 84 27 chr15 67018670 67018933 -36476041 - B4 SINE B4 -8 284 7 2 1096 390 315 76 27 chr15 67019228 67019453 -36475521 + MIR SINE MIR 7 242 -20 2 1096 683 170 18 0 chr15 67019918 67020030 -36474944 - Lx9 LINE L1 -418 7226 7113 2 1096 441 311 69 40 chr15 67020030 67020204 -36474770 + B4 SINE B4 114 292 0 2 1096 327 266 19 6 chr15 67020204 67020321 -36474653 + GA-rich Low_complexity Low_complexity 2 121 0 2 1096 1265 64 0 6 chr15 67020321 67020494 -36474480 + (GAA)n Simple_repeat Simple_repeat 3 174 0 3 1096 327 266 19 6 chr15 67020494 67020535 -36474439 + polypurine Low_complexity Low_complexity 122 161 0 3 1096 272 245 0 21 chr15 67021001 67021097 -36473877 + GA-rich Low_complexity Low_complexity 2 95 0 3 1096 1068 236 153 9 chr15 67021213 67021534 -36473440 + ORR1D2 LTR MaLR 4 370 0 3 1096 1382 219 45 21 chr15 67022937 67023273 -36471701 + ORR1D1 LTR MaLR 1 344 -30 3 1096 285 355 24 0 chr15 67023601 67023725 -36471249 - RMER30 DNA MER1_type -6 196 70 3 1096 219 313 36 12 chr15 67024102 67024186 -36470788 - B1F1 SINE Alu -62 87 2 3 1096 667 92 10 0 chr15 67024235 67024333 -36470641 - ORR1A4 LTR MaLR 0 329 231 3 1096 286 336 36 22 chr15 67024328 67024465 -36470509 - RSINE1 SINE B4 -25 140 2 3 1096 1343 128 0 107 chr15 67024711 67024974 -36470000 - ORR1A4 LTR MaLR -94 235 1 3 1096 208 297 31 0 chr15 67025148 67025212 -36469762 + CT-rich Low_complexity Low_complexity 4 69 0 4 1096 192 338 0 0 chr15 67026124 67026192 -36468782 - MIRc SINE MIR -119 149 82 4 1096 26220 152 25 8 chr15 67026279 67028458 -36466516 + L1_Mus4 LINE L1 716 2922 -2961 4 1096 4560 57 39 5 chr15 67028458 67029026 -36465948 + LTRIS_Mus LTR ERV1 1 587 0 4 1096 26220 134 26 7 chr15 67029026 67032667 -36462307 + L1_Mus4 LINE L1 2923 6636 0 4 1096 432 0 0 0 chr15 67032690 67032738 -36462236 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1096 813 30 0 0 chr15 67033586 67033686 -36461288 + (TTTC)n Simple_repeat Simple_repeat 3 102 0 4 1096 318 87 0 0 chr15 67033756 67033802 -36461172 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1096 348 269 0 0 chr15 67034318 67034385 -36460589 - B3 SINE B2 -137 79 13 4 1096 207 269 71 29 chr15 67034702 67034815 -36460159 + MIR SINE MIR 30 135 -133 4 1096 219 303 15 0 chr15 67035330 67035396 -36459578 - ID4 SINE ID -15 68 2 4 1096 457 263 150 28 chr15 67035469 67035723 -36459251 - L1MEg LINE L1 -4523 1561 1277 5 1096 267 271 184 22 chr15 67035949 67036085 -36458889 - L1M5 LINE L1 -336 5837 5680 5 1096 244 259 54 84 chr15 67036343 67036481 -36458493 - MIRc SINE MIR -102 166 34 5 1096 600 14 0 0 chr15 67036636 67036705 -36458269 + (CCA)n Simple_repeat Simple_repeat 3 71 0 5 1096 207 139 0 0 chr15 67036986 67037022 -36457952 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1096 283 254 70 0 chr15 67037199 67037270 -36457704 + ORR1D1 LTR MaLR 106 181 -193 5 1096 295 181 28 0 chr15 67037270 67037342 -36457632 + CT-rich Low_complexity Low_complexity 3 76 0 5 1096 897 217 26 0 chr15 67037353 67037542 -36457432 + ORR1D1 LTR MaLR 173 366 -8 5 1096 234 0 0 0 chr15 67037600 67037626 -36457348 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1096 288 0 0 0 chr15 67037626 67037657 -36457317 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 1096 612 195 16 0 chr15 67037747 67037870 -36457104 + ORR1C2 LTR MaLR 260 384 0 5 1096 225 161 16 125 chr15 67040872 67040936 -36454038 + L1M2 LINE L1 444 500 -6349 6 1096 186 128 0 0 chr15 67042174 67042213 -36452761 + (T)n Simple_repeat Simple_repeat 1 39 0 6 1096 315 0 0 0 chr15 67042651 67042686 -36452288 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1096 921 147 0 0 chr15 67043276 67043432 -36451542 + (TTCTC)n Simple_repeat Simple_repeat 5 160 0 6 1096 186 103 0 0 chr15 67043457 67043486 -36451488 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 6 1096 268 248 75 47 chr15 67043970 67044076 -36450898 - L1MD3 LINE L1 -18 7977 7869 6 1096 672 77 0 0 chr15 67044077 67044168 -36450806 + (TTTCC)n Simple_repeat Simple_repeat 3 93 0 6 1096 996 117 21 53 chr15 67044168 67044325 -36450649 - B2_Mm2 SINE B2 -12 183 32 6 1096 7471 6 0 0 chr15 67044325 67045138 -36449836 - L1Md_T LINE L1 0 6582 5770 6 1096 996 117 21 53 chr15 67045138 67045169 -36449805 - B2_Mm2 SINE B2 -164 31 1 6 1096 4434 172 98 4 chr15 67048196 67048978 -36445996 - RMER13A LTR ERVK 0 860 5 6 1096 1482 183 120 75 chr15 67050593 67050721 -36444253 + MTD LTR MaLR 1 120 -299 7 1096 1134 138 32 5 chr15 67050721 67050910 -36444064 - B2_Mm2 SINE B2 0 195 2 7 1096 1482 183 120 75 chr15 67050910 67051182 -36443792 + MTD LTR MaLR 121 419 0 7 1096 573 15 0 0 chr15 67051348 67051414 -36443560 + (TC)n Simple_repeat Simple_repeat 1 66 0 7 1096 507 236 63 41 chr15 67051414 67051635 -36443339 + Lx9 LINE L1 7384 7609 -35 7 1096 300 263 244 8 chr15 67054521 67054640 -36440334 + RSINE1 SINE B4 4 150 -15 7 1096 253 220 17 17 chr15 67055714 67055774 -36439200 + GA-rich Low_complexity Low_complexity 3 62 0 7 1096 1522 223 79 8 chr15 67056725 67057100 -36437874 + MTD LTR MaLR 23 405 -14 7 1096 486 362 66 14 chr15 67057589 67057875 -36437099 + MER44A DNA MER2_type 8 308 -31 7 1096 713 253 57 111 chr15 67058822 67058858 -36436116 - RLTR11A LTR ERVK -33 495 460 7 1096 423 0 0 0 chr15 67058858 67058905 -36436069 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 1096 713 253 57 111 chr15 67058905 67059201 -36435773 - RLTR11A LTR ERVK -69 459 182 7 1096 404 252 15 44 chr15 67059206 67059343 -36435631 + RLTR11A LTR ERVK 379 511 -17 8 1096 689 275 104 0 chr15 67059599 67059792 -36435182 + ID_B1 SINE B4 2 214 -10 8 1096 483 290 40 22 chr15 67060210 67060432 -36434542 - L1MA5 LINE L1 -10 6290 6065 8 1096 210 118 0 0 chr15 67061477 67061511 -36433463 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 1096 348 287 30 37 chr15 67061785 67061919 -36433055 - MER20 DNA MER1_type 0 219 87 8 1096 1879 201 27 25 chr15 67062478 67062881 -36432093 + MTB_Mm LTR MaLR 4 407 0 8 1096 209 358 12 0 chr15 67063497 67063578 -36431396 + CT-rich Low_complexity Low_complexity 4 85 0 8 1096 1004 290 101 14 chr15 67063728 67064145 -36430829 - Lx8 LINE L1 -121 7352 6900 8 1096 385 293 38 0 chr15 67064165 67064298 -36430676 - L1MA5 LINE L1 -96 6204 6067 8 1096 576 272 76 8 chr15 67064450 67064687 -36430287 + Charlie26a DNA MER1_type 65 317 -8 8 1096 293 261 267 56 chr15 67064912 67065107 -36429867 - MLT1D LTR MaLR -10 495 260 9 1096 189 130 56 0 chr15 67065485 67065509 -36429465 + polypyrimidine Low_complexity Low_complexity 34 58 0 9 1096 1074 135 0 0 chr15 67065509 67065687 -36429287 + (TCCC)n Simple_repeat Simple_repeat 1 178 0 9 1096 189 130 56 0 chr15 67065687 67065716 -36429258 + polypyrimidine Low_complexity Low_complexity 3 33 0 9 1096 1550 208 49 33 chr15 67066220 67066588 -36428386 + ORR1D1 LTR MaLR 1 374 0 9 1096 1246 270 22 34 chr15 67066588 67066937 -36428037 - ORR1E LTR MaLR -10 349 4 9 1096 194 91 0 29 chr15 67068188 67068222 -36426752 + (TCCCC)n Simple_repeat Simple_repeat 3 35 0 9 1096 249 253 72 0 chr15 67069467 67069550 -36425424 + MTEa LTR MaLR 288 376 -3 9 1096 25 51 0 0 chr15 67069908 67069947 -36425027 + AT_rich Low_complexity Low_complexity 1 39 0 9 1096 445 376 93 25 chr15 67070167 67070532 -36424442 + MLT1I LTR MaLR 22 411 0 9 1096 1999 242 64 58 chr15 67071783 67071966 -36423008 - Lx9 LINE L1 0 7644 7467 1 1096 627 48 0 0 chr15 67071966 67072049 -36422925 + (CA)n Simple_repeat Simple_repeat 1 83 0 1 1096 1999 242 64 58 chr15 67072049 67072588 -36422386 - Lx9 LINE L1 -178 7466 6918 1 1096 7565 13 0 0 chr15 67072957 67073941 -36421033 - L1Md_T LINE L1 -558 6024 5041 1 1096 4937 35 0 0 chr15 67073941 67074514 -36420460 + L1Md_T LINE L1 6010 6582 0 1 1096 312 363 12 23 chr15 67075234 67075406 -36419568 + CT-rich Low_complexity Low_complexity 4 173 0 1 1096 542 252 76 0 chr15 67075588 67075719 -36419255 + B1F2 SINE Alu 1 141 -8 1 1096 315 0 0 0 chr15 67075778 67075813 -36419161 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1 1096 1991 182 80 10 chr15 67075816 67076204 -36418770 + MTC LTR MaLR 5 419 -2 1 1096 575 14 0 14 chr15 67076211 67076284 -36418690 + (TCTA)n Simple_repeat Simple_repeat 4 75 0 1 1096 276 53 0 0 chr15 67076289 67076327 -36418647 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1096 621 203 8 0 chr15 67076346 67076464 -36418510 - RSINE1 SINE B4 -28 137 19 1 1096 231 329 0 24 chr15 67077788 67077872 -36417102 - ID4_ SINE ID 0 83 2 1 1096 612 245 60 13 chr15 67077919 67078068 -36416906 - RSINE1 SINE B4 -9 156 1 1 1096 407 220 49 70 chr15 67078069 67078211 -36416763 - ID_B1 SINE B4 -2 222 84 1 1096 2395 83 3 6 chr15 67078233 67078560 -36416414 - L1_Mus1 LINE L1 0 6567 6242 1 1096 308 295 137 12 chr15 67078564 67078732 -36416242 - L1MD3 LINE L1 -297 7698 7510 1 1096 1056 264 14 113 chr15 67078792 67079207 -36415767 - MTE2a LTR MaLR 0 379 6 1 1096 303 242 31 31 chr15 67079222 67079320 -36415654 - L1MD3 LINE L1 -571 7424 7327 1 1096 194 275 0 0 chr15 67079520 67079560 -36415414 + MIRc SINE MIR 40 79 -189 1 1096 468 0 0 0 chr15 67080206 67080258 -36414716 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1096 189 0 0 0 chr15 67081366 67081387 -36413587 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 1096 389 331 69 0 chr15 67081459 67081619 -36413355 - B4A SINE B4 -7 285 115 1 1096 5252 212 61 30 chr15 67083074 67084274 -36410700 - Lx9 LINE L1 -2 7642 6404 1 1096 180 0 0 0 chr15 67084274 67084294 -36410680 + (CTG)n Simple_repeat Simple_repeat 1 20 0 1 1096 5252 212 61 30 chr15 67084294 67084332 -36410642 - Lx9 LINE L1 -1241 6403 6365 1 1096 225 0 0 0 chr15 67084489 67084514 -36410460 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1096 182 132 20 81 chr15 67084798 67084897 -36410077 + GA-rich Low_complexity Low_complexity 2 94 0 1 1096 258 143 0 0 chr15 67084911 67084960 -36410014 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 1 1096 1341 266 121 14 chr15 67085115 67085565 -36409409 - Lx9 LINE L1 -1592 6052 5554 1 1096 1007 282 74 44 chr15 67085895 67086259 -36408715 + MTE2b LTR MaLR 1 375 -4 1 1096 817 141 0 48 chr15 67086706 67086893 -36408081 + CT-rich Low_complexity Low_complexity 3 180 0 1 1096 302 250 167 43 chr15 67086901 67087039 -36407935 - HAL1-3A_ME LINE L1 -420 2438 2284 1 1096 390 42 0 0 chr15 67087059 67087107 -36407867 + (TCCC)n Simple_repeat Simple_repeat 4 51 0 1 1096 1097 146 98 5 chr15 67087233 67087328 -36407646 + Lx LINE L1 6419 6534 -120 1 1096 357 24 0 0 chr15 67087328 67087370 -36407604 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1096 1097 146 98 5 chr15 67087370 67087488 -36407486 + Lx LINE L1 6535 6651 -3 1 1096 532 328 102 5 chr15 67087745 67088137 -36406837 + L1MEc LINE L1 380 809 -5591 1 1096 396 0 0 0 chr15 67088371 67088415 -36406559 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1096 24 0 0 0 chr15 67088500 67088524 -36406450 + AT_rich Low_complexity Low_complexity 1 24 0 1 1096 509 147 11 0 chr15 67088527 67088622 -36406352 + (TA)n Simple_repeat Simple_repeat 1 96 0 1 1096 357 269 125 8 chr15 67088723 67088843 -36406131 + B1F SINE Alu 9 142 -7 1 1096 324 70 0 0 chr15 67088853 67088896 -36406078 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1096 536 254 128 7 chr15 67088896 67089170 -36405804 + L1MEc LINE L1 1151 1457 -4943 1 1096 8963 29 0 0 chr15 67089293 67090344 -36404630 - L1Md_T LINE L1 -1179 4704 3654 1 1096 7913 20 0 0 chr15 67090339 67091234 -36403740 + L1Md_T LINE L1 4692 5586 -297 1 1096 9142 6 0 0 chr15 67091234 67092229 -36402745 + L1Md_T LINE L1 5587 6581 -1 1 1096 616 289 7 0 chr15 67092603 67092745 -36402229 + RSINE1 SINE B4 23 165 0 1 1096 28 86 0 0 chr15 67092783 67092853 -36402121 + AT_rich Low_complexity Low_complexity 1 70 0 1 1096 21 0 0 0 chr15 67093086 67093107 -36401867 + AT_rich Low_complexity Low_complexity 1 21 0 1 1096 891 269 81 43 chr15 67094248 67094594 -36400380 + ORR1E LTR MaLR 1 359 0 1 1096 181 322 23 11 chr15 67094602 67094690 -36400284 - MIRb SINE MIR -121 147 59 1 1096 24 0 0 0 chr15 67094821 67094845 -36400129 + AT_rich Low_complexity Low_complexity 1 24 0 1 1096 404 37 19 0 chr15 67096304 67096358 -36398616 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 1096 411 282 129 35 chr15 67096644 67096843 -36398131 + B3A SINE B2 2 216 0 1 1096 245 335 120 42 chr15 67096908 67097316 -36397658 + L1MEf LINE L1 1212 1651 -4549 1 1096 38764 29 0 0 chr15 67097409 67103894 -36391080 - L1Md_T LINE L1 0 6585 35 1 1096 284 318 35 17 chr15 67104147 67104320 -36390654 + L1MC4 LINE L1 7723 7898 -144 1 1096 261 317 94 19 chr15 67104320 67104426 -36390548 + BC1_Mm scRNA scRNA 1 114 -38 1 1096 515 253 112 162 chr15 67104817 67105155 -36389819 + MTE2b LTR MaLR 1 320 -59 1 1096 642 217 7 7 chr15 67105155 67105294 -36389680 + MTD LTR MaLR 3 141 -278 1 1096 401 345 89 15 chr15 67105455 67105658 -36389316 + Tigger5 DNA MER2_type 2 219 -2187 1 1096 261 259 0 0 chr15 67105700 67105758 -36389216 + Tigger5 DNA MER2_type 2349 2406 0 1 1096 279 190 0 0 chr15 67105902 67105960 -36389014 + GA-rich Low_complexity Low_complexity 1 58 0 1 1096 316 194 0 0 chr15 67106422 67106484 -36388490 - Lx7 LINE L1 0 7696 7635 1 1096 29 28 0 0 chr15 67106632 67106668 -36388306 + AT_rich Low_complexity Low_complexity 1 36 0 1 1096 236 312 82 9 chr15 67107078 67107188 -36387786 + MIR SINE MIR 113 230 -32 1 1096 3654 8 0 0 chr15 67107323 67107719 -36387255 - L1_Mm LINE L1 -70 5813 5418 1 1096 8256 2 0 0 chr15 67107720 67108614 -36386360 + L1Md_A LINE L1 5689 6582 0 1 1097 200 286 15 31 chr15 67109052 67109117 -36385857 + CT-rich Low_complexity Low_complexity 1 64 0 1 1097 1311 213 71 51 chr15 67110492 67110844 -36384130 + ORR1E LTR MaLR 1 359 0 1 1097 495 0 0 0 chr15 67111657 67111712 -36383262 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 1097 7403 78 14 9 chr15 67111819 67112811 -36382163 - L1_Mus4 LINE L1 -1 6635 5639 1 1097 2981 153 40 4 chr15 67112811 67113329 -36381645 + L1_Mm LINE L1 4813 5349 -534 1 1097 1963 152 0 0 chr15 67113633 67113930 -36381044 + L1_Mm LINE L1 5353 5649 -234 1 1097 3319 34 21 3 chr15 67113977 67114366 -36380608 + MTA_Mm LTR MaLR 1 396 0 1 1097 561 337 18 0 chr15 67115266 67115429 -36379545 - B4A SINE B4 -113 179 14 1 1097 230 376 60 16 chr15 67115808 67115992 -36378982 + MIRb SINE MIR 21 212 -56 1 1097 477 333 71 18 chr15 67116058 67116339 -36378635 - MLT1D LTR MaLR -7 498 203 1 1097 333 47 0 0 chr15 67116344 67116387 -36378587 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1097 483 329 76 67 chr15 67117276 67117483 -36377491 - ORR1E LTR MaLR 0 379 153 1 1097 3133 63 2 8 chr15 67117483 67117881 -36377093 + MTA_Mm LTR MaLR 1 396 0 1 1097 8296 70 11 5 chr15 67117881 67118972 -36376002 + MTA_Mm-int LTR MaLR 1 1098 0 1 1097 3104 56 2 12 chr15 67118972 67119372 -36375602 + MTA_Mm LTR MaLR 1 396 0 1 1097 483 326 80 77 chr15 67119372 67119520 -36375454 - ORR1E LTR MaLR -207 152 3 1 1097 787 184 6 11 chr15 67119541 67119717 -36375257 + CT-rich Low_complexity Low_complexity 2 176 0 1 1097 402 147 0 0 chr15 67122439 67122507 -36372467 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 1097 1619 153 127 3 chr15 67122803 67123118 -36371856 - ORR1B1 LTR MaLR 0 394 41 1 1097 293 238 150 0 chr15 67123252 67123332 -36371642 - PB1D10 SINE Alu -19 98 7 1 1097 309 342 27 0 chr15 67123777 67123888 -36371086 - MIR SINE MIR -143 119 6 1 1097 2248 101 3 0 chr15 67124016 67124334 -36370640 - ORR1A2 LTR MaLR -8 319 1 1 1097 2028 161 22 14 chr15 67124461 67124825 -36370149 + ORR1B2 LTR MaLR 1 367 0 1 1097 427 274 20 220 chr15 67125854 67126195 -36368779 + B4A SINE B4 2 274 -18 1 1097 396 40 0 0 chr15 67126198 67126248 -36368726 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1097 25 0 0 0 chr15 67128520 67128545 -36366429 + AT_rich Low_complexity Low_complexity 1 25 0 1 1097 511 343 28 6 chr15 67128559 67128738 -36366236 - B3A SINE B2 -15 183 1 1 1097 276 30 0 0 chr15 67128974 67129007 -36365967 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1097 482 230 71 36 chr15 67130882 67130897 -36364077 - B1F1 SINE Alu 0 149 5 1 1097 569 232 32 0 chr15 67130897 67131022 -36363952 - ID_B1 SINE B4 -10 214 86 1 1097 1332 283 89 106 chr15 67131025 67131334 -36363640 + L1M4 LINE L1 3931 4207 -1939 1 1097 849 268 0 15 chr15 67131334 67131531 -36363443 + B3A SINE B2 1 194 -4 1 1097 1332 283 89 106 chr15 67131531 67132608 -36362366 + L1M4 LINE L1 4208 5293 -853 1 1097 336 310 91 5 chr15 67132732 67132943 -36362031 + L1M4 LINE L1 5494 5736 -442 1 1097 3449 40 0 0 chr15 67133999 67134395 -36360579 + MTA_Mm LTR MaLR 1 396 0 1 1097 2976 95 7 12 chr15 67134713 67135140 -36359834 - L1_Mus3 LINE L1 0 6638 6214 1 1097 310 317 43 21 chr15 67135775 67135962 -36359012 + RMER15 LTR ERVL 370 560 -15 1 1097 290 303 0 0 chr15 67136188 67136264 -36358710 - MLT1N2 LTR MaLR -369 193 118 1 1097 232 176 61 98 chr15 67136770 67136852 -36358122 - MLT1A1 LTR MaLR -12 396 318 1 1097 184 289 79 0 chr15 67137158 67137234 -36357740 - L2b LINE L2 -221 3154 3073 1 1097 37083 4 0 0 chr15 67138282 67143092 -36351882 - L1Md_A LINE L1 0 6582 1773 1 1097 379 263 0 95 chr15 67143252 67143271 -36351703 - ID_B1 SINE B4 -2 222 90 1 1097 786 148 0 0 chr15 67143271 67143399 -36351575 - B1_Mur4 SINE Alu -13 137 10 1 1097 408 0 75 38 chr15 67144180 67144260 -36350714 + (CAAAA)n Simple_repeat Simple_repeat 4 86 0 1 1097 262 80 40 0 chr15 67144261 67144311 -36350663 + (CCAA)n Simple_repeat Simple_repeat 4 55 0 1 1097 355 290 9 0 chr15 67144538 67144645 -36350329 - Tigger5 DNA MER2_type -141 2265 2158 1 1097 714 102 0 0 chr15 67145149 67145276 -36349698 + (TC)n Simple_repeat Simple_repeat 1 127 0 1 1097 291 54 0 0 chr15 67145276 67145312 -36349662 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1097 322 248 85 42 chr15 67146744 67146862 -36348112 - MT2A LTR ERVL -410 123 1 2 1097 261 333 128 0 chr15 67146895 67146997 -36347977 - MER5A DNA MER1_type -71 118 4 2 1097 192 280 120 51 chr15 67147487 67147645 -36347329 + MIRb SINE MIR 23 191 -77 2 1097 180 0 0 0 chr15 67147925 67147945 -36347029 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1097 254 31 0 0 chr15 67147945 67147988 -36346986 - L1_Mus2 LINE L1 0 6566 6529 2 1097 2393 73 0 0 chr15 67148119 67148420 -36346554 - L1Md_F2 LINE L1 -339 6243 5943 2 1097 2740 50 0 12 chr15 67148420 67148763 -36346211 + L1Md_F2 LINE L1 6232 6570 -12 2 1097 315 0 0 0 chr15 67149351 67149386 -36345588 + (TC)n Simple_repeat Simple_repeat 2 36 0 2 1097 252 0 0 0 chr15 67149386 67149413 -36345561 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1097 431 311 32 11 chr15 67149727 67149912 -36345062 - L1M2 LINE L1 -2580 4265 4077 2 1097 557 97 0 28 chr15 67149920 67150026 -36344948 - RMER17B LTR ERVK -498 460 358 2 1097 441 0 0 0 chr15 67150027 67150076 -36344898 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 1097 339 25 0 0 chr15 67150076 67150115 -36344859 + (GA)n Simple_repeat Simple_repeat 2 41 0 2 1097 1001 317 106 67 chr15 67150132 67150389 -36344585 - L1M2 LINE L1 -2758 4087 3878 2 1097 839 291 65 25 chr15 67150389 67150668 -36344306 - B4 SINE B4 -2 290 1 2 1097 1001 317 106 67 chr15 67150668 67151632 -36343342 - L1M2 LINE L1 -2968 3877 2819 2 1097 314 309 35 23 chr15 67151898 67152070 -36342904 - L1M2 LINE L1 -4340 2509 2336 2 1097 502 299 16 49 chr15 67152128 67152311 -36342663 - B4 SINE B4 -7 285 109 2 1097 371 21 0 20 chr15 67152499 67152548 -36342426 + (TC)n Simple_repeat Simple_repeat 2 49 0 2 1097 262 247 45 126 chr15 67153233 67153344 -36341630 + RLTR24 LTR ERV1 353 454 -75 2 1097 240 288 115 18 chr15 67153396 67153509 -36341465 + MER20 DNA MER1_type 93 216 -3 2 1097 462 374 78 36 chr15 67153854 67154365 -36340609 + MLT1F2 LTR MaLR 12 546 -14 2 1097 4711 17 0 0 chr15 67154937 67155464 -36339510 - L1Md_A LINE L1 0 6582 6056 2 1097 550 247 101 36 chr15 67156644 67156812 -36338162 - L1_Rod LINE L1 -197 5650 5472 2 1097 37493 63 3 4 chr15 67157186 67163381 -36331593 - L1Md_F3 LINE L1 -14 6570 446 2 1097 459 0 0 0 chr15 67163944 67163995 -36330979 + (GA)n Simple_repeat Simple_repeat 1 51 0 2 1097 803 138 0 7 chr15 67163991 67164130 -36330844 + (GAA)n Simple_repeat Simple_repeat 3 140 0 2 1097 247 362 98 80 chr15 67166868 67167144 -36327830 + MLT1H1 LTR MaLR 69 349 -206 2 1097 699 311 35 35 chr15 67167283 67167510 -36327464 + Tigger7 DNA MER2_type 67 293 -2198 2 1097 295 288 0 0 chr15 67167505 67167571 -36327403 + Tigger7 DNA MER2_type 2405 2470 -21 2 1097 402 187 17 50 chr15 67168970 67169150 -36325824 + CT-rich Low_complexity Low_complexity 4 177 0 2 1097 240 35 0 0 chr15 67170663 67170692 -36324282 + (ATTTG)n Simple_repeat Simple_repeat 4 32 0 2 1097 684 260 58 83 chr15 67170918 67171195 -36323779 + MER2 DNA MER2_type 75 344 -1 2 1097 337 254 96 101 chr15 67171422 67171610 -36323364 + RMER10A LTR ERVL 13 199 -243 2 1097 1099 139 16 11 chr15 67171614 67171803 -36323171 - B2_Mm2 SINE B2 -5 190 1 2 1097 1227 48 0 7 chr15 67171835 67171982 -36322992 - B1_Mus1 SINE Alu -2 146 1 2 1097 513 192 0 0 chr15 67172018 67172143 -36322831 + CT-rich Low_complexity Low_complexity 2 126 0 2 1097 262 271 71 30 chr15 67172195 67172294 -36322680 + RMER10A LTR ERVL 315 417 -25 2 1097 877 272 58 80 chr15 67172316 67172466 -36322508 + MLT1A0 LTR MaLR 11 167 -198 2 1097 1737 16 0 0 chr15 67172466 67172658 -36322316 + B2_Mm1a SINE B2 2 193 0 2 1097 877 272 58 80 chr15 67172658 67172870 -36322104 + MLT1A0 LTR MaLR 168 365 0 2 1097 264 59 0 0 chr15 67175738 67175772 -36319202 + (CCA)n Simple_repeat Simple_repeat 3 36 0 2 1097 956 132 0 0 chr15 67176212 67176348 -36318626 - B1_Mus1 SINE Alu -10 138 3 2 1097 4490 134 51 6 chr15 67176571 67177276 -36317698 + RMER19A LTR ERVK 1 737 0 2 1097 306 0 0 0 chr15 67177908 67177942 -36317032 + (TC)n Simple_repeat Simple_repeat 1 34 0 2 1097 424 278 0 0 chr15 67178002 67178092 -36316882 - RSINE1 SINE B4 -2 163 74 2 1097 461 239 25 25 chr15 67178740 67178860 -36316114 + MTD LTR MaLR 1 120 -299 2 1097 7875 58 1 9 chr15 67178863 67180110 -36314864 - L1Md_F2 LINE L1 -12 6570 5338 2 1097 3279 110 2 2 chr15 67180097 67180552 -36314422 - L1Md_F2 LINE L1 -5796 820 366 2 1097 1020 271 0 17 chr15 67180558 67180798 -36314176 + MTD LTR MaLR 111 346 -73 2 1097 832 281 135 30 chr15 67181267 67181630 -36313344 + MLT1A1 LTR MaLR 8 408 0 2 1097 202 270 43 30 chr15 67182009 67182173 -36312801 + (TCTA)n Simple_repeat Simple_repeat 4 169 0 2 1097 232 206 15 31 chr15 67182026 67182091 -36312883 + (CAT)n Simple_repeat Simple_repeat 2 65 0 2 1097 265 295 10 93 chr15 67182247 67182344 -36312630 + MT2B LTR ERVL 169 257 -344 2 1097 664 197 0 0 chr15 67182260 67182377 -36312597 + B1_Mus1 SINE Alu 20 136 -12 2 1097 234 0 0 0 chr15 67182377 67182403 -36312571 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 2 1097 2442 139 8 83 chr15 67182497 67182976 -36311998 + RMER6B LTR ERVK 1 443 -18 2 1097 240 191 29 14 chr15 67182995 67183064 -36311910 + Charlie2a DNA MER1_type 1577 1646 -1215 2 1097 22 0 0 0 chr15 67183180 67183202 -36311772 + AT_rich Low_complexity Low_complexity 1 22 0 2 1097 703 206 27 32 chr15 67183670 67183856 -36311118 - RMER15 LTR ERVL -348 227 43 2 1097 1259 247 58 28 chr15 67184053 67184452 -36310522 - L1MB3 LINE L1 -299 5884 5474 2 1097 222 308 240 6 chr15 67184693 67184876 -36310098 + L2 LINE L2 2473 2698 -721 2 1097 335 349 132 37 chr15 67185250 67185628 -36309346 - MLT1C LTR MaLR 0 467 54 2 1097 335 313 112 45 chr15 67186629 67186853 -36308121 - MLT1C LTR MaLR 0 467 229 2 1097 198 263 73 73 chr15 67187038 67187161 -36307813 + MIR SINE MIR 109 231 -31 2 1097 600 309 70 0 chr15 67187416 67187617 -36307357 + MTE2b LTR MaLR 1 215 -164 2 1097 235 193 17 34 chr15 67189800 67189859 -36305115 + (TGGG)n Simple_repeat Simple_repeat 3 60 0 2 1097 214 309 63 21 chr15 67190969 67191111 -36303863 + MIRb SINE MIR 59 206 -62 2 1097 258 284 14 0 chr15 67191664 67191738 -36303236 - ORR1E LTR MaLR -16 363 289 2 1097 286 288 0 0 chr15 67192000 67192073 -36302901 + RMER10B LTR ERVL 269 341 -57 2 1097 849 278 43 28 chr15 67192126 67192381 -36302593 - ORR1E LTR MaLR -100 259 1 2 1097 226 208 0 40 chr15 67192921 67192996 -36301978 + G-rich Low_complexity Low_complexity 3 74 0 2 1097 239 253 48 12 chr15 67193504 67193588 -36301386 - MER58A DNA MER1_type -87 137 51 2 1097 1630 230 47 11 chr15 67195302 67195663 -36299311 + MTEb LTR MaLR 3 376 -3 2 1097 230 243 103 78 chr15 67195677 67195793 -36299181 - MIR SINE MIR -46 162 44 2 1097 186 331 86 22 chr15 67196780 67196919 -36298055 - MIRb SINE MIR -102 166 19 2 1097 1548 143 24 31 chr15 67198483 67198771 -36296203 + ORR1C2 LTR MaLR 99 384 0 2 1097 233 332 45 79 chr15 67199683 67199974 -36295000 + RMER10A LTR ERVL 18 298 -144 2 1097 216 0 0 0 chr15 67200019 67200043 -36294931 + (CTA)n Simple_repeat Simple_repeat 2 25 0 2 1097 1293 83 0 0 chr15 67200045 67200225 -36294749 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 2 1097 401 95 16 0 chr15 67200226 67200289 -36294685 + (CCCCCT)n Simple_repeat Simple_repeat 6 69 0 2 1097 263 234 0 13 chr15 67200289 67200367 -36294607 + CT-rich Low_complexity Low_complexity 2 78 0 2 1097 1456 180 44 19 chr15 67200401 67200718 -36294256 - ORR1D1 LTR MaLR -49 325 1 2 1097 1411 219 58 51 chr15 67201328 67201760 -36293214 - Lx8 LINE L1 0 7473 7039 2 1097 467 275 157 13 chr15 67201762 67201998 -36292976 + L1MA6 LINE L1 5749 6018 -282 2 1097 478 298 8 0 chr15 67202000 67202124 -36292850 + RSINE1 SINE B4 4 128 -37 2 1097 423 337 62 31 chr15 67203338 67203531 -36291443 + MLT2B2 LTR ERVL 364 562 0 2 1097 320 273 56 35 chr15 67203936 67204080 -36290894 + L1MA6 LINE L1 6155 6301 -2 2 1097 269 349 95 74 chr15 67204133 67204458 -36290516 - MLT1K LTR MaLR -223 372 41 2 1097 190 298 0 17 chr15 67204726 67204784 -36290190 + MIR SINE MIR 175 231 -31 2 1097 530 289 52 36 chr15 67205144 67205338 -36289636 - MER63A DNA AcHobo -8 202 6 2 1097 201 372 40 0 chr15 67205769 67205917 -36289057 + MIR SINE MIR 70 223 -39 2 1097 3287 175 15 22 chr15 67206103 67206152 -36288822 - Lx2B LINE L1 -3 6997 6958 2 1097 2210 127 12 0 chr15 67206152 67206475 -36288499 - ORR1A2 LTR MaLR 0 327 1 2 1097 3287 175 15 22 chr15 67206475 67207027 -36287947 - Lx2B LINE L1 -43 6957 6400 2 1097 417 169 0 0 chr15 67207028 67207105 -36287869 - Lx2B LINE L1 -820 6180 6104 2 1097 466 283 158 4 chr15 67207315 67207549 -36287425 - RMER15 LTR ERVL -3 572 303 2 1097 338 265 100 41 chr15 67207962 67208182 -36286792 - CYRA11_Mm Unknown Y-chromosome -213 404 172 2 1097 789 170 0 0 chr15 67208036 67208183 -36286791 + URR1A DNA MER1_type 80 226 0 2 1097 528 277 53 38 chr15 67209794 67210060 -36284914 - L1MB2 LINE L1 -106 6065 5796 2 1097 405 269 9 27 chr15 67210060 67210171 -36284803 + Lx5 LINE L1 6899 7007 -43 2 1097 957 172 0 0 chr15 67210208 67210388 -36284586 + GA-rich Low_complexity Low_complexity 1 180 0 2 1097 669 194 6 12 chr15 67210422 67210594 -36284380 + GA-rich Low_complexity Low_complexity 3 173 0 2 1097 443 281 109 38 chr15 67210601 67210812 -36284162 - L1MB2 LINE L1 -399 5784 5559 2 1097 800 252 133 4 chr15 67211711 67211966 -36283008 - B4A SINE B4 -4 288 1 2 1097 245 357 90 59 chr15 67212752 67213008 -36281966 - MLT1J2 LTR MaLR -2 446 183 2 1097 2056 136 20 14 chr15 67213015 67213372 -36281602 + RLTR15 LTR ERVK 1 359 0 2 1097 922 192 14 19 chr15 67213376 67213588 -36281386 - RLTR12A LTR ERVK -23 545 335 2 1097 378 0 0 0 chr15 67213641 67213683 -36281291 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 1097 1528 196 13 16 chr15 67213683 67213999 -36280975 - RLTR12A LTR ERVK -253 315 1 2 1097 516 294 232 18 chr15 67213999 67214279 -36280695 + MTEa LTR MaLR 38 377 -2 2 1097 30 27 0 0 chr15 67214437 67214474 -36280500 + AT_rich Low_complexity Low_complexity 1 37 0 2 1097 258 32 0 0 chr15 67215138 67215169 -36279805 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1097 9136 9 0 0 chr15 67215190 67216403 -36278571 - L1Md_T LINE L1 0 6582 5370 2 1097 7779 14 0 3 chr15 67216403 67217299 -36277675 + L1Md_Gf LINE L1 297 1289 -5371 2 1097 471 139 37 9 chr15 67221716 67221825 -36273149 + (TATATG)n Simple_repeat Simple_repeat 2 113 0 3 1097 712 288 42 0 chr15 67222762 67222840 -36272134 + ID SINE ID 1 86 -138 3 1097 274 333 129 0 chr15 67222840 67222972 -36272002 + B1F SINE Alu 1 149 0 3 1097 201 175 0 0 chr15 67222977 67223017 -36271957 + A-rich Low_complexity Low_complexity 1 40 0 3 1097 1192 50 0 0 chr15 67223361 67223501 -36271473 + B1_Mm SINE Alu 2 141 -6 3 1097 198 0 0 0 chr15 67223504 67223526 -36271448 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 1097 270 0 0 0 chr15 67223841 67223871 -36271103 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1097 4465 24 0 6 chr15 67224861 67225372 -36269602 + L1Md_T LINE L1 6075 6582 0 3 1097 723 283 42 0 chr15 67225596 67225674 -36269300 + ID SINE ID 1 86 -138 3 1097 286 326 129 0 chr15 67225674 67225806 -36269168 + B1F SINE Alu 1 149 0 3 1097 219 167 0 0 chr15 67225811 67225853 -36269121 + A-rich Low_complexity Low_complexity 1 42 0 3 1097 249 171 0 0 chr15 67226279 67226320 -36268654 + B2_Mm2 SINE B2 2 42 -153 3 1097 244 224 106 10 chr15 67226572 67226693 -36268281 + RLTR13D3 LTR ERVK 981 1072 -42 3 1097 1513 292 102 19 chr15 67227863 67228400 -36266574 + Lx8 LINE L1 6892 7473 0 3 1097 562 293 68 57 chr15 67228407 67228743 -36266231 - L1MB7 LINE L1 -3 6181 5842 3 1097 255 219 31 0 chr15 67228798 67228862 -36266112 + (TATG)n Simple_repeat Simple_repeat 1 66 0 3 1097 321 300 54 9 chr15 67228862 67228973 -36266001 - MTEa LTR MaLR -9 370 255 3 1097 274 336 35 28 chr15 67229024 67229165 -36265809 - MTEa LTR MaLR -154 205 64 3 1097 351 311 0 0 chr15 67230784 67230890 -36264084 + MER117 DNA MER1_type 76 181 -16 3 1097 351 0 0 0 chr15 67231223 67231262 -36263712 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1097 2059 174 46 5 chr15 67231266 67231658 -36263316 - MTC LTR MaLR -9 412 5 3 1097 204 125 0 0 chr15 67231659 67231691 -36263283 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 1097 234 91 0 0 chr15 67231692 67231725 -36263249 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1097 439 301 53 94 chr15 67233007 67233444 -36261530 + RMER10A LTR ERVL 12 430 -12 3 1097 187 250 0 0 chr15 67233642 67233690 -36261284 + L2a LINE L2 3377 3424 -2 3 1097 324 0 0 0 chr15 67234180 67234216 -36260758 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1097 441 0 0 0 chr15 67234638 67234687 -36260287 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 1097 333 0 0 0 chr15 67234687 67234723 -36260251 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1097 606 268 88 34 chr15 67234798 67235003 -36259971 - B4A SINE B4 -75 217 2 3 1097 210 155 33 49 chr15 67236050 67236111 -36258863 + A-rich Low_complexity Low_complexity 2 61 0 3 1097 200 143 24 0 chr15 67236355 67236397 -36258577 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1097 241 322 40 33 chr15 67236474 67236625 -36258349 - RMER12 LTR ERVK -467 855 704 3 1097 435 38 0 0 chr15 67237575 67237628 -36257346 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1097 27 96 0 0 chr15 67238156 67238239 -36256735 + AT_rich Low_complexity Low_complexity 1 83 0 3 1097 195 69 0 0 chr15 67238247 67238276 -36256698 + (TAA)n Simple_repeat Simple_repeat 2 30 0 3 1097 21 0 0 0 chr15 67238462 67238483 -36256491 + AT_rich Low_complexity Low_complexity 1 21 0 3 1097 336 331 53 13 chr15 67238491 67238641 -36256333 - MIR SINE MIR -79 183 28 3 1097 189 0 0 0 chr15 67239342 67239363 -36255611 + (TC)n Simple_repeat Simple_repeat 2 22 0 3 137 4844 82 0 0 chr15 67239367 67240000 -36254974 - L1_Mus4 LINE L1 -13 6623 5991 3 1098 582 318 64 13 chr15 67240989 67241225 -36253749 - MER58B DNA MER1_type -92 249 2 3 1098 510 57 0 0 chr15 67241887 67241957 -36253017 + (TG)n Simple_repeat Simple_repeat 2 71 0 3 1098 234 91 0 0 chr15 67242409 67242442 -36252532 + (T)n Simple_repeat Simple_repeat 1 33 0 3 1098 1181 264 36 58 chr15 67242465 67242827 -36252147 - ORR1E LTR MaLR -5 354 1 3 1098 846 264 18 49 chr15 67242865 67243088 -36251886 + B3 SINE B2 1 216 0 3 1098 649 278 85 54 chr15 67243136 67243467 -36251507 - MTEa LTR MaLR 0 379 39 3 1098 427 292 48 14 chr15 67243745 67243891 -36251083 + ID_B1 SINE B4 3 153 -71 3 1098 405 0 0 0 chr15 67244450 67244495 -36250479 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1098 183 233 0 0 chr15 67245134 67245177 -36249797 - L2 LINE L2 -351 3068 3026 3 1098 278 292 155 27 chr15 67245655 67245803 -36249171 - LTR16A LTR ERVL -272 179 13 3 1098 1058 264 121 3 chr15 67245925 67246256 -36248718 + MTE2b LTR MaLR 1 370 -9 3 1098 336 269 32 0 chr15 67247637 67247730 -36247244 - MIR SINE MIR -64 144 49 3 1098 194 289 10 91 chr15 67249904 67250003 -36244971 + MIRb SINE MIR 82 172 -96 3 1098 1534 177 25 106 chr15 67250159 67250564 -36244410 + RMER5 LTR ERV1 13 384 -150 3 1098 1618 164 22 36 chr15 67250567 67250845 -36244129 - Lx5 LINE L1 -195 6855 6582 3 1098 333 240 51 20 chr15 67250845 67250943 -36244031 + RMER5 LTR ERV1 423 523 -11 3 1098 181 384 20 20 chr15 67251255 67251404 -36243570 + L2a LINE L2 3269 3417 -9 3 1098 248 272 181 14 chr15 67252382 67252520 -36242454 - MER3 DNA MER1_type -2 207 47 3 1098 1024 314 31 3 chr15 67252946 67253265 -36241709 + MTE2b LTR MaLR 13 340 -39 3 1098 204 282 83 14 chr15 67253408 67253480 -36241494 + MIRb SINE MIR 89 165 -103 3 1098 269 359 68 68 chr15 67254742 67255139 -36239835 - LTR33A LTR ERVL -2 518 122 3 1098 494 349 31 13 chr15 67256271 67256495 -36238479 + MER2 DNA MER2_type 112 339 -6 3 1098 25 0 0 0 chr15 67256932 67256957 -36238017 + AT_rich Low_complexity Low_complexity 1 25 0 3 1098 436 303 13 27 chr15 67257299 67257448 -36237526 - MER58A DNA MER1_type -50 174 28 3 1098 906 295 0 81 chr15 67258863 67259173 -36235801 + B4 SINE B4 4 288 -4 3 1098 501 80 0 0 chr15 67259198 67259273 -36235701 + (CA)n Simple_repeat Simple_repeat 2 76 0 3 1098 279 323 45 90 chr15 67259653 67259830 -36235144 - HERV16-int LTR ERVL -1915 3081 2913 3 1098 579 278 81 30 chr15 67261489 67261686 -36233288 - MTD LTR MaLR -201 218 12 3 1098 468 143 0 0 chr15 67261693 67261777 -36233197 + (CA)n Simple_repeat Simple_repeat 2 85 0 3 1098 809 211 0 0 chr15 67262814 67262961 -36232013 - B1_Mur2 SINE Alu 0 149 3 3 1098 232 324 45 0 chr15 67263111 67263222 -36231752 - PB1D10 SINE Alu -1 116 1 3 1098 241 282 28 0 chr15 67263523 67263594 -36231380 + MTEa LTR MaLR 294 366 -13 3 1098 474 101 0 0 chr15 67264211 67264280 -36230694 + (TGAG)n Simple_repeat Simple_repeat 3 71 0 3 1098 315 317 99 8 chr15 67264303 67264424 -36230550 + B1F SINE Alu 6 137 -12 3 1098 1449 261 24 9 chr15 67264443 67264780 -36230194 + RMER1B Other Other 50 391 -675 3 1098 1811 145 45 24 chr15 67264776 67265065 -36229909 + RMER1B Other Other 551 845 -221 3 1098 333 0 0 0 chr15 67265082 67265119 -36229855 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1098 2729 236 76 11 chr15 67265120 67265819 -36229155 - Lx7 LINE L1 -991 6705 5962 3 1098 825 284 61 53 chr15 67267549 67267951 -36227023 - MTE2a LTR MaLR -14 405 1 3 1098 231 252 9 18 chr15 67269063 67269176 -36225798 + GA-rich Low_complexity Low_complexity 3 114 0 3 1098 549 0 0 0 chr15 67270243 67270304 -36224670 + (TTTC)n Simple_repeat Simple_repeat 2 62 0 3 1098 414 88 0 0 chr15 67270842 67270910 -36224064 + (CA)n Simple_repeat Simple_repeat 2 69 0 3 1098 757 280 84 48 chr15 67271138 67271220 -36223754 + MLT2B4 LTR ERVL 1 83 -473 3 1098 997 187 112 15 chr15 67271220 67271426 -36223548 + URR1A DNA MER1_type 1 226 0 3 1098 757 280 84 48 chr15 67271426 67271737 -36223237 + MLT2B4 LTR ERVL 84 408 -148 3 1098 289 198 0 58 chr15 67271776 67271862 -36223112 + (TCTCTG)n Simple_repeat Simple_repeat 4 84 0 3 1098 702 306 72 62 chr15 67272949 67273350 -36221624 - MTD LTR MaLR -14 405 1 3 1098 2222 78 3 3 chr15 67273527 67273837 -36221137 + ORR1A2 LTR MaLR 10 319 -8 3 1098 540 45 0 0 chr15 67273992 67274059 -36220915 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 1098 477 0 0 0 chr15 67274592 67274645 -36220329 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1098 297 0 0 0 chr15 67274645 67274677 -36220297 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1098 302 176 0 0 chr15 67274951 67275002 -36219972 + Lx5 LINE L1 6856 6906 -144 3 1098 384 22 0 0 chr15 67275270 67275315 -36219659 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1098 423 0 0 0 chr15 67275315 67275361 -36219613 + (GA)n Simple_repeat Simple_repeat 1 47 0 3 1098 306 293 36 0 chr15 67275575 67275677 -36219297 - B1F SINE Alu -16 133 24 3 1098 217 256 39 16 chr15 67276158 67276240 -36218734 + (TATG)n Simple_repeat Simple_repeat 3 86 0 3 1098 329 0 24 0 chr15 67276240 67276281 -36218693 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1098 217 256 39 16 chr15 67276281 67276325 -36218649 + (TATG)n Simple_repeat Simple_repeat 2 46 0 3 1098 275 278 44 15 chr15 67276390 67276525 -36218449 - MER2 DNA MER2_type -135 210 72 3 1098 195 69 0 0 chr15 67276737 67276766 -36218208 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 3 1098 344 152 0 15 chr15 67277764 67277831 -36217143 + (TTA)n Simple_repeat Simple_repeat 3 68 0 3 1098 360 322 129 55 chr15 67278764 67279124 -36215850 + L1MEf LINE L1 844 1232 -5177 3 1098 775 98 8 8 chr15 67279417 67279541 -36215433 + (TCTCC)n Simple_repeat Simple_repeat 2 125 0 3 1098 414 0 0 0 chr15 67279546 67279592 -36215382 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1098 423 0 0 0 chr15 67280167 67280214 -36214760 + (TC)n Simple_repeat Simple_repeat 1 47 0 4 1098 852 262 115 10 chr15 67281223 67281528 -36213446 + L1_Mur2 LINE L1 518 854 -6232 4 1098 2200 140 4 7 chr15 67281524 67282084 -36212890 + L1_Mur2 LINE L1 1088 1645 -4232 4 1098 2748 148 16 6 chr15 67282079 67282577 -36212397 + L1_Mur2 LINE L1 4981 5483 -394 4 1098 691 236 77 17 chr15 67283581 67283763 -36211211 - B3A SINE B2 -9 186 5 4 1098 2750 197 82 82 chr15 67283895 67284697 -36210277 + RLTR40 LTR ERVK 3 804 -13 4 1098 1244 203 167 108 chr15 67284810 67285297 -36209677 + MT2B LTR ERVL 1 547 -54 4 1098 444 19 0 0 chr15 67285297 67285350 -36209624 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1098 329 109 18 0 chr15 67285350 67285404 -36209570 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1098 1244 203 167 108 chr15 67285404 67285479 -36209495 + MT2B LTR ERVL 548 596 -5 4 1098 396 59 0 0 chr15 67285583 67285634 -36209340 + (CATA)n Simple_repeat Simple_repeat 2 52 0 4 1098 229 288 133 18 chr15 67285639 67285752 -36209222 - MIR SINE MIR -49 219 90 4 1098 360 0 0 0 chr15 67287199 67287239 -36207735 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1098 2340 35 11 7 chr15 67288483 67288769 -36206205 + L1Md_F2 LINE L1 6294 6580 -2 4 1098 1776 158 14 0 chr15 67288825 67289122 -36205852 + ORR1A4 LTR MaLR 1 301 -28 4 1098 213 39 0 0 chr15 67289497 67289523 -36205451 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1098 504 0 0 0 chr15 67290941 67290997 -36203977 + (GA)n Simple_repeat Simple_repeat 2 57 0 4 1098 207 0 0 0 chr15 67292434 67292457 -36202517 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1098 603 204 83 8 chr15 67293092 67293196 -36201778 + B1_Mur1 SINE Alu 1 104 -45 4 1098 531 0 0 0 chr15 67293196 67293255 -36201719 + (TAA)n Simple_repeat Simple_repeat 2 60 0 4 1098 603 204 83 8 chr15 67293255 67293283 -36201691 + B1_Mur1 SINE Alu 105 143 -6 4 1098 204 132 0 26 chr15 67293823 67293862 -36201112 + G-rich Low_complexity Low_complexity 5 42 0 4 1098 362 281 93 87 chr15 67294530 67294713 -36200261 - MLT1G1 LTR MaLR -1 578 395 4 1098 295 377 46 13 chr15 67294706 67294859 -36200115 - MLT1G1 LTR MaLR -313 236 79 4 1098 484 350 27 62 chr15 67294988 67295087 -36199887 - MLT1G1-int LTR MaLR -64 1345 1252 4 1098 1751 238 44 35 chr15 67295087 67295609 -36199365 - RLTR11A2 LTR ERVK 0 527 1 4 1098 484 350 27 62 chr15 67295609 67295768 -36199206 - MLT1G1-int LTR MaLR -158 1251 1096 4 1098 758 279 44 118 chr15 67295919 67296326 -36198648 + MTEa LTR MaLR 1 377 -2 4 1098 269 299 84 35 chr15 67296379 67296521 -36198453 + MER45B DNA Tip100 874 1022 -18 4 1098 225 0 0 0 chr15 67296526 67296551 -36198423 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1098 315 279 13 0 chr15 67297621 67297700 -36197274 - ID4_ SINE ID -2 81 2 4 1098 210 143 0 0 chr15 67298753 67298788 -36196186 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 1098 267 368 57 0 chr15 67299669 67299775 -36195199 - LTR16A1 LTR ERVL -5 451 340 4 1098 366 85 0 0 chr15 67299823 67299882 -36195092 + (CACAA)n Simple_repeat Simple_repeat 2 60 0 4 1098 428 308 23 8 chr15 67300019 67300150 -36194824 + MER96 DNA hAT 42 174 -1 4 1098 1684 21 0 0 chr15 67300290 67300481 -36194493 - B2_Mm1a SINE B2 -1 192 2 4 1098 314 188 0 0 chr15 67300583 67300647 -36194327 + Lx9 LINE L1 7579 7642 -2 4 1098 270 215 127 0 chr15 67300713 67300834 -36194140 - L1M5 LINE L1 -669 5495 5349 4 1098 354 45 0 0 chr15 67300876 67300920 -36194054 + (TC)n Simple_repeat Simple_repeat 2 45 0 4 1098 285 89 0 0 chr15 67300920 67300964 -36194010 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1098 542 224 114 11 chr15 67301411 67301587 -36193387 - B3A SINE B2 -4 194 1 4 1098 515 315 11 80 chr15 67302059 67302235 -36192739 - RSINE1 SINE B4 0 165 2 4 1098 615 227 81 14 chr15 67302302 67302525 -36192449 - L1MC LINE L1 -2006 5779 5542 4 1098 2597 152 12 2 chr15 67302528 67302937 -36192037 + MTC LTR MaLR 1 413 -8 4 1098 229 316 57 37 chr15 67302942 67303188 -36191786 - L1MC LINE L1 -794 5539 5289 4 1098 5412 76 58 117 chr15 67303279 67304228 -36190746 + RLTR13B1 LTR ERVK 1 893 0 4 1098 1473 39 0 0 chr15 67304370 67304550 -36190424 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 4 1098 252 59 0 0 chr15 67304551 67304585 -36190389 + (TTTTC)n Simple_repeat Simple_repeat 1 34 0 4 1098 893 258 13 64 chr15 67304585 67304896 -36190078 - Lx8 LINE L1 -115 7358 7064 4 1098 425 302 48 22 chr15 67305085 67305312 -36189662 - Lx9 LINE L1 -196 7448 7216 4 1098 466 217 84 15 chr15 67305370 67305501 -36189473 + Lx9 LINE L1 5830 5969 -1675 4 1098 1353 297 61 4 chr15 67305767 67306241 -36188733 + Lx9 LINE L1 6361 6861 -783 4 1098 261 288 14 0 chr15 67306241 67306314 -36188660 - Lx8 LINE L1 -592 6881 6808 4 1098 358 252 24 0 chr15 67306452 67306575 -36188399 - L1MC LINE L1 -1035 5111 4986 4 1098 357 293 72 32 chr15 67306573 67306823 -36188151 - L1M5 LINE L1 -1106 5040 4781 4 1098 357 347 0 8 chr15 67306853 67306880 -36188094 + ID SINE ID 56 81 -143 4 1098 427 262 27 1 chr15 67306880 67306990 -36187984 + B1F1 SINE Alu 1 109 -8 4 1098 577 306 25 12 chr15 67307087 67307249 -36187725 + RSINE1 SINE B4 2 165 0 4 1098 690 134 17 0 chr15 67307455 67307574 -36187400 + URR1B DNA MER1_type 98 218 -7 4 1098 318 243 74 9 chr15 67307594 67307702 -36187272 - L1M5 LINE L1 -1703 4443 4329 4 1098 726 236 78 208 chr15 67308593 67309026 -36185948 - MTE2a LTR MaLR 0 379 3 4 1098 213 200 67 0 chr15 67310622 67310667 -36184307 - MIR SINE MIR -101 161 114 4 1098 518 291 57 63 chr15 67311348 67311506 -36183468 - MTEa LTR MaLR -222 157 1 4 1098 1381 245 88 14 chr15 67312151 67312573 -36182401 - Lx6 LINE L1 -26 7434 6982 4 1098 760 300 36 46 chr15 67313485 67313897 -36181077 + MLT1A1 LTR MaLR 1 408 0 4 1098 210 306 135 0 chr15 67314289 67314400 -36180574 - L2a LINE L2 -18 3408 3283 4 1098 953 300 73 13 chr15 67314420 67314721 -36180253 + MER2 DNA MER2_type 2 320 -25 4 1098 315 271 0 76 chr15 67315456 67315548 -36179426 - B3A SINE B2 -113 85 1 4 1098 276 326 51 22 chr15 67315800 67315938 -36179036 - PB1D10 SINE Alu 0 149 8 4 1098 298 316 122 70 chr15 67316097 67316540 -36178434 - RMER5 LTR ERV1 -47 487 22 4 1098 267 157 0 0 chr15 67317560 67317630 -36177344 + A-rich Low_complexity Low_complexity 1 70 0 4 1098 235 247 26 13 chr15 67317814 67317892 -36177082 + (TG)n Simple_repeat Simple_repeat 1 79 0 4 1098 439 310 77 0 chr15 67317892 67318021 -36176953 - B4A SINE B4 -124 168 31 4 1098 975 158 5 0 chr15 67318549 67318770 -36176204 + CT-rich Low_complexity Low_complexity 1 221 0 4 1098 385 298 44 30 chr15 67319177 67319312 -36175662 + RLTR14 LTR ERV1 246 382 0 4 1098 642 294 75 34 chr15 67319314 67319581 -36175393 - B4A SINE B4 -14 278 1 4 1098 227 171 244 26 chr15 67319970 67320048 -36174926 - MIRb SINE MIR -1 267 173 4 1098 22 35 0 0 chr15 67322211 67322240 -36172734 + AT_rich Low_complexity Low_complexity 1 29 0 4 1098 3542 314 50 25 chr15 67322280 67322409 -36172565 - Lx8 LINE L1 -6 7467 7327 4 1098 252 59 0 0 chr15 67322409 67322443 -36172531 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 4 1098 3542 314 50 25 chr15 67322443 67323907 -36171067 - Lx8 LINE L1 -147 7326 5835 4 1098 405 0 0 0 chr15 67323920 67323965 -36171009 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1098 474 303 72 73 chr15 67323965 67324243 -36170731 - B4 SINE B4 -18 274 8 4 1098 345 100 0 0 chr15 67325306 67325356 -36169618 + (CAA)n Simple_repeat Simple_repeat 3 52 0 4 1098 574 269 243 17 chr15 67325486 67325774 -36169200 - L2 LINE L2 -590 2829 2477 4 1098 325 361 48 5 chr15 67325777 67325986 -36168988 - L2 LINE L2 -1063 2356 2139 4 1098 265 340 39 20 chr15 67326044 67326146 -36168828 - LTR16A LTR ERVL 0 451 348 4 1098 303 282 39 0 chr15 67326558 67326636 -36168338 - B1_Mus2 SINE Alu -66 81 1 4 1098 321 287 41 41 chr15 67327523 67327621 -36167353 + RMER30 DNA MER1_type 1 98 -104 4 1098 363 295 0 0 chr15 67327621 67327750 -36167224 + (TA)n Simple_repeat Simple_repeat 2 130 0 4 1098 309 207 0 0 chr15 67327750 67327808 -36167166 + RMER30 DNA MER1_type 106 163 -39 4 1098 25978 72 103 18 chr15 67328431 67334002 -36160972 - L1Md_F2 LINE L1 -12 6570 483 4 1098 511 223 12 0 chr15 67334015 67334129 -36160845 - B3 SINE B2 0 198 80 4 1098 888 77 131 0 chr15 67334291 67334421 -36160553 - B1_Mus1 SINE Alu 0 148 2 4 1098 382 331 13 33 chr15 67334567 67334717 -36160257 - RMER15 LTR ERVL -130 445 299 4 1098 1104 334 63 52 chr15 67334932 67335770 -36159204 - RMER15-int LTR ERVL -8 4991 4145 4 1098 257 392 0 10 chr15 67336125 67336223 -36158751 - RMER15-int LTR ERVL -3190 1809 1713 4 1098 237 261 68 55 chr15 67336354 67336427 -36158547 + B4A SINE B4 1 74 -218 4 1098 948 304 96 69 chr15 67336435 67336652 -36158322 - RMER15-int LTR ERVL -3418 1581 1380 4 1098 376 104 0 0 chr15 67336652 67336719 -36158255 - L1_Mus3 LINE L1 -3 6635 6569 4 1098 948 304 96 69 chr15 67336719 67337084 -36157890 - RMER15-int LTR ERVL -3620 1379 983 4 1098 259 350 16 16 chr15 67337148 67337273 -36157701 - RMER15-int LTR ERVL -4163 836 712 4 1098 624 313 69 55 chr15 67337515 67337894 -36157080 - RMER15-int LTR ERVL -4601 398 15 4 1098 512 342 79 15 chr15 67337913 67338180 -36156794 - RMER15 LTR ERVL -16 559 276 4 1098 419 354 164 11 chr15 67339498 67339729 -36155245 - MER82 DNA MER2_type -10 643 371 4 1098 336 24 0 0 chr15 67339729 67339770 -36155204 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1098 532 304 266 22 chr15 67339770 67340073 -36154901 - MER82 DNA MER2_type -283 370 1 4 1098 820 177 210 0 chr15 67341742 67341928 -36153046 + URR1B DNA MER1_type 1 225 0 4 1098 249 284 61 40 chr15 67342569 67342668 -36152306 - LTR33 LTR ERVL -22 493 393 4 1098 567 43 0 0 chr15 67342871 67342941 -36152033 + (CA)n Simple_repeat Simple_repeat 2 71 0 4 1098 1244 114 11 0 chr15 67343166 67343342 -36151632 + B2_Mm1t SINE B2 2 179 -14 4 1098 340 121 4 36 chr15 67343374 67343436 -36151538 + B2_Mm2 SINE B2 47 109 -84 4 1098 216 97 0 0 chr15 67343456 67343487 -36151487 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 4 1098 489 235 0 0 chr15 67344955 67345108 -36149866 + (TG)n Simple_repeat Simple_repeat 1 153 0 4 1098 209 108 27 0 chr15 67345165 67345202 -36149772 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1098 440 269 18 9 chr15 67345262 67345371 -36149603 - RSINE1 SINE B4 -51 114 5 4 1098 525 291 7 22 chr15 67345460 67345597 -36149377 - ORR1E LTR MaLR -224 135 1 4 1098 203 373 62 44 chr15 67345923 67346150 -36148824 - MIRb SINE MIR -19 249 19 4 1098 306 0 0 0 chr15 67346546 67346580 -36148394 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 4 1098 1124 244 34 128 chr15 67348292 67348705 -36146269 - MTE2b LTR MaLR -1 378 5 4 1098 301 318 46 18 chr15 67350254 67350363 -36144611 + Arthur1A DNA Tip100 66 177 0 4 1098 190 200 28 28 chr15 67350620 67350692 -36144282 + (CACAG)n Simple_repeat Simple_repeat 3 74 0 4 1098 1467 260 51 8 chr15 67350718 67351113 -36143861 + MTD LTR MaLR 8 419 0 4 1098 368 241 121 21 chr15 67351504 67351644 -36143330 + MER58A DNA MER1_type 28 181 -43 4 1098 255 103 0 0 chr15 67351661 67351700 -36143274 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1098 415 318 46 5 chr15 67352951 67353169 -36141805 - L1MB3 LINE L1 -4 6179 5953 5 1098 378 221 80 0 chr15 67353341 67353480 -36141494 - L1MB3 LINE L1 -505 5678 5529 5 1098 848 53 9 0 chr15 67353494 67353608 -36141366 + (TTCC)n Simple_repeat Simple_repeat 2 116 0 5 1098 302 215 13 0 chr15 67353608 67353687 -36141287 + CT-rich Low_complexity Low_complexity 1 80 0 5 1098 910 280 81 50 chr15 67353689 67354184 -36140790 - L1MB3 LINE L1 -692 5488 4981 5 1098 455 240 96 81 chr15 67354184 67354393 -36140581 + B3 SINE B2 2 213 -3 5 1098 910 297 94 51 chr15 67354393 67354652 -36140322 - L1MB3 LINE L1 -1166 4980 4692 5 1098 3329 55 0 0 chr15 67354652 67355068 -36139906 + L1Md_F3 LINE L1 6155 6570 -14 5 1098 910 297 94 51 chr15 67355068 67355464 -36139510 - L1MB3 LINE L1 -1455 4691 4283 5 1098 250 169 31 0 chr15 67355470 67355535 -36139439 + CT-rich Low_complexity Low_complexity 2 68 0 5 1098 409 291 73 71 chr15 67355574 67355768 -36139206 - L1MB3 LINE L1 -1900 4240 4063 5 1098 1186 233 60 36 chr15 67355768 67356133 -36138841 - ORR1D1 LTR MaLR 0 374 1 5 1098 409 292 68 66 chr15 67356133 67356362 -36138612 - L1MB3 LINE L1 -2078 4062 3824 5 1098 288 204 230 44 chr15 67356955 67357068 -36137906 + MLT1B LTR MaLR 6 139 -251 5 1098 520 312 72 93 chr15 67357074 67357311 -36137663 + B4A SINE B4 2 233 -59 5 1098 202 288 24 24 chr15 67357342 67357424 -36137550 + (CATA)n Simple_repeat Simple_repeat 1 82 0 5 1098 320 34 33 33 chr15 67357431 67357491 -36137483 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 1098 584 258 153 32 chr15 67358744 67359271 -36135703 + Lx7 LINE L1 5289 5909 -1787 5 1098 456 19 0 0 chr15 67359838 67359891 -36135083 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1098 1359 270 84 23 chr15 67359891 67360376 -36134598 - Lx8 LINE L1 -34 7439 6925 5 1098 298 364 20 0 chr15 67360452 67360551 -36134423 - MER81 DNA AcHobo -5 109 9 5 1098 766 258 14 19 chr15 67361428 67361641 -36133333 + B3 SINE B2 5 216 0 5 1098 3859 184 92 77 chr15 67361845 67362733 -36132241 - RMER19B LTR ERVK 0 902 1 5 1098 342 252 18 88 chr15 67362901 67363014 -36131960 - RMER12 LTR ERVK 0 1322 1218 5 1098 319 304 62 7 chr15 67363109 67363255 -36131719 - RLTR22_Mur LTR ERVK -275 1573 1420 5 1098 1347 181 127 106 chr15 67363234 67363667 -36131307 - RMER12 LTR ERVK -412 910 469 5 1098 31609 72 1 3 chr15 67363668 67368811 -36126163 + L1Md_F2 LINE L1 360 5589 -297 5 1098 7827 54 7 0 chr15 67368811 67369788 -36125186 + L1Md_F2 LINE L1 5590 6573 -12 5 1098 2237 149 35 105 chr15 67369790 67370306 -36124668 - RMER12 LTR ERVK -842 480 1 5 1098 277 221 26 13 chr15 67370482 67370560 -36124414 + CT-rich Low_complexity Low_complexity 2 80 0 5 1099 416 332 114 9 chr15 67371033 67371248 -36123726 - Lx8 LINE L1 -917 6779 6554 5 1099 252 279 0 14 chr15 67372058 67372127 -36122847 - MARNA DNA Mariner -209 377 310 5 1099 270 0 0 0 chr15 67372230 67372260 -36122714 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 1099 377 231 0 0 chr15 67372282 67372386 -36122588 - Lx9 LINE L1 -8 7636 7533 5 1099 315 276 172 0 chr15 67372426 67372589 -36122385 + Lx9 LINE L1 7223 7413 -231 5 1099 230 388 43 91 chr15 67372701 67372911 -36122063 + LTR16A1 LTR ERVL 81 285 -171 5 1099 2972 66 8 22 chr15 67372911 67373313 -36121661 - MTA_Mm LTR MaLR 0 396 1 5 1099 230 388 43 91 chr15 67373313 67373332 -36121642 + LTR16A1 LTR ERVL 286 298 -158 5 1099 513 286 76 81 chr15 67373579 67373960 -36121014 - MTEa LTR MaLR 0 379 1 5 1099 521 311 0 24 chr15 67374729 67374897 -36120077 - RSINE1 SINE B4 0 165 2 5 1099 273 338 50 34 chr15 67375390 67375569 -36119405 + MER5A DNA MER1_type 9 189 0 5 1099 630 288 19 25 chr15 67375800 67375960 -36119014 - B4A SINE B4 0 292 134 5 1099 754 168 0 0 chr15 67375973 67376098 -36118876 + Lx6 LINE L1 6760 6884 -576 5 1099 377 274 65 9 chr15 67376526 67376633 -36118341 - L2a LINE L2 -7 3419 3307 5 1099 427 349 30 12 chr15 67376909 67377077 -36117897 - MIRb SINE MIR -71 197 27 5 1099 192 359 16 41 chr15 67377170 67377292 -36117682 - MIRb SINE MIR -100 168 50 5 1099 1626 161 79 32 chr15 67377668 67378046 -36116928 - RMER1C Other Other -8 1334 939 5 1099 269 185 15 0 chr15 67378147 67378212 -36116762 + GA-rich Low_complexity Low_complexity 2 67 0 5 1099 1069 239 29 110 chr15 67379376 67379785 -36115189 + MTE2a LTR MaLR 1 376 -3 5 1099 183 250 0 0 chr15 67380412 67380448 -36114526 - MIRc SINE MIR -114 154 119 5 1099 2752 87 5 13 chr15 67380498 67380893 -36114081 + L1_Mus3 LINE L1 6247 6638 0 5 1099 308 291 12 12 chr15 67381337 67381417 -36113557 - MER2B DNA MER2_type -8 328 249 5 1099 25 51 0 0 chr15 67381569 67381608 -36113366 + AT_rich Low_complexity Low_complexity 1 39 0 5 1099 243 0 0 0 chr15 67381719 67381746 -36113228 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1099 293 254 9 3 chr15 67381765 67381869 -36113105 + Lx7 LINE L1 5762 5899 -1797 5 1099 220 358 53 0 chr15 67381946 67382041 -36112933 + MIRb SINE MIR 10 109 -159 5 1099 459 0 0 0 chr15 67382503 67382554 -36112420 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1099 1056 103 0 0 chr15 67382554 67382727 -36112247 + (GA)n Simple_repeat Simple_repeat 2 175 0 5 1099 2015 41 4 0 chr15 67382841 67383083 -36111891 - L1_Mus1 LINE L1 -4 6563 6321 5 1099 183 322 86 17 chr15 67383100 67383217 -36111757 + MIRb SINE MIR 110 234 -34 5 1099 189 26 51 26 chr15 67385409 67385448 -36109526 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 5 1099 558 253 98 49 chr15 67386878 67387061 -36107913 + MLT1D LTR MaLR 31 222 -283 5 1099 584 297 25 20 chr15 67387083 67387279 -36107695 + MLT1D LTR MaLR 305 501 -4 5 1099 228 286 18 0 chr15 67387506 67387562 -36107412 + LTR78 LTR ERV1 309 365 -939 5 1099 201 345 85 24 chr15 67387564 67387775 -36107199 - L2c LINE L2 -248 3139 2916 5 1099 466 308 62 46 chr15 67388365 67388624 -36106350 + MLT1C LTR MaLR 69 331 -136 5 1099 610 161 17 11 chr15 67388627 67388803 -36106171 + GA-rich Low_complexity Low_complexity 2 178 0 5 1099 252 0 0 0 chr15 67388803 67388831 -36106143 + (TAGA)n Simple_repeat Simple_repeat 1 28 0 5 1099 240 35 0 0 chr15 67389102 67389131 -36105843 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1099 260 236 176 22 chr15 67389289 67389380 -36105594 + MER5A DNA MER1_type 82 186 -3 5 1099 189 404 82 0 chr15 67390992 67391138 -36103836 + MIRb SINE MIR 40 197 -71 5 1099 226 247 89 40 chr15 67391500 67391601 -36103373 - LTR9 LTR ERV1 -380 232 127 5 1099 300 338 15 0 chr15 67391721 67391841 -36103133 + MIRm SINE MIR 27 150 -118 5 1099 412 314 0 18 chr15 67391870 67392065 -36102909 + L1MB3 LINE L1 5851 6036 -132 5 1099 7056 92 8 9 chr15 67392064 67393056 -36101918 + L1_Mus4 LINE L1 5643 6633 -3 5 1099 229 200 0 0 chr15 67393069 67393119 -36101855 + L1MB3 LINE L1 6045 6094 -77 5 1099 615 27 0 0 chr15 67393262 67393335 -36101639 + (TC)n Simple_repeat Simple_repeat 2 74 0 5 1099 299 264 31 8 chr15 67393426 67393556 -36101418 - L1M3 LINE L1 -360 5823 5691 5 1099 306 87 0 0 chr15 67395219 67395265 -36099709 + (CAT)n Simple_repeat Simple_repeat 2 47 0 5 1099 645 234 0 8 chr15 67395304 67395433 -36099541 + B3 SINE B2 85 212 -4 5 1099 22 0 0 0 chr15 67395963 67395985 -36098989 + AT_rich Low_complexity Low_complexity 1 22 0 5 1099 212 365 104 55 chr15 67396376 67396596 -36098378 + L2b LINE L2 3116 3346 -29 5 1099 1978 205 25 23 chr15 67396772 67397211 -36097763 - BGLII_B LTR ERVK -1 440 1 5 1099 449 121 12 0 chr15 67397408 67397491 -36097483 + (CA)n Simple_repeat Simple_repeat 2 85 0 5 1099 680 110 1 3 chr15 67398114 67398224 -36096750 - L1_Mm LINE L1 -929 4954 4826 5 1099 3661 21 7 0 chr15 67398220 67398652 -36096322 + L1Md_T LINE L1 5152 5586 -297 5 1099 8355 35 1 0 chr15 67398652 67399647 -36095327 + L1Md_T LINE L1 5587 6582 0 5 1099 2109 62 4 0 chr15 67399650 67399925 -36095049 - L1_Mm LINE L1 -1007 4876 4601 5 1099 1885 45 0 0 chr15 67399922 67400144 -36094830 + L1Md_F2 LINE L1 5365 5586 -297 5 1099 7825 60 0 4 chr15 67400144 67401131 -36093843 + L1Md_F2 LINE L1 5587 6569 -13 5 1099 303 318 46 9 chr15 67401355 67401463 -36093511 - MIRb SINE MIR -64 204 93 5 1099 1019 262 52 24 chr15 67401867 67402156 -36092818 - Lx8 LINE L1 -87 7386 7090 5 1099 432 97 0 0 chr15 67402582 67402644 -36092330 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 1099 339 0 59 0 chr15 67404151 67404202 -36090772 + (TTTTTG)n Simple_repeat Simple_repeat 2 55 0 5 1099 30 0 0 0 chr15 67405343 67405373 -36089601 + AT_rich Low_complexity Low_complexity 1 30 0 5 1099 333 0 0 0 chr15 67405833 67405870 -36089104 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1099 694 232 113 5 chr15 67406000 67406195 -36088779 - B3 SINE B2 0 216 1 5 1099 1217 196 130 8 chr15 67406362 67406624 -36088350 + Lx4A LINE L1 6760 7053 -5 5 1099 225 0 0 0 chr15 67406625 67406650 -36088324 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 5 1099 530 317 130 14 chr15 67407280 67407488 -36087486 + B4A SINE B4 2 233 -59 5 1099 25 0 0 0 chr15 67407625 67407650 -36087324 + AT_rich Low_complexity Low_complexity 1 25 0 5 1099 199 204 23 0 chr15 67407991 67408035 -36086939 + L2a LINE L2 3377 3421 -5 5 1099 310 370 7 15 chr15 67408281 67408418 -36086556 - MER5A DNA MER1_type -6 183 48 5 1099 1078 302 70 34 chr15 67408514 67408983 -36085991 - Lx7 LINE L1 -416 7280 6795 5 1099 1194 249 93 120 chr15 67408981 67409317 -36085657 - Lx7 LINE L1 -1113 6583 6259 5 1099 4129 71 2 13 chr15 67409317 67409870 -36085104 - L1_Mus1 LINE L1 0 6567 6021 5 1099 1194 249 93 120 chr15 67409870 67410007 -36084967 - Lx7 LINE L1 -1438 6258 6123 5 1099 327 354 35 9 chr15 67410343 67410587 -36084387 + L1MEg1 LINE L1 5 119 -6116 5 1099 715 169 27 40 chr15 67410695 67410843 -36084131 - B1_Mur3 SINE Alu -1 148 3 5 1099 513 274 0 70 chr15 67410937 67411094 -36083880 + B3A SINE B2 1 146 -52 5 1099 24 0 0 0 chr15 67411129 67411153 -36083821 + AT_rich Low_complexity Low_complexity 1 24 0 5 1099 369 273 36 57 chr15 67411321 67411461 -36083513 - L1MA4A LINE L1 -377 5926 5790 5 1099 3067 232 53 18 chr15 67411445 67412124 -36082850 + Lx6 LINE L1 6758 7460 0 5 1099 1361 298 92 77 chr15 67412127 67413604 -36081370 - Lx7 LINE L1 -117 5763 4204 5 1099 969 101 65 0 chr15 67413604 67413742 -36081232 - B1_Mus2 SINE Alu 0 147 1 5 1099 1361 294 79 79 chr15 67413742 67414071 -36080903 - Lx7 LINE L1 -1914 4229 3914 5 1099 896 306 58 26 chr15 67414069 67414861 -36080113 + L1M2 LINE L1 2161 2977 -3166 5 1099 6472 214 68 27 chr15 67414916 67417215 -36077759 + L1_Mur3 LINE L1 546 2928 -2952 5 1099 2763 79 19 3 chr15 67417217 67417596 -36077378 - MTB LTR MaLR -15 385 1 5 1099 1298 279 49 3 chr15 67417683 67418010 -36076964 - Lx6 LINE L1 -136 7324 6983 5 1099 2095 206 51 14 chr15 67418014 67418525 -36076449 + L1_Mur3 LINE L1 3627 4156 -1724 5 1099 411 133 26 13 chr15 67418526 67418602 -36076372 + L1_Mur3 LINE L1 4353 4429 -1451 5 1099 391 316 45 105 chr15 67418674 67418960 -36076014 + Lx8 LINE L1 7128 7396 -77 5 1099 2107 184 54 3 chr15 67419050 67419436 -36075538 + MTC LTR MaLR 14 419 -2 6 1099 787 170 88 0 chr15 67419438 67419585 -36075389 + MTC-int LTR MaLR 1 160 -1098 6 1099 5995 1 0 1 chr15 67419588 67420253 -36074721 - L1_Mm LINE L1 -831 5052 4388 6 1099 2521 11 0 0 chr15 67420253 67420538 -36074436 + L1Md_A LINE L1 6298 6582 0 6 1099 1432 225 129 47 chr15 67420566 67421009 -36073965 + MTC-int LTR MaLR 145 623 -635 6 1099 25 0 0 0 chr15 67421021 67421046 -36073928 + AT_rich Low_complexity Low_complexity 1 25 0 6 1099 634 329 133 32 chr15 67421089 67421893 -36073081 + L1M5 LINE L1 4890 5786 -387 6 1099 513 0 0 0 chr15 67422005 67422062 -36072912 + (TA)n Simple_repeat Simple_repeat 2 58 0 6 1099 749 281 16 10 chr15 67422063 67422257 -36072717 - RMER30 DNA MER1_type -1 201 7 6 1099 22 70 0 0 chr15 67422438 67422481 -36072493 + AT_rich Low_complexity Low_complexity 1 43 0 6 1099 234 128 0 0 chr15 67422922 67422961 -36072013 + (TGG)n Simple_repeat Simple_repeat 1 39 0 6 1099 787 241 13 48 chr15 67424452 67424679 -36070295 + MLT2C2 LTR ERVL 9 227 -237 6 1099 244 204 0 0 chr15 67424735 67424784 -36070190 + Lx7 LINE L1 7627 7675 -21 6 1099 843 127 7 21 chr15 67426995 67427140 -36067834 - URR1B DNA MER1_type 0 225 83 6 1099 302 200 18 0 chr15 67427137 67427192 -36067782 + MLT1A1 LTR MaLR 94 149 -259 6 1099 476 267 45 74 chr15 67427204 67427406 -36067568 + B3A SINE B2 2 197 -1 6 1099 1495 48 0 21 chr15 67427552 67427744 -36067230 - B2_Mm2 SINE B2 -4 191 4 6 1099 238 333 10 0 chr15 67427773 67427875 -36067099 + L1M3 LINE L1 5141 5243 -897 6 1099 1436 141 55 48 chr15 67427909 67428199 -36066775 - Lx2 LINE L1 -6 6991 6700 6 1099 347 348 101 14 chr15 67428820 67429027 -36065947 + RMER15 LTR ERVL 337 561 -14 6 1099 215 255 0 18 chr15 67429043 67429099 -36065875 + GA-rich Low_complexity Low_complexity 4 58 0 6 1099 1443 268 29 65 chr15 67429242 67429753 -36065221 + Lx9 LINE L1 6978 7470 -174 6 1099 584 102 10 0 chr15 67429760 67429858 -36065116 + (TG)n Simple_repeat Simple_repeat 2 100 0 6 1099 270 261 80 0 chr15 67429866 67429954 -36065020 + Lx9 LINE L1 7535 7629 -15 6 1099 3106 64 2 5 chr15 67431288 67431697 -36063277 + L1Md_F2 LINE L1 6174 6581 -1 6 1099 568 87 29 9 chr15 67431695 67431800 -36063174 + L1Md_F2 LINE L1 6471 6577 -5 6 1099 244 309 0 0 chr15 67432095 67432150 -36062824 + RMER1B Other Other 36 90 -976 6 1099 1127 269 58 16 chr15 67432153 67432594 -36062380 + RMER1B Other Other 65 848 -494 6 1099 2961 286 151 10 chr15 67432620 67433675 -36061299 + RMER1A Other Other 1 1009 -21 6 1099 204 125 0 0 chr15 67433709 67433741 -36061233 + (CAG)n Simple_repeat Simple_repeat 1 32 0 6 1099 350 345 138 4 chr15 67434169 67434445 -36060529 + BLACKJACK DNA AcHobo 895 1207 -1737 6 1099 312 283 92 25 chr15 67434704 67434900 -36060074 + BLACKJACK DNA AcHobo 1331 1539 -1405 6 1099 1886 277 49 36 chr15 67434932 67435547 -36059427 + Lx8 LINE L1 6846 7468 -5 6 1099 822 298 169 20 chr15 67435658 67436203 -36058771 + BLACKJACK DNA AcHobo 1739 2364 -580 6 1099 446 310 83 29 chr15 67436366 67436642 -36058332 + B4A SINE B4 1 291 -1 6 1099 236 214 0 18 chr15 67436662 67436719 -36058255 + (CATA)n Simple_repeat Simple_repeat 4 59 0 6 1099 2879 225 133 4 chr15 67436756 67437580 -36057394 + Lx9 LINE L1 6714 7643 -1 6 1099 789 287 118 57 chr15 67437712 67438204 -36056770 + Lx9 LINE L1 6995 7516 -128 6 1099 260 271 105 0 chr15 67438225 67438358 -36056616 + Lx9 LINE L1 7478 7624 -20 6 1099 422 114 0 14 chr15 67438575 67438646 -36056328 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 1099 679 312 90 55 chr15 67438717 67439063 -36055911 + ORR1E LTR MaLR 2 359 0 6 1099 201 254 0 17 chr15 67439087 67439147 -36055827 + (CAAGA)n Simple_repeat Simple_repeat 3 61 0 6 1099 588 65 0 0 chr15 67439149 67439226 -36055748 + (CATAA)n Simple_repeat Simple_repeat 1 77 0 6 1099 7453 179 16 6 chr15 67439672 67441075 -36053899 + L1_Mm LINE L1 4465 5881 -2 6 1099 846 30 0 0 chr15 67441182 67441283 -36053691 + (TC)n Simple_repeat Simple_repeat 2 102 0 6 1099 198 0 0 0 chr15 67441283 67441304 -36053670 + (TA)n Simple_repeat Simple_repeat 1 22 0 6 1099 225 0 0 0 chr15 67441304 67441328 -36053646 + (GA)n Simple_repeat Simple_repeat 2 26 0 6 1099 450 0 0 0 chr15 67441602 67441652 -36053322 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1099 376 326 111 0 chr15 67441883 67442027 -36052947 - HAL1-3A_ME LINE L1 -415 2443 2284 6 1099 306 0 0 0 chr15 67442027 67442061 -36052913 + (TTTC)n Simple_repeat Simple_repeat 1 34 0 6 1099 397 334 78 86 chr15 67442163 67442713 -36052261 + L1MC5 LINE L1 7029 7574 -387 6 1099 345 188 0 0 chr15 67443162 67443247 -36051727 + GA-rich Low_complexity Low_complexity 3 87 0 6 1099 191 255 176 0 chr15 67443392 67443443 -36051531 - MIRc SINE MIR -89 179 120 6 1099 320 125 28 0 chr15 67444069 67444141 -36050833 + (CAGA)n Simple_repeat Simple_repeat 1 74 0 6 1099 260 211 39 13 chr15 67444143 67444220 -36050754 + (CAGAGA)n Simple_repeat Simple_repeat 1 79 0 6 1099 206 246 56 42 chr15 67444279 67444351 -36050623 - MIR SINE MIR -72 136 64 6 1099 2970 91 0 0 chr15 67444517 67444922 -36050052 - L1_Mus4 LINE L1 -6 6630 6226 6 1099 258 277 73 32 chr15 67445026 67445149 -36049825 + L1MCa LINE L1 57 184 -6324 6 1099 2569 118 67 7 chr15 67445193 67445610 -36049364 + Lx3C LINE L1 6533 6974 -2 6 1099 1288 255 137 35 chr15 67445729 67446232 -36048742 + L1MC1 LINE L1 5184 5749 -584 6 1099 1690 96 0 4 chr15 67446232 67446484 -36048490 + L1_Mus4 LINE L1 6380 6630 -6 6 1099 1288 271 122 42 chr15 67446484 67446749 -36048225 + L1MC1 LINE L1 5750 6011 -322 6 1099 662 254 203 41 chr15 67446758 67447049 -36047925 + L1MCa LINE L1 399 736 -5772 6 1099 237 204 152 90 chr15 67447259 67447404 -36047570 - MIRb SINE MIR -1 261 108 6 1099 190 305 68 0 chr15 67447551 67447610 -36047364 - L2c LINE L2 -235 3152 3090 6 1099 1445 252 135 11 chr15 67447935 67448465 -36046509 + RMER20B LTR ERVK 10 605 -22 6 1099 1742 303 88 0 chr15 67449072 67449616 -36045358 + Tigger7 DNA MER2_type 23 614 -1877 6 1099 258 352 0 0 chr15 67449610 67449681 -36045293 + Tigger7 DNA MER2_type 2411 2481 -10 6 1099 961 253 39 67 chr15 67449919 67450330 -36044644 + RLTR11A2 LTR ERVK 1 414 -27 6 1099 3199 43 10 0 chr15 67451673 67452065 -36042909 - MTA_Mm LTR MaLR 0 396 1 6 1099 223 341 64 36 chr15 67452898 67453038 -36041936 - MIRc SINE MIR -61 207 64 6 1099 2023 160 39 34 chr15 67453361 67453743 -36041231 - ORR1C2 LTR MaLR 0 384 1 6 1099 392 225 45 150 chr15 67453743 67454030 -36040944 + Lx9 LINE L1 7388 7644 0 6 1099 998 52 96 0 chr15 67454122 67454257 -36040717 + B1_Mus1 SINE Alu 1 148 0 6 1099 198 0 0 0 chr15 67454257 67454279 -36040695 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1099 250 241 0 126 chr15 67454485 67454580 -36040394 - MIRc SINE MIR -86 182 100 6 1099 301 280 76 48 chr15 67455520 67455625 -36039349 - MER77 LTR ERVL -269 338 231 6 1099 339 262 38 0 chr15 67455546 67455626 -36039348 - MER21B LTR ERV1 -554 309 227 6 1099 366 42 0 0 chr15 67456005 67456053 -36038921 + (TTG)n Simple_repeat Simple_repeat 2 49 0 6 1099 992 92 41 21 chr15 67456053 67456190 -36038784 - B1_Mus1 SINE Alu -5 143 1 6 1099 235 217 0 0 chr15 67457156 67457202 -36037772 - L1M4 LINE L1 -497 5677 5632 6 1099 7096 157 41 15 chr15 67458230 67460317 -36034657 - Lx3C LINE L1 -2 6974 4841 6 1099 314 224 25 73 chr15 67460788 67460898 -36034076 + B1_Mur1 SINE Alu 2 147 -2 6 1099 228 258 0 16 chr15 67461520 67461583 -36033391 + GA-rich Low_complexity Low_complexity 4 65 0 6 1099 239 380 14 42 chr15 67462851 67462994 -36031980 - LTR33A_ LTR ERVL -352 179 41 6 1099 207 0 0 0 chr15 67463241 67463264 -36031710 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6 1099 21 57 0 0 chr15 67463264 67463299 -36031675 + AT_rich Low_complexity Low_complexity 1 35 0 6 1099 3373 106 49 2 chr15 67463299 67463808 -36031166 - L1_Mus3 LINE L1 -1 6637 6105 6 1099 4096 70 0 0 chr15 67463808 67464424 -36030550 + L1_Mus3 LINE L1 5490 6105 -461 6 1099 232 82 82 0 chr15 67464678 67464739 -36030235 + (TA)n Simple_repeat Simple_repeat 1 66 0 6 1099 1202 41 7 0 chr15 67467329 67467475 -36027499 - B1_Mm SINE Alu 0 147 1 6 1099 728 324 69 47 chr15 67467806 67468123 -36026851 - MLT1F LTR MaLR -144 404 81 6 1099 22 0 0 0 chr15 67469607 67469629 -36025345 + AT_rich Low_complexity Low_complexity 1 22 0 6 1099 1689 224 69 8 chr15 67470116 67470441 -36024533 + MTD LTR MaLR 4 351 -68 6 1099 252 0 0 0 chr15 67470441 67470469 -36024505 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 6 1099 1689 224 69 8 chr15 67470469 67470535 -36024439 + MTD LTR MaLR 352 418 -1 6 1099 443 333 66 24 chr15 67470939 67471151 -36023823 - RMER15 LTR ERVL -19 556 336 6 1099 576 0 0 0 chr15 67471499 67471563 -36023411 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 6 1099 581 281 39 15 chr15 67473074 67473280 -36021694 + ID_B1 SINE B4 1 211 -13 6 1099 726 0 10 21 chr15 67473819 67473915 -36021059 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 6 1099 465 19 0 0 chr15 67474526 67474580 -36020394 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 1099 24 32 0 0 chr15 67474749 67474780 -36020194 + AT_rich Low_complexity Low_complexity 1 31 0 6 1099 5605 160 68 30 chr15 67474880 67475925 -36019049 - Lx4B LINE L1 0 7058 5974 6 1099 404 148 24 36 chr15 67475915 67475999 -36018975 - L1_Mm LINE L1 -414 5469 5387 6 1099 32023 26 0 0 chr15 67476156 67480774 -36014200 - L1Md_T LINE L1 0 6582 2024 6 1099 198 0 0 0 chr15 67481461 67481483 -36013491 + (TG)n Simple_repeat Simple_repeat 2 23 0 6 1099 543 309 82 6 chr15 67481629 67481811 -36013163 - ORR1E-int LTR MaLR -640 730 535 6 1099 1255 214 135 40 chr15 67481884 67482254 -36012720 - ORR1E-int LTR MaLR -965 405 1 6 1099 727 324 52 20 chr15 67482256 67482600 -36012374 - ORR1E LTR MaLR 0 359 5 6 1099 237 269 138 11 chr15 67482661 67482755 -36012219 - MIRb SINE MIR -161 107 2 6 1099 1250 170 14 14 chr15 67482763 67482984 -36011990 + URR1B DNA MER1_type 5 225 0 6 1099 317 277 49 104 chr15 67484535 67484766 -36010208 - MLT1E3 LTR MaLR -8 645 421 6 1099 211 277 10 19 chr15 67485173 67485276 -36009698 + T-rich Low_complexity Low_complexity 2 103 0 6 1099 25 0 0 0 chr15 67486117 67486142 -36008832 + AT_rich Low_complexity Low_complexity 1 25 0 6 1099 33 25 0 0 chr15 67486571 67486611 -36008363 + AT_rich Low_complexity Low_complexity 1 40 0 7 1099 1216 117 17 0 chr15 67486619 67486798 -36008176 + B2_Mm2 SINE B2 2 183 -12 7 1099 21 57 0 0 chr15 67486932 67486967 -36008007 + AT_rich Low_complexity Low_complexity 1 35 0 7 1099 2912 71 8 5 chr15 67487794 67488193 -36006781 + L1_Mus3 LINE L1 6237 6636 -2 7 1099 327 96 0 0 chr15 67488217 67488269 -36006705 + (A)n Simple_repeat Simple_repeat 1 52 0 7 1099 1323 305 113 16 chr15 67488271 67489721 -36005253 + L1M4c LINE L1 665 2367 -4735 7 1099 405 315 17 23 chr15 67490515 67490687 -36004287 + (CATA)n Simple_repeat Simple_repeat 2 172 0 7 1099 788 345 39 25 chr15 67490794 67491228 -36003746 - Lx8 LINE L1 -255 7218 6779 7 1099 305 324 40 61 chr15 67492595 67492743 -36002231 + L1M5 LINE L1 5433 5577 -547 7 1099 15697 83 27 89 chr15 67493030 67495362 -35999612 + L1_Mur1 LINE L1 2507 4674 -1212 7 1099 2665 112 5 2 chr15 67495362 67495763 -35999211 + L1_Mus3 LINE L1 6234 6635 -3 7 1099 15697 83 27 89 chr15 67495763 67496114 -35998860 + L1_Mur1 LINE L1 4675 5024 -862 7 1099 22539 79 1 4 chr15 67496119 67500000 -35994974 + L1Md_Gf LINE L1 337 4301 -1585 7 1099 9272 74 1 8 chr15 67500000 67501297 -35993677 + L1Md_F2 LINE L1 4299 5586 -297 1 137 7836 55 8 0 chr15 67501297 67502284 -35992690 + L1Md_F2 LINE L1 5587 6581 -1 1 1100 9502 85 14 9 chr15 67502284 67503168 -35991806 + Lx3_Mus LINE L1 5028 5905 -1104 2 1100 645 14 0 0 chr15 67503168 67503242 -35991732 + (GA)n Simple_repeat Simple_repeat 1 74 0 3 1100 681 47 0 0 chr15 67503244 67503329 -35991645 + (GAAAA)n Simple_repeat Simple_repeat 3 87 0 4 1100 9502 77 26 11 chr15 67503329 67504405 -35990569 + Lx3_Mus LINE L1 5906 7009 0 2 1100 2747 192 73 18 chr15 67504973 67505518 -35989456 + RMER15 LTR ERVL 1 575 0 5 1100 276 256 78 0 chr15 67505621 67505711 -35989263 - ERVL-B4-int LTR ERVL -36 5678 5582 6 1100 245 338 0 14 chr15 67505711 67505780 -35989194 - MTD-int LTR MaLR -120 1460 1393 7 1100 569 310 34 39 chr15 67505815 67506020 -35988954 + B4A SINE B4 4 207 -85 8 1100 365 62 24 48 chr15 67506020 67506104 -35988870 + (CAAAAA)n Simple_repeat Simple_repeat 2 83 0 9 1100 9396 175 64 11 chr15 67506198 67508722 -35986252 - Lx5 LINE L1 -565 6485 3816 1 1100 902 214 215 11 chr15 67508722 67508982 -35985992 + MTD LTR MaLR 107 419 0 1 1100 4323 84 7 2 chr15 67509595 67510180 -35984794 - L1_Mus4 LINE L1 -7 6629 6042 1 1100 369 356 34 14 chr15 67510471 67510619 -35984355 - MIRb SINE MIR -92 176 26 1 1100 2746 254 77 74 chr15 67511173 67512114 -35982860 - MTD-int LTR MaLR -11 1247 305 7 1100 501 97 0 0 chr15 67512121 67512193 -35982781 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 1100 472 339 67 28 chr15 67512194 67512373 -35982601 - B3 SINE B2 -30 186 1 1 1100 541 291 59 72 chr15 67512398 67512635 -35982339 - MTD-int LTR MaLR -1023 235 2 7 1100 1259 276 57 6 chr15 67512636 67512968 -35982006 - MTD LTR MaLR 0 419 71 7 1100 231 360 11 0 chr15 67513020 67513109 -35981865 + MLT1A1 LTR MaLR 3 92 -316 1 1100 596 355 51 72 chr15 67513919 67514587 -35980387 + L1MEb LINE L1 260 913 -5157 1 1100 749 182 6 63 chr15 67515070 67515228 -35979746 + B1_Mur3 SINE Alu 1 149 0 1 1100 609 90 0 0 chr15 67515317 67515406 -35979568 + (TCTA)n Simple_repeat Simple_repeat 3 91 0 1 1100 870 316 0 0 chr15 67515406 67515599 -35979375 - B3 SINE B2 -23 193 1 2 1100 678 149 133 3 chr15 67515934 67516067 -35978907 - ORR1D2 LTR MaLR -11 348 194 2 1100 192 250 0 0 chr15 67516103 67516183 -35978791 + (CA)n Simple_repeat Simple_repeat 1 80 0 2 1100 729 50 69 28 chr15 67516187 67516331 -35978643 + (GGGAGA)n Simple_repeat Simple_repeat 3 152 0 2 1100 829 231 103 24 chr15 67516434 67516647 -35978327 + MTEb LTR MaLR 1 230 -149 2 1100 707 274 32 58 chr15 67516643 67516833 -35978141 - ORR1D2 LTR MaLR -185 185 1 2 1100 325 342 8 8 chr15 67518614 67518735 -35976239 + MER5A1 DNA MER1_type 8 128 -38 2 1100 238 355 120 8 chr15 67518771 67518896 -35976078 + LTR33A_ LTR ERVL 68 206 -325 2 1100 2133 244 35 82 chr15 67519376 67520509 -35974465 + RMER1B Other Other 65 863 -479 2 1100 180 329 119 42 chr15 67520839 67520982 -35973992 - L2a LINE L2 0 3426 3273 2 1100 432 0 0 0 chr15 67521029 67521077 -35973897 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1100 431 248 120 7 chr15 67521910 67522060 -35972914 + MLT2C1 LTR ERVL 3 169 -228 3 1100 312 27 0 0 chr15 67522072 67522109 -35972865 + (TTA)n Simple_repeat Simple_repeat 3 39 0 3 1100 2042 84 0 14 chr15 67522109 67522400 -35972574 - L1Md_F2 LINE L1 -24 6558 6272 3 1100 241 275 196 11 chr15 67522400 67522492 -35972482 + MLT2C1 LTR ERVL 182 290 -174 3 1100 654 278 65 54 chr15 67523623 67523901 -35971073 + B4A SINE B4 2 282 -10 3 1100 21 0 0 0 chr15 67524171 67524192 -35970782 + AT_rich Low_complexity Low_complexity 1 21 0 3 1100 366 288 20 22 chr15 67524876 67525094 -35969880 - B4A SINE B4 -5 287 6 3 1100 27 81 0 0 chr15 67525280 67525342 -35969632 + AT_rich Low_complexity Low_complexity 1 62 0 3 1100 2206 66 24 0 chr15 67525342 67525630 -35969344 - L1_Mus1 LINE L1 0 6567 6273 3 1100 192 40 0 0 chr15 67525822 67525847 -35969127 + (CAGAGA)n Simple_repeat Simple_repeat 2 26 0 3 1100 615 280 97 10 chr15 67526161 67526356 -35968618 + B3A SINE B2 2 213 -3 3 1100 4541 6 0 0 chr15 67526564 67527062 -35967912 - L1Md_T LINE L1 0 6582 6085 4 1100 6725 15 0 0 chr15 67527062 67528076 -35966898 + L1Md_T LINE L1 5076 6089 -493 4 1100 661 211 188 54 chr15 67528095 67528335 -35966639 - RLTR10A LTR ERVK 0 411 140 4 1100 1793 169 15 24 chr15 67528376 67528754 -35966220 - RLTR45-int LTR ERVK -202 7042 6590 4 1100 31 0 0 0 chr15 67529151 67529182 -35965792 + AT_rich Low_complexity Low_complexity 1 31 0 4 1100 446 273 328 25 chr15 67529314 67529674 -35965300 - Lx9 LINE L1 -182 7462 6997 4 1100 612 334 78 33 chr15 67529916 67530250 -35964724 - MLT1A LTR MaLR 0 374 26 4 1100 593 340 21 21 chr15 67530574 67530862 -35964112 + B4A SINE B4 5 292 0 4 1100 396 276 56 32 chr15 67530900 67531160 -35963814 + L1ME1 LINE L1 5668 5929 -250 4 1100 369 0 0 0 chr15 67531279 67531320 -35963654 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1100 563 333 27 121 chr15 67531320 67531386 -35963588 - B4A SINE B4 -23 269 207 4 1100 1166 57 0 0 chr15 67531386 67531527 -35963447 + B1_Mm SINE Alu 1 141 -6 5 1100 621 38 0 0 chr15 67531531 67531611 -35963363 + (GA)n Simple_repeat Simple_repeat 2 81 0 5 1100 563 333 27 121 chr15 67531611 67531836 -35963138 - B4A SINE B4 -86 206 1 4 1100 252 0 0 0 chr15 67532467 67532495 -35962479 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1100 478 278 168 75 chr15 67532917 67533185 -35961789 + MLT1A0 LTR MaLR 54 346 -19 5 1100 1909 151 39 127 chr15 67533812 67534244 -35960730 - ORR1B1 LTR MaLR 0 394 1 5 1100 382 296 135 50 chr15 67534531 67534812 -35960162 - ERVL-B4-int LTR ERVL -3536 2178 1874 5 1100 400 308 52 78 chr15 67535048 67535280 -35959694 + MER31B LTR ERV1 211 436 -30 5 1100 261 196 0 0 chr15 67536410 67536466 -35958508 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1100 293 327 58 46 chr15 67536862 67537035 -35957939 + L2 LINE L2 2838 3012 -407 5 1100 370 214 0 12 chr15 67537441 67537526 -35957448 - L1_Mur2 LINE L1 -6452 260 177 5 1100 203 294 14 14 chr15 67538084 67538153 -35956821 - MIRc SINE MIR -68 200 132 6 1100 480 315 0 0 chr15 67538937 67539048 -35955926 + MTEa LTR MaLR 18 128 -251 6 1100 2110 160 0 3 chr15 67539060 67539399 -35955575 + ORR1A1 LTR MaLR 1 338 -8 6 1100 629 298 44 56 chr15 67539399 67539648 -35955326 + MTEa LTR MaLR 132 377 -2 6 1100 16493 102 15 27 chr15 67539790 67540963 -35954011 - L1_Mus4 LINE L1 0 6636 5635 6 1100 591 15 0 0 chr15 67540963 67541031 -35953943 + (GA)n Simple_repeat Simple_repeat 2 69 0 6 1100 16493 157 23 58 chr15 67541031 67544168 -35950806 - L1_Mus4 LINE L1 -252 5634 2460 6 1100 263 264 148 19 chr15 67545447 67545609 -35949365 + Cheshire DNA MER1_type 79 261 -2159 6 1100 391 165 12 17 chr15 67545993 67546075 -35948899 - RMER13B LTR ERVK -879 79 1 6 1100 486 355 48 9 chr15 67546758 67546985 -35947989 - MIRb SINE MIR -8 260 25 6 1100 691 265 118 48 chr15 67548019 67548332 -35946642 + Lx8 LINE L1 7139 7473 0 6 1100 1625 38 5 0 chr15 67548403 67548615 -35946359 - L1Md_F3 LINE L1 -606 5978 5766 6 1100 2027 34 34 8 chr15 67548615 67548880 -35946094 + L1Md_F3 LINE L1 6298 6569 -15 7 1100 579 51 0 0 chr15 67548900 67548979 -35945995 + (TC)n Simple_repeat Simple_repeat 2 80 0 7 1100 285 29 0 0 chr15 67548979 67549012 -35945962 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1100 683 301 0 14 chr15 67549012 67549160 -35945814 - B3A SINE B2 -50 148 3 7 1100 708 12 0 0 chr15 67549714 67549795 -35945179 + (TC)n Simple_repeat Simple_repeat 2 82 0 7 1100 423 0 0 0 chr15 67549795 67549841 -35945133 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1100 243 295 110 50 chr15 67550362 67550462 -35944512 + MLT1H LTR MaLR 106 211 -338 7 1100 274 286 50 10 chr15 67552305 67552404 -35942570 + MIRb SINE MIR 43 145 -123 7 1100 186 326 0 0 chr15 67552746 67552792 -35942182 - MIRc SINE MIR -64 204 159 7 1100 23 0 0 0 chr15 67553030 67553053 -35941921 + AT_rich Low_complexity Low_complexity 1 23 0 7 1100 285 351 104 30 chr15 67553272 67553407 -35941567 + MLT1I LTR MaLR 72 216 -195 8 1100 288 0 0 0 chr15 67553424 67553456 -35941518 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 8 1100 218 380 25 0 chr15 67553488 67553567 -35941407 - PB1D10 SINE Alu -34 83 3 8 1100 312 278 0 103 chr15 67554278 67554435 -35940539 + MIRb SINE MIR 43 184 -84 8 1100 238 387 42 0 chr15 67556583 67556725 -35938249 + L2a LINE L2 3277 3424 -2 8 1100 319 89 0 35 chr15 67557182 67557240 -35937734 + (GGA)n Simple_repeat Simple_repeat 3 58 0 8 1100 281 307 12 47 chr15 67557294 67557359 -35937615 + polypurine Low_complexity Low_complexity 4 67 0 8 1100 495 0 0 0 chr15 67557359 67557414 -35937560 + (GGAA)n Simple_repeat Simple_repeat 2 56 0 8 1100 281 307 12 47 chr15 67557414 67557519 -35937455 + polypurine Low_complexity Low_complexity 68 168 0 8 1100 217 324 0 0 chr15 67557728 67557799 -35937175 + MIR SINE MIR 67 137 -125 8 1100 206 81 0 26 chr15 67557800 67557838 -35937136 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 9 1100 1137 89 0 0 chr15 67557838 67557984 -35936990 - B1_Mus2 SINE Alu 0 147 2 9 1100 293 212 174 17 chr15 67557991 67558106 -35936868 + MIR SINE MIR 130 262 0 9 1100 464 77 13 0 chr15 67559054 67559132 -35935842 + (TCTG)n Simple_repeat Simple_repeat 2 80 0 9 1100 396 0 0 0 chr15 67559134 67559178 -35935796 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 1100 189 356 136 48 chr15 67559793 67560191 -35934783 - L2 LINE L2 -580 2839 2407 9 1100 357 24 0 0 chr15 67560890 67560932 -35934042 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 1100 265 293 114 51 chr15 67561853 67562029 -35932945 - MLT1E2 LTR MaLR -293 334 148 9 1100 258 291 12 25 chr15 67563056 67563137 -35931837 + LTR16A1 LTR ERVL 370 449 -7 9 1100 341 263 13 0 chr15 67563346 67563422 -35931552 + ID4_ SINE ID 4 80 -3 9 1100 405 0 0 0 chr15 67563431 67563476 -35931498 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1100 285 29 0 0 chr15 67563476 67563509 -35931465 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 1100 753 214 190 25 chr15 67564580 67564901 -35930073 + ORR1D1 LTR MaLR 1 374 0 1 1100 189 289 196 0 chr15 67565046 67565143 -35929831 - MIRc SINE MIR -103 165 50 1 1100 2910 34 2 149 chr15 67565384 67565839 -35929135 + RLTR10 LTR ERVK 1 388 -2 1 1100 12181 29 7 40 chr15 67565851 67567936 -35927038 + RLTR10-int LTR ERVK 41 1984 -3 1 1100 3028 31 2 116 chr15 67567938 67568378 -35926596 + RLTR10 LTR ERVK 1 390 0 1 1100 220 270 17 35 chr15 67568865 67568980 -35925994 + (TCTCTG)n Simple_repeat Simple_repeat 2 114 0 1 1100 243 79 0 0 chr15 67568982 67569020 -35925954 + (TC)n Simple_repeat Simple_repeat 2 39 0 1 1100 196 286 31 16 chr15 67569481 67569545 -35925429 - L3b LINE CR1 -260 222 158 1 1100 298 343 14 21 chr15 67570812 67570955 -35924019 - MLT2F LTR ERVL -520 143 2 1 1100 1548 292 42 78 chr15 67572300 67572905 -35922069 + Lx8 LINE L1 6748 7339 -134 1 1100 303 28 0 0 chr15 67572905 67572941 -35922033 + (GAAA)n Simple_repeat Simple_repeat 3 38 0 1 1100 975 69 7 14 chr15 67572941 67573088 -35921886 + (GGAGA)n Simple_repeat Simple_repeat 2 147 0 1 1100 1548 292 42 78 chr15 67573088 67573234 -35921740 + Lx8 LINE L1 7340 7472 -1 1 1100 338 295 131 60 chr15 67573553 67573852 -35921122 - L1M5 LINE L1 -813 5333 5055 1 1100 748 58 0 0 chr15 67573852 67573955 -35921019 - L1_Mus2 LINE L1 0 6566 6464 1 1100 310 313 143 99 chr15 67573955 67574229 -35920745 - L1M5 LINE L1 -1092 5054 4735 1 1100 272 313 46 23 chr15 67574486 67574705 -35920269 - L1MD LINE L1 -2285 3861 3638 1 1100 347 267 148 55 chr15 67574765 67574947 -35920027 - L1M5 LINE L1 -2596 3550 3352 1 1100 575 306 121 46 chr15 67574947 67575228 -35919746 - RMER15 LTR ERVL -1 574 273 1 1100 338 291 80 62 chr15 67575527 67575703 -35919271 - L1M5 LINE L1 -2944 3202 3024 1 1100 306 260 69 50 chr15 67576112 67576213 -35918761 + MLT1A1 LTR MaLR 2 104 -304 1 1100 1364 243 110 6 chr15 67576469 67576833 -35918141 + MTD LTR MaLR 1 402 -17 1 1100 460 117 0 13 chr15 67577227 67577305 -35917669 - MT2C_Mm LTR ERVL 0 475 399 1 1100 317 106 404 38 chr15 67577289 67577393 -35917581 - B2_Mm2 SINE B2 -7 188 47 1 1100 1137 116 35 0 chr15 67577445 67577618 -35917356 - B2_Mm1t SINE B2 -14 179 1 1 1100 3034 49 29 15 chr15 67577619 67578031 -35916943 - MT2C_Mm LTR ERVL -57 418 1 1 1100 218 303 61 76 chr15 67578219 67578351 -35916623 - MIRb SINE MIR -137 131 2 1 1100 2688 89 0 18 chr15 67579029 67579419 -35915555 - L1_Mus4 LINE L1 -7 6629 6247 1 1100 21 57 0 0 chr15 67579448 67579483 -35915491 + AT_rich Low_complexity Low_complexity 1 35 0 1 1100 756 248 97 9 chr15 67579504 67579834 -35915140 - L1MA8 LINE L1 -38 6253 5895 1 1100 598 319 41 20 chr15 67580061 67580256 -35914718 - MER58A DNA MER1_type 0 224 26 1 1100 261 306 142 59 chr15 67581089 67581308 -35913666 - RMER15 LTR ERVL -2 573 337 1 1100 330 306 72 113 chr15 67581366 67581561 -35913413 - B3A SINE B2 -8 187 1 1 1100 361 235 147 29 chr15 67582705 67582841 -35912133 + Tigger15a DNA TcMar 293 444 -271 1 1100 1069 212 14 24 chr15 67583310 67583523 -35911451 - B3 SINE B2 -4 212 2 1 1100 1767 68 12 0 chr15 67584446 67584697 -35910277 - L1_Mm LINE L1 -3341 2542 2289 1 1100 1051 28 14 14 chr15 67584697 67584840 -35910134 + L1Md_F3 LINE L1 6442 6584 0 1 1100 24 32 0 0 chr15 67585331 67585362 -35909612 + AT_rich Low_complexity Low_complexity 1 31 0 1 1100 1424 269 46 63 chr15 67585373 67586198 -35908776 + L1_Rod LINE L1 3815 4625 -1222 1 1100 7087 88 18 8 chr15 67586296 67587960 -35907014 - L1VL2 LINE L1 -1586 2029 352 1 1100 364 109 0 45 chr15 67587962 67588029 -35906945 - L1VL2 LINE L1 -6087 248 185 1 1100 193 321 0 0 chr15 67588520 67588573 -35906401 + L2c LINE L2 3024 3076 -311 1 1100 3010 82 17 12 chr15 67588923 67589328 -35905646 - MTB_Mm LTR MaLR 0 407 1 1 1100 863 112 7 0 chr15 67589459 67589611 -35905363 + (TC)n Simple_repeat Simple_repeat 2 154 0 1 1100 306 50 0 0 chr15 67589612 67589652 -35905322 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1100 2594 227 51 18 chr15 67591189 67591852 -35903122 + Lx5 LINE L1 6316 7000 -50 1 1100 737 199 167 5 chr15 67591905 67592097 -35902877 - URR1B DNA MER1_type -1 224 2 1 1100 357 325 57 13 chr15 67592987 67593146 -35901828 - MLT1D LTR MaLR -80 425 260 1 1100 7306 98 5 2 chr15 67593544 67594732 -35900242 - L1_Mus4 LINE L1 -8 6628 5440 1 1100 3118 50 0 0 chr15 67595448 67595829 -35899145 + L1Md_F2 LINE L1 6191 6571 -11 1 1100 4605 42 0 12 chr15 67595870 67596442 -35898532 + L1Md_F2 LINE L1 6005 6569 -13 1 1100 708 45 0 0 chr15 67596529 67596617 -35898357 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 1 1100 284 261 81 0 chr15 67596899 67597010 -35897964 - L1MA6 LINE L1 -394 5906 5787 1 1100 270 302 0 8 chr15 67597007 67597124 -35897850 - L1M3 LINE L1 -905 5235 5120 1 1100 709 289 114 17 chr15 67597213 67597229 -35897745 - MER31A LTR ERV1 -56 429 415 1 1100 378 0 0 0 chr15 67597229 67597271 -35897703 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1100 709 289 114 17 chr15 67597271 67597543 -35897431 - MER31A LTR ERV1 -71 414 113 1 1100 972 91 8 0 chr15 67597552 67597684 -35897290 + B1_Mus2 SINE Alu 3 135 -12 1 1100 1017 79 0 0 chr15 67597684 67597824 -35897150 + (GAAA)n Simple_repeat Simple_repeat 3 142 0 1 1100 329 292 20 7 chr15 67598095 67598243 -35896731 + L1M2 LINE L1 5633 5782 -515 1 1100 225 0 0 0 chr15 67598612 67598637 -35896337 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 1 1100 1216 48 0 7 chr15 67598713 67598861 -35896113 + B1_Mus2 SINE Alu 1 147 0 1 1100 834 295 105 36 chr15 67599223 67599557 -35895417 - ORR1E LTR MaLR 0 359 3 1 1100 495 0 0 0 chr15 67600372 67600427 -35894547 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1100 378 0 0 0 chr15 67600434 67600476 -35894498 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 1 1100 814 233 24 63 chr15 67600497 67600613 -35894361 + RMER16 LTR ERVK 289 395 -138 1 1100 2916 34 25 0 chr15 67600613 67600968 -35894006 + L1Md_A LINE L1 6218 6581 -1 1 1100 814 233 24 63 chr15 67600968 67601103 -35893871 + RMER16 LTR ERVK 396 530 -3 1 1100 485 197 5 0 chr15 67601119 67601331 -35893643 + (TA)n Simple_repeat Simple_repeat 1 213 0 1 1100 32 0 0 0 chr15 67601337 67601369 -35893605 + AT_rich Low_complexity Low_complexity 1 32 0 1 1100 217 298 13 132 chr15 67602302 67602453 -35892521 - L2a LINE L2 -50 3376 3244 1 1100 1243 253 104 9 chr15 67604091 67604426 -35890548 + ORR1D2 LTR MaLR 1 367 -3 1 1100 25 0 0 0 chr15 67604894 67604919 -35890055 + AT_rich Low_complexity Low_complexity 1 25 0 1 1100 4972 73 18 6 chr15 67605308 67605970 -35889004 - L1Md_F2 LINE L1 -14 6568 5899 1 1100 3374 67 2 22 chr15 67605971 67606463 -35888511 + L1_Mm LINE L1 4875 5356 -527 1 1100 196 298 138 0 chr15 67606677 67606771 -35888203 + L4 LINE RTE 207 313 -1716 1 1100 1812 184 16 16 chr15 67607603 67607967 -35887007 - ORR1B2 LTR MaLR -1 366 3 1 1100 292 158 88 0 chr15 67607967 67608024 -35886950 - ORR1B2-int LTR MaLR 0 1370 1309 1 1100 721 144 0 53 chr15 67608010 67608142 -35886832 - ORR1B2 LTR MaLR -269 125 1 1 1100 1813 77 12 16 chr15 67609506 67609758 -35885216 + L1_Mus1 LINE L1 6317 6567 0 1 1100 327 297 46 12 chr15 67609827 67609956 -35885018 - MIR SINE MIR -51 217 73 1 1100 395 313 156 41 chr15 67610427 67610747 -35884227 - L1MEd LINE L1 -4869 1250 894 1 1100 21 82 0 0 chr15 67610803 67610852 -35884122 + AT_rich Low_complexity Low_complexity 1 49 0 1 1100 429 329 38 31 chr15 67612411 67612571 -35882403 - B4 SINE B4 -131 161 1 1 1100 517 295 0 35 chr15 67612872 67613016 -35881958 + B3A SINE B2 1 139 -59 1 1100 354 247 0 64 chr15 67613443 67613521 -35881453 + B4 SINE B4 195 267 -25 1 1100 375 23 0 0 chr15 67613525 67613569 -35881405 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1100 180 311 0 51 chr15 67613605 67613683 -35881291 - L3 LINE CR1 -2239 2250 2177 1 1100 207 225 59 118 chr15 67614176 67614312 -35880662 + L2c LINE L2 3256 3383 -4 1 1100 701 270 212 40 chr15 67614631 67615075 -35879899 + Lx8 LINE L1 6921 7440 -33 1 1100 483 316 51 39 chr15 67615132 67615366 -35879608 + Lx8 LINE L1 7136 7372 -101 1 1100 1911 191 36 25 chr15 67615393 67615786 -35879188 + MTB_Mm LTR MaLR 3 399 -8 1 1100 396 347 80 53 chr15 67615845 67616259 -35878715 - Tigger13a DNA MER2_type -54 717 293 1 1100 245 215 191 27 chr15 67617617 67617727 -35877247 + MLT1A LTR MaLR 4 131 -259 1 1100 316 324 120 21 chr15 67617887 67618029 -35876945 + HAL1-3A_ME LINE L1 2284 2439 -419 1 1100 385 373 6 17 chr15 67618083 67618263 -35876711 + MLT1A LTR MaLR 197 374 0 1 1100 329 311 43 39 chr15 67618960 67619167 -35875807 - L1MD2 LINE L1 -5 6354 6147 1 1100 198 0 0 0 chr15 67619432 67619454 -35875520 + (TTG)n Simple_repeat Simple_repeat 2 23 0 1 1100 493 337 72 53 chr15 67619577 67619824 -35875150 - Lx8 LINE L1 -181 7292 7039 1 1100 333 0 0 0 chr15 67619824 67619861 -35875113 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 1100 493 337 72 53 chr15 67619861 67619933 -35875041 - Lx8 LINE L1 -435 7038 6967 1 1100 306 339 43 16 chr15 67619978 67620181 -35874793 - L1MD2 LINE L1 -361 5881 5674 1 1100 261 0 0 0 chr15 67620181 67620210 -35874764 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1100 306 339 43 16 chr15 67620210 67620309 -35874665 - L1MD2 LINE L1 -569 5673 5572 1 1100 570 272 5 0 chr15 67620344 67620535 -35874439 - L1MD2 LINE L1 -860 5499 5308 1 1100 270 0 0 0 chr15 67620723 67620753 -35874221 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1100 342 67 0 0 chr15 67620879 67620924 -35874050 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1100 226 188 21 0 chr15 67620993 67621041 -35873933 + T-rich Low_complexity Low_complexity 5 53 0 1 1100 739 288 5 11 chr15 67621041 67621227 -35873747 - B4A SINE B4 -62 230 46 1 1100 878 167 0 13 chr15 67623000 67623152 -35871822 + B1_Mur4 SINE Alu 1 150 0 1 1100 1764 208 74 15 chr15 67623457 67623847 -35871127 + MTC LTR MaLR 1 413 -8 1 1100 341 339 189 32 chr15 67624000 67624628 -35870346 + L1MEd LINE L1 906 1631 -4594 1 1100 453 273 20 0 chr15 67625215 67625314 -35869660 + B3A SINE B2 4 104 -94 1 1100 246 246 87 0 chr15 67625772 67625841 -35869133 - L2a LINE L2 -67 3359 3285 1 1100 451 324 122 54 chr15 67626596 67626818 -35868156 - B4A SINE B4 -8 284 48 2 1100 186 43 0 0 chr15 67627753 67627776 -35867198 + (TGG)n Simple_repeat Simple_repeat 3 25 0 2 1100 243 146 0 0 chr15 67628175 67628216 -35866758 + (TGG)n Simple_repeat Simple_repeat 3 43 0 2 1100 329 319 27 14 chr15 67628222 67628368 -35866606 - HAL1-2a_MD LINE L1 -517 2507 2360 2 1100 7799 33 4 4 chr15 67628924 67629906 -35865068 - L1Md_F2 LINE L1 -1 6581 5600 2 1100 2849 61 0 0 chr15 67630735 67631081 -35863893 - ORR1A1 LTR MaLR 0 346 1 2 1100 811 202 85 0 chr15 67631171 67631356 -35863618 + L1_Mur2 LINE L1 4648 4887 -1259 2 1101 938 285 8 30 chr15 67633173 67633437 -35861537 - Lx6 LINE L1 -184 7276 7019 2 1101 365 383 0 8 chr15 67633518 67633639 -35861335 + RSINE1 SINE B4 3 122 -43 2 1101 647 273 121 11 chr15 67633884 67634058 -35860916 - B3 SINE B2 -23 193 1 2 1101 22 0 0 0 chr15 67635008 67635030 -35859944 + AT_rich Low_complexity Low_complexity 1 22 0 2 1101 622 243 8 19 chr15 67635277 67635423 -35859551 + B1F2 SINE Alu 5 147 -2 2 1101 274 289 101 29 chr15 67635553 67635692 -35859282 + B1F SINE Alu 1 149 0 2 1101 225 97 15 46 chr15 67635986 67636051 -35858923 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 2 1101 1176 55 7 0 chr15 67636051 67636196 -35858778 - B1_Mus2 SINE Alu 0 147 2 2 1101 193 318 0 0 chr15 67636446 67636509 -35858465 + L2c LINE L2 3268 3330 -57 2 1101 242 156 15 45 chr15 67636812 67636879 -35858095 + T-rich Low_complexity Low_complexity 4 68 0 2 1101 274 188 0 0 chr15 67636996 67637044 -35857930 - L1M5 LINE L1 -697 5747 5700 2 1101 2223 63 36 3 chr15 67637041 67637345 -35857629 - L1Md_F2 LINE L1 -48 6534 6221 2 1101 23 0 0 0 chr15 67637438 67637461 -35857513 + AT_rich Low_complexity Low_complexity 1 23 0 2 1101 21 36 0 0 chr15 67637499 67637527 -35857447 + AT_rich Low_complexity Low_complexity 1 28 0 2 1101 13042 147 48 13 chr15 67637527 67640064 -35854910 - L1_Mur2 LINE L1 -204 5673 3048 2 1101 304 157 0 0 chr15 67640105 67640156 -35854818 - L1_Mur2 LINE L1 -3071 2806 2756 2 1101 2436 168 301 13 chr15 67640158 67640396 -35854578 - L1_Mur2 LINE L1 -3583 2294 2055 2 1101 369 0 0 0 chr15 67640396 67640437 -35854537 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1101 2436 169 218 14 chr15 67640437 67641346 -35853628 - L1_Mur2 LINE L1 -3823 2054 889 2 1101 316 281 115 14 chr15 67642251 67642399 -35852575 - BLACKJACK DNA AcHobo -2747 197 35 2 1101 1022 291 31 25 chr15 67642738 67643081 -35851893 + MTD LTR MaLR 3 335 -44 2 1101 3082 180 71 16 chr15 67643773 67644382 -35850592 - RLTR26 LTR ERVK 0 642 1 2 1101 539 315 64 60 chr15 67645251 67645484 -35849490 + B4A SINE B4 1 234 -58 2 1101 239 300 115 30 chr15 67645881 67646046 -35848928 - L1ME2 LINE L1 -51 6113 5935 2 1101 330 26 0 0 chr15 67646234 67646273 -35848701 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1101 261 0 0 0 chr15 67646273 67646302 -35848672 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 2 1101 294 231 83 0 chr15 67646994 67647102 -35847872 - L1MA9 LINE L1 -123 6177 6061 2 1101 590 182 0 20 chr15 67647168 67647269 -35847705 - RMER20B LTR ERVK 0 627 529 2 1101 1538 164 73 16 chr15 67647261 67647604 -35847370 - RMER20B LTR ERVK -213 414 1 2 1101 359 130 25 49 chr15 67647646 67647727 -35847247 - Lx6 LINE L1 -4 7456 7378 2 1101 237 33 0 0 chr15 67647758 67647788 -35847186 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 1101 484 201 44 77 chr15 67647796 67647957 -35847017 - RMER17B LTR ERVK -396 510 326 2 1101 413 19 19 0 chr15 67647957 67648011 -35846963 + (TAA)n Simple_repeat Simple_repeat 3 57 0 2 1101 331 253 27 93 chr15 67648011 67648053 -35846921 - RMER17B LTR ERVK -527 379 340 2 1101 3759 224 68 26 chr15 67648053 67648460 -35846514 - Lx7 LINE L1 -222 7474 7026 2 1101 3084 51 17 32 chr15 67648460 67648867 -35846107 - L1_Mus2 LINE L1 0 6566 6166 2 1101 3759 224 68 26 chr15 67648867 67649416 -35845558 - Lx7 LINE L1 -671 7025 6478 2 1101 873 212 85 0 chr15 67649455 67649644 -35845330 + ORR1C1 LTR MaLR 167 371 -7 2 1101 15830 184 62 95 chr15 67649644 67651295 -35843679 - Lx7 LINE L1 -1734 5962 4181 2 1101 246 62 0 0 chr15 67651295 67651327 -35843647 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 1101 15830 201 60 84 chr15 67651327 67653593 -35841381 - Lx7 LINE L1 -1700 4180 1880 2 1101 913 246 46 49 chr15 67653593 67653939 -35841035 - RLTR15 LTR ERVK -14 345 1 2 1101 15830 201 60 84 chr15 67653939 67655510 -35839464 - Lx7 LINE L1 -1700 1879 283 2 1101 331 267 92 41 chr15 67655514 67655796 -35839178 - L1MA9 LINE L1 -366 5946 5648 2 1101 228 135 0 0 chr15 67655811 67655848 -35839126 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1101 819 305 9 48 chr15 67655859 67656196 -35838778 - Lx9 LINE L1 -264 7380 7057 2 1101 236 164 18 35 chr15 67656302 67656359 -35838615 - Lx9 LINE L1 -615 7029 6974 2 1101 244 238 82 41 chr15 67656385 67656556 -35838418 - L1MA9 LINE L1 -847 5296 5119 2 1101 356 0 23 0 chr15 67656641 67656685 -35838289 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1101 618 195 0 34 chr15 67657028 67657145 -35837829 - RMER20A LTR ERVK -393 123 11 2 1101 25 0 0 0 chr15 67659250 67659275 -35835699 + AT_rich Low_complexity Low_complexity 1 25 0 2 1101 12776 23 0 0 chr15 67659402 67661638 -35833336 - L1Md_A LINE L1 0 6582 4347 2 1101 36003 27 2 7 chr15 67661627 67667004 -35827970 - L1Md_A LINE L1 -275 5608 266 2 1101 217 241 0 0 chr15 67667111 67667165 -35827809 + (CAT)n Simple_repeat Simple_repeat 2 55 0 2 1101 271 316 53 71 chr15 67668358 67668528 -35826446 + MIR SINE MIR 96 262 0 2 1101 283 322 35 0 chr15 67669051 67669166 -35825808 - MER53 DNA hAT -74 119 1 2 1101 217 240 20 0 chr15 67669711 67669761 -35825213 + GA-rich Low_complexity Low_complexity 6 56 0 2 1101 331 330 71 103 chr15 67669971 67670370 -35824604 + L1MDa LINE L1 414 884 -5749 2 1101 533 272 39 45 chr15 67670379 67670533 -35824441 + RSINE1 SINE B4 1 153 -12 2 1101 629 340 86 43 chr15 67670575 67671017 -35823957 + L1MDa LINE L1 879 1339 -5294 2 1101 330 275 191 43 chr15 67671020 67671324 -35823650 + L1MDa LINE L1 1997 2345 -4288 2 1101 783 214 134 14 chr15 67671383 67671606 -35823368 + Lx8 LINE L1 6608 6857 -616 2 1101 259 289 198 19 chr15 67672584 67672746 -35822228 + MIRb SINE MIR 64 254 -14 2 1101 270 375 73 62 chr15 67672782 67672961 -35822013 - MLT1H1 LTR MaLR -23 572 392 2 1101 312 363 51 56 chr15 67673038 67673254 -35821720 - MLT1H1 LTR MaLR -207 348 134 2 1101 528 252 46 0 chr15 67673575 67673706 -35821268 - B1F SINE Alu -10 139 3 2 1101 686 275 46 70 chr15 67673762 67674090 -35820884 + RLTR15 LTR ERVK 1 320 -39 2 1101 425 281 97 128 chr15 67674710 67675008 -35819966 + B4A SINE B4 2 290 -2 2 1101 284 297 10 19 chr15 67675132 67675235 -35819739 + GA-rich Low_complexity Low_complexity 3 104 0 2 1101 313 288 43 43 chr15 67675471 67675587 -35819387 - L2a LINE L2 -4 3422 3307 2 1101 703 135 8 8 chr15 67675995 67676129 -35818845 + GA-rich Low_complexity Low_complexity 1 134 0 2 1101 529 383 21 4 chr15 67677384 67677620 -35817354 + B4A SINE B4 44 283 -9 2 1101 1184 320 64 78 chr15 67678235 67678764 -35816210 + RMER15 LTR ERVL 1 522 -53 2 1101 393 319 135 91 chr15 67678832 67679190 -35815784 + MLT1A1 LTR MaLR 25 374 0 2 1101 207 365 68 39 chr15 67679285 67679490 -35815484 - MIRb SINE MIR -6 262 52 2 1101 309 346 5 84 chr15 67680246 67680461 -35814513 + MLT1J2 LTR MaLR 109 310 -134 2 1101 22 35 0 0 chr15 67681131 67681160 -35813814 + AT_rich Low_complexity Low_complexity 1 29 0 2 1101 303 93 0 0 chr15 67681675 67681718 -35813256 + (A)n Simple_repeat Simple_repeat 1 43 0 2 1101 216 0 0 0 chr15 67682242 67682266 -35812708 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1101 3044 138 39 8 chr15 67682298 67682810 -35812164 + Lx2B LINE L1 6473 7000 0 2 1101 549 287 83 12 chr15 67683184 67683353 -35811621 + MLT1F LTR MaLR 1 181 -367 2 1101 660 355 53 17 chr15 67683368 67683669 -35811305 + MLT1F LTR MaLR 237 548 0 2 1101 1548 204 16 3 chr15 67683950 67684255 -35810719 + Lx5 LINE L1 6723 7031 -19 2 1101 390 42 0 0 chr15 67684255 67684303 -35810671 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 2 1101 1752 199 20 70 chr15 67684970 67685429 -35809545 - RMER10A LTR ERVL -3 439 4 2 1101 267 202 0 33 chr15 67686060 67686152 -35808822 + GA-rich Low_complexity Low_complexity 2 90 0 2 1101 337 316 82 69 chr15 67686196 67686441 -35808533 + L1M5 LINE L1 5264 5511 -653 2 1101 456 67 0 0 chr15 67687321 67687381 -35807593 + (TTTC)n Simple_repeat Simple_repeat 2 61 0 2 1101 982 229 54 0 chr15 67687383 67687588 -35807386 - B3 SINE B2 0 216 1 2 1101 515 292 28 0 chr15 67687591 67687735 -35807239 - B1F SINE Alu -1 148 1 2 1101 180 0 0 0 chr15 67687749 67687769 -35807205 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1101 302 299 17 57 chr15 67687776 67687917 -35807057 - B1_Mur1 SINE Alu 0 149 13 2 1101 2729 72 0 0 chr15 67688252 67688611 -35806363 + L1_Mus1 LINE L1 6186 6544 -23 2 1101 486 91 26 0 chr15 67688637 67688714 -35806260 - L1_Mm LINE L1 -848 5035 4957 2 1101 1635 48 0 14 chr15 67688714 67688924 -35806050 + L1_Mus1 LINE L1 6361 6567 0 2 1101 2182 73 0 20 chr15 67689545 67689860 -35805114 + L1Md_F2 LINE L1 6275 6582 0 2 1101 250 404 119 0 chr15 67690778 67691013 -35803961 + MIRb SINE MIR 3 265 -3 2 1101 6283 97 3 1 chr15 67691321 67691599 -35803375 - L1_Mm LINE L1 -871 5012 4736 2 1101 210 37 0 0 chr15 67691599 67691626 -35803348 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1101 6283 97 3 1 chr15 67691626 67692283 -35802691 - L1_Mm LINE L1 -1148 4735 4076 2 1101 7195 72 51 0 chr15 67692281 67693638 -35801336 + L1_Mus1 LINE L1 5132 6566 -1 2 1101 718 137 107 0 chr15 67694743 67694874 -35800100 + Lx4B LINE L1 6444 6588 -470 2 1101 228 303 87 92 chr15 67694874 67695070 -35799904 + MLT1H-int LTR MaLR 871 1065 -344 2 1101 1174 171 39 4 chr15 67695070 67695299 -35799675 + Lx4B LINE L1 6785 7021 -37 2 1101 1197 41 0 0 chr15 67695311 67695458 -35799516 + (TAGA)n Simple_repeat Simple_repeat 2 148 0 2 1101 584 309 41 86 chr15 67696695 67696912 -35798062 + B4A SINE B4 36 259 -33 2 1101 288 0 0 0 chr15 67696912 67696944 -35798030 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1101 279 0 0 0 chr15 67696944 67696974 -35798000 + (GA)n Simple_repeat Simple_repeat 1 31 0 2 1101 426 85 0 0 chr15 67696984 67697043 -35797931 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 1101 584 309 41 86 chr15 67697043 67697082 -35797892 + B4A SINE B4 265 290 -2 2 1101 768 176 220 6 chr15 67697133 67697310 -35797664 + B3 SINE B2 1 215 -1 2 1101 2592 188 0 41 chr15 67697485 67698019 -35796955 + Lx LINE L1 6143 6654 0 3 1101 1350 262 28 18 chr15 67698056 67698448 -35796526 + Lx7 LINE L1 6934 7329 -367 3 1101 231 269 0 0 chr15 67698465 67698517 -35796457 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1101 306 0 0 0 chr15 67698577 67698611 -35796363 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1101 21765 96 27 3 chr15 67698628 67700905 -35794069 + L1Md_F LINE L1 331 2665 -3218 3 1101 2371 98 109 3 chr15 67700905 67701253 -35793721 + IAPEY_LTR LTR ERVK 1 385 0 3 1101 21765 70 2 5 chr15 67701253 67702904 -35792070 + L1Md_F LINE L1 2666 4312 -1571 3 1101 1964 28 28 4 chr15 67702904 67703157 -35791817 + L1Md_F3 LINE L1 6326 6584 0 3 1101 274 252 39 10 chr15 67703242 67703346 -35791628 + Lx7 LINE L1 7585 7691 -5 3 1101 7108 71 15 0 chr15 67703481 67704534 -35790440 - L1_Mus1 LINE L1 0 6567 5499 3 1101 612 231 56 46 chr15 67705130 67705325 -35789649 + B3A SINE B2 1 197 -1 3 1101 537 139 0 0 chr15 67705788 67705896 -35789078 + (TGG)n Simple_repeat Simple_repeat 2 109 0 3 1101 256 139 23 0 chr15 67705933 67705976 -35788998 - ORR1D1 LTR MaLR 0 374 331 3 1101 1093 301 14 20 chr15 67706276 67706610 -35788364 + ORR1E LTR MaLR 10 367 -12 3 1101 198 0 0 0 chr15 67706772 67706794 -35788180 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 1101 975 89 7 43 chr15 67706795 67706935 -35788039 - B1_Mm SINE Alu -12 135 1 3 1101 239 0 32 0 chr15 67706937 67706968 -35788006 + (TTG)n Simple_repeat Simple_repeat 2 33 0 3 1101 1171 84 12 0 chr15 67707011 67707177 -35787797 - B2_Mm1a SINE B2 -3 190 23 3 1101 577 295 77 74 chr15 67707177 67707528 -35787446 + MLT1B LTR MaLR 35 386 -4 3 1101 303 28 0 0 chr15 67709330 67709366 -35785608 + (CTATT)n Simple_repeat Simple_repeat 4 39 0 3 1101 1473 229 126 3 chr15 67709375 67709748 -35785226 + MTD LTR MaLR 1 419 0 3 1101 331 351 119 34 chr15 67710118 67710413 -35784561 - L2 LINE L2 -655 2764 2445 3 1101 789 167 0 22 chr15 67710431 67710566 -35784408 - B1_Mur3 SINE Alu -16 133 2 3 1101 26 0 0 0 chr15 67710568 67710594 -35784380 + AT_rich Low_complexity Low_complexity 1 26 0 3 1101 644 296 15 15 chr15 67710595 67710797 -35784177 - B3 SINE B2 -1 215 14 3 1101 260 247 12 47 chr15 67710912 67710997 -35783977 + MIRc SINE MIR 64 145 -123 3 1101 804 287 144 34 chr15 67711121 67711503 -35783471 + MLT1C LTR MaLR 44 467 0 3 1101 783 353 22 14 chr15 67712933 67713209 -35781765 - B4 SINE B4 0 292 15 3 1101 429 20 0 0 chr15 67714940 67714990 -35779984 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 3 1101 506 267 38 45 chr15 67715767 67715924 -35779050 - MER58A DNA MER1_type -13 211 56 3 1101 351 0 0 0 chr15 67716166 67716205 -35778769 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 3 1101 318 300 120 0 chr15 67716229 67716329 -35778645 + PB1 SINE Alu 6 117 -10 3 1101 939 280 109 29 chr15 67716614 67716927 -35778047 + MTD LTR MaLR 46 383 -36 3 1101 33 0 0 0 chr15 67717370 67717403 -35777571 + AT_rich Low_complexity Low_complexity 1 33 0 3 1101 255 125 0 0 chr15 67718651 67718691 -35776283 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 1101 1146 64 0 0 chr15 67718693 67718834 -35776140 - B1_Mm SINE Alu -6 141 1 3 1101 279 294 0 0 chr15 67718860 67718928 -35776046 + MLT1E1 LTR MaLR 568 635 -19 3 1101 1803 187 93 79 chr15 67719360 67719854 -35775120 + RLTR11A LTR ERVK 1 501 -27 3 1101 391 306 125 35 chr15 67721224 67721424 -35773550 - MIRb SINE MIR -14 254 37 3 1101 632 268 62 66 chr15 67721424 67721744 -35773230 + MER33 DNA MER1_type 1 319 -5 3 1101 201 291 38 12 chr15 67722277 67722357 -35772617 - MIR SINE MIR -39 223 142 3 1101 1055 104 6 0 chr15 67722691 67722855 -35772119 + (CTGGGG)n Simple_repeat Simple_repeat 3 167 0 3 1101 186 71 0 0 chr15 67723050 67723078 -35771896 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 3 1101 978 242 6 0 chr15 67723087 67723269 -35771705 - B3 SINE B2 -33 183 1 3 1101 202 261 0 0 chr15 67723290 67723336 -35771638 + MIRm SINE MIR 209 254 -22 3 1101 234 221 62 21 chr15 67724133 67724230 -35770744 + L1MC4 LINE L1 7122 7222 -820 3 1101 838 272 63 96 chr15 67724480 67724846 -35770128 + ORR1E LTR MaLR 6 359 0 3 1101 790 253 71 20 chr15 67725059 67725090 -35769884 + B3 SINE B2 1 28 -188 3 1101 757 67 0 143 chr15 67725090 67725230 -35769744 + L1Md_F2 LINE L1 6462 6581 -1 3 1101 790 253 71 20 chr15 67725230 67725396 -35769578 + B3 SINE B2 29 208 -8 3 1101 2152 295 20 24 chr15 67725578 67726168 -35768806 - Lx5 LINE L1 -4 7046 6459 3 1101 405 308 33 70 chr15 67726544 67726785 -35768189 + LTR16C LTR ERVL 257 488 -1 3 1101 609 27 0 0 chr15 67727087 67727162 -35767812 + (TG)n Simple_repeat Simple_repeat 2 76 0 3 1101 871 238 24 0 chr15 67727163 67727331 -35767643 - B3 SINE B2 -27 189 18 3 1101 201 132 0 0 chr15 67727495 67727533 -35767441 + (TC)n Simple_repeat Simple_repeat 1 38 0 3 1101 214 339 3 3 chr15 67727641 67727730 -35767244 - MIRm SINE MIR -151 125 30 3 1101 694 270 59 15 chr15 67727780 67727983 -35766991 + B3 SINE B2 1 212 -4 3 1101 270 0 0 0 chr15 67728025 67728055 -35766919 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1101 405 0 0 0 chr15 67728927 67728972 -35766002 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 1101 363 266 17 34 chr15 67729113 67729288 -35765686 + (TATATG)n Simple_repeat Simple_repeat 2 173 0 3 1101 184 196 28 38 chr15 67729329 67729435 -35765539 + (TATATG)n Simple_repeat Simple_repeat 4 108 0 3 1101 214 233 11 11 chr15 67729534 67729621 -35765353 + (CATATA)n Simple_repeat Simple_repeat 4 90 0 3 1101 387 0 0 0 chr15 67729888 67729931 -35765043 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1101 340 289 119 125 chr15 67731353 67731681 -35763293 + ORR1E LTR MaLR 32 357 -2 3 1101 510 353 38 23 chr15 67731798 67732062 -35762912 - LTR16C LTR ERVL -78 411 144 3 1101 234 186 94 38 chr15 67733351 67733457 -35761517 + MIR SINE MIR 25 136 -126 3 1101 225 308 25 101 chr15 67733600 67733759 -35761215 + MIRb SINE MIR 48 194 -74 3 1101 252 0 0 0 chr15 67733915 67733943 -35761031 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1101 228 321 93 83 chr15 67733955 67734159 -35760815 - MIRb SINE MIR -37 231 26 3 1101 260 299 203 8 chr15 67734262 67734380 -35760594 - MIRb SINE MIR -74 194 54 3 1101 315 0 0 0 chr15 67735216 67735251 -35759723 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1101 579 29 0 0 chr15 67735251 67735319 -35759655 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 1101 366 23 0 0 chr15 67737166 67737209 -35757765 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 3 1101 2414 117 42 54 chr15 67737299 67737705 -35757269 - Lx LINE L1 -5 6649 6249 3 1101 4606 139 79 0 chr15 67737706 67738469 -35756505 + L1_Mm LINE L1 4755 5577 -306 3 1101 5646 198 28 10 chr15 67739075 67740095 -35754879 - Lx5 LINE L1 0 7050 6012 3 1101 2296 151 0 0 chr15 67740095 67740453 -35754521 + Lx5 LINE L1 5640 5997 -1053 3 1101 1718 177 18 67 chr15 67741090 67741839 -35753135 + L1_Mur2 LINE L1 841 1567 -4310 3 1101 3358 32 7 2 chr15 67741843 67742333 -35752641 + L1Md_T LINE L1 1 561 -5961 3 1101 36291 35 1 0 chr15 67742324 67748337 -35746637 + L1Md_T LINE L1 1 5589 -297 3 1101 8542 57 0 0 chr15 67748337 67749333 -35745641 + L1Md_T LINE L1 5590 6585 0 3 1101 3063 14 0 0 chr15 67749338 67749682 -35745292 + L1Md_T LINE L1 5243 5586 -297 3 1101 9588 6 0 0 chr15 67749682 67750678 -35744296 + L1Md_T LINE L1 5587 6582 0 3 1101 8019 145 140 17 chr15 67750681 67751132 -35743842 + L1_Mur2 LINE L1 1557 2048 -3829 3 1101 219 125 0 0 chr15 67751132 67751172 -35743802 + (CATA)n Simple_repeat Simple_repeat 2 41 0 3 1101 8019 145 140 17 chr15 67751172 67752458 -35742516 + L1_Mur2 LINE L1 2049 3507 -2370 3 1101 3068 124 29 2 chr15 67752461 67752947 -35742027 + L1_Mur2 LINE L1 4958 5456 -421 3 1101 1792 161 42 55 chr15 67752925 67753326 -35741648 + Lx4B LINE L1 6663 7058 0 3 1101 1034 144 0 6 chr15 67753484 67753665 -35741309 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 1101 400 309 65 7 chr15 67754967 67755120 -35739854 - MER70B LTR ERVL -415 163 2 3 1101 2409 200 35 10 chr15 67755278 67755758 -35739216 - Lx9 LINE L1 -226 7418 6927 3 1101 704 220 52 39 chr15 67755758 67755848 -35739126 + Lx9 LINE L1 7409 7501 -143 3 1101 324 0 0 0 chr15 67755848 67755884 -35739090 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1101 704 220 52 39 chr15 67755884 67756025 -35738949 + Lx9 LINE L1 7502 7643 -1 3 1101 802 204 12 35 chr15 67756845 67757018 -35737956 - Lx9 LINE L1 -219 7425 7257 3 1101 256 196 0 0 chr15 67757438 67757484 -35737490 - Lx9 LINE L1 -369 7275 7230 3 1101 321 232 0 0 chr15 67757484 67757626 -35737348 + (CATATA)n Simple_repeat Simple_repeat 3 144 0 3 1101 322 198 30 67 chr15 67757650 67757785 -35737189 + Lx9 LINE L1 7500 7629 -15 3 1101 220 292 46 0 chr15 67758656 67758721 -35736253 - MIRb SINE MIR -191 77 10 3 1101 1504 246 40 43 chr15 67758974 67759344 -35735630 + ORR1C1 LTR MaLR 5 373 -5 3 1101 223 267 0 0 chr15 67759780 67759840 -35735134 + (CATATA)n Simple_repeat Simple_repeat 6 65 0 3 1101 246 330 143 33 chr15 67760312 67760494 -35734480 - ORR1E LTR MaLR -115 244 43 3 1101 480 369 25 5 chr15 67761701 67761900 -35733074 + LTR16C LTR ERVL 275 477 -12 3 1101 1857 205 66 94 chr15 67763164 67763782 -35731192 - MT2B LTR ERVL 0 601 1 3 1102 375 340 79 66 chr15 67765024 67765329 -35729645 + MLT1C LTR MaLR 2 310 -157 3 1102 449 350 0 12 chr15 67765334 67765499 -35729475 + RSINE1 SINE B4 2 164 -1 3 1102 247 316 79 0 chr15 67765528 67765604 -35729370 + MLT1C LTR MaLR 307 388 -117 3 1102 207 0 0 0 chr15 67765768 67765791 -35729183 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1102 1006 270 9 26 chr15 67765897 67766125 -35728849 + B4A SINE B4 2 225 -67 3 1102 3274 174 17 52 chr15 67766668 67767317 -35727657 + RMER20B LTR ERVK 1 626 -1 3 1102 1498 138 112 147 chr15 67769038 67769412 -35725562 - ORR1C2 LTR MaLR 0 384 24 3 1102 397 346 36 7 chr15 67769435 67769572 -35725402 + MLT1J1 LTR MaLR 63 203 -241 3 1102 381 328 16 8 chr15 67769609 67769732 -35725242 + RSINE1 SINE B4 13 136 -29 3 1102 276 299 6 67 chr15 67770503 67770647 -35724327 - MLT1I LTR MaLR -223 188 59 3 1102 410 361 14 14 chr15 67770757 67770903 -35724071 + Tigger5 DNA MER2_type 99 244 -2162 3 1102 342 0 0 0 chr15 67772782 67772820 -35722154 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1102 1623 244 25 16 chr15 67773189 67773635 -35721339 - Lx8 LINE L1 -1545 5928 5472 4 1102 1188 336 24 15 chr15 67773652 67774117 -35720857 + Lx8 LINE L1 6537 7005 -468 4 1102 326 336 71 14 chr15 67776206 67776383 -35718591 - MIRb SINE MIR -54 214 17 4 1102 2305 278 29 57 chr15 67776448 67776761 -35718213 + RCHARR1 DNA MER1_type 29 335 -639 4 1102 2089 158 81 18 chr15 67776761 67777142 -35717832 - MTB_Mm LTR MaLR 0 407 3 4 1102 2305 278 29 57 chr15 67777142 67777552 -35717422 + RCHARR1 DNA MER1_type 336 731 -243 4 1102 438 20 0 0 chr15 67777606 67777657 -35717317 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1102 730 274 185 16 chr15 67777702 67777891 -35717083 - B4A SINE B4 0 292 101 4 1102 369 0 0 0 chr15 67777891 67777932 -35717042 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1102 730 274 185 16 chr15 67777932 67777991 -35716983 - B4A SINE B4 -192 100 3 4 1102 737 185 112 43 chr15 67777991 67778223 -35716751 + RCHARR1 DNA MER1_type 727 974 0 4 1102 224 383 69 30 chr15 67778224 67778426 -35716548 + MIR SINE MIR 32 241 -21 4 1102 4751 131 34 34 chr15 67778535 67779272 -35715702 - RMER19A LTR ERVK 0 737 1 4 1102 510 370 12 6 chr15 67780551 67780717 -35714257 - B4A SINE B4 -113 179 13 4 1102 218 32 32 0 chr15 67780776 67780807 -35714167 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 4 1102 279 113 0 0 chr15 67781038 67781091 -35713883 + (TGG)n Simple_repeat Simple_repeat 1 53 0 4 1102 265 273 110 55 chr15 67781116 67781279 -35713695 + L2 LINE L2 2717 2888 -531 4 1102 376 253 0 11 chr15 67781440 67781528 -35713446 - MTEb LTR MaLR -4 375 289 4 1102 193 329 109 7 chr15 67783396 67783543 -35711431 - L2a LINE L2 -115 3311 3150 4 1102 614 303 122 21 chr15 67783552 67783879 -35711095 - MLT1A0 LTR MaLR -1 364 5 4 1102 1768 258 152 36 chr15 67784430 67785361 -35709613 + Lx8 LINE L1 6083 7121 -352 4 1102 249 85 0 92 chr15 67785653 67785718 -35709256 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 4 1102 702 0 0 0 chr15 67785723 67785801 -35709173 + (GGAGA)n Simple_repeat Simple_repeat 2 79 0 4 1102 632 238 40 23 chr15 67785996 67786172 -35708802 + Tigger15a DNA TcMar 476 654 -61 4 1102 210 353 117 26 chr15 67786257 67786411 -35708563 - MIRc SINE MIR -44 224 57 4 1102 534 57 0 0 chr15 67786652 67786722 -35708252 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 1102 408 40 0 0 chr15 67787251 67787301 -35707673 + (TTCC)n Simple_repeat Simple_repeat 3 52 0 4 1102 500 208 10 0 chr15 67787315 67787416 -35707558 - ID_B1 SINE B4 0 224 123 4 1102 1691 72 29 25 chr15 67787585 67787826 -35707148 + L1_Mus2 LINE L1 6323 6564 -2 4 1102 9182 159 17 18 chr15 67787873 67788809 -35706165 - Lx5 LINE L1 -921 6129 5179 4 1102 7875 82 24 8 chr15 67788809 67789816 -35705158 + RLTR13D5 LTR ERVK 1 1023 0 4 1102 9182 150 21 22 chr15 67789816 67790707 -35704267 - Lx5 LINE L1 -699 5178 4296 4 1102 4706 197 24 5 chr15 67790709 67791551 -35703423 + Lx5 LINE L1 6182 7039 -11 4 1102 1221 88 0 0 chr15 67791573 67791720 -35703254 + B1_Mm SINE Alu 1 147 0 4 1102 315 0 0 0 chr15 67791720 67791755 -35703219 + (A)n Simple_repeat Simple_repeat 1 35 0 4 1102 508 281 247 4 chr15 67791786 67792029 -35702945 - Lx7 LINE L1 -236 7237 6925 4 1102 260 196 39 19 chr15 67792031 67792083 -35702891 - ID SINE ID -170 54 2 4 1102 180 0 0 0 chr15 67792539 67792559 -35702415 + (TTTAA)n Simple_repeat Simple_repeat 1 20 0 4 1102 351 337 86 24 chr15 67793338 67793404 -35701570 + MuRRS4-int LTR ERV1 4663 4746 -317 4 1102 443 18 0 18 chr15 67793404 67793461 -35701513 + (GA)n Simple_repeat Simple_repeat 2 57 0 4 1102 351 337 86 24 chr15 67793461 67793649 -35701325 + MuRRS4-int LTR ERV1 4747 4933 -130 4 1102 2232 85 154 0 chr15 67793730 67794119 -35700855 + RLTR47_MM LTR ERV1 1 449 -83 4 1102 324 185 11 32 chr15 67794270 67794365 -35700609 + CT-rich Low_complexity Low_complexity 5 97 0 4 1102 233 322 50 25 chr15 67794385 67794506 -35700468 + MTE2b LTR MaLR 241 364 -15 4 1102 2295 312 82 40 chr15 67795095 67796199 -35698775 + Lx8 LINE L1 6314 7464 -9 4 1102 301 25 0 0 chr15 67796879 67796919 -35698055 - L1_Mus2 LINE L1 -1 6565 6526 4 1102 850 272 78 83 chr15 67797664 67797927 -35697047 - L1MB7 LINE L1 -97 6087 5829 4 1102 607 254 22 7 chr15 67797927 67798062 -35696912 - B1F SINE Alu -11 138 2 4 1102 850 272 78 83 chr15 67798062 67798270 -35696704 - L1MB7 LINE L1 -356 5828 5618 4 1102 687 231 0 0 chr15 67798362 67798483 -35696491 + RSINE1 SINE B4 2 122 -43 4 1102 401 0 0 20 chr15 67798503 67798553 -35696421 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1102 2995 65 0 13 chr15 67798795 67799169 -35695805 + L1Md_F2 LINE L1 6213 6581 -1 4 1102 846 287 37 0 chr15 67799242 67799458 -35695516 + B4 SINE B4 69 292 0 4 1102 24 0 0 0 chr15 67800041 67800065 -35694909 + AT_rich Low_complexity Low_complexity 1 24 0 4 1102 1280 42 7 0 chr15 67800100 67800244 -35694730 - B1_Mus2 SINE Alu -1 146 2 4 1102 195 260 40 14 chr15 67800743 67800817 -35694157 - L2a LINE L2 -14 3412 3337 4 1102 1522 321 81 21 chr15 67801111 67801780 -35693194 + MER44C DNA MER2_type 12 720 -13 4 1102 5226 169 11 38 chr15 67802076 67803009 -35691965 - RMER13B LTR ERVK 0 908 1 4 1102 1290 258 0 3 chr15 67804195 67804491 -35690483 + Lx5 LINE L1 6756 7050 0 4 1102 249 345 36 18 chr15 67804608 67804720 -35690254 - B1_Mur4 SINE Alu 0 150 37 4 1102 266 359 104 59 chr15 67805063 67805285 -35689689 - LTR16C LTR ERVL -113 376 145 4 1102 364 300 86 40 chr15 67805479 67805677 -35689297 + MLT1D LTR MaLR 34 240 -265 4 1102 429 293 85 11 chr15 67805711 67805887 -35689087 + MLT1D LTR MaLR 316 504 -1 4 1102 868 233 93 108 chr15 67806251 67806583 -35688391 - MTE2a LTR MaLR 0 379 53 4 1102 1293 256 13 78 chr15 67807138 67807319 -35687655 + MTEa LTR MaLR 11 187 -192 4 1102 1070 19 45 0 chr15 67807319 67807476 -35687498 + (TCTA)n Simple_repeat Simple_repeat 1 164 0 4 1102 1293 256 13 78 chr15 67807476 67807667 -35687307 + MTEa LTR MaLR 188 359 -20 4 1102 288 300 58 19 chr15 67809172 67809299 -35685675 - MIR SINE MIR -118 150 24 4 1102 430 243 59 93 chr15 67809426 67809630 -35685344 + B3A SINE B2 2 198 0 4 1102 315 0 0 0 chr15 67809959 67809994 -35684980 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1102 411 21 0 0 chr15 67810288 67810336 -35684638 + (GA)n Simple_repeat Simple_repeat 2 49 0 4 1102 429 20 0 0 chr15 67810467 67810517 -35684457 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1102 438 322 14 7 chr15 67811016 67811160 -35683814 + MER5A1 DNA MER1_type 22 166 0 4 1102 494 261 40 60 chr15 67812677 67812828 -35682146 - MTE2b LTR MaLR -6 373 226 4 1102 2402 171 12 10 chr15 67812830 67813238 -35681736 + MTC LTR MaLR 5 413 -8 4 1102 762 225 134 43 chr15 67813214 67813446 -35681528 - MTE2b LTR MaLR -115 264 12 4 1102 185 306 186 39 chr15 67813693 67813897 -35681077 - L4 LINE RTE -15 2014 1781 4 1102 225 0 0 0 chr15 67814695 67814720 -35680254 + (GTTTG)n Simple_repeat Simple_repeat 1 25 0 4 1102 216 365 150 0 chr15 67815112 67815279 -35679695 - MIRb SINE MIR -51 217 26 4 1102 635 238 13 26 chr15 67815981 67816132 -35678842 - B1F1 SINE Alu 0 149 1 4 1102 235 282 26 26 chr15 67816180 67816293 -35678681 + CT-rich Low_complexity Low_complexity 1 113 0 4 1102 191 170 21 0 chr15 67816305 67816352 -35678622 + C-rich Low_complexity Low_complexity 3 50 0 4 1102 326 320 21 0 chr15 67817326 67817423 -35677551 + ID_B1 SINE B4 120 218 -6 4 1102 370 77 0 0 chr15 67817427 67817479 -35677495 + B3A SINE B2 2 53 -145 4 1102 614 303 112 28 chr15 67817509 67818343 -35676631 + L1MB8 LINE L1 3689 4592 -1554 4 1102 3390 61 23 0 chr15 67818622 67819013 -35675961 + MTB LTR MaLR 1 400 0 4 1102 379 344 12 6 chr15 67819063 67819224 -35675750 + L1M4 LINE L1 314 475 -6067 4 1102 499 318 31 15 chr15 67819243 67819502 -35675472 + L1M4 LINE L1 1428 1690 -4852 4 1102 321 82 0 0 chr15 67819502 67819552 -35675422 + MTB LTR MaLR 215 264 -143 4 1102 421 311 178 9 chr15 67819601 67819938 -35675036 + L1M4 LINE L1 5156 5549 -1092 4 1102 669 248 8 0 chr15 67819944 67820077 -35674897 + B4A SINE B4 5 138 -154 4 1102 441 54 0 0 chr15 67820080 67820136 -35674838 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 1102 879 192 0 0 chr15 67820136 67820313 -35674661 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 4 1102 725 179 0 0 chr15 67820319 67820436 -35674538 - B1_Mur2 SINE Alu -9 140 24 4 1102 241 246 0 0 chr15 67820509 67820574 -35674400 + L1MC LINE L1 5212 5276 -870 4 1102 436 305 143 22 chr15 67820592 67821054 -35673920 + L1MB8 LINE L1 5306 5823 -355 4 1102 437 308 66 59 chr15 67821055 67821207 -35673767 + RSINE1 SINE B4 11 163 -2 4 1102 629 285 72 38 chr15 67821237 67821583 -35673391 + L1MB8 LINE L1 5821 6178 0 4 1102 711 265 118 66 chr15 67821923 67822194 -35672780 + B4A SINE B4 8 292 0 4 1102 317 353 57 14 chr15 67823122 67823332 -35671642 + L2 LINE L2 2446 2664 -755 4 1102 495 87 0 0 chr15 67823574 67823643 -35671331 + (CA)n Simple_repeat Simple_repeat 1 69 0 4 1102 2986 76 43 33 chr15 67824198 67824594 -35670380 - MTB LTR MaLR 0 400 1 4 1102 188 86 0 28 chr15 67824640 67824676 -35670298 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 1102 1179 266 80 9 chr15 67824950 67825287 -35669687 + MLT1A0 LTR MaLR 1 361 -4 4 1102 300 327 88 38 chr15 67825738 67825897 -35669077 + MER3 DNA MER1_type 17 183 -26 4 1102 201 154 0 0 chr15 67827212 67827251 -35667723 + (TATG)n Simple_repeat Simple_repeat 2 40 0 4 1102 279 318 113 36 chr15 67827880 67828102 -35666872 - MIR SINE MIR -16 246 8 4 1102 483 48 0 0 chr15 67829471 67829533 -35665441 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 1102 462 18 0 0 chr15 67829533 67829587 -35665387 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 1102 1531 43 48 0 chr15 67829597 67829783 -35665191 + B2_Mm2 SINE B2 1 195 0 4 1102 1421 100 8 5 chr15 67829889 67830118 -35664856 + L1_Mus3 LINE L1 6070 6296 -288 4 1102 17069 24 0 0 chr15 67830121 67832753 -35662221 - L1Md_A LINE L1 0 6582 3950 4 1102 3414 51 0 15 chr15 67832760 67833162 -35661812 - MTA_Mm LTR MaLR 0 396 1 4 1102 2549 100 11 8 chr15 67833162 67833559 -35661415 + L1_Mus3 LINE L1 6285 6638 0 4 1102 201 74 0 0 chr15 67834068 67834095 -35660879 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 4 1102 258 306 69 0 chr15 67834315 67834387 -35660587 + MIRb SINE MIR 47 123 -145 5 1102 1839 50 0 5 chr15 67834429 67834650 -35660324 - L1Md_F2 LINE L1 -12 6570 6351 5 1102 3886 93 123 2 chr15 67834680 67835216 -35659758 + MT2B LTR ERVL 1 601 0 5 1102 243 0 0 0 chr15 67836044 67836071 -35658903 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1102 224 223 77 4 chr15 67836923 67836988 -35657986 - L2c LINE L2 -1 3425 3334 5 1102 201 39 0 0 chr15 67837098 67837124 -35657850 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1102 563 164 44 26 chr15 67838467 67838580 -35656394 - RLTR13D3 LTR ERVK 0 1114 1000 5 1102 370 339 35 30 chr15 67838942 67839191 -35655783 - RLTR3_Mm LTR ERVK -522 806 459 5 1102 359 226 82 126 chr15 67839429 67839611 -35655363 - RLTR13D3 LTR ERVK -940 174 1 5 1102 2187 142 19 0 chr15 67839763 67840081 -35654893 - ORR1A3 LTR MaLR -2 324 1 5 1102 381 282 35 7 chr15 67840096 67840239 -35654735 + L1MEb LINE L1 727 873 -5197 5 1102 290 322 83 25 chr15 67840244 67840365 -35654609 + B1F1 SINE Alu 13 140 -9 5 1102 7070 136 18 7 chr15 67840606 67841679 -35653295 + Lx2 LINE L1 5908 6992 -5 5 1102 491 279 131 77 chr15 67841833 67842172 -35652802 + Lx8 LINE L1 6947 7327 -146 5 1102 306 0 0 0 chr15 67842172 67842206 -35652768 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1102 491 279 131 77 chr15 67842206 67842344 -35652630 + Lx8 LINE L1 7328 7454 -19 5 1102 330 26 0 0 chr15 67842344 67842383 -35652591 + (GGA)n Simple_repeat Simple_repeat 1 39 0 5 1102 491 279 131 77 chr15 67842383 67842400 -35652574 + Lx8 LINE L1 7455 7468 -5 5 1102 693 292 100 40 chr15 67843022 67843540 -35651434 - LTR48B LTR ERV1 -41 746 8 5 1102 802 235 43 11 chr15 67844545 67844730 -35650244 - MTEa LTR MaLR -188 191 1 5 1102 563 257 67 7 chr15 67844767 67844916 -35650058 + MTD LTR MaLR 262 419 0 5 1102 385 200 121 11 chr15 67844962 67845128 -35649846 - L1MB8 LINE L1 -239 5940 5762 5 1102 189 0 0 0 chr15 67845418 67845439 -35649535 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 5 1102 441 0 0 0 chr15 67845806 67845855 -35649119 + (TATG)n Simple_repeat Simple_repeat 2 50 0 5 1102 766 272 33 6 chr15 67845855 67846036 -35648938 - B3 SINE B2 -15 201 16 5 1102 783 291 84 13 chr15 67846041 67846351 -35648623 + MLT1A0 LTR MaLR 34 365 0 5 1102 2405 113 3 12 chr15 67847248 67847578 -35647396 + ORR1A2 LTR MaLR 1 327 0 5 1102 2323 89 63 9 chr15 67847859 67848178 -35646796 + L1Md_F2 LINE L1 6247 6582 0 5 1102 1096 82 0 64 chr15 67848190 67848347 -35646627 + B1_Mm SINE Alu 1 147 0 5 1102 230 21 85 0 chr15 67848347 67848394 -35646580 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 5 1102 27046 149 9 16 chr15 67848906 67853535 -35641439 - L1Md_F LINE L1 -96 5787 1191 5 1102 5522 245 73 44 chr15 67853636 67854987 -35639987 + Lx6 LINE L1 5925 7321 -139 5 1102 2094 143 38 3 chr15 67854987 67855302 -35639672 - ORR1A3 LTR MaLR 0 326 1 5 1102 5522 245 73 44 chr15 67855302 67855436 -35639538 + Lx6 LINE L1 7322 7452 -8 5 1102 231 339 8 31 chr15 67855440 67855568 -35639406 - L1MB4 LINE L1 -6 6174 6050 5 1102 397 246 5 84 chr15 67855990 67856181 -35638793 + CT-rich Low_complexity Low_complexity 4 179 0 5 1102 490 246 32 23 chr15 67856490 67856663 -35638311 - L1MA4 LINE L1 -376 5924 5743 5 1102 1287 242 119 39 chr15 67856665 67857004 -35637970 + MTE2b LTR MaLR 11 370 0 5 1102 429 234 84 8 chr15 67857178 67857313 -35637661 - MTD LTR MaLR -2 417 261 5 1102 8053 67 11 3 chr15 67857350 67858548 -35636426 - L1_Mus1 LINE L1 0 6654 5394 5 1102 851 210 103 16 chr15 67858548 67858732 -35636242 - MTD LTR MaLR -209 210 11 5 1102 323 367 49 62 chr15 67859520 67859764 -35635210 + MLT1K LTR MaLR 79 319 -276 5 1102 284 357 75 20 chr15 67859789 67859935 -35635039 + MLT1K LTR MaLR 385 538 -57 5 1102 228 368 81 76 chr15 67860366 67860551 -35634423 + LTR16A1 LTR ERVL 6 191 -265 5 1102 696 319 47 22 chr15 67862700 67862976 -35631998 + B4 SINE B4 4 286 -6 5 1102 453 110 0 0 chr15 67863006 67863079 -35631895 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 1102 333 141 0 0 chr15 67863136 67863207 -35631767 + (A)n Simple_repeat Simple_repeat 1 71 0 5 1102 269 26 26 0 chr15 67863200 67863238 -35631736 + (CAA)n Simple_repeat Simple_repeat 2 40 0 5 1102 36355 46 0 3 chr15 67863775 67869161 -35625813 + L1Md_T LINE L1 126 5590 -296 5 1102 8957 35 0 0 chr15 67869162 67870156 -35624818 + L1Md_T LINE L1 5592 6585 0 5 1102 272 397 74 3 chr15 67870277 67870530 -35624444 + L2a LINE L2 2832 3106 -269 5 1102 198 336 87 32 chr15 67870748 67870874 -35624100 + MIRm SINE MIR 39 171 -105 5 1102 239 331 90 51 chr15 67871575 67871731 -35623243 + MIR SINE MIR 92 253 -9 5 1102 248 136 34 0 chr15 67871781 67871840 -35623134 + (TCTCTG)n Simple_repeat Simple_repeat 4 64 0 5 1102 29 28 0 0 chr15 67872809 67872845 -35622129 + AT_rich Low_complexity Low_complexity 1 36 0 5 1102 669 315 70 28 chr15 67872899 67873258 -35621716 - ERVL-E-int LTR ERVL -1119 4548 4175 5 1102 329 328 66 50 chr15 67873418 67873659 -35621315 - ERVL-E-int LTR ERVL -2378 3289 3045 5 1102 1238 269 230 9 chr15 67873790 67874397 -35620577 - Lx8 LINE L1 -3 7470 6723 5 1102 251 314 118 59 chr15 67874402 67874656 -35620318 - ERVL-E-int LTR ERVL -2834 2833 2565 5 1102 553 342 118 51 chr15 67874688 67875258 -35619716 - ERVL-E-int LTR ERVL -3146 2521 1914 5 1102 195 42 0 0 chr15 67876958 67876982 -35617992 + (CAA)n Simple_repeat Simple_repeat 1 24 0 5 1102 330 327 11 61 chr15 67878535 67878740 -35616234 + MIRb SINE MIR 15 219 -49 5 1102 258 105 0 0 chr15 67879154 67879192 -35615782 + (ATG)n Simple_repeat Simple_repeat 3 40 0 5 1102 249 248 99 54 chr15 67879800 67879911 -35615063 - MIRm SINE MIR -136 140 25 5 1102 250 333 33 72 chr15 67880823 67881004 -35613970 - L2b LINE L2 -250 3125 2952 5 1102 3827 43 20 0 chr15 67881700 67882144 -35612830 + L1Md_F3 LINE L1 6132 6584 0 5 1102 865 278 6 6 chr15 67882356 67882537 -35612437 + B4 SINE B4 110 290 -2 5 1102 208 340 39 0 chr15 67882549 67882652 -35612322 + (CATA)n Simple_repeat Simple_repeat 1 107 0 5 1102 366 23 0 0 chr15 67884018 67884061 -35610913 + (TTTTTG)n Simple_repeat Simple_repeat 6 48 0 5 1102 859 45 9 0 chr15 67884061 67884173 -35610801 - B1_Mm SINE Alu 0 147 35 5 1102 1065 257 102 48 chr15 67885911 67886263 -35608711 + MTEa LTR MaLR 8 378 -1 5 1102 1339 27 0 0 chr15 67886473 67886619 -35608355 - B1_Mm SINE Alu 0 147 2 5 1102 195 296 0 69 chr15 67887024 67887111 -35607863 - L2c LINE L2 -5 3382 3302 5 1102 1608 327 85 20 chr15 67887162 67888001 -35606973 + MER63C DNA AcHobo 1 893 -37 5 1102 279 0 0 0 chr15 67888357 67888388 -35606586 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1102 183 42 0 0 chr15 67888456 67888480 -35606494 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 5 1102 279 314 77 80 chr15 67888726 67889128 -35605846 - L1MEb LINE L1 -5663 407 7 5 1102 207 100 0 0 chr15 67890150 67890180 -35604794 - L2c LINE L2 0 3387 3358 5 1102 2718 242 22 47 chr15 67890658 67891786 -35603188 + Lx5 LINE L1 5653 6899 -561 5 1102 363 44 0 0 chr15 67892485 67892530 -35602444 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 1102 719 190 218 0 chr15 67892984 67893158 -35601816 - B3 SINE B2 -2 214 3 5 1102 954 275 82 44 chr15 67893367 67893732 -35601242 + MTEb LTR MaLR 1 379 0 5 1102 401 283 153 17 chr15 67894040 67894216 -35600758 - MLT2C1 LTR ERVL -172 225 26 5 1102 336 324 160 27 chr15 67894346 67894565 -35600409 + Lx8 LINE L1 6966 7213 -260 5 1102 1269 12 53 0 chr15 67894565 67894734 -35600240 + (GGGAGA)n Simple_repeat Simple_repeat 1 178 0 5 1103 368 287 138 113 chr15 67895318 67895688 -35599286 - MTEa LTR MaLR 0 379 1 5 1103 221 268 58 80 chr15 67896937 67897075 -35597899 - L2c LINE L2 -228 3159 3025 5 1103 275 302 202 5 chr15 67897184 67897377 -35597597 - L2c LINE L2 -556 2863 2633 5 1103 710 292 114 32 chr15 67897916 67898288 -35596686 + ORR1E LTR MaLR 2 359 0 5 1103 1851 160 25 64 chr15 67898466 67898631 -35596343 + ORR1B1 LTR MaLR 41 188 -206 5 1103 594 0 0 0 chr15 67898631 67898697 -35596277 + (TC)n Simple_repeat Simple_repeat 1 66 0 5 1103 1851 160 25 64 chr15 67898697 67898891 -35596083 + ORR1B1 LTR MaLR 189 385 -9 5 1103 402 284 194 0 chr15 67899700 67899855 -35595119 - RMER15 LTR ERVL -20 555 371 5 1103 23 0 0 0 chr15 67900226 67900249 -35594725 + AT_rich Low_complexity Low_complexity 1 23 0 5 1103 701 260 36 63 chr15 67900251 67900473 -35594501 - B3 SINE B2 0 216 1 5 1103 2841 113 21 2 chr15 67901093 67901526 -35593448 - BGLII_B LTR ERVK 0 441 1 5 1103 1620 74 0 9 chr15 67907468 67907685 -35587289 - L1_Mus2 LINE L1 0 6566 6352 5 1103 374 0 0 21 chr15 67907815 67907862 -35587112 + (TAA)n Simple_repeat Simple_repeat 3 48 0 5 1103 617 359 68 5 chr15 67908174 67908381 -35586593 + MER58A DNA MER1_type 4 223 -1 5 1103 278 227 176 7 chr15 67909330 67909472 -35585502 + RMER17C LTR ERVK 137 302 -108 5 1103 7404 53 10 3 chr15 67910739 67911648 -35583326 + L1_Mus1 LINE L1 5653 6567 0 5 1103 742 215 96 43 chr15 67913014 67913148 -35581826 - Lx9 LINE L1 -6 7638 7498 5 1103 297 0 0 0 chr15 67913148 67913181 -35581793 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 1103 742 215 96 43 chr15 67913181 67913328 -35581646 - Lx9 LINE L1 -147 7497 7342 5 1103 216 0 0 0 chr15 67914404 67914428 -35580546 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1103 198 348 81 47 chr15 67918228 67918400 -35576574 - MIRb SINE MIR -72 196 19 5 1103 267 31 0 0 chr15 67920730 67920762 -35574212 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1103 270 0 0 0 chr15 67920762 67920791 -35574183 + (GA)n Simple_repeat Simple_repeat 1 30 0 5 1103 1837 159 0 13 chr15 67920865 67921164 -35573810 + MTC LTR MaLR 8 302 -119 5 1103 465 155 2 34 chr15 67924314 67924412 -35570562 - ORR1D2 LTR MaLR 0 419 293 5 1103 186 43 0 0 chr15 67924433 67924456 -35570518 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 5 1103 651 348 31 65 chr15 67924733 67925087 -35569887 - MLT1A0 LTR MaLR -20 345 4 5 1103 297 317 0 0 chr15 67925246 67925328 -35569646 + ID4_ SINE ID 1 82 -1 6 1103 464 285 92 16 chr15 67925492 67925711 -35569263 - MIRb SINE MIR -6 262 26 6 1103 546 91 0 0 chr15 67928875 67928952 -35566022 + (CA)n Simple_repeat Simple_repeat 2 78 0 6 1103 25 0 0 0 chr15 67929724 67929749 -35565225 + AT_rich Low_complexity Low_complexity 1 25 0 6 1103 265 329 56 42 chr15 67929762 67929965 -35565009 + ORR1E LTR MaLR 18 215 -155 6 1103 811 266 39 0 chr15 67930017 67930220 -35564754 + B4A SINE B4 71 281 -11 6 1103 263 28 28 0 chr15 67930885 67930921 -35564053 + (TCCC)n Simple_repeat Simple_repeat 3 39 0 6 1103 194 133 106 43 chr15 67931839 67931886 -35563088 + L4 LINE RTE 1666 1715 -314 6 1103 522 31 0 0 chr15 67931893 67931957 -35563017 + (CA)n Simple_repeat Simple_repeat 2 65 0 6 1103 188 307 145 26 chr15 67932195 67932312 -35562662 + L2a LINE L2 3278 3408 -18 6 1103 5268 63 106 27 chr15 67935690 67936434 -35558540 + L1_Mus3 LINE L1 5827 6629 -9 6 1103 405 0 0 0 chr15 67936434 67936479 -35558495 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 1103 2288 163 17 29 chr15 67937558 67937969 -35557005 + MTB_Mm LTR MaLR 2 407 0 6 1103 4612 178 64 26 chr15 67937969 67938966 -35556008 + MTB_Mm-int LTR MaLR 1 1171 -87 6 1103 1192 155 43 5 chr15 67938977 67939184 -35555790 + MTB_Mm LTR MaLR 193 407 0 6 1103 231 276 132 66 chr15 67939815 67939951 -35555023 - L1MC5 LINE L1 -26 7935 7791 6 1103 403 274 37 61 chr15 67939967 67940130 -35554844 - RSINE1 SINE B4 0 165 7 6 1103 261 0 0 0 chr15 67940278 67940307 -35554667 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 1103 329 279 107 39 chr15 67940351 67940631 -35554343 - L1MC4a LINE L1 -1283 6599 6301 6 1103 493 320 0 82 chr15 67940994 67941188 -35553786 + MER20 DNA MER1_type 10 187 -32 6 1103 1643 118 75 20 chr15 67941188 67941482 -35553492 + L1_Mus4 LINE L1 6323 6632 -4 6 1103 3757 125 9 60 chr15 67943343 67943975 -35550999 + MT2B LTR ERVL 2 601 0 6 1103 1607 194 77 34 chr15 67944915 67945268 -35549706 + ORR1D2 LTR MaLR 3 370 0 6 1103 896 296 138 5 chr15 67946131 67946572 -35548402 + MLT1D LTR MaLR 5 504 -1 6 1103 284 244 25 13 chr15 67948145 67948224 -35546750 + ID4 SINE ID 1 80 -3 6 1103 765 206 14 7 chr15 67948944 67949091 -35545883 + B1_Mur4 SINE Alu 1 148 -2 6 1103 414 0 0 0 chr15 67949101 67949147 -35545827 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1103 298 129 16 16 chr15 67949147 67949210 -35545764 + GA-rich Low_complexity Low_complexity 2 64 0 6 1103 198 0 0 0 chr15 67949210 67949232 -35545742 + (CAGA)n Simple_repeat Simple_repeat 1 22 0 6 1103 1078 99 0 0 chr15 67949311 67949453 -35545521 - B1_Mus1 SINE Alu -5 143 2 6 1103 1099 270 37 29 chr15 67949682 67950056 -35544918 + Lx9 LINE L1 7121 7497 -147 6 1103 428 169 39 0 chr15 67950774 67950851 -35544123 - MTD LTR MaLR -1 418 339 6 1103 991 214 19 14 chr15 67950844 67951057 -35543917 - MTD LTR MaLR -200 219 6 6 1103 257 208 81 27 chr15 67952849 67952923 -35542051 - ID4 SINE ID -4 79 2 6 1103 24 32 0 0 chr15 67953218 67953249 -35541725 + AT_rich Low_complexity Low_complexity 1 31 0 6 1103 212 351 0 0 chr15 67953988 67954062 -35540912 - L2b LINE L2 -19 3356 3283 6 1103 262 339 103 6 chr15 67954425 67954600 -35540374 - MIR SINE MIR -27 235 44 6 1103 352 282 173 43 chr15 67956456 67956641 -35538333 - B4 SINE B4 0 292 84 6 1103 332 320 77 22 chr15 67956900 67957082 -35537892 + MER2 DNA MER2_type 147 338 -7 6 1103 261 0 0 0 chr15 67957171 67957200 -35537774 + (TTTCC)n Simple_repeat Simple_repeat 1 29 0 6 1103 543 78 0 0 chr15 67957875 67957952 -35537022 + (CA)n Simple_repeat Simple_repeat 2 78 0 6 1103 201 268 210 8 chr15 67958027 67958151 -35536823 + MIRb SINE MIR 97 245 -23 6 1103 672 165 87 0 chr15 67958996 67959123 -35535851 - B1_Mus1 SINE Alu 0 148 11 6 1103 294 29 0 0 chr15 67960367 67960402 -35534572 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1103 232 333 14 0 chr15 67961425 67961494 -35533480 + MIRc SINE MIR 35 104 -164 6 1103 820 250 24 5 chr15 67962809 67963018 -35531956 + ID_B1 SINE B4 8 220 -4 6 1103 277 287 80 44 chr15 67964712 67964825 -35530149 + MIRb SINE MIR 112 228 -34 6 1103 258 291 117 0 chr15 67967116 67967219 -35527755 - MER68 LTR ERVL -357 206 92 6 1103 241 300 98 42 chr15 67967631 67967989 -35526985 + L1MEg LINE L1 868 1245 -4839 6 1103 240 191 0 0 chr15 67969646 67969693 -35525281 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1103 372 288 71 0 chr15 67969750 67969920 -35525054 + L1MC3 LINE L1 7449 7630 -155 6 1103 362 294 82 22 chr15 67971038 67971222 -35523752 + B4A SINE B4 7 201 -91 6 1103 264 323 99 6 chr15 67971742 67971904 -35523070 - L1MC LINE L1 -2328 5554 5378 6 1103 1210 55 7 0 chr15 67971985 67972131 -35522843 + B1_Mm SINE Alu 1 147 0 6 1103 249 33 0 0 chr15 67972131 67972161 -35522813 + (CAAAAA)n Simple_repeat Simple_repeat 6 35 0 6 1103 1608 57 0 0 chr15 67972697 67972891 -35522083 - L1_Mus1 LINE L1 -351 6216 6023 6 1103 1438 40 0 6 chr15 67972891 67973066 -35521908 + L1_Mus1 LINE L1 6394 6567 0 6 1103 347 266 31 21 chr15 67973109 67973205 -35521769 + Lx8 LINE L1 6559 6655 -818 6 1103 233 213 65 26 chr15 67974824 67974901 -35520073 + ID SINE ID 6 85 -139 6 1103 542 305 108 8 chr15 67974985 67975203 -35519771 - ID_B1 SINE B4 -43 249 12 6 1103 821 276 75 39 chr15 67975300 67975579 -35519395 - B4A SINE B4 0 292 4 6 1103 250 260 101 47 chr15 67975611 67975740 -35519234 + MLT1D LTR MaLR 200 335 -170 6 1103 1079 173 79 28 chr15 67977464 67977678 -35517296 + URR1A DNA MER1_type 2 226 0 6 1103 460 223 17 11 chr15 67978471 67978589 -35516385 + GA-rich Low_complexity Low_complexity 1 120 0 6 1103 1060 83 0 43 chr15 67978589 67978777 -35516197 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 6 1103 460 223 17 11 chr15 67978777 67978835 -35516139 + polypurine Low_complexity Low_complexity 121 178 0 6 1103 1790 149 128 3 chr15 67979859 67980195 -35514779 - ORR1C1 LTR MaLR 0 378 1 6 1103 3382 185 50 22 chr15 67980195 67981028 -35513946 - ORR1C1-int LTR MaLR 0 1509 522 6 1103 537 313 12 40 chr15 67981408 67981581 -35513393 - B3A SINE B2 -17 181 14 6 1103 410 266 78 39 chr15 67981947 67982127 -35512847 + B3A SINE B2 5 191 -4 6 1103 350 275 96 30 chr15 67982150 67982285 -35512689 - Lx9 LINE L1 -1176 6468 6325 6 1103 3272 257 74 36 chr15 67982296 67982330 -35512644 + Lx9 LINE L1 6483 6512 -1132 6 1103 1350 172 187 22 chr15 67982330 67982651 -35512323 - ORR1C1 LTR MaLR 0 374 1 6 1103 3272 257 74 36 chr15 67982651 67983702 -35511272 + Lx9 LINE L1 6513 7609 -35 6 1103 3909 119 97 20 chr15 67985529 67986178 -35508796 - RMER6A LTR ERVK 0 756 62 6 1103 276 30 0 0 chr15 67986178 67986211 -35508763 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 1103 3909 119 97 20 chr15 67986211 67986263 -35508711 - RMER6A LTR ERVK -695 61 3 6 1103 441 0 0 0 chr15 67986474 67986523 -35508451 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 1103 475 335 124 24 chr15 67988914 67989333 -35505641 + MLT1D LTR MaLR 37 497 -8 6 1103 345 47 0 0 chr15 67989435 67989478 -35505496 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1103 257 355 40 0 chr15 67989617 67989741 -35505233 - Lx8 LINE L1 -331 7142 7014 6 1103 402 100 0 0 chr15 67989953 67990013 -35504961 + (A)n Simple_repeat Simple_repeat 1 60 0 6 1103 658 132 9 0 chr15 67992076 67992182 -35502792 + B1_Mus2 SINE Alu 39 145 -2 6 1103 324 120 0 0 chr15 67992198 67992248 -35502726 + (CGGGA)n Simple_repeat Simple_repeat 2 51 0 6 1103 247 287 156 41 chr15 67992468 67992686 -35502288 + Kanga1c DNA Tc2 6 248 -481 6 1103 267 255 159 37 chr15 67993642 67993805 -35501169 + MER58C DNA MER1_type 1 183 -32 6 1103 1156 44 0 0 chr15 67994565 67994700 -35500274 + B1_Mm SINE Alu 1 135 -12 6 1103 315 0 0 0 chr15 67994700 67994735 -35500239 + (CAAAA)n Simple_repeat Simple_repeat 4 38 0 6 1103 280 197 49 0 chr15 67996151 67996212 -35498762 - ID4_ SINE ID -18 65 2 6 1103 308 296 52 8 chr15 67999160 67999295 -35495679 + MIRb SINE MIR 1 147 -121 6 1103 420 326 121 73 chr15 68000551 68001129 -35493845 + L1MC5 LINE L1 7280 7885 -76 1 1103 465 296 26 13 chr15 68001879 68002033 -35492941 + HAL1-2a_MD LINE L1 2336 2491 -533 2 1103 314 257 0 121 chr15 68002428 68002552 -35492422 + Lx8 LINE L1 7118 7226 -247 3 1103 199 250 107 141 chr15 68004235 68004356 -35490618 - MIRb SINE MIR -137 131 15 4 1103 370 269 77 45 chr15 68004557 68004713 -35490261 - MIRc SINE MIR -64 204 44 5 1103 300 333 56 0 chr15 68005967 68006075 -35488899 + L1MB7 LINE L1 6071 6184 0 6 1103 478 237 16 63 chr15 68006611 68006800 -35488174 + Lx6 LINE L1 7254 7433 -27 7 1103 219 36 0 0 chr15 68006814 68006842 -35488132 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 8 1103 432 252 18 18 chr15 68006858 68006971 -35488003 + PB1D7 SINE Alu 1 113 -7 9 1103 538 243 85 45 chr15 68007622 68007799 -35487175 - RMER15 LTR ERVL 0 575 392 1 1103 222 318 0 0 chr15 68008896 68008962 -35486012 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 1103 1605 187 114 26 chr15 68008997 68009349 -35485625 + ORR1C2 LTR MaLR 1 383 -1 1 1103 278 250 29 154 chr15 68015218 68015322 -35479652 + B1F1 SINE Alu 3 93 -56 1 1103 556 175 96 10 chr15 68015405 68015509 -35479465 - B1_Mus1 SINE Alu -35 113 1 1 1103 222 37 0 0 chr15 68016284 68016311 -35478663 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1103 333 353 0 0 chr15 68016682 68016835 -35478139 + (TG)n Simple_repeat Simple_repeat 2 154 0 1 1103 203 343 10 0 chr15 68016886 68016988 -35477986 + (TG)n Simple_repeat Simple_repeat 1 103 0 1 1103 1880 207 39 44 chr15 68017544 68017743 -35477231 + MTD LTR MaLR 2 209 -210 1 1103 1260 34 7 0 chr15 68017743 68017889 -35477085 + B1_Mus1 SINE Alu 2 148 0 1 1103 1880 207 39 44 chr15 68017889 68018099 -35476875 + MTD LTR MaLR 210 409 -10 1 1103 274 362 51 26 chr15 68019740 68019896 -35475078 - Charlie8 DNA MER1_type -2248 180 21 1 1103 199 315 19 0 chr15 68021216 68021270 -35473704 + L3 LINE CR1 3813 3867 -622 2 1103 488 283 45 108 chr15 68021578 68021854 -35473120 - MTEa LTR MaLR -4 375 84 2 1103 326 295 29 0 chr15 68022652 68022757 -35472217 + L1MA4A LINE L1 5809 5916 -387 2 1103 324 0 0 0 chr15 68022759 68022795 -35472179 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 1103 366 185 0 0 chr15 68022878 68022959 -35472015 + (TG)n Simple_repeat Simple_repeat 1 81 0 2 1103 183 156 0 0 chr15 68023200 68023232 -35471742 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1103 347 321 66 57 chr15 68023538 68023766 -35471208 - RMER15 LTR ERVL -7 568 339 2 1103 589 329 120 17 chr15 68023983 68024274 -35470700 + ORR1E LTR MaLR 39 359 0 2 1103 823 141 211 32 chr15 68025799 68025989 -35468985 - URR1A DNA MER1_type 0 226 3 2 1104 306 50 0 0 chr15 68026669 68026709 -35468265 + (TCTG)n Simple_repeat Simple_repeat 4 43 0 2 1104 894 239 25 15 chr15 68026709 68026913 -35468061 - B3 SINE B2 -10 206 1 3 1104 383 250 74 43 chr15 68028506 68028644 -35466330 + Tigger7 DNA MER2_type 2279 2421 -70 3 1104 318 289 50 91 chr15 68028644 68028976 -35465998 + RMER17C LTR ERVK 1 376 -34 3 1104 428 378 48 0 chr15 68029547 68029735 -35465239 + LTR33 LTR ERVL 14 210 -305 3 1104 1860 185 52 8 chr15 68029777 68030143 -35464831 + RLTR14 LTR ERV1 1 382 0 3 1104 272 248 220 18 chr15 68031117 68031285 -35463689 + MTEb LTR MaLR 177 378 -1 3 1104 316 252 95 48 chr15 68032541 68032798 -35462176 + RMER10B LTR ERVL 18 287 -155 3 1104 2227 151 162 43 chr15 68034349 68034860 -35460114 + RMER15 LTR ERVL 4 575 0 3 1104 2976 146 50 0 chr15 68034923 68035418 -35459556 + RLTR28 LTR ERVL 2 521 -3 3 1104 341 306 9 0 chr15 68036693 68036820 -35458154 + L1MD2 LINE L1 5884 6014 -228 3 1104 28 48 0 0 chr15 68037064 68037106 -35457868 + AT_rich Low_complexity Low_complexity 1 42 0 4 1104 189 0 0 0 chr15 68037134 68037155 -35457819 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1104 1126 62 14 7 chr15 68037775 68037920 -35457054 + B1_Mus1 SINE Alu 1 146 -2 4 1104 502 248 0 122 chr15 68038109 68038165 -35456809 + B1_Mur1 SINE Alu 9 55 -94 4 1104 2127 54 0 0 chr15 68038165 68038426 -35456548 + L1Md_A LINE L1 6322 6582 0 4 1104 502 248 0 122 chr15 68038426 68038516 -35456458 + B1_Mur1 SINE Alu 56 137 -12 4 1104 4506 124 12 4 chr15 68038726 68039404 -35455570 + L1_Mur2 LINE L1 5142 5824 -53 4 1104 1540 310 77 23 chr15 68039392 68040085 -35454889 + Lx9 LINE L1 6788 7517 -127 4 1104 255 31 0 0 chr15 68040085 68040117 -35454857 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1104 225 234 0 47 chr15 68040189 68040274 -35454700 + Lx8 LINE L1 7393 7473 0 4 1104 616 267 42 47 chr15 68040278 68040457 -35454517 + B3 SINE B2 6 179 -37 4 1104 252 0 0 0 chr15 68040457 68040485 -35454489 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1104 616 267 42 47 chr15 68040485 68040517 -35454457 + B3 SINE B2 180 215 -1 4 1104 513 273 25 80 chr15 68040715 68040914 -35454060 + B4 SINE B4 2 189 -103 5 1104 1177 215 162 145 chr15 68040914 68041377 -35453597 + MT2B LTR ERVL 1 555 -46 5 1104 273 29 0 0 chr15 68041473 68041507 -35453467 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1104 217 364 20 20 chr15 68042817 68042918 -35452056 - MIRb SINE MIR -45 223 123 5 1104 305 271 30 0 chr15 68043724 68043890 -35451084 + CT-rich Low_complexity Low_complexity 4 174 0 5 1104 267 339 0 33 chr15 68043967 68044150 -35450824 + (CCCA)n Simple_repeat Simple_repeat 1 177 0 5 1104 715 275 48 29 chr15 68047635 68047845 -35447129 + RMER15 LTR ERVL 348 561 -14 5 1104 261 182 0 0 chr15 68047880 68047935 -35447039 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1104 252 0 0 0 chr15 68048506 68048534 -35446440 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1104 24 0 0 0 chr15 68048616 68048640 -35446334 + AT_rich Low_complexity Low_complexity 1 24 0 6 1104 607 235 81 0 chr15 68049160 68049296 -35445678 + B1_Mur4 SINE Alu 4 150 0 6 1104 935 239 9 41 chr15 68049927 68050145 -35444829 + B3 SINE B2 6 216 0 6 1104 261 306 0 66 chr15 68050197 68050288 -35444686 - MIRb SINE MIR -125 143 59 6 1104 2058 161 79 36 chr15 68050396 68050816 -35444158 + RMER10A LTR ERVL 5 442 0 6 1104 798 67 0 0 chr15 68050845 68050950 -35444024 + (TTCC)n Simple_repeat Simple_repeat 3 107 0 6 1104 471 35 0 0 chr15 68051461 68051518 -35443456 + (CA)n Simple_repeat Simple_repeat 1 57 0 6 1104 795 285 21 60 chr15 68052217 68052452 -35442522 + MER44B DNA MER2_type 184 409 -141 6 1104 413 275 33 16 chr15 68052463 68052585 -35442389 + B4A SINE B4 125 248 -44 6 1104 425 84 14 0 chr15 68052599 68052670 -35442304 + (CA)n Simple_repeat Simple_repeat 2 73 0 6 1104 1284 264 59 43 chr15 68052674 68053252 -35441722 + L1MB5 LINE L1 5591 6180 0 7 1104 331 358 70 33 chr15 68053585 68053799 -35441175 - L1M5 LINE L1 -502 5622 5401 7 1104 205 182 0 0 chr15 68053927 68053960 -35441014 - L2b LINE L2 -26 3349 3317 7 1104 250 378 50 20 chr15 68055736 68055921 -35439053 - MIRb SINE MIR -75 201 5 7 1104 726 174 0 33 chr15 68055924 68056108 -35438866 + (CATA)n Simple_repeat Simple_repeat 1 178 0 7 1104 570 54 0 0 chr15 68056978 68057052 -35437922 + (TTTA)n Simple_repeat Simple_repeat 3 76 0 7 1104 1467 185 217 15 chr15 68057053 68057465 -35437509 - Lx5 LINE L1 -15 7043 6549 7 1104 4419 164 72 50 chr15 68057459 68058368 -35436606 + Lx4B LINE L1 5376 6311 -747 7 1104 1595 52 0 19 chr15 68058368 68058583 -35436391 - L1Md_F3 LINE L1 0 6584 6374 7 1104 4419 161 95 46 chr15 68058583 68058805 -35436169 + Lx4B LINE L1 6312 6549 -509 7 1104 398 319 90 0 chr15 68059702 68059890 -35435084 + L2 LINE L2 1676 1880 -1539 7 1104 668 227 318 4 chr15 68060377 68060646 -35434328 - MTE2b LTR MaLR 0 370 18 8 1104 636 151 19 93 chr15 68061466 68061627 -35433347 + Lx3B LINE L1 6821 6969 -4 8 1104 425 354 113 28 chr15 68063751 68063998 -35430976 + L1MDa LINE L1 29 296 -6337 8 1104 343 308 88 50 chr15 68064534 68064715 -35430259 + L1MDa LINE L1 974 1161 -5472 8 1104 239 142 89 20 chr15 68064724 68064791 -35430183 - B3 SINE B2 -113 103 23 8 1104 315 266 88 54 chr15 68064793 68064940 -35430034 + L1MDa LINE L1 1180 1331 -5209 8 1104 589 258 116 58 chr15 68065050 68065428 -35429546 + L1MDa LINE L1 1464 1863 -4770 8 1104 831 255 16 5 chr15 68066150 68066170 -35428804 - B3 SINE B2 -25 191 172 8 1104 412 40 53 13 chr15 68066170 68066246 -35428728 + (TA)n Simple_repeat Simple_repeat 2 80 0 8 1104 831 255 16 5 chr15 68066246 68066414 -35428560 - B3 SINE B2 -45 171 2 8 1104 464 267 19 57 chr15 68066508 68066667 -35428307 + HAL1-2a_MD LINE L1 2340 2492 -532 8 1104 264 222 0 0 chr15 68066706 68066778 -35428196 + (CACCAT)n Simple_repeat Simple_repeat 4 75 0 8 1104 238 232 13 78 chr15 68067083 68067170 -35427804 - B1F2 SINE Alu -28 121 40 8 1104 421 239 33 10 chr15 68067666 68067831 -35427143 - L1_Mm LINE L1 -821 5479 5336 8 1104 670 316 30 90 chr15 68068579 68068636 -35426338 + B4A SINE B4 35 95 -197 9 1104 1869 5 0 0 chr15 68068636 68068845 -35426129 + L1Md_A LINE L1 6374 6582 0 9 1104 670 316 30 90 chr15 68068845 68069007 -35425967 + B4A SINE B4 96 246 -46 9 1104 1223 126 21 0 chr15 68069007 68069197 -35425777 + B2_Mm2 SINE B2 2 195 0 9 1104 670 316 30 90 chr15 68069197 68069244 -35425730 + B4A SINE B4 247 286 -6 9 1104 437 216 18 18 chr15 68069284 68069454 -35425520 + (CATA)n Simple_repeat Simple_repeat 1 170 0 9 1104 231 293 0 0 chr15 68069426 68069549 -35425425 + (CA)n Simple_repeat Simple_repeat 1 123 0 9 1104 222 150 0 0 chr15 68070315 68070355 -35424619 + (CACCAT)n Simple_repeat Simple_repeat 5 44 0 9 1104 212 245 0 0 chr15 68070377 68070426 -35424548 + (CACCAT)n Simple_repeat Simple_repeat 1 49 0 9 1104 198 364 27 0 chr15 68070426 68070536 -35424438 - MIRc SINE MIR -111 157 45 9 1104 1923 128 103 17 chr15 68071321 68071670 -35423304 + ORR1C2 LTR MaLR 1 379 -5 9 1104 247 275 21 21 chr15 68072948 68073041 -35421933 + (CATA)n Simple_repeat Simple_repeat 2 94 0 9 1104 397 304 126 38 chr15 68073908 68074147 -35420827 - MER33 DNA MER1_type -9 315 56 9 1104 21 0 0 0 chr15 68075075 68075096 -35419878 + AT_rich Low_complexity Low_complexity 1 21 0 1 1104 1408 139 4 26 chr15 68079261 68079490 -35415484 + URR1B DNA MER1_type 2 225 0 1 1104 316 241 102 57 chr15 68079641 68079729 -35415245 - MTD-int LTR MaLR -342 916 831 1 1104 388 256 159 0 chr15 68079754 68079930 -35415044 - L1MB3 LINE L1 -12 6171 5968 1 1104 256 307 125 0 chr15 68079930 68080018 -35414956 + MER2 DNA MER2_type 43 141 -204 1 1104 1143 207 159 54 chr15 68080035 68080414 -35414560 - MTD LTR MaLR -18 401 2 1 1104 626 274 75 20 chr15 68080414 68080610 -35414364 + MER2B DNA MER2_type 129 335 -1 1 1104 453 184 26 0 chr15 68081474 68081550 -35413424 + ORR1E LTR MaLR 7 84 -275 1 1104 228 220 136 0 chr15 68081722 68081781 -35413193 + MTEb LTR MaLR 294 360 -19 1 1104 725 293 75 7 chr15 68082259 68082519 -35412455 + MTEa LTR MaLR 18 289 -90 1 1104 405 266 34 51 chr15 68082519 68082697 -35412277 + L1ME2 LINE L1 5555 5729 -715 1 1104 461 289 20 47 chr15 68082700 68082725 -35412249 + ID_B1 SINE B4 78 222 -2 1 1104 686 202 16 0 chr15 68082725 68082849 -35412125 + B1_Mur1 SINE Alu 23 148 -1 1 1104 4183 191 96 59 chr15 68083209 68084159 -35410815 + RMER1A Other Other 46 1030 0 1 1104 416 350 95 83 chr15 68084167 68084356 -35410618 + L1ME2 LINE L1 5715 5900 -264 1 1104 3263 51 2 8 chr15 68084356 68084754 -35410220 + MTA_Mm LTR MaLR 1 396 0 1 1104 416 350 95 83 chr15 68084754 68084891 -35410083 + L1ME2 LINE L1 5901 6045 -119 1 1104 634 252 6 44 chr15 68085154 68085312 -35409662 + RMER5 LTR ERV1 1 152 -382 1 1104 465 150 0 0 chr15 68085321 68085421 -35409553 + (CA)n Simple_repeat Simple_repeat 2 101 0 1 1104 1925 203 22 3 chr15 68085422 68085787 -35409187 + RMER5 LTR ERV1 163 534 0 1 1104 224 59 29 0 chr15 68085965 68085999 -35408975 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1 1104 5399 119 27 27 chr15 68086279 68087166 -35407808 - RMER17D LTR ERVK -2 887 1 1 1104 333 265 39 0 chr15 68087386 68087488 -35407486 + L1MA7 LINE L1 5662 5767 -524 1 1104 367 253 97 32 chr15 68087643 68087810 -35407164 + L1MA7 LINE L1 6055 6230 -61 1 1104 741 99 72 0 chr15 68087971 68088082 -35406892 - B2_Mm2 SINE B2 0 195 77 1 1104 27 49 0 0 chr15 68090169 68090210 -35404764 + GC_rich Low_complexity Low_complexity 1 41 0 1 1104 270 0 0 0 chr15 68090811 68090841 -35404133 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1104 1062 263 63 8 chr15 68092374 68092642 -35402332 - B4A SINE B4 -8 284 2 1 1104 667 218 87 12 chr15 68093763 68093935 -35401039 + RMER20B LTR ERVK 228 412 -215 1 1104 392 331 15 15 chr15 68094068 68094203 -35400771 - B4A SINE B4 -147 145 11 1 1104 1922 113 23 104 chr15 68094219 68094603 -35400371 + RLTR15 LTR ERVK 1 353 -6 1 1104 396 0 0 0 chr15 68094699 68094743 -35400231 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 1104 470 262 46 9 chr15 68095505 68095613 -35399361 - RSINE1 SINE B4 -36 129 18 1 1104 1818 128 3 133 chr15 68096170 68096288 -35398686 + ORR1A4 LTR MaLR 1 95 -234 1 1104 4207 168 74 77 chr15 68096288 68097192 -35397782 + RMER19B LTR ERVK 2 902 0 1 1104 1818 128 3 133 chr15 68097192 68097442 -35397532 + ORR1A4 LTR MaLR 96 321 -8 1 1104 2032 164 84 16 chr15 68101184 68101567 -35393407 - MTC LTR MaLR 0 421 13 1 1104 642 152 118 29 chr15 68101571 68101741 -35393233 - MTC-int LTR MaLR -1 1257 1073 1 1104 443 336 67 51 chr15 68102062 68102316 -35392658 + MLT1B LTR MaLR 131 388 -2 1 1104 310 343 68 64 chr15 68103861 68104274 -35390700 - L2c LINE L2 0 3375 2986 1 1104 207 125 0 0 chr15 68104423 68104463 -35390511 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1 1104 439 290 50 23 chr15 68104588 68104746 -35390228 - MER58A DNA MER1_type -17 207 56 1 1104 697 279 31 25 chr15 68104865 68105027 -35389947 + B3 SINE B2 20 182 -34 1 1104 633 267 34 7 chr15 68105494 68105641 -35389333 + RSINE1 SINE B4 10 160 -5 1 1104 208 308 50 25 chr15 68107745 68107825 -35387149 - MIR3 SINE MIR -16 192 111 1 1104 222 333 41 10 chr15 68107991 68108088 -35386886 + L3 LINE CR1 4284 4383 -106 1 1104 361 307 107 16 chr15 68108130 68108448 -35386526 + L1M5 LINE L1 5463 5809 -353 1 1104 419 329 72 36 chr15 68108452 68108619 -35386355 - MER58A DNA MER1_type -10 214 42 1 1104 478 307 42 28 chr15 68108718 68108877 -35386097 + B1F SINE Alu 1 149 0 1 1104 17759 136 51 26 chr15 68108881 68115321 -35379653 + Lx3_Mus LINE L1 34 7001 -8 1 1104 180 0 0 0 chr15 68115549 68115569 -35379405 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 1104 2757 70 5 3 chr15 68115602 68115972 -35379002 - L1_Mus3 LINE L1 -3 6635 6265 1 1104 217 336 52 52 chr15 68115982 68116117 -35378857 - MIRb SINE MIR -112 156 22 1 1104 236 186 17 0 chr15 68116424 68116483 -35378491 + CT-rich Low_complexity Low_complexity 1 60 0 1 1104 452 17 33 0 chr15 68116527 68116587 -35378387 + (TATG)n Simple_repeat Simple_repeat 2 63 0 1 1104 291 140 0 0 chr15 68116649 68116699 -35378275 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 1104 264 358 11 0 chr15 68116704 68116799 -35378175 - Lx9 LINE L1 -247 7226 7131 1 1104 2738 174 114 20 chr15 68116918 68117041 -35377933 - RMER1B Other Other 0 1066 920 1 1104 252 86 0 0 chr15 68117041 68117076 -35377898 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1104 2738 174 114 20 chr15 68117076 68117539 -35377435 - RMER1B Other Other -147 919 426 1 1104 482 282 102 76 chr15 68117550 68117853 -35377121 - RLTR23 LTR ERV1 -21 409 99 1 1104 463 233 228 20 chr15 68117982 68118067 -35376907 - RMER1A Other Other -673 357 245 1 1104 216 0 0 0 chr15 68118067 68118091 -35376883 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 1104 463 233 228 20 chr15 68118091 68118154 -35376820 - RMER1A Other Other -786 244 178 1 1104 451 262 123 79 chr15 68118140 68118460 -35376514 - Lx9 LINE L1 -513 7131 6876 1 1104 417 39 0 0 chr15 68119605 68119656 -35375318 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1104 270 0 0 0 chr15 68120454 68120484 -35374490 + (CATA)n Simple_repeat Simple_repeat 2 31 0 1 1104 315 0 0 0 chr15 68120484 68120518 -35374456 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1104 267 322 123 95 chr15 68120520 68120805 -35374169 + ORR1D2 LTR MaLR 78 370 0 1 1104 377 368 114 23 chr15 68120935 68121285 -35373689 + LTR16C LTR ERVL 73 454 -35 1 1104 286 249 253 30 chr15 68121328 68121494 -35373480 - RMER5 LTR ERV1 -327 207 5 1 1104 2580 270 85 30 chr15 68121494 68122509 -35372465 - Lx8 LINE L1 -12 7461 6391 1 1104 23 0 0 0 chr15 68122517 68122540 -35372434 + AT_rich Low_complexity Low_complexity 1 23 0 1 1104 403 339 64 6 chr15 68122650 68122822 -35372152 - L3 LINE CR1 -519 3970 3789 1 1104 653 231 42 0 chr15 68123000 68123143 -35371831 - MTD LTR MaLR -122 297 149 1 1104 655 233 73 0 chr15 68123287 68123437 -35371537 + RSINE1 SINE B4 3 163 -2 1 1104 856 235 22 74 chr15 68123622 68123852 -35371122 - MTD LTR MaLR -8 411 194 1 1104 2631 225 65 34 chr15 68123896 68124573 -35370401 - RMER1B Other Other -2 1064 367 1 1104 2085 199 46 2 chr15 68124613 68125007 -35369967 - MTD LTR MaLR -8 411 1 1 1104 722 272 76 5 chr15 68125030 68125215 -35369759 - B3 SINE B2 -17 199 2 1 1104 282 262 154 0 chr15 68125774 68125923 -35369051 - L1ME3B LINE L1 -161 6079 5908 1 1104 526 325 58 38 chr15 68126192 68126627 -35368347 - L1ME3B LINE L1 -621 5552 5106 1 1104 587 290 98 5 chr15 68126699 68126914 -35368060 - MLT1A0 LTR MaLR 0 365 131 1 1104 2942 144 42 105 chr15 68126944 68127025 -35367949 + RMER15 LTR ERVL 2 75 -500 1 1104 306 0 0 0 chr15 68127025 68127059 -35367915 + (CAA)n Simple_repeat Simple_repeat 2 35 0 1 1104 2942 144 42 105 chr15 68127059 68127589 -35367385 + RMER15 LTR ERVL 76 575 0 1 1104 464 331 88 35 chr15 68127836 68128177 -35366797 - L1ME3B LINE L1 -1480 4666 4308 1 1104 2375 228 5 42 chr15 68128405 68128426 -35366548 + Lx9 LINE L1 6742 6762 -882 1 1104 975 230 155 126 chr15 68128426 68128943 -35366031 - MT2A LTR ERVL 0 533 2 1 1104 2375 228 5 42 chr15 68128943 68129512 -35365462 + Lx9 LINE L1 6763 7310 -334 1 1104 387 0 0 0 chr15 68129522 68129565 -35365409 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1104 372 162 98 29 chr15 68129574 68129676 -35365298 + Lx9 LINE L1 7536 7644 0 1 1104 334 317 115 11 chr15 68129810 68129992 -35364982 - L1ME3B LINE L1 -2114 4032 3832 1 1104 747 196 140 9 chr15 68131027 68131249 -35363725 + Lx5 LINE L1 6787 7037 -13 1 1104 1147 34 0 13 chr15 68131249 68131399 -35363575 + (TAGA)n Simple_repeat Simple_repeat 4 151 0 1 1104 290 308 93 0 chr15 68131876 68131983 -35362991 + PB1D10 SINE Alu 1 117 0 1 1104 284 260 26 0 chr15 68132136 68132213 -35362761 - ID4 SINE ID -2 81 3 1 1104 220 291 198 55 chr15 68132810 68132992 -35361982 + L2 LINE L2 2704 2911 -508 1 1104 2696 157 19 48 chr15 68133468 68134009 -35360965 - RLTR24 LTR ERV1 0 529 5 1 1104 506 297 51 51 chr15 68134521 68134716 -35360258 + B3A SINE B2 2 196 -2 1 1104 2847 143 25 80 chr15 68135840 68136388 -35358586 - RMER19B LTR ERVK 0 902 385 1 1104 7525 77 15 3 chr15 68136393 68137404 -35357570 + RLTR13D5 LTR ERVK 1 1023 0 1 1104 366 85 0 0 chr15 68137438 68137497 -35357477 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1104 1621 164 16 143 chr15 68137498 68137862 -35357112 - RMER19B LTR ERVK -584 318 1 1 1104 316 55 36 0 chr15 68138011 68138066 -35356908 + (TTTG)n Simple_repeat Simple_repeat 2 58 0 1 1104 905 52 0 0 chr15 68138072 68138187 -35356787 - B1_Mus1 SINE Alu -12 136 22 1 1104 23 33 0 0 chr15 68138808 68138838 -35356136 + AT_rich Low_complexity Low_complexity 1 30 0 1 1104 258 311 124 16 chr15 68139089 68139210 -35355764 - MLT1A1 LTR MaLR -274 134 1 1 1104 590 301 76 18 chr15 68139257 68139480 -35355494 + MER63B DNA AcHobo 198 433 -3 1 1104 239 361 49 0 chr15 68139491 68139613 -35355361 - MIR SINE MIR -114 148 21 1 1104 279 0 0 0 chr15 68139703 68139734 -35355240 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1104 240 35 0 0 chr15 68139734 68139763 -35355211 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1104 1029 167 99 33 chr15 68140091 68140302 -35354672 - URR1B DNA MER1_type 0 225 1 1 1104 226 111 0 27 chr15 68140546 68140583 -35354391 + 4.5SRNA scRNA scRNA 51 86 -8 1 1104 681 13 0 0 chr15 68140551 68140630 -35354344 + B1_Mm SINE Alu 58 136 -11 1 1104 277 271 312 7 chr15 68140892 68141033 -35353941 - MIR SINE MIR -65 197 14 1 1104 207 0 0 0 chr15 68141892 68141915 -35353059 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1104 249 230 166 20 chr15 68142054 68142205 -35352769 + Lx7 LINE L1 7524 7696 0 1 1104 27 29 0 0 chr15 68142230 68142264 -35352710 + AT_rich Low_complexity Low_complexity 1 34 0 2 1104 2345 151 20 12 chr15 68142590 68143053 -35351921 - Lx5 LINE L1 -1042 6008 5534 2 1104 1161 134 11 5 chr15 68143053 68143241 -35351733 - B2_Mm1t SINE B2 -4 189 1 2 1104 2030 171 42 65 chr15 68143241 68143328 -35351646 - Lx5 LINE L1 -344 5533 5456 2 1104 998 246 4 0 chr15 68143643 68143899 -35351075 + L1VL4 LINE L1 533 789 -5513 2 1104 12057 162 40 45 chr15 68143891 68143947 -35351027 + Lx2B LINE L1 1203 1258 -4619 2 1104 531 0 0 0 chr15 68143947 68144006 -35350968 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 1104 12057 162 40 45 chr15 68144006 68146723 -35348251 + Lx2B LINE L1 1259 3961 -1916 2 1104 5159 161 10 8 chr15 68146719 68148040 -35346934 + Lx2B LINE L1 5305 6629 -371 2 1104 39 22 0 0 chr15 68148040 68148086 -35346888 + AT_rich Low_complexity Low_complexity 1 46 0 2 1104 267 291 90 53 chr15 68149276 68149427 -35345547 + MIR SINE MIR 28 186 -82 2 1104 275 335 210 0 chr15 68149668 68149868 -35345106 + MIRb SINE MIR 24 265 -3 2 1104 1151 82 0 0 chr15 68150295 68150441 -35344533 + B1_Mus1 SINE Alu 1 146 -2 2 1104 1074 97 7 0 chr15 68150762 68150907 -35344067 - B1_Mus1 SINE Alu 0 148 3 2 1104 602 95 11 0 chr15 68150994 68151089 -35343885 + (TCCA)n Simple_repeat Simple_repeat 2 97 0 2 1104 3385 64 102 0 chr15 68151365 68151816 -35343158 + L1_Mus1 LINE L1 6071 6567 0 2 1104 514 234 0 0 chr15 68153025 68153136 -35341838 - PB1D9 SINE Alu -7 113 3 2 1104 941 65 89 0 chr15 68153951 68154075 -35340899 + B1_Mm SINE Alu 1 135 -12 2 1104 306 0 0 0 chr15 68154075 68154109 -35340865 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2 1104 189 0 0 0 chr15 68154109 68154130 -35340844 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2 1104 266 0 0 29 chr15 68154130 68154165 -35340809 + (CAAAC)n Simple_repeat Simple_repeat 1 34 0 2 1104 387 0 0 0 chr15 68154276 68154319 -35340655 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1104 5063 221 98 8 chr15 68154528 68155858 -35339116 - Lx6 LINE L1 -78 7382 5934 2 1104 320 331 23 87 chr15 68156163 68156335 -35338639 - RSINE1 SINE B4 -2 163 3 2 1104 966 212 88 32 chr15 68156457 68156776 -35338198 - ORR1E LTR MaLR -8 371 19 2 1104 296 258 61 0 chr15 68156743 68156809 -35338165 - MER58C DNA MER1_type -10 205 136 2 1105 1164 75 0 0 chr15 68157739 68157886 -35337088 + B1_Mus2 SINE Alu 1 147 0 2 1105 303 93 0 0 chr15 68157887 68157930 -35337044 + (A)n Simple_repeat Simple_repeat 1 43 0 2 1105 919 187 38 62 chr15 68158840 68159051 -35335923 + B3 SINE B2 1 206 -10 2 1105 212 222 0 0 chr15 68159051 68159087 -35335887 + polypurine Low_complexity Low_complexity 4 39 0 2 1105 756 255 0 98 chr15 68160276 68160550 -35334424 + L1VL1 LINE L1 29 275 -6147 2 1105 9515 75 14 1 chr15 68160552 68162588 -35332386 + L1_Mus2 LINE L1 4504 6565 -1 2 1105 281 359 91 32 chr15 68162592 68162779 -35332195 - MIRb SINE MIR -15 253 56 2 1105 1696 314 106 33 chr15 68162835 68163568 -35331406 + MER21B LTR ERV1 20 806 -57 2 1105 1183 152 36 14 chr15 68164216 68164436 -35330538 - URR1A DNA MER1_type -1 225 1 2 1105 943 54 15 8 chr15 68165566 68165696 -35329278 + B1_Mus1 SINE Alu 18 148 0 2 1105 510 161 0 0 chr15 68165858 68165951 -35329023 + (TA)n Simple_repeat Simple_repeat 1 93 0 2 1105 8121 103 39 19 chr15 68166324 68168516 -35326458 - Lx3C LINE L1 -2 6974 4748 2 1105 351 78 0 0 chr15 68169251 68169302 -35325672 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 1105 261 0 0 0 chr15 68169302 68169331 -35325643 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1105 419 281 60 38 chr15 68170039 68170172 -35324802 + MER5A DNA MER1_type 49 184 -5 2 1105 321 257 0 14 chr15 68171502 68171573 -35323401 + ID4 SINE ID 5 74 -9 2 1105 406 234 87 16 chr15 68171819 68171945 -35323029 + B1_Mur1 SINE Alu 2 136 -13 2 1105 291 54 0 0 chr15 68171945 68171982 -35322992 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 2 1105 1624 264 78 21 chr15 68173881 68174410 -35320564 - Lx8 LINE L1 -613 6860 6302 2 1105 1460 54 21 0 chr15 68174713 68174899 -35320075 - B2_Mm2 SINE B2 -4 191 2 2 1105 252 0 0 0 chr15 68175321 68175349 -35319625 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1105 310 296 137 7 chr15 68175950 68176103 -35318871 + MIR SINE MIR 78 250 -12 2 1105 431 248 64 9 chr15 68177395 68177505 -35317469 + PB1D10 SINE Alu 1 116 -1 2 1105 1245 132 24 24 chr15 68178539 68178748 -35316226 - URR1A DNA MER1_type -1 225 17 2 1105 222 309 0 0 chr15 68179150 68179247 -35315727 + T-rich Low_complexity Low_complexity 1 97 0 2 1105 270 321 14 48 chr15 68180249 68180396 -35314578 + L1M4 LINE L1 4472 4613 -1533 2 1105 510 286 63 21 chr15 68180398 68180541 -35314433 - B1F SINE Alu 0 149 1 2 1105 438 288 119 66 chr15 68180567 68181038 -35313936 + L1M4 LINE L1 4622 5147 -999 2 1105 505 309 31 17 chr15 68181082 68181283 -35313691 + B3A SINE B2 8 205 -11 2 1105 370 328 138 16 chr15 68181301 68181490 -35313484 + L1M4 LINE L1 5190 5401 -745 2 1105 626 279 153 18 chr15 68181495 68182010 -35312964 + L1ME1 LINE L1 5597 6334 0 2 1105 538 302 7 14 chr15 68182029 68182170 -35312804 + B1F SINE Alu 9 148 -1 2 1105 987 214 170 25 chr15 68182452 68182769 -35312205 - ORR1D2 LTR MaLR 0 370 8 2 1105 490 248 5 148 chr15 68183158 68183177 -35311797 + ID_B1 SINE B4 81 147 -77 2 1105 755 189 0 62 chr15 68183177 68183307 -35311667 + B1_Mur1 SINE Alu 9 130 -19 2 1105 490 248 5 148 chr15 68183307 68183323 -35311651 + ID_B1 SINE B4 148 213 -11 2 1105 878 226 14 28 chr15 68183699 68183917 -35311057 + B3 SINE B2 2 216 0 2 1105 986 302 121 27 chr15 68184809 68185329 -35309645 + L3 LINE CR1 3718 4286 -203 2 1105 1154 41 0 14 chr15 68185781 68185929 -35309045 + B2_Mm2 SINE B2 1 146 -49 2 1105 225 94 0 0 chr15 68185930 68185962 -35309012 + (CATATA)n Simple_repeat Simple_repeat 4 35 0 2 1105 393 256 49 8 chr15 68186611 68186733 -35308241 + Lx7 LINE L1 7188 7314 -382 2 1105 841 276 70 148 chr15 68187178 68187311 -35307663 - MER44B DNA MER2_type -12 538 430 2 1105 1192 28 21 0 chr15 68187311 68187454 -35307520 - B1_Mm SINE Alu 0 147 2 2 1105 841 276 70 148 chr15 68187454 68187881 -35307093 - MER44B DNA MER2_type -121 429 22 2 1105 556 284 138 9 chr15 68187914 68188124 -35306850 - MIR SINE MIR -16 246 10 2 1105 1228 94 44 0 chr15 68188972 68189153 -35305821 + B2_Mm2 SINE B2 2 190 -5 2 1105 30 69 0 0 chr15 68189630 68189688 -35305286 + AT_rich Low_complexity Low_complexity 1 58 0 2 1105 1186 68 0 0 chr15 68189691 68189838 -35305136 + B1_Mm SINE Alu 1 147 0 2 1105 1135 81 0 0 chr15 68191447 68191595 -35303379 - B1_Mus1 SINE Alu 0 148 1 2 1105 189 0 0 0 chr15 68193539 68193560 -35301414 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2 1105 208 208 65 24 chr15 68194304 68194427 -35300547 + (CCGCG)n Simple_repeat Simple_repeat 4 131 0 2 1105 252 113 31 31 chr15 68194486 68194550 -35300424 + (CCCG)n Simple_repeat Simple_repeat 4 67 0 2 1105 28 91 0 0 chr15 68194554 68194631 -35300343 + GC_rich Low_complexity Low_complexity 1 77 0 2 1105 222 304 0 0 chr15 68194750 68194806 -35300168 + (CG)n Simple_repeat Simple_repeat 1 56 0 2 1105 476 129 11 45 chr15 68195522 68195611 -35299363 - B1_Mur2 SINE Alu -3 146 61 2 1105 1127 216 96 48 chr15 68197372 68197868 -35297106 - RMER4B LTR ERVK -14 571 17 2 1105 491 254 118 21 chr15 68198496 68198803 -35296171 + MTD LTR MaLR 34 419 0 2 1105 593 232 9 0 chr15 68199316 68199428 -35295546 + PB1D9 SINE Alu 2 114 -6 2 1105 761 183 19 50 chr15 68199562 68199723 -35295251 + RMER16 LTR ERVK 1 156 -377 2 1105 33928 45 0 3 chr15 68199723 68205197 -35289777 + L1Md_T LINE L1 39 5589 -297 2 1105 8507 31 0 0 chr15 68205197 68206193 -35288781 + L1Md_T LINE L1 5590 6585 0 2 1105 22 0 0 0 chr15 68206193 68206215 -35288759 + AT_rich Low_complexity Low_complexity 1 22 0 2 1105 1057 168 16 5 chr15 68206313 68206499 -35288475 + RMER16 LTR ERVK 346 533 0 2 1105 1098 79 0 0 chr15 68206571 68206711 -35288263 + B1_Mus1 SINE Alu 2 141 -7 2 1105 284 0 0 27 chr15 68206711 68206748 -35288226 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2 1105 305 348 48 24 chr15 68209015 68209180 -35285794 - MIRb SINE MIR -21 247 79 2 1105 250 191 0 0 chr15 68209879 68209921 -35285053 + MER63D DNA AcHobo 1020 1061 0 2 1105 309 305 131 38 chr15 68210448 68210608 -35284366 + MLT1I LTR MaLR 170 344 -67 2 1105 584 369 65 30 chr15 68210697 68210957 -35284017 + MLT1I-int LTR MaLR 42 307 -1080 2 1105 4814 153 64 14 chr15 68210957 68211822 -35283152 + RMER13B LTR ERVK 1 908 0 2 1105 584 369 65 30 chr15 68211822 68211961 -35283013 + MLT1I-int LTR MaLR 308 455 -932 2 1105 475 264 122 24 chr15 68212460 68212639 -35282335 + ORR1E LTR MaLR 3 187 -187 2 1105 666 171 0 0 chr15 68212639 68212762 -35282212 + CT-rich Low_complexity Low_complexity 4 126 0 2 1105 1213 107 43 5 chr15 68212762 68212950 -35282024 - B2_Mm2 SINE B2 0 195 1 2 1105 491 179 21 0 chr15 68215244 68215339 -35279635 + MTC LTR MaLR 7 103 -318 2 1105 2125 178 58 42 chr15 68215339 68215821 -35279153 + Lx5 LINE L1 6560 7049 -1 2 1105 1644 183 117 15 chr15 68215881 68216214 -35278760 + MTC LTR MaLR 1 367 -54 2 1105 1393 168 115 7 chr15 68216226 68216513 -35278461 + MTC LTR MaLR 104 421 0 2 1105 356 315 130 0 chr15 68217015 68217161 -35277813 - L3 LINE CR1 -765 3724 3560 2 1105 580 291 85 33 chr15 68217459 68217729 -35277245 - MLT1J LTR MaLR -161 351 68 2 1105 226 234 98 78 chr15 68218428 68218530 -35276444 + MIR SINE MIR 18 121 -87 2 1105 405 231 45 21 chr15 68218604 68218726 -35276248 + B4A SINE B4 1 132 -33 2 1105 3655 89 0 2 chr15 68221735 68222229 -35272745 - L1Md_F2 LINE L1 0 6582 6090 2 1105 1142 55 7 7 chr15 68222367 68222514 -35272460 - B1_Mus1 SINE Alu 0 148 2 2 1105 26 0 0 0 chr15 68222715 68222741 -35272233 + AT_rich Low_complexity Low_complexity 1 26 0 2 1105 554 239 32 27 chr15 68222816 68223001 -35271973 + Lx9 LINE L1 7331 7516 -128 2 1105 384 22 0 0 chr15 68224096 68224141 -35270833 + (TATG)n Simple_repeat Simple_repeat 2 46 0 3 1105 603 301 12 12 chr15 68224141 68224306 -35270668 - B3 SINE B2 -51 165 1 3 1105 522 0 0 0 chr15 68225032 68225090 -35269884 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 3 1105 4635 133 18 109 chr15 68227382 68228374 -35266600 - RLTR13D6 LTR ERVK 0 902 1 3 1105 212 351 52 22 chr15 68229170 68229304 -35265670 - MIRb SINE MIR -109 159 22 3 1105 1243 116 15 45 chr15 68230289 68230488 -35264486 + B2_Mm2 SINE B2 2 194 -1 3 1105 434 124 11 0 chr15 68232184 68232273 -35262701 + (TC)n Simple_repeat Simple_repeat 1 90 0 3 1105 209 161 0 0 chr15 68232274 68232305 -35262669 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1105 460 298 76 6 chr15 68232333 68232505 -35262469 - MLT2D LTR ERVL -51 363 180 3 1105 312 27 0 0 chr15 68233830 68233867 -35261107 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1105 2837 229 109 24 chr15 68234920 68235739 -35259235 + RMER19B LTR ERVK 1 888 -14 3 1105 487 300 44 16 chr15 68235951 68236362 -35258612 + L1MEg LINE L1 1965 2344 -4600 3 1105 1183 151 24 0 chr15 68236437 68236649 -35258325 - URR1B DNA MER1_type -1 224 8 3 1105 572 263 252 23 chr15 68236670 68237098 -35257876 + L1_Mm LINE L1 4051 4576 -1307 3 1105 2934 192 90 32 chr15 68237096 68237855 -35257119 - L1_Rod LINE L1 -3423 2424 1622 3 1105 1375 184 60 17 chr15 68237824 68238252 -35256722 - L1_Rod LINE L1 -4381 1466 1023 3 1105 1031 232 17 4 chr15 68238263 68238497 -35256477 - L1_Rod LINE L1 -6630 978 742 3 1105 265 282 49 49 chr15 68238624 68238747 -35256227 - L1_Rod LINE L1 -6963 645 523 3 1105 217 352 0 0 chr15 68239039 68239110 -35255864 + MIR SINE MIR 31 101 -161 3 1105 330 279 0 0 chr15 68239841 68239920 -35255054 + Lx8 LINE L1 7109 7187 -286 3 1105 24 0 0 0 chr15 68239966 68239990 -35254984 + AT_rich Low_complexity Low_complexity 1 24 0 3 1105 295 329 78 32 chr15 68242513 68242667 -35252307 - RSINE1 SINE B4 -4 161 1 3 1105 2684 221 101 40 chr15 68242972 68243407 -35251567 - RMER13A LTR ERVK -21 839 384 3 1105 1175 88 0 0 chr15 68243407 68243555 -35251419 - B1_Mus1 SINE Alu 0 148 1 3 1105 2684 221 101 40 chr15 68243555 68243910 -35251064 - RMER13A LTR ERVK -477 383 1 3 1105 192 40 0 0 chr15 68248505 68248530 -35246444 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1105 251 233 0 16 chr15 68248980 68249041 -35245933 - L1MC4 LINE L1 -20 7975 7916 3 1105 318 107 0 0 chr15 68249096 68249152 -35245822 + (CAGA)n Simple_repeat Simple_repeat 3 58 0 3 1105 887 304 113 35 chr15 68249620 68250159 -35244815 - L1MC4 LINE L1 -146 7896 7316 3 1105 265 295 42 0 chr15 68251462 68251557 -35243417 - MLT1C LTR MaLR -9 458 360 3 1105 392 317 24 24 chr15 68252742 68252865 -35242109 + MTEa LTR MaLR 48 170 -209 3 1105 1087 81 6 6 chr15 68252867 68253028 -35241946 + (GGGAGA)n Simple_repeat Simple_repeat 6 166 0 3 1105 328 319 129 16 chr15 68253373 68253567 -35241407 + RMER15 LTR ERVL 346 561 -14 3 1105 2770 349 62 33 chr15 68253619 68254184 -35240790 + MTEa-int LTR MaLR 1 582 -998 3 1105 4136 72 72 0 chr15 68254184 68254743 -35240231 + L1_Mus3 LINE L1 6040 6638 0 3 1105 2770 349 62 33 chr15 68254743 68255710 -35239264 + MTEa-int LTR MaLR 583 1578 -2 3 1105 397 340 67 51 chr15 68255713 68256033 -35238941 + MTEa LTR MaLR 2 335 -44 3 1105 1075 288 114 30 chr15 68256157 68256483 -35238491 - Lx8 LINE L1 -28 7445 7069 3 1105 1836 114 55 70 chr15 68256483 68256812 -35238162 - ORR1A3 LTR MaLR 0 326 3 3 1105 1075 276 58 39 chr15 68256812 68257041 -35237933 - Lx8 LINE L1 -405 7068 6821 3 1105 273 342 78 32 chr15 68257279 68257433 -35237541 - RSINE1 SINE B4 -4 161 1 3 1105 5225 60 6 1 chr15 68257659 68258313 -35236661 - L1_Mus3 LINE L1 0 6638 5982 3 1105 327 266 35 0 chr15 68259047 68259160 -35235814 - MER5A1 DNA MER1_type -48 118 2 3 1105 197 122 0 47 chr15 68259819 68259862 -35235112 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 3 1105 435 118 0 0 chr15 68261087 68261163 -35233811 + (CA)n Simple_repeat Simple_repeat 2 77 0 3 1105 446 336 54 7 chr15 68261199 68261346 -35233628 + B4 SINE B4 135 288 -4 3 1105 518 315 48 75 chr15 68261422 68261796 -35233178 - MLT1A0 LTR MaLR 0 365 2 3 1105 822 217 91 5 chr15 68262901 68263100 -35231874 - B3 SINE B2 0 216 1 3 1105 225 147 78 26 chr15 68263247 68263324 -35231650 + Charlie12 DNA MER1_type 436 516 -2357 3 1105 459 291 124 21 chr15 68263379 68263572 -35231402 + MIR SINE MIR 40 252 -10 3 1105 251 258 62 0 chr15 68263700 68263797 -35231177 - MER91B DNA Tip100 -24 166 64 3 1105 197 225 84 0 chr15 68264403 68264474 -35230500 + MIR SINE MIR 120 196 -66 3 1105 1535 176 68 68 chr15 68264634 68264821 -35230153 - ORR1C2 LTR MaLR 0 384 177 3 1105 450 114 0 0 chr15 68264821 68264900 -35230074 + (CA)n Simple_repeat Simple_repeat 2 80 0 3 1105 1535 176 68 68 chr15 68264900 68265096 -35229878 - ORR1C2 LTR MaLR -208 176 1 3 1105 252 0 0 0 chr15 68268590 68268618 -35226356 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1105 217 293 0 0 chr15 68268718 68268776 -35226198 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 1105 235 367 92 13 chr15 68270031 68270183 -35224791 - MLT1J2 LTR MaLR -4 444 281 3 1105 586 309 164 54 chr15 68270792 68270989 -35223985 + MLT2B3 LTR ERVL 1 237 -317 3 1105 2952 73 12 30 chr15 68270989 68271396 -35223578 + MTB LTR MaLR 1 400 0 3 1105 586 309 164 54 chr15 68271396 68271660 -35223314 + MLT2B3 LTR ERVL 238 513 -41 3 1105 351 0 0 0 chr15 68272616 68272655 -35222319 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1105 239 340 26 26 chr15 68272666 68272817 -35222157 - MIRm SINE MIR -94 174 24 3 1105 594 0 0 0 chr15 68273124 68273190 -35221784 + (GA)n Simple_repeat Simple_repeat 1 66 0 3 1105 1159 60 18 12 chr15 68274221 68274389 -35220585 - B2_Mm2 SINE B2 -25 170 2 3 1105 310 287 31 150 chr15 68275348 68275541 -35219433 + L1M3 LINE L1 5559 5728 -461 3 1105 318 315 83 9 chr15 68275554 68275663 -35219311 + B1_Mur2 SINE Alu 6 122 -27 3 1105 1154 303 75 8 chr15 68275755 68276258 -35218716 + L1MA6 LINE L1 5737 6273 -27 3 1105 192 200 0 0 chr15 68276258 68276298 -35218676 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 1105 256 259 9 18 chr15 68278183 68278297 -35216677 + GA-rich Low_complexity Low_complexity 1 113 0 3 1105 324 48 0 0 chr15 68278473 68278515 -35216459 + (TTTA)n Simple_repeat Simple_repeat 4 45 0 3 1105 312 127 0 52 chr15 68278533 68278591 -35216383 - B2_Mm2 SINE B2 -94 101 47 3 1105 886 101 201 0 chr15 68278646 68278795 -35216179 - B2_Mm1t SINE B2 -14 179 1 3 1105 773 242 171 12 chr15 68279145 68279396 -35215578 - B4 SINE B4 0 292 2 3 1105 257 366 44 7 chr15 68279958 68280093 -35214881 + MLT1N2 LTR MaLR 67 206 -356 3 1105 535 264 27 20 chr15 68280189 68280336 -35214638 - RSINE1 SINE B4 -11 154 7 3 1105 679 297 0 26 chr15 68280825 68281015 -35213959 + B3 SINE B2 7 191 -25 3 1105 326 295 49 21 chr15 68281377 68281519 -35213455 + MLT1F LTR MaLR 21 166 -382 3 1105 234 315 0 14 chr15 68281823 68281897 -35213077 + MLT1F LTR MaLR 183 255 -293 3 1105 228 120 160 0 chr15 68282042 68282092 -35212882 + MLT1F LTR MaLR 448 505 -43 3 1105 200 271 0 0 chr15 68282816 68282864 -35212110 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1105 282 369 112 94 chr15 68282872 68283159 -35211815 - B4 SINE B4 0 292 1 3 1105 205 156 0 0 chr15 68283959 68283991 -35210983 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1105 15060 44 5 1 chr15 68284345 68286381 -35208593 - L1Md_F2 LINE L1 -492 6090 4045 3 1105 3620 60 0 15 chr15 68286381 68286854 -35208120 + L1Md_F2 LINE L1 6117 6582 0 3 1105 259 314 0 0 chr15 68287075 68287145 -35207829 + MLT1D LTR MaLR 3 72 -433 3 1105 484 338 13 7 chr15 68287208 68287360 -35207614 - RSINE1 SINE B4 -10 155 3 3 1105 482 294 171 21 chr15 68287363 68287703 -35207271 + MLT1D LTR MaLR 107 497 -8 3 1105 883 168 124 25 chr15 68287743 68287944 -35207030 + URR1A DNA MER1_type 6 226 0 3 1106 342 0 0 0 chr15 68289352 68289390 -35205584 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 3 1106 3788 60 17 0 chr15 68289885 68290352 -35204622 - MT2C_Mm LTR ERVL 0 475 1 3 1106 229 341 0 0 chr15 68291714 68291852 -35203122 - L1MA9 LINE L1 -7 6305 6168 3 1106 1857 200 32 13 chr15 68291852 68292227 -35202747 - RLTR14 LTR ERV1 0 382 1 3 1106 571 328 38 21 chr15 68292399 68292636 -35202338 - RLTR14-int LTR ERV1 -183 5134 4894 3 1106 834 143 236 0 chr15 68293064 68293246 -35201728 - URR1A DNA MER1_type 0 226 2 3 1106 552 214 16 8 chr15 68293295 68293422 -35201552 - RLTR14 LTR ERV1 -242 140 13 3 1106 432 0 0 0 chr15 68293473 68293521 -35201453 + (TC)n Simple_repeat Simple_repeat 2 49 0 3 1106 336 24 0 0 chr15 68293531 68293572 -35201402 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 1106 380 234 82 41 chr15 68293585 68293732 -35201242 - L1MA9 LINE L1 -164 6148 5996 3 1106 212 319 93 14 chr15 68294966 68295106 -35199868 - MIRm SINE MIR -77 199 49 3 1106 186 103 0 0 chr15 68295554 68295583 -35199391 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 1106 423 245 135 20 chr15 68296204 68296372 -35198602 + ORR1E LTR MaLR 7 183 -187 3 1106 279 267 85 9 chr15 68296392 68296498 -35198476 + ORR1E LTR MaLR 261 374 -5 3 1106 347 202 11 0 chr15 68298463 68298557 -35196417 + CT-rich Low_complexity Low_complexity 1 95 0 3 1106 296 273 150 26 chr15 68298574 68298687 -35196287 - ID_B1 SINE B4 -21 203 77 3 1106 382 349 53 68 chr15 68299071 68299412 -35195562 - MLT1A1 LTR MaLR -60 348 1 3 1106 251 180 0 39 chr15 68300243 68300295 -35194679 + L2a LINE L2 3353 3402 -24 3 1106 785 251 81 10 chr15 68301979 68302188 -35192786 + B4A SINE B4 1 224 -68 3 1106 1147 62 14 0 chr15 68302941 68303087 -35191887 - B1_Mus1 SINE Alu 0 148 1 3 1106 829 309 82 31 chr15 68303270 68303791 -35191183 + L2 LINE L2 2239 2786 -633 3 1106 198 0 0 0 chr15 68305348 68305370 -35189604 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1106 678 195 263 6 chr15 68308493 68308668 -35186306 - URR1B DNA MER1_type -5 220 1 3 1106 189 336 41 66 chr15 68309212 68309333 -35185641 - MIRm SINE MIR -121 155 38 3 1106 220 229 0 0 chr15 68310382 68310430 -35184544 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1106 259 212 161 32 chr15 68310590 68310705 -35184269 - L1MA6 LINE L1 -342 5961 5836 3 1106 656 107 8 0 chr15 68310771 68310892 -35184082 + (TTTC)n Simple_repeat Simple_repeat 3 124 0 3 1106 238 195 0 0 chr15 68310922 68310963 -35184011 + CT-rich Low_complexity Low_complexity 1 41 0 3 1106 292 338 60 84 chr15 68311221 68311376 -35183598 - MLT1E1A LTR MaLR -6 674 528 4 1106 402 39 0 0 chr15 68311376 68311428 -35183546 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1106 292 342 62 83 chr15 68311428 68311552 -35183422 - MLT1E1A LTR MaLR -153 527 346 4 1106 21 57 0 0 chr15 68312312 68312347 -35182627 + AT_rich Low_complexity Low_complexity 1 35 0 4 1106 1141 251 47 44 chr15 68312633 68313031 -35181943 + MTE2a LTR MaLR 13 405 -14 4 1106 312 330 54 27 chr15 68314410 68314522 -35180452 - LTR75 LTR ERVL -436 126 12 4 1106 1466 82 0 20 chr15 68315240 68315439 -35179535 + B2_Mm2 SINE B2 1 195 0 4 1106 23 0 0 0 chr15 68316044 68316067 -35178907 + AT_rich Low_complexity Low_complexity 1 23 0 4 1106 224 329 79 0 chr15 68317490 68317566 -35177408 - B4A SINE B4 -123 169 88 4 1106 1047 203 61 0 chr15 68317734 68317946 -35177028 + URR1B DNA MER1_type 1 225 0 4 1106 1280 96 16 11 chr15 68318399 68318588 -35176386 - B2_Mm2 SINE B2 -1 194 5 4 1106 369 341 24 0 chr15 68319514 68319640 -35175334 + B1F2 SINE Alu 12 140 -9 4 1106 309 311 90 48 chr15 68319651 68319840 -35175134 + ID_B1 SINE B4 3 199 -25 4 1106 395 266 0 26 chr15 68319725 68319841 -35175133 + B1F SINE Alu 10 122 -27 4 1106 277 330 28 0 chr15 68320018 68320124 -35174850 - MIRc SINE MIR -119 149 41 4 1106 249 57 0 0 chr15 68321681 68321716 -35173258 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1106 449 60 45 0 chr15 68321759 68321826 -35173148 + (TTTTC)n Simple_repeat Simple_repeat 4 73 0 4 1106 3452 72 0 0 chr15 68321837 68322269 -35172705 - L1_Mus1 LINE L1 0 6567 6136 4 1106 1121 70 0 0 chr15 68322270 68322412 -35172562 - B1_Mus1 SINE Alu -5 143 2 4 1106 345 24 0 0 chr15 68325084 68325126 -35169848 + (TTA)n Simple_repeat Simple_repeat 3 44 0 4 1106 348 289 96 0 chr15 68325398 68325502 -35169472 + PB1 SINE Alu 11 124 -3 4 1106 275 286 0 0 chr15 68325517 68325580 -35169394 + ID4_ SINE ID 3 65 -18 4 1106 831 248 153 22 chr15 68325640 68325954 -35169020 - ORR1E LTR MaLR -4 355 1 4 1106 241 340 45 9 chr15 68326627 68326737 -35168237 + PB1D7 SINE Alu 1 114 -6 4 1106 21 0 0 0 chr15 68327681 68327702 -35167272 + AT_rich Low_complexity Low_complexity 1 21 0 4 1106 300 233 0 0 chr15 68327759 68327832 -35167142 + (TA)n Simple_repeat Simple_repeat 1 73 0 4 1106 243 294 11 0 chr15 68328344 68328436 -35166538 - MER113A DNA MER1_type -7 307 215 4 1106 239 229 0 0 chr15 68328507 68328555 -35166419 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1106 490 248 122 18 chr15 68328984 68329206 -35165768 + L1M4 LINE L1 2129 2373 -3773 4 1106 339 281 96 21 chr15 68329225 68329465 -35165509 + L1MEg LINE L1 1149 1406 -4836 4 1106 909 154 65 0 chr15 68329656 68329825 -35165149 - B2_Mm2 SINE B2 -14 181 2 4 1106 315 324 87 27 chr15 68329953 68330251 -35164723 + L1MEg LINE L1 1979 2294 -3872 4 1106 722 316 47 31 chr15 68330295 68330701 -35164273 + L1MEg LINE L1 2332 2747 -3399 4 1106 838 101 7 41 chr15 68330810 68330955 -35164019 + B2_Mm2 SINE B2 38 177 -18 4 1106 302 285 99 43 chr15 68331013 68331266 -35163708 + L1MEg LINE L1 2945 3211 -2935 4 1106 281 234 71 0 chr15 68331307 68331395 -35163579 + PB1D10 SINE Alu 1 101 -19 4 1106 1057 94 27 6 chr15 68331407 68331743 -35163231 + (TC)n Simple_repeat Simple_repeat 1 343 0 4 1106 268 249 152 5 chr15 68332128 68332247 -35162727 - MER63D DNA AcHobo -646 415 285 4 1106 248 389 55 7 chr15 68332358 68332503 -35162471 + MIRb SINE MIR 10 161 -107 4 1106 192 300 17 0 chr15 68332527 68332587 -35162387 - L2b LINE L2 0 3375 3315 4 1106 246 315 123 72 chr15 68333310 68333546 -35161428 - L2c LINE L2 -13 3374 3127 4 1106 286 28 0 0 chr15 68333624 68333660 -35161314 + U2 snRNA snRNA 1 36 -152 4 1106 465 19 0 0 chr15 68336002 68336056 -35158918 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 1106 384 289 25 0 chr15 68336260 68336381 -35158593 + Tigger12c DNA MER2_type 26 149 -585 4 1106 389 323 75 0 chr15 68336499 68336685 -35158289 - MIRb SINE MIR -34 234 35 4 1106 243 340 147 28 chr15 68337103 68337490 -35157484 - L2 LINE L2 -395 3024 2592 4 1106 660 257 44 6 chr15 68338611 68338791 -35156183 - MTE2a LTR MaLR 0 379 193 4 1106 374 173 37 0 chr15 68339420 68339501 -35155473 + L1Md_F2 LINE L1 6499 6582 0 4 1106 207 345 0 44 chr15 68340346 68340437 -35154537 + MIRc SINE MIR 44 130 -138 4 1106 187 336 67 22 chr15 68341031 68341165 -35153809 - MIRb SINE MIR -36 232 93 4 1106 360 0 0 0 chr15 68341482 68341522 -35153452 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1106 948 119 0 0 chr15 68341522 68341698 -35153276 + (GA)n Simple_repeat Simple_repeat 1 177 0 4 1106 522 242 50 50 chr15 68341733 68341872 -35153102 - B3A SINE B2 -59 139 1 4 1106 277 314 32 8 chr15 68342675 68342800 -35152174 + ORR1E LTR MaLR 4 131 -228 4 1106 230 256 77 0 chr15 68342950 68343028 -35151946 + ORR1E LTR MaLR 293 376 -3 4 1106 234 236 88 22 chr15 68344533 68344624 -35150350 - MIR SINE MIR -56 206 110 4 1106 881 311 62 103 chr15 68344705 68345217 -35149757 + Lx8 LINE L1 6983 7473 0 4 1106 279 269 84 56 chr15 68345537 68345679 -35149295 - MIRb SINE MIR -15 253 108 4 1106 1892 63 4 4 chr15 68346509 68346763 -35148211 + L1_Mus3 LINE L1 6384 6637 -1 4 1106 239 410 17 2 chr15 68347302 68347441 -35147533 - MIRc SINE MIR -105 171 33 4 1106 215 352 16 31 chr15 68347944 68348073 -35146901 + MIR3 SINE MIR 47 173 -35 4 1106 308 351 23 46 chr15 68348853 68349026 -35145948 + MLT1H LTR MaLR 157 325 -224 4 1106 24 0 0 0 chr15 68349104 68349128 -35145846 + AT_rich Low_complexity Low_complexity 1 24 0 4 1106 613 191 0 0 chr15 68350607 68350717 -35144257 + B1_Mur1 SINE Alu 35 144 -5 4 1106 302 297 61 16 chr15 68351005 68351159 -35143815 + MIR SINE MIR 72 232 -36 4 1106 356 328 8 15 chr15 68352061 68352194 -35142780 + MLT1H LTR MaLR 418 549 0 4 1106 606 63 0 0 chr15 68352243 68352322 -35142652 + (CA)n Simple_repeat Simple_repeat 2 80 0 4 1106 283 287 124 76 chr15 68352384 68352569 -35142405 + MER121 Unknown Unknown 161 354 -58 4 1106 279 0 0 0 chr15 68352832 68352863 -35142111 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1106 980 285 113 47 chr15 68353790 68353840 -35141134 + Lx8 LINE L1 6927 6969 -504 4 1106 531 0 0 0 chr15 68353840 68353899 -35141075 + (CCA)n Simple_repeat Simple_repeat 1 59 0 4 1106 980 285 113 47 chr15 68353899 68354359 -35140615 + Lx8 LINE L1 6970 7471 -2 4 1106 1338 301 110 19 chr15 68354376 68355086 -35139888 + L1MA5 LINE L1 5100 5938 -362 4 1106 212 311 16 0 chr15 68355086 68355147 -35139827 + (CATG)n Simple_repeat Simple_repeat 1 62 0 4 1106 3028 110 91 4 chr15 68355374 68355859 -35139115 - Lx2 LINE L1 -84 6913 6387 4 1106 488 230 13 80 chr15 68355869 68356020 -35138954 - Lx5 LINE L1 0 7050 6910 4 1106 223 130 18 36 chr15 68357942 68357998 -35136976 - PB1D10 SINE Alu 0 117 63 4 1106 260 286 31 52 chr15 68358022 68358118 -35136856 + MLT2B3 LTR ERVL 24 117 -437 4 1106 17054 20 2 1 chr15 68358276 68360233 -35134741 + L1Md_A LINE L1 3628 5586 -297 4 1106 8418 24 30 0 chr15 68360233 68361200 -35133774 + L1Md_A LINE L1 5587 6582 0 4 1106 421 232 186 38 chr15 68361214 68361444 -35133530 + MTD LTR MaLR 65 345 -55 4 1106 583 285 122 16 chr15 68361444 68361633 -35133341 + ORR1D2 LTR MaLR 1 209 -150 4 1106 265 311 11 0 chr15 68361639 68361729 -35133245 + CT-rich Low_complexity Low_complexity 1 91 0 4 1106 180 0 0 0 chr15 68361729 68361749 -35133225 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 1106 568 179 115 46 chr15 68361774 68361959 -35133015 + ORR1D2 LTR MaLR 166 357 -17 4 1106 182 191 43 0 chr15 68363212 68363259 -35131715 - MIR3 SINE MIR -8 200 152 4 1106 371 318 62 11 chr15 68363641 68363819 -35131155 + MER20 DNA MER1_type 31 217 -2 4 1106 504 0 0 0 chr15 68363845 68363901 -35131073 + (T)n Simple_repeat Simple_repeat 1 56 0 4 1106 459 0 0 0 chr15 68364555 68364606 -35130368 + (CAGC)n Simple_repeat Simple_repeat 2 52 0 4 1106 266 309 78 16 chr15 68364663 68364791 -35130183 + MLT1A1 LTR MaLR 268 403 -5 4 1106 245 240 102 55 chr15 68365020 68365148 -35129826 + MIRc SINE MIR 22 155 -113 4 1106 795 266 78 2 chr15 68365264 68365553 -35129421 + L1MB3 LINE L1 5864 6179 -1 4 1106 705 316 76 16 chr15 68365629 68365944 -35129030 - Lx8 LINE L1 -30 7443 7110 4 1106 262 297 92 8 chr15 68367424 68367543 -35127431 - MIRm SINE MIR -134 142 14 4 1106 196 328 0 0 chr15 68368027 68368085 -35126889 - MIR3 SINE MIR -4 204 147 4 1106 190 379 0 15 chr15 68368031 68368098 -35126876 - L3b LINE CR1 -4 478 413 4 1106 246 105 0 0 chr15 68368817 68368855 -35126119 + (TC)n Simple_repeat Simple_repeat 1 38 0 4 1106 592 320 12 122 chr15 68368882 68369209 -35125765 - B4A SINE B4 0 292 2 4 1106 342 258 119 16 chr15 68371455 68371581 -35123393 + MER5B DNA MER1_type 9 147 -31 4 1106 915 168 9 76 chr15 68372474 68372699 -35122275 - Lx LINE L1 -1 6653 6444 4 1106 2408 101 3 6 chr15 68373002 68373330 -35121644 + ORR1A2 LTR MaLR 1 327 0 4 1106 8296 45 1 8 chr15 68374610 68376073 -35118901 - L1Md_F2 LINE L1 0 6582 5131 4 1106 234 342 78 9 chr15 68376102 68376217 -35118757 - MLT1E2 LTR MaLR -192 435 313 4 1106 184 139 111 0 chr15 68376582 68376618 -35118356 + L3 LINE CR1 891 930 -3559 4 1106 351 0 0 0 chr15 68377034 68377073 -35117901 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1106 242 302 163 16 chr15 68378100 68378294 -35116680 + MIR SINE MIR 11 245 -17 4 1106 2050 106 16 19 chr15 68378664 68378973 -35116001 + RLTR27 LTR ERVK 2 309 0 4 1106 809 245 40 47 chr15 68379189 68379463 -35115511 + B4A SINE B4 2 273 -19 4 1106 399 41 0 0 chr15 68379584 68379633 -35115341 + (CATA)n Simple_repeat Simple_repeat 2 50 0 4 1106 185 228 0 34 chr15 68381589 68381648 -35113326 + CT-rich Low_complexity Low_complexity 3 59 0 5 1106 201 213 0 0 chr15 68381664 68381711 -35113263 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1106 773 322 4 14 chr15 68381755 68382032 -35112942 - B4A SINE B4 -18 274 1 5 1106 894 274 40 11 chr15 68382286 68382559 -35112415 - L1MA5A LINE L1 -436 5861 5581 5 1106 2050 250 119 25 chr15 68383056 68383818 -35111156 + L1MC1 LINE L1 4854 5683 -2359 5 1106 270 0 0 0 chr15 68383818 68383848 -35111126 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 1106 2050 231 115 14 chr15 68383848 68384310 -35110664 + L1MC1 LINE L1 5684 6188 -145 5 1106 288 0 0 0 chr15 68384662 68384694 -35110280 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 5 1106 410 292 74 23 chr15 68385903 68386078 -35108896 - Lx8 LINE L1 -235 7238 7055 5 1106 2871 18 0 3 chr15 68388983 68389323 -35105651 - ORR1A0 LTR MaLR -7 339 1 5 1106 609 295 100 54 chr15 68389653 68390463 -35104511 - HAL1 LINE L1 -780 1727 881 5 1106 259 275 38 29 chr15 68391761 68391866 -35103108 + MIR SINE MIR 71 176 -86 5 1106 381 346 147 4 chr15 68392430 68392662 -35102312 - RMER15 LTR ERVL -15 560 296 5 1106 726 190 21 21 chr15 68392679 68392824 -35102150 - MTE2b LTR MaLR 0 379 235 5 1106 468 0 0 0 chr15 68393120 68393172 -35101802 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1106 296 303 103 26 chr15 68394121 68394392 -35100582 - Charlie5 DNA MER1_type -95 2529 2238 5 1106 302 310 17 25 chr15 68394385 68394504 -35100470 - Charlie5 DNA MER1_type -2495 129 12 5 1106 326 321 30 42 chr15 68394539 68394698 -35100276 + MIR SINE MIR 36 197 -79 5 1106 2607 71 6 0 chr15 68394900 68395239 -35099735 - L1_Mus4 LINE L1 -651 5985 5645 5 1106 2865 120 86 7 chr15 68395239 68395682 -35099292 + L1_Mus4 LINE L1 6158 6635 -1 5 1106 985 287 83 65 chr15 68396014 68396398 -35098576 - Lx8 LINE L1 -3 7470 7080 5 1106 4704 254 68 13 chr15 68396454 68396563 -35098411 - Lx9 LINE L1 -17 7627 7476 5 1106 396 0 0 0 chr15 68396563 68396607 -35098367 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1106 4704 254 68 13 chr15 68396607 68397750 -35097224 - Lx9 LINE L1 -169 7475 6307 5 1106 398 246 142 33 chr15 68397789 68398105 -35096869 - Lx9 LINE L1 -1409 6235 5760 5 1106 2481 223 66 21 chr15 68398108 68398759 -35096215 - Lx9 LINE L1 -193 5654 4975 5 1106 3468 281 91 25 chr15 68398781 68398866 -35096108 - Lx9 LINE L1 -5 7639 7541 5 1106 400 60 47 35 chr15 68398866 68398952 -35096022 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 5 1106 3468 281 91 25 chr15 68398952 68400085 -35094889 - Lx9 LINE L1 -104 7540 6340 5 1106 333 0 0 0 chr15 68400088 68400125 -35094849 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1106 423 283 222 12 chr15 68400229 68400572 -35094402 + Lx9 LINE L1 7210 7624 -20 5 1106 326 331 39 24 chr15 68400968 68401095 -35093879 + MIRc SINE MIR 2 130 -138 5 1106 339 382 117 6 chr15 68401255 68401426 -35093548 + LTR16E2 LTR ERVL 97 286 -282 5 1106 7584 101 9 6 chr15 68401639 68402791 -35092183 + L1_Mus3 LINE L1 5482 6637 -1 5 1106 1822 94 0 0 chr15 68402819 68403053 -35091921 + L1_Mus1 LINE L1 6333 6566 -1 5 1106 180 240 100 0 chr15 68403180 68403230 -35091744 + L2 LINE L2 1851 1905 -1514 5 1106 231 65 65 0 chr15 68403727 68403773 -35091201 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 1106 405 0 0 0 chr15 68403821 68403866 -35091108 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1106 314 296 0 60 chr15 68404397 68404530 -35090444 - Lx5 LINE L1 -35 7015 6891 5 1106 3682 64 0 32 chr15 68404867 68405335 -35089639 - L1Md_F2 LINE L1 -2 6580 6128 5 1106 4596 58 0 0 chr15 68405335 68406045 -35088929 + L1Md_F2 LINE L1 5430 6139 -443 5 1106 430 301 115 40 chr15 68407203 68407507 -35087467 - Lx8 LINE L1 -1096 6377 6051 5 1106 600 134 25 8 chr15 68407539 68407659 -35087315 - Lx2 LINE L1 -16 6981 6860 5 1106 516 301 14 14 chr15 68407824 68407969 -35087005 - Lx8 LINE L1 -745 6728 6584 5 1106 512 293 180 0 chr15 68408200 68408439 -35086535 + Lx8 LINE L1 7189 7470 -3 5 1106 195 382 76 6 chr15 68410339 68410497 -35084477 - MIRb SINE MIR -16 252 84 5 1106 254 295 30 15 chr15 68410838 68411018 -35083956 + (CATCC)n Simple_repeat Simple_repeat 1 182 0 5 1106 379 227 16 0 chr15 68411053 68411181 -35083793 + (CATCC)n Simple_repeat Simple_repeat 4 133 0 5 1106 334 157 60 13 chr15 68412103 68412200 -35082774 + MTEb LTR MaLR 256 376 -3 5 1106 981 299 168 35 chr15 68412286 68412345 -35082629 + L2 LINE L2 1856 1912 -1507 5 1106 195 42 0 0 chr15 68412345 68412369 -35082605 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 5 1106 981 299 168 35 chr15 68412369 68413023 -35081951 + L2 LINE L2 1913 2664 -755 5 1106 573 368 111 44 chr15 68413252 68413775 -35081199 + MLT1E3 LTR MaLR 62 619 -5 5 1106 1587 53 0 0 chr15 68413811 68414000 -35080974 + L1_Mus1 LINE L1 6379 6567 0 5 1106 22 0 0 0 chr15 68414000 68414022 -35080952 + AT_rich Low_complexity Low_complexity 1 22 0 5 1106 337 238 11 56 chr15 68414683 68414772 -35080202 - ORR1D1 LTR MaLR 0 374 290 5 1106 502 191 245 0 chr15 68414780 68414875 -35080099 - ORR1D1 LTR MaLR -191 183 64 5 1106 4165 75 11 0 chr15 68414875 68415395 -35079579 + L1_Mus1 LINE L1 6041 6566 -1 5 1106 502 191 245 0 chr15 68415395 68415446 -35079528 - ORR1D1 LTR MaLR -311 63 3 5 1106 217 336 51 51 chr15 68416439 68416577 -35078397 - MIRc SINE MIR -114 154 17 5 1106 810 239 19 19 chr15 68416619 68416828 -35078146 - Lx7 LINE L1 -16 7680 7472 5 1106 907 203 5 51 chr15 68416823 68416907 -35078067 + Lx7 LINE L1 7175 7251 -445 5 1106 3242 23 0 0 chr15 68416907 68417253 -35077721 + ORR1A0 LTR MaLR 1 346 0 5 1106 907 203 5 51 chr15 68417253 68417365 -35077609 + Lx7 LINE L1 7252 7362 -334 5 1106 295 357 48 60 chr15 68417421 68417588 -35077386 + MLT1F2 LTR MaLR 40 204 -356 5 1106 408 337 37 48 chr15 68417647 68417834 -35077140 + MLT1F2 LTR MaLR 314 498 -62 5 1107 186 383 17 0 chr15 68419696 68419811 -35075163 - L3b LINE CR1 -287 195 79 5 1107 240 376 39 37 chr15 68420003 68420203 -35074771 - MIRc SINE MIR -41 227 25 5 1107 462 18 0 0 chr15 68421033 68421088 -35073886 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 1107 997 132 7 20 chr15 68421164 68421311 -35073663 - B1_Mus2 SINE Alu -1 146 2 5 1107 1593 234 51 39 chr15 68421320 68421734 -35073240 + Lx9 LINE L1 7073 7491 -153 5 1107 655 134 0 0 chr15 68421753 68421850 -35073124 - L1_Mm LINE L1 -225 5658 5562 5 1107 1779 107 4 26 chr15 68421863 68422131 -35072843 + Lx2 LINE L1 6736 6997 0 5 1107 1210 69 7 0 chr15 68422146 68422291 -35072683 + B1_Mus2 SINE Alu 1 146 -1 5 1107 483 33 0 0 chr15 68422291 68422352 -35072622 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 1107 310 209 34 60 chr15 68422354 68422471 -35072503 + Lx9 LINE L1 7531 7644 0 5 1107 231 36 0 0 chr15 68423733 68423761 -35071213 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 5 1107 236 309 110 8 chr15 68424057 68424184 -35070790 - L2a LINE L2 -160 3266 3127 5 1107 383 149 14 0 chr15 68424498 68424572 -35070402 + CT-rich Low_complexity Low_complexity 4 78 0 5 1107 222 37 0 0 chr15 68429181 68429208 -35065766 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 5 1107 396 317 0 0 chr15 68429365 68429577 -35065397 + (TGGA)n Simple_repeat Simple_repeat 1 212 0 5 1107 870 310 107 27 chr15 68430634 68431373 -35063601 - L1ME3A LINE L1 -2 6171 5374 5 1107 364 98 16 16 chr15 68431662 68431724 -35063250 + RLTR25B LTR ERVK 967 1028 0 5 1107 747 33 0 0 chr15 68432340 68432430 -35062544 + (TC)n Simple_repeat Simple_repeat 2 91 0 5 1107 189 107 0 0 chr15 68432430 68432457 -35062517 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1107 504 0 0 0 chr15 68433206 68433262 -35061712 + (TTTA)n Simple_repeat Simple_repeat 1 56 0 5 1107 1016 83 90 0 chr15 68433262 68433406 -35061568 - B2_Mm2 SINE B2 -38 157 1 5 1107 3122 81 12 12 chr15 68433586 68433986 -35060988 + MTB LTR MaLR 1 400 0 5 1107 368 382 35 48 chr15 68435182 68435413 -35059561 + ORR1E LTR MaLR 1 228 -131 5 1107 411 256 0 0 chr15 68436300 68436382 -35058592 + B1F SINE Alu 37 118 -31 5 1107 210 128 0 0 chr15 68436386 68436425 -35058549 + (CAT)n Simple_repeat Simple_repeat 3 41 0 5 1107 3874 63 9 0 chr15 68437509 68437967 -35057007 - L1_Mus1 LINE L1 0 6567 6106 5 1107 1232 70 0 0 chr15 68437968 68438126 -35056848 + L1_Mus1 LINE L1 5956 6113 -454 5 1107 696 319 124 39 chr15 68439099 68440116 -35054858 - HAL1 LINE L1 -132 2375 1273 5 1107 23 0 0 0 chr15 68440128 68440151 -35054823 + AT_rich Low_complexity Low_complexity 1 23 0 5 1107 405 262 36 5 chr15 68440168 68440275 -35054699 - PB1D10 SINE Alu -6 114 6 5 1107 4342 57 19 0 chr15 68440655 68441260 -35053714 - L1Md_F2 LINE L1 -453 6129 5504 5 1107 3720 86 11 0 chr15 68441261 68441729 -35053245 + L1Md_F2 LINE L1 6099 6571 -11 5 1107 200 197 30 15 chr15 68441768 68441835 -35053139 + (TA)n Simple_repeat Simple_repeat 1 68 0 5 1107 428 325 8 0 chr15 68442459 68442582 -35052392 + MTEa LTR MaLR 3 126 -233 5 1107 430 301 78 24 chr15 68442712 68442879 -35052095 + MTEa LTR MaLR 204 379 0 5 1107 4756 65 3 3 chr15 68443283 68443858 -35051116 + L1_Mus3 LINE L1 6064 6638 0 5 1107 315 0 0 0 chr15 68443988 68444023 -35050951 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1107 1248 262 12 82 chr15 68444290 68444693 -35050281 + MTE2b LTR MaLR 5 379 0 5 1107 29 0 0 0 chr15 68445754 68445783 -35049191 + AT_rich Low_complexity Low_complexity 1 29 0 5 1107 270 0 0 0 chr15 68446070 68446100 -35048874 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 1107 483 73 0 0 chr15 68446105 68446173 -35048801 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 5 1107 845 151 7 0 chr15 68446179 68446331 -35048643 + CT-rich Low_complexity Low_complexity 3 155 0 5 1107 366 45 0 0 chr15 68446331 68446375 -35048599 + (TC)n Simple_repeat Simple_repeat 2 45 0 5 1107 533 308 48 21 chr15 68446466 68446655 -35048319 - L1MEb LINE L1 -5597 473 280 5 1107 449 291 20 60 chr15 68446984 68447134 -35047840 + MER58A DNA MER1_type 80 223 -1 5 1107 254 289 246 0 chr15 68447480 68447594 -35047380 - B1F SINE Alu -7 142 1 5 1107 188 34 0 33 chr15 68447615 68447645 -35047329 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1107 2520 68 3 58 chr15 68449277 68449623 -35045351 - ORR1A2 LTR MaLR 0 327 1 5 1107 237 295 16 0 chr15 68450345 68450406 -35044568 + MER5B DNA MER1_type 4 65 -113 5 1107 360 239 156 102 chr15 68450407 68450682 -35044292 + B4 SINE B4 3 292 0 5 1107 345 62 0 0 chr15 68450690 68450738 -35044236 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1107 236 317 28 19 chr15 68452857 68452963 -35042011 - L2c LINE L2 -222 3165 3059 6 1107 4745 139 16 46 chr15 68452974 68453896 -35041078 + RMER17A2 LTR ERVK 1 895 -11 6 1107 537 325 12 24 chr15 68454087 68454254 -35040720 - RSINE1 SINE B4 0 165 1 6 1107 759 179 0 0 chr15 68455716 68455861 -35039113 + T-rich Low_complexity Low_complexity 1 145 0 6 1107 205 115 96 0 chr15 68455903 68455955 -35039019 + CT-rich Low_complexity Low_complexity 4 60 0 6 1107 871 250 20 10 chr15 68456335 68456537 -35038437 - B3 SINE B2 -11 205 2 6 1107 455 227 0 8 chr15 68456836 68456965 -35038009 + GA-rich Low_complexity Low_complexity 2 129 0 6 1107 252 59 0 0 chr15 68457089 68457123 -35037851 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1107 403 75 45 0 chr15 68457124 68457191 -35037783 + (GGGA)n Simple_repeat Simple_repeat 4 73 0 6 1107 41276 16 1 6 chr15 68457851 68464378 -35030596 - L1Md_A LINE L1 0 6582 90 6 1107 508 135 56 0 chr15 68464462 68464551 -35030423 + Lx9 LINE L1 7383 7476 -168 6 1107 324 0 0 0 chr15 68464551 68464587 -35030387 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1107 481 160 57 0 chr15 68464604 68464710 -35030264 + Lx9 LINE L1 7531 7642 -2 6 1107 207 200 67 0 chr15 68465700 68465745 -35029229 - L4 LINE RTE -190 1839 1792 6 1107 7972 141 42 8 chr15 68466166 68467508 -35027466 - Lx2 LINE L1 0 6997 5610 6 1107 36969 51 8 0 chr15 68467475 68469153 -35025821 - L1Md_A LINE L1 0 5883 4196 6 1107 458 57 14 0 chr15 68469153 68469223 -35025751 + (CATAT)n Simple_repeat Simple_repeat 3 73 0 6 1107 36969 68 7 3 chr15 68469223 68472831 -35022143 - L1Md_A LINE L1 -1688 4195 615 6 1107 4358 141 64 11 chr15 68472832 68474237 -35020737 - L1Md_F LINE L1 -4172 1711 258 6 1107 3352 38 5 0 chr15 68474237 68474631 -35020343 - MTA_Mm LTR MaLR 0 396 1 6 1107 4087 198 82 35 chr15 68474631 68474679 -35020295 - L1Md_F LINE L1 -6467 257 209 6 1107 2502 145 25 60 chr15 68474671 68475141 -35019833 - L1VL4 LINE L1 -5534 768 315 6 1107 436 314 7 21 chr15 68475665 68475808 -35019166 + RSINE1 SINE B4 4 144 -21 6 1107 387 41 0 0 chr15 68475824 68475873 -35019101 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1107 297 0 0 0 chr15 68475873 68475905 -35019069 + (TC)n Simple_repeat Simple_repeat 1 33 0 6 1107 185 200 33 0 chr15 68476273 68476333 -35018641 + (CATA)n Simple_repeat Simple_repeat 2 63 0 6 1107 21 0 0 0 chr15 68476889 68476910 -35018064 + AT_rich Low_complexity Low_complexity 1 21 0 6 1107 459 0 0 0 chr15 68477629 68477680 -35017294 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 1107 201 158 0 26 chr15 68477988 68478027 -35016947 + (GTGTG)n Simple_repeat Simple_repeat 2 39 0 6 1107 774 317 13 60 chr15 68478032 68478334 -35016640 - B4A SINE B4 -2 290 3 6 1107 592 285 60 97 chr15 68478421 68478720 -35016254 + ORR1E LTR MaLR 3 290 -69 6 1107 794 221 78 16 chr15 68479191 68479384 -35015590 - MTEa LTR MaLR 0 379 175 6 1107 923 157 0 13 chr15 68479447 68479596 -35015378 - B1_Mus2 SINE Alu 0 147 1 6 1107 32 0 0 0 chr15 68479609 68479641 -35015333 + AT_rich Low_complexity Low_complexity 1 32 0 6 1107 544 307 36 12 chr15 68479641 68479806 -35015168 - MTEa LTR MaLR -210 169 1 6 1107 399 41 0 0 chr15 68480741 68480790 -35014184 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1107 269 236 25 127 chr15 68480935 68481097 -35013877 - MLT1F1 LTR MaLR 0 549 417 6 1107 226 359 56 25 chr15 68481157 68481317 -35013657 - MLT1F1 LTR MaLR -352 197 33 6 1107 630 301 53 71 chr15 68481376 68481601 -35013373 + MTE2a LTR MaLR 58 278 -101 6 1107 870 150 20 20 chr15 68481716 68481866 -35013108 + B1_Mur4 SINE Alu 1 150 0 6 1107 463 284 199 34 chr15 68481954 68482275 -35012699 + MLT1A1 LTR MaLR 33 406 -2 6 1107 414 305 79 0 chr15 68482360 68482524 -35012450 - MER58A DNA MER1_type -18 206 30 6 1107 1228 246 70 20 chr15 68482578 68482934 -35012040 + ORR1D1 LTR MaLR 1 374 0 6 1107 308 192 0 161 chr15 68483366 68483484 -35011490 + MTE2b LTR MaLR 2 100 -279 6 1107 558 284 23 86 chr15 68483518 68483737 -35011237 + MTE2b LTR MaLR 81 285 -94 6 1107 1207 254 22 60 chr15 68483737 68484105 -35010869 + ORR1E LTR MaLR 1 354 -5 6 1107 381 240 10 0 chr15 68484110 68484210 -35010764 + MTE2b LTR MaLR 279 379 0 6 1107 269 332 110 43 chr15 68484918 68485264 -35009710 - L2 LINE L2 -565 2854 2486 6 1107 363 361 62 22 chr15 68485360 68485680 -35009294 - L2 LINE L2 -942 2477 2145 6 1107 278 275 57 38 chr15 68486053 68486142 -35008832 + PB1D9 SINE Alu 13 107 -13 6 1107 942 143 0 0 chr15 68486142 68486303 -35008671 + (GAA)n Simple_repeat Simple_repeat 2 162 0 6 1107 278 275 57 38 chr15 68486303 68486319 -35008655 + PB1D9 SINE Alu 108 120 0 6 1107 648 0 0 0 chr15 68487100 68487172 -35007802 + (GGA)n Simple_repeat Simple_repeat 2 73 0 6 1107 269 26 0 49 chr15 68487185 68487226 -35007748 - U2 snRNA snRNA -149 39 1 6 1107 722 329 32 7 chr15 68488029 68488308 -35006666 - B4 SINE B4 -6 286 1 6 1107 9462 101 26 13 chr15 68488352 68489731 -35005243 - Lx3B LINE L1 -1 6972 5588 6 1107 2426 38 10 0 chr15 68489731 68490021 -35004953 - L1Md_F3 LINE L1 -1 6583 6291 6 1107 4370 100 46 14 chr15 68490021 68490388 -35004586 - Lx3B LINE L1 -296 5590 5214 6 1107 299 281 21 10 chr15 68490989 68491086 -35003888 + MLT1H2 LTR MaLR 34 131 -358 6 1107 492 266 140 108 chr15 68491579 68491921 -35003053 - MTEa LTR MaLR -26 353 1 6 1107 801 65 0 0 chr15 68492175 68492283 -35002691 + (TTCTC)n Simple_repeat Simple_repeat 4 111 0 6 1107 352 157 70 14 chr15 68492336 68492407 -35002567 - ORR1B2 LTR MaLR -292 75 1 6 1107 937 268 161 44 chr15 68492601 68493030 -35001944 - Lx8 LINE L1 -1 7472 6994 6 1107 284 257 14 0 chr15 68493034 68493108 -35001866 + Lx8 LINE L1 6880 6954 -519 6 1107 990 323 7 0 chr15 68494585 68494854 -35000120 + B4A SINE B4 22 292 0 6 1107 240 130 0 0 chr15 68494861 68494907 -35000067 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1107 348 283 16 32 chr15 68494926 68495050 -34999924 + GA-rich Low_complexity Low_complexity 1 122 0 6 1107 1042 55 31 0 chr15 68498444 68498607 -34996367 + (TC)n Simple_repeat Simple_repeat 1 168 0 6 1107 486 0 0 0 chr15 68498607 68498661 -34996313 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1107 743 311 56 16 chr15 68498671 68498923 -34996051 - B4A SINE B4 -28 264 3 6 1107 1897 196 34 3 chr15 68499059 68499412 -34995562 - Lx5 LINE L1 0 7050 6687 6 1107 3000 178 48 11 chr15 68499424 68499985 -34994989 - Lx5 LINE L1 -411 6639 6058 6 1107 2306 131 101 31 chr15 68500000 68500023 -34994951 - Lx5 LINE L1 -1017 6033 6021 1 1107 1924 109 71 65 chr15 68500023 68500405 -34994569 - Lx LINE L1 -7 6647 6264 2 1107 5932 152 50 13 chr15 68500405 68501608 -34993366 - Lx5 LINE L1 -1030 6020 4751 1 1107 1360 141 8 38 chr15 68501606 68501842 -34993132 - Lx5 LINE L1 -3244 2633 2405 1 1107 870 56 0 0 chr15 68501845 68501952 -34993022 + U6 snRNA snRNA 1 107 0 3 1107 34550 25 3 11 chr15 68501952 68506074 -34988900 + L1Md_T LINE L1 1497 5586 -297 4 1107 8691 28 0 0 chr15 68506075 68507068 -34987906 + L1Md_T LINE L1 5588 6580 -2 4 1107 6031 170 26 26 chr15 68507070 68508502 -34986472 - Lx5 LINE L1 -3464 2413 992 1 1107 435 298 47 21 chr15 68508774 68508966 -34986008 + ORR1E LTR MaLR 41 237 -122 5 1107 485 231 43 0 chr15 68509876 68509993 -34984981 - ORR1D1 LTR MaLR -250 124 3 6 1107 1915 265 44 32 chr15 68510000 68510569 -34984405 - Lx8 LINE L1 -672 6801 6226 7 1107 21 36 0 0 chr15 68510675 68510703 -34984271 + AT_rich Low_complexity Low_complexity 1 28 0 8 1107 679 296 86 9 chr15 68510751 68510763 -34984211 - Lx8 LINE L1 -346 7127 7118 9 1107 324 0 0 0 chr15 68510763 68510799 -34984175 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1107 679 296 86 9 chr15 68510799 68511018 -34983956 - Lx8 LINE L1 -356 7117 6879 9 1107 24 106 0 0 chr15 68511420 68511514 -34983460 + AT_rich Low_complexity Low_complexity 1 94 0 1 1107 1304 188 66 113 chr15 68512011 68512390 -34982584 - MTEb LTR MaLR -17 362 2 1 1107 706 203 22 0 chr15 68513120 68513258 -34981716 + MTE2b LTR MaLR 102 242 -137 1 1107 2377 53 3 3 chr15 68513257 68513579 -34981395 + IAPEY2_LTR LTR ERVK 33 354 -3 1 1107 3025 62 5 0 chr15 68514943 68515312 -34979662 + L1_Mus1 LINE L1 6022 6392 -175 1 1107 6716 8 0 0 chr15 68515310 68516290 -34978684 - L1Md_A LINE L1 -456 6126 5147 1 1107 4542 8 0 0 chr15 68516290 68516787 -34978187 + L1Md_A LINE L1 6086 6582 0 1 1107 1520 42 0 10 chr15 68516799 68516992 -34977982 + L1_Mus1 LINE L1 6376 6566 -1 1 1107 213 312 72 18 chr15 68517271 68517382 -34977592 - MIR SINE MIR -126 136 20 1 1107 218 284 7 7 chr15 68518931 68519066 -34975908 + GA-rich Low_complexity Low_complexity 1 135 0 1 1107 208 135 0 0 chr15 68519229 68519266 -34975708 + (A)n Simple_repeat Simple_repeat 1 37 0 1 1107 462 132 0 0 chr15 68519718 68519794 -34975180 + (TCCC)n Simple_repeat Simple_repeat 1 76 0 2 1107 686 266 18 18 chr15 68519845 68520063 -34974911 - B4 SINE B4 -72 220 3 2 1107 234 299 88 0 chr15 68521819 68521956 -34973018 + Charlie7a DNA MER1_type 94 242 -30 2 1107 189 107 0 0 chr15 68522260 68522288 -34972686 + (CATG)n Simple_repeat Simple_repeat 3 30 0 2 1107 2739 179 8 4 chr15 68522373 68522866 -34972108 + Lx4A LINE L1 6562 7056 -2 2 1107 194 0 39 0 chr15 68522887 68522913 -34972061 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1107 180 0 0 0 chr15 68523338 68523358 -34971616 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2 1107 706 308 82 57 chr15 68524151 68524482 -34970492 + MTEa LTR MaLR 3 341 -38 2 1107 254 377 82 28 chr15 68524559 68524911 -34970063 - LTR33 LTR ERVL -103 412 42 2 1107 495 371 15 27 chr15 68526705 68526965 -34968009 + MLT1C LTR MaLR 207 463 -4 2 1107 812 214 56 166 chr15 68527457 68527794 -34967180 - MTE2b LTR MaLR -76 303 4 3 1107 260 365 64 70 chr15 68527836 68528163 -34966811 - ORR1D2 LTR MaLR -16 354 30 3 1107 356 184 10 94 chr15 68528205 68528301 -34966673 - MTEa LTR MaLR -291 88 1 3 1107 315 0 0 0 chr15 68528630 68528665 -34966309 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1107 291 140 0 0 chr15 68528665 68528715 -34966259 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 3 1107 1232 303 77 34 chr15 68528779 68529302 -34965672 - Lx9 LINE L1 -289 7355 6811 3 1107 306 0 0 0 chr15 68529486 68529520 -34965454 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1107 326 316 0 0 chr15 68529520 68529596 -34965378 - RSINE1 SINE B4 -41 124 49 3 1107 1179 316 99 25 chr15 68529639 68530328 -34964646 - Lx8 LINE L1 -25 7448 6709 3 1107 469 258 255 50 chr15 68530329 68530647 -34964327 - L1_Rod LINE L1 -6326 846 464 3 1107 411 98 0 0 chr15 68531143 68531204 -34963770 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1107 607 289 0 0 chr15 68531232 68531384 -34963590 - B3A SINE B2 -46 152 1 4 1107 432 0 0 0 chr15 68531392 68531440 -34963534 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 4 1107 231 114 0 0 chr15 68531444 68531479 -34963495 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 1107 273 274 142 18 chr15 68531491 68531773 -34963201 - L1M5 LINE L1 -2991 3155 2839 4 1107 201 321 99 50 chr15 68532418 68532559 -34962415 - MIRb SINE MIR -27 241 94 4 1107 2937 149 100 30 chr15 68532569 68533169 -34961805 + RLTR26 LTR ERVK 1 642 0 4 1107 1018 266 55 19 chr15 68533229 68533554 -34961420 + MLT1A LTR MaLR 24 360 -14 4 1107 366 79 16 0 chr15 68534206 68534269 -34960705 + ORR1A4 LTR MaLR 1 64 -265 4 1107 3355 38 2 2 chr15 68534273 68534669 -34960305 - MTA_Mm LTR MaLR 0 396 1 4 1107 4722 20 2 0 chr15 68534669 68535266 -34959708 - MTA_Mm-int LTR MaLR 0 1098 501 4 1107 1554 36 0 0 chr15 68535272 68535468 -34959506 - MT2_Mm LTR ERVL 0 493 298 5 1107 1188 40 0 0 chr15 68535463 68535636 -34959338 + MTA_Mm-int LTR MaLR 926 1098 0 5 1107 3526 23 2 0 chr15 68535636 68536031 -34958943 + MTA_Mm LTR MaLR 1 396 0 5 1107 295 71 0 0 chr15 68536032 68536074 -34958900 + ORR1A4 LTR MaLR 288 329 0 4 1107 530 233 27 38 chr15 68536309 68536492 -34958482 - HAL1-2a_MD LINE L1 -502 2522 2342 5 1107 314 287 30 0 chr15 68536492 68536593 -34958381 + (ATGGTG)n Simple_repeat Simple_repeat 3 106 0 5 1107 1021 296 73 70 chr15 68538215 68538646 -34956328 + ORR1E-int LTR MaLR 1060 1462 -47 5 1107 436 302 62 66 chr15 68538719 68538992 -34955982 + ORR1E LTR MaLR 82 353 -6 5 1107 1748 163 47 9 chr15 68539388 68539729 -34955245 - ORR1B1 LTR MaLR 0 394 41 5 1107 21 71 0 0 chr15 68540752 68540794 -34954180 + AT_rich Low_complexity Low_complexity 1 42 0 5 1107 1144 88 0 0 chr15 68540978 68541125 -34953849 + B1_Mus1 SINE Alu 2 148 0 5 1107 231 114 0 0 chr15 68541125 68541160 -34953814 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1107 283 258 0 0 chr15 68541218 68541280 -34953694 + B4A SINE B4 2 63 -229 5 1107 312 222 28 0 chr15 68541774 68541882 -34953092 + GA-rich Low_complexity Low_complexity 1 111 0 6 1107 180 0 0 0 chr15 68541993 68542013 -34952961 + (T)n Simple_repeat Simple_repeat 1 20 0 6 1107 1272 34 0 0 chr15 68542013 68542160 -34952814 - B1_Mus2 SINE Alu 0 147 1 6 1107 1672 226 86 34 chr15 68542321 68542820 -34952154 + RMER5 LTR ERV1 5 529 -5 6 1107 262 317 0 19 chr15 68542826 68542929 -34952045 + (TATG)n Simple_repeat Simple_repeat 4 104 0 6 1107 657 340 9 9 chr15 68543219 68543433 -34951541 + B4A SINE B4 2 215 -77 6 1107 233 352 82 78 chr15 68546239 68546495 -34948479 + L2b LINE L2 3107 3363 -12 6 1107 524 191 0 0 chr15 68546932 68547026 -34947948 + B3 SINE B2 15 108 -108 6 1107 520 14 29 0 chr15 68547744 68547813 -34947161 + (TC)n Simple_repeat Simple_repeat 2 72 0 6 1107 273 285 83 7 chr15 68548144 68548289 -34946685 + Lx7 LINE L1 7539 7694 -2 6 1107 3205 44 18 5 chr15 68548303 68548694 -34946280 + MTA_Mm LTR MaLR 1 396 0 7 1107 377 232 20 20 chr15 68548695 68548796 -34946178 - MTEa LTR MaLR 0 379 279 7 1107 1971 138 93 14 chr15 68549181 68549535 -34945439 - Lx LINE L1 -7 6647 6266 7 1107 252 0 0 0 chr15 68549603 68549631 -34945343 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 7 1108 606 307 5 19 chr15 68551230 68551436 -34943538 + B3 SINE B2 2 204 -12 7 1108 188 240 20 20 chr15 68551529 68551580 -34943394 - MIRc SINE MIR -123 145 95 7 1108 423 0 0 0 chr15 68552842 68552889 -34942085 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 1108 195 292 150 59 chr15 68553260 68553413 -34941561 + MIRb SINE MIR 90 256 -12 7 1108 269 215 0 30 chr15 68553423 68553490 -34941484 + CT-rich Low_complexity Low_complexity 2 66 0 7 1108 306 312 62 34 chr15 68553508 68553654 -34941320 - HAL1-3A_ME LINE L1 -419 2439 2290 7 1108 468 148 8 34 chr15 68555087 68555170 -34939804 + (CATA)n Simple_repeat Simple_repeat 1 81 0 8 1108 3477 28 2 0 chr15 68555170 68555565 -34939409 - MTA_Mm LTR MaLR 0 396 1 8 1108 468 148 8 34 chr15 68555565 68555600 -34939374 + (CATA)n Simple_repeat Simple_repeat 2 36 0 8 1108 483 69 0 0 chr15 68555628 68555700 -34939274 + (CA)n Simple_repeat Simple_repeat 1 72 0 8 1108 420 306 119 45 chr15 68556294 68556378 -34938596 + LTR80B LTR ERVL 168 263 -321 8 1108 2355 149 82 0 chr15 68556378 68556767 -34938207 - MTC LTR MaLR 0 421 1 8 1108 420 306 119 45 chr15 68556767 68556925 -34938049 + LTR80B LTR ERVL 264 428 -156 8 1108 180 0 0 0 chr15 68557270 68557290 -34937684 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 8 1108 22 35 0 0 chr15 68557862 68557891 -34937083 + AT_rich Low_complexity Low_complexity 1 29 0 8 1108 36 0 0 0 chr15 68558184 68558220 -34936754 + AT_rich Low_complexity Low_complexity 1 36 0 8 1108 220 351 118 3 chr15 68558295 68558491 -34936483 + MIRb SINE MIR 14 245 -23 8 1108 325 331 53 7 chr15 68558549 68558701 -34936273 + L1M5 LINE L1 5627 5785 -339 9 1108 2269 107 17 20 chr15 68558774 68559126 -34935848 + L1Md_F2 LINE L1 6218 6568 -14 9 1108 473 183 0 35 chr15 68559385 68559470 -34935504 - B1_Mus2 SINE Alu -2 145 64 9 1108 753 273 77 26 chr15 68559502 68559735 -34935239 + Lx8 LINE L1 6205 6449 -1024 9 1108 439 239 43 34 chr15 68559743 68559860 -34935114 - RLTR14 LTR ERV1 -14 368 251 9 1108 2558 300 56 14 chr15 68560142 68561123 -34933851 + Lx8 LINE L1 6447 7468 -5 9 1108 189 121 0 0 chr15 68561261 68561294 -34933680 + (T)n Simple_repeat Simple_repeat 1 33 0 9 1108 195 42 0 0 chr15 68563184 68563208 -34931766 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1108 508 303 131 55 chr15 68563472 68563800 -34931174 + ORR1E LTR MaLR 1 353 -6 9 1108 745 177 216 0 chr15 68564059 68564240 -34930734 - URR1A DNA MER1_type -1 225 6 9 1108 223 309 142 23 chr15 68564714 68564843 -34930131 + MIRb SINE MIR 16 159 -109 9 1108 210 37 0 0 chr15 68565009 68565036 -34929938 + (TTG)n Simple_repeat Simple_repeat 2 28 0 1 1108 211 281 47 0 chr15 68566208 68566272 -34928702 - MIRc SINE MIR -39 229 163 1 1108 362 336 92 60 chr15 68567318 68567653 -34927321 + L2 LINE L2 1170 1515 -1904 1 1108 343 355 57 0 chr15 68568430 68568675 -34926299 + ERVL-E-int LTR ERVL 4660 4918 -749 1 1108 225 358 60 0 chr15 68569172 68569239 -34925735 + MLT1G LTR MaLR 202 272 -319 1 1108 805 221 6 0 chr15 68569423 68569581 -34925393 + B3A SINE B2 2 160 -38 1 1108 348 224 18 36 chr15 68569711 68569822 -34925152 - L1MA5 LINE L1 -23 6277 6169 1 1108 661 224 109 5 chr15 68569822 68570015 -34924959 - L1MA5 LINE L1 -17 6283 6071 1 1108 323 248 126 18 chr15 68571205 68571316 -34923658 + MER103 DNA DNA 38 160 -6 1 1108 545 307 115 19 chr15 68571702 68571804 -34923170 - Lx8 LINE L1 -2 7471 7344 1 1108 234 0 0 0 chr15 68571804 68571830 -34923144 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 1108 243 61 0 0 chr15 68571830 68571862 -34923112 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 1 1108 545 318 102 17 chr15 68571862 68572158 -34922816 - Lx8 LINE L1 -130 7343 7025 1 1108 916 37 0 113 chr15 68572212 68572363 -34922611 + L1Md_F3 LINE L1 6439 6572 -12 1 1108 288 77 0 0 chr15 68572400 68572439 -34922535 + (TTTTC)n Simple_repeat Simple_repeat 1 39 0 1 1108 243 357 85 71 chr15 68572598 68572809 -34922165 + ORR1E LTR MaLR 36 249 -110 1 1108 271 319 48 41 chr15 68573486 68573633 -34921341 - B1F2 SINE Alu 0 149 2 1 1108 394 309 9 18 chr15 68573711 68573823 -34921151 + Tigger5 DNA MER2_type 96 206 -2200 1 1108 207 0 0 0 chr15 68573895 68573918 -34921056 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1108 1138 44 0 7 chr15 68573918 68574056 -34920918 - B1_Mm SINE Alu -10 137 1 1 1108 576 229 37 30 chr15 68574375 68574500 -34920474 + B1_Mur2 SINE Alu 6 132 -17 1 1108 374 38 0 19 chr15 68574500 68574553 -34920421 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 1 1108 426 39 0 0 chr15 68574781 68574833 -34920141 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1108 994 86 177 0 chr15 68575917 68576103 -34918871 + Lx3_Mus LINE L1 6791 7009 0 1 1108 361 224 104 74 chr15 68576322 68576457 -34918517 - MLT1A1 LTR MaLR -2 406 268 1 1108 636 224 21 28 chr15 68576715 68576863 -34918111 + MTEb LTR MaLR 3 149 -230 1 1108 929 266 29 33 chr15 68576897 68577138 -34917836 + MTEb LTR MaLR 139 378 -1 1 1108 7167 78 5 1 chr15 68578729 68580336 -34914638 + L1_Mus1 LINE L1 4954 6567 0 1 1108 456 104 0 0 chr15 68581158 68581225 -34913749 + (CAGA)n Simple_repeat Simple_repeat 4 70 0 1 1108 279 227 0 14 chr15 68582368 68582462 -34912512 + L1MEd LINE L1 964 1059 -5166 1 1108 386 291 24 37 chr15 68583745 68583909 -34911065 - HAL1-2a_MD LINE L1 -517 2507 2346 1 1108 376 333 41 7 chr15 68583934 68584133 -34910841 - MIRb SINE MIR -39 223 2 1 1108 733 303 43 84 chr15 68584764 68585110 -34909864 - ORR1E LTR MaLR -19 340 9 1 1108 27 0 0 0 chr15 68585192 68585219 -34909755 + AT_rich Low_complexity Low_complexity 1 27 0 1 1108 569 53 0 0 chr15 68586632 68586707 -34908267 + L1_Mus2 LINE L1 6492 6566 0 1 1108 571 289 60 25 chr15 68587813 68588012 -34906962 - MT2A LTR ERVL -10 523 318 1 1108 277 152 0 0 chr15 68588041 68588087 -34906887 - MT2A LTR ERVL -487 46 1 1 1108 214 320 170 30 chr15 68588093 68588293 -34906681 + L2 LINE L2 2582 2809 -610 1 1108 210 317 37 104 chr15 68588393 68588527 -34906447 - B3 SINE B2 -27 189 65 1 1108 231 384 29 53 chr15 68591230 68591439 -34903535 - MIRm SINE MIR -2 274 71 1 1108 678 321 12 28 chr15 68591749 68591999 -34902975 + RMER15 LTR ERVL 328 573 -2 1 1108 1209 274 42 80 chr15 68592001 68592394 -34902580 + Lx9 LINE L1 6953 7342 -302 1 1108 378 0 0 0 chr15 68592394 68592436 -34902538 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 1108 1209 274 42 80 chr15 68592436 68592645 -34902329 + Lx9 LINE L1 7343 7531 -113 1 1108 238 289 39 135 chr15 68595258 68595362 -34899612 + B1F SINE Alu 30 123 -26 1 1108 374 234 13 0 chr15 68595288 68595365 -34899609 + ID_B1 SINE B4 127 204 -20 1 1108 393 349 19 0 chr15 68595391 68595497 -34899477 + B1_Mur2 SINE Alu 8 115 -34 1 1108 589 215 19 0 chr15 68595497 68595604 -34899370 + PB1D9 SINE Alu 2 110 -10 1 1108 26 30 0 0 chr15 68595925 68595958 -34899016 + AT_rich Low_complexity Low_complexity 1 33 0 1 1108 828 306 13 21 chr15 68596025 68596262 -34898712 + B4A SINE B4 1 235 -57 1 1108 315 0 0 0 chr15 68596320 68596355 -34898619 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1108 405 0 0 0 chr15 68596355 68596399 -34898575 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 1108 723 152 85 118 chr15 68596522 68596728 -34898246 + Lx9 LINE L1 7344 7520 -124 1 1108 441 0 0 0 chr15 68596728 68596777 -34898197 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 1108 723 152 85 118 chr15 68596777 68596875 -34898099 + Lx9 LINE L1 7521 7638 -6 1 1108 250 262 58 0 chr15 68596887 68596990 -34897984 + L1MEf LINE L1 1179 1287 -4955 1 1108 30838 89 14 1 chr15 68597049 68602410 -34892564 + L1Md_F2 LINE L1 152 5585 -298 1 1108 6935 100 9 17 chr15 68602411 68603415 -34891559 + L1Md_F2 LINE L1 5587 6582 0 1 1108 294 29 0 0 chr15 68603464 68603499 -34891475 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1108 255 305 87 31 chr15 68603592 68603883 -34891091 + L1MEf LINE L1 4618 4914 -1232 1 1108 390 85 0 0 chr15 68603941 68604000 -34890974 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 1108 252 303 85 36 chr15 68604049 68604330 -34890644 + L1MEf LINE L1 5067 5361 -785 1 1108 1074 214 70 7 chr15 68604427 68604697 -34890277 + RLTR20B2 LTR ERVK 1 298 -279 1 1108 733 93 0 0 chr15 68604700 68604797 -34890177 - Lx3_Mus LINE L1 -633 6376 6280 1 1108 4509 79 55 5 chr15 68604798 68605420 -34889554 + Lx3_Mus LINE L1 6347 6999 -10 1 1108 382 221 120 37 chr15 68605439 68605547 -34889427 + RLTR20B2 LTR ERVK 282 398 -165 1 1108 489 175 79 93 chr15 68605547 68605584 -34889390 - RLTR20B2 LTR ERVK -59 501 465 1 1108 405 0 0 0 chr15 68605584 68605629 -34889345 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1108 489 175 79 93 chr15 68605629 68605730 -34889244 - RLTR20B2 LTR ERVK -96 464 365 1 1108 6692 18 0 1 chr15 68605817 68606577 -34888397 + L1Md_T LINE L1 5823 6581 -1 1 1108 605 265 132 40 chr15 68606833 68607061 -34887913 - MLT1F1 LTR MaLR 0 569 321 1 1108 444 264 114 74 chr15 68607057 68607233 -34887741 + MLT1F LTR MaLR 108 290 -258 1 1108 417 197 47 81 chr15 68607237 68607386 -34887588 + Lx9 LINE L1 6965 7108 -536 1 1108 522 31 0 0 chr15 68607386 68607450 -34887524 + (GA)n Simple_repeat Simple_repeat 2 65 0 1 1108 902 272 30 7 chr15 68607451 68607751 -34887223 + Lx9 LINE L1 7204 7510 -134 1 1108 240 330 217 11 chr15 68609755 68610022 -34884952 - MLT1F1 LTR MaLR -150 362 41 1 1108 447 19 0 0 chr15 68610280 68610332 -34884642 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 1108 216 253 46 46 chr15 68610657 68610744 -34884230 + GA-rich Low_complexity Low_complexity 2 88 0 1 1108 196 305 67 17 chr15 68610965 68611025 -34883949 + L2b LINE L2 3231 3293 -82 1 1108 902 276 77 42 chr15 68612904 68613241 -34881733 - ORR1E LTR MaLR -2 357 9 1 1108 375 73 0 0 chr15 68613380 68613435 -34881539 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1108 619 53 0 0 chr15 68613498 68613573 -34881401 - L1Md_F3 LINE L1 -759 5825 5751 1 1108 5539 25 10 0 chr15 68613573 68614182 -34880792 + L1Md_F3 LINE L1 5970 6584 0 1 1108 1606 281 26 19 chr15 68614182 68614495 -34880479 + Lx6 LINE L1 7007 7318 -142 1 1108 997 136 6 6 chr15 68614495 68614673 -34880301 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1 1108 1606 281 26 19 chr15 68614673 68614784 -34880190 + Lx6 LINE L1 7319 7434 -26 1 1108 4043 163 37 11 chr15 68614801 68615531 -34879443 - RMER6A LTR ERVK -7 749 1 1 1108 888 306 0 23 chr15 68615574 68615788 -34879186 - B4 SINE B4 -82 210 2 1 1108 576 42 0 0 chr15 68615950 68616021 -34878953 + (GGAA)n Simple_repeat Simple_repeat 3 73 0 1 1108 445 336 0 0 chr15 68616363 68616476 -34878498 + PB1D10 SINE Alu 3 115 -2 1 1108 493 313 112 0 chr15 68617018 68617197 -34877777 + MER20 DNA MER1_type 18 216 -3 1 1108 526 282 46 145 chr15 68617558 68617796 -34877178 + B4A SINE B4 2 217 -75 1 1108 405 39 0 0 chr15 68617796 68617847 -34877127 + (TC)n Simple_repeat Simple_repeat 1 51 0 1 1108 526 282 46 145 chr15 68617847 68617911 -34877063 + B4A SINE B4 218 273 -19 1 1108 1105 65 13 0 chr15 68618317 68618472 -34876502 + (GAAA)n Simple_repeat Simple_repeat 3 159 0 1 1108 493 193 24 24 chr15 68618622 68618792 -34876182 + (TATG)n Simple_repeat Simple_repeat 1 170 0 1 1108 3105 49 2 108 chr15 68618792 68619226 -34875748 + RLTR10 LTR ERVK 1 388 -2 1 1108 201 254 15 31 chr15 68619230 68619295 -34875679 + (TATG)n Simple_repeat Simple_repeat 1 64 0 1 1108 419 361 58 66 chr15 68619300 68619558 -34875416 - B4A SINE B4 0 292 37 1 1108 5165 87 6 7 chr15 68619574 68620246 -34874728 - L1_Mus3 LINE L1 0 6638 5968 1 1108 249 362 95 74 chr15 68620294 68620536 -34874438 - MIR SINE MIR -5 263 17 1 1108 1763 54 0 18 chr15 68620904 68621130 -34873844 - L1Md_F3 LINE L1 0 6584 6363 1 1108 1615 140 68 39 chr15 68621211 68621522 -34873452 + Lx LINE L1 6334 6653 -1 1 1108 182 260 14 0 chr15 68622301 68622374 -34872600 + (TGGA)n Simple_repeat Simple_repeat 1 74 0 1 1108 274 383 20 56 chr15 68623283 68623532 -34871442 + LTR16D2 LTR ERVL 325 564 -8 1 1108 352 131 14 14 chr15 68623721 68623791 -34871183 + (TATG)n Simple_repeat Simple_repeat 3 72 0 1 1108 295 295 0 0 chr15 68624275 68624336 -34870638 + ID4 SINE ID 19 79 -4 1 1108 381 198 0 0 chr15 68624336 68624422 -34870552 + (TGG)n Simple_repeat Simple_repeat 1 86 0 1 1108 182 200 75 0 chr15 68624763 68624803 -34870171 - L2b LINE L2 -4 3371 3329 1 1108 414 39 0 0 chr15 68624810 68624862 -34870112 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1108 485 301 14 0 chr15 68625222 68625365 -34869609 + MER5A1 DNA MER1_type 20 164 -2 1 1108 234 0 0 0 chr15 68626557 68626583 -34868391 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1108 243 0 0 0 chr15 68626583 68626609 -34868365 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 1108 506 108 0 12 chr15 68626616 68626700 -34868274 + (GGGA)n Simple_repeat Simple_repeat 4 86 0 1 1108 255 264 152 83 chr15 68627987 68628119 -34866855 + L2c LINE L2 3247 3387 0 1 1108 24 0 0 0 chr15 68628710 68628734 -34866240 + AT_rich Low_complexity Low_complexity 1 24 0 2 1108 23 0 0 0 chr15 68628788 68628811 -34866163 + AT_rich Low_complexity Low_complexity 1 23 0 2 1108 25 0 0 0 chr15 68629806 68629831 -34865143 + AT_rich Low_complexity Low_complexity 1 25 0 2 1108 2830 65 0 14 chr15 68631497 68631855 -34863119 - L1Md_F2 LINE L1 0 6582 6230 2 1108 312 288 106 41 chr15 68632822 68632945 -34862029 + MIR SINE MIR 21 151 -57 2 1108 6699 55 26 7 chr15 68633032 68633885 -34861089 - L1Md_F2 LINE L1 -8 6574 5706 2 1108 568 97 11 11 chr15 68635289 68635383 -34859591 + (TAGA)n Simple_repeat Simple_repeat 3 96 0 2 1108 351 60 0 0 chr15 68636264 68636314 -34858660 + (TAA)n Simple_repeat Simple_repeat 2 51 0 2 1108 766 255 206 23 chr15 68636805 68637106 -34857868 + ORR1D2 LTR MaLR 1 356 -14 2 1108 579 180 0 0 chr15 68637901 68638051 -34856923 + CT-rich Low_complexity Low_complexity 2 151 0 2 1108 454 274 69 60 chr15 68638312 68638587 -34856387 - MTEa LTR MaLR -2 377 77 2 1108 386 94 0 0 chr15 68638939 68638992 -34855982 + Lx2B LINE L1 5878 5930 -1070 2 1108 248 304 87 50 chr15 68639428 68639670 -34855304 + L1MC4a LINE L1 5683 5933 -1949 2 1108 376 326 87 43 chr15 68639977 68640253 -34854721 - B4A SINE B4 0 292 5 2 1108 351 346 110 51 chr15 68640387 68640913 -34854061 - MLT1G1 LTR MaLR -16 608 1 2 1108 370 349 24 0 chr15 68642375 68642501 -34852473 - MTEa LTR MaLR -246 133 5 2 1108 1133 252 192 6 chr15 68642502 68642746 -34852228 + Lx9 LINE L1 7212 7513 -131 2 1108 314 98 20 0 chr15 68642746 68642797 -34852177 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1108 1133 252 192 6 chr15 68642797 68642911 -34852063 + Lx9 LINE L1 7514 7636 -8 2 1108 1897 68 0 17 chr15 68643205 68643445 -34851529 + L1_Mus1 LINE L1 6330 6565 -2 2 1108 347 0 23 0 chr15 68644885 68644928 -34850046 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 2 1108 1103 303 3 40 chr15 68645824 68646126 -34848848 + B4A SINE B4 1 291 -1 2 1108 189 132 0 0 chr15 68646390 68646428 -34848546 + (T)n Simple_repeat Simple_repeat 1 38 0 2 1108 183 42 0 0 chr15 68647226 68647250 -34847724 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1108 235 261 15 0 chr15 68648046 68648111 -34846863 + L1M5 LINE L1 5488 5553 -611 2 1108 875 256 147 3 chr15 68648356 68648655 -34846319 + ORR1E LTR MaLR 1 370 0 2 1108 309 249 41 12 chr15 68648789 68648960 -34846014 + (TA)n Simple_repeat Simple_repeat 2 177 0 2 1108 699 321 45 26 chr15 68648981 68649250 -34845724 + B4A SINE B4 1 274 -18 2 1108 489 84 0 0 chr15 68649252 68649323 -34845651 + (CA)n Simple_repeat Simple_repeat 1 71 0 2 1108 426 301 140 0 chr15 68650075 68650218 -34844756 - MIR SINE MIR -36 226 64 2 1108 1012 256 72 95 chr15 68650871 68651259 -34843715 + MTE2a LTR MaLR 1 379 0 2 1108 363 271 133 17 chr15 68651259 68651379 -34843595 + MER45A DNA Tip100 39 172 -6 2 1108 233 345 62 18 chr15 68651411 68651523 -34843451 + L2b LINE L2 2934 3050 -325 2 1108 419 287 40 47 chr15 68651699 68651849 -34843125 - MLT1A1 LTR MaLR 0 408 260 2 1108 221 205 0 0 chr15 68651900 68651939 -34843035 + L2a LINE L2 3282 3320 -106 2 1108 815 218 62 98 chr15 68651976 68652200 -34842774 - B3 SINE B2 0 216 1 2 1108 223 291 126 40 chr15 68653315 68653483 -34841491 + MIRb SINE MIR 17 203 -65 2 1108 209 226 21 31 chr15 68653498 68653594 -34841380 + (TTATA)n Simple_repeat Simple_repeat 2 96 0 2 1108 797 283 9 36 chr15 68653740 68653960 -34841014 + B3 SINE B2 3 216 0 2 1108 1956 149 125 3 chr15 68654090 68654427 -34840547 + ORR1C1 LTR MaLR 1 378 0 2 1108 205 333 50 42 chr15 68654485 68654604 -34840370 - MIR3 SINE MIR -28 180 61 2 1108 182 350 0 0 chr15 68654710 68654770 -34840204 - L2b LINE L2 -8 3367 3308 2 1108 618 295 44 29 chr15 68654797 68655003 -34839971 - B3 SINE B2 -6 210 2 2 1108 1847 115 63 0 chr15 68657671 68657957 -34837017 - Lx2 LINE L1 -2 6995 6692 2 1108 711 210 6 14 chr15 68657957 68658126 -34836848 + Lx2 LINE L1 6567 6733 -243 2 1108 494 378 77 28 chr15 68658276 68658961 -34836013 - ERVL-B4-int LTR ERVL -2065 3649 2931 2 1108 1929 247 57 16 chr15 68659056 68659562 -34835412 + RLTR11A2 LTR ERVK 1 527 0 2 1108 323 208 240 0 chr15 68659639 68659735 -34835239 + LTR48 LTR ERV1 37 155 -632 2 1108 192 40 0 0 chr15 68660357 68660382 -34834592 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 1108 209 267 83 0 chr15 68661302 68661362 -34833612 + MIR SINE MIR 35 99 -163 2 1108 729 299 125 65 chr15 68661362 68661795 -34833179 + MLT1C LTR MaLR 1 459 -8 2 1108 586 340 103 28 chr15 68662349 68662785 -34832189 - MLT1D LTR MaLR -13 492 24 2 1108 648 0 0 0 chr15 68663204 68663276 -34831698 + (TC)n Simple_repeat Simple_repeat 2 73 0 2 1108 1933 206 44 15 chr15 68663362 68663767 -34831207 + MTC LTR MaLR 1 417 -4 2 1108 267 301 84 0 chr15 68663793 68663876 -34831098 - RSINE1 SINE B4 -61 104 15 2 1108 1481 229 12 134 chr15 68664532 68664941 -34830033 - ORR1B2 LTR MaLR -8 359 1 2 1108 507 45 0 0 chr15 68664967 68665033 -34829941 + (GGGA)n Simple_repeat Simple_repeat 4 69 0 2 1108 434 136 12 0 chr15 68665033 68665114 -34829860 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 2 1108 242 316 0 60 chr15 68665750 68665834 -34829140 + MER81 DNA AcHobo 2 80 -34 2 1108 459 0 0 0 chr15 68666104 68666155 -34828819 + (TTA)n Simple_repeat Simple_repeat 1 51 0 2 1108 6268 139 26 16 chr15 68666160 68667096 -34827878 - Lx4A LINE L1 -1 7057 6113 2 1108 884 310 66 16 chr15 68668203 68668567 -34826407 - MLT1B LTR MaLR -7 383 2 2 1108 22 56 0 0 chr15 68668958 68668994 -34825980 + AT_rich Low_complexity Low_complexity 1 36 0 2 1108 310 235 11 69 chr15 68669059 68669146 -34825828 - ID4_ SINE ID 0 83 2 2 1108 1699 164 3 112 chr15 68670613 68670784 -34824190 - ORR1A4 LTR MaLR -8 321 153 2 1108 1366 82 11 32 chr15 68670784 68670973 -34824001 - B2_Mm2 SINE B2 -9 186 2 2 1108 1699 164 3 112 chr15 68670973 68671159 -34823815 - ORR1A4 LTR MaLR -177 152 3 2 1108 651 67 0 0 chr15 68672006 68672095 -34822879 + (TG)n Simple_repeat Simple_repeat 1 89 0 2 1108 23 33 0 0 chr15 68672490 68672520 -34822454 + AT_rich Low_complexity Low_complexity 1 30 0 2 1108 191 204 19 0 chr15 68673497 68673551 -34821423 + (TATG)n Simple_repeat Simple_repeat 4 58 0 2 1108 1001 308 48 4 chr15 68673575 68673823 -34821151 - B4A SINE B4 0 292 34 2 1108 302 355 24 18 chr15 68673988 68674045 -34820929 + MLT1B LTR MaLR 107 165 -225 2 1108 1131 98 0 0 chr15 68674045 68674208 -34820766 + (GGAA)n Simple_repeat Simple_repeat 3 165 0 2 1108 302 355 24 18 chr15 68674208 68674319 -34820655 + MLT1B LTR MaLR 166 275 -115 2 1108 385 312 101 8 chr15 68676956 68677085 -34817889 + ID_B1 SINE B4 81 221 -3 2 1108 8465 38 2 12 chr15 68677590 68678568 -34816406 + L1Md_F2 LINE L1 5615 6582 0 2 1108 439 253 0 0 chr15 68679142 68679237 -34815737 + MTE2b LTR MaLR 19 113 -266 2 1108 21 0 0 0 chr15 68679619 68679640 -34815334 + AT_rich Low_complexity Low_complexity 1 21 0 2 138 6688 7 0 0 chr15 68681107 68681805 -34813169 + L1Md_T LINE L1 5885 6582 0 2 1109 1153 170 92 5 chr15 68681891 68682098 -34812876 - URR1A DNA MER1_type -1 225 1 2 1109 4133 38 6 4 chr15 68682430 68682903 -34812071 + L1Md_F2 LINE L1 6101 6574 -8 2 1109 229 180 40 0 chr15 68683686 68683736 -34811238 + (TCTG)n Simple_repeat Simple_repeat 1 52 0 2 1109 576 0 0 0 chr15 68684483 68684547 -34810427 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 1109 286 152 0 0 chr15 68684551 68684597 -34810377 - MLT2C2 LTR ERVL 0 559 514 2 1109 745 298 28 0 chr15 68684622 68684800 -34810174 + B3A SINE B2 5 187 -11 2 1109 817 308 92 38 chr15 68684897 68685319 -34809655 - MT2A LTR ERVL -84 449 5 2 1109 576 239 106 25 chr15 68685906 68686012 -34808962 - Lx9 LINE L1 -5 7639 7526 2 1109 450 53 0 0 chr15 68686012 68686069 -34808905 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1109 423 0 0 0 chr15 68686069 68686115 -34808859 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 1109 576 239 106 25 chr15 68686115 68686243 -34808731 - Lx9 LINE L1 -119 7525 7386 2 1109 1129 304 10 41 chr15 68686769 68687163 -34807811 - Lx8 LINE L1 -388 7085 6704 2 1109 22 0 0 0 chr15 68687168 68687190 -34807784 + AT_rich Low_complexity Low_complexity 1 22 0 2 1109 757 308 8 45 chr15 68688531 68688773 -34806201 - B4A SINE B4 -10 282 48 2 1109 258 200 0 20 chr15 68688909 68688960 -34806014 - B4A SINE B4 -238 54 5 2 1109 479 308 161 12 chr15 68689177 68689377 -34805597 + B4A SINE B4 2 217 -75 2 1109 351 0 0 0 chr15 68689377 68689416 -34805558 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2 1109 479 308 161 12 chr15 68689416 68689458 -34805516 + B4A SINE B4 218 279 -13 2 1109 206 312 10 41 chr15 68689700 68689797 -34805177 + A-rich Low_complexity Low_complexity 3 96 0 2 1109 310 100 43 22 chr15 68690087 68690179 -34804795 + A-rich Low_complexity Low_complexity 3 96 0 2 1109 520 363 94 50 chr15 68690439 68690949 -34804025 + MLT1G1 LTR MaLR 1 575 -4 2 1109 1703 216 41 17 chr15 68691344 68691706 -34803268 - ORR1D1 LTR MaLR 0 374 4 2 1109 360 351 46 23 chr15 68692574 68692749 -34802225 - MIRb SINE MIR -76 192 14 2 1109 385 252 38 28 chr15 68693070 68693176 -34801798 - PB1D10 SINE Alu -10 107 1 2 1109 243 338 43 22 chr15 68693176 68693306 -34801668 + L3 LINE CR1 4344 4476 -13 2 1109 22 0 0 0 chr15 68694160 68694182 -34800792 + AT_rich Low_complexity Low_complexity 1 22 0 2 1109 183 111 45 45 chr15 68694212 68694278 -34800696 + T-rich Low_complexity Low_complexity 1 66 0 3 1109 306 333 0 24 chr15 68694420 68694503 -34800471 - ID4 SINE ID 0 83 3 3 1109 543 31 0 0 chr15 68694506 68694571 -34800403 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 1109 279 0 0 0 chr15 68694571 68694601 -34800373 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1109 213 300 14 0 chr15 68694636 68694706 -34800268 + GA-rich Low_complexity Low_complexity 1 71 0 3 1109 251 157 20 0 chr15 68699094 68699145 -34795829 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1109 207 195 24 0 chr15 68700638 68700679 -34794295 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1109 739 324 14 65 chr15 68700686 68700963 -34794011 - B4A SINE B4 -3 289 27 3 1109 380 20 20 0 chr15 68701032 68701081 -34793893 + (TTG)n Simple_repeat Simple_repeat 2 51 0 3 1109 369 58 2 0 chr15 68701081 68701132 -34793842 - B1_Mur4 SINE Alu -8 142 61 3 1109 767 294 106 39 chr15 68701209 68701718 -34793256 - L1MB7 LINE L1 -161 6023 5481 3 1109 282 271 52 0 chr15 68702164 68702260 -34792714 + Lx7 LINE L1 6066 6166 -1530 3 1109 213 65 0 0 chr15 68702267 68702298 -34792676 + (TCTCTG)n Simple_repeat Simple_repeat 4 34 0 3 1109 375 78 0 0 chr15 68702319 68702370 -34792604 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1109 388 306 27 14 chr15 68702858 68703004 -34791970 + MIR SINE MIR 90 237 -25 3 1109 185 132 0 26 chr15 68703009 68703048 -34791926 + (CAT)n Simple_repeat Simple_repeat 2 39 0 3 1109 796 303 106 40 chr15 68704400 68704873 -34790101 - L1MC3 LINE L1 -161 7624 7112 3 1109 450 0 0 0 chr15 68704873 68704923 -34790051 + (CTTG)n Simple_repeat Simple_repeat 1 50 0 3 1109 796 303 106 40 chr15 68704923 68705044 -34789930 - L1MC3 LINE L1 -674 7111 6992 3 1109 358 259 131 39 chr15 68705044 68705197 -34789777 - MTEb LTR MaLR -8 371 205 3 1109 313 316 162 0 chr15 68705214 68705331 -34789643 - MTEb LTR MaLR -223 136 1 3 1109 1426 274 55 8 chr15 68705331 68705704 -34789270 - MTEb-int LTR MaLR -53 1527 1136 3 1109 707 315 36 27 chr15 68705781 68706019 -34788955 - MTEb-int LTR MaLR -1353 227 12 3 1109 1550 296 59 92 chr15 68706122 68707087 -34787887 - L1MC LINE L1 -1788 4358 3426 3 1109 495 268 192 15 chr15 68708303 68708709 -34786265 - L1MC LINE L1 -2748 3398 2921 3 1109 717 370 145 28 chr15 68709402 68709762 -34785212 + MLT1J-int LTR MaLR 226 662 -725 3 1109 854 250 5 51 chr15 68709762 68709977 -34784997 + B3 SINE B2 1 205 -11 3 1109 717 370 145 28 chr15 68709977 68710335 -34784639 + MLT1J-int LTR MaLR 663 1028 -359 3 1109 1237 94 0 62 chr15 68710428 68710620 -34784354 - L1Md_F2 LINE L1 -1 6581 6402 3 1109 498 75 0 0 chr15 68710993 68711060 -34783914 + (CA)n Simple_repeat Simple_repeat 1 67 0 3 1109 341 264 44 35 chr15 68712104 68712218 -34782756 - L2a LINE L2 0 3426 3312 3 1109 248 286 35 12 chr15 68712502 68712587 -34782387 - L2a LINE L2 -541 2878 2792 3 1109 203 0 37 0 chr15 68714401 68714428 -34780546 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 1109 254 289 12 50 chr15 68715166 68715246 -34779728 + MLT1J1 LTR MaLR 366 442 -2 3 1109 247 188 21 0 chr15 68715253 68715316 -34779658 + MIRc SINE MIR 166 229 -39 3 1109 36239 35 0 0 chr15 68716315 68721740 -34773234 + L1Md_T LINE L1 68 5589 -297 3 1109 9477 10 0 0 chr15 68721740 68722735 -34772239 + L1Md_T LINE L1 5590 6584 -1 3 1109 1791 158 35 6 chr15 68723192 68723505 -34771469 - RLTR25B LTR ERVK -706 322 1 3 1109 801 276 115 33 chr15 68723507 68723897 -34771077 - Lx9 LINE L1 -271 7373 6952 3 1109 1180 221 12 79 chr15 68723925 68724254 -34770720 - L1_Rod LINE L1 0 5847 5541 3 1109 1473 219 109 19 chr15 68724755 68725123 -34769851 + MTD LTR MaLR 4 404 -15 3 1109 289 306 97 16 chr15 68726495 68726623 -34768351 - MLT1H1 LTR MaLR -373 196 55 3 1109 675 307 123 18 chr15 68726627 68726969 -34768005 - MLT1A1 LTR MaLR -30 378 1 3 1109 385 298 35 46 chr15 68729615 68729812 -34765162 - MLT1D LTR MaLR -283 222 28 3 1109 342 0 0 0 chr15 68729871 68729909 -34765065 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1109 206 193 18 0 chr15 68729944 68730001 -34764973 + (TATG)n Simple_repeat Simple_repeat 2 59 0 3 1109 547 317 4 93 chr15 68730053 68730279 -34764695 - B4 SINE B4 -4 288 83 3 1109 496 222 68 45 chr15 68730292 68730424 -34764550 + B1F2 SINE Alu 13 147 -2 3 1109 266 316 0 9 chr15 68730569 68730684 -34764290 + MLT2D LTR ERVL 10 123 -291 3 1109 953 189 5 32 chr15 68730684 68730870 -34764104 + ORR1D1 LTR MaLR 1 181 -193 3 1109 1017 86 0 0 chr15 68730896 68731059 -34763915 + (TC)n Simple_repeat Simple_repeat 2 164 0 3 1109 234 349 116 35 chr15 68731116 68731315 -34763659 + MLT2D LTR ERVL 169 383 -14 3 1109 232 288 0 0 chr15 68731809 68731875 -34763099 - MIRb SINE MIR -67 201 136 3 1109 695 330 70 11 chr15 68734520 68734995 -34759979 + MLT2B2 LTR ERVL 1 510 -5 3 1109 285 0 43 22 chr15 68735255 68735301 -34759673 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 3 1109 183 261 62 0 chr15 68735403 68735468 -34759506 - L2b LINE L2 -1 3374 3306 3 1109 297 364 86 66 chr15 68736336 68736533 -34758441 - MER115 DNA Tip100 -376 317 117 3 1109 180 322 219 41 chr15 68736627 68736750 -34758224 - MIR SINE MIR -115 147 3 3 1109 180 0 0 0 chr15 68736926 68736946 -34758028 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 1109 21 0 0 0 chr15 68737581 68737602 -34757372 + AT_rich Low_complexity Low_complexity 1 21 0 3 1109 405 0 0 0 chr15 68737936 68737981 -34756993 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1109 225 240 0 39 chr15 68739116 68739220 -34755754 + GA-rich Low_complexity Low_complexity 2 101 0 3 1109 305 125 18 0 chr15 68739419 68739475 -34755499 + (TCCC)n Simple_repeat Simple_repeat 2 58 0 3 1109 835 167 20 55 chr15 68739954 68740100 -34754874 + B1_Mur2 SINE Alu 2 142 -7 3 1109 547 291 58 52 chr15 68740996 68741170 -34753804 - B3A SINE B2 -1 215 41 3 1109 1559 227 60 30 chr15 68741213 68741351 -34753623 + RLTR11A LTR ERVK 77 228 -300 3 1109 1200 111 0 0 chr15 68741351 68741531 -34753443 + (GGA)n Simple_repeat Simple_repeat 1 180 0 3 1109 1559 227 60 30 chr15 68741531 68741823 -34753151 + RLTR11A LTR ERVK 229 520 -8 3 1109 1685 210 111 3 chr15 68741891 68742244 -34752730 + Lx7 LINE L1 6418 6808 -888 3 1109 525 228 89 7 chr15 68742273 68742419 -34752555 + ORR1D1 LTR MaLR 1 158 -216 3 1109 459 0 0 0 chr15 68742432 68742483 -34752491 + (TTG)n Simple_repeat Simple_repeat 2 52 0 3 1109 666 148 0 0 chr15 68742481 68742596 -34752378 + (TTC)n Simple_repeat Simple_repeat 3 117 0 3 1109 313 192 933 17 chr15 68742615 68742719 -34752255 + ORR1D1 LTR MaLR 169 367 0 3 1109 288 0 0 0 chr15 68742939 68742971 -34752003 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1109 426 20 0 0 chr15 68742971 68743022 -34751952 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 1109 737 261 44 48 chr15 68743713 68744006 -34750968 - MTEa LTR MaLR -7 372 1 3 1109 253 360 0 0 chr15 68744331 68744406 -34750568 + B4 SINE B4 1 75 -217 3 1109 712 132 16 0 chr15 68744432 68744561 -34750413 + (TCTA)n Simple_repeat Simple_repeat 2 132 0 3 1109 396 264 36 45 chr15 68744561 68744672 -34750302 - ID_B1 SINE B4 -17 207 98 3 1109 1238 127 11 0 chr15 68744692 68744881 -34750093 - B2_Mm1t SINE B2 -1 192 2 3 1109 329 324 70 28 chr15 68745074 68745217 -34749757 - MIRb SINE MIR -47 221 73 3 1109 231 306 0 0 chr15 68745206 68745268 -34749706 + L2c LINE L2 3254 3315 -72 3 1109 546 211 10 43 chr15 68745426 68745588 -34749386 - B3 SINE B2 -8 185 36 3 1109 504 32 0 0 chr15 68745671 68745733 -34749241 + (TG)n Simple_repeat Simple_repeat 2 63 0 3 1109 201 304 0 0 chr15 68745780 68745836 -34749138 + (CATG)n Simple_repeat Simple_repeat 1 56 0 3 1109 1283 212 156 0 chr15 68747012 68747332 -34747642 + ORR1D2 LTR MaLR 1 370 0 3 1109 219 315 52 35 chr15 68749007 68749122 -34745852 - MIRb SINE MIR -17 251 135 3 1109 2701 214 63 2 chr15 68749340 68750039 -34744935 + Lx4B LINE L1 6218 6981 -19 3 1109 1291 217 122 61 chr15 68751522 68751915 -34743059 + MTD LTR MaLR 1 417 -2 3 1109 274 282 76 52 chr15 68752303 68752475 -34742499 + Charlie5 DNA MER1_type 1 176 -2448 3 1109 308 286 138 19 chr15 68752496 68752706 -34742268 + Charlie5 DNA MER1_type 2369 2603 -21 3 1109 772 259 16 21 chr15 68753472 68753688 -34741286 - B3A SINE B2 0 216 1 3 1109 573 123 9 62 chr15 68754150 68754263 -34740711 - B1_Mm SINE Alu -40 107 1 3 1109 225 307 8 42 chr15 68754469 68754588 -34740386 + CT-rich Low_complexity Low_complexity 4 118 0 3 1109 216 253 48 95 chr15 68757578 68757683 -34737291 - MIR SINE MIR -87 175 76 3 1109 232 183 87 106 chr15 68758506 68758610 -34736364 + MIRm SINE MIR 34 135 -141 3 1109 257 248 47 27 chr15 68758745 68758894 -34736080 + (CGCGG)n Simple_repeat Simple_repeat 4 155 0 3 1109 290 204 53 11 chr15 68758784 68758878 -34736096 + (CGGGG)n Simple_repeat Simple_repeat 5 102 0 3 1109 75 62 0 18 chr15 68759008 68759172 -34735802 + GC_rich Low_complexity Low_complexity 1 161 0 3 1109 180 97 0 0 chr15 68761042 68761073 -34733901 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1109 189 0 0 0 chr15 68763116 68763137 -34731837 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 3 1109 21 0 0 0 chr15 68764421 68764442 -34730532 + AT_rich Low_complexity Low_complexity 1 21 0 3 1109 690 13 0 0 chr15 68764556 68764635 -34730339 + (TCCC)n Simple_repeat Simple_repeat 4 82 0 3 1109 689 168 7 87 chr15 68764648 68764798 -34730176 - B1_Mur1 SINE Alu 0 149 12 3 1109 630 37 0 0 chr15 68765113 68765194 -34729780 + (TG)n Simple_repeat Simple_repeat 1 81 0 3 1109 4698 49 2 7 chr15 68765297 68765870 -34729104 + L1_Mus1 LINE L1 5998 6567 0 3 1109 206 193 0 17 chr15 68766314 68766372 -34728602 + GA-rich Low_complexity Low_complexity 4 60 0 3 1109 822 151 7 20 chr15 68766561 68766710 -34728264 + B1_Mus1 SINE Alu 2 148 0 3 1109 269 314 46 79 chr15 68766574 68766726 -34728248 + B4A SINE B4 99 245 -47 3 1109 372 94 0 0 chr15 68766729 68766782 -34728192 + (GGGAA)n Simple_repeat Simple_repeat 4 56 0 3 1109 213 214 71 0 chr15 68766787 68766843 -34728131 - MIRc SINE MIR -120 148 89 3 1109 182 348 58 29 chr15 68768063 68768202 -34726772 - MIRb SINE MIR -21 247 105 3 1109 428 276 149 6 chr15 68769353 68769521 -34725453 - B3A SINE B2 -6 192 1 4 1109 256 285 75 103 chr15 68770369 68770823 -34724151 - L1MC4 LINE L1 -669 7373 6933 4 1109 268 300 22 30 chr15 68770991 68771125 -34723849 + MER2 DNA MER2_type 170 302 -43 4 1109 260 27 27 0 chr15 68771799 68771836 -34723138 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1109 745 292 59 0 chr15 68771855 68772108 -34722866 - B4A SINE B4 -22 270 3 4 1109 417 280 37 6 chr15 68772912 68773057 -34721917 - B1F1 SINE Alu -1 146 6 4 1109 281 309 130 14 chr15 68773687 68773910 -34721064 - L2c LINE L2 -38 3349 3101 4 1109 180 0 0 0 chr15 68775080 68775100 -34719874 + (TATG)n Simple_repeat Simple_repeat 2 21 0 4 1109 262 308 64 18 chr15 68775613 68775722 -34719252 - MLT1A1 LTR MaLR 0 408 295 4 1109 182 62 0 30 chr15 68776149 68776182 -34718792 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 4 1109 1163 75 0 0 chr15 68776185 68776332 -34718642 - B1_Mus2 SINE Alu 0 147 1 4 1109 259 343 121 6 chr15 68776787 68776969 -34718005 - MLT1A1 LTR MaLR -302 203 1 4 1109 222 344 11 21 chr15 68778225 68778320 -34716654 - MIRb SINE MIR -66 202 109 4 1109 216 0 0 0 chr15 68778488 68778512 -34716462 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1109 260 306 96 45 chr15 68779430 68779647 -34715327 + MIR SINE MIR 41 257 -11 4 1109 185 154 0 25 chr15 68780532 68780572 -34714402 + C-rich Low_complexity Low_complexity 1 39 0 4 1109 441 0 0 0 chr15 68782515 68782564 -34712410 + (TTA)n Simple_repeat Simple_repeat 1 49 0 4 1109 792 0 0 0 chr15 68782810 68782898 -34712076 + (TTTCC)n Simple_repeat Simple_repeat 3 90 0 4 1109 703 286 119 13 chr15 68783047 68783494 -34711480 - L1MD LINE L1 -3033 3113 2620 4 1109 271 248 20 0 chr15 68783561 68783662 -34711312 + MER58B DNA MER1_type 120 222 -119 4 1109 24 0 0 0 chr15 68784113 68784137 -34710837 + AT_rich Low_complexity Low_complexity 1 24 0 4 1109 210 118 0 0 chr15 68784538 68784572 -34710402 + (ATG)n Simple_repeat Simple_repeat 1 34 0 4 1109 550 305 62 41 chr15 68784595 68784934 -34710040 + Charlie1a DNA MER1_type 95 440 -1015 4 1109 248 284 15 0 chr15 68785345 68785412 -34709562 + ID4 SINE ID 12 79 -4 4 1109 546 146 0 0 chr15 68786164 68786274 -34708700 + (TG)n Simple_repeat Simple_repeat 1 110 0 4 1109 616 243 80 40 chr15 68786282 68786458 -34708516 - B4A SINE B4 0 292 110 4 1109 819 139 0 0 chr15 68786836 68787016 -34707958 + (TC)n Simple_repeat Simple_repeat 1 180 0 4 1109 271 267 75 0 chr15 68787060 68787180 -34707794 - L1_Mur2 LINE L1 -2270 3607 3479 4 1109 529 255 56 14 chr15 68787418 68787561 -34707413 - B1F SINE Alu 0 149 1 4 1109 605 250 6 52 chr15 68787590 68787763 -34707211 - B3A SINE B2 -33 165 1 4 1109 271 312 223 11 chr15 68788120 68788492 -34706482 - L1MCc LINE L1 -5954 469 19 4 1109 1326 71 4 0 chr15 68788934 68789160 -34705814 + (TTTC)n Simple_repeat Simple_repeat 1 226 0 4 1109 315 212 0 0 chr15 68789397 68789477 -34705497 + (TG)n Simple_repeat Simple_repeat 2 81 0 4 1109 365 200 58 29 chr15 68790262 68790365 -34704609 + B3 SINE B2 109 214 -2 4 1109 288 0 0 0 chr15 68790463 68790495 -34704479 + (CAT)n Simple_repeat Simple_repeat 2 33 0 4 1109 603 108 11 0 chr15 68790531 68790624 -34704350 - B1_Mus2 SINE Alu -7 140 47 4 1109 459 136 0 47 chr15 68791010 68791095 -34703879 - Lx3C LINE L1 -463 6513 6433 4 1109 524 77 0 13 chr15 68791101 68791180 -34703794 + (GA)n Simple_repeat Simple_repeat 1 78 0 4 1109 522 176 57 57 chr15 68791180 68791337 -34703637 + Lx3C LINE L1 6820 6976 0 4 1109 1531 198 60 24 chr15 68791761 68792143 -34702831 - RMER5 LTR ERV1 -126 408 13 4 1109 531 56 0 0 chr15 68792613 68792684 -34702290 + (TG)n Simple_repeat Simple_repeat 1 71 0 4 1109 441 211 0 0 chr15 68792856 68792989 -34701985 + (TG)n Simple_repeat Simple_repeat 2 134 0 4 1109 305 91 0 0 chr15 68793018 68793062 -34701912 - HAL1-3A_ME LINE L1 -840 2018 1975 4 1109 1570 134 363 32 chr15 68795892 68796326 -34698648 - RMER4B LTR ERVK -8 577 1 4 1109 2673 272 114 22 chr15 68796831 68797803 -34697171 - Lx8 LINE L1 -77 7396 6335 4 1109 590 47 12 0 chr15 68799253 68799338 -34695636 - L1Md_F2 LINE L1 0 6582 6497 4 1109 8205 42 10 0 chr15 68799963 68801145 -34693829 - L1Md_F3 LINE L1 -14 6570 5377 4 1109 1398 262 89 24 chr15 68801540 68801998 -34692976 - RMER20A LTR ERVK 0 516 29 4 1109 369 0 0 0 chr15 68803658 68803699 -34691275 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1109 203 292 0 0 chr15 68805305 68805353 -34689621 + (CG)n Simple_repeat Simple_repeat 2 49 0 4 1109 262 232 122 54 chr15 68805460 68805655 -34689319 + L1M2 LINE L1 5571 5788 -512 4 1109 360 0 0 0 chr15 68805826 68805866 -34689108 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1109 279 259 94 43 chr15 68806419 68806536 -34688438 + B1_Mur1 SINE Alu 1 123 -26 4 1109 1844 146 15 56 chr15 68807946 68808286 -34686688 - ORR1A3 LTR MaLR 0 326 1 4 1109 294 115 0 3 chr15 68808801 68808855 -34686119 - MT2A LTR ERVL 0 533 488 4 1109 656 249 162 34 chr15 68808893 68809288 -34685686 - MT2A LTR ERVL -142 459 3 4 1109 4910 172 63 68 chr15 68809288 68810344 -34684630 - MERVL_2A-int LTR ERVL -1 5760 4710 4 138 38733 30 1 0 chr15 68810349 68816988 -34677986 - L1Md_T LINE L1 0 6585 1 4 1110 1885 196 12 3 chr15 68816990 68817323 -34677651 - MERVL_2A-int LTR ERVL -1040 4721 4386 4 1110 482 186 78 132 chr15 68817471 68817638 -34677336 - MERVL_2A-int LTR ERVL -3685 2076 1919 4 1110 389 242 89 65 chr15 68818485 68818653 -34676321 - RLTR14 LTR ERV1 -206 176 5 4 1110 731 257 14 19 chr15 68819676 68819890 -34675084 - B3 SINE B2 0 216 4 4 1110 441 0 0 0 chr15 68820159 68820208 -34674766 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1110 1694 31 0 0 chr15 68820948 68821141 -34673833 - B2_Mm1a SINE B2 0 193 1 4 1110 25 75 0 0 chr15 68821862 68821915 -34673059 + AT_rich Low_complexity Low_complexity 1 53 0 4 1110 255 31 0 0 chr15 68822066 68822098 -34672876 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1110 503 308 48 39 chr15 68822180 68822410 -34672564 + B4A SINE B4 2 233 -59 4 1110 210 71 0 0 chr15 68822509 68822537 -34672437 + (CATG)n Simple_repeat Simple_repeat 4 31 0 4 1110 2262 252 157 76 chr15 68822703 68823840 -34671134 - Lx8 LINE L1 -6 7467 6239 4 1110 369 0 0 0 chr15 68823858 68823899 -34671075 + (CAAG)n Simple_repeat Simple_repeat 2 42 0 4 1110 234 156 31 0 chr15 68825004 68825068 -34669906 - Lx9 LINE L1 -17 7627 7562 4 1110 261 135 0 0 chr15 68825190 68825242 -34669732 + (ATG)n Simple_repeat Simple_repeat 2 53 0 4 1110 329 285 27 62 chr15 68826778 68826924 -34668050 + MLT1A LTR MaLR 19 159 -215 4 1110 399 283 35 0 chr15 68827051 68827164 -34667810 + B4A SINE B4 161 277 -15 4 1110 315 0 0 0 chr15 68827443 68827478 -34667496 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 4 1110 464 291 88 28 chr15 68827616 68827867 -34667107 - L1MEf LINE L1 -1274 4872 4607 4 1110 25 0 0 0 chr15 68828662 68828687 -34666287 + AT_rich Low_complexity Low_complexity 1 25 0 4 1110 5894 164 23 24 chr15 68828875 68830024 -34664950 - L1_Mur2 LINE L1 -1308 4569 3423 4 1110 369 0 0 0 chr15 68830040 68830081 -34664893 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1110 257 330 101 5 chr15 68830102 68830300 -34664674 - B4 SINE B4 -10 282 66 4 1110 361 273 148 8 chr15 68830462 68830584 -34664390 - L1MEf LINE L1 -5534 708 570 4 1110 266 270 23 18 chr15 68830790 68830906 -34664068 - L1MEf LINE L1 -5909 227 118 4 1110 240 35 0 0 chr15 68831354 68831383 -34663591 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 1110 341 253 49 45 chr15 68832233 68832476 -34662498 - MER44A DNA MER2_type -77 262 7 4 1110 3317 33 0 0 chr15 68832921 68833310 -34661664 + L1Md_T LINE L1 6194 6582 0 4 1110 307 260 187 45 chr15 68833735 68834232 -34660742 - L1MA7 LINE L1 -44 6256 5660 4 1110 186 103 0 0 chr15 68834341 68834370 -34660604 + (CAGAG)n Simple_repeat Simple_repeat 5 33 0 4 1110 237 33 0 0 chr15 68835268 68835298 -34659676 + (TTA)n Simple_repeat Simple_repeat 2 31 0 4 1110 908 99 28 55 chr15 68836270 68836452 -34658522 - Lx LINE L1 0 6654 6478 4 1110 349 280 35 3 chr15 68837224 68837340 -34657634 + B3A SINE B2 1 120 -96 4 1110 525 16 0 0 chr15 68837802 68837864 -34657110 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 1110 189 0 0 0 chr15 68839631 68839652 -34655322 + (CTGTG)n Simple_repeat Simple_repeat 1 21 0 4 1110 396 40 0 0 chr15 68840419 68840469 -34654505 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1110 2242 341 51 40 chr15 68840715 68842344 -34652630 + Lx9 LINE L1 5725 7468 -176 4 1110 252 143 0 0 chr15 68842344 68842386 -34652588 + (TGGG)n Simple_repeat Simple_repeat 2 43 0 4 1110 22 0 0 0 chr15 68844240 68844262 -34650712 + AT_rich Low_complexity Low_complexity 1 22 0 4 1110 24 0 0 0 chr15 68844649 68844673 -34650301 + AT_rich Low_complexity Low_complexity 1 24 0 4 1110 527 0 16 0 chr15 68844927 68844990 -34649984 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 4 1110 298 347 73 29 chr15 68845593 68845839 -34649135 - ERVL-E-int LTR ERVL -1420 4247 3991 4 1110 281 230 0 10 chr15 68846125 68846226 -34648748 + GA-rich Low_complexity Low_complexity 2 101 0 4 1110 210 174 21 21 chr15 68846395 68846442 -34648532 + CT-rich Low_complexity Low_complexity 3 49 0 4 1110 332 238 48 19 chr15 68848681 68848784 -34646190 - L1M4 LINE L1 -1478 4668 4563 4 1110 896 153 14 0 chr15 68848879 68849023 -34645951 + B1_Mur4 SINE Alu 5 150 0 4 1110 327 104 0 0 chr15 68849023 68849071 -34645903 + (A)n Simple_repeat Simple_repeat 1 48 0 4 1110 977 209 56 5 chr15 68849135 68849332 -34645642 - B3 SINE B2 0 216 10 4 1110 23 0 0 0 chr15 68851421 68851444 -34643530 + AT_rich Low_complexity Low_complexity 1 23 0 4 1110 1939 66 0 30 chr15 68851444 68851708 -34643266 - L1_Mus1 LINE L1 -1 6566 6311 5 1110 415 303 65 19 chr15 68852075 68852230 -34642744 - RSINE1 SINE B4 0 165 4 5 1110 1359 89 21 5 chr15 68852390 68852581 -34642393 - B2_Mm2 SINE B2 -1 194 1 5 1110 216 228 18 0 chr15 68853978 68854035 -34640939 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 5 1110 331 180 33 0 chr15 68854059 68854120 -34640854 - B1F SINE Alu -42 107 45 5 1110 671 277 45 98 chr15 68854531 68854795 -34640179 + MTE2b LTR MaLR 5 254 -125 5 1110 21 36 0 0 chr15 68856832 68856860 -34638114 + AT_rich Low_complexity Low_complexity 1 28 0 5 1110 2215 59 3 14 chr15 68858543 68858835 -34636139 + L1Md_F2 LINE L1 6289 6577 -5 5 1110 245 289 0 46 chr15 68858970 68859057 -34635917 + ID_B1 SINE B4 134 216 -8 5 1110 419 171 0 38 chr15 68858988 68859067 -34635907 + B1_Mur1 SINE Alu 73 148 -1 5 1110 795 66 0 0 chr15 68862294 68862400 -34632574 + (TG)n Simple_repeat Simple_repeat 2 107 0 5 1110 328 299 21 0 chr15 68865412 68865509 -34629465 - RSINE1 SINE B4 -8 157 59 5 1110 1631 149 20 87 chr15 68865509 68866000 -34628974 - RMER17C LTR ERVK -519 439 16 5 1110 354 210 0 0 chr15 68865986 68866048 -34628926 - RSINE1 SINE B4 -102 63 2 5 1110 322 280 16 84 chr15 68867520 68867658 -34627316 - B1_Mur1 SINE Alu -20 128 1 5 1110 289 284 23 0 chr15 68870438 68870526 -34624448 - MER105 DNA DNA -72 132 43 5 1110 298 287 46 0 chr15 68870861 68870948 -34624026 + PB1D10 SINE Alu 16 106 -11 5 1110 351 0 0 0 chr15 68871399 68871438 -34623536 + (T)n Simple_repeat Simple_repeat 1 39 0 5 1110 237 163 0 0 chr15 68872950 68872999 -34621975 + G-rich Low_complexity Low_complexity 1 49 0 5 1110 517 239 80 0 chr15 68874574 68874712 -34620262 + ID_B1 SINE B4 75 223 -1 5 1110 357 82 0 0 chr15 68875463 68875512 -34619462 + (CAT)n Simple_repeat Simple_repeat 1 49 0 5 1110 1509 58 16 5 chr15 68876408 68876600 -34618374 - B2_Mm2 SINE B2 0 195 2 5 1110 711 276 0 42 chr15 68876656 68876845 -34618129 + B3A SINE B2 1 181 -17 5 1110 322 148 8 17 chr15 68877242 68877313 -34617661 + B1F2 SINE Alu 40 112 -8 5 1110 731 298 117 33 chr15 68877377 68877890 -34617084 - L1M4 LINE L1 -842 5802 5247 5 1110 634 296 180 21 chr15 68878365 68879025 -34615949 - L1M4 LINE L1 -4863 1679 915 5 1110 198 143 0 0 chr15 68879050 68879085 -34615889 + (TCC)n Simple_repeat Simple_repeat 3 37 0 5 1110 418 233 64 52 chr15 68879100 68879272 -34615702 - L1M4 LINE L1 -5778 764 591 5 1110 180 125 0 0 chr15 68881333 68881365 -34613609 + (TCTCCC)n Simple_repeat Simple_repeat 5 36 0 5 1110 204 40 0 0 chr15 68881444 68881469 -34613505 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 1110 2232 263 35 5 chr15 68881479 68882079 -34612895 - Lx7 LINE L1 -374 7322 6705 5 1110 3464 183 131 22 chr15 68882062 68882866 -34612108 - Lx9 LINE L1 -191 7453 6563 5 1110 15047 232 72 39 chr15 68882860 68884179 -34610795 - Lx7 LINE L1 -1037 6659 5254 5 1110 186 71 0 0 chr15 68884179 68884207 -34610767 + (TTG)n Simple_repeat Simple_repeat 1 28 0 5 1110 15047 219 81 55 chr15 68884207 68888676 -34606298 - Lx7 LINE L1 -627 5253 717 5 1110 387 268 92 117 chr15 68890031 68890280 -34604694 - MLT1B LTR MaLR -80 310 68 5 1110 435 38 0 0 chr15 68891845 68891898 -34603076 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1110 225 0 0 0 chr15 68892648 68892673 -34602301 + (ACCTG)n Simple_repeat Simple_repeat 5 29 0 5 1110 444 172 0 0 chr15 68893654 68893741 -34601233 + (TGG)n Simple_repeat Simple_repeat 1 87 0 5 1110 193 284 48 24 chr15 68896720 68896803 -34598171 + MIRc SINE MIR 112 196 -72 5 1110 207 63 78 16 chr15 68896877 68896941 -34598033 + (TA)n Simple_repeat Simple_repeat 1 68 0 5 1110 310 226 150 42 chr15 68898576 68898696 -34596278 + B1_Mur1 SINE Alu 13 145 -4 5 1110 483 274 73 84 chr15 68898721 68898912 -34596062 + B3A SINE B2 1 189 -9 5 1110 237 257 80 46 chr15 68899707 68899824 -34595150 + L1MC3 LINE L1 6798 6922 -863 5 1110 210 37 0 0 chr15 68899824 68899851 -34595123 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 5 1110 237 257 80 46 chr15 68899851 68899884 -34595090 + L1MC3 LINE L1 6923 6953 -832 5 1110 1000 127 0 17 chr15 68900298 68900474 -34594500 + (TTC)n Simple_repeat Simple_repeat 2 174 0 5 1110 258 320 13 0 chr15 68900474 68900549 -34594425 + CT-rich Low_complexity Low_complexity 5 80 0 5 1110 942 313 27 3 chr15 68900630 68900963 -34594011 + Ricksha DNA MuDR 1597 1937 -1309 5 1110 271 235 59 0 chr15 68901054 68901122 -34593852 + Ricksha DNA MuDR 1938 2009 -1237 5 1110 226 317 60 27 chr15 68901290 68901475 -34593499 + L1MD LINE L1 3506 3696 -2450 5 1110 8512 46 2 0 chr15 68901500 68903157 -34591817 - L1Md_F2 LINE L1 -2 6580 4922 5 1110 8726 66 16 7 chr15 68903147 68904283 -34590691 + L1Md_F2 LINE L1 3764 4909 -974 5 1110 3810 133 47 26 chr15 68904749 68905499 -34589475 - RMER17A LTR ERVK 0 751 1 5 1110 1038 222 5 5 chr15 68905746 68905954 -34589020 - B3 SINE B2 -7 209 2 5 1110 279 312 122 14 chr15 68906331 68906552 -34588422 - L1M4 LINE L1 -355 5829 5585 5 1110 221 320 66 13 chr15 68906573 68906649 -34588325 + PB1D10 SINE Alu 9 88 -29 5 1110 622 312 44 5 chr15 68908644 68908847 -34586127 + B3 SINE B2 6 216 0 5 1110 638 277 184 7 chr15 68909832 68910126 -34584848 - MTEa LTR MaLR 0 379 34 5 1110 516 154 0 0 chr15 68911721 68911825 -34583149 + (TG)n Simple_repeat Simple_repeat 2 105 0 5 1110 531 292 18 8 chr15 68911828 68912034 -34582940 - B3A SINE B2 -13 203 2 5 1110 517 275 55 66 chr15 68912243 68912426 -34582548 - B3A SINE B2 -15 183 3 5 1110 369 0 0 0 chr15 68912431 68912472 -34582502 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1110 426 293 84 11 chr15 68913012 68913202 -34581772 - Tigger1 DNA MER2_type -2 2416 2213 5 1110 391 253 101 31 chr15 68913245 68913404 -34581570 - Charlie1a DNA MER1_type -1245 210 41 5 1110 583 252 158 109 chr15 68915412 68915759 -34579215 + MTE2a LTR MaLR 16 379 0 5 1110 186 43 0 0 chr15 68916686 68916709 -34578265 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 5 1110 194 340 115 10 chr15 68917130 68917338 -34577636 - L2 LINE L2 -978 2441 2212 5 1110 215 105 0 50 chr15 68918486 68918526 -34576448 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 5 1110 423 38 0 0 chr15 68918917 68918970 -34576004 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1110 441 66 0 0 chr15 68920066 68920127 -34574847 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 1110 203 235 0 0 chr15 68920128 68920179 -34574795 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 5 1110 192 77 0 0 chr15 68923789 68923815 -34571159 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 5 1110 395 34 0 48 chr15 68925217 68925279 -34569695 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 5 1110 308 78 0 0 chr15 68925279 68925323 -34569651 - L1Md_F2 LINE L1 -33 6549 6506 5 1110 1220 46 0 0 chr15 68925322 68925474 -34569500 + L1_Mm LINE L1 1805 1956 -3927 5 1110 192 77 0 0 chr15 68925682 68925708 -34569266 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 5 1110 184 36 50 83 chr15 68925873 68925933 -34569041 + T-rich Low_complexity Low_complexity 1 58 0 5 1110 222 379 82 0 chr15 68927692 68927874 -34567100 - MIRb SINE MIR -37 231 35 5 1110 477 0 0 0 chr15 68929873 68929926 -34565048 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1110 450 0 0 0 chr15 68929927 68929977 -34564997 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1110 200 59 0 29 chr15 68933678 68933713 -34561261 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 1110 226 266 89 0 chr15 68934980 68935059 -34559915 - MLT1A0 LTR MaLR -264 101 16 5 1110 447 325 72 65 chr15 68935976 68936266 -34558708 - MLT1F LTR MaLR -253 295 4 5 1110 2253 153 35 15 chr15 68936520 68936918 -34558056 - MTB_Mm LTR MaLR 0 407 2 5 1110 183 139 0 0 chr15 68937576 68937612 -34557362 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1110 198 0 0 0 chr15 68938498 68938520 -34556454 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 1110 512 244 23 8 chr15 68938795 68938923 -34556051 - MTD LTR MaLR -12 407 278 5 1110 581 279 105 54 chr15 68939418 68939695 -34555279 + B4A SINE B4 2 292 0 5 1110 250 87 21 21 chr15 68939735 68939782 -34555192 + (GGGAGA)n Simple_repeat Simple_repeat 2 48 0 5 1110 243 234 0 0 chr15 68939943 68940020 -34554954 + (TCTG)n Simple_repeat Simple_repeat 4 80 0 5 1110 863 156 258 0 chr15 68940755 68940922 -34554052 + B3 SINE B2 2 211 -5 5 1110 184 246 28 28 chr15 68941224 68941295 -34553679 + MIRc SINE MIR 88 158 -110 5 1110 589 264 47 0 chr15 68941858 68942006 -34552968 + B4 SINE B4 1 155 -137 5 1110 306 301 108 0 chr15 68942087 68942253 -34552721 + MLT1D LTR MaLR 267 450 -55 5 1111 207 114 29 0 chr15 68945113 68945148 -34549826 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 5 1111 1090 81 0 0 chr15 68947938 68948074 -34546900 + B1_Mm SINE Alu 2 137 -10 5 1111 441 0 0 0 chr15 68948074 68948123 -34546851 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 5 1111 226 224 69 0 chr15 68948813 68948871 -34546103 - MIRb SINE MIR -23 245 184 5 1111 795 338 70 60 chr15 68950275 68950783 -34544191 - MLT2B5 LTR ERVL -56 545 28 5 1111 397 353 39 60 chr15 68951000 68951232 -34543742 + MER44B DNA MER2_type 224 450 -100 5 1111 189 218 36 0 chr15 68952164 68952219 -34542755 + MIRc SINE MIR 9 65 -203 5 1111 3543 76 2 0 chr15 68952360 68952807 -34542167 + L1Md_F LINE L1 413 860 -5659 5 1111 4110 31 0 1 chr15 68952800 68953332 -34541642 - L1Md_T LINE L1 -635 5947 5417 5 1111 5365 48 0 0 chr15 68953332 68953974 -34541000 + L1Md_T LINE L1 5940 6581 -1 5 1111 33308 75 1 5 chr15 68953974 68958623 -34536351 + L1Md_F2 LINE L1 966 5586 -297 5 1111 8006 58 3 0 chr15 68958624 68959616 -34535358 + L1Md_F2 LINE L1 5588 6582 0 5 1111 1051 231 111 37 chr15 68960388 68960712 -34534262 + ORR1D2 LTR MaLR 19 366 -4 5 1111 612 0 0 0 chr15 68961028 68961096 -34533878 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 1111 192 152 0 0 chr15 68961105 68961138 -34533836 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1111 299 269 0 56 chr15 68961189 68961315 -34533659 - Lx8 LINE L1 -2 7471 7353 6 1111 204 171 0 24 chr15 68961320 68961362 -34533612 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 6 1111 1681 251 69 29 chr15 68961399 68961876 -34533098 - Lx8 LINE L1 -128 7345 6850 6 1111 420 20 0 0 chr15 68961876 68961925 -34533049 + (TA)n Simple_repeat Simple_repeat 1 49 0 6 1111 770 254 134 12 chr15 68961925 68962172 -34532802 + Lx8 LINE L1 6184 6460 -1013 6 1111 198 0 0 0 chr15 68963096 68963118 -34531856 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 6 1111 357 391 70 7 chr15 68963395 68963681 -34531293 - LTR16A LTR ERVL -46 405 102 6 1111 1779 187 29 9 chr15 68963685 68964035 -34530939 - ORR1B2 LTR MaLR -10 357 1 6 1111 518 277 0 55 chr15 68965553 68965736 -34529238 + Lx8 LINE L1 7293 7465 -8 6 1111 797 0 11 0 chr15 68967042 68967135 -34527839 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 6 1111 676 240 33 7 chr15 68967135 68967286 -34527688 - Lx8 LINE L1 -327 7146 6992 6 1111 358 244 11 11 chr15 68967288 68967379 -34527595 - B1F2 SINE Alu -6 143 53 6 1111 24 0 0 0 chr15 68967495 68967519 -34527455 + AT_rich Low_complexity Low_complexity 1 24 0 6 1111 252 185 19 0 chr15 68967519 68967573 -34527401 - B3 SINE B2 -9 207 153 6 1111 325 282 0 25 chr15 68967584 68967664 -34527310 - B1_Mur3 SINE Alu -71 78 1 6 1111 2832 222 31 5 chr15 68967691 68968279 -34526695 - Lx8 LINE L1 -490 6983 6381 6 1111 404 188 141 0 chr15 68968281 68968366 -34526608 - L1M2 LINE L1 -495 5796 5700 6 1111 189 121 0 0 chr15 68969203 68969236 -34525738 + (TC)n Simple_repeat Simple_repeat 1 33 0 6 1111 516 32 0 0 chr15 68969236 68969298 -34525676 + (TG)n Simple_repeat Simple_repeat 2 63 0 6 1111 321 26 0 0 chr15 68969602 68969640 -34525334 + (TCTCTG)n Simple_repeat Simple_repeat 3 40 0 6 1111 218 302 0 16 chr15 68969640 68969704 -34525270 + CT-rich Low_complexity Low_complexity 4 66 0 6 1111 416 349 103 31 chr15 68970380 68970729 -34524245 - MLT1C LTR MaLR -7 460 87 6 1111 274 297 18 73 chr15 68970730 68970839 -34524135 - MLT2B1 LTR ERVL -374 146 44 6 1111 1959 187 40 18 chr15 68971071 68971469 -34523505 - MTB_Mm LTR MaLR 0 407 1 6 1111 539 176 0 9 chr15 68971564 68971673 -34523301 + MTB LTR MaLR 264 371 -29 6 1111 212 0 36 0 chr15 68972919 68972947 -34522027 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1111 245 122 0 0 chr15 68973844 68973885 -34521089 + ORR1A4 LTR MaLR 1 41 -288 6 1111 746 161 23 0 chr15 68973881 68974011 -34520963 + ORR1A4 LTR MaLR 197 329 0 6 1111 37833 28 1 7 chr15 68974307 68979483 -34515491 + L1Md_A LINE L1 452 5586 -297 6 1111 8439 42 0 0 chr15 68979483 68980479 -34514495 + L1Md_A LINE L1 5587 6582 0 6 1111 216 97 0 0 chr15 68980595 68980626 -34514348 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1111 237 287 191 15 chr15 68980631 68980762 -34514212 - RSINE1 SINE B4 -9 156 3 6 1111 2466 69 52 3 chr15 68981218 68981582 -34513392 + MTB LTR MaLR 1 382 -18 6 1111 233 241 58 46 chr15 68984264 68984351 -34510623 + LTR48 LTR ERV1 69 156 -631 6 1111 497 100 0 24 chr15 68984352 68984434 -34510540 + (TCTCCC)n Simple_repeat Simple_repeat 6 85 0 6 1111 223 301 41 24 chr15 68984657 68984827 -34510147 + (TATG)n Simple_repeat Simple_repeat 1 173 0 6 1111 336 145 36 12 chr15 68984840 68984924 -34510050 + (TATG)n Simple_repeat Simple_repeat 1 86 0 6 1111 1072 170 5 20 chr15 68985488 68985686 -34509288 - Lx2 LINE L1 0 6997 6803 6 1111 205 266 31 0 chr15 68985791 68985855 -34509119 + GA-rich Low_complexity Low_complexity 3 68 0 6 1111 1194 240 121 30 chr15 68986318 68986657 -34508317 + ORR1D2 LTR MaLR 1 370 0 6 1111 265 335 89 63 chr15 68986889 68987080 -34507894 + ORR1E LTR MaLR 59 254 -105 6 1111 342 45 0 0 chr15 68987367 68987411 -34507563 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1111 504 0 0 0 chr15 68987411 68987466 -34507508 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 1111 225 272 71 141 chr15 68987466 68987642 -34507332 + RLTR25A LTR ERVK 43 207 -896 6 1111 230 266 6 48 chr15 68988529 68988631 -34506343 + GA-rich Low_complexity Low_complexity 1 97 0 6 1111 348 294 60 65 chr15 68989192 68989392 -34505582 - MER58A DNA MER1_type 0 224 26 6 1111 22 35 0 0 chr15 68989492 68989521 -34505453 + AT_rich Low_complexity Low_complexity 1 29 0 6 1111 186 232 36 12 chr15 68989587 68989630 -34505344 + polypyrimidine Low_complexity Low_complexity 47 90 0 6 1111 1153 56 0 38 chr15 68989630 68989814 -34505160 + (TTCCC)n Simple_repeat Simple_repeat 4 180 0 6 1111 186 232 36 12 chr15 68989814 68989853 -34505121 + polypyrimidine Low_complexity Low_complexity 7 46 0 6 1111 507 289 5 62 chr15 68989865 68990057 -34504917 - Lx9 LINE L1 -457 7187 7007 6 1111 549 288 102 69 chr15 68991043 68991476 -34503498 - MLT1C LTR MaLR -8 459 13 6 1111 183 42 0 0 chr15 68992932 68992956 -34502018 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1111 3508 23 8 0 chr15 68993117 68993510 -34501464 - MTA_Mm LTR MaLR 0 396 1 6 1111 9442 25 6 1 chr15 68993510 68994603 -34500371 - MTA_Mm-int LTR MaLR 0 1098 1 6 1111 3543 28 0 0 chr15 68994603 68994999 -34499975 - MTA_Mm LTR MaLR 0 396 1 6 1111 231 88 0 0 chr15 68995688 68995722 -34499252 + (A)n Simple_repeat Simple_repeat 1 34 0 6 1111 191 125 25 0 chr15 68996443 68996483 -34498491 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 1111 370 0 20 20 chr15 68996841 68996892 -34498082 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1111 332 325 16 16 chr15 68996962 68997084 -34497890 - L1M5 LINE L1 -874 5272 5151 6 1111 1165 321 58 25 chr15 68997090 68997691 -34497283 + Lx8 LINE L1 6824 7444 -29 6 1111 561 361 48 24 chr15 68997710 68998085 -34496889 + MLT1C LTR MaLR 80 463 -4 6 1111 543 206 76 8 chr15 68998263 68998395 -34496579 + L1Md_A LINE L1 406 546 -6178 6 1111 594 186 165 58 chr15 68998551 68998665 -34496309 + RLTR25A LTR ERVK 832 969 -134 6 1111 587 57 0 11 chr15 68998665 68998754 -34496220 + (GA)n Simple_repeat Simple_repeat 2 89 0 6 1111 594 186 165 58 chr15 68998754 68998845 -34496129 + RLTR25A LTR ERVK 970 1059 -44 6 1111 664 110 10 0 chr15 68998921 68999021 -34495953 + B2_Mm1t SINE B2 2 102 -91 6 1111 252 0 0 0 chr15 68999045 68999073 -34495901 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 6 1111 379 164 47 19 chr15 68999894 69000000 -34494974 - Lx3_Mus LINE L1 0 7009 6901 6 1111 1066 77 0 0 chr15 69000000 69000143 -34494831 - Lx3_Mus LINE L1 -109 6900 6758 1 1111 387 0 0 0 chr15 69000407 69000450 -34494524 + (TAA)n Simple_repeat Simple_repeat 2 44 0 2 1111 684 36 0 0 chr15 69000682 69000765 -34494209 + (GA)n Simple_repeat Simple_repeat 2 84 0 3 1111 649 85 9 9 chr15 69001334 69001441 -34493533 + (TCTA)n Simple_repeat Simple_repeat 1 107 0 4 1111 23 33 0 0 chr15 69001465 69001495 -34493479 + AT_rich Low_complexity Low_complexity 1 30 0 5 1111 304 175 37 24 chr15 69001806 69001888 -34493086 + L1MA6 LINE L1 5865 5947 -353 6 1111 270 319 110 14 chr15 69001925 69002071 -34492903 - MIRb SINE MIR -78 190 31 7 1111 387 0 0 0 chr15 69003451 69003494 -34491480 + (TC)n Simple_repeat Simple_repeat 2 44 0 8 1111 429 20 0 0 chr15 69003494 69003543 -34491431 + (TG)n Simple_repeat Simple_repeat 1 50 0 9 1111 669 328 102 58 chr15 69003545 69003820 -34491154 - B4 SINE B4 -5 287 1 1 1111 379 310 238 47 chr15 69003872 69004234 -34490740 - MLT1H LTR MaLR -118 431 1 1 1111 301 366 37 19 chr15 69004671 69004846 -34490128 + MIRc SINE MIR 3 172 -104 1 1111 2645 264 58 51 chr15 69005008 69006170 -34488804 - L1_Rod LINE L1 -3 5844 4675 1 1111 1323 252 38 54 chr15 69006741 69007164 -34487810 + Lx8 LINE L1 6984 7399 -74 1 1111 360 0 0 0 chr15 69007219 69007259 -34487715 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 1 1111 186 350 17 0 chr15 69007889 69007949 -34487025 - MIRm SINE MIR -20 256 196 1 1111 182 324 0 40 chr15 69008035 69008109 -34486865 - MIRb SINE MIR -6 262 192 1 1111 576 42 0 0 chr15 69008344 69008415 -34486559 + (TA)n Simple_repeat Simple_repeat 1 71 0 1 1111 649 270 201 50 chr15 69008422 69008765 -34486209 + MTD LTR MaLR 1 395 -24 1 1111 240 238 48 0 chr15 69008938 69009001 -34485973 - L1_Rod LINE L1 -970 4877 4812 2 1111 845 256 3 38 chr15 69009025 69009313 -34485661 - L1_Mur3 LINE L1 -1130 4750 4473 2 1111 735 215 14 22 chr15 69009349 69009487 -34485487 + B1_Mur3 SINE Alu 1 137 -12 2 1111 852 41 99 0 chr15 69009845 69009966 -34485008 - L1Md_T LINE L1 -1 6581 6449 2 1111 188 299 102 9 chr15 69010457 69010565 -34484409 - L2a LINE L2 -9 3417 3300 2 1111 264 280 89 10 chr15 69010683 69010784 -34484190 - Arthur1 DNA Tip100 -4 3943 3835 2 1111 516 375 30 5 chr15 69010790 69010991 -34483983 + ID_B1 SINE B4 7 212 -12 2 1111 582 15 0 0 chr15 69011039 69011106 -34483868 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 2 1111 2034 296 83 32 chr15 69011127 69012394 -34482580 - Arthur1 DNA Tip100 -109 3838 2507 2 1111 386 260 9 19 chr15 69012608 69012714 -34482260 + RMER12 LTR ERVK 752 856 -466 2 1111 335 106 15 0 chr15 69012810 69012876 -34482098 + (TATG)n Simple_repeat Simple_repeat 2 68 0 2 1111 581 271 118 42 chr15 69012898 69013306 -34481668 - L1MA4A LINE L1 -340 5963 5525 3 1111 234 316 0 31 chr15 69013380 69013478 -34481496 - L1_Mm LINE L1 -390 5493 5399 3 1111 286 305 176 28 chr15 69013531 69013747 -34481227 - Lx8 LINE L1 -7 7466 7219 3 1111 851 209 60 25 chr15 69013924 69014125 -34480849 - ORR1D1 LTR MaLR 0 374 167 3 1111 495 179 14 7 chr15 69014126 69014267 -34480707 + GA-rich Low_complexity Low_complexity 1 142 0 3 1111 440 255 26 70 chr15 69014267 69014439 -34480535 - ORR1D1 LTR MaLR -157 210 68 3 1111 2627 280 62 19 chr15 69014444 69015473 -34479501 - L1_Mur3 LINE L1 -129 5751 4678 3 1111 237 329 0 12 chr15 69015513 69015593 -34479381 - ID4_ SINE ID -4 79 1 3 1111 380 301 67 20 chr15 69015720 69015869 -34479105 - Arthur1 DNA Tip100 -1565 2382 2227 2 1111 666 0 0 0 chr15 69015952 69016026 -34478948 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 3 1111 1130 75 7 0 chr15 69016050 69016197 -34478777 - B1_Mus1 SINE Alu 0 148 1 3 1111 369 0 0 0 chr15 69016200 69016241 -34478733 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1111 380 324 134 89 chr15 69016242 69016689 -34478285 - Arthur1 DNA Tip100 -2284 1663 1197 2 1111 306 301 138 37 chr15 69016689 69017026 -34477948 - HAL1-3A_ME LINE L1 -414 2444 2282 4 1111 265 269 13 0 chr15 69017028 69017106 -34477868 + CT-rich Low_complexity Low_complexity 2 80 0 4 1111 270 279 27 41 chr15 69017132 69017267 -34477707 - Arthur1 DNA Tip100 -2805 1142 1009 2 1111 582 15 0 0 chr15 69017267 69017334 -34477640 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 1111 183 42 0 0 chr15 69017432 69017456 -34477518 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1111 23 68 0 0 chr15 69018762 69018806 -34476168 + AT_rich Low_complexity Low_complexity 1 44 0 4 1111 7399 73 3 2 chr15 69019719 69021071 -34473903 - L1_Mus1 LINE L1 0 6567 5215 4 1111 29 0 0 0 chr15 69021208 69021237 -34473737 + AT_rich Low_complexity Low_complexity 1 29 0 4 1111 439 281 21 56 chr15 69021337 69021480 -34473494 - RSINE1 SINE B4 -25 140 3 4 1111 254 340 51 13 chr15 69021749 69021907 -34473067 - MLT1F-int LTR MaLR -1056 353 190 4 1111 517 268 217 44 chr15 69022563 69022887 -34472087 - MLT1F LTR MaLR -12 543 157 4 1111 824 48 0 0 chr15 69022890 69022993 -34471981 - B1_Mm SINE Alu -1 146 44 4 1111 6593 115 8 23 chr15 69022994 69024944 -34470030 - L1VL1 LINE L1 -1591 2107 195 5 1111 6800 100 19 0 chr15 69024953 69026032 -34468942 - MusHAL1 LINE L1 -322 2390 1291 5 1111 732 284 30 64 chr15 69026039 69026272 -34468702 - B4 SINE B4 -63 229 5 5 1111 499 319 118 23 chr15 69027151 69027372 -34467602 + B4 SINE B4 26 267 -25 5 1111 648 288 81 104 chr15 69028284 69028641 -34466333 - ORR1E LTR MaLR -10 349 1 5 1111 362 330 82 25 chr15 69028788 69029068 -34465906 + L1MC LINE L1 3679 3974 -2172 5 1111 25 75 0 0 chr15 69029267 69029320 -34465654 + AT_rich Low_complexity Low_complexity 1 53 0 5 1111 900 248 4 49 chr15 69029880 69030105 -34464869 + B3 SINE B2 1 215 -1 5 1111 195 69 0 0 chr15 69030850 69030879 -34464095 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1111 3496 109 11 2 chr15 69031086 69031620 -34463354 - L1_Mus3 LINE L1 -5 5878 5340 5 1111 5481 76 15 4 chr15 69031620 69032369 -34462605 + L1_Mus3 LINE L1 5882 6638 0 5 1111 329 401 47 25 chr15 69032960 69033236 -34461738 - L1ME3B LINE L1 -396 5844 5563 6 1111 779 260 18 2 chr15 69033650 69033922 -34461052 + Lx8 LINE L1 5609 5899 -1574 6 1111 193 316 0 34 chr15 69034778 69034837 -34460137 - MIR3 SINE MIR -41 167 111 6 1111 2419 192 21 37 chr15 69035375 69035893 -34459081 - RMER1B Other Other -1 1065 556 6 1111 22 35 0 0 chr15 69036534 69036563 -34458411 + AT_rich Low_complexity Low_complexity 1 29 0 6 1111 1117 21 14 0 chr15 69036944 69037084 -34457890 + (TC)n Simple_repeat Simple_repeat 1 142 0 6 1111 201 340 10 10 chr15 69037467 69037565 -34457409 + CT-rich Low_complexity Low_complexity 5 102 0 6 1111 360 0 0 0 chr15 69038401 69038441 -34456533 + (CAAAA)n Simple_repeat Simple_repeat 5 44 0 6 1111 618 122 9 42 chr15 69038549 69038672 -34456302 + Lx4A LINE L1 5761 5878 -1131 6 1111 4358 33 2 2 chr15 69038672 69039185 -34455789 + L1Md_F2 LINE L1 6069 6581 -1 6 1111 478 176 57 63 chr15 69039185 69039219 -34455755 + Lx4A LINE L1 5879 5917 -1092 6 1111 6753 151 24 21 chr15 69039219 69040381 -34454593 + Lx4A LINE L1 5891 7056 -2 7 1111 1622 219 75 29 chr15 69040410 69040814 -34454160 - MTD LTR MaLR -14 405 1 7 1111 342 0 0 0 chr15 69041680 69041718 -34453256 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1111 324 48 0 0 chr15 69042019 69042061 -34452913 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 1111 258 32 0 0 chr15 69042061 69042091 -34452883 + (GA)n Simple_repeat Simple_repeat 2 32 0 7 1111 29 47 0 0 chr15 69042258 69042301 -34452673 + AT_rich Low_complexity Low_complexity 1 43 0 7 1111 199 282 70 104 chr15 69042665 69042780 -34452194 - MIRc SINE MIR -114 154 44 7 1111 224 100 25 0 chr15 69042817 69042857 -34452117 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 7 1111 229 380 13 0 chr15 69042863 69042942 -34452032 - ID_B1 SINE B4 -22 202 123 7 1111 465 19 0 0 chr15 69043703 69043757 -34451217 + (T)n Simple_repeat Simple_repeat 1 54 0 7 1111 33682 31 0 2 chr15 69043768 69048802 -34446172 - L1Md_T LINE L1 0 6582 1561 8 1111 352 332 69 35 chr15 69049196 69049459 -34445515 - LTR16C LTR ERVL -20 518 242 8 1111 1670 236 55 5 chr15 69049599 69050020 -34444954 - Lx6 LINE L1 -27 7433 6992 8 1111 3684 93 43 48 chr15 69051475 69052054 -34442920 + Lx3A LINE L1 6402 6977 -4 8 1111 1023 145 124 5 chr15 69052114 69052315 -34442659 - URR1A DNA MER1_type -1 225 1 8 1111 395 297 0 29 chr15 69052549 69052653 -34442321 + PB1D10 SINE Alu 13 113 -4 8 1111 2097 311 57 50 chr15 69053016 69053837 -34441137 - MER21B LTR ERV1 -5 858 32 8 1111 188 374 30 10 chr15 69054210 69054310 -34440664 - L2b LINE L2 -222 3153 3052 8 1111 536 308 63 0 chr15 69054342 69054501 -34440473 + B3A SINE B2 1 169 -29 8 1111 387 0 0 0 chr15 69056525 69056568 -34438406 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 1111 365 336 9 0 chr15 69056601 69056708 -34438266 - RSINE1 SINE B4 -57 108 1 9 1111 299 323 108 0 chr15 69057959 69058089 -34436885 - B1F1 SINE Alu -5 144 1 9 1111 28930 109 15 11 chr15 69058265 69061852 -34433122 + L1_Mus1 LINE L1 576 4196 -1687 9 1111 891 94 0 0 chr15 69061852 69061979 -34432995 + (TA)n Simple_repeat Simple_repeat 2 128 0 9 1111 28930 92 8 8 chr15 69061979 69064369 -34430605 + L1_Mus1 LINE L1 4197 6567 0 9 1111 1247 125 4 44 chr15 69065542 69065768 -34429206 - Lx2 LINE L1 -6 6991 6775 9 1111 6287 129 15 9 chr15 69065766 69066435 -34428539 - Lx2 LINE L1 -352 6645 5971 9 1111 3437 23 5 0 chr15 69066435 69066829 -34428145 - MTA_Mm LTR MaLR 0 396 1 9 1111 6491 150 12 63 chr15 69066829 69067506 -34427468 - Lx2 LINE L1 -1027 5970 5293 9 1111 5431 48 0 5 chr15 69067506 69068176 -34426798 - L1Md_F2 LINE L1 -2 6580 5914 9 1111 1142 46 60 0 chr15 69068176 69068327 -34426647 + B2_Mm1a SINE B2 3 162 -31 9 1111 6491 176 7 132 chr15 69068327 69068841 -34426133 - Lx2 LINE L1 -585 5292 4837 9 1111 1075 104 0 0 chr15 69068841 69068985 -34425989 - B1_Mus2 SINE Alu -2 145 2 9 1111 6491 176 7 132 chr15 69068985 69069536 -34425438 - Lx2 LINE L1 -1041 4836 4296 9 1111 2839 74 25 10 chr15 69069540 69069934 -34425040 - MTB LTR MaLR 0 400 1 9 1111 3016 113 12 34 chr15 69069934 69070546 -34424428 - MTB-int LTR MaLR -761 1202 604 9 1111 7899 92 18 11 chr15 69071916 69072085 -34422889 - MusHAL1 LINE L1 -762 1950 1789 1 1111 306 0 0 0 chr15 69072085 69072119 -34422855 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1 1111 7899 92 18 11 chr15 69072119 69073211 -34421763 - MusHAL1 LINE L1 -924 1788 680 1 1111 4038 65 32 2 chr15 69073211 69073748 -34421226 - L1Md_F2 LINE L1 -2 6580 6028 1 138 5987 157 7 121 chr15 69073748 69075517 -34419457 - Lx2 LINE L1 -3993 1893 604 9 1112 713 306 36 92 chr15 69075892 69076252 -34418722 - MTEa LTR MaLR -22 357 18 1 1112 519 31 0 0 chr15 69076570 69076635 -34418339 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 1112 414 382 59 0 chr15 69077663 69077867 -34417107 + MER20 DNA MER1_type 1 216 -3 1 1112 474 324 28 33 chr15 69078085 69078267 -34416707 - RMER15 LTR ERVL -40 535 355 1 1112 847 186 23 23 chr15 69078461 69078637 -34416337 - B2_Mm2 SINE B2 -16 179 4 1 1112 225 83 0 0 chr15 69078806 69078842 -34416132 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1112 436 316 53 65 chr15 69080089 69080336 -34414638 + MLT1C LTR MaLR 13 256 -211 1 1112 668 303 65 72 chr15 69080735 69081027 -34413947 + MLT2B1 LTR ERVL 16 305 -215 1 1112 319 270 8 67 chr15 69081038 69081157 -34413817 + MLT2B1 LTR ERVL 436 547 -20 1 1112 249 177 35 17 chr15 69081216 69081331 -34413643 + (TCTA)n Simple_repeat Simple_repeat 2 118 0 1 1112 383 320 84 66 chr15 69081348 69081685 -34413289 - MTEa LTR MaLR -8 371 7 1 1112 324 245 66 27 chr15 69081793 69081912 -34413062 + MLT1C LTR MaLR 342 502 -3 1 1112 836 312 66 25 chr15 69082097 69082416 -34412558 - MER2 DNA MER2_type 0 345 14 1 1112 939 267 122 58 chr15 69084378 69084772 -34410202 + MTD LTR MaLR 1 419 0 1 1112 1326 260 26 42 chr15 69085206 69085632 -34409342 + MTD LTR MaLR 1 419 0 1 1112 180 0 0 0 chr15 69086477 69086497 -34408477 + (CCA)n Simple_repeat Simple_repeat 1 20 0 1 1112 192 365 70 35 chr15 69088354 69088496 -34406478 + MIRb SINE MIR 7 153 -115 1 1112 225 349 64 9 chr15 69089148 69089258 -34405716 + L2b LINE L2 2924 3039 -336 1 1112 214 268 92 59 chr15 69090996 69091115 -34403859 + MIRb SINE MIR 116 238 -30 1 1112 315 336 115 52 chr15 69092442 69092712 -34402262 - MLT1I LTR MaLR -107 304 18 1 1112 197 413 0 0 chr15 69092808 69092900 -34402074 - MIRc SINE MIR -105 163 72 1 1112 879 281 64 35 chr15 69093755 69094160 -34400814 + MTD LTR MaLR 1 417 -2 1 1112 263 324 78 44 chr15 69094673 69094890 -34400084 - L2c LINE L2 -8 3367 3166 1 1112 490 232 53 9 chr15 69095069 69095182 -34399792 + MTD LTR MaLR 1 118 -301 1 1112 6274 56 2 2 chr15 69095182 69095982 -34398992 - L1Md_F2 LINE L1 0 6582 5783 1 1112 4946 16 0 0 chr15 69095977 69096536 -34398438 - L1Md_A LINE L1 0 6582 6024 1 1112 32436 69 3 5 chr15 69096536 69101733 -34393241 - L1Md_Gf LINE L1 -102 5784 92 1 1112 1328 179 128 4 chr15 69101735 69102009 -34392965 + MTD LTR MaLR 112 419 0 1 1112 389 342 0 14 chr15 69102023 69102171 -34392803 + CT-rich Low_complexity Low_complexity 2 147 0 1 1112 278 246 0 71 chr15 69102238 69102308 -34392666 + MLT1E1A LTR MaLR 579 643 -37 1 1112 924 163 3 17 chr15 69103448 69103745 -34391229 + CT-rich Low_complexity Low_complexity 1 292 0 1 1112 501 62 0 0 chr15 69105328 69105393 -34389581 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 1112 519 300 87 107 chr15 69105736 69106102 -34388872 - ORR1E LTR MaLR 0 359 1 1 1112 288 317 40 24 chr15 69106377 69106503 -34388471 + MIRb SINE MIR 124 251 -17 1 1112 537 237 133 44 chr15 69107402 69107583 -34387391 + B3A SINE B2 1 197 -1 1 1112 247 196 0 19 chr15 69107617 69107669 -34387305 + (CTA)n Simple_repeat Simple_repeat 1 51 0 1 1112 552 30 0 0 chr15 69107927 69107993 -34386981 + (GAAA)n Simple_repeat Simple_repeat 2 67 0 1 1112 279 250 87 101 chr15 69108483 69108621 -34386353 - MLT1A0 LTR MaLR -9 586 451 1 1112 425 306 43 6 chr15 69109146 69109307 -34385667 - MLT1A0 LTR MaLR -28 337 171 1 1112 1046 139 138 5 chr15 69109334 69109529 -34385445 - URR1A DNA MER1_type 0 226 6 1 1112 316 319 71 14 chr15 69109532 69109672 -34385302 - MLT1A0 LTR MaLR -215 150 3 1 1112 595 275 249 18 chr15 69109878 69110312 -34384662 - Lx8 LINE L1 -29 7444 6911 1 1112 267 103 0 0 chr15 69110542 69110581 -34384393 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 1112 564 62 0 0 chr15 69110673 69110754 -34384220 + (CA)n Simple_repeat Simple_repeat 1 81 0 1 1112 288 100 28 28 chr15 69110755 69110827 -34384147 + A-rich Low_complexity Low_complexity 5 76 0 1 1112 822 291 102 23 chr15 69110827 69111257 -34383717 - Lx7 LINE L1 -333 7363 6900 1 1112 22 35 0 0 chr15 69111752 69111781 -34383193 + AT_rich Low_complexity Low_complexity 1 29 0 1 1112 474 267 133 0 chr15 69112326 69112476 -34382498 - RMER30 DNA MER1_type -23 179 10 1 1112 3198 154 9 71 chr15 69112635 69113285 -34381689 + Lx4B LINE L1 6443 7052 -6 1 1112 635 274 42 0 chr15 69113314 69113482 -34381492 + B3 SINE B2 32 206 -10 1 1112 322 377 97 13 chr15 69114454 69114847 -34380127 - L1ME3 LINE L1 -49 6113 5689 1 1112 682 330 6 0 chr15 69114983 69115159 -34379815 - ID_B1 SINE B4 -28 196 20 1 1112 182 326 0 0 chr15 69115353 69115402 -34379572 + MIRm SINE MIR 105 153 -123 1 1112 7573 64 0 0 chr15 69116801 69117810 -34377164 - L1_Mus1 LINE L1 -4 6563 5558 1 1112 351 171 0 0 chr15 69118647 69118723 -34376251 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 1 1112 402 21 0 0 chr15 69119360 69119407 -34375567 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1 1112 530 330 85 15 chr15 69119621 69119892 -34375082 + RMER15 LTR ERVL 286 575 0 1 1112 204 175 0 24 chr15 69119966 69120007 -34374967 + GA-rich Low_complexity Low_complexity 3 42 0 1 1112 184 295 85 64 chr15 69120745 69120839 -34374135 - L3 LINE CR1 -1428 3061 2966 1 1112 21 36 0 0 chr15 69121427 69121455 -34373519 + AT_rich Low_complexity Low_complexity 1 28 0 1 1112 488 16 16 0 chr15 69122196 69122257 -34372717 + (TCTA)n Simple_repeat Simple_repeat 3 64 0 1 1112 192 200 0 0 chr15 69122287 69122332 -34372642 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1112 351 0 0 0 chr15 69123457 69123496 -34371478 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1112 231 274 0 0 chr15 69125192 69125243 -34369731 + GA-rich Low_complexity Low_complexity 1 51 0 1 1112 240 35 0 0 chr15 69125246 69125275 -34369699 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1112 333 0 0 0 chr15 69125275 69125311 -34369663 + (GA)n Simple_repeat Simple_repeat 2 38 0 1 1112 264 326 116 0 chr15 69127096 69127191 -34367783 - MIRb SINE MIR -151 117 12 1 1112 1900 177 79 42 chr15 69127192 69127598 -34367376 + MTC LTR MaLR 1 421 0 1 1112 309 82 0 0 chr15 69127813 69127862 -34367112 + (T)n Simple_repeat Simple_repeat 1 49 0 1 1112 265 383 26 0 chr15 69128396 69128550 -34366424 - ERVL-E-int LTR ERVL -714 4953 4796 1 1112 2786 260 52 38 chr15 69128830 69129678 -34365296 - RCHARR1 DNA MER1_type -64 910 51 1 1112 412 339 136 17 chr15 69129690 69129867 -34365107 - MLT1E3 LTR MaLR -44 580 383 1 1112 1009 96 7 27 chr15 69130273 69130423 -34364551 + B1_Mus1 SINE Alu 1 147 -1 1 1112 1090 178 23 9 chr15 69131405 69131626 -34363348 + URR1A DNA MER1_type 1 224 -2 1 1112 393 360 23 17 chr15 69131687 69131862 -34363112 + MIRb SINE MIR 18 193 -75 1 1112 181 298 0 0 chr15 69132888 69132935 -34362039 - L2a LINE L2 -2 3424 3378 1 1112 780 287 37 21 chr15 69134449 69134533 -34360441 + MER2 DNA MER2_type 1 84 -261 1 1112 415 290 18 36 chr15 69134533 69134644 -34360330 + PB1D10 SINE Alu 2 110 -7 1 1112 780 287 37 21 chr15 69134644 69134801 -34360173 + MER2 DNA MER2_type 85 246 -99 1 1112 285 319 0 11 chr15 69134848 69134940 -34360034 + (TG)n Simple_repeat Simple_repeat 2 92 0 1 1112 249 291 36 0 chr15 69135061 69135116 -34359858 - ID_B1 SINE B4 -82 142 86 1 1112 601 294 63 24 chr15 69135134 69135340 -34359634 - B3 SINE B2 0 216 3 1 1112 236 342 83 0 chr15 69135920 69136040 -34358934 + L2a LINE L2 3074 3203 -223 1 1112 554 48 47 24 chr15 69136074 69136154 -34358820 - L1_Mus3 LINE L1 -362 6276 6194 1 1112 2683 68 8 3 chr15 69136154 69136508 -34358466 + L1_Mus3 LINE L1 6277 6632 -6 1 1112 25 0 0 0 chr15 69138237 69138262 -34356712 + AT_rich Low_complexity Low_complexity 1 25 0 1 1112 243 0 0 0 chr15 69138933 69138960 -34356014 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1112 297 207 0 0 chr15 69139339 69139421 -34355553 + (TA)n Simple_repeat Simple_repeat 1 82 0 1 1112 1163 69 14 0 chr15 69140141 69140286 -34354688 - B1_Mus1 SINE Alu 0 148 2 1 1112 217 343 75 27 chr15 69140514 69140661 -34354313 + MIRb SINE MIR 7 160 -108 1 1112 234 195 0 0 chr15 69140665 69140706 -34354268 - MLT2B1 LTR ERVL 0 559 519 1 1112 599 314 230 18 chr15 69140703 69141046 -34353928 - MLT2B1 LTR ERVL -104 416 1 1 1112 23 54 0 0 chr15 69141541 69141578 -34353396 + AT_rich Low_complexity Low_complexity 1 37 0 1 1112 274 288 26 58 chr15 69142770 69142824 -34352150 - Lx8 LINE L1 -574 6899 6847 1 1112 1260 69 87 0 chr15 69142824 69142997 -34351977 + B2_Mm2 SINE B2 1 188 -7 1 1112 2146 96 0 49 chr15 69142997 69143324 -34351650 + L1Md_F2 LINE L1 6258 6568 -14 1 1112 274 288 26 58 chr15 69143324 69143423 -34351551 - Lx8 LINE L1 -627 6846 6751 1 1112 391 272 28 108 chr15 69143431 69143645 -34351329 + Lx8 LINE L1 7275 7471 -2 1 1112 704 252 0 0 chr15 69143650 69143809 -34351165 + Lx5 LINE L1 6252 6410 -640 1 1112 373 255 161 57 chr15 69144064 69144380 -34350594 - L1MEe LINE L1 -3553 2984 2636 1 1112 247 404 62 6 chr15 69144432 69144594 -34350380 + L2 LINE L2 2881 3051 -368 1 1112 429 337 36 12 chr15 69144768 69144936 -34350038 - MLT1C LTR MaLR -39 428 257 1 1112 2040 88 64 61 chr15 69144947 69145273 -34349701 + ORR1A2 LTR MaLR 1 327 0 1 1112 341 157 110 154 chr15 69145650 69145664 -34349310 - B2_Mm2 SINE B2 -18 177 164 1 1112 501 92 0 0 chr15 69145664 69145740 -34349234 + (TG)n Simple_repeat Simple_repeat 1 76 0 1 1112 609 173 96 137 chr15 69145740 69145882 -34349092 - B3A SINE B2 -32 163 27 1 1112 1330 116 43 22 chr15 69145885 69146115 -34348859 - L1Md_F2 LINE L1 0 6582 6348 1 1112 5152 47 1 0 chr15 69146125 69146966 -34348008 - L1Md_F2 LINE L1 -342 6240 5399 1 1112 32 0 0 0 chr15 69147249 69147281 -34347693 + AT_rich Low_complexity Low_complexity 1 32 0 2 1112 305 332 7 0 chr15 69147593 69147764 -34347210 - L1MEe LINE L1 -4565 1992 1785 1 1112 1083 290 30 25 chr15 69148444 69148808 -34346166 - Lx6 LINE L1 -45 7415 7050 2 1112 529 266 39 8 chr15 69150033 69150162 -34344812 + MLT1J LTR MaLR 238 370 -142 2 1112 466 354 126 4 chr15 69150376 69150614 -34344360 + RMER15 LTR ERVL 296 562 -13 2 1112 398 299 48 36 chr15 69150675 69150984 -34343990 + L1MA6 LINE L1 5716 6028 -272 2 1112 189 107 0 0 chr15 69151547 69151575 -34343399 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1112 2715 183 46 4 chr15 69151936 69152435 -34342539 + RLTR11A2 LTR ERVK 1 520 -7 2 1112 237 352 0 90 chr15 69153919 69154119 -34340855 + L2a LINE L2 3230 3411 -15 2 1112 189 0 0 0 chr15 69154121 69154142 -34340832 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 2 1112 280 316 13 0 chr15 69154641 69154720 -34340254 + LFSINE_Vert SINE SINE 42 121 -338 2 1112 524 56 14 0 chr15 69155673 69155745 -34339229 + (CAATT)n Simple_repeat Simple_repeat 3 75 0 2 1112 550 319 92 55 chr15 69156286 69156558 -34338416 + B4A SINE B4 1 282 -10 2 1112 290 269 87 65 chr15 69156719 69156859 -34338115 + MIRb SINE MIR 120 258 -4 2 1112 224 309 47 47 chr15 69157203 69157332 -34337642 + L3 LINE CR1 4328 4456 -33 2 1112 348 246 89 8 chr15 69158098 69158221 -34336753 - Lx8 LINE L1 -1561 5912 5780 2 1112 1005 140 42 21 chr15 69158495 69158685 -34336289 - B2_Mm2 SINE B2 -1 194 1 2 1112 230 233 64 43 chr15 69158859 69158953 -34336021 + MamRep4096 DNA hAT? 309 404 -22 2 1112 648 70 0 0 chr15 69159727 69159813 -34335161 + (GA)n Simple_repeat Simple_repeat 1 86 0 2 1112 954 148 0 0 chr15 69159813 69159975 -34334999 + (GGA)n Simple_repeat Simple_repeat 2 163 0 2 1112 252 345 41 25 chr15 69160964 69161086 -34333888 + MIR SINE MIR 78 201 -61 2 1112 207 171 0 0 chr15 69161134 69161169 -34333805 + (CAT)n Simple_repeat Simple_repeat 2 36 0 2 1112 647 287 64 67 chr15 69161430 69161828 -34333146 - RMER20A LTR ERVK -59 568 177 2 1112 25 31 0 0 chr15 69161828 69161860 -34333114 + AT_rich Low_complexity Low_complexity 1 32 0 2 1112 4490 142 44 20 chr15 69161860 69163026 -34331948 - L1_Mus2 LINE L1 -2 6564 5356 2 1112 522 0 0 0 chr15 69163026 69163084 -34331890 + (TTTTA)n Simple_repeat Simple_repeat 4 61 0 2 1112 4181 134 14 6 chr15 69163084 69163285 -34331689 - L1_Mus2 LINE L1 -528 5355 5156 2 1112 4012 127 12 26 chr15 69163285 69163488 -34331486 + L1_Mm LINE L1 4430 4633 -1250 2 1112 1654 95 20 4 chr15 69163488 69163742 -34331232 + L1_Mus3 LINE L1 6376 6633 -5 2 1112 4012 127 12 26 chr15 69163742 69164258 -34330716 + L1_Mm LINE L1 4634 5139 -744 2 1112 898 196 42 16 chr15 69164259 69164451 -34330523 - RMER20A LTR ERVK -317 199 3 2 1112 650 270 92 0 chr15 69164517 69164713 -34330261 + B3 SINE B2 3 216 0 2 1112 1251 6 6 13 chr15 69165017 69165175 -34329799 + (TCTA)n Simple_repeat Simple_repeat 1 157 0 2 1112 1244 223 135 137 chr15 69165233 69165767 -34329207 - MT2A LTR ERVL 0 533 1 2 1112 1133 69 7 0 chr15 69167611 69167756 -34327218 - B1_Mm SINE Alu 0 147 2 2 1112 298 337 117 54 chr15 69168060 69168377 -34326597 + MLT1A LTR MaLR 4 340 -34 2 1112 621 97 0 50 chr15 69168822 69168942 -34326032 - Lx LINE L1 0 6654 6541 2 1112 38 0 0 0 chr15 69170401 69170439 -34324535 + AT_rich Low_complexity Low_complexity 1 38 0 2 1112 1041 236 101 4 chr15 69170513 69170790 -34324184 - Lx8 LINE L1 -118 7355 7052 2 1112 293 304 26 33 chr15 69170834 69170987 -34323987 - Lx8 LINE L1 -543 6930 6779 2 1112 1699 195 108 12 chr15 69171606 69171948 -34323026 - MTC LTR MaLR 0 421 47 2 1112 340 143 14 14 chr15 69171948 69172019 -34322955 + CT-rich Low_complexity Low_complexity 2 72 0 2 1112 1048 117 0 14 chr15 69172029 69172177 -34322797 - B1_Mus1 SINE Alu 0 148 3 2 1112 437 156 13 0 chr15 69172178 69172255 -34322719 - MTC LTR MaLR -342 79 2 2 1112 215 382 64 0 chr15 69172527 69172684 -34322290 + MIR SINE MIR 31 197 -65 2 1112 931 207 86 5 chr15 69174074 69174283 -34320691 + URR1A DNA MER1_type 1 226 0 2 1112 1075 112 0 12 chr15 69175916 69176078 -34318896 + B2_Mm2 SINE B2 2 161 -34 2 1112 360 0 0 0 chr15 69176078 69176118 -34318856 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 2 1112 349 310 92 37 chr15 69176852 69177016 -34317958 + MIRb SINE MIR 28 200 -68 2 1112 307 267 105 0 chr15 69177764 69177850 -34317124 - L2c LINE L2 -233 3154 3060 2 1112 610 285 104 52 chr15 69178086 69178356 -34316618 + MER2 DNA MER2_type 8 291 -54 2 1112 345 262 33 72 chr15 69178366 69178518 -34316456 - L1MCb LINE L1 -5074 1586 1441 2 1112 2922 279 84 7 chr15 69178520 69179380 -34315594 - RMER1A Other Other -5 1025 100 2 1112 643 327 34 62 chr15 69179612 69180006 -34314968 - MTE2a LTR MaLR -45 374 1 2 1112 494 294 108 79 chr15 69180031 69180374 -34314600 - L1MCb LINE L1 -4858 1187 835 2 1112 319 248 28 19 chr15 69180463 69180570 -34314404 - L1MCb LINE L1 -5329 716 609 2 1112 440 153 12 0 chr15 69181455 69181540 -34313434 + Lx3C LINE L1 6889 6974 -2 2 1112 314 239 154 49 chr15 69181657 69181780 -34313194 + RMER15 LTR ERVL 424 559 -16 2 1112 336 24 0 0 chr15 69181992 69182033 -34312941 + (TA)n Simple_repeat Simple_repeat 1 41 0 2 1112 234 0 0 0 chr15 69182513 69182539 -34312435 + (CAGA)n Simple_repeat Simple_repeat 3 28 0 2 1112 1431 148 8 27 chr15 69182712 69182975 -34311999 + Lx LINE L1 6397 6654 0 2 1112 256 241 0 0 chr15 69183335 69183389 -34311585 + (CCA)n Simple_repeat Simple_repeat 3 56 0 2 1112 251 114 0 22 chr15 69183428 69183473 -34311501 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 2 1112 417 223 26 31 chr15 69183486 69183610 -34311364 - B1F SINE Alu -1 148 3 2 1112 243 259 0 0 chr15 69185070 69185124 -34309850 + MLT1C LTR MaLR 3 56 -411 2 1112 511 275 28 48 chr15 69185131 69185276 -34309698 - B4A SINE B4 -127 165 24 2 1112 211 239 68 82 chr15 69185214 69185287 -34309687 - ID4 SINE ID -1 82 11 2 1112 1927 206 7 2 chr15 69185433 69185842 -34309132 - Lx2B LINE L1 -626 6374 5964 2 1112 2978 197 24 21 chr15 69185844 69186462 -34308512 + Lx2B LINE L1 6379 6998 -2 2 1112 272 332 52 56 chr15 69186465 69186714 -34308260 - L1MA6 LINE L1 -150 6150 5903 2 1112 180 0 0 0 chr15 69186807 69186827 -34308147 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1112 465 110 0 0 chr15 69187640 69187713 -34307261 + (TA)n Simple_repeat Simple_repeat 2 74 0 2 1112 222 184 0 0 chr15 69188459 69188497 -34306477 + CT-rich Low_complexity Low_complexity 5 42 0 2 1112 345 162 0 0 chr15 69188729 69188797 -34306177 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 1112 282 345 11 0 chr15 69188897 69188984 -34305990 - MLT2F LTR ERVL -560 103 16 2 1112 654 213 88 10 chr15 69189275 69189479 -34305495 + L1_Mur3 LINE L1 5358 5577 -303 2 1112 478 275 37 51 chr15 69189493 69189708 -34305266 - L1_Mur3 LINE L1 -524 5356 5145 2 1112 214 387 0 0 chr15 69189949 69190024 -34304950 - B1F1 SINE Alu -52 97 23 2 1112 222 118 0 0 chr15 69190372 69190406 -34304568 + (TTCTCC)n Simple_repeat Simple_repeat 3 36 0 2 1112 2890 52 0 0 chr15 69190470 69190816 -34304158 + ORR1A0 LTR MaLR 1 346 0 2 1112 13358 61 23 1 chr15 69190816 69192568 -34302406 + ORR1A0-int LTR MaLR 1 1792 0 2 1112 2027 29 0 0 chr15 69192568 69192813 -34302161 + ORR1A0 LTR MaLR 1 245 -101 2 1112 2143 91 32 3 chr15 69192824 69193132 -34301842 - IAPLTR2b LTR ERVK -10 317 1 2 1112 816 58 0 0 chr15 69193132 69193236 -34301738 + ORR1A0 LTR MaLR 235 338 -8 2 1112 1357 312 41 6 chr15 69193239 69193749 -34301225 + Lx8 LINE L1 6916 7443 -30 2 1112 235 346 42 76 chr15 69195134 69195278 -34299696 - MamGypLTR3 LTR Gypsy -9 830 692 2 1112 4348 217 86 37 chr15 69195451 69196496 -34298478 - Lx5 LINE L1 -7 7043 5945 2 1112 387 0 0 0 chr15 69196496 69196539 -34298435 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1112 4348 217 86 37 chr15 69196539 69196695 -34298279 - Lx5 LINE L1 -1106 5944 5784 2 1112 2404 159 14 2 chr15 69196706 69197140 -34297834 + L1_Mur2 LINE L1 5348 5786 -91 2 1112 24 32 0 0 chr15 69198248 69198279 -34296695 + AT_rich Low_complexity Low_complexity 1 31 0 2 1112 272 49 0 47 chr15 69198314 69198357 -34296617 + (GGGAGA)n Simple_repeat Simple_repeat 3 43 0 2 1112 319 252 270 35 chr15 69198377 69198492 -34296482 - RSINE1 SINE B4 -18 147 6 2 1112 198 245 40 17 chr15 69199312 69199380 -34295594 - MIR SINE MIR -136 132 62 2 1112 296 249 12 12 chr15 69199669 69199836 -34295138 + (TA)n Simple_repeat Simple_repeat 1 167 0 2 1112 306 351 35 24 chr15 69200997 69201166 -34293808 + MER5B DNA MER1_type 5 175 -3 2 1112 253 265 58 35 chr15 69201545 69201631 -34293343 - MIR3 SINE MIR -36 172 85 2 1112 360 0 0 0 chr15 69203662 69203702 -34291272 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1112 206 32 32 0 chr15 69204592 69204623 -34290351 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 1112 328 335 112 14 chr15 69204637 69204852 -34290122 + MLT1K LTR MaLR 196 431 -164 2 1112 201 74 0 0 chr15 69205877 69205904 -34289070 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 2 17 4147 37 0 0 chr15 69205934 69206421 -34288553 - L1Md_T LINE L1 -1 6581 6095 2 1113 7789 42 5 5 chr15 69207045 69208735 -34286239 - L1Md_F3 LINE L1 0 6584 4900 2 1113 1112 64 0 0 chr15 69209201 69209342 -34285632 - B1_Mus2 SINE Alu 0 147 7 2 1113 491 241 59 72 chr15 69209206 69209358 -34285616 - B4A SINE B4 -70 222 73 2 1113 4703 56 0 13 chr15 69209670 69210265 -34284709 - L1Md_F2 LINE L1 -2 6580 5994 2 1113 5061 213 57 9 chr15 69210326 69211442 -34283532 - Lx5 LINE L1 0 7050 5882 2 1113 3680 158 42 23 chr15 69211465 69212218 -34282756 + L1_Mur2 LINE L1 5109 5876 -1 2 1113 264 380 94 53 chr15 69212316 69212658 -34282316 + L2b LINE L2 3001 3356 -19 2 1113 259 213 20 50 chr15 69214174 69214273 -34280701 + L1MA8 LINE L1 6044 6139 -152 2 1113 494 302 153 22 chr15 69214307 69214490 -34280484 - B3 SINE B2 -8 208 2 2 1113 360 273 64 7 chr15 69214490 69214630 -34280344 + L1MA8 LINE L1 6126 6273 -18 2 1113 951 240 19 9 chr15 69215369 69215579 -34279395 - B3 SINE B2 -4 212 1 2 1113 653 66 11 0 chr15 69215685 69215776 -34279198 + (TCTA)n Simple_repeat Simple_repeat 1 92 0 2 1113 3080 78 2 0 chr15 69216060 69216457 -34278517 - MTB LTR MaLR -2 398 1 3 1113 212 245 0 0 chr15 69216973 69217022 -34277952 + CT-rich Low_complexity Low_complexity 2 50 0 3 1113 477 98 0 24 chr15 69217346 69217430 -34277544 + RMER19B LTR ERVK 1 82 -820 3 1113 859 239 14 22 chr15 69217421 69217784 -34277190 - RMER19B LTR ERVK -663 239 1 3 1113 211 297 51 119 chr15 69217822 69217998 -34276976 + MIR SINE MIR 99 262 0 3 1113 38272 19 4 6 chr15 69220649 69227042 -34267932 - L1Md_A LINE L1 0 6582 206 3 1113 638 14 0 0 chr15 69227052 69227124 -34267850 - tRNA-Met-i tRNA tRNA -3 72 1 3 1113 392 367 159 26 chr15 69227472 69227824 -34267150 - LTR16D LTR ERVL -31 620 222 3 1113 714 267 56 22 chr15 69227844 69228112 -34266862 + Lx6 LINE L1 7157 7433 -27 3 1113 362 143 0 58 chr15 69228147 69228251 -34266723 + A-rich Low_complexity Low_complexity 1 98 0 3 1113 503 283 158 56 chr15 69228792 69228910 -34266064 - Lx8 LINE L1 -3 7470 7322 3 1113 191 36 36 0 chr15 69228910 69228938 -34266036 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1113 503 283 158 56 chr15 69228938 69229160 -34265814 - Lx8 LINE L1 -152 7321 7096 3 1113 411 38 0 0 chr15 69229217 69229270 -34265704 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1113 811 317 34 9 chr15 69229273 69229623 -34265351 - Lx8 LINE L1 -521 6952 6594 3 1113 640 306 128 15 chr15 69229822 69230151 -34264823 - Lx8 LINE L1 -912 6561 6196 3 1113 279 0 0 0 chr15 69230154 69230185 -34264789 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1113 497 58 14 0 chr15 69230185 69230253 -34264721 + (TA)n Simple_repeat Simple_repeat 2 71 0 3 1113 539 301 46 52 chr15 69230280 69230627 -34264347 + L1_Mur2 LINE L1 4821 5165 -712 3 1113 325 234 0 41 chr15 69230674 69230772 -34264202 + L1_Rod LINE L1 5124 5217 -630 3 1113 26 0 0 0 chr15 69231059 69231085 -34263889 + AT_rich Low_complexity Low_complexity 1 26 0 3 1113 230 282 0 0 chr15 69231956 69232035 -34262939 + MIR SINE MIR 148 229 -39 3 1113 1821 204 66 3 chr15 69233731 69234094 -34260880 - ORR1B1 LTR MaLR -8 386 1 3 1113 3944 42 8 32 chr15 69234192 69234686 -34260288 + LTRIS_Mm LTR ERV1 1 482 0 3 1113 658 158 19 0 chr15 69234820 69234978 -34259996 + (TCTA)n Simple_repeat Simple_repeat 1 161 0 3 1113 189 0 0 0 chr15 69235261 69235282 -34259692 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1113 1098 135 0 0 chr15 69236216 69236394 -34258580 + (GAA)n Simple_repeat Simple_repeat 2 179 0 3 1113 210 150 0 0 chr15 69236394 69236434 -34258540 + (GGA)n Simple_repeat Simple_repeat 2 41 0 3 1113 320 340 66 13 chr15 69236434 69236586 -34258388 + HAL1-3A_ME LINE L1 2284 2443 -415 3 1113 248 93 47 0 chr15 69236595 69236638 -34258336 + (TATATG)n Simple_repeat Simple_repeat 1 45 0 3 1113 462 18 0 0 chr15 69236638 69236693 -34258281 + (GA)n Simple_repeat Simple_repeat 1 55 0 3 1113 447 68 0 0 chr15 69236840 69236899 -34258075 + (A)n Simple_repeat Simple_repeat 1 59 0 3 1113 3336 67 2 2 chr15 69237383 69237816 -34257158 - L1_Mus2 LINE L1 0 6566 6134 3 1113 336 283 50 0 chr15 69238283 69238382 -34256592 - Lx8 LINE L1 -620 6853 6750 3 1113 23583 31 6 37 chr15 69238382 69242341 -34252633 + L1Md_A LINE L1 422 4253 -1630 3 1113 583 256 137 147 chr15 69242343 69242636 -34252338 + MTE2a LTR MaLR 9 298 -81 3 1113 335 255 111 20 chr15 69242644 69242806 -34252168 - L1_Mur3 LINE L1 -1281 4865 4659 3 1113 256 247 34 0 chr15 69242813 69242902 -34252072 - Lx9 LINE L1 -10 7634 7543 3 1113 226 258 8 40 chr15 69242940 69243065 -34251909 + (TTTA)n Simple_repeat Simple_repeat 2 122 0 3 1113 302 171 39 71 chr15 69243076 69243258 -34251716 + (TATAA)n Simple_repeat Simple_repeat 5 180 0 3 1113 314 152 34 0 chr15 69243260 69243319 -34251655 + Lx9 LINE L1 7395 7455 -189 3 1113 226 232 14 0 chr15 69243321 69243390 -34251584 - L1M4 LINE L1 -1443 4703 4634 3 1113 369 0 0 0 chr15 69243445 69243486 -34251488 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1113 929 116 6 0 chr15 69244594 69244767 -34250207 + (GA)n Simple_repeat Simple_repeat 1 174 0 3 1113 319 306 133 77 chr15 69246446 69246613 -34248361 + MLT1C LTR MaLR 1 183 -284 3 1113 479 317 170 4 chr15 69246613 69246854 -34248120 + B4A SINE B4 2 282 -10 3 1113 319 306 133 77 chr15 69246854 69246881 -34248093 + MLT1C LTR MaLR 184 205 -262 3 1113 379 300 110 17 chr15 69247019 69247192 -34247782 + MLT1C LTR MaLR 264 452 -15 3 1113 9628 121 47 9 chr15 69247316 69249524 -34245450 + Lx3_Mus LINE L1 208 2747 -3139 3 1113 4962 99 0 3 chr15 69249525 69250246 -34244728 - L1_Mm LINE L1 -5 5878 5160 3 1113 19969 94 16 26 chr15 69250258 69254562 -34240412 + Lx3_Mus LINE L1 2743 7009 0 3 1113 1297 228 123 18 chr15 69255265 69255605 -34239369 + ORR1B2 LTR MaLR 1 376 -2 3 1113 1615 279 10 7 chr15 69255610 69256025 -34238949 + ORR1B2-int LTR MaLR 4 419 -951 3 1113 584 147 27 9 chr15 69256028 69256138 -34238836 + ORR1B2-int LTR MaLR 1398 1509 0 3 1113 1524 219 51 26 chr15 69256139 69256490 -34238484 + ORR1B2 LTR MaLR 8 367 0 3 1113 234 0 0 0 chr15 69256702 69256728 -34238246 + (CAA)n Simple_repeat Simple_repeat 1 26 0 3 1113 224 275 53 84 chr15 69256779 69256910 -34238064 - L2a LINE L2 -77 3349 3223 3 1113 254 252 10 0 chr15 69257030 69257129 -34237845 + (CAT)n Simple_repeat Simple_repeat 2 101 0 3 1113 502 253 12 58 chr15 69257144 69257316 -34237658 + HAL1-2a_MD LINE L1 2344 2507 -517 3 1113 252 286 137 40 chr15 69257770 69257894 -34237080 + MIRb SINE MIR 123 258 -10 3 1113 3451 15 0 0 chr15 69258239 69258631 -34236343 - L1Md_A LINE L1 0 6582 6191 3 1113 202 338 61 37 chr15 69259067 69259230 -34235744 - MIR SINE MIR -9 253 87 3 1113 249 312 113 106 chr15 69259829 69260112 -34234862 + LTR33 LTR ERVL 218 502 -13 3 1113 22 0 0 0 chr15 69260554 69260576 -34234398 + AT_rich Low_complexity Low_complexity 1 22 0 3 1113 238 379 302 12 chr15 69260910 69261155 -34233819 + MLT2F LTR ERVL 204 519 -144 3 1113 811 184 112 24 chr15 69261200 69261406 -34233568 + URR1A DNA MER1_type 3 226 0 3 1113 773 157 19 70 chr15 69262455 69262613 -34232361 - B1_Mur4 SINE Alu 0 150 1 3 1113 2077 98 27 48 chr15 69263334 69263667 -34231307 - ORR1A2 LTR MaLR 0 327 2 3 1113 531 0 0 0 chr15 69263671 69263730 -34231244 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 1113 421 92 46 69 chr15 69263786 69263961 -34231013 + (TCTCTG)n Simple_repeat Simple_repeat 2 172 0 3 1113 784 306 114 30 chr15 69263970 69264233 -34230741 - B4A SINE B4 -2 290 6 3 1113 205 27 53 26 chr15 69264339 69264377 -34230597 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 3 1113 369 0 0 0 chr15 69265015 69265056 -34229918 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1113 7300 112 34 21 chr15 69265166 69266338 -34228636 - Lx3_Mus LINE L1 -5 7004 5818 3 1113 237 217 14 14 chr15 69266356 69266436 -34228538 - L1_Mur3 LINE L1 -673 5639 5560 3 1113 801 137 0 25 chr15 69266466 69266623 -34228351 + CT-rich Low_complexity Low_complexity 4 156 0 3 1113 601 189 11 33 chr15 69266636 69266817 -34228157 + CT-rich Low_complexity Low_complexity 3 179 0 3 1113 280 239 27 51 chr15 69266823 69266998 -34227976 - L1_Mur3 LINE L1 -821 5476 5308 3 1113 618 109 0 0 chr15 69267465 69267557 -34227417 + (TG)n Simple_repeat Simple_repeat 1 92 0 3 1113 1163 243 24 3 chr15 69268233 69268522 -34226452 + Lx5 LINE L1 6752 7046 -4 3 1113 3568 165 24 62 chr15 69268666 69269331 -34225643 + RLTR26 LTR ERVK 1 640 -2 3 1113 445 358 0 0 chr15 69269331 69269454 -34225520 - RSINE1 SINE B4 -40 125 3 3 1113 1586 300 15 5 chr15 69270188 69270580 -34224394 - MTD LTR MaLR 0 419 24 3 1113 1148 68 0 0 chr15 69270592 69270739 -34224235 + B1_Mus1 SINE Alu 1 147 -1 3 1113 458 139 12 0 chr15 69270745 69270831 -34224143 + (TAGA)n Simple_repeat Simple_repeat 4 90 0 3 1113 549 315 107 18 chr15 69272753 69272821 -34222153 + Lx8 LINE L1 6338 6413 -1060 3 1113 441 0 0 0 chr15 69272821 69272870 -34222104 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 1113 549 315 107 18 chr15 69272870 69273128 -34221846 + Lx8 LINE L1 6414 6693 -780 3 1113 893 316 58 43 chr15 69273128 69273644 -34221330 + Lx8 LINE L1 6946 7469 -4 3 1113 347 296 28 0 chr15 69273653 69273795 -34221179 + Lx8 LINE L1 5780 5925 -1548 3 1113 399 339 37 0 chr15 69274171 69274280 -34220694 + RSINE1 SINE B4 7 119 -46 3 1113 189 0 0 0 chr15 69274309 69274330 -34220644 + (TCTG)n Simple_repeat Simple_repeat 4 24 0 3 1113 258 351 13 13 chr15 69275125 69275275 -34219699 + Lx9 LINE L1 7178 7327 -317 3 1113 23 33 0 0 chr15 69275359 69275389 -34219585 + AT_rich Low_complexity Low_complexity 1 30 0 3 1113 1122 78 0 0 chr15 69275491 69275632 -34219342 + B1_Mm SINE Alu 2 142 -5 3 1113 210 37 0 0 chr15 69275638 69275665 -34219309 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1113 423 0 0 0 chr15 69277551 69277598 -34217376 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 1113 426 20 0 0 chr15 69277822 69277873 -34217101 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1113 303 279 143 67 chr15 69278064 69278359 -34216615 + MTE2b LTR MaLR 1 345 -34 3 1113 1232 298 82 27 chr15 69278411 69279178 -34215796 - L1MA9 LINE L1 -75 6237 5429 3 1113 216 86 0 0 chr15 69279201 69279236 -34215738 + (T)n Simple_repeat Simple_repeat 1 35 0 3 1113 4022 135 28 22 chr15 69279240 69279915 -34215059 + Lx LINE L1 5970 6648 -6 3 1113 2571 244 95 94 chr15 69280086 69281105 -34213869 - RMER1B Other Other -3 1063 44 3 1113 43 20 0 0 chr15 69281576 69281626 -34213348 + AT_rich Low_complexity Low_complexity 1 50 0 3 1113 219 286 0 0 chr15 69281698 69281782 -34213192 + A-rich Low_complexity Low_complexity 1 84 0 3 1113 321 267 73 33 chr15 69281783 69281934 -34213040 - Lx7 LINE L1 -359 7337 7181 3 1113 2512 298 26 38 chr15 69281979 69282823 -34212151 + Lx7 LINE L1 6267 7100 -596 3 1113 244 209 96 32 chr15 69282846 69282940 -34212034 - L1MA9 LINE L1 -752 5419 5320 3 1113 488 79 0 13 chr15 69283927 69284004 -34210970 + L1Md_F2 LINE L1 6495 6570 -12 3 1113 3774 133 67 14 chr15 69284024 69284664 -34210310 + RLTR25A LTR ERVK 4 661 -442 3 1113 225 172 15 45 chr15 69284677 69284744 -34210230 + Lx2B LINE L1 6936 7000 0 3 1113 892 216 77 30 chr15 69284756 69284990 -34209984 + RLTR25A LTR ERVK 609 853 -175 3 1113 768 233 117 62 chr15 69285369 69285493 -34209481 + RLTR25B LTR ERVK 757 889 -139 3 1113 222 37 0 0 chr15 69285493 69285520 -34209454 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1113 234 0 0 0 chr15 69285520 69285545 -34209429 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 1113 768 233 117 62 chr15 69285545 69285675 -34209299 + RLTR25B LTR ERVK 890 1025 -3 3 1113 1964 248 72 50 chr15 69286250 69286849 -34208125 - RLTR17 LTR ERVK -80 612 1 4 1113 230 302 91 10 chr15 69287613 69287725 -34207249 + MIRb SINE MIR 80 200 -68 4 1113 462 65 0 0 chr15 69287725 69287787 -34207187 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 1113 410 114 0 14 chr15 69288654 69288725 -34206249 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 4 1113 3686 218 101 40 chr15 69290133 69291070 -34203904 - RMER1B Other Other -27 1039 45 4 1113 496 351 60 24 chr15 69291400 69291731 -34203243 + ORR1D2 LTR MaLR 1 355 -24 4 1113 204 40 0 0 chr15 69293709 69293734 -34201240 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1113 502 319 77 0 chr15 69293756 69293925 -34201049 - B4A SINE B4 0 292 111 4 1113 292 371 79 17 chr15 69295618 69295796 -34199178 + ORR1E LTR MaLR 5 193 -166 4 1113 361 385 91 0 chr15 69296036 69296301 -34198673 - L1MC4a LINE L1 -2018 5864 5576 4 1113 227 371 87 12 chr15 69297269 69297430 -34197544 + MER5A DNA MER1_type 1 173 -16 4 1113 495 354 63 9 chr15 69297794 69298125 -34196849 + Lx8 LINE L1 7015 7363 -110 4 1113 415 358 6 6 chr15 69298481 69298658 -34196316 + (CA)n Simple_repeat Simple_repeat 2 178 0 4 1113 237 139 0 0 chr15 69299529 69299572 -34195402 + (A)n Simple_repeat Simple_repeat 1 43 0 4 1113 542 90 45 0 chr15 69300425 69300536 -34194438 + (TCTA)n Simple_repeat Simple_repeat 2 117 0 4 1113 1073 309 13 0 chr15 69300548 69300846 -34194128 + Lx8 LINE L1 6200 6501 -972 4 1113 429 250 41 16 chr15 69300847 69300969 -34194005 + Lx8 LINE L1 6645 6769 -704 4 1113 274 302 147 0 chr15 69301923 69302052 -34192922 - MIRc SINE MIR -71 197 50 4 1113 837 121 12 6 chr15 69302330 69302496 -34192478 + (TA)n Simple_repeat Simple_repeat 1 167 0 4 1113 703 180 16 8 chr15 69302574 69302703 -34192271 - B1_Mus2 SINE Alu -8 139 10 4 1113 1307 291 63 58 chr15 69303677 69303734 -34191240 - L1_Mur1 LINE L1 -1451 4435 4375 4 1113 411 56 0 0 chr15 69303734 69303788 -34191186 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 1113 1307 291 63 58 chr15 69303788 69303824 -34191150 - L1_Mur1 LINE L1 -1512 4374 4325 4 1113 1983 84 87 0 chr15 69303824 69304111 -34190863 - L1_Mus3 LINE L1 -7 6631 6320 4 1113 1746 280 41 56 chr15 69304111 69304289 -34190685 - L1_Mur3 LINE L1 -1566 4314 4130 4 1113 549 68 0 0 chr15 69304289 69304363 -34190611 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 4 1113 1061 86 13 9 chr15 69304365 69304591 -34190383 + (TTTC)n Simple_repeat Simple_repeat 1 226 0 4 1113 1746 280 41 56 chr15 69304591 69304610 -34190364 - L1_Mur3 LINE L1 -1751 4129 4122 4 1113 874 92 0 21 chr15 69304610 69304754 -34190220 - L1Md_F2 LINE L1 0 6582 6442 4 1113 1746 279 45 45 chr15 69304754 69305410 -34189564 - L1_Mur3 LINE L1 -1759 4121 3470 4 1113 219 36 0 0 chr15 69305413 69305441 -34189533 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 4 1113 419 291 37 11 chr15 69305603 69305794 -34189180 - L1_Mur3 LINE L1 -2407 3473 3278 4 1113 227 256 12 37 chr15 69305798 69305879 -34189095 - L1_Mm LINE L1 -2682 3201 3123 4 1113 315 0 0 0 chr15 69305924 69305959 -34189015 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1113 183 100 0 0 chr15 69306075 69306105 -34188869 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1113 528 342 74 0 chr15 69306135 69306325 -34188649 - B3 SINE B2 -6 210 7 4 1113 1004 67 29 7 chr15 69306679 69306815 -34188159 - RLTR45 LTR ERVK -1 481 343 4 1113 291 220 52 52 chr15 69306835 69306950 -34188024 + L1_Mur3 LINE L1 4061 4175 -1705 4 1113 1743 197 77 21 chr15 69307194 69307572 -34187402 + MTB_Mm LTR MaLR 9 407 0 4 1113 216 0 0 0 chr15 69307618 69307642 -34187332 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1113 268 277 29 19 chr15 69307700 69307803 -34187171 + ERVL-E-int LTR ERVL 437 540 -5127 4 1113 1645 162 7 18 chr15 69308620 69308903 -34186071 - Lx4A LINE L1 -2 7056 6777 4 1113 451 187 9 9 chr15 69309174 69309287 -34185687 + (TA)n Simple_repeat Simple_repeat 1 113 0 4 1113 203 190 0 17 chr15 69309342 69309401 -34185573 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 1113 460 265 46 74 chr15 69309405 69309621 -34185353 - L1MB1 LINE L1 -12 6156 5947 4 1113 671 320 101 8 chr15 69310515 69310773 -34184201 + Lx8 LINE L1 7039 7320 -153 4 1113 2552 59 0 12 chr15 69312216 69312544 -34182430 - L1_Mus1 LINE L1 0 6567 6244 4 1113 554 305 16 28 chr15 69312571 69312753 -34182221 + B3A SINE B2 3 182 -16 4 1113 347 314 135 0 chr15 69314963 69315119 -34179855 - MER46C DNA MER2_type -80 258 82 4 1113 183 319 150 63 chr15 69315306 69315433 -34179541 - MIRb SINE MIR -121 147 10 4 1113 199 87 43 21 chr15 69315514 69315561 -34179413 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 4 1113 1131 76 7 0 chr15 69315561 69315706 -34179268 - B1_Mus1 SINE Alu -1 147 2 4 1113 546 297 39 40 chr15 69315732 69316022 -34178952 + ORR1E LTR MaLR 6 344 -15 4 1113 1586 203 67 170 chr15 69316701 69317295 -34177679 + RMER16 LTR ERVK 1 533 0 4 1113 931 318 89 21 chr15 69317513 69318024 -34176950 - Lx8 LINE L1 -909 6564 6157 4 1113 1949 300 39 20 chr15 69318059 69318749 -34176225 + Lx8 LINE L1 6584 7286 -187 4 1113 825 380 43 24 chr15 69319339 69319808 -34175166 - MLT2B1 LTR ERVL 0 520 43 4 1113 255 209 117 3 chr15 69320494 69320575 -34174399 + MIRb SINE MIR 120 201 -61 4 1113 480 231 107 9 chr15 69320749 69320890 -34174084 + B3A SINE B2 2 158 -35 4 1113 270 0 0 0 chr15 69320890 69320920 -34174054 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1113 308 258 118 35 chr15 69320920 69320947 -34174027 + B2_Mm1a SINE B2 159 184 -9 4 1113 31 44 0 0 chr15 69320962 69321007 -34173967 + AT_rich Low_complexity Low_complexity 1 45 0 4 1113 206 277 0 0 chr15 69321008 69321055 -34173919 - L2a LINE L2 -2 3424 3378 4 1113 24 0 0 0 chr15 69321152 69321176 -34173798 + AT_rich Low_complexity Low_complexity 1 24 0 4 1113 285 109 0 0 chr15 69321272 69321318 -34173656 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1113 9618 185 53 79 chr15 69321336 69321362 -34173612 - L1_Mur2 LINE L1 -434 5443 5419 4 1113 3781 57 6 0 chr15 69321362 69321834 -34173140 + L1Md_F3 LINE L1 6096 6570 -14 4 1113 9618 185 53 79 chr15 69321834 69322132 -34172842 - L1_Mur2 LINE L1 -459 5418 5121 4 1113 264 30 0 0 chr15 69322132 69322165 -34172809 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 1113 9618 185 53 79 chr15 69322165 69322674 -34172300 - L1_Mur2 LINE L1 -757 5120 4628 4 1113 192 77 0 0 chr15 69322674 69322700 -34172274 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 1113 9618 185 53 79 chr15 69322700 69323782 -34171192 - L1_Mur2 LINE L1 -1250 4627 3519 4 1113 3863 72 0 0 chr15 69323782 69324284 -34170690 + L1Md_F2 LINE L1 6080 6581 -1 4 1113 9618 185 53 79 chr15 69324284 69324380 -34170594 - L1_Mur2 LINE L1 -2359 3518 3488 4 1113 207 0 0 0 chr15 69324380 69324403 -34170571 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 1113 9618 185 53 79 chr15 69324403 69324908 -34170066 - L1_Mur2 LINE L1 -2390 3487 2992 4 1113 1967 186 23 0 chr15 69324903 69325302 -34169672 + L1_Mur2 LINE L1 2586 2993 -2884 4 1113 31 26 0 0 chr15 69325439 69325477 -34169497 + AT_rich Low_complexity Low_complexity 1 38 0 4 1113 183 324 83 41 chr15 69325660 69325805 -34169169 - MIRb SINE MIR -84 184 34 4 1113 3967 160 45 8 chr15 69326648 69327377 -34167597 + RMER6A LTR ERVK 1 756 0 4 1113 190 286 18 18 chr15 69329110 69329167 -34165807 - MIR SINE MIR -166 96 40 4 1113 21 71 0 0 chr15 69329279 69329321 -34165653 + AT_rich Low_complexity Low_complexity 1 42 0 4 1113 326 362 47 16 chr15 69331391 69331520 -34163454 + MER58A DNA MER1_type 13 145 -79 4 1113 458 75 15 0 chr15 69331697 69331764 -34163210 + (TC)n Simple_repeat Simple_repeat 2 69 0 4 1113 892 206 92 5 chr15 69331767 69331962 -34163012 + ORR1D1 LTR MaLR 163 374 0 4 1113 5115 232 90 14 chr15 69331978 69332545 -34162429 + ORR1D1-int LTR MaLR 22 619 -751 4 1113 1008 25 0 0 chr15 69332545 69332664 -34162310 + (GAAA)n Simple_repeat Simple_repeat 4 122 0 4 1113 5115 232 90 14 chr15 69332664 69333347 -34161627 + ORR1D1-int LTR MaLR 620 1367 -3 4 1113 1317 219 15 76 chr15 69333347 69333687 -34161287 + ORR1D1 LTR MaLR 9 327 -47 4 1113 1255 300 78 17 chr15 69334182 69334707 -34160267 + Tigger13a DNA MER2_type 209 765 -6 4 1113 196 304 35 18 chr15 69334846 69334903 -34160071 + L2b LINE L2 3280 3337 -38 4 1113 782 316 57 27 chr15 69334997 69335332 -34159642 + L2c LINE L2 2536 2880 -539 4 1113 180 200 47 62 chr15 69335299 69335363 -34159611 + L2c LINE L2 3325 3387 0 4 1113 1246 269 45 10 chr15 69335860 69336172 -34158802 - ORR1D2 LTR MaLR -47 323 1 4 1113 409 265 104 42 chr15 69336590 69336846 -34158128 + MLT2D LTR ERVL 96 500 -56 4 1114 2684 68 23 0 chr15 69337154 69337505 -34157469 - L1_Mus2 LINE L1 0 6566 6208 4 1114 393 219 25 78 chr15 69337542 69337837 -34157137 + RMER17D2 LTR ERVK 1 483 -326 4 1114 191 324 73 0 chr15 69337953 69338021 -34156953 + L2c LINE L2 3270 3342 -45 4 1114 1110 292 24 5 chr15 69338100 69338472 -34156502 + MTE2b LTR MaLR 1 379 0 4 1114 204 269 73 65 chr15 69338528 69338651 -34156323 + L2 LINE L2 2429 2552 -867 4 1114 25 31 0 0 chr15 69338943 69338975 -34155999 + AT_rich Low_complexity Low_complexity 1 32 0 4 1114 198 71 0 0 chr15 69340032 69340060 -34154914 + (TTG)n Simple_repeat Simple_repeat 2 29 0 4 1114 218 347 8 68 chr15 69340998 69341131 -34153843 + MIRb SINE MIR 127 251 -17 4 1114 576 186 0 0 chr15 69341161 69341274 -34153700 + (TA)n Simple_repeat Simple_repeat 2 114 0 4 1114 215 278 41 14 chr15 69341353 69341426 -34153548 - MIRb SINE MIR -154 114 40 4 1114 420 340 82 34 chr15 69341431 69341638 -34153336 + MER20 DNA MER1_type 3 219 0 4 1114 527 254 116 21 chr15 69341917 69342095 -34152879 - B3 SINE B2 -4 191 3 4 1114 7725 57 0 2 chr15 69342342 69343798 -34151176 - L1Md_F2 LINE L1 0 6582 5130 4 1114 22 0 0 0 chr15 69343904 69343926 -34151048 + AT_rich Low_complexity Low_complexity 1 22 0 4 1114 2787 179 30 36 chr15 69343931 69344492 -34150482 - Lx4A LINE L1 0 7058 6501 4 1114 6682 75 8 25 chr15 69344492 69344716 -34150258 + L1_Mus1 LINE L1 5625 5848 -719 4 1114 2284 81 71 6 chr15 69344716 69345041 -34149933 + ORR1A1 LTR MaLR 1 346 0 4 1114 13649 59 11 1 chr15 69345041 69346816 -34148158 + ORR1A1-int LTR MaLR 1 1792 0 4 1114 2369 65 61 61 chr15 69346816 69347162 -34147812 + ORR1A1 LTR MaLR 1 346 0 4 1114 6682 75 8 25 chr15 69347162 69347893 -34147081 + L1_Mus1 LINE L1 5849 6564 -3 4 1114 5042 136 26 9 chr15 69347912 69349204 -34145770 - Lx4A LINE L1 -559 6499 5185 4 1114 239 320 0 29 chr15 69349520 69349623 -34145351 + (CATA)n Simple_repeat Simple_repeat 4 103 0 4 1114 690 314 26 0 chr15 69349680 69349836 -34145138 + RSINE1 SINE B4 4 163 -2 4 1114 492 236 58 45 chr15 69349852 69350003 -34144971 + MLT1A0 LTR MaLR 8 160 -205 4 1114 219 214 0 0 chr15 69350003 69350045 -34144929 + ID4_ SINE ID 2 43 -40 4 1114 36 70 0 0 chr15 69350365 69350436 -34144538 + AT_rich Low_complexity Low_complexity 1 71 0 4 1114 26 50 0 0 chr15 69350467 69350507 -34144467 + AT_rich Low_complexity Low_complexity 1 40 0 5 1114 329 394 23 42 chr15 69350557 69350774 -34144200 + MLT1G LTR MaLR 4 216 -375 5 1114 567 43 0 0 chr15 69350809 69350879 -34144095 + (TA)n Simple_repeat Simple_repeat 1 70 0 5 1114 1628 176 35 0 chr15 69352563 69352875 -34142099 - Lx2 LINE L1 -6 6991 6669 5 1114 378 0 0 0 chr15 69353076 69353118 -34141856 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1114 362 223 64 0 chr15 69353475 69353569 -34141405 + Lx8 LINE L1 7011 7110 -363 5 1114 692 199 487 70 chr15 69355678 69355840 -34139134 + Lx9 LINE L1 7097 7321 -323 5 1114 233 29 29 0 chr15 69355840 69355874 -34139100 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 5 1114 692 199 62 102 chr15 69355874 69356036 -34138938 + Lx9 LINE L1 7322 7482 -162 5 1114 456 19 0 0 chr15 69356038 69356091 -34138883 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1114 438 36 0 0 chr15 69356182 69356238 -34138736 - L1Md_F3 LINE L1 -527 6057 6002 5 1114 631 79 0 26 chr15 69356238 69356380 -34138594 + L1Md_F3 LINE L1 6471 6584 0 5 1114 292 316 56 62 chr15 69357931 69358110 -34136864 + MIRb SINE MIR 19 196 -72 5 1114 246 309 71 0 chr15 69358751 69358835 -34136139 - L2 LINE L2 -538 2881 2792 5 1114 237 275 55 62 chr15 69358842 69358970 -34136004 - L2 LINE L2 -606 2813 2687 5 1114 366 352 86 57 chr15 69359203 69359447 -34135527 - B4 SINE B4 -15 277 27 5 1114 220 321 122 39 chr15 69361547 69361751 -34133223 - L2c LINE L2 -88 3299 3079 5 1114 441 0 0 0 chr15 69362831 69362880 -34132094 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 1114 30 59 0 0 chr15 69362957 69363008 -34131966 + AT_rich Low_complexity Low_complexity 1 51 0 5 1114 189 0 0 0 chr15 69363838 69363859 -34131115 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1114 22 35 0 0 chr15 69364168 69364197 -34130777 + AT_rich Low_complexity Low_complexity 1 29 0 5 1114 7125 95 2 9 chr15 69364274 69366069 -34128905 - L1_Mus1 LINE L1 0 6567 4793 5 1114 249 336 16 39 chr15 69366140 69366267 -34128707 - RMER15 LTR ERVL -158 417 294 5 1114 187 250 0 0 chr15 69366541 69366581 -34128393 + L4 LINE RTE 1095 1134 -895 5 1114 564 364 0 0 chr15 69366875 69367029 -34127945 - RSINE1 SINE B4 0 165 12 5 1114 333 0 0 0 chr15 69367029 69367066 -34127908 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1114 905 73 0 39 chr15 69367066 69367195 -34127779 - B1_Mm SINE Alu -23 124 1 5 1114 436 216 0 105 chr15 69367092 69367216 -34127758 - MT2B LTR ERVL -344 257 147 5 1114 513 51 128 0 chr15 69367230 69367308 -34127666 - L1_Mus1 LINE L1 -205 6362 6275 5 1114 1505 83 29 0 chr15 69367308 69367513 -34127461 + L1_Mus1 LINE L1 6356 6566 -1 5 1114 2031 109 33 3 chr15 69368219 69368523 -34126451 + Lx3_Mus LINE L1 6686 6998 -11 5 1114 274 318 38 49 chr15 69369293 69369558 -34125416 - L1MB1 LINE L1 -23 6311 6050 5 1114 530 301 109 13 chr15 69369702 69370170 -34124804 - L1MB1 LINE L1 -337 5831 5319 5 1114 252 277 6 0 chr15 69370174 69370334 -34124640 + CT-rich Low_complexity Low_complexity 1 161 0 5 1114 431 310 72 16 chr15 69370432 69370753 -34124221 - L1MB1 LINE L1 -987 5153 4815 5 1114 1061 150 121 0 chr15 69370756 69370963 -34124011 + L1VL2 LINE L1 336 567 -5768 5 1114 12016 167 17 14 chr15 69370974 69373376 -34121598 + L1_Mur2 LINE L1 2762 5171 -706 5 1114 2591 140 10 0 chr15 69373379 69373787 -34121187 + Lx LINE L1 6237 6648 -6 5 1114 945 140 0 17 chr15 69373818 69373999 -34120975 + GA-rich Low_complexity Low_complexity 3 180 0 5 1114 576 0 0 0 chr15 69374000 69374064 -34120910 + (GAGAA)n Simple_repeat Simple_repeat 1 64 0 5 1114 406 270 44 18 chr15 69374065 69374178 -34120796 - MT2B LTR ERVL -233 368 253 5 1114 342 282 63 16 chr15 69374170 69374296 -34120678 - MT2B LTR ERVL -401 132 1 5 1114 320 241 8 59 chr15 69374521 69374640 -34120334 - L1MB1 LINE L1 -1983 4157 4045 5 1114 396 0 0 0 chr15 69374640 69374684 -34120290 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1114 210 353 20 0 chr15 69374689 69374842 -34120132 + (TA)n Simple_repeat Simple_repeat 1 156 0 5 1114 228 135 0 0 chr15 69375899 69375936 -34119038 + (A)n Simple_repeat Simple_repeat 1 37 0 5 1114 2361 221 71 5 chr15 69376556 69377216 -34117758 - Lx9 LINE L1 0 7644 6941 5 1114 805 159 73 6 chr15 69377235 69377400 -34117574 - Lx9 LINE L1 -752 6892 6717 5 1114 252 0 0 0 chr15 69378571 69378599 -34116375 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 1114 24 32 0 0 chr15 69378743 69378774 -34116200 + AT_rich Low_complexity Low_complexity 1 31 0 5 1114 471 122 0 0 chr15 69379075 69379165 -34115809 + (TG)n Simple_repeat Simple_repeat 2 91 0 5 1114 207 69 0 0 chr15 69379168 69379197 -34115777 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 1114 575 60 12 0 chr15 69379206 69379290 -34115684 + (TG)n Simple_repeat Simple_repeat 2 86 0 5 1114 227 289 161 15 chr15 69379290 69379420 -34115554 - MLT2B4 LTR ERVL -78 478 330 5 1114 507 17 0 0 chr15 69380325 69380385 -34114589 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 1114 713 231 83 38 chr15 69380415 69380703 -34114271 + Lx9 LINE L1 7337 7637 -7 5 1114 564 373 98 22 chr15 69380974 69381569 -34113405 - L1ME3A LINE L1 -15 6158 5519 5 1114 331 316 58 19 chr15 69381679 69381834 -34113140 + MIRb SINE MIR 92 252 -16 5 1114 21 0 0 0 chr15 69381847 69381868 -34113106 + AT_rich Low_complexity Low_complexity 1 21 0 5 1114 251 312 88 44 chr15 69381868 69381982 -34112992 - PB1D9 SINE Alu 0 120 2 5 1114 223 317 18 98 chr15 69383080 69383192 -34111782 + L2c LINE L2 3254 3356 -31 5 1114 234 224 14 56 chr15 69383803 69383874 -34111100 - MIR SINE MIR -62 200 133 5 1114 218 344 62 0 chr15 69384122 69384218 -34110756 - L2c LINE L2 -3 3384 3283 5 1114 485 261 8 63 chr15 69384492 69384619 -34110355 - PB1D7 SINE Alu 0 120 1 5 1114 1259 201 49 42 chr15 69385126 69385412 -34109562 - ORR1C2 LTR MaLR -95 289 2 5 1114 303 325 30 35 chr15 69385965 69386134 -34108840 + Charlie10b DNA MER1_type 23 190 -52 5 1114 443 269 131 0 chr15 69386351 69386526 -34108448 + MIRc SINE MIR 63 260 -8 5 1114 473 294 57 81 chr15 69386657 69386868 -34108106 + RMER10B LTR ERVL 147 352 -46 5 1114 3753 130 51 12 chr15 69387100 69387769 -34107205 - Lx3C LINE L1 -26 6950 6256 5 1114 4655 133 1 34 chr15 69387747 69388701 -34106273 - Lx3C LINE L1 -936 6040 5113 5 1114 1104 109 0 0 chr15 69388731 69388878 -34106096 + B1_Mus1 SINE Alu 1 147 -1 5 1114 1527 308 65 31 chr15 69388879 69389435 -34105539 + Lx5 LINE L1 6471 7045 -5 5 1114 675 301 76 126 chr15 69390092 69390594 -34104380 + RMER5 LTR ERV1 1 477 -57 5 1114 213 65 0 0 chr15 69390595 69390626 -34104348 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1114 297 0 0 0 chr15 69390874 69390907 -34104067 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1114 236 333 0 0 chr15 69392171 69392249 -34102725 + (TATATG)n Simple_repeat Simple_repeat 3 80 0 5 1114 21 0 0 0 chr15 69392310 69392331 -34102643 + AT_rich Low_complexity Low_complexity 1 21 0 5 1114 592 333 9 79 chr15 69392340 69392568 -34102406 - B4 SINE B4 -78 214 3 5 1114 736 305 52 25 chr15 69393099 69393385 -34101589 + MLT1A0 LTR MaLR 5 298 -67 5 1114 725 261 31 5 chr15 69394934 69395130 -34099844 - ORR1D2 LTR MaLR 0 370 170 5 1114 477 0 0 0 chr15 69396048 69396101 -34098873 + (GA)n Simple_repeat Simple_repeat 2 54 0 5 1114 240 119 33 17 chr15 69397292 69397352 -34097622 + (TAA)n Simple_repeat Simple_repeat 2 62 0 5 1114 21 82 0 0 chr15 69397352 69397401 -34097573 + AT_rich Low_complexity Low_complexity 1 49 0 5 1114 184 91 45 0 chr15 69397850 69397894 -34097080 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 5 1114 35 24 0 0 chr15 69398429 69398471 -34096503 + AT_rich Low_complexity Low_complexity 1 42 0 5 1114 283 238 48 48 chr15 69398517 69398601 -34096373 + MER58B DNA MER1_type 241 324 -17 5 1114 23 0 0 0 chr15 69399860 69399883 -34095091 + AT_rich Low_complexity Low_complexity 1 23 0 5 1114 14896 18 4 0 chr15 69400367 69402053 -34092921 + IAPEz-int LTR ERVK 4789 6481 0 5 1114 22 0 0 0 chr15 69402545 69402567 -34092407 + AT_rich Low_complexity Low_complexity 1 22 0 5 1114 9655 132 39 41 chr15 69402640 69405406 -34089568 + Lx4A LINE L1 4265 7056 -2 5 1114 27 0 0 0 chr15 69405409 69405436 -34089538 + AT_rich Low_complexity Low_complexity 1 27 0 5 1114 183 42 0 0 chr15 69407095 69407119 -34087855 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1114 584 330 63 59 chr15 69407203 69407506 -34087468 - MLT1F2 LTR MaLR 0 560 257 5 1114 24 32 0 0 chr15 69408167 69408198 -34086776 + AT_rich Low_complexity Low_complexity 1 31 0 5 1114 744 308 10 95 chr15 69408656 69408753 -34086221 + MTEb LTR MaLR 3 75 -304 5 1114 477 0 0 0 chr15 69408753 69408806 -34086168 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1114 744 308 10 95 chr15 69408806 69409120 -34085854 + MTEb LTR MaLR 76 379 0 5 1114 346 323 67 18 chr15 69410253 69410417 -34084557 - HAL1-3A_ME LINE L1 -403 2455 2284 5 1114 290 241 22 33 chr15 69410420 69410510 -34084464 + CT-rich Low_complexity Low_complexity 5 93 0 5 1114 195 222 0 0 chr15 69410517 69410562 -34084412 + (TATG)n Simple_repeat Simple_repeat 2 46 0 5 1114 294 359 32 13 chr15 69410565 69410720 -34084254 - B4A SINE B4 -2 290 133 5 1114 182 269 28 69 chr15 69410739 69410811 -34084163 - MIR SINE MIR -175 87 19 5 1114 215 156 67 0 chr15 69411233 69411278 -34083696 + T-rich Low_complexity Low_complexity 5 52 0 5 1114 287 167 15 0 chr15 69411278 69411344 -34083630 + CT-rich Low_complexity Low_complexity 2 68 0 5 1114 666 303 39 5 chr15 69411679 69411897 -34083077 + Lx8 LINE L1 6780 7014 -630 5 1114 737 290 93 6 chr15 69412555 69412919 -34082055 - L1MA6 LINE L1 -115 6185 5790 5 1114 727 289 12 63 chr15 69413809 69414141 -34080833 + L1M2 LINE L1 4651 5003 -1140 5 1114 2544 260 73 39 chr15 69414320 69415151 -34079823 + Lx8 LINE L1 6614 7473 0 5 1114 382 173 37 46 chr15 69415705 69415814 -34079160 - Lx9 LINE L1 -5 7639 7532 5 1114 31 0 0 0 chr15 69415814 69415845 -34079129 + AT_rich Low_complexity Low_complexity 1 31 0 5 1114 2797 223 77 20 chr15 69415846 69415949 -34079025 - Lx4B LINE L1 -5 7053 6954 6 1114 294 29 0 0 chr15 69415949 69415984 -34078990 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1114 3132 202 19 5 chr15 69415984 69416058 -34078916 - Lx5 LINE L1 -155 6895 6822 6 1114 378 0 0 0 chr15 69416058 69416100 -34078874 + (CAGG)n Simple_repeat Simple_repeat 1 42 0 6 1114 3132 202 19 5 chr15 69416100 69416613 -34078361 - Lx5 LINE L1 -229 6821 6301 6 1114 2267 219 57 18 chr15 69416611 69417119 -34077855 + Lx5 LINE L1 5796 6323 -727 6 1114 1516 219 9 117 chr15 69417152 69417597 -34077377 - Lx9 LINE L1 -175 7469 7073 5 1114 1686 173 111 3 chr15 69417602 69417926 -34077048 - ORR1B2 LTR MaLR -8 359 1 6 1114 963 188 55 20 chr15 69417974 69418175 -34076799 + L1_Rod LINE L1 4826 5033 -814 6 1114 21 0 0 0 chr15 69421256 69421277 -34073697 + AT_rich Low_complexity Low_complexity 1 21 0 6 1114 564 348 11 11 chr15 69421295 69421484 -34073490 - B3A SINE B2 -2 196 8 6 1114 743 181 0 0 chr15 69421529 69421662 -34073312 - B1_Mus1 SINE Alu 0 148 16 6 1114 239 270 0 101 chr15 69421574 69421673 -34073301 - MT2B LTR ERVL -344 257 169 6 1114 289 156 26 0 chr15 69422399 69422476 -34072498 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 6 1114 309 313 48 12 chr15 69422617 69422701 -34072273 + B1F SINE Alu 3 89 -60 6 1114 201 39 0 0 chr15 69422794 69422820 -34072154 + (CAAT)n Simple_repeat Simple_repeat 2 27 0 6 1114 420 349 62 37 chr15 69423589 69423991 -34070983 - L2 LINE L2 -1102 2317 1906 6 1114 457 247 12 0 chr15 69424107 69424273 -34070701 + CT-rich Low_complexity Low_complexity 3 170 0 6 1114 191 114 29 0 chr15 69424607 69424642 -34070332 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1114 218 29 59 0 chr15 69425151 69425185 -34069789 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 6 1114 215 328 0 0 chr15 69425611 69425675 -34069299 + (CA)n Simple_repeat Simple_repeat 1 64 0 6 1114 448 347 17 52 chr15 69426669 69426900 -34068074 + MIRb SINE MIR 32 254 -14 6 1114 4456 34 0 7 chr15 69427332 69427906 -34067068 + L1Md_F2 LINE L1 6046 6582 0 6 1114 430 303 33 39 chr15 69429904 69430086 -34064888 - HERV16-int LTR ERVL -1465 3531 3351 6 1114 401 316 98 29 chr15 69430594 69430900 -34064074 - L1MEc LINE L1 -3893 2507 2181 6 1114 3330 58 0 9 chr15 69431213 69431646 -34063328 - L1Md_F3 LINE L1 -9 6575 6147 6 1114 401 311 36 10 chr15 69431825 69432020 -34062954 - Lx9 LINE L1 -210 7434 7235 6 1114 324 319 52 21 chr15 69432031 69432223 -34062751 - L1MEc LINE L1 -4560 1855 1658 6 1114 720 192 39 0 chr15 69432589 69432719 -34062255 - B1_Mur4 SINE Alu -13 137 3 6 1114 21 82 0 0 chr15 69432725 69432774 -34062200 + AT_rich Low_complexity Low_complexity 1 49 0 6 1114 24 67 0 0 chr15 69433603 69433648 -34061326 + AT_rich Low_complexity Low_complexity 1 45 0 6 1114 353 319 53 71 chr15 69434784 69435146 -34059828 - MTEb LTR MaLR -22 357 7 6 1114 367 296 0 0 chr15 69435594 69435692 -34059282 - MER90a LTR ERV1 -147 467 370 6 1114 542 262 8 8 chr15 69436295 69436422 -34058552 + MT2A LTR ERVL 3 129 -404 6 1114 302 222 0 16 chr15 69436412 69436476 -34058498 + MT2A LTR ERVL 86 148 -385 6 1114 265 238 16 16 chr15 69436612 69436676 -34058298 + MT2A LTR ERVL 241 304 -229 6 1114 4701 144 8 12 chr15 69436706 69437897 -34057077 - Lx2 LINE L1 -808 6189 5010 6 1114 7548 114 2 2 chr15 69441138 69442608 -34052366 - L1_Mus4 LINE L1 0 6636 5167 6 1114 2342 190 36 28 chr15 69442608 69443102 -34051872 + L1_Mur2 LINE L1 4696 5193 -684 6 1114 189 107 0 0 chr15 69444769 69444797 -34050177 + (TTC)n Simple_repeat Simple_repeat 3 30 0 6 1114 246 326 0 82 chr15 69445507 69445604 -34049370 + ID_B1 SINE B4 41 129 -95 6 1114 227 246 25 76 chr15 69445851 69445930 -34049044 - LTR78 LTR ERV1 -1229 75 1 6 1114 288 0 0 0 chr15 69446440 69446472 -34048502 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1114 728 227 69 31 chr15 69446573 69446732 -34048242 - RSINE1 SINE B4 0 165 1 6 1114 25 31 0 0 chr15 69446806 69446838 -34048136 + AT_rich Low_complexity Low_complexity 1 32 0 6 1114 837 300 99 29 chr15 69447029 69447626 -34047348 - L1MD1 LINE L1 -266 5976 5338 6 1114 520 236 63 9 chr15 69448122 69448233 -34046741 - B3A SINE B2 -80 118 2 6 1114 258 367 119 30 chr15 69450898 69451235 -34043739 - L2 LINE L2 -552 2867 2501 6 1114 22 0 0 0 chr15 69451584 69451606 -34043368 + AT_rich Low_complexity Low_complexity 1 22 0 6 1114 6501 75 88 7 chr15 69451846 69452772 -34042202 + L1_Mus3 LINE L1 5632 6632 -6 6 1114 309 225 30 101 chr15 69452779 69452793 -34042181 + MT2B LTR ERVL 155 241 -355 6 1114 526 125 25 0 chr15 69452793 69452873 -34042101 + B1_Mus1 SINE Alu 3 84 -64 6 1114 360 0 0 0 chr15 69453575 69453615 -34041359 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1114 261 0 0 0 chr15 69453855 69453884 -34041090 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 6 1114 241 362 37 19 chr15 69455272 69455379 -34039595 + L2 LINE L2 2954 3062 -357 6 1114 3044 291 46 29 chr15 69455510 69456588 -34038386 - Lx9 LINE L1 -176 7468 6372 6 1114 987 125 6 17 chr15 69456628 69456807 -34038167 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 6 1114 403 358 8 0 chr15 69457158 69457278 -34037696 - B1F SINE Alu -19 130 10 6 1114 24 32 0 0 chr15 69457350 69457381 -34037593 + AT_rich Low_complexity Low_complexity 1 31 0 6 1114 285 75 0 0 chr15 69457759 69457799 -34037175 + (A)n Simple_repeat Simple_repeat 1 40 0 6 1114 299 333 30 30 chr15 69458284 69458384 -34036590 + PB1D10 SINE Alu 12 108 -9 6 1114 475 360 89 14 chr15 69458654 69458936 -34036038 - MLT1B LTR MaLR -36 354 52 6 1114 189 107 0 0 chr15 69458966 69458994 -34035980 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1114 1125 318 42 0 chr15 69459544 69459903 -34035071 - MTE2b LTR MaLR -4 375 2 6 1114 195 203 0 0 chr15 69460466 69460525 -34034449 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 6 1114 546 16 0 0 chr15 69460538 69460601 -34034373 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1114 222 287 103 47 chr15 69461635 69461782 -34033192 - MIRc SINE MIR -115 153 5 6 1114 1199 236 118 28 chr15 69464354 69464677 -34030297 + ORR1D1 LTR MaLR 21 372 -2 6 1114 3966 101 16 9 chr15 69464809 69465381 -34029593 - L1_Mus3 LINE L1 -5 6633 6058 6 1114 331 309 1 53 chr15 69465411 69465516 -34029458 - PB1D9 SINE Alu -48 101 1 6 1114 599 157 83 0 chr15 69465701 69465809 -34029165 + MTC LTR MaLR 9 125 -296 6 1114 515 149 23 0 chr15 69465878 69465965 -34029009 + MTC LTR MaLR 120 208 -213 6 1114 3752 81 2 4 chr15 69465966 69466485 -34028489 - L1_Mm LINE L1 -532 5351 4834 6 1114 2731 91 5 8 chr15 69466485 69466874 -34028100 + L1_Mus1 LINE L1 6178 6565 -2 6 1114 189 154 0 0 chr15 69466937 69466976 -34027998 + A-rich Low_complexity Low_complexity 1 39 0 6 1114 235 312 84 21 chr15 69467405 69467500 -34027474 - MER20 DNA MER1_type -30 189 89 6 1114 26 0 0 0 chr15 69467552 69467578 -34027396 + AT_rich Low_complexity Low_complexity 1 26 0 6 1114 351 53 0 50 chr15 69467584 69467644 -34027330 - Lx LINE L1 -6 6648 6592 6 1114 330 87 0 0 chr15 69467895 69467941 -34027033 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 1114 35 24 0 0 chr15 69467941 69467983 -34026991 + AT_rich Low_complexity Low_complexity 1 42 0 6 139 2318 112 3 3 chr15 69468153 69468492 -34026482 + L1_Mus2 LINE L1 6227 6565 -1 6 1115 757 361 65 12 chr15 69468574 69468913 -34026061 - MLT1H1 LTR MaLR -31 524 168 6 1115 364 258 218 41 chr15 69469037 69469207 -34025767 - ORR1E LTR MaLR -151 208 9 6 1115 396 323 154 8 chr15 69470461 69470695 -34024279 - MLT1B LTR MaLR -122 268 1 6 1115 799 284 99 6 chr15 69470979 69471301 -34023673 + Lx7 LINE L1 6692 7043 -653 6 1115 2167 138 82 12 chr15 69471938 69472340 -34022634 + RLTR23 LTR ERV1 1 430 0 6 1115 40384 16 2 6 chr15 69472491 69478690 -34016284 - L1Md_A LINE L1 0 6582 416 6 1115 468 51 0 0 chr15 69480293 69480352 -34014622 + (TA)n Simple_repeat Simple_repeat 1 59 0 6 1115 254 148 19 0 chr15 69480354 69480408 -34014566 + (TG)n Simple_repeat Simple_repeat 1 55 0 6 1115 186 345 102 17 chr15 69481795 69481964 -34013010 + MIRb SINE MIR 74 253 -15 6 1115 380 63 32 0 chr15 69481977 69482040 -34012934 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 6 1115 498 326 60 73 chr15 69482908 69483211 -34011763 + B4 SINE B4 9 292 0 6 1115 306 0 0 0 chr15 69483282 69483316 -34011658 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1115 207 0 0 0 chr15 69483785 69483808 -34011166 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 6 1115 261 379 29 73 chr15 69483840 69484085 -34010889 - Lx8 LINE L1 -89 7384 7151 6 1115 762 316 24 14 chr15 69484079 69484368 -34010606 + Lx9 LINE L1 6734 7025 -619 6 1115 21 36 0 0 chr15 69486083 69486111 -34008863 + AT_rich Low_complexity Low_complexity 1 28 0 6 1115 338 365 30 40 chr15 69486518 69486718 -34008256 + LTR84b LTR ERVL 65 262 -499 6 1115 584 308 25 75 chr15 69487331 69487531 -34007443 - MTE2a LTR MaLR -97 282 93 6 1115 785 142 0 39 chr15 69487535 69487689 -34007285 + L1Md_F2 LINE L1 6434 6581 -1 6 1115 249 318 28 18 chr15 69487742 69487851 -34007123 - MTE2a LTR MaLR -291 128 19 6 1115 807 336 34 42 chr15 69488712 69489097 -34005877 + Lx8 LINE L1 6596 6977 -496 6 1115 243 308 13 0 chr15 69489233 69489311 -34005663 + (TGG)n Simple_repeat Simple_repeat 1 79 0 6 1115 210 143 0 0 chr15 69489322 69489357 -34005617 + (ATG)n Simple_repeat Simple_repeat 1 35 0 6 1115 26 0 0 0 chr15 69489671 69489697 -34005277 + AT_rich Low_complexity Low_complexity 1 26 0 6 1115 350 42 0 20 chr15 69489707 69489756 -34005218 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 6 1115 1341 242 22 4 chr15 69489776 69490054 -34004920 - Lx5 LINE L1 -48 7002 6720 6 1115 180 111 0 0 chr15 69490445 69490472 -34004502 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1115 1136 62 7 0 chr15 69490473 69490618 -34004356 - B1_Mm SINE Alu 0 147 2 7 1115 8157 43 11 3 chr15 69490657 69492035 -34002939 - L1Md_F3 LINE L1 0 6584 5223 7 1115 235 269 74 122 chr15 69492098 69492246 -34002728 + L2c LINE L2 3241 3381 -6 7 1115 1195 85 0 11 chr15 69492461 69492640 -34002334 - L1Md_F2 LINE L1 -3 6579 6403 7 1115 1209 21 0 0 chr15 69493972 69494116 -34000858 + (TCTCC)n Simple_repeat Simple_repeat 4 147 0 7 1115 201 135 54 0 chr15 69494117 69494154 -34000820 + CT-rich Low_complexity Low_complexity 1 39 0 7 1115 459 327 60 0 chr15 69494154 69494304 -34000670 - RSINE1 SINE B4 -4 161 3 7 1115 193 75 24 24 chr15 69494352 69494393 -34000581 + (CAA)n Simple_repeat Simple_repeat 2 42 0 7 1115 336 370 75 54 chr15 69494599 69494933 -34000041 - ORR1E LTR MaLR -11 348 8 7 1115 494 301 51 20 chr15 69495021 69495218 -33999756 + B3 SINE B2 4 206 -10 7 1115 342 310 16 84 chr15 69495249 69495325 -33999649 - MTE-int LTR MaLR -131 1449 1385 7 1115 834 90 0 0 chr15 69495325 69495447 -33999527 - L1_Mus1 LINE L1 -1 6566 6445 7 1115 342 310 16 84 chr15 69495447 69495560 -33999414 - MTE-int LTR MaLR -196 1384 1273 7 1115 227 222 0 0 chr15 69495562 69495607 -33999367 + Lx7 LINE L1 6754 6798 -898 7 1115 22 35 0 0 chr15 69495607 69495636 -33999338 + AT_rich Low_complexity Low_complexity 1 29 0 7 1115 224 157 0 19 chr15 69495683 69495735 -33999239 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 7 1115 1906 357 108 35 chr15 69495740 69496901 -33998073 - MTE-int LTR MaLR -296 1284 39 7 1115 372 353 132 59 chr15 69496943 69497232 -33997742 - ORR1E LTR MaLR -6 353 44 7 1115 2525 213 30 28 chr15 69497397 69497933 -33997041 + RLTR20B3 LTR ERVK 21 557 -20 7 1115 612 160 58 51 chr15 69499356 69499494 -33995480 - URR1B DNA MER1_type -1 224 86 7 1115 308 247 166 27 chr15 69499494 69499536 -33995438 + CYRA11_Mm Unknown Y-chromosome 190 376 -241 7 1115 366 289 55 55 chr15 69499707 69499721 -33995253 + B1F1 SINE Alu 14 141 -8 7 1115 546 257 0 9 chr15 69499721 69499835 -33995139 + ID_B1 SINE B4 104 216 -8 7 1115 279 0 0 0 chr15 69499882 69499913 -33995061 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 1115 273 29 0 0 chr15 69500999 69501033 -33993941 + (CAAA)n Simple_repeat Simple_repeat 4 37 0 1 1115 255 317 12 0 chr15 69501574 69501656 -33993318 + ID4_ SINE ID 1 83 0 2 1115 23 33 0 0 chr15 69501941 69501971 -33993003 + AT_rich Low_complexity Low_complexity 1 30 0 3 1115 319 119 30 0 chr15 69502063 69502130 -33992844 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 4 1115 654 297 108 30 chr15 69502489 69503195 -33991779 + L1MB3 LINE L1 5360 6133 -41 5 1115 342 345 7 0 chr15 69505724 69505866 -33989108 + (TA)n Simple_repeat Simple_repeat 1 143 0 6 1115 24 0 0 0 chr15 69506030 69506054 -33988920 + AT_rich Low_complexity Low_complexity 1 24 0 7 1115 392 233 12 0 chr15 69506063 69506158 -33988816 - MTC LTR MaLR -323 96 1 8 1115 378 299 20 20 chr15 69506654 69506801 -33988173 + B1_Mur1 SINE Alu 3 149 0 9 1115 210 176 20 0 chr15 69506801 69506852 -33988122 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 1 1115 763 309 55 7 chr15 69507369 69507678 -33987296 + Lx8 LINE L1 6762 7085 -388 1 1115 204 239 0 21 chr15 69507898 69507945 -33987029 + GA-rich Low_complexity Low_complexity 3 48 0 1 1115 22 56 0 0 chr15 69508075 69508111 -33986863 + AT_rich Low_complexity Low_complexity 1 36 0 1 1115 937 82 89 0 chr15 69508446 69508581 -33986393 + B1_Mus2 SINE Alu 1 147 0 1 1115 240 35 0 0 chr15 69508581 69508610 -33986364 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1115 9465 204 56 37 chr15 69508706 69509927 -33985047 - Lx6 LINE L1 -1367 6093 4846 1 1115 486 0 0 0 chr15 69509927 69509981 -33984993 + (TC)n Simple_repeat Simple_repeat 2 55 0 1 1115 240 35 0 0 chr15 69509981 69510009 -33984965 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1115 9465 196 63 25 chr15 69510009 69510643 -33984331 - Lx6 LINE L1 -1035 4845 4206 1 1115 279 0 0 0 chr15 69510643 69510674 -33984300 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1115 243 0 0 0 chr15 69510674 69510700 -33984274 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 1115 9465 196 63 25 chr15 69510700 69511307 -33983667 - Lx6 LINE L1 -1675 4205 3561 1 1115 186 43 0 0 chr15 69511307 69511330 -33983644 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 1115 9465 196 63 25 chr15 69511330 69511453 -33983521 - Lx6 LINE L1 -2320 3560 3440 1 1115 2823 231 42 52 chr15 69511447 69511659 -33983315 + Lx6 LINE L1 6712 6904 -556 2 1115 990 80 0 0 chr15 69511659 69511796 -33983178 + (GGGAGA)n Simple_repeat Simple_repeat 3 139 0 2 1115 2823 231 42 52 chr15 69511796 69512339 -33982635 + Lx6 LINE L1 6905 7460 0 2 1115 631 68 0 10 chr15 69512696 69512800 -33982174 - L1Md_F2 LINE L1 0 6582 6480 2 1115 289 345 66 60 chr15 69512830 69512981 -33981993 + B4 SINE B4 2 153 -139 2 1115 1007 102 0 7 chr15 69514216 69514354 -33980620 + B1_Mus2 SINE Alu 1 137 -10 2 1115 265 24 0 45 chr15 69514354 69514398 -33980576 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 2 1115 380 221 0 38 chr15 69515047 69515127 -33979847 - B1_Mur1 SINE Alu -4 145 69 2 1115 389 241 0 0 chr15 69515567 69515646 -33979328 - Lx2 LINE L1 -123 6874 6796 2 1115 258 32 0 0 chr15 69516189 69516220 -33978754 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1115 1210 211 17 29 chr15 69516334 69516663 -33978311 + Lx7 LINE L1 5647 5950 -1746 3 1115 941 266 139 7 chr15 69516642 69516945 -33978029 + Lx7 LINE L1 6267 6609 -1087 3 1115 2646 203 42 14 chr15 69516977 69517527 -33977447 + Lx7 LINE L1 6799 7363 -333 3 1115 609 167 0 0 chr15 69517638 69517764 -33977210 + (TG)n Simple_repeat Simple_repeat 1 126 0 3 1115 545 285 41 22 chr15 69517764 69518033 -33976941 + Lx7 LINE L1 7423 7696 0 3 1115 970 111 0 0 chr15 69518805 69518940 -33976034 + B1_Mus2 SINE Alu 1 135 -12 3 1115 237 33 0 0 chr15 69518941 69518971 -33976003 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 3 1115 31 44 0 0 chr15 69519127 69519172 -33975802 + AT_rich Low_complexity Low_complexity 1 45 0 3 1115 211 153 92 23 chr15 69519210 69519297 -33975677 + (CATATA)n Simple_repeat Simple_repeat 2 94 0 3 1115 1547 319 67 33 chr15 69521120 69521761 -33973213 - MTE-int LTR MaLR -796 784 122 3 1115 4012 189 74 19 chr15 69521761 69522559 -33972415 + RMER21B LTR ERV1 1 842 0 3 1115 379 276 57 0 chr15 69522560 69522665 -33972309 - MTE-int LTR MaLR -1456 124 14 3 1115 7479 116 12 48 chr15 69522752 69524643 -33970331 - L1_Mus3 LINE L1 -1 6637 4847 3 1115 454 107 0 0 chr15 69524643 69524718 -33970256 + L1_Mm LINE L1 3242 3316 -2567 4 1115 716 143 0 16 chr15 69524714 69524835 -33970139 + L1_Mm LINE L1 4717 4835 -1048 4 1115 813 288 134 18 chr15 69524835 69525118 -33969856 - MTEb LTR MaLR -57 322 7 4 1115 201 258 0 0 chr15 69526001 69526067 -33968907 + GA-rich Low_complexity Low_complexity 4 69 0 4 1115 369 342 14 6 chr15 69526996 69527157 -33967817 - MIR SINE MIR -88 180 16 4 1115 263 304 51 0 chr15 69528111 69528190 -33966784 - B1F SINE Alu -66 83 1 4 1115 703 301 49 128 chr15 69529299 69529627 -33965347 - MTE2a LTR MaLR -71 308 7 4 1115 442 304 14 108 chr15 69530436 69530650 -33964324 + B3A SINE B2 5 198 0 4 1115 23 54 0 0 chr15 69530868 69530905 -33964069 + AT_rich Low_complexity Low_complexity 1 37 0 4 1115 623 215 99 8 chr15 69531002 69531133 -33963841 - B1_Mur2 SINE Alu -5 144 2 4 1115 242 257 13 13 chr15 69531149 69531167 -33963807 + Lx7 LINE L1 5748 5765 -115 4 1115 453 170 47 0 chr15 69531167 69531273 -33963701 - Lx6 LINE L1 -9 7451 7341 5 1115 277 164 0 18 chr15 69531273 69531329 -33963645 + Lx7 LINE L1 5769 5823 -1873 4 1115 249 197 0 0 chr15 69531659 69531725 -33963249 + (ATG)n Simple_repeat Simple_repeat 1 66 0 5 1115 14023 70 68 5 chr15 69532127 69534711 -33960263 - L1Md_F2 LINE L1 -152 6430 3658 5 1115 26 0 0 0 chr15 69535056 69535082 -33959892 + AT_rich Low_complexity Low_complexity 1 26 0 5 1115 405 0 0 0 chr15 69535349 69535394 -33959580 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 5 1115 1142 83 0 0 chr15 69535394 69535550 -33959424 - B2_Mm2 SINE B2 -38 157 2 5 1115 216 0 0 0 chr15 69535684 69535708 -33959266 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1115 257 140 0 17 chr15 69535995 69536053 -33958921 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 1115 675 318 46 79 chr15 69536203 69536572 -33958402 - ORR1E LTR MaLR -2 357 1 5 1115 1367 299 75 21 chr15 69536572 69536916 -33958058 - ORR1E-int LTR MaLR -53 1527 1185 5 1115 189 0 0 0 chr15 69536916 69536937 -33958037 + (TA)n Simple_repeat Simple_repeat 1 21 0 6 1115 1367 299 75 21 chr15 69536937 69537097 -33957877 - ORR1E-int LTR MaLR -396 1184 997 5 1115 471 116 12 0 chr15 69537179 69537265 -33957709 + Lx2A1 LINE L1 6918 7004 -4 6 1115 1816 260 106 30 chr15 69537268 69537976 -33956998 - RCHARR1 DNA MER1_type -147 827 45 6 1115 198 103 0 0 chr15 69538064 69538093 -33956881 + (TTTC)n Simple_repeat Simple_repeat 1 29 0 6 1115 5350 39 1 3 chr15 69538111 69538758 -33956216 - L1Md_F3 LINE L1 -14 6570 5925 6 1115 350 40 0 0 chr15 69538760 69538810 -33956164 + MusHAL1 LINE L1 1672 1721 -991 6 1115 351 0 0 0 chr15 69538862 69538901 -33956073 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 6 1115 3161 192 42 17 chr15 69538901 69539564 -33955410 - Lx3C LINE L1 -18 6958 6279 6 1115 1467 316 55 42 chr15 69539568 69540228 -33954746 - ORR1E-int LTR MaLR -912 668 1 5 1115 506 348 44 19 chr15 69540228 69540436 -33954538 - ORR1E LTR MaLR 0 379 181 5 1115 486 0 0 0 chr15 69540436 69540490 -33954484 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 1115 506 375 69 34 chr15 69540490 69540663 -33954311 - ORR1E LTR MaLR -179 180 4 5 1115 1966 122 31 25 chr15 69542888 69543215 -33951759 + ORR1A4 LTR MaLR 1 329 0 6 1115 558 79 0 0 chr15 69544082 69544158 -33950816 + (CA)n Simple_repeat Simple_repeat 1 76 0 7 1115 308 317 42 35 chr15 69544850 69544994 -33949980 + L1MD3 LINE L1 5916 6060 -1935 7 1115 234 0 0 0 chr15 69545506 69545532 -33949442 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 1115 1099 182 57 22 chr15 69546724 69546954 -33948020 + MYSERV16_I-int LTR ERVK 506 743 -1583 7 1115 2754 93 10 5 chr15 69546954 69547352 -33947622 - MTB LTR MaLR 0 400 1 7 1115 234 91 0 0 chr15 69547456 69547489 -33947485 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1115 700 159 15 22 chr15 69547532 69547667 -33947307 + MYSERV16_I-int LTR ERVK 820 953 -1373 7 1115 3518 171 98 76 chr15 69547669 69548093 -33946881 + RMER17B LTR ERVK 1 399 -507 7 1115 516 45 0 0 chr15 69548093 69548160 -33946814 + (TC)n Simple_repeat Simple_repeat 2 68 0 7 1115 3518 171 101 30 chr15 69548160 69548701 -33946273 + RMER17B LTR ERVK 369 958 0 7 1115 4873 86 8 35 chr15 69548818 69549542 -33945432 + Lx3_Mus LINE L1 5991 6695 -314 7 1115 10312 24 0 0 chr15 69549546 69551427 -33943547 - L1Md_T LINE L1 0 6582 4703 7 1115 2157 107 35 0 chr15 69551427 69551746 -33943228 + Lx3_Mus LINE L1 6680 7009 0 7 1115 6272 164 16 9 chr15 69551761 69552961 -33942013 + MYSERV16_I-int LTR ERVK 1051 2258 -68 7 1115 2032 204 129 15 chr15 69552997 69553419 -33941555 + RLTR20B3 LTR ERVK 1 483 -94 8 1115 423 0 0 0 chr15 69553419 69553466 -33941508 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1115 2032 204 129 15 chr15 69553466 69553561 -33941413 + RLTR20B3 LTR ERVK 484 576 -1 8 1115 28 61 0 0 chr15 69553849 69553898 -33941076 + AT_rich Low_complexity Low_complexity 1 49 0 8 1115 509 246 0 18 chr15 69555167 69555279 -33939695 - MER5A1 DNA MER1_type -26 140 31 8 1115 204 125 0 0 chr15 69555918 69555950 -33939024 + (TC)n Simple_repeat Simple_repeat 2 33 0 8 1115 465 19 0 0 chr15 69555982 69556036 -33938938 + (TC)n Simple_repeat Simple_repeat 1 54 0 8 1115 486 0 0 0 chr15 69556037 69556091 -33938883 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 1115 279 79 0 0 chr15 69556758 69556796 -33938178 + (TC)n Simple_repeat Simple_repeat 1 38 0 8 1115 369 0 0 0 chr15 69557338 69557379 -33937595 + (TC)n Simple_repeat Simple_repeat 2 42 0 8 1115 597 254 229 20 chr15 69557835 69558277 -33936697 - L1MA4 LINE L1 -176 6124 5591 8 1115 490 343 60 8 chr15 69558447 69558682 -33936292 + Lx8 LINE L1 6962 7208 -265 8 1115 414 346 42 63 chr15 69559395 69559728 -33935246 + MLT1A0 LTR MaLR 11 336 -29 9 1115 310 148 62 0 chr15 69559829 69559910 -33935064 - RMER4B LTR ERVK -2 583 498 9 1115 450 0 0 0 chr15 69559910 69559960 -33935014 + (GA)n Simple_repeat Simple_repeat 1 50 0 9 1115 1391 233 142 24 chr15 69559960 69560369 -33934605 - RMER4B LTR ERVK -128 457 1 9 1115 285 246 109 3 chr15 69560719 69560847 -33934127 - L1MA7 LINE L1 -90 6210 6073 9 1115 225 0 0 0 chr15 69560849 69560874 -33934100 + (TA)n Simple_repeat Simple_repeat 1 25 0 9 1115 2185 318 43 93 chr15 69560919 69562117 -33932857 + Lx5 LINE L1 5894 7031 -19 9 1115 200 164 0 68 chr15 69562146 69562205 -33932769 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 9 1115 2778 70 3 0 chr15 69562484 69562839 -33932135 + L1_Mus1 LINE L1 6200 6555 -12 9 1115 405 0 0 0 chr15 69562842 69562887 -33932087 + (GA)n Simple_repeat Simple_repeat 2 46 0 9 1115 282 343 91 57 chr15 69562887 69563063 -33931911 + B4 SINE B4 29 210 -82 9 1115 4830 38 2 0 chr15 69564127 69564701 -33930273 + L1Md_F2 LINE L1 6003 6577 -5 1 1115 184 304 0 21 chr15 69565057 69565104 -33929870 - L2c LINE L2 -232 3155 3110 1 1115 307 188 35 59 chr15 69565329 69565414 -33929560 + HAL1-3A_ME LINE L1 1975 2057 -801 1 1115 414 0 0 0 chr15 69566466 69566512 -33928462 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1115 206 217 0 0 chr15 69566556 69566602 -33928372 - L2b LINE L2 0 3375 3330 1 1115 395 355 50 41 chr15 69567897 69568117 -33926857 + LTR16C LTR ERVL 247 468 -21 1 1115 202 364 45 0 chr15 69568142 69568230 -33926744 - L2a LINE L2 -3 3423 3332 1 1115 190 195 82 24 chr15 69568485 69568534 -33926440 - MIRm SINE MIR -114 162 105 1 1115 216 0 0 0 chr15 69568699 69568723 -33926251 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1115 31028 99 9 17 chr15 69569392 69573755 -33921219 + L1Md_F2 LINE L1 416 4717 -1166 1 1115 5916 45 15 8 chr15 69573755 69574503 -33920471 + L1Md_F2 LINE L1 5829 6581 -1 1 1115 31028 81 8 10 chr15 69574503 69575348 -33919626 + L1Md_F2 LINE L1 4718 5585 -298 1 1115 7522 71 10 3 chr15 69575349 69576334 -33918640 + L1Md_F2 LINE L1 5588 6579 -3 1 1115 864 210 33 0 chr15 69576812 69576993 -33917981 + Lx4B LINE L1 6351 6537 -521 1 1115 450 0 0 0 chr15 69578888 69578938 -33916036 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1115 221 299 31 38 chr15 69578986 69579112 -33915862 - L2a LINE L2 -90 3336 3192 1 1115 236 314 0 0 chr15 69580014 69580065 -33914909 + MER81 DNA AcHobo 44 94 -20 1 1115 426 178 22 44 chr15 69581029 69581211 -33913763 + (TA)n Simple_repeat Simple_repeat 2 179 0 1 1115 7649 47 14 0 chr15 69581345 69582281 -33912693 - L1Md_F2 LINE L1 -13 6569 5621 1 1115 1407 78 100 5 chr15 69582563 69582783 -33912191 - L1_Mus2 LINE L1 -1 6565 6325 1 1115 820 283 22 84 chr15 69582871 69583282 -33911692 + L1VL1 LINE L1 10 418 -6000 1 1115 264 256 22 22 chr15 69583441 69583533 -33911441 + L1_Mus2 LINE L1 675 766 -5850 1 1115 26762 133 42 20 chr15 69583533 69587639 -33907335 + L1_Mus2 LINE L1 671 4928 -955 1 1115 1124 76 0 0 chr15 69587639 69587784 -33907190 + B1_Mus1 SINE Alu 1 145 -3 1 1115 261 57 0 0 chr15 69587784 69587819 -33907155 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1 1115 26762 103 64 12 chr15 69587819 69589436 -33905538 + L1_Mus2 LINE L1 4929 6564 -2 1 1115 327 328 60 94 chr15 69590966 69591314 -33903660 - ORR1E LTR MaLR -6 364 16 1 1115 540 301 0 71 chr15 69591678 69591889 -33903085 + B3A SINE B2 3 198 0 1 1115 416 388 87 33 chr15 69592510 69592878 -33902096 + MLT2B1 LTR ERVL 3 390 -130 1 1115 7349 93 34 14 chr15 69592896 69594052 -33900922 + MusHAL1 LINE L1 1534 2712 0 1 1115 328 266 58 12 chr15 69594108 69594279 -33900695 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 1 1115 254 275 43 11 chr15 69594326 69594418 -33900556 + ERVL-B4-int LTR ERVL 2 96 -5618 1 1115 1466 262 78 3 chr15 69594434 69594816 -33900158 + MTD LTR MaLR 1 411 -8 1 1115 486 387 59 31 chr15 69595004 69595293 -33899681 + MLT-int LTR MaLR 215 516 -1219 1 1115 6143 73 4 5 chr15 69595293 69596109 -33898865 + L1Md_F2 LINE L1 5756 6570 -12 1 1115 486 387 59 31 chr15 69596109 69596206 -33898768 + MLT-int LTR MaLR 517 611 -1124 1 1115 597 295 74 17 chr15 69596523 69596754 -33898220 + MLT1A0 LTR MaLR 120 363 -2 1 1115 959 301 45 95 chr15 69596837 69597259 -33897715 - Lx6 LINE L1 -28 7432 7032 1 1115 2676 182 28 0 chr15 69597270 69597731 -33897243 + L1_Mur2 LINE L1 5400 5873 -4 1 1115 1585 209 176 79 chr15 69597722 69598227 -33896747 + Lx4B LINE L1 6499 7052 -6 1 1115 213 346 22 25 chr15 69598299 69598435 -33896539 + L2a LINE L2 2987 3124 -302 1 1115 303 28 0 0 chr15 69598722 69598758 -33896216 + (TAA)n Simple_repeat Simple_repeat 3 38 0 1 139 646 379 58 35 chr15 69599230 69599572 -33895402 - MTEa LTR MaLR -8 371 22 1 1116 33 66 0 0 chr15 69599717 69599778 -33895196 + AT_rich Low_complexity Low_complexity 1 61 0 1 1116 2917 53 5 5 chr15 69599779 69600157 -33894817 - L1Md_F3 LINE L1 -1 6583 6206 1 1116 542 204 7 70 chr15 69600159 69600301 -33894673 + URR1B DNA MER1_type 93 225 0 1 1116 212 0 36 0 chr15 69600953 69600981 -33893993 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1116 690 271 6 12 chr15 69601503 69601664 -33893310 + B3A SINE B2 1 160 -38 1 1116 1816 317 110 7 chr15 69602170 69602996 -33891978 - Lx8 LINE L1 -327 7146 6236 1 1116 231 353 0 0 chr15 69603322 69603390 -33891584 + ID4_ SINE ID 2 69 -14 1 1116 829 208 323 41 chr15 69604944 69605237 -33889737 - MTC LTR MaLR 0 421 42 1 1116 1045 183 41 32 chr15 69605237 69605457 -33889517 - URR1A DNA MER1_type 0 226 5 1 1116 544 216 88 82 chr15 69605457 69605501 -33889473 - MTC LTR MaLR -380 41 1 1 1116 348 301 87 0 chr15 69605501 69605599 -33889375 + PB1D10 SINE Alu 10 116 -1 1 1116 267 307 184 17 chr15 69606523 69606702 -33888272 + MIRc SINE MIR 20 228 -40 1 1116 366 353 59 12 chr15 69606778 69606947 -33888027 - MER74A LTR ERVL 0 558 382 1 1116 531 340 113 20 chr15 69607321 69607675 -33887299 + Lx8 LINE L1 7045 7431 -42 1 1116 915 192 113 10 chr15 69607868 69608063 -33886911 - URR1B DNA MER1_type -3 222 8 1 1116 3075 154 57 35 chr15 69608706 69609306 -33885668 + Lx2A1 LINE L1 5780 6392 -616 1 1116 1364 115 90 4 chr15 69609308 69609553 -33885421 + Lx2A1 LINE L1 6741 7006 -2 1 1116 2103 259 44 6 chr15 69610566 69611068 -33883906 - Lx6 LINE L1 -8 7452 6932 1 1116 2190 281 42 20 chr15 69611064 69611728 -33883246 + Lx6 LINE L1 5800 6478 -982 1 1116 1034 51 7 0 chr15 69611898 69612035 -33882939 + (TCTA)n Simple_repeat Simple_repeat 1 138 0 1 1116 406 56 0 0 chr15 69612043 69612097 -33882877 - B2_Mm2 SINE B2 -73 122 69 1 1116 232 363 72 6 chr15 69613347 69613527 -33881447 - Charlie19a DNA Charlie -193 193 2 1 1116 1399 81 16 0 chr15 69613826 69614012 -33880962 + B2_Mm2 SINE B2 1 189 -6 1 1116 271 91 0 0 chr15 69614544 69614588 -33880386 - MTC LTR MaLR -180 239 196 1 1116 228 100 0 0 chr15 69614588 69614628 -33880346 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 1 1116 2158 60 32 0 chr15 69614630 69614911 -33880063 - L1Md_F2 LINE L1 -3 6579 6290 1 1116 687 203 98 0 chr15 69614911 69615064 -33879910 - MTC LTR MaLR -222 199 32 1 1116 25 51 0 0 chr15 69615220 69615259 -33879715 + AT_rich Low_complexity Low_complexity 1 39 0 1 1116 7568 160 35 15 chr15 69615827 69617189 -33877785 + Lx2 LINE L1 5609 6997 0 1 1116 930 180 0 0 chr15 69617566 69617744 -33877230 + T-rich Low_complexity Low_complexity 3 180 0 1 1116 293 304 81 52 chr15 69617746 69617854 -33877120 - B1_Mur2 SINE Alu 0 120 5 1 1116 207 0 0 0 chr15 69618787 69618810 -33876164 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1116 688 233 93 26 chr15 69619055 69619249 -33875725 - Lx6 LINE L1 -31 7429 7223 1 1116 528 291 50 110 chr15 69619402 69619826 -33875148 + RMER20B LTR ERVK 220 595 -32 1 1116 248 180 20 0 chr15 69619901 69619951 -33875023 - Lx6 LINE L1 -231 7229 7179 1 1116 2048 141 16 0 chr15 69620573 69620892 -33874082 - ORR1A3 LTR MaLR -2 324 1 1 1116 410 0 20 0 chr15 69621121 69621171 -33873803 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 1116 24 32 0 0 chr15 69621265 69621296 -33873678 + AT_rich Low_complexity Low_complexity 1 31 0 1 1116 2321 84 0 0 chr15 69622201 69622510 -33872464 - L1_Mus1 LINE L1 -1 6566 6258 1 1116 342 152 0 0 chr15 69622618 69622677 -33872297 + T-rich Low_complexity Low_complexity 1 59 0 1 1116 3705 118 16 12 chr15 69622868 69623444 -33871530 - Lx LINE L1 0 6654 6077 1 1116 296 380 30 34 chr15 69623713 69623950 -33871024 - MIRb SINE MIR -29 239 4 1 1116 22 56 0 0 chr15 69624110 69624146 -33870828 + AT_rich Low_complexity Low_complexity 1 36 0 1 1116 225 0 0 0 chr15 69624751 69624776 -33870198 + (GCTG)n Simple_repeat Simple_repeat 4 28 0 1 1116 870 301 66 18 chr15 69625667 69626063 -33868911 - MTD LTR MaLR 0 419 5 1 1116 764 259 253 10 chr15 69626317 69626621 -33868353 + ORR1C1 LTR MaLR 1 378 0 1 1116 1076 250 25 11 chr15 69626623 69626902 -33868072 + ORR1C1-int LTR MaLR 3 285 -1224 1 1116 1536 219 64 110 chr15 69626912 69627395 -33867579 - RMER4A LTR ERVK 0 466 6 1 1116 1602 216 31 59 chr15 69627413 69627767 -33867207 + ORR1C1 LTR MaLR 35 378 0 1 1116 306 87 42 42 chr15 69628675 69628771 -33866203 + T-rich Low_complexity Low_complexity 4 99 0 1 1116 378 0 0 0 chr15 69629496 69629538 -33865436 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1116 432 0 0 0 chr15 69629742 69629790 -33865184 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1116 306 0 0 0 chr15 69629790 69629823 -33865151 + (GA)n Simple_repeat Simple_repeat 1 34 0 1 1116 345 317 19 0 chr15 69630695 69630799 -33864175 - MTEa LTR MaLR -271 108 3 1 1116 1107 58 0 0 chr15 69630977 69631116 -33863858 + B1_Mm SINE Alu 2 140 -7 1 1116 341 149 0 15 chr15 69631196 69631264 -33863710 + (TA)n Simple_repeat Simple_repeat 1 67 0 1 1116 265 267 111 48 chr15 69631496 69631622 -33863352 - B1F SINE Alu 0 149 16 1 1116 190 194 45 75 chr15 69631677 69631744 -33863230 + L3 LINE CR1 2432 2496 -1993 1 1116 2212 82 3 3 chr15 69631863 69632171 -33862803 + L1_Mus4 LINE L1 6324 6631 -5 1 1116 298 81 16 31 chr15 69632205 69632269 -33862705 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 1 1116 1147 81 11 11 chr15 69633819 69633994 -33860980 + L1_Mus3 LINE L1 6458 6632 -6 1 1116 23 0 0 0 chr15 69634003 69634026 -33860948 + AT_rich Low_complexity Low_complexity 1 23 0 1 1116 422 381 8 0 chr15 69634139 69634273 -33860701 + RSINE1 SINE B4 3 137 -28 1 1116 300 53 0 0 chr15 69634275 69634313 -33860661 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1116 195 100 0 0 chr15 69635497 69635527 -33859447 + (CATA)n Simple_repeat Simple_repeat 3 32 0 1 1116 1328 191 0 0 chr15 69635903 69636128 -33858846 + URR1A DNA MER1_type 1 225 -1 1 1116 307 268 104 48 chr15 69636345 69636631 -33858343 - L1MC2 LINE L1 -449 5895 5603 1 1116 424 339 65 30 chr15 69638556 69638787 -33856187 - RMER15 LTR ERVL 0 575 337 1 1116 1807 181 17 14 chr15 69638983 69639337 -33855637 - RLTR15 LTR ERVK -4 355 1 2 1116 23 0 0 0 chr15 69639984 69640007 -33854967 + AT_rich Low_complexity Low_complexity 1 23 0 2 1116 690 327 51 59 chr15 69640321 69640893 -33854081 - L1_Mur3 LINE L1 -1080 4800 4234 2 1116 637 293 21 14 chr15 69640942 69641229 -33853745 - L1_Mur3 LINE L1 -2305 3575 3287 2 1116 5497 230 87 24 chr15 69641747 69644220 -33850754 + Lx7 LINE L1 4303 6936 -760 2 1116 936 182 10 79 chr15 69644236 69644439 -33850535 - URR1B DNA MER1_type -36 189 1 2 1116 223 304 29 0 chr15 69644439 69644507 -33850467 - B3A SINE B2 -125 73 4 2 1116 532 167 9 9 chr15 69644728 69644837 -33850137 + L1_Mur2 LINE L1 2063 2171 -3706 2 1116 410 336 111 45 chr15 69645075 69645400 -33849574 + L1M5 LINE L1 4092 4431 -1715 2 1116 240 35 0 0 chr15 69645400 69645429 -33849545 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 2 1116 443 185 0 11 chr15 69645430 69645523 -33849451 - Lx3A LINE L1 -14 6967 6876 2 1116 410 336 111 45 chr15 69645523 69645755 -33849219 + L1M5 LINE L1 4432 4688 -1458 2 1116 33 90 0 0 chr15 69646012 69646101 -33848873 + AT_rich Low_complexity Low_complexity 1 89 0 2 1116 475 65 0 13 chr15 69646299 69646377 -33848597 - Lx3_Mus LINE L1 0 7009 6933 2 1116 243 139 0 0 chr15 69646377 69646413 -33848561 + Lx3_Mus LINE L1 6784 6819 -190 2 1116 21 0 0 0 chr15 69647379 69647400 -33847574 + AT_rich Low_complexity Low_complexity 1 21 0 2 1116 1242 54 0 0 chr15 69647414 69647563 -33847411 - L1Md_F3 LINE L1 -265 6319 6171 2 1116 1260 41 59 0 chr15 69647563 69647732 -33847242 + L1Md_F3 LINE L1 6392 6570 -14 2 1116 1693 244 88 75 chr15 69648237 69648470 -33846504 - RLTR40 LTR ERVK -38 779 542 2 1116 270 0 0 0 chr15 69648470 69648500 -33846474 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1116 1693 244 88 75 chr15 69648500 69649028 -33845946 - RLTR40 LTR ERVK -276 541 8 2 1116 1148 168 77 0 chr15 69649156 69649365 -33845609 - URR1B DNA MER1_type 0 225 1 2 1116 383 68 17 0 chr15 69649978 69650037 -33844937 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 1116 225 178 0 0 chr15 69650064 69650109 -33844865 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 1116 632 271 71 12 chr15 69650629 69650797 -33844177 - B3 SINE B2 0 216 39 2 1116 3724 132 102 8 chr15 69651598 69652238 -33842736 - L1_Mus4 LINE L1 -3 6633 5934 2 1116 1555 179 0 0 chr15 69652240 69652508 -33842466 + L1_Mur2 LINE L1 4923 5190 -687 2 1116 22 35 0 0 chr15 69652612 69652641 -33842333 + AT_rich Low_complexity Low_complexity 1 29 0 2 1116 23 0 0 0 chr15 69653035 69653058 -33841916 + AT_rich Low_complexity Low_complexity 1 23 0 2 1116 395 336 40 0 chr15 69653073 69653198 -33841776 - B1F SINE Alu 0 149 20 2 1116 553 165 371 18 chr15 69653467 69653634 -33841340 + URR1A DNA MER1_type 1 226 0 2 1116 21 71 0 0 chr15 69654336 69654378 -33840596 + AT_rich Low_complexity Low_complexity 1 42 0 2 1116 911 321 81 6 chr15 69654379 69654727 -33840247 + MTEa LTR MaLR 6 379 0 2 1116 678 347 68 14 chr15 69654807 69655172 -33839802 + MTE-int LTR MaLR 158 542 -1038 2 1116 26 0 0 0 chr15 69655203 69655229 -33839745 + AT_rich Low_complexity Low_complexity 1 26 0 2 1116 622 35 0 23 chr15 69656083 69656170 -33838804 + (GAAA)n Simple_repeat Simple_repeat 2 86 0 2 1116 1812 340 70 29 chr15 69656179 69656909 -33838065 + MTE-int LTR MaLR 596 1355 -225 2 1116 246 230 73 73 chr15 69656925 69657061 -33837913 - Lx8 LINE L1 -6 7467 7332 2 1116 781 300 69 31 chr15 69657063 69657352 -33837622 + MTE-int LTR MaLR 1273 1572 -8 2 1116 431 279 118 28 chr15 69657495 69657639 -33837335 + MTEa LTR MaLR 146 302 -77 2 1116 666 259 97 109 chr15 69658085 69658230 -33836744 - L1_Mur3 LINE L1 -228 5619 5505 2 1116 2307 160 9 16 chr15 69658230 69658655 -33836319 + BGLII_Mus LTR ERVK 1 422 0 2 1116 666 259 97 109 chr15 69658655 69658682 -33836292 - L1_Mur3 LINE L1 -343 5504 5497 2 1116 3285 175 60 30 chr15 69658682 69659354 -33835620 - RLTR17 LTR ERVK 0 692 1 2 1116 824 272 98 83 chr15 69659354 69659802 -33835172 - L1_Mur3 LINE L1 -369 5511 5025 2 1116 1751 221 60 13 chr15 69659802 69660200 -33834774 - MTC LTR MaLR 0 421 5 2 1116 824 303 102 24 chr15 69660200 69660300 -33834674 - L1_Mur3 LINE L1 -856 5024 4929 2 1116 436 256 49 8 chr15 69660351 69660473 -33834501 + RLTR17 LTR ERVK 201 327 -365 2 1116 310 286 83 0 chr15 69660538 69660622 -33834352 + PB1D7 SINE Alu 23 113 -7 2 1116 312 288 14 7 chr15 69660713 69660860 -33834114 + (TA)n Simple_repeat Simple_repeat 1 148 0 2 1116 2043 324 37 66 chr15 69660860 69661916 -33833058 + Lx8 LINE L1 6210 7234 -239 2 1116 410 114 14 0 chr15 69662094 69662164 -33832810 + (CCTA)n Simple_repeat Simple_repeat 1 71 0 2 1116 351 0 0 0 chr15 69662171 69662210 -33832764 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 2 1116 2251 118 0 3 chr15 69662213 69662536 -33832438 + ORR1A2 LTR MaLR 5 326 -1 2 1116 243 88 0 0 chr15 69662536 69662570 -33832404 + (TCTA)n Simple_repeat Simple_repeat 3 36 0 2 1116 4149 57 0 2 chr15 69664035 69664559 -33830415 - L1Md_F2 LINE L1 0 6582 6060 2 1116 303 28 0 0 chr15 69664608 69664644 -33830330 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 1116 28 0 0 0 chr15 69665391 69665419 -33829555 + AT_rich Low_complexity Low_complexity 1 28 0 2 1116 222 118 0 0 chr15 69665756 69665790 -33829184 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1116 186 272 58 69 chr15 69665897 69665984 -33828990 - MIR3 SINE MIR -39 169 84 2 1116 677 210 12 0 chr15 69666595 69666757 -33828217 + CT-rich Low_complexity Low_complexity 2 165 0 2 1116 2380 0 0 0 chr15 69667045 69667308 -33827666 - L1Md_T LINE L1 0 6582 6320 2 1116 3294 209 109 35 chr15 69668111 69668985 -33825989 - RMER17B LTR ERVK -16 942 5 2 1116 320 325 69 13 chr15 69669205 69669364 -33825610 + RMER15 LTR ERVL 299 466 -109 2 1116 1667 166 7 33 chr15 69670043 69670349 -33824625 + ORR1A3 LTR MaLR 29 326 0 2 1116 720 306 69 44 chr15 69670349 69670462 -33824512 + RMER15-int LTR ERVL 817 925 -4074 2 1116 451 318 16 43 chr15 69670462 69670649 -33824325 - B3A SINE B2 -16 182 1 2 1116 720 306 69 44 chr15 69670649 69670925 -33824049 + RMER15-int LTR ERVL 926 1216 -3783 2 1116 352 252 108 0 chr15 69670953 69671064 -33823910 + RMER15-int LTR ERVL 1284 1406 -3593 2 1116 383 324 82 46 chr15 69671195 69671555 -33823419 - MTC LTR MaLR -9 410 13 2 1116 562 309 169 8 chr15 69671993 69672276 -33822698 - ORR1E LTR MaLR -33 346 2 2 1116 266 300 111 12 chr15 69673263 69673344 -33821630 - RSINE1 SINE B4 -3 162 74 2 1116 450 157 0 0 chr15 69673344 69673427 -33821547 + (TG)n Simple_repeat Simple_repeat 2 84 0 2 1116 333 47 0 0 chr15 69673515 69673558 -33821416 + (CATA)n Simple_repeat Simple_repeat 4 46 0 2 1116 342 320 88 11 chr15 69673876 69674249 -33820725 + L1MC3 LINE L1 5707 6108 -1677 2 1116 23 0 0 0 chr15 69674438 69674461 -33820513 + AT_rich Low_complexity Low_complexity 1 23 0 2 1116 261 0 0 0 chr15 69674867 69674896 -33820078 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1116 592 282 14 21 chr15 69674924 69675069 -33819905 - B3A SINE B2 -54 144 1 2 1116 207 114 0 0 chr15 69675717 69675752 -33819222 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1116 1395 275 44 85 chr15 69675830 69676374 -33818600 - RMER5 LTR ERV1 -12 522 1 2 1116 3046 50 13 3 chr15 69676762 69677146 -33817828 - RLTR10 LTR ERVK -2 388 1 2 1116 360 0 0 0 chr15 69678303 69678343 -33816631 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 1116 21 36 0 0 chr15 69678429 69678457 -33816517 + AT_rich Low_complexity Low_complexity 1 28 0 2 1116 200 245 0 20 chr15 69679408 69679458 -33815516 - L2a LINE L2 -78 3348 3300 2 1116 237 132 0 0 chr15 69679577 69679615 -33815359 + (CCCCCT)n Simple_repeat Simple_repeat 3 40 0 2 1116 444 51 0 0 chr15 69679673 69679732 -33815242 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1116 480 187 0 0 chr15 69679985 69680108 -33814866 + (TG)n Simple_repeat Simple_repeat 2 124 0 2 1116 32 26 0 0 chr15 69680606 69680645 -33814329 + AT_rich Low_complexity Low_complexity 1 39 0 2 1116 266 264 0 27 chr15 69680694 69680768 -33814206 - MLT1A1 LTR MaLR -23 385 314 2 1116 301 239 15 0 chr15 69681288 69681355 -33813619 + RMER30 DNA MER1_type 133 200 -2 2 1116 294 53 0 50 chr15 69681743 69681803 -33813171 + (CAAA)n Simple_repeat Simple_repeat 2 58 0 2 1116 2744 151 31 2 chr15 69681803 69682254 -33812720 + Lx2 LINE L1 6530 6993 -4 2 1116 395 296 49 0 chr15 69682269 69682411 -33812563 + Lx8 LINE L1 7136 7284 -189 2 1116 586 307 119 21 chr15 69682909 69683438 -33811536 - L1_Mur3 LINE L1 -208 5672 5092 2 1116 408 276 154 49 chr15 69684378 69684638 -33810336 - Lx9 LINE L1 -17 7627 7329 2 1116 1293 86 43 0 chr15 69684638 69684825 -33810149 - B2_Mm2 SINE B2 0 195 1 2 1116 408 276 154 49 chr15 69684825 69684914 -33810060 - Lx9 LINE L1 -316 7328 7241 2 1116 1428 268 77 23 chr15 69684950 69685340 -33809634 - MTD LTR MaLR -8 411 1 2 1116 1077 225 47 42 chr15 69685475 69685855 -33809119 + Lx9 LINE L1 7262 7643 -1 2 1116 392 333 84 7 chr15 69686062 69686216 -33808758 + MLT1K LTR MaLR 8 173 -422 2 1116 258 357 72 48 chr15 69686286 69686536 -33808438 + MLT1K LTR MaLR 295 550 -45 2 1116 513 361 73 75 chr15 69688051 69688476 -33806498 - MLT2B3 LTR ERVL -121 433 10 2 1116 379 315 70 8 chr15 69689113 69689241 -33805733 - B1F SINE Alu -1 148 13 2 1116 478 346 16 21 chr15 69689266 69689452 -33805522 - RMER15 LTR ERVL -17 558 374 2 1116 263 340 129 0 chr15 69690835 69691029 -33803945 - ID_B1 SINE B4 -5 219 1 2 1116 1739 239 13 16 chr15 69691072 69691447 -33803527 + MTC LTR MaLR 3 376 -45 2 1116 418 300 81 91 chr15 69691585 69691882 -33803092 + LTR73 LTR ERV1 15 308 -264 2 1116 343 421 12 25 chr15 69692185 69692348 -33802626 - RSINE1 SINE B4 -2 163 3 2 1116 1591 142 64 78 chr15 69693142 69693487 -33801487 - RLTR11B LTR ERVK 0 453 114 2 1116 2755 108 12 12 chr15 69693487 69693891 -33801083 - MTB_Mm LTR MaLR -3 404 1 2 1116 3785 156 122 21 chr15 69693891 69694668 -33800306 - MTB_Mm-int LTR MaLR 0 1258 403 2 1116 2654 115 0 20 chr15 69694695 69695095 -33799879 - MTB_Mm LTR MaLR 0 407 16 2 1116 342 0 0 0 chr15 69695095 69695133 -33799841 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1116 450 0 0 0 chr15 69695133 69695183 -33799791 + (CCA)n Simple_repeat Simple_repeat 1 50 0 2 1116 513 155 68 0 chr15 69695197 69695300 -33799674 - RLTR11B LTR ERVK -320 133 24 2 1116 510 17 0 0 chr15 69696927 69696986 -33797988 + (CA)n Simple_repeat Simple_repeat 1 59 0 2 1116 2965 118 48 8 chr15 69697193 69697670 -33797304 + Lx3A LINE L1 6486 6981 0 3 1116 375 324 6 6 chr15 69697841 69698012 -33796962 + CT-rich Low_complexity Low_complexity 1 171 0 3 1116 735 116 0 0 chr15 69698020 69698132 -33796842 + (TTTC)n Simple_repeat Simple_repeat 3 114 0 3 1116 189 0 0 0 chr15 69698876 69698897 -33796077 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 1116 284 266 118 24 chr15 69699010 69699137 -33795837 + MER97c DNA MER1_type? 41 179 -911 3 1116 341 107 0 39 chr15 69699398 69699476 -33795498 + (A)n Simple_repeat Simple_repeat 1 75 0 3 1116 2480 181 21 103 chr15 69699987 69700746 -33794228 + L1_Mur2 LINE L1 2914 3610 -2267 3 1116 1588 156 41 63 chr15 69701224 69701539 -33793435 - ORR1A4 LTR MaLR -21 308 1 3 1116 189 427 45 14 chr15 69701834 69702057 -33792917 - MIR SINE MIR -13 249 20 3 1116 198 167 0 0 chr15 69702211 69702247 -33792727 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1116 54 77 0 0 chr15 69702248 69702365 -33792609 + AT_rich Low_complexity Low_complexity 1 117 0 3 1116 4712 112 27 25 chr15 69702386 69702712 -33792262 + RMER17D2 LTR ERVK 1 318 -491 3 1116 897 10 0 0 chr15 69702712 69702814 -33792160 + (TCTCC)n Simple_repeat Simple_repeat 3 104 0 3 1116 4712 112 27 25 chr15 69702814 69703294 -33791680 + RMER17D2 LTR ERVK 319 809 0 3 1116 225 197 0 0 chr15 69703711 69703782 -33791192 + (TA)n Simple_repeat Simple_repeat 2 72 0 3 1116 1119 219 108 119 chr15 69703844 69704629 -33790345 + RMER17B LTR ERVK 53 863 -43 3 1116 707 319 31 31 chr15 69706197 69706420 -33788554 + B4 SINE B4 1 223 -69 3 1116 387 0 0 0 chr15 69706429 69706472 -33788502 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1116 385 312 0 150 chr15 69706628 69706775 -33788199 + ID_B1 SINE B4 11 135 -89 3 1116 263 242 97 0 chr15 69706730 69706792 -33788182 + B1_Mus1 SINE Alu 11 78 -70 3 1116 206 62 31 0 chr15 69706801 69706833 -33788141 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1116 297 0 0 0 chr15 69707173 69707206 -33787768 + (T)n Simple_repeat Simple_repeat 1 33 0 3 1116 810 67 0 0 chr15 69707206 69707310 -33787664 - B1_Mus2 SINE Alu 0 147 44 3 1116 325 182 127 25 chr15 69707249 69707328 -33787646 - RLTR25B LTR ERVK -519 509 423 3 1116 183 379 45 11 chr15 69707492 69707580 -33787394 - MIRb SINE MIR -170 98 8 3 1116 264 374 69 64 chr15 69708350 69708553 -33786421 + MLT1A1 LTR MaLR 1 204 -204 3 1116 387 0 0 0 chr15 69708607 69708650 -33786324 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 1116 842 78 7 21 chr15 69709992 69710136 -33784838 + (GAAA)n Simple_repeat Simple_repeat 1 142 0 3 1116 474 101 0 0 chr15 69710136 69710205 -33784769 + (GGAA)n Simple_repeat Simple_repeat 1 69 0 3 1116 24 32 0 0 chr15 69711452 69711483 -33783491 + AT_rich Low_complexity Low_complexity 1 31 0 3 1116 1055 44 12 12 chr15 69711614 69711774 -33783200 + (TG)n Simple_repeat Simple_repeat 1 160 0 3 1116 270 0 0 0 chr15 69711776 69711806 -33783168 + (GA)n Simple_repeat Simple_repeat 1 30 0 3 1116 288 193 0 24 chr15 69712041 69712126 -33782848 - Lx9 LINE L1 0 7644 7562 3 1116 3335 15 18 2 chr15 69712197 69712590 -33782384 - L1Md_F3 LINE L1 -16 6568 6170 3 1116 192 118 0 0 chr15 69712783 69712796 -33782178 + (CAAA)n Simple_repeat Simple_repeat 2 14 0 3 1116 1048 79 29 0 chr15 69712796 69712935 -33782039 + B1_Mus2 SINE Alu 5 147 0 3 1116 192 118 0 0 chr15 69712935 69712955 -33782019 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 3 1116 22 0 0 0 chr15 69713658 69713680 -33781294 + AT_rich Low_complexity Low_complexity 1 22 0 3 1116 344 224 10 0 chr15 69714157 69714255 -33780719 + CT-rich Low_complexity Low_complexity 3 101 0 3 1116 357 341 30 12 chr15 69714266 69714435 -33780539 + CT-rich Low_complexity Low_complexity 1 172 0 3 1116 1576 272 16 22 chr15 69714658 69715150 -33779824 - Lx6 LINE L1 -26 7434 6946 3 1116 1627 128 7 6 chr15 69715185 69715442 -33779532 + LTRIS_Mus LTR ERV1 349 603 -51 3 1116 1277 171 17 8 chr15 69715452 69715693 -33779281 + MuRRS-int LTR ERV1 31 273 -4417 3 1116 207 0 0 0 chr15 69715795 69715818 -33779156 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 1116 2557 255 27 55 chr15 69715818 69716717 -33778257 + MuRRS-int LTR ERV1 396 1269 -3794 3 1116 4350 168 9 20 chr15 69716786 69717800 -33777174 + MuRRS-int LTR ERV1 3332 4453 -237 3 1116 1758 329 19 32 chr15 69718580 69719693 -33775281 + RLTR6-int LTR ERV1 6666 7763 -15 3 1116 3813 132 14 48 chr15 69719693 69719708 -33775266 - RMER17A2 LTR ERVK -229 677 665 3 1116 4425 82 0 30 chr15 69719708 69720313 -33774661 + LTRIS_Mus LTR ERV1 1 587 0 3 1116 3813 132 14 48 chr15 69720313 69720998 -33773976 - RMER17A2 LTR ERVK -242 664 1 3 1116 400 335 114 29 chr15 69721107 69721415 -33773559 - MLT1A1 LTR MaLR -3 405 72 3 1116 371 319 131 52 chr15 69721549 69721817 -33773157 - B4A SINE B4 0 292 4 3 1116 248 246 0 0 chr15 69722052 69722117 -33772857 + A-rich Low_complexity Low_complexity 1 65 0 3 1116 29 28 0 0 chr15 69722674 69722710 -33772264 + AT_rich Low_complexity Low_complexity 1 36 0 3 1116 241 299 58 0 chr15 69722960 69723047 -33771927 - Lx7 LINE L1 -400 7296 7205 3 1116 216 143 0 0 chr15 69723108 69723150 -33771824 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 3 1116 424 366 89 34 chr15 69723292 69723617 -33771357 - ORR1D2 LTR MaLR -23 347 5 3 1116 396 0 0 0 chr15 69724583 69724627 -33770347 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 1116 216 175 0 0 chr15 69724876 69724916 -33770058 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1116 404 254 135 0 chr15 69725961 69726087 -33768887 + B1F SINE Alu 7 149 0 3 1116 229 338 38 0 chr15 69726090 69726170 -33768804 + Lx8 LINE L1 7065 7147 -326 3 1116 342 67 0 0 chr15 69726172 69726217 -33768757 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1116 412 231 78 48 chr15 69726217 69726485 -33768489 - RMER17D LTR ERVK -446 443 168 3 1116 220 275 14 28 chr15 69727742 69727813 -33767161 + PB1D7 SINE Alu 51 120 0 3 1116 280 185 0 0 chr15 69728195 69728249 -33766725 + Helitron2Na_Mam RC Helitron? 11 64 -260 3 1116 561 76 0 0 chr15 69728406 69728485 -33766489 + (TC)n Simple_repeat Simple_repeat 2 80 0 3 1116 3026 175 6 22 chr15 69728732 69729265 -33765709 - Lx4A LINE L1 -1 7057 6534 3 1116 348 306 20 0 chr15 69729272 69729370 -33765604 - RSINE1 SINE B4 -64 101 2 3 1116 40 0 0 0 chr15 69730249 69730289 -33764685 + AT_rich Low_complexity Low_complexity 1 40 0 3 1117 25 31 0 0 chr15 69731805 69731837 -33763137 + AT_rich Low_complexity Low_complexity 1 32 0 3 1117 409 320 103 80 chr15 69732818 69733157 -33761817 + ORR1E LTR MaLR 8 354 -5 3 1117 756 129 0 0 chr15 69734245 69734369 -33760605 + (TC)n Simple_repeat Simple_repeat 1 124 0 3 1117 1412 60 0 0 chr15 69734686 69734870 -33760104 - L1Md_A LINE L1 -2 6580 6397 3 1117 670 182 54 7 chr15 69735795 69735944 -33759030 - ORR1D2 LTR MaLR 0 370 215 3 1117 345 24 0 0 chr15 69735948 69735990 -33758984 + (TC)n Simple_repeat Simple_repeat 1 42 0 3 1117 747 42 0 0 chr15 69735990 69736084 -33758890 + (CA)n Simple_repeat Simple_repeat 1 95 0 3 1117 408 352 27 6 chr15 69737367 69737550 -33757424 - Lx8 LINE L1 -777 6696 6510 3 1117 758 364 99 18 chr15 69737561 69738104 -33756870 + Lx8 LINE L1 6882 7468 -5 3 1117 1313 96 21 0 chr15 69739269 69739457 -33755517 - B2_Mm2 SINE B2 -3 192 1 3 1117 358 319 0 17 chr15 69740362 69740477 -33754497 + ID_B1 SINE B4 72 184 -40 3 1117 246 343 0 62 chr15 69740378 69740490 -33754484 + PB1D10 SINE Alu 5 109 -8 3 1117 3192 156 28 0 chr15 69740492 69741037 -33753937 + Lx2 LINE L1 6141 6700 -297 3 1117 660 93 19 0 chr15 69741037 69741145 -33753829 + Lx2 LINE L1 6887 6996 -1 3 1117 541 327 13 7 chr15 69741952 69742106 -33752868 - B3A SINE B2 -16 182 28 3 1117 3677 36 0 0 chr15 69743572 69744010 -33750964 - L1Md_F2 LINE L1 -12 6570 6133 3 1117 3275 60 0 0 chr15 69744010 69744424 -33750550 + L1Md_F2 LINE L1 5751 6164 -418 3 1117 8035 35 0 0 chr15 69745179 69746794 -33748180 - L1Md_T LINE L1 -1 6581 4967 3 1117 448 318 86 32 chr15 69746815 69747186 -33747788 - L1M2 LINE L1 -3091 3052 2662 3 1117 282 95 0 0 chr15 69747460 69747502 -33747472 + (CATA)n Simple_repeat Simple_repeat 1 42 0 3 1117 585 42 0 0 chr15 69747833 69747905 -33747069 + (TG)n Simple_repeat Simple_repeat 1 72 0 3 1117 366 23 0 0 chr15 69747905 69747947 -33747027 + (GA)n Simple_repeat Simple_repeat 1 43 0 3 1117 267 140 0 0 chr15 69748068 69748118 -33746856 + (T)n Simple_repeat Simple_repeat 1 50 0 3 1117 204 40 0 0 chr15 69748299 69748324 -33746650 + (CAA)n Simple_repeat Simple_repeat 1 25 0 3 1117 724 214 0 11 chr15 69748533 69748713 -33746261 + GA-rich Low_complexity Low_complexity 3 180 0 3 1117 644 306 30 17 chr15 69750896 69751132 -33743842 - MT2A LTR ERVL -294 239 1 3 1117 445 312 37 21 chr15 69751818 69752008 -33742966 - B3A SINE B2 -1 197 5 3 1117 205 391 32 19 chr15 69752313 69752467 -33742507 + L2 LINE L2 2708 2863 -556 3 1117 863 222 25 49 chr15 69752694 69752898 -33742076 + B3 SINE B2 4 202 -14 3 1117 555 66 0 0 chr15 69754843 69754919 -33740055 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 1117 807 123 2 1 chr15 69755968 69756099 -33738875 - B1_Mus1 SINE Alu -16 133 2 3 1117 32 26 0 0 chr15 69756304 69756343 -33738631 + AT_rich Low_complexity Low_complexity 1 39 0 3 1117 2280 304 71 22 chr15 69756651 69757525 -33737449 + Lx7 LINE L1 6369 7285 -411 3 1117 306 0 0 0 chr15 69757664 69757698 -33737276 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 1117 22 0 0 0 chr15 69757698 69757720 -33737254 + AT_rich Low_complexity Low_complexity 1 22 0 3 1117 561 181 0 0 chr15 69757779 69757956 -33737018 + (TA)n Simple_repeat Simple_repeat 2 178 0 3 1117 180 152 0 0 chr15 69758032 69758065 -33736909 + T-rich Low_complexity Low_complexity 1 33 0 3 1117 755 222 0 0 chr15 69758110 69758254 -33736720 - B1_Mus1 SINE Alu -4 144 1 3 1117 319 256 159 53 chr15 69758255 69758387 -33736587 - B3 SINE B2 -1 215 70 3 1117 387 41 0 0 chr15 69758391 69758440 -33736534 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1117 433 259 27 27 chr15 69759117 69759228 -33735746 + B3A SINE B2 6 116 -82 4 1117 342 256 39 0 chr15 69759204 69759282 -33735692 - B1F SINE Alu -54 95 15 4 1117 1296 244 80 5 chr15 69759442 69759830 -33735144 - MTD LTR MaLR 0 419 3 4 1117 4238 93 22 0 chr15 69759906 69760541 -33734433 - L1_Mur1 LINE L1 -1600 4286 3638 4 1117 4419 113 14 9 chr15 69760540 69761230 -33733744 + Lx3A LINE L1 5955 6648 -333 4 1117 1534 75 0 5 chr15 69761230 69761430 -33733544 + RMER17A-int LTR ERVK 1126 1324 -404 4 1117 290 167 19 0 chr15 69761432 69761486 -33733488 - RMER17A-int LTR ERVK -1673 55 1 4 1117 4944 130 47 15 chr15 69761489 69762349 -33732625 - RMER17D LTR ERVK -2 887 1 4 1117 1775 160 0 10 chr15 69762349 69762658 -33732316 + Lx3A LINE L1 6660 6965 -16 4 1117 234 0 0 0 chr15 69762660 69762686 -33732288 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 4 1117 430 340 66 37 chr15 69762707 69762951 -33732023 + MLT1A0 LTR MaLR 94 344 -21 4 1117 863 62 0 0 chr15 69763559 69763672 -33731302 - Lx LINE L1 -287 6367 6255 4 1117 21 0 0 0 chr15 69764140 69764161 -33730813 + AT_rich Low_complexity Low_complexity 1 21 0 4 1117 184 30 61 0 chr15 69765068 69765101 -33729873 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 4 1117 6217 125 17 22 chr15 69765113 69765865 -33729109 - Lx LINE L1 -25 6629 5873 4 1117 282 20 39 39 chr15 69765865 69765917 -33729057 + (TTTG)n Simple_repeat Simple_repeat 4 55 0 4 1117 768 150 87 0 chr15 69765918 69766045 -33728929 - B1_Mus1 SINE Alu -7 141 4 4 1117 6217 125 17 22 chr15 69766045 69766275 -33728699 - Lx LINE L1 -782 5872 5650 4 1117 276 170 0 0 chr15 69766407 69766460 -33728514 + (TTA)n Simple_repeat Simple_repeat 2 54 0 4 1117 283 299 115 59 chr15 69766712 69766953 -33728021 - L1M2 LINE L1 -433 5858 5609 4 1117 180 0 0 0 chr15 69766953 69766973 -33728001 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1117 283 299 115 59 chr15 69766973 69767157 -33727817 - L1M2 LINE L1 -683 5608 5410 4 1117 342 0 0 0 chr15 69767175 69767213 -33727761 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1117 673 341 126 0 chr15 69767227 69767482 -33727492 - B4A SINE B4 -4 288 2 4 1117 23 0 0 0 chr15 69767941 69767964 -33727010 + AT_rich Low_complexity Low_complexity 1 23 0 4 1117 1035 252 20 8 chr15 69769145 69769397 -33725577 - Lx6 LINE L1 -27 7433 7179 4 1117 1459 196 6 25 chr15 69769415 69769740 -33725234 + Lx6 LINE L1 5623 5941 -1519 4 1117 324 0 0 0 chr15 69770694 69770730 -33724244 + (TC)n Simple_repeat Simple_repeat 2 37 0 4 1117 255 357 96 19 chr15 69770766 69770923 -33724051 + MLT1B LTR MaLR 1 169 -221 4 1117 873 69 0 0 chr15 69770955 69771085 -33723889 + (TC)n Simple_repeat Simple_repeat 1 130 0 4 1117 351 44 0 0 chr15 69771085 69771129 -33723845 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1117 322 278 11 0 chr15 69771160 69771250 -33723724 + MLT1B LTR MaLR 263 353 -37 4 1117 683 144 35 14 chr15 69771914 69772055 -33722919 - Lx3_Mus LINE L1 -16 6993 6850 4 1117 212 243 25 114 chr15 69772939 69773018 -33721956 - MIRb SINE MIR -76 192 121 4 1117 332 394 56 28 chr15 69773080 69773404 -33721570 - MLT1A LTR MaLR -41 333 1 4 1117 324 120 0 0 chr15 69774910 69774960 -33720014 + (T)n Simple_repeat Simple_repeat 1 50 0 4 1117 930 78 0 0 chr15 69774960 69775089 -33719885 - B1_Mm SINE Alu 0 147 19 4 1117 300 347 54 43 chr15 69775212 69775492 -33719482 + MER33 DNA MER1_type 2 284 -40 4 1117 201 162 0 0 chr15 69775522 69775559 -33719415 + A-rich Low_complexity Low_complexity 4 40 0 4 1117 349 217 136 36 chr15 69775561 69775671 -33719303 - MTE2b LTR MaLR -37 342 222 4 1117 7038 179 23 18 chr15 69775671 69777102 -33717872 + L1_Mur2 LINE L1 3908 5346 -531 4 1117 35756 40 4 3 chr15 69777097 69782050 -33712924 + L1Md_T LINE L1 675 5586 -297 4 1117 8112 51 0 0 chr15 69782050 69783044 -33711930 + L1Md_T LINE L1 5587 6580 -2 4 1117 6659 130 37 8 chr15 69783057 69784312 -33710662 + Lx LINE L1 5360 6646 -8 4 1117 445 244 40 0 chr15 69784312 69784419 -33710555 - MTE2b LTR MaLR -119 260 158 4 1117 305 304 65 0 chr15 69784530 69784622 -33710352 - MTE2b LTR MaLR -281 98 1 4 1117 22 35 0 0 chr15 69785198 69785227 -33709747 + AT_rich Low_complexity Low_complexity 1 29 0 4 1117 237 229 111 28 chr15 69785529 69785601 -33709373 + MLT1A1 LTR MaLR 1 78 -330 4 1117 328 293 20 10 chr15 69785795 69785895 -33709079 + MLT1A1 LTR MaLR 308 408 0 4 1117 348 269 107 146 chr15 69786699 69786960 -33708014 + MTE2a LTR MaLR 125 375 -4 4 1117 951 258 130 34 chr15 69787614 69787907 -33707067 + ORR1D2 LTR MaLR 41 361 -13 4 1117 1857 306 62 39 chr15 69788067 69788845 -33706129 + Lx7 LINE L1 6130 6925 -771 4 1117 2911 40 0 0 chr15 69790404 69790750 -33704224 - ORR1A0 LTR MaLR 0 346 1 4 1117 884 309 72 4 chr15 69791001 69791264 -33703710 - B4A SINE B4 -10 282 2 4 1117 365 316 126 32 chr15 69791272 69791550 -33703424 - L1M5 LINE L1 -847 5299 4996 4 1117 228 306 36 47 chr15 69791609 69791801 -33703173 - L1MD LINE L1 -1210 4936 4747 4 1117 394 334 97 31 chr15 69791866 69792258 -33702716 - L1M5 LINE L1 -1428 4718 4301 4 1117 285 29 0 0 chr15 69792351 69792385 -33702589 + (TTAA)n Simple_repeat Simple_repeat 4 37 0 4 1117 243 296 46 9 chr15 69792690 69792821 -33702153 - L1M5 LINE L1 -2091 4055 3920 4 1117 387 0 0 0 chr15 69793162 69793205 -33701769 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1117 335 413 22 7 chr15 69793248 69793387 -33701587 - RSINE1 SINE B4 -21 144 4 4 1117 309 169 0 0 chr15 69795367 69795426 -33699548 + CT-rich Low_complexity Low_complexity 4 62 0 4 1117 3570 55 39 0 chr15 69796223 69796681 -33698293 + L1Md_F2 LINE L1 5111 5586 -297 4 1117 7781 51 6 2 chr15 69796682 69797673 -33697301 + L1Md_F2 LINE L1 5588 6582 0 4 1117 585 348 54 45 chr15 69797913 69798908 -33696066 + L1MEf LINE L1 1887 2891 -3255 4 1117 4784 57 7 0 chr15 69798994 69799596 -33695378 + L1Md_F2 LINE L1 5977 6582 0 4 1117 334 304 103 7 chr15 69799937 69800209 -33694765 + L1MD2 LINE L1 5652 5949 -410 4 1117 775 130 48 0 chr15 69800476 69800622 -33694352 + Lx LINE L1 6502 6654 0 4 1117 259 353 76 51 chr15 69801044 69801202 -33693772 - LTR16A LTR ERVL -115 336 175 4 1117 249 256 53 43 chr15 69801555 69801649 -33693325 + MER53 DNA hAT 15 109 -84 4 1117 4076 207 36 7 chr15 69803364 69804383 -33690591 - Lx4B LINE L1 -268 6708 5587 4 1117 2722 85 72 45 chr15 69804424 69804843 -33690131 - L1_Mus2 LINE L1 -1 6565 6136 4 1117 1776 113 45 0 chr15 69804843 69805109 -33689865 - RLTR9B LTR ERVK -159 278 1 4 1117 12560 126 76 15 chr15 69805111 69805645 -33689329 - L1Md_F LINE L1 -2303 3580 3062 4 1117 396 0 0 0 chr15 69805645 69805689 -33689285 + (TTG)n Simple_repeat Simple_repeat 2 45 0 4 1117 12560 153 74 22 chr15 69805689 69808221 -33686753 - L1Md_F LINE L1 -2822 3061 348 4 1117 201 196 0 0 chr15 69808595 69808641 -33686333 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1117 372 285 150 12 chr15 69808641 69808801 -33686173 - B3A SINE B2 -16 182 1 4 1117 27 81 0 0 chr15 69809360 69809422 -33685552 + AT_rich Low_complexity Low_complexity 1 62 0 4 1117 22 0 0 0 chr15 69809562 69809584 -33685390 + AT_rich Low_complexity Low_complexity 1 22 0 4 1117 389 333 57 6 chr15 69809807 69809982 -33684992 - Charlie1a DNA MER1_type -565 890 707 4 1117 302 229 43 0 chr15 69810331 69810401 -33684573 + PB1D10 SINE Alu 45 117 0 4 1117 471 78 0 0 chr15 69810653 69810717 -33684257 + (TG)n Simple_repeat Simple_repeat 2 65 0 4 1117 189 0 0 0 chr15 69810833 69810854 -33684120 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1117 180 111 0 0 chr15 69811129 69811156 -33683818 + (TTC)n Simple_repeat Simple_repeat 2 28 0 4 1117 1679 125 4 8 chr15 69811612 69811877 -33683097 - Lx3B LINE L1 -620 6353 6090 4 1117 3593 161 13 0 chr15 69811877 69812493 -33682481 + Lx3B LINE L1 6345 6968 -5 4 1117 24 67 0 0 chr15 69812496 69812541 -33682433 + AT_rich Low_complexity Low_complexity 1 45 0 4 1117 374 133 22 22 chr15 69813650 69813742 -33681232 + CT-rich Low_complexity Low_complexity 2 93 0 4 1117 661 282 26 0 chr15 69813994 69814150 -33680824 + B3A SINE B2 1 160 -38 4 1117 333 206 41 0 chr15 69814150 69814223 -33680751 - Lx3A LINE L1 -353 7107 7032 4 1117 4836 201 83 13 chr15 69814212 69814686 -33680288 - L1_Mur3 LINE L1 -3287 2593 2065 4 1117 195 100 0 0 chr15 69814686 69814716 -33680258 + (TGG)n Simple_repeat Simple_repeat 3 32 0 4 1117 4836 210 71 37 chr15 69814716 69815867 -33679107 - L1_Mur3 LINE L1 -3816 2064 906 4 1117 2781 224 87 8 chr15 69815898 69817424 -33677550 - Lx5 LINE L1 -7 7043 5362 4 1117 207 0 0 0 chr15 69817428 69817451 -33677523 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 1117 1103 67 0 0 chr15 69817452 69817587 -33677387 - B1_Mus2 SINE Alu -12 135 1 4 1117 30 0 0 0 chr15 69817605 69817635 -33677339 + AT_rich Low_complexity Low_complexity 1 30 0 4 1117 8082 147 41 52 chr15 69817635 69819532 -33675442 - Lx3A LINE L1 -2 6979 5171 4 1117 261 0 0 0 chr15 69819532 69819561 -33675413 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1117 5293 189 36 131 chr15 69819561 69820248 -33674726 - Lx3A LINE L1 -707 5170 4514 4 1117 829 211 17 0 chr15 69820249 69820485 -33674489 - Lx3A LINE L1 -6449 1279 979 4 1117 2816 39 3 0 chr15 69821010 69821341 -33673633 + IAPEY3_LTR LTR ERVK 1 332 0 4 1117 843 352 81 23 chr15 69822045 69822692 -33672282 - Lx3A LINE L1 -7042 686 17 4 1117 22 0 0 0 chr15 69823810 69823832 -33671142 + AT_rich Low_complexity Low_complexity 1 22 0 4 1117 340 335 37 31 chr15 69824153 69824344 -33670630 - L1MD1 LINE L1 0 6242 6051 4 1117 240 291 49 37 chr15 69824556 69824638 -33670336 - ORR1E LTR MaLR -262 97 15 4 1117 324 305 109 40 chr15 69824638 69824812 -33670162 + L1MC LINE L1 5595 5780 -2262 4 1117 3213 124 5 4 chr15 69824817 69825448 -33669526 - Lx3B LINE L1 -964 6009 5381 4 1117 4212 125 75 4 chr15 69825477 69826129 -33668845 + L1_Mur1 LINE L1 4590 5291 -595 4 1117 5297 113 94 25 chr15 69826129 69827046 -33667928 + Lx3_Mus LINE L1 6030 7009 0 4 1117 4212 125 75 4 chr15 69827046 69827116 -33667858 + L1_Mur1 LINE L1 5292 5363 -523 4 1117 289 293 6 43 chr15 69827108 69827272 -33667702 - L1MDa LINE L1 -956 5581 5424 4 1117 258 312 10 0 chr15 69827400 69827496 -33667478 - L1MDa LINE L1 -6233 400 304 4 1117 450 96 0 0 chr15 69827511 69827584 -33667390 + (TTTC)n Simple_repeat Simple_repeat 2 74 0 4 1117 9243 63 0 3 chr15 69829671 69830872 -33664102 + L1Md_F2 LINE L1 4390 5586 -297 4 1117 8282 41 0 1 chr15 69830872 69831866 -33663108 + L1Md_F2 LINE L1 5587 6579 -3 4 1117 2673 85 59 0 chr15 69832334 69832709 -33662265 - L1_Mus1 LINE L1 -283 6284 5888 4 1117 1595 97 70 0 chr15 69832707 69832934 -33662040 + L1_Mus1 LINE L1 6293 6535 -32 4 1117 564 139 48 38 chr15 69833324 69833429 -33661545 - B1_Mus2 SINE Alu 0 147 42 4 1117 8373 153 13 36 chr15 69834665 69836540 -33658434 - Lx2B LINE L1 0 7000 5155 4 1117 330 45 0 0 chr15 69836540 69836584 -33658390 + (GTTTG)n Simple_repeat Simple_repeat 2 45 0 4 1117 6335 188 16 27 chr15 69836584 69837223 -33657751 - Lx2B LINE L1 -732 5154 4539 4 1117 1672 221 17 88 chr15 69837310 69837717 -33657257 - ORR1C1 LTR MaLR 0 378 1 5 1117 1276 183 8 8 chr15 69837712 69837960 -33657014 - ORR1C1-int LTR MaLR 0 1509 1262 5 1117 1072 278 75 30 chr15 69837980 69838380 -33656594 - ORR1C1-int LTR MaLR -558 951 534 5 1117 1309 194 52 0 chr15 69838383 69838631 -33656343 + RMER6D LTR ERVK 445 705 -15 5 1117 1075 294 77 24 chr15 69839748 69840125 -33654849 + MTD LTR MaLR 23 419 0 5 1117 399 73 0 0 chr15 69840685 69840740 -33654234 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 5 1117 930 281 38 4 chr15 69840877 69841138 -33653836 + Lx6 LINE L1 7022 7291 -169 5 1117 23 33 0 0 chr15 69842857 69842887 -33652087 + AT_rich Low_complexity Low_complexity 1 30 0 5 1117 608 0 14 0 chr15 69844081 69844153 -33650821 + (TA)n Simple_repeat Simple_repeat 1 73 0 5 1117 3712 87 22 2 chr15 69844366 69844875 -33650099 + L1_Mus2 LINE L1 6048 6566 0 5 1117 411 167 0 25 chr15 69845779 69845859 -33649115 + ORR1C1-int LTR MaLR 1432 1509 0 5 1117 1583 212 35 59 chr15 69845867 69846238 -33648736 + ORR1C1 LTR MaLR 9 370 -8 5 1117 1494 132 74 11 chr15 69846623 69846892 -33648082 + L1_Mus4 LINE L1 6344 6629 -7 5 1117 753 320 8 26 chr15 69846905 69847139 -33647835 + B4A SINE B4 27 256 -36 5 1117 194 242 0 0 chr15 69847241 69847274 -33647700 + L2b LINE L2 3322 3354 -21 5 1117 243 266 20 60 chr15 69847477 69847577 -33647397 - MIR SINE MIR -7 255 160 5 1117 1079 123 0 16 chr15 69847760 69847942 -33647032 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 5 1117 360 317 135 39 chr15 69847974 69848204 -33646770 - MER2 DNA MER2_type -1 344 93 5 1117 186 227 0 0 chr15 69848263 69848307 -33646667 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 5 1117 415 373 8 10 chr15 69848595 69848773 -33646201 - B4A SINE B4 -35 257 82 5 1117 17304 21 0 0 chr15 69848773 69850958 -33644016 - L1Md_T LINE L1 -520 6062 3878 5 1117 3776 77 0 0 chr15 69850964 69851458 -33643516 + L1Md_T LINE L1 6089 6582 0 5 1117 543 31 0 0 chr15 69851557 69851622 -33643352 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1117 240 111 0 0 chr15 69852875 69852911 -33642063 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1117 267 342 25 32 chr15 69853732 69853889 -33641085 - Lx8 LINE L1 -252 7221 7066 5 1117 297 0 0 0 chr15 69854425 69854458 -33640516 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1117 2935 187 39 11 chr15 69854460 69855070 -33639904 - Lx5 LINE L1 -805 6245 5619 5 1117 477 314 48 56 chr15 69857641 69858033 -33636941 - L1MA10 LINE L1 -22 6312 5924 5 1117 227 255 104 0 chr15 69858097 69858203 -33636771 + L1M3 LINE L1 4258 4374 -1769 5 1117 351 0 0 0 chr15 69858268 69858307 -33636667 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1117 802 289 14 24 chr15 69858695 69858908 -33636066 + B3 SINE B2 6 216 0 5 1117 325 335 31 5 chr15 69858938 69859130 -33635844 + L1M3 LINE L1 4784 4980 -1160 5 1117 1403 152 51 108 chr15 69859140 69859473 -33635501 - Lx3C LINE L1 0 6976 6663 5 1117 564 327 78 22 chr15 69860915 69861146 -33633828 + MTE2b LTR MaLR 11 254 -125 5 1118 776 67 8 0 chr15 69862049 69862169 -33632805 + (TC)n Simple_repeat Simple_repeat 1 121 0 5 1118 252 0 0 0 chr15 69862169 69862196 -33632778 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1118 194 387 26 32 chr15 69862817 69862972 -33632002 + MIRb SINE MIR 26 179 -89 5 1118 261 0 0 0 chr15 69863856 69863885 -33631089 + (TTTAG)n Simple_repeat Simple_repeat 5 33 0 5 1118 213 94 0 0 chr15 69864575 69864607 -33630367 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1118 227 323 77 13 chr15 69864895 69864996 -33629978 + MIR SINE MIR 1 111 -97 5 1118 1760 280 123 51 chr15 69866230 69866929 -33628045 - Lx6 LINE L1 -311 7149 6301 5 1118 485 16 0 16 chr15 69866929 69866992 -33627982 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 1118 1760 267 98 59 chr15 69866992 69867374 -33627600 - Lx6 LINE L1 -1160 6300 5948 5 1118 586 262 20 50 chr15 69867392 69867593 -33627381 + Lx6 LINE L1 7258 7452 -8 5 1118 1285 259 69 3 chr15 69867957 69868306 -33626668 + MTD LTR MaLR 34 405 -14 5 1118 278 303 118 89 chr15 69869151 69869410 -33625564 + B4A SINE B4 14 281 -11 5 1118 722 278 72 95 chr15 69869561 69870264 -33624710 + L1M2 LINE L1 3498 4184 -1959 5 1118 305 277 18 48 chr15 69870659 69870826 -33624148 - L1M4 LINE L1 -6359 183 22 5 1118 33 25 0 0 chr15 69871464 69871504 -33623470 + AT_rich Low_complexity Low_complexity 1 40 0 5 1118 517 331 134 24 chr15 69872347 69872638 -33622336 - MTE2a LTR MaLR -1 378 56 5 1118 333 174 0 0 chr15 69872654 69872723 -33622251 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 1118 367 288 44 25 chr15 69872726 69872886 -33622088 + Lx6 LINE L1 7296 7458 -2 5 1118 190 292 15 44 chr15 69874375 69874443 -33620531 - L2c LINE L2 -30 3357 3292 5 1118 228 277 5 68 chr15 69875332 69875429 -33619545 + MIRc SINE MIR 97 192 -70 5 1118 339 181 0 0 chr15 69875711 69875783 -33619191 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 1118 767 134 28 7 chr15 69875931 69876074 -33618900 + Lx2 LINE L1 6852 6997 0 5 1118 432 0 0 0 chr15 69877392 69877440 -33617534 + (A)n Simple_repeat Simple_repeat 1 48 0 5 1118 539 339 25 36 chr15 69878016 69878212 -33616762 + B4 SINE B4 1 194 -98 5 1118 352 312 0 59 chr15 69878112 69878231 -33616743 + B1F2 SINE Alu 13 124 -25 5 1118 291 190 0 0 chr15 69878324 69878382 -33616592 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 1118 206 258 0 21 chr15 69878998 69879093 -33615881 + (TATG)n Simple_repeat Simple_repeat 4 96 0 5 1118 542 351 38 47 chr15 69879108 69879614 -33615360 - Lx9 LINE L1 -127 7517 7017 5 1118 4829 167 2 6 chr15 69879914 69880569 -33614405 - L1_Mm LINE L1 -494 5389 4737 5 1118 315 52 52 0 chr15 69880569 69880627 -33614347 + (TTG)n Simple_repeat Simple_repeat 2 62 0 5 1118 4829 167 2 6 chr15 69880627 69880826 -33614148 - L1_Mm LINE L1 -1147 4736 4538 5 1118 6899 160 38 23 chr15 69880828 69882413 -33612561 + L1_Mus4 LINE L1 5406 6970 -3 5 1118 22 35 0 0 chr15 69883352 69883381 -33611593 + AT_rich Low_complexity Low_complexity 1 29 0 5 1118 28 79 0 0 chr15 69884391 69884454 -33610520 + AT_rich Low_complexity Low_complexity 1 63 0 5 1118 21 57 0 0 chr15 69884686 69884721 -33610253 + AT_rich Low_complexity Low_complexity 1 35 0 5 1118 402 21 0 0 chr15 69884822 69884869 -33610105 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1118 1197 254 51 6 chr15 69884875 69885188 -33609786 - Lx9 LINE L1 -208 7436 7110 5 1118 679 268 53 31 chr15 69885188 69885415 -33609559 + Lx9 LINE L1 6848 7079 -565 5 1118 588 229 153 30 chr15 69888193 69888396 -33606578 - RLTR15 LTR ERVK -131 228 1 5 1118 13196 227 92 13 chr15 69888612 69890616 -33604358 - L1_Mur2 LINE L1 -203 5677 3644 5 1118 342 0 0 0 chr15 69890616 69890654 -33604320 + (TC)n Simple_repeat Simple_repeat 1 38 0 5 1118 13196 223 82 18 chr15 69890654 69892871 -33602103 - L1_Mur2 LINE L1 -2237 3643 1131 5 1118 398 127 14 0 chr15 69892883 69892954 -33602020 + (TTTC)n Simple_repeat Simple_repeat 2 73 0 5 1118 598 226 165 71 chr15 69895188 69895455 -33599519 - L1_Mur2 LINE L1 -5859 1125 834 5 1118 405 0 0 0 chr15 69897368 69897413 -33597561 + (TAGA)n Simple_repeat Simple_repeat 3 47 0 5 1118 2368 250 19 35 chr15 69897416 69897980 -33596994 + RLTR21 LTR ERVK 6 560 -1012 5 1118 320 161 0 0 chr15 69898018 69898074 -33596900 + RLTR21 LTR ERVK 562 617 -955 5 1118 994 217 14 43 chr15 69898107 69898386 -33596588 + MYSERV16_I-int LTR ERVK 1 271 -2055 5 1118 909 312 94 35 chr15 69898405 69898860 -33596114 + RLTR20B2 LTR ERVK 22 503 -57 5 1118 1747 238 17 133 chr15 69898988 69899716 -33595258 + RLTR25B LTR ERVK 21 672 -431 5 1118 1083 220 154 131 chr15 69899552 69899717 -33595257 + ORR1A3-int LTR MaLR 430 739 -1224 5 1118 1316 176 54 62 chr15 69899717 69899977 -33594997 + MT2B LTR ERVL 35 292 -309 5 1118 718 244 109 112 chr15 69899870 69900263 -33594711 + RLTR25A LTR ERVK 521 912 -191 5 1118 1083 220 154 131 chr15 69899977 69900117 -33594857 + ORR1A3-int LTR MaLR 740 1007 -956 5 1118 277 208 139 0 chr15 69900278 69900350 -33594624 + RLTR25A LTR ERVK 947 1028 0 5 1118 498 304 130 6 chr15 69900352 69900521 -33594453 - RMER15 LTR ERVL -101 474 285 5 1118 1034 123 0 0 chr15 69902111 69902257 -33592717 + B1_Mus1 SINE Alu 1 146 -2 5 1118 6929 96 26 2 chr15 69902392 69903441 -33591533 + L1_Mus3 LINE L1 5530 6638 0 5 1118 405 16 48 0 chr15 69903477 69903539 -33591435 + (TTG)n Simple_repeat Simple_repeat 2 66 0 5 1118 626 293 89 32 chr15 69904153 69904738 -33590236 - L1MC1 LINE L1 -165 6168 5551 5 1118 257 202 35 35 chr15 69905120 69905207 -33589767 - L1MC1 LINE L1 -2280 5505 5419 5 1118 710 204 42 0 chr15 69905409 69905551 -33589423 - URR1B DNA MER1_type -13 212 65 5 1118 230 143 20 0 chr15 69906572 69906621 -33588353 + CT-rich Low_complexity Low_complexity 3 52 0 5 1118 2710 77 91 1 chr15 69908431 69908900 -33586074 - Lx3A LINE L1 -1028 5953 5456 5 1118 1724 137 0 39 chr15 69908899 69909233 -33585741 + Lx3_Mus LINE L1 5952 6272 -737 5 1118 390 137 0 0 chr15 69909232 69909305 -33585669 - Lx2A1 LINE L1 -291 6717 6645 5 1118 24 53 0 0 chr15 69909822 69909860 -33585114 + AT_rich Low_complexity Low_complexity 1 38 0 5 1118 186 103 0 0 chr15 69910352 69910381 -33584593 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 1118 1019 237 41 44 chr15 69910425 69910765 -33584209 + L1_Mur3 LINE L1 5261 5599 -281 5 1118 4522 241 65 20 chr15 69910766 69912049 -33582925 + Lx7 LINE L1 6353 7693 -3 5 1118 215 214 56 11 chr15 69912235 69912325 -33582649 + (TA)n Simple_repeat Simple_repeat 2 95 0 5 1118 269 267 13 0 chr15 69912394 69912469 -33582505 + Lx7 LINE L1 7271 7346 -350 5 1118 206 218 45 22 chr15 69912474 69912563 -33582411 + (TA)n Simple_repeat Simple_repeat 1 91 0 5 1118 3293 115 25 19 chr15 69912610 69913177 -33581797 + L1_Mur1 LINE L1 5015 5584 -302 5 1118 34407 57 0 9 chr15 69913175 69918740 -33576234 + Lx3_Mus LINE L1 1 5589 -297 5 1118 8480 33 0 0 chr15 69918740 69919736 -33575238 + L1Md_T LINE L1 5587 6582 0 5 1118 34407 153 29 34 chr15 69919736 69920848 -33574126 + Lx3_Mus LINE L1 5590 6639 -2 5 1118 2533 135 14 19 chr15 69920846 69921275 -33573699 + Lx3A LINE L1 6553 6979 -2 5 1118 450 127 0 0 chr15 69921298 69921369 -33573605 + (GA)n Simple_repeat Simple_repeat 2 72 0 5 1118 180 0 0 0 chr15 69921443 69921463 -33573511 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 1118 284 287 53 33 chr15 69922868 69923010 -33571964 + MIR SINE MIR 122 268 0 5 1118 450 0 0 0 chr15 69923610 69923660 -33571314 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1118 608 304 57 5 chr15 69923674 69923866 -33571108 + B3 SINE B2 1 202 -14 6 1118 358 347 7 13 chr15 69923876 69924025 -33570949 - RMER12 LTR ERVK -467 855 708 6 1118 257 236 102 92 chr15 69925258 69925356 -33569618 + RMER15 LTR ERVL 437 535 -40 6 1118 364 33 49 16 chr15 69925484 69925545 -33569429 + (TTTTG)n Simple_repeat Simple_repeat 3 65 0 6 1118 1101 82 0 13 chr15 69925546 69925695 -33569279 - B1_Mus1 SINE Alu -1 147 1 6 1118 951 107 0 0 chr15 69925806 69925946 -33569028 + L1_Mus2 LINE L1 6427 6566 0 6 1118 315 291 95 41 chr15 69926110 69926257 -33568717 + MLT1F-int LTR MaLR 1000 1154 -335 6 1118 402 74 0 0 chr15 69926327 69926381 -33568593 + (GGGA)n Simple_repeat Simple_repeat 4 57 0 6 1118 273 211 156 13 chr15 69926383 69926460 -33568514 + MTC LTR MaLR 1 88 -333 6 1118 3812 166 30 21 chr15 69926462 69927254 -33567720 - Lx3C LINE L1 -290 6686 5888 6 1118 441 0 0 0 chr15 69927421 69927470 -33567504 + (TA)n Simple_repeat Simple_repeat 2 50 0 6 1118 744 258 319 33 chr15 69927534 69927772 -33567202 + MTC LTR MaLR 108 413 -8 6 1118 4571 214 51 118 chr15 69927775 69928851 -33566123 + MTC-int LTR MaLR 2 1075 -183 6 1118 713 65 24 8 chr15 69928851 69928974 -33566000 - L1_Mus3 LINE L1 -7 6631 6507 6 1118 4571 214 51 118 chr15 69928974 69929049 -33565925 + MTC-int LTR MaLR 1076 1079 -179 6 1118 4182 115 50 43 chr15 69929049 69929792 -33565182 - RMER17A LTR ERVK -3 748 1 6 1118 4571 214 51 118 chr15 69929792 69929807 -33565167 + MTC-int LTR MaLR 1080 1082 -176 6 1118 1486 189 0 21 chr15 69929807 69930088 -33564886 - Lx3C LINE L1 -9 6967 6693 6 1118 551 15 15 0 chr15 69930098 69930166 -33564808 + (TTTTG)n Simple_repeat Simple_repeat 4 72 0 6 1118 1121 58 0 0 chr15 69930168 69930305 -33564669 - B1_Mus1 SINE Alu -10 138 2 6 1118 4571 214 51 118 chr15 69930305 69930469 -33564505 + MTC-int LTR MaLR 1089 1258 0 6 1118 574 163 10 0 chr15 69930469 69930567 -33564407 + MTC LTR MaLR 1 99 -322 6 1118 1620 260 35 29 chr15 69930567 69931046 -33563928 + Lx5 LINE L1 6555 7036 -14 6 1118 1169 101 0 11 chr15 69931046 69931226 -33563748 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 6 1118 1531 207 19 13 chr15 69931236 69931544 -33563430 + MTC LTR MaLR 110 419 -2 6 1118 2626 211 75 28 chr15 69932065 69932678 -33562296 + RLTR26 LTR ERVK 1 642 0 6 1118 1514 107 139 29 chr15 69932941 69933250 -33561724 - Lx LINE L1 -14 6640 6298 6 1118 37 39 0 0 chr15 69934537 69934588 -33560386 + AT_rich Low_complexity Low_complexity 1 51 0 6 1118 229 314 68 30 chr15 69934594 69934890 -33560084 - L1MA6 LINE L1 -134 6166 5860 6 1118 3790 65 34 4 chr15 69935085 69935592 -33559382 + L1Md_F2 LINE L1 6061 6582 0 6 1118 488 379 52 0 chr15 69935925 69936215 -33558759 - Lx8 LINE L1 -115 7358 7054 6 1118 245 301 42 58 chr15 69936268 69936388 -33558586 + MLT1D LTR MaLR 1 118 -387 6 1118 580 321 88 49 chr15 69936467 69936775 -33558199 - MTE-int LTR MaLR -152 1428 1109 6 1118 3201 200 43 17 chr15 69936779 69937492 -33557482 - Lx2B LINE L1 -3 6997 6266 6 1118 507 269 48 118 chr15 69937492 69937726 -33557248 - MTE-int LTR MaLR -670 1293 929 6 1118 6357 122 7 4 chr15 69937753 69939024 -33555950 + L1VL4 LINE L1 1013 2288 -3595 6 1118 5066 171 183 2 chr15 69939030 69940275 -33554699 + L1_Mur2 LINE L1 3014 4484 -1393 6 1118 2095 251 52 66 chr15 69940285 69941090 -33553884 - RMER17D2 LTR ERVK -15 794 1 6 1118 8148 108 18 2 chr15 69941090 69943090 -33551884 + L1_Mus2 LINE L1 4485 6514 -52 6 1118 2840 65 10 15 chr15 69943090 69943480 -33551494 + RLTR10 LTR ERVK 1 388 -2 6 1118 459 108 0 0 chr15 69943484 69943558 -33551416 + L1_Mus3 LINE L1 6558 6631 -7 6 1118 320 250 73 0 chr15 69943579 69943647 -33551327 - B1_Mur4 SINE Alu -77 73 1 6 1118 344 246 0 0 chr15 69943648 69943713 -33551261 - 4.5SRNA scRNA scRNA -3 91 27 6 1118 249 326 58 43 chr15 69943986 69944124 -33550850 + MLT1D LTR MaLR 366 505 0 6 1118 180 361 12 12 chr15 69944876 69944960 -33550014 - MIRb SINE MIR -125 143 60 6 1118 2028 270 156 28 chr15 69945364 69946077 -33548897 - Lx6 LINE L1 -27 7433 6630 6 1118 5949 86 5 0 chr15 69946149 69946950 -33548024 - L1_Mus1 LINE L1 -62 5821 5017 6 1118 5570 82 0 0 chr15 69946950 69947682 -33547292 + L1_Mus1 LINE L1 5835 6566 -1 6 1118 4925 128 23 13 chr15 69947959 69948744 -33546230 + Lx LINE L1 5858 6650 -4 6 1118 440 149 16 0 chr15 69949011 69949132 -33545842 + (TAGA)n Simple_repeat Simple_repeat 4 126 0 6 1118 556 308 15 51 chr15 69951026 69951221 -33543753 - B3 SINE B2 -24 192 5 6 1118 601 286 37 46 chr15 69951950 69952184 -33542790 - MTD LTR MaLR -160 261 12 6 1118 213 94 0 0 chr15 69952363 69952395 -33542579 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1118 316 40 20 20 chr15 69952687 69952738 -33542236 + (TTTTTG)n Simple_repeat Simple_repeat 2 52 0 6 1118 402 21 0 0 chr15 69952829 69952876 -33542098 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1118 560 333 127 37 chr15 69952895 69953376 -33541598 + L1MD LINE L1 3012 3535 -2611 6 1118 660 305 170 28 chr15 69953571 69954583 -33540391 + L1MD LINE L1 3793 4948 -1198 6 1118 22 0 0 30 chr15 69954712 69954729 -33540245 + AT_rich Low_complexity Low_complexity 1 17 0 6 1118 7789 100 10 25 chr15 69954729 69955823 -33539151 - Lx3_Mus LINE L1 0 7009 5921 6 1118 1048 124 6 6 chr15 69955823 69956002 -33538972 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 6 1118 7789 100 10 25 chr15 69956002 69956108 -33538866 - Lx3_Mus LINE L1 -1089 5920 5827 6 1118 22 0 0 30 chr15 69956108 69956123 -33538851 + AT_rich Low_complexity Low_complexity 1 15 0 6 1118 3311 61 0 5 chr15 69956130 69956557 -33538417 - L1Md_F2 LINE L1 0 6582 6158 6 1118 10594 98 45 63 chr15 69956557 69957736 -33537238 - Lx3_Mus LINE L1 -51 5835 4667 6 1118 5774 58 5 3 chr15 69957736 69958476 -33536498 + L1Md_F2 LINE L1 5839 6580 -2 6 1118 10594 98 45 63 chr15 69958476 69959089 -33535885 - Lx3_Mus LINE L1 -1220 4666 4075 6 1118 263 406 30 8 chr15 69959115 69959249 -33535725 + B1F1 SINE Alu 13 149 0 6 1118 261 354 47 17 chr15 69960511 69960710 -33534264 + MIRb SINE MIR 32 236 -26 6 1118 233 326 121 10 chr15 69961068 69961167 -33533807 - L2c LINE L2 -1 3386 3277 6 1118 1606 37 5 0 chr15 69962599 69962790 -33532184 - B2_Mm1a SINE B2 -1 192 1 6 1118 25 65 0 0 chr15 69962895 69962941 -33532033 + AT_rich Low_complexity Low_complexity 1 46 0 6 1118 6583 39 0 2 chr15 69962954 69963757 -33531217 + L1Md_F3 LINE L1 5767 6567 -17 6 1118 3034 77 0 7 chr15 69963835 69964239 -33530735 - L1_Mus1 LINE L1 -2 6565 6165 6 1118 507 33 0 0 chr15 69964261 69964322 -33530652 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 1118 238 163 41 0 chr15 69964326 69964375 -33530599 + (CAGAGA)n Simple_repeat Simple_repeat 2 52 0 6 1118 25550 65 1 1 chr15 69964955 69969019 -33525955 - L1Md_T LINE L1 0 6585 2524 6 1118 9974 64 2 1 chr15 69969018 69970685 -33524289 + L1Md_T LINE L1 801 2567 -3319 6 1118 217 294 143 8 chr15 69971741 69971866 -33523108 + MIR SINE MIR 24 175 -101 6 1118 215 354 47 7 chr15 69972644 69972792 -33522182 - MIR SINE MIR -108 154 1 6 1118 33 56 0 0 chr15 69972996 69973050 -33521924 + AT_rich Low_complexity Low_complexity 1 54 0 6 1118 245 244 110 11 chr15 69973820 69973911 -33521063 + MTD LTR MaLR 1 100 -319 6 1118 2042 194 16 0 chr15 69973961 69974348 -33520626 - ORR1B1 LTR MaLR 0 394 2 6 1118 234 311 96 48 chr15 69974785 69974910 -33520064 + MIR3 SINE MIR 25 155 -53 6 1118 884 114 7 0 chr15 69976073 69976222 -33518752 + (TCC)n Simple_repeat Simple_repeat 2 151 0 6 1118 273 395 40 0 chr15 69977605 69977757 -33517217 + MER67D LTR ERV1 154 311 -203 6 1118 453 66 0 0 chr15 69977999 69978060 -33516914 + (TAAA)n Simple_repeat Simple_repeat 2 62 0 6 1118 561 30 0 0 chr15 69979065 69979132 -33515842 + (GA)n Simple_repeat Simple_repeat 2 68 0 6 1118 33 0 0 0 chr15 69980062 69980095 -33514879 + AT_rich Low_complexity Low_complexity 1 33 0 6 1118 1632 101 0 15 chr15 69980123 69980384 -33514590 + MusHAL1 LINE L1 1688 1944 -768 6 1118 4592 155 19 9 chr15 69980378 69981239 -33513735 + L1_Mur2 LINE L1 3513 4381 -1496 6 1118 5234 63 4 9 chr15 69981293 69981970 -33513004 + L1Md_F2 LINE L1 5702 6375 -207 6 1118 2769 143 11 2 chr15 69981967 69982442 -33512532 + L1_Mur2 LINE L1 4370 4848 -1029 6 1118 260 296 126 85 chr15 69982992 69983262 -33511712 + RMER20A LTR ERVK 122 402 -114 6 1118 215 361 0 12 chr15 69983829 69983913 -33511061 + CT-rich Low_complexity Low_complexity 1 83 0 6 1118 991 318 34 54 chr15 69984464 69984847 -33510127 - Lx8 LINE L1 -554 6919 6543 6 1118 4024 43 0 63 chr15 69984847 69985066 -33509908 - L1Md_F2 LINE L1 -2 6580 6395 6 1118 1558 27 22 0 chr15 69985066 69985251 -33509723 - B2_Mm1a SINE B2 -4 189 1 6 1118 4024 43 0 63 chr15 69985251 69985570 -33509404 - L1Md_F2 LINE L1 -188 6394 6076 6 1118 991 318 34 54 chr15 69985570 69985631 -33509343 - Lx8 LINE L1 -931 6542 6484 6 1118 324 0 0 0 chr15 69985845 69985881 -33509093 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 6 1118 7686 59 9 5 chr15 69985884 69986903 -33508071 - L1Md_F2 LINE L1 -19 6563 5542 6 1118 244 323 28 75 chr15 69987401 69987508 -33507466 + B4A SINE B4 191 292 0 6 1118 22 35 0 0 chr15 69987869 69987898 -33507076 + AT_rich Low_complexity Low_complexity 1 29 0 6 1118 24 91 0 0 chr15 69988106 69988172 -33506802 + AT_rich Low_complexity Low_complexity 1 66 0 6 1118 501 198 8 8 chr15 69988379 69988501 -33506473 - L1_Mus4 LINE L1 -2 6634 6513 6 1118 1854 109 34 0 chr15 69988501 69988768 -33506206 - L1_Mus4 LINE L1 -336 6300 6025 6 1118 5448 169 6 14 chr15 69988764 69989151 -33505823 + L1_Mur2 LINE L1 4204 4590 -1287 6 1118 5337 30 0 0 chr15 69989151 69989777 -33505197 + L1Md_A LINE L1 5955 6580 -2 6 1118 5448 169 6 14 chr15 69989777 69990409 -33504565 + L1_Mur2 LINE L1 4591 5215 -662 6 1118 498 75 0 0 chr15 69990516 69990583 -33504391 + (TG)n Simple_repeat Simple_repeat 1 67 0 6 1118 544 336 49 56 chr15 69990632 69990919 -33504055 - B4A SINE B4 -6 286 2 6 1118 1014 102 0 0 chr15 69991025 69991162 -33503812 - B1_Mus1 SINE Alu -10 138 2 6 1118 276 322 28 7 chr15 69991168 69991312 -33503662 + L1MA5A LINE L1 4850 4996 -1147 6 1118 1403 58 21 5 chr15 69991416 69991605 -33503369 - B2_Mm2 SINE B2 -2 193 2 6 1118 409 294 91 62 chr15 69991754 69992348 -33502626 + L1MA5A LINE L1 5289 5899 -398 6 1119 645 139 0 0 chr15 69993066 69993174 -33501800 + (TATATG)n Simple_repeat Simple_repeat 2 109 0 6 1119 243 216 39 0 chr15 69993516 69993567 -33501407 + ID2 SINE ID 20 72 -11 6 1119 355 345 68 41 chr15 69994614 69994880 -33500094 + L1MC LINE L1 3646 3918 -2228 6 1119 1346 246 81 48 chr15 69994932 69995453 -33499521 + Lx7 LINE L1 7159 7696 0 7 1119 281 218 103 0 chr15 69995726 69995804 -33499170 - Lx5 LINE L1 0 7050 6965 7 1119 296 284 81 158 chr15 69995891 69996125 -33498849 + MER46C DNA MER2_type 2 217 -121 7 1119 38 22 0 0 chr15 69996257 69996302 -33498672 + AT_rich Low_complexity Low_complexity 1 45 0 7 1119 466 259 49 12 chr15 69996571 69996735 -33498239 + Lx8 LINE L1 5685 5888 -1585 7 1119 252 0 0 0 chr15 69997067 69997095 -33497879 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 1119 603 78 0 0 chr15 69997569 69997659 -33497315 + (TG)n Simple_repeat Simple_repeat 1 90 0 7 1119 4500 46 29 0 chr15 69997871 69998433 -33496541 - L1Md_F2 LINE L1 0 6582 6005 7 1119 8219 17 1 0 chr15 69998433 69999375 -33495599 - L1Md_A LINE L1 -1 6581 5639 7 1119 252 256 39 0 chr15 69999906 69999984 -33494990 + L1M2 LINE L1 5365 5445 -855 7 1119 219 88 0 0 chr15 70000199 70000233 -33494741 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1119 259 200 53 79 chr15 70000560 70000674 -33494300 + L1MA6 LINE L1 6183 6293 -7 2 1119 31 26 0 0 chr15 70000687 70000725 -33494249 + AT_rich Low_complexity Low_complexity 1 38 0 3 1119 212 59 29 0 chr15 70000970 70001004 -33493970 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1119 23 0 0 0 chr15 70001915 70001938 -33493036 + AT_rich Low_complexity Low_complexity 1 23 0 5 1119 1998 343 38 46 chr15 70002407 70003613 -33491361 - Lx8 LINE L1 -167 7306 6110 6 1119 1551 209 3 110 chr15 70003867 70004248 -33490726 + ORR1B1 LTR MaLR 41 380 -14 7 1119 991 245 289 13 chr15 70004267 70004659 -33490315 + Lx6 LINE L1 5846 6345 -1115 8 1119 1462 92 5 0 chr15 70004652 70004858 -33490116 + L1Md_F2 LINE L1 6342 6548 -34 9 1119 772 240 213 0 chr15 70004860 70005170 -33489804 + Lx6 LINE L1 6352 6727 -733 8 1119 477 134 0 0 chr15 70005181 70005196 -33489778 + (GA)n Simple_repeat Simple_repeat 1 15 0 1 1119 243 0 0 0 chr15 70005196 70005223 -33489751 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1119 477 134 0 0 chr15 70005223 70005289 -33489685 + (GA)n Simple_repeat Simple_repeat 2 67 0 1 1119 1386 274 59 0 chr15 70005300 70005654 -33489320 + Lx6 LINE L1 6919 7293 -167 8 1119 209 139 23 0 chr15 70005663 70005706 -33489268 + GA-rich Low_complexity Low_complexity 2 45 0 1 1119 374 297 0 79 chr15 70005732 70005871 -33489103 + Lx7 LINE L1 7179 7306 -390 1 1119 862 249 37 24 chr15 70006512 70006808 -33488166 + Charlie1a DNA MER1_type 894 1193 -262 1 1119 197 196 0 18 chr15 70006819 70006876 -33488098 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 1119 473 319 0 0 chr15 70006880 70006996 -33487978 - B3A SINE B2 -77 121 6 1 1119 228 355 37 32 chr15 70007009 70007198 -33487776 + Charlie1a DNA MER1_type 1260 1449 -6 1 1119 192 356 46 0 chr15 70007230 70007317 -33487657 - MER5B DNA MER1_type -29 149 59 1 1119 435 38 0 0 chr15 70008752 70008805 -33486169 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1119 369 0 0 0 chr15 70008805 70008845 -33486129 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1119 401 318 130 20 chr15 70008847 70009094 -33485880 - Lx8 LINE L1 -167 7306 7033 2 1119 6182 107 81 44 chr15 70009112 70009914 -33485060 - L1_Mus3 LINE L1 0 6638 5799 2 1119 1087 88 7 0 chr15 70009914 70010061 -33484913 - B1_Mus1 SINE Alu 0 148 1 2 1119 6182 117 45 64 chr15 70010061 70010447 -33484527 - L1_Mus3 LINE L1 -840 5798 5412 2 1119 449 309 24 8 chr15 70011511 70011638 -33483336 + B3 SINE B2 81 209 -7 2 1119 378 70 14 27 chr15 70012830 70012903 -33482071 + (CAAA)n Simple_repeat Simple_repeat 1 72 0 2 1119 1008 182 89 8 chr15 70014753 70015045 -33479929 + ORR1B1 LTR MaLR 6 394 0 2 1119 216 234 64 0 chr15 70015316 70015363 -33479611 + B3 SINE B2 1 50 -166 2 1119 285 265 14 13 chr15 70015444 70015552 -33479422 + ORR1E LTR MaLR 300 414 -5 2 1119 403 318 73 29 chr15 70015907 70016111 -33478863 + L1MD2 LINE L1 6146 6358 -1 2 1119 246 294 43 48 chr15 70017324 70017510 -33477464 - L1MA6 LINE L1 -1 6299 6115 3 1119 623 299 129 80 chr15 70017858 70018207 -33476767 - MTE2a LTR MaLR -13 366 1 3 1119 447 333 129 4 chr15 70018207 70018435 -33476539 - MTE2a-int LTR MaLR -8 1572 1316 3 1119 930 233 107 38 chr15 70018424 70018714 -33476260 + ORR1E-int LTR MaLR 1041 1350 -20 2 1119 722 328 48 39 chr15 70018733 70019089 -33475885 + ORR1E LTR MaLR 1 359 0 2 1119 213 228 0 0 chr15 70019501 70019580 -33475394 + (TG)n Simple_repeat Simple_repeat 2 80 0 3 1119 385 343 35 15 chr15 70019990 70020191 -33474783 + ID_B1 SINE B4 2 206 -18 3 1119 202 224 197 49 chr15 70020828 70020950 -33474024 + L2 LINE L2 1812 1951 -1468 3 1119 312 351 13 57 chr15 70021868 70022081 -33472893 - RMER4A LTR ERVK -370 215 7 3 1119 270 0 0 0 chr15 70023850 70023880 -33471094 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 3 1119 1068 70 0 27 chr15 70023881 70024027 -33470947 - B1_Mus2 SINE Alu 0 147 6 3 1119 29 60 0 0 chr15 70024053 70024103 -33470871 + AT_rich Low_complexity Low_complexity 1 50 0 3 1119 21 0 0 0 chr15 70024306 70024327 -33470647 + AT_rich Low_complexity Low_complexity 1 21 0 3 1119 820 228 95 80 chr15 70024442 70024895 -33470079 - Lx7 LINE L1 0 7696 7237 4 1119 1201 305 74 57 chr15 70026030 70026622 -33468352 + RCHARR1 DNA MER1_type 5 606 -368 4 1119 23 68 0 0 chr15 70026647 70026691 -33468283 + AT_rich Low_complexity Low_complexity 1 44 0 4 1119 453 308 12 25 chr15 70026692 70026852 -33468122 - RSINE1 SINE B4 -4 161 4 4 1119 1302 260 33 3 chr15 70026853 70027215 -33467759 + RCHARR1 DNA MER1_type 595 967 -7 4 1119 291 376 50 34 chr15 70027452 70027631 -33467343 + MLT1F2 LTR MaLR 7 188 -372 4 1119 917 121 0 0 chr15 70027687 70027827 -33467147 + L1_Mus2 LINE L1 6427 6566 0 4 1119 233 400 45 40 chr15 70027909 70028107 -33466867 + MLT1F2 LTR MaLR 344 542 -18 4 1119 569 239 92 153 chr15 70029680 70030104 -33464870 + RMER10B LTR ERVL 1 398 0 4 1119 710 206 22 62 chr15 70030352 70030579 -33464395 - RMER10A LTR ERVL -1 441 224 4 1119 679 289 59 47 chr15 70030585 70030923 -33464051 - RLTR15 LTR ERVK -17 342 1 4 1119 796 230 71 96 chr15 70030923 70031112 -33463862 - RMER10A LTR ERVL -208 234 45 4 1119 3847 166 24 7 chr15 70031112 70031814 -33463160 - Lx LINE L1 -2 6652 5939 4 1119 796 230 71 96 chr15 70031814 70031864 -33463110 - RMER10A LTR ERVL -398 44 1 4 1119 399 94 30 30 chr15 70032318 70032417 -33462557 + (TG)n Simple_repeat Simple_repeat 2 100 0 5 1119 604 206 53 43 chr15 70032471 70032679 -33462295 - L1M2 LINE L1 -847 5296 5087 5 1119 431 274 20 7 chr15 70032686 70032833 -33462141 + L1MA6 LINE L1 5873 6021 -279 5 1119 233 211 17 17 chr15 70033013 70033071 -33461903 + (TAAA)n Simple_repeat Simple_repeat 1 58 0 5 1119 600 286 38 71 chr15 70034182 70034393 -33460581 - B3 SINE B2 -12 204 1 5 1119 36 33 0 16 chr15 70034544 70034555 -33460419 + AT_rich Low_complexity Low_complexity 1 11 0 5 1119 408 289 18 30 chr15 70034555 70034719 -33460255 + RSINE1 SINE B4 2 163 -2 5 1119 36 33 0 16 chr15 70034719 70034768 -33460206 + AT_rich Low_complexity Low_complexity 1 49 0 5 1119 18825 77 4 2 chr15 70035288 70037493 -33457481 + L1Md_F2 LINE L1 3029 5234 -649 5 1119 261 0 0 0 chr15 70037493 70037522 -33457452 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 1119 18825 77 4 2 chr15 70037522 70037573 -33457401 + L1Md_F2 LINE L1 5235 5292 -591 5 1119 4078 37 0 2 chr15 70037573 70038059 -33456915 + L1Md_A LINE L1 6097 6581 -1 6 1119 18825 77 4 2 chr15 70038059 70038353 -33456621 + L1Md_F2 LINE L1 5293 5583 -300 5 1119 7771 55 14 3 chr15 70038353 70039413 -33455561 + L1Md_F2 LINE L1 5587 6582 0 5 1119 927 188 11 11 chr15 70039834 70040012 -33454962 - URR1A DNA MER1_type 0 226 49 6 1119 490 274 49 49 chr15 70039835 70040058 -33454916 + CYRA11_Mm Unknown Y-chromosome 172 394 -223 6 1119 227 103 26 0 chr15 70040156 70040195 -33454779 + Lx8 LINE L1 7412 7451 -22 6 1119 519 60 0 0 chr15 70040248 70040315 -33454659 + (TA)n Simple_repeat Simple_repeat 1 67 0 6 1119 243 0 0 0 chr15 70042139 70042166 -33452808 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1119 211 287 138 42 chr15 70042274 70042463 -33452511 + MIRc SINE MIR 34 240 -28 6 1119 862 71 16 0 chr15 70043145 70043272 -33451702 + (TC)n Simple_repeat Simple_repeat 2 130 0 6 1119 425 211 0 11 chr15 70044151 70044242 -33450732 - ORR1B1 LTR MaLR -304 90 1 6 1119 183 306 48 0 chr15 70046085 70046147 -33448827 + L3 LINE CR1 92 156 -4333 6 1119 196 355 73 16 chr15 70046180 70046303 -33448671 - MIRc SINE MIR -30 238 109 7 1119 763 53 9 9 chr15 70047421 70047535 -33447439 + (GA)n Simple_repeat Simple_repeat 2 115 0 7 1119 2049 203 68 8 chr15 70047567 70048063 -33446911 - RLTR11A2 LTR ERVK 0 527 2 7 1119 222 37 0 0 chr15 70048243 70048270 -33446704 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1119 3417 96 34 12 chr15 70048427 70048921 -33446053 + L1_Mus2 LINE L1 6062 6566 0 7 1119 633 323 83 32 chr15 70050575 70051007 -33443967 - RMER5 LTR ERV1 -5 529 76 7 1119 673 335 59 56 chr15 70051962 70052287 -33442687 - MTEb LTR MaLR 0 379 56 7 1119 366 23 0 0 chr15 70052287 70052330 -33442644 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 1119 673 335 59 56 chr15 70052330 70052377 -33442597 - MTEb LTR MaLR -324 55 6 7 1119 246 50 0 0 chr15 70052522 70052562 -33442412 - L1_Mus4 LINE L1 -4 6632 6593 7 1119 2177 77 10 0 chr15 70052562 70052861 -33442113 + MTA_Mm LTR MaLR 1 302 -94 7 1119 4582 111 6 1 chr15 70052861 70053804 -33441170 - L1_Mus4 LINE L1 -417 6219 5274 7 1119 4131 124 43 13 chr15 70053887 70054566 -33440408 - Lx3_Mus LINE L1 -11 6998 6300 8 1119 535 43 0 0 chr15 70054566 70054635 -33440339 + L1_Mur1 LINE L1 5202 5270 -616 8 1119 1235 57 0 0 chr15 70054632 70054791 -33440183 - L1Md_F2 LINE L1 -597 5987 5829 8 1119 4266 52 2 33 chr15 70054791 70055364 -33439610 + L1Md_F2 LINE L1 6024 6578 -4 8 1119 234 174 0 0 chr15 70055418 70055464 -33439510 + A-rich Low_complexity Low_complexity 1 46 0 8 1119 3367 109 2 0 chr15 70055465 70055944 -33439030 + L1_Mur1 LINE L1 5255 5734 -152 8 1119 1630 217 101 23 chr15 70056085 70056561 -33438413 + Lx9 LINE L1 7132 7644 0 8 1119 598 0 31 42 chr15 70057405 70057501 -33437473 + (TTTTG)n Simple_repeat Simple_repeat 2 96 0 8 1119 239 159 23 0 chr15 70058457 70058501 -33436473 + (CATATA)n Simple_repeat Simple_repeat 6 50 0 8 1119 504 207 0 0 chr15 70058501 70058622 -33436352 + (TG)n Simple_repeat Simple_repeat 2 122 0 8 1119 331 219 12 24 chr15 70058623 70058707 -33436267 - HAL1-3A_ME LINE L1 -831 2027 1945 8 1119 514 363 55 28 chr15 70059265 70059335 -33435639 + Lx8 LINE L1 6097 6164 -1309 8 1119 1361 233 53 17 chr15 70059335 70059693 -33435281 + ORR1D1 LTR MaLR 1 371 -3 9 1119 514 363 55 28 chr15 70059693 70060055 -33434919 + Lx8 LINE L1 6165 6541 -932 8 1119 528 16 0 0 chr15 70060799 70060860 -33434114 + (TA)n Simple_repeat Simple_repeat 1 61 0 9 1119 294 342 54 9 chr15 70062663 70062775 -33432199 + ID_B1 SINE B4 89 205 -19 9 1119 435 328 35 1 chr15 70063161 70063308 -33431666 + ID_B1 SINE B4 66 224 -68 9 1119 209 139 23 0 chr15 70063308 70063351 -33431623 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 9 1119 671 317 8 30 chr15 70063780 70064014 -33430960 + Lx7 LINE L1 6526 6754 -942 9 1119 232 333 57 16 chr15 70064029 70064151 -33430823 - RMER12 LTR ERVK -471 851 725 9 1119 404 214 29 0 chr15 70064153 70064256 -33430718 + Lx9 LINE L1 7538 7643 -1 9 1119 756 327 82 41 chr15 70064264 70064900 -33430074 + Lx8 LINE L1 6741 7443 -30 9 1119 814 272 75 80 chr15 70064932 70065300 -33429674 - MTE2a LTR MaLR -46 373 5 9 1119 300 342 43 49 chr15 70065883 70066046 -33428928 - MIR SINE MIR -46 216 55 1 1119 227 94 62 15 chr15 70068394 70068459 -33426515 + A-rich Low_complexity Low_complexity 1 68 0 1 1119 612 0 0 0 chr15 70068720 70068788 -33426186 + (TC)n Simple_repeat Simple_repeat 2 69 0 1 1119 243 0 0 0 chr15 70068788 70068814 -33426160 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1119 6575 116 41 5 chr15 70068915 70070254 -33424720 - L1_Mus3 LINE L1 -1 6637 5262 1 1119 685 272 15 77 chr15 70070352 70070611 -33424363 - MT2A LTR ERVL 0 533 291 1 1119 567 201 0 0 chr15 70070619 70070753 -33424221 + GA-rich Low_complexity Low_complexity 3 136 0 1 1119 489 304 5 114 chr15 70070755 70070948 -33424026 - MT2A LTR ERVL -313 220 49 1 1119 3299 58 0 0 chr15 70070972 70071383 -33423591 - L1Md_F2 LINE L1 -12 6570 6160 1 1119 234 216 20 0 chr15 70071383 70071434 -33423540 - MT2A LTR ERVL -481 52 1 1 1119 205 277 32 11 chr15 70072715 70072810 -33422164 + GA-rich Low_complexity Low_complexity 4 100 0 1 1119 534 308 12 36 chr15 70072843 70073008 -33421966 + RSINE1 SINE B4 5 165 0 1 1119 397 227 11 22 chr15 70073176 70073266 -33421708 + B3 SINE B2 1 89 -127 1 1119 26 50 0 0 chr15 70075309 70075349 -33419625 + AT_rich Low_complexity Low_complexity 1 40 0 1 1119 233 221 60 50 chr15 70075570 70075670 -33419304 - Lx9 LINE L1 0 7644 7544 1 1119 1236 214 113 16 chr15 70075683 70075992 -33418982 - Lx9 LINE L1 -171 7473 7135 1 1119 371 223 10 50 chr15 70075994 70076093 -33418881 + Lx9 LINE L1 7017 7111 -533 1 1119 11216 23 0 0 chr15 70076219 70077530 -33417444 + L1Md_T LINE L1 4276 5586 -297 1 1119 8981 6 0 0 chr15 70077530 70078526 -33416448 + L1Md_T LINE L1 5587 6582 0 1 1119 28 0 0 0 chr15 70078921 70078949 -33416025 + AT_rich Low_complexity Low_complexity 1 28 0 1 1119 24 53 0 0 chr15 70079743 70079781 -33415193 + AT_rich Low_complexity Low_complexity 1 38 0 1 1119 23 33 0 0 chr15 70080106 70080136 -33414838 + AT_rich Low_complexity Low_complexity 1 30 0 1 1119 191 379 31 10 chr15 70081416 70081512 -33413462 - L2a LINE L2 -1 3425 3328 1 1119 359 299 218 60 chr15 70081650 70081902 -33413072 - B4A SINE B4 0 292 1 1 1119 221 310 99 10 chr15 70081969 70082070 -33412904 - PB1D7 SINE Alu -6 114 5 1 1119 7131 133 39 2 chr15 70082185 70083500 -33411474 + Lx3C LINE L1 5408 6768 -208 1 1119 4145 153 41 0 chr15 70083502 70084206 -33410768 + Lx2 LINE L1 6264 6996 -1 1 1119 2611 144 2 18 chr15 70084305 70084750 -33410224 - BGLII_B LTR ERVK 0 441 4 1 1119 215 274 0 73 chr15 70085255 70085310 -33409664 + B3A SINE B2 5 55 -143 1 1119 432 343 112 86 chr15 70085286 70085634 -33409340 - ORR1D2 LTR MaLR -13 357 1 1 1119 558 333 101 19 chr15 70085599 70085856 -33409118 + B4A SINE B4 1 278 -14 1 1119 384 22 0 0 chr15 70085879 70085924 -33409050 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1119 24 0 0 0 chr15 70086146 70086170 -33408804 + AT_rich Low_complexity Low_complexity 1 24 0 1 1119 238 47 45 23 chr15 70087249 70087293 -33407681 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 1 1119 537 229 140 108 chr15 70087812 70087963 -33407011 + B3A SINE B2 2 159 -36 1 1119 471 100 0 0 chr15 70087963 70088033 -33406941 + (CA)n Simple_repeat Simple_repeat 1 70 0 1 1119 333 229 140 108 chr15 70088033 70088067 -33406907 + B2_Mm2 SINE B2 160 193 -2 1 1119 211 309 107 0 chr15 70088168 70088252 -33406722 - MIRb SINE MIR -100 168 76 1 1119 381 93 0 0 chr15 70088894 70088948 -33406026 + (GGA)n Simple_repeat Simple_repeat 2 55 0 1 1119 393 58 0 0 chr15 70089518 70089570 -33405404 + (TATG)n Simple_repeat Simple_repeat 1 52 0 1 1119 1142 82 0 0 chr15 70090108 70090255 -33404719 + B1_Mus2 SINE Alu 1 147 0 1 1119 3192 164 59 21 chr15 70090285 70090897 -33404077 + Lx2B LINE L1 6364 6998 -2 1 1119 764 292 0 19 chr15 70090908 70091114 -33403860 + B3 SINE B2 1 202 -14 1 1119 1216 79 11 0 chr15 70091174 70091352 -33403622 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 1 1119 763 161 28 0 chr15 70092041 70092184 -33402790 - URR1A DNA MER1_type 0 226 80 1 1119 213 335 98 18 chr15 70092592 70092756 -33402218 + MIRb SINE MIR 33 209 -59 1 1119 540 338 32 23 chr15 70093935 70094153 -33400821 + MTD LTR MaLR 1 220 -199 1 1119 498 285 35 114 chr15 70094150 70094352 -33400622 + B3A SINE B2 13 198 0 1 1119 189 0 0 0 chr15 70094434 70094455 -33400519 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1119 234 358 63 24 chr15 70094516 70094642 -33400332 + MTD LTR MaLR 275 405 -14 1 1119 2002 141 80 21 chr15 70094941 70095193 -33399781 + Lx LINE L1 6256 6518 -136 1 1119 183 42 0 0 chr15 70095193 70095217 -33399757 + (TGGG)n Simple_repeat Simple_repeat 2 25 0 1 1119 2002 141 80 21 chr15 70095217 70095341 -33399633 + Lx LINE L1 6519 6653 -1 1 1119 963 212 0 0 chr15 70095569 70095583 -33399391 - L1_Mm LINE L1 -689 5194 5181 1 1119 369 0 0 0 chr15 70095583 70095624 -33399350 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1119 963 212 0 0 chr15 70095624 70095798 -33399176 - L1_Mm LINE L1 -703 5180 5007 1 1119 342 187 0 0 chr15 70097003 70097094 -33397880 + (TGGA)n Simple_repeat Simple_repeat 3 93 0 1 1119 359 39 39 0 chr15 70097119 70097171 -33397803 + (CAGA)n Simple_repeat Simple_repeat 3 56 0 1 1119 207 69 0 0 chr15 70097494 70097523 -33397451 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1119 479 17 0 16 chr15 70097523 70097583 -33397391 + (GA)n Simple_repeat Simple_repeat 2 61 0 1 1119 533 335 46 54 chr15 70097584 70097824 -33397150 - MLT2B2 LTR ERVL -277 238 1 1 1119 941 248 27 104 chr15 70098542 70098907 -33396067 + Lx9 LINE L1 7181 7517 -127 1 1119 213 250 0 0 chr15 70098908 70098968 -33396006 + (CATATA)n Simple_repeat Simple_repeat 2 61 0 1 1119 519 211 23 6 chr15 70098968 70099140 -33395834 + Lx9 LINE L1 7459 7633 -11 1 1119 16262 103 30 1 chr15 70099592 70102707 -33392267 - L1_Mus1 LINE L1 -19 6548 3331 1 1119 1340 155 19 0 chr15 70102703 70102909 -33392065 - L1VL1 LINE L1 -6212 210 1 1 1119 365 308 39 0 chr15 70102951 70103055 -33391919 + PB1D10 SINE Alu 1 108 -9 1 1119 194 387 11 11 chr15 70103327 70103421 -33391553 + MIRb SINE MIR 81 174 -94 1 1119 301 341 89 75 chr15 70103839 70104454 -33390520 + L1M5 LINE L1 4359 4982 -1164 1 1119 261 0 0 0 chr15 70104554 70104583 -33390391 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1119 2197 219 45 22 chr15 70104916 70105424 -33389550 + RMER5 LTR ERV1 13 532 -2 1 1119 3858 75 0 25 chr15 70106169 70106700 -33388274 + L1_Mus1 LINE L1 6049 6566 -1 1 1119 30 0 0 0 chr15 70106700 70106730 -33388244 + AT_rich Low_complexity Low_complexity 1 30 0 1 1119 246 143 0 0 chr15 70106892 70106941 -33388033 + (TTA)n Simple_repeat Simple_repeat 3 51 0 1 1119 637 337 43 7 chr15 70107766 70108044 -33386930 + MER63D DNA AcHobo 336 623 -438 1 1119 663 104 0 0 chr15 70108181 70108287 -33386687 + (TC)n Simple_repeat Simple_repeat 1 106 0 1 1119 611 366 58 72 chr15 70108365 70108727 -33386247 + ORR1E LTR MaLR 1 357 -2 1 1119 264 265 12 24 chr15 70108739 70108824 -33386150 - MTEb LTR MaLR -18 361 278 1 1119 235 376 33 62 chr15 70108897 70109107 -33385867 - MTEb LTR MaLR -153 206 3 1 1119 989 219 12 93 chr15 70109743 70110045 -33384929 - L1MA7 LINE L1 -364 5927 5610 1 1119 1399 263 111 24 chr15 70111940 70112399 -33382575 + RMER5 LTR ERV1 2 500 -34 1 1119 1318 263 70 5 chr15 70112402 70112773 -33382201 + Lx7 LINE L1 6907 7301 -395 1 1119 612 152 0 27 chr15 70112868 70113017 -33381957 - RMER17B LTR ERVK -495 463 319 1 1119 288 102 0 0 chr15 70113023 70113072 -33381902 + (T)n Simple_repeat Simple_repeat 1 49 0 1 1119 609 14 0 0 chr15 70113606 70113676 -33381298 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 1119 305 299 26 61 chr15 70113726 70113840 -33381134 - RSINE1 SINE B4 0 165 56 1 1119 1008 275 114 87 chr15 70113865 70114383 -33380591 - MT2A LTR ERVL 0 533 2 1 1119 316 195 106 0 chr15 70114413 70114526 -33380448 + Lx9 LINE L1 7393 7517 -127 1 1119 234 0 0 0 chr15 70114526 70114552 -33380422 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1119 459 0 0 0 chr15 70114551 70114602 -33380372 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 1119 228 189 0 36 chr15 70114654 70114709 -33380265 + GA-rich Low_complexity Low_complexity 4 56 0 1 1119 393 321 80 35 chr15 70116876 70117037 -33377937 + MLT1D LTR MaLR 1 167 -338 1 1119 567 43 0 0 chr15 70117037 70117107 -33377867 + (TC)n Simple_repeat Simple_repeat 2 71 0 1 1119 393 321 80 35 chr15 70117107 70117171 -33377803 + MLT1D LTR MaLR 168 235 -270 1 1119 484 191 51 56 chr15 70117113 70117291 -33377683 - RMER17C LTR ERVK -135 275 99 1 1119 373 360 50 69 chr15 70117491 70117709 -33377265 + B3A SINE B2 2 215 -1 1 1119 469 296 29 22 chr15 70117795 70117933 -33377041 + B1F SINE Alu 5 143 -6 1 1119 321 345 0 9 chr15 70117937 70118051 -33376923 + GA-rich Low_complexity Low_complexity 3 115 0 1 1119 183 328 66 0 chr15 70118771 70118832 -33376142 - MIRm SINE MIR -1 275 211 1 1119 532 310 43 44 chr15 70119179 70119554 -33375420 + Lx8 LINE L1 5447 5847 -342 1 1119 1780 304 55 19 chr15 70120802 70121422 -33373552 + Lx8 LINE L1 6279 6920 -553 1 1119 235 239 22 51 chr15 70121455 70121592 -33373382 + (TTATA)n Simple_repeat Simple_repeat 2 134 0 1 1119 466 274 15 46 chr15 70121592 70121722 -33373252 - Lx8 LINE L1 -883 6590 6465 1 1119 391 163 40 13 chr15 70121727 70121876 -33373098 + (TA)n Simple_repeat Simple_repeat 1 153 0 1 1119 321 354 30 30 chr15 70121926 70122092 -33372882 + Lx8 LINE L1 7167 7332 -141 1 1119 390 17 100 0 chr15 70122222 70122282 -33372692 + L1Md_F3 LINE L1 6519 6584 0 1 1119 255 337 22 0 chr15 70122329 70122418 -33372556 + RMER12 LTR ERVK 750 840 -482 1 1119 486 83 0 0 chr15 70122447 70122519 -33372455 + (TA)n Simple_repeat Simple_repeat 2 73 0 1 1120 280 290 30 61 chr15 70124328 70124460 -33370514 + ID_B1 SINE B4 92 219 -5 1 1120 447 19 0 0 chr15 70125212 70125264 -33369710 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 1 1120 237 279 0 44 chr15 70125270 70125360 -33369614 + (TATG)n Simple_repeat Simple_repeat 3 88 0 1 1120 702 257 31 110 chr15 70126297 70126524 -33368450 - B3 SINE B2 0 216 8 1 1120 716 316 66 63 chr15 70127106 70127777 -33367197 + RLTR6-int LTR ERV1 2096 2768 -4838 1 1120 352 327 32 33 chr15 70127814 70128061 -33366913 + RLTR6-int LTR ERV1 4269 4576 -3202 1 1120 1195 316 59 25 chr15 70128403 70129200 -33365774 + RLTR6-int LTR ERV1 4737 5552 -2004 1 1120 37791 14 2 7 chr15 70129623 70134827 -33360147 + L1Md_A LINE L1 416 5586 -297 2 1120 8637 23 0 0 chr15 70134827 70135823 -33359151 + L1Md_A LINE L1 5587 6582 0 2 1120 492 18 0 0 chr15 70136023 70136080 -33358894 + (GA)n Simple_repeat Simple_repeat 1 57 0 2 1120 1916 150 84 22 chr15 70136315 70136731 -33358243 + RLTR47_MM LTR ERV1 91 532 0 2 1120 417 241 0 0 chr15 70136840 70136915 -33358059 - B3 SINE B2 -5 211 137 2 1120 266 134 200 89 chr15 70136915 70137005 -33357969 + RLTR23 LTR ERV1 1 100 -330 2 1120 25 0 0 0 chr15 70137072 70137097 -33357877 + AT_rich Low_complexity Low_complexity 1 25 0 2 1120 366 278 62 55 chr15 70137105 70137394 -33357580 - Lx9 LINE L1 -15 7629 7339 2 1120 536 348 53 19 chr15 70137523 70137731 -33357243 - B3A SINE B2 0 216 2 2 1120 327 297 41 25 chr15 70137770 70137891 -33357083 - B1F SINE Alu 0 149 27 2 1120 34 42 0 0 chr15 70139641 70139689 -33355285 + AT_rich Low_complexity Low_complexity 1 48 0 2 1120 495 60 0 0 chr15 70139704 70139771 -33355203 + (GA)n Simple_repeat Simple_repeat 2 68 0 2 1120 219 300 0 0 chr15 70139904 70139984 -33354990 + T-rich Low_complexity Low_complexity 1 80 0 2 1120 22 35 0 0 chr15 70140043 70140072 -33354902 + AT_rich Low_complexity Low_complexity 1 29 0 2 1120 2998 328 42 19 chr15 70140074 70141251 -33353723 + Lx7 LINE L1 6132 7335 -361 2 1120 218 154 0 37 chr15 70141270 70141324 -33353650 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 2 1120 300 111 0 0 chr15 70141388 70141442 -33353532 + (GA)n Simple_repeat Simple_repeat 2 55 0 2 1120 879 122 0 35 chr15 70141479 70141623 -33353351 - B1_Mus1 SINE Alu -8 140 2 2 1120 645 319 53 57 chr15 70141969 70142215 -33352759 - B4A SINE B4 -6 286 42 2 1120 378 0 0 0 chr15 70142549 70142591 -33352383 + (TTA)n Simple_repeat Simple_repeat 2 43 0 2 1120 1649 234 16 0 chr15 70144288 70144664 -33350310 - RLTR14 LTR ERV1 0 382 1 2 1120 673 340 54 24 chr15 70144729 70145024 -33349950 + ORR1D2 LTR MaLR 1 304 -66 2 1120 261 98 0 0 chr15 70145024 70145065 -33349909 + (A)n Simple_repeat Simple_repeat 1 41 0 2 1120 368 171 14 0 chr15 70145065 70145135 -33349839 + ORR1D2 LTR MaLR 298 368 -2 2 1120 288 70 0 0 chr15 70146247 70146290 -33348684 + (TAAAA)n Simple_repeat Simple_repeat 2 44 0 2 1120 462 329 116 58 chr15 70146306 70146548 -33348426 + B4A SINE B4 37 292 0 2 1120 471 18 0 0 chr15 70146880 70146936 -33348038 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 1120 1168 68 0 0 chr15 70148282 70148429 -33346545 - B1_Mus1 SINE Alu 0 148 2 2 1120 280 209 99 26 chr15 70148438 70148590 -33346384 - Lx9 LINE L1 -4 7640 7478 2 1120 282 276 8 23 chr15 70148598 70148635 -33346339 - Lx9 LINE L1 -134 7510 7473 2 1120 279 0 0 0 chr15 70148635 70148666 -33346308 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1120 282 276 8 23 chr15 70148666 70148758 -33346216 - Lx9 LINE L1 -172 7472 7384 2 1120 562 286 1 14 chr15 70148859 70149007 -33345967 + Lx9 LINE L1 6941 7219 -425 2 1120 553 234 18 0 chr15 70149141 70149252 -33345722 - B3 SINE B2 -4 212 100 2 1120 4887 147 25 0 chr15 70149339 70150143 -33344831 - Lx LINE L1 -2 6652 5829 2 1120 222 196 20 0 chr15 70150147 70150198 -33344776 - B3A SINE B2 -146 52 1 2 1120 713 339 52 33 chr15 70152135 70152711 -33342263 - L1MB1 LINE L1 -88 6080 5484 2 1120 1124 164 15 0 chr15 70152720 70152921 -33342053 - Lx3_Mus LINE L1 -12 6997 6794 2 1120 13115 96 12 7 chr15 70152922 70154897 -33340077 - L1_Mur1 LINE L1 -1634 4252 2268 2 1120 3265 179 61 31 chr15 70154899 70156267 -33338707 - L1_Mur1 LINE L1 -4222 1664 5 2 1120 228 240 155 31 chr15 70156291 70156420 -33338554 - L1M2 LINE L1 -838 5474 5330 2 1120 333 0 0 0 chr15 70156737 70156774 -33338200 + (TC)n Simple_repeat Simple_repeat 2 38 0 2 1120 333 0 0 0 chr15 70156774 70156810 -33338164 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1120 231 36 0 0 chr15 70156894 70156922 -33338052 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 1120 291 28 0 0 chr15 70157002 70157038 -33337936 + (TCTG)n Simple_repeat Simple_repeat 3 38 0 2 1120 417 319 21 14 chr15 70157071 70157098 -33337876 - RSINE1 SINE B4 -2 163 136 2 1120 213 39 0 0 chr15 70157098 70157124 -33337850 + (TGG)n Simple_repeat Simple_repeat 1 26 0 2 1120 417 319 21 14 chr15 70157124 70157236 -33337738 - RSINE1 SINE B4 -30 135 23 2 1120 234 0 0 0 chr15 70157236 70157262 -33337712 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1120 560 372 53 4 chr15 70157263 70157490 -33337484 - B4A SINE B4 -51 241 4 2 1120 530 317 14 14 chr15 70157855 70158002 -33336972 + B3A SINE B2 5 151 -47 2 1120 1252 193 9 0 chr15 70159080 70159303 -33335671 + URR1B DNA MER1_type 1 225 0 2 1120 529 361 53 11 chr15 70160012 70160370 -33334604 - Lx9 LINE L1 -731 6913 6541 2 1120 546 29 0 0 chr15 70160382 70160450 -33334524 + (CA)n Simple_repeat Simple_repeat 1 68 0 2 1120 356 147 0 13 chr15 70160450 70160526 -33334448 + (TA)n Simple_repeat Simple_repeat 2 76 0 2 1120 546 342 5 10 chr15 70160534 70160729 -33334245 - Lx9 LINE L1 -1118 6526 6333 2 1120 37817 30 2 0 chr15 70162485 70168930 -33326044 - L1Md_T LINE L1 0 6585 60 2 1120 510 294 18 6 chr15 70169194 70169358 -33325616 - Lx9 LINE L1 -800 6844 6679 2 1120 606 232 218 13 chr15 70169405 70169717 -33325257 + Lx9 LINE L1 7268 7643 -1 2 1120 319 360 112 51 chr15 70169751 70169947 -33325027 + MLT1A0 LTR MaLR 152 359 -6 2 1120 180 375 35 9 chr15 70170375 70170488 -33324486 + L2a LINE L2 3035 3150 -276 2 1120 301 341 7 110 chr15 70170699 70170854 -33324120 + MLT1A0 LTR MaLR 9 147 -218 2 1120 261 235 0 0 chr15 70170861 70170912 -33324062 - Lx9 LINE L1 -805 6839 6789 2 1120 210 318 14 57 chr15 70171307 70171377 -33323597 + ID4 SINE ID 4 70 -13 2 1120 279 54 0 0 chr15 70171417 70171454 -33323520 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1120 441 0 0 0 chr15 70171454 70171502 -33323472 + (GA)n Simple_repeat Simple_repeat 2 50 0 2 1120 1269 274 40 51 chr15 70172509 70172859 -33322115 + ORR1E LTR MaLR 9 354 -5 2 1120 25 51 0 0 chr15 70172914 70172953 -33322021 + AT_rich Low_complexity Low_complexity 1 39 0 2 1120 204 263 0 0 chr15 70174173 70174230 -33320744 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1120 504 45 0 0 chr15 70174272 70174339 -33320635 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1120 922 285 65 40 chr15 70174390 70174894 -33320080 - L1ME3A LINE L1 -146 6027 5511 2 1120 22 35 0 0 chr15 70176781 70176810 -33318164 + AT_rich Low_complexity Low_complexity 1 29 0 2 1120 550 262 82 5 chr15 70176810 70176994 -33317980 - B3A SINE B2 0 198 1 2 1120 639 119 0 0 chr15 70177244 70177370 -33317604 + (TC)n Simple_repeat Simple_repeat 1 126 0 2 1120 360 43 0 0 chr15 70177370 70177416 -33317558 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1120 23 0 0 0 chr15 70178084 70178107 -33316867 + AT_rich Low_complexity Low_complexity 1 23 0 2 1120 1891 202 78 14 chr15 70178138 70178584 -33316390 - Lx3C LINE L1 -675 6301 5827 2 1120 2959 195 54 13 chr15 70178575 70179184 -33315790 + Lx3C LINE L1 6343 6976 0 2 1120 307 348 20 41 chr15 70179216 70179363 -33315611 - B3A SINE B2 -5 193 50 2 1120 238 289 17 42 chr15 70179584 70179703 -33315271 + (TATG)n Simple_repeat Simple_repeat 2 117 0 2 1120 3344 56 2 5 chr15 70179713 70180145 -33314829 - L1Md_F2 LINE L1 -2 6580 6150 2 1120 306 0 0 0 chr15 70180424 70180458 -33314516 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1120 914 63 8 8 chr15 70180458 70180585 -33314389 - B1_Mus2 SINE Alu -10 137 11 2 1120 471 155 0 0 chr15 70181518 70181621 -33313353 + (TA)n Simple_repeat Simple_repeat 2 104 0 2 1120 1181 135 0 0 chr15 70181624 70181809 -33313165 - L1_Mus1 LINE L1 -3 6564 6380 2 1120 5326 64 40 0 chr15 70181809 70182725 -33312249 + L1_Mus1 LINE L1 5368 6320 -247 2 1120 339 339 21 84 chr15 70182725 70182867 -33312107 + MT2B LTR ERVL 125 257 -344 2 1120 655 263 0 15 chr15 70182767 70182902 -33312072 + B1_Mur2 SINE Alu 6 138 -11 2 1120 239 325 108 87 chr15 70183566 70183751 -33311223 + ORR1E LTR MaLR 100 288 -71 2 1120 393 296 6 26 chr15 70183858 70184014 -33310960 - L1M3 LINE L1 -645 5646 5494 2 1120 321 303 71 19 chr15 70184171 70184326 -33310648 - RSINE1 SINE B4 0 165 3 2 1120 236 327 45 27 chr15 70184489 70184599 -33310375 + MLT1A1 LTR MaLR 294 405 -3 2 1120 366 261 48 22 chr15 70184620 70184834 -33310140 - L1M3 LINE L1 -872 5440 5215 2 1120 517 304 116 52 chr15 70185332 70185770 -33309204 - MER67C LTR ERV1 -237 474 9 2 1120 595 71 10 10 chr15 70185970 70186069 -33308905 + (TCTA)n Simple_repeat Simple_repeat 3 101 0 2 1120 234 318 31 16 chr15 70187789 70187853 -33307121 - ID4 SINE ID -17 66 2 2 1120 561 51 0 13 chr15 70187858 70187937 -33307037 + L1_Mus2 LINE L1 6489 6566 0 2 1120 1368 244 58 11 chr15 70187948 70188286 -33306688 - MTD LTR MaLR 0 419 19 2 1120 202 132 26 0 chr15 70188286 70188324 -33306650 + A-rich Low_complexity Low_complexity 3 41 0 2 1120 340 244 76 60 chr15 70190123 70190317 -33304657 - Lx4B LINE L1 -8 7050 6721 2 1120 184 333 12 58 chr15 70191686 70191772 -33303202 + L2c LINE L2 3306 3387 0 2 1120 857 100 8 0 chr15 70191939 70192069 -33302905 + (GGGAGA)n Simple_repeat Simple_repeat 3 133 0 2 1120 501 17 0 0 chr15 70192916 70192974 -33302000 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 1120 405 86 0 0 chr15 70193417 70193475 -33301499 + (TA)n Simple_repeat Simple_repeat 2 59 0 2 1120 303 49 0 0 chr15 70193475 70193515 -33301459 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1120 22 35 0 0 chr15 70193733 70193762 -33301212 + AT_rich Low_complexity Low_complexity 1 29 0 2 1120 6524 61 1 4 chr15 70193883 70194720 -33300254 + L1Md_F2 LINE L1 5748 6582 0 2 1120 4732 84 38 14 chr15 70195398 70196087 -33298887 + L1Md_F2 LINE L1 5878 6582 0 2 1120 439 289 52 67 chr15 70196824 70197091 -33297883 + MER45B DNA Tip100 615 877 -163 2 1120 1279 111 14 5 chr15 70198127 70198335 -33296639 - L1_Mus3 LINE L1 -2 6636 6427 2 1120 218 214 0 67 chr15 70200169 70200229 -33294745 + GA-rich Low_complexity Low_complexity 6 61 0 3 1120 224 0 0 61 chr15 70201224 70201257 -33293717 + (CAAAAA)n Simple_repeat Simple_repeat 4 34 0 3 1120 2367 114 18 86 chr15 70201328 70201781 -33293193 - BGLII_Mus LTR ERVK 0 422 1 3 1120 3262 3 0 0 chr15 70202203 70202567 -33292407 + L1Md_A LINE L1 6219 6582 0 3 1120 2773 95 20 3 chr15 70202593 70202983 -33291991 - L1_Mus3 LINE L1 -175 6463 6067 3 1120 889 83 48 7 chr15 70202983 70203129 -33291845 + L1_Mus3 LINE L1 6472 6623 -15 3 1120 1087 112 6 11 chr15 70203133 70203313 -33291661 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 3 1120 560 285 40 92 chr15 70203786 70204014 -33290960 + B3A SINE B2 1 216 0 3 1120 450 306 95 32 chr15 70207285 70207474 -33287500 + B3 SINE B2 1 201 -15 3 1120 212 0 0 35 chr15 70207756 70207785 -33287189 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 3 1120 4161 150 65 7 chr15 70207792 70208545 -33286429 - Lx2 LINE L1 -6 6991 6195 3 1120 363 319 9 18 chr15 70208948 70209061 -33285913 - B1F2 SINE Alu -22 127 16 3 1120 227 239 0 0 chr15 70209060 70209106 -33285868 + MLT2D LTR ERVL 122 167 -247 3 1120 551 279 22 7 chr15 70209813 70209950 -33285024 + B1_Mur2 SINE Alu 10 148 -1 3 1120 360 0 0 0 chr15 70210360 70210400 -33284574 + (T)n Simple_repeat Simple_repeat 1 40 0 3 1120 1128 88 0 0 chr15 70210400 70210547 -33284427 - B1_Mus2 SINE Alu 0 147 1 3 1120 207 0 0 0 chr15 70210571 70210594 -33284380 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 1120 263 225 0 30 chr15 70211911 70212052 -33282922 + CT-rich Low_complexity Low_complexity 1 136 0 3 1120 22 56 0 0 chr15 70212145 70212181 -33282793 + AT_rich Low_complexity Low_complexity 1 36 0 3 1120 417 70 0 0 chr15 70212375 70212432 -33282542 + (CATA)n Simple_repeat Simple_repeat 4 60 0 3 1120 551 286 0 0 chr15 70212634 70212767 -33282207 - RSINE1 SINE B4 -22 143 11 3 1120 221 200 156 26 chr15 70214361 70214438 -33280536 + MIR SINE MIR 96 182 -80 3 1120 342 0 0 0 chr15 70215875 70215913 -33279061 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1120 299 394 63 0 chr15 70216037 70216179 -33278795 + RSINE1 SINE B4 3 153 -12 3 1120 486 0 0 0 chr15 70217997 70218051 -33276923 + (GA)n Simple_repeat Simple_repeat 2 55 0 3 1120 1300 318 28 15 chr15 70219829 70220292 -33274682 + Lx7 LINE L1 6839 7307 -389 3 1120 1120 101 6 6 chr15 70220298 70220477 -33274497 + (TTTTC)n Simple_repeat Simple_repeat 2 180 0 3 1120 637 129 0 33 chr15 70220509 70220629 -33274345 - L1Md_F2 LINE L1 -3 6579 6464 3 1120 668 43 11 0 chr15 70220648 70220740 -33274234 + (CTTTG)n Simple_repeat Simple_repeat 2 94 0 3 1120 204 40 0 0 chr15 70220740 70220765 -33274209 + (TTCTC)n Simple_repeat Simple_repeat 4 28 0 3 1120 257 211 53 47 chr15 70220765 70220834 -33274140 + T-rich Low_complexity Low_complexity 103 173 0 3 1120 1048 188 9 0 chr15 70220834 70221047 -33273927 - Lx2 LINE L1 -2 6995 6781 3 1120 257 211 53 47 chr15 70221047 70221146 -33273828 + T-rich Low_complexity Low_complexity 4 102 0 3 1120 189 0 0 0 chr15 70221916 70221937 -33273037 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1120 2294 58 27 0 chr15 70221937 70222232 -33272742 - L1Md_F2 LINE L1 -421 6161 5859 3 1120 3072 79 23 18 chr15 70222232 70222671 -33272303 + L1Md_F2 LINE L1 6141 6581 -1 3 1120 3187 176 34 15 chr15 70222694 70223312 -33271662 + Lx2B LINE L1 6370 6999 -1 3 1120 329 335 74 85 chr15 70223385 70223763 -33271211 - L1M5 LINE L1 -1253 4893 4520 3 1120 701 295 98 61 chr15 70224002 70224038 -33270936 - Lx8 LINE L1 -1 7472 7437 3 1120 4154 71 2 4 chr15 70224038 70224589 -33270385 - L1Md_F2 LINE L1 -8 6574 6025 3 1120 701 295 98 61 chr15 70224589 70224981 -33269993 - Lx8 LINE L1 -37 7436 7028 3 1120 335 247 85 11 chr15 70225706 70225800 -33269174 + U6 snRNA snRNA 7 107 0 3 1120 505 48 0 94 chr15 70226000 70226138 -33268836 + (CAAAA)n Simple_repeat Simple_repeat 4 128 0 3 1120 6202 146 9 0 chr15 70226386 70227361 -33267613 - Lx2 LINE L1 -47 6950 5967 3 1120 644 256 0 23 chr15 70227768 70227900 -33267074 + B3 SINE B2 2 130 -86 3 1120 402 21 0 0 chr15 70227905 70227952 -33267022 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1120 30 0 0 0 chr15 70227952 70227982 -33266992 + AT_rich Low_complexity Low_complexity 1 30 0 3 1120 2198 76 142 2 chr15 70228332 70228678 -33266296 - L1_Mus2 LINE L1 0 6638 6171 3 1120 342 355 15 7 chr15 70229239 70229375 -33265599 + MTEa LTR MaLR 1 137 -242 3 1120 596 291 110 59 chr15 70229369 70229723 -33265251 + MT2A LTR ERVL 160 531 -2 3 1120 779 318 93 9 chr15 70229847 70230171 -33264803 - MTEa LTR MaLR 0 379 29 3 1120 1847 208 69 3 chr15 70230176 70230537 -33264437 - ORR1B1 LTR MaLR -9 385 1 3 1120 22 0 0 0 chr15 70231629 70231651 -33263323 + AT_rich Low_complexity Low_complexity 1 22 0 3 1120 24 53 0 0 chr15 70232456 70232494 -33262480 + AT_rich Low_complexity Low_complexity 1 38 0 3 1120 1094 96 0 27 chr15 70232676 70232826 -33262148 + B1_Mm SINE Alu 2 147 0 3 1120 497 260 121 28 chr15 70232917 70233099 -33261875 - L1VL4 LINE L1 -5945 1037 839 3 1120 537 290 0 0 chr15 70234006 70234151 -33260823 - L1VL4 LINE L1 -5618 684 540 3 1120 882 45 0 0 chr15 70234361 70234473 -33260501 - B1_Mm SINE Alu -35 112 1 3 1120 441 207 0 123 chr15 70234473 70234499 -33260475 - MT2B LTR ERVL -337 264 144 3 1120 698 234 47 32 chr15 70234500 70234690 -33260284 - B3A SINE B2 -3 195 3 3 1120 231 262 62 0 chr15 70235042 70235122 -33259852 - L1MD3 LINE L1 0 7882 7798 3 1120 327 301 27 7 chr15 70235265 70235412 -33259562 - L1MD3 LINE L1 -277 7718 7569 3 1120 521 312 110 46 chr15 70235790 70236270 -33258704 + L1MC4a LINE L1 6169 6679 -1203 3 1120 509 68 14 0 chr15 70236278 70236352 -33258622 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 3 1120 300 309 12 0 chr15 70236413 70236494 -33258480 + ORR1E LTR MaLR 37 118 -241 3 1120 368 244 12 0 chr15 70236960 70237046 -33257928 - L1_Mur3 LINE L1 -4031 1849 1763 3 1120 279 0 0 0 chr15 70237077 70237108 -33257866 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1120 34 55 0 0 chr15 70237120 70237175 -33257799 + AT_rich Low_complexity Low_complexity 1 55 0 3 1120 781 154 0 19 chr15 70237508 70237667 -33257307 + GA-rich Low_complexity Low_complexity 2 157 0 3 1120 2582 244 83 50 chr15 70237673 70239775 -33255199 - L1_Mur3 LINE L1 -4105 1775 21 3 1120 288 0 0 0 chr15 70239779 70239811 -33255163 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1120 702 117 0 0 chr15 70239811 70239922 -33255052 + (GA)n Simple_repeat Simple_repeat 1 111 0 3 1120 1948 136 65 20 chr15 70240500 70240853 -33254121 - Lx LINE L1 -8 6646 6278 3 1120 204 143 0 0 chr15 70241007 70241049 -33253925 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1120 468 0 0 0 chr15 70242097 70242149 -33252825 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 1120 368 273 40 53 chr15 70242533 70242684 -33252290 + L1MA8 LINE L1 5607 5755 -545 3 1120 324 0 0 0 chr15 70242685 70242721 -33252253 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1120 630 281 136 15 chr15 70242756 70243153 -33251821 + L1MA8 LINE L1 5846 6290 -1 3 1120 1342 278 12 21 chr15 70244924 70245346 -33249628 - MTD LTR MaLR -1 418 1 3 1120 282 267 67 0 chr15 70246646 70246721 -33248253 - ID_B1 SINE B4 0 224 145 3 1120 603 280 35 70 chr15 70246799 70247171 -33247803 + RLTR10D LTR ERVK 1 359 0 3 1120 374 322 164 32 chr15 70247174 70247614 -33247360 - L1MEf LINE L1 -2144 4390 3893 3 1120 298 250 52 33 chr15 70247626 70247837 -33247137 - L1MEf LINE L1 -2722 3809 3595 3 1120 478 241 28 11 chr15 70248101 70248277 -33246697 - Lx9 LINE L1 -1 7643 7465 3 1120 951 260 34 43 chr15 70248282 70248608 -33246366 - Lx9 LINE L1 -135 7509 7187 3 1120 320 341 83 65 chr15 70248637 70248913 -33246061 - L1MEf LINE L1 -3196 3341 3061 3 1120 217 0 61 0 chr15 70249191 70249224 -33245750 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 1120 3149 66 0 12 chr15 70249224 70249638 -33245336 - L1_Mus1 LINE L1 -476 6091 5683 3 1120 3171 109 7 11 chr15 70249638 70250103 -33244871 + L1_Mus1 LINE L1 6105 6567 0 3 1120 387 257 40 46 chr15 70250121 70250272 -33244702 - L1MEf LINE L1 -3867 2664 2515 3 1120 24 0 0 0 chr15 70250859 70250883 -33244091 + AT_rich Low_complexity Low_complexity 1 24 0 3 1120 336 311 88 55 chr15 70252238 70252776 -33242198 - L1MEf LINE L1 -4889 1744 1165 3 1120 233 361 36 36 chr15 70252776 70252888 -33242086 - PB1D10 SINE Alu -5 112 1 3 1120 303 320 240 50 chr15 70252888 70253120 -33241854 - L1MEf LINE L1 -5361 1179 896 3 1120 497 68 14 0 chr15 70253525 70253599 -33241375 + (CA)n Simple_repeat Simple_repeat 1 75 0 3 1120 838 132 0 84 chr15 70253855 70254045 -33240929 - Lx LINE L1 -3 6651 6478 3 1120 241 383 55 16 chr15 70254197 70254380 -33240594 + MLT1J-int LTR MaLR 188 377 -1010 3 1121 25 0 0 0 chr15 70254598 70254623 -33240351 + AT_rich Low_complexity Low_complexity 1 25 0 3 1121 235 0 57 0 chr15 70254717 70254752 -33240222 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1121 445 231 32 40 chr15 70254866 70254992 -33239982 - B4 SINE B4 -166 126 2 3 1121 675 203 8 0 chr15 70255754 70255872 -33239102 + B1_Mus1 SINE Alu 11 129 -19 3 1121 258 32 0 0 chr15 70255875 70255906 -33239068 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 3 1121 241 347 235 8 chr15 70257170 70257289 -33237685 - B4A SINE B4 -146 146 1 3 1121 3653 115 4 2 chr15 70257349 70257891 -33237083 - L1_Mus3 LINE L1 -344 5539 4997 3 1121 6261 108 89 3 chr15 70257897 70258891 -33236083 + L1_Mus3 LINE L1 5555 6632 -6 3 1121 1182 269 19 7 chr15 70260899 70261206 -33233768 + Lx6 LINE L1 7131 7441 -19 3 1121 378 0 0 0 chr15 70262170 70262212 -33232762 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1121 435 68 0 0 chr15 70262212 70262271 -33232703 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 1121 722 176 7 0 chr15 70262268 70262416 -33232558 + GA-rich Low_complexity Low_complexity 3 151 0 3 1121 1559 39 0 22 chr15 70262418 70262787 -33232187 + (GAA)n Simple_repeat Simple_repeat 1 360 0 3 1121 241 239 129 20 chr15 70262790 70262991 -33231983 - RMER17C LTR ERVK -164 246 24 3 1121 31 0 0 0 chr15 70263776 70263807 -33231167 + AT_rich Low_complexity Low_complexity 1 31 0 3 1121 246 287 116 11 chr15 70263874 70263969 -33231005 + B1_Mus1 SINE Alu 27 131 -17 3 1121 361 313 17 9 chr15 70264246 70264362 -33230612 - PB1D10 SINE Alu 0 117 1 4 1121 2027 43 12 0 chr15 70264377 70264630 -33230344 - L1Md_F2 LINE L1 0 6582 6327 4 1121 2765 92 0 3 chr15 70264630 70265010 -33229964 - MTA_Mm LTR MaLR -17 379 1 4 1121 204 40 0 0 chr15 70265177 70265202 -33229772 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 4 1121 408 20 0 0 chr15 70266719 70266768 -33228206 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1121 297 0 0 0 chr15 70266768 70266801 -33228173 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1121 32 43 0 0 chr15 70266817 70266863 -33228111 + AT_rich Low_complexity Low_complexity 1 46 0 4 1121 374 341 60 22 chr15 70267136 70267319 -33227655 + Lx8 LINE L1 7046 7235 -238 4 1121 22 35 0 0 chr15 70267459 70267488 -33227486 + AT_rich Low_complexity Low_complexity 1 29 0 4 1121 26 0 0 0 chr15 70267950 70267976 -33226998 + AT_rich Low_complexity Low_complexity 1 26 0 4 1121 289 297 59 44 chr15 70268194 70268398 -33226576 + RLTR42-int LTR ERVK 1167 1373 -4149 4 1121 2610 221 118 0 chr15 70268443 70269087 -33225887 - RMER6D LTR ERVK 0 720 1 4 1121 1612 62 5 0 chr15 70269698 70269908 -33225066 - L1_Mus3 LINE L1 -600 6038 5828 4 1121 3380 112 52 0 chr15 70269909 70270425 -33224549 + L1_Mus3 LINE L1 6088 6630 -8 4 1121 29 60 0 0 chr15 70270536 70270586 -33224388 + AT_rich Low_complexity Low_complexity 1 50 0 4 1121 22 0 0 0 chr15 70270659 70270681 -33224293 + AT_rich Low_complexity Low_complexity 1 22 0 4 1121 26 64 0 0 chr15 70271037 70271084 -33223890 + AT_rich Low_complexity Low_complexity 1 47 0 4 1121 314 341 104 37 chr15 70271918 70272052 -33222922 + RSINE1 SINE B4 8 150 -15 4 1121 957 52 0 0 chr15 70272543 70272658 -33222316 - L1Md_F2 LINE L1 -335 6247 6133 4 1121 2313 83 9 38 chr15 70272658 70272997 -33221977 + L1Md_F2 LINE L1 6235 6563 -19 4 1121 1126 82 0 0 chr15 70273418 70273565 -33221409 + B1_Mm SINE Alu 1 147 0 4 1121 1144 287 127 13 chr15 70274885 70275024 -33219950 + L1_Mur3 LINE L1 5106 5244 -636 4 1121 468 0 0 0 chr15 70275024 70275076 -33219898 + (TTA)n Simple_repeat Simple_repeat 3 54 0 4 1121 1144 287 127 13 chr15 70275076 70275472 -33219502 + L1_Mur3 LINE L1 5245 5701 -179 4 1121 730 332 63 24 chr15 70275480 70275859 -33219115 + Lx8 LINE L1 7071 7464 -9 4 1121 3342 170 64 26 chr15 70276375 70277028 -33217946 - Lx4A LINE L1 0 7058 6381 4 1121 2407 133 16 0 chr15 70277033 70277401 -33217573 - L1_Mur2 LINE L1 -102 5775 5402 4 1121 3994 117 5 36 chr15 70277402 70277967 -33217007 + L1_Mur2 LINE L1 4732 5298 -579 4 1121 6772 140 46 6 chr15 70277962 70279097 -33215877 + Lx2 LINE L1 5811 6990 -7 4 1121 3994 117 5 36 chr15 70279097 70279203 -33215771 + L1_Mur2 LINE L1 5291 5377 -500 4 1121 21 0 0 0 chr15 70279365 70279386 -33215588 + AT_rich Low_complexity Low_complexity 1 21 0 4 1121 3357 38 2 0 chr15 70279788 70280183 -33214791 - MTA_Mm LTR MaLR 0 396 1 4 1121 302 165 15 45 chr15 70280903 70281038 -33213936 + (CAGAGA)n Simple_repeat Simple_repeat 1 130 0 4 1121 219 418 0 0 chr15 70281539 70281642 -33213332 - B3A SINE B2 -18 180 78 4 1121 21 0 0 0 chr15 70281740 70281761 -33213213 + AT_rich Low_complexity Low_complexity 1 21 0 4 1121 237 108 0 0 chr15 70281949 70281986 -33212988 + (ATTG)n Simple_repeat Simple_repeat 3 39 0 4 1121 468 244 63 0 chr15 70281991 70282118 -33212856 - B1F SINE Alu -1 148 14 4 1121 7184 60 46 2 chr15 70282175 70283118 -33211856 - L1Md_F2 LINE L1 -3 6579 5596 4 1121 189 94 0 0 chr15 70283482 70283514 -33211460 + (CCA)n Simple_repeat Simple_repeat 1 32 0 4 1121 484 130 11 11 chr15 70284310 70284403 -33210571 + (TA)n Simple_repeat Simple_repeat 2 94 0 4 1121 204 111 0 0 chr15 70284455 70284491 -33210483 + (TATG)n Simple_repeat Simple_repeat 1 36 0 4 1121 447 336 77 37 chr15 70284495 70284767 -33210207 - B4A SINE B4 -8 284 2 4 1121 545 305 29 43 chr15 70285400 70285609 -33209365 - B3 SINE B2 -6 210 5 4 1121 818 203 33 0 chr15 70286825 70286978 -33207996 + MTC LTR MaLR 1 158 -263 4 1121 336 48 0 0 chr15 70286982 70287024 -33207950 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1121 2572 81 0 0 chr15 70287051 70287386 -33207588 - L1_Mus2 LINE L1 -276 6290 5956 4 1121 622 75 0 0 chr15 70287386 70287480 -33207494 + L1_Mus2 LINE L1 6472 6565 -1 4 1121 186 43 0 0 chr15 70287493 70287516 -33207458 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1121 11923 117 27 11 chr15 70287535 70289983 -33204991 + L1VL2 LINE L1 314 2798 -817 4 1121 6459 93 82 14 chr15 70289977 70290999 -33203975 + L1_Mus3 LINE L1 5541 6633 -5 4 1121 426 206 31 8 chr15 70291050 70291177 -33203797 + A-rich Low_complexity Low_complexity 2 131 0 4 1121 273 296 28 0 chr15 70291177 70291248 -33203726 + polypurine Low_complexity Low_complexity 1 73 0 4 1121 565 188 12 36 chr15 70291249 70291406 -33203568 + GA-rich Low_complexity Low_complexity 1 154 0 4 1121 1023 113 0 28 chr15 70291406 70291588 -33203386 + (GGGAA)n Simple_repeat Simple_repeat 4 180 0 4 1121 363 113 0 0 chr15 70291593 70291655 -33203319 + (GGGGA)n Simple_repeat Simple_repeat 5 66 0 4 1121 3243 93 22 32 chr15 70291750 70292062 -33202912 - L1_Mur1 LINE L1 -385 5501 5194 4 1121 269 26 26 0 chr15 70292062 70292100 -33202874 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1121 3243 93 22 32 chr15 70292100 70292322 -33202652 - L1_Mur1 LINE L1 -693 5193 4972 4 1121 6224 100 80 2 chr15 70292323 70293272 -33201702 + Lx3_Mus LINE L1 5987 7009 0 4 1121 225 258 14 96 chr15 70294236 70294309 -33200665 + MLT1B LTR MaLR 2 68 -322 4 1121 1336 175 40 8 chr15 70294473 70294726 -33200248 + RMER5 LTR ERV1 274 534 0 4 1121 306 233 43 16 chr15 70295212 70295297 -33199677 - B2_Mm2 SINE B2 -108 108 27 4 1121 1223 184 118 11 chr15 70295654 70295924 -33199050 - Lx4A LINE L1 0 7058 6760 4 1121 4017 173 28 24 chr15 70295941 70296162 -33198812 + Lx4A LINE L1 6014 6230 -828 4 1121 2178 23 114 0 chr15 70296162 70296424 -33198550 - RLTR10B LTR ERVK 0 292 1 4 1121 4017 173 28 24 chr15 70296424 70296982 -33197992 + Lx4A LINE L1 6231 6796 -262 4 1121 22 0 0 0 chr15 70298899 70298921 -33196053 + AT_rich Low_complexity Low_complexity 1 22 0 4 1121 404 244 0 13 chr15 70299415 70299494 -33195480 - Lx5 LINE L1 -109 6941 6864 4 1121 200 128 26 0 chr15 70299901 70299940 -33195034 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 4 1121 268 260 71 20 chr15 70300144 70300242 -33194732 - PB1D7 SINE Alu -17 103 1 4 1121 1179 41 7 0 chr15 70300372 70300517 -33194457 - B1_Mm SINE Alu -1 146 1 4 1121 254 311 75 52 chr15 70300908 70301081 -33193893 - MLT1A LTR MaLR -8 366 190 4 1121 204 159 0 22 chr15 70301096 70301141 -33193833 + T-rich Low_complexity Low_complexity 3 46 0 4 1121 1981 104 0 14 chr15 70301152 70301445 -33193529 - L1Md_F2 LINE L1 -13 6569 6281 4 1121 499 274 37 0 chr15 70301486 70301621 -33193353 - RSINE1 SINE B4 -14 151 12 4 1121 1892 144 63 15 chr15 70302275 70302606 -33192368 - Lx LINE L1 -12 6642 6296 4 1121 1431 258 34 56 chr15 70302880 70303291 -33191683 + MTD LTR MaLR 2 403 -16 4 1121 724 359 19 68 chr15 70303355 70303869 -33191105 - Lx8 LINE L1 -58 7415 6927 4 1121 187 214 32 106 chr15 70305737 70305831 -33189143 + L3 LINE CR1 708 794 -3695 4 1121 981 274 124 63 chr15 70306562 70307088 -33187886 + RMER4B LTR ERVK 17 574 -11 4 1121 3565 221 34 32 chr15 70307125 70307248 -33187726 + MurERV4-int LTR ERVK 2210 2341 -2919 4 1121 307 55 18 18 chr15 70307248 70307303 -33187671 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 4 1121 3565 221 34 32 chr15 70307303 70308034 -33186940 + MurERV4-int LTR ERVK 2342 3065 -2195 4 1121 1029 106 0 0 chr15 70310285 70310427 -33184547 - B1_Mus1 SINE Alu 0 148 7 4 1121 402 232 8 111 chr15 70310320 70310446 -33184528 - MT2B LTR ERVL -337 264 152 4 1121 466 326 163 10 chr15 70310811 70311111 -33183863 - ORR1E LTR MaLR -2 357 12 4 1121 1181 62 0 0 chr15 70311558 70311704 -33183270 - B1_Mus1 SINE Alu -2 146 1 4 1121 279 0 0 0 chr15 70311994 70312025 -33182949 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 1121 282 29 0 0 chr15 70312598 70312633 -33182341 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1121 498 33 0 0 chr15 70314352 70314412 -33180562 + (TC)n Simple_repeat Simple_repeat 2 61 0 4 1121 714 34 0 0 chr15 70314412 70314500 -33180474 + (TG)n Simple_repeat Simple_repeat 2 90 0 4 1121 360 312 78 31 chr15 70314517 70314646 -33180328 - B3A SINE B2 -56 142 8 4 1121 1059 90 7 0 chr15 70315587 70315732 -33179242 + B1_Mm SINE Alu 2 147 0 4 1121 21934 5 0 0 chr15 70315968 70318455 -33176519 + L1Md_A LINE L1 3099 5586 -297 4 1121 8993 3 0 0 chr15 70318455 70319451 -33175523 + L1Md_A LINE L1 5587 6582 0 4 1121 476 291 36 29 chr15 70320594 70320732 -33174242 + B1F1 SINE Alu 1 139 -10 4 1121 383 330 49 108 chr15 70320880 70321084 -33173890 + B4A SINE B4 2 193 -99 4 1121 293 242 45 136 chr15 70321078 70321188 -33173786 - B1F2 SINE Alu -26 123 24 4 1121 222 37 0 0 chr15 70321199 70321226 -33173748 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 1121 661 254 133 19 chr15 70321332 70321620 -33173354 - MT2A LTR ERVL -112 489 87 4 1121 2283 94 6 15 chr15 70321665 70321998 -33172976 - Lx3_Mus LINE L1 -572 6437 6108 4 1121 3886 103 7 5 chr15 70321998 70322573 -33172401 + Lx3_Mus LINE L1 6426 7001 -8 4 1121 386 233 12 0 chr15 70322585 70322671 -33172303 - MT2A LTR ERVL -446 87 1 4 1121 26 30 0 0 chr15 70322700 70322733 -33172241 + AT_rich Low_complexity Low_complexity 1 33 0 4 1121 793 283 21 42 chr15 70322960 70323152 -33171822 - B3 SINE B2 -28 188 1 4 1121 1667 209 92 29 chr15 70324025 70324261 -33170713 - Lx2B LINE L1 0 7000 6757 4 1121 438 20 0 0 chr15 70324261 70324312 -33170662 + (GA)n Simple_repeat Simple_repeat 1 51 0 4 1121 1667 209 92 29 chr15 70324312 70324523 -33170451 - Lx2B LINE L1 -244 6756 6525 4 1121 497 164 21 7 chr15 70325091 70325232 -33169742 + (TA)n Simple_repeat Simple_repeat 1 143 0 4 1121 324 0 0 0 chr15 70325551 70325587 -33169387 + (TC)n Simple_repeat Simple_repeat 2 37 0 4 1121 342 0 0 0 chr15 70325587 70325624 -33169350 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1121 195 42 0 0 chr15 70326371 70326395 -33168579 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1121 2425 73 29 6 chr15 70326726 70327069 -33167905 - L1_Mus2 LINE L1 -1 6565 6215 4 1121 1213 148 0 5 chr15 70327069 70327273 -33167701 + L1_Mur3 LINE L1 3614 3816 -2064 5 1121 320 321 87 28 chr15 70327809 70328027 -33166947 - L1ME4a LINE L1 -180 5944 5714 5 1121 342 0 0 0 chr15 70329545 70329583 -33165391 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1121 197 197 16 0 chr15 70329606 70329667 -33165307 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 5 1121 943 110 14 0 chr15 70329869 70330014 -33164960 - B1_Mus1 SINE Alu 0 148 2 5 1121 7107 76 55 0 chr15 70330110 70331263 -33163711 + L1VL1 LINE L1 194 1437 -2261 5 1121 332 71 0 51 chr15 70331263 70331322 -33163652 + L1_Mus2 LINE L1 6510 6565 -1 5 1121 581 171 117 35 chr15 70332056 70332201 -33162773 - Lx4A LINE L1 0 7058 6902 5 1121 1204 41 7 0 chr15 70333085 70333230 -33161744 - B1_Mus2 SINE Alu -1 146 1 5 1121 2562 24 0 0 chr15 70335426 70335721 -33159253 + L1Md_T LINE L1 5292 5586 -297 5 1121 8134 43 0 5 chr15 70335721 70336722 -33158252 + L1Md_T LINE L1 5587 6582 0 5 1121 300 91 0 0 chr15 70337146 70337190 -33157784 + (CTG)n Simple_repeat Simple_repeat 1 44 0 5 1121 824 286 135 33 chr15 70337951 70338255 -33156719 - MTE2b LTR MaLR -13 366 32 5 1121 329 85 0 0 chr15 70338255 70338302 -33156672 + L1_Mus3 LINE L1 5915 5961 -677 5 1121 577 117 18 9 chr15 70338306 70338418 -33156556 + L1_Mus3 LINE L1 6525 6637 -1 5 1121 218 191 0 0 chr15 70338851 70338898 -33156076 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1121 674 105 9 0 chr15 70338898 70339003 -33155971 + (GA)n Simple_repeat Simple_repeat 1 106 0 5 1121 225 94 0 0 chr15 70340964 70340996 -33153978 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 1121 409 318 118 59 chr15 70342381 70342702 -33152272 - Lx8 LINE L1 -116 7357 7018 5 1121 4494 43 0 0 chr15 70342781 70343321 -33151653 + L1Md_T LINE L1 6043 6582 0 5 1121 453 19 0 0 chr15 70343679 70343733 -33151241 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 1121 264 365 36 62 chr15 70344483 70344676 -33150298 + MLT1K LTR MaLR 351 538 -57 5 1121 1555 32 0 16 chr15 70345101 70345290 -33149684 + B2_Mm1a SINE B2 1 186 -7 5 1121 228 122 0 0 chr15 70346124 70346165 -33148809 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 1121 36 53 0 0 chr15 70347335 70347392 -33147582 + AT_rich Low_complexity Low_complexity 1 57 0 5 1121 3622 47 16 0 chr15 70347442 70347894 -33147080 - L1Md_F3 LINE L1 0 6584 6126 5 1121 376 279 123 26 chr15 70348044 70348239 -33146735 - B3 SINE B2 0 216 3 5 1121 10290 26 0 0 chr15 70348410 70349616 -33145358 + L1Md_T LINE L1 4381 5586 -297 5 1121 8350 37 0 0 chr15 70349616 70350611 -33144363 + L1Md_T LINE L1 5587 6581 -1 5 1121 24 53 0 0 chr15 70352088 70352126 -33142848 + AT_rich Low_complexity Low_complexity 1 38 0 5 1121 328 345 28 33 chr15 70352533 70352746 -33142228 - Lx8 LINE L1 -301 7172 6961 5 1121 1485 314 67 21 chr15 70353391 70354046 -33140928 + Lx8 LINE L1 6788 7472 -1 5 1121 227 189 30 40 chr15 70354048 70354121 -33140853 + (TA)n Simple_repeat Simple_repeat 2 73 0 5 1121 453 36 0 0 chr15 70354121 70354176 -33140798 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1121 227 189 30 40 chr15 70354176 70354201 -33140773 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 1121 3698 234 58 15 chr15 70354819 70355773 -33139201 - RLTR25A LTR ERVK 0 1028 11 5 1121 495 183 90 90 chr15 70355789 70355933 -33139041 + B1_Mus1 SINE Alu 5 148 0 5 1121 241 167 33 16 chr15 70355933 70355994 -33138980 + A-rich Low_complexity Low_complexity 4 65 0 5 1121 632 175 8 0 chr15 70356370 70356496 -33138478 + (TA)n Simple_repeat Simple_repeat 2 128 0 5 1121 408 175 0 0 chr15 70356544 70356607 -33138367 - tRNA-Lys-AAG tRNA tRNA 0 76 14 5 1121 2639 83 8 3 chr15 70356704 70357067 -33137907 - L1_Mus3 LINE L1 0 6638 6274 5 1121 7487 110 2 8 chr15 70357289 70358400 -33136574 - L1_Mus4 LINE L1 0 6636 5559 5 1121 214 190 17 33 chr15 70358863 70358952 -33136022 + (TTTG)n Simple_repeat Simple_repeat 1 87 0 5 1121 26 0 0 0 chr15 70359725 70359751 -33135223 + AT_rich Low_complexity Low_complexity 1 26 0 5 1121 420 20 0 0 chr15 70360094 70360143 -33134831 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1121 189 393 35 14 chr15 70361487 70361629 -33133345 + MIRb SINE MIR 111 255 -13 5 1121 964 306 92 8 chr15 70361703 70362062 -33132912 - MTD LTR MaLR -16 403 15 5 1121 36778 26 0 7 chr15 70362450 70367436 -33127538 + L1Md_A LINE L1 643 5586 -297 5 1121 8147 42 1 1 chr15 70367436 70368429 -33126545 + L1Md_A LINE L1 5587 6579 -3 5 1121 4357 148 18 0 chr15 70369124 70369805 -33125169 + RMER19A LTR ERVK 2 694 -43 5 1121 1710 158 37 16 chr15 70370951 70371273 -33123701 + ORR1A4 LTR MaLR 1 329 0 5 1121 222 320 58 29 chr15 70372545 70372637 -33122337 + B1_Mus1 SINE Alu 28 123 -25 5 1121 678 75 0 0 chr15 70372637 70372730 -33122244 + (TC)n Simple_repeat Simple_repeat 2 94 0 5 1121 1205 55 0 0 chr15 70373099 70373245 -33121729 - B1_Mm SINE Alu 0 147 2 5 1121 2322 272 88 43 chr15 70373254 70374004 -33120970 - Lx6 LINE L1 -9 7451 6668 5 1121 1603 216 79 57 chr15 70374011 70374110 -33120864 - Lx6 LINE L1 -1222 6238 6124 5 1121 315 0 0 0 chr15 70374110 70374145 -33120829 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1121 1603 216 79 57 chr15 70374145 70374536 -33120438 - Lx6 LINE L1 -1337 6123 5737 5 1121 1197 232 4 8 chr15 70374814 70375057 -33119917 + Lx7 LINE L1 6795 7036 -660 5 1121 234 0 0 0 chr15 70375057 70375083 -33119891 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 5 1121 2449 198 41 10 chr15 70375096 70375607 -33119367 - RLTR11A LTR ERVK 0 528 2 5 1121 546 307 24 24 chr15 70375630 70375837 -33119137 + Lx7 LINE L1 7062 7268 -428 5 1121 2632 92 3 3 chr15 70375835 70376207 -33118767 + L1Md_F2 LINE L1 5215 5586 -297 5 1121 7676 59 13 5 chr15 70376207 70377195 -33117779 + L1Md_F2 LINE L1 5587 6582 0 5 1121 228 289 47 19 chr15 70377199 70377305 -33117669 + Lx7 LINE L1 7260 7368 -328 5 1121 229 175 0 34 chr15 70377305 70377364 -33117610 + T-rich Low_complexity Low_complexity 4 60 0 5 1121 269 259 8 22 chr15 70377365 70377499 -33117475 + Lx7 LINE L1 7356 7487 -209 5 1121 31 58 0 0 chr15 70377499 70377551 -33117423 + AT_rich Low_complexity Low_complexity 1 52 0 5 1121 327 49 0 0 chr15 70377939 70377980 -33116994 + (TATAA)n Simple_repeat Simple_repeat 5 45 0 5 1121 498 224 61 7 chr15 70377986 70378134 -33116840 - Lx7 LINE L1 -185 7511 7356 5 1121 306 0 0 0 chr15 70378142 70378176 -33116798 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1121 246 246 0 80 chr15 70378220 70378295 -33116679 - Lx7 LINE L1 -333 7363 7295 5 1121 195 100 0 0 chr15 70378442 70378472 -33116502 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1121 206 232 43 0 chr15 70378854 70379025 -33115949 + (TA)n Simple_repeat Simple_repeat 1 178 0 5 1121 864 274 68 19 chr15 70379341 70379605 -33115369 - ORR1D2 LTR MaLR 0 370 94 5 1121 2531 132 34 0 chr15 70379611 70380020 -33114954 - L1_Mus3 LINE L1 -3 6635 6213 5 1121 614 66 0 0 chr15 70380020 70380096 -33114878 + L1_Mus4 LINE L1 5602 5677 -959 5 1121 5895 69 18 5 chr15 70380096 70380913 -33114061 - L1_Mus1 LINE L1 0 6567 5768 5 1121 255 83 0 0 chr15 70380915 70380951 -33114023 + L1_Mus1 LINE L1 5775 5810 -828 5 1121 702 184 0 0 chr15 70381842 70381967 -33113007 - URR1B DNA MER1_type 0 225 101 5 1121 557 168 88 37 chr15 70381993 70382129 -33112845 - B1_Mur4 SINE Alu -7 143 1 5 1121 374 137 74 120 chr15 70382129 70382237 -33112737 - URR1B DNA MER1_type -118 107 5 5 1121 23 33 0 0 chr15 70382696 70382726 -33112248 + AT_rich Low_complexity Low_complexity 1 30 0 5 1121 1004 119 0 0 chr15 70382768 70382911 -33112063 - B1_Mus1 SINE Alu -5 143 1 5 1121 342 0 0 0 chr15 70384453 70384491 -33110483 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1121 475 319 7 48 chr15 70384526 70384671 -33110303 - RSINE1 SINE B4 0 165 27 5 1121 184 250 62 77 chr15 70384910 70384975 -33109999 + MIRb SINE MIR 114 177 -91 5 1121 323 302 54 36 chr15 70384978 70385146 -33109828 - L2a LINE L2 -6 3420 3250 5 1122 275 339 47 42 chr15 70386090 70386281 -33108693 + MIRb SINE MIR 5 196 -72 5 1122 29 70 0 0 chr15 70387240 70387297 -33107677 + AT_rich Low_complexity Low_complexity 1 57 0 5 1122 3055 231 40 12 chr15 70387548 70388232 -33106742 - Lx6 LINE L1 -5 7455 6753 5 1122 225 0 0 0 chr15 70388235 70388260 -33106714 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 5 1122 3366 193 90 70 chr15 70388274 70388470 -33106504 + RMER19B LTR ERVK 56 240 -662 5 1122 243 0 0 0 chr15 70388470 70388497 -33106477 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 5 1122 3366 190 88 75 chr15 70388497 70389150 -33105824 + RMER19B LTR ERVK 241 902 0 5 1122 237 204 0 0 chr15 70389177 70389221 -33105753 - Lx6 LINE L1 -714 6746 6703 5 1122 3244 176 16 28 chr15 70389233 70389848 -33105126 - RMER1A Other Other -1 1029 422 5 1122 423 38 0 0 chr15 70389864 70389917 -33105057 + (ATTTG)n Simple_repeat Simple_repeat 4 56 0 5 1122 984 90 21 0 chr15 70390105 70390249 -33104725 - B1_Mm SINE Alu 0 147 1 5 1122 367 261 15 92 chr15 70390137 70390268 -33104706 - MT2B LTR ERVL -337 264 144 5 1122 1230 209 49 30 chr15 70390281 70390547 -33104427 - Lx6 LINE L1 -799 6661 6391 5 1122 1089 266 108 37 chr15 70390573 70391080 -33103894 + RMER20B LTR ERVK 1 543 -84 5 1122 294 295 0 25 chr15 70391184 70391264 -33103710 + RMER20B LTR ERVK 527 604 -23 5 1122 405 291 106 20 chr15 70392887 70393133 -33101841 - L1MCa LINE L1 -3768 2553 2287 5 1122 22 35 0 0 chr15 70393438 70393467 -33101507 + AT_rich Low_complexity Low_complexity 1 29 0 5 1122 235 354 10 50 chr15 70393487 70393588 -33101386 + PB1D10 SINE Alu 21 117 0 5 1122 274 182 45 0 chr15 70393635 70393701 -33101273 + BC1_Mm scRNA scRNA 44 112 -40 5 1122 1328 297 28 3 chr15 70393711 70394069 -33100905 + ORR1D2 LTR MaLR 1 367 -3 5 1122 373 312 25 26 chr15 70394115 70394357 -33100617 - L1MCa LINE L1 -4429 1912 1565 5 1122 21026 181 31 64 chr15 70394928 70395967 -33099007 + Lx3B LINE L1 946 2019 -3867 5 1122 384 22 0 0 chr15 70395967 70396012 -33098962 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1122 21026 169 30 84 chr15 70396012 70396568 -33098406 + Lx3B LINE L1 2020 2566 -3320 5 1122 307 264 14 0 chr15 70396568 70396640 -33098334 - RLTR10A LTR ERVK 0 411 339 5 1122 21026 169 30 84 chr15 70396640 70396676 -33098298 + Lx3B LINE L1 2567 2601 -3285 5 1122 362 342 26 26 chr15 70396676 70396865 -33098109 - RLTR10A LTR ERVK -76 335 147 5 1122 21026 169 30 84 chr15 70396865 70398633 -33096341 + Lx3B LINE L1 2602 4343 -1543 5 1122 303 28 0 0 chr15 70398633 70398669 -33096305 + (GAAAA)n Simple_repeat Simple_repeat 2 37 0 5 1122 21026 149 19 45 chr15 70398669 70401289 -33093685 + Lx3B LINE L1 4344 6970 -3 5 1122 288 0 0 0 chr15 70401296 70401328 -33093646 + (TAA)n Simple_repeat Simple_repeat 2 33 0 5 1122 966 144 5 62 chr15 70401330 70401538 -33093436 + Lx3C LINE L1 5743 5938 -1038 5 1122 243 0 0 0 chr15 70401908 70401935 -33093039 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1122 1964 110 14 0 chr15 70402025 70402315 -33092659 - L1_Mus3 LINE L1 -2 6636 6343 5 1122 2837 110 42 0 chr15 70402316 70402744 -33092230 + L1_Mus3 LINE L1 5872 6317 -321 5 1122 536 271 73 112 chr15 70403764 70403997 -33090977 + Tigger7 DNA MER2_type 243 466 -2025 5 1122 736 261 142 4 chr15 70404009 70404248 -33090726 - ORR1D1 LTR MaLR -11 363 92 5 1122 1014 223 63 5 chr15 70404243 70404464 -33090510 + ORR1B1 LTR MaLR 161 394 0 6 1122 384 77 0 0 chr15 70405726 70405778 -33089196 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1122 1019 324 35 51 chr15 70405778 70406152 -33088822 - MTE2a LTR MaLR -5 374 7 6 1122 186 311 33 0 chr15 70406180 70406241 -33088733 - L2 LINE L2 -755 2664 2602 6 1122 318 267 0 0 chr15 70407034 70407120 -33087854 + Lx9 LINE L1 7302 7387 -257 6 1122 495 0 0 0 chr15 70407171 70407226 -33087748 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1122 632 252 0 20 chr15 70408343 70408493 -33086481 + B1_Mus1 SINE Alu 1 147 -1 6 1122 1161 64 0 0 chr15 70408582 70408723 -33086251 + B1_Mm SINE Alu 1 141 -6 6 1122 207 0 0 0 chr15 70408725 70408748 -33086226 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1122 3531 127 65 7 chr15 70409431 70410026 -33084948 - Lx LINE L1 -7 6647 6018 6 1122 367 280 1 37 chr15 70410214 70410339 -33084635 - MTEa LTR MaLR -3 376 255 6 1122 224 227 0 0 chr15 70410418 70410462 -33084512 + B2_Mm2 SINE B2 1 44 -151 6 1122 273 329 60 20 chr15 70410475 70410624 -33084350 - B3 SINE B2 -35 181 27 6 1122 207 204 0 0 chr15 70410891 70410945 -33084029 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1122 574 327 29 19 chr15 70411752 70411958 -33083016 + B3 SINE B2 9 216 0 6 1122 632 98 0 21 chr15 70412080 70412174 -33082800 + Lx3_Mus LINE L1 6540 6631 -378 6 1122 4477 57 15 7 chr15 70412178 70412764 -33082210 - L1Md_F3 LINE L1 0 6584 5994 6 1122 433 316 35 0 chr15 70412780 70412894 -33082080 + ORR1E LTR MaLR 76 193 -166 6 1122 1890 125 51 13 chr15 70412922 70413237 -33081737 + ORR1A2 LTR MaLR 1 327 0 6 1122 851 338 124 75 chr15 70413422 70414177 -33080797 + ORR1E-int LTR MaLR 672 1434 -146 6 1122 573 323 35 25 chr15 70414184 70414384 -33080590 + ORR1E LTR MaLR 1 202 -157 6 1122 275 185 19 0 chr15 70414447 70414501 -33080473 + ORR1E LTR MaLR 325 379 0 6 1122 267 31 0 0 chr15 70415336 70415368 -33079606 + (TTG)n Simple_repeat Simple_repeat 3 34 0 6 1122 340 279 18 18 chr15 70415369 70415482 -33079492 - Lx9 LINE L1 -218 7426 7314 6 1122 504 305 50 12 chr15 70416630 70416968 -33078006 + L1MCb LINE L1 816 1166 -4879 6 1122 21 0 0 0 chr15 70417145 70417166 -33077808 + AT_rich Low_complexity Low_complexity 1 21 0 6 1122 424 319 49 80 chr15 70417294 70417621 -33077353 + L1MC LINE L1 5024 5340 -806 6 1122 463 321 24 54 chr15 70417887 70418055 -33076919 + B4A SINE B4 45 207 -85 6 1122 266 272 43 21 chr15 70418066 70418160 -33076814 + Lx8 LINE L1 6808 6903 -570 6 1122 610 211 19 24 chr15 70418162 70418356 -33076618 + RMER10A LTR ERVL 303 441 -1 6 1122 266 233 91 119 chr15 70419522 70419741 -33075233 + RLTR19-int LTR ERVK 2861 3073 -3064 6 1122 5070 184 25 76 chr15 70419953 70420470 -33074504 + RLTR25A LTR ERVK 1 503 -600 6 1122 288 0 0 0 chr15 70420470 70420502 -33074472 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 6 1122 5070 184 25 76 chr15 70420502 70421146 -33073828 + RLTR25A LTR ERVK 504 1103 0 6 1122 7746 108 2 1 chr15 70421367 70422486 -33072488 - L1_Mus3 LINE L1 -379 5504 4385 6 1122 7078 117 6 1 chr15 70422490 70423606 -33071368 + L1_Mus3 LINE L1 5513 6636 -2 6 1122 31 0 0 0 chr15 70423606 70423637 -33071337 + AT_rich Low_complexity Low_complexity 1 31 0 6 1122 186 43 0 0 chr15 70423641 70423664 -33071310 + (GAA)n Simple_repeat Simple_repeat 2 24 0 6 1122 256 285 53 99 chr15 70423704 70423856 -33071118 + RMER17C-int LTR ERVK 2744 2888 -350 6 1122 280 294 0 14 chr15 70424049 70424118 -33070856 + RLTR19-int LTR ERVK 4252 4319 -1818 6 1122 1387 242 71 33 chr15 70424167 70424590 -33070384 + RMER10A LTR ERVL 1 439 -3 6 1122 258 32 0 0 chr15 70425432 70425463 -33069511 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1122 1230 86 0 0 chr15 70425735 70426005 -33068969 + (CA)n Simple_repeat Simple_repeat 1 270 0 6 1122 24 67 0 0 chr15 70426215 70426260 -33068714 + AT_rich Low_complexity Low_complexity 1 45 0 6 1122 4955 255 111 19 chr15 70426926 70427487 -33067487 - Lx6 LINE L1 -27 7433 6764 6 1122 306 0 0 0 chr15 70427487 70427521 -33067453 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 6 1122 4955 255 111 19 chr15 70427521 70428435 -33066539 - Lx6 LINE L1 -697 6763 5824 6 1122 910 197 5 18 chr15 70428424 70428641 -33066333 - L1_Mur3 LINE L1 -965 4915 4702 6 1122 443 178 0 0 chr15 70428641 70428731 -33066243 - L1_Mur1 LINE L1 -1288 4598 4509 6 1122 1758 205 8 113 chr15 70428732 70429451 -33065523 - L1_Mur3 LINE L1 -4295 1585 976 6 1122 915 117 490 0 chr15 70429453 70429643 -33065331 + ORR1A2 LTR MaLR 1 283 -44 6 1122 312 290 32 11 chr15 70429669 70429763 -33065211 - L1_Mur3 LINE L1 -7569 159 64 6 1122 471 185 0 0 chr15 70432015 70432107 -33062867 + (TA)n Simple_repeat Simple_repeat 1 92 0 6 1122 2030 110 3 0 chr15 70434146 70434436 -33060538 - ORR1A2 LTR MaLR -8 319 29 6 1122 308 393 101 30 chr15 70434559 70434926 -33060048 + MLT1J2 LTR MaLR 7 399 -49 6 1122 731 318 116 39 chr15 70435087 70435424 -33059550 - ORR1D2 LTR MaLR 0 370 8 6 1122 350 21 21 0 chr15 70435525 70435572 -33059402 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1122 26037 72 12 2 chr15 70437746 70441944 -33053030 - L1Md_F2 LINE L1 -12 6570 2327 6 1122 7942 95 3 25 chr15 70441941 70443240 -33051734 - L1Md_F2 LINE L1 -4352 1531 253 6 1122 1183 34 7 7 chr15 70443240 70443388 -33051586 - B1_Mus1 SINE Alu 0 148 1 6 1122 7942 89 2 23 chr15 70443388 70443478 -33051496 - L1Md_F2 LINE L1 -6364 252 163 6 1122 37 23 0 0 chr15 70443614 70443658 -33051316 + AT_rich Low_complexity Low_complexity 1 44 0 6 1122 883 98 0 0 chr15 70443660 70443782 -33051192 - B2_Mm2 SINE B2 -73 122 1 6 1122 666 346 58 47 chr15 70444283 70444647 -33050327 - MTEb LTR MaLR -2 377 10 6 1122 28 61 0 0 chr15 70444659 70444708 -33050266 + AT_rich Low_complexity Low_complexity 1 49 0 6 1122 4458 150 6 24 chr15 70444887 70445667 -33049307 + Lx3B LINE L1 6208 6973 0 6 1122 180 135 0 0 chr15 70445681 70445718 -33049256 + (CAA)n Simple_repeat Simple_repeat 2 38 0 6 1122 225 0 0 0 chr15 70445718 70445743 -33049231 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 6 1122 2708 307 77 12 chr15 70445797 70446736 -33048238 - Lx7 LINE L1 -416 7280 6281 6 1122 202 297 47 47 chr15 70447382 70447488 -33047486 - L3 LINE CR1 -54 4435 4330 6 1122 325 292 5 63 chr15 70447519 70447709 -33047265 + (CAA)n Simple_repeat Simple_repeat 1 179 0 6 1122 216 86 0 0 chr15 70447910 70447945 -33047029 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1122 186 103 0 0 chr15 70450141 70450170 -33044804 + (TCCA)n Simple_repeat Simple_repeat 4 32 0 6 1122 1834 256 85 43 chr15 70452304 70452997 -33041977 + RMER6C LTR ERVK 1 697 -59 6 1122 930 178 0 45 chr15 70452988 70453165 -33041809 + RMER6D LTR ERVK 552 720 0 6 1122 269 303 234 0 chr15 70453568 70453743 -33041231 + ID_B1 SINE B4 1 216 -8 6 1122 23 0 0 0 chr15 70453786 70453809 -33041165 + AT_rich Low_complexity Low_complexity 1 23 0 6 1122 425 207 34 25 chr15 70455651 70455770 -33039204 + RLTR15 LTR ERVK 2 121 -238 6 1122 588 281 6 0 chr15 70457348 70457508 -33037466 + Lx8 LINE L1 6721 6881 -592 6 1122 337 331 73 11 chr15 70457510 70457687 -33037287 + Lx8 LINE L1 7045 7232 -241 6 1122 3975 77 0 4 chr15 70457687 70458198 -33036776 + L1_Mus1 LINE L1 6058 6566 -1 6 1122 236 30 30 0 chr15 70458458 70458491 -33036483 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 1122 261 167 0 0 chr15 70458492 70458546 -33036428 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1122 441 110 0 0 chr15 70459325 70459407 -33035567 + (TC)n Simple_repeat Simple_repeat 2 83 0 6 1122 2170 316 78 25 chr15 70460784 70461210 -33033764 - Lx8 LINE L1 -59 7414 6965 6 1122 1619 66 57 0 chr15 70461210 70461438 -33033536 + L1Md_F3 LINE L1 6341 6581 -3 6 1122 2170 316 78 25 chr15 70461438 70461977 -33032997 - Lx8 LINE L1 -509 6964 6393 6 1122 1864 222 14 12 chr15 70461977 70462396 -33032578 - MTC LTR MaLR -1 420 1 6 1122 2170 316 78 25 chr15 70462396 70462580 -33032394 - Lx8 LINE L1 -1081 6392 6204 6 1122 30 45 0 0 chr15 70462583 70462627 -33032347 + AT_rich Low_complexity Low_complexity 1 44 0 6 1122 235 312 138 15 chr15 70462689 70462884 -33032090 - Lx8 LINE L1 -56 7417 7199 6 1122 251 281 162 7 chr15 70466148 70466284 -33028690 - ERVL-E-int LTR ERVL -1550 4117 3961 6 1122 678 226 62 12 chr15 70466407 70466568 -33028406 - RMER15 LTR ERVL -111 464 296 6 1122 256 376 64 68 chr15 70467701 70467952 -33027022 + ORR1E LTR MaLR 64 313 -46 6 1122 1076 85 0 0 chr15 70468309 70468450 -33026524 - B1_Mus1 SINE Alu -6 142 2 6 1122 354 298 196 44 chr15 70468797 70469276 -33025698 + L1M5 LINE L1 3785 4344 -1802 6 1122 2317 105 3 9 chr15 70469276 70469603 -33025371 + ORR1A2 LTR MaLR 1 325 -2 6 1122 354 298 196 44 chr15 70469603 70469668 -33025306 + L1M5 LINE L1 4345 4412 -1734 6 1122 2113 191 28 2 chr15 70469758 70470152 -33024822 + MTC LTR MaLR 18 421 0 6 1122 228 340 53 44 chr15 70470152 70470263 -33024711 + B3A SINE B2 80 191 -7 6 1122 225 174 29 14 chr15 70470307 70470377 -33024597 + (TA)n Simple_repeat Simple_repeat 1 71 0 6 1122 528 286 18 68 chr15 70470609 70470830 -33024144 - B3 SINE B2 -6 210 1 6 1122 256 378 36 36 chr15 70473907 70474132 -33020842 + Tigger9b DNA MER2_type 399 623 -1 6 1122 195 229 0 0 chr15 70477118 70477179 -33017795 + (TA)n Simple_repeat Simple_repeat 1 61 0 6 1122 498 75 0 0 chr15 70477179 70477246 -33017728 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1122 1945 218 51 24 chr15 70477963 70478117 -33016857 - MTC LTR MaLR 0 421 268 6 1122 963 18 0 0 chr15 70478117 70478230 -33016744 + (CA)n Simple_repeat Simple_repeat 2 114 0 6 1122 1945 218 51 24 chr15 70478230 70478485 -33016489 - MTC LTR MaLR -154 267 1 6 1122 911 56 8 0 chr15 70478527 70478653 -33016321 + (GA)n Simple_repeat Simple_repeat 2 128 0 6 1122 458 216 40 0 chr15 70478653 70478801 -33016173 + GA-rich Low_complexity Low_complexity 3 156 0 6 1122 338 314 105 19 chr15 70478862 70479119 -33015855 - L1MB2 LINE L1 -102 6069 5791 6 1122 832 291 72 14 chr15 70479379 70479613 -33015361 + Lx8 LINE L1 6825 7076 -397 6 1122 1496 206 53 32 chr15 70479613 70479989 -33014985 + ORR1C2 LTR MaLR 1 384 0 6 1122 832 291 72 14 chr15 70479989 70480033 -33014941 + Lx8 LINE L1 7077 7119 -354 6 1122 243 125 0 0 chr15 70480536 70480576 -33014398 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 6 1122 209 292 139 0 chr15 70480622 70480694 -33014280 - MIR SINE MIR -68 140 59 6 1122 294 106 0 0 chr15 70480861 70480908 -33014066 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1122 1936 208 24 5 chr15 70481654 70482010 -33012964 - MTC LTR MaLR -2 419 58 7 1122 216 0 0 0 chr15 70482010 70482034 -33012940 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1122 1936 208 24 5 chr15 70482034 70482088 -33012886 - MTC LTR MaLR -364 57 2 7 1122 396 295 7 103 chr15 70482688 70482897 -33012077 + RMER17C LTR ERVK 1 182 -228 7 1122 651 88 0 0 chr15 70482897 70482988 -33011986 + (TCCCC)n Simple_repeat Simple_repeat 1 91 0 7 1122 396 295 7 103 chr15 70482988 70483001 -33011973 + RMER17C LTR ERVK 183 195 -215 7 1122 1147 95 6 11 chr15 70483001 70483182 -33011792 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 7 1122 396 295 7 103 chr15 70483182 70483230 -33011744 + RMER17C LTR ERVK 196 244 -166 7 1122 402 74 0 0 chr15 70483230 70483284 -33011690 + (TCTCC)n Simple_repeat Simple_repeat 5 58 0 7 1122 2342 212 84 14 chr15 70483288 70484080 -33010894 - Lx6 LINE L1 -1359 6101 5265 7 1122 38818 34 4 5 chr15 70484077 70490258 -33004716 - L1Md_T LINE L1 0 6582 416 7 1122 1246 211 39 10 chr15 70490259 70490566 -33004408 - L1_Mur3 LINE L1 -582 5298 4983 7 1122 1431 180 7 214 chr15 70490561 70491163 -33003811 - L1_Mur3 LINE L1 -2157 3723 3247 7 1122 1587 246 101 62 chr15 70491150 70492219 -33002755 - L1_Mur3 LINE L1 -4231 1649 550 7 1122 258 258 166 4 chr15 70492307 70492434 -33002540 + ORR1C2 LTR MaLR 61 194 -190 7 1122 752 263 44 18 chr15 70492445 70492666 -33002308 + ORR1C2 LTR MaLR 153 384 0 7 1122 583 277 99 13 chr15 70492710 70493083 -33001891 - L1M3 LINE L1 -1583 4557 4153 7 1122 907 291 36 15 chr15 70493117 70493508 -33001466 + L1_Mur3 LINE L1 5393 5791 -89 7 1122 6122 153 11 24 chr15 70493507 70494615 -33000359 - L1_Mm LINE L1 -316 5567 4474 7 1122 7214 100 21 1 chr15 70494632 70495655 -32999319 + L1_Mus3 LINE L1 5588 6631 -7 7 1122 1968 360 83 17 chr15 70495747 70497159 -32997815 + Lx8 LINE L1 5774 7278 -195 7 1122 4167 33 2 0 chr15 70497169 70497660 -32997314 + L1Md_T LINE L1 6091 6582 0 7 1122 207 167 0 0 chr15 70500922 70500964 -32994010 + (CATA)n Simple_repeat Simple_repeat 3 44 0 1 1122 203 250 0 20 chr15 70500964 70501013 -32993961 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1122 583 343 52 48 chr15 70501062 70501310 -32993664 - B4A SINE B4 -43 249 1 3 1122 213 195 0 0 chr15 70501633 70501674 -32993300 + (TCTG)n Simple_repeat Simple_repeat 4 44 0 4 1122 488 339 0 16 chr15 70501676 70501859 -32993115 - B3A SINE B2 -15 183 4 5 1122 528 16 0 0 chr15 70501860 70501921 -32993053 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 6 1122 441 0 0 0 chr15 70501923 70501972 -32993002 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1122 20058 68 1 2 chr15 70502008 70505388 -32989586 - L1Md_F2 LINE L1 0 6582 3207 8 1122 222 37 0 0 chr15 70505685 70505712 -32989262 + (CA)n Simple_repeat Simple_repeat 2 28 0 9 1122 1308 160 43 36 chr15 70506407 70506686 -32988288 - L1Md_T LINE L1 0 6582 6302 1 1122 368 308 118 67 chr15 70507670 70507924 -32987050 - MLT1A0 LTR MaLR -95 270 4 1 1122 663 352 72 53 chr15 70508926 70509301 -32985673 + MLT1B LTR MaLR 1 382 -8 1 1122 185 65 32 0 chr15 70510962 70510993 -32983981 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1 1122 256 381 87 69 chr15 70511080 70511356 -32983618 - B4 SINE B4 -11 281 1 1 1122 24 32 0 0 chr15 70512190 70512221 -32982753 + AT_rich Low_complexity Low_complexity 1 31 0 1 1122 1275 247 115 20 chr15 70512281 70512681 -32982293 + Lx7 LINE L1 6806 7243 -453 1 1122 5646 153 39 5 chr15 70512702 70513974 -32981000 - Lx LINE L1 -5 6649 5318 1 1122 413 297 54 0 chr15 70513962 70514110 -32980864 + Lx7 LINE L1 7235 7390 -306 1 1122 27 49 0 0 chr15 70514119 70514160 -32980814 + AT_rich Low_complexity Low_complexity 1 41 0 1 1122 1064 209 49 25 chr15 70514177 70514462 -32980512 + Lx7 LINE L1 7367 7658 -38 1 1122 1180 112 0 6 chr15 70515201 70515381 -32979593 - L1_Mus1 LINE L1 0 6567 6389 1 1122 2209 92 0 0 chr15 70515381 70515675 -32979299 + L1_Mus1 LINE L1 6069 6362 -205 1 1122 319 270 43 7 chr15 70515889 70516027 -32978947 - Lx9 LINE L1 -26 7618 7476 2 1122 287 252 15 22 chr15 70516027 70516161 -32978813 + (TTATA)n Simple_repeat Simple_repeat 4 136 0 2 1122 411 21 0 0 chr15 70516165 70516213 -32978761 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1122 1744 217 47 0 chr15 70516213 70516572 -32978402 - Lx9 LINE L1 -228 7416 7041 2 1123 1403 228 39 87 chr15 70516891 70517304 -32977670 + RMER10B LTR ERVL 6 398 0 2 1123 1817 270 10 2 chr15 70518053 70518465 -32976509 + MTC LTR MaLR 7 421 0 2 1123 2682 229 35 53 chr15 70519841 70519904 -32975070 - L1_Mur3 LINE L1 -3738 2142 2080 2 1123 1215 44 0 0 chr15 70519904 70520062 -32974912 + (TGG)n Simple_repeat Simple_repeat 1 158 0 2 1123 2682 236 39 46 chr15 70520062 70521215 -32973759 - L1_Mur3 LINE L1 -3801 2079 887 2 1123 602 171 76 8 chr15 70521222 70521340 -32973634 - RMER13A LTR ERVK -734 126 1 2 1123 4306 121 25 42 chr15 70521531 70522292 -32972682 + RMER17A LTR ERVK 1 748 -3 2 1123 31 0 0 0 chr15 70522297 70522328 -32972646 + AT_rich Low_complexity Low_complexity 1 31 0 2 1123 1995 132 55 0 chr15 70522556 70522882 -32972092 + Lx2 LINE L1 6647 6990 -7 3 1123 6908 123 23 2 chr15 70523833 70524985 -32969989 - L1_Mus4 LINE L1 -3 6633 5456 3 1123 1047 77 7 7 chr15 70524985 70525128 -32969846 - B1_Mus1 SINE Alu -5 143 1 3 1123 3350 158 24 20 chr15 70525128 70525301 -32969673 - L1_Mus4 LINE L1 -428 5455 5288 3 1123 18944 12 0 0 chr15 70525295 70528159 -32966815 - L1Md_A LINE L1 -1 6581 3718 3 1123 15333 189 84 9 chr15 70528157 70529050 -32965924 - L1_Mur1 LINE L1 -596 5290 4406 3 1123 1581 100 114 11 chr15 70529050 70529322 -32965652 - L1Md_F2 LINE L1 0 6582 6283 3 1123 15333 189 84 9 chr15 70529322 70531922 -32963052 - L1_Mur1 LINE L1 -1481 4405 1536 3 1123 1801 99 19 3 chr15 70531926 70532213 -32962761 - L1_Mus2 LINE L1 -659 5923 5641 3 1123 1076 91 0 7 chr15 70532180 70532335 -32962639 - L1VL4 LINE L1 -5542 760 607 3 1123 372 434 44 6 chr15 70533682 70534000 -32960974 - LTR16C LTR ERVL -5 484 155 3 1123 199 241 16 49 chr15 70534267 70534328 -32960646 + L2c LINE L2 3286 3344 -43 3 1123 836 205 124 10 chr15 70534666 70534868 -32960106 + URR1B DNA MER1_type 1 225 0 4 1123 1415 241 64 8 chr15 70536561 70536934 -32958040 - ORR1B1 LTR MaLR 0 394 1 4 1123 186 289 99 40 chr15 70538710 70538811 -32956163 - L2 LINE L2 -570 2849 2743 4 1123 1048 296 48 30 chr15 70539085 70539479 -32955495 + Lx8 LINE L1 6929 7329 -144 4 1123 21 0 0 0 chr15 70539816 70539837 -32955137 + AT_rich Low_complexity Low_complexity 1 21 0 4 1123 190 56 56 0 chr15 70539837 70539873 -32955101 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1123 357 310 50 0 chr15 70539903 70540003 -32954971 - B3 SINE B2 -57 159 55 4 1123 519 17 0 0 chr15 70540092 70540152 -32954822 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1123 55 83 0 0 chr15 70540293 70540425 -32954549 + AT_rich Low_complexity Low_complexity 1 132 0 4 1123 777 207 0 0 chr15 70540436 70540571 -32954403 + B1_Mus2 SINE Alu 6 140 -7 4 1123 225 65 0 0 chr15 70540571 70540602 -32954372 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 5 1123 419 287 105 112 chr15 70542295 70542581 -32952393 - MER67D LTR ERV1 -207 307 24 5 1123 279 114 0 0 chr15 70543133 70543177 -32951797 + (CAG)n Simple_repeat Simple_repeat 2 45 0 5 1123 318 252 36 2 chr15 70543226 70543360 -32951614 + Lx7 LINE L1 7568 7666 -30 5 1123 583 344 116 12 chr15 70544933 70545296 -32949678 + MLT2B1 LTR ERVL 8 503 -64 5 1123 22 56 0 0 chr15 70546009 70546045 -32948929 + AT_rich Low_complexity Low_complexity 1 36 0 5 1123 315 0 0 0 chr15 70546104 70546139 -32948835 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1123 456 19 0 0 chr15 70546139 70546191 -32948783 + (TA)n Simple_repeat Simple_repeat 1 53 0 5 1123 216 182 0 0 chr15 70546191 70546235 -32948739 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1123 22 56 0 0 chr15 70546835 70546871 -32948103 + AT_rich Low_complexity Low_complexity 1 36 0 5 1123 570 29 0 0 chr15 70546907 70546975 -32947999 + (TG)n Simple_repeat Simple_repeat 2 69 0 6 1123 576 106 0 0 chr15 70547928 70548013 -32946961 + (TA)n Simple_repeat Simple_repeat 1 85 0 6 1123 1530 238 10 113 chr15 70549723 70550432 -32944542 + Lx7 LINE L1 5389 5999 -1697 6 1123 236 125 71 0 chr15 70550691 70550747 -32944227 + A-rich Low_complexity Low_complexity 2 61 0 6 1123 380 292 188 34 chr15 70551240 70551276 -32943698 - MLT2B3 LTR ERVL -278 276 241 6 1123 513 58 0 0 chr15 70551276 70551345 -32943629 + (GA)n Simple_repeat Simple_repeat 2 70 0 6 1123 380 292 188 34 chr15 70551345 70551542 -32943432 - MLT2B3 LTR ERVL -314 240 9 6 1123 585 42 0 0 chr15 70551840 70551912 -32943062 + (TC)n Simple_repeat Simple_repeat 1 72 0 6 1123 324 212 174 6 chr15 70551914 70552075 -32942899 - Lx7 LINE L1 -119 7577 7390 6 1123 180 0 0 0 chr15 70552075 70552095 -32942879 + (TA)n Simple_repeat Simple_repeat 1 20 0 6 1123 189 0 0 0 chr15 70552095 70552115 -32942859 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 1123 35 24 0 0 chr15 70552176 70552218 -32942756 + AT_rich Low_complexity Low_complexity 1 42 0 7 1123 1358 254 20 14 chr15 70552239 70552590 -32942384 - Lx7 LINE L1 -357 7339 6987 6 1123 538 274 96 10 chr15 70553108 70553307 -32941667 + B3 SINE B2 1 216 0 7 1123 1137 75 0 0 chr15 70554136 70554283 -32940691 + B1_Mus2 SINE Alu 1 147 0 7 1123 870 228 118 50 chr15 70555172 70555644 -32939330 - RMER20B LTR ERVK -114 513 10 7 1123 1487 275 18 10 chr15 70555650 70556039 -32938935 + Lx8 LINE L1 6401 6792 -681 7 1123 21 0 0 0 chr15 70556443 70556464 -32938510 + AT_rich Low_complexity Low_complexity 1 21 0 7 1123 446 305 142 59 chr15 70556743 70557067 -32937907 + ORR1E LTR MaLR 5 355 -4 7 1123 533 269 1 156 chr15 70559407 70559582 -32935392 - RMER1B Other Other -477 589 354 7 1123 1059 247 47 67 chr15 70559588 70559951 -32935023 + RMER1B Other Other 17 707 -359 7 1123 3602 90 2 105 chr15 70559944 70560564 -32934410 - L1_Mus1 LINE L1 -254 6313 5758 7 1123 2661 67 50 0 chr15 70560564 70560923 -32934051 + L1_Mus1 LINE L1 6189 6565 -2 8 1123 4224 123 49 23 chr15 70561379 70562241 -32932733 - L1_Mus3 LINE L1 -5 6633 5686 8 1123 22 35 0 0 chr15 70562315 70562344 -32932630 + AT_rich Low_complexity Low_complexity 1 29 0 8 1123 398 79 0 16 chr15 70563071 70563135 -32931839 + (TAGA)n Simple_repeat Simple_repeat 2 64 0 8 1123 269 193 25 50 chr15 70563136 70563256 -32931718 + (TA)n Simple_repeat Simple_repeat 2 118 0 8 1123 605 14 14 0 chr15 70563261 70563335 -32931639 + (GA)n Simple_repeat Simple_repeat 2 76 0 8 1123 6872 131 18 7 chr15 70563501 70564298 -32930676 + Lx LINE L1 5519 6326 -328 8 1123 1153 176 124 89 chr15 70564298 70564678 -32930296 + RLTR9C LTR ERVK 1 393 0 8 1123 6872 129 18 8 chr15 70564678 70564997 -32929977 + Lx LINE L1 6327 6646 -8 8 1123 1554 54 0 0 chr15 70565422 70565627 -32929347 - L1Md_F2 LINE L1 -2 6580 6376 8 1123 216 135 0 0 chr15 70565825 70565862 -32929112 + (A)n Simple_repeat Simple_repeat 1 37 0 8 1123 2653 223 79 28 chr15 70565936 70566583 -32928391 + Lx5 LINE L1 6368 7047 -3 9 1123 268 281 41 0 chr15 70566789 70566935 -32928039 + (TA)n Simple_repeat Simple_repeat 2 153 0 9 1123 2295 122 23 23 chr15 70567102 70567498 -32927476 - Lx3A LINE L1 -1 6980 6585 9 1123 2172 324 85 18 chr15 70567500 70567517 -32927457 - Lx8 LINE L1 -127 7346 7330 9 1123 225 0 0 0 chr15 70567517 70567542 -32927432 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 9 1123 2172 324 85 18 chr15 70567542 70568452 -32926522 - Lx8 LINE L1 -144 7329 6357 9 1123 931 180 12 0 chr15 70568510 70568677 -32926297 - URR1A DNA MER1_type 0 226 58 9 1123 923 286 59 32 chr15 70568825 70569349 -32925625 + L1MC LINE L1 4697 5234 -912 9 1123 314 338 150 52 chr15 70569546 70569992 -32924982 + L1ME1 LINE L1 5409 5898 -281 9 1123 228 35 0 0 chr15 70570201 70570230 -32924744 + (TG)n Simple_repeat Simple_repeat 1 29 0 9 1123 2163 113 3 58 chr15 70570623 70570969 -32924005 + ORR1A2 LTR MaLR 1 327 0 9 1123 24 0 0 0 chr15 70571332 70571356 -32923618 + AT_rich Low_complexity Low_complexity 1 24 0 1 1123 1427 189 92 102 chr15 70571645 70572016 -32922958 - ORR1B2 LTR MaLR 0 367 1 1 1123 3570 197 26 46 chr15 70572016 70572605 -32922369 - ORR1B2-int LTR MaLR 0 1509 936 1 1123 387 0 0 0 chr15 70572605 70572648 -32922326 + (GTTTG)n Simple_repeat Simple_repeat 1 43 0 1 1123 3570 197 26 46 chr15 70572648 70572863 -32922111 - ORR1B2-int LTR MaLR -574 935 721 1 1123 1035 282 90 10 chr15 70572976 70573277 -32921697 + MTD LTR MaLR 93 417 -2 1 1123 773 316 114 19 chr15 70573307 70573675 -32921299 + RMER5 LTR ERV1 132 534 0 1 1123 218 323 51 36 chr15 70574818 70574956 -32920018 + MIRc SINE MIR 2 141 -127 1 1123 527 248 40 20 chr15 70575154 70575170 -32919804 - RSINE1 SINE B4 -10 155 141 1 1123 297 0 0 0 chr15 70575170 70575203 -32919771 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 1123 531 56 0 0 chr15 70575203 70575273 -32919701 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 1123 527 248 40 20 chr15 70575273 70575403 -32919571 - RSINE1 SINE B4 -25 140 6 1 1123 265 369 27 34 chr15 70575713 70575859 -32919115 + MER74B LTR ERVL 12 156 -402 1 1123 267 302 151 35 chr15 70575876 70576075 -32918899 + MER74B LTR ERVL 266 487 -135 1 1123 841 254 171 31 chr15 70576073 70576366 -32918608 - MTD LTR MaLR -81 338 5 1 1123 231 257 68 68 chr15 70576489 70576606 -32918368 + RMER19A LTR ERVK 597 713 -24 1 1123 390 108 0 0 chr15 70576822 70576887 -32918087 + (CTA)n Simple_repeat Simple_repeat 2 66 0 1 1123 294 268 0 66 chr15 70576892 70576968 -32918006 - ID4 SINE ID -11 72 2 1 1123 301 220 50 50 chr15 70578147 70578286 -32916688 + RMER17B LTR ERVK 321 459 -499 1 1123 225 0 0 0 chr15 70578302 70578327 -32916647 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 1123 354 23 0 0 chr15 70578468 70578511 -32916463 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1123 232 171 14 41 chr15 70579895 70579968 -32915006 + (CACCAT)n Simple_repeat Simple_repeat 4 74 0 1 1123 970 267 88 19 chr15 70581034 70581397 -32913577 - Lx6 LINE L1 0 7460 7073 1 1123 249 307 117 36 chr15 70581658 70581854 -32913120 - L1MDa LINE L1 -3574 2963 2752 1 1123 1107 82 7 0 chr15 70581872 70582018 -32912956 - B1_Mm SINE Alu 0 147 1 1 1123 441 329 99 61 chr15 70582223 70582831 -32912143 - L1MDa LINE L1 -4140 2493 1863 1 1123 589 320 44 41 chr15 70582842 70583230 -32911744 - L1MDa LINE L1 -5376 1257 869 1 1123 245 365 19 9 chr15 70584979 70585084 -32909890 + B1F SINE Alu 35 140 -9 1 1123 315 0 0 0 chr15 70585085 70585120 -32909854 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1 1123 1286 189 32 29 chr15 70585153 70585431 -32909543 - Lx9 LINE L1 -465 7179 6901 1 1123 1476 234 95 0 chr15 70585429 70585839 -32909135 + Lx9 LINE L1 7196 7644 0 1 1123 543 342 42 16 chr15 70585898 70586091 -32908883 + B4 SINE B4 82 279 -13 1 1123 573 76 0 0 chr15 70586126 70586205 -32908769 + (CA)n Simple_repeat Simple_repeat 2 80 0 1 1123 447 63 0 0 chr15 70586525 70586588 -32908386 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1123 589 311 9 1 chr15 70587083 70587268 -32907706 - B3A SINE B2 -9 207 19 1 1123 482 79 13 0 chr15 70587839 70587915 -32907059 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 1123 599 315 46 49 chr15 70589288 70589638 -32905336 + Lx8 LINE L1 6067 6415 -1058 1 1123 1440 338 43 5 chr15 70589652 70590215 -32904759 + Lx8 LINE L1 6599 7182 -291 1 1123 402 347 35 22 chr15 70590389 70590616 -32904358 + Lx8 LINE L1 6291 6520 -953 1 1123 902 310 77 20 chr15 70590680 70591072 -32903902 + Lx8 LINE L1 6740 7153 -320 1 1123 2131 155 0 3 chr15 70591196 70591539 -32903435 + ORR1A1 LTR MaLR 1 342 -4 1 1123 9216 168 49 6 chr15 70591543 70593328 -32901646 + ORR1A1-int LTR MaLR 1 1830 -133 1 1123 237 331 41 68 chr15 70593264 70593410 -32901564 + MT2A LTR ERVL 323 464 -69 1 1123 1156 96 11 0 chr15 70593429 70593606 -32901368 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 1 1123 455 33 16 0 chr15 70593613 70593674 -32901300 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 1123 312 27 0 0 chr15 70595276 70595313 -32899661 + (CAAT)n Simple_repeat Simple_repeat 1 37 0 1 1123 180 158 0 0 chr15 70595480 70595518 -32899456 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1123 357 237 110 70 chr15 70595558 70595658 -32899316 + B1F1 SINE Alu 21 124 -25 1 1123 398 306 0 0 chr15 70595682 70595790 -32899184 + GA-rich Low_complexity Low_complexity 4 111 0 1 1123 291 214 0 0 chr15 70595792 70595862 -32899112 + G-rich Low_complexity Low_complexity 4 73 0 1 1123 2737 276 77 38 chr15 70595995 70597912 -32897062 - Lx9 LINE L1 -955 6689 4598 1 1123 249 108 0 0 chr15 70597912 70597949 -32897025 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1123 1821 309 83 48 chr15 70597949 70598093 -32896881 - Lx9 LINE L1 -1283 4597 4479 1 1123 243 0 0 0 chr15 70598093 70598120 -32896854 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 1 1123 2991 48 5 0 chr15 70598124 70598500 -32896474 - L1Md_F3 LINE L1 0 6584 6207 1 1123 3347 137 12 30 chr15 70598498 70598828 -32896146 - Lx2 LINE L1 -5 6992 6668 1 1123 1593 42 0 0 chr15 70598828 70599017 -32895957 + B2_Mm1a SINE B2 2 190 -3 1 1123 3347 137 12 30 chr15 70599017 70599244 -32895730 - Lx2 LINE L1 -330 6667 6445 1 1123 1821 291 49 43 chr15 70599244 70599414 -32895560 - Lx9 LINE L1 -1402 4478 4305 1 1123 586 262 251 120 chr15 70599420 70599897 -32895077 + MT2B LTR ERVL 2 540 -61 1 1123 525 313 17 29 chr15 70599910 70600150 -32894824 - Lx9 LINE L1 -1690 4157 3921 1 1123 1144 284 142 29 chr15 70600152 70600735 -32894239 + Lx9 LINE L1 6815 7463 -181 1 1123 585 28 0 0 chr15 70600735 70600806 -32894168 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 1123 3510 77 4 4 chr15 70601979 70602450 -32892524 - L1Md_F2 LINE L1 -14 6568 6098 1 1123 248 371 58 33 chr15 70603573 70603693 -32891281 + MLT1D LTR MaLR 1 123 -382 1 1123 231 36 0 0 chr15 70603841 70603869 -32891105 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1 1123 939 300 50 0 chr15 70604221 70604544 -32890430 + Lx8 LINE L1 7133 7471 -2 1 1123 295 236 113 75 chr15 70604555 70604688 -32890286 + Lx8 LINE L1 7334 7471 -2 1 1123 2148 124 6 17 chr15 70606558 70606903 -32888071 + L1_Mus3 LINE L1 6292 6632 -6 1 1123 25 31 0 0 chr15 70606932 70606964 -32888010 + AT_rich Low_complexity Low_complexity 1 32 0 1 1123 29 0 0 25 chr15 70607053 70607081 -32887893 + AT_rich Low_complexity Low_complexity 1 28 0 1 1123 2957 49 0 19 chr15 70607081 70607458 -32887516 - L1_Mus1 LINE L1 -1 6566 6197 1 1123 29 0 0 25 chr15 70607458 70607469 -32887505 + AT_rich Low_complexity Low_complexity 1 11 0 1 1123 239 349 16 93 chr15 70607887 70608070 -32886904 - ORR1E LTR MaLR -127 232 64 1 1123 854 307 14 34 chr15 70608336 70608629 -32886345 + B4 SINE B4 5 291 -1 1 1123 192 97 0 0 chr15 70609008 70609039 -32885935 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1123 1146 178 19 0 chr15 70609405 70609613 -32885361 - BGLII_B LTR ERVK 0 441 230 1 1123 279 221 33 55 chr15 70610142 70610233 -32884741 + PB1D9 SINE Alu 27 115 -5 1 1123 254 378 52 42 chr15 70610672 70610885 -32884089 - ID_B1 SINE B4 -8 216 2 1 1123 694 332 41 22 chr15 70610956 70611227 -32883747 + MTD LTR MaLR 130 405 -14 1 1123 396 0 0 0 chr15 70611565 70611609 -32883365 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1123 360 0 0 0 chr15 70613294 70613334 -32881640 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 1 1123 231 286 60 125 chr15 70613669 70613763 -32881211 - MT2A LTR ERVL -3 581 495 1 1123 407 19 0 19 chr15 70613763 70613816 -32881158 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1123 616 284 85 51 chr15 70613816 70614207 -32880767 - MT2A LTR ERVL -90 511 3 1 1123 1437 69 0 21 chr15 70615582 70615775 -32879199 + B2_Mm1t SINE B2 2 190 -3 1 1123 954 122 0 0 chr15 70616669 70616817 -32878157 + (TTCC)n Simple_repeat Simple_repeat 4 151 0 1 1123 216 135 0 0 chr15 70616879 70616916 -32878058 + (TTCC)n Simple_repeat Simple_repeat 3 39 0 1 1123 612 301 5 41 chr15 70618609 70618806 -32876168 - B3A SINE B2 -6 192 3 1 1123 200 328 16 0 chr15 70620515 70620579 -32874395 + L3 LINE CR1 4023 4087 -402 1 1123 1163 167 61 9 chr15 70621432 70621644 -32873330 - URR1A DNA MER1_type -1 225 3 1 1123 553 316 104 28 chr15 70621698 70621957 -32873017 - MTD LTR MaLR -20 399 108 1 1123 292 316 25 12 chr15 70622056 70622136 -32872838 - B1F2 SINE Alu -68 81 1 1 1123 485 32 0 16 chr15 70622412 70622476 -32872498 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 1123 23 0 0 0 chr15 70622540 70622563 -32872411 + AT_rich Low_complexity Low_complexity 1 23 0 1 1123 189 0 0 0 chr15 70622831 70622852 -32872122 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 1123 763 262 71 0 chr15 70624330 70624513 -32870461 - B3 SINE B2 -11 205 10 1 1123 249 247 13 64 chr15 70625871 70625949 -32869025 - ID2 SINE ID -4 79 6 1 1123 651 297 72 91 chr15 70627644 70628007 -32866967 + MLT1A LTR MaLR 19 374 0 1 1123 389 250 0 28 chr15 70628007 70628111 -32866863 + MER106B DNA MER1_type 958 1058 -1 1 1123 321 325 72 41 chr15 70629700 70629921 -32865053 + MLT2D LTR ERVL 54 281 -133 1 1123 1191 244 81 21 chr15 70630346 70630631 -32864343 + MT2A LTR ERVL 1 302 -231 1 1123 45 0 0 0 chr15 70631050 70631095 -32863879 + AT_rich Low_complexity Low_complexity 1 45 0 1 1123 696 89 0 0 chr15 70631167 70631279 -32863695 - L1Md_T LINE L1 -1 6581 6470 1 1123 264 30 0 0 chr15 70632543 70632576 -32862398 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1123 239 318 100 27 chr15 70632728 70632838 -32862136 - Lx8 LINE L1 -166 7307 7190 1 1123 2514 110 3 0 chr15 70632991 70633363 -32861611 + L1_Mus3 LINE L1 6011 6383 -255 1 1123 3303 152 14 9 chr15 70633358 70633916 -32861058 + Lx2A LINE L1 6416 6976 -32 1 1123 349 154 0 25 chr15 70633916 70633996 -32860978 + Lx2A LINE L1 6930 7007 -1 1 1123 204 97 0 0 chr15 70635577 70635608 -32859366 + (TAAAA)n Simple_repeat Simple_repeat 5 35 0 1 1123 508 294 120 26 chr15 70637733 70637925 -32857049 - B3 SINE B2 -1 215 6 1 1123 325 345 86 71 chr15 70638339 70638875 -32856099 + L1M4 LINE L1 4127 4670 -1476 1 1123 255 315 0 0 chr15 70639206 70639260 -32855714 + RSINE1 SINE B4 111 164 -1 1 1123 408 40 0 0 chr15 70639263 70639313 -32855661 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1123 4709 66 23 2 chr15 70639491 70640102 -32854872 - L1Md_F2 LINE L1 -19 6563 5940 1 1123 1315 96 20 0 chr15 70640102 70640299 -32854675 + L1_Mm LINE L1 3850 4050 -1833 1 1123 253 292 14 14 chr15 70640441 70640514 -32854460 + Lx8 LINE L1 7256 7328 -145 2 1123 312 120 0 0 chr15 70640562 70640612 -32854362 + (CAGA)n Simple_repeat Simple_repeat 2 51 0 2 1123 459 52 0 0 chr15 70644353 70644411 -32850563 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1123 633 325 72 5 chr15 70644514 70644709 -32850265 - B4 SINE B4 -75 217 10 2 1123 951 164 31 11 chr15 70644882 70645073 -32849901 - Lx3_Mus LINE L1 0 7009 6815 2 1123 671 287 48 34 chr15 70645108 70645317 -32849657 - B3 SINE B2 -4 212 1 2 1123 538 104 0 0 chr15 70645379 70645456 -32849518 + Lx LINE L1 6037 6113 -541 2 1123 400 66 0 0 chr15 70645456 70645517 -32849457 + L1_Mus3 LINE L1 6574 6634 -4 2 1123 228 276 112 19 chr15 70645581 70645688 -32849286 - L1MC1 LINE L1 -114 6219 6103 2 1123 859 199 48 86 chr15 70646753 70647044 -32847930 + Lx7 LINE L1 7417 7696 0 2 1123 212 79 53 0 chr15 70647097 70647135 -32847839 + (TAAAA)n Simple_repeat Simple_repeat 4 43 0 2 1123 342 0 0 0 chr15 70647599 70647637 -32847337 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1124 819 97 145 0 chr15 70648200 70648324 -32846650 + B1_Mus1 SINE Alu 2 143 -5 2 1124 1021 189 13 39 chr15 70648330 70648561 -32846413 - Lx7 LINE L1 -16 7680 7456 2 1124 24 53 0 0 chr15 70648909 70648947 -32846027 + AT_rich Low_complexity Low_complexity 1 38 0 2 1124 419 303 0 0 chr15 70648957 70649079 -32845895 - Lx9 LINE L1 -677 6967 6846 2 1124 3662 176 12 3 chr15 70649091 70649764 -32845210 - L1_Mur2 LINE L1 -298 5579 4901 2 1124 2124 154 41 8 chr15 70649786 70650178 -32844796 + Lx2 LINE L1 5393 5797 -86 2 1124 1074 105 0 0 chr15 70650178 70650321 -32844653 + B1_Mus2 SINE Alu 2 144 -3 2 1124 273 75 0 0 chr15 70650321 70650361 -32844613 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 2 1124 1169 128 51 80 chr15 70650361 70650394 -32844580 + Lx2 LINE L1 5797 5815 -1182 2 1124 4532 108 15 3 chr15 70650411 70651077 -32843897 - L1_Mm LINE L1 0 5883 5210 2 1124 1842 69 12 0 chr15 70651077 70651324 -32843650 + L1_Mus2 LINE L1 6317 6566 0 2 1124 1175 136 74 0 chr15 70651340 70651566 -32843408 + Lx2 LINE L1 5751 6008 -574 2 1124 4357 148 17 30 chr15 70651566 70652339 -32842635 + Lx2 LINE L1 6235 6997 0 2 1124 570 268 113 53 chr15 70652339 70652412 -32842562 + Lx2 LINE L1 6007 6068 -514 2 1124 237 167 0 48 chr15 70652882 70652945 -32842029 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 2 1124 225 159 0 0 chr15 70652976 70653020 -32841954 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1124 276 271 122 0 chr15 70653026 70653133 -32841841 + L1M5 LINE L1 5647 5766 -398 2 1124 247 315 32 21 chr15 70653860 70653954 -32841020 + B1F SINE Alu 3 97 -52 2 1124 871 164 0 12 chr15 70654000 70654173 -32840801 + GA-rich Low_complexity Low_complexity 3 173 0 2 1124 561 15 0 0 chr15 70654668 70654734 -32840240 + (TAA)n Simple_repeat Simple_repeat 2 67 0 2 1124 302 354 172 3 chr15 70654987 70655330 -32839644 - L1MC3 LINE L1 -61 7724 7324 2 1124 354 310 175 14 chr15 70655352 70655643 -32839331 + L1MA5 LINE L1 5893 6230 -70 2 1124 340 359 22 14 chr15 70656507 70656727 -32838247 + L1MB1 LINE L1 5790 6021 -147 2 1124 516 301 41 41 chr15 70657002 70657199 -32837775 + B3 SINE B2 1 197 -19 2 1124 4168 98 24 142 chr15 70657199 70658051 -32836923 - RMER17A LTR ERVK 0 751 1 2 1124 387 84 0 53 chr15 70658100 70658175 -32836799 - Lx2A LINE L1 -5 7003 6933 2 1124 470 208 0 0 chr15 70658176 70658272 -32836702 - Lx9 LINE L1 -13 7631 7536 2 1124 224 170 21 0 chr15 70660246 70660293 -32834681 - B1_Mur4 SINE Alu -100 50 3 2 1124 1675 102 33 22 chr15 70660480 70660750 -32834224 - L1Md_F2 LINE L1 -12 6570 6298 2 1124 22 0 0 0 chr15 70662931 70662953 -32832021 + AT_rich Low_complexity Low_complexity 1 22 0 2 1124 372 43 0 0 chr15 70663388 70663434 -32831540 + (CAAAAA)n Simple_repeat Simple_repeat 5 50 0 2 1124 24 49 0 47 chr15 70663573 70663637 -32831337 + AT_rich Low_complexity Low_complexity 1 61 0 2 1124 1070 118 0 6 chr15 70665785 70665956 -32829018 + (TTTC)n Simple_repeat Simple_repeat 4 173 0 2 1124 432 261 23 0 chr15 70667628 70667797 -32827177 - L1MA6 LINE L1 -409 5891 5648 2 1124 1081 314 48 13 chr15 70667825 70668303 -32826671 + Lx8 LINE L1 6974 7468 -5 2 1124 285 316 124 37 chr15 70668880 70669097 -32825877 + MIRb SINE MIR 9 244 -24 2 1124 357 200 35 12 chr15 70669438 70669524 -32825450 - ORR1D2 LTR MaLR -7 367 280 2 1124 763 325 43 11 chr15 70669628 70670001 -32824973 - Lx9 LINE L1 -206 7438 7054 2 1124 3267 172 0 16 chr15 70670341 70670918 -32824056 - Lx LINE L1 -1 6653 6086 2 1124 497 114 0 0 chr15 70670920 70670990 -32823984 + L1VL4 LINE L1 285 354 -5948 2 1124 1589 237 107 57 chr15 70671032 70671537 -32823437 + RLTR20B3 LTR ERVK 21 550 -27 2 1124 23 54 0 0 chr15 70672667 70672704 -32822270 + AT_rich Low_complexity Low_complexity 1 37 0 2 1124 343 349 29 36 chr15 70672744 70672881 -32822093 + ID_B1 SINE B4 81 216 -8 2 1124 396 0 0 0 chr15 70673656 70673700 -32821274 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 1124 264 56 0 0 chr15 70673700 70673731 -32821243 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1124 876 89 0 0 chr15 70673731 70673854 -32821120 + (CCA)n Simple_repeat Simple_repeat 3 125 0 2 1124 2268 211 17 22 chr15 70673902 70674363 -32820611 + MT2A LTR ERVL 1 459 -74 2 1124 318 148 37 0 chr15 70674378 70674432 -32820542 - HAL1-3A_ME LINE L1 -838 2020 1965 2 1124 2519 298 84 63 chr15 70674462 70675597 -32819377 - ORR1D2-int LTR MaLR -212 1158 1 2 1124 715 288 228 13 chr15 70675597 70675900 -32819074 - ORR1D2 LTR MaLR 0 370 3 2 1124 247 273 95 32 chr15 70676208 70676397 -32818577 + L1MC2 LINE L1 6115 6315 -29 2 1124 423 327 25 56 chr15 70677158 70677320 -32817654 - ORR1E LTR MaLR -194 165 9 2 1124 1003 279 106 21 chr15 70677714 70678054 -32816920 + ORR1D2 LTR MaLR 1 369 -1 2 1124 3528 184 37 16 chr15 70678349 70679018 -32815956 + Lx2B LINE L1 6314 6996 -4 2 1124 400 175 21 0 chr15 70679335 70679432 -32815542 + (TA)n Simple_repeat Simple_repeat 2 100 0 2 1124 1246 107 38 38 chr15 70679432 70679645 -32815329 + Lx2 LINE L1 6657 6869 -128 2 1124 841 152 6 17 chr15 70679669 70679850 -32815124 + (TA)n Simple_repeat Simple_repeat 2 180 0 2 1124 186 167 0 0 chr15 70679995 70680031 -32814943 + (TGAA)n Simple_repeat Simple_repeat 4 39 0 2 1124 195 69 0 0 chr15 70680646 70680675 -32814299 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1124 205 226 16 31 chr15 70680754 70680818 -32814156 + GA-rich Low_complexity Low_complexity 2 64 0 2 1124 853 316 10 31 chr15 70680910 70681204 -32813770 - ORR1D2 LTR MaLR -55 315 28 2 1124 259 300 21 43 chr15 70681268 70681362 -32813612 - PB1D9 SINE Alu -7 113 22 2 1124 297 100 0 0 chr15 70681446 70681496 -32813478 + (T)n Simple_repeat Simple_repeat 1 50 0 2 1124 36172 32 0 0 chr15 70681498 70687860 -32807114 - L1Md_T LINE L1 0 6585 126 2 1124 6319 128 21 29 chr15 70687861 70688984 -32805990 - Lx2 LINE L1 -20 6977 5863 2 1124 4486 140 84 16 chr15 70688985 70689822 -32805152 + RMER17A2 LTR ERVK 2 895 -11 2 1124 582 94 0 0 chr15 70689835 70689920 -32805054 - Lx2 LINE L1 -1129 5868 5784 2 1124 264 29 13 114 chr15 70689920 70689999 -32804975 + T-rich Low_complexity Low_complexity 3 73 0 2 1124 1090 89 0 7 chr15 70690001 70690148 -32804826 - B1_Mm SINE Alu 0 147 2 2 1124 2640 132 20 7 chr15 70690148 70690324 -32804650 - Lx2 LINE L1 -87 5796 5621 2 1124 329 43 0 21 chr15 70690324 70690372 -32804602 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 1124 2640 132 20 7 chr15 70690372 70690639 -32804335 - Lx2 LINE L1 -263 5620 5348 2 1124 2857 176 50 18 chr15 70690850 70691456 -32803518 - Lx4A LINE L1 -1 7057 6433 2 1124 22 80 0 0 chr15 70691531 70691581 -32803393 + AT_rich Low_complexity Low_complexity 1 50 0 2 1124 1058 110 0 12 chr15 70691632 70691821 -32803153 + L1Md_F2 LINE L1 6401 6582 0 2 1124 1044 92 35 0 chr15 70692011 70692152 -32802822 + B1_Mus2 SINE Alu 1 146 -1 2 1124 381 22 0 0 chr15 70692158 70692204 -32802770 + (CATA)n Simple_repeat Simple_repeat 2 47 0 2 1124 1900 208 80 15 chr15 70693049 70693439 -32801535 - MTC LTR MaLR 0 421 7 2 1124 588 352 49 54 chr15 70693577 70693887 -32801087 - MLT1D LTR MaLR -2 503 196 2 1124 1285 14 0 0 chr15 70693887 70694034 -32800940 - B1_Mm SINE Alu 0 147 1 2 1124 588 352 49 54 chr15 70694034 70694113 -32800861 - MLT1D LTR MaLR -310 195 117 2 1124 900 244 246 60 chr15 70694377 70694812 -32800162 - MT2A LTR ERVL -17 516 1 2 1124 252 334 175 41 chr15 70694889 70695204 -32799770 - ORR1E LTR MaLR 0 359 3 2 1124 1210 54 7 0 chr15 70695469 70695616 -32799358 - B1_Mus1 SINE Alu 0 148 1 2 1124 946 239 133 23 chr15 70697093 70697401 -32797573 + ORR1D2 LTR MaLR 1 342 -28 2 1124 290 352 23 81 chr15 70697419 70697592 -32797382 + ID_B1 SINE B4 54 216 -8 2 1124 579 273 64 40 chr15 70698436 70698638 -32796336 + B3 SINE B2 2 208 -8 2 1124 264 59 0 0 chr15 70698649 70698683 -32796291 + (CAGA)n Simple_repeat Simple_repeat 2 35 0 2 1124 643 152 85 13 chr15 70700105 70700258 -32794716 - Lx2B LINE L1 -9 6991 6828 2 1124 257 0 0 29 chr15 70700510 70700544 -32794430 + (TTTTG)n Simple_repeat Simple_repeat 4 36 0 2 1124 519 17 0 0 chr15 70701593 70701653 -32793321 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 2 1124 753 93 0 0 chr15 70702477 70702584 -32792390 + (GAAA)n Simple_repeat Simple_repeat 2 108 0 2 1124 3702 84 23 0 chr15 70703174 70703686 -32791288 + L1_Mus1 LINE L1 6044 6567 0 2 1124 1212 205 58 14 chr15 70703798 70704075 -32790899 + Lx5 LINE L1 6485 6773 -277 2 1124 1550 181 62 35 chr15 70704076 70704507 -32790467 + RMER17C LTR ERVK 16 439 -519 2 1124 2027 98 10 20 chr15 70704507 70704809 -32790165 - Lx3_Mus LINE L1 -8 7001 6703 2 1124 2696 95 5 0 chr15 70704809 70705199 -32789775 + L1_Mur1 LINE L1 5308 5699 -187 3 1124 991 179 68 61 chr15 70705230 70705509 -32789465 + Lx5 LINE L1 6769 7049 -1 2 1124 228 310 84 15 chr15 70705522 70705784 -32789190 + L1M2 LINE L1 2144 2423 -3720 3 1124 1968 207 80 128 chr15 70706411 70707077 -32787897 - RLTR40 LTR ERVK -19 798 165 3 1124 270 38 211 70 chr15 70707183 70707240 -32787734 - L1_Mm LINE L1 -372 5511 5447 3 1124 7204 47 1 6 chr15 70707238 70708169 -32786805 - L1Md_F2 LINE L1 0 6582 5657 3 1124 2108 175 2 0 chr15 70708169 70708574 -32786400 - Lx LINE L1 -440 5443 5038 3 1124 6716 115 11 10 chr15 70708574 70709715 -32785259 + Lx LINE L1 5492 6634 -20 3 1124 270 0 0 0 chr15 70709719 70709749 -32785225 + (GA)n Simple_repeat Simple_repeat 1 30 0 3 1124 208 266 108 15 chr15 70709943 70710008 -32784966 - L2 LINE L2 -1889 1530 1460 3 1124 1965 174 23 23 chr15 70711270 70711664 -32783310 - Lx2 LINE L1 -37 6960 6567 3 1124 25 0 0 0 chr15 70711731 70711756 -32783218 + AT_rich Low_complexity Low_complexity 1 25 0 3 1124 281 366 119 7 chr15 70711759 70711902 -32783072 + RSINE1 SINE B4 3 161 -4 3 1124 326 42 0 41 chr15 70711935 70711984 -32782990 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 3 1124 26 50 0 0 chr15 70712123 70712163 -32782811 + AT_rich Low_complexity Low_complexity 1 40 0 3 1124 249 33 0 0 chr15 70713623 70713653 -32781321 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 3 1124 1334 259 62 3 chr15 70715720 70716072 -32778902 + Lx6 LINE L1 7042 7414 -46 3 1124 37 23 0 0 chr15 70716078 70716122 -32778852 + AT_rich Low_complexity Low_complexity 1 44 0 3 1124 6872 36 2 0 chr15 70716754 70717566 -32777408 + L1Md_T LINE L1 5768 6581 -1 3 1124 26 30 0 0 chr15 70717604 70717637 -32777337 + AT_rich Low_complexity Low_complexity 1 33 0 3 1124 3110 111 26 24 chr15 70717888 70718432 -32776542 + Lx3B LINE L1 5938 6482 -491 3 1124 2831 76 5 8 chr15 70718475 70718860 -32776114 - MTA_Mm LTR MaLR -8 388 5 3 1124 2924 112 4 62 chr15 70718860 70719374 -32775600 + Lx3B LINE L1 6490 6973 0 3 1124 212 171 0 0 chr15 70719374 70719415 -32775559 + A-rich Low_complexity Low_complexity 1 41 0 3 1124 226 234 0 0 chr15 70720345 70720392 -32774582 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1124 394 75 15 15 chr15 70720408 70720476 -32774498 + (TG)n Simple_repeat Simple_repeat 2 69 0 3 1124 3596 5 2 0 chr15 70720533 70720928 -32774046 + MTA_Mm LTR MaLR 1 396 0 3 1124 434 18 18 0 chr15 70722040 70722095 -32772879 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 1124 232 170 0 0 chr15 70722297 70722344 -32772630 + T-rich Low_complexity Low_complexity 1 47 0 3 1124 1071 95 0 13 chr15 70722344 70722494 -32772480 - B1_Mus1 SINE Alu 0 148 1 3 1124 607 25 0 24 chr15 70722500 70722583 -32772391 + (TTTC)n Simple_repeat Simple_repeat 4 84 0 3 1124 180 97 0 0 chr15 70722592 70722623 -32772351 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 3 1124 264 272 13 145 chr15 70722908 70723067 -32771907 + Charlie12 DNA MER1_type 37 174 -2699 3 1124 296 237 42 21 chr15 70723002 70723097 -32771877 - RMER30 DNA MER1_type -99 103 7 3 1124 344 351 69 0 chr15 70723488 70723619 -32771355 + ORR1E LTR MaLR 8 147 -212 3 1124 993 62 0 0 chr15 70724280 70724409 -32770565 + (GGGAGA)n Simple_repeat Simple_repeat 4 132 0 3 1124 25 0 0 0 chr15 70724409 70724434 -32770540 + AT_rich Low_complexity Low_complexity 1 25 0 3 1124 997 242 0 14 chr15 70724475 70724743 -32770231 - Lx2B LINE L1 -78 6980 6621 3 1124 556 347 73 38 chr15 70724744 70725088 -32769886 - MLT2D LTR ERVL -52 362 7 3 1124 909 140 0 0 chr15 70725114 70725264 -32769710 + (TA)n Simple_repeat Simple_repeat 2 151 0 3 1124 479 114 102 0 chr15 70725287 70725375 -32769599 - URR1B DNA MER1_type -43 182 86 3 1124 34132 51 1 15 chr15 70725448 70730703 -32764271 + L1Md_A LINE L1 413 5586 -297 3 1124 8483 26 4 0 chr15 70730703 70731694 -32763280 + L1Md_A LINE L1 5587 6581 -1 3 1124 185 368 61 55 chr15 70732040 70732221 -32762753 + MIRc SINE MIR 68 249 -19 3 1124 523 318 8 0 chr15 70733093 70733222 -32761752 - RSINE1 SINE B4 -35 130 1 3 1124 2158 312 98 12 chr15 70735450 70736465 -32758509 - Lx8 LINE L1 -5 7468 6367 3 1124 265 371 93 29 chr15 70738173 70738345 -32756629 - MLT1A LTR MaLR -2 372 190 3 1124 27 29 0 0 chr15 70738538 70738572 -32756402 + AT_rich Low_complexity Low_complexity 1 34 0 3 1124 958 305 95 19 chr15 70739083 70739618 -32755356 - Lx8 LINE L1 0 7473 6898 3 1124 425 50 17 0 chr15 70739640 70739700 -32755274 + (TTG)n Simple_repeat Simple_repeat 2 62 0 3 1124 261 57 0 0 chr15 70739756 70739791 -32755183 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 3 1124 260 284 0 73 chr15 70741180 70741290 -32753684 - Lx8 LINE L1 -916 6557 6456 3 1124 2459 143 46 52 chr15 70741290 70741823 -32753151 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1124 4729 64 9 18 chr15 70741825 70742499 -32752475 + IAPEz-int LTR ERVK 3 662 -5819 3 1124 429 65 0 31 chr15 70742499 70742563 -32752411 + IAPEz-int LTR ERVK 1359 1420 -5061 3 1124 1727 115 4 4 chr15 70742551 70742813 -32752161 + IAPEz-int LTR ERVK 2236 2497 -5183 3 1124 857 81 24 0 chr15 70742810 70742933 -32752041 + IAPEy-int LTR ERVK 4801 4926 -2587 3 1124 446 66 0 0 chr15 70742933 70742994 -32751980 + IAPEz-int LTR ERVK 3525 3585 -2896 3 1124 12858 9 1 0 chr15 70742986 70744470 -32750504 + IAPEz-int LTR ERVK 4117 5601 -880 3 1124 1905 142 50 55 chr15 70744470 70744886 -32750088 + IAPLTR2_Mm LTR ERVK 62 475 0 3 1124 2139 135 30 3 chr15 70744886 70745221 -32749753 - ORR1A1 LTR MaLR -2 344 1 3 1124 246 341 106 0 chr15 70745228 70745351 -32749623 - Lx8 LINE L1 -1109 6364 6229 3 1124 234 301 0 9 chr15 70746002 70746116 -32748858 + Lx9 LINE L1 7404 7516 -128 3 1124 249 285 46 11 chr15 70746111 70746285 -32748689 + Lx9 LINE L1 7458 7637 -7 3 1124 896 314 78 25 chr15 70746436 70746832 -32748142 + RMER5 LTR ERV1 52 468 -66 3 1124 366 23 0 0 chr15 70746918 70746961 -32748013 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 3 1124 530 54 14 0 chr15 70747750 70747824 -32747150 + (TC)n Simple_repeat Simple_repeat 2 76 0 3 1124 2419 193 39 0 chr15 70749418 70749951 -32745023 - Lx9 LINE L1 -176 7468 6915 3 1124 924 267 62 58 chr15 70749954 70750353 -32744621 - RMER16 LTR ERVK 0 533 6 3 1124 2156 272 80 12 chr15 70750438 70751122 -32743852 + Lx9 LINE L1 6161 6891 -753 3 1124 306 182 0 0 chr15 70752393 70752459 -32742515 + (TA)n Simple_repeat Simple_repeat 2 67 0 3 1124 429 326 62 47 chr15 70752891 70753084 -32741890 - B4A SINE B4 -75 217 22 3 1124 231 114 0 0 chr15 70753130 70753165 -32741809 + (TCTCCC)n Simple_repeat Simple_repeat 2 36 0 3 1124 351 0 0 0 chr15 70753174 70753213 -32741761 + (TTG)n Simple_repeat Simple_repeat 1 39 0 3 1124 896 132 7 0 chr15 70753213 70753365 -32741609 + (TTC)n Simple_repeat Simple_repeat 1 153 0 3 1124 609 14 0 0 chr15 70754767 70754837 -32740137 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 3 1124 22 0 0 0 chr15 70755109 70755131 -32739843 + AT_rich Low_complexity Low_complexity 1 22 0 3 1124 538 137 0 31 chr15 70755378 70755476 -32739498 + Lx4A LINE L1 6761 6855 -203 3 1124 21 0 0 0 chr15 70755528 70755549 -32739425 + AT_rich Low_complexity Low_complexity 1 21 0 3 1124 258 222 62 86 chr15 70755598 70755726 -32739248 - L1MEf LINE L1 -3207 2939 2815 3 1124 226 0 0 56 chr15 70755897 70755933 -32739041 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 1124 342 331 106 41 chr15 70755933 70756368 -32738606 - L1MEf LINE L1 -3574 2572 2110 3 1124 21 57 0 0 chr15 70756465 70756500 -32738474 + AT_rich Low_complexity Low_complexity 1 35 0 3 1124 2890 186 45 18 chr15 70756525 70757078 -32737896 - RMER15 LTR ERVL -5 570 3 3 1124 536 320 6 45 chr15 70757094 70757251 -32737723 - B3A SINE B2 -46 152 2 3 1124 266 317 9 38 chr15 70757633 70757738 -32737236 + PB1D7 SINE Alu 1 102 -18 3 1124 7628 47 0 0 chr15 70757772 70758913 -32736061 - L1Md_T LINE L1 0 6582 5442 3 1124 21 71 0 0 chr15 70759269 70759311 -32735663 + AT_rich Low_complexity Low_complexity 1 42 0 3 1124 373 325 12 60 chr15 70759392 70759525 -32735449 - RLTR14 LTR ERV1 0 382 254 3 1124 3112 58 2 30 chr15 70759525 70759932 -32735042 + MTA_Mm LTR MaLR 1 396 0 3 1124 373 325 12 60 chr15 70759932 70759965 -32735009 - RLTR14 LTR ERV1 -129 253 224 3 1124 395 329 46 79 chr15 70760386 70760546 -32734428 - L1MEf LINE L1 -5189 1053 897 3 1124 2560 108 3 6 chr15 70760546 70760908 -32734066 - L1_Mus1 LINE L1 0 6567 6207 3 1124 395 329 46 79 chr15 70760908 70761051 -32733923 - L1MEf LINE L1 -5346 896 760 3 1124 321 353 84 19 chr15 70761477 70761740 -32733234 - L1MEf LINE L1 -5493 749 470 3 1124 284 340 10 0 chr15 70762104 70762207 -32732767 + GA-rich Low_complexity Low_complexity 2 105 0 3 1124 198 0 0 0 chr15 70764087 70764109 -32730865 + (TTA)n Simple_repeat Simple_repeat 2 23 0 3 1124 440 267 70 20 chr15 70766467 70766666 -32728308 + RMER17C-int LTR ERVK 2658 2866 -372 3 1124 549 44 0 0 chr15 70766667 70766735 -32728239 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 3 1124 376 291 49 37 chr15 70766765 70767065 -32727909 + RMER17C-int LTR ERVK 3031 3235 -3 3 1124 621 171 0 0 chr15 70767211 70767381 -32727593 + CT-rich Low_complexity Low_complexity 1 170 0 3 1124 306 0 0 0 chr15 70767381 70767415 -32727559 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 1124 342 98 0 0 chr15 70768466 70768517 -32726457 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1124 370 211 40 40 chr15 70768947 70769095 -32725879 - Lx6 LINE L1 0 7460 7313 3 1124 275 245 123 91 chr15 70769351 70769571 -32725403 + MER97c DNA MER1_type? 514 740 -350 3 1124 231 103 0 0 chr15 70769630 70769669 -32725305 + (A)n Simple_repeat Simple_repeat 1 39 0 3 1124 181 403 64 7 chr15 70770188 70770328 -32724646 - MIRb SINE MIR -118 150 3 3 1124 270 81 0 0 chr15 70770579 70770616 -32724358 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 3 1124 514 294 48 7 chr15 70771143 70771290 -32723684 + RSINE1 SINE B4 3 155 -10 3 1124 23 54 0 0 chr15 70771319 70771356 -32723618 + AT_rich Low_complexity Low_complexity 1 37 0 3 1124 945 108 0 0 chr15 70771389 70771519 -32723455 + B1_Mus1 SINE Alu 9 138 -10 3 1124 261 0 0 0 chr15 70771519 70771548 -32723426 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3 1124 337 288 9 26 chr15 70772565 70772679 -32722295 + CT-rich Low_complexity Low_complexity 1 112 0 3 1124 1100 215 19 55 chr15 70772848 70773158 -32721816 + RMER17C LTR ERVK 1 299 -111 3 1124 724 267 49 12 chr15 70773331 70773574 -32721400 + Lx8 LINE L1 6426 6677 -796 3 1124 255 305 69 59 chr15 70773607 70773708 -32721266 + MT2B LTR ERVL 158 259 -342 3 1124 343 289 100 0 chr15 70773622 70773712 -32721262 + B1_Mur1 SINE Alu 12 110 -39 3 1124 456 19 0 0 chr15 70773721 70773774 -32721200 + (TC)n Simple_repeat Simple_repeat 1 53 0 3 1124 425 327 100 29 chr15 70773901 70774071 -32720903 - B3 SINE B2 0 216 35 3 1124 264 287 54 27 chr15 70774220 70774285 -32720689 + Lx8 LINE L1 7272 7336 -137 3 1124 387 0 0 0 chr15 70774285 70774328 -32720646 + (TAA)n Simple_repeat Simple_repeat 3 45 0 4 1124 264 287 54 27 chr15 70774328 70774409 -32720565 + Lx8 LINE L1 7337 7422 -51 3 1124 21 36 0 0 chr15 70774485 70774513 -32720461 + AT_rich Low_complexity Low_complexity 1 28 0 4 1124 288 378 67 75 chr15 70775235 70775587 -32719387 - MTEb LTR MaLR -39 340 3 4 1124 966 324 49 13 chr15 70776055 70776505 -32718469 - Lx8 LINE L1 -766 6707 6242 4 1124 506 267 27 0 chr15 70776506 70776652 -32718322 + Lx8 LINE L1 6706 6855 -618 4 1124 240 35 0 0 chr15 70777083 70777112 -32717862 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 1124 1347 72 0 0 chr15 70777673 70777853 -32717121 + (GA)n Simple_repeat Simple_repeat 1 180 0 4 1124 1269 231 43 31 chr15 70778008 70778479 -32716495 + L1_Mur1 LINE L1 118 919 -6063 4 140 207 307 86 111 chr15 70778798 70778996 -32715978 - MIRc SINE MIR -52 216 24 4 1125 1589 32 0 0 chr15 70780432 70780617 -32714357 - B2_Mm1a SINE B2 -7 186 2 4 1125 549 80 0 0 chr15 70780707 70780782 -32714192 + (TA)n Simple_repeat Simple_repeat 1 75 0 4 1125 1601 160 169 22 chr15 70780801 70781121 -32713853 - ORR1C1 LTR MaLR -2 376 10 4 1125 407 284 65 80 chr15 70781370 70781695 -32713279 + RMER10A LTR ERVL 122 441 -1 4 1125 249 119 0 0 chr15 70782001 70782043 -32712931 + (CATA)n Simple_repeat Simple_repeat 2 43 0 4 1125 317 208 13 0 chr15 70782089 70782166 -32712808 + GA-rich Low_complexity Low_complexity 2 79 0 4 1125 192 158 0 0 chr15 70783871 70783909 -32711065 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1125 377 343 16 33 chr15 70783909 70784093 -32710881 - B3A SINE B2 -16 182 2 4 1125 3072 164 38 23 chr15 70785764 70785855 -32709119 - RLTR20D LTR ERVK 0 568 477 4 1125 387 0 0 0 chr15 70785855 70785898 -32709076 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1125 3072 164 38 23 chr15 70785898 70786366 -32708608 - RLTR20D LTR ERVK -92 476 3 4 1125 314 302 45 23 chr15 70786476 70786564 -32708410 - ORR1E LTR MaLR -227 132 43 4 1125 560 276 7 138 chr15 70786604 70786742 -32708232 - MTE-int LTR MaLR -76 1504 1393 4 1125 1032 129 12 0 chr15 70786742 70786913 -32708061 - Lx2 LINE L1 -5 6992 6820 4 1125 560 276 7 138 chr15 70786913 70787043 -32707931 - MTE-int LTR MaLR -188 1392 1271 4 1125 446 343 22 0 chr15 70787042 70787179 -32707795 + ID_B1 SINE B4 78 217 -7 4 1125 485 348 143 25 chr15 70787263 70787584 -32707390 - MTE-int LTR MaLR -398 1182 824 4 1125 423 385 119 23 chr15 70787754 70788267 -32706707 - MTE-int LTR MaLR -955 625 64 4 1125 25 31 0 0 chr15 70789252 70789284 -32705690 + AT_rich Low_complexity Low_complexity 1 32 0 4 1125 4311 138 35 28 chr15 70789609 70790577 -32704397 - L1_Mus3 LINE L1 -6 6632 5592 4 1125 518 341 5 77 chr15 70790912 70791106 -32703868 + B3A SINE B2 1 180 -18 4 1125 24 0 0 0 chr15 70791671 70791695 -32703279 + AT_rich Low_complexity Low_complexity 1 24 0 4 1125 281 77 0 37 chr15 70792128 70792182 -32702792 + (TTTTTG)n Simple_repeat Simple_repeat 3 54 0 4 1125 2243 107 0 9 chr15 70792424 70792746 -32702228 + ORR1A2 LTR MaLR 1 319 -8 4 1125 4946 91 7 1 chr15 70792983 70793662 -32701312 - L1Md_F2 LINE L1 -11 6571 5889 4 1125 2029 54 0 0 chr15 70793662 70793921 -32701053 - L1_Mm LINE L1 -85 5798 5540 4 1125 4976 112 34 2 chr15 70793921 70795460 -32699514 - L1Md_F LINE L1 -3913 1970 380 4 1125 3564 140 14 2 chr15 70795466 70796024 -32698950 - Lx3A LINE L1 -9 6972 6408 4 1125 481 130 0 52 chr15 70796024 70796121 -32698853 - Lx3A LINE L1 -977 6004 5913 4 1125 606 197 0 0 chr15 70796122 70796249 -32698725 + CT-rich Low_complexity Low_complexity 4 130 0 4 1125 534 155 0 0 chr15 70796249 70796352 -32698622 - Lx3_Mus LINE L1 -1080 5929 5827 4 1125 259 391 0 25 chr15 70797456 70797574 -32697400 + MLT1B LTR MaLR 18 132 -258 4 1125 318 286 0 12 chr15 70797606 70797769 -32697205 + GA-rich Low_complexity Low_complexity 1 160 0 4 1125 3989 234 42 81 chr15 70797795 70799095 -32695879 - Lx7 LINE L1 -127 7569 6321 4 1125 582 28 0 0 chr15 70799462 70799534 -32695440 + (TG)n Simple_repeat Simple_repeat 2 73 0 4 1125 1880 211 44 21 chr15 70799541 70799924 -32695050 + MTB_Mm LTR MaLR 8 399 -8 4 1125 27 0 0 0 chr15 70800767 70800794 -32694180 + AT_rich Low_complexity Low_complexity 1 27 0 4 1125 204 226 0 0 chr15 70801195 70801257 -32693717 + CT-rich Low_complexity Low_complexity 4 65 0 4 1125 498 33 0 0 chr15 70801259 70801319 -32693655 + (TC)n Simple_repeat Simple_repeat 2 61 0 4 1125 383 118 13 0 chr15 70802015 70802091 -32692883 + (TTTTG)n Simple_repeat Simple_repeat 1 77 0 4 1125 1389 38 0 0 chr15 70802106 70802316 -32692658 + (GTTTG)n Simple_repeat Simple_repeat 1 210 0 4 1125 706 234 51 0 chr15 70803170 70803307 -32691667 + B1_Mur1 SINE Alu 3 146 -3 4 1125 685 292 53 28 chr15 70803666 70803948 -32691026 - B4 SINE B4 -2 290 2 4 1125 281 371 121 0 chr15 70803955 70804071 -32690903 + Tigger5 DNA MER2_type 109 238 -2168 4 1125 857 307 83 22 chr15 70804597 70805007 -32689967 - Lx8 LINE L1 -941 6532 6098 4 1125 23 0 0 0 chr15 70805091 70805114 -32689860 + AT_rich Low_complexity Low_complexity 1 23 0 4 1125 538 269 108 22 chr15 70805800 70806042 -32688932 - Lx8 LINE L1 -491 7153 6761 4 1125 2165 181 32 7 chr15 70806045 70806375 -32688599 - MTC LTR MaLR 0 421 84 4 1125 3547 121 2 6 chr15 70806375 70806908 -32688066 + L1_Mus4 LINE L1 6106 6636 0 4 1125 2165 181 32 7 chr15 70806908 70806982 -32687992 - MTC LTR MaLR -338 83 9 4 1125 1043 286 76 39 chr15 70807003 70807465 -32687509 - Lx8 LINE L1 -730 6743 6265 4 1125 683 305 13 33 chr15 70807464 70807769 -32687205 + L1_Mur3 LINE L1 4941 5239 -641 4 1125 27 0 0 0 chr15 70807913 70807940 -32687034 + AT_rich Low_complexity Low_complexity 1 27 0 4 1125 345 82 0 0 chr15 70808608 70808657 -32686317 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1125 383 237 11 0 chr15 70808668 70808761 -32686213 - Lx9 LINE L1 -183 7461 7368 4 1125 2337 219 129 8 chr15 70808762 70809421 -32685553 + Lx9 LINE L1 6646 7384 -260 4 1125 266 308 18 18 chr15 70810238 70810347 -32684627 - L1MA4 LINE L1 -685 5627 5519 4 1125 435 267 51 51 chr15 70810343 70810560 -32684414 + L1MA4 LINE L1 5691 5907 -393 4 1125 1299 92 11 0 chr15 70810949 70811133 -32683841 + B2_Mm1a SINE B2 2 187 -6 4 1125 41 0 0 0 chr15 70811412 70811453 -32683521 + AT_rich Low_complexity Low_complexity 1 41 0 4 1125 338 190 230 0 chr15 70811631 70811731 -32683243 + Lx7 LINE L1 7574 7696 0 4 1125 1231 173 31 19 chr15 70812134 70812393 -32682581 + Lx3_Mus LINE L1 6747 7008 -1 4 1125 410 345 0 0 chr15 70812588 70812698 -32682276 - RSINE1 SINE B4 -47 118 9 4 1125 22 35 0 0 chr15 70813133 70813162 -32681812 + AT_rich Low_complexity Low_complexity 1 29 0 4 1125 414 0 0 0 chr15 70813817 70813863 -32681111 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1125 396 0 0 0 chr15 70814241 70814285 -32680689 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 1125 474 18 0 0 chr15 70814285 70814339 -32680635 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1125 2153 123 13 0 chr15 70814513 70814829 -32680145 + ORR1A2 LTR MaLR 8 327 0 4 1125 1133 71 0 7 chr15 70815330 70815472 -32679502 + B1_Mm SINE Alu 1 141 -6 4 1125 237 65 0 0 chr15 70815474 70815505 -32679469 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 4 1125 981 45 114 0 chr15 70815814 70815946 -32679028 - B1_Mus2 SINE Alu 0 147 1 4 1125 436 311 73 36 chr15 70816505 70816642 -32678332 + B3A SINE B2 1 142 -56 4 1125 1722 209 57 26 chr15 70816632 70817019 -32677955 - MTB_Mm LTR MaLR -8 399 1 4 1125 334 350 10 0 chr15 70817116 70817219 -32677755 - B3 SINE B2 -7 209 106 4 1125 410 229 0 9 chr15 70817840 70817950 -32677024 + Lx9 LINE L1 7383 7491 -153 4 1125 375 23 0 0 chr15 70818075 70818119 -32676855 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1125 22 56 0 0 chr15 70818189 70818225 -32676749 + AT_rich Low_complexity Low_complexity 1 36 0 4 1125 545 266 122 0 chr15 70820042 70820230 -32674744 + B3 SINE B2 1 211 -5 4 1125 31 26 0 0 chr15 70820250 70820288 -32674686 + AT_rich Low_complexity Low_complexity 1 38 0 4 1125 547 256 0 91 chr15 70820604 70820802 -32674172 - Lx5 LINE L1 -776 6274 6095 4 1125 311 318 93 55 chr15 70821424 70821607 -32673367 + MLT1C LTR MaLR 73 262 -205 4 1125 305 301 119 30 chr15 70822294 70822496 -32672478 - MLT2C2 LTR ERVL 0 464 245 4 1125 955 142 22 38 chr15 70822604 70822787 -32672187 - URR1A DNA MER1_type 0 226 47 4 1125 883 278 39 9 chr15 70822932 70823164 -32671810 - ORR1D2 LTR MaLR -8 362 124 4 1125 321 246 0 0 chr15 70823164 70823233 -32671741 - RMER17B LTR ERVK 0 958 890 4 1125 878 100 0 23 chr15 70823233 70823366 -32671608 - Lx LINE L1 -174 6480 6351 4 1125 283 305 83 30 chr15 70823632 70823764 -32671210 + Lx7 LINE L1 7117 7255 -441 4 1125 596 251 86 10 chr15 70824657 70824854 -32670120 - B3 SINE B2 -1 215 4 4 1125 612 286 121 62 chr15 70824857 70825229 -32669745 - Lx8 LINE L1 -2 7471 7078 4 1125 360 0 0 0 chr15 70826265 70826305 -32668669 + (T)n Simple_repeat Simple_repeat 1 40 0 4 1125 343 205 132 33 chr15 70826748 70826869 -32668105 + L1MCa LINE L1 1246 1378 -5130 4 1125 441 189 0 0 chr15 70826907 70827002 -32667972 + (TG)n Simple_repeat Simple_repeat 1 95 0 4 1125 357 24 0 0 chr15 70827351 70827393 -32667581 + (GA)n Simple_repeat Simple_repeat 2 43 0 4 1125 7715 46 1 3 chr15 70827618 70829143 -32665831 - L1Md_F2 LINE L1 0 6582 5108 4 1125 7291 68 12 0 chr15 70829141 70830244 -32664730 + L1_Mus1 LINE L1 5452 6567 0 4 1125 5057 152 72 9 chr15 70830461 70831356 -32663618 + RMER17B LTR ERVK 1 951 -7 4 1125 944 308 75 18 chr15 70831528 70831851 -32663123 + ORR1E LTR MaLR 1 343 -16 4 1125 3391 110 5 39 chr15 70831851 70832409 -32662565 + Lx LINE L1 6116 6654 0 4 1125 482 305 60 6 chr15 70833106 70833274 -32661700 + LTR82A LTR ERVL 144 320 -552 4 1125 600 62 0 0 chr15 70833647 70833728 -32661246 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 4 1125 726 12 0 0 chr15 70833772 70833855 -32661119 + (TG)n Simple_repeat Simple_repeat 2 84 0 4 1125 234 270 31 16 chr15 70833858 70833922 -32661052 - RSINE1 SINE B4 -25 140 76 5 1125 223 396 10 0 chr15 70834039 70834135 -32660839 - B4A SINE B4 -192 100 4 5 1125 294 29 0 0 chr15 70834147 70834182 -32660792 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 5 1125 687 25 0 0 chr15 70834402 70834483 -32660491 + (TTTTA)n Simple_repeat Simple_repeat 5 85 0 5 1125 1948 55 0 23 chr15 70835476 70835736 -32659238 + L1Md_F2 LINE L1 6329 6582 0 5 1125 1663 168 10 6 chr15 70835857 70836169 -32658805 - Lx2 LINE L1 0 6997 6685 5 1125 5050 140 5 18 chr15 70836169 70837007 -32657967 + Lx2 LINE L1 5633 6459 -538 5 1125 287 209 30 0 chr15 70837800 70837867 -32657107 + Lx9 LINE L1 7379 7447 -197 5 1125 1032 292 89 34 chr15 70838791 70838899 -32656075 - Lx8 LINE L1 -8 7465 7344 5 1125 450 0 0 0 chr15 70838899 70838949 -32656025 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1125 1032 292 89 34 chr15 70838949 70839280 -32655694 - Lx8 LINE L1 -130 7343 7002 5 1125 305 229 24 24 chr15 70839413 70839498 -32655476 - Lx8 LINE L1 -8 7465 7381 5 1125 355 392 42 14 chr15 70839645 70839857 -32655117 + MER58A DNA MER1_type 6 223 -1 5 1125 186 133 0 0 chr15 70840232 70840262 -32654712 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1125 237 228 10 115 chr15 70841177 70841281 -32653693 + MIR SINE MIR 163 255 -7 5 1125 230 53 0 123 chr15 70842620 70842685 -32652289 + (TCTCTG)n Simple_repeat Simple_repeat 4 60 0 5 1125 357 214 0 0 chr15 70842680 70842783 -32652191 + (TA)n Simple_repeat Simple_repeat 2 104 0 5 1125 324 338 15 27 chr15 70843028 70843245 -32651729 + GA-rich Low_complexity Low_complexity 1 214 0 5 1125 21 36 0 0 chr15 70843776 70843804 -32651170 + AT_rich Low_complexity Low_complexity 1 28 0 5 1125 234 105 0 0 chr15 70844843 70844881 -32650093 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1125 388 277 54 103 chr15 70845936 70846121 -32648853 + MLT1A1 LTR MaLR 221 396 -12 5 1125 632 290 41 55 chr15 70846709 70847001 -32647973 - Charlie20a DNA Charlie -364 443 156 5 1125 28 0 0 0 chr15 70848298 70848326 -32646648 + AT_rich Low_complexity Low_complexity 1 28 0 5 1125 736 361 31 20 chr15 70848375 70848731 -32646243 + MLT2B3 LTR ERVL 1 360 -194 5 1125 189 0 0 0 chr15 70848744 70848765 -32646209 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1125 195 42 0 0 chr15 70850338 70850362 -32644612 + (TCC)n Simple_repeat Simple_repeat 3 26 0 5 1125 639 71 0 0 chr15 70850386 70850471 -32644503 + (TC)n Simple_repeat Simple_repeat 1 85 0 5 1125 573 15 0 0 chr15 70850471 70850536 -32644438 + (TTCCC)n Simple_repeat Simple_repeat 2 67 0 5 1125 255 125 0 0 chr15 70850536 70850576 -32644398 + (TTTC)n Simple_repeat Simple_repeat 1 40 0 5 1125 654 178 14 56 chr15 70850576 70850719 -32644255 - B1_Mur3 SINE Alu 0 149 13 5 1125 564 77 0 0 chr15 70850732 70850810 -32644164 + (TCC)n Simple_repeat Simple_repeat 3 80 0 5 1125 1038 159 86 36 chr15 70850862 70851084 -32643890 + RMER6A LTR ERVK 36 268 -488 5 1125 1050 259 61 116 chr15 70852147 70852623 -32642351 + Lx7 LINE L1 6882 7331 -365 5 1125 270 297 44 18 chr15 70852690 70852803 -32642171 + Lx7 LINE L1 7563 7678 -18 5 1125 268 360 35 43 chr15 70853035 70853151 -32641823 - MER58A DNA MER1_type -85 139 25 5 1125 2205 273 31 23 chr15 70853211 70853766 -32641208 - Lx5 LINE L1 -6 7044 6486 5 1125 507 73 0 0 chr15 70853811 70853879 -32641095 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 5 1125 472 311 0 64 chr15 70853894 70854066 -32640908 + Lx6 LINE L1 7257 7417 -43 5 1125 231 326 10 30 chr15 70854469 70854570 -32640404 - MIRb SINE MIR -134 134 36 5 1125 45 19 0 0 chr15 70855147 70855199 -32639775 + AT_rich Low_complexity Low_complexity 1 52 0 5 1125 1802 65 4 47 chr15 70855201 70855459 -32639515 - L1_Mus2 LINE L1 -1 6565 6319 5 1125 24430 124 11 8 chr15 70855459 70855956 -32639018 - L1Md_F LINE L1 -651 5232 4738 5 1125 320 59 20 0 chr15 70855956 70856007 -32638967 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 5 1125 24430 124 11 8 chr15 70856007 70859448 -32635526 - L1Md_F LINE L1 -1146 4737 1291 5 1125 3037 25 0 0 chr15 70859448 70859802 -32635172 - L1Md_A LINE L1 -1 6581 6228 5 1125 24430 163 56 22 chr15 70859802 70859975 -32634999 - L1Md_F LINE L1 -4593 1290 1093 5 1125 2095 53 8 0 chr15 70859975 70860241 -32634733 + L1Md_F3 LINE L1 6315 6582 -2 5 1125 2667 201 84 29 chr15 70860241 70860863 -32634111 - L1Md_F LINE L1 -5524 1092 524 5 1125 281 171 24 0 chr15 70860969 70861051 -32633923 + (TCTCTG)n Simple_repeat Simple_repeat 2 85 0 5 1125 669 47 0 0 chr15 70861052 70861137 -32633837 + (TG)n Simple_repeat Simple_repeat 2 86 0 5 1125 1875 141 21 56 chr15 70861229 70861567 -32633407 - ORR1A3 LTR MaLR 0 326 1 5 1125 302 345 25 49 chr15 70861568 70861690 -32633284 - PB1D9 SINE Alu 0 120 2 5 1125 385 366 20 34 chr15 70862224 70862249 -32632725 - B4A SINE B4 -2 290 270 5 1125 504 0 0 0 chr15 70862249 70862305 -32632669 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1125 385 366 20 34 chr15 70862305 70862573 -32632401 - B4A SINE B4 -23 269 1 5 1125 342 0 0 0 chr15 70862645 70862683 -32632291 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1125 680 332 127 62 chr15 70863459 70864150 -32630824 + LTR68 LTR ERV1 3 738 -2 5 1125 227 323 65 0 chr15 70864540 70864633 -32630341 - L3 LINE CR1 -402 4087 3989 5 1125 265 367 92 0 chr15 70864853 70864962 -32630012 + PB1 SINE Alu 2 120 -7 5 1125 333 0 0 0 chr15 70865004 70865041 -32629933 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1125 1101 287 46 22 chr15 70865410 70865780 -32629194 + MTE2b LTR MaLR 1 379 0 5 1125 504 186 0 0 chr15 70866248 70866361 -32628613 + (TG)n Simple_repeat Simple_repeat 2 114 0 5 1125 450 0 0 0 chr15 70866361 70866411 -32628563 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1125 287 253 138 12 chr15 70866502 70866582 -32628392 - B3A SINE B2 -103 95 6 5 1125 1315 83 16 6 chr15 70867821 70868003 -32626971 + B2_Mm2 SINE B2 5 188 -7 5 1125 678 304 88 13 chr15 70868449 70868826 -32626148 + L1M2 LINE L1 4517 4921 -1222 5 1125 554 271 174 10 chr15 70868827 70869229 -32625745 - L1M2 LINE L1 -1634 4509 4042 5 1125 802 293 142 56 chr15 70871125 70871483 -32623491 - MTD LTR MaLR -14 405 17 5 1125 486 83 0 0 chr15 70871995 70872067 -32622907 + (TA)n Simple_repeat Simple_repeat 1 72 0 5 1125 1390 275 153 24 chr15 70872085 70872700 -32622274 - Lx9 LINE L1 -209 7435 6742 5 1125 289 336 115 60 chr15 70872978 70873212 -32621762 - MLT1F1 LTR MaLR -10 559 313 5 1125 480 93 0 0 chr15 70874773 70874848 -32620126 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 1125 14039 65 1 1 chr15 70875604 70878087 -32616887 - L1Md_F2 LINE L1 -6 6576 4096 5 1125 10197 82 1 0 chr15 70878078 70879469 -32615505 + L1Md_F2 LINE L1 2716 4107 -1776 5 1125 923 320 35 41 chr15 70879503 70879848 -32615126 + MTEb LTR MaLR 35 377 -2 5 1125 383 341 54 21 chr15 70881224 70881410 -32613564 - MER115 DNA Tip100 -45 648 457 5 1125 356 132 29 0 chr15 70881816 70881884 -32613090 + (TTCA)n Simple_repeat Simple_repeat 4 73 0 5 1125 3685 168 41 3 chr15 70881906 70882688 -32612286 - Lx4B LINE L1 -780 6278 5465 5 1125 934 239 18 36 chr15 70882694 70882968 -32612006 + Lx4B LINE L1 6787 7055 -3 5 1125 363 344 18 117 chr15 70883020 70883191 -32611783 - B4A SINE B4 -137 155 2 5 1125 486 0 0 0 chr15 70883229 70883283 -32611691 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1125 2101 181 56 8 chr15 70883283 70883678 -32611296 - MTC LTR MaLR -5 416 3 5 1125 1640 188 106 23 chr15 70886222 70886609 -32608365 - MTC LTR MaLR 0 421 3 5 1125 465 62 0 0 chr15 70887263 70887328 -32607646 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1125 204 40 0 0 chr15 70887476 70887501 -32607473 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1125 408 20 0 0 chr15 70887981 70888030 -32606944 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1125 4427 88 8 3 chr15 70888441 70889060 -32605914 - L1_Mus2 LINE L1 -12 6554 5933 5 1125 313 351 84 22 chr15 70889497 70889724 -32605250 + LTR89 LTR ERVL? 2 242 -637 5 1125 232 238 15 73 chr15 70890080 70890148 -32604826 - MTEa LTR MaLR -4 375 312 5 1125 572 341 63 24 chr15 70890298 70890550 -32604424 - MTEa LTR MaLR -99 280 19 5 1125 209 419 53 5 chr15 70890926 70891113 -32603861 - L2c LINE L2 -91 3296 3101 5 1125 745 337 90 19 chr15 70891137 70891549 -32603425 - MER45B DNA Tip100 0 1040 600 5 1125 387 0 0 0 chr15 70891669 70891712 -32603262 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1125 1016 272 86 12 chr15 70892748 70893087 -32601887 - ORR1D2 LTR MaLR -4 366 3 5 1125 265 357 71 0 chr15 70894618 70894730 -32600244 - MLT2F LTR ERVL -537 126 7 5 1125 198 71 0 0 chr15 70895674 70895702 -32599272 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 5 1125 4037 104 10 3 chr15 70895944 70896533 -32598441 + L1_Mus4 LINE L1 6037 6629 -7 5 1125 242 276 60 20 chr15 70896665 70896765 -32598209 + MER53 DNA hAT 1 104 -89 5 1125 436 212 0 0 chr15 70896785 70896865 -32598109 + Lx3B LINE L1 6793 6872 -101 5 1125 306 98 0 0 chr15 70897603 70897654 -32597320 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 1125 279 0 0 0 chr15 70897654 70897684 -32597290 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 1125 357 24 0 0 chr15 70899002 70899044 -32595930 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1125 183 324 68 61 chr15 70899234 70899382 -32595592 + MIR SINE MIR 108 256 -6 5 1125 291 339 52 46 chr15 70899579 70899752 -32595222 + L1MDa LINE L1 127 300 -6333 5 1125 857 301 83 24 chr15 70900251 70900503 -32594471 - MTEa LTR MaLR -110 269 3 5 1125 2417 211 74 10 chr15 70900901 70901412 -32593562 - RMER15 LTR ERVL -2 573 30 5 1125 282 339 48 63 chr15 70901510 70901690 -32593284 + L1MDa LINE L1 1639 1808 -4825 5 1125 6127 17 0 0 chr15 70901690 70902387 -32592587 + L1Md_A LINE L1 5885 6581 -1 5 1125 285 304 50 37 chr15 70902387 70902604 -32592370 + L1MDa LINE L1 1809 2053 -4580 5 1125 264 325 42 0 chr15 70902601 70902721 -32592253 + Lx7 LINE L1 6804 6928 -768 5 1125 17277 169 92 43 chr15 70902818 70908431 -32586543 + L1_Mus3 LINE L1 725 6634 -4 6 1125 531 45 0 0 chr15 70909349 70909415 -32585559 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 1126 1155 62 7 0 chr15 70910034 70910180 -32584794 + B1_Mus2 SINE Alu 1 147 0 6 1126 480 35 0 0 chr15 70910402 70910460 -32584514 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 1126 180 77 0 0 chr15 70910633 70910659 -32584315 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 6 1126 314 206 80 2 chr15 70912215 70912325 -32582649 - Lx9 LINE L1 -366 5934 5807 6 1126 282 301 102 18 chr15 70912406 70912642 -32582332 - L1ME1 LINE L1 -217 5962 5708 6 1126 441 0 0 0 chr15 70913078 70913127 -32581847 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1126 30 59 0 0 chr15 70913381 70913432 -32581542 + AT_rich Low_complexity Low_complexity 1 51 0 6 1126 1002 316 110 20 chr15 70913477 70914211 -32580763 + L1MC1 LINE L1 5323 6122 -211 6 1126 259 250 64 26 chr15 70914376 70914454 -32580520 - BC1_Mm scRNA scRNA -57 95 15 6 1126 348 127 0 0 chr15 70915062 70915117 -32579857 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1126 314 107 50 67 chr15 70915193 70915253 -32579721 + HAL1-3A_ME LINE L1 1976 2034 -824 6 1126 207 227 0 0 chr15 70915271 70915337 -32579637 + GA-rich Low_complexity Low_complexity 2 67 0 6 1126 6988 31 1 4 chr15 70915558 70916396 -32578578 - L1Md_F3 LINE L1 -2 6582 5747 6 1126 1749 308 58 43 chr15 70918142 70918295 -32576679 + L1MA6 LINE L1 4099 4261 -1882 6 1126 251 28 28 0 chr15 70918295 70918331 -32576643 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 6 1126 1749 308 58 43 chr15 70918331 70919156 -32575818 + L1MA6 LINE L1 4262 5092 -1051 6 1126 821 119 13 19 chr15 70919156 70919310 -32575664 - Lx2A1 LINE L1 -2 7006 6854 6 1126 1749 308 58 43 chr15 70919310 70919569 -32575405 + L1MA6 LINE L1 5093 5356 -787 6 1126 220 163 47 0 chr15 70919569 70919612 -32575362 + GA-rich Low_complexity Low_complexity 1 45 0 6 1126 357 62 0 0 chr15 70919614 70919662 -32575312 + (GA)n Simple_repeat Simple_repeat 2 49 0 6 1126 26 50 0 0 chr15 70919707 70919747 -32575227 + AT_rich Low_complexity Low_complexity 1 40 0 6 1126 458 315 49 18 chr15 70919755 70920006 -32574968 + L1MA6 LINE L1 5524 5785 -386 6 1126 1197 171 0 0 chr15 70920026 70920219 -32574755 + Lx4A LINE L1 6464 6656 -402 6 1126 1236 279 101 27 chr15 70920805 70921088 -32573886 + L1MC LINE L1 4303 4622 -1524 6 1126 405 0 0 0 chr15 70921088 70921133 -32573841 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1126 1236 279 101 27 chr15 70921133 70921622 -32573352 + L1MC LINE L1 4623 5132 -1014 6 1126 833 107 0 8 chr15 70921660 70921792 -32573182 + (TC)n Simple_repeat Simple_repeat 2 132 0 6 1126 415 217 62 20 chr15 70921962 70922108 -32572866 - L1M2 LINE L1 -884 5259 5108 6 1126 299 352 40 36 chr15 70922130 70922354 -32572620 - Lx8 LINE L1 -8 7465 7241 6 1126 855 201 73 11 chr15 70922379 70922570 -32572404 + MTC LTR MaLR 1 203 -218 6 1126 626 208 87 7 chr15 70922573 70922723 -32572251 + Lx5 LINE L1 6886 7047 -3 6 1126 180 176 0 0 chr15 70923055 70923089 -32571885 + A-rich Low_complexity Low_complexity 1 34 0 6 1126 972 204 65 0 chr15 70923091 70923292 -32571682 + MTC LTR MaLR 199 412 -9 6 1126 309 373 0 0 chr15 70923296 70923414 -32571560 - Lx8 LINE L1 -246 7227 7110 6 1126 375 269 17 0 chr15 70923463 70923582 -32571392 - L1M2 LINE L1 -1062 5081 4961 6 1126 277 276 19 19 chr15 70923643 70923750 -32571224 + L1MA6 LINE L1 5855 5961 -339 6 1126 189 74 0 0 chr15 70924521 70924548 -32570426 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 1126 22 0 0 0 chr15 70924551 70924573 -32570401 + AT_rich Low_complexity Low_complexity 1 22 0 6 1126 1140 343 84 7 chr15 70924651 70925188 -32569786 - Lx8 LINE L1 -147 7326 6749 6 1126 423 0 0 0 chr15 70926164 70926211 -32568763 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1126 342 0 0 0 chr15 70926697 70926735 -32568239 + (TAA)n Simple_repeat Simple_repeat 2 39 0 6 1126 857 249 15 0 chr15 70927545 70927746 -32567228 + Lx6 LINE L1 7255 7458 -2 6 1126 2441 159 38 21 chr15 70928597 70929020 -32565954 + RLTR23 LTR ERV1 1 430 0 6 1126 212 146 0 77 chr15 70929906 70929958 -32565016 + T-rich Low_complexity Low_complexity 2 49 0 6 1126 180 0 0 0 chr15 70930008 70930028 -32564946 + (GGAA)n Simple_repeat Simple_repeat 3 22 0 6 1126 302 115 0 19 chr15 70930836 70930889 -32564085 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1126 24 96 0 0 chr15 70930903 70930976 -32563998 + AT_rich Low_complexity Low_complexity 1 73 0 6 1126 1749 130 86 0 chr15 70930985 70931286 -32563688 + IAPEY3_LTR LTR ERVK 1 327 -5 6 1126 253 289 11 0 chr15 70931352 70931442 -32563532 - L1M3 LINE L1 -300 5880 5790 6 1126 196 131 21 21 chr15 70931691 70931738 -32563236 + (TTTG)n Simple_repeat Simple_repeat 1 47 0 6 1126 526 230 9 17 chr15 70931738 70931853 -32563121 - PB1D10 SINE Alu -1 116 3 6 1126 315 0 0 0 chr15 70932657 70932692 -32562282 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1126 357 62 0 0 chr15 70932706 70932754 -32562220 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1126 5544 104 15 42 chr15 70932830 70933741 -32561233 + RMER17D LTR ERVK 1 887 -2 6 1126 351 0 0 0 chr15 70934290 70934329 -32560645 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 6 1126 38477 6 1 0 chr15 70934971 70940140 -32554834 + L1Md_A LINE L1 412 5586 -297 6 1126 8959 4 0 0 chr15 70940140 70941135 -32553839 + L1Md_A LINE L1 5587 6581 -1 6 1126 8458 25 5 1 chr15 70941175 70942703 -32552271 - L1Md_T LINE L1 -2 6580 5049 6 1126 407 85 49 0 chr15 70942857 70942939 -32552035 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 6 1126 2155 177 32 10 chr15 70942971 70943371 -32551603 - MTC LTR MaLR 0 421 13 6 1126 265 323 197 29 chr15 70943377 70943657 -32551317 - MLT2B4 LTR ERVL -89 467 90 6 1126 794 271 87 21 chr15 70943670 70944024 -32550950 + MTD LTR MaLR 7 405 -14 6 1126 46 62 0 0 chr15 70944110 70944191 -32550783 + AT_rich Low_complexity Low_complexity 1 81 0 6 1126 450 244 0 0 chr15 70945230 70945349 -32549625 + (TG)n Simple_repeat Simple_repeat 1 119 0 6 1126 24 0 0 0 chr15 70945700 70945724 -32549250 + AT_rich Low_complexity Low_complexity 1 24 0 6 1126 1280 222 74 54 chr15 70946033 70946230 -32548744 - ORR1D1 LTR MaLR -6 368 164 6 1126 961 102 0 12 chr15 70946230 70946398 -32548576 + (GA)n Simple_repeat Simple_repeat 1 166 0 6 1126 1280 222 74 54 chr15 70946398 70946552 -32548422 - ORR1D1 LTR MaLR -211 163 10 6 1126 725 313 60 65 chr15 70946920 70947274 -32547700 + MTE2a LTR MaLR 63 377 -42 6 1126 1050 103 7 0 chr15 70947442 70947587 -32547387 + B1_Mm SINE Alu 2 147 0 6 1126 232 25 75 0 chr15 70947592 70947632 -32547342 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 6 1126 782 94 0 0 chr15 70947645 70947751 -32547223 + LTRIS2 LTR ERV1 380 485 -79 6 1126 327 252 103 0 chr15 70950440 70950547 -32544427 - Lx7 LINE L1 -1 7695 7578 6 1126 487 92 46 0 chr15 70950547 70950656 -32544318 + (TC)n Simple_repeat Simple_repeat 1 114 0 6 1126 1502 244 6 12 chr15 70950803 70951139 -32543835 - Lx7 LINE L1 -383 7313 6980 6 1126 185 226 73 36 chr15 70951869 70951924 -32543050 - L4 LINE RTE -795 1234 1178 6 1126 414 0 0 0 chr15 70951933 70951979 -32542995 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 6 1126 186 338 76 35 chr15 70954407 70954511 -32540463 + L4 LINE RTE 1167 1274 -755 6 1126 7158 83 47 6 chr15 70954511 70955494 -32539480 - RLTR13D5 LTR ERVK 0 1023 1 6 1126 186 338 76 35 chr15 70955494 70955533 -32539441 + L4 LINE RTE 1275 1316 -713 6 1126 354 221 0 22 chr15 70956041 70956180 -32538794 + (TG)n Simple_repeat Simple_repeat 2 137 0 6 1126 298 308 137 47 chr15 70956213 70956424 -32538550 - B4A SINE B4 -5 287 58 6 1126 27 0 0 0 chr15 70957594 70957621 -32537353 + AT_rich Low_complexity Low_complexity 1 27 0 6 1126 1128 319 30 3 chr15 70957623 70957960 -32537014 + MTEa LTR MaLR 34 379 0 6 1126 441 0 0 0 chr15 70959014 70959063 -32535911 + (TA)n Simple_repeat Simple_repeat 1 49 0 6 1126 469 227 38 87 chr15 70959550 70959815 -32535159 + RMER17C LTR ERVK 1 252 -158 6 1126 343 252 8 50 chr15 70959815 70959936 -32535038 + C-rich Low_complexity Low_complexity 4 119 0 6 1126 34 0 0 0 chr15 70960070 70960104 -32534870 + AT_rich Low_complexity Low_complexity 1 34 0 6 1126 951 57 0 0 chr15 70960196 70960318 -32534656 + (GGA)n Simple_repeat Simple_repeat 2 123 0 6 1126 705 144 0 0 chr15 70960949 70961067 -32533907 + (TC)n Simple_repeat Simple_repeat 1 118 0 6 1126 180 194 0 0 chr15 70961216 70961247 -32533727 + MIRm SINE MIR 113 143 -133 6 1126 342 91 0 0 chr15 70962521 70962576 -32532398 + (TC)n Simple_repeat Simple_repeat 2 56 0 6 1126 676 225 14 21 chr15 70962588 70962729 -32532245 - B1_Mur3 SINE Alu -9 140 1 6 1126 344 222 46 107 chr15 70962618 70962749 -32532225 - MT2B LTR ERVL -337 264 142 6 1126 526 314 33 0 chr15 70963271 70963481 -32531493 + L1MC3 LINE L1 7551 7767 -18 6 1126 237 33 0 0 chr15 70963726 70963756 -32531218 + (TTG)n Simple_repeat Simple_repeat 2 31 0 6 1126 658 142 124 16 chr15 70965185 70965314 -32529660 - B1_Mus1 SINE Alu -5 143 1 6 1126 954 107 0 33 chr15 70965425 70965608 -32529366 + (TCC)n Simple_repeat Simple_repeat 2 178 0 6 1126 933 277 20 0 chr15 70965828 70966030 -32528944 + ORR1D1 LTR MaLR 1 206 -168 6 1126 22806 165 12 33 chr15 70966135 70971034 -32523940 - L1_Mus4 LINE L1 -12 6624 1864 6 1126 216 0 0 0 chr15 70971034 70971058 -32523916 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1126 22806 206 44 32 chr15 70971058 70972375 -32522599 - L1_Mus4 LINE L1 -4023 1863 503 6 1126 203 281 92 13 chr15 70972558 70972649 -32522325 - MIRm SINE MIR -102 166 69 6 1126 255 41 40 20 chr15 70973024 70973074 -32521900 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 6 1126 194 333 0 0 chr15 70973321 70973369 -32521605 - MIRb SINE MIR -156 112 65 6 1126 534 16 0 0 chr15 70974192 70974255 -32520719 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1126 441 0 0 0 chr15 70975500 70975549 -32519425 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1126 258 130 259 0 chr15 70975556 70975610 -32519364 - RLTR20A1 LTR ERVK -483 68 1 6 1126 875 252 5 33 chr15 70975718 70975931 -32519043 + B3 SINE B2 3 209 -7 6 1126 3555 36 0 0 chr15 70975944 70976365 -32518609 - L1Md_F2 LINE L1 -14 6568 6148 6 1126 237 65 0 0 chr15 70976404 70976435 -32518539 + (TATG)n Simple_repeat Simple_repeat 4 34 0 6 1126 782 236 99 0 chr15 70976664 70976855 -32518119 + Lx5 LINE L1 6280 6489 -561 7 1126 656 299 103 22 chr15 70977333 70977644 -32517330 + Lx8 LINE L1 7108 7443 -30 7 1126 2155 225 27 8 chr15 70978344 70978819 -32516155 - RLTR16 LTR ERVK -11 494 11 7 1126 300 289 70 0 chr15 70979962 70980076 -32514898 - MLT2D LTR ERVL -273 141 20 7 1126 1130 83 0 0 chr15 70980122 70980258 -32514716 + B1_Mm SINE Alu 2 137 -10 7 1126 289 0 49 0 chr15 70980258 70980299 -32514675 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 7 1126 520 50 25 0 chr15 70980430 70980510 -32514464 + (TG)n Simple_repeat Simple_repeat 2 83 0 7 1126 22 0 0 0 chr15 70980609 70980631 -32514343 + AT_rich Low_complexity Low_complexity 1 22 0 7 1126 4673 191 36 9 chr15 70980810 70981726 -32513248 + Lx4A LINE L1 6112 7052 -6 7 1126 225 94 0 0 chr15 70981892 70981924 -32513050 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 1126 1056 16 0 0 chr15 70982018 70982140 -32512834 + (TC)n Simple_repeat Simple_repeat 1 122 0 7 1126 279 0 0 0 chr15 70982140 70982170 -32512804 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 1126 230 339 71 0 chr15 70982832 70982944 -32512030 + MIR SINE MIR 106 225 -37 7 1126 730 255 30 12 chr15 70985284 70985451 -32509523 + B3 SINE B2 2 171 -45 7 1126 261 0 0 0 chr15 70985461 70985490 -32509484 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 7 1126 351 0 0 0 chr15 70985521 70985560 -32509414 + (TTA)n Simple_repeat Simple_repeat 2 40 0 7 1126 1316 138 137 4 chr15 70985565 70985806 -32509168 - Lx3B LINE L1 -4 6969 6697 7 1126 452 234 6 0 chr15 70986081 70986248 -32508726 + (TG)n Simple_repeat Simple_repeat 1 168 0 7 1126 448 240 6 6 chr15 70986306 70986486 -32508488 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1126 333 197 0 0 chr15 70986561 70986637 -32508337 + (TG)n Simple_repeat Simple_repeat 2 77 0 7 1126 294 276 23 11 chr15 70987453 70987541 -32507433 + GA-rich Low_complexity Low_complexity 5 93 0 7 1126 416 19 19 0 chr15 70988047 70988100 -32506874 + (CA)n Simple_repeat Simple_repeat 2 55 0 7 1126 521 220 58 39 chr15 70988143 70988299 -32506675 - MER5A1 DNA MER1_type 0 166 8 7 1126 27 73 0 0 chr15 70988925 70988980 -32505994 + AT_rich Low_complexity Low_complexity 1 55 0 7 1126 1010 243 41 96 chr15 70989351 70989690 -32505284 + MT2A LTR ERVL 1 454 -147 7 1126 869 344 147 14 chr15 70989698 70990261 -32504713 + Lx8 LINE L1 6807 7444 -29 7 1126 3241 66 131 0 chr15 70990280 70990722 -32504252 - L1_Mus1 LINE L1 -1 6566 6067 7 1126 371 339 15 0 chr15 70991526 70991656 -32503318 + GA-rich Low_complexity Low_complexity 3 134 0 7 1126 478 58 58 0 chr15 70993287 70993356 -32501618 - L1_Mus2 LINE L1 -279 6287 6215 7 1126 1737 101 30 26 chr15 70993356 70993620 -32501354 + L1_Mus2 LINE L1 6302 6566 0 7 1126 21 0 0 0 chr15 70993814 70993835 -32501139 + AT_rich Low_complexity Low_complexity 1 21 0 7 1126 228 67 0 0 chr15 70993835 70993865 -32501109 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 7 1126 230 409 27 0 chr15 70994134 70994244 -32500730 + L2 LINE L2 1253 1365 -2054 7 1126 745 331 49 56 chr15 70994886 70994953 -32500021 + B4A SINE B4 10 72 -220 7 1126 3026 57 26 0 chr15 70994953 70995342 -32499632 - MTB LTR MaLR 0 400 2 7 1126 745 331 49 56 chr15 70995342 70995559 -32499415 + B4A SINE B4 73 292 0 7 1126 1015 88 0 0 chr15 70995785 70995967 -32499007 + L1_Mus1 LINE L1 6425 6567 0 7 1126 386 218 82 8 chr15 70996272 70996377 -32498597 - MTD LTR MaLR -19 400 272 7 1126 1569 273 82 21 chr15 70996378 70996901 -32498073 - RMER19C LTR ERVK 0 611 57 7 1126 567 349 36 5 chr15 70996904 70997100 -32497874 - MTD LTR MaLR -121 298 97 7 1126 15061 97 11 7 chr15 70997101 71000000 -32494974 + L1Md_F LINE L1 400 3310 -2573 7 1126 18162 84 14 16 chr15 71000000 71000897 -32494077 + L1Md_F2 LINE L1 3311 4204 -1679 1 1126 429 36 0 0 chr15 71000897 71000952 -32494022 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1126 18162 85 12 12 chr15 71000952 71003290 -32491684 + L1Md_F2 LINE L1 4205 6545 -37 1 1126 669 223 119 11 chr15 71003756 71003933 -32491041 - MTEa LTR MaLR 0 379 184 3 1126 229 219 0 0 chr15 71003938 71004002 -32490972 + L1_Mur2 LINE L1 1949 2012 -3865 4 1126 405 0 0 0 chr15 71004004 71004049 -32490925 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 5 1126 754 250 63 60 chr15 71004058 71004225 -32490749 - Lx9 LINE L1 -1 7643 7477 6 1126 288 0 0 0 chr15 71004225 71004257 -32490717 + (TA)n Simple_repeat Simple_repeat 2 33 0 7 1126 754 250 63 60 chr15 71004257 71004408 -32490566 - Lx9 LINE L1 -168 7476 7324 6 1126 313 349 137 0 chr15 71004410 71004556 -32490418 - MTEa LTR MaLR -213 166 1 3 1126 508 235 13 19 chr15 71004556 71004712 -32490262 - L1MA8 LINE L1 -99 6192 6038 8 1126 7334 209 56 22 chr15 71005165 71007207 -32487767 + Lx4B LINE L1 733 2858 -3019 9 1126 5849 165 52 8 chr15 71007205 71009040 -32485934 + Lx4B LINE L1 4676 6602 -456 9 1126 1452 205 27 10 chr15 71009038 71009338 -32485636 + Lx4B LINE L1 6723 7027 -31 9 1126 306 0 0 0 chr15 71009348 71009382 -32485592 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 1 1126 752 261 171 46 chr15 71010354 71010723 -32484251 + MTD LTR MaLR 5 419 0 1 1126 264 59 0 0 chr15 71010776 71010810 -32484164 + (TAA)n Simple_repeat Simple_repeat 1 34 0 1 1126 562 309 97 44 chr15 71011636 71011957 -32483017 + MLT2B3 LTR ERVL 31 368 -188 1 1126 1197 258 34 67 chr15 71011959 71012346 -32482628 - ORR1C1 LTR MaLR -2 376 3 1 1126 232 139 70 0 chr15 71012418 71012461 -32482513 + MLT2D LTR ERVL 510 555 -5 1 1126 26 0 0 0 chr15 71012522 71012548 -32482426 + AT_rich Low_complexity Low_complexity 1 26 0 1 1126 466 304 97 82 chr15 71013862 71014200 -32480774 + MLT1A LTR MaLR 2 344 -30 1 1126 441 378 50 18 chr15 71014200 71014537 -32480437 - MLT1A0 LTR MaLR -2 363 16 1 1126 305 308 73 22 chr15 71015619 71015755 -32479219 + Arthur1B DNA Tip100 24 166 -1059 1 1126 727 323 36 36 chr15 71016450 71016607 -32478367 + RMER5 LTR ERV1 33 190 -344 2 1126 1040 166 0 11 chr15 71016607 71016790 -32478184 - B2_Mm2 SINE B2 -13 182 2 2 1126 727 323 36 36 chr15 71016790 71016937 -32478037 + RMER5 LTR ERV1 191 337 -197 2 1126 184 385 46 0 chr15 71018101 71018166 -32476808 - L2b LINE L2 -81 3294 3227 2 1126 29 28 0 0 chr15 71018623 71018659 -32476315 + AT_rich Low_complexity Low_complexity 1 36 0 2 1126 532 267 55 13 chr15 71019089 71019241 -32475733 - MTD LTR MaLR -260 159 6 2 1126 275 356 39 0 chr15 71020937 71021041 -32473933 - PB1D10 SINE Alu -9 108 1 2 1126 325 345 75 14 chr15 71021072 71021284 -32473690 - Lx8 LINE L1 -2 7471 7247 2 1126 441 0 0 0 chr15 71021758 71021807 -32473167 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 2 1126 498 300 93 12 chr15 71021808 71022071 -32472903 - L1MA4 LINE L1 -181 5975 5696 2 1126 189 0 0 0 chr15 71023065 71023086 -32471888 + (TC)n Simple_repeat Simple_repeat 1 21 0 2 1126 189 0 0 0 chr15 71025162 71025183 -32469791 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 3 1126 216 267 17 0 chr15 71026650 71026710 -32468264 + CT-rich Low_complexity Low_complexity 2 62 0 3 1126 694 343 44 20 chr15 71027855 71028197 -32466777 - Lx8 LINE L1 -73 7400 7051 3 1126 555 255 107 0 chr15 71028230 71028379 -32466595 - Lx8 LINE L1 -520 6953 6789 3 1126 348 313 127 12 chr15 71029288 71029453 -32465521 + MER58B DNA MER1_type 91 274 -67 3 1126 405 156 0 0 chr15 71029468 71029545 -32465429 + (TA)n Simple_repeat Simple_repeat 1 77 0 3 1126 181 321 43 97 chr15 71030092 71030185 -32464789 + L4 LINE RTE 1788 1875 -154 3 1126 213 343 45 0 chr15 71030482 71030549 -32464425 + L2b LINE L2 3240 3309 -66 3 1126 516 261 22 15 chr15 71030785 71030921 -32464053 + B1F2 SINE Alu 13 149 0 3 1126 7304 141 71 18 chr15 71031293 71033733 -32461241 - L1_Mus4 LINE L1 0 6997 4412 3 1126 261 265 0 0 chr15 71034476 71034544 -32460430 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 1126 2404 54 44 3 chr15 71034843 71035160 -32459814 - L1Md_F2 LINE L1 -10 6572 6243 4 1126 738 128 0 0 chr15 71036109 71036226 -32458748 + (GGAA)n Simple_repeat Simple_repeat 4 120 0 4 1126 37815 34 1 0 chr15 71036263 71040936 -32454038 - L1Md_F2 LINE L1 -89 5794 1119 4 140 2373 88 95 8 chr15 71040942 71041320 -32453654 + IAPLTR2a LTR ERVK 1 411 0 4 1127 536 159 16 124 chr15 71041321 71041450 -32453524 + IAPEz-int LTR ERVK 9 123 -6358 4 1127 227 267 0 0 chr15 71041450 71041495 -32453479 + RLTR27 LTR ERVK 231 275 -34 4 1127 3448 66 7 16 chr15 71041495 71042070 -32452904 + IAPEz-int LTR ERVK 168 662 -5819 4 1127 2211 68 0 0 chr15 71042070 71042348 -32452626 + IAPEz-int LTR ERVK 1359 1636 -4845 4 1127 6195 36 4 12 chr15 71042342 71043097 -32451877 + IAPEz-int LTR ERVK 5731 6479 -2 4 1127 2368 86 101 8 chr15 71043099 71043475 -32451499 + IAPLTR2a LTR ERVK 1 411 0 4 1127 1499 66 47 0 chr15 71043485 71043696 -32451278 - L1Md_Gf LINE L1 -5465 1057 837 4 1127 5895 64 1 0 chr15 71043696 71044446 -32450528 + L1Md_T LINE L1 5831 6581 -1 4 1127 476 357 50 43 chr15 71044788 71045069 -32449905 - RMER15 LTR ERVL -14 561 279 4 1127 3753 36 0 0 chr15 71045311 71045759 -32449215 - L1Md_F3 LINE L1 -404 6180 5733 4 1127 357 18 18 0 chr15 71045759 71045816 -32449158 + L1Md_F3 LINE L1 6527 6584 0 4 1127 222 220 0 0 chr15 71047249 71047308 -32447666 + GA-rich Low_complexity Low_complexity 2 60 0 4 1127 33 0 0 0 chr15 71047767 71047800 -32447174 + AT_rich Low_complexity Low_complexity 1 33 0 5 1127 2958 225 56 7 chr15 71047804 71048553 -32446421 - Lx2B LINE L1 -42 6934 6158 5 1127 627 14 0 0 chr15 71050535 71050607 -32444367 + (TG)n Simple_repeat Simple_repeat 2 73 0 5 1127 583 309 19 54 chr15 71050919 71051084 -32443890 + B3A SINE B2 1 165 -33 5 1127 513 0 0 0 chr15 71051084 71051141 -32443833 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1127 583 309 19 54 chr15 71051141 71051180 -32443794 + B3A SINE B2 166 198 0 5 1127 369 0 0 0 chr15 71052172 71052213 -32442761 + (TC)n Simple_repeat Simple_repeat 1 41 0 5 1127 432 0 0 0 chr15 71052213 71052260 -32442714 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1127 268 350 76 91 chr15 71052373 71052637 -32442337 - Lx8 LINE L1 -244 7229 6970 5 1127 1119 82 7 0 chr15 71053531 71053678 -32441296 + B1_Mus1 SINE Alu 1 148 0 5 1127 230 130 0 69 chr15 71053680 71053738 -32441236 + A-rich Low_complexity Low_complexity 3 56 0 5 1127 7050 141 50 2 chr15 71054063 71055387 -32439587 + Lx4A LINE L1 5446 6846 -212 6 1127 459 35 0 0 chr15 71055457 71055514 -32439460 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1127 272 244 44 55 chr15 71055602 71055693 -32439281 + B4A SINE B4 203 292 0 6 1127 1153 120 22 11 chr15 71057664 71057849 -32437125 - B2_Mm2 SINE B2 -7 188 2 6 1127 485 326 21 0 chr15 71058630 71058774 -32436200 - MLT2B4 LTR ERVL -409 147 1 6 1127 292 300 59 37 chr15 71058778 71058913 -32436061 - MLT1C LTR MaLR -329 138 1 6 1127 249 391 0 0 chr15 71058955 71059024 -32435950 - ID4_ SINE ID -11 72 4 6 1127 543 341 58 32 chr15 71059520 71059708 -32435266 - B4A SINE B4 -97 195 3 6 1127 200 392 0 0 chr15 71059990 71060064 -32434910 - MIRb SINE MIR -77 191 118 6 1127 492 385 43 31 chr15 71060169 71060424 -32434550 - LTR16A LTR ERVL -27 424 167 6 1127 483 18 0 0 chr15 71061014 71061070 -32433904 + (TAA)n Simple_repeat Simple_repeat 2 57 0 7 1127 2773 33 0 45 chr15 71061396 71061749 -32433225 - IAPLTR1a_Mm LTR ERVK 0 337 1 7 1127 7568 20 3 0 chr15 71061749 71062649 -32432325 - IAPEz-int LTR ERVK 0 6481 5579 7 1127 41112 24 16 7 chr15 71062650 71067660 -32427314 - IAPEz-int LTR ERVK -1418 5063 8 7 1127 2773 33 0 45 chr15 71067660 71068013 -32426961 - IAPLTR1a_Mm LTR ERVK 0 337 1 7 1127 1874 103 11 3 chr15 71068162 71068444 -32426530 + L1_Mus3 LINE L1 6354 6637 -1 7 1127 1049 149 149 0 chr15 71070187 71070382 -32424592 - URR1B DNA MER1_type 0 225 2 7 1127 266 260 90 63 chr15 71070920 71071031 -32423943 + L2a LINE L2 3284 3397 -29 7 1127 21 0 0 0 chr15 71072174 71072195 -32422779 + AT_rich Low_complexity Low_complexity 1 21 0 7 1127 518 43 14 0 chr15 71072400 71072469 -32422505 + (TTTA)n Simple_repeat Simple_repeat 2 71 0 7 1127 3868 158 27 11 chr15 71072469 71073134 -32421840 - Lx4B LINE L1 -19 7039 6364 7 1127 626 309 40 0 chr15 71073186 71073335 -32421639 + RSINE1 SINE B4 11 165 0 7 1127 401 307 124 96 chr15 71073855 71074251 -32420723 - MLT1H1 LTR MaLR -1 554 148 7 1127 314 310 0 0 chr15 71074700 71074816 -32420158 - Lx9 LINE L1 -171 7473 7358 8 1127 931 308 43 35 chr15 71074993 71075747 -32419227 - Lx5 LINE L1 -328 7132 6121 8 1127 2059 199 21 9 chr15 71075749 71076311 -32418663 + Lx6 LINE L1 5505 6075 -1385 8 1127 412 334 95 25 chr15 71076333 71076649 -32418325 + L2 LINE L2 2571 2908 -511 8 1127 660 227 8 73 chr15 71077864 71078216 -32416758 - Lx9 LINE L1 -9 7635 7247 8 1127 1173 208 65 28 chr15 71078417 71078837 -32416137 - L1Md_F LINE L1 -5639 898 450 8 1127 1823 52 32 0 chr15 71078832 71079081 -32415893 + L1_Mus2 LINE L1 5878 6134 -432 8 1127 1324 334 67 13 chr15 71079078 71080094 -32414880 - Lx8 LINE L1 -264 7209 6112 8 1127 906 290 46 108 chr15 71080931 71081044 -32413930 + B4 SINE B4 4 110 -182 8 1127 1246 71 11 0 chr15 71081044 71081226 -32413748 - L1Md_F2 LINE L1 0 6582 6399 8 1127 906 290 46 108 chr15 71081226 71081417 -32413557 + B4 SINE B4 111 289 -3 8 1127 189 0 0 0 chr15 71083063 71083084 -32411890 + (T)n Simple_repeat Simple_repeat 1 21 0 9 1127 296 170 0 0 chr15 71084579 71084626 -32410348 - Lx4B LINE L1 -237 6821 6775 9 1127 1173 75 0 0 chr15 71084637 71084783 -32410191 - B1_Mus1 SINE Alu -2 146 1 9 1127 464 301 169 23 chr15 71085001 71085345 -32409629 - Lx9 LINE L1 -176 7468 7075 9 1127 334 275 38 0 chr15 71085484 71085564 -32409410 + B3A SINE B2 2 84 -114 9 1127 2089 169 66 6 chr15 71085677 71086041 -32408933 + ORR1B1 LTR MaLR 1 386 -8 9 1127 594 51 0 0 chr15 71086225 71086303 -32408671 + (TG)n Simple_repeat Simple_repeat 2 79 0 9 1127 1585 209 75 39 chr15 71086303 71086661 -32408313 - ORR1D1 LTR MaLR -3 371 1 9 1127 214 181 35 46 chr15 71086806 71086893 -32408081 + (CATATA)n Simple_repeat Simple_repeat 3 88 0 9 1127 645 259 155 0 chr15 71087029 71087222 -32407752 - MTD LTR MaLR -20 399 177 9 1127 606 28 0 0 chr15 71087752 71087824 -32407150 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 1127 670 325 82 0 chr15 71087827 71088070 -32406904 - B4A SINE B4 -29 263 1 1 1127 301 278 14 14 chr15 71088579 71088652 -32406322 + B4A SINE B4 1 73 -219 1 1127 277 302 129 12 chr15 71088652 71088689 -32406285 + B3A SINE B2 1 118 -98 1 1127 663 83 18 9 chr15 71088776 71088885 -32406089 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 1 1127 363 23 0 0 chr15 71088955 71088999 -32405975 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1127 337 317 53 30 chr15 71089311 71089482 -32405492 + MIRb SINE MIR 80 258 -4 1 1127 710 316 114 11 chr15 71090527 71090886 -32404088 + Lx8 LINE L1 7073 7468 -5 1 1127 1147 156 0 5 chr15 71091020 71091207 -32403767 + B2_Mm2 SINE B2 2 187 -8 1 1127 2972 84 40 2 chr15 71091376 71091830 -32403144 - Lx3_Mus LINE L1 -557 6452 5982 1 1127 3663 88 51 8 chr15 71091830 71092355 -32402619 + Lx3_Mus LINE L1 6462 7009 0 1 1127 226 296 0 0 chr15 71093120 71093174 -32401800 + RSINE1 SINE B4 7 60 -105 1 1127 306 0 0 0 chr15 71093223 71093257 -32401717 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 1127 207 0 0 0 chr15 71093257 71093279 -32401695 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 1127 34598 47 8 9 chr15 71093372 71098713 -32396261 + L1Md_F LINE L1 331 5586 -297 1 1127 8502 31 0 0 chr15 71098713 71099709 -32395265 + L1Md_A LINE L1 5587 6582 0 1 1127 255 57 0 0 chr15 71100092 71100127 -32394847 + L1Md_T LINE L1 6059 6093 -489 1 1127 314 306 49 37 chr15 71100582 71100745 -32394229 + L1MB7 LINE L1 5649 5813 -371 1 1127 351 306 80 15 chr15 71100935 71101134 -32393840 + L1MB7 LINE L1 5947 6158 -26 1 1127 477 172 0 0 chr15 71101796 71101889 -32393085 + GA-rich Low_complexity Low_complexity 4 96 0 1 1127 457 204 7 7 chr15 71101923 71102061 -32392913 + CT-rich Low_complexity Low_complexity 2 139 0 1 1127 312 264 180 52 chr15 71102141 71102313 -32392661 - MLT2B2 LTR ERVL -37 525 310 1 1127 233 380 6 90 chr15 71102584 71102740 -32392234 - MIR SINE MIR -119 143 1 1 1127 184 212 101 141 chr15 71102740 71102835 -32392139 - L3 LINE CR1 -3567 922 832 1 1127 210 91 0 0 chr15 71103030 71103063 -32391911 + (T)n Simple_repeat Simple_repeat 1 33 0 1 1127 267 283 0 16 chr15 71103273 71103334 -32391640 + RSINE1 SINE B4 11 70 -95 1 1127 432 0 0 0 chr15 71103342 71103390 -32391584 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1127 3007 103 220 47 chr15 71103501 71103836 -32391138 - RMER17A LTR ERVK 0 751 354 1 1127 1027 97 11 17 chr15 71103836 71104015 -32390959 + (GGAGA)n Simple_repeat Simple_repeat 2 179 0 1 1127 3007 103 220 47 chr15 71104015 71104319 -32390655 - RMER17A LTR ERVK -398 353 1 1 1127 22 56 0 0 chr15 71104325 71104361 -32390613 + AT_rich Low_complexity Low_complexity 1 36 0 1 1127 245 360 62 9 chr15 71104601 71104713 -32390261 + B4 SINE B4 1 118 -174 1 1127 947 232 116 91 chr15 71104826 71105187 -32389787 + RLTR12B LTR ERVK 12 381 -147 1 1127 362 300 117 6 chr15 71105539 71105710 -32389264 + MLT1D LTR MaLR 3 192 -313 1 1127 367 297 155 19 chr15 71105761 71105967 -32389007 + MLT1D LTR MaLR 272 505 0 1 1127 22 0 0 0 chr15 71106311 71106333 -32388641 + AT_rich Low_complexity Low_complexity 1 22 0 1 1127 21 0 0 0 chr15 71107351 71107372 -32387602 + AT_rich Low_complexity Low_complexity 1 21 0 1 1127 1264 290 18 40 chr15 71107701 71108097 -32386877 - MTE2a LTR MaLR -2 417 20 1 1127 28 0 0 0 chr15 71108419 71108447 -32386527 + AT_rich Low_complexity Low_complexity 1 28 0 1 1127 513 131 0 0 chr15 71108461 71108545 -32386429 + (TG)n Simple_repeat Simple_repeat 1 84 0 1 1127 306 364 0 8 chr15 71108689 71108811 -32386163 + MLT1C LTR MaLR 343 463 -4 1 1127 433 367 47 24 chr15 71108877 71109089 -32385885 + Tigger5 DNA MER2_type 20 236 -2170 1 1127 795 319 40 52 chr15 71109265 71109612 -32385362 - MLT2B1 LTR ERVL -172 348 6 1 1127 2002 228 36 17 chr15 71110757 71111280 -32383694 - MT2A LTR ERVL 0 533 1 1 1127 278 244 5 30 chr15 71112051 71112256 -32382718 + GA-rich Low_complexity Low_complexity 1 199 0 1 1127 264 59 0 0 chr15 71112628 71112662 -32382312 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1127 2878 177 41 2 chr15 71113077 71113643 -32381331 - Lx2B LINE L1 -440 6560 5973 1 1127 1914 227 10 5 chr15 71113644 71114042 -32380932 + Lx2B LINE L1 6597 6996 -4 1 1127 1788 153 181 10 chr15 71114989 71115386 -32379588 - RMER4A LTR ERVK -1 465 1 1 1127 375 265 436 0 chr15 71116006 71116155 -32378819 + B3A SINE B2 1 214 -2 1 1127 5167 58 0 1 chr15 71116531 71117184 -32377790 - L1Md_F2 LINE L1 0 6582 5931 1 1127 188 379 0 22 chr15 71118149 71118238 -32376736 + MIR SINE MIR 95 181 -81 1 1127 228 224 20 0 chr15 71120356 71120405 -32374569 - MER67B LTR ERV1 -274 387 338 1 1127 1105 289 56 74 chr15 71120633 71121010 -32373964 + MTEa LTR MaLR 1 370 -9 1 1127 226 214 10 152 chr15 71121432 71121531 -32373443 - RMER17D2 LTR ERVK -666 143 59 1 1127 744 258 5 26 chr15 71122347 71122538 -32372436 + MTD LTR MaLR 1 187 -232 1 1127 570 274 33 33 chr15 71122966 71123181 -32371793 + B3 SINE B2 2 216 0 1 1127 356 360 88 0 chr15 71123277 71123413 -32371561 + B1F SINE Alu 1 148 -1 1 1127 450 301 79 6 chr15 71123431 71123608 -32371366 + B3A SINE B2 1 190 -8 1 1127 6467 124 21 12 chr15 71123741 71125071 -32369903 - Lx LINE L1 -8 6646 5300 1 1127 4634 147 20 64 chr15 71125071 71126014 -32368960 - RLTR13D6 LTR ERVK 0 902 1 1 1127 6377 155 8 8 chr15 71126014 71126603 -32368371 - Lx LINE L1 -584 5299 4712 1 1127 432 0 0 0 chr15 71128637 71128685 -32366289 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1127 423 0 0 0 chr15 71128685 71128731 -32366243 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 1127 612 311 86 86 chr15 71129514 71129876 -32365098 - MLT1A0 LTR MaLR 0 365 4 1 1127 188 244 67 0 chr15 71130499 71130544 -32364430 + L2b LINE L2 3323 3370 -5 1 1127 283 360 0 9 chr15 71131140 71131255 -32363719 - MIR SINE MIR -4 258 145 1 1127 1423 295 76 71 chr15 71131374 71131791 -32363183 - Lx8 LINE L1 -2 7471 7028 1 1127 740 223 162 78 chr15 71131791 71132014 -32362960 - RMER10A LTR ERVL 0 442 206 1 1127 243 0 0 0 chr15 71132014 71132041 -32362933 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1127 740 223 162 78 chr15 71132041 71132225 -32362749 - RMER10A LTR ERVL -237 205 1 1 1127 1423 295 76 71 chr15 71132225 71132309 -32362665 - Lx8 LINE L1 -446 7027 6941 1 1127 243 0 0 0 chr15 71132309 71132336 -32362638 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1127 1423 295 76 71 chr15 71132336 71132711 -32362263 - Lx8 LINE L1 -533 6940 6589 1 1127 540 298 15 87 chr15 71133042 71133248 -32361726 - B3A SINE B2 -4 194 4 1 1127 611 351 129 15 chr15 71133915 71134311 -32360663 + MLT2B2 LTR ERVL 3 443 -72 1 1127 3191 31 5 13 chr15 71134882 71135275 -32359699 - L1Md_F2 LINE L1 -1 6581 6192 1 1127 1005 32 0 0 chr15 71135276 71135402 -32359572 - L1Md_F2 LINE L1 -501 6081 5956 1 1127 1313 137 9 5 chr15 71135439 71135659 -32359315 - Lx2 LINE L1 0 6997 6777 1 1127 6103 146 24 19 chr15 71135661 71137070 -32357904 - Lx2 LINE L1 -354 6643 5246 1 1127 184 122 20 39 chr15 71137168 71137219 -32357755 + CT-rich Low_complexity Low_complexity 4 53 0 1 1127 222 116 0 0 chr15 71137437 71137480 -32357494 + (A)n Simple_repeat Simple_repeat 1 43 0 1 1127 2972 80 50 0 chr15 71138082 71138506 -32356468 - L1_Mus1 LINE L1 -139 5744 5300 1 1127 5937 79 4 2 chr15 71138504 71139358 -32355616 + L1_Mus1 LINE L1 5729 6567 0 1 1127 237 65 0 0 chr15 71139364 71139395 -32355579 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 1 1127 23 0 0 0 chr15 71141945 71141968 -32353006 + AT_rich Low_complexity Low_complexity 1 23 0 1 1127 527 211 112 17 chr15 71142133 71142249 -32352725 - ID_B1 SINE B4 -4 220 94 1 1127 1017 212 18 9 chr15 71143662 71143886 -32351088 + URR1A DNA MER1_type 1 226 0 1 1127 339 338 56 49 chr15 71144977 71145139 -32349835 - RSINE1 SINE B4 0 165 3 1 1127 261 0 0 0 chr15 71145881 71145910 -32349064 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1127 293 320 132 76 chr15 71147396 71147646 -32347328 - MLT1E3 LTR MaLR 0 624 361 1 1127 239 321 44 15 chr15 71149027 71149163 -32345811 - Lx9 LINE L1 -137 7507 7368 1 1127 976 307 50 20 chr15 71149386 71149763 -32345211 - MTD LTR MaLR -14 386 11 1 1127 394 284 131 0 chr15 71150983 71151159 -32343815 + Lx8 LINE L1 6305 6503 -970 1 1127 1313 259 61 21 chr15 71151382 71151709 -32343265 + ORR1D2 LTR MaLR 3 342 -28 1 1127 396 0 0 0 chr15 71151710 71151754 -32343220 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1127 1031 198 15 0 chr15 71152399 71152601 -32342373 + Lx9 LINE L1 7261 7465 -179 1 1127 470 227 8 0 chr15 71152633 71152765 -32342209 + (CATATA)n Simple_repeat Simple_repeat 1 133 0 1 1127 554 164 53 0 chr15 71152766 71152918 -32342056 + Lx9 LINE L1 7478 7637 -7 1 1127 270 0 0 0 chr15 71153593 71153623 -32341351 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 1127 207 0 0 0 chr15 71153623 71153646 -32341328 + (ATG)n Simple_repeat Simple_repeat 2 24 0 1 1127 207 0 0 0 chr15 71153646 71153669 -32341305 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1 1127 1789 208 31 31 chr15 71153711 71154093 -32340881 - ORR1B1 LTR MaLR -12 382 1 1 1127 5080 68 0 0 chr15 71155046 71155693 -32339281 + L1Md_T LINE L1 5936 6582 0 1 1127 468 233 41 16 chr15 71155887 71156009 -32338965 + Lx8 LINE L1 7192 7316 -157 1 1127 468 0 0 0 chr15 71156018 71156070 -32338904 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1127 976 242 41 60 chr15 71156070 71156523 -32338451 + RLTR16 LTR ERVK 6 493 -12 1 1127 423 0 0 0 chr15 71156592 71156639 -32338335 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1127 270 0 0 0 chr15 71156930 71156960 -32338014 + (GA)n Simple_repeat Simple_repeat 2 31 0 1 1127 243 122 0 0 chr15 71157460 71157509 -32337465 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1127 383 88 18 0 chr15 71157531 71157588 -32337386 + HAL1-3A_ME LINE L1 1974 2031 -827 1 1127 1055 96 0 46 chr15 71157593 71157746 -32337228 - B1_Mm SINE Alu -1 146 1 1 1127 442 267 107 56 chr15 71158223 71158540 -32336434 + ORR1E LTR MaLR 1 353 -6 1 1127 239 364 82 16 chr15 71158969 71159212 -32335762 - L2 LINE L2 -978 2441 2183 2 1127 20493 180 12 45 chr15 71159219 71160143 -32334831 + L1_Mus4 LINE L1 559 1417 -4466 2 1127 5082 59 0 8 chr15 71160143 71160796 -32334178 + L1Md_F2 LINE L1 5933 6580 -2 2 1127 20493 160 11 106 chr15 71160796 71163410 -32331564 + L1_Mus4 LINE L1 1418 3859 -2024 2 1127 204 40 0 0 chr15 71163410 71163435 -32331539 + (CCA)n Simple_repeat Simple_repeat 2 26 0 2 1127 387 276 19 19 chr15 71163605 71163712 -32331262 + MTD LTR MaLR 10 116 -303 2 1127 1962 48 4 12 chr15 71163714 71163969 -32331005 - L1Md_F2 LINE L1 0 6582 6330 2 1127 20493 136 11 67 chr15 71163969 71166715 -32328259 + L1_Mus4 LINE L1 3860 6635 -1 2 1127 26 30 0 0 chr15 71167190 71167223 -32327751 + AT_rich Low_complexity Low_complexity 1 33 0 2 1127 548 270 71 104 chr15 71167747 71167958 -32327016 + MTEa LTR MaLR 176 379 0 2 1127 291 333 37 58 chr15 71168288 71168476 -32326498 + MIR SINE MIR 50 233 -29 2 1127 615 130 0 0 chr15 71168610 71168710 -32326264 + (TTCC)n Simple_repeat Simple_repeat 2 101 0 2 1127 3273 72 50 17 chr15 71168720 71169185 -32325789 + L1Md_F2 LINE L1 6091 6570 -12 2 1127 590 259 0 41 chr15 71169204 71169373 -32325601 - Lx6 LINE L1 -19 7441 7280 2 1127 378 0 0 0 chr15 71169374 71169416 -32325558 + (TAAAA)n Simple_repeat Simple_repeat 4 45 0 2 1127 529 219 38 156 chr15 71170200 71170411 -32324563 + MTE2a LTR MaLR 8 193 -186 2 1127 223 320 74 58 chr15 71170676 71170724 -32324250 - B2_Mm1t SINE B2 0 193 2 2 1127 524 309 35 14 chr15 71170724 71170865 -32324109 - RSINE1 SINE B4 -19 146 3 2 140 3992 40 17 0 chr15 71172057 71172531 -32322443 - L1_Mus1 LINE L1 0 6567 6086 2 1128 2176 229 98 24 chr15 71173030 71173164 -32321810 - Lx6 LINE L1 -185 7275 7117 2 1128 441 36 0 0 chr15 71173164 71173219 -32321755 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 1128 2176 229 98 24 chr15 71173219 71173715 -32321259 - Lx6 LINE L1 -344 7116 6598 2 1128 1281 205 7 3 chr15 71173848 71174142 -32320832 + Lx6 LINE L1 4996 5290 -590 2 1128 1024 228 180 60 chr15 71174164 71174581 -32320393 + Lx6 LINE L1 6977 7443 -17 2 1128 5198 211 50 10 chr15 71174584 71176228 -32318746 + Lx6 LINE L1 5281 6987 -473 2 1128 955 219 30 62 chr15 71176226 71176562 -32318412 + Lx6 LINE L1 7372 7696 0 2 1128 742 320 114 42 chr15 71176609 71177320 -32317654 + L1MD LINE L1 2686 3486 -2660 2 1128 585 42 0 0 chr15 71177320 71177392 -32317582 + (TA)n Simple_repeat Simple_repeat 1 72 0 2 1128 658 324 154 39 chr15 71177392 71177580 -32317394 + L1MD LINE L1 3487 3689 -2457 2 1128 22 35 0 0 chr15 71177677 71177706 -32317268 + AT_rich Low_complexity Low_complexity 1 29 0 2 1128 673 330 31 87 chr15 71177962 71178158 -32316816 + B3A SINE B2 1 185 -10 2 1128 30 0 0 0 chr15 71178379 71178409 -32316565 + AT_rich Low_complexity Low_complexity 1 30 0 2 1128 230 365 161 0 chr15 71179462 71179599 -32315375 + ID_B1 SINE B4 3 161 -63 2 1128 3783 152 123 94 chr15 71180157 71180950 -32314024 - RMER19B LTR ERVK 0 902 72 2 1128 1214 201 196 81 chr15 71180950 71181455 -32313519 + RMER2 LTR ERV1 1 563 -4 2 1128 3783 152 123 94 chr15 71181455 71181537 -32313437 - RMER19B LTR ERVK -831 71 1 2 1128 1035 326 40 35 chr15 71183984 71184590 -32310384 - Lx9 LINE L1 -153 7491 6883 2 1128 216 310 12 12 chr15 71185650 71185735 -32309239 + CT-rich Low_complexity Low_complexity 1 85 0 2 1128 595 289 11 17 chr15 71185799 71185975 -32308999 - B4A SINE B4 0 292 118 2 1128 275 222 0 87 chr15 71186352 71186421 -32308553 - ORR1E LTR MaLR -296 63 1 2 1128 21 0 0 0 chr15 71187291 71187312 -32307662 + AT_rich Low_complexity Low_complexity 1 21 0 2 1128 214 175 0 24 chr15 71187413 71187454 -32307520 + (TTG)n Simple_repeat Simple_repeat 2 41 0 2 1128 235 356 66 28 chr15 71187841 71188023 -32306951 - MIRb SINE MIR -5 263 75 2 1128 226 313 76 34 chr15 71188021 71188140 -32306834 - MIRb SINE MIR -119 149 26 2 1128 2938 161 167 3 chr15 71189689 71190263 -32304711 - RLTR33 LTR ERVK -10 668 1 2 1128 604 314 48 0 chr15 71190441 71190670 -32304304 - Lx8 LINE L1 -374 7099 6860 2 1128 7945 3 0 0 chr15 71192034 71192954 -32302020 - L1Md_A LINE L1 -1 6581 5662 2 1128 3600 174 18 0 chr15 71192977 71193648 -32301326 - Lx LINE L1 -32 6622 5940 2 1128 329 335 210 8 chr15 71193904 71194142 -32300832 + RMER15 LTR ERVL 276 561 -14 2 1128 1137 71 17 17 chr15 71194257 71194429 -32300545 - L1Md_F2 LINE L1 0 6582 6411 2 1128 2169 97 0 15 chr15 71194655 71194979 -32299995 - L1Md_F2 LINE L1 -2 6580 6262 2 1128 14405 170 113 80 chr15 71194991 71197263 -32297711 + L1_Mus4 LINE L1 551 2404 -3479 2 1128 648 38 0 0 chr15 71197263 71197342 -32297632 + (GAAAA)n Simple_repeat Simple_repeat 2 80 0 2 1128 14405 153 131 91 chr15 71197342 71200321 -32294653 + L1_Mus4 LINE L1 2405 6010 -626 2 1128 1000 118 12 0 chr15 71200321 71200490 -32294484 + L1_Mus4 LINE L1 6466 6636 0 2 1128 216 0 0 0 chr15 71200501 71200525 -32294449 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1128 273 98 0 0 chr15 71201217 71201258 -32293716 + (TTG)n Simple_repeat Simple_repeat 3 43 0 2 1128 1551 249 54 21 chr15 71201263 71201652 -32293322 + MTD LTR MaLR 18 419 0 2 1128 378 0 0 0 chr15 71203421 71203463 -32291511 + (TC)n Simple_repeat Simple_repeat 2 43 0 2 1128 438 20 0 0 chr15 71203463 71203513 -32291461 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1128 528 306 20 26 chr15 71203514 71203665 -32291309 - B3A SINE B2 -48 150 1 2 1128 627 266 52 16 chr15 71204048 71204236 -32290738 + B3 SINE B2 3 188 -7 2 1128 253 339 8 48 chr15 71204459 71204583 -32290391 + MLT1D LTR MaLR 99 217 -410 2 1128 283 292 105 53 chr15 71204647 71204799 -32290175 + MLT1D LTR MaLR 343 502 -3 2 1128 180 77 0 0 chr15 71205868 71205894 -32289080 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 2 1128 220 328 18 0 chr15 71209061 71209130 -32285844 + B1F1 SINE Alu 5 74 -43 2 1128 189 171 0 0 chr15 71209702 71209737 -32285237 + (TATG)n Simple_repeat Simple_repeat 2 36 0 2 1128 250 358 0 12 chr15 71210052 71210134 -32284840 + B4 SINE B4 3 83 -209 2 1128 201 188 78 19 chr15 71210430 71210533 -32284441 + (TA)n Simple_repeat Simple_repeat 2 110 0 2 1128 239 252 118 7 chr15 71210537 71210689 -32284285 + L1MD LINE L1 2237 2405 -3741 2 1128 261 350 8 48 chr15 71210692 71210818 -32284156 - RMER30 DNA MER1_type 0 202 82 2 1128 369 0 0 0 chr15 71210818 71210859 -32284115 + (TTTTTG)n Simple_repeat Simple_repeat 1 41 0 2 1128 279 54 0 0 chr15 71210857 71210894 -32284080 + (TGG)n Simple_repeat Simple_repeat 1 37 0 2 1128 804 173 0 0 chr15 71211698 71211848 -32283126 + GA-rich Low_complexity Low_complexity 3 152 0 2 1128 240 313 0 0 chr15 71212055 71212189 -32282785 + (CA)n Simple_repeat Simple_repeat 2 135 0 2 1128 303 49 0 0 chr15 71212571 71212612 -32282362 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1128 361 294 289 16 chr15 71212887 71213195 -32281779 - MER57C2 LTR ERV1 0 434 43 2 1128 252 0 0 0 chr15 71213261 71213289 -32281685 + (TC)n Simple_repeat Simple_repeat 2 29 0 2 1128 2072 125 39 34 chr15 71213331 71213712 -32281262 - Lx LINE L1 0 6654 6272 2 1128 728 43 0 0 chr15 71213714 71213806 -32281168 + L1_Mus4 LINE L1 5593 5684 -952 2 1128 560 298 88 12 chr15 71213857 71214538 -32280436 + L1MDb LINE L1 899 1628 -4874 2 1128 888 314 101 15 chr15 71214583 71214832 -32280142 - MTE2b LTR MaLR -12 367 99 2 1128 342 67 0 0 chr15 71214832 71214877 -32280097 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1128 888 314 101 15 chr15 71214877 71214963 -32280011 - MTE2b LTR MaLR -281 98 3 2 1128 1705 256 14 46 chr15 71215559 71216041 -32278933 + RMER1A Other Other 167 633 -397 2 1128 528 89 0 0 chr15 71216047 71216126 -32278848 + (GA)n Simple_repeat Simple_repeat 2 80 0 2 1128 2157 227 59 24 chr15 71216126 71216747 -32278227 - Lx6 LINE L1 -693 6365 5670 2 1128 1055 264 21 14 chr15 71216749 71217029 -32277945 + Lx6 LINE L1 7087 7368 -92 2 1128 231 61 0 0 chr15 71217029 71217062 -32277912 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1128 474 70 0 0 chr15 71217057 71217128 -32277846 + (TC)n Simple_repeat Simple_repeat 2 72 0 2 1128 336 183 8 32 chr15 71217208 71217234 -32277740 + polypurine Low_complexity Low_complexity 3 28 0 2 1128 1214 95 6 0 chr15 71217234 71217413 -32277561 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 1128 336 183 8 32 chr15 71217413 71217510 -32277464 + GA-rich Low_complexity Low_complexity 29 123 0 2 1128 490 314 16 0 chr15 71218315 71218439 -32276535 + B4A SINE B4 163 288 -4 2 1128 466 319 69 28 chr15 71218526 71218671 -32276303 + RSINE1 SINE B4 14 164 -1 2 1128 6166 128 27 6 chr15 71218880 71219880 -32275094 - Lx2 LINE L1 -1 6996 5976 2 1128 414 0 0 0 chr15 71219995 71220041 -32274933 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1128 3953 65 14 0 chr15 71220579 71221086 -32273888 - L1Md_F2 LINE L1 -1 6581 6068 2 1128 7060 84 1 22 chr15 71221069 71222051 -32272923 + L1Md_F2 LINE L1 5622 6582 0 2 1128 1017 65 0 0 chr15 71222071 71222210 -32272764 + L1Md_F2 LINE L1 5933 6071 -511 2 1128 424 324 160 10 chr15 71222341 71222547 -32272427 + RMER15 LTR ERVL 296 532 -43 2 1128 180 0 0 0 chr15 71222746 71222766 -32272208 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 2 1128 2559 174 26 45 chr15 71222906 71223478 -32271496 + RLTR31_Mm LTR ERVK 1 561 0 2 1128 279 0 0 0 chr15 71223481 71223512 -32271462 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1128 968 250 29 80 chr15 71224614 71225037 -32269937 + RLTR11B LTR ERVK 1 414 -27 2 1128 3771 100 13 11 chr15 71226765 71227322 -32267652 - L1_Mus3 LINE L1 -6 6632 6075 2 1128 234 143 0 0 chr15 71228285 71228334 -32266640 + (TTTG)n Simple_repeat Simple_repeat 1 49 0 2 1128 1245 48 0 0 chr15 71228334 71228481 -32266493 - B1_Mus1 SINE Alu -1 147 1 2 1128 180 125 0 0 chr15 71228520 71228552 -32266422 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2 1128 1281 305 81 26 chr15 71231187 71231793 -32263181 + Lx8 LINE L1 6701 7339 -134 2 1128 740 298 31 81 chr15 71232033 71232292 -32262682 - MTEa LTR MaLR -133 246 1 2 1128 326 301 78 35 chr15 71232963 71233104 -32261870 + L1M5 LINE L1 2464 2610 -3536 3 1128 455 304 150 32 chr15 71233192 71233813 -32261161 + L1MC LINE L1 2770 3487 -2659 3 1128 414 0 0 0 chr15 71233944 71233990 -32260984 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 3 1128 233 196 0 18 chr15 71234395 71234452 -32260522 + GA-rich Low_complexity Low_complexity 1 56 0 3 1128 27 49 0 0 chr15 71234622 71234663 -32260311 + AT_rich Low_complexity Low_complexity 1 41 0 3 1128 4940 62 0 1 chr15 71234668 71235348 -32259626 - L1Md_F2 LINE L1 -1733 4150 3472 3 1128 11194 53 0 0 chr15 71235343 71236801 -32258173 + L1Md_F2 LINE L1 4129 5586 -297 3 1128 7972 51 1 1 chr15 71236802 71237792 -32257182 + L1Md_F2 LINE L1 5588 6577 -5 3 1128 375 313 118 34 chr15 71238492 71238909 -32256065 - L1MB1 LINE L1 -279 5889 5438 3 1128 391 267 104 7 chr15 71239616 71239777 -32255197 - L1MB1 LINE L1 -1894 4252 4074 3 1128 247 300 20 0 chr15 71239803 71239903 -32255071 - L1MB1 LINE L1 -2465 3678 3577 3 1128 3267 53 0 0 chr15 71240394 71240810 -32254164 + L1Md_F2 LINE L1 5707 6122 -460 3 1128 8604 2 1 0 chr15 71240812 71242233 -32252741 - L1Md_A LINE L1 0 6582 5161 3 1128 15375 5 0 0 chr15 71242232 71244072 -32250902 + L1_Mm LINE L1 1792 3631 -2252 3 1128 3716 63 0 0 chr15 71244072 71244545 -32250429 + L1Md_F2 LINE L1 6109 6581 -1 3 1128 373 326 87 26 chr15 71244608 71244803 -32250171 + L1M5 LINE L1 4699 4905 -1241 3 1128 1570 31 16 0 chr15 71244961 71245155 -32249819 + L1Md_F3 LINE L1 6373 6569 -15 3 1128 240 398 0 0 chr15 71245218 71245311 -32249663 + PB1D10 SINE Alu 7 99 -18 3 1128 272 247 13 52 chr15 71245327 71245404 -32249570 + B3 SINE B2 10 83 -112 3 1128 228 243 0 14 chr15 71245516 71245587 -32249387 - Lx8 LINE L1 -1 7472 7403 3 1128 291 28 0 0 chr15 71245633 71245669 -32249305 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1128 22 35 0 0 chr15 71245726 71245755 -32249219 + AT_rich Low_complexity Low_complexity 1 29 0 3 1128 874 313 60 34 chr15 71245816 71246218 -32248756 + MTE2a LTR MaLR 1 419 0 3 1128 2778 83 24 52 chr15 71246439 71246858 -32248116 + MTB_Mm LTR MaLR 1 407 0 3 1128 6691 116 15 68 chr15 71246858 71248018 -32246956 + MTB_Mm-int LTR MaLR 1 1098 0 3 1128 999 91 0 0 chr15 71248020 71248152 -32246822 + MTB_Mm LTR MaLR 3 134 -266 3 1128 3644 124 7 28 chr15 71248154 71248733 -32246241 - RMER2 LTR ERV1 0 567 1 3 1128 1146 292 29 45 chr15 71249174 71249658 -32245316 - MuRRS4-int LTR ERV1 -1109 3954 3612 3 1128 243 0 0 0 chr15 71249724 71249751 -32245223 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1128 298 354 90 9 chr15 71250127 71250338 -32244636 - MuLV-int LTR ERV1 -3352 4254 4027 3 1128 1911 122 0 4 chr15 71250656 71250935 -32244039 + MTB_Mm LTR MaLR 130 407 0 3 1128 571 131 3 0 chr15 71251814 71251931 -32243043 + L1_Mur2 LINE L1 891 1010 -5325 3 1128 309 281 92 0 chr15 71252253 71252359 -32242615 + MTEa LTR MaLR 12 127 -252 3 1128 1377 162 121 25 chr15 71252498 71252650 -32242324 + L1_Mur2 LINE L1 902 1073 -6013 3 1128 2675 61 0 52 chr15 71252650 71253015 -32241959 - ORR1A1 LTR MaLR 0 346 1 3 1128 5286 177 57 25 chr15 71253015 71253974 -32241000 + L1_Mur2 LINE L1 1074 2055 -3822 3 1128 555 16 0 0 chr15 71253974 71254038 -32240936 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 1128 261 0 0 0 chr15 71254038 71254066 -32240908 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 1128 5286 182 34 25 chr15 71254066 71254481 -32240493 + L1_Mur2 LINE L1 2056 2479 -3398 3 1128 2196 200 54 5 chr15 71254479 71254927 -32240047 + Lx5 LINE L1 6397 6866 -184 3 1128 301 250 208 28 chr15 71254996 71255140 -32239834 + MER2 DNA MER2_type 99 268 -77 3 1128 6584 25 1 0 chr15 71255195 71255953 -32239021 - L1Md_F2 LINE L1 -12 6570 5812 3 1128 452 325 42 6 chr15 71257288 71257455 -32237519 + MER20 DNA MER1_type 1 173 -46 3 1128 1055 291 124 16 chr15 71258658 71259022 -32235952 - MTD LTR MaLR -2 417 15 3 1128 383 0 47 31 chr15 71259038 71259102 -32235872 + (CAAAAA)n Simple_repeat Simple_repeat 2 66 0 3 1128 382 175 50 0 chr15 71259725 71259805 -32235169 + MTD LTR MaLR 22 105 -316 3 1128 282 232 12 0 chr15 71259817 71259899 -32235075 + (TTA)n Simple_repeat Simple_repeat 1 83 0 3 1128 740 276 114 8 chr15 71259899 71260144 -32234830 + MTD LTR MaLR 135 405 -14 3 1128 228 345 136 54 chr15 71260618 71260802 -32234172 - MTEa LTR MaLR -16 363 165 3 1128 2304 37 0 0 chr15 71261200 71261473 -32233501 - L1_Mus1 LINE L1 -1 6566 6294 3 1128 630 24 12 0 chr15 71261973 71262058 -32232916 - L1Md_T LINE L1 -1 6581 6496 3 1128 212 188 21 0 chr15 71262305 71262353 -32232621 + T-rich Low_complexity Low_complexity 3 51 0 3 1128 268 316 127 104 chr15 71264187 71264399 -32230575 - MTEb LTR MaLR -162 217 1 3 1128 747 69 6 6 chr15 71264549 71264674 -32230300 - B1_Mus2 SINE Alu -23 126 2 3 1128 186 43 0 0 chr15 71264676 71264699 -32230275 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1128 236 30 30 0 chr15 71266235 71266268 -32228706 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 3 1128 1173 64 0 0 chr15 71266268 71266408 -32228566 - B1_Mus1 SINE Alu -8 140 1 3 1128 2262 201 27 5 chr15 71266665 71267109 -32227865 - RLTR17 LTR ERVK -73 619 166 3 1128 450 214 62 16 chr15 71267814 71267942 -32227032 - RLTR23 LTR ERV1 0 430 297 3 1128 27 62 0 0 chr15 71269064 71269112 -32225862 + AT_rich Low_complexity Low_complexity 1 48 0 3 1128 423 38 0 0 chr15 71270362 71270415 -32224559 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1128 1019 290 141 21 chr15 71271984 71272722 -32222252 + Lx8 LINE L1 6643 7468 -5 3 1128 204 164 32 32 chr15 71274032 71274095 -32220879 + (TA)n Simple_repeat Simple_repeat 1 63 0 3 1128 1085 184 18 22 chr15 71277230 71277453 -32217521 + URR1A DNA MER1_type 5 226 0 3 1128 189 107 0 0 chr15 71277783 71277811 -32217163 + (TCTG)n Simple_repeat Simple_repeat 2 29 0 3 1128 417 39 0 0 chr15 71277814 71277865 -32217109 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1128 689 310 6 0 chr15 71277871 71278029 -32216945 - B3A SINE B2 -34 164 6 3 1128 480 236 28 28 chr15 71278093 71278202 -32216772 + B1_Mur2 SINE Alu 40 148 -1 3 1128 252 0 0 0 chr15 71278904 71278932 -32216042 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1128 453 327 23 45 chr15 71281212 71281388 -32213586 - B4A SINE B4 -120 172 1 3 1128 478 361 63 0 chr15 71281746 71281984 -32212990 + MER2 DNA MER2_type 2 254 -91 3 1128 1120 62 14 7 chr15 71281984 71282129 -32212845 + B1_Mus1 SINE Alu 1 146 -2 3 1128 264 268 17 51 chr15 71282266 71282384 -32212590 + (CATA)n Simple_repeat Simple_repeat 2 115 0 3 1128 381 262 12 46 chr15 71282429 71282625 -32212349 - Lx8 LINE L1 -1716 5928 5736 3 1128 190 354 12 12 chr15 71283901 71283981 -32210993 - MIRc SINE MIR -130 138 59 3 1128 1639 245 72 13 chr15 71284818 71285189 -32209785 + MTD LTR MaLR 13 405 -14 3 1128 410 365 0 0 chr15 71286678 71286782 -32208192 - RSINE1 SINE B4 -33 132 29 3 1128 207 0 0 0 chr15 71288816 71288839 -32206135 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 3 1128 443 312 5 110 chr15 71289002 71289193 -32205781 - B3A SINE B2 -1 197 27 3 1128 321 47 0 0 chr15 71289193 71289236 -32205738 + (T)n Simple_repeat Simple_repeat 1 43 0 3 1128 1304 54 230 0 chr15 71289261 71289465 -32205509 - L1Md_T LINE L1 -2 6580 6330 3 1128 293 242 11 0 chr15 71289913 71290004 -32204970 + (TA)n Simple_repeat Simple_repeat 2 93 0 3 1128 21 36 0 0 chr15 71291690 71291718 -32203256 + AT_rich Low_complexity Low_complexity 1 28 0 3 1128 261 188 15 15 chr15 71292089 71292154 -32202820 + L1MC LINE L1 5751 5815 -2067 3 1128 222 230 0 47 chr15 71295049 71295113 -32199861 + CT-rich Low_complexity Low_complexity 1 61 0 3 1128 280 312 98 20 chr15 71296088 71296297 -32198677 - Lx7 LINE L1 -539 5758 5537 3 1128 533 181 67 59 chr15 71296710 71296845 -32198129 - RLTR17 LTR ERVK 0 692 557 3 1128 1373 168 11 19 chr15 71296836 71297097 -32197877 - RLTR17 LTR ERVK -336 356 98 3 1128 267 246 43 78 chr15 71297934 71298075 -32196899 + L1MC1 LINE L1 6180 6315 -18 3 1128 2411 158 107 25 chr15 71299181 71299669 -32195305 + RLTR11A LTR ERVK 1 528 0 3 1128 988 270 61 134 chr15 71299728 71300122 -32194852 + MTE2a LTR MaLR 1 365 -14 3 1128 540 0 0 0 chr15 71300546 71300606 -32194368 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 1128 408 40 0 0 chr15 71300606 71300655 -32194319 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1128 268 286 63 0 chr15 71301366 71301429 -32193545 + B1F1 SINE Alu 81 147 -2 3 1128 213 197 0 0 chr15 71301553 71301614 -32193360 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 1128 30 27 0 0 chr15 71301653 71301690 -32193284 + AT_rich Low_complexity Low_complexity 1 37 0 3 1128 303 28 0 0 chr15 71301787 71301823 -32193151 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 3 1128 327 104 0 0 chr15 71302892 71302940 -32192034 + (TCTG)n Simple_repeat Simple_repeat 1 48 0 3 1129 721 321 132 63 chr15 71303396 71303811 -32191163 + MLT2B3 LTR ERVL 83 526 -28 3 1129 705 333 5 40 chr15 71303721 71303943 -32191031 - B4A SINE B4 -76 216 3 3 1129 550 261 0 7 chr15 71303986 71304140 -32190834 + Lx9 LINE L1 7321 7473 -171 3 1129 252 0 0 0 chr15 71304158 71304186 -32190788 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1129 199 338 0 15 chr15 71305335 71305401 -32189573 + L2a LINE L2 3326 3390 -36 3 1129 965 257 75 99 chr15 71306346 71306730 -32188244 - MTE2a LTR MaLR -4 375 1 3 1129 1166 215 72 18 chr15 71306844 71307183 -32187791 + MTEa LTR MaLR 1 370 -9 3 1129 414 100 0 0 chr15 71307228 71307288 -32187686 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 1129 967 136 57 6 chr15 71307326 71307503 -32187471 - B2_Mm2 SINE B2 -2 193 8 3 1129 279 0 0 0 chr15 71307739 71307770 -32187204 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 3 1129 321 89 0 0 chr15 71312457 71312502 -32182472 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1129 803 270 184 16 chr15 71312708 71313028 -32181946 + MTE2b LTR MaLR 4 377 -2 3 1129 314 274 0 0 chr15 71314162 71314235 -32180739 + HAL1-3A_ME LINE L1 1976 2048 -810 3 1129 313 348 68 72 chr15 71314793 71315056 -32179918 + MER21B LTR ERV1 40 301 -562 4 1129 705 308 125 45 chr15 71315470 71315847 -32179127 + MER21B LTR ERV1 300 706 -157 4 1129 239 325 0 12 chr15 71316937 71317018 -32177956 + CT-rich Low_complexity Low_complexity 2 81 0 4 1129 460 325 102 39 chr15 71317236 71317492 -32177482 - B4A SINE B4 -18 274 3 4 1129 203 368 0 0 chr15 71317492 71317549 -32177425 - MIRc SINE MIR -114 154 98 4 1129 653 346 60 32 chr15 71317991 71318424 -32176550 + LTR31 LTR ERV1 173 617 -2 4 1129 462 18 0 0 chr15 71318893 71318948 -32176026 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 1129 405 0 0 0 chr15 71320502 71320547 -32174427 + (GA)n Simple_repeat Simple_repeat 1 45 0 4 1129 246 62 0 0 chr15 71320552 71320584 -32174390 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1129 186 245 0 20 chr15 71320886 71320936 -32174038 + L2a LINE L2 3378 3426 0 4 1129 2158 248 99 32 chr15 71322358 71323097 -32171877 - RMER1C Other Other -9 1333 546 4 1129 601 171 36 0 chr15 71323103 71323214 -32171760 + B1_Mur3 SINE Alu 34 148 -1 4 1129 2882 155 74 11 chr15 71323254 71323783 -32171191 + Lx4A LINE L1 6497 7058 0 4 1129 522 0 0 0 chr15 71323816 71323874 -32171100 + (GA)n Simple_repeat Simple_repeat 2 59 0 4 1129 1143 178 23 5 chr15 71324248 71324463 -32170511 + URR1A DNA MER1_type 8 226 0 4 1129 186 346 64 0 chr15 71325709 71325787 -32169187 - MIR SINE MIR -64 144 62 4 1129 180 152 0 0 chr15 71325856 71325889 -32169085 + GA-rich Low_complexity Low_complexity 2 34 0 4 1129 919 9 70 14 chr15 71326359 71326575 -32168399 + (TC)n Simple_repeat Simple_repeat 1 228 0 4 1129 333 0 0 0 chr15 71326575 71326612 -32168362 + (CTG)n Simple_repeat Simple_repeat 1 37 0 4 1129 292 200 82 41 chr15 71329065 71329138 -32165836 + ORR1E LTR MaLR 1 76 -303 4 1129 1098 120 17 6 chr15 71329228 71329404 -32165570 + B2_Mm2 SINE B2 4 181 -14 4 1129 314 319 99 86 chr15 71329413 71329646 -32165328 + ORR1E LTR MaLR 64 299 -60 4 1129 378 0 0 0 chr15 71330204 71330246 -32164728 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1129 197 297 53 13 chr15 71330751 71330826 -32164148 + MIR SINE MIR 65 142 -126 4 1129 1227 251 60 30 chr15 71330877 71331210 -32163764 + MTE2a LTR MaLR 37 379 0 4 1129 410 53 18 0 chr15 71332973 71333030 -32161944 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 1129 439 287 26 13 chr15 71333925 71334077 -32160897 + CT-rich Low_complexity Low_complexity 3 156 0 4 1129 264 30 0 0 chr15 71335398 71335431 -32159543 + (CAA)n Simple_repeat Simple_repeat 2 34 0 4 1129 1832 182 57 55 chr15 71336265 71336648 -32158326 + ORR1C2 LTR MaLR 1 384 0 4 1129 33 0 0 0 chr15 71336649 71336682 -32158292 + AT_rich Low_complexity Low_complexity 1 33 0 4 1129 222 220 32 48 chr15 71338259 71338321 -32156653 + MIRc SINE MIR 83 143 -125 4 1129 377 317 0 28 chr15 71338353 71338460 -32156514 + PB1D10 SINE Alu 1 104 -13 4 1129 693 66 0 0 chr15 71338516 71338607 -32156367 + (GAAA)n Simple_repeat Simple_repeat 2 92 0 4 1129 539 195 0 8 chr15 71338764 71338883 -32156091 + C-rich Low_complexity Low_complexity 6 123 0 4 1129 449 232 0 107 chr15 71339604 71339744 -32155230 + Lx9 LINE L1 5406 5530 -317 4 1129 1380 301 46 39 chr15 71339757 71340297 -32154677 - Lx9 LINE L1 -737 6907 6364 4 1129 728 273 26 42 chr15 71340308 71340572 -32154402 + Lx9 LINE L1 6916 7175 -469 4 1129 524 264 71 6 chr15 71340592 71340760 -32154214 + Lx9 LINE L1 7294 7472 -172 4 1129 216 97 0 0 chr15 71340768 71340799 -32154175 + (CAT)n Simple_repeat Simple_repeat 2 32 0 4 1129 2029 101 7 3 chr15 71340842 71341131 -32153843 + ORR1A2 LTR MaLR 38 327 0 4 1129 1204 247 80 16 chr15 71341153 71341605 -32153369 + Lx9 LINE L1 5532 6047 -1597 4 1129 246 271 35 23 chr15 71341670 71341757 -32153217 + Lx2B LINE L1 6890 6977 -23 4 1129 369 0 0 0 chr15 71341813 71341854 -32153120 + (CAGA)n Simple_repeat Simple_repeat 4 44 0 4 1129 441 0 0 0 chr15 71343931 71343980 -32150994 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 4 1129 1074 75 82 0 chr15 71343980 71344127 -32150847 - B2_Mm2 SINE B2 -34 161 3 4 1129 344 353 80 5 chr15 71344470 71344658 -32150316 + L1M3 LINE L1 4620 4821 -1322 4 1129 959 270 97 37 chr15 71344758 71345305 -32149669 + L1M3 LINE L1 4861 5450 -718 4 1129 387 0 0 0 chr15 71345744 71345787 -32149187 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1129 207 400 28 45 chr15 71345821 71345999 -32148975 - MIRm SINE MIR -45 231 57 4 1129 7196 59 2 30 chr15 71346156 71347097 -32147877 + L1_Mus1 LINE L1 5653 6567 0 4 1129 485 335 73 73 chr15 71349322 71349731 -32145243 + MLT2D LTR ERVL 5 413 -1 4 1129 598 259 25 69 chr15 71350566 71350764 -32144210 + Lx9 LINE L1 7284 7476 -168 4 1129 399 21 0 0 chr15 71350764 71350812 -32144162 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1129 598 259 25 69 chr15 71350812 71350858 -32144116 + Lx9 LINE L1 7477 7517 -127 4 1129 200 200 0 18 chr15 71350860 71350916 -32144058 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 4 1129 388 229 69 13 chr15 71350923 71351082 -32143892 + Lx9 LINE L1 7458 7625 -19 4 1129 1223 164 137 14 chr15 71351132 71351410 -32143564 - RMER1B Other Other -11 1055 744 4 1129 346 307 26 17 chr15 71352157 71352273 -32142701 - PB1D10 SINE Alu 0 117 1 4 1129 282 56 0 0 chr15 71353340 71353376 -32141598 + (CAT)n Simple_repeat Simple_repeat 2 37 0 4 1129 725 9 61 0 chr15 71354316 71354430 -32140544 + (TG)n Simple_repeat Simple_repeat 2 122 0 4 1129 234 333 24 49 chr15 71356620 71356702 -32138272 + L2c LINE L2 3270 3349 -38 4 1129 189 0 0 0 chr15 71356930 71356951 -32138023 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 4 1129 330 284 49 57 chr15 71358073 71358196 -32136778 - MER20 DNA MER1_type -5 214 93 4 1129 330 26 0 0 chr15 71358297 71358336 -32136638 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1129 360 0 0 0 chr15 71358884 71358924 -32136050 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1129 1103 270 81 107 chr15 71359921 71360306 -32134668 + MTE2a LTR MaLR 1 375 -4 4 1129 1497 37 21 16 chr15 71360326 71360517 -32134457 - L1Md_F3 LINE L1 -2 6582 6391 4 1129 452 293 15 89 chr15 71361115 71361317 -32133657 + MER102b DNA MER1_type 3 189 -152 4 1129 26 30 0 0 chr15 71361710 71361743 -32133231 + AT_rich Low_complexity Low_complexity 1 33 0 4 1129 26 30 0 0 chr15 71364160 71364193 -32130781 + AT_rich Low_complexity Low_complexity 1 33 0 4 1129 402 347 98 51 chr15 71364947 71365202 -32129772 + MLT1A0 LTR MaLR 99 365 0 4 1129 1142 243 67 17 chr15 71365358 71365655 -32129319 + ORR1D2 LTR MaLR 11 322 -48 4 1129 350 269 101 36 chr15 71366690 71366829 -32128145 + B1F SINE Alu 2 149 0 4 1129 270 275 0 24 chr15 71367112 71367194 -32127780 + GA-rich Low_complexity Low_complexity 4 83 0 4 1129 246 106 46 46 chr15 71368346 71368455 -32126519 + (TTTG)n Simple_repeat Simple_repeat 4 112 0 4 1129 24 0 0 0 chr15 71369941 71369965 -32125009 + AT_rich Low_complexity Low_complexity 1 24 0 4 1129 240 86 0 0 chr15 71370086 71370121 -32124853 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1129 324 70 0 0 chr15 71370241 71370284 -32124690 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 1129 2593 127 10 10 chr15 71370284 71370681 -32124293 - Lx2A1 LINE L1 -15 6993 6597 4 1129 390 145 0 0 chr15 71370923 71370985 -32123989 + ORR1B1 LTR MaLR 1 62 -332 4 1129 209 297 81 68 chr15 71371474 71371622 -32123352 + MIRb SINE MIR 27 176 -92 4 1129 195 42 0 0 chr15 71372053 71372077 -32122897 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1129 213 154 0 0 chr15 71372646 71372685 -32122289 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1129 334 197 76 0 chr15 71372691 71372757 -32122217 + HAL1-3A_ME LINE L1 1979 2049 -809 4 1129 410 332 112 60 chr15 71374388 71374673 -32120301 + ORR1E LTR MaLR 42 341 -18 4 1129 494 253 9 5 chr15 71377440 71377551 -32117423 + B3A SINE B2 2 108 -87 4 1129 433 147 0 21 chr15 71377844 71377927 -32117047 + (TA)n Simple_repeat Simple_repeat 2 83 0 4 1129 315 0 0 0 chr15 71377927 71377962 -32117012 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 1129 433 147 0 21 chr15 71377962 71377975 -32116999 + (TA)n Simple_repeat Simple_repeat 1 13 0 4 1129 322 319 92 23 chr15 71377978 71378151 -32116823 + L1M2 LINE L1 4197 4381 -1762 4 1129 2135 167 16 13 chr15 71378154 71378537 -32116437 + Lx LINE L1 6271 6654 0 4 1129 555 90 0 0 chr15 71378537 71378615 -32116359 + (GGAA)n Simple_repeat Simple_repeat 4 81 0 4 1129 500 319 27 81 chr15 71378617 71378876 -32116098 + MLT1B LTR MaLR 96 340 -50 4 1129 351 0 0 0 chr15 71378893 71378932 -32116042 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1129 953 302 97 22 chr15 71378936 71379471 -32115503 + L1M2 LINE L1 4416 4990 -1153 4 1129 237 356 112 23 chr15 71381213 71381472 -32113502 - L2a LINE L2 -125 3301 3020 4 1129 265 282 25 17 chr15 71381947 71382066 -32112908 + GA-rich Low_complexity Low_complexity 3 122 0 4 1129 737 320 115 56 chr15 71385926 71386429 -32108545 + MT2A LTR ERVL 1 533 0 4 1129 254 26 0 50 chr15 71390473 71390513 -32104461 + (TTTTTG)n Simple_repeat Simple_repeat 2 39 0 4 1129 229 200 0 146 chr15 71390594 71390653 -32104321 + RLTR13B3 LTR ERVK 532 578 -351 4 1129 762 266 0 11 chr15 71390653 71390839 -32104135 + RLTR28B LTR ERVL 1 184 -297 4 1129 254 297 27 118 chr15 71390866 71390909 -32104065 + RLTR28B LTR ERVL 271 314 -167 4 1129 194 0 0 37 chr15 71390909 71390936 -32104038 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 4 1129 254 297 27 118 chr15 71390936 71391079 -32103895 + RLTR28B LTR ERVL 315 440 -41 4 1129 207 0 0 0 chr15 71391889 71391912 -32103062 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 4 1129 192 77 0 0 chr15 71392674 71392700 -32102274 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1129 329 324 42 69 chr15 71392799 71392964 -32102010 + L1MD1 LINE L1 112 271 -6362 4 1129 387 0 0 0 chr15 71392964 71393007 -32101967 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1129 329 324 42 69 chr15 71393007 71393030 -32101944 + L1MD1 LINE L1 272 295 -6338 4 1129 405 0 0 0 chr15 71393386 71393431 -32101543 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1129 332 331 0 78 chr15 71393444 71393598 -32101376 + L1MD1 LINE L1 5279 5420 -1117 4 1129 3715 225 24 34 chr15 71393598 71394574 -32100400 + Lx7 LINE L1 6398 7363 -333 4 1129 243 61 0 0 chr15 71394633 71394666 -32100308 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1129 795 246 48 48 chr15 71394689 71394979 -32099995 + Lx7 LINE L1 7407 7696 0 4 1129 339 297 57 5 chr15 71395004 71395197 -32099777 + L1MD1 LINE L1 5429 5631 -906 4 1129 372 242 111 82 chr15 71396282 71396687 -32098287 + L1M3 LINE L1 4912 5328 -812 5 1129 298 279 77 38 chr15 71396842 71397025 -32097949 + L1M3 LINE L1 5407 5596 -716 5 1129 190 81 0 51 chr15 71397149 71397188 -32097786 + (GGA)n Simple_repeat Simple_repeat 2 38 0 5 1129 322 310 174 32 chr15 71397265 71397575 -32097399 + L1MD1 LINE L1 6233 6586 -47 4 1129 273 371 52 30 chr15 71397642 71397909 -32097065 + B4A SINE B4 2 274 -18 5 1129 333 0 0 0 chr15 71397973 71398010 -32096964 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1129 231 300 125 39 chr15 71398320 71398424 -32096550 + PB1D7 SINE Alu 3 115 -2 5 1129 1096 68 0 7 chr15 71398438 71398585 -32096389 + L1_Mus1 LINE L1 6258 6403 -164 5 1129 30 0 0 0 chr15 71398760 71398790 -32096184 + AT_rich Low_complexity Low_complexity 1 30 0 5 1129 931 242 73 77 chr15 71398910 71399316 -32095658 - MTE2a LTR MaLR -7 412 1 5 1129 270 171 0 0 chr15 71400901 71400971 -32094003 + (CAGAGA)n Simple_repeat Simple_repeat 3 72 0 5 1129 515 344 67 27 chr15 71400978 71401277 -32093697 + MLT1D LTR MaLR 183 493 -12 5 1129 295 282 14 78 chr15 71401386 71401528 -32093446 + ORR1C1 LTR MaLR 6 138 -240 5 1129 1365 161 180 30 chr15 71401784 71402118 -32092856 + ORR1C2 LTR MaLR 1 384 0 5 1129 195 239 0 0 chr15 71402593 71402660 -32092314 + (TGGA)n Simple_repeat Simple_repeat 4 70 0 5 1129 369 0 0 0 chr15 71403229 71403270 -32091704 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1129 513 0 0 0 chr15 71403270 71403326 -32091648 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 1129 308 303 128 40 chr15 71403459 71403607 -32091367 + MIRb SINE MIR 8 168 -100 5 1129 353 204 0 7 chr15 71404350 71404488 -32090486 + (TA)n Simple_repeat Simple_repeat 2 138 0 5 1129 230 227 0 0 chr15 71404621 71404665 -32090309 + GA-rich Low_complexity Low_complexity 3 46 0 5 1129 1373 244 80 46 chr15 71404678 71405164 -32089810 + Lx7 LINE L1 7101 7609 -87 5 1129 1176 75 0 0 chr15 71405164 71405311 -32089663 + B1_Mus2 SINE Alu 1 147 0 5 1129 1373 244 80 46 chr15 71405311 71405386 -32089588 + Lx7 LINE L1 7610 7681 -15 5 1129 1170 283 58 35 chr15 71405567 71405915 -32089059 - ORR1D2 LTR MaLR -9 361 6 5 1129 269 286 0 30 chr15 71406130 71406237 -32088737 + L1MEe LINE L1 1451 1584 -4540 5 1129 629 157 89 7 chr15 71406625 71406760 -32088214 - Lx2 LINE L1 -6 6991 6846 5 1129 456 242 16 24 chr15 71407279 71407402 -32087572 + Lx9 LINE L1 6744 6865 -779 5 1129 538 250 35 12 chr15 71407412 71407582 -32087392 + Lx7 LINE L1 7523 7696 0 5 1129 1149 286 91 35 chr15 71407605 71408319 -32086655 + Lx9 LINE L1 6890 7643 -1 5 1129 464 307 95 26 chr15 71408344 71408608 -32086366 + B4A SINE B4 5 286 -6 5 1129 242 308 106 53 chr15 71408873 71408986 -32085988 + MER63A DNA AcHobo 43 161 -49 5 1129 201 262 0 0 chr15 71409422 71409483 -32085491 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 5 1129 24 67 0 0 chr15 71409586 71409631 -32085343 + AT_rich Low_complexity Low_complexity 1 45 0 5 1129 858 287 60 60 chr15 71410052 71410531 -32084443 + Lx8 LINE L1 6970 7448 -25 5 1129 218 340 19 29 chr15 71410983 71411086 -32083888 + MIRb SINE MIR 46 147 -121 5 1129 1753 165 3 113 chr15 71412704 71413074 -32081900 + ORR1A4 LTR MaLR 1 329 0 5 1129 241 365 47 16 chr15 71413239 71413367 -32081607 + MIRc SINE MIR 33 164 -104 5 1129 450 0 0 0 chr15 71413500 71413550 -32081424 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 1129 593 139 9 0 chr15 71414508 71414616 -32080358 + (TC)n Simple_repeat Simple_repeat 2 110 0 5 1129 198 0 0 0 chr15 71415211 71415233 -32079741 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1129 36561 10 1 7 chr15 71415595 71420801 -32074173 + L1Md_A LINE L1 422 5586 -297 5 1129 8785 15 0 0 chr15 71420801 71421835 -32073139 + L1Md_A LINE L1 5587 6582 0 5 1129 244 238 0 23 chr15 71421859 71421945 -32073029 + (TG)n Simple_repeat Simple_repeat 1 84 0 5 1129 558 159 0 0 chr15 71422101 71422208 -32072766 + (TG)n Simple_repeat Simple_repeat 2 108 0 5 1129 259 260 0 20 chr15 71422277 71422375 -32072599 + (TG)n Simple_repeat Simple_repeat 1 96 0 5 1129 823 247 121 25 chr15 71422564 71422846 -32072128 - Lx8 LINE L1 -147 7326 7018 5 1129 317 340 22 1 chr15 71422849 71422982 -32071992 - MIRm SINE MIR -112 156 19 5 1129 188 250 127 38 chr15 71423323 71423402 -32071572 + MIR3 SINE MIR 77 162 -46 5 1129 450 0 0 0 chr15 71424608 71424658 -32070316 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1129 295 260 51 13 chr15 71426311 71426389 -32068585 + MTE2a LTR MaLR 60 140 -239 5 1129 283 340 59 63 chr15 71427534 71427852 -32067122 - ORR1E LTR MaLR -4 355 3 5 1129 378 0 0 0 chr15 71428327 71428369 -32066605 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1129 2331 75 3 54 chr15 71428369 71428719 -32066255 + IAPLTR1a_Mm LTR ERVK 1 332 -5 5 141 54638 17 3 6 chr15 71428719 71435214 -32059760 + IAPEz-int LTR ERVK 6 6481 0 5 1130 2331 75 3 54 chr15 71435214 71435564 -32059410 + IAPLTR1a_Mm LTR ERVK 1 332 -5 5 1130 450 0 0 0 chr15 71435565 71435615 -32059359 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1130 2942 41 3 0 chr15 71436699 71437044 -32057930 + ORR1A1 LTR MaLR 1 346 0 5 1130 7717 43 1 0 chr15 71437140 71438118 -32056856 - L1Md_F2 LINE L1 0 6582 5604 5 1130 697 229 109 22 chr15 71438209 71438392 -32056582 - MTD LTR MaLR 0 419 221 5 1130 278 319 67 93 chr15 71439898 71440122 -32054852 + B4 SINE B4 3 233 -59 5 1130 1240 55 0 0 chr15 71442106 71442252 -32052722 - B1_Mus1 SINE Alu -1 147 2 5 1130 185 257 187 19 chr15 71442506 71442613 -32052361 - MER5B DNA MER1_type -28 150 26 5 1130 263 328 89 40 chr15 71442698 71442824 -32052150 - MER5A DNA MER1_type -50 139 9 5 1130 419 209 9 0 chr15 71443098 71443213 -32051761 + GA-rich Low_complexity Low_complexity 1 116 0 5 1130 1999 290 35 60 chr15 71443743 71444561 -32050413 + Lx8 LINE L1 6676 7473 0 5 1130 987 273 0 9 chr15 71445279 71445490 -32049484 - B3 SINE B2 -7 209 1 5 1130 1928 290 42 10 chr15 71446046 71446641 -32048333 - Lx8 LINE L1 -447 7026 6413 5 1130 229 307 53 0 chr15 71446822 71446897 -32048077 + MTE-int LTR MaLR 1383 1461 -119 5 1130 606 148 0 0 chr15 71447090 71447205 -32047769 + (TC)n Simple_repeat Simple_repeat 1 115 0 5 1130 519 112 0 0 chr15 71447247 71447327 -32047647 + (TCTA)n Simple_repeat Simple_repeat 1 80 0 5 1130 575 250 61 24 chr15 71448112 71448276 -32046698 - Lx8 LINE L1 -1093 6380 6211 5 1130 545 261 24 51 chr15 71448284 71448537 -32046437 + MT2A LTR ERVL 132 539 -45 5 1130 1808 306 44 29 chr15 71449927 71450675 -32044299 + Lx9 LINE L1 6658 7416 -228 5 1130 486 75 0 0 chr15 71450675 71450742 -32044232 + (CA)n Simple_repeat Simple_repeat 2 68 0 5 1130 619 275 53 73 chr15 71451041 71451371 -32043603 + L1M2 LINE L1 5295 5635 -665 5 1130 360 0 0 0 chr15 71451376 71451416 -32043558 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1130 180 111 0 0 chr15 71451418 71451445 -32043529 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 5 1130 579 124 0 0 chr15 71451489 71451602 -32043372 + (TAGA)n Simple_repeat Simple_repeat 2 114 0 5 1130 1071 116 0 0 chr15 71451747 71451885 -32043089 + B1_Mus1 SINE Alu 2 139 -9 5 1130 229 0 83 0 chr15 71451885 71451921 -32043053 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1130 976 160 6 56 chr15 71451963 71452142 -32042832 - MTC LTR MaLR -3 418 249 5 1130 228 86 0 0 chr15 71452370 71452405 -32042569 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1130 243 59 29 0 chr15 71452702 71452736 -32042238 + (GGAA)n Simple_repeat Simple_repeat 2 36 0 5 1130 471 78 0 0 chr15 71452737 71452801 -32042173 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 1130 972 131 0 0 chr15 71452801 71452976 -32041998 + (GGAA)n Simple_repeat Simple_repeat 4 178 0 5 1130 195 42 0 0 chr15 71454358 71454382 -32040592 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1130 600 59 0 0 chr15 71454382 71454467 -32040507 + (CAGAGA)n Simple_repeat Simple_repeat 6 90 0 5 1130 262 197 0 38 chr15 71454472 71454551 -32040423 + GA-rich Low_complexity Low_complexity 2 77 0 5 1130 191 125 71 48 chr15 71455176 71455218 -32039756 + MER5A DNA MER1_type 147 189 0 5 1130 507 60 0 0 chr15 71456752 71456819 -32038155 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 1130 192 135 0 0 chr15 71457071 71457108 -32037866 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 5 1130 243 0 0 0 chr15 71458112 71458139 -32036835 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1130 3721 168 65 13 chr15 71458612 71459294 -32035680 + RMER6D LTR ERVK 4 720 0 5 1130 2001 230 44 44 chr15 71459711 71460279 -32034695 - L1_Mur3 LINE L1 -987 4893 4326 5 1130 642 258 16 63 chr15 71460277 71460467 -32034507 + Lx7 LINE L1 6500 6680 -1016 5 1130 305 293 97 8 chr15 71461295 71461419 -32033555 + L3 LINE CR1 4355 4489 0 5 1130 249 33 0 0 chr15 71462566 71462596 -32032378 + (TTG)n Simple_repeat Simple_repeat 1 30 0 5 1130 801 269 64 15 chr15 71463738 71463942 -32031032 - B3 SINE B2 0 216 3 5 1130 405 0 0 0 chr15 71464187 71464232 -32030742 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1130 978 241 5 19 chr15 71464307 71464514 -32030460 + B3 SINE B2 2 205 -11 5 1130 7808 45 1 1 chr15 71464573 71465521 -32029453 - L1Md_A LINE L1 0 6582 5661 5 1130 261 0 0 0 chr15 71467104 71467133 -32027841 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1130 645 49 0 0 chr15 71467133 71467213 -32027761 + (GA)n Simple_repeat Simple_repeat 2 82 0 5 1130 251 307 48 19 chr15 71467937 71468040 -32026934 + L2 LINE L2 2771 2876 -543 5 1130 397 228 30 0 chr15 71468051 71468152 -32026822 + L1MB5 LINE L1 5349 5452 -732 5 1130 1554 298 35 15 chr15 71468153 71468804 -32026170 + L1MC1 LINE L1 5317 5980 -353 5 1130 519 348 25 4 chr15 71468831 71469076 -32025898 + L1MC1 LINE L1 6061 6310 -23 5 1130 596 280 83 30 chr15 71469115 71469417 -32025557 + L1MB5 LINE L1 5447 5764 -410 5 1130 279 0 0 0 chr15 71469619 71469650 -32025324 + (TC)n Simple_repeat Simple_repeat 2 32 0 5 1130 232 324 40 48 chr15 71469689 71469916 -32025058 + L1MB5 LINE L1 5873 6097 -77 5 1130 420 276 192 60 chr15 71471508 71471774 -32023200 + RMER15 LTR ERVL 275 575 0 6 1130 193 250 41 14 chr15 71472448 71472521 -32022453 + MIRc SINE MIR 69 143 -125 6 1130 1313 76 6 6 chr15 71473670 71473842 -32021132 + L1_Mus1 LINE L1 6394 6565 -2 6 1130 779 222 79 141 chr15 71473979 71474383 -32020591 + MTE2a LTR MaLR 1 379 0 6 1130 604 235 59 24 chr15 71474546 71474716 -32020258 + MTC LTR MaLR 246 421 0 6 1130 1257 32 6 0 chr15 71474880 71475037 -32019937 + B2_Mm1a SINE B2 1 158 -35 6 1130 348 0 0 55 chr15 71475037 71475092 -32019882 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 6 1130 994 242 161 29 chr15 71475141 71475452 -32019522 + MTE2b LTR MaLR 27 378 -1 6 1130 930 277 131 45 chr15 71476458 71476511 -32018463 - MTD LTR MaLR 0 419 363 6 1130 927 186 23 23 chr15 71476511 71476687 -32018287 + B2_Mm2 SINE B2 2 177 -18 6 1130 930 277 131 45 chr15 71476687 71477015 -32017959 - MTD LTR MaLR -57 362 5 6 1130 938 226 32 23 chr15 71477849 71478066 -32016908 - URR1B DNA MER1_type 0 225 7 6 1130 310 319 146 81 chr15 71478883 71479204 -32015770 + MLT1A LTR MaLR 33 374 0 6 1130 8375 7 1 1 chr15 71479828 71480784 -32014190 + L1Md_A LINE L1 24 979 -5745 6 1130 36273 34 0 0 chr15 71480784 71486541 -32008433 + L1Md_T LINE L1 1 5589 -297 6 1130 9596 5 0 0 chr15 71486541 71487557 -32007417 + L1Md_T LINE L1 5590 6585 0 6 1130 39393 5 0 0 chr15 71487557 71492180 -32002794 + L1Md_A LINE L1 964 5586 -297 6 1130 9629 3 0 0 chr15 71492180 71493176 -32001798 + L1Md_A LINE L1 5587 6582 0 6 1130 199 345 46 108 chr15 71494549 71494679 -32000295 - MIRm SINE MIR -135 141 20 6 1130 926 154 39 0 chr15 71495806 71495962 -31999012 - Lx4B LINE L1 -644 6414 6253 6 1130 677 173 115 35 chr15 71495966 71496140 -31998834 + Lx4B LINE L1 6850 7037 -21 6 1130 1335 34 6 22 chr15 71496140 71496323 -31998651 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 6 1130 480 163 0 0 chr15 71496323 71496409 -31998565 + A-rich Low_complexity Low_complexity 4 89 0 6 1130 207 262 0 0 chr15 71496746 71496788 -31998186 + polypyrimidine Low_complexity Low_complexity 1 42 0 6 1130 257 235 0 12 chr15 71497614 71497700 -31997274 + (CA)n Simple_repeat Simple_repeat 2 86 0 6 1130 360 135 0 0 chr15 71497709 71497761 -31997213 + HAL1-3A_ME LINE L1 1976 2027 -831 6 1130 849 280 40 136 chr15 71498279 71498676 -31996298 - MTE2a LTR MaLR -15 364 6 6 1130 288 0 0 0 chr15 71498758 71498790 -31996184 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 6 1130 363 23 0 0 chr15 71499262 71499306 -31995668 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1130 349 76 30 0 chr15 71499768 71499834 -31995140 + (TTTTTG)n Simple_repeat Simple_repeat 2 69 0 6 1130 194 282 171 34 chr15 71500704 71500792 -31994182 - L2a LINE L2 -7 3419 3320 1 1130 314 318 69 52 chr15 71502393 71502741 -31992233 + L1ME3A LINE L1 5743 6096 -77 2 1130 714 230 0 41 chr15 71502783 71502928 -31992046 - B1F SINE Alu -1 148 10 3 1130 30 0 0 0 chr15 71502947 71502977 -31991997 + AT_rich Low_complexity Low_complexity 1 30 0 4 1130 829 321 36 18 chr15 71503132 71503639 -31991335 + L1MA4 LINE L1 5079 5609 -691 5 1130 268 23 44 22 chr15 71503639 71503684 -31991290 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 6 1130 829 330 41 16 chr15 71503684 71503955 -31991019 + L1MA4 LINE L1 5610 5880 -420 5 1130 23 0 0 0 chr15 71503956 71503979 -31990995 + AT_rich Low_complexity Low_complexity 1 23 0 7 1130 27 29 0 0 chr15 71504192 71504226 -31990748 + AT_rich Low_complexity Low_complexity 1 34 0 8 1130 226 162 29 48 chr15 71504315 71504419 -31990555 + (TGAG)n Simple_repeat Simple_repeat 1 102 0 9 1130 181 410 0 0 chr15 71505572 71505633 -31989341 + L2c LINE L2 3101 3161 -226 1 1130 211 305 116 120 chr15 71505646 71505888 -31989086 - L2c LINE L2 -5 3382 3142 1 1130 699 95 0 0 chr15 71506542 71506647 -31988327 + (TG)n Simple_repeat Simple_repeat 2 106 0 1 1130 186 103 0 0 chr15 71506850 71506879 -31988095 + (G)n Simple_repeat Simple_repeat 1 29 0 1 1130 384 340 81 44 chr15 71507526 71507797 -31987177 - MLT1G3 LTR MaLR -299 296 16 1 1130 205 277 132 93 chr15 71507798 71507949 -31987025 + MIRc SINE MIR 23 179 -89 1 1130 320 315 9 18 chr15 71509651 71509761 -31985213 - MIRb SINE MIR -97 171 63 1 1130 640 191 9 0 chr15 71510559 71510664 -31984310 + B1_Mur3 SINE Alu 4 109 -40 1 1130 22 0 0 0 chr15 71511628 71511650 -31983324 + AT_rich Low_complexity Low_complexity 1 22 0 1 1130 289 382 59 26 chr15 71511884 71512037 -31982937 + MIR SINE MIR 40 197 -65 1 1130 197 433 14 7 chr15 71512345 71512487 -31982487 + MIR3 SINE MIR 1 143 -65 2 1130 525 335 95 16 chr15 71513259 71513511 -31981463 - MER31B LTR ERV1 -52 414 143 2 1130 662 233 142 0 chr15 71513511 71513730 -31981244 - Lx9 LINE L1 -1042 6602 6353 2 1130 323 171 53 23 chr15 71513730 71513862 -31981112 + Lx9 LINE L1 7509 7644 0 2 1130 283 280 21 11 chr15 71513910 71514004 -31980970 - MER31B LTR ERV1 -388 97 3 2 1130 356 0 23 0 chr15 71515474 71515518 -31979456 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1130 410 392 50 13 chr15 71515710 71516090 -31978884 - L2 LINE L2 -352 3067 2674 2 1130 24 0 0 0 chr15 71516615 71516639 -31978335 + AT_rich Low_complexity Low_complexity 1 24 0 2 1130 25 0 0 0 chr15 71516664 71516689 -31978285 + AT_rich Low_complexity Low_complexity 1 25 0 2 1130 291 69 16 49 chr15 71517578 71517589 -31977385 + (TAAAA)n Simple_repeat Simple_repeat 2 12 0 2 1130 889 55 150 0 chr15 71517589 71517716 -31977258 + B1_Mus1 SINE Alu 1 146 -2 2 1130 291 69 16 49 chr15 71517716 71517765 -31977209 + (TAAAA)n Simple_repeat Simple_repeat 3 50 0 3 1130 294 294 16 14 chr15 71517799 71517962 -31977012 + L1P5 LINE L1 5320 5484 -816 3 1130 235 225 115 85 chr15 71517980 71518145 -31976829 + Lx8 LINE L1 7304 7473 0 3 1130 294 95 0 0 chr15 71518165 71518207 -31976767 + (GGGGA)n Simple_repeat Simple_repeat 5 46 0 3 1130 201 325 65 57 chr15 71518372 71518496 -31976478 + L2a LINE L2 3289 3413 -13 3 1130 265 284 287 5 chr15 71518865 71519067 -31975907 + Lx8 LINE L1 7215 7473 0 3 1130 351 0 0 0 chr15 71519077 71519116 -31975858 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 1130 425 325 122 4 chr15 71519455 71519693 -31975281 - MER2 DNA MER2_type -76 269 4 3 1130 327 276 38 0 chr15 71519774 71519879 -31975095 + GA-rich Low_complexity Low_complexity 5 113 0 3 1130 1075 276 81 51 chr15 71521506 71521899 -31973075 - MTD LTR MaLR -14 405 1 3 1130 23 0 0 0 chr15 71521976 71521999 -31972975 + AT_rich Low_complexity Low_complexity 1 23 0 4 1130 669 314 68 39 chr15 71522004 71522028 -31972946 + MLT2B4 LTR ERVL 13 35 -521 4 1130 1630 146 28 169 chr15 71522028 71522489 -31972485 + RMER10B LTR ERVL 1 396 -2 4 1130 669 314 68 39 chr15 71522489 71522775 -31972199 + MLT2B4 LTR ERVL 36 332 -224 4 1130 247 325 74 29 chr15 71522869 71523246 -31971728 - L1MC LINE L1 -792 5354 4961 4 1130 723 301 86 53 chr15 71523246 71523616 -31971358 - MTE2a LTR MaLR 0 379 26 4 1130 1158 268 65 4 chr15 71523638 71524096 -31970878 - L1MC LINE L1 -1181 4965 4480 4 1130 180 111 0 0 chr15 71524126 71524153 -31970821 + (TA)n Simple_repeat Simple_repeat 1 27 0 4 1130 303 297 0 0 chr15 71524169 71524280 -31970694 - L1MC LINE L1 -1754 4392 4282 4 1130 23 0 0 0 chr15 71524342 71524365 -31970609 + AT_rich Low_complexity Low_complexity 1 23 0 4 1130 3720 165 16 9 chr15 71524852 71525544 -31969430 + Lx4A LINE L1 5946 6642 -416 4 1130 1372 168 42 23 chr15 71525550 71525812 -31969162 + Lx4A LINE L1 6792 7058 0 4 1130 198 0 0 0 chr15 71525885 71525907 -31969067 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 1130 222 326 154 39 chr15 71526318 71526500 -31968474 + MIRc SINE MIR 7 209 -59 4 1130 185 253 12 118 chr15 71528132 71528217 -31966757 - MIRb SINE MIR -59 209 134 5 1130 191 239 0 42 chr15 71528620 71528668 -31966306 + MIR SINE MIR 210 255 -7 4 1130 234 182 0 0 chr15 71528634 71528678 -31966296 + L2b LINE L2 3330 3373 -2 5 1130 1114 269 115 18 chr15 71529238 71529621 -31965353 + RLTR20C LTR ERVK 49 468 -66 5 1130 183 129 0 0 chr15 71530557 71530588 -31964386 + (TTG)n Simple_repeat Simple_repeat 2 32 0 5 1130 22 35 0 0 chr15 71530711 71530740 -31964234 + AT_rich Low_complexity Low_complexity 1 29 0 5 1130 572 299 22 0 chr15 71530950 71531087 -31963887 + MER58A DNA MER1_type 35 174 -50 5 1130 317 277 39 10 chr15 71532134 71532236 -31962738 + MIR SINE MIR 123 227 -35 5 1130 465 76 0 0 chr15 71533877 71533943 -31961031 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 1130 22 0 0 0 chr15 71533986 71534008 -31960966 + AT_rich Low_complexity Low_complexity 1 22 0 5 1130 234 0 0 0 chr15 71534523 71534549 -31960425 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1130 553 242 158 6 chr15 71535161 71535319 -31959655 + B3A SINE B2 1 182 -16 6 1130 402 132 0 0 chr15 71535325 71535401 -31959573 + (TC)n Simple_repeat Simple_repeat 2 77 0 6 1130 192 40 0 0 chr15 71535401 71535426 -31959548 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 1130 288 327 99 23 chr15 71538885 71539057 -31955917 - MER3 DNA MER1_type -19 190 6 6 1130 358 298 0 130 chr15 71539514 71539645 -31955329 - PB1D10 SINE Alu -3 114 1 6 1130 522 31 0 0 chr15 71542306 71542370 -31952604 + (CAGCC)n Simple_repeat Simple_repeat 4 67 0 6 1130 268 312 94 13 chr15 71543254 71543410 -31951564 + MIRc SINE MIR 71 237 -31 6 1130 562 310 6 117 chr15 71543498 71543823 -31951151 + B4A SINE B4 4 292 0 6 1130 191 217 17 0 chr15 71543826 71543886 -31951088 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 1130 851 281 174 41 chr15 71544285 71544928 -31950046 + L1MC1 LINE L1 5478 6200 -133 6 1130 915 73 0 0 chr15 71545129 71545253 -31949721 + (TG)n Simple_repeat Simple_repeat 2 125 0 7 1130 401 0 20 0 chr15 71546840 71546889 -31948085 + (TTA)n Simple_repeat Simple_repeat 2 51 0 7 1130 755 284 24 9 chr15 71547102 71547315 -31947659 + B3 SINE B2 1 216 0 7 1130 583 237 117 16 chr15 71548010 71548259 -31946715 - Lx9 LINE L1 -2 7642 7369 7 1130 378 0 0 0 chr15 71548846 71548888 -31946086 + (TCC)n Simple_repeat Simple_repeat 2 43 0 7 1130 1017 153 0 0 chr15 71548888 71549064 -31945910 + CT-rich Low_complexity Low_complexity 2 177 0 7 1130 270 0 0 0 chr15 71549379 71549409 -31945565 + (TTG)n Simple_repeat Simple_repeat 1 30 0 7 1130 493 261 98 72 chr15 71550767 71551072 -31943902 - Lx8 LINE L1 -9 7464 7152 7 1130 192 125 0 0 chr15 71551606 71551638 -31943336 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 1130 22 0 0 0 chr15 71552528 71552550 -31942424 + AT_rich Low_complexity Low_complexity 1 22 0 7 1130 180 250 0 19 chr15 71552637 71552690 -31942284 - L2b LINE L2 0 3375 3324 8 1130 189 292 154 0 chr15 71554618 71554683 -31940291 - MIR3 SINE MIR -23 185 111 8 1130 253 261 9 9 chr15 71554791 71554907 -31940067 + CT-rich Low_complexity Low_complexity 1 116 0 8 1130 491 43 0 14 chr15 71555266 71555337 -31939637 + (GA)n Simple_repeat Simple_repeat 1 70 0 8 1130 229 277 91 57 chr15 71555806 71555982 -31938992 - L2c LINE L2 -23 3364 3183 8 1130 294 328 46 20 chr15 71556711 71556846 -31938128 - MIRc SINE MIR -120 142 1 8 1130 201 74 0 0 chr15 71558301 71558328 -31936646 + (CCG)n Simple_repeat Simple_repeat 1 27 0 8 1130 439 325 8 0 chr15 71560336 71560459 -31934515 - ID_B1 SINE B4 -12 212 89 8 1130 1059 249 18 115 chr15 71560773 71561173 -31933801 + MTE2a LTR MaLR 19 379 0 8 1130 294 363 83 74 chr15 71561654 71561978 -31932996 + MamGypLTR3 LTR Gypsy 380 706 -133 8 1130 414 0 0 0 chr15 71562107 71562153 -31932821 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1130 846 258 0 0 chr15 71562328 71562483 -31932491 - B3 SINE B2 -57 159 5 9 1130 1006 81 0 14 chr15 71562476 71562614 -31932360 - B2_Mm2 SINE B2 -58 137 2 9 1130 523 296 52 6 chr15 71563027 71563200 -31931774 + Lx6 LINE L1 7268 7448 -12 9 1130 720 271 70 0 chr15 71563323 71563522 -31931452 - B3 SINE B2 0 216 4 9 1130 262 335 134 13 chr15 71563899 71564056 -31930918 - MER20 DNA MER1_type -7 212 37 9 1130 1166 225 147 13 chr15 71564234 71564540 -31930434 + MTD LTR MaLR 72 418 -1 9 1130 190 111 0 0 chr15 71564734 71564761 -31930213 - MIR SINE MIR -122 140 114 9 1130 22 0 0 0 chr15 71565115 71565137 -31929837 + AT_rich Low_complexity Low_complexity 1 22 0 9 1131 411 342 127 71 chr15 71565956 71566547 -31928427 - L1ME3B LINE L1 -352 5888 5265 9 1131 288 0 0 0 chr15 71566755 71566787 -31928187 + (TG)n Simple_repeat Simple_repeat 2 33 0 9 1131 1161 89 0 0 chr15 71567266 71567628 -31927346 + (TG)n Simple_repeat Simple_repeat 1 362 0 1 1131 1137 84 0 0 chr15 71567642 71568086 -31926888 + (TG)n Simple_repeat Simple_repeat 1 444 0 1 1131 1554 60 2 0 chr15 71568107 71568637 -31926337 + (TG)n Simple_repeat Simple_repeat 1 531 0 1 1131 416 337 122 50 chr15 71569052 71569090 -31925884 - L1ME3B LINE L1 -1803 4343 4303 9 1131 689 298 108 21 chr15 71569090 71569423 -31925551 - MLT1A0 LTR MaLR -2 363 2 1 1131 416 337 122 50 chr15 71569423 71570161 -31924813 - L1ME3B LINE L1 -1844 4302 3512 9 1131 464 0 18 0 chr15 71570542 71570598 -31924376 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 1 1131 331 266 38 0 chr15 71570923 71571002 -31923972 + Lx8 LINE L1 7027 7108 -365 1 1131 906 285 26 73 chr15 71571230 71571533 -31923441 + B4A SINE B4 4 292 0 1 1131 339 228 0 0 chr15 71571534 71571626 -31923348 + (CA)n Simple_repeat Simple_repeat 1 92 0 1 1131 191 349 35 35 chr15 71573065 71573178 -31921796 - MIRb SINE MIR -90 178 66 1 1131 405 0 0 0 chr15 71573256 71573301 -31921673 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 1 1131 927 321 33 4 chr15 71573382 71573654 -31921320 - MTE2b LTR MaLR -59 320 41 1 1131 221 0 35 0 chr15 71576707 71576736 -31918238 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1 1131 5510 68 0 0 chr15 71576740 71577404 -31917570 - L1Md_F2 LINE L1 0 6582 5919 1 1131 351 0 0 0 chr15 71577707 71577746 -31917228 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1131 993 164 223 60 chr15 71580369 71580687 -31914287 + ORR1D2 LTR MaLR 1 370 0 1 1131 2768 33 0 0 chr15 71581078 71581385 -31913589 + L1Md_T LINE L1 6275 6581 -1 1 1131 570 160 58 23 chr15 71581445 71581618 -31913356 + CT-rich Low_complexity Low_complexity 2 180 0 1 1131 264 340 98 80 chr15 71582896 71583120 -31911854 - MLT1H LTR MaLR -109 440 213 1 1131 695 286 5 52 chr15 71583124 71583316 -31911658 + B3A SINE B2 1 183 -15 1 1131 253 362 0 0 chr15 71583368 71583448 -31911526 - MLT1H LTR MaLR -338 151 72 1 1131 210 295 105 35 chr15 71583987 71584010 -31910964 - B2_Mm1a SINE B2 -9 184 1 1 1131 491 318 54 7 chr15 71584010 71584159 -31910815 - RSINE1 SINE B4 -8 157 2 1 1131 3610 81 14 0 chr15 71584539 71584982 -31909992 + L1_Mus1 LINE L1 6117 6565 -2 1 1131 246 330 21 11 chr15 71585181 71585276 -31909698 - LTR37B LTR ERV1 -174 294 199 1 1131 2643 198 25 113 chr15 71585808 71586496 -31908478 + RMER20B LTR ERVK 1 627 0 1 1131 212 200 0 22 chr15 71586563 71586609 -31908365 + (TATATG)n Simple_repeat Simple_repeat 6 50 0 1 1131 4563 152 66 69 chr15 71588331 71589235 -31905739 - RMER19B LTR ERVK 0 902 1 1 1131 322 345 145 66 chr15 71589256 71589712 -31905262 + MLT1D LTR MaLR 14 505 0 1 1131 394 297 65 115 chr15 71590105 71590322 -31904652 + RLTR25A LTR ERVK 3 208 -895 1 1131 974 239 71 62 chr15 71590383 71590776 -31904198 - RMER19C LTR ERVK -199 412 1 1 1131 636 164 8 8 chr15 71591193 71591322 -31903652 - Lx2B LINE L1 -5 6995 6867 1 1131 184 202 20 41 chr15 71592365 71592463 -31902511 + GA-rich Low_complexity Low_complexity 6 101 0 1 1131 269 279 53 29 chr15 71594399 71594540 -31900434 + MIR3 SINE MIR 43 196 -72 1 1131 1274 134 119 0 chr15 71594978 71595180 -31899794 - URR1A DNA MER1_type 0 226 1 1 1131 243 305 68 38 chr15 71595228 71595361 -31899613 + MLT1D LTR MaLR 367 503 -2 1 1131 183 234 0 21 chr15 71595387 71595435 -31899539 - MIRm SINE MIR -133 143 97 1 1131 352 321 73 56 chr15 71595690 71595924 -31899050 - MLT1E3 LTR MaLR -9 615 378 1 1131 1675 85 0 0 chr15 71597498 71597709 -31897265 - L1_Mus1 LINE L1 0 6567 6357 1 1131 1900 71 0 4 chr15 71597709 71597949 -31897025 + L1_Mus1 LINE L1 6128 6366 -201 1 1131 240 340 61 49 chr15 71598268 71598432 -31896542 + MLT1H LTR MaLR 84 249 -300 1 1131 198 340 0 0 chr15 71598476 71598529 -31896445 - L2c LINE L2 -55 3332 3280 1 1131 239 269 85 129 chr15 71598649 71598850 -31896124 + Lx9 LINE L1 5835 6026 -1618 1 1131 410 65 16 0 chr15 71598987 71599049 -31895925 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 1131 225 0 0 0 chr15 71599049 71599074 -31895900 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1131 3605 298 50 16 chr15 71599078 71600305 -31894669 + Lx9 LINE L1 6341 7609 -35 1 1131 23 33 0 0 chr15 71601414 71601444 -31893530 + AT_rich Low_complexity Low_complexity 1 30 0 1 1131 2063 272 55 15 chr15 71601619 71602202 -31892772 - Lx7 LINE L1 -389 7307 6702 1 1131 426 232 66 54 chr15 71602229 71602423 -31892551 - Lx6 LINE L1 0 7696 7370 1 1131 367 343 63 35 chr15 71602693 71602980 -31891994 + L2 LINE L2 2562 2856 -563 1 1131 1080 341 26 35 chr15 71604106 71604614 -31890360 - Lx8 LINE L1 0 7473 6971 1 1131 444 232 63 0 chr15 71605258 71605353 -31889621 + ID_B1 SINE B4 87 187 -37 1 1131 718 342 15 0 chr15 71605351 71605550 -31889424 + B3 SINE B2 9 210 -6 1 1131 308 293 159 55 chr15 71606375 71606595 -31888379 + L1M5 LINE L1 3591 3833 -2313 1 1131 297 0 0 0 chr15 71607066 71607099 -31887875 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 1131 309 292 0 0 chr15 71607103 71607175 -31887799 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 1131 192 40 0 0 chr15 71608846 71608871 -31886103 + (TTTTA)n Simple_repeat Simple_repeat 4 28 0 1 1131 482 294 158 6 chr15 71608873 71609044 -31885930 - B3 SINE B2 -19 197 1 1 1131 258 323 0 0 chr15 71609102 71609167 -31885807 + polypurine Low_complexity Low_complexity 1 65 0 1 1131 539 325 104 40 chr15 71610448 71610698 -31884276 - MLT1E1A LTR MaLR -85 595 330 1 1131 587 339 104 34 chr15 71611097 71611482 -31883492 + LTR53 LTR ERVL 94 505 -14 1 1131 346 322 16 8 chr15 71612039 71612161 -31882813 + LTR53 LTR ERVL 189 311 -208 1 1131 3180 261 82 13 chr15 71612686 71613702 -31881272 + Lx8 LINE L1 6332 7417 -56 1 1131 413 116 14 0 chr15 71614024 71614093 -31880881 + (GA)n Simple_repeat Simple_repeat 2 71 0 1 1131 498 174 0 0 chr15 71614767 71614876 -31880098 + GA-rich Low_complexity Low_complexity 1 109 0 1 1131 219 69 0 0 chr15 71615022 71615051 -31879923 + (CAGG)n Simple_repeat Simple_repeat 2 30 0 1 1131 2382 169 70 7 chr15 71616724 71617170 -31877804 - Lx3C LINE L1 -2 6974 6501 1 1131 259 27 27 0 chr15 71617170 71617207 -31877767 - Lx3C LINE L1 -570 6406 6369 1 1131 266 0 29 0 chr15 71617210 71617244 -31877730 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1131 709 269 34 26 chr15 71617249 71617511 -31877463 - L1_Mur3 LINE L1 -466 5414 5181 1 1131 828 292 61 53 chr15 71617506 71617918 -31877056 + Lx8 LINE L1 5853 6267 -1206 1 1131 2042 316 64 20 chr15 71617918 71618825 -31876149 + Lx8 LINE L1 6374 7320 -153 1 1131 567 0 0 0 chr15 71618850 71618913 -31876061 + (GGA)n Simple_repeat Simple_repeat 3 65 0 1 1131 6535 37 16 1 chr15 71618966 71619752 -31875222 - L1Md_F3 LINE L1 -14 6570 5773 1 1131 483 299 28 7 chr15 71619777 71619922 -31875052 - MTEa LTR MaLR -231 148 1 1 1131 326 264 48 36 chr15 71620707 71620872 -31874102 + MER96B DNA hAT 85 251 -166 1 1131 663 288 78 89 chr15 71621172 71621320 -31873654 - MTE2a LTR MaLR -13 366 204 1 1131 893 80 0 116 chr15 71621320 71621475 -31873499 + B1_Mm SINE Alu 1 137 -10 1 1131 296 60 40 0 chr15 71621475 71621525 -31873449 + (CAAA)n Simple_repeat Simple_repeat 2 53 0 1 1131 663 288 78 89 chr15 71621525 71621745 -31873229 - MTE2a LTR MaLR -176 203 2 1 1131 7589 43 3 2 chr15 71623388 71624299 -31870675 + L1Md_F2 LINE L1 5671 6582 0 1 1131 242 125 274 48 chr15 71624870 71624954 -31870020 + URR1B DNA MER1_type 123 225 0 1 1131 231 275 97 22 chr15 71626225 71626359 -31868615 + L1MC1 LINE L1 5291 5434 -910 1 1131 1272 282 103 11 chr15 71626433 71627007 -31867967 + L1MC1 LINE L1 5691 6317 -27 1 1131 23 0 0 0 chr15 71627022 71627045 -31867929 + AT_rich Low_complexity Low_complexity 1 23 0 1 1131 333 0 0 0 chr15 71627102 71627139 -31867835 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1131 1861 201 49 24 chr15 71627572 71627646 -31867328 + MTD LTR MaLR 1 70 -349 1 1131 3285 57 2 2 chr15 71627646 71628054 -31866920 + L1_Mus1 LINE L1 6159 6566 -1 1 1131 1861 201 49 24 chr15 71628054 71628388 -31866586 + MTD LTR MaLR 71 419 0 1 1131 462 18 0 0 chr15 71628785 71628840 -31866134 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1131 218 312 12 12 chr15 71629591 71629672 -31865302 + GA-rich Low_complexity Low_complexity 3 83 0 1 1131 21 0 0 0 chr15 71630941 71630962 -31864012 + AT_rich Low_complexity Low_complexity 1 21 0 1 1131 434 75 15 0 chr15 71631212 71631279 -31863695 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 1131 228 196 18 0 chr15 71631721 71631777 -31863197 - L1MA5 LINE L1 -2 6298 6242 1 1131 412 297 161 5 chr15 71631789 71631975 -31862999 - B3 SINE B2 0 216 2 1 1131 266 297 53 33 chr15 71631975 71632125 -31862849 - L1MA5 LINE L1 -44 6256 6104 1 1131 227 290 0 45 chr15 71632642 71632754 -31862220 + (CATATA)n Simple_repeat Simple_repeat 1 107 0 1 1131 351 0 0 0 chr15 71633425 71633464 -31861510 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1131 797 236 48 15 chr15 71633491 71633697 -31861277 - B3 SINE B2 -3 213 1 1 1131 594 0 0 0 chr15 71634888 71634954 -31860020 + (CAG)n Simple_repeat Simple_repeat 1 66 0 1 1131 225 213 0 41 chr15 71635801 71635850 -31859124 + L1M2c LINE L1 173 219 -6570 1 1131 519 60 0 0 chr15 71636751 71636818 -31858156 + (TCC)n Simple_repeat Simple_repeat 1 67 0 1 1131 586 297 169 8 chr15 71639090 71639338 -31855636 + B4A SINE B4 5 292 0 1 1131 206 62 31 0 chr15 71639374 71639406 -31855568 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1131 181 389 63 0 chr15 71643732 71643858 -31851116 + MIR SINE MIR 103 236 -26 1 1131 425 169 10 10 chr15 71644107 71644203 -31850771 + Lx2B LINE L1 6896 6991 -9 1 1131 199 325 54 31 chr15 71646569 71646699 -31848275 + MIRb SINE MIR 104 236 -32 1 1131 345 314 22 36 chr15 71647068 71647207 -31847767 + ID_B1 SINE B4 78 214 -10 1 1131 435 83 0 0 chr15 71647466 71647526 -31847448 + (TAA)n Simple_repeat Simple_repeat 1 60 0 1 1131 217 306 0 0 chr15 71647735 71647797 -31847177 - MIR SINE MIR -111 151 90 1 1131 1391 11 26 5 chr15 71648378 71648759 -31846215 + (TCTA)n Simple_repeat Simple_repeat 1 389 0 1 1131 303 322 11 0 chr15 71648937 71649027 -31845947 + MIR SINE MIR 39 129 -133 2 1131 281 288 47 23 chr15 71649782 71649910 -31845064 + MLT1C LTR MaLR 28 158 -309 2 1131 450 0 0 0 chr15 71649945 71649995 -31844979 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1131 1584 208 134 3 chr15 71650941 71651307 -31843667 - MTD LTR MaLR 0 419 6 2 1131 186 167 0 0 chr15 71651818 71651854 -31843120 + (ATG)n Simple_repeat Simple_repeat 3 38 0 2 1131 328 348 36 6 chr15 71651866 71652031 -31842943 + (ATGGTG)n Simple_repeat Simple_repeat 4 173 0 2 1131 2920 30 3 0 chr15 71653141 71653477 -31841497 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1131 7578 211 72 28 chr15 71655685 71657382 -31837592 + Lx7 LINE L1 5925 7696 0 2 1131 652 254 87 14 chr15 71657600 71657808 -31837166 + ID_B1 SINE B4 1 223 -1 2 1131 180 0 0 0 chr15 71657833 71657853 -31837121 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 1131 198 0 0 0 chr15 71658185 71658207 -31836767 + (GAAAA)n Simple_repeat Simple_repeat 4 25 0 2 1131 384 292 54 7 chr15 71660846 71660994 -31833980 - MIRb SINE MIR -54 214 60 2 1131 27 92 0 0 chr15 71661030 71661106 -31833868 + AT_rich Low_complexity Low_complexity 1 76 0 2 1131 610 232 27 27 chr15 71661108 71661319 -31833655 + B3A SINE B2 3 216 0 2 1131 428 312 65 0 chr15 71661356 71661510 -31833464 + RSINE1 SINE B4 2 165 0 2 1131 194 116 0 23 chr15 71661522 71661566 -31833408 + (TAAAAA)n Simple_repeat Simple_repeat 4 46 0 2 1131 1372 238 112 33 chr15 71663520 71663914 -31831060 + Lx9 LINE L1 6955 7516 -128 2 1131 561 68 0 0 chr15 71663914 71663988 -31830986 + (TG)n Simple_repeat Simple_repeat 1 74 0 2 1131 1372 231 117 33 chr15 71663988 71664091 -31830883 + Lx9 LINE L1 7517 7620 -24 2 1131 279 0 0 0 chr15 71665138 71665169 -31829805 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1131 456 276 90 0 chr15 71665186 71665320 -31829654 - B3 SINE B2 -68 148 3 2 1131 285 308 0 0 chr15 71666584 71666662 -31828312 + (CATATA)n Simple_repeat Simple_repeat 1 78 0 2 1131 192 273 0 0 chr15 71666890 71666934 -31828040 - L2a LINE L2 -410 3016 2973 2 1131 259 284 147 0 chr15 71667599 71667694 -31827280 - PB1D10 SINE Alu -8 109 1 2 1131 1868 37 37 4 chr15 71668785 71669027 -31825947 + L1Md_F3 LINE L1 6335 6584 0 2 1131 284 330 0 9 chr15 71669439 71669549 -31825425 + MER58A DNA MER1_type 34 142 -82 2 1131 1022 237 65 59 chr15 71672469 71672810 -31822164 - Lx6 LINE L1 -1 7459 7117 2 1131 792 277 58 19 chr15 71672893 71673099 -31821875 - Lx5 LINE L1 -299 6751 6538 2 1131 221 343 87 23 chr15 71673274 71673447 -31821527 + MIR SINE MIR 28 211 -51 2 1131 1140 251 117 27 chr15 71674740 71675116 -31819858 + MTD LTR MaLR 1 410 -9 2 1131 1137 95 0 0 chr15 71676023 71676170 -31818804 - B1_Mus2 SINE Alu 0 147 1 2 1131 428 309 72 24 chr15 71677098 71677264 -31817710 - MER2 DNA MER2_type -24 321 148 2 1131 285 29 0 0 chr15 71677398 71677432 -31817542 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1131 612 351 21 5 chr15 71677450 71677642 -31817332 - B4 SINE B4 -4 288 94 2 1131 450 217 22 0 chr15 71679510 71679602 -31815372 - Lx9 LINE L1 -332 7312 7219 2 1131 364 315 70 8 chr15 71679616 71679744 -31815230 - ID_B1 SINE B4 -8 216 81 2 1131 212 172 0 49 chr15 71679787 71679848 -31815126 + T-rich Low_complexity Low_complexity 3 60 0 2 1131 285 29 0 0 chr15 71679855 71679889 -31815085 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1131 404 255 55 34 chr15 71679900 71680046 -31814928 - B1_Mur2 SINE Alu 0 149 1 2 1131 592 265 0 0 chr15 71680064 71680200 -31814774 - B1F SINE Alu -5 144 9 2 1131 193 326 44 11 chr15 71680313 71680403 -31814571 + MIR SINE MIR 56 148 -60 2 1131 258 383 9 0 chr15 71681127 71681242 -31813732 + ID_B1 SINE B4 93 208 -16 2 1131 285 98 0 0 chr15 71681659 71681700 -31813274 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 2 1131 241 270 86 43 chr15 71681733 71681849 -31813125 - MTEa LTR MaLR -8 371 251 2 1131 246 83 0 0 chr15 71681948 71681984 -31812990 + ORR1D2 LTR MaLR 335 370 0 2 1131 293 356 18 24 chr15 71682020 71682187 -31812787 + MER67C LTR ERV1 200 365 -346 2 1131 24 53 0 0 chr15 71682486 71682524 -31812450 + AT_rich Low_complexity Low_complexity 1 38 0 2 1131 375 91 18 0 chr15 71684108 71684163 -31810811 + RMER17C LTR ERVK 1 56 -354 2 1131 1700 161 5 90 chr15 71684142 71684617 -31810357 + RMER17C LTR ERVK 16 439 -519 2 1131 181 268 35 18 chr15 71685440 71685497 -31809477 + L2 LINE L2 8 65 -3354 2 1131 752 290 11 0 chr15 71685800 71685986 -31808988 + B3 SINE B2 29 216 0 2 1131 540 276 0 8 chr15 71686110 71686238 -31808736 - RSINE1 SINE B4 -36 129 3 2 1131 208 182 0 35 chr15 71686429 71686486 -31808488 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 2 1131 568 227 0 8 chr15 71687005 71687125 -31807849 + RSINE1 SINE B4 11 129 -36 2 1131 294 20 39 39 chr15 71688833 71688885 -31806089 + (TTCC)n Simple_repeat Simple_repeat 1 52 0 2 1131 240 122 0 0 chr15 71688891 71688932 -31806042 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1131 333 140 0 0 chr15 71689644 71689701 -31805273 + (T)n Simple_repeat Simple_repeat 1 57 0 2 1131 1189 290 88 24 chr15 71689728 71690261 -31804713 + MER67C LTR ERV1 141 707 -4 2 1131 351 276 90 49 chr15 71690460 71690582 -31804392 - B1F1 SINE Alu -11 138 12 2 1131 221 236 9 35 chr15 71693139 71693253 -31801721 + (TGGA)n Simple_repeat Simple_repeat 4 114 0 2 1131 225 102 51 0 chr15 71694786 71694845 -31800129 + (TTTG)n Simple_repeat Simple_repeat 1 62 0 2 1131 209 343 73 9 chr15 71695432 71695541 -31799433 + MIR SINE MIR 108 223 -39 2 1131 365 306 42 60 chr15 71695555 71695685 -31799289 + MER3 DNA MER1_type 38 172 -37 2 1131 841 222 95 0 chr15 71695685 71695874 -31799100 + B3 SINE B2 4 210 -6 2 1131 365 306 42 60 chr15 71695874 71695910 -31799064 + MER3 DNA MER1_type 173 201 -8 2 1132 694 338 58 62 chr15 71700707 71701032 -31793942 + MTE2a LTR MaLR 42 365 -14 2 1132 183 194 38 100 chr15 71701544 71701624 -31793350 + MIR SINE MIR 61 135 -73 2 1132 663 239 22 0 chr15 71702389 71702523 -31792451 - ID_B1 SINE B4 -16 208 72 2 1132 421 111 37 0 chr15 71703230 71703311 -31791663 + (TTTTC)n Simple_repeat Simple_repeat 2 85 0 2 1132 207 0 0 0 chr15 71703698 71703721 -31791253 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1132 636 94 0 0 chr15 71703721 71703827 -31791147 + (GA)n Simple_repeat Simple_repeat 1 106 0 2 1132 250 346 52 22 chr15 71703843 71703979 -31790995 - MIRb SINE MIR -94 174 35 2 1132 229 363 57 13 chr15 71704211 71704370 -31790604 + MIRb SINE MIR 32 197 -71 2 1132 1506 284 90 24 chr15 71704445 71705023 -31789951 + Lx8 LINE L1 6852 7467 -6 2 1132 383 315 77 39 chr15 71705137 71705480 -31789494 + MTEb LTR MaLR 41 379 0 2 1132 499 279 105 108 chr15 71705623 71706585 -31788389 + L1MC5 LINE L1 6820 7778 -183 2 1132 2186 173 0 20 chr15 71706664 71707071 -31787903 - MTD LTR MaLR -20 399 1 2 1132 386 343 92 29 chr15 71708233 71708473 -31786501 + LTR16C LTR ERVL 172 426 -63 2 1132 405 0 0 0 chr15 71709174 71709219 -31785755 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1132 441 0 0 0 chr15 71709219 71709267 -31785707 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 1132 234 0 0 0 chr15 71709267 71709292 -31785682 + (GA)n Simple_repeat Simple_repeat 2 27 0 2 1132 1516 288 18 44 chr15 71709680 71710225 -31784749 + Lx9 LINE L1 6696 7226 -418 2 1132 264 294 12 0 chr15 71710279 71710364 -31784610 + Lx9 LINE L1 7380 7465 -179 2 1132 315 0 0 0 chr15 71710378 71710413 -31784561 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1132 21 0 0 0 chr15 71710523 71710544 -31784430 + AT_rich Low_complexity Low_complexity 1 21 0 2 1132 5570 53 7 25 chr15 71713468 71714186 -31780788 + L1_Mus1 LINE L1 5863 6567 0 2 1132 624 27 0 0 chr15 71714195 71714269 -31780705 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 2 1132 834 287 64 8 chr15 71714277 71714544 -31780430 - Lx8 LINE L1 -361 7112 6831 2 1132 373 268 26 18 chr15 71714542 71714656 -31780318 + Lx8 LINE L1 7253 7367 -106 2 1132 722 266 41 21 chr15 71715510 71715752 -31779222 + ORR1E LTR MaLR 1 247 -112 2 1132 469 279 23 17 chr15 71715820 71715995 -31778979 + ORR1E LTR MaLR 184 359 0 2 1132 267 31 0 0 chr15 71716123 71716155 -31778819 + (TCTG)n Simple_repeat Simple_repeat 3 34 0 2 1132 198 0 0 0 chr15 71717601 71717623 -31777351 + (TTG)n Simple_repeat Simple_repeat 2 23 0 2 1132 364 272 13 111 chr15 71718597 71718750 -31776224 - B1F SINE Alu -3 146 9 2 1132 216 86 0 0 chr15 71719852 71719887 -31775087 + (A)n Simple_repeat Simple_repeat 1 35 0 2 1132 450 0 0 0 chr15 71720414 71720464 -31774510 + (TC)n Simple_repeat Simple_repeat 2 51 0 2 1132 432 0 0 0 chr15 71720464 71720511 -31774463 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1132 297 301 43 11 chr15 71720624 71720718 -31774256 + Tigger7 DNA MER2_type 16 112 -2379 2 1132 528 276 0 0 chr15 71721420 71721543 -31773431 + B1F SINE Alu 12 134 -15 2 1132 219 323 88 44 chr15 71722294 71722430 -31772544 + MIRc SINE MIR 11 152 -116 2 1132 234 294 107 10 chr15 71723063 71723166 -31771808 - LTR16C LTR ERVL -150 339 227 2 1132 763 242 14 47 chr15 71723169 71723381 -31771593 + B3 SINE B2 2 206 -10 2 1132 350 172 0 0 chr15 71723785 71723843 -31771131 + RMER6A LTR ERVK 1 58 -403 2 1132 711 184 0 0 chr15 71723843 71723984 -31770990 + GA-rich Low_complexity Low_complexity 1 141 0 2 1132 3845 125 23 15 chr15 71723984 71724638 -31770336 + RMER6A LTR ERVK 52 756 0 2 1132 320 304 11 0 chr15 71726679 71726771 -31768203 + L1MEf LINE L1 1999 2091 -4109 2 1132 316 257 0 39 chr15 71728407 71728484 -31766490 + B1_Mur1 SINE Alu 76 149 0 3 1132 828 262 104 49 chr15 71728560 71728945 -31766029 + BGLII_B LTR ERVK 9 414 -27 3 1132 372 22 0 0 chr15 71729735 71729780 -31765194 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1132 368 255 49 39 chr15 71729793 71729895 -31765079 - Lx8 LINE L1 -122 7351 7249 3 1132 508 274 76 23 chr15 71729944 71730075 -31764899 - ID_B1 SINE B4 -8 216 79 3 1132 1220 276 66 92 chr15 71730736 71731422 -31763552 - L1M3 LINE L1 -1323 4817 4150 3 1132 213 238 10 19 chr15 71731946 71732049 -31762925 + (TATATG)n Simple_repeat Simple_repeat 3 104 0 3 1132 21 0 0 0 chr15 71732478 71732499 -31762475 + AT_rich Low_complexity Low_complexity 1 21 0 3 1132 317 270 157 21 chr15 71732680 71732820 -31762154 + RMER5 LTR ERV1 113 271 -263 3 1132 252 0 0 0 chr15 71733129 71733157 -31761817 + (TGG)n Simple_repeat Simple_repeat 2 29 0 3 1132 396 0 0 0 chr15 71733157 71733201 -31761773 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1132 22 0 0 0 chr15 71733937 71733959 -31761015 + AT_rich Low_complexity Low_complexity 1 22 0 3 1132 207 0 0 0 chr15 71734212 71734235 -31760739 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 3 1132 441 0 0 0 chr15 71734769 71734818 -31760156 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1132 26 0 0 0 chr15 71735158 71735184 -31759790 + AT_rich Low_complexity Low_complexity 1 26 0 3 1132 221 0 35 0 chr15 71735339 71735368 -31759606 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 3 1132 1008 287 73 44 chr15 71735842 71736225 -31758749 + RMER5 LTR ERV1 141 534 0 3 1132 300 172 24 57 chr15 71736783 71736906 -31758068 + CT-rich Low_complexity Low_complexity 6 124 0 3 1132 777 308 60 55 chr15 71738693 71739092 -31755882 + MLT1A1 LTR MaLR 1 401 -7 3 1132 3316 97 22 34 chr15 71739316 71739819 -31755155 + Lx LINE L1 6158 6654 0 3 1132 235 253 0 75 chr15 71739819 71739913 -31755061 + A-rich Low_complexity Low_complexity 2 88 0 3 1132 232 263 0 17 chr15 71740030 71740088 -31754886 + GA-rich Low_complexity Low_complexity 1 57 0 3 1132 701 241 17 80 chr15 71741933 71742172 -31752802 + L1MA4 LINE L1 5707 5930 -370 3 1132 776 186 91 46 chr15 71742576 71742773 -31752201 + B3 SINE B2 2 207 -9 3 1132 182 211 93 37 chr15 71743735 71743789 -31751185 - MIR SINE MIR -70 138 82 3 1132 600 292 7 0 chr15 71743980 71744117 -31750857 - B1F1 SINE Alu 0 149 12 3 1132 243 292 20 92 chr15 71744044 71744142 -31750832 - MT2B2 LTR ERVL -345 239 149 3 1132 401 298 35 9 chr15 71744439 71744554 -31750420 - PB1D7 SINE Alu 0 120 3 3 1132 1353 212 129 13 chr15 71746445 71746817 -31748157 + MTD LTR MaLR 1 415 -4 3 1132 405 0 0 0 chr15 71746892 71746937 -31748037 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1132 207 0 0 0 chr15 71748956 71748979 -31745995 + (TGG)n Simple_repeat Simple_repeat 1 23 0 3 1132 183 226 17 86 chr15 71749055 71749113 -31745861 - MIR SINE MIR -131 131 78 3 1132 249 245 0 0 chr15 71750385 71750434 -31744540 + ID4 SINE ID 1 49 -34 3 1132 330 26 0 0 chr15 71750579 71750618 -31744356 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 1132 2753 109 113 25 chr15 71751367 71751837 -31743137 + MURVY-LTR LTR ERV1 2 512 -7 3 1132 1578 58 0 0 chr15 71751837 71752027 -31742947 - B2_Mm1a SINE B2 -2 191 2 3 1132 767 216 0 0 chr15 71752619 71752753 -31742221 + B3A SINE B2 12 145 -53 3 1132 270 0 0 0 chr15 71752757 71752787 -31742187 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 1132 22 35 0 0 chr15 71752787 71752816 -31742158 + AT_rich Low_complexity Low_complexity 1 29 0 3 1132 399 106 0 0 chr15 71753007 71753073 -31741901 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 1132 313 213 40 0 chr15 71753694 71753769 -31741205 - Lx7 LINE L1 -3 7693 7616 3 1132 185 133 0 77 chr15 71754242 71754307 -31740667 + CT-rich Low_complexity Low_complexity 1 60 0 3 1132 476 369 42 44 chr15 71754682 71755114 -31739860 + L2a LINE L2 2938 3422 -4 3 1132 770 242 242 13 chr15 71755910 71756211 -31738763 + ORR1D2 LTR MaLR 1 370 0 3 1132 2747 39 15 0 chr15 71756355 71756686 -31738288 - L1Md_F2 LINE L1 0 6582 6247 3 1132 187 326 154 55 chr15 71758218 71758400 -31736574 + MIRb SINE MIR 5 204 -64 3 1132 311 323 62 73 chr15 71758472 71758649 -31736325 + B4A SINE B4 118 292 0 3 1132 551 256 63 53 chr15 71760567 71760852 -31734122 + L1MC5 LINE L1 7616 7903 -58 3 1132 270 264 0 0 chr15 71764325 71764378 -31730596 + B3A SINE B2 1 53 -145 3 1132 237 170 149 0 chr15 71765078 71765125 -31729849 + ORR1B1-int LTR MaLR 255 308 -1201 3 1132 1288 69 4 0 chr15 71765083 71765274 -31729700 - ORR1A1-int LTR MaLR -1364 599 405 3 1132 2280 228 42 14 chr15 71765602 71766147 -31728827 + Lx7 LINE L1 6759 7319 -377 3 1132 201 39 0 0 chr15 71766147 71766173 -31728801 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 1132 207 136 22 22 chr15 71766188 71766233 -31728741 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 3 1132 243 103 0 0 chr15 71766268 71766307 -31728667 + (TTTG)n Simple_repeat Simple_repeat 3 41 0 3 1132 207 0 0 0 chr15 71768701 71768724 -31726250 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 3 1132 472 321 73 78 chr15 71769309 71769515 -31725459 - B4A SINE B4 -6 286 82 3 1132 3684 91 11 15 chr15 71769704 71770230 -31724744 + L1_Mus3 LINE L1 6109 6632 -6 3 1132 327 288 0 0 chr15 71770347 71770458 -31724516 + (CA)n Simple_repeat Simple_repeat 2 112 0 3 1132 1422 232 113 11 chr15 71770668 71771039 -31723935 - MTD LTR MaLR -10 409 1 3 1132 210 233 111 12 chr15 71771354 71771436 -31723538 - MIR SINE MIR -84 192 91 3 1132 21 57 0 0 chr15 71771475 71771510 -31723464 + AT_rich Low_complexity Low_complexity 1 35 0 3 1132 245 248 144 42 chr15 71776672 71776790 -31718184 - MIRc SINE MIR -128 140 11 3 1132 906 36 0 0 chr15 71777701 71777811 -31717163 + (GGGA)n Simple_repeat Simple_repeat 1 110 0 3 1132 337 291 0 26 chr15 71777887 71778000 -31716974 + GA-rich Low_complexity Low_complexity 2 111 0 3 1132 185 308 128 34 chr15 71778284 71778432 -31716542 + MIR SINE MIR 96 257 -5 3 1132 398 342 76 5 chr15 71778658 71778843 -31716131 - RMER30 DNA MER1_type -3 199 2 3 1132 445 259 23 0 chr15 71779876 71780007 -31714967 + L1_Mur3 LINE L1 4151 4284 -1596 3 1132 812 255 29 0 chr15 71780045 71780253 -31714721 + B3 SINE B2 3 216 0 3 1132 234 0 0 0 chr15 71780508 71780534 -31714440 + (GGAA)n Simple_repeat Simple_repeat 4 29 0 3 1132 230 296 9 75 chr15 71780893 71780920 -31714054 - RMER12 LTR ERVK -506 816 790 3 1132 396 0 0 0 chr15 71780920 71780964 -31714010 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1132 230 296 9 75 chr15 71780964 71781042 -31713932 - RMER12 LTR ERVK -533 789 718 3 1132 321 118 23 34 chr15 71782233 71782321 -31712653 + (CAGAGA)n Simple_repeat Simple_repeat 6 92 0 3 1132 242 161 43 0 chr15 71782307 71782400 -31712574 + (CA)n Simple_repeat Simple_repeat 1 97 0 3 1132 25 51 0 0 chr15 71785472 71785511 -31709463 + AT_rich Low_complexity Low_complexity 1 39 0 3 1132 337 39 19 19 chr15 71785609 71785661 -31709313 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1132 1911 208 53 28 chr15 71785661 71786096 -31708878 - Lx9 LINE L1 -192 7452 7007 3 1132 187 54 26 26 chr15 71786222 71786260 -31708714 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 3 1132 181 286 36 0 chr15 71786481 71786537 -31708437 + MIRm SINE MIR 107 164 -112 3 1132 280 303 53 0 chr15 71786587 71786663 -31708311 + ID4 SINE ID 1 80 -3 3 1132 948 169 0 0 chr15 71786670 71786924 -31708050 + (TCTA)n Simple_repeat Simple_repeat 1 254 0 3 1132 273 227 109 43 chr15 71786975 71787067 -31707907 + PB1D9 SINE Alu 35 149 0 3 1132 353 308 81 7 chr15 71787335 71787583 -31707391 + MLT1A0 LTR MaLR 33 332 -33 3 1132 506 323 0 0 chr15 71787583 71787710 -31707264 + Lx8 LINE L1 7203 7329 -144 3 1132 888 104 0 0 chr15 71787710 71787844 -31707130 + (GGAA)n Simple_repeat Simple_repeat 1 134 0 3 1132 272 176 0 0 chr15 71787876 71787927 -31707047 + Lx8 LINE L1 7416 7466 -7 3 1132 421 289 90 43 chr15 71789253 71789441 -31705533 - MIRb SINE MIR -52 216 20 3 1132 1176 61 0 0 chr15 71789604 71789751 -31705223 - B1_Mm SINE Alu 0 147 1 3 1132 771 93 42 12 chr15 71789923 71790051 -31704923 - B1_Mus1 SINE Alu 0 120 1 3 1132 484 197 60 120 chr15 71790051 71790108 -31704866 - MT2B LTR ERVL -447 154 107 3 1132 591 327 22 31 chr15 71790480 71790704 -31704270 - MLT1A0 LTR MaLR -31 334 113 3 1132 555 43 0 0 chr15 71791180 71791250 -31703724 + (TG)n Simple_repeat Simple_repeat 2 71 0 3 1132 221 333 0 0 chr15 71791256 71791319 -31703655 - PB1D10 SINE Alu -19 98 36 3 1132 2075 189 112 18 chr15 71791922 71792422 -31702552 - RLTR40 LTR ERVK -5 812 266 3 1132 739 272 34 0 chr15 71793370 71793576 -31701398 - L1MB8 LINE L1 -6 6172 5960 3 1132 444 298 112 2 chr15 71793673 71793935 -31701039 - L1MB8 LINE L1 -385 5799 5508 3 1132 439 290 77 89 chr15 71793940 71794230 -31700744 - L1MB8 LINE L1 -3567 2579 2273 3 1132 1539 74 64 0 chr15 71794230 71794433 -31700541 - L1_Mus1 LINE L1 0 6567 6352 3 1132 439 290 77 89 chr15 71794433 71794444 -31700530 - L1M4 LINE L1 -3874 2272 2272 3 1132 321 68 0 0 chr15 71794444 71794488 -31700486 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1132 439 290 77 89 chr15 71794488 71794507 -31700467 - L1MB8 LINE L1 -3874 2272 2268 3 1132 386 225 0 0 chr15 71794507 71794578 -31700396 - ID4_ SINE ID -12 71 1 3 1132 439 290 77 89 chr15 71794578 71794725 -31700249 - L1MB8 LINE L1 -3879 2267 2116 3 1132 378 0 0 0 chr15 71796522 71796564 -31698410 + (TC)n Simple_repeat Simple_repeat 1 42 0 3 1132 396 128 0 0 chr15 71796564 71796641 -31698333 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 1132 243 0 0 0 chr15 71796716 71796743 -31698231 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1132 1151 71 7 0 chr15 71798229 71798370 -31696604 - B1_Mus1 SINE Alu -5 143 2 4 1132 243 0 0 0 chr15 71798377 71798404 -31696570 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1132 411 21 0 0 chr15 71798877 71798925 -31696049 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1132 184 316 62 56 chr15 71799747 71799891 -31695083 + MIRb SINE MIR 56 200 -68 4 1132 233 267 9 79 chr15 71799930 71800044 -31694930 + CT-rich Low_complexity Low_complexity 2 107 0 4 1132 216 97 0 0 chr15 71801214 71801245 -31693729 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1132 229 293 24 24 chr15 71803670 71803754 -31691220 - MER2 DNA MER2_type -28 317 234 4 1132 219 167 0 0 chr15 71803841 71803883 -31691091 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 4 1132 266 306 18 36 chr15 71804639 71804751 -31690223 + RMER30 DNA MER1_type 8 117 -85 4 1132 180 0 0 0 chr15 71805118 71805138 -31689836 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1132 404 269 58 26 chr15 71805194 71805328 -31689646 + MIR SINE MIR 81 223 -45 4 1132 412 307 47 8 chr15 71806245 71806373 -31688601 + MIR SINE MIR 20 152 -110 4 1132 439 138 64 16 chr15 71806491 71806616 -31688358 + (CTATT)n Simple_repeat Simple_repeat 5 135 0 4 1132 302 331 16 55 chr15 71807211 71807339 -31687635 - MIRb SINE MIR -23 245 123 4 1132 290 342 59 42 chr15 71810202 71810405 -31684569 + MIRc SINE MIR 17 217 -51 4 1132 233 208 0 77 chr15 71815531 71815583 -31679391 + ID_B1 SINE B4 174 221 -3 4 1132 270 0 0 0 chr15 71815726 71815756 -31679218 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 4 1132 243 0 0 0 chr15 71816133 71816160 -31678814 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 4 1132 1156 50 0 0 chr15 71816162 71816302 -31678672 - B1_Mus1 SINE Alu -6 142 3 4 1132 330 26 0 0 chr15 71817162 71817201 -31677773 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 4 1132 342 0 0 0 chr15 71819660 71819698 -31675276 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1132 774 60 0 0 chr15 71819702 71819802 -31675172 + (TAGA)n Simple_repeat Simple_repeat 1 100 0 4 1132 2986 289 59 22 chr15 71819850 71820893 -31674081 + Lx8 LINE L1 6246 7327 -146 4 1132 240 100 36 36 chr15 71820898 71820981 -31673993 + T-rich Low_complexity Low_complexity 2 84 0 4 1132 22 0 0 0 chr15 71821362 71821384 -31673590 + AT_rich Low_complexity Low_complexity 1 22 0 4 1132 346 339 75 51 chr15 71822573 71822875 -31672099 + MTEb LTR MaLR 62 374 -5 4 1132 326 259 101 55 chr15 71824963 71825109 -31669865 - MIR SINE MIR -39 229 68 4 1132 275 286 24 12 chr15 71825307 71825392 -31669582 - MIRb SINE MIR -129 139 51 4 1132 2363 127 82 13 chr15 71825711 71826103 -31668871 + MTC LTR MaLR 3 421 0 4 1132 229 286 32 0 chr15 71826432 71826495 -31668479 - MLT1B LTR MaLR -80 310 246 4 1133 1076 253 12 121 chr15 71828070 71828492 -31666482 + MTE2a LTR MaLR 4 379 0 4 1133 313 247 31 51 chr15 71830610 71830708 -31664266 - HAL1-2a_MD LINE L1 -488 2536 2441 4 1133 1301 173 23 0 chr15 71830913 71831133 -31663841 + URR1B DNA MER1_type 1 225 0 4 1133 393 323 8 52 chr15 71831318 71831452 -31663522 + RSINE1 SINE B4 3 130 -35 4 1133 234 0 0 0 chr15 71832163 71832189 -31662785 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 1133 181 231 26 0 chr15 71834020 71834059 -31660915 + L4 LINE RTE 974 1013 -1016 4 1133 1137 220 0 5 chr15 71835686 71835905 -31659069 + URR1B DNA MER1_type 8 225 0 4 1133 234 0 0 0 chr15 71837886 71837912 -31657062 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 1133 351 0 0 0 chr15 71837912 71837950 -31657024 + (GA)n Simple_repeat Simple_repeat 1 39 0 4 1133 502 313 87 43 chr15 71837976 71838183 -31656791 - B4A SINE B4 -12 280 65 4 1133 878 165 228 6 chr15 71839323 71839494 -31655480 + B3 SINE B2 2 210 -6 4 1133 1104 133 0 0 chr15 71840020 71840200 -31654774 + (GGA)n Simple_repeat Simple_repeat 1 180 0 4 1133 2350 142 48 15 chr15 71840768 71841162 -31653812 + MTB_Mm LTR MaLR 1 407 0 4 1133 230 193 0 17 chr15 71842031 71842089 -31652885 + GA-rich Low_complexity Low_complexity 1 57 0 4 1133 326 322 106 64 chr15 71842614 71842972 -31652002 - L1M5 LINE L1 -413 5711 5339 4 1133 1106 245 92 123 chr15 71843168 71843647 -31651327 + RMER4B LTR ERVK 2 572 -13 4 1133 477 331 8 0 chr15 71843660 71843784 -31651190 - B4A SINE B4 -165 127 3 4 1133 197 335 63 109 chr15 71844022 71844196 -31650778 - L2c LINE L2 -178 3209 3044 4 1133 999 291 111 20 chr15 71845285 71845409 -31649565 + L1M3 LINE L1 3771 3904 -2236 4 1133 393 22 0 0 chr15 71845409 71845455 -31649519 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1133 999 291 111 20 chr15 71845455 71845981 -31648993 + L1M3 LINE L1 3905 4479 -1661 4 1133 1762 256 46 20 chr15 71846247 71846745 -31648229 + Lx8 LINE L1 6959 7469 -4 4 1133 442 230 23 47 chr15 71846768 71846896 -31648078 - Lx7 LINE L1 -542 7154 7030 4 1133 471 78 0 0 chr15 71847033 71847097 -31647877 + (GGA)n Simple_repeat Simple_repeat 2 65 0 4 1133 310 295 121 7 chr15 71847097 71847237 -31647737 + HAL1-3A_ME LINE L1 2284 2439 -419 4 1133 238 109 0 52 chr15 71847239 71847297 -31647677 + GA-rich Low_complexity Low_complexity 3 57 0 4 1133 231 339 87 97 chr15 71847473 71847669 -31647305 + MLT1D LTR MaLR 13 206 -299 4 1133 194 370 67 18 chr15 71848498 71848663 -31646311 - MIRb SINE MIR -82 186 14 4 1133 820 230 77 12 chr15 71848807 71849053 -31645921 - L1MC LINE L1 -2285 3861 3600 4 1133 199 328 0 0 chr15 71850252 71850313 -31644661 + MIRc SINE MIR 94 154 -114 4 1133 193 98 49 0 chr15 71851486 71851527 -31643447 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1133 344 281 110 12 chr15 71851675 71851848 -31643126 + L1MDb LINE L1 973 1162 -5247 4 1133 269 301 76 19 chr15 71851858 71851963 -31643011 + PB1D7 SINE Alu 10 120 0 4 1133 236 329 12 48 chr15 71852126 71852209 -31642765 - RMER13A LTR ERVK -211 697 618 4 1133 334 254 0 0 chr15 71852379 71852489 -31642485 + C-rich Low_complexity Low_complexity 1 110 0 4 1133 871 269 70 37 chr15 71852491 71852761 -31642213 - RMER13A LTR ERVK -469 391 113 4 1133 493 283 187 9 chr15 71853330 71853572 -31641402 - MLT1A0 LTR MaLR 0 365 90 4 1133 431 254 63 56 chr15 71853819 71853961 -31641013 - MLT1A0 LTR MaLR -217 148 6 4 1133 860 198 11 1 chr15 71854325 71854493 -31640481 + Lx5 LINE L1 6745 6941 -117 4 1133 1327 249 82 17 chr15 71854523 71854879 -31640095 + MTEb LTR MaLR 1 379 0 4 1133 198 50 49 24 chr15 71855647 71855688 -31639286 + (CCCCCA)n Simple_repeat Simple_repeat 5 46 0 4 1133 1170 48 7 14 chr15 71855771 71855919 -31639055 + B1_Mus1 SINE Alu 2 148 0 4 1133 228 135 0 0 chr15 71858165 71858202 -31636772 + (CATA)n Simple_repeat Simple_repeat 3 39 0 4 1133 3053 108 7 2 chr15 71859766 71860203 -31634771 + L1_Mus4 LINE L1 6197 6635 -1 4 1133 253 304 7 98 chr15 71860606 71860759 -31634215 - L1MB1 LINE L1 -7 6161 6023 4 1133 747 120 0 0 chr15 71861678 71861795 -31633179 + (TC)n Simple_repeat Simple_repeat 2 118 0 4 1133 258 371 59 22 chr15 71862355 71862490 -31632484 - L3 LINE CR1 -12 4477 4338 4 1133 188 289 132 0 chr15 71869270 71869346 -31625628 - MIRb SINE MIR -179 89 4 4 1133 212 179 0 0 chr15 71869524 71869563 -31625411 + T-rich Low_complexity Low_complexity 1 39 0 4 1133 335 305 70 105 chr15 71869583 71869755 -31625219 - B4 SINE B4 0 292 127 4 1133 4372 52 2 7 chr15 71869932 71870479 -31624495 - L1Md_F2 LINE L1 0 6582 6039 4 1133 400 264 95 52 chr15 71870479 71870588 -31624386 - B4A SINE B4 -176 116 1 4 1133 423 0 0 0 chr15 71871074 71871121 -31623853 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1133 810 279 133 7 chr15 71871567 71871852 -31623122 + MER2 DNA MER2_type 1 321 -24 4 1133 2968 58 45 3 chr15 71871923 71872303 -31622671 - MTA_Mm LTR MaLR 0 396 1 4 1133 896 328 60 102 chr15 71873792 71874155 -31620819 - MER45B DNA Tip100 -1 1039 699 4 1133 384 299 237 12 chr15 71874155 71874324 -31620650 - B3 SINE B2 -7 209 3 4 1133 896 328 60 102 chr15 71874324 71874511 -31620463 - MER45B DNA Tip100 -342 698 526 4 1133 749 204 213 11 chr15 71874511 71874699 -31620275 + URR1A DNA MER1_type 1 226 0 4 1133 896 328 60 102 chr15 71874699 71874803 -31620171 - MER45B DNA Tip100 -515 525 412 4 1133 21 36 0 0 chr15 71874846 71874874 -31620100 + AT_rich Low_complexity Low_complexity 1 28 0 4 1133 596 328 126 15 chr15 71875344 71875613 -31619361 - MER45B DNA Tip100 -740 300 2 4 1133 358 278 9 18 chr15 71875961 71876071 -31618903 + PB1D10 SINE Alu 1 109 -8 4 1133 423 0 0 0 chr15 71876159 71876206 -31618768 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1133 709 57 40 0 chr15 71876661 71876785 -31618189 + (GGAA)n Simple_repeat Simple_repeat 3 131 0 4 1133 2638 157 0 30 chr15 71876794 71877221 -31617753 + MTC LTR MaLR 3 416 -5 4 1133 315 260 91 0 chr15 71878480 71878557 -31616417 - RMER15 LTR ERVL 0 575 492 4 1133 1748 162 61 96 chr15 71878961 71879356 -31615618 - ORR1C2 LTR MaLR -3 381 1 4 1133 337 263 50 58 chr15 71879556 71879677 -31615297 + RMER15 LTR ERVL 39 158 -417 4 1133 729 247 147 5 chr15 71879670 71879861 -31615113 + RMER15 LTR ERVL 270 487 -88 4 1133 396 306 54 9 chr15 71879863 71879975 -31614999 - RMER15 LTR ERVL -189 386 270 4 1133 337 263 50 58 chr15 71879968 71880089 -31614885 - RMER15 LTR ERVL -417 158 39 4 1133 1748 162 61 96 chr15 71880289 71880684 -31614290 + ORR1C2 LTR MaLR 1 381 -3 4 1133 458 313 107 40 chr15 71881698 71881951 -31613023 + MLT2B4 LTR ERVL 4 273 -283 4 1133 345 24 0 0 chr15 71881966 71882008 -31612966 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1133 212 311 19 19 chr15 71882911 71883019 -31611955 + (TATATG)n Simple_repeat Simple_repeat 6 113 0 4 1133 647 287 120 21 chr15 71883019 71883261 -31611713 - MER2 DNA MER2_type -5 340 75 4 1133 181 339 105 45 chr15 71884462 71884595 -31610379 - L2b LINE L2 -16 3359 3219 4 1133 277 62 20 20 chr15 71884976 71885025 -31609949 + (GGGAGA)n Simple_repeat Simple_repeat 1 49 0 5 1133 801 288 111 53 chr15 71885025 71885589 -31609385 + L1MEg LINE L1 985 1683 -4734 5 1133 1387 261 67 19 chr15 71885597 71885968 -31609006 - MTD LTR MaLR -13 406 18 5 1133 329 270 0 0 chr15 71886007 71886099 -31608875 + L1MEg LINE L1 1682 1793 -4624 5 1133 347 317 72 51 chr15 71886249 71886485 -31608489 + L1MEg LINE L1 1925 2165 -4237 5 1133 826 232 80 5 chr15 71886531 71886730 -31608244 - B3 SINE B2 -1 215 2 5 1133 480 244 141 30 chr15 71886915 71887050 -31607924 - MTE2b LTR MaLR -23 356 199 5 1133 180 211 42 0 chr15 71887095 71887166 -31607808 + GA-rich Low_complexity Low_complexity 6 79 0 5 1133 323 235 100 20 chr15 71887609 71887709 -31607265 - MER20 DNA MER1_type -73 146 39 5 1133 317 329 62 70 chr15 71887744 71888002 -31606972 + L1MEg LINE L1 2821 3076 -3245 5 1133 252 247 106 0 chr15 71888016 71888101 -31606873 + L1MC LINE L1 2973 3066 -3080 5 1133 434 247 10 20 chr15 71888174 71888273 -31606701 + ID_B1 SINE B4 94 191 -33 5 1133 346 262 81 8 chr15 71888179 71888302 -31606672 + B1F1 SINE Alu 18 149 0 5 1133 185 365 41 10 chr15 71888490 71888587 -31606387 + MIRb SINE MIR 109 208 -60 5 1133 402 129 0 0 chr15 71888766 71888851 -31606123 + (TC)n Simple_repeat Simple_repeat 2 86 0 5 1133 501 155 181 0 chr15 71889340 71889456 -31605518 + Lx9 LINE L1 7303 7439 -205 5 1133 495 138 9 9 chr15 71889456 71889566 -31605408 + Lx9 LINE L1 7534 7643 -1 5 1133 1963 209 44 12 chr15 71891207 71891613 -31603361 - MTD LTR MaLR 0 419 1 5 1133 283 317 39 31 chr15 71892271 71892398 -31602576 - L1M3 LINE L1 -1378 4762 4635 5 1133 775 329 34 44 chr15 71892407 71892792 -31602182 - MER89 LTR ERV1 0 559 179 5 1133 462 296 95 35 chr15 71895026 71895372 -31599602 - L1M5 LINE L1 -1034 5112 4746 5 1133 22 0 0 0 chr15 71895692 71895714 -31599260 + AT_rich Low_complexity Low_complexity 1 22 0 5 1133 183 80 0 0 chr15 71896226 71896251 -31598723 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 1133 2501 80 0 0 chr15 71896356 71896667 -31598307 + RLTR10E LTR ERVK 1 311 0 5 1133 610 109 22 0 chr15 71896667 71896759 -31598215 + MMERVK10C-int LTR ERVK 1 94 -7487 5 1133 624 261 7 0 chr15 71896754 71896907 -31598067 + MMERVK10C-int LTR ERVK 271 424 -7157 5 1133 631 218 51 10 chr15 71896908 71897074 -31597900 + MMERVK10C-int LTR ERVK 664 836 -6745 5 1133 933 82 34 23 chr15 71897074 71897249 -31597725 + (GGAAA)n Simple_repeat Simple_repeat 3 179 0 5 1133 631 218 51 10 chr15 71897249 71897277 -31597697 + MMERVK10C-int LTR ERVK 837 865 -6716 5 1133 615 125 0 37 chr15 71897280 71897388 -31597586 + IAP-d-int LTR ERVK 74 177 -6365 5 1133 794 179 40 0 chr15 71897382 71897533 -31597441 + IAP-d-int LTR ERVK 347 503 -6039 5 1133 1685 86 103 0 chr15 71897533 71897766 -31597208 + IAP-d-int LTR ERVK 5007 5263 -1279 5 1133 1718 213 14 6 chr15 71897765 71898124 -31596850 + IAPEY3-int LTR ERVK 7046 7407 -273 5 1133 2500 84 0 0 chr15 71898213 71898524 -31596450 + RLTR10E LTR ERVK 1 311 0 5 1133 1125 236 70 49 chr15 71898909 71899265 -31595709 - ORR1D2 LTR MaLR -2 417 1 5 1133 334 279 48 0 chr15 71899356 71899460 -31595514 + ORR1E LTR MaLR 1 109 -250 5 1133 234 116 0 0 chr15 71899862 71899905 -31595069 + (T)n Simple_repeat Simple_repeat 1 43 0 5 1133 396 338 80 26 chr15 71899975 71900361 -31594613 - L1M5 LINE L1 -2740 3406 3000 5 1133 21 0 0 0 chr15 71900391 71900412 -31594562 + AT_rich Low_complexity Low_complexity 1 21 0 5 1133 2204 295 63 105 chr15 71900571 71901243 -31593731 - L1_Mur3 LINE L1 -1127 4753 4093 5 1133 1234 48 0 0 chr15 71901243 71901390 -31593584 + B1_Mus2 SINE Alu 1 147 0 5 1133 2204 296 65 103 chr15 71901390 71902586 -31592388 - L1_Mur3 LINE L1 -1788 4092 2968 5 1133 316 329 152 16 chr15 71902563 71902878 -31592096 - L1M5 LINE L1 -3355 2791 2434 5 1133 247 279 96 36 chr15 71903725 71903892 -31591082 + L1M5 LINE L1 5276 5452 -742 5 1133 192 159 22 22 chr15 71907031 71907076 -31587898 + L2b LINE L2 3330 3374 -1 5 1133 180 135 0 0 chr15 71907382 71907419 -31587555 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 5 1133 295 248 186 0 chr15 71908785 71909014 -31585960 - MER33 DNA MER1_type -6 318 45 5 1133 480 18 0 0 chr15 71909058 71909115 -31585859 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 1133 361 255 64 0 chr15 71909303 71909397 -31585577 - MER89 LTR ERV1 0 559 460 5 1133 485 240 24 67 chr15 71909605 71909770 -31585204 - HAL1-2a_MD LINE L1 -522 2502 2345 5 1133 212 318 19 9 chr15 71909782 71909890 -31585084 + (ATG)n Simple_repeat Simple_repeat 3 111 0 5 1133 222 241 0 18 chr15 71911266 71911321 -31583653 + GA-rich Low_complexity Low_complexity 2 55 0 5 1133 500 313 48 6 chr15 71911338 71911505 -31583469 + B3A SINE B2 1 174 -24 5 1133 645 196 21 14 chr15 71911531 71911676 -31583298 + Lx9 LINE L1 6563 6708 -936 5 1133 183 156 0 0 chr15 71911935 71911967 -31583007 + A-rich Low_complexity Low_complexity 1 32 0 5 1133 223 260 27 14 chr15 71912785 71912859 -31582115 + GA-rich Low_complexity Low_complexity 3 77 0 5 1133 189 0 0 0 chr15 71913063 71913084 -31581890 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 5 1133 1904 155 42 25 chr15 71913478 71913881 -31581093 + RMER17C LTR ERVK 1 410 0 5 1133 917 301 90 20 chr15 71916624 71916970 -31578004 + MTEa LTR MaLR 1 370 -9 5 1133 38763 31 1 0 chr15 71918718 71925776 -31569198 - L1Md_T LINE L1 0 6585 1 5 1133 413 197 199 25 chr15 71925773 71925934 -31569040 - L1MA8 LINE L1 -21 6270 6082 5 1133 219 36 0 0 chr15 71927070 71927098 -31567876 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 5 1133 301 252 56 9 chr15 71927766 71927874 -31567100 - L1M5 LINE L1 -529 5644 5532 5 1133 580 118 0 0 chr15 71928643 71928728 -31566246 - BC1_Mm scRNA scRNA -67 85 1 5 1133 283 319 0 8 chr15 71928782 71928902 -31566072 + (CA)n Simple_repeat Simple_repeat 1 119 0 5 1133 274 285 43 106 chr15 71929059 71929220 -31565754 + MLT1F LTR MaLR 256 406 -142 5 1133 669 322 82 62 chr15 71929284 71930163 -31564811 + MLT1F-int LTR MaLR 1 1002 -487 5 1133 5994 41 10 0 chr15 71930182 71930895 -31564079 - L1Md_T LINE L1 0 6582 5863 5 1133 339 295 129 43 chr15 71931031 71931194 -31563780 + MLT1F-int LTR MaLR 1129 1305 -104 5 1133 369 0 0 0 chr15 71931209 71931250 -31563724 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1133 387 0 0 0 chr15 71931250 71931292 -31563682 + (GA)n Simple_repeat Simple_repeat 1 43 0 5 1133 34 24 0 0 chr15 71931386 71931427 -31563547 + AT_rich Low_complexity Low_complexity 1 41 0 5 1133 275 0 29 0 chr15 71931607 71931642 -31563332 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 1133 701 242 88 10 chr15 71931650 71931842 -31563132 - B3 SINE B2 -2 214 8 5 1133 387 0 0 0 chr15 71932023 71932066 -31562908 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1133 590 316 88 19 chr15 71932776 71933037 -31561937 + B4A SINE B4 1 279 -13 5 1133 369 0 0 0 chr15 71933053 71933094 -31561880 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1133 25 0 0 0 chr15 71933162 71933187 -31561787 + AT_rich Low_complexity Low_complexity 1 25 0 5 1133 569 297 53 86 chr15 71933395 71933697 -31561277 - B4A SINE B4 0 292 1 5 1133 4534 44 4 0 chr15 71934153 71934695 -31560279 - L1Md_F2 LINE L1 -12 6570 6027 5 1133 504 0 0 0 chr15 71934880 71934936 -31560038 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 1133 296 291 23 35 chr15 71935478 71935649 -31559325 + (TATG)n Simple_repeat Simple_repeat 2 170 0 5 1133 477 0 0 0 chr15 71936897 71936950 -31558024 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1133 321 348 47 28 chr15 71937436 71937690 -31557284 + MER46C DNA MER2_type 80 338 0 5 1133 468 0 0 0 chr15 71938362 71938414 -31556560 + (TC)n Simple_repeat Simple_repeat 1 52 0 5 1133 369 0 0 0 chr15 71938414 71938454 -31556520 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1133 299 312 71 9 chr15 71938610 71938723 -31556251 - MLT1B LTR MaLR -19 371 236 5 1133 1179 0 0 0 chr15 71938754 71938885 -31556089 + (GGAGA)n Simple_repeat Simple_repeat 1 131 0 5 1133 245 317 0 0 chr15 71939241 71939323 -31555651 - RMER1C Other Other 0 1342 1261 5 1133 381 310 18 48 chr15 71939304 71939470 -31555504 - Lx8 LINE L1 -72 7401 7241 5 1133 1860 106 4 4 chr15 71939862 71940136 -31554838 - Lx2 LINE L1 0 6997 6724 5 1133 3253 23 0 0 chr15 71943348 71943694 -31551280 + ORR1A0 LTR MaLR 1 346 0 5 1133 15050 55 2 2 chr15 71943694 71945487 -31549487 + ORR1A0-int LTR MaLR 1 1792 0 5 1133 3093 32 3 6 chr15 71945487 71945834 -31549140 + ORR1A0 LTR MaLR 1 346 0 5 1133 2596 101 3 0 chr15 71946193 71946519 -31548455 + ORR1A2 LTR MaLR 1 327 0 5 1133 479 217 132 0 chr15 71946587 71946693 -31548281 + RSINE1 SINE B4 10 129 -36 5 1133 342 98 0 0 chr15 71946726 71946777 -31548197 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1133 201 74 0 0 chr15 71946795 71946822 -31548152 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1133 423 260 0 10 chr15 71948318 71948415 -31546559 + PB1D10 SINE Alu 11 106 -11 5 1133 418 324 17 12 chr15 71949112 71949284 -31545690 + MLT1F1 LTR MaLR 395 567 -2 5 1133 672 234 31 79 chr15 71949994 71950221 -31544753 - B3 SINE B2 0 216 1 5 1133 407 343 36 22 chr15 71950284 71950421 -31544553 - B1F1 SINE Alu -1 148 10 5 1133 1797 208 60 161 chr15 71950801 71951439 -31543535 - Lx5 LINE L1 0 7050 6478 5 1133 18595 148 133 9 chr15 71951429 71955432 -31539542 - Lx5 LINE L1 -748 6302 1798 5 1133 304 206 0 0 chr15 71955430 71955503 -31539471 - Lx5 LINE L1 -6672 1056 984 5 1133 383 256 46 15 chr15 71956492 71956623 -31538351 - L1MA9 LINE L1 -174 6138 6004 5 1133 781 219 14 0 chr15 71956845 71956991 -31537983 + B1_Mur1 SINE Alu 1 148 -1 5 1133 462 316 60 8 chr15 71957028 71957280 -31537694 + L1M3 LINE L1 5541 5805 -366 5 1133 305 302 48 0 chr15 71957588 71957714 -31537260 + L1MA10 LINE L1 6193 6324 -10 5 1133 22 0 0 0 chr15 71957742 71957764 -31537210 + AT_rich Low_complexity Low_complexity 1 22 0 5 1133 592 217 8 0 chr15 71957952 71958072 -31536902 + Lx8 LINE L1 6999 7119 -354 5 1133 210 71 0 0 chr15 71958076 71958104 -31536870 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1133 252 0 0 0 chr15 71958104 71958131 -31536843 + (GA)n Simple_repeat Simple_repeat 2 29 0 5 1133 351 163 22 55 chr15 71958165 71958256 -31536718 - RLTR21 LTR ERVK -318 1254 1167 5 141 311 204 98 104 chr15 71958455 71958619 -31536355 + Lx8 LINE L1 7303 7465 -8 5 1134 594 51 0 0 chr15 71960176 71960254 -31534720 + (TC)n Simple_repeat Simple_repeat 1 78 0 5 1134 571 69 184 0 chr15 71960254 71960341 -31534633 - B1_Mus1 SINE Alu -45 103 1 5 1134 30 27 0 0 chr15 71960441 71960478 -31534496 + AT_rich Low_complexity Low_complexity 1 37 0 5 1134 685 176 19 0 chr15 71960567 71960675 -31534299 - B1_Mur1 SINE Alu -16 133 24 5 1134 1181 280 104 6 chr15 71960714 71960872 -31534102 + MTE2b LTR MaLR 1 169 -210 5 1134 234 0 0 0 chr15 71960872 71960898 -31534076 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 1134 1181 280 104 6 chr15 71960898 71961084 -31533890 + MTE2b LTR MaLR 170 378 -1 5 1134 182 358 0 0 chr15 71961273 71961340 -31533634 - L2 LINE L2 -850 2569 2503 6 1134 1067 191 28 167 chr15 71961391 71961578 -31533396 - Lx7 LINE L1 0 7696 7520 6 1134 201 39 0 0 chr15 71961578 71961604 -31533370 + (TAAAA)n Simple_repeat Simple_repeat 5 30 0 6 1134 1067 191 28 167 chr15 71961604 71961681 -31533293 - Lx7 LINE L1 -177 7519 7455 6 1134 1181 103 7 0 chr15 71961681 71961827 -31533147 + B1_Mus2 SINE Alu 1 147 0 6 1134 1067 191 28 167 chr15 71961827 71961957 -31533017 - Lx7 LINE L1 -242 7454 7356 6 1134 267 103 0 0 chr15 71961957 71961996 -31532978 + (GGA)n Simple_repeat Simple_repeat 1 39 0 6 1134 211 120 58 39 chr15 71961996 71962048 -31532926 + A-rich Low_complexity Low_complexity 3 55 0 6 1134 771 211 0 0 chr15 71962059 71962206 -31532768 - Lx7 LINE L1 -355 7341 7195 6 1134 490 336 138 65 chr15 71962292 71963182 -31531792 - L2 LINE L2 -1041 2378 1424 6 1134 1134 235 41 11 chr15 71963516 71963787 -31531187 - ORR1D2 LTR MaLR 0 370 92 6 1134 1345 261 58 17 chr15 71963863 71964222 -31530752 + MTE2b LTR MaLR 1 374 -5 6 1134 185 275 28 28 chr15 71964726 71964797 -31530177 + MIR3 SINE MIR 91 161 -47 6 1134 750 340 102 30 chr15 71966255 71966688 -31528286 - MLT1D LTR MaLR -21 484 21 6 1134 633 336 55 27 chr15 71967086 71967343 -31527631 + B4A SINE B4 2 265 -27 6 1134 21 0 0 0 chr15 71967750 71967771 -31527203 + AT_rich Low_complexity Low_complexity 1 21 0 6 1134 230 268 81 47 chr15 71968209 71968295 -31526679 + MIRm SINE MIR 95 183 -85 6 1134 1247 304 28 29 chr15 71969693 71970089 -31524885 - MTE2b LTR MaLR 0 419 3 6 1134 810 276 100 19 chr15 71970658 71970927 -31524047 + ERVL-B4-int LTR ERVL 4197 4487 -1227 6 1134 559 68 0 0 chr15 71970946 71971019 -31523955 - B1_Mm SINE Alu -1 146 74 6 1134 408 342 48 24 chr15 71971241 71971406 -31523568 + LTR41 LTR ERVL 47 215 -553 6 1134 1228 257 40 40 chr15 71971453 71971805 -31523169 + ORR1D2 LTR MaLR 3 354 -16 6 1134 296 286 103 35 chr15 71972281 71972397 -31522577 - MER94 DNA AcHobo -9 125 2 6 1134 10913 64 1 17 chr15 71973329 71974751 -31520223 + L1Md_F2 LINE L1 4187 5586 -297 6 1134 8463 52 1 5 chr15 71974751 71975739 -31519235 + L1Md_F2 LINE L1 5587 6570 -12 6 1134 210 167 0 0 chr15 71976428 71976464 -31518510 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 1134 675 233 75 0 chr15 71976728 71976874 -31518100 + B3A SINE B2 4 160 -38 6 1134 879 37 0 0 chr15 71976881 71976988 -31517986 + (CA)n Simple_repeat Simple_repeat 2 108 0 6 1134 180 111 0 0 chr15 71977338 71977365 -31517609 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1134 237 65 0 0 chr15 71977839 71977870 -31517104 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 6 1134 402 325 70 53 chr15 71978606 71978883 -31516091 + MTEb LTR MaLR 56 360 -19 6 1134 321 345 40 13 chr15 71979405 71979555 -31515419 - B4 SINE B4 -137 155 2 6 1134 314 342 35 47 chr15 71980460 71980629 -31514345 - MLT1L LTR MaLR -41 569 403 6 1134 22 35 0 0 chr15 71980938 71980967 -31514007 + AT_rich Low_complexity Low_complexity 1 29 0 6 1134 213 175 0 0 chr15 71981431 71981471 -31513503 + CT-rich Low_complexity Low_complexity 3 42 0 6 1134 444 308 80 40 chr15 71981705 71981881 -31513093 + B3A SINE B2 14 196 -2 6 1134 2055 178 94 0 chr15 71982651 71983011 -31511963 - ORR1B1 LTR MaLR 0 394 1 6 1134 556 284 50 80 chr15 71983292 71983591 -31511383 + B4A SINE B4 1 290 -2 6 1134 206 32 32 0 chr15 71984038 71984069 -31510905 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 6 1134 525 295 129 62 chr15 71984137 71984686 -31510288 + L1MA5 LINE L1 5702 6287 -13 6 1134 433 243 9 0 chr15 71984693 71984800 -31510174 + L1MA5 LINE L1 6170 6277 -23 6 1134 584 176 70 7 chr15 71984839 71984982 -31509992 - Lx9 LINE L1 -6 7638 7487 6 1134 236 262 32 16 chr15 71985115 71985177 -31509797 - B1_Mur3 SINE Alu -52 97 35 6 1134 954 204 12 6 chr15 71985177 71985345 -31509629 - Lx5 LINE L1 -277 6773 6605 6 1134 407 196 20 10 chr15 71986262 71986360 -31508614 + Lx9 LINE L1 7538 7636 -8 6 1134 2104 152 68 39 chr15 71987715 71988098 -31506876 + ORR1B1 LTR MaLR 1 394 0 6 1134 25 0 0 0 chr15 71989602 71989627 -31505347 + AT_rich Low_complexity Low_complexity 1 25 0 6 1134 262 250 0 0 chr15 71990671 71990727 -31504247 + B1_Mus1 SINE Alu 1 56 -92 6 1134 547 236 0 0 chr15 71990785 71990891 -31504083 + B1_Mus2 SINE Alu 42 147 0 6 1134 236 100 0 24 chr15 71990933 71990974 -31504000 + (CTA)n Simple_repeat Simple_repeat 1 40 0 6 1134 2048 125 175 14 chr15 71991209 71991558 -31503416 + RLTR44A LTR ERVK 1 405 0 6 1134 333 158 5 30 chr15 71992402 71992475 -31502499 - MTC LTR MaLR -8 413 339 6 1134 4540 35 4 2 chr15 71993283 71993793 -31501181 + L1Md_F3 LINE L1 6074 6584 0 6 1134 2118 122 13 6 chr15 71994020 71994333 -31500641 + MERVL_2A-int LTR ERVL 2398 2712 -3049 6 1134 1207 183 0 5 chr15 71994332 71994530 -31500444 + MERVL_2A-int LTR ERVL 4818 5014 -747 6 1134 3831 140 3 14 chr15 71994527 71995114 -31499860 + MERVL_2A-int LTR ERVL 1077 1657 -4104 6 1134 456 155 0 0 chr15 71995114 71995185 -31499789 + MT2B LTR ERVL 1 71 -530 6 1134 1451 185 14 14 chr15 71995182 71995462 -31499512 + MT2B LTR ERVL 322 601 0 6 1134 28 71 0 0 chr15 71995968 71996024 -31498950 + AT_rich Low_complexity Low_complexity 1 56 0 6 1134 270 96 57 19 chr15 71996405 71996458 -31498516 - Lx6 LINE L1 -8 7452 7398 6 1134 522 0 0 0 chr15 71996460 71996518 -31498456 + (TC)n Simple_repeat Simple_repeat 2 59 0 6 1134 4364 222 107 12 chr15 71996518 71997563 -31497411 - Lx6 LINE L1 -142 7318 6175 6 1134 246 293 87 39 chr15 71997573 71997676 -31497298 - B1_Mur4 SINE Alu -10 140 33 6 1134 427 206 36 73 chr15 72000328 72000438 -31494536 + PB1D9 SINE Alu 2 107 -13 1 1134 315 0 0 0 chr15 72000440 72000475 -31494499 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1134 704 208 87 48 chr15 72000487 72000694 -31494280 + MTD LTR MaLR 1 215 -204 3 1134 2956 223 60 22 chr15 72000701 72001379 -31493595 + Lx6 LINE L1 6583 7286 -174 4 1134 311 257 27 0 chr15 72001462 72001536 -31493438 + Lx7 LINE L1 7219 7294 -402 5 1134 25 65 0 0 chr15 72001740 72001786 -31493188 + AT_rich Low_complexity Low_complexity 1 46 0 6 1134 524 229 163 45 chr15 72001791 72001969 -31493005 + MTD LTR MaLR 217 415 -4 3 1134 615 14 0 0 chr15 72002409 72002481 -31492493 + (TTTC)n Simple_repeat Simple_repeat 2 73 0 7 1134 25 0 0 0 chr15 72003009 72003034 -31491940 + AT_rich Low_complexity Low_complexity 1 25 0 8 1134 347 299 98 30 chr15 72004517 72004720 -31490254 - L1MEc LINE L1 -5128 1272 1056 9 1134 22 0 0 0 chr15 72005363 72005385 -31489589 + GC_rich Low_complexity Low_complexity 1 22 0 1 1134 1441 206 101 21 chr15 72006839 72007176 -31487798 - ORR1D2 LTR MaLR -4 366 3 1 1134 229 239 0 101 chr15 72007637 72007716 -31487258 - L1M LINE L1 -1119 5325 5255 1 1134 1093 220 168 38 chr15 72009036 72009352 -31485622 - ORR1D2 LTR MaLR -6 364 8 1 1134 657 223 66 75 chr15 72009361 72009589 -31485385 - ORR1D2-int LTR MaLR -147 1223 998 1 1134 227 327 104 8 chr15 72009760 72009883 -31485091 + MIR3 SINE MIR 1 131 -137 1 1134 702 290 90 39 chr15 72010776 72011088 -31483886 - ORR1E LTR MaLR -31 328 1 1 1134 690 180 74 0 chr15 72011724 72011846 -31483128 + B1_Mur3 SINE Alu 8 138 -11 1 1134 423 0 0 0 chr15 72012036 72012083 -31482891 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1134 2626 206 8 15 chr15 72012878 72013400 -31481574 + RLTR12B LTR ERVK 1 518 -10 1 1134 465 267 127 54 chr15 72014450 72014874 -31480100 + L1MCb LINE L1 529 983 -5062 1 1134 374 299 50 68 chr15 72015362 72015581 -31479393 + L1MCb LINE L1 1219 1433 -5318 1 1134 189 0 0 0 chr15 72015876 72015897 -31479077 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1134 1337 266 49 52 chr15 72016724 72017171 -31477803 + Lx8 LINE L1 6772 7217 -256 2 1134 242 251 277 11 chr15 72017212 72017389 -31477585 + L1M2 LINE L1 3802 4025 -2115 2 1134 1990 194 25 29 chr15 72019637 72020045 -31474929 + MTC LTR MaLR 8 413 -8 2 1134 1692 85 263 8 chr15 72020787 72021049 -31473925 - ORR1A4 LTR MaLR 0 329 1 2 1134 1131 261 73 81 chr15 72021154 72021572 -31473402 - MTD LTR MaLR -20 399 1 2 1134 255 246 0 50 chr15 72022363 72022423 -31472551 + ID4_ SINE ID 6 62 -21 2 1134 442 312 106 89 chr15 72022717 72023065 -31471909 - MTEa LTR MaLR 0 379 26 2 1134 192 242 145 0 chr15 72023256 72023318 -31471656 + MIRb SINE MIR 65 135 -133 2 1134 561 175 7 14 chr15 72025138 72025277 -31469697 + (TA)n Simple_repeat Simple_repeat 2 139 0 2 1134 181 328 122 22 chr15 72025493 72025674 -31469300 - MIRb SINE MIR -3 265 67 3 1134 972 231 159 67 chr15 72025859 72026090 -31468884 - MTD LTR MaLR -13 406 136 3 1134 786 31 0 0 chr15 72026090 72026187 -31468787 + (CA)n Simple_repeat Simple_repeat 1 97 0 3 1134 972 231 159 67 chr15 72026187 72026327 -31468647 - MTD LTR MaLR -284 135 1 3 1134 395 305 84 54 chr15 72027710 72027949 -31467025 + L1M5 LINE L1 5566 5811 -313 3 1134 857 244 191 22 chr15 72028551 72028865 -31466109 - ORR1D2 LTR MaLR 0 370 4 3 1134 716 291 24 21 chr15 72029368 72029586 -31465388 - ID_B1 SINE B4 -68 224 9 3 1134 609 247 153 24 chr15 72030781 72030951 -31464023 + MTD LTR MaLR 1 192 -227 3 1134 363 228 65 56 chr15 72032831 72032938 -31462036 + MER20 DNA MER1_type 111 218 -1 3 1134 374 269 34 174 chr15 72033194 72033401 -31461573 - B3A SINE B2 -1 197 20 3 1134 903 263 95 0 chr15 72033919 72034151 -31460823 - MTEa LTR MaLR -125 254 1 3 1134 727 173 55 18 chr15 72035926 72036091 -31458883 + L1MA6 LINE L1 6124 6294 -6 4 1134 288 0 0 0 chr15 72037303 72037335 -31457639 + (TAA)n Simple_repeat Simple_repeat 2 33 0 4 1134 2111 210 126 15 chr15 72037801 72038319 -31456655 - RMER1C Other Other -1 1341 767 4 1134 237 83 0 0 chr15 72039460 72039496 -31455478 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 1134 435 245 60 73 chr15 72039721 72039871 -31455103 - HAL1-3A_ME LINE L1 -735 2123 1976 4 1134 347 194 28 0 chr15 72039902 72039974 -31455000 - HAL1-3A_ME LINE L1 -829 2029 1956 4 1134 3489 145 2 60 chr15 72040996 72041036 -31453938 + RMER4B LTR ERVK 17 40 -545 4 1134 186 43 0 0 chr15 72041036 72041059 -31453915 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 4 1134 3489 145 2 60 chr15 72041059 72041621 -31453353 + RMER4B LTR ERVK 41 584 -1 4 1134 26 0 0 0 chr15 72044427 72044453 -31450521 + AT_rich Low_complexity Low_complexity 1 26 0 4 1134 444 264 69 32 chr15 72044986 72045233 -31449741 + L1MC LINE L1 2920 3175 -2971 4 1134 8223 53 5 2 chr15 72045222 72046519 -31448455 + L1_Mus1 LINE L1 5266 6567 0 4 1134 808 301 115 12 chr15 72046497 72047143 -31447831 + L1MC LINE L1 3116 3827 -2319 4 1134 291 258 31 31 chr15 72047121 72047217 -31447757 + L1M5 LINE L1 5347 5442 -737 5 1134 403 309 87 33 chr15 72047236 72047477 -31447497 + L1M5 LINE L1 5520 5773 -406 5 1134 225 94 0 0 chr15 72047731 72047763 -31447211 + (T)n Simple_repeat Simple_repeat 1 32 0 5 1134 271 365 29 14 chr15 72049533 72049672 -31445302 + MIR SINE MIR 17 157 -105 5 1134 516 295 98 32 chr15 72052112 72052463 -31442511 - L1MA4A LINE L1 -297 6003 5649 5 1134 400 273 207 7 chr15 72052460 72052600 -31442374 + Lx8 LINE L1 7160 7327 -146 5 1134 302 259 143 0 chr15 72052624 72052736 -31442238 - L1MA4A LINE L1 -898 5245 5118 5 1134 1075 285 55 68 chr15 72052838 72053232 -31441742 - L1MA4A LINE L1 -1051 5092 4679 5 1134 840 20 0 0 chr15 72053232 72053330 -31441644 + (TG)n Simple_repeat Simple_repeat 2 99 0 5 1134 1075 285 55 68 chr15 72053330 72053481 -31441493 - L1MA4A LINE L1 -1465 4678 4554 5 1134 1241 122 69 30 chr15 72053536 72053739 -31441235 - L1Md_F3 LINE L1 0 6584 6374 5 1134 259 338 94 69 chr15 72053958 72054203 -31440771 - MER45B DNA Tip100 -307 733 483 5 1134 186 308 0 44 chr15 72055278 72055346 -31439628 - L2c LINE L2 -236 3151 3087 5 1134 447 302 37 12 chr15 72055621 72055782 -31439192 + RMER15 LTR ERVL 363 527 -48 5 1134 1868 141 22 32 chr15 72058017 72058332 -31436642 - Lx5 LINE L1 -2 7048 6737 6 1134 1838 173 38 6 chr15 72058332 72058646 -31436328 - Lx5 LINE L1 -505 6545 6222 6 1134 369 0 0 0 chr15 72058674 72058715 -31436259 + (TC)n Simple_repeat Simple_repeat 1 41 0 6 1134 216 245 184 0 chr15 72059005 72059054 -31435920 - ID4_ SINE ID -11 72 15 6 1134 436 282 94 39 chr15 72059359 72059540 -31435434 + MLT1C LTR MaLR 274 464 -3 6 1134 198 118 0 0 chr15 72059755 72059789 -31435185 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1134 367 252 48 19 chr15 72059791 72059896 -31435078 + MTEa LTR MaLR 264 371 -8 6 1134 356 330 75 28 chr15 72059908 72060120 -31434854 + MLT2B3 LTR ERVL 4 225 -329 6 1134 21 36 0 0 chr15 72061841 72061869 -31433105 + AT_rich Low_complexity Low_complexity 1 28 0 6 1134 613 286 72 78 chr15 72061944 72062056 -31432918 - Lx9 LINE L1 -285 7359 7227 6 1134 216 122 0 0 chr15 72062056 72062097 -31432877 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 6 1134 613 286 72 78 chr15 72062097 72062318 -31432656 - Lx9 LINE L1 -418 7226 7029 6 1134 378 229 21 14 chr15 72064176 72064318 -31430656 - Lx9 LINE L1 0 7644 7502 7 1134 4126 205 19 17 chr15 72064322 72065159 -31429815 + Lx9 LINE L1 6591 7429 -215 7 1134 263 221 0 68 chr15 72065173 72065246 -31429728 - L1P5 LINE L1 -287 5869 5802 7 1134 417 54 0 0 chr15 72065262 72065318 -31429656 + (TG)n Simple_repeat Simple_repeat 1 56 0 7 1134 334 279 0 0 chr15 72065324 72065392 -31429582 + Lx8 LINE L1 7175 7242 -231 7 1134 542 209 9 9 chr15 72065402 72065513 -31429461 + MTC LTR MaLR 1 111 -310 7 1134 825 291 45 60 chr15 72065516 72065914 -31429060 - RMER19C LTR ERVK 0 611 220 7 1134 675 131 106 65 chr15 72066193 72066457 -31428517 - ORR1C2 LTR MaLR 0 384 111 7 1134 3775 139 16 3 chr15 72066457 72067085 -31427889 - L1_Mur2 LINE L1 -492 5385 4750 7 1134 1511 233 30 76 chr15 72067208 72067816 -31427158 - RLTR31_Mur LTR ERVK 0 553 1 7 1134 4809 143 4 4 chr15 72068006 72068756 -31426218 - Lx2B LINE L1 -30 5847 5098 7 1134 4613 191 111 19 chr15 72068751 72069819 -31425155 + Lx2B LINE L1 5833 6998 -2 7 1134 182 128 0 25 chr15 72070100 72070140 -31424834 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 1134 1057 251 97 26 chr15 72070289 72070910 -31424064 + L1MD LINE L1 5085 5747 -495 8 1134 290 317 34 118 chr15 72071016 72071220 -31423754 + B4A SINE B4 2 188 -104 8 1134 23 0 0 0 chr15 72071334 72071357 -31423617 + AT_rich Low_complexity Low_complexity 1 23 0 8 1134 306 300 30 10 chr15 72071710 72071811 -31423163 - B4 SINE B4 -188 104 2 8 1134 311 308 36 36 chr15 72072660 72072798 -31422176 + MLT1A0 LTR MaLR 27 164 -201 8 1134 259 281 0 0 chr15 72072810 72072867 -31422107 + B3 SINE B2 74 130 -86 8 1134 21 0 0 0 chr15 72072916 72072937 -31422037 + AT_rich Low_complexity Low_complexity 1 21 0 8 1134 594 259 25 0 chr15 72072939 72073097 -31421877 + MLT1A0 LTR MaLR 143 304 -61 8 1134 23666 103 12 23 chr15 72073111 72075861 -31419113 - L1_Mus3 LINE L1 -2 6639 3939 8 1134 1054 110 0 0 chr15 72075861 72076007 -31418967 - B1_Mus1 SINE Alu 0 148 3 8 1134 23666 116 13 36 chr15 72076007 72076643 -31418331 - L1_Mus3 LINE L1 -1948 3938 3312 8 1134 308 43 22 0 chr15 72076643 72076689 -31418285 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 9 1134 23666 116 13 36 chr15 72076689 72077880 -31417094 - L1_Mus3 LINE L1 -2575 3311 2145 8 1134 7611 80 8 2 chr15 72077873 72079048 -31415926 - L1Md_F2 LINE L1 0 6582 5391 9 1134 5496 79 10 8 chr15 72079029 72080083 -31414891 - L1_Mus3 LINE L1 -3934 1952 799 8 1134 540 110 87 11 chr15 72080082 72080174 -31414800 - L1VL1 LINE L1 -6323 99 1 9 1134 6488 83 8 7 chr15 72080175 72080453 -31414521 - L1Md_Gf LINE L1 -3723 2163 1885 9 1134 3039 32 0 0 chr15 72080453 72080799 -31414175 + ORR1A0 LTR MaLR 1 346 0 9 1134 6488 96 13 6 chr15 72080799 72081780 -31413194 - L1Md_Gf LINE L1 -4002 1884 799 9 1134 540 110 87 11 chr15 72081779 72081871 -31413103 - L1VL1 LINE L1 -6323 99 1 9 1134 6488 83 8 7 chr15 72081872 72082150 -31412824 - L1Md_Gf LINE L1 -3723 2163 1885 9 1134 3039 32 0 0 chr15 72082150 72082496 -31412478 + ORR1A0 LTR MaLR 1 346 0 9 1134 6488 96 13 6 chr15 72082496 72083477 -31411497 - L1Md_Gf LINE L1 -4002 1884 799 9 1134 540 110 87 11 chr15 72083476 72083568 -31411406 - L1VL1 LINE L1 -6323 99 1 9 1134 6133 93 12 14 chr15 72083569 72083847 -31411127 - L1VL4 LINE L1 -1756 1803 1527 9 1134 3039 32 0 0 chr15 72083847 72084193 -31410781 + ORR1A0 LTR MaLR 1 346 0 9 1134 6133 108 11 36 chr15 72084193 72085034 -31409940 - L1VL4 LINE L1 -2033 1526 765 9 1134 6437 35 0 0 chr15 72085034 72085779 -31409195 - L1Md_T LINE L1 0 6582 5838 9 1134 1009 0 0 0 chr15 72085779 72085886 -31409088 - U6 snRNA snRNA 0 107 1 1 1134 2944 170 7 131 chr15 72085886 72086305 -31408669 - L1VL4 LINE L1 -5538 764 355 9 1134 406 233 39 10 chr15 72086307 72086411 -31408563 - L1Md_F LINE L1 -5815 704 598 1 1134 351 0 0 0 chr15 72086563 72086602 -31408372 + (TTG)n Simple_repeat Simple_repeat 1 39 0 1 1134 322 288 104 18 chr15 72086966 72087228 -31407746 - MER33 DNA MER1_type -1 323 34 1 1134 21 0 0 0 chr15 72088374 72088395 -31406579 + AT_rich Low_complexity Low_complexity 1 21 0 1 1135 1326 236 15 30 chr15 72089708 72090037 -31404937 + Lx9 LINE L1 7142 7467 -177 1 1135 204 40 0 0 chr15 72090037 72090062 -31404912 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 1 1135 444 370 36 55 chr15 72090062 72090076 -31404898 + Lx9 LINE L1 7336 7342 -131 1 1135 324 0 0 0 chr15 72090076 72090112 -31404862 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1135 444 370 36 55 chr15 72090112 72090187 -31404787 + Lx8 LINE L1 7343 7421 -52 1 1135 222 364 0 33 chr15 72092399 72092490 -31402484 + PB1D10 SINE Alu 29 116 -1 1 1135 5538 137 88 6 chr15 72093346 72094365 -31400609 - RLTR25A LTR ERVK 0 1103 1 1 1135 414 0 0 0 chr15 72095986 72096032 -31398942 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1135 387 0 0 0 chr15 72096032 72096074 -31398900 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 1135 2011 137 180 2 chr15 72096454 72096854 -31398120 + RLTR11A LTR ERVK 1 471 -57 1 1135 341 299 27 45 chr15 72098350 72098462 -31396512 + RSINE1 SINE B4 51 160 -5 1 1135 784 221 52 57 chr15 72098713 72098924 -31396050 - B3 SINE B2 -5 211 2 1 1135 952 161 162 25 chr15 72099775 72099973 -31395001 + URR1A DNA MER1_type 2 226 0 1 1135 279 256 26 0 chr15 72100565 72100643 -31394331 + L1M5 LINE L1 5678 5757 -367 1 1135 227 267 0 0 chr15 72101787 72101847 -31393127 + GA-rich Low_complexity Low_complexity 1 60 0 1 1135 1020 309 90 19 chr15 72102278 72102743 -31392231 + Tigger7 DNA MER2_type 59 556 -1935 1 1135 544 291 85 21 chr15 72102786 72103021 -31391953 + Tigger7 DNA MER2_type 2236 2485 -6 1 1135 25 0 0 0 chr15 72103884 72103909 -31391065 + AT_rich Low_complexity Low_complexity 1 25 0 1 1135 378 233 109 36 chr15 72104672 72104810 -31390164 - B1F SINE Alu -1 148 1 1 1135 229 218 73 0 chr15 72105754 72105809 -31389165 - MLT1H LTR MaLR -261 288 230 1 1135 234 312 30 79 chr15 72106257 72106358 -31388616 + B3A SINE B2 87 182 -16 1 1135 19432 161 28 19 chr15 72107809 72109239 -31385735 - Lx5 LINE L1 -3 7047 5603 1 1135 2100 143 19 83 chr15 72109239 72109659 -31385315 + RLTR9C LTR ERVK 1 393 0 1 1135 19432 138 52 18 chr15 72109659 72112901 -31382073 - Lx5 LINE L1 -275 5602 2281 1 1135 252 0 0 0 chr15 72113294 72113322 -31381652 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1 1135 315 161 0 0 chr15 72115644 72115700 -31379274 + (TGG)n Simple_repeat Simple_repeat 1 56 0 1 1135 1203 263 89 18 chr15 72115822 72116213 -31378761 + MTD LTR MaLR 1 419 0 1 1135 288 77 0 0 chr15 72116945 72116984 -31377990 + (TCCC)n Simple_repeat Simple_repeat 3 41 0 1 1135 262 167 40 27 chr15 72117075 72117149 -31377825 + GA-rich Low_complexity Low_complexity 1 75 0 1 1135 240 21 40 60 chr15 72118686 72118736 -31376238 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 1 1135 1228 47 0 13 chr15 72118738 72118888 -31376086 - B1_Mus1 SINE Alu 0 148 1 1 1135 516 317 0 0 chr15 72119758 72119903 -31375071 - Lx7 LINE L1 -791 6905 6761 1 1135 715 316 64 29 chr15 72119910 72120255 -31374719 + Lx8 LINE L1 6964 7320 -153 1 1135 618 14 0 0 chr15 72120257 72120328 -31374646 + (GA)n Simple_repeat Simple_repeat 2 72 0 1 1135 312 299 99 41 chr15 72120618 72120789 -31374185 - L1MB1 LINE L1 -337 5975 5795 1 1135 333 0 0 0 chr15 72120789 72120826 -31374148 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 1135 193 93 93 0 chr15 72120919 72120962 -31374012 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 1 1135 240 265 44 140 chr15 72121016 72121070 -31373904 - L1MB1 LINE L1 -475 5714 5671 1 1135 468 311 47 37 chr15 72121070 72121260 -31373714 - B3A SINE B2 -5 193 2 1 1135 240 265 44 140 chr15 72121260 72121341 -31373633 - L1MB1 LINE L1 -519 5670 5592 1 1135 482 29 0 29 chr15 72121357 72121427 -31373547 - B1_Mm SINE Alu 0 147 80 1 1135 594 310 61 21 chr15 72121430 72121979 -31372995 - L1MB1 LINE L1 -576 5613 5048 1 1135 370 227 180 0 chr15 72121976 72122104 -31372870 + L1MB1 LINE L1 5922 6072 -96 1 1135 450 49 0 0 chr15 72122167 72122228 -31372746 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1135 208 250 18 18 chr15 72123106 72123163 -31371811 - MIR SINE MIR -172 90 34 1 1135 475 173 250 8 chr15 72123168 72123296 -31371678 + Lx5 LINE L1 6892 7050 0 1 1135 27 29 0 0 chr15 72123332 72123366 -31371608 + AT_rich Low_complexity Low_complexity 1 34 0 1 1135 204 67 0 0 chr15 72123602 72123632 -31371342 + (A)n Simple_repeat Simple_repeat 1 30 0 1 1135 1058 243 78 20 chr15 72123757 72124114 -31370860 - RMER17C LTR ERVK -32 378 1 1 1135 286 243 148 34 chr15 72124226 72124375 -31370599 - L1M5 LINE L1 -386 5854 5689 1 1135 1690 205 52 30 chr15 72124884 72125178 -31369796 - MTC LTR MaLR -5 416 112 1 1135 690 157 125 151 chr15 72125178 72125410 -31369564 + URR1A DNA MER1_type 1 226 0 1 1135 1690 205 52 30 chr15 72125410 72125522 -31369452 - MTC LTR MaLR -310 111 1 1 1135 2903 33 191 0 chr15 72125683 72126049 -31368925 - RLTR10C LTR ERVK 0 436 1 1 1135 1249 248 67 3 chr15 72126386 72126717 -31368257 - ORR1D2 LTR MaLR -12 358 7 1 1135 756 178 26 0 chr15 72128016 72128168 -31366806 + ORR1D1 LTR MaLR 1 156 -218 1 1135 300 34 102 0 chr15 72128177 72128236 -31366738 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 1 1135 423 0 0 0 chr15 72128243 72128290 -31366684 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1135 241 339 39 68 chr15 72128500 72128706 -31366268 - MER57E1 LTR ERV1 -91 281 82 1 1135 1004 193 28 46 chr15 72130247 72130464 -31364510 - B3 SINE B2 -1 215 3 1 1135 363 258 111 70 chr15 72131107 72131396 -31363578 + RMER20A LTR ERVK 117 409 -218 1 1135 770 209 32 109 chr15 72131389 72131674 -31363300 - RLTR40 LTR ERVK -308 509 247 1 1135 26 50 0 0 chr15 72132156 72132196 -31362778 + AT_rich Low_complexity Low_complexity 1 40 0 1 1135 929 304 63 13 chr15 72133553 72133950 -31361024 + RMER5 LTR ERV1 33 449 -85 1 1135 802 126 21 0 chr15 72133966 72134109 -31360865 + (TTTC)n Simple_repeat Simple_repeat 3 148 0 1 1135 432 0 0 0 chr15 72134397 72134445 -31360529 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1 1135 344 300 19 26 chr15 72135653 72135807 -31359167 + GA-rich Low_complexity Low_complexity 2 154 0 1 1135 1752 165 30 73 chr15 72135829 72136227 -31358747 + RLTR41 LTR ERV1 66 446 0 1 1135 360 64 0 0 chr15 72137355 72137402 -31357572 + (TCC)n Simple_repeat Simple_repeat 3 49 0 1 1135 520 267 37 7 chr15 72138214 72138350 -31356624 - RSINE1 SINE B4 -23 142 3 1 1135 374 214 23 2 chr15 72138871 72138981 -31355993 - ORR1E LTR MaLR -2 377 257 1 1135 252 240 53 13 chr15 72139957 72140033 -31354941 + ID4_ SINE ID 2 80 -3 1 1135 1658 214 39 0 chr15 72140953 72141308 -31353666 + MTEa LTR MaLR 7 375 -4 1 1135 676 311 144 24 chr15 72141668 72142007 -31352967 + Tigger7 DNA MER2_type 37 416 -2075 1 1135 250 412 24 0 chr15 72143443 72143608 -31351366 - MER45A DNA Tip100 -8 170 2 1 1135 2919 78 44 0 chr15 72143863 72144246 -31350728 - MTB LTR MaLR 0 400 1 1 1135 2019 179 88 44 chr15 72146830 72147333 -31347641 - RLTR11A LTR ERVK 0 528 4 1 1135 923 235 11 30 chr15 72147971 72148235 -31346739 - RLTR20B3 LTR ERVK -107 470 181 1 1135 432 0 0 0 chr15 72148235 72148283 -31346691 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1135 875 254 90 44 chr15 72148283 72148430 -31346544 - RLTR20B3 LTR ERVK -348 180 16 1 1135 1027 283 134 24 chr15 72148635 72149113 -31345861 - Lx8 LINE L1 -1 7472 6922 1 1135 368 306 38 86 chr15 72149833 72150019 -31344955 + ORR1E LTR MaLR 16 192 -167 1 1135 257 265 30 20 chr15 72150099 72150199 -31344775 + ORR1E LTR MaLR 279 379 0 1 1135 212 279 158 41 chr15 72150267 72150413 -31344561 + MIRb SINE MIR 30 192 -76 1 1135 426 39 0 0 chr15 72150519 72150571 -31344403 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 1135 603 142 27 13 chr15 72150572 72150722 -31344252 + GA-rich Low_complexity Low_complexity 1 152 0 1 1135 925 296 79 12 chr15 72150722 72150975 -31343999 - B4A SINE B4 -22 270 1 1 1135 321 276 0 11 chr15 72152558 72152646 -31342328 + L1MA6 LINE L1 6177 6263 -37 1 1135 248 248 132 9 chr15 72152679 72152801 -31342173 + L1_Mus3 LINE L1 5721 5846 -792 1 1135 387 0 0 0 chr15 72152810 72152853 -31342121 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1135 348 111 0 0 chr15 72153037 72153091 -31341883 + (GGGA)n Simple_repeat Simple_repeat 4 57 0 1 1135 1731 172 118 0 chr15 72153704 72154042 -31340932 - ORR1C1 LTR MaLR 0 378 1 1 1135 1511 72 0 5 chr15 72154124 72154319 -31340655 - B2_Mm2 SINE B2 0 195 2 1 1135 803 284 53 21 chr15 72154385 72154666 -31340308 - B4 SINE B4 0 292 3 1 1135 602 224 52 29 chr15 72155218 72155477 -31339497 + L1M5 LINE L1 5168 5436 -728 1 1135 298 232 175 39 chr15 72155495 72155598 -31339376 + B1F SINE Alu 33 149 0 1 1135 1179 81 0 0 chr15 72155607 72155755 -31339219 + B1_Mus1 SINE Alu 1 148 0 1 1135 1053 181 21 56 chr15 72156191 72156425 -31338549 + URR1A DNA MER1_type 1 226 0 1 1135 622 261 55 41 chr15 72157343 72157563 -31337411 + RMER15 LTR ERVL 353 575 0 1 1135 4906 106 22 21 chr15 72157967 72158774 -31336200 - RLTR13C2 LTR ERVK 0 808 1 1 1135 211 208 0 54 chr15 72159681 72159737 -31335237 + (CATA)n Simple_repeat Simple_repeat 3 55 0 1 1135 880 263 36 29 chr15 72159904 72160182 -31334792 - B4A SINE B4 -8 284 5 1 1135 239 271 53 76 chr15 72160460 72160592 -31334382 - L1MEg LINE L1 -4533 1551 1423 1 1135 363 65 78 0 chr15 72160593 72160670 -31334304 + (TCTG)n Simple_repeat Simple_repeat 2 84 0 1 1135 414 0 0 0 chr15 72160671 72160717 -31334257 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1135 216 0 0 0 chr15 72160762 72160786 -31334188 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 1135 520 252 0 0 chr15 72161402 72161505 -31333469 + B3A SINE B2 1 103 -95 2 1135 396 0 0 0 chr15 72161969 72162013 -31332961 + (GA)n Simple_repeat Simple_repeat 1 44 0 2 1135 1244 251 60 11 chr15 72162684 72163035 -31331939 - MTEb LTR MaLR -11 368 1 2 1135 279 0 0 0 chr15 72163376 72163407 -31331567 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 1135 270 0 0 0 chr15 72163407 72163436 -31331538 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 1135 215 217 32 32 chr15 72163449 72163544 -31331430 + (TTATA)n Simple_repeat Simple_repeat 5 99 0 2 1135 186 43 0 0 chr15 72163571 72163594 -31331380 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 1135 742 242 123 44 chr15 72165380 72165631 -31329343 + B4A SINE B4 1 271 -21 2 1135 598 306 57 9 chr15 72165635 72165846 -31329128 + ID_B1 SINE B4 2 222 -2 2 1135 311 43 64 0 chr15 72165890 72165937 -31329037 + (GAAAA)n Simple_repeat Simple_repeat 5 54 0 2 1135 987 214 26 10 chr15 72166099 72166293 -31328681 - B3 SINE B2 0 216 20 2 1135 700 282 49 84 chr15 72167265 72167610 -31327364 + MLT1C LTR MaLR 28 360 -107 2 1135 240 291 8 100 chr15 72168090 72168220 -31326754 - L2a LINE L2 0 3426 3309 2 1135 197 211 19 0 chr15 72168714 72168766 -31326208 + CT-rich Low_complexity Low_complexity 6 58 0 2 1135 459 0 0 0 chr15 72169035 72169086 -31325888 + (GTTTG)n Simple_repeat Simple_repeat 2 52 0 2 1135 733 155 16 0 chr15 72169864 72169993 -31324981 - B1_Mur3 SINE Alu -9 140 10 2 1135 584 248 86 20 chr15 72170140 72170292 -31324682 - RLTR20D LTR ERVK 0 568 407 2 1135 311 253 21 21 chr15 72170281 72170374 -31324600 - RLTR20D LTR ERVK -285 283 191 2 1135 462 36 0 0 chr15 72170381 72170437 -31324537 + (TCC)n Simple_repeat Simple_repeat 1 56 0 2 1135 320 24 0 0 chr15 72170459 72170501 -31324473 + RLTR10B2 LTR ERVK 1 42 -250 2 1135 1858 94 84 39 chr15 72170523 72170856 -31324118 + RLTR10B2 LTR ERVK 18 365 0 2 1135 414 191 37 4 chr15 72170861 72170982 -31323992 - RLTR20D LTR ERVK -355 179 1 2 1135 822 262 73 63 chr15 72171300 72171649 -31323325 + ORR1E LTR MaLR 1 379 0 2 1135 531 333 127 21 chr15 72172335 72172675 -31322299 + MER89 LTR ERV1 184 559 0 2 1135 840 168 6 35 chr15 72174281 72174454 -31320520 + RMER20B LTR ERVK 1 168 -459 2 1135 880 145 6 22 chr15 72175358 72175541 -31319433 + GA-rich Low_complexity Low_complexity 1 180 0 2 1135 596 260 45 45 chr15 72176114 72176186 -31318788 - B3A SINE B2 0 216 153 2 1135 414 0 0 0 chr15 72176186 72176232 -31318742 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1135 596 249 53 24 chr15 72176232 72176378 -31318596 - B3A SINE B2 -44 154 1 2 1135 312 27 0 0 chr15 72177140 72177177 -31317797 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1135 244 270 90 0 chr15 72178800 72178900 -31316074 + L1MA4A LINE L1 5092 5200 -943 2 1135 1767 142 49 10 chr15 72178970 72179277 -31315697 - ORR1A2 LTR MaLR -8 319 1 2 1135 1131 258 31 153 chr15 72179610 72180218 -31314756 - RMER5 LTR ERV1 0 534 1 2 1135 370 257 112 62 chr15 72180234 72180458 -31314516 + L1MA4A LINE L1 5256 5490 -810 2 1135 290 270 34 0 chr15 72180530 72180619 -31314355 + B1F SINE Alu 49 140 -9 2 1135 506 289 146 49 chr15 72181628 72181956 -31313018 + L1MA4A LINE L1 5686 6045 -255 2 1135 742 287 77 27 chr15 72185087 72185424 -31309550 + ERVL-E-int LTR ERVL 3751 4104 -1563 2 1135 255 79 0 0 chr15 72185522 72185560 -31309414 + (T)n Simple_repeat Simple_repeat 1 38 0 2 1135 644 74 37 0 chr15 72185777 72185885 -31309089 + (TG)n Simple_repeat Simple_repeat 2 113 0 2 1135 260 282 50 25 chr15 72186763 72186843 -31308131 - MLT1A0 LTR MaLR -21 344 263 2 1135 1044 163 91 10 chr15 72186932 72187130 -31307844 + B3 SINE B2 2 215 -1 2 1135 984 225 99 4 chr15 72187413 72187685 -31307289 + Lx9 LINE L1 7346 7643 -1 2 1135 200 200 0 20 chr15 72187942 72187993 -31306981 + C-rich Low_complexity Low_complexity 6 55 0 2 1135 180 0 0 0 chr15 72188106 72188126 -31306848 + (TTCC)n Simple_repeat Simple_repeat 4 23 0 2 1135 287 202 13 0 chr15 72188260 72188339 -31306635 + (TG)n Simple_repeat Simple_repeat 2 81 0 2 1135 287 25 0 24 chr15 72189098 72189139 -31305835 + (CAAA)n Simple_repeat Simple_repeat 4 43 0 2 1135 554 261 30 8 chr15 72189210 72189341 -31305633 + ID_B1 SINE B4 88 221 -3 2 1135 414 254 20 88 chr15 72189432 72189579 -31305395 - ID_B1 SINE B4 -7 217 81 2 1135 432 0 0 0 chr15 72190432 72190480 -31304494 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1135 342 323 0 0 chr15 72190487 72190580 -31304394 - B4 SINE B4 -7 285 193 2 1135 298 121 190 0 chr15 72190597 72190655 -31304319 - B4 SINE B4 -73 219 151 2 1135 180 0 0 0 chr15 72191253 72191273 -31303701 + (CAGG)n Simple_repeat Simple_repeat 1 20 0 2 1135 480 270 246 41 chr15 72191867 72192184 -31302790 - Lx8 LINE L1 -35 7438 7057 2 1135 791 278 146 36 chr15 72192184 72192464 -31302510 + Lx8 LINE L1 6712 7022 -451 2 1135 24 0 0 0 chr15 72192977 72193001 -31301973 + AT_rich Low_complexity Low_complexity 1 24 0 2 1135 1113 148 10 26 chr15 72193345 72193539 -31301435 - B2_Mm2 SINE B2 -3 192 2 2 1135 467 215 132 0 chr15 72194025 72194146 -31300828 + L1MA6 LINE L1 5346 5482 -818 2 1135 1070 273 108 58 chr15 72194285 72194653 -31300321 + L1MA6 LINE L1 5530 5902 -398 2 1135 3998 52 0 2 chr15 72194653 72195132 -31299842 + L1_Mus1 LINE L1 6086 6563 -4 2 1135 1070 273 108 58 chr15 72195132 72195468 -31299506 + L1MA6 LINE L1 5903 6269 -31 2 1135 541 210 0 14 chr15 72195793 72195916 -31299058 - PB1D9 SINE Alu 0 120 3 2 1135 253 324 107 27 chr15 72196376 72196525 -31298449 + RSINE1 SINE B4 5 165 0 2 1135 990 189 5 20 chr15 72197538 72197738 -31297236 - RLTR22_Mur LTR ERVK -1649 199 3 2 1135 358 302 90 33 chr15 72197844 72198564 -31296410 + L1MD LINE L1 2437 3241 -2905 2 1135 790 299 54 22 chr15 72198832 72199139 -31295835 + L1MA5 LINE L1 5703 6018 -138 2 1135 26 64 0 0 chr15 72199220 72199267 -31295707 + AT_rich Low_complexity Low_complexity 1 47 0 2 1135 300 202 219 42 chr15 72199342 72199461 -31295513 + Lx8 LINE L1 7279 7418 -55 2 1135 486 266 68 13 chr15 72199487 72199678 -31295296 + L1MD LINE L1 4175 4375 -1771 2 1135 860 199 36 0 chr15 72199712 72199908 -31295066 + L1MA7 LINE L1 6085 6287 -4 2 1135 717 264 137 31 chr15 72200294 72200587 -31294387 - Lx8 LINE L1 -29 7444 7121 2 1135 236 239 0 0 chr15 72200589 72200635 -31294339 + L1_Mur1 LINE L1 5402 5447 -439 2 1135 182 191 21 0 chr15 72200670 72200717 -31294257 + A-rich Low_complexity Low_complexity 1 48 0 2 1135 463 159 23 0 chr15 72200716 72200852 -31294122 + GA-rich Low_complexity Low_complexity 1 139 0 2 1135 1059 239 90 42 chr15 72200875 72201323 -31293651 + Lx7 LINE L1 5432 5913 -1783 2 1135 399 254 45 0 chr15 72201352 72201462 -31293512 - ID_B1 SINE B4 -5 219 105 2 1135 622 264 157 0 chr15 72201471 72201649 -31293325 - B4A SINE B4 -86 206 1 2 1135 741 288 68 11 chr15 72202124 72202419 -31292555 + L1MA4 LINE L1 5338 5649 -651 2 1135 317 287 23 0 chr15 72202419 72202548 -31292426 + L1MA4 LINE L1 5775 5906 -394 2 1135 634 278 95 32 chr15 72202635 72202973 -31292001 + L1ME1 LINE L1 5707 6065 -114 2 1135 1677 58 0 30 chr15 72203960 72204196 -31290778 + L1Md_F2 LINE L1 6358 6582 0 2 1135 1677 58 0 30 chr15 72204196 72204223 -31290751 + L1Md_F2 LINE L1 6560 6582 0 2 1135 23 0 0 0 chr15 72204223 72204246 -31290728 + AT_rich Low_complexity Low_complexity 1 23 0 2 1135 716 254 56 10 chr15 72204436 72204631 -31290343 + B3 SINE B2 5 208 -8 2 1135 3229 137 31 10 chr15 72204735 72205251 -31289723 + RLTR11A LTR ERVK 1 527 -1 2 1135 525 250 179 65 chr15 72205410 72205611 -31289363 + B4A SINE B4 69 292 0 2 1135 416 300 13 13 chr15 72205612 72205764 -31289210 - L1MB3 LINE L1 -29 6154 6003 2 1135 417 308 174 7 chr15 72205861 72206005 -31288969 - B3A SINE B2 -30 168 1 2 1135 297 320 88 17 chr15 72206005 72206243 -31288731 - L1MB3 LINE L1 -358 5825 5571 2 1135 281 335 65 35 chr15 72206719 72206767 -31288207 - L2 LINE L2 -714 2705 2660 2 1135 234 0 0 0 chr15 72206767 72206793 -31288181 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 1135 281 335 65 35 chr15 72206793 72206945 -31288029 - L2 LINE L2 -760 2659 2499 2 1135 406 345 90 20 chr15 72207697 72208043 -31286931 - L2 LINE L2 -1377 2042 1673 2 1135 9350 51 0 4 chr15 72208330 72209468 -31285506 - L1_Mm LINE L1 -137 5746 4614 2 1135 242 278 44 11 chr15 72209572 72209663 -31285311 - MLT1A LTR MaLR -280 94 1 2 1135 658 276 9 14 chr15 72209928 72210150 -31284824 + L1MB1 LINE L1 5937 6163 -149 2 1135 180 231 103 62 chr15 72210245 72210342 -31284632 + MIRm SINE MIR 88 188 -88 2 1135 941 283 30 68 chr15 72210369 72210767 -31284207 - MLT1B LTR MaLR -5 385 3 2 1135 1517 42 6 0 chr15 72210924 72211106 -31283868 - L1Md_F2 LINE L1 -403 6179 5982 2 1135 3248 42 2 12 chr15 72211106 72211512 -31283462 + L1Md_F2 LINE L1 6181 6582 0 2 1135 1110 185 46 0 chr15 72211512 72211545 -31283429 - L1Md_F2 LINE L1 -586 5981 5948 2 1135 315 0 0 0 chr15 72212541 72212576 -31282398 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1135 398 110 0 24 chr15 72212578 72212662 -31282312 + (CAGAGA)n Simple_repeat Simple_repeat 2 83 0 2 1135 961 295 39 4 chr15 72212691 72212970 -31282004 - B4A SINE B4 -3 289 1 2 1135 243 0 0 0 chr15 72213479 72213506 -31281468 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2 1135 684 115 0 0 chr15 72213766 72213870 -31281104 + (TC)n Simple_repeat Simple_repeat 1 104 0 2 1135 236 362 100 8 chr15 72214233 72214492 -31280482 - MER68 LTR ERVL -189 374 92 2 1135 23 0 0 0 chr15 72215011 72215034 -31279940 + AT_rich Low_complexity Low_complexity 1 23 0 2 1135 618 218 60 13 chr15 72215034 72215183 -31279791 - RSINE1 SINE B4 -2 163 8 2 1135 372 293 42 24 chr15 72215366 72215534 -31279440 - MLT1D LTR MaLR -334 171 1 2 1135 442 317 51 36 chr15 72215679 72215769 -31279205 - Tigger1 DNA MER2_type 0 2418 2334 2 1135 1348 90 0 26 chr15 72215769 72215962 -31279012 - B2_Mm2 SINE B2 -7 188 1 2 1135 442 317 51 36 chr15 72215962 72216067 -31278907 - Tigger1 DNA MER2_type -85 2333 2220 2 1135 562 325 96 19 chr15 72216069 72216339 -31278635 + B4A SINE B4 2 292 0 2 1135 382 328 0 54 chr15 72216433 72216562 -31278412 - Tigger1 DNA MER2_type -2296 122 1 2 1135 848 279 31 0 chr15 72216686 72216912 -31278062 + Tigger7 DNA MER2_type 179 411 -2080 2 1135 714 247 35 51 chr15 72216901 72217157 -31277817 + Tigger7 DNA MER2_type 2227 2478 -13 2 1135 180 217 0 0 chr15 72217833 72217879 -31277095 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1135 2667 126 51 29 chr15 72218013 72218464 -31276510 - RMER6B LTR ERVK 0 461 1 2 1135 1421 204 29 66 chr15 72218564 72219077 -31275897 + RLTR31_Mm LTR ERVK 1 561 0 3 1135 415 184 26 20 chr15 72219705 72219813 -31275161 - PB1D10 SINE Alu -4 123 6 3 1135 23 54 0 0 chr15 72219983 72220020 -31274954 + AT_rich Low_complexity Low_complexity 1 37 0 3 1135 1197 241 64 44 chr15 72220030 72220307 -31274667 - MTE2b LTR MaLR -12 367 88 3 1135 1101 153 118 5 chr15 72220307 72220510 -31274464 + URR1A DNA MER1_type 1 226 0 3 1135 1197 241 64 44 chr15 72220510 72220592 -31274382 - MTE2b LTR MaLR -292 87 1 3 1136 184 315 74 0 chr15 72222115 72222223 -31272751 + MIRc SINE MIR 58 173 -95 3 1136 951 217 51 19 chr15 72222401 72222617 -31272357 + MTEa LTR MaLR 3 225 -154 3 1136 295 270 0 22 chr15 72222621 72222712 -31272262 - MTE2b LTR MaLR -290 89 1 3 1136 497 354 67 45 chr15 72222917 72223473 -31271501 + ERVL-E-int LTR ERVL 4564 5131 -536 3 1136 567 0 0 0 chr15 72223982 72224045 -31270929 + (TC)n Simple_repeat Simple_repeat 2 64 0 3 1136 249 363 61 35 chr15 72224254 72224485 -31270489 + LTR33A_ LTR ERVL 295 531 0 3 1136 6960 68 25 14 chr15 72224679 72225599 -31269375 + L1Md_F2 LINE L1 5652 6581 -1 3 1136 281 235 46 23 chr15 72225688 72225775 -31269199 + RSINE1 SINE B4 39 127 -38 3 1136 387 126 28 37 chr15 72226130 72226237 -31268737 + GA-rich Low_complexity Low_complexity 1 106 0 3 1136 26 0 0 0 chr15 72226610 72226636 -31268338 + AT_rich Low_complexity Low_complexity 1 26 0 3 1136 305 219 41 10 chr15 72227484 72227581 -31267393 - Lx7 LINE L1 -16 7680 7581 3 1136 549 173 0 0 chr15 72227628 72227752 -31267222 + CT-rich Low_complexity Low_complexity 17 140 0 3 1136 459 0 0 0 chr15 72227752 72227803 -31267171 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1136 549 173 0 0 chr15 72227803 72227817 -31267157 + polypyrimidine Low_complexity Low_complexity 3 16 0 3 1136 186 43 0 0 chr15 72228908 72228931 -31266043 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3 1136 223 246 17 34 chr15 72230633 72230692 -31264282 + ID4 SINE ID 3 60 -23 3 1136 441 0 0 0 chr15 72230713 72230762 -31264212 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 3 1136 1131 295 116 13 chr15 72230771 72231050 -31263924 + L1MB7 LINE L1 3960 4263 -1883 3 1136 5045 110 14 61 chr15 72231050 72231892 -31263082 + RLTR13B4 LTR ERVK 1 803 0 3 1136 1131 295 116 13 chr15 72231892 72232248 -31262726 + L1MB7 LINE L1 4264 4661 -1485 3 1136 363 370 7 43 chr15 72232384 72232525 -31262449 + RSINE1 SINE B4 2 137 -28 3 1136 476 59 15 0 chr15 72232538 72232606 -31262368 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 1136 472 253 93 25 chr15 72233031 72233193 -31261781 + L1MB7 LINE L1 5836 6008 -176 3 1136 395 288 91 30 chr15 72233438 72233657 -31261317 - L1MA7 LINE L1 -263 6037 5804 3 1136 486 0 0 0 chr15 72233665 72233719 -31261255 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1136 261 0 0 0 chr15 72233778 72233807 -31261167 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1136 781 322 48 54 chr15 72233844 72234198 -31260776 + ORR1E LTR MaLR 2 353 -6 3 1136 293 276 10 30 chr15 72234206 72234307 -31260667 - L1MA7 LINE L1 -542 5749 5651 3 1136 301 132 28 28 chr15 72234924 72235033 -31259941 + T-rich Low_complexity Low_complexity 6 114 0 3 1136 369 0 0 0 chr15 72235319 72235360 -31259614 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1136 239 257 56 14 chr15 72235916 72235987 -31258987 + L2a LINE L2 3344 3417 -9 3 1136 421 206 28 18 chr15 72236488 72236597 -31258377 + RMER5 LTR ERV1 69 178 -356 3 1136 606 93 0 0 chr15 72236602 72236688 -31258286 + (GAA)n Simple_repeat Simple_repeat 2 87 0 3 1136 960 79 41 35 chr15 72236693 72236838 -31258136 + B1_Mus1 SINE Alu 2 147 -1 3 1136 486 0 0 0 chr15 72236838 72236892 -31258082 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 1136 210 164 0 0 chr15 72236891 72236946 -31258028 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 3 1136 392 309 22 14 chr15 72236954 72237092 -31257882 + RMER5 LTR ERV1 196 334 -200 3 1136 499 284 23 47 chr15 72237294 72237508 -31257466 + RMER10B LTR ERVL 179 387 -11 3 1136 1017 249 5 0 chr15 72238058 72238271 -31256703 - B3 SINE B2 -2 214 1 3 1136 281 280 84 0 chr15 72239229 72239336 -31255638 - MLT1D LTR MaLR -349 156 41 3 1136 183 167 0 0 chr15 72239808 72239850 -31255124 + CT-rich Low_complexity Low_complexity 3 44 0 3 1136 532 188 20 19 chr15 72241099 72241216 -31253758 - ORR1E LTR MaLR -246 128 1 3 1136 5165 158 13 44 chr15 72241287 72242223 -31252751 - RMER13B LTR ERVK -1 907 1 3 1136 402 21 0 0 chr15 72242368 72242415 -31252559 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1136 330 266 53 76 chr15 72242456 72242627 -31252347 + L1ME3A LINE L1 5954 6120 -53 3 1136 435 328 103 4 chr15 72242665 72242907 -31252067 - LTR16B LTR ERVL -11 452 187 3 1136 419 304 131 0 chr15 72243801 72243969 -31251005 + RMER30 DNA MER1_type 8 197 -5 3 1136 262 254 127 28 chr15 72245162 72245304 -31249670 - MER53 DNA hAT 0 193 38 3 1136 329 214 122 0 chr15 72245189 72245320 -31249654 + MER53 DNA hAT 37 183 -10 3 1136 205 319 0 14 chr15 72245361 72245431 -31249543 - MER5A DNA MER1_type -84 105 37 3 1136 806 264 96 19 chr15 72245612 72245882 -31249092 - B4A SINE B4 0 292 2 3 1136 1466 88 10 0 chr15 72245920 72246113 -31248861 + B2_Mm2 SINE B2 1 195 0 3 1136 271 325 57 0 chr15 72246448 72246571 -31248403 + L2a LINE L2 3226 3355 -71 3 1136 291 85 0 0 chr15 72246904 72246951 -31248023 + (GTTTG)n Simple_repeat Simple_repeat 3 49 0 3 1136 207 162 0 0 chr15 72247066 72247103 -31247871 + CT-rich Low_complexity Low_complexity 3 39 0 3 1136 276 167 0 0 chr15 72247107 72247155 -31247819 - L1MA9 LINE L1 -4 6308 6261 3 1136 1293 118 16 16 chr15 72247913 72248102 -31246872 - B2_Mm2 SINE B2 -5 190 2 3 1136 3042 189 26 39 chr15 72248190 72248803 -31246171 + RLTR1D LTR ERV1 1 605 0 3 1136 455 149 23 0 chr15 72250125 72250212 -31244762 + (CATATA)n Simple_repeat Simple_repeat 6 94 0 3 1136 333 0 0 0 chr15 72250212 72250249 -31244725 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1136 587 217 0 9 chr15 72250491 72250607 -31244367 - MT2A LTR ERVL -68 465 351 3 1136 2005 162 13 24 chr15 72251288 72251668 -31243306 + RLTR14 LTR ERV1 7 382 0 3 1136 2200 214 161 3 chr15 72254176 72254882 -31240092 - RCHARR1 DNA MER1_type -65 909 92 3 1136 24130 81 21 6 chr15 72255383 72259574 -31235400 + L1Md_F2 LINE L1 184 4436 -1447 3 1136 39433 6 0 2 chr15 72259575 72264973 -31230001 + L1Md_A LINE L1 198 5586 -297 3 1136 9215 2 0 0 chr15 72264973 72265969 -31229005 + L1Md_A LINE L1 5587 6582 0 3 1136 9166 60 7 3 chr15 72266000 72267156 -31227818 + L1Md_F2 LINE L1 4427 5586 -297 3 1136 7870 60 4 7 chr15 72267157 72268150 -31226824 + L1Md_F2 LINE L1 5588 6577 -5 3 1136 234 176 0 42 chr15 72268155 72268226 -31226748 + (TAAA)n Simple_repeat Simple_repeat 1 68 0 3 1136 2839 196 12 8 chr15 72269317 72269817 -31225157 + Lx5 LINE L1 6308 6809 -241 3 1136 271 175 15 45 chr15 72270260 72270326 -31224648 - RMER16-int LTR ERVK -3241 2165 2102 3 1136 356 0 0 22 chr15 72270439 72270484 -31224490 + (TTG)n Simple_repeat Simple_repeat 2 45 0 3 1136 216 0 0 0 chr15 72270484 72270507 -31224467 + (CTTG)n Simple_repeat Simple_repeat 4 27 0 3 1136 456 277 76 13 chr15 72271435 72271592 -31223382 - MTE2b LTR MaLR -207 172 6 3 1136 480 307 134 12 chr15 72272958 72273212 -31221762 - RMER15 LTR ERVL -5 570 286 3 1136 299 233 87 10 chr15 72273217 72273321 -31221653 - RMER15 LTR ERVL -416 159 48 3 1136 2404 101 3 0 chr15 72273784 72274110 -31220864 + ORR1A2 LTR MaLR 1 327 0 3 1136 9586 145 118 39 chr15 72274110 72275929 -31219045 + ORR1A2-int LTR MaLR 1 1963 0 3 1136 2466 74 3 24 chr15 72275930 72276263 -31218711 + ORR1A2 LTR MaLR 2 327 0 3 1136 270 194 163 0 chr15 72277142 72277240 -31217734 - Lx7 LINE L1 -18 7678 7565 3 1136 243 0 0 0 chr15 72277245 72277272 -31217702 + (TAA)n Simple_repeat Simple_repeat 3 29 0 3 1136 1418 241 66 35 chr15 72277275 72277364 -31217610 - Lx7 LINE L1 -193 7503 7419 3 1136 1280 72 54 27 chr15 72277364 72277550 -31217424 + B2_Mm2 SINE B2 2 192 -3 3 1136 1436 241 66 35 chr15 72277550 72277882 -31217092 - Lx7 LINE L1 -278 7418 7070 3 1136 390 42 0 0 chr15 72277882 72277930 -31217044 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1136 1128 200 176 53 chr15 72277930 72278252 -31216722 - MTC LTR MaLR -3 418 49 3 1136 603 311 71 5 chr15 72278261 72278445 -31216529 + B4A SINE B4 83 278 -14 3 1136 2090 136 9 31 chr15 72280098 72280448 -31214526 - L1_Mm LINE L1 -324 5559 5218 3 1136 4501 110 28 8 chr15 72280452 72281122 -31213852 - RMER12 LTR ERVK -638 684 1 3 1136 1176 15 0 0 chr15 72281245 72281375 -31213599 - L1Md_F3 LINE L1 -177 6407 6278 3 1136 1333 94 0 6 chr15 72281375 72281635 -31213339 + L1Md_F3 LINE L1 6391 6584 0 3 1136 313 316 60 0 chr15 72282409 72282526 -31212448 - L1MB7 LINE L1 -228 5956 5833 3 1136 485 309 121 77 chr15 72283141 72283481 -31211493 - ORR1E LTR MaLR -4 355 1 3 1136 234 0 0 0 chr15 72283795 72283821 -31211153 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1136 1204 164 0 5 chr15 72284840 72285049 -31209925 + Lx6 LINE L1 5090 5297 -583 3 1136 7317 195 36 71 chr15 72285044 72286944 -31208030 + Lx6 LINE L1 5458 7274 -186 3 1136 1598 58 21 0 chr15 72286944 72287135 -31207839 - B2_Mm2 SINE B2 0 195 1 3 1136 7317 204 39 90 chr15 72287135 72287147 -31207827 + Lx6 LINE L1 7275 7283 -177 3 1136 290 320 30 0 chr15 72287216 72287316 -31207658 + Lx7 LINE L1 7205 7307 -389 3 1136 3928 197 16 87 chr15 72288156 72289253 -31205721 - RMER12 LTR ERVK -160 1412 1 3 1136 923 238 19 19 chr15 72289485 72289695 -31205279 - B3 SINE B2 -4 212 3 3 1136 792 258 153 42 chr15 72290012 72290438 -31204536 - Lx7 LINE L1 -12 7684 7066 3 1136 339 25 0 0 chr15 72290453 72290493 -31204481 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1136 833 278 166 35 chr15 72290526 72290869 -31204105 - Lx7 LINE L1 -951 6745 6358 3 1136 7889 53 14 5 chr15 72291003 72292062 -31202912 - L1Md_F2 LINE L1 -3 6579 5511 3 1136 23 0 0 0 chr15 72292069 72292092 -31202882 + AT_rich Low_complexity Low_complexity 1 23 0 3 1136 207 0 0 0 chr15 72292256 72292279 -31202695 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1136 247 350 41 0 chr15 72292306 72292403 -31202571 - Lx7 LINE L1 -402 7294 7194 3 1136 6841 164 28 28 chr15 72292519 72293824 -31201150 - L1_Mur3 LINE L1 -255 5625 4321 3 1136 2769 167 102 3 chr15 72293814 72294091 -31200883 - L1_Mur3 LINE L1 -2093 3787 3484 3 1136 198 0 0 0 chr15 72294091 72294113 -31200861 + (TTG)n Simple_repeat Simple_repeat 3 24 0 3 1136 2769 167 102 3 chr15 72294113 72294251 -31200723 - L1_Mur3 LINE L1 -2397 3483 3323 3 1136 5917 93 4 29 chr15 72294251 72295070 -31199904 + L1Md_F2 LINE L1 5785 6582 0 3 1136 2769 167 102 3 chr15 72295070 72295219 -31199755 - L1_Mur3 LINE L1 -2558 3322 3169 3 1136 1770 204 44 11 chr15 72295225 72295587 -31199387 - ORR1C1 LTR MaLR 0 378 5 3 1136 2488 143 44 52 chr15 72295588 72296088 -31198886 - L1_Mur3 LINE L1 -2716 3164 2669 3 1136 5480 139 31 23 chr15 72296086 72296514 -31198460 - L1_Mur3 LINE L1 -4271 1609 1180 3 1136 1286 54 0 0 chr15 72296514 72296661 -31198313 - B1_Mus1 SINE Alu 0 148 2 3 1136 5480 212 50 33 chr15 72296661 72297800 -31197174 - L1_Mur3 LINE L1 -6549 1179 17 3 1136 1211 257 131 0 chr15 72297816 72298151 -31196823 - MTEa LTR MaLR 0 379 1 4 1136 1925 164 126 0 chr15 72298168 72298533 -31196441 - MTD LTR MaLR -8 411 1 4 1136 859 282 138 61 chr15 72298805 72299584 -31195390 - L1MC2 LINE L1 -282 6062 5231 4 1136 2230 167 16 14 chr15 72299584 72299949 -31195025 - ORR1B2 LTR MaLR -1 366 1 4 1136 490 286 76 42 chr15 72299949 72300320 -31194654 - L1MC2 LINE L1 -916 5230 4750 4 1136 782 248 25 90 chr15 72300355 72300599 -31194375 - MTE2a LTR MaLR -4 375 148 4 1136 773 275 126 32 chr15 72300659 72300944 -31194030 - ORR1E LTR MaLR -4 355 44 4 1136 590 266 15 15 chr15 72301435 72301565 -31193409 + ID_B1 SINE B4 86 215 -9 4 1136 2222 92 42 62 chr15 72301773 72302109 -31192865 + ORR1A4 LTR MaLR 1 329 0 4 1136 225 416 0 56 chr15 72302668 72302775 -31192199 + LTR33B LTR ERVL 55 155 -348 4 1136 261 358 16 39 chr15 72302974 72303102 -31191872 + LTR33B LTR ERVL 357 481 -22 4 1136 417 152 0 0 chr15 72303941 72303996 -31190978 + polypurine Low_complexity Low_complexity 3 57 0 4 1136 1389 61 0 0 chr15 72303996 72304176 -31190798 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 4 1136 417 152 0 0 chr15 72304176 72304199 -31190775 + polypurine Low_complexity Low_complexity 58 80 0 4 1136 379 393 86 45 chr15 72304274 72304543 -31190431 + LTR16C LTR ERVL 81 360 -129 4 1136 272 284 116 27 chr15 72304811 72304923 -31190051 + MER20 DNA MER1_type 42 163 -56 4 1136 1158 75 0 33 chr15 72305043 72305195 -31189779 + B1_Mus1 SINE Alu 2 148 0 4 1136 452 291 27 0 chr15 72305202 72305312 -31189662 - L1M2 LINE L1 -1203 4940 4828 4 1136 524 247 173 30 chr15 72305313 72305433 -31189541 + L1MA5 LINE L1 5560 5705 -484 4 1136 1167 159 327 63 chr15 72305433 72305611 -31189363 + RMER10B LTR ERVL 1 258 -140 4 1136 898 109 7 7 chr15 72305611 72305758 -31189216 + (TCTCC)n Simple_repeat Simple_repeat 1 147 0 4 1136 1167 159 327 63 chr15 72305758 72305894 -31189080 + RMER10B LTR ERVL 259 397 -1 4 1136 699 236 96 0 chr15 72305894 72306094 -31188880 + L1MA5 LINE L1 5706 5923 -377 4 1136 907 168 190 52 chr15 72306605 72306836 -31188138 - RLTR23 LTR ERV1 0 430 168 4 1136 808 205 222 5 chr15 72306817 72307033 -31187941 - RLTR23 LTR ERV1 -158 272 10 4 1136 263 349 97 71 chr15 72307098 72307490 -31187484 - LTR33B LTR ERVL -21 482 81 4 1136 261 298 119 34 chr15 72307933 72308051 -31186923 + B1F SINE Alu 14 141 -8 4 1136 737 271 17 22 chr15 72307945 72308126 -31186848 + B4 SINE B4 113 292 0 4 1136 231 328 0 0 chr15 72308210 72308268 -31186706 + ID4 SINE ID 24 81 -2 4 1136 226 62 0 0 chr15 72308766 72308798 -31186176 + MTA_Mm LTR MaLR 1 32 -364 4 1136 876 110 58 9 chr15 72308815 72309045 -31185929 - MT2C_Mm LTR ERVL 0 475 290 4 1136 3072 42 3 3 chr15 72309055 72309433 -31185541 + MTA_Mm LTR MaLR 19 396 0 4 1136 9554 39 13 1 chr15 72309433 72310518 -31184456 + MTA_Mm-int LTR MaLR 1 1098 0 4 1136 3257 29 56 3 chr15 72310518 72310894 -31184080 + MTA_Mm LTR MaLR 1 396 0 4 1136 799 287 29 5 chr15 72310901 72311111 -31183863 - B4 SINE B4 -69 223 9 4 1136 1305 111 22 0 chr15 72311159 72311340 -31183634 - B2_Mm1t SINE B2 -7 186 2 4 1136 239 255 57 75 chr15 72311340 72311446 -31183528 - Charlie8 DNA MER1_type -101 2327 2224 4 1136 399 100 0 0 chr15 72311535 72311605 -31183369 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 4 1136 480 321 22 0 chr15 72311631 72311768 -31183206 - B1F1 SINE Alu -7 142 3 4 1136 989 313 68 12 chr15 72311820 72312247 -31182727 - Charlie8 DNA MER1_type -414 2014 1564 4 1136 666 94 21 0 chr15 72312278 72312374 -31182600 + B2_Mm2 SINE B2 2 99 -96 4 1136 459 0 0 0 chr15 72312414 72312465 -31182509 + (TAGA)n Simple_repeat Simple_repeat 1 51 0 4 1136 588 14 0 0 chr15 72312465 72312534 -31182440 + (GGAA)n Simple_repeat Simple_repeat 1 69 0 4 1136 344 282 174 8 chr15 72312746 72312878 -31182096 - MTEa LTR MaLR -60 319 166 4 1136 683 227 15 80 chr15 72313044 72313537 -31181437 - RMER17C LTR ERVK -51 359 1 4 1136 758 140 0 0 chr15 72313551 72313665 -31181309 + RMER17C-int LTR ERVK 2652 2765 -473 4 1136 746 132 19 106 chr15 72313663 72313824 -31181150 + RMER17C-int LTR ERVK 2209 2355 -883 4 1136 5200 151 85 42 chr15 72313820 72314824 -31180150 - RMER17C-int LTR ERVK -1029 2209 1163 4 1136 581 165 16 141 chr15 72315302 72315486 -31179488 - RMER17C-int LTR ERVK -2606 632 472 4 1136 276 195 22 154 chr15 72315523 72315614 -31179360 - RMER17C-int LTR ERVK -3159 79 1 4 1136 901 211 25 70 chr15 72315615 72315859 -31179115 - RMER17C LTR ERVK 0 410 178 4 1136 2486 134 103 3 chr15 72315935 72316315 -31178659 - MTC LTR MaLR -3 418 1 4 1136 323 312 76 23 chr15 72317041 72317172 -31177802 - RMER5 LTR ERV1 -348 186 49 4 1136 252 0 0 0 chr15 72317585 72317613 -31177361 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1136 209 200 0 0 chr15 72318201 72318236 -31176738 + (CATA)n Simple_repeat Simple_repeat 2 36 0 4 1136 373 282 169 8 chr15 72318690 72318808 -31176166 - B1_Mur2 SINE Alu -11 138 2 4 1136 948 243 9 14 chr15 72318923 72319136 -31175838 + B3 SINE B2 3 214 -2 4 1136 278 291 19 0 chr15 72319136 72319239 -31175735 + (TA)n Simple_repeat Simple_repeat 2 106 0 4 1136 3225 62 23 8 chr15 72319291 72319681 -31175293 + MTA_Mm LTR MaLR 1 396 0 4 1136 324 0 0 0 chr15 72320427 72320463 -31174511 + (A)n Simple_repeat Simple_repeat 1 36 0 4 1136 345 75 0 0 chr15 72320811 72320864 -31174110 + (GA)n Simple_repeat Simple_repeat 1 53 0 4 1136 681 244 117 45 chr15 72321093 72321316 -31173658 - RLTR25B LTR ERVK 0 1028 790 4 1136 254 241 19 0 chr15 72321389 72321443 -31173531 - U7 snRNA snRNA -2 61 7 4 1136 1631 178 84 9 chr15 72321425 72321759 -31173215 - RLTR25B LTR ERVK -220 808 450 4 1136 378 337 62 28 chr15 72321796 72321973 -31173001 - MTC LTR MaLR -221 200 18 4 1136 269 283 107 14 chr15 72322150 72322290 -31172684 + L1MB8 LINE L1 4299 4451 -1695 4 1136 288 0 0 0 chr15 72322425 72322457 -31172517 + (ATTG)n Simple_repeat Simple_repeat 2 33 0 4 1136 1174 88 13 0 chr15 72322457 72322616 -31172358 - B2_Mm2 SINE B2 -34 161 1 4 1136 290 85 0 33 chr15 72322837 72322898 -31172076 - B2_Mm2 SINE B2 0 195 137 4 1136 1259 114 17 0 chr15 72322968 72323143 -31171831 - B2_Mm1t SINE B2 -14 179 2 4 1136 318 218 240 28 chr15 72323155 72323334 -31171640 + L1MA9 LINE L1 6091 6307 -5 4 1136 352 286 75 61 chr15 72324091 72324363 -31170611 + L1MB8 LINE L1 5188 5464 -710 4 1136 590 311 118 50 chr15 72324380 72324697 -31170277 + L1MB8 LINE L1 5540 5872 -306 4 1136 1016 234 14 28 chr15 72324697 72324912 -31170062 + B3 SINE B2 5 216 0 4 1136 590 302 128 54 chr15 72324912 72325193 -31169781 + L1MB8 LINE L1 5873 6177 -1 4 1136 24 0 0 0 chr15 72325302 72325326 -31169648 + AT_rich Low_complexity Low_complexity 1 24 0 4 1136 503 289 25 0 chr15 72325429 72325550 -31169424 - ID_B1 SINE B4 -19 205 82 4 1136 237 65 0 0 chr15 72325768 72325799 -31169175 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1136 901 181 0 14 chr15 72325799 72325939 -31169035 - B1_Mus1 SINE Alu -9 139 2 4 1136 243 0 0 0 chr15 72325954 72325981 -31168993 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1136 1089 59 81 7 chr15 72325984 72326120 -31168854 - B1_Mm SINE Alu 0 147 2 4 1136 325 194 0 0 chr15 72326207 72326269 -31168705 - L1_Rod LINE L1 -6824 348 287 4 1136 367 296 142 101 chr15 72326453 72326720 -31168254 - B4A SINE B4 -10 282 5 4 1136 300 53 0 0 chr15 72326786 72326824 -31168150 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1136 679 251 102 0 chr15 72326827 72326994 -31167980 - B3A SINE B2 -14 184 1 4 1136 1091 110 14 0 chr15 72327366 72327512 -31167462 - B1_Mus1 SINE Alu 0 148 1 4 1136 318 224 81 23 chr15 72327625 72327712 -31167262 + MTEb LTR MaLR 278 369 -10 4 1136 760 180 0 0 chr15 72327954 72328076 -31166898 - B1_Mus1 SINE Alu -26 122 1 4 1136 1229 75 0 0 chr15 72328181 72328328 -31166646 - B1_Mus2 SINE Alu 0 147 1 4 1136 367 342 51 13 chr15 72328659 72328816 -31166158 + RLTR40 LTR ERVK 642 804 -13 4 1136 402 21 0 0 chr15 72329382 72329429 -31165545 + (TAA)n Simple_repeat Simple_repeat 2 48 0 4 1136 292 236 18 0 chr15 72330069 72330124 -31164850 + B4A SINE B4 1 56 -236 4 1136 384 297 144 45 chr15 72330510 72330711 -31164263 - MLT1I LTR MaLR -139 272 52 4 1136 441 36 0 0 chr15 72331071 72331126 -31163848 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1136 25 0 0 0 chr15 72332317 72332342 -31162632 + AT_rich Low_complexity Low_complexity 1 25 0 4 1136 183 100 0 0 chr15 72332434 72332464 -31162510 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1136 324 200 0 0 chr15 72333118 72333223 -31161751 + CT-rich Low_complexity Low_complexity 2 106 0 4 1136 246 32 0 0 chr15 72333244 72333275 -31161699 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1136 407 323 57 44 chr15 72337482 72337882 -31157092 + L1MC4 LINE L1 7408 7838 -204 4 1136 243 202 104 139 chr15 72338998 72339113 -31155861 - MLT2B4 LTR ERVL -173 383 273 4 1136 215 351 52 21 chr15 72339610 72339706 -31155268 + MIR3 SINE MIR 87 185 -23 4 1136 186 235 0 0 chr15 72342717 72342798 -31152176 + (CAG)n Simple_repeat Simple_repeat 3 83 0 4 1136 231 36 0 0 chr15 72342808 72342836 -31152138 + (CAT)n Simple_repeat Simple_repeat 1 28 0 4 1136 447 19 0 0 chr15 72343739 72343791 -31151183 + (TTTTG)n Simple_repeat Simple_repeat 5 56 0 4 1136 466 272 35 17 chr15 72343793 72343909 -31151065 - ID_B1 SINE B4 -16 208 91 4 1136 217 185 34 85 chr15 72344579 72344638 -31150336 + L2a LINE L2 3327 3382 -44 4 1136 393 290 73 40 chr15 72345384 72345686 -31149288 + L1MEf LINE L1 1149 1460 -4740 4 1136 607 208 34 20 chr15 72346314 72346461 -31148513 - B1F SINE Alu 0 149 1 4 1136 183 333 26 26 chr15 72347878 72347955 -31147019 - MIR SINE MIR 0 262 186 4 1136 227 283 88 29 chr15 72349555 72349657 -31145317 - RLTR22_Mur LTR ERVK -153 1695 1588 4 1136 642 292 68 73 chr15 72349959 72351221 -31143753 + L1M4c LINE L1 1280 2523 -3859 4 1136 207 0 0 0 chr15 72351263 72351286 -31143688 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1137 780 294 131 14 chr15 72352058 72352576 -31142398 + L1MB5 LINE L1 5593 6171 -3 4 1137 318 267 33 11 chr15 72352802 72352893 -31142081 - MER47B DNA MER2_type 0 418 326 4 1137 240 355 83 13 chr15 72353063 72353220 -31141754 - MER47B DNA MER2_type -151 267 100 4 1137 272 337 69 25 chr15 72353291 72353525 -31141449 - MER47B DNA MER2_type -138 280 100 4 1137 233 339 50 34 chr15 72353495 72353614 -31141360 - MER47B DNA MER2_type -182 236 116 4 1137 235 340 96 19 chr15 72353776 72353932 -31141042 - MER47B DNA MER2_type -151 267 100 4 1137 276 327 80 28 chr15 72353980 72354543 -31140431 - MER47B DNA MER2_type -138 280 100 4 1137 261 352 68 30 chr15 72354513 72354645 -31140329 - MER47B DNA MER2_type -182 236 100 4 1137 401 376 39 19 chr15 72354615 72354821 -31140153 - MER47B DNA MER2_type -182 236 27 4 1137 203 227 15 0 chr15 72357061 72357127 -31137847 + (TAGA)n Simple_repeat Simple_repeat 3 69 0 4 1137 199 236 28 0 chr15 72357219 72357291 -31137683 + (TGAA)n Simple_repeat Simple_repeat 4 77 0 5 1137 297 312 44 0 chr15 72357363 72357523 -31137451 + (TGGA)n Simple_repeat Simple_repeat 4 170 0 5 1137 258 283 0 0 chr15 72358445 72358505 -31136469 + MIRc SINE MIR 88 147 -121 5 1137 188 245 20 0 chr15 72359283 72359332 -31135642 + L2 LINE L2 99 148 -3271 5 1137 305 260 27 0 chr15 72359729 72359802 -31135172 + MLT1A0 LTR MaLR 244 318 -47 5 1137 252 303 56 0 chr15 72360538 72360627 -31134347 - MIRb SINE MIR -49 219 126 5 1137 270 247 53 21 chr15 72361335 72361430 -31133544 - L2b LINE L2 -5 3370 3273 5 1137 226 197 45 0 chr15 72361984 72362050 -31132924 + GA-rich Low_complexity Low_complexity 4 72 0 5 1137 342 310 123 14 chr15 72364087 72364253 -31130721 - MIR SINE MIR -67 201 7 5 1137 24 67 0 0 chr15 72364335 72364380 -31130594 + AT_rich Low_complexity Low_complexity 1 45 0 5 1137 1039 139 0 0 chr15 72366257 72366401 -31128573 + B1_Mur4 SINE Alu 1 144 -6 5 1137 191 185 15 0 chr15 72369795 72369840 -31125134 + MIR SINE MIR 106 152 -124 5 1137 561 219 6 0 chr15 72370125 72370298 -31124676 + (TG)n Simple_repeat Simple_repeat 1 174 0 5 1137 217 252 0 19 chr15 72370311 72370416 -31124558 + (TG)n Simple_repeat Simple_repeat 2 104 0 5 1137 282 322 4 24 chr15 72370437 72370691 -31124283 + (TG)n Simple_repeat Simple_repeat 1 248 0 5 1137 379 301 8 0 chr15 72370729 72370852 -31124122 + (TG)n Simple_repeat Simple_repeat 1 124 0 5 1137 226 229 10 10 chr15 72370890 72370987 -31123987 + (TG)n Simple_repeat Simple_repeat 2 98 0 5 1137 374 353 11 6 chr15 72371012 72371186 -31123788 + (TG)n Simple_repeat Simple_repeat 1 175 0 5 1137 350 204 0 11 chr15 72371300 72371394 -31123580 + (TG)n Simple_repeat Simple_repeat 2 94 0 5 1137 240 323 12 31 chr15 72371404 72371567 -31123407 + (TATG)n Simple_repeat Simple_repeat 3 162 0 5 1137 430 228 0 12 chr15 72371659 72371819 -31123155 + (TG)n Simple_repeat Simple_repeat 1 158 0 5 1137 324 323 16 8 chr15 72371834 72371959 -31123015 + (TATG)n Simple_repeat Simple_repeat 3 128 0 5 1137 450 0 0 0 chr15 72371983 72372033 -31122941 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1137 219 279 96 52 chr15 72373470 72373606 -31121368 - MIRb SINE MIR -4 264 123 5 1137 285 191 0 0 chr15 72373692 72373739 -31121235 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1137 462 189 7 27 chr15 72373743 72373890 -31121084 + (TATG)n Simple_repeat Simple_repeat 1 144 0 5 1137 366 287 87 73 chr15 72373912 72374130 -31120844 + RMER12 LTR ERVK 768 988 -334 5 1137 421 263 32 53 chr15 72374220 72374409 -31120565 + RMER12 LTR ERVK 770 954 -368 5 1137 22 35 0 0 chr15 72375295 72375324 -31119650 + AT_rich Low_complexity Low_complexity 1 29 0 5 1137 225 154 0 0 chr15 72378244 72378283 -31116691 + CT-rich Low_complexity Low_complexity 2 40 0 5 1137 360 0 0 0 chr15 72378740 72378780 -31116194 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1137 22 35 0 0 chr15 72379114 72379143 -31115831 + GC_rich Low_complexity Low_complexity 1 29 0 5 1137 399 21 0 0 chr15 72380475 72380523 -31114451 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1137 494 103 0 13 chr15 72381187 72381266 -31113708 + (GGGA)n Simple_repeat Simple_repeat 3 80 0 5 1137 1743 237 31 8 chr15 72381539 72381896 -31113078 + MTE2b LTR MaLR 4 368 -11 5 1137 306 0 0 0 chr15 72382174 72382208 -31112766 + (TC)n Simple_repeat Simple_repeat 1 34 0 5 1137 408 20 0 0 chr15 72382208 72382256 -31112718 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1137 948 70 0 0 chr15 72382898 72383027 -31111947 + (TTC)n Simple_repeat Simple_repeat 3 131 0 5 1137 415 303 58 36 chr15 72384287 72384424 -31110550 + RSINE1 SINE B4 3 142 -23 5 1137 423 38 0 0 chr15 72384425 72384478 -31110496 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1137 30 0 0 0 chr15 72384478 72384508 -31110466 + AT_rich Low_complexity Low_complexity 1 30 0 5 1137 1702 259 66 35 chr15 72384508 72385020 -31109954 + Lx6 LINE L1 6932 7459 -1 5 1137 936 258 5 5 chr15 72385043 72385246 -31109728 + ID_B1 SINE B4 16 218 -6 5 1137 1141 307 53 17 chr15 72385328 72385745 -31109229 + Lx7 LINE L1 6886 7317 -379 5 1137 244 157 31 73 chr15 72385762 72385858 -31109116 + (TTAA)n Simple_repeat Simple_repeat 1 92 0 5 1137 3635 145 118 14 chr15 72385950 72386031 -31108943 + Lx7 LINE L1 551 631 -7097 5 1137 671 0 119 0 chr15 72386031 72386190 -31108784 + (TAG)n Simple_repeat Simple_repeat 3 180 0 5 1137 7388 139 69 18 chr15 72386190 72387549 -31107425 + Lx7 LINE L1 632 2068 -3812 5 1137 261 0 0 0 chr15 72387549 72387578 -31107396 + (CCA)n Simple_repeat Simple_repeat 1 29 0 5 1137 7388 135 39 21 chr15 72387578 72387805 -31107169 + Lx7 LINE L1 2069 2305 -3575 5 1137 276 53 0 0 chr15 72387805 72387843 -31107131 + (TTA)n Simple_repeat Simple_repeat 1 38 0 5 1137 7469 130 34 11 chr15 72387843 72389010 -31105964 - Lx4A LINE L1 -15 7043 5850 5 1137 4181 152 41 27 chr15 72389010 72389422 -31105552 + Lx7 LINE L1 2306 2721 -3159 5 1137 1222 154 5 0 chr15 72389426 72389634 -31105340 - L1_Mur3 LINE L1 -1034 4846 4638 5 1137 3894 191 47 27 chr15 72389635 72390948 -31104026 + Lx7 LINE L1 5073 6426 -1270 5 1137 1329 102 5 5 chr15 72390948 72391154 -31103820 + RMER6A LTR ERVK 2 207 -549 5 1137 272 194 0 16 chr15 72391155 72391218 -31103756 + Lx7 LINE L1 7376 7437 -23 5 1137 875 10 0 9 chr15 72391223 72391328 -31103646 + (GAA)n Simple_repeat Simple_repeat 2 105 0 5 1137 706 202 316 18 chr15 72391897 72392179 -31102795 + MTD LTR MaLR 13 378 -41 5 1137 707 99 18 9 chr15 72392218 72392330 -31102644 - B1_Mur4 SINE Alu 0 150 38 5 1137 423 0 0 0 chr15 72392368 72392415 -31102559 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1137 10411 71 29 4 chr15 72392431 72394464 -31100510 - L1Md_F2 LINE L1 -11 6571 4511 5 1137 187 114 29 0 chr15 72394702 72394737 -31100237 + L2c LINE L2 3133 3168 -219 5 1137 1128 231 66 16 chr15 72394911 72395214 -31099760 + RMER19A LTR ERVK 221 538 -199 5 1137 1124 259 38 15 chr15 72395208 72395474 -31099500 + B4 SINE B4 19 290 -2 5 1137 24 0 0 0 chr15 72395618 72395642 -31099332 + AT_rich Low_complexity Low_complexity 1 24 0 5 1137 365 264 27 9 chr15 72395690 72395801 -31099173 + PB1D9 SINE Alu 2 114 -6 5 1137 225 121 28 83 chr15 72395894 72395966 -31099008 + A-rich Low_complexity Low_complexity 1 68 0 5 1137 462 306 7 40 chr15 72396001 72396151 -31098823 + ID_B1 SINE B4 76 220 -4 5 1137 213 154 74 37 chr15 72396103 72396157 -31098817 + PB1D10 SINE Alu 62 117 0 5 1137 704 203 0 15 chr15 72397070 72397205 -31097769 + B1_Mur2 SINE Alu 17 149 0 5 1137 233 289 131 7 chr15 72397644 72397797 -31097177 + L1M5 LINE L1 3621 3792 -2354 5 1137 518 212 20 0 chr15 72397867 72397966 -31097008 - B1_Mur1 SINE Alu -7 142 42 5 1137 411 278 0 0 chr15 72397968 72398083 -31096891 + CT-rich Low_complexity Low_complexity 2 116 0 5 1137 294 106 0 41 chr15 72398087 72398136 -31096838 - B1_Mus2 SINE Alu -88 59 13 5 1137 1204 161 32 5 chr15 72398838 72399057 -31095917 + URR1B DNA MER1_type 1 225 0 5 1137 2255 138 74 0 chr15 72399671 72400034 -31094940 - ORR1B1 LTR MaLR -4 390 1 5 1137 1143 235 78 42 chr15 72400200 72400559 -31094415 - MTE2b LTR MaLR -2 377 6 5 1137 231 281 35 35 chr15 72401060 72401145 -31093829 + MLT1A1 LTR MaLR 312 396 -12 5 1137 889 307 45 8 chr15 72402054 72402320 -31092654 - B4A SINE B4 -6 286 11 5 1137 577 306 80 41 chr15 72402357 72402621 -31092353 - L1M5 LINE L1 -1452 4694 4412 5 1137 967 284 110 66 chr15 72402621 72403103 -31091871 - MLT1D LTR MaLR 0 505 3 5 1137 577 306 80 41 chr15 72403103 72403227 -31091747 - L1M5 LINE L1 -1735 4411 4291 5 1137 729 252 13 0 chr15 72403417 72403572 -31091402 + B3A SINE B2 1 157 -41 5 1137 366 23 0 0 chr15 72403580 72403623 -31091351 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 1137 180 0 0 0 chr15 72403692 72403712 -31091262 + (TTTG)n Simple_repeat Simple_repeat 4 23 0 5 1137 365 224 13 26 chr15 72403713 72403791 -31091183 - ID4_ SINE ID -4 79 3 5 1137 474 250 22 14 chr15 72403808 72403946 -31091028 - B1F SINE Alu -8 141 3 5 1137 321 327 83 22 chr15 72404051 72404329 -31090645 - L1M5 LINE L1 -2197 3949 3655 5 1137 515 314 56 21 chr15 72404437 72404724 -31090250 + B4 SINE B4 8 291 -1 5 1137 181 210 16 16 chr15 72404728 72404791 -31090183 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 1137 541 159 43 6 chr15 72404817 72404981 -31089993 + (CA)n Simple_repeat Simple_repeat 2 171 0 5 1137 295 196 40 13 chr15 72404992 72405142 -31089832 + (CA)n Simple_repeat Simple_repeat 1 154 0 5 1137 399 21 0 0 chr15 72405212 72405260 -31089714 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1137 387 0 0 0 chr15 72405294 72405337 -31089637 + (GTTTG)n Simple_repeat Simple_repeat 2 44 0 5 1137 238 288 173 59 chr15 72405430 72405973 -31089001 - L1M5 LINE L1 -2735 3411 2807 5 1137 663 207 116 26 chr15 72405992 72406181 -31088793 + MTD LTR MaLR 1 206 -213 5 1137 417 171 132 1 chr15 72406203 72406315 -31088659 + MTD LTR MaLR 256 405 -14 5 1137 22 0 0 0 chr15 72406442 72406464 -31088510 + AT_rich Low_complexity Low_complexity 1 22 0 5 1137 324 0 0 0 chr15 72406479 72406515 -31088459 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1137 587 310 120 27 chr15 72407250 72407509 -31087465 - B4 SINE B4 -2 290 8 5 1137 22 0 0 0 chr15 72407545 72407567 -31087407 + AT_rich Low_complexity Low_complexity 1 22 0 5 1137 495 276 127 7 chr15 72407575 72407717 -31087257 - RSINE1 SINE B4 -3 162 4 5 1137 23 33 0 0 chr15 72407717 72407747 -31087227 + AT_rich Low_complexity Low_complexity 1 30 0 5 1137 24 67 0 0 chr15 72407837 72407882 -31087092 + AT_rich Low_complexity Low_complexity 1 45 0 5 1137 222 37 0 0 chr15 72407984 72408011 -31086963 + (CAA)n Simple_repeat Simple_repeat 2 28 0 5 1137 565 291 28 42 chr15 72408020 72408235 -31086739 - Lx7 LINE L1 -335 7361 7150 5 1137 1563 233 80 14 chr15 72408237 72408598 -31086376 - Lx7 LINE L1 -694 7002 6618 5 1137 624 141 89 38 chr15 72408599 72408748 -31086226 + ORR1B1 LTR MaLR 1 156 -238 5 1137 727 209 8 0 chr15 72408748 72408882 -31086092 - Lx5 LINE L1 -150 6900 6766 5 1137 319 148 222 0 chr15 72409064 72409145 -31085829 - Lx9 LINE L1 -8 7636 7538 5 1137 3025 223 48 5 chr15 72409148 72409792 -31085182 + Lx7 LINE L1 6719 7390 -306 5 1137 1440 163 0 67 chr15 72409785 72409924 -31085050 - Lx9 LINE L1 -567 7077 6946 5 1137 3366 67 0 2 chr15 72409924 72410399 -31084575 - L1_Mus1 LINE L1 0 6567 6140 5 1137 1440 163 0 67 chr15 72410399 72410528 -31084446 - Lx9 LINE L1 -699 6945 6827 5 1137 5389 195 62 55 chr15 72410536 72412013 -31082961 - L1_Rod LINE L1 -697 5150 3664 5 1137 758 174 23 0 chr15 72412049 72412221 -31082753 + CT-rich Low_complexity Low_complexity 1 176 0 5 1137 243 140 0 0 chr15 72412249 72412299 -31082675 + (T)n Simple_repeat Simple_repeat 1 50 0 5 1137 6836 190 51 51 chr15 72412313 72413717 -31081257 - L1_Rod LINE L1 -2189 3658 2240 5 1137 795 66 44 0 chr15 72413717 72413853 -31081121 + (TC)n Simple_repeat Simple_repeat 2 143 0 5 1137 1156 75 0 7 chr15 72413863 72414011 -31080963 - B1_Mus1 SINE Alu -1 147 1 6 1137 6836 190 51 51 chr15 72414011 72414393 -31080581 - L1_Rod LINE L1 -3608 2239 1860 5 1137 968 244 112 13 chr15 72414709 72415012 -31079962 - L1_Rod LINE L1 -6824 348 16 6 1137 600 301 11 28 chr15 72415093 72415271 -31079703 - L1_Rod LINE L1 -6931 241 67 6 1137 889 176 132 29 chr15 72415606 72415811 -31079163 + URR1A DNA MER1_type 1 226 0 6 1137 311 313 35 0 chr15 72416046 72416161 -31078813 - L1MEg LINE L1 -4748 1477 1359 6 1137 233 312 12 0 chr15 72416349 72416429 -31078545 - L1MEg LINE L1 -5075 1044 964 6 1137 272 252 81 88 chr15 72417100 72417248 -31077726 - B4 SINE B4 -144 148 2 6 1137 375 162 0 79 chr15 72417468 72417595 -31077379 - RMER17C LTR ERVK -136 274 158 6 1137 219 365 60 20 chr15 72418072 72418223 -31076751 - MIRm SINE MIR -98 178 22 6 1137 199 323 115 31 chr15 72425054 72425150 -31069824 + L4 LINE RTE 1745 1848 -181 6 1137 754 240 103 0 chr15 72426131 72426306 -31068668 - ID_B1 SINE B4 -11 213 21 6 1137 5268 224 124 31 chr15 72426626 72428018 -31066956 + Lx9 LINE L1 838 2431 -3416 6 1137 1719 163 98 9 chr15 72428018 72428365 -31066609 + ORR1C1 LTR MaLR 1 378 0 6 1137 5268 233 132 27 chr15 72428365 72429149 -31065825 + Lx9 LINE L1 2432 3280 -2567 6 1137 662 255 40 36 chr15 72429155 72429379 -31065595 + L1M2 LINE L1 3606 3830 -2313 6 1137 2342 224 136 15 chr15 72429381 72430402 -31064572 + Lx9 LINE L1 4847 6052 -1592 6 1137 3267 236 108 30 chr15 72430397 72431368 -31063606 + Lx9 LINE L1 6572 7618 -26 6 1137 54 56 0 0 chr15 72431375 72431464 -31063510 + AT_rich Low_complexity Low_complexity 1 89 0 6 1137 251 299 114 11 chr15 72433117 72433205 -31061769 - B1F2 SINE Alu -51 98 2 6 1137 450 156 28 44 chr15 72433208 72433389 -31061585 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 6 1137 277 250 57 40 chr15 72433392 72433567 -31061407 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 6 1137 383 250 52 19 chr15 72433503 72433658 -31061316 + (TCCA)n Simple_repeat Simple_repeat 3 162 0 6 1137 518 269 28 0 chr15 72433775 72433916 -31061058 + MLT1C LTR MaLR 313 457 -10 6 1137 378 224 122 97 chr15 72436640 72436841 -31058133 + B4A SINE B4 39 240 -52 6 1137 322 146 18 0 chr15 72436922 72436977 -31057997 + HAL1-3A_ME LINE L1 1975 2030 -828 6 1137 289 238 74 12 chr15 72437022 72437103 -31057871 + MLT1B LTR MaLR 133 218 -172 6 1137 26 0 0 0 chr15 72437409 72437435 -31057539 + AT_rich Low_complexity Low_complexity 1 26 0 6 1137 450 0 0 0 chr15 72437926 72437976 -31056998 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1137 297 306 24 0 chr15 72438676 72438846 -31056128 + (TATG)n Simple_repeat Simple_repeat 1 174 0 6 1137 338 291 19 0 chr15 72438874 72439032 -31055942 + (TATG)n Simple_repeat Simple_repeat 2 162 0 6 1137 228 67 0 0 chr15 72441070 72441100 -31053874 + (TCTCCC)n Simple_repeat Simple_repeat 3 32 0 6 1137 471 78 0 0 chr15 72441100 72441164 -31053810 + (TG)n Simple_repeat Simple_repeat 1 64 0 6 1137 260 292 33 99 chr15 72441885 72442037 -31052937 + L1MC1 LINE L1 42 183 -6217 6 1137 299 349 58 44 chr15 72442185 72442410 -31052564 + L1MC1 LINE L1 496 723 -5677 6 1137 423 311 78 25 chr15 72442540 72442784 -31052190 + L1MC1 LINE L1 1928 2184 -4216 6 1137 257 207 0 121 chr15 72442781 72442810 -31052164 + L1MC1 LINE L1 4368 4393 -1926 6 1137 2321 211 79 0 chr15 72442810 72443302 -31051672 + MT2A LTR ERVL 3 533 0 6 1137 257 207 0 121 chr15 72443302 72443338 -31051636 + L1MC1 LINE L1 4394 4425 -1894 6 1137 486 189 17 33 chr15 72443356 72443537 -31051437 + GA-rich Low_complexity Low_complexity 1 178 0 6 1137 595 202 6 27 chr15 72443556 72443739 -31051235 + GA-rich Low_complexity Low_complexity 2 180 0 6 1137 1746 284 81 46 chr15 72443792 72445161 -31049813 + L1MC1 LINE L1 4471 5882 -635 6 1137 462 257 176 6 chr15 72445501 72445677 -31049297 + L1MC1 LINE L1 5874 6079 -427 6 1137 343 308 15 29 chr15 72445710 72445847 -31049127 + L1MC1 LINE L1 6171 6305 -212 6 1137 2707 316 111 32 chr15 72445970 72448380 -31046594 + L1ME2z LINE L1 2360 5008 -1138 6 1137 365 238 12 12 chr15 72448472 72448553 -31046421 + B4 SINE B4 3 83 -209 6 1137 1258 222 123 43 chr15 72448564 72449213 -31045761 + RLTR40 LTR ERVK 27 727 -90 6 1137 275 286 52 0 chr15 72449249 72449326 -31045648 + B4A SINE B4 71 151 -141 6 1137 373 338 102 8 chr15 72449355 72449875 -31045099 + L1ME2z LINE L1 5319 5889 -290 6 1137 710 197 180 0 chr15 72450143 72450326 -31044648 - B3 SINE B2 0 216 1 6 1137 281 294 0 0 chr15 72450334 72450402 -31044572 + RCHARR1 DNA MER1_type 3 70 -904 6 1137 1045 320 10 3 chr15 72450474 72450772 -31044202 + RCHARR1 DNA MER1_type 109 408 -566 6 1137 6297 231 63 80 chr15 72450832 72453209 -31041765 + Lx9 LINE L1 3792 6191 -1282 6 1137 429 20 0 0 chr15 72453209 72453259 -31041715 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1137 3501 267 62 37 chr15 72453259 72454377 -31040597 + Lx9 LINE L1 6338 7483 -161 6 1137 1480 204 32 91 chr15 72454429 72454739 -31040235 + RCHARR1 DNA MER1_type 521 828 -146 6 1137 3436 82 34 20 chr15 72454739 72455234 -31039740 + Lx LINE L1 6151 6652 -2 6 1137 1480 204 32 91 chr15 72455234 72455295 -31039679 + RCHARR1 DNA MER1_type 829 870 -104 6 1137 489 34 0 0 chr15 72455311 72455370 -31039604 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1137 874 295 59 11 chr15 72457406 72457677 -31037297 + B4A SINE B4 3 286 -6 6 1137 729 149 0 0 chr15 72460541 72460648 -31034326 + B3 SINE B2 1 107 -109 6 1137 696 56 0 0 chr15 72460704 72460793 -31034181 + (GA)n Simple_repeat Simple_repeat 2 90 0 6 1137 318 289 167 22 chr15 72460832 72460970 -31034004 + HAL1-3A_ME LINE L1 2286 2443 -415 6 1137 198 206 0 40 chr15 72460971 72461047 -31033927 + GA-rich Low_complexity Low_complexity 2 74 0 6 1137 180 227 192 39 chr15 72461115 72461193 -31033781 + MIRb SINE MIR 63 152 -116 6 1137 219 98 0 90 chr15 72461277 72461355 -31033619 + (CAG)n Simple_repeat Simple_repeat 2 72 0 6 1137 576 42 0 0 chr15 72461386 72461457 -31033517 + (TG)n Simple_repeat Simple_repeat 1 71 0 6 1137 847 299 102 17 chr15 72461496 72462105 -31032869 - L1MB8 LINE L1 -199 5979 5297 6 1137 492 96 52 0 chr15 72462123 72462238 -31032736 + (TCTA)n Simple_repeat Simple_repeat 1 121 0 6 1137 417 39 0 0 chr15 72462278 72462329 -31032645 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1137 539 260 47 16 chr15 72462336 72462465 -31032509 - RSINE1 SINE B4 -22 143 11 6 1137 1204 225 70 15 chr15 72463281 72463608 -31031366 + MTC LTR MaLR 43 377 -2 6 1137 267 31 0 0 chr15 72465356 72465388 -31029586 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 6 1137 328 221 216 22 chr15 72468063 72468202 -31026772 + L1M4 LINE L1 4519 4684 -1462 6 1137 244 174 0 21 chr15 72469221 72469268 -31025706 - L1M4 LINE L1 -1073 5073 5028 6 1137 945 258 137 18 chr15 72469304 72469698 -31025276 - L1M4 LINE L1 -1198 4948 4508 6 1137 196 94 62 0 chr15 72470809 72470841 -31024133 - L3 LINE CR1 -126 4363 4330 6 1137 207 0 0 0 chr15 72470841 72470864 -31024110 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1137 770 159 71 0 chr15 72470971 72471097 -31023877 + B1_Mus1 SINE Alu 1 135 -13 6 1137 431 255 0 0 chr15 72471698 72471792 -31023182 + B4A SINE B4 183 276 -16 6 1137 342 0 0 0 chr15 72471801 72471839 -31023135 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1137 972 304 154 105 chr15 72471841 72472813 -31022161 + HAL1 LINE L1 1028 2068 -439 6 1137 820 287 14 0 chr15 72472813 72473029 -31021945 + ID_B1 SINE B4 1 219 -5 6 1137 972 304 154 105 chr15 72473029 72473150 -31021824 + HAL1 LINE L1 2069 2174 -333 6 1137 197 289 91 23 chr15 72474109 72474193 -31020781 - MIRb SINE MIR -135 133 41 6 1137 577 365 72 40 chr15 72476015 72476392 -31018582 - MLT1B LTR MaLR 0 390 2 6 1137 496 245 101 17 chr15 72477526 72477808 -31017166 - MTE2b LTR MaLR -8 371 4 6 1137 495 0 0 0 chr15 72479648 72479703 -31015271 + (TC)n Simple_repeat Simple_repeat 2 56 0 6 1137 387 0 0 0 chr15 72479703 72479745 -31015229 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1137 243 281 0 0 chr15 72481653 72481710 -31013264 - Tigger5 DNA MER2_type -60 2346 2290 6 1137 493 278 77 28 chr15 72481723 72481904 -31013070 - Tigger5 DNA MER2_type -2186 220 31 6 1138 411 21 0 0 chr15 72483014 72483062 -31011912 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1138 524 266 230 16 chr15 72483092 72483279 -31011695 - MLT1B LTR MaLR -4 386 160 6 1138 214 306 46 46 chr15 72483337 72483402 -31011572 - RSINE1 SINE B4 -27 138 74 6 1138 327 244 48 40 chr15 72483377 72483501 -31011473 - MLT1B LTR MaLR -231 236 112 6 1138 362 286 127 14 chr15 72485446 72485588 -31009386 + MLT1E2 LTR MaLR 312 469 -158 6 1138 790 95 0 0 chr15 72486395 72486511 -31008463 + L1_Mus1 LINE L1 6451 6566 -1 6 1138 297 51 0 0 chr15 72486515 72486554 -31008420 + (A)n Simple_repeat Simple_repeat 1 39 0 6 1138 21 0 0 0 chr15 72487919 72487940 -31007034 + AT_rich Low_complexity Low_complexity 1 21 0 6 1138 429 20 0 0 chr15 72489214 72489264 -31005710 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1138 427 281 1 0 chr15 72493319 72493415 -31001559 - PB1D10 SINE Alu -48 99 3 6 1138 269 339 87 0 chr15 72493415 72493446 -31001528 - B4 SINE B4 -198 94 54 6 1138 913 272 67 30 chr15 72493455 72493670 -31001304 + B4 SINE B4 2 216 -76 6 1138 192 40 0 0 chr15 72493670 72493695 -31001279 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 6 1138 913 272 67 30 chr15 72493695 72493748 -31001226 + B4 SINE B4 217 280 -12 6 1138 195 42 0 0 chr15 72493801 72493825 -31001149 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 1138 180 175 190 17 chr15 72495149 72495207 -30999767 + L2 LINE L2 589 656 -2763 6 1138 338 325 116 40 chr15 72496129 72496328 -30998646 + MLT1J LTR MaLR 44 257 -255 6 1138 236 241 69 0 chr15 72496441 72496499 -30998475 + MLT1J LTR MaLR 444 505 -7 6 1138 426 79 0 0 chr15 72498380 72498443 -30996531 + (GGGA)n Simple_repeat Simple_repeat 3 65 0 6 1138 24 32 0 0 chr15 72498558 72498589 -30996385 + AT_rich Low_complexity Low_complexity 1 31 0 6 1138 264 167 21 0 chr15 72499922 72499970 -30995004 - RMER30 DNA MER1_type -146 56 8 6 1138 336 102 0 0 chr15 72500010 72500059 -30994915 + (ATG)n Simple_repeat Simple_repeat 1 49 0 1 1138 365 164 0 0 chr15 72500065 72500120 -30994854 - ID4_ SINE ID -6 77 23 2 1138 281 130 0 115 chr15 72500068 72500129 -30994845 - tRNA-Ala-GCA tRNA tRNA -7 68 15 3 1138 345 24 0 0 chr15 72503695 72503737 -30991237 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1138 183 345 0 77 chr15 72504732 72504823 -30990151 - L2 LINE L2 -3309 110 27 5 1138 312 323 95 16 chr15 72506066 72506192 -30988782 - MIRb SINE MIR -23 245 110 6 1138 226 242 16 16 chr15 72507477 72507540 -30987434 - CYRA11_Mm Unknown Y-chromosome -495 122 60 7 1138 185 196 67 67 chr15 72508077 72508137 -30986837 - MIRb SINE MIR -181 87 28 8 1138 216 0 0 0 chr15 72510279 72510303 -30984671 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 9 1138 2615 134 12 36 chr15 72510676 72511093 -30983881 + MTB_Mm LTR MaLR 1 407 0 1 1138 219 103 0 0 chr15 72512198 72512237 -30982737 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1138 477 0 0 0 chr15 72512237 72512289 -30982685 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 1138 275 273 36 108 chr15 72512630 72512741 -30982233 - MIR SINE MIR -69 139 37 1 1138 213 39 0 0 chr15 72512942 72512968 -30982006 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 1 1138 492 105 0 0 chr15 72513273 72513349 -30981625 + (TC)n Simple_repeat Simple_repeat 1 76 0 1 1138 575 202 0 58 chr15 72518379 72518500 -30976474 + PB1D10 SINE Alu 4 117 0 1 1138 448 222 70 10 chr15 72521473 72521573 -30973401 + U2 snRNA snRNA 4 109 -79 1 1138 243 0 0 0 chr15 72522295 72522322 -30972652 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1138 232 352 33 0 chr15 72524934 72525025 -30969949 + L2b LINE L2 3263 3356 -19 1 1138 239 0 32 0 chr15 72525646 72525677 -30969297 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 1138 476 299 51 0 chr15 72525915 72526052 -30968922 + B1F SINE Alu 1 144 -5 2 1138 2591 52 59 38 chr15 72526064 72526403 -30968571 + ORR1A1 LTR MaLR 1 346 0 2 1138 411 274 50 17 chr15 72526459 72526578 -30968396 + RSINE1 SINE B4 26 148 -17 2 1138 423 160 0 0 chr15 72526800 72526875 -30968099 + CT-rich Low_complexity Low_complexity 3 77 0 2 1138 303 330 65 9 chr15 72527647 72527754 -30967220 + L1MB8 LINE L1 6039 6151 -27 2 1138 570 269 15 0 chr15 72528948 72529078 -30965896 + RSINE1 SINE B4 5 136 -29 2 1138 265 376 31 62 chr15 72529078 72529141 -30965833 + B3 SINE B2 4 190 -26 2 1138 1318 99 61 0 chr15 72529981 72530162 -30964812 - B2_Mm2 SINE B2 -2 193 2 2 1138 312 333 39 45 chr15 72532679 72532858 -30962116 + L1M5 LINE L1 5254 5431 -731 2 1138 308 240 146 51 chr15 72532897 72533055 -30961919 + RLTR21 LTR ERVK 1071 1243 -329 3 1138 27 49 0 0 chr15 72533059 72533100 -30961874 + AT_rich Low_complexity Low_complexity 1 41 0 3 1138 458 254 150 57 chr15 72533151 72533431 -30961543 - Lx9 LINE L1 -1554 6090 5785 3 1138 183 156 0 0 chr15 72533456 72533488 -30961486 + (TATG)n Simple_repeat Simple_repeat 1 32 0 3 1138 244 299 0 29 chr15 72537476 72537545 -30957429 + polypurine Low_complexity Low_complexity 2 68 0 3 1138 270 0 0 0 chr15 72538145 72538175 -30956799 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 3 1138 298 162 0 26 chr15 72541612 72541688 -30953286 + GA-rich Low_complexity Low_complexity 4 77 0 3 1138 389 294 37 60 chr15 72542131 72542265 -30952709 + MIRb SINE MIR 7 140 -128 3 1138 342 264 128 27 chr15 72542581 72542729 -30952245 + L1M5 LINE L1 3244 3406 -2740 3 1138 889 330 47 30 chr15 72542792 72543366 -30951608 + L1MB8 LINE L1 5594 6177 -1 3 1138 2060 157 23 66 chr15 72543705 72544100 -30950874 + ORR1C1 LTR MaLR 1 378 0 4 1138 181 295 112 37 chr15 72545396 72545461 -30949513 + MIR SINE MIR 17 90 -172 4 1138 516 32 0 0 chr15 72545461 72545523 -30949451 + (TTCC)n Simple_repeat Simple_repeat 2 63 0 4 1138 181 295 112 37 chr15 72545523 72545591 -30949383 + MIR SINE MIR 91 160 -102 4 1138 193 318 82 31 chr15 72545725 72545884 -30949090 - MIRb SINE MIR -23 245 79 4 1138 1570 278 17 15 chr15 72546381 72546848 -30948126 + Lx8 LINE L1 6781 7248 -225 4 1138 221 171 0 0 chr15 72546937 72546978 -30947996 + C-rich Low_complexity Low_complexity 5 45 0 4 1138 243 317 0 12 chr15 72547515 72547598 -30947376 + ID4_ SINE ID 2 83 0 4 1138 225 94 0 0 chr15 72547636 72547668 -30947306 + (GA)n Simple_repeat Simple_repeat 2 33 0 4 1138 250 295 119 14 chr15 72547803 72548013 -30946961 + L1MD LINE L1 4941 5172 -974 4 1138 243 88 0 0 chr15 72548811 72548845 -30946129 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 4 1138 1523 196 79 109 chr15 72549789 72550279 -30944695 - RMER20B LTR ERVK -42 474 1 5 1138 322 271 133 0 chr15 72550424 72550515 -30944459 + PB1D10 SINE Alu 24 120 -7 5 1138 750 119 90 0 chr15 72551361 72551495 -30943479 - URR1A DNA MER1_type 0 226 81 5 1138 4854 141 72 95 chr15 72551496 72552547 -30942427 - RLTR25B LTR ERVK 0 1028 2 5 1138 241 195 0 0 chr15 72552554 72552595 -30942379 - URR1A DNA MER1_type -185 41 1 5 1138 759 215 0 0 chr15 72554553 72554730 -30940244 + (CATATA)n Simple_repeat Simple_repeat 2 178 0 5 1138 445 303 61 52 chr15 72554889 72555119 -30939855 - MLT1D LTR MaLR -273 232 1 5 1138 254 239 0 0 chr15 72555444 72555511 -30939463 + GA-rich Low_complexity Low_complexity 1 67 0 5 1138 312 27 0 0 chr15 72555512 72555549 -30939425 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 1138 270 0 0 0 chr15 72555549 72555578 -30939396 + (GA)n Simple_repeat Simple_repeat 1 30 0 5 1138 765 0 0 0 chr15 72556430 72556515 -30938459 + (GAGAA)n Simple_repeat Simple_repeat 4 88 0 5 1138 940 272 9 9 chr15 72561482 72561701 -30933273 - ID_B1 SINE B4 0 224 6 6 1138 180 97 0 0 chr15 72561832 72561863 -30933111 + (CCCTAA)n Simple_repeat Simple_repeat 5 35 0 6 1138 219 36 0 0 chr15 72561954 72561982 -30932992 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 6 1138 435 301 50 102 chr15 72564372 72564649 -30930325 + MLT1A0 LTR MaLR 1 284 -90 6 1138 308 127 18 0 chr15 72565670 72565725 -30929249 + (GGAGA)n Simple_repeat Simple_repeat 4 59 0 6 1138 1078 268 20 41 chr15 72566080 72566372 -30928602 - B4A SINE B4 -6 286 1 6 1138 457 281 24 32 chr15 72566491 72566616 -30928358 - B4A SINE B4 -13 279 156 6 1138 288 293 100 39 chr15 72566637 72566868 -30928106 - L1M5 LINE L1 -534 5645 5401 6 1138 190 204 40 20 chr15 72567522 72567572 -30927402 + MIR SINE MIR 73 123 -139 6 1138 254 279 60 88 chr15 72567953 72568169 -30926805 + MLT1J LTR MaLR 216 425 -87 6 1138 231 36 0 0 chr15 72568792 72568820 -30926154 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 1138 504 48 0 0 chr15 72568820 72568882 -30926092 + (GA)n Simple_repeat Simple_repeat 2 64 0 7 1138 198 0 0 0 chr15 72569132 72569154 -30925820 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1138 231 267 83 28 chr15 72570089 72570270 -30924704 + L1M5 LINE L1 4412 4602 -1544 7 1138 231 36 0 0 chr15 72570328 72570356 -30924618 + (GAAAA)n Simple_repeat Simple_repeat 4 31 0 7 1138 246 221 133 114 chr15 72570611 72570769 -30924205 + RMER15 LTR ERVL 1 161 -414 7 1138 311 321 71 0 chr15 72570780 72570892 -30924082 + RMER15 LTR ERVL 302 421 -154 7 1138 354 302 110 26 chr15 72571058 72571330 -30923644 + L1M5 LINE L1 5087 5381 -765 7 1138 995 170 114 34 chr15 72571757 72571994 -30922980 + ORR1D1 LTR MaLR 1 256 -118 7 1138 399 366 71 77 chr15 72572038 72572517 -30922457 - LTR16E2 LTR ERVL 0 568 93 7 1138 282 358 99 38 chr15 72572666 72572955 -30922019 - L2a LINE L2 -261 3165 2810 7 1138 241 276 26 13 chr15 72573685 72573762 -30921212 + L1MEf LINE L1 987 1064 -5483 7 1138 384 335 105 57 chr15 72574146 72574460 -30920514 + L1MEf LINE L1 1611 1939 -4701 7 1138 255 311 0 0 chr15 72574644 72574734 -30920240 + L1MEf LINE L1 2755 2844 -3700 7 1138 333 354 79 0 chr15 72574757 72574921 -30920053 + L1MD LINE L1 2508 2684 -3462 8 1138 236 77 0 49 chr15 72575281 72575322 -30919652 - Lx4A LINE L1 -524 6534 6496 8 1138 4696 102 12 3 chr15 72575315 72576005 -30918969 - L1_Mur2 LINE L1 -9 5868 5173 8 1138 353 316 63 35 chr15 72576108 72576281 -30918693 + L1MEf LINE L1 3766 3954 -2590 7 1138 24 53 0 0 chr15 72576286 72576324 -30918650 + AT_rich Low_complexity Low_complexity 1 38 0 8 1138 1030 233 20 0 chr15 72576576 72576778 -30918196 + B3 SINE B2 1 206 -10 8 1138 708 251 22 13 chr15 72576855 72577052 -30917922 + B3A SINE B2 1 185 -10 8 1138 198 0 0 0 chr15 72577510 72577532 -30917442 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1138 180 306 0 31 chr15 72577721 72577785 -30917189 - MIRc SINE MIR -114 154 93 8 1138 1001 206 21 84 chr15 72577862 72578101 -30916873 - URR1A DNA MER1_type 0 226 3 8 1138 243 307 0 33 chr15 72578566 72578657 -30916317 - B4 SINE B4 -199 93 6 8 1138 435 317 33 8 chr15 72578793 72578914 -30916060 - RSINE1 SINE B4 -39 126 3 9 1138 320 111 0 18 chr15 72580153 72580208 -30914766 + (GGGAGA)n Simple_repeat Simple_repeat 5 58 0 9 1138 252 0 0 0 chr15 72580757 72580785 -30914189 + (CAA)n Simple_repeat Simple_repeat 3 30 0 9 1138 527 325 75 35 chr15 72580805 72581006 -30913968 + B4A SINE B4 84 292 0 9 1138 297 75 0 0 chr15 72581027 72581067 -30913907 + (CA)n Simple_repeat Simple_repeat 1 40 0 9 1138 321 266 66 53 chr15 72582160 72582311 -30912663 - L1M5 LINE L1 -347 5817 5665 9 1138 183 184 0 0 chr15 72582311 72582349 -30912625 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 1138 371 294 32 0 chr15 72582500 72582626 -30912348 - L1M5 LINE L1 -946 5498 5369 9 1138 246 32 0 0 chr15 72582689 72582720 -30912254 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 1138 219 344 16 0 chr15 72582761 72582822 -30912152 - RSINE1 SINE B4 -21 144 83 9 1138 242 246 68 34 chr15 72583156 72583285 -30911689 - L1M5 LINE L1 -975 5171 5035 9 1138 270 279 107 71 chr15 72583340 72583649 -30911325 - L1MC LINE L1 -1283 4863 4544 9 1138 319 306 32 64 chr15 72583879 72584036 -30910938 - L1M5 LINE L1 -1934 4212 4061 9 1138 319 334 135 54 chr15 72584145 72584788 -30910186 - L1M5 LINE L1 -2260 3886 3192 9 1138 413 286 176 16 chr15 72585096 72585284 -30909690 - L1M5 LINE L1 -3625 2521 2304 9 1138 440 157 22 0 chr15 72585732 72585821 -30909153 + (CATA)n Simple_repeat Simple_repeat 4 94 0 1 1138 773 199 13 20 chr15 72589278 72589427 -30905547 + B3 SINE B2 2 149 -67 1 1138 231 88 0 0 chr15 72589427 72589461 -30905513 + (TCTG)n Simple_repeat Simple_repeat 2 35 0 1 1138 183 80 0 0 chr15 72589591 72589616 -30905358 + (CAGAA)n Simple_repeat Simple_repeat 4 28 0 1 1138 1033 200 101 41 chr15 72589871 72590222 -30904752 - MTC LTR MaLR -8 413 5 1 1138 436 319 116 23 chr15 72590862 72591301 -30903673 - L1MB3 LINE L1 -115 6068 5589 1 1138 594 0 0 0 chr15 72591950 72592016 -30902958 + (TC)n Simple_repeat Simple_repeat 1 66 0 1 1138 793 220 69 6 chr15 72592852 72593026 -30901948 - MTE2a LTR MaLR 0 379 195 1 1138 344 317 15 54 chr15 72593009 72593139 -30901835 + RSINE1 SINE B4 8 132 -33 1 1138 501 47 0 0 chr15 72593141 72593205 -30901769 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 1138 183 100 0 0 chr15 72593205 72593234 -30901740 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1138 647 317 123 52 chr15 72593240 72593686 -30901288 + L1MD LINE L1 3624 4101 -2045 1 1138 280 341 83 45 chr15 72593748 72594037 -30900937 + L1M5 LINE L1 5522 5821 -343 1 1138 405 0 0 0 chr15 72595413 72595458 -30899516 + (CAAAAA)n Simple_repeat Simple_repeat 3 47 0 1 1138 310 295 105 26 chr15 72595518 72595671 -30899303 - L1M5 LINE L1 -741 5432 5268 1 1138 264 241 80 29 chr15 72595786 72595923 -30899051 + L1MC LINE L1 4789 4932 -1214 1 1138 841 165 0 0 chr15 72596082 72596209 -30898765 - B1_Mus1 SINE Alu -6 142 16 1 1138 188 214 48 0 chr15 72596972 72597014 -30897960 - MIRb SINE MIR -196 72 29 1 1138 245 286 0 0 chr15 72597225 72597281 -30897693 + ID SINE ID 8 63 -161 1 1138 181 366 29 19 chr15 72598314 72598417 -30896557 + MIR SINE MIR 159 262 0 1 1138 1223 271 52 14 chr15 72598942 72599286 -30895688 + MTE2b LTR MaLR 19 375 -4 1 1138 3348 108 9 209 chr15 72600534 72600902 -30894072 + MT2B LTR ERVL 1 345 -256 1 1138 567 43 0 0 chr15 72600902 72600972 -30894002 + (TCC)n Simple_repeat Simple_repeat 3 72 0 1 1138 3348 108 9 209 chr15 72600972 72601354 -30893620 + MT2B LTR ERVL 346 601 0 1 1138 239 250 0 35 chr15 72604188 72604246 -30890728 + ID_B1 SINE B4 168 223 -1 1 1138 787 131 11 28 chr15 72604285 72604466 -30890508 + GA-rich Low_complexity Low_complexity 1 178 0 1 1138 1118 234 48 105 chr15 72604505 72604559 -30890415 - MTEa LTR MaLR -3 376 323 1 1138 1158 246 82 46 chr15 72604559 72604925 -30890049 - MTEa LTR MaLR 0 379 1 1 1138 1118 234 48 105 chr15 72604925 72605242 -30889732 - MTEa LTR MaLR -57 322 26 1 1138 480 240 47 31 chr15 72605246 72605375 -30889599 + RSINE1 SINE B4 2 132 -33 1 1138 228 271 146 70 chr15 72605375 72605417 -30889557 + B2_Mm2 SINE B2 1 184 -11 1 1138 187 322 0 61 chr15 72606985 72607051 -30887923 + MIR SINE MIR 86 147 -61 1 1138 1273 173 258 100 chr15 72607844 72608243 -30886731 + MT2A LTR ERVL 1 462 -71 1 1138 639 39 0 0 chr15 72608265 72608343 -30886631 + (TAGA)n Simple_repeat Simple_repeat 1 78 0 1 1138 592 259 29 90 chr15 72608414 72608792 -30886182 + L1MB1 LINE L1 5813 6167 -1 1 1138 234 0 0 0 chr15 72610567 72610593 -30884381 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1138 288 111 0 0 chr15 72610900 72610954 -30884020 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1138 546 211 0 0 chr15 72612564 72612744 -30882230 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1138 555 221 0 0 chr15 72612759 72613025 -30881949 + (TG)n Simple_repeat Simple_repeat 1 266 0 1 1138 633 194 0 0 chr15 72613056 72613236 -30881738 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1138 377 304 50 21 chr15 72613321 72613462 -30881512 + MER2 DNA MER2_type 195 339 -6 1 142 344 267 0 50 chr15 72613808 72613989 -30880985 + (TG)n Simple_repeat Simple_repeat 1 172 0 1 1139 727 236 39 17 chr15 72614228 72614409 -30880565 + B4A SINE B4 1 185 -107 1 1139 333 0 0 0 chr15 72614426 72614463 -30880511 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 1 1139 324 127 0 0 chr15 72614500 72614555 -30880419 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 1139 1753 182 74 17 chr15 72614637 72614989 -30879985 + ORR1D1 LTR MaLR 3 374 0 1 1139 5307 229 68 18 chr15 72614989 72616294 -30878680 + ORR1D1-int LTR MaLR 1 1370 0 1 1139 246 128 0 0 chr15 72616343 72616382 -30878592 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1139 488 132 0 36 chr15 72616399 72616509 -30878465 + (TA)n Simple_repeat Simple_repeat 2 107 0 1 1139 222 71 0 0 chr15 72616509 72616537 -30878437 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1139 1399 160 165 30 chr15 72616537 72616834 -30878140 + ORR1D1 LTR MaLR 38 374 0 1 1139 498 17 0 0 chr15 72617987 72618046 -30876928 + (TC)n Simple_repeat Simple_repeat 1 59 0 1 1139 227 273 0 18 chr15 72618105 72618161 -30876813 + MLT1A LTR MaLR 320 374 0 1 1139 1234 293 197 7 chr15 72619070 72619791 -30875183 + L1MA4 LINE L1 5070 5926 -374 1 1139 216 0 0 0 chr15 72619986 72620010 -30874964 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1139 1375 133 180 38 chr15 72620010 72620314 -30874660 - RLTR20A2 LTR ERVK -102 432 1 1 1139 258 32 0 0 chr15 72622258 72622289 -30872685 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1139 313 215 0 147 chr15 72622297 72622406 -30872568 + MLT1A0 LTR MaLR 2 94 -271 1 1139 384 22 0 0 chr15 72622446 72622491 -30872483 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1139 374 335 61 34 chr15 72625048 72625311 -30869663 + L1M5 LINE L1 5494 5763 -361 1 1139 972 136 143 26 chr15 72626159 72626348 -30868626 + URR1A DNA MER1_type 1 211 -15 1 1139 1228 135 87 0 chr15 72627912 72628119 -30866855 - URR1A DNA MER1_type -1 225 1 1 1139 230 361 61 27 chr15 72628618 72628766 -30866208 + L2a LINE L2 3267 3419 -7 1 1139 26 0 0 0 chr15 72629043 72629069 -30865905 + GC_rich Low_complexity Low_complexity 1 26 0 1 1139 460 277 75 69 chr15 72629665 72629824 -30865150 + B3A SINE B2 3 162 -36 1 1139 1244 311 79 15 chr15 72630269 72630802 -30864172 - L1MA6 LINE L1 -345 5955 5389 1 1139 456 19 0 0 chr15 72631714 72631767 -30863207 + (CTG)n Simple_repeat Simple_repeat 2 54 0 1 1139 231 146 0 0 chr15 72631767 72631808 -30863166 + (TCC)n Simple_repeat Simple_repeat 2 42 0 1 1139 22 56 0 0 chr15 72635129 72635165 -30859809 + AT_rich Low_complexity Low_complexity 1 36 0 1 1139 629 281 12 12 chr15 72635621 72635787 -30859187 + B4A SINE B4 2 167 -125 1 1139 185 139 23 0 chr15 72635801 72635844 -30859130 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1139 260 306 209 28 chr15 72636376 72636625 -30858349 - L2 LINE L2 -416 3003 2710 1 1139 216 0 0 0 chr15 72639246 72639270 -30855704 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1 1139 387 89 0 0 chr15 72641766 72641822 -30853152 + (T)n Simple_repeat Simple_repeat 1 56 0 1 1139 198 0 0 0 chr15 72642454 72642476 -30852498 + (GTTTG)n Simple_repeat Simple_repeat 2 23 0 1 1139 532 225 100 0 chr15 72643333 72643453 -30851521 + B1F2 SINE Alu 1 132 -17 1 1139 268 23 44 22 chr15 72643938 72643983 -30850991 + (CACCC)n Simple_repeat Simple_repeat 1 46 0 1 1139 264 66 98 0 chr15 72645670 72645731 -30849243 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 1 1139 216 268 106 35 chr15 72646244 72646329 -30848645 - MIR3 SINE MIR 0 208 118 1 1139 387 0 0 0 chr15 72647418 72647461 -30847513 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1139 852 289 13 90 chr15 72647589 72647670 -30847304 + B4 SINE B4 2 78 -214 1 1139 850 242 4 49 chr15 72647670 72647896 -30847078 + B3 SINE B2 1 216 0 1 1139 852 289 13 90 chr15 72647896 72648114 -30846860 + B4 SINE B4 79 278 -14 1 1139 315 146 0 0 chr15 72648119 72648174 -30846800 + (CCCCCT)n Simple_repeat Simple_repeat 1 55 0 1 1139 200 316 0 0 chr15 72648336 72648393 -30846581 + MIRc SINE MIR 83 139 -129 1 1139 234 336 70 35 chr15 72648585 72648727 -30846247 + LTR33A_ LTR ERVL 43 189 -342 1 1139 225 0 0 0 chr15 72650447 72650472 -30844502 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1139 274 221 29 0 chr15 72651671 72651739 -30843235 + CT-rich Low_complexity Low_complexity 3 72 0 1 1139 309 159 0 14 chr15 72651742 72651812 -30843162 - Lx7 LINE L1 -12 7684 7616 1 1139 1236 96 25 41 chr15 72651880 72652076 -30842898 + B2_Mm2 SINE B2 3 195 0 1 1139 3379 144 16 8 chr15 72652304 72652928 -30842046 + L1_Mur2 LINE L1 3102 3730 -2156 1 1139 8266 150 3 6 chr15 72652922 72654357 -30840617 + L1_Mur2 LINE L1 4266 5696 -181 1 1139 242 246 73 42 chr15 72654936 72655148 -30839826 + MMSAT4 Satellite Satellite 1 218 -1 1 1139 264 267 51 44 chr15 72655257 72655478 -30839496 + MMSAT4 Satellite Satellite 1 222 0 1 1139 511 256 157 0 chr15 72655726 72655917 -30839057 + MTE-int LTR MaLR 1163 1383 -197 1 1139 271 365 31 10 chr15 72655934 72656031 -30838943 + RSINE1 SINE B4 65 163 -2 1 1139 497 361 22 27 chr15 72656097 72656319 -30838655 + MTE2b LTR MaLR 3 223 -156 1 1139 478 272 22 7 chr15 72656346 72656472 -30838502 + ORR1C1 LTR MaLR 3 130 -248 1 1139 1829 107 10 81 chr15 72656472 72656768 -30838206 + ORR1A3 LTR MaLR 1 275 -51 1 1139 8685 102 15 6 chr15 72656774 72658083 -30836891 + Lx2A LINE L1 5686 7006 -2 1 1139 1784 296 76 22 chr15 72658166 72659311 -30835663 + L1_Mur3 LINE L1 1282 2488 -3392 1 1139 3768 200 31 20 chr15 72659304 72660109 -30834865 + Lx9 LINE L1 6559 7372 -272 1 1139 745 247 6 6 chr15 72660127 72660206 -30834768 + Lx8 LINE L1 6621 6700 -773 1 1139 297 0 0 0 chr15 72660206 72660239 -30834735 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1139 745 247 6 6 chr15 72660239 72660338 -30834636 + Lx8 LINE L1 6701 6798 -675 1 1139 1644 92 9 0 chr15 72660338 72660565 -30834409 + MTB_Mm LTR MaLR 1 229 -178 1 1139 505 301 4 4 chr15 72661199 72661453 -30833521 + (TCCA)n Simple_repeat Simple_repeat 1 254 0 1 1139 396 0 0 0 chr15 72661453 72661497 -30833477 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1139 505 244 0 11 chr15 72661497 72661592 -30833382 + (TCCA)n Simple_repeat Simple_repeat 3 96 0 1 1139 335 354 40 62 chr15 72662866 72663008 -30831966 + MLT1E1 LTR MaLR 384 522 -158 2 1139 2875 62 69 13 chr15 72663008 72663397 -30831577 - RLTR10A LTR ERVK 0 411 1 2 1139 335 353 38 63 chr15 72663397 72663548 -30831426 + MLT1E1 LTR MaLR 497 646 -8 2 1139 191 289 129 29 chr15 72664019 72664190 -30830784 + L2 LINE L2 2673 2860 -559 2 1139 1184 135 130 0 chr15 72664835 72665035 -30829939 - URR1A DNA MER1_type 0 226 1 2 1139 1687 232 32 9 chr15 72666397 72666741 -30828233 - MTE2b LTR MaLR 0 379 28 2 1139 962 262 5 0 chr15 72666991 72667205 -30827769 - ID_B1 SINE B4 -7 217 3 2 1139 406 242 55 118 chr15 72668067 72668287 -30826687 - MIRb SINE MIR -45 223 18 2 1139 786 206 51 5 chr15 72668436 72668631 -30826343 + Lx LINE L1 6451 6654 0 2 1139 1207 266 12 121 chr15 72668833 72669239 -30825735 + MTEa LTR MaLR 8 369 -10 2 1139 228 232 0 18 chr15 72669247 72669304 -30825670 + G-rich Low_complexity Low_complexity 2 57 0 2 1139 1128 267 70 35 chr15 72669336 72669650 -30825324 - MTE2b LTR MaLR -38 341 17 2 1139 1098 100 28 34 chr15 72670090 72670266 -30824708 + B2_Mm2 SINE B2 3 177 -18 2 1139 28 29 0 0 chr15 72670290 72670325 -30824649 + AT_rich Low_complexity Low_complexity 1 35 0 2 1139 817 240 66 24 chr15 72670349 72670562 -30824412 + B4 SINE B4 1 222 -70 2 1139 277 169 56 84 chr15 72670622 72670693 -30824281 + L1MC4 LINE L1 6936 7004 -1038 2 1139 1122 259 66 77 chr15 72670718 72671187 -30823787 + RLTR12B LTR ERVK 47 510 -18 2 1139 235 322 87 33 chr15 72671365 72671548 -30823426 + L1MC4 LINE L1 7330 7522 -520 2 1139 490 242 59 24 chr15 72672166 72672335 -30822639 - L1M5 LINE L1 -317 5807 5633 2 1139 697 318 65 60 chr15 72673801 72674353 -30820621 + L1M4 LINE L1 3516 4070 -2070 2 1139 1330 169 53 8 chr15 72674352 72674596 -30820378 - L1_Mur2 LINE L1 -71 5806 5552 2 1139 13148 143 24 13 chr15 72674596 72676868 -30818106 - L1_Mur2 LINE L1 -602 5275 2979 2 1139 4851 226 81 12 chr15 72676870 72678019 -30816955 + Lx5 LINE L1 5818 7045 -5 2 1139 785 274 67 52 chr15 72678084 72678185 -30816789 + L1M4 LINE L1 4105 4195 -1951 2 1139 1206 61 0 0 chr15 72678185 72678332 -30816642 + B1_Mm SINE Alu 1 147 0 2 1139 554 41 0 14 chr15 72678333 72678407 -30816567 + (GAAA)n Simple_repeat Simple_repeat 4 76 0 2 1139 785 274 67 52 chr15 72678407 72678723 -30816251 + L1M4 LINE L1 4196 4530 -1616 2 1139 285 256 198 0 chr15 72678758 72678844 -30816130 - PB1D10 SINE Alu -14 103 1 2 1139 927 197 94 217 chr15 72678881 72679315 -30815659 + ORR1C2 LTR MaLR 4 384 0 2 1139 219 36 0 0 chr15 72679488 72679516 -30815458 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 2 1139 259 211 0 19 chr15 72679808 72679861 -30815113 - PB1D7 SINE Alu -68 52 1 2 1139 1353 31 0 0 chr15 72683657 72683817 -30811157 + B2_Mm1a SINE B2 1 160 -33 2 1139 383 52 0 17 chr15 72683817 72683876 -30811098 + (TAAA)n Simple_repeat Simple_repeat 3 60 0 2 1139 406 323 91 101 chr15 72684220 72684736 -30810238 - L1MC LINE L1 -1896 4250 3740 2 1139 183 80 0 0 chr15 72684744 72684769 -30810205 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1139 597 195 111 24 chr15 72685780 72685906 -30809068 - ID_B1 SINE B4 -8 216 80 2 1139 21 0 0 0 chr15 72686135 72686156 -30808818 + AT_rich Low_complexity Low_complexity 1 21 0 2 1139 357 109 0 0 chr15 72686738 72686793 -30808181 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 1139 197 282 85 49 chr15 72686845 72686927 -30808047 - L2c LINE L2 -6 3381 3297 2 1139 1903 277 109 24 chr15 72687225 72687897 -30807077 + Lx8 LINE L1 6743 7471 -2 2 1139 248 274 67 141 chr15 72687674 72687929 -30807045 + RMER1C Other Other 1106 1341 -1 2 1139 1623 171 77 76 chr15 72687946 72688510 -30806464 - ORR1A1-int LTR MaLR -650 859 304 2 1139 469 302 111 5 chr15 72688533 72688723 -30806251 - L1M4 LINE L1 -1925 4221 4012 2 1139 1466 52 0 68 chr15 72690134 72690341 -30804633 + B2_Mm2 SINE B2 3 195 0 2 1139 234 0 0 0 chr15 72691819 72691845 -30803129 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 1139 313 355 94 38 chr15 72692323 72692589 -30802385 - L1ME4a LINE L1 -223 5901 5621 2 1139 265 276 98 62 chr15 72692595 72692707 -30802267 + MLT1D LTR MaLR 2 117 -388 2 1139 271 292 161 78 chr15 72692744 72692870 -30802104 + MLT1D LTR MaLR 220 339 -166 2 1139 282 56 0 0 chr15 72692870 72692906 -30802068 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1139 271 292 161 78 chr15 72692906 72693009 -30801965 + MLT1D LTR MaLR 340 467 -38 2 1139 196 262 181 19 chr15 72693666 72693771 -30801203 + L2a LINE L2 3296 3417 -9 2 1139 210 276 0 33 chr15 72694474 72694534 -30800440 - MIRb SINE MIR -93 175 118 2 1139 206 367 123 15 chr15 72694653 72694783 -30800191 - MIRb SINE MIR -51 217 74 2 1139 242 407 91 5 chr15 72695329 72695539 -30799435 + L2b LINE L2 3146 3373 -2 2 1139 250 227 108 37 chr15 72695583 72695728 -30799246 + L1MB3 LINE L1 6000 6175 -8 2 1139 774 306 150 25 chr15 72698470 72699114 -30795860 - L1MB5 LINE L1 -8 6166 5405 2 1139 232 268 84 12 chr15 72699282 72699365 -30795609 - L2b LINE L2 -8 3367 3279 2 1139 531 0 0 0 chr15 72699717 72699776 -30795198 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1139 1178 48 143 40 chr15 72700909 72701084 -30793890 + B2_Mm1a SINE B2 1 193 0 2 1139 202 302 153 38 chr15 72702694 72702825 -30792149 - MIRb SINE MIR -78 190 45 2 1139 339 275 281 30 chr15 72703379 72703766 -30791208 - L1MB5 LINE L1 -130 6048 5569 2 1139 847 210 96 15 chr15 72703858 72704056 -30790918 + B3A SINE B2 1 214 -2 2 1139 1438 257 69 26 chr15 72705350 72705736 -30789238 - MTD LTR MaLR -14 405 1 2 1139 741 322 91 39 chr15 72705777 72706346 -30788628 - L1ME1 LINE L1 -316 5863 5265 2 1139 304 328 0 92 chr15 72706545 72706686 -30788288 - L1MD LINE L1 -1083 5063 4936 2 1139 2176 292 49 32 chr15 72706805 72707274 -30787700 - L1M2 LINE L1 -461 5419 4931 2 1139 1540 170 93 77 chr15 72707274 72707650 -30787324 - ORR1C2 LTR MaLR -2 382 1 2 1139 2176 293 54 33 chr15 72707650 72708297 -30786677 - L1M2 LINE L1 -1180 4963 4254 2 1139 854 295 82 15 chr15 72708698 72709090 -30785884 - L1M2 LINE L1 -1852 4291 3874 2 1139 291 261 91 0 chr15 72709105 72709193 -30785781 - B3 SINE B2 -17 199 104 2 1139 345 271 82 44 chr15 72709194 72709329 -30785645 - L1MD LINE L1 -2930 3216 3077 2 1139 267 263 26 124 chr15 72709329 72709442 -30785532 - PB1D10 SINE Alu -15 102 1 2 1139 515 318 105 68 chr15 72709448 72710011 -30784963 - L1MEg LINE L1 -3048 3098 2532 2 1139 495 48 0 0 chr15 72710011 72710073 -30784901 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1139 515 318 109 58 chr15 72710073 72710495 -30784479 - L1MEg LINE L1 -3615 2531 2068 2 1139 470 201 71 22 chr15 72710497 72710680 -30784294 - B3A SINE B2 -1 194 2 2 1139 236 288 14 14 chr15 72710837 72710911 -30784063 - L1MEg LINE L1 -4929 1313 1240 2 1139 255 305 31 21 chr15 72710964 72711061 -30783913 - L1MEg LINE L1 -4988 1254 1157 2 1139 873 37 0 0 chr15 72711791 72711900 -30783074 + (GA)n Simple_repeat Simple_repeat 2 110 0 2 1139 205 250 45 0 chr15 72712739 72712783 -30782191 - L2b LINE L2 -22 3353 3308 2 1139 210 279 29 0 chr15 72712944 72713012 -30781962 + (CAGA)n Simple_repeat Simple_repeat 3 72 0 2 1139 602 222 165 0 chr15 72713817 72714011 -30780963 + L1M2 LINE L1 4398 4623 -1520 2 1139 895 293 147 27 chr15 72714023 72714667 -30780307 - L1MA5A LINE L1 -301 6011 5295 2 1139 1122 208 149 104 chr15 72714728 72715083 -30779891 - ORR1D1 LTR MaLR -2 372 2 2 1139 531 289 12 30 chr15 72716243 72716407 -30778567 + B4 SINE B4 11 171 -121 2 1139 991 188 33 37 chr15 72716512 72716727 -30778247 - B3 SINE B2 -1 215 2 2 1139 1850 276 165 9 chr15 72716768 72717530 -30777444 - L1MA5A LINE L1 -1282 4861 3981 2 1139 23 68 0 0 chr15 72717535 72717579 -30777395 + AT_rich Low_complexity Low_complexity 1 44 0 2 1139 599 306 19 0 chr15 72717681 72717838 -30777136 + RSINE1 SINE B4 4 163 -2 2 1139 545 281 22 0 chr15 72717897 72718036 -30776938 + B1F SINE Alu 1 142 -7 2 1139 183 129 0 0 chr15 72718042 72718073 -30776901 + (GGA)n Simple_repeat Simple_repeat 3 33 0 2 1139 431 237 31 10 chr15 72719063 72719161 -30775813 - B4A SINE B4 -191 101 2 2 1139 299 265 67 29 chr15 72720374 72720479 -30774495 + MLT1A1 LTR MaLR 300 408 0 2 1139 1183 75 0 0 chr15 72720819 72720966 -30774008 + B1_Mus2 SINE Alu 1 147 0 2 1139 238 291 0 37 chr15 72721418 72721500 -30773474 + GA-rich Low_complexity Low_complexity 1 79 0 2 1139 207 333 25 37 chr15 72722427 72722508 -30772466 - L2a LINE L2 -9 3417 3338 2 1139 291 351 11 0 chr15 72722668 72722762 -30772212 - MER5A1 DNA MER1_type -43 123 29 2 1139 1160 119 149 0 chr15 72722845 72723039 -30771935 + URR1A DNA MER1_type 3 225 -1 2 1139 26 0 0 0 chr15 72723213 72723239 -30771735 + AT_rich Low_complexity Low_complexity 1 26 0 2 1139 284 254 62 16 chr15 72723926 72724054 -30770920 + L1MC4 LINE L1 6929 7062 -980 2 1139 1126 288 127 9 chr15 72724407 72724933 -30770041 + Lx8 LINE L1 6886 7473 0 2 1139 368 227 62 18 chr15 72726188 72726300 -30768674 + L1M4 LINE L1 3785 3901 -2245 2 1139 890 142 14 21 chr15 72727991 72728135 -30766839 + B1_Mur4 SINE Alu 8 150 0 2 1139 627 278 96 46 chr15 72728840 72729055 -30765919 + B4A SINE B4 2 227 -65 2 1139 686 312 53 14 chr15 72729055 72729263 -30765711 + B3A SINE B2 1 216 0 2 1139 225 132 0 0 chr15 72729312 72729350 -30765624 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1139 234 262 37 12 chr15 72729688 72729769 -30765205 - MIRb SINE MIR -82 186 104 2 1139 252 298 46 53 chr15 72729867 72729998 -30764976 + MIRc SINE MIR 5 134 -134 2 1139 395 288 31 16 chr15 72730512 72730639 -30764335 + RSINE1 SINE B4 33 161 -4 2 1139 259 352 5 18 chr15 72730995 72731213 -30763761 - L1M5 LINE L1 -2149 3997 3783 2 1139 195 122 40 20 chr15 72731358 72731408 -30763566 + (CAT)n Simple_repeat Simple_repeat 1 51 0 2 1139 440 300 12 75 chr15 72731411 72731584 -30763390 - RSINE1 SINE B4 0 165 4 2 1139 347 295 23 112 chr15 72731823 72732037 -30762937 - L1M5 LINE L1 -2889 3257 3063 2 1139 315 247 13 13 chr15 72732828 72732906 -30762068 - ID4 SINE ID -4 79 2 2 1139 382 188 22 56 chr15 72734775 72734865 -30760109 + HAL1-3A_ME LINE L1 1975 2061 -797 2 1139 429 353 38 6 chr15 72735700 72735857 -30759117 + MLT2B2 LTR ERVL 330 491 -71 3 1139 231 375 28 49 chr15 72735960 72736103 -30758871 - MIRb SINE MIR -93 175 36 3 1139 189 0 0 0 chr15 72736141 72736162 -30758812 + (TA)n Simple_repeat Simple_repeat 2 22 0 3 1139 426 39 0 0 chr15 72736291 72736343 -30758631 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1139 245 292 0 0 chr15 72736946 72737011 -30757963 + (TA)n Simple_repeat Simple_repeat 2 66 0 3 1139 273 324 28 40 chr15 72740102 72740279 -30754695 - L1M5 LINE L1 -1465 4681 4507 3 1139 328 300 128 39 chr15 72740279 72740297 -30754677 + B3A SINE B2 25 49 -149 3 1139 1205 62 0 0 chr15 72740297 72740442 -30754532 + B1_Mus2 SINE Alu 2 146 -1 3 1139 936 109 7 0 chr15 72740442 72740580 -30754394 + B2_Mm1t SINE B2 52 190 -3 3 1139 1969 119 26 67 chr15 72740744 72741086 -30753888 + ORR1A4 LTR MaLR 2 329 0 3 1139 988 119 0 0 chr15 72741762 72741896 -30753078 - B1_Mur3 SINE Alu -13 136 3 3 1139 258 56 0 0 chr15 72741935 72741971 -30753003 + (TTGG)n Simple_repeat Simple_repeat 4 39 0 3 1139 242 106 21 0 chr15 72741977 72742024 -30752950 + (TTTTG)n Simple_repeat Simple_repeat 4 51 0 3 1139 402 329 31 25 chr15 72742338 72742500 -30752474 + MER3 DNA MER1_type 47 209 0 3 1139 242 211 0 55 chr15 72742850 72742905 -30752069 + polypurine Low_complexity Low_complexity 1 52 0 3 1139 924 164 140 11 chr15 72743402 72743581 -30751393 + B3 SINE B2 1 202 -14 3 1139 210 71 0 0 chr15 72744217 72744245 -30750729 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1140 195 257 56 28 chr15 72745817 72745889 -30749085 + MIR SINE MIR 67 140 -122 3 1140 582 15 0 0 chr15 72746494 72746561 -30748413 + (TCCCC)n Simple_repeat Simple_repeat 1 67 0 3 1140 249 33 0 0 chr15 72746689 72746719 -30748255 + (TCTG)n Simple_repeat Simple_repeat 2 31 0 3 1140 468 0 0 0 chr15 72746845 72746897 -30748077 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1140 350 290 18 36 chr15 72747112 72747223 -30747751 - B1_Mur1 SINE Alu -1 148 40 3 1140 806 269 59 11 chr15 72748359 72748630 -30746344 + B4A SINE B4 3 286 -6 3 1140 390 69 0 0 chr15 72748637 72748695 -30746279 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 1140 291 281 85 0 chr15 72748702 72748784 -30746190 + B4A SINE B4 2 90 -202 3 1140 1590 216 94 6 chr15 72748798 72749138 -30745836 + MTD LTR MaLR 8 377 -42 3 1140 1097 209 14 10 chr15 72749190 72749398 -30745576 - B3 SINE B2 -5 211 3 3 1140 454 247 52 0 chr15 72749442 72749539 -30745435 + B4 SINE B4 130 231 -61 3 1140 325 269 10 79 chr15 72749538 72749639 -30745335 + MT2B LTR ERVL 164 257 -344 3 1140 830 172 30 0 chr15 72749550 72749684 -30745290 + B1_Mur1 SINE Alu 12 149 0 3 1140 680 246 42 130 chr15 72749684 72749765 -30745209 + B4 SINE B4 97 292 0 3 1140 317 273 101 8 chr15 72750343 72750472 -30744502 - L1MC4 LINE L1 -4779 1436 1296 3 1140 205 270 0 16 chr15 72750555 72750619 -30744355 + CT-rich Low_complexity Low_complexity 3 65 0 3 1140 394 247 0 58 chr15 72752126 72752229 -30742745 + PB1D10 SINE Alu 13 109 -8 3 1140 214 329 0 67 chr15 72752253 72752328 -30742646 + ID4_ SINE ID 3 72 -11 3 1140 316 284 27 0 chr15 72753317 72753391 -30741583 - ID SINE ID -147 77 2 3 1140 486 326 96 36 chr15 72753622 72753873 -30741101 + MLT1A LTR MaLR 109 374 0 3 1140 316 211 26 13 chr15 72754557 72754634 -30740340 + B4A SINE B4 2 79 -213 3 1140 409 319 145 31 chr15 72755222 72755547 -30739427 + MLT1A0 LTR MaLR 1 390 0 3 1140 456 19 0 0 chr15 72756285 72756338 -30738636 + (GGGGA)n Simple_repeat Simple_repeat 2 54 0 3 1140 288 0 0 0 chr15 72756482 72756514 -30738460 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1140 246 260 108 63 chr15 72758051 72758162 -30736812 + L2c LINE L2 3263 3378 -9 3 1140 21 36 0 0 chr15 72758736 72758764 -30736210 + AT_rich Low_complexity Low_complexity 1 28 0 3 1140 505 190 24 133 chr15 72758788 72758958 -30736016 + B1F SINE Alu 1 149 0 3 1140 341 254 14 0 chr15 72758967 72759038 -30735936 + ID4 SINE ID 1 72 -11 3 1140 207 0 0 0 chr15 72759038 72759061 -30735913 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1140 753 12 0 0 chr15 72759061 72759146 -30735828 + (GA)n Simple_repeat Simple_repeat 2 87 0 3 1140 180 247 31 124 chr15 72760639 72760736 -30734238 - L2 LINE L2 -1233 2186 2099 3 1140 189 244 0 0 chr15 72760878 72760919 -30734055 + MER5B DNA MER1_type 17 57 -121 3 1140 1135 91 0 0 chr15 72761356 72761499 -30733475 - B1_Mus1 SINE Alu -4 144 2 3 1140 350 285 34 116 chr15 72762362 72762509 -30732465 + B4A SINE B4 5 139 -153 3 1140 309 184 54 0 chr15 72762509 72762677 -30732297 + (CAGG)n Simple_repeat Simple_repeat 2 178 0 3 1140 301 256 61 49 chr15 72762763 72762845 -30732129 + RSINE1 SINE B4 83 165 0 3 1140 766 279 0 0 chr15 72762934 72763099 -30731875 + B3A SINE B2 15 179 -19 3 1140 480 18 0 0 chr15 72763109 72763166 -30731808 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1140 203 274 177 0 chr15 72764044 72764106 -30730868 - L2b LINE L2 -34 3341 3269 3 1140 723 231 22 92 chr15 72764785 72765014 -30729960 + B3 SINE B2 4 216 0 3 1140 213 39 0 0 chr15 72765102 72765128 -30729846 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 3 1140 3076 144 16 23 chr15 72765165 72765677 -30729297 - Lx4A LINE L1 -1 7057 6550 3 1140 1016 134 0 0 chr15 72765958 72766100 -30728874 - B1_Mur2 SINE Alu -6 143 2 3 1140 2717 303 35 18 chr15 72766304 72767249 -30727725 + Lx8 LINE L1 6385 7345 -128 3 1140 3174 70 5 0 chr15 72768344 72768741 -30726233 - MTB LTR MaLR -1 399 1 3 1140 651 320 85 15 chr15 72769264 72769974 -30725000 - L1MB8 LINE L1 -290 5888 5120 3 1140 360 0 0 0 chr15 72770137 72770177 -30724797 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1140 1171 283 113 62 chr15 72770515 72771159 -30723815 + Lx9 LINE L1 6959 7635 -9 3 1140 993 80 65 0 chr15 72771219 72771357 -30723617 + B1_Mus2 SINE Alu 1 147 0 3 1140 344 119 17 0 chr15 72771539 72771598 -30723376 + (GAAA)n Simple_repeat Simple_repeat 2 61 0 3 1140 603 74 0 0 chr15 72771598 72771679 -30723295 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 3 1140 429 20 0 0 chr15 72771722 72771772 -30723202 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1140 766 252 145 33 chr15 72771774 72772016 -30722958 - B4A SINE B4 -23 269 1 3 1140 198 0 0 0 chr15 72774100 72774122 -30720852 + (CACCC)n Simple_repeat Simple_repeat 5 26 0 3 1140 1532 214 111 36 chr15 72774805 72775288 -30719686 + RMER4B LTR ERVK 1 451 -15 3 1140 405 0 0 0 chr15 72775289 72775334 -30719640 + (GA)n Simple_repeat Simple_repeat 1 45 0 3 1140 409 259 108 64 chr15 72775666 72775823 -30719151 + RSINE1 SINE B4 2 165 0 3 1140 315 342 71 31 chr15 72777517 72777713 -30717261 + L1MC4a LINE L1 6528 6731 -1151 3 1140 537 226 43 0 chr15 72778075 72778190 -30716784 + PB1D9 SINE Alu 1 120 0 3 1140 1073 110 0 0 chr15 72778490 72778636 -30716338 + B1_Mus1 SINE Alu 2 147 -1 3 1140 264 266 123 26 chr15 72779664 72779856 -30715118 - MIR SINE MIR -71 197 4 3 1140 361 308 58 36 chr15 72780207 72780345 -30714629 - MER45A DNA Tip100 -35 143 3 3 1140 274 167 0 0 chr15 72780467 72780515 -30714459 - RMER30 DNA MER1_type -56 146 99 3 1140 327 78 0 0 chr15 72780515 72780566 -30714408 + (CTTG)n Simple_repeat Simple_repeat 1 51 0 3 1140 431 61 30 0 chr15 72780567 72780633 -30714341 + (GTTTG)n Simple_repeat Simple_repeat 1 68 0 3 1140 233 243 13 39 chr15 72780633 72780710 -30714264 + Charlie12 DNA MER1_type 101 175 -2698 3 1140 338 273 0 0 chr15 72780664 72780741 -30714233 - RMER30 DNA MER1_type -121 81 5 3 1140 461 186 4 4 chr15 72781546 72781633 -30713341 - B1_Mus2 SINE Alu -9 140 54 3 1140 1093 84 0 0 chr15 72781640 72781783 -30713191 + B1_Mus1 SINE Alu 6 148 0 3 1140 34 24 0 0 chr15 72781783 72781824 -30713150 + AT_rich Low_complexity Low_complexity 1 41 0 3 1140 390 219 0 0 chr15 72781835 72781899 -30713075 - PB1D9 SINE Alu -56 64 1 3 1140 665 314 43 6 chr15 72782026 72782241 -30712733 - ID_B1 SINE B4 -46 246 20 3 1140 1017 58 72 7 chr15 72782552 72782690 -30712284 + B1_Mm SINE Alu 1 147 0 3 1140 398 294 42 18 chr15 72782693 72782716 -30712258 - Tigger5 DNA MER2_type -40 2366 2341 3 1140 261 0 0 0 chr15 72782716 72782745 -30712229 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3 1140 440 300 64 0 chr15 72782754 72782894 -30712080 + B1F SINE Alu 1 149 0 3 1140 398 294 42 18 chr15 72782894 72783026 -30711948 - Tigger5 DNA MER2_type -74 2332 2197 3 1140 2498 230 128 17 chr15 72783787 72784512 -30710462 - RLTR40 LTR ERVK -8 809 4 3 1140 428 193 24 12 chr15 72787228 72787312 -30707662 + ID_B1 SINE B4 84 168 -56 3 1140 355 289 290 12 chr15 72787488 72787747 -30707227 + L4 LINE RTE 525 855 -1174 3 1140 5333 49 15 0 chr15 72788142 72788793 -30706181 - L1_Mus2 LINE L1 -1 6565 5905 3 1140 2259 92 13 10 chr15 72788793 72789101 -30705873 + RLTR27 LTR ERVK 1 309 0 3 1140 4659 84 11 0 chr15 72789106 72789758 -30705216 + L1_Mm LINE L1 5225 5883 0 3 1140 388 316 27 86 chr15 72789828 72790015 -30704959 + MTEa LTR MaLR 201 376 -3 3 1140 606 279 76 138 chr15 72790187 72790212 -30704762 + MTE2a LTR MaLR 46 64 -355 3 1140 1107 73 136 24 chr15 72790212 72790381 -30704593 + B2_Mm1t SINE B2 1 188 -5 3 1140 1117 230 62 98 chr15 72790381 72790742 -30704232 + MTE2a LTR MaLR 36 404 -15 3 1140 341 355 0 0 chr15 72791131 72791238 -30703736 + (TGGG)n Simple_repeat Simple_repeat 4 110 0 4 1140 755 209 4 4 chr15 72791243 72791504 -30703470 + (TGGA)n Simple_repeat Simple_repeat 1 261 0 4 1140 196 296 37 74 chr15 72792133 72792268 -30702706 - MIRb SINE MIR -21 247 118 4 1140 323 79 0 113 chr15 72792796 72792867 -30702107 + L1Md_F2 LINE L1 6520 6582 0 4 1140 228 329 14 14 chr15 72792956 72793030 -30701944 + ID4 SINE ID 9 82 -1 4 1140 1010 137 7 0 chr15 72793068 72793214 -30701760 - B1_Mm SINE Alu 0 147 1 4 1140 225 0 0 0 chr15 72794302 72794327 -30700647 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1140 190 241 119 17 chr15 72795013 72795072 -30699902 - L3 LINE CR1 -3656 833 769 4 1140 327 280 36 113 chr15 72795898 72796018 -30698956 + B3A SINE B2 63 187 -11 4 1140 1188 63 0 0 chr15 72796018 72796161 -30698813 + B1_Mus1 SINE Alu 1 143 -5 4 1140 369 0 0 0 chr15 72796161 72796202 -30698772 + (CATA)n Simple_repeat Simple_repeat 2 42 0 4 1140 221 280 35 113 chr15 72796202 72796222 -30698752 + B2_Mm2 SINE B2 174 192 -3 4 1140 332 290 90 0 chr15 72796216 72796316 -30698658 + B4A SINE B4 82 190 -102 4 1140 245 301 12 24 chr15 72796372 72796457 -30698517 + (CA)n Simple_repeat Simple_repeat 2 85 0 4 1140 895 54 62 0 chr15 72796529 72796658 -30698316 + L1Md_F2 LINE L1 6424 6560 -22 4 1140 225 0 0 0 chr15 72796659 72796684 -30698290 + (TAA)n Simple_repeat Simple_repeat 3 27 0 4 1140 301 202 66 22 chr15 72796685 72796776 -30698198 + L1MB1 LINE L1 5821 5915 -253 4 1140 387 333 64 9 chr15 72797175 72797393 -30697581 + L1M5 LINE L1 2640 2869 -3277 4 1140 344 259 12 42 chr15 72797416 72797581 -30697393 + (CA)n Simple_repeat Simple_repeat 2 161 0 4 1140 1598 152 100 45 chr15 72797639 72797817 -30697157 + ORR1C2 LTR MaLR 1 166 -218 4 1140 734 50 10 0 chr15 72797817 72797916 -30697058 + (TCTCCC)n Simple_repeat Simple_repeat 3 102 0 4 1140 1598 152 100 45 chr15 72797916 72798067 -30696907 + ORR1C2 LTR MaLR 167 347 -37 4 1140 1394 261 43 102 chr15 72798133 72798932 -30696042 + Lx8 LINE L1 4810 5628 -528 4 1140 400 260 163 36 chr15 72798946 72799143 -30695831 + Lx8 LINE L1 5720 5976 -1668 4 1140 522 97 0 0 chr15 72799314 72799386 -30695588 + B2_Mm2 SINE B2 40 111 -84 4 1140 324 134 429 24 chr15 72799447 72799531 -30695443 + B2_Mm2 SINE B2 47 164 -31 4 1140 235 226 19 0 chr15 72799555 72799608 -30695366 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 4 1140 2927 270 117 21 chr15 72799608 72800203 -30694771 + Lx8 LINE L1 6190 6836 -637 4 1140 2205 157 44 8 chr15 72800203 72800570 -30694404 - ORR1C2 LTR MaLR 0 384 5 4 1140 2927 270 117 21 chr15 72800570 72801096 -30693878 + Lx8 LINE L1 6837 7418 -55 4 1140 335 262 7 106 chr15 72801265 72801406 -30693568 + RSINE1 SINE B4 19 145 -20 4 1140 405 58 0 0 chr15 72801527 72801579 -30693395 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1140 211 255 0 0 chr15 72801592 72801639 -30693335 - PB1D10 SINE Alu -28 89 43 4 1140 490 223 176 55 chr15 72802317 72802516 -30692458 + ORR1D2 LTR MaLR 5 229 -141 4 1140 258 105 0 0 chr15 72802596 72802634 -30692340 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 1140 208 357 8 30 chr15 72802636 72802769 -30692205 + C-rich Low_complexity Low_complexity 2 131 0 4 1140 247 232 29 14 chr15 72802698 72802768 -30692206 + CT-rich Low_complexity Low_complexity 1 71 0 4 1140 185 220 38 57 chr15 72804540 72804593 -30690381 + MIR3 SINE MIR 134 185 -23 4 1140 432 128 0 0 chr15 72804808 72804886 -30690088 + (TC)n Simple_repeat Simple_repeat 1 78 0 4 1140 255 225 20 0 chr15 72806664 72806730 -30688244 + MLT1B LTR MaLR 40 107 -360 4 1140 732 227 113 5 chr15 72806732 72806918 -30688056 - B3 SINE B2 0 216 11 4 1140 485 309 61 0 chr15 72806929 72807094 -30687880 + MLT1B LTR MaLR 83 257 -133 4 1140 218 327 13 0 chr15 72807131 72807284 -30687690 + (CA)n Simple_repeat Simple_repeat 2 156 0 4 1140 205 339 12 0 chr15 72807809 72807974 -30687000 + (CA)n Simple_repeat Simple_repeat 2 168 0 4 1140 434 301 72 77 chr15 72808167 72808376 -30686598 + MLT1B LTR MaLR 181 388 -2 4 1140 1244 192 38 15 chr15 72808536 72808801 -30686173 + MTEb LTR MaLR 105 375 -4 4 1140 1243 41 0 14 chr15 72809341 72809489 -30685485 - B1_Mus2 SINE Alu -1 146 1 4 1140 842 244 82 122 chr15 72809577 72809742 -30685232 + B4 SINE B4 2 177 -115 4 1140 752 234 43 0 chr15 72809742 72809926 -30685048 + B3A SINE B2 1 192 -6 4 1140 842 244 82 122 chr15 72809926 72810063 -30684911 + B4 SINE B4 178 292 0 4 1140 1671 223 56 21 chr15 72810502 72810878 -30684096 - MTD LTR MaLR 0 419 31 4 1140 212 235 117 48 chr15 72811101 72811204 -30683770 - MIRb SINE MIR -42 226 117 4 1140 2219 53 163 0 chr15 72815551 72815870 -30679104 - MTB LTR MaLR -29 371 1 4 1140 325 212 129 0 chr15 72816014 72816099 -30678875 + L1M LINE L1 5334 5429 -811 4 1140 727 240 143 15 chr15 72816353 72816556 -30678418 + B4 SINE B4 1 229 -63 4 1140 3110 174 47 33 chr15 72817990 72818711 -30676263 + Lx7 LINE L1 438 1168 -6560 4 1140 902 171 27 0 chr15 72818726 72818872 -30676102 + B1_Mur4 SINE Alu 1 150 0 4 1140 289 176 27 0 chr15 72818880 72818954 -30676020 + GA-rich Low_complexity Low_complexity 1 76 0 4 1140 2817 159 186 6 chr15 72818954 72819408 -30675566 + Lx7 LINE L1 1488 1994 -3886 4 1140 306 0 0 0 chr15 72819408 72819442 -30675532 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1140 2817 159 186 6 chr15 72819442 72819664 -30675310 + Lx7 LINE L1 1995 2285 -3595 4 1140 310 164 0 0 chr15 72819664 72819719 -30675255 - ORR1B2 LTR MaLR 0 394 340 4 1140 430 105 0 12 chr15 72819715 72819828 -30675146 - B2_Mm2 SINE B2 -1 194 47 4 1140 221 208 42 0 chr15 72819785 72819833 -30675141 - B4A SINE B4 -202 90 41 4 1140 1287 86 17 0 chr15 72819855 72820030 -30674944 - B2_Mm1t SINE B2 -14 179 2 4 1140 2331 42 3 24 chr15 72820053 72820347 -30674627 - L1_Mus1 LINE L1 -1 6566 6279 4 1140 1537 147 134 17 chr15 72820347 72820638 -30674336 - ORR1B2 LTR MaLR -42 325 1 4 1140 738 129 8 0 chr15 72820645 72820769 -30674205 + Lx7 LINE L1 2292 2416 -3464 4 1140 1708 219 52 34 chr15 72820784 72821229 -30673745 - RMER1C Other Other 0 1342 890 4 1140 6958 161 70 165 chr15 72821482 72821875 -30673099 + Lx7 LINE L1 2395 2792 -3088 4 1140 282 29 0 0 chr15 72821875 72821910 -30673064 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1140 6958 160 70 165 chr15 72821910 72821976 -30672998 + Lx7 LINE L1 2793 2850 -3030 4 1140 432 194 51 51 chr15 72821976 72822074 -30672900 + B1_Mur4 SINE Alu 41 138 -12 4 1140 6958 160 70 165 chr15 72822074 72822423 -30672551 + Lx7 LINE L1 2851 3160 -2720 4 1140 885 63 0 0 chr15 72822423 72822534 -30672440 + B2_Mm2 SINE B2 2 112 -83 4 1140 6958 160 70 165 chr15 72822534 72822608 -30672366 + Lx7 LINE L1 3161 3229 -2651 4 1140 1088 82 7 0 chr15 72822608 72822754 -30672220 + B1_Mus1 SINE Alu 2 148 0 4 1140 6958 160 70 165 chr15 72822754 72822769 -30672205 + L1_Mur3 LINE L1 3230 3230 -2650 4 1140 216 0 0 0 chr15 72822769 72822793 -30672181 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 4 1140 6958 160 70 165 chr15 72822793 72822948 -30672026 + L1_Mur3 LINE L1 3230 3367 -2513 4 1140 1237 121 10 16 chr15 72822948 72823141 -30671833 - B2_Mm1t SINE B2 0 193 2 4 1140 6958 160 70 165 chr15 72823141 72823748 -30671226 + L1_Mur3 LINE L1 3368 3993 -1887 4 1140 1979 125 156 0 chr15 72823748 72824100 -30670874 - MTB_Mm LTR MaLR 0 407 1 4 1140 6958 176 70 177 chr15 72824100 72824704 -30670270 + Lx7 LINE L1 3993 4643 -1234 4 1140 779 276 49 45 chr15 72824704 72824861 -30670113 + RLTR17 LTR ERVK 102 260 -432 4 1140 3419 33 5 0 chr15 72824861 72825255 -30669719 + MTA_Mm LTR MaLR 1 396 0 4 1140 779 276 49 45 chr15 72825255 72825363 -30669611 + RLTR17 LTR ERVK 261 368 -324 4 1140 4553 230 70 216 chr15 72825363 72825930 -30669044 + Lx7 LINE L1 4644 5251 -626 4 1140 968 140 0 14 chr15 72825930 72826075 -30668899 + B1_Mus1 SINE Alu 6 148 0 4 1140 4553 230 70 216 chr15 72826075 72826090 -30668884 + Lx7 LINE L1 5252 5269 -608 4 1140 249 33 0 0 chr15 72826090 72826120 -30668854 + (GGGA)n Simple_repeat Simple_repeat 4 33 0 4 1140 4553 203 70 120 chr15 72826120 72826772 -30668202 + Lx7 LINE L1 5270 5940 -1756 4 1140 305 216 5 59 chr15 72828449 72828636 -30666338 + (CACAG)n Simple_repeat Simple_repeat 1 177 0 4 1140 1382 63 15 73 chr15 72829130 72829336 -30665638 + B2_Mm2 SINE B2 2 195 0 4 1140 1769 160 223 31 chr15 72829517 72829997 -30664977 + RLTR17 LTR ERVK 122 692 0 4 1140 498 261 94 67 chr15 72829997 72830242 -30664732 + ORR1E LTR MaLR 103 374 -5 4 1140 302 256 13 0 chr15 72830783 72830861 -30664113 + ID4 SINE ID 5 83 0 4 1140 1993 30 42 0 chr15 72831506 72831743 -30663231 - L1_Mus1 LINE L1 0 6567 6321 4 1140 880 238 10 21 chr15 72831808 72831833 -30663141 - B3 SINE B2 -25 191 170 4 1140 405 0 0 0 chr15 72831833 72831878 -30663096 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1140 880 238 10 21 chr15 72831878 72832045 -30662929 - B3 SINE B2 -47 169 2 4 1140 2108 302 104 29 chr15 72832082 72833520 -30661454 - Lx7 LINE L1 -1597 6099 4537 4 1140 202 400 27 0 chr15 72834571 72834646 -30660328 + L2b LINE L2 3274 3350 -25 4 1140 195 300 28 14 chr15 72836854 72836925 -30658049 - MIR SINE MIR -141 121 50 4 1140 480 332 52 70 chr15 72837333 72837887 -30657087 + L1MC1 LINE L1 4726 5269 -877 4 1140 213 39 0 0 chr15 72837897 72837923 -30657051 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 4 1140 536 273 98 58 chr15 72837944 72838083 -30656891 + L1MC1 LINE L1 5348 5480 -864 4 1140 3162 44 36 8 chr15 72838083 72838470 -30656504 + MTB LTR MaLR 3 400 0 4 1140 536 275 111 61 chr15 72838470 72838671 -30656303 + L1MC1 LINE L1 5481 5712 -621 4 1140 581 286 89 14 chr15 72838709 72839000 -30655974 + L1MC1 LINE L1 5923 6235 -98 4 1140 870 234 28 38 chr15 72839074 72839287 -30655687 - B3 SINE B2 -5 211 1 4 1140 676 244 32 6 chr15 72839381 72839538 -30655436 + RSINE1 SINE B4 5 165 0 4 1140 519 290 58 0 chr15 72840984 72841139 -30653835 + RSINE1 SINE B4 2 165 0 4 1140 257 255 130 68 chr15 72841139 72841161 -30653813 + B2_Mm2 SINE B2 1 188 -7 4 1140 397 227 80 0 chr15 72841225 72841313 -30653661 + B1F SINE Alu 55 149 0 4 1140 233 300 34 76 chr15 72841351 72841470 -30653504 + L3 LINE CR1 3709 3822 -667 4 1140 290 250 204 0 chr15 72842247 72842335 -30652639 - PB1D7 SINE Alu -11 109 4 4 1140 391 125 29 59 chr15 72843987 72844055 -30650919 + RMER15 LTR ERVL 3 68 -507 4 1140 1107 92 0 0 chr15 72844059 72844201 -30650773 + B1_Mus1 SINE Alu 7 148 0 4 1140 2122 143 204 36 chr15 72844212 72844654 -30650320 + RMER15 LTR ERVL 58 573 -2 4 1140 273 238 111 0 chr15 72845105 72845168 -30649806 + MLT1A0 LTR MaLR 83 152 -213 4 1140 435 282 52 44 chr15 72845889 72846225 -30648749 - L1M5 LINE L1 -1019 5425 5084 4 1140 862 232 0 37 chr15 72847391 72847579 -30647395 - B3A SINE B2 -17 181 1 4 1140 274 308 41 41 chr15 72847817 72847939 -30647035 + PB1 SINE Alu 1 122 -5 4 1140 322 327 0 18 chr15 72848412 72848521 -30646453 + G-rich Low_complexity Low_complexity 2 108 0 4 1140 473 262 74 0 chr15 72848608 72848730 -30646244 - B1F1 SINE Alu -11 138 8 4 1140 603 229 0 31 chr15 72848730 72848892 -30646082 + L1M4 LINE L1 4543 4699 -1447 5 1140 608 239 51 0 chr15 72848925 72849063 -30645911 + B1F2 SINE Alu 4 148 -1 5 1140 243 315 0 0 chr15 72849442 72849496 -30645478 + tRNA-Ala-GCY_ tRNA tRNA 15 68 -7 5 1140 340 296 163 39 chr15 72849524 72849855 -30645119 + L1M4 LINE L1 5353 5724 -454 5 1140 600 40 0 0 chr15 72849855 72849930 -30645044 + (GGA)n Simple_repeat Simple_repeat 3 77 0 5 1140 289 361 37 49 chr15 72850602 72850847 -30644127 - L4 LINE RTE -3 2026 1785 5 1140 901 122 14 21 chr15 72853024 72853167 -30641807 - B1_Mur4 SINE Alu 0 150 9 5 1140 495 245 64 117 chr15 72853031 72853202 -30641772 - B4 SINE B4 -73 219 58 5 1140 438 233 68 0 chr15 72854295 72854398 -30640576 + RSINE1 SINE B4 1 110 -55 5 1140 288 0 0 0 chr15 72854398 72854430 -30640544 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1140 502 173 35 35 chr15 72854880 72854994 -30639980 - B3A SINE B2 -84 114 1 5 1140 893 100 240 0 chr15 72856122 72856272 -30638702 + B2_Mm1t SINE B2 1 186 -7 5 1140 258 167 0 0 chr15 72856999 72857059 -30637915 + T-rich Low_complexity Low_complexity 1 60 0 5 1140 819 145 20 46 chr15 72857060 72857212 -30637762 - B1_Mur3 SINE Alu -1 148 1 5 1140 1006 66 66 0 chr15 72858635 72858771 -30636203 + B1_Mus1 SINE Alu 2 146 -2 5 1140 348 335 74 62 chr15 72858811 72858973 -30636001 + RSINE1 SINE B4 2 165 0 5 1140 381 216 0 0 chr15 72858973 72859061 -30635913 + (TA)n Simple_repeat Simple_repeat 1 88 0 5 1140 779 181 28 0 chr15 72859482 72859626 -30635348 + B1_Mur4 SINE Alu 1 148 -2 5 1140 471 145 157 0 chr15 72859816 72859899 -30635075 + B1_Mur1 SINE Alu 41 136 -13 5 1140 324 0 0 0 chr15 72860305 72860341 -30634633 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 1140 297 0 0 0 chr15 72860341 72860373 -30634601 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 1140 605 236 38 114 chr15 72860405 72860615 -30634359 + B3 SINE B2 2 198 0 5 1140 22 0 0 0 chr15 72860860 72860882 -30634092 + AT_rich Low_complexity Low_complexity 1 22 0 5 1140 1077 191 46 90 chr15 72861059 72861509 -30633465 + MTC LTR MaLR 1 419 0 5 1140 414 280 96 0 chr15 72861705 72861830 -30633144 + RSINE1 SINE B4 4 140 -25 5 1140 443 298 86 7 chr15 72864503 72864655 -30630319 + RSINE1 SINE B4 2 165 0 5 1140 287 330 87 0 chr15 72864698 72864813 -30630161 + ID_B1 SINE B4 95 219 -5 5 1140 252 122 0 0 chr15 72864815 72864856 -30630118 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 5 1140 1015 8 0 0 chr15 72864912 72865037 -30629937 + L1Md_T LINE L1 6458 6582 0 5 1140 369 0 0 0 chr15 72865578 72865619 -30629355 + (TTAAA)n Simple_repeat Simple_repeat 2 42 0 5 1140 352 262 206 27 chr15 72865641 72866049 -30628925 + L1MB8 LINE L1 2825 3305 -2841 5 1140 294 238 55 17 chr15 72866042 72866187 -30628787 + L1MA4A LINE L1 5815 5964 -327 5 1140 264 100 0 0 chr15 72866211 72866251 -30628723 + (CAGG)n Simple_repeat Simple_repeat 1 40 0 5 1140 186 71 0 0 chr15 72866408 72866436 -30628538 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1140 1161 61 0 58 chr15 72866436 72866592 -30628382 + B1_Mm SINE Alu 1 147 0 5 1140 252 59 0 0 chr15 72866592 72866626 -30628348 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 1140 243 0 0 0 chr15 72866713 72866740 -30628234 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1140 494 117 0 49 chr15 72866741 72866822 -30628152 - B1_Mm SINE Alu -12 135 59 5 1140 339 233 142 0 chr15 72866840 72866960 -30628014 + L1MB8 LINE L1 3283 3419 -2727 5 1140 405 295 305 54 chr15 72867103 72867515 -30627459 + L1MB8 LINE L1 3889 4411 -1735 5 1140 664 193 187 0 chr15 72867515 72867681 -30627293 + B3A SINE B2 2 198 0 5 1140 405 307 141 60 chr15 72867681 72867810 -30627164 + L1MB8 LINE L1 4412 4544 -1602 5 1140 321 312 9 44 chr15 72867793 72867907 -30627067 + L1MC4a LINE L1 6570 6679 -1203 5 1140 390 159 0 0 chr15 72867918 72867987 -30626987 + (TA)n Simple_repeat Simple_repeat 2 70 0 5 1140 659 309 6 28 chr15 72868028 72868208 -30626766 - B3A SINE B2 -8 190 15 5 1140 576 201 32 45 chr15 72868210 72868366 -30626608 + L1MB8 LINE L1 4531 4684 -1462 5 1140 273 261 0 0 chr15 72869209 72869278 -30625696 + L1MB8 LINE L1 5227 5295 -851 5 1140 536 324 66 24 chr15 72869297 72869817 -30625157 + L1MB8 LINE L1 5347 5898 -280 5 1140 1214 14 7 39 chr15 72869817 72869970 -30625004 + B1_Mus1 SINE Alu 1 148 0 5 1140 658 310 2 7 chr15 72871264 72871469 -30623505 - B3A SINE B2 -10 206 1 5 1140 225 94 0 0 chr15 72871472 72871504 -30623470 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 5 1140 386 213 165 31 chr15 72871516 72871613 -30623361 - PB1D10 SINE Alu -7 110 1 5 1140 414 198 165 0 chr15 72872100 72872191 -30622783 + PB1D7 SINE Alu 4 109 -11 5 1140 23 0 0 0 chr15 72872552 72872575 -30622399 + AT_rich Low_complexity Low_complexity 1 23 0 5 1140 282 196 0 0 chr15 72873029 72873126 -30621848 + (TCTG)n Simple_repeat Simple_repeat 4 100 0 5 1140 222 136 0 0 chr15 72873138 72873182 -30621792 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 1140 937 244 50 0 chr15 72873245 72873446 -30621528 + ID_B1 SINE B4 5 215 -9 5 1140 726 242 94 0 chr15 72873456 72873605 -30621369 + B3A SINE B2 1 163 -35 5 1140 450 53 0 0 chr15 72873610 72873667 -30621307 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1140 381 250 0 0 chr15 72873684 72873752 -30621222 - PB1D9 SINE Alu -52 68 1 5 1140 1130 76 14 0 chr15 72873799 72873944 -30621030 + B1_Mus1 SINE Alu 2 148 0 5 1140 227 305 19 112 chr15 72874023 72874130 -30620844 - PB1D10 SINE Alu 0 117 21 5 1140 1517 68 5 15 chr15 72874174 72874369 -30620605 - B2_Mm2 SINE B2 -2 193 1 5 1140 369 253 31 10 chr15 72874461 72874557 -30620417 + PB1D10 SINE Alu 3 100 -17 5 1140 225 0 0 0 chr15 72875067 72875092 -30619882 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1140 384 271 252 25 chr15 72875376 72875535 -30619439 + B3A SINE B2 1 195 -3 5 1140 609 183 0 0 chr15 72875538 72875631 -30619343 + B2_Mm2 SINE B2 1 93 -102 5 1140 578 231 6 70 chr15 72875664 72875822 -30619152 + B1F2 SINE Alu 1 148 -1 5 1141 210 167 24 0 chr15 72876096 72876117 -30618857 + T-rich Low_complexity Low_complexity 24 45 0 5 1141 1467 83 5 0 chr15 72876117 72876309 -30618665 - B2_Mm1t SINE B2 0 193 1 5 1141 210 167 24 0 chr15 72876309 72876329 -30618645 + T-rich Low_complexity Low_complexity 4 23 0 5 1141 975 127 0 0 chr15 72876330 72876472 -30618502 - B1_Mus1 SINE Alu -6 142 1 5 1141 231 236 0 18 chr15 72876722 72876778 -30618196 - ID4_ SINE ID -22 61 7 5 1141 243 0 0 0 chr15 72876786 72876813 -30618161 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 5 1141 404 262 0 0 chr15 72876813 72876893 -30618081 - ID_B1 SINE B4 -9 215 136 5 1141 242 237 62 107 chr15 72876893 72876928 -30618046 - PB1 SINE Alu -8 119 1 5 1141 23 55 0 18 chr15 72877078 72877116 -30617858 + AT_rich Low_complexity Low_complexity 1 38 0 5 1141 1513 53 0 36 chr15 72877116 72877311 -30617663 - B2_Mm1a SINE B2 -4 189 2 5 1141 23 55 0 18 chr15 72877311 72877327 -30617647 + AT_rich Low_complexity Low_complexity 1 16 0 5 1141 541 298 56 77 chr15 72877417 72877585 -30617389 + B3A SINE B2 1 169 -26 5 1141 228 67 0 0 chr15 72877585 72877615 -30617359 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 1141 358 298 56 77 chr15 72877615 72877642 -30617332 + B2_Mm2 SINE B2 170 192 -3 5 1141 1464 44 44 6 chr15 72877656 72877837 -30617137 + B2_Mm2 SINE B2 1 188 -7 5 1141 685 268 266 22 chr15 72878023 72878301 -30616673 + MTE2a LTR MaLR 32 377 -2 5 1141 1488 53 26 0 chr15 72878356 72878546 -30616428 + B2_Mm2 SINE B2 1 195 0 5 1141 327 65 0 0 chr15 72878610 72878656 -30616318 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1141 538 189 88 26 chr15 72878664 72878778 -30616196 - RSINE1 SINE B4 -42 123 3 5 1141 624 206 0 0 chr15 72878785 72878892 -30616082 - B1F SINE Alu -6 143 37 5 1141 1481 241 81 16 chr15 72879785 72880216 -30614758 + RMER5 LTR ERV1 37 495 -39 5 1141 901 174 0 0 chr15 72880220 72880358 -30614616 + B1_Mus2 SINE Alu 2 139 -8 5 1141 595 213 94 47 chr15 72881279 72881407 -30613567 + B1_Mur1 SINE Alu 1 134 -15 5 1141 716 264 0 7 chr15 72881614 72881763 -30613211 - RSINE1 SINE B4 -17 148 1 5 1141 221 294 0 0 chr15 72881934 72881985 -30612989 + polypurine Low_complexity Low_complexity 2 52 0 5 1141 872 105 128 0 chr15 72882004 72882137 -30612837 + B1_Mur4 SINE Alu 1 150 0 5 1141 437 219 29 35 chr15 72883612 72883740 -30611234 + B3A SINE B2 40 169 -47 5 1141 247 312 117 11 chr15 72883980 72884074 -30610900 + MIR3 SINE MIR 5 108 -100 5 1141 186 43 0 0 chr15 72884353 72884376 -30610598 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 5 1141 397 279 92 15 chr15 72887610 72887755 -30607219 - B1F SINE Alu 0 150 1 5 1141 842 211 75 38 chr15 72887785 72887997 -30606977 + ID_B1 SINE B4 2 221 -3 5 1141 232 225 81 40 chr15 72889443 72889517 -30605457 + B1F SINE Alu 73 149 0 5 1141 641 226 0 16 chr15 72889525 72889651 -30605323 + B1_Mur1 SINE Alu 21 144 -5 5 1141 189 0 0 0 chr15 72889673 72889694 -30605280 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 5 1141 1385 57 17 11 chr15 72889735 72889912 -30605062 + B2_Mm2 SINE B2 1 178 -17 5 1141 766 85 244 8 chr15 72889912 72890031 -30604943 + B1_Mus1 SINE Alu 1 147 -1 5 1141 368 241 98 23 chr15 72890043 72890217 -30604757 - L1MB3 LINE L1 -15 6168 5982 5 1141 240 248 84 56 chr15 72890275 72890382 -30604592 - B3A SINE B2 -88 110 1 5 1141 234 91 0 0 chr15 72890463 72890496 -30604478 + (T)n Simple_repeat Simple_repeat 1 33 0 5 1141 311 282 0 63 chr15 72891556 72891730 -30603244 + GA-rich Low_complexity Low_complexity 1 163 0 5 1141 318 115 0 0 chr15 72891844 72891905 -30603069 + (TC)n Simple_repeat Simple_repeat 2 62 0 6 1141 396 0 0 0 chr15 72891905 72891949 -30603025 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1141 379 191 170 0 chr15 72892115 72892209 -30602765 + PB1D9 SINE Alu 9 118 -2 6 1141 228 135 0 0 chr15 72892321 72892358 -30602616 + (TCC)n Simple_repeat Simple_repeat 3 39 0 6 1141 936 188 0 0 chr15 72892377 72892526 -30602448 - B1_Mur3 SINE Alu 0 149 1 6 1141 279 0 0 0 chr15 72892645 72892676 -30602298 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1141 261 229 0 0 chr15 72893330 72893400 -30601574 + T-rich Low_complexity Low_complexity 4 73 0 6 1141 845 156 0 7 chr15 72893418 72893560 -30601414 - B1_Mus1 SINE Alu -2 146 6 6 1141 467 271 95 101 chr15 72893421 72893610 -30601364 - B4 SINE B4 -71 221 34 6 1141 673 212 0 0 chr15 72893621 72893739 -30601235 - B1_Mur2 SINE Alu -26 123 6 6 1141 244 325 60 12 chr15 72894117 72894201 -30600773 - MLT1A0 LTR MaLR -8 459 372 6 1141 1255 48 0 0 chr15 72894399 72894546 -30600428 + B1_Mus2 SINE Alu 1 147 0 6 1141 223 26 24 49 chr15 72894549 72894590 -30600384 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 6 1141 1050 57 34 41 chr15 72894600 72894746 -30600228 + B1_Mus2 SINE Alu 2 146 -1 6 1141 598 259 69 9 chr15 72895125 72895343 -30599631 - MLT1A0 LTR MaLR -134 231 1 6 1141 475 279 92 79 chr15 72895466 72895495 -30599479 + RSINE1 SINE B4 12 34 -131 6 1141 206 0 69 0 chr15 72895495 72895524 -30599450 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1141 475 279 92 79 chr15 72895524 72895646 -30599328 + RSINE1 SINE B4 35 165 0 6 1141 24 67 0 0 chr15 72895664 72895709 -30599265 + AT_rich Low_complexity Low_complexity 1 45 0 6 1141 1270 35 0 0 chr15 72896026 72896171 -30598803 - B1_Mus2 SINE Alu 0 147 3 6 1141 798 265 104 64 chr15 72896280 72896530 -30598444 + B4A SINE B4 33 292 0 6 1141 1023 116 0 13 chr15 72896879 72897036 -30597938 + Lx4A LINE L1 6631 6785 -273 6 1141 594 259 63 29 chr15 72897038 72897213 -30597761 + B3A SINE B2 5 185 -13 6 1141 432 272 230 6 chr15 72897234 72897408 -30597566 - ID_B1 SINE B4 -9 215 3 6 1141 227 31 0 30 chr15 72897775 72897808 -30597166 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 6 1141 24 32 0 0 chr15 72898096 72898127 -30596847 + GC_rich Low_complexity Low_complexity 1 31 0 6 1141 786 262 54 5 chr15 72898445 72898648 -30596326 - ID_B1 SINE B4 0 224 12 6 1141 787 182 15 0 chr15 72898832 72898964 -30596010 + B1_Mus2 SINE Alu 1 134 -13 6 1141 308 306 46 0 chr15 72899693 72899801 -30595173 + PB1D9 SINE Alu 3 115 -5 6 1141 39 38 0 0 chr15 72899845 72899898 -30595076 + AT_rich Low_complexity Low_complexity 1 53 0 6 1141 217 228 90 90 chr15 72899993 72900036 -30594938 - B2_Mm2 SINE B2 -1 194 152 6 1141 354 327 17 62 chr15 72900036 72900165 -30594809 + PB1D9 SINE Alu 3 127 -21 6 1141 277 330 19 76 chr15 72900197 72900302 -30594672 + PB1D10 SINE Alu 14 112 -5 6 1141 419 312 74 12 chr15 72900422 72900584 -30594390 + B4A SINE B4 109 280 -12 6 1141 230 318 23 0 chr15 72900598 72900686 -30594288 + (CA)n Simple_repeat Simple_repeat 2 91 0 6 1141 572 292 94 31 chr15 72900722 72900892 -30594082 + B4A SINE B4 1 182 -110 6 1141 1894 103 112 13 chr15 72900892 72901226 -30593748 - RMER16 LTR ERVK 0 533 1 6 1141 471 141 0 0 chr15 72901266 72901358 -30593616 + (CA)n Simple_repeat Simple_repeat 2 93 0 6 1141 581 252 72 0 chr15 72901395 72901534 -30593440 + RSINE1 SINE B4 17 165 0 6 1141 258 275 38 0 chr15 72901572 72901652 -30593322 + ID4_ SINE ID 1 83 0 6 1141 5137 144 93 10 chr15 72901751 72902625 -30592349 - Lx4A LINE L1 0 7058 6113 6 1141 454 57 0 2 chr15 72902625 72902692 -30592282 + L1_Mur2 LINE L1 2633 2708 -3172 6 1141 927 253 110 49 chr15 72902853 72903198 -30591776 - MTD LTR MaLR -1 418 53 6 1141 241 241 0 0 chr15 72903410 72903464 -30591510 + L1ME2 LINE L1 5468 5521 -641 6 1141 1224 54 0 0 chr15 72903512 72903659 -30591315 + B1_Mus2 SINE Alu 1 147 0 6 1141 247 196 0 0 chr15 72903663 72903719 -30591255 + A-rich Low_complexity Low_complexity 1 56 0 6 1141 320 339 93 42 chr15 72903897 72904230 -30590744 + L1ME2 LINE L1 5796 6145 -19 6 1141 308 283 11 32 chr15 72904242 72904337 -30590637 + PB1D10 SINE Alu 2 94 -23 6 1141 506 282 224 5 chr15 72904601 72904815 -30590159 + B4A SINE B4 1 261 -31 6 1141 378 256 48 24 chr15 72904992 72905116 -30589858 - PB1 SINE Alu 0 127 1 6 1141 461 300 0 0 chr15 72905197 72905317 -30589657 + PB1D7 SINE Alu 1 120 0 6 1141 186 43 0 0 chr15 72905350 72905373 -30589601 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 6 1141 1257 48 0 0 chr15 72905373 72905519 -30589455 - B1_Mus1 SINE Alu -2 146 1 6 1141 653 114 9 19 chr15 72905669 72905776 -30589198 - B1_Mus2 SINE Alu 0 147 42 6 1141 571 230 15 15 chr15 72905827 72905964 -30589010 + ORR1C2 LTR MaLR 1 137 -247 6 1141 636 197 76 17 chr15 72905953 72906072 -30588902 + B1_Mus1 SINE Alu 6 131 -17 6 1141 252 250 0 19 chr15 72906077 72906130 -30588844 - RSINE1 SINE B4 -112 53 2 6 1141 416 239 113 50 chr15 72906140 72906281 -30588693 - ID_B1 SINE B4 -8 216 67 6 1141 341 264 53 62 chr15 72906564 72906677 -30588297 - PB1D9 SINE Alu -6 114 3 6 1141 597 247 25 31 chr15 72906758 72906921 -30588053 - RSINE1 SINE B4 0 165 4 6 1141 378 42 0 0 chr15 72906980 72907028 -30587946 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1141 780 276 55 114 chr15 72907617 72907831 -30587143 + B4A SINE B4 1 228 -64 6 1141 1200 37 0 0 chr15 72907831 72907966 -30587008 + B1_Mus1 SINE Alu 2 136 -12 6 1141 207 0 0 0 chr15 72907967 72907990 -30586984 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 6 1141 780 276 55 114 chr15 72907990 72908014 -30586960 + B4A SINE B4 229 229 -63 6 1141 1668 37 0 0 chr15 72908014 72908204 -30586770 + B2_Mm1a SINE B2 2 191 -2 6 1141 780 276 55 114 chr15 72908204 72908269 -30586705 + B4A SINE B4 229 289 -3 6 1141 213 154 0 0 chr15 72908315 72908354 -30586620 + (TAAA)n Simple_repeat Simple_repeat 4 42 0 6 1141 775 185 7 15 chr15 72908558 72908695 -30586279 - B1_Mus1 SINE Alu 0 148 13 6 1141 457 259 54 0 chr15 72908800 72908912 -30586062 + PB1 SINE Alu 1 118 -9 6 1141 1621 192 117 9 chr15 72908927 72909269 -30585705 - MTD LTR MaLR 0 419 41 6 1141 985 271 93 44 chr15 72909362 72909732 -30585242 - MTD LTR MaLR -15 404 10 6 1141 1057 77 0 65 chr15 72910328 72910471 -30584503 + B1_Mus1 SINE Alu 1 135 -13 6 1141 255 31 0 0 chr15 72910471 72910503 -30584471 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 6 1141 1206 68 7 0 chr15 72910943 72911089 -30583885 + B1_Mm SINE Alu 1 147 0 6 1141 1776 124 39 20 chr15 72911113 72911343 -30583631 + RLTR15 LTR ERVK 49 283 -76 6 1141 441 0 0 0 chr15 72911343 72911392 -30583582 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1141 1776 124 39 20 chr15 72911392 72911466 -30583508 + RLTR15 LTR ERVK 284 359 0 6 1141 540 287 122 6 chr15 72911527 72911699 -30583275 + MTE2b LTR MaLR 170 361 -18 6 1141 3170 8 43 0 chr15 72911841 72912193 -30582781 - IAPLTR1_Mm LTR ERVK 0 367 1 6 1141 14450 22 1 4 chr15 72912193 72913896 -30581078 - IAPEz-int LTR ERVK 0 6481 4784 6 1141 34695 26 22 2 chr15 72913891 72918030 -30576944 - IAPEz-int LTR ERVK -2252 4229 8 6 1141 3145 11 43 0 chr15 72918030 72918382 -30576592 - IAPLTR1_Mm LTR ERVK 0 367 1 6 1141 794 172 14 29 chr15 72918615 72918773 -30576201 + B1_Mur3 SINE Alu 3 150 0 6 1141 311 292 177 0 chr15 72919611 72919661 -30575313 + MER2 DNA MER2_type 21 70 -275 6 1141 228 35 0 0 chr15 72919661 72919690 -30575284 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 6 1141 311 292 177 0 chr15 72919690 72919769 -30575205 + MER2 DNA MER2_type 71 172 -173 6 1141 968 62 100 0 chr15 72919857 72919987 -30574987 + B1_Mm SINE Alu 2 144 -3 6 1141 207 0 0 0 chr15 72920000 72920023 -30574951 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1141 302 273 25 38 chr15 72920023 72920103 -30574871 + MER2 DNA MER2_type 267 345 0 6 1141 217 218 192 0 chr15 72920411 72920489 -30574485 - PB1D7 SINE Alu -5 115 23 6 1141 482 212 55 58 chr15 72921529 72921680 -30573294 - B1_Mur2 SINE Alu 0 149 2 6 1141 249 309 13 134 chr15 72921680 72921749 -30573225 - MT2B2 LTR ERVL -432 152 103 6 1141 225 0 0 0 chr15 72921859 72921884 -30573090 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1141 231 292 104 0 chr15 72922003 72922099 -30572875 - MER2B DNA MER2_type -46 290 185 6 1141 1237 54 0 0 chr15 72922107 72922254 -30572720 + B1_Mus1 SINE Alu 2 148 0 6 1141 180 0 0 0 chr15 72922270 72922290 -30572684 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 1141 910 128 43 0 chr15 72922687 72922828 -30572146 - B1_Mus1 SINE Alu 0 148 2 6 1141 191 32 65 0 chr15 72923415 72923446 -30571528 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 6 1141 180 259 18 36 chr15 72924166 72924222 -30570752 + L4 LINE RTE 621 675 -1354 6 1141 1852 153 109 20 chr15 72924751 72925109 -30569865 - MTB_Mm LTR MaLR -27 380 1 6 1141 336 252 108 29 chr15 72925217 72925325 -30569649 - PB1D10 SINE Alu -1 116 1 6 1141 616 131 54 36 chr15 72925443 72925554 -30569420 - B1_Mur1 SINE Alu -16 133 21 6 1141 311 269 27 161 chr15 72925445 72925631 -30569343 - MT2B LTR ERVL -324 277 117 6 1141 180 0 0 0 chr15 72926295 72926315 -30568659 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 6 1141 268 233 0 0 chr15 72927076 72927136 -30567838 + A-rich Low_complexity Low_complexity 1 60 0 6 1141 198 0 0 0 chr15 72928860 72928882 -30566092 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1141 22 0 0 0 chr15 72929038 72929060 -30565914 + AT_rich Low_complexity Low_complexity 1 22 0 6 1141 26 0 0 0 chr15 72929422 72929448 -30565526 + AT_rich Low_complexity Low_complexity 1 26 0 6 1141 363 44 0 0 chr15 72932308 72932353 -30562621 + (TCTG)n Simple_repeat Simple_repeat 3 47 0 6 1141 286 196 20 15 chr15 72937861 72937922 -30557052 + B1F1 SINE Alu 1 47 -102 6 1141 381 43 0 0 chr15 72937922 72937969 -30557005 + (TCCC)n Simple_repeat Simple_repeat 2 48 0 7 1141 254 284 88 66 chr15 72937969 72938046 -30556928 + FAM SINE Alu 203 277 -34 6 1141 249 199 207 60 chr15 72938062 72938212 -30556762 + L1MA5 LINE L1 6124 6295 -5 7 1141 226 274 112 107 chr15 72938842 72939075 -30555899 - LTRIS_Mus LTR ERV1 -295 292 59 7 1141 355 302 58 16 chr15 72939082 72939203 -30555771 - ID_B1 SINE B4 -9 215 90 7 1141 253 243 54 45 chr15 72939224 72939336 -30555638 - RMER17D2 LTR ERVK -457 352 240 7 1141 489 245 70 21 chr15 72939368 72939510 -30555464 - B1F SINE Alu 0 149 1 7 1141 272 352 9 61 chr15 72939797 72939912 -30555062 - PB1D10 SINE Alu 0 117 9 7 1141 498 246 34 68 chr15 72939992 72940140 -30554834 + B3A SINE B2 1 143 -55 7 1141 653 283 28 28 chr15 72941355 72941533 -30553441 + B4 SINE B4 1 178 -114 7 1141 240 284 21 64 chr15 72941770 72941864 -30553110 - PB1D10 SINE Alu -5 112 23 7 1141 501 261 144 36 chr15 72941784 72941951 -30553023 - ID_B1 SINE B4 -39 185 1 7 1141 531 250 205 5 chr15 72942353 72942542 -30552432 - MTD LTR MaLR -15 404 192 7 1141 556 236 28 0 chr15 72942561 72942667 -30552307 - B1_Mur1 SINE Alu -36 113 5 7 1141 734 284 20 20 chr15 72942670 72942871 -30552103 - MTD LTR MaLR -209 210 10 7 1141 222 97 0 0 chr15 72943219 72943250 -30551724 + (TC)n Simple_repeat Simple_repeat 1 31 0 7 1141 549 146 0 0 chr15 72943250 72943373 -30551601 + (TCTA)n Simple_repeat Simple_repeat 2 124 0 7 1141 882 188 232 104 chr15 72945064 72945358 -30549616 + MT2A LTR ERVL 9 364 -169 7 1141 708 125 62 0 chr15 72945358 72945470 -30549504 - PB1D9 SINE Alu 0 120 2 7 1141 882 188 232 104 chr15 72945470 72945520 -30549454 + MT2A LTR ERVL 365 397 -136 7 1141 585 105 0 0 chr15 72945890 72945976 -30548998 + (CACG)n Simple_repeat Simple_repeat 2 87 0 7 1141 479 248 66 22 chr15 72946944 72947080 -30547894 - ID_B1 SINE B4 -82 142 1 7 1141 366 23 0 0 chr15 72948054 72948097 -30546877 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 1141 1304 192 58 74 chr15 72950957 72951266 -30543708 - RMER4A LTR ERVK 0 466 163 7 1141 557 229 41 0 chr15 72951781 72951903 -30543071 + ID_B1 SINE B4 98 224 0 7 1141 284 221 14 29 chr15 72951935 72952005 -30542969 - PB1D10 SINE Alu -23 94 26 7 1141 242 319 10 60 chr15 72952005 72952033 -30542941 - MT2B LTR ERVL -349 250 158 7 1141 963 75 15 0 chr15 72952150 72952283 -30542691 + B1_Mus1 SINE Alu 5 139 -9 7 1141 225 266 67 75 chr15 72952169 72952303 -30542671 - YREP_Mm Unknown Unknown -1518 294 162 7 1141 411 274 35 0 chr15 72953240 72953353 -30541621 + RSINE1 SINE B4 6 122 -43 7 1141 439 124 33 125 chr15 72953412 72953428 -30541546 + MT2B LTR ERVL 149 153 -448 7 1141 666 124 8 55 chr15 72953428 72953556 -30541418 + B1_Mus2 SINE Alu 1 122 -25 7 1141 374 211 90 66 chr15 72954900 72954915 -30540059 + B1F2 SINE Alu 12 26 -123 7 1141 1936 199 58 2 chr15 72954915 72955314 -30539660 + MTC LTR MaLR 1 421 0 7 1141 374 211 90 66 chr15 72955314 72955420 -30539554 + B1F2 SINE Alu 27 136 -13 7 1141 589 224 47 94 chr15 72956015 72956207 -30538767 - B3 SINE B2 -8 208 8 7 1141 333 239 60 68 chr15 72956234 72956351 -30538623 + PB1D9 SINE Alu 5 120 0 7 1141 849 223 9 1 chr15 72956353 72956536 -30538438 + B3 SINE B2 1 187 -11 7 1141 603 240 65 71 chr15 72956540 72956724 -30538250 - B3A SINE B2 -13 185 3 7 1141 1506 53 27 0 chr15 72959517 72959705 -30535269 - B2_Mm1a SINE B2 0 193 1 7 1141 548 261 7 14 chr15 72960116 72960246 -30534728 + RSINE1 SINE B4 4 133 -32 7 1141 490 84 48 0 chr15 72960246 72960329 -30534645 + (CACG)n Simple_repeat Simple_repeat 1 87 0 7 1141 548 261 7 14 chr15 72960329 72960342 -30534632 + RSINE1 SINE B4 134 145 -20 7 1141 760 55 227 9 chr15 72960635 72960745 -30534229 - B1_Mus2 SINE Alu -13 134 1 7 1141 403 290 332 10 chr15 72961544 72961747 -30533227 - B4A SINE B4 0 292 25 7 1141 703 212 128 178 chr15 72962681 72962985 -30531989 + MTD LTR MaLR 1 289 -130 7 1141 978 92 35 0 chr15 72963012 72963154 -30531820 - B1_Mus1 SINE Alu 0 148 2 7 1141 1347 279 176 32 chr15 72963242 72963956 -30531018 + MTD-int LTR MaLR 1 817 -281 7 1141 201 139 56 0 chr15 72963966 72964002 -30530972 + CT-rich Low_complexity Low_complexity 1 38 0 7 1141 243 210 79 16 chr15 72964008 72964071 -30530903 - PB1D9 SINE Alu -13 107 41 7 1141 243 272 32 32 chr15 72964075 72964170 -30530804 + MTD-int LTR MaLR 969 1063 -195 7 1141 637 180 102 0 chr15 72964172 72964300 -30530674 - B1_Mur2 SINE Alu 0 149 9 7 1141 252 319 0 40 chr15 72964238 72964313 -30530661 - B4A SINE B4 -137 155 84 7 1141 414 0 0 0 chr15 72964349 72964395 -30530579 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 7 1141 817 73 18 9 chr15 72964395 72964505 -30530469 - PB1D9 SINE Alu -9 111 1 7 1141 291 54 0 0 chr15 72964525 72964562 -30530412 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 7 1141 1050 54 81 0 chr15 72964562 72964710 -30530264 - B2_Mm2 SINE B2 -34 161 2 7 1141 1151 89 106 0 chr15 72964720 72964899 -30530075 - L1Md_F2 LINE L1 0 6582 6385 7 1141 272 284 11 0 chr15 72964899 72964978 -30529996 + MTD-int LTR MaLR 1017 1096 -2 7 1141 974 229 106 12 chr15 72964985 72965241 -30529733 + MTD LTR MaLR 18 297 -122 7 1141 1584 122 126 48 chr15 72965306 72965333 -30529641 + ORR1B1 LTR MaLR 3 27 -367 7 1141 1136 64 14 0 chr15 72965333 72965474 -30529500 + B1_Mus2 SINE Alu 1 143 -4 7 1141 201 39 0 0 chr15 72965474 72965500 -30529474 + (CAAAA)n Simple_repeat Simple_repeat 4 29 0 7 1141 1584 122 126 48 chr15 72965500 72965781 -30529193 + ORR1B1 LTR MaLR 28 335 -59 7 1141 235 237 104 0 chr15 72965775 72965910 -30529064 + RMER17C LTR ERVK 128 276 -134 7 1141 310 206 0 0 chr15 72965921 72965984 -30528990 + ORR1B1 LTR MaLR 324 386 -8 7 1141 225 292 13 53 chr15 72965991 72966067 -30528907 + MTA_Mm LTR MaLR 310 382 -14 7 1141 575 189 0 11 chr15 72968035 72968217 -30526757 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 1141 311 185 228 53 chr15 72969548 72969662 -30525312 - B3A SINE B2 0 198 65 7 1141 669 246 211 24 chr15 72971780 72972026 -30522948 + B4 SINE B4 1 292 0 7 1141 25 31 0 0 chr15 72972246 72972278 -30522696 + AT_rich Low_complexity Low_complexity 1 32 0 7 1141 870 226 82 0 chr15 72972278 72972473 -30522501 + B3 SINE B2 5 215 -1 7 1141 401 297 133 0 chr15 72972499 72972627 -30522347 - B1_Mur1 SINE Alu -3 146 2 7 1141 281 309 20 86 chr15 72972627 72972750 -30522224 + RSINE1 SINE B4 53 165 0 7 1141 27 29 0 0 chr15 72972752 72972786 -30522188 + AT_rich Low_complexity Low_complexity 1 34 0 7 1141 636 197 67 22 chr15 72973044 72973179 -30521795 + B1_Mur1 SINE Alu 7 147 -2 7 1141 404 213 64 0 chr15 72973217 72973311 -30521663 + RSINE1 SINE B4 22 121 -44 7 1141 267 133 0 0 chr15 72973315 72973360 -30521614 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 1141 606 145 205 0 chr15 72973604 72973721 -30521253 + B1_Mus2 SINE Alu 1 141 -6 7 1141 363 220 97 18 chr15 72973758 72973867 -30521107 + B1_Mm SINE Alu 3 120 0 7 1141 377 259 230 57 chr15 72974121 72974330 -30520644 - B4 SINE B4 0 292 48 7 1141 949 201 50 15 chr15 72974852 72975054 -30519920 + B3 SINE B2 2 210 -6 7 1141 231 283 77 23 chr15 72975073 72975203 -30519771 - L1MB7 LINE L1 -41 6143 6007 7 1141 210 273 0 18 chr15 72975407 72975463 -30519511 + ID SINE ID 34 88 -136 7 1141 273 320 157 0 chr15 72975551 72975748 -30519226 + L1M5 LINE L1 4960 5187 -959 7 1141 296 290 53 11 chr15 72976343 72976437 -30518537 + B4A SINE B4 185 282 -10 7 1141 276 30 0 0 chr15 72976452 72976485 -30518489 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1141 319 291 52 59 chr15 72978174 72978309 -30516665 - B1F2 SINE Alu -1 148 15 7 1141 216 0 0 0 chr15 72979088 72979112 -30515862 + (C)n Simple_repeat Simple_repeat 1 24 0 7 1141 195 189 0 0 chr15 72980643 72980696 -30514278 + A-rich Low_complexity Low_complexity 1 53 0 7 1141 350 102 34 0 chr15 72981974 72982033 -30512941 + (TTCC)n Simple_repeat Simple_repeat 1 61 0 7 1141 810 229 85 0 chr15 72982037 72982225 -30512749 - ID_B1 SINE B4 -19 205 2 7 1141 438 310 41 12 chr15 72982419 72982589 -30512385 + Charlie4a DNA MER1_type 309 483 -25 7 1141 308 241 43 69 chr15 72983166 72983282 -30511692 + PB1D10 SINE Alu 5 117 0 7 1141 397 276 198 45 chr15 72983919 72984166 -30510808 + B4A SINE B4 8 292 0 7 1141 315 294 88 0 chr15 72984215 72984351 -30510623 + B1F SINE Alu 1 148 -1 7 1141 217 0 61 0 chr15 72985762 72985795 -30509179 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 7 1141 270 188 141 0 chr15 72987011 72987075 -30507899 + ID_B1 SINE B4 104 176 -48 7 1141 258 209 95 95 chr15 72987075 72987106 -30507868 + PB1D10 SINE Alu 23 117 0 7 1141 474 147 0 0 chr15 72989509 72989584 -30505390 + B1_Mus2 SINE Alu 18 92 -55 7 1141 213 282 0 66 chr15 72989759 72989835 -30505139 - MIR3 SINE MIR -123 85 15 7 1141 1944 147 8 62 chr15 72990255 72990639 -30504335 + ORR1B1 LTR MaLR 24 386 -8 7 1141 408 149 15 15 chr15 72991296 72991364 -30503610 + ID4_ SINE ID 3 70 -13 7 1141 1225 48 0 7 chr15 72991687 72991834 -30503140 - B1_Mus1 SINE Alu -2 146 1 7 1141 332 321 86 20 chr15 72992642 72992839 -30502135 - Lx9 LINE L1 -174 7470 7261 7 1141 342 161 48 0 chr15 72993747 72993809 -30501165 + B3 SINE B2 8 72 -144 7 1141 330 243 57 28 chr15 72994178 72994284 -30500690 - PB1D10 SINE Alu -2 115 7 7 1141 618 205 16 32 chr15 72994311 72994437 -30500537 - B1_Mur1 SINE Alu -5 144 21 7 1141 455 251 71 13 chr15 72995659 72995871 -30499103 + MTC LTR MaLR 166 421 0 7 1141 358 252 58 10 chr15 72995965 72996069 -30498905 + PB1D9 SINE Alu 3 111 -9 7 1141 740 264 127 20 chr15 72996277 72996521 -30498453 + MTEb LTR MaLR 101 370 -9 8 1141 225 0 0 0 chr15 72996964 72996989 -30497985 + (CA)n Simple_repeat Simple_repeat 1 25 0 8 1141 829 297 241 48 chr15 72997232 72998089 -30496885 + Lx8 LINE L1 6240 7262 -211 8 1141 304 314 31 62 chr15 72998638 72998767 -30496207 - Lx7 LINE L1 -1012 6684 6560 8 1141 395 311 185 0 chr15 72998767 72999021 -30495953 + Charlie1 DNA MER1_type 1852 2152 -629 8 1141 626 218 50 69 chr15 72999086 72999288 -30495686 + B3A SINE B2 1 198 0 8 1141 239 0 32 0 chr15 72999884 72999915 -30495059 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 1141 1152 65 0 0 chr15 73000000 73000138 -30494836 - B1_Mus2 SINE Alu -8 139 2 1 1141 392 305 0 48 chr15 73000176 73000210 -30494764 - B1_Mur3 SINE Alu -8 141 110 2 1141 216 0 0 0 chr15 73000210 73000234 -30494740 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 1141 472 182 0 26 chr15 73000234 73000323 -30494651 - PB1D9 SINE Alu -40 109 24 2 1141 295 358 126 0 chr15 73000346 73000441 -30494533 - PB1D10 SINE Alu -8 109 3 4 1141 421 290 150 14 chr15 73000441 73000503 -30494471 - ID SINE ID -141 83 3 5 1141 186 316 9 67 chr15 73000544 73000649 -30494325 + L4 LINE RTE 1666 1764 -265 6 1141 502 42 70 0 chr15 73000715 73000786 -30494188 + B1_Mm SINE Alu 71 146 -1 7 1141 202 195 0 0 chr15 73001690 73001731 -30493243 + GA-rich Low_complexity Low_complexity 3 43 0 8 1141 217 147 0 0 chr15 73001743 73001777 -30493197 + ID SINE ID 3 36 -188 9 1141 1126 115 0 0 chr15 73002209 73002357 -30492617 + B1_Mus1 SINE Alu 1 148 0 1 1141 767 201 14 35 chr15 73002380 73002524 -30492450 + B1_Mur1 SINE Alu 9 149 0 1 1141 280 79 0 0 chr15 73002526 73002564 -30492410 + B1_Mur4 SINE Alu 2 39 -111 1 1141 228 86 0 0 chr15 73002575 73002610 -30492364 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1141 886 243 131 34 chr15 73002783 73002977 -30491997 - RLTR20B3 LTR ERVK -43 534 322 1 1141 240 86 0 0 chr15 73002977 73003012 -30491962 + (CTGTG)n Simple_repeat Simple_repeat 3 37 0 1 1141 886 243 131 34 chr15 73003012 73003115 -30491859 - RLTR20B3 LTR ERVK -256 321 209 1 1141 223 265 176 0 chr15 73003855 73003923 -30491051 - MIRc SINE MIR -75 193 114 1 1141 417 39 0 0 chr15 73005062 73005113 -30489861 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1141 444 222 105 25 chr15 73006157 73006295 -30488679 + ID_B1 SINE B4 81 223 -69 1 1141 1330 143 105 14 chr15 73006474 73006714 -30488260 - RMER4B LTR ERVK -284 301 45 1 1141 360 43 0 0 chr15 73006714 73006760 -30488214 + (TTTC)n Simple_repeat Simple_repeat 1 46 0 2 1141 1007 78 0 73 chr15 73006760 73006906 -30488068 - B1_Mus1 SINE Alu -8 140 5 2 1141 1330 143 105 14 chr15 73006906 73006945 -30488029 - RMER4B LTR ERVK -541 44 2 1 142 780 232 62 6 chr15 73006945 73007113 -30487861 - B3A SINE B2 -20 178 1 2 1142 186 250 45 0 chr15 73007753 73007797 -30487177 + L3 LINE CR1 3702 3747 -742 2 1142 897 227 141 28 chr15 73008871 73009120 -30485854 + ORR1D2 LTR MaLR 91 367 -3 2 1142 21 0 0 0 chr15 73009246 73009267 -30485707 + AT_rich Low_complexity Low_complexity 1 21 0 2 1142 513 207 269 12 chr15 73009278 73009449 -30485525 + B3 SINE B2 2 216 0 2 1142 23 0 0 0 chr15 73009458 73009481 -30485493 + AT_rich Low_complexity Low_complexity 1 23 0 2 1142 1357 90 26 0 chr15 73011031 73011220 -30483754 + B2_Mm2 SINE B2 2 195 0 2 1142 1224 74 91 0 chr15 73011220 73011395 -30483579 + B2_Mm2 SINE B2 5 195 0 2 1142 1394 83 5 20 chr15 73011481 73011678 -30483296 + B2_Mm2 SINE B2 2 195 0 3 1142 261 0 0 0 chr15 73011887 73011916 -30483058 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 3 1142 901 209 25 35 chr15 73012003 73012167 -30482807 + B3 SINE B2 1 167 -49 3 1142 368 68 0 33 chr15 73012167 73012228 -30482746 + (CATA)n Simple_repeat Simple_repeat 4 62 0 3 1142 901 209 25 35 chr15 73012228 73012261 -30482713 + B3 SINE B2 168 196 -20 3 1142 355 159 111 0 chr15 73012341 73012404 -30482570 + B1F2 SINE Alu 22 91 -58 3 1142 26 104 0 0 chr15 73015226 73015322 -30479652 + GC_rich Low_complexity Low_complexity 1 96 0 3 1142 21 0 0 0 chr15 73015343 73015364 -30479610 + GC_rich Low_complexity Low_complexity 1 21 0 3 1142 327 178 31 37 chr15 73015371 73015534 -30479440 + GA-rich Low_complexity Low_complexity 1 162 0 3 1142 222 316 50 40 chr15 73018086 73018128 -30476846 + ID SINE ID 37 79 -145 3 1142 380 262 12 23 chr15 73018128 73018214 -30476760 + PB1D9 SINE Alu 1 85 -35 3 1142 517 204 0 64 chr15 73018227 73018337 -30476637 - ID_B1 SINE B4 0 224 122 4 1142 573 277 43 19 chr15 73018564 73018726 -30476248 + ID_B1 SINE B4 12 177 -47 4 1142 897 144 30 0 chr15 73018744 73018876 -30476098 - B1_Mus2 SINE Alu -8 139 4 4 1142 428 308 28 83 chr15 73018879 73019024 -30475950 + RSINE1 SINE B4 28 164 -1 4 1142 201 143 0 0 chr15 73019163 73019198 -30475776 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1142 930 153 65 16 chr15 73019638 73019824 -30475150 + B2_Mm2 SINE B2 1 195 0 4 1142 471 78 0 0 chr15 73019943 73020007 -30474967 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 4 1142 223 203 188 0 chr15 73020814 73020878 -30474096 - ID4 SINE ID -6 77 2 4 1142 662 190 48 27 chr15 73020924 73021070 -30473904 + B1F SINE Alu 1 149 0 4 1142 1195 51 0 0 chr15 73021126 73021264 -30473710 + B1_Mus1 SINE Alu 2 139 -9 4 1142 531 0 0 0 chr15 73021264 73021323 -30473651 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1142 845 140 0 8 chr15 73021612 73021742 -30473232 + B1_Mur3 SINE Alu 21 149 0 5 1142 1101 68 7 27 chr15 73023184 73023334 -30471640 - B1_Mus2 SINE Alu 0 147 1 5 1142 408 208 13 0 chr15 73023362 73023439 -30471535 + B1F SINE Alu 69 146 -3 5 1142 643 206 63 0 chr15 73023703 73023829 -30471145 + B1_Mur1 SINE Alu 9 142 -7 5 1142 1961 155 119 79 chr15 73023915 73024343 -30470631 + RLTR41 LTR ERV1 2 446 0 5 1142 284 290 29 0 chr15 73024384 73024453 -30470521 + ID4_ SINE ID 2 72 -11 5 1142 673 203 24 0 chr15 73024491 73024614 -30470360 + B1_Mur2 SINE Alu 17 142 -7 5 1142 262 222 19 0 chr15 73024624 73024678 -30470296 + B3A SINE B2 1 55 -143 5 1142 1560 184 148 31 chr15 73024679 73025038 -30469936 + RMER16 LTR ERVK 3 403 -130 5 1142 1142 63 0 0 chr15 73025042 73025184 -30469790 + B1_Mus1 SINE Alu 7 148 0 6 1142 863 129 14 7 chr15 73025195 73025336 -30469638 + RMER16 LTR ERVK 392 533 0 5 1142 660 273 73 17 chr15 73025336 73025478 -30469496 + B3 SINE B2 42 193 -23 6 1142 1030 65 7 28 chr15 73025479 73025621 -30469353 - B1_Mus1 SINE Alu 0 148 10 6 1142 425 217 0 124 chr15 73025523 73025644 -30469330 - MT2B LTR ERVL -344 257 152 6 1142 295 304 113 0 chr15 73025736 73025785 -30469189 + RSINE1 SINE B4 4 63 -102 6 1142 4199 57 10 2 chr15 73025785 73026293 -30468681 + RLTR1B LTR ERV1 1 512 0 6 1142 295 304 113 0 chr15 73026293 73026358 -30468616 + RSINE1 SINE B4 64 130 -35 6 1142 472 210 68 48 chr15 73026561 73026687 -30468287 + B1_Mus1 SINE Alu 6 148 -1 6 1142 1606 148 58 6 chr15 73026687 73026999 -30467975 + Lx6 LINE L1 898 1225 -6503 6 1142 1391 202 71 24 chr15 73027034 73027328 -30467646 + ORR1C1 LTR MaLR 63 370 -8 6 1142 563 117 58 0 chr15 73027332 73027435 -30467539 + Lx6 LINE L1 1659 1767 -4113 6 1142 931 49 2 0 chr15 73027438 73027566 -30467408 + B1_Mm SINE Alu 2 132 -17 6 1142 502 205 83 133 chr15 73027439 73027619 -30467355 + MT2B LTR ERVL 167 337 -264 7 1142 8564 137 271 15 chr15 73027623 73027896 -30467078 + Lx6 LINE L1 1756 2017 -3863 6 1142 1159 62 0 33 chr15 73027896 73028036 -30466938 + B1_Mus1 SINE Alu 1 136 -12 7 1142 198 0 0 0 chr15 73028036 73028058 -30466916 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 7 1142 8564 137 271 15 chr15 73028068 73028119 -30466855 + Lx6 LINE L1 2018 2069 -3811 6 1142 243 103 0 0 chr15 73028119 73028158 -30466816 + (CCA)n Simple_repeat Simple_repeat 1 39 0 7 1142 8564 137 271 15 chr15 73028158 73028990 -30465984 + Lx6 LINE L1 2070 2947 -2933 6 1142 1478 79 16 0 chr15 73028990 73029180 -30465794 + B2_Mm2 SINE B2 1 193 -2 7 1142 8564 137 271 15 chr15 73029180 73030140 -30464834 + Lx6 LINE L1 2948 4415 -1465 6 1142 244 233 32 169 chr15 73030144 73030268 -30464706 + MT2B2 LTR ERVL 153 259 -325 7 1142 524 159 12 68 chr15 73030159 73030275 -30464699 + B1_Mur4 SINE Alu 2 113 -36 7 1142 441 0 0 0 chr15 73030284 73030333 -30464641 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1142 225 0 0 0 chr15 73030398 73030423 -30464551 + (A)n Simple_repeat Simple_repeat 1 25 0 7 1142 7060 139 46 6 chr15 73030437 73030986 -30463988 + Lx6 LINE L1 5446 6013 -1447 6 1142 648 70 0 0 chr15 73030986 73031072 -30463902 + (TGGA)n Simple_repeat Simple_repeat 4 89 0 7 1142 7060 190 81 19 chr15 73031072 73032261 -30462713 + Lx6 LINE L1 6014 7289 -171 6 1142 382 222 8 8 chr15 73032264 73032391 -30462583 + GA-rich Low_complexity Low_complexity 3 129 0 8 1142 186 133 0 0 chr15 73033501 73033531 -30461443 + (CGTG)n Simple_repeat Simple_repeat 1 30 0 8 1142 1254 41 7 0 chr15 73033582 73033728 -30461246 - B1_Mus1 SINE Alu 0 148 2 8 1142 1896 203 70 33 chr15 73033772 73034255 -30460719 - Lx9 LINE L1 -281 7363 6863 8 1142 1496 53 27 0 chr15 73034255 73034443 -30460531 + B2_Mm2 SINE B2 3 195 0 8 1142 614 216 18 0 chr15 73034499 73034610 -30460364 - B1_Mur1 SINE Alu -7 142 30 8 1142 501 280 8 0 chr15 73034649 73034767 -30460207 + PB1D7 SINE Alu 1 119 -1 8 1142 348 284 25 84 chr15 73034769 73034888 -30460086 + RSINE1 SINE B4 2 113 -52 8 1142 554 75 12 0 chr15 73034902 73034982 -30459992 + (TC)n Simple_repeat Simple_repeat 2 82 0 8 1142 387 0 0 0 chr15 73034982 73035025 -30459949 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 1142 206 95 0 23 chr15 73035054 73035064 -30459910 + (CAAA)n Simple_repeat Simple_repeat 2 11 0 9 1142 805 197 14 7 chr15 73035064 73035212 -30459762 + B1_Mur2 SINE Alu 1 149 0 9 1142 206 95 0 23 chr15 73035212 73035244 -30459730 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 9 1142 23 33 0 0 chr15 73035779 73035809 -30459165 + AT_rich Low_complexity Low_complexity 1 30 0 9 1142 369 250 59 50 chr15 73036806 73036826 -30458148 + B4 SINE B4 65 85 -207 9 1142 673 205 0 52 chr15 73036826 73036960 -30458014 + B1_Mur1 SINE Alu 1 127 -22 9 1142 757 225 52 31 chr15 73037337 73037530 -30457444 - B3A SINE B2 0 198 2 9 1142 273 194 32 0 chr15 73037721 73037783 -30457191 + Lx9 LINE L1 7385 7448 -196 9 1142 195 100 0 0 chr15 73037787 73037817 -30457157 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 1142 206 158 0 26 chr15 73037833 73037872 -30457102 + GA-rich Low_complexity Low_complexity 2 39 0 9 1142 2260 90 14 80 chr15 73038062 73038412 -30456562 - ORR1A2 LTR MaLR 0 327 1 1 1142 1263 48 0 0 chr15 73038589 73038736 -30456238 - B1_Mm SINE Alu 0 147 1 1 1142 720 169 161 44 chr15 73038802 73038982 -30455992 + B3 SINE B2 10 210 -6 1 1142 725 90 261 0 chr15 73038995 73039106 -30455868 - B1_Mus2 SINE Alu -6 141 2 1 1142 443 292 66 0 chr15 73039944 73040050 -30454924 - PB1D7 SINE Alu 0 120 8 1 1142 223 204 20 0 chr15 73040506 73040555 -30454419 + GA-rich Low_complexity Low_complexity 1 50 0 1 1142 240 358 17 52 chr15 73040593 73040708 -30454266 + PB1D7 SINE Alu 4 114 -6 1 1142 309 378 110 0 chr15 73040708 73040835 -30454139 - ID_B1 SINE B4 -81 143 3 1 1142 657 183 0 0 chr15 73040848 73040963 -30454011 - B1_Mus1 SINE Alu -23 125 11 1 1142 292 279 126 11 chr15 73042998 73043085 -30451889 - PB1 SINE Alu -12 115 19 1 1142 293 228 48 60 chr15 73044742 73044803 -30450171 - PB1D10 SINE Alu -2 115 55 1 1142 270 73 0 0 chr15 73044803 73044844 -30450130 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1 1142 1513 29 35 0 chr15 73044844 73045018 -30449956 - B2_Mm1a SINE B2 -12 181 2 1 1142 1391 95 11 0 chr15 73045018 73045208 -30449766 - B2_Mm1t SINE B2 0 193 2 1 1142 293 228 48 60 chr15 73045208 73045228 -30449746 - PB1D10 SINE Alu -63 54 35 1 1142 880 335 41 30 chr15 73045272 73045324 -30449650 - B4 SINE B4 -14 278 227 1 1142 675 137 90 22 chr15 73045324 73045458 -30449516 - B1_Mm SINE Alu 0 147 5 1 1142 880 335 41 30 chr15 73045458 73045673 -30449301 - B4 SINE B4 -66 226 8 1 1142 2037 157 103 16 chr15 73046971 73047358 -30447616 + MTC LTR MaLR 1 421 0 1 1142 413 115 192 0 chr15 73047673 73047751 -30447223 - B1_Mur3 SINE Alu -12 137 45 1 1142 3497 28 2 0 chr15 73047751 73048146 -30446828 + MTA_Mm LTR MaLR 1 396 0 1 1142 8582 18 2 0 chr15 73048146 73049155 -30445819 + MTA_Mm-int LTR MaLR 1 1011 -87 1 1142 217 331 138 23 chr15 73049263 73049314 -30445660 - B1F2 SINE Alu -3 146 91 1 1142 1119 70 0 27 chr15 73049314 73049461 -30445513 - B1_Mus1 SINE Alu -5 143 1 1 1142 217 331 138 23 chr15 73049461 73049539 -30445435 - B1F2 SINE Alu -59 90 4 1 1142 762 159 118 7 chr15 73049529 73049681 -30445293 - RMER4A LTR ERVK 0 466 298 1 1142 1303 86 11 0 chr15 73049655 73049829 -30445145 - B2_Mm2 SINE B2 -19 176 1 1 1142 249 273 0 0 chr15 73049852 73049907 -30445067 + (CATA)n Simple_repeat Simple_repeat 2 56 0 1 1142 262 289 24 81 chr15 73050017 73050057 -30444917 + PB1D7 SINE Alu 4 115 0 1 1142 295 280 0 51 chr15 73050057 73050136 -30444838 + ID_B1 SINE B4 148 222 -2 1 1142 570 251 57 18 chr15 73050297 73050548 -30444426 + ORR1D2 LTR MaLR 1 377 -2 1 1142 282 257 12 125 chr15 73050548 73050628 -30444346 - PB1 SINE Alu -37 112 42 1 1142 1710 11 0 5 chr15 73050665 73050855 -30444119 + B2_Mm1a SINE B2 1 189 -4 1 1142 1269 41 0 0 chr15 73050865 73051012 -30443962 + B1_Mus1 SINE Alu 1 147 -1 1 1142 1241 110 0 6 chr15 73051117 73051291 -30443683 - B2_Mm2 SINE B2 0 195 23 1 1142 247 258 0 46 chr15 73051311 73051376 -30443598 - ID4 SINE ID -1 82 21 1 1142 239 336 103 0 chr15 73052448 73052484 -30442490 - ID_B1 SINE B4 -95 129 2 1 1142 270 312 12 0 chr15 73052484 73052564 -30442410 - ID4 SINE ID -1 82 2 1 1142 519 309 72 0 chr15 73052660 73052812 -30442162 - RSINE1 SINE B4 -1 164 2 1 1142 207 0 0 0 chr15 73053176 73053199 -30441775 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1142 1712 26 0 0 chr15 73054090 73054282 -30440692 - B2_Mm1t SINE B2 0 193 2 1 1142 226 266 62 15 chr15 73054322 73054387 -30440587 + RSINE1 SINE B4 3 70 -95 1 1142 256 326 79 0 chr15 73056209 73056298 -30438676 - PB1D9 SINE Alu -9 111 16 1 1142 274 286 14 0 chr15 73056317 73056387 -30438587 - ID4_ SINE ID -11 72 2 1 1142 368 0 43 0 chr15 73056394 73056441 -30438533 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 1 1142 222 294 113 38 chr15 73056456 73056562 -30438412 + B1F SINE Alu 21 134 -15 1 1142 198 353 0 12 chr15 73057105 73057191 -30437783 + L2b LINE L2 3041 3125 -250 1 1142 1207 54 0 0 chr15 73057994 73058142 -30436832 + B1_Mus1 SINE Alu 1 148 0 1 1142 402 258 161 0 chr15 73058398 73058522 -30436452 + RSINE1 SINE B4 3 146 -19 1 1142 21 36 0 0 chr15 73058539 73058567 -30436407 + AT_rich Low_complexity Low_complexity 1 28 0 1 1142 212 260 0 0 chr15 73058799 73058849 -30436125 + ID4 SINE ID 15 64 -19 1 1142 1735 191 109 0 chr15 73059092 73059458 -30435516 - MTD LTR MaLR -8 411 6 1 1142 1091 58 58 0 chr15 73059736 73059875 -30435099 - B1_Mm SINE Alu 0 147 1 1 1142 264 120 0 0 chr15 73059927 73059977 -30434997 + (G)n Simple_repeat Simple_repeat 1 50 0 1 1142 316 252 93 0 chr15 73060664 73060771 -30434203 + PB1D10 SINE Alu 1 117 0 1 1142 543 252 8 23 chr15 73060773 73060903 -30434071 + RSINE1 SINE B4 2 129 -36 1 1142 1111 220 9 5 chr15 73061203 73061413 -30433561 - B3 SINE B2 -5 211 1 1 1142 378 0 0 0 chr15 73061478 73061520 -30433454 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1142 315 0 0 0 chr15 73061520 73061554 -30433420 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 1142 243 167 0 0 chr15 73061674 73061716 -30433258 - ID4 SINE ID -41 42 1 1 1142 1477 72 0 25 chr15 73061738 73061938 -30433036 + B2_Mm2 SINE B2 1 195 0 1 1142 183 80 0 0 chr15 73061938 73061963 -30433011 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1142 243 257 40 26 chr15 73062032 73062108 -30432866 - RSINE1 SINE B4 -62 103 27 1 1142 260 280 66 0 chr15 73062103 73062200 -30432774 - PB1D10 SINE Alu -8 112 1 1 1142 275 275 177 61 chr15 73062604 73062751 -30432223 + MLT1D LTR MaLR 140 303 -202 1 1142 700 144 55 23 chr15 73062773 73062901 -30432073 - B1_Mus1 SINE Alu -16 132 1 1 1142 201 167 0 0 chr15 73062904 73062934 -30432040 + T-rich Low_complexity Low_complexity 13 42 0 1 1142 1162 41 0 40 chr15 73062934 73063086 -30431888 - B1_Mm SINE Alu 0 147 2 1 1142 201 167 0 0 chr15 73063086 73063097 -30431877 + T-rich Low_complexity Low_complexity 2 12 0 1 1142 579 235 42 102 chr15 73063112 73063278 -30431696 - B3A SINE B2 -1 197 42 1 1142 854 238 156 16 chr15 73063399 73063655 -30431319 + B4 SINE B4 1 292 0 1 1142 396 0 0 0 chr15 73063674 73063718 -30431256 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1142 251 333 73 0 chr15 73063904 73064000 -30430974 + PB1D10 SINE Alu 5 107 -10 1 1142 222 37 0 0 chr15 73064000 73064027 -30430947 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1142 354 321 64 50 chr15 73064054 73064195 -30430779 + B1F2 SINE Alu 1 143 -6 1 1142 369 242 113 70 chr15 73064205 73064347 -30430627 + B1_Mur3 SINE Alu 2 149 0 1 1142 793 244 37 0 chr15 73064750 73064914 -30430060 - B3A SINE B2 -24 174 5 1 1142 25 0 0 0 chr15 73064924 73064949 -30430025 + AT_rich Low_complexity Low_complexity 1 25 0 1 1142 436 132 321 0 chr15 73066108 73066214 -30428760 - B2_Mm2 SINE B2 -55 140 1 1 1142 563 248 30 65 chr15 73066810 73067077 -30427897 + L1M4 LINE L1 4957 5220 -926 1 1142 268 156 0 0 chr15 73067148 73067193 -30427781 - PB1D9 SINE Alu -64 56 12 1 1142 402 221 57 9 chr15 73067161 73067266 -30427708 + B1_Mus2 SINE Alu 29 138 -9 1 1142 202 0 59 29 chr15 73067270 73067304 -30427670 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1142 534 259 110 26 chr15 73067424 73067697 -30427277 + L1M4 LINE L1 5421 5716 -458 1 1142 911 162 7 0 chr15 73067698 73067834 -30427140 + B1_Mus1 SINE Alu 1 137 -11 1 1142 207 203 186 14 chr15 73068152 73068222 -30426752 - MIRm SINE MIR -149 127 46 1 1142 3308 43 2 5 chr15 73068350 73068747 -30426227 + MTA_Mm LTR MaLR 1 396 0 1 1142 1120 204 0 5 chr15 73068759 73068966 -30426008 - B3 SINE B2 -7 209 4 1 1142 203 119 23 23 chr15 73069438 73069481 -30425493 + A-rich Low_complexity Low_complexity 3 45 0 1 1142 311 237 51 26 chr15 73069521 73069599 -30425375 - ID2 SINE ID -1 82 3 1 1142 292 330 26 0 chr15 73069885 73070000 -30424974 - Charlie1a DNA MER1_type -573 882 765 1 1142 285 294 32 32 chr15 73070235 73070358 -30424616 + RMER15 LTR ERVL 357 479 -96 1 1142 348 291 39 8 chr15 73070647 73070775 -30424199 - Charlie1a DNA MER1_type -1160 295 164 1 1142 207 0 0 0 chr15 73072280 73072303 -30422671 + (CATGC)n Simple_repeat Simple_repeat 4 26 0 1 1142 22 0 0 0 chr15 73073371 73073393 -30421581 + AT_rich Low_complexity Low_complexity 1 22 0 1 1142 246 242 30 15 chr15 73074129 73074196 -30420778 + ID4 SINE ID 9 76 -7 1 1142 3822 65 124 0 chr15 73075708 73076231 -30418743 + L1_Mus4 LINE L1 6043 6630 -6 1 1142 207 0 0 0 chr15 73076349 73076372 -30418602 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1142 765 200 56 45 chr15 73077358 73077499 -30417475 - B3 SINE B2 -1 215 72 1 1142 252 0 0 0 chr15 73077499 73077527 -30417447 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1142 765 200 56 45 chr15 73077527 73077563 -30417411 - B3 SINE B2 -145 71 36 1 1142 262 214 131 52 chr15 73077955 73078074 -30416900 + B1_Mur2 SINE Alu 20 149 0 1 1142 370 358 52 26 chr15 73078201 73078356 -30416618 - RSINE1 SINE B4 -4 161 3 1 1142 189 154 0 0 chr15 73078465 73078504 -30416470 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1142 1235 34 0 0 chr15 73078642 73078789 -30416185 + B1_Mus2 SINE Alu 1 147 0 1 1142 24 0 0 0 chr15 73078789 73078813 -30416161 + AT_rich Low_complexity Low_complexity 1 24 0 1 1142 243 247 44 15 chr15 73078956 73079041 -30415933 - PB1D10 SINE Alu -15 105 17 1 1142 1271 41 0 0 chr15 73079262 73079409 -30415565 + B1_Mus2 SINE Alu 1 147 0 2 1142 208 324 29 0 chr15 73079693 73079761 -30415213 + MIRc SINE MIR 66 135 -133 2 1142 776 145 250 48 chr15 73079836 73080024 -30414950 + URR1A DNA MER1_type 1 226 0 2 1142 980 64 0 41 chr15 73081284 73081430 -30413544 + B1_Mm SINE Alu 8 147 0 2 1142 9247 106 35 13 chr15 73081440 73083157 -30411817 + Lx2 LINE L1 5232 6997 0 2 1142 266 123 51 34 chr15 73085227 73085286 -30409688 - L2c LINE L2 -61 3326 3267 2 1142 227 191 30 45 chr15 73085284 73085350 -30409624 + L2c LINE L2 3280 3344 -43 2 1142 22 0 0 0 chr15 73086985 73087007 -30407967 + GC_rich Low_complexity Low_complexity 1 22 0 2 1142 22 0 0 0 chr15 73088796 73088818 -30406156 + AT_rich Low_complexity Low_complexity 1 22 0 2 1142 301 385 34 17 chr15 73090621 73090798 -30404176 + MER82 DNA MER2_type 473 652 -1 2 1142 3117 30 8 0 chr15 73091206 73091576 -30403398 - L1_Mus1 LINE L1 -1 6566 6194 2 1142 1159 91 91 0 chr15 73091975 73092150 -30402824 - B2_Mm1a SINE B2 0 193 3 2 1142 400 199 38 37 chr15 73092208 73092332 -30402642 - L1MD LINE L1 -867 5492 5374 2 1142 501 261 139 26 chr15 73092359 73092662 -30402312 - L1MD LINE L1 -861 5285 4949 2 1142 297 370 20 20 chr15 73092767 73092869 -30402105 + PB1D10 SINE Alu 9 110 -7 2 1142 983 97 20 40 chr15 73093597 73093747 -30401227 + B1_Mus1 SINE Alu 2 148 0 2 1142 207 0 0 0 chr15 73093774 73093797 -30401177 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1142 366 257 47 9 chr15 73093891 73093997 -30400977 - PB1D7 SINE Alu -10 110 1 2 1142 501 196 87 10 chr15 73094081 73094184 -30400790 - PB1D9 SINE Alu -9 111 1 2 1142 416 284 7 29 chr15 73094281 73094419 -30400555 + ORR1E LTR MaLR 1 135 -224 2 1142 622 225 0 0 chr15 73094881 73094992 -30399982 - PB1D9 SINE Alu -5 115 5 2 1142 23 33 0 0 chr15 73095063 73095093 -30399881 + AT_rich Low_complexity Low_complexity 1 30 0 2 1142 1197 106 72 0 chr15 73095101 73095281 -30399693 + B2_Mm2 SINE B2 2 194 -1 2 1142 423 274 8 39 chr15 73096247 73096376 -30398598 - PB1 SINE Alu -2 125 1 2 1142 829 257 0 6 chr15 73097329 73097509 -30397465 - B3A SINE B2 -18 180 2 2 1142 279 0 0 0 chr15 73099382 73099413 -30395561 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1142 321 316 63 0 chr15 73100052 73100147 -30394827 - B1F SINE Alu -48 101 1 2 1142 184 315 48 48 chr15 73100158 73100345 -30394629 - L2 LINE L2 -598 2821 2635 2 1142 252 347 14 20 chr15 73100539 73100686 -30394288 - L2 LINE L2 -1154 2265 2120 2 1142 243 0 0 0 chr15 73101059 73101086 -30393888 + (TC)n Simple_repeat Simple_repeat 2 28 0 2 1142 1183 55 7 0 chr15 73101090 73101236 -30393738 - B1_Mus2 SINE Alu 0 147 1 2 1142 307 254 26 60 chr15 73101934 73102051 -30392923 - PB1D10 SINE Alu -4 113 1 2 1142 297 281 190 15 chr15 73102179 73102316 -30392658 + MLT2D LTR ERVL 387 547 -13 2 1142 184 381 43 18 chr15 73102318 73102481 -30392493 + L2 LINE L2 2479 2645 -774 2 1142 987 40 0 0 chr15 73102586 73102712 -30392262 - B1_Mus1 SINE Alu -13 135 10 2 1142 400 111 28 0 chr15 73102761 73102833 -30392141 + (TC)n Simple_repeat Simple_repeat 2 75 0 2 1142 1417 72 0 6 chr15 73103567 73103748 -30391226 + B2_Mm2 SINE B2 2 181 -14 2 1142 257 279 69 11 chr15 73104295 73104382 -30390592 + L1MB7 LINE L1 5680 5771 -408 2 1142 1038 207 61 0 chr15 73104384 73104582 -30390392 + B3 SINE B2 1 210 -6 2 1142 535 258 55 26 chr15 73104595 73104852 -30390122 + L1MB7 LINE L1 5832 6098 -86 2 1142 806 127 14 0 chr15 73108232 73108374 -30386600 + URR1A DNA MER1_type 83 226 0 2 1142 749 151 65 0 chr15 73108593 73108732 -30386242 - B1_Mur3 SINE Alu -1 148 1 2 1142 873 173 156 0 chr15 73108749 73108928 -30386046 - B3 SINE B2 -9 207 1 2 1142 577 224 26 8 chr15 73110099 73110216 -30384758 + PB1D7 SINE Alu 2 120 0 2 1142 418 136 318 0 chr15 73110719 73110807 -30384167 + B1_Mur2 SINE Alu 6 121 -28 2 1142 459 0 0 0 chr15 73110812 73110863 -30384111 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1142 31 0 0 0 chr15 73111043 73111074 -30383900 + AT_rich Low_complexity Low_complexity 1 31 0 2 1142 252 237 109 14 chr15 73111079 73111166 -30383808 + PB1D7 SINE Alu 29 120 -7 2 1142 778 264 79 10 chr15 73111183 73111386 -30383588 + ID_B1 SINE B4 1 217 -7 2 1142 217 158 17 50 chr15 73112687 73112747 -30382227 + GA-rich Low_complexity Low_complexity 3 60 0 2 1142 507 17 0 0 chr15 73114072 73114132 -30380842 + (CATA)n Simple_repeat Simple_repeat 2 61 0 2 1142 1122 151 16 5 chr15 73114536 73114722 -30380252 + B2_Mm2 SINE B2 1 188 -7 2 1142 279 304 45 0 chr15 73115093 73115205 -30379769 + PB1D10 SINE Alu 1 117 0 2 1142 381 202 0 0 chr15 73115205 73115279 -30379695 + A-rich Low_complexity Low_complexity 1 74 0 2 1142 465 17 0 0 chr15 73115279 73115362 -30379612 + L1Md_F3 LINE L1 6511 6584 0 2 1142 880 250 56 136 chr15 73116163 73116575 -30378399 - MTE2a LTR MaLR 0 379 1 2 1142 724 176 99 0 chr15 73116579 73116710 -30378264 + B1_Mur2 SINE Alu 5 148 -1 2 1142 283 244 25 37 chr15 73116821 73116902 -30378072 - B1_Mur1 SINE Alu -1 148 69 2 1142 338 266 68 44 chr15 73116860 73117079 -30377895 + MTB_Mm LTR MaLR 162 379 0 2 1142 247 274 6 82 chr15 73117264 73117423 -30377551 + L1MC5 LINE L1 7761 7907 -54 2 1142 256 261 62 0 chr15 73117907 73117972 -30377002 - ID4 SINE ID -7 76 8 2 1142 348 310 115 0 chr15 73118008 73118095 -30376879 - PB1 SINE Alu -30 97 1 2 1142 859 172 7 7 chr15 73118109 73118255 -30376719 - B1_Mus2 SINE Alu -1 146 1 2 1142 212 340 39 58 chr15 73118559 73118715 -30376259 + MIRc SINE MIR 6 158 -110 2 1142 273 298 35 88 chr15 73120716 73120830 -30374144 + ID_B1 SINE B4 69 176 -48 2 1142 390 262 64 18 chr15 73120743 73120852 -30374122 + PB1D7 SINE Alu 6 119 -1 2 1142 392 273 0 0 chr15 73122737 73122814 -30372160 + ID4 SINE ID 2 78 -5 2 1142 521 344 12 25 chr15 73123095 73123256 -30371718 + RSINE1 SINE B4 3 161 -4 2 1142 218 238 0 0 chr15 73123256 73123298 -30371676 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 1142 405 311 16 54 chr15 73123531 73123660 -30371314 + RSINE1 SINE B4 4 127 -38 2 1142 21 71 0 0 chr15 73123972 73124014 -30370960 + AT_rich Low_complexity Low_complexity 1 42 0 2 1142 28 0 0 0 chr15 73128420 73128448 -30366526 + AT_rich Low_complexity Low_complexity 1 28 0 2 1142 404 279 73 16 chr15 73129248 73129372 -30365602 - B1F SINE Alu -1 148 18 2 1142 222 37 0 0 chr15 73130110 73130137 -30364837 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1142 1091 37 0 0 chr15 73130137 73130272 -30364702 - B1_Mm SINE Alu 0 147 13 2 1142 467 223 26 126 chr15 73130172 73130362 -30364612 - MT2B LTR ERVL -337 264 94 2 1142 967 83 75 0 chr15 73131646 73131779 -30363195 + B1_Mus2 SINE Alu 5 147 0 2 1142 239 0 32 0 chr15 73132124 73132155 -30362819 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 1142 313 341 0 65 chr15 73132390 73132528 -30362446 + ID_B1 SINE B4 78 206 -18 2 1142 574 287 83 30 chr15 73132786 73133052 -30361922 + B4A SINE B4 5 284 -8 2 1142 24 0 0 0 chr15 73134454 73134478 -30360496 + AT_rich Low_complexity Low_complexity 1 24 0 2 1142 337 330 10 0 chr15 73136291 73136388 -30358586 - PB1D10 SINE Alu -17 100 3 2 1142 1986 172 92 8 chr15 73137412 73137793 -30357181 + MTC LTR MaLR 1 413 -8 2 1142 25 0 0 0 chr15 73137990 73138015 -30356959 + AT_rich Low_complexity Low_complexity 1 25 0 2 142 1160 62 0 0 chr15 73138042 73138187 -30356787 + B1_Mus1 SINE Alu 2 146 -2 2 1143 252 59 0 0 chr15 73139673 73139707 -30355267 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1143 824 201 7 7 chr15 73141142 73141287 -30353687 - B1_Mur4 SINE Alu -5 145 1 2 1143 180 0 0 0 chr15 73141496 73141516 -30353458 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1143 288 315 19 70 chr15 73142327 73142484 -30352490 - MER3 DNA MER1_type -60 149 1 2 1143 246 295 155 21 chr15 73142891 73142988 -30351986 - PB1 SINE Alu -4 123 14 2 1143 728 219 0 7 chr15 73143906 73144053 -30350921 + B1_Mus1 SINE Alu 1 146 -2 2 1143 247 330 93 31 chr15 73144967 73145064 -30349910 + PB1D7 SINE Alu 1 103 -17 2 1143 201 39 0 0 chr15 73145079 73145105 -30349869 + (CAGG)n Simple_repeat Simple_repeat 4 29 0 2 1143 480 220 0 20 chr15 73145672 73145774 -30349200 + PB1D9 SINE Alu 5 104 -16 2 1143 709 78 259 0 chr15 73145874 73145990 -30348984 + B1_Mus2 SINE Alu 2 147 0 2 1143 853 279 0 5 chr15 73146228 73146433 -30348541 + B3 SINE B2 2 205 -11 2 1143 306 164 0 0 chr15 73146523 73146578 -30348396 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 1143 866 262 34 0 chr15 73147307 73147513 -30347461 - B3 SINE B2 -3 213 1 2 1143 786 167 14 35 chr15 73147541 73147684 -30347290 + B1_Mur4 SINE Alu 2 141 -9 2 1143 210 333 96 52 chr15 73147705 73147841 -30347133 - B3 SINE B2 0 216 75 2 1143 1414 227 72 32 chr15 73148064 73148464 -30346510 - Lx6 LINE L1 -46 7414 6999 2 1143 1281 74 17 11 chr15 73148512 73148689 -30346285 + B2_Mm1t SINE B2 2 179 -14 2 1143 413 117 310 43 chr15 73148736 73148852 -30346122 + B2_Mm2 SINE B2 47 193 -2 2 1143 291 206 96 21 chr15 73149809 73149903 -30345071 + PB1D10 SINE Alu 14 114 -3 3 1143 383 302 30 60 chr15 73151711 73151845 -30343129 - RSINE1 SINE B4 -10 155 26 3 1143 240 339 136 16 chr15 73151902 73152211 -30342763 + Cheshire DNA MER1_type 1677 2022 -398 3 1143 469 295 20 13 chr15 73152278 73152429 -30342545 + RSINE1 SINE B4 4 155 -10 3 1143 829 305 98 3 chr15 73152493 73152851 -30342123 + Cheshire DNA MER1_type 2029 2420 0 3 1143 288 0 0 0 chr15 73153152 73153184 -30341790 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1143 306 0 0 0 chr15 73154136 73154170 -30340804 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1143 1559 159 117 6 chr15 73154914 73155231 -30339743 + ORR1D1-int LTR MaLR 1019 1370 0 3 1143 1953 151 38 25 chr15 73155233 73155600 -30339374 + ORR1D1 LTR MaLR 3 374 0 3 1143 613 221 7 56 chr15 73155823 73155967 -30339007 - B1_Mur1 SINE Alu 0 149 13 3 1143 1695 94 82 11 chr15 73156333 73156603 -30338371 + MT2B2 LTR ERVL 296 584 0 3 1143 668 196 35 7 chr15 73156627 73156771 -30338203 + B1_Mur3 SINE Alu 2 149 0 3 1143 1346 65 16 26 chr15 73156792 73156981 -30337993 - B2_Mm1t SINE B2 -6 187 1 3 1143 273 75 0 0 chr15 73157058 73157098 -30337876 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 3 1143 628 256 0 0 chr15 73157431 73157560 -30337414 - B1F1 SINE Alu -17 132 4 3 1143 493 236 56 9 chr15 73157695 73157802 -30337172 + B1_Mur1 SINE Alu 7 118 -31 3 1143 1290 108 0 35 chr15 73157977 73158178 -30336796 + B2_Mm2 SINE B2 1 194 -1 3 1143 3091 58 10 2 chr15 73158192 73158589 -30336385 + MTB LTR MaLR 1 400 0 3 1143 510 38 38 0 chr15 73159792 73159871 -30335103 + L1Md_F3 LINE L1 6502 6583 -1 3 1143 194 62 31 0 chr15 73160365 73160397 -30334577 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 3 1143 21 71 0 0 chr15 73160603 73160645 -30334329 + AT_rich Low_complexity Low_complexity 1 42 0 3 1143 713 174 56 28 chr15 73160647 73160789 -30334185 - B1_Mur4 SINE Alu -4 146 1 3 1143 528 212 325 36 chr15 73161518 73161684 -30333290 - B3 SINE B2 0 216 3 3 1143 205 51 51 0 chr15 73162200 73162239 -30332735 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 3 1143 780 180 0 8 chr15 73162372 73162495 -30332479 - B1_Mur4 SINE Alu -7 143 22 3 1143 1333 90 5 5 chr15 73162551 73162741 -30332233 - B2_Mm1t SINE B2 -2 191 2 3 1143 398 303 96 66 chr15 73162770 73162915 -30332059 + B3A SINE B2 13 164 -34 3 1143 555 16 0 0 chr15 73162915 73162979 -30331995 + (TA)n Simple_repeat Simple_repeat 1 64 0 3 1143 398 303 96 66 chr15 73162979 73162999 -30331975 + B3A SINE B2 165 183 -15 3 1143 1642 149 164 41 chr15 73163104 73163446 -30331528 - ORR1C2 LTR MaLR 0 384 1 3 1143 925 329 27 55 chr15 73163491 73163784 -30331190 - B4A SINE B4 0 292 8 3 1143 260 311 0 15 chr15 73163813 73163947 -30331027 + A-rich Low_complexity Low_complexity 2 133 0 3 1143 1329 79 11 6 chr15 73163969 73164148 -30330826 + B2_Mm2 SINE B2 2 181 -14 3 1143 1123 247 93 81 chr15 73165618 73166089 -30328885 + RLTR12B LTR ERVK 42 518 -10 3 1143 219 88 0 0 chr15 73166169 73166203 -30328771 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1143 374 328 22 0 chr15 73167341 73167475 -30327499 - MLT1D LTR MaLR 0 505 369 3 1143 1956 178 18 31 chr15 73167535 73167924 -30327050 + RMER10B LTR ERVL 15 398 0 3 1143 222 150 0 0 chr15 73168002 73168042 -30326932 + (T)n Simple_repeat Simple_repeat 1 40 0 3 1143 612 211 105 0 chr15 73168044 73168177 -30326797 - B1_Mus1 SINE Alu -1 147 1 3 1143 723 39 9 19 chr15 73168192 73168297 -30326677 + (TTCTC)n Simple_repeat Simple_repeat 5 108 0 3 1143 625 201 90 51 chr15 73168307 73168485 -30326489 - B2_Mm2 SINE B2 -9 186 2 3 1143 867 70 0 0 chr15 73168590 73168705 -30326269 + (GAAA)n Simple_repeat Simple_repeat 3 117 0 3 1143 189 0 0 0 chr15 73168705 73168725 -30326249 + (TGGA)n Simple_repeat Simple_repeat 2 22 0 3 1143 1608 66 0 26 chr15 73168909 73169141 -30325833 - L1Md_F2 LINE L1 -12 6570 6345 3 1143 1473 63 0 0 chr15 73169141 73169332 -30325642 + L1Md_F2 LINE L1 6145 6335 -247 3 1143 1027 119 13 0 chr15 73169406 73169557 -30325417 + B2_Mm2 SINE B2 1 153 -42 3 1143 372 243 29 0 chr15 73169709 73169779 -30325195 - B3A SINE B2 -41 157 86 3 1143 241 258 174 33 chr15 73169813 73169905 -30325069 - B3 SINE B2 -5 211 107 3 1143 2081 249 154 42 chr15 73169951 73170651 -30324323 - Tigger1 DNA MER2_type -1340 1078 294 3 1143 1643 84 45 16 chr15 73170651 73170894 -30324080 + L1Md_F2 LINE L1 6321 6570 -12 3 1143 2081 249 154 42 chr15 73170894 73170985 -30323989 - Tigger1 DNA MER2_type -2125 293 198 3 1143 378 108 0 0 chr15 73170985 73171050 -30323924 + (GA)n Simple_repeat Simple_repeat 1 65 0 3 1143 959 70 0 0 chr15 73172797 73172925 -30322049 + B1_Mus1 SINE Alu 1 128 -20 3 1143 459 0 0 0 chr15 73172927 73172978 -30321996 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1143 225 174 28 42 chr15 73172999 73173050 -30321924 + (TAA)n Simple_repeat Simple_repeat 3 54 0 3 1143 1180 76 81 17 chr15 73173050 73173223 -30321751 + B2_Mm1t SINE B2 1 184 -9 3 1143 225 174 28 42 chr15 73173223 73173243 -30321731 + (TAA)n Simple_repeat Simple_repeat 1 19 0 3 1143 714 301 45 15 chr15 73174254 73174520 -30320454 + B4A SINE B4 1 274 -18 3 1143 417 238 19 29 chr15 73174578 73174682 -30320292 - Lx9 LINE L1 -470 7174 7072 3 1143 352 255 231 4 chr15 73174706 73174961 -30320013 + Lx9 LINE L1 7323 7635 -9 3 1143 1000 118 5 118 chr15 73174968 73175179 -30319795 - B2_Mm2 SINE B2 -7 188 2 3 1143 378 0 0 0 chr15 73175191 73175233 -30319741 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1143 240 307 51 19 chr15 73175395 73175551 -30319423 + L1M4 LINE L1 5571 5731 -447 3 1143 725 116 6 127 chr15 73175562 73175720 -30319254 - ORR1C1 LTR MaLR -237 141 3 3 1143 396 322 134 11 chr15 73175986 73176247 -30318727 + L1M5 LINE L1 2742 3034 -3112 3 1143 1576 32 11 11 chr15 73176254 73176445 -30318529 + B2_Mm1a SINE B2 1 191 -2 3 1143 507 111 0 22 chr15 73176449 73176541 -30318433 + L1_Mus4 LINE L1 6541 6630 -6 3 1143 308 336 20 93 chr15 73176891 73177042 -30317932 + B1F SINE Alu 1 140 -9 3 1143 951 316 57 28 chr15 73177060 73177302 -30317672 + Lx8 LINE L1 6912 7154 -319 3 1143 2078 127 9 3 chr15 73177302 73177626 -30317348 - ORR1A3 LTR MaLR 0 326 1 3 1143 951 316 57 28 chr15 73177626 73177924 -30317050 + Lx8 LINE L1 7155 7468 -5 3 1143 783 202 214 0 chr15 73177956 73178134 -30316840 + B3 SINE B2 1 216 0 3 1143 335 264 39 62 chr15 73178321 73178450 -30316524 + B1_Mur2 SINE Alu 6 131 -18 3 1143 287 205 471 0 chr15 73178425 73178534 -30316440 + B4A SINE B4 43 202 -90 3 1143 296 24 24 0 chr15 73178818 73178859 -30316115 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 3 1143 351 212 62 12 chr15 73178931 73179012 -30315962 + B4A SINE B4 202 286 -6 3 1143 228 226 109 31 chr15 73179310 73179374 -30315600 + AluF_3 SINE Alu 144 212 -99 3 1143 625 165 35 0 chr15 73179422 73179537 -30315437 + B3 SINE B2 98 216 0 3 1143 371 278 52 26 chr15 73179745 73179900 -30315074 - MER5C DNA MER1_type -64 249 91 3 1143 222 118 0 0 chr15 73180962 73180996 -30313978 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1143 199 302 95 0 chr15 73181494 73181557 -30313417 - MIR SINE MIR -187 75 7 3 1143 211 271 0 106 chr15 73182173 73182239 -30312735 - L2c LINE L2 -58 3329 3271 3 1143 26 0 0 0 chr15 73182259 73182285 -30312689 + AT_rich Low_complexity Low_complexity 1 26 0 3 1143 236 292 52 47 chr15 73182375 73182587 -30312387 + L1M5 LINE L1 3613 3825 -2321 3 1143 894 169 455 0 chr15 73182604 73182866 -30312108 - ORR1C2 LTR MaLR -2 382 1 3 1143 3611 174 39 36 chr15 73182866 73183617 -30311357 - ORR1C2-int LTR MaLR 0 1509 757 3 1143 1485 211 29 90 chr15 73183605 73183695 -30311279 - ORR1C2-int LTR MaLR -1155 354 263 3 1143 1306 102 21 0 chr15 73183695 73183882 -30311092 - B2_Mm2 SINE B2 -3 192 2 3 1143 1485 211 29 90 chr15 73183882 73184167 -30310807 - ORR1C2-int LTR MaLR -1247 262 2 3 1143 1787 170 39 45 chr15 73184172 73184554 -30310420 - ORR1C2 LTR MaLR -4 380 1 3 1143 372 285 153 48 chr15 73184702 73184955 -30310019 + L1MC LINE L1 3898 4175 -1968 3 1143 1255 102 11 0 chr15 73185540 73185716 -30309258 + B2_Mm1t SINE B2 2 179 -14 3 1143 304 202 26 65 chr15 73185716 73185830 -30309144 + B2_Mm2 SINE B2 2 109 -107 3 1143 216 0 0 0 chr15 73185846 73185870 -30309104 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 3 1143 332 319 38 38 chr15 73185977 73186163 -30308811 + MIR SINE MIR 21 206 -56 3 1143 315 71 0 0 chr15 73186282 73186324 -30308650 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1143 875 180 66 89 chr15 73186340 73186553 -30308421 + B3 SINE B2 3 210 -6 3 1143 183 42 0 0 chr15 73186733 73186757 -30308217 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 1143 918 98 105 0 chr15 73186779 73186912 -30308062 + B1_Mus1 SINE Alu 2 148 0 3 1143 187 343 134 25 chr15 73187478 73187717 -30307257 - L2 LINE L2 -357 3062 2798 3 1143 492 221 35 9 chr15 73192920 73193034 -30301940 + PB1D10 SINE Alu 1 117 0 3 1143 24 0 0 0 chr15 73194211 73194235 -30300739 + AT_rich Low_complexity Low_complexity 1 24 0 3 1143 841 250 26 11 chr15 73194484 73194674 -30300300 - B3A SINE B2 -4 194 2 3 1143 1172 62 7 0 chr15 73194744 73194890 -30300084 + B1_Mus2 SINE Alu 1 147 0 3 1143 240 100 0 0 chr15 73194891 73194931 -30300043 + (A)n Simple_repeat Simple_repeat 1 40 0 3 1143 710 146 299 0 chr15 73195234 73195378 -30299596 + B2_Mm2 SINE B2 2 188 -7 3 1143 386 255 24 127 chr15 73195742 73195908 -30299066 - MIR SINE MIR -9 253 105 3 1143 1728 225 26 23 chr15 73196545 73196973 -30298001 + RLTR18-int LTR ERVK 3 431 -4930 3 1143 5514 166 77 20 chr15 73197580 73197895 -30297079 + RLTR18-int LTR ERVK 4118 4468 -893 3 1143 1223 74 97 0 chr15 73197895 73198070 -30296904 + B2_Mm2 SINE B2 2 193 -2 3 1143 5514 166 77 20 chr15 73198070 73198930 -30296044 + RLTR18-int LTR ERVK 4469 5361 0 3 1143 38 0 0 0 chr15 73198930 73198968 -30296006 + AT_rich Low_complexity Low_complexity 1 38 0 3 1143 2572 154 73 47 chr15 73198976 73199467 -30295507 + RLTR18B LTR ERVK 1 504 -8 3 1143 180 0 0 0 chr15 73199602 73199622 -30295352 + (GA)n Simple_repeat Simple_repeat 1 20 0 3 1143 24 0 0 0 chr15 73200434 73200458 -30294516 + AT_rich Low_complexity Low_complexity 1 24 0 4 1143 408 301 37 8 chr15 73200467 73200601 -30294373 + B1F1 SINE Alu 2 139 -10 4 1143 216 86 0 0 chr15 73200613 73200648 -30294326 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 4 1143 24 85 0 0 chr15 73200668 73200727 -30294247 + AT_rich Low_complexity Low_complexity 1 59 0 4 1143 1175 99 0 0 chr15 73200813 73200975 -30293999 + B2_Mm2 SINE B2 15 176 -19 4 1143 1136 59 0 0 chr15 73201112 73201247 -30293727 - B1_Mus2 SINE Alu -11 136 2 4 1143 1171 61 0 0 chr15 73201759 73201907 -30293067 + B1_Mus1 SINE Alu 1 148 0 4 1143 238 232 228 18 chr15 73202028 73202142 -30292832 + L1MB8 LINE L1 5798 5935 -243 4 1143 457 266 58 80 chr15 73202660 73202848 -30292126 + RLTR23 LTR ERV1 247 430 0 4 1143 216 193 0 0 chr15 73203179 73203215 -30291759 + A-rich Low_complexity Low_complexity 1 36 0 4 1143 1183 48 7 0 chr15 73203215 73203361 -30291613 + B1_Mus2 SINE Alu 1 147 0 4 1143 216 193 0 0 chr15 73203361 73203381 -30291593 + A-rich Low_complexity Low_complexity 37 56 0 4 1143 460 265 117 6 chr15 73203470 73203633 -30291341 + B3A SINE B2 2 182 -16 4 1143 2307 135 62 43 chr15 73203655 73204121 -30290853 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1143 25675 7 1 0 chr15 73204121 73207075 -30287899 - IAPEz-int LTR ERVK 0 6481 3525 4 1143 886 73 24 0 chr15 73207075 73207198 -30287776 - IAPEz-int LTR ERVK -2770 4910 4785 4 1143 1741 111 4 4 chr15 73207195 73207457 -30287517 - IAPEz-int LTR ERVK -5183 2497 2236 4 1143 424 38 0 0 chr15 73207456 73207509 -30287465 - IAPEz-int LTR ERVK -5070 1411 1359 4 1143 4132 61 68 23 chr15 73207509 73208127 -30286847 - IAPEz-int LTR ERVK -5819 662 17 4 1143 2292 133 63 43 chr15 73208150 73208612 -30286362 - IAPLTR2_Mm LTR ERVK 0 475 5 4 1143 234 0 0 0 chr15 73208613 73208639 -30286335 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1143 21 57 0 0 chr15 73209154 73209189 -30285785 + AT_rich Low_complexity Low_complexity 1 35 0 4 1143 242 279 191 64 chr15 73209249 73209406 -30285568 + MTEa LTR MaLR 136 312 -67 4 1143 458 254 145 0 chr15 73209819 73209957 -30285017 - RSINE1 SINE B4 -6 159 2 4 1143 806 206 339 18 chr15 73210275 73210552 -30284422 - ORR1D2 LTR MaLR 0 370 5 4 1143 2729 67 3 3 chr15 73210689 73211035 -30283939 + ORR1A1 LTR MaLR 1 346 0 4 1143 360 276 60 35 chr15 73211438 73211637 -30283337 + L1MC4 LINE L1 7431 7634 -408 4 1143 1151 62 0 7 chr15 73212064 73212210 -30282764 + B1_Mus1 SINE Alu 4 148 0 4 1143 652 216 289 13 chr15 73212299 73212444 -30282530 - RMER17C LTR ERVK -21 389 190 4 1143 735 71 0 0 chr15 73212444 73212542 -30282432 + (GGGA)n Simple_repeat Simple_repeat 2 99 0 4 1143 652 216 289 13 chr15 73212542 73212701 -30282273 - RMER17C LTR ERVK -221 189 1 4 1143 362 286 0 12 chr15 73212701 73212767 -30282207 + B1F2 SINE Alu 57 121 -28 4 1143 808 260 148 39 chr15 73212874 73213158 -30281816 + MTE2a LTR MaLR 64 378 -1 4 1143 286 250 18 0 chr15 73213255 73213311 -30281663 - ID4 SINE ID -3 80 24 4 1143 370 228 87 19 chr15 73213430 73213533 -30281441 - PB1D7 SINE Alu -10 110 1 4 1143 557 335 54 12 chr15 73213535 73213777 -30281197 - Kanga1c DNA Tc2 -396 333 82 4 1143 266 221 158 59 chr15 73214071 73214172 -30280802 - MTEa LTR MaLR -11 410 298 4 1143 413 231 156 9 chr15 73214265 73214374 -30280600 - RSINE1 SINE B4 -4 161 37 4 1143 841 123 148 7 chr15 73214622 73214777 -30280197 - B2_Mm2 SINE B2 -18 177 1 4 1143 415 354 105 9 chr15 73214825 73215281 -30279693 - L1ME1 LINE L1 -317 5862 5363 4 1143 347 283 97 48 chr15 73215369 73215514 -30279460 - RSINE1 SINE B4 -12 153 2 4 1143 225 271 59 8 chr15 73215537 73215556 -30279418 + ORR1B1-int LTR MaLR 630 654 -855 4 1143 672 139 61 0 chr15 73215556 73215671 -30279303 + B1_Mm SINE Alu 1 122 -25 4 1143 383 271 115 8 chr15 73215671 73215685 -30279289 + ID_B1 SINE B4 82 224 0 4 1143 771 208 159 17 chr15 73216001 73216290 -30278684 + Lx9 LINE L1 7308 7637 -7 4 1143 1523 48 0 16 chr15 73216329 73216519 -30278455 + B2_Mm1a SINE B2 1 187 -6 4 1143 563 211 41 0 chr15 73216522 73216645 -30278329 - MTEa LTR MaLR -45 334 207 4 1143 794 189 35 0 chr15 73216650 73216793 -30278181 + B1_Mur1 SINE Alu 2 149 0 4 1143 1234 93 33 0 chr15 73216799 73216981 -30277993 + B2_Mm1t SINE B2 1 188 -5 4 1143 1004 164 198 0 chr15 73216983 73217160 -30277814 + B3 SINE B2 5 216 0 4 1143 750 157 0 0 chr15 73217168 73217308 -30277666 + GA-rich Low_complexity Low_complexity 2 141 0 4 1143 721 333 26 0 chr15 73217308 73217500 -30277474 - MTEa LTR MaLR -163 216 20 4 1143 214 325 35 46 chr15 73217500 73217587 -30277387 - B4A SINE B4 -150 142 57 4 1143 1453 68 16 0 chr15 73217904 73218096 -30276878 + B2_Mm2 SINE B2 1 195 0 4 1143 1080 68 0 0 chr15 73218149 73218281 -30276693 + B1_Mus2 SINE Alu 2 133 -14 4 1143 219 186 0 0 chr15 73218282 73218325 -30276649 + A-rich Low_complexity Low_complexity 2 44 0 4 1143 448 145 66 0 chr15 73218372 73218448 -30276526 + B1_Mur3 SINE Alu 66 146 -3 4 1143 699 234 7 0 chr15 73218512 73218649 -30276325 + B1_Mur1 SINE Alu 6 143 -6 4 1143 682 207 93 17 chr15 73218654 73218826 -30276148 + B3A SINE B2 8 192 -6 4 1143 382 143 0 0 chr15 73219917 73219973 -30275001 - B3 SINE B2 -160 56 1 4 1143 225 0 0 0 chr15 73220686 73220711 -30274263 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1143 2548 143 126 174 chr15 73220782 73221504 -30273470 + RMER6C LTR ERVK 1 687 -3 4 1143 1156 48 128 35 chr15 73221504 73221676 -30273298 + B2_Mm2 SINE B2 1 188 -7 4 1143 441 340 88 7 chr15 73221848 73221996 -30272978 + RSINE1 SINE B4 4 163 -2 4 1143 225 268 40 40 chr15 73222209 73222283 -30272691 + MT2B LTR ERVL 187 260 -341 4 1143 610 189 9 0 chr15 73222219 73222325 -30272649 + B1F2 SINE Alu 43 149 0 4 1143 1145 79 99 28 chr15 73222336 73222518 -30272456 + B2_Mm2 SINE B2 1 195 0 4 1143 486 279 48 0 chr15 73222534 73222681 -30272293 + RSINE1 SINE B4 2 155 -10 4 1143 793 233 41 0 chr15 73223150 73223296 -30271678 + RSINE1 SINE B4 8 159 -6 4 1143 2122 178 51 57 chr15 73223572 73223698 -30271276 + MTC LTR MaLR 6 107 -314 4 1143 540 210 0 48 chr15 73223698 73223823 -30271151 - PB1D9 SINE Alu -1 119 1 4 1143 2122 168 55 60 chr15 73223823 73224126 -30270848 + MTC LTR MaLR 108 421 0 4 1143 211 246 132 44 chr15 73224266 73224334 -30270640 + B3A SINE B2 9 82 -116 4 1143 299 258 16 16 chr15 73224299 73224362 -30270612 + B4A SINE B4 48 110 -182 4 1143 353 311 19 37 chr15 73224368 73224475 -30270499 + Tigger7 DNA MER2_type 2386 2490 -1 4 1143 879 78 138 8 chr15 73224489 73224619 -30270355 + B1_Mus1 SINE Alu 1 147 -1 4 1143 268 288 128 56 chr15 73226305 73226430 -30268544 - Lx8 LINE L1 -305 7168 7035 4 1143 307 293 213 11 chr15 73226449 73226632 -30268342 + Lx8 LINE L1 7248 7467 -6 4 1143 805 228 49 0 chr15 73226699 73226883 -30268091 + B3 SINE B2 5 197 -19 4 1143 995 198 41 0 chr15 73227109 73227306 -30267668 - B3 SINE B2 -11 205 1 4 1143 2252 185 222 21 chr15 73227489 73228020 -30266954 + RMER1B Other Other 1 638 -428 4 1143 4544 2 0 0 chr15 73228033 73228523 -30266451 - L1Md_A LINE L1 0 6582 6093 4 1143 3970 0 0 0 chr15 73228523 73228955 -30266019 + L1Md_A LINE L1 5635 6066 -516 4 1143 2151 155 115 5 chr15 73228952 73229342 -30265632 + RMER1B Other Other 625 1057 -9 4 1143 203 371 0 0 chr15 73229768 73229857 -30265117 - MIRm SINE MIR -108 168 80 4 1143 907 171 148 10 chr15 73229965 73230144 -30264830 + B3 SINE B2 6 188 -28 4 1143 2882 184 144 47 chr15 73230163 73230437 -30264537 + RLTR40 LTR ERVK 1 282 -535 4 1143 567 53 0 0 chr15 73230437 73230512 -30264462 + (TG)n Simple_repeat Simple_repeat 2 76 0 4 1143 2882 184 144 47 chr15 73230512 73230967 -30264007 + RLTR40 LTR ERVK 283 800 -17 4 1143 1419 49 32 21 chr15 73230968 73231155 -30263819 - B2_Mm2 SINE B2 -6 189 1 4 1143 740 215 15 15 chr15 73231540 73231677 -30263297 + B1_Mur1 SINE Alu 3 139 -10 4 1143 294 148 0 0 chr15 73232250 73232304 -30262670 + (TGGG)n Simple_repeat Simple_repeat 3 56 0 4 1143 749 170 44 15 chr15 73232304 73232441 -30262533 - B1_Mur3 SINE Alu 0 149 9 4 1143 252 0 0 0 chr15 73232450 73232478 -30262496 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1143 415 243 75 0 chr15 73232493 73232600 -30262374 - B1F SINE Alu -13 136 22 4 1143 291 333 24 24 chr15 73232735 73232818 -30262156 + ID_B1 SINE B4 79 161 -63 4 1143 369 324 20 0 chr15 73232748 73232850 -30262124 + PB1D10 SINE Alu 9 112 -5 4 1143 372 305 95 12 chr15 73233259 73233428 -30261546 + L1MD2 LINE L1 12 194 -6353 4 1143 1622 27 32 0 chr15 73233593 73233780 -30261194 + B2_Mm1a SINE B2 1 193 0 4 1143 1105 68 14 0 chr15 73233789 73233935 -30261039 + B1_Mus1 SINE Alu 1 148 0 4 1143 243 211 0 37 chr15 73234666 73234720 -30260254 + LTR33A LTR ERVL 457 508 -12 4 1143 1495 73 5 0 chr15 73234754 73234945 -30260029 - B2_Mm1t SINE B2 0 193 2 4 1143 311 254 60 26 chr15 73235065 73235182 -30259792 + L2 LINE L2 2496 2616 -803 4 1143 294 73 0 0 chr15 73235390 73235431 -30259543 + (A)n Simple_repeat Simple_repeat 1 41 0 4 1143 212 269 209 0 chr15 73235594 73235661 -30259313 - PB1 SINE Alu -4 123 43 4 1143 992 219 27 0 chr15 73235948 73236131 -30258843 - B3 SINE B2 -27 189 2 4 1143 339 287 11 11 chr15 73236147 73236235 -30258739 + MER77 LTR ERVL 53 140 -467 4 1143 571 147 17 76 chr15 73236234 73236352 -30258622 + PB1D9 SINE Alu 10 120 0 4 1143 674 286 66 17 chr15 73236655 73236908 -30258066 + MER77 LTR ERVL 206 515 -92 4 1143 410 127 0 14 chr15 73236998 73237070 -30257904 + (TTCTCC)n Simple_repeat Simple_repeat 5 75 0 4 1143 263 260 51 13 chr15 73237212 73237290 -30257684 + PB1D7 SINE Alu 30 110 -10 4 1143 258 32 0 0 chr15 73237290 73237321 -30257653 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1143 671 205 8 0 chr15 73237326 73237443 -30257531 + PB1D9 SINE Alu 2 119 -1 4 1143 249 207 0 0 chr15 73237713 73237771 -30257203 + T-rich Low_complexity Low_complexity 1 58 0 4 1143 30 27 0 0 chr15 73237806 73237843 -30257131 + AT_rich Low_complexity Low_complexity 1 37 0 5 1143 404 239 144 55 chr15 73238753 73238899 -30256075 + RSINE1 SINE B4 3 161 -4 5 1143 616 64 0 0 chr15 73239168 73239246 -30255728 + B1_Mus2 SINE Alu 1 78 -69 5 1143 363 204 10 111 chr15 73239170 73239269 -30255705 + MT2B LTR ERVL 167 255 -346 5 1143 485 45 0 0 chr15 73239404 73239470 -30255504 + L1_Mus2 LINE L1 6501 6566 0 5 1143 1619 27 11 0 chr15 73240892 73241080 -30253894 + B2_Mm1a SINE B2 2 191 -2 5 1143 1150 88 0 0 chr15 73241089 73241236 -30253738 + B1_Mm SINE Alu 1 147 0 5 1143 1231 34 0 20 chr15 73242183 73242333 -30252641 + B1_Mus2 SINE Alu 1 147 0 5 1143 842 181 15 0 chr15 73242432 73242565 -30252409 + B1_Mus1 SINE Alu 1 135 -13 5 1143 270 116 0 0 chr15 73242609 73242652 -30252322 + (GGGA)n Simple_repeat Simple_repeat 3 45 0 5 1143 283 314 35 0 chr15 73242712 73242798 -30252176 + ID_B1 SINE B4 84 172 -52 5 1143 276 276 99 44 chr15 73242780 73242871 -30252103 + ID_B1 SINE B4 112 207 -17 5 1143 1467 68 11 0 chr15 73242886 73243077 -30251897 + B2_Mm1t SINE B2 1 193 0 5 1143 827 237 137 84 chr15 73243118 73243477 -30251497 - MTE2a LTR MaLR -1 378 1 5 1143 356 280 18 18 chr15 73244085 73244194 -30250780 + MER58B DNA MER1_type 106 214 -127 5 1143 251 175 0 0 chr15 73244456 73244496 -30250478 - ID_B1 SINE B4 -8 216 177 5 1143 1398 81 27 0 chr15 73245132 73245318 -30249656 - B2_Mm2 SINE B2 -3 192 2 5 1143 450 0 0 0 chr15 73245891 73245941 -30249033 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1143 296 172 152 30 chr15 73245969 73246035 -30248939 + B1_Mur1 SINE Alu 73 146 -3 5 1143 212 121 79 79 chr15 73246204 73246223 -30248751 + B2_Mm1t SINE B2 1 38 -155 5 1143 227 118 0 0 chr15 73246223 73246257 -30248717 + 4.5SRNA scRNA scRNA 53 86 -8 5 1143 639 49 0 0 chr15 73246232 73246313 -30248661 + B1_Mus2 SINE Alu 65 145 -2 5 1143 231 235 0 0 chr15 73246315 73246366 -30248608 + A-rich Low_complexity Low_complexity 1 51 0 5 1143 277 238 11 35 chr15 73247226 73247313 -30247661 + GA-rich Low_complexity Low_complexity 5 89 0 5 1143 325 269 13 0 chr15 73248216 73248294 -30246680 - ID4 SINE ID -1 82 4 5 1143 955 79 174 47 chr15 73248761 73248933 -30246041 + B2_Mm2 SINE B2 2 195 0 5 1143 873 149 180 5 chr15 73249098 73249287 -30245687 + URR1A DNA MER1_type 1 222 -4 5 1143 1074 67 15 0 chr15 73249287 73249421 -30245553 + B1_Mus1 SINE Alu 1 136 -12 5 1143 720 64 0 0 chr15 73249421 73249515 -30245459 + (GAAA)n Simple_repeat Simple_repeat 3 96 0 5 1143 262 258 136 0 chr15 73250983 73251049 -30243925 - ID4 SINE ID -2 81 7 5 1143 302 82 0 39 chr15 73251106 73251157 -30243817 + (ATG)n Simple_repeat Simple_repeat 3 51 0 5 1143 336 289 81 75 chr15 73251165 73251326 -30243648 + RSINE1 SINE B4 4 165 0 5 1143 186 71 0 0 chr15 73252949 73252977 -30241997 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1143 27 81 0 0 chr15 73253232 73253294 -30241680 + GC_rich Low_complexity Low_complexity 1 62 0 5 1143 209 125 0 0 chr15 73253939 73253971 -30241003 - MIR SINE MIR -122 140 109 5 1143 828 221 52 29 chr15 73254654 73254864 -30240110 - B3 SINE B2 0 216 2 5 1143 577 246 15 30 chr15 73254869 73254885 -30240089 - ID_B1 SINE B4 0 224 212 5 1143 207 0 0 0 chr15 73254885 73254908 -30240066 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 5 1143 577 246 15 30 chr15 73254908 73255025 -30239949 - ID_B1 SINE B4 -13 211 93 5 1143 343 315 22 0 chr15 73254943 73255035 -30239939 - PB1D10 SINE Alu -22 95 2 5 1143 258 248 241 43 chr15 73255168 73255371 -30239603 + L2a LINE L2 3180 3426 0 5 1143 406 296 141 80 chr15 73255500 73255809 -30239165 + MLT1H1 LTR MaLR 1 371 -178 5 1143 784 89 194 0 chr15 73255908 73256032 -30238942 + B1_Mus1 SINE Alu 1 148 0 5 1143 203 231 55 86 chr15 73256140 73256247 -30238727 - MIRb SINE MIR -37 231 117 5 1143 370 214 74 46 chr15 73256640 73256748 -30238226 + MT2B LTR ERVL 168 278 -323 5 1143 678 136 0 28 chr15 73256659 73256765 -30238209 + B1_Mm SINE Alu 35 137 -10 5 1143 276 248 79 167 chr15 73256665 73256791 -30238183 + B4 SINE B4 126 240 -52 5 1143 212 346 44 37 chr15 73256915 73257050 -30237924 + MIRm SINE MIR 18 153 -123 5 1143 738 279 117 12 chr15 73257238 73257485 -30237489 + B4 SINE B4 2 274 -18 5 1143 216 0 0 0 chr15 73257492 73257516 -30237458 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1143 1194 68 0 0 chr15 73257577 73257724 -30237250 + B1_Mus2 SINE Alu 1 147 0 5 1143 195 129 0 0 chr15 73257725 73257756 -30237218 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 5 1143 414 172 269 0 chr15 73257813 73257906 -30237068 + PB1D9 SINE Alu 2 119 -1 5 1143 180 0 0 0 chr15 73258029 73258049 -30236925 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 5 1143 1187 68 0 0 chr15 73258049 73258195 -30236779 - B1_Mus1 SINE Alu -2 146 1 5 1143 281 276 18 0 chr15 73258198 73258275 -30236699 - B1F SINE Alu -45 104 23 5 1143 279 196 36 0 chr15 73258492 73258548 -30236426 - B2_Mm2 SINE B2 -91 104 47 5 1143 1272 90 11 17 chr15 73258562 73258743 -30236231 - B2_Mm2 SINE B2 -14 181 2 5 1143 519 300 127 11 chr15 73259463 73259746 -30235228 - L1MC3 LINE L1 -331 7454 7139 5 1143 1135 44 15 0 chr15 73260857 73260993 -30233981 + B1_Mus2 SINE Alu 1 138 -9 5 1143 243 0 0 0 chr15 73260993 73261020 -30233954 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1143 378 321 9 9 chr15 73261270 73261383 -30233591 + PB1D10 SINE Alu 1 113 -4 5 1143 720 298 112 26 chr15 73261388 73261657 -30233317 + B4A SINE B4 1 292 0 5 1143 201 39 0 0 chr15 73261812 73261838 -30233136 + (CAGA)n Simple_repeat Simple_repeat 2 27 0 5 1143 524 262 66 20 chr15 73262669 73262821 -30232153 - MIR SINE MIR -72 190 32 5 1143 231 167 0 0 chr15 73263073 73263115 -30231859 + (CTCTG)n Simple_repeat Simple_repeat 5 46 0 5 1143 233 264 26 65 chr15 73264208 73264285 -30230689 - RMER15 LTR ERVL -154 421 348 5 1143 189 107 0 0 chr15 73265009 73265037 -30229937 + (TCC)n Simple_repeat Simple_repeat 1 28 0 5 1143 978 150 0 7 chr15 73265076 73265224 -30229750 - B1_Mus1 SINE Alu 0 148 2 5 1143 252 283 73 42 chr15 73266400 73266496 -30228478 - MTEa LTR MaLR -4 375 277 5 1143 325 234 15 0 chr15 73266591 73266728 -30228246 + GA-rich Low_complexity Low_complexity 2 140 0 5 1143 492 146 37 179 chr15 73266766 73266809 -30228165 - ORR1D2 LTR MaLR 0 370 332 5 1143 1005 135 14 0 chr15 73266809 73266957 -30228017 + B1_Mur4 SINE Alu 1 150 0 5 1143 420 37 0 0 chr15 73266959 73267013 -30227961 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1143 492 146 37 179 chr15 73267013 73267100 -30227874 - ORR1D2 LTR MaLR -39 331 256 5 1143 369 0 0 0 chr15 73267107 73267148 -30227826 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1143 486 0 0 0 chr15 73267148 73267201 -30227773 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 1143 694 308 85 38 chr15 73267236 73267472 -30227502 - B4A SINE B4 -44 248 2 5 1143 297 318 78 86 chr15 73267500 73267744 -30227230 + ORR1E LTR MaLR 74 315 -44 5 1143 294 120 120 0 chr15 73267872 73267922 -30227052 - B1_Mur2 SINE Alu -12 137 82 5 1143 278 314 165 37 chr15 73267893 73268002 -30226972 + B4 SINE B4 170 292 0 5 1143 640 203 61 61 chr15 73268070 73268217 -30226757 + B1F SINE Alu 1 147 -2 5 142 1537 63 16 0 chr15 73269202 73269393 -30225581 + B2_Mm2 SINE B2 2 195 0 5 1144 1239 54 0 0 chr15 73269465 73269612 -30225362 - B1_Mm SINE Alu 0 147 1 5 1144 1754 185 58 39 chr15 73269950 73270384 -30224590 + RMER10A LTR ERVL 1 442 0 5 1144 219 69 0 0 chr15 73270820 73270849 -30224125 + (TATTG)n Simple_repeat Simple_repeat 2 30 0 5 1144 429 250 101 1 chr15 73270941 73271051 -30223923 - PB1 SINE Alu -2 125 6 5 1144 231 228 35 0 chr15 73271596 73271653 -30223321 + MLT1C LTR MaLR 371 429 -38 5 1144 1422 73 10 10 chr15 73271929 73272123 -30222851 - B2_Mm2 SINE B2 0 195 2 5 1144 877 188 0 0 chr15 73272448 73272586 -30222388 + B1_Mus2 SINE Alu 3 140 -7 5 1144 300 137 0 0 chr15 73272586 73272637 -30222337 + (AGGGGG)n Simple_repeat Simple_repeat 5 55 0 5 1144 1014 123 6 16 chr15 73272637 73272819 -30222155 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 5 1144 297 0 0 0 chr15 73274218 73274251 -30220723 + (CCTAG)n Simple_repeat Simple_repeat 4 36 0 5 1144 1143 89 0 0 chr15 73274630 73274776 -30220198 - B1_Mus2 SINE Alu 0 147 2 5 1144 844 103 0 0 chr15 73274778 73274894 -30220080 - B1_Mus2 SINE Alu 0 147 32 5 1144 1533 57 16 10 chr15 73274907 73275101 -30219873 - B2_Mm2 SINE B2 0 195 1 5 1144 928 211 22 78 chr15 73275180 73275411 -30219563 + ID_B1 SINE B4 1 218 -6 5 1144 879 200 0 7 chr15 73275468 73275614 -30219360 + B3 SINE B2 1 145 -71 5 1144 225 154 0 0 chr15 73275616 73275655 -30219319 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1144 865 167 49 6 chr15 73275656 73275819 -30219155 - B2_Mm2 SINE B2 -25 170 1 5 1144 267 342 0 0 chr15 73275898 73275971 -30219003 + ID SINE ID 1 73 -151 5 1144 369 0 0 0 chr15 73276465 73276506 -30218468 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1144 477 0 0 0 chr15 73276506 73276558 -30218416 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 1144 889 217 75 15 chr15 73276656 73276857 -30218117 + ID_B1 SINE B4 5 217 -7 6 1144 612 294 122 86 chr15 73277826 73277968 -30217006 - ID_B1 SINE B4 -2 290 155 6 1144 798 89 0 0 chr15 73277968 73278080 -30216894 + (TTTC)n Simple_repeat Simple_repeat 2 113 0 6 1144 6904 120 31 59 chr15 73278080 73278789 -30216185 - Lx4B LINE L1 -8 7050 6385 6 1144 1149 57 35 0 chr15 73278789 73278930 -30216044 - B1_Mus2 SINE Alu 0 147 2 6 1144 6904 120 31 59 chr15 73278930 73279396 -30215578 - Lx4B LINE L1 -674 6384 5909 6 1144 612 238 158 69 chr15 73279396 73279539 -30215435 - ID_B1 SINE B4 -70 154 5 6 1144 546 241 8 17 chr15 73279550 73279668 -30215306 - B4 SINE B4 -74 218 102 6 1144 814 279 56 27 chr15 73279719 73280095 -30214879 - L1M3 LINE L1 -445 5738 5352 6 1144 426 243 96 10 chr15 73280566 73280670 -30214304 - PB1D10 SINE Alu 0 117 5 6 1144 1108 248 47 30 chr15 73280684 73280983 -30213991 + MTEa LTR MaLR 39 342 -37 6 1144 1497 172 0 98 chr15 73281051 73281252 -30213722 + RMER1B Other Other 742 931 -135 6 1144 1537 27 26 41 chr15 73281252 73281447 -30213527 - B2_Mm1a SINE B2 0 193 2 6 1144 1497 172 0 98 chr15 73281447 73281593 -30213381 + RMER1B Other Other 932 1055 -11 6 1144 241 218 0 52 chr15 73281604 73281662 -30213312 + B3A SINE B2 27 81 -117 6 1144 351 0 0 0 chr15 73281704 73281743 -30213231 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1144 226 355 45 18 chr15 73282565 73282677 -30212297 + MIRc SINE MIR 5 119 -149 6 1144 282 311 47 0 chr15 73283175 73283281 -30211693 + B1_Mur1 SINE Alu 37 147 -2 6 1144 574 151 135 45 chr15 73283293 73283404 -30211570 + B3A SINE B2 3 123 -75 6 1144 995 209 11 0 chr15 73283463 73283650 -30211324 + B3 SINE B2 28 216 0 6 1144 1334 96 37 5 chr15 73283677 73283865 -30211109 + B2_Mm2 SINE B2 2 195 0 6 1144 327 311 13 26 chr15 73284662 73284817 -30210157 + (TG)n Simple_repeat Simple_repeat 2 154 0 6 1144 1536 38 11 16 chr15 73284981 73285168 -30209806 - B2_Mm1a SINE B2 -7 186 1 6 1144 1213 55 7 0 chr15 73285184 73285330 -30209644 + B1_Mm SINE Alu 1 147 0 6 1144 189 0 0 0 chr15 73285330 73285351 -30209623 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1144 209 233 162 14 chr15 73285352 73285426 -30209548 - MIR SINE MIR -157 105 21 6 1144 1251 74 57 11 chr15 73285781 73285958 -30209016 - B2_Mm2 SINE B2 -7 188 4 6 1144 1221 62 7 0 chr15 73287009 73287155 -30207819 + B1_Mus2 SINE Alu 1 147 0 6 1144 706 178 43 22 chr15 73287173 73287311 -30207663 + B1_Mm SINE Alu 1 141 -6 6 1144 564 89 0 0 chr15 73287311 73287390 -30207584 + (GAAA)n Simple_repeat Simple_repeat 1 79 0 6 1144 22 0 0 0 chr15 73287392 73287414 -30207560 + AT_rich Low_complexity Low_complexity 1 22 0 6 1144 255 170 0 0 chr15 73287428 73287475 -30207499 + (CAT)n Simple_repeat Simple_repeat 1 47 0 6 1144 401 233 39 10 chr15 73287993 73288097 -30206877 - PB1D9 SINE Alu -13 107 1 6 1144 262 148 17 85 chr15 73288098 73288157 -30206817 - PB1D7 SINE Alu 0 120 66 6 1144 288 70 0 0 chr15 73288190 73288233 -30206741 + (T)n Simple_repeat Simple_repeat 1 43 0 6 1144 1299 14 7 0 chr15 73288245 73288391 -30206583 - B1_Mus2 SINE Alu 0 147 1 6 1144 303 160 0 0 chr15 73288396 73288446 -30206528 + MuRRS-int LTR ERV1 3749 3798 -892 6 1144 800 41 0 0 chr15 73288482 73288580 -30206394 + B1_Mus2 SINE Alu 50 147 0 6 1144 275 155 0 65 chr15 73288599 73288661 -30206313 + RMER10A LTR ERVL 385 442 0 6 1144 530 248 26 9 chr15 73288661 73288775 -30206199 + RSINE1 SINE B4 48 163 -2 6 1144 218 220 97 119 chr15 73288669 73288803 -30206171 + B2_Mm2 SINE B2 55 185 -10 6 1144 697 248 7 28 chr15 73288894 73289039 -30205935 + B1_Mur1 SINE Alu 1 142 -7 6 1144 803 124 93 0 chr15 73289039 73289168 -30205806 + B1_Mur3 SINE Alu 9 149 0 6 1144 279 190 0 0 chr15 73289175 73289233 -30205741 + GA-rich Low_complexity Low_complexity 3 60 0 6 1144 284 261 16 63 chr15 73289309 73289436 -30205538 + Lx8 LINE L1 7353 7473 0 6 1144 1249 54 0 0 chr15 73289462 73289609 -30205365 + B1_Mus2 SINE Alu 1 147 0 6 1144 201 29 28 56 chr15 73289616 73289652 -30205322 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 6 1144 786 150 23 23 chr15 73289653 73289783 -30205191 - B1_Mus2 SINE Alu -16 131 2 6 1144 812 55 0 9 chr15 73289851 73289962 -30205012 + (TTTC)n Simple_repeat Simple_repeat 3 112 0 6 1144 513 196 33 0 chr15 73290022 73290114 -30204860 - B3A SINE B2 -101 97 3 6 1144 327 267 0 39 chr15 73290433 73290511 -30204463 + Charlie15a DNA MER1_type 96 170 -54 6 1144 295 331 97 43 chr15 73291251 73291437 -30203537 + MIRb SINE MIR 1 196 -72 6 1144 911 168 0 0 chr15 73292049 73292186 -30202788 - B1_Mur4 SINE Alu -13 137 1 6 1144 787 301 30 106 chr15 73292189 73292586 -30202388 - MTE2a LTR MaLR -6 373 7 6 1144 329 245 110 77 chr15 73292586 73292741 -30202233 - RLTR23 LTR ERV1 0 430 271 6 1144 653 214 0 60 chr15 73293099 73293233 -30201741 + B3A SINE B2 2 127 -71 6 1144 473 0 0 17 chr15 73293234 73293292 -30201682 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 1144 204 211 0 0 chr15 73293306 73293377 -30201597 + CT-rich Low_complexity Low_complexity 1 71 0 6 1144 401 284 45 9 chr15 73293402 73293512 -30201462 - PB1D9 SINE Alu 0 120 7 6 1144 1138 36 50 0 chr15 73293972 73294112 -30200862 - B1_Mus2 SINE Alu 0 147 1 6 1144 1433 65 43 0 chr15 73294122 73294307 -30200667 - B2_Mm2 SINE B2 -2 193 1 6 1144 825 140 29 14 chr15 73294310 73294448 -30200526 - B1_Mur3 SINE Alu 0 149 10 6 1144 2875 133 34 32 chr15 73294457 73294626 -30200348 + RLTR24 LTR ERV1 31 198 -331 6 1144 1196 48 0 20 chr15 73294626 73294774 -30200200 + B1_Mus1 SINE Alu 2 146 -2 6 1144 2875 133 34 32 chr15 73294774 73295102 -30199872 + RLTR24 LTR ERV1 199 529 0 6 1144 224 291 99 30 chr15 73295264 73295395 -30199579 + L2c LINE L2 3028 3167 -220 6 1144 420 264 56 8 chr15 73295539 73295665 -30199309 - RMER15 LTR ERVL -64 511 380 6 1144 432 0 0 0 chr15 73295773 73295821 -30199153 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1144 252 0 0 0 chr15 73296687 73296715 -30198259 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 6 1144 284 275 182 67 chr15 73298436 73298705 -30196269 - MLT1C LTR MaLR -32 358 59 6 1144 444 104 0 0 chr15 73298865 73298932 -30196042 + (TG)n Simple_repeat Simple_repeat 1 67 0 6 1144 589 188 16 41 chr15 73299054 73299176 -30195798 - PB1D9 SINE Alu -1 119 1 6 1144 906 207 69 25 chr15 73299195 73299398 -30195576 - B3 SINE B2 -4 212 1 6 1144 1077 256 64 58 chr15 73299399 73299726 -30195248 + MTE2a LTR MaLR 41 369 -10 6 1144 743 304 65 11 chr15 73299789 73300049 -30194925 - MLT1A LTR MaLR -11 363 90 6 1144 1039 87 140 12 chr15 73300168 73300332 -30194642 - B2_Mm1t SINE B2 -8 185 1 6 1144 234 305 168 8 chr15 73300612 73300731 -30194243 + LTR33 LTR ERVL 378 515 0 6 1144 192 233 145 40 chr15 73300850 73300926 -30194048 + MIRm SINE MIR 100 183 -93 6 1144 360 0 0 0 chr15 73301345 73301385 -30193589 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1144 190 326 133 11 chr15 73302053 73302143 -30192831 - MIR SINE MIR -81 181 81 6 1144 1462 85 16 0 chr15 73302410 73302599 -30192375 - B2_Mm2 SINE B2 -2 193 2 6 1144 324 0 0 0 chr15 73303475 73303511 -30191463 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1144 226 296 0 0 chr15 73303914 73303968 -30191006 + ID4_ SINE ID 26 79 -4 6 1144 261 183 131 16 chr15 73304119 73304180 -30190794 - RSINE1 SINE B4 -54 111 44 6 1144 1465 233 76 36 chr15 73304249 73304605 -30190369 - ORR1D2 LTR MaLR 0 370 1 6 1144 210 139 0 0 chr15 73304685 73304721 -30190253 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1144 1172 69 0 0 chr15 73304724 73304868 -30190106 - B1_Mus1 SINE Alu -4 144 1 6 1144 327 113 0 0 chr15 73305445 73305507 -30189467 + (T)n Simple_repeat Simple_repeat 1 62 0 6 1144 1199 63 0 0 chr15 73305507 73305650 -30189324 - B1_Mm SINE Alu 0 147 5 6 1144 397 177 0 37 chr15 73305665 73305747 -30189227 - B3 SINE B2 0 216 138 6 1144 664 284 73 55 chr15 73305701 73305973 -30189001 - B4A SINE B4 -8 284 8 6 1144 773 255 38 0 chr15 73306004 73306161 -30188813 - B3A SINE B2 -35 163 1 6 1144 705 103 239 0 chr15 73306182 73306299 -30188675 - B2_Mm2 SINE B2 -49 146 2 6 1144 1340 80 11 0 chr15 73306438 73306613 -30188361 - B2_Mm1t SINE B2 -14 179 3 6 1144 396 0 0 0 chr15 73306696 73306740 -30188234 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1144 471 262 169 20 chr15 73306746 73306894 -30188080 - B3 SINE B2 -46 170 1 6 1144 290 145 0 31 chr15 73307068 73307132 -30187842 + CT-rich Low_complexity Low_complexity 1 62 0 6 1144 188 34 0 33 chr15 73307141 73307171 -30187803 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 1144 691 200 42 14 chr15 73307171 73307308 -30187666 - B1_Mur2 SINE Alu -3 146 5 6 1144 252 0 0 0 chr15 73307308 73307336 -30187638 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 6 1144 755 249 42 47 chr15 73307339 73307554 -30187420 - B4A SINE B4 -78 214 1 6 1144 245 351 115 0 chr15 73307886 73308060 -30186914 - MIRc SINE MIR -65 203 10 6 1144 979 118 14 14 chr15 73308894 73309040 -30185934 + B1_Mur4 SINE Alu 5 150 0 6 1144 562 197 0 37 chr15 73309064 73309191 -30185783 - B1F SINE Alu -25 122 3 6 1144 295 293 23 103 chr15 73309191 73309238 -30185736 - MT2B2 LTR ERVL -305 278 119 7 1144 580 246 194 28 chr15 73309306 73309486 -30185488 - ID_B1 SINE B4 -10 214 5 7 1144 706 258 73 42 chr15 73309503 73309832 -30185142 - L1M4 LINE L1 -994 5152 4823 7 1144 534 208 37 28 chr15 73309843 73309952 -30185022 - B1_Mur1 SINE Alu 0 149 40 7 1144 233 185 0 53 chr15 73309953 73310010 -30184964 + C-rich Low_complexity Low_complexity 6 59 0 7 1144 252 294 0 0 chr15 73310010 73310061 -30184913 - B1_Mus2 SINE Alu -96 51 1 7 1144 853 246 133 16 chr15 73310165 73310413 -30184561 - B4A SINE B4 -14 278 2 7 1144 32 26 0 0 chr15 73310451 73310490 -30184484 + AT_rich Low_complexity Low_complexity 1 39 0 7 1144 474 173 288 43 chr15 73310494 73310657 -30184317 - B3 SINE B2 -11 205 3 7 1144 837 0 0 0 chr15 73310673 73310766 -30184208 + (TTC)n Simple_repeat Simple_repeat 1 93 0 7 1144 415 206 0 53 chr15 73310980 73311170 -30183804 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1144 620 170 10 0 chr15 73311482 73311582 -30183392 - ID_B1 SINE B4 -2 222 122 7 1144 476 226 75 0 chr15 73311660 73311753 -30183221 - B1_Mur1 SINE Alu -12 137 38 7 1144 1229 36 0 0 chr15 73311776 73311914 -30183060 - B1_Mm SINE Alu -9 138 1 7 1144 358 352 7 21 chr15 73311969 73312114 -30182860 - RSINE1 SINE B4 -17 148 6 7 1144 276 287 0 44 chr15 73312120 73312211 -30182763 - ID_B1 SINE B4 -2 222 136 7 1144 442 226 0 35 chr15 73312211 73312226 -30182748 - B1_Mur1 SINE Alu -2 147 27 7 1144 464 117 13 0 chr15 73312268 73312345 -30182629 + (TG)n Simple_repeat Simple_repeat 2 79 0 7 1144 194 93 17 69 chr15 73312598 73312656 -30182318 + G-rich Low_complexity Low_complexity 3 57 0 7 1144 1372 130 149 80 chr15 73313064 73313365 -30181609 - RLTRETN_Mm LTR ERVK 0 322 1 7 1144 419 297 72 33 chr15 73313441 73313463 -30181511 - B4A SINE B4 -122 170 148 7 1144 553 217 19 0 chr15 73313463 73313569 -30181405 - PB1D9 SINE Alu -11 109 2 7 1144 530 287 24 0 chr15 73313569 73313699 -30181275 - ID_B1 SINE B4 -145 147 10 7 1144 269 316 109 17 chr15 73313713 73313832 -30181142 - MER45B DNA Tip100 -247 793 664 7 1144 1344 63 0 11 chr15 73313998 73314174 -30180800 - B2_Mm2 SINE B2 -21 174 1 7 1144 807 68 34 8 chr15 73314509 73314628 -30180346 + ORR1D1 LTR MaLR 1 122 -252 7 1144 6679 20 0 33 chr15 73314629 73315029 -30179945 - L1Md_F2 LINE L1 -194 6388 5998 7 1144 1632 36 0 15 chr15 73315029 73315225 -30179749 + B2_Mm1t SINE B2 1 193 0 7 1144 6679 28 0 24 chr15 73315225 73315801 -30179173 - L1Md_F2 LINE L1 -585 5997 5439 7 1144 198 184 0 0 chr15 73315837 73315865 -30179109 + T-rich Low_complexity Low_complexity 22 49 0 7 1144 1216 55 0 0 chr15 73315865 73316011 -30178963 - B1_Mus2 SINE Alu 0 147 2 7 1144 198 184 0 0 chr15 73316011 73316031 -30178943 + T-rich Low_complexity Low_complexity 2 21 0 7 1144 247 329 0 13 chr15 73316150 73316213 -30178761 + MTEb LTR MaLR 1 62 -317 7 1144 749 127 0 101 chr15 73316213 73316362 -30178612 + B1_Mm SINE Alu 1 134 -13 7 1144 483 18 0 0 chr15 73316367 73316423 -30178551 + (AGGGGG)n Simple_repeat Simple_repeat 4 59 0 7 1144 180 0 0 0 chr15 73316423 73316443 -30178531 + (GGGAA)n Simple_repeat Simple_repeat 5 24 0 7 1144 544 329 8 88 chr15 73316453 73316713 -30178261 + MT2A LTR ERVL 192 430 -103 7 1144 197 271 21 0 chr15 73316778 73316826 -30178148 - L2a LINE L2 -3 3423 3375 7 1144 195 139 0 0 chr15 73317028 73317064 -30177910 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 7 1144 391 145 101 0 chr15 73317064 73317133 -30177841 - B1_Mur4 SINE Alu -2 148 73 7 1144 255 229 0 79 chr15 73317068 73317144 -30177830 - B4 SINE B4 -72 220 151 7 1144 483 246 26 17 chr15 73317207 73317323 -30177651 - RSINE1 SINE B4 -45 120 4 7 1144 245 292 0 0 chr15 73318691 73318763 -30176211 + (CA)n Simple_repeat Simple_repeat 2 73 0 7 1144 216 97 0 0 chr15 73318816 73318847 -30176127 + (TA)n Simple_repeat Simple_repeat 2 32 0 7 1144 858 168 8 0 chr15 73320714 73320845 -30174129 + B1_Mur2 SINE Alu 1 132 -17 7 1144 283 181 0 27 chr15 73321083 73321157 -30173817 + C-rich Low_complexity Low_complexity 3 74 0 7 1144 253 245 37 84 chr15 73321181 73321288 -30173686 - B1F1 SINE Alu 0 149 48 7 1144 463 232 10 10 chr15 73323053 73323153 -30171821 + ID_B1 SINE B4 119 218 -6 7 1144 253 319 0 71 chr15 73323945 73324043 -30170931 - MER21B LTR ERV1 -254 609 519 7 1144 468 245 36 9 chr15 73324182 73324293 -30170681 - MER21B LTR ERV1 -535 328 215 7 1144 2482 166 2 24 chr15 73324465 73324891 -30170083 - MTC LTR MaLR 0 421 5 7 1144 424 272 8 95 chr15 73326030 73326156 -30168818 + RSINE1 SINE B4 50 164 -1 7 1144 684 116 41 36 chr15 73326157 73326767 -30168207 + (CA)n Simple_repeat Simple_repeat 1 613 0 7 1144 1146 97 0 0 chr15 73326789 73326933 -30168041 + B1_Mus1 SINE Alu 1 144 -4 7 1144 258 32 0 0 chr15 73326935 73326966 -30168008 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 7 1144 657 165 0 62 chr15 73327051 73327180 -30167794 + B3 SINE B2 93 213 -3 7 1144 315 71 0 0 chr15 73328655 73328697 -30166277 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 7 1144 1148 144 118 10 chr15 73329018 73329222 -30165752 + URR1A DNA MER1_type 1 226 0 7 1144 958 239 10 5 chr15 73330164 73330370 -30164604 + B3 SINE B2 5 211 -5 7 1144 395 158 51 26 chr15 73330406 73330484 -30164490 + MTC LTR MaLR 2 81 -340 7 1144 863 138 0 0 chr15 73330485 73330615 -30164359 + B3 SINE B2 1 130 -86 7 1144 1335 73 6 6 chr15 73330619 73330799 -30164175 + B2_Mm2 SINE B2 9 188 -7 7 1144 341 127 0 35 chr15 73330832 73330889 -30164085 - B2_Mm2 SINE B2 -94 101 47 7 1144 1260 95 11 63 chr15 73330986 73331177 -30163797 - MTB_Mm LTR MaLR -226 181 1 7 1144 1219 62 0 0 chr15 73331223 73331368 -30163606 - B1_Mus2 SINE Alu -1 146 2 7 1144 229 172 0 206 chr15 73331368 73331394 -30163580 + MTC LTR MaLR 362 386 -33 7 1144 1435 59 26 26 chr15 73331394 73331426 -30163548 - B2_Mm1t SINE B2 0 193 161 7 1144 279 0 0 0 chr15 73331426 73331457 -30163517 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 7 1144 1435 59 26 26 chr15 73331457 73331616 -30163358 - B2_Mm1t SINE B2 -33 160 2 7 1144 229 172 0 206 chr15 73331616 73331662 -30163312 + MTC LTR MaLR 387 419 0 7 1144 6170 148 33 106 chr15 73331661 73331822 -30163152 + MTC-int LTR MaLR 2 165 -1093 7 1144 1230 34 0 39 chr15 73331822 73331975 -30162999 + B1_Mus2 SINE Alu 1 147 0 7 1144 6170 148 33 106 chr15 73331975 73332139 -30162835 + MTC-int LTR MaLR 166 287 -971 7 1144 1142 62 0 7 chr15 73332139 73332284 -30162690 - B1_Mm SINE Alu -2 145 2 7 1144 6170 148 33 106 chr15 73332284 73332913 -30162061 + MTC-int LTR MaLR 288 919 -339 7 1144 677 215 211 17 chr15 73332913 73333093 -30161881 - B3 SINE B2 0 216 2 7 1144 5038 150 35 105 chr15 73333093 73333285 -30161689 + MTC-int LTR MaLR 920 1068 -190 7 1144 1223 113 5 0 chr15 73333285 73333470 -30161504 - B2_Mm2 SINE B2 -9 186 1 7 1144 5038 150 35 105 chr15 73333470 73333481 -30161493 + MTC-int LTR MaLR 1069 1073 -185 7 1144 1462 32 15 31 chr15 73333481 73333676 -30161298 - B2_Mm1a SINE B2 -1 192 1 7 1144 5038 150 35 105 chr15 73333676 73333747 -30161227 + MTC-int LTR MaLR 1074 1138 -120 7 1144 1098 78 0 0 chr15 73333747 73333889 -30161085 - B1_Mus1 SINE Alu -5 143 2 7 1144 5038 150 35 105 chr15 73333889 73334019 -30160955 + MTC-int LTR MaLR 1139 1258 0 7 1144 2168 154 62 22 chr15 73334019 73334424 -30160550 + MTC LTR MaLR 1 421 0 7 1144 669 245 138 0 chr15 73337213 73337409 -30157565 - ID_B1 SINE B4 0 224 2 7 1144 542 213 46 0 chr15 73337472 73337580 -30157394 - B1F SINE Alu -23 126 14 7 1144 1191 42 0 0 chr15 73337580 73337723 -30157251 + B1_Mus2 SINE Alu 1 143 -4 7 1144 21 0 0 0 chr15 73337782 73337803 -30157171 + AT_rich Low_complexity Low_complexity 1 21 0 7 1144 529 272 15 66 chr15 73337873 73338070 -30156904 + ID_B1 SINE B4 12 198 -26 7 1144 629 62 0 211 chr15 73337977 73338119 -30156855 + B1_Mm SINE Alu 27 138 -9 7 1144 198 0 0 0 chr15 73338151 73338173 -30156801 + (CTAA)n Simple_repeat Simple_repeat 3 24 0 7 1144 24 32 0 0 chr15 73338509 73338540 -30156434 + AT_rich Low_complexity Low_complexity 1 31 0 7 1144 599 234 20 46 chr15 73338579 73338731 -30156243 - B1_Mur4 SINE Alu -2 148 1 7 1144 1362 46 40 0 chr15 73338753 73338928 -30156046 + B2_Mm2 SINE B2 2 183 -12 7 1144 555 208 150 0 chr15 73338933 73339053 -30155921 + B3A SINE B2 2 139 -59 7 1144 22 35 0 0 chr15 73339065 73339094 -30155880 + AT_rich Low_complexity Low_complexity 1 29 0 7 1144 621 282 53 42 chr15 73339094 73339283 -30155691 - B3A SINE B2 -1 197 7 7 1144 636 196 79 14 chr15 73339357 73339497 -30155477 - B1_Mur2 SINE Alu 0 149 1 7 1144 838 144 79 0 chr15 73339514 73339653 -30155321 - B1_Mur4 SINE Alu 0 150 1 7 1144 1161 85 29 78 chr15 73339723 73339928 -30155046 + B2_Mm2 SINE B2 1 195 0 7 1144 1076 68 0 20 chr15 73339939 73340088 -30154886 + B1_Mm SINE Alu 2 147 0 7 1144 654 230 29 0 chr15 73340675 73340814 -30154160 - B1_Mur1 SINE Alu -6 143 1 7 1144 683 162 6 90 chr15 73340832 73340968 -30154006 - B1_Mus1 SINE Alu 0 148 22 7 1144 3325 25 2 2 chr15 73340968 73341364 -30153610 - MTA_Mm LTR MaLR 0 396 1 7 1144 683 162 6 90 chr15 73341364 73341383 -30153591 - B1_Mus1 SINE Alu -127 21 6 7 1144 24 0 0 0 chr15 73342372 73342396 -30152578 + AT_rich Low_complexity Low_complexity 1 24 0 7 1144 1106 122 16 11 chr15 73344121 73344312 -30150662 + B2_Mm1t SINE B2 2 193 0 7 1144 239 0 32 0 chr15 73344899 73344930 -30150044 + (TTG)n Simple_repeat Simple_repeat 2 33 0 7 1144 962 62 0 0 chr15 73344930 73345059 -30149915 - B1_Mm SINE Alu -6 141 13 7 1144 641 241 7 27 chr15 73345106 73345255 -30149719 + B1F SINE Alu 3 148 -1 7 1144 1213 41 0 0 chr15 73345355 73345502 -30149472 + B1_Mus2 SINE Alu 1 147 0 7 1144 219 69 0 0 chr15 73345502 73345531 -30149443 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1144 343 179 0 15 chr15 73345538 73345606 -30149368 + ID_B1 SINE B4 152 218 -6 7 1144 414 274 24 84 chr15 73346000 73346126 -30148848 + MER3 DNA MER1_type 10 135 -74 7 1144 207 0 0 0 chr15 73346126 73346149 -30148825 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 8 1144 414 274 24 84 chr15 73346149 73346162 -30148812 + MER3 DNA MER1_type 136 140 -69 7 1144 1347 82 16 0 chr15 73346162 73346346 -30148628 - B2_Mm2 SINE B2 -6 189 3 8 1144 414 274 24 84 chr15 73346346 73346372 -30148602 + MER3 DNA MER1_type 141 165 -44 7 1144 617 172 26 0 chr15 73346379 73346495 -30148479 + PB1D9 SINE Alu 2 120 0 8 1144 704 227 96 15 chr15 73346561 73346758 -30148216 - B3 SINE B2 0 216 4 8 1144 910 158 6 11 chr15 73346931 73347110 -30147864 + T-rich Low_complexity Low_complexity 2 179 0 8 1144 1104 75 0 13 chr15 73347123 73347272 -30147702 - B1_Mus2 SINE Alu 0 147 1 8 1144 962 84 7 27 chr15 73347314 73347460 -30147514 + B2_Mm2 SINE B2 2 144 -51 8 1144 297 0 0 0 chr15 73347462 73347495 -30147479 + (TG)n Simple_repeat Simple_repeat 2 34 0 8 1144 607 207 0 0 chr15 73347588 73347704 -30147270 - B1_Mur1 SINE Alu -21 128 13 8 1144 2146 125 75 27 chr15 73347705 73347745 -30147229 + MTC LTR MaLR 1 40 -381 8 1144 1002 105 245 16 chr15 73347745 73347929 -30147045 - URR1A DNA MER1_type 0 226 1 8 1144 2146 125 75 27 chr15 73347929 73348290 -30146684 + MTC LTR MaLR 41 421 0 8 1144 991 195 9 37 chr15 73348327 73348545 -30146429 - B3 SINE B2 0 216 5 8 1144 249 229 121 0 chr15 73350163 73350246 -30144728 - RMER13B LTR ERVK -4 904 812 8 1144 510 264 64 0 chr15 73350474 73350614 -30144360 - RSINE1 SINE B4 -4 161 13 8 1144 235 345 0 0 chr15 73350540 73350624 -30144350 - B3 SINE B2 -131 85 2 8 1144 1497 47 0 20 chr15 73350668 73350865 -30144109 - B2_Mm1a SINE B2 0 193 1 8 1144 354 235 108 0 chr15 73350890 73350992 -30143982 - ID_B1 SINE B4 -28 196 84 8 1144 3086 68 0 7 chr15 73351004 73351407 -30143567 - MTB LTR MaLR 0 400 1 8 1144 247 188 159 0 chr15 73351553 73351622 -30143352 - ID4 SINE ID 0 83 4 8 1144 886 258 98 4 chr15 73352359 73352624 -30142350 - B4A SINE B4 0 292 3 8 1144 200 256 0 0 chr15 73353061 73353104 -30141870 + CT-rich Low_complexity Low_complexity 2 44 0 8 1144 1150 75 0 0 chr15 73353107 73353253 -30141721 - B1_Mus1 SINE Alu -2 146 1 8 1144 308 267 66 11 chr15 73353262 73353353 -30141621 - PB1D7 SINE Alu -2 118 23 8 1144 22 35 0 0 chr15 73354847 73354876 -30140098 + AT_rich Low_complexity Low_complexity 1 29 0 8 1144 863 121 0 35 chr15 73354893 73355026 -30139948 + B1_Mur3 SINE Alu 9 137 -12 8 1144 201 74 0 0 chr15 73355026 73355053 -30139921 + (CCA)n Simple_repeat Simple_repeat 1 27 0 8 1144 863 121 0 35 chr15 73355053 73355064 -30139910 + B1_Mur3 SINE Alu 138 148 -1 8 1144 327 296 44 88 chr15 73355064 73355092 -30139882 + B4 SINE B4 68 219 -73 8 1144 745 183 0 0 chr15 73355092 73355223 -30139751 + B1F SINE Alu 12 142 -7 8 1144 863 59 0 0 chr15 73355243 73355361 -30139613 + B1_Mus2 SINE Alu 30 147 0 8 1144 622 85 0 0 chr15 73355600 73355694 -30139280 + B1_Mur4 SINE Alu 2 95 -55 8 1144 303 243 0 59 chr15 73355601 73355719 -30139255 + ID_B1 SINE B4 84 194 -30 8 1144 239 321 110 2 chr15 73355841 73355951 -30139023 + B1F2 SINE Alu 1 121 -28 8 1144 1114 55 7 0 chr15 73356099 73356245 -30138729 + B1_Mus1 SINE Alu 2 148 0 8 1144 475 195 47 39 chr15 73356906 73357034 -30137940 + ID_B1 SINE B4 86 214 -10 8 1144 21 0 0 0 chr15 73357122 73357143 -30137831 + AT_rich Low_complexity Low_complexity 1 21 0 8 1144 1153 68 0 0 chr15 73357190 73357337 -30137637 + B1_Mus2 SINE Alu 1 147 0 8 1144 1158 83 83 0 chr15 73357374 73357554 -30137420 - B2_Mm2 SINE B2 0 195 1 8 1144 750 175 28 7 chr15 73359083 73359227 -30135747 - B1_Mus2 SINE Alu 0 147 1 8 1144 290 26 26 0 chr15 73359465 73359504 -30135470 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 8 1144 472 161 184 18 chr15 73359504 73359618 -30135356 - B1_Mm SINE Alu -13 134 2 8 1144 772 125 4 17 chr15 73359728 73359864 -30135110 + B1_Mus2 SINE Alu 15 147 0 8 1144 369 109 0 0 chr15 73359864 73359919 -30135055 + (A)n Simple_repeat Simple_repeat 1 55 0 8 1144 889 225 14 36 chr15 73360287 73360508 -30134466 - B3 SINE B2 0 216 1 8 1144 564 216 44 22 chr15 73360762 73360899 -30134075 - B1F SINE Alu -9 140 1 8 1144 453 214 0 0 chr15 73361102 73361205 -30133769 + T-rich Low_complexity Low_complexity 1 103 0 8 1144 1059 50 0 0 chr15 73361205 73361344 -30133630 - B1_Mus1 SINE Alu 0 148 10 8 1144 450 265 0 0 chr15 73361981 73362083 -30132891 + ID_B1 SINE B4 121 222 -2 8 1144 432 229 178 61 chr15 73362292 73362456 -30132518 - B4 SINE B4 0 292 92 8 1144 1059 194 14 5 chr15 73362635 73362842 -30132132 - B3 SINE B2 -4 212 4 8 1144 279 133 0 0 chr15 73362851 73362896 -30132078 + (TCC)n Simple_repeat Simple_repeat 1 45 0 8 1144 364 301 72 43 chr15 73362896 73362920 -30132054 - B4A SINE B4 -148 144 126 8 1144 361 252 58 10 chr15 73362920 73363024 -30131950 - PB1D9 SINE Alu -10 110 2 8 1144 364 301 72 43 chr15 73363024 73363138 -30131836 - B4A SINE B4 -167 125 2 8 1144 22 56 0 0 chr15 73364514 73364550 -30130424 + AT_rich Low_complexity Low_complexity 1 36 0 8 1144 397 62 0 110 chr15 73364576 73364649 -30130325 - B2_Mm2 SINE B2 -129 66 2 8 1144 217 200 49 74 chr15 73364931 73365012 -30129962 - PB1D7 SINE Alu -11 109 31 8 1144 334 339 35 52 chr15 73365453 73365668 -30129306 - B4A SINE B4 -14 278 83 8 1144 1119 88 0 0 chr15 73365668 73365816 -30129158 - B1_Mus1 SINE Alu 0 148 1 8 1144 32 26 0 0 chr15 73365820 73365859 -30129115 + AT_rich Low_complexity Low_complexity 1 39 0 8 1144 198 0 0 0 chr15 73365859 73365881 -30129093 + (TG)n Simple_repeat Simple_repeat 1 22 0 8 1144 462 36 0 0 chr15 73365881 73365936 -30129038 + (GA)n Simple_repeat Simple_repeat 1 56 0 8 1144 308 271 8 15 chr15 73365947 73366039 -30128935 - B1F SINE Alu -11 139 46 8 1144 225 0 0 0 chr15 73366397 73366422 -30128552 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 1144 271 331 0 33 chr15 73367265 73367402 -30127572 + L1MB2 LINE L1 5896 6028 -155 8 1144 471 113 0 0 chr15 73367962 73368033 -30126941 + (TCC)n Simple_repeat Simple_repeat 3 73 0 8 1144 815 170 14 7 chr15 73368035 73368177 -30126797 - B1_Mur2 SINE Alu -6 143 1 8 1144 546 16 0 0 chr15 73368197 73368260 -30126714 + (TG)n Simple_repeat Simple_repeat 2 64 0 8 1144 415 263 20 0 chr15 73368297 73368396 -30126578 - PB1D10 SINE Alu 0 117 17 8 1144 938 135 13 7 chr15 73368687 73368836 -30126138 + B1_Mur4 SINE Alu 1 150 0 8 1144 204 270 40 0 chr15 73368932 73369006 -30125968 + (TATATG)n Simple_repeat Simple_repeat 5 81 0 8 1144 216 146 0 59 chr15 73369053 73369104 -30125870 - ID4 SINE ID -1 82 35 8 1144 666 208 90 28 chr15 73369126 73369304 -30125670 + B3 SINE B2 3 191 -25 8 1144 437 0 19 0 chr15 73369859 73369912 -30125062 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 1144 244 288 169 0 chr15 73370420 73370538 -30124436 + L2a LINE L2 3279 3416 -10 8 1144 239 0 0 31 chr15 73372092 73372124 -30122850 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 8 1144 1004 176 5 25 chr15 73372155 73372192 -30122782 - B2_Mm2 SINE B2 -1 194 162 8 1144 333 0 0 0 chr15 73372192 73372229 -30122745 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 8 1144 1004 176 5 25 chr15 73372229 73372389 -30122585 - B2_Mm2 SINE B2 -34 161 1 8 1144 413 268 71 78 chr15 73372458 73372612 -30122362 + ID_B1 SINE B4 69 221 -3 8 1144 22 0 0 0 chr15 73374619 73374641 -30120333 + AT_rich Low_complexity Low_complexity 1 22 0 8 1144 327 248 81 107 chr15 73375677 73375826 -30119148 + B1F SINE Alu 2 146 -3 8 1144 196 345 77 34 chr15 73376157 73376274 -30118700 + MIRc SINE MIR 3 124 -144 8 1144 3258 171 19 5 chr15 73376818 73377404 -30117570 - RLTR17 LTR ERVK 0 692 99 8 1144 180 211 115 0 chr15 73377492 73377523 -30117451 - MIRb SINE MIR -38 230 194 8 1144 198 0 0 0 chr15 73377523 73377545 -30117429 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 8 1144 180 211 115 0 chr15 73377545 73377565 -30117409 - MIRb SINE MIR -75 193 174 8 1144 242 95 0 106 chr15 73378195 73378242 -30116732 + MER2 DNA MER2_type 96 137 -208 8 1144 501 262 55 22 chr15 73378244 73378427 -30116547 - RCHARR1 DNA MER1_type 0 974 786 8 1144 742 271 32 5 chr15 73378434 73378623 -30116351 + ID_B1 SINE B4 24 217 -7 8 1144 828 136 75 59 chr15 73378635 73378822 -30116152 + B2_Mm2 SINE B2 1 190 -5 8 1144 278 203 14 14 chr15 73378823 73378893 -30116081 - RCHARR1 DNA MER1_type -178 796 727 8 1144 880 149 188 27 chr15 73378902 73379088 -30115886 - B3 SINE B2 0 216 1 8 1144 603 269 0 0 chr15 73379108 73379249 -30115725 - B1_Mur2 SINE Alu -7 142 2 8 1144 567 248 28 7 chr15 73379265 73379407 -30115567 + B1F SINE Alu 5 149 0 8 1144 2076 226 36 49 chr15 73379416 73379965 -30115009 - RCHARR1 DNA MER1_type -241 733 192 8 1144 1468 83 289 4 chr15 73381621 73381874 -30113100 - ORR1A3 LTR MaLR 0 326 2 8 1144 417 217 0 0 chr15 73383983 73384066 -30110908 + ID4_ SINE ID 1 83 0 8 1144 180 0 0 0 chr15 73385853 73385873 -30109101 + (CA)n Simple_repeat Simple_repeat 2 21 0 8 1144 399 292 47 0 chr15 73385873 73385979 -30108995 - PB1D10 SINE Alu -5 112 2 8 1144 1210 108 16 5 chr15 73385987 73386174 -30108800 - B2_Mm2 SINE B2 -6 189 1 8 1144 225 0 0 0 chr15 73386184 73386209 -30108765 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 8 1144 250 238 271 12 chr15 73386209 73386294 -30108680 - PB1D9 SINE Alu -12 108 2 8 1144 315 276 139 30 chr15 73386326 73386427 -30108547 + B1F2 SINE Alu 6 117 0 8 1144 425 246 0 34 chr15 73387209 73387327 -30107647 + PB1D10 SINE Alu 1 114 -3 8 1144 226 303 54 33 chr15 73388252 73388344 -30106630 - PB1D10 SINE Alu 0 117 24 8 1144 660 218 56 37 chr15 73388376 73388538 -30106436 - RSINE1 SINE B4 0 165 1 8 1144 420 234 108 0 chr15 73388574 73388685 -30106289 - B1F SINE Alu 0 149 27 9 1144 180 0 0 0 chr15 73388801 73388821 -30106153 + (T)n Simple_repeat Simple_repeat 1 20 0 9 1144 600 136 70 13 chr15 73389042 73389198 -30105776 + C-rich Low_complexity Low_complexity 4 168 0 9 1144 595 234 8 0 chr15 73389186 73389448 -30105526 + CT-rich Low_complexity Low_complexity 1 264 0 9 1144 526 283 13 33 chr15 73389449 73389599 -30105375 - ID_B1 SINE B4 0 224 78 9 1144 259 339 117 57 chr15 73390255 73390502 -30104472 - B4 SINE B4 0 292 31 9 1144 4206 173 11 6 chr15 73390533 73391260 -30103714 - Lx5 LINE L1 0 7050 6320 9 1144 289 290 50 25 chr15 73391262 73391421 -30103553 - L1_Mm LINE L1 -89 5794 5632 9 1144 701 281 0 0 chr15 73392454 73392600 -30102374 + RSINE1 SINE B4 5 150 -15 9 1144 1252 21 0 0 chr15 73392950 73393091 -30101883 + B1_Mus2 SINE Alu 2 142 -5 9 1144 503 243 112 53 chr15 73393613 73393765 -30101209 + RSINE1 SINE B4 3 163 -2 9 1144 510 149 0 0 chr15 73393765 73393852 -30101122 + (ATG)n Simple_repeat Simple_repeat 2 88 0 9 1144 1381 55 66 0 chr15 73393855 73394037 -30100937 + B2_Mm2 SINE B2 1 194 -1 9 1144 436 291 27 18 chr15 73394403 73394515 -30100459 + PB1D7 SINE Alu 1 113 -7 9 1144 253 73 24 0 chr15 73394607 73394648 -30100326 - B3 SINE B2 -173 43 2 9 1144 412 352 91 9 chr15 73396607 73396839 -30098135 - MLT1B LTR MaLR -139 251 1 9 1144 247 292 56 19 chr15 73398158 73398174 -30096800 - B1F SINE Alu -1 148 37 9 1144 358 264 0 11 chr15 73398174 73398266 -30096708 - ID_B1 SINE B4 -16 208 118 9 17 4866 160 85 7 chr15 73399836 73400788 -30094186 - RLTR25A LTR ERVK 0 1103 78 9 1145 243 0 0 0 chr15 73400792 73400819 -30094155 + (A)n Simple_repeat Simple_repeat 1 27 0 9 1145 340 212 12 59 chr15 73402720 73402805 -30092169 - ID4 SINE ID 0 83 3 9 1145 307 311 39 0 chr15 73402836 73402939 -30092035 - PB1D10 SINE Alu -8 109 3 9 1145 950 123 0 0 chr15 73403551 73403681 -30091293 + B1_Mur4 SINE Alu 2 131 -19 9 1145 231 301 11 108 chr15 73403683 73403776 -30091198 + PB1D10 SINE Alu 3 86 -31 9 1145 746 243 52 5 chr15 73403824 73404051 -30090923 - MTEa LTR MaLR 0 379 123 9 1145 280 239 56 0 chr15 73404054 73404125 -30090849 + L1M4c LINE L1 2382 2456 -3928 9 1145 487 260 24 24 chr15 73404125 73404251 -30090723 + RSINE1 SINE B4 3 128 -37 9 1145 238 290 72 0 chr15 73404384 73404453 -30090521 + ID_B1 SINE B4 117 190 -34 9 1145 545 78 56 0 chr15 73404717 73404807 -30090167 + B1_Mur4 SINE Alu 27 121 -29 9 1145 263 226 152 8 chr15 73405019 73405144 -30089830 + L1M4c LINE L1 4271 4413 -1969 9 1145 460 245 2 25 chr15 73405158 73405287 -30089687 + B1F SINE Alu 6 127 -20 9 1145 567 223 299 0 chr15 73405289 73405446 -30089528 + B3 SINE B2 2 205 -11 9 1145 288 281 111 41 chr15 73405629 73405800 -30089174 + L1M5 LINE L1 4416 4598 -1548 9 1145 701 188 0 0 chr15 73406161 73406273 -30088701 + PB1D7 SINE Alu 1 112 -8 9 1145 236 263 219 0 chr15 73406372 73406486 -30088488 + L1M5 LINE L1 5259 5397 -776 9 1145 597 251 49 66 chr15 73406490 73406673 -30088301 + B3A SINE B2 15 194 -4 9 1145 613 262 125 47 chr15 73413427 73413683 -30081291 - B4 SINE B4 -10 282 7 9 1145 441 241 16 57 chr15 73413735 73413858 -30081116 + PB1D9 SINE Alu 3 120 0 9 1145 359 297 72 0 chr15 73413884 73413995 -30080979 + B1F SINE Alu 8 126 -23 9 1145 309 211 0 0 chr15 73414332 73414389 -30080585 - ID_B1 SINE B4 -3 221 165 9 1145 288 235 93 47 chr15 73414334 73414441 -30080533 - PB1D10 SINE Alu -5 112 1 9 1145 942 200 72 0 chr15 73418309 73418504 -30076470 - B3 SINE B2 -6 210 2 9 1145 1238 62 0 0 chr15 73421623 73421769 -30073205 + B1_Mus1 SINE Alu 2 147 -1 9 1145 390 157 294 0 chr15 73422843 73422945 -30072029 + B3 SINE B2 2 133 -83 9 1145 667 236 170 25 chr15 73423075 73423356 -30071618 - MTD LTR MaLR -44 375 14 9 1145 266 68 0 83 chr15 73427305 73427353 -30067621 + B2_Mm2 SINE B2 2 45 -150 9 1145 299 246 0 0 chr15 73428585 73428650 -30066324 - L1MB1 LINE L1 -255 5913 5849 9 1145 231 290 0 16 chr15 73429086 73429149 -30065825 + ID4 SINE ID 15 76 -7 9 1145 469 262 57 0 chr15 73430635 73430776 -30064198 + B1F2 SINE Alu 1 149 0 9 1145 371 227 13 0 chr15 73430825 73430900 -30064074 + RSINE1 SINE B4 79 154 -11 9 1145 380 276 70 8 chr15 73431447 73431575 -30063399 + B1F SINE Alu 9 144 -5 9 1145 225 0 0 0 chr15 73431586 73431611 -30063363 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 9 1145 811 172 7 65 chr15 73431616 73431771 -30063203 + B1_Mur3 SINE Alu 4 149 0 9 1145 468 0 0 0 chr15 73431836 73431888 -30063086 + (GA)n Simple_repeat Simple_repeat 1 52 0 9 1145 614 195 24 41 chr15 73433204 73433327 -30061647 + RSINE1 SINE B4 3 123 -42 9 1145 312 91 0 0 chr15 73433340 73433384 -30061590 + (CAAT)n Simple_repeat Simple_repeat 1 44 0 9 1145 708 127 68 0 chr15 73433436 73433554 -30061420 + B1_Mur4 SINE Alu 18 143 -7 9 1145 1718 21 0 0 chr15 73433579 73433772 -30061202 + B2_Mm1a SINE B2 1 193 0 9 1145 577 304 93 100 chr15 73433887 73434198 -30060776 - MLT1F2 LTR MaLR -2 567 259 9 1145 202 143 24 0 chr15 73436125 73436167 -30058807 + (TA)n Simple_repeat Simple_repeat 1 43 0 9 1145 865 98 275 18 chr15 73436891 73437058 -30057916 + B3 SINE B2 2 211 -5 9 1145 453 214 10 0 chr15 73437468 73437566 -30057408 + PB1D10 SINE Alu 10 108 -9 9 1145 338 262 9 55 chr15 73437566 73437577 -30057397 + ID_B1 SINE B4 91 194 -30 9 1145 510 253 75 90 chr15 73438115 73438315 -30056659 + B3A SINE B2 2 198 0 9 1145 368 248 246 8 chr15 73438767 73438885 -30056089 + ID_B1 SINE B4 79 224 0 9 1145 697 150 30 52 chr15 73439294 73439428 -30055546 - B1_Mus1 SINE Alu 0 148 18 9 1145 369 0 0 0 chr15 73442796 73442837 -30052137 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 1145 397 213 0 21 chr15 73443654 73443750 -30051224 + L1MC LINE L1 5184 5277 -869 9 1145 451 283 6 76 chr15 73443772 73443929 -30051045 + ID_B1 SINE B4 79 224 0 9 1145 484 221 269 22 chr15 73444043 73444311 -30050663 + L1MC LINE L1 5448 5781 -552 9 1145 496 315 16 0 chr15 73444315 73444442 -30050532 + B1F1 SINE Alu 1 129 -20 9 1145 394 250 57 16 chr15 73444552 73444674 -30050300 + B1F SINE Alu 21 147 -2 9 1145 227 301 36 12 chr15 73444678 73444711 -30050263 + PB1D10 SINE Alu 32 117 0 9 1145 227 235 0 0 chr15 73444711 73444762 -30050212 + ID_B1 SINE B4 174 224 0 9 1145 448 229 10 50 chr15 73444869 73444970 -30050004 + B1F SINE Alu 2 98 -51 9 1145 357 43 0 0 chr15 73446063 73446110 -30048864 + (CA)n Simple_repeat Simple_repeat 2 48 0 9 1145 564 187 71 31 chr15 73446857 73446984 -30047990 - B1F2 SINE Alu -15 134 3 9 1145 369 189 14 21 chr15 73447057 73447142 -30047832 + PB1 SINE Alu 15 99 -28 9 1145 346 270 35 35 chr15 73447167 73447282 -30047692 + PB1D7 SINE Alu 1 115 -5 9 1145 546 193 70 9 chr15 73447445 73447560 -30047414 - ID_B1 SINE B4 -2 222 101 9 1145 379 307 148 24 chr15 73448601 73448811 -30046163 - MER44D DNA MER2_type -463 242 7 9 1145 216 186 96 85 chr15 73449727 73449821 -30045153 + BC1_Mm scRNA scRNA 8 102 -50 9 1145 855 158 220 0 chr15 73451931 73452108 -30042866 + B3 SINE B2 1 216 0 9 1145 351 179 0 0 chr15 73452479 73452546 -30042428 + A-rich Low_complexity Low_complexity 1 67 0 9 1145 248 114 0 0 chr15 73452546 73452581 -30042393 + (GGA)n Simple_repeat Simple_repeat 2 36 0 9 1145 546 16 0 0 chr15 73452581 73452644 -30042330 + (TGG)n Simple_repeat Simple_repeat 2 64 0 9 1145 911 92 14 21 chr15 73452933 73453078 -30041896 - B1_Mus2 SINE Alu 0 147 4 9 1145 244 297 161 0 chr15 73455601 73455719 -30039255 + B1F1 SINE Alu 5 141 -8 9 1145 573 162 99 0 chr15 73455728 73455839 -30039135 + B3A SINE B2 2 123 -75 9 1145 492 140 35 61 chr15 73455884 73455998 -30038976 + PB1D9 SINE Alu 9 119 -1 9 1145 639 166 266 0 chr15 73456018 73456187 -30038787 + B3 SINE B2 1 214 -2 9 1145 473 242 16 55 chr15 73457103 73457230 -30037744 + B1F SINE Alu 23 144 -5 9 1145 401 259 147 0 chr15 73457234 73457377 -30037597 + RSINE1 SINE B4 2 165 0 9 1145 341 344 25 0 chr15 73457962 73458084 -30036890 - MIR SINE MIR -22 240 116 9 1145 201 162 0 0 chr15 73458788 73458825 -30036149 + A-rich Low_complexity Low_complexity 1 37 0 9 1145 448 263 26 9 chr15 73459623 73459738 -30035236 + PB1D10 SINE Alu 1 117 0 9 1145 877 148 68 47 chr15 73460926 73461117 -30033857 + B2_Mm2 SINE B2 1 195 0 9 1145 1186 41 0 0 chr15 73461823 73461968 -30033006 + B1_Mus1 SINE Alu 3 147 -1 9 1145 222 118 0 0 chr15 73462031 73462065 -30032909 + (GAAA)n Simple_repeat Simple_repeat 1 34 0 9 1145 313 268 12 12 chr15 73462075 73462158 -30032816 + ID4 SINE ID 1 83 0 9 1145 596 245 0 64 chr15 73462295 73462452 -30032522 + B1_Mur2 SINE Alu 3 149 0 9 1145 1249 14 0 0 chr15 73463712 73463859 -30031115 + B1_Mm SINE Alu 1 147 0 9 1145 231 229 32 16 chr15 73463944 73464006 -30030968 + ID4_ SINE ID 5 67 -16 9 1145 361 263 128 68 chr15 73465433 73465682 -30029292 + MLT1A0 LTR MaLR 72 335 -30 1 1145 496 262 98 52 chr15 73466408 73466581 -30028393 + ID_B1 SINE B4 42 222 -2 1 1145 453 62 0 0 chr15 73466582 73466647 -30028327 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 1145 317 227 25 76 chr15 73466723 73466842 -30028132 + PB1D10 SINE Alu 5 117 0 1 1145 268 163 41 0 chr15 73468611 73468660 -30026314 - PB1D7 SINE Alu -1 119 69 1 1145 224 306 11 105 chr15 73469524 73469619 -30025355 + B4A SINE B4 66 151 -141 1 1145 359 340 28 0 chr15 73469560 73469666 -30025308 + PB1D7 SINE Alu 7 115 -5 1 1145 362 196 41 8 chr15 73469922 73470031 -30024943 - PB1D10 SINE Alu -10 117 1 1 1145 325 212 207 23 chr15 73470054 73470141 -30024833 - B1F SINE Alu -8 141 39 1 1145 199 29 86 0 chr15 73470189 73470224 -30024750 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 1 1145 788 150 7 21 chr15 73470225 73470368 -30024606 + B1_Mur3 SINE Alu 9 149 0 1 1145 816 98 67 8 chr15 73470545 73470662 -30024312 + B1_Mus1 SINE Alu 7 123 -25 1 1145 407 35 0 17 chr15 73470662 73470720 -30024254 + (CAAAC)n Simple_repeat Simple_repeat 2 58 0 1 1145 816 98 67 8 chr15 73470720 73470736 -30024238 + B1_Mus1 SINE Alu 124 148 0 1 1145 405 291 78 77 chr15 73470730 73470916 -30024058 + B4A SINE B4 67 265 -27 1 1145 483 100 0 0 chr15 73470916 73470986 -30023988 + (CA)n Simple_repeat Simple_repeat 1 70 0 1 1145 1136 62 0 0 chr15 73471637 73471783 -30023191 + B1_Mus1 SINE Alu 1 146 -2 1 1145 231 61 0 0 chr15 73471783 73471816 -30023158 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 1 1145 605 250 14 0 chr15 73471991 73472131 -30022843 + ID_B1 SINE B4 81 222 -2 1 1145 655 230 55 78 chr15 73472149 73472366 -30022608 + B3 SINE B2 5 216 0 1 1145 622 257 46 41 chr15 73472708 73472903 -30022071 + B3A SINE B2 3 198 0 1 1145 210 284 0 56 chr15 73472924 73472995 -30021979 - PB1D10 SINE Alu -18 99 33 1 1145 303 306 0 101 chr15 73473014 73473123 -30021851 + ID_B1 SINE B4 70 167 -57 1 1145 337 277 41 89 chr15 73473026 73473149 -30021825 + PB1D10 SINE Alu 1 117 0 1 1145 21 0 0 0 chr15 73473686 73473707 -30021267 + AT_rich Low_complexity Low_complexity 1 21 0 1 1145 225 229 27 18 chr15 73475933 73476044 -30018930 + (CGG)n Simple_repeat Simple_repeat 1 112 0 1 1145 234 381 23 45 chr15 73476697 73476829 -30018145 + MIRb SINE MIR 40 168 -100 1 1145 361 263 11 19 chr15 73476868 73476982 -30017992 + L1ME3A LINE L1 5453 5566 -778 1 1145 627 188 0 8 chr15 73477017 73477135 -30017839 - B1_Mur1 SINE Alu -1 148 32 1 1145 331 331 87 11 chr15 73477223 73477406 -30017568 + L1ME3A LINE L1 5696 5892 -281 1 1145 243 246 88 0 chr15 73477443 73477500 -30017474 + B1F SINE Alu 58 119 -30 1 1145 219 330 76 11 chr15 73477553 73477645 -30017329 + PB1D10 SINE Alu 20 117 0 1 1145 783 201 0 0 chr15 73477889 73478033 -30016941 - B1_Mur4 SINE Alu -2 148 5 1 1145 628 200 174 0 chr15 73478077 73478232 -30016742 - B3A SINE B2 -16 182 1 1 1145 345 291 0 0 chr15 73478233 73478312 -30016662 - RSINE1 SINE B4 -85 80 2 1 1145 429 207 92 60 chr15 73478416 73478601 -30016373 + B3A SINE B2 5 195 -3 1 1145 1550 42 0 0 chr15 73478630 73478822 -30016152 - B2_Mm1a SINE B2 0 193 2 1 1145 433 302 0 25 chr15 73478896 73479018 -30015956 - ID_B1 SINE B4 0 224 106 1 1145 207 0 0 0 chr15 73479060 73479083 -30015891 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 1145 261 232 14 55 chr15 73479083 73479146 -30015828 - ID_B1 SINE B4 -11 213 151 1 1145 180 0 0 0 chr15 73479169 73479189 -30015785 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1145 262 270 0 75 chr15 73479436 73479516 -30015458 + PB1D7 SINE Alu 45 118 -2 1 1145 355 165 43 86 chr15 73479644 73479737 -30015237 + B4A SINE B4 1 89 -203 1 1145 535 360 11 33 chr15 73479746 73480022 -30014952 + B4A SINE B4 1 270 -22 1 1145 252 103 17 33 chr15 73480058 73480118 -30014856 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 1145 318 186 60 42 chr15 73480130 73480298 -30014676 + (CA)n Simple_repeat Simple_repeat 2 172 0 1 1145 1760 133 35 32 chr15 73480359 73480700 -30014274 + ORR1A4 LTR MaLR 28 347 -12 1 1145 510 290 0 0 chr15 73481000 73481124 -30013850 + ID_B1 SINE B4 99 222 -2 1 1145 544 234 35 94 chr15 73481306 73481476 -30013498 - B3 SINE B2 0 216 57 1 1145 1004 81 7 26 chr15 73481529 73481682 -30013292 - B1_Mur4 SINE Alu 0 150 1 1 1145 443 209 25 50 chr15 73482762 73482883 -30012091 + PB1D7 SINE Alu 1 118 -2 1 1145 203 125 25 0 chr15 73482886 73482926 -30012048 + (CAA)n Simple_repeat Simple_repeat 2 42 0 1 1145 419 233 65 43 chr15 73483129 73483268 -30011706 - B1F2 SINE Alu -5 144 3 1 1145 288 0 0 0 chr15 73483711 73483743 -30011231 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1145 363 207 32 0 chr15 73484320 73484413 -30010561 + PB1D9 SINE Alu 24 119 -1 1 1145 471 73 0 0 chr15 73484413 73484481 -30010493 + (CCAA)n Simple_repeat Simple_repeat 1 68 0 1 1145 232 265 66 75 chr15 73484486 73484515 -30010459 + ID SINE ID 50 77 -147 1 1145 261 178 49 99 chr15 73484515 73484596 -30010378 + PB1D10 SINE Alu 1 77 -40 1 1145 261 284 119 0 chr15 73484645 73484754 -30010220 - MIR SINE MIR -104 158 37 1 1145 428 252 146 0 chr15 73485290 73485393 -30009581 + RSINE1 SINE B4 3 120 -45 1 1145 459 0 0 0 chr15 73485407 73485458 -30009516 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1145 713 93 9 0 chr15 73485464 73485571 -30009403 + (TAGA)n Simple_repeat Simple_repeat 2 109 0 1 1145 1093 65 0 0 chr15 73485588 73485726 -30009248 - B1_Mus1 SINE Alu -10 138 1 1 1145 1306 62 50 0 chr15 73485735 73485914 -30009060 - B2_Mm2 SINE B2 -6 189 2 1 1145 336 264 8 83 chr15 73485948 73486068 -30008906 + PB1D10 SINE Alu 1 111 -6 1 1145 699 258 47 47 chr15 73486090 73486302 -30008672 + ID_B1 SINE B4 13 224 0 1 1145 750 203 35 47 chr15 73486337 73486595 -30008379 + RMER17B LTR ERVK 172 426 -532 1 1145 1034 107 6 17 chr15 73486595 73486775 -30008199 + (TTC)n Simple_repeat Simple_repeat 2 179 0 1 1145 1153 41 7 0 chr15 73486793 73486938 -30008036 - B1_Mus1 SINE Alu -1 147 2 1 1145 665 52 0 86 chr15 73486938 73487026 -30007948 + B1_Mus2 SINE Alu 52 139 -8 1 1145 207 0 0 0 chr15 73487026 73487049 -30007925 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 1145 665 52 0 86 chr15 73487049 73487065 -30007909 + B1_Mus2 SINE Alu 140 147 0 1 1145 235 250 143 48 chr15 73487103 73487187 -30007787 + B4 SINE B4 201 292 0 1 1145 205 211 19 0 chr15 73487187 73487239 -30007735 + GA-rich Low_complexity Low_complexity 3 55 0 1 1145 278 134 15 0 chr15 73487367 73487434 -30007540 + (CAAAAA)n Simple_repeat Simple_repeat 5 72 0 1 1145 484 233 78 0 chr15 73487452 73487568 -30007406 + RSINE1 SINE B4 34 158 -7 1 1145 487 248 20 72 chr15 73487592 73487744 -30007230 + B1F1 SINE Alu 6 149 0 1 1145 595 229 63 21 chr15 73488507 73488650 -30006324 + ID_B1 SINE B4 76 224 0 1 1145 930 208 28 33 chr15 73488674 73488888 -30006086 + B3 SINE B2 4 216 0 1 1145 202 123 0 34 chr15 73488888 73488947 -30006027 + (CAAA)n Simple_repeat Simple_repeat 4 60 0 1 1145 257 146 0 40 chr15 73489219 73489269 -30005705 - B1_Mur4 SINE Alu -6 144 97 1 1145 668 239 0 7 chr15 73490230 73490369 -30004605 - ID_B1 SINE B4 0 224 87 1 1145 870 156 200 0 chr15 73491663 73491843 -30003131 - B3 SINE B2 0 216 1 1 1145 306 270 44 11 chr15 73492087 73492177 -30002797 + MIRb SINE MIR 95 187 -81 1 1145 183 237 0 0 chr15 73492673 73492711 -30002263 + MIR SINE MIR 108 145 -117 1 1145 855 115 0 0 chr15 73493473 73493603 -30001371 + (TTTC)n Simple_repeat Simple_repeat 3 132 0 1 1145 1050 45 0 22 chr15 73493609 73493746 -30001228 - B1_Mus1 SINE Alu -12 136 3 1 1145 251 259 86 0 chr15 73493845 73493926 -30001048 + MLT1C LTR MaLR 1 88 -379 1 1145 603 164 243 55 chr15 73493974 73494129 -30000845 + B3 SINE B2 1 197 -19 1 1145 2438 119 144 28 chr15 73494129 73494594 -30000380 - RLTR28 LTR ERVL -2 522 4 1 1145 603 164 243 55 chr15 73494594 73494619 -30000355 + B3 SINE B2 198 215 -1 1 1145 1102 70 0 0 chr15 73494621 73494764 -30000210 + B1_Mus1 SINE Alu 1 143 -5 1 1145 186 43 0 0 chr15 73494775 73494798 -30000176 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1145 646 223 23 0 chr15 73494831 73494961 -30000013 + B1F SINE Alu 5 137 -12 1 1145 332 229 17 52 chr15 73495226 73495341 -29999633 + PB1D7 SINE Alu 5 115 -5 1 1145 472 233 39 0 chr15 73495786 73495889 -29999085 + B1_Mur3 SINE Alu 17 123 -26 1 1145 331 237 263 0 chr15 73495883 73496001 -29998973 - B3A SINE B2 -41 157 9 1 1145 491 232 40 0 chr15 73496090 73496215 -29998759 - MER58B DNA MER1_type -141 200 71 1 1145 210 128 0 0 chr15 73496219 73496258 -29998716 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1145 855 166 40 0 chr15 73496438 73496589 -29998385 + URR1A DNA MER1_type 1 157 -69 1 1145 1566 209 146 73 chr15 73496706 73497228 -29997746 + RMER4B LTR ERVK 17 576 -9 1 1145 412 200 85 25 chr15 73497181 73497299 -29997675 + URR1A DNA MER1_type 101 225 -1 1 1145 341 286 0 10 chr15 73497736 73497835 -29997139 - ID_B1 SINE B4 -42 182 85 1 1145 388 181 14 0 chr15 73497897 73497967 -29997007 + B1F SINE Alu 24 94 -55 1 1145 656 223 106 40 chr15 73497967 73498229 -29996745 - MTD LTR MaLR 0 419 121 1 1145 753 172 0 0 chr15 73498366 73498546 -29996428 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1145 211 239 58 29 chr15 73498575 73498644 -29996330 - B4 SINE B4 -221 71 1 1 1145 417 109 0 0 chr15 73498972 73499036 -29995938 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 1145 271 331 108 0 chr15 73499457 73499587 -29995387 - L2b LINE L2 -14 3361 3218 1 1145 1595 161 82 6 chr15 73500126 73500445 -29994529 - ORR1D1 LTR MaLR 0 374 32 1 1145 219 167 204 0 chr15 73500446 73500500 -29994474 + B2_Mm2 SINE B2 1 65 -130 2 1145 1103 114 80 0 chr15 73500511 73500686 -29994288 + B2_Mm2 SINE B2 5 193 -2 3 1145 375 23 0 0 chr15 73500946 73500990 -29993984 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1145 277 297 11 21 chr15 73500993 73501086 -29993888 - B1_Mus1 SINE Alu -56 92 1 5 1145 268 261 234 0 chr15 73503358 73503469 -29991505 - ID_B1 SINE B4 -8 216 80 6 1145 518 290 106 31 chr15 73505275 73505567 -29989407 - RMER10A LTR ERVL -9 433 120 7 1145 187 335 53 76 chr15 73506207 73506378 -29988596 - L2c LINE L2 -61 3326 3160 8 1145 423 0 0 0 chr15 73506711 73506758 -29988216 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 1145 308 255 85 0 chr15 73507188 73507282 -29987692 - PB1D9 SINE Alu -1 119 18 1 1145 403 74 62 0 chr15 73507293 73507374 -29987600 + (TTA)n Simple_repeat Simple_repeat 2 87 0 1 1145 590 232 32 0 chr15 73507377 73507502 -29987472 - ID_B1 SINE B4 -2 222 94 1 1145 469 216 52 35 chr15 73507528 73507643 -29987331 - PB1D10 SINE Alu 0 117 1 1 1145 222 303 75 66 chr15 73507691 73507797 -29987177 + PB1D7 SINE Alu 1 107 -13 1 1145 1239 227 52 70 chr15 73507835 73508275 -29986699 - RMER10A LTR ERVL -10 432 1 1 1145 450 53 0 0 chr15 73508296 73508353 -29986621 + (CAAAG)n Simple_repeat Simple_repeat 1 57 0 1 1145 225 241 0 18 chr15 73508655 73508710 -29986264 + (CCCCAG)n Simple_repeat Simple_repeat 4 57 0 1 1145 344 145 0 5 chr15 73508885 73508950 -29986024 - B2_Mm2 SINE B2 -107 109 47 1 1145 1169 108 72 0 chr15 73509001 73509168 -29985806 - B2_Mm1t SINE B2 -14 179 1 1 1145 388 304 53 46 chr15 73509177 73509308 -29985666 + RSINE1 SINE B4 34 165 0 2 1145 936 153 0 26 chr15 73509362 73509505 -29985469 + B1_Mur4 SINE Alu 1 140 -10 2 1145 324 0 0 0 chr15 73509505 73509541 -29985433 + (TTAA)n Simple_repeat Simple_repeat 4 39 0 2 1145 543 223 65 208 chr15 73511343 73511603 -29983371 - ID_B1 SINE B4 -1 223 1 2 1145 293 250 35 61 chr15 73511608 73511723 -29983251 - PB1D7 SINE Alu 0 120 9 2 1145 330 87 0 0 chr15 73512172 73512218 -29982756 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 2 1145 827 190 0 7 chr15 73512259 73512397 -29982577 - B1_Mus1 SINE Alu -10 138 2 2 1145 529 194 17 0 chr15 73512468 73512581 -29982393 - B3 SINE B2 -40 176 62 2 1145 243 150 0 0 chr15 73513565 73513605 -29981369 + B1_Mur1 SINE Alu 70 109 -40 2 1145 470 172 0 33 chr15 73513594 73513684 -29981290 + B3 SINE B2 44 130 -86 2 1145 207 0 0 0 chr15 73513705 73513728 -29981246 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 3 1145 618 178 181 84 chr15 73513750 73513916 -29981058 + B3 SINE B2 30 211 -5 3 1145 222 91 0 0 chr15 73513917 73513950 -29981024 + (CTAA)n Simple_repeat Simple_repeat 1 33 0 3 1145 242 276 17 0 chr15 73514477 73514535 -29980439 + ID_B1 SINE B4 82 140 -84 3 1145 466 248 0 35 chr15 73514487 73514600 -29980374 + PB1D7 SINE Alu 12 120 0 3 1145 495 87 0 0 chr15 73514600 73514669 -29980305 + (GGAA)n Simple_repeat Simple_repeat 4 72 0 3 1145 207 262 143 53 chr15 73514950 73515083 -29979891 - MIRb SINE MIR -79 189 45 3 1145 249 33 0 0 chr15 73516250 73516280 -29978694 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1145 336 295 35 18 chr15 73516281 73516327 -29978647 - PB1 SINE Alu -11 116 71 3 1145 1466 74 15 26 chr15 73516327 73516522 -29978452 - B2_Mm2 SINE B2 -2 193 1 3 1145 336 295 35 18 chr15 73516522 73516589 -29978385 - PB1 SINE Alu -57 70 1 3 1145 943 236 9 28 chr15 73516600 73516651 -29978323 - B3 SINE B2 -1 215 168 4 1145 186 43 0 0 chr15 73516651 73516674 -29978300 + (TATG)n Simple_repeat Simple_repeat 4 26 0 4 1145 943 236 9 28 chr15 73516674 73516840 -29978134 - B3 SINE B2 -49 167 2 4 1145 234 349 70 19 chr15 73516978 73517154 -29977820 + MIRb SINE MIR 4 188 -80 4 1145 270 0 0 0 chr15 73517711 73517741 -29977233 + (CTGTG)n Simple_repeat Simple_repeat 3 32 0 4 1145 225 256 0 0 chr15 73518441 73518523 -29976451 + (TG)n Simple_repeat Simple_repeat 2 83 0 4 1145 284 278 104 60 chr15 73518805 73518914 -29976060 + MTEb LTR MaLR 210 324 -55 4 1145 1516 54 27 0 chr15 73518914 73519099 -29975875 - B2_Mm1a SINE B2 -2 191 2 4 1145 284 278 104 60 chr15 73519099 73519123 -29975851 + MTEb LTR MaLR 325 348 -31 4 1145 572 269 6 24 chr15 73519141 73519305 -29975669 - RSINE1 SINE B4 0 165 5 4 1145 258 254 13 53 chr15 73519378 73519453 -29975521 - MTE-int LTR MaLR -939 641 570 4 1145 361 237 100 50 chr15 73519467 73519587 -29975387 - MTEb LTR MaLR -169 210 85 4 1145 366 246 0 28 chr15 73519719 73519899 -29975075 + (CATATA)n Simple_repeat Simple_repeat 4 178 0 5 1145 451 315 0 24 chr15 73519922 73520091 -29974883 + (CATA)n Simple_repeat Simple_repeat 2 166 0 5 1145 311 236 0 40 chr15 73520163 73520238 -29974736 - PB1D10 SINE Alu -2 115 44 5 1145 345 230 14 0 chr15 73524341 73524415 -29970559 + (CAGAGA)n Simple_repeat Simple_repeat 3 77 0 5 1145 243 0 0 0 chr15 73525266 73525293 -29969681 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1145 7231 33 2 1 chr15 73529142 73530072 -29964902 - MTA_Mm-int LTR MaLR -167 931 1 5 1145 3511 28 2 0 chr15 73530072 73530467 -29964507 - MTA_Mm LTR MaLR 0 396 1 5 1145 614 171 51 0 chr15 73530467 73530584 -29964390 + B1_Mur1 SINE Alu 12 134 -15 5 1145 471 160 0 0 chr15 73530584 73530678 -29964296 + (TG)n Simple_repeat Simple_repeat 2 95 0 5 1145 252 0 0 0 chr15 73530675 73530703 -29964271 + (TTG)n Simple_repeat Simple_repeat 2 29 0 5 1145 376 176 63 42 chr15 73530846 73530941 -29964033 - RMER10A LTR ERVL -25 417 321 5 1145 442 291 40 97 chr15 73531022 73531322 -29963652 - RMER10A LTR ERVL -148 294 12 5 143 744 150 0 0 chr15 73531322 73531449 -29963525 + (TTTC)n Simple_repeat Simple_repeat 3 129 0 6 1146 1132 62 0 33 chr15 73531449 73531600 -29963374 - B1_Mm SINE Alu 0 147 2 6 1146 513 0 0 0 chr15 73531921 73531978 -29962996 + (TTCC)n Simple_repeat Simple_repeat 3 59 0 6 1146 975 32 0 0 chr15 73532250 73532374 -29962600 - B1_Mm SINE Alu 0 147 24 6 1146 1243 109 11 11 chr15 73532375 73532561 -29962413 - B2_Mm1t SINE B2 -5 188 3 6 1146 1305 69 0 0 chr15 73532688 73532861 -29962113 + (TTCTCC)n Simple_repeat Simple_repeat 3 175 0 6 1146 1130 82 0 7 chr15 73532861 73533000 -29961974 - B1_Mus1 SINE Alu -8 140 2 6 1146 1474 98 0 0 chr15 73533001 73533194 -29961780 - B2_Mm2 SINE B2 -2 193 1 6 1146 545 265 44 7 chr15 73534825 73534962 -29960012 - B1F SINE Alu -7 142 1 6 1146 204 353 70 42 chr15 73535729 73535871 -29959103 - MIRb SINE MIR -82 186 41 6 1146 372 218 178 0 chr15 73536417 73536518 -29958456 + B1F SINE Alu 24 142 -7 7 1146 393 22 0 0 chr15 73536522 73536568 -29958406 + (CCAA)n Simple_repeat Simple_repeat 2 47 0 7 1146 245 301 49 56 chr15 73536614 73536758 -29958216 + B1F SINE Alu 5 147 -2 7 1146 216 257 29 0 chr15 73537936 73538006 -29956968 + G-rich Low_complexity Low_complexity 2 73 0 7 1146 971 122 13 20 chr15 73539659 73539809 -29955165 + B1_Mur4 SINE Alu 1 149 -1 7 1146 188 312 16 0 chr15 73539930 73539994 -29954980 - MIRc SINE MIR -148 120 56 7 1146 579 126 56 12 chr15 73540903 73541227 -29953747 + (TG)n Simple_repeat Simple_repeat 1 338 0 7 1146 592 300 20 20 chr15 73541236 73541432 -29953542 - B3A SINE B2 -13 203 8 7 1146 436 319 19 0 chr15 73542279 73542416 -29952558 + B1F1 SINE Alu 1 141 -8 7 1146 527 301 15 11 chr15 73542423 73542570 -29952404 + RSINE1 SINE B4 2 150 -15 7 1146 234 143 0 0 chr15 73542977 73543026 -29951948 + (TC)n Simple_repeat Simple_repeat 2 50 0 8 1146 777 167 20 27 chr15 73543027 73543175 -29951799 - B1_Mus1 SINE Alu -1 147 1 8 1146 1081 96 94 17 chr15 73544634 73544815 -29950159 - B2_Mm2 SINE B2 0 195 1 8 1146 268 317 68 20 chr15 73544850 73544998 -29949976 + MIR SINE MIR 46 200 -62 8 1146 1729 203 63 23 chr15 73545759 73546157 -29948817 + RMER10A LTR ERVL 1 414 -28 8 1146 420 20 0 0 chr15 73546157 73546206 -29948768 + (TC)n Simple_repeat Simple_repeat 2 50 0 8 1146 23 0 0 0 chr15 73547157 73547180 -29947794 + GC_rich Low_complexity Low_complexity 1 23 0 8 1146 1236 62 0 0 chr15 73548077 73548302 -29946672 + (CA)n Simple_repeat Simple_repeat 1 225 0 8 1146 1274 93 0 45 chr15 73548322 73548524 -29946450 - B2_Mm2 SINE B2 -1 194 2 8 1146 403 227 134 0 chr15 73548684 73548803 -29946171 - L1MA4 LINE L1 -410 5890 5756 8 1146 832 174 6 45 chr15 73549671 73549827 -29945147 + B1_Mur4 SINE Alu 1 150 0 9 1146 261 0 0 0 chr15 73549855 73549884 -29945090 + (CCA)n Simple_repeat Simple_repeat 1 29 0 9 1146 1463 121 4 63 chr15 73550797 73550887 -29944087 + URR1B DNA MER1_type 1 88 -137 9 1146 1248 100 0 50 chr15 73550887 73551087 -29943887 - B2_Mm2 SINE B2 -3 192 3 9 1146 1463 121 4 63 chr15 73551087 73551235 -29943739 + URR1B DNA MER1_type 89 225 0 9 1146 236 255 102 68 chr15 73552290 73552408 -29942566 + MLT1F1 LTR MaLR 342 463 -106 9 1146 1222 27 7 7 chr15 73554166 73554313 -29940661 + B1_Mm SINE Alu 1 147 0 9 1146 25 0 0 0 chr15 73554691 73554716 -29940258 + GC_rich Low_complexity Low_complexity 1 25 0 9 1146 33 85 0 0 chr15 73555289 73555371 -29939603 + GC_rich Low_complexity Low_complexity 1 82 0 9 1146 25 0 0 0 chr15 73555385 73555410 -29939564 + GC_rich Low_complexity Low_complexity 1 25 0 9 1146 421 211 12 18 chr15 73556836 73556954 -29938020 + B2_Mm2 SINE B2 1 119 -97 9 1146 584 158 218 32 chr15 73557320 73557444 -29937530 - B1_Mus1 SINE Alu -1 147 1 1 1146 485 91 0 0 chr15 73559597 73559663 -29935311 + U4 snRNA snRNA 5 70 -75 1 1146 184 91 22 22 chr15 73560147 73560192 -29934782 + (TGGGGG)n Simple_repeat Simple_repeat 2 46 0 1 1146 209 270 0 73 chr15 73561583 73561651 -29933323 + L2a LINE L2 3279 3341 -85 1 1146 405 0 0 0 chr15 73561853 73561898 -29933076 + (TC)n Simple_repeat Simple_repeat 1 45 0 1 1146 483 134 0 0 chr15 73566291 73566373 -29928601 + (TC)n Simple_repeat Simple_repeat 2 83 0 1 1146 374 256 77 9 chr15 73566742 73566892 -29928082 + L1MB8 LINE L1 5735 5895 -288 1 1146 223 265 3 7 chr15 73566980 73567049 -29927925 - ID4_ SINE ID -10 73 6 1 1146 352 330 0 0 chr15 73567067 73567158 -29927816 - PB1D7 SINE Alu -8 112 22 1 1146 276 130 0 0 chr15 73567206 73567252 -29927722 + (ATTG)n Simple_repeat Simple_repeat 2 47 0 1 1146 593 215 0 0 chr15 73567253 73567360 -29927614 - RSINE1 SINE B4 -53 112 6 1 1146 211 214 0 0 chr15 73567363 73567405 -29927569 - B1F2 SINE Alu -107 42 1 1 1146 891 294 65 29 chr15 73567561 73567838 -29927136 - B4 SINE B4 -1 291 5 1 1146 189 0 0 0 chr15 73567838 73567859 -29927115 + (CCA)n Simple_repeat Simple_repeat 1 21 0 1 1146 211 282 49 37 chr15 73567908 73567989 -29926985 - 7SLRNA srpRNA srpRNA -226 88 7 1 1146 580 182 57 16 chr15 73568050 73568173 -29926801 + ID_B1 SINE B4 94 221 -3 1 1146 188 256 34 68 chr15 73569469 73569557 -29925417 - MIRm SINE MIR -126 150 66 1 1146 210 196 0 89 chr15 73570599 73570655 -29924319 + MIRm SINE MIR 102 152 -124 1 1146 259 282 103 0 chr15 73570626 73570704 -29924270 + MIRb SINE MIR 124 209 -59 1 1146 822 140 254 12 chr15 73571677 73571850 -29923124 + B3 SINE B2 2 216 0 1 1146 1207 138 38 9 chr15 73573002 73573214 -29921760 + URR1B DNA MER1_type 1 218 -7 1 1146 228 111 0 0 chr15 73575824 73575860 -29919114 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 1 1146 980 141 50 11 chr15 73576071 73576251 -29918723 + B2_Mm2 SINE B2 1 187 -8 1 1146 180 256 122 0 chr15 73576722 73576812 -29918162 + L2c LINE L2 3132 3232 -155 1 1146 279 0 0 0 chr15 73577424 73577455 -29917519 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1146 32 86 0 0 chr15 73578784 73578865 -29916109 + GC_rich Low_complexity Low_complexity 1 81 0 1 1146 192 385 89 8 chr15 73579264 73579387 -29915587 + MIRc SINE MIR 25 157 -111 1 1146 732 178 29 22 chr15 73579713 73579851 -29915123 + B1_Mur3 SINE Alu 3 141 -8 1 1146 259 257 64 45 chr15 73580826 73580936 -29914038 - MIR3 SINE MIR -31 177 66 1 1146 233 53 0 50 chr15 73583187 73583227 -29911747 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 1 1146 195 42 0 0 chr15 73587737 73587761 -29907213 + (CTG)n Simple_repeat Simple_repeat 3 26 0 1 1146 235 331 39 70 chr15 73587872 73588028 -29906946 + MER21B LTR ERV1 135 285 -578 1 1146 2174 142 12 0 chr15 73588121 73588444 -29906530 - ORR1A2 LTR MaLR 0 327 1 1 1146 367 141 164 0 chr15 73588807 73588917 -29906057 - B2_Mm2 SINE B2 0 193 47 1 1146 944 104 0 0 chr15 73588987 73589122 -29905852 - B2_Mm1t SINE B2 -22 171 37 1 1146 810 205 25 59 chr15 73589150 73589352 -29905622 - B2_Mm2 SINE B2 0 195 1 1 1146 304 315 26 26 chr15 73589644 73589758 -29905216 - L1MEe LINE L1 -4035 819 706 1 1146 378 107 0 0 chr15 73589765 73589821 -29905153 + (TC)n Simple_repeat Simple_repeat 2 57 0 1 1146 1133 63 35 0 chr15 73589827 73589969 -29905005 - B1_Mus2 SINE Alu 0 147 1 1 1146 384 71 0 0 chr15 73590471 73590527 -29904447 + (T)n Simple_repeat Simple_repeat 1 56 0 1 1146 255 258 0 16 chr15 73592953 73593016 -29901958 + (TGGG)n Simple_repeat Simple_repeat 3 64 0 1 1146 507 95 0 0 chr15 73593034 73593108 -29901866 + (TATG)n Simple_repeat Simple_repeat 1 74 0 1 1146 219 231 30 30 chr15 73594073 73594140 -29900834 - MIRc SINE MIR -121 147 81 1 1146 182 362 23 70 chr15 73594471 73594557 -29900417 - MIR3 SINE MIR -19 189 108 1 1146 1588 184 12 33 chr15 73596010 73596341 -29898633 - ORR1D1 LTR MaLR -50 324 1 1 1146 283 232 0 0 chr15 73596375 73596431 -29898543 - RMER20B LTR ERVK -392 235 180 1 1146 267 31 0 0 chr15 73597424 73597456 -29897518 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1146 424 322 167 29 chr15 73597510 73597756 -29897218 - B4 SINE B4 -12 280 1 1 1146 426 105 57 0 chr15 73597921 73598026 -29896948 + (CCCCAG)n Simple_repeat Simple_repeat 1 111 0 1 1146 261 258 0 2 chr15 73598165 73598249 -29896725 - L1M3 LINE L1 -268 5903 5821 1 1146 528 230 35 121 chr15 73598351 73598549 -29896425 + MTEb LTR MaLR 199 379 0 1 1146 213 39 0 0 chr15 73598576 73598602 -29896372 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 1 1146 393 277 83 49 chr15 73598860 73599004 -29895970 - B1F SINE Alu 0 149 1 1 1146 851 182 7 20 chr15 73600761 73600897 -29894077 + B1_Mus1 SINE Alu 5 141 -7 1 1146 189 0 0 0 chr15 73600897 73600918 -29894056 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 1146 2012 185 10 20 chr15 73601138 73601536 -29893438 + MTB_Mm LTR MaLR 1 394 -13 1 1146 236 315 23 61 chr15 73601603 73601662 -29893312 + MLT1B LTR MaLR 119 179 -211 1 1146 900 163 0 39 chr15 73601662 73601815 -29893159 + B1_Mur3 SINE Alu 3 149 0 1 1146 236 315 23 61 chr15 73601815 73601887 -29893087 + MLT1B LTR MaLR 180 245 -145 1 1146 479 343 94 146 chr15 73604612 73604685 -29890289 - MER2 DNA MER2_type -1 344 276 1 1146 629 236 36 0 chr15 73604685 73604825 -29890149 + B1F SINE Alu 3 147 -2 1 1146 479 343 94 146 chr15 73604825 73605113 -29889861 - MER2 DNA MER2_type -70 275 2 1 1146 1059 104 0 0 chr15 73605225 73605487 -29889487 + (CA)n Simple_repeat Simple_repeat 1 262 0 1 1146 261 75 0 0 chr15 73605487 73605527 -29889447 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 1146 591 208 33 59 chr15 73605816 73605969 -29889005 + B3A SINE B2 2 150 -48 1 1146 441 0 0 0 chr15 73605969 73606018 -29888956 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1146 417 263 51 112 chr15 73606018 73606061 -29888913 + B2_Mm2 SINE B2 140 185 -10 1 1146 574 311 55 0 chr15 73606166 73606330 -29888644 - B3A SINE B2 -17 181 9 1 1146 234 167 0 0 chr15 73606433 73606481 -29888493 + L1M5 LINE L1 4649 4696 -1450 1 1146 616 281 45 45 chr15 73606832 73607134 -29887840 + B4A SINE B4 7 292 0 1 1146 486 0 0 0 chr15 73607442 73607496 -29887478 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1146 432 0 0 0 chr15 73607496 73607543 -29887431 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 1146 298 303 10 22 chr15 73607766 73607872 -29887102 - B1F2 SINE Alu -7 142 39 1 1146 1450 84 11 0 chr15 73607971 73608161 -29886813 - B2_Mm1a SINE B2 -1 192 1 1 1146 1179 70 0 0 chr15 73608378 73608521 -29886453 + B1_Mus2 SINE Alu 3 145 -2 1 1146 574 336 104 93 chr15 73608964 73609022 -29885952 + L1MC4 LINE L1 166 238 -5977 1 1146 180 0 0 0 chr15 73609022 73609042 -29885932 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 1146 574 336 104 93 chr15 73609042 73609371 -29885603 + L1MC4 LINE L1 239 563 -5652 1 1146 351 0 0 0 chr15 73609371 73609410 -29885564 + (GGAA)n Simple_repeat Simple_repeat 1 39 0 1 1146 574 336 104 93 chr15 73609410 73609602 -29885372 + L1MC4 LINE L1 564 744 -5471 1 1146 1820 148 168 9 chr15 73609602 73609930 -29885044 + ORR1C2 LTR MaLR 5 384 0 1 1146 574 336 104 93 chr15 73609930 73609972 -29885002 + L1MC4 LINE L1 745 795 -5420 1 1146 474 122 0 0 chr15 73609972 73610046 -29884928 - ORR1A2-int LTR MaLR -1889 74 1 1 1146 2211 104 62 0 chr15 73610046 73610354 -29884620 - ORR1A2 LTR MaLR 0 327 1 1 1146 230 232 319 28 chr15 73610851 73611064 -29883910 - L2 LINE L2 -2672 747 473 1 1146 1158 128 0 0 chr15 73611895 73612137 -29882837 + (TCCA)n Simple_repeat Simple_repeat 1 242 0 1 1146 183 369 0 0 chr15 73612810 73612875 -29882099 - L3 LINE CR1 -12 4477 4413 1 1146 22 0 0 0 chr15 73614311 73614333 -29880641 + AT_rich Low_complexity Low_complexity 1 22 0 1 1146 675 144 0 0 chr15 73614466 73614563 -29880411 + B1_Mus1 SINE Alu 3 99 -49 1 1146 330 195 5 67 chr15 73614569 73615202 -29879772 + G-rich Low_complexity Low_complexity 1 593 0 1 1146 390 321 55 0 chr15 73616894 73617003 -29877971 - RSINE1 SINE B4 0 165 51 1 1146 1048 127 192 6 chr15 73618585 73618767 -29876207 - B3 SINE B2 0 216 1 1 1146 183 326 133 0 chr15 73623864 73623962 -29871012 + L2b LINE L2 3260 3370 -5 1 1146 1329 187 32 4 chr15 73624228 73624475 -29870499 + ORR1D1-int LTR MaLR 1117 1370 0 1 1146 1945 177 50 22 chr15 73624475 73624839 -29870135 + ORR1D1 LTR MaLR 1 374 0 1 1146 317 274 0 12 chr15 73624911 73624996 -29869978 + B4A SINE B4 1 84 -208 1 1146 261 0 0 0 chr15 73625004 73625033 -29869941 + (CAACC)n Simple_repeat Simple_repeat 5 33 0 1 1146 387 41 0 0 chr15 73625266 73625315 -29869659 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1146 375 23 0 0 chr15 73625476 73625520 -29869454 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1146 360 0 0 0 chr15 73626102 73626142 -29868832 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1146 206 178 59 44 chr15 73626504 73626639 -29868335 + (TA)n Simple_repeat Simple_repeat 1 137 0 1 1146 246 32 0 0 chr15 73626641 73626672 -29868302 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1146 892 192 54 0 chr15 73626672 73626839 -29868135 + B3 SINE B2 3 178 -38 1 1146 399 165 76 0 chr15 73626838 73626917 -29868057 - RSINE1 SINE B4 -51 114 30 1 1146 198 0 0 0 chr15 73627143 73627165 -29867809 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1146 256 302 25 41 chr15 73627631 73627752 -29867222 + LTR31 LTR ERV1 480 598 -21 1 1146 254 250 31 0 chr15 73627948 73628012 -29866962 - B1F2 SINE Alu -50 99 34 1 1146 288 289 39 58 chr15 73628139 73628345 -29866629 - L1M5 LINE L1 -3194 2952 2751 2 1146 276 281 53 24 chr15 73628727 73628854 -29866120 - MIR SINE MIR -27 181 49 2 1146 188 227 44 22 chr15 73629021 73629066 -29865908 - L2c LINE L2 -22 3365 3320 2 1146 235 195 214 22 chr15 73629051 73629140 -29865834 + MIRc SINE MIR 46 151 -117 2 1146 214 294 68 76 chr15 73629464 73629582 -29865392 + MIRc SINE MIR 16 132 -136 2 1146 186 43 0 0 chr15 73631583 73631606 -29863368 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1146 765 271 59 49 chr15 73631984 73632271 -29862703 + B4 SINE B4 3 292 0 2 1146 1067 223 188 26 chr15 73632448 73632793 -29862181 - MTD LTR MaLR -1 418 18 2 1146 851 314 99 36 chr15 73632987 73633453 -29861521 + MER21B LTR ERV1 248 742 -121 2 1146 658 223 16 0 chr15 73633916 73634037 -29860937 + B3A SINE B2 1 123 -75 2 1146 378 0 0 0 chr15 73634051 73634093 -29860881 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1146 374 306 131 22 chr15 73634159 73634296 -29860678 - RSINE1 SINE B4 -11 154 3 2 1146 1094 71 103 13 chr15 73634453 73634609 -29860365 - B2_Mm2 SINE B2 -24 171 2 2 1146 210 118 0 0 chr15 73634617 73634651 -29860323 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2 1146 266 282 25 17 chr15 73634890 73635009 -29859965 + L1MA4 LINE L1 1610 1729 -5120 2 1146 1340 80 11 0 chr15 73635112 73635288 -29859686 + B2_Mm1t SINE B2 2 179 -14 2 1146 848 134 7 36 chr15 73635620 73635759 -29859215 - B1_Mur4 SINE Alu -1 149 15 2 1146 239 300 92 108 chr15 73636337 73636553 -29858421 + L1MA4 LINE L1 3493 3719 -3126 2 1146 228 135 0 0 chr15 73636553 73636590 -29858384 + (CAT)n Simple_repeat Simple_repeat 1 37 0 2 1146 239 300 92 108 chr15 73636590 73636829 -29858145 + L1MA4 LINE L1 3720 3941 -2904 2 1146 1481 218 71 128 chr15 73636834 73637328 -29857646 + RLTR18B LTR ERVK 43 508 -4 2 1146 392 258 233 42 chr15 73637329 73637689 -29857285 + L1MA4 LINE L1 3934 4362 -2480 2 1146 281 245 120 60 chr15 73637689 73637789 -29857185 - ORR1E LTR MaLR -4 375 270 2 1146 300 271 90 35 chr15 73637809 73637974 -29857000 - ORR1E LTR MaLR -173 201 1 2 1146 459 0 0 0 chr15 73637996 73638047 -29856927 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1146 381 70 0 0 chr15 73638047 73638103 -29856871 + (CAGAGA)n Simple_repeat Simple_repeat 4 60 0 2 1146 7851 65 3 1 chr15 73638150 73639875 -29855099 + MusHAL1 LINE L1 20 1747 -1606 2 1146 22 0 0 0 chr15 73639875 73639897 -29855077 + AT_rich Low_complexity Low_complexity 1 22 0 2 1146 11935 48 12 1 chr15 73640363 73641967 -29853007 + MusHAL1 LINE L1 1732 3353 0 2 1146 547 125 37 46 chr15 73642009 73642085 -29852889 + ORR1D1 LTR MaLR 1 75 -299 2 1146 3114 55 39 0 chr15 73642085 73642470 -29852504 + MTB LTR MaLR 1 400 0 2 1146 547 125 37 46 chr15 73642470 73642502 -29852472 + ORR1D1 LTR MaLR 76 108 -266 2 1146 2027 81 87 3 chr15 73642619 73642930 -29852044 + Lx3_Mus LINE L1 6396 6732 -277 2 1146 929 257 19 0 chr15 73643233 73643443 -29851531 - B3 SINE B2 0 216 3 2 1146 417 237 11 21 chr15 73643608 73643703 -29851271 + ORR1C2 LTR MaLR 55 148 -219 2 1146 5198 224 81 21 chr15 73643694 73644957 -29850017 + ORR1C2-int LTR MaLR 32 1369 -1 2 1146 1731 201 34 31 chr15 73644958 73645339 -29849635 + ORR1C2 LTR MaLR 1 382 -2 2 1146 2585 286 45 40 chr15 73645339 73645787 -29849187 + L1MA4 LINE L1 4477 4930 -1915 2 1146 1098 165 95 24 chr15 73645787 73645998 -29848976 - URR1A DNA MER1_type 0 226 1 2 1146 2585 286 45 40 chr15 73645998 73646837 -29848137 + L1MA4 LINE L1 4931 5770 -1075 2 1146 1772 218 57 112 chr15 73646843 73647406 -29847568 - RMER5 LTR ERV1 -2 532 1 2 1146 917 292 37 29 chr15 73647408 73647786 -29847188 + L1_Mur3 LINE L1 5040 5420 -460 2 1146 913 228 238 24 chr15 73647818 73648146 -29846828 - MTD LTR MaLR -21 398 1 2 1146 796 307 77 27 chr15 73648155 73648597 -29846377 + L1MA4 LINE L1 6177 6640 -362 2 1146 227 311 19 19 chr15 73650256 73650361 -29844613 + (TCCA)n Simple_repeat Simple_repeat 3 107 0 2 1146 356 296 74 0 chr15 73650365 73650473 -29844501 + MIRb SINE MIR 73 188 -80 2 1146 223 250 0 0 chr15 73651039 73651083 -29843891 + (TCCA)n Simple_repeat Simple_repeat 2 45 0 2 1146 363 23 0 0 chr15 73652087 73652131 -29842843 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1146 1051 269 21 4 chr15 73652169 73652412 -29842562 + RCHARR1 DNA MER1_type 5 251 -723 2 1146 475 155 24 0 chr15 73652403 73652487 -29842487 + RCHARR1 DNA MER1_type 376 461 -513 2 1146 648 244 13 6 chr15 73652488 73652645 -29842329 + RCHARR1 DNA MER1_type 748 905 -69 2 1146 319 212 188 0 chr15 73652653 73652733 -29842241 + RCHARR1 DNA MER1_type 872 966 -8 2 1146 441 0 0 0 chr15 73652822 73652871 -29842103 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 1146 344 70 0 0 chr15 73654068 73654111 -29840863 + L1Md_F2 LINE L1 5544 5586 -297 2 1146 8359 27 24 6 chr15 73654112 73655090 -29839884 + L1Md_F2 LINE L1 5588 6582 0 2 1146 189 0 0 0 chr15 73655101 73655122 -29839852 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1146 345 279 46 0 chr15 73655187 73655297 -29839677 + B1_Mur1 SINE Alu 25 148 -1 2 1146 387 0 0 0 chr15 73655758 73655801 -29839173 + (TGG)n Simple_repeat Simple_repeat 2 44 0 2 1146 381 326 88 50 chr15 73655904 73656294 -29838680 + L1MEg LINE L1 1773 2182 -4218 2 1146 456 252 39 0 chr15 73656439 73656542 -29838432 + PB1D10 SINE Alu 11 117 0 2 1146 842 189 134 5 chr15 73656553 73656739 -29838235 + B3 SINE B2 1 210 -6 2 1146 399 278 21 0 chr15 73656818 73656915 -29838059 + RSINE1 SINE B4 3 101 -64 2 1146 241 192 53 27 chr15 73656951 73657026 -29837948 + Lx7 LINE L1 7620 7696 0 2 1146 226 254 16 98 chr15 73657042 73657164 -29837810 + L1MEg LINE L1 3347 3458 -2861 2 1146 502 206 29 10 chr15 73657408 73657511 -29837463 - PB1D9 SINE Alu -14 106 2 2 1146 384 269 239 21 chr15 73657633 73657872 -29837102 + L1MD LINE L1 3835 4125 -2021 2 1146 222 300 130 43 chr15 73657937 73658052 -29836922 - ID_B1 SINE B4 -98 126 2 2 1146 252 292 74 51 chr15 73658056 73658312 -29836662 + L1MD LINE L1 4849 5110 -1036 2 1146 361 277 66 15 chr15 73659228 73659389 -29835585 + L2a LINE L2 2931 3092 -283 2 1146 702 215 123 80 chr15 73659393 73659580 -29835394 - B3A SINE B2 0 195 1 2 1146 253 268 48 12 chr15 73660079 73660162 -29834812 + MLT1A LTR MaLR 74 159 -215 2 1146 428 275 0 23 chr15 73660634 73660779 -29834195 + (TATATG)n Simple_repeat Simple_repeat 4 148 0 2 1146 189 0 0 0 chr15 73660779 73660800 -29834174 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1146 428 275 0 23 chr15 73660800 73660825 -29834149 + (TATATG)n Simple_repeat Simple_repeat 6 27 0 2 1146 378 360 57 17 chr15 73661908 73662083 -29832891 + MIRb SINE MIR 64 245 -23 2 1147 227 350 29 10 chr15 73662717 73662821 -29832153 + MLT1A LTR MaLR 179 284 -81 2 1147 293 247 122 12 chr15 73663008 73663090 -29831884 + MER63D DNA AcHobo 1 91 -970 2 1147 1760 10 0 0 chr15 73663185 73663384 -29831590 - L1Md_A LINE L1 0 6582 6384 2 1147 201 242 81 0 chr15 73663659 73663721 -29831253 - MIRc SINE MIR -174 94 28 2 1147 207 100 0 0 chr15 73664154 73664184 -29830790 + (T)n Simple_repeat Simple_repeat 1 30 0 2 1147 753 294 74 17 chr15 73664639 73665262 -29829712 + L1MA7 LINE L1 5261 5926 -242 2 1147 194 212 47 70 chr15 73665465 73665551 -29829423 - L2 LINE L2 -478 2941 2858 2 1147 735 274 184 17 chr15 73667659 73668061 -29826913 + L2b LINE L2 1816 2284 -1135 2 1147 428 174 8 34 chr15 73668080 73668199 -29826775 + CT-rich Low_complexity Low_complexity 4 119 0 2 1147 190 243 0 14 chr15 73668212 73668283 -29826691 + L2b LINE L2 2254 2323 -1096 2 1147 261 250 28 42 chr15 73669038 73669109 -29825865 + L2b LINE L2 3288 3357 -18 2 1147 978 122 0 0 chr15 73671245 73671425 -29823549 + (GGA)n Simple_repeat Simple_repeat 1 180 0 2 1147 740 139 0 11 chr15 73671449 73671631 -29823343 + (GGA)n Simple_repeat Simple_repeat 1 180 0 2 1147 831 127 0 0 chr15 73671663 73671836 -29823138 + (CAG)n Simple_repeat Simple_repeat 2 174 0 2 1147 302 285 104 16 chr15 73672338 73672463 -29822511 + MER5C DNA MER1_type 107 242 -71 2 1147 228 285 134 31 chr15 73672592 73672719 -29822255 - L2a LINE L2 -248 3178 3039 2 1147 1103 219 28 209 chr15 73673705 73674168 -29820806 - MTE2a LTR MaLR 0 379 1 2 1147 824 226 7 0 chr15 73674181 73674327 -29820647 + B1_Mur1 SINE Alu 1 147 -2 2 1147 180 0 0 0 chr15 73674620 73674640 -29820334 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 1147 228 264 38 89 chr15 73675781 73675860 -29819114 + MIR3 SINE MIR 103 177 -31 2 1147 306 0 0 0 chr15 73676206 73676240 -29818734 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1147 594 0 0 0 chr15 73676240 73676306 -29818668 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 1147 182 292 160 0 chr15 73679192 73679298 -29815676 + MIRc SINE MIR 21 143 -125 2 1147 214 281 0 17 chr15 73683215 73683273 -29811701 + MIR3 SINE MIR 111 167 -41 2 1147 329 274 52 52 chr15 73683477 73683612 -29811362 + MIRb SINE MIR 113 247 -21 2 1147 200 200 0 0 chr15 73684488 73684528 -29810446 - MIR SINE MIR -65 143 104 2 1147 396 0 0 0 chr15 73685447 73685491 -29809483 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1147 294 280 20 0 chr15 73685511 73685611 -29809363 + (CA)n Simple_repeat Simple_repeat 2 103 0 2 1147 238 373 42 8 chr15 73686035 73686154 -29808820 - MLT1B LTR MaLR -264 126 4 2 1147 1368 247 78 21 chr15 73688722 73689114 -29805860 + MTD LTR MaLR 12 405 -14 2 1147 388 272 11 0 chr15 73690534 73690626 -29804348 - PB1D10 SINE Alu -3 114 22 2 1147 279 262 25 127 chr15 73691552 73691670 -29803304 - MLT1A0 LTR MaLR 0 365 260 2 1147 402 301 96 0 chr15 73693264 73693430 -29801544 - MTEa LTR MaLR 0 379 198 2 1147 1188 114 0 0 chr15 73694292 73694627 -29800347 + (TG)n Simple_repeat Simple_repeat 1 335 0 2 1147 588 84 0 0 chr15 73695772 73695855 -29799119 + (GGA)n Simple_repeat Simple_repeat 3 85 0 2 1147 371 262 42 24 chr15 73697646 73697814 -29797160 + (TAGA)n Simple_repeat Simple_repeat 2 172 0 2 1147 323 339 95 69 chr15 73698519 73698836 -29796138 - ORR1E LTR MaLR 0 359 35 2 1147 263 191 49 20 chr15 73699324 73699414 -29795560 - MIR SINE MIR -97 179 85 2 1147 254 348 0 25 chr15 73700182 73700300 -29794674 + (CATA)n Simple_repeat Simple_repeat 4 118 0 2 1147 261 0 0 0 chr15 73700344 73700373 -29794601 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 1147 528 16 0 0 chr15 73701803 73701864 -29793110 + (TCCA)n Simple_repeat Simple_repeat 2 62 0 2 1147 398 284 35 0 chr15 73701886 73702027 -29792947 + (TCCA)n Simple_repeat Simple_repeat 4 149 0 2 1147 432 37 0 0 chr15 73702037 73702091 -29792883 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 2 1147 550 236 12 16 chr15 73702120 73702381 -29792593 + (TCCA)n Simple_repeat Simple_repeat 1 259 0 2 1147 312 311 135 51 chr15 73702628 73702784 -29792190 + MIR SINE MIR 72 240 -22 2 1147 505 279 67 13 chr15 73703304 73703564 -29791410 - ORR1E LTR MaLR -18 361 50 2 1147 3050 26 42 3 chr15 73703590 73703943 -29791031 - IAPLTR1_Mm LTR ERVK 0 367 1 2 1147 53464 27 14 2 chr15 73703943 73710398 -29784576 - IAPEz-int LTR ERVK 0 6481 3 2 1147 3050 26 42 3 chr15 73710400 73710753 -29784221 - IAPLTR1_Mm LTR ERVK 0 367 1 2 1147 396 0 0 0 chr15 73710845 73710889 -29784085 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1147 232 317 165 8 chr15 73711221 73711342 -29783632 + MIRc SINE MIR 7 150 -118 3 1147 275 190 60 60 chr15 73715873 73715957 -29779017 - MIRc SINE MIR -125 143 60 3 1147 1094 82 6 12 chr15 73718759 73718919 -29776055 + B2_Mm2 SINE B2 1 159 -36 3 1147 321 47 0 0 chr15 73718924 73718967 -29776007 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 3 1147 1149 89 0 0 chr15 73720487 73720633 -29774341 + B1_Mm SINE Alu 2 147 0 3 1147 1263 34 0 0 chr15 73720665 73720811 -29774163 + B1_Mus2 SINE Alu 2 147 0 3 1147 237 240 0 0 chr15 73720834 73720884 -29774090 - MTD LTR MaLR -286 133 84 3 1147 2952 186 75 69 chr15 73720894 73721603 -29773371 - RMER1B Other Other -9 1057 345 3 1147 284 342 48 27 chr15 73721717 73721740 -29773234 - B4A SINE B4 -1 291 268 3 1147 357 24 0 0 chr15 73721740 73721782 -29773192 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1147 284 342 48 27 chr15 73721782 73721944 -29773030 - B4A SINE B4 -25 267 102 3 1147 393 109 0 0 chr15 73721948 73722012 -29772962 + (T)n Simple_repeat Simple_repeat 1 64 0 3 1147 1124 101 0 6 chr15 73722099 73722269 -29772705 + (TTC)n Simple_repeat Simple_repeat 3 171 0 3 1147 2004 161 23 78 chr15 73725471 73725869 -29769105 + ORR1C1 LTR MaLR 1 376 -2 3 1147 180 0 0 0 chr15 73726382 73726402 -29768572 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1147 1306 242 25 86 chr15 73726897 73727291 -29767683 - ORR1D2 LTR MaLR 0 370 1 3 1147 209 194 0 0 chr15 73730912 73730948 -29764026 + (CGTG)n Simple_repeat Simple_repeat 4 39 0 3 1147 275 283 128 37 chr15 73731488 73731675 -29763299 + MLT1B LTR MaLR 124 327 -63 3 1147 211 288 37 12 chr15 73735072 73735153 -29759821 - MIR3 SINE MIR -16 192 110 3 1147 253 110 11 89 chr15 73736273 73736363 -29758611 + C-rich Low_complexity Low_complexity 2 84 0 3 1147 380 332 64 118 chr15 73736529 73736743 -29758231 - ORR1D2 LTR MaLR 0 370 154 3 1147 1418 75 11 0 chr15 73736743 73736929 -29758045 + B2_Mm1t SINE B2 1 188 -5 3 1147 380 332 64 118 chr15 73736929 73737010 -29757964 - ORR1D2 LTR MaLR -217 153 87 3 1147 1476 151 0 22 chr15 73737010 73737240 -29757734 + URR1B DNA MER1_type 1 225 0 3 1147 380 332 64 118 chr15 73737240 73737332 -29757642 - ORR1D2 LTR MaLR -284 86 3 3 1147 243 335 90 26 chr15 73737470 73737626 -29757348 + MLT1A0 LTR MaLR 105 270 -95 3 1147 1979 190 76 13 chr15 73738217 73738611 -29756363 - MTD LTR MaLR 0 419 1 3 1147 1326 235 82 42 chr15 73741443 73741799 -29753175 - ORR1D2 LTR MaLR 0 370 1 3 1147 1653 208 42 16 chr15 73741834 73742249 -29752725 - ORR1D2-int LTR MaLR -191 1772 971 3 1147 901 271 14 0 chr15 73742593 73742800 -29752174 + ID_B1 SINE B4 3 212 -12 3 1147 330 26 0 0 chr15 73744550 73744589 -29750385 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1147 333 0 0 0 chr15 73744589 73744625 -29750349 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 1147 764 296 122 12 chr15 73744690 73744741 -29750233 - B4A SINE B4 -19 273 216 3 1147 240 35 0 0 chr15 73744741 73744770 -29750204 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 3 1147 764 296 122 12 chr15 73744770 73744964 -29750010 - B4A SINE B4 -77 215 2 3 1147 2365 83 0 79 chr15 73745602 73745957 -29749017 - ORR1A2 LTR MaLR 0 327 1 3 1147 1421 174 172 6 chr15 73748751 73749064 -29745910 - MTC LTR MaLR -1 420 56 3 1147 712 246 25 25 chr15 73750610 73750806 -29744168 - ORR1D2 LTR MaLR -26 344 149 3 1147 303 350 14 7 chr15 73751090 73751228 -29743746 + (TGGG)n Simple_repeat Simple_repeat 2 140 0 3 1147 759 186 0 0 chr15 73751252 73751413 -29743561 + (TGGA)n Simple_repeat Simple_repeat 3 163 0 3 1147 330 283 20 10 chr15 73751437 73751583 -29743391 + (TGGA)n Simple_repeat Simple_repeat 1 147 0 3 1147 209 272 131 3 chr15 73751823 73751939 -29743035 + MIRc SINE MIR 46 173 -35 3 1147 301 253 32 0 chr15 73754972 73755067 -29739907 + MER20 DNA MER1_type 48 145 -74 3 1147 1127 58 0 7 chr15 73755820 73755959 -29739015 + B1_Mm SINE Alu 1 138 -9 3 1147 253 0 54 0 chr15 73755959 73755996 -29738978 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1147 215 293 0 0 chr15 73757466 73757524 -29737450 + GA-rich Low_complexity Low_complexity 3 60 0 3 1147 265 198 6 0 chr15 73757827 73757897 -29737077 - MIRm SINE MIR -85 183 113 3 1147 241 266 152 30 chr15 73758611 73758743 -29736231 + ORR1E LTR MaLR 69 216 -143 3 1147 587 333 37 9 chr15 73758886 73759101 -29735873 + MTE-int LTR MaLR 22 242 -1338 3 1147 1013 254 215 41 chr15 73759115 73759575 -29735399 - RMER2 LTR ERV1 -27 540 1 3 1147 814 267 42 14 chr15 73759575 73759801 -29735173 + MTE-int LTR MaLR 210 446 -1134 3 1147 1837 118 113 21 chr15 73762156 73762284 -29732690 + ORR1B2 LTR MaLR 2 151 -216 3 1147 468 0 0 0 chr15 73762284 73762336 -29732638 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 1147 396 0 0 0 chr15 73762336 73762379 -29732595 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1147 1837 118 113 21 chr15 73762379 73762577 -29732397 + ORR1B2 LTR MaLR 152 358 -9 3 1147 198 320 13 13 chr15 73762633 73762709 -29732265 - MIR SINE MIR -130 132 57 3 1147 283 344 32 32 chr15 73763121 73763277 -29731697 + MIRb SINE MIR 51 206 -62 3 1147 506 259 32 8 chr15 73764077 73764231 -29730743 - MER20 DNA MER1_type -55 164 5 3 1147 220 91 45 0 chr15 73764340 73764384 -29730590 + (TCC)n Simple_repeat Simple_repeat 2 47 0 3 1147 186 43 0 0 chr15 73764657 73764680 -29730294 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1147 829 237 0 79 chr15 73765628 73765843 -29729131 - B3A SINE B2 0 198 1 3 1147 535 209 0 20 chr15 73766041 73766296 -29728678 + (CA)n Simple_repeat Simple_repeat 1 249 0 3 1147 444 120 28 9 chr15 73766301 73766410 -29728564 + (CAGA)n Simple_repeat Simple_repeat 4 114 0 3 1147 307 246 43 0 chr15 73768045 73768114 -29726860 - MIRc SINE MIR -83 185 114 3 1147 721 108 73 16 chr15 73768554 73768677 -29726297 - B1_Mur4 SINE Alu -1 149 20 3 1147 277 256 60 3 chr15 73768803 73768901 -29726073 + MTEa LTR MaLR 279 379 0 3 1147 466 229 12 138 chr15 73769113 73769280 -29725694 + HAL1-2a_MD LINE L1 2358 2503 -521 3 1147 567 224 29 72 chr15 73769305 73769512 -29725462 + HAL1-2a_MD LINE L1 2345 2542 -482 3 1147 1713 291 93 10 chr15 73770110 73771090 -29723884 - L1MDa LINE L1 -2913 3624 2552 3 1147 207 0 0 0 chr15 73771097 73771120 -29723854 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1147 347 275 30 1 chr15 73771144 73771251 -29723723 - PB1D9 SINE Alu -9 111 1 3 1147 258 295 165 21 chr15 73771325 73771363 -29723611 - L1MDa LINE L1 -4125 2508 2469 3 1147 1220 54 0 0 chr15 73771363 73771511 -29723463 - B1_Mus1 SINE Alu 0 148 1 3 1147 258 295 165 21 chr15 73771511 73771763 -29723211 - L1MDa LINE L1 -4165 2468 2176 3 1147 719 261 19 0 chr15 73771941 73772102 -29722872 - RSINE1 SINE B4 0 165 2 3 1147 975 269 95 21 chr15 73772106 73772527 -29722447 - L1MDa LINE L1 -4600 2033 1582 3 1147 283 206 32 0 chr15 73772552 73772615 -29722359 + CT-rich Low_complexity Low_complexity 4 68 0 3 1147 337 295 112 29 chr15 73772616 73772822 -29722152 - L1MDa LINE L1 -5062 1571 1349 3 1147 675 278 148 35 chr15 73773414 73773697 -29721277 - Lx8 LINE L1 -55 7418 7104 3 1147 238 311 0 0 chr15 73774460 73774521 -29720453 - ID2 SINE ID -15 68 8 3 1147 636 14 0 0 chr15 73774704 73774777 -29720197 + (CA)n Simple_repeat Simple_repeat 2 74 0 3 1147 1458 160 0 13 chr15 73774959 73775187 -29719787 + URR1A DNA MER1_type 1 225 -1 3 1147 1148 75 7 0 chr15 73775311 73775458 -29719516 + B1_Mus1 SINE Alu 1 148 0 3 1147 225 0 0 0 chr15 73775458 73775483 -29719491 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1147 602 197 7 0 chr15 73776327 73776474 -29718500 + (CTCA)n Simple_repeat Simple_repeat 2 149 0 3 1147 251 325 0 0 chr15 73777215 73777292 -29717682 - L1MC3 LINE L1 -494 7291 7215 3 1147 554 299 106 75 chr15 73777479 73777507 -29717467 - L1MC3 LINE L1 -920 7075 7031 3 1147 1096 98 4 19 chr15 73777507 73777765 -29717209 + (TCCA)n Simple_repeat Simple_repeat 1 253 0 3 1147 554 305 109 61 chr15 73777765 73778455 -29716519 - L1MC3 LINE L1 -944 7051 6262 3 1147 690 291 141 4 chr15 73778964 73779219 -29715755 + B4 SINE B4 1 290 -2 3 1147 1252 262 168 53 chr15 73779226 73779787 -29715187 + RMER20B LTR ERVK 3 627 0 3 1147 460 378 0 0 chr15 73779797 73779977 -29714997 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1147 744 85 242 17 chr15 73781600 73781720 -29713254 + B1_Mus2 SINE Alu 1 147 0 3 1147 261 0 0 0 chr15 73783962 73783991 -29710983 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 3 1147 24 53 0 0 chr15 73783996 73784034 -29710940 + AT_rich Low_complexity Low_complexity 1 38 0 3 1147 1164 203 5 14 chr15 73784040 73784255 -29710719 - B3 SINE B2 -3 213 1 3 1147 1151 72 0 0 chr15 73784327 73784465 -29710509 + B1_Mm SINE Alu 2 139 -8 3 1147 279 146 0 0 chr15 73784479 73784534 -29710440 + (CAAAAA)n Simple_repeat Simple_repeat 2 56 0 3 1147 1182 258 28 11 chr15 73787698 73787980 -29706994 - B4 SINE B4 0 292 6 3 1147 686 274 47 65 chr15 73788607 73788822 -29706152 - B3 SINE B2 -1 215 5 3 1147 302 141 28 0 chr15 73789028 73789099 -29705875 + (TCTCTG)n Simple_repeat Simple_repeat 6 78 0 3 1147 387 0 0 0 chr15 73789302 73789345 -29705629 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1147 189 143 0 54 chr15 73790736 73790773 -29704201 - MIR SINE MIR -112 150 116 3 1147 391 241 16 41 chr15 73791782 73792120 -29702854 + (CATA)n Simple_repeat Simple_repeat 1 329 0 3 1147 339 279 16 24 chr15 73792138 73792359 -29702615 + (CATA)n Simple_repeat Simple_repeat 1 219 0 3 1147 444 333 0 0 chr15 73792314 73792452 -29702522 + (CA)n Simple_repeat Simple_repeat 2 139 0 3 1147 665 186 40 0 chr15 73793123 73793247 -29701727 - B3 SINE B2 -86 130 2 3 143 1792 171 21 6 chr15 73793247 73793582 -29701392 - ORR1C1 LTR MaLR -38 340 1 3 1148 1350 164 115 126 chr15 73794778 73795142 -29699832 - MTC LTR MaLR 0 421 62 3 1148 487 155 225 20 chr15 73795160 73795311 -29699663 - ORR1D1 LTR MaLR -192 182 1 3 1148 204 220 60 0 chr15 73795767 73795817 -29699157 - MIRb SINE MIR -94 174 122 3 1148 960 251 114 56 chr15 73796646 73797004 -29697970 - MTEa LTR MaLR 0 379 1 3 1148 208 324 38 44 chr15 73797270 73797424 -29697550 + MIRm SINE MIR 14 167 -109 3 1148 311 309 61 43 chr15 73797516 73797631 -29697343 + MIR SINE MIR 15 131 -131 3 1148 261 253 66 44 chr15 73798413 73798504 -29696470 - MLT1J1 LTR MaLR -299 145 53 3 1148 652 216 0 0 chr15 73798673 73798841 -29696133 + ID_B1 SINE B4 11 222 -2 4 1148 198 0 0 0 chr15 73798850 73798872 -29696102 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 4 1148 404 241 35 26 chr15 73798962 73799077 -29695897 + ORR1E LTR MaLR 1 116 -243 4 1148 632 258 0 52 chr15 73799552 73799724 -29695250 + RSINE1 SINE B4 3 165 0 4 1148 349 298 17 17 chr15 73800302 73800418 -29694556 + L1ME4a LINE L1 5723 5838 -286 4 1148 251 300 77 57 chr15 73801589 73801850 -29693124 - MTEb LTR MaLR -14 365 91 4 1148 919 147 94 17 chr15 73802734 73802914 -29692060 - B2_Mm2 SINE B2 -1 194 1 4 1148 1236 160 89 69 chr15 73802967 73803316 -29691658 - Lx9 LINE L1 -1 7643 7288 4 1148 240 344 78 26 chr15 73803911 73804081 -29690893 + MLT2C1 LTR ERVL 89 266 -131 4 1148 228 339 25 50 chr15 73804062 73804183 -29690791 + MLT2C1 LTR ERVL 427 544 -15 4 1148 527 66 0 13 chr15 73804957 73804997 -29689977 + (GA)n Simple_repeat Simple_repeat 1 40 0 4 1148 1106 113 11 0 chr15 73804997 73805174 -29689800 + (GGGAGA)n Simple_repeat Simple_repeat 2 180 0 4 1148 527 66 0 13 chr15 73805174 73805210 -29689764 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 1148 753 147 5 38 chr15 73806784 73806968 -29688006 + CT-rich Low_complexity Low_complexity 2 179 0 4 1148 463 262 0 11 chr15 73806986 73807160 -29687814 + CT-rich Low_complexity Low_complexity 3 174 0 4 1148 666 37 0 0 chr15 73808770 73808851 -29686123 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 4 1148 214 273 0 29 chr15 73808935 73809003 -29685971 - PB1D10 SINE Alu 0 117 52 4 1148 713 300 38 9 chr15 73811208 73811420 -29683554 - ID_B1 SINE B4 -6 218 1 4 1148 696 24 0 0 chr15 73812105 73812187 -29682787 + (TC)n Simple_repeat Simple_repeat 2 83 0 4 1148 205 282 21 96 chr15 73812463 73812557 -29682417 - L2c LINE L2 -258 3129 3043 4 1148 217 95 57 0 chr15 73813160 73813203 -29681771 - L2c LINE L2 -20 3367 3311 4 1148 409 312 110 80 chr15 73814064 73814391 -29680583 + ORR1E LTR MaLR 18 354 -5 4 1148 360 0 0 0 chr15 73815927 73815967 -29679007 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1148 372 211 0 0 chr15 73816067 73816219 -29678755 + (TG)n Simple_repeat Simple_repeat 2 153 0 4 1148 180 0 0 0 chr15 73816240 73816260 -29678714 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 1148 483 214 0 0 chr15 73816596 73816727 -29678247 + (CA)n Simple_repeat Simple_repeat 2 132 0 4 1148 200 182 0 0 chr15 73817136 73817169 -29677805 + (CTCA)n Simple_repeat Simple_repeat 2 34 0 4 1148 546 108 0 0 chr15 73817180 73817263 -29677711 + (CA)n Simple_repeat Simple_repeat 2 84 0 4 1148 479 250 40 29 chr15 73817498 73817671 -29677303 - HAL1-2a_MD LINE L1 -505 2519 2345 4 1148 183 80 0 0 chr15 73817694 73817719 -29677255 + (TGG)n Simple_repeat Simple_repeat 3 27 0 4 1148 216 260 23 105 chr15 73822126 73822212 -29672762 + L2a LINE L2 3320 3398 -28 4 1148 228 231 19 0 chr15 73824932 73824984 -29669990 + MIR SINE MIR 88 140 -68 4 1148 243 0 0 0 chr15 73829689 73829716 -29665258 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1148 292 234 0 21 chr15 73830736 73830832 -29664142 + CT-rich Low_complexity Low_complexity 2 95 0 4 1148 286 342 30 54 chr15 73831375 73831542 -29663432 + MLT1K LTR MaLR 150 312 -283 4 1148 217 316 53 0 chr15 73831659 73831754 -29663220 - MIRb SINE MIR -31 237 138 4 1148 234 62 0 0 chr15 73833061 73833093 -29661881 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 4 1148 1347 78 21 16 chr15 73833782 73833976 -29660998 - B2_Mm2 SINE B2 0 195 1 4 1148 513 115 0 0 chr15 73836210 73836288 -29658686 + (TCCC)n Simple_repeat Simple_repeat 3 80 0 4 1148 207 0 0 0 chr15 73836288 73836311 -29658663 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1148 429 20 0 0 chr15 73839993 73840043 -29654931 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 1148 401 224 0 12 chr15 73840644 73840730 -29654244 + B1F1 SINE Alu 33 117 -32 4 1148 436 225 234 21 chr15 73840885 73841026 -29653948 + B3 SINE B2 44 214 -2 4 1148 896 306 34 4 chr15 73841224 73841490 -29653484 + B4A SINE B4 12 285 -7 4 1148 470 200 38 53 chr15 73841511 73841643 -29653331 + RMER15 LTR ERVL 1 130 -445 4 1148 540 281 49 39 chr15 73841691 73841895 -29653079 + RMER15 LTR ERVL 357 562 -13 4 1148 399 336 14 0 chr15 73841910 73842050 -29652924 + HAL1-2a_MD LINE L1 2347 2488 -536 4 1148 351 275 274 22 chr15 73842203 73842608 -29652366 + L1MEc LINE L1 1097 1603 -5484 4 1148 267 298 51 26 chr15 73842650 73842767 -29652207 + PB1D9 SINE Alu 1 120 0 4 1148 3125 262 134 24 chr15 73842773 73842848 -29652126 + Lx7 LINE L1 6161 6228 -1468 4 1148 2116 107 25 0 chr15 73842848 73843166 -29651808 + ORR1A3 LTR MaLR 1 326 0 4 1148 3125 262 134 24 chr15 73843166 73843356 -29651618 + Lx7 LINE L1 6229 6417 -1279 4 1148 2099 153 25 3 chr15 73843356 73843724 -29651250 + ORR1C1 LTR MaLR 3 378 0 4 1148 3125 262 134 24 chr15 73843724 73844079 -29650895 + Lx7 LINE L1 6418 6800 -896 4 1148 3098 74 0 12 chr15 73844079 73844491 -29650483 - MTB_Mm LTR MaLR 0 407 1 4 1148 3125 262 134 24 chr15 73844491 73844938 -29650036 + Lx7 LINE L1 6801 7346 -350 4 1148 2083 72 42 3 chr15 73844943 73845250 -29649724 + ORR1A2 LTR MaLR 1 319 -8 4 1148 408 304 91 77 chr15 73845328 73845613 -29649361 + L1MEc LINE L1 1862 2150 -4937 4 1148 305 331 61 46 chr15 73845812 73846008 -29648966 + L1MC2 LINE L1 6000 6198 -146 4 1148 261 292 10 20 chr15 73846096 73846194 -29648780 + L1MEc LINE L1 3604 3700 -3634 4 1148 407 335 135 14 chr15 73846391 73846755 -29648219 + L1M4 LINE L1 2602 3007 -3139 4 1148 555 16 0 0 chr15 73846755 73846819 -29648155 + (TG)n Simple_repeat Simple_repeat 2 65 0 4 1148 407 315 134 1 chr15 73846819 73846995 -29647979 + L1M4 LINE L1 3008 3209 -2937 4 1148 549 241 15 29 chr15 73847003 73847140 -29647834 + ID_B1 SINE B4 90 224 0 4 1148 347 316 110 49 chr15 73847163 73847409 -29647565 + L1MEc LINE L1 4051 4311 -2695 4 1148 353 203 0 14 chr15 73847409 73847479 -29647495 + ID2 SINE ID 1 69 -14 4 1148 1097 52 28 11 chr15 73847483 73847659 -29647315 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 4 1148 237 125 35 18 chr15 73847659 73847716 -29647258 + GA-rich Low_complexity Low_complexity 3 60 0 4 1148 764 324 60 26 chr15 73847722 73848191 -29646783 + L1MEc LINE L1 4312 4796 -2210 4 1148 369 182 0 72 chr15 73848207 73848290 -29646684 - ID4 SINE ID -2 81 5 4 1148 349 260 10 20 chr15 73848298 73848396 -29646578 - PB1D10 SINE Alu 0 117 21 4 1148 198 0 0 0 chr15 73848431 73848453 -29646521 + (TGGGGG)n Simple_repeat Simple_repeat 2 23 0 4 1148 311 252 94 22 chr15 73848530 73848668 -29646306 + L1MEc LINE L1 4935 5082 -1924 4 1148 1148 215 180 19 chr15 73848872 73849233 -29645741 - MTD LTR MaLR 0 419 1 4 1148 269 346 16 8 chr15 73849284 73849412 -29645562 + L1MEc LINE L1 5423 5551 -1455 4 1148 303 140 0 0 chr15 73849416 73849466 -29645508 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1148 627 315 97 16 chr15 73849493 73849925 -29645049 + L1MEc LINE L1 5589 6055 -951 4 1148 432 0 0 0 chr15 73849971 73850019 -29644955 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1148 1030 209 115 2 chr15 73850059 73850336 -29644638 + MTEb LTR MaLR 77 379 0 4 1148 269 311 118 28 chr15 73850390 73850702 -29644272 + L1MEc LINE L1 6125 6466 -573 4 1148 567 290 87 76 chr15 73850702 73850822 -29644152 + ORR1E LTR MaLR 1 138 -221 4 1148 387 0 0 0 chr15 73850822 73850865 -29644109 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1148 567 290 87 76 chr15 73850865 73851099 -29643875 + ORR1E LTR MaLR 139 359 0 4 1148 266 343 115 27 chr15 73851099 73851124 -29643850 + L1MEc LINE L1 6467 6491 -548 4 1148 207 0 0 0 chr15 73851460 73851483 -29643491 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1148 405 0 0 0 chr15 73851483 73851527 -29643447 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 1148 755 50 0 10 chr15 73851527 73851628 -29643346 + (CAG)n Simple_repeat Simple_repeat 2 101 0 4 1148 180 0 0 0 chr15 73852135 73852155 -29642819 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 1148 401 232 0 21 chr15 73852738 73852835 -29642139 - PB1D10 SINE Alu -5 112 18 4 1148 228 263 0 0 chr15 73852918 73852994 -29641980 + (TG)n Simple_repeat Simple_repeat 2 77 0 4 1148 185 257 69 28 chr15 73853495 73853567 -29641407 - MIRb SINE MIR -21 247 173 4 1148 242 319 10 20 chr15 73854523 73854624 -29640350 + ID4 SINE ID 3 101 -51 4 1148 342 175 83 19 chr15 73854637 73854794 -29640180 + (TAGA)n Simple_repeat Simple_repeat 3 169 0 4 1148 794 144 0 0 chr15 73854831 73854963 -29640011 + URR1B DNA MER1_type 94 225 0 4 1148 577 172 26 7 chr15 73854964 73855116 -29639858 + (TAGA)n Simple_repeat Simple_repeat 3 157 0 4 1148 683 147 17 6 chr15 73855145 73855323 -29639651 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 4 1148 330 67 0 0 chr15 73857608 73857653 -29637321 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 4 1148 210 265 0 0 chr15 73859754 73859822 -29635152 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 4 1148 398 204 9 0 chr15 73859847 73859955 -29635019 + (TTCA)n Simple_repeat Simple_repeat 2 110 0 4 1148 306 143 39 0 chr15 73859984 73860061 -29634913 + (TCCA)n Simple_repeat Simple_repeat 1 80 0 4 1148 381 287 9 18 chr15 73860314 73860424 -29634550 + Lx7 LINE L1 5643 5751 -1945 4 1148 1276 237 97 9 chr15 73860424 73860764 -29634210 - MTE2a LTR MaLR -9 370 1 4 1148 824 291 34 34 chr15 73860811 73861074 -29633900 + B4A SINE B4 14 276 -16 4 1148 219 139 0 0 chr15 73861118 73861154 -29633820 + (CATA)n Simple_repeat Simple_repeat 3 38 0 4 1148 430 299 78 6 chr15 73861156 73861359 -29633615 + L1MA5A LINE L1 5818 6036 -264 4 1148 285 301 67 93 chr15 73862473 73862667 -29632307 + MLT1D LTR MaLR 1 189 -316 4 1148 245 53 0 50 chr15 73862796 73862836 -29632138 + (GGAGAA)n Simple_repeat Simple_repeat 2 39 0 4 1148 1099 117 0 11 chr15 73862836 73863018 -29631956 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 1148 2786 136 22 45 chr15 73863139 73863678 -29631296 + RLTR11A2 LTR ERVK 1 527 0 4 1148 357 299 53 115 chr15 73864366 73864574 -29630400 - HAL1 LINE L1 -967 1540 1346 4 1148 535 280 136 13 chr15 73864676 73864911 -29630063 - MLT1B LTR MaLR -121 269 6 4 1148 262 164 18 0 chr15 73865699 73865754 -29629220 + L1MC2 LINE L1 6278 6333 -11 4 1148 4514 155 87 18 chr15 73868802 73869651 -29625323 - RMER13B LTR ERVK 0 908 1 4 1148 1024 144 52 0 chr15 73872235 73872408 -29622566 - URR1B DNA MER1_type -4 221 40 4 1148 422 269 85 34 chr15 73873635 73873812 -29621162 - HAL1-2a_MD LINE L1 -509 2515 2330 4 1148 374 304 66 36 chr15 73873841 73874008 -29620966 - HAL1-2a_MD LINE L1 -509 2515 2344 4 1148 263 321 9 18 chr15 73874084 73874307 -29620667 + (ATGGTG)n Simple_repeat Simple_repeat 1 220 0 4 1148 626 286 16 11 chr15 73876637 73876828 -29618146 - B3A SINE B2 -3 195 4 4 1148 312 347 149 51 chr15 73876837 73877040 -29617934 - L1M4 LINE L1 -941 5205 4979 4 1148 1004 122 0 33 chr15 73877040 73877192 -29617782 - B1_Mus1 SINE Alu -1 147 1 5 1148 312 347 149 51 chr15 73877192 73877264 -29617710 - L1M4 LINE L1 -1168 4978 4903 4 1148 254 279 48 122 chr15 73878208 73878355 -29616619 + MER53 DNA hAT 39 174 -19 5 1148 1292 114 26 44 chr15 73878945 73879174 -29615800 - URR1A DNA MER1_type -1 225 1 5 1148 225 83 0 0 chr15 73884107 73884143 -29610831 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 5 1148 180 0 0 0 chr15 73884238 73884258 -29610716 + (TTCC)n Simple_repeat Simple_repeat 4 23 0 5 1148 186 133 0 0 chr15 73887270 73887300 -29607674 + (AGGGGG)n Simple_repeat Simple_repeat 6 35 0 5 1148 531 107 10 102 chr15 73887350 73887547 -29607427 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 5 1148 2415 186 112 13 chr15 73890574 73891098 -29603876 + Lx9 LINE L1 6985 7552 -92 5 1148 575 51 13 0 chr15 73891098 73891177 -29603797 + (GGAA)n Simple_repeat Simple_repeat 3 82 0 5 1148 2415 186 112 13 chr15 73891177 73891252 -29603722 + Lx9 LINE L1 7553 7643 -1 5 1148 325 299 17 8 chr15 73891840 73891958 -29603016 - L1M5 LINE L1 -1083 5063 4945 5 1148 329 365 127 17 chr15 73892141 73892503 -29602471 - L1MC3 LINE L1 -490 7295 6894 5 1148 385 320 33 0 chr15 73892564 73892717 -29602257 - L1MC3 LINE L1 -961 6824 6667 5 1148 268 346 132 33 chr15 73893000 73893212 -29601762 + MLT1E LTR MaLR 398 630 -23 5 1148 383 0 0 21 chr15 73893326 73893374 -29601600 + (TTA)n Simple_repeat Simple_repeat 2 48 0 5 1148 602 247 12 58 chr15 73893375 73893547 -29601427 - RSINE1 SINE B4 0 165 2 5 1148 180 112 43 70 chr15 73894845 73894960 -29600014 + (TATATG)n Simple_repeat Simple_repeat 5 116 0 5 1148 1401 217 132 9 chr15 73894972 73895338 -29599636 - MT2A LTR ERVL -85 448 1 5 1148 231 261 77 0 chr15 73895338 73895398 -29599576 - MLT1B LTR MaLR -323 67 3 5 1148 1235 89 6 0 chr15 73899019 73899198 -29595776 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 5 1148 2604 157 21 19 chr15 73899234 73899720 -29595254 - Lx LINE L1 -67 6587 6101 5 1148 348 265 175 6 chr15 73900228 73900347 -29594627 - L1MCa LINE L1 -5153 1355 1209 5 1148 478 231 134 17 chr15 73900347 73900466 -29594508 - B1F1 SINE Alu -16 133 1 5 1148 348 265 175 6 chr15 73900466 73900517 -29594457 - L1MCa LINE L1 -5300 1208 1157 5 1148 329 280 95 49 chr15 73900552 73900823 -29594151 - L1MCa LINE L1 -5331 1177 887 5 1148 2531 151 37 2 chr15 73900823 73901228 -29593746 + MTC LTR MaLR 1 419 -2 5 1148 329 280 95 49 chr15 73901228 73901283 -29593691 - L1MCa LINE L1 -5622 886 836 5 1148 252 200 0 20 chr15 73902181 73902232 -29592742 - MIR3 SINE MIR -50 158 109 5 1148 183 293 0 0 chr15 73903662 73903703 -29591271 - MIR SINE MIR -115 147 107 5 1148 273 291 11 85 chr15 73903965 73904059 -29590915 + MIRc SINE MIR 113 199 -69 5 1148 883 338 57 21 chr15 73904616 73904948 -29590026 - MER2 DNA MER2_type 0 345 2 5 1148 414 389 18 0 chr15 73905533 73905754 -29589220 - L2c LINE L2 -48 3339 3115 5 1148 241 365 43 0 chr15 73907312 73907427 -29587547 + MIRb SINE MIR 50 169 -99 5 1148 226 361 88 16 chr15 73908271 73908465 -29586509 + L2 LINE L2 2685 2892 -527 5 1148 198 0 0 0 chr15 73908561 73908583 -29586391 + (TCTG)n Simple_repeat Simple_repeat 2 23 0 5 1148 184 232 143 0 chr15 73908872 73908928 -29586046 - L2a LINE L2 -76 3350 3287 5 1148 189 0 0 0 chr15 73909027 73909048 -29585926 + (CTG)n Simple_repeat Simple_repeat 1 21 0 5 1148 970 273 6 92 chr15 73909501 73909816 -29585158 - B4A SINE B4 -4 288 1 5 1148 222 118 0 0 chr15 73910401 73910435 -29584539 + (T)n Simple_repeat Simple_repeat 1 34 0 5 1148 477 307 24 0 chr15 73912214 73912341 -29582633 + B3A SINE B2 53 182 -16 5 1148 536 229 0 0 chr15 73912330 73912426 -29582548 + B1_Mur1 SINE Alu 49 144 -5 5 1148 21 57 0 0 chr15 73912481 73912516 -29582458 + AT_rich Low_complexity Low_complexity 1 35 0 5 1148 2973 252 45 42 chr15 73913100 73913619 -29581355 + Lx9 LINE L1 4896 5414 -433 5 1148 180 0 0 0 chr15 73913619 73913639 -29581335 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 5 1148 2973 274 101 34 chr15 73913639 73915569 -29579405 + Lx9 LINE L1 5415 7515 -129 5 1148 264 100 0 0 chr15 73915569 73915609 -29579365 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 5 1148 2451 261 114 18 chr15 73915609 73915669 -29579305 + Lx9 LINE L1 7516 7587 -57 5 1148 381 277 12 0 chr15 73915669 73915752 -29579222 - RSINE1 SINE B4 -37 128 45 5 1148 366 292 88 0 chr15 73915776 73915889 -29579085 - PB1 SINE Alu -2 125 3 5 1148 219 314 63 71 chr15 73916589 73916716 -29578258 + L2c LINE L2 3258 3383 -4 5 1148 297 280 64 83 chr15 73917744 73917853 -29577121 - MLT1A LTR MaLR -158 216 110 5 1148 253 215 30 30 chr15 73918373 73918440 -29576534 + MLT1J2 LTR MaLR 80 146 -302 5 1148 188 283 93 42 chr15 73918773 73918891 -29576083 + L2 LINE L2 407 530 -2889 5 1148 1736 177 85 9 chr15 73919240 73919570 -29575404 - MTB_Mm LTR MaLR -52 355 1 5 1148 825 226 16 47 chr15 73919753 73919943 -29575031 - B3A SINE B2 -14 184 1 5 1148 1025 270 95 57 chr15 73919951 73920552 -29574422 - L1MB7 LINE L1 -1 6183 5560 5 1148 487 294 7 75 chr15 73921000 73921147 -29573827 - B4A SINE B4 0 292 156 5 1148 803 260 30 21 chr15 73921326 73921660 -29573314 - L1MB7 LINE L1 -709 5455 5115 5 1148 409 205 6 0 chr15 73921662 73921738 -29573236 - L1M5 LINE L1 -2228 5767 5685 5 1148 261 0 0 0 chr15 73921738 73921767 -29573207 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 1148 246 282 93 0 chr15 73921767 73921862 -29573112 - L1M5 LINE L1 -2311 5684 5561 5 1148 820 304 123 7 chr15 73921933 73922354 -29572620 - Lx8 LINE L1 -33 7440 6971 5 1148 310 348 53 67 chr15 73922514 73922945 -29572029 - L1M5 LINE L1 -915 5231 4807 5 1148 468 200 0 0 chr15 73923230 73923350 -29571624 + (TG)n Simple_repeat Simple_repeat 1 120 0 5 1148 707 284 39 0 chr15 73923356 73923511 -29571463 - RSINE1 SINE B4 -2 163 3 5 1148 240 35 0 0 chr15 73923583 73923612 -29571362 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1148 183 170 0 0 chr15 73923757 73923804 -29571170 + A-rich Low_complexity Low_complexity 2 48 0 5 1148 365 170 0 11 chr15 73924131 73924220 -29570754 + CT-rich Low_complexity Low_complexity 2 89 0 5 1149 253 288 124 45 chr15 73925198 73925219 -29569755 + YREP_Mm Unknown Unknown 145 232 -1580 5 1149 567 235 16 16 chr15 73925219 73925340 -29569634 - ID_B1 SINE B4 -7 217 97 5 1149 333 323 59 37 chr15 73925340 73925354 -29569620 - B1_Mur4 SINE Alu -7 143 6 5 1149 253 288 124 45 chr15 73925354 73925376 -29569598 + YREP_Mm Unknown Unknown 233 336 -1476 5 1149 425 379 58 14 chr15 73925553 73925847 -29569127 - L1MEc LINE L1 -2659 3660 3354 5 1149 671 54 0 11 chr15 73925902 73925995 -29568979 + (TTTC)n Simple_repeat Simple_repeat 3 94 0 5 1149 571 350 157 45 chr15 73926070 73926975 -29567999 - L1MEc LINE L1 -3945 2455 1450 5 1149 479 264 26 63 chr15 73927001 73927191 -29567783 - HAL1-2a_MD LINE L1 -502 2522 2340 5 1149 2155 87 30 58 chr15 73928659 73928987 -29565987 - ORR1A2 LTR MaLR -8 319 1 5 1149 1470 196 29 136 chr15 73930281 73930701 -29564273 - MTEb LTR MaLR -4 375 1 5 1149 219 242 42 55 chr15 73932198 73932296 -29562678 - MIRb SINE MIR -1 261 161 5 1149 482 338 6 25 chr15 73933803 73933964 -29561010 + RSINE1 SINE B4 2 159 -6 5 1149 263 175 0 17 chr15 73933980 73934038 -29560936 + GA-rich Low_complexity Low_complexity 3 59 0 5 1149 895 271 60 54 chr15 73934197 73934529 -29560445 - MTEa LTR MaLR -7 372 39 5 1149 2656 133 2 37 chr15 73934543 73934929 -29560045 - MTC LTR MaLR -8 413 41 5 1149 1318 97 90 24 chr15 73934929 73935141 -29559833 - URR1A DNA MER1_type 0 226 1 5 1149 2656 133 2 37 chr15 73935141 73935182 -29559792 - MTC LTR MaLR -381 40 1 5 1149 440 253 69 38 chr15 73935180 73935340 -29559634 + RMER30 DNA MER1_type 2 166 -36 5 1149 670 268 61 10 chr15 73935401 73935597 -29559377 - B3 SINE B2 0 216 11 5 1149 622 207 0 26 chr15 73935773 73935867 -29559107 + G-rich Low_complexity Low_complexity 64 157 0 5 1149 909 118 0 0 chr15 73935867 73936045 -29558929 + (GGA)n Simple_repeat Simple_repeat 3 180 0 5 1149 622 207 0 26 chr15 73936045 73936064 -29558910 + G-rich Low_complexity Low_complexity 158 174 0 5 1149 759 142 0 0 chr15 73936083 73936259 -29558715 + (CAG)n Simple_repeat Simple_repeat 2 177 0 5 1149 696 156 0 0 chr15 73936228 73936408 -29558566 + GA-rich Low_complexity Low_complexity 1 180 0 5 1149 284 384 23 39 chr15 73937103 73937233 -29557741 - MTEa LTR MaLR -251 128 1 5 1149 312 227 259 23 chr15 73937233 73937362 -29557612 - MER31A LTR ERV1 -325 160 1 5 1149 333 0 0 0 chr15 73937424 73937461 -29557513 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1149 734 306 64 52 chr15 73937905 73938250 -29556724 + MLT1B LTR MaLR 8 356 -34 5 1149 1062 89 0 0 chr15 73938268 73938437 -29556537 + (GA)n Simple_repeat Simple_repeat 1 169 0 5 1149 2006 150 3 50 chr15 73939552 73939895 -29555079 - ORR1A2 LTR MaLR 0 327 1 5 1149 434 75 15 0 chr15 73940641 73940708 -29554266 + (CA)n Simple_repeat Simple_repeat 2 69 0 5 1149 202 234 15 45 chr15 73941298 73941365 -29553609 + MIR SINE MIR 65 129 -133 5 1149 309 305 19 19 chr15 73943421 73943528 -29551446 + HAL1-2a_MD LINE L1 2406 2512 -512 5 1149 373 322 45 26 chr15 73943643 73943799 -29551175 + HAL1-2a_MD LINE L1 2349 2507 -517 5 1149 302 317 12 35 chr15 73943808 73943981 -29550993 + (CACCAT)n Simple_repeat Simple_repeat 2 170 0 5 1149 224 262 33 15 chr15 73944522 73944641 -29550333 + MIR SINE MIR 5 125 -143 5 1149 180 0 0 0 chr15 73949451 73949471 -29545503 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1149 556 279 82 11 chr15 73949471 73949722 -29545252 - L1MEf LINE L1 -5019 1365 1060 5 1149 579 276 66 11 chr15 73949740 73949923 -29545051 + L1MA5 LINE L1 5696 5888 -412 5 1149 325 320 84 39 chr15 73951246 73951425 -29543549 - L1ME2 LINE L1 -164 6000 5814 5 1149 712 253 49 6 chr15 73951683 73951761 -29543213 + ID SINE ID 1 86 -138 5 1149 220 292 25 66 chr15 73951761 73951882 -29543092 + PB1D10 SINE Alu 1 116 -1 5 1149 1025 256 109 37 chr15 73953412 73953761 -29541213 + MTE2b LTR MaLR 6 379 0 5 1149 340 307 17 42 chr15 73953890 73954009 -29540965 + PB1D10 SINE Alu 1 116 -1 5 1149 991 184 45 0 chr15 73954057 73954258 -29540716 + B3 SINE B2 2 211 -5 5 1149 378 0 0 0 chr15 73954643 73954685 -29540289 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1149 331 308 45 15 chr15 73955576 73955708 -29539266 - MLT1D LTR MaLR -350 155 20 6 1149 207 204 0 0 chr15 73955943 73955987 -29538987 + A-rich Low_complexity Low_complexity 1 44 0 6 1149 360 0 0 0 chr15 73956496 73956536 -29538438 + (GA)n Simple_repeat Simple_repeat 2 41 0 6 1149 517 211 93 204 chr15 73956876 73957102 -29537872 + Lx7 LINE L1 6689 6889 -807 6 1149 360 0 0 0 chr15 73957102 73957142 -29537832 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 1149 420 37 0 0 chr15 73959928 73959982 -29534992 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1149 285 289 55 27 chr15 73959991 73960101 -29534873 - MLT1K LTR MaLR -88 522 411 6 1149 272 286 10 0 chr15 73960651 73960731 -29534243 + B1F SINE Alu 34 118 -2 6 1149 490 283 0 38 chr15 73963377 73963535 -29531439 + RSINE1 SINE B4 2 153 -12 6 1149 491 295 0 0 chr15 73963923 73964045 -29530929 + ID_B1 SINE B4 97 218 -6 6 1149 446 346 89 27 chr15 73964276 73964614 -29530360 + MLT1A0 LTR MaLR 7 365 0 6 1149 265 242 21 0 chr15 73964953 73965051 -29529923 + L1M5 LINE L1 4199 4298 -1848 6 1149 271 314 19 19 chr15 73965243 73965347 -29529627 + PB1D10 SINE Alu 1 104 -13 6 1149 948 246 73 117 chr15 73965347 73965742 -29529232 - MTE2a LTR MaLR -1 378 1 6 1149 1004 263 91 47 chr15 73965811 73966194 -29528780 + MTD LTR MaLR 20 419 0 6 1149 293 332 60 15 chr15 73966267 73966466 -29528508 + L1M5 LINE L1 4458 4665 -1481 6 1149 326 331 73 112 chr15 73967570 73967981 -29526993 - MLT1A1 LTR MaLR -13 395 1 6 1149 356 345 32 102 chr15 73968406 73968719 -29526255 + L1M5 LINE L1 4798 5088 -1058 6 1149 1173 277 25 31 chr15 73969094 73969452 -29525522 - Lx8 LINE L1 -837 6636 6281 6 1149 4761 142 50 28 chr15 73969452 73970341 -29524633 - RMER13B LTR ERVK 0 908 1 6 1149 989 74 0 0 chr15 73970350 73970485 -29524489 + B1_Mm SINE Alu 13 147 0 6 1149 1940 230 53 40 chr15 73970806 73971336 -29523638 - RCHARR1 DNA MER1_type -435 539 3 6 1149 271 214 0 0 chr15 73971940 73971996 -29522978 + LTR50 LTR ERVL 25 80 -715 6 1149 521 305 93 45 chr15 73972367 73972765 -29522209 + L1MD2 LINE L1 4301 4717 -1429 6 1149 443 134 12 0 chr15 73972772 73972854 -29522120 + (GGA)n Simple_repeat Simple_repeat 3 85 0 6 1149 753 308 88 72 chr15 73972914 73973945 -29521029 + L1MD2 LINE L1 4981 6017 -342 6 1149 477 336 62 74 chr15 73974475 73974784 -29520190 + MTEa LTR MaLR 1 305 -74 6 1149 229 346 0 12 chr15 73975343 73975425 -29519549 + (CA)n Simple_repeat Simple_repeat 1 81 0 6 1149 1225 288 48 12 chr15 73977580 73977917 -29517057 + MTEa LTR MaLR 6 354 -25 6 1149 1006 223 10 10 chr15 73977962 73978157 -29516817 + B3 SINE B2 1 195 -21 6 1149 188 34 0 33 chr15 73978158 73978188 -29516786 + (TAAAA)n Simple_repeat Simple_repeat 4 32 0 6 1149 360 0 0 0 chr15 73978424 73978464 -29516510 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1149 247 357 73 47 chr15 73978583 73978774 -29516200 - MIRb SINE MIR -10 258 63 6 1149 252 0 0 0 chr15 73980309 73980337 -29514637 + (TGG)n Simple_repeat Simple_repeat 3 30 0 6 1149 598 294 23 0 chr15 73983066 73983243 -29511731 - B3A SINE B2 -8 190 10 6 1149 353 324 65 53 chr15 73983817 73984157 -29510817 + L1MC LINE L1 2882 3233 -2913 6 1149 856 215 80 0 chr15 73984162 73984362 -29510612 + B3 SINE B2 1 216 0 6 1149 1106 121 16 32 chr15 73984388 73984576 -29510398 - B2_Mm2 SINE B2 -10 185 1 6 1149 22 0 0 0 chr15 73985324 73985346 -29509628 + AT_rich Low_complexity Low_complexity 1 22 0 6 1149 243 0 0 0 chr15 73985520 73985547 -29509427 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1149 192 77 0 0 chr15 73988937 73988963 -29506011 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1149 1141 141 131 0 chr15 73990300 73990499 -29504475 - URR1B DNA MER1_type 0 225 1 6 1149 271 207 0 17 chr15 73990626 73990685 -29504289 + L5 LINE RTE 2037 2094 -171 6 1149 248 336 117 8 chr15 73992109 73992229 -29502745 - MER20 DNA MER1_type -82 137 5 6 1149 21 0 0 0 chr15 73992911 73992932 -29502042 + AT_rich Low_complexity Low_complexity 1 21 0 6 1149 457 147 10 10 chr15 73994970 73995066 -29499908 + (TG)n Simple_repeat Simple_repeat 2 97 0 6 1149 423 0 0 0 chr15 73995328 73995375 -29499599 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1149 353 293 78 20 chr15 73995609 73995762 -29499212 - MLT1B LTR MaLR -17 373 212 6 1149 186 304 18 18 chr15 73996900 73996957 -29498017 - MIR SINE MIR -150 112 56 6 1149 279 114 0 0 chr15 73998618 73998662 -29496312 + (TCCC)n Simple_repeat Simple_repeat 3 46 0 6 1149 486 0 0 0 chr15 74000652 74000706 -29494268 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1149 276 286 14 0 chr15 74000708 74000778 -29494196 + G-rich Low_complexity Low_complexity 4 74 0 2 1149 496 321 0 7 chr15 74001568 74001709 -29493265 + ID_B1 SINE B4 84 223 -1 3 1149 513 231 20 88 chr15 74002400 74002547 -29492427 + B1F SINE Alu 12 148 -1 4 1149 333 0 0 0 chr15 74003071 74003108 -29491866 + (CCCCCA)n Simple_repeat Simple_repeat 5 41 0 5 1149 279 0 0 0 chr15 74003697 74003728 -29491246 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1149 244 294 58 10 chr15 74004335 74004438 -29490536 + RMER15 LTR ERVL 422 529 -46 7 1149 191 36 36 0 chr15 74004990 74005018 -29489956 + (CCCCCA)n Simple_repeat Simple_repeat 1 29 0 8 1149 434 303 97 36 chr15 74006778 74006973 -29488001 + L1MEg LINE L1 563 769 -5315 9 1149 441 0 0 0 chr15 74007125 74007174 -29487800 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1149 458 242 54 8 chr15 74007549 74007678 -29487296 + L1MEb LINE L1 34 168 -5926 1 1149 273 119 0 0 chr15 74007902 74007944 -29487030 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1149 839 160 7 14 chr15 74008148 74008294 -29486680 + B1_Mus2 SINE Alu 2 146 -1 1 1149 2876 68 12 30 chr15 74008514 74008921 -29486053 - MTB LTR MaLR 0 400 1 1 1149 352 297 99 20 chr15 74009090 74009241 -29485733 + RSINE1 SINE B4 3 165 0 1 1149 307 308 127 19 chr15 74009395 74009600 -29485374 + L1MEb LINE L1 1367 1593 -4607 1 1149 441 0 0 0 chr15 74009692 74009741 -29485233 + (A)n Simple_repeat Simple_repeat 1 49 0 1 1149 742 256 188 9 chr15 74010409 74010729 -29484245 - MTE2a LTR MaLR -2 377 1 1 1149 350 267 16 24 chr15 74010979 74011102 -29483872 + L1MEc LINE L1 682 803 -5597 1 1149 441 0 0 0 chr15 74011117 74011166 -29483808 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1149 236 273 30 0 chr15 74011450 74011516 -29483458 + (TATATG)n Simple_repeat Simple_repeat 6 73 0 2 1149 309 183 0 0 chr15 74011531 74011591 -29483383 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 1149 539 290 6 74 chr15 74011591 74011682 -29483292 - RSINE1 SINE B4 0 165 79 2 1149 1222 153 0 31 chr15 74011682 74011911 -29483063 + URR1B DNA MER1_type 4 225 0 2 1149 539 290 6 74 chr15 74011911 74011994 -29482980 - RSINE1 SINE B4 -87 78 3 2 1149 298 342 39 2 chr15 74012128 74012320 -29482654 + L1MEc LINE L1 2485 2685 -3634 1 1149 1146 174 38 10 chr15 74012584 74012793 -29482181 - URR1A DNA MER1_type 0 226 12 2 1149 279 301 24 12 chr15 74012962 74013046 -29481928 - B4 SINE B4 -13 279 195 2 1149 336 231 88 0 chr15 74013141 74013232 -29481742 + MLT1A1 LTR MaLR 308 406 -2 2 1149 612 350 65 4 chr15 74013236 74013800 -29481174 + L1MEc LINE L1 2949 3553 -2766 1 1149 468 0 0 0 chr15 74014228 74014280 -29480694 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1149 778 306 41 30 chr15 74014282 74014551 -29480423 - B4A SINE B4 -20 272 1 2 1149 258 284 0 43 chr15 74014577 74014647 -29480327 - tRNA-Ala-GCA tRNA tRNA -8 67 1 2 1149 615 249 18 12 chr15 74014796 74014963 -29480011 + MTD LTR MaLR 1 168 -251 3 1149 1810 265 34 16 chr15 74015015 74015522 -29479452 + RMER20A LTR ERVK 1 516 0 3 1149 695 178 86 33 chr15 74015523 74015674 -29479300 + MTD LTR MaLR 247 405 -14 3 1149 2184 93 13 0 chr15 74016249 74016561 -29478413 - ORR1A2 LTR MaLR -7 320 5 3 1149 329 308 54 0 chr15 74016916 74017046 -29477928 + MIR SINE MIR 17 153 -109 3 1149 247 378 0 0 chr15 74018114 74018286 -29476688 + (GGATG)n Simple_repeat Simple_repeat 1 172 0 3 1149 271 202 22 0 chr15 74019432 74019521 -29475453 + (TAGA)n Simple_repeat Simple_repeat 2 92 0 3 1149 383 226 75 12 chr15 74019545 74019706 -29475268 + (TAGA)n Simple_repeat Simple_repeat 3 173 0 3 1149 27 0 0 0 chr15 74019730 74019757 -29475217 + AT_rich Low_complexity Low_complexity 1 27 0 3 1149 2310 84 12 0 chr15 74019849 74020171 -29474803 - ORR1A2 LTR MaLR -1 326 1 3 1149 217 192 24 40 chr15 74020171 74020296 -29474678 + (TAGA)n Simple_repeat Simple_repeat 3 125 0 3 1149 771 169 0 86 chr15 74020437 74020599 -29474375 + B1_Mur2 SINE Alu 1 148 -1 3 1149 260 314 37 19 chr15 74020793 74020900 -29474074 - LTR16B LTR ERVL -343 120 12 4 1149 648 83 0 0 chr15 74021004 74021100 -29473874 + (TG)n Simple_repeat Simple_repeat 2 97 0 4 1149 833 265 60 34 chr15 74021953 74022222 -29472752 + B4 SINE B4 3 278 -14 4 1149 207 278 186 17 chr15 74022424 74022596 -29472378 + L2 LINE L2 1901 2101 -1318 4 1149 233 393 37 37 chr15 74022731 74022974 -29472000 + L2 LINE L2 2365 2607 -812 4 1149 421 204 12 18 chr15 74023097 74023267 -29471707 + CT-rich Low_complexity Low_complexity 2 170 0 4 1149 329 267 33 16 chr15 74023330 74023452 -29471522 + CT-rich Low_complexity Low_complexity 2 125 0 4 1149 248 129 43 5 chr15 74026027 74026094 -29468880 + PB1 SINE Alu 74 147 -3 4 1149 487 262 25 0 chr15 74026105 74026227 -29468747 + RSINE1 SINE B4 1 125 -40 4 1149 285 118 0 0 chr15 74026227 74026278 -29468696 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 1149 396 0 0 0 chr15 74026654 74026698 -29468276 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1149 440 77 15 0 chr15 74026698 74026763 -29468211 + (GA)n Simple_repeat Simple_repeat 1 66 0 4 1149 201 281 130 40 chr15 74029096 74029196 -29465778 - L3 LINE CR1 -211 4278 4170 5 1149 546 228 244 9 chr15 74031810 74032023 -29462951 + B4 SINE B4 26 288 -4 5 1149 315 0 0 0 chr15 74032036 74032071 -29462903 + (GA)n Simple_repeat Simple_repeat 1 35 0 5 1149 302 286 106 50 chr15 74032071 74032270 -29462704 + HAL1-3A_ME LINE L1 1996 2205 -653 5 1149 531 112 0 0 chr15 74032270 74032350 -29462624 + (GAAA)n Simple_repeat Simple_repeat 4 83 0 5 1149 450 0 0 0 chr15 74032478 74032528 -29462446 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1149 251 381 80 0 chr15 74033178 74033354 -29461620 + MER74B LTR ERVL 281 470 -152 5 1149 595 187 14 14 chr15 74033451 74033592 -29461382 + CT-rich Low_complexity Low_complexity 2 142 0 5 1149 1142 48 14 0 chr15 74033594 74033739 -29461235 - B1_Mus1 SINE Alu 0 148 2 5 1149 231 281 0 0 chr15 74035862 74035919 -29459055 - MER53 DNA hAT 0 193 137 5 1149 336 102 0 0 chr15 74036944 74036993 -29457981 + (CTG)n Simple_repeat Simple_repeat 2 50 0 6 1149 208 262 45 27 chr15 74037943 74038053 -29456921 + (TCCA)n Simple_repeat Simple_repeat 2 113 0 6 1149 378 214 23 23 chr15 74038065 74038242 -29456732 + (TCCA)n Simple_repeat Simple_repeat 4 180 0 6 1149 3312 40 0 0 chr15 74038464 74038860 -29456114 + MTA_Mm LTR MaLR 1 396 0 6 1149 312 271 116 55 chr15 74039504 74039668 -29455306 - MLT1C LTR MaLR -274 193 20 6 1149 839 157 140 6 chr15 74040765 74041041 -29453933 + RMER17B LTR ERVK 16 439 -519 6 1149 1800 139 19 69 chr15 74042484 74042916 -29452058 - RMER17C LTR ERVK 0 410 1 6 1149 1698 177 48 97 chr15 74043229 74043316 -29451658 - RMER10A LTR ERVL 0 442 372 6 1149 2857 56 43 12 chr15 74043316 74043715 -29451259 - RLTR10A LTR ERVK 0 411 1 6 1149 1698 177 48 97 chr15 74043715 74044090 -29450884 - RMER10A LTR ERVL -71 371 3 6 1149 369 0 0 0 chr15 74044203 74044244 -29450730 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1149 426 255 83 19 chr15 74045296 74045452 -29449522 - MIRb SINE MIR -63 205 40 6 1149 207 57 86 0 chr15 74046926 74046961 -29448013 + (GGAAA)n Simple_repeat Simple_repeat 3 40 0 7 1149 559 312 41 16 chr15 74047409 74047653 -29447321 + MLT1A0 LTR MaLR 74 323 -42 7 1149 432 0 0 0 chr15 74049482 74049530 -29445444 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1149 221 259 74 0 chr15 74049873 74049927 -29445047 + ID4 SINE ID 2 59 -24 7 1149 185 286 36 0 chr15 74050159 74050215 -29444759 + MIRm SINE MIR 117 174 -102 7 1149 211 205 0 0 chr15 74050907 74050946 -29444028 + (CACCAT)n Simple_repeat Simple_repeat 2 40 0 7 1149 319 268 139 83 chr15 74053655 74053871 -29441103 - MLT1B LTR MaLR -161 229 2 7 1149 259 278 144 31 chr15 74055065 74055225 -29439749 + MLT1E LTR MaLR 469 646 -7 7 1150 187 167 119 0 chr15 74058114 74058156 -29436818 + MIR SINE MIR 123 169 -93 7 1150 312 234 137 11 chr15 74060039 74060134 -29434840 - L1MA6 LINE L1 -568 5729 5623 7 1150 1676 263 44 22 chr15 74060134 74060682 -29434292 + L1MA6 LINE L1 5741 6300 0 7 1150 360 0 0 0 chr15 74062234 74062274 -29432700 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 1150 880 271 169 50 chr15 74062500 74063368 -29431606 + L1MEc LINE L1 147 1118 -5282 8 1150 1146 66 0 0 chr15 74063564 74063716 -29431258 + (CA)n Simple_repeat Simple_repeat 2 153 0 8 1150 278 269 128 45 chr15 74063721 74063877 -29431097 + L1MEc LINE L1 1414 1582 -4818 8 1150 1036 74 7 0 chr15 74063870 74064019 -29430955 - Lx LINE L1 -843 5811 5662 8 1150 573 39 13 0 chr15 74063998 74064075 -29430899 + L1_Mus4 LINE L1 5813 5890 -746 8 1150 234 0 0 0 chr15 74064771 74064797 -29430177 + (TG)n Simple_repeat Simple_repeat 2 27 0 8 1150 216 158 0 0 chr15 74064917 74064955 -29430019 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 1150 250 241 0 0 chr15 74065044 74065102 -29429872 + GA-rich Low_complexity Low_complexity 1 58 0 8 1150 256 297 98 9 chr15 74065681 74065793 -29429181 - MLT1A LTR MaLR -247 127 6 8 1150 271 314 51 34 chr15 74067288 74067463 -29427511 + Charlie4 DNA MER1_type 1740 1917 -44 8 1150 1109 259 76 15 chr15 74068357 74068620 -29426354 + MTE2b LTR MaLR 4 282 -97 9 1150 202 167 48 0 chr15 74068693 74068735 -29426239 + GA-rich Low_complexity Low_complexity 3 46 0 9 1150 445 55 0 0 chr15 74069624 74069679 -29425295 - ORR1A2 LTR MaLR 0 326 272 9 1150 1068 87 0 0 chr15 74069683 74069821 -29425153 - B1_Mus1 SINE Alu 0 148 11 9 1150 1901 120 54 10 chr15 74069794 74070088 -29424886 - ORR1A2 LTR MaLR -20 307 1 9 1150 5613 107 22 10 chr15 74070088 74070916 -29424058 - ORR1A2-int LTR MaLR 0 1963 1126 9 1150 966 170 13 0 chr15 74072138 74072297 -29422677 + MTD LTR MaLR 2 162 -257 9 1150 2316 290 91 17 chr15 74072300 74074016 -29420958 - L1MDa LINE L1 -1948 4589 2678 9 1150 325 318 30 22 chr15 74074107 74074242 -29420732 - L1MDa LINE L1 -5815 818 683 9 1150 340 305 104 38 chr15 74074418 74074477 -29420497 - L1MDa LINE L1 -6287 346 287 9 1150 252 0 0 0 chr15 74074477 74074505 -29420469 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 9 1150 340 305 104 38 chr15 74074505 74074762 -29420212 - L1MDa LINE L1 -6347 286 9 9 1150 925 152 178 0 chr15 74074964 74075155 -29419819 - URR1B DNA MER1_type 0 225 1 9 1150 247 281 61 30 chr15 74075410 74075509 -29419465 + MLT1A0 LTR MaLR 22 123 -242 9 1150 366 23 0 0 chr15 74075623 74075666 -29419308 + (TG)n Simple_repeat Simple_repeat 1 43 0 9 1150 205 195 0 0 chr15 74075666 74075707 -29419267 + GA-rich Low_complexity Low_complexity 2 42 0 1 1150 288 0 0 0 chr15 74075989 74076021 -29418953 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1150 934 310 30 61 chr15 74076434 74076799 -29418175 + ORR1E LTR MaLR 10 379 0 1 1150 965 304 57 40 chr15 74078267 74078983 -29415991 + L1MA10 LINE L1 5606 6333 -1 1 1150 1404 238 86 41 chr15 74079474 74079891 -29415083 - RMER4B LTR ERVK -133 452 17 1 1150 1575 228 61 14 chr15 74081313 74081504 -29413470 - MTE2b LTR MaLR 0 379 182 1 1150 306 0 0 0 chr15 74081504 74081538 -29413436 + (TTTTC)n Simple_repeat Simple_repeat 1 34 0 1 1150 1030 130 6 6 chr15 74081539 74081717 -29413257 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 1 1150 1575 228 61 14 chr15 74081717 74081884 -29413090 - MTE2b LTR MaLR -198 181 4 1 1150 203 193 95 95 chr15 74083098 74083161 -29411813 + MIR3 SINE MIR 96 158 -50 1 1150 226 300 134 37 chr15 74083305 74083492 -29411482 - MLT2B2 LTR ERVL -80 435 231 1 1150 189 0 0 0 chr15 74083677 74083698 -29411276 + (CCCCAG)n Simple_repeat Simple_repeat 1 21 0 1 1150 437 349 103 40 chr15 74083834 74084135 -29410839 + L1MEc LINE L1 36 355 -6045 1 1150 452 306 91 14 chr15 74084345 74084554 -29410420 + L1MEc LINE L1 5299 5523 -796 1 1150 801 260 86 131 chr15 74084556 74084915 -29410059 + ORR1E LTR MaLR 7 349 -10 1 1150 320 308 61 8 chr15 74084924 74085055 -29409919 + L1MD LINE L1 5354 5491 -751 1 1150 234 204 0 20 chr15 74085580 74085630 -29409344 + GA-rich Low_complexity Low_complexity 2 50 0 1 1150 343 300 75 0 chr15 74085774 74085975 -29408999 + L1MD3 LINE L1 6633 6845 -1150 1 1150 514 172 32 0 chr15 74085978 74086135 -29408839 + (TAGA)n Simple_repeat Simple_repeat 1 162 0 1 1150 1568 259 11 17 chr15 74086145 74086499 -29408475 - MTE2b LTR MaLR -8 371 20 1 1150 423 0 0 0 chr15 74086572 74086619 -29408355 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 1 1150 1664 206 24 20 chr15 74086626 74086967 -29408007 - MTE2b LTR MaLR -3 376 35 1 1150 607 123 45 7 chr15 74087017 74087172 -29407802 + (TAGA)n Simple_repeat Simple_repeat 1 161 0 1 1150 452 301 127 31 chr15 74087264 74087586 -29407388 + L1MD3 LINE L1 6938 7290 -705 1 1150 238 190 0 23 chr15 74087856 74087899 -29407075 + tRNA-Val-GTY tRNA tRNA 2 43 -33 1 1150 288 302 113 0 chr15 74088586 74088745 -29406229 + L1MCa LINE L1 1465 1641 -4867 1 1150 545 268 125 10 chr15 74089179 74089379 -29405595 - MER58A DNA MER1_type -1 223 1 1 1150 291 279 10 31 chr15 74089476 74089572 -29405402 + MTEb LTR MaLR 1 94 -285 1 1150 258 347 61 27 chr15 74091574 74091722 -29403252 + MER46C DNA MER2_type 81 233 -105 1 1150 189 0 0 0 chr15 74091761 74091782 -29403192 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1150 238 294 22 66 chr15 74091867 74091958 -29403016 + MIRc SINE MIR 49 135 -133 1 1150 468 0 0 0 chr15 74094704 74094756 -29400218 + (CTTG)n Simple_repeat Simple_repeat 2 53 0 1 1150 184 250 0 20 chr15 74095057 74095106 -29399868 + L3 LINE CR1 1021 1068 -3421 1 1150 675 241 0 0 chr15 74096864 74097219 -29397755 + (TG)n Simple_repeat Simple_repeat 1 355 0 1 1150 272 75 13 130 chr15 74097247 74097298 -29397676 + MT2A LTR ERVL 466 514 -19 1 1150 1401 160 0 30 chr15 74097298 74097530 -29397444 + URR1A DNA MER1_type 1 225 -1 1 1150 272 75 13 130 chr15 74097530 74097555 -29397419 + MT2A LTR ERVL 515 533 0 1 1150 516 45 0 0 chr15 74097833 74097900 -29397074 + (GA)n Simple_repeat Simple_repeat 2 68 0 1 1150 1145 211 76 80 chr15 74097900 74098314 -29396660 - MT2A LTR ERVL -79 454 1 1 1150 283 140 0 0 chr15 74098316 74098366 -29396608 - MERVL_2A-int LTR ERVL -2 5759 5710 1 1150 274 237 0 38 chr15 74098366 74098445 -29396529 - ORR1A3-int LTR MaLR -1321 642 567 1 1150 24555 157 27 4 chr15 74098451 74102608 -29392366 - MERVL_2A-int LTR ERVL -71 5690 1439 1 1150 551 196 19 201 chr15 74102608 74102810 -29392164 - MT2A LTR ERVL -422 162 1 1 1150 265 276 12 50 chr15 74104522 74104602 -29390372 + MIR SINE MIR 75 151 -111 1 1150 941 125 26 0 chr15 74104710 74104862 -29390112 + URR1B DNA MER1_type 27 182 -43 1 1150 314 333 14 21 chr15 74107591 74107735 -29387239 + (TCTG)n Simple_repeat Simple_repeat 2 144 0 1 1150 207 0 0 0 chr15 74108823 74108846 -29386128 + (TGGGGG)n Simple_repeat Simple_repeat 1 23 0 1 1150 350 238 104 47 chr15 74108922 74109028 -29385946 + PB1D9 SINE Alu 1 112 -8 1 1150 2831 192 64 24 chr15 74109066 74109648 -29385326 + RMER19C LTR ERVK 1 605 -6 1 1150 268 332 128 40 chr15 74110768 74111019 -29383955 - MLT1C LTR MaLR -12 455 183 1 1150 216 260 0 25 chr15 74111801 74111874 -29383100 - MIRm SINE MIR -91 177 108 1 1150 365 289 14 22 chr15 74112785 74112923 -29382051 + (CATA)n Simple_repeat Simple_repeat 4 140 0 1 1150 317 221 39 0 chr15 74113622 74113699 -29381275 - L4 LINE RTE 0 2029 1950 1 1150 234 81 0 0 chr15 74113985 74114022 -29380952 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 1 1150 306 0 0 0 chr15 74114075 74114109 -29380865 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1150 692 218 13 39 chr15 74114275 74114428 -29380546 - B1_Mur2 SINE Alu 0 149 1 1 1150 383 266 97 67 chr15 74114687 74114852 -29380122 + MLT1C LTR MaLR 290 459 -8 1 1150 384 22 0 0 chr15 74115273 74115318 -29379656 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 1 1150 199 264 0 0 chr15 74115521 74115574 -29379400 + L4 LINE RTE 1977 2029 0 1 1150 423 0 0 0 chr15 74115797 74115844 -29379130 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 1150 396 0 0 0 chr15 74115971 74116015 -29378959 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 1150 307 298 90 28 chr15 74116440 74116585 -29378389 - MLT1C LTR MaLR -1 466 313 1 1150 663 216 0 0 chr15 74117395 74117562 -29377412 + CT-rich Low_complexity Low_complexity 1 167 0 1 1150 213 194 0 0 chr15 74117563 74117599 -29377375 + polypyrimidine Low_complexity Low_complexity 1 36 0 1 1150 263 296 21 54 chr15 74117832 74118018 -29376956 + (CCCA)n Simple_repeat Simple_repeat 1 180 0 1 1150 496 248 45 8 chr15 74118099 74118233 -29376741 + B4A SINE B4 1 139 -153 1 1150 243 136 23 0 chr15 74118234 74118278 -29376696 + B4A SINE B4 95 139 -153 1 1150 243 136 23 0 chr15 74118279 74118323 -29376651 + B4A SINE B4 95 139 -153 1 1150 243 136 23 0 chr15 74118324 74118368 -29376606 + B4A SINE B4 95 139 -153 1 1150 222 159 23 0 chr15 74118369 74118413 -29376561 + B4A SINE B4 95 139 -153 1 1150 476 254 36 78 chr15 74118414 74118606 -29376368 + B4A SINE B4 95 278 -14 1 1150 243 188 0 0 chr15 74118643 74118691 -29376283 + GA-rich Low_complexity Low_complexity 2 49 0 1 1150 1029 150 0 0 chr15 74118693 74118873 -29376101 + (GGA)n Simple_repeat Simple_repeat 1 180 0 1 1150 288 0 0 0 chr15 74119279 74119311 -29375663 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 1150 663 13 0 0 chr15 74121185 74121261 -29373713 + (GGAGA)n Simple_repeat Simple_repeat 3 78 0 1 1150 707 233 139 0 chr15 74124091 74124263 -29370711 + B3A SINE B2 3 198 0 1 1150 298 252 173 0 chr15 74126068 74126195 -29368779 + L2b LINE L2 3014 3162 -213 1 1150 180 111 0 0 chr15 74126235 74126262 -29368712 + (CAT)n Simple_repeat Simple_repeat 2 28 0 1 1150 263 347 99 61 chr15 74128359 74128540 -29366434 - LTR33 LTR ERVL -291 224 37 1 1150 228 298 0 0 chr15 74128618 74128675 -29366299 + (ATGGTG)n Simple_repeat Simple_repeat 3 59 0 1 1150 287 337 11 54 chr15 74128766 74128951 -29366023 + (ATGGTG)n Simple_repeat Simple_repeat 3 179 0 1 1150 318 301 115 65 chr15 74129150 74129367 -29365607 + B4 SINE B4 2 229 -63 1 1150 286 214 14 0 chr15 74129429 74129569 -29365405 + GA-rich Low_complexity Low_complexity 2 143 0 1 1150 688 248 58 137 chr15 74130575 74130832 -29364142 + MTEa LTR MaLR 8 260 -119 1 1150 432 0 0 0 chr15 74130832 74130880 -29364094 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1150 688 253 58 122 chr15 74130880 74131019 -29363955 + MTEa LTR MaLR 261 359 0 1 1150 2220 104 25 19 chr15 74132050 74132414 -29362560 + MTB_Mm LTR MaLR 4 369 -38 1 1150 278 305 0 0 chr15 74134059 74134141 -29360833 + G-rich Low_complexity Low_complexity 1 82 0 1 1150 369 181 29 35 chr15 74134142 74134314 -29360660 + (TGGA)n Simple_repeat Simple_repeat 4 174 0 1 1150 299 191 15 0 chr15 74134406 74134474 -29360500 + GA-rich Low_complexity Low_complexity 1 69 0 1 1150 763 160 6 6 chr15 74134487 74134644 -29360330 + (TGGA)n Simple_repeat Simple_repeat 1 157 0 1 1150 612 349 71 8 chr15 74134647 74135043 -29359931 + Lx8 LINE L1 6975 7395 -78 1 1150 513 0 0 0 chr15 74135126 74135183 -29359791 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 1 1150 1251 26 0 0 chr15 74135474 74135625 -29359349 + (TC)n Simple_repeat Simple_repeat 1 151 0 1 1150 248 326 11 33 chr15 74138375 74138467 -29356507 - ORR1E LTR MaLR -2 357 268 1 1150 258 272 25 0 chr15 74138701 74138782 -29356192 - Ricksha_c DNA MuDR -1594 454 372 1 1150 7575 59 4 2 chr15 74139114 74140280 -29354694 - L1Md_F2 LINE L1 0 6582 5413 1 1150 3435 47 2 0 chr15 74140277 74140745 -29354229 + L1_Mm LINE L1 1962 2430 -3453 1 1150 313 344 30 0 chr15 74141998 74142129 -29352845 - MER77 LTR ERVL -188 419 285 1 1150 271 318 19 75 chr15 74142266 74142426 -29352548 + MER53 DNA hAT 42 192 -1 1 1150 591 85 0 0 chr15 74142789 74142871 -29352103 + (TC)n Simple_repeat Simple_repeat 1 82 0 1 1150 279 0 0 0 chr15 74142896 74142927 -29352047 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1150 331 246 21 186 chr15 74143033 74143173 -29351801 - PB1D10 SINE Alu 0 117 1 1 1150 182 62 31 0 chr15 74143176 74143208 -29351766 + (GTTTG)n Simple_repeat Simple_repeat 5 37 0 1 1150 1056 52 88 0 chr15 74143208 74143344 -29351630 - B1_Mus1 SINE Alu 0 148 1 1 1150 686 282 82 71 chr15 74143377 74143659 -29351315 + B4A SINE B4 5 289 -3 1 1150 800 168 80 0 chr15 74144029 74144166 -29350808 + B1_Mus1 SINE Alu 1 148 0 1 1150 444 19 0 0 chr15 74146017 74146070 -29348904 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 2 1150 761 63 8 45 chr15 74146070 74146202 -29348772 + (GGGAA)n Simple_repeat Simple_repeat 2 128 0 2 1150 1106 111 0 16 chr15 74146213 74146396 -29348578 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 2 1150 781 296 128 67 chr15 74149540 74150213 -29344761 + L1MB2 LINE L1 5286 5999 -172 2 1150 360 0 0 0 chr15 74150249 74150289 -29344685 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1150 322 264 52 43 chr15 74150389 74150504 -29344470 - PB1D10 SINE Alu -1 116 1 2 1150 240 250 88 0 chr15 74150534 74150602 -29344372 - RMER30 DNA MER1_type -29 173 100 2 1150 977 288 14 14 chr15 74150603 74150881 -29344093 + B4A SINE B4 1 278 -14 2 1150 207 333 0 0 chr15 74150901 74150973 -29344001 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 1150 249 352 29 0 chr15 74150980 74151085 -29343889 - RMER30 DNA MER1_type -88 114 7 2 1150 215 309 40 30 chr15 74153113 74153213 -29341761 - MIRb SINE MIR -71 197 97 2 1150 261 291 58 0 chr15 74153326 74153412 -29341562 + MLT1B LTR MaLR 7 97 -293 2 1150 441 0 0 0 chr15 74153967 74154016 -29340958 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1150 241 281 43 3 chr15 74157544 74157621 -29337353 - MIRc SINE MIR -117 159 79 2 1150 387 261 11 15 chr15 74163224 74163494 -29331480 + (CCA)n Simple_repeat Simple_repeat 1 269 0 2 1150 461 299 32 26 chr15 74163494 74163683 -29331291 + HAL1-2a_MD LINE L1 2326 2515 -509 2 1150 369 307 7 28 chr15 74163689 74163830 -29331144 + HAL1-2a_MD LINE L1 2345 2482 -542 2 1150 2388 98 86 8 chr15 74166969 74167320 -29327654 - ORR1C1 LTR MaLR 0 378 1 2 1150 228 274 74 41 chr15 74168370 74168492 -29326482 + L2 LINE L2 253 378 -3041 2 1150 1038 228 124 31 chr15 74168700 74169022 -29325952 - MTEa LTR MaLR -2 377 26 2 1150 281 271 115 8 chr15 74173149 74173279 -29321695 + MIR SINE MIR 2 145 -117 2 1150 519 318 19 26 chr15 74173385 74173540 -29321434 + RSINE1 SINE B4 4 157 -8 2 1150 255 326 14 21 chr15 74174495 74174729 -29320245 + GA-rich Low_complexity Low_complexity 1 232 0 2 1150 299 337 11 22 chr15 74174750 74174929 -29320045 + (TGGA)n Simple_repeat Simple_repeat 4 180 0 2 1150 435 149 0 0 chr15 74174993 74175067 -29319907 + (TAGA)n Simple_repeat Simple_repeat 3 76 0 2 1150 703 351 87 24 chr15 74175636 74176062 -29318912 + MLT1G1 LTR MaLR 75 527 -52 2 1150 378 0 0 0 chr15 74178167 74178209 -29316765 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1150 390 246 0 0 chr15 74179870 74179984 -29314990 + (CA)n Simple_repeat Simple_repeat 2 115 0 2 1150 2120 128 76 11 chr15 74182480 74182835 -29312139 - ORR1C1 LTR MaLR 0 378 1 2 1150 345 24 0 0 chr15 74183510 74183552 -29311422 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1150 5874 118 88 18 chr15 74183561 74184517 -29310457 + RLTR13D2 LTR ERVK 1 1023 0 2 1150 207 0 0 0 chr15 74185091 74185114 -29309860 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 2 1150 259 299 111 31 chr15 74185435 74185597 -29309377 - MER53 DNA hAT -14 179 5 2 1151 228 228 0 0 chr15 74188348 74188405 -29306569 - MIRc SINE MIR -52 156 100 2 1151 804 141 0 0 chr15 74189650 74189785 -29305189 + (TCCC)n Simple_repeat Simple_repeat 4 138 0 2 1151 181 241 18 36 chr15 74189974 74190030 -29304944 - L2 LINE L2 -1788 1631 1577 2 1151 369 337 16 39 chr15 74190382 74190564 -29304410 + (CCCA)n Simple_repeat Simple_repeat 3 180 0 2 1151 617 137 8 0 chr15 74190586 74190703 -29304271 + (TCCA)n Simple_repeat Simple_repeat 1 118 0 2 1151 2251 101 54 8 chr15 74191161 74191512 -29303462 - IAPLTR1_Mm LTR ERVK 0 367 1 2 1151 53213 31 9 6 chr15 74191516 74197971 -29297003 - IAPEz-int LTR ERVK -3 6478 8 2 1151 2251 101 54 8 chr15 74197971 74198322 -29296652 - IAPLTR1_Mm LTR ERVK 0 367 1 2 1151 208 247 114 34 chr15 74202234 74202322 -29292652 + MIRm SINE MIR 92 186 -90 2 1151 198 0 0 0 chr15 74203840 74203862 -29291112 + (CAA)n Simple_repeat Simple_repeat 1 22 0 2 1151 276 235 0 29 chr15 74204243 74204313 -29290661 + tRNA-Ala-GCY_ tRNA tRNA 1 68 -7 2 1151 342 0 0 0 chr15 74204354 74204392 -29290582 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1151 423 38 0 0 chr15 74204392 74204444 -29290530 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 1151 440 306 55 32 chr15 74205219 74205530 -29289444 + L1M5 LINE L1 2677 2994 -3152 2 1151 624 252 0 0 chr15 74205581 74205716 -29289258 + ID_B1 SINE B4 82 216 -8 2 1151 251 333 57 32 chr15 74205585 74205743 -29289231 - YREP_Mm Unknown Unknown -1501 311 150 2 1151 656 290 20 89 chr15 74206062 74206308 -29288666 + B4A SINE B4 1 229 -63 2 1151 930 208 16 5 chr15 74206310 74206494 -29288480 + B3 SINE B2 5 190 -26 2 1151 294 339 91 5 chr15 74206494 74206681 -29288293 + L1MA6 LINE L1 4746 4948 -1192 2 1151 211 149 0 56 chr15 74206808 74206879 -29288095 + (TCTCTG)n Simple_repeat Simple_repeat 4 70 0 2 1151 260 243 0 0 chr15 74207093 74207167 -29287807 + L1MA6 LINE L1 4975 5048 -1095 2 1151 450 0 0 0 chr15 74207167 74207217 -29287757 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 1151 531 296 7 0 chr15 74207232 74207374 -29287600 + ID_B1 SINE B4 80 222 -2 2 1151 1646 133 15 0 chr15 74207492 74207755 -29287219 - ORR1C1 LTR MaLR -111 267 1 2 1151 752 324 82 65 chr15 74207913 74208024 -29286950 + L1MA6 LINE L1 5316 5424 -876 2 1151 228 270 39 39 chr15 74208024 74208101 -29286873 + ID4 SINE ID 4 80 -3 2 1151 752 324 82 65 chr15 74208101 74208676 -29286298 + L1MA6 LINE L1 5425 6013 -287 2 1151 1226 255 48 56 chr15 74208731 74208939 -29286035 + MTEb LTR MaLR 3 201 -178 2 1151 396 0 0 0 chr15 74208939 74208983 -29285991 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 1151 1226 255 48 56 chr15 74208983 74209152 -29285822 + MTEb LTR MaLR 202 377 -2 2 1151 884 243 40 40 chr15 74209557 74209866 -29285108 + L1M5 LINE L1 5267 5574 -666 2 1151 1796 179 64 13 chr15 74210546 74210919 -29284055 - MTD LTR MaLR -1 418 27 2 1151 350 21 0 21 chr15 74210922 74210970 -29284004 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 1151 234 188 0 0 chr15 74210976 74211024 -29283950 + A-rich Low_complexity Low_complexity 1 48 0 2 1151 2212 135 33 52 chr15 74214088 74214319 -29280655 - MTC LTR MaLR -7 414 191 2 1151 3180 54 18 3 chr15 74214319 74214709 -29280265 + MTA_Mm LTR MaLR 1 396 0 2 1151 2212 135 33 52 chr15 74214709 74214899 -29280075 - MTC LTR MaLR -231 190 1 2 1151 1634 181 149 16 chr15 74215289 74215659 -29279315 + MTD LTR MaLR 1 419 0 2 1151 202 291 8 0 chr15 74216847 74216916 -29278058 + MIRc SINE MIR 20 90 -186 2 1151 277 127 40 53 chr15 74217086 74217161 -29277813 + C-rich Low_complexity Low_complexity 2 75 0 2 1151 469 238 39 67 chr15 74217393 74217573 -29277401 + HAL1-2a_MD LINE L1 2345 2519 -505 2 1151 253 372 39 7 chr15 74221776 74221930 -29273044 - L1M5 LINE L1 -2654 3492 3334 2 1151 535 299 82 0 chr15 74222971 74223155 -29271819 - L1MC LINE L1 -420 5822 5624 2 1151 254 322 6 75 chr15 74223320 74223527 -29271447 - L1MC LINE L1 -784 5362 5177 2 1151 426 238 29 10 chr15 74224291 74224393 -29270581 - PB1D10 SINE Alu -7 110 7 2 1151 22 0 0 0 chr15 74224896 74224918 -29270056 + AT_rich Low_complexity Low_complexity 1 22 0 2 1151 306 67 0 0 chr15 74226034 74226079 -29268895 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 1151 391 340 199 9 chr15 74226593 74226920 -29268054 + MLT1J LTR MaLR 41 429 -83 2 1151 181 301 65 52 chr15 74227070 74227147 -29267827 + L2b LINE L2 3272 3349 -26 2 1151 1190 84 54 6 chr15 74230855 74231023 -29263951 + B2_Mm1t SINE B2 1 176 -17 2 1151 189 297 110 0 chr15 74232903 74232994 -29261980 - MIRc SINE MIR -119 149 49 2 1151 405 0 0 0 chr15 74235106 74235151 -29259823 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1151 189 147 0 0 chr15 74236298 74236332 -29258642 + (GGGA)n Simple_repeat Simple_repeat 2 35 0 2 1151 500 338 48 52 chr15 74237370 74237679 -29257295 + MLT1G LTR MaLR 207 514 -77 2 1151 1022 286 84 14 chr15 74239118 74239486 -29255488 - MTE-int LTR MaLR -406 1174 781 2 1151 1377 47 0 0 chr15 74240988 74241158 -29253816 - L1Md_T LINE L1 -428 6154 5985 2 1151 3603 29 2 0 chr15 74241158 74241573 -29253401 + L1Md_T LINE L1 6167 6582 0 2 1151 769 110 6 49 chr15 74245451 74245613 -29249361 + GA-rich Low_complexity Low_complexity 2 156 0 2 1151 405 0 0 0 chr15 74245615 74245660 -29249314 + (GAAAA)n Simple_repeat Simple_repeat 1 45 0 2 1151 423 255 41 0 chr15 74246208 74246306 -29248668 - B1F SINE Alu -10 139 38 2 1151 360 111 0 0 chr15 74246886 74246949 -29248025 + (CA)n Simple_repeat Simple_repeat 2 64 0 2 1151 226 295 0 64 chr15 74246954 74247048 -29247926 + RMER6D LTR ERVK 121 208 -512 2 1151 459 0 0 0 chr15 74254122 74254173 -29240801 + (CAAAA)n Simple_repeat Simple_repeat 3 53 0 2 1151 342 353 132 15 chr15 74254198 74254523 -29240451 + L1M5 LINE L1 4308 4670 -1476 2 1151 231 299 137 0 chr15 74256366 74256483 -29238491 + MIR3 SINE MIR 42 174 -34 2 1151 2118 108 0 3 chr15 74256663 74256969 -29238005 + MTC LTR MaLR 117 421 0 2 1151 363 333 35 29 chr15 74257451 74257624 -29237350 + MTE2a LTR MaLR 1 174 -245 2 1151 650 259 47 66 chr15 74258226 74258437 -29236537 + MTE2a LTR MaLR 173 379 0 2 1151 231 279 38 12 chr15 74258834 74258914 -29236060 + ID4_ SINE ID 2 83 0 2 1151 241 314 33 71 chr15 74261209 74261391 -29233583 + L1MEc LINE L1 1659 1840 -4499 2 1151 374 294 91 25 chr15 74261633 74261832 -29233142 + L1MEc LINE L1 2082 2293 -4107 2 1151 364 336 185 25 chr15 74262256 74263029 -29231945 + L1MEc LINE L1 2491 3387 -2932 2 1151 463 258 0 108 chr15 74263124 74263272 -29231702 + B1F2 SINE Alu 3 134 -15 2 1151 441 180 0 0 chr15 74263272 74263361 -29231613 + (CA)n Simple_repeat Simple_repeat 2 90 0 2 1151 308 240 0 10 chr15 74263360 74263461 -29231513 + GA-rich Low_complexity Low_complexity 2 101 0 2 1151 490 350 129 0 chr15 74263477 74263803 -29231171 + L1MEc LINE L1 3444 3811 -2508 2 1151 303 317 179 20 chr15 74264019 74264315 -29230659 + L1M5 LINE L1 5052 5394 -752 2 1151 968 277 102 54 chr15 74264591 74265093 -29229881 + RMER1B Other Other 3 857 -485 2 1151 3537 186 66 17 chr15 74265121 74265963 -29229011 + RMER1B Other Other 92 1054 -12 2 1151 2647 134 61 0 chr15 74267031 74267426 -29227548 - MTC LTR MaLR -2 419 1 2 1151 742 306 69 18 chr15 74268805 74269081 -29225893 + B4 SINE B4 1 290 -2 2 1151 228 163 0 0 chr15 74269086 74269129 -29225845 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1151 215 317 0 0 chr15 74269147 74269207 -29225767 + GA-rich Low_complexity Low_complexity 4 63 0 3 1151 296 299 21 0 chr15 74269774 74269871 -29225103 + PB1 SINE Alu 18 116 -11 3 1151 442 302 65 65 chr15 74272608 74272944 -29222030 + L1M5 LINE L1 2824 3159 -2987 3 1151 1326 62 0 0 chr15 74274508 74274685 -29220289 + (CA)n Simple_repeat Simple_repeat 2 178 0 3 1151 325 267 68 122 chr15 74274701 74274906 -29220068 + L1M5 LINE L1 4337 4530 -1616 3 1151 619 258 0 38 chr15 74276191 74276348 -29218626 + B3A SINE B2 48 198 0 3 1151 354 353 88 0 chr15 74276353 74276489 -29218485 + RSINE1 SINE B4 3 150 -15 3 1151 255 312 48 41 chr15 74276742 74276889 -29218085 - Charlie1a DNA MER1_type -52 1403 1256 3 1151 663 144 0 0 chr15 74277110 74277221 -29217753 + (TCCC)n Simple_repeat Simple_repeat 4 114 0 3 1151 3327 255 88 98 chr15 74277224 74278364 -29216610 - RMER1C Other Other 0 1342 237 3 1151 417 20 0 0 chr15 74278364 74278414 -29216560 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1151 3327 255 88 98 chr15 74278414 74278607 -29216367 - RMER1C Other Other -1106 236 22 3 1151 271 333 39 0 chr15 74279330 74279486 -29215488 - MIR SINE MIR -96 180 13 3 1151 426 262 144 35 chr15 74280018 74280220 -29214754 + HAL1 LINE L1 2273 2496 -11 3 1151 443 170 148 10 chr15 74280758 74280859 -29214115 + B1_Mur4 SINE Alu 3 117 -33 3 1151 23 0 0 0 chr15 74285296 74285319 -29209655 + AT_rich Low_complexity Low_complexity 1 23 0 3 1151 242 164 0 162 chr15 74286004 74286084 -29208890 + L1MC4a LINE L1 6772 6838 -1044 3 1151 788 315 73 32 chr15 74287328 74287672 -29207302 + L1M5 LINE L1 2907 3264 -2882 3 1151 876 283 18 9 chr15 74287675 74287896 -29207078 + ID_B1 SINE B4 2 224 0 3 1151 478 176 179 36 chr15 74288303 74288415 -29206559 - RSINE1 SINE B4 -37 128 1 3 1151 658 225 108 38 chr15 74288990 74289175 -29205799 + B3A SINE B2 1 198 0 3 1151 303 309 130 13 chr15 74289548 74289702 -29205272 + L1MB7 LINE L1 5827 5998 -186 3 1151 431 244 35 0 chr15 74289722 74289850 -29205124 + L1MB7 LINE L1 6049 6184 0 3 1151 311 383 90 0 chr15 74289840 74290140 -29204834 + L1M5 LINE L1 4731 5057 -1089 3 1151 261 0 0 0 chr15 74290339 74290368 -29204606 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 3 1151 261 261 0 0 chr15 74291150 74291238 -29203736 + (CA)n Simple_repeat Simple_repeat 2 89 0 3 1151 216 262 74 0 chr15 74292346 74292432 -29202542 + ID2 SINE ID 3 93 -59 3 1151 2074 188 155 10 chr15 74294209 74294326 -29200648 - RMER4B LTR ERVK 0 585 469 3 1151 3644 15 0 0 chr15 74294326 74294722 -29200252 + MTA_Mm LTR MaLR 1 396 0 3 1151 2074 188 155 10 chr15 74294722 74295115 -29199859 - RMER4B LTR ERVK -117 468 2 3 1151 375 297 75 37 chr15 74295632 74295793 -29199181 + MLT1A0 LTR MaLR 28 194 -171 3 1151 7146 67 4 10 chr15 74295869 74296828 -29198146 + L1_Mus1 LINE L1 5615 6567 0 3 1151 360 0 0 0 chr15 74297286 74297326 -29197648 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1151 246 296 50 20 chr15 74297681 74297781 -29197193 + B1F SINE Alu 22 124 -25 3 1151 386 325 90 0 chr15 74298546 74298734 -29196240 + L1MB5 LINE L1 5883 6087 -87 3 1151 315 0 0 0 chr15 74299187 74299222 -29195752 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 1151 325 292 0 0 chr15 74301420 74301492 -29193482 - B4 SINE B4 -2 290 219 3 1151 903 270 29 8 chr15 74301548 74301791 -29193183 - B4 SINE B4 -44 248 1 3 1151 462 18 0 0 chr15 74301871 74301926 -29193048 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1151 187 356 34 11 chr15 74302913 74303001 -29191973 - MIRc SINE MIR -144 124 35 3 1151 1082 312 82 15 chr15 74304078 74304614 -29190360 + L1M3 LINE L1 4723 5294 -846 3 1151 230 279 0 32 chr15 74305230 74305293 -29189681 - MLT1E2 LTR MaLR 0 627 567 3 1151 495 167 21 0 chr15 74305989 74306085 -29188889 + ORR1E LTR MaLR 3 100 -259 3 1151 349 307 34 34 chr15 74306049 74306167 -29188807 + ID_B1 SINE B4 91 208 -16 3 1151 2563 89 0 0 chr15 74306248 74306575 -29188399 + ORR1A4 LTR MaLR 3 329 0 3 1151 485 288 98 9 chr15 74306884 74307108 -29187866 + L1MA8 LINE L1 4812 5055 -1088 3 1151 572 287 113 38 chr15 74307240 74307559 -29187415 + L1MA8 LINE L1 5291 5633 -658 3 1151 385 246 81 35 chr15 74307591 74307766 -29187208 + L1MA8 LINE L1 5852 6040 -257 3 1151 254 333 90 28 chr15 74307952 74308097 -29186877 + ID_B1 SINE B4 8 161 -63 3 1151 248 210 55 48 chr15 74308235 74308380 -29186594 + (TTAA)n Simple_repeat Simple_repeat 4 149 0 3 1151 297 0 0 0 chr15 74308425 74308458 -29186516 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1151 329 316 26 0 chr15 74309891 74310008 -29184966 + L1MD1 LINE L1 6114 6233 -9 3 1151 1646 135 42 7 chr15 74310011 74310317 -29184657 + Lx6 LINE L1 4811 5127 -753 3 1151 2632 211 33 34 chr15 74310313 74310964 -29184010 + Lx6 LINE L1 5595 6217 -1243 3 1151 219 36 0 0 chr15 74312392 74312420 -29182554 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 1152 885 118 0 0 chr15 74319819 74319946 -29175028 - B3 SINE B2 -86 130 4 3 1152 528 201 44 44 chr15 74323156 74323291 -29171683 + RSINE1 SINE B4 25 159 -6 3 1152 2370 115 18 3 chr15 74324090 74324431 -29170543 + ORR1A1 LTR MaLR 1 346 0 3 1152 581 225 0 55 chr15 74324988 74325115 -29169859 + PB1D9 SINE Alu 1 120 0 3 1152 209 189 0 0 chr15 74325292 74325329 -29169645 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1152 1207 68 0 0 chr15 74326832 74326979 -29167995 + B1_Mus2 SINE Alu 1 147 0 3 1152 2485 98 3 12 chr15 74328641 74328971 -29166003 - ORR1A2 LTR MaLR 0 327 1 3 1152 417 90 0 0 chr15 74330880 74330947 -29164027 + (CA)n Simple_repeat Simple_repeat 1 67 0 3 1152 363 345 113 9 chr15 74332348 74332570 -29162404 - RMER15 LTR ERVL -5 570 326 3 1152 1818 170 97 6 chr15 74333734 74334094 -29160880 - ORR1B1 LTR MaLR -1 393 1 3 1152 354 351 29 29 chr15 74334222 74334392 -29160582 + HAL1-2a_MD LINE L1 2323 2492 -532 3 1152 677 166 7 0 chr15 74334397 74334542 -29160432 + (CCA)n Simple_repeat Simple_repeat 1 146 0 3 1152 807 113 28 0 chr15 74334623 74334764 -29160210 - URR1A DNA MER1_type 0 226 82 3 1152 380 349 46 11 chr15 74334848 74335022 -29159952 + MIRc SINE MIR 88 267 -1 3 1152 249 163 0 0 chr15 74335348 74335397 -29159577 + CT-rich Low_complexity Low_complexity 2 50 0 3 1152 789 82 0 0 chr15 74335733 74335843 -29159131 + (TTCC)n Simple_repeat Simple_repeat 4 113 0 3 1152 1128 83 0 0 chr15 74335857 74336014 -29158960 + (TTTC)n Simple_repeat Simple_repeat 3 159 0 3 1152 329 245 85 0 chr15 74336015 74336031 -29158943 - PB1D10 SINE Alu -10 107 6 3 1152 331 218 64 0 chr15 74336031 74336109 -29158865 - ID_B1 SINE B4 -55 169 87 3 1152 517 49 12 12 chr15 74336128 74336210 -29158764 + (TATG)n Simple_repeat Simple_repeat 1 82 0 3 1152 394 136 25 0 chr15 74336212 74336293 -29158681 + GA-rich Low_complexity Low_complexity 1 83 0 3 1152 439 274 137 0 chr15 74336302 74336426 -29158548 - B3A SINE B2 -49 149 9 3 1152 189 0 0 0 chr15 74336451 74336472 -29158502 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 3 1152 787 230 91 30 chr15 74336615 74336812 -29158162 - B3 SINE B2 -7 209 1 3 1152 1334 305 74 9 chr15 74336815 74337498 -29157476 - L1MC1 LINE L1 -111 6233 5474 3 1152 316 345 9 0 chr15 74337592 74337702 -29157272 - B1F2 SINE Alu -7 142 32 3 1152 421 282 90 73 chr15 74337712 74338038 -29156936 - L1MC1 LINE L1 -788 5454 5128 3 1152 333 293 91 0 chr15 74338601 74338700 -29156274 - MLT1C LTR MaLR 0 467 360 3 1152 359 235 0 0 chr15 74340807 74340875 -29154099 + ID4_ SINE ID 5 72 -11 3 1152 303 122 0 0 chr15 74340877 74340926 -29154048 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1152 209 311 114 36 chr15 74341022 74341162 -29153812 + MIRc SINE MIR 55 205 -63 3 1152 187 407 14 33 chr15 74342708 74342890 -29152084 - MIRc SINE MIR -66 202 19 3 1152 349 322 55 44 chr15 74343048 74343230 -29151744 - MER3 DNA MER1_type -7 202 19 3 1152 369 0 0 0 chr15 74345280 74345321 -29149653 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1152 234 0 0 0 chr15 74345321 74345346 -29149628 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 1152 226 209 0 0 chr15 74345724 74345767 -29149207 + RMER30 DNA MER1_type 7 49 -153 3 1152 247 236 27 14 chr15 74346091 74346164 -29148810 + (TCCA)n Simple_repeat Simple_repeat 3 76 0 3 1152 195 146 0 0 chr15 74346726 74346767 -29148207 + (TCC)n Simple_repeat Simple_repeat 3 43 0 3 1152 199 106 20 41 chr15 74346768 74346817 -29148157 + (CCCCG)n Simple_repeat Simple_repeat 2 49 0 3 1152 243 133 0 0 chr15 74346900 74346945 -29148029 + (CGG)n Simple_repeat Simple_repeat 2 46 0 3 1152 246 105 0 0 chr15 74350150 74350188 -29144786 + (CCGCG)n Simple_repeat Simple_repeat 1 38 0 3 1152 513 84 0 0 chr15 74352098 74352169 -29142805 + (TG)n Simple_repeat Simple_repeat 1 71 0 3 1152 234 62 0 0 chr15 74352797 74352829 -29142145 + (CCCCCA)n Simple_repeat Simple_repeat 4 35 0 3 1152 234 0 0 0 chr15 74354490 74354516 -29140458 + (TC)n Simple_repeat Simple_repeat 2 27 0 3 1152 351 0 0 0 chr15 74354516 74354554 -29140420 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1152 180 0 0 0 chr15 74354642 74354662 -29140312 + (CCA)n Simple_repeat Simple_repeat 2 21 0 3 1152 207 250 0 93 chr15 74355580 74355655 -29139319 - MER5B DNA MER1_type -87 91 24 3 1152 486 0 0 0 chr15 74355944 74355998 -29138976 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 1152 905 128 244 0 chr15 74356435 74356615 -29138359 + URR1A DNA MER1_type 3 226 0 3 1152 752 69 0 0 chr15 74358395 74358497 -29136477 + B1_Mus1 SINE Alu 3 104 -44 3 1152 441 198 53 26 chr15 74358497 74358509 -29136465 + ID_B1 SINE B4 84 200 -24 3 1152 228 318 161 6 chr15 74358638 74358793 -29136181 + MIR SINE MIR 50 221 -41 3 1152 252 212 0 74 chr15 74359435 74359557 -29135417 + (CCCTG)n Simple_repeat Simple_repeat 3 115 0 3 1152 196 389 22 0 chr15 74361555 74361638 -29133336 - L2 LINE L2 -1405 2014 1930 3 1152 203 331 175 16 chr15 74361638 74361764 -29133210 + MIRb SINE MIR 2 147 -121 3 1152 231 343 12 40 chr15 74362802 74362975 -29131999 + (TATATG)n Simple_repeat Simple_repeat 3 170 0 4 1152 245 311 33 20 chr15 74363133 74363284 -29131690 + (TATG)n Simple_repeat Simple_repeat 2 154 0 4 1152 181 391 58 0 chr15 74363806 74363893 -29131081 + L2b LINE L2 3276 3367 -8 4 1152 207 100 0 0 chr15 74365998 74366028 -29128946 + (TGGGGG)n Simple_repeat Simple_repeat 2 31 0 4 1152 23 0 0 0 chr15 74372633 74372656 -29122318 + GC_rich Low_complexity Low_complexity 1 23 0 4 1152 390 316 8 17 chr15 74372785 74372904 -29122070 + MIRm SINE MIR 38 155 -121 4 1152 214 330 54 11 chr15 74374878 74374970 -29120004 + MIRm SINE MIR 55 150 -126 4 1152 224 342 19 12 chr15 74379807 74379904 -29115070 + MIR SINE MIR 67 175 -101 4 1152 1029 79 0 0 chr15 74380143 74380283 -29114691 + (GA)n Simple_repeat Simple_repeat 1 140 0 4 1152 516 72 0 0 chr15 74383957 74384026 -29110948 + (GGA)n Simple_repeat Simple_repeat 2 70 0 4 1152 306 0 0 0 chr15 74384622 74384656 -29110318 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 4 1152 887 172 0 0 chr15 74384656 74384790 -29110184 - B1_Mus1 SINE Alu -13 135 2 4 1152 1258 99 29 6 chr15 74384792 74384965 -29110009 - B2_Mm2 SINE B2 -15 180 4 4 1152 204 233 0 0 chr15 74385473 74385516 -29109458 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 4 1152 347 213 119 69 chr15 74385846 74385947 -29109027 - PB1D7 SINE Alu 0 120 15 4 1152 423 0 0 0 chr15 74385948 74385995 -29108979 + (TTTTG)n Simple_repeat Simple_repeat 4 50 0 4 1152 444 19 0 0 chr15 74386610 74386663 -29108311 + (TGG)n Simple_repeat Simple_repeat 1 53 0 4 1152 279 0 0 0 chr15 74386663 74386694 -29108280 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1152 306 0 0 0 chr15 74386988 74387022 -29107952 + (TCTG)n Simple_repeat Simple_repeat 2 35 0 4 1152 328 343 17 22 chr15 74387992 74388171 -29106803 + (TGG)n Simple_repeat Simple_repeat 3 180 0 4 1152 246 293 101 25 chr15 74393129 74393248 -29101726 - MIR SINE MIR -116 146 19 4 1152 48 114 0 0 chr15 74394072 74394309 -29100665 + GC_rich Low_complexity Low_complexity 1 237 0 4 1152 180 0 0 0 chr15 74394314 74394334 -29100640 + (CCGGG)n Simple_repeat Simple_repeat 2 21 0 4 1152 27 49 0 0 chr15 74394537 74394578 -29100396 + GC_rich Low_complexity Low_complexity 1 41 0 4 1152 250 292 148 16 chr15 74398422 74398544 -29096430 - L2b LINE L2 -225 3150 3013 4 1152 872 73 16 0 chr15 74400437 74400561 -29094413 + (TCCC)n Simple_repeat Simple_repeat 3 128 0 4 1152 206 285 0 7 chr15 74401554 74401692 -29093282 + (ATGGTG)n Simple_repeat Simple_repeat 2 138 0 4 1152 237 243 0 0 chr15 74401668 74401738 -29093236 + (TGG)n Simple_repeat Simple_repeat 2 71 0 4 1152 267 103 0 0 chr15 74401956 74401995 -29092979 + (CCCTG)n Simple_repeat Simple_repeat 1 39 0 4 1152 1009 128 18 0 chr15 74403961 74404125 -29090849 + URR1A DNA MER1_type 54 220 -6 4 1152 424 299 44 33 chr15 74404125 74404144 -29090830 - CYRA11_Mm Unknown Y-chromosome -275 342 158 4 1152 202 288 22 139 chr15 74404858 74404995 -29089979 - MIRb SINE MIR -125 143 23 4 1152 195 69 0 0 chr15 74408603 74408632 -29086342 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 1152 3286 55 8 0 chr15 74412839 74413236 -29081738 - MTB LTR MaLR 0 400 1 4 1152 186 296 74 0 chr15 74413525 74413579 -29081395 - MIR SINE MIR -62 146 89 4 1152 181 200 217 0 chr15 74413861 74413921 -29081053 + MIRm SINE MIR 118 190 -86 4 1152 1802 161 164 0 chr15 74415937 74416267 -29078707 - ORR1C2 LTR MaLR 0 384 1 4 1152 235 220 0 0 chr15 74417704 74417763 -29077211 + (CCA)n Simple_repeat Simple_repeat 2 60 0 4 1152 429 20 0 0 chr15 74419959 74420009 -29074965 + (TCCTG)n Simple_repeat Simple_repeat 1 50 0 4 1152 1883 76 84 23 chr15 74421815 74421859 -29073115 - ORR1A2 LTR MaLR 0 327 290 4 1152 3046 82 20 2 chr15 74421859 74422252 -29072722 - MTB LTR MaLR 0 400 1 4 1152 1883 76 84 23 chr15 74422252 74422515 -29072459 - ORR1A2 LTR MaLR -38 289 1 4 1152 317 316 30 65 chr15 74422982 74423151 -29071823 - HAL1-2a_MD LINE L1 -516 2508 2346 4 1152 207 100 0 0 chr15 74423154 74423184 -29071790 + (ATGGTG)n Simple_repeat Simple_repeat 6 35 0 4 1152 206 280 0 0 chr15 74423234 74423284 -29071690 + (TGG)n Simple_repeat Simple_repeat 1 50 0 4 1152 191 354 49 93 chr15 74425899 74426061 -29068913 - MIRb SINE MIR -92 176 22 4 1152 308 302 23 8 chr15 74426730 74426860 -29068114 - L1M5 LINE L1 -3100 3046 2915 4 1152 254 257 71 98 chr15 74426968 74427080 -29067894 - PB1D10 SINE Alu 0 117 9 4 1152 387 0 0 0 chr15 74427298 74427341 -29067633 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1152 589 338 23 37 chr15 74427344 74427559 -29067415 + MER21B LTR ERV1 53 264 -599 4 1152 297 235 91 77 chr15 74427550 74427693 -29067281 - MLT1B LTR MaLR -44 346 202 4 1152 244 372 75 30 chr15 74427680 74427813 -29067161 + MER21B LTR ERV1 258 396 -467 4 1152 310 269 43 0 chr15 74427849 74427942 -29067032 + MER21B LTR ERV1 637 733 -130 4 1152 423 0 0 0 chr15 74428180 74428227 -29066747 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1152 201 167 12 71 chr15 74428482 74428566 -29066408 + CT-rich Low_complexity Low_complexity 3 81 0 4 1152 228 281 30 30 chr15 74428758 74428857 -29066117 - L1MD3 LINE L1 -42 7953 7855 4 1152 275 327 14 0 chr15 74429300 74429381 -29065593 - ID4_ SINE ID -62 90 9 4 1152 222 300 0 0 chr15 74429422 74429482 -29065492 - PB1D10 SINE Alu -34 83 24 4 1152 390 301 195 21 chr15 74429529 74429594 -29065380 - B4A SINE B4 -8 284 212 4 1152 844 91 0 15 chr15 74429594 74429728 -29065246 + (TTA)n Simple_repeat Simple_repeat 3 134 0 4 1152 390 301 195 21 chr15 74429728 74429903 -29065071 - B4A SINE B4 -81 211 3 4 1152 312 359 70 37 chr15 74429971 74430185 -29064789 - L1MD LINE L1 -2178 5817 5597 4 1152 597 280 0 0 chr15 74430483 74430615 -29064359 - B1F SINE Alu -9 140 9 4 1152 1158 191 24 5 chr15 74430670 74430880 -29064094 - B3 SINE B2 0 216 3 4 1152 290 333 23 16 chr15 74431669 74431797 -29063177 - L1MD2 LINE L1 -6203 344 216 4 1152 1480 239 34 20 chr15 74432339 74432694 -29062280 - MTEb LTR MaLR 0 379 20 4 1152 194 105 0 26 chr15 74433257 74433296 -29061678 + (AGGGGG)n Simple_repeat Simple_repeat 3 40 0 4 1152 4806 45 0 3 chr15 74433330 74433906 -29061068 - L1Md_F2 LINE L1 0 6582 6009 4 1152 298 270 40 87 chr15 74434533 74434683 -29060291 - RMER20B LTR ERVK -251 376 234 4 1152 232 271 80 40 chr15 74438926 74439026 -29055948 + LTR85c LTR Gypsy? 703 806 -17 4 1152 2204 167 32 30 chr15 74439284 74439723 -29055251 + BGLII_B LTR ERVK 2 441 0 4 1152 299 312 105 18 chr15 74445977 74446091 -29048883 - MIRc SINE MIR -117 151 28 4 1152 248 327 12 47 chr15 74447037 74447100 -29047874 + (TATG)n Simple_repeat Simple_repeat 2 62 0 4 1152 336 102 0 0 chr15 74447100 74447149 -29047825 + (CGTG)n Simple_repeat Simple_repeat 3 51 0 4 1152 248 327 12 47 chr15 74447149 74447255 -29047719 + (TATG)n Simple_repeat Simple_repeat 3 105 0 4 1152 201 237 0 0 chr15 74447259 74447318 -29047656 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1152 320 256 94 15 chr15 74447348 74447506 -29047468 - L1MEc LINE L1 -4874 1541 1334 4 1153 342 299 54 20 chr15 74449045 74449192 -29045782 - L1MC4 LINE L1 -188 7854 7703 4 1153 267 93 0 0 chr15 74449216 74449259 -29045715 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1153 354 108 0 0 chr15 74449260 74449325 -29045649 + (CAGA)n Simple_repeat Simple_repeat 2 66 0 4 1153 1022 280 80 11 chr15 74449999 74450592 -29044382 - L1M4 LINE L1 -661 5783 5134 4 1153 721 264 42 6 chr15 74450593 74450761 -29044213 - ID_B1 SINE B4 -1 223 50 4 1153 527 310 48 5 chr15 74451884 74452072 -29042902 - MER21B LTR ERV1 -98 765 570 4 1153 633 27 0 0 chr15 74452360 74452435 -29042539 + (CA)n Simple_repeat Simple_repeat 2 76 0 4 1153 453 329 143 30 chr15 74452584 74452850 -29042124 - MER21B LTR ERV1 -300 563 268 4 1153 2249 119 22 0 chr15 74454145 74454465 -29040509 + ORR1A2 LTR MaLR 1 327 0 4 1153 879 137 31 0 chr15 74454559 74454858 -29040116 + CT-rich Low_complexity Low_complexity 1 308 0 4 1153 294 221 40 32 chr15 74454869 74454995 -29039979 + (TCTA)n Simple_repeat Simple_repeat 2 128 0 4 1153 414 0 0 0 chr15 74455019 74455065 -29039909 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1153 183 80 0 0 chr15 74455577 74455602 -29039372 + (TTAG)n Simple_repeat Simple_repeat 4 28 0 4 1153 289 218 26 0 chr15 74456943 74457021 -29037953 + (CA)n Simple_repeat Simple_repeat 1 80 0 4 1153 1178 158 144 227 chr15 74462346 74462755 -29032219 + ORR1C1 LTR MaLR 4 378 0 4 1153 763 265 139 73 chr15 74463279 74463580 -29031394 + MTEb LTR MaLR 27 347 -32 4 1153 390 69 0 0 chr15 74465856 74465914 -29029060 + (TTGG)n Simple_repeat Simple_repeat 2 59 0 4 1153 180 0 0 0 chr15 74466505 74466525 -29028449 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1153 183 100 0 0 chr15 74467804 74467834 -29027140 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 1153 232 296 64 91 chr15 74470446 74470762 -29024212 - ORR1D2 LTR MaLR -52 307 4 4 1153 261 331 108 27 chr15 74474217 74474403 -29020571 - L1MD LINE L1 -1317 4829 4629 4 1153 230 262 110 24 chr15 74475098 74475180 -29019794 - MLT1J-int LTR MaLR -442 945 857 4 1153 631 242 204 17 chr15 74478715 74478896 -29016078 + B3 SINE B2 2 216 0 4 1153 1041 120 229 0 chr15 74478937 74479112 -29015862 - B3 SINE B2 0 216 2 4 1153 324 278 21 0 chr15 74479585 74479682 -29015292 - MER52-int LTR ERV1 -3363 3728 3630 4 1153 675 194 52 0 chr15 74479723 74479857 -29015117 - B1_Mm SINE Alu -1 146 6 4 1153 279 279 16 98 chr15 74479766 74479860 -29015114 - MT2B LTR ERVL -344 257 169 4 1153 495 48 0 0 chr15 74479860 74479922 -29015052 + (TC)n Simple_repeat Simple_repeat 2 63 0 5 1153 1145 75 0 20 chr15 74479922 74480072 -29014902 - B1_Mus2 SINE Alu 0 147 1 5 1153 279 279 16 98 chr15 74480072 74480084 -29014890 - MT2B LTR ERVL -433 168 159 4 1153 1666 169 119 9 chr15 74480084 74480419 -29014555 - ORR1D1 LTR MaLR -2 372 1 5 1153 5806 206 61 63 chr15 74480419 74481302 -29013672 - ORR1D1-int LTR MaLR 0 1370 512 5 1153 498 17 0 0 chr15 74481302 74481361 -29013613 + (TC)n Simple_repeat Simple_repeat 1 59 0 5 1153 5806 206 61 63 chr15 74481361 74481849 -29013125 - ORR1D1-int LTR MaLR -859 511 2 5 1153 279 279 16 98 chr15 74481849 74481862 -29013112 - MT2B LTR ERVL -443 158 148 4 1153 866 183 57 6 chr15 74481862 74482025 -29012949 - ORR1D1 LTR MaLR 0 374 190 5 1153 984 221 16 0 chr15 74482517 74482707 -29012267 - ORR1D1 LTR MaLR -181 193 1 5 1153 4166 164 13 6 chr15 74482729 74483415 -29011559 - RLTR17 LTR ERVK -1 691 1 5 1153 362 331 85 12 chr15 74483473 74483638 -29011336 - MER52-int LTR ERV1 -3547 3544 3368 4 1153 183 122 0 58 chr15 74484312 74484364 -29010610 + CT-rich Low_complexity Low_complexity 2 50 0 5 1153 193 117 66 16 chr15 74485730 74485791 -29009183 + CT-rich Low_complexity Low_complexity 5 68 0 5 1153 1754 241 62 15 chr15 74485927 74486327 -29008647 + MTD LTR MaLR 1 419 0 5 1153 214 186 0 0 chr15 74486379 74486422 -29008552 + A-rich Low_complexity Low_complexity 1 43 0 5 1153 1459 216 105 14 chr15 74486883 74487254 -29007720 + MTD LTR MaLR 1 405 -14 5 1153 329 284 0 13 chr15 74487244 74487264 -29007710 - B3 SINE B2 -142 74 55 5 1153 893 116 0 0 chr15 74487264 74487393 -29007581 + B1_Mus2 SINE Alu 3 131 -16 5 1153 329 284 0 13 chr15 74487393 74487447 -29007527 - B3 SINE B2 -162 54 1 5 1153 246 213 15 62 chr15 74487447 74487506 -29007468 - RMER5 LTR ERV1 -478 56 1 5 1153 811 169 14 7 chr15 74487672 74487802 -29007172 + B1_Mus1 SINE Alu 5 136 -12 5 1153 197 0 0 67 chr15 74487802 74487832 -29007142 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1153 811 169 14 7 chr15 74487832 74487844 -29007130 + B1_Mus1 SINE Alu 137 148 0 5 1153 2254 145 50 100 chr15 74488513 74489051 -29005923 + RLTR24 LTR ERV1 19 529 0 5 1153 375 78 0 0 chr15 74490502 74490553 -29004421 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1153 218 185 31 0 chr15 74493338 74493403 -29001571 + (CAGAGA)n Simple_repeat Simple_repeat 4 70 0 5 1153 459 0 0 0 chr15 74498618 74498669 -28996305 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1153 420 20 0 0 chr15 74498669 74498717 -28996257 + (GA)n Simple_repeat Simple_repeat 1 49 0 5 1153 226 227 0 0 chr15 74499163 74499207 -28995767 - MIR SINE MIR -63 145 102 5 1153 396 0 0 0 chr15 74503498 74503542 -28991432 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1153 211 158 53 0 chr15 74503864 74503902 -28991072 + polypurine Low_complexity Low_complexity 2 41 0 2 1153 217 146 24 0 chr15 74505484 74505525 -28989449 + (GGGTG)n Simple_repeat Simple_repeat 5 46 0 3 1153 181 340 0 0 chr15 74507177 74507227 -28987747 - MIRc SINE MIR -51 217 168 4 1153 243 0 0 0 chr15 74507415 74507442 -28987532 + (TTCC)n Simple_repeat Simple_repeat 4 30 0 5 1153 213 39 0 0 chr15 74508400 74508426 -28986548 + (TCC)n Simple_repeat Simple_repeat 1 26 0 6 1153 1124 109 0 6 chr15 74508427 74508603 -28986371 + (TTC)n Simple_repeat Simple_repeat 1 175 0 7 1153 243 103 0 0 chr15 74510802 74510841 -28984133 + (T)n Simple_repeat Simple_repeat 1 39 0 8 1153 1149 55 7 14 chr15 74510844 74510992 -28983982 - B1_Mus2 SINE Alu 0 147 1 9 1153 288 170 0 0 chr15 74511899 74511952 -28983022 + CT-rich Low_complexity Low_complexity 2 54 0 1 1153 322 321 29 47 chr15 74513470 74513729 -28981245 + HAL1-2a_MD LINE L1 2347 2496 -528 1 1153 286 300 110 50 chr15 74515090 74515290 -28979684 - MLT1F1 LTR MaLR -357 212 1 1 1153 401 0 20 0 chr15 74515344 74515393 -28979581 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1153 951 264 46 17 chr15 74516873 74517112 -28977862 - RMER1C Other Other -511 831 586 1 1153 4370 89 28 39 chr15 74518337 74519082 -28975892 - RMER17A LTR ERVK -14 737 1 1 1153 23 33 0 0 chr15 74519276 74519306 -28975668 + AT_rich Low_complexity Low_complexity 1 30 0 1 1153 1162 71 135 0 chr15 74519369 74519539 -28975435 + B2_Mm2 SINE B2 3 195 0 1 1153 1194 69 0 0 chr15 74519827 74519972 -28975002 - B1_Mm SINE Alu 0 147 3 1 1153 212 342 26 26 chr15 74521068 74521146 -28973828 + ID4_ SINE ID 6 83 0 1 1153 588 272 50 35 chr15 74521479 74521681 -28973293 + B3 SINE B2 10 214 -2 2 1153 26 30 0 0 chr15 74522388 74522421 -28972553 + AT_rich Low_complexity Low_complexity 1 33 0 2 1153 952 156 49 22 chr15 74522808 74522991 -28971983 + B2_Mm2 SINE B2 2 189 -6 2 1153 29 0 0 0 chr15 74524835 74524864 -28970110 + AT_rich Low_complexity Low_complexity 1 29 0 2 1153 2280 331 70 41 chr15 74525960 74527198 -28967776 - Lx9 LINE L1 -31 7613 6341 2 1153 247 258 84 21 chr15 74527255 74527350 -28967624 - PB1D10 SINE Alu -5 112 12 2 1153 1149 68 0 20 chr15 74527644 74527794 -28967180 + B1_Mus1 SINE Alu 2 148 0 2 1153 311 65 22 0 chr15 74527794 74527840 -28967134 + (GAAAA)n Simple_repeat Simple_repeat 4 50 0 2 1153 959 90 7 0 chr15 74527841 74527985 -28966989 + (GA)n Simple_repeat Simple_repeat 2 146 0 2 1153 213 121 0 0 chr15 74528148 74528181 -28966793 + (TGG)n Simple_repeat Simple_repeat 3 35 0 2 1153 2018 108 22 9 chr15 74528690 74529007 -28965967 - ORR1A4 LTR MaLR -8 321 1 3 1153 331 259 41 12 chr15 74530142 74530396 -28964578 + (TGGA)n Simple_repeat Simple_repeat 1 261 0 3 1153 267 275 45 28 chr15 74530416 74530592 -28964382 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 3 1153 284 319 66 54 chr15 74531002 74531168 -28963806 + LTR33A LTR ERVL 81 248 -272 3 1153 340 307 34 0 chr15 74534382 74534470 -28960504 + PB1D10 SINE Alu 1 91 -26 3 1153 4048 342 50 1 chr15 74536312 74537864 -28957110 - Tigger10 DNA Tigger -121 1722 95 3 1153 204 40 0 0 chr15 74538380 74538405 -28956569 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1153 396 261 33 0 chr15 74539023 74539115 -28955859 + B1F SINE Alu 9 103 -46 3 1153 393 309 196 14 chr15 74540316 74540602 -28954372 + MLT1D LTR MaLR 159 496 -9 3 1153 214 343 201 25 chr15 74540696 74541049 -28953925 + L2 LINE L2 2258 2672 -747 3 1153 229 289 166 21 chr15 74543081 74543226 -28951748 - MER20 DNA MER1_type -51 168 3 3 1153 232 250 28 42 chr15 74543523 74543594 -28951380 + MIR SINE MIR 82 151 -57 4 1153 284 64 21 0 chr15 74544008 74544055 -28950919 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 4 1153 195 42 0 0 chr15 74544055 74544079 -28950895 + (CCA)n Simple_repeat Simple_repeat 1 24 0 4 1153 249 307 100 82 chr15 74544100 74544320 -28950654 - LTR33 LTR ERVL -161 354 131 4 1153 712 203 38 0 chr15 74547849 74547982 -28946992 + B1_Mur1 SINE Alu 1 138 -11 4 1153 248 70 0 23 chr15 74547982 74548026 -28946948 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1153 1120 56 35 0 chr15 74548096 74548238 -28946736 + B1_Mus2 SINE Alu 1 147 0 4 1153 387 0 0 0 chr15 74549177 74549220 -28945754 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1153 254 148 19 0 chr15 74554662 74554716 -28940258 + C-rich Low_complexity Low_complexity 6 60 0 4 1153 588 53 0 0 chr15 74559328 74559404 -28935570 + (GGGA)n Simple_repeat Simple_repeat 3 78 0 4 1153 199 157 39 0 chr15 74559417 74559468 -28935506 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 5 1153 186 274 82 0 chr15 74560589 74560662 -28934312 + MIRm SINE MIR 85 163 -113 5 1153 424 301 22 17 chr15 74561289 74561468 -28933506 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 5 1153 573 218 0 9 chr15 74561500 74561611 -28933363 + ID_B1 SINE B4 115 224 0 5 1153 283 331 0 91 chr15 74561876 74562019 -28932955 + Lx8 LINE L1 7281 7410 -63 5 1153 585 192 0 0 chr15 74563774 74563894 -28931080 + (CA)n Simple_repeat Simple_repeat 2 121 0 5 1153 591 169 209 0 chr15 74565530 74565678 -28929296 + URR1B DNA MER1_type 1 179 -46 5 1153 345 62 0 0 chr15 74565678 74565726 -28929248 + (TCTG)n Simple_repeat Simple_repeat 2 49 0 5 1153 564 15 0 0 chr15 74565729 74565794 -28929180 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1153 260 263 96 41 chr15 74566178 74566333 -28928641 - MIRc SINE MIR -37 231 72 5 1153 257 350 110 11 chr15 74568060 74568242 -28926732 + MER110A LTR ERV1 2 201 -267 6 1153 366 322 0 20 chr15 74568898 74568916 -28926058 - ID_B1 SINE B4 0 224 82 6 1153 662 197 8 8 chr15 74568916 74569044 -28925930 - B1_Mus1 SINE Alu -20 128 1 6 1153 369 225 79 0 chr15 74569127 74569216 -28925758 + B1F1 SINE Alu 2 97 -52 6 1153 1282 261 89 26 chr15 74569372 74569754 -28925220 + MER21B LTR ERV1 2 407 -456 6 1153 1249 48 0 0 chr15 74569813 74569960 -28925014 + B1_Mus1 SINE Alu 1 147 -1 6 1153 1172 114 42 42 chr15 74569977 74570169 -28924805 + B2_Mm2 SINE B2 2 193 -2 6 1153 405 331 15 0 chr15 74570212 74570348 -28924626 + MER21B LTR ERV1 625 762 -101 6 1153 256 314 16 47 chr15 74570375 74570502 -28924472 + MER65D LTR ERV1 4 126 -347 6 1153 308 365 117 16 chr15 74570971 74571219 -28923755 - L1MB5 LINE L1 -311 5863 5591 6 1153 207 185 58 65 chr15 74572411 74572550 -28922424 + (CCCCAG)n Simple_repeat Simple_repeat 1 138 0 6 1153 210 262 24 36 chr15 74574504 74574587 -28920387 + CT-rich Low_complexity Low_complexity 2 83 0 7 1153 212 326 36 3 chr15 74579373 74579465 -28915509 + MIR SINE MIR 101 192 -76 7 1154 258 121 82 49 chr15 74584103 74584164 -28910810 + 4.5SRNA scRNA scRNA 24 86 -8 7 1154 672 128 0 35 chr15 74584112 74584225 -28910749 + B1_Mur4 SINE Alu 41 149 -1 7 1154 556 241 216 10 chr15 74584317 74584632 -28910342 + ORR1D1 LTR MaLR 1 392 -2 7 1154 9263 43 2 7 chr15 74584632 74585864 -28909110 - L1Md_F3 LINE L1 -1330 4553 3328 7 1154 8287 52 1 0 chr15 74585864 74586930 -28908044 + L1Md_F3 LINE L1 4520 5586 -297 7 1154 8299 45 1 6 chr15 74586930 74587933 -28907041 + L1Md_F3 LINE L1 5587 6584 0 7 1154 1297 264 20 17 chr15 74587933 74587975 -28906999 + L1MD LINE L1 5616 5659 -2336 7 1154 1080 153 11 11 chr15 74588005 74588164 -28906810 + B2_Mm2 SINE B2 3 161 -34 7 1154 429 20 0 0 chr15 74588164 74588214 -28906760 + (TAAA)n Simple_repeat Simple_repeat 1 50 0 7 1154 1080 153 11 11 chr15 74588214 74588245 -28906729 + B2_Mm2 SINE B2 162 193 -2 7 1154 467 273 64 7 chr15 74588381 74588521 -28906453 + RSINE1 SINE B4 2 149 -16 7 1154 334 324 106 51 chr15 74588544 74588781 -28906193 + L1M4 LINE L1 2771 3020 -3126 8 1154 355 207 56 33 chr15 74588881 74588971 -28906003 + B4A SINE B4 2 93 -199 8 1154 446 324 21 52 chr15 74589122 74589314 -28905660 + B4A SINE B4 84 269 -23 8 1154 408 125 0 0 chr15 74589314 74589378 -28905596 + (CA)n Simple_repeat Simple_repeat 2 65 0 8 1154 540 0 0 0 chr15 74589966 74590026 -28904948 + (CA)n Simple_repeat Simple_repeat 2 61 0 8 1154 1173 67 111 41 chr15 74590291 74590463 -28904511 - B2_Mm2 SINE B2 -11 184 1 8 1154 397 305 17 17 chr15 74590683 74590803 -28904171 + RMER15 LTR ERVL 339 458 -117 8 1154 357 24 0 0 chr15 74596087 74596129 -28898845 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 8 1154 412 271 47 12 chr15 74596867 74597039 -28897935 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 8 1154 460 234 14 0 chr15 74597086 74597227 -28897747 + (TCCA)n Simple_repeat Simple_repeat 2 144 0 8 1154 261 263 14 7 chr15 74597208 74597346 -28897628 + (TCTA)n Simple_repeat Simple_repeat 2 140 0 9 1154 230 261 23 23 chr15 74598971 74599104 -28895870 + (TCCA)n Simple_repeat Simple_repeat 3 135 0 9 1154 189 0 0 0 chr15 74599442 74599463 -28895511 + (TC)n Simple_repeat Simple_repeat 2 22 0 9 1154 186 43 0 0 chr15 74599463 74599485 -28895489 + (TG)n Simple_repeat Simple_repeat 2 24 0 9 1154 1129 296 47 33 chr15 74600811 74600972 -28894002 + MTE2b LTR MaLR 5 175 -204 9 1154 1066 201 19 14 chr15 74600972 74601179 -28893795 + B3 SINE B2 3 210 -6 9 1154 1129 296 47 33 chr15 74601179 74601377 -28893597 + MTE2b LTR MaLR 176 369 -10 9 1154 210 116 22 65 chr15 74603082 74603128 -28891846 + CT-rich Low_complexity Low_complexity 2 45 0 9 1154 1188 239 6 7 chr15 74606317 74607028 -28887946 + (TGGA)n Simple_repeat Simple_repeat 1 710 0 9 1154 198 103 0 0 chr15 74608768 74608797 -28886177 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 9 1154 312 291 120 14 chr15 74613284 74613506 -28881468 - L1MB7 LINE L1 -151 6029 5775 9 1154 212 262 0 0 chr15 74613584 74613626 -28881348 + B1F SINE Alu 3 44 -105 1 1154 229 288 91 0 chr15 74613654 74613720 -28881254 + ID4_ SINE ID 11 82 -1 1 1154 216 0 0 0 chr15 74613724 74613748 -28881226 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 1 1154 405 294 149 48 chr15 74613748 74614411 -28880563 + L1MC3 LINE L1 7049 7995 0 1 1154 226 238 0 0 chr15 74615475 74615517 -28879457 - MTE2a LTR MaLR -49 330 289 1 1154 243 0 0 0 chr15 74615572 74615599 -28879375 + (TTCC)n Simple_repeat Simple_repeat 1 27 0 1 1154 765 208 0 0 chr15 74615599 74615767 -28879207 + CT-rich Low_complexity Low_complexity 1 168 0 1 1154 1014 9 0 0 chr15 74616109 74616224 -28878750 + (TC)n Simple_repeat Simple_repeat 1 115 0 1 1154 386 324 67 137 chr15 74616406 74616792 -28878182 - ORR1E LTR MaLR 0 359 1 1 1154 494 232 143 63 chr15 74617217 74617392 -28877582 - B3A SINE B2 -7 191 3 1 1154 766 286 31 9 chr15 74617397 74617619 -28877355 - B4A SINE B4 -65 227 1 1 1154 270 0 0 0 chr15 74617651 74617681 -28877293 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 1 1154 1883 210 40 15 chr15 74617747 74618143 -28876831 - MTD LTR MaLR -13 406 1 1 1154 474 309 50 58 chr15 74618758 74618986 -28875988 - L1M5 LINE L1 -548 5811 5592 1 1154 241 347 32 0 chr15 74619109 74619204 -28875770 - L1M5 LINE L1 -3637 2509 2412 1 1154 216 0 0 0 chr15 74620084 74620108 -28874866 + (TGG)n Simple_repeat Simple_repeat 3 26 0 1 1154 794 248 93 78 chr15 74620122 74620380 -28874594 - B4A SINE B4 -4 288 27 1 1154 195 69 0 0 chr15 74620399 74620428 -28874546 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1154 1711 197 47 60 chr15 74620428 74620812 -28874162 + MTD LTR MaLR 26 404 -15 1 1154 4072 111 93 70 chr15 74621081 74621768 -28873206 - RMER6A LTR ERVK 0 756 59 1 1154 270 0 0 0 chr15 74621768 74621798 -28873176 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 1154 4072 111 93 70 chr15 74621798 74621849 -28873125 - RMER6A LTR ERVK -698 58 3 1 1154 632 286 156 95 chr15 74622093 74622410 -28872564 + MLT1A0 LTR MaLR 1 366 -42 1 1154 797 170 7 45 chr15 74622410 74622564 -28872410 + B1_Mur4 SINE Alu 1 148 -2 1 1154 604 286 156 95 chr15 74622564 74622625 -28872349 + MLT1A0 LTR MaLR 367 402 -6 1 1154 388 344 41 36 chr15 74622695 74622891 -28872083 - L1M5 LINE L1 -1991 4155 3959 1 1154 671 213 28 56 chr15 74622943 74623042 -28871932 - B1_Mur1 SINE Alu -1 148 46 1 1154 1674 179 76 22 chr15 74623042 74623397 -28871577 - ORR1D1 LTR MaLR 0 374 1 1 1154 671 213 28 56 chr15 74623397 74623441 -28871533 - B1_Mur1 SINE Alu -104 45 9 1 1154 343 242 346 13 chr15 74623494 74623653 -28871321 - B3 SINE B2 -2 214 3 1 1154 230 184 204 0 chr15 74624401 74624450 -28870524 - ID4_ SINE ID -1 82 24 1 1154 410 0 20 0 chr15 74624488 74624538 -28870436 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1154 1133 265 50 29 chr15 74624681 74624961 -28870013 - MTE2b LTR MaLR -93 286 1 1 1154 326 326 35 0 chr15 74625337 74625423 -28869551 + B1F SINE Alu 45 133 -16 1 1154 283 284 55 33 chr15 74625342 74625433 -28869541 + ID_B1 SINE B4 128 220 -4 1 1154 340 62 22 0 chr15 74625819 74625870 -28869104 - MTD LTR MaLR -327 92 41 1 1154 183 156 0 0 chr15 74626336 74626368 -28868606 + A-rich Low_complexity Low_complexity 1 32 0 1 1154 815 66 9 0 chr15 74626595 74626701 -28868273 - B2_Mm1t SINE B2 -85 108 2 1 1154 2775 34 0 0 chr15 74626893 74627219 -28867755 + IAPEY2_LTR LTR ERVK 32 357 0 1 1154 246 217 24 12 chr15 74628391 74628475 -28866499 + (TA)n Simple_repeat Simple_repeat 2 86 0 1 1154 234 143 28 14 chr15 74628608 74628654 -28866320 + (TTTG)n Simple_repeat Simple_repeat 1 45 0 1 1154 1393 74 26 0 chr15 74628654 74628843 -28866131 - B2_Mm2 SINE B2 -1 194 1 1 1154 234 143 28 14 chr15 74628843 74628867 -28866107 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1 1154 23 0 0 0 chr15 74630735 74630758 -28864216 + AT_rich Low_complexity Low_complexity 1 23 0 1 1154 196 259 148 0 chr15 74630937 74630991 -28863983 + L3 LINE CR1 3429 3490 -999 1 1154 549 310 66 9 chr15 74631316 74631531 -28863443 - MLT1A0 LTR MaLR 0 408 162 1 1154 243 0 0 0 chr15 74631603 74631630 -28863344 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 1154 207 0 0 0 chr15 74631630 74631652 -28863322 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1154 1497 178 103 46 chr15 74631671 74631871 -28863103 - RMER17C LTR ERVK 0 410 185 1 1154 871 21 7 54 chr15 74631871 74632020 -28862954 + (GAGAA)n Simple_repeat Simple_repeat 5 146 0 1 1154 1497 178 103 46 chr15 74632020 74632207 -28862767 - RMER17C LTR ERVK -226 184 1 1 1154 3787 105 21 16 chr15 74632706 74633267 -28861707 + LTRIS2 LTR ERV1 1 564 0 1 1154 2323 144 185 9 chr15 74633295 74633744 -28861230 + RLTR11A LTR ERVK 1 528 0 1 1154 255 61 0 0 chr15 74634330 74634363 -28860611 + (TGGGGG)n Simple_repeat Simple_repeat 2 34 0 1 1154 1024 74 6 33 chr15 74634636 74634817 -28860157 + (TCTA)n Simple_repeat Simple_repeat 3 178 0 1 1154 1492 211 68 6 chr15 74635440 74635792 -28859182 + ORR1D1 LTR MaLR 1 374 0 1 1154 2676 162 82 4 chr15 74636282 74636353 -28858621 - RLTR11A LTR ERVK 0 528 457 1 1154 369 0 0 0 chr15 74636353 74636394 -28858580 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1154 2676 162 82 4 chr15 74636394 74636812 -28858162 - RLTR11A LTR ERVK -72 456 3 1 1154 859 249 18 60 chr15 74637232 74637450 -28857524 + B3 SINE B2 6 214 -2 1 1154 279 287 146 23 chr15 74637552 74637723 -28857251 + L1_Rod LINE L1 120 311 -6861 1 1154 5155 216 54 15 chr15 74637738 74638461 -28856513 + L1_Rod LINE L1 527 1438 -4409 1 1154 552 15 0 0 chr15 74638461 74638526 -28856448 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 1154 399 41 0 0 chr15 74638526 74638574 -28856400 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 1154 5155 219 59 24 chr15 74638574 74639633 -28855341 + L1_Rod LINE L1 1439 2518 -3329 1 1154 336 48 0 0 chr15 74639633 74639675 -28855299 + (TAA)n Simple_repeat Simple_repeat 3 44 0 1 1154 5155 219 59 24 chr15 74639675 74639804 -28855170 + L1_Rod LINE L1 2519 2665 -3182 1 1154 542 239 0 6 chr15 74639804 74639981 -28854993 + (CA)n Simple_repeat Simple_repeat 2 177 0 1 1154 917 231 23 83 chr15 74639985 74640335 -28854639 + L1_Rod LINE L1 2679 3007 -2840 1 1154 7850 168 75 42 chr15 74640571 74642338 -28852636 + RLTR22_Mur LTR ERVK 1 1825 -23 1 1154 522 0 0 0 chr15 74642438 74642496 -28852478 + (TC)n Simple_repeat Simple_repeat 2 59 0 1 1154 224 59 29 0 chr15 74642499 74642533 -28852441 + (TCTG)n Simple_repeat Simple_repeat 4 38 0 1 1154 380 323 47 77 chr15 74642576 74642811 -28852163 + L1MB8 LINE L1 5934 6161 -17 1 1154 271 299 85 23 chr15 74643040 74643170 -28851804 + MLT2C2 LTR ERVL 122 259 -205 1 1154 453 154 0 0 chr15 74644927 74645018 -28849956 + (CTG)n Simple_repeat Simple_repeat 2 92 0 1 1154 1219 190 103 98 chr15 74646069 74646436 -28848538 + ORR1D1 LTR MaLR 1 369 -5 1 1154 723 95 0 0 chr15 74648608 74648713 -28846261 + (TC)n Simple_repeat Simple_repeat 1 105 0 1 1154 432 130 0 0 chr15 74649948 74650017 -28844957 + (GA)n Simple_repeat Simple_repeat 1 69 0 1 1154 1204 193 104 88 chr15 74652184 74652548 -28842426 - ORR1D1 LTR MaLR -4 370 1 1 1154 453 154 0 0 chr15 74653599 74653690 -28841284 + (CAG)n Simple_repeat Simple_repeat 2 92 0 1 1154 2788 34 0 0 chr15 74655501 74655823 -28839151 - RLTRETN_Mm LTR ERVK 0 322 1 1 1154 13423 45 12 8 chr15 74655823 74657463 -28837511 - MMETn-int LTR ERVK 0 4844 3199 1 1154 20729 29 4 12 chr15 74657444 74659927 -28835047 - MMETn-int LTR ERVK -2379 2465 1 1 1154 2748 31 9 0 chr15 74659927 74660246 -28834728 - RLTRETN_Mm LTR ERVK 0 322 1 1 1154 271 299 85 23 chr15 74660333 74660463 -28834511 - MLT2C2 LTR ERVL -205 259 122 1 1154 406 323 47 71 chr15 74660692 74660945 -28834029 - L1MB8 LINE L1 -17 6161 5915 1 1154 218 95 24 0 chr15 74661314 74661356 -28833618 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 1 1154 348 114 0 37 chr15 74661366 74661400 -28833574 + polypurine Low_complexity Low_complexity 1 34 0 1 1154 970 39 0 62 chr15 74661400 74661592 -28833382 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 1 1154 348 114 0 37 chr15 74661592 74661639 -28833335 + polypurine Low_complexity Low_complexity 35 78 0 1 1154 958 57 0 64 chr15 74661639 74661827 -28833147 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 1 1154 1827 213 48 46 chr15 74661977 74662434 -28832540 - RMER5 LTR ERV1 -9 525 68 1 1154 465 19 0 0 chr15 74662450 74662504 -28832470 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1154 691 219 169 0 chr15 74662534 74662694 -28832280 - B3 SINE B2 -29 187 1 1 1154 882 128 8 8 chr15 74662915 74663049 -28831925 + B1_Mus1 SINE Alu 5 138 -10 1 1154 589 13 0 25 chr15 74663049 74663129 -28831845 + (CAAAA)n Simple_repeat Simple_repeat 2 79 0 1 1154 23 0 0 0 chr15 74663420 74663443 -28831531 + AT_rich Low_complexity Low_complexity 1 23 0 1 1154 800 264 30 15 chr15 74663830 74664030 -28830944 - B3 SINE B2 -5 211 9 1 1154 384 268 21 0 chr15 74664409 74664506 -28830468 + B4A SINE B4 2 100 -192 1 1154 410 310 10 0 chr15 74664537 74664637 -28830337 + B4A SINE B4 183 283 -9 1 1154 231 218 0 52 chr15 74664698 74664756 -28830218 - L1MD3 LINE L1 -196 7799 7745 1 1154 315 0 0 0 chr15 74664850 74664885 -28830089 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 1154 333 0 0 0 chr15 74664885 74664921 -28830053 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1154 523 278 76 107 chr15 74664991 74665188 -28829786 - B3A SINE B2 -3 192 2 1 1154 875 130 0 7 chr15 74667875 74668022 -28826952 + (TC)n Simple_repeat Simple_repeat 1 146 0 1 1154 462 301 22 22 chr15 74672530 74672669 -28822305 + B4A SINE B4 42 180 -112 1 1154 295 268 118 26 chr15 74672684 74672837 -28822137 - RLTR21 LTR ERVK -318 1254 1088 1 1154 344 188 14 0 chr15 74672879 74672948 -28822026 - B1_Mus2 SINE Alu -2 145 76 1 1154 3542 294 79 59 chr15 74674082 74674719 -28820255 + ORR1E-int LTR MaLR 192 809 -771 1 1154 2326 93 19 12 chr15 74674719 74675044 -28819930 + ORR1A2 LTR MaLR 1 327 0 1 1154 3542 294 79 59 chr15 74675044 74675480 -28819494 + ORR1E-int LTR MaLR 810 1283 -297 1 1154 1041 244 66 109 chr15 74675480 74675876 -28819098 + MTE2a LTR MaLR 1 379 0 1 1154 3542 294 79 59 chr15 74675876 74676111 -28818863 + ORR1E-int LTR MaLR 1284 1527 -53 1 1154 976 294 13 95 chr15 74676111 74676409 -28818565 + ORR1E LTR MaLR 1 271 -88 1 1154 1104 224 40 152 chr15 74676409 74676836 -28818138 + MTE2a LTR MaLR 1 379 0 1 1154 976 294 13 95 chr15 74676836 74676928 -28818046 + ORR1E LTR MaLR 272 359 0 1 1154 6466 98 29 2 chr15 74677176 74678104 -28816870 + Lx3C LINE L1 6022 6974 -2 1 1154 1274 94 22 6 chr15 74678108 74678289 -28816685 - B2_Mm2 SINE B2 -10 185 2 2 1154 275 287 83 0 chr15 74678351 74678459 -28816515 - L1MA8 LINE L1 -387 5904 5788 2 1154 783 167 0 80 chr15 74678472 74678486 -28816488 - B1_Mur4 SINE Alu 0 150 143 2 1154 198 0 0 0 chr15 74678486 74678508 -28816466 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 2 1154 783 167 0 80 chr15 74678508 74678656 -28816318 - B1_Mur4 SINE Alu -8 142 1 2 1154 681 262 130 26 chr15 74678678 74679093 -28815881 - L1MA8 LINE L1 -548 5743 5286 2 1154 333 244 11 11 chr15 74679093 74679180 -28815794 + ORR1E LTR MaLR 41 127 -232 2 1154 400 313 78 37 chr15 74679540 74679782 -28815192 + L1M2 LINE L1 2754 3005 -3138 2 1154 392 258 108 44 chr15 74680135 74680338 -28814636 - MLT1B LTR MaLR -8 382 167 2 1154 640 69 75 10 chr15 74680768 74681071 -28813903 + (TCTA)n Simple_repeat Simple_repeat 1 322 0 2 1154 204 40 0 0 chr15 74681595 74681620 -28813354 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 1154 366 287 67 40 chr15 74687753 74687902 -28807072 + RMER15 LTR ERVL 381 533 -42 2 1154 292 316 142 7 chr15 74688183 74688492 -28806482 - L1MC1 LINE L1 -45 6463 6113 2 1154 664 212 8 4 chr15 74688497 74688762 -28806212 + (TG)n Simple_repeat Simple_repeat 1 266 0 2 1154 853 291 14 46 chr15 74688781 74688997 -28805977 - B4 SINE B4 0 292 84 2 1154 490 207 0 0 chr15 74689177 74689264 -28805710 - B3A SINE B2 -109 89 3 2 1154 295 281 53 53 chr15 74689266 74689360 -28805614 - B4 SINE B4 -197 95 2 2 1154 342 307 208 5 chr15 74689511 74689727 -28805247 - L1MC1 LINE L1 -2270 5947 5688 2 1154 1872 199 109 17 chr15 74689764 74690169 -28804805 - RMER13A LTR ERVK -273 587 146 2 1154 1070 224 55 4 chr15 74690140 74690395 -28804579 - B4A SINE B4 -24 268 1 2 1154 290 291 134 38 chr15 74690413 74690652 -28804322 - L1MC1 LINE L1 -4863 1645 1384 2 1154 926 157 7 7 chr15 74690705 74690853 -28804121 - B1_Mus1 SINE Alu 0 148 1 2 1154 455 271 133 62 chr15 74690948 74691258 -28803716 - ORR1D2 LTR MaLR -1 369 31 2 1154 222 37 0 0 chr15 74691458 74691485 -28803489 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1154 3383 78 50 2 chr15 74691493 74691953 -28803021 + RLTR45 LTR ERVK 1 482 0 2 1154 26925 68 31 21 chr15 74691953 74694217 -28800757 + RLTR45-int LTR ERVK 1 2303 -4941 2 1154 234 0 0 0 chr15 74694217 74694243 -28800731 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 2 1154 26925 68 31 21 chr15 74694243 74695607 -28799367 + RLTR45-int LTR ERVK 2304 3665 -3579 2 1154 337 275 0 0 chr15 74695599 74695668 -28799306 + RMER16-int LTR ERVK 1565 1633 -3773 2 1154 21 57 0 0 chr15 74695668 74695703 -28799271 + AT_rich Low_complexity Low_complexity 1 35 0 2 1154 29667 39 9 10 chr15 74695716 74696847 -28798127 + RLTR45-int LTR ERVK 3651 4745 -2499 2 1154 348 83 0 0 chr15 74696847 74696895 -28798079 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 2 1154 29667 39 9 10 chr15 74696895 74698414 -28796560 + RLTR45-int LTR ERVK 4746 6284 -960 2 1154 396 0 0 0 chr15 74698414 74698458 -28796516 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1154 29667 39 9 10 chr15 74698458 74699403 -28795571 + RLTR45-int LTR ERVK 6285 7242 -2 2 1154 3689 68 19 0 chr15 74699403 74699876 -28795098 + RLTR45 LTR ERVK 1 482 0 2 1154 550 259 55 34 chr15 74699880 74700050 -28794924 + B3A SINE B2 38 199 -17 2 1154 522 207 0 0 chr15 74700079 74700258 -28794716 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 1154 2100 139 22 36 chr15 74700274 74700633 -28794341 + ORR1B1 LTR MaLR 41 394 0 2 1154 23 0 0 0 chr15 74700641 74700664 -28794310 + AT_rich Low_complexity Low_complexity 1 23 0 2 1154 552 301 34 14 chr15 74700790 74700938 -28794036 - RSINE1 SINE B4 0 165 15 2 1154 1187 111 48 27 chr15 74700939 74701125 -28793849 + RLTR24 LTR ERV1 1 190 -339 2 1154 1334 60 12 0 chr15 74701132 74701300 -28793674 + B2_Mm2 SINE B2 2 171 -24 2 1154 1220 61 0 0 chr15 74701306 74701454 -28793520 + B1_Mus1 SINE Alu 1 148 0 2 1154 206 32 0 31 chr15 74701457 74701489 -28793485 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1154 1835 169 47 82 chr15 74701496 74701543 -28793431 + RLTR24 LTR ERV1 166 194 -335 2 1154 5737 29 1 0 chr15 74701543 74702200 -28792774 + L1Md_F2 LINE L1 5924 6581 -1 2 1154 1835 149 55 107 chr15 74702200 74702547 -28792427 + RLTR24 LTR ERV1 195 529 0 2 1154 273 252 57 121 chr15 74702562 74702609 -28792365 - B2_Mm2 SINE B2 -9 186 138 2 1154 489 17 0 0 chr15 74702609 74702667 -28792307 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1154 337 252 57 121 chr15 74702667 74702759 -28792215 - B3 SINE B2 -63 153 56 2 1154 186 43 0 0 chr15 74702847 74702870 -28792104 + (CTG)n Simple_repeat Simple_repeat 2 24 0 2 1154 576 285 107 8 chr15 74702878 74703113 -28791861 - Lx8 LINE L1 -1128 6516 6173 2 1154 610 225 163 11 chr15 74703284 74703468 -28791506 - MTD LTR MaLR -2 417 206 2 1154 237 33 0 0 chr15 74703945 74703975 -28790999 + (AGGGGG)n Simple_repeat Simple_repeat 1 30 0 2 1154 2557 107 29 11 chr15 74704614 74704993 -28789981 - ORR1B1 LTR MaLR -8 386 1 2 1154 542 262 103 0 chr15 74704994 74705120 -28789854 + B1F SINE Alu 11 149 0 2 1154 225 0 0 0 chr15 74705120 74705145 -28789829 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1154 358 276 51 17 chr15 74706526 74706644 -28788330 + Tigger5 DNA MER2_type 2131 2252 -154 2 1154 341 216 18 110 chr15 74707439 74707548 -28787426 - ID_B1 SINE B4 0 224 126 2 1154 225 330 45 36 chr15 74707642 74707752 -28787222 - MIRm SINE MIR -92 184 74 2 1154 4138 70 13 2 chr15 74708217 74708748 -28786226 + L1Md_F2 LINE L1 6046 6582 0 2 1154 351 0 0 0 chr15 74709948 74709987 -28784987 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1154 731 110 14 16 chr15 74709987 74710120 -28784854 - B1_Mus2 SINE Alu -9 140 12 2 1155 680 252 32 32 chr15 74711531 74711690 -28783284 + RSINE1 SINE B4 6 165 0 2 1155 311 188 159 56 chr15 74711690 74711797 -28783177 + HAL1-3A_ME LINE L1 2670 2787 -71 2 1155 1241 268 29 4 chr15 74713776 74713989 -28780985 + B4 SINE B4 3 216 -76 2 1155 567 29 0 0 chr15 74713989 74714058 -28780916 + (GA)n Simple_repeat Simple_repeat 2 70 0 2 1155 1241 268 29 4 chr15 74714058 74714121 -28780853 + B4 SINE B4 217 284 -8 2 1155 528 16 0 0 chr15 74714159 74714220 -28780754 + (GA)n Simple_repeat Simple_repeat 2 62 0 2 1155 296 271 138 15 chr15 74714799 74714933 -28780041 - PB1D7 SINE Alu -9 140 5 2 1155 325 287 0 0 chr15 74714849 74714936 -28780038 - ID_B1 SINE B4 -55 169 83 2 1155 651 284 89 18 chr15 74714961 74715206 -28779768 - L1MB3 LINE L1 -2 6181 5912 2 1155 599 305 74 0 chr15 74715206 74715396 -28779578 - ID_B1 SINE B4 -17 207 4 2 1155 651 284 89 18 chr15 74715396 74715476 -28779498 - L1MB3 LINE L1 -272 5911 5834 2 1155 283 277 31 0 chr15 74715712 74715777 -28779197 + tRNA-Ala-GCY_ tRNA tRNA 1 67 -8 2 1155 550 140 59 4 chr15 74715777 74716024 -28778950 + (TAGA)n Simple_repeat Simple_repeat 1 260 0 2 1155 681 103 56 0 chr15 74716051 74716158 -28778816 - URR1B DNA MER1_type -30 195 83 2 1155 277 183 116 71 chr15 74716064 74716176 -28778798 + CYRA11_Mm Unknown Y-chromosome 218 334 -283 2 1155 327 25 0 0 chr15 74716216 74716256 -28778718 + (CAGA)n Simple_repeat Simple_repeat 3 42 0 2 1155 259 225 60 48 chr15 74716256 74716340 -28778634 - L1M4c LINE L1 -3902 2482 2398 2 1155 748 276 54 77 chr15 74716351 74716649 -28778325 - B4A SINE B4 0 292 2 2 1155 7923 51 3 0 chr15 74716710 74717653 -28777321 - L1_Mus1 LINE L1 -2 6565 5620 2 1155 1062 269 147 125 chr15 74717855 74718580 -28776394 - L1M4c LINE L1 -4262 2122 1489 2 1155 2211 206 56 10 chr15 74718580 74719084 -28775890 - RLTR11A2 LTR ERVK 0 527 1 2 1155 1062 269 147 125 chr15 74719084 74719823 -28775151 - L1M4c LINE L1 -4896 1488 625 2 1155 971 264 43 65 chr15 74719862 74720138 -28774836 - B4A SINE B4 -19 273 4 2 1155 259 322 27 34 chr15 74720145 74720293 -28774681 - L1M4c LINE L1 -5747 637 491 2 1155 757 275 188 10 chr15 74720365 74720663 -28774311 - L1M4c LINE L1 -6009 375 25 2 1155 405 314 40 30 chr15 74720862 74721062 -28773912 - HAL1-2a_MD LINE L1 -506 2518 2317 2 1155 420 291 10 10 chr15 74721371 74721475 -28773499 + PB1D7 SINE Alu 3 106 -14 2 1155 283 236 87 0 chr15 74722021 74722124 -28772850 + MIRb SINE MIR 28 145 -123 2 1155 184 250 37 37 chr15 74722271 74722325 -28772649 + L2 LINE L2 65 118 -3301 2 1155 259 227 0 29 chr15 74724000 74724068 -28770906 - L1M2 LINE L1 -504 5796 5731 2 1155 298 192 122 49 chr15 74724218 74724300 -28770674 - MTEb LTR MaLR -14 365 278 2 1155 312 27 0 0 chr15 74724380 74724417 -28770557 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1155 389 207 96 12 chr15 74724663 74724740 -28770234 + RMER20B LTR ERVK 16 99 -528 2 1155 2863 64 11 5 chr15 74724740 74725119 -28769855 - MTA_Mm LTR MaLR 0 396 16 2 1155 546 181 0 0 chr15 74725120 74725225 -28769749 + (CA)n Simple_repeat Simple_repeat 2 106 0 2 1155 850 249 71 46 chr15 74725232 74725472 -28769502 + RMER20B LTR ERVK 359 604 -23 2 1155 293 250 0 15 chr15 74725471 74725536 -28769438 + RMER20B LTR ERVK 527 590 -37 2 1155 28 0 0 0 chr15 74725536 74725564 -28769410 + AT_rich Low_complexity Low_complexity 1 28 0 2 1155 894 78 132 0 chr15 74725568 74725689 -28769285 + B1_Mus2 SINE Alu 1 138 -9 2 1155 243 79 0 0 chr15 74725689 74725727 -28769247 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 2 1155 549 126 0 0 chr15 74725734 74725824 -28769150 + (GA)n Simple_repeat Simple_repeat 2 91 0 2 1155 369 0 0 0 chr15 74725824 74725865 -28769109 + (GGAA)n Simple_repeat Simple_repeat 1 41 0 2 1155 335 285 118 84 chr15 74726255 74726458 -28768516 + B3A SINE B2 1 210 -6 2 1155 1030 221 247 15 chr15 74727313 74727653 -28767321 - MTD LTR MaLR 0 419 1 2 1155 227 314 55 76 chr15 74728571 74728716 -28766258 + LTR81A LTR ERV1? 431 572 -778 2 1155 276 0 0 64 chr15 74729141 74729188 -28765786 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 2 1155 2319 164 65 0 chr15 74729190 74729575 -28765399 - MTC LTR MaLR -10 411 2 2 1155 3448 5 0 0 chr15 74730422 74730800 -28764174 - L1Md_T LINE L1 0 6582 6205 2 1155 253 353 64 64 chr15 74731145 74731378 -28763596 + MIRb SINE MIR 13 245 -23 2 1155 266 0 0 29 chr15 74732272 74732307 -28762667 + (TTTG)n Simple_repeat Simple_repeat 4 37 0 2 1155 776 245 89 10 chr15 74732307 74732498 -28762476 - ID_B1 SINE B4 -14 210 2 2 1155 1194 191 9 0 chr15 74732530 74732740 -28762234 - B3 SINE B2 -3 213 2 2 1155 2244 203 53 97 chr15 74733122 74733728 -28761246 + RLTR31A_Mm LTR ERVK 1 579 -5 2 1155 610 278 20 0 chr15 74734532 74734683 -28760291 + RSINE1 SINE B4 4 157 -8 2 1155 305 79 0 0 chr15 74734691 74734729 -28760245 + HAL1-3A_ME LINE L1 1977 2014 -844 2 1155 35 0 0 0 chr15 74734735 74734770 -28760204 + AT_rich Low_complexity Low_complexity 1 35 0 2 1155 488 227 26 35 chr15 74734770 74734884 -28760090 + PB1D10 SINE Alu 5 117 0 3 1155 883 165 106 50 chr15 74734886 74734953 -28760021 + B3 SINE B2 9 75 -141 3 1155 1626 116 205 12 chr15 74734953 74735101 -28759873 + RMER17C LTR ERVK 1 155 -255 3 1155 719 52 10 0 chr15 74735101 74735197 -28759777 + (TC)n Simple_repeat Simple_repeat 2 98 0 3 1155 1626 116 205 12 chr15 74735197 74735389 -28759585 + RMER17C LTR ERVK 156 406 -4 3 1155 883 165 106 50 chr15 74735389 74735500 -28759474 + B3 SINE B2 76 197 -19 3 1155 420 196 295 0 chr15 74735520 74735632 -28759342 - B1_Mus1 SINE Alu 0 148 4 3 1155 4679 51 3 2 chr15 74735714 74736284 -28758690 + L1_Mus1 LINE L1 5997 6567 0 3 1155 522 116 11 0 chr15 74736383 74736478 -28758496 + L1_Mus4 LINE L1 6540 6635 -1 3 1155 293 360 72 0 chr15 74736771 74736910 -28758064 + RMER15 LTR ERVL 422 570 -5 3 1155 271 310 151 61 chr15 74736934 74737340 -28757634 + MLT2D LTR ERVL 69 560 0 3 1155 387 293 56 16 chr15 74737340 74737454 -28757520 + B1F SINE Alu 24 142 -7 3 1155 473 234 8 83 chr15 74737349 74737470 -28757504 + ID_B1 SINE B4 113 224 0 3 1155 1401 179 198 6 chr15 74738059 74738373 -28756601 - ORR1D1 LTR MaLR 0 374 1 3 1155 870 96 36 0 chr15 74738497 74738663 -28756311 + (CA)n Simple_repeat Simple_repeat 2 173 0 3 1155 1029 116 0 31 chr15 74738923 74738939 -28756035 - B2_Mm2 SINE B2 -27 168 156 3 1155 233 29 0 29 chr15 74738939 74738974 -28756000 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 3 1155 1029 116 0 31 chr15 74738974 74739117 -28755857 - B2_Mm2 SINE B2 -40 155 14 3 1155 231 210 15 75 chr15 74739061 74739128 -28755846 - tRNA-Lys-AAA tRNA tRNA -13 63 1 3 1155 495 134 0 0 chr15 74739570 74739652 -28755322 + (TCTA)n Simple_repeat Simple_repeat 2 83 0 3 1155 268 280 0 27 chr15 74739652 74739762 -28755212 + CT-rich Low_complexity Low_complexity 1 107 0 3 1155 666 76 38 0 chr15 74741381 74741486 -28753488 + L1_Mus2 LINE L1 6458 6566 0 3 1155 31 0 0 0 chr15 74741541 74741572 -28753402 + AT_rich Low_complexity Low_complexity 1 31 0 3 1155 1354 41 122 0 chr15 74741715 74741887 -28753087 + B2_Mm1a SINE B2 1 193 0 3 1155 266 301 96 22 chr15 74742129 74742265 -28752709 + MER2B DNA MER2_type 157 302 -34 3 1155 269 310 11 6 chr15 74742821 74743007 -28751967 + (CA)n Simple_repeat Simple_repeat 1 187 0 3 1155 4835 213 42 19 chr15 74743238 74744448 -28750526 + RMER1B Other Other 35 1057 -9 3 1155 461 17 17 0 chr15 74745870 74745928 -28749046 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 1155 307 301 14 0 chr15 74746115 74746188 -28748786 - ID_B1 SINE B4 -109 115 42 3 1155 258 242 212 0 chr15 74746147 74746213 -28748761 - ID4 SINE ID -2 81 2 3 1155 270 346 83 0 chr15 74746221 74746354 -28748620 - MER67C LTR ERV1 -165 546 403 3 1155 249 327 58 0 chr15 74746878 74746982 -28747992 + MLT1A0 LTR MaLR 218 327 -38 3 1155 367 239 54 2 chr15 74747091 74747190 -28747784 + B1F1 SINE Alu 25 124 -23 3 1155 598 297 142 42 chr15 74747214 74747483 -28747491 - MER31B LTR ERV1 -14 452 150 3 1155 1663 32 0 0 chr15 74747483 74747673 -28747301 - B2_Mm1a SINE B2 -2 191 2 3 1155 598 243 231 28 chr15 74747673 74747785 -28747189 - MER31B LTR ERV1 -317 149 1 3 1155 905 293 74 36 chr15 74747853 74748218 -28746756 + MLT-int LTR MaLR 249 627 -1108 3 1155 235 347 41 41 chr15 74748237 74748360 -28746614 + MLT-int LTR MaLR 670 792 -943 3 1155 1021 187 48 19 chr15 74749425 74749632 -28745342 + B3 SINE B2 1 213 -3 3 1155 230 275 29 14 chr15 74749646 74749716 -28745258 + ID4 SINE ID 12 82 -1 3 1155 1265 51 46 0 chr15 74749802 74749977 -28744997 + L1_Mus3 LINE L1 6455 6637 -1 3 1155 291 226 22 154 chr15 74749978 74750114 -28744860 - LTR83 LTR ERVL -152 628 511 3 1155 367 152 0 29 chr15 74750383 74750451 -28744523 - MTD LTR MaLR 0 419 354 3 1155 1123 63 42 0 chr15 74750644 74750786 -28744188 + B1_Mus1 SINE Alu 1 148 0 3 1155 417 39 0 0 chr15 74750808 74750859 -28744115 + (GGAA)n Simple_repeat Simple_repeat 3 53 0 3 1155 226 261 101 0 chr15 74751187 74751256 -28743718 - MTD LTR MaLR -68 351 276 3 1155 349 296 8 42 chr15 74751705 74751825 -28743149 + RSINE1 SINE B4 3 118 -47 3 1155 204 163 23 0 chr15 74752304 74752347 -28742627 + T-rich Low_complexity Low_complexity 3 46 0 3 1155 502 248 8 66 chr15 74752352 74752473 -28742501 - B1F2 SINE Alu -22 127 14 3 1155 1106 62 21 0 chr15 74752488 74752632 -28742342 - B1_Mus1 SINE Alu 0 148 2 3 1155 234 340 127 13 chr15 74752953 74753111 -28741863 + MLT1F LTR MaLR 134 309 -239 3 1155 453 263 113 54 chr15 74756044 74756229 -28738745 + B3A SINE B2 3 198 0 3 1155 273 119 0 0 chr15 74756392 74756434 -28738540 + (A)n Simple_repeat Simple_repeat 1 42 0 3 1155 457 138 195 0 chr15 74756879 74756966 -28738008 + RLTR24 LTR ERV1 426 529 0 3 1155 220 345 0 0 chr15 74757045 74757103 -28737871 + (CG)n Simple_repeat Simple_repeat 2 59 0 3 1155 246 271 0 0 chr15 74757350 74757409 -28737565 + Tigger7 DNA MER2_type 40 98 -2393 3 1155 448 256 39 137 chr15 74757393 74757678 -28737296 - MER31A LTR ERV1 -210 275 19 3 1155 1052 103 0 14 chr15 74758119 74758267 -28736707 - B1_Mus1 SINE Alu -1 147 2 3 1155 374 188 214 14 chr15 74758785 74758925 -28736049 - Lx5 LINE L1 -3 7047 6880 3 1155 194 129 0 0 chr15 74759154 74759185 -28735789 - L2c LINE L2 -329 3058 3028 3 1155 266 0 0 29 chr15 74759230 74759265 -28735709 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 1155 1162 44 0 0 chr15 74759268 74759403 -28735571 - B1_Mus1 SINE Alu -12 136 2 3 1155 254 310 19 39 chr15 74759546 74759650 -28735324 - RMER5 LTR ERV1 -16 518 417 3 1155 1169 63 0 0 chr15 74759651 74759794 -28735180 + B1_Mus1 SINE Alu 1 143 -5 3 1155 428 270 148 34 chr15 74759813 74760289 -28734685 + RMER19C LTR ERVK 33 591 -20 3 1155 1085 230 58 44 chr15 74760317 74760518 -28734456 + MurERV4-int LTR ERVK 2 218 -5042 3 1155 1343 49 0 10 chr15 74760518 74760725 -28734249 + (GAA)n Simple_repeat Simple_repeat 1 204 0 3 1155 1085 276 89 64 chr15 74760725 74760943 -28734031 + MurERV4-int LTR ERVK 196 434 -5346 3 1155 790 269 77 53 chr15 74761134 74761472 -28733502 + MurERV4-int LTR ERVK 1404 1749 -3511 3 1155 1505 218 59 28 chr15 74761518 74761909 -28733065 + RMER17C LTR ERVK 1 403 -7 3 1155 509 303 103 47 chr15 74762460 74762971 -28732003 + RLTR6-int LTR ERV1 1058 1841 -5937 3 1155 343 239 88 30 chr15 74762998 74763138 -28731836 + RLTR6-int LTR ERV1 2936 3179 -4599 3 1155 635 283 9 49 chr15 74763200 74763423 -28731551 + RLTR6-int LTR ERV1 3315 3528 -4250 3 1155 211 67 43 22 chr15 74763499 74763545 -28731429 + (TTTTG)n Simple_repeat Simple_repeat 1 47 0 3 1155 1207 68 0 0 chr15 74763547 74763695 -28731279 - B1_Mus1 SINE Alu 0 148 1 3 1155 1076 97 7 0 chr15 74763890 74764035 -28730939 + B1_Mus2 SINE Alu 2 147 0 3 1155 2217 68 0 20 chr15 74764147 74764448 -28730526 - RLTR4_Mm LTR ERV1 0 742 448 3 1155 1725 75 78 8 chr15 74764422 74764678 -28730296 - RLTR4_Mm LTR ERV1 -468 274 1 3 1155 968 41 0 0 chr15 74765060 74765183 -28729791 - B1_Mm SINE Alu -24 123 1 3 1155 474 240 21 85 chr15 74765183 74765212 -28729762 - MT2B LTR ERVL -449 152 133 3 1155 775 310 114 53 chr15 74765212 74765850 -28729124 + RLTR4_MM-int LTR ERV1 4911 5587 -2014 3 1155 588 138 11 0 chr15 74766135 74766229 -28728745 - RMER16 LTR ERVK 0 533 439 3 1155 1209 54 0 0 chr15 74766235 74766382 -28728592 - B1_Mus2 SINE Alu 0 147 1 3 1155 799 191 14 7 chr15 74766388 74766536 -28728438 - RMER16 LTR ERVK -384 149 1 3 1155 240 35 0 0 chr15 74766816 74766845 -28728129 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1155 314 294 29 19 chr15 74766944 74767048 -28727926 + PB1D10 SINE Alu 13 117 0 3 1155 192 40 0 0 chr15 74767703 74767728 -28727246 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 3 1155 269 51 16 63 chr15 74768002 74768065 -28726909 + (CAAAAA)n Simple_repeat Simple_repeat 2 61 0 3 1155 655 173 55 0 chr15 74768227 74768337 -28726637 + B1_Mur1 SINE Alu 32 147 -2 3 1155 822 129 106 7 chr15 74768418 74768559 -28726415 + MTD LTR MaLR 3 157 -262 3 1155 783 249 65 45 chr15 74768614 74768899 -28726075 + RLTR11A2 LTR ERVK 1 298 -230 3 1155 1217 181 157 9 chr15 74768889 74769207 -28725767 + MTC-int LTR MaLR 884 1248 -10 3 1155 251 215 14 97 chr15 74769786 74769845 -28725129 + B1F SINE Alu 9 61 -88 3 1155 714 237 48 78 chr15 74769845 74770051 -28724923 + ORR1D2 LTR MaLR 1 200 -170 3 1155 3886 190 34 32 chr15 74770051 74770904 -28724070 - RLTR13A LTR ERVK 0 855 1 3 1155 36170 85 17 22 chr15 74770927 74772588 -28722386 - ETnERV3-int LTR ERVK -126 5682 4010 3 1155 396 0 0 0 chr15 74772588 74772632 -28722342 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 3 1155 36170 85 17 22 chr15 74772632 74773083 -28721891 - ETnERV3-int LTR ERVK -1799 4009 3535 3 1155 1229 48 0 0 chr15 74773083 74773230 -28721744 - B1_Mus2 SINE Alu 0 147 1 3 1155 36170 98 15 20 chr15 74773230 74776640 -28718334 - ETnERV3-int LTR ERVK -2274 3534 186 3 1155 1129 143 11 11 chr15 74776981 74777165 -28717809 - ETnERV3-int LTR ERVK -5622 186 3 3 1155 3870 195 34 32 chr15 74777167 74778020 -28716954 - RLTR13A LTR ERVK 0 855 1 3 1155 438 205 45 52 chr15 74778037 74778171 -28716803 + ORR1D2 LTR MaLR 230 362 -8 3 1155 211 132 0 26 chr15 74778189 74778228 -28716746 + A-rich Low_complexity Low_complexity 3 40 0 3 1155 1197 62 0 0 chr15 74778291 74778435 -28716539 - B1_Mus1 SINE Alu -1 147 4 3 1155 771 245 67 5 chr15 74778576 74778769 -28716205 - ID_B1 SINE B4 -15 209 5 3 1155 945 228 107 8 chr15 74778822 74779074 -28715900 - RMER5 LTR ERV1 -17 517 241 3 1155 219 139 0 0 chr15 74779530 74779566 -28715408 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 3 1155 3897 122 40 15 chr15 74779670 74780752 -28714222 + RLTR13D1 LTR ERVK 1 806 0 3 1155 2113 157 20 73 chr15 74781385 74781659 -28713315 - ORR1C1 LTR MaLR 0 378 109 3 1155 2633 79 161 141 chr15 74781659 74782161 -28712813 - RLTR1B LTR ERV1 0 512 1 3 1155 2113 157 20 73 chr15 74782161 74782285 -28712689 - ORR1C1 LTR MaLR -270 108 1 3 1155 664 259 53 57 chr15 74782577 74782786 -28712188 + ID_B1 SINE B4 1 208 -16 3 1155 182 243 139 63 chr15 74783627 74783706 -28711268 - L2c LINE L2 -18 3369 3285 3 1155 522 0 0 0 chr15 74783954 74784012 -28710962 + (GA)n Simple_repeat Simple_repeat 1 58 0 3 1155 1523 128 56 137 chr15 74784017 74784111 -28710863 - RMER17C LTR ERVK -35 375 263 3 1155 300 91 0 0 chr15 74784111 74784155 -28710819 + (TATAG)n Simple_repeat Simple_repeat 1 44 0 3 1155 1523 128 56 137 chr15 74784155 74784273 -28710701 - RMER17C LTR ERVK -148 262 185 3 1155 984 41 0 0 chr15 74784273 74784394 -28710580 + (GGAGA)n Simple_repeat Simple_repeat 5 125 0 3 1155 1523 128 56 137 chr15 74784394 74784588 -28710386 - RMER17C LTR ERVK -226 184 1 3 1155 291 113 0 0 chr15 74786929 74786982 -28707992 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 3 1155 286 310 69 26 chr15 74789848 74789964 -28705010 + MT2B2 LTR ERVL 145 265 -319 4 1155 325 248 168 0 chr15 74789877 74789978 -28704996 + B1_Mur2 SINE Alu 12 129 -20 4 1155 410 202 143 9 chr15 74790237 74790342 -28704632 - PB1D9 SINE Alu 0 120 2 4 1155 212 243 0 0 chr15 74790388 74790425 -28704549 - B1F2 SINE Alu -112 37 1 4 1155 279 0 0 0 chr15 74792138 74792169 -28702805 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1155 33 56 0 0 chr15 74792174 74792228 -28702746 + AT_rich Low_complexity Low_complexity 1 54 0 4 1155 971 176 132 5 chr15 74792240 74792404 -28702570 + B3 SINE B2 1 167 -49 4 1155 294 95 0 0 chr15 74792404 74792446 -28702528 + (CAGA)n Simple_repeat Simple_repeat 4 45 0 4 1155 971 176 132 5 chr15 74792446 74792470 -28702504 + B3 SINE B2 168 212 -4 4 1155 2365 138 43 57 chr15 74792638 74792848 -28702126 - MTC LTR MaLR -4 417 206 4 1155 414 39 0 0 chr15 74792848 74792900 -28702074 + (TCC)n Simple_repeat Simple_repeat 3 54 0 4 1155 1261 42 0 0 chr15 74792902 74793045 -28701929 - B1_Mus1 SINE Alu -5 143 1 4 1155 2365 138 43 57 chr15 74793045 74793254 -28701720 - MTC LTR MaLR -216 205 1 4 1155 1179 68 0 7 chr15 74793403 74793550 -28701424 + B1_Mus2 SINE Alu 2 147 0 4 1155 572 278 112 57 chr15 74794630 74795038 -28699936 - RLTR26 LTR ERVK -113 514 2 4 1155 12471 143 48 24 chr15 74795051 74795649 -28699325 - MERVK26-int LTR ERVK -1 6918 6319 4 1155 480 35 0 0 chr15 74795649 74795707 -28699267 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 1155 12471 143 48 24 chr15 74795707 74796672 -28698302 - MERVK26-int LTR ERVK -601 6318 5326 4 1155 698 276 135 30 chr15 74796672 74797005 -28697969 + RLTR9A LTR ERVK 1 368 0 4 1155 12471 143 48 24 chr15 74797005 74797303 -28697671 - MERVK26-int LTR ERVK -1594 5325 5015 4 1155 222 37 0 0 chr15 74797303 74797330 -28697644 + (TGGGGG)n Simple_repeat Simple_repeat 1 27 0 4 1155 12471 143 48 24 chr15 74797330 74797629 -28697345 - MERVK26-int LTR ERVK -1905 5014 4708 4 1155 1445 286 107 70 chr15 74799184 74799886 -28695088 - RMER13A LTR ERVK -35 825 98 4 1155 802 213 0 0 chr15 74799970 74800125 -28694849 + MERVK26-int LTR ERVK 3609 3763 -3156 4 1155 2820 142 93 14 chr15 74800125 74800611 -28694363 + RLTR28 LTR ERVL 1 524 0 4 1155 2233 237 99 34 chr15 74801496 74802142 -28692832 + Lx7 LINE L1 6728 7415 -281 4 1155 1239 56 0 0 chr15 74802205 74802348 -28692626 + B1_Mus1 SINE Alu 1 143 -5 4 1155 1146 227 37 46 chr15 74802656 74803008 -28691966 - MT2A LTR ERVL -7 594 114 4 1155 452 269 49 88 chr15 74803008 74803212 -28691762 - RMER12 LTR ERVK 0 1322 1127 4 1155 378 0 0 0 chr15 74803215 74803257 -28691717 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1155 5466 112 24 32 chr15 74803446 74803769 -28691205 - RLTR22_Mur LTR ERVK -973 875 545 4 1155 1152 78 120 0 chr15 74803769 74803936 -28691038 - B2_Mm2 SINE B2 -8 187 1 4 1155 5466 112 24 32 chr15 74803936 74804494 -28690480 - RLTR22_Mur LTR ERVK -1304 544 1 4 1155 709 125 0 9 chr15 74804494 74804599 -28690375 - MT2A LTR ERVL -426 107 4 4 1155 663 199 117 37 chr15 74804859 74805021 -28689953 + B3 SINE B2 17 191 -25 4 1155 488 301 68 55 chr15 74805506 74805742 -28689232 + RMER2 LTR ERV1 329 567 0 4 1155 911 114 0 51 chr15 74805758 74805896 -28689078 + B2_Mm2 SINE B2 2 132 -63 4 1155 438 88 0 20 chr15 74805921 74806035 -28688939 + B2_Mm2 SINE B2 47 194 -1 4 1155 222 176 0 0 chr15 74806047 74806098 -28688876 + GA-rich Low_complexity Low_complexity 2 52 0 4 1155 2066 207 43 70 chr15 74806345 74806499 -28688475 + RLTR20B2 LTR ERVK 1 153 -407 4 1155 3131 52 10 5 chr15 74806499 74806887 -28688087 + RLTR10 LTR ERVK 1 390 0 4 1155 2066 207 43 70 chr15 74806887 74807179 -28687795 + RLTR20B2 LTR ERVK 154 455 -105 4 1155 1121 89 7 0 chr15 74807179 74807325 -28687649 + B1_Mus1 SINE Alu 2 148 0 4 1155 2066 207 43 70 chr15 74807325 74807337 -28687637 + RLTR20B2 LTR ERVK 456 456 -104 4 1155 351 0 0 0 chr15 74807337 74807376 -28687598 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 4 1155 2066 207 43 70 chr15 74807376 74807445 -28687529 + RLTR20B2 LTR ERVK 456 516 -44 4 1155 446 291 0 30 chr15 74807448 74807578 -28687396 - RLTR33 LTR ERVK -150 528 403 4 1155 1889 181 12 8 chr15 74807578 74808032 -28686942 - RLTR33 LTR ERVK -1 677 181 4 1155 1348 179 66 103 chr15 74808034 74808412 -28686562 + RMER16 LTR ERVK 3 533 0 4 1155 976 100 87 71 chr15 74808412 74808575 -28686399 - RLTR33 LTR ERVK -492 186 18 4 1155 1354 97 16 0 chr15 74808575 74808761 -28686213 - B2_Mm1a SINE B2 -4 189 1 4 1155 976 100 87 71 chr15 74808761 74808780 -28686194 - RLTR33 LTR ERVK -661 17 1 4 1155 848 183 48 24 chr15 74808986 74809154 -28685820 - RLTR33 LTR ERVK -345 333 162 4 1155 466 290 20 7 chr15 74810676 74810822 -28684152 + B1F SINE Alu 1 148 -1 4 1155 395 319 72 30 chr15 74810843 74811108 -28683866 + B4A SINE B4 2 277 -15 4 1155 689 300 11 94 chr15 74811170 74811418 -28683556 + B4 SINE B4 5 230 -62 4 1155 532 239 8 41 chr15 74811418 74811540 -28683434 + B3 SINE B2 1 118 -98 4 1155 339 44 0 0 chr15 74811657 74811702 -28683272 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1155 376 183 11 99 chr15 74814089 74814106 -28680868 - B1_Mus2 SINE Alu -1 146 136 4 1155 354 45 0 0 chr15 74814106 74814150 -28680824 + (TTG)n Simple_repeat Simple_repeat 2 45 0 4 1155 434 210 12 0 chr15 74814150 74814231 -28680743 - B1_Mur3 SINE Alu -10 139 58 4 1155 292 290 31 31 chr15 74815280 74815376 -28679598 - RMER15 LTR ERVL -124 451 356 4 1155 393 22 0 0 chr15 74816008 74816054 -28678920 + (TAAAA)n Simple_repeat Simple_repeat 3 48 0 4 1155 836 69 9 0 chr15 74816314 74816430 -28678544 + (TTTTC)n Simple_repeat Simple_repeat 4 120 0 4 1155 225 0 0 0 chr15 74816978 74817003 -28677971 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 4 1155 6505 48 0 0 chr15 74817529 74818304 -28676670 - L1_Mus1 LINE L1 0 6567 5793 4 1155 189 0 0 0 chr15 74818312 74818333 -28676641 + (TTA)n Simple_repeat Simple_repeat 1 21 0 4 1155 634 259 0 7 chr15 74818380 74818520 -28676454 - ID_B1 SINE B4 0 224 86 4 1155 1763 168 11 73 chr15 74820082 74820519 -28674455 + RMER17C LTR ERVK 1 410 0 4 1155 360 0 0 0 chr15 74821128 74821168 -28673806 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 1155 2905 70 0 0 chr15 74821168 74821526 -28673448 - L1_Mus1 LINE L1 -6 6561 6204 4 1155 373 306 7 71 chr15 74821582 74821737 -28673237 + RLTR14 LTR ERV1 224 368 -14 4 1155 1372 261 73 25 chr15 74821791 74821896 -28673078 - RMER5 LTR ERV1 0 534 434 4 1155 1769 149 19 167 chr15 74821896 74822188 -28672786 - RMER10B LTR ERVL 0 398 174 4 1155 390 42 0 0 chr15 74822188 74822236 -28672738 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 1155 1769 149 19 167 chr15 74822236 74822410 -28672564 - RMER10B LTR ERVL -225 173 2 4 1155 1372 261 73 25 chr15 74822410 74822783 -28672191 - RMER5 LTR ERV1 -101 433 33 4 1155 276 225 24 24 chr15 74822974 74823056 -28671918 - PB1D10 SINE Alu -32 85 4 4 1155 754 273 24 42 chr15 74823562 74823847 -28671127 - RLTR18B LTR ERVK -44 572 187 4 1155 356 339 16 71 chr15 74823907 74824091 -28670883 - RLTR18 LTR ERVK -335 281 108 4 1155 2725 131 101 28 chr15 74824501 74825117 -28669857 - RMER17A2 LTR ERVK 0 906 192 4 1155 378 148 0 16 chr15 74825121 74825183 -28669791 - RMER17A2 LTR ERVK -845 61 1 4 1155 249 264 94 52 chr15 74825942 74826030 -28668944 + B4 SINE B4 130 221 -71 4 1155 503 246 110 0 chr15 74826030 74826148 -28668826 + B3 SINE B2 2 132 -84 4 1155 538 169 18 4 chr15 74828687 74828793 -28666181 - B1_Mur3 SINE Alu 0 149 12 4 1155 270 262 88 69 chr15 74829448 74829608 -28665366 - RMER15 LTR ERVL -55 520 358 4 1155 1261 195 104 61 chr15 74830777 74831170 -28663804 + RMER17C LTR ERVK 1 410 0 4 1155 4002 105 18 4 chr15 74831502 74832058 -28662916 - RMER2 LTR ERV1 0 567 4 4 1155 225 94 0 0 chr15 74832127 74832159 -28662815 + (TCCCC)n Simple_repeat Simple_repeat 3 34 0 4 1155 414 0 0 0 chr15 74832621 74832667 -28662307 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 4 1155 2585 118 0 19 chr15 74832934 74833306 -28661668 - RLTR8 LTR ERVK 0 365 1 4 1155 458 160 0 0 chr15 74833449 74833524 -28661450 - B1_Mus2 SINE Alu 0 147 73 4 1155 406 221 28 19 chr15 74833727 74833833 -28661141 - RLTR23 LTR ERV1 0 430 324 4 1155 533 211 97 76 chr15 74833912 74834056 -28660918 - B1_Mur2 SINE Alu 0 149 3 4 1155 6671 62 49 0 chr15 74834132 74834983 -28659991 + RLTR13B1 LTR ERVK 1 893 0 4 1155 1139 119 16 26 chr15 74835320 74835423 -28659551 - B2_Mm2 SINE B2 -6 189 88 4 1155 2724 82 141 139 chr15 74835423 74835934 -28659040 - RLTR1B LTR ERV1 0 512 1 4 1155 1139 119 16 26 chr15 74835934 74836020 -28658954 - B2_Mm2 SINE B2 -108 87 2 4 1155 268 338 0 0 chr15 74836079 74836153 -28658821 - ORR1E LTR MaLR -259 100 27 4 1155 1119 194 12 210 chr15 74836239 74836519 -28658455 - RMER10B LTR ERVL 0 398 193 4 1155 1454 17 11 0 chr15 74836519 74836695 -28658279 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 4 1155 1119 194 12 210 chr15 74836695 74836910 -28658064 - RMER10B LTR ERVL -206 192 1 4 1155 1559 175 44 3 chr15 74836971 74837264 -28657710 - MTC LTR MaLR -55 366 62 4 1155 201 121 0 0 chr15 74838010 74838043 -28656931 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 4 1155 955 142 14 0 chr15 74838122 74838270 -28656704 + B1_Mur4 SINE Alu 1 150 0 4 1155 627 197 0 0 chr15 74838273 74838451 -28656523 + GA-rich Low_complexity Low_complexity 3 180 0 4 1155 19532 132 24 2 chr15 74838458 74841370 -28653604 + MERVL-int LTR ERVL 1999 4975 -510 4 144 3810 98 27 11 chr15 74841372 74842169 -28652805 - L1_Mus3 LINE L1 -588 6470 5318 4 1156 2561 152 103 50 chr15 74842319 74842844 -28652130 + MERVL_2A-int LTR ERVL 5077 5629 -132 4 1156 249 181 26 53 chr15 74842844 74842920 -28652054 + ORR1A3-int LTR MaLR 567 640 -1323 4 1156 288 54 0 0 chr15 74842921 74842958 -28652016 + MERVL-int LTR ERVL 5449 5485 0 4 1156 2800 132 27 40 chr15 74842958 74843439 -28651535 + MT2C_Mm LTR ERVL 1 475 0 4 1156 918 216 0 0 chr15 74843439 74843624 -28651350 - ORR1A3 LTR MaLR -94 232 48 4 1156 36252 42 5 9 chr15 74843624 74848798 -28646176 + L1Md_F2 LINE L1 441 5585 -298 4 1156 8133 47 2 8 chr15 74848799 74849801 -28645173 + L1Md_F2 LINE L1 5587 6582 0 4 1156 342 167 0 0 chr15 74849877 74849937 -28645037 - ORR1A3 LTR MaLR -267 60 1 4 1156 380 291 108 25 chr15 74849998 74850202 -28644772 + MLT1B LTR MaLR 32 252 -138 4 1156 248 200 170 96 chr15 74850227 74850321 -28644653 - PB1D10 SINE Alu -16 101 1 4 1156 426 284 89 17 chr15 74850409 74850645 -28644329 + L1M4 LINE L1 4283 4535 -1611 4 1156 38 0 0 0 chr15 74850646 74850684 -28644290 + AT_rich Low_complexity Low_complexity 1 38 0 4 1156 390 243 119 55 chr15 74850687 74850796 -28644178 - RSINE1 SINE B4 -3 162 47 5 1156 313 47 0 72 chr15 74850824 74850893 -28644081 + (GGGA)n Simple_repeat Simple_repeat 4 67 0 5 1156 417 266 81 0 chr15 74850956 74851080 -28643894 + ID_B1 SINE B4 91 224 0 5 1156 26 30 0 0 chr15 74851422 74851455 -28643519 + AT_rich Low_complexity Low_complexity 1 33 0 5 1156 1070 73 0 0 chr15 74851801 74851938 -28643036 + B1_Mus1 SINE Alu 5 141 -7 5 1156 186 43 0 0 chr15 74851942 74851965 -28643009 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1156 239 225 24 24 chr15 74852141 74852218 -28642756 + PB1D10 SINE Alu 4 80 -37 5 1156 261 342 9 0 chr15 74852218 74852332 -28642642 + B4A SINE B4 2 116 -176 5 1156 280 311 120 10 chr15 74852405 74852597 -28642377 - L1MB7 LINE L1 -182 6002 5790 5 1156 857 228 125 12 chr15 74852913 74853241 -28641733 + RMER5 LTR ERV1 69 433 -101 5 1156 1480 216 3 27 chr15 74853241 74853515 -28641459 + RMER10B LTR ERVL 1 268 -130 5 1156 609 52 0 0 chr15 74853515 74853592 -28641382 + (TC)n Simple_repeat Simple_repeat 1 77 0 5 1156 1480 216 3 27 chr15 74853592 74853655 -28641319 + RMER10B LTR ERVL 269 330 -68 5 1156 396 40 0 0 chr15 74853659 74853709 -28641265 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1156 635 0 13 0 chr15 74853709 74853784 -28641190 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 5 1156 296 300 20 10 chr15 74853873 74853974 -28641000 + RMER5 LTR ERV1 433 534 0 5 1156 548 210 8 16 chr15 74854830 74854951 -28640023 - RMER17C LTR ERVK -1 409 290 5 1156 454 279 26 52 chr15 74854972 74855127 -28639847 - B4A SINE B4 -140 152 2 5 1156 256 325 119 24 chr15 74855185 74855437 -28639537 - B4A SINE B4 -15 277 2 5 1156 494 264 27 14 chr15 74855462 74855608 -28639366 - B1F SINE Alu -1 148 1 5 1156 2926 208 13 33 chr15 74856918 74857526 -28637448 + RMER1B Other Other 462 1057 -9 5 1156 432 0 0 0 chr15 74857681 74857729 -28637245 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1156 3566 43 2 7 chr15 74857794 74858236 -28636738 + L1Md_F2 LINE L1 6142 6581 -1 5 1156 235 254 15 0 chr15 74858501 74858568 -28636406 + RLTR18 LTR ERVK 2 69 -443 5 1156 271 353 17 77 chr15 74858588 74858769 -28636205 + RLTR18 LTR ERVK 113 282 -334 5 1156 398 265 92 12 chr15 74858855 74859019 -28635955 + RLTR18B LTR ERVK 193 369 -143 5 1156 32 0 0 0 chr15 74859022 74859054 -28635920 + AT_rich Low_complexity Low_complexity 1 32 0 5 1156 230 222 0 18 chr15 74859054 74859109 -28635865 + RLTR18B LTR ERVK 371 424 -88 5 1156 228 35 0 0 chr15 74859182 74859211 -28635763 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1156 753 78 35 9 chr15 74859473 74859589 -28635385 - MTB_Mm LTR MaLR 0 400 282 5 1156 4749 86 36 29 chr15 74859592 74860396 -28634578 + RLTR13C2 LTR ERVK 1 983 0 5 1156 1928 78 35 3 chr15 74860396 74860677 -28634297 - MTB_Mm LTR MaLR -117 290 1 5 1156 5228 122 11 81 chr15 74860677 74861684 -28633290 - MTB_Mm-int LTR MaLR 0 1098 164 5 1156 2381 50 10 0 chr15 74861684 74862184 -28632790 - RLTR10C LTR ERVK 0 436 1 5 1156 812 174 6 0 chr15 74862184 74862353 -28632621 - MTB_Mm-int LTR MaLR -928 170 1 5 1156 1252 124 50 0 chr15 74862353 74862555 -28632419 - MTB_Mm LTR MaLR 0 400 189 5 1156 3655 61 43 50 chr15 74862555 74863071 -28631903 - RLTR1B LTR ERV1 0 512 1 5 1156 7423 85 25 71 chr15 74863071 74864912 -28630062 - RLTR1B-int LTR ERV1 0 3299 1961 5 1156 565 25 12 12 chr15 74864913 74864993 -28629981 + (TTTTG)n Simple_repeat Simple_repeat 1 80 0 5 1156 1068 67 0 0 chr15 74864993 74865127 -28629847 - B1_Mus1 SINE Alu -13 135 2 5 1156 180 77 0 0 chr15 74865138 74865164 -28629810 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 5 1156 35763 73 10 11 chr15 74865169 74871433 -28623541 - L1Md_F3 LINE L1 -3 6581 355 5 1156 1882 87 7 14 chr15 74871429 74871546 -28623428 - MusHAL1 LINE L1 -2726 628 513 5 1156 2974 91 5 2 chr15 74871546 74871966 -28623008 + BGLII LTR ERVK 1 421 0 5 1156 1882 87 7 14 chr15 74871966 74872138 -28622836 - MusHAL1 LINE L1 -2842 512 341 5 1156 340 87 0 42 chr15 74872342 74872414 -28622560 + (TTTTTG)n Simple_repeat Simple_repeat 2 70 0 5 1156 676 91 45 96 chr15 74872416 74872563 -28622411 - B1_Mm SINE Alu 0 150 1 5 1156 803 162 0 13 chr15 74872674 74872824 -28622150 - RLTR33 LTR ERVK -350 328 181 5 1156 480 158 38 49 chr15 74872824 74872987 -28621987 + RMER16 LTR ERVK 198 335 -198 5 1156 852 126 14 0 chr15 74872998 74873141 -28621833 + B1_Mm SINE Alu 3 147 0 5 1156 194 81 0 26 chr15 74873142 74873180 -28621794 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 5 1156 727 222 11 16 chr15 74873181 74873364 -28621610 + RMER16 LTR ERVK 352 533 0 5 1156 865 129 85 12 chr15 74873373 74873538 -28621436 - RLTR33 LTR ERVK -501 177 1 5 1156 687 229 62 26 chr15 74873713 74873906 -28621068 - RLTR33 LTR ERVK -317 361 162 5 1156 225 119 0 0 chr15 74874283 74874325 -28620649 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1156 651 262 52 30 chr15 74874369 74874634 -28620340 - RLTR18B LTR ERVK -47 569 193 5 1156 512 269 14 7 chr15 74876145 74876287 -28618687 + B1F SINE Alu 6 148 -1 5 1156 261 346 71 34 chr15 74876308 74876574 -28618400 + B4A SINE B4 2 277 -15 5 1156 639 287 27 85 chr15 74876635 74876877 -28618097 + B4 SINE B4 4 230 -62 5 1156 421 303 7 43 chr15 74876877 74877015 -28617959 + B3 SINE B2 1 133 -83 5 1156 333 0 0 0 chr15 74877122 74877159 -28617815 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1156 464 176 11 0 chr15 74879590 74879681 -28615293 - B1_Mur3 SINE Alu 0 149 58 5 1156 1268 188 96 56 chr15 74881680 74882074 -28612900 + RMER17C LTR ERVK 1 410 0 5 1156 3851 110 18 4 chr15 74882386 74882942 -28612032 - RMER2 LTR ERV1 0 567 4 5 1156 225 94 0 0 chr15 74883012 74883044 -28611930 + (TCCCC)n Simple_repeat Simple_repeat 3 34 0 5 1156 2509 126 0 19 chr15 74883785 74884157 -28610817 - RLTR8 LTR ERVK 0 365 1 5 1156 3318 125 4 37 chr15 74884194 74884526 -28610448 - RLTR45-int LTR ERVK -1173 6071 5973 5 1156 1878 142 154 28 chr15 74884526 74884954 -28610020 + RLTR45 LTR ERVK 1 482 0 5 1156 3318 83 6 35 chr15 74884954 74885332 -28609642 - RLTR45-int LTR ERVK -1272 5972 5597 5 1156 970 131 0 0 chr15 74885332 74885477 -28609497 - B2_Mm2 SINE B2 -49 146 2 5 1156 278 136 16 33 chr15 74885625 74885686 -28609288 + RLTR1B LTR ERV1 81 140 -372 5 1156 1419 132 110 52 chr15 74885683 74886011 -28608963 - MURVY-LTR LTR ERV1 -127 392 46 5 1156 1308 84 62 0 chr15 74886122 74886281 -28608693 + B2_Mm2 SINE B2 1 159 -36 5 1156 183 80 0 0 chr15 74886281 74886306 -28608668 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 5 1156 1308 84 62 0 chr15 74886306 74886324 -28608650 + B2_Mm2 SINE B2 160 188 -7 5 1156 399 288 99 78 chr15 74886498 74886544 -28608430 + B4 SINE B4 37 200 -92 5 1156 843 180 0 0 chr15 74886544 74886683 -28608291 + B1_Mur4 SINE Alu 12 150 0 5 1156 18116 113 33 4 chr15 74886691 74889950 -28605024 + MERVL-int LTR ERVL 1999 5352 -133 5 1156 271 100 100 0 chr15 74890011 74890071 -28604903 + MERVL-int LTR ERVL 5564 5629 -132 5 1156 233 233 13 40 chr15 74890071 74890147 -28604827 + ORR1A3-int LTR MaLR 567 640 -1323 5 1156 2886 138 14 35 chr15 74890185 74890667 -28604307 + MT2C_Mm LTR ERVL 1 472 -3 5 1156 1222 205 0 0 chr15 74890669 74890903 -28604071 - ORR1A3 LTR MaLR -92 234 1 5 1156 294 270 92 35 chr15 74891018 74891160 -28603814 + MLT1B LTR MaLR 103 252 -138 5 1156 224 213 227 0 chr15 74891204 74891279 -28603695 - B1_Mus2 SINE Alu -55 92 1 5 1156 387 300 55 30 chr15 74891352 74891589 -28603385 + L1M4 LINE L1 4266 4508 -1638 5 1156 30 27 0 0 chr15 74891613 74891650 -28603324 + AT_rich Low_complexity Low_complexity 1 37 0 5 1156 408 261 60 43 chr15 74891651 74891767 -28603207 - RSINE1 SINE B4 -1 164 47 5 1156 266 289 0 13 chr15 74891768 74891817 -28603157 + polypurine Low_complexity Low_complexity 2 49 0 5 1156 977 123 0 6 chr15 74891817 74891997 -28602977 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 5 1156 266 289 0 13 chr15 74891997 74892024 -28602950 + polypurine Low_complexity Low_complexity 50 76 0 5 1156 351 289 73 16 chr15 74892072 74892195 -28602779 + ID_B1 SINE B4 94 223 -1 5 1156 266 0 29 0 chr15 74892196 74892230 -28602744 + (CAAAAA)n Simple_repeat Simple_repeat 3 37 0 5 1156 231 290 119 36 chr15 74892251 74892419 -28602555 + L1M4 LINE L1 4806 4987 -1159 5 1156 239 225 24 24 chr15 74892972 74893049 -28601925 + PB1D10 SINE Alu 4 80 -37 5 1156 261 342 9 0 chr15 74893049 74893163 -28601811 + B4A SINE B4 2 116 -176 5 1156 404 294 123 21 chr15 74893194 74893430 -28601544 - L1MB5 LINE L1 -125 6049 5790 5 1156 1105 270 68 22 chr15 74893744 74894086 -28600888 + RMER5 LTR ERV1 69 433 -101 5 1156 1843 176 14 91 chr15 74894086 74894447 -28600527 + RMER10B LTR ERVL 1 335 -63 5 1156 480 35 0 0 chr15 74894447 74894505 -28600469 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 1156 1843 176 14 91 chr15 74894505 74894574 -28600400 + RMER10B LTR ERVL 336 397 -1 5 1156 1105 270 68 22 chr15 74894574 74894675 -28600299 + RMER5 LTR ERV1 434 532 -2 5 1156 1154 189 29 52 chr15 74895537 74896081 -28598893 - RMER17C LTR ERVK 0 410 1 5 1156 18912 55 1 2 chr15 74896580 74899636 -28595338 - L1Md_F2 LINE L1 0 6582 3529 5 1156 463 302 0 0 chr15 74903416 74903542 -28591432 - B3 SINE B2 -88 128 3 5 1156 633 256 34 94 chr15 74903552 74903785 -28591189 - B4 SINE B4 -70 222 4 5 1156 251 337 80 34 chr15 74903845 74904109 -28590865 - B4A SINE B4 -15 277 2 5 1156 422 254 104 7 chr15 74904129 74904264 -28590710 - B1F SINE Alu -1 148 1 5 1156 2889 109 30 2 chr15 74904360 74904792 -28590182 + L1_Mus1 LINE L1 6124 6567 0 5 1156 706 267 49 31 chr15 74906242 74906523 -28588451 + RLTR18B LTR ERVK 178 569 -47 5 1156 548 40 13 0 chr15 74906567 74906642 -28588332 + (CA)n Simple_repeat Simple_repeat 2 77 0 5 1156 703 197 14 7 chr15 74907073 74907216 -28587758 + RLTR33 LTR ERVK 200 343 -335 5 1156 837 116 96 13 chr15 74907432 74907589 -28587385 + RLTR33 LTR ERVK 8 177 -501 5 1156 1013 216 32 122 chr15 74907598 74907828 -28587146 - RMER16 LTR ERVK 0 533 343 5 1156 1140 69 0 0 chr15 74907828 74907973 -28587001 - B1_Mm SINE Alu -1 146 2 5 1156 1013 169 19 116 chr15 74907973 74908145 -28586829 - RMER16 LTR ERVK -191 342 1 5 1156 844 146 0 19 chr15 74908145 74908296 -28586678 + RLTR33 LTR ERVK 181 328 -350 5 1156 589 268 47 0 chr15 74908561 74908688 -28586286 + ETnERV2-int LTR ERVK 7070 7202 -204 5 1156 2875 86 30 16 chr15 74909129 74909302 -28585672 + MusHAL1 LINE L1 341 511 -2843 5 1156 3121 77 5 2 chr15 74909302 74909719 -28585255 - BGLII LTR ERVK 0 421 4 5 1156 5217 82 48 4 chr15 74909719 74910664 -28584310 + MusHAL1 LINE L1 512 1503 -1850 5 1156 719 181 0 0 chr15 74910684 74910811 -28584163 + B1_Mur4 SINE Alu 23 149 -1 6 1156 19459 140 9 5 chr15 74910819 74913784 -28581190 + MERVL-int LTR ERVL 1999 4977 -508 6 1156 4264 105 24 10 chr15 74913784 74914672 -28580302 - L1_Mus3 LINE L1 -588 6470 5228 6 1156 3389 116 15 47 chr15 74914673 74915240 -28579734 + L1_Mus3 LINE L1 6112 6638 0 6 1156 2484 127 5 62 chr15 74915460 74915879 -28579095 + MERVL_2A-int LTR ERVL 5077 5471 -290 6 1156 228 152 14 57 chr15 74915879 74915905 -28579069 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 6 1156 943 132 0 7 chr15 74915905 74916050 -28578924 - B1_Mm SINE Alu -1 146 3 6 1156 228 152 14 57 chr15 74916050 74916093 -28578881 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 6 1156 876 139 14 27 chr15 74916096 74916244 -28578730 - B1_Mus1 SINE Alu 0 148 3 6 1156 843 10 0 0 chr15 74916269 74916365 -28578609 + (TTTC)n Simple_repeat Simple_repeat 2 97 0 6 1156 216 171 0 0 chr15 74916366 74916407 -28578567 + CT-rich Low_complexity Low_complexity 2 42 0 6 1156 347 176 327 18 chr15 74916407 74916517 -28578457 - B1_Mus1 SINE Alu 0 148 5 6 1156 222 118 0 0 chr15 74916545 74916579 -28578395 + (TATG)n Simple_repeat Simple_repeat 2 35 0 6 1156 186 171 0 0 chr15 74916625 74916666 -28578308 + CT-rich Low_complexity Low_complexity 2 42 0 6 1156 289 267 109 51 chr15 74916674 74916812 -28578162 - B1_Mm SINE Alu -1 146 1 6 1156 274 246 0 0 chr15 74916892 74916961 -28578013 + B1_Mur4 SINE Alu 42 110 -40 6 1156 22 70 0 0 chr15 74916979 74917022 -28577952 + AT_rich Low_complexity Low_complexity 1 43 0 6 1156 328 179 0 60 chr15 74917381 74917476 -28577498 - RLTR11A LTR ERVK -53 474 386 6 1156 336 125 137 14 chr15 74917526 74917599 -28577375 + MERVL_2A-int LTR ERVL 5548 5629 -132 6 1156 257 181 26 53 chr15 74917599 74917675 -28577299 + ORR1A3-int LTR MaLR 567 640 -1323 6 1156 288 54 0 0 chr15 74917676 74917713 -28577261 + MERVL-int LTR ERVL 5449 5485 0 6 1156 2724 137 31 36 chr15 74917713 74918190 -28576784 + MT2C_Mm LTR ERVL 1 475 0 6 1156 1204 198 4 0 chr15 74918190 74918422 -28576552 - ORR1A4 LTR MaLR -96 233 1 6 1156 351 309 81 24 chr15 74918483 74918692 -28576282 + MLT1B LTR MaLR 32 252 -138 6 1156 234 200 236 9 chr15 74918707 74918736 -28576238 - ID_B1 SINE B4 -15 209 82 6 1156 242 213 213 0 chr15 74918736 74918811 -28576163 - PB1D10 SINE Alu -26 91 1 6 1156 426 284 89 17 chr15 74918899 74919135 -28575839 + L1M4 LINE L1 4283 4535 -1611 6 1156 38 0 0 0 chr15 74919136 74919174 -28575800 + AT_rich Low_complexity Low_complexity 1 38 0 6 1156 390 243 119 55 chr15 74919177 74919286 -28575688 - RSINE1 SINE B4 -3 162 47 6 1156 340 0 0 77 chr15 74919314 74919379 -28575595 + (GGGA)n Simple_repeat Simple_repeat 4 63 0 6 1156 407 274 81 0 chr15 74919440 74919564 -28575410 + ID_B1 SINE B4 91 224 0 6 1156 224 30 30 0 chr15 74919566 74919599 -28575375 + (CAAAA)n Simple_repeat Simple_repeat 3 36 0 6 1156 26 30 0 0 chr15 74919866 74919899 -28575075 + AT_rich Low_complexity Low_complexity 1 33 0 6 1156 1154 44 0 0 chr15 74920245 74920382 -28574592 + B1_Mus1 SINE Alu 5 141 -7 6 1156 411 73 0 0 chr15 74920386 74920441 -28574533 + (A)n Simple_repeat Simple_repeat 1 55 0 6 1156 239 225 24 24 chr15 74920638 74920715 -28574259 + PB1D10 SINE Alu 4 80 -37 6 1156 267 342 9 0 chr15 74920715 74920829 -28574145 + B4A SINE B4 2 116 -176 6 1156 252 285 146 30 chr15 74920897 74921096 -28573878 - L1MB5 LINE L1 -163 6011 5790 6 1156 863 230 130 25 chr15 74921375 74921736 -28573238 + RMER5 LTR ERV1 33 431 -103 6 1156 1797 177 14 98 chr15 74921738 74922165 -28572809 + RMER10B LTR ERVL 1 391 -7 6 1156 1500 210 3 27 chr15 74922260 74922534 -28572440 + RMER10B LTR ERVL 1 268 -130 6 1156 348 24 0 0 chr15 74922534 74922575 -28572399 + (TC)n Simple_repeat Simple_repeat 1 41 0 6 1156 1500 210 3 27 chr15 74922575 74922638 -28572336 + RMER10B LTR ERVL 269 330 -68 6 1156 468 35 0 0 chr15 74922642 74922700 -28572274 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 1156 455 0 18 0 chr15 74922700 74922755 -28572219 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 6 1156 315 290 20 10 chr15 74922850 74922951 -28572023 + RMER5 LTR ERV1 433 534 0 6 1156 229 273 32 103 chr15 74923005 74923160 -28571814 - RLTR14 LTR ERV1 -14 368 225 6 1156 2928 202 18 38 chr15 74924496 74925103 -28569871 + RMER1B Other Other 463 1057 -9 6 1156 396 0 0 0 chr15 74925263 74925307 -28569667 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1156 3641 34 0 0 chr15 74925371 74925789 -28569185 + L1Md_F2 LINE L1 6142 6559 -23 6 1156 189 0 0 0 chr15 74925789 74925810 -28569164 + (TAA)n Simple_repeat Simple_repeat 1 21 0 6 1156 252 254 15 0 chr15 74926078 74926145 -28568829 + RLTR18 LTR ERVK 2 69 -443 6 1156 290 335 18 83 chr15 74926165 74926334 -28568640 + RLTR18 LTR ERVK 113 270 -346 6 1156 408 268 78 12 chr15 74926430 74926596 -28568378 + RLTR18B LTR ERVK 193 369 -143 6 1156 32 0 0 0 chr15 74926599 74926631 -28568343 + AT_rich Low_complexity Low_complexity 1 32 0 6 1156 230 222 0 18 chr15 74926631 74926686 -28568288 + RLTR18B LTR ERVK 371 424 -88 6 1156 741 87 35 9 chr15 74927043 74927159 -28567815 - MTB_Mm LTR MaLR 0 400 282 6 1156 4754 85 36 29 chr15 74927162 74927966 -28567008 + RLTR13C2 LTR ERVK 1 983 0 6 1156 1886 78 35 17 chr15 74927966 74928251 -28566723 - MTB_Mm LTR MaLR -117 290 1 6 1156 6475 127 9 70 chr15 74928251 74929420 -28565554 - MTB_Mm-int LTR MaLR 0 1098 1 6 1156 1265 124 50 0 chr15 74929420 74929622 -28565352 - MTB_Mm LTR MaLR 0 400 189 6 1156 2512 81 17 64 chr15 74929622 74930031 -28564943 - RLTR1B LTR ERV1 0 512 123 6 1156 27854 81 6 17 chr15 74930031 74934585 -28560389 - L1Md_F LINE L1 -1052 4831 355 6 1156 1882 87 7 14 chr15 74934581 74934698 -28560276 - MusHAL1 LINE L1 -2726 628 513 6 1156 2966 89 12 2 chr15 74934698 74935115 -28559859 + BGLII LTR ERVK 1 421 0 6 1156 1882 87 7 14 chr15 74935115 74935287 -28559687 - MusHAL1 LINE L1 -2842 512 341 6 1156 212 246 0 0 chr15 74935485 74935550 -28559424 + T-rich Low_complexity Low_complexity 1 65 0 6 1156 401 186 80 95 chr15 74935550 74935565 -28559409 - ID_B1 SINE B4 0 224 90 6 1156 691 64 33 98 chr15 74935565 74935687 -28559287 - B1_Mm SINE Alu -25 122 9 6 1156 812 155 0 20 chr15 74935807 74935958 -28559016 - RLTR33 LTR ERVK -350 328 181 6 1156 952 189 18 103 chr15 74935958 74936132 -28558842 + RMER16 LTR ERVK 1 343 -190 6 1156 1000 111 7 0 chr15 74936132 74936276 -28558698 + B1_Mm SINE Alu 3 147 0 6 1156 952 222 33 107 chr15 74936276 74936498 -28558476 + RMER16 LTR ERVK 344 533 0 6 1156 865 129 85 12 chr15 74936507 74936672 -28558302 - RLTR33 LTR ERVK -501 177 1 6 1156 671 226 59 27 chr15 74936854 74937040 -28557934 - RLTR33 LTR ERVK -325 353 162 6 1156 210 136 0 0 chr15 74937417 74937461 -28557513 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1156 674 257 52 30 chr15 74937505 74937770 -28557204 - RLTR18B LTR ERVK -47 569 193 6 1156 272 325 12 61 chr15 74937856 74938020 -28556954 - RLTR18 LTR ERVK -334 282 127 6 1156 510 260 6 28 chr15 74939287 74939428 -28555546 + B1F SINE Alu 7 148 -1 6 1156 250 358 0 69 chr15 74939299 74939443 -28555531 + B4A SINE B4 103 236 -56 6 1156 297 345 68 30 chr15 74939452 74939715 -28555259 + B4A SINE B4 5 277 -15 6 1156 622 290 23 81 chr15 74939775 74940017 -28554957 + B4 SINE B4 4 230 -62 6 1156 440 296 7 43 chr15 74940017 74940155 -28554819 + B3 SINE B2 1 133 -83 6 1156 495 0 0 0 chr15 74940262 74940317 -28554657 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1156 504 116 11 23 chr15 74942732 74942820 -28552154 - B1_Mur3 SINE Alu 0 149 63 6 1156 1086 90 7 0 chr15 74944198 74944343 -28550631 + B1_Mm SINE Alu 1 146 -1 6 1156 2455 125 44 15 chr15 74944695 74945100 -28549874 + RLTR9B2 LTR ERVK 1 417 -3 6 1156 1690 197 34 64 chr15 74945992 74946482 -28548492 + RMER17C LTR ERVK 1 486 -420 6 1156 370 290 18 94 chr15 74947129 74947300 -28547674 + RLTR14 LTR ERV1 225 382 0 6 1156 1354 261 74 29 chr15 74947340 74947445 -28547529 - RMER5 LTR ERV1 0 534 434 6 1156 1644 206 17 42 chr15 74947445 74947590 -28547384 - RMER10B LTR ERVL 0 398 256 6 1156 591 40 0 0 chr15 74947590 74947664 -28547310 + (GA)n Simple_repeat Simple_repeat 1 74 0 6 1156 1644 206 17 42 chr15 74947664 74947924 -28547050 - RMER10B LTR ERVL -143 255 3 6 1156 1354 261 74 29 chr15 74947924 74948264 -28546710 - RMER5 LTR ERV1 -101 433 69 6 1156 462 289 117 28 chr15 74948579 74948828 -28546146 + L1MB5 LINE L1 5790 6060 -114 6 1156 317 333 9 0 chr15 74948846 74948960 -28546014 - B4A SINE B4 -176 116 2 6 1156 264 225 24 24 chr15 74948960 74949037 -28545937 - PB1D10 SINE Alu -37 80 4 6 1156 182 116 23 0 chr15 74949558 74949601 -28545373 + (TTTTA)n Simple_repeat Simple_repeat 4 47 0 6 1156 464 258 71 16 chr15 74949838 74949964 -28545010 - ID_B1 SINE B4 -1 223 91 6 1156 24 53 0 0 chr15 74950192 74950230 -28544744 + AT_rich Low_complexity Low_complexity 1 38 0 6 1156 233 312 93 21 chr15 74950231 74950467 -28544507 - L1M4 LINE L1 -1611 4535 4283 6 1156 303 299 116 29 chr15 74950674 74950812 -28544162 - MLT1B LTR MaLR -138 252 103 6 1156 1273 207 4 0 chr15 74950937 74951169 -28543805 + ORR1A4 LTR MaLR 1 233 -96 6 1156 2912 119 27 38 chr15 74951169 74951649 -28543325 - MT2C_Mm LTR ERVL 0 475 1 6 1156 272 81 0 0 chr15 74951649 74951686 -28543288 - MERVL-int LTR ERVL 0 5485 5449 6 1156 274 194 26 53 chr15 74951687 74951763 -28543211 - ORR1A3-int LTR MaLR -1323 640 567 6 1156 2720 141 117 4 chr15 74951763 74952260 -28542714 - MERVL-int LTR ERVL -132 5629 5077 6 1156 22 0 0 0 chr15 74952511 74952533 -28542441 + AT_rich Low_complexity Low_complexity 1 22 0 6 1156 3451 116 16 2 chr15 74952533 74953044 -28541930 - L1_Mus3 LINE L1 -8 6630 6113 6 1156 4341 105 19 10 chr15 74953046 74953926 -28541048 + L1_Mus3 LINE L1 5228 6110 -528 6 1156 20078 131 12 2 chr15 74953926 74956888 -28538086 - MERVL-int LTR ERVL -497 4988 1999 6 1156 778 189 0 0 chr15 74956896 74957023 -28537951 - B1_Mur4 SINE Alu -1 149 23 6 1156 5702 85 12 2 chr15 74957037 74958011 -28536963 - L1VL4 LINE L1 -1858 1701 717 6 1156 3037 86 7 2 chr15 74958011 74958430 -28536544 + BGLII LTR ERVK 1 421 0 6 1156 2904 89 7 16 chr15 74958430 74958603 -28536371 - L1VL4 LINE L1 -5586 716 547 6 1156 868 215 53 57 chr15 74958788 74959047 -28535927 - RLTR33 LTR ERVK -240 438 181 6 1156 1322 147 34 58 chr15 74959047 74959222 -28535752 + RMER16 LTR ERVK 1 345 -188 6 1156 1019 92 0 0 chr15 74959222 74959352 -28535622 + B1_Mm SINE Alu 5 134 -13 7 1156 588 29 0 0 chr15 74959355 74959425 -28535549 + (CAAAA)n Simple_repeat Simple_repeat 2 71 0 7 1156 1322 199 59 22 chr15 74959425 74959603 -28535371 + RMER16 LTR ERVK 346 529 -4 6 1156 890 164 87 12 chr15 74959603 74959776 -28535198 - RLTR33 LTR ERVK -492 186 1 6 1156 802 242 35 40 chr15 74959964 74960166 -28534808 - RLTR33 LTR ERVK -330 348 148 7 1156 321 82 0 0 chr15 74960536 74960585 -28534389 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 1156 682 275 52 29 chr15 74960630 74960895 -28534079 - RLTR18B LTR ERVK -47 569 193 7 1156 282 329 36 77 chr15 74960981 74961149 -28533825 - RLTR18 LTR ERVK -334 282 122 7 1156 393 283 102 8 chr15 74962437 74962565 -28532409 + B1F SINE Alu 1 140 -9 7 1156 239 346 71 34 chr15 74962592 74962858 -28532116 + B4A SINE B4 2 277 -15 7 1156 662 268 26 86 chr15 74962918 74963151 -28531823 + B4 SINE B4 4 222 -70 7 1156 513 308 0 0 chr15 74963161 74963291 -28531683 + B3 SINE B2 3 132 -84 7 1156 903 36 0 0 chr15 74963396 74963507 -28531467 + (CA)n Simple_repeat Simple_repeat 2 112 0 7 1156 558 121 11 21 chr15 74965884 74965977 -28528997 - B1_Mur3 SINE Alu 0 149 58 7 1156 1076 83 14 0 chr15 74967355 74967500 -28527474 + B1_Mm SINE Alu 1 147 0 7 1156 247 304 42 25 chr15 74967525 74967643 -28527331 - RMER15 LTR ERVL -100 475 356 7 1156 1399 153 22 196 chr15 74968770 74968952 -28526022 + RMER17C LTR ERVK 1 180 -230 7 1156 303 28 0 0 chr15 74968952 74968988 -28525986 + (TCCCC)n Simple_repeat Simple_repeat 1 36 0 7 1156 1399 153 22 196 chr15 74968988 74969301 -28525673 + RMER17C LTR ERVK 181 410 0 7 1156 2996 30 0 0 chr15 74969367 74969699 -28525275 - IAPEY3_LTR LTR ERVK 0 332 1 7 1156 251 307 54 96 chr15 74970282 74970448 -28524526 + RLTR14 LTR ERV1 224 382 0 7 1156 1329 276 71 21 chr15 74970488 74970591 -28524383 - RMER5 LTR ERV1 0 534 434 7 1156 1424 171 2 255 chr15 74970591 74970707 -28524267 - RMER10B LTR ERVL 0 398 342 7 1156 312 27 0 0 chr15 74970707 74970744 -28524230 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1156 1424 171 2 255 chr15 74970744 74971160 -28523814 - RMER10B LTR ERVL -57 341 1 7 1156 1329 276 71 21 chr15 74971160 74971534 -28523440 - RMER5 LTR ERV1 -101 433 33 7 1156 394 283 127 24 chr15 74971814 74972059 -28522915 + L1MB5 LINE L1 5790 6056 -122 7 1156 297 345 9 0 chr15 74972080 74972196 -28522778 - B4A SINE B4 -174 118 2 7 1156 257 219 36 24 chr15 74972196 74972275 -28522699 - PB1D10 SINE Alu -37 80 1 7 1156 22 35 0 0 chr15 74972804 74972833 -28522141 + AT_rich Low_complexity Low_complexity 1 29 0 7 1156 513 0 0 0 chr15 74972833 74972890 -28522084 + (TTA)n Simple_repeat Simple_repeat 1 57 0 7 144 281 229 129 0 chr15 74973115 74973185 -28521789 - ID_B1 SINE B4 -4 220 142 7 1157 287 239 114 69 chr15 74973238 74973413 -28521561 - L1M4 LINE L1 -1147 4999 4817 7 1157 212 0 0 35 chr15 74973432 74973461 -28521513 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 7 1157 396 266 77 34 chr15 74973461 74973578 -28521396 - ID_B1 SINE B4 -12 212 91 7 1157 681 47 0 0 chr15 74973649 74973734 -28521240 + (TTCC)n Simple_repeat Simple_repeat 4 88 0 7 1157 438 271 88 53 chr15 74973750 74973863 -28521111 + RSINE1 SINE B4 47 163 -2 7 1157 34 0 0 0 chr15 74973865 74973899 -28521075 + AT_rich Low_complexity Low_complexity 1 34 0 7 1157 481 282 57 14 chr15 74973899 74974158 -28520816 - L1M4 LINE L1 -1612 4534 4266 7 1157 250 213 253 0 chr15 74974231 74974306 -28520668 + B1F2 SINE Alu 1 94 -55 7 1157 394 328 93 19 chr15 74974350 74974555 -28520419 - MLT1B LTR MaLR -138 252 33 7 1157 1331 197 16 0 chr15 74974617 74974849 -28520125 + ORR1A2 LTR MaLR 1 236 -91 7 1157 2865 145 6 33 chr15 74974849 74975328 -28519646 - MT2C_Mm LTR ERVL 0 475 10 7 1157 277 245 54 45 chr15 74975245 74975356 -28519618 - ORR1A3-int LTR MaLR -1258 705 594 7 1157 298 219 13 40 chr15 74975368 74975444 -28519530 - ORR1A3-int LTR MaLR -1323 640 567 7 1157 331 97 65 0 chr15 74975444 74975506 -28519468 - MERVL-int LTR ERVL -132 5629 5564 7 1157 11400 134 39 12 chr15 74975557 74975624 -28519350 - MERVL-int LTR ERVL -128 5357 5300 7 1157 1185 115 60 0 chr15 74975624 74975807 -28519167 - B2_Mm2 SINE B2 -1 194 1 7 1157 11400 134 39 12 chr15 74975807 74977506 -28517468 - MERVL-int LTR ERVL -186 5299 3544 7 1157 9542 118 33 1 chr15 74977508 74978876 -28516098 - MERVL-int LTR ERVL -2075 3410 1999 7 1157 936 124 0 0 chr15 74978895 74979073 -28515901 + (TCC)n Simple_repeat Simple_repeat 3 180 0 7 1157 950 149 14 0 chr15 74979091 74979239 -28515735 - B1_Mur4 SINE Alu 0 150 1 7 1157 222 91 0 0 chr15 74979318 74979351 -28515623 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 7 1157 1744 181 46 35 chr15 74980081 74980444 -28514530 + MTC LTR MaLR 32 391 -30 7 1157 1015 188 20 224 chr15 74980450 74980950 -28514024 + RMER10B LTR ERVL 1 398 0 7 1157 889 284 79 29 chr15 74981013 74981351 -28513623 + ORR1E LTR MaLR 3 366 -8 7 1157 1894 146 129 6 chr15 74981352 74981539 -28513435 - RMER17C LTR ERVK 0 410 214 7 1157 576 0 0 0 chr15 74981539 74981603 -28513371 + (GA)n Simple_repeat Simple_repeat 2 65 0 7 1157 1894 146 129 6 chr15 74981603 74981780 -28513194 - RMER17C LTR ERVK -197 213 2 7 1157 835 235 8 75 chr15 74981789 74982028 -28512946 + Lx9 LINE L1 6952 7174 -470 7 1157 3103 128 17 4 chr15 74982072 74982536 -28512438 + RMER2 LTR ERV1 98 567 0 7 1157 1377 186 65 38 chr15 74982882 74983279 -28511695 - RMER17C LTR ERVK 0 410 3 7 1157 254 282 31 168 chr15 74984428 74984624 -28510350 + RMER15 LTR ERVL 350 518 -57 7 1157 448 195 12 0 chr15 74985288 74985370 -28509604 + B1_Mur3 SINE Alu 58 140 -9 7 1157 399 21 0 0 chr15 74985375 74985423 -28509551 + (CAA)n Simple_repeat Simple_repeat 2 49 0 7 1157 384 22 0 0 chr15 74986950 74986995 -28507979 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 1157 534 209 26 9 chr15 74987991 74988107 -28506867 - B3 SINE B2 -98 118 1 7 1157 624 304 12 87 chr15 74988111 74988352 -28506622 - B4 SINE B4 -66 226 4 7 1157 382 326 68 30 chr15 74988419 74988685 -28506289 - B4A SINE B4 -15 277 2 7 1157 353 280 8 63 chr15 74988710 74988836 -28506138 - PB1D7 SINE Alu -1 119 1 7 1157 2244 185 125 35 chr15 74990089 74990236 -28504738 + RMER1B Other Other 491 662 -404 7 1157 5782 109 15 57 chr15 74990236 74991178 -28503796 + RLTR13D6 LTR ERVK 1 902 0 7 1157 2244 185 125 35 chr15 74991178 74991433 -28503541 + RMER1B Other Other 663 929 -137 7 1157 399 41 0 0 chr15 74991433 74991482 -28503492 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 7 1157 2244 185 125 35 chr15 74991482 74991598 -28503376 + RMER1B Other Other 930 1056 -10 7 1157 663 78 0 0 chr15 74991786 74991889 -28503085 + (CA)n Simple_repeat Simple_repeat 2 104 0 7 1157 338 350 113 55 chr15 74992229 74992486 -28502488 + RLTR18B LTR ERVK 2 273 -239 7 1157 482 286 66 22 chr15 74992568 74992750 -28502224 + RLTR18B LTR ERVK 193 382 -130 7 1157 297 0 0 0 chr15 74992817 74992850 -28502124 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1157 264 30 0 0 chr15 74992850 74992882 -28502092 + (GA)n Simple_repeat Simple_repeat 2 34 0 7 1157 761 200 47 24 chr15 74993268 74993437 -28501537 + RLTR33 LTR ERVK 162 334 -344 7 1157 868 157 85 23 chr15 74993647 74993813 -28501161 + RLTR33 LTR ERVK 8 184 -494 7 1157 1310 178 80 34 chr15 74993813 74994155 -28500819 - RMER16 LTR ERVK 0 533 1 7 1157 713 111 0 41 chr15 74994155 74994274 -28500700 + RLTR33 LTR ERVK 181 294 -384 7 1157 9049 168 71 12 chr15 74994274 74996033 -28498941 + L1_Mm LINE L1 3886 5748 -135 7 1157 369 194 14 14 chr15 74996233 74996306 -28498668 - RMER5 LTR ERV1 0 534 462 7 1157 1984 181 11 94 chr15 74996333 74996767 -28498207 - RMER10B LTR ERVL 0 398 1 7 1157 1048 234 127 17 chr15 74996767 74997128 -28497846 - RMER5 LTR ERV1 -101 433 33 7 1157 400 303 123 21 chr15 74997407 74997643 -28497331 + L1MB5 LINE L1 5790 6049 -125 7 1157 311 342 9 0 chr15 74997674 74997788 -28497186 - B4A SINE B4 -176 116 2 7 1157 257 219 36 24 chr15 74997788 74997867 -28497107 - PB1D10 SINE Alu -37 80 1 7 1157 11090 23 5 29 chr15 74998394 75000000 -28494974 + L1Md_A LINE L1 1 1563 -4320 7 1157 35741 9 1 0 chr15 75000000 75004018 -28490956 + L1Md_A LINE L1 1564 5586 -297 1 1157 8898 16 2 0 chr15 75004018 75005012 -28489962 + L1Md_A LINE L1 5587 6582 0 1 1157 410 0 20 0 chr15 75005052 75005102 -28489872 + (TTA)n Simple_repeat Simple_repeat 2 52 0 2 1157 424 198 104 0 chr15 75005328 75005434 -28489540 - ID_B1 SINE B4 -4 220 104 3 1157 206 279 0 29 chr15 75005479 75005549 -28489425 + CT-rich Low_complexity Low_complexity 2 69 0 4 1157 328 294 92 0 chr15 75005550 75005659 -28489315 + RSINE1 SINE B4 47 165 0 5 1157 34 0 0 0 chr15 75005664 75005698 -28489276 + AT_rich Low_complexity Low_complexity 1 34 0 6 1157 395 268 95 13 chr15 75005723 75005919 -28489055 - L1M4 LINE L1 -1636 4504 4273 7 1157 17758 124 29 8 chr15 75006179 75008118 -28486856 - MERVL-int LTR ERVL -790 4695 2712 8 1157 462 18 0 0 chr15 75008118 75008173 -28486801 + (TG)n Simple_repeat Simple_repeat 2 56 0 9 1157 17758 124 29 8 chr15 75008173 75008201 -28486773 - MERVL-int LTR ERVL -2774 2711 2695 8 1157 1103 95 7 0 chr15 75008201 75008348 -28486626 + B1_Mus1 SINE Alu 1 148 0 1 1157 17758 124 29 8 chr15 75008348 75009021 -28485953 - MERVL-int LTR ERVL -2791 2694 1999 8 1157 885 168 14 0 chr15 75009033 75009176 -28485798 - B1_Mur4 SINE Alu -5 145 1 1 1157 600 317 63 42 chr15 75009503 75009815 -28485159 + ORR1E LTR MaLR 29 369 -10 1 1157 1739 188 66 0 chr15 75009822 75010200 -28484774 - RMER17C LTR ERVK -7 403 1 1 1157 747 250 0 76 chr15 75010209 75010434 -28484540 + Lx9 LINE L1 6952 7159 -485 1 1157 203 343 0 0 chr15 75010565 75010635 -28484339 + GA-rich Low_complexity Low_complexity 1 70 0 1 1157 1083 244 63 28 chr15 75010911 75011273 -28483701 + Lx9 LINE L1 7206 7580 -64 1 1157 1505 162 53 53 chr15 75011289 75011720 -28483254 + RMER17C LTR ERVK 16 440 -518 1 1157 29 0 0 0 chr15 75011748 75011777 -28483197 + AT_rich Low_complexity Low_complexity 1 29 0 1 1157 520 197 17 8 chr15 75012495 75012613 -28482361 - RLTR22_Mur LTR ERVK -140 1708 1590 1 1157 557 276 91 34 chr15 75012665 75012841 -28482133 + B3 SINE B2 1 186 -30 1 1157 1073 138 50 6 chr15 75012939 75013121 -28481853 + B2_Mm2 SINE B2 2 191 -4 2 1157 1255 104 32 16 chr15 75013124 75013310 -28481664 + B2_Mm2 SINE B2 2 190 -5 2 1157 450 248 97 76 chr15 75013721 75013865 -28481109 + B1_Mur2 SINE Alu 3 149 0 2 1157 394 246 26 26 chr15 75013933 75014050 -28480924 + RLTR23 LTR ERV1 314 430 0 2 1157 403 173 0 26 chr15 75014255 75014332 -28480642 + B1_Mur3 SINE Alu 75 149 0 2 1157 2557 107 3 37 chr15 75014480 75014858 -28480116 + RLTR8 LTR ERVK 1 365 0 2 1157 3465 133 23 18 chr15 75015695 75016255 -28478719 + RMER2 LTR ERV1 5 567 0 2 1157 770 228 56 28 chr15 75016579 75016938 -28478036 - RMER17C LTR ERVK -8 402 1 2 1157 329 260 30 68 chr15 75017832 75017946 -28477028 - RLTR9A LTR ERVK 0 368 260 2 1157 2686 121 22 59 chr15 75017946 75018091 -28476883 + MT2C_Mm LTR ERVL 1 141 -334 2 1157 4675 109 115 54 chr15 75018091 75018941 -28476033 + RMER17A2 LTR ERVK 1 902 -4 3 1157 2686 121 22 59 chr15 75018941 75019288 -28475686 + MT2C_Mm LTR ERVL 142 475 0 2 1157 1312 188 4 0 chr15 75019288 75019520 -28475454 - ORR1A4 LTR MaLR -96 233 1 3 1157 469 272 97 19 chr15 75019579 75019785 -28475189 + MLT1B LTR MaLR 31 252 -138 3 1157 337 323 66 31 chr15 75019988 75020244 -28474730 + L1M3 LINE L1 4273 4537 -1603 3 1157 479 245 66 0 chr15 75020289 75020395 -28474579 - RSINE1 SINE B4 -6 159 47 3 1157 478 254 73 9 chr15 75020469 75020623 -28474351 + ID_B1 SINE B4 72 224 0 3 1157 306 0 0 0 chr15 75020623 75020657 -28474317 + (CAAAA)n Simple_repeat Simple_repeat 5 38 0 3 1157 828 80 0 0 chr15 75020665 75020778 -28474196 + (GAAAA)n Simple_repeat Simple_repeat 3 115 0 3 1157 257 323 74 12 chr15 75020812 75020975 -28473999 + L1M3 LINE L1 4817 4989 -1157 3 1157 198 0 0 0 chr15 75021141 75021163 -28473811 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 3 1157 258 238 24 24 chr15 75021552 75021629 -28473345 + PB1D10 SINE Alu 4 80 -37 3 1157 274 342 9 0 chr15 75021629 75021740 -28473234 + B4A SINE B4 2 113 -179 4 1157 3062 86 0 0 chr15 75021805 75022235 -28472739 - MusHAL1 LINE L1 -1183 1529 1100 4 1157 366 23 0 0 chr15 75022544 75022587 -28472387 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1157 2078 271 82 31 chr15 75022721 75023403 -28471571 - RMER1B Other Other -18 1048 13 4 1157 592 245 13 26 chr15 75024660 75024811 -28470163 + B1F SINE Alu 1 149 0 4 1157 452 347 31 22 chr15 75024827 75025051 -28469923 + B4A SINE B4 2 227 -65 4 1157 3164 248 43 35 chr15 75025074 75026024 -28468950 + RMER17B LTR ERVK 1 958 0 4 1157 401 268 22 52 chr15 75026112 75026246 -28468728 + B4A SINE B4 4 133 -159 4 1157 426 39 0 0 chr15 75026317 75026369 -28468605 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1157 15051 124 57 25 chr15 75028332 75030841 -28464133 - RMER16-int LTR ERVK -1252 4154 1566 4 1157 4908 66 1 37 chr15 75030896 75031571 -28463403 + L1Md_F2 LINE L1 5931 6581 -1 5 1157 16018 122 43 8 chr15 75031849 75032922 -28462052 - MERVL-int LTR ERVL -995 4490 3361 5 1157 4935 104 114 15 chr15 75032922 75033729 -28461245 + RMER17D LTR ERVK 1 887 -2 5 1157 16018 122 43 8 chr15 75033729 75035062 -28459912 - MERVL-int LTR ERVL -2125 3360 1999 5 1157 580 156 131 0 chr15 75035072 75035194 -28459780 - B1_Mur4 SINE Alu 0 150 13 5 1157 3005 24 0 0 chr15 75036090 75036427 -28458547 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 1157 56580 20 17 7 chr15 75036427 75042836 -28452138 - IAPEz-int LTR ERVK 0 6481 8 5 1157 3029 18 0 0 chr15 75042836 75043173 -28451801 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 1157 1534 157 4 4 chr15 75043176 75043439 -28451535 + MTC LTR MaLR 104 366 -55 5 1157 1264 216 28 107 chr15 75043539 75043969 -28451005 + RMER10B LTR ERVL 3 398 0 5 1157 741 331 45 17 chr15 75044055 75044344 -28450630 + ORR1E LTR MaLR 27 323 -36 5 1157 1889 171 0 95 chr15 75044370 75044823 -28450151 - RMER17C LTR ERVK 0 410 1 5 1157 498 269 53 57 chr15 75044832 75045041 -28449933 + Lx9 LINE L1 6952 7159 -485 5 1157 306 299 152 47 chr15 75045052 75045414 -28449560 - RMER10A LTR ERVL -25 417 18 6 1157 918 253 141 16 chr15 75045518 75045887 -28449087 + Lx9 LINE L1 7203 7617 -27 5 1157 30 0 0 0 chr15 75045891 75045921 -28449053 + AT_rich Low_complexity Low_complexity 1 30 0 6 1157 523 246 8 23 chr15 75048999 75049128 -28445846 - B3 SINE B2 -88 128 2 6 1157 563 288 26 48 chr15 75049131 75049361 -28445613 - B4 SINE B4 -64 228 4 6 1157 3281 228 40 19 chr15 75049477 75049917 -28445057 - RMER17B LTR ERVK -73 885 430 6 1157 906 122 0 0 chr15 75049917 75050097 -28444877 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 1157 3281 228 40 19 chr15 75050097 75050522 -28444452 - RMER17B LTR ERVK -529 429 2 6 1157 465 371 22 13 chr15 75050545 75050769 -28444205 - B4A SINE B4 -65 227 2 6 1157 506 267 20 27 chr15 75050785 75050935 -28444039 - B1F SINE Alu 0 149 1 6 1157 2908 206 15 33 chr15 75052471 75053078 -28441896 + RMER1B Other Other 462 1057 -9 6 1157 603 0 0 0 chr15 75053211 75053278 -28441696 + (GA)n Simple_repeat Simple_repeat 2 68 0 6 1157 282 330 90 49 chr15 75053617 75053890 -28441084 + RLTR18 LTR ERVK 2 288 -328 7 1157 490 283 56 52 chr15 75053955 75054205 -28440769 + RLTR18B LTR ERVK 182 432 -80 7 1157 874 54 17 46 chr15 75054294 75054469 -28440505 + (GAGAA)n Simple_repeat Simple_repeat 5 174 0 7 1157 871 343 49 57 chr15 75054767 75055708 -28439266 + MuRRS4-int LTR ERV1 1581 2513 -5265 7 1157 1106 255 34 40 chr15 75055740 75055786 -28439188 + MuRRS4-int LTR ERV1 3691 3732 -1331 7 1157 6257 59 33 3 chr15 75055786 75056570 -28438404 - RLTR13C2 LTR ERVK 0 808 1 7 1157 1117 255 34 40 chr15 75056570 75056850 -28438124 + MuRRS4-int LTR ERV1 3733 4015 -1048 7 1157 253 360 0 0 chr15 75057065 75057154 -28437820 + RLTR6-int LTR ERV1 5611 5699 -2079 7 1157 4931 43 3 5 chr15 75057176 75057764 -28437210 + LTRIS_Mus LTR ERV1 1 587 0 7 1157 664 323 11 11 chr15 75058316 75058582 -28436392 + RLTR6-int LTR ERV1 7447 7712 -66 7 1157 2476 111 124 0 chr15 75058680 75059131 -28435843 + RLTR47_MM LTR ERV1 1 507 -25 7 1157 417 248 17 76 chr15 75059638 75059756 -28435218 + ORR1E LTR MaLR 1 111 -248 7 1157 291 218 147 16 chr15 75059838 75059949 -28435025 + ORR1E LTR MaLR 240 359 -20 7 1157 5044 75 5 1 chr15 75060426 75061077 -28433897 + L1Md_F2 LINE L1 5926 6578 -4 7 1157 816 190 18 41 chr15 75061487 75061657 -28433317 - RLTR33 LTR ERVK -350 328 163 8 1157 1269 204 73 26 chr15 75061646 75061981 -28432993 + RMER16 LTR ERVK 9 533 0 8 1157 779 171 93 44 chr15 75061981 75062156 -28432818 - RLTR33 LTR ERVK -494 184 1 8 1157 818 209 12 37 chr15 75062337 75062501 -28432473 - RLTR33 LTR ERVK -322 356 197 8 1157 456 19 0 0 chr15 75062914 75062967 -28432007 + (TG)n Simple_repeat Simple_repeat 2 54 0 8 1157 582 278 75 29 chr15 75062997 75063260 -28431714 - RLTR18B LTR ERVK -44 572 193 8 1157 292 371 11 66 chr15 75063342 75063524 -28431450 - RLTR18 LTR ERVK -330 286 115 8 1157 369 0 0 0 chr15 75063956 75063997 -28430977 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1157 2777 208 8 72 chr15 75064141 75064768 -28430206 - RMER1B Other Other -18 1048 462 8 1157 616 219 20 33 chr15 75066363 75066514 -28428460 + B1F SINE Alu 1 149 0 8 1157 401 384 49 15 chr15 75066530 75066797 -28428177 + B4A SINE B4 2 277 -15 8 1157 654 328 23 60 chr15 75066859 75067096 -28427878 + B4 SINE B4 5 231 -61 9 1157 630 229 0 0 chr15 75067096 75067214 -28427760 + B3 SINE B2 1 118 -98 9 1157 588 14 0 0 chr15 75067328 75067397 -28427577 + (CA)n Simple_repeat Simple_repeat 1 69 0 9 1157 510 200 9 95 chr15 75069800 75069916 -28425058 - B1_Mur3 SINE Alu -3 146 41 9 1157 228 344 36 65 chr15 75070391 75070559 -28424415 - RMER15 LTR ERVL -54 521 359 9 1157 1386 213 45 28 chr15 75071724 75072124 -28422850 + RMER17C LTR ERVK 4 410 0 9 1157 684 282 52 26 chr15 75072541 75072774 -28422200 - RLTR18B LTR ERVK -80 432 194 9 1157 2604 80 19 139 chr15 75072820 75073083 -28421891 - RLTR9F LTR ERVK -4 411 172 9 1157 932 58 224 31 chr15 75073083 75073244 -28421730 + B2_Mm2 SINE B2 1 192 -3 9 1157 2604 80 19 139 chr15 75073244 75073447 -28421527 - RLTR9F LTR ERVK -244 171 1 9 1157 278 313 16 95 chr15 75073494 75073762 -28421212 - RLTR18B LTR ERVK -334 282 2 9 1157 597 14 0 0 chr15 75074107 75074177 -28420797 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 1157 2320 201 67 17 chr15 75074270 75074750 -28420224 - RMER1B Other Other -9 1057 554 1 1157 609 260 14 0 chr15 75075909 75076055 -28418919 + B1F SINE Alu 1 148 -1 1 1157 435 366 84 27 chr15 75076070 75076331 -28418643 + B4A SINE B4 2 277 -15 1 1157 537 311 16 119 chr15 75076392 75076644 -28418330 + B4A SINE B4 4 229 -63 1 1157 523 196 46 9 chr15 75076646 75076754 -28418220 + B3 SINE B2 1 112 -104 1 1157 524 24 49 0 chr15 75076878 75076960 -28418014 + (CA)n Simple_repeat Simple_repeat 2 87 0 1 1157 496 0 31 0 chr15 75076960 75077024 -28417950 + (CCA)n Simple_repeat Simple_repeat 3 68 0 1 1157 509 184 11 0 chr15 75078808 75078895 -28416079 + RMER17C LTR ERVK 1 88 -322 1 1157 309 182 14 70 chr15 75078890 75078961 -28416013 - RLTR25A LTR ERVK -512 591 525 1 1157 942 133 93 0 chr15 75078909 75079059 -28415915 - MT2B LTR ERVL -344 257 94 1 1157 4515 138 13 56 chr15 75078972 75079101 -28415873 - ORR1A2-int LTR MaLR -1205 758 631 1 1157 1214 98 16 37 chr15 75079101 75079291 -28415683 + B2_Mm2 SINE B2 2 187 -8 1 1157 4515 138 13 56 chr15 75079291 75079305 -28415669 - ORR1A3-int LTR MaLR -1333 630 630 1 1157 189 0 0 0 chr15 75079305 75079326 -28415648 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 1157 4515 138 13 56 chr15 75079326 75079973 -28415001 - ORR1A2-int LTR MaLR -1333 630 1 1 1157 1722 102 75 0 chr15 75079973 75080228 -28414746 - ORR1A2 LTR MaLR 0 327 54 1 1157 297 109 0 0 chr15 75080260 75080306 -28414668 + (TCC)n Simple_repeat Simple_repeat 2 47 0 1 1157 360 0 0 0 chr15 75080690 75080730 -28414244 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1 1157 294 29 0 0 chr15 75080730 75080765 -28414209 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1 1157 881 240 11 17 chr15 75080789 75080967 -28414007 - B3 SINE B2 -29 187 11 1 1157 516 179 17 59 chr15 75081025 75081144 -28413830 + RLTR22_Mur LTR ERVK 1592 1705 -143 1 1157 409 230 188 35 chr15 75081587 75081731 -28413243 - RLTR6-int LTR ERV1 0 7778 7613 1 1157 4386 233 33 39 chr15 75081720 75083255 -28411719 - MMVL30-int LTR ERV1 -790 4273 2757 1 1157 1259 180 50 20 chr15 75083330 75083592 -28411382 - MMVL30-int LTR ERV1 -1926 1772 1516 1 1157 450 0 0 0 chr15 75083768 75083818 -28411156 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 1157 282 158 0 0 chr15 75083927 75083984 -28410990 - MMVL30-int LTR ERV1 -2187 1511 1455 1 1157 441 0 0 0 chr15 75084345 75084394 -28410580 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 1 1157 347 238 60 0 chr15 75084469 75084553 -28410421 - MMVL30-int LTR ERV1 -2251 1447 1359 1 1157 235 254 0 31 chr15 75084711 75084776 -28410198 + (CACCT)n Simple_repeat Simple_repeat 1 63 0 1 1157 486 231 0 103 chr15 75084823 75084968 -28410006 - MMVL30-int LTR ERV1 -2725 973 844 1 1157 286 88 0 136 chr15 75085051 75085117 -28409857 - MMVL30-int LTR ERV1 -2870 828 772 1 1157 363 60 0 0 chr15 75085500 75085550 -28409424 + (CAGA)n Simple_repeat Simple_repeat 2 51 0 1 1157 3331 43 2 17 chr15 75085895 75086297 -28408677 + MTA_Mm LTR MaLR 1 396 0 1 1157 8480 65 12 2 chr15 75086297 75087384 -28407590 + MTA_Mm-int LTR MaLR 1 1098 0 1 1157 2943 36 85 0 chr15 75087384 75087747 -28407227 + MTA_Mm LTR MaLR 1 394 -2 1 1157 2809 117 2 5 chr15 75087938 75088343 -28406631 + MERVL-int LTR ERVL 2538 2941 -2544 1 1157 8913 133 9 10 chr15 75088341 75088477 -28406497 + MERVL-int LTR ERVL 3171 3313 -2172 1 1157 3185 12 0 0 chr15 75088477 75088823 -28406151 - ORR1A0 LTR MaLR 0 346 1 1 1157 14691 46 1 2 chr15 75088823 75090616 -28404358 - ORR1A0-int LTR MaLR 0 1792 1 1 1157 3150 17 0 0 chr15 75090616 75090962 -28404012 - ORR1A0 LTR MaLR 0 346 1 1 1157 8913 133 9 10 chr15 75090962 75092144 -28402830 + MERVL-int LTR ERVL 3314 4488 -997 1 1157 306 228 9 65 chr15 75092157 75092265 -28402709 + RLTR45-int LTR ERVK 3484 3585 -3659 1 1157 15641 128 44 16 chr15 75092501 75092758 -28402216 + RMER16-int LTR ERVK 1565 1821 -3585 1 1157 903 87 0 0 chr15 75092758 75092884 -28402090 + (GAAA)n Simple_repeat Simple_repeat 3 128 0 1 1157 15641 128 44 16 chr15 75092884 75095174 -28399800 + RMER16-int LTR ERVK 1822 4181 -1225 1 1157 301 252 55 64 chr15 75095176 75095286 -28399688 + ETnERV2-int LTR ERVK 6097 6205 -1201 1 1157 266 309 70 45 chr15 75095526 75095682 -28399292 + ETnERV2-int LTR ERVK 6361 6520 -22 1 1157 859 234 12 72 chr15 75095786 75096160 -28398814 - RMER17C LTR ERVK -370 536 1 1 1157 310 318 70 25 chr15 75096872 75097030 -28397944 + RMER15 LTR ERVL 357 521 -54 1 1157 345 178 14 14 chr15 75098424 75098498 -28396476 + B1_Mus2 SINE Alu 74 147 0 1 1157 184 91 22 22 chr15 75100934 75100979 -28393995 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1157 583 269 31 0 chr15 75101086 75101216 -28393758 - B3A SINE B2 -64 134 1 1 1157 671 293 28 83 chr15 75101216 75101458 -28393516 - B4 SINE B4 -61 231 4 1 1157 413 324 64 30 chr15 75101520 75101787 -28393187 - B4A SINE B4 -15 277 2 1 1157 526 250 57 0 chr15 75101808 75101948 -28393026 - B1F SINE Alu -1 148 1 1 1157 278 289 0 11 chr15 75103414 75103505 -28391469 + MuLV-int LTR ERV1 2359 2448 -5108 1 1157 563 306 70 23 chr15 75103699 75104000 -28390974 + MuLV-int LTR ERV1 2629 2943 -4663 1 1157 1092 109 0 0 chr15 75104035 75104182 -28390792 + B1_Mus1 SINE Alu 2 148 0 1 1157 198 0 0 0 chr15 75104182 75104204 -28390770 + (A)n Simple_repeat Simple_repeat 1 22 0 1 144 1996 312 45 51 chr15 75104249 75105887 -28389087 + MuRRS4-int LTR ERV1 2744 5628 -1973 1 1158 481 362 7 4 chr15 75106416 75106696 -28388278 + RLTR6-int LTR ERV1 7447 7727 -51 1 1158 2536 118 90 77 chr15 75106780 75107303 -28387671 + RLTR47_MM LTR ERV1 1 530 -2 1 1158 412 245 19 19 chr15 75107787 75107891 -28387083 + ORR1E LTR MaLR 1 104 -255 1 1158 271 248 168 22 chr15 75108007 75108113 -28386861 + ORR1E LTR MaLR 256 379 0 1 1158 1200 167 46 113 chr15 75110522 75110867 -28384107 - RLTRETN_Mm LTR ERVK 0 322 1 1 1158 491 100 23 70 chr15 75110867 75110953 -28384021 - ETnERV2-int LTR ERVK -1 7405 7324 1 1158 248 219 141 0 chr15 75110953 75111017 -28383957 - RLTR13B1 LTR ERVK -371 531 459 1 1158 415 204 343 16 chr15 75111034 75111231 -28383743 - RLTR13B1 LTR ERVK -487 415 155 1 1158 6270 135 21 29 chr15 75111233 75111253 -28383721 - MMETn-int LTR ERVK -203 7203 7188 1 1158 4345 23 0 0 chr15 75111253 75111735 -28383239 + LTRIS_Mm LTR ERV1 1 482 0 1 1158 6364 139 21 30 chr15 75111735 75112705 -28382269 - MMETn-int LTR ERVK -219 7187 6222 1 1158 294 238 60 0 chr15 75112753 75112837 -28382137 - MMETn-int LTR ERVK -1191 6215 6127 1 1158 7765 119 26 39 chr15 75112806 75114546 -28380428 - MMETn-int LTR ERVK -1703 3141 1730 1 1158 406 138 0 0 chr15 75114537 75114595 -28380379 - MMETn-int LTR ERVK -5162 2244 2187 1 1158 3164 40 3 0 chr15 75114595 75114970 -28380004 - L1Md_F2 LINE L1 -428 6154 5779 1 1158 3579 48 5 0 chr15 75114970 75115412 -28379562 + L1Md_F2 LINE L1 6139 6582 0 1 1158 7620 118 15 82 chr15 75115412 75116775 -28378199 - MMETn-int LTR ERVK -3564 1280 10 1 1158 1142 182 26 112 chr15 75116782 75117122 -28377852 - RLTRETN_Mm LTR ERVK 0 322 12 1 1158 579 146 0 0 chr15 75117854 75117984 -28376990 + (TG)n Simple_repeat Simple_repeat 1 130 0 1 1158 2047 162 27 3 chr15 75118335 75118700 -28376274 + ORR1D1 LTR MaLR 1 374 0 1 1158 2347 213 44 9 chr15 75118746 75119287 -28375687 - RLTR20B2 LTR ERVK 0 560 1 1 1158 231 267 0 0 chr15 75119406 75119466 -28375508 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 1158 1057 182 30 88 chr15 75119551 75119892 -28375082 + RLTRETN_Mm LTR ERVK 1 409 0 1 1158 794 194 14 0 chr15 75120289 75120433 -28374541 - B1_Mur4 SINE Alu 0 150 5 1 1158 441 0 0 0 chr15 75120733 75120782 -28374192 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1158 374 319 8 17 chr15 75120782 75120900 -28374074 - B4 SINE B4 -23 269 153 1 1158 442 192 0 0 chr15 75120897 75120970 -28374004 - B3 SINE B2 -129 87 15 1 1158 480 168 0 0 chr15 75121500 75121601 -28373373 + (TG)n Simple_repeat Simple_repeat 2 102 0 1 1158 429 314 71 5 chr15 75121698 75121739 -28373235 - RLTR18B LTR ERVK -102 410 367 1 1158 332 43 0 21 chr15 75121739 75121786 -28373188 + (TTAA)n Simple_repeat Simple_repeat 1 46 0 1 1158 429 314 71 5 chr15 75121786 75121955 -28373019 - RLTR18B LTR ERVK -146 366 187 1 1158 228 339 21 109 chr15 75122030 75122222 -28372752 - RLTR18 LTR ERVK -334 282 108 1 1158 411 21 0 0 chr15 75122621 75122669 -28372305 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1158 2572 198 72 28 chr15 75122815 75123383 -28371591 - RMER1B Other Other -9 1057 465 1 1158 437 299 28 7 chr15 75124706 75124851 -28370123 + B1F SINE Alu 1 148 -1 1 1158 375 362 64 26 chr15 75124876 75125140 -28369834 + B4A SINE B4 2 275 -17 1 1158 391 315 8 38 chr15 75125195 75125327 -28369647 + B4 SINE B4 4 131 -161 1 1158 324 269 15 92 chr15 75125371 75125502 -28369472 + B4A SINE B4 109 229 -63 1 1158 496 289 0 0 chr15 75125504 75125632 -28369342 + B3 SINE B2 1 128 -88 1 1158 405 0 0 0 chr15 75125706 75125751 -28369223 + (CATA)n Simple_repeat Simple_repeat 3 47 0 1 1158 39442 34 0 7 chr15 75128181 75134237 -28360737 - L1Md_T LINE L1 0 6582 631 1 1158 434 176 24 0 chr15 75134268 75134353 -28360621 - B1_Mur3 SINE Alu 0 149 63 1 1158 197 79 26 0 chr15 75134854 75134877 -28360097 + (CAAAAA)n Simple_repeat Simple_repeat 4 26 0 1 1158 1023 142 0 0 chr15 75134877 75135025 -28359949 + B1_Mus1 SINE Alu 1 148 0 1 1158 197 79 26 0 chr15 75135025 75135039 -28359935 + (CAAAAA)n Simple_repeat Simple_repeat 3 16 0 1 1158 235 235 115 19 chr15 75135248 75135352 -28359622 - RMER15 LTR ERVL -57 518 405 1 1158 275 49 0 24 chr15 75136369 75136411 -28358563 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 1 1158 1202 207 42 92 chr15 75137135 75137514 -28357460 + MTC LTR MaLR 51 405 -14 1 1158 1070 236 40 112 chr15 75137562 75137816 -28357158 + RMER10B LTR ERVL 1 223 -175 1 1158 872 36 0 9 chr15 75137816 75137929 -28357045 + (TCTCCC)n Simple_repeat Simple_repeat 4 115 0 1 1158 1070 236 40 112 chr15 75137929 75138103 -28356871 + RMER10B LTR ERVL 224 397 -1 1 1158 571 321 88 12 chr15 75138167 75138498 -28356476 + ORR1E LTR MaLR 1 356 -3 1 1158 1323 198 142 19 chr15 75138498 75138685 -28356289 - RMER17C LTR ERVK 0 410 190 1 1158 401 0 20 0 chr15 75138685 75138734 -28356240 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 1158 1323 198 142 19 chr15 75138734 75138909 -28356065 - RMER17C LTR ERVK -221 189 4 1 1158 437 237 32 0 chr15 75138921 75139014 -28355960 + Lx9 LINE L1 6955 7050 -594 1 1158 1026 158 105 0 chr15 75139192 75139439 -28355535 - RLTR47_MM LTR ERV1 -6 526 254 1 1158 613 211 24 55 chr15 75139444 75139609 -28355365 - ORR1C1 LTR MaLR -58 320 161 1 1158 437 196 10 49 chr15 75139651 75139753 -28355221 + ORR1C1 LTR MaLR 1 98 -280 1 1158 1224 138 81 4 chr15 75139751 75139999 -28354975 - RLTR47_MM LTR ERV1 -265 267 1 1 1158 1507 277 22 35 chr15 75140092 75140548 -28354426 - RMER1B Other Other -154 912 463 1 1158 515 248 20 27 chr15 75142140 75142289 -28352685 + B1F SINE Alu 2 149 0 1 1158 310 335 83 45 chr15 75142305 75142571 -28352403 + B4A SINE B4 2 277 -15 1 1158 522 309 17 87 chr15 75142638 75142879 -28352095 + B4 SINE B4 5 228 -64 1 1158 363 238 198 0 chr15 75142883 75142984 -28351990 + B3 SINE B2 3 123 -93 1 1158 272 319 21 52 chr15 75142961 75143057 -28351917 + B4 SINE B4 186 278 -14 1 1158 324 0 0 0 chr15 75143095 75143131 -28351843 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1158 585 40 0 0 chr15 75143131 75143206 -28351768 + (GA)n Simple_repeat Simple_repeat 2 77 0 1 1158 4373 126 60 26 chr15 75143409 75144189 -28350785 - RMER17D2 LTR ERVK -2 807 1 1 1158 310 295 44 9 chr15 75146000 75146012 -28348962 - B1_Mur3 SINE Alu -1 148 137 1 1158 225 0 0 0 chr15 75146012 75146037 -28348937 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 2 1158 310 295 44 9 chr15 75146037 75146137 -28348837 - B1_Mur3 SINE Alu -13 136 32 1 1158 245 0 86 0 chr15 75147022 75147057 -28347917 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 2 1158 336 263 92 8 chr15 75147059 75147178 -28347796 - ID_B1 SINE B4 -10 214 86 2 1158 323 308 85 70 chr15 75147273 75147402 -28347572 + RSINE1 SINE B4 35 165 0 2 1158 376 330 60 22 chr15 75147417 75147684 -28347290 - L1M3 LINE L1 -1604 4536 4260 2 1158 241 227 213 0 chr15 75147754 75147829 -28347145 + PB1D10 SINE Alu 1 91 -26 2 1158 731 198 252 0 chr15 75148132 75148334 -28346640 + ORR1A1 LTR MaLR 1 253 -93 2 1158 2648 146 14 39 chr15 75148344 75148829 -28346145 - MT2C_Mm LTR ERVL 0 475 3 2 1158 303 75 0 0 chr15 75148831 75148871 -28346103 - MERVL-int LTR ERVL 0 5485 5446 2 1158 273 172 0 45 chr15 75148878 75148945 -28346029 - ORR1A3-int LTR MaLR -1333 630 567 2 1158 343 97 81 0 chr15 75148945 75149007 -28345967 - MERVL-int LTR ERVL -132 5629 5563 2 1158 17373 145 14 4 chr15 75149069 75149961 -28345013 - MERVL-int LTR ERVL -134 5351 4450 2 1158 2916 81 5 10 chr15 75149961 75150359 -28344615 + MTA_Mm LTR MaLR 1 396 0 2 1158 17373 145 14 4 chr15 75150359 75152188 -28342786 - MERVL-int LTR ERVL -1036 4449 2604 2 1158 3613 151 38 38 chr15 75152190 75153081 -28341893 - RLTR13C1 LTR ERVK -7 895 33 2 1158 756 100 41 16 chr15 75153082 75153204 -28341770 - RMER10B LTR ERVL -273 125 1 2 1158 785 253 104 18 chr15 75153204 75153542 -28341432 - RMER5 LTR ERV1 -101 433 67 2 1158 479 112 150 0 chr15 75153637 75153717 -28341257 - MERVL-int LTR ERVL -3057 2704 2613 2 1158 273 278 105 39 chr15 75153724 75153894 -28341080 + ORR1D2 LTR MaLR 170 362 -8 2 1158 1642 174 32 47 chr15 75153971 75154376 -28340598 - RMER17C LTR ERVK -11 399 1 2 1158 447 245 0 0 chr15 75154386 75154484 -28340490 + Lx9 LINE L1 6953 7050 -594 2 1158 2368 141 87 0 chr15 75154668 75155150 -28339824 - RLTR47_MM LTR ERV1 -8 524 1 2 1158 1554 229 54 39 chr15 75155257 75155666 -28339308 - RMER1B Other Other -189 877 463 2 1158 645 240 7 20 chr15 75157267 75157416 -28337558 + B1F SINE Alu 3 149 0 2 1158 253 370 72 26 chr15 75157432 75157696 -28337278 + B4A SINE B4 2 277 -15 2 1158 513 243 71 118 chr15 75157756 75157994 -28336980 + B4A SINE B4 2 228 -64 2 1158 515 275 8 8 chr15 75157997 75158129 -28336845 + B3 SINE B2 1 132 -84 2 1158 480 121 0 0 chr15 75158253 75158344 -28336630 + (GA)n Simple_repeat Simple_repeat 2 92 0 2 1158 1100 109 0 0 chr15 75159564 75159711 -28335263 - B1_Mus1 SINE Alu 0 148 2 2 1158 595 209 23 0 chr15 75159728 75159857 -28335117 - B3 SINE B2 -84 132 1 2 1158 387 339 89 68 chr15 75159857 75160077 -28334897 - B4 SINE B4 -62 230 6 2 1158 510 310 64 17 chr15 75160140 75160373 -28334601 - B4A SINE B4 -17 275 32 2 1158 294 310 11 11 chr15 75160370 75160458 -28334516 - B1F SINE Alu -61 88 1 2 1158 1357 39 37 48 chr15 75161659 75161848 -28333126 + B2_Mm2 SINE B2 3 189 -6 2 1158 1496 191 13 0 chr15 75161868 75162167 -28332807 - ORR1D1 LTR MaLR -70 304 2 2 1158 243 177 0 0 chr15 75162546 75162608 -28332366 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 1158 35815 5 0 1 chr15 75163334 75170100 -28324874 - L1Md_A LINE L1 0 6582 1 2 1158 461 184 221 13 chr15 75170522 75170676 -28324298 + RLTR33 LTR ERVK 1 186 -492 2 1158 1202 208 72 22 chr15 75170676 75170996 -28323978 - RMER16 LTR ERVK 0 533 198 2 1158 643 240 0 14 chr15 75171027 75171175 -28323799 + RLTR33 LTR ERVK 178 323 -355 2 1158 1824 260 27 12 chr15 75171683 75172207 -28322767 + MuRRS4-int LTR ERV1 3556 4025 -1038 2 1158 344 266 0 12 chr15 75173251 75173331 -28321643 - B4A SINE B4 -61 231 153 2 1158 214 150 0 24 chr15 75173328 75173369 -28321605 - B2_Mm2 SINE B2 -108 87 48 2 1158 329 266 53 23 chr15 75173394 75173525 -28321449 - L1MC2 LINE L1 -210 6134 6000 2 1158 950 98 0 0 chr15 75173688 75173820 -28321154 - L1_Mus1 LINE L1 -1 6566 6435 2 1158 735 44 0 0 chr15 75173822 75173913 -28321061 + (CA)n Simple_repeat Simple_repeat 1 91 0 2 1158 621 95 32 0 chr15 75173927 75174022 -28320952 - ORR1A3 LTR MaLR -1 325 228 2 1158 2225 152 44 8 chr15 75174022 75174408 -28320566 + MTB_Mm LTR MaLR 1 400 0 2 1158 6401 131 13 73 chr15 75174408 75175576 -28319398 + MTB_Mm-int LTR MaLR 1 1098 0 2 1158 2549 109 8 10 chr15 75175576 75175976 -28318998 + MTB_Mm LTR MaLR 1 399 -8 2 1158 912 106 185 0 chr15 75175978 75176129 -28318845 + B2_Mm1t SINE B2 1 179 -14 2 1158 291 141 404 0 chr15 75176197 75176296 -28318678 + B2_Mm2 SINE B2 51 189 -6 2 1158 2668 65 18 0 chr15 75176502 75176842 -28318132 + ORR1A1 LTR MaLR 1 346 0 2 1158 270 0 0 0 chr15 75176934 75176964 -28318010 + (TC)n Simple_repeat Simple_repeat 2 31 0 2 1158 297 0 0 0 chr15 75176964 75176996 -28317978 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1158 350 313 66 6 chr15 75177162 75177329 -28317645 - RLTR18B LTR ERVK -143 369 193 2 1158 251 335 29 81 chr15 75177413 75177585 -28317389 - RLTR18 LTR ERVK -345 271 109 2 1158 2593 220 34 32 chr15 75177844 75178441 -28316533 - RMER1B Other Other -9 1057 460 2 1158 566 256 15 8 chr15 75179777 75179911 -28315063 + B1F SINE Alu 6 140 -9 2 1158 388 330 98 53 chr15 75179958 75180204 -28314770 + B4A SINE B4 21 277 -15 2 1158 292 305 29 58 chr15 75180265 75180404 -28314570 + B4 SINE B4 4 138 -154 2 1158 319 277 15 92 chr15 75180441 75180572 -28314402 + B4A SINE B4 109 229 -63 2 1158 505 262 8 0 chr15 75180574 75180696 -28314278 + B3 SINE B2 1 123 -93 2 1158 261 0 0 0 chr15 75180811 75180840 -28314134 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1158 1543 175 27 71 chr15 75181819 75182187 -28312787 - RMER17A2 LTR ERVK -554 352 1 2 1158 205 70 45 23 chr15 75182850 75182894 -28312080 + (TTTTTG)n Simple_repeat Simple_repeat 5 49 0 2 1158 419 167 36 0 chr15 75182917 75183001 -28311973 - B1_Mur3 SINE Alu 0 149 63 2 1158 1070 229 93 35 chr15 75184967 75185342 -28309632 + RMER17C LTR ERVK 8 404 -6 2 1158 280 232 45 110 chr15 75186005 75186160 -28308814 + RLTR14 LTR ERV1 224 368 -14 2 1158 341 252 29 29 chr15 75186214 75186316 -28308658 - RMER5 LTR ERV1 0 534 433 2 1158 648 245 30 12 chr15 75186320 75186485 -28308489 - RMER10B LTR ERVL 0 398 231 2 1158 315 0 0 0 chr15 75186500 75186535 -28308439 + (GA)n Simple_repeat Simple_repeat 2 36 0 2 1158 1434 188 40 36 chr15 75187368 75187672 -28307302 + MTC LTR MaLR 62 366 -55 2 1158 939 186 3 113 chr15 75187771 75188007 -28306967 + RMER10A LTR ERVL 1 216 -226 2 1158 753 73 0 0 chr15 75188007 75188116 -28306858 + (TC)n Simple_repeat Simple_repeat 2 110 0 2 1158 939 186 3 113 chr15 75188116 75188163 -28306811 + RMER10A LTR ERVL 217 253 -189 2 1158 2611 95 35 50 chr15 75188153 75188609 -28306365 + RLTR44C LTR ERVK 28 476 -26 2 1158 14587 132 30 76 chr15 75188622 75191568 -28303406 + RLTR44-int LTR ERVK 1 2812 0 2 1158 3210 82 23 127 chr15 75191568 75192128 -28302846 + RLTR44C LTR ERVK 1 502 0 2 1158 517 246 36 7 chr15 75192128 75192267 -28302707 + RMER10A LTR ERVL 256 398 0 2 1158 683 293 82 38 chr15 75192331 75192672 -28302302 + ORR1E LTR MaLR 1 356 -3 2 1158 1694 166 39 72 chr15 75192674 75193090 -28301884 - RMER17C LTR ERVK -8 402 1 2 1158 230 280 13 0 chr15 75193099 75193174 -28301800 + Lx9 LINE L1 6952 7027 -617 2 1158 5941 100 8 0 chr15 75193175 75193958 -28301016 - ETnERV2-int LTR ERVK -1756 5650 4862 2 1158 2425 109 47 11 chr15 75193944 75194466 -28300508 - ETnERV2-int LTR ERVK -3371 4035 3442 2 1158 3714 142 13 44 chr15 75194710 75195550 -28299424 - ETnERV2-int LTR ERVK -4271 3135 1946 2 1158 3134 152 77 17 chr15 75195581 75196215 -28298759 - ETnERV2-int LTR ERVK -5327 2079 1408 2 1158 32167 65 2 2 chr15 75196215 75200402 -28294572 + L1Md_F2 LINE L1 1398 5585 -298 2 1158 7968 58 9 0 chr15 75200403 75201388 -28293586 + L1Md_F2 LINE L1 5587 6580 -2 2 1158 1487 208 62 107 chr15 75201391 75202033 -28292941 - ETnERV2-int LTR ERVK -4281 563 2 2 1158 2202 127 83 18 chr15 75202034 75202418 -28292556 - RLTR9E LTR ERVK 0 409 1 2 1158 658 221 20 7 chr15 75203512 75203658 -28291316 + B1F SINE Alu 1 148 -1 2 1158 400 374 72 26 chr15 75203679 75203943 -28291031 + B4A SINE B4 2 277 -15 2 1158 581 304 8 81 chr15 75204004 75204249 -28290725 + B4 SINE B4 4 230 -62 2 1158 490 297 0 0 chr15 75204249 75204377 -28290597 + B3 SINE B2 1 128 -88 2 1158 528 16 0 0 chr15 75204494 75204555 -28290419 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 1158 5058 36 2 2 chr15 75205084 75205670 -28289304 + LTRIS_Mus LTR ERV1 2 587 0 2 1158 4503 80 84 9 chr15 75205907 75206658 -28288316 + RLTR13C2 LTR ERVK 1 1033 0 2 1158 405 0 0 0 chr15 75208307 75208352 -28286622 + (TTTG)n Simple_repeat Simple_repeat 1 45 0 2 1158 343 207 12 12 chr15 75208352 75208425 -28286549 - B1_Mur3 SINE Alu -13 136 63 2 1158 28 0 0 0 chr15 75209122 75209150 -28285824 + AT_rich Low_complexity Low_complexity 1 28 0 2 1158 336 288 102 0 chr15 75209379 75209497 -28285477 - ID_B1 SINE B4 -4 220 91 2 1158 362 298 86 9 chr15 75209600 75209705 -28285269 + RSINE1 SINE B4 47 159 -6 2 1158 289 328 76 13 chr15 75209750 75209862 -28285112 - L1M4 LINE L1 -1611 4535 4411 2 1158 1083 114 0 0 chr15 75209862 75210028 -28284946 + (TTC)n Simple_repeat Simple_repeat 2 167 0 2 1158 1391 63 40 0 chr15 75210028 75210202 -28284772 - B2_Mm2 SINE B2 -14 181 1 2 1158 289 328 76 13 chr15 75210202 75210326 -28284648 - L1M4 LINE L1 -1736 4410 4284 2 1158 301 325 111 19 chr15 75210522 75210729 -28284245 - MLT1B LTR MaLR -132 258 33 2 1158 1110 181 35 0 chr15 75210791 75211015 -28283959 + ORR1A2 LTR MaLR 1 232 -95 2 1158 2504 138 21 40 chr15 75211015 75211490 -28283484 - MT2C_Mm LTR ERVL 0 475 10 2 1158 267 75 0 91 chr15 75211492 75211536 -28283438 - MERVL-int LTR ERVL 0 5485 5446 2 1158 249 188 0 45 chr15 75211543 75211610 -28283364 - ORR1A3-int LTR MaLR -1333 630 567 2 1158 343 97 81 0 chr15 75211610 75211672 -28283302 - MERVL-int LTR ERVL -132 5629 5563 2 1158 22168 136 9 1 chr15 75211733 75215059 -28279915 - MERVL-int LTR ERVL -134 5351 1999 2 1158 747 182 8 0 chr15 75215072 75215204 -28279770 - B1_Mur4 SINE Alu -7 143 11 2 1158 1372 178 41 93 chr15 75216024 75216353 -28278621 + MTC LTR MaLR 32 358 -63 2 1158 974 224 18 72 chr15 75216455 75216734 -28278240 + RMER10B LTR ERVL 1 264 -134 2 1158 211 200 22 0 chr15 75216735 75216780 -28278194 + CT-rich Low_complexity Low_complexity 3 48 0 2 1158 455 269 24 48 chr15 75216808 75217015 -28277959 + RMER10B LTR ERVL 197 398 0 2 1158 720 306 70 58 chr15 75217078 75217422 -28277552 + ORR1E LTR MaLR 1 348 -11 2 1158 1663 197 48 20 chr15 75217427 75217826 -28277148 - RMER17C LTR ERVK 0 410 1 2 1158 542 175 21 0 chr15 75217835 75217932 -28277042 + Lx9 LINE L1 6952 7050 -594 3 1158 1002 277 57 25 chr15 75217985 75218351 -28276623 + Lx9 LINE L1 7203 7580 -64 3 1158 539 200 33 0 chr15 75218352 75218472 -28276502 + RMER17B LTR ERVK 176 299 -659 3 1158 6486 64 17 1 chr15 75218472 75219301 -28275673 + L1Md_F2 LINE L1 4745 5586 -297 3 1158 7722 63 8 13 chr15 75219302 75220302 -28274672 + L1Md_F2 LINE L1 5588 6582 0 3 1158 1220 187 37 60 chr15 75220328 75220680 -28274294 + RMER17C LTR ERVK 67 410 0 3 1158 270 0 0 0 chr15 75220822 75220852 -28274122 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1158 393 265 20 30 chr15 75220940 75221041 -28273933 + B3 SINE B2 87 186 -30 3 1158 245 245 0 0 chr15 75221525 75221578 -28273396 + PB1D9 SINE Alu 2 54 -66 3 1158 3042 116 91 8 chr15 75221579 75222076 -28272898 - RMER16-int LTR ERVK -4782 624 87 3 1158 246 216 74 83 chr15 75222421 75222542 -28272432 - RLTR8 LTR ERVK -3 362 243 3 1158 644 143 53 9 chr15 75222759 75222872 -28272102 + RMER1B Other Other 734 851 -215 3 1158 308 311 27 114 chr15 75223104 75223352 -28271622 + L1VL1 LINE L1 45 387 -6035 3 1158 503 250 43 7 chr15 75223403 75223544 -28271430 + L1Md_F LINE L1 664 809 -5807 3 1158 7039 126 2 82 chr15 75223546 75225242 -28269732 + L1Md_F LINE L1 725 2264 -3619 3 1158 1263 296 30 39 chr15 75225242 75225784 -28269190 - RNERVK23-int LTR ERVK -950 7267 6731 3 1158 6308 291 28 38 chr15 75225852 75225968 -28269006 - RNERVK23-int LTR ERVK -4770 3447 3350 3 1158 4374 60 35 12 chr15 75225968 75226540 -28268434 - L1Md_F2 LINE L1 0 6582 5998 3 1158 6308 291 28 38 chr15 75226540 75228065 -28266909 - RNERVK23-int LTR ERVK -4868 3349 1819 3 1158 4085 53 0 0 chr15 75228065 75228553 -28266421 - L1_Mus1 LINE L1 0 6567 6080 3 1158 6308 291 28 38 chr15 75228553 75229134 -28265840 - RNERVK23-int LTR ERVK -6399 1818 1245 3 1158 225 0 0 0 chr15 75229315 75229340 -28265634 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 3 1158 1143 64 0 14 chr15 75229341 75229483 -28265491 - B1_Mm SINE Alu -7 140 1 3 1158 352 343 19 19 chr15 75229527 75229741 -28265233 - RNERVK23-int LTR ERVK -7157 1060 847 3 1158 792 274 5 23 chr15 75230119 75230336 -28264638 - RNERVK23-int LTR ERVK -7728 489 277 3 1158 1057 109 17 22 chr15 75230337 75230515 -28264459 - L1Md_F2 LINE L1 0 6582 6406 3 1158 1806 43 0 0 chr15 75230515 75230726 -28264248 + L1Md_F2 LINE L1 6101 6311 -271 3 1158 4617 114 16 61 chr15 75230966 75231813 -28263161 - RMER17D2 LTR ERVK 0 809 1 3 1158 410 251 2 72 chr15 75231878 75232055 -28262919 - RLTR43A LTR ERVK 0 364 248 3 1158 780 158 0 41 chr15 75232306 75232451 -28262523 + MERVL-int LTR ERVL 1530 1668 -3817 3 144 20612 133 15 4 chr15 75232439 75235546 -28259428 + MERVL-int LTR ERVL 2212 5353 -132 3 1159 243 222 0 45 chr15 75235670 75235736 -28259238 + ORR1A3-int LTR MaLR 569 631 -1332 3 1159 335 45 0 0 chr15 75235738 75235782 -28259192 + MERVL-int LTR ERVL 5442 5485 0 3 1159 2621 148 16 43 chr15 75235782 75236270 -28258704 + MT2C_Mm LTR ERVL 1 475 0 3 1159 1279 172 4 0 chr15 75236270 75236502 -28258472 - ORR1A4 LTR MaLR -96 233 1 3 1159 281 329 71 0 chr15 75236676 75236816 -28258158 + MLT1B LTR MaLR 103 252 -138 3 1159 363 287 96 24 chr15 75237022 75237272 -28257702 + L1M4 LINE L1 4283 4550 -1596 3 1159 490 257 51 34 chr15 75237292 75237409 -28257565 - RSINE1 SINE B4 0 165 47 3 1159 587 51 0 12 chr15 75237425 75237505 -28257469 + (GGAA)n Simple_repeat Simple_repeat 4 82 0 3 1159 336 296 87 0 chr15 75237566 75237681 -28257293 + ID_B1 SINE B4 91 215 -9 3 1159 306 73 0 0 chr15 75237895 75237936 -28257038 + (CAA)n Simple_repeat Simple_repeat 2 42 0 3 1159 239 225 24 24 chr15 75238507 75238584 -28256390 + PB1D10 SINE Alu 4 80 -37 3 1159 256 362 9 0 chr15 75238584 75238700 -28256274 + B4A SINE B4 2 118 -174 3 1159 336 288 147 26 chr15 75238728 75238960 -28256014 - L1MB5 LINE L1 -125 6049 5790 3 1159 765 272 125 9 chr15 75239278 75239605 -28255369 + RMER5 LTR ERV1 69 433 -101 3 1159 1913 122 54 17 chr15 75239544 75239919 -28255055 - MTB LTR MaLR -8 411 5 3 1159 531 0 0 0 chr15 75239919 75239978 -28254996 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 1159 290 289 20 10 chr15 75240015 75240113 -28254861 + RMER5 LTR ERV1 433 531 -3 3 1159 2038 165 102 20 chr15 75240112 75240602 -28254372 - RLTR47_MM LTR ERV1 -1 531 2 3 1159 488 303 6 6 chr15 75240694 75240870 -28254104 - RLTR6-int LTR ERV1 -57 7721 7546 3 1159 455 0 18 0 chr15 75240888 75240943 -28254031 + (TC)n Simple_repeat Simple_repeat 2 57 0 3 1159 1850 312 59 59 chr15 75241717 75243309 -28251665 - MuRRS4-int LTR ERV1 -2000 5606 2744 3 1159 764 317 30 46 chr15 75243327 75243764 -28251210 - RLTR6-int LTR ERV1 -4676 3102 2673 3 1159 3696 116 11 33 chr15 75243933 75244567 -28250407 + RLTR5_Mm LTR ERV1 9 628 0 3 1159 746 329 85 42 chr15 75244574 75245754 -28249220 - RLTR6-int LTR ERV1 -5129 2427 1040 3 1159 374 289 28 57 chr15 75246114 75246388 -28248586 - RLTR6-int LTR ERV1 -6906 872 527 3 1159 1170 138 100 12 chr15 75246973 75247222 -28247752 - RLTR47_MM LTR ERV1 -9 523 253 3 1159 30328 116 10 15 chr15 75247256 75253240 -28241734 - L1_Mus2 LINE L1 0 6566 592 3 1159 21 0 0 0 chr15 75253242 75253263 -28241711 + AT_rich Low_complexity Low_complexity 1 21 0 3 1159 1500 117 68 0 chr15 75253886 75254135 -28240839 - RLTR47_MM LTR ERV1 -266 266 1 3 1159 625 201 7 20 chr15 75254849 75254998 -28239976 - RLTR33 LTR ERVK -351 327 181 3 1159 1187 193 77 29 chr15 75254998 75255340 -28239634 + RMER16 LTR ERVK 1 533 0 3 1159 715 174 96 13 chr15 75255349 75255506 -28239468 - RLTR33 LTR ERVK -501 177 8 3 1159 397 307 115 66 chr15 75255671 75255942 -28239032 - RLTR18 LTR ERVK -330 286 2 3 1159 432 0 0 0 chr15 75256286 75256334 -28238640 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1159 2608 200 67 26 chr15 75256471 75256572 -28238402 - RMER1B Other Other -19 1047 936 3 1159 261 0 0 0 chr15 75256572 75256601 -28238373 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1159 2608 200 67 26 chr15 75256601 75257079 -28237895 - RMER1B Other Other -131 935 445 3 1159 284 53 0 0 chr15 75257136 75257174 -28237800 + tRNA-Met_ tRNA tRNA 1 38 -38 3 1159 457 299 21 7 chr15 75258726 75258871 -28236103 + B1F SINE Alu 3 149 0 3 1159 341 349 79 38 chr15 75258895 75259160 -28235814 + B4A SINE B4 2 277 -15 3 1159 627 286 21 56 chr15 75259221 75259454 -28235520 + B4 SINE B4 4 228 -64 3 1159 452 245 9 9 chr15 75259466 75259577 -28235397 + B3 SINE B2 13 123 -93 3 1159 725 245 130 64 chr15 75260903 75261248 -28233726 - RLTR9A LTR ERVK 0 368 1 3 1159 225 143 0 39 chr15 75262441 75262492 -28232482 + T-rich Low_complexity Low_complexity 2 50 0 3 1159 471 183 12 0 chr15 75262495 75262577 -28232397 - B1_Mur3 SINE Alu -9 140 58 3 1159 195 114 0 0 chr15 75262591 75262626 -28232348 + (CTG)n Simple_repeat Simple_repeat 3 37 0 3 1159 4506 122 38 45 chr15 75263947 75264762 -28230212 - RMER17D2 LTR ERVK 0 809 1 3 1159 259 329 78 32 chr15 75264794 75264948 -28230026 - RMER15 LTR ERVL -57 518 358 3 1159 37076 33 3 8 chr15 75265433 75270610 -28224364 + L1Md_F2 LINE L1 441 5586 -297 3 1159 8217 46 4 3 chr15 75270610 75271605 -28223369 + L1Md_F2 LINE L1 5587 6582 0 3 1159 1585 172 136 24 chr15 75272274 75272461 -28222513 + RMER17C LTR ERVK 1 188 -222 3 1159 801 47 26 33 chr15 75272461 75272614 -28222360 + (TTCTC)n Simple_repeat Simple_repeat 5 156 0 3 1159 1585 172 136 24 chr15 75272614 75272795 -28222179 + RMER17C LTR ERVK 189 409 -1 3 1159 372 258 142 29 chr15 75273500 75273704 -28221270 + L1MB5 LINE L1 5790 6016 -158 3 1159 249 360 9 0 chr15 75273758 75273872 -28221102 - B4A SINE B4 -176 116 2 3 1159 285 205 24 24 chr15 75273872 75273952 -28221022 - PB1D10 SINE Alu -37 80 1 3 1159 236 289 98 40 chr15 75274504 75274677 -28220297 - L1M4 LINE L1 -1148 4998 4816 3 1159 221 265 0 42 chr15 75274685 75274756 -28220218 + CT-rich Low_complexity Low_complexity 3 70 0 3 1159 344 294 70 52 chr15 75274756 75274871 -28220103 + RSINE1 SINE B4 47 163 -2 3 1159 33 43 0 0 chr15 75274871 75274918 -28220056 + AT_rich Low_complexity Low_complexity 1 47 0 3 1159 422 285 79 9 chr15 75274958 75275174 -28219800 - L1M4 LINE L1 -1633 4513 4283 3 1159 217 203 230 0 chr15 75275262 75275336 -28219638 + PB1D10 SINE Alu 1 91 -26 3 1159 2033 138 19 0 chr15 75275637 75275956 -28219018 + ORR1A3 LTR MaLR 1 325 -1 3 1159 206 32 32 0 chr15 75275973 75276004 -28218970 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1159 468 278 26 26 chr15 75276100 75276252 -28218722 - ID_B1 SINE B4 -43 249 94 3 1159 476 171 80 0 chr15 75276736 75276824 -28218150 + B3 SINE B2 15 109 -107 3 1159 262 322 17 25 chr15 75276806 75276924 -28218050 + B4A SINE B4 153 269 -23 3 1159 192 40 0 0 chr15 75276924 75276949 -28218025 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1159 881 179 14 0 chr15 75277043 75277188 -28217786 + B1_Mur4 SINE Alu 4 150 0 3 1159 492 18 0 0 chr15 75277670 75277727 -28217247 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1159 2885 189 29 14 chr15 75277846 75278398 -28216576 + RLTR20B2 LTR ERVK 1 560 0 3 1159 359 102 34 0 chr15 75278445 75278504 -28216470 - ORR1D1 LTR MaLR 0 374 314 3 1159 2827 91 7 15 chr15 75278507 75278910 -28216064 + MTB LTR MaLR 1 400 0 3 1159 1525 212 10 7 chr15 75278910 75279209 -28215765 - ORR1D1 LTR MaLR -74 300 1 3 1159 960 62 0 0 chr15 75279534 75279662 -28215312 + (TC)n Simple_repeat Simple_repeat 1 128 0 3 1159 504 32 0 0 chr15 75279662 75279723 -28215251 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 1159 268 244 154 11 chr15 75282784 75282875 -28212099 - ORR1E LTR MaLR -20 359 256 3 1159 368 232 88 18 chr15 75282972 75283086 -28211888 - ORR1E LTR MaLR -235 124 3 3 1159 229 290 0 16 chr15 75284483 75284546 -28210428 + FLAM_A SINE Alu 13 74 -221 3 1159 1283 237 58 66 chr15 75285085 75285447 -28209527 + ORR1D2 LTR MaLR 10 368 -2 3 1159 430 197 0 17 chr15 75285502 75285621 -28209353 + (TA)n Simple_repeat Simple_repeat 2 118 0 3 1159 311 352 8 46 chr15 75285852 75285983 -28208991 + L1MEg LINE L1 1073 1198 -5002 3 1159 240 208 25 89 chr15 75286096 75286175 -28208799 + L1MEg LINE L1 1162 1235 -4965 3 1159 302 274 83 28 chr15 75286482 75286591 -28208383 + L1MC4 LINE L1 7740 7854 -188 3 1159 379 275 73 0 chr15 75286626 75286735 -28208239 - PB1D10 SINE Alu 0 117 1 3 1159 489 214 0 0 chr15 75288684 75288782 -28206192 - PB1D10 SINE Alu -15 102 5 3 1159 346 302 117 36 chr15 75289889 75290085 -28204889 + RMER5 LTR ERV1 1 212 -322 3 1159 207 0 0 0 chr15 75290214 75290237 -28204737 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 3 1159 799 136 75 8 chr15 75290277 75290410 -28204564 - B1_Mur4 SINE Alu -8 142 1 3 1159 424 256 51 36 chr15 75290417 75290555 -28204419 + RMER5 LTR ERV1 350 489 -45 3 1159 1913 195 35 35 chr15 75291781 75292175 -28202799 + MTD LTR MaLR 14 407 -12 3 1159 281 305 119 0 chr15 75293316 75293467 -28201507 - L1MB3 LINE L1 -228 5955 5787 3 1159 188 42 59 59 chr15 75293507 75293558 -28201416 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 3 1159 266 315 146 43 chr15 75293785 75294107 -28200867 - L1MB3 LINE L1 -380 5791 5437 3 1159 401 347 73 46 chr15 75294115 75294344 -28200630 - MTEa LTR MaLR -3 376 139 4 1159 2227 196 19 183 chr15 75294344 75295075 -28199899 - RMER19C LTR ERVK 0 611 1 4 1159 480 222 3 2 chr15 75295075 75295179 -28199795 - MTEa LTR MaLR -241 138 2 4 1159 292 225 62 12 chr15 75295558 75295639 -28199335 + RMER15 LTR ERVL 420 504 -71 4 1159 752 31 0 10 chr15 75295723 75295819 -28199155 + (TC)n Simple_repeat Simple_repeat 2 96 0 4 1159 1297 95 6 0 chr15 75295819 75295998 -28198976 - B2_Mm1a SINE B2 -12 181 2 4 1159 814 164 39 93 chr15 75296020 75296045 -28198929 - B2_Mm2 SINE B2 -23 172 156 4 1159 189 74 0 0 chr15 75296045 75296072 -28198902 + (TATG)n Simple_repeat Simple_repeat 2 28 0 4 1159 814 164 39 93 chr15 75296072 75296228 -28198746 - B2_Mm2 SINE B2 -40 155 1 4 1159 453 253 163 0 chr15 75296314 75296480 -28198494 - ID_B1 SINE B4 -30 194 2 4 1159 273 145 0 0 chr15 75296612 75296674 -28198300 + (TC)n Simple_repeat Simple_repeat 2 63 0 4 1159 598 234 16 16 chr15 75296685 75296811 -28198163 - B1_Mus2 SINE Alu -21 126 1 4 1159 347 313 201 0 chr15 75296811 75297025 -28197949 - Tigger7 DNA MER2_type -1981 510 254 4 1159 666 222 55 7 chr15 75297391 75297536 -28197438 - RSINE1 SINE B4 -10 155 4 4 1159 2191 67 28 0 chr15 75297942 75298226 -28196748 - L1_Mus1 LINE L1 -1 6566 6275 4 1159 471 289 117 28 chr15 75298690 75298939 -28196035 + L1MB5 LINE L1 5790 6060 -114 4 1159 302 351 9 0 chr15 75298957 75299071 -28195903 - B4A SINE B4 -176 116 2 4 1159 289 217 24 24 chr15 75299071 75299151 -28195823 - PB1D10 SINE Alu -37 80 1 4 1159 434 282 60 52 chr15 75299946 75300062 -28194912 + RSINE1 SINE B4 47 163 -2 4 1159 29 78 0 0 chr15 75300062 75300126 -28194848 + AT_rich Low_complexity Low_complexity 1 64 0 4 1159 456 298 75 9 chr15 75300139 75300366 -28194608 - L1M4 LINE L1 -1622 4524 4283 4 1159 232 202 183 97 chr15 75300454 75300547 -28194427 + PB1D10 SINE Alu 1 101 -16 4 1159 379 273 133 93 chr15 75300572 75300798 -28194176 - MLT1B LTR MaLR -138 252 18 4 1159 1905 150 22 3 chr15 75300835 75301156 -28193818 + ORR1A2 LTR MaLR 1 327 0 4 1159 405 0 0 0 chr15 75301165 75301210 -28193764 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1159 333 0 0 0 chr15 75301230 75301267 -28193707 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 4 1159 555 266 23 23 chr15 75301361 75301492 -28193482 - ID_B1 SINE B4 -2 222 92 4 1159 310 290 90 42 chr15 75301812 75301956 -28193018 + L1MC2 LINE L1 5995 6145 -199 4 1159 507 171 80 0 chr15 75301965 75302053 -28192921 + B3 SINE B2 15 109 -107 4 1159 404 284 8 17 chr15 75302035 75302153 -28192821 + B4A SINE B4 153 269 -23 4 1159 492 18 0 0 chr15 75302153 75302210 -28192764 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1159 850 179 14 0 chr15 75302305 75302450 -28192524 + B1_Mur4 SINE Alu 4 150 0 4 1159 2727 192 46 9 chr15 75303065 75303605 -28191369 + RLTR20B2 LTR ERVK 1 560 0 4 1159 352 103 35 0 chr15 75303653 75303711 -28191263 - ORR1D1 LTR MaLR -1 373 314 4 1159 2814 93 8 12 chr15 75303714 75304116 -28190858 + MTB LTR MaLR 1 400 0 4 1159 1606 205 10 3 chr15 75304116 75304414 -28190560 - ORR1D1 LTR MaLR -74 300 1 4 1159 399 41 0 0 chr15 75304764 75304813 -28190161 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1159 227 261 169 11 chr15 75307868 75307957 -28187017 - ORR1D2 LTR MaLR -20 359 257 4 1159 231 279 115 0 chr15 75308063 75308167 -28186807 - ORR1D2 LTR MaLR -244 126 11 4 1159 338 179 8 37 chr15 75309596 75309681 -28185293 + B1_Mur4 SINE Alu 14 94 -53 4 1159 1142 222 54 101 chr15 75310187 75310573 -28184401 + ORR1D2 LTR MaLR 1 368 -2 4 1159 355 262 0 14 chr15 75310628 75310775 -28184199 + (TA)n Simple_repeat Simple_repeat 2 146 0 4 1159 438 114 0 0 chr15 75310801 75310871 -28184103 + (CA)n Simple_repeat Simple_repeat 2 71 0 4 1159 244 191 0 0 chr15 75311706 75311753 -28183221 + L1MC4a LINE L1 7735 7781 -101 4 1159 416 239 73 0 chr15 75311823 75311932 -28183042 - PB1D10 SINE Alu 0 117 1 4 1159 354 276 0 0 chr15 75313933 75314031 -28180943 - PB1D10 SINE Alu -15 102 5 4 1159 30609 99 40 10 chr15 75314579 75319623 -28175351 + L1Md_F2 LINE L1 388 5585 -298 4 1159 8043 47 6 7 chr15 75319624 75320569 -28174405 + L1Md_F2 LINE L1 5587 6533 -49 4 1159 2800 64 3 3 chr15 75320569 75320914 -28174060 + IAPLTR4 LTR ERVK 1 345 0 4 1159 8043 47 6 7 chr15 75320914 75320952 -28174022 + L1Md_F2 LINE L1 6534 6569 -13 4 1159 5443 97 3 5 chr15 75320993 75321750 -28173224 + L1_Mus2 LINE L1 5801 6555 -11 4 1159 657 38 0 0 chr15 75321751 75321831 -28173143 + (GGA)n Simple_repeat Simple_repeat 3 82 0 4 1159 939 259 78 153 chr15 75322443 75322826 -28172148 + RMER5 LTR ERV1 1 347 -187 4 1159 964 122 22 0 chr15 75322826 75322965 -28172009 - B1_Mur4 SINE Alu -8 142 1 4 1159 939 259 78 153 chr15 75322965 75323110 -28171864 + RMER5 LTR ERV1 348 489 -45 4 1159 292 296 35 0 chr15 75324354 75324469 -28170505 - L1MB3 LINE L1 0 6183 6065 4 1159 187 79 26 26 chr15 75324658 75324697 -28170277 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 1159 1919 138 28 0 chr15 75324977 75325295 -28169679 + ORR1A2 LTR MaLR 1 327 0 4 1159 477 0 0 0 chr15 75325300 75325353 -28169621 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 1159 441 0 0 0 chr15 75325353 75325401 -28169573 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1159 571 260 21 29 chr15 75325491 75325647 -28169327 - ID_B1 SINE B4 -43 249 92 4 1159 497 182 80 0 chr15 75326130 75326218 -28168756 + B3 SINE B2 15 109 -107 4 1159 411 284 8 17 chr15 75326200 75326318 -28168656 + B4A SINE B4 153 269 -23 4 1159 444 19 0 0 chr15 75326318 75326371 -28168603 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1159 846 186 14 0 chr15 75326465 75326610 -28168364 + B1_Mur4 SINE Alu 4 150 0 4 1159 423 0 0 0 chr15 75327071 75327118 -28167856 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1159 2787 211 16 11 chr15 75327226 75327783 -28167191 + RLTR20B2 LTR ERVK 1 560 0 4 1159 1778 176 78 3 chr15 75327830 75327886 -28167088 - ORR1D1 LTR MaLR 0 374 302 4 1159 2758 98 10 12 chr15 75327886 75328287 -28166687 + MTB LTR MaLR 1 400 0 4 1159 1778 176 78 3 chr15 75328287 75328578 -28166396 - ORR1D1 LTR MaLR -73 301 2 4 1159 528 65 0 0 chr15 75328898 75328975 -28165999 + (TC)n Simple_repeat Simple_repeat 1 77 0 4 1159 582 15 0 0 chr15 75328975 75329041 -28165933 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 1159 367 277 21 0 chr15 75332342 75332436 -28162538 - ORR1E LTR MaLR -261 98 3 4 1159 276 205 11 32 chr15 75333861 75333954 -28161020 + B1F2 SINE Alu 21 111 -16 4 1159 1006 242 52 91 chr15 75334453 75334816 -28160158 + ORR1D2 LTR MaLR 10 358 -12 4 1159 1464 59 38 0 chr15 75334825 75335011 -28159963 + B2_Mm2 SINE B2 2 194 -1 4 1159 405 70 0 0 chr15 75335078 75335135 -28159839 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 1159 328 181 0 24 chr15 75335144 75335229 -28159745 + (TA)n Simple_repeat Simple_repeat 2 84 0 4 1159 242 67 0 0 chr15 75335230 75335260 -28159714 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1159 245 291 0 25 chr15 75335458 75335539 -28159435 + L1MEf LINE L1 1076 1154 -5046 4 1159 305 250 79 53 chr15 75336159 75336273 -28158701 - PB1D10 SINE Alu 0 117 1 4 1159 455 245 0 0 chr15 75338236 75338334 -28156640 - PB1D10 SINE Alu -15 102 5 4 1159 26046 116 6 8 chr15 75338628 75342643 -28152331 + L1_Mus1 LINE L1 1302 5305 -578 4 1159 7511 81 4 1 chr15 75342662 75343640 -28151334 + L1_Mus1 LINE L1 5587 6567 0 4 1159 9042 123 25 8 chr15 75343650 75345680 -28149294 + L1_Mus2 LINE L1 4445 6906 -94 4 1159 799 186 14 0 chr15 75345680 75345820 -28149154 - B1_Mur4 SINE Alu -8 142 1 4 1159 415 241 51 36 chr15 75345827 75345965 -28149009 + RMER5 LTR ERV1 350 489 -45 4 1159 1790 104 7 4 chr15 75346503 75346773 -28148201 + MTB LTR MaLR 130 400 0 4 1159 1583 174 10 3 chr15 75346775 75347069 -28147905 - ORR1D1 LTR MaLR -78 296 1 4 1159 754 30 10 10 chr15 75347391 75347493 -28147481 + (TC)n Simple_repeat Simple_repeat 1 102 0 4 1159 231 157 0 0 chr15 75347504 75347555 -28147419 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1159 294 286 33 0 chr15 75350833 75350924 -28144050 - ORR1E LTR MaLR -255 104 11 4 1159 231 191 0 21 chr15 75352346 75352394 -28142580 + B1F2 SINE Alu 21 67 -82 4 1159 988 251 57 87 chr15 75352919 75353289 -28141685 + ORR1D2 LTR MaLR 10 368 -2 4 1159 398 165 0 12 chr15 75353344 75353424 -28141550 + (TG)n Simple_repeat Simple_repeat 2 80 0 4 1159 273 271 12 12 chr15 75353433 75353519 -28141455 + (TA)n Simple_repeat Simple_repeat 2 87 0 4 1159 213 65 0 0 chr15 75353525 75353556 -28141418 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1159 35711 42 5 4 chr15 75354062 75359262 -28135712 + L1Md_T LINE L1 288 5589 -297 4 1159 8670 30 0 0 chr15 75359262 75360287 -28134687 + L1Md_T LINE L1 5590 6585 0 4 1159 316 250 86 9 chr15 75360773 75360878 -28134096 - PB1D10 SINE Alu 0 117 5 4 1159 317 287 46 0 chr15 75360797 75360884 -28134090 - ID_B1 SINE B4 -54 170 80 4 1159 443 235 0 0 chr15 75362841 75362939 -28132035 - PB1D10 SINE Alu -15 102 5 4 1159 22 0 0 0 chr15 75362939 75362961 -28132013 + AT_rich Low_complexity Low_complexity 1 22 0 4 1159 3152 190 43 34 chr15 75363482 75364341 -28130633 + L1Md_F LINE L1 290 1183 -5354 4 1159 1113 171 52 48 chr15 75364342 75364593 -28130381 + MTD LTR MaLR 156 407 -12 4 1159 341 241 241 0 chr15 75365727 75365893 -28129081 - L1MB3 LINE L1 -191 5992 5787 4 144 249 291 179 52 chr15 75366203 75366471 -28128503 - L1MB3 LINE L1 -418 5753 5452 4 1160 275 317 38 19 chr15 75366499 75366605 -28128369 - MTEa LTR MaLR -8 371 264 4 1160 1515 234 14 82 chr15 75366721 75367461 -28127513 - RMER19C LTR ERVK 0 902 1 4 1160 426 221 0 0 chr15 75367476 75367565 -28127409 - MTEa LTR MaLR -289 90 2 4 1160 583 227 16 25 chr15 75367885 75368007 -28126967 + ETnERV2-int LTR ERVK 7058 7178 -228 4 1160 369 311 25 15 chr15 75368239 75368435 -28126539 + RLTR45-int LTR ERVK 169 366 -6878 4 1160 2181 164 154 38 chr15 75368590 75369096 -28125878 + RMER16-int LTR ERVK 255 819 -4587 5 1160 422 165 268 0 chr15 75369101 75369198 -28125776 + RMER16-int LTR ERVK 938 1060 -5077 5 1160 1321 232 55 21 chr15 75369211 75369501 -28125473 + ETnERV2-int LTR ERVK 2454 2753 -4653 5 1160 486 0 0 0 chr15 75369517 75369571 -28125403 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 5 1160 447 248 0 16 chr15 75369571 75369694 -28125280 + ETnERV2-int LTR ERVK 2942 3062 -4344 5 1160 5368 249 102 100 chr15 75369666 75370371 -28124603 + ETnERV2-int LTR ERVK 4097 4812 -2594 5 1160 456 19 0 0 chr15 75370371 75370424 -28124550 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1160 5368 249 102 100 chr15 75370424 75372812 -28122162 + ETnERV2-int LTR ERVK 4813 7195 -211 5 1160 245 272 64 21 chr15 75373256 75373350 -28121624 + RMER15 LTR ERVL 420 517 -58 5 1160 231 36 0 0 chr15 75373439 75373467 -28121507 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 1160 939 138 6 0 chr15 75373467 75373626 -28121348 - B2_Mm1a SINE B2 -32 161 2 5 1160 750 196 15 61 chr15 75373632 75373673 -28121301 - B2_Mm2 SINE B2 -8 187 154 5 1160 378 61 0 0 chr15 75373673 75373722 -28121252 + (TATG)n Simple_repeat Simple_repeat 4 52 0 5 1160 750 196 15 61 chr15 75373722 75373876 -28121098 - B2_Mm2 SINE B2 -42 153 1 5 1160 410 269 162 0 chr15 75373962 75374129 -28120845 - ID_B1 SINE B4 -30 194 1 5 1160 606 116 0 0 chr15 75374268 75374351 -28120623 + (TC)n Simple_repeat Simple_repeat 2 84 0 5 1160 594 219 49 0 chr15 75374351 75374474 -28120500 - B1_Mus2 SINE Alu -18 129 1 5 1160 606 116 0 0 chr15 75374474 75374485 -28120489 + (TC)n Simple_repeat Simple_repeat 1 11 0 5 1160 351 312 43 6 chr15 75374539 75374700 -28120274 - Tigger7 DNA MER2_type -2081 410 244 5 1160 711 201 55 7 chr15 75375102 75375247 -28119727 - RSINE1 SINE B4 -10 155 4 5 1160 383 276 114 27 chr15 75375654 75375803 -28119171 - RSINE1 SINE B4 -1 164 3 5 1160 522 250 75 0 chr15 75375818 75375938 -28119036 - B1F1 SINE Alu -19 130 2 5 1160 25 0 0 0 chr15 75376113 75376138 -28118836 + AT_rich Low_complexity Low_complexity 1 25 0 5 1160 552 266 12 48 chr15 75377284 75377450 -28117524 + RSINE1 SINE B4 6 165 0 5 1160 946 209 28 19 chr15 75377482 75377696 -28117278 - B3 SINE B2 0 216 1 5 1160 307 304 11 0 chr15 75377696 75377788 -28117186 - 4.5SRNA scRNA scRNA -1 93 1 5 1160 922 240 10 20 chr15 75377904 75378108 -28116866 - B3 SINE B2 -13 203 2 5 1160 238 146 20 59 chr15 75378153 75378204 -28116770 - ID_B1 SINE B4 -2 222 174 5 1160 211 222 37 0 chr15 75378180 75378234 -28116740 - B1_Mus1 SINE Alu -58 90 35 5 1160 1457 63 0 31 chr15 75378425 75378620 -28116354 + B2_Mm1t SINE B2 1 189 -4 5 1160 212 167 0 0 chr15 75380418 75380460 -28114514 + A-rich Low_complexity Low_complexity 1 42 0 5 1160 786 238 161 7 chr15 75380479 75380683 -28114291 - ORR1D2 LTR MaLR -18 352 132 5 1160 590 0 14 0 chr15 75380683 75380753 -28114221 + (CA)n Simple_repeat Simple_repeat 2 72 0 5 1160 786 238 161 7 chr15 75380753 75380853 -28114121 - ORR1D2 LTR MaLR -239 131 3 5 1160 405 177 50 5 chr15 75380854 75381052 -28113922 + (TAGA)n Simple_repeat Simple_repeat 1 206 0 5 1160 713 257 68 24 chr15 75381225 75381432 -28113542 + ID_B1 SINE B4 3 218 -6 5 1160 460 273 108 63 chr15 75381614 75381994 -28112980 - L1M5 LINE L1 -356 5806 5401 5 1160 1324 112 0 5 chr15 75382446 75382653 -28112321 + ORR1A2 LTR MaLR 1 206 -121 5 1160 4241 61 26 19 chr15 75382728 75383297 -28111677 + L1Md_F2 LINE L1 5997 6569 -13 5 1160 27 0 0 0 chr15 75383315 75383342 -28111632 + AT_rich Low_complexity Low_complexity 1 27 0 5 1160 1042 240 73 35 chr15 75385355 75385670 -28109304 + ORR1D2 LTR MaLR 1 327 -43 5 1160 743 231 128 23 chr15 75385783 75386091 -28108883 - ORR1E LTR MaLR -1 378 22 5 1160 318 106 0 0 chr15 75386363 75386410 -28108564 + (CAA)n Simple_repeat Simple_repeat 1 47 0 5 1160 502 266 0 0 chr15 75386835 75386944 -28108030 + B1_Mur2 SINE Alu 31 139 -10 5 1160 34 55 0 0 chr15 75386944 75386999 -28107975 + AT_rich Low_complexity Low_complexity 1 55 0 5 1160 684 205 6 44 chr15 75388118 75388276 -28106698 - RMER5 LTR ERV1 -1 533 382 5 1160 1780 119 62 13 chr15 75388279 75388586 -28106388 + ORR1A4 LTR MaLR 1 322 -7 5 1160 678 304 20 40 chr15 75388642 75388940 -28106034 + B4A SINE B4 1 292 0 5 1160 693 274 48 89 chr15 75388985 75389322 -28105652 - RMER5 LTR ERV1 -154 380 58 5 1160 271 244 10 113 chr15 75389954 75389976 -28104998 - BC1_Mm scRNA scRNA -48 104 87 5 1160 973 217 35 0 chr15 75389976 75390179 -28104795 - B3 SINE B2 -6 210 1 5 1160 279 235 14 29 chr15 75390179 75390249 -28104725 - ID_B1 SINE B4 -133 91 23 5 1160 450 0 0 0 chr15 75392526 75392576 -28102398 + (TGGA)n Simple_repeat Simple_repeat 1 50 0 5 1160 466 296 28 14 chr15 75393309 75393453 -28101521 + RSINE1 SINE B4 8 153 -12 5 1160 684 232 96 44 chr15 75398834 75399105 -28095869 + L1MB7 LINE L1 5900 6184 0 5 1160 287 281 7 103 chr15 75399127 75399334 -28095640 + L1MEg LINE L1 961 1138 -4981 5 1160 366 311 226 16 chr15 75399345 75399655 -28095319 + L1MEg LINE L1 1208 1582 -4643 5 1160 622 292 10 10 chr15 75399655 75399852 -28095122 + L1M2 LINE L1 5281 5477 -814 5 1160 233 278 10 30 chr15 75399846 75399946 -28095028 + L1M2 LINE L1 5420 5517 -666 5 1160 360 298 106 4 chr15 75400012 75400248 -28094726 + L1MA7 LINE L1 6020 6279 -12 5 1160 472 255 0 0 chr15 75400266 75400372 -28094602 - PB1D10 SINE Alu 0 117 12 5 1160 318 329 88 72 chr15 75400445 75400707 -28094267 + ORR1E LTR MaLR 85 350 -9 5 1160 616 258 0 0 chr15 75400770 75400902 -28094072 - ID_B1 SINE B4 -3 221 90 5 1160 249 291 112 19 chr15 75400908 75401069 -28093905 + L1MEg LINE L1 1562 1737 -4412 5 1160 467 213 38 0 chr15 75401505 75401632 -28093342 + MLT2D LTR ERVL 5 136 -379 5 1160 274 212 14 43 chr15 75401664 75401733 -28093241 - B1F SINE Alu -17 132 66 5 1160 279 0 0 0 chr15 75401755 75401786 -28093188 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1160 1499 260 46 46 chr15 75401837 75402316 -28092658 - RMER20A LTR ERVK -37 479 1 5 1160 1661 223 128 41 chr15 75402336 75402424 -28092550 - RMER15 LTR ERVL 0 575 487 5 1160 2781 79 9 76 chr15 75402424 75402531 -28092443 + MTB_Mm LTR MaLR 1 111 -296 5 1160 1115 69 0 7 chr15 75402531 75402677 -28092297 + B1_Mus1 SINE Alu 3 147 -1 5 1160 2781 79 9 76 chr15 75402677 75403005 -28091969 + MTB_Mm LTR MaLR 112 407 0 5 1160 1661 223 128 41 chr15 75403005 75403361 -28091613 - RMER15 LTR ERVL -89 486 82 5 1160 1532 204 117 139 chr15 75403361 75403912 -28091062 - RMER4B LTR ERVK 0 585 53 5 1160 195 42 0 0 chr15 75403912 75403936 -28091038 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1160 1532 204 117 139 chr15 75403936 75403982 -28090992 - RMER4B LTR ERVK -533 52 1 5 1160 1661 223 128 41 chr15 75403982 75404046 -28090928 - RMER15 LTR ERVL -494 81 22 5 1160 246 211 53 0 chr15 75404070 75404127 -28090847 - RMER15 LTR ERVL -515 60 1 5 1160 618 217 61 0 chr15 75404140 75404255 -28090719 - RSINE1 SINE B4 -41 124 3 5 1160 624 249 183 26 chr15 75404258 75404526 -28090448 + MLT2D LTR ERVL 102 411 -3 5 1160 417 279 145 17 chr15 75405469 75405684 -28089290 + MLT1F2 LTR MaLR 311 620 -7 5 1160 603 0 0 0 chr15 75406215 75406282 -28088692 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 1160 348 340 57 32 chr15 75406333 75406368 -28088606 + B4 SINE B4 53 172 -120 5 1160 612 223 0 2 chr15 75406368 75406496 -28088478 + B1_Mur1 SINE Alu 1 125 -22 5 1160 348 340 57 32 chr15 75406496 75406515 -28088459 + B4 SINE B4 173 246 -46 5 1160 365 176 0 27 chr15 75406526 75406672 -28088302 + GA-rich Low_complexity Low_complexity 2 143 0 5 1160 527 207 58 0 chr15 75406676 75406797 -28088177 - B4 SINE B4 -68 224 97 5 1160 650 266 7 0 chr15 75406789 75406928 -28088046 - B3 SINE B2 -67 149 10 5 1160 476 210 17 0 chr15 75407309 75407411 -28087563 + B1F SINE Alu 19 126 -23 5 1160 305 198 24 47 chr15 75407379 75407464 -28087510 + B1_Mur4 SINE Alu 67 149 -1 5 1160 284 304 171 0 chr15 75407638 75407796 -28087178 - B4 SINE B4 -82 210 26 5 1160 293 312 96 25 chr15 75407896 75408136 -28086838 - L1ME2z LINE L1 -148 6296 6040 5 1160 772 118 8 45 chr15 75408136 75408511 -28086463 + (CA)n Simple_repeat Simple_repeat 1 360 0 5 1160 1578 195 65 9 chr15 75408622 75408958 -28086016 - MTD LTR MaLR -14 405 51 5 1160 1416 54 0 0 chr15 75409236 75409747 -28085227 + (TG)n Simple_repeat Simple_repeat 1 511 0 5 1160 327 296 58 78 chr15 75409952 75410106 -28084868 + B4A SINE B4 2 152 -140 5 1160 459 0 0 0 chr15 75410892 75410943 -28084031 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1160 374 274 0 70 chr15 75410972 75411086 -28083888 - PB1D10 SINE Alu -11 106 1 5 1160 324 0 0 0 chr15 75411091 75411127 -28083847 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 5 1160 374 0 0 21 chr15 75411787 75411834 -28083140 + (TTA)n Simple_repeat Simple_repeat 2 47 0 5 1160 762 129 0 0 chr15 75411920 75412060 -28082914 + (CA)n Simple_repeat Simple_repeat 1 140 0 5 1160 1291 239 141 30 chr15 75413010 75413472 -28081502 + RMER20A LTR ERVK 1 513 -3 5 1160 449 110 14 0 chr15 75413778 75413851 -28081123 + (GGGA)n Simple_repeat Simple_repeat 4 77 0 5 1160 625 250 32 13 chr15 75413863 75414018 -28080956 - B3A SINE B2 -13 203 46 5 1160 186 43 0 0 chr15 75415793 75415816 -28079158 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1160 453 111 12 0 chr15 75416453 75416526 -28078448 - B1_Mur4 SINE Alu -55 95 14 5 1160 388 296 234 26 chr15 75416997 75417309 -28077665 + MLT1B LTR MaLR 12 388 -2 5 1160 324 0 0 0 chr15 75418629 75418665 -28076309 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1160 355 322 67 22 chr15 75418695 75418767 -28076207 + RMER15 LTR ERVL 275 349 -226 5 1160 1164 114 38 0 chr15 75418767 75418951 -28076023 + B2_Mm2 SINE B2 5 195 0 5 1160 355 322 67 22 chr15 75418951 75419056 -28075918 + RMER15 LTR ERVL 350 460 -115 5 1160 324 0 0 0 chr15 75419269 75419305 -28075669 + (T)n Simple_repeat Simple_repeat 1 36 0 5 1160 762 160 0 94 chr15 75419675 75419834 -28075140 + B1_Mur2 SINE Alu 6 149 0 5 1160 278 47 47 0 chr15 75419852 75419895 -28075079 + (GGGA)n Simple_repeat Simple_repeat 3 47 0 5 1160 2374 136 19 35 chr15 75420231 75420659 -28074315 + MTC LTR MaLR 1 421 0 5 1160 1958 122 3 86 chr15 75420664 75421023 -28073951 + ORR1A4 LTR MaLR 1 329 0 5 1160 3201 45 0 7 chr15 75421277 75421680 -28073294 - MTB LTR MaLR 0 400 1 5 1160 3136 28 28 5 chr15 75422209 75422600 -28072374 + MTB LTR MaLR 1 400 0 5 1160 248 251 67 66 chr15 75425897 75426077 -28068897 - MIRc SINE MIR -69 193 19 6 1160 360 291 228 22 chr15 75429703 75429935 -28065039 + MLT1J LTR MaLR 204 483 -29 6 1160 236 170 19 0 chr15 75430533 75430586 -28064388 + (CA)n Simple_repeat Simple_repeat 1 54 0 6 1160 342 0 0 0 chr15 75431164 75431202 -28063772 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1160 333 0 0 0 chr15 75431202 75431238 -28063736 + (GA)n Simple_repeat Simple_repeat 1 37 0 6 1160 3224 85 39 2 chr15 75431272 75431730 -28063244 - MT2C_Mm LTR ERVL 0 475 1 6 1160 1758 151 71 24 chr15 75431733 75432073 -28062901 - ORR1D1 LTR MaLR -2 372 17 6 1160 270 0 0 0 chr15 75432123 75432153 -28062821 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1160 584 176 0 0 chr15 75432314 75432416 -28062558 - B1_Mur2 SINE Alu -6 143 42 6 1160 254 0 0 159 chr15 75432419 75432545 -28062429 + (CTCTG)n Simple_repeat Simple_repeat 5 110 0 6 1160 273 0 0 0 chr15 75432547 75432578 -28062396 + MurSatRep1 Unknown Unknown 230 260 -1877 6 1160 24 0 0 0 chr15 75432681 75432705 -28062269 + AT_rich Low_complexity Low_complexity 1 24 0 6 1160 697 227 107 10 chr15 75432994 75433190 -28061784 - B3 SINE B2 0 216 2 6 1160 928 121 0 7 chr15 75433350 75433500 -28061474 - B2_Mm2 SINE B2 0 195 47 6 1160 198 0 0 0 chr15 75434242 75434264 -28060710 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1160 551 235 94 0 chr15 75434453 75434602 -28060372 - MLT1B LTR MaLR -184 206 44 6 1160 229 309 51 41 chr15 75435328 75435426 -28059548 - RMER15 LTR ERVL -44 531 433 6 1160 1246 238 119 11 chr15 75435630 75436008 -28058966 - MTD LTR MaLR 0 419 1 6 1160 354 346 51 0 chr15 75436023 75436179 -28058795 - Lx8 LINE L1 -357 7116 6953 6 1160 249 238 144 90 chr15 75436296 75436311 -28058663 + PB1D10 SINE Alu 1 13 -104 6 1160 1132 243 55 65 chr15 75436311 75436694 -28058280 - MTE2a LTR MaLR 0 379 1 6 1160 249 238 144 90 chr15 75436694 75436789 -28058185 + PB1D10 SINE Alu 14 117 0 6 1160 723 289 46 5 chr15 75436792 75437011 -28057963 + B4A SINE B4 2 229 -63 6 1160 746 170 0 64 chr15 75437011 75437168 -28057806 + B1_Mus2 SINE Alu 1 147 0 6 1160 21 0 0 0 chr15 75437168 75437189 -28057785 + AT_rich Low_complexity Low_complexity 1 21 0 6 1160 1061 212 0 24 chr15 75437208 75437420 -28057554 + B3 SINE B2 10 216 0 6 1160 306 0 0 0 chr15 75437476 75437510 -28057464 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1160 334 281 0 0 chr15 75437517 75437581 -28057393 + tRNA-Ala-GCG tRNA tRNA 1 64 -11 6 1160 1756 83 0 0 chr15 75437891 75438132 -28056842 + L1_Mus1 LINE L1 6327 6567 0 6 1160 5067 320 64 49 chr15 75438159 75438675 -28056299 - RMER15-int LTR ERVL -226 4773 4246 6 1160 2434 83 3 0 chr15 75438675 75439001 -28055973 + ORR1A2 LTR MaLR 1 327 0 6 1160 5067 320 64 49 chr15 75439001 75440915 -28054059 - RMER15-int LTR ERVL -754 4245 2307 6 1160 1318 78 0 6 chr15 75440935 75441116 -28053858 + B2_Mm2 SINE B2 2 181 -14 6 1160 725 271 71 20 chr15 75441127 75441323 -28053651 - B3 SINE B2 -2 214 9 6 1160 909 251 39 0 chr15 75441496 75441699 -28053275 - B3 SINE B2 -1 215 5 6 1160 534 307 181 19 chr15 75441842 75442108 -28052866 - RMER15 LTR ERVL 0 575 267 6 1160 291 250 73 0 chr15 75443011 75443079 -28051895 - RSINE1 SINE B4 -80 85 13 6 1160 810 233 90 79 chr15 75443342 75443608 -28051366 + B4A SINE B4 1 269 -23 6 1160 231 125 0 0 chr15 75443656 75443696 -28051278 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1160 1470 60 38 0 chr15 75443697 75443882 -28051092 - B2_Mm2 SINE B2 -3 192 1 6 1160 586 298 5 97 chr15 75443947 75444032 -28050942 + B4A SINE B4 2 69 -223 6 1160 227 319 8 131 chr15 75444032 75444162 -28050812 + PB1D7 SINE Alu 1 114 -6 6 1160 470 227 46 34 chr15 75445817 75445977 -28048997 + L1MD LINE L1 5491 5664 -2331 6 1160 267 237 102 8 chr15 75446402 75446492 -28048482 + PB1D7 SINE Alu 3 94 -53 6 1160 285 283 53 51 chr15 75448876 75449164 -28045810 + MMSAT4 Satellite Satellite 1 288 -5 6 1160 961 180 24 6 chr15 75450335 75450503 -28044471 + MTEa LTR MaLR 10 180 -199 6 1160 431 287 15 69 chr15 75450504 75450635 -28044339 + RSINE1 SINE B4 3 126 -39 6 1160 513 182 284 7 chr15 75450710 75450865 -28044109 + MTEa LTR MaLR 166 363 -16 6 1160 486 217 165 8 chr15 75451651 75451772 -28043202 - B1F SINE Alu 0 149 10 6 1160 624 221 20 41 chr15 75451813 75451959 -28043015 - B1F SINE Alu 0 149 7 6 1160 252 77 0 0 chr15 75452682 75452721 -28042253 + (GTTTG)n Simple_repeat Simple_repeat 1 39 0 6 1160 411 253 10 31 chr15 75452722 75452820 -28042154 - B1_Mur3 SINE Alu -52 97 2 6 1160 848 179 14 7 chr15 75453040 75453186 -28041788 + B1_Mur2 SINE Alu 2 148 -1 6 1160 928 245 24 5 chr15 75453260 75453465 -28041509 - B3 SINE B2 -7 209 1 6 1160 441 0 0 0 chr15 75453733 75453782 -28041192 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1160 280 239 75 0 chr15 75456079 75456146 -28038828 + MER20 DNA MER1_type 1 72 -147 6 1160 841 204 6 36 chr15 75456531 75456699 -28038275 + B3 SINE B2 27 189 -27 6 1160 181 314 93 42 chr15 75456797 75456990 -28037984 + L2b LINE L2 2941 3143 -232 6 1160 1796 181 48 21 chr15 75456998 75457397 -28037577 - RLTR14 LTR ERV1 -3 379 6 6 1160 491 176 48 19 chr15 75457397 75457501 -28037473 - RLTR14-int LTR ERV1 -73 5244 5138 6 1160 669 166 2 3 chr15 75458037 75458161 -28036813 + B1_Mus2 SINE Alu 16 137 -12 6 1160 1060 248 50 0 chr15 75458575 75458857 -28036117 + RLTR42-int LTR ERVK 1106 1401 -4121 6 1160 364 77 39 0 chr15 75459146 75459198 -28035776 + RLTR42-int LTR ERVK 1045 1098 -4424 6 1160 911 133 0 0 chr15 75459218 75459346 -28035628 + B1_Mus1 SINE Alu 21 148 0 6 1160 225 263 92 121 chr15 75459346 75459387 -28035587 - YREP_Mm Unknown Unknown -1511 297 134 6 1160 228 309 60 82 chr15 75459501 75459635 -28035339 - MER49 LTR ERV1 -316 607 477 6 1160 48 32 0 0 chr15 75459670 75459732 -28035242 + AT_rich Low_complexity Low_complexity 1 62 0 6 1160 862 197 73 29 chr15 75460214 75460460 -28034514 + RLTR42-int LTR ERVK 1871 2127 -3395 6 1160 323 240 0 0 chr15 75460446 75460521 -28034453 + RLTR42-int LTR ERVK 2330 2404 -3733 6 1160 320 244 12 12 chr15 75460580 75460663 -28034311 - RLTR14-int LTR ERV1 -1690 3627 3545 6 1160 3650 138 40 48 chr15 75460666 75461357 -28033617 + RMER6A LTR ERVK 4 689 -67 6 1160 348 138 0 0 chr15 75461357 75461415 -28033559 + RLTR14-int LTR ERV1 2421 2478 -2839 6 1160 1802 131 145 6 chr15 75461411 75461631 -28033343 - RLTR14-int LTR ERV1 -2878 2439 2197 6 1160 351 0 0 0 chr15 75461631 75461670 -28033304 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 6 1160 1802 131 145 6 chr15 75461670 75461794 -28033180 - RLTR14-int LTR ERV1 -3121 2196 2049 6 1160 1539 142 47 4 chr15 75461794 75462049 -28032925 + ORR1B1 LTR MaLR 121 386 -8 6 1160 1007 151 0 29 chr15 75462127 75462298 -28032676 - RLTR14-int LTR ERV1 -3277 2040 1875 6 1160 352 300 125 62 chr15 75462298 75462458 -28032516 - RLTR9E LTR ERVK -6 403 234 6 1160 548 112 33 11 chr15 75462725 75462815 -28032159 - RLTR14-int LTR ERV1 -3434 1883 1792 6 1160 2000 200 19 63 chr15 75462910 75463385 -28031589 - RLTR14-int LTR ERV1 -3579 1738 1285 6 1160 1171 149 200 27 chr15 75463460 75463732 -28031242 - RLTR14-int LTR ERV1 -4030 1287 969 6 1160 1768 144 149 13 chr15 75463736 75464052 -28030922 - ORR1B2 LTR MaLR -8 359 1 6 1160 1357 219 180 66 chr15 75464185 75464792 -28030182 - RLTR14-int LTR ERV1 -4447 870 195 6 1160 367 323 113 71 chr15 75464792 75465145 -28029829 + RLTR9A LTR ERVK 1 368 0 6 1160 188 0 74 0 chr15 75465639 75465666 -28029308 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1160 16132 169 62 71 chr15 75465801 75466336 -28028638 + RMER16-int LTR ERVK 240 785 -4621 6 1160 429 36 0 0 chr15 75466336 75466391 -28028583 + (TTGG)n Simple_repeat Simple_repeat 2 56 0 6 1160 1043 31 70 0 chr15 75466391 75466519 -28028455 - B1_Mm SINE Alu -8 139 3 6 1160 16132 169 62 71 chr15 75466519 75468809 -28026165 + RMER16-int LTR ERVK 786 3138 -2268 6 1160 1379 74 11 0 chr15 75468809 75468985 -28025989 + B2_Mm1t SINE B2 2 179 -14 6 1160 16132 169 62 71 chr15 75468985 75469032 -28025942 + RMER16-int LTR ERVK 3139 3185 -2221 6 1160 414 132 333 19 chr15 75469032 75469140 -28025834 + B2_Mm2 SINE B2 47 188 -7 6 1160 16132 169 62 71 chr15 75469140 75469921 -28025053 + RMER16-int LTR ERVK 3186 3970 -1436 6 1160 294 143 0 0 chr15 75470264 75470313 -28024661 + (A)n Simple_repeat Simple_repeat 1 49 0 6 1160 738 193 38 99 chr15 75470978 75471191 -28023783 - RLTR14-int LTR ERV1 -5117 200 1 6 1160 2379 137 16 5 chr15 75471191 75471565 -28023409 - RLTR14 LTR ERV1 0 382 5 6 1160 227 182 0 22 chr15 75473253 75473298 -28021676 - ID SINE ID -178 46 3 6 1160 3030 51 75 0 chr15 75474220 75474592 -28020382 - MTB LTR MaLR 0 400 1 6 1160 578 29 0 0 chr15 75474789 75474859 -28020115 - MTB LTR MaLR -26 374 305 6 1160 227 167 115 16 chr15 75474944 75475005 -28019969 - B1F1 SINE Alu -71 78 12 6 1160 1176 228 82 75 chr15 75478973 75479400 -28015574 + RLTR42-int LTR ERVK 1105 1534 -3988 6 1160 349 96 39 0 chr15 75479550 75479602 -28015372 + RLTR19-int LTR ERVK 1045 1098 -4424 6 1160 1058 129 202 0 chr15 75479701 75479879 -28015095 + B3 SINE B2 3 216 0 6 1160 31 0 0 0 chr15 75480189 75480220 -28014754 + AT_rich Low_complexity Low_complexity 1 31 0 6 1160 411 197 194 63 chr15 75480562 75480599 -28014375 + RLTR19-int LTR ERVK 1870 1921 -3601 6 1160 615 62 0 0 chr15 75480599 75480679 -28014295 + (GAAA)n Simple_repeat Simple_repeat 1 80 0 6 1160 411 197 194 63 chr15 75480679 75480863 -28014111 + RLTR19-int LTR ERVK 1922 2119 -3403 6 1160 415 95 14 8 chr15 75480884 75480988 -28013986 - B2_Mm2 SINE B2 -6 189 47 6 1160 212 167 23 23 chr15 75480951 75480994 -28013980 - ID4_ SINE ID -2 81 39 6 1160 1311 86 11 0 chr15 75481001 75481176 -28013798 - B2_Mm1t SINE B2 -14 179 3 6 1160 1319 279 53 44 chr15 75481176 75481704 -28013270 + RLTR19-int LTR ERVK 2353 2885 -3252 6 1160 443 255 60 120 chr15 75481779 75481994 -28012980 + RLTR19-int LTR ERVK 2877 3076 -3061 6 1160 363 44 0 0 chr15 75481994 75482039 -28012935 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1160 443 255 60 120 chr15 75482039 75482122 -28012852 + RLTR19-int LTR ERVK 3077 3156 -2981 6 1160 650 164 172 0 chr15 75482227 75482349 -28012625 - B1_Mus1 SINE Alu -4 144 2 6 1160 286 241 122 68 chr15 75482360 75482565 -28012409 + RLTR19-int LTR ERVK 3186 3401 -2736 6 1160 319 164 0 0 chr15 75482695 75482750 -28012224 - B2_Mm2 SINE B2 -94 101 47 6 1160 1311 85 11 0 chr15 75482782 75482958 -28012016 - B2_Mm1t SINE B2 -14 179 2 6 1160 676 220 87 100 chr15 75483009 75483374 -28011600 + RLTR19-int LTR ERVK 3657 3967 -2170 6 1160 431 276 40 29 chr15 75483579 75483754 -28011220 + RLTR19-int LTR ERVK 4231 4407 -1730 6 1160 894 126 27 20 chr15 75483942 75484088 -28010886 + B1_Mur3 SINE Alu 3 149 0 6 1160 456 194 36 36 chr15 75484598 75484648 -28010326 + RMER17C LTR ERVK 112 163 -247 6 1160 213 39 0 0 chr15 75484648 75484674 -28010300 + (CCCCCT)n Simple_repeat Simple_repeat 5 30 0 6 1160 456 194 36 36 chr15 75484674 75484789 -28010185 + RMER17C LTR ERVK 164 277 -133 6 1160 564 171 9 71 chr15 75485689 75485802 -28009172 - PB1D9 SINE Alu -1 119 14 6 1160 280 261 150 8 chr15 75485718 75485838 -28009136 - B4 SINE B4 -105 187 51 6 1160 2428 84 19 0 chr15 75485863 75486184 -28008790 - ORR1A2 LTR MaLR 0 327 1 6 1160 342 248 87 19 chr15 75486240 75486343 -28008631 + PB1 SINE Alu 11 120 -7 6 1160 278 286 182 10 chr15 75486443 75486542 -28008432 - PB1 SINE Alu -7 120 5 7 1160 1360 171 0 5 chr15 75488576 75488793 -28006181 + B3 SINE B2 1 216 0 7 1160 444 266 124 21 chr15 75489421 75489663 -28005311 + L1M4 LINE L1 3418 3684 -2462 7 1160 460 311 86 5 chr15 75490170 75490367 -28004607 + MER68 LTR ERVL 13 225 -338 7 1160 768 229 69 17 chr15 75490716 75490914 -28004060 + B3 SINE B2 6 214 -2 7 1160 452 187 13 0 chr15 75490969 75491044 -28003930 + PB1D9 SINE Alu 3 78 -42 7 1160 515 219 33 16 chr15 75492464 75492585 -28002389 - ID_B1 SINE B4 -1 223 101 7 1160 519 228 59 0 chr15 75492737 75492850 -28002124 + PB1D7 SINE Alu 2 119 -1 7 1160 426 360 78 5 chr15 75492922 75493140 -28001834 + L1M2 LINE L1 4790 5023 -1120 7 1160 465 232 88 14 chr15 75493373 75493486 -28001488 - B1_Mur1 SINE Alu 0 117 2 7 1160 278 288 25 0 chr15 75494639 75494719 -28000255 - ID4 SINE ID 0 83 2 7 1160 240 35 0 0 chr15 75495235 75495264 -27999710 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 7 1160 2067 165 39 17 chr15 75496289 75496647 -27998327 + ORR1B2 LTR MaLR 1 366 -1 7 1161 417 54 0 0 chr15 75497651 75497707 -27997267 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 1161 188 158 0 17 chr15 75498114 75498172 -27996802 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 1161 2404 46 39 0 chr15 75498537 75498844 -27996130 - ORR1A2 LTR MaLR -8 319 1 7 1161 408 222 274 67 chr15 75501673 75501837 -27993137 - B3A SINE B2 0 198 1 1 1161 263 330 39 85 chr15 75502485 75502745 -27992229 + L1M5 LINE L1 4884 5132 -1014 2 1161 851 163 212 6 chr15 75502800 75502944 -27992030 + B3 SINE B2 1 164 -52 3 1161 249 33 0 0 chr15 75502944 75502974 -27992000 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1161 851 163 212 6 chr15 75502974 75503008 -27991966 + B3 SINE B2 165 215 -1 3 1161 22 0 0 0 chr15 75503008 75503030 -27991944 + AT_rich Low_complexity Low_complexity 1 22 0 5 1161 296 270 27 91 chr15 75503087 75503197 -27991777 + PB1D10 SINE Alu 9 111 -6 6 1161 674 242 35 40 chr15 75503203 75503401 -27991573 + B3 SINE B2 2 198 -18 7 1161 717 249 120 106 chr15 75503401 75503512 -27991462 + RLTR40 LTR ERVK 2 107 -710 8 1161 953 189 121 11 chr15 75503512 75503694 -27991280 + B3 SINE B2 1 202 -14 9 1161 717 249 120 106 chr15 75503694 75503865 -27991109 + RLTR40 LTR ERVK 108 288 -529 8 1161 446 196 237 32 chr15 75503860 75504050 -27990924 + RLTR40 LTR ERVK 515 743 -74 8 1161 817 145 30 0 chr15 75504079 75504210 -27990764 + B1_Mur4 SINE Alu 1 135 -15 1 1161 795 133 0 0 chr15 75504217 75504345 -27990629 + (GGAA)n Simple_repeat Simple_repeat 1 128 0 1 1161 225 259 19 0 chr15 75504352 75504406 -27990568 + L1M5 LINE L1 5368 5422 -757 2 1161 245 133 21 62 chr15 75505098 75505146 -27989828 - RSINE1 SINE B4 -75 90 45 1 1161 386 215 38 0 chr15 75505214 75505293 -27989681 - ID4_ SINE ID 0 83 2 1 1161 399 240 62 62 chr15 75505530 75505659 -27989315 + RSINE1 SINE B4 22 150 -15 1 1161 611 178 0 0 chr15 75505712 75505819 -27989155 + B1_Mur2 SINE Alu 43 149 0 1 1161 774 212 7 0 chr15 75505866 75506012 -27988962 + B1_Mur1 SINE Alu 3 149 0 1 1161 351 0 0 0 chr15 75506207 75506246 -27988728 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1161 441 266 32 0 chr15 75507543 75507637 -27987337 - PB1D7 SINE Alu -23 97 1 1 1161 1151 42 7 14 chr15 75507648 75507793 -27987181 - B1_Mus1 SINE Alu 0 148 5 1 1161 186 188 0 0 chr15 75508308 75508340 -27986634 - MIRc SINE MIR -117 151 120 2 1161 808 204 49 16 chr15 75510579 75510763 -27984211 + B4 SINE B4 4 193 -99 2 1161 270 0 0 0 chr15 75510819 75510849 -27984125 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1161 433 288 121 7 chr15 75511718 75511858 -27983116 + RSINE1 SINE B4 2 157 -8 2 1161 255 31 0 0 chr15 75512527 75512559 -27982415 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1161 476 266 16 8 chr15 75513500 75513625 -27981349 - ID_B1 SINE B4 -18 206 81 2 1161 345 47 0 0 chr15 75514281 75514324 -27980650 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1161 934 192 5 42 chr15 75514919 75514955 -27980019 + B3 SINE B2 34 62 -154 2 1161 2471 176 27 12 chr15 75514955 75515368 -27979606 + MTC LTR MaLR 3 421 0 2 1161 934 192 5 42 chr15 75515368 75515521 -27979453 + B3 SINE B2 63 216 0 2 1161 381 86 0 0 chr15 75515550 75515608 -27979366 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1161 21 82 0 0 chr15 75515704 75515753 -27979221 + AT_rich Low_complexity Low_complexity 1 49 0 3 1161 1076 83 24 12 chr15 75515798 75515954 -27979020 + B2_Mm2 SINE B2 2 159 -36 3 1161 534 31 0 0 chr15 75515954 75516018 -27978956 + (TAAA)n Simple_repeat Simple_repeat 3 66 0 3 1161 1076 83 24 12 chr15 75516018 75516031 -27978943 + B2_Mm2 SINE B2 160 172 -23 3 1161 374 134 164 0 chr15 75516034 75516101 -27978873 + B3A SINE B2 2 79 -119 3 1161 579 308 197 32 chr15 75516107 75516630 -27978344 + L1MB5 LINE L1 4564 5172 -974 3 1161 1361 118 0 5 chr15 75516736 75516932 -27978042 + B2_Mm2 SINE B2 1 195 0 3 1161 217 244 167 24 chr15 75516970 75517054 -27977920 + PB1D10 SINE Alu 1 96 -21 3 1161 361 208 14 0 chr15 75517093 75517165 -27977809 + RSINE1 SINE B4 3 75 -90 3 1161 206 109 61 61 chr15 75517248 75517273 -27977701 + T-rich Low_complexity Low_complexity 26 50 0 3 1161 1159 75 7 0 chr15 75517273 75517420 -27977554 - B1_Mus1 SINE Alu 0 148 1 3 1161 206 109 61 61 chr15 75517420 75517443 -27977531 + T-rich Low_complexity Low_complexity 2 25 0 4 1161 7357 72 15 15 chr15 75517448 75518474 -27976500 - Lx LINE L1 -1 6653 5628 4 1161 233 312 140 0 chr15 75518477 75518570 -27976404 + L1MB5 LINE L1 5417 5522 -662 3 1161 1188 282 106 41 chr15 75518725 75518917 -27976057 + MT2A LTR ERVL 5 198 -335 4 1161 1449 241 82 12 chr15 75518917 75519257 -27975717 - ORR1D2 LTR MaLR -2 368 5 4 1161 1188 282 106 41 chr15 75519257 75519555 -27975419 + MT2A LTR ERVL 199 527 -6 4 1161 296 327 71 33 chr15 75519671 75519875 -27975099 + L1MB5 LINE L1 5785 5995 -179 3 1161 324 0 0 0 chr15 75520589 75520625 -27974349 + (TC)n Simple_repeat Simple_repeat 1 36 0 4 1161 441 0 0 0 chr15 75520852 75520901 -27974073 + (GA)n Simple_repeat Simple_repeat 1 49 0 4 1161 589 245 18 12 chr15 75521290 75521455 -27973519 + Lx4B LINE L1 6889 7054 -4 4 1161 237 358 0 0 chr15 75521727 75521794 -27973180 - RSINE1 SINE B4 -10 155 89 4 1161 949 121 117 34 chr15 75521874 75522053 -27972921 + B2_Mm2 SINE B2 2 195 0 4 1161 1548 82 0 5 chr15 75522055 75522251 -27972723 + B2_Mm2 SINE B2 1 195 0 4 1161 315 0 0 0 chr15 75525712 75525747 -27969227 + (TC)n Simple_repeat Simple_repeat 2 36 0 5 1161 189 171 0 0 chr15 75525747 75525782 -27969192 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1161 614 293 5 67 chr15 75525792 75525986 -27968988 - B3A SINE B2 -16 182 1 5 1161 459 0 0 0 chr15 75526617 75526668 -27968306 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1161 356 301 129 100 chr15 75527786 75528026 -27966948 - ORR1E LTR MaLR -36 323 77 5 1161 268 308 0 13 chr15 75528455 75528534 -27966440 + ID4_ SINE ID 1 78 -5 5 1161 317 342 36 27 chr15 75528937 75529048 -27965926 - RSINE1 SINE B4 -14 151 40 5 1161 405 202 0 135 chr15 75529127 75529253 -27965721 + PB1D9 SINE Alu 1 109 -11 5 1161 306 0 0 0 chr15 75529253 75529287 -27965687 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1161 977 144 0 40 chr15 75529456 75529608 -27965366 - B1_Mus2 SINE Alu -1 146 1 5 1161 237 132 0 0 chr15 75529611 75529649 -27965325 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 1161 730 160 32 0 chr15 75529663 75529788 -27965186 - B3 SINE B2 -86 130 2 6 1161 286 283 250 49 chr15 75529901 75530209 -27964765 - MLT1A LTR MaLR 0 374 5 6 1161 1445 86 16 0 chr15 75531085 75531271 -27963703 + B2_Mm2 SINE B2 5 193 -2 6 1161 207 0 0 0 chr15 75531312 75531335 -27963639 + (TTG)n Simple_repeat Simple_repeat 3 25 0 6 1161 1355 58 53 0 chr15 75531414 75531585 -27963389 - B2_Mm2 SINE B2 -14 181 2 6 1161 228 308 12 71 chr15 75531830 75531914 -27963060 - ID4_ SINE ID -4 79 1 6 1161 216 0 0 0 chr15 75532655 75532679 -27962295 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6 1161 572 271 109 6 chr15 75532693 75532849 -27962125 - ID_B1 SINE B4 -32 192 21 6 1161 650 319 0 30 chr15 75533170 75533367 -27961607 + B3A SINE B2 2 192 -6 6 1161 837 0 0 0 chr15 75533663 75533756 -27961218 + (GGGGA)n Simple_repeat Simple_repeat 3 95 0 7 1161 216 0 0 0 chr15 75535664 75535688 -27959286 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 1161 185 61 91 0 chr15 75535703 75535736 -27959238 + GA-rich Low_complexity Low_complexity 2 37 0 7 1161 210 71 0 0 chr15 75535836 75535864 -27959110 + (GGGA)n Simple_repeat Simple_repeat 2 29 0 7 1161 360 0 0 0 chr15 75537090 75537130 -27957844 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 1161 572 0 0 14 chr15 75537826 75537895 -27957079 + (TTTTA)n Simple_repeat Simple_repeat 5 72 0 7 1161 816 149 242 0 chr15 75537895 75538056 -27956918 - B3 SINE B2 -16 200 1 7 1161 763 242 20 59 chr15 75538060 75538262 -27956712 - B3A SINE B2 0 198 5 7 1161 202 316 0 26 chr15 75539785 75539863 -27955111 - MIR3 SINE MIR -24 184 109 7 1161 459 0 0 0 chr15 75542611 75542662 -27952312 + (CGTG)n Simple_repeat Simple_repeat 1 51 0 7 1161 317 214 56 93 chr15 75542967 75543075 -27951899 + PB1D10 SINE Alu 1 104 -13 8 1161 190 136 22 22 chr15 75548382 75548427 -27946547 + CT-rich Low_complexity Low_complexity 1 45 0 8 1161 1190 208 43 20 chr15 75548583 75548838 -27946136 + MTD LTR MaLR 2 262 -157 8 1161 180 0 0 0 chr15 75551632 75551652 -27943322 + (CAGA)n Simple_repeat Simple_repeat 1 20 0 8 1161 297 0 0 0 chr15 75554592 75554625 -27940349 + (GA)n Simple_repeat Simple_repeat 1 33 0 8 1161 1698 169 131 33 chr15 75555490 75555557 -27939417 - ORR1D1 LTR MaLR -4 370 312 8 1161 984 143 0 20 chr15 75555557 75555707 -27939267 + B1_Mur4 SINE Alu 2 148 -2 8 1161 1698 169 131 33 chr15 75555707 75555976 -27938998 - ORR1D1 LTR MaLR -63 311 1 8 1161 392 214 5 97 chr15 75557445 75557631 -27937343 + (CTGGGG)n Simple_repeat Simple_repeat 1 169 0 8 1161 252 0 0 0 chr15 75557894 75557922 -27937052 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 8 1161 428 259 35 0 chr15 75557922 75558038 -27936936 - B1_Mur1 SINE Alu -24 125 6 8 1161 227 303 0 63 chr15 75558395 75558490 -27936484 + G-rich Low_complexity Low_complexity 6 94 0 9 1161 348 303 134 0 chr15 75558961 75559102 -27935872 - L1MC LINE L1 -518 5815 5657 9 1161 237 345 0 22 chr15 75559400 75559492 -27935482 + C-rich Low_complexity Low_complexity 5 94 0 9 1161 552 250 81 0 chr15 75560675 75560811 -27934163 + B1_Mur2 SINE Alu 3 149 0 9 1161 750 151 0 0 chr15 75563604 75563776 -27931198 + (TG)n Simple_repeat Simple_repeat 2 173 0 9 1161 581 82 81 14 chr15 75563793 75563941 -27931033 + (TCTG)n Simple_repeat Simple_repeat 3 160 0 9 1161 543 201 0 0 chr15 75563945 75564124 -27930850 + (TG)n Simple_repeat Simple_repeat 2 180 0 9 1161 207 184 0 39 chr15 75564125 75564176 -27930798 + (TATG)n Simple_repeat Simple_repeat 2 50 0 9 1161 630 175 0 0 chr15 75564177 75564354 -27930620 + (TG)n Simple_repeat Simple_repeat 2 178 0 9 1161 294 281 61 20 chr15 75564436 75564534 -27930440 - ORR1E LTR MaLR -236 123 22 9 1161 420 320 5 38 chr15 75564754 75564939 -27930035 - HAL1-2a_MD LINE L1 -499 2525 2347 1 1161 256 196 36 0 chr15 75564941 75564997 -27929977 + (TGG)n Simple_repeat Simple_repeat 2 59 0 1 1161 485 247 118 108 chr15 75566744 75566939 -27928035 + B3A SINE B2 1 197 -1 1 1161 188 260 21 0 chr15 75568113 75568209 -27926765 + (TCCA)n Simple_repeat Simple_repeat 1 98 0 1 1161 597 185 0 0 chr15 75568199 75568318 -27926656 + (CATG)n Simple_repeat Simple_repeat 2 120 0 1 1161 238 358 6 132 chr15 75568616 75568790 -27926184 + MLT1J LTR MaLR 12 163 -285 1 1161 279 0 0 0 chr15 75568867 75568898 -27926076 + (CAAA)n Simple_repeat Simple_repeat 3 33 0 1 1161 245 304 251 12 chr15 75568924 75569087 -27925887 + MLT1J LTR MaLR 244 445 -67 1 1161 749 230 85 20 chr15 75569088 75569288 -27925686 + ID_B1 SINE B4 5 217 -7 1 1161 410 345 3 38 chr15 75570612 75570924 -27924050 + CT-rich Low_complexity Low_complexity 1 301 0 1 1161 535 220 46 0 chr15 75574359 75574468 -27920506 + PB1D9 SINE Alu 1 114 -6 1 1161 40 0 0 0 chr15 75577344 75577384 -27917590 + GC_rich Low_complexity Low_complexity 1 40 0 1 1161 216 97 0 0 chr15 75577734 75577765 -27917209 + (TGG)n Simple_repeat Simple_repeat 3 33 0 1 1161 39 50 0 0 chr15 75578067 75578127 -27916847 + GC_rich Low_complexity Low_complexity 1 60 0 1 1161 44 63 0 0 chr15 75578352 75578431 -27916543 + GC_rich Low_complexity Low_complexity 1 79 0 1 1161 264 213 31 41 chr15 75578661 75578759 -27916215 + (CCCCG)n Simple_repeat Simple_repeat 5 101 0 1 1161 794 196 42 0 chr15 75579829 75579972 -27915002 + B1_Mur4 SINE Alu 1 149 -1 1 1161 345 47 0 0 chr15 75579972 75580015 -27914959 + (CAAT)n Simple_repeat Simple_repeat 2 44 0 1 1161 230 220 28 39 chr15 75580383 75580463 -27914511 - MIRc SINE MIR -109 159 84 1 1161 953 141 7 0 chr15 75580726 75580861 -27914113 + B1_Mus2 SINE Alu 5 140 -7 1 1161 1057 79 24 0 chr15 75580863 75581027 -27913947 + (GAAAA)n Simple_repeat Simple_repeat 2 169 0 1 1161 260 309 52 43 chr15 75581071 75581186 -27913788 - MLT1E LTR MaLR -32 621 506 1 1161 986 213 51 14 chr15 75582036 75582250 -27912724 + ID_B1 SINE B4 3 224 0 1 1161 730 285 48 31 chr15 75582346 75582574 -27912400 + B4 SINE B4 2 233 -59 1 1161 212 59 0 29 chr15 75582772 75582807 -27912167 + (CCCCCA)n Simple_repeat Simple_repeat 2 35 0 1 1161 183 106 62 21 chr15 75585080 75585128 -27909846 + GA-rich Low_complexity Low_complexity 4 53 0 1 1161 239 340 113 0 chr15 75589604 75589789 -27905185 + MER33 DNA MER1_type 45 250 -74 1 1161 207 0 0 0 chr15 75590258 75590281 -27904693 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1161 3058 192 101 179 chr15 75590743 75591849 -27903125 + RMER1B Other Other 44 1063 -3 1 1161 308 235 111 0 chr15 75592545 75592626 -27902348 + L1M4 LINE L1 4285 4374 -1772 1 1161 285 296 12 24 chr15 75592629 75592712 -27902262 - ID4 SINE ID 0 83 2 1 1161 309 247 176 0 chr15 75592829 75592914 -27902060 + PB1D10 SINE Alu 2 101 -16 1 1161 441 0 0 0 chr15 75592918 75592967 -27902007 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1161 198 103 0 0 chr15 75593085 75593114 -27901860 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 1 1161 906 129 0 7 chr15 75593169 75593309 -27901665 + B1_Mur4 SINE Alu 11 149 -1 1 1161 28 0 0 0 chr15 75593309 75593337 -27901637 + AT_rich Low_complexity Low_complexity 1 28 0 1 1161 275 238 96 36 chr15 75593429 75593512 -27901462 + PB1D10 SINE Alu 29 116 -1 1 1161 777 220 85 52 chr15 75595420 75595631 -27899343 - ID_B1 SINE B4 -3 221 4 1 1161 1229 233 165 65 chr15 75595814 75596656 -27898318 + MTC-int LTR MaLR 78 1204 -54 1 1161 1161 64 0 0 chr15 75596656 75596797 -27898177 - B1_Mus1 SINE Alu -6 142 2 1 1161 543 200 12 39 chr15 75596817 75596951 -27898023 - B3 SINE B2 -32 163 41 1 1161 1621 210 104 23 chr15 75597025 75597411 -27897563 + MTD LTR MaLR 1 417 -2 1 1161 302 250 42 0 chr15 75597742 75597838 -27897136 + L1MDa LINE L1 1642 1741 -4892 1 1161 771 191 14 14 chr15 75597905 75598048 -27896926 - B1_Mur2 SINE Alu -6 143 1 1 1161 251 153 20 34 chr15 75598137 75598206 -27896768 - PB1 SINE Alu -228 86 23 1 1161 297 270 7 35 chr15 75598216 75598358 -27896616 + L1MDa LINE L1 2538 2675 -3862 1 1161 551 264 111 8 chr15 75598361 75598487 -27896487 + B1_Mur1 SINE Alu 1 139 -10 1 1161 229 158 78 13 chr15 75598487 75598564 -27896410 + (TA)n Simple_repeat Simple_repeat 1 82 0 1 1161 418 186 99 25 chr15 75598564 75598685 -27896289 + RLTR15 LTR ERVK 1 130 -229 1 1161 299 307 76 36 chr15 75598779 75599029 -27895945 + RLTR15 LTR ERVK 97 356 -3 1 1161 339 130 0 0 chr15 75599031 75599085 -27895889 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1161 664 278 99 6 chr15 75599096 75599277 -27895697 + B3A SINE B2 1 198 0 1 1161 644 171 152 142 chr15 75599313 75599524 -27895450 + B3 SINE B2 4 216 0 1 1161 670 201 69 35 chr15 75599534 75599678 -27895296 + B1_Mur4 SINE Alu 2 150 0 1 1161 504 48 0 0 chr15 75599713 75599776 -27895198 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 1161 267 286 71 7 chr15 75599776 75599931 -27895043 + L1MDa LINE L1 2676 2840 -3697 1 1161 287 250 188 0 chr15 75599951 75600063 -27894911 + B1F SINE Alu 7 139 -10 1 1161 1225 195 10 0 chr15 75600139 75600344 -27894630 - B3 SINE B2 -7 209 3 1 1161 547 302 84 11 chr15 75600362 75600553 -27894421 + B4A SINE B4 1 205 -87 1 1161 2081 139 14 49 chr15 75600547 75600917 -27894057 + ORR1B2 LTR MaLR 11 367 0 1 1161 413 281 0 0 chr15 75600917 75600999 -27893975 + B4A SINE B4 207 288 -4 1 1161 203 255 21 0 chr15 75601003 75601050 -27893924 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1161 926 296 5 5 chr15 75601115 75601339 -27893635 + ID_B1 SINE B4 1 224 0 1 1161 405 190 24 18 chr15 75601430 75601596 -27893378 + (CATATA)n Simple_repeat Simple_repeat 4 170 0 1 1161 974 147 0 7 chr15 75602093 75602244 -27892730 + B1_Mur4 SINE Alu 1 150 0 1 1161 335 261 258 29 chr15 75602370 75602847 -27892127 + L1MDa LINE L1 3158 3743 -2794 1 1161 324 313 36 25 chr15 75602911 75603088 -27891886 + L1MB5 LINE L1 3490 3664 -2479 1 1161 629 272 38 24 chr15 75603123 75603334 -27891640 + L1MB5 LINE L1 4072 4285 -1861 1 1161 692 304 122 46 chr15 75603364 75603429 -27891545 + L1MB5 LINE L1 5542 5606 -568 1 1161 1142 82 0 7 chr15 75603429 75603577 -27891397 + B1_Mus1 SINE Alu 2 148 0 1 1161 692 304 122 46 chr15 75603577 75604029 -27890945 + L1MB5 LINE L1 5607 6098 -76 1 1161 469 261 17 17 chr15 75604030 75604147 -27890827 - B1F2 SINE Alu -1 148 32 1 1161 307 253 0 0 chr15 75604240 75604315 -27890659 - ID4 SINE ID 0 83 9 1 1161 351 310 0 0 chr15 75604387 75604474 -27890500 + BC1_Mm scRNA scRNA 6 92 -60 1 1161 375 23 0 0 chr15 75607024 75607068 -27887906 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1161 192 243 203 0 chr15 75607271 75607345 -27887629 + MIR SINE MIR 81 169 -93 1 1161 804 194 16 0 chr15 75607733 75607862 -27887112 + B1_Mur1 SINE Alu 1 131 -18 1 1161 351 0 0 0 chr15 75609644 75609683 -27885291 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1161 313 235 54 6 chr15 75610594 75610761 -27884213 + GA-rich Low_complexity Low_complexity 5 179 0 1 1161 529 228 2 32 chr15 75610799 75611343 -27883631 + GA-rich Low_complexity Low_complexity 1 527 0 1 1161 662 179 115 36 chr15 75613306 75613445 -27881529 + B1_Mur4 SINE Alu 1 150 0 1 1161 988 125 28 0 chr15 75616240 75616384 -27878590 + B1_Mus1 SINE Alu 1 148 0 1 1161 713 97 44 15 chr15 75616398 75616534 -27878440 + GA-rich Low_complexity Low_complexity 5 144 0 1 1161 490 229 55 0 chr15 75618733 75618842 -27876132 - PB1D7 SINE Alu -5 115 1 1 1161 21 0 0 0 chr15 75621935 75621956 -27873018 + GC_rich Low_complexity Low_complexity 1 21 0 1 1161 378 0 0 0 chr15 75622529 75622571 -27872403 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1161 239 281 260 12 chr15 75623735 75623945 -27871029 + L1M5 LINE L1 4932 5207 -939 1 1161 333 233 55 0 chr15 75623945 75624018 -27870956 + ID4 SINE ID 4 80 -3 1 1161 284 253 125 3 chr15 75624018 75624149 -27870825 + L1M5 LINE L1 5208 5358 -788 1 1161 579 272 0 0 chr15 75624225 75624350 -27870624 + RSINE1 SINE B4 3 127 -38 1 1161 306 0 0 0 chr15 75624355 75624389 -27870585 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1161 715 329 92 6 chr15 75624731 75625077 -27869897 - MLT1B LTR MaLR -14 376 1 1 1162 962 229 50 0 chr15 75629237 75629438 -27865536 + B3 SINE B2 2 212 -4 1 1162 23 0 0 0 chr15 75630010 75630033 -27864941 + AT_rich Low_complexity Low_complexity 1 23 0 1 1162 892 43 0 0 chr15 75631619 75631734 -27863240 - B2_Mm2 SINE B2 -80 115 1 1 1162 401 308 141 0 chr15 75631822 75632056 -27862918 + L1MC4 LINE L1 6815 7081 -961 1 1162 259 260 58 0 chr15 75632529 75632633 -27862341 + L1MC4 LINE L1 7933 8042 0 1 1162 544 328 81 73 chr15 75634886 75635007 -27859967 + MLT1A LTR MaLR 3 115 -259 1 1162 1611 37 0 40 chr15 75635007 75635206 -27859768 + B2_Mm1a SINE B2 3 193 0 1 1162 544 328 81 73 chr15 75635206 75635453 -27859521 + MLT1A LTR MaLR 116 374 0 1 1162 735 206 64 0 chr15 75641463 75641604 -27853370 - RSINE1 SINE B4 -14 151 2 1 1162 859 271 0 0 chr15 75641720 75641901 -27853073 + B3A SINE B2 2 182 -16 1 1162 635 172 22 52 chr15 75641941 75642076 -27852898 + B1_Mur1 SINE Alu 19 149 0 1 1162 201 74 0 0 chr15 75645933 75645960 -27849014 + (GGGA)n Simple_repeat Simple_repeat 3 29 0 1 1162 285 51 0 0 chr15 75645986 75646025 -27848949 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 1 1162 192 77 0 0 chr15 75647354 75647380 -27847594 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1162 339 266 44 0 chr15 75647748 75647861 -27847113 + Lx5 LINE L1 6933 7050 0 1 1162 279 0 0 0 chr15 75651796 75651827 -27843147 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1162 243 188 0 0 chr15 75654841 75654889 -27840085 + CT-rich Low_complexity Low_complexity 3 50 0 1 1162 697 138 15 37 chr15 75656189 75656324 -27838650 - Lx LINE L1 0 6654 6523 1 1162 1979 222 47 10 chr15 75656370 75656774 -27838200 + MTD LTR MaLR 1 419 0 1 1162 240 263 117 17 chr15 75657009 75657129 -27837845 + L1MEg LINE L1 673 804 -5438 1 1162 303 49 0 0 chr15 75657139 75657180 -27837794 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1162 237 255 116 139 chr15 75657228 75657308 -27837666 + MT2B LTR ERVL 69 144 -457 2 1162 359 220 10 117 chr15 75657308 75657411 -27837563 + PB1D9 SINE Alu 1 92 -28 2 1162 248 217 142 21 chr15 75657516 75657657 -27837317 + L1MEg LINE L1 2830 2987 -3159 1 1162 600 197 172 0 chr15 75657659 75657781 -27837193 + RSINE1 SINE B4 5 147 -18 2 1162 207 0 0 0 chr15 75657783 75657806 -27837168 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 1162 1134 76 0 7 chr15 75661966 75662111 -27832863 - B1_Mus2 SINE Alu -2 145 2 2 1162 279 0 0 0 chr15 75662220 75662251 -27832723 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1162 364 226 178 25 chr15 75662601 75662719 -27832255 + ID_B1 SINE B4 80 215 -9 2 1162 298 252 0 124 chr15 75662748 75662861 -27832113 + PB1 SINE Alu 26 124 -3 2 1162 31 68 0 0 chr15 75663933 75663992 -27830982 + AT_rich Low_complexity Low_complexity 1 59 0 2 1162 887 185 0 27 chr15 75663992 75664142 -27830832 - B1_Mus2 SINE Alu 0 147 2 2 1162 731 261 20 45 chr15 75664150 75664351 -27830623 - B3A SINE B2 0 198 3 2 1162 382 299 40 64 chr15 75664365 75664491 -27830483 - B3A SINE B2 -9 207 82 2 1162 1202 48 7 0 chr15 75664491 75664637 -27830337 + B1_Mus1 SINE Alu 2 148 0 2 1162 382 322 65 26 chr15 75664637 75664697 -27830277 - B3A SINE B2 -117 81 23 2 1162 300 296 44 22 chr15 75671306 75671396 -27823578 + L1MEg LINE L1 1842 1933 -4151 2 1162 512 165 75 97 chr15 75672643 75672777 -27822197 - B1F2 SINE Alu -1 148 18 2 1162 264 315 45 0 chr15 75672928 75673039 -27821935 + L1M3 LINE L1 5593 5708 -475 2 1162 789 151 14 7 chr15 75673084 75673224 -27821750 - B1_Mur2 SINE Alu -1 148 8 2 1162 549 266 56 33 chr15 75673224 75673298 -27821676 - ID_B1 SINE B4 0 224 6 2 1162 1608 16 0 20 chr15 75673385 75673581 -27821393 + B2_Mm1a SINE B2 1 192 -1 2 1162 535 173 50 131 chr15 75673609 75673769 -27821205 + B1_Mus1 SINE Alu 2 148 0 2 1162 6274 133 15 62 chr15 75673687 75674921 -27820053 + ORR1A4-int LTR MaLR 788 1963 0 2 1162 1842 107 54 69 chr15 75674921 75675254 -27819720 + ORR1A4 LTR MaLR 1 328 -1 2 1162 451 327 6 62 chr15 75675620 75675725 -27819249 + RSINE1 SINE B4 15 111 -54 2 1162 1093 48 0 40 chr15 75675725 75675876 -27819098 + B1_Mm SINE Alu 2 146 -1 2 1162 451 327 6 62 chr15 75675876 75675930 -27819044 + RSINE1 SINE B4 112 165 0 2 1162 774 145 65 7 chr15 75676132 75676271 -27818703 + B1_Mus1 SINE Alu 1 147 -1 2 1162 1026 110 0 0 chr15 75676276 75676422 -27818552 + B1_Mus2 SINE Alu 1 146 -1 2 1162 800 239 40 5 chr15 75676938 75677140 -27817834 - B3 SINE B2 -6 210 2 2 1162 304 248 40 128 chr15 75677300 75677378 -27817596 + MLT1A0 LTR MaLR 11 82 -283 2 1162 1262 101 5 5 chr15 75677378 75677567 -27817407 + B2_Mm1a SINE B2 2 190 -3 2 1162 304 248 40 128 chr15 75677567 75677613 -27817361 + MLT1A0 LTR MaLR 83 124 -241 2 1162 868 64 4 52 chr15 75677678 75677834 -27817140 - B1_Mm SINE Alu -2 145 1 2 1162 1222 215 70 32 chr15 75677845 75678157 -27816817 + MT2A LTR ERVL 1 324 -209 2 1162 764 162 99 29 chr15 75678400 75678572 -27816402 - B2_Mm2 SINE B2 -10 185 2 2 1162 576 190 119 26 chr15 75678868 75679019 -27815955 + RSINE1 SINE B4 1 165 0 2 1162 459 296 103 36 chr15 75679116 75679281 -27815693 - B3A SINE B2 -16 182 7 2 1162 1158 35 14 0 chr15 75679310 75679455 -27815519 - B1_Mus2 SINE Alu 0 147 1 2 1162 769 171 200 0 chr15 75679737 75679912 -27815062 + B3 SINE B2 2 211 -5 2 1162 711 181 28 7 chr15 75680241 75680386 -27814588 - B1_Mus1 SINE Alu 0 148 1 2 1162 805 223 30 36 chr15 75680757 75680999 -27813975 + Lx5 LINE L1 6831 7058 0 2 1162 1553 47 0 0 chr15 75681024 75681217 -27813757 + B2_Mm1t SINE B2 1 193 0 2 1162 363 121 0 0 chr15 75681797 75681855 -27813119 + (T)n Simple_repeat Simple_repeat 1 58 0 2 1162 1161 68 0 0 chr15 75681877 75682025 -27812949 + B1_Mus1 SINE Alu 1 148 0 2 1162 1257 53 59 0 chr15 75682029 75682199 -27812775 - B2_Mm2 SINE B2 -14 181 2 2 1162 1168 78 6 6 chr15 75682229 75682388 -27812586 + B2_Mm1a SINE B2 1 160 -33 2 1162 393 22 0 0 chr15 75682388 75682434 -27812540 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 2 1162 243 128 0 21 chr15 75682444 75682492 -27812482 + B2_Mm2 SINE B2 126 172 -23 2 1162 584 120 421 0 chr15 75682492 75682625 -27812349 - B2_Mm2 SINE B2 -5 190 2 2 1162 1311 78 10 25 chr15 75682628 75682824 -27812150 - B2_Mm2 SINE B2 0 195 3 2 1162 723 123 31 62 chr15 75682834 75682964 -27812010 - B1_Mur4 SINE Alu -6 144 19 2 1162 558 0 0 0 chr15 75683126 75683188 -27811786 + (GTTTG)n Simple_repeat Simple_repeat 3 64 0 2 1162 315 0 0 0 chr15 75683189 75683224 -27811750 + (TTGG)n Simple_repeat Simple_repeat 2 36 0 2 1162 1137 50 0 0 chr15 75683224 75683363 -27811611 - B1_Mus1 SINE Alu -9 139 1 2 1162 795 148 42 0 chr15 75683393 75683535 -27811439 + B1_Mus1 SINE Alu 1 148 0 2 1162 1387 58 16 16 chr15 75684076 75684267 -27810707 + B2_Mm2 SINE B2 3 193 -2 2 1162 2543 202 30 58 chr15 75684315 75684940 -27810034 + RLTR18 LTR ERVK 5 612 -4 2 1162 3060 63 2 2 chr15 75685785 75686181 -27808793 - MTA_Mm LTR MaLR 0 396 1 2 1162 292 331 152 21 chr15 75688371 75688516 -27806458 + RSINE1 SINE B4 2 165 0 2 1162 327 130 0 0 chr15 75688536 75688590 -27806384 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1162 673 197 14 7 chr15 75688713 75688856 -27806118 + B1F2 SINE Alu 1 144 -5 2 1162 275 371 12 0 chr15 75689084 75689251 -27805723 + (CA)n Simple_repeat Simple_repeat 1 169 0 2 1162 648 276 153 106 chr15 75689262 75689613 -27805361 - MTD LTR MaLR -12 407 1 2 1162 303 28 0 0 chr15 75690036 75690072 -27804902 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1162 297 0 0 0 chr15 75690072 75690104 -27804870 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 1162 575 275 82 26 chr15 75690884 75691078 -27803896 - B3 SINE B2 0 216 12 2 1162 287 238 12 12 chr15 75691136 75691228 -27803746 - L1MB8 LINE L1 0 6184 6091 2 1162 692 226 0 0 chr15 75691236 75691373 -27803601 + B1_Mur1 SINE Alu 4 140 -9 2 1162 228 100 0 0 chr15 75691512 75691552 -27803422 + (TTGG)n Simple_repeat Simple_repeat 4 43 0 2 1162 422 231 1 10 chr15 75691823 75691956 -27803018 + B3A SINE B2 1 213 -3 2 1162 395 264 198 18 chr15 75692087 75692365 -27802609 - L1MB8 LINE L1 -531 5653 5326 2 1162 1161 54 0 0 chr15 75692397 75692545 -27802429 + B1_Mus1 SINE Alu 1 148 0 2 1162 180 0 0 0 chr15 75692656 75692676 -27802298 + (GGA)n Simple_repeat Simple_repeat 1 20 0 2 1162 381 93 0 0 chr15 75693608 75693662 -27801312 + (TCC)n Simple_repeat Simple_repeat 3 56 0 2 1162 38 0 0 0 chr15 75694180 75694218 -27800756 + AT_rich Low_complexity Low_complexity 1 38 0 2 1162 399 91 0 5 chr15 75694231 75694296 -27800678 - B2_Mm2 SINE B2 -107 109 47 2 1162 794 93 27 331 chr15 75694324 75694581 -27800393 - B2_Mm2 SINE B2 -14 181 3 2 1162 423 0 0 0 chr15 75695755 75695802 -27799172 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1162 268 189 38 0 chr15 75697967 75698020 -27796954 - RMER15 LTR ERVL 0 575 521 2 1162 2169 143 42 18 chr15 75698021 75698104 -27796870 - ORR1B1 LTR MaLR 0 394 318 2 1162 3103 56 0 10 chr15 75698104 75698504 -27796470 - MTA_Mm LTR MaLR 0 396 1 2 1162 2169 143 42 18 chr15 75698504 75698805 -27796169 - ORR1B1 LTR MaLR -77 317 1 2 1162 1722 230 35 40 chr15 75698805 75699255 -27795719 - RMER15 LTR ERVL -51 524 77 2 1162 1495 52 5 0 chr15 75699763 75699954 -27795020 - B2_Mm1a SINE B2 -1 192 1 2 1162 293 291 9 88 chr15 75699982 75700095 -27794879 - RMER10B LTR ERVL -26 372 269 2 1162 219 69 0 0 chr15 75700656 75700685 -27794289 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1162 1175 35 0 0 chr15 75700687 75700829 -27794145 - B1_Mm SINE Alu -3 144 3 2 1162 2983 62 5 54 chr15 75701034 75701234 -27793740 + MTB_Mm LTR MaLR 1 196 -211 2 1162 1377 84 26 0 chr15 75701234 75701424 -27793550 + B2_Mm2 SINE B2 1 195 0 2 1162 2983 62 5 54 chr15 75701424 75701651 -27793323 + MTB_Mm LTR MaLR 197 407 0 2 1162 442 202 30 10 chr15 75701765 75701865 -27793109 + LSU-rRNA_Hsa rRNA rRNA 4204 4305 -730 2 1162 881 286 124 97 chr15 75701865 75702420 -27792554 - MYSERV6-int LTR ERVK -2416 3721 3150 2 1162 181 0 69 0 chr15 75702420 75702449 -27792525 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 2 1162 1632 272 83 46 chr15 75702449 75703249 -27791725 - MYSERV6-int LTR ERVK -276 8683 8088 2 1162 1115 35 21 7 chr15 75703292 75703437 -27791537 - B1_Mm SINE Alu 0 147 1 2 1162 279 195 33 54 chr15 75703451 75703543 -27791431 - RLTR19-int LTR ERVK -3928 2209 2120 2 1162 730 127 13 0 chr15 75703574 75703724 -27791250 - RMER17A2 LTR ERVK -393 513 362 2 1162 323 164 0 0 chr15 75704198 75704253 -27790721 - ORR1B1 LTR MaLR 0 384 330 2 1162 339 25 0 0 chr15 75704255 75704295 -27790679 + (T)n Simple_repeat Simple_repeat 1 40 0 2 1162 1537 32 21 0 chr15 75704295 75704483 -27790491 - B2_Mm1a SINE B2 0 193 2 2 1162 843 86 0 0 chr15 75704486 75704603 -27790371 + (TTTC)n Simple_repeat Simple_repeat 2 118 0 2 1162 1157 56 0 0 chr15 75704603 75704747 -27790227 - B1_Mm SINE Alu -3 144 1 2 1162 594 0 0 0 chr15 75704750 75704816 -27790158 + (TTTC)n Simple_repeat Simple_repeat 1 66 0 2 1162 1264 89 0 38 chr15 75704816 75705002 -27789972 - B2_Mm2 SINE B2 -15 180 2 2 1162 442 50 0 12 chr15 75705002 75705110 -27789864 - B2_Mm2 SINE B2 -5 190 48 2 1162 729 113 150 0 chr15 75705154 75705287 -27789687 - B2_Mm1t SINE B2 -14 179 27 2 1162 998 85 0 0 chr15 75705306 75705447 -27789527 - B1_Mus1 SINE Alu 0 148 8 2 1162 1799 111 101 37 chr15 75705489 75705567 -27789407 - ORR1B1 LTR MaLR -41 353 275 2 1162 1437 196 138 21 chr15 75705567 75705891 -27789083 - RLTR23 LTR ERV1 0 430 61 2 1162 878 115 22 0 chr15 75705891 75706030 -27788944 - B1_Mm SINE Alu -5 142 1 2 1162 1437 196 138 21 chr15 75706030 75706090 -27788884 - RLTR23 LTR ERV1 -370 60 1 2 1162 1799 111 101 37 chr15 75706090 75706339 -27788635 - ORR1B1 LTR MaLR -120 274 5 2 1162 1063 217 67 44 chr15 75706349 75706619 -27788355 - ORR1A4 LTR MaLR -108 276 1 3 1162 1009 149 12 0 chr15 75706959 75707127 -27787847 + URR1B DNA MER1_type 56 225 0 3 1162 714 188 187 32 chr15 75707225 75707412 -27787562 + B3 SINE B2 1 216 0 3 1162 372 208 35 62 chr15 75707431 75707544 -27787430 + PB1D9 SINE Alu 10 119 -1 3 1162 1116 68 0 0 chr15 75707581 75707727 -27787247 + B1_Mus2 SINE Alu 1 146 -1 3 1162 851 172 193 6 chr15 75707761 75707942 -27787032 - B3 SINE B2 0 216 2 3 1162 930 127 23 11 chr15 75707974 75708149 -27786825 + CT-rich Low_complexity Low_complexity 2 178 0 3 1162 847 149 0 21 chr15 75708188 75708332 -27786642 - B1_Mur3 SINE Alu -7 142 2 3 1162 599 245 50 0 chr15 75708334 75708493 -27786481 - L1_Mur3 LINE L1 -425 5455 5289 3 1162 698 202 80 11 chr15 75708493 75708668 -27786306 - B3A SINE B2 -6 192 6 3 1162 501 320 89 51 chr15 75708706 75708862 -27786112 - L1M2 LINE L1 -819 5324 5162 3 1162 1040 75 0 0 chr15 75708862 75708996 -27785978 + B1_Mus1 SINE Alu 2 135 -13 3 1162 501 308 296 42 chr15 75708996 75709364 -27785610 - L1M2 LINE L1 -982 5161 4688 3 1162 1203 73 90 0 chr15 75709364 75709542 -27785432 + B2_Mm2 SINE B2 2 195 0 3 1162 290 278 89 10 chr15 75709542 75709677 -27785297 - L1M2 LINE L1 -1456 4687 4541 3 1162 380 221 0 0 chr15 75709833 75709910 -27785064 - ORR1B1-int LTR MaLR -43 1466 1390 3 1162 892 110 51 26 chr15 75709910 75710080 -27784894 + B2_Mm2 SINE B2 3 179 -37 3 1162 5504 120 69 62 chr15 75710091 75711207 -27783767 - ORR1A4-int LTR MaLR -136 1827 619 3 1162 1350 253 87 50 chr15 75711193 75711676 -27783298 + RLTR20B3 LTR ERVK 21 521 -56 3 1162 629 165 104 15 chr15 75711707 75711842 -27783132 - MT2B LTR ERVL -437 164 18 3 1162 260 89 44 0 chr15 75711885 75711930 -27783044 - ORR1A4-int LTR MaLR -1304 659 613 3 1162 266 67 44 0 chr15 75711961 75712006 -27782968 - ORR1A4-int LTR MaLR -1304 659 613 3 1162 335 119 34 0 chr15 75711999 75712058 -27782916 - ORR1A4-int LTR MaLR -1304 659 599 3 1162 656 154 0 0 chr15 75712062 75712180 -27782794 + ORR1A3-int LTR MaLR 377 501 -1008 3 1162 1015 57 35 14 chr15 75712180 75712323 -27782651 + B1_Mus2 SINE Alu 2 147 0 3 1162 367 214 37 30 chr15 75712323 75712348 -27782626 + ORR1A3-int LTR MaLR 502 530 -979 3 1162 1931 173 44 0 chr15 75712380 75712744 -27782230 - ORR1A4-int LTR MaLR -1583 380 1 3 1162 2085 79 12 60 chr15 75712750 75713085 -27781889 - ORR1A4 LTR MaLR -10 319 1 3 1162 256 185 74 0 chr15 75713085 75713138 -27781836 - PB1D10 SINE Alu -16 101 45 3 1162 761 216 64 69 chr15 75713345 75713549 -27781425 - B3 SINE B2 -2 214 12 3 1162 229 295 79 11 chr15 75713688 75713777 -27781197 - L2c LINE L2 -24 3363 3269 3 1162 28 0 0 0 chr15 75717779 75717807 -27777167 + AT_rich Low_complexity Low_complexity 1 28 0 3 1162 1658 155 100 36 chr15 75720092 75720453 -27774521 + ORR1C2 LTR MaLR 1 384 0 3 1162 1896 178 58 23 chr15 75720883 75721310 -27773664 + RMER10A LTR ERVL 1 442 0 3 1162 238 214 42 28 chr15 75723454 75723526 -27771448 + PB1D10 SINE Alu 42 114 -3 3 1162 249 238 98 0 chr15 75725178 75725275 -27769699 + PB1D9 SINE Alu 10 120 0 3 1162 552 251 65 35 chr15 75725279 75725448 -27769526 - B3 SINE B2 -38 178 5 3 1162 818 114 47 60 chr15 75728119 75728268 -27766706 - B1_Mm SINE Alu 0 147 1 3 1162 860 200 108 20 chr15 75728816 75729020 -27765954 + URR1B DNA MER1_type 1 222 -3 3 1162 364 322 65 29 chr15 75729020 75729228 -27765746 + MLT1D LTR MaLR 255 471 -34 3 1162 392 344 108 82 chr15 75729449 75729864 -27765110 + MLT1D-int LTR MaLR 424 849 -522 3 1162 283 266 53 11 chr15 75730345 75730440 -27764534 + MLT1D LTR MaLR 399 497 -8 3 1162 26 0 0 0 chr15 75731232 75731258 -27763716 + AT_rich Low_complexity Low_complexity 1 26 0 3 1162 222 150 0 0 chr15 75734094 75734134 -27760840 + (CGG)n Simple_repeat Simple_repeat 2 41 0 3 1162 285 29 0 0 chr15 75736992 75737026 -27757948 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1162 27 62 0 0 chr15 75740131 75740179 -27754795 + GC_rich Low_complexity Low_complexity 1 48 0 3 1162 41 58 0 0 chr15 75740317 75740386 -27754588 + GC_rich Low_complexity Low_complexity 1 69 0 3 1162 406 235 0 0 chr15 75744013 75744094 -27750880 + ID4_ SINE ID 3 83 0 3 1162 423 83 0 0 chr15 75744356 75744416 -27750558 + (TA)n Simple_repeat Simple_repeat 1 60 0 3 1162 234 0 0 0 chr15 75746098 75746124 -27748850 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1162 547 274 108 21 chr15 75746823 75747017 -27747957 - RMER15 LTR ERVL -13 562 352 3 1162 414 315 0 37 chr15 75748153 75748288 -27746686 + RMER10B LTR ERVL 269 398 0 3 1162 1286 125 0 34 chr15 75748288 75748493 -27746481 + URR1B DNA MER1_type 27 224 -1 3 1162 480 259 28 96 chr15 75748493 75748530 -27746444 - CYRA11_Mm Unknown Y-chromosome -453 164 143 3 1162 702 245 13 107 chr15 75750047 75750271 -27744703 + B3 SINE B2 2 204 -12 3 1162 828 155 48 34 chr15 75750291 75750438 -27744536 + B1_Mur4 SINE Alu 1 149 -1 3 1162 255 336 26 85 chr15 75751148 75751215 -27743759 + MT2B LTR ERVL 97 154 -447 3 1162 505 168 128 24 chr15 75751215 75751338 -27743636 + B1_Mur1 SINE Alu 1 137 -12 3 1162 848 45 18 0 chr15 75751338 75751450 -27743524 + (GAAAA)n Simple_repeat Simple_repeat 1 114 0 3 1162 252 0 0 0 chr15 75751997 75752025 -27742949 + (CGGGG)n Simple_repeat Simple_repeat 2 29 0 3 1162 22 0 0 0 chr15 75752398 75752420 -27742554 + AT_rich Low_complexity Low_complexity 1 22 0 3 1162 626 197 107 0 chr15 75752605 75752727 -27742247 + B1_Mur4 SINE Alu 1 135 -15 3 1162 264 91 0 0 chr15 75752727 75752771 -27742203 + (CTAA)n Simple_repeat Simple_repeat 1 44 0 3 1162 785 251 130 28 chr15 75753792 75754184 -27740790 + MT2A LTR ERVL 41 595 -6 3 1162 315 0 0 0 chr15 75755027 75755062 -27739912 + (CAGGC)n Simple_repeat Simple_repeat 5 39 0 3 1162 1203 74 0 0 chr15 75756973 75757121 -27737853 - B1_Mus1 SINE Alu 0 148 1 3 1162 766 121 60 60 chr15 75758249 75758398 -27736576 + B1_Mur4 SINE Alu 1 149 -1 3 1162 796 184 250 0 chr15 75758450 75758618 -27736356 + B3 SINE B2 1 210 -6 3 1163 512 304 0 7 chr15 75760722 75760858 -27734116 + RSINE1 SINE B4 27 161 -4 3 1163 542 168 0 50 chr15 75761017 75761117 -27733857 + B1_Mm SINE Alu 5 99 -48 3 1163 1532 39 28 0 chr15 75761138 75761320 -27733654 - B2_Mm2 SINE B2 -7 188 2 3 1163 1403 244 57 62 chr15 75761372 75761582 -27733392 - MurERV4-int LTR ERVK -4362 898 656 3 1163 270 69 0 9 chr15 75761582 75761630 -27733344 - B2_Mm2 SINE B2 -107 109 64 3 1163 1403 244 57 62 chr15 75761630 75761685 -27733289 - MurERV4-int LTR ERVK -4362 655 591 3 1163 1208 87 52 11 chr15 75761685 75761859 -27733115 - B2_Mm2 SINE B2 -13 182 2 3 1163 1403 223 73 48 chr15 75761859 75762226 -27732748 - MurERV4-int LTR ERVK -4670 590 91 3 1163 1623 195 189 87 chr15 75762246 75762751 -27732223 + RMER19B LTR ERVK 308 886 -16 3 1163 1411 73 6 6 chr15 75762751 75762931 -27732043 + B2_Mm2 SINE B2 2 181 -14 3 1163 1623 195 189 87 chr15 75762931 75762965 -27732009 + RMER19B LTR ERVK 887 902 0 3 1163 834 184 36 18 chr15 75762970 75763192 -27731782 - RMER17C LTR ERVK -184 226 1 3 1163 575 163 0 0 chr15 75764360 75764452 -27730522 - B1_Mur1 SINE Alu -3 146 55 3 1163 1666 121 16 60 chr15 75764668 75764984 -27729990 + RLTRETN_Mm LTR ERVK 21 322 0 3 1163 785 141 22 29 chr15 75764998 75765137 -27729837 - B1_Mur3 SINE Alu 0 149 12 3 1163 873 296 142 49 chr15 75765245 75765753 -27729221 - RMER13A LTR ERVK -210 650 96 3 1163 414 0 0 0 chr15 75765772 75765818 -27729156 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 3 1163 486 0 0 0 chr15 75765872 75765926 -27729048 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 3 1163 1060 91 7 7 chr15 75765927 75766082 -27728892 - B2_Mm1a SINE B2 -38 155 1 3 1163 538 135 96 0 chr15 75766462 75766549 -27728425 + MTC LTR MaLR 10 106 -315 3 1163 950 158 227 3 chr15 75766549 75766839 -27728135 + RMER6C LTR ERVK 1 355 -335 3 1163 884 262 0 32 chr15 75766894 75767142 -27727832 + RLTR11B LTR ERVK 3 242 -211 3 1163 487 263 10 176 chr15 75767148 75767443 -27727531 + RLTR11B LTR ERVK 200 445 -8 3 1163 249 208 0 0 chr15 75767445 75767522 -27727452 + (CAGTT)n Simple_repeat Simple_repeat 1 77 0 3 1163 1239 149 0 0 chr15 75767528 75767736 -27727238 + RMER6C LTR ERVK 483 690 0 3 1163 1682 160 25 19 chr15 75767736 75768055 -27726919 + MTC LTR MaLR 93 413 -8 3 1163 673 237 48 37 chr15 75768059 75768281 -27726693 + MTC-int LTR MaLR 1 257 -1001 3 1163 7866 58 0 0 chr15 75768281 75769303 -27725671 + L1Md_F2 LINE L1 4565 5586 -297 3 1163 8301 42 5 1 chr15 75769303 75770295 -27724679 + L1Md_F2 LINE L1 5587 6582 0 3 1163 1987 137 18 15 chr15 75770295 75770628 -27724346 + MTC-int LTR MaLR 245 578 -680 3 1163 1006 191 5 63 chr15 75770742 75770965 -27724009 + B3 SINE B2 1 210 -6 3 1163 360 77 0 0 chr15 75772397 75772449 -27722525 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1163 2008 149 196 7 chr15 75773127 75773757 -27721217 - RMER6C LTR ERVK -12 744 1 3 1163 1001 179 20 10 chr15 75773757 75773943 -27721031 - B3 SINE B2 -20 196 9 3 1163 415 235 12 0 chr15 75774052 75774133 -27720841 + ID4 SINE ID 1 82 -1 3 1163 2014 95 60 32 chr15 75774393 75774709 -27720265 - ORR1A3 LTR MaLR 0 326 2 3 1163 243 333 104 0 chr15 75774774 75774909 -27720065 - L2 LINE L2 -549 2870 2722 3 1163 28 61 0 0 chr15 75775005 75775054 -27719920 + AT_rich Low_complexity Low_complexity 1 49 0 3 1163 1371 64 43 5 chr15 75775238 75775426 -27719548 - B2_Mm2 SINE B2 0 195 1 3 1163 763 194 150 37 chr15 75775823 75775852 -27719122 - B3 SINE B2 -7 209 166 3 1163 303 85 0 0 chr15 75775852 75775899 -27719075 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1163 763 194 150 37 chr15 75775899 75776056 -27718918 - B3 SINE B2 -51 165 2 3 1163 1008 132 84 6 chr15 75776232 75776258 -27718716 - B2_Mm2 SINE B2 -14 181 156 3 1163 255 61 0 0 chr15 75776258 75776291 -27718683 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 3 1163 1008 132 84 6 chr15 75776291 75776431 -27718543 - B2_Mm2 SINE B2 -40 155 2 3 1163 786 214 7 0 chr15 75776513 75776658 -27718316 + B1_Mur1 SINE Alu 2 147 -2 3 1163 363 266 100 71 chr15 75776654 75776824 -27718150 - MER2 DNA MER2_type -84 261 87 3 1163 321 341 33 33 chr15 75778202 75778424 -27716550 + MMSAT4 Satellite Satellite 1 222 0 3 1163 271 323 34 34 chr15 75778790 75778999 -27715975 + MMSAT4 Satellite Satellite 1 209 0 3 1163 227 31 31 0 chr15 75779867 75779899 -27715075 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 3 1163 562 196 52 9 chr15 75779899 75780021 -27714953 - PB1D10 SINE Alu 0 150 16 3 1163 3684 122 38 10 chr15 75780512 75781124 -27713850 - RLTR33 LTR ERVK -49 629 1 3 1163 707 221 77 18 chr15 75781318 75781453 -27713521 + B3 SINE B2 33 166 -50 3 1163 282 56 0 0 chr15 75781453 75781489 -27713485 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1163 707 221 77 18 chr15 75781489 75781523 -27713451 + B3 SINE B2 167 211 -5 3 1163 735 251 55 0 chr15 75781917 75782116 -27712858 + B3 SINE B2 3 212 -4 3 1163 882 149 0 0 chr15 75782117 75782258 -27712716 - B1_Mur3 SINE Alu 0 149 9 4 1163 1289 73 5 50 chr15 75782649 75782851 -27712123 + B2_Mm1a SINE B2 1 193 0 4 1163 317 98 78 0 chr15 75783174 75783225 -27711749 - ORR1A2 LTR MaLR 0 326 272 4 1163 1163 77 18 0 chr15 75783223 75783393 -27711581 - B2_Mm2 SINE B2 -20 175 3 4 1163 2100 56 7 24 chr15 75783393 75783687 -27711287 - ORR1A2 LTR MaLR -38 289 1 4 1163 1238 118 32 28 chr15 75783687 75783905 -27711069 - ORR1A2-int LTR MaLR 0 1963 1745 4 1163 6662 112 47 79 chr15 75783922 75785101 -27709873 + RMER16-int LTR ERVK 69 1222 -4184 4 1163 1118 61 0 26 chr15 75785101 75785252 -27709722 - B1_Mus1 SINE Alu 0 148 2 4 1163 6662 112 47 79 chr15 75785252 75785332 -27709642 + RMER16-int LTR ERVK 1223 1287 -4119 4 1163 1507 156 88 112 chr15 75785335 75785711 -27709263 - RMER16 LTR ERVK -12 521 155 4 1163 1408 95 0 23 chr15 75785711 75785927 -27709047 + RMER16-int LTR ERVK 1306 1516 -3890 4 1163 885 128 0 0 chr15 75785924 75786065 -27708909 + RMER16-int LTR ERVK 2565 2705 -2701 4 1163 5333 78 13 11 chr15 75786059 75786818 -27708156 + RMER16-int LTR ERVK 4646 5406 0 4 1163 2627 86 61 10 chr15 75786818 75787251 -27707723 + RMER16 LTR ERVK 1 533 0 4 1163 2164 159 12 0 chr15 75787251 75787673 -27707301 - ORR1A2-int LTR MaLR -819 1144 718 4 1163 663 176 0 127 chr15 75787632 75787782 -27707192 - MT2B LTR ERVL -314 287 157 4 1163 1603 119 48 26 chr15 75787734 75788044 -27706930 - ORR1A2-int LTR MaLR -1188 604 288 4 1163 2589 68 143 139 chr15 75788044 75788554 -27706420 - RLTR1B LTR ERV1 0 512 1 4 1163 442 17 0 0 chr15 75788554 75788614 -27706360 - RLTR1B-int LTR ERV1 0 3299 3240 4 1163 2944 151 7 42 chr15 75788636 75788667 -27706307 - RLTR11A LTR ERVK 0 528 507 4 1163 1456 48 11 0 chr15 75788667 75788853 -27706121 - B2_Mm2 SINE B2 -7 188 1 4 1163 2944 151 7 42 chr15 75788853 75789362 -27705612 - RLTR11A LTR ERVK -22 506 7 4 1163 877 211 77 9 chr15 75789368 75789588 -27705386 - RMER19A LTR ERVK -14 723 489 4 1163 622 262 48 0 chr15 75789579 75789747 -27705227 - RMER19A LTR ERVK -355 382 207 4 1163 835 313 45 7 chr15 75791091 75791512 -27703462 + MuRRS4-int LTR ERV1 1306 1742 -3321 4 1163 322 281 7 41 chr15 75791707 75791852 -27703122 + MuRRS4-int LTR ERV1 2690 2829 -4727 4 1163 777 338 30 23 chr15 75791894 75792333 -27702641 + MuRRS4-int LTR ERV1 3208 3649 -3957 4 1163 1140 311 58 22 chr15 75792329 75792911 -27702063 + MuRRS4-int LTR ERV1 2515 3117 -1946 4 1163 424 205 109 13 chr15 75793533 75793681 -27701293 - RMER19A LTR ERVK -389 222 1 4 1163 369 172 138 0 chr15 75793712 75793799 -27701175 + B1_Mur1 SINE Alu 51 149 0 4 1163 1452 66 0 5 chr15 75793846 75794493 -27700481 + (CTTG)n Simple_repeat Simple_repeat 1 644 0 4 1163 407 178 0 0 chr15 75794493 75794566 -27700408 - B1_Mur3 SINE Alu -7 142 70 4 1163 550 257 7 21 chr15 75794645 75794788 -27700186 - B1_Mur2 SINE Alu -8 141 1 4 1163 1113 56 7 0 chr15 75794919 75795063 -27699911 + B1_Mus2 SINE Alu 2 146 -1 4 1163 1560 147 16 186 chr15 75795432 75795926 -27699048 - RMER17C LTR ERVK 0 410 1 4 1163 463 261 0 0 chr15 75796480 75796595 -27698379 - PB1D9 SINE Alu -5 115 1 4 1163 1526 193 142 26 chr15 75796601 75797009 -27697965 + RMER6B LTR ERVK 1 455 -6 4 1163 1088 75 0 20 chr15 75797010 75797147 -27697827 + B1_Mm SINE Alu 2 138 -9 4 1163 185 0 40 0 chr15 75797147 75797172 -27697802 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1163 1088 75 0 20 chr15 75797172 75797183 -27697791 + B1_Mm SINE Alu 139 147 0 4 1163 504 165 0 0 chr15 75797268 75797359 -27697615 + T-rich Low_complexity Low_complexity 5 95 0 4 1163 479 131 145 16 chr15 75797362 75797486 -27697488 + RMER1A Other Other 887 1026 -4 4 1163 443 195 11 0 chr15 75799298 75799385 -27695589 + B1_Mus2 SINE Alu 48 135 -12 4 1163 232 287 40 0 chr15 75800290 75800371 -27694603 - PB1D9 SINE Alu -37 113 26 4 1163 1179 22 0 0 chr15 75800417 75800555 -27694419 + B1_Mus1 SINE Alu 1 138 -10 4 1163 338 238 174 33 chr15 75800581 75800764 -27694210 - L1MD LINE L1 -842 5304 5105 4 1163 433 205 178 149 chr15 75800809 75801050 -27693924 + MTE2a LTR MaLR 1 248 -131 4 1163 222 288 14 0 chr15 75801284 75801357 -27693617 - PB1D10 SINE Alu -34 83 10 4 1163 375 267 95 0 chr15 75801430 75801535 -27693439 - RSINE1 SINE B4 -48 117 3 4 1163 1113 94 61 6 chr15 75801542 75801723 -27693251 - B2_Mm2 SINE B2 0 195 5 4 1163 312 291 99 33 chr15 75801740 75801861 -27693113 - L1MD LINE L1 -1015 5131 5003 4 1163 241 287 149 0 chr15 75801884 75801971 -27693003 - B1F2 SINE Alu -37 112 13 4 1163 1107 23 0 0 chr15 75801972 75802103 -27692871 + L1Md_F2 LINE L1 6166 6296 -286 4 1163 1171 35 14 0 chr15 75802162 75802307 -27692667 - B1_Mus2 SINE Alu 0 147 1 4 1163 311 320 52 0 chr15 75802402 75802499 -27692475 + MTE2b LTR MaLR 75 176 -203 4 1163 187 93 47 0 chr15 75802780 75802823 -27692151 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 4 1163 632 183 43 7 chr15 75802830 75802971 -27692003 - B1_Mus1 SINE Alu -2 146 1 4 1163 319 257 263 40 chr15 75803014 75803149 -27691825 - MTEb LTR MaLR -2 377 210 4 1163 1050 59 0 0 chr15 75803149 75803284 -27691690 - B1_Mus1 SINE Alu -13 135 1 4 1163 319 257 263 40 chr15 75803284 75803399 -27691575 - MTEb LTR MaLR -170 209 72 4 1163 329 320 0 0 chr15 75803515 75803643 -27691331 + MurSatRep1 Unknown Unknown 617 744 -1393 4 1163 341 235 102 85 chr15 75804515 75804552 -27690422 - MT2B LTR ERVL -259 342 213 4 1163 885 94 8 0 chr15 75804552 75804680 -27690294 - B1_Mur4 SINE Alu -13 137 9 4 1163 341 235 102 85 chr15 75804680 75804692 -27690282 - MT2B LTR ERVL -259 212 163 4 1163 444 286 61 7 chr15 75806004 75806152 -27688822 + RSINE1 SINE B4 2 157 -8 4 1163 440 179 12 0 chr15 75807014 75807098 -27687876 + B3 SINE B2 1 85 -131 4 1163 347 255 20 10 chr15 75807096 75807195 -27687779 - PB1D10 SINE Alu -13 104 5 4 1163 909 164 77 29 chr15 75807214 75807421 -27687553 - URR1B DNA MER1_type -8 217 1 4 1163 1032 243 96 32 chr15 75807631 75807975 -27686999 - ORR1D2 LTR MaLR 0 370 5 4 1163 541 311 138 27 chr15 75808342 75808603 -27686371 + B4A SINE B4 1 290 -2 4 1163 670 206 176 6 chr15 75808810 75808986 -27685988 + B3 SINE B2 1 206 -10 4 1163 364 243 248 7 chr15 75808994 75809143 -27685831 - B2_Mm2 SINE B2 -9 186 2 4 1163 203 122 0 155 chr15 75809154 75809212 -27685762 + T-rich Low_complexity Low_complexity 1 49 0 4 1163 622 45 11 11 chr15 75809215 75809304 -27685670 + B1_Mus2 SINE Alu 58 146 -1 4 1163 246 115 436 0 chr15 75809301 75809395 -27685579 - B2_Mm2 SINE B2 -14 181 47 4 1163 1123 114 11 11 chr15 75809423 75809601 -27685373 - B2_Mm1t SINE B2 -14 179 2 4 1163 798 154 0 7 chr15 75809602 75809739 -27685235 - B1_Mur4 SINE Alu -13 137 2 4 1163 1267 129 0 0 chr15 75810094 75810287 -27684687 + B2_Mm2 SINE B2 2 194 -1 4 1163 330 258 52 41 chr15 75810288 75810299 -27684675 + B4 SINE B4 81 92 -200 4 1163 478 204 55 9 chr15 75810299 75810408 -27684566 + PB1D9 SINE Alu 2 115 -5 4 1163 194 83 56 0 chr15 75810805 75810841 -27684133 + (CATA)n Simple_repeat Simple_repeat 3 40 0 4 1163 847 136 7 52 chr15 75813282 75813437 -27681537 - B1_Mur3 SINE Alu -1 148 1 4 1163 180 200 0 0 chr15 75813661 75813701 -27681273 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 1163 736 164 7 22 chr15 75814442 75814579 -27680395 + B1_Mus1 SINE Alu 2 136 -12 4 1163 418 212 36 10 chr15 75815131 75815233 -27679741 + PB1D10 SINE Alu 9 115 -5 4 1163 427 313 63 63 chr15 75815191 75815249 -27679725 + B4 SINE B4 26 216 -76 4 1163 770 168 13 65 chr15 75815249 75815382 -27679592 + B1_Mur4 SINE Alu 6 140 -10 4 1163 192 77 0 0 chr15 75815382 75815408 -27679566 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 1163 770 168 13 65 chr15 75815408 75815427 -27679547 + B1_Mur4 SINE Alu 141 150 0 4 1163 1614 129 62 17 chr15 75815475 75815766 -27679208 + ORR1B1 LTR MaLR 91 394 0 4 1163 269 357 0 0 chr15 75815779 75815863 -27679111 + RSINE1 SINE B4 6 89 -76 4 1163 1269 83 39 0 chr15 75816013 75816194 -27678780 + B2_Mm2 SINE B2 2 189 -6 4 1163 290 365 18 36 chr15 75816574 75816739 -27678235 + RMER15 LTR ERVL 354 515 -60 4 1163 23 0 0 0 chr15 75816982 75817005 -27677969 + AT_rich Low_complexity Low_complexity 1 23 0 4 1163 1352 76 16 0 chr15 75817005 75817190 -27677784 + B2_Mm2 SINE B2 1 188 -7 4 1163 239 270 55 22 chr15 75817373 75817464 -27677510 - ORR1D1 LTR MaLR -44 330 237 4 1163 677 197 42 7 chr15 75817512 75817655 -27677319 - B1_Mur1 SINE Alu 0 149 2 4 1163 410 234 35 26 chr15 75817665 75817779 -27677195 - ORR1D1 LTR MaLR -255 119 5 4 1163 207 0 0 0 chr15 75817786 75817809 -27677165 + (TC)n Simple_repeat Simple_repeat 1 23 0 4 1163 222 136 0 0 chr15 75818025 75818069 -27676905 + (A)n Simple_repeat Simple_repeat 1 44 0 4 1163 1066 194 50 93 chr15 75818399 75818555 -27676419 - MTD LTR MaLR -141 278 128 4 1163 1416 50 6 6 chr15 75818555 75818736 -27676238 + B2_Mm2 SINE B2 1 181 -14 4 1163 1066 194 50 93 chr15 75818736 75818857 -27676117 - MTD LTR MaLR -292 127 13 4 1163 297 109 0 0 chr15 75818857 75818912 -27676062 + (A)n Simple_repeat Simple_repeat 1 55 0 4 1163 1636 162 140 43 chr15 75819372 75819765 -27675209 - RMER10A LTR ERVL 0 442 12 4 1163 762 243 18 50 chr15 75819840 75820061 -27674913 + B3 SINE B2 3 216 0 4 1163 333 175 0 0 chr15 75820079 75820136 -27674838 - B1_Mur1 SINE Alu -16 133 77 4 1163 203 250 0 0 chr15 75820291 75820339 -27674635 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1163 517 229 198 25 chr15 75820378 75820575 -27674399 - B4A SINE B4 -16 276 46 4 1163 277 333 30 15 chr15 75820760 75820891 -27674083 - B1_Mus1 SINE Alu 0 148 16 4 1163 214 163 47 0 chr15 75820906 75820949 -27674025 - PB1D10 SINE Alu 0 117 73 4 1163 350 135 164 9 chr15 75821065 75821172 -27673802 - B2_Mm2 SINE B2 -5 188 47 4 1163 1166 98 35 0 chr15 75821219 75821393 -27673581 - B2_Mm2 SINE B2 -14 181 2 4 1163 1317 90 16 0 chr15 75821751 75821940 -27673034 - B2_Mm2 SINE B2 -3 192 1 4 1163 665 122 283 52 chr15 75822350 75822523 -27672451 - B3 SINE B2 -1 215 3 4 1163 180 0 0 0 chr15 75822711 75822731 -27672243 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 4 1163 778 64 9 2 chr15 75822731 75822850 -27672124 - B1_Mus1 SINE Alu -13 135 14 4 1163 1067 69 20 7 chr15 75823014 75823160 -27671814 + B1_Mus1 SINE Alu 1 148 0 4 1163 367 225 0 0 chr15 75823562 75823642 -27671332 - ID4_ SINE ID 0 83 4 4 1163 249 33 0 0 chr15 75825403 75825433 -27669541 + (GGGTG)n Simple_repeat Simple_repeat 4 33 0 4 1163 181 200 0 74 chr15 75827681 75827735 -27667239 + L3 LINE CR1 3518 3567 -922 4 1163 342 248 89 0 chr15 75830700 75830801 -27664173 - B1_Mur1 SINE Alu 0 149 40 4 1163 250 209 320 6 chr15 75836132 75836229 -27658745 - B1F SINE Alu -3 114 1 5 1163 212 240 39 29 chr15 75839871 75839974 -27655000 + (CCCG)n Simple_repeat Simple_repeat 1 104 0 5 1163 948 113 21 7 chr15 75842118 75842261 -27652713 + B1_Mus2 SINE Alu 1 145 -2 5 1163 183 232 0 0 chr15 75843316 75843398 -27651576 + (CTG)n Simple_repeat Simple_repeat 3 84 0 5 1163 333 0 0 0 chr15 75844886 75844923 -27650051 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1163 270 307 0 33 chr15 75845505 75845596 -27649378 + (CATG)n Simple_repeat Simple_repeat 4 91 0 5 1163 1268 99 44 0 chr15 75846640 75846821 -27648153 - B2_Mm2 SINE B2 -6 189 1 5 1163 315 0 0 0 chr15 75847080 75847115 -27647859 + (T)n Simple_repeat Simple_repeat 1 35 0 5 1163 756 185 61 39 chr15 75848161 75848223 -27646751 - MTEb LTR MaLR -1 378 318 5 1163 231 36 0 0 chr15 75848223 75848251 -27646723 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 5 1163 756 185 61 39 chr15 75848251 75848368 -27646606 - MTEb LTR MaLR -62 317 196 5 1163 591 161 17 26 chr15 75848377 75848492 -27646482 + PB1D9 SINE Alu 7 120 0 5 1163 243 316 163 15 chr15 75848492 75848512 -27646462 + B4A SINE B4 92 246 -46 5 1163 720 238 67 10 chr15 75848530 75848725 -27646249 - MTEb LTR MaLR -173 206 1 5 1163 232 308 0 0 chr15 75848787 75848852 -27646122 - MLT1D LTR MaLR -437 68 4 5 1163 320 250 82 7 chr15 75849414 75849536 -27645438 - L1M3 LINE L1 -1861 4285 4141 5 1163 935 181 55 68 chr15 75849602 75849821 -27645153 - B3 SINE B2 0 216 1 5 1163 555 275 34 34 chr15 75849939 75850116 -27644858 - B3A SINE B2 0 198 22 5 1163 726 44 0 0 chr15 75850196 75850286 -27644688 + (TTTA)n Simple_repeat Simple_repeat 4 93 0 5 1163 234 324 108 0 chr15 75850370 75850444 -27644530 - B3A SINE B2 -2 196 115 5 1163 589 292 92 81 chr15 75850827 75851196 -27643778 - Lx8 LINE L1 -16 7457 7085 5 1163 1216 79 28 0 chr15 75851198 75851375 -27643599 + B2_Mm2 SINE B2 13 194 -1 5 1163 2057 268 89 9 chr15 75851375 75852012 -27642962 - Lx8 LINE L1 -395 7078 6391 5 1163 1574 53 32 0 chr15 75852023 75852212 -27642762 - B2_Mm2 SINE B2 0 195 1 5 1163 21 36 0 0 chr15 75852219 75852247 -27642727 + AT_rich Low_complexity Low_complexity 1 28 0 5 1163 573 115 0 0 chr15 75852294 75852381 -27642593 + (TTCC)n Simple_repeat Simple_repeat 3 89 0 5 1163 925 136 0 0 chr15 75852381 75852521 -27642453 - B1_Mus2 SINE Alu 0 147 8 5 1163 385 19 37 0 chr15 75852573 75852627 -27642347 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1163 672 230 7 47 chr15 75852642 75852793 -27642181 - RSINE1 SINE B4 -22 143 1 5 1163 410 89 0 0 chr15 75852842 75852898 -27642076 + MTB_Mm LTR MaLR 297 352 -55 5 1163 704 170 22 7 chr15 75852906 75853042 -27641932 + ORR1B2 LTR MaLR 13 150 -217 5 1163 563 265 104 31 chr15 75853042 75853264 -27641710 + RMER17C-int LTR ERVK 2648 2885 -353 5 1163 314 141 3 76 chr15 75853278 75853359 -27641615 + ORR1B2 LTR MaLR 253 394 0 5 1163 870 300 101 113 chr15 75853849 75854083 -27640891 - RLTR42-int LTR ERVK -2287 3850 3625 5 1163 1268 41 0 0 chr15 75854083 75854229 -27640745 + B1_Mus2 SINE Alu 2 147 0 5 1163 870 300 101 113 chr15 75854229 75854850 -27640124 - RLTR42-int LTR ERVK -2513 3624 2981 5 1163 1152 103 52 0 chr15 75854850 75854998 -27639976 + B2_Mm2 SINE B2 1 157 -38 5 1163 230 0 0 32 chr15 75854998 75855029 -27639945 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 5 1163 1152 103 52 0 chr15 75855029 75855054 -27639920 + B2_Mm2 SINE B2 158 182 -13 5 1163 870 300 101 113 chr15 75855054 75855386 -27639588 - RLTR42-int LTR ERVK -3157 2980 2659 5 1163 402 21 0 0 chr15 75855386 75855433 -27639541 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1163 306 0 0 0 chr15 75855433 75855466 -27639508 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 1163 870 300 101 113 chr15 75855466 75855813 -27639161 - RLTR42-int LTR ERVK -3479 2658 2333 5 1163 1043 156 86 21 chr15 75855800 75856043 -27638931 - RLTR42-int LTR ERVK -3395 2127 1869 5 1163 499 270 134 26 chr15 75856411 75856605 -27638369 - RLTR42-int LTR ERVK -3727 1795 1581 5 1163 1420 8 11 28 chr15 75856646 75857591 -27637383 + (GAA)n Simple_repeat Simple_repeat 1 928 0 5 1163 318 261 22 125 chr15 75857595 75857731 -27637243 + MT2B LTR ERVL 143 264 -337 5 1163 727 175 0 28 chr15 75857627 75857768 -27637206 + B1_Mus1 SINE Alu 10 146 -2 5 1163 275 0 29 0 chr15 75857840 75857875 -27637099 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 5 1163 1189 318 74 81 chr15 75858042 75858294 -27636680 + Lx8 LINE L1 5081 5324 -556 5 1163 417 81 0 0 chr15 75858294 75858356 -27636618 + (CA)n Simple_repeat Simple_repeat 2 63 0 5 1163 2439 312 75 81 chr15 75858356 75858930 -27636044 + Lx8 LINE L1 5325 5899 -1574 5 1163 930 170 146 16 chr15 75858930 75859115 -27635859 - B3 SINE B2 -7 209 1 5 1163 2439 306 77 80 chr15 75859115 75859161 -27635813 + Lx8 LINE L1 5900 5936 -1537 5 1163 1419 71 28 0 chr15 75859161 75859343 -27635631 - B2_Mm1a SINE B2 -6 187 1 5 1163 2439 306 77 80 chr15 75859343 75859582 -27635392 + Lx8 LINE L1 5937 6177 -1296 5 1163 279 0 0 0 chr15 75859582 75859613 -27635361 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1163 2439 306 77 80 chr15 75859613 75859633 -27635341 + Lx8 LINE L1 6178 6191 -1282 5 1163 742 149 168 36 chr15 75859633 75859800 -27635174 + B2_Mm2 SINE B2 5 193 -2 5 1163 2439 306 77 80 chr15 75859800 75859829 -27635145 + Lx8 LINE L1 6192 6195 -1278 5 1163 675 67 0 0 chr15 75859829 75859918 -27635056 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 5 1163 2439 306 77 80 chr15 75859918 75860122 -27634852 + Lx8 LINE L1 6196 6398 -1075 5 1163 1532 59 32 0 chr15 75860122 75860308 -27634666 + B2_Mm2 SINE B2 2 193 -2 5 1163 2439 306 77 80 chr15 75860308 75860740 -27634234 + Lx8 LINE L1 6399 6842 -631 5 1163 1774 172 58 84 chr15 75860740 75860835 -27634139 - ORR1C2 LTR MaLR 0 384 320 5 1163 1426 60 0 21 chr15 75860835 75861022 -27633952 + B2_Mm2 SINE B2 5 187 -8 5 1163 1774 172 58 84 chr15 75861022 75861320 -27633654 - ORR1C2 LTR MaLR -65 319 1 5 1163 2439 306 77 80 chr15 75861320 75861509 -27633465 + Lx8 LINE L1 6843 7051 -422 5 1163 768 132 6 153 chr15 75861900 75862070 -27632904 + B1_Mur4 SINE Alu 1 145 -5 5 1163 653 130 23 61 chr15 75862241 75862372 -27632602 - B1_Mur1 SINE Alu -1 148 23 5 1163 1160 78 0 0 chr15 75862560 75862701 -27632273 - B1_Mus2 SINE Alu -6 141 1 5 1163 307 275 12 0 chr15 75862907 75862987 -27631987 + B4 SINE B4 1 81 -211 5 1163 336 260 9 103 chr15 75863105 75863221 -27631753 - PB1 SINE Alu -9 118 14 5 1163 234 0 0 0 chr15 75863244 75863270 -27631704 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1163 216 167 0 0 chr15 75863367 75863415 -27631559 + C-rich Low_complexity Low_complexity 1 48 0 5 1163 279 122 0 0 chr15 75863759 75863808 -27631166 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1163 332 265 31 0 chr15 75864342 75864440 -27630534 - PB1 SINE Alu -9 118 18 5 1163 21 36 0 0 chr15 75865064 75865092 -27629882 + GC_rich Low_complexity Low_complexity 1 28 0 5 1163 321 169 174 31 chr15 75865558 75865656 -27629318 + PB1D7 SINE Alu 9 120 0 5 1163 432 0 0 0 chr15 75866079 75866127 -27628847 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1163 298 299 0 11 chr15 75866131 75866219 -27628755 - B1F1 SINE Alu -60 89 3 5 1163 380 337 130 0 chr15 75866634 75866880 -27628094 + L1MD1 LINE L1 4888 5165 -981 5 1163 709 221 44 6 chr15 75866888 75867047 -27627927 + U1 snRNA snRNA 1 165 0 5 1163 673 157 15 0 chr15 75867052 75867186 -27627788 + GA-rich Low_complexity Low_complexity 1 136 0 5 1163 400 312 195 21 chr15 75867489 75867924 -27627050 + L1MD1 LINE L1 5491 6001 -241 5 1163 297 109 0 0 chr15 75868704 75868750 -27626224 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 5 1163 1396 249 35 17 chr15 75869195 75869542 -27625432 - ORR1E LTR MaLR -6 353 1 5 1163 481 261 8 30 chr15 75869542 75869662 -27625312 - MTE-int LTR MaLR -53 1527 1411 5 1163 860 109 7 42 chr15 75870172 75870315 -27624659 - B1_Mus2 SINE Alu 0 147 10 5 1163 405 254 0 91 chr15 75870213 75870334 -27624640 - MT2B LTR ERVL -337 264 155 5 1163 1238 121 28 0 chr15 75870480 75870662 -27624312 - B2_Mm2 SINE B2 -7 188 2 5 1163 1688 259 47 64 chr15 75870906 75871422 -27623552 - MTE-int LTR MaLR -149 1431 925 5 1163 314 236 8 120 chr15 75871538 75871663 -27623311 + MT2B LTR ERVL 154 264 -337 5 1163 733 203 0 14 chr15 75871559 75871699 -27623275 + B1_Mur2 SINE Alu 11 148 -1 5 1163 1151 44 40 0 chr15 75871706 75871934 -27623040 + (TAGA)n Simple_repeat Simple_repeat 1 237 0 5 1163 549 216 43 8 chr15 75872229 75872346 -27622628 + RSINE1 SINE B4 3 123 -42 5 1163 414 0 0 0 chr15 75872348 75872394 -27622580 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1163 688 224 30 0 chr15 75872428 75872562 -27622412 + B1F1 SINE Alu 10 147 -2 5 1163 243 61 0 0 chr15 75872588 75872621 -27622353 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 5 1163 455 111 0 182 chr15 75872626 75872736 -27622238 + B2_Mm2 SINE B2 2 91 -104 5 1163 344 186 0 57 chr15 75872809 75872900 -27622074 + ORR1E LTR MaLR 1 81 -297 5 1163 648 199 51 14 chr15 75873083 75873221 -27621753 + B1_Mur4 SINE Alu 6 148 -2 5 1163 814 207 6 29 chr15 75873243 75873417 -27621557 + ID_B1 SINE B4 2 171 -53 5 1163 363 121 0 0 chr15 75873422 75873480 -27621494 + (TC)n Simple_repeat Simple_repeat 2 59 0 5 1163 378 0 0 0 chr15 75873480 75873522 -27621452 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1163 927 206 74 20 chr15 75873534 75873737 -27621237 + B3 SINE B2 1 214 -2 5 1163 1839 189 147 2 chr15 75873743 75874200 -27620774 + Lx9 LINE L1 7096 7618 -26 5 1163 318 312 42 35 chr15 75874964 75875107 -27619867 - LTR55 LTR ERV -327 221 78 5 1163 182 323 15 15 chr15 75875163 75875229 -27619745 - MIRm SINE MIR -55 221 156 5 1163 299 130 19 0 chr15 75880039 75880093 -27614881 + (GGA)n Simple_repeat Simple_repeat 1 55 0 5 1163 213 309 12 24 chr15 75881540 75881623 -27613351 + ID4_ SINE ID 2 83 0 5 1163 277 359 74 0 chr15 75883613 75883764 -27611210 + L1MC4 LINE L1 6707 6868 -1174 5 1163 640 280 80 5 chr15 75883850 75884051 -27610923 + B3 SINE B2 1 216 0 5 1163 340 250 65 0 chr15 75884854 75884946 -27610028 + RSINE1 SINE B4 24 121 -44 5 1163 902 168 0 14 chr15 75885098 75885243 -27609731 + B1_Mur4 SINE Alu 2 144 -6 5 1163 1786 175 111 11 chr15 75885366 75885725 -27609249 + Lx5 LINE L1 6652 7046 -4 5 1163 252 154 0 0 chr15 75885755 75885807 -27609167 + GA-rich Low_complexity Low_complexity 4 55 0 5 1163 733 189 6 92 chr15 75885816 75885979 -27608995 + B1_Mur2 SINE Alu 1 149 0 5 1163 1033 292 98 26 chr15 75888843 75889272 -27605702 + Lx6 LINE L1 6975 7434 -26 5 1163 180 0 0 0 chr15 75890310 75890330 -27604644 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 1164 214 344 0 88 chr15 75890701 75890803 -27604171 - ID4 SINE ID -51 101 9 5 1164 246 136 0 0 chr15 75893163 75893207 -27601767 + (TCC)n Simple_repeat Simple_repeat 2 45 0 6 1164 190 309 0 147 chr15 75898188 75898317 -27596657 - L2 LINE L2 -3061 358 249 6 1164 512 163 167 24 chr15 75898781 75898907 -27596067 + B1_Mus1 SINE Alu 5 148 0 6 1164 28 95 0 0 chr15 75899855 75899939 -27595035 + GC_rich Low_complexity Low_complexity 1 84 0 6 1164 1242 41 7 0 chr15 75902491 75902638 -27592336 - B1_Mus1 SINE Alu 0 148 1 6 1164 189 195 0 0 chr15 75908055 75908096 -27586878 + (CCG)n Simple_repeat Simple_repeat 3 43 0 6 1164 312 27 0 0 chr15 75909938 75909975 -27584999 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 1164 22 0 0 0 chr15 75912161 75912183 -27582791 + AT_rich Low_complexity Low_complexity 1 22 0 6 1164 937 76 68 8 chr15 75912468 75912601 -27582373 + B1_Mus1 SINE Alu 2 142 -6 6 1164 742 184 13 52 chr15 75912672 75912827 -27582147 + B1F2 SINE Alu 1 149 0 6 1164 351 0 0 0 chr15 75912933 75912972 -27582002 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1164 456 196 0 130 chr15 75913228 75913351 -27581623 + B1_Mur2 SINE Alu 43 149 0 6 1164 263 231 0 0 chr15 75913369 75913421 -27581553 - B1_Mus2 SINE Alu -61 86 35 6 1164 258 49 24 0 chr15 75913437 75913478 -27581496 + Lx5 LINE L1 6518 6559 -491 6 1164 1157 245 130 0 chr15 75913531 75913854 -27581120 + Lx6 LINE L1 7096 7460 0 6 1164 303 286 196 29 chr15 75914100 75914309 -27580665 + HAL1 LINE L1 1452 1695 -812 6 1164 478 275 25 86 chr15 75914537 75914700 -27580274 + RSINE1 SINE B4 1 153 -12 6 1164 351 0 0 0 chr15 75914708 75914747 -27580227 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1164 346 234 52 0 chr15 75914755 75914832 -27580142 + HAL1 LINE L1 2020 2100 -407 6 1164 269 233 261 22 chr15 75915000 75915078 -27579896 + B1_Mur1 SINE Alu 5 106 -43 6 1164 2820 102 296 9 chr15 75915078 75915545 -27579429 + MT2B LTR ERVL 1 601 0 6 1164 269 273 88 64 chr15 75915545 75915586 -27579388 + B1_Mur1 SINE Alu 78 118 -31 6 1164 238 278 124 0 chr15 75915657 75915754 -27579220 + PB1D7 SINE Alu 6 114 -6 6 1164 772 137 62 35 chr15 75915756 75915900 -27579074 + B1_Mus1 SINE Alu 1 148 0 6 1164 23 0 0 0 chr15 75915900 75915923 -27579051 + AT_rich Low_complexity Low_complexity 1 23 0 6 1164 769 320 77 138 chr15 75916120 75916572 -27578402 + MLT1E3 LTR MaLR 52 499 -125 6 1164 279 0 0 0 chr15 75916572 75916603 -27578371 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1164 532 319 72 148 chr15 75916603 75916656 -27578318 + MLT1E3 LTR MaLR 449 500 -5 6 1164 268 321 37 37 chr15 75916769 75916905 -27578069 - L2 LINE L2 -2560 859 724 6 1164 220 278 29 43 chr15 75921850 75921989 -27572985 + C-rich Low_complexity Low_complexity 4 140 0 6 1164 353 372 98 33 chr15 75922976 75923190 -27571784 + MER77 LTR ERVL 10 237 -370 6 1164 818 183 33 49 chr15 75923236 75923420 -27571554 + B3A SINE B2 12 192 -6 6 1164 297 350 92 37 chr15 75923605 75923899 -27571075 + L2b LINE L2 2986 3295 -80 6 1164 283 269 129 65 chr15 75924687 75924826 -27570148 + MLT1F2 LTR MaLR 214 361 -199 6 1164 910 151 0 27 chr15 75925473 75925623 -27569351 + B1_Mur4 SINE Alu 5 150 0 6 1164 391 311 145 16 chr15 75925639 75925832 -27569142 - MLT1B LTR MaLR -9 381 164 6 1164 550 196 137 40 chr15 75925859 75926032 -27568942 - B3 SINE B2 -6 210 21 6 1164 1980 85 44 10 chr15 75926032 75926330 -27568644 + ORR1A4 LTR MaLR 1 308 -21 6 1164 410 258 0 21 chr15 75926388 75926483 -27568491 + PB1D10 SINE Alu 3 95 -22 6 1164 1093 64 35 0 chr15 75926562 75926703 -27568271 - B1_Mus1 SINE Alu -1 147 2 6 1164 1180 99 41 0 chr15 75926732 75926904 -27568070 + B2_Mm1t SINE B2 1 179 -14 6 1164 226 281 95 54 chr15 75928108 75928255 -27566719 + RLTR40 LTR ERVK 478 630 -187 6 1164 324 289 115 0 chr15 75928270 75928374 -27566600 - PB1D7 SINE Alu -2 118 3 6 1164 423 132 0 0 chr15 75928614 75928682 -27566292 + (GAAAA)n Simple_repeat Simple_repeat 2 69 0 6 1164 1004 116 178 41 chr15 75929556 75929753 -27565221 + URR1A DNA MER1_type 3 226 0 6 1164 413 353 85 46 chr15 75930000 75930434 -27564540 + L1MEf LINE L1 341 791 -5409 6 1164 380 300 48 30 chr15 75930618 75930783 -27564191 + L1MEf LINE L1 1108 1275 -4925 6 1164 830 164 132 41 chr15 75931098 75931295 -27563679 + B3 SINE B2 1 215 -1 6 1164 26 0 0 0 chr15 75931301 75931327 -27563647 + AT_rich Low_complexity Low_complexity 1 26 0 6 1164 724 284 39 15 chr15 75931355 75931559 -27563415 - B3 SINE B2 -7 209 1 6 1164 280 348 48 41 chr15 75932115 75932247 -27562727 + B1F SINE Alu 2 138 -11 6 1164 704 218 13 13 chr15 75932247 75932396 -27562578 + B1_Mur4 SINE Alu 2 150 0 6 1164 280 348 48 41 chr15 75932396 75932410 -27562564 + B1F SINE Alu 139 149 0 6 1164 206 103 0 49 chr15 75932410 75932451 -27562523 + A-rich Low_complexity Low_complexity 3 41 0 6 1164 820 122 7 21 chr15 75943344 75943486 -27551488 + B1_Mur3 SINE Alu 10 149 0 6 1164 236 188 0 0 chr15 75943486 75943534 -27551440 + A-rich Low_complexity Low_complexity 5 52 0 6 1164 952 83 62 0 chr15 75943546 75943691 -27551283 - B2_Mm2 SINE B2 -41 154 1 6 1164 315 0 0 0 chr15 75943762 75943797 -27551177 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1164 207 0 0 0 chr15 75943967 75943990 -27550984 + (TA)n Simple_repeat Simple_repeat 1 23 0 6 1164 340 308 68 0 chr15 75945012 75945158 -27549816 + MLT1C LTR MaLR 6 161 -306 6 1164 540 0 0 0 chr15 75945504 75945564 -27549410 + (TC)n Simple_repeat Simple_repeat 1 60 0 6 1164 563 112 194 65 chr15 75945565 75945689 -27549285 - B1_Mur4 SINE Alu -2 148 9 6 1164 310 224 139 113 chr15 75945569 75945720 -27549254 - ID_B1 SINE B4 -6 218 64 6 1164 189 0 0 0 chr15 75947719 75947740 -27547234 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 6 1164 255 61 0 0 chr15 75949797 75949830 -27545144 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 6 1164 591 48 0 12 chr15 75949991 75950076 -27544898 + B1_Mus1 SINE Alu 2 85 -63 6 1164 376 171 0 89 chr15 75950002 75950092 -27544882 + MT2B LTR ERVL 175 256 -345 6 1164 348 216 18 81 chr15 75950092 75950111 -27544863 + B4A SINE B4 96 197 -95 6 1164 944 161 271 4 chr15 75952596 75952821 -27542153 + Lx5 LINE L1 6766 7050 0 6 1164 448 297 172 39 chr15 75952847 75953050 -27541924 + B4A SINE B4 1 230 -62 6 1164 810 255 5 25 chr15 75953050 75953251 -27541723 + B3A SINE B2 2 198 0 6 1164 30 59 0 0 chr15 75953251 75953302 -27541672 + AT_rich Low_complexity Low_complexity 1 51 0 6 1164 353 235 24 12 chr15 75953302 75953384 -27541590 + L1MCa LINE L1 1890 1972 -4536 6 1164 216 111 0 0 chr15 75953440 75953476 -27541498 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1164 336 48 0 0 chr15 75957117 75957159 -27537815 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1164 4483 104 69 4 chr15 75958933 75959625 -27535349 + RMER19A LTR ERVK 1 737 0 6 1164 200 59 29 0 chr15 75960247 75960281 -27534693 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1164 882 36 0 0 chr15 75960281 75960393 -27534581 - B1_Mm SINE Alu -9 138 27 6 1164 1791 185 68 6 chr15 75960396 75960750 -27534224 + ORR1C2 LTR MaLR 9 384 0 6 1164 216 244 0 0 chr15 75960931 75960972 -27534002 + polypurine Low_complexity Low_complexity 1 41 0 6 1164 255 364 63 47 chr15 75961173 75961536 -27533438 + MLT1B LTR MaLR 9 377 -13 6 1164 2801 214 72 85 chr15 75961679 75962548 -27532426 - RMER13A LTR ERVK -1 859 2 6 1164 279 71 0 0 chr15 75962958 75963000 -27531974 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1164 456 19 0 0 chr15 75963000 75963052 -27531922 + (GA)n Simple_repeat Simple_repeat 1 53 0 6 1164 737 265 0 12 chr15 75963081 75963245 -27531729 + B4A SINE B4 112 273 -19 6 1164 699 12 0 0 chr15 75963313 75963393 -27531581 + (GAA)n Simple_repeat Simple_repeat 1 80 0 6 1164 659 199 0 29 chr15 75963394 75963534 -27531440 + B1_Mur1 SINE Alu 9 144 -5 6 1164 1040 141 85 0 chr15 75963541 75963740 -27531234 + B3 SINE B2 1 216 0 6 1164 32 57 0 0 chr15 75963751 75963804 -27531170 + AT_rich Low_complexity Low_complexity 1 53 0 6 1164 273 312 26 9 chr15 75964152 75964265 -27530709 + PB1D10 SINE Alu 3 117 0 6 1164 424 330 46 109 chr15 75964297 75964535 -27530439 + ID_B1 SINE B4 2 224 0 6 1164 209 149 43 0 chr15 75964535 75964582 -27530392 + (CAAA)n Simple_repeat Simple_repeat 1 49 0 6 1164 421 263 134 33 chr15 75967063 75967250 -27527724 - MLT1C LTR MaLR -5 500 278 6 1164 291 114 0 0 chr15 75967406 75967450 -27527524 + (CAGA)n Simple_repeat Simple_repeat 3 46 0 6 1164 422 259 299 43 chr15 75968183 75968528 -27526446 + MLT1C LTR MaLR 5 437 -30 6 1164 214 288 152 0 chr15 75969863 75969929 -27525045 + RSINE1 SINE B4 1 76 -89 6 1164 669 210 4 22 chr15 75969949 75970224 -27524750 + (CATA)n Simple_repeat Simple_repeat 1 269 0 6 1164 749 150 79 0 chr15 75971178 75971305 -27523669 - B1_Mus1 SINE Alu -10 138 2 6 1164 800 144 236 0 chr15 75971327 75971501 -27523473 - B3 SINE B2 0 216 2 6 1164 432 0 0 0 chr15 75971634 75971682 -27523292 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 1164 297 212 162 0 chr15 75971945 75972025 -27522949 - ID_B1 SINE B4 -131 93 1 6 1164 698 187 0 16 chr15 75972049 75972174 -27522800 - B3 SINE B2 -93 123 1 6 1164 549 273 0 40 chr15 75972237 75972386 -27522588 + B1_Mur1 SINE Alu 2 144 -5 6 1164 473 296 53 70 chr15 75972413 75972584 -27522390 + B4A SINE B4 2 169 -123 6 1164 204 40 0 0 chr15 75972692 75972717 -27522257 + (CAGAGA)n Simple_repeat Simple_repeat 4 28 0 6 1164 520 146 127 0 chr15 75973388 75973498 -27521476 + B1_Mur1 SINE Alu 18 141 -8 7 1164 396 0 0 0 chr15 75973504 75973548 -27521426 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1164 843 172 0 27 chr15 75974029 75974178 -27520796 + B1_Mur2 SINE Alu 5 149 0 7 1164 405 0 0 0 chr15 75974309 75974354 -27520620 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 1164 571 178 9 61 chr15 75974611 75974725 -27520249 - B3 SINE B2 -104 112 5 7 1164 260 301 13 78 chr15 75974689 75974721 -27520253 + B4 SINE B4 88 139 -153 6 1164 277 50 0 0 chr15 75974721 75974761 -27520213 + B1_Mm SINE Alu 108 147 0 7 1164 260 301 13 78 chr15 75974761 75974843 -27520131 + B4 SINE B4 140 278 -14 6 1164 339 25 0 0 chr15 75974852 75974892 -27520082 + (TAG)n Simple_repeat Simple_repeat 2 41 0 7 1164 773 160 0 0 chr15 75974892 75975017 -27519957 - B1_Mus1 SINE Alu -23 125 1 7 1164 204 247 0 0 chr15 75975459 75975544 -27519430 + (CA)n Simple_repeat Simple_repeat 1 85 0 7 1164 369 284 94 47 chr15 75975569 75975739 -27519235 + B3 SINE B2 38 215 -1 7 1164 991 262 0 0 chr15 75975761 75975975 -27518999 + B3 SINE B2 1 214 -2 7 1164 509 365 11 0 chr15 75976216 75976397 -27518577 - MER44D DNA MER2_type -514 191 9 7 1164 1187 143 59 0 chr15 75976426 75976629 -27518345 - B3 SINE B2 -1 215 1 7 1164 611 191 7 64 chr15 75977162 75977302 -27517672 - L1MB7 LINE L1 -31 6153 6022 7 1164 276 194 94 0 chr15 75977302 75977387 -27517587 - PB1D10 SINE Alu -2 125 27 7 1164 200 196 0 0 chr15 75977433 75977479 -27517495 + (TTGG)n Simple_repeat Simple_repeat 1 46 0 7 1164 415 267 52 144 chr15 75977480 75977633 -27517341 - ID_B1 SINE B4 -5 219 81 7 1164 455 159 41 27 chr15 75977636 75977857 -27517117 + (TG)n Simple_repeat Simple_repeat 1 224 0 7 1164 664 130 25 6 chr15 75977875 75978037 -27516937 + (TG)n Simple_repeat Simple_repeat 2 166 0 7 1164 268 246 31 0 chr15 75978042 75978107 -27516867 - ID4 SINE ID -15 68 2 7 1164 255 288 53 44 chr15 75978122 75978347 -27516627 - L1M4c LINE L1 -4180 2204 1978 7 1164 289 239 28 0 chr15 75978471 75978542 -27516432 + ID_B1 SINE B4 131 203 -21 7 1164 265 278 63 19 chr15 75978562 75978664 -27516310 + B4 SINE B4 1 104 -61 7 1164 1146 68 0 0 chr15 75978667 75978815 -27516159 + B1_Mus1 SINE Alu 1 148 0 7 1164 398 20 20 0 chr15 75978922 75978973 -27516001 + (TAG)n Simple_repeat Simple_repeat 2 53 0 7 1164 753 176 0 0 chr15 75978973 75979098 -27515876 - B1_Mus1 SINE Alu -23 125 1 7 1164 1438 49 22 0 chr15 75979108 75979293 -27515681 - B2_Mm2 SINE B2 -6 189 1 7 1164 688 188 0 55 chr15 75979346 75979492 -27515482 - B1_Mur1 SINE Alu -5 144 7 7 1164 612 220 102 53 chr15 75979575 75979762 -27515212 - B3A SINE B2 0 198 3 7 1164 246 305 0 0 chr15 75979821 75979903 -27515071 - L1M4c LINE L1 -4551 1912 1831 7 1164 801 46 0 0 chr15 75979919 75980027 -27514947 - B1_Mm SINE Alu 0 147 40 7 1164 302 182 0 43 chr15 75979977 75980046 -27514928 - 4.5SRNA scRNA scRNA -8 86 21 7 1164 869 154 6 24 chr15 75980048 75980214 -27514760 - MTC LTR MaLR -174 247 85 7 1164 484 132 93 19 chr15 75980227 75980335 -27514639 - B1_Mur3 SINE Alu 0 149 34 7 1164 351 308 73 73 chr15 75980363 75980678 -27514296 - L1M4c LINE L1 -4701 1683 1369 7 1164 443 162 289 26 chr15 75981458 75981572 -27513402 - B1_Mus2 SINE Alu -1 146 3 7 1164 1559 197 5 158 chr15 75982073 75982496 -27512478 - MTC LTR MaLR -59 362 5 7 1164 368 310 115 33 chr15 75982618 75982888 -27512086 - B4A SINE B4 0 292 1 7 1164 1199 107 26 16 chr15 75983358 75983548 -27511426 + B2_Mm2 SINE B2 2 193 -2 7 1164 840 245 136 102 chr15 75983553 75983848 -27511126 - MTE2a LTR MaLR -55 324 20 7 1164 246 342 134 10 chr15 75983827 75984028 -27510946 - MLT1I LTR MaLR -18 393 168 7 1164 2539 85 77 0 chr15 75984178 75984544 -27510430 - ORR1B1 LTR MaLR 0 394 1 7 1164 234 81 0 0 chr15 75984688 75984725 -27510249 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 7 1164 938 81 15 0 chr15 75985075 75985211 -27509763 + (TTTCC)n Simple_repeat Simple_repeat 3 140 0 7 1164 914 215 14 18 chr15 75985270 75985488 -27509486 + URR1B DNA MER1_type 5 221 -4 7 1164 867 215 62 10 chr15 75985853 75986046 -27508928 + B3 SINE B2 11 213 -3 7 1164 536 160 100 0 chr15 75986091 75986191 -27508783 + PB1D9 SINE Alu 5 114 -6 7 1164 462 283 39 8 chr15 75987347 75987475 -27507499 + ID_B1 SINE B4 93 224 0 7 1164 376 252 37 128 chr15 75987708 75987727 -27507247 + B4 SINE B4 75 78 -214 7 1164 753 163 27 41 chr15 75987727 75987874 -27507100 + B1_Mur2 SINE Alu 2 146 -3 7 1164 1163 42 7 0 chr15 75988106 75988250 -27506724 - B1_Mus2 SINE Alu -1 146 2 7 1164 550 159 70 9 chr15 75989608 75989722 -27505252 + B3 SINE B2 1 121 -95 7 1164 193 57 0 54 chr15 75989778 75989815 -27505159 + (TAA)n Simple_repeat Simple_repeat 2 36 0 7 1164 1193 48 0 0 chr15 75989877 75990024 -27504950 + B1_Mus2 SINE Alu 1 147 0 7 1164 183 42 0 0 chr15 75990037 75990061 -27504913 + (CAA)n Simple_repeat Simple_repeat 1 24 0 7 1164 677 219 109 26 chr15 75990226 75990291 -27504683 - ID_B1 SINE B4 -16 208 135 7 1164 932 26 0 9 chr15 75990291 75990407 -27504567 + (TTTTC)n Simple_repeat Simple_repeat 5 119 0 7 1164 677 219 109 26 chr15 75990407 75990533 -27504441 - ID_B1 SINE B4 -90 134 2 7 1164 248 93 47 0 chr15 75990538 75990581 -27504393 + (TTTC)n Simple_repeat Simple_repeat 3 47 0 7 1164 603 158 78 9 chr15 75990592 75990707 -27504267 - B1_Mur2 SINE Alu -8 141 19 7 1164 316 272 70 31 chr15 75990707 75990721 -27504253 - ID_B1 SINE B4 -8 216 83 7 1164 203 176 0 38 chr15 75990736 75990789 -27504185 + CT-rich Low_complexity Low_complexity 1 51 0 7 1164 662 187 57 7 chr15 75990834 75990974 -27504000 - B1_Mus2 SINE Alu 0 147 1 7 1164 440 266 0 9 chr15 75991185 75991295 -27503679 - PB1D10 SINE Alu -6 111 3 7 1164 1002 115 0 13 chr15 75991317 75991467 -27503507 + B1_Mur4 SINE Alu 1 148 -2 7 1164 535 287 53 7 chr15 75991499 75991650 -27503324 - RSINE1 SINE B4 -5 160 3 7 1164 843 187 130 16 chr15 75991769 75991954 -27503020 + B3 SINE B2 1 206 -10 7 1164 21 36 0 0 chr15 75991972 75992000 -27502974 + AT_rich Low_complexity Low_complexity 1 28 0 7 1164 853 162 42 0 chr15 75992009 75992151 -27502823 + B1_Mur1 SINE Alu 2 149 0 7 1164 342 0 0 0 chr15 75992412 75992450 -27502524 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 7 1164 292 159 0 48 chr15 75992853 75992927 -27502047 - PB1D9 SINE Alu -7 113 46 7 1164 189 94 0 0 chr15 75993811 75993843 -27501131 + (T)n Simple_repeat Simple_repeat 1 32 0 7 1164 694 283 37 9 chr15 75993843 75994057 -27500917 - B4 SINE B4 -69 223 4 7 1164 438 293 86 24 chr15 75994144 75994399 -27500575 - L1M5 LINE L1 -887 5259 4989 7 1164 1056 83 21 0 chr15 75994432 75994576 -27500398 + B1_Mus2 SINE Alu 1 147 0 7 1164 302 194 0 14 chr15 75994588 75994661 -27500313 + CT-rich Low_complexity Low_complexity 2 73 0 7 1164 266 262 48 0 chr15 75994835 75994919 -27500055 - L1M5 LINE L1 -1426 4720 4633 7 1164 3212 45 5 0 chr15 75995082 75995480 -27499494 - MTB LTR MaLR 0 400 1 7 1164 446 277 62 15 chr15 75995584 75995828 -27499146 - L1M5 LINE L1 -3090 3056 2808 7 1164 369 0 0 0 chr15 75995828 75995869 -27499105 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 7 1164 709 120 0 0 chr15 75995877 75995985 -27498989 - B1_Mur4 SINE Alu 0 150 43 7 1164 225 237 68 0 chr15 75996077 75996136 -27498838 - ID_B1 SINE B4 -77 147 85 7 1164 268 236 18 0 chr15 75996083 75996138 -27498836 - B1F SINE Alu -92 57 2 7 1164 795 167 22 7 chr15 75996146 75996285 -27498689 - B1_Mur1 SINE Alu -7 142 2 7 1164 285 29 0 0 chr15 75996336 75996370 -27498604 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1164 506 287 93 37 chr15 75996373 75996619 -27498355 - B4A SINE B4 -29 263 4 7 1164 2128 254 171 34 chr15 75996784 75997231 -27497743 + Lx6 LINE L1 6652 7208 -252 7 1164 3164 49 0 17 chr15 75997231 75997645 -27497329 - MTB_Mm LTR MaLR 0 407 1 7 1164 2128 254 171 34 chr15 75997645 75997901 -27497073 + Lx6 LINE L1 7209 7451 -9 7 1164 34 42 0 0 chr15 75997916 75997964 -27497010 + AT_rich Low_complexity Low_complexity 1 48 0 7 1164 283 268 102 33 chr15 75997964 75998109 -27496865 - B1_Mus1 SINE Alu 0 149 5 7 1164 212 300 52 62 chr15 75998260 75998356 -27496618 - B1_Mur2 SINE Alu -54 95 1 7 1164 458 292 39 7 chr15 75998356 75998427 -27496547 - B4A SINE B4 -202 90 15 7 1164 488 301 7 29 chr15 75998504 75998644 -27496330 - ID_B1 SINE B4 -11 213 77 7 1164 276 221 21 85 chr15 75998895 75998989 -27495985 - RSINE1 SINE B4 0 165 78 7 1164 195 129 0 0 chr15 76002500 76002531 -27492443 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1164 217 301 0 0 chr15 76008442 76008535 -27486439 + (CTG)n Simple_repeat Simple_repeat 2 94 0 2 1164 186 43 0 0 chr15 76008620 76008643 -27486331 + (CTG)n Simple_repeat Simple_repeat 2 24 0 3 1164 224 128 0 60 chr15 76013275 76013325 -27481649 + (CCCCAA)n Simple_repeat Simple_repeat 1 47 0 4 1164 545 42 0 14 chr15 76015263 76015336 -27479638 + (TCCC)n Simple_repeat Simple_repeat 1 72 0 5 1164 240 262 143 17 chr15 76015477 76015652 -27479322 + L2 LINE L2 2577 2773 -646 6 1165 535 200 118 44 chr15 76022124 76022260 -27472714 - B1_Mur1 SINE Alu -2 147 2 7 1165 474 33 0 0 chr15 76024691 76024751 -27470223 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 8 1165 208 274 20 31 chr15 76026686 76026784 -27468190 + (CAGCC)n Simple_repeat Simple_repeat 1 97 0 9 1165 231 133 22 0 chr15 76028060 76028105 -27466869 + CT-rich Low_complexity Low_complexity 2 47 0 1 1165 207 224 0 39 chr15 76032685 76032736 -27462238 + G-rich Low_complexity Low_complexity 4 52 0 1 1165 234 338 12 0 chr15 76033120 76033200 -27461774 - ID4 SINE ID -2 81 1 1 1165 562 335 12 25 chr15 76033275 76033437 -27461537 - RSINE1 SINE B4 -4 161 2 1 1165 312 273 0 57 chr15 76034328 76034341 -27460633 - ID_B1 SINE B4 -44 180 82 1 1165 490 146 22 33 chr15 76034341 76034433 -27460541 - B1_Mur4 SINE Alu -59 91 1 1 1165 1159 75 0 7 chr15 76040790 76040938 -27454036 - B1_Mus2 SINE Alu 0 147 1 1 1165 678 58 0 0 chr15 76041020 76041107 -27453867 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 1165 279 329 24 0 chr15 76041116 76041198 -27453776 - B4 SINE B4 -14 278 195 1 1165 317 180 49 0 chr15 76041176 76041237 -27453737 - B3 SINE B2 -152 64 1 1 1165 866 249 19 14 chr15 76042276 76042484 -27452490 + B3 SINE B2 3 211 -5 2 1165 1033 209 23 19 chr15 76042488 76042689 -27452285 + B3 SINE B2 1 202 -14 2 1165 831 157 88 15 chr15 76042689 76042825 -27452149 - B1_Mus2 SINE Alu -1 146 1 2 1165 1033 209 23 19 chr15 76042825 76042838 -27452136 + B3 SINE B2 203 216 0 2 1165 224 329 0 0 chr15 76042903 76042979 -27451995 - ID2 SINE ID -5 78 3 2 1165 666 286 121 28 chr15 76043013 76043261 -27451713 + B4A SINE B4 18 288 -4 2 1165 450 79 0 0 chr15 76043261 76043324 -27451650 + (CCA)n Simple_repeat Simple_repeat 3 65 0 2 1165 433 243 81 0 chr15 76043337 76043448 -27451526 + PB1D7 SINE Alu 1 120 0 2 1165 596 175 211 0 chr15 76043687 76043801 -27451173 + B1_Mur4 SINE Alu 1 138 -12 2 1165 425 256 121 23 chr15 76043885 76044017 -27450957 + ID_B1 SINE B4 80 224 0 2 1165 390 159 0 0 chr15 76044017 76044086 -27450888 + GA-rich Low_complexity Low_complexity 4 72 0 2 1165 465 194 20 20 chr15 76044112 76044212 -27450762 - PB1D9 SINE Alu -20 100 1 3 1165 186 43 0 0 chr15 76044508 76044531 -27450443 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1165 507 188 73 0 chr15 76044533 76044629 -27450345 - U6 snRNA snRNA -3 104 2 3 1165 421 319 49 67 chr15 76044650 76044875 -27450099 + ID_B1 SINE B4 2 222 -2 3 1165 381 22 0 0 chr15 76044882 76044928 -27450046 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1165 338 0 24 0 chr15 76045457 76045499 -27449475 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 3 1165 470 215 131 0 chr15 76045515 76045622 -27449352 - RSINE1 SINE B4 -37 128 8 3 1165 222 62 0 0 chr15 76045657 76045689 -27449285 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 3 1165 246 313 20 29 chr15 76045757 76045859 -27449115 + MLT1A1 LTR MaLR 1 101 -307 3 1165 625 120 197 41 chr15 76046127 76046249 -27448725 + B1_Mus1 SINE Alu 3 143 -5 3 1165 635 216 82 7 chr15 76046277 76046412 -27448562 + B1_Mm SINE Alu 1 145 -2 4 1165 309 195 65 3 chr15 76046427 76046496 -27448478 + B3A SINE B2 4 75 -141 4 1165 248 93 47 0 chr15 76046525 76046568 -27448406 + (GAAA)n Simple_repeat Simple_repeat 2 46 0 4 1165 234 0 0 0 chr15 76046571 76046597 -27448377 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 1165 3232 101 110 17 chr15 76046619 76047154 -27447820 + RMER4B LTR ERVK 1 585 0 4 1165 977 206 54 0 chr15 76047184 76047388 -27447586 + B3 SINE B2 2 216 0 4 1165 300 347 121 54 chr15 76047542 76047822 -27447152 + MLT1B LTR MaLR 7 305 -85 4 1165 672 186 34 60 chr15 76047919 76048068 -27446906 + B1_Mur1 SINE Alu 5 149 0 4 1165 367 168 86 34 chr15 76048068 76048185 -27446789 + MLT1A1-int LTR MaLR 35 157 -1214 3 1165 279 324 19 47 chr15 76048196 76048303 -27446671 + PB1 SINE Alu 6 109 -18 4 1165 436 281 104 61 chr15 76048383 76048595 -27446379 + ID_B1 SINE B4 2 222 -2 4 1165 552 15 0 0 chr15 76048604 76048669 -27446305 + (GAGAA)n Simple_repeat Simple_repeat 2 66 0 5 1165 1936 194 47 11 chr15 76048669 76049029 -27445945 + ORR1D1 LTR MaLR 2 374 0 5 1165 294 164 0 0 chr15 76049034 76049089 -27445885 + GA-rich Low_complexity Low_complexity 2 56 0 5 1165 399 283 78 3 chr15 76049093 76049227 -27445747 + B1_Mur2 SINE Alu 5 148 0 5 1165 376 241 23 0 chr15 76049216 76049303 -27445671 + B1_Mus2 SINE Alu 40 128 -19 5 1165 1365 260 157 42 chr15 76049356 76049947 -27445027 + MLT1A1-int LTR MaLR 312 1012 -477 3 1165 541 167 174 9 chr15 76050281 76050390 -27444584 + B1_Mur1 SINE Alu 4 130 -19 5 1165 1128 86 0 0 chr15 76050843 76050983 -27443991 + B1_Mus1 SINE Alu 4 143 -5 5 1165 1128 70 0 13 chr15 76051002 76051161 -27443813 + B2_Mm2 SINE B2 1 157 -38 5 1165 652 259 0 107 chr15 76051162 76051378 -27443596 - B3A SINE B2 -4 194 2 5 1165 326 214 200 19 chr15 76051472 76051577 -27443397 + PB1 SINE Alu 2 125 -2 5 1165 32 26 0 0 chr15 76051592 76051631 -27443343 + AT_rich Low_complexity Low_complexity 1 39 0 6 1165 878 157 8 0 chr15 76051637 76051771 -27443203 - B1_Mus2 SINE Alu -12 135 1 6 1165 35 0 0 0 chr15 76051773 76051808 -27443166 + AT_rich Low_complexity Low_complexity 1 35 0 6 1165 259 184 89 38 chr15 76051849 76051928 -27443046 + RLTR25B LTR ERVK 427 509 -519 6 1165 712 115 9 26 chr15 76051858 76051974 -27443000 + B1_Mur4 SINE Alu 37 150 0 6 1165 585 314 53 81 chr15 76052257 76052324 -27442650 + B4 SINE B4 17 70 -222 6 1165 1213 178 34 0 chr15 76052324 76052532 -27442442 + B3 SINE B2 2 216 0 6 1165 1377 61 0 0 chr15 76052539 76052719 -27442255 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 1165 585 314 53 81 chr15 76052719 76052865 -27442109 + B4 SINE B4 74 220 -72 6 1165 243 0 0 0 chr15 76052865 76052892 -27442082 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 6 1165 585 314 53 81 chr15 76052892 76052953 -27442021 + B4 SINE B4 221 291 -1 6 1165 363 290 90 0 chr15 76053116 76053216 -27441758 + RSINE1 SINE B4 9 117 -48 6 1165 342 0 0 0 chr15 76053477 76053515 -27441459 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 1165 506 241 58 14 chr15 76053517 76053656 -27441318 - RSINE1 SINE B4 -18 147 3 7 1165 1612 43 0 0 chr15 76053707 76053895 -27441079 - B2_Mm1a SINE B2 -4 189 2 7 1165 564 246 102 25 chr15 76053895 76054091 -27440883 - B3 SINE B2 -2 214 4 7 1165 431 254 72 0 chr15 76054206 76054344 -27440630 + L1M4 LINE L1 4878 5025 -1121 7 1165 706 249 42 0 chr15 76054358 76054523 -27440451 + B3 SINE B2 29 200 -16 7 1165 24 0 0 0 chr15 76054525 76054549 -27440425 + AT_rich Low_complexity Low_complexity 1 24 0 7 1165 376 234 26 0 chr15 76054562 76054639 -27440335 + ID4_ SINE ID 3 81 -2 7 1165 1276 130 38 0 chr15 76054698 76054882 -27440092 + B2_Mm2 SINE B2 1 191 -4 7 1165 1216 68 0 0 chr15 76054888 76055035 -27439939 + B1_Mus1 SINE Alu 2 148 0 7 1165 342 0 0 0 chr15 76055035 76055073 -27439901 + (A)n Simple_repeat Simple_repeat 1 38 0 8 1165 349 260 9 107 chr15 76055101 76055213 -27439761 + L1M4 LINE L1 5040 5140 -1006 7 1165 499 317 28 0 chr15 76055259 76055401 -27439573 + RSINE1 SINE B4 3 148 -17 8 1165 683 283 32 6 chr15 76055560 76055822 -27439152 + L1M4 LINE L1 5469 5736 -442 7 1165 446 274 20 0 chr15 76055854 76055956 -27439018 + PB1D10 SINE Alu 8 111 -6 8 1165 412 216 214 10 chr15 76056223 76056321 -27438653 - B1_Mus1 SINE Alu -1 119 2 8 1165 1175 108 84 0 chr15 76057767 76057933 -27437041 + B2_Mm2 SINE B2 2 181 -14 8 1165 21 0 0 0 chr15 76060000 76060021 -27434953 + GC_rich Low_complexity Low_complexity 1 21 0 8 1165 584 292 23 36 chr15 76064843 76065063 -27429911 + ID_B1 SINE B4 3 219 -5 8 1165 945 95 7 0 chr15 76064927 76065064 -27429910 + B1_Mur4 SINE Alu 9 146 -4 8 1165 270 0 0 0 chr15 76065067 76065097 -27429877 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 8 1165 273 57 0 0 chr15 76065128 76065163 -27429811 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 8 1165 250 212 30 15 chr15 76065164 76065231 -27429743 + GA-rich Low_complexity Low_complexity 2 69 0 9 1165 832 197 70 6 chr15 76065699 76065857 -27429117 + B3A SINE B2 1 168 -30 9 1165 22 35 0 0 chr15 76065896 76065925 -27429049 + AT_rich Low_complexity Low_complexity 1 29 0 9 1165 1183 62 7 0 chr15 76065927 76066072 -27428902 + B1_Mm SINE Alu 2 147 0 9 1165 222 281 12 24 chr15 76066126 76066210 -27428764 + B4 SINE B4 10 92 -200 9 1165 836 221 0 7 chr15 76066344 76066494 -27428480 + B1_Mur2 SINE Alu 1 149 0 9 1165 464 288 72 0 chr15 76066549 76066688 -27428286 - B1F SINE Alu 0 149 1 9 1165 510 261 155 5 chr15 76066899 76067092 -27427882 - ID_B1 SINE B4 0 224 3 9 1165 492 331 22 37 chr15 76067132 76067350 -27427624 - B3A SINE B2 0 216 1 9 1165 690 138 327 36 chr15 76067421 76067586 -27427388 + B3 SINE B2 1 213 -3 9 1165 890 242 32 0 chr15 76067623 76067809 -27427165 - B3 SINE B2 -24 192 1 1 1165 203 179 0 0 chr15 76067824 76067863 -27427111 + T-rich Low_complexity Low_complexity 1 39 0 1 1165 1043 95 0 52 chr15 76067863 76068018 -27426956 - B1_Mus1 SINE Alu 0 148 2 1 1165 1135 58 0 0 chr15 76068226 76068363 -27426611 + B1_Mus1 SINE Alu 1 137 -11 1 1165 639 60 0 0 chr15 76068363 76068447 -27426527 + (GAAA)n Simple_repeat Simple_repeat 3 86 0 1 1165 856 74 297 0 chr15 76068828 76068976 -27425998 - B2_Mm2 SINE B2 -2 193 2 1 1165 21 0 0 0 chr15 76069195 76069216 -27425758 + AT_rich Low_complexity Low_complexity 1 21 0 1 1165 619 139 20 10 chr15 76069216 76069318 -27425656 - B1_Mur1 SINE Alu -2 147 45 1 1165 265 265 9 89 chr15 76069236 76069348 -27425626 - RLTR25B LTR ERVK -508 520 418 1 1165 675 0 0 0 chr15 76069501 76069576 -27425398 + (CA)n Simple_repeat Simple_repeat 1 75 0 1 1165 345 277 93 51 chr15 76074296 76074414 -27420560 + RSINE1 SINE B4 43 165 0 1 1165 351 0 0 0 chr15 76074643 76074682 -27420292 + (TTA)n Simple_repeat Simple_repeat 2 40 0 1 1165 402 303 22 29 chr15 76074682 76074818 -27420156 - B1F1 SINE Alu -12 137 3 1 1165 349 277 130 7 chr15 76075369 76075507 -27419467 + Arthur1A DNA Tip100 11 165 -12 1 1165 701 271 92 116 chr15 76075679 76076050 -27418924 + MTE2a LTR MaLR 3 364 -15 1 1165 705 114 119 77 chr15 76076487 76076630 -27418344 - B1_Mur2 SINE Alu 0 149 1 1 1165 568 259 30 0 chr15 76076661 76076796 -27418178 + B1F SINE Alu 3 141 -8 1 1165 216 0 0 0 chr15 76077091 76077115 -27417859 + (CCCCG)n Simple_repeat Simple_repeat 5 28 0 1 1165 183 42 0 0 chr15 76078177 76078201 -27416773 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1 1165 1089 58 65 0 chr15 76082013 76082152 -27412822 - B1_Mus1 SINE Alu 0 148 1 1 1165 377 316 93 61 chr15 76082389 76082669 -27412305 + B4A SINE B4 2 290 -2 1 1165 613 215 61 31 chr15 76082844 76083007 -27411967 + MER90a LTR ERV1 29 196 -418 1 1165 205 175 138 17 chr15 76083474 76083532 -27411442 + L2b LINE L2 3310 3374 -1 1 1165 241 341 50 79 chr15 76084484 76084764 -27410210 + L1MEg1 LINE L1 510 781 -5454 1 1165 941 118 0 0 chr15 76084937 76085072 -27409902 + B1_Mur3 SINE Alu 3 137 -12 1 1165 1205 89 0 0 chr15 76085128 76085296 -27409678 - B2_Mm2 SINE B2 -25 170 3 1 1165 378 0 0 0 chr15 76085311 76085353 -27409621 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 1165 850 228 88 0 chr15 76085400 76085593 -27409381 + B3 SINE B2 1 210 -6 1 1165 222 304 17 8 chr15 76085626 76085759 -27409215 + ID4 SINE ID 2 135 -17 1 1165 493 227 192 55 chr15 76085866 76086085 -27408889 - Tigger9b DNA MER2_type -127 497 249 1 1165 874 226 13 86 chr15 76086108 76086340 -27408634 - B3 SINE B2 0 216 2 1 1165 329 336 53 15 chr15 76086341 76086474 -27408500 - Tigger9b DNA MER2_type -486 138 1 1 1165 2445 134 5 24 chr15 76087374 76087756 -27407218 - ORR1C1 LTR MaLR -3 375 1 1 1165 432 0 0 0 chr15 76088354 76088402 -27406572 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1165 300 53 0 0 chr15 76088569 76088607 -27406367 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 1165 447 190 129 65 chr15 76088612 76088736 -27406238 - B1_Mur2 SINE Alu -13 136 5 1 1165 912 128 13 63 chr15 76088769 76088927 -27406047 - B1_Mur4 SINE Alu 0 150 1 1 1165 471 325 40 7 chr15 76088959 76089111 -27405863 - RSINE1 SINE B4 0 165 9 1 1165 290 320 9 37 chr15 76089553 76089660 -27405314 + B4A SINE B4 53 156 -136 1 1165 236 154 113 19 chr15 76089675 76089728 -27405246 - MTD LTR MaLR -4 415 358 1 1165 1023 148 68 5 chr15 76089720 76089925 -27405049 + B2_Mm2 SINE B2 6 216 0 1 1165 1412 214 104 14 chr15 76089933 76090289 -27404685 - MTD LTR MaLR -30 389 2 1 1165 293 330 46 69 chr15 76090656 76090874 -27404100 - MIRb SINE MIR -6 262 50 1 1165 356 200 14 0 chr15 76091004 76091074 -27403900 + MLT1A LTR MaLR 1 71 -303 1 1165 570 197 0 0 chr15 76091089 76091206 -27403768 + (TA)n Simple_repeat Simple_repeat 2 118 0 1 1165 306 323 69 46 chr15 76091259 76091434 -27403540 + MLT1A LTR MaLR 173 351 -23 1 1165 252 0 0 0 chr15 76091574 76091602 -27403372 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1 1165 827 159 14 0 chr15 76091800 76091938 -27403036 - B1_Mur4 SINE Alu 0 150 11 1 1165 535 242 47 8 chr15 76092046 76092175 -27402799 + B1F1 SINE Alu 11 144 -5 1 1165 564 205 49 8 chr15 76092401 76092524 -27402450 + B1_Mur4 SINE Alu 3 130 -20 1 1165 190 228 0 37 chr15 76093304 76093386 -27401588 + (CATA)n Simple_repeat Simple_repeat 4 82 0 1 1165 701 229 7 7 chr15 76093433 76093578 -27401396 - B1_Mur1 SINE Alu -1 148 4 1 1165 683 197 31 23 chr15 76093580 76093710 -27401264 - B1_Mur3 SINE Alu -18 131 1 1 1165 333 0 0 0 chr15 76093750 76093787 -27401187 + (GA)n Simple_repeat Simple_repeat 1 37 0 1 1165 682 218 48 27 chr15 76094272 76094418 -27400556 + B1_Mur1 SINE Alu 1 149 0 1 1165 380 159 380 8 chr15 76095363 76095502 -27399472 + B3A SINE B2 2 185 -31 1 1165 306 0 0 0 chr15 76095502 76095536 -27399438 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1165 358 219 281 41 chr15 76095536 76095567 -27399407 + B3 SINE B2 186 213 -3 1 1165 270 282 45 99 chr15 76096105 76096306 -27398668 + L2 LINE L2 2277 2466 -953 1 1165 598 235 19 67 chr15 76096915 76097125 -27397849 - MLT2C2 LTR ERVL -262 202 3 1 1165 876 275 35 26 chr15 76097620 76097848 -27397126 - 7SK RNA RNA -100 231 2 1 1165 747 236 148 5 chr15 76100220 76100416 -27394558 + ID_B1 SINE B4 1 224 0 1 1165 621 120 149 113 chr15 76100682 76100823 -27394151 + B1_Mur4 SINE Alu 5 150 0 1 1165 256 24 0 47 chr15 76100846 76100889 -27394085 + (CCA)n Simple_repeat Simple_repeat 1 41 0 1 1165 302 348 114 33 chr15 76101101 76101312 -27393662 - B4 SINE B4 -63 229 2 1 1165 536 250 81 0 chr15 76101312 76101448 -27393526 - B1F SINE Alu -2 147 1 1 1165 1176 167 58 5 chr15 76101472 76101677 -27393297 + B3 SINE B2 1 216 0 1 1165 828 103 8 0 chr15 76101677 76101803 -27393171 + B1_Mus1 SINE Alu 1 127 -21 1 1165 197 108 27 0 chr15 76101808 76101845 -27393129 + (GAAA)n Simple_repeat Simple_repeat 4 41 0 1 1165 895 144 27 14 chr15 76102635 76102783 -27392191 + B1_Mur4 SINE Alu 1 150 0 1 1165 443 225 35 43 chr15 76102955 76103071 -27391903 - PB1D10 SINE Alu -2 115 1 1 1165 1061 113 55 33 chr15 76103127 76103310 -27391664 - B2_Mm2 SINE B2 -8 187 1 1 1165 887 362 33 30 chr15 76103399 76103761 -27391213 + MER115 DNA Tip100 331 693 0 1 1165 803 176 35 14 chr15 76103933 76104077 -27390897 + B1_Mus1 SINE Alu 1 147 -1 1 1165 878 186 198 0 chr15 76104104 76104281 -27390693 + B3 SINE B2 5 216 0 1 1165 470 335 43 25 chr15 76104600 76104762 -27390212 + RSINE1 SINE B4 1 165 0 1 1165 405 131 272 1 chr15 76104775 76104878 -27390096 - B1_Mur4 SINE Alu -2 148 17 1 1165 622 292 18 0 chr15 76105024 76105192 -27389782 - MTEa LTR MaLR -168 211 41 1 1165 504 280 8 8 chr15 76105194 76105327 -27389647 - ID_B1 SINE B4 -2 222 90 1 1165 226 224 20 0 chr15 76105342 76105391 -27389583 - MTEa LTR MaLR -329 50 1 1 1165 736 241 7 0 chr15 76105649 76105790 -27389184 + B1_Mur1 SINE Alu 1 142 -7 1 1165 613 184 189 58 chr15 76105796 76105986 -27388988 + B3 SINE B2 2 216 0 1 1165 827 96 77 49 chr15 76106665 76106808 -27388166 + B1_Mus1 SINE Alu 2 148 0 1 1165 257 294 0 0 chr15 76106834 76106902 -27388072 + PB1D10 SINE Alu 50 117 0 1 1165 270 0 0 0 chr15 76107047 76107077 -27387897 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1 1165 873 60 0 0 chr15 76107079 76107196 -27387778 - B1_Mus1 SINE Alu -4 144 28 1 1165 942 171 55 11 chr15 76108199 76108382 -27386592 + B2_Mm2 SINE B2 1 191 -4 1 1165 1630 27 0 21 chr15 76108753 76108942 -27386032 + B2_Mm1a SINE B2 1 185 -8 1 1165 247 286 38 70 chr15 76108978 76109027 -27385947 - L1MB8 LINE L1 0 6178 6132 1 1165 495 100 541 16 chr15 76109027 76109149 -27385825 - B2_Mm2 SINE B2 -9 186 1 1 1165 247 286 38 70 chr15 76109149 76109257 -27385717 - L1MB8 LINE L1 -47 6131 6026 1 1165 264 234 38 105 chr15 76109440 76109493 -27385481 - L1MB8 LINE L1 -405 5779 5730 1 1165 207 0 0 0 chr15 76109493 76109516 -27385458 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1 1165 264 234 38 105 chr15 76109516 76109567 -27385407 - L1MB8 LINE L1 -455 5729 5682 1 1165 377 272 122 9 chr15 76109784 76109899 -27385075 - RSINE1 SINE B4 -26 139 12 1 1165 399 220 93 129 chr15 76110007 76110200 -27384774 - B3 SINE B2 -28 188 2 1 1165 1142 76 7 0 chr15 76110269 76110414 -27384560 - B1_Mm SINE Alu 0 147 2 1 1165 703 264 0 13 chr15 76110643 76110793 -27384181 - RSINE1 SINE B4 -14 151 4 1 1165 667 184 79 8 chr15 76111098 76111224 -27383750 + B1_Mur4 SINE Alu 14 148 -2 1 1165 285 210 0 0 chr15 76111228 76111290 -27383684 + GA-rich Low_complexity Low_complexity 2 63 0 1 1165 1042 210 126 14 chr15 76111308 76111593 -27383381 - ORR1D1 LTR MaLR -57 317 1 1 1165 203 122 20 0 chr15 76111946 76111995 -27382979 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 1 1165 360 0 0 0 chr15 76112316 76112356 -27382618 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1165 552 283 81 0 chr15 76112373 76112536 -27382438 + B3A SINE B2 2 177 -21 1 1165 369 0 0 0 chr15 76112536 76112577 -27382397 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1165 775 154 123 0 chr15 76112587 76112717 -27382257 - B1_Mur3 SINE Alu -3 146 1 1 1165 983 238 45 0 chr15 76112784 76112986 -27381988 - B3 SINE B2 -4 212 2 1 1165 806 193 0 6 chr15 76113016 76113188 -27381786 + CT-rich Low_complexity Low_complexity 1 171 0 1 1165 1137 95 0 0 chr15 76113188 76113335 -27381639 - B1_Mus1 SINE Alu 0 148 2 2 1165 939 153 62 11 chr15 76116000 76116178 -27378796 - B2_Mm2 SINE B2 -8 187 1 2 1165 366 23 0 0 chr15 76116238 76116281 -27378693 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 1165 940 123 0 0 chr15 76116281 76116419 -27378555 - B1_Mus2 SINE Alu -9 138 1 2 1165 245 306 49 93 chr15 76116419 76116486 -27378488 + YREP_Mm Unknown Unknown 186 381 -1431 2 1165 297 209 0 15 chr15 76116508 76116576 -27378398 + B1_Mur4 SINE Alu 84 150 0 2 1165 502 86 25 0 chr15 76116578 76116659 -27378315 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 2 1165 482 46 15 0 chr15 76116737 76116802 -27378172 + (TC)n Simple_repeat Simple_repeat 1 66 0 2 1165 1507 63 15 20 chr15 76116802 76116997 -27377977 - B2_Mm2 SINE B2 0 195 2 2 1165 518 213 62 5 chr15 76117020 76117185 -27377789 - B3A SINE B2 -7 188 1 2 1165 762 11 0 0 chr15 76117636 76117723 -27377251 + (GGA)n Simple_repeat Simple_repeat 2 88 0 2 1165 1538 120 56 4 chr15 76117725 76117992 -27376982 - RLTR28B LTR ERVL -199 282 2 2 1165 411 206 43 0 chr15 76118136 76118228 -27376746 - ID_B1 SINE B4 -61 163 68 2 1165 369 286 18 0 chr15 76118859 76118975 -27375999 - B1F1 SINE Alu -21 128 6 2 1165 569 266 108 22 chr15 76118996 76119195 -27375779 - B3A SINE B2 0 216 2 2 1165 304 321 94 29 chr15 76119662 76119800 -27375174 - B1F2 SINE Alu 0 149 3 2 1165 365 319 28 49 chr15 76119823 76119965 -27375009 - B1F SINE Alu -6 143 5 2 1165 558 263 85 48 chr15 76119992 76120180 -27374794 + B3A SINE B2 2 196 -2 2 1165 1113 65 7 0 chr15 76120271 76120409 -27374565 + B1_Mus1 SINE Alu 1 139 -9 2 1165 235 200 346 12 chr15 76120458 76120539 -27374435 + ID_B1 SINE B4 11 118 -106 2 1165 1641 106 28 90 chr15 76120546 76120587 -27374387 - ORR1A3 LTR MaLR -13 313 286 2 1165 3617 59 41 2 chr15 76120587 76121047 -27373927 - L1_Mus1 LINE L1 0 6567 6090 2 1165 1641 106 28 90 chr15 76121047 76121328 -27373646 - ORR1A3 LTR MaLR -41 285 11 2 1165 423 234 144 8 chr15 76121335 76121460 -27373514 - RMER13A LTR ERVK -307 553 412 2 1165 349 198 0 21 chr15 76121460 76121553 -27373421 + CT-rich Low_complexity Low_complexity 3 93 0 2 1165 352 100 0 59 chr15 76123452 76123537 -27371437 + Lx4B LINE L1 6979 7058 0 2 1165 225 0 0 0 chr15 76123899 76123924 -27371050 + (CCCCCA)n Simple_repeat Simple_repeat 5 29 0 2 1165 994 97 14 27 chr15 76124188 76124336 -27370638 + B1_Mur4 SINE Alu 5 150 0 2 1165 3924 133 102 17 chr15 76129331 76130026 -27364948 + RMER6A LTR ERVK 3 756 0 2 1165 629 263 5 69 chr15 76130151 76130355 -27364619 + B3A SINE B2 2 192 -6 2 1165 706 248 15 147 chr15 76134047 76134438 -27360536 + RLTR20D LTR ERVK 1 439 -95 2 1165 211 136 23 0 chr15 76137748 76137792 -27357182 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1165 533 15 15 0 chr15 76138343 76138409 -27356565 + (TC)n Simple_repeat Simple_repeat 1 67 0 2 1165 974 72 48 0 chr15 76138409 76138534 -27356440 - B1_Mus1 SINE Alu -16 132 2 2 1165 296 243 28 14 chr15 76139235 76139306 -27355668 + ID SINE ID 2 73 -151 2 1165 285 264 24 25 chr15 76139306 76139318 -27355656 + ID4_ SINE ID 2 85 -67 2 1165 288 0 0 0 chr15 76139318 76139350 -27355624 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1165 235 345 8 33 chr15 76139350 76139397 -27355577 + BC1_Mm scRNA scRNA 86 130 -22 2 1165 259 82 0 164 chr15 76139397 76139470 -27355504 + polypurine Low_complexity Low_complexity 2 62 0 2 1165 513 0 0 0 chr15 76140735 76140792 -27354182 + (TA)n Simple_repeat Simple_repeat 1 57 0 2 1165 441 0 0 0 chr15 76141446 76141495 -27353479 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 1165 991 252 9 0 chr15 76141575 76141789 -27353185 - B3 SINE B2 0 216 1 2 1165 294 364 8 0 chr15 76142046 76142164 -27352810 + MLT1E3 LTR MaLR 159 277 -347 2 1165 424 265 14 57 chr15 76142238 76142378 -27352596 + RSINE1 SINE B4 15 148 -17 2 1165 270 203 42 42 chr15 76142479 76142551 -27352423 + ID_B1 SINE B4 127 198 -26 2 1165 333 0 0 0 chr15 76142886 76142923 -27352051 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1165 332 304 49 28 chr15 76142933 76143075 -27351899 + RLTR14 LTR ERV1 224 368 -14 2 1165 405 0 0 0 chr15 76143240 76143285 -27351689 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 1165 269 157 20 0 chr15 76143286 76143337 -27351637 - B1_Mus2 SINE Alu -25 122 71 2 1165 500 289 13 20 chr15 76143428 76143580 -27351394 + RSINE1 SINE B4 3 153 -12 2 1165 1951 162 31 31 chr15 76143675 76144095 -27350879 - RMER10A LTR ERVL -20 422 3 2 1165 636 115 352 0 chr15 76144503 76144642 -27350332 + B2_Mm2 SINE B2 2 189 -6 2 1165 1144 102 0 0 chr15 76144646 76144793 -27350181 + B1_Mus2 SINE Alu 1 147 0 2 1165 297 181 18 16 chr15 76144822 76144892 -27350082 + B1_Mur4 SINE Alu 41 150 0 2 1165 1643 26 0 40 chr15 76145606 76145806 -27349168 - B2_Mm1a SINE B2 0 193 2 2 1165 272 324 71 82 chr15 76145957 76146239 -27348735 - RMER10A LTR ERVL -145 297 19 2 1165 354 260 0 77 chr15 76146375 76146479 -27348495 + PB1D9 SINE Alu 24 119 -1 2 1165 1393 92 0 53 chr15 76146523 76146729 -27348245 - B2_Mm2 SINE B2 0 195 1 2 1165 319 315 134 23 chr15 76146847 76147019 -27347955 - MLT1D LTR MaLR -307 198 8 2 1165 2345 95 0 60 chr15 76147118 76147465 -27347509 - ORR1A3 LTR MaLR 0 326 1 2 1165 564 301 60 8 chr15 76147550 76147798 -27347176 + L1M4b LINE L1 1209 1469 -5865 2 1165 225 0 0 0 chr15 76147902 76147927 -27347047 + (TTTC)n Simple_repeat Simple_repeat 1 25 0 2 1165 1023 92 28 14 chr15 76147927 76148071 -27346903 - B1_Mus1 SINE Alu -1 147 2 2 1165 379 62 0 0 chr15 76148232 76148297 -27346677 + B2_Mm1t SINE B2 128 192 -1 2 1165 2082 251 128 36 chr15 76148301 76149221 -27345753 + Lx5 LINE L1 6178 7417 -43 2 1165 378 0 0 0 chr15 76149401 76149443 -27345531 + (TTA)n Simple_repeat Simple_repeat 1 42 0 2 1165 655 252 0 13 chr15 76149455 76149604 -27345370 + B1_Mur1 SINE Alu 2 148 -1 2 1165 318 204 152 10 chr15 76149647 76149746 -27345228 + B1F2 SINE Alu 37 149 0 2 1165 349 256 13 0 chr15 76149746 76149824 -27345150 - ID_B1 SINE B4 -9 215 137 2 1165 385 301 39 70 chr15 76149993 76150222 -27344752 + Arthur1 DNA Tip100 3333 3554 -393 2 1165 520 269 246 0 chr15 76150262 76150429 -27344545 - B3 SINE B2 -8 208 1 2 1165 508 253 92 126 chr15 76150454 76150487 -27344487 + RCHARR1 DNA MER1_type 177 208 -766 2 1165 351 0 0 0 chr15 76150487 76150526 -27344448 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1165 508 253 92 126 chr15 76150526 76150809 -27344165 + RCHARR1 DNA MER1_type 209 482 -492 2 1165 251 337 0 82 chr15 76150896 76150993 -27343981 - B4A SINE B4 -4 288 200 2 1165 489 17 0 0 chr15 76151191 76151249 -27343725 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1165 350 270 15 96 chr15 76151262 76151397 -27343577 - RSINE1 SINE B4 -41 124 1 2 1165 1231 234 87 6 chr15 76151587 76151909 -27343065 + RCHARR1 DNA MER1_type 467 814 -160 2 1165 395 273 100 95 chr15 76151915 76152105 -27342869 + B3A SINE B2 7 197 -1 2 1165 659 213 51 7 chr15 76152109 76152246 -27342728 + B1_Mur1 SINE Alu 1 143 -6 2 1165 219 86 29 0 chr15 76152703 76152738 -27342236 - B3A SINE B2 -149 49 14 2 145 525 278 65 6 chr15 76152829 76152999 -27341975 + Lx8 LINE L1 6941 7120 -353 2 1166 310 363 154 13 chr15 76153115 76153414 -27341560 + Arthur1 DNA Tip100 3554 3894 -53 2 1166 984 259 152 20 chr15 76153475 76153877 -27341097 + MER68 LTR ERVL 74 528 -35 2 1166 1007 226 110 90 chr15 76153931 76154432 -27340542 + RMER4B LTR ERVK 17 455 -11 2 1166 341 215 116 21 chr15 76154487 76154582 -27340392 + MT2B LTR ERVL 154 257 -344 2 1166 280 279 114 15 chr15 76154489 76154502 -27340472 + ID_B1 SINE B4 80 135 -89 2 1166 593 109 158 0 chr15 76154502 76154603 -27340371 + B1_Mur3 SINE Alu 13 129 -20 2 1166 280 279 114 15 chr15 76154603 76154620 -27340354 + ID_B1 SINE B4 136 223 -1 2 1166 293 111 0 36 chr15 76154620 76154676 -27340298 + (GAAA)n Simple_repeat Simple_repeat 1 54 0 2 1166 663 256 56 71 chr15 76154695 76154893 -27340081 + B3A SINE B2 1 195 -3 2 1166 484 331 24 12 chr15 76154910 76155078 -27339896 + MTEa LTR MaLR 53 222 -157 2 1166 201 154 0 0 chr15 76156337 76156376 -27338598 + GA-rich Low_complexity Low_complexity 2 40 0 2 1166 204 42 0 113 chr15 76156427 76156480 -27338494 + T-rich Low_complexity Low_complexity 2 48 0 2 1166 683 176 79 22 chr15 76156488 76156627 -27338347 - B1_Mus2 SINE Alu 0 147 1 2 1166 1301 73 22 22 chr15 76156967 76157150 -27337824 + B2_Mm1t SINE B2 2 184 -9 2 1166 755 207 24 12 chr15 76157415 76157581 -27337393 + B3 SINE B2 47 214 -2 2 1166 249 261 29 0 chr15 76158200 76158269 -27336705 + MER68 LTR ERVL 275 345 -218 2 1166 586 161 42 0 chr15 76158452 76158570 -27336404 + RMER4B LTR ERVK 17 139 -446 2 1166 198 0 0 0 chr15 76158660 76158682 -27336292 + (T)n Simple_repeat Simple_repeat 1 22 0 2 1166 929 16 207 0 chr15 76160535 76160656 -27334318 - B1_Mur4 SINE Alu -3 147 2 2 1166 428 167 158 0 chr15 76160997 76161111 -27333863 + URR1B DNA MER1_type 94 225 0 2 1166 902 137 13 52 chr15 76162052 76162206 -27332768 - B1_Mus1 SINE Alu 0 148 1 2 1166 1216 48 0 14 chr15 76166942 76167089 -27327885 - B1_Mm SINE Alu -2 145 1 2 1166 1444 42 15 36 chr15 76167089 76167285 -27327689 - B2_Mm2 SINE B2 0 195 4 2 1166 350 85 17 0 chr15 76167289 76167348 -27327626 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 1166 289 209 183 61 chr15 76167378 76167470 -27327504 + B1F SINE Alu 18 117 0 3 1166 369 246 116 18 chr15 76167486 76167598 -27327376 + PB1 SINE Alu 5 127 0 3 1166 395 19 75 0 chr15 76167951 76168004 -27326970 - MTA_Mm LTR MaLR 0 400 344 3 1166 2685 40 6 8 chr15 76168852 76169207 -27325767 - MTA_Mm LTR MaLR -42 354 1 3 1166 984 73 65 7 chr15 76169268 76169406 -27325568 + B1_Mus2 SINE Alu 2 147 0 3 1166 180 0 0 0 chr15 76169407 76169427 -27325547 + (GAAA)n Simple_repeat Simple_repeat 2 21 0 3 1166 217 159 47 16 chr15 76169722 76169786 -27325188 + (GTTTG)n Simple_repeat Simple_repeat 1 66 0 3 1166 239 188 227 34 chr15 76169819 76169907 -27325067 - ID_B1 SINE B4 -2 222 118 3 1166 4294 52 13 5 chr15 76170007 76170633 -27324341 + ORR1A1-int LTR MaLR 573 1762 -30 3 1166 390 21 0 0 chr15 76171088 76171135 -27323839 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1166 838 154 0 29 chr15 76171135 76171275 -27323699 - B1_Mus1 SINE Alu -8 140 5 3 1166 850 286 71 21 chr15 76171718 76172000 -27322974 + Lx6 LINE L1 7165 7460 0 3 1166 236 290 140 0 chr15 76172805 76172905 -27322069 - L1MB5 LINE L1 -167 6007 5894 3 1166 357 23 0 0 chr15 76172905 76172912 -27322062 + (T)n Simple_repeat Simple_repeat 1 7 0 3 1166 985 67 89 0 chr15 76172912 76173047 -27321927 - B1_Mm SINE Alu 0 147 1 3 1166 357 23 0 0 chr15 76173047 76173083 -27321891 + (T)n Simple_repeat Simple_repeat 1 36 0 3 1166 419 316 47 31 chr15 76173083 76173276 -27321698 - L1MB5 LINE L1 -274 5900 5705 3 1166 1012 68 20 7 chr15 76173279 76173426 -27321548 + B2_Mm2 SINE B2 1 149 -46 3 1166 981 195 27 5 chr15 76176512 76176698 -27318276 + B3 SINE B2 7 196 -20 3 1166 216 0 0 0 chr15 76178831 76178855 -27316119 + (CTGGGG)n Simple_repeat Simple_repeat 2 25 0 3 1166 316 276 48 58 chr15 76179011 76179023 -27315951 + B4A SINE B4 17 25 -267 3 1166 749 136 87 8 chr15 76179023 76179149 -27315825 - B1_Mus1 SINE Alu -12 136 1 3 1166 316 302 35 72 chr15 76179149 76179282 -27315692 + B4A SINE B4 26 148 -76 3 1166 204 290 16 0 chr15 76179379 76179441 -27315533 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 1166 489 323 0 0 chr15 76179471 76179604 -27315370 + B1F1 SINE Alu 11 143 -6 3 1166 1200 177 23 5 chr15 76179755 76179976 -27314998 + URR1B DNA MER1_type 1 225 0 3 1166 197 337 20 40 chr15 76180741 76180840 -27314134 - MIR SINE MIR -42 220 124 3 1166 211 200 0 22 chr15 76186260 76186306 -27308668 + C-rich Low_complexity Low_complexity 1 45 0 3 1166 840 147 7 56 chr15 76189931 76190075 -27304899 + B1_Mur3 SINE Alu 2 138 -11 3 1166 180 0 0 0 chr15 76190075 76190095 -27304879 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 1166 225 245 38 0 chr15 76191030 76191083 -27303891 + GA-rich Low_complexity Low_complexity 3 57 0 3 1166 546 16 0 0 chr15 76192327 76192390 -27302584 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 3 1166 1067 83 20 7 chr15 76192394 76192540 -27302434 - B1_Mus1 SINE Alu 0 148 1 3 1166 456 186 0 0 chr15 76192540 76192653 -27302321 + T-rich Low_complexity Low_complexity 1 113 0 3 1166 483 80 13 13 chr15 76192690 76192766 -27302208 - B1_Mus2 SINE Alu 0 147 72 3 1166 1119 98 6 0 chr15 76192765 76192928 -27302046 - B2_Mm1t SINE B2 -28 165 2 3 1166 651 60 0 0 chr15 76193548 76193632 -27301342 + (GGA)n Simple_repeat Simple_repeat 2 85 0 3 1166 648 204 58 0 chr15 76194394 76194531 -27300443 - B1_Mur1 SINE Alu -2 147 3 3 1166 248 105 40 59 chr15 76194716 76194817 -27300157 + T-rich Low_complexity Low_complexity 1 99 0 3 1166 180 0 0 0 chr15 76194825 76194845 -27300129 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1166 545 144 10 0 chr15 76194857 76194954 -27300020 - B1_Mur3 SINE Alu 0 149 52 3 1166 470 37 37 12 chr15 76195001 76195083 -27299891 + (TTG)n Simple_repeat Simple_repeat 2 85 0 3 1166 821 199 95 0 chr15 76195086 76195406 -27299568 + MTD LTR MaLR 19 419 0 3 1166 1550 57 0 25 chr15 76195448 76195647 -27299327 + B2_Mm2 SINE B2 1 194 -1 3 1166 1274 34 0 0 chr15 76195647 76195793 -27299181 + B1_Mm SINE Alu 1 147 0 3 1166 192 135 0 0 chr15 76195793 76195830 -27299144 + (A)n Simple_repeat Simple_repeat 1 37 0 3 1166 485 264 38 145 chr15 76196004 76196044 -27298930 - MTE2a LTR MaLR -6 373 337 3 1166 669 171 160 15 chr15 76196044 76196175 -27298799 + B1_Mur4 SINE Alu 1 150 0 3 1166 485 264 38 145 chr15 76196175 76196191 -27298783 - MTE2a LTR MaLR -43 336 336 3 1166 512 219 123 0 chr15 76196191 76196305 -27298669 + B1_Mus2 SINE Alu 1 128 -19 3 1166 485 264 38 145 chr15 76196305 76196482 -27298492 - MTE2a LTR MaLR -43 336 164 3 1166 339 109 0 18 chr15 76196497 76196553 -27298421 - B2_Mm2 SINE B2 -94 101 47 3 1166 898 123 168 0 chr15 76196636 76196791 -27298183 - B2_Mm1t SINE B2 -12 181 1 3 1166 1511 31 0 147 chr15 76196800 76197025 -27297949 - B2_Mm1a SINE B2 -1 192 1 3 1166 1455 193 136 40 chr15 76197042 76197275 -27297699 - RLTR19 LTR ERVK -55 444 204 3 1166 972 135 92 17 chr15 76197275 76197448 -27297526 - B2_Mm2 SINE B2 -8 187 2 3 1166 1395 64 15 36 chr15 76197458 76197493 -27297481 - B2_Mm1a SINE B2 -1 192 161 3 1166 207 0 0 0 chr15 76197493 76197516 -27297458 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 3 1166 1395 64 15 36 chr15 76197516 76197675 -27297299 - B2_Mm1a SINE B2 -33 160 2 3 1166 1455 193 136 40 chr15 76197675 76197835 -27297139 - RLTR19 LTR ERVK -303 196 1 3 1166 331 268 126 139 chr15 76197835 76198066 -27296908 - MTE2a LTR MaLR -137 242 15 3 1166 419 230 23 0 chr15 76198084 76198171 -27296803 - PB1D7 SINE Alu -6 114 26 3 1166 953 53 110 22 chr15 76198200 76198336 -27296638 + B1_Mus1 SINE Alu 1 148 0 3 1166 247 310 129 47 chr15 76198739 76198932 -27296042 + MLT1K LTR MaLR 387 595 0 3 1166 734 53 0 0 chr15 76201749 76201844 -27293130 + B1_Mus2 SINE Alu 53 147 0 3 1166 668 242 0 0 chr15 76205610 76205742 -27289232 - B3A SINE B2 -66 132 1 3 1166 517 189 32 0 chr15 76205922 76206017 -27288957 + URR1B DNA MER1_type 45 142 -83 3 1166 2290 152 63 25 chr15 76206031 76206058 -27288916 + RMER4A LTR ERVK 6 32 -434 3 1166 498 114 0 0 chr15 76206058 76206137 -27288837 + (CA)n Simple_repeat Simple_repeat 2 80 0 3 1166 2290 152 63 25 chr15 76206137 76206553 -27288421 + RMER4A LTR ERVK 33 465 -1 3 1166 1238 102 40 0 chr15 76206566 76206743 -27288231 - B2_Mm1a SINE B2 -8 185 2 3 1166 462 36 0 0 chr15 76206811 76206867 -27288107 + (TTCC)n Simple_repeat Simple_repeat 2 57 0 3 1166 252 0 0 0 chr15 76206867 76206895 -27288079 + (TTC)n Simple_repeat Simple_repeat 3 30 0 3 1166 315 71 0 0 chr15 76206892 76206934 -27288040 + (TC)n Simple_repeat Simple_repeat 1 42 0 3 1166 1170 88 0 0 chr15 76206934 76207082 -27287892 - B1_Mus1 SINE Alu 0 148 1 3 1166 1252 63 23 0 chr15 76207085 76207260 -27287714 - B2_Mm2 SINE B2 -2 193 15 3 1166 1423 70 27 5 chr15 76207274 76207462 -27287512 - B2_Mm2 SINE B2 -1 194 3 3 1166 351 0 0 0 chr15 76208214 76208253 -27286721 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1166 856 211 14 85 chr15 76208439 76208662 -27286312 - B3 SINE B2 -4 212 6 3 1166 885 139 66 0 chr15 76208705 76208842 -27286132 + B1_Mus2 SINE Alu 2 147 0 3 1166 1068 89 13 27 chr15 76208844 76208994 -27285980 + B1_Mus1 SINE Alu 1 148 0 3 1166 353 230 196 68 chr15 76209024 76209187 -27285787 - B3A SINE B2 -14 184 1 3 1166 1437 99 5 0 chr15 76209597 76209789 -27285185 - B2_Mm1a SINE B2 0 193 1 3 1166 937 148 0 20 chr15 76210472 76210624 -27284350 - B1_Mur2 SINE Alu 0 149 1 3 1166 26 30 0 0 chr15 76210966 76210999 -27283975 + GC_rich Low_complexity Low_complexity 1 33 0 3 1166 843 28 0 0 chr15 76212752 76212858 -27282116 - B1_Mm SINE Alu -8 139 34 3 1166 768 145 14 42 chr15 76213944 76214088 -27280886 - B1_Mur2 SINE Alu -1 148 9 3 1166 25 0 0 0 chr15 76214088 76214113 -27280861 + AT_rich Low_complexity Low_complexity 1 25 0 3 1166 798 270 23 14 chr15 76214113 76214327 -27280647 - B3 SINE B2 0 216 1 3 1166 334 293 8 8 chr15 76214350 76214469 -27280505 - ID4_ SINE ID -31 121 3 3 1166 348 184 0 26 chr15 76214554 76214632 -27280342 - B1_Mur3 SINE Alu -1 148 73 3 1166 485 275 87 29 chr15 76214635 76214807 -27280167 - B3A SINE B2 0 198 17 3 1166 207 114 0 0 chr15 76214831 76214866 -27280108 + (T)n Simple_repeat Simple_repeat 1 35 0 3 1166 845 57 98 0 chr15 76214866 76214988 -27279986 - B1_Mus1 SINE Alu 0 148 15 3 1166 1424 54 32 21 chr15 76215005 76215195 -27279779 - B2_Mm1a SINE B2 -1 192 1 3 1166 276 54 0 0 chr15 76215198 76215235 -27279739 - B2_Mm2 SINE B2 -157 38 2 3 1166 283 230 120 0 chr15 76215235 76215332 -27279642 - BC1_Mm scRNA scRNA -24 128 20 3 1166 393 328 31 15 chr15 76215402 76215532 -27279442 - ID_B1 SINE B4 -21 203 72 3 1166 28 29 0 0 chr15 76215723 76215758 -27279216 + AT_rich Low_complexity Low_complexity 1 35 0 3 1166 724 238 38 0 chr15 76215765 76215925 -27279049 - B3 SINE B2 -13 203 38 3 1166 698 111 0 18 chr15 76216407 76216517 -27278457 - B1_Mur1 SINE Alu -1 148 41 3 1166 221 287 66 103 chr15 76216415 76216551 -27278423 - B4A SINE B4 -72 220 90 3 1166 212 225 0 0 chr15 76216685 76216725 -27278249 + C-rich Low_complexity Low_complexity 2 41 0 3 1166 423 197 31 93 chr15 76216828 76216855 -27278119 + MT2B LTR ERVL 137 155 -446 3 1166 894 26 0 0 chr15 76216855 76216971 -27278003 + B1_Mus2 SINE Alu 1 116 -31 3 1166 333 228 163 0 chr15 76216969 76217092 -27277882 - ORR1D2 LTR MaLR -78 292 150 3 1166 404 283 20 0 chr15 76217984 76218083 -27276891 - ID_B1 SINE B4 -6 218 118 3 1166 189 0 0 0 chr15 76218291 76218312 -27276662 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 4 1166 346 247 0 0 chr15 76218316 76218389 -27276585 - B1_Mus1 SINE Alu -64 84 12 4 1166 578 273 70 21 chr15 76218487 76218674 -27276300 - B3A SINE B2 0 198 3 4 1166 1333 165 248 0 chr15 76218843 76219177 -27275797 + MTD LTR MaLR 1 405 -14 4 1166 355 262 106 27 chr15 76219250 76219635 -27275339 - RLTR12B LTR ERVK -56 303 10 4 1166 503 360 27 23 chr15 76219645 76219864 -27275110 - MLT1E2 LTR MaLR -306 321 102 4 1166 839 150 7 0 chr15 76219867 76220014 -27274960 - B1_Mur3 SINE Alu 0 149 2 4 1166 302 296 31 118 chr15 76219870 76220031 -27274943 - B4 SINE B4 -69 223 77 4 1166 644 261 70 5 chr15 76220617 76220802 -27274172 - B3A SINE B2 -1 197 1 4 1166 730 244 4 97 chr15 76220842 76221069 -27273905 - B3 SINE B2 -6 210 5 4 1166 211 385 0 0 chr15 76221102 76221185 -27273789 + PB1D10 SINE Alu 1 83 -34 4 1166 745 222 74 106 chr15 76221322 76221539 -27273435 - B3 SINE B2 -5 211 2 4 1166 282 212 146 39 chr15 76221547 76221650 -27273324 - B3 SINE B2 0 216 103 4 1166 961 76 152 6 chr15 76221654 76221681 -27273293 - B2_Mm2 SINE B2 0 195 146 4 1166 447 100 0 0 chr15 76221681 76221751 -27273223 + (CA)n Simple_repeat Simple_repeat 2 71 0 4 1166 961 76 152 6 chr15 76221751 76221881 -27273093 - B2_Mm2 SINE B2 -50 145 15 4 1166 447 177 103 10 chr15 76221876 76221973 -27273001 - B3A SINE B2 -76 122 17 4 1166 345 75 0 0 chr15 76222000 76222053 -27272921 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1166 532 221 28 19 chr15 76222054 76222160 -27272814 - RSINE1 SINE B4 -44 121 15 4 1166 694 125 58 0 chr15 76222216 76222227 -27272747 - B1_Mur4 SINE Alu -1 149 139 4 1166 216 86 0 0 chr15 76222227 76222262 -27272712 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1166 694 125 58 0 chr15 76222262 76222370 -27272604 - B1_Mur4 SINE Alu -12 138 24 4 1166 748 113 248 38 chr15 76223616 76223773 -27271201 - B2_Mm2 SINE B2 -4 191 2 4 1166 230 371 0 0 chr15 76224949 76225046 -27269928 - ID_B1 SINE B4 -48 176 80 4 1166 246 267 40 13 chr15 76225063 76225139 -27269835 - RSINE1 SINE B4 -3 162 85 4 1166 915 149 7 33 chr15 76225179 76225332 -27269642 - B1_Mur3 SINE Alu 0 149 1 4 1166 503 237 125 40 chr15 76225343 76225519 -27269455 - B3A SINE B2 -4 194 4 4 1166 1501 63 21 0 chr15 76225532 76225722 -27269252 - B2_Mm2 SINE B2 -1 194 1 4 1166 378 234 20 60 chr15 76225722 76225816 -27269158 - RSINE1 SINE B4 -73 92 1 4 1166 306 145 237 0 chr15 76225816 76225886 -27269088 - B1_Mur3 SINE Alu -60 89 2 4 1166 460 288 38 0 chr15 76227048 76227180 -27267794 - ID_B1 SINE B4 -64 160 24 4 1166 1389 312 147 44 chr15 76227775 76228463 -27266511 - MER21B LTR ERV1 -102 761 3 4 1166 884 159 7 0 chr15 76228581 76228719 -27266255 - B1_Mur3 SINE Alu -10 139 1 4 1166 180 0 0 0 chr15 76229075 76229095 -27265879 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 1166 32 82 0 10 chr15 76229334 76229367 -27265607 + AT_rich Low_complexity Low_complexity 1 33 0 4 1166 941 165 198 6 chr15 76229367 76229544 -27265430 - B3 SINE B2 -4 212 2 4 1166 32 82 0 10 chr15 76229544 76229609 -27265365 + AT_rich Low_complexity Low_complexity 1 65 0 4 1166 714 199 0 8 chr15 76229683 76229815 -27265159 - B3 SINE B2 -85 131 1 4 1166 862 233 19 14 chr15 76229819 76230028 -27264946 - B3 SINE B2 -1 215 6 4 1166 312 188 0 0 chr15 76230874 76230938 -27264036 + CT-rich Low_complexity Low_complexity 3 66 0 4 1166 1299 154 38 14 chr15 76230957 76231168 -27263806 - B3 SINE B2 0 216 1 4 1166 444 287 8 17 chr15 76234350 76234467 -27260507 - ID_B1 SINE B4 -107 117 2 4 1166 677 156 100 15 chr15 76236618 76236748 -27258226 + B1_Mur3 SINE Alu 9 149 0 4 1166 493 256 206 0 chr15 76239590 76239750 -27255224 - ORR1D2 LTR MaLR -1 369 177 4 1166 697 229 163 26 chr15 76239750 76239790 -27255184 - MT2A LTR ERVL 0 533 496 4 1166 255 61 0 0 chr15 76239790 76239823 -27255151 + (CATG)n Simple_repeat Simple_repeat 1 33 0 4 1166 697 229 163 26 chr15 76239823 76240015 -27254959 - MT2A LTR ERVL -38 495 271 4 1166 402 187 186 8 chr15 76240039 76240163 -27254811 - RLTR40 LTR ERVK -570 247 102 4 1166 499 267 43 104 chr15 76240209 76240439 -27254535 - B3 SINE B2 0 216 1 4 1166 322 293 186 8 chr15 76241353 76241477 -27253497 + RSINE1 SINE B4 3 148 -17 4 1166 369 0 0 0 chr15 76241483 76241524 -27253450 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1166 923 167 0 20 chr15 76241568 76241721 -27253253 + B1_Mur4 SINE Alu 1 150 0 4 1166 378 240 90 52 chr15 76241757 76241887 -27253087 + B3 SINE B2 1 128 -67 4 1166 363 23 0 0 chr15 76241887 76241931 -27253043 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1166 286 284 150 72 chr15 76241931 76241967 -27253007 + B2_Mm2 SINE B2 129 180 -15 4 1166 501 112 23 35 chr15 76241974 76242078 -27252896 - B1_Mus2 SINE Alu 0 147 13 4 1166 875 189 0 20 chr15 76242125 76242276 -27252698 + B1_Mur2 SINE Alu 2 149 0 4 1166 1099 81 49 6 chr15 76242281 76242443 -27252531 + B2_Mm2 SINE B2 1 169 -26 4 1166 339 184 97 97 chr15 76242535 76242649 -27252325 + PB1D10 SINE Alu 4 117 0 4 1166 615 253 32 13 chr15 76242654 76242836 -27252138 + B3 SINE B2 3 192 -6 4 1166 920 229 50 0 chr15 76242847 76243048 -27251926 - B3 SINE B2 -5 211 1 4 1166 189 0 0 0 chr15 76243483 76243504 -27251470 + (TTA)n Simple_repeat Simple_repeat 3 23 0 4 1166 318 323 10 39 chr15 76243518 76243621 -27251353 - PB1D10 SINE Alu -15 102 3 4 1166 311 208 110 40 chr15 76244895 76244995 -27249979 - ORR1D1 LTR MaLR 0 374 268 4 1166 550 208 42 2 chr15 76244995 76245141 -27249833 - ORR1D1 LTR MaLR -210 164 1 4 1166 2216 72 15 61 chr15 76245346 76245400 -27249574 - ORR1A2 LTR MaLR 0 327 287 4 1166 974 66 281 7 chr15 76245400 76245553 -27249421 - B2_Mm2 SINE B2 0 195 1 4 1166 2216 72 15 61 chr15 76245553 76245841 -27249133 - ORR1A2 LTR MaLR -41 286 1 4 1166 702 167 0 0 chr15 76245966 76246098 -27248876 + (TG)n Simple_repeat Simple_repeat 2 133 0 4 1166 405 0 0 0 chr15 76246446 76246491 -27248483 + (TTCTC)n Simple_repeat Simple_repeat 1 45 0 4 1166 458 33 0 16 chr15 76246498 76246559 -27248415 + (TTCC)n Simple_repeat Simple_repeat 2 61 0 4 1166 348 321 51 57 chr15 76246559 76246576 -27248398 - B4A SINE B4 -47 245 174 4 1166 768 161 22 0 chr15 76246576 76246713 -27248261 - B1_Mur3 SINE Alu -1 148 9 4 1166 348 321 51 57 chr15 76246713 76246734 -27248240 - B4A SINE B4 -47 173 72 4 1166 640 176 73 44 chr15 76247945 76248082 -27246892 - B1_Mur1 SINE Alu 0 149 9 4 1166 286 292 9 86 chr15 76247988 76248104 -27246870 - MT2B LTR ERVL -341 260 154 4 1166 965 216 30 0 chr15 76248120 76248319 -27246655 - B3 SINE B2 -7 209 5 4 1166 1008 73 237 7 chr15 76248467 76248619 -27246355 - B2_Mm2 SINE B2 -7 188 2 4 1166 1133 82 0 13 chr15 76248643 76248792 -27246182 - B1_Mm SINE Alu 0 147 1 4 1166 866 154 21 0 chr15 76248892 76249035 -27245939 - B1_Mm SINE Alu -1 146 1 4 1166 700 253 36 26 chr15 76249150 76249345 -27245629 - B3A SINE B2 -1 197 1 4 1166 341 240 68 90 chr15 76249361 76249494 -27245480 - B1F SINE Alu -17 132 3 4 1166 566 86 257 0 chr15 76249705 76249810 -27245164 + B1_Mur4 SINE Alu 9 140 -10 4 1166 231 36 0 0 chr15 76249837 76249865 -27245109 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 1166 204 40 0 0 chr15 76249922 76249947 -27245027 + (CAG)n Simple_repeat Simple_repeat 1 25 0 4 1166 395 264 100 0 chr15 76250135 76250275 -27244699 - RSINE1 SINE B4 -8 157 4 4 1166 566 215 116 50 chr15 76250321 76250502 -27244472 - B3A SINE B2 -5 193 1 4 1166 656 329 170 18 chr15 76251883 76251988 -27242986 - MER77 LTR ERVL -12 595 476 4 1166 264 293 100 10 chr15 76251988 76252088 -27242886 + PB1D10 SINE Alu 2 110 -7 4 1166 656 329 170 18 chr15 76252088 76252483 -27242491 - MER77 LTR ERVL -132 475 19 4 1166 348 43 0 0 chr15 76253605 76253651 -27241323 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1166 236 352 16 0 chr15 76253675 76253803 -27241171 + (TG)n Simple_repeat Simple_repeat 1 130 0 4 1166 369 324 17 6 chr15 76253827 76254004 -27240970 + (TG)n Simple_repeat Simple_repeat 1 179 0 4 1166 1595 187 50 30 chr15 76254707 76255073 -27239901 - ORR1D2 LTR MaLR 0 419 2 4 1166 985 193 67 1 chr15 76255164 76255358 -27239616 - B3 SINE B2 -3 213 9 4 1166 210 37 0 0 chr15 76255358 76255385 -27239589 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1166 1222 55 0 7 chr15 76255385 76255532 -27239442 - B1_Mus1 SINE Alu -2 146 1 4 1166 650 261 21 64 chr15 76255532 76255554 -27239420 - B3A SINE B2 -176 22 2 4 1166 279 0 0 0 chr15 76255678 76255709 -27239265 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1166 607 243 57 0 chr15 76255711 76255851 -27239123 - RSINE1 SINE B4 -16 149 2 4 1166 368 262 0 0 chr15 76255995 76256075 -27238899 - B3A SINE B2 -83 115 36 4 1166 906 37 2 11 chr15 76256091 76256233 -27238741 - B1_Mm SINE Alu 0 149 9 4 1166 269 167 0 0 chr15 76256209 76256251 -27238723 - B3A SINE B2 -154 44 3 4 1166 290 273 91 0 chr15 76256567 76256688 -27238286 + Lx6 LINE L1 7299 7430 -30 4 1166 1457 81 0 5 chr15 76256689 76256876 -27238098 - B2_Mm2 SINE B2 -7 188 3 4 1166 515 293 79 0 chr15 76256937 76257077 -27237897 - RSINE1 SINE B4 0 165 15 4 1166 261 167 0 0 chr15 76257121 76257175 -27237799 + GA-rich Low_complexity Low_complexity 4 57 0 4 1166 429 232 120 101 chr15 76257177 76257335 -27237639 - RSINE1 SINE B4 0 165 5 4 1166 195 42 0 0 chr15 76258203 76258227 -27236747 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 4 1166 705 193 57 7 chr15 76259974 76260115 -27234859 + B1_Mur3 SINE Alu 2 149 0 4 1166 283 284 36 9 chr15 76260995 76261113 -27233861 - ORR1E LTR MaLR 0 370 242 4 1166 830 124 0 0 chr15 76261207 76261336 -27233638 - URR1B DNA MER1_type -2 223 95 4 1166 1180 55 7 0 chr15 76261727 76261872 -27233102 + B1_Mm SINE Alu 2 147 0 4 1166 1161 139 71 47 chr15 76261899 76262110 -27232864 - B3 SINE B2 0 216 1 4 1166 631 202 40 0 chr15 76262121 76262245 -27232729 - B1_Mur1 SINE Alu -8 141 13 5 1166 214 258 0 16 chr15 76267375 76267438 -27227536 + GA-rich Low_complexity Low_complexity 1 62 0 5 1166 871 114 67 22 chr15 76267955 76268090 -27226884 + B1_Mus1 SINE Alu 1 141 -7 5 1166 310 265 15 0 chr15 76268179 76268247 -27226727 + PB1 SINE Alu 22 90 -37 5 1166 446 311 0 8 chr15 76268241 76268364 -27226610 + ID_B1 SINE B4 80 201 -23 5 1166 252 307 0 0 chr15 76269219 76269294 -27225680 - L1M LINE L1 -838 5335 5261 5 1166 262 345 48 7 chr15 76269604 76269750 -27225224 - L1M3 LINE L1 -393 5790 5639 5 1166 1076 185 34 10 chr15 76269768 76269975 -27224999 + B3 SINE B2 2 213 -3 5 1166 210 37 0 0 chr15 76269988 76270015 -27224959 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 5 1166 814 38 0 0 chr15 76270030 76270136 -27224838 - B1_Mm SINE Alu 0 147 42 5 1166 295 123 86 17 chr15 76270088 76270146 -27224828 - 4.5SRNA scRNA scRNA -8 86 25 5 1166 588 263 61 31 chr15 76270159 76270355 -27224619 - B3 SINE B2 0 216 15 5 1166 289 198 12 12 chr15 76270402 76270484 -27224490 + G-rich Low_complexity Low_complexity 3 84 0 5 1166 448 268 0 18 chr15 76270489 76270603 -27224371 - B3A SINE B2 -48 150 39 5 1166 242 279 103 24 chr15 76270796 76270834 -27224140 - L1M3 LINE L1 -2513 5482 5442 5 1166 612 211 186 56 chr15 76270834 76270995 -27223979 - B3A SINE B2 -16 182 1 5 1166 471 235 28 13 chr15 76270995 76271144 -27223830 - L1M3 LINE L1 -2554 5441 5299 5 1166 336 167 194 0 chr15 76271170 76271242 -27223732 - RSINE1 SINE B4 -77 88 3 5 1166 299 237 38 0 chr15 76271323 76271437 -27223537 - L1M3 LINE L1 -951 5189 5074 5 1166 261 0 0 0 chr15 76271466 76271495 -27223479 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1166 470 304 123 20 chr15 76271967 76272224 -27222750 + L1MB7 LINE L1 5648 5935 -249 5 1166 250 228 18 0 chr15 76274229 76274286 -27220688 + MIRm SINE MIR 159 216 -60 5 1166 521 271 118 16 chr15 76274575 76274764 -27220210 - B3A SINE B2 -13 203 1 5 1166 239 244 91 91 chr15 76275827 76275838 -27219136 - PB1D10 SINE Alu -5 112 14 5 1166 313 273 102 0 chr15 76275838 76275926 -27219048 - ID_B1 SINE B4 -33 191 95 5 1166 319 167 278 0 chr15 76276075 76276147 -27218827 - PB1D9 SINE Alu -16 104 13 5 1166 189 0 0 0 chr15 76279953 76279974 -27215000 + (TC)n Simple_repeat Simple_repeat 2 22 0 5 1166 1159 49 21 0 chr15 76279985 76280129 -27214845 - B1_Mus2 SINE Alu 0 147 1 5 1166 993 101 58 0 chr15 76280731 76280870 -27214104 + B1_Mus1 SINE Alu 2 148 0 5 1166 246 62 0 0 chr15 76280870 76280902 -27214072 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1167 225 0 0 0 chr15 76287443 76287468 -27207506 + (TC)n Simple_repeat Simple_repeat 1 25 0 5 1167 456 19 0 0 chr15 76287468 76287520 -27207454 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1167 192 77 0 0 chr15 76290006 76290032 -27204942 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1167 303 213 90 39 chr15 76299076 76299154 -27195820 - PB1D7 SINE Alu -25 95 14 5 1167 1242 61 0 0 chr15 76299538 76299686 -27195288 + B1_Mus1 SINE Alu 1 148 0 5 1167 497 145 12 0 chr15 76299802 76299885 -27195089 + B1_Mur2 SINE Alu 58 141 -8 5 1167 23 0 0 0 chr15 76300298 76300321 -27194653 + AT_rich Low_complexity Low_complexity 1 23 0 5 1167 303 28 0 0 chr15 76300323 76300359 -27194615 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1167 539 309 67 0 chr15 76300374 76300523 -27194451 - RSINE1 SINE B4 -4 161 3 5 1167 191 313 15 0 chr15 76300579 76300646 -27194328 + L2c LINE L2 3130 3197 -190 5 1167 224 283 0 0 chr15 76300729 76300775 -27194199 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1167 801 160 53 0 chr15 76301095 76301226 -27193748 + B1_Mus2 SINE Alu 1 138 -9 5 1167 521 180 0 10 chr15 76301348 76301449 -27193525 + B1_Mur2 SINE Alu 43 142 -7 5 1167 423 306 98 9 chr15 76301454 76301607 -27193367 + B4A SINE B4 68 231 -61 5 1167 381 202 0 45 chr15 76301609 76301697 -27193277 + PB1D9 SINE Alu 37 120 0 5 1167 565 272 36 59 chr15 76301703 76301922 -27193052 + B3 SINE B2 3 216 0 5 1167 366 23 0 0 chr15 76301963 76302006 -27192968 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 1167 949 148 194 22 chr15 76302018 76302198 -27192776 + B3 SINE B2 1 211 -5 5 1167 489 327 38 6 chr15 76302456 76302616 -27192358 + RSINE1 SINE B4 1 165 0 5 1167 1183 177 20 5 chr15 76303438 76303642 -27191332 - B3 SINE B2 -5 211 5 5 1167 441 250 64 35 chr15 76303671 76303812 -27191162 + B4 SINE B4 79 223 -69 5 1167 679 173 94 0 chr15 76303687 76303814 -27191160 + B1_Mur4 SINE Alu 11 149 -1 5 1167 1161 75 0 0 chr15 76303988 76304135 -27190839 + B1_Mus1 SINE Alu 1 147 -1 5 1167 1125 252 106 55 chr15 76305802 76306150 -27188824 + ORR1D1 LTR MaLR 1 366 -8 5 1167 538 216 18 9 chr15 76306315 76306427 -27188547 - B1_Mur4 SINE Alu -37 113 1 5 1167 248 311 46 62 chr15 76306317 76306447 -27188527 - B4A SINE B4 -92 200 73 5 1167 1008 125 89 111 chr15 76306672 76306790 -27188184 + URR1A DNA MER1_type 2 132 -94 5 1167 1236 54 0 0 chr15 76306790 76306937 -27188037 - B1_Mus1 SINE Alu 0 148 2 5 1167 1008 125 89 111 chr15 76306937 76307043 -27187931 + URR1A DNA MER1_type 133 221 -5 5 1167 209 157 39 0 chr15 76310564 76310615 -27184359 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1167 560 288 80 16 chr15 76310615 76310802 -27184172 - B4A SINE B4 -90 202 4 5 1167 315 0 0 0 chr15 76311769 76311804 -27183170 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 5 1167 345 47 0 0 chr15 76311850 76311893 -27183081 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1167 408 191 0 0 chr15 76311884 76311968 -27183006 + (TA)n Simple_repeat Simple_repeat 1 84 0 5 1167 960 234 44 0 chr15 76311968 76312173 -27182801 - B3 SINE B2 -2 214 1 5 1167 295 214 129 45 chr15 76312182 76312314 -27182660 - B1_Mur4 SINE Alu -6 144 2 5 1167 677 182 66 0 chr15 76312354 76312491 -27182483 - B1_Mur4 SINE Alu 0 150 5 5 1167 371 264 58 147 chr15 76312495 76312516 -27182458 - B2_Mm2 SINE B2 -4 191 171 5 1167 771 185 46 8 chr15 76312516 76312647 -27182327 + B1_Mur3 SINE Alu 2 137 -12 5 1167 467 264 58 147 chr15 76312647 76312816 -27182158 - B3 SINE B2 -7 209 18 5 1167 252 0 0 0 chr15 76312883 76312911 -27182063 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1167 639 265 0 0 chr15 76312920 76313056 -27181918 - RSINE1 SINE B4 -27 138 3 5 1167 397 280 9 36 chr15 76313059 76313170 -27181804 - PB1D10 SINE Alu 0 117 10 5 1167 319 272 202 0 chr15 76314507 76314665 -27180309 + L1MD LINE L1 4161 4350 -1796 5 1167 256 235 29 0 chr15 76314684 76314752 -27180222 + B3 SINE B2 2 71 -145 5 1167 453 330 98 15 chr15 76315065 76315268 -27179706 - MLT1C LTR MaLR -214 253 34 5 1167 225 0 0 0 chr15 76315277 76315302 -27179672 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1167 513 195 58 36 chr15 76315304 76315527 -27179447 - RMER17C LTR ERVK -86 281 65 5 1167 858 279 148 39 chr15 76315578 76315962 -27179012 - Lx8 LINE L1 -115 7358 6933 5 1167 486 119 298 29 chr15 76315964 76316068 -27178906 - B1_Mus1 SINE Alu -16 132 1 5 1167 1791 246 295 1 chr15 76316072 76316743 -27178231 - Lx6 LINE L1 -1 7459 6592 5 1167 2114 95 12 16 chr15 76316793 76317114 -27177860 - ORR1A4 LTR MaLR -8 321 2 5 1167 9150 144 53 10 chr15 76317115 76318640 -27176334 - Lx6 LINE L1 -1212 6248 4634 5 1167 183 42 0 0 chr15 76318640 76318664 -27176310 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 1167 9150 127 40 9 chr15 76318664 76318995 -27175979 - Lx6 LINE L1 -1244 4633 4285 5 1167 273 29 0 0 chr15 76318995 76319029 -27175945 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 5 1167 9150 127 40 9 chr15 76319029 76319067 -27175907 - Lx6 LINE L1 -1593 4284 4247 5 1167 342 0 0 0 chr15 76319070 76319108 -27175866 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 5 1167 276 199 89 0 chr15 76319118 76319187 -27175787 - PB1D9 SINE Alu -56 94 24 5 1167 261 284 54 126 chr15 76319198 76319262 -27175712 - L1M4 LINE L1 -2455 4189 4140 5 1167 867 214 35 6 chr15 76319262 76319436 -27175538 + B3A SINE B2 2 180 -18 5 1167 477 284 54 126 chr15 76319436 76319705 -27175269 - L1M4 LINE L1 -2505 4139 3880 5 1167 1305 110 0 11 chr15 76319711 76319895 -27175079 - B2_Mm2 SINE B2 -12 183 2 5 1167 791 223 0 26 chr15 76319919 76320071 -27174903 - B1_Mur2 SINE Alu 0 149 2 5 1167 364 309 139 18 chr15 76320117 76320282 -27174692 - L1M4 LINE L1 -2917 3724 3540 5 1167 659 129 147 0 chr15 76320556 76320672 -27174302 + B1_Mur4 SINE Alu 9 141 -9 5 1167 441 359 74 0 chr15 76320775 76320992 -27173982 - MER2 DNA MER2_type -88 257 25 5 1167 1104 64 133 13 chr15 76321074 76321232 -27173742 + B2_Mm2 SINE B2 5 181 -14 5 1167 702 237 39 34 chr15 76321423 76321628 -27173346 - B3 SINE B2 -2 214 9 5 1167 337 299 118 17 chr15 76322786 76323038 -27171936 - L1M4 LINE L1 -4885 1855 1471 5 1167 1083 219 43 43 chr15 76323045 76323115 -27171859 - ORR1C2 LTR MaLR -3 381 322 5 1167 1428 88 0 30 chr15 76323115 76323314 -27171660 + B2_Mm2 SINE B2 3 195 0 5 1167 1083 219 43 43 chr15 76323314 76323501 -27171473 - ORR1C2 LTR MaLR -63 321 124 5 1167 344 304 147 20 chr15 76323552 76323804 -27171170 - L1M4 LINE L1 -5177 1365 1082 5 1167 553 268 55 0 chr15 76323930 76324057 -27170917 - RSINE1 SINE B4 -30 135 2 5 1167 559 289 180 17 chr15 76324128 76324490 -27170484 - L1M4 LINE L1 -5567 975 555 5 1167 571 80 80 0 chr15 76324629 76324717 -27170257 - B1_Mus2 SINE Alu 0 147 53 5 1167 556 279 79 32 chr15 76325321 76325510 -27169464 - B3 SINE B2 -15 201 4 5 1167 3971 87 6 15 chr15 76325517 76326064 -27168910 + L1Md_F2 LINE L1 6040 6581 -1 5 1167 250 326 65 22 chr15 76331374 76331512 -27163462 - RMER12 LTR ERVK -464 858 715 5 1167 933 211 64 20 chr15 76335753 76335956 -27159018 + B3 SINE B2 1 212 -4 5 1167 976 47 293 0 chr15 76336510 76336660 -27158314 - B2_Mm2 SINE B2 -1 194 1 5 1167 420 20 0 0 chr15 76338154 76338203 -27156771 + (A)n Simple_repeat Simple_repeat 1 49 0 5 1167 296 221 0 93 chr15 76338203 76338278 -27156696 + MT2B2 LTR ERVL 172 239 -345 6 1167 686 140 44 0 chr15 76338211 76338325 -27156649 + B1_Mus2 SINE Alu 16 134 -13 6 1167 204 40 0 0 chr15 76338326 76338351 -27156623 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 6 1167 410 168 120 50 chr15 76338967 76338978 -27155996 - PB1D10 SINE Alu 0 117 107 6 1167 228 35 0 0 chr15 76338978 76339007 -27155967 + (TTGTG)n Simple_repeat Simple_repeat 4 32 0 6 1167 410 168 120 50 chr15 76339007 76339095 -27155879 - PB1D10 SINE Alu -11 106 11 6 1167 262 279 82 90 chr15 76340679 76340813 -27154161 + MT2B LTR ERVL 132 264 -337 6 1167 690 160 50 0 chr15 76340716 76340835 -27154139 + B1_Mur3 SINE Alu 12 136 -13 6 1167 977 67 30 0 chr15 76344003 76344138 -27150836 + B1_Mus2 SINE Alu 9 147 0 6 1167 978 156 10 56 chr15 76344150 76344347 -27150627 + B2_Mm2 SINE B2 2 189 -6 6 1167 288 0 0 0 chr15 76344512 76344544 -27150430 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1167 511 152 112 19 chr15 76344544 76344630 -27150344 + B2_Mm1a SINE B2 77 160 -33 6 1167 180 0 0 0 chr15 76344630 76344650 -27150324 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 6 1167 511 152 112 19 chr15 76344650 76344670 -27150304 + B2_Mm1a SINE B2 161 191 -2 6 1167 393 208 30 11 chr15 76344958 76345077 -27149897 + B1_Mus1 SINE Alu 3 126 -23 6 1167 2311 156 119 88 chr15 76345611 76346158 -27148816 + RMER2 LTR ERV1 1 564 -3 6 1167 186 103 0 0 chr15 76346717 76346746 -27148228 + (TCCG)n Simple_repeat Simple_repeat 1 29 0 6 1167 25 51 0 0 chr15 76346829 76346868 -27148106 + GC_rich Low_complexity Low_complexity 1 39 0 6 1167 207 215 24 60 chr15 76350243 76350327 -27144647 + GA-rich Low_complexity Low_complexity 3 83 0 6 1167 192 77 0 0 chr15 76350468 76350494 -27144480 + (CCCCCT)n Simple_repeat Simple_repeat 6 31 0 6 1167 446 124 30 20 chr15 76352328 76352427 -27142547 + CT-rich Low_complexity Low_complexity 4 103 0 6 1167 22 0 0 0 chr15 76352575 76352597 -27142377 + GC_rich Low_complexity Low_complexity 1 22 0 6 1167 23 33 0 0 chr15 76352848 76352878 -27142096 + GC_rich Low_complexity Low_complexity 1 30 0 6 1167 224 139 0 65 chr15 76352899 76352945 -27142029 + GA-rich Low_complexity Low_complexity 4 46 0 6 1167 239 348 37 52 chr15 76356006 76356197 -27138777 - ORR1E LTR MaLR -113 246 59 6 1167 274 345 42 35 chr15 76356187 76356331 -27138643 - MLT1A1 LTR MaLR -263 145 1 6 1167 848 233 6 11 chr15 76356407 76356589 -27138385 + B4 SINE B4 43 223 -69 6 1167 207 0 0 0 chr15 76356597 76356620 -27138354 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 6 1167 208 295 0 0 chr15 76356677 76356738 -27138236 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 1167 261 0 0 0 chr15 76356850 76356879 -27138095 + (T)n Simple_repeat Simple_repeat 1 29 0 6 1167 1196 62 0 0 chr15 76357485 76357629 -27137345 - B1_Mus1 SINE Alu -2 146 3 6 1167 288 0 0 0 chr15 76357639 76357671 -27137303 + (TTTTA)n Simple_repeat Simple_repeat 4 35 0 6 1167 527 175 12 180 chr15 76357671 76357827 -27137147 - B1_Mur4 SINE Alu -12 138 9 6 1167 609 200 17 0 chr15 76357928 76358048 -27136926 + B1_Mus1 SINE Alu 25 146 -2 6 1167 272 289 56 99 chr15 76357930 76358072 -27136902 + B4A SINE B4 111 246 -46 6 1167 1036 47 70 0 chr15 76358426 76358555 -27136419 - B1_Mm SINE Alu -9 138 1 6 1167 394 217 59 34 chr15 76358580 76358699 -27136275 + B1_Mur2 SINE Alu 27 148 -1 6 1167 253 300 168 10 chr15 76358865 76358966 -27136008 - B1F SINE Alu -32 117 1 6 1167 461 201 82 37 chr15 76358989 76359123 -27135851 - B1_Mur1 SINE Alu 0 149 10 6 1167 902 124 7 27 chr15 76359140 76359289 -27135685 - B1_Mur3 SINE Alu -2 147 2 6 1167 1363 71 55 6 chr15 76359593 76359776 -27135198 - B2_Mm2 SINE B2 -2 193 2 6 1167 237 232 18 0 chr15 76359791 76359847 -27135127 + MLT1C LTR MaLR 270 326 -141 6 1167 379 365 23 55 chr15 76360033 76360203 -27134771 + MLT1H-int LTR MaLR 290 462 -947 6 1167 600 270 101 43 chr15 76360203 76360412 -27134562 - ID_B1 SINE B4 -1 223 3 6 1167 379 365 23 55 chr15 76360412 76360461 -27134513 + MLT1H-int LTR MaLR 463 502 -907 6 1167 1227 124 11 0 chr15 76360529 76360706 -27134268 + B2_Mm1t SINE B2 1 179 -14 6 1167 423 98 313 26 chr15 76360754 76360869 -27134105 + B2_Mm2 SINE B2 48 195 0 6 1167 534 25 38 0 chr15 76360929 76361009 -27133965 + (TG)n Simple_repeat Simple_repeat 2 84 0 6 1167 415 232 34 43 chr15 76361009 76361120 -27133854 - PB1D7 SINE Alu -9 111 1 6 1167 1253 48 0 0 chr15 76361351 76361498 -27133476 + B1_Mm SINE Alu 1 147 0 6 1167 378 0 0 0 chr15 76361498 76361540 -27133434 + (A)n Simple_repeat Simple_repeat 1 42 0 6 1167 824 137 41 48 chr15 76361586 76361732 -27133242 + B1_Mus2 SINE Alu 2 146 -1 6 1167 292 281 47 103 chr15 76362043 76362150 -27132824 + ID_B1 SINE B4 104 204 -20 6 1167 207 0 0 0 chr15 76362158 76362181 -27132793 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 6 1167 874 129 28 35 chr15 76362181 76362320 -27132654 - B1_Mur4 SINE Alu -5 145 7 6 1167 814 152 23 0 chr15 76362361 76362493 -27132481 - B1_Mur4 SINE Alu -9 141 7 6 1167 381 204 159 37 chr15 76362987 76363094 -27131880 - B3A SINE B2 -78 120 1 6 1167 189 0 0 0 chr15 76364757 76364778 -27130196 + (GGGTG)n Simple_repeat Simple_repeat 3 23 0 6 1167 297 0 0 0 chr15 76365689 76365722 -27129252 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1167 498 255 72 7 chr15 76365800 76365938 -27129036 + B1F SINE Alu 1 147 -2 6 1167 1457 70 5 21 chr15 76365977 76366168 -27128806 + B2_Mm1t SINE B2 1 188 -5 6 1167 231 61 0 0 chr15 76369735 76369768 -27125206 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 6 1167 796 228 6 2 chr15 76372234 76372424 -27122550 - B3 SINE B2 -5 193 1 6 1167 201 79 0 116 chr15 76372432 76372475 -27122499 + T-rich Low_complexity Low_complexity 1 38 0 6 1167 738 30 20 0 chr15 76373875 76373975 -27120999 - BC1_Mm scRNA scRNA -50 102 1 6 1167 221 288 30 0 chr15 76374329 76374395 -27120579 + CT-rich Low_complexity Low_complexity 1 68 0 6 1167 565 247 190 46 chr15 76374396 76374591 -27120383 - ID_B1 SINE B4 -1 223 1 6 1167 1201 68 0 0 chr15 76374618 76374766 -27120208 - B1_Mus1 SINE Alu 0 148 1 6 1167 491 185 12 0 chr15 76374809 76374890 -27120084 + ID4_ SINE ID 2 83 0 6 1167 410 234 69 15 chr15 76374923 76375053 -27119921 + L1MB3 LINE L1 5989 6125 -58 6 1167 531 217 40 40 chr15 76375061 76375186 -27119788 + B1_Mur2 SINE Alu 24 148 -1 6 1167 723 106 0 0 chr15 76375219 76375323 -27119651 + B2_Mm2 SINE B2 3 106 -89 6 1167 207 0 0 0 chr15 76375323 76375346 -27119628 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1167 479 190 29 78 chr15 76375417 76375569 -27119405 - PB1D9 SINE Alu -2 147 10 6 1167 1042 110 14 0 chr15 76375778 76375924 -27119050 + B1_Mus1 SINE Alu 1 148 0 6 1167 565 200 11 134 chr15 76376538 76376717 -27118257 + Lx9 LINE L1 6957 7113 -531 6 1167 328 266 16 0 chr15 76376717 76376804 -27118170 - B3 SINE B2 -88 105 17 6 1167 917 103 15 0 chr15 76376911 76377047 -27117927 + B1_Mus1 SINE Alu 2 139 -9 6 1167 689 83 156 0 chr15 76377125 76377234 -27117740 + B2_Mm2 SINE B2 1 126 -69 6 1167 252 128 0 0 chr15 76377315 76377354 -27117620 + B2_Mm1t SINE B2 129 167 -26 6 1167 35 0 0 0 chr15 76377355 76377390 -27117584 + AT_rich Low_complexity Low_complexity 1 35 0 6 1167 980 60 105 0 chr15 76377391 76377524 -27117450 - B1_Mus2 SINE Alu 0 147 1 6 1167 562 60 0 0 chr15 76377551 76377634 -27117340 - L1Md_F2 LINE L1 0 6582 6500 6 1167 521 259 9 0 chr15 76377641 76377757 -27117217 - PB1D10 SINE Alu 0 117 1 6 1167 1422 225 163 3 chr15 76377992 76378353 -27116621 + MTD LTR MaLR 1 419 0 6 1167 409 225 0 0 chr15 76378369 76378449 -27116525 + RSINE1 SINE B4 6 85 -80 6 1167 225 268 0 35 chr15 76378507 76378519 -27116455 + B4 SINE B4 81 135 -156 6 1167 254 200 0 0 chr15 76378519 76378564 -27116410 + B1_Mus2 SINE Alu 6 50 -97 6 1167 577 277 58 3 chr15 76379009 76379167 -27115807 - ID_B1 SINE B4 -44 248 82 6 1167 243 351 94 29 chr15 76379036 76379206 -27115768 + YREP_Mm Unknown Unknown 182 362 -1450 6 1167 1106 130 0 0 chr15 76379216 76379385 -27115589 + B2_Mm2 SINE B2 2 170 -25 6 1167 278 281 0 111 chr15 76380207 76380315 -27114659 + B4A SINE B4 77 172 -120 6 1167 349 233 0 4 chr15 76380246 76380323 -27114651 + B1F2 SINE Alu 19 93 -54 6 1167 300 332 58 29 chr15 76380432 76380640 -27114334 - MER52-int LTR ERV1 -1221 5870 5657 6 1167 469 194 0 39 chr15 76380742 76380844 -27114130 + B3 SINE B2 24 121 -95 6 1167 186 71 0 0 chr15 76380846 76380874 -27114100 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 1167 733 21 0 10 chr15 76380874 76380970 -27114004 - B1_Mm SINE Alu -13 134 40 6 1167 324 270 0 0 chr15 76380967 76381056 -27113918 + B3 SINE B2 126 214 -2 6 1167 1062 58 50 7 chr15 76381084 76381224 -27113750 + B1_Mus2 SINE Alu 2 147 0 6 1167 494 243 9 18 chr15 76381254 76381367 -27113607 + RSINE1 SINE B4 3 114 -51 6 1167 279 133 0 0 chr15 76381393 76381438 -27113536 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 6 1167 362 141 114 13 chr15 76381438 76381517 -27113457 + PB1 SINE Alu 41 127 0 6 1167 1088 36 0 0 chr15 76382360 76382500 -27112474 - B1_Mus1 SINE Alu 0 148 9 6 1167 243 353 78 10 chr15 76382805 76382908 -27112066 + B3A SINE B2 5 114 -84 6 1167 277 173 19 0 chr15 76383434 76383486 -27111488 + B1_Mur4 SINE Alu 98 150 0 7 1167 539 202 0 10 chr15 76383554 76383654 -27111320 - PB1D9 SINE Alu -3 117 19 7 1167 705 189 50 50 chr15 76383679 76383818 -27111156 - B1_Mur4 SINE Alu -7 143 5 7 1167 1418 53 21 26 chr15 76383836 76384030 -27110944 - B2_Mm2 SINE B2 -1 194 2 7 1167 329 305 84 22 chr15 76384035 76384180 -27110794 - B3 SINE B2 0 198 54 7 1167 25 65 0 0 chr15 76384267 76384313 -27110661 + AT_rich Low_complexity Low_complexity 1 46 0 7 1167 650 277 74 0 chr15 76384333 76384481 -27110493 - RSINE1 SINE B4 -5 160 2 7 1167 199 0 65 0 chr15 76384487 76384518 -27110456 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 7 1167 1208 154 11 0 chr15 76384553 76384741 -27110233 + B2_Mm1t SINE B2 1 190 -3 7 1167 1247 48 0 0 chr15 76384741 76384887 -27110087 + B1_Mus2 SINE Alu 1 147 0 7 1167 693 78 122 0 chr15 76385721 76385836 -27109138 + B1_Mus1 SINE Alu 20 148 0 7 1167 273 29 0 0 chr15 76385847 76385881 -27109093 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 7 1167 310 228 12 37 chr15 76386507 76386589 -27108385 + RSINE1 SINE B4 65 144 -21 7 1167 1351 69 36 21 chr15 76386801 76386993 -27107981 - B2_Mm2 SINE B2 0 195 1 7 1167 528 210 13 50 chr15 76387143 76387288 -27107686 + B1_Mur1 SINE Alu 2 144 -5 7 1167 261 329 75 82 chr15 76387466 76387488 -27107486 + B4A SINE B4 70 226 -65 7 1167 825 140 15 0 chr15 76387488 76387624 -27107350 + B1_Mus2 SINE Alu 10 147 0 7 1167 1388 87 0 49 chr15 76387628 76387833 -27107141 + B2_Mm2 SINE B2 1 195 0 7 1167 876 244 44 19 chr15 76387866 76388071 -27106903 + B3 SINE B2 2 211 -5 7 1167 966 177 126 0 chr15 76388426 76388624 -27106350 + RLTR19 LTR ERVK 10 232 -267 7 1167 1325 81 43 5 chr15 76388627 76388790 -27106184 + B2_Mm2 SINE B2 1 162 -33 7 1167 180 0 0 0 chr15 76388790 76388810 -27106164 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 7 1167 1325 81 43 5 chr15 76388810 76388833 -27106141 + B2_Mm2 SINE B2 163 193 -2 7 1167 1119 95 0 0 chr15 76388834 76388981 -27105993 + B1_Mus1 SINE Alu 2 148 0 7 1167 194 82 15 76 chr15 76388982 76389048 -27105926 + A-rich Low_complexity Low_complexity 2 63 0 7 1167 1238 212 3 58 chr15 76389051 76389346 -27105628 + RLTR19 LTR ERVK 221 499 0 7 1167 5763 46 65 0 chr15 76390246 76390943 -27104031 - RLTR4_Mm LTR ERV1 0 742 1 7 1167 30685 12 3 0 chr15 76390943 76394467 -27100507 - RLTR4_MM-int LTR ERV1 0 7601 4068 7 1167 19968 14 0 2 chr15 76394441 76396735 -27098239 - RLTR4_MM-int LTR ERV1 -5310 2291 1 7 1167 5763 46 65 0 chr15 76396735 76397432 -27097542 - RLTR4_Mm LTR ERV1 0 742 1 7 1167 180 0 0 0 chr15 76397432 76397452 -27097522 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 7 1167 3993 115 168 92 chr15 76397468 76397832 -27097142 + RLTR25B LTR ERVK 30 437 -591 7 1167 1458 65 38 0 chr15 76397832 76398017 -27096957 + B2_Mm1a SINE B2 1 192 -1 7 1167 3993 115 168 92 chr15 76398017 76398580 -27096394 + RLTR25B LTR ERVK 438 1028 0 7 1167 503 244 87 0 chr15 76398580 76398686 -27096288 - B1_Mur4 SINE Alu -32 118 3 7 1167 1584 179 94 70 chr15 76398801 76398853 -27096121 + MTC LTR MaLR 29 81 -340 7 1167 1145 88 0 0 chr15 76398853 76399001 -27095973 + B1_Mus1 SINE Alu 1 148 0 7 1167 1584 179 94 70 chr15 76399001 76399113 -27095861 + MTC LTR MaLR 82 170 -251 7 1167 3584 116 189 23 chr15 76399113 76399759 -27095215 + RMER6A LTR ERVK 1 753 -3 7 1167 1122 82 0 7 chr15 76399759 76399907 -27095067 + B1_Mus1 SINE Alu 1 147 -1 7 1167 1584 179 94 70 chr15 76399907 76400124 -27094850 + MTC LTR MaLR 171 420 -1 7 1167 1388 77 28 0 chr15 76400134 76400315 -27094659 - B2_Mm1a SINE B2 -6 187 2 7 1167 1096 184 50 0 chr15 76400347 76400548 -27094426 - B3 SINE B2 -5 211 1 7 1167 558 261 7 7 chr15 76400553 76400692 -27094282 - B1_Mur1 SINE Alu 0 149 11 7 1167 513 81 0 0 chr15 76400708 76400782 -27094192 - L1Md_F2 LINE L1 -8 6574 6501 7 1167 207 0 0 0 chr15 76400786 76400809 -27094165 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 7 1167 1285 38 0 0 chr15 76400809 76400969 -27094005 - B2_Mm1t SINE B2 -33 160 1 7 1167 957 122 66 50 chr15 76401005 76401163 -27093811 + B2_Mm2 SINE B2 1 163 -32 7 1167 333 0 0 0 chr15 76401163 76401200 -27093774 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1167 957 122 66 50 chr15 76401200 76401222 -27093752 + B2_Mm2 SINE B2 164 184 -11 7 1167 1586 58 0 0 chr15 76401290 76401480 -27093494 + B2_Mm1a SINE B2 2 191 -2 7 1167 1194 58 0 0 chr15 76401766 76401905 -27093069 - B1_Mm SINE Alu -8 139 1 7 1167 510 250 89 99 chr15 76401944 76402135 -27092839 + B3A SINE B2 5 193 -5 7 1167 917 130 257 34 chr15 76402142 76402317 -27092657 + B3 SINE B2 1 214 -2 7 1167 466 299 2 2 chr15 76402324 76402468 -27092506 + B1_Mur2 SINE Alu 1 144 -5 7 1167 207 0 0 0 chr15 76403022 76403045 -27091929 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1167 558 43 0 0 chr15 76403045 76403113 -27091861 + (GA)n Simple_repeat Simple_repeat 2 70 0 7 1167 606 63 0 0 chr15 76403901 76403980 -27090994 + (TCC)n Simple_repeat Simple_repeat 2 80 0 7 1167 244 350 29 10 chr15 76403984 76404088 -27090886 - RMER15 LTR ERVL -65 510 405 7 1167 401 0 20 0 chr15 76404128 76404177 -27090797 + (TTTTG)n Simple_repeat Simple_repeat 1 50 0 7 1167 959 57 98 0 chr15 76404177 76404300 -27090674 - B1_Mus1 SINE Alu -13 135 1 7 1167 210 37 0 0 chr15 76406191 76406218 -27088756 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 7 1167 198 0 0 0 chr15 76407588 76407610 -27087364 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 7 1167 577 137 152 64 chr15 76407610 76407735 -27087239 - B1_Mus1 SINE Alu -12 136 1 7 1167 756 122 0 0 chr15 76407826 76407941 -27087033 - B1_Mur4 SINE Alu -31 119 5 7 1167 1351 89 21 16 chr15 76408314 76408328 -27086646 - B2_Mm2 SINE B2 0 195 182 7 1167 1218 61 0 0 chr15 76408328 76408475 -27086499 - B1_Mus1 SINE Alu 0 148 2 7 1167 1351 89 21 16 chr15 76408475 76408653 -27086321 - B2_Mm2 SINE B2 -14 181 3 7 1167 275 210 136 29 chr15 76408717 76408732 -27086242 + MT2B LTR ERVL 167 272 -328 7 1167 376 139 202 0 chr15 76408732 76408811 -27086163 + B1_Mur4 SINE Alu 32 126 -23 7 1167 186 43 0 0 chr15 76408812 76408835 -27086139 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 7 1167 243 0 0 0 chr15 76409167 76409194 -27085780 + (CACCC)n Simple_repeat Simple_repeat 3 29 0 7 1167 807 141 20 34 chr15 76410695 76410842 -27084132 + B1_Mur4 SINE Alu 5 149 -1 7 1167 348 163 19 48 chr15 76410842 76410881 -27084093 + A-rich Low_complexity Low_complexity 1 36 0 7 1167 1404 80 27 0 chr15 76410881 76411041 -27083933 + B2_Mm1a SINE B2 1 160 -33 7 1167 180 0 0 0 chr15 76411041 76411061 -27083913 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 7 1167 1404 80 27 0 chr15 76411061 76411088 -27083886 + B2_Mm1a SINE B2 161 192 -1 7 1167 1285 34 0 0 chr15 76411093 76411240 -27083734 + B1_Mus2 SINE Alu 1 147 0 7 1167 348 163 19 48 chr15 76411240 76411297 -27083677 + A-rich Low_complexity Low_complexity 42 99 0 7 1167 1536 24 0 0 chr15 76411588 76411794 -27083180 + (TTCC)n Simple_repeat Simple_repeat 1 206 0 7 1167 680 96 30 46 chr15 76411794 76411925 -27083049 - Lx LINE L1 -9 6645 6517 7 1167 235 163 47 0 chr15 76412109 76412152 -27082822 + B1_Mur2 SINE Alu 99 143 -6 7 1167 411 244 8 52 chr15 76412385 76412519 -27082455 - B1F SINE Alu 0 149 22 7 1167 652 160 0 0 chr15 76412896 76413002 -27081972 - B2_Mm2 SINE B2 -88 107 2 7 1167 506 149 185 9 chr15 76413026 76413134 -27081840 - B1_Mur1 SINE Alu -7 142 16 7 1167 538 230 119 60 chr15 76413326 76413511 -27081463 + B3A SINE B2 2 197 -1 7 1167 328 251 171 35 chr15 76413534 76413692 -27081282 + B3A SINE B2 1 208 -8 7 1167 869 214 92 53 chr15 76413721 76413928 -27081046 + B3 SINE B2 2 216 0 7 1167 721 217 35 28 chr15 76413948 76414090 -27080884 + B1_Mus1 SINE Alu 1 143 -5 7 1167 183 129 0 0 chr15 76414091 76414122 -27080852 + (GA)n Simple_repeat Simple_repeat 2 32 0 7 145 245 270 18 99 chr15 76414877 76414988 -27079986 + PB1D9 SINE Alu 14 115 -5 7 1168 593 200 36 157 chr15 76415173 76415288 -27079686 - B1_Mur2 SINE Alu 0 149 55 7 1168 1219 55 0 0 chr15 76415288 76415434 -27079540 - B1_Mus1 SINE Alu -1 147 2 7 1168 593 200 36 157 chr15 76415434 76415484 -27079490 - B1_Mur2 SINE Alu -95 54 4 7 1168 213 174 43 0 chr15 76415494 76415540 -27079434 + (TTTG)n Simple_repeat Simple_repeat 4 51 0 7 1168 633 216 74 23 chr15 76415619 76415794 -27079180 - B3A SINE B2 -11 187 4 7 1168 1361 94 10 16 chr15 76415808 76416002 -27078972 - B2_Mm2 SINE B2 -1 194 2 7 1168 627 222 0 0 chr15 76416020 76416137 -27078837 + B1_Mur1 SINE Alu 19 135 -14 7 1168 930 128 15 8 chr15 76416222 76416356 -27078618 + B1_Mur3 SINE Alu 2 136 -13 7 1168 1146 59 0 0 chr15 76416407 76416542 -27078432 - B1_Mus2 SINE Alu -10 137 3 7 1168 758 216 92 26 chr15 76416580 76416775 -27078199 - B3 SINE B2 -8 208 1 7 1168 719 182 34 27 chr15 76416781 76416928 -27078046 - B1_Mur1 SINE Alu 0 149 2 7 1168 315 191 0 0 chr15 76417084 76417152 -27077822 + (TG)n Simple_repeat Simple_repeat 1 68 0 7 1168 1276 286 71 26 chr15 76417262 76417427 -27077547 - Lx8 LINE L1 -333 7140 6957 7 1168 399 21 0 0 chr15 76417427 76417475 -27077499 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1168 1276 286 71 26 chr15 76417475 76417733 -27077241 - Lx8 LINE L1 -517 6956 6699 7 1168 1246 41 0 0 chr15 76418501 76418647 -27076327 + B1_Mus2 SINE Alu 2 147 0 7 1168 240 35 0 0 chr15 76418647 76418676 -27076298 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1168 614 115 0 0 chr15 76418891 76418987 -27075987 - B1_Mus2 SINE Alu -43 104 9 7 1168 359 240 222 40 chr15 76420859 76420985 -27073989 - B1_Mur1 SINE Alu 0 149 1 7 1168 717 187 57 7 chr15 76421135 76421275 -27073699 + B1_Mur1 SINE Alu 2 148 -1 7 1168 269 180 0 0 chr15 76421462 76421512 -27073462 - PB1D9 SINE Alu -36 84 35 7 1168 878 143 56 14 chr15 76421835 76421977 -27072997 - B1_Mur3 SINE Alu 0 149 2 7 1168 317 263 66 0 chr15 76422083 76422220 -27072754 - L1MC4 LINE L1 -870 7172 7027 8 1168 393 290 71 65 chr15 76423162 76423317 -27071657 - RSINE1 SINE B4 -7 158 3 8 1168 236 30 30 0 chr15 76427577 76427610 -27067364 + (GGGGA)n Simple_repeat Simple_repeat 1 34 0 8 1168 26 0 0 0 chr15 76427818 76427844 -27067130 + GC_rich Low_complexity Low_complexity 1 26 0 8 1168 332 284 78 12 chr15 76434504 76434607 -27060367 + PB1D10 SINE Alu 9 115 -2 8 1168 697 156 8 8 chr15 76435249 76435372 -27059602 + B1_Mur4 SINE Alu 27 149 -1 8 1168 395 261 26 84 chr15 76435397 76435552 -27059422 + B3A SINE B2 53 198 0 8 1168 614 142 182 168 chr15 76435569 76435669 -27059305 + B3 SINE B2 3 99 -117 8 1168 1197 61 0 7 chr15 76435669 76435818 -27059156 + B1_Mus1 SINE Alu 1 148 0 8 1168 614 142 182 168 chr15 76435818 76435920 -27059054 + B3 SINE B2 100 208 -8 8 1168 411 316 33 2 chr15 76435947 76436124 -27058850 + B3 SINE B2 1 185 -10 8 1168 206 345 0 11 chr15 76436358 76436446 -27058528 + L2 LINE L2 2466 2552 -867 8 1168 229 195 0 0 chr15 76436884 76436925 -27058049 + B3A SINE B2 16 56 -142 8 1168 319 223 119 111 chr15 76437064 76437190 -27057784 - B1_Mur1 SINE Alu 0 149 23 8 1168 1064 86 29 0 chr15 76438159 76438299 -27056675 + B1_Mus2 SINE Alu 4 147 0 8 1168 201 74 0 0 chr15 76438300 76438327 -27056647 + (GAAA)n Simple_repeat Simple_repeat 3 29 0 8 1168 1700 67 0 35 chr15 76438545 76438777 -27056197 + L1Md_F2 LINE L1 6359 6582 0 8 1168 1018 109 0 52 chr15 76438803 76438958 -27056016 + B1_Mus1 SINE Alu 2 148 0 8 1168 480 173 150 26 chr15 76439009 76439122 -27055852 - B1_Mur2 SINE Alu 0 149 23 8 1168 26 30 0 0 chr15 76439142 76439175 -27055799 + AT_rich Low_complexity Low_complexity 1 33 0 8 1168 409 124 19 0 chr15 76439181 76439252 -27055722 - B2_Mm2 SINE B2 -76 122 46 8 1168 1115 142 11 11 chr15 76439265 76439443 -27055531 - B2_Mm1t SINE B2 -14 179 2 8 1168 235 56 0 0 chr15 76439472 76439508 -27055466 + B1_Mur4 SINE Alu 114 149 -1 8 1168 1571 32 0 64 chr15 76439543 76439746 -27055228 + B2_Mm1a SINE B2 2 191 -2 8 1168 1196 64 0 0 chr15 76439770 76439911 -27055063 + B1_Mm SINE Alu 1 141 -6 8 1168 279 0 0 0 chr15 76439915 76439946 -27055028 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 8 1168 1461 59 21 0 chr15 76440097 76440284 -27054690 + B2_Mm1t SINE B2 2 192 -1 8 1168 200 125 0 24 chr15 76440391 76440432 -27054542 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 8 1168 276 202 179 0 chr15 76440432 76440516 -27054458 - B1_Mus2 SINE Alu 0 147 49 8 1168 1265 105 6 11 chr15 76440523 76440706 -27054268 - B2_Mm2 SINE B2 -13 182 1 8 1168 383 228 28 234 chr15 76440707 76440925 -27054049 + RMER15 LTR ERVL 364 536 -39 8 1168 288 341 39 31 chr15 76440921 76441027 -27053947 + B1_Mur1 SINE Alu 18 126 -23 8 1168 476 205 171 0 chr15 76441027 76441144 -27053830 + B1_Mur4 SINE Alu 1 137 -13 8 1168 210 37 0 0 chr15 76441146 76441173 -27053801 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 1168 288 341 39 31 chr15 76441173 76441193 -27053781 + B1_Mur1 SINE Alu 127 146 -3 8 1168 628 175 74 81 chr15 76441487 76441636 -27053338 + B1_Mur4 SINE Alu 3 150 0 8 1168 638 252 7 20 chr15 76441766 76441916 -27053058 - B1F2 SINE Alu 0 149 2 8 1168 1318 78 89 0 chr15 76442180 76442359 -27052615 - B2_Mm2 SINE B2 0 195 1 8 1168 356 304 26 9 chr15 76442377 76442493 -27052481 + MLT1B LTR MaLR 273 390 0 8 1168 198 0 0 98 chr15 76445352 76445393 -27049581 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 8 1168 510 61 0 0 chr15 76445769 76445835 -27049139 + (TC)n Simple_repeat Simple_repeat 1 66 0 8 1168 1101 59 7 0 chr15 76445835 76445970 -27049004 - B1_Mus1 SINE Alu -12 136 1 8 1168 499 15 29 0 chr15 76448741 76448809 -27046165 + (TG)n Simple_repeat Simple_repeat 2 71 0 8 1168 207 0 0 0 chr15 76448913 76448936 -27046038 + (A)n Simple_repeat Simple_repeat 1 23 0 8 1168 489 242 109 36 chr15 76449192 76449329 -27045645 + B1_Mur1 SINE Alu 3 149 0 8 1168 441 250 65 0 chr15 76449355 76449463 -27045511 + PB1D10 SINE Alu 3 117 0 8 1168 480 221 53 0 chr15 76449463 76449558 -27045416 + B3 SINE B2 1 100 -116 8 1168 795 56 0 0 chr15 76449559 76449666 -27045308 + B1_Mus2 SINE Alu 41 147 0 8 1168 442 241 17 43 chr15 76449666 76449783 -27045191 + B3 SINE B2 91 204 -12 8 1168 423 138 0 0 chr15 76449783 76449870 -27045104 + (T)n Simple_repeat Simple_repeat 1 87 0 8 1168 1107 55 7 52 chr15 76449871 76450024 -27044950 - B1_Mus1 SINE Alu 0 148 3 8 1168 252 207 16 49 chr15 76450064 76450125 -27044849 + ID2 SINE ID 2 60 -23 8 1168 2467 212 71 77 chr15 76450352 76450727 -27044247 + RLTR21 LTR ERVK 5 373 -1199 8 1168 1126 89 7 0 chr15 76450727 76450873 -27044101 + B1_Mus1 SINE Alu 1 147 -1 8 1168 2467 212 71 77 chr15 76450873 76451203 -27043771 + RLTR21 LTR ERVK 374 705 -867 8 1168 314 73 364 30 chr15 76451167 76451266 -27043708 - B2_Mm2 SINE B2 0 195 64 8 1168 1025 111 62 0 chr15 76451309 76451471 -27043503 - B2_Mm2 SINE B2 -22 173 2 8 1168 2083 199 71 93 chr15 76451475 76451768 -27043206 + RLTR21 LTR ERVK 665 944 -628 8 1168 396 0 0 0 chr15 76451768 76451812 -27043162 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 1168 2083 199 71 93 chr15 76451812 76452027 -27042947 + RLTR21 LTR ERVK 945 1200 -372 8 1168 222 37 0 0 chr15 76452027 76452054 -27042920 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 1168 2083 224 70 122 chr15 76452054 76452315 -27042659 + RLTR21 LTR ERVK 1176 1401 -3 8 1168 312 27 0 0 chr15 76452434 76452471 -27042503 + (TA)n Simple_repeat Simple_repeat 1 37 0 8 1168 261 0 0 0 chr15 76452471 76452499 -27042475 + (GA)n Simple_repeat Simple_repeat 2 30 0 8 1168 234 260 0 0 chr15 76454812 76454862 -27040112 + (TG)n Simple_repeat Simple_repeat 1 50 0 8 1168 403 237 34 26 chr15 76457517 76457634 -27037340 + PB1D9 SINE Alu 2 119 -1 8 1168 860 172 20 14 chr15 76458034 76458181 -27036793 + B1_Mur4 SINE Alu 1 148 -2 8 1168 1191 75 7 0 chr15 76458181 76458327 -27036647 + B1_Mus1 SINE Alu 1 148 0 8 1168 1135 65 0 38 chr15 76458374 76458534 -27036440 + B2_Mm2 SINE B2 1 154 -41 8 1168 562 136 191 0 chr15 76458536 76458646 -27036328 + B1_Mus2 SINE Alu 10 140 -7 8 1168 306 0 0 0 chr15 76458647 76458681 -27036293 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 8 1168 581 262 91 35 chr15 76458686 76458884 -27036090 - B3 SINE B2 -7 209 1 8 1168 306 106 0 0 chr15 76458893 76458940 -27036034 + (TTA)n Simple_repeat Simple_repeat 2 48 0 8 1168 944 151 15 80 chr15 76461924 76462125 -27032849 + B2_Mm2 SINE B2 2 189 -6 8 1168 750 123 18 0 chr15 76462681 76462795 -27032179 - B1_Mur4 SINE Alu -13 137 22 8 1168 252 373 51 51 chr15 76462710 76462868 -27032106 - B4A SINE B4 -98 194 37 8 1168 259 387 28 51 chr15 76463901 76464116 -27030858 + MER50B LTR ERV1 341 550 -147 8 1168 1190 68 0 0 chr15 76466081 76466227 -27028747 - B1_Mus2 SINE Alu 0 147 2 8 1168 243 146 0 0 chr15 76466590 76466631 -27028343 + (TTC)n Simple_repeat Simple_repeat 3 43 0 8 1168 256 191 0 51 chr15 76466806 76466874 -27028100 + PB1 SINE Alu 53 125 -2 8 1168 243 0 0 0 chr15 76466885 76466912 -27028062 + (TAGG)n Simple_repeat Simple_repeat 3 29 0 8 1168 180 0 0 0 chr15 76470639 76470659 -27024315 + (T)n Simple_repeat Simple_repeat 1 20 0 8 1168 675 180 55 48 chr15 76470665 76470811 -27024163 + B1_Mus2 SINE Alu 1 147 0 8 1168 1188 105 55 6 chr15 76470832 76471014 -27023960 + B2_Mm1t SINE B2 1 191 -2 8 1168 596 238 91 32 chr15 76471036 76471223 -27023751 - B3A SINE B2 0 198 1 8 1168 621 144 58 64 chr15 76471279 76471294 -27023680 - B2_Mm2 SINE B2 -3 192 179 8 1168 243 0 0 0 chr15 76471294 76471321 -27023653 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 8 1168 1138 84 0 0 chr15 76471325 76471467 -27023507 - B1_Mus1 SINE Alu -5 143 2 8 1168 621 144 58 64 chr15 76471467 76471602 -27023372 - B2_Mm2 SINE B2 -17 178 42 8 1168 311 299 0 30 chr15 76471629 76471645 -27023329 - RSINE1 SINE B4 -66 99 3 8 1168 627 60 0 0 chr15 76471645 76471729 -27023245 - B2_Mm2 SINE B2 -110 85 2 8 1168 335 209 128 0 chr15 76471791 76471877 -27023097 - PB1D9 SINE Alu -15 105 9 8 1168 259 179 81 95 chr15 76471814 76471888 -27023086 - MT2B2 LTR ERVL -356 228 156 8 1168 462 193 45 0 chr15 76471903 76471991 -27022983 - B3 SINE B2 -3 213 122 8 1168 1024 117 206 6 chr15 76472042 76472222 -27022752 + B3 SINE B2 1 216 0 8 1168 225 0 0 0 chr15 76472236 76472261 -27022713 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 8 1168 328 303 26 60 chr15 76472269 76472385 -27022589 - B3A SINE B2 -86 112 1 8 1168 453 302 69 8 chr15 76472896 76473026 -27021948 - ID_B1 SINE B4 0 224 87 8 1168 1239 54 0 0 chr15 76473084 76473231 -27021743 - B1_Mus1 SINE Alu 0 148 2 8 1168 1226 62 0 0 chr15 76473630 76473775 -27021199 + B1_Mus2 SINE Alu 3 147 0 8 1168 345 271 68 106 chr15 76480933 76481094 -27013880 + ID_B1 SINE B4 70 224 0 8 1168 442 232 0 81 chr15 76480959 76481095 -27013879 + B1F SINE Alu 24 148 -1 8 1168 566 256 250 0 chr15 76483170 76483342 -27011632 + B3 SINE B2 1 215 -1 8 1168 221 83 28 0 chr15 76483342 76483378 -27011596 + (GGA)n Simple_repeat Simple_repeat 1 37 0 8 1168 27 0 0 0 chr15 76486759 76486786 -27008188 + GC_rich Low_complexity Low_complexity 1 27 0 8 1168 180 182 0 0 chr15 76486872 76486916 -27008058 + (CCG)n Simple_repeat Simple_repeat 2 45 0 8 1168 35 116 0 0 chr15 76487002 76487191 -27007783 + GC_rich Low_complexity Low_complexity 1 189 0 8 1168 185 167 0 85 chr15 76488210 76488269 -27006705 + T-rich Low_complexity Low_complexity 1 54 0 8 1168 835 153 20 34 chr15 76488270 76488419 -27006555 - B1_Mur2 SINE Alu -1 148 2 9 1168 1235 54 0 0 chr15 76489473 76489620 -27005354 + B1_Mm SINE Alu 1 147 0 9 1168 711 188 30 0 chr15 76490354 76490487 -27004487 - B1_Mur2 SINE Alu -1 148 12 9 1168 401 327 0 55 chr15 76490487 76490519 -27004455 - ID_B1 SINE B4 -3 221 66 9 1168 354 45 0 0 chr15 76493687 76493731 -27001243 + (TTTTC)n Simple_repeat Simple_repeat 2 45 0 9 1168 890 43 179 0 chr15 76493731 76493848 -27001126 - B1_Mus1 SINE Alu -10 138 1 9 1168 266 164 18 0 chr15 76493850 76493905 -27001069 + CT-rich Low_complexity Low_complexity 2 57 0 9 1168 492 207 0 110 chr15 76493906 76494042 -27000932 - ID_B1 SINE B4 0 224 104 9 1168 835 73 19 8 chr15 76493929 76494053 -27000921 - B1_Mus1 SINE Alu -10 140 18 9 1168 1237 121 6 0 chr15 76494053 76494227 -27000747 + B2_Mm1a SINE B2 1 175 -18 9 1168 186 43 0 0 chr15 76494228 76494251 -27000723 + (CAAAA)n Simple_repeat Simple_repeat 4 26 0 9 1168 817 96 27 87 chr15 76494251 76494273 -27000701 - B1_Mur4 SINE Alu -133 17 1 9 1168 1468 75 0 5 chr15 76495718 76495905 -26999069 - B2_Mm2 SINE B2 -8 187 2 9 1168 1341 14 0 0 chr15 76495934 76496081 -26998893 - B1_Mm SINE Alu 0 147 1 9 1168 1538 58 16 0 chr15 76496112 76496300 -26998674 - B2_Mm1a SINE B2 -1 192 2 9 1168 1251 48 0 0 chr15 76500697 76500843 -26994131 + B1_Mus1 SINE Alu 2 147 -1 1 1168 258 125 0 0 chr15 76500844 76500892 -26994082 + (A)n Simple_repeat Simple_repeat 1 48 0 2 1168 21 0 0 0 chr15 76501873 76501894 -26993080 + AT_rich Low_complexity Low_complexity 1 21 0 3 1168 203 56 56 0 chr15 76502382 76502418 -26992556 + (TTTTTG)n Simple_repeat Simple_repeat 6 43 0 4 1168 505 302 17 82 chr15 76503235 76503466 -26991508 - B3 SINE B2 0 216 1 5 1168 520 238 0 0 chr15 76503471 76503572 -26991402 - B1F SINE Alu -1 148 48 6 1168 324 120 0 0 chr15 76503753 76503803 -26991171 + (T)n Simple_repeat Simple_repeat 1 50 0 7 1168 1171 82 0 0 chr15 76503803 76503949 -26991025 - B1_Mus2 SINE Alu 0 147 2 8 1168 1159 93 111 0 chr15 76503953 76504125 -26990849 - B2_Mm1t SINE B2 0 193 3 9 1168 314 321 0 0 chr15 76504125 76504209 -26990765 - B1_Mus1 SINE Alu -62 86 3 1 1168 704 228 44 69 chr15 76504249 76504452 -26990522 - B3A SINE B2 0 198 1 1 1168 707 207 67 0 chr15 76504482 76504617 -26990357 - B1_Mur1 SINE Alu -5 144 1 1 1168 714 193 82 0 chr15 76504671 76504806 -26990168 + B1_Mur4 SINE Alu 2 147 -3 1 1168 180 111 0 0 chr15 76504874 76504901 -26990073 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 1168 252 244 0 180 chr15 76504934 76505034 -26989940 - ID_B1 SINE B4 -123 101 20 1 1168 241 216 20 0 chr15 76504991 76505042 -26989932 - ID4_ SINE ID -22 61 10 1 1168 315 327 37 0 chr15 76505054 76505161 -26989813 - PB1D10 SINE Alu -5 112 2 1 1168 237 320 158 10 chr15 76505174 76505275 -26989699 - PB1D10 SINE Alu 0 117 2 1 1168 730 261 179 8 chr15 76505275 76505638 -26989336 - L1MB4 LINE L1 -112 6068 5644 1 1168 386 127 14 0 chr15 76505770 76505841 -26989133 + (TTTTC)n Simple_repeat Simple_repeat 2 73 0 2 1168 645 88 289 0 chr15 76505843 76505957 -26989017 + B1_Mus1 SINE Alu 2 148 0 2 1168 23 0 0 0 chr15 76505959 76505982 -26988992 + AT_rich Low_complexity Low_complexity 1 23 0 2 1168 261 0 0 0 chr15 76506021 76506050 -26988924 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1168 1192 75 0 0 chr15 76506052 76506199 -26988775 - B1_Mm SINE Alu 0 147 1 2 1168 1148 148 11 0 chr15 76506317 76506493 -26988481 - B2_Mm1t SINE B2 -14 179 2 2 1168 334 255 147 0 chr15 76506589 76506691 -26988283 - B1F SINE Alu -9 140 24 2 1168 352 234 13 0 chr15 76506727 76506804 -26988170 - ID_B1 SINE B4 -3 221 144 2 1168 183 80 0 0 chr15 76506961 76506986 -26987988 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 1168 1654 36 0 0 chr15 76506992 76507184 -26987790 - B2_Mm1a SINE B2 0 193 2 2 1168 1038 95 0 20 chr15 76507189 76507339 -26987635 - B1_Mus1 SINE Alu -1 147 1 3 1168 401 274 8 17 chr15 76508195 76508314 -26986660 - ID_B1 SINE B4 -1 223 106 3 1168 1015 78 50 0 chr15 76508457 76508598 -26986376 - B1_Mus1 SINE Alu 0 148 1 3 1168 373 260 0 0 chr15 76508648 76508725 -26986249 + RSINE1 SINE B4 5 81 -84 3 1168 404 190 0 71 chr15 76508751 76508836 -26986138 - B1_Mur1 SINE Alu -22 127 49 3 1168 459 227 99 23 chr15 76509029 76509160 -26985814 + B1F SINE Alu 1 141 -8 3 1168 752 144 8 17 chr15 76509178 76509298 -26985676 + PB1D9 SINE Alu 1 119 -1 3 1168 486 298 72 10 chr15 76509300 76509493 -26985481 - MLT1F1 LTR MaLR -57 512 308 3 1168 680 152 80 0 chr15 76510506 76510631 -26984343 - B1_Mur1 SINE Alu 0 149 15 3 1168 306 138 0 0 chr15 76510669 76510727 -26984247 + (T)n Simple_repeat Simple_repeat 1 58 0 3 1168 538 214 50 64 chr15 76510729 76510869 -26984105 - B1F SINE Alu -1 148 11 4 1168 304 204 93 84 chr15 76510777 76510884 -26984090 - MT2B2 LTR ERVL -322 262 155 4 1168 270 0 0 0 chr15 76510884 76510914 -26984060 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1168 1227 54 0 0 chr15 76510914 76511061 -26983913 - B1_Mm SINE Alu 0 147 1 4 1168 271 270 100 11 chr15 76511096 76511186 -26983788 - PB1D10 SINE Alu -1 116 19 4 1168 1218 21 14 14 chr15 76511221 76511367 -26983607 - B1_Mm SINE Alu 0 147 2 4 1168 1041 195 42 70 chr15 76511373 76511588 -26983386 - B3 SINE B2 -6 210 2 4 1168 31 0 0 0 chr15 76512038 76512069 -26982905 + AT_rich Low_complexity Low_complexity 1 31 0 4 1168 413 287 0 27 chr15 76512079 76512190 -26982784 - PB1D10 SINE Alu -9 108 1 4 1168 705 189 121 0 chr15 76512394 76512526 -26982448 - B1_Mur2 SINE Alu -1 148 1 4 1168 817 232 116 0 chr15 76512585 76512783 -26982191 - ID_B1 SINE B4 0 224 4 5 1168 220 274 0 0 chr15 76512797 76512848 -26982126 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1168 1526 43 43 0 chr15 76512904 76513091 -26981883 - B2_Mm2 SINE B2 0 195 1 5 1168 480 240 131 8 chr15 76513098 76513220 -26981754 - B1_Mur2 SINE Alu -6 143 7 5 1168 400 241 254 54 chr15 76513225 76513417 -26981557 - B4A SINE B4 -62 230 1 5 1168 226 308 98 0 chr15 76513621 76513754 -26981220 - L1M5 LINE L1 -1606 4540 4395 5 1168 814 41 164 0 chr15 76514407 76514529 -26980445 + B1_Mus2 SINE Alu 6 147 0 5 1168 254 202 35 92 chr15 76514754 76514841 -26980133 - B1_Mur2 SINE Alu -27 122 41 5 1168 409 293 17 17 chr15 76514857 76514975 -26979999 - PB1D7 SINE Alu -1 119 2 5 1168 213 337 65 11 chr15 76514894 76514987 -26979987 - B4 SINE B4 -125 167 70 5 1168 867 186 109 52 chr15 76516168 76516361 -26978613 - B3 SINE B2 -10 206 3 6 1168 1033 142 0 0 chr15 76516370 76516518 -26978456 - B1_Mur4 SINE Alu -2 148 1 6 1168 25 31 0 0 chr15 76516525 76516557 -26978417 + AT_rich Low_complexity Low_complexity 1 32 0 6 1168 1483 54 0 11 chr15 76516557 76516743 -26978231 + B2_Mm1a SINE B2 2 185 -8 6 1168 1102 30 89 0 chr15 76516753 76516888 -26978086 + B1_Mm SINE Alu 1 147 0 6 1168 234 0 0 0 chr15 76516888 76516914 -26978060 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1168 704 171 56 28 chr15 76516917 76517061 -26977913 - B1_Mur1 SINE Alu -1 148 1 6 1168 866 217 31 11 chr15 76517061 76517251 -26977723 - B3A SINE B2 -1 197 3 6 1168 268 164 55 0 chr15 76517314 76517369 -26977605 - MTD LTR MaLR 0 419 362 6 1168 938 229 88 17 chr15 76517391 76517631 -26977343 - MTD LTR MaLR -162 257 1 6 1168 327 354 69 12 chr15 76531351 76531410 -26963564 + B4 SINE B4 24 192 -100 6 1168 625 129 10 0 chr15 76531410 76531511 -26963463 + B1_Mus1 SINE Alu 1 102 -46 7 1168 252 0 0 0 chr15 76531542 76531570 -26963404 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 7 1168 1440 165 164 75 chr15 76537792 76538080 -26956894 + ORR1C2 LTR MaLR 5 338 -46 7 1168 950 133 7 20 chr15 76538080 76538226 -26956748 + B1_Mur4 SINE Alu 5 148 -2 7 1168 1440 165 164 75 chr15 76538226 76538284 -26956690 + ORR1C2 LTR MaLR 339 382 -2 7 1168 1297 34 94 28 chr15 76538308 76538455 -26956519 + B2_Mm1a SINE B2 2 160 -33 7 1168 315 0 0 0 chr15 76538455 76538490 -26956484 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 7 1168 1297 34 94 28 chr15 76538490 76538522 -26956452 + B2_Mm1a SINE B2 161 193 0 7 1168 329 109 0 18 chr15 76539147 76539203 -26955771 + (GGGGA)n Simple_repeat Simple_repeat 3 57 0 7 1168 465 283 75 18 chr15 76542245 76542443 -26952531 - B3A SINE B2 -1 194 2 7 1168 448 247 134 12 chr15 76542483 76542655 -26952319 - B4 SINE B4 -99 193 1 7 1168 288 170 0 0 chr15 76542655 76542708 -26952266 + T-rich Low_complexity Low_complexity 1 53 0 7 1168 416 208 134 10 chr15 76543043 76543140 -26951834 + PB1D7 SINE Alu 2 110 -10 8 1169 926 151 0 33 chr15 76547617 76547768 -26947206 - B1_Mus2 SINE Alu -1 146 1 8 1169 1002 96 73 0 chr15 76547856 76547992 -26946982 + B1_Mus1 SINE Alu 3 148 0 8 1169 204 182 0 0 chr15 76549200 76549244 -26945730 + (CAG)n Simple_repeat Simple_repeat 3 46 0 8 1169 473 233 60 37 chr15 76549391 76549525 -26945449 + B1F SINE Alu 2 138 -11 8 1169 492 195 149 45 chr15 76549528 76549662 -26945312 + B1_Mur4 SINE Alu 2 149 -1 8 1169 242 29 29 0 chr15 76549681 76549716 -26945258 + (CAAAC)n Simple_repeat Simple_repeat 2 37 0 8 1169 254 217 0 0 chr15 76549721 76549767 -26945207 + B1_Mur1 SINE Alu 77 122 -27 8 1169 527 188 0 8 chr15 76549786 76549904 -26945070 + GA-rich Low_complexity Low_complexity 1 117 0 8 1169 334 310 18 9 chr15 76549960 76550074 -26944900 + RSINE1 SINE B4 10 124 -41 8 1169 216 0 0 0 chr15 76550110 76550134 -26944840 + (CA)n Simple_repeat Simple_repeat 2 25 0 9 1169 607 185 103 7 chr15 76550685 76550821 -26944153 - B1_Mur1 SINE Alu 0 149 1 9 1169 658 261 6 30 chr15 76550843 76551009 -26943965 - B3 SINE B2 0 216 55 9 1169 600 197 53 30 chr15 76551023 76551154 -26943820 - B1_Mus2 SINE Alu -13 134 1 9 1169 351 240 167 0 chr15 76551165 76551261 -26943713 - PB1D10 SINE Alu -5 112 1 9 1169 26 50 0 0 chr15 76554537 76554577 -26940397 + AT_rich Low_complexity Low_complexity 1 40 0 9 1169 329 211 47 19 chr15 76561287 76561393 -26933581 - L1MC3 LINE L1 -517 7268 7160 9 1169 418 300 43 94 chr15 76561591 76561826 -26933148 - ID_B1 SINE B4 0 224 2 9 1169 258 250 14 56 chr15 76561840 76561912 -26933062 - PB1D10 SINE Alu -8 109 41 9 1169 222 118 0 0 chr15 76562022 76562056 -26932918 + (A)n Simple_repeat Simple_repeat 1 34 0 9 1169 509 284 24 18 chr15 76562056 76562221 -26932753 - L1MC3 LINE L1 -1068 6717 6552 9 1169 879 150 50 0 chr15 76562221 76562361 -26932613 + B1_Mur4 SINE Alu 3 149 -1 1 1169 373 96 0 113 chr15 76562403 76562427 -26932547 - B1_Mus2 SINE Alu -29 120 103 1 1169 588 29 0 0 chr15 76562427 76562497 -26932477 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1169 373 39 0 89 chr15 76562497 76562539 -26932435 - B1_Mus2 SINE Alu -45 102 61 1 1169 546 232 79 14 chr15 76562562 76562702 -26932272 - B1_Mur3 SINE Alu 0 149 1 1 1169 292 290 65 0 chr15 76563114 76563207 -26931767 - B1_Mur1 SINE Alu -9 140 42 1 1169 405 0 0 0 chr15 76563259 76563304 -26931670 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1169 723 128 115 43 chr15 76563364 76563503 -26931471 + B1_Mur4 SINE Alu 1 149 -1 1 1169 213 81 54 0 chr15 76563506 76563543 -26931431 + (CAAAC)n Simple_repeat Simple_repeat 2 40 0 1 1169 295 179 0 0 chr15 76563551 76563607 -26931367 - B1F2 SINE Alu -93 56 1 1 1169 1103 97 7 0 chr15 76566284 76566429 -26928545 - B1_Mus2 SINE Alu 0 147 2 1 1169 281 24 49 0 chr15 76568688 76568729 -26926245 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 1 1169 1081 45 0 0 chr15 76568735 76568867 -26926107 + B1_Mus2 SINE Alu 16 147 0 1 1169 221 111 0 113 chr15 76568875 76568946 -26926028 + A-rich Low_complexity Low_complexity 5 67 0 1 1169 200 291 51 68 chr15 76571298 76571416 -26923558 - MIRm SINE MIR -97 179 64 1 1169 562 219 8 26 chr15 76572156 76572273 -26922701 - PB1D9 SINE Alu 0 120 6 1 1169 389 224 53 61 chr15 76572177 76572291 -26922683 - B4A SINE B4 -101 191 79 1 1169 526 237 26 0 chr15 76572819 76572933 -26922041 - PB1D9 SINE Alu -1 119 3 1 1169 1116 82 27 0 chr15 76573029 76573175 -26921799 + B1_Mur4 SINE Alu 1 150 0 1 1169 287 309 110 103 chr15 76574033 76574188 -26920786 + ID_B1 SINE B4 12 167 -57 1 1169 811 291 59 17 chr15 76574282 76574520 -26920454 + B4A SINE B4 43 290 -2 1 1169 1711 16 0 0 chr15 76575004 76575193 -26919781 + B2_Mm1a SINE B2 1 189 -4 1 1169 351 0 0 0 chr15 76575992 76576031 -26918943 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1169 279 0 0 0 chr15 76576145 76576176 -26918798 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 1169 1204 62 0 7 chr15 76576527 76576674 -26918300 + B1_Mus2 SINE Alu 2 147 0 1 1169 188 79 53 0 chr15 76576674 76576712 -26918262 + (CAAAC)n Simple_repeat Simple_repeat 5 44 0 1 1169 225 0 0 0 chr15 76576719 76576744 -26918230 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 1 1169 606 284 158 36 chr15 76576791 76576898 -26918076 + Cheshire DNA MER1_type 1832 1937 -483 1 1169 514 227 119 15 chr15 76576898 76577032 -26917942 + B1F SINE Alu 1 148 -1 1 1169 606 284 158 36 chr15 76577032 76577202 -26917772 + Cheshire DNA MER1_type 1938 2143 -277 1 1169 908 164 0 0 chr15 76577283 76577423 -26917551 - B1_Mus2 SINE Alu -7 140 1 1 1169 791 159 64 14 chr15 76577423 76577562 -26917412 - B1_Mur1 SINE Alu 0 149 3 1 1169 316 253 27 0 chr15 76577593 76577668 -26917306 - B4A SINE B4 -215 77 1 1 1169 180 176 0 0 chr15 76578213 76578247 -26916727 + (TAG)n Simple_repeat Simple_repeat 2 35 0 1 1169 235 360 42 79 chr15 76578329 76578519 -26916455 + MT2B2 LTR ERVL 96 278 -306 1 1169 800 257 98 5 chr15 76578350 76578534 -26916440 + ID_B1 SINE B4 15 215 -9 1 1169 699 292 25 0 chr15 76578547 76578749 -26916225 + B3 SINE B2 2 208 -8 1 1169 23 33 0 0 chr15 76578753 76578783 -26916191 + AT_rich Low_complexity Low_complexity 1 30 0 1 1169 616 160 20 10 chr15 76578883 76578984 -26915990 + PB1D9 SINE Alu 11 112 -8 1 1169 501 298 42 24 chr15 76578987 76579152 -26915822 + B3A SINE B2 30 197 -1 1 1169 988 208 49 5 chr15 76579160 76579363 -26915611 + B3 SINE B2 1 212 -4 1 1169 535 203 239 58 chr15 76579627 76579802 -26915172 + ID_B1 SINE B4 2 211 -13 1 1169 225 0 0 0 chr15 76579802 76579827 -26915147 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 1 1169 535 203 239 58 chr15 76579827 76579839 -26915135 + ID_B1 SINE B4 212 223 -1 1 1169 220 122 0 179 chr15 76579890 76580030 -26914944 + (CTGGGG)n Simple_repeat Simple_repeat 2 116 0 1 1169 406 206 0 142 chr15 76580159 76580175 -26914799 + MT2B LTR ERVL 161 175 -426 1 1169 847 182 0 13 chr15 76580175 76580325 -26914649 + B1_Mus1 SINE Alu 1 148 0 1 1169 406 206 0 142 chr15 76580325 76580421 -26914553 + MT2B LTR ERVL 176 257 -344 1 1169 1023 70 0 0 chr15 76580335 76580464 -26914510 + B1_Mus2 SINE Alu 17 145 -2 1 1169 493 204 315 0 chr15 76580503 76580665 -26914309 - B3 SINE B2 -3 213 1 1 1169 252 238 165 12 chr15 76580731 76580816 -26914158 - PB1 SINE Alu -3 124 27 1 1169 201 237 0 48 chr15 76581600 76581641 -26913333 + polypyrimidine Low_complexity Low_complexity 22 60 0 1 1169 367 229 56 19 chr15 76581641 76581748 -26913226 - PB1D7 SINE Alu -8 112 2 1 1169 201 237 0 48 chr15 76581748 76581768 -26913206 + polypyrimidine Low_complexity Low_complexity 2 21 0 1 1169 1537 43 11 16 chr15 76582634 76582825 -26912149 - B2_Mm1a SINE B2 -3 190 1 1 1169 290 268 14 14 chr15 76583037 76583109 -26911865 - PB1D7 SINE Alu -7 113 42 1 1169 920 180 129 21 chr15 76583283 76583476 -26911498 + B3 SINE B2 3 216 0 1 1169 210 37 0 0 chr15 76583966 76583993 -26910981 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1169 1101 97 14 0 chr15 76583998 76584143 -26910831 + B1_Mus1 SINE Alu 2 148 0 1 1169 26 0 0 0 chr15 76584143 76584169 -26910805 + AT_rich Low_complexity Low_complexity 1 26 0 1 1169 881 138 79 17 chr15 76584690 76584867 -26910107 - B2_Mm2 SINE B2 -6 189 2 1 1169 328 352 0 18 chr15 76584877 76584987 -26909987 - PB1D10 SINE Alu -9 108 1 1 1169 663 282 0 13 chr15 76585035 76585186 -26909788 - RSINE1 SINE B4 -1 164 16 1 1169 200 31 62 0 chr15 76585686 76585718 -26909256 + (TCTCTG)n Simple_repeat Simple_repeat 6 39 0 1 1169 1158 81 32 26 chr15 76585720 76585910 -26909064 + RMER17C LTR ERVK 220 410 0 1 1169 650 237 255 55 chr15 76586225 76586515 -26908459 + ORR1D2 LTR MaLR 8 355 -4 1 1169 183 129 0 0 chr15 76586576 76586607 -26908367 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1169 221 239 15 0 chr15 76587133 76587200 -26907774 + (TCTCTG)n Simple_repeat Simple_repeat 4 71 0 1 1169 641 164 179 8 chr15 76587207 76587330 -26907644 - B1_Mus1 SINE Alu 0 148 5 1 1169 246 196 54 0 chr15 76587800 76587856 -26907118 + PB1 SINE Alu 42 100 -27 1 1169 800 279 65 65 chr15 76587955 76588308 -26906666 + MTE2a LTR MaLR 27 379 0 1 1169 1360 74 11 0 chr15 76588484 76588660 -26906314 - B2_Mm1t SINE B2 -14 179 2 1 1169 538 266 127 26 chr15 76590097 76590285 -26904689 + B4A SINE B4 7 213 -79 1 1169 1037 249 99 20 chr15 76590285 76590615 -26904359 - ORR1E LTR MaLR 0 370 1 1 1169 378 249 205 11 chr15 76590932 76591143 -26903831 + L1MC3 LINE L1 7238 7450 -335 1 1169 482 191 8 27 chr15 76593837 76593941 -26901033 + PB1D9 SINE Alu 12 120 0 1 1169 769 130 16 8 chr15 76594128 76594252 -26900722 + B1_Mus2 SINE Alu 23 147 0 1 1169 294 256 51 0 chr15 76594367 76594445 -26900529 + ID4 SINE ID 2 83 0 1 1169 775 188 114 5 chr15 76594673 76594866 -26900108 - B3 SINE B2 0 216 3 1 1169 822 295 29 10 chr15 76594871 76595080 -26899894 - ID_B1 SINE B4 0 224 12 1 1169 400 262 143 74 chr15 76596554 76596785 -26898189 + L1M5 LINE L1 4935 5181 -965 1 1169 362 149 66 14 chr15 76596794 76596885 -26898089 + B1_Mur1 SINE Alu 2 132 -17 1 1169 351 192 0 0 chr15 76596910 76596983 -26897991 + GA-rich Low_complexity Low_complexity 3 75 0 1 1169 241 283 0 0 chr15 76597759 76597805 -26897169 + B1F2 SINE Alu 1 46 -103 1 1169 487 78 26 0 chr15 76597808 76597885 -26897089 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 1 1169 848 228 86 0 chr15 76598038 76598235 -26896739 + B3 SINE B2 3 216 0 1 1169 232 295 27 0 chr15 76598243 76598355 -26896619 + Lx7 LINE L1 3490 3604 -2536 1 1169 406 190 54 29 chr15 76598399 76598558 -26896416 + Lx7 LINE L1 3599 3762 -2381 1 1169 233 279 0 0 chr15 76598986 76599047 -26895927 + Lx7 LINE L1 3769 3829 -2051 1 1169 471 191 124 0 chr15 76599062 76599167 -26895807 - BC1_Mm scRNA scRNA -34 118 1 1 1169 522 255 36 20 chr15 76599167 76599363 -26895611 + L1M2 LINE L1 3884 4082 -2058 1 1169 527 66 13 0 chr15 76599363 76599439 -26895535 + B1_Mur4 SINE Alu 74 150 0 1 1169 189 0 0 0 chr15 76599439 76599460 -26895514 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1169 1268 282 141 24 chr15 76599460 76600331 -26894643 + L1M2 LINE L1 4073 5045 -1098 1 1169 281 136 0 0 chr15 76600527 76600571 -26894403 - B3A SINE B2 -84 114 71 1 1169 627 308 112 77 chr15 76600574 76601493 -26893481 + Lx7 LINE L1 5300 6252 -1221 1 1169 342 0 0 0 chr15 76601628 76601666 -26893308 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1169 521 15 15 0 chr15 76601927 76601993 -26892981 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 1169 546 174 27 18 chr15 76602203 76602314 -26892660 - PB1D9 SINE Alu 0 120 9 1 1169 332 287 19 19 chr15 76602230 76602333 -26892641 - ID_B1 SINE B4 -52 172 70 1 1169 783 179 174 60 chr15 76602370 76602554 -26892420 - B3 SINE B2 -11 205 1 1 1169 835 246 85 10 chr15 76602611 76602812 -26892162 + B3 SINE B2 1 216 0 1 1169 1164 59 0 0 chr15 76602819 76602955 -26892019 + B1_Mus1 SINE Alu 1 136 -12 1 1169 180 0 0 0 chr15 76602956 76602976 -26891998 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 1169 222 210 156 100 chr15 76602992 76603082 -26891892 + PB1D10 SINE Alu 13 107 -10 1 1169 242 294 68 88 chr15 76603150 76603214 -26891760 - L1MD LINE L1 -3172 2974 2923 1 1169 1002 237 14 9 chr15 76603214 76603427 -26891547 + B3 SINE B2 1 214 -2 1 1169 242 294 68 88 chr15 76603427 76603509 -26891465 - L1MD LINE L1 -3224 2922 2847 1 1169 322 312 53 35 chr15 76603509 76603622 -26891352 - PB1D10 SINE Alu 0 117 3 1 1169 242 294 68 88 chr15 76603622 76603724 -26891250 - L1MD LINE L1 -3300 2846 2731 1 1169 803 173 15 22 chr15 76603726 76603862 -26891112 + B1_Mur1 SINE Alu 5 139 -10 2 1169 919 110 0 0 chr15 76604310 76604437 -26890537 + B1_Mus1 SINE Alu 2 128 -20 2 1169 2277 136 76 13 chr15 76604515 76604909 -26890065 + MTC LTR MaLR 1 419 -2 2 1169 313 293 101 95 chr15 76605008 76605161 -26889813 - L1MC3 LINE L1 -717 7068 6908 2 1169 1028 204 39 0 chr15 76605161 76605367 -26889607 - B3 SINE B2 0 216 3 2 1169 313 293 101 95 chr15 76605367 76605560 -26889414 - L1MC3 LINE L1 -878 6907 6720 2 1169 973 200 63 0 chr15 76605570 76605760 -26889214 + B3 SINE B2 1 202 -14 2 1169 1225 248 39 21 chr15 76605975 76606255 -26888719 - MTEb LTR MaLR -94 285 1 2 1169 868 158 0 7 chr15 76606261 76606401 -26888573 + B1_Mur3 SINE Alu 11 149 0 2 1169 683 311 0 46 chr15 76606542 76606576 -26888398 + B3A SINE B2 1 29 -169 2 1169 3613 15 2 0 chr15 76606576 76606971 -26888003 + MTA_Mm LTR MaLR 1 396 0 2 1169 9215 38 2 2 chr15 76606971 76608069 -26886905 + MTA_Mm-int LTR MaLR 1 1098 0 2 1169 3613 15 2 0 chr15 76608069 76608464 -26886510 + MTA_Mm LTR MaLR 1 396 0 2 1169 683 307 65 105 chr15 76608464 76608627 -26886347 + B3A SINE B2 30 190 -5 2 1169 220 196 0 89 chr15 76608624 76608636 -26886338 + B4A SINE B4 84 134 -158 2 1169 264 142 0 0 chr15 76608636 76608680 -26886294 + B1_Mus1 SINE Alu 7 50 -100 2 1169 247 348 93 19 chr15 76608685 76608890 -26886084 - L1MC3 LINE L1 -1242 6543 6324 2 1169 418 239 32 57 chr15 76609195 76609319 -26885655 + RSINE1 SINE B4 2 122 -43 2 1169 223 296 203 56 chr15 76609339 76609358 -26885616 - B4A SINE B4 -46 246 167 2 1169 515 189 47 9 chr15 76609358 76609465 -26885509 - PB1D9 SINE Alu -2 118 8 2 1169 223 296 203 56 chr15 76609465 76609482 -26885492 - B4A SINE B4 -46 166 83 2 1169 215 304 30 89 chr15 76609754 76609855 -26885119 - B1_Mur4 SINE Alu -6 144 50 2 1169 1246 191 216 12 chr15 76609897 76610216 -26884758 + ORR1C2 LTR MaLR 1 384 0 2 1169 225 0 0 0 chr15 76610510 76610535 -26884439 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 1169 280 328 0 0 chr15 76610702 76610766 -26884208 - ID4_ SINE ID -1 82 19 2 1169 475 244 261 31 chr15 76611067 76611228 -26883746 - B3 SINE B2 -15 201 4 2 1169 621 254 22 0 chr15 76612021 76612155 -26882819 - B1F SINE Alu -2 147 11 2 1169 276 221 135 63 chr15 76612081 76612192 -26882782 - MT2B2 LTR ERVL -343 241 123 2 1169 325 365 17 0 chr15 76612475 76612590 -26882384 + PB1D10 SINE Alu 1 117 0 2 1169 453 365 12 12 chr15 76612593 76612754 -26882220 + RSINE1 SINE B4 2 162 -3 2 1169 702 243 16 25 chr15 76613671 76613855 -26881119 - ID_B1 SINE B4 -47 245 72 2 1169 180 97 0 0 chr15 76615713 76615744 -26879230 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1169 1239 34 0 0 chr15 76616781 76616928 -26878046 + B1_Mm SINE Alu 1 147 0 2 1169 789 199 14 14 chr15 76617155 76617303 -26877671 - B1_Mur2 SINE Alu -1 148 1 2 1169 1764 151 17 7 chr15 76617507 76617808 -26877166 + MTC LTR MaLR 1 304 -117 2 1169 280 335 74 25 chr15 76618010 76618265 -26876709 - MTEa LTR MaLR -59 320 18 2 1169 475 286 69 31 chr15 76618551 76618710 -26876264 + ID_B1 SINE B4 1 165 -59 2 1169 182 62 31 0 chr15 76619576 76619608 -26875366 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 2 1169 1014 67 74 0 chr15 76619613 76619748 -26875226 - B1_Mus1 SINE Alu -1 147 3 2 1169 1120 270 129 11 chr15 76620260 76620523 -26874451 + MER44C DNA MER2_type 317 601 -132 2 1169 1426 94 16 0 chr15 76620523 76620715 -26874259 + B2_Mm2 SINE B2 1 195 0 2 1169 192 40 0 0 chr15 76620725 76620750 -26874224 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 1169 1120 270 129 11 chr15 76620750 76620838 -26874136 + MER44C DNA MER2_type 612 721 -12 2 1169 313 231 63 13 chr15 76620976 76621055 -26873919 - PB1D10 SINE Alu 0 117 35 2 1169 232 225 68 136 chr15 76620981 76621084 -26873890 - ID_B1 SINE B4 -4 220 125 2 1169 649 118 24 0 chr15 76621255 76621382 -26873592 + (GGAA)n Simple_repeat Simple_repeat 4 133 0 2 1169 206 216 39 0 chr15 76622928 76622979 -26871995 + L2 LINE L2 1984 2036 -1383 2 1169 341 267 132 9 chr15 76622997 76623103 -26871871 + L1M4 LINE L1 5086 5204 -942 2 1169 788 136 83 0 chr15 76623106 76623238 -26871736 + B1_Mur4 SINE Alu 7 149 -1 2 1169 306 111 0 0 chr15 76623266 76623311 -26871663 + B3A SINE B2 1 45 -153 2 1169 857 118 39 0 chr15 76623312 76623439 -26871535 - B1_Mus1 SINE Alu -16 132 1 2 1169 1182 220 66 36 chr15 76623440 76623775 -26871199 + ORR1D1 LTR MaLR 30 374 0 2 1169 262 243 213 7 chr15 76624317 76624458 -26870516 + RMER15 LTR ERVL 405 574 -1 2 1169 875 257 16 0 chr15 76624458 76624644 -26870330 + B4A SINE B4 43 231 -61 2 1169 405 242 30 81 chr15 76624704 76624803 -26870171 + RSINE1 SINE B4 72 165 0 2 1169 351 0 0 0 chr15 76624951 76624990 -26869984 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1169 1271 95 21 21 chr15 76625082 76625275 -26869699 + B2_Mm2 SINE B2 3 195 0 2 1169 607 203 61 30 chr15 76626193 76626325 -26868649 + B1F SINE Alu 12 147 -2 2 1169 545 258 74 25 chr15 76626325 76626528 -26868446 + B3 SINE B2 2 214 -2 2 1169 217 204 143 0 chr15 76627059 76627108 -26867866 - RSINE1 SINE B4 -107 58 3 2 1169 3142 24 27 0 chr15 76627134 76627505 -26867469 + L1Md_F2 LINE L1 6202 6582 0 2 1169 403 236 34 0 chr15 76627910 76627999 -26866975 + B3A SINE B2 65 156 -42 2 1169 218 105 0 26 chr15 76628747 76628786 -26866188 + (TCTCCC)n Simple_repeat Simple_repeat 3 40 0 2 1169 243 61 0 0 chr15 76628786 76628819 -26866155 + (T)n Simple_repeat Simple_repeat 1 33 0 2 1169 757 230 32 41 chr15 76628957 76629175 -26865799 + B3 SINE B2 1 216 0 2 1169 190 319 134 25 chr15 76629181 76629300 -26865674 - L2c LINE L2 -9 3378 3247 2 1169 234 0 0 0 chr15 76629307 76629333 -26865641 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 1169 920 210 77 0 chr15 76629479 76629674 -26865300 + B3 SINE B2 1 210 -6 2 1169 21 0 0 0 chr15 76630287 76630308 -26864666 + AT_rich Low_complexity Low_complexity 1 21 0 2 1169 731 189 0 42 chr15 76630406 76630550 -26864424 + B1_Mur2 SINE Alu 12 149 0 2 1169 423 38 0 0 chr15 76630608 76630661 -26864313 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1169 183 146 0 0 chr15 76630664 76630705 -26864269 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 2 1169 792 176 30 0 chr15 76630705 76630836 -26864138 - B1_Mur1 SINE Alu -14 135 1 2 1169 563 279 81 52 chr15 76631303 76631575 -26863399 + B4A SINE B4 2 281 -11 2 1169 653 171 16 33 chr15 76631626 76631747 -26863227 + B1_Mur1 SINE Alu 1 119 -30 2 1169 246 314 81 24 chr15 76631899 76632023 -26862951 - ORR1E LTR MaLR -225 134 4 2 1169 369 315 23 23 chr15 76632005 76632025 -26862949 + ID SINE ID 60 79 -145 2 1169 635 210 24 16 chr15 76632025 76632151 -26862823 + B1_Mur1 SINE Alu 2 128 -21 2 1169 450 0 0 0 chr15 76632201 76632251 -26862723 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1169 395 255 178 7 chr15 76632606 76632637 -26862337 - B4 SINE B4 -41 251 132 2 1169 575 192 10 0 chr15 76632637 76632741 -26862233 - PB1D9 SINE Alu -7 113 9 2 1169 395 255 178 7 chr15 76632741 76632752 -26862222 - B4 SINE B4 -41 131 81 2 1169 632 186 256 6 chr15 76633282 76633450 -26861524 + B3 SINE B2 2 211 -5 2 1169 1240 47 0 0 chr15 76633469 76633617 -26861357 + B1_Mus1 SINE Alu 1 148 0 2 1169 393 149 0 0 chr15 76633620 76633687 -26861287 + (A)n Simple_repeat Simple_repeat 1 67 0 2 1169 421 266 305 12 chr15 76633690 76633854 -26861120 + B4A SINE B4 81 292 0 2 1169 198 343 86 0 chr15 76634257 76634362 -26860612 + MIRb SINE MIR 17 130 -138 2 1169 274 122 24 0 chr15 76634593 76634634 -26860340 - ID_B1 SINE B4 -7 217 176 2 1169 256 256 385 0 chr15 76634634 76634671 -26860303 - PB1D10 SINE Alu -7 110 3 2 1169 1105 210 28 14 chr15 76634803 76635016 -26859958 - B3 SINE B2 0 216 1 2 1169 495 254 69 0 chr15 76635253 76635383 -26859591 - RSINE1 SINE B4 -23 142 4 2 1169 480 244 78 78 chr15 76635448 76635577 -26859397 + B4 SINE B4 1 129 -163 2 1169 723 203 118 27 chr15 76635609 76635796 -26859178 + B3 SINE B2 9 212 -4 2 1169 380 252 12 5 chr15 76635798 76635895 -26859079 + B4 SINE B4 212 292 0 2 1169 180 0 0 0 chr15 76635920 76635940 -26859034 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 1169 1210 68 0 0 chr15 76635957 76636104 -26858870 - B1_Mm SINE Alu 0 147 1 2 1169 1412 283 82 13 chr15 76636127 76636739 -26858235 + L1M4 LINE L1 4338 4991 -1155 2 1169 521 256 83 0 chr15 76636741 76636862 -26858112 + ID_B1 SINE B4 84 214 -10 2 1169 737 191 20 33 chr15 76636964 76637116 -26857858 + B1_Mur4 SINE Alu 1 150 0 2 1169 238 163 0 0 chr15 76637128 76637171 -26857803 + L1M4 LINE L1 5018 5060 -1086 2 1169 344 307 17 34 chr15 76637181 76637299 -26857675 - B1F SINE Alu 0 149 34 2 1169 231 88 0 0 chr15 76637331 76637365 -26857609 + (TC)n Simple_repeat Simple_repeat 1 34 0 2 1169 208 253 25 25 chr15 76637368 76637449 -26857525 + (CA)n Simple_repeat Simple_repeat 1 81 0 2 1169 226 312 17 84 chr15 76637449 76637568 -26857406 - RMER12 LTR ERVK -462 860 750 2 1169 362 335 161 6 chr15 76637641 76637815 -26857159 + ID_B1 SINE B4 15 215 -9 2 1169 616 253 41 97 chr15 76637815 76638082 -26856892 + L1M4 LINE L1 5519 5770 -414 2 1169 396 184 9 67 chr15 76638420 76638525 -26856449 - B1_Mus1 SINE Alu -40 108 10 2 1169 249 171 30 180 chr15 76638452 76638552 -26856422 - MT2B LTR ERVL -366 235 151 2 1169 287 156 173 49 chr15 76638636 76638717 -26856257 + B3A SINE B2 1 91 -104 2 1169 1205 61 0 0 chr15 76639529 76639676 -26855298 + B1_Mus1 SINE Alu 2 148 0 2 1169 731 83 8 0 chr15 76640163 76640284 -26854690 + (GA)n Simple_repeat Simple_repeat 2 123 0 2 1169 949 213 127 75 chr15 76640703 76640920 -26854054 - L1MB7 LINE L1 -22 6162 5907 3 1169 503 196 65 0 chr15 76640920 76641012 -26853962 + PB1D10 SINE Alu 1 98 -19 3 1169 949 213 127 75 chr15 76641012 76641026 -26853948 - L1MB7 LINE L1 -278 5906 5898 3 1169 198 0 0 0 chr15 76641026 76641048 -26853926 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 3 1169 949 213 127 75 chr15 76641048 76641114 -26853860 - L1MB7 LINE L1 -287 5897 5849 3 1169 563 228 0 0 chr15 76641114 76641228 -26853746 - PB1D9 SINE Alu -6 114 1 3 1169 949 213 127 75 chr15 76641228 76641354 -26853620 - L1MB7 LINE L1 -336 5848 5715 3 1169 330 247 71 134 chr15 76641403 76641515 -26853459 - RSINE1 SINE B4 0 165 61 3 1169 354 127 0 0 chr15 76641526 76641597 -26853377 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 1169 245 303 43 43 chr15 76641725 76641818 -26853156 - RLTR18 LTR ERVK -332 284 192 3 1169 231 219 0 0 chr15 76642042 76642083 -26852891 - RSINE1 SINE B4 -122 43 3 3 1169 1272 101 39 16 chr15 76642230 76642412 -26852562 + B2_Mm2 SINE B2 2 187 -8 3 1169 641 197 143 0 chr15 76642467 76642614 -26852360 + ORR1C2 LTR MaLR 176 343 -41 3 1169 1200 61 0 0 chr15 76642614 76642762 -26852212 + B1_Mus1 SINE Alu 1 148 0 3 1169 26 0 0 0 chr15 76642764 76642790 -26852184 + AT_rich Low_complexity Low_complexity 1 26 0 3 1169 990 199 69 15 chr15 76643319 76643523 -26851451 - B3 SINE B2 0 216 2 3 1169 428 235 14 35 chr15 76643643 76643776 -26851198 - PB1D9 SINE Alu -12 137 3 3 1169 212 293 19 57 chr15 76643691 76643796 -26851178 - B4 SINE B4 -123 169 69 3 1169 236 200 17 52 chr15 76643816 76643874 -26851100 - B1_Mus1 SINE Alu -90 58 3 3 1169 485 261 87 0 chr15 76643892 76644030 -26850944 - RSINE1 SINE B4 -12 153 4 3 1169 309 109 0 0 chr15 76644051 76644106 -26850868 + (CTA)n Simple_repeat Simple_repeat 2 56 0 3 1169 251 175 0 17 chr15 76644112 76644170 -26850804 + GA-rich Low_complexity Low_complexity 1 57 0 3 1169 517 315 21 0 chr15 76644196 76644339 -26850635 - RSINE1 SINE B4 -17 148 3 3 1169 974 223 13 18 chr15 76644350 76644574 -26850400 - ID_B1 SINE B4 0 224 2 3 1169 435 188 21 12 chr15 76644797 76645045 -26849929 + (CA)n Simple_repeat Simple_repeat 1 250 0 3 1169 258 293 12 0 chr15 76646689 76646771 -26848203 + (CA)n Simple_repeat Simple_repeat 2 84 0 3 1169 586 306 63 3 chr15 76646951 76647190 -26847784 - MIR SINE MIR -3 265 7 3 1169 461 242 146 38 chr15 76649055 76649194 -26845780 - RSINE1 SINE B4 0 165 8 3 1169 702 214 127 25 chr15 76649211 76649408 -26845566 - ID_B1 SINE B4 -4 220 4 3 1169 229 246 65 16 chr15 76649421 76649483 -26845491 - PB1D10 SINE Alu 0 117 53 3 1169 804 167 20 14 chr15 76649565 76649711 -26845263 - B1_Mus1 SINE Alu 0 148 2 3 1169 459 291 68 130 chr15 76649784 76649876 -26845098 + B3A SINE B2 14 104 -94 3 1169 1183 75 0 0 chr15 76649876 76650023 -26844951 + B1_Mus1 SINE Alu 2 148 0 3 1169 459 291 68 130 chr15 76650023 76650034 -26844940 + B3A SINE B2 105 105 -93 3 1169 180 0 0 0 chr15 76650034 76650054 -26844920 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 3 1169 459 291 68 130 chr15 76650054 76650111 -26844863 + B3A SINE B2 105 165 -33 3 1169 390 309 39 16 chr15 76650162 76650290 -26844684 - RSINE1 SINE B4 0 165 35 3 1169 978 182 66 25 chr15 76651128 76651325 -26843649 - B3 SINE B2 -8 208 4 3 1169 1438 65 22 5 chr15 76651369 76651554 -26843420 - B2_Mm2 SINE B2 -7 188 1 3 1169 180 378 0 24 chr15 76651831 76651915 -26843059 + L2 LINE L2 1713 1794 -1625 3 1169 723 199 141 24 chr15 76651922 76652092 -26842882 - B3 SINE B2 0 216 27 3 1169 1299 97 11 6 chr15 76652108 76652285 -26842689 + B2_Mm1t SINE B2 2 179 -14 3 1169 391 124 300 58 chr15 76652317 76652437 -26842537 + B2_Mm2 SINE B2 47 195 0 3 1169 656 235 44 0 chr15 76652792 76652928 -26842046 + B1_Mur1 SINE Alu 3 144 -5 3 1169 239 203 16 0 chr15 76652929 76652993 -26841981 + GA-rich Low_complexity Low_complexity 2 66 0 3 1169 998 274 30 84 chr15 76653024 76653359 -26841615 + MTEa LTR MaLR 51 367 -12 3 1169 407 256 29 24 chr15 76653675 76653817 -26841157 + PB1D10 SINE Alu 6 149 0 3 1169 741 243 28 37 chr15 76653919 76654137 -26840837 + B3 SINE B2 1 216 0 3 1169 293 191 29 0 chr15 76654156 76654224 -26840750 - Lx7 LINE L1 -12 7684 7615 3 1169 515 95 0 26 chr15 76654229 76654305 -26840669 + B1_Mus2 SINE Alu 74 147 0 3 1169 216 0 0 0 chr15 76654305 76654329 -26840645 + (GAAA)n Simple_repeat Simple_repeat 3 26 0 3 1169 1042 125 11 0 chr15 76654329 76654505 -26840469 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 3 1169 2404 265 86 82 chr15 76654556 76655463 -26839511 - Lx7 LINE L1 -333 7363 6453 3 1169 5819 218 67 14 chr15 76655468 76657077 -26837897 - Lx7 LINE L1 -1374 6322 4558 3 1169 207 0 0 0 chr15 76657087 76657110 -26837864 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 1169 931 173 0 0 chr15 76657110 76657249 -26837725 - B1_Mur4 SINE Alu -10 140 2 3 1169 5819 204 61 9 chr15 76657249 76657294 -26837680 - Lx7 LINE L1 -1323 4557 4518 3 1169 516 212 20 0 chr15 76657338 76657437 -26837537 + B3 SINE B2 114 214 -2 3 1169 1167 117 0 0 chr15 76658035 76658215 -26836759 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1169 743 186 26 58 chr15 76658404 76658558 -26836416 + B1_Mur1 SINE Alu 1 149 0 3 1169 273 219 0 72 chr15 76658579 76658648 -26836326 + B1_Mur2 SINE Alu 54 117 -32 3 1169 1456 67 0 40 chr15 76658725 76658926 -26836048 + B2_Mm1a SINE B2 1 193 0 3 1169 401 319 83 23 chr15 76658995 76659388 -26835586 + L1_Mur3 LINE L1 1242 1652 -4234 3 1169 1268 47 0 0 chr15 76659388 76659536 -26835438 + B1_Mus1 SINE Alu 1 148 0 3 1169 254 317 93 41 chr15 76659536 76659551 -26835423 + L1_Mur3 LINE L1 1653 1665 -4221 3 1169 22 35 0 0 chr15 76659551 76659580 -26835394 + AT_rich Low_complexity Low_complexity 1 29 0 3 1169 3353 48 0 5 chr15 76659580 76659982 -26834992 - MTB LTR MaLR 0 400 1 3 1169 1333 96 37 0 chr15 76660049 76660237 -26834737 + B2_Mm2 SINE B2 1 195 0 3 1169 909 53 0 0 chr15 76660237 76660351 -26834623 + B1_Mm SINE Alu 34 147 0 3 1169 354 45 0 0 chr15 76660351 76660395 -26834579 + (A)n Simple_repeat Simple_repeat 1 44 0 3 1169 263 267 11 95 chr15 76660404 76660418 -26834556 + MT2B LTR ERVL 154 159 -442 3 1169 631 260 24 0 chr15 76660418 76660545 -26834429 + B1F2 SINE Alu 4 133 -16 3 1169 747 242 28 28 chr15 76660583 76660775 -26834199 + B3A SINE B2 15 216 0 3 1169 628 187 73 0 chr15 76660798 76660921 -26834053 + B1_Mur1 SINE Alu 18 149 0 3 1169 399 242 0 78 chr15 76660946 76661049 -26833925 + RSINE1 SINE B4 23 117 -48 3 1169 225 0 0 0 chr15 76661049 76661074 -26833900 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1169 558 156 98 27 chr15 76661191 76661303 -26833671 - PB1D9 SINE Alu 0 120 1 3 1169 714 257 184 28 chr15 76661303 76661640 -26833334 + Lx8 LINE L1 5427 5792 -55 3 1169 824 159 32 73 chr15 76661640 76661748 -26833226 - ORR1C2 LTR MaLR 0 384 174 3 1169 333 0 0 0 chr15 76661748 76661785 -26833189 + (CAGA)n Simple_repeat Simple_repeat 4 40 0 3 1169 824 163 181 49 chr15 76661785 76661938 -26833036 - ORR1C2 LTR MaLR -211 173 2 3 1169 353 293 45 52 chr15 76661942 76662223 -26832751 + Lx8 LINE L1 5825 6095 -1601 3 1169 1114 105 12 6 chr15 76662262 76662425 -26832549 + B2_Mm1t SINE B2 3 166 -27 3 1169 565 286 0 0 chr15 76662481 76662593 -26832381 + B1_Mur1 SINE Alu 2 113 -36 3 1169 608 271 40 51 chr15 76662607 76662765 -26832209 + B3A SINE B2 3 164 -34 3 1169 333 0 0 0 chr15 76662765 76662802 -26832172 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1169 570 271 40 51 chr15 76662802 76662818 -26832156 + B3 SINE B2 164 175 -41 3 1169 509 237 61 0 chr15 76662813 76662927 -26832047 + B1_Mus2 SINE Alu 6 126 -21 3 1169 221 0 0 33 chr15 76663036 76663066 -26831908 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1169 1182 30 0 0 chr15 76663069 76663204 -26831770 - B1_Mus2 SINE Alu -12 135 1 3 1169 675 278 25 27 chr15 76663766 76663930 -26831044 + B3A SINE B2 1 159 -39 3 1169 231 61 0 0 chr15 76663930 76663963 -26831011 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1169 357 302 20 94 chr15 76663963 76663999 -26830975 + B2_Mm1a SINE B2 152 186 -7 3 1169 1369 265 148 86 chr15 76664028 76664824 -26830150 + MTE-int LTR MaLR 6 1098 -482 3 1169 668 143 9 0 chr15 76664824 76664929 -26830045 - RLTR19C LTR ERVK 0 496 391 3 1169 418 179 0 21 chr15 76664929 76665026 -26829948 + GA-rich Low_complexity Low_complexity 4 98 0 3 1169 1347 156 26 53 chr15 76665026 76665290 -26829684 - RLTR19C LTR ERVK -104 402 146 3 1169 187 31 62 0 chr15 76665290 76665322 -26829652 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 3 1169 875 55 0 0 chr15 76665338 76665448 -26829526 + B1_Mus1 SINE Alu 30 139 -9 3 1169 261 0 0 0 chr15 76665448 76665477 -26829497 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1169 730 209 116 81 chr15 76665481 76665679 -26829295 + MTE2a LTR MaLR 172 376 -3 3 1169 3538 28 0 0 chr15 76665750 76666146 -26828828 + MTA_Mm LTR MaLR 1 396 0 3 1169 9482 34 0 1 chr15 76666146 76667245 -26827729 + MTA_Mm-int LTR MaLR 1 1098 0 3 1169 3189 48 0 17 chr15 76667245 76667542 -26827432 + MTA_Mm LTR MaLR 1 297 -99 3 1169 3703 33 16 0 chr15 76667542 76667971 -26827003 - RLTR10C LTR ERVK 0 436 1 3 1169 3189 48 0 17 chr15 76667971 76668076 -26826898 + MTA_Mm LTR MaLR 298 396 0 3 1169 1080 284 95 34 chr15 76668080 76668572 -26826402 + Lx8 LINE L1 6391 6922 -551 3 1169 680 212 76 0 chr15 76668572 76668704 -26826270 + B1_Mur1 SINE Alu 1 142 -7 3 1169 1080 280 37 37 chr15 76668704 76668739 -26826235 + Lx8 LINE L1 6923 6948 -525 3 1169 267 295 93 55 chr15 76668868 76669049 -26825925 + RMER17D LTR ERVK 117 303 -586 3 1169 1560 68 0 0 chr15 76669049 76669241 -26825733 - B2_Mm1a SINE B2 0 193 2 3 1169 267 295 93 55 chr15 76669241 76669336 -26825638 + RMER17D LTR ERVK 304 405 -484 3 1169 418 192 88 29 chr15 76669336 76669438 -26825536 - PB1D9 SINE Alu -8 112 5 3 1169 267 295 93 55 chr15 76669438 76669451 -26825523 + RMER17D LTR ERVK 406 417 -472 3 1169 459 250 0 0 chr15 76669473 76669565 -26825409 + B1_Mus2 SINE Alu 54 145 -2 3 1169 232 288 62 12 chr15 76669556 76669637 -26825337 + MLT1J2 LTR MaLR 97 181 -331 3 1169 316 217 0 0 chr15 76669645 76669705 -26825269 + RMER15 LTR ERVL 1 60 -515 3 1169 945 143 0 0 chr15 76669761 76669901 -26825073 - B1_Mus2 SINE Alu -7 140 1 3 1169 1094 174 31 22 chr15 76669953 76670176 -26824798 + URR1B DNA MER1_type 1 225 0 3 1169 2408 209 37 30 chr15 76670186 76670729 -26824245 + RMER15 LTR ERVL 27 573 -2 3 1169 252 312 138 48 chr15 76670807 76670952 -26824022 + MLT1J2 LTR MaLR 265 422 -26 3 1169 3147 265 113 69 chr15 76670970 76671361 -26823613 + MTE-int LTR MaLR 465 912 -668 3 1169 2632 145 49 57 chr15 76671361 76671788 -26823186 + RLTR28 LTR ERVL 1 431 -93 3 1169 1403 61 33 0 chr15 76671788 76671968 -26823006 - B2_Mm2 SINE B2 -9 186 1 4 1169 2632 145 49 57 chr15 76671968 76672068 -26822906 + RLTR28 LTR ERVL 432 524 0 3 1169 3147 265 113 69 chr15 76672068 76672599 -26822375 + MTE-int LTR MaLR 913 1427 -153 3 1169 484 273 146 11 chr15 76672599 76672784 -26822190 - B3 SINE B2 -5 211 2 4 1169 3147 265 113 69 chr15 76672784 76672929 -26822045 + MTE-int LTR MaLR 1428 1580 0 3 1169 1787 153 35 13 chr15 76672937 76673249 -26821725 - ORR1D1 LTR MaLR 0 374 56 4 1169 258 95 0 0 chr15 76673250 76673292 -26821682 + (A)n Simple_repeat Simple_repeat 1 42 0 4 1169 279 200 0 0 chr15 76673308 76673353 -26821621 - ORR1D1 LTR MaLR -339 45 1 4 1169 342 284 25 0 chr15 76673364 76673445 -26821529 + MTEb LTR MaLR 20 102 -277 4 1169 504 0 0 0 chr15 76673494 76673550 -26821424 + (TC)n Simple_repeat Simple_repeat 2 57 0 4 1169 620 241 61 31 chr15 76673550 76673713 -26821261 + MTEb LTR MaLR 210 377 -2 4 1169 1045 116 7 7 chr15 76673935 76674083 -26820891 + B1_Mus1 SINE Alu 1 148 0 4 1169 548 156 0 11 chr15 76674100 76674191 -26820783 + ORR1C2 LTR MaLR 11 100 -278 4 1169 1427 62 11 0 chr15 76674191 76674368 -26820606 + B2_Mm1t SINE B2 1 179 -14 4 1169 296 336 9 28 chr15 76674368 76674383 -26820591 + ORR1C2 LTR MaLR 102 115 -255 4 1169 427 125 276 35 chr15 76674400 76674516 -26820458 + B2_Mm1t SINE B2 48 191 -2 4 1169 1146 138 157 35 chr15 76674534 76674789 -26820185 + ORR1C2 LTR MaLR 99 384 0 4 1169 692 123 40 44 chr15 76674877 76675029 -26819945 - B1_Mus2 SINE Alu -1 148 10 4 1169 336 80 40 0 chr15 76675039 76675089 -26819885 - B3 SINE B2 -163 53 2 4 1169 452 221 2 42 chr15 76675237 76675352 -26819622 - B1F2 SINE Alu -34 115 5 4 1169 244 282 141 33 chr15 76675249 76675370 -26819604 - B4A SINE B4 -88 204 71 4 1169 456 261 118 0 chr15 76675684 76675803 -26819171 - ID_B1 SINE B4 -10 214 82 4 1169 306 365 118 55 chr15 76676451 76676478 -26818496 - HAL1-3A_ME LINE L1 -653 2205 2179 4 1169 1184 48 7 0 chr15 76676478 76676624 -26818350 - B1_Mm SINE Alu 0 147 1 4 1169 306 365 118 55 chr15 76676624 76676816 -26818158 - HAL1-3A_ME LINE L1 -680 2178 1972 4 1169 21 0 0 0 chr15 76676901 76676922 -26818052 + AT_rich Low_complexity Low_complexity 1 21 0 4 146 1039 238 122 49 chr15 76676947 76677129 -26817845 + RMER5 LTR ERV1 39 230 -304 4 1170 4316 21 2 0 chr15 76677129 76677610 -26817364 + LTRIS_Mm LTR ERV1 1 482 0 4 1170 1039 238 122 49 chr15 76677610 76677812 -26817162 + RMER5 LTR ERV1 231 451 -83 4 1170 198 0 0 0 chr15 76678088 76678110 -26816864 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1170 594 236 27 20 chr15 76678151 76678298 -26816676 + ID_B1 SINE B4 76 223 -1 4 1170 1864 167 50 19 chr15 76678481 76678842 -26816132 + ORR1D1 LTR MaLR 1 372 -2 4 1170 299 257 14 0 chr15 76678844 76678914 -26816060 + ORR1D1-int LTR MaLR 1 71 -1299 4 1170 1248 118 43 0 chr15 76679335 76679521 -26815453 + B2_Mm2 SINE B2 2 195 0 4 1170 1094 109 0 0 chr15 76679762 76679909 -26815065 - B1_Mus1 SINE Alu -1 147 1 4 1170 1348 103 0 15 chr15 76679924 76680122 -26814852 - B2_Mm2 SINE B2 0 195 1 4 1170 260 242 93 62 chr15 76681229 76681326 -26813648 + MuLV-int LTR ERV1 2894 2993 -4613 4 1170 623 339 53 0 chr15 76681824 76682013 -26812961 - ID_B1 SINE B4 -4 220 22 4 1170 322 301 41 0 chr15 76681952 76682025 -26812949 - ID4_ SINE ID -2 81 6 4 1170 320 232 60 12 chr15 76682464 76682547 -26812427 + L1M2 LINE L1 3083 3169 -2974 4 1170 479 121 44 78 chr15 76682565 76682655 -26812319 - PB1D9 SINE Alu 0 120 34 4 1170 234 246 16 0 chr15 76683559 76683620 -26811354 - MMSAT4 Satellite Satellite -89 79 18 4 1170 320 302 29 29 chr15 76684358 76684582 -26810392 - MMSAT4 Satellite Satellite 0 224 1 4 1170 245 277 45 67 chr15 76685134 76685223 -26809751 + 4.5SRNA scRNA scRNA 2 88 -6 4 1170 720 194 31 0 chr15 76685146 76685264 -26809710 + B1_Mur2 SINE Alu 17 138 -11 4 1170 189 0 0 0 chr15 76685264 76685285 -26809689 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 1170 192 268 111 44 chr15 76685448 76685538 -26809436 - L2c LINE L2 0 3387 3292 4 1170 266 244 104 30 chr15 76685598 76685694 -26809280 - PB1D10 SINE Alu 0 149 26 4 1170 1256 34 0 0 chr15 76685968 76686115 -26808859 + B1_Mus1 SINE Alu 2 148 0 4 1170 417 70 0 0 chr15 76686116 76686173 -26808801 + (GAA)n Simple_repeat Simple_repeat 2 58 0 4 1170 261 0 0 0 chr15 76686270 76686299 -26808675 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1170 312 247 39 0 chr15 76686597 76686674 -26808300 - L1M5 LINE L1 -2569 3577 3498 4 1170 268 271 140 13 chr15 76686675 76686763 -26808211 - B1_Mm SINE Alu -47 102 3 4 1170 683 225 20 9 chr15 76686824 76686986 -26807988 - B3A SINE B2 -48 168 1 4 1170 831 145 42 42 chr15 76687060 76687226 -26807748 - B2_Mm2 SINE B2 -28 167 2 4 1170 250 247 173 0 chr15 76688080 76688161 -26806813 + ID_B1 SINE B4 130 224 0 4 1170 1195 61 0 7 chr15 76688181 76688330 -26806644 + B1_Mus1 SINE Alu 1 148 0 4 1170 400 258 67 0 chr15 76688379 76688468 -26806506 - B3 SINE B2 -95 121 27 4 1170 222 224 0 0 chr15 76688468 76688490 -26806484 + T-rich Low_complexity Low_complexity 46 67 0 4 1170 1049 64 50 7 chr15 76688490 76688631 -26806343 - B1_Mm SINE Alu 0 147 1 4 1170 222 224 0 0 chr15 76688631 76688675 -26806299 + T-rich Low_complexity Low_complexity 2 45 0 4 1170 264 273 0 0 chr15 76688675 76688730 -26806244 - ID4 SINE ID 0 83 29 4 1170 256 264 88 52 chr15 76688752 76688888 -26806086 + RMER15 LTR ERVL 9 149 -426 4 1170 1456 83 0 10 chr15 76688890 76689084 -26805890 + B2_Mm2 SINE B2 1 192 -3 4 1170 307 207 100 33 chr15 76689474 76689564 -26805410 + RMER15 LTR ERVL 374 469 -106 4 1170 1259 34 0 0 chr15 76690098 76690244 -26804730 - B1_Mus2 SINE Alu -1 146 1 4 1170 406 143 16 0 chr15 76690296 76690359 -26804615 + B1_Mus2 SINE Alu 83 146 -1 4 1170 1222 244 107 60 chr15 76690384 76690439 -26804535 - L1MC1 LINE L1 -431 5902 5845 4 1170 1106 113 53 21 chr15 76690439 76690628 -26804346 + B2_Mm2 SINE B2 1 195 0 4 1170 1222 244 107 60 chr15 76690628 76690642 -26804332 - L1MC1 LINE L1 -489 5844 5836 4 1170 473 233 92 15 chr15 76690642 76690773 -26804201 + B1F2 SINE Alu 1 141 -8 4 1170 1222 230 153 59 chr15 76690773 76691465 -26803509 - L1MC1 LINE L1 -498 5835 5085 4 1170 362 320 65 26 chr15 76691509 76691663 -26803311 + MLT1A LTR MaLR 1 160 -214 4 1170 683 206 20 47 chr15 76691702 76691850 -26803124 + B1_Mur2 SINE Alu 1 144 -5 4 1170 1218 55 0 7 chr15 76692108 76692256 -26802718 - B1_Mus2 SINE Alu 0 147 1 4 1170 672 258 111 65 chr15 76692360 76692774 -26802200 - L1MC1 LINE L1 -1329 4817 4385 4 1170 696 174 43 0 chr15 76692802 76692917 -26802057 + B1_Mus2 SINE Alu 2 121 -26 4 1170 526 148 80 0 chr15 76693006 76693094 -26801880 - B2_Mm2 SINE B2 0 195 101 4 1170 385 293 65 32 chr15 76693116 76693271 -26801703 - L1MC1 LINE L1 -2189 3957 3798 4 1170 703 253 278 13 chr15 76693372 76693757 -26801217 - L1MC1 LINE L1 -2369 3777 3291 4 1170 635 172 60 82 chr15 76693757 76693941 -26801033 - B2_Mm2 SINE B2 -15 180 1 4 1170 186 43 0 0 chr15 76693949 76693972 -26801002 + (TATG)n Simple_repeat Simple_repeat 2 24 0 4 1170 568 159 149 9 chr15 76693972 76694086 -26800888 - B1_Mus2 SINE Alu -6 141 12 4 1170 337 238 53 26 chr15 76694096 76694247 -26800727 - L1MC1 LINE L1 -2848 3298 3144 4 1170 1380 82 16 0 chr15 76694251 76694434 -26800540 - B2_Mm1a SINE B2 -6 187 2 4 1170 781 108 20 48 chr15 76694597 76694743 -26800231 - B1_Mur4 SINE Alu 0 150 9 4 1170 477 76 365 19 chr15 76694774 76694881 -26800093 - B2_Mm2 SINE B2 -5 190 47 4 1170 1225 100 53 0 chr15 76694913 76695083 -26799891 - B2_Mm1t SINE B2 -14 179 1 4 1170 1211 61 0 0 chr15 76695087 76695234 -26799740 - B1_Mus2 SINE Alu 0 147 1 4 1170 270 0 0 0 chr15 76696457 76696487 -26798487 + (TC)n Simple_repeat Simple_repeat 2 31 0 4 1170 387 0 0 0 chr15 76696487 76696529 -26798445 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 1170 313 248 103 8 chr15 76696531 76696657 -26798317 - L1MC1 LINE L1 -3124 3022 2885 4 1170 266 298 106 0 chr15 76696660 76696754 -26798220 + PB1D7 SINE Alu 12 115 -5 4 1170 409 194 17 104 chr15 76697091 76697206 -26797768 - ID_B1 SINE B4 -6 218 114 4 1170 331 262 87 29 chr15 76697296 76697411 -26797563 - PB1D9 SINE Alu 0 120 5 4 1170 286 273 0 116 chr15 76697321 76697433 -26797541 - ID_B1 SINE B4 -57 167 69 4 1170 331 316 108 11 chr15 76697513 76697598 -26797376 + L1MC LINE L1 2148 2243 -3903 4 1170 192 77 0 0 chr15 76697598 76697624 -26797350 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 1170 331 316 108 11 chr15 76697624 76697714 -26797260 + L1MC LINE L1 2244 2339 -3807 4 1170 300 353 97 71 chr15 76697808 76698046 -26796928 + L1M5 LINE L1 2463 2706 -3440 4 1170 916 239 150 87 chr15 76698046 76698380 -26796594 + ORR1E LTR MaLR 1 355 -4 4 1170 324 203 60 15 chr15 76698380 76698523 -26796451 + L1M5 LINE L1 2695 2844 -3302 4 1170 1216 48 7 0 chr15 76698532 76698678 -26796296 + B1_Mus1 SINE Alu 2 148 0 4 1170 544 222 68 100 chr15 76698833 76699023 -26795951 + B3A SINE B2 3 186 -9 4 1170 523 224 0 30 chr15 76699395 76699406 -26795568 + ID SINE ID 76 83 -141 4 1170 490 198 65 19 chr15 76699406 76699514 -26795460 + B1F2 SINE Alu 3 115 -34 4 1170 1479 73 16 0 chr15 76699573 76699764 -26795210 + B2_Mm2 SINE B2 1 194 -1 4 1170 329 324 78 35 chr15 76699772 76699887 -26795087 + PB1 SINE Alu 1 120 -7 4 1170 410 270 2 28 chr15 76702070 76702177 -26792797 + PB1D10 SINE Alu 2 105 -12 4 1170 216 0 0 0 chr15 76702177 76702201 -26792773 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 4 1170 262 307 24 95 chr15 76702201 76702219 -26792755 + B1_Mur4 SINE Alu 102 118 -32 4 1170 298 214 21 116 chr15 76702203 76702298 -26792676 + MT2B LTR ERVL 172 257 -344 4 1170 727 150 42 0 chr15 76702218 76702338 -26792636 + B1_Mur2 SINE Alu 25 149 0 4 1170 180 0 0 0 chr15 76702757 76702777 -26792197 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1170 897 243 48 5 chr15 76702855 76703062 -26791912 + B3 SINE B2 1 216 0 4 1170 1094 64 0 0 chr15 76703643 76703783 -26791191 - B1_Mus2 SINE Alu 0 147 8 4 1170 225 0 0 0 chr15 76704164 76704189 -26790785 + (TC)n Simple_repeat Simple_repeat 2 26 0 4 1170 640 82 39 48 chr15 76704195 76704298 -26790676 - B1_Mur4 SINE Alu -1 149 48 4 1170 745 126 0 18 chr15 76704328 76704441 -26790533 + PB1D9 SINE Alu 1 111 -9 4 1170 432 0 0 0 chr15 76704441 76704489 -26790485 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 1170 3003 120 5 16 chr15 76704493 76704941 -26790033 - RLTR13C1 LTR ERVK -477 506 64 4 1170 1157 75 0 7 chr15 76704949 76705097 -26789877 - B1_Mus2 SINE Alu 0 147 1 5 1170 234 0 0 0 chr15 76705181 76705207 -26789767 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 1170 450 0 0 0 chr15 76705409 76705459 -26789515 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1170 787 79 0 0 chr15 76705499 76705600 -26789374 + B2_Mm2 SINE B2 4 104 -91 5 1170 1271 41 0 0 chr15 76705769 76705916 -26789058 + B1_Mus2 SINE Alu 1 147 0 5 1170 444 147 0 0 chr15 76705916 76705991 -26788983 + (A)n Simple_repeat Simple_repeat 1 75 0 5 1170 244 252 16 25 chr15 76706393 76706409 -26788565 + ORR1B1-int LTR MaLR 634 648 -861 5 1170 1113 56 14 0 chr15 76706409 76706553 -26788421 + B1_Mm SINE Alu 2 147 0 5 1170 204 67 0 0 chr15 76706554 76706584 -26788390 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 5 1170 429 286 48 53 chr15 76706584 76706799 -26788175 + B3A SINE B2 1 211 -5 5 1170 1033 159 58 77 chr15 76706817 76706897 -26788077 + RMER10A LTR ERVL 189 263 -179 5 1170 5468 163 72 39 chr15 76706897 76707975 -26786999 + RLTR13D3 LTR ERVK 1 1114 0 5 1170 1033 159 58 77 chr15 76707975 76708153 -26786821 + RMER10A LTR ERVL 264 441 -1 5 1170 731 139 0 58 chr15 76708256 76708447 -26786527 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1170 214 169 31 0 chr15 76708474 76708539 -26786435 + (CA)n Simple_repeat Simple_repeat 2 68 0 5 1170 1237 47 0 0 chr15 76708855 76709003 -26785971 - B1_Mus1 SINE Alu 0 148 1 5 1170 1233 54 0 0 chr15 76709069 76709216 -26785758 - B1_Mus1 SINE Alu -1 147 1 5 1170 1193 68 0 0 chr15 76709232 76709379 -26785595 - B1_Mus2 SINE Alu 0 147 1 5 1170 240 111 0 0 chr15 76710772 76710808 -26784166 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 5 1170 588 162 8 3 chr15 76710808 76710907 -26784067 - B1_Mus2 SINE Alu 0 147 18 5 1170 257 0 30 0 chr15 76710913 76710946 -26784028 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1170 420 225 9 9 chr15 76711539 76711651 -26783323 + MurSatRep1 Unknown Unknown 611 722 -1415 5 1170 207 133 0 0 chr15 76711728 76711773 -26783201 + (TGGG)n Simple_repeat Simple_repeat 3 47 0 5 1170 509 160 20 0 chr15 76711984 76712084 -26782890 + GA-rich Low_complexity Low_complexity 3 104 0 5 1170 1066 76 14 0 chr15 76712636 76712780 -26782194 + B1_Mus2 SINE Alu 2 147 0 5 1170 214 117 0 48 chr15 76712784 76712847 -26782127 + A-rich Low_complexity Low_complexity 5 64 0 5 1170 195 42 0 0 chr15 76712871 76712895 -26782079 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 5 1170 24 0 0 0 chr15 76713118 76713142 -26781832 + AT_rich Low_complexity Low_complexity 1 24 0 5 1170 474 120 0 0 chr15 76713157 76713232 -26781742 + (TA)n Simple_repeat Simple_repeat 1 75 0 5 1170 303 175 0 0 chr15 76713421 76713478 -26781496 + (CATA)n Simple_repeat Simple_repeat 1 57 0 5 1170 910 119 0 29 chr15 76713523 76713661 -26781313 - B1_Mus2 SINE Alu -9 138 5 5 1170 243 0 0 0 chr15 76713661 76713688 -26781286 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1170 1284 66 58 42 chr15 76713694 76713884 -26781090 - B2_Mm2 SINE B2 -2 193 1 5 1170 323 283 94 50 chr15 76714114 76714274 -26780700 - RLTR13C2 LTR ERVK 0 808 642 5 1170 236 191 0 0 chr15 76714517 76714559 -26780415 - B2_Mm2 SINE B2 -153 42 1 5 1170 226 270 132 22 chr15 76714947 76715038 -26779936 - RLTR13C2 LTR ERVK -1013 101 1 5 1170 1023 133 0 0 chr15 76715193 76715358 -26779616 + (TC)n Simple_repeat Simple_repeat 2 166 0 5 1170 1215 55 0 0 chr15 76715358 76715503 -26779471 - B1_Mus2 SINE Alu -2 145 1 5 1170 524 184 51 26 chr15 76715740 76715857 -26779117 - PB1D9 SINE Alu 0 120 1 5 1170 355 152 0 70 chr15 76715861 76715932 -26779042 - B2_Mm2 SINE B2 -18 177 112 5 1170 27 23 0 22 chr15 76715953 76715978 -26778996 + AT_rich Low_complexity Low_complexity 1 25 0 5 1170 1236 113 21 0 chr15 76715978 76716164 -26778810 - B2_Mm1t SINE B2 -2 191 2 5 1170 27 23 0 22 chr15 76716164 76716183 -26778791 + AT_rich Low_complexity Low_complexity 1 19 0 5 1170 207 0 0 0 chr15 76716334 76716357 -26778617 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5 1170 483 190 99 10 chr15 76716357 76716453 -26778521 - B1_Mus1 SINE Alu -1 147 42 5 1170 513 271 23 74 chr15 76716455 76716670 -26778304 - ID_B1 SINE B4 -19 205 2 5 1170 1527 58 11 0 chr15 76716729 76716918 -26778056 - B2_Mm1t SINE B2 -1 192 2 5 1170 603 223 71 7 chr15 76716981 76717121 -26777853 - B1_Mur2 SINE Alu 0 149 1 5 1170 1223 61 0 0 chr15 76717217 76717364 -26777610 + B1_Mus1 SINE Alu 2 148 0 5 1170 698 250 70 5 chr15 76717590 76717775 -26777199 + RMER30 DNA MER1_type 5 201 -1 5 1170 432 216 366 0 chr15 76717864 76718017 -26776957 - B3 SINE B2 -6 210 2 5 1170 799 147 31 8 chr15 76718160 76718290 -26776684 - B1_Mur4 SINE Alu -1 149 17 5 1170 313 234 19 130 chr15 76718204 76718312 -26776662 - MT2B LTR ERVL -344 257 162 5 1170 1300 96 16 16 chr15 76719234 76719425 -26775549 + B2_Mm2 SINE B2 2 192 -3 5 1170 1267 41 0 0 chr15 76719430 76719577 -26775397 + B1_Mus1 SINE Alu 2 148 0 5 1170 591 318 112 14 chr15 76719578 76719902 -26775072 - MTD LTR MaLR -31 388 1 5 1170 354 289 39 39 chr15 76720828 76721186 -26773788 + MMSAT4 Satellite Satellite 1 358 -5 5 1170 356 279 59 59 chr15 76721476 76721693 -26773281 + MMSAT4 Satellite Satellite 1 217 -1 5 1170 373 308 23 23 chr15 76721728 76721945 -26773029 + MMSAT4 Satellite Satellite 1 217 -5 5 1170 310 226 0 0 chr15 76722130 76722192 -26772782 + MMSAT4 Satellite Satellite 106 167 -1 5 1170 1309 212 56 59 chr15 76722261 76722636 -26772338 - ORR1D1 LTR MaLR 0 374 1 5 1170 184 267 33 16 chr15 76722834 76722895 -26772079 + L3 LINE CR1 106 167 -4322 5 1170 453 240 64 138 chr15 76722910 76722986 -26771988 - ORR1D1-int LTR MaLR -859 511 446 5 1170 1093 117 36 26 chr15 76722986 76723179 -26771795 - B2_Mm2 SINE B2 0 195 1 5 1170 1232 84 90 0 chr15 76723179 76723357 -26771617 - B2_Mm2 SINE B2 -1 194 1 5 1170 453 240 64 138 chr15 76723357 76723482 -26771492 - ORR1D1-int LTR MaLR -925 445 325 5 1170 1025 200 66 5 chr15 76723505 76723701 -26771273 - B3 SINE B2 -3 213 6 5 1170 425 177 25 0 chr15 76723709 76723788 -26771186 - ORR1D1-int LTR MaLR -1046 324 244 5 1170 410 228 138 21 chr15 76723823 76724011 -26770963 - RMER17C LTR ERVK -139 271 62 5 1170 349 261 169 15 chr15 76723987 76724123 -26770851 - ORR1D1-int LTR MaLR -1308 272 116 5 1170 1305 27 0 0 chr15 76724137 76724283 -26770691 + B1_Mm SINE Alu 2 147 0 5 1170 216 86 0 0 chr15 76724283 76724318 -26770656 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 5 1170 833 80 312 0 chr15 76724327 76724465 -26770509 - B2_Mm2 SINE B2 -14 181 1 5 1170 876 145 27 7 chr15 76724502 76724648 -26770326 - B1_Mur3 SINE Alu 0 149 1 5 1170 303 348 14 7 chr15 76724724 76724863 -26770111 - ERVL-E-int LTR ERVL -2365 3302 3163 5 1170 204 235 0 0 chr15 76724865 76724916 -26770058 + T-rich Low_complexity Low_complexity 1 51 0 5 1170 433 220 113 64 chr15 76724950 76725091 -26769883 - B1F2 SINE Alu 0 149 2 5 1170 256 256 37 37 chr15 76725514 76725595 -26769379 + ID4_ SINE ID 3 83 0 5 1170 583 191 98 15 chr15 76725617 76725703 -26769271 + B1_Mur3 SINE Alu 5 90 -59 5 1170 288 0 0 0 chr15 76725703 76725735 -26769239 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 1170 583 191 98 15 chr15 76725735 76725781 -26769193 + B1_Mur3 SINE Alu 91 147 -2 5 1170 574 252 5 23 chr15 76725781 76725926 -26769048 + ID_B1 SINE B4 76 215 -77 5 1170 1523 68 16 0 chr15 76725950 76726142 -26768832 - B2_Mm2 SINE B2 0 195 1 5 1170 1304 39 0 0 chr15 76726207 76726361 -26768613 + B2_Mm1a SINE B2 2 155 -38 5 1170 342 0 0 0 chr15 76726367 76726405 -26768569 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 5 1170 601 251 19 14 chr15 76726407 76726617 -26768357 - Lx9 LINE L1 0 7644 7434 5 1170 1280 189 8 24 chr15 76726617 76726867 -26768107 + MTC LTR MaLR 176 421 0 5 1170 728 230 0 0 chr15 76726868 76727020 -26767954 - Lx9 LINE L1 -532 7112 6961 5 1170 595 217 67 40 chr15 76727089 76727238 -26767736 + RSINE1 SINE B4 13 165 0 5 1170 289 316 82 77 chr15 76727236 76727271 -26767703 + B4A SINE B4 42 75 -217 5 1170 1309 82 27 5 chr15 76727271 76727456 -26767518 + B2_Mm1t SINE B2 1 189 -4 5 1170 289 316 82 77 chr15 76727456 76727602 -26767372 + B4A SINE B4 76 224 -68 5 1170 841 155 0 0 chr15 76727476 76727605 -26767369 + B1_Mus1 SINE Alu 20 148 0 5 1170 2871 17 8 83 chr15 76727625 76727872 -26767102 - ORR1A0 LTR MaLR 0 346 126 5 1170 1240 34 0 13 chr15 76727872 76728021 -26766953 - B1_Mm SINE Alu 0 147 1 5 1170 2871 17 8 83 chr15 76728021 76728147 -26766827 - ORR1A0 LTR MaLR -221 125 1 5 1170 428 209 0 62 chr15 76728251 76728348 -26766626 + B1_Mur2 SINE Alu 43 134 -16 5 1170 1821 173 189 14 chr15 76728348 76728776 -26766198 - RLTR19C LTR ERVK 0 506 4 5 1170 1176 69 0 0 chr15 76728802 76728947 -26766027 + B1_Mus2 SINE Alu 2 146 -1 5 1170 247 342 0 0 chr15 76728988 76729064 -26765910 + (CA)n Simple_repeat Simple_repeat 1 76 0 5 1170 341 327 66 76 chr15 76729126 76729414 -26765560 + MLT1C LTR MaLR 4 288 -179 5 1170 273 29 0 0 chr15 76729515 76729549 -26765425 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1170 655 217 17 0 chr15 76729549 76729664 -26765310 - PB1D9 SINE Alu -3 117 1 5 1170 260 301 25 49 chr15 76729689 76729807 -26765167 - B1F SINE Alu -24 125 3 5 1170 189 0 0 0 chr15 76729972 76729993 -26764981 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 5 1170 433 153 211 26 chr15 76729993 76730098 -26764876 - B1_Mur2 SINE Alu -13 136 9 5 1170 250 219 131 66 chr15 76729997 76730119 -26764855 - MT2B2 LTR ERVL -302 282 153 5 1170 214 275 0 0 chr15 76731929 76731969 -26763005 - L2a LINE L2 -92 3334 3295 5 1170 21 57 0 0 chr15 76732027 76732062 -26762912 + AT_rich Low_complexity Low_complexity 1 35 0 5 1170 739 222 57 72 chr15 76732074 76732283 -26762691 + B3 SINE B2 2 207 -9 5 1170 920 250 29 0 chr15 76732531 76732735 -26762239 + B3 SINE B2 1 210 -6 5 1170 671 196 58 7 chr15 76732752 76732891 -26762083 + B1_Mur4 SINE Alu 2 147 -3 5 1170 1031 87 16 21 chr15 76732910 76733074 -26761900 + B2_Mm2 SINE B2 2 179 -14 6 1170 1159 90 0 0 chr15 76733494 76733639 -26761335 - B1_Mus2 SINE Alu -1 146 2 6 1170 352 159 14 14 chr15 76734073 76734143 -26760831 - B1_Mur3 SINE Alu -13 136 67 6 1170 270 305 83 25 chr15 76735638 76735759 -26759215 + B3 SINE B2 89 216 0 6 1170 268 172 85 17 chr15 76736848 76736907 -26758067 - B1_Mur4 SINE Alu -10 140 78 6 1170 1123 78 52 0 chr15 76737683 76737836 -26757138 + B2_Mm2 SINE B2 2 162 -33 6 1170 283 203 0 86 chr15 76738296 76738366 -26756608 + B1_Mus1 SINE Alu 1 64 -84 6 1170 224 322 64 43 chr15 76738366 76738383 -26756591 + B4 SINE B4 103 174 -118 6 1170 239 171 143 95 chr15 76738707 76738791 -26756183 + B2_Mm2 SINE B2 97 184 -11 6 1170 1342 62 6 11 chr15 76738811 76738992 -26755982 + B2_Mm1a SINE B2 11 190 -3 6 1170 404 228 119 34 chr15 76739120 76739238 -26755736 - ID_B1 SINE B4 -7 217 90 6 1170 740 239 26 6 chr15 76739346 76739502 -26755472 - RSINE1 SINE B4 -4 161 3 6 1170 991 242 183 37 chr15 76739580 76739651 -26755323 + MTD LTR MaLR 43 113 -306 6 1170 1556 43 11 5 chr15 76739651 76739839 -26755135 - B2_Mm1t SINE B2 -4 189 1 6 1170 991 242 183 37 chr15 76739839 76740089 -26754885 + MTD LTR MaLR 114 411 -8 6 1170 289 218 66 63 chr15 76740113 76740215 -26754759 + MTC-int LTR MaLR 87 187 -1183 6 1170 379 106 29 29 chr15 76740223 76740291 -26754683 - B1_Mur4 SINE Alu 0 150 83 6 1170 683 79 0 47 chr15 76740292 76740375 -26754599 + B2_Mm2 SINE B2 89 168 -27 6 1170 1339 76 27 0 chr15 76740375 76740559 -26754415 - B2_Mm1a SINE B2 -3 190 2 6 1170 683 79 0 47 chr15 76740559 76740581 -26754393 + B2_Mm2 SINE B2 169 189 -6 6 1170 309 109 0 0 chr15 76740659 76740705 -26754269 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 1170 434 231 0 13 chr15 76740718 76740797 -26754177 - RSINE1 SINE B4 -38 127 50 6 1170 232 317 53 60 chr15 76741342 76741493 -26753481 - MMSAT4 Satellite Satellite -5 163 14 6 1170 300 301 14 14 chr15 76741505 76741643 -26753331 - MMSAT4 Satellite Satellite 0 168 31 6 1170 410 218 35 52 chr15 76742635 76742751 -26752223 + PB1D10 SINE Alu 2 115 -2 6 1170 1143 82 0 7 chr15 76742757 76742904 -26752070 + B1_Mus1 SINE Alu 2 147 -1 6 1170 845 159 180 37 chr15 76743912 76744101 -26750873 - B3 SINE B2 0 216 1 6 1170 1268 34 0 0 chr15 76744199 76744346 -26750628 + B1_Mm SINE Alu 1 147 0 6 1170 243 0 0 0 chr15 76744346 76744373 -26750601 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1170 264 59 0 0 chr15 76744426 76744460 -26750514 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1170 303 352 77 0 chr15 76745766 76745948 -26749026 - L1M4 LINE L1 -1778 4368 4173 6 1170 257 296 17 34 chr15 76745985 76746104 -26748870 - L1MC LINE L1 -2117 4029 3913 6 1170 233 29 29 0 chr15 76746174 76746208 -26748766 + (TTG)n Simple_repeat Simple_repeat 2 36 0 6 1170 1067 65 29 7 chr15 76746208 76746340 -26748634 - B1_Mus2 SINE Alu -7 140 5 6 1170 718 176 14 34 chr15 76746408 76746555 -26748419 - B1_Mur4 SINE Alu -5 145 2 6 1170 1102 153 76 10 chr15 76746809 76747007 -26747967 - B3 SINE B2 0 216 6 6 1170 351 0 0 0 chr15 76747197 76747236 -26747738 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 1170 303 266 39 39 chr15 76748057 76748186 -26746788 - MurSatRep1 Unknown Unknown -1391 746 618 6 1170 393 253 0 0 chr15 76748747 76748830 -26746144 + B1_Mur4 SINE Alu 41 123 -27 6 1170 1432 75 21 0 chr15 76748858 76749046 -26745928 + B2_Mm2 SINE B2 1 192 -3 6 1170 264 273 0 38 chr15 76750037 76750117 -26744857 + B1F2 SINE Alu 22 98 -51 6 1170 201 289 0 0 chr15 76750134 76750179 -26744795 + G-rich Low_complexity Low_complexity 1 45 0 6 1170 1694 26 0 0 chr15 76750562 76750754 -26744220 + B2_Mm1a SINE B2 1 192 -1 6 1170 400 289 11 0 chr15 76750798 76750888 -26744086 + RSINE1 SINE B4 4 94 -71 6 1170 192 40 0 0 chr15 76750943 76750968 -26744006 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1170 484 278 83 0 chr15 76750976 76751084 -26743890 + RSINE1 SINE B4 3 119 -46 6 1170 342 137 0 0 chr15 76751881 76751932 -26743042 - URR1B DNA MER1_type -2 223 173 6 1170 450 0 0 0 chr15 76751995 76752045 -26742929 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 6 1170 1042 106 7 7 chr15 76752157 76752300 -26742674 - B1_Mus2 SINE Alu 0 147 5 6 1170 228 276 86 0 chr15 76752327 76752385 -26742589 + PB1D9 SINE Alu 58 120 0 6 1170 391 246 18 18 chr15 76752634 76752746 -26742228 + PB1D10 SINE Alu 1 112 -5 6 1170 1543 58 5 0 chr15 76753090 76753281 -26741693 + B2_Mm1a SINE B2 2 193 0 6 1170 857 155 0 60 chr15 76753378 76753529 -26741445 + B1_Mur4 SINE Alu 2 143 -7 6 1170 1049 198 11 6 chr15 76753605 76753788 -26741186 + B3 SINE B2 28 211 -5 6 1170 213 163 0 0 chr15 76754185 76754234 -26740740 + A-rich Low_complexity Low_complexity 1 49 0 6 1170 253 274 33 77 chr15 76754804 76754895 -26740079 - RSINE1 SINE B4 -4 161 75 6 1170 21 0 0 0 chr15 76754895 76754916 -26740058 + GC_rich Low_complexity Low_complexity 1 21 0 6 1170 308 139 0 0 chr15 76754916 76754959 -26740015 - B4 SINE B4 -78 214 172 6 1170 1038 181 56 42 chr15 76755034 76755247 -26739727 + B3 SINE B2 1 216 0 6 1170 343 294 48 27 chr15 76756308 76756455 -26738519 - L1M5 LINE L1 -568 5611 5462 6 1170 1497 39 44 0 chr15 76756455 76756636 -26738338 + B2_Mm2 SINE B2 1 189 -6 6 1170 651 359 17 52 chr15 76756649 76756940 -26738034 + B4 SINE B4 2 282 -10 6 1170 515 151 0 95 chr15 76757090 76757185 -26737789 + B1_Mur3 SINE Alu 41 126 -23 6 1170 917 53 0 0 chr15 76757322 76757436 -26737538 - B1_Mm SINE Alu 0 147 34 6 1170 688 75 12 7 chr15 76757443 76757559 -26737415 - B2_Mm1t SINE B2 0 193 1 6 1170 352 290 19 29 chr15 76757650 76757753 -26737221 - LTR52 LTR ERVL -92 329 228 6 1170 291 202 270 10 chr15 76757770 76757870 -26737104 + MT2A LTR ERVL 3 128 -405 6 1170 931 267 121 7 chr15 76757794 76758092 -26736882 + MTE2b LTR MaLR 48 379 0 6 1170 283 227 153 111 chr15 76758123 76758267 -26736707 - LTR52 LTR ERVL -258 163 14 6 1170 805 212 77 15 chr15 76758268 76758464 -26736510 + B3 SINE B2 1 208 -8 6 1170 736 247 34 7 chr15 76758495 76758642 -26736332 + B3A SINE B2 10 160 -38 6 1170 423 0 0 0 chr15 76758646 76758693 -26736281 + (TC)n Simple_repeat Simple_repeat 1 47 0 6 1170 558 43 0 0 chr15 76758693 76758761 -26736213 + (CA)n Simple_repeat Simple_repeat 1 69 0 6 1170 1123 77 0 7 chr15 76758783 76758927 -26736047 + B1_Mus2 SINE Alu 3 145 -2 6 1170 993 211 6 0 chr15 76759090 76759256 -26735718 + B3 SINE B2 1 167 -49 6 1170 1078 169 209 5 chr15 76759248 76759468 -26735506 + MTB_Mm LTR MaLR 143 407 0 6 1170 380 323 0 39 chr15 76759468 76759571 -26735403 - PB1D10 SINE Alu -17 100 2 6 1170 1364 96 11 0 chr15 76759579 76759767 -26735207 - B2_Mm1t SINE B2 -3 190 1 6 1170 480 256 71 28 chr15 76759812 76759953 -26735021 + RSINE1 SINE B4 2 148 -17 6 1170 262 253 45 11 chr15 76760069 76760157 -26734817 + L1MC4 LINE L1 7491 7581 -461 6 1170 1131 75 0 13 chr15 76760421 76760570 -26734404 + B1_Mm SINE Alu 1 147 0 6 1170 1220 88 49 6 chr15 76760586 76760769 -26734205 + B2_Mm1t SINE B2 2 192 -1 6 1170 1234 113 49 0 chr15 76761228 76761413 -26733561 + B2_Mm2 SINE B2 2 195 0 6 1170 467 73 15 0 chr15 76761413 76761481 -26733493 + (GAAA)n Simple_repeat Simple_repeat 2 70 0 6 1170 4410 30 0 6 chr15 76761545 76762051 -26732923 + RLTR1C LTR ERV1 1 503 0 6 1170 468 0 0 0 chr15 76762579 76762631 -26732343 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1170 881 98 34 6 chr15 76762907 76763082 -26731892 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 1170 228 167 0 0 chr15 76764569 76764611 -26730363 - MurSatRep1 Unknown Unknown -346 1791 1750 6 1170 315 289 41 41 chr15 76764723 76764940 -26730034 - MMSAT4 Satellite Satellite -5 217 1 6 1170 1602 36 0 15 chr15 76765238 76765434 -26729540 - B2_Mm1a SINE B2 0 193 1 6 1170 201 226 221 21 chr15 76766225 76766320 -26728654 + L2 LINE L2 2527 2640 -779 6 1170 246 216 21 50 chr15 76766321 76766462 -26728512 + (TATAA)n Simple_repeat Simple_repeat 4 140 0 6 1170 522 250 31 15 chr15 76766667 76766797 -26728177 - B3 SINE B2 -11 205 74 6 1170 252 326 20 31 chr15 76766769 76766867 -26728107 + B1F2 SINE Alu 31 127 -22 6 1170 752 173 36 7 chr15 76767052 76767192 -26727782 + B1_Mur2 SINE Alu 4 147 -2 6 1170 252 0 0 0 chr15 76767284 76767312 -26727662 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 6 1170 503 261 42 42 chr15 76767332 76767476 -26727498 - B1F2 SINE Alu -1 148 5 6 1170 185 94 0 30 chr15 76767486 76767519 -26727455 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 6 1170 760 263 25 40 chr15 76767527 76767729 -26727245 - B3 SINE B2 -15 201 3 6 1170 345 159 16 0 chr15 76767799 76767862 -26727112 + URR1A DNA MER1_type 83 146 -80 6 1170 1196 68 0 0 chr15 76767890 76768036 -26726938 + B1_Mm SINE Alu 2 147 0 6 1170 198 103 0 0 chr15 76768040 76768069 -26726905 + (GAAA)n Simple_repeat Simple_repeat 2 30 0 6 1170 448 277 222 19 chr15 76768402 76768564 -26726410 - Tigger5 DNA MER2_type -2166 240 46 6 1170 342 0 0 0 chr15 76768597 76768635 -26726339 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 6 1170 1202 28 0 46 chr15 76768636 76768788 -26726186 + B1_Mus1 SINE Alu 3 147 -1 7 1170 541 290 12 1 chr15 76768871 76769063 -26725911 - L1MB4 LINE L1 -512 6269 6078 7 1170 348 180 109 0 chr15 76769073 76769158 -26725816 - PB1D10 SINE Alu 0 127 13 7 1170 767 278 207 27 chr15 76769170 76769688 -26725286 - L1MB4 LINE L1 -1164 5583 4973 7 1170 1463 84 5 0 chr15 76769735 76769926 -26725048 - B2_Mm1a SINE B2 0 193 2 7 1170 545 342 73 69 chr15 76769957 76770170 -26724804 - MLT1A LTR MaLR -72 302 88 7 1170 563 48 0 12 chr15 76770170 76770255 -26724719 - L1Md_F2 LINE L1 0 6582 6499 7 1170 545 342 73 69 chr15 76770255 76770302 -26724672 - MLT1A LTR MaLR -287 87 42 7 1170 1037 73 0 35 chr15 76770335 76770477 -26724497 - B1_Mus1 SINE Alu 0 148 12 7 1170 663 303 155 36 chr15 76770877 76771575 -26723399 - L1MB4 LINE L1 -5749 858 78 7 1170 945 228 9 19 chr15 76771654 76771864 -26723110 - B3 SINE B2 -4 212 5 7 1170 1658 52 0 0 chr15 76772889 76773082 -26721892 + B2_Mm1t SINE B2 1 193 0 7 1170 1326 99 16 0 chr15 76773934 76774116 -26720858 - B2_Mm1t SINE B2 -8 185 1 7 1170 785 167 0 0 chr15 76774117 76774237 -26720737 + B1_Mus1 SINE Alu 27 146 -2 7 1170 950 123 0 0 chr15 76774495 76774633 -26720341 - B1_Mus1 SINE Alu -8 140 3 7 1170 303 86 208 16 chr15 76774774 76774845 -26720129 - MTD LTR MaLR -334 87 4 7 1170 1519 202 122 101 chr15 76774845 76775510 -26719464 - MTC-int LTR MaLR -188 1070 260 7 1170 1059 58 73 0 chr15 76775510 76775647 -26719327 - B1_Mm SINE Alu 0 147 1 7 1170 1519 180 163 92 chr15 76775647 76775749 -26719225 - MTC-int LTR MaLR -1242 267 165 7 1170 461 192 95 9 chr15 76775759 76775801 -26719173 + MTD LTR MaLR 306 349 -70 7 1170 270 0 0 0 chr15 76775801 76775831 -26719143 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 7 1170 461 192 95 9 chr15 76775831 76775893 -26719081 + MTD LTR MaLR 350 418 -1 7 1170 338 264 57 0 chr15 76776255 76776361 -26718613 + PB1D10 SINE Alu 1 112 -5 7 1170 226 250 108 113 chr15 76776512 76776697 -26718277 - RLTR20A LTR ERVK -299 242 59 7 1170 3708 41 10 1 chr15 76776989 76777812 -26717162 + MT-int LTR MaLR 55 1016 -82 7 1170 3135 23 0 0 chr15 76777812 76778161 -26716813 + MERVL-int LTR ERVL 4776 5124 -361 7 1170 636 232 0 0 chr15 76778165 76778290 -26716684 - ORR1D-int LTR MaLR -205 1165 1041 7 1170 957 218 146 29 chr15 76778322 76778596 -26716378 + MT2A LTR ERVL 5 310 -223 7 1170 342 0 0 0 chr15 76778607 76778645 -26716329 + (CCCCG)n Simple_repeat Simple_repeat 4 41 0 7 1170 677 142 49 16 chr15 76779676 76779798 -26715176 - B1_Mm SINE Alu -19 128 3 7 1170 501 178 25 0 chr15 76779847 76779965 -26715009 + CT-rich Low_complexity Low_complexity 1 121 0 7 1170 3241 123 170 29 chr15 76781460 76782120 -26712854 - RMER6A LTR ERVK 0 756 4 7 1170 181 338 187 27 chr15 76782271 76782496 -26712478 + L2 LINE L2 2327 2587 -832 7 1170 429 94 16 0 chr15 76782543 76782607 -26712367 - B2_Mm2 SINE B2 -129 66 2 7 1170 250 172 28 75 chr15 76782637 76782744 -26712230 + (TTAGGG)n Simple_repeat Simple_repeat 1 102 0 7 1170 682 86 259 0 chr15 76783535 76783651 -26711323 + B1_Mus1 SINE Alu 2 147 -1 7 1170 1146 75 0 7 chr15 76783941 76784088 -26710886 + B1_Mus1 SINE Alu 2 147 -1 7 1170 344 167 14 0 chr15 76784098 76784170 -26710804 + GA-rich Low_complexity Low_complexity 2 74 0 7 1170 1157 84 0 0 chr15 76784218 76784361 -26710613 + B1_Mus1 SINE Alu 1 143 -5 7 1170 444 19 0 0 chr15 76784386 76784439 -26710535 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1170 1194 61 7 0 chr15 76784480 76784627 -26710347 - B1_Mus1 SINE Alu 0 148 1 7 1170 198 71 0 0 chr15 76785110 76785138 -26709836 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 7 1170 276 172 0 0 chr15 76786300 76786358 -26708616 + CT-rich Low_complexity Low_complexity 3 60 0 7 1170 747 211 43 5 chr15 76786360 76786386 -26708588 - B2_Mm2 SINE B2 0 195 170 7 1170 288 0 0 0 chr15 76786386 76786418 -26708556 + (ATTG)n Simple_repeat Simple_repeat 1 32 0 7 1170 747 211 43 5 chr15 76786418 76786577 -26708397 - B2_Mm2 SINE B2 -26 169 4 7 1170 740 157 70 14 chr15 76786843 76786985 -26707989 + B1_Mur4 SINE Alu 1 150 0 7 1170 260 168 35 17 chr15 76786988 76787103 -26707871 + A-rich Low_complexity Low_complexity 2 118 0 7 1170 1111 176 40 128 chr15 76787450 76787769 -26707205 - RMER19C LTR ERVK -430 307 1 7 1170 1918 148 74 111 chr15 76787769 76787858 -26707116 - RLTR19 LTR ERVK -73 426 353 7 1170 1210 68 0 0 chr15 76787858 76788005 -26706969 - B1_Mus2 SINE Alu 0 147 1 7 1170 1119 101 89 0 chr15 76788007 76788186 -26706788 - B2_Mm2 SINE B2 0 195 1 7 1170 1918 148 74 111 chr15 76788186 76788527 -26706447 - RLTR19 LTR ERVK -147 352 9 7 1170 357 322 8 0 chr15 76788565 76788683 -26706291 + MER20B DNA MER1_type 637 755 -28 7 1170 210 105 0 0 chr15 76788776 76788814 -26706160 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 7 1170 684 328 87 55 chr15 76788832 76788982 -26705992 + L1M4 LINE L1 96 241 -6301 7 1170 2245 104 28 12 chr15 76788982 76789304 -26705670 + ORR1A4 LTR MaLR 3 329 0 7 1170 684 328 87 55 chr15 76789304 76789772 -26705202 + L1M4 LINE L1 242 734 -5808 7 1170 198 0 0 0 chr15 76789794 76789816 -26705158 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 7 1170 485 76 0 0 chr15 76789818 76789884 -26705090 - B1_Mur4 SINE Alu -1 149 84 7 1170 1857 116 89 0 chr15 76789889 76790182 -26704792 - ORR1A2 LTR MaLR -8 319 1 7 1170 408 179 0 15 chr15 76790187 76790255 -26704719 - B1_Mur4 SINE Alu -68 82 16 7 1170 1198 70 0 0 chr15 76790259 76790402 -26704572 + B1_Mus2 SINE Alu 5 147 0 7 1170 7465 50 5 0 chr15 76790409 76791297 -26703677 + RLTR13B1 LTR ERVK 1 892 -1 7 1170 272 0 79 0 chr15 76791297 76791335 -26703639 + (CAAAA)n Simple_repeat Simple_repeat 5 45 0 7 1170 411 288 147 69 chr15 76791355 76791776 -26703198 + L1M4 LINE L1 1592 2045 -4601 7 1170 21 0 0 0 chr15 76791776 76791797 -26703177 + AT_rich Low_complexity Low_complexity 1 21 0 7 1170 591 218 17 46 chr15 76792099 76792272 -26702702 + RNLTR23 LTR ERVK 475 642 0 7 1170 572 268 37 43 chr15 76792310 76792474 -26702500 + B3A SINE B2 36 198 0 7 1170 561 289 0 82 chr15 76792870 76793017 -26701957 - RSINE1 SINE B4 -3 162 28 7 1170 308 340 89 30 chr15 76793026 76793229 -26701745 + L1M4 LINE L1 1978 2192 -4453 7 1170 1525 58 16 0 chr15 76793229 76793418 -26701556 + B2_Mm2 SINE B2 1 192 -3 7 1170 1222 122 11 11 chr15 76793837 76794027 -26700947 - B2_Mm2 SINE B2 -5 190 1 7 1170 294 235 14 22 chr15 76794080 76794219 -26700755 + (CATATA)n Simple_repeat Simple_repeat 6 143 0 7 1170 181 284 15 7 chr15 76794282 76794417 -26700557 + (CATATA)n Simple_repeat Simple_repeat 6 141 0 7 1170 227 321 0 13 chr15 76794425 76794504 -26700470 + (CATA)n Simple_repeat Simple_repeat 2 79 0 7 1170 239 256 0 43 chr15 76794508 76794692 -26700282 + (CATATA)n Simple_repeat Simple_repeat 2 177 0 7 1170 192 235 0 39 chr15 76794729 76794831 -26700143 + (CATATA)n Simple_repeat Simple_repeat 2 99 0 7 1170 222 260 0 0 chr15 76794896 76794969 -26700005 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 7 1170 3629 18 0 0 chr15 76794972 76795368 -26699606 + MTA_Mm LTR MaLR 1 396 0 7 1170 4505 12 2 0 chr15 76795408 76795900 -26699074 - MT2_Mm LTR ERVL 0 493 1 7 1170 319 0 0 0 chr15 76795900 76795938 -26699036 - MERVL-int LTR ERVL 0 5485 5448 7 1170 403 167 46 35 chr15 76795938 76796025 -26698949 - ORR1A3-int LTR MaLR -1323 640 553 7 1170 41507 16 14 0 chr15 76796025 76801312 -26693662 - MERVL-int LTR ERVL -125 5360 1 7 1170 4505 12 2 0 chr15 76801312 76801804 -26693170 - MT2_Mm LTR ERVL 0 493 1 7 1170 290 315 9 0 chr15 76801804 76801838 -26693136 + (CATATA)n Simple_repeat Simple_repeat 6 39 0 7 1170 2067 149 54 19 chr15 76801838 76802208 -26692766 - ORR1C2 LTR MaLR 0 384 2 7 1170 290 315 9 0 chr15 76802208 76802281 -26692693 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 7 1170 477 299 11 22 chr15 76802313 76802494 -26692480 + (CATATA)n Simple_repeat Simple_repeat 1 179 0 7 1170 246 267 32 65 chr15 76802500 76802624 -26692350 + RMER12 LTR ERVK 736 855 -467 7 1170 360 318 0 8 chr15 76802624 76802757 -26692217 + (TATATG)n Simple_repeat Simple_repeat 4 135 0 7 1170 642 109 11 3 chr15 76802775 76802916 -26692058 - B2_Mm2 SINE B2 -1 215 1 7 1170 210 37 0 0 chr15 76803511 76803538 -26691436 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1170 1211 29 0 0 chr15 76803538 76803675 -26691299 - B1_Mus2 SINE Alu -10 137 1 7 1170 186 43 0 0 chr15 76804368 76804391 -26690583 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 7 1170 223 26 24 49 chr15 76805870 76805911 -26689063 + (CAAAAA)n Simple_repeat Simple_repeat 1 40 0 7 1170 861 207 66 11 chr15 76806088 76806269 -26688705 + RLTR33 LTR ERVK 175 365 -313 7 1170 520 329 107 82 chr15 76806731 76807399 -26687575 + MMERGLN-int LTR ERV1 2669 3337 -4219 7 1170 330 26 0 0 chr15 76807399 76807438 -26687536 + (CAAA)n Simple_repeat Simple_repeat 3 41 0 7 1170 520 329 107 82 chr15 76807438 76807968 -26687006 + MMERGLN-int LTR ERV1 3338 3897 -3659 7 1171 315 367 4 48 chr15 76808649 76808898 -26686076 + MMERGLN-int LTR ERV1 4887 5124 -2477 7 1171 290 170 75 0 chr15 76808993 76809046 -26685928 + RLTR14-int LTR ERV1 3517 3573 -1744 7 1171 342 0 0 0 chr15 76809047 76809085 -26685889 + (TC)n Simple_repeat Simple_repeat 1 38 0 7 1171 432 0 0 0 chr15 76809085 76809132 -26685842 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 1171 2434 80 0 60 chr15 76810723 76811071 -26683903 - ORR1A2 LTR MaLR 0 327 1 7 1171 225 202 266 0 chr15 76811450 76811529 -26683445 - RMER21B LTR ERV1 -277 565 466 7 1171 2353 216 102 86 chr15 76811935 76812142 -26682832 + RLTR19-int LTR ERVK 2346 2557 -3580 7 1171 1336 80 37 21 chr15 76812142 76812333 -26682641 + B2_Mm2 SINE B2 2 195 0 7 1171 2353 216 102 86 chr15 76812333 76812955 -26682019 + RLTR19-int LTR ERVK 2558 3189 -2948 7 1171 1245 92 11 6 chr15 76813121 76813295 -26681679 + B2_Mm2 SINE B2 2 176 -19 7 1171 389 188 67 29 chr15 76813298 76813402 -26681572 - B2_Mm2 SINE B2 -16 179 72 7 1171 918 185 5 33 chr15 76813413 76813597 -26681377 + RMER10B LTR ERVL 220 398 0 7 1171 2342 115 17 11 chr15 76813631 76813983 -26680991 + ORR1B1 LTR MaLR 41 394 0 7 1171 266 291 25 25 chr15 76813999 76814119 -26680855 + RLTR14-int LTR ERV1 4891 5010 -307 7 1171 402 214 19 84 chr15 76815012 76815119 -26679855 - B1_Mur3 SINE Alu -20 100 1 7 1171 958 76 217 25 chr15 76815726 76815887 -26679087 - B2_Mm2 SINE B2 -2 193 2 7 1171 1003 115 0 0 chr15 76815895 76816034 -26678940 - B1_Mus1 SINE Alu 0 148 10 7 1171 728 250 12 19 chr15 76816034 76816211 -26678763 - B3A SINE B2 -18 175 1 7 1171 669 255 130 19 chr15 76816211 76816415 -26678559 - B4A SINE B4 -65 227 1 7 1171 448 224 92 50 chr15 76816544 76816685 -26678289 + RLTR41 LTR ERV1 300 446 0 8 1171 279 0 0 0 chr15 76816835 76816866 -26678108 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 1171 698 185 23 0 chr15 76817331 76817461 -26677513 - B1_Mur4 SINE Alu -16 134 2 8 1171 298 362 31 18 chr15 76818692 76818855 -26676119 + MIR SINE MIR 1 165 -97 8 1171 3247 67 2 12 chr15 76819249 76819660 -26675314 - MTB_Mm LTR MaLR 0 407 1 8 1171 225 286 0 20 chr15 76819708 76819758 -26675216 + MER67C LTR ERV1 179 227 -484 8 1171 366 23 0 0 chr15 76819944 76819987 -26674987 + (TC)n Simple_repeat Simple_repeat 2 44 0 8 1171 1449 52 6 0 chr15 76820014 76820188 -26674786 - B2_Mm1t SINE B2 -18 175 1 8 1171 352 195 19 32 chr15 76821115 76821269 -26673705 + (CA)n Simple_repeat Simple_repeat 1 152 0 8 1171 269 252 0 32 chr15 76821496 76821619 -26673355 + (TG)n Simple_repeat Simple_repeat 1 119 0 8 1171 336 254 0 33 chr15 76821654 76821837 -26673137 + (TG)n Simple_repeat Simple_repeat 2 178 0 8 1171 207 0 0 0 chr15 76822116 76822139 -26672835 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 8 1171 218 337 119 79 chr15 76822143 76822183 -26672791 + B4 SINE B4 40 220 -69 8 1171 509 278 37 8 chr15 76822183 76822317 -26672657 + B1F2 SINE Alu 6 143 -6 8 1171 215 178 22 0 chr15 76823270 76823315 -26671659 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 8 1171 2440 111 67 178 chr15 76823516 76824003 -26670971 + RLTR24 LTR ERV1 1 397 -132 8 1171 279 0 0 0 chr15 76824003 76824034 -26670940 + (C)n Simple_repeat Simple_repeat 1 31 0 8 1171 2440 111 67 178 chr15 76824034 76824141 -26670833 + RLTR24 LTR ERV1 398 529 0 8 1171 981 102 14 21 chr15 76824320 76824460 -26670514 + B1_Mur4 SINE Alu 1 139 -11 8 1171 535 233 0 55 chr15 76824473 76824600 -26670374 + ID_B1 SINE B4 105 224 0 8 1171 538 206 0 28 chr15 76825476 76825621 -26669353 + (TATATG)n Simple_repeat Simple_repeat 1 141 0 8 1171 356 100 0 0 chr15 76825621 76825671 -26669303 - HAL1-3A_ME LINE L1 -840 2018 1969 8 1171 1156 83 19 0 chr15 76825822 76825979 -26668995 + B2_Mm1t SINE B2 1 160 -33 8 1171 416 59 71 3 chr15 76826007 76826105 -26668869 + B2_Mm2 SINE B2 47 187 -8 8 1171 261 353 31 135 chr15 76826248 76826339 -26668635 - B4 SINE B4 -2 290 118 8 1171 523 226 10 0 chr15 76826339 76826441 -26668533 - B1_Mur2 SINE Alu -14 135 33 8 1171 677 259 137 8 chr15 76826408 76826642 -26668332 - B4 SINE B4 -27 265 2 8 1171 286 231 47 150 chr15 76826666 76826793 -26668181 - PB1D7 SINE Alu 0 120 7 8 1171 4027 112 110 2 chr15 76827809 76828417 -26666557 - RLTR33 LTR ERVK -4 674 1 8 1171 918 168 109 25 chr15 76828957 76829159 -26665815 - URR1A DNA MER1_type -7 219 1 8 1171 189 256 115 0 chr15 76829823 76829901 -26665073 + MIR SINE MIR 40 126 -82 8 1171 330 294 10 10 chr15 76830512 76830615 -26664359 - MIR SINE MIR -135 127 25 8 1171 302 312 35 21 chr15 76830860 76831001 -26663973 + (TGGA)n Simple_repeat Simple_repeat 2 144 0 8 1171 2114 131 99 16 chr15 76831182 76831546 -26663428 + ORR1B1 LTR MaLR 1 394 0 8 1171 241 303 0 15 chr15 76833497 76833564 -26661410 - Tigger7 DNA MER2_type -2206 285 220 8 1171 242 267 67 0 chr15 76834069 76834174 -26660800 - MIRc SINE MIR -138 130 19 8 1171 907 303 114 101 chr15 76835099 76835494 -26659480 - MER44B DNA MER2_type -14 536 99 8 1171 853 197 0 7 chr15 76835494 76835642 -26659332 + B1_Mur1 SINE Alu 2 148 -1 8 1171 907 303 114 101 chr15 76835642 76835771 -26659203 - MER44B DNA MER2_type -452 98 5 8 1171 286 193 88 0 chr15 76835773 76835830 -26659144 + B3 SINE B2 1 62 -154 8 1171 408 234 35 18 chr15 76836013 76836126 -26658848 + B3A SINE B2 81 195 -3 8 1171 224 274 97 0 chr15 76836231 76836293 -26658681 + MIR SINE MIR 45 112 -150 8 1171 468 0 0 0 chr15 76836306 76836358 -26658616 + (GA)n Simple_repeat Simple_repeat 1 52 0 8 1171 240 287 85 33 chr15 76837675 76837795 -26657179 + MIR SINE MIR 45 160 -102 8 1171 4254 97 55 53 chr15 76838262 76839012 -26655962 - RMER17A LTR ERVK 0 751 1 8 1171 247 318 120 8 chr15 76840369 76840502 -26654472 - MIR SINE MIR -36 226 79 8 1171 259 286 0 16 chr15 76840756 76840820 -26654154 + (CA)n Simple_repeat Simple_repeat 2 64 0 8 1171 237 250 242 0 chr15 76840986 76841106 -26653868 - MLT2C2 LTR ERVL 0 560 412 8 1171 254 253 32 84 chr15 76841233 76841290 -26653684 - MLT2C2 LTR ERVL -365 99 46 8 1171 2222 113 3 60 chr15 76841290 76841639 -26653335 + ORR1A4 LTR MaLR 1 329 0 8 1171 254 253 32 84 chr15 76841639 76841676 -26653298 - MLT2C2 LTR ERVL -419 45 10 8 1171 764 193 49 14 chr15 76843012 76843154 -26651820 - B1_Mur3 SINE Alu -1 148 2 8 1171 1290 34 0 0 chr15 76843370 76843517 -26651457 + B1_Mus2 SINE Alu 1 147 0 8 1171 227 259 37 0 chr15 76843550 76843604 -26651370 + B1F1 SINE Alu 1 56 -93 8 1171 206 182 0 43 chr15 76844718 76844764 -26650210 + (CAT)n Simple_repeat Simple_repeat 1 44 0 8 1171 276 313 65 58 chr15 76844800 76844939 -26650035 - RSINE1 SINE B4 -6 159 20 8 1171 489 351 78 0 chr15 76846599 76846804 -26648170 - MIR SINE MIR -14 248 28 8 1171 230 342 66 8 chr15 76847082 76847203 -26647771 - MIRm SINE MIR -95 181 54 8 1171 306 73 0 0 chr15 76847470 76847511 -26647463 + (CCCTG)n Simple_repeat Simple_repeat 1 41 0 8 1171 181 189 0 0 chr15 76847695 76847732 -26647242 + MIR SINE MIR 100 136 -126 8 1171 230 266 19 34 chr15 76849692 76849781 -26645193 - MIR SINE MIR -27 181 95 8 1171 370 294 67 11 chr15 76850759 76850906 -26644068 + MIR SINE MIR 6 176 -100 8 1171 958 231 45 0 chr15 76851131 76851330 -26643644 + B3 SINE B2 2 209 -7 8 1171 230 259 17 0 chr15 76852006 76852064 -26642910 - MIR SINE MIR -80 128 70 8 1171 569 285 37 37 chr15 76853480 76853503 -26641471 - RSINE1 SINE B4 0 165 146 8 1171 492 18 0 0 chr15 76853503 76853560 -26641414 + (GA)n Simple_repeat Simple_repeat 1 57 0 8 1171 569 285 37 37 chr15 76853560 76853700 -26641274 - RSINE1 SINE B4 -20 145 2 8 1171 234 127 14 27 chr15 76854002 76854075 -26640899 + T-rich Low_complexity Low_complexity 1 72 0 8 1171 1254 20 0 40 chr15 76854075 76854227 -26640747 - B1_Mus2 SINE Alu 0 147 2 8 1171 616 230 0 49 chr15 76854364 76854496 -26640478 + RSINE1 SINE B4 2 127 -38 8 1171 315 0 0 0 chr15 76854496 76854531 -26640443 + (TG)n Simple_repeat Simple_repeat 1 35 0 8 1171 27 0 0 0 chr15 76854546 76854573 -26640401 + AT_rich Low_complexity Low_complexity 1 27 0 8 1171 198 200 35 35 chr15 76854783 76854897 -26640077 + (TCCA)n Simple_repeat Simple_repeat 4 117 0 8 1171 239 216 80 18 chr15 76854915 76855028 -26639946 + (TCCA)n Simple_repeat Simple_repeat 3 122 0 8 1171 583 257 13 19 chr15 76855185 76855344 -26639630 - B1_Mur1 SINE Alu 0 147 3 8 1171 296 307 76 65 chr15 76855344 76855405 -26639569 - MT2B LTR ERVL -426 158 107 8 1171 1320 138 113 0 chr15 76855523 76855726 -26639248 + URR1A DNA MER1_type 1 226 0 8 1171 252 0 0 0 chr15 76856293 76856321 -26638653 + (CA)n Simple_repeat Simple_repeat 2 29 0 8 1171 1407 86 27 0 chr15 76857078 76857264 -26637710 + B2_Mm2 SINE B2 1 191 -4 8 1171 182 276 90 26 chr15 76857311 76857389 -26637585 + L3 LINE CR1 1057 1139 -3350 8 1171 222 159 0 60 chr15 76858732 76858799 -26636175 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 8 1171 218 32 32 0 chr15 76858846 76858877 -26636097 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 8 1171 275 0 0 28 chr15 76858966 76859002 -26635972 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8 1171 257 203 0 33 chr15 76859006 76859067 -26635907 - ID_B1 SINE B4 0 224 166 8 1171 375 228 174 9 chr15 76859133 76859248 -26635726 - ID_B1 SINE B4 -3 221 88 8 1171 382 235 98 49 chr15 76859652 76859795 -26635179 - MIR SINE MIR -92 170 21 8 1171 296 311 99 11 chr15 76860491 76860673 -26634301 + RLTR21 LTR ERVK 1053 1250 -322 8 1171 348 238 14 7 chr15 76860677 76860825 -26634149 + (TG)n Simple_repeat Simple_repeat 2 150 0 8 1171 516 224 0 0 chr15 76860854 76861019 -26633955 + (TG)n Simple_repeat Simple_repeat 2 166 0 8 1171 209 208 13 0 chr15 76861030 76861107 -26633867 + (TG)n Simple_repeat Simple_repeat 1 78 0 8 1171 664 323 7 70 chr15 76861109 76861382 -26633592 - B4A SINE B4 -2 290 35 8 1171 324 0 0 0 chr15 76861554 76861590 -26633384 + (TA)n Simple_repeat Simple_repeat 2 37 0 8 1171 291 178 301 32 chr15 76861653 76861746 -26633228 - RSINE1 SINE B4 -45 120 3 8 1171 1234 41 7 0 chr15 76862382 76862529 -26632445 + B1_Mus1 SINE Alu 1 148 0 8 1171 222 37 0 0 chr15 76862529 76862556 -26632418 + (A)n Simple_repeat Simple_repeat 1 27 0 8 1171 459 201 23 11 chr15 76862624 76862800 -26632174 + (TG)n Simple_repeat Simple_repeat 1 178 0 8 1171 448 214 30 0 chr15 76862837 76863005 -26631969 + (TG)n Simple_repeat Simple_repeat 2 174 0 8 1171 244 264 9 0 chr15 76863040 76863117 -26631857 - B1F1 SINE Alu -26 94 16 8 1171 919 294 95 82 chr15 76863152 76863566 -26631408 - Lx9 LINE L1 -267 7377 6954 8 1171 606 150 127 8 chr15 76863566 76863700 -26631274 + B1_Mur4 SINE Alu 1 150 0 8 1171 919 289 99 85 chr15 76863700 76863732 -26631242 - Lx9 LINE L1 -691 6953 6939 8 1171 924 126 0 0 chr15 76863732 76863883 -26631091 + (GAA)n Simple_repeat Simple_repeat 3 153 0 8 1171 919 289 99 85 chr15 76863883 76863957 -26631017 - Lx9 LINE L1 -706 6938 6865 8 1171 1431 253 70 42 chr15 76863996 76864470 -26630504 + L1_Rod LINE L1 5179 5665 -182 8 1171 383 280 60 40 chr15 76864705 76864854 -26630120 - L1ME2z LINE L1 -270 6174 6023 8 1171 282 204 204 0 chr15 76865714 76865807 -26629167 - ORR1A2 LTR MaLR 0 374 263 8 1171 1927 143 67 6 chr15 76865814 76866145 -26628829 + RMER13A LTR ERVK 1 351 -509 8 1171 1066 103 6 18 chr15 76866145 76866313 -26628661 - ORR1A2 LTR MaLR -161 166 1 8 1171 504 140 67 39 chr15 76866313 76866414 -26628560 - MTD LTR MaLR -315 104 1 8 1171 332 134 24 35 chr15 76867619 76867704 -26627270 + CT-rich Low_complexity Low_complexity 3 86 0 8 1171 202 118 0 29 chr15 76868122 76868157 -26626817 + (TGGGGG)n Simple_repeat Simple_repeat 6 39 0 8 1171 629 259 36 36 chr15 76868979 76869175 -26625799 - B3A SINE B2 -1 197 2 8 1171 946 132 0 14 chr15 76869212 76869350 -26625624 + B1_Mur3 SINE Alu 1 136 -13 8 1171 492 208 0 0 chr15 76869350 76869456 -26625518 + GA-rich Low_complexity Low_complexity 3 108 0 8 1171 310 293 10 29 chr15 76869466 76869568 -26625406 + CT-rich Low_complexity Low_complexity 4 103 0 9 1171 238 309 47 102 chr15 76869853 76870196 -26624778 + RMER17C LTR ERVK 46 369 -41 9 1171 360 328 0 16 chr15 76870391 76870512 -26624462 + RSINE1 SINE B4 37 155 -10 9 1171 485 297 81 64 chr15 76871090 76871324 -26623650 - MER2 DNA MER2_type -21 324 87 9 1171 270 296 12 0 chr15 76871356 76871437 -26623537 - PB1D10 SINE Alu -9 108 27 9 1171 402 283 31 62 chr15 76871602 76871626 -26623348 + Lx8 LINE L1 6840 6863 -610 9 1171 3457 30 8 0 chr15 76871626 76872019 -26622955 + MTA_Mm LTR MaLR 1 396 0 9 1171 8070 72 15 21 chr15 76872019 76872408 -26622566 + MTA_Mm-int LTR MaLR 1 389 -709 9 1171 1345 80 11 0 chr15 76872408 76872583 -26622391 + B2_Mm1t SINE B2 2 178 -15 9 1171 1448 84 16 0 chr15 76872586 76872777 -26622197 + B2_Mm2 SINE B2 1 194 -1 9 1171 8070 72 15 21 chr15 76872777 76873487 -26621487 + MTA_Mm-int LTR MaLR 390 1098 0 9 1171 3131 40 53 0 chr15 76873487 76873863 -26621111 + MTA_Mm LTR MaLR 1 396 0 9 1171 402 283 31 62 chr15 76873863 76873964 -26621010 + Lx8 LINE L1 6864 6963 -510 9 1171 654 226 210 17 chr15 76874052 76874290 -26620684 - B4A SINE B4 -4 288 5 9 1171 1574 222 92 88 chr15 76874405 76874914 -26620060 + RLTR18B LTR ERVK 1 511 -1 9 1171 294 29 0 0 chr15 76874919 76874954 -26620020 + (CA)n Simple_repeat Simple_repeat 2 36 0 9 1171 269 227 76 0 chr15 76875241 76875307 -26619667 - ID4 SINE ID 0 83 13 9 1171 222 37 0 0 chr15 76877213 76877240 -26617734 + (G)n Simple_repeat Simple_repeat 1 27 0 9 1171 2269 135 40 11 chr15 76877641 76878014 -26616960 - ORR1C2 LTR MaLR 0 384 1 9 1171 808 56 0 0 chr15 76878072 76878179 -26616795 + B1_Mus2 SINE Alu 32 138 -9 9 1171 693 0 0 0 chr15 76878179 76878256 -26616718 + (CAAAC)n Simple_repeat Simple_repeat 2 78 0 9 1171 189 94 0 0 chr15 76878257 76878289 -26616685 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 9 1171 1882 181 46 59 chr15 76878450 76878909 -26616065 - RMER20A LTR ERVK -53 463 11 9 1171 773 206 7 33 chr15 76879389 76879529 -26615445 + B1_Mus1 SINE Alu 2 139 -9 9 1171 181 0 0 65 chr15 76879529 76879560 -26615414 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 9 1171 228 282 0 163 chr15 76879596 76879719 -26615255 + MER2B DNA MER2_type 228 330 -6 9 1171 251 310 71 82 chr15 76879785 76879968 -26615006 + RMER13A LTR ERVK 678 858 -2 9 1171 782 208 5 0 chr15 76880293 76880704 -26614270 + CT-rich Low_complexity Low_complexity 1 413 0 9 1171 601 160 0 0 chr15 76881850 76881956 -26613018 - BC1_Mm scRNA scRNA -46 106 1 9 1171 1219 68 0 0 chr15 76882364 76882512 -26612462 - B1_Mus1 SINE Alu 0 148 1 9 1171 230 368 35 45 chr15 76882632 76882834 -26612140 + RMER2 LTR ERV1 368 567 0 9 1171 1302 163 36 58 chr15 76882834 76883108 -26611866 - MTD LTR MaLR -147 272 5 9 1171 556 179 0 13 chr15 76883603 76883756 -26611218 + (TGG)n Simple_repeat Simple_repeat 3 153 0 9 1171 227 208 57 0 chr15 76883803 76883856 -26611118 - B1F SINE Alu -21 128 73 9 1171 373 93 324 36 chr15 76883902 76884013 -26610961 - B2_Mm2 SINE B2 -6 189 47 9 1171 1079 137 0 0 chr15 76884064 76884232 -26610742 - B2_Mm2 SINE B2 -27 168 1 9 1171 519 45 0 0 chr15 76885019 76885085 -26609889 + (GA)n Simple_repeat Simple_repeat 2 67 0 9 1171 315 328 74 0 chr15 76885501 76885623 -26609351 - MLT1A0 LTR MaLR 0 365 235 9 1171 254 174 0 21 chr15 76885741 76885788 -26609186 - MLT1A0 LTR MaLR -273 92 47 9 1171 692 222 66 7 chr15 76885810 76885946 -26609028 + B1_Mur1 SINE Alu 1 144 -5 9 1171 230 222 0 0 chr15 76886016 76886061 -26608913 + CT-rich Low_complexity Low_complexity 2 46 0 9 1171 532 219 38 52 chr15 76886061 76886212 -26608762 - B1F1 SINE Alu 0 150 1 9 1171 1779 130 66 43 chr15 76887675 76888068 -26606906 - RMER17C LTR ERVK -8 402 1 9 1171 924 171 7 0 chr15 76888739 76888885 -26606089 + B1_Mur4 SINE Alu 1 147 -3 9 1171 1281 199 21 200 chr15 76888906 76889377 -26605597 - RLTR23 LTR ERV1 -36 394 8 9 1171 263 267 294 0 chr15 76889472 76889506 -26605468 + MTE2a LTR MaLR 172 206 -164 9 1171 4271 53 2 8 chr15 76889506 76890021 -26604953 - LTRIS3 LTR ERV1 0 512 1 9 1171 274 267 294 0 chr15 76890021 76890132 -26604842 + MTE2a LTR MaLR 207 359 -11 9 1171 291 309 45 55 chr15 76890138 76890218 -26604756 - L1M3 LINE L1 -1520 4620 4546 9 1171 790 170 107 177 chr15 76890218 76890354 -26604620 - URR1A DNA MER1_type 0 226 98 9 1171 1068 88 0 39 chr15 76890354 76890507 -26604467 + B1_Mus2 SINE Alu 1 147 0 9 1171 790 170 107 177 chr15 76890507 76890613 -26604361 - URR1A DNA MER1_type -129 97 1 9 1171 291 309 45 55 chr15 76890613 76890731 -26604243 - L1M3 LINE L1 -1595 4545 4424 9 1171 2986 127 32 8 chr15 76891518 76892017 -26602957 - RLTR11A LTR ERVK -2 526 16 9 1171 952 97 108 97 chr15 76892097 76892153 -26602821 - ORR1B1 LTR MaLR 0 394 349 9 1171 186 71 0 0 chr15 76892153 76892181 -26602793 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 9 1171 1183 15 0 0 chr15 76892181 76892314 -26602660 - B1_Mm SINE Alu -13 134 2 9 1171 952 116 103 99 chr15 76892314 76892543 -26602431 - ORR1B1 LTR MaLR -46 348 84 9 1171 363 303 87 27 chr15 76892724 76892873 -26602101 + RSINE1 SINE B4 2 159 -6 9 1171 383 364 0 0 chr15 76893261 76893401 -26601573 + (TATG)n Simple_repeat Simple_repeat 4 143 0 9 1171 614 254 145 90 chr15 76893402 76893657 -26601317 - B4A SINE B4 0 292 24 9 1171 1100 63 7 0 chr15 76893700 76893842 -26601132 - B1_Mus1 SINE Alu 0 148 6 9 1171 749 79 23 16 chr15 76893865 76893993 -26600981 + (TCTA)n Simple_repeat Simple_repeat 4 132 0 9 1171 435 294 161 68 chr15 76894036 76894284 -26600690 - B4A SINE B4 -14 278 8 9 1171 449 281 47 68 chr15 76894328 76894351 -26600623 - B3 SINE B2 -11 205 184 9 1171 1437 76 5 0 chr15 76894351 76894536 -26600438 - B2_Mm1t SINE B2 -6 187 2 9 1171 476 281 47 68 chr15 76894536 76894703 -26600271 - B3A SINE B2 -33 183 19 9 1171 557 233 112 36 chr15 76894683 76894959 -26600015 - ORR1D2 LTR MaLR -5 365 1 9 1171 1552 197 83 8 chr15 76895016 76895334 -26599640 + ORR1D2 LTR MaLR 1 337 -33 9 1171 180 0 0 0 chr15 76895334 76895354 -26599620 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 9 1171 1033 272 65 90 chr15 76895354 76895366 -26599608 + ORR1D2 LTR MaLR 329 335 -24 9 1171 1279 34 0 7 chr15 76895366 76895515 -26599459 - B1_Mus1 SINE Alu 0 148 1 9 1171 1075 95 14 0 chr15 76895518 76895665 -26599309 - B1_Mur4 SINE Alu -1 149 1 9 1171 1033 272 65 90 chr15 76895665 76895697 -26599277 + ORR1D2 LTR MaLR 336 359 0 9 1171 333 279 82 65 chr15 76895798 76896043 -26598931 - MLT1E1 LTR MaLR -7 647 399 9 1171 1526 169 28 65 chr15 76896101 76896333 -26598641 + RMER17C LTR ERVK 16 406 -552 9 1171 710 69 0 10 chr15 76896333 76896435 -26598539 + (TTCTC)n Simple_repeat Simple_repeat 5 105 0 9 1171 1526 172 100 38 chr15 76896435 76896623 -26598351 + RMER17C LTR ERVK 187 406 -4 9 1171 660 107 0 0 chr15 76897141 76897244 -26597730 + (CA)n Simple_repeat Simple_repeat 1 103 0 9 1171 515 294 77 45 chr15 76897753 76897974 -26597000 + RMER2 LTR ERV1 335 562 -5 9 1171 573 76 0 0 chr15 76898098 76898177 -26596797 + (GGAA)n Simple_repeat Simple_repeat 3 81 0 9 1171 1010 0 0 0 chr15 76898220 76898327 -26596647 + U6 snRNA snRNA 1 107 0 9 1171 192 77 0 0 chr15 76898525 76898551 -26596423 + (A)n Simple_repeat Simple_repeat 1 26 0 9 1171 297 0 0 0 chr15 76898577 76898610 -26596364 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 9 1171 513 0 0 0 chr15 76899488 76899545 -26595429 + (GGA)n Simple_repeat Simple_repeat 3 59 0 9 1171 267 121 0 0 chr15 76899770 76899809 -26595165 - B1_Mus1 SINE Alu -107 41 2 9 1171 378 42 0 0 chr15 76900027 76900075 -26594899 + (TATG)n Simple_repeat Simple_repeat 2 49 0 9 1171 251 128 51 0 chr15 76900092 76900131 -26594843 + B4A SINE B4 190 230 -62 9 1171 1354 216 54 6 chr15 76900184 76900501 -26594473 + RMER1C Other Other 1010 1341 -1 9 1171 243 125 0 0 chr15 76900595 76900635 -26594339 + (CA)n Simple_repeat Simple_repeat 1 40 0 9 1171 1673 158 73 32 chr15 76900682 76901022 -26593952 - ORR1D2 LTR MaLR -8 362 9 9 1171 193 278 200 0 chr15 76902586 76902676 -26592298 - MER5B DNA MER1_type -70 108 1 9 1171 434 216 21 101 chr15 76902769 76902898 -26592076 - B4 SINE B4 0 292 92 9 1171 225 267 0 0 chr15 76902949 76902994 -26591980 - B4A SINE B4 -246 46 2 9 1171 368 311 28 0 chr15 76903581 76903687 -26591287 + MTEb LTR MaLR 3 111 -248 9 1171 635 151 151 0 chr15 76903714 76903833 -26591141 - B1_Mus1 SINE Alu -5 143 7 9 1171 1160 111 0 6 chr15 76903837 76904018 -26590956 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 9 1171 750 95 147 0 chr15 76904018 76904134 -26590840 - B1_Mus2 SINE Alu -12 135 3 9 1171 407 310 18 88 chr15 76904140 76904310 -26590664 + MTEb LTR MaLR 205 362 -17 9 1171 333 243 64 10 chr15 76904336 76904429 -26590545 + B1F SINE Alu 11 115 -2 9 1171 243 0 0 0 chr15 76904433 76904460 -26590514 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1171 303 272 88 97 chr15 76904629 76904963 -26590011 + RLTR12B LTR ERVK 12 328 -200 9 1171 261 253 123 25 chr15 76905141 76905222 -26589752 + Lx8 LINE L1 7266 7354 -119 9 1171 369 0 0 0 chr15 76905224 76905265 -26589709 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 1171 1333 194 45 5 chr15 76905425 76905697 -26589277 + ORR1D1 LTR MaLR 1 289 -70 9 1171 259 151 67 34 chr15 76905701 76905790 -26589184 + A-rich Low_complexity Low_complexity 2 93 0 9 1171 349 186 14 0 chr15 76905943 76906013 -26588961 + Ricksha_0 DNA MuDR 200 270 -1463 9 1171 485 171 60 51 chr15 76906120 76906237 -26588737 + B1_Mur1 SINE Alu 29 146 -3 9 1171 485 0 0 0 chr15 76906574 76906631 -26588343 + B2_Mm2 SINE B2 1 57 -138 9 1171 1317 102 21 16 chr15 76906708 76906898 -26588076 + B2_Mm2 SINE B2 1 191 -4 9 1171 839 209 11 33 chr15 76906934 76907112 -26587862 - B3A SINE B2 -11 184 6 9 1171 529 217 35 0 chr15 76907772 76907887 -26587087 - PB1D9 SINE Alu 0 120 2 9 1171 272 328 78 0 chr15 76908375 76908491 -26586483 - LTR40b LTR ERVL -33 429 305 9 1171 207 0 0 0 chr15 76909683 76909706 -26585268 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 9 1171 348 24 0 0 chr15 76912840 76912881 -26582093 + (CAA)n Simple_repeat Simple_repeat 1 41 0 9 1171 300 298 196 19 chr15 76914240 76914449 -26580525 + L1MD LINE L1 2788 3033 -3113 1 1171 613 326 50 8 chr15 76915017 76915255 -26579719 - MER2 DNA MER2_type 0 345 98 1 1171 932 133 7 0 chr15 76917636 76917771 -26577203 - B1_Mur4 SINE Alu -13 137 2 1 1171 591 158 141 8 chr15 76918072 76918193 -26576781 - B1_Mur2 SINE Alu -12 137 1 1 1171 183 42 0 0 chr15 76924706 76924730 -26570244 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 1171 21 0 0 0 chr15 76924755 76924776 -26570198 + AT_rich Low_complexity Low_complexity 1 21 0 1 1171 198 0 0 0 chr15 76924783 76924805 -26570169 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 1 1171 181 30 0 83 chr15 76924934 76924970 -26570004 + (CAAAAA)n Simple_repeat Simple_repeat 6 38 0 1 1171 180 0 0 0 chr15 76926802 76926822 -26568152 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1171 841 179 7 0 chr15 76929009 76929149 -26565825 - B1_Mur4 SINE Alu -7 143 3 1 1171 253 217 357 18 chr15 76930045 76930157 -26564817 + MTD LTR MaLR 270 419 0 1 1171 838 154 7 29 chr15 76930392 76930532 -26564442 + B1_Mur4 SINE Alu 7 143 -7 1 1171 501 17 0 0 chr15 76930815 76930873 -26564101 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 1 1171 280 180 244 11 chr15 76930874 76930964 -26564010 - PB1D10 SINE Alu -5 112 2 1 1171 1312 101 6 0 chr15 76931099 76931277 -26563697 + B2_Mm1t SINE B2 1 179 -14 1 1171 342 128 10 59 chr15 76931323 76931391 -26563583 + B2_Mm2 SINE B2 47 114 -102 1 1171 220 189 0 0 chr15 76931629 76931666 -26563308 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1171 390 336 52 39 chr15 76931669 76931811 -26563163 - RSINE1 SINE B4 0 165 21 1 1171 363 242 29 48 chr15 76931811 76931915 -26563059 - PB1D10 SINE Alu -15 102 1 1 1171 390 336 52 39 chr15 76931915 76931927 -26563047 - RSINE1 SINE B4 -145 20 9 1 1171 504 246 76 76 chr15 76931966 76932098 -26562876 + RSINE1 SINE B4 3 134 -31 1 1171 352 260 188 0 chr15 76932150 76932246 -26562728 - B3 SINE B2 -99 117 4 1 1171 467 284 48 41 chr15 76932285 76932571 -26562403 - B4A SINE B4 -1 291 2 1 1171 1262 103 21 21 chr15 76932929 76933118 -26561856 + B2_Mm2 SINE B2 2 190 -5 1 1171 207 0 0 0 chr15 76933828 76933851 -26561123 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1171 556 195 35 9 chr15 76934163 76934277 -26560697 - B1F SINE Alu -32 117 1 1 1171 493 282 8 8 chr15 76934277 76934295 -26560679 - ID_B1 SINE B4 -29 195 64 1 1171 189 0 0 0 chr15 76936440 76936461 -26558513 + (TTA)n Simple_repeat Simple_repeat 3 23 0 1 1171 430 233 12 0 chr15 76936586 76936672 -26558302 - B4 SINE B4 -205 87 1 1 1171 800 172 28 0 chr15 76937453 76937598 -26557376 + B1_Mur3 SINE Alu 1 149 0 1 1171 237 72 53 18 chr15 76937601 76937658 -26557316 + (CAAAC)n Simple_repeat Simple_repeat 2 60 0 1 1171 463 291 26 45 chr15 76938135 76938290 -26556684 - B3A SINE B2 -45 153 2 1 1171 533 254 7 43 chr15 76939096 76939236 -26555738 + MLT1D LTR MaLR 5 139 -366 1 1172 638 156 62 62 chr15 76939698 76939842 -26555132 - B1_Mur2 SINE Alu -1 148 5 1 1172 227 330 187 31 chr15 76939970 76940195 -26554779 - Charlie5 DNA MER1_type -1 2623 2364 1 1172 34 42 0 0 chr15 76940515 76940563 -26554411 + AT_rich Low_complexity Low_complexity 1 48 0 1 1172 261 196 18 0 chr15 76941918 76941974 -26553000 + BC1_Mm scRNA scRNA 5 61 -91 1 1172 827 163 13 20 chr15 76942230 76942380 -26552594 + B1_Mur2 SINE Alu 1 149 0 1 1172 218 213 0 0 chr15 76942382 76942429 -26552545 + A-rich Low_complexity Low_complexity 1 47 0 1 1172 462 209 83 50 chr15 76945191 76945312 -26549662 - B1_Mur3 SINE Alu -16 133 9 1 1172 259 250 29 0 chr15 76945257 76945325 -26549649 - B4 SINE B4 -143 149 80 1 1172 373 248 189 13 chr15 76945366 76945525 -26549449 - B3A SINE B2 -11 187 1 1 1172 21 0 0 0 chr15 76946495 76946516 -26548458 + AT_rich Low_complexity Low_complexity 1 21 0 1 1172 303 241 0 0 chr15 76946854 76946941 -26548033 + (CACAC)n Simple_repeat Simple_repeat 5 91 0 1 1172 506 202 18 9 chr15 76949429 76949539 -26545435 + PB1D9 SINE Alu 9 119 -1 1 1172 764 160 12 67 chr15 76949616 76949810 -26545164 + B3A SINE B2 1 184 -32 1 1172 1160 42 0 34 chr15 76950055 76950203 -26544771 - B1_Mm SINE Alu 0 147 5 1 1172 227 237 17 0 chr15 76950888 76950947 -26544027 - MIR SINE MIR -100 162 103 1 1172 1632 144 47 21 chr15 76950947 76951287 -26543687 + RMER6A LTR ERVK 408 756 0 1 1172 333 191 15 0 chr15 76951701 76951769 -26543205 - PB1 SINE Alu -34 93 25 1 1172 400 274 21 0 chr15 76952297 76952392 -26542582 - PB1D10 SINE Alu -11 106 10 1 1172 267 344 21 0 chr15 76952309 76952405 -26542569 - ID_B1 SINE B4 -49 175 78 1 1172 470 180 11 0 chr15 76952496 76952585 -26542389 - MTC LTR MaLR 0 419 330 1 1172 808 184 74 40 chr15 76952593 76952768 -26542206 - URR1A DNA MER1_type -1 225 45 1 1172 545 150 10 0 chr15 76952807 76952907 -26542067 - MTC LTR MaLR -148 273 173 1 1172 389 91 0 0 chr15 76952905 76952960 -26542014 - MTC LTR MaLR -366 55 1 1 1172 269 295 28 19 chr15 76954171 76954278 -26540696 - PB1D10 SINE Alu -6 111 4 1 1172 228 324 0 0 chr15 76954512 76954583 -26540391 - Charlie1a DNA MER1_type -426 1029 959 1 1172 307 347 41 23 chr15 76954658 76954829 -26540145 - Charlie1a DNA MER1_type -484 971 798 1 1172 305 188 81 0 chr15 76954843 76954929 -26540045 - B1_Mus2 SINE Alu -6 141 12 1 1172 1416 102 27 40 chr15 76955144 76955368 -26539606 - URR1B DNA MER1_type 0 225 5 1 1172 541 225 16 8 chr15 76955441 76955562 -26539412 - B1_Mur1 SINE Alu 0 149 28 1 1172 530 307 171 25 chr15 76955621 76956210 -26538764 - Charlie1a DNA MER1_type -750 705 15 1 1172 240 86 0 0 chr15 76956257 76956292 -26538682 + (TCCA)n Simple_repeat Simple_repeat 3 37 0 1 1172 643 285 55 0 chr15 76956323 76956488 -26538486 - B3 SINE B2 -42 174 1 1 1172 424 238 48 0 chr15 76956987 76957092 -26537882 + PB1D10 SINE Alu 1 110 -7 1 1172 314 208 26 53 chr15 76957097 76957173 -26537801 + ID2 SINE ID 3 76 -7 1 1172 221 244 38 15 chr15 76957230 76957305 -26537669 - MIR SINE MIR -101 167 91 1 1172 361 172 452 0 chr15 76959078 76959171 -26535803 - B1_Mus1 SINE Alu -13 135 1 1 1172 1131 83 7 0 chr15 76959206 76959350 -26535624 + B1_Mm SINE Alu 1 145 -2 1 1172 222 37 0 0 chr15 76959350 76959377 -26535597 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1172 266 262 107 0 chr15 76959438 76959522 -26535452 + L1M5 LINE L1 2993 3085 -3061 1 1172 814 186 64 0 chr15 76959523 76959695 -26535279 + B3 SINE B2 1 183 -33 1 1172 396 255 351 0 chr15 76959789 76959997 -26534977 + B4 SINE B4 8 288 -4 1 1172 668 230 22 48 chr15 76960204 76960432 -26534542 - RLTR15 LTR ERVK -136 223 2 1 1172 813 188 0 34 chr15 76960432 76960581 -26534393 + B1_Mur3 SINE Alu 1 144 -5 1 1172 207 0 0 0 chr15 76960610 76960633 -26534341 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 1172 252 282 55 55 chr15 76960661 76960770 -26534204 + PB1D10 SINE Alu 1 109 -8 1 1172 578 281 58 15 chr15 76960830 76961036 -26533938 - ID_B1 SINE B4 -5 219 5 1 1172 212 219 15 15 chr15 76961113 76961178 -26533796 + A-rich Low_complexity Low_complexity 2 66 0 1 1172 586 137 42 0 chr15 76962008 76962103 -26532871 + RMER1C Other Other 1006 1104 -238 1 1172 463 216 31 0 chr15 76962090 76962187 -26532787 + RMER1C Other Other 1243 1342 0 1 1172 422 271 22 15 chr15 76962275 76962410 -26532564 - B1F1 SINE Alu -9 140 5 1 1172 347 269 144 34 chr15 76963530 76963676 -26531298 - RSINE1 SINE B4 0 165 4 1 1172 993 94 65 0 chr15 76964295 76964433 -26530541 + B1_Mus1 SINE Alu 2 148 0 1 1172 605 293 6 19 chr15 76964715 76964875 -26530099 - B3A SINE B2 -2 196 39 1 1172 256 167 0 20 chr15 76964902 76964951 -26530023 - MTD LTR MaLR -40 379 332 1 1172 325 331 8 0 chr15 76965042 76965172 -26529802 + (CACG)n Simple_repeat Simple_repeat 4 134 0 1 1172 850 244 120 49 chr15 76965227 76965494 -26529480 - MTD LTR MaLR -131 288 3 1 1172 729 223 17 35 chr15 76965955 76966028 -26528946 + B4A SINE B4 122 196 -96 1 1172 3146 65 8 0 chr15 76966028 76966425 -26528549 + MTB LTR MaLR 1 400 0 1 1172 729 223 17 35 chr15 76966425 76966523 -26528451 + B4A SINE B4 197 290 -2 1 1172 338 347 62 14 chr15 76966811 76966957 -26528017 + B4 SINE B4 136 288 -4 1 1172 760 226 59 39 chr15 76967078 76967111 -26527863 + B3 SINE B2 3 35 -181 1 1172 3018 46 0 3 chr15 76967111 76967480 -26527494 + L1Md_F3 LINE L1 6203 6570 -14 1 1172 760 226 59 39 chr15 76967480 76967649 -26527325 + B3 SINE B2 36 209 -7 1 1172 1200 119 11 0 chr15 76967690 76967867 -26527107 + B2_Mm1t SINE B2 1 179 -14 1 1172 216 218 0 35 chr15 76967914 76967971 -26527003 + B2_Mm2 SINE B2 47 101 -94 1 1172 251 119 48 0 chr15 76970221 76970263 -26524711 + ID_B1 SINE B4 174 217 -7 1 1172 433 275 74 74 chr15 76970267 76970416 -26524558 + B3A SINE B2 2 150 -48 1 1172 428 281 127 52 chr15 76971031 76971124 -26523850 + B3A SINE B2 1 93 -105 1 1172 1339 69 17 11 chr15 76971124 76971300 -26523674 - B2_Mm2 SINE B2 -18 177 1 1 1172 428 281 127 52 chr15 76971300 76971379 -26523595 + B3A SINE B2 94 186 -12 1 1172 917 224 30 25 chr15 76971784 76971985 -26522989 + B3 SINE B2 1 202 -14 1 1172 641 223 71 14 chr15 76971993 76972134 -26522840 + B1_Mur2 SINE Alu 1 149 0 1 1172 284 315 102 88 chr15 76972785 76973070 -26521904 + B4A SINE B4 2 290 -2 1 1172 273 253 0 51 chr15 76973800 76973879 -26521095 + ID4_ SINE ID 3 77 -6 1 1172 570 219 144 41 chr15 76973926 76974121 -26520853 + B3 SINE B2 2 216 0 1 1172 498 274 48 0 chr15 76974739 76974863 -26520111 - ID_B1 SINE B4 -93 131 2 1 1172 188 346 158 23 chr15 76974896 76975029 -26519945 + MIRb SINE MIR 3 153 -115 1 1172 616 259 42 37 chr15 76975848 76976089 -26518885 + L1MEc LINE L1 615 856 -5544 1 1172 1659 180 144 0 chr15 76977021 76977388 -26517586 - Lx9 LINE L1 -12 7632 7213 1 1172 1306 192 179 3 chr15 76977566 76977884 -26517090 + ORR1D1 LTR MaLR 1 374 0 1 1172 455 267 135 5 chr15 76977894 76978116 -26516858 + MER58B DNA MER1_type 80 330 -11 1 1172 613 284 13 0 chr15 76978190 76978345 -26516629 + RSINE1 SINE B4 5 161 -4 1 1172 414 252 0 0 chr15 76978592 76978707 -26516267 + GA-rich Low_complexity Low_complexity 2 116 0 1 1172 214 305 12 12 chr15 76984118 76984201 -26510773 + CT-rich Low_complexity Low_complexity 1 83 0 1 1172 219 103 0 0 chr15 76984379 76984418 -26510556 + (TGAG)n Simple_repeat Simple_repeat 4 42 0 1 1172 234 0 0 0 chr15 76985386 76985412 -26509562 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1172 426 270 157 22 chr15 76985712 76985890 -26509084 + B3 SINE B2 2 203 -13 1 1172 203 213 21 0 chr15 76986798 76986845 -26508129 + L2a LINE L2 3378 3425 -1 1 1172 1630 280 94 44 chr15 76987988 76988978 -26505996 - L1M2 LINE L1 -867 5430 4365 1 1172 248 234 101 25 chr15 76990404 76990483 -26504491 + MIRm SINE MIR 179 263 -13 1 1172 198 0 0 0 chr15 76990519 76990541 -26504433 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1172 21 36 0 0 chr15 76991024 76991052 -26503922 + AT_rich Low_complexity Low_complexity 1 28 0 1 1172 330 26 0 0 chr15 76993653 76993692 -26501282 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1172 189 0 0 0 chr15 76993768 76993789 -26501185 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1172 225 0 0 0 chr15 76994689 76994714 -26500260 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1 1172 247 281 20 30 chr15 76994748 76994847 -26500127 + PB1D10 SINE Alu 1 98 -19 1 1172 256 219 16 0 chr15 76995224 76995288 -26499686 + ID4 SINE ID 2 66 -17 1 1172 899 170 7 0 chr15 76995642 76995789 -26499185 + B1_Mus1 SINE Alu 1 148 0 1 1172 316 254 32 41 chr15 76996501 76996624 -26498350 + MTEb LTR MaLR 248 369 -10 1 1172 406 252 0 45 chr15 76997557 76997572 -26497402 + ID_B1 SINE B4 98 224 0 1 1172 662 169 0 0 chr15 76997572 76997690 -26497284 + B1_Mur2 SINE Alu 32 149 0 1 1172 781 226 82 133 chr15 76998272 76998308 -26496666 - MTE2a LTR MaLR -67 312 272 1 1172 438 36 0 0 chr15 76998308 76998364 -26496610 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1172 781 226 82 133 chr15 76998364 76998643 -26496331 - MTE2a LTR MaLR -108 271 13 1 1172 1681 335 85 50 chr15 76998663 76998719 -26496255 + MTE-int LTR MaLR 58 114 -1466 1 1172 993 195 77 39 chr15 76998719 76998927 -26496047 + B3 SINE B2 1 216 0 1 1172 1681 335 85 50 chr15 76998927 76999936 -26495038 + MTE-int LTR MaLR 115 1161 -419 1 1172 233 307 23 0 chr15 77000008 77000096 -26494878 + MTE-int LTR MaLR 1252 1341 -239 1 1172 398 301 95 7 chr15 77000279 77000426 -26494548 - L1M5 LINE L1 -1421 4725 4566 2 1172 224 314 0 0 chr15 77000854 77000924 -26494050 + ID4_ SINE ID 5 74 -9 3 1172 300 309 115 0 chr15 77000926 77001065 -26493909 + L1ME1 LINE L1 5101 5255 -891 4 1172 2280 77 41 6 chr15 77001066 77001381 -26493593 - ORR1A3 LTR MaLR 0 326 1 5 1172 273 301 21 56 chr15 77001404 77001548 -26493426 + L1ME1 LINE L1 5552 5690 -489 4 1172 428 324 65 38 chr15 77001659 77001951 -26493023 + L1ME1 LINE L1 5865 6164 -15 4 1172 1069 99 0 0 chr15 77001974 77002116 -26492858 + B1_Mus1 SINE Alu 1 142 -6 6 1172 301 93 0 36 chr15 77002125 77002181 -26492793 + (GGA)n Simple_repeat Simple_repeat 3 56 0 7 1172 485 246 87 0 chr15 77003859 77003985 -26490989 + RSINE1 SINE B4 10 146 -19 8 1172 423 185 0 0 chr15 77004476 77004568 -26490406 + (CA)n Simple_repeat Simple_repeat 2 93 0 9 1172 224 284 0 13 chr15 77004799 77004874 -26490100 + (CA)n Simple_repeat Simple_repeat 2 75 0 1 1172 438 167 0 91 chr15 77005468 77005567 -26489407 - PB1D9 SINE Alu -1 119 30 1 1172 222 261 64 64 chr15 77005576 77005670 -26489304 - PB1 SINE Alu -3 124 31 1 1172 477 0 0 0 chr15 77006237 77006290 -26488684 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1172 298 263 187 14 chr15 77006354 77006493 -26488481 + L1MD1 LINE L1 119 281 -6352 1 1172 628 253 127 103 chr15 77006731 77007333 -26487641 + L1MD1 LINE L1 5491 6113 -637 1 1172 335 311 37 21 chr15 77007482 77007669 -26487305 + L1MD1 LINE L1 6170 6359 -274 1 1172 348 261 80 18 chr15 77007752 77007865 -26487109 + L1MD1 LINE L1 6505 6624 -9 1 1172 504 300 107 17 chr15 77007884 77008118 -26486856 + B4A SINE B4 32 286 -6 1 1172 234 97 0 0 chr15 77008182 77008213 -26486761 + L1M3 LINE L1 5209 5239 -901 1 1172 459 236 9 54 chr15 77009170 77009282 -26485692 + B3A SINE B2 4 110 -88 1 1172 240 254 34 0 chr15 77009338 77009397 -26485577 + ID SINE ID 2 62 -162 1 1172 296 314 55 37 chr15 77009548 77009657 -26485317 - PB1D9 SINE Alu -9 111 1 1 1172 685 177 323 0 chr15 77009891 77010049 -26484925 + B3 SINE B2 2 210 -6 2 1172 390 74 0 0 chr15 77010053 77010107 -26484867 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1172 411 155 0 23 chr15 77010118 77010204 -26484770 + B1F1 SINE Alu 64 147 -2 2 1172 254 252 330 0 chr15 77011469 77011572 -26483402 - B1_Mur2 SINE Alu 0 149 13 2 1172 1405 86 16 0 chr15 77011689 77011876 -26483098 + B2_Mm2 SINE B2 2 191 -4 2 1172 229 257 129 0 chr15 77012406 77012476 -26482498 - PB1D9 SINE Alu -37 83 5 2 1172 1504 129 135 25 chr15 77013887 77014013 -26480961 + Lx9 LINE L1 7291 7416 -228 2 1172 234 0 0 0 chr15 77014013 77014039 -26480935 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 1172 1504 129 135 25 chr15 77014039 77014231 -26480743 + Lx9 LINE L1 7417 7643 -1 2 1172 294 151 13 27 chr15 77014232 77014307 -26480667 + GA-rich Low_complexity Low_complexity 1 74 0 2 1172 219 250 0 88 chr15 77014599 77014656 -26480318 - B1F1 SINE Alu -96 53 2 2 1172 2390 113 77 0 chr15 77014744 77015108 -26479866 + ORR1B1 LTR MaLR 1 392 -2 3 1172 332 311 31 39 chr15 77015462 77015589 -26479385 - B1F2 SINE Alu -9 140 15 3 1172 393 75 0 0 chr15 77015793 77015846 -26479128 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 1172 333 0 0 0 chr15 77015846 77015882 -26479092 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 1172 384 258 173 20 chr15 77016137 77016424 -26478550 + MTEa LTR MaLR 29 375 -4 3 1172 21 0 0 0 chr15 77016442 77016463 -26478511 + AT_rich Low_complexity Low_complexity 1 21 0 3 1172 252 0 0 0 chr15 77016583 77016611 -26478363 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1172 847 180 56 61 chr15 77016636 77016849 -26478125 + B3 SINE B2 4 215 -1 3 1172 393 75 0 0 chr15 77017232 77017285 -26477689 + (CAAG)n Simple_repeat Simple_repeat 2 54 0 3 1172 728 138 92 0 chr15 77018272 77018402 -26476572 + B1_Mus1 SINE Alu 6 147 -1 3 1172 329 319 203 42 chr15 77018601 77018961 -26476013 - L2 LINE L2 -347 3072 2655 4 1172 452 198 134 9 chr15 77019101 77019213 -26475761 + RSINE1 SINE B4 1 126 -39 4 1172 330 26 0 0 chr15 77019219 77019258 -26475716 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1172 1273 168 109 20 chr15 77019551 77019855 -26475119 + Lx9 LINE L1 7313 7643 -1 4 1172 565 262 87 44 chr15 77020095 77020370 -26474604 + Looper DNA PiggyBac 433 719 -839 4 1172 606 217 23 0 chr15 77020387 77020516 -26474458 - B1F SINE Alu -17 132 1 4 1172 226 135 54 0 chr15 77020687 77020724 -26474250 + ORR1E LTR MaLR 2 40 -319 4 1172 700 238 22 62 chr15 77021074 77021298 -26473676 - B3 SINE B2 0 216 2 4 1172 349 278 62 0 chr15 77021400 77021497 -26473477 + ID_B1 SINE B4 65 167 -57 4 1172 355 314 29 0 chr15 77021420 77021522 -26473452 + PB1D10 SINE Alu 10 114 -3 4 1172 333 0 0 0 chr15 77022003 77022040 -26472934 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1172 225 211 0 0 chr15 77022076 77022128 -26472846 + GA-rich Low_complexity Low_complexity 5 56 0 5 1172 247 278 86 32 chr15 77022133 77022226 -26472748 - PB1D10 SINE Alu -15 102 5 5 1172 840 283 39 26 chr15 77022958 77023266 -26471708 - MLT1F2-int LTR MaLR -303 1186 875 5 1172 625 262 193 19 chr15 77023417 77023728 -26471246 - MLT1F2-int LTR MaLR -996 493 129 5 1172 1358 89 16 0 chr15 77023756 77023947 -26471027 + B2_Mm2 SINE B2 2 195 0 5 1172 457 253 262 18 chr15 77024033 77024319 -26470655 - MLT1F2 LTR MaLR -5 555 200 5 1172 1189 49 28 0 chr15 77024791 77024934 -26470040 + B1_Mus1 SINE Alu 2 148 0 5 1172 233 336 184 25 chr15 77024989 77025233 -26469741 - L2a LINE L2 -167 3259 2977 5 1172 280 293 0 12 chr15 77025329 77025412 -26469562 + ID4_ SINE ID 2 83 0 5 1172 281 320 63 8 chr15 77025507 77025633 -26469341 + MER5A DNA MER1_type 1 133 -56 5 1172 217 163 0 20 chr15 77027172 77027222 -26467752 + A-rich Low_complexity Low_complexity 6 54 0 5 1172 453 264 86 26 chr15 77028178 77028330 -26466644 - B4 SINE B4 -55 237 77 6 1172 242 278 143 11 chr15 77030619 77030710 -26464264 + PB1D10 SINE Alu 2 104 -23 6 1172 1098 237 28 25 chr15 77031773 77032059 -26462915 - B4A SINE B4 -1 291 5 6 1172 729 227 0 0 chr15 77032086 77032218 -26462756 + B1_Mur2 SINE Alu 5 136 -13 6 1172 189 0 0 0 chr15 77032221 77032242 -26462732 + (CAGA)n Simple_repeat Simple_repeat 4 24 0 6 1172 201 289 12 50 chr15 77033970 77034050 -26460924 + CT-rich Low_complexity Low_complexity 4 80 0 6 1172 474 18 0 0 chr15 77034724 77034779 -26460195 + (TTTCC)n Simple_repeat Simple_repeat 1 55 0 6 1172 745 115 107 0 chr15 77034797 77034919 -26460055 - B1_Mur3 SINE Alu -14 135 1 6 1172 239 247 23 58 chr15 77035117 77035203 -26459771 + PB1D9 SINE Alu 30 112 -8 6 1172 1219 35 14 0 chr15 77035862 77036007 -26458967 - B1_Mus1 SINE Alu 0 148 2 6 1172 392 272 0 0 chr15 77036104 77036203 -26458771 - B1F1 SINE Alu -11 109 11 7 1172 261 0 0 0 chr15 77037099 77037128 -26457846 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 1172 353 248 16 64 chr15 77037181 77037306 -26457668 + PB1D9 SINE Alu 2 120 0 7 1172 286 262 276 0 chr15 77040359 77040504 -26454470 - MER3 DNA MER1_type -24 185 1 7 1172 393 328 0 42 chr15 77041129 77041247 -26453727 + B4A SINE B4 67 179 -113 7 1172 216 0 0 0 chr15 77041253 77041277 -26453697 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 1172 198 103 0 0 chr15 77041389 77041418 -26453556 + (GGGGA)n Simple_repeat Simple_repeat 1 29 0 7 1172 219 36 0 0 chr15 77041592 77041620 -26453354 + (GTTTG)n Simple_repeat Simple_repeat 3 30 0 7 1172 480 252 86 0 chr15 77041887 77042026 -26452948 + RSINE1 SINE B4 3 153 -12 7 1172 207 0 0 0 chr15 77042027 77042050 -26452924 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 7 1172 270 0 0 0 chr15 77042050 77042079 -26452895 + (TC)n Simple_repeat Simple_repeat 1 30 0 8 1172 195 129 0 0 chr15 77042079 77042109 -26452865 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 1172 531 265 108 7 chr15 77042109 77042257 -26452717 - B3 SINE B2 -53 163 1 8 1172 198 0 0 0 chr15 77043948 77043970 -26451004 + (G)n Simple_repeat Simple_repeat 1 22 0 8 1172 835 156 51 28 chr15 77044010 77044188 -26450786 + B3 SINE B2 35 216 0 8 1172 437 245 21 31 chr15 77044233 77044330 -26450644 + RSINE1 SINE B4 56 151 -14 8 1172 279 287 41 41 chr15 77044587 77044685 -26450289 + MIRb SINE MIR 92 189 -79 8 1172 180 158 0 50 chr15 77045522 77045582 -26449392 + GA-rich Low_complexity Low_complexity 3 59 0 8 1172 253 347 82 86 chr15 77046407 77046640 -26448334 + MIRb SINE MIR 29 260 -8 8 1172 290 306 115 63 chr15 77048485 77048754 -26446220 + L1MB8 LINE L1 5879 6161 -17 8 1172 438 306 96 0 chr15 77050242 77050399 -26444575 - MER5A DNA MER1_type -16 173 2 9 1172 364 189 44 11 chr15 77051247 77051302 -26443672 - PB1D9 SINE Alu -6 114 56 9 1172 297 0 0 0 chr15 77051302 77051335 -26443639 + (CA)n Simple_repeat Simple_repeat 1 33 0 9 1172 364 189 44 11 chr15 77051335 77051370 -26443604 - PB1D9 SINE Alu -65 55 22 9 1172 718 290 31 9 chr15 77051764 77051987 -26442987 - B4 SINE B4 -64 228 1 9 1172 970 110 7 0 chr15 77052038 77052183 -26442791 + B2_Mm2 SINE B2 1 146 -49 9 1172 477 34 0 0 chr15 77052183 77052242 -26442732 + (CATA)n Simple_repeat Simple_repeat 1 59 0 9 1172 21 0 0 0 chr15 77052268 77052289 -26442685 + AT_rich Low_complexity Low_complexity 1 21 0 9 1172 378 0 0 0 chr15 77053742 77053784 -26441190 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 1172 286 276 13 0 chr15 77053888 77053964 -26441010 - B3A SINE B2 -120 78 2 9 1172 324 292 36 14 chr15 77055275 77055414 -26439560 + L1MB8 LINE L1 6037 6178 0 9 1172 384 22 0 0 chr15 77056333 77056378 -26438596 + (GA)n Simple_repeat Simple_repeat 1 45 0 1 1172 935 226 16 0 chr15 77056633 77056823 -26438151 + B3 SINE B2 1 193 -23 1 1172 300 274 27 19 chr15 77057958 77058073 -26436901 + PB1D10 SINE Alu 2 117 0 1 1172 781 167 107 6 chr15 77058560 77058729 -26436245 + B3 SINE B2 25 210 -6 1 1172 312 261 27 128 chr15 77058716 77058865 -26436109 + MT2B LTR ERVL 124 257 -344 1 1172 762 157 0 60 chr15 77058762 77058911 -26436063 + B1_Mur3 SINE Alu 6 145 -4 1 1172 793 20 0 0 chr15 77059327 77059428 -26435546 + B1_Mus1 SINE Alu 34 134 -14 1 1172 552 30 0 0 chr15 77059428 77059494 -26435480 + (GA)n Simple_repeat Simple_repeat 1 66 0 1 1172 698 121 8 53 chr15 77060713 77060844 -26434130 - B2_Mm2 SINE B2 -19 176 52 1 1172 888 225 100 44 chr15 77060840 77061091 -26433883 + RLTR33 LTR ERVK 414 678 0 1 1172 709 161 85 0 chr15 77061368 77061498 -26433476 + B1_Mur4 SINE Alu 2 142 -8 1 1172 201 132 0 0 chr15 77061509 77061547 -26433427 + (A)n Simple_repeat Simple_repeat 1 38 0 1 1172 180 0 0 0 chr15 77061876 77061896 -26433078 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1 1172 1154 59 7 0 chr15 77063078 77063230 -26431744 + B2_Mm2 SINE B2 1 153 -42 1 1172 197 33 0 32 chr15 77063232 77063263 -26431711 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 1 1172 390 206 41 0 chr15 77063573 77063646 -26431328 - ID4_ SINE ID -6 77 2 1 1172 681 262 183 13 chr15 77063679 77063734 -26431240 + L1MB7 LINE L1 4761 4826 -1320 1 1172 240 111 0 0 chr15 77063734 77063770 -26431204 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1172 681 262 183 13 chr15 77063770 77064167 -26430807 + L1MB7 LINE L1 4827 5289 -857 1 1172 617 267 36 15 chr15 77064422 77064631 -26430343 + B3A SINE B2 11 216 0 1 1172 437 314 46 30 chr15 77064799 77065062 -26429912 + L1MB7 LINE L1 5849 6115 -69 1 1172 325 275 162 68 chr15 77065122 77065270 -26429704 + RSINE1 SINE B4 2 163 -2 1 1172 1645 73 45 4 chr15 77067136 77067382 -26427592 + ORR1A2 LTR MaLR 1 256 -71 1 1172 583 249 55 110 chr15 77067382 77067827 -26427147 - L1M4 LINE L1 -606 5572 5167 1 1172 444 252 18 9 chr15 77067827 77067939 -26427035 - PB1D10 SINE Alu 0 117 5 1 1172 382 272 50 146 chr15 77067939 77068083 -26426891 - L1M4 LINE L1 -980 5166 5033 1 1172 359 243 168 0 chr15 77068262 77068369 -26426605 + LTR41 LTR ERVL 71 195 -573 1 1172 311 328 139 0 chr15 77068459 77068581 -26426393 + LTR41 LTR ERVL 414 552 -216 1 1172 605 183 109 143 chr15 77068647 77068857 -26426117 + Lx5 LINE L1 6845 7047 -3 1 1172 230 250 83 0 chr15 77069321 77069381 -26425593 + MER68 LTR ERVL 77 141 -422 1 1172 543 279 32 0 chr15 77070002 77070156 -26424818 + L1M4 LINE L1 5523 5681 -493 1 1173 939 222 31 10 chr15 77070519 77070715 -26424259 + B3 SINE B2 1 200 -16 1 1173 687 298 98 7 chr15 77070850 77071157 -26423817 + MER2 DNA MER2_type 9 343 -2 1 1173 229 359 22 51 chr15 77071159 77071297 -26423677 - MIRc SINE MIR -113 155 22 1 1173 799 132 20 34 chr15 77071533 77071682 -26423292 + B1_Mur3 SINE Alu 2 148 -1 1 1173 1126 82 0 13 chr15 77071924 77072073 -26422901 - B1_Mus2 SINE Alu 0 147 1 1 1173 811 260 9 42 chr15 77072544 77072761 -26422213 - B3 SINE B2 -5 211 2 1 1173 567 161 178 0 chr15 77072859 77072977 -26421997 - U1 snRNA snRNA -22 143 5 1 1173 217 202 153 12 chr15 77073432 77073517 -26421457 - MIRb SINE MIR -103 165 69 1 1173 644 279 91 38 chr15 77074046 77074310 -26420664 - B4A SINE B4 -13 279 2 1 1173 646 235 59 0 chr15 77074372 77074508 -26420466 - RSINE1 SINE B4 -19 146 3 1 1173 305 274 12 0 chr15 77074509 77074593 -26420381 - PB1D10 SINE Alu 0 117 33 1 1173 192 278 138 31 chr15 77074674 77074851 -26420123 - MIR SINE MIR -50 212 29 1 1173 245 319 136 82 chr15 77074890 77075355 -26419619 - MARNA DNA Mariner -61 525 36 1 1173 242 202 71 71 chr15 77078232 77078317 -26416657 - ID SINE ID -139 85 1 1 1173 299 320 21 0 chr15 77078430 77078527 -26416447 + MamSINE1 SINE tRNA 13 111 -179 1 1173 269 316 100 30 chr15 77079497 77079768 -26415206 - L1ME3A LINE L1 -7 6166 5877 1 1173 977 243 122 41 chr15 77079899 77080242 -26414732 - MTEa LTR MaLR -8 371 1 1 1173 226 259 17 0 chr15 77080252 77080310 -26414664 - L1ME3A LINE L1 -459 5714 5656 1 1173 4158 231 52 88 chr15 77080524 77081058 -26413916 + Lx5 LINE L1 5941 6452 -598 1 1173 270 0 0 0 chr15 77081058 77081088 -26413886 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 1 1173 4158 231 52 88 chr15 77081088 77081704 -26413270 + Lx5 LINE L1 6453 7050 0 1 1173 246 321 71 27 chr15 77082941 77083053 -26411921 - PB1D10 SINE Alu 0 117 1 1 1173 492 248 17 0 chr15 77084314 77084431 -26410543 + RSINE1 SINE B4 4 122 -43 1 1173 633 27 0 0 chr15 77085356 77085431 -26409543 + (GGGGA)n Simple_repeat Simple_repeat 5 79 0 1 1173 397 288 67 11 chr15 77086547 77086726 -26408248 + MER2 DNA MER2_type 100 288 -57 1 1173 1977 144 189 30 chr15 77087466 77087868 -26407106 + RMER4A LTR ERVK 1 466 0 1 1173 243 0 0 0 chr15 77088101 77088128 -26406846 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1173 342 0 0 0 chr15 77088236 77088274 -26406700 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1173 414 284 93 93 chr15 77088603 77088914 -26406060 - MER5C DNA MER1_type 0 313 3 1 1173 309 326 63 42 chr15 77088920 77089127 -26405847 + MIRb SINE MIR 16 231 -37 1 1173 782 155 0 0 chr15 77090029 77090158 -26404816 + B1_Mur4 SINE Alu 2 130 -20 1 1173 1269 70 0 6 chr15 77090501 77090673 -26404301 - B2_Mm2 SINE B2 -24 171 1 1 1173 341 259 0 23 chr15 77090696 77090783 -26404191 - ORR1E LTR MaLR -251 108 24 1 1173 800 174 19 108 chr15 77090846 77091059 -26403915 + B2_Mm2 SINE B2 2 195 0 1 1173 240 207 186 17 chr15 77091070 77091129 -26403845 + ID4_ SINE ID 2 70 -13 1 1173 256 214 155 20 chr15 77091142 77091290 -26403684 + L1MD LINE L1 5317 5484 -2511 1 1173 5382 66 27 9 chr15 77091421 77092122 -26402852 + L1Md_F2 LINE L1 5868 6581 -1 1 1173 21 0 0 0 chr15 77092164 77092185 -26402789 + AT_rich Low_complexity Low_complexity 1 21 0 1 1173 423 0 0 0 chr15 77092185 77092232 -26402742 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1173 4707 133 93 236 chr15 77092463 77093031 -26401943 + ORR1B1-int LTR MaLR 336 718 -1245 1 1173 1722 21 0 0 chr15 77093031 77093224 -26401750 + B2_Mm1a SINE B2 1 193 0 1 1173 4707 135 92 233 chr15 77093224 77094504 -26400470 + ORR1B1-int LTR MaLR 719 1905 -58 1 1173 2108 128 101 0 chr15 77094521 77094879 -26400095 + ORR1B1 LTR MaLR 1 394 0 1 1173 574 249 67 94 chr15 77094907 77095248 -26399726 + L1MC4 LINE L1 6713 7044 -998 1 1173 308 230 68 0 chr15 77095388 77095462 -26399512 + ID4 SINE ID 1 79 -4 1 1173 628 294 86 41 chr15 77095784 77096053 -26398921 + B4 SINE B4 12 292 0 1 1173 820 47 39 39 chr15 77096064 77096243 -26398731 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 1173 249 57 0 0 chr15 77096280 77096315 -26398659 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 1 1173 231 61 0 0 chr15 77097488 77097521 -26397453 + (A)n Simple_repeat Simple_repeat 1 33 0 1 1173 22 0 0 0 chr15 77098365 77098387 -26396587 + AT_rich Low_complexity Low_complexity 1 22 0 1 1173 203 287 41 57 chr15 77098554 77098676 -26396298 - MER5B DNA MER1_type -42 136 17 1 1173 590 149 0 11 chr15 77099239 77099334 -26395640 + Lx5 LINE L1 4727 4820 -1057 1 1173 1034 82 0 0 chr15 77099334 77099480 -26395494 + B1_Mus1 SINE Alu 3 148 0 1 1173 4504 142 73 18 chr15 77099489 77100338 -26394636 + Lx5 LINE L1 4838 5741 -1309 1 1173 517 206 18 36 chr15 77100352 77100463 -26394511 - B1_Mur1 SINE Alu -38 111 3 1 1173 27 0 0 0 chr15 77100474 77100501 -26394473 + AT_rich Low_complexity Low_complexity 1 27 0 1 1173 595 248 0 36 chr15 77100787 77100925 -26394049 + ID_B1 SINE B4 83 215 -9 1 1173 213 39 0 0 chr15 77100970 77100996 -26393978 + (CACG)n Simple_repeat Simple_repeat 1 26 0 1 1173 696 252 58 58 chr15 77101063 77101286 -26393688 + ID_B1 SINE B4 1 223 -1 1 1173 303 233 66 28 chr15 77102015 77102121 -26392853 + PB1D9 SINE Alu 11 120 0 1 1173 180 0 0 0 chr15 77103270 77103290 -26391684 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 1 1173 508 121 2 6 chr15 77103433 77103523 -26391451 - B1_Mur4 SINE Alu -16 133 46 1 1173 473 147 262 49 chr15 77105070 77105192 -26389782 + B1_Mur4 SINE Alu 1 148 -2 1 1173 470 73 0 0 chr15 77106589 77106657 -26388317 - B1_Mur4 SINE Alu -2 148 81 1 1173 323 303 32 24 chr15 77106916 77107041 -26387933 + ID_B1 SINE B4 99 224 0 1 1173 481 235 116 68 chr15 77108319 77108570 -26386404 - MER33 DNA MER1_type -49 275 13 1 1173 735 160 0 111 chr15 77108860 77109022 -26385952 + B1_Mur3 SINE Alu 1 144 -5 1 1173 395 255 195 7 chr15 77109036 77109190 -26385784 + B3 SINE B2 24 206 -10 1 1173 408 281 84 132 chr15 77110697 77110984 -26383990 + B4 SINE B4 20 292 0 1 1173 357 188 321 0 chr15 77111692 77111804 -26383170 + B1F2 SINE Alu 1 148 -1 1 1173 648 208 58 0 chr15 77112123 77112243 -26382731 + ID_B1 SINE B4 98 224 0 1 1173 591 256 39 7 chr15 77113156 77113324 -26381650 - B3 SINE B2 -6 192 11 1 1173 571 250 129 11 chr15 77113379 77113557 -26381417 - RMER30 DNA MER1_type -2 200 2 1 1173 424 287 20 0 chr15 77114071 77114172 -26380802 + PB1D7 SINE Alu 13 115 -5 1 1173 323 229 95 9 chr15 77114296 77114395 -26380579 + B1F SINE Alu 13 120 0 1 1173 563 195 106 0 chr15 77114407 77114520 -26380454 + B1_Mur3 SINE Alu 23 147 -2 1 1173 450 0 0 0 chr15 77114654 77114704 -26380270 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1173 567 230 26 0 chr15 77114764 77114877 -26380097 + PB1D10 SINE Alu 2 117 0 1 1173 21 57 0 0 chr15 77114879 77114914 -26380060 + AT_rich Low_complexity Low_complexity 1 35 0 2 1173 709 214 21 0 chr15 77115912 77116057 -26378917 + B3 SINE B2 66 213 -3 2 1173 387 295 19 9 chr15 77116060 77116166 -26378808 - U6 snRNA snRNA 0 107 1 2 1173 269 290 101 18 chr15 77116171 77116280 -26378694 - PB1D9 SINE Alu 0 120 3 2 1173 279 303 0 0 chr15 77117230 77117306 -26377668 - ID4 SINE ID -6 77 2 2 1173 1360 201 111 32 chr15 77118249 77118590 -26376384 + ORR1D1 LTR MaLR 11 378 0 2 1173 1649 251 123 164 chr15 77118610 77119563 -26375411 + RCHARR1 DNA MER1_type 4 917 -57 2 1173 949 235 24 24 chr15 77119499 77119704 -26375270 - B3 SINE B2 -5 211 7 2 1173 415 230 10 0 chr15 77119704 77119804 -26375170 + RCHARR1 DNA MER1_type 838 938 -36 2 1173 1460 306 121 47 chr15 77119812 77120636 -26374338 + Lx8 LINE L1 6423 7307 -166 2 1173 593 213 122 8 chr15 77120730 77120853 -26374121 + RSINE1 SINE B4 3 139 -26 2 1173 1036 220 9 32 chr15 77120888 77121104 -26373870 - B3 SINE B2 -3 213 3 2 1173 363 248 124 46 chr15 77121412 77121624 -26373350 - MIRb SINE MIR -34 234 1 2 1173 686 154 114 0 chr15 77122439 77122562 -26372412 + B1_Mus2 SINE Alu 6 142 -5 2 1173 430 289 14 43 chr15 77123563 77123578 -26371396 + ID_B1 SINE B4 79 215 -9 2 1173 686 208 16 8 chr15 77123578 77123704 -26371270 + B1_Mur1 SINE Alu 14 140 -9 2 1173 318 193 18 0 chr15 77124102 77124159 -26370815 + B1F1 SINE Alu 1 58 -91 2 1173 599 162 0 28 chr15 77124951 77125059 -26369915 + B1_Mus2 SINE Alu 43 147 0 2 1173 206 32 0 31 chr15 77125062 77125094 -26369880 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1173 1402 82 16 0 chr15 77125403 77125587 -26369387 + B2_Mm2 SINE B2 1 187 -8 2 1173 421 266 156 0 chr15 77126047 77126156 -26368818 + ID_B1 SINE B4 82 207 -17 2 1173 1390 75 21 0 chr15 77127527 77127713 -26367261 + B2_Mm1t SINE B2 2 191 -2 2 1173 854 140 14 35 chr15 77127725 77127866 -26367108 + B1_Mur4 SINE Alu 1 138 -12 2 1173 234 0 0 0 chr15 77127866 77127892 -26367082 + (CAA)n Simple_repeat Simple_repeat 1 26 0 2 1173 729 204 13 39 chr15 77127904 77128057 -26366917 + B1_Mur3 SINE Alu 1 149 0 2 1173 56 76 0 0 chr15 77128064 77128183 -26366791 + AT_rich Low_complexity Low_complexity 1 119 0 2 1173 229 263 221 33 chr15 77128857 77128979 -26365995 + 7SLRNA srpRNA srpRNA 176 320 0 2 1173 735 284 86 19 chr15 77129488 77129757 -26365217 + B4A SINE B4 1 287 -5 2 1173 300 53 0 0 chr15 77129779 77129817 -26365157 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1173 993 84 161 6 chr15 77129884 77130052 -26364922 - B2_Mm2 SINE B2 0 195 2 2 1173 207 326 213 0 chr15 77130876 77131017 -26363957 - MIRb SINE MIR -42 226 56 2 1173 612 244 188 28 chr15 77131251 77131432 -26363542 + B3 SINE B2 1 210 -6 2 1173 22 0 0 0 chr15 77132404 77132426 -26362548 + AT_rich Low_complexity Low_complexity 1 22 0 2 1173 450 291 130 88 chr15 77132469 77132497 -26362477 + MLT1A LTR MaLR 18 41 -349 2 1173 402 153 333 0 chr15 77132497 77132608 -26362366 + B1_Mus1 SINE Alu 1 148 0 2 1173 741 291 130 87 chr15 77132608 77132937 -26362037 + MLT1A LTR MaLR 30 386 -4 2 1173 304 227 12 82 chr15 77133222 77133307 -26361667 + B1F SINE Alu 44 143 -6 2 1173 403 182 65 0 chr15 77133320 77133397 -26361577 + ID4_ SINE ID 2 83 0 2 1173 538 65 26 0 chr15 77133894 77133971 -26361003 + B1_Mur4 SINE Alu 71 149 -1 2 1173 216 97 0 0 chr15 77133974 77134005 -26360969 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1173 497 214 0 37 chr15 77134437 77134544 -26360430 + B1_Mur3 SINE Alu 46 148 -1 2 1173 480 183 8 122 chr15 77134871 77135002 -26359972 + ID_B1 SINE B4 109 224 0 2 1173 288 290 222 16 chr15 77135637 77135763 -26359211 + MIR3 SINE MIR 6 157 -51 2 1173 234 232 0 115 chr15 77135858 77135936 -26359038 + L3 LINE CR1 4419 4487 -2 2 1173 232 242 0 43 chr15 77136328 77136397 -26358577 + MER74C LTR ERVL 63 128 -332 2 1173 30 0 0 0 chr15 77137058 77137088 -26357886 + GC_rich Low_complexity Low_complexity 1 30 0 2 1173 247 247 24 0 chr15 77137217 77137302 -26357672 + (CTCG)n Simple_repeat Simple_repeat 4 90 0 2 1173 21 36 0 0 chr15 77137559 77137587 -26357387 + GC_rich Low_complexity Low_complexity 1 28 0 2 1173 677 167 43 43 chr15 77137940 77138078 -26356896 + B1_Mus1 SINE Alu 2 139 -9 2 1173 516 301 55 0 chr15 77138574 77138720 -26356254 + MER20 DNA MER1_type 64 217 -2 2 1173 310 307 41 52 chr15 77138983 77139155 -26355819 + MIR SINE MIR 49 218 -44 2 1173 216 0 0 0 chr15 77139298 77139322 -26355652 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1173 246 360 35 54 chr15 77139322 77139601 -26355373 + MTEa LTR MaLR 91 377 -2 2 1173 240 105 0 0 chr15 77139668 77139689 -26355285 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1173 1186 74 0 0 chr15 77139689 77139837 -26355137 - B1_Mus1 SINE Alu 0 148 1 2 1173 240 105 0 0 chr15 77139837 77139853 -26355121 + (T)n Simple_repeat Simple_repeat 1 16 0 2 1173 637 314 12 6 chr15 77139903 77140063 -26354911 - RSINE1 SINE B4 -2 163 3 2 1173 2954 78 22 29 chr15 77140150 77140560 -26354414 - MTB_Mm LTR MaLR 0 407 1 2 1173 233 336 140 42 chr15 77140978 77141121 -26353853 + MIRb SINE MIR 104 260 -8 2 1173 937 215 28 9 chr15 77141733 77141944 -26353030 + B3 SINE B2 2 216 0 2 1173 511 200 85 52 chr15 77142067 77142220 -26352754 + RMER15 LTR ERVL 3 160 -415 2 1173 656 335 30 58 chr15 77142224 77142519 -26352455 + RMER15 LTR ERVL 289 575 0 2 1173 513 285 162 28 chr15 77142568 77142821 -26352153 + B4A SINE B4 6 292 0 2 1173 221 85 66 33 chr15 77142889 77142950 -26352024 + (TTATA)n Simple_repeat Simple_repeat 3 65 0 2 1173 1204 68 0 0 chr15 77143067 77143214 -26351760 - B1_Mus2 SINE Alu 0 147 1 2 1173 246 343 52 15 chr15 77143283 77143419 -26351555 + MLT1J LTR MaLR 372 512 0 2 1173 273 247 120 33 chr15 77143419 77143511 -26351463 + MIRb SINE MIR 138 237 -31 2 1173 186 396 0 40 chr15 77143605 77143705 -26351269 - L2b LINE L2 -176 3199 3104 2 1173 265 21 61 41 chr15 77143822 77143871 -26351103 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 2 1173 1458 64 32 0 chr15 77143891 77144079 -26350895 - B2_Mm2 SINE B2 0 195 2 2 1173 324 297 11 42 chr15 77144093 77144188 -26350786 - RSINE1 SINE B4 -72 93 2 2 1173 231 36 0 0 chr15 77144586 77144614 -26350360 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 1173 241 119 0 0 chr15 77144614 77144645 -26350329 - B1_Mus2 SINE Alu -12 135 105 2 1173 738 34 0 0 chr15 77145072 77145161 -26349813 + (GGGAA)n Simple_repeat Simple_repeat 1 89 0 2 1173 638 148 0 9 chr15 77145848 77145964 -26349010 + CT-rich Low_complexity Low_complexity 3 117 0 2 1173 480 262 139 6 chr15 77145968 77146141 -26348833 - MIRc SINE MIR -70 198 3 2 1173 355 241 12 24 chr15 77146262 77146347 -26348627 - B1_Mur1 SINE Alu -1 148 65 2 1173 183 100 0 0 chr15 77146454 77146484 -26348490 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 2 1173 932 106 0 72 chr15 77146487 77146640 -26348334 - B1_Mur4 SINE Alu -7 143 2 2 1173 213 39 0 0 chr15 77146711 77146737 -26348237 + (GA)n Simple_repeat Simple_repeat 1 26 0 2 1173 324 103 0 0 chr15 77146992 77147050 -26347924 + (A)n Simple_repeat Simple_repeat 1 58 0 2 1173 238 297 16 0 chr15 77147529 77147593 -26347381 - LTR81A LTR ERV1? -1164 186 122 2 1173 980 258 3 75 chr15 77147643 77147949 -26347025 - B4A SINE B4 -6 286 3 2 1173 505 322 36 50 chr15 77148370 77148589 -26346385 - B3 SINE B2 0 216 1 2 1173 1106 173 34 5 chr15 77148598 77148807 -26346167 - B3 SINE B2 0 216 2 2 1173 1234 72 0 12 chr15 77148834 77149002 -26345972 - B2_Mm2 SINE B2 -23 172 7 2 1173 189 0 0 0 chr15 77149122 77149143 -26345831 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2 1173 670 157 8 76 chr15 77149143 77149266 -26345708 - B1_Mus1 SINE Alu -9 139 24 2 1173 360 253 11 46 chr15 77149247 77149334 -26345640 + PB1D10 SINE Alu 33 116 -1 2 1173 3926 195 92 46 chr15 77149379 77150266 -26344708 + RMER1B Other Other 127 1054 -12 2 1173 315 343 7 28 chr15 77150568 77150709 -26344265 - LTR79 LTR ERVL -275 252 115 2 1173 2505 135 11 13 chr15 77150871 77151253 -26343721 + ORR1B1 LTR MaLR 1 381 -13 2 1173 1156 44 0 0 chr15 77151262 77151397 -26343577 + B1_Mus2 SINE Alu 1 135 -12 2 1173 216 86 0 0 chr15 77151398 77151433 -26343541 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1173 593 322 59 58 chr15 77152003 77152621 -26342353 + Lx7 LINE L1 5516 6156 -1317 2 1173 603 267 106 11 chr15 77152687 77152876 -26342098 - B3 SINE B2 -9 207 1 2 1173 955 106 0 0 chr15 77152907 77153039 -26341935 - B1_Mus1 SINE Alu -16 132 1 2 1173 1218 54 0 0 chr15 77153061 77153208 -26341766 + B1_Mus2 SINE Alu 1 147 0 2 1173 381 43 0 0 chr15 77153213 77153260 -26341714 + (A)n Simple_repeat Simple_repeat 1 47 0 2 1173 1127 248 149 2 chr15 77153262 77153559 -26341415 + L1MA8 LINE L1 5814 6165 -126 2 1173 252 0 0 0 chr15 77153559 77153587 -26341387 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 1173 1127 248 149 2 chr15 77153587 77153706 -26341268 + L1MA8 LINE L1 6166 6290 -1 2 1173 1264 86 11 22 chr15 77154402 77154581 -26340393 + B2_Mm2 SINE B2 2 178 -17 2 1173 545 256 8 0 chr15 77154963 77155096 -26339878 - RSINE1 SINE B4 -28 137 4 2 1173 225 280 84 21 chr15 77155278 77155373 -26339601 - ORR1E LTR MaLR -255 104 4 3 1173 731 278 120 48 chr15 77155419 77155752 -26339222 - ORR1E LTR MaLR -2 357 1 3 1173 22 0 0 0 chr15 77155818 77155840 -26339134 + AT_rich Low_complexity Low_complexity 1 22 0 3 1173 1169 58 0 0 chr15 77156387 77156524 -26338450 + B1_Mm SINE Alu 1 137 -10 3 1173 228 35 0 0 chr15 77156524 77156553 -26338421 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1173 300 321 19 91 chr15 77156576 77156730 -26338244 - RSINE1 SINE B4 -10 155 13 3 1173 224 235 282 0 chr15 77156889 77156974 -26338000 - PB1D9 SINE Alu -11 109 1 3 1173 448 353 58 5 chr15 77156974 77157164 -26337810 - MER2 DNA MER2_type -120 225 26 3 1173 207 0 0 0 chr15 77157418 77157441 -26337533 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 3 1173 219 150 0 0 chr15 77157594 77157634 -26337340 + (T)n Simple_repeat Simple_repeat 1 40 0 3 1173 279 0 0 0 chr15 77157687 77157718 -26337256 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 3 1173 1054 74 0 22 chr15 77157718 77157856 -26337118 - B1_Mus1 SINE Alu -13 135 1 3 1173 1144 187 10 5 chr15 77157856 77158055 -26336919 - B3 SINE B2 -15 201 2 3 1173 557 264 41 0 chr15 77158114 77158235 -26336739 - RSINE1 SINE B4 -10 155 30 3 1173 429 200 31 21 chr15 77158235 77158332 -26336642 - RSINE1 SINE B4 -63 102 5 3 1173 235 279 29 0 chr15 77158373 77158441 -26336533 - B1F SINE Alu -79 70 1 3 1173 237 308 31 55 chr15 77158441 77158561 -26336413 + Charlie1a DNA MER1_type 1335 1451 -4 3 1173 982 216 21 11 chr15 77158715 77158902 -26336072 + B3A SINE B2 9 197 -1 3 1173 359 313 38 62 chr15 77158909 77158932 -26336042 + RMER10A LTR ERVL 131 153 -448 3 1173 1224 81 6 34 chr15 77158932 77159096 -26335878 + B2_Mm1a SINE B2 2 160 -33 3 1173 468 0 0 0 chr15 77159096 77159148 -26335826 + (TAAA)n Simple_repeat Simple_repeat 3 54 0 3 1173 1224 81 6 34 chr15 77159148 77159161 -26335813 + B2_Mm1a SINE B2 161 173 -20 3 1173 1065 224 59 24 chr15 77159161 77159182 -26335792 + RMER10A LTR ERVL 2 23 -419 3 1173 495 180 22 0 chr15 77159182 77159271 -26335703 + B1_Mus1 SINE Alu 12 102 -46 3 1173 1065 224 59 24 chr15 77159271 77159657 -26335317 + RMER10A LTR ERVL 24 442 0 3 1173 307 234 0 0 chr15 77159657 77159721 -26335253 + B1_Mus2 SINE Alu 83 146 -1 3 1173 379 186 10 10 chr15 77160846 77160944 -26334030 + CT-rich Low_complexity Low_complexity 1 98 0 3 1173 299 65 0 21 chr15 77161029 77161076 -26333898 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 3 1173 251 247 204 10 chr15 77161272 77161296 -26333678 - PB1D10 SINE Alu 0 117 5 3 1173 255 261 43 14 chr15 77161296 77161366 -26333608 - ID_B1 SINE B4 -67 157 86 3 1173 604 234 0 99 chr15 77161376 77161518 -26333456 - B1_Mur1 SINE Alu -1 148 21 3 1173 276 232 0 0 chr15 77161530 77161655 -26333319 + (CA)n Simple_repeat Simple_repeat 1 125 0 3 1173 219 215 0 0 chr15 77161710 77161775 -26333199 + (CATA)n Simple_repeat Simple_repeat 4 68 0 3 1173 336 24 0 0 chr15 77161775 77161816 -26333158 + (TC)n Simple_repeat Simple_repeat 1 41 0 3 1173 279 0 0 0 chr15 77161816 77161846 -26333128 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1173 367 274 113 43 chr15 77161848 77162104 -26332870 - HAL1 LINE L1 -1561 946 673 3 1173 800 257 24 28 chr15 77162230 77162442 -26332532 - B3 SINE B2 -5 211 1 3 1173 400 310 0 91 chr15 77162462 77162572 -26332402 - PB1D7 SINE Alu 0 120 21 3 1173 354 181 141 51 chr15 77162634 77162760 -26332214 - PB1D10 SINE Alu 0 149 23 3 1173 1056 160 145 13 chr15 77163082 77163310 -26331664 + RLTR11A LTR ERVK 1 258 -270 3 1173 192 77 0 0 chr15 77163310 77163336 -26331638 + (AGGGGG)n Simple_repeat Simple_repeat 1 26 0 3 1173 433 220 116 85 chr15 77163353 77163411 -26331563 + Charlie1a DNA MER1_type 805 864 -591 3 1173 1414 68 5 16 chr15 77163411 77163604 -26331370 + B2_Mm1a SINE B2 2 192 -1 3 1173 433 220 116 85 chr15 77163604 77163709 -26331265 + Charlie1a DNA MER1_type 865 973 -482 3 1173 970 204 18 51 chr15 77163710 77163927 -26331047 + B3 SINE B2 1 210 -6 3 1173 927 236 38 14 chr15 77163964 77164175 -26330799 + B3 SINE B2 1 216 0 3 1173 238 275 87 0 chr15 77164186 77164255 -26330719 + Charlie1a DNA MER1_type 958 1032 -423 3 1173 213 39 0 0 chr15 77164342 77164368 -26330606 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1173 256 352 47 93 chr15 77164449 77164913 -26330061 + L2b LINE L2 2930 3372 -3 3 1173 532 319 68 4 chr15 77164993 77165224 -26329750 - MIRb SINE MIR -8 260 2 3 1173 1518 58 37 0 chr15 77165555 77165743 -26329231 + B2_Mm2 SINE B2 1 195 0 3 1173 222 37 0 0 chr15 77165743 77165770 -26329204 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1173 617 261 8 137 chr15 77165809 77166058 -26328916 - ID_B1 SINE B4 -6 218 2 3 1173 906 222 10 41 chr15 77166079 77166276 -26328698 - B3 SINE B2 -2 214 24 3 1173 237 342 89 38 chr15 77167357 77167515 -26327459 - MIR SINE MIR -45 217 52 3 1173 353 318 35 62 chr15 77167744 77167961 -26327013 + MLT2C1 LTR ERVL 156 522 -34 3 1173 231 146 0 0 chr15 77168433 77168474 -26326500 + (CCA)n Simple_repeat Simple_repeat 1 41 0 3 1173 411 211 78 0 chr15 77169283 77169373 -26325601 - MER53 DNA hAT -7 186 90 3 1173 436 241 231 8 chr15 77169383 77169433 -26325541 + ID SINE ID 3 82 -142 3 1173 269 282 68 68 chr15 77169433 77169551 -26325423 + PB1D7 SINE Alu 3 120 0 3 1173 234 322 11 0 chr15 77169845 77169935 -26325039 - PB1D10 SINE Alu -26 91 1 3 1173 1407 83 5 0 chr15 77170091 77170284 -26324690 + B2_Mm2 SINE B2 2 195 0 3 1173 1194 88 43 21 chr15 77171406 77171593 -26323381 + B2_Mm1t SINE B2 2 192 -1 3 1173 706 109 109 0 chr15 77172134 77172253 -26322721 - URR1B DNA MER1_type 0 225 94 3 1173 1198 41 0 0 chr15 77172264 77172409 -26322565 + B1_Mus1 SINE Alu 2 146 -2 3 1173 463 204 9 44 chr15 77172450 77172563 -26322411 - URR1B DNA MER1_type -111 114 6 3 1173 448 316 19 78 chr15 77173235 77173441 -26321533 - MIRc SINE MIR -37 231 38 3 1173 278 316 43 17 chr15 77175260 77175376 -26319598 - MIRc SINE MIR -111 157 39 3 1173 522 234 0 0 chr15 77175688 77175863 -26319111 + (TG)n Simple_repeat Simple_repeat 1 175 0 3 1173 285 271 0 0 chr15 77175875 77176052 -26318922 + (TG)n Simple_repeat Simple_repeat 2 178 0 3 1173 702 189 0 0 chr15 77176097 77176277 -26318697 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1173 349 301 107 60 chr15 77176477 77176693 -26318281 - MLT1A LTR MaLR -32 342 117 3 1173 329 225 14 0 chr15 77176677 77176748 -26318226 + B4A SINE B4 201 272 -20 3 1173 414 0 0 0 chr15 77176758 77176804 -26318170 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1173 716 237 30 50 chr15 77176967 77177167 -26317807 - B3A SINE B2 -2 196 1 3 1173 1561 47 0 0 chr15 77177207 77177400 -26317574 - B2_Mm1t SINE B2 0 193 1 3 1173 253 241 0 17 chr15 77177685 77177744 -26317230 + (TATG)n Simple_repeat Simple_repeat 1 58 0 3 1173 969 286 78 0 chr15 77177752 77178021 -26316953 - B4A SINE B4 -2 290 1 3 1173 1149 257 67 31 chr15 77178102 77178459 -26316515 - ORR1D2 LTR MaLR 0 370 1 3 1173 2787 90 55 0 chr15 77178926 77179348 -26315626 + BGLII_A LTR ERVK 1 445 0 3 1173 22 0 0 0 chr15 77179495 77179517 -26315457 + AT_rich Low_complexity Low_complexity 1 22 0 3 1173 844 104 0 0 chr15 77179606 77179731 -26315243 - B1_Mus1 SINE Alu 0 148 24 3 1173 979 220 5 9 chr15 77179793 77180009 -26314965 + B3 SINE B2 2 216 0 3 1173 29 0 0 0 chr15 77180009 77180038 -26314936 + AT_rich Low_complexity Low_complexity 1 29 0 3 1173 277 286 43 21 chr15 77180266 77180359 -26314615 - RSINE1 SINE B4 -69 96 2 3 1173 347 325 22 77 chr15 77180436 77180539 -26314435 + ID_B1 SINE B4 7 104 -120 3 1173 525 32 0 0 chr15 77180539 77180602 -26314372 + (CAAG)n Simple_repeat Simple_repeat 1 63 0 3 1173 347 325 22 77 chr15 77180602 77180681 -26314293 + ID_B1 SINE B4 105 179 -45 3 1173 379 228 0 42 chr15 77180603 77180699 -26314275 + PB1D10 SINE Alu 24 115 -2 3 1173 3297 30 2 0 chr15 77181014 77181409 -26313565 - MTA_Mm LTR MaLR 0 396 1 3 1173 8981 28 2 1 chr15 77181409 77182506 -26312468 - MTA_Mm-int LTR MaLR 0 1098 1 3 1173 549 0 0 0 chr15 77182506 77182571 -26312403 - MTA_Mm LTR MaLR 0 400 336 3 1173 1608 20 10 0 chr15 77182552 77182755 -26312219 + MTA_Mm LTR MaLR 192 396 0 3 1173 1188 47 23 12 chr15 77182755 77182925 -26312049 + B2_Mm1a SINE B2 21 192 -1 3 1173 264 246 87 123 chr15 77183739 77183934 -26311040 + ID_B1 SINE B4 5 192 -32 3 1173 475 95 10 125 chr15 77183839 77183935 -26311039 + B1_Mus1 SINE Alu 1 85 -63 3 1173 201 274 0 0 chr15 77184011 77184084 -26310890 + (CA)n Simple_repeat Simple_repeat 2 74 0 3 1173 670 127 16 0 chr15 77184167 77184293 -26310681 + (CA)n Simple_repeat Simple_repeat 1 128 0 3 1173 181 338 40 0 chr15 77184539 77184613 -26310361 - MIR SINE MIR -142 120 44 3 1173 691 141 51 13 chr15 77184667 77184825 -26310149 - Lx5 LINE L1 0 7050 6887 3 1173 279 0 0 0 chr15 77184898 77184929 -26310045 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1173 215 219 51 64 chr15 77185304 77185382 -26309592 + MamSINE1 SINE tRNA 15 91 -199 3 1173 341 200 29 126 chr15 77185823 77185926 -26309048 + L2a LINE L2 3318 3410 -16 3 1173 250 364 0 83 chr15 77186201 77186357 -26308617 - MIR SINE MIR 0 262 120 3 1173 340 245 150 48 chr15 77186527 77186694 -26308280 + L1MD1 LINE L1 5844 6027 -215 3 1173 441 245 19 0 chr15 77186715 77186821 -26308153 + RSINE1 SINE B4 13 120 -45 3 1173 206 139 0 44 chr15 77186846 77186891 -26308083 + C-rich Low_complexity Low_complexity 2 44 0 3 1173 184 338 74 79 chr15 77187716 77187931 -26307043 + MIRb SINE MIR 55 268 0 3 1173 440 373 136 43 chr15 77188014 77188278 -26306696 - MLT1I LTR MaLR 0 411 110 3 1173 984 190 59 108 chr15 77188278 77188584 -26306390 - B4A SINE B4 -1 291 1 3 1173 440 373 136 43 chr15 77188584 77188694 -26306280 - MLT1I LTR MaLR -302 109 2 3 1173 546 79 0 0 chr15 77188805 77188881 -26306093 + (CAGGG)n Simple_repeat Simple_repeat 1 76 0 3 1173 702 194 199 6 chr15 77190509 77190690 -26304284 + B3 SINE B2 1 216 0 4 1173 344 258 9 85 chr15 77190794 77190900 -26304074 + MER44D DNA MER2_type 1 98 -607 4 1173 227 29 57 0 chr15 77190924 77190959 -26304015 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 4 1173 1299 73 23 0 chr15 77190959 77191136 -26303838 - B2_Mm2 SINE B2 -14 181 1 4 1173 21 0 0 0 chr15 77191136 77191157 -26303817 + AT_rich Low_complexity Low_complexity 1 21 0 4 1173 924 234 0 11 chr15 77191158 77191344 -26303630 - B3 SINE B2 -1 215 32 4 1173 1199 40 0 0 chr15 77191362 77191510 -26303464 - B1_Mus1 SINE Alu 0 148 1 4 1173 1456 42 11 5 chr15 77191514 77191704 -26303270 - B2_Mm2 SINE B2 -4 191 1 4 1173 324 258 0 22 chr15 77191704 77191795 -26303179 + MER54A LTR ERVL 30 118 -783 4 1173 582 128 0 0 chr15 77191879 77191973 -26303001 + (TCTCCC)n Simple_repeat Simple_repeat 1 94 0 4 1173 313 267 28 37 chr15 77192221 77192330 -26302644 + L1MEf LINE L1 1378 1485 -4715 4 1173 668 218 61 0 chr15 77192357 77192504 -26302470 + ID_B1 SINE B4 60 215 -9 4 1173 266 160 60 0 chr15 77192460 77192510 -26302464 + PB1D7 SINE Alu 65 117 -3 4 1173 613 217 83 14 chr15 77192566 77192711 -26302263 + B3 SINE B2 1 155 -61 4 1173 357 125 0 0 chr15 77192727 77192783 -26302191 + (GGGA)n Simple_repeat Simple_repeat 1 56 0 4 1173 399 202 32 11 chr15 77192926 77193021 -26301953 + PB1D10 SINE Alu 21 117 0 4 1173 189 107 0 0 chr15 77193066 77193094 -26301880 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1173 1018 184 30 15 chr15 77193111 77193310 -26301664 + B3 SINE B2 15 216 0 4 1173 204 396 15 22 chr15 77193761 77193898 -26301076 + L2c LINE L2 3252 3387 0 4 1173 300 91 0 0 chr15 77193904 77193948 -26301026 + (TGAA)n Simple_repeat Simple_repeat 4 47 0 4 1173 252 0 0 0 chr15 77194784 77194812 -26300162 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 1173 930 201 9 186 chr15 77194825 77195091 -26299883 - B4 SINE B4 0 292 71 4 1173 1114 65 0 0 chr15 77195091 77195229 -26299745 + B1_Mus1 SINE Alu 2 139 -9 4 1173 405 0 0 0 chr15 77195229 77195274 -26299700 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 4 1173 930 201 9 186 chr15 77195274 77195329 -26299645 - B4 SINE B4 -222 70 28 4 1173 664 197 7 0 chr15 77195537 77195674 -26299300 - MTD LTR MaLR -189 230 93 4 1173 231 125 0 0 chr15 77195674 77195714 -26299260 + (CCA)n Simple_repeat Simple_repeat 1 40 0 4 1173 410 245 18 16 chr15 77196148 77196271 -26298703 - Lx9 LINE L1 -203 5953 5803 4 1173 535 288 16 60 chr15 77196261 77196455 -26298519 + Lx9 LINE L1 5553 5744 -892 4 1173 197 214 0 23 chr15 77196770 77196813 -26298161 - L2 LINE L2 -3157 262 221 4 1173 530 212 80 0 chr15 77196854 77196967 -26298007 + B1F SINE Alu 20 141 -8 4 1173 600 53 0 0 chr15 77197002 77197078 -26297896 + (GA)n Simple_repeat Simple_repeat 1 76 0 4 1173 315 0 0 0 chr15 77197897 77197932 -26297042 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 4 1173 900 77 13 71 chr15 77197935 77198089 -26296885 - B1_Mus1 SINE Alu -2 146 2 4 1173 391 197 0 0 chr15 77198218 77198289 -26296685 + B3 SINE B2 145 215 -1 4 1173 679 135 20 101 chr15 77198296 77198444 -26296530 + B1_Mur3 SINE Alu 1 136 -13 4 1173 207 0 0 0 chr15 77198444 77198467 -26296507 + (CAAAC)n Simple_repeat Simple_repeat 1 23 0 4 1173 927 226 70 9 chr15 77199876 77200090 -26294884 - ORR1D2 LTR MaLR 0 370 144 4 1173 739 103 213 27 chr15 77200093 77200124 -26294850 - B2_Mm2 SINE B2 -2 193 161 4 1173 252 0 0 0 chr15 77200124 77200152 -26294822 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 4 1173 739 101 173 141 chr15 77200152 77200305 -26294669 - B2_Mm2 SINE B2 -30 163 1 4 1173 251 268 0 0 chr15 77200773 77200829 -26294145 - ORR1D2 LTR MaLR -229 138 83 4 146 3319 151 184 18 chr15 77200842 77201563 -26293411 + RMER21B LTR ERV1 1 841 -1 4 1174 3227 199 96 83 chr15 77201564 77202585 -26292389 + RodERV21-int LTR ERV1 5 1040 -3951 4 1174 882 90 105 0 chr15 77202585 77202718 -26292256 - B1_Mus2 SINE Alu 0 147 1 4 1174 3227 199 96 83 chr15 77202718 77202764 -26292210 + RodERV21-int LTR ERV1 1041 1085 -3906 4 1174 185 222 0 0 chr15 77203065 77203101 -26291873 + L4 LINE RTE 1836 1871 -158 4 1174 14110 188 39 37 chr15 77203101 77203159 -26291815 + RodERV21-int LTR ERV1 1988 2044 -2947 4 1174 1490 62 0 10 chr15 77203159 77203354 -26291620 - B2_Mm1t SINE B2 0 193 1 4 1174 14110 188 39 37 chr15 77203354 77203823 -26291151 + RodERV21-int LTR ERV1 2045 2506 -2485 4 1174 2192 131 312 6 chr15 77203823 77204291 -26290683 + RMER19C LTR ERVK 1 611 0 4 1174 14110 188 39 37 chr15 77204291 77206517 -26288457 + RodERV21-int LTR ERV1 2507 4759 -232 4 1174 3013 8 8 0 chr15 77206517 77206874 -26288100 - L1Md_A LINE L1 0 6582 6223 4 1174 14110 188 39 37 chr15 77206874 77206933 -26288041 + RodERV21-int LTR ERV1 4760 4807 -184 4 1174 444 244 7 64 chr15 77207111 77207251 -26287723 + RLTR6-int LTR ERV1 2203 2334 -5444 4 1174 1774 299 88 59 chr15 77207292 77208540 -26286434 + MuRRS4-int LTR ERV1 2929 4450 -3156 4 1174 383 274 8 17 chr15 77208697 77208816 -26286158 + RLTR4_MM-int LTR ERV1 5493 5610 -1991 4 1174 454 281 6 63 chr15 77209060 77209235 -26285739 + MURVY-int LTR ERV1 6986 7150 -302 4 1174 1386 199 193 46 chr15 77209455 77209844 -26285130 + RLTR41 LTR ERV1 1 446 0 4 1174 368 229 0 12 chr15 77209844 77209928 -26285046 + MuRRS4-int LTR ERV1 4804 4886 -105 4 1174 264 250 0 26 chr15 77209931 77210009 -26284965 + RMER4B LTR ERVK 378 453 -132 4 1174 3915 154 113 18 chr15 77210034 77210801 -26284173 + RMER21B LTR ERV1 1 840 -2 4 1174 2620 47 100 3 chr15 77210828 77211189 -26283785 + MTA_Mm LTR MaLR 1 396 0 4 1174 839 220 131 18 chr15 77212025 77212421 -26282553 + RLTR20A2 LTR ERVK 1 479 -99 4 1174 378 0 0 0 chr15 77212421 77212463 -26282511 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1174 830 228 211 8 chr15 77212463 77212534 -26282440 + RLTR20A2 LTR ERVK 447 568 -10 4 1174 1159 233 215 51 chr15 77212524 77212873 -26282101 + RMER17B LTR ERVK 534 958 0 4 1174 1422 284 17 36 chr15 77212874 77213152 -26281822 + RMER1A Other Other 45 450 -616 4 1174 405 0 0 0 chr15 77213152 77213197 -26281777 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1174 4198 189 41 25 chr15 77213197 77214168 -26280806 + RMER1A Other Other 152 1028 -2 4 1174 1312 151 18 0 chr15 77214253 77214471 -26280503 - URR1A DNA MER1_type -4 222 1 4 1174 2493 48 130 3 chr15 77214545 77214900 -26280074 + MTB LTR MaLR 1 400 0 4 1174 8250 27 0 0 chr15 77216186 77217501 -26277473 - L1Md_T LINE L1 0 6582 5268 4 1174 231 310 6 25 chr15 77220226 77220388 -26274586 + CT-rich Low_complexity Low_complexity 3 161 0 4 1174 1182 109 0 21 chr15 77220659 77220846 -26274128 - B2_Mm2 SINE B2 -11 184 2 4 1174 624 250 13 26 chr15 77220857 77221009 -26273965 - B3 SINE B2 -6 210 61 4 1174 305 289 157 69 chr15 77221852 77222157 -26272817 + MER31B LTR ERV1 1 332 -134 4 1174 729 65 0 0 chr15 77222374 77222466 -26272508 + B1_Mus2 SINE Alu 48 139 -8 4 1174 216 0 0 0 chr15 77222466 77222490 -26272484 + (CCAA)n Simple_repeat Simple_repeat 2 25 0 4 1174 672 326 26 9 chr15 77222525 77222743 -26272231 + B4A SINE B4 1 222 -70 4 1174 311 220 96 52 chr15 77222743 77222858 -26272116 + B2_Mm2 SINE B2 2 121 -74 4 1174 293 252 161 54 chr15 77222890 77223020 -26271954 - MLT1B LTR MaLR -246 144 1 4 1174 387 0 0 0 chr15 77223378 77223421 -26271553 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1174 441 0 0 0 chr15 77223421 77223469 -26271505 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 1174 201 290 14 28 chr15 77224243 77224314 -26270660 + CT-rich Low_complexity Low_complexity 2 71 0 4 1174 313 333 46 40 chr15 77224318 77224493 -26270481 + MLT1B LTR MaLR 215 390 0 4 1174 1066 165 80 5 chr15 77224654 77224855 -26270119 - B3 SINE B2 0 216 1 4 1174 729 85 45 127 chr15 77225298 77225432 -26269542 + B2_Mm2 SINE B2 24 146 -49 4 1174 1048 122 13 0 chr15 77225465 77225621 -26269353 + B2_Mm2 SINE B2 2 159 -36 4 1174 387 60 0 0 chr15 77225621 77225671 -26269303 + (CAAA)n Simple_repeat Simple_repeat 3 52 0 4 1174 315 0 0 0 chr15 77225696 77225731 -26269243 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 4 1174 517 230 39 23 chr15 77225768 77225897 -26269077 + B1_Mur3 SINE Alu 1 131 -18 4 1174 297 0 0 0 chr15 77226397 77226430 -26268544 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1174 1109 29 0 14 chr15 77226430 77226562 -26268412 - B1_Mm SINE Alu -8 139 9 4 1174 442 271 53 30 chr15 77226862 77226995 -26267979 - RMER10B LTR ERVL -68 330 195 4 1174 423 256 14 101 chr15 77227227 77227366 -26267608 + MT2B LTR ERVL 138 264 -337 4 1174 1032 73 0 7 chr15 77227260 77227391 -26267583 + B1_Mus2 SINE Alu 7 137 -10 4 1174 247 0 25 50 chr15 77227391 77227431 -26267543 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1174 1743 157 36 3 chr15 77227436 77227737 -26267237 - ORR1C1 LTR MaLR -60 318 3 4 1174 198 250 23 0 chr15 77227822 77227866 -26267108 - MIRc SINE MIR -192 76 32 4 1174 395 292 17 0 chr15 77228594 77228714 -26266260 - ID_B1 SINE B4 -17 207 86 4 1174 974 244 44 105 chr15 77229256 77229600 -26265374 - MT2B LTR ERVL 0 601 279 4 1174 2180 23 0 0 chr15 77229837 77230095 -26264879 + L1Md_F2 LINE L1 5328 5585 -298 4 1174 8367 43 0 9 chr15 77230096 77231101 -26263873 + L1Md_F2 LINE L1 5587 6582 0 4 1174 945 83 0 0 chr15 77231470 77231602 -26263372 + (TTTC)n Simple_repeat Simple_repeat 2 133 0 4 1174 1184 122 29 0 chr15 77231603 77231775 -26263199 - B2_Mm2 SINE B2 -16 179 3 4 1174 187 276 93 31 chr15 77231972 77232069 -26262905 + MIRm SINE MIR 115 217 -59 4 1174 762 235 16 16 chr15 77232838 77233020 -26261954 + RMER5 LTR ERV1 38 219 -315 4 1174 1201 269 31 9 chr15 77233516 77233842 -26261132 + RMER5 LTR ERV1 202 534 0 4 1174 616 288 12 18 chr15 77235715 77235878 -26259096 + B4 SINE B4 3 164 -128 4 1174 1319 131 102 11 chr15 77236519 77236798 -26258176 - MTB_Mm LTR MaLR 0 396 1 4 1174 243 0 0 0 chr15 77237184 77237211 -26257763 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1174 2486 165 59 20 chr15 77239719 77240226 -26254748 + RLTR11A2 LTR ERVK 1 527 0 4 1174 1738 21 0 0 chr15 77242319 77242511 -26252463 + B2_Mm1a SINE B2 1 192 -1 4 1174 526 242 3 3 chr15 77242627 77242743 -26252231 + B3A SINE B2 58 173 -43 4 1174 360 0 0 0 chr15 77242755 77242795 -26252179 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1174 204 40 0 0 chr15 77244354 77244379 -26250595 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 1174 255 311 72 29 chr15 77245413 77245552 -26249422 + LTR16E2 LTR ERVL 322 466 -102 5 1174 553 288 7 14 chr15 77246839 77246980 -26247994 - RSINE1 SINE B4 -22 143 4 5 1174 423 0 0 0 chr15 77247395 77247442 -26247532 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1174 297 0 0 0 chr15 77249951 77249984 -26244990 + (TC)n Simple_repeat Simple_repeat 2 34 0 5 1174 242 29 29 0 chr15 77249984 77250018 -26244956 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 1174 1125 83 0 0 chr15 77250018 77250163 -26244811 - B2_Mm2 SINE B2 -48 147 3 5 1174 5342 201 73 83 chr15 77250512 77250961 -26244013 - RLTR21 LTR ERVK -136 1436 1005 5 1174 1136 88 0 0 chr15 77250961 77251098 -26243876 + B1_Mus2 SINE Alu 2 138 -9 5 1174 5342 191 79 81 chr15 77251098 77251762 -26243212 - RLTR21 LTR ERVK -568 1004 407 5 1174 1331 106 0 16 chr15 77251762 77251953 -26243021 - B2_Mm2 SINE B2 -7 188 1 5 1174 5342 191 79 81 chr15 77251953 77252340 -26242634 - RLTR21 LTR ERVK -1166 406 2 5 1174 259 302 61 81 chr15 77252579 77252839 -26242135 - RLTR41 LTR ERV1 -27 480 194 5 1174 243 200 110 61 chr15 77254674 77254756 -26240218 + B3A SINE B2 36 121 -74 5 1174 240 240 152 71 chr15 77254789 77254901 -26240073 - MLT1B LTR MaLR -246 144 24 5 1174 1212 94 55 11 chr15 77255285 77255438 -26239536 + B2_Mm1t SINE B2 1 154 -39 5 1174 189 0 0 0 chr15 77255438 77255459 -26239515 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1174 258 32 0 0 chr15 77255459 77255489 -26239485 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 1174 1212 94 55 11 chr15 77255489 77255516 -26239458 + B2_Mm1t SINE B2 155 189 -4 5 1174 292 237 52 13 chr15 77255530 77255607 -26239367 - MIRb SINE MIR -10 258 179 5 1174 302 329 121 49 chr15 77256136 77256538 -26238436 + MLT1B LTR MaLR 1 390 0 5 1174 938 196 80 5 chr15 77256700 77256900 -26238074 - B3 SINE B2 -1 215 1 5 1174 503 204 19 0 chr15 77257384 77257487 -26237487 + B1_Mur4 SINE Alu 12 116 -34 5 1174 1761 152 26 109 chr15 77257522 77257899 -26237075 + ORR1B1 LTR MaLR 41 386 -8 5 1174 2021 162 33 6 chr15 77258581 77258947 -26236027 - ORR1C1 LTR MaLR 0 378 3 5 1174 232 315 45 0 chr15 77259366 77259477 -26235497 - L1M5 LINE L1 -403 5721 5606 5 1174 229 317 116 15 chr15 77259775 77259922 -26235052 - MIRb SINE MIR -89 173 20 5 1174 238 185 148 0 chr15 77260422 77260476 -26234498 + B1_Mur4 SINE Alu 10 71 -79 5 1174 333 0 0 0 chr15 77260600 77260637 -26234337 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1174 663 280 159 0 chr15 77260665 77260847 -26234127 + B4A SINE B4 1 211 -81 5 1174 4335 20 10 2 chr15 77260847 77261336 -26233638 - MT2_Mm LTR ERVL 0 493 1 5 1174 305 0 0 0 chr15 77261336 77261374 -26233600 - MERVL-int LTR ERVL 0 5485 5448 5 1174 364 125 26 53 chr15 77261374 77261450 -26233524 - ORR1A3-int LTR MaLR -1323 640 567 5 1174 45697 18 8 0 chr15 77261450 77266779 -26228195 - MERVL-int LTR ERVL -114 5371 1 5 1174 4322 22 10 2 chr15 77266779 77267268 -26227706 - MT2_Mm LTR ERVL 0 493 1 5 1174 314 250 22 56 chr15 77267268 77267357 -26227617 + B4A SINE B4 207 292 0 5 1174 314 262 7 0 chr15 77267360 77267509 -26227465 + (CA)n Simple_repeat Simple_repeat 1 150 0 5 1174 305 192 19 0 chr15 77268196 77268237 -26226737 - ID_B1 SINE B4 -20 204 163 5 1174 2020 98 6 78 chr15 77268237 77268506 -26226468 + ORR1A2 LTR MaLR 1 258 -69 5 1174 1260 41 0 0 chr15 77268506 77268653 -26226321 + B1_Mus2 SINE Alu 1 147 0 5 1174 5009 130 17 5 chr15 77268653 77269496 -26225478 + ORR1A2-int LTR MaLR 259 1104 -688 5 1174 3513 78 39 0 chr15 77269797 77270261 -26224713 + LTRIS_Mm LTR ERV1 1 482 0 5 1174 3368 59 84 5 chr15 77270433 77270873 -26224101 - MT2C_Mm LTR ERVL 0 475 1 5 1174 1493 283 55 13 chr15 77270998 77271474 -26223500 + RMER5 LTR ERV1 38 533 -1 5 1174 440 196 91 43 chr15 77271894 77271905 -26223069 + RLTR42-int LTR ERVK 1946 1956 -3566 5 1174 1046 59 243 0 chr15 77271905 77272057 -26222917 - B2_Mm2 SINE B2 -6 189 1 5 1174 440 196 91 43 chr15 77272057 77272232 -26222742 + RLTR42-int LTR ERVK 1957 2140 -3382 5 1174 330 242 197 55 chr15 77272210 77272520 -26222454 + RLTR42-int LTR ERVK 2329 2682 -3455 5 1174 344 165 10 99 chr15 77272744 77272845 -26222129 + RLTR42-int LTR ERVK 2946 3037 -3100 5 1174 3675 103 7 22 chr15 77273342 77273927 -26221047 - RLTR19-int LTR ERVK -4133 2004 1429 5 1174 369 340 0 0 chr15 77273975 77274122 -26220852 + (CCA)n Simple_repeat Simple_repeat 1 147 0 5 1174 3033 118 38 30 chr15 77276528 77276999 -26217975 - MT2C_Mm LTR ERVL 0 475 1 5 1174 758 162 168 32 chr15 77277578 77277763 -26217211 + RMER17C LTR ERVK 201 410 0 5 1174 979 139 6 0 chr15 77278339 77278504 -26216470 + RLTR14 LTR ERV1 3 168 -214 5 1174 866 85 0 8 chr15 77278499 77278630 -26216344 - B2_Mm2 SINE B2 0 195 66 5 1174 628 75 0 11 chr15 77278630 77278724 -26216250 - RMER16 LTR ERVK 0 533 441 5 1174 479 250 50 31 chr15 77278896 77279057 -26215917 - MMVL30-int LTR ERV1 -2 7776 7613 5 1174 3870 246 36 35 chr15 77279043 77281082 -26213892 - MMVL30-int LTR ERV1 -2386 5392 1613 5 1174 569 86 12 0 chr15 77281095 77281176 -26213798 - L1_Mus2 LINE L1 -6 6560 6479 5 1174 30973 103 10 45 chr15 77281175 77287213 -26207761 - L1_Mus2 LINE L1 -228 6338 509 5 1174 482 222 21 49 chr15 77287213 77287355 -26207619 - MMVL30-int LTR ERV1 -2068 1630 1493 5 1174 593 324 24 27 chr15 77287339 77287669 -26207305 - MuRRS4-int LTR ERV1 -3321 1742 1414 5 1174 260 257 81 120 chr15 77287732 77288015 -26206959 + RMER16-int LTR ERVK 47 318 -2996 5 1174 16394 181 82 62 chr15 77288146 77290630 -26204344 + RMER16-int LTR ERVK 255 3567 -3839 5 1174 1139 75 0 14 chr15 77290630 77290767 -26204207 + B1_Mm SINE Alu 2 138 -9 5 1174 297 0 0 0 chr15 77290767 77290800 -26204174 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 1174 16394 102 48 27 chr15 77290810 77292488 -26202486 + RMER16-int LTR ERVK 2489 4182 -1224 5 1174 320 226 50 70 chr15 77292501 77292601 -26202373 + ETnERV2-int LTR ERVK 6108 6205 -1201 5 1174 1178 75 0 0 chr15 77292666 77292813 -26202161 - B1_Mus1 SINE Alu 0 148 2 5 1174 570 244 178 72 chr15 77293255 77293586 -26201388 + RLTR9A LTR ERVK 3 368 0 5 1174 2959 61 199 12 chr15 77293817 77294248 -26200726 - RLTR1B LTR ERV1 0 512 1 5 1174 229 296 81 20 chr15 77294643 77294791 -26200183 + L1MB3 LINE L1 5573 5729 -454 5 1174 254 255 155 18 chr15 77294808 77294976 -26199998 + L1MB3 LINE L1 5806 5996 -187 5 1174 3519 277 80 61 chr15 77295148 77296266 -26198708 - Lx5 LINE L1 -3 7047 5905 5 1174 1011 133 21 52 chr15 77296266 77296457 -26198517 - B2_Mm2 SINE B2 -9 186 2 5 1174 3519 249 54 55 chr15 77296457 77296727 -26198247 - Lx5 LINE L1 -1146 5904 5651 5 1174 840 216 18 59 chr15 77296758 77296979 -26197995 + B3 SINE B2 1 212 -4 5 1174 200 35 35 0 chr15 77297141 77297170 -26197804 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 5 1174 734 304 34 30 chr15 77297543 77297808 -26197166 - RMER15 LTR ERVL 0 575 310 5 1174 548 117 188 0 chr15 77298912 77299040 -26195934 + ORR1B1 LTR MaLR 1 152 -242 5 1174 688 262 73 21 chr15 77299038 77299272 -26195702 + RMER12 LTR ERVK 973 1218 -104 5 1174 511 259 7 41 chr15 77299340 77299485 -26195489 + RLTR12B LTR ERVK 121 260 -268 5 1174 4292 153 53 44 chr15 77299487 77300369 -26194605 + RMER19B LTR ERVK 1 890 -12 5 1174 342 282 13 0 chr15 77300395 77300473 -26194501 - B4A SINE B4 -190 102 24 5 1174 401 217 71 168 chr15 77300516 77300671 -26194303 - B1_Mur1 SINE Alu 0 149 10 5 1174 222 333 36 18 chr15 77300686 77300796 -26194178 - PB1D10 SINE Alu -5 112 1 5 1174 288 0 0 0 chr15 77300878 77300910 -26194064 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 1174 190 0 32 32 chr15 77300953 77300984 -26193990 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1174 751 239 22 22 chr15 77300984 77301164 -26193810 - B3 SINE B2 -33 183 4 5 1174 182 174 22 0 chr15 77301473 77301519 -26193455 + CT-rich Low_complexity Low_complexity 2 48 0 5 1174 1956 153 32 5 chr15 77301905 77302510 -26192464 - RLTR33 LTR ERVK -15 663 1 5 1174 254 250 258 11 chr15 77302626 77302808 -26192166 + L1MEc LINE L1 193 419 -5981 5 1174 1568 175 19 40 chr15 77302982 77303352 -26191622 - RMER10A LTR ERVL 0 442 81 5 1174 935 313 41 31 chr15 77303517 77304005 -26190969 + RLTR6-int LTR ERV1 7158 7650 -128 5 1174 4216 128 65 18 chr15 77304405 77305259 -26189715 - RLTR13D3 LTR ERVK 0 1114 1 5 1174 338 49 213 0 chr15 77305724 77305785 -26189189 - MT2B LTR ERVL -527 74 1 5 1174 364 169 289 0 chr15 77306037 77306120 -26188854 - RLTR25B LTR ERVK 0 1028 922 5 1174 266 286 62 9 chr15 77306124 77306237 -26188737 - RLTR25B LTR ERVK -252 776 658 5 1174 778 172 7 29 chr15 77306432 77306570 -26188404 + B1_Mus2 SINE Alu 1 135 -12 5 1174 279 79 0 0 chr15 77306573 77306611 -26188363 + (CAAG)n Simple_repeat Simple_repeat 2 39 0 5 1174 373 215 301 38 chr15 77306618 77306832 -26188142 - RLTR40 LTR ERVK -83 734 465 5 1174 754 189 73 6 chr15 77306834 77306999 -26187975 - ORR1C2 LTR MaLR 0 384 209 5 1174 279 71 0 0 chr15 77307064 77307106 -26187868 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1174 1419 168 5 112 chr15 77308598 77309018 -26185956 - RMER17C LTR ERVK 0 410 36 5 1174 3218 71 19 15 chr15 77309018 77309441 -26185533 - MT2C_Mm LTR ERVL 0 475 50 5 1174 3457 38 2 0 chr15 77309441 77309836 -26185138 - MTA_Mm LTR MaLR 0 396 1 5 1174 3218 71 19 15 chr15 77309836 77309885 -26185089 - MT2C_Mm LTR ERVL -426 49 1 5 1174 242 125 0 0 chr15 77309885 77309925 -26185049 - RMER17C LTR ERVK -370 40 1 5 1174 631 91 91 0 chr15 77310712 77310822 -26184152 + B2_Mm2 SINE B2 76 195 0 5 1174 307 302 14 72 chr15 77311864 77312003 -26182971 + ORR1D2 LTR MaLR 11 141 -229 5 1174 468 264 50 7 chr15 77312013 77312154 -26182820 + B1F1 SINE Alu 2 148 -1 5 1174 297 0 0 0 chr15 77312354 77312387 -26182587 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1174 1666 129 31 37 chr15 77312414 77312457 -26182517 - ORR1A4 LTR MaLR -8 321 287 5 1174 1573 72 0 0 chr15 77312457 77312650 -26182324 - B2_Mm1a SINE B2 0 193 1 5 1174 1666 129 31 37 chr15 77312650 77312929 -26182045 - ORR1A4 LTR MaLR -43 286 1 5 1174 1187 310 59 50 chr15 77312984 77313728 -26181246 + ORR1D-int LTR MaLR 60 810 -560 5 1174 2997 216 24 25 chr15 77314330 77315221 -26179753 - L1_Mur2 LINE L1 -4413 1464 575 5 1174 197 231 21 23 chr15 77315610 77315699 -26179275 + MIR SINE MIR 66 154 -54 5 1174 3177 56 8 2 chr15 77317725 77318119 -26176855 - MTA_Mm LTR MaLR 0 396 1 5 1174 304 211 56 0 chr15 77320457 77320528 -26174446 - L1MC3 LINE L1 -1855 5930 5856 5 1174 25 0 0 0 chr15 77321210 77321235 -26173739 + AT_rich Low_complexity Low_complexity 1 25 0 5 1174 443 200 46 39 chr15 77322903 77323033 -26171941 - RLTR25B LTR ERVK 0 1028 898 6 1174 342 265 12 0 chr15 77323171 77323254 -26171720 - MT2B LTR ERVL -316 285 202 6 1174 1845 214 88 55 chr15 77323227 77323794 -26171180 - RLTR25B LTR ERVK -431 597 12 6 1174 273 234 63 25 chr15 77325325 77325404 -26169570 + ID4 SINE ID 2 83 0 6 1174 888 79 150 0 chr15 77326034 77326161 -26168813 + B1_Mm SINE Alu 2 147 0 6 1174 228 67 0 0 chr15 77326161 77326191 -26168783 + (A)n Simple_repeat Simple_repeat 1 30 0 6 1174 2704 166 31 10 chr15 77326770 77327281 -26167693 - RLTR28 LTR ERVL 0 524 3 6 1174 282 259 93 0 chr15 77328639 77328747 -26166227 + B3 SINE B2 96 213 -3 6 146 38933 15 3 6 chr15 77328917 77335313 -26159661 - L1Md_A LINE L1 0 6582 207 6 1175 620 272 73 85 chr15 77335352 77335518 -26159456 + RLTR40 LTR ERVK 300 462 -355 6 1175 1478 211 65 24 chr15 77335518 77335686 -26159288 + ORR1C2 LTR MaLR 1 171 -213 6 1175 594 0 0 0 chr15 77335686 77335752 -26159222 + (TC)n Simple_repeat Simple_repeat 1 66 0 6 1175 1478 211 65 24 chr15 77335752 77335952 -26159022 + ORR1C2 LTR MaLR 172 383 -1 6 1175 620 272 73 85 chr15 77335952 77336114 -26158860 + RLTR40 LTR ERVK 463 624 -193 6 1175 626 114 0 39 chr15 77336148 77336168 -26158806 + polypyrimidine Low_complexity Low_complexity 105 123 0 6 1175 321 26 0 0 chr15 77336168 77336206 -26158768 + (TCCCC)n Simple_repeat Simple_repeat 5 42 0 6 1175 626 114 0 39 chr15 77336206 77336313 -26158661 + CT-rich Low_complexity Low_complexity 1 104 0 6 1175 493 218 9 38 chr15 77336314 77336419 -26158555 - B1_Mur4 SINE Alu -6 144 43 6 1175 373 127 0 0 chr15 77336495 77336550 -26158424 - PB1D9 SINE Alu -65 55 1 6 1175 566 276 45 0 chr15 77336849 77336983 -26157991 + RSINE1 SINE B4 13 152 -13 6 1175 1203 223 30 17 chr15 77337028 77337324 -26157650 + RCHARR1 DNA MER1_type 523 822 -152 6 1175 1741 176 115 16 chr15 77337323 77337688 -26157286 + MTD LTR MaLR 6 406 -13 6 1175 332 221 86 9 chr15 77337715 77337820 -26157154 + RCHARR1 DNA MER1_type 820 932 -42 6 1175 1018 222 19 0 chr15 77337825 77338032 -26156942 + B3 SINE B2 2 212 -4 6 1175 718 157 27 48 chr15 77338142 77338289 -26156685 - B1F2 SINE Alu 0 149 6 6 1175 1788 162 37 34 chr15 77339820 77340229 -26154745 - RMER17C LTR ERVK 0 410 1 6 1175 465 323 71 0 chr15 77341567 77341722 -26153252 + ORR1E LTR MaLR 4 169 -190 6 1175 515 216 0 3 chr15 77341737 77341843 -26153131 + B1_Mur1 SINE Alu 36 139 -10 6 1175 423 0 0 0 chr15 77342027 77342074 -26152900 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1175 2051 118 16 6 chr15 77342094 77342409 -26152565 - ORR1A3 LTR MaLR -8 318 1 6 1175 391 191 0 0 chr15 77342458 77342535 -26152439 + ORR1E-int LTR MaLR 61 151 -1429 6 1175 227 342 109 24 chr15 77342817 77342982 -26151992 - MLT1C LTR MaLR -287 180 2 6 1175 3074 198 28 27 chr15 77342989 77343865 -26151109 - L1_Mur2 LINE L1 -4423 1454 579 6 1175 225 339 89 24 chr15 77345944 77346113 -26148861 - MER31B LTR ERV1 -76 390 211 6 1175 262 200 70 14 chr15 77348575 77348646 -26146328 - L1MC3 LINE L1 -1855 5930 5856 6 1175 185 310 68 11 chr15 77349274 77349362 -26145612 + L3 LINE CR1 3314 3406 -1083 6 1175 342 0 0 0 chr15 77350847 77350885 -26144089 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1175 423 0 0 0 chr15 77350885 77350931 -26144043 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1175 2141 194 56 46 chr15 77351253 77351754 -26143220 + RMER20A LTR ERVK 11 516 0 6 1175 1617 222 60 74 chr15 77352086 77352616 -26142358 + RLTR11A LTR ERVK 6 528 0 6 1175 287 288 121 71 chr15 77354805 77355040 -26139934 - MLT1B LTR MaLR -114 334 114 6 1175 456 248 41 0 chr15 77357139 77357260 -26137714 - B3 SINE B2 0 216 91 6 1175 367 266 164 75 chr15 77358073 77358378 -26136596 + MER31B LTR ERV1 1 332 -134 6 1175 706 309 26 9 chr15 77358579 77358797 -26136177 + B4A SINE B4 1 222 -70 6 1175 276 286 70 26 chr15 77358797 77358912 -26136062 + B3A SINE B2 2 121 -74 6 1175 313 225 173 55 chr15 77358947 77359074 -26135900 - MLT1B LTR MaLR -248 142 1 6 1175 1089 63 0 0 chr15 77359406 77359548 -26135426 + (CA)n Simple_repeat Simple_repeat 1 142 0 6 1175 228 276 19 164 chr15 77359560 77359664 -26135310 - MIRb SINE MIR 0 268 180 6 1175 826 209 96 199 chr15 77359679 77360116 -26134858 + RLTR11B LTR ERVK 4 392 -61 6 1175 234 0 0 0 chr15 77360116 77360142 -26134832 + (CAAT)n Simple_repeat Simple_repeat 1 26 0 6 1175 826 209 96 199 chr15 77360142 77360181 -26134793 + RLTR11B LTR ERVK 393 431 -22 6 1175 1722 209 18 3 chr15 77364236 77364572 -26130402 + RLTR14 LTR ERV1 7 347 -35 6 1175 2032 148 9 3 chr15 77364572 77364897 -26130077 + ORR1A4 LTR MaLR 1 327 -2 6 1175 4372 77 33 2 chr15 77364910 77365479 -26129495 + LTRIS_Mus LTR ERV1 1 587 0 6 1175 10075 147 62 59 chr15 77365479 77367430 -26127544 + ORR1A4-int LTR MaLR 8 1963 0 6 1175 1970 141 16 0 chr15 77367430 77367742 -26127232 + ORR1A4 LTR MaLR 1 317 -12 6 1175 5526 257 91 83 chr15 77367801 77370320 -26124654 + RLTR14-int LTR ERV1 69 2607 -2710 6 1175 779 88 13 42 chr15 77370322 77370563 -26124411 + (TAGA)n Simple_repeat Simple_repeat 1 233 0 6 1175 360 125 0 59 chr15 77370576 77370644 -26124330 + RLTR14-int LTR ERV1 2645 2708 -2609 6 1175 295 291 131 13 chr15 77372220 77372457 -26122517 + L1MB3 LINE L1 5823 6087 -96 6 1175 3094 291 59 51 chr15 77372590 77373945 -26121029 - Lx5 LINE L1 -36 7014 5649 6 1175 802 224 17 91 chr15 77373991 77374222 -26120752 + B3 SINE B2 1 214 -2 6 1175 990 110 14 0 chr15 77374450 77374596 -26120378 + B2_Mm1t SINE B2 5 152 -41 6 1175 244 149 336 78 chr15 77374614 77374657 -26120317 + B2_Mm2 SINE B2 47 89 -106 6 1175 3979 131 22 59 chr15 77374657 77375437 -26119537 + RMER17A LTR ERVK 1 751 0 6 1175 244 149 336 78 chr15 77375437 77375509 -26119465 + B2_Mm2 SINE B2 90 192 -3 6 1175 448 302 35 76 chr15 77375931 77376128 -26118846 + RMER13A LTR ERVK 497 685 -175 6 1175 458 285 75 56 chr15 77376228 77376388 -26118586 + RMER13A LTR ERVK 698 860 0 6 1175 382 319 160 76 chr15 77376414 77376662 -26118312 - RMER12 LTR ERVK -396 1008 770 6 1175 1753 10 0 0 chr15 77376662 77376854 -26118120 - B2_Mm1a SINE B2 -1 192 1 6 1175 1599 250 79 36 chr15 77376854 77377351 -26117623 - RMER12 LTR ERVK -635 769 59 6 1175 199 0 65 0 chr15 77377351 77377382 -26117592 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 6 1175 1599 172 33 7 chr15 77377382 77377445 -26117529 - RMER12 LTR ERVK -1258 64 2 6 1175 995 182 2 19 chr15 77377587 77377799 -26117175 + RLTR19-int LTR ERVK 3024 3193 -2944 6 1175 2381 226 34 39 chr15 77377815 77378405 -26116569 + RLTR19-int LTR ERVK 3795 4381 -1756 6 1175 24 0 0 0 chr15 77378591 77378615 -26116359 + AT_rich Low_complexity Low_complexity 1 24 0 6 1175 22 35 0 0 chr15 77378976 77379005 -26115969 + AT_rich Low_complexity Low_complexity 1 29 0 6 1175 681 234 28 0 chr15 77379068 77379213 -26115761 - B3 SINE B2 -67 149 1 6 1175 377 274 35 9 chr15 77379218 77379332 -26115642 - PB1D10 SINE Alu 0 117 1 6 1175 29 28 0 0 chr15 77379416 77379452 -26115522 + AT_rich Low_complexity Low_complexity 1 36 0 6 1175 427 301 0 28 chr15 77379454 77379560 -26115414 - RSINE1 SINE B4 -1 164 62 6 1175 228 250 81 57 chr15 77379560 77379683 -26115291 + L1MEc LINE L1 789 914 -5486 6 1175 430 271 45 66 chr15 77379717 77379992 -26114982 + RMER12B LTR ERVK 402 653 -1195 6 1175 36047 34 0 0 chr15 77379992 77385354 -26109620 + L1Md_T LINE L1 132 5589 -297 6 1175 9048 7 3 0 chr15 77385354 77386343 -26108631 + L1Md_T LINE L1 5590 6581 -4 6 1175 368 288 97 108 chr15 77386386 77386756 -26108218 + RMER12B LTR ERVK 868 1233 -171 6 1175 288 203 44 19 chr15 77386756 77386962 -26108012 + (TG)n Simple_repeat Simple_repeat 1 211 0 6 1175 2302 154 16 35 chr15 77387294 77387745 -26107229 - RMER10A LTR ERVL 0 442 1 6 1175 376 264 67 7 chr15 77387833 77387982 -26106992 + L1MEc LINE L1 727 884 -5516 6 1175 278 200 18 0 chr15 77388006 77388061 -26106913 + B1_Mur4 SINE Alu 5 60 -90 6 1175 265 198 69 59 chr15 77388129 77388231 -26106743 + RLTR25B LTR ERVK 397 499 -529 6 1175 589 100 78 29 chr15 77388173 77388276 -26106698 + B1_Mur4 SINE Alu 43 150 0 6 1175 21 0 0 0 chr15 77388299 77388320 -26106654 + AT_rich Low_complexity Low_complexity 1 21 0 6 1175 644 245 20 33 chr15 77389007 77389159 -26105815 + B3A SINE B2 1 150 -48 6 1175 914 146 129 0 chr15 77389980 77390151 -26104823 + B3 SINE B2 9 201 -15 6 1175 186 43 0 0 chr15 77390152 77390175 -26104799 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 6 1175 534 16 0 0 chr15 77390203 77390266 -26104708 + (TC)n Simple_repeat Simple_repeat 2 64 0 6 1175 297 0 0 0 chr15 77390266 77390298 -26104676 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1175 457 239 112 0 chr15 77390304 77390438 -26104536 - B3A SINE B2 -43 155 7 6 1175 555 223 61 8 chr15 77390839 77390970 -26104004 + B1_Mur1 SINE Alu 5 142 -7 6 1175 292 269 0 0 chr15 77390970 77391048 -26103926 + GA-rich Low_complexity Low_complexity 1 78 0 6 1175 248 281 134 10 chr15 77391055 77391152 -26103822 + PB1D9 SINE Alu 5 113 -7 6 1175 231 290 97 0 chr15 77391196 77391289 -26103685 + ID_B1 SINE B4 123 224 0 6 1175 644 271 45 6 chr15 77391324 77391396 -26103578 + B4A SINE B4 13 91 -201 6 1175 247 288 85 59 chr15 77391396 77391514 -26103460 + B1F2 SINE Alu 3 123 -26 6 1175 447 155 0 0 chr15 77391517 77391601 -26103373 + (CA)n Simple_repeat Simple_repeat 1 84 0 6 1175 371 237 82 0 chr15 77391984 77392081 -26102893 - B3 SINE B2 -108 108 4 6 1175 309 234 26 13 chr15 77392719 77392797 -26102177 - ID SINE ID -145 79 1 6 1175 493 264 27 12 chr15 77392858 77392996 -26101978 + ID_B1 SINE B4 103 244 -48 6 1175 189 0 0 0 chr15 77393086 77393107 -26101867 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 6 1175 658 182 65 7 chr15 77393107 77393245 -26101729 - B1_Mur4 SINE Alu -4 146 1 6 1175 274 336 54 18 chr15 77393296 77393408 -26101566 - B4A SINE B4 -153 139 24 6 1175 249 33 0 0 chr15 77393415 77393445 -26101529 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6 1175 269 277 15 0 chr15 77393449 77393514 -26101460 - ID_B1 SINE B4 -17 207 142 6 1175 613 290 79 19 chr15 77393528 77393742 -26101232 + B4A SINE B4 56 282 -10 6 1175 383 308 155 16 chr15 77393873 77394232 -26100742 + MLT1E3 LTR MaLR 124 553 -101 6 1175 219 239 43 0 chr15 77394419 77394465 -26100509 - B4 SINE B4 -242 50 3 6 1175 481 171 0 47 chr15 77394471 77394593 -26100381 - B1_Mur1 SINE Alu -1 148 8 6 1175 351 0 0 0 chr15 77394606 77394645 -26100329 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1175 782 199 6 56 chr15 77394647 77394807 -26100167 - B3A SINE B2 -46 152 1 6 1175 395 272 29 10 chr15 77394825 77394929 -26100045 - PB1D10 SINE Alu -9 108 3 7 1175 311 311 28 9 chr15 77394838 77394945 -26100029 - ID_B1 SINE B4 -48 176 68 7 1175 616 226 136 51 chr15 77395422 77395599 -26099375 - MTEb LTR MaLR -161 218 27 7 1175 784 279 16 56 chr15 77395599 77395903 -26099071 + B4A SINE B4 1 292 0 7 1175 234 303 0 0 chr15 77395904 77395970 -26099004 + (CA)n Simple_repeat Simple_repeat 2 67 0 7 1175 8299 48 0 0 chr15 77396487 77397466 -26097508 - L1_Mus1 LINE L1 0 6567 5589 7 1175 1253 195 4 8 chr15 77397479 77397717 -26097257 - RLTR19C LTR ERVK -269 237 1 7 1175 373 221 125 0 chr15 77397983 77398066 -26096908 + PB1D10 SINE Alu 10 101 -16 7 1175 432 0 0 0 chr15 77398066 77398114 -26096860 + (GA)n Simple_repeat Simple_repeat 1 48 0 7 1175 402 46 46 0 chr15 77398114 77398179 -26096795 + (GGA)n Simple_repeat Simple_repeat 3 70 0 7 1175 667 201 13 53 chr15 77398298 77398450 -26096524 + B1F2 SINE Alu 3 148 -1 7 1175 1175 181 0 14 chr15 77398536 77398749 -26096225 - B3 SINE B2 -5 211 2 7 1175 368 196 46 9 chr15 77398754 77398862 -26096112 - RCHARR1 DNA MER1_type -42 932 821 7 1175 5023 133 17 63 chr15 77398866 77399547 -26095427 - Lx LINE L1 0 6654 6004 7 1175 1133 72 0 0 chr15 77399547 77399686 -26095288 - B1_Mus1 SINE Alu -9 139 1 7 1175 5023 133 17 63 chr15 77399686 77399887 -26095087 - Lx LINE L1 -651 6003 5813 7 1175 2384 112 68 28 chr15 77399888 77400283 -26094691 + IAPLTR2a LTR ERVK 1 411 0 7 1175 467 126 47 72 chr15 77400285 77400443 -26094531 + IAPEz-int LTR ERVK 3 123 -6358 7 1175 255 244 0 0 chr15 77400443 77400488 -26094486 + RLTR27 LTR ERVK 231 275 -34 7 1175 3974 53 2 18 chr15 77400489 77400991 -26093983 + IAPEz-int LTR ERVK 169 662 -5819 7 1175 2193 90 0 0 chr15 77400991 77401269 -26093705 + IAPEz-int LTR ERVK 1359 1636 -4845 7 1175 6268 35 3 19 chr15 77401268 77402024 -26092950 + IAPEz-int LTR ERVK 5736 6479 -2 7 1175 2345 115 68 28 chr15 77402026 77402421 -26092553 + IAPLTR2a LTR ERVK 1 411 0 7 1175 25214 158 18 14 chr15 77402421 77402957 -26092017 - Lx LINE L1 -66 5817 5293 7 1175 1186 61 0 7 chr15 77402957 77403106 -26091868 - B1_Mus1 SINE Alu 0 148 1 7 1175 25214 149 16 12 chr15 77403106 77407622 -26087352 - Lx LINE L1 -591 5292 748 7 1175 423 0 0 0 chr15 77407626 77407673 -26087301 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1175 557 268 0 0 chr15 77407673 77407785 -26087189 - RSINE1 SINE B4 -41 124 13 7 1175 323 153 0 63 chr15 77408084 77408147 -26086827 + PB1D9 SINE Alu 1 59 -61 7 1175 230 174 13 104 chr15 77408169 77408246 -26086728 + RLTR25B LTR ERVK 427 496 -532 7 1175 599 182 9 35 chr15 77408186 77408300 -26086674 + B1_Mur3 SINE Alu 39 149 0 7 1175 276 100 0 0 chr15 77408300 77408340 -26086634 + (GAAA)n Simple_repeat Simple_repeat 4 43 0 7 1175 480 62 0 0 chr15 77408341 77408405 -26086569 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 7 1175 715 237 196 72 chr15 77408414 77408652 -26086322 - RLTR40 LTR ERVK -64 753 463 7 1175 1448 191 95 20 chr15 77408652 77408837 -26086137 - ORR1D1 LTR MaLR -1 373 165 7 1175 423 0 0 0 chr15 77408837 77408884 -26086090 + (GA)n Simple_repeat Simple_repeat 2 48 0 7 1175 1448 191 95 20 chr15 77408884 77409045 -26085929 - ORR1D1 LTR MaLR -210 164 2 7 1175 715 237 196 72 chr15 77409045 77409210 -26085764 - RLTR40 LTR ERVK -355 462 300 7 1175 236 253 100 12 chr15 77409377 77409457 -26085517 - B3 SINE B2 0 216 130 7 1175 2372 14 22 0 chr15 77409548 77409823 -26085151 - L1Md_F3 LINE L1 -14 6570 6290 7 1175 2722 175 25 10 chr15 77410726 77411240 -26083734 + RLTR28 LTR ERVL 3 524 0 7 1175 277 234 63 25 chr15 77412431 77412510 -26082464 - ID4 SINE ID 0 83 2 7 1175 456 19 0 0 chr15 77413632 77413685 -26081289 + (TCCC)n Simple_repeat Simple_repeat 1 53 0 7 1175 2216 158 37 30 chr15 77414134 77414564 -26080410 + RLTR25B LTR ERVK 9 437 -666 7 1175 260 27 27 0 chr15 77414564 77414601 -26080373 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 7 1175 2193 197 36 52 chr15 77414601 77414673 -26080301 + RLTR25B LTR ERVK 438 503 -600 7 1175 22 35 0 0 chr15 77414728 77414757 -26080217 + AT_rich Low_complexity Low_complexity 1 29 0 7 1175 189 0 0 0 chr15 77415291 77415312 -26079662 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 7 1175 239 297 233 9 chr15 77418740 77418907 -26076067 - MIRb SINE MIR -18 250 66 7 1175 2926 204 42 36 chr15 77419306 77420168 -26074806 + L1_Mur2 LINE L1 596 1464 -4413 7 1175 226 315 85 21 chr15 77420576 77420670 -26074304 + Charlie11 DNA MER1_type 316 415 -1781 7 1175 1535 312 52 55 chr15 77420755 77421518 -26073456 - ORR1E-int LTR MaLR -551 819 59 7 1175 1393 107 47 89 chr15 77421578 77421835 -26073139 + ORR1A4 LTR MaLR 21 266 -63 7 1175 342 0 0 0 chr15 77421838 77421876 -26073098 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1175 231 372 10 0 chr15 77421944 77422046 -26072928 - ORR1E LTR MaLR -110 249 147 7 1175 570 241 65 7 chr15 77422078 77422216 -26072758 - B1_Mur2 SINE Alu -2 147 2 7 1175 505 270 52 13 chr15 77422216 77422367 -26072607 - ORR1E LTR MaLR -193 166 10 7 1175 582 121 59 29 chr15 77423406 77423508 -26071466 - B2_Mm2 SINE B2 0 195 91 7 1175 324 348 89 32 chr15 77423528 77423718 -26071256 + L1M5 LINE L1 3086 3286 -2860 7 1175 1802 157 7 106 chr15 77424406 77424446 -26070528 + RMER17C LTR ERVK 1 40 -370 7 1175 3411 78 2 83 chr15 77424446 77424963 -26070011 + MT2C_Mm LTR ERVL 1 475 0 7 1175 1802 157 7 106 chr15 77424963 77425377 -26069597 + RMER17C LTR ERVK 41 410 0 7 1175 242 268 28 14 chr15 77427088 77427160 -26067814 + MT2A LTR ERVL 51 123 -478 7 1175 213 0 81 0 chr15 77427213 77427250 -26067724 + (CAAAAA)n Simple_repeat Simple_repeat 1 40 0 7 1175 327 178 10 126 chr15 77427253 77427356 -26067618 + MT2A LTR ERVL 153 243 -290 7 1175 689 287 39 10 chr15 77428214 77428418 -26066556 - B4A SINE B4 -20 272 63 7 1175 330 26 0 0 chr15 77428506 77428545 -26066429 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 7 1175 313 259 188 8 chr15 77428545 77428662 -26066312 + B4A SINE B4 2 139 -153 7 1175 502 216 55 23 chr15 77428751 77428879 -26066095 - RLTR23 LTR ERV1 0 430 299 7 1175 232 213 61 76 chr15 77429100 77429166 -26065808 - RLTR23 LTR ERV1 -311 119 55 7 1175 458 204 302 13 chr15 77429221 77429380 -26065594 + ID_B1 SINE B4 1 205 -19 7 1175 391 227 82 0 chr15 77429899 77429996 -26064978 + B3 SINE B2 4 108 -108 7 1175 375 23 0 0 chr15 77430397 77430441 -26064533 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1175 247 288 85 59 chr15 77430444 77430562 -26064412 - B1F2 SINE Alu -26 123 3 7 1175 644 271 45 6 chr15 77430562 77430634 -26064340 - B4A SINE B4 -201 91 13 7 1175 274 255 91 50 chr15 77430670 77430769 -26064205 - ID_B1 SINE B4 0 224 122 7 1175 248 281 134 10 chr15 77430807 77430904 -26064070 - PB1D9 SINE Alu -7 113 5 7 1175 210 71 0 0 chr15 77430911 77430939 -26064035 + (TCTCCC)n Simple_repeat Simple_repeat 5 32 0 7 1175 538 231 61 8 chr15 77431005 77431136 -26063838 - B1_Mur1 SINE Alu -7 142 5 7 1175 471 247 131 60 chr15 77431534 77431676 -26063298 + B3A SINE B2 1 158 -35 7 1175 279 0 0 0 chr15 77431676 77431707 -26063267 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 1175 441 0 0 0 chr15 77431707 77431755 -26063219 + (GA)n Simple_repeat Simple_repeat 2 50 0 7 1175 270 247 131 60 chr15 77431755 77431779 -26063195 + B2_Mm1t SINE B2 159 179 -14 7 1175 186 43 0 0 chr15 77431783 77431806 -26063168 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 7 1175 937 140 129 0 chr15 77431807 77431978 -26062996 - B3 SINE B2 -15 201 9 7 1175 614 228 15 38 chr15 77432816 77432948 -26062026 - B3A SINE B2 -69 129 1 7 1175 25 31 0 0 chr15 77433643 77433675 -26061299 + AT_rich Low_complexity Low_complexity 1 32 0 7 1175 537 94 121 30 chr15 77433687 77433786 -26061188 - B1_Mur4 SINE Alu 0 150 43 7 1175 265 198 69 59 chr15 77433728 77433830 -26061144 - RLTR25B LTR ERVK -529 499 397 7 1175 297 203 0 33 chr15 77433898 77433959 -26061015 - B1_Mur4 SINE Alu -90 60 2 7 1175 368 259 74 13 chr15 77433980 77434129 -26060845 - L1MEc LINE L1 -5516 884 727 7 1175 2211 160 22 38 chr15 77434217 77434666 -26060308 + RMER10A LTR ERVL 1 442 0 7 1175 315 309 131 7 chr15 77434788 77434925 -26060049 - L1MEc LINE L1 -5924 476 323 7 1175 189 148 48 24 chr15 77435001 77435084 -26059890 + (CA)n Simple_repeat Simple_repeat 2 86 0 7 1175 232 158 35 0 chr15 77435148 77435205 -26059769 + (CA)n Simple_repeat Simple_repeat 1 59 0 7 1175 589 284 225 70 chr15 77435217 77435830 -26059144 - RMER12B LTR ERVK -182 1222 515 7 1175 262 233 81 65 chr15 77435864 77435988 -26058986 - L1MEc LINE L1 -5486 914 789 7 1175 435 291 0 28 chr15 77435988 77436094 -26058880 + RSINE1 SINE B4 62 164 -1 7 1175 29 28 0 0 chr15 77436096 77436132 -26058842 + AT_rich Low_complexity Low_complexity 1 36 0 7 1175 387 292 35 9 chr15 77436216 77436330 -26058644 + PB1D10 SINE Alu 1 117 0 7 1175 657 241 28 0 chr15 77436335 77436480 -26058494 + B3 SINE B2 1 149 -67 7 1175 23 0 0 0 chr15 77436920 77436943 -26058031 + AT_rich Low_complexity Low_complexity 1 23 0 7 1175 3450 23 15 0 chr15 77437081 77437471 -26057503 - MTA_Mm LTR MaLR 0 396 1 7 1175 2386 216 45 39 chr15 77437523 77438107 -26056867 - RLTR19-int LTR ERVK -1756 4381 3795 7 1175 543 249 91 33 chr15 77438136 77438340 -26056634 - RLTR19-int LTR ERVK -2947 3190 3020 7 1175 1646 252 31 87 chr15 77438474 77439241 -26055733 + RMER12 LTR ERVK 1 700 -1148 7 1175 497 316 75 58 chr15 77439268 77439713 -26055261 - RMER13A LTR ERVK 0 860 508 7 1175 262 58 38 19 chr15 77440157 77440210 -26054764 - B2_Mm2 SINE B2 -5 190 137 7 1175 2492 164 32 67 chr15 77440227 77440857 -26054117 - RMER17A LTR ERVK 0 751 154 7 1175 284 286 143 11 chr15 77440886 77441123 -26053851 - L1MB1 LINE L1 -96 6087 5823 7 1175 5157 260 83 77 chr15 77442689 77445313 -26049661 - RLTR14-int LTR ERV1 -2609 2708 69 7 1175 1967 141 16 0 chr15 77445372 77445684 -26049290 - ORR1A4 LTR MaLR -12 317 1 7 1175 10085 152 56 62 chr15 77445684 77447646 -26047328 - ORR1A4-int LTR MaLR 0 1963 12 7 1175 4314 108 3 2 chr15 77447646 77448232 -26046742 - LTRIS_Mus LTR ERV1 0 587 1 7 1175 10085 152 56 62 chr15 77448232 77448243 -26046731 - ORR1A4-int LTR MaLR -1952 11 1 7 1175 2209 138 0 0 chr15 77448245 77448572 -26046402 - ORR1A4 LTR MaLR -2 327 1 7 1175 1805 186 21 3 chr15 77448572 77448907 -26046067 - RLTR14 LTR ERV1 -35 347 7 7 1175 202 242 43 114 chr15 77449947 77450017 -26044957 - MIRm SINE MIR -117 159 95 7 1175 760 271 50 147 chr15 77452934 77452973 -26042001 - RLTR11B LTR ERVK -22 431 393 7 1175 234 0 0 0 chr15 77452973 77452999 -26041975 + (ATTG)n Simple_repeat Simple_repeat 1 26 0 7 1175 760 271 50 147 chr15 77452999 77453422 -26041552 - RLTR11B LTR ERVK -61 392 14 7 1175 229 329 40 0 chr15 77453450 77453526 -26041448 + MIRb SINE MIR 180 258 -10 7 1175 513 32 0 0 chr15 77453581 77453644 -26041330 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 1175 300 225 168 84 chr15 77453984 77454115 -26040859 + MLT1B LTR MaLR 1 142 -248 7 1175 331 286 70 26 chr15 77454150 77454265 -26040709 - B3A SINE B2 -74 121 2 8 1175 595 332 30 9 chr15 77454265 77454482 -26040492 - B4A SINE B4 -70 222 1 8 1175 379 290 190 68 chr15 77454581 77454992 -26039982 - MER31B LTR ERV1 -5 461 1 8 1175 481 240 41 0 chr15 77455871 77455992 -26038982 + B3 SINE B2 91 216 0 8 1175 291 322 75 66 chr15 77458093 77458306 -26036668 + MLT1B LTR MaLR 97 311 -133 7 1175 1466 235 83 68 chr15 77460514 77461029 -26033945 - RLTR11A LTR ERVK 0 528 6 8 1175 2126 199 56 46 chr15 77461361 77461862 -26033112 - RMER20A LTR ERVK 0 516 11 8 1175 339 25 0 0 chr15 77462184 77462224 -26032750 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 1176 22 0 0 0 chr15 77464382 77464404 -26030570 + AT_rich Low_complexity Low_complexity 1 22 0 8 1176 280 180 63 0 chr15 77464404 77464475 -26030499 + L1MC1 LINE L1 5856 5930 -1855 8 1176 277 298 170 30 chr15 77466929 77467164 -26027810 + MER31B LTR ERV1 194 461 -5 8 1176 188 302 62 16 chr15 77468011 77468075 -26026899 - MIRb SINE MIR -21 247 181 8 1176 2835 207 25 25 chr15 77468540 77469426 -26025548 + L1_Mur2 LINE L1 579 1464 -4413 8 1176 396 272 0 0 chr15 77469850 77469948 -26025026 - ORR1E-int LTR MaLR -1429 151 61 8 1176 2039 121 16 6 chr15 77469997 77470312 -26024662 + ORR1A3 LTR MaLR 1 318 -8 8 1176 405 0 0 0 chr15 77470332 77470377 -26024597 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 1176 586 216 0 25 chr15 77470549 77470668 -26024306 - B1F1 SINE Alu -1 148 33 8 1176 495 307 40 0 chr15 77470695 77470845 -26024129 - ORR1E LTR MaLR -200 159 4 8 1176 1861 159 37 34 chr15 77472181 77472590 -26022384 + RMER17C LTR ERVK 1 410 0 8 1176 692 164 27 48 chr15 77474124 77474271 -26020703 + B1F2 SINE Alu 6 149 0 8 1176 1089 213 19 0 chr15 77474386 77474593 -26020381 - B3 SINE B2 -4 212 2 8 1176 322 221 86 9 chr15 77474598 77474703 -26020271 - RCHARR1 DNA MER1_type -42 932 820 8 1176 1705 187 115 16 chr15 77474732 77475097 -26019877 - MTD LTR MaLR -13 406 6 8 1176 1175 232 31 7 chr15 77475101 77475392 -26019582 - RCHARR1 DNA MER1_type -154 820 523 8 1176 571 276 45 0 chr15 77475437 77475571 -26019403 - RSINE1 SINE B4 -13 152 13 8 1176 357 146 0 0 chr15 77475870 77475925 -26019049 + PB1D9 SINE Alu 1 55 -65 8 1176 492 218 9 38 chr15 77475971 77476076 -26018898 + B1_Mur4 SINE Alu 43 144 -6 8 1176 852 121 0 0 chr15 77476077 77476209 -26018765 + (GAAA)n Simple_repeat Simple_repeat 1 132 0 8 1176 456 19 0 0 chr15 77476228 77476281 -26018693 + (GGGGA)n Simple_repeat Simple_repeat 5 57 0 8 1176 641 275 59 70 chr15 77476282 77476499 -26018475 - RLTR40 LTR ERVK -64 753 463 8 1176 1501 214 65 24 chr15 77476499 77476699 -26018275 - ORR1C2 LTR MaLR 0 384 173 8 1176 675 37 0 0 chr15 77476699 77476781 -26018193 + (GA)n Simple_repeat Simple_repeat 1 82 0 8 1176 1501 214 65 24 chr15 77476781 77476949 -26018025 - ORR1C2 LTR MaLR -212 172 2 8 1176 641 268 70 88 chr15 77476949 77477115 -26017859 - RLTR40 LTR ERVK -355 462 300 8 1176 339 257 80 0 chr15 77477283 77477396 -26017578 - B3 SINE B2 -3 213 92 8 1176 2698 172 31 10 chr15 77478750 77479261 -26015713 + RLTR28 LTR ERVL 3 524 0 8 1176 873 94 150 0 chr15 77479856 77479983 -26014991 - B1_Mm SINE Alu 0 147 2 8 1176 2046 214 72 49 chr15 77482231 77482843 -26012131 + RLTR25B LTR ERVK 12 597 -431 8 1176 375 265 12 0 chr15 77482775 77482858 -26012116 + MT2B LTR ERVL 202 285 -316 8 1176 500 200 46 39 chr15 77482996 77483126 -26011848 + RLTR25B LTR ERVK 898 1028 0 8 1176 287 211 56 0 chr15 77485500 77485571 -26009403 + L1MC3 LINE L1 5856 5930 -1855 8 1176 3275 82 13 11 chr15 77487878 77487906 -26007068 + MT2C_Mm LTR ERVL 20 44 -431 8 1176 3548 20 2 2 chr15 77487906 77488302 -26006672 + MTA_Mm LTR MaLR 1 396 0 8 1176 3275 82 13 11 chr15 77488302 77488728 -26006246 + MT2C_Mm LTR ERVL 45 475 0 8 1176 1601 159 10 95 chr15 77488728 77489138 -26005836 + RMER17C LTR ERVK 36 410 0 8 1176 336 77 0 0 chr15 77490646 77490698 -26004276 + (TC)n Simple_repeat Simple_repeat 1 52 0 8 1176 279 0 0 0 chr15 77490720 77490751 -26004223 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 1176 873 188 82 11 chr15 77490763 77490946 -26004028 + ORR1C2 LTR MaLR 189 384 0 8 1176 459 219 299 37 chr15 77490948 77491162 -26003812 + RLTR40 LTR ERVK 465 734 -83 8 1176 345 100 0 0 chr15 77491169 77491219 -26003755 + (CTTG)n Simple_repeat Simple_repeat 2 51 0 8 1176 804 172 7 29 chr15 77491222 77491360 -26003614 - B1_Mus2 SINE Alu -12 135 1 8 1176 337 261 83 8 chr15 77491555 77491675 -26003299 + RLTR25B LTR ERVK 658 786 -242 8 1176 398 132 289 0 chr15 77491671 77491754 -26003220 + RLTR25A LTR ERVK 997 1103 0 8 1176 357 66 213 0 chr15 77492006 77492067 -26002907 + MT2B LTR ERVL 1 74 -527 8 1176 4489 128 65 20 chr15 77492529 77493385 -26001589 + RLTR13D3 LTR ERVK 1 1114 0 8 1176 815 324 37 29 chr15 77493784 77494273 -26000701 - RLTR6-int LTR ERV1 -128 7650 7158 8 1176 1698 163 16 40 chr15 77494438 77494809 -26000165 + RMER10A LTR ERVL 81 442 0 8 1176 404 263 239 26 chr15 77494931 77495165 -25999809 - L1MEc LINE L1 -5924 476 193 8 1176 2141 154 32 5 chr15 77495281 77495886 -25999088 + RLTR33 LTR ERVK 1 663 -15 8 1176 263 263 100 10 chr15 77495994 77496094 -25998880 - RMER10A LTR ERVL -13 429 321 8 1176 342 288 11 26 chr15 77496188 77496351 -25998623 + GA-rich Low_complexity Low_complexity 1 160 0 8 1176 836 233 22 22 chr15 77496611 77496791 -25998183 + B3 SINE B2 4 183 -33 8 1176 190 0 32 32 chr15 77496791 77496822 -25998152 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 1176 537 16 0 0 chr15 77496863 77496925 -25998049 + (GA)n Simple_repeat Simple_repeat 1 62 0 8 1176 265 324 35 35 chr15 77497007 77497122 -25997852 + PB1D10 SINE Alu 1 115 -2 8 1176 491 202 70 173 chr15 77497132 77497288 -25997686 + B1_Mur1 SINE Alu 10 149 0 8 1176 378 269 13 0 chr15 77497331 77497409 -25997565 + B4A SINE B4 24 102 -190 8 1176 4671 153 56 48 chr15 77497421 77498316 -25996658 - RMER19B LTR ERVK 0 902 1 8 1176 534 259 7 59 chr15 77498318 77498470 -25996504 - RLTR12B LTR ERVK -268 260 117 8 1176 803 240 69 34 chr15 77498534 77498767 -25996207 - RMER12 LTR ERVK -104 1218 978 8 1176 650 105 174 20 chr15 77498766 77498913 -25996061 - ORR1B1 LTR MaLR -242 152 1 8 1176 660 316 35 31 chr15 77500003 77500264 -25994710 + RMER15 LTR ERVL 314 575 0 1 1176 822 239 14 54 chr15 77500830 77501051 -25993923 - B3 SINE B2 -4 212 1 2 1176 3388 276 81 70 chr15 77501103 77501354 -25993620 + Lx5 LINE L1 5651 5904 -1146 3 1176 1011 116 39 39 chr15 77501354 77501534 -25993440 + B2_Mm2 SINE B2 2 181 -14 4 1176 3388 276 81 70 chr15 77501534 77502663 -25992311 + Lx5 LINE L1 5905 7047 -3 3 1176 254 255 155 18 chr15 77502835 77503003 -25991971 - L1MB3 LINE L1 -187 5996 5806 5 1176 278 281 61 10 chr15 77503020 77503167 -25991807 - L1MB3 LINE L1 -442 5729 5574 5 1176 502 263 175 70 chr15 77504439 77504770 -25990204 - RLTR9A LTR ERVK 0 368 3 6 1176 1032 89 0 0 chr15 77505212 77505358 -25989616 + B1_Mus1 SINE Alu 3 148 0 7 1176 304 255 40 69 chr15 77505420 77505521 -25989453 - ETnERV2-int LTR ERVK -1201 6205 6108 8 1176 16473 104 40 35 chr15 77505535 77507256 -25987718 - RMER16-int LTR ERVK -1224 4182 2489 9 1176 1257 41 0 0 chr15 77507256 77507402 -25987572 - B1_Mm SINE Alu 0 147 2 1 1176 16473 184 73 70 chr15 77507402 77509864 -25985110 - RMER16-int LTR ERVK -3864 3542 1059 9 1176 577 330 25 21 chr15 77510392 77510717 -25984257 + MuRRS4-int LTR ERV1 1417 1742 -3321 1 1176 465 230 21 49 chr15 77510701 77510843 -25984131 + MMVL30-int LTR ERV1 1493 1630 -2068 1 1176 18250 124 9 18 chr15 77510843 77514300 -25980674 + L1Md_F LINE L1 509 3959 -1924 1 1176 297 268 61 76 chr15 77514300 77514498 -25980476 - RLTR46 LTR ERVK 0 320 126 1 1176 40466 189 21 4 chr15 77514627 77521940 -25973034 - IAPEY3-int LTR ERVK 0 7680 246 1 1176 266 191 60 60 chr15 77521925 77521992 -25972982 - IAPLTR3-int LTR ERVK -6375 446 380 1 1176 310 273 61 76 chr15 77522277 77522475 -25972499 - RLTR46 LTR ERVK 0 320 126 1 1176 14004 77 16 0 chr15 77522565 77524922 -25970052 + L1_Mus2 LINE L1 3954 6337 -229 1 1176 574 74 12 0 chr15 77524922 77525003 -25969971 + L1_Mus2 LINE L1 6479 6560 -6 1 1176 3789 246 35 33 chr15 77525016 77527050 -25967924 + MMVL30-int LTR ERV1 2876 5392 -2386 1 1176 501 244 50 31 chr15 77527036 77527197 -25967777 + MMVL30-int LTR ERV1 7613 7776 -2 1 1176 266 303 59 33 chr15 77527381 77527612 -25967362 + RLTR41 LTR ERV1 186 457 -50 1 1176 391 136 0 0 chr15 77527630 77527696 -25967278 - RLTR14 LTR ERV1 -162 220 155 2 1176 516 86 0 0 chr15 77527697 77527767 -25967207 + B2_Mm2 SINE B2 2 71 -124 2 1176 1479 199 114 40 chr15 77527767 77528169 -25966805 + RMER16 LTR ERVK 1 432 -101 2 1176 291 279 65 16 chr15 77528180 77528304 -25966670 + RLTR6-int LTR ERV1 7647 7776 -2 2 1176 655 75 0 0 chr15 77528476 77528569 -25966405 + RMER16 LTR ERVK 441 533 0 2 1176 854 92 0 8 chr15 77528569 77528700 -25966274 + B2_Mm2 SINE B2 66 195 0 2 1176 979 139 6 0 chr15 77528699 77528864 -25966110 - RLTR14 LTR ERV1 -214 168 3 2 1176 667 178 117 33 chr15 77529445 77529625 -25965349 - RMER17C LTR ERVK 0 410 216 2 1176 3028 116 38 30 chr15 77530206 77530677 -25964297 + MT2C_Mm LTR ERVL 1 475 0 2 1176 213 196 0 0 chr15 77533099 77533150 -25961824 + (TGG)n Simple_repeat Simple_repeat 1 51 0 2 1176 3820 107 7 22 chr15 77533264 77533849 -25961125 + RLTR19-int LTR ERVK 1429 2004 -4133 3 1176 311 172 52 103 chr15 77534346 77534443 -25960531 - RLTR42-int LTR ERVK -3100 3037 2946 3 1176 374 252 192 58 chr15 77534667 77534979 -25959995 - RLTR42-int LTR ERVK -3455 2682 2329 3 1176 462 192 102 53 chr15 77534957 77535132 -25959842 - RLTR42-int LTR ERVK -3381 2141 1958 3 1176 1453 75 16 0 chr15 77535132 77535318 -25959656 + B2_Mm2 SINE B2 1 189 -6 3 1176 462 192 102 53 chr15 77535318 77535329 -25959645 - RLTR42-int LTR ERVK -3565 1957 1947 3 1176 1341 281 55 13 chr15 77535749 77536225 -25958749 - RMER5 LTR ERV1 -1 533 38 3 1176 3371 59 84 5 chr15 77536350 77536790 -25958184 + MT2C_Mm LTR ERVL 1 475 0 3 1176 4575 48 48 0 chr15 77536962 77537522 -25957452 - LTRIS_Mus LTR ERV1 0 587 1 3 1176 4520 136 17 6 chr15 77537818 77538666 -25956308 - ORR1A2-int LTR MaLR -688 1104 259 3 1176 1209 48 0 0 chr15 77538666 77538813 -25956161 - B1_Mus2 SINE Alu 0 147 1 3 1176 1859 95 6 92 chr15 77538813 77539082 -25955892 - ORR1A2 LTR MaLR -69 258 1 3 1176 283 192 19 0 chr15 77539082 77539123 -25955851 + ID_B1 SINE B4 163 204 -20 3 1176 314 262 7 0 chr15 77539810 77539959 -25955015 + (TG)n Simple_repeat Simple_repeat 1 150 0 3 1176 835 268 117 19 chr15 77539964 77540230 -25954744 - B4A SINE B4 0 292 1 4 1176 279 0 0 0 chr15 77540258 77540289 -25954685 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1176 217 185 148 0 chr15 77540413 77540467 -25954507 - PB1D9 SINE Alu -50 70 9 4 1176 229 324 45 0 chr15 77541414 77541525 -25953449 + L1M5 LINE L1 5606 5721 -403 4 1176 1896 176 33 6 chr15 77541977 77542343 -25952631 + ORR1C1 LTR MaLR 3 378 0 4 1176 1582 158 26 109 chr15 77543026 77543403 -25951571 - ORR1B1 LTR MaLR -8 386 41 4 1176 447 204 19 0 chr15 77543438 77543541 -25951433 - B1_Mur4 SINE Alu -34 116 12 4 1176 243 0 0 0 chr15 77543566 77543593 -25951381 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 4 1176 926 201 80 5 chr15 77544021 77544221 -25950753 + B3 SINE B2 1 215 -1 4 1176 267 212 45 15 chr15 77545184 77545251 -25949723 + MIRb SINE MIR 179 247 -21 4 1176 1223 148 0 0 chr15 77545278 77545297 -25949677 - B2_Mm2 SINE B2 -6 189 171 5 1176 246 32 0 0 chr15 77545297 77545328 -25949646 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 1176 1223 148 0 0 chr15 77545328 77545497 -25949477 - B2_Mm2 SINE B2 -25 170 2 5 1176 264 277 70 26 chr15 77546027 77546142 -25948832 - B3A SINE B2 -74 121 2 5 1176 567 312 16 5 chr15 77546167 77546360 -25948614 - B4A SINE B4 -97 195 1 5 1176 791 262 14 37 chr15 77547456 77547670 -25947304 + B3 SINE B2 4 212 -4 5 1176 4783 189 68 102 chr15 77550016 77550403 -25944571 + RLTR21 LTR ERVK 1 411 -1161 5 1176 1325 106 0 16 chr15 77550403 77550594 -25944380 + B2_Mm2 SINE B2 1 188 -7 5 1176 4783 189 68 102 chr15 77550594 77551279 -25943695 + RLTR21 LTR ERVK 412 1004 -568 5 1176 1122 80 0 0 chr15 77551279 77551416 -25943558 - B1_Mus2 SINE Alu -9 138 2 5 1176 4783 200 61 102 chr15 77551416 77551891 -25943083 + RLTR21 LTR ERVK 1005 1436 -136 5 1176 1051 83 0 0 chr15 77552240 77552385 -25942589 + B2_Mm2 SINE B2 3 147 -48 5 1176 524 15 15 0 chr15 77552385 77552450 -25942524 + (TA)n Simple_repeat Simple_repeat 1 66 0 5 1176 189 0 0 0 chr15 77552450 77552470 -25942504 + (GA)n Simple_repeat Simple_repeat 2 22 0 6 1176 459 0 0 0 chr15 77554975 77555026 -25939948 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1176 498 288 7 14 chr15 77555441 77555582 -25939392 + RSINE1 SINE B4 4 143 -22 6 1176 360 0 0 0 chr15 77558243 77558283 -25936691 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1176 510 223 3 3 chr15 77558295 77558411 -25936563 - B3A SINE B2 -43 173 58 6 1176 1708 26 0 0 chr15 77558527 77558717 -25936257 - B2_Mm1a SINE B2 -3 190 1 6 1176 2439 169 59 20 chr15 77560798 77561305 -25933669 - RLTR11A2 LTR ERVK 0 527 1 6 1176 273 286 13 0 chr15 77561670 77561747 -25933227 - ID4 SINE ID -2 81 4 6 1176 252 0 0 0 chr15 77563813 77563841 -25931133 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1176 1236 122 83 9 chr15 77564244 77564460 -25930514 + MTB_Mm LTR MaLR 1 232 -175 6 1176 407 149 0 0 chr15 77564456 77564523 -25930451 + MTB_Mm LTR MaLR 334 400 0 6 1176 579 288 12 18 chr15 77565152 77565315 -25929659 - B4 SINE B4 -128 164 3 7 1176 1130 263 30 24 chr15 77567188 77567519 -25927455 - RMER5 LTR ERV1 0 534 202 7 1176 1521 58 16 0 chr15 77567908 77568097 -25926877 - B2_Mm1a SINE B2 -1 192 1 7 1176 750 209 28 28 chr15 77568204 77568386 -25926588 - RMER5 LTR ERV1 -315 219 38 7 1176 1113 85 0 0 chr15 77569438 77569591 -25925383 + B2_Mm2 SINE B2 3 155 -40 7 1176 6168 96 15 3 chr15 77569603 77570459 -25924515 - L1_Mus3 LINE L1 -1 6637 5772 7 1176 281 102 41 0 chr15 77570460 77570509 -25924465 + (GAAA)n Simple_repeat Simple_repeat 3 53 0 7 1176 905 232 79 46 chr15 77571104 77571449 -25923525 + MT2B LTR ERVL 94 601 0 7 1176 414 262 19 0 chr15 77572009 77572116 -25922858 + ID_B1 SINE B4 99 207 -17 7 1176 1625 149 6 20 chr15 77572464 77572732 -25922242 + RLTR22_Mus LTR ERVK 28 285 -1563 7 1176 653 36 0 0 chr15 77572732 77572816 -25922158 - MT2C_Mm LTR ERVL 0 475 392 7 1176 1370 77 14 0 chr15 77572815 77573022 -25921952 - MTA_Mm-int LTR MaLR -888 210 1 8 1176 3254 34 48 0 chr15 77573022 77573400 -25921574 - MTA_Mm LTR MaLR 0 396 1 8 1176 10739 54 19 19 chr15 77573400 77574398 -25920576 + RLTR22_Mus LTR ERVK 289 1282 -526 8 1176 411 113 0 0 chr15 77574398 77574469 -25920505 + (TG)n Simple_repeat Simple_repeat 2 72 0 8 1176 10739 54 19 19 chr15 77574469 77574986 -25919988 + RLTR22_Mus LTR ERVK 1283 1803 -5 8 1176 670 275 6 18 chr15 77574996 77575166 -25919808 + RMER20A LTR ERVK 349 516 0 8 1176 1000 147 65 12 chr15 77576400 77576604 -25918370 - ORR1C1 LTR MaLR -7 387 176 8 1176 993 234 228 67 chr15 77576865 77577300 -25917674 + RLTR16 LTR ERVK 1 505 0 8 1176 582 103 0 0 chr15 77577368 77577455 -25917519 + (CA)n Simple_repeat Simple_repeat 2 88 0 8 1176 369 221 0 0 chr15 77577776 77577844 -25917130 - B1_Mus2 SINE Alu -78 69 2 8 1176 3093 155 32 6 chr15 77578131 77578630 -25916344 - RLTR18B LTR ERVK 0 512 1 8 1176 1008 211 5 10 chr15 77579454 77579646 -25915328 + B3A SINE B2 3 193 -5 8 1176 414 205 26 0 chr15 77580683 77580761 -25914213 + ID2 SINE ID 4 83 0 9 1176 519 335 20 41 chr15 77580956 77581152 -25913822 + B3A SINE B2 1 192 -6 9 1176 839 211 0 0 chr15 77581219 77581361 -25913613 + B1_Mur2 SINE Alu 2 143 -6 9 1176 1075 191 98 0 chr15 77581419 77581613 -25913361 + B3 SINE B2 4 216 0 9 1176 865 242 82 5 chr15 77581650 77581858 -25913116 + ID_B1 SINE B4 1 224 0 9 1176 1377 64 0 0 chr15 77582180 77582477 -25912497 + (TGAG)n Simple_repeat Simple_repeat 1 297 0 9 1176 441 252 97 26 chr15 77582603 77582758 -25912216 + B3 SINE B2 48 213 -3 9 1176 723 44 0 0 chr15 77584354 77584445 -25910529 + (TC)n Simple_repeat Simple_repeat 1 91 0 9 1176 566 242 17 0 chr15 77584659 77584779 -25910195 + RSINE1 SINE B4 3 124 -41 9 1176 333 0 0 0 chr15 77584779 77584816 -25910158 + (CA)n Simple_repeat Simple_repeat 2 38 0 9 1176 490 270 8 67 chr15 77584823 77584840 -25910134 + ID_B1 SINE B4 78 149 -143 1 1176 792 186 7 0 chr15 77584840 77584980 -25909994 + B1_Mur1 SINE Alu 9 149 0 1 1176 490 270 8 67 chr15 77584980 77585000 -25909974 + ID_B1 SINE B4 150 246 -46 1 1176 510 31 0 0 chr15 77585712 77585776 -25909198 + (CCCTG)n Simple_repeat Simple_repeat 5 68 0 1 1176 369 0 0 0 chr15 77585897 77585938 -25909036 + (GGGA)n Simple_repeat Simple_repeat 4 44 0 1 1176 296 330 0 33 chr15 77586397 77586488 -25908486 + PB1D10 SINE Alu 10 97 -20 1 1176 203 214 135 56 chr15 77586711 77586800 -25908174 + MIR SINE MIR 36 131 -77 1 1176 910 74 10 42 chr15 77588392 77588563 -25906411 - B2_Mm2 SINE B2 -27 166 2 1 1176 672 206 192 11 chr15 77589022 77589183 -25905791 + B3 SINE B2 2 196 -20 1 1176 6066 48 67 13 chr15 77589183 77589948 -25905026 + RLTR13D1 LTR ERVK 1 806 0 1 1176 672 206 192 11 chr15 77589948 77589968 -25905006 + B3 SINE B2 197 216 0 1 1176 1349 110 16 10 chr15 77590209 77590402 -25904572 + B2_Mm2 SINE B2 1 194 -1 1 1176 306 73 0 0 chr15 77591226 77591267 -25903707 + (A)n Simple_repeat Simple_repeat 1 41 0 1 1176 300 242 15 0 chr15 77592707 77592773 -25902201 + tRNA-Ala-GCA tRNA tRNA 2 68 -7 1 1177 1164 42 21 0 chr15 77595340 77595483 -25899491 - B1_Mus2 SINE Alu 0 147 2 1 1177 490 314 113 20 chr15 77598302 77598497 -25896477 - B3 SINE B2 -3 213 1 1 1177 381 280 11 11 chr15 77598844 77598938 -25896036 + RSINE1 SINE B4 72 165 0 1 1177 915 182 0 20 chr15 77600733 77600884 -25894090 + B1_Mur2 SINE Alu 2 149 0 1 1177 217 178 22 0 chr15 77601830 77601875 -25893099 + CT-rich Low_complexity Low_complexity 1 46 0 1 1177 470 227 51 43 chr15 77601881 77602019 -25892955 - B1F2 SINE Alu -8 141 3 1 1177 727 263 6 18 chr15 77602637 77602807 -25892167 + B3 SINE B2 29 196 -20 1 1177 28 29 0 0 chr15 77602839 77602874 -25892100 + AT_rich Low_complexity Low_complexity 1 35 0 1 1177 375 242 42 10 chr15 77603031 77603127 -25891847 + L1MC1 LINE L1 6222 6320 -13 1 1177 425 250 117 0 chr15 77603142 77603262 -25891712 + RSINE1 SINE B4 11 144 -21 1 1177 238 356 13 13 chr15 77603361 77603512 -25891462 + GA-rich Low_complexity Low_complexity 4 154 0 1 1177 378 0 0 0 chr15 77605157 77605199 -25889775 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1177 247 269 199 26 chr15 77605754 77605945 -25889029 + ORR1D2 LTR MaLR 5 228 -142 1 1177 527 115 265 34 chr15 77606898 77607015 -25887959 - B1_Mur2 SINE Alu -5 144 1 1 1177 1285 208 88 43 chr15 77608998 77609349 -25885625 + MTEa LTR MaLR 13 379 0 1 1177 811 251 148 33 chr15 77611094 77611393 -25883581 + ORR1D2 LTR MaLR 35 372 -2 1 1177 319 297 20 10 chr15 77615239 77615341 -25879633 - MIRb SINE MIR -126 142 33 1 1177 318 26 0 0 chr15 77619298 77619337 -25875637 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 1177 239 370 0 9 chr15 77620052 77620161 -25874813 + PB1D10 SINE Alu 5 112 -5 1 1177 245 267 115 49 chr15 77620626 77620748 -25874226 - B4A SINE B4 -52 240 111 1 1177 569 145 0 26 chr15 77620642 77620753 -25874221 - B1_Mur3 SINE Alu 0 120 21 1 1177 197 417 0 35 chr15 77623295 77623439 -25871535 - MIRb SINE MIR -116 152 14 1 1177 605 229 0 22 chr15 77627217 77627400 -25867574 + (CA)n Simple_repeat Simple_repeat 1 179 0 1 1177 224 288 0 0 chr15 77630204 77630263 -25864711 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1177 234 0 0 0 chr15 77630807 77630833 -25864141 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1 1177 1428 80 27 0 chr15 77631905 77632093 -25862881 + B2_Mm2 SINE B2 1 193 -2 1 1177 572 226 90 8 chr15 77633086 77633220 -25861754 - B3 SINE B2 -26 190 46 1 1177 239 220 0 0 chr15 77635791 77635841 -25859133 - MER117 DNA MER1_type -37 160 111 1 1177 305 232 0 118 chr15 77635902 77635995 -25858979 + MER20 DNA MER1_type 5 86 -133 1 1177 804 199 7 7 chr15 77638760 77638907 -25856067 + B1_Mus2 SINE Alu 1 147 0 1 1177 381 43 0 0 chr15 77639031 77639078 -25855896 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1177 195 42 0 0 chr15 77640218 77640242 -25854732 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 1177 249 57 0 0 chr15 77640760 77640795 -25854179 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1177 303 28 0 0 chr15 77641308 77641344 -25853630 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1177 379 235 12 12 chr15 77645092 77645178 -25849796 + PB1D10 SINE Alu 21 106 -11 1 1177 218 317 97 8 chr15 77645289 77645413 -25849561 - MIRb SINE MIR -93 175 41 1 1177 666 143 9 0 chr15 77645517 77645622 -25849352 + B1_Mur4 SINE Alu 1 106 -44 1 1177 387 208 122 103 chr15 77645648 77645852 -25849122 + B3 SINE B2 1 208 -8 1 1177 346 236 54 18 chr15 77646154 77646266 -25848708 - BC1_Mm scRNA scRNA -32 120 5 1 1177 246 282 61 49 chr15 77648213 77648295 -25846679 - MER20 DNA MER1_type -29 190 108 1 1177 268 273 0 29 chr15 77648440 77648508 -25846466 + ID4 SINE ID 8 73 -10 1 1177 743 208 28 0 chr15 77648535 77648679 -25846295 + B1_Mur1 SINE Alu 1 148 -1 1 1177 180 111 0 0 chr15 77649717 77649744 -25845230 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 1 1177 197 267 201 0 chr15 77650690 77650789 -25844185 + MIRc SINE MIR 26 146 -122 1 1177 231 61 0 0 chr15 77650972 77651005 -25843969 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1177 327 333 0 0 chr15 77652438 77652528 -25842446 + G-rich Low_complexity Low_complexity 1 90 0 1 1177 311 250 57 48 chr15 77653172 77653277 -25841697 + B1_Mur2 SINE Alu 3 108 -41 1 1177 285 29 0 0 chr15 77654617 77654651 -25840323 + (CGGA)n Simple_repeat Simple_repeat 4 37 0 1 1177 1207 74 0 0 chr15 77655476 77655624 -25839350 + B1_Mus1 SINE Alu 1 148 0 1 1177 623 150 68 45 chr15 77655639 77655772 -25839202 + B3A SINE B2 1 136 -62 1 1177 1487 168 138 53 chr15 77656084 77656462 -25838512 + RMER17C LTR ERVK 1 410 0 1 1177 368 318 72 26 chr15 77656561 77656713 -25838261 + RSINE1 SINE B4 5 163 -2 1 1177 307 382 0 0 chr15 77656731 77656909 -25838065 + (CA)n Simple_repeat Simple_repeat 2 179 0 1 1177 258 95 0 0 chr15 77657168 77657210 -25837764 + (TTTTG)n Simple_repeat Simple_repeat 3 44 0 1 1177 1293 27 0 0 chr15 77657210 77657357 -25837617 - B1_Mus1 SINE Alu 0 148 2 1 1177 246 226 154 7 chr15 77658863 77658941 -25836033 - B4A SINE B4 0 292 229 1 1177 315 0 0 0 chr15 77658941 77658976 -25835998 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1177 180 0 0 0 chr15 77658976 77658995 -25835979 + (CG)n Simple_repeat Simple_repeat 2 21 0 1 1177 457 240 152 25 chr15 77658997 77659155 -25835819 - B3 SINE B2 -35 181 4 1 1177 190 0 32 32 chr15 77659161 77659192 -25835782 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 1 1177 1105 71 45 0 chr15 77659192 77659346 -25835628 - B2_Mm2 SINE B2 -34 161 1 1 1177 1030 51 7 28 chr15 77659378 77659519 -25835455 - B1_Mm SINE Alu -9 138 1 1 1177 473 297 72 26 chr15 77659569 77659721 -25835253 - B4A SINE B4 -133 159 1 1 1177 300 27 0 0 chr15 77659732 77659769 -25835205 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1177 198 0 0 0 chr15 77659888 77659910 -25835064 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1177 181 300 0 48 chr15 77659929 77659992 -25834982 - MIR SINE MIR -107 101 42 1 1177 1137 154 43 0 chr15 77660624 77660832 -25834142 - URR1A DNA MER1_type 0 226 10 1 1177 469 258 55 88 chr15 77660625 77660863 -25834111 + CYRA11_Mm Unknown Y-chromosome 172 401 -216 1 1177 427 169 0 0 chr15 77660878 77660949 -25834025 + B1_Mur2 SINE Alu 28 98 -51 1 1177 576 260 27 7 chr15 77661127 77661274 -25833700 + B3A SINE B2 1 150 -48 1 1177 220 202 111 32 chr15 77663253 77663329 -25831645 + L2b LINE L2 3106 3193 -194 1 1177 1592 36 0 30 chr15 77663349 77663547 -25831427 + B2_Mm1a SINE B2 2 193 0 1 1177 189 222 22 0 chr15 77664167 77664212 -25830762 + L2b LINE L2 3310 3355 -20 1 1177 1475 182 60 33 chr15 77664322 77664657 -25830317 + MTD LTR MaLR 66 409 -10 1 1177 636 182 36 18 chr15 77665883 77665995 -25828979 - PB1D9 SINE Alu -5 115 2 1 1177 220 214 50 67 chr15 77666052 77666112 -25828862 + ID4 SINE ID 18 76 -7 1 1177 598 176 0 62 chr15 77667091 77667236 -25827738 + B1_Mur1 SINE Alu 14 149 0 1 1177 243 0 0 0 chr15 77667263 77667290 -25827684 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1177 382 287 98 28 chr15 77667599 77667814 -25827160 - L1MC4a LINE L1 -2021 5861 5632 1 1177 543 250 25 78 chr15 77667867 77668071 -25826903 + B3A SINE B2 2 194 -4 1 1177 398 348 60 12 chr15 77668669 77668835 -25826139 - MIRb SINE MIR -72 196 23 1 1177 363 252 106 10 chr15 77668872 77668976 -25825998 + RSINE1 SINE B4 11 124 -41 1 1177 202 211 0 0 chr15 77669286 77669338 -25825636 + T-rich Low_complexity Low_complexity 1 52 0 1 1177 198 0 0 0 chr15 77669570 77669592 -25825382 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1 1177 462 14 56 42 chr15 77669837 77669909 -25825065 + B1_Mm SINE Alu 75 147 0 1 1177 315 0 0 0 chr15 77670829 77670864 -25824110 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1 1177 574 130 70 0 chr15 77671086 77671186 -25823788 - U6 snRNA snRNA 0 107 1 1 1177 207 251 16 36 chr15 77673177 77673280 -25821694 + L2a LINE L2 3013 3111 -276 1 1177 23 0 0 0 chr15 77673705 77673728 -25821246 + AT_rich Low_complexity Low_complexity 1 23 0 1 1177 278 169 45 30 chr15 77673757 77673824 -25821150 + PB1D10 SINE Alu 28 95 -22 1 1177 935 75 82 0 chr15 77673896 77674030 -25820944 + B1_Mus1 SINE Alu 4 148 0 2 1177 297 310 140 0 chr15 77674137 77674237 -25820737 + ID_B1 SINE B4 83 196 -28 2 1177 1558 31 5 0 chr15 77674298 77674489 -25820485 + B2_Mm1a SINE B2 2 193 0 2 1177 302 247 24 12 chr15 77674494 77674576 -25820398 + L1M5 LINE L1 5628 5710 -452 2 1177 273 279 105 0 chr15 77674587 77674673 -25820301 + RSINE1 SINE B4 14 108 -57 2 1177 258 289 9 80 chr15 77674677 77674790 -25820184 + PB1D9 SINE Alu 4 108 -12 2 1177 400 196 47 39 chr15 77674851 77674973 -25820001 + PB1D10 SINE Alu 1 118 -2 2 1177 1482 38 22 0 chr15 77674977 77675162 -25819812 + B2_Mm1t SINE B2 2 190 -3 2 1177 542 221 66 0 chr15 77675164 77675286 -25819688 + B3 SINE B2 1 130 -86 2 1177 473 265 143 19 chr15 77675622 77675776 -25819198 - MIRb SINE MIR -28 240 68 2 1177 628 128 95 8 chr15 77676021 77676147 -25818827 + B1_Mur4 SINE Alu 1 137 -13 2 1177 235 277 28 195 chr15 77676250 77676355 -25818619 + L1MA5 LINE L1 5729 5804 -496 2 1177 1326 79 5 5 chr15 77676355 77676545 -25818429 - B2_Mm1a SINE B2 -2 191 2 2 1177 229 277 28 195 chr15 77676545 77676690 -25818284 + L1MA5 LINE L1 5805 5937 -363 2 1177 366 91 0 0 chr15 77676850 77676905 -25818069 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1177 980 72 0 14 chr15 77677253 77677394 -25817580 + B1_Mm SINE Alu 9 147 0 2 1177 665 203 7 42 chr15 77677889 77678033 -25816941 + B1F1 SINE Alu 10 148 -1 2 1177 233 254 109 90 chr15 77677901 77678057 -25816917 - YREP_Mm Unknown Unknown -1510 302 144 2 1177 409 274 78 7 chr15 77678115 77678180 -25816794 + ID SINE ID 7 82 -142 2 1177 371 321 9 0 chr15 77678180 77678292 -25816682 + PB1D10 SINE Alu 1 113 -4 2 1177 770 265 39 112 chr15 77678958 77679396 -25815578 - L1MB8 LINE L1 -12 6166 5761 2 1177 375 23 0 0 chr15 77679795 77679839 -25815135 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1177 544 236 0 16 chr15 77679848 77679973 -25815001 - RSINE1 SINE B4 -41 124 2 2 1177 194 276 143 0 chr15 77680362 77680460 -25814514 - MIRb SINE MIR -35 233 122 2 1177 358 257 0 96 chr15 77680589 77680714 -25814260 + MT2B LTR ERVL 152 264 -337 2 1177 799 171 14 0 chr15 77680608 77680748 -25814226 + B1_Mus2 SINE Alu 6 147 0 2 1177 1050 112 47 0 chr15 77680748 77680918 -25814056 + B2_Mm1t SINE B2 2 179 -14 2 1177 296 113 340 9 chr15 77680960 77681066 -25813908 + B2_Mm2 SINE B2 54 194 -1 2 1177 285 299 11 0 chr15 77681132 77681219 -25813755 + PB1D10 SINE Alu 29 116 -1 2 1177 228 228 17 34 chr15 77681234 77681293 -25813681 + ID4_ SINE ID 16 73 -10 2 1177 575 149 9 0 chr15 77681302 77681409 -25813565 + GA-rich Low_complexity Low_complexity 4 111 0 2 1177 210 345 37 0 chr15 77681520 77681607 -25813367 + ID2 SINE ID 2 91 -61 2 1177 244 211 28 0 chr15 77681608 77681679 -25813295 + GA-rich Low_complexity Low_complexity 2 74 0 2 1177 741 243 69 10 chr15 77682074 77682278 -25812696 + B3 SINE B2 1 216 0 2 1177 444 244 0 0 chr15 77682416 77682502 -25812472 + PB1D7 SINE Alu 14 99 -21 2 1177 666 144 8 25 chr15 77682514 77682635 -25812339 + PB1D9 SINE Alu 2 120 0 2 1177 501 264 35 0 chr15 77682796 77682940 -25812034 - B1_Mur4 SINE Alu -1 149 1 2 1177 990 201 55 0 chr15 77682965 77683164 -25811810 - B3 SINE B2 -6 210 1 2 1177 276 305 31 21 chr15 77683371 77683468 -25811506 + ID_B1 SINE B4 78 175 -49 2 1177 235 197 61 0 chr15 77683471 77683537 -25811437 + L1MB7 LINE L1 5970 6039 -145 2 1177 3406 45 28 0 chr15 77683566 77683990 -25810984 - RLTR10C LTR ERVK 0 436 1 2 1177 499 304 0 12 chr15 77684008 77684171 -25810803 - RSINE1 SINE B4 -4 161 1 2 1177 309 284 55 34 chr15 77684173 77684319 -25810655 + L1MB7 LINE L1 6030 6178 -6 2 1177 1578 32 0 0 chr15 77684335 77684523 -25810451 + B2_Mm1a SINE B2 2 189 -4 2 1177 246 105 0 0 chr15 77684526 77684564 -25810410 + (A)n Simple_repeat Simple_repeat 1 38 0 2 1177 239 268 27 40 chr15 77684958 77685032 -25809942 + MIRc SINE MIR 24 96 -172 2 1177 561 172 0 10 chr15 77685090 77685190 -25809784 + B1_Mur1 SINE Alu 50 148 -1 2 1177 772 89 15 15 chr15 77685206 77685342 -25809632 + (GAAA)n Simple_repeat Simple_repeat 3 138 0 2 1177 257 310 45 11 chr15 77685398 77685486 -25809488 + MIRm SINE MIR 76 166 -110 2 1177 462 308 8 8 chr15 77685486 77685620 -25809354 + ID_B1 SINE B4 85 218 -6 2 1177 774 237 16 48 chr15 77686411 77686597 -25808377 + B3A SINE B2 3 182 -16 2 1177 209 320 90 38 chr15 77686623 77686756 -25808218 - MIRb SINE MIR -66 202 63 2 1177 369 327 59 88 chr15 77686995 77687334 -25807640 + L2b LINE L2 3045 3373 -2 2 1177 668 287 115 30 chr15 77687349 77687618 -25807356 + B4A SINE B4 1 292 0 2 1177 326 80 20 0 chr15 77687629 77687679 -25807295 + (CATA)n Simple_repeat Simple_repeat 4 54 0 2 1177 609 234 7 28 chr15 77687704 77687849 -25807125 + B1_Mur1 SINE Alu 6 147 -2 2 1177 210 37 0 0 chr15 77687853 77687880 -25807094 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1177 529 311 88 50 chr15 77688774 77689150 -25805824 + Lx8 LINE L1 7081 7470 -3 2 1177 2191 101 3 12 chr15 77689151 77689481 -25805493 + ORR1A4 LTR MaLR 1 327 -2 2 1177 23 0 0 0 chr15 77689584 77689607 -25805367 + AT_rich Low_complexity Low_complexity 1 23 0 2 1177 549 176 192 8 chr15 77689607 77689727 -25805247 + B1_Mus1 SINE Alu 1 142 -6 2 1177 192 302 61 20 chr15 77689827 77689925 -25805049 + MIRb SINE MIR 37 138 -130 2 1177 281 364 13 59 chr15 77690109 77690261 -25804713 + MIRm SINE MIR 1 145 -131 2 1177 1045 219 5 5 chr15 77690398 77690600 -25804374 + B3 SINE B2 15 216 0 2 1177 356 200 0 30 chr15 77690898 77690965 -25804009 + RSINE1 SINE B4 14 78 -87 2 1177 417 214 0 22 chr15 77690962 77691053 -25803921 + RSINE1 SINE B4 42 130 -35 2 1177 1247 105 10 35 chr15 77691116 77691142 -25803832 - B2_Mm2 SINE B2 0 195 176 2 1177 777 163 46 52 chr15 77691142 77691336 -25803638 - B2_Mm2 SINE B2 -1 194 2 2 1177 1247 105 10 35 chr15 77691336 77691507 -25803467 - B2_Mm2 SINE B2 -20 175 3 2 1177 489 218 216 8 chr15 77691508 77691633 -25803341 - B3A SINE B2 -46 152 2 2 1177 757 174 7 40 chr15 77691673 77691823 -25803151 + B1_Mus2 SINE Alu 2 146 -1 2 1177 314 300 0 0 chr15 77691850 77691930 -25803044 - RSINE1 SINE B4 -78 87 8 2 1177 306 297 0 0 chr15 77692245 77692309 -25802665 + ID2 SINE ID 10 73 -10 2 1177 444 37 0 0 chr15 77692310 77692364 -25802610 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1177 745 131 35 42 chr15 77692441 77692454 -25802520 - B1_Mus2 SINE Alu 0 147 138 2 1177 225 0 0 0 chr15 77692454 77692479 -25802495 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 1177 745 131 35 42 chr15 77692479 77692608 -25802366 - B1_Mus2 SINE Alu -10 137 6 2 1177 295 345 14 89 chr15 77692504 77692717 -25802257 - MT2B2 LTR ERVL -320 264 68 2 1177 352 239 86 11 chr15 77692644 77692737 -25802237 - PB1D10 SINE Alu -8 109 10 2 1177 203 276 0 0 chr15 77692749 77692807 -25802167 + (TA)n Simple_repeat Simple_repeat 2 59 0 2 1177 804 114 122 0 chr15 77692889 77693020 -25801954 - B1_Mus1 SINE Alu 0 148 2 2 1177 409 261 83 21 chr15 77693063 77693208 -25801766 + RSINE1 SINE B4 5 158 -7 2 1177 1299 216 54 113 chr15 77693878 77693990 -25800984 - MTD LTR MaLR -1 418 300 2 1177 1137 68 0 0 chr15 77693990 77694137 -25800837 + B1_Mus2 SINE Alu 1 147 0 2 1177 1299 216 54 113 chr15 77694137 77694468 -25800506 - MTD LTR MaLR -120 299 1 2 1177 311 211 31 72 chr15 77695023 77695120 -25799854 + L1MB2 LINE L1 5855 5947 -224 2 1177 284 226 94 12 chr15 77695125 77695210 -25799764 + PB1D7 SINE Alu 29 120 0 2 1177 261 296 98 11 chr15 77695225 77695399 -25799575 + L1MB2 LINE L1 5950 6138 -45 2 1177 2948 54 0 13 chr15 77695414 77695806 -25799168 + L1Md_F2 LINE L1 6196 6582 0 2 1177 697 280 49 84 chr15 77695902 77696128 -25798846 - ID_B1 SINE B4 0 224 7 2 1177 212 304 0 0 chr15 77696208 77696264 -25798710 + B4A SINE B4 89 144 -148 2 1177 956 86 184 0 chr15 77696281 77696433 -25798541 + B2_Mm2 SINE B2 2 181 -14 2 1177 190 364 27 9 chr15 77696532 77696643 -25798331 + MIR SINE MIR 54 166 -96 2 1177 223 119 0 125 chr15 77697702 77697750 -25797224 + C-rich Low_complexity Low_complexity 1 42 0 2 1177 398 205 152 64 chr15 77697750 77697875 -25797099 - B1F2 SINE Alu -13 136 1 2 1177 294 115 0 0 chr15 77697888 77697940 -25797034 + (T)n Simple_repeat Simple_repeat 1 52 0 2 1177 1148 68 0 0 chr15 77697940 77698087 -25796887 - B1_Mus1 SINE Alu 0 148 2 2 1177 1363 93 0 5 chr15 77698094 77698288 -25796686 - B2_Mm2 SINE B2 0 195 3 2 1177 548 158 0 88 chr15 77698293 77698418 -25796556 - B1_Mus1 SINE Alu 0 148 35 2 1177 634 264 0 0 chr15 77698439 77698583 -25796391 + RSINE1 SINE B4 1 144 -21 2 1177 334 233 41 0 chr15 77698585 77698658 -25796316 - B3A SINE B2 -122 76 1 2 1177 620 106 41 74 chr15 77698687 77698809 -25796165 - B1_Mur3 SINE Alu -6 143 26 2 1177 427 268 106 114 chr15 77698970 77699123 -25795851 + B4A SINE B4 51 214 -78 2 1177 1246 95 26 0 chr15 77699123 77699312 -25795662 - B2_Mm2 SINE B2 0 195 2 2 1177 427 268 106 114 chr15 77699312 77699394 -25795580 + B4A SINE B4 215 284 -8 2 1177 333 0 0 0 chr15 77699402 77699439 -25795535 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1177 3370 20 2 0 chr15 77699443 77699838 -25795136 + MTA_Mm LTR MaLR 1 396 0 2 1177 8538 53 1 2 chr15 77699838 77700936 -25794038 + MTA_Mm-int LTR MaLR 1 1097 -1 2 1177 3270 25 2 37 chr15 77700937 77701304 -25793670 + MTA_Mm LTR MaLR 1 367 -29 2 1177 1516 42 5 0 chr15 77701304 77701495 -25793479 - B2_Mm1t SINE B2 0 193 2 3 1177 3270 25 2 37 chr15 77701495 77701537 -25793437 + MTA_Mm LTR MaLR 368 396 0 2 1177 1231 96 43 0 chr15 77701757 77701944 -25793030 + B2_Mm2 SINE B2 1 195 0 3 1177 397 207 11 203 chr15 77703225 77703279 -25791695 - MTE2b LTR MaLR -2 377 330 3 1177 532 197 113 8 chr15 77703279 77703412 -25791562 + B1_Mus1 SINE Alu 2 148 0 3 1177 315 0 0 0 chr15 77703414 77703449 -25791525 + (ATTG)n Simple_repeat Simple_repeat 3 37 0 3 1177 397 207 11 203 chr15 77703449 77703573 -25791401 - MTE2b LTR MaLR -50 329 231 3 1177 2052 91 14 102 chr15 77703628 77703858 -25791116 - ORR1A2 LTR MaLR 0 327 108 3 1177 1088 88 0 20 chr15 77703858 77704008 -25790966 - B1_Mus2 SINE Alu 0 147 1 3 1177 2052 91 14 102 chr15 77704008 77704131 -25790843 - ORR1A2 LTR MaLR -220 107 5 3 1177 210 143 0 0 chr15 77704357 77704392 -25790582 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1177 594 306 71 32 chr15 77704482 77704762 -25790212 - B4A SINE B4 0 292 2 3 1177 180 0 0 0 chr15 77705749 77705769 -25789205 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 3 1177 413 104 0 0 chr15 77705769 77705838 -25789136 - L1Md_F3 LINE L1 -8 6576 6508 3 1177 1281 104 5 20 chr15 77705879 77706075 -25788899 + B2_Mm2 SINE B2 3 195 0 3 1177 906 129 7 13 chr15 77706096 77706245 -25788729 + B1_Mur3 SINE Alu 2 149 0 3 1177 1085 61 0 7 chr15 77706297 77706445 -25788529 + B1_Mus2 SINE Alu 1 147 0 3 1177 1122 75 0 0 chr15 77706817 77706964 -25788010 - B1_Mm SINE Alu 0 147 1 3 1177 253 339 17 17 chr15 77707314 77707434 -25787540 + L2b LINE L2 3253 3372 -3 3 1177 553 80 23 0 chr15 77707620 77707708 -25787266 + (GA)n Simple_repeat Simple_repeat 1 90 0 3 1177 298 306 90 122 chr15 77708009 77708268 -25786706 + MLT1E LTR MaLR 210 588 -65 3 1177 3346 15 8 0 chr15 77708268 77708661 -25786313 - MTA_Mm LTR MaLR 0 396 1 3 1177 298 300 56 155 chr15 77708661 77708714 -25786260 + MLT1E LTR MaLR 589 638 -15 3 1177 370 341 36 41 chr15 77708838 77709058 -25785916 + MLT1K LTR MaLR 20 238 -357 3 1177 635 176 249 17 chr15 77709383 77709556 -25785418 - ORR1A4 LTR MaLR -3 416 204 3 1177 204 40 0 0 chr15 77710028 77710053 -25784921 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 3 1177 4423 170 29 21 chr15 77710054 77710873 -25784101 - RMER1B Other Other -233 833 8 3 1177 319 227 93 0 chr15 77710906 77710981 -25783993 - ID4_ SINE ID -1 82 1 3 1177 324 224 0 0 chr15 77711053 77711120 -25783854 + B3 SINE B2 41 107 -109 3 1177 1022 155 11 5 chr15 77711142 77711330 -25783644 + URR1A DNA MER1_type 38 226 0 3 1177 382 198 19 133 chr15 77711348 77711453 -25783521 + B3 SINE B2 122 214 -2 3 1177 312 182 18 0 chr15 77711469 77711524 -25783450 - PB1D10 SINE Alu -50 67 12 3 1177 266 197 115 0 chr15 77711473 77711534 -25783440 - B4A SINE B4 -144 148 81 3 1177 928 155 77 6 chr15 77711537 77711560 -25783414 - B2_Mm2 SINE B2 0 195 173 3 1177 258 32 0 0 chr15 77711560 77711591 -25783383 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1177 429 20 0 0 chr15 77711591 77711640 -25783334 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 1177 928 155 77 6 chr15 77711640 77711797 -25783177 - B2_Mm2 SINE B2 -23 172 2 3 1177 1120 128 98 0 chr15 77711990 77712194 -25782780 - ORR1A4 LTR MaLR -105 224 1 3 1177 242 361 25 0 chr15 77712197 77712319 -25782655 + MIRc SINE MIR 112 236 -32 3 1177 270 226 26 12 chr15 77712944 77713028 -25781946 + MIR SINE MIR 35 120 -148 3 1177 193 0 61 30 chr15 77713711 77713744 -25781230 + (GGGTG)n Simple_repeat Simple_repeat 3 36 0 3 1177 230 277 48 12 chr15 77714614 77714698 -25780276 - MLT1D LTR MaLR -366 139 53 3 1177 1056 56 21 0 chr15 77714723 77714866 -25780108 + B1_Mus1 SINE Alu 3 148 0 3 1177 1299 79 0 0 chr15 77714872 77715049 -25779925 + (GGA)n Simple_repeat Simple_repeat 2 178 0 3 1177 915 206 0 88 chr15 77715049 77715310 -25779664 - RMER17C LTR ERVK -17 393 156 3 1177 746 250 33 65 chr15 77715292 77715506 -25779468 - ID_B1 SINE B4 -17 207 1 3 1177 188 238 48 0 chr15 77715619 77715661 -25779313 + MIRm SINE MIR 35 78 -198 3 1177 333 148 0 0 chr15 77715965 77716019 -25778955 - MIRc SINE MIR -140 128 75 3 1177 1408 58 27 0 chr15 77716199 77716387 -25778587 + B2_Mm2 SINE B2 1 193 -2 3 1177 480 165 0 0 chr15 77716745 77716836 -25778138 + (CA)n Simple_repeat Simple_repeat 1 91 0 3 1177 753 203 0 7 chr15 77716877 77717021 -25777953 + B1_Mus2 SINE Alu 5 147 0 3 1177 826 60 0 17 chr15 77717089 77717208 -25777766 + (GGA)n Simple_repeat Simple_repeat 3 119 0 3 1177 238 247 19 102 chr15 77717371 77717479 -25777495 + MER53 DNA hAT 85 183 -10 3 1177 180 152 0 0 chr15 77717479 77717512 -25777462 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 3 1177 239 215 36 60 chr15 77717512 77717596 -25777378 - ID4_ SINE ID -1 82 1 3 1177 639 226 94 30 chr15 77718034 77718163 -25776811 - B3 SINE B2 -2 214 72 3 1177 297 0 0 0 chr15 77718163 77718196 -25776778 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1177 639 226 94 30 chr15 77718196 77718267 -25776707 - B3 SINE B2 -145 71 1 3 1177 648 0 0 0 chr15 77718571 77718643 -25776331 + (TAGA)n Simple_repeat Simple_repeat 3 74 0 3 1177 222 37 0 0 chr15 77718716 77718743 -25776231 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 3 1177 1185 35 0 0 chr15 77719237 77719379 -25775595 - B1_Mus2 SINE Alu -5 142 1 3 1177 472 170 172 86 chr15 77719680 77719854 -25775120 - B2_Mm2 SINE B2 -6 189 1 3 1177 534 142 0 34 chr15 77719858 77719975 -25774999 + CT-rich Low_complexity Low_complexity 2 114 0 3 1177 566 242 98 0 chr15 77719984 77720116 -25774858 - B1_Mur2 SINE Alu 0 149 5 3 1177 180 274 90 74 chr15 77720158 77720280 -25774694 - MIRm SINE MIR -148 128 5 3 1177 225 83 0 0 chr15 77720906 77720942 -25774032 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1177 288 0 0 0 chr15 77721011 77721043 -25773931 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1177 454 258 16 32 chr15 77721243 77721367 -25773607 + ID_B1 SINE B4 77 198 -26 3 1177 260 238 72 10 chr15 77721402 77721496 -25773478 + B1F2 SINE Alu 9 108 -41 3 1177 1329 111 4 74 chr15 77722055 77722298 -25772676 + URR1A DNA MER1_type 1 226 0 3 1177 894 295 56 61 chr15 77722509 77722646 -25772328 + MLT1A LTR MaLR 1 138 -236 3 1177 888 162 199 11 chr15 77722646 77722827 -25772147 - B3 SINE B2 -1 215 1 3 1177 894 295 56 61 chr15 77722827 77723065 -25771909 + MLT1A LTR MaLR 139 374 0 3 1177 341 250 38 0 chr15 77723124 77723204 -25771770 + RSINE1 SINE B4 45 127 -38 3 1177 1259 48 0 0 chr15 77723364 77723511 -25771463 + B1_Mus1 SINE Alu 1 147 -1 3 1177 279 305 48 34 chr15 77723658 77723804 -25771170 - MER117 DNA MER1_type -49 148 1 3 1177 219 327 0 0 chr15 77724072 77724141 -25770833 + BC1_Mm scRNA scRNA 13 81 -2 3 1177 199 177 0 48 chr15 77724170 77724253 -25770721 + (CAGA)n Simple_repeat Simple_repeat 2 80 0 3 1177 428 235 0 0 chr15 77724298 77724379 -25770595 + RSINE1 SINE B4 43 123 -42 3 1177 487 250 2 2 chr15 77724442 77724586 -25770388 + B1F1 SINE Alu 2 145 -4 3 1177 266 319 31 31 chr15 77725178 77725275 -25769699 + MIR3 SINE MIR 98 194 -14 3 147 2213 112 51 14 chr15 77725636 77725990 -25768984 - IAPLTR1_Mm LTR ERVK 0 367 1 3 1178 53587 30 7 2 chr15 77725994 77732433 -25762541 - IAPEz-int LTR ERVK -3 6478 8 3 1178 2213 112 51 14 chr15 77732433 77732787 -25762187 - IAPLTR1_Mm LTR ERVK 0 367 1 3 1178 483 92 89 0 chr15 77732916 77733006 -25761968 - PB1D9 SINE Alu 0 120 33 3 1178 461 282 16 0 chr15 77733009 77733133 -25761841 - B1F SINE Alu -20 129 4 3 1178 236 340 0 109 chr15 77733031 77733150 -25761824 - MT2B2 LTR ERVL -325 259 154 3 1178 963 212 42 24 chr15 77733157 77733369 -25761605 - ID_B1 SINE B4 -8 216 1 3 1178 556 277 68 0 chr15 77733427 77733575 -25761399 - RSINE1 SINE B4 -6 159 2 3 1178 279 0 0 0 chr15 77734091 77734122 -25760852 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1178 333 321 25 80 chr15 77734129 77734329 -25760645 - ID_B1 SINE B4 -19 205 17 3 1178 309 257 116 27 chr15 77735200 77735312 -25759662 + ID_B1 SINE B4 103 224 0 3 1178 639 113 0 10 chr15 77735487 77735585 -25759389 + B3A SINE B2 1 97 -101 3 1178 313 147 173 0 chr15 77736445 77736520 -25758454 - B1_Mur3 SINE Alu 0 149 62 3 1178 626 174 81 29 chr15 77736559 77736695 -25758279 - B1_Mur2 SINE Alu 0 149 7 3 1178 509 308 19 6 chr15 77738845 77739002 -25755972 + MLT1B LTR MaLR 12 170 -220 3 1178 361 221 73 46 chr15 77739014 77739123 -25755851 + PB1D10 SINE Alu 4 115 -2 3 1178 429 227 43 52 chr15 77739127 77739243 -25755731 + PB1D7 SINE Alu 6 120 0 3 1178 433 315 45 36 chr15 77739260 77739484 -25755490 + B4A SINE B4 17 242 -50 3 1178 1222 54 0 0 chr15 77739644 77739791 -25755183 - B1_Mus1 SINE Alu -1 147 1 3 1178 278 106 21 0 chr15 77740040 77740087 -25754887 + (GA)n Simple_repeat Simple_repeat 2 49 0 3 1178 328 209 42 95 chr15 77740087 77740182 -25754792 + MT2B LTR ERVL 168 257 -344 3 1178 504 205 128 0 chr15 77740100 77740217 -25754757 + B1_Mur2 SINE Alu 17 148 -1 3 1178 1560 51 0 25 chr15 77740222 77740422 -25754552 + B2_Mm2 SINE B2 1 195 0 3 1178 275 360 0 26 chr15 77740476 77740593 -25754381 + MLT1B LTR MaLR 164 277 -113 3 1178 425 181 11 0 chr15 77740960 77741054 -25753920 + T-rich Low_complexity Low_complexity 3 97 0 3 1178 1173 75 7 0 chr15 77741054 77741200 -25753774 - B1_Mus1 SINE Alu 0 148 2 3 1178 750 147 36 29 chr15 77741204 77741344 -25753630 - B1_Mus1 SINE Alu 0 148 8 3 1178 409 258 37 68 chr15 77741344 77741364 -25753610 - ID_B1 SINE B4 0 222 68 3 1178 194 357 0 0 chr15 77741415 77741471 -25753503 + MIRm SINE MIR 114 169 -107 3 1178 285 146 0 0 chr15 77741882 77741930 -25753044 + (TCC)n Simple_repeat Simple_repeat 2 49 0 3 1178 213 200 50 0 chr15 77741930 77741990 -25752984 + (TCTA)n Simple_repeat Simple_repeat 2 64 0 3 1178 327 250 56 0 chr15 77743435 77743507 -25751467 + PB1D7 SINE Alu 4 79 -41 4 1178 291 335 120 7 chr15 77743844 77743994 -25750980 + MIRb SINE MIR 53 219 -49 4 1178 1262 111 6 11 chr15 77744160 77744343 -25750631 - B2_Mm1t SINE B2 -10 183 2 4 1178 948 206 85 0 chr15 77744362 77744561 -25750413 + ID_B1 SINE B4 1 216 -8 4 1178 459 0 0 0 chr15 77746499 77746550 -25748424 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1178 1549 62 10 0 chr15 77747042 77747234 -25747740 + B2_Mm2 SINE B2 1 194 -1 4 1178 198 0 0 0 chr15 77747538 77747560 -25747414 + (ATTTG)n Simple_repeat Simple_repeat 2 23 0 4 1178 654 140 122 0 chr15 77747950 77748057 -25746917 - PB1D9 SINE Alu 0 120 1 4 1178 372 247 12 0 chr15 77748085 77748166 -25746808 + ID4_ SINE ID 2 83 0 4 1178 1142 67 37 0 chr15 77748527 77748691 -25746283 + B2_Mm1t SINE B2 14 183 -10 4 1178 691 168 32 0 chr15 77749303 77749428 -25745546 + B1_Mur4 SINE Alu 21 149 -1 4 1178 445 281 26 0 chr15 77749450 77749564 -25745410 + RSINE1 SINE B4 1 117 -48 4 1178 641 257 145 14 chr15 77749579 77749800 -25745174 + B4A SINE B4 1 250 -42 4 1178 489 76 0 0 chr15 77749839 77749905 -25745069 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 1178 234 336 43 26 chr15 77750031 77750147 -25744827 + B4 SINE B4 54 171 -121 4 1178 392 309 52 0 chr15 77750318 77750454 -25744520 + RSINE1 SINE B4 4 146 -19 4 1178 183 232 0 0 chr15 77750747 77750803 -25744171 + A-rich Low_complexity Low_complexity 1 56 0 4 1178 1622 32 0 21 chr15 77751927 77752118 -25742856 + B2_Mm1a SINE B2 2 188 -5 4 1178 198 0 0 0 chr15 77752930 77752952 -25742022 + (CCCCCA)n Simple_repeat Simple_repeat 6 27 0 4 1178 211 306 139 0 chr15 77752961 77753069 -25741905 + L2a LINE L2 3029 3151 -275 4 1178 382 311 66 0 chr15 77753084 77753206 -25741768 + ID_B1 SINE B4 87 216 -8 4 1178 212 319 15 98 chr15 77753662 77753683 -25741291 - B3 SINE B2 0 216 201 4 1178 715 201 72 0 chr15 77753683 77753822 -25741152 - B1_Mur4 SINE Alu -1 149 1 4 1178 396 202 72 21 chr15 77753822 77753997 -25740977 - B3 SINE B2 -16 200 1 4 1178 856 230 44 10 chr15 77754048 77754254 -25740720 - B3 SINE B2 -3 213 1 4 1178 426 288 36 0 chr15 77754680 77754791 -25740183 + PB1D10 SINE Alu 1 115 -2 4 1178 374 279 84 15 chr15 77755373 77755504 -25739470 + MTE2a LTR MaLR 45 184 -195 4 1178 231 348 53 32 chr15 77755525 77755620 -25739354 + RSINE1 SINE B4 69 165 0 4 1178 654 214 167 11 chr15 77755657 77755837 -25739137 + MTE2a LTR MaLR 172 379 0 4 1178 233 220 14 63 chr15 77755838 77755912 -25739062 + B1F SINE Alu 48 149 0 4 1178 548 246 17 0 chr15 77755990 77756108 -25738866 - B1_Mur1 SINE Alu -3 146 27 4 1178 25 0 0 0 chr15 77756139 77756164 -25738810 + AT_rich Low_complexity Low_complexity 1 25 0 4 1178 1436 39 55 0 chr15 77756174 77756356 -25738618 - B2_Mm1a SINE B2 0 193 2 4 1178 1016 111 15 0 chr15 77756356 77756490 -25738484 - B1_Mus1 SINE Alu -11 137 1 4 1178 765 181 24 12 chr15 77756506 77756680 -25738294 - B3 SINE B2 -7 188 3 4 1178 672 73 0 27 chr15 77756708 77756820 -25738154 - B2_Mm1a SINE B2 0 193 85 4 1178 1488 69 21 0 chr15 77756822 77757011 -25737963 - B2_Mm2 SINE B2 -2 193 1 4 1178 399 258 21 0 chr15 77757345 77757438 -25737536 + PB1D10 SINE Alu 13 107 -10 4 1178 353 240 48 9 chr15 77758534 77758639 -25736335 + PB1D10 SINE Alu 2 110 -7 4 1178 209 288 55 0 chr15 77758919 77758992 -25735982 - MIRb SINE MIR -146 122 46 4 1178 507 230 267 0 chr15 77759776 77759941 -25735033 + ID_B1 SINE B4 2 210 -14 4 1178 273 257 65 56 chr15 77760402 77760509 -25734465 + L2a LINE L2 3315 3422 -4 4 1178 1321 67 84 0 chr15 77760811 77760990 -25733984 - B2_Mm2 SINE B2 0 195 2 4 1178 367 306 22 7 chr15 77760990 77761125 -25733849 + CT-rich Low_complexity Low_complexity 2 138 0 4 1178 351 0 0 0 chr15 77761241 77761280 -25733694 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1178 2628 189 12 24 chr15 77761280 77761783 -25733191 - RLTR18B LTR ERVK -15 497 1 4 1178 236 162 0 0 chr15 77762535 77762572 -25732402 + B1_Mus2 SINE Alu 12 48 -99 4 1178 966 187 112 5 chr15 77762842 77763030 -25731944 - B3 SINE B2 -7 209 2 4 1178 631 226 20 27 chr15 77763059 77763209 -25731765 + B1_Mur1 SINE Alu 1 149 0 4 1178 405 107 60 0 chr15 77763216 77763300 -25731674 + GA-rich Low_complexity Low_complexity 2 90 0 4 1178 1223 134 5 5 chr15 77763323 77763510 -25731464 + B2_Mm1t SINE B2 2 188 -5 4 1178 391 101 353 29 chr15 77763547 77763649 -25731325 + B2_Mm2 SINE B2 47 181 -14 4 1178 891 227 124 0 chr15 77763695 77763889 -25731085 + ID_B1 SINE B4 7 224 0 4 1178 435 217 0 11 chr15 77764635 77764728 -25730246 - PB1D9 SINE Alu -7 113 22 4 1178 281 283 63 32 chr15 77765298 77765393 -25729581 - PB1D9 SINE Alu -9 111 14 4 1178 189 0 0 0 chr15 77766441 77766462 -25728512 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1178 682 293 13 0 chr15 77766716 77766873 -25728101 + RSINE1 SINE B4 3 161 -4 4 1178 815 248 66 26 chr15 77767103 77767331 -25727643 + MTEa LTR MaLR 82 318 -61 4 1178 1221 55 0 0 chr15 77767367 77767512 -25727462 + B1_Mus1 SINE Alu 2 146 -2 4 1178 214 186 0 0 chr15 77767513 77767556 -25727418 + A-rich Low_complexity Low_complexity 1 43 0 4 1178 1244 73 28 0 chr15 77767573 77767751 -25727223 - B2_Mm2 SINE B2 -7 188 6 4 1178 2343 203 89 151 chr15 77768060 77768562 -25726412 + RLTR40 LTR ERVK 1 554 -263 4 1178 1261 48 0 0 chr15 77768562 77768709 -25726265 + B1_Mm SINE Alu 1 147 0 4 1178 2343 203 89 151 chr15 77768709 77769060 -25725914 + RLTR40 LTR ERVK 555 801 -16 4 1178 2496 150 5 0 chr15 77769170 77769549 -25725425 - RLTR14 LTR ERV1 -1 381 1 4 1178 279 238 32 0 chr15 77769550 77769613 -25725361 - ID_B1 SINE B4 -9 215 151 4 1178 644 289 67 24 chr15 77769676 77769885 -25725089 - ID_B1 SINE B4 0 224 7 4 1178 560 236 23 45 chr15 77770173 77770306 -25724668 - B1_Mur1 SINE Alu -1 148 19 4 1178 783 175 89 73 chr15 77770314 77770505 -25724469 + B2_Mm2 SINE B2 1 194 -1 4 1178 1214 48 7 0 chr15 77770515 77770661 -25724313 + B1_Mus2 SINE Alu 1 147 0 4 1178 272 271 43 77 chr15 77770671 77770686 -25724288 - PB1D7 SINE Alu -13 107 54 4 1178 356 171 0 91 chr15 77770686 77770763 -25724211 - ID_B1 SINE B4 -55 169 100 4 1178 234 0 0 0 chr15 77771281 77771307 -25723667 + (ATTG)n Simple_repeat Simple_repeat 4 29 0 4 1178 520 295 23 8 chr15 77771307 77771440 -25723534 - B1_Mur1 SINE Alu -14 135 1 4 1178 446 252 89 8 chr15 77771457 77771581 -25723393 - B1F1 SINE Alu -4 145 12 4 1178 705 212 23 41 chr15 77771652 77771824 -25723150 + B3A SINE B2 30 198 0 4 1178 272 333 43 9 chr15 77771826 77771941 -25723033 + B4 SINE B4 80 198 -94 4 1178 534 213 11 0 chr15 77771844 77771957 -25723017 + B1F SINE Alu 13 135 -15 4 1178 271 218 0 0 chr15 77774044 77774099 -25720875 + MTC LTR MaLR 2 56 -365 4 1178 230 0 0 32 chr15 77774103 77774134 -25720840 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 4 1178 1249 48 0 0 chr15 77774134 77774279 -25720695 - B1_Mm SINE Alu -2 145 1 4 1178 680 186 23 23 chr15 77774279 77774411 -25720563 - B1_Mur2 SINE Alu -1 148 17 4 1178 1167 215 135 29 chr15 77774400 77774749 -25720225 + MTC LTR MaLR 36 421 0 4 1178 420 320 177 23 chr15 77774755 77775158 -25719816 + Tigger7 DNA MER2_type 304 768 -1723 4 1178 351 282 114 93 chr15 77775660 77775906 -25719068 - L1MEg LINE L1 -5104 980 730 4 1178 377 241 30 1 chr15 77776661 77776772 -25718202 - B1F SINE Alu -21 128 14 4 1178 263 285 48 19 chr15 77776875 77777041 -25717933 - MIR SINE MIR -98 178 1 4 1178 666 264 0 25 chr15 77777041 77777204 -25717770 - RSINE1 SINE B4 -4 161 3 4 1178 259 297 77 29 chr15 77778500 77778604 -25716370 - MIR SINE MIR -112 150 42 4 1178 313 195 5 87 chr15 77779076 77779261 -25715713 + (TA)n Simple_repeat Simple_repeat 1 170 0 4 1178 282 318 0 0 chr15 77779937 77780003 -25714971 - tRNA-Ala-GCA tRNA tRNA -7 68 3 4 1178 313 136 34 0 chr15 77780009 77780068 -25714906 - ID_B1 SINE B4 0 224 164 4 1178 231 260 113 10 chr15 77780068 77780106 -25714868 - PB1D7 SINE Alu 0 120 14 4 1178 514 268 39 16 chr15 77780563 77780692 -25714282 + RSINE1 SINE B4 4 135 -30 4 1178 374 188 12 59 chr15 77780849 77780934 -25714040 + PB1D10 SINE Alu 1 81 -36 4 1178 237 219 44 99 chr15 77780856 77780947 -25714027 + 4.5SRNA scRNA scRNA 7 92 -2 4 1178 620 222 36 36 chr15 77781338 77781478 -25713496 + RSINE1 SINE B4 5 144 -21 4 1178 286 346 29 106 chr15 77781478 77781545 -25713429 + B3A SINE B2 4 194 -4 4 1178 195 42 0 0 chr15 77781829 77781853 -25713121 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 4 1178 1220 36 0 0 chr15 77782168 77782306 -25712668 + B1_Mm SINE Alu 2 139 -8 4 1178 685 275 18 53 chr15 77783145 77783358 -25711616 - ID_B1 SINE B4 -39 253 44 4 1178 486 257 0 26 chr15 77784518 77784634 -25710340 - PB1D10 SINE Alu -4 113 1 4 1178 597 288 24 12 chr15 77785283 77785448 -25709526 - RMER30 DNA MER1_type -1 201 35 4 1178 1190 63 0 0 chr15 77785456 77785598 -25709376 + B1_Mus1 SINE Alu 2 143 -5 4 1178 531 194 0 0 chr15 77785601 77785709 -25709265 + GA-rich Low_complexity Low_complexity 2 109 0 4 1178 274 261 15 0 chr15 77787618 77787683 -25707291 + B1F SINE Alu 7 72 -77 5 1178 701 209 91 109 chr15 77788891 77788982 -25705992 - URR1B DNA MER1_type -9 216 129 5 1178 1171 42 28 0 chr15 77788982 77789126 -25705848 - B1_Mus1 SINE Alu 0 148 1 5 1178 701 209 91 109 chr15 77789126 77789254 -25705720 - URR1B DNA MER1_type -97 128 1 5 1178 267 114 0 0 chr15 77789943 77789987 -25704987 + (TCC)n Simple_repeat Simple_repeat 2 45 0 5 1178 445 321 138 18 chr15 77791081 77791357 -25703617 + MLT1E3 LTR MaLR 348 656 -24 5 1178 246 192 0 0 chr15 77793397 77793449 -25701525 + GA-rich Low_complexity Low_complexity 1 52 0 5 1178 421 312 90 11 chr15 77794194 77794382 -25700592 + MER2 DNA MER2_type 143 345 0 5 1178 306 298 43 0 chr15 77794680 77794774 -25700200 + PB1D10 SINE Alu 14 111 -6 5 1178 184 178 22 22 chr15 77794974 77795020 -25699954 + MIRc SINE MIR 52 97 -171 5 1178 875 208 16 11 chr15 77795544 77795734 -25699240 - B2_Mm2 SINE B2 -2 193 3 5 1178 351 256 69 55 chr15 77797960 77798105 -25696869 + MER5A1 DNA MER1_type 13 159 -7 5 1178 201 346 123 19 chr15 77799835 77799941 -25695033 - MIR SINE MIR -33 229 113 5 1178 180 0 0 0 chr15 77801345 77801365 -25693609 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1178 246 81 0 0 chr15 77802689 77802726 -25692248 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1178 356 288 78 31 chr15 77802900 77803029 -25691945 + B1F SINE Alu 15 149 0 5 1178 704 206 103 0 chr15 77803424 77803570 -25691404 + ID_B1 SINE B4 54 214 -10 5 1178 441 0 0 0 chr15 77803766 77803815 -25691159 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 5 1178 609 261 0 21 chr15 77803815 77803956 -25691018 - B1_Mur1 SINE Alu -11 138 1 5 1178 728 247 176 0 chr15 77804143 77804325 -25690649 + B3 SINE B2 1 214 -2 5 1178 190 300 50 0 chr15 77804462 77804522 -25690452 + L2a LINE L2 3363 3425 -1 5 1178 255 296 201 16 chr15 77804827 77805016 -25689958 - MIRb SINE MIR -11 257 34 5 1178 456 210 2 25 chr15 77805243 77805361 -25689613 - PB1D10 SINE Alu -36 111 1 5 1178 762 113 0 0 chr15 77805735 77805850 -25689124 + (TTTC)n Simple_repeat Simple_repeat 4 118 0 5 1178 253 208 19 0 chr15 77805854 77805907 -25689067 + CT-rich Low_complexity Low_complexity 1 54 0 5 1178 1555 58 16 0 chr15 77805907 77806098 -25688876 - B2_Mm2 SINE B2 0 195 2 5 1178 430 295 62 52 chr15 77806522 77806733 -25688241 + RMER15 LTR ERVL 363 575 0 5 1178 268 291 29 93 chr15 77806972 77807112 -25687862 - MLT1G LTR MaLR -10 479 349 5 1178 274 293 213 37 chr15 77807196 77807384 -25687590 - MLT1G LTR MaLR -310 281 61 5 1178 1222 276 55 30 chr15 77807391 77807570 -25687404 + MTE2a LTR MaLR 2 194 -185 5 1178 3169 17 0 0 chr15 77807570 77807916 -25687058 - ORR1A0 LTR MaLR 0 346 1 5 1178 1222 276 55 30 chr15 77807916 77808102 -25686872 + MTE2a LTR MaLR 195 375 -4 5 1178 504 284 150 23 chr15 77808343 77808563 -25686411 + MTE2b LTR MaLR 1 248 -131 5 1178 257 241 100 33 chr15 77809089 77809179 -25685795 - MIRc SINE MIR -124 144 49 5 1178 225 0 0 0 chr15 77809333 77809358 -25685616 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 1178 775 211 0 13 chr15 77809489 77809638 -25685336 + RSINE1 SINE B4 3 149 -16 5 1178 429 66 0 0 chr15 77809641 77809702 -25685272 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1178 193 331 145 24 chr15 77810625 77810749 -25684225 + MIRb SINE MIR 50 188 -80 5 1178 386 300 0 0 chr15 77810978 77811058 -25683916 - ID4 SINE ID 0 83 4 5 1178 523 221 7 99 chr15 77811149 77811290 -25683684 - B1_Mur4 SINE Alu -20 130 3 5 1178 223 337 38 19 chr15 77811766 77811872 -25683102 + MIRc SINE MIR 36 143 -125 5 1178 261 0 0 0 chr15 77812079 77812108 -25682866 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1178 409 292 9 0 chr15 77812293 77812399 -25682575 - PB1D7 SINE Alu -1 119 13 5 1178 530 254 58 69 chr15 77812458 77812631 -25682343 + ID_B1 SINE B4 84 257 -35 5 1178 227 329 35 12 chr15 77813500 77813586 -25681388 - L2c LINE L2 0 3387 3300 5 1178 1030 86 65 0 chr15 77813670 77813809 -25681165 - B1_Mus1 SINE Alu 0 148 1 5 1178 753 73 16 24 chr15 77814092 77814219 -25680755 + (TAGA)n Simple_repeat Simple_repeat 4 129 0 5 1178 450 0 0 0 chr15 77814287 77814337 -25680637 + (GGA)n Simple_repeat Simple_repeat 2 51 0 5 1178 240 315 17 7 chr15 77814604 77814707 -25680267 + MIR SINE MIR 82 190 -78 5 1178 1146 158 0 0 chr15 77815505 77815783 -25679191 + (TCCA)n Simple_repeat Simple_repeat 1 278 0 5 1178 279 79 0 0 chr15 77815785 77815823 -25679151 + (TCTA)n Simple_repeat Simple_repeat 3 40 0 5 1178 208 332 150 14 chr15 77816264 77816429 -25678545 + MIRb SINE MIR 44 234 -34 5 1178 204 97 0 0 chr15 77816464 77816495 -25678479 + (TCCC)n Simple_repeat Simple_repeat 2 32 0 5 1178 498 302 154 0 chr15 77816523 77816672 -25678302 - ID_B1 SINE B4 -52 172 1 5 1178 180 0 0 0 chr15 77816906 77816926 -25678048 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1178 1279 41 0 0 chr15 77816926 77817073 -25677901 - B1_Mus2 SINE Alu 0 147 1 5 1178 242 306 0 0 chr15 77817180 77817242 -25677732 + L4 LINE RTE 1755 1816 -213 5 1178 228 170 43 0 chr15 77817546 77817593 -25677381 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1178 588 272 88 128 chr15 77817601 77817806 -25677168 - B4A SINE B4 -1 291 86 5 1178 686 217 131 11 chr15 77817806 77817997 -25676977 - B3 SINE B2 -2 214 1 5 1178 588 272 88 128 chr15 77817997 77818065 -25676909 - B4A SINE B4 -207 85 29 5 1178 366 234 13 0 chr15 77818226 77818303 -25676671 - PB1D10 SINE Alu -32 85 8 5 1178 824 157 64 7 chr15 77818429 77818570 -25676404 - B1_Mur4 SINE Alu 0 150 2 5 1178 282 29 0 0 chr15 77818776 77818811 -25676163 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1178 315 301 86 53 chr15 77818857 77819008 -25675966 - MER63B DNA AcHobo -6 430 275 5 1178 477 246 199 6 chr15 77819617 77819793 -25675181 + ID_B1 SINE B4 8 217 -7 5 1178 354 23 0 0 chr15 77819793 77819836 -25675138 + (CAGA)n Simple_repeat Simple_repeat 4 46 0 5 1178 280 318 92 13 chr15 77820216 77820369 -25674605 + MER115 DNA Tip100 507 671 -22 5 1178 223 318 23 12 chr15 77820692 77820778 -25674196 + RSINE1 SINE B4 3 89 -76 5 1178 253 246 0 68 chr15 77821050 77821124 -25673850 + BC1_Mm scRNA scRNA 14 82 -70 5 1178 243 322 11 44 chr15 77821124 77821135 -25673839 + B4 SINE B4 33 95 -197 5 1178 771 11 0 0 chr15 77821183 77821271 -25673703 + (TCTCC)n Simple_repeat Simple_repeat 3 90 0 5 1178 988 137 14 0 chr15 77821271 77821417 -25673557 - B1_Mur4 SINE Alu -2 148 1 5 1178 189 308 0 15 chr15 77821959 77822025 -25672949 + L3 LINE CR1 4304 4368 -121 5 1178 240 111 0 0 chr15 77822332 77822377 -25672597 + (T)n Simple_repeat Simple_repeat 1 45 0 5 1178 459 0 0 0 chr15 77823397 77823448 -25671526 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1178 342 0 0 0 chr15 77823448 77823485 -25671489 + (GA)n Simple_repeat Simple_repeat 1 38 0 5 1178 200 227 121 33 chr15 77823562 77823653 -25671321 - MIR3 SINE MIR -1 207 109 5 1178 211 176 0 38 chr15 77824036 77824089 -25670885 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 5 1178 26 30 0 0 chr15 77824247 77824280 -25670694 + AT_rich Low_complexity Low_complexity 1 33 0 5 1178 39 0 0 0 chr15 77824989 77825028 -25669946 + AT_rich Low_complexity Low_complexity 1 39 0 5 1178 334 316 75 103 chr15 77825093 77825424 -25669550 - L1MC4 LINE L1 -5171 1044 723 5 1178 357 50 33 16 chr15 77825425 77825486 -25669488 + (TTTG)n Simple_repeat Simple_repeat 3 64 0 5 1178 533 290 0 7 chr15 77826289 77826435 -25668539 - RSINE1 SINE B4 -19 146 2 5 1178 203 333 86 0 chr15 77827938 77828043 -25666931 + MIR SINE MIR 34 147 -115 5 1178 395 252 9 46 chr15 77828737 77828845 -25666129 - PB1D10 SINE Alu -9 108 5 5 1178 559 224 47 0 chr15 77829010 77829117 -25665857 - PB1D10 SINE Alu -5 112 1 5 1178 1347 72 0 0 chr15 77829130 77829310 -25665664 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 5 1178 768 187 58 0 chr15 77829338 77829477 -25665497 - B1_Mur2 SINE Alu -2 147 1 5 1178 228 184 0 0 chr15 77829802 77829851 -25665123 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1178 250 272 111 0 chr15 77829971 77830052 -25664922 - MIRb SINE MIR -124 144 55 5 1178 4260 83 6 93 chr15 77830606 77831273 -25663701 + Lx3B LINE L1 6363 6971 -2 5 1178 906 47 23 0 chr15 77831352 77831480 -25663494 + (TG)n Simple_repeat Simple_repeat 1 131 0 5 1178 214 339 0 0 chr15 77831553 77831615 -25663359 - MIRm SINE MIR -118 158 97 5 1178 204 130 36 36 chr15 77832319 77832375 -25662599 + GA-rich Low_complexity Low_complexity 2 57 0 5 1178 492 137 146 10 chr15 77832705 77832808 -25662166 - B1F SINE Alu -14 135 19 5 1178 387 106 0 0 chr15 77833573 77833639 -25661335 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 1178 347 41 20 0 chr15 77833669 77833718 -25661256 + (GA)n Simple_repeat Simple_repeat 2 51 0 5 1178 186 319 58 0 chr15 77833748 77833817 -25661157 + MIR SINE MIR 112 184 -78 5 1178 258 292 308 0 chr15 77834252 77834372 -25660602 - RSINE1 SINE B4 -8 157 1 5 1178 192 336 26 43 chr15 77834720 77834835 -25660139 + MIR3 SINE MIR 94 206 -2 5 1178 210 195 0 0 chr15 77834944 77834985 -25659989 - MIRc SINE MIR -143 125 85 5 1178 351 208 283 0 chr15 77835344 77835450 -25659524 - B1_Mur4 SINE Alu -10 140 5 5 1178 205 360 30 10 chr15 77836151 77836252 -25658722 - MIR SINE MIR -1 261 159 5 1178 182 174 22 0 chr15 77836609 77836655 -25658319 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1178 180 171 0 0 chr15 77836779 77836814 -25658160 + L2b LINE L2 3328 3362 -13 6 1178 180 152 0 0 chr15 77836965 77836998 -25657976 + (CATA)n Simple_repeat Simple_repeat 2 34 0 6 1178 230 333 118 37 chr15 77837697 77837884 -25657090 + L2a LINE L2 3194 3395 -31 6 1178 1233 216 115 58 chr15 77838547 77838628 -25656346 + MTE2b LTR MaLR 1 83 -296 6 1178 1157 55 0 0 chr15 77838628 77838773 -25656201 - B1_Mus2 SINE Alu -1 146 2 6 1178 1233 216 115 58 chr15 77838773 77839039 -25655935 + MTE2b LTR MaLR 84 368 -11 6 1178 218 310 108 97 chr15 77839513 77839938 -25655036 + L2b LINE L2 2946 3375 0 6 1178 1926 169 14 6 chr15 77840086 77840431 -25654543 + ORR1B1 LTR MaLR 47 394 0 6 1178 421 274 40 8 chr15 77840994 77841007 -25653967 + B4 SINE B4 76 92 -200 6 1178 732 138 0 0 chr15 77841007 77841123 -25653851 + B1_Mur3 SINE Alu 4 119 -30 6 1178 396 0 0 0 chr15 77841123 77841167 -25653807 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 6 1178 1844 130 69 12 chr15 77841193 77841528 -25653446 + ORR1B1 LTR MaLR 41 394 0 6 1178 250 154 0 0 chr15 77841542 77841581 -25653393 + ID_B1 SINE B4 165 203 -21 6 1178 901 139 14 7 chr15 77842384 77842519 -25652455 + B1_Mur3 SINE Alu 3 139 -10 6 1178 306 0 0 0 chr15 77842519 77842553 -25652421 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1178 756 105 0 39 chr15 77842562 77842691 -25652283 + B1_Mur4 SINE Alu 27 150 0 6 1178 213 121 0 0 chr15 77842721 77842754 -25652220 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 6 1178 190 228 0 66 chr15 77843355 77843416 -25651558 - L2b LINE L2 -1 3374 3318 6 1178 304 203 7 11 chr15 77843492 77843597 -25651377 - L2b LINE L2 -192 3195 3089 6 1178 272 253 133 0 chr15 77844310 77844385 -25650589 - B1F SINE Alu -58 91 7 6 1178 220 250 33 0 chr15 77844333 77844393 -25650581 - B4A SINE B4 -148 144 83 6 1178 202 278 56 22 chr15 77844432 77844562 -25650412 - MIRb SINE MIR -93 175 37 6 1178 504 32 0 0 chr15 77844881 77844943 -25650031 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 1178 648 211 7 45 chr15 77845106 77845260 -25649714 - B1F SINE Alu -1 148 1 6 1178 456 279 0 0 chr15 77845285 77845457 -25649517 + (CA)n Simple_repeat Simple_repeat 1 172 0 6 1178 297 221 0 0 chr15 77845517 77845585 -25649389 + (CA)n Simple_repeat Simple_repeat 1 68 0 6 1178 1011 129 199 0 chr15 77846839 77847025 -25647949 + URR1A DNA MER1_type 1 223 -3 6 1178 435 38 0 0 chr15 77847052 77847105 -25647869 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1178 344 143 14 0 chr15 77847205 77847275 -25647699 + (TG)n Simple_repeat Simple_repeat 1 71 0 6 1178 226 290 150 14 chr15 77847305 77847452 -25647522 - L2 LINE L2 -1868 1551 1385 6 1178 429 20 0 0 chr15 77847601 77847651 -25647323 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1178 444 37 0 0 chr15 77848259 77848313 -25646661 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1178 214 87 0 42 chr15 77849894 77849942 -25645032 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 6 1178 1205 34 0 0 chr15 77849946 77850092 -25644882 - B1_Mus2 SINE Alu 0 147 2 6 1178 855 83 0 0 chr15 77851024 77851145 -25643829 + (TTCA)n Simple_repeat Simple_repeat 1 121 0 6 1178 259 333 0 11 chr15 77851376 77851470 -25643504 + MIRc SINE MIR 35 127 -141 6 1178 199 145 57 14 chr15 77851576 77851646 -25643328 + CT-rich Low_complexity Low_complexity 2 74 0 6 1178 451 252 19 0 chr15 77851650 77851757 -25643217 - PB1D10 SINE Alu -6 111 3 6 1178 873 199 23 41 chr15 77852186 77852406 -25642568 + B3 SINE B2 1 216 0 6 1178 706 169 8 15 chr15 77852518 77852650 -25642324 + B1_Mur4 SINE Alu 11 141 -9 6 1178 455 321 24 60 chr15 77853021 77853330 -25641644 + L1MA4A LINE L1 5707 6025 -275 6 1178 528 261 144 144 chr15 77853459 77853641 -25641333 + B4A SINE B4 15 213 -79 6 1178 939 110 14 0 chr15 77853641 77853786 -25641188 + B1_Mur2 SINE Alu 1 147 -2 6 1178 528 261 144 144 chr15 77853786 77853881 -25641093 + B4A SINE B4 214 292 0 6 1178 378 0 0 0 chr15 77853902 77853944 -25641030 + (CTA)n Simple_repeat Simple_repeat 2 43 0 6 1178 405 0 0 0 chr15 77853944 77853989 -25640985 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1178 263 276 13 13 chr15 77854112 77854189 -25640785 - MER2 DNA MER2_type -2 343 267 6 1178 350 294 3 62 chr15 77854349 77854510 -25640464 + MLT1J LTR MaLR 1 183 -329 6 1178 221 380 73 0 chr15 77855249 77855386 -25639588 + MIRb SINE MIR 114 260 -8 6 1178 387 254 45 0 chr15 77855925 77856035 -25638939 - PB1D10 SINE Alu -2 115 1 6 1178 962 162 0 6 chr15 77856038 77856218 -25638756 + CT-rich Low_complexity Low_complexity 2 180 0 6 1178 230 224 35 0 chr15 77856596 77856654 -25638320 + RMER15 LTR ERVL 1 60 -515 6 147 1957 196 146 15 chr15 77856682 77857163 -25637811 + RMER15 LTR ERVL 32 575 0 6 1179 224 384 0 10 chr15 77857510 77857610 -25637364 + L3 LINE CR1 4339 4437 -52 6 1179 208 262 45 80 chr15 77858072 77858184 -25636790 + MIRb SINE MIR 103 210 -58 6 1179 1999 65 0 35 chr15 77858295 77858584 -25636390 + L1_Mus1 LINE L1 6288 6566 -1 6 1179 648 227 30 0 chr15 77858611 77858743 -25636231 + B1_Mur3 SINE Alu 1 136 -13 6 1179 378 0 0 0 chr15 77858746 77858788 -25636186 + (CAAAC)n Simple_repeat Simple_repeat 2 43 0 6 1179 333 82 0 0 chr15 77858789 77858838 -25636136 + (CCAA)n Simple_repeat Simple_repeat 1 49 0 6 1179 228 67 0 0 chr15 77859777 77859807 -25635167 + (TGGGGG)n Simple_repeat Simple_repeat 6 35 0 6 1179 278 258 37 4 chr15 77860461 77860569 -25634405 - B1_Mus2 SINE Alu 0 117 2 6 1179 226 290 0 42 chr15 77860510 77860582 -25634392 - B4 SINE B4 -147 145 77 6 1179 214 214 0 0 chr15 77861086 77861128 -25633846 + MIRb SINE MIR 218 259 -9 6 1179 267 157 0 0 chr15 77861599 77861650 -25633324 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 1179 189 318 119 49 chr15 77863387 77863550 -25631424 + L2a LINE L2 2955 3139 -287 6 1179 450 272 19 12 chr15 77863554 77863714 -25631260 + RSINE1 SINE B4 3 163 -2 6 1179 216 200 0 0 chr15 77863718 77863768 -25631206 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1179 194 136 0 22 chr15 77863913 77863958 -25631016 + CT-rich Low_complexity Low_complexity 3 46 0 6 1179 691 186 0 30 chr15 77863966 77864099 -25630875 - B1F SINE Alu -1 148 20 6 1179 342 0 0 0 chr15 77864130 77864168 -25630806 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 6 1179 1207 27 0 0 chr15 77864827 77864973 -25630001 + B1_Mus2 SINE Alu 2 147 0 6 1179 416 277 7 37 chr15 77865156 77865291 -25629683 - L1M5 LINE L1 -1104 5042 4912 6 1179 295 341 51 55 chr15 77866311 77866547 -25628427 + MIR SINE MIR 21 255 -7 6 1179 866 144 14 7 chr15 77867571 77867711 -25627263 - B1_Mur3 SINE Alu -7 142 2 6 1179 869 170 148 5 chr15 77867735 77867924 -25627050 - B3 SINE B2 0 216 1 6 1179 230 360 42 10 chr15 77867930 77868113 -25626861 - MIRc SINE MIR -70 198 7 6 1179 208 175 32 0 chr15 77868127 77868190 -25626784 + (TG)n Simple_repeat Simple_repeat 1 65 0 6 1179 2257 180 40 45 chr15 77868193 77868722 -25626252 + RLTR17 LTR ERVK 105 630 -62 6 1179 231 36 0 0 chr15 77868765 77868793 -25626181 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1179 546 224 89 30 chr15 77869282 77869478 -25625496 - B3A SINE B2 0 216 9 6 1179 344 22 22 0 chr15 77869521 77869566 -25625408 + (TC)n Simple_repeat Simple_repeat 2 47 0 6 1179 270 106 0 0 chr15 77869566 77869612 -25625362 + (TA)n Simple_repeat Simple_repeat 2 48 0 6 1179 369 0 0 0 chr15 77869612 77869652 -25625322 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1179 979 267 21 21 chr15 77869691 77869970 -25625004 - B4 SINE B4 -4 288 10 6 1179 225 0 0 0 chr15 77870523 77870548 -25624426 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1179 347 360 15 39 chr15 77870634 77870764 -25624210 + MIR SINE MIR 5 131 -131 6 1179 309 320 30 20 chr15 77870864 77871044 -25623930 + CT-rich Low_complexity Low_complexity 1 181 0 6 1179 296 314 0 0 chr15 77872380 77872466 -25622508 - Lx8 LINE L1 -247 7226 7141 6 1179 342 45 0 0 chr15 77872970 77873014 -25621960 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1179 345 304 41 20 chr15 77873330 77873566 -25621408 - MIR SINE MIR -14 254 13 6 1179 219 240 198 0 chr15 77873639 77873735 -25621239 - MER5A DNA MER1_type -39 150 36 6 1179 623 222 8 8 chr15 77875003 77875130 -25619844 - B4 SINE B4 0 292 166 6 1179 251 273 57 66 chr15 77875225 77875331 -25619643 + MIR SINE MIR 23 127 -81 6 1179 240 242 42 0 chr15 77876078 77876205 -25618769 + CT-rich Low_complexity Low_complexity 1 132 0 6 1179 247 167 0 29 chr15 77876205 77876273 -25618701 + C-rich Low_complexity Low_complexity 5 70 0 6 1179 299 322 4 0 chr15 77876781 77876886 -25618088 - MIRc SINE MIR -98 170 63 6 1179 516 59 0 0 chr15 77877977 77878045 -25616929 + (TG)n Simple_repeat Simple_repeat 1 68 0 6 1179 555 286 131 0 chr15 77878045 77878213 -25616761 - B4 SINE B4 -22 270 81 6 1179 1111 176 42 0 chr15 77878531 77878747 -25616227 + URR1B DNA MER1_type 1 225 0 6 1179 477 110 0 0 chr15 77879280 77879353 -25615621 + (TCCA)n Simple_repeat Simple_repeat 4 76 0 6 1179 271 289 41 0 chr15 77879371 77879468 -25615506 + (TCCA)n Simple_repeat Simple_repeat 1 101 0 6 1179 572 238 24 0 chr15 77882463 77882589 -25612385 + RSINE1 SINE B4 2 130 -35 6 1179 219 321 104 25 chr15 77882589 77882626 -25612348 + B2_Mm2 SINE B2 1 176 -19 6 1179 444 324 169 35 chr15 77883426 77883794 -25611180 + MLT1J1 LTR MaLR 24 440 -8 6 1179 354 241 24 0 chr15 77883972 77884055 -25610919 + B4 SINE B4 1 85 -207 6 1179 794 219 12 0 chr15 77884060 77884220 -25610754 + B3 SINE B2 1 162 -54 6 1179 436 321 89 33 chr15 77884265 77884536 -25610438 + B4A SINE B4 3 288 -4 7 1179 710 269 69 15 chr15 77884575 77884779 -25610195 + B4 SINE B4 76 290 -2 6 1179 408 71 0 0 chr15 77884791 77884847 -25610127 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1179 333 0 0 0 chr15 77884909 77884946 -25610028 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1179 2448 67 0 65 chr15 77885500 77885852 -25609122 + ORR1A4 LTR MaLR 1 329 0 7 1179 571 233 30 8 chr15 77885953 77886087 -25608887 - B1_Mur3 SINE Alu 0 149 13 7 1179 1115 253 141 6 chr15 77886090 77886424 -25608550 - MTE2b LTR MaLR 0 379 1 7 1179 629 250 202 4 chr15 77887998 77888166 -25606808 - B4A SINE B4 -6 286 97 7 1179 333 0 0 0 chr15 77888166 77888203 -25606771 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1179 629 250 202 4 chr15 77888203 77888271 -25606703 - B4A SINE B4 -196 96 4 7 1179 216 0 0 0 chr15 77888375 77888399 -25606575 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 1179 335 365 34 29 chr15 77888721 77888997 -25605977 + L2b LINE L2 2827 3110 -265 7 1179 524 297 26 6 chr15 77889033 77889189 -25605785 + RSINE1 SINE B4 3 161 -4 7 1179 891 154 0 0 chr15 77889215 77889477 -25605497 + (CA)n Simple_repeat Simple_repeat 1 262 0 7 1179 323 306 0 46 chr15 77889546 77889697 -25605277 + CT-rich Low_complexity Low_complexity 2 145 0 7 1179 492 192 0 0 chr15 77889710 77889814 -25605160 + CT-rich Low_complexity Low_complexity 3 106 0 7 1179 240 270 94 94 chr15 77889946 77890073 -25604901 + L2b LINE L2 3257 3383 -4 7 1179 248 226 109 4 chr15 77890355 77890428 -25604546 + MIR SINE MIR 81 160 -108 7 1179 363 200 29 156 chr15 77890428 77890626 -25604348 - ORR1D1 LTR MaLR -25 359 174 7 1179 221 200 0 43 chr15 77890633 77890680 -25604294 + polypurine Low_complexity Low_complexity 3 47 0 7 1179 509 232 138 7 chr15 77890681 77890698 -25604276 - ORR1D1 LTR MaLR -198 180 163 7 1179 1223 80 11 0 chr15 77890698 77890874 -25604100 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 7 1179 529 183 160 8 chr15 77890874 77891008 -25603966 - ORR1D1 LTR MaLR -216 162 9 7 1179 661 60 0 0 chr15 77891610 77891693 -25603281 + L1Md_F2 LINE L1 5504 5586 -297 7 1179 7601 44 22 3 chr15 77891693 77892670 -25602304 + L1Md_F2 LINE L1 5587 6582 0 7 1179 192 282 41 0 chr15 77893269 77893349 -25601625 + MIR SINE MIR 86 176 -92 7 1179 206 277 31 0 chr15 77893444 77893509 -25601465 + C-rich Low_complexity Low_complexity 1 67 0 7 1179 21 36 0 0 chr15 77893680 77893708 -25601266 + AT_rich Low_complexity Low_complexity 1 28 0 7 1179 1005 288 21 21 chr15 77893815 77894102 -25600872 - B4 SINE B4 -4 288 2 7 1179 594 270 50 33 chr15 77894200 77894380 -25600594 + B3A SINE B2 1 183 -15 7 1179 198 242 0 0 chr15 77895736 77895802 -25599172 + CT-rich Low_complexity Low_complexity 3 68 0 7 1179 257 359 0 0 chr15 77895815 77895921 -25599053 + CT-rich Low_complexity Low_complexity 1 106 0 7 1179 203 257 54 0 chr15 77895922 77895996 -25598978 + (TCTA)n Simple_repeat Simple_repeat 2 79 0 7 1179 182 336 45 18 chr15 77896156 77896268 -25598706 - L4 LINE RTE -73 1956 1842 7 1179 754 119 15 0 chr15 77896306 77896440 -25598534 + (TG)n Simple_repeat Simple_repeat 2 137 0 7 1179 189 213 0 0 chr15 77896461 77896508 -25598466 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1179 227 344 14 38 chr15 77896596 77896762 -25598212 - MIR SINE MIR -72 196 40 7 1179 1265 0 0 7 chr15 77897221 77897367 -25597607 + (TTTC)n Simple_repeat Simple_repeat 4 148 0 7 1179 841 163 15 0 chr15 77897368 77897503 -25597471 - B1_Mur1 SINE Alu -7 142 6 7 1179 252 333 0 36 chr15 77897504 77897616 -25597358 + MIR SINE MIR 88 195 -67 7 1179 287 113 0 19 chr15 77897697 77897751 -25597223 + (TC)n Simple_repeat Simple_repeat 1 53 0 7 1179 180 0 0 0 chr15 77897751 77897771 -25597203 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 1179 476 133 0 12 chr15 77897771 77897855 -25597119 + (GA)n Simple_repeat Simple_repeat 2 84 0 7 1179 2329 137 60 15 chr15 77898626 77899027 -25595947 - MTC LTR MaLR -2 419 1 7 1179 1881 191 60 16 chr15 77899072 77899577 -25595397 + Lx9 LINE L1 7072 7639 -5 7 1179 225 216 144 22 chr15 77899640 77899730 -25595244 + B1F SINE Alu 49 149 0 7 1179 300 127 0 0 chr15 77899864 77899919 -25595055 + (TG)n Simple_repeat Simple_repeat 1 55 0 7 1179 640 283 97 47 chr15 77899919 77900197 -25594777 - B4A SINE B4 0 292 1 7 1179 196 273 33 33 chr15 77901054 77901145 -25593829 + L2a LINE L2 2632 2722 -697 7 1179 212 350 80 12 chr15 77901254 77901416 -25593558 + L2a LINE L2 2973 3145 -281 7 1179 319 257 0 26 chr15 77901503 77901659 -25593315 + (TATG)n Simple_repeat Simple_repeat 3 154 0 7 1179 210 278 20 14 chr15 77901691 77901837 -25593137 + (TATG)n Simple_repeat Simple_repeat 4 150 0 7 1179 576 246 15 8 chr15 77902891 77903022 -25591952 + RSINE1 SINE B4 2 133 -32 7 1179 237 33 0 0 chr15 77903026 77903056 -25591918 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 7 1179 24 0 0 0 chr15 77903074 77903098 -25591876 + AT_rich Low_complexity Low_complexity 1 24 0 7 1179 633 308 54 0 chr15 77903559 77903744 -25591230 + RMER30 DNA MER1_type 7 201 -1 7 1179 486 0 0 0 chr15 77904089 77904143 -25590831 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 1179 673 214 20 14 chr15 77904168 77904315 -25590659 - B3 SINE B2 -68 148 1 7 1179 450 0 0 0 chr15 77905310 77905360 -25589614 + (CAGGG)n Simple_repeat Simple_repeat 3 52 0 7 1179 459 167 26 17 chr15 77905751 77905867 -25589107 + Lx6 LINE L1 7317 7433 -27 7 1179 294 29 0 0 chr15 77905875 77905910 -25589064 + (TAA)n Simple_repeat Simple_repeat 1 35 0 7 1179 23 0 0 0 chr15 77906066 77906089 -25588885 + GC_rich Low_complexity Low_complexity 1 23 0 7 1179 405 0 0 0 chr15 77907055 77907100 -25587874 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 1179 905 107 7 0 chr15 77908508 77908648 -25586326 + (TCCC)n Simple_repeat Simple_repeat 2 142 0 7 1179 411 21 0 0 chr15 77908736 77908784 -25586190 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1179 298 306 58 29 chr15 77909617 77909755 -25585219 + L2b LINE L2 3225 3366 -9 7 1179 1422 50 0 0 chr15 77910118 77910297 -25584677 + (TG)n Simple_repeat Simple_repeat 1 179 0 7 1179 632 299 0 12 chr15 77910299 77910465 -25584509 - B3A SINE B2 -16 182 19 7 1179 240 405 47 7 chr15 77910487 77910636 -25584338 + MIRb SINE MIR 98 252 -16 7 1179 316 234 20 0 chr15 77911420 77911501 -25583473 + MIRc SINE MIR 73 154 -122 7 1179 202 168 31 10 chr15 77913195 77913259 -25581715 - L2a LINE L2 0 3426 3311 7 1179 185 323 112 35 chr15 77913997 77914167 -25580807 + MIR SINE MIR 1 183 -79 7 1179 282 258 0 0 chr15 77914240 77914302 -25580672 - BC1_Mm scRNA scRNA -72 80 19 7 1179 436 304 27 0 chr15 77914369 77914517 -25580457 + (CA)n Simple_repeat Simple_repeat 1 152 0 7 1179 245 258 0 20 chr15 77914562 77914661 -25580313 + (TATATG)n Simple_repeat Simple_repeat 3 99 0 7 1179 186 275 0 0 chr15 77914657 77914726 -25580248 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 7 1179 616 228 12 0 chr15 77914783 77914954 -25580020 + (CA)n Simple_repeat Simple_repeat 1 173 0 7 1179 1030 290 121 76 chr15 77914962 77915791 -25579183 + L1MB3 LINE L1 5314 6179 -4 7 1179 332 279 0 25 chr15 77916655 77916736 -25578238 + G-rich Low_complexity Low_complexity 3 81 0 7 1179 487 192 27 14 chr15 77916736 77916884 -25578090 + GA-rich Low_complexity Low_complexity 1 150 0 7 1179 443 255 44 115 chr15 77917080 77917262 -25577712 + MTE2a LTR MaLR 9 177 -202 7 1179 850 257 29 19 chr15 77917266 77917476 -25577498 + B3 SINE B2 2 213 -3 7 1179 334 202 31 59 chr15 77917556 77917663 -25577311 + MTE2a LTR MaLR 270 388 -31 7 1179 360 278 191 28 chr15 77917719 77917832 -25577142 - MLT2B3 LTR ERVL -345 209 73 7 1179 441 0 0 0 chr15 77917832 77917881 -25577093 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1179 360 278 191 28 chr15 77917881 77917945 -25577029 - MLT2B3 LTR ERVL -482 72 3 7 1179 222 214 0 0 chr15 77918090 77918132 -25576842 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1179 898 144 0 11 chr15 77918451 77918633 -25576341 + CT-rich Low_complexity Low_complexity 1 180 0 7 1179 756 279 75 50 chr15 77918852 77919131 -25575843 - B4A SINE B4 -4 288 3 7 1179 567 195 0 42 chr15 77919181 77919299 -25575675 - PB1D10 SINE Alu -3 114 2 7 1179 673 212 8 0 chr15 77919499 77919631 -25575343 + B1F SINE Alu 1 133 -16 7 1179 261 338 0 0 chr15 77919631 77919711 -25575263 + GA-rich Low_complexity Low_complexity 1 80 0 7 1179 246 81 0 0 chr15 77920290 77920327 -25574647 + (TC)n Simple_repeat Simple_repeat 1 37 0 7 1179 519 31 0 0 chr15 77920341 77920406 -25574568 + (GA)n Simple_repeat Simple_repeat 2 66 0 7 1179 495 209 19 9 chr15 77920454 77920560 -25574414 - RSINE1 SINE B4 -55 110 4 7 1179 289 299 49 49 chr15 77920562 77920706 -25574268 - B4 SINE B4 -147 145 2 7 1179 664 214 8 0 chr15 77921421 77921552 -25573422 - B1_Mur1 SINE Alu -16 133 2 7 1179 414 0 0 0 chr15 77922219 77922265 -25572709 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1179 241 208 22 7 chr15 77922718 77922804 -25572170 - MIR SINE MIR -68 194 114 7 1179 354 298 24 11 chr15 77922922 77923098 -25571876 + MIR SINE MIR 58 232 -30 7 1179 927 285 11 46 chr15 77923783 77924044 -25570930 - B4 SINE B4 -6 286 35 7 1179 415 283 18 59 chr15 77924481 77924650 -25570324 - MIRc SINE MIR -104 164 3 7 1179 263 317 9 9 chr15 77924757 77924862 -25570112 + (TG)n Simple_repeat Simple_repeat 2 106 0 7 1179 180 0 0 0 chr15 77925529 77925549 -25569425 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 7 1179 727 254 41 27 chr15 77927862 77928081 -25566893 - ID_B1 SINE B4 -2 222 1 7 1179 332 266 39 24 chr15 77929486 77929613 -25565361 + MIRb SINE MIR 72 200 -68 7 1179 5361 141 124 32 chr15 77930723 77931836 -25563138 + RMER12 LTR ERVK 1 1215 -107 7 1179 1109 240 68 11 chr15 77931888 77932153 -25562821 + MTE2a LTR MaLR 98 377 -2 7 1179 402 383 64 0 chr15 77932364 77932599 -25562375 + MER2 DNA MER2_type 5 254 -91 7 1179 419 186 0 10 chr15 77932600 77932698 -25562276 + CT-rich Low_complexity Low_complexity 3 99 0 7 1179 465 122 0 0 chr15 77933281 77933355 -25561619 + (TG)n Simple_repeat Simple_repeat 1 74 0 7 1179 1100 257 4 0 chr15 77933356 77933597 -25561377 - B4 SINE B4 -49 243 2 7 1179 186 306 202 10 chr15 77933847 77933946 -25561028 - MIRb SINE MIR -111 157 40 7 1179 525 135 216 0 chr15 77936055 77936166 -25558808 - B1_Mur3 SINE Alu -1 148 14 8 1179 248 264 194 24 chr15 77936166 77936179 -25558795 - ID_B1 SINE B4 -1 223 79 8 1179 286 343 166 13 chr15 77936336 77936649 -25558325 + MLT1D LTR MaLR 136 496 -9 8 1179 661 284 35 65 chr15 77937608 77937898 -25557076 - B4A SINE B4 -1 291 11 8 1179 1022 254 94 29 chr15 77938417 77938725 -25556249 + MTE2b LTR MaLR 21 348 -31 8 1179 737 251 6 0 chr15 77938787 77938954 -25556020 - B3A SINE B2 -30 168 1 8 1179 202 270 216 0 chr15 77939520 77939594 -25555380 + MIRb SINE MIR 39 128 -140 8 1179 668 251 124 31 chr15 77939716 77939942 -25555032 + B4 SINE B4 1 247 -45 8 1179 420 71 0 0 chr15 77940025 77940081 -25554893 + (CACCAT)n Simple_repeat Simple_repeat 4 59 0 8 1179 1237 224 63 49 chr15 77940949 77941297 -25553677 + ORR1E LTR MaLR 1 353 -6 8 1179 840 308 5 0 chr15 77942098 77942306 -25552668 - B4 SINE B4 0 292 84 8 1179 672 267 92 55 chr15 77942336 77942609 -25552365 - B4 SINE B4 -8 284 2 8 1179 588 14 0 0 chr15 77942732 77942801 -25552173 + (CA)n Simple_repeat Simple_repeat 2 70 0 8 1179 582 191 0 0 chr15 77943066 77943200 -25551774 - B1F SINE Alu -6 143 10 8 1179 267 277 49 40 chr15 77943623 77943750 -25551224 - L2a LINE L2 0 3387 3264 8 1179 309 151 0 0 chr15 77943753 77943806 -25551168 + (CAA)n Simple_repeat Simple_repeat 3 55 0 8 1179 284 185 14 58 chr15 77944611 77944680 -25550294 + MIRm SINE MIR 44 109 -167 8 1179 504 0 0 0 chr15 77945151 77945207 -25549767 + (TC)n Simple_repeat Simple_repeat 1 56 0 8 1179 197 264 75 0 chr15 77945264 77945317 -25549657 - L2a LINE L2 -10 3416 3360 8 1179 241 185 19 0 chr15 77949041 77949095 -25545879 + G-rich Low_complexity Low_complexity 3 57 0 8 1179 282 194 0 0 chr15 77949956 77950023 -25544951 + (CGG)n Simple_repeat Simple_repeat 1 67 0 8 1179 432 0 0 0 chr15 77950652 77950700 -25544274 + (TC)n Simple_repeat Simple_repeat 1 48 0 8 1179 441 271 30 15 chr15 77953144 77953275 -25541699 + MIRb SINE MIR 14 146 -122 8 1179 309 296 37 22 chr15 77953368 77953503 -25541471 - MIR SINE MIR -77 185 49 8 1179 201 233 100 0 chr15 77953681 77953741 -25541233 - MIR SINE MIR -89 119 54 8 1179 363 208 0 51 chr15 77953844 77953935 -25541039 + B1F1 SINE Alu 5 90 -30 8 1179 441 0 0 0 chr15 77953935 77953984 -25540990 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1179 276 111 0 0 chr15 77953994 77954039 -25540935 + (GA)n Simple_repeat Simple_repeat 2 46 0 8 1179 355 354 62 0 chr15 77954554 77954749 -25540225 + L2a LINE L2 3200 3406 -20 8 1179 200 343 0 0 chr15 77954882 77954949 -25540025 + L2c LINE L2 3320 3386 -1 8 1179 298 306 83 0 chr15 77955191 77955312 -25539662 + MIRb SINE MIR 23 153 -115 8 1179 812 182 0 6 chr15 77956174 77956351 -25538623 + GA-rich Low_complexity Low_complexity 3 178 0 8 1179 385 258 10 10 chr15 77956418 77956516 -25538458 + RSINE1 SINE B4 13 110 -55 8 1179 215 306 382 28 chr15 77956635 77956881 -25538093 + L2c LINE L2 3034 3367 -20 8 1179 565 309 71 110 chr15 77958076 77958440 -25536534 + MTEa LTR MaLR 1 350 -29 8 1179 678 109 0 0 chr15 77958826 77958927 -25536047 + (TTCC)n Simple_repeat Simple_repeat 4 104 0 8 1179 711 206 62 153 chr15 77958927 77958939 -25536035 - ID_B1 SINE B4 0 224 213 8 1179 333 0 0 0 chr15 77958939 77958976 -25535998 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 8 1179 711 206 62 153 chr15 77958976 77959042 -25535932 - ID_B1 SINE B4 -12 212 157 8 1179 604 235 166 11 chr15 77959042 77959223 -25535751 - B3 SINE B2 -7 209 1 8 1179 711 206 62 153 chr15 77959223 77959384 -25535590 - ID_B1 SINE B4 -68 156 6 8 1179 492 303 0 32 chr15 77959510 77959667 -25535307 - MIR SINE MIR -55 207 56 8 1179 982 130 7 7 chr15 77960782 77960929 -25534045 - B1_Mus2 SINE Alu 0 147 1 8 1179 32 0 0 0 chr15 77961592 77961624 -25533350 + AT_rich Low_complexity Low_complexity 1 32 0 8 1179 682 336 42 24 chr15 77961651 77961938 -25533036 - B4A SINE B4 0 292 1 8 1179 308 392 47 36 chr15 77961994 77962187 -25532787 - L1M5 LINE L1 -1089 5057 4863 8 1179 423 0 0 0 chr15 77962527 77962574 -25532400 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1179 468 0 0 0 chr15 77962574 77962625 -25532349 + (GA)n Simple_repeat Simple_repeat 2 53 0 8 1179 1315 113 106 19 chr15 77962658 77962866 -25532108 - URR1A DNA MER1_type 0 226 1 8 1179 261 0 0 0 chr15 77963092 77963121 -25531853 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 8 1179 449 234 32 0 chr15 77963178 77963272 -25531702 + B1F1 SINE Alu 1 97 -52 8 1179 897 240 72 5 chr15 77963557 77963766 -25531208 + ID_B1 SINE B4 2 224 0 8 1179 612 307 0 20 chr15 77963785 77963927 -25531047 + RSINE1 SINE B4 2 141 -24 8 1179 252 0 0 0 chr15 77963927 77963955 -25531019 + (CA)n Simple_repeat Simple_repeat 2 29 0 8 1179 378 0 0 0 chr15 77964600 77964642 -25530332 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 1179 240 111 0 0 chr15 77964936 77964972 -25530002 + (T)n Simple_repeat Simple_repeat 1 36 0 8 1179 897 269 9 5 chr15 77966215 77966432 -25528542 + ID_B1 SINE B4 5 222 -2 8 1179 264 331 120 17 chr15 77966677 77966852 -25528122 - Tigger7 DNA MER2_type -43 2448 2256 8 1179 473 200 105 0 chr15 77967199 77967294 -25527680 - PB1 SINE Alu -2 125 21 8 1179 225 330 32 56 chr15 77968036 77968161 -25526813 + MIR SINE MIR 1 122 -140 8 1179 423 0 0 0 chr15 77968458 77968505 -25526469 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1179 496 224 9 27 chr15 77969744 77969854 -25525120 + RSINE1 SINE B4 3 110 -55 8 1179 210 334 35 21 chr15 77970254 77970398 -25524576 + MIRb SINE MIR 78 221 -41 8 1179 333 240 40 0 chr15 77971401 77971476 -25523498 - ID4 SINE ID -5 78 1 8 1179 1127 254 60 106 chr15 77974075 77974472 -25520502 + MTE2a LTR MaLR 1 379 0 8 1179 1149 278 18 11 chr15 77974669 77974945 -25520029 + B4A SINE B4 13 290 -2 8 1179 745 248 39 25 chr15 77974952 77975155 -25519819 + B4 SINE B4 84 289 -3 8 1179 432 104 0 0 chr15 77975158 77975225 -25519749 + (CA)n Simple_repeat Simple_repeat 1 67 0 8 1179 641 252 6 30 chr15 77975236 77975394 -25519580 + ID_B1 SINE B4 74 224 -68 8 1179 741 110 0 0 chr15 77975914 77976041 -25518933 + (CA)n Simple_repeat Simple_repeat 2 128 0 8 1179 189 324 0 51 chr15 77976636 77976714 -25518260 - MIR3 SINE MIR -49 159 86 8 1179 207 0 0 0 chr15 77977830 77977853 -25517121 + (CACCC)n Simple_repeat Simple_repeat 3 25 0 8 1179 413 336 79 51 chr15 77978072 77978326 -25516648 - MLT1J2-int LTR MaLR -841 648 388 8 1179 253 215 76 15 chr15 77978326 77978392 -25516582 - MIRb SINE MIR -194 74 5 8 1179 396 308 20 20 chr15 77978958 77979107 -25515867 + MER58A DNA MER1_type 51 199 -25 8 1179 365 302 72 26 chr15 77979119 77979313 -25515661 - MLT1J2 LTR MaLR -241 207 5 8 1179 651 78 0 0 chr15 77979761 77979851 -25515123 + (TG)n Simple_repeat Simple_repeat 1 90 0 8 1179 468 0 0 0 chr15 77981768 77981820 -25513154 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 1179 258 200 0 52 chr15 77982195 77982253 -25512721 - ID_B1 SINE B4 -1 223 169 8 1179 367 190 125 12 chr15 77982201 77982281 -25512693 - PB1D10 SINE Alu -7 110 22 8 1179 320 292 8 66 chr15 77982543 77982562 -25512412 - PB1D10 SINE Alu -3 114 1 8 1179 421 238 0 0 chr15 77982562 77982664 -25512310 - B4 SINE B4 -105 187 86 8 1179 222 263 0 34 chr15 77983091 77983150 -25511824 + GA-rich Low_complexity Low_complexity 2 58 0 8 1179 309 293 143 19 chr15 77983707 77983922 -25511052 + L1M5 LINE L1 5533 5769 -2113 8 1179 498 200 161 81 chr15 77984205 77984379 -25510595 - B4A SINE B4 -104 188 1 8 1179 295 312 37 0 chr15 77984407 77984431 -25510543 + ID_B1 SINE B4 63 172 -49 8 1179 382 232 0 0 chr15 77984431 77984513 -25510461 + PB1D10 SINE Alu 10 91 -26 8 1179 691 185 96 0 chr15 77984732 77984867 -25510107 - B1F1 SINE Alu -1 148 1 8 1179 194 128 0 25 chr15 77984872 77984912 -25510062 + C-rich Low_complexity Low_complexity 6 44 0 8 1179 297 315 15 0 chr15 77985025 77985129 -25509845 - MIRc SINE MIR -77 185 77 8 1179 198 0 0 0 chr15 77985158 77985180 -25509794 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 8 1179 185 0 0 39 chr15 77985268 77985294 -25509680 + (CCA)n Simple_repeat Simple_repeat 2 26 0 8 1179 828 243 0 116 chr15 77986208 77986459 -25508515 + ID_B1 SINE B4 3 224 0 8 1179 792 261 49 94 chr15 77987039 77987326 -25507648 + B4A SINE B4 3 276 -16 8 1179 180 97 0 0 chr15 77987808 77987839 -25507135 + (A)n Simple_repeat Simple_repeat 1 31 0 8 1180 181 267 145 13 chr15 77989055 77989131 -25505843 + MIR SINE MIR 129 214 -48 8 1180 792 253 106 5 chr15 77991117 77991316 -25503658 - ID_B1 SINE B4 -2 222 4 8 1180 289 188 12 12 chr15 77991318 77991399 -25503575 + (CACCAT)n Simple_repeat Simple_repeat 3 83 0 8 1180 507 269 0 27 chr15 77991399 77991510 -25503464 - PB1D10 SINE Alu -8 109 2 8 1180 326 379 31 0 chr15 77992400 77992569 -25502405 + MIRb SINE MIR 35 205 -57 8 1180 180 356 107 7 chr15 77993443 77993593 -25501381 - MIRb SINE MIR -21 247 83 8 1180 1068 275 105 43 chr15 77997696 77998133 -25496841 + RMER4A LTR ERVK 3 466 0 8 1180 357 24 0 0 chr15 77998985 77999027 -25495947 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 1180 222 274 0 0 chr15 77999404 77999455 -25495519 + (CCA)n Simple_repeat Simple_repeat 2 52 0 9 1180 862 82 19 30 chr15 78001629 78001773 -25493201 + B1_Mm SINE Alu 26 311 0 1 1180 600 14 0 0 chr15 78001854 78001923 -25493051 + (CA)n Simple_repeat Simple_repeat 2 70 0 2 1180 180 327 18 0 chr15 78002280 78002335 -25492639 + MIRm SINE MIR 217 272 -4 3 1180 22 35 0 0 chr15 78002775 78002804 -25492170 + AT_rich Low_complexity Low_complexity 1 29 0 4 1180 1155 255 82 9 chr15 78003115 78003432 -25491542 + MTEa LTR MaLR 39 378 -1 5 1180 288 233 0 0 chr15 78005544 78005604 -25489370 - MTEb LTR MaLR -17 362 303 6 1180 2622 64 3 3 chr15 78005765 78006092 -25488882 + ORR1A2 LTR MaLR 1 327 0 7 1180 247 307 98 21 chr15 78006403 78006546 -25488428 + RMER15 LTR ERVL 384 537 -38 8 1180 1239 61 0 0 chr15 78007201 78007348 -25487626 + B1_Mus2 SINE Alu 1 147 0 9 1180 262 324 0 8 chr15 78007409 78007503 -25487471 - ID4 SINE ID -50 102 12 1 1180 364 227 53 26 chr15 78008350 78008463 -25486511 - MER20 DNA MER1_type -102 117 2 1 1180 423 0 0 0 chr15 78008532 78008579 -25486395 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 1180 297 0 0 0 chr15 78009143 78009176 -25485798 + (T)n Simple_repeat Simple_repeat 1 33 0 1 1180 250 256 246 41 chr15 78009730 78009852 -25485122 + RSINE1 SINE B4 1 147 -18 1 1180 985 297 40 7 chr15 78010721 78010999 -25483975 + B4 SINE B4 2 288 -4 1 1180 206 81 27 0 chr15 78011013 78011050 -25483924 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1180 280 263 52 13 chr15 78011099 78011176 -25483798 + PB1 SINE Alu 43 122 -5 1 1180 284 86 28 28 chr15 78011180 78011252 -25483722 + (CAAAA)n Simple_repeat Simple_repeat 2 73 0 1 1180 248 323 110 37 chr15 78011512 78011676 -25483298 + MIRb SINE MIR 67 242 -26 1 1180 441 0 0 0 chr15 78012141 78012190 -25482784 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1180 380 326 24 82 chr15 78013163 78013370 -25481604 - MLT1C LTR MaLR -5 462 191 2 1180 320 248 78 19 chr15 78013565 78013668 -25481306 + PB1D7 SINE Alu 3 111 -9 2 1180 333 0 0 0 chr15 78013669 78013706 -25481268 + (CAA)n Simple_repeat Simple_repeat 3 39 0 2 1180 257 326 83 43 chr15 78013875 78014151 -25480823 - RMER17C LTR ERVK -46 364 78 2 1180 259 291 46 11 chr15 78015732 78015819 -25479155 - B4A SINE B4 -200 92 3 2 1180 324 0 0 0 chr15 78015976 78016012 -25478962 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1180 430 225 79 26 chr15 78016179 78016293 -25478681 + RSINE1 SINE B4 5 124 -41 2 1180 1120 266 151 75 chr15 78016447 78016890 -25478084 + RLTR33 LTR ERVK 175 651 -27 2 1180 240 294 15 0 chr15 78017076 78017144 -25477830 + MIRc SINE MIR 79 147 -121 2 1180 292 327 80 0 chr15 78017183 78017296 -25477678 - MLT1A0 LTR MaLR 0 365 244 3 1180 776 277 48 149 chr15 78017381 78017885 -25477089 - RLTR12B LTR ERVK -29 499 47 3 1180 272 94 19 0 chr15 78018006 78018059 -25476915 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1180 733 262 0 7 chr15 78018067 78018217 -25476757 - RSINE1 SINE B4 -16 149 1 3 1180 342 0 0 0 chr15 78018233 78018271 -25476703 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 1180 557 270 98 151 chr15 78018319 78018384 -25476590 - B4A SINE B4 0 292 226 3 1180 1416 172 0 0 chr15 78018384 78018599 -25476375 - B3 SINE B2 0 216 2 3 1180 557 270 98 151 chr15 78018599 78018838 -25476136 - B4A SINE B4 -67 225 4 3 1180 260 361 46 20 chr15 78020808 78020963 -25474011 + MIRb SINE MIR 28 184 -84 3 1180 1302 246 54 43 chr15 78021221 78021594 -25473380 + MTEa LTR MaLR 1 377 -2 3 1180 186 390 9 45 chr15 78021659 78021769 -25473205 + MIRb SINE MIR 116 221 -47 3 1180 242 276 53 0 chr15 78022667 78022743 -25472231 + L1MC4a LINE L1 7757 7836 -46 4 1180 235 287 62 36 chr15 78023210 78023322 -25471652 - MIR SINE MIR -66 196 82 4 1180 205 247 186 12 chr15 78023629 78023715 -25471259 - MIRm SINE MIR -112 164 64 4 1180 240 141 39 0 chr15 78025173 78025225 -25469749 + MIRc SINE MIR 96 158 -110 4 1180 193 220 20 20 chr15 78026329 78026380 -25468594 + MIRm SINE MIR 110 160 -116 4 1180 213 330 170 0 chr15 78027289 78027395 -25467579 + MER5A DNA MER1_type 3 126 -63 4 1180 405 0 0 0 chr15 78027517 78027562 -25467412 + (TC)n Simple_repeat Simple_repeat 1 45 0 4 1180 369 0 0 0 chr15 78027562 78027602 -25467372 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1180 220 281 0 50 chr15 78028345 78028405 -25466569 + MIRb SINE MIR 118 174 -94 4 1180 843 20 0 0 chr15 78029362 78029463 -25465511 + (TG)n Simple_repeat Simple_repeat 2 102 0 4 1180 931 202 112 20 chr15 78029650 78029847 -25465127 - B3 SINE B2 -1 215 1 5 1180 199 322 135 40 chr15 78030626 78030752 -25464222 - MIRb SINE MIR -24 244 107 5 1180 216 0 0 0 chr15 78031110 78031134 -25463840 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1180 260 295 44 9 chr15 78031265 78031378 -25463596 - MIR3 SINE MIR -44 164 48 5 1180 242 342 65 53 chr15 78037860 78038107 -25456867 - ORR1E LTR MaLR -20 339 90 5 1180 296 368 105 0 chr15 78038673 78038825 -25456149 - MIRb SINE MIR -77 191 24 5 1180 180 0 0 0 chr15 78038856 78038876 -25456098 + (GGGTG)n Simple_repeat Simple_repeat 3 22 0 5 1180 1087 118 130 0 chr15 78039070 78039239 -25455735 + B2_Mm1t SINE B2 1 191 -2 5 1180 193 74 0 0 chr15 78039240 78039267 -25455707 - MIR SINE MIR -163 99 73 5 1180 7089 149 9 31 chr15 78039526 78040665 -25454309 + RLTR13D3 LTR ERVK 1 1114 0 5 1180 446 0 0 18 chr15 78041261 78041316 -25453658 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1180 636 251 181 18 chr15 78041322 78041549 -25453425 - B4A SINE B4 -27 265 2 6 1180 344 256 12 28 chr15 78041738 78041861 -25453113 - MIRc SINE MIR -116 152 27 6 1180 299 239 2 24 chr15 78042216 78042306 -25452668 + MIRc SINE MIR 82 166 -110 6 1180 353 305 29 0 chr15 78042341 78042463 -25452511 + B1F SINE Alu 16 141 -8 6 1180 425 392 56 13 chr15 78043311 78043616 -25451358 + MLT1B LTR MaLR 2 319 -71 6 1180 1127 99 6 0 chr15 78043939 78044111 -25450863 + (TCCA)n Simple_repeat Simple_repeat 2 174 0 6 1180 226 295 0 0 chr15 78044116 78044177 -25450797 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 6 1180 736 172 11 0 chr15 78044178 78044352 -25450622 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 6 1180 293 265 15 0 chr15 78044368 78044436 -25450538 + (TCCA)n Simple_repeat Simple_repeat 4 72 0 6 1180 260 27 0 26 chr15 78044557 78044595 -25450379 + (TAA)n Simple_repeat Simple_repeat 3 39 0 6 1180 199 333 0 58 chr15 78044621 78044707 -25450267 - MIRb SINE MIR -11 257 177 7 1180 339 306 0 18 chr15 78044733 78044846 -25450128 - MLT1H2 LTR MaLR -10 479 369 7 1180 531 0 0 0 chr15 78045025 78045084 -25449890 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 7 1180 358 154 13 13 chr15 78045502 78045581 -25449393 + GA-rich Low_complexity Low_complexity 2 80 0 7 1180 867 169 169 27 chr15 78046212 78046395 -25448579 - B3 SINE B2 -4 212 4 7 1180 235 200 0 0 chr15 78046509 78046559 -25448415 - Lx8 LINE L1 -8 7465 7416 7 1180 1582 187 105 14 chr15 78046567 78046930 -25448044 - MTD LTR MaLR -14 405 10 7 1180 358 289 0 0 chr15 78047149 78047232 -25447742 + Lx8 LINE L1 7137 7219 -254 7 1180 245 271 0 125 chr15 78047236 78047316 -25447658 + RMER15 LTR ERVL 393 462 -113 7 1180 784 264 0 66 chr15 78047580 78047791 -25447183 + B3A SINE B2 1 197 -1 7 1180 385 206 21 25 chr15 78049048 78049149 -25445825 - B4 SINE B4 -65 100 1 8 1180 316 320 38 89 chr15 78049216 78049356 -25445618 - PB1D10 SINE Alu -182 132 1 8 1180 242 315 30 71 chr15 78049277 78049376 -25445598 - ID_B1 SINE B4 -67 157 63 8 1180 510 265 68 8 chr15 78050113 78050246 -25444728 - ID_B1 SINE B4 -3 221 81 8 1180 188 0 0 69 chr15 78050279 78050308 -25444666 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 1180 998 116 14 0 chr15 78050326 78050464 -25444510 - B1_Mur4 SINE Alu -10 140 1 8 1180 230 227 0 0 chr15 78050464 78050508 -25444466 - ID_B1 SINE B4 -132 92 49 8 1180 229 247 31 92 chr15 78050787 78050885 -25444089 + MLT1H-int LTR MaLR 524 615 -794 8 1180 618 242 19 57 chr15 78050897 78051055 -25443919 + MTEa LTR MaLR 1 152 -227 8 1180 249 247 99 0 chr15 78051258 78051339 -25443635 + MTEa LTR MaLR 279 367 -12 8 1180 536 218 27 0 chr15 78051559 78051669 -25443305 + RSINE1 SINE B4 2 114 -51 8 1180 414 0 0 0 chr15 78051671 78051717 -25443257 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1180 439 341 186 22 chr15 78051807 78052119 -25442855 + MLT1H-int LTR MaLR 881 1243 -166 8 1180 198 0 0 0 chr15 78052337 78052359 -25442615 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 9 1180 441 0 0 0 chr15 78052877 78052926 -25442048 + (TC)n Simple_repeat Simple_repeat 2 50 0 9 1180 230 282 67 45 chr15 78053053 78053142 -25441832 - B4 SINE B4 -115 177 87 9 1180 385 337 68 26 chr15 78053171 78053363 -25441611 - B4A SINE B4 -1 291 92 9 1180 1231 191 160 53 chr15 78053486 78053824 -25441150 + ORR1D1 LTR MaLR 1 374 0 9 1180 298 306 79 32 chr15 78053835 78054051 -25440923 - L1MA6 LINE L1 -127 6173 5948 9 1180 284 319 69 39 chr15 78054055 78054260 -25440714 - L1MA6 LINE L1 -500 5800 5604 9 1180 1173 55 7 14 chr15 78054260 78054408 -25440566 - B1_Mus1 SINE Alu -1 147 1 9 1180 248 330 47 90 chr15 78054408 78054458 -25440516 - L1MA6 LINE L1 -697 5603 5556 9 1180 954 67 0 0 chr15 78054494 78054629 -25440345 + (TTTTC)n Simple_repeat Simple_repeat 3 137 0 9 1180 3130 41 36 46 chr15 78054771 78055182 -25439792 + MTB_Mm LTR MaLR 1 407 0 9 1180 935 197 79 28 chr15 78056135 78056349 -25438625 - URR1B DNA MER1_type 0 225 1 9 1180 629 220 141 23 chr15 78056979 78057156 -25437818 + B3 SINE B2 2 199 -17 1 1180 687 174 0 0 chr15 78057167 78057345 -25437629 + (CA)n Simple_repeat Simple_repeat 1 178 0 1 1180 192 143 0 0 chr15 78057383 78057425 -25437549 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1180 1082 299 40 42 chr15 78057539 78057887 -25437087 + Lx8 LINE L1 6992 7334 -139 1 1180 665 34 11 0 chr15 78057887 78057975 -25436999 + (GA)n Simple_repeat Simple_repeat 2 90 0 1 1180 1082 299 40 42 chr15 78057975 78058080 -25436894 + Lx8 LINE L1 7335 7443 -30 1 1180 243 0 0 0 chr15 78058894 78058921 -25436053 + (TGGGGG)n Simple_repeat Simple_repeat 3 29 0 1 1180 503 157 0 33 chr15 78059006 78059098 -25435876 - ID_B1 SINE B4 -1 223 135 1 1180 216 97 0 0 chr15 78059474 78059505 -25435469 + (TCC)n Simple_repeat Simple_repeat 3 33 0 1 1180 237 326 10 115 chr15 78059606 78059710 -25435264 - B4A SINE B4 -189 103 11 1 1180 301 259 8 104 chr15 78061039 78061059 -25433915 + ID SINE ID 64 71 -153 1 1180 505 290 8 0 chr15 78061059 78061183 -25433791 + PB1 SINE Alu 2 126 -1 1 1180 932 215 0 46 chr15 78061812 78061928 -25433046 - ORR1D1 LTR MaLR 0 374 263 1 1180 1579 198 83 17 chr15 78061928 78062147 -25432827 + ORR1D1 LTR MaLR 2 242 -132 1 1180 279 0 0 0 chr15 78062147 78062178 -25432796 + (CCTG)n Simple_repeat Simple_repeat 4 34 0 1 1180 1579 198 83 17 chr15 78062178 78062308 -25432666 + ORR1D1 LTR MaLR 243 373 -1 1 1180 932 224 14 48 chr15 78062308 78062437 -25432537 - ORR1D1 LTR MaLR -112 262 118 1 1180 198 0 0 0 chr15 78062951 78062973 -25432001 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1 1180 4543 41 0 0 chr15 78063375 78063887 -25431087 + RLTR1B LTR ERV1 1 512 0 1 1180 324 0 0 0 chr15 78064048 78064084 -25430890 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1180 824 233 0 0 chr15 78064086 78064232 -25430742 - RSINE1 SINE B4 -17 148 3 1 1180 572 73 12 0 chr15 78064290 78064372 -25430602 + (TTG)n Simple_repeat Simple_repeat 3 85 0 1 1180 450 79 0 0 chr15 78064372 78064435 -25430539 + (TGG)n Simple_repeat Simple_repeat 2 64 0 1 1180 655 200 0 0 chr15 78064440 78064565 -25430409 - ID_B1 SINE B4 -2 222 98 1 1180 428 364 34 9 chr15 78064679 78064912 -25430062 + RMER5 LTR ERV1 296 534 0 1 1180 500 59 38 38 chr15 78065800 78065906 -25429068 + (TCTCTG)n Simple_repeat Simple_repeat 3 108 0 1 1180 237 232 72 0 chr15 78066250 78066319 -25428655 + MER58B DNA MER1_type 265 338 -3 1 1180 1127 244 88 68 chr15 78066641 78067224 -25427750 - RCHARR1 DNA MER1_type -2 972 427 1 1180 369 0 0 0 chr15 78067224 78067265 -25427709 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1180 904 276 135 70 chr15 78067265 78067708 -25427266 - RCHARR1 DNA MER1_type -495 479 8 1 1180 973 47 0 0 chr15 78067718 78067845 -25427129 + B1_Mus1 SINE Alu 1 127 -21 1 1180 277 299 99 50 chr15 78068059 78068200 -25426774 + MLT1A0 LTR MaLR 214 361 -4 1 1180 2409 176 87 15 chr15 78068219 78068757 -25426217 - RLTR20B3 LTR ERVK 0 577 1 1 1180 180 0 0 0 chr15 78068917 78068937 -25426037 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1180 243 0 0 0 chr15 78069673 78069700 -25425274 + (ATTG)n Simple_repeat Simple_repeat 4 30 0 1 1180 316 325 73 11 chr15 78069702 78069897 -25425077 + MIRb SINE MIR 4 207 -61 1 1180 441 0 0 0 chr15 78070502 78070551 -25424423 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1180 734 240 0 7 chr15 78070557 78070704 -25424270 - RSINE1 SINE B4 -17 148 3 1 1180 527 0 16 0 chr15 78071277 78071340 -25423634 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 1180 251 114 23 0 chr15 78071694 78071738 -25423236 - PB1D10 SINE Alu -1 116 72 1 1180 201 279 0 0 chr15 78072201 78072262 -25422712 + G-rich Low_complexity Low_complexity 1 61 0 1 1180 450 0 0 0 chr15 78072289 78072339 -25422635 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1180 669 172 0 16 chr15 78072435 78072618 -25422356 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1180 570 220 0 0 chr15 78072657 78072834 -25422140 + (TG)n Simple_repeat Simple_repeat 2 178 0 1 1180 340 176 80 13 chr15 78072960 78073035 -25421939 - PB1D10 SINE Alu -22 98 19 1 1180 572 213 47 0 chr15 78072977 78073104 -25421870 - ID_B1 SINE B4 -67 157 25 1 1180 185 344 16 0 chr15 78074985 78075049 -25419925 - L2b LINE L2 -214 3161 3097 1 1180 189 306 89 64 chr15 78075716 78075873 -25419101 - MIRb SINE MIR -100 168 8 1 1180 180 152 0 0 chr15 78078038 78078071 -25416903 + MIR SINE MIR 90 122 -140 1 1180 209 274 9 0 chr15 78078550 78078656 -25416318 + CT-rich Low_complexity Low_complexity 3 109 0 1 1180 736 128 15 0 chr15 78078707 78078840 -25416134 + (TCC)n Simple_repeat Simple_repeat 2 136 0 1 1180 346 270 0 98 chr15 78078853 78078976 -25415998 - PB1D10 SINE Alu -6 111 1 1 1180 257 316 26 0 chr15 78079534 78079610 -25415364 - MLT1J LTR MaLR -324 188 111 1 1180 183 365 113 0 chr15 78079992 78080107 -25414867 + L2b LINE L2 3030 3157 -218 1 1180 232 366 54 0 chr15 78080970 78081063 -25413911 + MER20 DNA MER1_type 89 186 -33 1 1180 249 320 41 0 chr15 78082815 78082912 -25412062 - MER5B DNA MER1_type -68 110 10 1 1180 275 132 0 36 chr15 78083030 78083085 -25411889 + (TATATG)n Simple_repeat Simple_repeat 4 56 0 1 1180 372 305 17 39 chr15 78083113 78083294 -25411680 + (TATATG)n Simple_repeat Simple_repeat 4 180 0 1 1180 402 326 0 22 chr15 78083247 78083426 -25411548 + (TG)n Simple_repeat Simple_repeat 2 176 0 1 1180 192 256 0 0 chr15 78084076 78084119 -25410855 + L3 LINE CR1 4331 4373 -116 1 1180 930 204 59 0 chr15 78084651 78084837 -25410137 + ID_B1 SINE B4 12 208 -16 1 1180 199 277 62 0 chr15 78084864 78084929 -25410045 + MIR SINE MIR 59 127 -81 1 1180 517 335 18 0 chr15 78086539 78086709 -25408265 + G-rich Low_complexity Low_complexity 3 175 0 1 1180 816 219 9 2 chr15 78086751 78087203 -25407771 + G-rich Low_complexity Low_complexity 1 455 0 1 1180 855 238 0 0 chr15 78087230 78087550 -25407424 + G-rich Low_complexity Low_complexity 1 320 0 1 1180 368 349 91 0 chr15 78087753 78087885 -25407089 - RSINE1 SINE B4 -20 145 2 1 1180 492 295 29 48 chr15 78088967 78089177 -25405797 + B4 SINE B4 41 246 -46 1 1180 1679 190 98 3 chr15 78089129 78089389 -25405585 - MTD LTR MaLR -14 405 113 1 1180 246 62 0 0 chr15 78089389 78089421 -25405553 + (TAA)n Simple_repeat Simple_repeat 1 32 0 1 1180 1679 190 98 3 chr15 78089421 78089529 -25405445 - MTD LTR MaLR -307 112 3 1 1180 1460 86 5 9 chr15 78089559 78089770 -25405204 - L1Md_F2 LINE L1 0 6582 6373 1 1180 704 42 63 0 chr15 78089770 78089865 -25405109 + L1Md_F2 LINE L1 6244 6344 -238 1 1180 257 296 21 54 chr15 78089865 78089958 -25405016 + B4 SINE B4 203 292 0 1 1180 234 321 59 29 chr15 78089948 78090118 -25404856 - RLTR22_Mur LTR ERVK -387 1461 1287 1 1180 229 329 12 12 chr15 78090451 78090534 -25404440 + GA-rich Low_complexity Low_complexity 3 85 0 1 1180 253 383 50 33 chr15 78090621 78090802 -25404172 - MTEb LTR MaLR 0 379 196 1 1180 21 0 0 0 chr15 78090809 78090830 -25404144 + AT_rich Low_complexity Low_complexity 1 21 0 1 1180 180 286 165 0 chr15 78091477 78091610 -25403364 - L2 LINE L2 -2800 619 465 1 1180 279 0 0 0 chr15 78091666 78091697 -25403277 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1180 453 256 34 4 chr15 78091858 78092123 -25402851 + (CA)n Simple_repeat Simple_repeat 1 273 0 1 1180 232 333 0 0 chr15 78093278 78093338 -25401636 + L1M4b LINE L1 260 319 -7015 1 1180 400 336 104 94 chr15 78093439 78093813 -25401161 - MLT1B LTR MaLR -12 378 1 1 1180 380 315 101 65 chr15 78094123 78094401 -25400573 + B4 SINE B4 5 292 0 1 1180 2849 128 9 67 chr15 78094633 78095168 -25399806 + RLTR28 LTR ERVL 4 507 -17 1 1180 315 299 59 53 chr15 78095582 78095769 -25399205 + L1M4b LINE L1 1215 1402 -5932 1 1180 1620 181 37 24 chr15 78095803 78096148 -25398826 + RLTR41 LTR ERV1 62 446 0 1 1180 353 262 122 8 chr15 78096169 78096292 -25398682 + L1M4b LINE L1 1427 1563 -5771 1 1180 1295 116 5 31 chr15 78096294 78096490 -25398484 + B2_Mm1t SINE B2 1 191 -2 1 1180 1588 111 57 4 chr15 78096573 78096694 -25398280 - Lx LINE L1 -1 6653 6534 1 1180 207 0 0 0 chr15 78096694 78096717 -25398257 + (CCCA)n Simple_repeat Simple_repeat 3 25 0 1 1180 1588 111 57 4 chr15 78096717 78096839 -25398135 - Lx LINE L1 -121 6533 6398 1 1180 552 257 208 9 chr15 78096925 78097141 -25397833 + Lx8 LINE L1 7061 7319 -154 1 1180 215 200 0 0 chr15 78097515 78097550 -25397424 + polypyrimidine Low_complexity Low_complexity 2 36 0 1 1180 227 36 0 0 chr15 78097560 78097588 -25397386 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1180 273 89 0 0 chr15 78097588 78097633 -25397341 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 1180 612 254 58 119 chr15 78097634 78097929 -25397045 - B4 SINE B4 0 292 16 1 1180 744 300 134 28 chr15 78098663 78098742 -25396232 - Lx8 LINE L1 -1212 6261 6182 1 1180 234 105 0 0 chr15 78098742 78098780 -25396194 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 1 1180 744 300 134 28 chr15 78098780 78099198 -25395776 - Lx8 LINE L1 -1292 6181 5711 1 1180 1460 306 80 17 chr15 78099286 78099862 -25395112 + Lx8 LINE L1 6328 6939 -534 1 1180 420 20 0 0 chr15 78099863 78099912 -25395062 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1180 834 327 53 14 chr15 78099943 78100292 -25394682 + Lx8 LINE L1 7026 7400 -73 1 1180 264 336 40 73 chr15 78100367 78100518 -25394456 + RMER12 LTR ERVK 711 856 -466 1 1180 632 233 11 0 chr15 78100518 78100694 -25394280 + (TATG)n Simple_repeat Simple_repeat 1 178 0 1 1180 749 110 8 0 chr15 78100794 78100912 -25394062 + (TC)n Simple_repeat Simple_repeat 2 120 0 1 1180 335 284 13 11 chr15 78100949 78101069 -25393905 - B4A SINE B4 -169 123 3 1 1180 259 358 53 35 chr15 78101085 78101127 -25393847 + L1M5 LINE L1 3977 4022 -2124 1 1180 614 263 72 48 chr15 78101127 78101335 -25393639 - B3 SINE B2 -2 214 2 1 1180 259 358 53 35 chr15 78101335 78101576 -25393398 + L1M5 LINE L1 4023 4265 -1881 1 1180 566 153 25 0 chr15 78101793 78101956 -25393018 + (CA)n Simple_repeat Simple_repeat 1 167 0 1 1180 501 300 15 0 chr15 78101975 78102105 -25392869 + ID_B1 SINE B4 92 223 -1 1 1180 1492 264 32 12 chr15 78102247 78102654 -25392320 + MTD LTR MaLR 5 419 0 1 1180 377 290 83 0 chr15 78102655 78102800 -25392174 + MTD-int LTR MaLR 3 159 -1421 1 1180 527 238 54 16 chr15 78102850 78103034 -25391940 + MTD-int LTR MaLR 1066 1256 -2 1 1180 1551 255 38 6 chr15 78103036 78103447 -25391527 + MTD LTR MaLR 1 419 -2 1 1180 447 68 0 0 chr15 78103925 78103984 -25390990 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 1180 288 355 74 8 chr15 78103985 78104107 -25390867 - B3A SINE B2 -41 157 28 1 1180 326 230 46 0 chr15 78104134 78104221 -25390753 - L1MA7 LINE L1 -359 5932 5842 1 1180 255 252 80 80 chr15 78105680 78105818 -25389156 + RMER15 LTR ERVL 421 558 -17 1 1180 607 256 149 0 chr15 78106014 78106182 -25388792 - ID_B1 SINE B4 -9 215 23 1 1180 990 156 0 0 chr15 78106191 78106364 -25388610 + GA-rich Low_complexity Low_complexity 2 174 0 1 1180 321 162 56 42 chr15 78106393 78106464 -25388510 + B3A SINE B2 1 72 -126 2 1180 890 157 84 0 chr15 78107069 78107247 -25387727 - RLTR11A LTR ERVK -2 526 334 2 1180 244 316 87 69 chr15 78107279 78107510 -25387464 - B4A SINE B4 -11 281 47 2 1180 277 308 80 36 chr15 78107527 78107665 -25387309 - MLT1B LTR MaLR -215 175 32 2 1180 1472 248 24 19 chr15 78107952 78108322 -25386652 - MTEa LTR MaLR -6 373 2 2 1180 458 222 93 0 chr15 78109589 78109697 -25385277 - PB1D9 SINE Alu 0 120 3 2 1180 1092 261 13 47 chr15 78110288 78110586 -25384388 + B4 SINE B4 5 292 0 2 1180 680 270 41 5 chr15 78111898 78112095 -25382879 - Lx8 LINE L1 -393 7080 6877 2 1180 355 272 116 14 chr15 78112537 78112675 -25382299 - L1MC LINE L1 -1155 4991 4840 2 1180 327 193 193 0 chr15 78112725 78112808 -25382166 - Lx4B LINE L1 -4 7054 6956 2 1180 858 83 0 0 chr15 78114367 78114500 -25380474 + (GA)n Simple_repeat Simple_repeat 1 133 0 2 1180 206 250 0 40 chr15 78114503 78114553 -25380421 + G-rich Low_complexity Low_complexity 2 49 0 2 1181 864 219 156 59 chr15 78119511 78119679 -25375295 + ORR1D1 LTR MaLR 1 201 -173 2 1181 657 230 14 14 chr15 78119679 78119820 -25375154 + B1_Mus2 SINE Alu 5 145 -2 2 1181 864 219 156 59 chr15 78119820 78119991 -25374983 + ORR1D1 LTR MaLR 202 373 -1 2 1181 27 0 0 0 chr15 78120126 78120153 -25374821 + AT_rich Low_complexity Low_complexity 1 27 0 2 1181 214 246 87 13 chr15 78120234 78120312 -25374662 - MIRm SINE MIR -74 194 111 2 1181 203 192 58 0 chr15 78121206 78121258 -25373716 + (TCTCTG)n Simple_repeat Simple_repeat 3 57 0 2 1181 1706 111 103 3 chr15 78121295 78121585 -25373389 + ORR1A2 LTR MaLR 1 319 -8 2 1181 368 361 186 9 chr15 78121608 78121823 -25373151 - B4A SINE B4 -27 265 13 2 1181 229 217 29 0 chr15 78125030 78125099 -25369875 + (CA)n Simple_repeat Simple_repeat 2 72 0 2 1181 343 247 6 6 chr15 78125112 78125287 -25369687 + (CA)n Simple_repeat Simple_repeat 2 176 0 2 1181 306 120 0 39 chr15 78125288 78125340 -25369634 + HAL1-3A_ME LINE L1 1976 2025 -833 2 1181 513 104 0 0 chr15 78126053 78126130 -25368844 + (CA)n Simple_repeat Simple_repeat 1 77 0 2 1181 662 224 14 0 chr15 78127625 78127768 -25367206 - B1_Mur3 SINE Alu 0 149 5 2 1181 811 158 43 10 chr15 78129374 78129792 -25365182 + (TCTA)n Simple_repeat Simple_repeat 1 432 0 2 1181 447 272 83 36 chr15 78129797 78130053 -25364921 - MLT1A0 LTR MaLR -42 323 1 2 1181 219 278 146 0 chr15 78130236 78130380 -25364594 - MIRb SINE MIR -98 170 6 2 1181 1108 237 47 11 chr15 78131344 78131621 -25363353 + B4 SINE B4 2 288 -4 2 1181 330 278 103 59 chr15 78132112 78132315 -25362659 + B4A SINE B4 13 224 -68 2 1181 964 50 8 0 chr15 78132196 78132317 -25362657 + B1_Mus1 SINE Alu 27 148 0 2 1181 270 110 27 27 chr15 78132334 78132409 -25362565 + (CAAA)n Simple_repeat Simple_repeat 2 76 0 2 1181 245 226 12 0 chr15 78133447 78133531 -25361443 + (CA)n Simple_repeat Simple_repeat 2 86 0 2 1181 957 159 158 5 chr15 78134099 78134295 -25360679 - URR1A DNA MER1_type 0 226 1 2 1181 1086 55 0 0 chr15 78135100 78135246 -25359728 + (TG)n Simple_repeat Simple_repeat 2 147 0 2 1181 257 143 18 79 chr15 78135247 78135361 -25359613 + (CAGAGA)n Simple_repeat Simple_repeat 2 108 0 2 1181 180 111 0 0 chr15 78135368 78135395 -25359579 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1181 209 310 49 20 chr15 78136224 78136326 -25358648 + L2b LINE L2 3074 3178 -197 2 1181 207 69 0 0 chr15 78136733 78136762 -25358212 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2 1181 477 154 132 43 chr15 78138145 78138265 -25356709 - PB1D9 SINE Alu -11 139 9 2 1181 897 234 131 19 chr15 78138239 78138527 -25356447 + MTD LTR MaLR 74 400 -21 2 1181 221 232 0 18 chr15 78139968 78140025 -25354949 + (TCTCTG)n Simple_repeat Simple_repeat 6 61 0 2 1181 918 145 0 22 chr15 78140049 78140232 -25354742 + CT-rich Low_complexity Low_complexity 1 179 0 2 1181 249 159 0 0 chr15 78140230 78140293 -25354681 + (TCTCTG)n Simple_repeat Simple_repeat 2 64 0 2 1181 1662 156 77 57 chr15 78140869 78141271 -25353703 - RMER17C LTR ERVK 0 410 1 2 1181 468 277 129 11 chr15 78141550 78141736 -25353238 + MER76 LTR ERVL 388 595 -96 2 1181 840 257 137 0 chr15 78142631 78142872 -25352102 - MTEa LTR MaLR -101 278 5 2 1181 259 298 67 18 chr15 78144091 78144255 -25350719 - L1MB3 LINE L1 -212 5971 5800 2 1181 786 22 0 0 chr15 78144837 78144929 -25350045 + (TC)n Simple_repeat Simple_repeat 1 92 0 2 1181 494 248 47 33 chr15 78144990 78145140 -25349834 - HAL1-2a_MD LINE L1 -551 2473 2322 2 1181 336 330 71 52 chr15 78145143 78145354 -25349620 - L1MC4 LINE L1 -1032 7010 6796 2 1181 327 49 0 0 chr15 78145419 78145460 -25349514 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 2 1181 710 220 7 7 chr15 78145762 78145904 -25349070 + B1_Mur1 SINE Alu 1 142 -7 2 1181 445 288 52 35 chr15 78145885 78146109 -25348865 + MLT1B LTR MaLR 82 305 -162 2 1181 265 339 0 0 chr15 78146153 78146218 -25348756 + RMER12B LTR ERVK 10 74 -1330 2 1181 3411 158 46 88 chr15 78146185 78146923 -25348051 + RMER12B LTR ERVK 241 947 -457 2 1181 324 0 0 0 chr15 78146923 78146959 -25348015 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 2 1181 314 340 71 52 chr15 78147024 78147235 -25347739 + L1MC4 LINE L1 6796 7010 -1032 2 1181 536 253 29 91 chr15 78147238 78147447 -25347527 + HAL1-2a_MD LINE L1 2322 2517 -507 2 1181 214 100 0 57 chr15 78147527 78147570 -25347404 + (CAGA)n Simple_repeat Simple_repeat 3 43 0 2 1181 486 0 0 0 chr15 78147570 78147624 -25347350 + (GA)n Simple_repeat Simple_repeat 1 54 0 2 1181 214 100 0 57 chr15 78147624 78147633 -25347341 + (CAGA)n Simple_repeat Simple_repeat 4 12 0 2 1181 296 286 67 18 chr15 78148206 78148370 -25346604 + L1MB3 LINE L1 5800 5971 -212 2 1181 859 262 131 0 chr15 78149587 78149831 -25345143 + MTEa LTR MaLR 5 280 -99 2 1181 419 326 130 44 chr15 78150662 78151180 -25343794 - MER76 LTR ERVL -30 661 72 2 1181 230 240 20 0 chr15 78151722 78151772 -25343202 + GA-rich Low_complexity Low_complexity 4 54 0 2 1181 264 100 0 0 chr15 78151772 78151812 -25343162 + (GGGGA)n Simple_repeat Simple_repeat 4 43 0 2 1181 207 0 0 0 chr15 78152634 78152657 -25342317 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1181 811 261 125 20 chr15 78153294 78153613 -25341361 - MTD LTR MaLR -31 390 46 2 1181 477 153 131 42 chr15 78153566 78153684 -25341290 + PB1D9 SINE Alu 9 137 -13 2 1181 228 330 33 11 chr15 78153672 78153764 -25341210 - MTD LTR MaLR -326 95 2 2 1181 341 313 65 16 chr15 78154926 78155111 -25339863 - MER96B DNA hAT -210 207 14 2 1181 4868 77 0 0 chr15 78155113 78155735 -25339239 - L1Md_T LINE L1 0 6582 5961 2 1181 291 54 0 0 chr15 78155771 78155808 -25339166 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 2 1181 217 323 29 59 chr15 78156084 78156186 -25338788 - MIRb SINE MIR -141 127 29 2 1181 264 287 59 25 chr15 78156211 78156329 -25338645 - L2b LINE L2 -197 3178 3057 2 1181 478 141 16 16 chr15 78157147 78157270 -25337704 + (TCTCTG)n Simple_repeat Simple_repeat 4 126 0 2 1181 462 101 0 0 chr15 78157272 78157341 -25337633 + (CA)n Simple_repeat Simple_repeat 1 69 0 2 1181 1194 114 27 5 chr15 78157748 78157933 -25337041 - B2_Mm1a SINE B2 -3 190 2 2 1181 948 158 153 0 chr15 78158352 78158548 -25336426 + URR1A DNA MER1_type 1 226 0 2 1181 279 322 0 11 chr15 78159087 78159175 -25335799 + (TG)n Simple_repeat Simple_repeat 1 87 0 2 1181 615 117 0 0 chr15 78160205 78160299 -25334675 + (TC)n Simple_repeat Simple_repeat 2 95 0 2 1181 222 37 0 0 chr15 78160336 78160363 -25334611 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2 1181 841 43 43 17 chr15 78160363 78160471 -25334503 - B1_Mus1 SINE Alu -9 139 27 2 1181 324 262 104 50 chr15 78160471 78160555 -25334419 - B4A SINE B4 -74 218 13 2 1181 1037 236 9 101 chr15 78161046 78161362 -25333612 - B4 SINE B4 -4 288 2 2 1181 309 302 94 0 chr15 78162286 78162382 -25332592 - PB1 SINE Alu -2 125 21 2 1181 466 391 12 53 chr15 78162838 78163081 -25331893 - MLT1J LTR MaLR -185 327 95 2 1181 186 43 0 0 chr15 78163339 78163362 -25331612 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1181 216 292 92 0 chr15 78163537 78163657 -25331317 + MIR SINE MIR 8 138 -124 2 1181 561 299 67 14 chr15 78163854 78164130 -25330844 + MLT1A0 LTR MaLR 1 345 -20 2 1181 689 104 47 0 chr15 78164570 78164782 -25330192 + (TAGA)n Simple_repeat Simple_repeat 1 222 0 2 1181 222 330 21 0 chr15 78164818 78164915 -25330059 + (TGGA)n Simple_repeat Simple_repeat 4 102 0 2 1181 641 213 21 7 chr15 78166533 78166675 -25328299 + B1_Mur3 SINE Alu 5 148 -1 2 1181 348 80 0 0 chr15 78168839 78168889 -25326085 - HAL1-3A_ME LINE L1 -833 2025 1976 2 1181 245 269 0 7 chr15 78168924 78169074 -25325900 + (TG)n Simple_repeat Simple_repeat 2 150 0 2 1181 180 179 0 0 chr15 78169121 78169160 -25325814 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1181 288 328 169 16 chr15 78172335 78172524 -25322450 + B4 SINE B4 2 219 -73 2 1181 2042 114 13 0 chr15 78172586 78172901 -25322073 - ORR1A2 LTR MaLR -8 319 1 2 1181 248 53 26 0 chr15 78173527 78173565 -25321409 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1181 190 254 88 15 chr15 78173947 78174015 -25320959 + MIRm SINE MIR 111 183 -93 2 1181 487 209 172 25 chr15 78174243 78174400 -25320574 - ORR1D1 LTR MaLR 0 374 195 2 1181 293 109 18 0 chr15 78174407 78174462 -25320512 + (TTGG)n Simple_repeat Simple_repeat 4 59 0 2 1181 389 285 100 0 chr15 78174466 78174596 -25320378 - B1_Mur3 SINE Alu -2 147 5 2 1181 518 197 147 33 chr15 78174592 78174776 -25320198 - ORR1D1 LTR MaLR -169 205 1 2 1181 1055 82 0 7 chr15 78179917 78180064 -25314910 + B1_Mm SINE Alu 2 147 0 2 1181 522 57 0 0 chr15 78181431 78181501 -25313473 + (TG)n Simple_repeat Simple_repeat 2 71 0 3 1181 350 235 1 62 chr15 78181593 78181715 -25313259 + Lx4B LINE L1 6886 7054 -4 3 1181 304 308 179 11 chr15 78181715 78181899 -25313075 + L1M4 LINE L1 4788 5002 -1144 3 1181 721 276 41 5 chr15 78183004 78183201 -25311773 + Lx8 LINE L1 6877 7080 -393 3 1181 1291 81 49 0 chr15 78184106 78184291 -25310683 + B2_Mm2 SINE B2 2 195 0 3 1181 584 339 68 16 chr15 78184352 78184661 -25310313 + MER68 LTR ERVL 87 411 -152 3 1181 577 305 0 0 chr15 78185218 78185372 -25309602 - RSINE1 SINE B4 0 165 12 3 1181 528 59 0 0 chr15 78185469 78185537 -25309437 + (TTCTC)n Simple_repeat Simple_repeat 3 70 0 3 1181 1016 93 99 0 chr15 78185537 78185699 -25309275 - B2_Mm2 SINE B2 -16 179 2 3 1181 1353 123 34 0 chr15 78186167 78186403 -25308571 - L1_Mur2 LINE L1 -6373 339 96 3 1181 264 226 0 0 chr15 78186792 78186845 -25308129 + GA-rich Low_complexity Low_complexity 1 53 0 3 1181 582 168 0 0 chr15 78186867 78186980 -25307994 + GA-rich Low_complexity Low_complexity 3 115 0 3 1181 820 183 7 0 chr15 78187007 78187160 -25307814 + ORR1B2 LTR MaLR 1 154 -213 3 1181 231 146 0 24 chr15 78187157 78187199 -25307775 + ORR1B2 LTR MaLR 346 386 -8 3 1181 6325 204 40 22 chr15 78187203 78188684 -25306290 + ORR1B2-int LTR MaLR 1 1509 0 3 1181 1546 228 63 6 chr15 78188684 78189019 -25305955 + ORR1B2 LTR MaLR 1 354 -13 3 1181 261 254 53 86 chr15 78189435 78189586 -25305388 + L1_Mur2 LINE L1 892 1037 -6691 3 1181 3128 195 55 5 chr15 78189609 78190458 -25304516 + L1_Mur2 LINE L1 1158 2049 -3828 3 1181 3772 174 123 76 chr15 78191985 78192167 -25302807 - RLTR25B LTR ERVK 0 1028 820 3 1181 804 88 0 0 chr15 78192167 78192281 -25302693 + (TC)n Simple_repeat Simple_repeat 1 114 0 3 1181 3772 174 123 76 chr15 78192281 78192582 -25302392 - RLTR25B LTR ERVK -209 819 478 3 1181 771 69 0 0 chr15 78192582 78192684 -25302290 + (GGAA)n Simple_repeat Simple_repeat 3 104 0 3 1181 3772 174 123 76 chr15 78192684 78193178 -25301796 - RLTR25B LTR ERVK -551 477 4 3 1181 248 314 42 8 chr15 78193450 78193569 -25301405 + L1M2 LINE L1 5790 5912 -400 3 1181 2877 131 84 8 chr15 78194619 78195097 -25299877 - Lx4A LINE L1 -371 6687 6174 3 1181 2553 179 35 46 chr15 78195356 78195878 -25299096 - RMER1B Other Other 0 1066 551 3 1181 322 215 22 23 chr15 78196067 78196170 -25298804 + RLTR22_Mur LTR ERVK 1 108 -1700 3 1181 711 65 0 0 chr15 78196170 78196263 -25298711 + (TG)n Simple_repeat Simple_repeat 1 93 0 3 1181 3462 141 23 5 chr15 78196265 78196879 -25298095 + RLTR22_Mur LTR ERVK 179 803 -1045 3 1181 21 0 0 0 chr15 78196887 78196908 -25298066 + AT_rich Low_complexity Low_complexity 1 21 0 3 1181 1096 183 30 46 chr15 78197074 78197337 -25297637 + RLTR22_Mur LTR ERVK 1590 1848 0 3 1181 1132 301 104 40 chr15 78197666 78197686 -25297288 - MLT2B3 LTR ERVL -4 550 539 3 1181 1292 176 18 0 chr15 78197686 78197907 -25297067 - URR1B DNA MER1_type 0 225 1 3 1181 1132 301 104 40 chr15 78197907 78198387 -25296587 - MLT2B3 LTR ERVL -16 538 18 3 1181 394 288 140 11 chr15 78198830 78199009 -25295965 + B3 SINE B2 2 203 -13 3 1181 216 0 0 0 chr15 78199070 78199094 -25295880 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 3 1181 621 209 15 22 chr15 78199095 78199232 -25295742 - B1_Mur2 SINE Alu -13 136 1 3 1181 234 304 0 145 chr15 78199118 78199249 -25295725 - MT2B LTR ERVL -337 264 153 3 1181 289 305 10 40 chr15 78199579 78199678 -25295296 - MER45A DNA Tip100 -19 159 64 3 1181 598 146 29 0 chr15 78199681 78199784 -25295190 + HY1 scRNA scRNA 5 110 -2 3 1181 206 105 0 26 chr15 78199789 78199828 -25295146 + (GGA)n Simple_repeat Simple_repeat 2 39 0 3 1181 704 316 67 6 chr15 78200134 78200449 -25294525 + MER67B LTR ERV1 46 379 -282 3 1181 695 302 69 0 chr15 78200683 78200885 -25294089 + MTE2b LTR MaLR 1 216 -163 3 1181 547 238 43 6 chr15 78200942 78201103 -25293871 + MTE2b LTR MaLR 208 374 -5 3 1181 744 43 0 0 chr15 78201265 78201357 -25293617 + (TTTC)n Simple_repeat Simple_repeat 2 93 0 3 1181 1100 84 0 0 chr15 78201384 78201526 -25293448 - B1_Mus1 SINE Alu -6 142 1 3 1181 243 88 0 0 chr15 78203248 78203282 -25291692 + (TCC)n Simple_repeat Simple_repeat 2 35 0 3 1181 206 241 0 0 chr15 78203587 78203641 -25291333 + T-rich Low_complexity Low_complexity 1 54 0 3 1181 349 243 117 0 chr15 78203643 78203746 -25291228 - PB1D10 SINE Alu 0 117 3 3 1181 357 212 94 0 chr15 78203666 78203751 -25291223 - ID_B1 SINE B4 -53 171 79 3 1181 673 194 8 0 chr15 78203942 78204066 -25290908 + RMER20A LTR ERVK 392 516 0 3 1181 1018 226 139 36 chr15 78205276 78205537 -25289437 + MTEa LTR MaLR 1 268 -111 3 1181 213 39 0 0 chr15 78205537 78205563 -25289411 + (CCCCCT)n Simple_repeat Simple_repeat 5 30 0 3 1181 1018 226 139 36 chr15 78205563 78205631 -25289343 + MTEa LTR MaLR 269 364 -15 3 1181 631 271 181 61 chr15 78206416 78206762 -25288212 + RLTR12B LTR ERVK 47 446 -82 3 1181 1548 26 11 0 chr15 78206762 78206951 -25288023 - B2_Mm1a SINE B2 -2 191 1 3 1181 631 271 181 61 chr15 78206951 78206997 -25287977 + RLTR12B LTR ERVK 447 486 -42 3 1181 486 0 0 0 chr15 78207028 78207082 -25287892 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 1181 296 359 98 45 chr15 78207628 78207873 -25287101 + MLT1H2 LTR MaLR 3 260 -229 3 1181 607 312 124 19 chr15 78209493 78209800 -25285174 - MTE2a-int LTR MaLR -1226 354 16 3 1181 402 242 18 32 chr15 78209824 78209964 -25285010 - MTE2a LTR MaLR -13 406 270 3 1181 294 250 30 172 chr15 78209962 78210131 -25284843 - MTE2a LTR MaLR -234 145 1 3 1181 249 33 0 0 chr15 78210166 78210196 -25284778 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1181 557 304 191 44 chr15 78210417 78210898 -25284076 + L1MEe LINE L1 541 1092 -3762 3 1181 629 279 7 0 chr15 78210903 78211050 -25283924 + RSINE1 SINE B4 2 149 -16 3 1181 192 97 0 0 chr15 78211053 78211084 -25283890 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1181 216 0 0 0 chr15 78211092 78211116 -25283858 + (GA)n Simple_repeat Simple_repeat 2 25 0 3 1181 560 59 12 0 chr15 78212282 78212367 -25282607 + (TG)n Simple_repeat Simple_repeat 2 87 0 3 1181 225 330 124 64 chr15 78213043 78213276 -25281698 + ORR1E LTR MaLR 6 252 -107 3 1181 457 257 0 9 chr15 78213389 78213499 -25281475 - B1F SINE Alu -1 148 40 3 1181 265 358 0 0 chr15 78213502 78213611 -25281363 + C-rich Low_complexity Low_complexity 6 114 0 3 1181 345 267 27 51 chr15 78213556 78213889 -25281085 + SUBTEL_sa Satellite Satellite 1 324 -13 3 1181 331 211 0 0 chr15 78213915 78213972 -25281002 - B1F2 SINE Alu -92 57 1 3 1181 266 250 0 106 chr15 78213972 78214003 -25280971 - B4 SINE B4 -207 85 64 3 1181 236 330 9 46 chr15 78215276 78215384 -25279590 - MIRb SINE MIR -109 159 56 3 1181 193 285 68 0 chr15 78216085 78216181 -25278793 - MIRc SINE MIR -52 156 59 3 1181 953 232 53 19 chr15 78217704 78217911 -25277063 - B3 SINE B2 0 216 3 3 1181 450 36 0 0 chr15 78217970 78218026 -25276948 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 1181 575 127 34 0 chr15 78219468 78219586 -25275388 + (ATAGG)n Simple_repeat Simple_repeat 4 125 0 3 1181 911 92 26 33 chr15 78219582 78219862 -25275112 + (TGGA)n Simple_repeat Simple_repeat 1 277 0 3 1181 180 0 0 0 chr15 78220508 78220528 -25274446 + (CACCC)n Simple_repeat Simple_repeat 3 22 0 3 1181 1400 202 41 72 chr15 78221465 78221854 -25273120 - MTE2a LTR MaLR 0 379 3 3 1181 618 14 0 0 chr15 78221879 78221950 -25273024 + (GA)n Simple_repeat Simple_repeat 2 72 0 3 1181 324 206 16 0 chr15 78222067 78222130 -25272844 + ID4 SINE ID 16 79 -4 3 1181 364 325 99 84 chr15 78222153 78222516 -25272458 + MLT1F2 LTR MaLR 9 363 -197 3 1181 27 0 0 0 chr15 78222761 78222788 -25272186 + AT_rich Low_complexity Low_complexity 1 27 0 3 1181 433 294 124 34 chr15 78222892 78223159 -25271815 + MLT1F-int LTR MaLR 2 292 -1197 3 1181 622 240 68 14 chr15 78223226 78223374 -25271600 + RSINE1 SINE B4 6 161 -4 3 1181 210 37 0 0 chr15 78223374 78223401 -25271573 + (TCTG)n Simple_repeat Simple_repeat 4 30 0 3 1181 830 294 94 4 chr15 78223485 78223751 -25271223 + B4 SINE B4 1 290 -2 3 1181 429 271 0 0 chr15 78223770 78223947 -25271027 + (CA)n Simple_repeat Simple_repeat 2 178 0 3 1181 1200 139 8 168 chr15 78224069 78224337 -25270637 + URR1A DNA MER1_type 1 225 -1 3 1181 393 306 73 10 chr15 78225188 78225364 -25269610 + MLT1F2 LTR MaLR 412 680 0 3 1181 2439 161 5 5 chr15 78225381 78225757 -25269217 + ORR1C1 LTR MaLR 2 377 -1 3 1181 191 289 50 50 chr15 78226613 78226693 -25268281 - L2b LINE L2 -201 3174 3095 3 1181 338 263 0 48 chr15 78227030 78227134 -25267840 - PB1D10 SINE Alu -4 113 15 3 1181 4005 52 37 20 chr15 78227200 78227709 -25267265 + MURVY-LTR LTR ERV1 2 519 0 3 1181 287 306 159 39 chr15 78227796 78228123 -25266851 - MLT1F2 LTR MaLR -138 431 59 3 1181 324 364 43 22 chr15 78228155 78228385 -25266589 + L2 LINE L2 2762 2996 -423 3 1181 605 151 8 0 chr15 78228849 78228968 -25266006 + RMER17A2 LTR ERVK 394 513 -393 3 1181 206 225 0 0 chr15 78229257 78229297 -25265677 + CT-rich Low_complexity Low_complexity 1 40 0 3 1181 636 279 40 6 chr15 78229532 78229705 -25265269 + RMER15 LTR ERVL 304 482 -93 3 1181 425 165 71 0 chr15 78229803 78229888 -25265086 + RMER15 LTR ERVL 483 573 -2 3 1181 180 0 0 0 chr15 78230015 78230035 -25264939 + (GGGA)n Simple_repeat Simple_repeat 3 22 0 3 1181 219 389 17 26 chr15 78230730 78230846 -25264128 + MIR SINE MIR 92 206 -56 3 1181 218 320 61 20 chr15 78230979 78231078 -25263896 - MIRm SINE MIR -128 148 46 3 1181 605 226 22 0 chr15 78231391 78231528 -25263446 + B1F SINE Alu 9 148 -1 3 1181 285 29 0 0 chr15 78232229 78232263 -25262711 + (TCTG)n Simple_repeat Simple_repeat 4 37 0 3 1181 642 250 102 6 chr15 78232323 78232500 -25262474 - B4 SINE B4 -98 194 1 3 1181 232 159 0 24 chr15 78233423 78233477 -25261497 - MIRc SINE MIR -117 151 96 3 1181 183 235 19 38 chr15 78234126 78234179 -25260795 - MIRm SINE MIR -189 87 36 3 1181 184 328 0 16 chr15 78234223 78234285 -25260689 + MIR SINE MIR 88 148 -60 3 1181 474 49 0 0 chr15 78234774 78234835 -25260139 + (GA)n Simple_repeat Simple_repeat 1 61 0 3 1181 810 259 51 75 chr15 78238719 78239011 -25255963 + B4 SINE B4 4 288 -4 3 1181 336 48 0 0 chr15 78239023 78239065 -25255909 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1181 559 165 151 34 chr15 78239318 78239437 -25255537 - B1_Mur4 SINE Alu -17 133 1 3 1181 445 209 103 17 chr15 78239752 78239869 -25255105 - B1F1 SINE Alu -1 148 22 3 1181 241 297 25 67 chr15 78239791 78239910 -25255064 - MT2B LTR ERVL -338 263 150 4 1181 225 288 13 27 chr15 78241446 78241521 -25253453 + RMER19A LTR ERVK 520 593 -144 4 1181 291 252 114 19 chr15 78241776 78241876 -25253098 + MER2 DNA MER2_type 92 201 -144 4 1181 719 146 33 0 chr15 78241876 78242013 -25252961 + B1F SINE Alu 1 141 -8 4 1181 336 48 0 0 chr15 78244314 78244356 -25250618 + (GGGA)n Simple_repeat Simple_repeat 1 42 0 4 1181 1019 233 89 50 chr15 78244695 78244975 -25249999 - B4 SINE B4 0 292 2 4 1181 258 32 0 0 chr15 78245206 78245237 -25249737 + (TAA)n Simple_repeat Simple_repeat 2 32 0 4 1181 426 296 36 29 chr15 78245240 78245379 -25249595 + RSINE1 SINE B4 6 145 -20 4 1181 465 110 0 0 chr15 78245379 78245452 -25249522 + (CA)n Simple_repeat Simple_repeat 1 73 0 4 1181 432 0 0 0 chr15 78246622 78246670 -25248304 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1181 574 192 63 8 chr15 78246691 78246817 -25248157 - RSINE1 SINE B4 -31 134 2 4 1181 208 246 56 28 chr15 78246988 78247059 -25247915 - MIRc SINE MIR -114 154 82 4 1181 561 159 168 0 chr15 78247844 78247957 -25247017 + B1_Mus1 SINE Alu 1 132 -16 4 1181 822 38 0 0 chr15 78247957 78248063 -25246911 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 4 1181 246 289 23 57 chr15 78248090 78248178 -25246796 + MT2B2 LTR ERVL 168 252 -332 4 1181 494 206 52 0 chr15 78248420 78248517 -25246457 + PB1D10 SINE Alu 5 106 -11 4 1181 235 320 0 26 chr15 78248542 78248619 -25246355 - B3 SINE B2 -41 175 101 4 1181 334 188 24 36 chr15 78248603 78248686 -25246288 - B2_Mm2 SINE B2 -113 82 1 4 1181 222 37 0 0 chr15 78248687 78248714 -25246260 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 4 1181 222 258 16 0 chr15 78248771 78248833 -25246141 + (TAA)n Simple_repeat Simple_repeat 3 65 0 4 1181 309 51 0 0 chr15 78249180 78249219 -25245755 + (CAAT)n Simple_repeat Simple_repeat 1 39 0 4 1181 441 0 0 0 chr15 78249787 78249836 -25245138 + (TGG)n Simple_repeat Simple_repeat 3 51 0 4 1182 413 271 30 18 chr15 78250033 78250202 -25244772 + (ATGGTG)n Simple_repeat Simple_repeat 5 175 0 4 1182 535 288 25 6 chr15 78250398 78250559 -25244415 - ID_B1 SINE B4 -3 221 58 4 1182 278 261 115 0 chr15 78250620 78250750 -25244224 + L1MC4 LINE L1 6934 7078 -964 4 1182 213 121 0 0 chr15 78250817 78250850 -25244124 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 4 1182 429 246 5 3 chr15 78251254 78251370 -25243604 + PB1D10 SINE Alu 1 117 -32 4 1182 295 219 12 0 chr15 78251803 78251885 -25243089 + (TTG)n Simple_repeat Simple_repeat 2 84 0 4 1182 31 26 0 0 chr15 78251983 78252021 -25242953 + AT_rich Low_complexity Low_complexity 1 38 0 4 1182 1178 168 46 18 chr15 78252386 78252605 -25242369 - URR1B DNA MER1_type 0 225 1 4 1182 1234 55 35 0 chr15 78253317 78253810 -25241164 + (TTCC)n Simple_repeat Simple_repeat 1 510 0 4 1182 674 150 0 17 chr15 78253837 78253952 -25241022 - B1_Mur1 SINE Alu -35 114 2 4 1182 359 231 0 136 chr15 78253844 78253969 -25241005 - MT2B LTR ERVL -341 260 153 4 1182 271 162 14 42 chr15 78254066 78254137 -25240837 + (CCTA)n Simple_repeat Simple_repeat 1 69 0 4 1182 585 242 23 0 chr15 78254137 78254268 -25240706 - ID_B1 SINE B4 -7 217 84 4 1182 877 186 116 64 chr15 78254268 78254635 -25240339 - RMER19C LTR ERVK 0 611 309 4 1182 225 302 56 13 chr15 78255628 78255724 -25239250 - MIRc SINE MIR -113 163 67 4 1182 295 265 28 14 chr15 78256371 78256468 -25238506 + ORR1E LTR MaLR 2 100 -270 4 1182 253 105 34 34 chr15 78256614 78256673 -25238301 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 4 1182 639 0 0 0 chr15 78256674 78256745 -25238229 + (TCTCC)n Simple_repeat Simple_repeat 2 72 0 4 1182 1332 227 29 79 chr15 78257624 78258002 -25236972 + MTE2a LTR MaLR 21 379 0 4 1182 196 216 122 0 chr15 78258509 78258583 -25236391 + MIRb SINE MIR 165 247 -21 4 1182 28 0 0 0 chr15 78259143 78259171 -25235803 + GC_rich Low_complexity Low_complexity 1 28 0 4 1182 353 279 38 31 chr15 78260174 78260328 -25234646 - MIRc SINE MIR -54 154 1 4 1182 381 43 0 0 chr15 78260352 78260399 -25234575 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1182 182 33 67 0 chr15 78261226 78261256 -25233718 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 4 1182 252 342 17 8 chr15 78262255 78262373 -25232601 - MLT1A0 LTR MaLR -235 130 12 4 1182 332 343 109 14 chr15 78262633 78262843 -25232131 + MIR SINE MIR 19 248 -14 4 1182 954 229 42 0 chr15 78263064 78263278 -25231696 - ID_B1 SINE B4 0 224 2 4 1182 227 79 0 26 chr15 78263535 78263574 -25231400 + (AGGGGG)n Simple_repeat Simple_repeat 4 41 0 4 1182 256 289 48 67 chr15 78264015 78264220 -25230754 + MIRc SINE MIR 53 253 -23 4 1182 262 287 0 25 chr15 78267612 78267730 -25227244 + CT-rich Low_complexity Low_complexity 2 116 0 4 1182 274 184 15 4 chr15 78268524 78268594 -25226380 + MIR SINE MIR 75 149 -119 4 1182 201 352 8 31 chr15 78268773 78268902 -25226072 + C-rich Low_complexity Low_complexity 1 126 0 4 1182 302 258 54 0 chr15 78269278 78269371 -25225603 + MIRc SINE MIR 111 208 -60 4 1182 245 336 58 0 chr15 78270910 78271014 -25223960 + MIRb SINE MIR 67 176 -92 4 1182 183 171 24 24 chr15 78271864 78271906 -25223068 + L2b LINE L2 3328 3369 -6 4 1182 196 178 111 0 chr15 78271942 78271987 -25222987 + MIRc SINE MIR 92 141 -127 4 1182 262 318 120 0 chr15 78272277 78272418 -25222556 + MIR SINE MIR 35 198 -70 4 1182 215 293 42 25 chr15 78273160 78273279 -25221695 + MIR SINE MIR 45 165 -97 4 1182 204 372 0 23 chr15 78273800 78273888 -25221086 + L2b LINE L2 3290 3375 0 4 1182 449 127 13 0 chr15 78275503 78275582 -25219392 + (TGGA)n Simple_repeat Simple_repeat 1 80 0 4 1182 225 0 0 0 chr15 78277051 78277076 -25217898 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 1182 287 291 37 59 chr15 78277409 78277544 -25217430 + L2 LINE L2 2791 2922 -497 4 1182 317 325 68 45 chr15 78277958 78278135 -25216839 + Charlie1b DNA MER1_type 108 288 -235 4 1182 320 314 42 0 chr15 78278467 78278585 -25216389 - Tigger7 DNA MER2_type 0 2491 2369 4 1182 290 230 0 39 chr15 78278606 78278683 -25216291 - Tigger7 DNA MER2_type -2379 112 39 4 1182 315 71 0 0 chr15 78280517 78280559 -25214415 + (TC)n Simple_repeat Simple_repeat 2 43 0 4 1182 549 0 0 0 chr15 78280559 78280620 -25214354 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 1182 331 318 27 104 chr15 78280753 78281141 -25213833 + MLT1A1 LTR MaLR 19 405 -3 4 1182 637 237 0 0 chr15 78281348 78281479 -25213495 - RSINE1 SINE B4 -26 139 9 4 1182 705 24 0 0 chr15 78281489 78281572 -25213402 + (TTTC)n Simple_repeat Simple_repeat 3 85 0 4 1182 203 233 178 0 chr15 78281671 78281744 -25213230 - MIRb SINE MIR -140 128 43 4 1182 216 0 0 0 chr15 78282379 78282403 -25212571 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 1182 224 210 0 17 chr15 78283439 78283506 -25211468 + MIR SINE MIR 114 184 -84 4 1182 291 289 13 13 chr15 78283618 78283695 -25211279 + ID4 SINE ID 1 77 -6 4 1182 364 190 59 6 chr15 78283738 78283907 -25211067 + (CA)n Simple_repeat Simple_repeat 2 179 0 4 1182 302 316 8 41 chr15 78284975 78285097 -25209877 - MIRb SINE MIR -113 155 38 4 1182 218 254 31 31 chr15 78285130 78285195 -25209779 - MIR3 SINE MIR -35 173 109 4 1182 199 288 17 0 chr15 78286695 78286754 -25208220 + MIRb SINE MIR 65 124 -144 4 1182 393 224 101 18 chr15 78287945 78288054 -25206920 - PB1D9 SINE Alu 0 120 3 4 1182 338 281 148 0 chr15 78288174 78288309 -25206665 + Charlie1b DNA MER1_type 41 195 -328 4 1182 356 287 83 0 chr15 78288449 78288557 -25206417 + PB1D10 SINE Alu 1 117 0 4 1182 765 181 43 7 chr15 78288563 78288702 -25206272 + B1_Mur4 SINE Alu 2 145 -5 4 1182 924 51 0 0 chr15 78288807 78288925 -25206049 + (TAGA)n Simple_repeat Simple_repeat 4 121 0 4 1182 203 274 123 0 chr15 78289240 78289313 -25205661 - MER91C DNA Tip100 -22 118 37 4 1182 217 200 0 0 chr15 78290031 78290066 -25204908 + C-rich Low_complexity Low_complexity 1 35 0 4 1182 1041 125 0 0 chr15 78292943 78293257 -25201717 + (TCTA)n Simple_repeat Simple_repeat 1 314 0 4 1182 1619 165 195 0 chr15 78293629 78293962 -25201012 + MTD LTR MaLR 14 411 -8 4 1182 612 91 0 0 chr15 78294305 78294393 -25200581 + (TGGA)n Simple_repeat Simple_repeat 3 90 0 4 1182 266 235 39 13 chr15 78294479 78294634 -25200340 + (TAGA)n Simple_repeat Simple_repeat 3 161 0 4 1182 280 189 34 45 chr15 78294597 78294774 -25200200 + (TGGA)n Simple_repeat Simple_repeat 4 178 0 4 1182 486 91 0 0 chr15 78296401 78296478 -25198496 + (TC)n Simple_repeat Simple_repeat 2 78 0 4 1182 444 316 5 92 chr15 78296942 78297137 -25197837 + B4A SINE B4 1 178 -114 4 1182 235 253 129 59 chr15 78297219 78297320 -25197654 + PB1D7 SINE Alu 7 114 -6 4 1182 375 202 0 0 chr15 78298377 78298466 -25196508 + (CA)n Simple_repeat Simple_repeat 1 89 0 4 1182 422 359 96 14 chr15 78299427 78299522 -25195452 + MER33 DNA MER1_type 22 126 -198 4 1182 1709 120 0 19 chr15 78299522 78299786 -25195188 + L1Md_F2 LINE L1 6324 6582 0 4 1182 422 359 96 14 chr15 78299786 78299970 -25195004 + MER33 DNA MER1_type 127 324 0 4 1182 240 35 0 0 chr15 78300248 78300277 -25194697 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1182 458 270 177 23 chr15 78301604 78301674 -25193300 + MLT1C LTR MaLR 116 187 -280 4 1182 192 77 0 0 chr15 78301674 78301700 -25193274 + (CAGG)n Simple_repeat Simple_repeat 2 27 0 4 1182 388 93 27 0 chr15 78301700 78301775 -25193199 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 1182 458 270 177 23 chr15 78301775 78302003 -25192971 + MLT1C LTR MaLR 188 460 -7 4 1182 924 99 13 7 chr15 78304851 78304941 -25190033 + (GAA)n Simple_repeat Simple_repeat 3 93 0 5 1182 1262 40 17 11 chr15 78304941 78305119 -25189855 + (GGA)n Simple_repeat Simple_repeat 2 180 0 5 1182 924 99 13 7 chr15 78305119 78305180 -25189794 + (GAA)n Simple_repeat Simple_repeat 1 62 0 5 1182 283 315 180 12 chr15 78305435 78305602 -25189372 - MIR SINE MIR -34 228 34 5 1182 224 344 31 0 chr15 78306463 78306559 -25188415 + MIRb SINE MIR 53 151 -117 5 1182 278 175 331 34 chr15 78307135 78307217 -25187757 - RMER30 DNA MER1_type -10 192 90 5 1182 504 0 0 0 chr15 78307217 78307273 -25187701 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1182 278 175 331 34 chr15 78307273 78307338 -25187636 - RMER30 DNA MER1_type -113 89 2 5 1182 237 33 0 0 chr15 78307395 78307425 -25187549 + (CTG)n Simple_repeat Simple_repeat 3 32 0 5 1182 326 215 0 21 chr15 78307729 78307824 -25187150 + GA-rich Low_complexity Low_complexity 1 93 0 5 1182 258 169 123 0 chr15 78307911 78307976 -25186998 + MIRc SINE MIR 107 179 -89 5 1182 252 0 0 0 chr15 78307990 78308018 -25186956 + (TTG)n Simple_repeat Simple_repeat 2 29 0 5 1182 360 315 19 52 chr15 78308121 78308275 -25186699 - B1F SINE Alu 0 149 1 5 1182 236 301 115 34 chr15 78308977 78309125 -25185849 + MER117 DNA MER1_type 26 185 -12 5 1182 225 167 0 0 chr15 78309259 78309301 -25185673 + GA-rich Low_complexity Low_complexity 2 43 0 5 1182 258 32 0 0 chr15 78309720 78309751 -25185223 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1182 199 224 41 0 chr15 78312888 78312937 -25182037 - L2b LINE L2 -22 3353 3303 5 1182 931 122 0 0 chr15 78313351 78313490 -25181484 - B1_Mur3 SINE Alu -1 148 10 5 1182 409 189 16 138 chr15 78313395 78313518 -25181456 - MT2B LTR ERVL -344 257 150 5 1182 275 0 29 0 chr15 78313567 78313602 -25181372 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1182 347 250 11 11 chr15 78314081 78314174 -25180800 - MIRm SINE MIR -132 144 52 5 1182 300 347 40 7 chr15 78314558 78314709 -25180265 - L2b LINE L2 0 3375 3220 5 1182 276 279 34 0 chr15 78317152 78317299 -25177675 + CT-rich Low_complexity Low_complexity 2 153 0 5 1182 381 22 0 0 chr15 78318806 78318852 -25176122 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1182 332 259 12 12 chr15 78318872 78318954 -25176020 - MER58A DNA MER1_type -142 82 1 5 1182 378 287 63 46 chr15 78319584 78319759 -25175215 - MIR SINE MIR -57 211 34 5 1182 295 274 41 31 chr15 78319983 78320081 -25174893 + MIR SINE MIR 32 130 -78 5 1182 257 303 97 0 chr15 78320121 78320247 -25174727 - MIR SINE MIR -60 208 60 5 1182 405 102 0 0 chr15 78320533 78320592 -25174382 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 1182 203 60 80 0 chr15 78320988 78321038 -25173936 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 1182 378 115 0 0 chr15 78321562 78321623 -25173351 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 1182 603 283 14 7 chr15 78321696 78321835 -25173139 - RSINE1 SINE B4 -23 142 3 5 1182 324 268 0 93 chr15 78321835 78321940 -25173034 - B4A SINE B4 -197 95 1 5 1182 370 378 47 0 chr15 78322661 78322809 -25172165 - Tigger7 DNA MER2_type -2226 265 111 5 1182 348 77 0 0 chr15 78324549 78324601 -25170373 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1182 438 127 0 0 chr15 78325795 78325866 -25169108 + (CA)n Simple_repeat Simple_repeat 1 71 0 5 1182 231 333 64 9 chr15 78326326 78326435 -25168539 + Lx8 LINE L1 7028 7142 -331 5 1182 450 311 50 54 chr15 78326556 78326777 -25168197 + RMER15 LTR ERVL 319 538 -37 5 1182 210 321 12 12 chr15 78326875 78326957 -25168017 + MIRc SINE MIR 71 152 -116 5 1182 411 325 74 29 chr15 78326958 78327211 -25167763 - ORR1E LTR MaLR 0 379 97 5 1182 234 316 101 0 chr15 78328314 78328453 -25166521 + MLT1J2 LTR MaLR 62 214 -234 5 1182 498 75 0 0 chr15 78328498 78328565 -25166409 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 5 1182 2462 150 49 17 chr15 78329598 78330004 -25164970 + MTC LTR MaLR 3 421 0 5 1182 385 350 6 24 chr15 78330132 78330296 -25164678 - MLT1J LTR MaLR -164 348 188 5 1182 309 363 157 12 chr15 78330372 78330620 -25164354 - B4A SINE B4 -8 284 1 5 1182 383 210 48 29 chr15 78330620 78330711 -25164263 - B4A SINE B4 -71 221 129 5 1182 1510 151 57 136 chr15 78331274 78331641 -25163333 - ORR1A0 LTR MaLR -8 338 1 5 1182 294 29 0 0 chr15 78332792 78332827 -25162147 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1182 402 312 56 39 chr15 78333349 78333529 -25161445 + LTR84b LTR ERVL 126 308 -453 5 1182 443 262 10 0 chr15 78334736 78334839 -25160135 - PB1D7 SINE Alu -11 109 6 5 1182 4934 109 74 0 chr15 78335016 78335702 -25159272 + RMER19A LTR ERVK 1 737 0 5 1182 889 241 214 29 chr15 78335902 78336244 -25158730 + MTD LTR MaLR 1 405 -14 5 1182 803 301 5 18 chr15 78336610 78336830 -25158144 - ID_B1 SINE B4 -6 218 2 5 1182 355 264 34 94 chr15 78336866 78336983 -25157991 - PB1D7 SINE Alu -9 111 2 5 1182 380 300 10 86 chr15 78337335 78337532 -25157442 + B3A SINE B2 1 182 -16 5 1182 688 161 0 13 chr15 78337535 78337663 -25157311 + GA-rich Low_complexity Low_complexity 2 127 0 5 1182 324 70 0 0 chr15 78337663 78337706 -25157268 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 1182 688 161 0 13 chr15 78337706 78337734 -25157240 + polypurine Low_complexity Low_complexity 128 155 0 5 1182 311 178 35 12 chr15 78337754 78337925 -25157049 + (TAGA)n Simple_repeat Simple_repeat 2 176 0 5 1182 207 302 0 0 chr15 78337926 78337989 -25156985 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 1182 256 312 0 0 chr15 78338030 78338094 -25156880 + MER5A DNA MER1_type 117 180 -9 5 1182 256 320 99 52 chr15 78339050 78339261 -25155713 - MIR SINE MIR -23 245 20 5 1182 198 0 0 0 chr15 78339261 78339283 -25155691 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1182 280 217 0 48 chr15 78339391 78339454 -25155520 - RSINE1 SINE B4 -103 62 3 5 1182 189 0 0 0 chr15 78339509 78339530 -25155444 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1182 1132 98 104 0 chr15 78339530 78339694 -25155280 - B2_Mm2 SINE B2 -14 181 1 5 1182 584 234 21 21 chr15 78339697 78339841 -25155133 - B1_Mm SINE Alu 0 147 4 5 1182 270 0 0 0 chr15 78339956 78339986 -25154988 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1182 211 178 22 0 chr15 78342396 78342441 -25152533 + B4 SINE B4 2 47 -245 5 1182 207 0 0 0 chr15 78342907 78342930 -25152044 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 5 1182 476 308 53 21 chr15 78343098 78343287 -25151687 - MIRb SINE MIR -73 195 1 5 1182 3156 190 54 98 chr15 78343426 78344273 -25150701 - RLTR40 LTR ERVK -3 814 5 5 1182 540 0 0 0 chr15 78344658 78344718 -25150256 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 1182 180 301 151 0 chr15 78345264 78345357 -25149617 - MIRc SINE MIR -130 138 32 5 1182 212 185 19 0 chr15 78345598 78345652 -25149322 + GA-rich Low_complexity Low_complexity 3 57 0 5 1182 447 252 0 0 chr15 78345677 78345804 -25149170 + (TGGA)n Simple_repeat Simple_repeat 4 130 0 5 1182 288 293 0 0 chr15 78346158 78346233 -25148741 - Lx9 LINE L1 -374 7270 7196 5 1182 216 196 18 0 chr15 78346302 78346358 -25148616 + (CACCC)n Simple_repeat Simple_repeat 5 61 0 5 1182 932 301 47 42 chr15 78346771 78347174 -25147800 - RMER5 LTR ERV1 -7 527 123 5 1182 561 286 80 25 chr15 78347226 78347427 -25147547 - MTE2a LTR MaLR -5 374 163 5 1182 229 231 0 55 chr15 78347562 78347617 -25147357 + B4 SINE B4 35 86 -206 5 1182 492 353 43 85 chr15 78348336 78348664 -25146310 - ORR1E LTR MaLR -45 314 1 5 1182 261 272 12 12 chr15 78349099 78349181 -25145793 - MIR SINE MIR -118 144 63 5 1182 851 142 1 6 chr15 78349208 78349415 -25145559 + (TG)n Simple_repeat Simple_repeat 1 205 0 5 1182 297 0 0 0 chr15 78349415 78349448 -25145526 + (GA)n Simple_repeat Simple_repeat 1 33 0 5 1182 655 165 6 6 chr15 78349448 78349591 -25145383 + (TG)n Simple_repeat Simple_repeat 1 143 0 5 1182 459 0 0 0 chr15 78350113 78350164 -25144810 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 1182 438 20 0 0 chr15 78350294 78350345 -25144629 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1182 201 39 0 0 chr15 78350352 78350378 -25144596 + (CATG)n Simple_repeat Simple_repeat 2 27 0 5 1182 389 192 8 0 chr15 78351178 78351298 -25143676 + (CA)n Simple_repeat Simple_repeat 1 121 0 5 1182 538 234 79 21 chr15 78352128 78352268 -25142706 - B1_Mur1 SINE Alu -1 148 1 5 1182 1036 225 154 25 chr15 78353108 78353427 -25141547 + MTEa LTR MaLR 18 377 -2 5 1182 249 289 31 0 chr15 78353572 78353656 -25141318 - MIRc SINE MIR -92 184 96 5 1182 277 313 24 0 chr15 78354911 78354994 -25139980 + MER5A DNA MER1_type 7 91 -98 5 1182 229 244 0 0 chr15 78355234 78355279 -25139695 + G-rich Low_complexity Low_complexity 1 45 0 5 1182 308 133 0 16 chr15 78357560 78357621 -25137353 + (TCCC)n Simple_repeat Simple_repeat 1 60 0 5 1182 242 29 29 0 chr15 78360070 78360105 -25134869 + (GGGA)n Simple_repeat Simple_repeat 2 37 0 5 1182 197 203 119 0 chr15 78360666 78360725 -25134249 + MIRc SINE MIR 85 150 -118 5 1182 331 288 75 5 chr15 78361135 78361266 -25133708 - MIR3 SINE MIR -27 181 47 5 1182 189 282 80 34 chr15 78361775 78361863 -25133111 + MIRb SINE MIR 36 127 -141 5 1182 731 138 0 0 chr15 78361894 78362010 -25132964 - B1_Mur4 SINE Alu -17 133 18 5 1182 345 295 0 58 chr15 78362010 78362031 -25132943 - ID_B1 SINE B4 -17 207 79 6 1182 201 313 83 38 chr15 78362887 78363020 -25131954 - MIRb SINE MIR -119 149 11 6 1182 208 394 0 0 chr15 78363857 78363961 -25131013 - MIR SINE MIR -129 133 30 6 1182 571 196 302 64 chr15 78364303 78364538 -25130436 + B4A SINE B4 2 292 0 6 1182 421 188 17 22 chr15 78364540 78364720 -25130254 + (CA)n Simple_repeat Simple_repeat 1 179 0 6 1182 276 340 78 24 chr15 78364735 78364901 -25130073 - MLT1C LTR MaLR -62 405 231 6 1182 244 254 51 0 chr15 78364923 78364982 -25129992 - B1F SINE Alu -7 142 81 6 1182 466 308 146 21 chr15 78364971 78365210 -25129764 - MLT1C LTR MaLR -198 269 1 6 1182 21 57 0 0 chr15 78365658 78365693 -25129281 + AT_rich Low_complexity Low_complexity 1 35 0 6 1182 513 0 0 0 chr15 78365693 78365750 -25129224 + (TC)n Simple_repeat Simple_repeat 2 58 0 6 1182 456 19 0 0 chr15 78365750 78365802 -25129172 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1182 215 220 60 0 chr15 78365805 78365855 -25129119 - RSINE1 SINE B4 -24 141 89 6 1182 389 220 160 30 chr15 78365860 78365991 -25128983 - B3A SINE B2 -50 148 1 6 1182 333 0 0 0 chr15 78366721 78366758 -25128216 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 1182 204 125 0 0 chr15 78366947 78366979 -25127995 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1182 257 247 13 27 chr15 78368687 78368762 -25126212 + CT-rich Low_complexity Low_complexity 6 79 0 6 1182 320 269 58 0 chr15 78368894 78368998 -25125976 - Arthur1A DNA Tip100 -60 117 8 6 1182 227 276 22 27 chr15 78369378 78369515 -25125459 - MIR SINE MIR -94 182 45 6 1182 273 323 11 0 chr15 78369820 78369913 -25125061 + CT-rich Low_complexity Low_complexity 2 95 0 6 1182 519 101 0 0 chr15 78373184 78373263 -25121711 + (CA)n Simple_repeat Simple_repeat 2 80 0 6 1182 293 239 0 15 chr15 78373811 78373879 -25121095 - MIRc SINE MIR -135 133 67 6 1182 365 225 51 65 chr15 78374115 78374253 -25120721 + MIRb SINE MIR 51 186 -82 6 1182 304 265 17 62 chr15 78374927 78375146 -25119828 + GA-rich Low_complexity Low_complexity 1 209 0 6 1182 369 109 0 0 chr15 78376136 78376191 -25118783 + (TTCA)n Simple_repeat Simple_repeat 2 56 0 6 1182 1331 124 4 0 chr15 78376885 78377349 -25117625 + (TGGA)n Simple_repeat Simple_repeat 1 465 0 6 1182 225 346 0 13 chr15 78378040 78378119 -25116855 + MIRc SINE MIR 49 126 -142 6 1182 379 286 132 45 chr15 78378480 78378722 -25116252 + MER34 LTR ERV1 4 266 -276 6 1182 250 250 42 0 chr15 78378835 78378907 -25116067 + MER34 LTR ERV1 446 520 -22 6 1182 356 320 0 0 chr15 78379403 78379506 -25115468 - PB1D10 SINE Alu -4 113 11 6 1182 3939 195 86 40 chr15 78379554 78379667 -25115307 - RMER1A Other Other -15 1015 876 6 1182 207 0 0 0 chr15 78379667 78379690 -25115284 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 1182 3939 195 86 40 chr15 78379690 78380474 -25114500 - RMER1A Other Other -155 875 77 6 1182 680 204 123 46 chr15 78380481 78380586 -25114388 - B3 SINE B2 -6 210 85 6 1182 477 0 0 0 chr15 78380586 78380639 -25114335 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1182 680 204 123 46 chr15 78380639 78380728 -25114246 - B3 SINE B2 -132 84 1 6 1183 552 309 32 11 chr15 78381284 78381474 -25113500 + MTE-int LTR MaLR 1 194 -1386 6 1183 332 233 11 65 chr15 78381480 78381572 -25113402 + MTC LTR MaLR 330 416 -3 6 1183 3943 189 112 60 chr15 78381575 78382122 -25112852 + MTC-int LTR MaLR 1 733 -525 6 1183 2308 165 31 0 chr15 78382122 78382504 -25112470 + ORR1B1 LTR MaLR 1 394 0 6 1183 3943 170 105 27 chr15 78382504 78383039 -25111935 + MTC-int LTR MaLR 734 1258 0 6 1183 1628 158 205 6 chr15 78383039 78383390 -25111584 + MTC LTR MaLR 1 421 0 6 1183 1354 315 84 111 chr15 78383391 78383899 -25111075 + MTE-int LTR MaLR 193 737 -843 6 1183 207 69 0 0 chr15 78383899 78383928 -25111046 + (CAA)n Simple_repeat Simple_repeat 2 30 0 6 1183 1354 315 84 111 chr15 78383928 78384515 -25110459 + MTE-int LTR MaLR 738 1258 -322 6 1183 893 254 35 28 chr15 78385377 78385665 -25109309 - RLTR15 LTR ERVK -69 290 1 6 1183 400 317 43 14 chr15 78385789 78385930 -25109044 + ERVL-int LTR ERVL 5610 5754 -3 6 1183 480 291 66 12 chr15 78385930 78386032 -25108942 + Ricksha_c DNA MuDR 344 454 -1594 6 1183 231 337 74 18 chr15 78386892 78387003 -25107971 + L2c LINE L2 3235 3355 -32 6 1183 459 0 0 0 chr15 78387409 78387460 -25107514 + (TC)n Simple_repeat Simple_repeat 2 52 0 6 1183 562 172 0 10 chr15 78387497 78387597 -25107377 + B1_Mur3 SINE Alu 35 133 -16 6 1183 186 43 0 0 chr15 78387603 78387626 -25107348 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 6 1183 247 200 15 77 chr15 78388809 78388874 -25106100 - B3 SINE B2 -56 160 100 6 1183 210 234 9 26 chr15 78389017 78389131 -25105843 + G-rich Low_complexity Low_complexity 2 113 0 6 1183 189 74 0 0 chr15 78389743 78389770 -25105204 + (AGGGGG)n Simple_repeat Simple_repeat 1 27 0 6 1183 483 295 18 0 chr15 78390462 78390574 -25104400 + PB1D10 SINE Alu 3 116 -1 6 1183 1162 56 0 20 chr15 78390576 78390712 -25104262 + B1_Mus1 SINE Alu 1 136 -12 6 1183 337 20 40 0 chr15 78390712 78390762 -25104212 + (CAAAA)n Simple_repeat Simple_repeat 3 54 0 6 1183 277 326 87 44 chr15 78391173 78391356 -25103618 + MLT1K LTR MaLR 399 589 -6 6 1183 743 123 26 35 chr15 78393680 78394117 -25100857 + (CA)n Simple_repeat Simple_repeat 1 432 0 6 1183 341 260 62 0 chr15 78394246 78394342 -25100632 + MTEa LTR MaLR 201 302 -77 6 1183 385 225 0 24 chr15 78394352 78394434 -25100540 + ID4_ SINE ID 1 80 -3 6 1183 299 276 59 66 chr15 78395105 78395241 -25099733 - MIR SINE MIR -106 156 22 6 1183 278 81 53 26 chr15 78396680 78396756 -25098218 + T-rich Low_complexity Low_complexity 2 79 0 6 1183 278 269 15 0 chr15 78397375 78397442 -25097532 - MIRc SINE MIR -137 131 64 6 1183 26 30 0 0 chr15 78398789 78398822 -25096152 + AT_rich Low_complexity Low_complexity 1 33 0 6 1183 701 216 47 0 chr15 78398838 78398866 -25096108 + ID SINE ID 51 81 -143 6 1183 478 270 80 0 chr15 78398866 78399003 -25095971 + B1_Mur3 SINE Alu 1 148 -1 6 1183 276 198 57 26 chr15 78399017 78399114 -25095860 + B1F1 SINE Alu 22 127 0 6 1183 207 287 54 20 chr15 78400470 78400591 -25094383 - L2a LINE L2 -271 3155 3028 6 1183 293 337 21 0 chr15 78401556 78401651 -25093323 + MIRb SINE MIR 60 156 -112 6 1183 273 261 226 11 chr15 78401752 78401845 -25093129 + MIRb SINE MIR 37 149 -119 6 1183 277 266 128 0 chr15 78403456 78403565 -25091409 - L2b LINE L2 -14 3361 3239 6 1183 362 327 10 0 chr15 78403727 78403828 -25091146 + G-rich Low_complexity Low_complexity 4 105 0 6 1183 934 140 6 6 chr15 78403832 78404012 -25090962 + GA-rich Low_complexity Low_complexity 1 180 0 6 1183 334 290 45 30 chr15 78404082 78404206 -25090768 + B1F1 SINE Alu 24 140 -7 6 1183 517 358 99 41 chr15 78404342 78404786 -25090188 - L1M5 LINE L1 -774 5399 4931 6 1183 1331 218 133 26 chr15 78404786 78405125 -25089849 - MTE2a LTR MaLR -2 377 3 6 1183 517 378 133 44 chr15 78405125 78405708 -25089266 - L1M5 LINE L1 -1216 4930 4286 6 1183 544 204 158 14 chr15 78405745 78405884 -25089090 - RSINE1 SINE B4 -4 161 3 6 1183 206 116 23 0 chr15 78405949 78405992 -25088982 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 6 1183 250 324 0 0 chr15 78406815 78406886 -25088088 - L1M5 LINE L1 -3650 2496 2426 6 1183 379 274 39 89 chr15 78406990 78407170 -25087804 + B4A SINE B4 2 172 -120 6 1183 222 241 34 17 chr15 78407194 78407253 -25087721 + RSINE1 SINE B4 93 152 -13 6 1183 552 15 0 0 chr15 78407261 78407326 -25087648 + (CA)n Simple_repeat Simple_repeat 2 66 0 6 1183 559 288 6 58 chr15 78407336 78407509 -25087465 + RSINE1 SINE B4 2 165 0 6 1183 695 220 187 0 chr15 78407522 78407704 -25087270 - B3 SINE B2 0 216 1 6 1183 513 47 0 0 chr15 78408222 78408286 -25086688 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 1183 360 233 43 25 chr15 78408286 78408390 -25086584 + (TGGA)n Simple_repeat Simple_repeat 1 106 0 6 1183 228 67 0 0 chr15 78408390 78408420 -25086554 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 6 1183 225 320 26 7 chr15 78408420 78408536 -25086438 + (TGAA)n Simple_repeat Simple_repeat 3 119 0 6 1183 358 239 0 13 chr15 78408538 78408695 -25086279 + (TGGA)n Simple_repeat Simple_repeat 4 158 0 6 1183 402 192 23 29 chr15 78408733 78408905 -25086069 + (TGGA)n Simple_repeat Simple_repeat 2 172 0 6 1183 300 232 21 104 chr15 78409235 78409331 -25085643 + B3A SINE B2 111 198 0 6 1183 2355 146 171 2 chr15 78409367 78409648 -25085326 + RMER4B LTR ERVK 17 319 -266 6 1183 1122 8 0 0 chr15 78409648 78409775 -25085199 + (GGA)n Simple_repeat Simple_repeat 3 129 0 6 1183 2355 146 171 2 chr15 78409775 78409974 -25085000 + RMER4B LTR ERVK 320 577 -8 6 1183 213 146 0 0 chr15 78410286 78410334 -25084640 + (C)n Simple_repeat Simple_repeat 1 48 0 6 1183 331 305 63 0 chr15 78411137 78411232 -25083742 - PB1D10 SINE Alu -13 104 4 6 1183 459 224 0 0 chr15 78411236 78411343 -25083631 + (TATG)n Simple_repeat Simple_repeat 2 108 0 6 1183 452 303 89 6 chr15 78411387 78411543 -25083431 + B3A SINE B2 1 170 -28 6 1183 474 18 0 0 chr15 78411543 78411598 -25083376 + (CA)n Simple_repeat Simple_repeat 1 55 0 6 1183 452 303 89 6 chr15 78411598 78411620 -25083354 + B3A SINE B2 171 194 -4 6 1183 310 282 0 37 chr15 78412774 78412855 -25082119 + RSINE1 SINE B4 31 108 -57 6 1183 225 89 45 75 chr15 78412908 78413042 -25081932 + (TTATA)n Simple_repeat Simple_repeat 5 134 0 6 1183 251 282 150 24 chr15 78413333 78413500 -25081474 + MLT1A0 LTR MaLR 169 356 -9 6 1183 270 0 0 0 chr15 78413531 78413561 -25081413 + (ATTG)n Simple_repeat Simple_repeat 1 30 0 6 1183 402 304 45 40 chr15 78413598 78413800 -25081174 - L1MA9 LINE L1 -6 6306 6104 6 1183 633 312 83 32 chr15 78413948 78414661 -25080313 - L1MA9 LINE L1 -612 5679 4926 6 1183 344 193 23 0 chr15 78414689 78414777 -25080197 + (CATATA)n Simple_repeat Simple_repeat 3 92 0 6 1183 748 158 24 124 chr15 78414777 78414942 -25080032 - B3 SINE B2 -13 182 44 6 1183 1718 26 0 0 chr15 78414942 78415135 -25079839 - B2_Mm1a SINE B2 0 193 1 6 1183 748 122 20 109 chr15 78415135 78415176 -25079798 - B3 SINE B2 -173 43 1 6 1183 849 240 79 24 chr15 78415186 78415438 -25079536 - L1MA9 LINE L1 -1199 4944 4679 6 1183 386 220 44 0 chr15 78415440 78415531 -25079443 + B1F1 SINE Alu 2 96 -53 6 1183 939 195 143 5 chr15 78415709 78415905 -25079069 - ID_B1 SINE B4 0 224 2 6 1183 312 306 38 64 chr15 78416164 78416321 -25078653 + MLT1B LTR MaLR 61 213 -177 6 1183 451 295 41 0 chr15 78416319 78416441 -25078533 + ID_B1 SINE B4 80 206 -18 6 1183 694 250 56 25 chr15 78416541 78416701 -25078273 + RSINE1 SINE B4 1 165 0 7 1183 204 279 0 16 chr15 78417148 78417210 -25077764 + MIRc SINE MIR 75 135 -133 7 1183 208 158 0 26 chr15 78418361 78418400 -25076574 + CT-rich Low_complexity Low_complexity 3 40 0 7 1183 958 254 14 14 chr15 78418403 78418626 -25076348 - ID_B1 SINE B4 0 224 2 7 1183 2525 83 3 9 chr15 78418785 78419114 -25075860 + ORR1A2 LTR MaLR 1 327 0 7 1183 1160 139 115 34 chr15 78419200 78419409 -25075565 + URR1A DNA MER1_type 1 226 0 7 1183 192 140 0 85 chr15 78419577 78419624 -25075350 + MIR3 SINE MIR 119 161 -47 7 1183 1104 260 116 48 chr15 78419684 78420039 -25074935 - MTE2b LTR MaLR 0 379 1 7 1183 734 244 0 60 chr15 78420505 78420671 -25074303 + RSINE1 SINE B4 3 158 -7 7 1183 509 291 50 78 chr15 78420864 78421106 -25073868 - L1MB3 LINE L1 -235 5948 5714 7 1183 591 240 82 82 chr15 78421330 78421525 -25073449 - B3A SINE B2 0 198 4 7 1183 482 267 62 6 chr15 78422342 78422504 -25072470 - L4 LINE RTE -184 1845 1675 7 1183 550 316 57 9 chr15 78423276 78423487 -25071487 + RMER15 LTR ERVL 348 568 -7 7 1183 830 96 7 0 chr15 78423962 78424097 -25070877 + (TC)n Simple_repeat Simple_repeat 1 136 0 7 1183 845 203 90 5 chr15 78424104 78424292 -25070682 + ORR1D1 LTR MaLR 167 370 -4 7 1183 235 358 0 0 chr15 78424298 78424365 -25070609 - B4 SINE B4 -224 68 2 7 1183 711 231 16 35 chr15 78425045 78425236 -25069738 - ID_B1 SINE B4 0 224 44 7 1183 1599 205 53 51 chr15 78425339 78425714 -25069260 - MTE2b LTR MaLR 0 379 4 7 1183 282 200 0 0 chr15 78426249 78426304 -25068670 - ID4 SINE ID -27 56 2 7 1183 343 265 87 10 chr15 78426312 78426415 -25068559 - PB1D10 SINE Alu -1 116 6 7 1183 195 100 0 0 chr15 78426469 78426499 -25068475 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 7 1183 213 39 0 0 chr15 78427310 78427336 -25067638 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 7 1183 492 18 0 0 chr15 78428602 78428659 -25066315 + (TC)n Simple_repeat Simple_repeat 2 58 0 7 1183 1054 121 0 20 chr15 78428678 78428830 -25066144 - B1_Mur3 SINE Alu 0 149 1 7 1183 241 389 9 0 chr15 78430023 78430131 -25064843 + MIRb SINE MIR 65 173 -95 7 1183 627 168 136 0 chr15 78430489 78430614 -25064360 + B1_Mur4 SINE Alu 8 149 -1 7 1183 400 255 209 26 chr15 78430491 78430644 -25064330 + B4A SINE B4 94 274 -18 7 1183 238 331 14 97 chr15 78430661 78430805 -25064169 - RMER12 LTR ERVK -456 866 735 7 1183 210 324 25 37 chr15 78430807 78430933 -25064041 + MIRc SINE MIR 58 177 -31 7 1183 245 342 0 0 chr15 78431347 78431420 -25063554 + ID4_ SINE ID 9 81 -2 7 1183 521 244 25 34 chr15 78431971 78432090 -25062884 - PB1D7 SINE Alu -2 118 1 7 1183 286 200 33 33 chr15 78432761 78432864 -25062110 + MLT1J LTR MaLR 33 148 -364 7 1183 486 0 0 0 chr15 78433065 78433119 -25061855 + (TC)n Simple_repeat Simple_repeat 1 54 0 7 1183 222 309 9 0 chr15 78433212 78433322 -25061652 + (CA)n Simple_repeat Simple_repeat 1 111 0 7 1183 233 283 0 48 chr15 78435470 78435533 -25059441 + MIR3 SINE MIR 107 166 -42 7 1183 366 226 160 30 chr15 78435539 78435708 -25059266 + RMER30 DNA MER1_type 11 201 -1 7 1183 351 0 0 0 chr15 78435827 78435866 -25059108 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1183 212 196 0 56 chr15 78437225 78437279 -25057695 - L3 LINE CR1 -114 4375 4325 7 1183 195 318 104 22 chr15 78437635 78437650 -25057324 - L2b LINE L2 0 3426 3411 7 1183 348 125 0 0 chr15 78437650 78437714 -25057260 + (CATG)n Simple_repeat Simple_repeat 1 64 0 7 1183 195 318 104 22 chr15 78437714 78437833 -25057141 - L2b LINE L2 -16 3410 3282 7 1183 387 98 0 0 chr15 78438341 78438402 -25056572 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 1183 262 173 0 80 chr15 78438660 78438773 -25056201 + G-rich Low_complexity Low_complexity 5 108 0 7 1183 438 259 128 15 chr15 78439190 78439323 -25055651 + B1F SINE Alu 1 148 -1 7 1183 225 277 34 0 chr15 78439362 78439450 -25055524 + MIRm SINE MIR 116 209 -59 7 1183 241 268 48 24 chr15 78439528 78439612 -25055362 - L2b LINE L2 -207 3168 3083 7 1183 703 59 42 0 chr15 78439676 78439794 -25055180 + (TCTA)n Simple_repeat Simple_repeat 3 125 0 7 1183 285 169 0 0 chr15 78439798 78439857 -25055117 + CT-rich Low_complexity Low_complexity 1 59 0 7 1183 234 325 38 45 chr15 78440379 78440511 -25054463 - L2c LINE L2 -189 3198 3068 7 1183 482 192 9 80 chr15 78441144 78441257 -25053717 + PB1D10 SINE Alu 3 107 -10 7 1183 206 289 25 50 chr15 78441316 78441396 -25053578 + MIRm SINE MIR 85 162 -114 7 1183 508 258 16 8 chr15 78442786 78442915 -25052059 + ID_B1 SINE B4 94 223 -1 7 1183 228 135 0 0 chr15 78442927 78442964 -25052010 + (CGAAA)n Simple_repeat Simple_repeat 4 40 0 7 1183 486 256 111 0 chr15 78444202 78444319 -25050655 - RSINE1 SINE B4 -34 131 2 7 1183 922 115 0 0 chr15 78444415 78444545 -25050429 + B3 SINE B2 1 130 -86 7 1183 276 100 0 0 chr15 78444561 78444601 -25050373 + (ATTG)n Simple_repeat Simple_repeat 2 41 0 7 1183 329 390 32 37 chr15 78444782 78444971 -25050003 - MLT1K LTR MaLR -323 272 85 7 1183 387 0 0 0 chr15 78446308 78446351 -25048623 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1183 792 172 33 8 chr15 78446414 78446655 -25048319 + (TCCA)n Simple_repeat Simple_repeat 1 247 0 7 1183 653 254 7 14 chr15 78446673 78447236 -25047738 + (TCCA)n Simple_repeat Simple_repeat 1 559 0 7 1183 214 340 65 19 chr15 78448102 78448210 -25046764 + MIRm SINE MIR 116 228 -48 7 1183 1124 238 168 12 chr15 78448222 78448550 -25046424 - MTEa LTR MaLR 0 379 1 7 1183 456 267 10 10 chr15 78449189 78449291 -25045683 + PB1D7 SINE Alu 2 103 -17 7 1183 183 42 0 0 chr15 78449295 78449319 -25045655 + (CAA)n Simple_repeat Simple_repeat 1 24 0 7 1183 1266 182 9 45 chr15 78449336 78449560 -25045414 + B3 SINE B2 1 216 0 7 1183 327 113 0 0 chr15 78449969 78450031 -25044943 + (TC)n Simple_repeat Simple_repeat 1 62 0 7 1183 201 341 15 68 chr15 78452674 78452806 -25042168 + L3 LINE CR1 4287 4411 -78 7 1183 243 285 75 0 chr15 78452824 78452921 -25042053 - L2a LINE L2 -12 3414 3251 7 1183 716 245 56 30 chr15 78453116 78453314 -25041660 + B3 SINE B2 1 203 -13 7 1183 296 210 0 12 chr15 78453339 78453421 -25041553 + (CA)n Simple_repeat Simple_repeat 2 82 0 7 1183 653 167 19 0 chr15 78453456 78453564 -25041410 + PB1D9 SINE Alu 2 111 -9 7 1183 228 86 0 0 chr15 78453800 78453835 -25041139 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 7 1183 248 163 82 0 chr15 78454496 78454545 -25040429 + MIR SINE MIR 97 149 -113 7 1183 495 279 62 49 chr15 78454574 78454736 -25040238 + RSINE1 SINE B4 2 165 0 7 1183 233 299 83 9 chr15 78455365 78455473 -25039501 + MIR3 SINE MIR 5 120 -88 7 1183 275 326 11 11 chr15 78456234 78456327 -25038647 + MIRb SINE MIR 49 141 -127 7 1183 352 270 58 22 chr15 78456533 78456651 -25038323 - PB1D7 SINE Alu 0 149 27 7 1183 373 288 18 0 chr15 78456653 78456764 -25038210 - PB1D7 SINE Alu -6 114 2 7 1183 228 67 0 0 chr15 78457114 78457144 -25037830 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 7 1183 1896 203 105 67 chr15 78457759 78457977 -25036997 + RMER15 LTR ERVL 1 252 -323 7 1183 1074 116 184 36 chr15 78457977 78458173 -25036801 - URR1B DNA MER1_type 0 225 1 7 1183 1896 203 105 67 chr15 78458173 78458508 -25036466 + RMER15 LTR ERVL 253 575 0 7 1183 329 321 80 0 chr15 78458604 78458741 -25036233 - MLT1I LTR MaLR -230 181 34 7 1183 239 368 83 7 chr15 78459125 78459270 -25035704 - MER5A DNA MER1_type -32 157 2 7 1183 458 146 116 13 chr15 78460078 78460173 -25034801 + B1_Mur1 SINE Alu 27 130 -20 7 1183 560 199 59 30 chr15 78460194 78460329 -25034645 + ID_B1 SINE B4 82 220 -4 7 1183 553 156 140 263 chr15 78460381 78460418 -25034556 + B3 SINE B2 4 40 -176 7 1183 1266 40 0 0 chr15 78460418 78460566 -25034408 + B1_Mus1 SINE Alu 1 148 0 7 1183 553 156 140 263 chr15 78460566 78460771 -25034203 + B3 SINE B2 41 216 0 7 1183 466 239 0 26 chr15 78461531 78461647 -25033327 - B1F SINE Alu -1 148 36 7 1183 252 265 56 47 chr15 78461890 78461997 -25032977 + MER58B DNA MER1_type 90 197 -144 7 1183 306 0 0 0 chr15 78462275 78462309 -25032665 + (CCCCCA)n Simple_repeat Simple_repeat 2 35 0 7 1183 731 222 56 0 chr15 78462633 78462795 -25032179 - ID_B1 SINE B4 0 224 54 7 1183 510 239 18 0 chr15 78463152 78463265 -25031709 + PB1D7 SINE Alu 1 115 -5 7 1183 811 144 15 19 chr15 78463269 78463545 -25031429 + GA-rich Low_complexity Low_complexity 1 274 0 7 1183 1320 165 14 0 chr15 78465311 78465529 -25029445 + URR1B DNA MER1_type 3 223 -2 7 1183 624 38 0 0 chr15 78466320 78466399 -25028575 + (GGAA)n Simple_repeat Simple_repeat 4 82 0 7 1183 203 301 77 34 chr15 78466669 78466786 -25028188 - MIRb SINE MIR -112 156 35 7 1183 405 0 0 0 chr15 78467208 78467253 -25027721 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 1183 368 217 0 67 chr15 78467357 78467446 -25027528 + B1F SINE Alu 30 112 -37 7 1183 275 203 43 0 chr15 78467818 78467887 -25027087 + PB1 SINE Alu 9 80 -47 7 1183 201 94 0 0 chr15 78468163 78468195 -25026779 + (AGGGGG)n Simple_repeat Simple_repeat 3 34 0 7 1183 197 226 93 19 chr15 78468695 78468749 -25026225 + MIRc SINE MIR 71 128 -140 7 1183 187 29 56 28 chr15 78469804 78469840 -25025134 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 7 1183 393 205 13 0 chr15 78469847 78469925 -25025049 + B2_Mm2 SINE B2 1 79 -116 7 1183 459 73 0 0 chr15 78469940 78470008 -25024966 + (TC)n Simple_repeat Simple_repeat 2 69 0 8 1183 567 66 0 0 chr15 78471412 78471488 -25023486 + (CA)n Simple_repeat Simple_repeat 2 77 0 8 1183 450 143 0 0 chr15 78472168 78472245 -25022729 + (CA)n Simple_repeat Simple_repeat 1 77 0 8 1183 249 257 14 0 chr15 78473107 78473181 -25021793 + GA-rich Low_complexity Low_complexity 1 75 0 8 1183 211 272 80 41 chr15 78474652 78474792 -25020182 - MIRc SINE MIR -108 168 22 8 1183 193 189 187 13 chr15 78474923 78474998 -25019976 + MIR SINE MIR 43 130 -132 8 1183 389 328 17 11 chr15 78476174 78476350 -25018624 + (CA)n Simple_repeat Simple_repeat 1 177 0 8 1183 362 350 0 18 chr15 78476378 78476541 -25018433 + (CA)n Simple_repeat Simple_repeat 1 160 0 8 1183 232 259 0 0 chr15 78476989 78477043 -25017931 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 1183 189 280 0 0 chr15 78477229 78477279 -25017695 - L3 LINE CR1 -106 4383 4334 8 1183 214 313 11 57 chr15 78478772 78478860 -25016114 - B1F2 SINE Alu -51 98 15 8 1183 436 194 40 79 chr15 78478983 78479084 -25015890 - PB1D7 SINE Alu -15 105 9 8 1183 320 211 0 151 chr15 78479127 78479233 -25015741 + PB1D10 SINE Alu 11 100 -17 8 1183 618 220 63 35 chr15 78479977 78480180 -25014794 + B4A SINE B4 3 226 -66 8 1183 516 258 67 22 chr15 78480180 78480315 -25014659 + B3A SINE B2 2 142 -56 8 1183 531 0 0 0 chr15 78480328 78480387 -25014587 + (CA)n Simple_repeat Simple_repeat 2 60 0 8 1183 294 129 0 0 chr15 78480387 78480449 -25014525 + (GA)n Simple_repeat Simple_repeat 1 62 0 8 1183 485 241 58 14 chr15 78480471 78480610 -25014364 + RSINE1 SINE B4 19 163 -2 8 1183 972 220 55 0 chr15 78480710 78480910 -25014064 - B3 SINE B2 -3 213 3 8 1183 1384 88 11 6 chr15 78480910 78481093 -25013881 - B2_Mm2 SINE B2 -11 184 1 8 1183 396 0 0 0 chr15 78481215 78481259 -25013715 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 1183 411 349 0 19 chr15 78481591 78481746 -25013228 + C-rich Low_complexity Low_complexity 2 153 0 8 1183 863 130 0 7 chr15 78481922 78482069 -25012905 + (TCC)n Simple_repeat Simple_repeat 1 146 0 8 1183 188 67 0 32 chr15 78482248 78482279 -25012695 + (TCCC)n Simple_repeat Simple_repeat 4 33 0 8 1183 1763 220 9 47 chr15 78482355 78482780 -25012194 - MTD LTR MaLR -4 415 7 8 1183 407 254 13 4 chr15 78483540 78483647 -25011327 - B1F SINE Alu -9 111 5 8 1183 200 290 16 0 chr15 78483674 78483736 -25011238 + (TG)n Simple_repeat Simple_repeat 2 64 0 8 1183 521 292 40 40 chr15 78484168 78484318 -25010656 + RSINE1 SINE B4 16 165 0 8 1183 792 258 154 15 chr15 78485460 78485720 -25009254 + MTEa LTR MaLR 77 372 -7 8 1183 203 152 65 0 chr15 78485781 78485827 -25009147 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 8 1183 656 158 17 9 chr15 78485845 78485960 -25009014 + B1_Mus1 SINE Alu 21 136 -12 8 1183 396 189 14 0 chr15 78485977 78486051 -25008923 + B3A SINE B2 27 101 -97 8 1183 1128 228 91 53 chr15 78486106 78486448 -25008526 + ORR1D2 LTR MaLR 15 369 -1 8 1183 1083 262 78 31 chr15 78486439 78486795 -25008179 + ORR1D2-int LTR MaLR 4 344 -1619 8 1183 511 272 122 0 chr15 78486837 78486984 -25007990 - B3A SINE B2 -33 165 1 8 1183 305 332 206 44 chr15 78487575 78487827 -25007147 + ORR1D2-int LTR MaLR 322 614 -966 8 1183 2380 261 107 74 chr15 78487802 78488404 -25006570 + ORR1D2-int LTR MaLR 717 1324 -256 8 1183 345 24 0 0 chr15 78488404 78488446 -25006528 + (TG)n Simple_repeat Simple_repeat 1 42 0 8 1183 2380 261 107 74 chr15 78488446 78488676 -25006298 + ORR1D2-int LTR MaLR 1325 1576 -4 8 1183 728 240 228 76 chr15 78488680 78489009 -25005965 + ORR1D2 LTR MaLR 1 379 0 8 1183 477 110 0 0 chr15 78489015 78489088 -25005886 + (TC)n Simple_repeat Simple_repeat 1 73 0 8 1183 262 260 0 88 chr15 78489089 78489169 -25005805 - PB1D7 SINE Alu 0 149 59 8 1183 288 343 172 42 chr15 78489200 78489532 -25005442 - MLT1J LTR MaLR -93 419 45 8 1183 196 349 24 12 chr15 78491514 78491598 -25003376 - MIRb SINE MIR -76 192 108 8 1183 3074 91 43 9 chr15 78491992 78492414 -25002560 + RLTR10C LTR ERVK 1 436 0 8 1183 235 264 63 42 chr15 78493139 78493234 -25001740 - MER115 DNA Tip100 -52 641 545 8 1183 550 245 20 98 chr15 78494191 78494395 -25000579 - Lx6 LINE L1 -721 6739 6552 8 1183 1222 251 79 14 chr15 78494388 78494719 -25000255 + Lx6 LINE L1 7008 7357 -103 8 1183 207 0 0 0 chr15 78494719 78494742 -25000232 + (TG)n Simple_repeat Simple_repeat 2 24 0 8 1183 1222 251 79 14 chr15 78494742 78494777 -25000197 + Lx6 LINE L1 7358 7397 -63 8 1183 396 0 0 0 chr15 78495777 78495821 -24999153 + (GA)n Simple_repeat Simple_repeat 1 44 0 8 1183 348 56 19 0 chr15 78496212 78496266 -24998708 + B3 SINE B2 150 204 -12 8 1183 904 188 199 0 chr15 78496697 78496883 -24998091 - ID_B1 SINE B4 0 224 2 8 1183 393 22 0 0 chr15 78496949 78496995 -24997979 + (TG)n Simple_repeat Simple_repeat 2 47 0 8 1183 208 143 0 0 chr15 78500416 78500451 -24994523 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1183 261 119 0 0 chr15 78502126 78502168 -24992806 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1183 204 206 0 0 chr15 78505035 78505069 -24989905 + polypyrimidine Low_complexity Low_complexity 3 36 0 3 1183 342 0 0 0 chr15 78505555 78505593 -24989381 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1183 204 40 0 0 chr15 78507046 78507071 -24987903 + (CGAG)n Simple_repeat Simple_repeat 2 26 0 5 1183 187 398 0 22 chr15 78508957 78509047 -24985927 + MIRm SINE MIR 83 170 -106 6 1183 199 280 188 10 chr15 78509597 78509698 -24985276 + MIRb SINE MIR 18 136 -132 7 1183 249 288 30 0 chr15 78510419 78510485 -24984489 - MIR SINE MIR -63 145 78 8 1183 212 307 7 48 chr15 78511760 78511907 -24983067 + C-rich Low_complexity Low_complexity 1 141 0 9 1183 354 136 17 0 chr15 78512010 78512069 -24982905 - L2a LINE L2 0 3426 3367 1 1184 197 236 137 14 chr15 78513656 78513729 -24981245 + MIR SINE MIR 67 148 -60 1 1184 195 171 0 0 chr15 78513766 78513801 -24981173 + MIR SINE MIR 214 248 -14 1 1184 270 292 107 8 chr15 78515146 78515270 -24979704 - MIRc SINE MIR -55 153 20 1 1184 360 267 57 9 chr15 78516260 78516366 -24978608 + MIRm SINE MIR 164 274 -2 1 1184 185 323 30 15 chr15 78516727 78516793 -24978181 - MIRc SINE MIR -114 154 88 1 1184 243 267 78 10 chr15 78518977 78519086 -24975888 + MIRc SINE MIR 50 162 -106 1 1184 373 274 108 45 chr15 78520499 78520675 -24974299 - MIRb SINE MIR -61 207 21 1 1184 1125 186 46 37 chr15 78521508 78521726 -24973248 - URR1A DNA MER1_type -2 224 5 1 1184 205 150 75 0 chr15 78522146 78522186 -24972788 + L2b LINE L2 3118 3160 -215 1 1184 280 298 30 50 chr15 78522741 78522840 -24972134 + MIRb SINE MIR 43 139 -129 1 1184 240 163 0 0 chr15 78523458 78523501 -24971473 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1184 213 308 20 40 chr15 78523540 78523689 -24971285 + (CATATA)n Simple_repeat Simple_repeat 6 151 0 2 1184 213 39 0 0 chr15 78523695 78523721 -24971253 + (TATG)n Simple_repeat Simple_repeat 2 27 0 2 1184 220 350 113 0 chr15 78525427 78525572 -24969402 - MIRc SINE MIR -79 183 22 2 1184 669 114 0 0 chr15 78526066 78526171 -24968803 + (CA)n Simple_repeat Simple_repeat 2 106 0 2 1184 532 293 14 48 chr15 78526191 78526399 -24968575 + MIRb SINE MIR 68 268 0 2 1184 329 343 28 0 chr15 78526697 78526805 -24968169 + PB1D10 SINE Alu 1 111 -6 2 1184 250 255 11 108 chr15 78526805 78526905 -24968069 + B1F SINE Alu 22 119 -1 2 1184 546 16 0 0 chr15 78526924 78526987 -24967987 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1184 373 294 98 0 chr15 78527026 78527128 -24967846 + B1F1 SINE Alu 1 112 -37 2 1184 678 58 0 0 chr15 78527133 78527220 -24967754 + (TC)n Simple_repeat Simple_repeat 1 87 0 3 1184 304 222 55 14 chr15 78527271 78527344 -24967630 + HAL1-3A_ME LINE L1 1975 2050 -808 3 1184 185 267 22 0 chr15 78529086 78529131 -24965843 + MIRc SINE MIR 119 164 -104 3 1184 180 286 0 0 chr15 78530128 78530170 -24964804 - MIRm SINE MIR -4 272 231 3 1184 205 135 0 26 chr15 78530144 78530182 -24964792 - L2b LINE L2 -22 3353 3317 3 1184 360 284 26 8 chr15 78530349 78530466 -24964508 + PB1D9 SINE Alu 1 119 -1 3 1184 220 344 25 28 chr15 78530559 78530714 -24964260 + MIRb SINE MIR 34 189 -73 3 1184 732 247 31 10 chr15 78531606 78531798 -24963176 - ID_B1 SINE B4 -27 197 2 3 1184 351 324 109 54 chr15 78532011 78532262 -24962712 - MIRb SINE MIR -4 264 9 3 1184 507 287 120 9 chr15 78532305 78532515 -24962459 + MIR SINE MIR 5 230 -32 3 1184 522 0 0 0 chr15 78532532 78532590 -24962384 + (TAA)n Simple_repeat Simple_repeat 2 59 0 4 1184 852 182 0 0 chr15 78534764 78535029 -24959945 + (TG)n Simple_repeat Simple_repeat 1 265 0 4 1184 799 99 16 0 chr15 78535990 78536111 -24958863 + B1_Mur4 SINE Alu 3 125 -25 4 1184 276 100 0 0 chr15 78536111 78536151 -24958823 + (ATG)n Simple_repeat Simple_repeat 1 40 0 4 1184 840 282 38 23 chr15 78536324 78536585 -24958389 + B4 SINE B4 2 266 -26 4 1184 375 23 0 0 chr15 78536585 78536629 -24958345 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1184 183 214 0 23 chr15 78536774 78536817 -24958157 - MIR SINE MIR -115 147 106 4 1184 429 211 115 0 chr15 78537246 78537350 -24957624 + ID_B1 SINE B4 104 219 -5 4 1184 750 291 31 39 chr15 78537360 78537589 -24957385 + B4 SINE B4 3 229 -63 4 1184 421 165 10 10 chr15 78537589 78537687 -24957287 + GA-rich Low_complexity Low_complexity 1 98 0 4 1184 681 146 0 0 chr15 78537762 78537899 -24957075 + (CA)n Simple_repeat Simple_repeat 2 138 0 5 1184 1131 210 15 0 chr15 78537912 78538117 -24956857 + B3 SINE B2 5 212 -4 5 1184 198 0 0 0 chr15 78540529 78540551 -24954423 + (CCTG)n Simple_repeat Simple_repeat 4 25 0 5 1184 212 86 0 28 chr15 78541223 78541259 -24953715 + (GGGA)n Simple_repeat Simple_repeat 1 35 0 5 1184 515 296 13 16 chr15 78541372 78541796 -24953178 + GA-rich Low_complexity Low_complexity 1 422 0 5 1184 207 162 0 0 chr15 78543266 78543303 -24951671 + C-rich Low_complexity Low_complexity 4 40 0 5 1184 24 53 0 0 chr15 78543428 78543466 -24951508 + GC_rich Low_complexity Low_complexity 1 38 0 5 1184 282 29 0 0 chr15 78545139 78545174 -24949800 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1184 201 345 112 39 chr15 78545447 78545625 -24949349 + MIR SINE MIR 2 192 -70 5 1184 210 227 0 0 chr15 78546910 78546954 -24948020 + CT-rich Low_complexity Low_complexity 1 44 0 5 1184 513 0 0 0 chr15 78547097 78547154 -24947820 + (CA)n Simple_repeat Simple_repeat 1 57 0 6 1184 360 0 0 0 chr15 78547381 78547421 -24947553 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1184 182 208 0 19 chr15 78547614 78547668 -24947306 + (CA)n Simple_repeat Simple_repeat 1 53 0 6 1184 546 16 0 0 chr15 78547880 78547943 -24947031 + (GA)n Simple_repeat Simple_repeat 2 64 0 6 1184 270 0 0 0 chr15 78548149 78548179 -24946795 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1184 235 275 18 18 chr15 78548908 78549019 -24945955 + (CGTG)n Simple_repeat Simple_repeat 3 113 0 6 1184 26 50 0 0 chr15 78549312 78549352 -24945622 + GC_rich Low_complexity Low_complexity 1 40 0 6 1184 282 299 102 22 chr15 78549582 78549719 -24945255 - MIRc SINE MIR -118 150 3 6 1184 258 32 0 0 chr15 78549815 78549846 -24945128 + (CCA)n Simple_repeat Simple_repeat 2 32 0 6 1184 417 299 61 22 chr15 78550113 78550294 -24944680 - L2c LINE L2 -244 3131 2944 6 1184 552 269 136 6 chr15 78551234 78551410 -24943564 + MER3 DNA MER1_type 2 200 -9 7 1184 5436 115 55 26 chr15 78551492 78552513 -24942461 + L1_Mur2 LINE L1 4542 5591 -286 7 1184 604 221 8 23 chr15 78555305 78555435 -24939539 + RSINE1 SINE B4 2 129 -36 7 1184 330 26 0 0 chr15 78555449 78555488 -24939486 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1184 24 53 0 0 chr15 78555491 78555529 -24939445 + AT_rich Low_complexity Low_complexity 1 38 0 7 1184 517 287 69 0 chr15 78556143 78556359 -24938615 - L1MD3 LINE L1 -164 7831 7601 7 1184 286 328 81 15 chr15 78557065 78557201 -24937773 - MER45A DNA Tip100 -13 165 21 7 1184 244 285 63 84 chr15 78557484 78557626 -24937348 + Charlie25 DNA MER1_type 9 147 -2377 7 1184 261 83 0 0 chr15 78557650 78557686 -24937288 + (T)n Simple_repeat Simple_repeat 1 36 0 7 1184 189 171 0 0 chr15 78557687 78557722 -24937252 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1184 629 266 16 35 chr15 78557839 78558029 -24936945 - ID_B1 SINE B4 -60 232 49 8 1184 1055 119 21 7 chr15 78558263 78558694 -24936280 + (TAGA)n Simple_repeat Simple_repeat 1 437 0 8 1184 361 216 123 38 chr15 78559133 78559239 -24935735 - PB1D7 SINE Alu -2 118 4 8 1184 1930 143 138 0 chr15 78559566 78559943 -24935031 - RMER1B Other Other -19 1047 619 8 1184 529 204 0 0 chr15 78559942 78560055 -24934919 - RMER1B Other Other -910 156 44 8 1184 344 382 27 5 chr15 78560504 78560688 -24934286 + Charlie25 DNA MER1_type 774 961 -1563 7 1184 219 240 0 0 chr15 78560689 78560739 -24934235 + (TG)n Simple_repeat Simple_repeat 1 50 0 8 1184 658 243 141 35 chr15 78560768 78561024 -24933950 - B4A SINE B4 -9 283 1 8 1184 310 266 51 33 chr15 78561177 78561359 -24933615 - ORR1E LTR MaLR -134 250 63 8 1184 751 364 61 24 chr15 78561519 78561896 -24933078 + Charlie25 DNA MER1_type 1607 1997 -527 7 1184 780 245 80 0 chr15 78562098 78562298 -24932676 + B3 SINE B2 1 216 0 8 1184 1015 256 94 15 chr15 78562480 78562746 -24932228 + B4 SINE B4 2 288 -4 8 1184 694 155 0 27 chr15 78562777 78562923 -24932051 + (CATA)n Simple_repeat Simple_repeat 1 142 0 8 1184 522 313 48 27 chr15 78562975 78563162 -24931812 - B4A SINE B4 0 292 102 9 1184 330 26 0 0 chr15 78563741 78563780 -24931194 + (TG)n Simple_repeat Simple_repeat 1 39 0 9 1184 796 245 0 74 chr15 78563788 78563964 -24931010 - RSINE1 SINE B4 0 165 3 9 1184 949 192 13 70 chr15 78563995 78564224 -24930750 - B3 SINE B2 0 216 1 9 1184 451 258 40 32 chr15 78564321 78564445 -24930529 - ID_B1 SINE B4 -1 223 99 9 1184 207 0 0 0 chr15 78564943 78564966 -24930008 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 9 1184 774 335 77 14 chr15 78565201 78565567 -24929407 + LTR31 LTR ERV1 210 598 -21 9 1184 303 354 32 42 chr15 78565588 78565813 -24929161 - MIRb SINE MIR -30 246 23 9 1184 386 185 30 23 chr15 78566875 78567008 -24927966 + CT-rich Low_complexity Low_complexity 5 138 0 9 1184 246 279 36 63 chr15 78567920 78568031 -24926943 - MER5A DNA MER1_type -4 185 78 9 1184 231 326 77 10 chr15 78568647 78568842 -24926132 + L1M5 LINE L1 5076 5283 -863 1 1184 1211 224 35 24 chr15 78568842 78569130 -24925844 + B4A SINE B4 2 292 0 1 1184 366 216 0 0 chr15 78569130 78569255 -24925719 + (CA)n Simple_repeat Simple_repeat 1 125 0 1 1184 723 207 0 0 chr15 78569278 78569634 -24925340 + (CA)n Simple_repeat Simple_repeat 1 356 0 1 1184 883 261 127 53 chr15 78569766 78569867 -24925107 + MLT1A0 LTR MaLR 1 92 -273 1 1184 1897 82 22 4 chr15 78569867 78570135 -24924839 + L1_Mus3 LINE L1 6365 6637 -1 1 1184 883 261 127 53 chr15 78570135 78570373 -24924601 + MLT1A0 LTR MaLR 93 365 0 1 1184 503 200 69 97 chr15 78570644 78570788 -24924186 - B1_Mur2 SINE Alu -8 141 2 1 1184 1132 90 0 28 chr15 78570822 78571004 -24923970 + (GAAAA)n Simple_repeat Simple_repeat 2 178 0 1 1184 232 234 0 0 chr15 78571363 78571410 -24923564 - tRNA-Ala-GCY_ tRNA tRNA -28 47 1 1 1184 477 47 0 0 chr15 78571921 78571985 -24922989 + (ATTTG)n Simple_repeat Simple_repeat 2 65 0 1 1184 714 185 104 0 chr15 78572015 78572150 -24922824 - B1_Mur4 SINE Alu 0 150 2 1 1184 212 330 9 65 chr15 78572528 78572635 -24922339 - MIR SINE MIR -161 101 1 1 1184 189 0 0 0 chr15 78573253 78573274 -24921700 + (CG)n Simple_repeat Simple_repeat 1 21 0 1 1184 378 0 0 0 chr15 78573274 78573315 -24921659 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1184 414 0 0 0 chr15 78573370 78573416 -24921558 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1184 207 0 0 0 chr15 78574113 78574136 -24920838 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 1184 216 0 0 0 chr15 78575398 78575422 -24919552 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 1 1184 386 214 11 13 chr15 78575713 78575818 -24919156 - B1F1 SINE Alu -49 100 1 1 1184 1181 171 23 23 chr15 78575833 78576048 -24918926 - B3 SINE B2 -1 215 1 1 1184 701 251 81 32 chr15 78576545 78576730 -24918244 - B3A SINE B2 -2 196 3 1 1184 504 281 25 23 chr15 78577294 78577463 -24917511 + ID_B1 SINE B4 56 220 -4 1 1184 392 280 52 15 chr15 78577331 78577465 -24917509 + B1_Mur4 SINE Alu 9 147 -3 1 1184 261 279 12 0 chr15 78577468 78577554 -24917420 + L1M3 LINE L1 5514 5600 -580 1 1184 444 304 10 0 chr15 78577555 78577657 -24917317 + RSINE1 SINE B4 55 157 -8 1 1184 3379 46 5 0 chr15 78577731 78578125 -24916849 - MTA_Mm LTR MaLR 0 396 1 1 1184 1060 71 0 79 chr15 78578199 78578351 -24916623 + B1_Mus1 SINE Alu 2 141 -7 1 1184 465 19 0 0 chr15 78578355 78578409 -24916565 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 1184 280 121 0 171 chr15 78578409 78578479 -24916495 + B1_Mus2 SINE Alu 51 108 -39 1 1184 1954 156 3 7 chr15 78578483 78578792 -24916182 + RLTR10E LTR ERVK 1 308 -3 1 1184 1113 83 5 62 chr15 78578793 78578985 -24915989 + B2_Mm2 SINE B2 13 193 -2 1 1184 688 244 43 47 chr15 78578991 78579202 -24915772 - B4A SINE B4 -81 211 2 1 1184 255 359 36 3 chr15 78579788 78579938 -24915036 - MIRc SINE MIR -87 181 24 1 1184 330 26 0 0 chr15 78580613 78580652 -24914322 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 1 1184 782 264 52 0 chr15 78580652 78580845 -24914129 - ID_B1 SINE B4 -13 211 9 1 1184 360 318 70 31 chr15 78581868 78582095 -24912879 - L1MC5 LINE L1 -170 7791 7556 1 1184 264 228 18 0 chr15 78582610 78582667 -24912307 + B4 SINE B4 1 58 -234 1 1184 1219 61 0 0 chr15 78582668 78582815 -24912159 + B1_Mus2 SINE Alu 1 147 0 1 1184 566 319 36 36 chr15 78582836 78583086 -24911888 + B4A SINE B4 43 292 0 1 1184 814 170 4 13 chr15 78583089 78583322 -24911652 + (CA)n Simple_repeat Simple_repeat 1 230 0 1 1184 423 0 0 0 chr15 78583372 78583419 -24911555 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 1184 606 277 75 65 chr15 78584086 78584287 -24910687 + ID_B1 SINE B4 2 204 -20 1 1184 1344 222 101 56 chr15 78584529 78584924 -24910050 - MTD LTR MaLR 0 419 7 1 1184 516 32 0 0 chr15 78586117 78586179 -24908795 + (TC)n Simple_repeat Simple_repeat 2 63 0 1 1184 247 311 40 13 chr15 78586376 78586451 -24908523 - MLT1J LTR MaLR -194 318 242 1 1184 212 333 119 9 chr15 78587363 78587472 -24907502 - L3 LINE CR1 -117 4372 4252 1 1184 361 327 34 51 chr15 78587467 78587644 -24907330 - MIRm SINE MIR -75 201 28 1 1184 281 250 98 20 chr15 78588232 78588334 -24906640 + MIR SINE MIR 42 151 -111 1 1184 213 329 78 13 chr15 78588367 78588444 -24906530 - PB1D10 SINE Alu -35 82 1 1 1184 553 277 51 0 chr15 78588444 78588516 -24906458 - ID SINE ID -137 87 9 1 1184 695 311 125 13 chr15 78588525 78588828 -24906146 + MER2 DNA MER2_type 2 338 -7 1 1184 231 36 0 0 chr15 78589365 78589393 -24905581 + (TGGGGG)n Simple_repeat Simple_repeat 2 29 0 1 1184 267 253 90 0 chr15 78589919 78590010 -24904964 + MIRc SINE MIR 117 208 -60 1 1184 198 296 24 47 chr15 78590773 78590858 -24904116 + L2b LINE L2 3115 3197 -178 1 1184 205 274 20 0 chr15 78591472 78591523 -24903451 - MIRm SINE MIR -105 171 120 1 1184 227 189 37 19 chr15 78591777 78591831 -24903143 + MLT1K LTR MaLR 135 189 -406 1 1184 196 282 90 0 chr15 78592495 78592573 -24902401 + MIRb SINE MIR 182 266 -2 1 1184 1687 209 41 60 chr15 78592897 78593310 -24901664 + MTD LTR MaLR 1 405 -14 1 1184 328 324 53 26 chr15 78593471 78593623 -24901351 - MIR SINE MIR -74 188 33 1 1184 279 0 0 0 chr15 78593647 78593678 -24901296 + (G)n Simple_repeat Simple_repeat 1 31 0 1 1184 725 256 17 56 chr15 78594263 78594495 -24900479 - ID_B1 SINE B4 0 224 2 1 1184 333 0 0 0 chr15 78594669 78594706 -24900268 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1184 338 256 134 16 chr15 78595077 78595220 -24899754 - RLTR18 LTR ERVK -134 482 264 1 1184 1197 56 0 0 chr15 78595256 78595400 -24899574 + B1_Mus2 SINE Alu 4 147 0 1 1184 301 353 71 59 chr15 78595510 78595763 -24899211 - RLTR18 LTR ERVK -328 288 33 1 1184 832 188 86 5 chr15 78595774 78595961 -24899013 - URR1B DNA MER1_type -2 223 22 1 1184 791 268 103 8 chr15 78596278 78596541 -24898433 - B4 SINE B4 -4 288 1 1 1184 953 134 247 11 chr15 78596601 78596775 -24898199 - B3 SINE B2 0 216 2 1 1184 324 0 0 0 chr15 78596783 78596819 -24898155 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1184 273 308 26 0 chr15 78596920 78596998 -24897976 + RSINE1 SINE B4 86 165 0 1 1184 691 230 7 7 chr15 78597034 78597170 -24897804 + B1_Mur2 SINE Alu 1 136 -13 1 1184 342 0 0 0 chr15 78597397 78597435 -24897539 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1184 1977 161 63 3 chr15 78597908 78598288 -24896686 + MTD LTR MaLR 3 405 -14 1 1184 433 316 0 43 chr15 78598554 78598693 -24896281 - B1F SINE Alu 0 149 17 1 1184 997 172 179 32 chr15 78598889 78599135 -24895839 + ORR1B1 LTR MaLR 1 282 -112 1 1184 180 283 0 21 chr15 78599184 78599231 -24895743 + MIRb SINE MIR 120 165 -103 1 1184 928 182 9 139 chr15 78599520 78599750 -24895224 + B3 SINE B2 6 205 -11 1 1184 2623 42 70 3 chr15 78600317 78600647 -24894327 + L1_Mus1 LINE L1 6214 6565 -2 1 1184 207 0 0 0 chr15 78602852 78602875 -24892099 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1184 222 364 117 23 chr15 78604257 78604521 -24890453 + L2b LINE L2 3087 3375 0 1 1184 206 288 0 17 chr15 78604673 78604733 -24890241 + MIR SINE MIR 49 107 -101 1 1184 411 254 130 58 chr15 78604763 78604901 -24890073 + RSINE1 SINE B4 10 157 -8 1 1184 434 295 43 7 chr15 78604959 78605099 -24889875 + RSINE1 SINE B4 8 152 -13 1 1184 306 0 0 0 chr15 78605100 78605134 -24889840 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1184 209 193 35 35 chr15 78607305 78607418 -24887556 + (CATA)n Simple_repeat Simple_repeat 4 116 0 1 1184 301 210 41 55 chr15 78607589 78607735 -24887239 + (CATATA)n Simple_repeat Simple_repeat 3 146 0 1 1184 1068 16 0 0 chr15 78608869 78608995 -24885979 + (TCTCCC)n Simple_repeat Simple_repeat 6 131 0 1 1184 236 347 60 20 chr15 78609039 78609189 -24885785 + L2 LINE L2 2762 2917 -502 1 1184 241 48 47 23 chr15 78611713 78611756 -24883218 + (CACCC)n Simple_repeat Simple_repeat 3 46 0 1 1184 454 269 58 121 chr15 78613135 78613342 -24881632 - RMER30 DNA MER1_type -7 195 2 1 1184 499 241 128 173 chr15 78613566 78613664 -24881310 - ID_B1 SINE B4 -7 217 135 1 1184 1162 76 0 0 chr15 78613664 78613808 -24881166 - B1_Mus2 SINE Alu -3 144 1 1 1184 499 241 128 173 chr15 78613808 78613935 -24881039 - ID_B1 SINE B4 -90 134 2 1 1184 1137 89 7 0 chr15 78614184 78614330 -24880644 + B1_Mus1 SINE Alu 2 148 0 1 1184 204 40 0 0 chr15 78614330 78614355 -24880619 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1184 602 268 45 25 chr15 78614369 78614526 -24880448 + RSINE1 SINE B4 6 165 0 1 1184 737 268 89 30 chr15 78615716 78615985 -24878989 + B4A SINE B4 2 286 -6 1 1184 201 398 11 11 chr15 78616860 78616949 -24878025 + MIRc SINE MIR 66 154 -114 1 1184 263 234 31 0 chr15 78619405 78619469 -24875505 + B4A SINE B4 8 73 -219 1 1184 435 155 0 0 chr15 78619478 78619562 -24875412 + (CA)n Simple_repeat Simple_repeat 1 84 0 1 1184 219 179 0 0 chr15 78619564 78619603 -24875371 + B4 SINE B4 91 129 -163 1 1184 412 301 83 18 chr15 78619666 78619835 -24875139 + B3A SINE B2 3 182 -16 1 1184 245 289 0 0 chr15 78619917 78619969 -24875005 + B4A SINE B4 240 291 -1 1 1184 233 319 142 67 chr15 78620346 78620662 -24874312 - L2b LINE L2 -22 3353 3014 1 1184 702 71 9 26 chr15 78620807 78620923 -24874051 + (TCC)n Simple_repeat Simple_repeat 1 114 0 1 1184 770 101 7 80 chr15 78621852 78622003 -24872971 + URR1B DNA MER1_type 86 225 0 1 1184 901 166 7 7 chr15 78622135 78622281 -24872693 + B1_Mus1 SINE Alu 1 146 -2 2 1184 474 120 0 0 chr15 78623186 78623261 -24871713 + (TCC)n Simple_repeat Simple_repeat 1 75 0 2 1184 258 355 24 93 chr15 78623781 78623911 -24871063 - B3A SINE B2 -7 191 1 2 1184 407 115 0 0 chr15 78623911 78623986 -24870988 - BC1_Mm scRNA scRNA -8 75 1 2 1184 375 204 192 10 chr15 78625015 78625114 -24869860 + PB1D10 SINE Alu 1 117 0 2 1184 407 277 25 119 chr15 78625149 78625309 -24869665 + B1F SINE Alu 3 147 -2 2 1184 613 277 7 7 chr15 78626288 78626437 -24868537 + B1F SINE Alu 1 149 0 2 1184 333 0 0 0 chr15 78626537 78626574 -24868400 + (TC)n Simple_repeat Simple_repeat 1 37 0 2 1184 242 293 53 12 chr15 78628119 78628241 -24866733 - MIR SINE MIR -110 166 38 2 1184 527 296 50 0 chr15 78628970 78629129 -24865845 - MER20 DNA MER1_type 0 219 53 2 1184 693 219 66 19 chr15 78629132 78629329 -24865645 + ID_B1 SINE B4 6 224 -68 2 1184 207 244 0 0 chr15 78629471 78629516 -24865458 + C-rich Low_complexity Low_complexity 1 45 0 2 1184 900 101 182 6 chr15 78630094 78630253 -24864721 + B2_Mm2 SINE B2 2 188 -7 2 1184 548 53 13 0 chr15 78630258 78630334 -24864640 + (GAA)n Simple_repeat Simple_repeat 2 78 0 2 1184 516 73 0 59 chr15 78630334 78630436 -24864538 + (CAA)n Simple_repeat Simple_repeat 1 96 0 2 1184 770 200 20 33 chr15 78630453 78630603 -24864371 + B1_Mus1 SINE Alu 1 148 0 2 1184 855 139 72 7 chr15 78630942 78631080 -24863894 + B1_Mus1 SINE Alu 2 148 0 2 1184 444 200 93 25 chr15 78631505 78631623 -24863351 - B1F2 SINE Alu -15 134 9 2 1184 236 314 71 63 chr15 78631514 78631640 -24863334 - MT2B LTR ERVL -320 281 155 2 1184 345 140 0 0 chr15 78631640 78631697 -24863277 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 2 1184 479 151 118 0 chr15 78631722 78631815 -24863159 - RSINE1 SINE B4 -51 114 11 2 1184 241 268 42 0 chr15 78631905 78631976 -24862998 + MIR SINE MIR 79 152 -110 2 1184 522 0 0 0 chr15 78632423 78632481 -24862493 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 1184 236 241 89 0 chr15 78634796 78634875 -24860099 - MIR3 SINE MIR -28 180 95 2 1184 449 322 0 0 chr15 78635433 78635695 -24859279 + (CA)n Simple_repeat Simple_repeat 1 262 0 2 1184 230 136 23 0 chr15 78636319 78636363 -24858611 + (TTG)n Simple_repeat Simple_repeat 1 45 0 2 1184 421 280 0 0 chr15 78636368 78636461 -24858513 - PB1 SINE Alu -14 113 21 2 1184 180 0 0 0 chr15 78637233 78637253 -24857721 + (CCA)n Simple_repeat Simple_repeat 3 22 0 2 1184 459 315 0 0 chr15 78638812 78638939 -24856035 - B3A SINE B2 -71 127 1 2 1184 221 260 0 0 chr15 78638995 78639045 -24855929 - B1F SINE Alu -83 66 17 2 1184 213 146 0 0 chr15 78639129 78639139 -24855835 + (GA)n Simple_repeat Simple_repeat 1 10 0 2 1184 830 173 0 39 chr15 78639139 78639295 -24855679 + B1_Mur4 SINE Alu 1 150 0 2 1184 213 146 0 0 chr15 78639295 78639325 -24855649 + (GA)n Simple_repeat Simple_repeat 1 30 0 2 1184 1000 118 24 0 chr15 78639342 78639512 -24855462 + (GAAA)n Simple_repeat Simple_repeat 1 174 0 2 1184 360 320 123 0 chr15 78640128 78640350 -24854624 - MIR SINE MIR 0 262 12 2 1184 486 296 95 16 chr15 78640652 78640884 -24854090 - MLT1G LTR MaLR -247 308 65 2 1184 756 166 20 0 chr15 78640902 78641052 -24853922 + URR1B DNA MER1_type 35 204 -21 2 1184 1159 44 0 0 chr15 78641052 78641188 -24853786 + B1_Mus1 SINE Alu 2 137 -11 2 1184 454 289 0 0 chr15 78641402 78641506 -24853468 + RSINE1 SINE B4 2 105 -60 2 1184 369 0 0 0 chr15 78641508 78641549 -24853425 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1184 319 221 178 42 chr15 78641553 78641671 -24853303 + B1F SINE Alu 15 148 -1 2 1184 306 0 0 0 chr15 78641709 78641743 -24853231 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1184 297 173 35 35 chr15 78642182 78642296 -24852678 + CT-rich Low_complexity Low_complexity 4 117 0 2 1184 278 266 0 0 chr15 78642301 78642365 -24852609 + MTEb LTR MaLR 316 379 0 2 1184 274 43 42 21 chr15 78642399 78642447 -24852527 + (TAAAA)n Simple_repeat Simple_repeat 2 50 0 2 1184 1255 41 0 7 chr15 78642603 78642751 -24852223 + B1_Mm SINE Alu 1 147 0 2 1184 1612 52 0 0 chr15 78642754 78642945 -24852029 + B2_Mm1a SINE B2 2 192 -1 2 1184 1029 195 67 0 chr15 78642989 78643184 -24851790 + B3 SINE B2 1 208 -8 2 1185 568 207 17 9 chr15 78643304 78643435 -24851539 + B1_Mur1 SINE Alu 18 149 0 2 1185 388 218 296 41 chr15 78643445 78643617 -24851357 + B3 SINE B2 1 216 0 2 1185 338 221 84 0 chr15 78643633 78643728 -24851246 + L1MC LINE L1 5468 5570 -774 2 1185 23 0 0 0 chr15 78643753 78643776 -24851198 + AT_rich Low_complexity Low_complexity 1 23 0 2 1185 555 232 20 60 chr15 78643803 78643954 -24851020 - B1F1 SINE Alu 0 149 5 2 1185 511 181 100 33 chr15 78643976 78644096 -24850878 - B1_Mur2 SINE Alu 0 149 22 2 1185 680 248 81 0 chr15 78644127 78644325 -24850649 + L1MC LINE L1 5601 5814 -519 2 1185 349 255 8 94 chr15 78644325 78644442 -24850532 + ID_B1 SINE B4 80 186 -38 2 1185 257 27 0 51 chr15 78644452 78644491 -24850483 + (CCCCCA)n Simple_repeat Simple_repeat 5 41 0 2 1185 371 291 0 18 chr15 78644527 78644639 -24850335 + PB1D10 SINE Alu 1 110 -7 2 1185 356 88 18 0 chr15 78644654 78644711 -24850263 + (GGA)n Simple_repeat Simple_repeat 2 59 0 2 1185 203 149 0 41 chr15 78645082 78645131 -24849843 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2 1185 631 270 77 17 chr15 78645152 78645333 -24849641 + B3A SINE B2 6 197 -1 2 1185 1157 72 0 0 chr15 78645354 78645492 -24849482 + B1_Mus1 SINE Alu 1 138 -10 2 1185 29 28 0 0 chr15 78645502 78645538 -24849436 + AT_rich Low_complexity Low_complexity 1 36 0 2 1185 781 218 0 0 chr15 78645643 78645776 -24849198 + B1_Mur1 SINE Alu 3 135 -14 2 1185 548 236 139 0 chr15 78645877 78646085 -24848889 + L1MB5 LINE L1 5406 5642 -542 2 1185 1045 206 212 3 chr15 78646216 78646537 -24848437 + MTD LTR MaLR 18 405 -14 2 1185 270 0 0 0 chr15 78646631 78646661 -24848313 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1185 732 291 13 49 chr15 78646666 78646890 -24848084 + ID_B1 SINE B4 1 216 -8 2 1185 291 273 56 68 chr15 78646905 78647056 -24847918 + L1MB5 LINE L1 5823 5963 -211 2 1185 882 185 7 0 chr15 78647056 78647202 -24847772 + B1_Mus1 SINE Alu 2 148 0 2 1185 1180 138 31 11 chr15 78647205 78647396 -24847578 + B2_Mm2 SINE B2 1 195 0 2 1185 238 308 58 142 chr15 78647396 78647550 -24847424 + L1MB5 LINE L1 5959 6106 -78 2 1185 441 317 61 116 chr15 78647550 78647714 -24847260 - ID_B1 SINE B4 -50 242 84 2 1185 267 122 0 0 chr15 78647780 78647821 -24847153 - RSINE1 SINE B4 -47 118 78 2 1185 1526 68 0 10 chr15 78648056 78648249 -24846725 - B2_Mm2 SINE B2 -4 191 1 2 1185 692 192 310 39 chr15 78648249 78648266 -24846708 - ORR1A4 LTR MaLR -42 352 336 2 1185 261 0 0 0 chr15 78648266 78648295 -24846679 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 1185 920 192 310 39 chr15 78648295 78648532 -24846442 - ORR1A4 LTR MaLR -59 335 1 2 1185 318 237 58 58 chr15 78648535 78648549 -24846425 + L1MDa LINE L1 2441 2454 -4179 2 1185 1232 54 0 0 chr15 78648549 78648696 -24846278 + B1_Mus2 SINE Alu 1 147 0 2 1185 318 279 66 43 chr15 78648696 78648854 -24846120 + L1MDa LINE L1 2455 2543 -4090 2 1185 325 203 0 15 chr15 78649160 78649225 -24845749 + B1_Mur1 SINE Alu 83 146 -3 2 1185 1562 63 16 0 chr15 78649283 78649474 -24845500 + B2_Mm2 SINE B2 2 195 0 2 1185 362 299 86 8 chr15 78649476 78649604 -24845370 - MLT1D LTR MaLR -36 469 332 2 1185 353 228 25 0 chr15 78649697 78649776 -24845198 + ID_B1 SINE B4 76 156 -68 2 1185 424 261 71 18 chr15 78649816 78649929 -24845045 - B1F SINE Alu -12 137 19 2 1185 505 224 133 13 chr15 78650036 78650194 -24844780 - MLT1D LTR MaLR -307 198 22 2 1185 1053 65 65 0 chr15 78650245 78650383 -24844591 + B1_Mus1 SINE Alu 2 148 0 2 1185 273 57 0 0 chr15 78650385 78650420 -24844554 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 2 1185 21 0 0 0 chr15 78650421 78650442 -24844532 + AT_rich Low_complexity Low_complexity 1 21 0 2 1185 1561 48 0 11 chr15 78650445 78650633 -24844341 + B2_Mm1a SINE B2 2 187 -6 2 1185 501 59 0 0 chr15 78650865 78650933 -24844041 - B2_Mm2 SINE B2 -127 68 1 2 1185 628 221 73 6 chr15 78651039 78651203 -24843771 - MTD LTR MaLR 0 419 245 2 1185 1655 31 0 16 chr15 78651951 78652145 -24842829 - B2_Mm1a SINE B2 -2 191 1 2 1185 1256 34 0 7 chr15 78652937 78653085 -24841889 + B1_Mm SINE Alu 1 147 0 2 1185 23 0 0 0 chr15 78653251 78653274 -24841700 + AT_rich Low_complexity Low_complexity 1 23 0 2 1185 333 0 0 0 chr15 78653386 78653423 -24841551 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1185 642 128 9 27 chr15 78653530 78653642 -24841332 - MTD LTR MaLR -105 316 207 2 1185 2434 162 86 12 chr15 78653642 78654130 -24840844 + RLTR28 LTR ERVL 1 524 0 2 1185 1367 115 10 0 chr15 78654141 78654333 -24840641 - B2_Mm2 SINE B2 0 195 2 2 1185 871 218 66 5 chr15 78654333 78654531 -24840443 - MTD LTR MaLR -209 210 1 2 1185 241 220 20 0 chr15 78654772 78654822 -24840152 - MTEb LTR MaLR -6 373 323 2 1185 280 83 0 48 chr15 78654838 78654852 -24840122 + (CAAAAA)n Simple_repeat Simple_repeat 1 14 0 2 1185 1221 47 0 7 chr15 78654852 78655001 -24839973 + B1_Mus1 SINE Alu 1 148 0 2 1185 280 83 0 48 chr15 78655001 78655049 -24839925 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 2 1185 232 255 0 38 chr15 78655059 78655112 -24839862 + ID SINE ID 8 58 -166 2 1185 1284 104 6 6 chr15 78655116 78655275 -24839699 + B2_Mm1a SINE B2 1 160 -33 2 1185 339 25 0 0 chr15 78655275 78655315 -24839659 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 3 1185 1284 104 6 6 chr15 78655315 78655338 -24839636 + B2_Mm1a SINE B2 161 183 -10 2 1185 840 231 103 74 chr15 78655400 78655817 -24839157 + RMER2 LTR ERV1 24 546 -21 3 1185 541 205 51 36 chr15 78655838 78655975 -24838999 + ID_B1 SINE B4 86 224 0 2 1185 195 42 0 0 chr15 78655980 78656004 -24838970 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 3 1185 1013 257 45 56 chr15 78656023 78656311 -24838663 + B4 SINE B4 8 292 0 3 1185 642 169 0 0 chr15 78656466 78656584 -24838390 + GA-rich Low_complexity Low_complexity 3 120 0 3 1185 24 0 0 0 chr15 78656655 78656679 -24838295 + GC_rich Low_complexity Low_complexity 1 24 0 3 1185 255 333 28 9 chr15 78657502 78657611 -24837363 + MLT1C LTR MaLR 357 467 0 3 1185 472 219 35 24 chr15 78658031 78658196 -24836778 - B4A SINE B4 0 165 1 3 1185 964 68 0 0 chr15 78659457 78659589 -24835385 + B2_Mm2 SINE B2 2 133 -62 3 1185 456 124 22 33 chr15 78659612 78659704 -24835270 + B1_Mur4 SINE Alu 60 150 0 3 1185 221 0 0 33 chr15 78659722 78659752 -24835222 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 3 1185 180 191 0 0 chr15 78659756 78659772 -24835202 + A-rich Low_complexity Low_complexity 1 16 0 3 1185 1235 62 0 0 chr15 78659772 78659918 -24835056 + B1_Mus2 SINE Alu 2 147 0 3 1185 180 191 0 0 chr15 78659918 78659943 -24835031 + A-rich Low_complexity Low_complexity 17 41 0 3 1185 369 268 10 20 chr15 78659956 78660055 -24834919 + B4A SINE B4 2 99 -193 3 1185 535 86 0 41 chr15 78660068 78660165 -24834809 + (TTTC)n Simple_repeat Simple_repeat 2 94 0 3 1185 890 161 58 48 chr15 78660175 78660364 -24834610 - B2_Mm2 SINE B2 -3 192 2 3 1185 325 103 40 30 chr15 78660366 78660466 -24834508 + T-rich Low_complexity Low_complexity 1 101 0 3 1185 621 184 28 28 chr15 78660466 78660611 -24834363 - B1_Mur4 SINE Alu 0 150 6 3 1185 439 219 164 17 chr15 78660621 78660737 -24834237 + B4A SINE B4 98 230 -62 3 1185 318 289 9 118 chr15 78660741 78660851 -24834123 + B1_Mur2 SINE Alu 5 102 -47 3 1185 1206 41 7 14 chr15 78661000 78661147 -24833827 + B1_Mm SINE Alu 2 147 0 3 1185 329 291 26 43 chr15 78661520 78661635 -24833339 - MIRb SINE MIR -93 175 63 3 1185 279 0 0 0 chr15 78663793 78663824 -24831150 + (TGG)n Simple_repeat Simple_repeat 1 31 0 3 1185 209 333 37 0 chr15 78663845 78663926 -24831048 + MIRc SINE MIR 33 116 -152 3 1185 205 333 20 40 chr15 78664455 78664555 -24830419 - MIR SINE MIR -64 198 101 3 1185 228 197 48 32 chr15 78665084 78665147 -24829827 + MIR SINE MIR 78 141 -67 3 1185 327 300 22 30 chr15 78665456 78665590 -24829384 - MIR SINE MIR -109 153 21 3 1185 654 79 0 0 chr15 78667271 78667360 -24827614 + (GAAA)n Simple_repeat Simple_repeat 4 92 0 3 1185 1298 165 14 0 chr15 78667378 78667590 -24827384 + B3 SINE B2 1 215 -1 3 1185 1068 161 229 54 chr15 78667597 78667716 -24827258 + RMER17C LTR ERVK 1 184 -226 3 1185 980 111 7 0 chr15 78667716 78667869 -24827105 + (TCC)n Simple_repeat Simple_repeat 2 155 0 3 1185 1068 161 229 54 chr15 78667869 78668098 -24826876 + RMER17C LTR ERVK 185 410 0 3 1185 450 187 0 0 chr15 78668100 78668175 -24826799 - tRNA-His-CAY_ tRNA tRNA 0 75 1 3 1185 671 139 90 0 chr15 78668211 78668333 -24826641 - LSU-rRNA_Hsa rRNA rRNA -3384 1651 1519 3 1185 25 31 0 0 chr15 78668358 78668390 -24826584 + AT_rich Low_complexity Low_complexity 1 32 0 3 1185 910 148 35 0 chr15 78668391 78668533 -24826441 + B1_Mus1 SINE Alu 1 147 -1 3 1185 1253 74 109 0 chr15 78668600 78668775 -24826199 + B2_Mm2 SINE B2 2 195 0 3 1185 1681 16 21 0 chr15 78668778 78668967 -24826007 + B2_Mm1a SINE B2 1 193 0 3 1185 1256 54 0 0 chr15 78668976 78669124 -24825850 + B1_Mus1 SINE Alu 1 148 0 3 1185 576 194 0 0 chr15 78669475 78669599 -24825375 + (TG)n Simple_repeat Simple_repeat 2 125 0 3 1185 296 353 23 0 chr15 78669784 78669917 -24825057 + (TGGG)n Simple_repeat Simple_repeat 1 136 0 3 1185 232 325 100 0 chr15 78670682 78670762 -24824212 + MIRb SINE MIR 91 178 -90 3 1185 628 239 14 42 chr15 78670910 78671054 -24823920 + B1_Mur1 SINE Alu 9 148 -1 3 1185 260 300 0 41 chr15 78671215 78671288 -24823686 - MER94 DNA AcHobo -12 122 53 3 1185 213 343 185 28 chr15 78671336 78671444 -24823530 + MIR SINE MIR 94 218 -50 3 1185 220 292 14 27 chr15 78671680 78671754 -24823220 + MIRb SINE MIR 117 189 -79 3 1185 347 303 17 38 chr15 78672229 78672282 -24822692 - B3 SINE B2 -68 125 74 3 1185 393 22 0 0 chr15 78672282 78672328 -24822646 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1185 350 212 0 1 chr15 78672328 78672401 -24822573 - B3A SINE B2 -143 73 1 3 1185 639 39 0 0 chr15 78672626 78672704 -24822270 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 3 1185 30 83 0 0 chr15 78672966 78673038 -24821936 + GC_rich Low_complexity Low_complexity 1 72 0 3 1185 23 0 0 0 chr15 78673105 78673128 -24821846 + GC_rich Low_complexity Low_complexity 1 23 0 3 1185 371 240 18 55 chr15 78673795 78673905 -24821069 + PB1D10 SINE Alu 9 114 -3 3 1185 21 0 0 0 chr15 78675707 78675728 -24819246 + AT_rich Low_complexity Low_complexity 1 21 0 3 1185 201 309 202 8 chr15 78676014 78676138 -24818836 + MIR3 SINE MIR 37 184 -24 3 1185 586 366 7 68 chr15 78676900 78677181 -24817793 - B4A SINE B4 0 292 29 3 1185 1282 41 0 0 chr15 78677248 78677395 -24817579 - B1_Mm SINE Alu 0 147 1 3 1185 1245 34 0 7 chr15 78678691 78678839 -24816135 + B1_Mm SINE Alu 1 147 0 3 1185 355 193 0 129 chr15 78678847 78678948 -24816026 + B1_Mur2 SINE Alu 62 149 0 3 1185 227 241 17 17 chr15 78682487 78682546 -24812428 - LTR39 LTR ERV1 -406 377 319 3 1185 334 246 69 99 chr15 78683084 78683106 -24811868 + MT2B LTR ERVL 137 154 -447 3 1185 744 160 0 8 chr15 78683106 78683226 -24811748 + B1_Mur1 SINE Alu 2 120 -29 3 1185 403 216 0 93 chr15 78683239 78683346 -24811628 + B4 SINE B4 99 195 -97 3 1185 273 333 23 70 chr15 78683346 78683368 -24811606 + B1F2 SINE Alu 14 136 -13 3 1185 451 132 20 99 chr15 78683379 78683450 -24811524 + B1_Mur4 SINE Alu 57 124 -26 3 1185 193 0 94 0 chr15 78683450 78683482 -24811492 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3 1185 451 132 20 99 chr15 78683482 78683511 -24811463 + B1_Mur4 SINE Alu 125 149 -1 3 1185 300 297 43 0 chr15 78683901 78684007 -24810967 + MIR SINE MIR 41 151 -57 3 1185 450 124 34 0 chr15 78684233 78684322 -24810652 + (TA)n Simple_repeat Simple_repeat 2 93 0 3 1185 524 234 7 0 chr15 78684808 78684949 -24810025 + CT-rich Low_complexity Low_complexity 1 142 0 3 1185 626 291 70 25 chr15 78684949 78685150 -24809824 - ID_B1 SINE B4 0 224 15 3 1185 226 275 0 121 chr15 78685181 78685272 -24809702 - ID2 SINE ID -3 80 1 3 1185 914 145 7 14 chr15 78685451 78685591 -24809383 - B1_Mus2 SINE Alu -7 140 2 3 1185 879 74 157 0 chr15 78685662 78685783 -24809191 + B1_Mus1 SINE Alu 1 140 -8 3 1185 264 59 0 0 chr15 78685783 78685817 -24809157 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 3 1185 495 270 17 0 chr15 78686429 78686544 -24808430 - PB1D10 SINE Alu 0 117 1 3 1185 890 226 0 12 chr15 78686582 78686743 -24808231 + RSINE1 SINE B4 3 161 -4 3 1185 1645 26 0 10 chr15 78687287 78687479 -24807495 + B2_Mm2 SINE B2 3 192 -3 3 1185 181 233 51 82 chr15 78687788 78687886 -24807088 - L3 LINE CR1 -3567 922 828 3 1185 338 186 101 20 chr15 78687984 78688083 -24806891 - B1F SINE Alu -1 148 42 3 1185 345 273 0 13 chr15 78688085 78688163 -24806811 - B4A SINE B4 -209 83 7 3 1185 253 346 51 73 chr15 78688160 78688297 -24806677 + MLT1A0 LTR MaLR 25 158 -402 3 1185 448 268 118 0 chr15 78688353 78688480 -24806494 + ID_B1 SINE B4 82 223 -1 3 1185 238 310 12 142 chr15 78688480 78688522 -24806452 + B1_Mur2 SINE Alu 1 147 -2 3 1185 302 344 39 19 chr15 78688629 78688783 -24806191 + MLT1A0 LTR MaLR 209 365 0 3 1185 287 219 126 63 chr15 78688918 78689045 -24805929 + MLT1F2 LTR MaLR 374 508 -52 3 1185 737 189 0 86 chr15 78689047 78689209 -24805765 - B1_Mur2 SINE Alu 0 149 2 3 1185 360 314 65 37 chr15 78689471 78689673 -24805301 - B4A SINE B4 -2 290 1 3 1185 320 276 99 3 chr15 78689676 78689794 -24805180 - B1F SINE Alu 0 149 30 3 1185 646 208 0 8 chr15 78689930 78690056 -24804918 + B3 SINE B2 75 199 -17 3 1185 193 311 120 49 chr15 78690341 78690483 -24804491 + MIRm SINE MIR 1 152 -124 3 1185 252 262 0 149 chr15 78690504 78690598 -24804376 + PB1D7 SINE Alu 27 106 -11 3 1185 1024 143 0 7 chr15 78690610 78690758 -24804216 - B1_Mur3 SINE Alu -2 147 1 3 1185 237 185 18 18 chr15 78690776 78690831 -24804143 - MTEb LTR MaLR 0 379 325 3 1185 1228 256 73 20 chr15 78690838 78690878 -24804096 + MTE2b LTR MaLR 3 42 -337 3 1185 912 148 242 0 chr15 78690878 78691060 -24803914 + URR1A DNA MER1_type 1 226 0 3 1185 1228 256 73 20 chr15 78691060 78691328 -24803646 + MTE2b LTR MaLR 43 330 -49 3 1185 1132 73 75 48 chr15 78691328 78691515 -24803459 - B2_Mm2 SINE B2 0 195 4 3 1185 1228 256 73 20 chr15 78691515 78691559 -24803415 + MTE2b LTR MaLR 331 374 -5 3 1185 247 324 9 79 chr15 78691868 78691896 -24803078 - MTEb LTR MaLR -273 106 1 3 1185 268 294 47 12 chr15 78691896 78691982 -24802992 - MLT2B3 LTR ERVL -465 89 1 3 1185 956 163 0 13 chr15 78691984 78692133 -24802841 + B1_Mur3 SINE Alu 2 148 -1 3 1185 491 279 18 0 chr15 78692150 78692261 -24802713 + PB1D7 SINE Alu 2 114 -6 3 1185 463 280 41 20 chr15 78692270 78692416 -24802558 + ID_B1 SINE B4 3 151 -73 3 1185 379 359 14 0 chr15 78692794 78692936 -24802038 + MIRb SINE MIR 76 219 -49 3 1185 1173 37 0 0 chr15 78693178 78693314 -24801660 + B1_Mus2 SINE Alu 2 137 -10 3 1185 468 51 0 0 chr15 78693314 78693373 -24801601 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 1185 964 137 7 7 chr15 78693377 78693524 -24801450 + B1_Mus1 SINE Alu 2 148 0 4 1185 240 122 0 0 chr15 78693526 78693567 -24801407 + (A)n Simple_repeat Simple_repeat 1 41 0 4 1185 866 259 203 13 chr15 78693674 78693975 -24800999 - MTEb LTR MaLR -6 373 16 4 1185 385 302 24 29 chr15 78693944 78694090 -24800884 + MLT1A1 LTR MaLR 312 467 0 4 1185 249 319 33 83 chr15 78694400 78694581 -24800393 + L2 LINE L2 2799 2970 -449 4 1185 319 230 139 10 chr15 78694683 78694784 -24800190 + PB1D9 SINE Alu 7 120 0 4 1185 673 234 149 15 chr15 78694815 78694957 -24800017 + B4 SINE B4 3 162 -130 4 1185 207 0 0 0 chr15 78694957 78694980 -24799994 + (CAGA)n Simple_repeat Simple_repeat 1 23 0 4 1185 673 234 149 15 chr15 78694980 78695032 -24799942 + B4 SINE B4 163 222 -70 4 1185 592 174 139 8 chr15 78695041 78695163 -24799811 + B1_Mur1 SINE Alu 12 149 0 4 1185 294 159 0 0 chr15 78695222 78695291 -24799683 + GA-rich Low_complexity Low_complexity 2 70 0 4 1185 565 307 157 64 chr15 78695759 78696081 -24798893 - MT2A LTR ERVL -1 553 1 4 1185 382 331 39 0 chr15 78696081 78696208 -24798766 - MTEb LTR MaLR -247 132 1 4 1185 485 227 21 0 chr15 78696217 78696314 -24798660 + MTEb LTR MaLR 23 121 -258 4 1185 1014 214 0 22 chr15 78696314 78696539 -24798435 - MERVL_2A-int LTR ERVL -5401 360 141 4 1185 544 276 47 93 chr15 78696550 78696786 -24798188 + MTEb LTR MaLR 130 354 -25 4 1185 837 148 37 0 chr15 78696880 78697015 -24797959 - B1_Mm SINE Alu -7 140 1 4 1185 237 358 99 7 chr15 78697079 78697230 -24797744 - MIRb SINE MIR -67 201 38 4 1185 213 39 0 0 chr15 78697318 78697344 -24797630 + (CAGA)n Simple_repeat Simple_repeat 3 28 0 4 1185 729 127 95 0 chr15 78697507 78697633 -24797341 - B1_Mur4 SINE Alu 0 150 13 4 1185 1481 70 0 5 chr15 78697722 78697910 -24797064 + B2_Mm2 SINE B2 1 187 -8 4 1185 180 77 0 0 chr15 78697933 78697959 -24797015 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 1185 479 282 0 58 chr15 78698457 78698507 -24796467 - ID_B1 SINE B4 -4 220 176 4 1185 791 223 0 7 chr15 78698507 78698656 -24796318 - B1_Mur3 SINE Alu -1 148 1 4 1185 479 282 0 58 chr15 78698656 78698744 -24796230 - ID_B1 SINE B4 -49 175 90 4 1185 622 315 97 34 chr15 78698755 78699166 -24795808 + L1MB5 LINE L1 5694 6130 -44 4 1185 522 287 0 42 chr15 78699178 78699241 -24795733 + B1F SINE Alu 1 60 -89 4 1185 1103 264 62 137 chr15 78699241 78699772 -24795202 + MT2A LTR ERVL 1 490 -43 4 1185 917 118 0 56 chr15 78699772 78699916 -24795058 - B1_Mur2 SINE Alu -13 136 1 4 1185 1103 264 62 137 chr15 78699916 78699960 -24795014 + MT2A LTR ERVL 491 533 0 4 1185 522 287 0 42 chr15 78699960 78700038 -24794936 + B1F SINE Alu 61 136 -13 4 1185 180 0 0 0 chr15 78700038 78700058 -24794916 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 4 1185 679 238 21 7 chr15 78700556 78700700 -24794274 + B3A SINE B2 1 146 -52 4 1185 1250 48 0 0 chr15 78700718 78700865 -24794109 - B1_Mm SINE Alu 0 147 1 4 1185 1197 140 128 36 chr15 78700908 78701182 -24793792 - ORR1C2 LTR MaLR -12 372 74 4 1185 1517 69 0 5 chr15 78701187 78701377 -24793597 - B2_Mm2 SINE B2 -6 189 1 4 1185 648 178 9 33 chr15 78701378 78701571 -24793403 - RMER19B LTR ERVK -728 174 5 4 1185 613 146 0 0 chr15 78701577 78701673 -24793301 - ORR1C2 LTR MaLR -278 96 1 4 1185 442 259 76 17 chr15 78701823 78701941 -24793033 + ID_B1 SINE B4 82 206 -18 4 1185 222 308 110 83 chr15 78701941 78701968 -24793006 + B1_Mur3 SINE Alu 1 149 0 4 1185 824 123 1 0 chr15 78702039 78702174 -24792800 - B1_Mur3 SINE Alu 0 149 14 4 1185 318 254 14 0 chr15 78702299 78702370 -24792604 - ID2 SINE ID -7 76 5 4 1185 286 327 106 0 chr15 78702385 78702498 -24792476 - PB1 SINE Alu -2 125 1 4 1185 223 324 10 39 chr15 78702506 78702630 -24792344 - MIRc SINE MIR -97 179 62 4 1185 255 133 0 0 chr15 78703034 78703079 -24791895 + (GGAA)n Simple_repeat Simple_repeat 2 46 0 4 1185 248 264 0 65 chr15 78703168 78703245 -24791729 + IAPLTR4 LTR ERVK 216 287 -58 4 1185 272 271 58 12 chr15 78703349 78703435 -24791539 + PB1D10 SINE Alu 22 111 -6 4 1185 446 292 0 0 chr15 78703494 78703600 -24791374 - B1F SINE Alu -1 148 43 4 1185 417 141 103 0 chr15 78703602 78703680 -24791294 - PB1D9 SINE Alu -12 108 23 4 1185 227 306 34 45 chr15 78703609 78703698 -24791276 - MT2B LTR ERVL -348 253 166 4 1185 320 143 36 0 chr15 78703725 78703781 -24791193 - B1_Mur1 SINE Alu -21 128 71 4 1185 21 0 0 0 chr15 78703802 78703823 -24791151 + AT_rich Low_complexity Low_complexity 1 21 0 4 1185 1202 54 0 20 chr15 78703876 78704026 -24790948 + B1_Mus2 SINE Alu 1 147 0 4 1185 929 154 0 0 chr15 78704091 78704227 -24790747 + B1_Mus1 SINE Alu 5 140 -8 4 1185 304 272 79 16 chr15 78704601 78704728 -24790246 + ID_B1 SINE B4 3 137 -87 4 1185 578 242 150 16 chr15 78704836 78704931 -24790043 - ID_B1 SINE B4 -4 220 2 4 1185 718 82 0 0 chr15 78704931 78705029 -24789945 - B2_Mm2 SINE B2 -96 99 2 4 1185 569 259 106 35 chr15 78705127 78705493 -24789481 + RLTR28B LTR ERVL 1 443 -38 4 1185 1075 266 119 26 chr15 78705584 78705928 -24789046 + MTE2b LTR MaLR 1 376 -3 4 1185 184 146 146 0 chr15 78705928 78705969 -24789005 - L3 LINE CR1 -2334 2155 2109 4 1185 487 201 312 6 chr15 78706135 78706295 -24788679 + ID_B1 SINE B4 4 212 -12 4 1185 781 107 120 15 chr15 78706365 78706498 -24788476 - B1_Mus1 SINE Alu 0 148 2 4 1185 227 250 153 0 chr15 78707021 78707093 -24787881 - PB1D10 SINE Alu -9 108 26 4 1185 742 224 7 0 chr15 78707303 78707450 -24787524 + B1_Mur2 SINE Alu 2 149 0 4 1185 34 24 0 0 chr15 78707957 78707998 -24786976 + GC_rich Low_complexity Low_complexity 1 41 0 4 1185 26 88 0 0 chr15 78708119 78708187 -24786787 + GC_rich Low_complexity Low_complexity 1 68 0 4 1185 3381 43 2 2 chr15 78709131 78709527 -24785447 - MTA_Mm LTR MaLR 0 396 1 4 1185 201 74 0 0 chr15 78709617 78709644 -24785330 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 1185 228 221 36 72 chr15 78712239 78712322 -24782652 - ID4 SINE ID -3 80 1 4 1185 1196 68 0 7 chr15 78712831 78712979 -24781995 - B1_Mus1 SINE Alu 0 148 2 4 1185 890 145 65 0 chr15 78713350 78713488 -24781486 + B1_Mur4 SINE Alu 2 148 -2 4 1185 880 216 90 5 chr15 78714840 78715040 -24779934 + ID_B1 SINE B4 1 217 -7 4 1185 671 299 24 0 chr15 78715049 78715213 -24779761 + B3A SINE B2 1 168 -30 4 1185 1315 20 0 0 chr15 78715293 78715441 -24779533 - B1_Mus1 SINE Alu 0 148 1 4 1185 233 315 10 98 chr15 78716602 78716704 -24778270 + MT2B2 LTR ERVL 163 255 -329 4 1185 532 233 0 0 chr15 78716614 78716717 -24778257 + PB1D10 SINE Alu 10 112 -5 4 1185 456 308 90 8 chr15 78716744 78716878 -24778096 + RSINE1 SINE B4 3 147 -18 4 1185 324 0 0 0 chr15 78716879 78716915 -24778059 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1185 239 304 25 12 chr15 78716950 78717030 -24777944 + ID4_ SINE ID 1 81 -2 4 1185 236 275 123 12 chr15 78716985 78717066 -24777908 + RLTR22_Mur LTR ERVK 1260 1349 -499 4 1185 1229 34 0 20 chr15 78717105 78717255 -24777719 - B1_Mus2 SINE Alu 0 147 1 4 1185 350 265 89 53 chr15 78717307 78717327 -24777647 + ID_B1 SINE B4 78 156 -136 4 1185 561 206 55 8 chr15 78717327 78717454 -24777520 + B1_Mur2 SINE Alu 17 149 0 4 1185 350 265 89 53 chr15 78717454 78717474 -24777500 + ID_B1 SINE B4 157 247 -45 4 1185 576 188 26 43 chr15 78717474 78717591 -24777383 + PB1D7 SINE Alu 5 119 -1 4 1185 300 298 113 74 chr15 78717591 78717626 -24777348 + B4A SINE B4 248 287 -5 4 1185 271 163 9 37 chr15 78718693 78718801 -24776173 + (CACCC)n Simple_repeat Simple_repeat 4 108 0 4 1185 198 0 0 0 chr15 78720064 78720086 -24774888 + (GGA)n Simple_repeat Simple_repeat 1 22 0 4 1185 2757 96 40 5 chr15 78720674 78721073 -24773901 - L1_Mus4 LINE L1 0 6636 6224 4 1185 848 128 23 0 chr15 78721107 78721240 -24773734 - B1_Mus1 SINE Alu -1 147 12 4 1185 254 342 0 0 chr15 78725536 78725612 -24769362 - MER103 DNA DNA -72 94 19 4 1185 210 159 45 0 chr15 78727324 78727368 -24767606 - MIR SINE MIR -36 226 181 4 1185 216 254 103 15 chr15 78727720 78727788 -24767186 + PB1D10 SINE Alu 11 84 -33 4 1185 258 235 0 56 chr15 78727769 78727841 -24767133 + RSINE1 SINE B4 59 126 -39 4 1185 245 176 18 73 chr15 78727858 78727913 -24767061 + ID SINE ID 23 74 -150 4 1185 211 266 15 59 chr15 78727913 78727925 -24767049 + BC1_Mm scRNA scRNA 22 85 -67 4 1185 1153 102 36 41 chr15 78728620 78728815 -24766159 - B2_Mm2 SINE B2 -1 194 1 4 1185 567 0 0 0 chr15 78730020 78730083 -24764891 + (GA)n Simple_repeat Simple_repeat 2 64 0 4 1185 203 321 157 24 chr15 78732136 78732302 -24762672 - MIRb SINE MIR -48 220 30 4 1185 257 229 134 0 chr15 78732336 78732475 -24762499 + B3A SINE B2 1 159 -36 4 1185 239 216 0 0 chr15 78732929 78732980 -24761994 + C-rich Low_complexity Low_complexity 1 51 0 4 1185 227 31 31 0 chr15 78734403 78734435 -24760539 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 4 1185 543 209 0 0 chr15 78735057 78735162 -24759812 + B1_Mm SINE Alu 1 105 -42 4 1185 751 175 29 21 chr15 78737078 78737218 -24757756 + B1_Mus2 SINE Alu 7 147 0 4 1185 327 212 207 25 chr15 78737245 78737366 -24757608 + B1F SINE Alu 1 143 -6 4 1185 471 159 45 0 chr15 78737281 78737369 -24757605 + ID_B1 SINE B4 130 221 -3 4 1185 227 348 14 0 chr15 78738254 78738323 -24756651 + MER117 DNA MER1_type 124 193 -4 4 1185 248 297 25 40 chr15 78738553 78738661 -24756313 + MIR SINE MIR 58 171 -97 5 1185 228 222 0 0 chr15 78738880 78738925 -24756049 + (CCCCAG)n Simple_repeat Simple_repeat 3 47 0 5 1185 194 241 0 36 chr15 78739094 78739150 -24755824 - L2a LINE L2 -1 3425 3372 5 1185 703 254 91 24 chr15 78739558 78739768 -24755206 + ID_B1 SINE B4 1 224 0 5 1185 978 268 134 52 chr15 78739852 78740129 -24754845 - MTD LTR MaLR -14 405 105 5 1185 189 0 0 0 chr15 78740129 78740150 -24754824 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 1185 978 265 139 55 chr15 78740150 78740250 -24754724 - MTD LTR MaLR -315 104 8 5 1185 202 229 0 0 chr15 78743454 78743502 -24751472 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 5 1185 637 197 56 0 chr15 78743507 78743649 -24751325 - B1_Mur4 SINE Alu 0 150 1 5 1185 521 285 30 8 chr15 78743675 78743806 -24751168 - RSINE1 SINE B4 -28 137 4 5 1185 202 366 75 0 chr15 78745501 78745594 -24749380 - MIRm SINE MIR -115 161 62 5 1185 186 43 0 0 chr15 78745608 78745631 -24749343 + (TCCA)n Simple_repeat Simple_repeat 1 23 0 5 1185 249 168 80 3 chr15 78747193 78747251 -24747723 - B1F SINE Alu -4 145 53 5 1185 1242 271 69 17 chr15 78747278 78747627 -24747347 - ORR1D2 LTR MaLR -2 368 2 5 1185 1257 40 0 13 chr15 78747670 78747820 -24747154 - B1_Mus1 SINE Alu 0 148 1 5 1185 276 233 0 0 chr15 78747821 78747885 -24747089 + MIRm SINE MIR 96 159 -109 5 1185 240 333 39 39 chr15 78749464 78749592 -24745382 - RMER12 LTR ERVK -101 1221 1094 5 1185 293 330 50 0 chr15 78749541 78749641 -24745333 + PB1D7 SINE Alu 11 115 -5 5 1185 870 154 44 0 chr15 78750129 78750265 -24744709 + B1_Mur3 SINE Alu 3 144 -5 5 1185 242 297 40 13 chr15 78750265 78750333 -24744641 + B4 SINE B4 222 292 0 5 1185 419 170 196 20 chr15 78750936 78751038 -24743936 + PB1D9 SINE Alu 1 120 0 5 1185 1369 98 0 49 chr15 78751225 78751428 -24743546 + B2_Mm2 SINE B2 2 194 -1 5 1185 225 0 0 0 chr15 78751562 78751587 -24743387 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1185 1305 20 0 0 chr15 78751587 78751734 -24743240 - B1_Mus2 SINE Alu 0 147 1 5 1185 594 237 7 29 chr15 78751766 78751905 -24743069 - B3 SINE B2 -16 200 65 5 1185 1052 268 58 42 chr15 78751905 78752216 -24742758 + MTEb LTR MaLR 50 365 -14 5 1185 1440 265 68 11 chr15 78752234 78752616 -24742358 + MTEb-int LTR MaLR 1 404 -1176 5 1185 249 301 42 63 chr15 78752655 78752797 -24742177 + MIR3 SINE MIR 66 204 -4 5 1185 298 247 233 11 chr15 78753562 78753652 -24741322 + PB1D7 SINE Alu 1 110 -10 5 1185 675 281 83 46 chr15 78754567 78754793 -24740181 + ID_B1 SINE B4 6 248 -44 5 1185 436 31 46 0 chr15 78754924 78754989 -24739985 + (GTTTG)n Simple_repeat Simple_repeat 2 69 0 5 1185 746 225 0 7 chr15 78754989 78755128 -24739846 - B1_Mur4 SINE Alu -10 140 3 5 1185 341 63 12 71 chr15 78755145 78755166 -24739808 + (TTTTTG)n Simple_repeat Simple_repeat 1 18 0 5 1185 1223 42 7 0 chr15 78755166 78755310 -24739664 - B1_Mus1 SINE Alu 0 148 4 5 1185 341 63 12 71 chr15 78755310 78755373 -24739601 + (TTTTTG)n Simple_repeat Simple_repeat 5 66 0 5 1185 413 184 122 0 chr15 78755373 78755471 -24739503 - PB1D10 SINE Alu 0 117 8 5 1185 246 224 99 30 chr15 78755932 78756033 -24738941 + L2 LINE L2 2813 2920 -499 5 1185 355 313 52 12 chr15 78756203 78756352 -24738622 + L2b LINE L2 3257 3423 -3 5 1185 269 208 171 70 chr15 78757268 78757397 -24737577 + MIR3 SINE MIR 11 152 -56 5 1185 201 167 0 23 chr15 78758752 78758795 -24736179 + G-rich Low_complexity Low_complexity 6 47 0 5 1185 23 33 0 0 chr15 78758884 78758914 -24736060 + GC_rich Low_complexity Low_complexity 1 30 0 5 1185 180 375 0 0 chr15 78758917 78758973 -24736001 + MIRc SINE MIR 83 138 -130 5 1185 559 237 69 0 chr15 78758979 78759110 -24735864 - B1_Mur1 SINE Alu 0 149 10 5 1185 1230 62 0 0 chr15 78759337 78759483 -24735491 - B1_Mm SINE Alu 0 147 2 5 1185 1022 24 0 0 chr15 78759509 78759636 -24735338 - B1_Mm SINE Alu 0 147 21 5 1185 220 300 29 0 chr15 78759670 78759740 -24735234 - L2b LINE L2 -17 3358 3287 5 1185 270 0 0 0 chr15 78759830 78759860 -24735114 + (CCA)n Simple_repeat Simple_repeat 3 32 0 5 1185 233 294 126 81 chr15 78760893 78761004 -24733970 + B1F1 SINE Alu 3 118 -31 5 1185 257 280 55 18 chr15 78761111 78761220 -24733754 + MIR SINE MIR 80 192 -70 5 1185 743 163 250 57 chr15 78762314 78762490 -24732484 + B3 SINE B2 1 210 -6 5 1185 1166 75 7 0 chr15 78762518 78762665 -24732309 + B1_Mus1 SINE Alu 1 148 0 5 1185 627 176 83 15 chr15 78762714 78762847 -24732127 + B1_Mur2 SINE Alu 7 148 -1 5 1185 1393 82 27 0 chr15 78762894 78763051 -24731923 + B2_Mm2 SINE B2 5 161 -34 5 1185 189 0 0 0 chr15 78763051 78763072 -24731902 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 5 1185 1393 82 27 0 chr15 78763072 78763098 -24731876 + B2_Mm2 SINE B2 162 192 -3 5 1185 555 206 103 0 chr15 78763454 78763580 -24731394 - ID_B1 SINE B4 -5 219 81 5 1185 1306 98 38 0 chr15 78763592 78763776 -24731198 - B2_Mm2 SINE B2 -4 191 1 5 1185 678 97 43 17 chr15 78764051 78764166 -24730808 - B1_Mus2 SINE Alu -1 146 29 5 1185 264 355 33 8 chr15 78764218 78764340 -24730634 + MER5A DNA MER1_type 5 129 -60 5 1185 588 216 0 86 chr15 78764454 78764559 -24730415 + B3 SINE B2 1 93 -123 5 1185 1459 40 17 0 chr15 78764559 78764734 -24730240 - B2_Mm1a SINE B2 -15 178 1 5 1185 588 264 2 74 chr15 78764734 78764824 -24730150 + B3 SINE B2 94 185 -13 5 1185 556 216 84 63 chr15 78764839 78764982 -24729992 - B1_Mur2 SINE Alu -2 147 2 5 1185 303 139 10 157 chr15 78765925 78766027 -24728947 + URR1B DNA MER1_type 65 151 -74 5 1185 316 314 0 110 chr15 78766032 78766168 -24728806 + PB1 SINE Alu 7 127 0 5 1185 249 244 68 68 chr15 78766701 78766789 -24728185 + MIRm SINE MIR 79 166 -110 5 1185 671 231 341 11 chr15 78767261 78767537 -24727437 - MTE2b LTR MaLR -1 378 12 5 1185 337 318 0 0 chr15 78768801 78768908 -24726066 - MER2 DNA MER2_type -55 290 184 5 1185 1076 116 7 0 chr15 78768917 78769064 -24725910 + B1_Mus1 SINE Alu 1 148 0 5 1185 486 0 0 0 chr15 78769208 78769262 -24725712 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1185 720 250 76 10 chr15 78769332 78769530 -24725444 + B3 SINE B2 1 211 -5 5 1185 380 275 19 90 chr15 78769639 78769795 -24725179 + ID_B1 SINE B4 32 176 -48 5 1185 376 169 28 0 chr15 78769740 78769811 -24725163 + PB1D10 SINE Alu 40 112 -5 5 1185 1138 262 164 27 chr15 78769995 78770360 -24724614 - MTD LTR MaLR 0 419 5 5 1185 322 231 83 46 chr15 78771485 78771594 -24723380 + ID_B1 SINE B4 91 203 -21 5 1185 220 267 45 98 chr15 78772216 78772253 -24722721 + B1F1 SINE Alu 8 44 -105 5 1185 560 49 0 0 chr15 78772253 78772334 -24722640 + L1Md_F3 LINE L1 6492 6572 -12 5 1185 220 267 45 98 chr15 78772334 78772408 -24722566 + B1F1 SINE Alu 45 113 -36 5 1185 316 313 8 25 chr15 78772430 78772548 -24722426 + PB1D10 SINE Alu 2 117 0 5 1185 387 337 0 0 chr15 78772665 78772760 -24722214 - MLT1J LTR MaLR -203 309 215 5 1185 1169 62 7 0 chr15 78772812 78772958 -24722016 + B1_Mus1 SINE Alu 2 148 0 5 1186 272 221 63 25 chr15 78774319 78774351 -24720623 + B4 SINE B4 1 34 -258 5 1186 1390 209 36 117 chr15 78774351 78774763 -24720211 - MTE2a LTR MaLR 0 379 1 5 1186 331 226 32 48 chr15 78774763 78774853 -24720121 + RSINE1 SINE B4 35 121 -44 5 1186 282 29 0 0 chr15 78774870 78774905 -24720069 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 5 1186 1171 30 0 0 chr15 78774905 78775038 -24719936 - B1_Mus2 SINE Alu -13 134 2 5 1186 386 129 0 28 chr15 78775045 78775075 -24719899 + polypyrimidine Low_complexity Low_complexity 43 72 0 5 1186 1023 156 0 0 chr15 78775075 78775254 -24719720 + CT-rich Low_complexity Low_complexity 2 180 0 5 1186 386 129 0 28 chr15 78775254 78775295 -24719679 + polypyrimidine Low_complexity Low_complexity 3 42 0 5 1186 402 21 0 0 chr15 78775296 78775343 -24719631 + (TTA)n Simple_repeat Simple_repeat 3 49 0 5 1186 969 143 7 0 chr15 78775364 78775504 -24719470 - B1_Mur3 SINE Alu -7 142 2 5 1186 735 256 35 0 chr15 78775504 78775676 -24719298 - B3 SINE B2 -37 179 2 5 1186 931 56 8 0 chr15 78775712 78775837 -24719137 + B1_Mus2 SINE Alu 22 147 0 5 1186 583 94 0 20 chr15 78775852 78775950 -24719024 + (GAAAA)n Simple_repeat Simple_repeat 2 97 0 5 1186 348 305 88 44 chr15 78776138 78776320 -24718654 + RMER15 LTR ERVL 321 510 -65 5 1186 322 247 23 23 chr15 78777151 78777238 -24717736 - MIRb SINE MIR -141 127 41 5 1186 309 303 37 0 chr15 78777418 78777527 -24717447 + MIRb SINE MIR 34 146 -122 5 1186 342 266 35 115 chr15 78777800 78777974 -24717000 - ID_B1 SINE B4 0 224 65 5 1186 219 114 0 0 chr15 78778780 78778815 -24716159 + (TCCA)n Simple_repeat Simple_repeat 4 38 0 5 1186 268 284 45 18 chr15 78779197 78779308 -24715666 + BC1_Mm scRNA scRNA 3 116 -36 5 1186 482 275 241 5 chr15 78779733 78779945 -24715029 - B4A SINE B4 -3 289 28 5 1186 440 198 0 30 chr15 78780093 78780192 -24714782 - B1_Mur3 SINE Alu 0 149 54 5 1186 201 175 0 0 chr15 78780215 78780255 -24714719 + CT-rich Low_complexity Low_complexity 2 41 0 5 1186 1272 101 11 43 chr15 78780351 78780538 -24714436 + B2_Mm1t SINE B2 1 181 -12 5 1186 243 0 0 0 chr15 78780616 78780643 -24714331 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 5 1186 1225 68 0 0 chr15 78780647 78780795 -24714179 + B1_Mus1 SINE Alu 1 148 0 5 1186 1302 75 98 0 chr15 78780825 78780840 -24714134 - B2_Mm2 SINE B2 -3 192 178 6 1186 279 0 0 0 chr15 78780840 78780871 -24714103 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 6 1186 1302 75 98 0 chr15 78780871 78781029 -24713945 - B2_Mm2 SINE B2 -18 177 3 6 1186 821 82 0 8 chr15 78781038 78781161 -24713813 + B2_Mm2 SINE B2 60 181 -14 6 1186 454 170 2 3 chr15 78781645 78781730 -24713244 - B1_Mur2 SINE Alu -21 126 43 6 1186 651 254 14 29 chr15 78781746 78781884 -24713090 - B1_Mur2 SINE Alu -13 136 1 6 1186 1046 136 0 20 chr15 78781885 78782035 -24712939 - B1_Mus1 SINE Alu 0 148 2 6 1186 25 31 0 0 chr15 78782046 78782078 -24712896 + AT_rich Low_complexity Low_complexity 1 32 0 6 1186 721 232 46 0 chr15 78782083 78782234 -24712740 - RSINE1 SINE B4 -5 160 3 6 1186 742 210 0 14 chr15 78782294 78782434 -24712540 - B1_Mur1 SINE Alu 0 149 12 6 1186 606 235 29 0 chr15 78782527 78782663 -24712311 + B1F SINE Alu 2 141 -8 6 1186 504 0 0 0 chr15 78783664 78783720 -24711254 + (GAGAA)n Simple_repeat Simple_repeat 1 56 0 6 1186 256 348 80 42 chr15 78783866 78784079 -24710895 - L2 LINE L2 -510 2909 2689 6 1186 449 219 52 0 chr15 78784404 78784500 -24710474 + RSINE1 SINE B4 2 102 -63 6 1186 387 0 0 0 chr15 78784500 78784543 -24710431 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 1186 726 284 30 15 chr15 78784610 78784807 -24710167 + B3 SINE B2 13 212 -4 6 1186 25 0 0 0 chr15 78785140 78785165 -24709809 + AT_rich Low_complexity Low_complexity 1 25 0 6 1186 718 196 43 14 chr15 78785170 78785310 -24709664 + B1_Mur1 SINE Alu 1 144 -5 6 1186 1036 134 0 20 chr15 78785314 78785466 -24709508 + B1_Mur4 SINE Alu 2 150 0 6 1186 824 161 0 0 chr15 78785773 78785903 -24709071 + B3 SINE B2 1 130 -86 6 1186 345 207 0 0 chr15 78785958 78786040 -24708934 + (TA)n Simple_repeat Simple_repeat 1 82 0 6 1186 1014 147 49 0 chr15 78786159 78786343 -24708631 + B2_Mm2 SINE B2 3 195 0 6 1186 452 206 102 10 chr15 78786529 78786627 -24708347 - PB1D10 SINE Alu -10 107 1 6 1186 196 28 26 53 chr15 78786642 78786680 -24708294 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 6 1186 1183 42 42 0 chr15 78786680 78786822 -24708152 - B1_Mus1 SINE Alu 0 148 1 6 1186 261 321 70 53 chr15 78786827 78786998 -24707976 - MIR SINE MIR -2 260 87 6 1186 421 258 72 0 chr15 78789132 78789229 -24705745 + PB1D10 SINE Alu 2 105 -12 6 1186 346 360 7 14 chr15 78789349 78789487 -24705487 + MIR3 SINE MIR 20 156 -52 6 1186 291 345 97 0 chr15 78791064 78791177 -24703797 - MIR SINE MIR -90 172 49 6 1186 22 35 0 0 chr15 78791608 78791637 -24703337 + AT_rich Low_complexity Low_complexity 1 29 0 6 1186 499 148 23 0 chr15 78791656 78791744 -24703230 - B3 SINE B2 -124 92 3 6 1186 393 81 0 0 chr15 78791760 78791822 -24703152 + (TTTC)n Simple_repeat Simple_repeat 3 64 0 6 1186 984 122 0 33 chr15 78791822 78791975 -24702999 - B1_Mur3 SINE Alu 0 149 2 6 1186 405 295 23 9 chr15 78793320 78793446 -24701528 - ID_B1 SINE B4 -33 191 69 6 1186 229 263 46 92 chr15 78794078 78794208 -24700766 + Charlie6 DNA MER1_type 2063 2186 -1314 6 1186 217 132 0 0 chr15 78794370 78794408 -24700566 + (CCCCAG)n Simple_repeat Simple_repeat 5 42 0 6 1186 346 298 32 32 chr15 78794492 78794617 -24700357 - B1F1 SINE Alu -2 147 23 6 1186 1012 97 86 64 chr15 78794637 78794662 -24700312 - B2_Mm2 SINE B2 -3 192 173 6 1186 1628 52 0 0 chr15 78794662 78794855 -24700119 - B2_Mm1a SINE B2 0 193 1 6 1186 1012 97 86 64 chr15 78794855 78795016 -24699958 - B2_Mm2 SINE B2 -23 172 2 6 1186 353 233 190 0 chr15 78795590 78795706 -24699268 - MTEa LTR MaLR -33 346 209 6 1186 1219 171 13 18 chr15 78795713 78795939 -24699035 - URR1B DNA MER1_type 0 225 1 6 1186 605 228 136 29 chr15 78796038 78796178 -24698796 - RSINE1 SINE B4 -8 157 3 6 1186 488 337 64 0 chr15 78796181 78796353 -24698621 - MTEa LTR MaLR -196 183 1 6 1186 244 265 98 39 chr15 78799028 78799130 -24695844 + MIRc SINE MIR 4 111 -157 6 1186 281 299 26 15 chr15 78799184 78799336 -24695638 + MIRm SINE MIR 36 182 -80 6 1186 283 221 44 0 chr15 78799476 78799544 -24695430 + ID4_ SINE ID 1 71 -12 6 1186 1140 64 0 0 chr15 78799969 78800110 -24694864 - B1_Mus1 SINE Alu -5 143 3 6 1186 258 232 0 18 chr15 78800320 78800377 -24694597 - ID_B1 SINE B4 -9 215 160 6 1186 525 220 28 0 chr15 78800475 78800584 -24694390 - PB1D7 SINE Alu -8 112 1 6 1186 187 318 32 0 chr15 78800794 78800857 -24694117 - L2a LINE L2 0 3426 3362 6 1186 198 0 0 0 chr15 78800997 78801019 -24693955 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 6 1186 410 204 51 0 chr15 78801019 78801117 -24693857 - B1F2 SINE Alu -27 122 20 6 1186 297 259 137 66 chr15 78801036 78801218 -24693756 - MT2B LTR ERVL -343 258 64 6 1186 288 0 0 0 chr15 78801254 78801286 -24693688 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1186 217 163 82 0 chr15 78801650 78801699 -24693275 - PB1D9 SINE Alu 0 120 68 6 1186 446 300 23 0 chr15 78801659 78801789 -24693185 - ID_B1 SINE B4 -9 215 83 6 1186 185 286 0 0 chr15 78802567 78802609 -24692365 + L2c LINE L2 3334 3375 -12 6 1186 211 171 23 0 chr15 78802622 78802666 -24692308 + L2a LINE L2 3321 3407 -19 6 1186 244 298 71 12 chr15 78802772 78802857 -24692117 - MIR SINE MIR -69 193 104 6 1186 274 269 190 7 chr15 78804877 78805019 -24689955 - MIRb SINE MIR -99 169 2 6 1186 306 0 0 0 chr15 78805437 78805471 -24689503 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1186 396 259 0 0 chr15 78805937 78806018 -24688956 + ID4 SINE ID 3 83 0 6 1186 207 230 0 47 chr15 78806351 78806415 -24688559 + (TGGG)n Simple_repeat Simple_repeat 2 62 0 6 1186 210 143 0 0 chr15 78806616 78806651 -24688323 + (TTCC)n Simple_repeat Simple_repeat 2 36 0 6 1186 567 139 390 19 chr15 78806718 78806872 -24688102 - B3 SINE B2 -5 211 1 6 1186 324 0 0 0 chr15 78808023 78808059 -24686915 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 6 1186 186 309 10 60 chr15 78808260 78808360 -24686614 + MIR SINE MIR 38 132 -76 6 1186 303 288 0 0 chr15 78808627 78808693 -24686281 - ID_B1 SINE B4 -18 206 141 6 1186 223 282 0 49 chr15 78809203 78809285 -24685689 + G-rich Low_complexity Low_complexity 5 82 0 6 1186 244 333 48 0 chr15 78809891 78809975 -24684999 - MLT1G1 LTR MaLR -388 191 104 6 1186 218 274 97 38 chr15 78810652 78810797 -24684177 + MIRb SINE MIR 38 195 -73 6 1186 230 315 82 0 chr15 78810925 78810998 -24683976 - BC1_Mm scRNA scRNA -66 86 8 6 1186 1347 82 0 0 chr15 78811193 78811489 -24683485 + (TG)n Simple_repeat Simple_repeat 1 296 0 6 1186 1123 101 0 0 chr15 78811625 78811773 -24683201 + B1_Mus1 SINE Alu 1 148 0 6 1186 229 246 49 0 chr15 78812142 78812203 -24682771 + MIRm SINE MIR 109 172 -104 6 1186 436 206 0 101 chr15 78812231 78812350 -24682624 - PB1D10 SINE Alu -1 116 10 6 1186 390 233 48 0 chr15 78812352 78812455 -24682519 - B1F SINE Alu -1 148 41 6 1186 212 244 0 53 chr15 78813314 78813409 -24681565 + C-rich Low_complexity Low_complexity 5 94 0 6 1186 197 333 0 0 chr15 78814113 78814161 -24680813 - MIRc SINE MIR -109 159 112 6 1186 282 29 0 0 chr15 78814439 78814474 -24680500 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1186 318 26 0 0 chr15 78814526 78814565 -24680409 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1186 234 0 0 0 chr15 78815335 78815361 -24679613 + (TC)n Simple_repeat Simple_repeat 1 26 0 6 1186 267 189 0 0 chr15 78815361 78815414 -24679560 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1186 635 354 40 5 chr15 78816280 78816504 -24678470 - B4A SINE B4 -59 233 2 6 1186 279 302 42 0 chr15 78819307 78819403 -24675571 - MIR3 SINE MIR -3 205 106 6 1186 1187 44 0 0 chr15 78819613 78819749 -24675225 + B1_Mus1 SINE Alu 2 137 -11 6 1186 599 241 21 28 chr15 78820547 78820692 -24674282 + ID_B1 SINE B4 14 157 -67 6 1186 349 258 32 62 chr15 78820703 78820854 -24674120 + RSINE1 SINE B4 19 164 -1 6 1186 258 32 0 0 chr15 78820869 78820900 -24674074 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1186 317 215 15 0 chr15 78820970 78821035 -24673939 + ID_B1 SINE B4 153 218 -6 6 1186 231 354 40 0 chr15 78822514 78822613 -24672361 - MLT1J LTR MaLR -337 175 73 6 1186 216 0 0 0 chr15 78822748 78822772 -24672202 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 1186 977 201 106 0 chr15 78822785 78822964 -24672010 - B3 SINE B2 -15 201 4 6 1186 628 311 44 22 chr15 78824641 78824868 -24670106 - MIRb SINE MIR -6 262 31 6 1186 276 273 15 0 chr15 78825107 78825173 -24669801 + MER20 DNA MER1_type 16 82 -137 6 1186 486 298 131 50 chr15 78825173 78825683 -24669291 - MER63C DNA AcHobo -24 906 338 6 1186 634 275 142 51 chr15 78825837 78826148 -24668826 - MTE2b LTR MaLR 0 379 41 6 1186 287 290 14 0 chr15 78826149 78826218 -24668756 - MTE2b LTR MaLR -301 78 9 6 1186 1188 68 7 0 chr15 78827508 78827654 -24667320 - B1_Mus1 SINE Alu 0 148 2 6 1186 656 93 76 106 chr15 78827717 78827849 -24667125 + B1_Mur2 SINE Alu 21 148 -1 6 1186 30 0 0 0 chr15 78827853 78827883 -24667091 + AT_rich Low_complexity Low_complexity 1 30 0 6 1186 633 118 20 136 chr15 78827906 78828053 -24666921 - B1_Mur4 SINE Alu -2 148 19 6 1186 295 252 80 80 chr15 78828047 78828159 -24666815 + PB1D10 SINE Alu 6 117 0 6 1186 227 237 32 48 chr15 78828169 78828231 -24666743 + ID SINE ID 2 62 -162 6 1186 214 246 151 55 chr15 78828231 78828242 -24666732 + ID4 SINE ID 2 81 -2 6 1186 537 246 154 0 chr15 78828277 78828407 -24666567 + RSINE1 SINE B4 3 152 -13 7 1186 429 148 67 11 chr15 78829222 78829311 -24665663 + PB1D10 SINE Alu 19 112 -5 7 1186 585 161 263 0 chr15 78829319 78829437 -24665537 + B1_Mur4 SINE Alu 2 150 0 7 1186 180 0 0 0 chr15 78829437 78829457 -24665517 + (CAAT)n Simple_repeat Simple_repeat 1 20 0 7 1186 377 323 37 30 chr15 78829811 78829945 -24665029 - RSINE1 SINE B4 -6 159 25 7 1186 382 289 30 30 chr15 78830807 78830939 -24664035 - MIRb SINE MIR -131 137 6 7 1186 690 186 20 46 chr15 78833078 78833230 -24661744 + B1_Mur2 SINE Alu 2 149 0 7 1186 1241 113 101 19 chr15 78833353 78833560 -24661414 - URR1A DNA MER1_type 0 226 3 7 1186 272 289 106 45 chr15 78833591 78833770 -24661204 - MIR SINE MIR -45 217 29 7 1186 495 0 0 0 chr15 78835376 78835431 -24659543 + (ATATG)n Simple_repeat Simple_repeat 3 57 0 7 1186 617 134 9 0 chr15 78835742 78835854 -24659120 + (CA)n Simple_repeat Simple_repeat 1 113 0 7 1186 1197 54 0 20 chr15 78836689 78836839 -24658135 + B1_Mus1 SINE Alu 2 148 0 7 1186 247 247 35 47 chr15 78837202 78837287 -24657687 + MLT1L LTR MaLR 157 240 -370 7 1186 259 305 162 62 chr15 78837334 78837576 -24657398 + L1ME3 LINE L1 5488 5768 -405 7 1186 779 287 10 15 chr15 78837576 78837781 -24657193 + ID_B1 SINE B4 3 206 -18 7 1186 324 320 113 44 chr15 78837781 78838149 -24656825 + L1ME3 LINE L1 5769 6162 -2 7 1186 885 176 150 0 chr15 78838151 78838338 -24656636 - B3 SINE B2 0 216 2 7 1186 1278 98 60 5 chr15 78838367 78838551 -24656423 + B2_Mm2 SINE B2 2 195 0 7 1186 1211 48 0 7 chr15 78838551 78838697 -24656277 + B1_Mm SINE Alu 1 146 -1 7 1186 251 140 20 0 chr15 78838697 78838747 -24656227 + GA-rich Low_complexity Low_complexity 1 51 0 7 1186 234 338 92 66 chr15 78839135 78839363 -24655611 - MLT1F1 LTR MaLR -269 300 67 7 1186 1474 126 13 5 chr15 78839629 78839853 -24655121 + URR1A DNA MER1_type 1 226 0 7 1186 242 273 75 38 chr15 78840767 78840847 -24654127 + LTR90A LTR LTR 5 87 -889 7 1186 772 155 56 0 chr15 78841085 78841227 -24653747 - B1_Mur4 SINE Alu 0 150 1 7 1186 348 241 32 65 chr15 78841227 78841254 -24653720 - MT2B LTR ERVL -441 160 138 7 1186 3786 14 121 0 chr15 78841278 78841718 -24653256 - MT2_Mm LTR ERVL 0 493 1 7 1186 300 320 26 52 chr15 78841834 78842024 -24652950 + MIRb SINE MIR 12 202 -66 7 1186 447 255 46 66 chr15 78842617 78842768 -24652206 - B3A SINE B2 -50 148 1 7 1186 999 123 0 0 chr15 78842828 78843041 -24651933 + (TG)n Simple_repeat Simple_repeat 1 213 0 7 1186 1243 54 0 0 chr15 78843151 78843298 -24651676 - B1_Mus1 SINE Alu 0 148 2 7 1186 297 0 0 0 chr15 78844642 78844675 -24650299 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1186 182 384 71 0 chr15 78844856 78844955 -24650019 - L2c LINE L2 -184 3203 3098 7 1186 215 356 59 39 chr15 78845455 78845649 -24649325 - MIRb SINE MIR -18 250 52 7 1186 1244 54 0 0 chr15 78845747 78845895 -24649079 - B1_Mus1 SINE Alu 0 148 1 7 1186 763 167 64 14 chr15 78846286 78846426 -24648548 - B1_Mus1 SINE Alu 0 148 2 7 1186 1163 57 0 0 chr15 78846473 78846613 -24648361 + B1_Mm SINE Alu 2 141 -6 7 1186 378 0 0 0 chr15 78846615 78846657 -24648317 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 7 1186 370 223 48 0 chr15 78846678 78846781 -24648193 + RMER1B Other Other 49 156 -910 7 1186 648 316 112 3 chr15 78846977 78847291 -24647683 + RMER1C Other Other 454 801 -541 7 1186 1500 221 53 38 chr15 78847324 78847783 -24647191 + RMER1B Other Other 600 1340 -2 7 1186 369 241 44 44 chr15 78847788 78847901 -24647073 - B3 SINE B2 -7 209 97 7 1186 407 357 46 23 chr15 78847910 78848085 -24646889 - MER2 DNA MER2_type -75 270 92 7 1186 243 234 77 15 chr15 78848092 78848157 -24646817 - ID2 SINE ID -13 70 2 7 1186 1074 37 0 0 chr15 78848188 78848323 -24646651 + (TG)n Simple_repeat Simple_repeat 1 135 0 7 1186 501 231 21 0 chr15 78848332 78848456 -24646518 - RSINE1 SINE B4 -7 158 30 7 1186 1518 62 15 15 chr15 78848503 78848698 -24646276 - B2_Mm2 SINE B2 0 195 1 7 1186 810 253 54 5 chr15 78848732 78848954 -24646020 + Lx8 LINE L1 7041 7273 -200 7 1186 796 201 207 0 chr15 78849148 78849327 -24645647 + B3 SINE B2 1 216 0 7 1186 200 35 35 0 chr15 78849353 78849382 -24645592 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 7 1186 261 233 83 0 chr15 78849382 78849442 -24645532 - PB1D10 SINE Alu -13 104 40 7 1186 680 111 9 0 chr15 78850759 78850867 -24644107 + (TC)n Simple_repeat Simple_repeat 1 109 0 7 1186 723 79 8 34 chr15 78850887 78851005 -24643969 - B1_Mus2 SINE Alu 0 147 33 7 1186 398 306 80 37 chr15 78851033 78851196 -24643778 - MLT1D LTR MaLR -46 459 290 7 1186 710 174 53 0 chr15 78851288 78851420 -24643554 - B1_Mur2 SINE Alu -10 139 1 7 1186 24 0 0 0 chr15 78851443 78851467 -24643507 + GC_rich Low_complexity Low_complexity 1 24 0 7 1186 1241 99 16 27 chr15 78851687 78851873 -24643101 - B2_Mm1t SINE B2 -9 184 1 7 1186 261 0 0 0 chr15 78852024 78852053 -24642921 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 1186 435 95 0 0 chr15 78852053 78852127 -24642847 + (GA)n Simple_repeat Simple_repeat 1 74 0 7 1186 234 91 0 0 chr15 78852263 78852296 -24642678 + (T)n Simple_repeat Simple_repeat 1 33 0 7 1186 1114 102 0 0 chr15 78852296 78852443 -24642531 - B1_Mus2 SINE Alu 0 147 1 7 1186 770 210 160 11 chr15 78852647 78852835 -24642139 - B3 SINE B2 0 216 1 7 1186 188 158 26 0 chr15 78853051 78853089 -24641885 + MIR SINE MIR 78 116 -92 7 1186 285 29 0 0 chr15 78853868 78853902 -24641072 + (CCCCCA)n Simple_repeat Simple_repeat 3 36 0 7 1186 291 355 29 23 chr15 78854438 78854611 -24640363 + L2a LINE L2 2969 3142 -284 7 1186 981 137 27 0 chr15 78854629 78854775 -24640199 + B1_Mur4 SINE Alu 1 150 0 7 1186 1200 54 0 20 chr15 78854798 78854949 -24640025 - B1_Mus1 SINE Alu 0 148 1 7 1186 359 326 65 52 chr15 78854964 78855119 -24639855 - RSINE1 SINE B4 -6 159 3 7 1186 847 174 87 27 chr15 78855132 78855315 -24639659 - B3A SINE B2 0 198 5 7 1186 1129 188 29 14 chr15 78855348 78855558 -24639416 - B3 SINE B2 -3 213 1 7 1186 560 200 55 0 chr15 78855644 78855754 -24639220 - PB1D7 SINE Alu 0 120 5 7 1186 205 238 0 0 chr15 78856476 78856518 -24638456 + C-rich Low_complexity Low_complexity 1 42 0 7 1186 31 0 0 0 chr15 78858625 78858656 -24636318 + GC_rich Low_complexity Low_complexity 1 31 0 7 1186 756 174 64 14 chr15 78861973 78862113 -24632861 - B1_Mur3 SINE Alu -2 147 1 7 1186 232 104 62 0 chr15 78862151 78862199 -24632775 + B1_Mm SINE Alu 97 147 0 7 1186 1610 37 5 0 chr15 78862316 78862504 -24632470 - B2_Mm1a SINE B2 -2 191 3 7 1186 439 197 0 0 chr15 78862675 78862746 -24632228 + ID4 SINE ID 3 73 -10 7 1186 840 156 247 6 chr15 78862801 78862975 -24631999 - B3 SINE B2 0 216 1 7 1186 186 167 0 0 chr15 78863407 78863443 -24631531 + CT-rich Low_complexity Low_complexity 1 36 0 7 1186 344 169 0 84 chr15 78863479 78863527 -24631447 - B1_Mur3 SINE Alu -84 65 21 7 1186 3492 18 5 15 chr15 78863527 78863927 -24631047 - MTA_Mm LTR MaLR 0 396 1 7 1186 344 169 0 84 chr15 78863927 78863949 -24631025 - B1_Mur3 SINE Alu -129 20 1 7 1186 856 139 0 18 chr15 78863949 78864118 -24630856 + CT-rich Low_complexity Low_complexity 3 168 0 7 1186 658 132 0 0 chr15 78864120 78864226 -24630748 - B1_Mur3 SINE Alu -2 147 42 7 1186 228 273 42 68 chr15 78864162 78864280 -24630694 - RLTR25B LTR ERVK -526 502 388 7 1186 393 211 0 0 chr15 78864239 78864315 -24630659 - PB1D9 SINE Alu -43 77 2 7 1186 253 346 0 25 chr15 78864246 78864326 -24630648 - B4A SINE B4 -137 155 78 7 1186 791 169 0 98 chr15 78864799 78864963 -24630011 - B1_Mur3 SINE Alu 0 149 2 7 1186 362 289 62 58 chr15 78869001 78869225 -24625749 - RMER17C LTR ERVK -68 342 118 7 1186 326 312 127 6 chr15 78871717 78871875 -24623099 + MIR3 SINE MIR 29 205 -3 7 1186 369 0 0 0 chr15 78872130 78872171 -24622803 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1186 204 125 0 0 chr15 78873716 78873748 -24621226 + (CCA)n Simple_repeat Simple_repeat 2 33 0 7 1186 325 308 28 18 chr15 78874226 78874241 -24620733 - B1F SINE Alu -12 137 28 7 1186 458 204 0 11 chr15 78874241 78874335 -24620639 - ID_B1 SINE B4 -23 201 109 7 1186 222 364 152 0 chr15 78874381 78874499 -24620475 - MIRb SINE MIR -20 248 113 7 1186 1272 59 18 177 chr15 78874543 78874727 -24620247 - B2_Mm1t SINE B2 -3 190 35 7 1186 1215 55 7 0 chr15 78874727 78874872 -24620102 - B1_Mus1 SINE Alu -1 147 2 7 1186 1272 59 18 177 chr15 78874872 78874913 -24620061 - B2_Mm1t SINE B2 -159 34 1 7 1186 405 232 0 0 chr15 78874993 78875075 -24619899 - ID4 SINE ID 0 83 2 7 1186 424 297 157 19 chr15 78875872 78876191 -24618783 + L1MB8 LINE L1 5701 6063 -115 7 1186 338 197 0 0 chr15 78876347 78876408 -24618566 + ID_B1 SINE B4 97 157 -67 7 1186 474 255 38 0 chr15 78876413 78876519 -24618455 + B1F2 SINE Alu 3 112 -37 7 1186 205 27 53 26 chr15 78876523 78876561 -24618413 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 7 1186 1087 97 14 0 chr15 78876568 78876713 -24618261 + B1_Mm SINE Alu 1 147 0 7 1186 339 225 58 75 chr15 78876713 78876791 -24618183 + L1MEe LINE L1 705 786 -4068 7 1186 1639 37 0 0 chr15 78876791 78876982 -24617992 + B2_Mm1a SINE B2 2 192 -1 8 1186 339 225 58 75 chr15 78876982 78877015 -24617959 + L1MEe LINE L1 787 815 -4039 7 1186 403 264 101 0 chr15 78877593 78877722 -24617252 + B1F1 SINE Alu 1 142 -7 8 1186 650 188 8 0 chr15 78877734 78877840 -24617134 + B1_Mur4 SINE Alu 3 109 -41 8 1186 353 274 3 12 chr15 78877840 78877946 -24617028 + ID4_ SINE ID 4 109 -43 8 1186 207 0 0 0 chr15 78878018 78878041 -24616933 + (TG)n Simple_repeat Simple_repeat 1 23 0 8 1186 449 186 82 0 chr15 78878162 78878259 -24616715 - PB1D9 SINE Alu 0 120 16 8 1186 347 299 48 30 chr15 78878184 78878345 -24616629 - ID_B1 SINE B4 -48 176 12 8 1186 580 261 49 0 chr15 78878345 78878487 -24616487 - B1F1 SINE Alu 0 149 1 8 1186 1243 124 11 0 chr15 78879102 78879279 -24615695 - B2_Mm1t SINE B2 -14 179 1 8 1186 496 179 63 0 chr15 78879313 78879408 -24615566 - PB1D9 SINE Alu -5 115 15 8 1186 239 333 44 11 chr15 78879334 78879425 -24615549 - B4 SINE B4 -118 174 81 8 1186 1561 48 21 0 chr15 78879425 78879613 -24615361 - B2_Mm1a SINE B2 0 193 2 8 1186 222 318 192 29 chr15 78881428 78881610 -24613364 + MIRb SINE MIR 57 261 -7 8 1186 1013 37 50 43 chr15 78882652 78882793 -24612181 - B1_Mus1 SINE Alu -2 146 5 8 1186 372 308 94 0 chr15 78883510 78883669 -24611305 - MLT1D LTR MaLR -26 479 306 8 1186 303 360 72 0 chr15 78883708 78883861 -24611113 - MLT1D LTR MaLR -309 196 33 8 1186 2123 178 139 33 chr15 78885101 78885493 -24609481 + RLTR20A LTR ERVK 9 442 -99 8 1186 215 61 0 29 chr15 78885493 78885527 -24609447 + (TG)n Simple_repeat Simple_repeat 2 34 0 8 1186 2123 178 139 33 chr15 78885527 78885616 -24609358 + RLTR20A LTR ERVK 443 540 -1 8 1186 201 361 52 0 chr15 78886106 78886203 -24608771 - MIR3 SINE MIR -48 160 59 8 1186 304 234 163 41 chr15 78887303 78887450 -24607524 + L1M5 LINE L1 4966 5130 -1016 8 1186 441 272 9 17 chr15 78887465 78887581 -24607393 + PB1D10 SINE Alu 1 115 -2 8 1186 979 137 14 0 chr15 78887585 78887731 -24607243 + B1_Mus1 SINE Alu 1 148 0 8 1186 1107 111 6 0 chr15 78887734 78887896 -24607078 + B2_Mm1t SINE B2 1 163 -30 8 1186 216 0 0 0 chr15 78887896 78887920 -24607054 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 8 1186 288 152 7 13 chr15 78887989 78888094 -24606880 + B2_Mm2 SINE B2 47 194 -1 8 1186 974 149 31 114 chr15 78888126 78888353 -24606621 + ORR1A4 LTR MaLR 1 208 -121 8 1186 742 68 246 0 chr15 78888694 78888812 -24606162 - B1_Mus1 SINE Alu 0 148 2 8 1186 278 306 0 0 chr15 78889935 78890007 -24604967 + RSINE1 SINE B4 77 148 -17 8 1186 467 324 31 59 chr15 78890289 78890578 -24604396 - B4A SINE B4 -10 282 2 8 1186 350 298 70 0 chr15 78890594 78890708 -24604266 - B1_Mur1 SINE Alu -21 128 7 8 1186 650 95 65 0 chr15 78891019 78891130 -24603844 + B1_Mus2 SINE Alu 17 136 -13 8 1186 311 0 26 0 chr15 78891132 78891171 -24603803 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 8 1186 299 45 0 43 chr15 78891667 78891713 -24603261 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 8 1186 253 309 33 43 chr15 78891817 78891991 -24602983 + MIRm SINE MIR 15 193 -75 8 1186 1142 48 0 0 chr15 78892361 78892506 -24602468 + B1_Mus1 SINE Alu 2 146 -2 8 1186 297 0 0 0 chr15 78893720 78893753 -24601221 + (A)n Simple_repeat Simple_repeat 1 33 0 8 1186 490 198 19 19 chr15 78894192 78894295 -24600679 - B1_Mus2 SINE Alu -19 128 26 8 1186 359 113 16 0 chr15 78894297 78894359 -24600615 + (TGGA)n Simple_repeat Simple_repeat 3 65 0 8 1186 261 0 0 0 chr15 78894394 78894423 -24600551 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 8 1186 512 217 9 0 chr15 78894423 78894521 -24600453 - B1_Mur4 SINE Alu -9 141 43 8 1186 227 211 17 50 chr15 78894470 78894530 -24600444 - 4.5SRNA scRNA scRNA -8 86 29 8 1186 998 117 0 7 chr15 78894545 78894691 -24600283 - B1_Mus2 SINE Alu -1 146 2 8 1186 386 239 34 0 chr15 78894702 78894819 -24600155 - Lx7 LINE L1 0 7696 7576 8 1186 207 0 0 0 chr15 78894821 78894844 -24600130 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 8 1186 452 287 37 5 chr15 78894848 78895037 -24599937 - Lx7 LINE L1 -281 7415 7221 8 1186 417 186 0 23 chr15 78895039 78895127 -24599847 - Lx7 LINE L1 -612 7084 6999 8 1186 890 143 7 13 chr15 78895135 78895284 -24599690 - B1_Mus1 SINE Alu 0 148 1 8 1186 266 279 70 28 chr15 78895286 78895500 -24599474 - L1_Mur3 LINE L1 -6638 1074 852 8 1186 565 279 94 84 chr15 78895571 78896008 -24598966 + RMER21B LTR ERV1 1 512 -330 8 1186 1853 141 124 0 chr15 78896008 78896356 -24598618 + ORR1B1 LTR MaLR 3 393 -1 8 1186 565 249 81 84 chr15 78896356 78896403 -24598571 + RMER21B LTR ERV1 513 565 -277 8 1186 1150 191 41 55 chr15 78896483 78896940 -24598034 - RMER17C LTR ERVK -8 402 1 8 1186 1858 128 68 18 chr15 78897198 78897524 -24597450 - ORR1B1 LTR MaLR -13 381 40 8 1186 720 218 189 16 chr15 78897597 78897840 -24597134 + RMER21B LTR ERV1 283 567 -275 8 1186 532 148 151 34 chr15 78898058 78898177 -24596797 + RMER4B LTR ERVK 49 181 -404 8 1186 332 234 99 73 chr15 78898168 78898413 -24596561 + RMER4B LTR ERVK 348 610 -1 8 1186 241 302 141 50 chr15 78898771 78898970 -24596004 - L2 LINE L2 -665 2754 2538 8 1186 1766 217 104 22 chr15 78898970 78899423 -24595551 + RLTR18 LTR ERVK 1 490 -126 8 1186 1222 27 0 0 chr15 78899423 78899570 -24595404 + B1_Mus2 SINE Alu 1 147 0 8 1186 533 253 160 127 chr15 78899570 78899742 -24595232 + RLTR18B LTR ERVK 383 512 0 8 1186 524 162 28 28 chr15 78899840 78899948 -24595026 - B1_Mus2 SINE Alu -27 120 13 8 1186 268 264 14 0 chr15 78899956 78900028 -24594946 - ID4 SINE ID -9 74 2 8 1186 361 326 135 19 chr15 78900032 78900298 -24594676 - L2 LINE L2 -969 2450 2154 8 1186 442 0 35 0 chr15 78900503 78900561 -24594413 + (TC)n Simple_repeat Simple_repeat 2 61 0 8 1186 1615 171 30 83 chr15 78900780 78901176 -24593798 + RMER10B LTR ERVL 1 375 -23 8 1186 222 344 99 43 chr15 78901189 78901350 -24593624 + B3 SINE B2 47 216 0 8 1186 2262 99 82 109 chr15 78901380 78901820 -24593154 - RLTR23 LTR ERV1 0 430 3 8 1186 1482 52 0 10 chr15 78901853 78902048 -24592926 - B2_Mm1a SINE B2 0 193 1 8 1186 800 137 11 32 chr15 78902153 78902299 -24592675 + B2_Mm2 SINE B2 2 155 -61 8 1186 477 245 6 70 chr15 78902397 78902555 -24592419 + B1F1 SINE Alu 1 148 -1 8 1186 262 293 8 108 chr15 78902764 78902894 -24592080 - PB1 SINE Alu -2 125 1 8 1186 822 64 0 0 chr15 78902985 78903094 -24591880 - B2_Mm2 SINE B2 -86 109 1 8 1186 257 308 20 51 chr15 78903108 78903303 -24591671 - Arthur1 DNA Tip100 -395 3552 3364 8 1186 349 299 130 15 chr15 78903406 78903606 -24591368 - Arthur1 DNA Tip100 -3707 240 18 8 1186 1375 83 0 10 chr15 78903606 78903801 -24591173 + B2_Mm2 SINE B2 3 195 0 8 1186 1428 32 26 11 chr15 78903937 78903966 -24591008 - B2_Mm1a SINE B2 0 193 161 8 1186 207 0 0 0 chr15 78903966 78903989 -24590985 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 8 1186 1428 32 26 11 chr15 78903989 78904148 -24590826 - B2_Mm1a SINE B2 -33 160 2 8 1186 696 209 35 21 chr15 78904295 78904437 -24590537 + B1_Mur2 SINE Alu 5 148 -1 8 1186 658 158 8 0 chr15 78904439 78904559 -24590415 + B1_Mur4 SINE Alu 1 121 -29 8 1186 291 342 43 55 chr15 78904444 78904608 -24590366 + B4 SINE B4 90 251 -41 8 1186 441 247 0 0 chr15 78905007 78905104 -24589870 - RSINE1 SINE B4 -59 106 10 8 1186 252 0 0 0 chr15 78905120 78905148 -24589826 + (T)n Simple_repeat Simple_repeat 1 28 0 8 148 293 295 130 8 chr15 78905291 78905414 -24589560 - B1F SINE Alu -2 147 10 8 1187 449 219 138 15 chr15 78906931 78907061 -24587913 - B1_Mur2 SINE Alu -3 146 1 8 1187 290 26 0 25 chr15 78907561 78907601 -24587373 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 1187 755 191 172 16 chr15 78907650 78907842 -24587132 - URR1B DNA MER1_type -3 222 1 8 1187 664 208 20 14 chr15 78908687 78908833 -24586141 - B1_Mus2 SINE Alu 0 147 1 8 1187 390 219 71 31 chr15 78909138 78909265 -24585709 - B1_Mur3 SINE Alu 0 149 18 8 1187 836 202 81 0 chr15 78909610 78909808 -24585166 - B3 SINE B2 0 216 3 8 1187 323 162 78 39 chr15 78910049 78910126 -24584848 - B1_Mur4 SINE Alu 0 150 71 8 1187 1813 205 48 7 chr15 78910224 78910641 -24584333 - RLTR11A2 LTR ERVK -93 434 1 8 1187 853 176 70 58 chr15 78910643 78910884 -24584090 - MYSERV-int LTR ERVK -2 6548 6305 8 1187 279 0 0 0 chr15 78910890 78910921 -24584053 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 1187 965 57 0 0 chr15 78910921 78911045 -24583929 - B1_Mus2 SINE Alu -9 138 15 8 1187 561 207 40 40 chr15 78911045 78911065 -24583909 - ID_B1 SINE B4 -9 215 71 8 1187 1309 218 10 23 chr15 78911065 78911375 -24583599 - MYSERV16_I-int LTR ERVK -505 1821 1516 8 1187 216 296 13 78 chr15 78911568 78911645 -24583329 + B1_Mus2 SINE Alu 36 107 -40 8 1187 256 191 263 25 chr15 78912709 78912723 -24582251 - ID_B1 SINE B4 0 224 82 8 1187 501 140 0 79 chr15 78912723 78912824 -24582150 - B1_Mus1 SINE Alu -55 93 1 8 1187 313 204 10 0 chr15 78913226 78913300 -24581674 + B1_Mur1 SINE Alu 39 144 -5 8 1187 308 240 37 28 chr15 78913340 78913447 -24581527 - PB1D10 SINE Alu 0 117 10 8 1187 294 208 159 35 chr15 78913882 78913980 -24580994 - B1F SINE Alu 0 149 37 8 1187 237 293 76 57 chr15 78913913 78914018 -24580956 - MT2B LTR ERVL -342 259 153 8 1187 1027 127 38 27 chr15 78914128 78914314 -24580660 - B2_Mm2 SINE B2 -6 189 2 8 1187 371 192 153 4 chr15 78915094 78915195 -24579779 - B1_Mm SINE Alu -6 114 2 8 1187 1489 37 0 35 chr15 78915233 78915431 -24579543 - B2_Mm1a SINE B2 -1 192 2 8 1187 1477 32 43 0 chr15 78915436 78915621 -24579353 - B2_Mm1a SINE B2 0 193 1 8 1187 266 257 32 81 chr15 78916334 78916345 -24578629 + PB1D10 SINE Alu 1 11 -106 8 1187 1248 93 33 0 chr15 78916345 78916527 -24578447 + B2_Mm2 SINE B2 1 188 -7 9 1187 266 257 32 81 chr15 78916527 78916638 -24578336 + PB1D10 SINE Alu 12 117 0 8 1187 475 194 36 36 chr15 78916688 78916800 -24578174 - B1_Mur2 SINE Alu 0 149 38 9 1187 717 151 17 0 chr15 78917249 78917368 -24577606 + B1_Mus1 SINE Alu 26 146 -2 9 1187 259 180 164 0 chr15 78917450 78917471 -24577503 - B1_Mur3 SINE Alu 0 149 129 9 1187 495 0 0 0 chr15 78917471 78917526 -24577448 + (TG)n Simple_repeat Simple_repeat 2 56 0 9 1187 259 180 164 0 chr15 78917526 78917565 -24577409 - B1_Mur3 SINE Alu -21 128 80 9 1187 650 132 116 0 chr15 78917579 78917598 -24577376 - B1_Mur4 SINE Alu -4 146 127 9 1187 405 0 0 0 chr15 78917598 78917643 -24577331 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1187 650 132 116 0 chr15 78917643 78917752 -24577222 - B1_Mur4 SINE Alu -24 126 4 9 1187 225 266 62 0 chr15 78917953 78918017 -24576957 - B1F SINE Alu -81 68 1 9 1187 32 0 0 0 chr15 78918037 78918069 -24576905 + AT_rich Low_complexity Low_complexity 1 32 0 9 1187 687 254 229 90 chr15 78918083 78918135 -24576839 - Lx8 LINE L1 -18 7455 7416 9 1187 1520 37 21 0 chr15 78918135 78918323 -24576651 - B2_Mm1a SINE B2 0 193 2 9 1187 687 254 229 90 chr15 78918323 78918815 -24576159 - Lx8 LINE L1 -58 7415 6835 9 1187 593 73 0 0 chr15 78918842 78918924 -24576050 - B1_Mur4 SINE Alu 0 150 69 9 1187 1061 66 0 0 chr15 78919044 78919180 -24575794 + B1_Mus1 SINE Alu 4 139 -9 9 1187 207 0 0 0 chr15 78919180 78919203 -24575771 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 1187 334 232 11 68 chr15 78919421 78919509 -24575465 + BC1_Mm scRNA scRNA 1 83 -69 9 1187 180 0 0 0 chr15 78920926 78920946 -24574028 + (T)n Simple_repeat Simple_repeat 1 20 0 9 1187 1130 55 14 0 chr15 78920946 78921091 -24573883 - B1_Mus2 SINE Alu 0 147 1 9 1187 259 204 0 0 chr15 78921119 78921168 -24573806 - PB1D10 SINE Alu -42 75 27 9 1187 1049 95 0 7 chr15 78921194 78921342 -24573632 - B1_Mm SINE Alu 0 147 1 9 1187 225 0 0 0 chr15 78921663 78921688 -24573286 + (CAGG)n Simple_repeat Simple_repeat 1 25 0 9 1187 279 0 0 0 chr15 78921688 78921719 -24573255 + (TGGA)n Simple_repeat Simple_repeat 3 33 0 9 1187 247 281 47 0 chr15 78921723 78921787 -24573187 - PB1 SINE Alu -51 76 10 9 1187 313 183 0 66 chr15 78921794 78921870 -24573104 - ORR1D1 LTR MaLR 0 374 304 9 1187 294 164 18 0 chr15 78921856 78921911 -24573063 - ORR1D1 LTR MaLR -322 56 1 9 1187 27 0 0 0 chr15 78922272 78922299 -24572675 + AT_rich Low_complexity Low_complexity 1 27 0 9 1187 250 246 30 15 chr15 78922354 78922420 -24572554 - RSINE1 SINE B4 -95 70 4 9 1187 772 160 76 0 chr15 78922448 78922579 -24572395 + B1_Mus2 SINE Alu 1 141 -6 9 1187 272 211 52 13 chr15 78923050 78923127 -24571847 - RSINE1 SINE B4 -2 163 84 9 1187 940 92 30 0 chr15 78925206 78925337 -24569637 + B1_Mus2 SINE Alu 1 135 -12 9 1187 1238 14 0 0 chr15 78925343 78925488 -24569486 - B1_Mus2 SINE Alu -2 145 1 9 1187 221 237 127 38 chr15 78925633 78925712 -24569262 - PB1D10 SINE Alu -9 108 23 9 1187 234 0 0 0 chr15 78925728 78925754 -24569220 + (T)n Simple_repeat Simple_repeat 1 26 0 9 1187 382 195 103 0 chr15 78925763 78925850 -24569124 - B3 SINE B2 -6 210 115 9 1187 262 286 23 45 chr15 78925881 78925969 -24569005 - B1F SINE Alu 0 149 64 9 1187 730 232 0 7 chr15 78927428 78927571 -24567403 + B1_Mus1 SINE Alu 2 143 -5 9 1187 572 254 27 9 chr15 78927798 78927977 -24566997 + B3A SINE B2 1 186 -30 9 1187 414 0 0 0 chr15 78928062 78928108 -24566866 + (TG)n Simple_repeat Simple_repeat 2 47 0 9 1187 336 300 146 7 chr15 78928406 78928557 -24566417 + MIR SINE MIR 45 216 -46 9 1187 237 33 0 0 chr15 78929123 78929153 -24565821 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 1187 938 122 20 13 chr15 78930627 78930776 -24564198 - B1_Mur4 SINE Alu 0 150 1 9 1187 180 0 0 0 chr15 78931201 78931221 -24563753 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 9 1187 222 316 19 78 chr15 78931347 78931450 -24563524 + L2c LINE L2 3211 3307 -80 9 1187 251 221 18 6 chr15 78932410 78932574 -24562400 + CT-rich Low_complexity Low_complexity 2 167 0 9 1187 205 262 0 0 chr15 78932793 78932835 -24562139 + (TAG)n Simple_repeat Simple_repeat 3 44 0 9 1187 297 0 0 0 chr15 78932922 78932955 -24562019 + (TG)n Simple_repeat Simple_repeat 1 33 0 9 1187 674 277 12 6 chr15 78933094 78933254 -24561720 - RSINE1 SINE B4 -2 163 3 9 1187 345 100 0 0 chr15 78933268 78933318 -24561656 + (TCTG)n Simple_repeat Simple_repeat 3 52 0 9 1187 291 266 0 78 chr15 78933321 78933342 -24561632 - B1_Mur2 SINE Alu -26 123 105 9 1187 1147 83 0 22 chr15 78933342 78933526 -24561448 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 9 1187 332 262 25 0 chr15 78933526 78933606 -24561368 - PB1D9 SINE Alu -9 111 30 9 1187 371 303 83 26 chr15 78933625 78933781 -24561193 - B4A SINE B4 -113 179 15 9 1187 257 0 30 0 chr15 78934306 78934339 -24560635 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 9 1187 498 196 31 0 chr15 78934343 78934440 -24560534 - PB1D9 SINE Alu 0 120 21 9 1187 227 303 0 15 chr15 78934514 78934581 -24560393 - ID2 SINE ID -16 67 2 9 1187 906 60 96 7 chr15 78934746 78934881 -24560093 - B1_Mm SINE Alu 0 147 1 9 1187 421 292 106 155 chr15 78934894 78935003 -24559971 + MTEa LTR MaLR 3 138 -241 9 1187 1211 209 154 12 chr15 78935003 78935327 -24559647 - ORR1D1 LTR MaLR -2 372 3 9 1187 421 292 106 155 chr15 78935327 78935369 -24559605 + MTEa LTR MaLR 139 180 -199 9 1187 354 291 159 23 chr15 78935369 78935626 -24559348 + B4A SINE B4 1 292 0 9 1187 421 292 106 155 chr15 78935626 78935821 -24559153 + MTEa LTR MaLR 181 333 -46 9 1187 914 119 98 38 chr15 78935861 78936044 -24558930 - B2_Mm2 SINE B2 -1 194 1 9 1187 307 107 54 0 chr15 78936044 78936100 -24558874 - B2_Mm2 SINE B2 -13 182 124 9 1187 262 288 0 0 chr15 78936278 78936344 -24558630 - ID4_ SINE ID -13 70 5 9 1187 253 277 8 66 chr15 78936372 78936486 -24558488 + ID4_ SINE ID 10 117 -35 9 1187 630 210 42 0 chr15 78936486 78936629 -24558345 + B1_Mur3 SINE Alu 1 149 0 9 1187 417 320 27 0 chr15 78936779 78936929 -24558045 - MIRc SINE MIR -32 236 83 9 1187 212 240 19 39 chr15 78937133 78937185 -24557789 - PB1D10 SINE Alu -15 102 52 9 1187 432 255 180 0 chr15 78937563 78937724 -24557250 - B3 SINE B2 -7 209 20 9 1187 461 291 75 0 chr15 78937777 78937911 -24557063 - RSINE1 SINE B4 -19 146 3 9 1187 438 229 121 8 chr15 78937913 78938045 -24556929 - B1_Mur3 SINE Alu -2 147 1 9 1187 1036 72 7 0 chr15 78938152 78938291 -24556683 - B1_Mus1 SINE Alu -8 140 1 9 1187 259 336 118 1 chr15 78938372 78938496 -24556478 - MIRb SINE MIR -113 155 12 9 1187 25 83 0 0 chr15 78939317 78939377 -24555597 + GC_rich Low_complexity Low_complexity 1 60 0 9 1187 27 29 0 0 chr15 78939407 78939441 -24555533 + GC_rich Low_complexity Low_complexity 1 34 0 9 1187 23 33 0 0 chr15 78939534 78939564 -24555410 + GC_rich Low_complexity Low_complexity 1 30 0 9 1187 308 279 103 67 chr15 78941463 78941628 -24553346 + MIR SINE MIR 34 204 -58 9 1187 284 236 37 111 chr15 78941739 78941901 -24553073 + MT2B LTR ERVL 115 264 -337 9 1187 814 157 0 0 chr15 78941794 78941934 -24553040 + B1_Mur4 SINE Alu 9 148 -2 9 1187 251 304 0 0 chr15 78942245 78942314 -24552660 - ID4_ SINE ID -11 72 4 9 1187 432 0 0 0 chr15 78942417 78942465 -24552509 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 1187 1185 96 0 0 chr15 78942694 78942872 -24552102 + (TG)n Simple_repeat Simple_repeat 2 179 0 9 1187 231 235 40 105 chr15 78943022 78943098 -24551876 - B4 SINE B4 -221 71 1 9 1187 1161 51 0 0 chr15 78943751 78943889 -24551085 + B1_Mus2 SINE Alu 1 138 -9 9 1187 285 29 0 0 chr15 78943889 78943923 -24551051 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 9 1187 797 97 168 8 chr15 78944016 78944141 -24550833 + B1_Mur4 SINE Alu 5 149 -1 9 1187 546 216 133 7 chr15 78944174 78944309 -24550665 + B3 SINE B2 59 210 -6 9 1187 1522 59 43 0 chr15 78944860 78945047 -24549927 - B2_Mm2 SINE B2 0 195 1 9 1187 244 308 10 108 chr15 78945746 78945848 -24549126 + MT2B2 LTR ERVL 164 255 -329 9 1187 492 248 1 0 chr15 78945760 78945872 -24549102 + PB1D7 SINE Alu 15 127 -22 9 1187 493 249 195 0 chr15 78946362 78946531 -24548443 + B3 SINE B2 1 202 -14 9 1187 740 230 7 7 chr15 78946542 78946691 -24548283 + B1_Mur1 SINE Alu 1 149 0 9 1187 531 276 100 33 chr15 78946737 78946947 -24548027 + ID_B1 SINE B4 1 224 0 9 1187 321 288 14 0 chr15 78946967 78947040 -24547934 + RSINE1 SINE B4 71 144 -21 9 1187 433 284 130 33 chr15 78947095 78947281 -24547693 + B3 SINE B2 1 190 -26 9 1187 234 318 82 28 chr15 78947349 78947554 -24547420 + MIR SINE MIR 2 224 -44 9 1187 259 337 22 0 chr15 78947872 78947961 -24547013 - PB1D10 SINE Alu -19 98 8 9 1187 206 116 23 0 chr15 78948214 78948257 -24546717 + (TG)n Simple_repeat Simple_repeat 1 44 0 9 1187 772 221 0 0 chr15 78948845 78948994 -24545980 + B1_Mur2 SINE Alu 1 149 0 9 1187 882 216 64 15 chr15 78949276 78949478 -24545496 - B3 SINE B2 -2 214 3 9 1187 198 0 0 0 chr15 78949509 78949531 -24545443 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 9 1187 959 104 0 0 chr15 78949532 78949667 -24545307 - B1_Mm SINE Alu -4 143 9 9 1187 278 321 35 9 chr15 78950611 78950724 -24544250 - MIRb SINE MIR -84 184 69 9 1187 197 331 122 8 chr15 78950933 78951064 -24543910 + MIRc SINE MIR 35 180 -88 9 1187 636 206 152 45 chr15 78951541 78951719 -24543255 - B3A SINE B2 -1 197 1 9 1187 315 293 0 0 chr15 78951734 78951816 -24543158 - ID4_ SINE ID -1 82 1 1 1187 206 0 0 65 chr15 78952018 78952049 -24542925 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1187 1184 180 24 0 chr15 78952108 78952319 -24542655 + B3 SINE B2 1 216 0 1 1187 290 288 15 0 chr15 78952476 78952542 -24542432 + ID4_ SINE ID 3 69 -14 1 1187 832 213 4 140 chr15 78953522 78953751 -24541223 - B3A SINE B2 0 198 1 1 1187 1205 136 90 24 chr15 78954050 78954261 -24540713 + URR1B DNA MER1_type 1 225 0 1 1187 185 308 0 19 chr15 78954648 78954701 -24540273 - L2c LINE L2 -224 3163 3112 1 1187 197 329 38 38 chr15 78955359 78955438 -24539536 - MIR SINE MIR -77 185 107 1 1187 201 128 135 34 chr15 78955905 78955994 -24538980 + (CCCCAG)n Simple_repeat Simple_repeat 3 100 0 1 1187 463 214 7 125 chr15 78956981 78957003 -24537971 + MT2B LTR ERVL 152 156 -445 1 1187 815 105 8 0 chr15 78957003 78957127 -24537847 + B1_Mus1 SINE Alu 1 125 -23 1 1187 565 279 5 71 chr15 78958793 78959005 -24535969 - B3A SINE B2 0 198 1 1 1187 1278 112 28 0 chr15 78959222 78959401 -24535573 - B2_Mm2 SINE B2 -10 185 2 1 1187 1019 122 20 0 chr15 78959449 78959596 -24535378 + B1_Mur4 SINE Alu 1 150 0 1 1187 474 101 0 0 chr15 78959608 78959677 -24535297 + (GGGA)n Simple_repeat Simple_repeat 4 72 0 1 1187 320 193 0 0 chr15 78959874 78959931 -24535043 - B1F2 SINE Alu -53 96 40 1 1187 702 123 9 0 chr15 78961551 78961657 -24533317 - B1_Mur4 SINE Alu -42 108 2 1 1187 187 228 115 42 chr15 78962883 78962979 -24531995 + MIR SINE MIR 37 139 -69 1 1187 378 0 0 0 chr15 78966014 78966056 -24528918 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1187 491 299 81 7 chr15 78967386 78967534 -24527440 - RSINE1 SINE B4 -4 161 3 1 1187 275 287 61 53 chr15 78967547 78967661 -24527313 - PB1D7 SINE Alu 0 120 6 1 1187 258 283 84 32 chr15 78967576 78967671 -24527303 - B4A SINE B4 -118 174 75 1 1187 348 93 0 39 chr15 78968213 78968291 -24526683 + (TTTTG)n Simple_repeat Simple_repeat 2 76 0 1 1187 265 253 67 0 chr15 78968399 78968474 -24526500 - B3 SINE B2 0 216 137 1 1187 470 173 0 0 chr15 78968473 78968554 -24526420 + B1_Mur3 SINE Alu 67 147 -2 1 1187 515 297 109 0 chr15 78968555 78968720 -24526254 - B3A SINE B2 -1 197 15 1 1187 964 126 0 0 chr15 78968825 78968968 -24526006 - B1_Mm SINE Alu 0 147 5 1 1187 1224 74 0 107 chr15 78968973 78969169 -24525805 - B2_Mm2 SINE B2 -18 177 3 1 1187 1244 54 0 0 chr15 78969186 78969333 -24525641 - B1_Mus1 SINE Alu -1 147 1 1 1187 255 254 17 0 chr15 78969344 78969403 -24525571 - B1_Mur2 SINE Alu -5 144 85 1 1187 815 168 27 47 chr15 78969447 78969597 -24525377 + B1_Mus2 SINE Alu 1 147 0 1 1187 203 159 45 0 chr15 78969901 78969945 -24525029 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 1 1187 653 259 7 7 chr15 78969945 78970093 -24524881 - B1_Mur2 SINE Alu -1 148 1 1 1187 970 132 41 62 chr15 78970116 78970310 -24524664 + B2_Mm2 SINE B2 2 191 -4 1 1187 327 130 0 0 chr15 78970314 78970368 -24524606 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1187 635 291 19 0 chr15 78970373 78970531 -24524443 - B3A SINE B2 -36 162 2 1 1187 312 250 112 0 chr15 78970636 78970716 -24524258 - B3A SINE B2 -106 92 4 1 1187 255 312 12 70 chr15 78970732 78970818 -24524156 - ID4_ SINE ID -1 82 2 1 1187 707 236 7 7 chr15 78972207 78972356 -24522618 - B1F SINE Alu 0 149 1 1 1187 1009 92 42 14 chr15 78972374 78972518 -24522456 - B1_Mus1 SINE Alu 0 148 1 1 1187 21 0 0 0 chr15 78972522 78972543 -24522431 + AT_rich Low_complexity Low_complexity 1 21 0 1 1187 783 219 7 7 chr15 78972631 78972778 -24522196 - B1_Mur1 SINE Alu 0 149 3 1 1187 584 204 69 27 chr15 78972891 78973030 -24521944 + B1F SINE Alu 3 125 -24 1 1187 289 284 62 75 chr15 78972909 78973069 -24521905 - YREP_Mm Unknown Unknown -1516 296 139 1 1187 491 186 52 88 chr15 78973243 78973379 -24521595 + B1_Mur1 SINE Alu 1 131 -18 1 1187 1714 31 0 0 chr15 78973421 78973614 -24521360 - B2_Mm1t SINE B2 0 193 1 1 1187 1623 53 0 0 chr15 78973614 78973802 -24521172 - B2_Mm1t SINE B2 -4 189 2 1 1187 249 326 53 30 chr15 78973838 78973971 -24521003 - L2 LINE L2 -1409 2010 1875 1 1187 351 258 19 58 chr15 78973978 78974081 -24520893 + RSINE1 SINE B4 2 100 -65 1 1187 243 0 0 0 chr15 78974218 78974245 -24520729 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1187 241 278 0 40 chr15 78974346 78974421 -24520553 - ID4_ SINE ID -10 73 2 1 1187 491 266 8 34 chr15 78974436 78974553 -24520421 - PB1D10 SINE Alu -2 115 2 1 1187 356 252 1 53 chr15 78974672 78974780 -24520194 + B3A SINE B2 101 203 -13 1 1187 465 186 0 11 chr15 78975293 78975380 -24519594 - B1_Mur1 SINE Alu -43 106 21 1 1187 233 304 114 0 chr15 78975389 78975468 -24519506 + L2a LINE L2 3327 3414 -12 1 1187 752 308 74 22 chr15 78975527 78975796 -24519178 - B4A SINE B4 -8 284 2 1 1187 182 303 78 52 chr15 78975923 78975959 -24519015 - L3b LINE CR1 -233 249 214 1 1187 630 0 0 0 chr15 78975959 78976029 -24518945 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1187 182 303 78 52 chr15 78976029 78976107 -24518867 - L3b LINE CR1 -269 213 132 1 1187 1233 41 7 0 chr15 78976774 78976920 -24518054 + B1_Mm SINE Alu 1 147 0 1 1187 376 247 41 10 chr15 78976952 78977050 -24517924 + B1F SINE Alu 48 148 -1 1 1187 756 224 0 7 chr15 78977724 78977872 -24517102 + B1_Mur2 SINE Alu 1 147 -2 1 1187 180 111 0 0 chr15 78977935 78977962 -24517012 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1187 191 337 67 34 chr15 78978108 78978197 -24516777 - L2c LINE L2 -5 3382 3291 1 1187 219 250 0 0 chr15 78978430 78978474 -24516500 + RSINE1 SINE B4 71 114 -51 1 1187 304 289 0 88 chr15 78978559 78978650 -24516324 + B3A SINE B2 116 198 0 1 1187 344 299 51 71 chr15 78978725 78978866 -24516108 + B3A SINE B2 81 216 0 1 1187 322 360 98 1 chr15 78979662 78979847 -24515127 + B3A SINE B2 14 213 -3 1 1187 587 74 74 0 chr15 78980569 78980650 -24514324 + 4.5SRNA scRNA scRNA 5 91 -3 1 1187 1055 109 103 0 chr15 78980650 78980815 -24514159 + B2_Mm2 SINE B2 2 183 -12 1 1187 243 114 0 0 chr15 78980834 78980878 -24514096 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 1 1187 1257 41 0 0 chr15 78980887 78981032 -24513942 - B1_Mm SINE Alu 0 147 3 1 1187 22 0 0 54 chr15 78981032 78981049 -24513925 + AT_rich Low_complexity Low_complexity 1 16 0 1 1187 1156 82 0 7 chr15 78981049 78981196 -24513778 - B1_Mus2 SINE Alu -1 146 1 1 1187 22 0 0 54 chr15 78981196 78981215 -24513759 + AT_rich Low_complexity Low_complexity 1 19 0 1 1187 518 238 35 2 chr15 78981369 78981508 -24513466 + MIR SINE MIR 40 190 -78 1 1187 201 233 0 0 chr15 78982318 78982361 -24512613 + C-rich Low_complexity Low_complexity 2 44 0 1 1187 440 252 154 0 chr15 78982866 78982989 -24511985 + ID_B1 SINE B4 70 211 -13 1 1187 189 355 107 8 chr15 78987426 78987548 -24507426 - L2b LINE L2 0 3375 3242 1 1187 280 201 146 38 chr15 78987838 78987966 -24507008 + MIRb SINE MIR 25 169 -107 1 1187 248 154 31 0 chr15 78988824 78988889 -24506085 + (TCTCTG)n Simple_repeat Simple_repeat 6 72 0 1 1187 684 158 0 180 chr15 78988916 78989094 -24505880 - B1_Mus2 SINE Alu 0 147 2 1 1187 233 200 8 83 chr15 78989109 78989229 -24505745 + T-rich Low_complexity Low_complexity 4 114 0 1 1187 264 296 39 31 chr15 78990030 78990159 -24504815 + L3 LINE CR1 4249 4378 -111 1 1187 378 284 121 18 chr15 78990160 78990298 -24504676 + MIRb SINE MIR 65 214 -48 1 1187 26 64 0 0 chr15 78994152 78994199 -24500775 + GC_rich Low_complexity Low_complexity 1 47 0 1 1187 216 67 0 0 chr15 78994422 78994452 -24500522 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1187 182 178 44 0 chr15 78994939 78994984 -24499990 + GA-rich Low_complexity Low_complexity 1 47 0 1 1187 207 0 0 0 chr15 78997098 78997121 -24497853 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 1 1187 289 248 30 67 chr15 78998111 78998245 -24496729 - B1F1 SINE Alu -15 134 6 1 1187 231 351 48 75 chr15 78998710 78998898 -24496076 + MIRb SINE MIR 70 252 -16 1 1187 208 290 176 9 chr15 78999220 78999328 -24495646 - MIR SINE MIR -34 228 103 1 1187 236 233 62 14 chr15 79000332 79000422 -24494552 + MIR3 SINE MIR 81 174 -88 1 1187 630 71 0 0 chr15 79000561 79000645 -24494329 + (TTTC)n Simple_repeat Simple_repeat 2 85 0 2 1187 939 170 0 7 chr15 79000645 79000793 -24494181 - B1_Mus1 SINE Alu 0 148 2 3 1187 532 112 0 63 chr15 79000871 79000966 -24494008 - B1_Mur2 SINE Alu 0 149 61 4 1187 229 178 0 82 chr15 79000932 79000981 -24493993 - 4.5SRNA scRNA scRNA -5 89 45 5 1187 441 283 34 34 chr15 79000996 79001113 -24493861 - B1F1 SINE Alu -21 128 12 6 1187 1061 128 0 11 chr15 79002231 79002412 -24492562 + (TTCA)n Simple_repeat Simple_repeat 1 179 0 7 1187 304 374 99 43 chr15 79002855 79003017 -24491957 + MIR SINE MIR 15 185 -77 8 1187 1247 34 0 0 chr15 79003642 79003789 -24491185 - B1_Mus2 SINE Alu 0 147 1 9 1187 716 20 39 0 chr15 79005276 79005378 -24489596 + (TC)n Simple_repeat Simple_repeat 1 106 0 1 1187 547 186 82 33 chr15 79005378 79005500 -24489474 - B1_Mur2 SINE Alu -16 133 6 1 1187 324 0 0 0 chr15 79005588 79005624 -24489350 + (TC)n Simple_repeat Simple_repeat 1 36 0 1 1187 444 37 0 0 chr15 79006632 79006686 -24488288 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 1187 796 81 82 68 chr15 79007583 79007729 -24487245 + B1_Mus1 SINE Alu 1 148 0 1 1187 216 204 0 0 chr15 79007789 79007833 -24487141 + T-rich Low_complexity Low_complexity 1 44 0 1 1187 522 189 0 102 chr15 79007873 79007991 -24486983 - PB1D9 SINE Alu -14 106 1 1 1187 637 267 47 24 chr15 79008581 79008792 -24486182 - MTEb LTR MaLR 0 379 164 1 1187 623 244 50 19 chr15 79008781 79008940 -24486034 - B3A SINE B2 -1 197 34 1 1187 536 248 83 18 chr15 79008982 79009150 -24485824 - MTEb LTR MaLR -197 182 4 1 1187 996 120 28 0 chr15 79010216 79010358 -24484616 - B1_Mus2 SINE Alu -1 146 1 1 1187 947 270 63 35 chr15 79010506 79010790 -24484184 + B4A SINE B4 1 292 0 2 1187 820 188 0 0 chr15 79010839 79010977 -24483997 + B1_Mus1 SINE Alu 1 138 -10 2 1187 268 239 52 42 chr15 79011011 79011107 -24483867 - PB1D10 SINE Alu 0 117 21 2 1187 253 145 77 46 chr15 79011118 79011183 -24483791 - B1F SINE Alu 0 149 83 2 1187 226 220 118 35 chr15 79011183 79011203 -24483771 - ID_B1 SINE B4 0 224 133 2 1187 682 264 28 22 chr15 79011479 79011661 -24483313 + B3A SINE B2 2 184 -14 2 1187 693 207 44 7 chr15 79011689 79011825 -24483149 - B1_Mur2 SINE Alu -8 141 1 2 1187 26 30 0 0 chr15 79011825 79011858 -24483116 + AT_rich Low_complexity Low_complexity 1 33 0 2 1187 225 307 13 0 chr15 79011997 79012072 -24482902 - L2a LINE L2 -218 3157 3082 2 1187 183 129 0 0 chr15 79012229 79012260 -24482714 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1187 316 230 40 13 chr15 79012325 79012400 -24482574 - ID2 SINE ID -6 77 1 3 1187 183 147 0 0 chr15 79013334 79013359 -24481615 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 3 1187 852 242 14 81 chr15 79013359 79013570 -24481404 - B3A SINE B2 0 198 2 3 1187 183 147 0 0 chr15 79013570 79013578 -24481396 + (TTTA)n Simple_repeat Simple_repeat 1 8 0 3 1187 206 32 32 0 chr15 79013749 79013780 -24481194 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 3 1187 1140 43 7 0 chr15 79013780 79013918 -24481056 - B1_Mm SINE Alu -8 139 1 3 1187 715 216 117 3 chr15 79014091 79014320 -24480654 - B4A SINE B4 0 292 38 3 1187 244 228 0 17 chr15 79014299 79014357 -24480617 - B1F SINE Alu -92 57 1 3 1187 229 305 99 0 chr15 79014499 79014630 -24480344 - L2a LINE L2 -320 3106 2963 2 1187 360 192 191 9 chr15 79014849 79014954 -24480020 + B1F SINE Alu 9 132 -17 3 1187 408 73 0 0 chr15 79015008 79015063 -24479911 + B1_Mus1 SINE Alu 1 55 -93 3 1187 259 333 0 0 chr15 79015064 79015157 -24479817 + G-rich Low_complexity Low_complexity 4 96 0 4 1187 449 143 36 0 chr15 79015160 79015244 -24479730 + B1_Mus2 SINE Alu 40 126 -21 4 1187 1147 331 40 48 chr15 79015542 79016224 -24478750 - L1ME1 LINE L1 -172 6007 5332 4 1187 684 252 75 47 chr15 79016250 79016462 -24478512 + ID_B1 SINE B4 5 222 -2 4 1187 674 254 47 52 chr15 79016585 79016797 -24478177 + B3 SINE B2 6 216 0 4 1187 354 264 72 9 chr15 79016797 79016908 -24478066 - L1MC LINE L1 -830 5316 5199 4 1187 334 279 22 96 chr15 79016914 79017049 -24477925 + MT2B LTR ERVL 153 277 -324 4 1187 803 174 14 0 chr15 79016938 79017076 -24477898 + B1_Mur1 SINE Alu 9 148 -1 4 1187 1172 70 0 0 chr15 79017078 79017221 -24477753 - B1_Mus1 SINE Alu -5 143 1 4 1187 672 258 52 91 chr15 79017465 79017580 -24477394 - MTD LTR MaLR -186 233 116 4 1187 1197 75 0 0 chr15 79017580 79017727 -24477247 + B1_Mm SINE Alu 1 147 0 5 1187 672 258 52 91 chr15 79017727 79017841 -24477133 - MTD LTR MaLR -304 115 13 4 1187 751 303 0 0 chr15 79017917 79018082 -24476892 - RSINE1 SINE B4 0 165 1 5 1187 1077 128 0 0 chr15 79018177 79018325 -24476649 - B1_Mus1 SINE Alu 0 148 1 5 1187 26 0 0 0 chr15 79018326 79018352 -24476622 + AT_rich Low_complexity Low_complexity 1 26 0 5 1187 298 320 95 38 chr15 79018428 79018691 -24476283 - B4 SINE B4 -14 278 1 5 1187 342 323 63 68 chr15 79018692 79018898 -24476076 - L1ME1 LINE L1 -1535 4611 4407 4 1187 736 123 8 16 chr15 79018920 79019044 -24475930 + B3 SINE B2 2 124 -92 5 1187 2765 49 18 33 chr15 79019090 79019288 -24475686 - MTB LTR MaLR -8 392 197 5 1187 1491 78 5 0 chr15 79019288 79019479 -24475495 - B2_Mm1a SINE B2 0 193 2 5 1187 2765 49 18 33 chr15 79019479 79019678 -24475296 - MTB LTR MaLR -204 196 1 5 1187 310 227 133 0 chr15 79019769 79019844 -24475130 - RSINE1 SINE B4 -69 96 12 5 1187 1230 168 0 46 chr15 79019923 79020142 -24474832 - B3 SINE B2 -7 209 1 5 1187 282 220 68 0 chr15 79020288 79020347 -24474627 - B1_Mur1 SINE Alu -14 135 73 6 1187 1157 68 7 0 chr15 79020365 79020512 -24474462 - B1_Mus1 SINE Alu 0 148 1 6 1187 250 210 47 31 chr15 79020514 79020526 -24474448 + PB1D7 SINE Alu 56 120 0 6 1187 282 140 0 39 chr15 79020526 79020578 -24474396 + ID_B1 SINE B4 175 224 0 6 1187 629 178 6 19 chr15 79020581 79020741 -24474233 + GA-rich Low_complexity Low_complexity 3 160 0 6 1187 349 192 10 20 chr15 79020820 79020921 -24474053 + CT-rich Low_complexity Low_complexity 3 102 0 6 1187 282 331 94 61 chr15 79020932 79021260 -24473714 - L1MC4a LINE L1 -236 7646 7308 6 1187 602 267 8 0 chr15 79021433 79021564 -24473410 - RSINE1 SINE B4 -29 136 5 6 1187 180 0 0 0 chr15 79021627 79021647 -24473327 + (TATG)n Simple_repeat Simple_repeat 2 21 0 6 1187 1049 98 0 0 chr15 79021648 79021801 -24473173 - B2_Mm2 SINE B2 -41 154 2 6 1187 226 295 0 0 chr15 79021819 79021880 -24473094 - L1MC4a LINE L1 -1421 6364 6304 6 1187 307 280 173 70 chr15 79021944 79021992 -24472982 - L1ME1 LINE L1 -1721 4425 4383 4 1187 929 212 20 10 chr15 79021992 79022187 -24472787 - B3A SINE B2 0 198 2 7 1187 307 280 173 70 chr15 79022187 79022438 -24472536 - L1ME1 LINE L1 -1764 4382 4095 4 1187 420 55 0 0 chr15 79023809 79023864 -24471110 + (GA)n Simple_repeat Simple_repeat 1 55 0 7 1187 181 318 44 66 chr15 79024780 79024871 -24470103 + MIRb SINE MIR 100 188 -80 7 1187 232 277 15 0 chr15 79025434 79025499 -24469475 + (TTAGGG)n Simple_repeat Simple_repeat 1 66 0 7 1187 975 241 33 9 chr15 79026349 79026563 -24468411 + ID_B1 SINE B4 1 219 -5 7 1187 632 282 59 39 chr15 79027485 79027688 -24467286 + B3 SINE B2 2 208 -8 7 1187 313 184 24 95 chr15 79027725 79027809 -24467165 - ID4_ SINE ID -1 82 5 7 1187 1375 50 48 21 chr15 79027877 79028063 -24466911 - B2_Mm1a SINE B2 -1 192 2 7 1187 1151 75 7 0 chr15 79028160 79028306 -24466668 - B1_Mus1 SINE Alu 0 148 2 7 1187 770 271 36 24 chr15 79028683 79028942 -24466032 + ID_B1 SINE B4 8 272 -20 7 1187 527 293 106 17 chr15 79029032 79029324 -24465650 - L1MB3 LINE L1 -17 6166 5849 8 1187 262 333 0 41 chr15 79029364 79029461 -24465513 - RSINE1 SINE B4 -60 105 13 8 1187 302 283 96 32 chr15 79029478 79029635 -24465339 - L1MB3 LINE L1 -360 5823 5657 8 1187 432 0 0 0 chr15 79029894 79029942 -24465032 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 1187 1029 92 50 0 chr15 79030397 79030538 -24464436 - B1_Mus1 SINE Alu 0 148 1 8 1187 716 202 31 0 chr15 79030568 79030697 -24464277 + B1_Mur1 SINE Alu 1 133 -16 8 1187 25 31 0 0 chr15 79030702 79030734 -24464240 + AT_rich Low_complexity Low_complexity 1 32 0 8 1187 234 91 0 0 chr15 79030735 79030768 -24464206 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 8 1187 468 244 116 16 chr15 79030800 79030921 -24464053 - RSINE1 SINE B4 -31 134 2 8 1187 215 279 16 0 chr15 79031429 79031490 -24463484 + L2b LINE L2 3216 3277 -98 8 1187 258 275 40 43 chr15 79031884 79032015 -24462959 + MIR3 SINE MIR 72 199 -9 8 1187 456 19 0 0 chr15 79032613 79032666 -24462308 + (TTCA)n Simple_repeat Simple_repeat 4 56 0 9 1187 778 169 215 42 chr15 79033664 79033855 -24461119 + ID_B1 SINE B4 1 224 0 9 1187 439 267 66 7 chr15 79033865 79034001 -24460973 + RSINE1 SINE B4 3 146 -19 9 1187 264 30 0 0 chr15 79034047 79034080 -24460894 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1187 1151 156 6 0 chr15 79034736 79034916 -24460058 + B3 SINE B2 6 186 -30 9 1187 308 156 0 99 chr15 79034916 79034987 -24459987 + B3 SINE B2 149 212 -4 9 1187 434 282 0 18 chr15 79035092 79035204 -24459770 + PB1D10 SINE Alu 1 110 -7 9 1188 520 248 205 0 chr15 79036853 79037014 -24457960 - B3A SINE B2 -3 195 2 9 1188 961 140 0 14 chr15 79037039 79037177 -24457797 - B1_Mur4 SINE Alu -13 137 2 9 1188 273 246 85 34 chr15 79037178 79037296 -24457678 - L1MC4 LINE L1 0 8042 7919 9 1188 239 299 92 10 chr15 79037426 79037524 -24457450 - L1MC4 LINE L1 -208 7834 7729 9 1188 189 0 0 0 chr15 79037525 79037546 -24457428 + (TTG)n Simple_repeat Simple_repeat 2 22 0 1 1188 1249 54 0 0 chr15 79037553 79037701 -24457273 - B1_Mus1 SINE Alu 0 148 1 1 1188 197 345 55 11 chr15 79037924 79038015 -24456959 + L2b LINE L2 3237 3331 -44 1 1188 225 175 0 24 chr15 79038631 79038672 -24456302 + G-rich Low_complexity Low_complexity 5 44 0 1 1188 414 0 0 0 chr15 79040146 79040192 -24454782 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1188 276 275 56 40 chr15 79040215 79040385 -24454589 + MIR SINE MIR 6 172 -90 1 1188 25 0 0 0 chr15 79040492 79040517 -24454457 + AT_rich Low_complexity Low_complexity 1 25 0 1 1188 219 69 0 0 chr15 79040531 79040560 -24454414 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1 1188 862 103 79 22 chr15 79041312 79041451 -24453523 - B1_Mus1 SINE Alu -1 147 1 1 1188 338 313 52 26 chr15 79042031 79042261 -24452713 + L2a LINE L2 2917 3157 -269 1 1188 377 258 22 0 chr15 79042303 79042392 -24452582 - PB1D10 SINE Alu -21 96 6 1 1188 238 293 18 100 chr15 79042304 79042414 -24452560 - MT2B LTR ERVL -350 251 151 1 1188 345 125 0 0 chr15 79042621 79042677 -24452297 + (GGGA)n Simple_repeat Simple_repeat 3 58 0 1 1188 217 292 30 15 chr15 79042682 79042748 -24452226 + G-rich Low_complexity Low_complexity 4 70 0 1 1188 204 317 16 12 chr15 79044183 79044278 -24450696 - MIRc SINE MIR -77 191 93 1 1188 205 269 75 88 chr15 79044656 79044803 -24450171 - L2b LINE L2 -175 3212 3068 1 1188 195 42 0 0 chr15 79044939 79044963 -24450011 + (ATTG)n Simple_repeat Simple_repeat 1 24 0 1 1188 604 220 0 8 chr15 79044968 79045087 -24449887 - B1_Mur3 SINE Alu -25 124 7 1 1188 298 377 36 25 chr15 79045087 79045161 -24449813 - ID_B1 SINE B4 -18 203 9 1 1188 273 331 80 8 chr15 79045286 79045411 -24449563 + MIRb SINE MIR 123 256 -12 1 1188 196 331 34 48 chr15 79045509 79045655 -24449319 - MIRb SINE MIR -62 206 63 1 1188 455 274 80 8 chr15 79047683 79047808 -24447166 + B4 SINE B4 1 134 -158 1 1188 1112 221 29 0 chr15 79047826 79048070 -24446904 - RLTR11A2 LTR ERVK 0 527 277 1 1188 1144 95 0 0 chr15 79048070 79048217 -24446757 - B1_Mm SINE Alu 0 147 1 1 1188 1088 217 33 40 chr15 79048217 79048246 -24446728 - RLTR11A2 LTR ERVK -253 275 257 1 1188 1102 80 127 18 chr15 79048253 79048419 -24446555 - B2_Mm2 SINE B2 -9 186 3 1 1188 233 184 0 0 chr15 79048444 79048482 -24446492 + B1_Mus1 SINE Alu 5 42 -106 1 1188 564 277 45 11 chr15 79048568 79048740 -24446234 + B3A SINE B2 12 190 -8 1 1188 1107 128 38 27 chr15 79048740 79048924 -24446050 - B2_Mm2 SINE B2 -8 187 2 1 1188 21 0 0 0 chr15 79048935 79048956 -24446018 + AT_rich Low_complexity Low_complexity 1 21 0 1 1188 708 99 0 0 chr15 79048960 79049061 -24445913 + B2_Mm2 SINE B2 1 101 -94 1 1188 297 0 0 0 chr15 79049085 79049118 -24445856 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 1 1188 184 368 65 19 chr15 79049199 79049307 -24445667 + L2c LINE L2 3237 3349 -38 1 1188 1230 131 0 0 chr15 79049474 79049875 -24445099 + (TG)n Simple_repeat Simple_repeat 1 401 0 1 1188 528 281 39 7 chr15 79051165 79051319 -24443655 + RSINE1 SINE B4 7 165 0 1 1188 479 196 8 0 chr15 79051320 79051453 -24443521 + (CA)n Simple_repeat Simple_repeat 2 135 0 1 1188 553 295 7 0 chr15 79051471 79051620 -24443354 - B3 SINE B2 -14 202 53 1 1188 1223 85 73 0 chr15 79051655 79051832 -24443142 - B2_Mm2 SINE B2 -5 190 1 1 1188 231 248 18 232 chr15 79051857 79051916 -24443058 + ID_B1 SINE B4 80 135 -89 1 1188 942 223 48 10 chr15 79051916 79052124 -24442850 + B3 SINE B2 1 216 0 1 1188 231 248 18 232 chr15 79052124 79052140 -24442834 + ID_B1 SINE B4 136 211 -13 1 1188 352 272 22 0 chr15 79052140 79052232 -24442742 + B1F SINE Alu 43 136 -13 1 1188 21 0 0 0 chr15 79052232 79052253 -24442721 + AT_rich Low_complexity Low_complexity 1 21 0 1 1188 262 290 90 0 chr15 79052286 79052386 -24442588 + L1MB8 LINE L1 5839 5947 -231 1 1188 250 309 39 90 chr15 79052413 79052591 -24442383 + L1MB8 LINE L1 6002 6170 -14 1 1188 472 120 0 24 chr15 79052654 79052739 -24442235 - PB1D9 SINE Alu -2 118 36 1 1188 426 286 0 0 chr15 79052756 79052861 -24442113 - PB1D10 SINE Alu 0 117 13 1 1188 215 318 0 0 chr15 79052812 79052875 -24442099 - B4A SINE B4 -146 146 84 1 1188 408 275 108 40 chr15 79052989 79053137 -24441837 + RSINE1 SINE B4 2 159 -6 1 1188 832 143 14 0 chr15 79053426 79053566 -24441408 + B1_Mur3 SINE Alu 8 149 0 1 1188 236 149 0 21 chr15 79054115 79054163 -24440811 + GA-rich Low_complexity Low_complexity 1 47 0 1 1188 230 371 38 8 chr15 79054537 79054670 -24440304 - L2a LINE L2 -23 3403 3267 1 1188 345 93 0 0 chr15 79054671 79054725 -24440249 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1188 303 303 0 26 chr15 79056146 79056224 -24438750 - ID4 SINE ID -3 80 5 1 1188 1141 90 0 0 chr15 79056239 79056384 -24438590 - B1_Mm SINE Alu 0 147 3 1 1188 1014 144 70 27 chr15 79056385 79056570 -24438404 - B2_Mm2 SINE B2 -1 194 2 1 1188 1011 118 14 7 chr15 79056610 79056755 -24438219 + B1_Mur4 SINE Alu 1 146 -4 1 1188 1206 120 42 32 chr15 79056887 79057076 -24437898 + B2_Mm2 SINE B2 2 192 -3 1 1188 1058 95 7 0 chr15 79057261 79057398 -24437576 - B1_Mus1 SINE Alu -10 138 1 1 1188 197 396 19 9 chr15 79057482 79057589 -24437385 - MIRm SINE MIR -123 153 46 1 1188 3139 44 46 3 chr15 79057867 79058256 -24436718 + MTB_Mm LTR MaLR 1 406 -1 1 1188 2266 225 48 22 chr15 79058376 79058875 -24436099 - RLTR18B LTR ERVK 0 512 1 1 1188 251 28 0 27 chr15 79061183 79061220 -24433754 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1188 275 350 86 86 chr15 79061226 79061434 -24433540 + B4 SINE B4 54 265 -27 1 1188 207 100 0 0 chr15 79061434 79061464 -24433510 + (CATA)n Simple_repeat Simple_repeat 1 30 0 1 1188 275 350 86 86 chr15 79061464 79061489 -24433485 + B4 SINE B4 266 287 -5 1 1188 273 290 130 9 chr15 79061574 79061682 -24433292 - RSINE1 SINE B4 -2 163 43 1 1188 423 0 0 0 chr15 79061696 79061743 -24433231 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1188 416 284 78 16 chr15 79062035 79062164 -24432810 + ID_B1 SINE B4 86 222 -2 1 1188 262 217 0 32 chr15 79062214 79062276 -24432698 + MIR SINE MIR 95 154 -108 1 1188 269 192 295 31 chr15 79062281 79062410 -24432564 + B3 SINE B2 54 216 0 1 1188 315 0 0 0 chr15 79063139 79063174 -24431800 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1188 501 274 53 27 chr15 79063175 79063325 -24431649 - B3A SINE B2 -38 160 7 1 1188 1126 199 14 5 chr15 79063618 79063825 -24431149 - B3 SINE B2 -6 210 2 1 1188 684 0 0 0 chr15 79063834 79063910 -24431064 + (TCTCC)n Simple_repeat Simple_repeat 3 78 0 1 1188 261 0 0 0 chr15 79063910 79063939 -24431035 + (TTTC)n Simple_repeat Simple_repeat 3 31 0 1 1188 266 277 146 19 chr15 79063939 79064042 -24430932 - PB1D10 SINE Alu 0 117 2 1 1188 995 256 10 0 chr15 79064405 79064612 -24430362 - B3 SINE B2 -6 210 2 1 1188 364 281 0 80 chr15 79064633 79064647 -24430327 + MT2B LTR ERVL 152 156 -445 1 1188 868 147 21 0 chr15 79064647 79064790 -24430184 + B1_Mus2 SINE Alu 2 147 0 1 1188 208 139 0 0 chr15 79064792 79064828 -24430146 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1 1188 282 87 0 0 chr15 79064857 79064903 -24430071 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1188 368 287 15 62 chr15 79064903 79065033 -24429941 - RSINE1 SINE B4 -41 124 1 1 1188 231 262 50 0 chr15 79065230 79065310 -24429664 - L1MB3 LINE L1 -186 5997 5914 1 1188 737 288 19 45 chr15 79065464 79065790 -24429184 - L1M3 LINE L1 -1347 4793 4510 1 1188 261 228 248 0 chr15 79065938 79066039 -24428935 - MTEa LTR MaLR -195 184 59 1 1188 439 326 46 8 chr15 79066258 79066388 -24428586 - RSINE1 SINE B4 0 165 31 1 1188 466 231 58 0 chr15 79066401 79066522 -24428452 - ID_B1 SINE B4 -1 223 96 1 1188 285 128 0 0 chr15 79066524 79066571 -24428403 + (CATA)n Simple_repeat Simple_repeat 2 48 0 1 1188 808 139 72 7 chr15 79066598 79066736 -24428238 - B1_Mus1 SINE Alu -1 147 1 1 1188 1190 318 116 28 chr15 79066754 79067298 -24427676 - MTE-int LTR MaLR -155 1425 834 1 1188 383 233 100 6 chr15 79067407 79067567 -24427407 - MTD LTR MaLR 0 419 245 1 1188 1121 95 63 5 chr15 79067634 79067824 -24427150 - MTC LTR MaLR -117 304 104 1 1188 741 98 8 16 chr15 79067826 79067950 -24427024 - URR1B DNA MER1_type -2 223 101 1 1188 503 272 95 45 chr15 79067998 79068211 -24426763 - MTC LTR MaLR -311 110 1 1 1188 493 206 56 0 chr15 79068211 79068318 -24426656 - PB1D9 SINE Alu -7 113 1 1 1188 336 355 169 54 chr15 79068318 79068772 -24426202 - MTC-int LTR MaLR -1054 526 2 1 1188 484 182 101 0 chr15 79069191 79069290 -24425684 + PB1D10 SINE Alu 1 109 -8 1 1188 558 0 0 0 chr15 79070834 79070896 -24424078 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 1188 980 205 49 15 chr15 79070914 79071117 -24423857 - B3 SINE B2 -6 210 1 1 1188 2692 91 19 63 chr15 79071986 79072398 -24422576 - ORR1B1 LTR MaLR 0 394 1 1 1188 1374 81 0 6 chr15 79072555 79072569 -24422405 - B2_Mm1t SINE B2 -19 174 161 1 1188 213 65 0 0 chr15 79072569 79072600 -24422374 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1 1188 1374 81 0 6 chr15 79072600 79072760 -24422214 - B2_Mm1t SINE B2 -33 160 1 1 1188 731 121 9 0 chr15 79072766 79072882 -24422092 - B1_Mus2 SINE Alu -19 128 12 1 1188 444 252 8 23 chr15 79072770 79072900 -24422074 - ID_B1 SINE B4 -21 203 76 1 1188 381 220 23 117 chr15 79072782 79072946 -24422028 - MT2B LTR ERVL -320 264 118 1 1188 954 0 0 0 chr15 79074437 79074543 -24420431 + (TCCCC)n Simple_repeat Simple_repeat 3 108 0 2 1188 247 312 106 28 chr15 79074619 79074761 -24420213 + MIRb SINE MIR 85 237 -31 2 1188 1097 184 101 0 chr15 79074967 79075195 -24419779 - RLTR28B LTR ERVL -230 251 1 2 1188 253 259 140 18 chr15 79076063 79076177 -24418797 - MIR SINE MIR -62 146 19 2 1188 591 250 135 26 chr15 79078006 79078036 -24416938 - B3 SINE B2 -2 214 189 2 1188 564 116 0 0 chr15 79078036 79078122 -24416852 + (TATG)n Simple_repeat Simple_repeat 4 89 0 2 1188 591 250 135 26 chr15 79078122 79078284 -24416690 - B3 SINE B2 -28 188 1 2 1188 207 0 0 0 chr15 79078297 79078320 -24416654 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 1188 180 77 0 0 chr15 79079314 79079340 -24415634 + (GGA)n Simple_repeat Simple_repeat 2 27 0 2 1188 232 208 38 0 chr15 79080972 79081025 -24413949 + B1F1 SINE Alu 2 56 -93 2 1188 342 0 0 0 chr15 79084781 79084819 -24410155 + (GA)n Simple_repeat Simple_repeat 1 38 0 2 1188 338 77 0 0 chr15 79085790 79085842 -24409132 - MTB-int LTR MaLR -2 1096 1045 2 1188 196 28 26 53 chr15 79087013 79087051 -24407923 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 2 1188 5671 94 61 82 chr15 79087087 79088170 -24406804 - MTB-int LTR MaLR -38 1060 1 2 1188 3452 38 2 0 chr15 79088170 79088569 -24406405 - MTB LTR MaLR 0 400 1 2 1188 21 0 0 0 chr15 79088638 79088659 -24406315 + AT_rich Low_complexity Low_complexity 1 21 0 2 1188 21 57 0 0 chr15 79092197 79092232 -24402742 + GC_rich Low_complexity Low_complexity 1 35 0 2 1188 251 349 23 45 chr15 79092857 79092989 -24401985 + B4A SINE B4 142 270 -22 2 1188 537 316 19 12 chr15 79093675 79093835 -24401139 + ID_B1 SINE B4 2 162 -62 2 1188 499 227 27 18 chr15 79093824 79093936 -24401038 + B1F2 SINE Alu 12 124 -25 2 1188 252 284 88 72 chr15 79094173 79094237 -24400737 + B4A SINE B4 152 214 -78 2 1188 2537 123 31 10 chr15 79094237 79094623 -24400351 + ORR1B1 LTR MaLR 1 394 0 2 1188 252 284 88 72 chr15 79094623 79094683 -24400291 + B4A SINE B4 215 278 -14 2 1188 3276 123 90 55 chr15 79094683 79095303 -24399671 + RLTR26 LTR ERVK 1 642 0 2 1188 850 64 34 28 chr15 79095947 79096125 -24398849 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 1188 335 292 19 0 chr15 79097741 79097847 -24397127 + RNERVK23-int LTR ERVK 7423 7530 -687 2 1188 235 287 78 9 chr15 79098398 79098514 -24396460 + L1M5 LINE L1 5346 5469 -705 2 1188 1852 128 78 9 chr15 79098520 79098851 -24396123 + ORR1B1 LTR MaLR 41 394 0 2 1188 326 255 148 5 chr15 79098851 79099040 -24395934 + L1M5 LINE L1 5464 5679 -500 2 1188 262 312 76 0 chr15 79099135 79099279 -24395695 + L1MB8 LINE L1 5878 6032 -146 2 1188 1477 120 18 18 chr15 79099541 79099762 -24395212 - URR1B DNA MER1_type 0 225 5 2 1188 785 299 9 35 chr15 79099830 79100059 -24394915 + ID_B1 SINE B4 2 224 0 2 1188 246 174 0 0 chr15 79100106 79100152 -24394822 + (CAT)n Simple_repeat Simple_repeat 2 47 0 2 1188 297 0 0 0 chr15 79100287 79100320 -24394654 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1188 333 0 0 0 chr15 79100320 79100356 -24394618 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 1188 283 281 30 40 chr15 79100617 79100717 -24394257 + RSINE1 SINE B4 26 124 -41 2 1188 510 125 0 0 chr15 79102158 79102238 -24392736 + (TG)n Simple_repeat Simple_repeat 1 80 0 2 1188 395 107 0 0 chr15 79102778 79102834 -24392140 - B2_Mm2 SINE B2 -131 64 9 2 1188 929 47 0 30 chr15 79102827 79102959 -24392015 + B1_Mus2 SINE Alu 20 147 0 2 1188 446 49 16 0 chr15 79102959 79103020 -24391954 + (GAAAA)n Simple_repeat Simple_repeat 3 64 0 2 1188 267 351 37 0 chr15 79103128 79103262 -24391712 - Tigger9a DNA Tigger -21 711 573 2 1188 216 97 0 0 chr15 79103837 79103868 -24391106 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1188 251 93 0 23 chr15 79103863 79103907 -24391067 + (CACAC)n Simple_repeat Simple_repeat 1 43 0 2 1188 280 172 35 0 chr15 79104112 79104170 -24390804 - ID4 SINE ID -20 63 4 2 1188 1192 149 118 10 chr15 79104571 79104775 -24390199 + URR1A DNA MER1_type 1 226 0 2 1188 215 339 104 46 chr15 79104787 79105047 -24389927 + L2 LINE L2 2553 2827 -592 2 1188 1130 69 28 0 chr15 79105073 79105217 -24389757 - B1_Mus1 SINE Alu 0 148 1 2 1188 639 216 0 0 chr15 79105225 79105336 -24389638 - PB1D10 SINE Alu -6 111 1 2 1188 1651 47 0 0 chr15 79105367 79105560 -24389414 + B2_Mm1a SINE B2 1 193 0 2 1188 588 264 90 64 chr15 79105633 79105900 -24389074 + B4 SINE B4 1 274 -18 2 1188 348 326 62 0 chr15 79106140 79106318 -24388656 + L1M5 LINE L1 4584 4772 -1374 2 1188 279 243 0 0 chr15 79106345 79106419 -24388555 + (CAGAGA)n Simple_repeat Simple_repeat 2 75 0 2 1188 342 0 0 0 chr15 79106517 79106555 -24388419 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1188 566 252 0 54 chr15 79106739 79106886 -24388088 + B3 SINE B2 3 141 -75 2 1188 741 182 22 7 chr15 79106875 79107013 -24387961 - B1_Mur1 SINE Alu 0 149 10 2 1188 740 233 198 11 chr15 79107031 79107213 -24387761 + B3 SINE B2 1 216 0 2 1188 2285 196 40 38 chr15 79107226 79107724 -24387250 + Lx9 LINE L1 6682 7180 -464 2 1188 427 55 0 0 chr15 79107724 79107779 -24387195 - ORR1A1 LTR MaLR 0 346 292 2 1188 1257 55 0 0 chr15 79107790 79107936 -24387038 - B1_Mus2 SINE Alu 0 147 2 2 1188 195 62 39 59 chr15 79108050 79108101 -24386873 + A-rich Low_complexity Low_complexity 3 52 0 2 1188 302 337 38 105 chr15 79108620 79108794 -24386180 + L1MC4 LINE L1 1156 1322 -4893 2 1188 885 183 192 11 chr15 79108794 79108976 -24385998 + B3 SINE B2 2 216 0 2 1188 302 337 38 105 chr15 79108976 79109010 -24385964 + L1MC4 LINE L1 1323 1350 -4865 2 1188 203 0 0 36 chr15 79109093 79109121 -24385853 + (AGGGGG)n Simple_repeat Simple_repeat 2 28 0 2 1188 389 221 124 16 chr15 79109125 79109254 -24385720 + B4A SINE B4 124 266 -26 2 1188 722 227 87 39 chr15 79109303 79109383 -24385591 + B3 SINE B2 1 73 -143 2 1188 1303 34 0 0 chr15 79109383 79109531 -24385443 + B1_Mus1 SINE Alu 1 148 0 2 1188 722 227 87 39 chr15 79109531 79109656 -24385318 + B3 SINE B2 74 215 -1 2 1188 552 171 44 0 chr15 79109674 79109813 -24385161 + B3 SINE B2 1 216 0 2 1188 882 289 50 4 chr15 79109855 79110095 -24384879 + B4A SINE B4 30 280 -12 2 1188 180 0 0 0 chr15 79110131 79110151 -24384823 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2 1188 719 259 16 30 chr15 79110407 79110602 -24384372 + B3A SINE B2 22 198 0 2 1188 474 224 37 9 chr15 79110608 79110716 -24384258 + B1_Mur1 SINE Alu 37 147 -2 2 1188 570 243 43 0 chr15 79110715 79110855 -24384119 + B3A SINE B2 11 156 -42 2 1188 1015 242 9 14 chr15 79112155 79112373 -24382601 - ID_B1 SINE B4 -6 218 2 2 1188 1161 105 52 6 chr15 79112471 79112644 -24382330 + B2_Mm1a SINE B2 1 181 -12 2 1188 330 129 0 47 chr15 79112693 79112812 -24382162 + B2_Mm2 SINE B2 47 195 0 2 1188 251 307 0 39 chr15 79112824 79112902 -24382072 - MIRc SINE MIR -168 100 26 2 1188 926 262 106 37 chr15 79113515 79113788 -24381186 - B4A SINE B4 0 292 1 2 1188 513 178 16 56 chr15 79114226 79114351 -24380623 + PB1D9 SINE Alu 1 120 0 2 1188 257 374 48 12 chr15 79115465 79115630 -24379344 + MIRb SINE MIR 3 173 -95 2 1188 318 275 0 0 chr15 79116365 79116434 -24378540 - ID4_ SINE ID -10 73 5 2 1188 220 221 130 14 chr15 79117667 79117736 -24377238 + MIRc SINE MIR 52 128 -140 2 1188 223 178 0 0 chr15 79118321 79118366 -24376608 + GA-rich Low_complexity Low_complexity 1 45 0 2 1188 1095 92 0 0 chr15 79118374 79118604 -24376370 + (CAG)n Simple_repeat Simple_repeat 1 230 0 2 1188 995 228 20 0 chr15 79120844 79121046 -24373928 + B3 SINE B2 9 214 -2 2 1188 304 167 33 0 chr15 79121219 79121279 -24373695 - B3 SINE B2 -154 62 1 2 1188 811 170 0 7 chr15 79121309 79121451 -24373523 - B1_Mus2 SINE Alu 0 147 7 2 1188 410 220 30 106 chr15 79121345 79121477 -24373497 - MT2B LTR ERVL -337 264 143 2 1188 1246 14 0 0 chr15 79121549 79121687 -24373287 + B1_Mus2 SINE Alu 1 138 -9 2 1188 211 28 27 27 chr15 79121700 79121737 -24373237 + (CAAAAA)n Simple_repeat Simple_repeat 3 39 0 2 1188 552 242 186 0 chr15 79121785 79121946 -24373028 + B3A SINE B2 8 198 0 2 1188 634 229 35 0 chr15 79122103 79122247 -24372727 - B3 SINE B2 -67 149 1 2 1188 341 300 32 40 chr15 79122802 79122902 -24372072 + L1MEg LINE L1 853 953 -5131 2 1188 1131 95 0 0 chr15 79122902 79123049 -24371925 + B1_Mus2 SINE Alu 1 147 0 2 1188 341 300 32 40 chr15 79123049 79123073 -24371901 + L1MEg LINE L1 954 976 -5108 2 1188 294 304 80 0 chr15 79123092 79123204 -24371770 + RSINE1 SINE B4 3 123 -42 2 1188 413 167 0 82 chr15 79123830 79124000 -24370974 + (CATA)n Simple_repeat Simple_repeat 4 159 0 2 1188 221 302 0 0 chr15 79124003 79124056 -24370918 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1188 1213 55 7 0 chr15 79124120 79124266 -24370708 + B1_Mus1 SINE Alu 2 148 0 2 1188 27 0 0 0 chr15 79124266 79124293 -24370681 + AT_rich Low_complexity Low_complexity 1 27 0 2 1188 515 249 78 52 chr15 79124293 79124484 -24370490 + B3A SINE B2 2 197 -1 2 1188 280 229 86 0 chr15 79124536 79124606 -24370368 + MER63B DNA AcHobo 312 387 -49 2 1188 337 237 13 13 chr15 79124728 79124805 -24370169 + ID4_ SINE ID 3 79 -4 2 1188 566 205 147 6 chr15 79124867 79124900 -24370074 + ORR1D1 LTR MaLR 196 228 -146 2 1188 288 0 0 0 chr15 79124900 79124932 -24370042 + (CCTG)n Simple_repeat Simple_repeat 3 34 0 2 1188 566 205 147 6 chr15 79124932 79125055 -24369919 + ORR1D1 LTR MaLR 229 373 -1 2 1188 249 109 0 0 chr15 79125106 79125152 -24369822 + (C)n Simple_repeat Simple_repeat 1 46 0 2 1188 2590 308 56 13 chr15 79125152 79126221 -24368753 - L1M2 LINE L1 -973 5170 4056 2 1188 340 229 9 95 chr15 79126476 79126492 -24368482 + MT2B LTR ERVL 152 157 -444 3 1188 620 204 34 27 chr15 79126492 79126638 -24368336 + B1_Mus2 SINE Alu 1 147 -2 3 1188 390 317 88 36 chr15 79126655 79126914 -24368060 + L1_Mur3 LINE L1 2207 2483 -3397 3 1188 1381 83 5 25 chr15 79126914 79127111 -24367863 + B2_Mm1a SINE B2 1 193 0 3 1188 390 317 88 36 chr15 79127111 79127182 -24367792 + L1_Mur3 LINE L1 2484 2554 -3326 3 1188 1183 76 0 0 chr15 79127183 79127328 -24367646 + B1_Mm SINE Alu 1 145 -2 3 1188 340 273 57 8 chr15 79130203 79130235 -24364739 - RMER30 DNA MER1_type -67 135 104 3 1188 279 0 0 0 chr15 79130235 79130266 -24364708 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1188 342 0 0 0 chr15 79130266 79130303 -24364671 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 1188 340 273 57 8 chr15 79130303 79130391 -24364583 - RMER30 DNA MER1_type -99 103 9 3 1188 789 335 39 36 chr15 79130602 79130796 -24364178 + MTE2a LTR MaLR 1 190 -189 3 1188 222 118 0 0 chr15 79130796 79130830 -24364144 + (CAAG)n Simple_repeat Simple_repeat 1 34 0 3 1188 789 335 39 36 chr15 79130830 79130969 -24364005 + MTE2a LTR MaLR 191 335 -44 3 1188 252 0 0 0 chr15 79132142 79132170 -24362804 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1188 1557 58 16 0 chr15 79135200 79135389 -24359585 + B2_Mm2 SINE B2 4 195 0 3 1188 433 93 26 13 chr15 79135536 79135612 -24359362 + (GGGGA)n Simple_repeat Simple_repeat 2 78 0 3 1188 398 290 37 18 chr15 79138119 79138228 -24356746 + PB1D7 SINE Alu 2 112 -8 3 1188 461 195 166 13 chr15 79138281 79138432 -24356542 + L1M3 LINE L1 5339 5512 -677 3 1188 717 44 0 0 chr15 79139432 79139523 -24355451 + MTA_Mm LTR MaLR 306 396 0 3 1188 9785 16 1 4 chr15 79139523 79140624 -24354350 + MTA_Mm-int LTR MaLR 1 1098 0 3 1188 3437 28 13 0 chr15 79140624 79141015 -24353959 + MTA_Mm LTR MaLR 1 396 0 3 1188 1745 185 115 48 chr15 79141046 79141827 -24353147 + RMER19B LTR ERVK 211 902 0 3 1188 618 152 1 3 chr15 79142760 79142878 -24352096 - B1_Mus1 SINE Alu 0 117 1 3 1188 204 196 0 35 chr15 79143320 79143378 -24351596 + C-rich Low_complexity Low_complexity 5 60 0 3 1188 389 296 144 0 chr15 79144034 79144159 -24350815 + RSINE1 SINE B4 3 145 -20 3 1188 268 309 26 2 chr15 79144390 79144501 -24350473 + MIR SINE MIR 17 129 -147 3 1188 236 139 47 0 chr15 79144812 79144855 -24350119 + ID_B1 SINE B4 173 217 -7 3 1188 413 287 101 0 chr15 79145105 79145234 -24349740 + B1F SINE Alu 2 143 -6 3 1188 396 262 117 0 chr15 79145253 79145356 -24349618 + RSINE1 SINE B4 4 118 -47 3 1188 303 28 0 0 chr15 79145357 79145393 -24349581 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1188 22 56 0 0 chr15 79145395 79145431 -24349543 + AT_rich Low_complexity Low_complexity 1 36 0 3 1188 367 279 0 0 chr15 79145449 79145528 -24349446 - RSINE1 SINE B4 -84 81 3 3 1188 381 308 54 0 chr15 79145890 79146020 -24348954 + MLT1G1 LTR MaLR 429 565 -14 3 1188 406 209 43 102 chr15 79146386 79146546 -24348428 + B3A SINE B2 57 198 -18 3 1188 824 201 14 0 chr15 79146546 79146690 -24348284 + B1_Mur2 SINE Alu 3 148 -1 3 1188 301 253 33 154 chr15 79146690 79146711 -24348263 + B3 SINE B2 199 216 0 3 1188 358 244 39 0 chr15 79146792 79146870 -24348104 + B3 SINE B2 136 216 0 3 1188 1232 41 0 0 chr15 79147305 79147452 -24347522 + B1_Mus1 SINE Alu 2 148 0 3 1188 197 77 0 49 chr15 79147454 79147495 -24347479 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1188 507 33 0 0 chr15 79148502 79148563 -24346411 + (CA)n Simple_repeat Simple_repeat 1 61 0 3 1188 833 254 127 15 chr15 79149382 79149642 -24345332 - B4 SINE B4 0 292 4 3 1188 207 0 0 0 chr15 79149670 79149693 -24345281 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 1188 320 367 108 22 chr15 79150123 79150346 -24344628 + MER44B DNA MER2_type 22 263 -287 3 1188 346 260 126 31 chr15 79150400 79150559 -24344415 + ID_B1 SINE B4 30 203 -21 3 1188 222 174 0 10 chr15 79150590 79150640 -24344334 - MIR SINE MIR -105 157 110 3 1188 382 285 146 0 chr15 79150751 79150881 -24344093 + B1F1 SINE Alu 1 149 0 3 1188 1028 248 5 18 chr15 79150883 79151101 -24343873 + B3 SINE B2 2 216 0 3 1188 796 161 0 153 chr15 79151311 79151398 -24343576 + B1_Mur2 SINE Alu 1 75 -74 3 1188 1428 63 31 16 chr15 79151398 79151590 -24343384 + B2_Mm2 SINE B2 1 195 0 3 1188 796 161 0 153 chr15 79151590 79151678 -24343296 + B1_Mur2 SINE Alu 76 149 0 3 1188 551 285 33 13 chr15 79151792 79151945 -24343029 + RSINE1 SINE B4 9 164 -1 3 1188 2316 138 67 33 chr15 79152150 79152623 -24342351 + RLTR11A LTR ERVK 1 514 -14 3 1188 435 238 0 0 chr15 79152712 79152792 -24342182 - RSINE1 SINE B4 -74 91 12 3 1188 291 264 52 43 chr15 79152821 79152936 -24342038 + PB1D7 SINE Alu 5 120 0 3 1188 261 0 0 0 chr15 79153001 79153030 -24341944 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1188 298 275 294 27 chr15 79153033 79153179 -24341795 - B4 SINE B4 -14 278 94 3 1188 290 357 22 13 chr15 79153311 79153476 -24341498 - MIR SINE MIR -73 195 20 3 1188 198 308 30 15 chr15 79155734 79155800 -24339174 + L2c LINE L2 3100 3166 -221 3 1188 501 17 0 0 chr15 79156540 79156598 -24338376 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 1188 528 258 128 84 chr15 79156962 79157066 -24337908 + B3 SINE B2 4 102 -114 3 1188 1459 61 6 6 chr15 79157066 79157247 -24337727 - B2_Mm2 SINE B2 -14 181 1 3 1188 528 258 128 84 chr15 79157247 79157345 -24337629 + B3 SINE B2 103 215 -1 3 1188 21 0 0 0 chr15 79158610 79158631 -24336343 + GC_rich Low_complexity Low_complexity 1 21 0 3 1188 234 0 0 0 chr15 79159298 79159324 -24335650 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1188 753 280 62 0 chr15 79159324 79159535 -24335439 - B4A SINE B4 -68 224 1 3 1188 212 319 183 8 chr15 79159608 79159728 -24335246 + ID_B1 SINE B4 84 224 0 3 1188 1087 137 11 11 chr15 79159906 79160083 -24334891 + B2_Mm2 SINE B2 1 177 -18 3 1188 473 115 13 0 chr15 79160085 79160163 -24334811 + (TAAA)n Simple_repeat Simple_repeat 4 82 0 3 1188 1496 68 16 5 chr15 79160307 79160500 -24334474 - B2_Mm2 SINE B2 0 195 1 3 1188 457 252 26 18 chr15 79160667 79160780 -24334194 + PB1D10 SINE Alu 2 115 -2 3 1188 807 83 233 0 chr15 79160869 79160989 -24333985 - B1_Mus1 SINE Alu 0 148 1 3 1188 1533 119 76 3 chr15 79160993 79161354 -24333620 + ORR1A4 LTR MaLR 1 344 -50 3 1188 1126 95 0 0 chr15 79161589 79161736 -24333238 + B1_Mus1 SINE Alu 2 148 0 3 1188 222 37 0 0 chr15 79161738 79161765 -24333209 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1188 545 158 105 0 chr15 79161852 79161947 -24333027 + PB1D9 SINE Alu 1 105 -15 3 1188 1306 107 37 5 chr15 79162008 79162196 -24332778 - B2_Mm2 SINE B2 0 195 2 3 1188 350 257 144 50 chr15 79162365 79162545 -24332429 + B3A SINE B2 2 198 0 3 1188 925 167 32 48 chr15 79162569 79162758 -24332216 + B2_Mm2 SINE B2 1 186 -9 3 1188 1218 49 0 0 chr15 79163120 79163262 -24331712 + B1_Mus1 SINE Alu 1 142 -6 3 1188 315 0 0 0 chr15 79163264 79163299 -24331675 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 3 1188 891 179 25 62 chr15 79163299 79163724 -24331250 - RMER10A LTR ERVL -3 439 52 3 1188 304 293 40 10 chr15 79164443 79164543 -24330431 + PB1D9 SINE Alu 1 103 -17 3 1188 246 354 0 24 chr15 79164681 79164765 -24330209 - ID4 SINE ID 0 83 2 3 1188 407 292 63 19 chr15 79164778 79164984 -24329990 - L2a LINE L2 -268 3158 2944 3 1188 333 118 0 0 chr15 79164984 79165035 -24329939 + (TGG)n Simple_repeat Simple_repeat 1 51 0 3 1188 189 147 0 0 chr15 79165033 79165067 -24329907 + (GGA)n Simple_repeat Simple_repeat 1 34 0 3 1188 310 370 70 21 chr15 79165068 79165311 -24329663 - L2 LINE L2 -437 2982 2728 3 1188 1693 132 3 47 chr15 79166379 79166632 -24328342 - RLTR15 LTR ERVK -56 303 61 3 1188 1217 103 97 0 chr15 79166632 79166807 -24328167 - B2_Mm2 SINE B2 -2 193 2 3 1188 1693 132 3 47 chr15 79166807 79166870 -24328104 - RLTR15 LTR ERVK -299 60 1 3 1188 630 133 26 34 chr15 79166873 79166990 -24327984 - B1_Mus1 SINE Alu -31 117 2 3 1188 342 67 0 0 chr15 79167112 79167157 -24327817 + (CTG)n Simple_repeat Simple_repeat 3 47 0 3 1188 297 0 0 0 chr15 79167267 79167300 -24327674 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1189 233 209 14 29 chr15 79167518 79167587 -24327387 - B4 SINE B4 -224 68 1 3 1189 236 290 58 106 chr15 79167642 79167657 -24327317 + B4 SINE B4 80 89 -203 3 1189 485 292 0 32 chr15 79167657 79167781 -24327193 + PB1D7 SINE Alu 1 120 0 3 1189 183 80 0 0 chr15 79167965 79167990 -24326984 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1189 1543 38 27 0 chr15 79168010 79168193 -24326781 - B2_Mm1a SINE B2 -5 188 1 3 1189 537 203 119 0 chr15 79168312 79168430 -24326544 + B1F SINE Alu 2 133 -16 3 1189 242 333 36 0 chr15 79168435 79168519 -24326455 + GA-rich Low_complexity Low_complexity 5 91 0 3 1189 676 157 11 98 chr15 79170731 79170927 -24324047 + ORR1A4 LTR MaLR 34 229 -117 3 1189 1102 207 14 22 chr15 79171198 79171420 -24323554 + ID_B1 SINE B4 3 222 -2 3 1189 396 0 0 0 chr15 79171420 79171464 -24323510 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1189 1143 65 0 0 chr15 79171632 79171770 -24323204 + B1_Mus1 SINE Alu 1 138 -10 3 1189 576 0 0 0 chr15 79171771 79171835 -24323139 + (CAAAA)n Simple_repeat Simple_repeat 3 66 0 3 1189 720 290 45 118 chr15 79171962 79172152 -24322822 + MER44A DNA MER2_type 11 191 -148 3 1189 1000 153 53 37 chr15 79172152 79172342 -24322632 - B3A SINE B2 -5 193 1 3 1189 720 290 45 118 chr15 79172342 79172464 -24322510 + MER44A DNA MER2_type 192 300 -39 3 1189 312 140 35 0 chr15 79172770 79172827 -24322147 + B3 SINE B2 1 59 -157 3 1189 1053 178 74 5 chr15 79172825 79172975 -24321999 + ID_B1 SINE B4 7 171 -53 3 1189 258 32 0 0 chr15 79172975 79173006 -24321968 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1189 1053 178 74 5 chr15 79173006 79173058 -24321916 + ID_B1 SINE B4 172 223 -1 3 1189 588 344 56 12 chr15 79174067 79174366 -24320608 - MLT1B LTR MaLR 0 467 84 4 1189 394 255 124 47 chr15 79174382 79174480 -24320494 + B3 SINE B2 30 138 -78 4 1189 3370 43 5 0 chr15 79174480 79174874 -24320100 + MTA_Mm LTR MaLR 1 396 0 4 1189 394 255 124 47 chr15 79174874 79174944 -24320030 + B3 SINE B2 139 211 -5 4 1189 394 223 29 0 chr15 79175105 79175208 -24319766 - L1MC4 LINE L1 -642 7400 7295 4 1189 491 246 17 17 chr15 79175218 79175338 -24319636 + RSINE1 SINE B4 5 124 -41 4 1189 258 32 0 0 chr15 79175345 79175376 -24319598 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 1189 24 32 0 0 chr15 79175381 79175412 -24319562 + AT_rich Low_complexity Low_complexity 1 31 0 4 1189 569 256 62 77 chr15 79175472 79175667 -24319307 - B3A SINE B2 -4 194 3 4 1189 21 0 0 0 chr15 79175676 79175697 -24319277 + AT_rich Low_complexity Low_complexity 1 21 0 4 1189 345 376 6 25 chr15 79175706 79175867 -24319107 - HAL1-3A_ME LINE L1 -726 2132 1975 4 1189 319 167 36 18 chr15 79175869 79175979 -24318995 + (TATG)n Simple_repeat Simple_repeat 3 114 0 4 1189 409 255 65 89 chr15 79175979 79176147 -24318827 - RSINE1 SINE B4 0 165 2 4 1189 600 14 0 0 chr15 79176276 79176345 -24318629 + (GGA)n Simple_repeat Simple_repeat 3 71 0 4 1189 201 147 0 0 chr15 79176346 79176380 -24318594 + (GAAAA)n Simple_repeat Simple_repeat 3 36 0 4 1189 226 306 0 0 chr15 79176437 79176499 -24318475 - L1MC4 LINE L1 -1036 7006 6945 4 1189 198 213 21 0 chr15 79177153 79177200 -24317774 - MIR SINE MIR -12 250 203 4 1189 405 282 13 60 chr15 79177350 79177501 -24317473 - RSINE1 SINE B4 0 165 22 4 1189 348 339 8 0 chr15 79177593 79177717 -24317257 - L2 LINE L2 -1065 2354 2230 4 1189 189 0 0 0 chr15 79178350 79178371 -24316603 + (CGGGGG)n Simple_repeat Simple_repeat 3 23 0 4 1189 749 210 109 16 chr15 79179857 79180041 -24314933 - B3 SINE B2 -10 206 6 4 1189 287 280 20 51 chr15 79180435 79180533 -24314441 + L2b LINE L2 3279 3373 -2 4 1189 781 104 16 50 chr15 79180898 79181019 -24313955 + PB1D9 SINE Alu 2 118 -2 4 1189 561 302 46 6 chr15 79181065 79181238 -24313736 - B3A SINE B2 -17 181 2 4 1189 328 262 45 36 chr15 79181259 79181370 -24313604 - PB1D10 SINE Alu -1 116 5 4 1189 264 302 24 57 chr15 79181755 79181878 -24313096 - MIR3 SINE MIR -79 129 11 4 1189 855 116 92 8 chr15 79183266 79183396 -24311578 + B1_Mus1 SINE Alu 1 141 -7 4 1189 239 257 100 0 chr15 79184590 79184660 -24310314 + ID_B1 SINE B4 85 161 -63 4 1189 443 232 143 0 chr15 79184763 79184875 -24310099 - B1F SINE Alu 0 149 22 4 1189 298 283 0 117 chr15 79184926 79185054 -24309920 - PB1D10 SINE Alu 0 117 5 4 1189 214 343 65 0 chr15 79185262 79185370 -24309604 - L2a LINE L2 -25 3401 3287 4 1189 1367 71 16 21 chr15 79185509 79185697 -24309277 - B2_Mm2 SINE B2 -7 188 2 4 1189 273 260 25 38 chr15 79185720 79185800 -24309174 - B4 SINE B4 -173 119 41 4 1189 1383 68 23 0 chr15 79185908 79186084 -24308890 - B2_Mm2 SINE B2 -14 181 2 4 1189 237 233 0 48 chr15 79186092 79186155 -24308819 - B3 SINE B2 -11 205 146 4 1189 394 206 71 20 chr15 79186183 79186282 -24308692 - ID_B1 SINE B4 -28 196 93 4 1189 1303 158 9 5 chr15 79186458 79186681 -24308293 + URR1A DNA MER1_type 1 224 -2 4 1189 340 214 0 0 chr15 79186736 79186806 -24308168 + PB1D10 SINE Alu 48 117 0 4 1189 536 240 50 43 chr15 79186806 79186967 -24308007 + RSINE1 SINE B4 4 165 0 4 1189 24 0 0 0 chr15 79188176 79188200 -24306774 + GC_rich Low_complexity Low_complexity 1 24 0 4 1189 28 0 0 0 chr15 79189372 79189400 -24305574 + AT_rich Low_complexity Low_complexity 1 28 0 4 1189 1403 55 43 16 chr15 79189728 79189912 -24305062 - B2_Mm2 SINE B2 -6 189 1 4 1189 354 273 92 70 chr15 79190101 79190148 -24304826 + CYRA11_Mm Unknown Y-chromosome 131 181 -436 4 1189 968 136 147 0 chr15 79190148 79190325 -24304649 - URR1A DNA MER1_type 0 226 24 4 1189 21 0 0 0 chr15 79191337 79191358 -24303616 + AT_rich Low_complexity Low_complexity 1 21 0 4 1189 350 190 0 0 chr15 79195429 79195487 -24299487 - B1F SINE Alu -73 76 19 4 1189 232 286 0 0 chr15 79195443 79195492 -24299482 - ID_B1 SINE B4 -81 143 95 4 1189 1213 48 7 0 chr15 79197599 79197745 -24297229 - B1_Mus1 SINE Alu 0 148 2 4 1189 288 0 0 0 chr15 79198739 79198771 -24296203 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1189 410 335 40 7 chr15 79199515 79199665 -24295309 - MIRb SINE MIR -45 223 69 4 1189 502 267 29 2 chr15 79200533 79200697 -24294277 + MIR SINE MIR 2 172 -96 4 1189 473 217 78 0 chr15 79201371 79201486 -24293488 - RLTR11A LTR ERVK -4 524 401 4 1189 1801 164 63 8 chr15 79201471 79201822 -24293152 + RLTR11A LTR ERVK 159 528 0 4 1189 255 292 55 22 chr15 79202081 79202172 -24292802 + L3 LINE CR1 3922 4015 -474 4 1189 436 286 9 18 chr15 79202325 79202439 -24292535 - PB1D9 SINE Alu -7 113 1 4 1189 483 18 0 0 chr15 79203314 79203370 -24291604 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 1189 368 342 25 0 chr15 79203370 79203490 -24291484 - RSINE1 SINE B4 -41 124 2 4 1189 351 232 101 0 chr15 79203590 79203689 -24291285 + PB1D10 SINE Alu 2 110 -7 4 1189 251 167 18 53 chr15 79203638 79203695 -24291279 + ID_B1 SINE B4 169 223 -1 4 1189 394 321 138 35 chr15 79204330 79204765 -24290209 + HAL1 LINE L1 1397 1876 -631 4 1189 207 189 0 0 chr15 79205170 79205207 -24289767 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1189 492 68 0 0 chr15 79205516 79205589 -24289385 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 1189 396 0 0 0 chr15 79205899 79205943 -24289031 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1189 248 271 129 0 chr15 79205949 79206019 -24288955 + ID SINE ID 3 81 -143 4 1189 855 162 14 29 chr15 79206019 79206159 -24288815 + B1_Mur3 SINE Alu 1 138 -11 4 1189 605 149 321 31 chr15 79206181 79206340 -24288634 + B3 SINE B2 2 206 -10 4 1189 1181 62 7 0 chr15 79206372 79206517 -24288457 + B1_Mus1 SINE Alu 3 148 0 4 1189 344 281 0 0 chr15 79206551 79206633 -24288341 + PB1D9 SINE Alu 23 104 -16 4 1189 256 171 0 0 chr15 79206666 79206707 -24288267 + ID_B1 SINE B4 175 215 -9 4 1189 207 288 159 8 chr15 79207755 79207881 -24287093 + MIRb SINE MIR 68 212 -56 4 1189 1282 88 55 0 chr15 79209489 79209671 -24285303 - B2_Mm1a SINE B2 -1 192 1 4 1189 1140 74 0 13 chr15 79209803 79209953 -24285021 - B1_Mus1 SINE Alu 0 148 1 4 1189 643 235 239 0 chr15 79210764 79211011 -24283963 + MLT1A0 LTR MaLR 56 361 -4 4 1189 286 235 49 12 chr15 79212619 79212701 -24282273 - B4 SINE B4 -206 86 2 4 1189 439 157 47 35 chr15 79213154 79213240 -24281734 + RSINE1 SINE B4 3 89 -76 4 1189 198 0 0 0 chr15 79213259 79213281 -24281693 + (CAAT)n Simple_repeat Simple_repeat 4 25 0 4 1189 296 115 0 47 chr15 79213288 79213352 -24281622 + CT-rich Low_complexity Low_complexity 2 62 0 4 1189 462 36 0 0 chr15 79213352 79213408 -24281566 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 1189 22 0 0 0 chr15 79213421 79213443 -24281531 + AT_rich Low_complexity Low_complexity 1 22 0 4 1189 189 0 0 0 chr15 79213834 79213855 -24281119 + (CTG)n Simple_repeat Simple_repeat 3 23 0 4 1189 274 267 0 0 chr15 79213855 79213915 -24281059 - PB1D9 SINE Alu -16 104 45 4 1189 296 278 124 2 chr15 79214075 79214255 -24280719 + L1MD2 LINE L1 5398 5601 -758 4 1189 293 282 136 0 chr15 79214258 79214361 -24280613 + PB1 SINE Alu 1 117 -32 4 1189 970 264 52 33 chr15 79214357 79214662 -24280312 + MTE2a LTR MaLR 17 327 -52 4 1189 241 298 32 11 chr15 79214662 79214757 -24280217 + L1MD2 LINE L1 5725 5821 -538 4 1189 804 172 0 58 chr15 79214765 79214919 -24280055 + B1_Mm SINE Alu 3 147 0 4 1189 237 33 0 0 chr15 79214922 79214952 -24280022 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 1189 921 221 142 0 chr15 79214960 79215186 -24279788 + Lx9 LINE L1 6407 6664 -980 4 1189 863 141 12 66 chr15 79215191 79215358 -24279616 + B2_Mm2 SINE B2 1 158 -37 4 1189 243 0 0 0 chr15 79215360 79215387 -24279587 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1189 1017 127 12 0 chr15 79215387 79215552 -24279422 - B2_Mm2 SINE B2 -27 168 2 4 1189 905 213 11 16 chr15 79215577 79215768 -24279206 + Lx9 LINE L1 6659 6848 -796 4 1189 326 275 75 0 chr15 79215799 79215919 -24279055 + L1MD2 LINE L1 5833 5961 -398 4 1189 838 227 75 25 chr15 79216284 79216483 -24278491 - B3 SINE B2 -5 211 3 4 1189 592 226 316 0 chr15 79216638 79216806 -24278168 + ID_B1 SINE B4 4 224 0 4 1189 316 312 63 99 chr15 79217305 79217417 -24277557 + Charlie7 DNA MER1_type 1862 1964 -648 4 1189 1240 48 0 0 chr15 79217417 79217564 -24277410 + B1_Mus2 SINE Alu 1 147 0 4 1189 219 36 0 0 chr15 79217573 79217601 -24277373 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 4 1189 316 312 63 99 chr15 79217601 79217762 -24277212 + Charlie7 DNA MER1_type 1972 2135 -477 4 1189 435 258 185 29 chr15 79218128 79218365 -24276609 - B4A SINE B4 -8 284 11 4 1189 655 281 135 0 chr15 79218903 79219095 -24275879 + ID_B1 SINE B4 2 219 -5 4 1189 418 341 28 28 chr15 79219113 79219330 -24275644 - MER46C DNA MER2_type -75 263 47 4 1189 272 322 33 0 chr15 79221006 79221096 -24273878 + MIR SINE MIR 28 120 -142 4 1189 265 243 44 26 chr15 79221304 79221418 -24273556 + (TG)n Simple_repeat Simple_repeat 1 116 0 4 1189 201 218 29 41 chr15 79221422 79221594 -24273380 + (TATG)n Simple_repeat Simple_repeat 2 171 0 4 1189 401 274 86 63 chr15 79221666 79221841 -24273133 - B4A SINE B4 -113 179 1 5 1189 549 198 57 0 chr15 79221863 79221969 -24273005 - PB1D7 SINE Alu -7 113 2 5 1189 1139 187 14 19 chr15 79222698 79222911 -24272063 - B3 SINE B2 -3 213 2 5 1189 343 230 292 0 chr15 79222938 79223051 -24271923 - B1_Mur1 SINE Alu -1 148 3 5 1189 219 326 11 11 chr15 79224947 79225040 -24269934 + BC1_Mm scRNA scRNA 2 94 -58 5 1189 216 0 0 0 chr15 79225615 79225639 -24269335 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1189 181 308 108 0 chr15 79226114 79226179 -24268795 + MIRm SINE MIR 84 155 -121 5 1189 353 245 131 10 chr15 79227511 79227610 -24267364 + PB1D10 SINE Alu 1 111 -6 5 1189 668 250 28 0 chr15 79227615 79227759 -24267215 + B1_Mur1 SINE Alu 1 148 -1 5 1189 704 229 28 0 chr15 79227789 79227933 -24267041 + B1_Mur2 SINE Alu 2 149 0 5 1189 414 217 0 109 chr15 79228264 79228383 -24266591 + MT2B LTR ERVL 159 264 -337 5 1189 938 62 15 0 chr15 79228286 79228416 -24266558 + B1_Mm SINE Alu 16 147 0 5 1189 186 133 0 0 chr15 79228416 79228446 -24266528 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1189 881 152 92 12 chr15 79228448 79228621 -24266353 + B3 SINE B2 30 216 0 5 1189 916 269 54 32 chr15 79229003 79229283 -24265691 + B4 SINE B4 7 292 0 5 1189 187 350 0 16 chr15 79229292 79229353 -24265621 - MIR SINE MIR -82 180 121 5 1189 216 0 0 0 chr15 79229458 79229482 -24265492 + (TCTA)n Simple_repeat Simple_repeat 4 27 0 5 1189 764 125 116 8 chr15 79229489 79229618 -24265356 - B1_Mur2 SINE Alu -6 143 1 5 1189 636 246 14 7 chr15 79229751 79229890 -24265084 - RSINE1 SINE B4 -23 142 3 5 1189 635 243 40 0 chr15 79230389 79230537 -24264437 + ID_B1 SINE B4 70 223 -1 5 1189 350 257 71 0 chr15 79231017 79231130 -24263844 + MIR SINE MIR 128 248 -14 5 1189 333 68 0 0 chr15 79232378 79232422 -24262552 + (T)n Simple_repeat Simple_repeat 1 44 0 5 1189 288 0 0 0 chr15 79232792 79232824 -24262150 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 1189 208 319 210 25 chr15 79234258 79234615 -24260359 + L2a LINE L2 2388 2810 -609 5 1189 289 283 108 29 chr15 79234724 79234952 -24260022 + L2a LINE L2 2833 3088 -338 5 1189 290 250 93 28 chr15 79235186 79235293 -24259681 - RMER15 LTR ERVL -45 530 417 5 1189 395 320 63 44 chr15 79235433 79235471 -24259503 + RMER15 LTR ERVL 352 392 -183 5 1189 186 43 0 0 chr15 79235471 79235494 -24259480 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1189 395 320 63 44 chr15 79235494 79235661 -24259313 + RMER15 LTR ERVL 393 561 -14 5 1189 261 0 0 0 chr15 79235898 79235927 -24259047 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1189 287 212 50 126 chr15 79235963 79236082 -24258892 + MT2B LTR ERVL 169 278 -323 5 1189 618 227 0 23 chr15 79235977 79236108 -24258866 + B1_Mur1 SINE Alu 21 148 -1 5 1189 920 153 0 0 chr15 79236114 79236245 -24258729 + B1_Mur4 SINE Alu 5 135 -15 5 1189 269 109 0 18 chr15 79236305 79236361 -24258613 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 5 1189 1044 79 50 0 chr15 79236363 79236502 -24258472 - B1_Mus1 SINE Alu -1 147 2 5 1189 2788 84 63 8 chr15 79236504 79236886 -24258088 - MTB_Mm LTR MaLR -4 403 1 5 1189 311 280 43 11 chr15 79237282 79237376 -24257598 + RSINE1 SINE B4 3 99 -66 5 1189 251 227 86 12 chr15 79237673 79237785 -24257189 - BC1_Mm scRNA scRNA -30 122 4 5 1189 296 212 46 73 chr15 79237804 79237922 -24257052 - B1F1 SINE Alu -2 147 21 5 1189 330 26 0 0 chr15 79238023 79238062 -24256912 + (TC)n Simple_repeat Simple_repeat 1 39 0 5 1189 419 163 522 7 chr15 79238065 79238201 -24256773 - B3 SINE B2 -10 206 1 5 1189 186 133 0 0 chr15 79238217 79238247 -24256727 + (TATG)n Simple_repeat Simple_repeat 1 30 0 5 1189 1407 87 27 0 chr15 79238296 79238481 -24256493 + B2_Mm2 SINE B2 3 192 -3 5 1189 317 210 77 39 chr15 79238677 79238781 -24256193 + L1ME4a LINE L1 6001 6108 -16 5 1189 231 308 0 0 chr15 79239189 79239254 -24255720 + MIRc SINE MIR 75 139 -129 5 1189 423 0 0 0 chr15 79239508 79239555 -24255419 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1189 391 331 108 8 chr15 79239593 79239843 -24255131 - MLT1K LTR MaLR -296 299 25 5 1189 298 302 12 0 chr15 79240098 79240176 -24254798 + ID_B1 SINE B4 133 211 -13 5 1189 250 0 0 91 chr15 79240176 79240220 -24254754 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 5 1189 662 225 35 21 chr15 79240227 79240368 -24254606 + B1F SINE Alu 1 143 -6 5 1189 296 221 96 0 chr15 79240372 79240444 -24254530 + RSINE1 SINE B4 1 78 -214 5 1189 477 0 0 0 chr15 79240444 79240497 -24254477 + (GA)n Simple_repeat Simple_repeat 2 54 0 5 1189 719 164 82 7 chr15 79240526 79240661 -24254313 - B1_Mur4 SINE Alu -5 145 1 5 1189 1183 82 0 0 chr15 79240671 79240818 -24254156 - B1_Mus1 SINE Alu 0 148 2 5 1189 415 217 3 23 chr15 79240939 79241041 -24253933 + B1_Mur4 SINE Alu 17 118 -2 5 1189 434 225 0 123 chr15 79241042 79241204 -24253770 - B3A SINE B2 -2 196 55 5 1189 332 180 49 0 chr15 79241179 79241240 -24253734 - B3A SINE B2 -36 162 99 5 1189 1107 100 6 0 chr15 79241448 79241608 -24253366 - B2_Mm2 SINE B2 -30 165 5 5 1189 742 234 106 42 chr15 79241977 79242213 -24252761 + MTEa LTR MaLR 120 370 -9 5 1189 395 267 187 58 chr15 79242637 79242808 -24252166 + B3A SINE B2 1 193 -5 5 1189 612 73 0 0 chr15 79242808 79242890 -24252084 + (TG)n Simple_repeat Simple_repeat 2 83 0 5 1189 238 238 95 0 chr15 79243301 79243364 -24251610 - MIRc SINE MIR -107 161 93 5 1189 591 185 32 118 chr15 79243406 79243586 -24251388 - B3 SINE B2 -8 187 1 5 1189 229 37 0 0 chr15 79243639 79243666 -24251308 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 1189 423 101 0 37 chr15 79243666 79243748 -24251226 + (GGGGA)n Simple_repeat Simple_repeat 4 82 0 5 1189 870 191 21 47 chr15 79243761 79243964 -24251010 + B3A SINE B2 3 188 -7 5 1189 392 317 131 0 chr15 79243986 79244185 -24250789 + B4A SINE B4 7 231 -61 5 1189 189 343 43 43 chr15 79244485 79244625 -24250349 + L2c LINE L2 3032 3171 -216 5 1189 260 268 0 53 chr15 79244653 79244728 -24250246 - ID4 SINE ID -11 72 2 5 1189 25 0 0 0 chr15 79245613 79245638 -24249336 + AT_rich Low_complexity Low_complexity 1 25 0 5 1189 448 219 161 34 chr15 79245641 79245759 -24249215 - B1_Mur1 SINE Alu -16 133 1 5 1189 1367 99 0 25 chr15 79245764 79245961 -24249013 - B2_Mm2 SINE B2 -2 193 2 5 1189 1194 68 0 0 chr15 79245986 79246134 -24248840 - B1_Mus1 SINE Alu 0 148 1 5 1189 311 245 17 117 chr15 79246234 79246354 -24248620 - RSINE1 SINE B4 -50 115 8 5 1189 278 176 40 99 chr15 79246404 79246417 -24248557 - B2_Mm2 SINE B2 0 195 183 5 1189 1242 41 0 0 chr15 79246417 79246564 -24248410 - B1_Mus2 SINE Alu 0 147 1 5 1189 329 153 92 8 chr15 79246564 79246643 -24248331 - B2_Mm1t SINE B2 -4 189 108 5 1189 1111 51 0 35 chr15 79246643 79246785 -24248189 - B1_Mm SINE Alu -10 137 1 5 1189 539 238 63 0 chr15 79246860 79246986 -24247988 + ID_B1 SINE B4 82 215 -9 5 1189 2292 90 51 0 chr15 79247425 79247736 -24247238 + ORR1A2 LTR MaLR 1 327 0 5 1189 207 0 0 0 chr15 79248530 79248553 -24246421 + (TAA)n Simple_repeat Simple_repeat 2 24 0 5 1189 462 61 0 0 chr15 79248953 79249019 -24245955 + (TC)n Simple_repeat Simple_repeat 1 66 0 5 1189 214 306 0 0 chr15 79249511 79249596 -24245378 + T-rich Low_complexity Low_complexity 1 85 0 5 1189 573 75 140 0 chr15 79257098 79257191 -24237783 + B2_Mm2 SINE B2 2 107 -88 5 1189 207 0 0 0 chr15 79257507 79257530 -24237444 + (TTA)n Simple_repeat Simple_repeat 3 25 0 5 1189 562 201 138 29 chr15 79257847 79257985 -24236989 - RSINE1 SINE B4 -10 155 3 5 1189 217 361 12 0 chr15 79258049 79258132 -24236842 - BC1_Mm scRNA scRNA -62 90 7 5 1189 354 303 55 9 chr15 79258140 79258250 -24236724 - PB1D7 SINE Alu -1 119 5 5 1189 536 254 0 17 chr15 79258296 79258416 -24236558 - PB1D7 SINE Alu 0 120 3 5 1189 710 254 41 0 chr15 79258486 79258655 -24236319 + B3A SINE B2 1 176 -22 5 1189 464 201 206 12 chr15 79258669 79258798 -24236176 - B1_Mus1 SINE Alu 0 150 1 5 1189 274 301 134 42 chr15 79258677 79258819 -24236155 - B4A SINE B4 -73 219 65 5 1189 225 236 18 0 chr15 79258813 79258868 -24236106 + B4A SINE B4 217 272 -20 5 1189 1347 158 251 60 chr15 79259014 79259364 -24235610 + MTC LTR MaLR 1 417 -4 5 1189 658 247 204 88 chr15 79259617 79259936 -24235038 + ORR1D2 LTR MaLR 4 359 -11 5 1189 189 0 0 0 chr15 79260438 79260459 -24234515 + (C)n Simple_repeat Simple_repeat 1 21 0 5 1189 476 277 42 0 chr15 79261344 79261463 -24233511 + B1F SINE Alu 3 126 -23 5 1189 699 223 12 30 chr15 79261549 79261741 -24233233 - B3 SINE B2 0 195 13 5 1189 243 220 0 0 chr15 79261972 79262022 -24232952 - PB1D10 SINE Alu -22 95 46 5 1189 219 88 0 0 chr15 79262112 79262146 -24232828 + (CAGAGA)n Simple_repeat Simple_repeat 3 36 0 5 1189 263 49 24 0 chr15 79262157 79262198 -24232776 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1189 581 202 34 0 chr15 79262227 79262346 -24232628 + RSINE1 SINE B4 2 124 -41 5 1189 411 83 0 0 chr15 79262346 79262406 -24232568 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1189 452 241 145 8 chr15 79262808 79262925 -24232049 + B1_Mur1 SINE Alu 2 134 -15 6 1189 444 281 7 82 chr15 79262941 79263088 -24231886 - B3A SINE B2 -27 171 36 6 1189 390 157 58 2 chr15 79263125 79263230 -24231744 - B1_Mur4 SINE Alu 0 150 9 6 1189 351 186 29 0 chr15 79263238 79263308 -24231666 - PB1D9 SINE Alu -5 115 44 6 1189 251 354 78 5 chr15 79263358 79263551 -24231423 + L1MC LINE L1 5688 5894 -1988 6 1189 480 276 91 19 chr15 79263728 79263963 -24231011 - L1MB8 LINE L1 -75 6103 5857 6 1189 1113 82 0 39 chr15 79264068 79264221 -24230753 + B1_Mus1 SINE Alu 2 148 0 6 1189 387 0 0 0 chr15 79264256 79264299 -24230675 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1189 810 235 8 132 chr15 79264324 79264373 -24230601 - B4A SINE B4 -35 257 216 6 1189 664 225 184 16 chr15 79264373 79264558 -24230416 + B3 SINE B2 1 216 0 6 1189 810 235 8 132 chr15 79264558 79264773 -24230201 - B4A SINE B4 -77 215 26 6 1189 423 255 20 0 chr15 79264924 79265022 -24229952 + PB1D10 SINE Alu 5 104 -13 6 1189 234 311 16 0 chr15 79265116 79265177 -24229797 - B4A SINE B4 -4 288 227 6 1189 485 261 0 22 chr15 79265416 79265553 -24229421 - MER20 DNA MER1_type -70 149 16 6 1189 201 280 107 29 chr15 79265987 79266090 -24228884 - MIR SINE MIR -78 130 20 6 1189 419 232 8 97 chr15 79266543 79266557 -24228417 + MT2B LTR ERVL 152 154 -447 6 1189 828 166 14 0 chr15 79266557 79266702 -24228272 + B1_Mur1 SINE Alu 3 149 0 6 1189 180 0 0 0 chr15 79267430 79267450 -24227524 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 1189 400 209 9 2 chr15 79267792 79267884 -24227090 - AluG_3 SINE Alu -90 221 140 6 1189 26 0 0 0 chr15 79272356 79272382 -24222592 + GC_rich Low_complexity Low_complexity 1 26 0 6 1189 209 233 28 37 chr15 79272395 79272502 -24222472 + (CCGCG)n Simple_repeat Simple_repeat 4 109 0 6 1189 25 0 0 0 chr15 79272577 79272602 -24222372 + GC_rich Low_complexity Low_complexity 1 25 0 6 1189 196 241 0 7 chr15 79273397 79273460 -24221514 - MIR SINE MIR -135 133 73 6 1189 396 0 0 0 chr15 79274251 79274295 -24220679 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1189 411 298 8 8 chr15 79275203 79275325 -24219649 + RSINE1 SINE B4 44 165 0 6 1189 351 342 43 37 chr15 79275418 79275582 -24219392 + L2a LINE L2 3210 3425 -1 6 1189 339 230 40 0 chr15 79275793 79275867 -24219107 - B3A SINE B2 -39 159 83 6 1189 393 216 128 0 chr15 79275899 79276001 -24218973 + RSINE1 SINE B4 37 151 -14 6 1189 556 220 27 47 chr15 79276113 79276261 -24218713 + B1_Mus2 SINE Alu 1 145 -2 6 1189 200 188 0 0 chr15 79276262 79276294 -24218680 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6 1189 522 240 88 0 chr15 79276457 79276582 -24218392 + B1_Mur2 SINE Alu 5 140 -9 6 1189 364 256 233 0 chr15 79276597 79276726 -24218248 + B3A SINE B2 1 159 -39 6 1189 389 20 20 0 chr15 79276744 79276794 -24218180 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1189 881 120 0 21 chr15 79276949 79277094 -24217880 + B1_Mus1 SINE Alu 6 147 -1 6 1189 1186 56 7 0 chr15 79277210 79277354 -24217620 - B1_Mus2 SINE Alu 0 147 3 6 1189 182 37 0 36 chr15 79277495 79277523 -24217451 + (CCCCCT)n Simple_repeat Simple_repeat 6 32 0 6 1189 225 0 0 0 chr15 79277523 79277548 -24217426 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 1189 632 156 78 99 chr15 79278074 79278216 -24216758 + B1_Mus1 SINE Alu 1 139 -9 6 1189 1177 68 0 7 chr15 79278427 79278574 -24216400 - B1_Mus2 SINE Alu -1 146 1 6 1189 401 233 93 46 chr15 79278672 79278780 -24216194 - PB1 SINE Alu -2 125 13 6 1189 431 204 510 14 chr15 79278802 79278945 -24216029 - B3 SINE B2 -2 214 1 6 1189 479 238 80 123 chr15 79279084 79279258 -24215716 + B3A SINE B2 1 168 -30 6 1189 324 0 0 0 chr15 79279258 79279294 -24215680 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1189 479 238 80 123 chr15 79279294 79279306 -24215668 + B3A SINE B2 169 179 -19 6 1189 235 344 56 0 chr15 79279967 79280057 -24214917 - PB1 SINE Alu -31 96 2 6 1189 335 266 0 114 chr15 79280775 79280898 -24214076 + PB1D9 SINE Alu 12 120 0 6 1189 239 257 42 28 chr15 79281083 79281155 -24213819 - B4A SINE B4 -4 288 216 6 1189 673 301 60 5 chr15 79281236 79281453 -24213521 - B4A SINE B4 -59 233 5 6 1189 361 311 19 10 chr15 79281757 79281861 -24213113 + RSINE1 SINE B4 59 163 -2 6 1189 739 270 32 11 chr15 79281887 79282074 -24212900 + B3 SINE B2 4 194 -22 6 1189 251 265 272 0 chr15 79282091 79282227 -24212747 + MIR SINE MIR 8 180 -82 6 1189 240 286 14 0 chr15 79282232 79282305 -24212669 + ID2 SINE ID 9 82 -70 6 1189 580 208 209 21 chr15 79282310 79282497 -24212477 + ID_B1 SINE B4 3 224 0 6 1189 259 340 59 33 chr15 79282537 79282689 -24212285 - FAM SINE Alu -19 292 137 6 1189 1142 52 0 0 chr15 79282809 79282945 -24212029 + B1_Mus1 SINE Alu 1 136 -12 6 1189 208 0 62 0 chr15 79282946 79282978 -24211996 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1189 2626 160 35 7 chr15 79283420 79283873 -24211101 + RMER4A LTR ERVK 1 466 0 6 1189 265 283 221 16 chr15 79284008 79284130 -24210844 - RSINE1 SINE B4 -14 151 5 6 1189 988 123 197 48 chr15 79284193 79284381 -24210593 - B3 SINE B2 0 216 1 6 1189 859 231 43 9 chr15 79284394 79284604 -24210370 - ID_B1 SINE B4 -7 217 1 6 1189 1132 64 21 0 chr15 79284621 79284762 -24210212 - B1_Mus1 SINE Alu -3 145 2 6 1189 288 291 26 104 chr15 79284765 79284796 -24210178 - PB1D10 SINE Alu -7 110 5 6 1189 380 250 0 0 chr15 79284796 79284880 -24210094 - ID_B1 SINE B4 -55 169 86 6 1189 1200 68 0 0 chr15 79286517 79286663 -24208311 + B1_Mus2 SINE Alu 2 147 0 6 1189 234 0 0 0 chr15 79286663 79286689 -24208285 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1189 240 35 0 0 chr15 79286766 79286795 -24208179 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1189 320 284 94 25 chr15 79286797 79286956 -24208018 + L1ME4a LINE L1 5730 5899 -225 6 1189 1125 62 0 0 chr15 79287830 79287976 -24206998 + (CCA)n Simple_repeat Simple_repeat 1 146 0 6 1189 798 249 71 0 chr15 79287987 79288184 -24206790 + B3 SINE B2 1 211 -5 6 1189 215 157 0 56 chr15 79288208 79288222 -24206752 + (TAAA)n Simple_repeat Simple_repeat 2 15 0 6 1189 1259 34 0 7 chr15 79288222 79288370 -24206604 + B1_Mus1 SINE Alu 2 148 0 6 1189 215 157 0 56 chr15 79288370 79288409 -24206565 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 6 1189 230 143 176 73 chr15 79288920 79288988 -24205986 - PB1D10 SINE Alu -1 116 42 6 1189 187 302 25 49 chr15 79289283 79289405 -24205569 + L2c LINE L2 3075 3193 -194 6 1189 294 238 75 0 chr15 79289693 79289773 -24205201 + RSINE1 SINE B4 11 96 -69 6 1189 534 103 0 0 chr15 79289996 79290074 -24204900 + (TC)n Simple_repeat Simple_repeat 1 78 0 6 1189 1132 74 0 51 chr15 79290074 79290230 -24204744 - B1_Mus1 SINE Alu 0 148 1 6 1189 1227 42 0 0 chr15 79290521 79290664 -24204310 + B1_Mm SINE Alu 5 147 0 6 1189 370 250 21 11 chr15 79290995 79291088 -24203886 - B1_Mur2 SINE Alu 0 149 56 6 1189 214 267 0 0 chr15 79291364 79291409 -24203565 - B1F2 SINE Alu -95 54 10 6 1189 1026 136 3 1 chr15 79291976 79292911 -24202063 + (CAG)n Simple_repeat Simple_repeat 1 937 0 6 1189 641 152 6 0 chr15 79292943 79293114 -24201860 + (CAG)n Simple_repeat Simple_repeat 3 174 0 6 1189 1083 138 0 1 chr15 79293132 79293887 -24201087 + (CAG)n Simple_repeat Simple_repeat 1 754 0 6 1189 232 276 0 49 chr15 79293887 79293948 -24201026 + G-rich Low_complexity Low_complexity 4 61 0 6 1189 839 167 22 6 chr15 79294118 79294299 -24200675 + B3 SINE B2 1 191 -4 6 1189 250 282 90 0 chr15 79294758 79294836 -24200138 + MIRc SINE MIR 116 200 -68 6 1189 274 284 66 31 chr15 79295197 79295334 -24199640 - MIR SINE MIR -95 173 28 6 1189 467 216 78 113 chr15 79295413 79295554 -24199420 - B1_Mur1 SINE Alu -13 136 1 6 1189 489 156 83 0 chr15 79295560 79295656 -24199318 - PB1D10 SINE Alu -5 112 9 6 1189 401 283 134 11 chr15 79295768 79295954 -24199020 - L1MB3 LINE L1 -81 6102 5894 6 1189 236 311 14 0 chr15 79295987 79296061 -24198913 - ID4_ SINE ID -7 76 2 6 1189 235 113 19 19 chr15 79296258 79296312 -24198662 + (ATG)n Simple_repeat Simple_repeat 1 54 0 6 1189 1663 26 5 0 chr15 79296574 79296766 -24198208 - B2_Mm1t SINE B2 0 193 1 6 1189 183 42 0 0 chr15 79296832 79296856 -24198118 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 6 148 3453 157 108 2 chr15 79298390 79299030 -24195944 + RMER1B Other Other 348 1055 -11 6 1190 626 216 0 149 chr15 79299193 79299255 -24195719 - B1_Mur1 SINE Alu 0 149 95 6 1190 3176 20 0 0 chr15 79299255 79299601 -24195373 + ORR1A0 LTR MaLR 1 346 0 6 1190 626 216 0 149 chr15 79299601 79299712 -24195262 - B1_Mur1 SINE Alu -55 94 2 6 1190 722 222 65 75 chr15 79299739 79299939 -24195035 - B3A SINE B2 0 198 1 6 1190 357 381 20 0 chr15 79299954 79300101 -24194873 - ID_B1 SINE B4 -7 217 68 6 1190 447 252 133 8 chr15 79300155 79300308 -24194666 - B3A SINE B2 -1 197 39 6 1190 1392 56 0 0 chr15 79300308 79300486 -24194488 + (TTCTCC)n Simple_repeat Simple_repeat 1 178 0 6 1190 1400 62 11 17 chr15 79300487 79300667 -24194307 - B2_Mm2 SINE B2 -16 179 1 6 1190 1357 222 58 44 chr15 79300924 79301287 -24193687 - ORR1D2 LTR MaLR -2 368 1 6 1190 474 114 0 0 chr15 79301305 79301384 -24193590 + (CCGAG)n Simple_repeat Simple_repeat 3 81 0 6 1190 230 302 56 19 chr15 79302219 79302327 -24192647 + L2c LINE L2 3096 3207 -180 6 1190 480 294 0 23 chr15 79302529 79302658 -24192316 - RSINE1 SINE B4 -30 135 10 7 1190 462 189 0 0 chr15 79302701 79302812 -24192162 + (TG)n Simple_repeat Simple_repeat 1 111 0 7 1190 425 219 263 78 chr15 79302821 79302836 -24192138 - B4A SINE B4 -1 291 277 7 1190 474 65 0 0 chr15 79302836 79302898 -24192076 + (CA)n Simple_repeat Simple_repeat 1 62 0 7 1190 425 219 263 78 chr15 79302898 79303125 -24191849 - B4A SINE B4 -16 276 4 7 1190 427 228 13 0 chr15 79303166 79303245 -24191729 - ID4_ SINE ID -3 80 1 7 1190 830 193 24 72 chr15 79303540 79303747 -24191227 + B3A SINE B2 1 197 -1 7 1190 1177 62 0 7 chr15 79303771 79303906 -24191068 + B1_Mm SINE Alu 1 135 -12 7 1190 459 0 0 0 chr15 79303906 79303957 -24191017 + (TAAAA)n Simple_repeat Simple_repeat 2 52 0 7 1190 802 300 16 45 chr15 79304104 79304417 -24190557 - L1M5 LINE L1 -581 5659 5357 7 1190 207 0 0 0 chr15 79304489 79304512 -24190462 + (TA)n Simple_repeat Simple_repeat 2 24 0 7 1190 475 331 39 13 chr15 79304533 79304689 -24190285 - B3A SINE B2 -38 160 1 7 1190 271 157 247 0 chr15 79304714 79304803 -24190171 - L1MEe LINE L1 -3703 1151 1041 7 1190 22 0 0 0 chr15 79304930 79304952 -24190022 + AT_rich Low_complexity Low_complexity 1 22 0 7 1190 827 151 13 33 chr15 79305115 79305266 -24189708 - B1_Mur1 SINE Alu 0 149 2 7 1190 1447 62 17 0 chr15 79305386 79305564 -24189410 - B2_Mm2 SINE B2 -14 181 1 7 1190 952 272 131 6 chr15 79306018 79306347 -24188627 + MTD LTR MaLR 1 387 -32 7 1190 1164 75 7 0 chr15 79306380 79306526 -24188448 + B1_Mus2 SINE Alu 1 147 0 7 1190 1322 64 35 0 chr15 79306569 79306742 -24188232 - B2_Mm1t SINE B2 -14 179 1 7 1190 754 174 78 21 chr15 79306773 79306914 -24188060 - B1_Mur4 SINE Alu -1 149 1 7 1190 513 0 0 0 chr15 79307003 79307060 -24187914 + (TG)n Simple_repeat Simple_repeat 1 57 0 7 1190 348 24 0 0 chr15 79307060 79307100 -24187874 + (GA)n Simple_repeat Simple_repeat 1 41 0 7 1190 1510 58 16 10 chr15 79308424 79308617 -24186357 + B2_Mm2 SINE B2 2 195 0 7 1190 502 299 45 0 chr15 79308655 79308789 -24186185 - ID_B1 SINE B4 -82 142 3 7 1190 258 346 39 23 chr15 79308930 79309060 -24185914 - ORR1E LTR MaLR -222 137 6 7 1190 186 378 12 0 chr15 79310595 79310677 -24184297 + L4 LINE RTE 1768 1850 -179 7 1190 369 0 0 0 chr15 79310825 79310866 -24184108 + (CA)n Simple_repeat Simple_repeat 1 41 0 7 1190 268 280 0 0 chr15 79310871 79310946 -24184028 - MIRm SINE MIR -164 112 38 7 1190 528 162 59 29 chr15 79311124 79311226 -24183748 - B1_Mur2 SINE Alu -1 148 44 7 1190 251 377 39 39 chr15 79311237 79311250 -24183724 - YREP_Mm Unknown Unknown -1484 328 274 7 1190 633 269 0 14 chr15 79311250 79311393 -24183581 + ID_B1 SINE B4 84 224 0 7 1190 251 377 39 39 chr15 79311393 79311419 -24183555 - YREP_Mm Unknown Unknown -1484 273 147 7 1190 417 209 50 187 chr15 79313602 79313702 -24181272 + B4A SINE B4 135 229 -63 7 1190 898 199 72 38 chr15 79313702 79313911 -24181063 + B3 SINE B2 1 216 0 7 1190 417 209 50 187 chr15 79313911 79313992 -24180982 + B4A SINE B4 230 291 -1 7 1190 333 0 0 0 chr15 79314009 79314046 -24180928 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1190 275 0 29 0 chr15 79314098 79314133 -24180841 + (TC)n Simple_repeat Simple_repeat 2 37 0 7 1190 1490 82 0 5 chr15 79316549 79316745 -24178229 - B2_Mm2 SINE B2 0 195 1 7 1190 516 266 43 7 chr15 79316747 79316887 -24178087 - B1_Mur1 SINE Alu 0 149 5 7 1190 318 106 0 0 chr15 79316898 79316945 -24178029 + (CCA)n Simple_repeat Simple_repeat 1 47 0 7 1190 436 307 86 14 chr15 79316952 79317091 -24177883 - RSINE1 SINE B4 -15 150 2 7 1190 375 256 0 0 chr15 79317097 79317175 -24177799 - ID4 SINE ID 0 83 6 7 1190 778 191 0 14 chr15 79321249 79321392 -24173582 + B1_Mur1 SINE Alu 8 148 -1 7 1190 672 275 133 13 chr15 79321515 79321740 -24173234 - B4 SINE B4 -21 271 20 7 1190 181 237 50 17 chr15 79321779 79321839 -24173135 + MIR SINE MIR 77 138 -70 7 1190 219 432 23 8 chr15 79322339 79322472 -24172502 - MIR SINE MIR -22 240 106 7 1190 213 156 0 0 chr15 79322486 79322518 -24172456 + B1F1 SINE Alu 68 99 -50 7 1190 434 215 0 204 chr15 79323187 79323339 -24171635 + ID_B1 SINE B4 104 224 0 7 1190 1432 85 16 0 chr15 79323341 79323529 -24171445 + B2_Mm2 SINE B2 2 192 -3 7 1190 241 264 0 0 chr15 79323537 79323590 -24171384 + B4A SINE B4 83 135 -157 7 1190 546 203 74 33 chr15 79323548 79323670 -24171304 + B1_Mur1 SINE Alu 9 135 -14 7 1190 468 0 0 0 chr15 79323670 79323722 -24171252 + (GAAA)n Simple_repeat Simple_repeat 1 52 0 7 1190 1016 136 6 0 chr15 79323724 79323900 -24171074 + (GGAA)n Simple_repeat Simple_repeat 3 179 0 7 1190 649 274 59 67 chr15 79324787 79325041 -24169933 - B4A SINE B4 0 292 41 7 1190 959 137 6 0 chr15 79326602 79326777 -24168197 + (TCCA)n Simple_repeat Simple_repeat 4 179 0 7 1190 698 151 8 16 chr15 79326949 79327070 -24167904 + PB1D9 SINE Alu 1 120 0 7 1190 405 0 0 0 chr15 79327534 79327579 -24167395 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 1190 482 244 78 9 chr15 79327671 79327787 -24167187 - B1F SINE Alu -23 126 3 7 1190 240 315 76 30 chr15 79327876 79328007 -24166967 + ID_B1 SINE B4 80 216 -8 7 1190 1213 55 7 0 chr15 79328016 79328162 -24166812 + B1_Mus1 SINE Alu 2 148 0 7 1190 665 228 76 0 chr15 79330077 79330145 -24164829 + ID SINE ID 2 81 -143 7 1190 396 279 19 0 chr15 79330145 79330249 -24164725 + PB1D10 SINE Alu 1 106 -11 7 1190 199 242 161 0 chr15 79331065 79331127 -24163847 - MIRc SINE MIR -112 156 85 7 1190 184 108 75 75 chr15 79331466 79331506 -24163468 + MIR SINE MIR 106 145 -63 7 1190 372 378 20 12 chr15 79331656 79331854 -24163120 + MIRb SINE MIR 27 231 -37 7 1190 215 349 63 8 chr15 79332538 79332665 -24162309 + MIR3 SINE MIR 30 163 -45 7 1190 185 305 45 54 chr15 79332804 79332915 -24162059 + L2 LINE L2 1429 1538 -1881 7 1190 261 279 25 0 chr15 79332852 79332931 -24162043 - MIR SINE MIR -98 164 84 7 1190 240 281 0 0 chr15 79334026 79334090 -24160884 - MIRm SINE MIR -121 155 92 7 1190 266 314 50 34 chr15 79334361 79334502 -24160472 - MIRc SINE MIR -22 186 48 7 1190 233 255 20 62 chr15 79336062 79336208 -24158766 + (CCCCG)n Simple_repeat Simple_repeat 4 143 0 7 1190 21 0 0 0 chr15 79336221 79336242 -24158732 + GC_rich Low_complexity Low_complexity 1 21 0 7 1190 742 247 29 6 chr15 79336989 79337164 -24157810 - B3A SINE B2 -16 182 4 7 1190 459 0 0 0 chr15 79338137 79338188 -24156786 + (TG)n Simple_repeat Simple_repeat 1 51 0 7 1190 288 0 0 0 chr15 79338845 79338877 -24156097 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 1190 213 218 26 74 chr15 79338917 79338993 -24155981 + MIRm SINE MIR 82 152 -56 7 1190 1196 58 0 0 chr15 79339161 79339300 -24155674 + B1_Mus1 SINE Alu 1 139 -9 7 1190 315 0 0 0 chr15 79339300 79339335 -24155639 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1190 306 324 110 41 chr15 79339493 79339638 -24155336 - MIRc SINE MIR -65 203 49 7 1190 1262 61 0 0 chr15 79339672 79339820 -24155154 + B1_Mus1 SINE Alu 1 148 0 7 1190 201 39 0 0 chr15 79339820 79339846 -24155128 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 7 1190 1081 141 5 37 chr15 79340020 79340211 -24154763 + B2_Mm2 SINE B2 1 185 -10 7 1190 227 222 0 69 chr15 79340263 79340321 -24154653 - MIR3 SINE MIR -38 170 117 7 1190 299 121 0 17 chr15 79341168 79341227 -24153747 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 1190 215 299 45 0 chr15 79341702 79341769 -24153205 - MIR SINE MIR -87 121 52 7 1190 1193 119 0 35 chr15 79343623 79343823 -24151151 - B2_Mm2 SINE B2 -1 194 2 7 1190 1079 114 6 0 chr15 79343825 79344000 -24150974 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 7 1190 372 200 0 48 chr15 79344004 79344088 -24150886 - PB1D7 SINE Alu -37 83 4 7 1190 271 262 12 59 chr15 79344017 79344102 -24150872 - ID_B1 SINE B4 -74 150 70 7 1190 355 292 69 0 chr15 79344351 79344481 -24150493 - MIR3 SINE MIR -54 154 16 7 1190 363 216 0 0 chr15 79345210 79345326 -24149648 + (TG)n Simple_repeat Simple_repeat 1 116 0 7 1190 2837 127 138 4 chr15 79345340 79345832 -24149142 + RMER15 LTR ERVL 1 558 -17 7 1190 360 0 0 0 chr15 79345833 79345873 -24149101 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1190 22 0 0 0 chr15 79347074 79347096 -24147878 + GC_rich Low_complexity Low_complexity 1 22 0 7 1190 998 123 0 14 chr15 79348892 79349040 -24145934 + B1_Mus1 SINE Alu 3 148 0 7 1190 237 108 0 0 chr15 79349669 79349706 -24145268 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1190 212 138 346 12 chr15 79350228 79350309 -24144665 - PB1D9 SINE Alu 0 120 13 7 1190 603 263 7 21 chr15 79350426 79350566 -24144408 + ID_B1 SINE B4 78 215 -9 7 1190 425 309 85 26 chr15 79350580 79350733 -24144241 + RSINE1 SINE B4 4 165 0 7 1190 28 29 0 0 chr15 79350745 79350780 -24144194 + AT_rich Low_complexity Low_complexity 1 35 0 7 1190 1289 99 28 0 chr15 79350786 79350968 -24144006 + B2_Mm2 SINE B2 2 188 -7 7 1190 436 237 218 56 chr15 79351042 79351208 -24143766 + B3 SINE B2 3 199 -17 7 1190 366 252 82 27 chr15 79351208 79351318 -24143656 - PB1D9 SINE Alu 0 120 5 7 1190 436 237 218 56 chr15 79351318 79351330 -24143644 + B3 SINE B2 200 210 -6 7 1190 897 239 40 5 chr15 79351361 79351559 -24143415 - B3 SINE B2 -10 206 2 7 1190 180 0 0 0 chr15 79351577 79351597 -24143377 + (CAGA)n Simple_repeat Simple_repeat 2 21 0 8 1190 292 259 0 47 chr15 79351602 79351687 -24143287 + B1F2 SINE Alu 1 81 -68 8 1190 412 185 206 0 chr15 79351726 79351818 -24143156 - PB1D9 SINE Alu -8 112 2 8 1190 183 156 0 0 chr15 79351830 79351862 -24143112 + T-rich Low_complexity Low_complexity 1 32 0 8 1190 1228 74 0 0 chr15 79351862 79352010 -24142964 - B1_Mus1 SINE Alu 0 148 1 8 1190 365 130 0 17 chr15 79352012 79352126 -24142848 - B2_Mm2 SINE B2 -1 194 47 8 1190 1209 114 11 6 chr15 79352154 79352331 -24142643 - B2_Mm1t SINE B2 -14 179 2 8 1190 861 182 21 0 chr15 79352368 79352511 -24142463 - B1_Mur3 SINE Alu -1 148 3 8 1190 320 211 84 0 chr15 79352511 79352582 -24142392 + B1_Mur1 SINE Alu 73 149 0 8 1190 352 269 26 0 chr15 79352721 79352799 -24142175 - ID4 SINE ID -2 81 2 8 1190 216 0 0 0 chr15 79353150 79353174 -24141800 + (CAGGG)n Simple_repeat Simple_repeat 2 25 0 8 1190 411 229 198 18 chr15 79353543 79353654 -24141320 + B1F2 SINE Alu 13 143 -6 8 1190 300 137 0 0 chr15 79353666 79353717 -24141257 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1190 402 252 43 98 chr15 79353892 79354076 -24140898 + MT2B LTR ERVL 93 257 -327 8 1190 825 105 9 0 chr15 79353997 79354111 -24140863 + B1_Mus2 SINE Alu 23 137 -10 8 1190 1346 63 0 22 chr15 79354273 79354452 -24140522 - B2_Mm2 SINE B2 -20 175 1 8 1190 267 77 0 0 chr15 79354452 79354491 -24140483 - B2_Mm2 SINE B2 -155 40 2 8 1190 314 241 46 8 chr15 79354828 79354920 -24140054 + MER5A1 DNA MER1_type 14 107 -59 8 1190 204 67 0 0 chr15 79354920 79354950 -24140024 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 8 1190 288 286 0 0 chr15 79355058 79355128 -24139846 + (CA)n Simple_repeat Simple_repeat 1 70 0 8 1190 250 296 192 48 chr15 79356334 79356395 -24138579 - B4A SINE B4 -14 278 88 8 1190 512 164 33 0 chr15 79356395 79356501 -24138473 - PB1D9 SINE Alu -5 115 3 8 1190 703 218 21 14 chr15 79356512 79356656 -24138318 + ORR1B1 LTR MaLR 8 152 -242 8 1190 1054 177 128 0 chr15 79356656 79356859 -24138115 + MERVL_2A-int LTR ERVL 4756 4984 -777 8 1190 254 277 67 38 chr15 79356859 79356964 -24138010 - ORR1B1 LTR MaLR -196 198 91 8 1190 225 139 93 0 chr15 79357389 79357432 -24137542 + PB1D9 SINE Alu 40 86 -34 8 1190 185 250 0 0 chr15 79360003 79360043 -24134931 - L2 LINE L2 -3369 50 11 8 1190 222 37 0 0 chr15 79360454 79360481 -24134493 + (AGGGGG)n Simple_repeat Simple_repeat 2 28 0 8 1190 238 154 0 0 chr15 79361239 79361284 -24133690 - Alu SINE Alu -12 163 99 8 1190 607 112 256 50 chr15 79361331 79361491 -24133483 + B2_Mm2 SINE B2 1 193 -2 8 1190 1156 89 0 7 chr15 79361494 79361641 -24133333 + B1_Mm SINE Alu 2 147 0 8 1190 652 117 11 0 chr15 79361673 79361767 -24133207 + B1_Mus2 SINE Alu 53 147 0 8 1190 212 281 78 17 chr15 79362063 79362179 -24132795 + L2 LINE L2 2612 2734 -685 8 1190 300 143 0 0 chr15 79364633 79364689 -24130285 + (A)n Simple_repeat Simple_repeat 1 56 0 8 1190 399 327 0 9 chr15 79365479 79365590 -24129384 - PB1D10 SINE Alu -7 110 1 8 1190 653 246 14 0 chr15 79365601 79365739 -24129235 - B1_Mus2 SINE Alu -5 142 3 8 1190 1093 59 0 29 chr15 79366636 79366776 -24128198 + B1_Mus1 SINE Alu 1 136 -12 8 1190 266 277 157 10 chr15 79366859 79366961 -24128013 - B3 SINE B2 -99 117 1 8 1190 614 228 0 34 chr15 79367283 79367401 -24127573 + PB1D9 SINE Alu 2 115 -5 8 1190 555 210 56 25 chr15 79367651 79367812 -24127162 - URR1B DNA MER1_type 0 225 60 8 1190 294 277 47 47 chr15 79368059 79368165 -24126809 + PB1D10 SINE Alu 5 110 -7 8 1190 326 109 60 50 chr15 79368196 79368273 -24126701 - B1_Mus2 SINE Alu 0 147 30 8 1190 534 296 98 27 chr15 79368388 79368572 -24126402 + ID_B1 SINE B4 23 219 -5 8 1190 403 223 41 41 chr15 79368832 79368930 -24126044 + PB1D10 SINE Alu 19 116 -1 8 1190 259 299 144 0 chr15 79370235 79370332 -24124642 + RSINE1 SINE B4 42 152 -13 8 1190 339 294 21 21 chr15 79370389 79370483 -24124491 + ID4_ SINE ID 8 99 -53 8 1190 191 336 36 55 chr15 79370628 79370738 -24124236 + MIRm SINE MIR 79 186 -90 8 1190 683 214 13 58 chr15 79371044 79371198 -24123776 - B1_Mus2 SINE Alu 0 147 1 8 1190 684 122 103 37 chr15 79371243 79371379 -24123595 + B1_Mus2 SINE Alu 1 145 -2 8 1190 795 98 0 0 chr15 79371658 79371781 -24123193 + (TC)n Simple_repeat Simple_repeat 2 124 0 8 1190 1069 88 0 0 chr15 79371790 79371926 -24123048 - B1_Mus2 SINE Alu -11 136 1 8 1190 224 213 21 0 chr15 79372169 79372216 -24122758 + B3A SINE B2 15 62 -136 8 1190 297 325 0 111 chr15 79372353 79372391 -24122583 + MT2B LTR ERVL 133 155 -446 8 1190 589 199 3 11 chr15 79372391 79372515 -24122459 + B1_Mus2 SINE Alu 1 120 0 8 1190 477 167 10 77 chr15 79372709 79372813 -24122161 - PB1D9 SINE Alu -23 97 1 8 1190 266 264 87 130 chr15 79372813 79372871 -24122103 - MT2B LTR ERVL -457 144 94 8 1190 399 267 74 8 chr15 79373158 79373279 -24121695 + B1F2 SINE Alu 1 129 -20 8 1190 207 100 0 0 chr15 79373330 79373360 -24121614 + (T)n Simple_repeat Simple_repeat 1 30 0 8 1190 1195 55 0 14 chr15 79373360 79373508 -24121466 - B1_Mus2 SINE Alu 0 147 2 8 1190 354 306 14 120 chr15 79373741 79373949 -24121025 + MT2B2 LTR ERVL 72 257 -327 8 1190 423 295 58 88 chr15 79373822 79373848 -24121126 + B4 SINE B4 58 78 -214 8 1190 749 194 7 14 chr15 79373848 79373994 -24120980 + B1_Mus2 SINE Alu 2 146 -1 8 1190 357 207 0 0 chr15 79374731 79374789 -24120185 - PB1D7 SINE Alu -60 60 3 8 1190 266 313 77 27 chr15 79374885 79375033 -24119941 + PB1D10 SINE Alu 1 146 -1 8 1190 419 206 111 9 chr15 79375178 79375286 -24119688 - PB1D9 SINE Alu 0 120 2 8 1190 264 161 168 18 chr15 79376029 79376132 -24118842 - PB1D10 SINE Alu -22 127 11 8 1190 181 283 124 52 chr15 79378114 79378211 -24116763 - L2a LINE L2 -41 3385 3282 8 1190 402 293 55 89 chr15 79378262 79378464 -24116510 + ID_B1 SINE B4 23 217 -7 8 1190 616 140 100 50 chr15 79378356 79378476 -24116498 + B1_Mur4 SINE Alu 24 149 -1 8 1190 214 351 26 0 chr15 79378717 79378794 -24116180 - L2a LINE L2 -613 2806 2728 8 1190 383 136 106 0 chr15 79378819 79378885 -24116089 + B1_Mur2 SINE Alu 60 132 -17 8 1190 2391 72 19 12 chr15 79379103 79379428 -24115546 + ORR1A2 LTR MaLR 1 327 0 8 1190 1411 63 0 60 chr15 79379484 79379643 -24115331 + B2_Mm1a SINE B2 2 160 -33 8 1190 279 0 0 0 chr15 79379643 79379674 -24115300 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 8 1190 1411 63 0 60 chr15 79379674 79379715 -24115259 + B2_Mm1a SINE B2 161 190 -3 8 1190 467 248 42 17 chr15 79380013 79380132 -24114842 - B3A SINE B2 -66 132 11 8 1190 184 188 73 59 chr15 79380284 79380352 -24114622 - MIRb SINE MIR -21 247 179 8 1190 194 364 61 0 chr15 79380451 79380517 -24114457 - MIR SINE MIR -123 139 70 8 1190 248 269 128 11 chr15 79380526 79380620 -24114354 - MER20 DNA MER1_type -88 131 27 8 1190 1194 48 7 27 chr15 79380925 79381075 -24113899 - B1_Mus1 SINE Alu 0 148 2 8 1190 958 127 49 0 chr15 79381211 79381353 -24113621 - B1_Mur3 SINE Alu 0 149 1 8 1190 2773 121 193 94 chr15 79381565 79381838 -24113136 - RLTR21 LTR ERVK 0 1572 1303 8 1190 333 0 0 0 chr15 79381838 79381875 -24113099 + (TC)n Simple_repeat Simple_repeat 2 38 0 8 1190 546 98 0 0 chr15 79381876 79381958 -24113016 + (CA)n Simple_repeat Simple_repeat 2 83 0 8 1190 2773 121 193 94 chr15 79381958 79382278 -24112696 - RLTR21 LTR ERVK -270 1302 957 8 1190 1189 55 7 0 chr15 79382278 79382423 -24112551 + B1_Mus2 SINE Alu 2 147 0 8 1190 2773 121 193 94 chr15 79382423 79382519 -24112455 - RLTR21 LTR ERVK -616 956 815 8 1190 222 62 0 0 chr15 79382520 79382552 -24112422 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 8 1190 1116 65 0 0 chr15 79382552 79382690 -24112284 - B1_Mus2 SINE Alu -9 138 1 8 1190 1194 67 139 0 chr15 79382691 79382871 -24112103 - RLTR21 LTR ERVK -947 625 421 8 1190 1069 165 90 5 chr15 79382870 79383059 -24111915 - RLTR21 LTR ERVK -1367 205 1 8 1190 257 271 0 54 chr15 79383205 79383279 -24111695 + PB1D10 SINE Alu 31 100 -17 8 1190 468 0 0 0 chr15 79383280 79383332 -24111642 + (TG)n Simple_repeat Simple_repeat 1 52 0 8 1190 243 0 0 0 chr15 79383332 79383358 -24111616 + (GA)n Simple_repeat Simple_repeat 1 27 0 8 1190 330 293 0 0 chr15 79383374 79383449 -24111525 + ID4_ SINE ID 6 80 -3 8 1190 1253 119 17 0 chr15 79383691 79383867 -24111107 - B2_Mm2 SINE B2 -15 180 2 8 1190 352 206 75 11 chr15 79383870 79383963 -24111011 - B3 SINE B2 0 216 118 8 1190 269 317 116 8 chr15 79384296 79384417 -24110557 + MLT1L LTR MaLR 297 430 -180 8 1190 216 271 28 28 chr15 79384624 79384696 -24110278 + B3A SINE B2 3 74 -124 8 1190 861 19 0 0 chr15 79384746 79384849 -24110125 + (CA)n Simple_repeat Simple_repeat 2 104 0 8 1190 234 0 0 0 chr15 79384849 79384874 -24110100 + (GA)n Simple_repeat Simple_repeat 2 27 0 8 1190 1164 41 7 40 chr15 79385003 79385154 -24109820 - B1_Mm SINE Alu 0 147 2 8 1190 207 0 0 0 chr15 79385416 79385439 -24109535 + (T)n Simple_repeat Simple_repeat 1 23 0 8 1190 382 241 80 36 chr15 79385439 79385451 -24109523 - PB1D10 SINE Alu 0 117 106 8 1190 1121 82 7 0 chr15 79385451 79385597 -24109377 - B1_Mm SINE Alu 0 147 1 8 1190 383 241 80 36 chr15 79385597 79385696 -24109278 - B1F1 SINE Alu -12 105 1 8 1190 6887 51 2 46 chr15 79385734 79386458 -24108516 - L1_Mus1 LINE L1 0 6567 5849 8 1190 3403 43 0 12 chr15 79386458 79386859 -24108115 + MTA_Mm LTR MaLR 1 396 0 9 1190 6887 51 2 46 chr15 79386859 79386945 -24108029 - L1_Mus1 LINE L1 -719 5848 5798 8 1190 1129 56 35 0 chr15 79386945 79387087 -24107887 - B1_Mus2 SINE Alu 0 147 1 9 1190 6887 51 2 46 chr15 79387087 79387235 -24107739 - L1_Mus1 LINE L1 -770 5797 5650 8 1190 1041 71 0 41 chr15 79387460 79387607 -24107367 - B1_Mus1 SINE Alu -5 143 3 9 1190 1024 95 22 0 chr15 79387978 79388115 -24106859 + B1_Mus1 SINE Alu 2 141 -7 9 1190 216 190 24 12 chr15 79388216 79388301 -24106673 + (TATAA)n Simple_repeat Simple_repeat 5 90 0 9 1190 28 29 0 0 chr15 79388314 79388349 -24106625 + AT_rich Low_complexity Low_complexity 1 35 0 9 1190 421 244 118 0 chr15 79388353 79388480 -24106494 - B1_Mur1 SINE Alu -7 142 1 9 1190 216 135 0 0 chr15 79388539 79388576 -24106398 + (T)n Simple_repeat Simple_repeat 1 37 0 9 1190 1173 61 0 0 chr15 79388576 79388723 -24106251 - B1_Mus2 SINE Alu 0 147 1 9 1190 282 308 0 13 chr15 79388731 79388810 -24106164 - ID2 SINE ID -1 82 5 9 1190 265 192 19 0 chr15 79389003 79389055 -24105919 - ID4 SINE ID -28 55 3 9 1190 2260 106 22 0 chr15 79389075 79389397 -24105577 + ORR1A4 LTR MaLR 1 329 0 9 1190 235 270 168 42 chr15 79389497 79389640 -24105334 + MER89 LTR ERV1 361 521 -38 9 1190 365 335 62 36 chr15 79389659 79389966 -24105008 + MLT1K LTR MaLR 274 588 -7 9 1190 4540 116 44 8 chr15 79389966 79390696 -24104278 + RMER6A LTR ERVK 1 756 0 9 1190 710 196 7 20 chr15 79391116 79391262 -24103712 + B1_Mur3 SINE Alu 5 148 -1 9 1190 1040 114 71 44 chr15 79391290 79391473 -24103501 - B2_Mm2 SINE B2 -6 189 2 9 1190 24 32 0 0 chr15 79391995 79392026 -24102948 + AT_rich Low_complexity Low_complexity 1 31 0 9 1190 290 250 55 83 chr15 79392196 79392305 -24102669 - PB1D10 SINE Alu -7 110 5 9 1190 247 329 0 0 chr15 79393857 79393933 -24101041 - ID4 SINE ID -6 77 2 9 1190 459 160 170 0 chr15 79393964 79394070 -24100904 - B1_Mur2 SINE Alu 0 149 26 9 1190 241 284 68 0 chr15 79394090 79394164 -24100810 - PB1D10 SINE Alu -23 94 16 9 1190 436 344 86 45 chr15 79394201 79394423 -24100551 - B4A SINE B4 -10 282 52 9 1190 234 263 53 0 chr15 79394513 79394570 -24100404 + PB1D10 SINE Alu 51 110 -7 9 1190 983 236 14 9 chr15 79394578 79394796 -24100178 + ID_B1 SINE B4 2 220 -4 9 1190 216 0 0 0 chr15 79394971 79394995 -24099979 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 1190 1085 76 7 0 chr15 79394997 79395142 -24099832 - B1_Mur3 SINE Alu -3 146 1 9 1190 621 208 151 43 chr15 79395174 79395360 -24099614 + B3 SINE B2 1 206 -10 9 1190 312 196 0 0 chr15 79395448 79395504 -24099470 - B3 SINE B2 -160 56 1 9 1190 611 231 34 27 chr15 79395563 79395710 -24099264 - B1F SINE Alu -1 148 1 9 1190 594 244 53 8 chr15 79395957 79396089 -24098885 + ETnERV2-int LTR ERVK 7065 7202 -204 9 1190 553 225 42 14 chr15 79396528 79396672 -24098302 + B1_Mur2 SINE Alu 1 148 -1 9 1190 1371 75 32 11 chr15 79396677 79396867 -24098107 + B2_Mm2 SINE B2 2 195 0 9 1190 273 244 39 118 chr15 79397001 79397065 -24097909 - B4A SINE B4 -8 284 231 9 1190 985 140 0 20 chr15 79397065 79397218 -24097756 - B1_Mur4 SINE Alu 0 150 1 9 1190 273 244 39 118 chr15 79397218 79397255 -24097719 - B4A SINE B4 -62 230 191 9 1190 277 262 36 0 chr15 79397628 79397712 -24097262 + B4 SINE B4 83 169 -123 9 1190 548 175 19 0 chr15 79397638 79397741 -24097233 + PB1D9 SINE Alu 9 113 -7 9 1190 213 65 0 0 chr15 79397777 79397808 -24097166 + (CAAAC)n Simple_repeat Simple_repeat 1 31 0 9 1190 328 228 36 48 chr15 79397961 79398044 -24096930 - ID4_ SINE ID 0 83 2 9 1190 565 223 0 40 chr15 79398058 79398184 -24096790 - B1F SINE Alu -5 144 24 9 1190 1296 107 44 0 chr15 79398229 79398435 -24096539 - L1_Mus3 LINE L1 -8 6630 6416 9 1190 372 271 28 9 chr15 79398440 79398548 -24096426 - PB1D10 SINE Alu -5 112 3 9 1190 1083 58 0 41 chr15 79398594 79398739 -24096235 + B1_Mus1 SINE Alu 1 139 -9 9 1190 210 71 0 0 chr15 79399284 79399312 -24095662 + (TCTCCC)n Simple_repeat Simple_repeat 3 30 0 9 1190 189 0 0 0 chr15 79399312 79399333 -24095641 + (TG)n Simple_repeat Simple_repeat 2 22 0 9 1190 757 269 47 9 chr15 79399364 79399596 -24095378 - B4 SINE B4 -51 241 1 9 1190 1206 94 77 0 chr15 79399753 79399934 -24095040 - B2_Mm2 SINE B2 0 195 1 9 1190 220 320 148 10 chr15 79399939 79400040 -24094934 - PB1D7 SINE Alu 0 120 6 9 1190 1060 35 7 0 chr15 79400082 79400223 -24094751 + B1_Mus2 SINE Alu 6 147 0 9 1190 247 271 0 17 chr15 79400252 79400312 -24094662 + ID4 SINE ID 25 83 0 9 1190 195 42 0 0 chr15 79400329 79400353 -24094621 + (GGGAGA)n Simple_repeat Simple_repeat 2 25 0 9 1190 382 249 2 0 chr15 79400509 79400597 -24094377 + PB1D10 SINE Alu 25 111 -6 9 1190 346 317 0 0 chr15 79400677 79400759 -24094215 - ID4 SINE ID 0 83 2 9 1190 586 194 331 0 chr15 79400781 79400941 -24094033 - B3 SINE B2 -3 213 1 9 1190 889 241 77 0 chr15 79401106 79401301 -24093673 + B4A SINE B4 83 292 0 9 1190 648 137 8 64 chr15 79401550 79401675 -24093299 + B1_Mur3 SINE Alu 30 147 -2 9 1190 625 280 20 30 chr15 79401719 79401918 -24093056 - B3A SINE B2 0 198 2 9 1190 461 257 58 26 chr15 79401976 79402132 -24092842 + L1M4 LINE L1 3740 3900 -2246 9 1190 435 295 0 0 chr15 79402484 79402589 -24092385 - B3A SINE B2 -93 105 1 9 1190 276 53 0 0 chr15 79402716 79402754 -24092220 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 9 1190 638 333 33 11 chr15 79402958 79403234 -24091740 - B4A SINE B4 0 292 11 9 1190 776 128 0 8 chr15 79403269 79403395 -24091579 - B1_Mus2 SINE Alu -1 146 22 9 1190 300 120 0 0 chr15 79403433 79403483 -24091491 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 1190 432 157 0 0 chr15 79403566 79403636 -24091338 - B3A SINE B2 -127 71 2 9 1190 213 362 17 20 chr15 79403724 79403875 -24091099 + L2c LINE L2 2961 3118 -269 9 1190 850 186 0 20 chr15 79404228 79404376 -24090598 + B1_Mur2 SINE Alu 5 149 0 9 1190 24 0 0 0 chr15 79404376 79404400 -24090574 + AT_rich Low_complexity Low_complexity 1 24 0 9 1190 2861 148 52 6 chr15 79405232 79405716 -24089258 + RLTR19C LTR ERVK 1 506 0 9 1190 189 121 0 0 chr15 79406783 79406816 -24088158 + (TTG)n Simple_repeat Simple_repeat 1 33 0 9 1190 382 181 28 0 chr15 79406859 79406939 -24088035 + MTC LTR MaLR 17 98 -309 9 1190 527 184 20 0 chr15 79406941 79407039 -24087935 + B1_Mm SINE Alu 3 102 -45 9 1190 180 111 0 0 chr15 79407147 79407174 -24087800 + (GGGTG)n Simple_repeat Simple_repeat 3 29 0 9 1190 242 333 0 13 chr15 79408793 79408869 -24086105 - BC1_Mm scRNA scRNA -64 88 14 9 1190 1056 191 18 58 chr15 79409054 79409277 -24085697 + B3 SINE B2 3 216 0 9 1190 2314 26 4 0 chr15 79409725 79409995 -24084979 + L1Md_F2 LINE L1 6311 6581 -1 9 1190 1130 95 0 13 chr15 79410044 79410193 -24084781 - B1_Mus1 SINE Alu 0 148 2 9 1190 1111 106 0 12 chr15 79410196 79410368 -24084606 - B2_Mm2 SINE B2 -24 171 2 9 1190 435 274 24 71 chr15 79410396 79410522 -24084452 - PB1D9 SINE Alu 0 120 1 9 1190 787 200 14 7 chr15 79410554 79410700 -24084274 - B1_Mur1 SINE Alu 0 149 3 9 1190 418 279 38 15 chr15 79410700 79410831 -24084143 + L1MC4 LINE L1 7370 7503 -539 9 1190 417 283 47 0 chr15 79410836 79410942 -24084032 + RSINE1 SINE B4 1 111 -54 9 1190 201 74 0 0 chr15 79410942 79410969 -24084005 + (TG)n Simple_repeat Simple_repeat 2 28 0 9 1190 225 270 68 0 chr15 79410998 79411067 -24083907 + L1MC4 LINE L1 7506 7579 -463 9 1190 656 241 90 6 chr15 79411067 79411234 -24083740 + B3A SINE B2 2 182 -16 9 1190 503 310 78 19 chr15 79411284 79411606 -24083368 + L1MC4 LINE L1 7562 7902 -140 9 1190 1046 129 0 6 chr15 79411744 79411902 -24083072 + B2_Mm2 SINE B2 2 159 -36 9 1190 414 0 0 0 chr15 79411902 79411948 -24083026 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 9 1190 2317 140 42 3 chr15 79411959 79412338 -24082636 - ORR1B1 LTR MaLR 0 394 1 9 1190 225 226 0 0 chr15 79412377 79412430 -24082544 + GA-rich Low_complexity Low_complexity 5 57 0 9 1190 8117 55 4 4 chr15 79412546 79413686 -24081288 + L1_Mus1 LINE L1 5425 6566 -1 9 1190 22 35 0 0 chr15 79414046 79414075 -24080899 + AT_rich Low_complexity Low_complexity 1 29 0 9 1190 751 243 105 11 chr15 79414116 79414145 -24080829 - B3 SINE B2 -7 209 168 9 1190 393 22 0 0 chr15 79414145 79414191 -24080783 + (TATG)n Simple_repeat Simple_repeat 3 48 0 9 1190 751 243 105 11 chr15 79414191 79414352 -24080622 - B3 SINE B2 -49 167 2 9 1190 928 138 27 14 chr15 79414938 79415085 -24079889 - B1_Mur3 SINE Alu 0 149 1 9 1190 28 0 0 0 chr15 79415085 79415113 -24079861 + AT_rich Low_complexity Low_complexity 1 28 0 9 1190 238 275 14 28 chr15 79415784 79415855 -24079119 + ID4_ SINE ID 5 74 -9 9 1190 21 57 0 0 chr15 79416416 79416451 -24078523 + AT_rich Low_complexity Low_complexity 1 35 0 9 1190 180 0 0 0 chr15 79416779 79416799 -24078175 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 9 1190 189 74 0 0 chr15 79417078 79417105 -24077869 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 9 1190 782 148 66 7 chr15 79417116 79417252 -24077722 - B1_Mus2 SINE Alu -1 146 3 9 1190 183 80 0 0 chr15 79418242 79418267 -24076707 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 9 1190 757 160 120 0 chr15 79418541 79418666 -24076308 - B1_Mus2 SINE Alu -7 140 1 9 1190 1966 148 90 50 chr15 79419440 79419763 -24075211 + ORR1B1 LTR MaLR 1 349 -45 1 1190 1127 60 0 0 chr15 79419763 79419897 -24075077 + B1_Mus2 SINE Alu 2 135 -12 1 1190 183 80 0 0 chr15 79419898 79419923 -24075051 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 1190 1966 148 90 50 chr15 79419923 79419975 -24074999 + ORR1B1 LTR MaLR 350 393 -1 1 1190 219 69 0 0 chr15 79420174 79420203 -24074771 + (TATG)n Simple_repeat Simple_repeat 3 31 0 1 1190 840 162 27 34 chr15 79420303 79420450 -24074524 - B1_Mur1 SINE Alu -1 148 3 1 1190 850 297 9 5 chr15 79420451 79420664 -24074310 - B4A SINE B4 -77 215 2 1 1190 518 221 227 22 chr15 79420688 79420873 -24074101 - ID_B1 SINE B4 0 224 2 1 1190 304 270 99 47 chr15 79420900 79420915 -24074059 - MIR SINE MIR -49 213 200 1 1190 252 0 0 0 chr15 79420915 79420943 -24074031 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1190 304 270 99 47 chr15 79420943 79421098 -24073876 - MIR SINE MIR -63 199 35 1 1190 23 54 0 0 chr15 79421269 79421306 -24073668 + AT_rich Low_complexity Low_complexity 1 37 0 1 1190 755 190 27 40 chr15 79421307 79421455 -24073519 + B1_Mur1 SINE Alu 3 148 -1 1 1190 565 197 74 68 chr15 79421484 79421647 -24073327 - RSINE1 SINE B4 0 165 2 1 1190 316 300 12 0 chr15 79422157 79422237 -24072737 + ID2 SINE ID 2 82 -1 1 1190 689 131 57 0 chr15 79422522 79422644 -24072330 + B2_Mm2 SINE B2 2 130 -65 1 1190 366 23 0 0 chr15 79422664 79422707 -24072267 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 1 1190 1340 78 44 0 chr15 79422827 79423007 -24071967 - B2_Mm2 SINE B2 -4 191 4 1 1190 330 233 209 0 chr15 79423105 79423191 -24071783 + PB1D9 SINE Alu 1 104 -16 1 1190 501 189 195 8 chr15 79423680 79423803 -24071171 + B1_Mur2 SINE Alu 3 148 -1 1 1190 694 167 43 50 chr15 79424185 79424324 -24070650 - B1_Mur1 SINE Alu -6 143 6 1 1190 560 285 87 34 chr15 79424324 79424392 -24070582 - ID_B1 SINE B4 -6 218 1 1 1190 550 149 0 0 chr15 79424764 79424851 -24070123 - MTD LTR MaLR -2 417 331 1 1190 623 203 0 0 chr15 79424867 79424985 -24069989 - B1_Mur4 SINE Alu -1 149 32 1 1190 1218 42 0 0 chr15 79425094 79425236 -24069738 + B1_Mus1 SINE Alu 1 142 -6 1 1190 450 0 0 0 chr15 79425238 79425288 -24069686 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1 1190 23 33 0 0 chr15 79425586 79425616 -24069358 + AT_rich Low_complexity Low_complexity 1 30 0 1 1190 1174 75 0 0 chr15 79426024 79426171 -24068803 + B1_Mus1 SINE Alu 2 148 0 1 1190 708 98 0 0 chr15 79426176 79426278 -24068696 + (GGGGA)n Simple_repeat Simple_repeat 5 106 0 1 1190 1503 68 5 0 chr15 79426430 79426621 -24068353 + B2_Mm1t SINE B2 2 193 0 1 1190 890 191 64 87 chr15 79426901 79427119 -24067855 + B3 SINE B2 1 213 -3 1 1190 23 0 0 0 chr15 79427120 79427143 -24067831 + AT_rich Low_complexity Low_complexity 1 23 0 1 1190 226 0 29 29 chr15 79427509 79427544 -24067430 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1190 1195 42 0 7 chr15 79427544 79427689 -24067285 - B1_Mus2 SINE Alu -2 145 2 1 1190 952 281 17 27 chr15 79427838 79428131 -24066843 + B4A SINE B4 3 292 0 1 1190 483 285 52 85 chr15 79428144 79428355 -24066619 + B4 SINE B4 1 204 -88 1 1190 590 133 38 0 chr15 79428282 79428387 -24066587 + B1_Mur4 SINE Alu 41 149 -1 1 1190 437 252 63 184 chr15 79428420 79428610 -24066364 + B4 SINE B4 126 292 0 1 1190 250 250 128 23 chr15 79428664 79428750 -24066224 + RSINE1 SINE B4 3 97 -68 1 1190 1470 73 10 0 chr15 79428752 79428944 -24066030 + B2_Mm2 SINE B2 2 195 0 1 1190 333 0 0 0 chr15 79429005 79429042 -24065932 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1190 873 156 0 39 chr15 79429055 79429209 -24065765 + B1_Mus1 SINE Alu 1 148 0 1 1191 1248 14 0 0 chr15 79429716 79429855 -24065119 - B1_Mm SINE Alu -8 139 1 1 1191 319 202 124 12 chr15 79431311 79431414 -24063560 + MER20 DNA MER1_type 1 126 -93 1 1191 637 225 146 0 chr15 79432285 79432463 -24062511 - B3 SINE B2 -10 206 3 1 1191 264 296 25 0 chr15 79432560 79432641 -24062333 + ID4 SINE ID 1 83 0 1 1191 998 149 0 0 chr15 79432968 79433116 -24061858 - B1_Mus1 SINE Alu 0 148 1 1 1191 1780 166 67 18 chr15 79433125 79433511 -24061463 - MTD LTR MaLR -14 405 1 1 1191 2810 216 23 15 chr15 79433516 79434114 -24060860 + Lx5 LINE L1 6443 7045 -5 1 1191 1309 73 67 0 chr15 79434280 79434459 -24060515 - B2_Mm2 SINE B2 0 195 5 1 1191 286 155 0 0 chr15 79434467 79434525 -24060449 - B1_Mur4 SINE Alu 0 150 93 1 1191 377 280 9 53 chr15 79434646 79434759 -24060215 - B1_Mur2 SINE Alu -1 148 41 1 1191 342 225 0 12 chr15 79434787 79434871 -24060103 - ID_B1 SINE B4 -66 158 80 1 1191 200 253 0 46 chr15 79435567 79435654 -24059320 + (CTGGGG)n Simple_repeat Simple_repeat 5 87 0 1 1191 888 62 148 0 chr15 79436507 79436635 -24058339 + B1_Mus2 SINE Alu 1 147 0 1 1191 358 284 118 0 chr15 79437078 79437205 -24057769 + L1M4 LINE L1 4910 5051 -1095 1 1191 560 47 35 12 chr15 79437232 79437318 -24057656 - B2_Mm2 SINE B2 -5 190 103 1 1191 1343 94 15 30 chr15 79437331 79437529 -24057445 + B2_Mm2 SINE B2 1 195 0 1 1191 858 224 24 0 chr15 79437565 79437735 -24057239 - B3 SINE B2 -5 211 38 1 1191 484 231 51 8 chr15 79437776 79437894 -24057080 - B3 SINE B2 -12 204 82 1 1191 757 78 8 33 chr15 79437960 79438080 -24056894 + B1_Mus1 SINE Alu 26 142 -6 1 1191 549 0 0 0 chr15 79438081 79438142 -24056832 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 1 1191 758 162 215 5 chr15 79438952 79439138 -24055836 - URR1B DNA MER1_type 0 225 1 1 1191 213 154 0 0 chr15 79439173 79439212 -24055762 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1191 570 132 15 7 chr15 79439269 79439406 -24055568 + CT-rich Low_complexity Low_complexity 3 140 0 1 1191 512 252 0 0 chr15 79439406 79439517 -24055457 - PB1D9 SINE Alu -5 115 5 1 1191 829 114 8 0 chr15 79439687 79439819 -24055155 - B1_Mus1 SINE Alu 0 148 16 1 1191 6025 137 62 63 chr15 79439839 79440954 -24054020 + RLTR13D3 LTR ERVK 1 1114 0 1 1191 219 114 0 0 chr15 79440995 79441030 -24053944 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1191 200 296 42 0 chr15 79441056 79441127 -24053847 - L2c LINE L2 -165 3222 3149 1 1191 180 0 0 0 chr15 79441909 79441929 -24053045 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1191 1134 75 0 20 chr15 79441929 79442079 -24052895 - B1_Mus2 SINE Alu 0 147 1 1 1191 233 264 0 19 chr15 79442194 79442248 -24052726 + ID4_ SINE ID 27 79 -4 1 1191 1048 84 28 7 chr15 79442270 79442414 -24052560 + B1_Mus1 SINE Alu 1 147 -1 1 1191 304 211 28 0 chr15 79442535 79442606 -24052368 - PB1D9 SINE Alu -28 92 20 1 1191 913 118 52 0 chr15 79443254 79443389 -24051585 + B1_Mur3 SINE Alu 2 143 -6 1 1191 689 277 6 0 chr15 79443488 79443647 -24051327 - B3 SINE B2 -4 212 53 1 1191 505 289 152 45 chr15 79443913 79444156 -24050818 - B4 SINE B4 -16 276 8 1 1191 2457 75 6 53 chr15 79444283 79444385 -24050589 + ORR1A3 LTR MaLR 5 106 -220 1 1191 1695 26 0 0 chr15 79444385 79444577 -24050397 + B2_Mm1t SINE B2 2 193 0 1 1191 2457 75 6 53 chr15 79444577 79444812 -24050162 + ORR1A3 LTR MaLR 107 326 0 1 1191 202 270 110 0 chr15 79446174 79446274 -24048700 - L2c LINE L2 -177 3210 3100 1 1191 1385 140 3 175 chr15 79446633 79446970 -24048004 + RLTR23 LTR ERV1 152 430 0 1 1191 657 286 73 0 chr15 79447375 79447567 -24047407 + B3 SINE B2 1 206 -10 1 1191 210 175 0 0 chr15 79448367 79448407 -24046567 - B1_Mus2 SINE Alu -8 139 100 1 1191 1535 22 55 0 chr15 79448432 79448614 -24046360 - B2_Mm1a SINE B2 0 193 2 1 1191 1280 41 0 0 chr15 79448616 79448763 -24046211 - B1_Mus1 SINE Alu 0 148 2 1 1191 267 284 239 0 chr15 79448959 79449130 -24045844 + MIR SINE MIR 45 254 -8 1 1191 978 204 71 0 chr15 79449323 79449519 -24045455 + B3 SINE B2 1 210 -6 1 1191 955 36 0 0 chr15 79449540 79449652 -24045322 + B2_Mm2 SINE B2 1 112 -83 1 1191 342 0 0 0 chr15 79449673 79449711 -24045263 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1 1191 247 200 0 20 chr15 79449754 79449805 -24045169 + PB1 SINE Alu 52 101 -26 1 1191 426 167 0 0 chr15 79449805 79449889 -24045085 + (CA)n Simple_repeat Simple_repeat 1 84 0 1 1191 713 12 0 11 chr15 79449930 79450017 -24044957 + (TTTC)n Simple_repeat Simple_repeat 1 86 0 1 1191 1148 44 0 0 chr15 79450018 79450153 -24044821 - B1_Mus1 SINE Alu -13 135 1 1 1191 484 140 262 0 chr15 79450893 79451000 -24043974 - B1_Mm SINE Alu -8 139 5 1 1191 580 173 87 0 chr15 79451800 79451904 -24043070 - PB1D9 SINE Alu -7 113 1 1 1191 221 75 25 0 chr15 79451916 79451956 -24043018 + (TTG)n Simple_repeat Simple_repeat 3 43 0 1 1191 340 274 103 9 chr15 79451956 79452063 -24042911 - PB1D10 SINE Alu 0 117 1 1 1191 390 287 138 15 chr15 79452076 79452246 -24042728 + ID_B1 SINE B4 85 279 -13 1 1191 418 255 38 0 chr15 79452337 79452443 -24042531 + PB1D7 SINE Alu 1 110 -10 1 1191 1222 156 26 35 chr15 79452479 79452705 -24042269 + URR1B DNA MER1_type 1 224 -1 1 1191 784 186 57 0 chr15 79453097 79453237 -24041737 + B1_Mur1 SINE Alu 1 148 -1 1 1191 280 280 31 123 chr15 79453305 79453468 -24041506 - MIR SINE MIR -113 149 2 1 1191 876 248 97 111 chr15 79454099 79454440 -24040534 + MTE2b LTR MaLR 1 336 -43 1 1191 819 177 8 0 chr15 79455192 79455322 -24039652 - B1_Mus1 SINE Alu -17 131 1 1 1191 870 239 17 17 chr15 79455470 79455649 -24039325 + B3A SINE B2 4 182 -16 1 1191 234 0 0 0 chr15 79455653 79455679 -24039295 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1191 4685 147 10 74 chr15 79455694 79456614 -24038360 - RLTR13A3 LTR ERVK 0 978 118 1 1191 195 300 129 52 chr15 79456960 79457076 -24037898 - L2c LINE L2 -5 3382 3258 1 1191 4714 157 12 58 chr15 79457418 79458370 -24036604 + RMER13B LTR ERVK 1 908 0 1 1191 835 228 10 63 chr15 79458452 79458658 -24036316 + B3A SINE B2 4 198 0 1 1191 855 216 108 5 chr15 79458668 79458863 -24036111 + B3 SINE B2 2 216 0 1 1191 340 291 23 0 chr15 79459190 79459276 -24035698 + B1_Mur2 SINE Alu 11 98 -51 1 1191 234 0 0 0 chr15 79459288 79459314 -24035660 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1191 1194 41 7 0 chr15 79459461 79459606 -24035368 + B1_Mus2 SINE Alu 2 147 0 1 1191 246 32 0 0 chr15 79459610 79459641 -24035333 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1191 817 237 5 40 chr15 79459739 79459941 -24035033 + B3A SINE B2 3 197 -1 1 1191 674 78 10 0 chr15 79459950 79460052 -24034922 + (TG)n Simple_repeat Simple_repeat 2 104 0 1 1191 350 341 71 53 chr15 79460871 79461097 -24033877 - MLT1J LTR MaLR -49 463 234 1 1191 650 269 139 65 chr15 79461098 79461480 -24033494 + RLTR11B LTR ERVK 1 410 -43 1 1191 581 264 86 83 chr15 79461676 79461978 -24032996 + L1_Rod LINE L1 5415 5717 -130 1 1191 236 213 8 71 chr15 79462139 79462214 -24032760 + L2a LINE L2 3021 3097 -290 1 1191 1840 131 173 3 chr15 79462216 79462546 -24032428 + ORR1B1 LTR MaLR 1 386 -8 1 1191 678 299 29 34 chr15 79462748 79462956 -24032018 - B4 SINE B4 -78 214 8 1 1191 192 250 42 0 chr15 79463662 79463710 -24031264 - L2a LINE L2 -84 3342 3293 1 1191 243 0 0 0 chr15 79464935 79464962 -24030012 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1191 760 132 139 8 chr15 79464962 79465084 -24029890 - B1_Mur2 SINE Alu -10 139 2 1 1191 600 252 35 0 chr15 79465115 79465258 -24029716 - B1F2 SINE Alu -1 148 1 1 1191 1050 204 19 14 chr15 79465286 79465495 -24029479 + B3 SINE B2 1 210 -6 1 1191 457 246 0 12 chr15 79466361 79466469 -24028505 - B1F2 SINE Alu -8 112 10 1 1191 235 240 9 53 chr15 79467900 79467960 -24027014 - PB1 SINE Alu -1 148 89 1 1191 1431 74 0 6 chr15 79467960 79468137 -24026837 + B2_Mm2 SINE B2 2 177 -18 1 1191 229 305 26 152 chr15 79468137 79468154 -24026820 - B1F SINE Alu -56 93 84 1 1191 1272 27 0 0 chr15 79468154 79468300 -24026674 - B1_Mm SINE Alu 0 147 2 1 1191 234 183 8 47 chr15 79468300 79468373 -24026601 - PB1D10 SINE Alu -66 83 16 1 1191 383 174 12 0 chr15 79468377 79468463 -24026511 + CT-rich Low_complexity Low_complexity 5 91 0 1 1191 291 244 62 25 chr15 79468465 79468545 -24026429 - ID4_ SINE ID 0 83 1 1 1191 637 231 0 0 chr15 79468720 79468841 -24026133 - B3 SINE B2 -95 121 1 1 1191 1129 207 14 9 chr15 79468906 79469121 -24025853 + B3 SINE B2 1 216 0 1 1191 266 321 68 8 chr15 79469217 79469349 -24025625 + B1F SINE Alu 5 144 -5 1 1191 332 169 0 13 chr15 79469350 79469428 -24025546 + (CATA)n Simple_repeat Simple_repeat 2 78 0 1 1191 717 241 20 175 chr15 79469633 79469722 -24025252 + B3 SINE B2 1 46 -170 1 1191 1277 34 0 0 chr15 79469722 79469868 -24025106 - B1_Mm SINE Alu 0 147 2 1 1191 717 241 20 175 chr15 79469868 79470029 -24024945 + B3 SINE B2 47 212 -4 1 1191 776 228 10 54 chr15 79470031 79470235 -24024739 + B2_Mm2 SINE B2 1 195 0 1 1191 249 284 49 12 chr15 79471350 79471432 -24023542 - MIRc SINE MIR -131 137 53 1 1191 214 182 23 0 chr15 79471753 79471797 -24023177 + G-rich Low_complexity Low_complexity 1 45 0 1 1191 449 235 46 77 chr15 79472046 79472231 -24022743 + MTEa LTR MaLR 158 372 -7 1 1191 283 197 131 0 chr15 79472388 79472449 -24022525 + RSINE1 SINE B4 1 69 -96 1 1191 662 253 62 49 chr15 79472811 79472973 -24022001 + RSINE1 SINE B4 2 165 0 1 1191 23 0 0 0 chr15 79472973 79472996 -24021978 + AT_rich Low_complexity Low_complexity 1 23 0 1 1191 314 218 12 82 chr15 79473083 79473168 -24021806 - ID4_ SINE ID -2 81 3 1 1191 241 26 53 0 chr15 79473661 79473699 -24021275 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 1 1191 222 91 0 0 chr15 79474172 79474205 -24020769 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 1 1191 274 335 7 7 chr15 79474211 79474330 -24020644 + ID4 SINE ID 8 126 -26 1 1191 207 292 31 0 chr15 79474766 79474831 -24020143 + MIRb SINE MIR 139 205 -63 1 1191 1535 44 22 0 chr15 79475354 79475536 -24019438 + B2_Mm1a SINE B2 1 186 -7 1 1191 537 92 0 0 chr15 79475593 79475669 -24019305 + (GA)n Simple_repeat Simple_repeat 2 77 0 1 1191 555 267 122 0 chr15 79475696 79475827 -24019147 + RSINE1 SINE B4 2 148 -17 1 1191 534 54 0 0 chr15 79475833 79475907 -24019067 + (TC)n Simple_repeat Simple_repeat 1 74 0 1 1191 246 32 0 0 chr15 79475907 79475937 -24019037 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1191 1191 232 96 58 chr15 79476004 79476180 -24018794 + MTD LTR MaLR 11 210 -209 1 1191 890 167 150 0 chr15 79476180 79476360 -24018614 + B3 SINE B2 2 208 -8 1 1191 1191 232 96 58 chr15 79476360 79476577 -24018397 + MTD LTR MaLR 211 419 0 1 1191 665 243 32 33 chr15 79476636 79476817 -24018157 + B3A SINE B2 20 196 -2 1 1191 1085 135 0 0 chr15 79476826 79476974 -24018000 + B1_Mur4 SINE Alu 1 148 -2 1 1191 947 82 0 0 chr15 79477203 79477325 -24017649 - B2_Mm2 SINE B2 -71 124 3 1 1191 582 253 133 20 chr15 79477325 79477629 -24017345 - MTE2b LTR MaLR -24 395 16 1 1191 302 307 46 79 chr15 79477654 79477677 -24017297 + B4 SINE B4 77 111 -181 1 1191 612 186 76 15 chr15 79477677 79477688 -24017286 + B1_Mm SINE Alu 9 22 -125 1 1191 453 19 0 0 chr15 79477688 79477742 -24017232 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1191 302 307 46 79 chr15 79477742 79477859 -24017115 + B4 SINE B4 112 223 -69 1 1191 766 332 122 14 chr15 79477871 79478533 -24016441 + L1MC1 LINE L1 5354 6087 -246 1 1191 295 281 169 15 chr15 79478609 79478804 -24016170 + L1MC1 LINE L1 6091 6315 -18 1 1191 529 258 115 5 chr15 79478814 79479005 -24015969 + B3 SINE B2 1 212 -4 1 1191 824 114 15 30 chr15 79479719 79479854 -24015120 + B1_Mur3 SINE Alu 17 149 0 1 1191 1051 62 0 1 chr15 79480641 79480785 -24014189 - B1_Mus1 SINE Alu 0 148 4 1 1191 226 238 48 0 chr15 79480915 79480978 -24013996 - PB1D9 SINE Alu -2 118 53 1 1191 503 155 12 138 chr15 79481195 79481362 -24013612 + B1F1 SINE Alu 2 129 -20 1 1191 2676 160 76 13 chr15 79481362 79481790 -24013184 + RLTR20B2 LTR ERVK 3 464 -96 1 1191 333 0 0 0 chr15 79481790 79481827 -24013147 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1191 2676 160 76 13 chr15 79481827 79481923 -24013051 + RLTR20B2 LTR ERVK 465 560 0 1 1191 802 272 6 6 chr15 79482000 79482181 -24012793 + B3A SINE B2 2 182 -16 1 1191 321 270 100 11 chr15 79482260 79482350 -24012624 + RSINE1 SINE B4 62 159 -6 1 1191 23 33 0 0 chr15 79482355 79482385 -24012589 + AT_rich Low_complexity Low_complexity 1 30 0 1 1191 672 236 50 47 chr15 79482405 79482591 -24012383 + B3A SINE B2 5 188 -7 1 1191 1361 85 26 11 chr15 79482652 79482842 -24012132 - B2_Mm2 SINE B2 -1 194 2 1 1191 619 159 47 0 chr15 79482848 79482955 -24012019 - PB1D9 SINE Alu -6 114 3 1 1191 1258 48 0 0 chr15 79483048 79483194 -24011780 - B1_Mm SINE Alu 0 147 2 1 1191 761 274 16 11 chr15 79483477 79483665 -24011309 + B3A SINE B2 5 193 -5 1 1191 1321 70 41 46 chr15 79483930 79484124 -24010850 - B2_Mm2 SINE B2 -1 194 2 1 1191 807 161 0 0 chr15 79484194 79484374 -24010600 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1191 1194 22 0 0 chr15 79485043 79485177 -24009797 + B1_Mus2 SINE Alu 2 135 -12 1 1191 350 0 0 43 chr15 79485178 79485225 -24009749 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 1 1191 479 277 27 34 chr15 79485243 79485389 -24009585 - RSINE1 SINE B4 -17 148 4 1 1191 448 186 128 0 chr15 79485719 79485805 -24009169 + RLTR18B LTR ERVK 1 97 -415 1 1191 262 79 0 26 chr15 79485805 79485844 -24009130 + B2_Mm2 SINE B2 4 41 -154 1 1191 965 81 0 0 chr15 79485844 79485968 -24009006 + B1_Mus2 SINE Alu 1 124 -23 1 1191 1051 120 44 0 chr15 79486044 79486202 -24008772 + B2_Mm2 SINE B2 27 191 -4 1 1191 592 218 56 73 chr15 79486189 79486367 -24008607 + RLTR18B LTR ERVK 80 254 -258 1 1191 1504 204 18 40 chr15 79486355 79486682 -24008292 + RLTR18B LTR ERVK 190 509 -3 1 1191 189 383 60 60 chr15 79487283 79487433 -24007541 - L2c LINE L2 -7 3368 3219 1 1191 716 112 17 25 chr15 79487551 79487670 -24007304 - B1F2 SINE Alu 0 149 32 1 1191 199 283 17 0 chr15 79487709 79487769 -24007205 - L2c LINE L2 -271 3116 3056 1 1191 516 214 8 33 chr15 79488000 79488121 -24006853 + PB1D9 SINE Alu 2 119 -1 1 1191 1693 21 0 15 chr15 79488127 79488322 -24006652 + B2_Mm1a SINE B2 1 192 -1 1 1191 253 175 70 0 chr15 79488348 79488405 -24006569 + B4A SINE B4 85 145 -147 1 1191 324 183 171 0 chr15 79488359 79488441 -24006533 + PB1D10 SINE Alu 14 109 -8 1 1191 1031 46 46 0 chr15 79488508 79488639 -24006335 + B1_Mus1 SINE Alu 1 137 -11 1 1191 384 71 0 0 chr15 79488639 79488695 -24006279 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 1 1191 251 258 15 29 chr15 79489934 79490002 -24004972 - Charlie24 DNA MER1_type -3 2447 2381 1 1191 233 240 110 29 chr15 79490075 79490180 -24004794 + MIRb SINE MIR 128 240 -28 1 1191 461 210 315 0 chr15 79490220 79490382 -24004592 + B3 SINE B2 3 215 -1 1 1191 522 269 109 109 chr15 79490587 79490684 -24004290 + B4A SINE B4 1 89 -203 1 1191 1240 27 0 13 chr15 79490684 79490833 -24004141 + B1_Mus2 SINE Alu 1 147 0 1 1191 522 269 109 109 chr15 79490833 79491019 -24003955 + B4A SINE B4 90 284 -8 1 1191 304 227 67 22 chr15 79491552 79491642 -24003332 + MIRb SINE MIR 168 261 -7 1 1191 702 197 48 27 chr15 79492198 79492344 -24002630 + B1_Mur3 SINE Alu 1 149 0 1 1191 1035 197 14 5 chr15 79492358 79492572 -24002402 + B3 SINE B2 1 216 0 1 1191 796 170 7 28 chr15 79492578 79492723 -24002251 - B1_Mur4 SINE Alu -4 146 5 1 1191 837 175 76 0 chr15 79493522 79493693 -24001281 - B2_Mm2 SINE B2 -11 184 1 1 1191 425 202 80 10 chr15 79493958 79494058 -24000916 + PB1D10 SINE Alu 3 109 -8 1 1191 251 188 42 0 chr15 79494119 79494165 -24000809 + B4 SINE B4 48 95 -197 1 1191 723 261 25 0 chr15 79494165 79494326 -24000648 + B3 SINE B2 2 166 -50 1 1191 892 96 7 7 chr15 79494327 79494474 -24000500 + (CA)n Simple_repeat Simple_repeat 2 148 0 1 1191 22 35 0 0 chr15 79494478 79494507 -24000467 + AT_rich Low_complexity Low_complexity 1 29 0 1 1191 344 210 12 47 chr15 79494559 79494644 -24000330 + B4 SINE B4 128 209 -83 1 1191 635 268 0 7 chr15 79494842 79494981 -23999993 - B1_Mur3 SINE Alu -10 139 2 1 1191 343 211 11 16 chr15 79495000 79495087 -23999887 + B4 SINE B4 225 276 -16 1 1191 297 0 0 0 chr15 79495093 79495126 -23999848 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1191 372 261 11 11 chr15 79495268 79495361 -23999613 - L2a LINE L2 -224 3202 3110 1 1191 246 128 0 0 chr15 79495393 79495432 -23999542 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1191 791 141 78 0 chr15 79495802 79495930 -23999044 + B1_Mur2 SINE Alu 12 149 0 1 1191 1692 36 0 0 chr15 79498342 79498535 -23996439 + B2_Mm1t SINE B2 1 193 0 1 1191 648 257 21 0 chr15 79499101 79499245 -23995729 - RSINE1 SINE B4 -14 151 5 1 1191 721 153 0 44 chr15 79499412 79499549 -23995425 - B1_Mus2 SINE Alu 0 147 17 1 1191 381 213 102 85 chr15 79499457 79499575 -23995399 - MT2B LTR ERVL -337 264 145 1 1191 265 306 28 0 chr15 79499928 79499947 -23995027 + B4 SINE B4 65 138 -154 1 1191 288 208 0 0 chr15 79499947 79500000 -23994974 + PB1D9 SINE Alu 1 53 -67 1 1191 555 204 299 0 chr15 79500096 79500253 -23994721 + ID_B1 SINE B4 12 215 -9 1 1191 983 82 75 0 chr15 79500318 79500452 -23994522 + B1_Mus2 SINE Alu 2 145 -2 2 1191 258 220 136 0 chr15 79500457 79500516 -23994458 + RSINE1 SINE B4 28 94 -71 3 1191 611 136 148 23 chr15 79500516 79500644 -23994330 - RLTR14 LTR ERV1 0 382 239 4 1191 290 51 0 0 chr15 79500674 79500713 -23994261 - RLTR14 LTR ERV1 -343 39 1 4 1191 641 97 174 9 chr15 79500769 79500884 -23994090 + B1_Mur4 SINE Alu 10 143 -7 5 1191 1274 27 0 0 chr15 79500887 79501034 -23993940 + B1_Mus2 SINE Alu 1 147 0 6 1191 26 0 0 0 chr15 79501034 79501060 -23993914 + AT_rich Low_complexity Low_complexity 1 26 0 7 1191 1645 31 0 20 chr15 79501878 79502074 -23992900 - B2_Mm1a SINE B2 -1 192 1 8 1191 719 199 28 7 chr15 79503487 79503629 -23991345 - B1_Mus1 SINE Alu 0 148 4 9 1191 948 102 80 0 chr15 79503947 79504084 -23990890 - B1_Mus1 SINE Alu 0 148 1 1 1191 406 288 28 14 chr15 79506941 79507082 -23987892 + RSINE1 SINE B4 23 165 0 1 1191 481 163 18 80 chr15 79507120 79507233 -23987741 + B1_Mm SINE Alu 41 146 -1 1 1191 556 248 27 27 chr15 79508296 79508445 -23986529 + B1F2 SINE Alu 1 149 0 1 1191 520 219 0 0 chr15 79508757 79508862 -23986112 + B1_Mus2 SINE Alu 43 147 0 1 1191 325 232 65 19 chr15 79508877 79509001 -23985973 - B1F1 SINE Alu -12 137 11 1 1191 360 107 0 0 chr15 79509018 79509056 -23985918 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1191 950 95 73 0 chr15 79509056 79509193 -23985781 - B1_Mm SINE Alu 0 147 1 1 1191 360 107 0 0 chr15 79509193 79509210 -23985764 + (T)n Simple_repeat Simple_repeat 1 17 0 1 1191 498 182 0 57 chr15 79509388 79509493 -23985481 - PB1D9 SINE Alu -1 119 21 1 1191 1123 50 50 0 chr15 79509596 79509737 -23985237 + B1_Mus1 SINE Alu 1 148 0 2 1191 246 243 68 0 chr15 79509854 79509928 -23985046 - B4A SINE B4 -213 79 1 2 1191 633 174 35 0 chr15 79509978 79510093 -23984881 + PB1D7 SINE Alu 2 120 0 2 1191 522 269 27 14 chr15 79510119 79510266 -23984708 + B3 SINE B2 67 215 -1 2 1191 317 169 49 0 chr15 79510263 79510333 -23984641 - B1_Mur2 SINE Alu -56 93 20 2 1191 742 216 143 21 chr15 79510355 79510544 -23984430 + B3 SINE B2 2 213 -3 2 1191 1235 125 8 28 chr15 79510565 79510788 -23984186 - B2_Mm2 SINE B2 -1 215 1 2 1191 432 232 101 0 chr15 79510909 79511047 -23983927 - Lx7 LINE L1 -330 7366 7215 2 1191 231 281 138 0 chr15 79511265 79511425 -23983549 + B3A SINE B2 1 182 -16 2 1191 947 111 0 7 chr15 79511761 79511906 -23983068 + B1_Mur4 SINE Alu 7 150 0 2 1191 198 174 0 0 chr15 79511907 79511953 -23983021 + A-rich Low_complexity Low_complexity 1 46 0 3 1191 216 0 0 0 chr15 79512027 79512051 -23982923 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 3 1191 873 168 14 20 chr15 79512067 79512213 -23982761 - B1_Mur3 SINE Alu -2 147 3 3 1191 276 30 0 0 chr15 79512224 79512257 -23982717 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1191 476 321 0 7 chr15 79512284 79512419 -23982555 - ID_B1 SINE B4 -4 220 87 3 1191 375 232 137 0 chr15 79513019 79513114 -23981860 + ID_B1 SINE B4 112 219 -5 3 1191 320 242 211 19 chr15 79513661 79513817 -23981157 - MIRb SINE MIR -20 248 63 3 1191 422 182 0 0 chr15 79514258 79514335 -23980639 + B3 SINE B2 50 126 -90 3 1191 270 301 27 0 chr15 79515469 79515542 -23979432 + MIR SINE MIR 111 185 -77 3 1191 247 227 90 15 chr15 79518932 79518999 -23975975 - ID SINE ID -142 82 11 3 1191 322 284 98 0 chr15 79519790 79519892 -23975082 - MER21B LTR ERV1 -147 716 605 4 1191 436 271 25 8 chr15 79519911 79520030 -23974944 + B3 SINE B2 44 164 -52 4 1191 387 41 0 0 chr15 79520030 79520079 -23974895 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1191 389 277 98 14 chr15 79520079 79520102 -23974872 + B3A SINE B2 166 197 -1 4 1191 28 29 0 0 chr15 79521411 79521446 -23973528 + GC_rich Low_complexity Low_complexity 1 35 0 4 1191 580 179 9 9 chr15 79522082 79522189 -23972785 + RSINE1 SINE B4 2 108 -57 4 1191 21 0 0 0 chr15 79522224 79522245 -23972729 + AT_rich Low_complexity Low_complexity 1 21 0 4 1191 240 323 10 10 chr15 79522470 79522570 -23972404 + MIR SINE MIR 48 147 -115 4 1191 1205 54 0 13 chr15 79522591 79522741 -23972233 + B1_Mus1 SINE Alu 1 148 0 4 1191 585 133 0 0 chr15 79522930 79523020 -23971954 + 5S rRNA rRNA 1 90 -31 4 1191 403 311 19 0 chr15 79523771 79523877 -23971097 - PB1D7 SINE Alu 0 120 13 4 1191 269 213 0 76 chr15 79523892 79523958 -23971016 - MIRc SINE MIR -123 145 85 5 1191 375 250 0 0 chr15 79525597 79525677 -23969297 + PB1D10 SINE Alu 2 81 -36 5 1191 281 316 0 0 chr15 79525861 79525937 -23969037 + ID4 SINE ID 5 80 -3 5 1191 562 121 11 21 chr15 79526392 79526485 -23968489 + B2_Mm1t SINE B2 1 92 -101 5 1191 429 66 0 0 chr15 79526488 79526549 -23968425 + (TAAA)n Simple_repeat Simple_repeat 3 63 0 5 1191 410 228 104 116 chr15 79527141 79527305 -23967669 + B3A SINE B2 29 190 -5 5 1191 860 206 109 9 chr15 79527483 79527694 -23967280 - 7SK RNA RNA -86 245 14 5 1191 444 37 0 0 chr15 79528721 79528775 -23966199 + (TTTC)n Simple_repeat Simple_repeat 3 56 0 5 1191 843 35 0 9 chr15 79528783 79528897 -23966077 - B1_Mus2 SINE Alu -1 146 34 5 1191 462 15 45 0 chr15 79529297 79529364 -23965610 + (TCCCC)n Simple_repeat Simple_repeat 2 71 0 5 1191 245 235 161 23 chr15 79529364 79529394 -23965580 - PB1D7 SINE Alu 0 120 91 6 1191 1549 52 16 0 chr15 79529394 79529585 -23965389 - B2_Mm2 SINE B2 0 195 2 6 1191 267 205 6 18 chr15 79529585 79529642 -23965332 - PB1D10 SINE Alu -30 90 21 6 1191 2134 16 545 0 chr15 79530250 79530569 -23964405 - MT2_Mm LTR ERVL 0 493 1 6 1191 297 0 0 0 chr15 79530569 79530607 -23964367 - MERVL-int LTR ERVL 0 5485 5448 6 1191 374 167 46 35 chr15 79530607 79530694 -23964280 - ORR1A3-int LTR MaLR -1323 640 553 6 1191 39325 16 14 0 chr15 79530694 79535981 -23958993 - MERVL-int LTR ERVL -125 5360 1 6 1191 4491 14 2 0 chr15 79535981 79536473 -23958501 - MT2_Mm LTR ERVL 0 493 1 6 1191 220 223 257 88 chr15 79537137 79537250 -23957724 + L2b LINE L2 3240 3371 -4 6 1191 574 242 46 13 chr15 79539496 79539647 -23955327 + RSINE1 SINE B4 3 158 -7 6 1191 1036 198 83 0 chr15 79539676 79539868 -23955106 - B3 SINE B2 -6 210 3 6 1191 261 0 0 0 chr15 79539921 79539950 -23955024 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 6 1191 878 141 0 0 chr15 79539950 79540085 -23954889 - B1_Mus1 SINE Alu -3 145 11 6 1191 3091 163 152 103 chr15 79540467 79541313 -23953661 - RMER19B LTR ERVK -14 888 1 6 1191 365 269 11 0 chr15 79541323 79541335 -23953639 + ID_B1 SINE B4 78 171 -53 7 1191 400 210 37 0 chr15 79541335 79541416 -23953558 + B1F SINE Alu 10 93 -56 7 1191 220 250 0 0 chr15 79541614 79541662 -23953312 + RSINE1 SINE B4 3 50 -115 7 1191 590 240 16 0 chr15 79541704 79541825 -23953149 - B3 SINE B2 -67 149 27 7 1191 1087 91 14 0 chr15 79541839 79541982 -23952992 - B1_Mm SINE Alu 0 147 3 7 1191 228 79 0 0 chr15 79541987 79542025 -23952949 - B3 SINE B2 -177 39 2 7 1191 333 189 68 0 chr15 79542264 79542338 -23952636 - ID4_ SINE ID -2 81 3 7 1191 249 321 0 0 chr15 79542349 79542433 -23952541 - B1F SINE Alu 0 149 66 7 1191 1378 87 5 26 chr15 79543100 79543290 -23951684 + B2_Mm1t SINE B2 1 186 -7 7 1191 813 171 27 14 chr15 79543300 79543448 -23951526 + B1_Mur4 SINE Alu 1 150 0 7 1191 950 297 53 35 chr15 79544182 79544521 -23950453 - MT2A LTR ERVL 0 533 189 8 1191 242 314 59 91 chr15 79544534 79544547 -23950427 - B4 SINE B4 -63 229 197 8 1191 586 198 41 0 chr15 79544547 79544668 -23950306 - B1_Mm SINE Alu -8 139 14 8 1191 242 314 59 91 chr15 79544668 79544720 -23950254 - B4 SINE B4 -63 196 50 8 1191 1924 116 89 48 chr15 79545215 79545265 -23949709 - ORR1B1 LTR MaLR -8 386 354 8 1191 1784 67 8 16 chr15 79545265 79545533 -23949441 - L1_Mus2 LINE L1 0 6566 6326 8 1191 1924 116 89 48 chr15 79545533 79545853 -23949121 - ORR1B1 LTR MaLR -41 353 1 8 1191 594 179 80 0 chr15 79545856 79545968 -23949006 - B1_Mus1 SINE Alu -18 130 10 8 1191 231 301 40 14 chr15 79546778 79546852 -23948122 - MIRb SINE MIR -96 172 97 8 1191 306 0 0 0 chr15 79548206 79548240 -23946734 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1191 1222 29 0 0 chr15 79548240 79548377 -23946597 - B1_Mm SINE Alu -10 137 1 8 1191 603 193 18 110 chr15 79549784 79549947 -23945027 - B1F SINE Alu 0 149 2 8 1191 300 202 154 22 chr15 79550769 79550860 -23944114 - HAL1-3A_ME LINE L1 -781 2077 1975 9 1191 262 123 35 0 chr15 79554195 79554252 -23940722 + CT-rich Low_complexity Low_complexity 1 59 0 9 1191 363 44 0 0 chr15 79554912 79554957 -23940017 + (TCCC)n Simple_repeat Simple_repeat 1 45 0 9 1191 1034 237 19 9 chr15 79556367 79556580 -23938394 + B3 SINE B2 2 216 0 9 1191 717 218 0 27 chr15 79560041 79560187 -23934787 - B1_Mus2 SINE Alu 0 147 6 9 1192 762 182 42 0 chr15 79561542 79561685 -23933289 + B1_Mur3 SINE Alu 1 149 0 9 1192 608 226 73 0 chr15 79562592 79562729 -23932245 - B1F SINE Alu -2 147 1 9 1192 2274 105 17 14 chr15 79562783 79563139 -23931835 + RLTR15 LTR ERVK 1 357 -2 9 1192 518 154 0 77 chr15 79563153 79563322 -23931652 + (TATG)n Simple_repeat Simple_repeat 4 159 0 9 1192 549 266 106 166 chr15 79563337 79563431 -23931543 - B4A SINE B4 -6 286 231 9 1192 1113 76 14 0 chr15 79563431 79563576 -23931398 - B1_Mus2 SINE Alu 0 147 1 1 1192 549 266 106 166 chr15 79563576 79563783 -23931191 - B4A SINE B4 -62 230 3 9 1192 775 156 59 0 chr15 79565481 79565616 -23929358 + B1_Mur4 SINE Alu 1 143 -7 1 1192 516 240 77 44 chr15 79566562 79566745 -23928229 - B3A SINE B2 -7 191 3 1 1192 772 163 13 0 chr15 79566757 79566910 -23928064 + (TA)n Simple_repeat Simple_repeat 1 155 0 1 1192 332 148 33 0 chr15 79566921 79566982 -23927992 - B1F SINE Alu -8 141 79 1 1192 280 234 51 13 chr15 79568184 79568262 -23926712 - ID4_ SINE ID -1 82 2 1 1192 869 152 0 6 chr15 79568509 79568681 -23926293 + (CA)n Simple_repeat Simple_repeat 1 171 0 1 1192 309 120 60 0 chr15 79568709 79568759 -23926215 + HAL1-3A_ME LINE L1 1976 2028 -830 1 1192 212 263 0 17 chr15 79568774 79568832 -23926142 - ID2 SINE ID -25 58 2 1 1192 752 156 325 0 chr15 79570712 79570872 -23924102 - B3 SINE B2 0 216 5 1 1192 29 47 0 0 chr15 79572795 79572838 -23922136 + GC_rich Low_complexity Low_complexity 1 43 0 1 1192 21 36 0 0 chr15 79573005 79573033 -23921941 + GC_rich Low_complexity Low_complexity 1 28 0 1 1192 363 206 277 21 chr15 79573493 79573587 -23921387 - PB1D9 SINE Alu 0 120 3 1 1192 252 0 0 0 chr15 79573748 79573776 -23921198 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 1192 1042 70 0 0 chr15 79573919 79574062 -23920912 + B1_Mus1 SINE Alu 6 148 0 1 1192 222 118 0 0 chr15 79574243 79574277 -23920697 + (TTC)n Simple_repeat Simple_repeat 2 35 0 1 1192 27 0 0 0 chr15 79574282 79574309 -23920665 + AT_rich Low_complexity Low_complexity 1 27 0 1 1192 26 0 0 0 chr15 79574377 79574403 -23920571 + AT_rich Low_complexity Low_complexity 1 26 0 1 1192 1648 236 59 27 chr15 79574583 79574988 -23919986 - MTD LTR MaLR 0 419 2 1 1192 247 310 25 0 chr15 79575156 79575250 -23919724 + MIRc SINE MIR 85 177 -91 1 1192 199 289 0 0 chr15 79576594 79576646 -23918328 + MIRm SINE MIR 99 150 -126 1 1192 1381 71 33 0 chr15 79576921 79577104 -23917870 - B2_Mm2 SINE B2 -6 189 1 1 1192 415 224 62 53 chr15 79577151 79577217 -23917757 + B4A SINE B4 160 226 -66 1 1192 947 169 7 0 chr15 79577217 79577365 -23917609 + B1_Mur1 SINE Alu 1 149 0 1 1192 415 224 62 53 chr15 79577365 79577411 -23917563 + B4A SINE B4 227 273 -19 1 1192 304 360 0 0 chr15 79577566 79577680 -23917294 + (CA)n Simple_repeat Simple_repeat 1 114 0 1 1192 204 228 0 0 chr15 79577769 79577826 -23917148 + (ATG)n Simple_repeat Simple_repeat 3 59 0 1 1192 203 203 5 0 chr15 79578161 79578205 -23916769 + MIRm SINE MIR 104 154 -122 1 1192 216 267 0 32 chr15 79578174 79578236 -23916738 + MIRc SINE MIR 121 180 -88 1 1192 619 307 60 42 chr15 79579044 79579309 -23915665 - B4A SINE B4 -22 270 1 1 1192 335 232 179 0 chr15 79579584 79579735 -23915239 + MER68 LTR ERVL 247 424 -139 1 1192 314 264 160 0 chr15 79580419 79580500 -23914474 + B3 SINE B2 86 166 -50 1 1192 231 36 0 0 chr15 79580500 79580528 -23914446 + (CATA)n Simple_repeat Simple_repeat 3 30 0 1 1192 314 264 160 0 chr15 79580528 79580552 -23914422 + B3 SINE B2 167 207 -9 1 1192 804 114 136 0 chr15 79580591 79580723 -23914251 - B1_Mur4 SINE Alu 0 150 1 1 1192 1068 59 67 0 chr15 79580991 79581126 -23913848 + B1_Mus2 SINE Alu 2 145 -2 1 1192 243 0 0 0 chr15 79581131 79581158 -23913816 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1192 282 257 29 0 chr15 79581474 79581544 -23913430 - B1F2 SINE Alu -65 84 13 1 1192 468 69 14 0 chr15 79581546 79581618 -23913356 + L1_Mus2 LINE L1 6494 6566 0 1 1192 1178 55 0 7 chr15 79581676 79581822 -23913152 + B1_Mm SINE Alu 2 146 -1 1 1192 522 0 0 0 chr15 79582138 79582196 -23912778 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 1192 375 121 0 0 chr15 79582203 79582261 -23912713 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1192 757 123 0 0 chr15 79582684 79582806 -23912168 + B1_Mus2 SINE Alu 6 127 -20 1 1192 189 359 57 28 chr15 79583383 79583489 -23911485 + MIRm SINE MIR 165 273 -3 1 1192 452 250 0 0 chr15 79584823 79584923 -23910051 - RLTR18B LTR ERVK -407 105 6 1 1192 436 231 0 18 chr15 79585227 79585390 -23909584 + (TCCA)n Simple_repeat Simple_repeat 4 163 0 1 1192 264 30 0 0 chr15 79585436 79585469 -23909505 + (TTAG)n Simple_repeat Simple_repeat 1 33 0 1 1192 555 161 107 0 chr15 79585470 79585582 -23909392 - B1_Mus2 SINE Alu -6 141 18 1 1192 513 216 37 31 chr15 79585590 79585719 -23909255 - B1F SINE Alu -1 148 17 1 1192 185 301 93 43 chr15 79586398 79586537 -23908437 - MIR SINE MIR -96 166 21 1 1192 315 314 79 31 chr15 79587559 79587731 -23907243 + MIRb SINE MIR 14 198 -70 1 1192 1176 82 0 0 chr15 79588105 79588251 -23906723 + B1_Mus1 SINE Alu 1 146 -2 1 1192 188 67 0 32 chr15 79588251 79588282 -23906692 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 1 1192 843 134 7 53 chr15 79588306 79588456 -23906518 + B1_Mur4 SINE Alu 7 149 -1 1 1192 279 295 151 35 chr15 79588501 79588673 -23906301 + B2_Mm2 SINE B2 1 192 -3 1 1192 363 128 260 21 chr15 79588750 79588846 -23906128 + PB1D10 SINE Alu 1 119 -1 1 1192 573 281 22 0 chr15 79588851 79588990 -23905984 + RSINE1 SINE B4 3 144 -21 1 1192 200 320 0 13 chr15 79589005 79589081 -23905893 + (CA)n Simple_repeat Simple_repeat 1 75 0 1 1192 575 271 35 7 chr15 79589248 79589393 -23905581 + B3A SINE B2 15 163 -35 1 1192 297 0 0 0 chr15 79589682 79589715 -23905259 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1192 562 305 0 19 chr15 79589761 79589918 -23905056 - RSINE1 SINE B4 -10 155 2 1 1192 701 251 98 0 chr15 79589918 79590118 -23904856 - B4A SINE B4 -64 228 9 1 1192 1123 230 124 93 chr15 79590382 79590746 -23904228 - MTE2a LTR MaLR -2 377 3 1 1192 627 191 6 13 chr15 79590880 79591039 -23903935 + GA-rich Low_complexity Low_complexity 1 158 0 1 1192 245 333 33 22 chr15 79595014 79595106 -23899868 + L2a LINE L2 3334 3426 0 1 1192 422 250 12 0 chr15 79596537 79596621 -23898353 - PB1 SINE Alu -29 98 14 1 1192 323 236 111 0 chr15 79597677 79597749 -23897225 + ID4_ SINE ID 1 80 -3 1 1192 242 300 58 39 chr15 79599157 79599261 -23895713 - MIRc SINE MIR -135 133 28 1 1192 2554 184 43 2 chr15 79599335 79599821 -23895153 - RLTR18B LTR ERVK -6 506 1 1 1192 1629 172 54 12 chr15 79599821 79600157 -23894817 - RLTR18-int LTR ERVK 0 5361 5012 1 1192 312 248 58 29 chr15 79600421 79600525 -23894449 + PB1D9 SINE Alu 1 107 -13 1 1192 852 181 28 0 chr15 79600543 79600687 -23894287 - B1_Mur4 SINE Alu -1 149 2 1 1192 374 212 123 0 chr15 79600728 79600874 -23894100 + (CAGG)n Simple_repeat Simple_repeat 2 165 0 1 1192 915 236 33 164 chr15 79601682 79601766 -23893208 + B4A SINE B4 4 96 -196 1 1192 501 292 26 13 chr15 79601766 79601922 -23893052 + RSINE1 SINE B4 3 160 -5 1 1192 915 236 33 164 chr15 79601922 79602167 -23892807 + B4A SINE B4 97 290 -2 1 1192 2904 61 0 6 chr15 79602721 79603083 -23891891 + L1Md_F2 LINE L1 6223 6582 0 1 1192 339 305 41 41 chr15 79603106 79603229 -23891745 - ID_B1 SINE B4 -21 203 81 1 1192 1090 244 26 22 chr15 79603778 79604050 -23890924 + B4A SINE B4 18 290 -2 1 1192 247 302 33 44 chr15 79604298 79604388 -23890586 - MIR3 SINE MIR -4 204 116 1 1192 346 312 77 24 chr15 79606204 79606411 -23888563 + L2 LINE L2 1855 2072 -1347 1 1192 624 316 79 62 chr15 79606665 79606951 -23888023 + ORR1E LTR MaLR 2 298 -61 1 1192 790 186 50 0 chr15 79606951 79607091 -23887883 - B1_Mus2 SINE Alu 0 147 1 1 1192 624 316 79 62 chr15 79607091 79607145 -23887829 + ORR1E LTR MaLR 299 348 -11 1 1192 831 189 210 5 chr15 79607351 79607537 -23887437 + URR1B DNA MER1_type 2 225 0 1 1192 240 232 18 0 chr15 79608635 79608691 -23886283 - B1F1 SINE Alu -91 58 2 1 1192 846 201 117 21 chr15 79608806 79608994 -23885980 - B3 SINE B2 -10 206 1 1 1192 1578 174 93 6 chr15 79609125 79609502 -23885472 + MTC LTR MaLR 3 421 0 1 1192 579 241 0 0 chr15 79609578 79609686 -23885288 + PB1D10 SINE Alu 3 110 -7 1 1192 216 191 0 0 chr15 79609802 79609849 -23885125 + A-rich Low_complexity Low_complexity 1 47 0 1 1192 637 246 49 5 chr15 79609861 79610045 -23884929 + B3A SINE B2 7 198 0 1 1192 2413 130 89 23 chr15 79610210 79610604 -23884370 + MTC LTR MaLR 2 421 0 1 1192 241 259 15 0 chr15 79610604 79610735 -23884239 + (TG)n Simple_repeat Simple_repeat 2 134 0 1 1192 320 293 77 28 chr15 79611399 79611574 -23883400 + ORR1E LTR MaLR 8 186 -188 1 1192 282 116 0 0 chr15 79611764 79611807 -23883167 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 1 1192 320 243 0 51 chr15 79612040 79612118 -23882856 + MIR SINE MIR 189 262 0 1 1192 1866 163 123 3 chr15 79612401 79612751 -23882223 + ORR1B1 LTR MaLR 1 392 -2 1 1192 202 401 67 31 chr15 79612773 79612966 -23882008 - L2b LINE L2 -252 3123 2924 1 1192 396 192 26 103 chr15 79613035 79613151 -23881823 - MT2B LTR ERVL -325 276 170 1 1192 748 31 0 0 chr15 79613056 79613152 -23881822 - B1_Mus1 SINE Alu -48 100 5 1 1192 1376 22 0 22 chr15 79613215 79613399 -23881575 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1 1192 851 106 3 51 chr15 79613399 79613720 -23881254 + CT-rich Low_complexity Low_complexity 1 305 0 1 1192 905 101 0 0 chr15 79613737 79613866 -23881108 - B1_Mus1 SINE Alu 0 148 20 1 1192 2390 80 3 6 chr15 79613866 79614205 -23880769 - MTB LTR MaLR -62 338 1 1 1192 542 190 31 107 chr15 79614195 79614331 -23880643 + B1_Mm SINE Alu 1 126 -21 1 1192 1441 76 38 0 chr15 79614331 79614516 -23880458 + B2_Mm2 SINE B2 2 193 -2 2 1192 542 190 31 107 chr15 79614516 79614538 -23880436 + B1_Mm SINE Alu 127 147 0 1 1192 291 28 0 0 chr15 79614549 79614585 -23880389 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1192 238 102 0 68 chr15 79615273 79615347 -23879627 + C-rich Low_complexity Low_complexity 4 72 0 2 1192 311 350 128 39 chr15 79615537 79615974 -23879000 - L2b LINE L2 -1759 1660 1185 1 1192 242 362 92 0 chr15 79617702 79617843 -23877131 + MIRb SINE MIR 71 224 -44 2 1192 187 175 75 0 chr15 79618162 79618202 -23876772 + L3b LINE CR1 191 233 -249 2 1192 266 277 133 6 chr15 79618916 79619086 -23875888 + MIRb SINE MIR 3 193 -15 2 1192 200 268 18 0 chr15 79619117 79619173 -23875801 - MIR SINE MIR -77 131 75 2 1192 432 0 0 0 chr15 79619188 79619236 -23875738 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 1192 225 394 44 25 chr15 79621168 79621327 -23873647 + RLTR25B LTR ERVK 486 647 -381 2 1192 1140 255 79 32 chr15 79621627 79621967 -23873007 + MTEa LTR MaLR 8 363 -16 2 1192 188 333 45 27 chr15 79623432 79623543 -23871431 + MIR SINE MIR 33 145 -63 2 1192 289 301 88 14 chr15 79624113 79624261 -23870713 - MIR3 SINE MIR -20 188 30 2 1192 319 330 17 2 chr15 79624336 79624479 -23870495 + MIRc SINE MIR 1 147 -121 2 1192 223 286 62 38 chr15 79625722 79625802 -23869172 + L2a LINE L2 3281 3401 -25 2 1192 216 182 23 0 chr15 79625822 79625866 -23869108 + L2b LINE L2 3331 3375 0 2 1192 213 281 0 0 chr15 79626389 79626446 -23868528 - MIRc SINE MIR -151 117 61 2 1192 187 279 0 0 chr15 79627194 79627237 -23867737 - MIRc SINE MIR -142 126 84 2 1192 705 219 53 7 chr15 79627839 79627991 -23866983 + ID_B1 SINE B4 66 224 0 2 1192 236 319 35 28 chr15 79628184 79628324 -23866650 + L2c LINE L2 3000 3135 -240 2 1192 193 350 51 10 chr15 79628469 79628598 -23866376 + MIRc SINE MIR 62 194 -74 2 1192 238 270 16 0 chr15 79628812 79628875 -23866099 + MIRc SINE MIR 61 124 -144 2 1192 391 272 42 24 chr15 79629171 79629337 -23865637 + L1M5 LINE L1 5540 5708 -465 2 1192 1222 61 0 13 chr15 79630014 79630164 -23864810 + B1_Mus1 SINE Alu 1 148 0 2 1192 222 118 0 0 chr15 79630164 79630198 -23864776 + (A)n Simple_repeat Simple_repeat 1 34 0 2 1192 544 308 113 0 chr15 79630358 79630553 -23864421 - ID_B1 SINE B4 -1 223 7 2 1192 284 332 103 70 chr15 79630923 79631137 -23863837 + MIRb SINE MIR 34 254 -14 2 1192 294 29 0 0 chr15 79631673 79631708 -23863266 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1192 1175 44 0 0 chr15 79631708 79631844 -23863130 - B1_Mus2 SINE Alu -10 137 2 2 1192 216 0 0 0 chr15 79631850 79631874 -23863100 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 2 1192 248 176 0 4 chr15 79633124 79633176 -23861798 - MIRc SINE MIR -96 172 119 2 1192 876 20 0 0 chr15 79633278 79633380 -23861594 + (TC)n Simple_repeat Simple_repeat 2 103 0 2 1192 238 266 25 12 chr15 79635045 79635125 -23859849 + G-rich Low_complexity Low_complexity 5 85 0 2 1192 25 65 0 0 chr15 79635184 79635230 -23859744 + GC_rich Low_complexity Low_complexity 1 46 0 2 1192 214 215 48 97 chr15 79635569 79635672 -23859302 - MIRb SINE MIR -125 143 46 2 1192 546 347 131 16 chr15 79636930 79637235 -23857739 + LTR40a LTR ERVL 80 419 -100 2 1192 242 232 36 0 chr15 79637235 79637291 -23857683 + C-rich Low_complexity Low_complexity 1 58 0 2 1192 585 175 12 84 chr15 79637350 79637505 -23857469 - B1_Mur1 SINE Alu 0 149 7 2 1192 291 262 0 91 chr15 79637427 79637515 -23857459 - MT2B2 LTR ERVL -344 240 161 2 1192 461 238 151 0 chr15 79637643 79637794 -23857180 + ID_B1 SINE B4 2 170 -54 2 1192 414 253 57 13 chr15 79637716 79637853 -23857121 + PB1D10 SINE Alu 12 148 -1 2 1192 276 159 18 27 chr15 79637864 79637974 -23857000 + (CAGAGA)n Simple_repeat Simple_repeat 6 114 0 2 1192 667 236 0 53 chr15 79638501 79638653 -23856321 + B1_Mur1 SINE Alu 2 145 -4 2 1192 688 238 68 7 chr15 79638968 79639116 -23855858 + RSINE1 SINE B4 3 159 -6 2 1192 355 323 0 10 chr15 79639220 79639320 -23855654 + MER81 DNA AcHobo 1 99 -15 2 1192 409 267 6 6 chr15 79639830 79640007 -23854967 + (TCTA)n Simple_repeat Simple_repeat 1 177 0 2 1192 437 261 150 34 chr15 79640033 79640180 -23854794 - RSINE1 SINE B4 0 165 2 2 1192 507 282 32 0 chr15 79641194 79641318 -23853656 - RSINE1 SINE B4 -29 136 9 2 1192 331 376 7 32 chr15 79641980 79642134 -23852840 - MIR SINE MIR -70 192 43 2 1192 1211 71 0 6 chr15 79642237 79642392 -23852582 + B2_Mm2 SINE B2 3 157 -38 2 1192 258 32 0 0 chr15 79642392 79642423 -23852551 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1192 1211 71 0 6 chr15 79642423 79642437 -23852537 + B2_Mm2 SINE B2 158 171 -24 2 1192 790 175 43 14 chr15 79642449 79642588 -23852386 + B1_Mur4 SINE Alu 1 143 -7 2 1192 318 148 0 0 chr15 79642592 79642646 -23852328 + (GGA)n Simple_repeat Simple_repeat 2 55 0 2 1192 954 181 0 0 chr15 79642667 79642816 -23852158 + B1_Mur1 SINE Alu 1 149 0 2 1192 787 123 39 0 chr15 79643005 79643159 -23851815 + GA-rich Low_complexity Low_complexity 3 162 0 2 1192 1620 0 0 0 chr15 79643159 79643339 -23851635 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 2 1192 759 120 4 5 chr15 79643437 79643584 -23851390 + B1_Mus2 SINE Alu 5 150 0 2 1192 864 238 47 28 chr15 79643589 79643801 -23851173 - B3 SINE B2 0 216 1 2 1192 285 357 49 14 chr15 79644416 79644558 -23850416 + MIR SINE MIR 4 150 -112 2 1192 610 227 0 15 chr15 79644793 79644923 -23850051 - RSINE1 SINE B4 -29 136 9 2 1192 825 246 36 40 chr15 79644922 79645146 -23849828 - B4A SINE B4 -61 231 9 2 1192 888 236 7 7 chr15 79646706 79646903 -23848071 - B3A SINE B2 -13 203 6 2 1192 920 254 26 13 chr15 79646895 79647122 -23847852 - B4A SINE B4 -58 234 5 2 1192 516 248 42 35 chr15 79647156 79647298 -23847676 - ID_B1 SINE B4 0 224 82 2 1192 600 354 50 16 chr15 79647396 79647775 -23847199 - L1MB1 LINE L1 -233 5935 5544 2 1192 306 0 0 0 chr15 79647887 79647921 -23847053 + (TC)n Simple_repeat Simple_repeat 1 34 0 2 1192 720 203 142 6 chr15 79647922 79648105 -23846869 - ID_B1 SINE B4 -1 223 16 2 1192 289 252 92 8 chr15 79648106 79648226 -23846748 - L1MB1 LINE L1 -742 5441 5312 2 1192 313 225 42 14 chr15 79648231 79648303 -23846671 - PB1D10 SINE Alu 0 117 44 2 1192 207 0 0 0 chr15 79648389 79648412 -23846562 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1192 408 67 0 0 chr15 79648500 79648560 -23846414 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 2 1192 956 66 48 62 chr15 79648560 79648706 -23846268 - B1_Mm SINE Alu -3 144 1 2 1192 189 0 0 0 chr15 79648706 79648727 -23846247 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1192 932 84 130 0 chr15 79648727 79648858 -23846116 - B1_Mus1 SINE Alu 0 148 1 2 1192 730 201 27 7 chr15 79648869 79649019 -23845955 - B3 SINE B2 -4 212 60 2 1192 454 205 71 9 chr15 79649020 79649133 -23845841 + RSINE1 SINE B4 27 146 -19 2 1192 230 266 24 135 chr15 79649374 79649500 -23845474 + PB1D7 SINE Alu 1 112 -8 2 1192 256 259 12 47 chr15 79649502 79649587 -23845387 + ID4 SINE ID 2 83 0 2 1192 365 373 26 30 chr15 79649638 79649906 -23845068 - L1MEd LINE L1 -5404 715 449 2 1192 1637 42 0 0 chr15 79650153 79650346 -23844628 - B2_Mm1a SINE B2 0 193 1 2 1192 269 110 0 52 chr15 79650983 79651060 -23843914 + T-rich Low_complexity Low_complexity 4 76 0 2 1192 980 91 48 20 chr15 79651060 79651206 -23843768 - B1_Mur4 SINE Alu 0 150 1 2 1192 987 270 4 13 chr15 79651206 79651435 -23843539 - B4A SINE B4 -62 230 4 2 1192 453 160 85 0 chr15 79652376 79652470 -23842504 + B1_Mus2 SINE Alu 11 112 -35 2 1192 508 271 0 16 chr15 79652465 79652589 -23842385 + ID_B1 SINE B4 84 205 -19 2 1192 713 263 26 24 chr15 79653791 79654000 -23840974 - B3A SINE B2 -5 190 2 2 1192 423 347 20 33 chr15 79654014 79654166 -23840808 - RSINE1 SINE B4 0 165 16 2 1192 186 43 0 0 chr15 79654248 79654271 -23840703 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1192 202 150 25 0 chr15 79654700 79654740 -23840234 + (TA)n Simple_repeat Simple_repeat 1 41 0 2 1192 22 0 0 0 chr15 79654773 79654795 -23840179 + AT_rich Low_complexity Low_complexity 1 22 0 2 1192 404 105 0 62 chr15 79656489 79656570 -23838404 + T-rich Low_complexity Low_complexity 1 76 0 2 1192 552 247 168 26 chr15 79659565 79659756 -23835218 + ID_B1 SINE B4 5 222 -2 2 1192 283 176 374 0 chr15 79661179 79661270 -23833704 - B3 SINE B2 -91 125 1 2 1192 1429 84 11 0 chr15 79661545 79661735 -23833239 + B2_Mm1t SINE B2 1 192 -1 2 1192 817 186 51 0 chr15 79661788 79661944 -23833030 + B3 SINE B2 2 165 -51 2 1192 330 26 0 0 chr15 79661946 79661985 -23832989 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1192 207 0 0 0 chr15 79662001 79662024 -23832950 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1192 180 300 9 99 chr15 79662435 79662546 -23832428 + MIRc SINE MIR 107 207 -61 2 1192 266 0 0 29 chr15 79663194 79663229 -23831745 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1192 215 145 71 114 chr15 79664124 79664194 -23830780 - B1_Mus1 SINE Alu -49 99 33 2 1192 29 28 0 0 chr15 79664725 79664761 -23830213 + GC_rich Low_complexity Low_complexity 1 36 0 2 1192 22 0 0 0 chr15 79665290 79665312 -23829662 + GC_rich Low_complexity Low_complexity 1 22 0 2 1192 270 369 157 29 chr15 79666522 79666754 -23828220 - MLT1D LTR MaLR 0 505 246 2 1192 1197 42 7 0 chr15 79666754 79666896 -23828078 - B1_Mm SINE Alu 0 147 5 3 1192 270 369 157 29 chr15 79666896 79667045 -23827929 - MLT1D LTR MaLR -260 245 76 2 1192 892 266 109 15 chr15 79667114 79667249 -23827725 - B4A SINE B4 0 292 153 3 1192 360 0 0 0 chr15 79667249 79667289 -23827685 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1192 892 266 109 15 chr15 79667289 79667420 -23827554 - B4A SINE B4 -140 152 2 3 1192 502 93 660 0 chr15 79667724 79667858 -23827116 - URR1B DNA MER1_type -2 223 1 3 1192 891 302 179 11 chr15 79668148 79668516 -23826458 + MLT1E1 LTR MaLR 44 473 -181 3 1192 6544 100 22 21 chr15 79668632 79669585 -23825389 + RMER17B LTR ERVK 1 954 -4 3 1192 1483 208 122 15 chr15 79669646 79669983 -23824991 + ORR1D1 LTR MaLR 1 373 -1 3 1192 1216 55 0 7 chr15 79670014 79670160 -23824814 + B1_Mus1 SINE Alu 4 148 0 3 1192 259 194 62 41 chr15 79670196 79670341 -23824633 + (TATAA)n Simple_repeat Simple_repeat 5 152 0 3 1192 891 163 7 20 chr15 79670417 79670567 -23824407 + B1_Mus1 SINE Alu 1 148 0 3 1192 606 261 6 128 chr15 79670892 79671072 -23823902 + RSINE1 SINE B4 2 159 -6 3 1192 1002 131 7 0 chr15 79671116 79671261 -23823713 + B1_Mus1 SINE Alu 2 147 -1 3 1192 195 184 0 0 chr15 79671272 79671310 -23823664 + GA-rich Low_complexity Low_complexity 3 40 0 3 1192 1017 150 0 0 chr15 79671312 79671492 -23823482 + (GGA)n Simple_repeat Simple_repeat 1 180 0 3 1192 1368 67 0 0 chr15 79671492 79671672 -23823302 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 3 1192 245 197 16 0 chr15 79671672 79671733 -23823241 + GA-rich Low_complexity Low_complexity 2 63 0 3 1192 1440 72 0 25 chr15 79672315 79672513 -23822461 - B2_Mm2 SINE B2 -1 194 2 3 1192 1294 190 0 14 chr15 79672535 79672749 -23822225 - B3 SINE B2 -5 211 1 3 1192 1166 215 191 5 chr15 79672851 79673253 -23821721 - Lx9 LINE L1 0 7644 7168 3 1192 22 0 0 0 chr15 79673279 79673301 -23821673 + AT_rich Low_complexity Low_complexity 1 22 0 3 1192 1280 97 0 28 chr15 79673304 79673459 -23821515 + B2_Mm2 SINE B2 2 156 -39 3 1192 188 0 74 0 chr15 79673459 79673486 -23821488 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 3 1192 1280 97 0 28 chr15 79673486 79673511 -23821463 + B2_Mm2 SINE B2 157 177 -18 3 1192 922 220 79 41 chr15 79673511 79673828 -23821146 + RLTR15 LTR ERVK 14 342 -17 3 1192 340 279 0 55 chr15 79673891 79673908 -23821066 - RSINE1 SINE B4 -2 163 147 3 1192 360 43 0 0 chr15 79673908 79673954 -23821020 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1192 355 293 37 131 chr15 79673954 79674282 -23820692 - B4 SINE B4 -11 281 1 3 1192 420 277 30 0 chr15 79674288 79674389 -23820585 - PB1 SINE Alu -3 124 21 3 1192 211 326 149 62 chr15 79674389 79674664 -23820310 + L2a LINE L2 3128 3426 0 3 1192 275 156 90 45 chr15 79674786 79674853 -23820121 + MIRc SINE MIR 81 150 -118 3 1192 516 130 0 0 chr15 79674981 79675073 -23819901 + (CA)n Simple_repeat Simple_repeat 1 92 0 3 1192 450 270 35 35 chr15 79675172 79675313 -23819661 + ORR1E LTR MaLR 21 161 -198 3 1192 926 229 0 101 chr15 79675313 79675522 -23819452 + B3 SINE B2 1 188 -28 3 1192 363 23 0 0 chr15 79675538 79675582 -23819392 + (CATA)n Simple_repeat Simple_repeat 3 46 0 3 1192 275 291 152 24 chr15 79675607 79675740 -23819234 + ORR1E LTR MaLR 219 378 -1 3 1192 230 319 127 9 chr15 79676531 79676666 -23818308 + L2c LINE L2 3129 3311 -76 3 1192 2669 76 31 92 chr15 79676874 79677024 -23817950 - BGLII LTR ERVK 0 421 284 3 1192 1196 55 7 0 chr15 79677024 79677169 -23817805 + B1_Mus1 SINE Alu 3 148 0 3 1192 2669 76 31 92 chr15 79677169 79677466 -23817508 - BGLII LTR ERVK -138 283 1 3 1192 191 257 290 16 chr15 79677601 79677787 -23817187 - L2 LINE L2 -338 3081 2845 3 1192 294 292 0 0 chr15 79678012 79678084 -23816890 + (TG)n Simple_repeat Simple_repeat 2 73 0 3 1192 6255 101 55 15 chr15 79678745 79679666 -23815308 - RMER17B LTR ERVK 0 958 1 3 1192 1309 101 36 32 chr15 79680152 79680399 -23814575 - ORR1B1 LTR MaLR -19 375 108 3 1192 248 186 17 0 chr15 79680475 79680534 -23814440 + GA-rich Low_complexity Low_complexity 4 63 0 3 1192 446 221 0 0 chr15 79680550 79680627 -23814347 + ID_B1 SINE B4 87 163 -61 3 1192 408 235 7 44 chr15 79680627 79680658 -23814316 + PB1D10 SINE Alu 6 112 -37 3 1192 767 219 68 82 chr15 79680658 79680877 -23814097 + B3A SINE B2 1 216 0 3 1192 1653 210 32 19 chr15 79680980 79680995 -23813979 - ORR1D1 LTR MaLR 0 374 362 3 1192 1184 68 7 0 chr15 79680995 79681141 -23813833 - B1_Mus2 SINE Alu 0 147 1 3 1192 1653 210 32 19 chr15 79681141 79681494 -23813480 - ORR1D1 LTR MaLR -13 361 1 3 1192 273 246 0 0 chr15 79681694 79681751 -23813223 + ID4_ SINE ID 15 71 -12 3 1192 2230 124 80 24 chr15 79681774 79682021 -23812953 - ORR1B1 LTR MaLR 0 394 149 3 1192 1723 11 5 0 chr15 79682021 79682212 -23812762 + B2_Mm1a SINE B2 2 193 0 3 1192 2230 124 80 24 chr15 79682212 79682337 -23812637 - ORR1B1 LTR MaLR -246 148 1 3 1192 29 0 0 0 chr15 79682758 79682787 -23812187 + AT_rich Low_complexity Low_complexity 1 29 0 3 1192 35 0 0 0 chr15 79682825 79682860 -23812114 + AT_rich Low_complexity Low_complexity 1 35 0 3 1192 1320 14 0 0 chr15 79682860 79683007 -23811967 - B1_Mm SINE Alu 0 147 1 3 1192 570 268 42 89 chr15 79683305 79683440 -23811534 + ID_B1 SINE B4 1 142 -82 3 1192 945 101 86 7 chr15 79683440 79683579 -23811395 + B1_Mur4 SINE Alu 1 150 0 3 1192 570 268 42 89 chr15 79683579 79683656 -23811318 + ID_B1 SINE B4 143 203 -21 3 1192 966 241 39 0 chr15 79683700 79683903 -23811071 + B3 SINE B2 1 211 -5 3 1192 354 98 0 0 chr15 79683964 79684015 -23810959 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1192 275 154 15 0 chr15 79684014 79684079 -23810895 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 1192 683 260 101 51 chr15 79684109 79684385 -23810589 - B4A SINE B4 -2 290 1 3 1192 785 251 64 20 chr15 79684458 79684661 -23810313 + B3 SINE B2 5 216 0 3 1192 708 171 77 8 chr15 79685080 79685210 -23809764 + B1_Mur2 SINE Alu 2 140 -9 3 1192 293 188 29 0 chr15 79685212 79685281 -23809693 + (TATG)n Simple_repeat Simple_repeat 2 72 0 3 1192 355 299 0 30 chr15 79685284 79685384 -23809590 - RMER12 LTR ERVK -466 856 760 3 1192 217 317 0 0 chr15 79685483 79685543 -23809431 - MIR SINE MIR -28 234 175 3 1192 212 291 0 0 chr15 79685581 79685636 -23809338 + (TCCA)n Simple_repeat Simple_repeat 1 55 0 3 1192 506 273 38 105 chr15 79686104 79686130 -23808844 - B2_Mm2 SINE B2 0 195 174 3 1192 276 30 0 0 chr15 79686130 79686163 -23808811 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1192 780 229 16 29 chr15 79686163 79686345 -23808629 - B3 SINE B2 -22 173 1 3 1192 640 150 20 48 chr15 79686345 79686474 -23808500 - B1_Mur3 SINE Alu -12 137 12 3 1192 765 280 23 102 chr15 79686462 79686728 -23808246 + MT2B LTR ERVL 284 528 -73 3 1192 306 129 0 0 chr15 79686728 79686790 -23808184 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 1192 492 18 0 0 chr15 79686794 79686851 -23808123 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1192 11039 156 30 12 chr15 79686852 79688792 -23806182 + MERVL_2A-int LTR ERVL 3705 5679 -82 3 1192 1449 75 11 5 chr15 79688824 79689013 -23805961 + B2_Mm2 SINE B2 1 190 -5 3 1192 256 149 84 56 chr15 79689019 79689090 -23805884 + ORR1A3-int LTR MaLR 567 639 -1324 3 1192 1675 36 0 0 chr15 79689100 79689293 -23805681 + B2_Mm1a SINE B2 1 193 0 3 1192 298 146 36 0 chr15 79689293 79689348 -23805626 + MERVL_2A-int LTR ERVL 5705 5761 0 3 1192 846 289 93 93 chr15 79689348 79689481 -23805493 + MT2A LTR ERVL 1 142 -391 3 1192 687 175 79 14 chr15 79689481 79689620 -23805354 - B1_Mus1 SINE Alu 0 148 1 3 1192 846 289 93 93 chr15 79689620 79689948 -23805026 + MT2A LTR ERVL 143 461 -72 3 1192 240 35 0 0 chr15 79689961 79689990 -23804984 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 1192 559 168 30 0 chr15 79689992 79690159 -23804815 + (TA)n Simple_repeat Simple_repeat 1 172 0 3 1192 333 120 0 0 chr15 79690162 79690212 -23804762 + MT2A LTR ERVL 535 584 0 3 1192 239 187 22 157 chr15 79690535 79690624 -23804350 + B1F SINE Alu 40 116 -33 3 1192 762 165 22 8 chr15 79690942 79691076 -23803898 + B1_Mur4 SINE Alu 15 150 0 3 1192 850 236 19 14 chr15 79691103 79691318 -23803656 - B4 SINE B4 -75 217 2 3 1192 251 155 29 147 chr15 79691693 79691761 -23803213 + B3A SINE B2 1 60 -156 3 1193 2118 143 26 4 chr15 79691868 79692347 -23802627 + RLTR33 LTR ERVK 4 538 -140 3 1193 1347 96 16 5 chr15 79692343 79692531 -23802443 - B2_Mm2 SINE B2 0 195 6 3 1193 484 193 171 12 chr15 79692550 79692682 -23802292 + RLTR33 LTR ERVK 402 613 -65 3 1193 510 295 9 14 chr15 79692682 79692808 -23802166 + B3A SINE B2 47 163 -53 3 1193 462 36 0 0 chr15 79692808 79692864 -23802110 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 1193 461 324 6 62 chr15 79692864 79692898 -23802076 + B3 SINE B2 164 197 -19 3 1193 797 153 7 99 chr15 79693035 79693187 -23801787 + B1_Mur3 SINE Alu 5 142 -7 3 1193 968 237 14 10 chr15 79693384 79693593 -23801381 - B3 SINE B2 0 216 7 3 1193 577 155 28 16 chr15 79693629 79693882 -23801092 + (TG)n Simple_repeat Simple_repeat 1 256 0 3 1193 780 155 23 8 chr15 79693920 79694184 -23800790 + (TG)n Simple_repeat Simple_repeat 1 268 0 3 1193 677 230 76 38 chr15 79694379 79694564 -23800410 - ID_B1 SINE B4 -21 203 12 3 1193 340 182 219 14 chr15 79694558 79694655 -23800319 - PB1 SINE Alu -11 116 1 3 1193 244 215 23 92 chr15 79694760 79694847 -23800127 - L1M4 LINE L1 -1356 4790 4710 3 1193 894 272 33 5 chr15 79694850 79695064 -23799910 - ID_B1 SINE B4 -3 221 2 3 1193 514 311 43 17 chr15 79695071 79695382 -23799592 - L1M4 LINE L1 -1460 4680 4365 3 1193 664 43 22 0 chr15 79695382 79695474 -23799500 + (TTTTC)n Simple_repeat Simple_repeat 5 98 0 3 1193 709 160 50 0 chr15 79695483 79695602 -23799372 - B1_Mus1 SINE Alu -1 147 23 3 1193 266 294 25 76 chr15 79695516 79695625 -23799349 - MT2B LTR ERVL -336 265 163 3 1193 481 84 12 0 chr15 79695625 79695708 -23799266 - L1Md_F2 LINE L1 0 6582 6499 3 1193 343 336 113 30 chr15 79695718 79695745 -23799229 - L1M4 LINE L1 -2461 3685 3658 3 1193 600 53 0 0 chr15 79695745 79695821 -23799153 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 1193 343 336 113 30 chr15 79695821 79696023 -23798951 - L1M4 LINE L1 -2489 3657 3437 3 1193 226 98 19 19 chr15 79696049 79696101 -23798873 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1193 1484 46 17 0 chr15 79696128 79696303 -23798671 - B2_Mm2 SINE B2 -16 179 2 3 1193 229 0 54 27 chr15 79696307 79696344 -23798630 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 3 1193 239 296 42 14 chr15 79696349 79696421 -23798553 - ID4_ SINE ID -9 74 1 3 1193 261 146 0 0 chr15 79696432 79696480 -23798494 + (TTC)n Simple_repeat Simple_repeat 2 49 0 4 1193 1045 47 0 0 chr15 79696496 79696623 -23798351 - B1_Mus1 SINE Alu 0 148 22 4 1193 397 216 21 126 chr15 79696531 79696674 -23798300 - MT2B LTR ERVL -337 264 137 4 1193 373 314 53 42 chr15 79696769 79697032 -23797942 - L1M4 LINE L1 -2842 3304 3039 3 1193 243 0 0 0 chr15 79697032 79697059 -23797915 + (TGG)n Simple_repeat Simple_repeat 1 27 0 4 1193 763 173 38 0 chr15 79697060 79697193 -23797781 - B1_Mur3 SINE Alu -7 142 5 4 1193 1550 48 21 0 chr15 79697213 79697401 -23797573 - B2_Mm1a SINE B2 0 193 2 4 1193 1033 216 49 0 chr15 79697433 79697637 -23797337 + B3 SINE B2 3 216 0 4 1193 1437 224 98 18 chr15 79697655 79697992 -23796982 - ORR1D2 LTR MaLR -6 364 1 4 1193 1415 80 11 5 chr15 79698130 79698318 -23796656 + B2_Mm2 SINE B2 2 190 -5 4 1193 988 93 0 0 chr15 79698450 79698579 -23796395 + B2_Mm2 SINE B2 1 129 -66 4 1193 3569 99 48 9 chr15 79698583 79699123 -23795851 - RMER2 LTR ERV1 0 567 7 4 1193 213 132 158 0 chr15 79699180 79699218 -23795756 - B3A SINE B2 -154 44 1 4 1193 413 158 129 5 chr15 79699218 79699322 -23795652 - PB1D10 SINE Alu -6 111 11 4 1193 1541 84 29 61 chr15 79699349 79699627 -23795347 - BGLII LTR ERVK -152 269 1 4 1193 471 180 0 82 chr15 79699627 79699701 -23795273 - PB1D9 SINE Alu -54 66 1 4 1193 837 264 9 9 chr15 79699737 79699947 -23795027 + B3 SINE B2 1 210 -6 4 1193 636 262 51 23 chr15 79699978 79700154 -23794820 + B3A SINE B2 2 182 -16 4 1193 2906 39 2 119 chr15 79700213 79700650 -23794324 - RLTR10 LTR ERVK -4 386 1 4 1193 8529 17 0 3 chr15 79700652 79701650 -23793324 - RLTR10-int LTR ERVK -3 1984 990 4 1193 323 248 62 39 chr15 79701732 79701862 -23793112 - RLTR10-int LTR ERVK -5987 1594 1462 4 1193 7826 35 4 2 chr15 79701926 79702882 -23792092 - RLTR10-int LTR ERVK -989 998 41 4 1193 2906 39 2 119 chr15 79702898 79703335 -23791639 - RLTR10 LTR ERVK -4 386 1 4 1193 1209 276 46 19 chr15 79703477 79703846 -23791128 + MTEb LTR MaLR 1 379 0 4 1193 337 155 0 0 chr15 79704430 79704488 -23790486 - B2_Mm2 SINE B2 -137 58 1 4 1193 2574 120 82 7 chr15 79704488 79704915 -23790059 - RMER6B LTR ERVK -2 459 1 4 1193 438 273 23 0 chr15 79705241 79705329 -23789645 + B3 SINE B2 43 132 -84 4 1193 247 287 9 122 chr15 79705363 79705378 -23789596 + MT2B LTR ERVL 155 156 -445 4 1193 354 306 36 9 chr15 79705378 79705490 -23789484 + B1F2 SINE Alu 1 115 -34 4 1193 276 100 0 0 chr15 79705498 79705538 -23789436 + (GAAA)n Simple_repeat Simple_repeat 3 42 0 4 1193 7866 62 23 7 chr15 79706383 79707390 -23787584 - RLTR13D5 LTR ERVK 0 1023 1 4 1193 1282 116 17 0 chr15 79707586 79707767 -23787207 - B2_Mm2 SINE B2 -11 184 1 4 1193 415 191 0 141 chr15 79707779 79707907 -23787067 + MT2B LTR ERVL 155 264 -337 4 1193 848 203 0 0 chr15 79707794 79707942 -23787032 + B1_Mus1 SINE Alu 1 148 0 4 1193 534 226 0 19 chr15 79707963 79708067 -23786907 + ID_B1 SINE B4 118 219 -5 4 1193 344 197 14 27 chr15 79708141 79708214 -23786760 + B1_Mur1 SINE Alu 77 148 -1 4 1193 215 319 0 0 chr15 79708299 79708368 -23786606 + A-rich Low_complexity Low_complexity 1 69 0 4 1193 301 253 28 142 chr15 79708378 79708484 -23786490 - B3A SINE B2 -14 184 91 4 1193 1116 195 56 0 chr15 79708484 79708804 -23786170 + RLTR24 LTR ERV1 1 411 -118 4 1193 201 121 0 0 chr15 79708849 79708882 -23786092 + (T)n Simple_repeat Simple_repeat 1 33 0 4 1193 838 166 27 7 chr15 79708917 79709063 -23785911 - B1_Mur4 SINE Alu 0 150 2 4 1193 473 244 10 15 chr15 79709087 79709199 -23785775 - B3A SINE B2 -101 115 1 4 1193 446 370 144 32 chr15 79709720 79710310 -23784664 - Charlie25 DNA MER1_type -1062 1462 807 4 1193 704 219 0 14 chr15 79710312 79710451 -23784523 - ID_B1 SINE B4 -8 216 80 4 1193 220 37 73 18 chr15 79710451 79710506 -23784468 + (TTTTG)n Simple_repeat Simple_repeat 2 59 0 4 1193 309 306 0 0 chr15 79711145 79711217 -23783757 - ID SINE ID -148 76 5 4 1193 789 129 114 0 chr15 79711258 79711390 -23783584 + B1_Mur3 SINE Alu 3 149 0 4 1193 279 133 0 0 chr15 79711452 79711497 -23783477 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1193 692 269 100 26 chr15 79711521 79711792 -23783182 - B4 SINE B4 0 292 2 4 1193 333 341 98 26 chr15 79711805 79712070 -23782904 - Charlie25 DNA MER1_type -1807 717 434 4 1193 210 182 23 0 chr15 79712204 79712248 -23782726 - RSINE1 SINE B4 -118 47 3 4 1193 397 246 200 0 chr15 79712749 79712859 -23782115 - B1_Mur1 SINE Alu -6 143 12 4 1193 481 303 57 25 chr15 79713136 79713316 -23781658 + MLT1I LTR MaLR 2 177 -234 4 1193 462 49 0 0 chr15 79714318 79714379 -23780595 + (TAA)n Simple_repeat Simple_repeat 1 61 0 4 1193 320 233 69 6 chr15 79714380 79714540 -23780434 + (TAGA)n Simple_repeat Simple_repeat 1 170 0 4 1193 414 0 0 0 chr15 79714653 79714699 -23780275 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1193 1393 73 10 30 chr15 79714778 79714977 -23779997 - B2_Mm2 SINE B2 0 195 1 4 1193 373 188 86 0 chr15 79714998 79715096 -23779878 - PB1D9 SINE Alu 0 120 5 4 1193 376 237 0 50 chr15 79715178 79715258 -23779716 + ID SINE ID 5 80 -144 4 1193 531 294 0 0 chr15 79715764 79715883 -23779091 + ID_B1 SINE B4 95 213 -11 4 1193 315 0 0 0 chr15 79715888 79715923 -23779051 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 4 1193 388 320 23 47 chr15 79715938 79716066 -23778908 + RSINE1 SINE B4 40 164 -1 4 1193 1085 212 149 33 chr15 79716066 79716423 -23778551 + MT2B LTR ERVL 1 541 -60 4 1193 486 70 0 0 chr15 79716424 79716495 -23778479 + (GA)n Simple_repeat Simple_repeat 1 71 0 4 1193 310 140 0 39 chr15 79716496 79716548 -23778426 + MT2B LTR ERVL 535 584 0 4 1193 1098 71 7 0 chr15 79716588 79716728 -23778246 + B1_Mus1 SINE Alu 2 142 -6 4 1193 510 17 0 0 chr15 79716730 79716789 -23778185 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 4 1193 878 126 210 39 chr15 79716800 79716981 -23777993 + B3 SINE B2 1 212 -4 4 1193 198 103 0 0 chr15 79716992 79717021 -23777953 + (A)n Simple_repeat Simple_repeat 1 29 0 4 1193 953 169 0 0 chr15 79717429 79717577 -23777397 - B1_Mur4 SINE Alu 0 150 3 4 1193 25 0 0 0 chr15 79717580 79717605 -23777369 + AT_rich Low_complexity Low_complexity 1 25 0 4 1193 1501 68 5 0 chr15 79717612 79717804 -23777170 - B2_Mm1a SINE B2 0 193 1 4 1193 1339 70 12 0 chr15 79717804 79717975 -23776999 - B2_Mm1t SINE B2 -19 174 2 4 1193 903 45 0 0 chr15 79718003 79718113 -23776861 - B1_Mm SINE Alu 0 147 38 4 1193 550 261 167 5 chr15 79718142 79718336 -23776638 - B3A SINE B2 0 216 1 4 1193 515 221 76 8 chr15 79718463 79718595 -23776379 + B3A SINE B2 12 152 -46 4 1193 630 269 0 7 chr15 79718666 79718816 -23776158 + B1_Mur1 SINE Alu 1 149 0 4 1193 812 253 17 6 chr15 79718979 79719060 -23775914 + ID SINE ID 2 84 -140 4 1193 320 250 171 9 chr15 79719060 79719165 -23775809 + PB1 SINE Alu 4 125 -2 4 1193 351 326 14 0 chr15 79719191 79719329 -23775645 + L1M4 LINE L1 5637 5776 -398 4 1193 257 298 96 0 chr15 79719329 79719358 -23775616 - B1F1 SINE Alu -10 139 26 4 1193 339 253 13 0 chr15 79719358 79719433 -23775541 - ID_B1 SINE B4 -42 182 107 4 1193 907 138 80 0 chr15 79719532 79719670 -23775304 + B1_Mur4 SINE Alu 2 150 0 4 1193 391 260 56 117 chr15 79719702 79719898 -23775076 - RLTR23 LTR ERV1 0 430 247 4 1193 589 227 100 15 chr15 79720138 79720268 -23774706 + B1_Mus2 SINE Alu 7 147 0 4 1193 258 259 12 0 chr15 79720276 79720357 -23774617 + L1M4 LINE L1 5815 5896 -287 4 1193 1625 194 101 22 chr15 79720357 79720715 -23774259 + MTB LTR MaLR 2 387 -13 4 1193 268 315 18 27 chr15 79720951 79721062 -23773912 + PB1D10 SINE Alu 1 110 -7 4 1193 314 288 193 7 chr15 79721096 79721236 -23773738 + L1MC LINE L1 5442 5607 -737 4 1193 605 184 251 56 chr15 79721399 79721578 -23773396 + B3 SINE B2 3 216 0 4 1193 350 290 64 20 chr15 79721606 79721774 -23773200 - MIRb SINE MIR -18 250 70 4 1193 528 289 22 65 chr15 79723623 79723808 -23771166 + B3A SINE B2 8 184 -14 4 1193 1148 35 35 7 chr15 79723825 79723967 -23771007 + B1_Mus2 SINE Alu 2 147 0 4 1193 1541 43 43 0 chr15 79724641 79724826 -23770148 - B2_Mm1a SINE B2 0 193 1 4 1193 466 331 0 0 chr15 79724959 79725080 -23769894 - B1F1 SINE Alu -14 135 15 4 1193 572 322 64 5 chr15 79725255 79725458 -23769516 - B4A SINE B4 -20 272 58 4 1193 2147 61 0 20 chr15 79725992 79726293 -23768681 - RLTR4_Mm LTR ERV1 0 742 448 4 1193 1616 71 78 8 chr15 79726267 79726523 -23768451 - RLTR4_Mm LTR ERV1 -468 274 1 4 1193 998 252 9 9 chr15 79726529 79726745 -23768229 + ID_B1 SINE B4 3 218 -6 4 1193 626 333 54 11 chr15 79726779 79727055 -23767919 + B4A SINE B4 2 289 -3 4 1193 180 0 0 0 chr15 79727071 79727091 -23767883 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1193 687 221 14 7 chr15 79727160 79727301 -23767673 + B1_Mur1 SINE Alu 2 143 -6 4 1193 774 154 59 0 chr15 79727312 79727394 -23767580 + B1_Mus1 SINE Alu 3 89 -59 4 1193 453 19 0 0 chr15 79727394 79727448 -23767526 + (GA)n Simple_repeat Simple_repeat 2 55 0 4 1193 774 154 59 0 chr15 79727448 79727501 -23767473 + B1_Mus1 SINE Alu 90 144 -4 4 1193 1190 68 7 0 chr15 79727526 79727673 -23767301 + B1_Mus1 SINE Alu 1 148 0 4 1193 783 0 0 0 chr15 79727681 79727768 -23767206 + (GGAAA)n Simple_repeat Simple_repeat 2 88 0 4 1193 259 346 0 0 chr15 79727769 79727850 -23767124 - MER33 DNA MER1_type -224 100 20 4 1193 780 132 0 0 chr15 79728857 79728978 -23765996 + B3 SINE B2 1 121 -95 4 1193 413 305 48 34 chr15 79729654 79729800 -23765174 + RSINE1 SINE B4 5 152 -13 4 1193 498 33 0 0 chr15 79729807 79729867 -23765107 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 1193 330 138 0 0 chr15 79729876 79729934 -23765040 + (ATG)n Simple_repeat Simple_repeat 2 59 0 4 1193 995 76 7 7 chr15 79729950 79730085 -23764889 + B1_Mus2 SINE Alu 2 137 -10 5 1193 265 24 48 0 chr15 79730085 79730127 -23764847 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 5 1193 228 198 208 75 chr15 79730612 79730732 -23764242 + MIRb SINE MIR 1 136 -132 5 1193 186 71 0 0 chr15 79730843 79730871 -23764103 + (CCCCCT)n Simple_repeat Simple_repeat 5 32 0 5 1193 283 238 36 45 chr15 79731222 79731332 -23763642 + MT2B LTR ERVL 148 256 -345 5 1193 660 192 46 8 chr15 79731248 79731379 -23763595 + B1_Mur3 SINE Alu 14 149 0 5 1193 212 81 0 26 chr15 79731492 79731507 -23763467 + (GAAAA)n Simple_repeat Simple_repeat 4 17 0 5 1193 559 75 0 0 chr15 79731507 79731609 -23763365 + L1_Mus1 LINE L1 6488 6567 0 5 1193 584 172 7 0 chr15 79731848 79731993 -23762981 + (CA)n Simple_repeat Simple_repeat 1 146 0 5 1193 295 125 0 0 chr15 79732095 79732143 -23762831 - B1_Mus1 SINE Alu -93 55 8 5 1193 471 195 23 11 chr15 79732180 79732268 -23762706 + B1_Mur1 SINE Alu 54 142 -7 5 1193 405 0 0 0 chr15 79733051 79733096 -23761878 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1193 563 287 30 30 chr15 79733574 79733743 -23761231 - B3 SINE B2 0 216 48 5 1193 180 0 0 0 chr15 79733743 79733763 -23761211 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1193 1191 50 0 0 chr15 79733766 79733906 -23761068 - B1_Mus2 SINE Alu -5 142 3 5 1193 305 152 0 0 chr15 79733907 79733953 -23761021 - B3A SINE B2 -134 64 19 5 1193 405 321 10 18 chr15 79734050 79734207 -23760767 + B4 SINE B4 1 151 -141 5 1193 2822 92 25 8 chr15 79735109 79735505 -23759469 - RLTR9D LTR ERVK 0 403 1 5 1193 252 234 0 0 chr15 79735617 79735664 -23759310 - MER83A-int LTR ERV1 -4108 177 131 5 1193 321 154 266 13 chr15 79736399 79736478 -23758496 + B1_Mus1 SINE Alu 11 109 -39 5 1193 587 232 27 27 chr15 79737909 79738055 -23756919 - B1_Mus2 SINE Alu 0 147 2 5 1193 614 144 154 39 chr15 79738165 79738295 -23756679 + B1_Mus2 SINE Alu 2 146 -1 5 1193 305 113 191 16 chr15 79738381 79738444 -23756530 + PB1D7 SINE Alu 47 120 0 5 1193 496 283 53 26 chr15 79738554 79738769 -23756205 + B3A SINE B2 1 211 -5 5 1193 202 116 47 0 chr15 79738771 79738814 -23756160 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 1193 198 0 0 0 chr15 79738932 79738954 -23756020 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 1193 1153 42 0 41 chr15 79739062 79739209 -23755765 + B1_Mus1 SINE Alu 3 143 -5 5 1193 234 0 0 0 chr15 79739210 79739236 -23755738 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 5 1193 286 289 12 24 chr15 79739264 79739349 -23755625 - MTE-int LTR MaLR -52 1528 1445 5 1193 869 264 29 0 chr15 79739358 79739566 -23755408 - B3 SINE B2 -1 215 2 5 1193 297 200 108 32 chr15 79739655 79739748 -23755226 - MTE-int LTR MaLR -128 1452 1353 5 1193 1200 62 0 7 chr15 79739750 79739897 -23755077 + B1_Mm SINE Alu 1 146 -1 5 1193 495 211 99 40 chr15 79739910 79739992 -23754982 - MTE-int LTR MaLR -143 1437 1340 5 1193 1161 82 0 7 chr15 79739992 79740140 -23754834 + B1_Mm SINE Alu 1 147 0 5 1193 1225 290 124 24 chr15 79740140 79740660 -23754314 - MTE-int LTR MaLR -218 1362 832 5 1193 1216 54 0 13 chr15 79740864 79741013 -23753961 + B1_Mus1 SINE Alu 2 148 0 5 1193 787 111 3 11 chr15 79741159 79741299 -23753675 - B1_Mus1 SINE Alu -13 136 2 5 1193 271 236 0 24 chr15 79741192 79741318 -23753656 - MTE-int LTR MaLR -755 754 632 5 1193 978 92 19 1 chr15 79741333 79741499 -23753475 + B2_Mm2 SINE B2 1 179 -14 5 1193 716 261 106 5 chr15 79741516 79741705 -23753269 - ID_B1 SINE B4 0 224 17 5 1193 691 184 200 6 chr15 79742095 79742270 -23752704 - MTD LTR MaLR -15 404 196 5 1193 1276 67 0 11 chr15 79742272 79742454 -23752520 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 1193 453 81 0 0 chr15 79742454 79742516 -23752458 + (TC)n Simple_repeat Simple_repeat 1 62 0 5 1193 1274 87 47 26 chr15 79742516 79742706 -23752268 - B2_Mm2 SINE B2 0 195 2 5 1193 930 199 18 72 chr15 79742706 79742928 -23752046 - MTD LTR MaLR -209 210 1 5 1193 225 0 0 0 chr15 79743413 79743438 -23751536 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1193 302 304 0 87 chr15 79743476 79743491 -23751483 + MT2B LTR ERVL 150 153 -448 5 1193 518 170 18 88 chr15 79743491 79743633 -23751341 + B1_Mur4 SINE Alu 2 134 -15 5 1193 412 242 8 48 chr15 79743688 79743814 -23751160 - B1_Mur1 SINE Alu 0 149 29 5 1193 1184 35 7 27 chr15 79743819 79743968 -23751006 - B1_Mus2 SINE Alu -1 146 1 5 1193 301 284 0 39 chr15 79744031 79744108 -23750866 - PB1D10 SINE Alu -7 110 37 5 1193 1088 72 0 19 chr15 79744118 79744275 -23750699 - B2_Mm2 SINE B2 -40 155 2 5 1193 908 124 239 17 chr15 79744610 79744790 -23750184 + URR1A DNA MER1_type 5 224 -2 5 1193 339 25 0 0 chr15 79745051 79745091 -23749883 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1193 24 0 0 0 chr15 79748644 79748668 -23746306 + AT_rich Low_complexity Low_complexity 1 24 0 5 1193 298 270 180 0 chr15 79752070 79752170 -23742804 + PB1D9 SINE Alu 3 120 0 5 1193 1335 129 60 23 chr15 79752204 79752419 -23742555 - URR1B DNA MER1_type -2 223 1 5 1193 799 215 133 11 chr15 79752496 79752684 -23742290 + B3 SINE B2 2 212 -4 5 1193 521 187 36 27 chr15 79752697 79752807 -23742167 + PB1D9 SINE Alu 9 119 -1 5 1193 183 80 0 0 chr15 79753071 79753096 -23741878 + (G)n Simple_repeat Simple_repeat 1 25 0 5 1193 1513 37 21 11 chr15 79753346 79753535 -23741439 + B2_Mm1a SINE B2 1 191 -2 5 1193 237 342 0 0 chr15 79754191 79754264 -23740710 + MIR SINE MIR 24 96 -166 5 1193 762 197 13 33 chr15 79754495 79754647 -23740327 - B1_Mur4 SINE Alu -1 149 1 5 1193 1257 83 44 6 chr15 79754675 79754830 -23740144 + B2_Mm2 SINE B2 2 158 -37 5 1193 180 0 0 0 chr15 79754830 79754850 -23740124 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 5 1193 1073 88 0 52 chr15 79754855 79755010 -23739964 - B1_Mus2 SINE Alu 0 147 1 5 1193 1257 83 44 6 chr15 79755010 79755029 -23739945 + B2_Mm2 SINE B2 170 188 -7 5 1193 362 136 15 0 chr15 79755112 79755178 -23739796 + B1_Mur1 SINE Alu 82 148 -1 5 1193 524 347 74 34 chr15 79755196 79755670 -23739304 + Lx9 LINE L1 5602 6094 -1602 5 1193 691 250 49 27 chr15 79755749 79755934 -23739040 + B3A SINE B2 1 189 -9 5 1193 180 111 0 0 chr15 79755936 79755963 -23739011 + (TAA)n Simple_repeat Simple_repeat 1 27 0 5 1193 794 123 370 0 chr15 79755986 79756140 -23738834 - B3 SINE B2 -5 211 1 5 1193 210 313 36 12 chr15 79756166 79756250 -23738724 + B3A SINE B2 2 87 -111 5 1193 438 269 92 56 chr15 79756178 79756320 -23738654 + RSINE1 SINE B4 15 161 -4 5 1193 638 142 125 0 chr15 79756313 79756433 -23738541 + B1_Mur4 SINE Alu 16 150 0 5 1193 745 249 56 25 chr15 79756481 79756679 -23738295 + B3 SINE B2 1 204 -12 5 1193 1004 169 21 10 chr15 79756718 79756910 -23738064 + B2_Mm2 SINE B2 1 194 -1 5 1193 379 0 0 38 chr15 79757036 79757089 -23737885 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1193 180 0 0 0 chr15 79757089 79757108 -23737866 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 1193 513 118 0 76 chr15 79757112 79757204 -23737770 - B1_Mus2 SINE Alu -13 134 50 5 1193 198 189 113 0 chr15 79757854 79757907 -23737067 - MIR SINE MIR -119 143 85 5 1193 313 316 58 25 chr15 79760472 79760592 -23734382 + MIRc SINE MIR 20 143 -125 5 1193 33 0 0 0 chr15 79760610 79760643 -23734331 + AT_rich Low_complexity Low_complexity 1 33 0 5 1193 540 0 0 0 chr15 79762200 79762260 -23732714 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 1193 217 330 175 0 chr15 79762494 79762591 -23732383 + MIR SINE MIR 32 145 -63 5 1193 431 232 32 0 chr15 79763412 79763507 -23731467 + PB1D10 SINE Alu 17 114 -3 5 1193 482 230 226 18 chr15 79763518 79763686 -23731288 + B3 SINE B2 2 204 -12 5 1193 543 229 0 0 chr15 79763722 79763831 -23731143 + B1_Mur4 SINE Alu 6 114 -36 5 1193 276 280 73 88 chr15 79764494 79764698 -23730276 + L1MEe LINE L1 95 295 -4559 5 1193 477 0 0 0 chr15 79765377 79765430 -23729544 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1193 755 83 25 0 chr15 79765593 79765713 -23729261 - B1_Mur4 SINE Alu 0 150 28 5 1193 351 0 0 0 chr15 79765777 79765816 -23729158 + (GA)n Simple_repeat Simple_repeat 2 40 0 5 1193 225 0 0 0 chr15 79766026 79766051 -23728923 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1193 685 176 92 102 chr15 79766467 79766663 -23728311 - B2_Mm2 SINE B2 -1 194 1 5 1193 1665 36 0 20 chr15 79766696 79766893 -23728081 - B2_Mm1t SINE B2 0 193 1 5 1193 1515 68 16 0 chr15 79767179 79767370 -23727604 + B2_Mm2 SINE B2 2 195 0 5 1193 374 250 28 37 chr15 79767529 79767637 -23727337 + PB1D9 SINE Alu 12 118 -2 5 1193 411 272 58 0 chr15 79767700 79767803 -23727171 + PB1D7 SINE Alu 12 120 0 5 1193 27 0 0 0 chr15 79767859 79767886 -23727088 + AT_rich Low_complexity Low_complexity 1 27 0 5 1193 3440 228 43 88 chr15 79767955 79768880 -23726094 + RMER19B LTR ERVK 1 884 -18 5 1193 1382 71 38 0 chr15 79768890 79769073 -23725901 + B2_Mm2 SINE B2 1 190 -5 5 1193 534 286 9 28 chr15 79769076 79769260 -23725714 + B3 SINE B2 13 184 -11 5 1193 1116 68 7 39 chr15 79769297 79769450 -23725524 - B1_Mus1 SINE Alu 0 148 1 5 1193 456 254 18 0 chr15 79770047 79770157 -23724817 + B3 SINE B2 7 118 -98 5 1193 369 0 0 0 chr15 79770180 79770221 -23724753 + (T)n Simple_repeat Simple_repeat 1 41 0 5 1193 1316 14 0 0 chr15 79770221 79770368 -23724606 - B1_Mm SINE Alu 0 147 1 5 1193 1210 68 0 0 chr15 79770630 79770778 -23724196 - B1_Mus1 SINE Alu 0 148 1 6 1193 390 221 192 0 chr15 79770779 79770883 -23724091 + B1_Mus2 SINE Alu 13 136 -11 6 1193 460 45 15 15 chr15 79770895 79770963 -23724011 + (GGA)n Simple_repeat Simple_repeat 3 70 0 6 1193 497 327 69 60 chr15 79771133 79771465 -23723509 - Lx7 LINE L1 -1770 5926 5592 6 1193 699 189 29 58 chr15 79771514 79771688 -23723286 - B2_Mm2 SINE B2 -26 169 1 6 1193 428 211 122 9 chr15 79771728 79771843 -23723131 + ID_B1 SINE B4 91 218 -6 6 1193 601 198 0 0 chr15 79771847 79771953 -23723021 + B3 SINE B2 1 106 -110 6 1193 320 365 40 78 chr15 79772198 79772569 -23722405 + L1ME3B LINE L1 5529 5885 -355 6 1193 292 264 80 54 chr15 79772645 79772757 -23722217 + PB1D10 SINE Alu 2 116 -1 6 1193 871 163 0 26 chr15 79772932 79773083 -23721891 + B1_Mus2 SINE Alu 1 147 0 6 1193 569 312 148 40 chr15 79773083 79773460 -23721514 + RMER15-int LTR ERVL 1782 2199 -2800 6 1193 357 197 28 0 chr15 79773486 79773557 -23721417 + RMER15-int LTR ERVL 2297 2369 -2630 6 1193 845 218 22 43 chr15 79773673 79773903 -23721071 - B4 SINE B4 -62 230 6 6 1193 1750 158 78 12 chr15 79773890 79774235 -23720739 - ORR1D1 LTR MaLR -6 368 1 6 1193 243 0 0 0 chr15 79775350 79775377 -23719597 + (CAG)n Simple_repeat Simple_repeat 2 28 0 6 1193 1912 113 171 43 chr15 79775716 79775870 -23719104 - MTA_Mm LTR MaLR 0 396 203 6 1193 1034 70 0 84 chr15 79775870 79776025 -23718949 - B1_Mm SINE Alu -5 142 1 6 1193 1566 67 0 0 chr15 79776030 79776223 -23718751 - B2_Mm1a SINE B2 0 193 1 6 1193 1912 113 171 43 chr15 79776223 79776412 -23718562 - MTA_Mm LTR MaLR -194 202 2 6 1193 280 282 0 14 chr15 79776939 79777011 -23717963 - MIR SINE MIR -100 162 92 6 1193 622 156 2 33 chr15 79777122 79777265 -23717709 - B1_Mur4 SINE Alu 0 150 12 6 1193 199 266 39 0 chr15 79777265 79777341 -23717633 - MIR SINE MIR -90 178 94 6 1193 598 207 32 123 chr15 79777379 79777566 -23717408 - B3 SINE B2 -46 170 1 6 1193 439 304 28 49 chr15 79777594 79777736 -23717238 - RSINE1 SINE B4 -26 139 1 6 1193 349 125 158 24 chr15 79777875 79777957 -23717017 + MT2A LTR ERVL 1 93 -440 6 1193 799 18 89 0 chr15 79777958 79778070 -23716904 - B1_Mm SINE Alu 0 147 26 6 1193 871 82 322 20 chr15 79778076 79778225 -23716749 - B2_Mm2 SINE B2 -1 194 1 6 1193 681 238 129 46 chr15 79778231 79778574 -23716400 + MT2A LTR ERVL 92 599 -2 6 1193 237 284 83 10 chr15 79778990 79779086 -23715888 + MIRb SINE MIR 58 160 -108 6 1193 917 134 42 0 chr15 79779231 79779373 -23715601 - B1_Mur2 SINE Alu -1 148 1 6 1193 25 0 0 0 chr15 79779373 79779398 -23715576 + AT_rich Low_complexity Low_complexity 1 25 0 6 1193 678 160 17 0 chr15 79779527 79779646 -23715328 + B1F2 SINE Alu 14 134 -15 6 1193 546 43 0 0 chr15 79779652 79779721 -23715253 + (GA)n Simple_repeat Simple_repeat 2 70 0 6 1193 370 184 68 7 chr15 79782149 79782240 -23712734 - B1_Mur2 SINE Alu -15 134 18 6 1193 451 261 18 26 chr15 79783066 79783180 -23711794 - PB1D10 SINE Alu -1 116 4 6 1193 204 154 0 25 chr15 79784018 79784058 -23710916 + (TCTG)n Simple_repeat Simple_repeat 1 39 0 6 1193 250 264 172 0 chr15 79784289 79784376 -23710598 + PB1D10 SINE Alu 1 102 -15 6 1193 532 188 197 28 chr15 79784403 79784545 -23710429 + B3 SINE B2 41 206 -10 6 1193 1358 243 39 8 chr15 79784545 79784902 -23710072 + Lx9 LINE L1 7147 7514 -130 6 1193 306 251 40 79 chr15 79784919 79785096 -23709878 + Lx9 LINE L1 7460 7629 -15 6 1193 494 249 243 23 chr15 79785114 79785291 -23709683 - B3 SINE B2 0 216 1 6 1193 534 133 0 137 chr15 79785327 79785466 -23709508 + B1_Mur4 SINE Alu 9 128 -22 6 1193 437 198 0 12 chr15 79785477 79785556 -23709418 + ID_B1 SINE B4 129 206 -18 6 1193 3269 166 145 83 chr15 79785556 79785896 -23709078 + RMER17B LTR ERVK 1 432 -526 6 1193 654 0 11 23 chr15 79785896 79785984 -23708990 + (TTCTC)n Simple_repeat Simple_repeat 5 91 0 6 1193 3269 166 145 83 chr15 79785984 79786530 -23708444 + RMER17B LTR ERVK 433 942 -16 6 1193 236 53 0 26 chr15 79786550 79786589 -23708385 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 6 1193 811 228 57 34 chr15 79786593 79786802 -23708172 + B3 SINE B2 3 216 0 6 1193 186 43 0 0 chr15 79787183 79787206 -23707768 + (GCTG)n Simple_repeat Simple_repeat 4 26 0 6 1193 232 360 48 36 chr15 79788874 79789041 -23705933 - MLT1K LTR MaLR -343 252 84 6 1193 229 333 34 22 chr15 79789066 79789155 -23705819 + RMER1C Other Other 339 428 -914 6 1193 195 69 0 0 chr15 79789427 79789456 -23705518 + (CAAAC)n Simple_repeat Simple_repeat 1 29 0 6 1193 252 119 0 0 chr15 79789646 79789688 -23705286 + B1_Mur4 SINE Alu 109 150 0 6 1193 462 233 11 0 chr15 79789699 79789789 -23705185 + 4.5SRNA scRNA scRNA 2 92 -2 6 1193 529 178 151 8 chr15 79789800 79789919 -23705055 + B1_Mus1 SINE Alu 13 148 0 6 1193 1223 61 0 0 chr15 79789929 79790076 -23704898 + B1_Mus2 SINE Alu 1 147 0 6 1193 447 92 0 0 chr15 79790092 79790157 -23704817 + (GAAA)n Simple_repeat Simple_repeat 3 67 0 6 1193 2566 112 28 12 chr15 79790332 79790758 -23704216 + RMER17B LTR ERVK 2 434 -524 6 1193 1386 147 125 13 chr15 79790726 79791037 -23703937 + RMER17B LTR ERVK 613 958 0 6 1193 537 16 0 0 chr15 79791056 79791118 -23703856 + (GGAA)n Simple_repeat Simple_repeat 1 62 0 6 1193 338 219 24 0 chr15 79791349 79791431 -23703543 + ID SINE ID 2 85 -139 6 1193 295 254 14 0 chr15 79792403 79792474 -23702500 + MER2 DNA MER2_type 114 185 -160 6 1193 477 256 99 0 chr15 79792486 79792607 -23702367 - ID_B1 SINE B4 -2 222 90 6 1193 712 276 18 52 chr15 79792804 79793128 -23701846 - MTE2b LTR MaLR -3 376 1 6 1193 364 311 81 7 chr15 79793482 79793631 -23701343 + RSINE1 SINE B4 2 161 -4 6 1193 660 97 0 0 chr15 79793681 79793774 -23701200 - B1_Mus2 SINE Alu 0 147 55 6 1193 1681 175 204 11 chr15 79793839 79793949 -23701025 + MTC LTR MaLR 1 117 -304 6 1193 209 57 29 0 chr15 79793949 79793984 -23700990 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 6 1193 1167 44 0 0 chr15 79793984 79794119 -23700855 - B1_Mus1 SINE Alu -13 135 1 6 1193 1681 175 204 11 chr15 79794119 79794360 -23700614 + MTC LTR MaLR 118 420 -1 6 1193 417 217 65 11 chr15 79794374 79794467 -23700507 + B1F2 SINE Alu 46 143 -6 6 1193 1625 47 0 0 chr15 79794581 79794774 -23700200 - B2_Mm1a SINE B2 0 193 1 6 1193 354 284 33 33 chr15 79794831 79794951 -23700023 + PB1 SINE Alu 1 120 -7 6 1193 379 369 67 35 chr15 79794960 79795303 -23699671 + L1MDa LINE L1 27 380 -6253 6 1193 231 160 0 57 chr15 79795417 79795447 -23699527 + A-rich Low_complexity Low_complexity 1 30 0 6 1193 1165 57 0 0 chr15 79795447 79795587 -23699387 + B1_Mus1 SINE Alu 2 141 -7 6 1193 231 160 0 57 chr15 79795587 79795609 -23699365 + A-rich Low_complexity Low_complexity 31 50 0 6 1193 783 39 0 0 chr15 79795837 79795940 -23699034 - B1_Mus2 SINE Alu -43 104 2 6 1193 441 220 0 84 chr15 79795839 79795958 -23699016 - MT2B LTR ERVL -344 257 149 6 1193 267 202 207 35 chr15 79795960 79796047 -23698927 + L1MDa LINE L1 344 445 -6188 6 1193 332 236 37 16 chr15 79796199 79796329 -23698645 + B1F1 SINE Alu 6 144 -3 6 1193 180 0 0 0 chr15 79796337 79796357 -23698617 + (T)n Simple_repeat Simple_repeat 1 20 0 6 1193 1225 41 0 7 chr15 79796357 79796504 -23698470 - B1_Mm SINE Alu 0 147 2 6 1193 593 262 207 0 chr15 79796595 79796866 -23698108 + L1MDa LINE L1 2003 2329 -4304 6 1193 496 252 65 0 chr15 79796910 79797033 -23697941 + RSINE1 SINE B4 28 158 -7 6 1193 691 222 78 4 chr15 79797036 79797062 -23697912 + L1MDa LINE L1 2403 2428 -4205 6 1193 711 210 72 0 chr15 79797062 79797200 -23697774 + B1_Mur2 SINE Alu 2 149 0 6 1193 691 224 74 3 chr15 79797200 79797451 -23697523 + L1MDa LINE L1 2429 2697 -3840 6 1193 225 0 0 0 chr15 79797451 79797476 -23697498 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 6 1193 665 236 55 0 chr15 79797476 79797490 -23697484 + L1MDa LINE L1 2698 2713 -3824 6 1193 931 222 64 0 chr15 79797492 79797660 -23697314 + B3 SINE B2 1 181 -35 6 1193 270 0 0 0 chr15 79797660 79797690 -23697284 + (TA)n Simple_repeat Simple_repeat 1 30 0 6 1193 931 222 64 0 chr15 79797690 79797724 -23697250 + B3 SINE B2 182 215 -1 6 1193 236 268 0 0 chr15 79797741 79797797 -23697177 + B1F1 SINE Alu 1 56 -93 6 1193 289 215 92 0 chr15 79798974 79799039 -23695935 - MMERVK10C-int LTR ERVK -949 6632 6562 6 1193 1213 71 18 0 chr15 79802093 79802262 -23692712 + B2_Mm2 SINE B2 11 182 -13 6 1193 282 72 0 18 chr15 79802448 79802505 -23692469 + B2_Mm2 SINE B2 137 192 -3 6 1193 306 266 25 0 chr15 79802510 79802589 -23692385 + RSINE1 SINE B4 51 131 -34 6 1193 344 132 0 0 chr15 79802688 79802741 -23692233 - B1_Mus1 SINE Alu -80 68 16 6 1193 280 104 21 0 chr15 79803062 79803110 -23691864 + RLTR11A LTR ERVK 337 385 -143 6 1193 555 325 5 54 chr15 79803112 79803317 -23691657 - RodERV21-int LTR ERV1 -862 4129 3935 6 1193 306 314 64 64 chr15 79803360 79803556 -23691418 - RLTR4_MM-int LTR ERV1 -3388 4218 4002 6 1193 354 389 7 24 chr15 79803810 79804102 -23690872 - RLTR4_MM-int LTR ERV1 -3851 3750 3464 6 1193 534 174 108 56 chr15 79804534 79804660 -23690314 - RSINE1 SINE B4 -29 136 4 6 1193 183 80 0 0 chr15 79804664 79804689 -23690285 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1193 295 232 14 14 chr15 79804697 79804767 -23690207 - B4 SINE B4 -117 175 106 6 1193 584 217 44 52 chr15 79804774 79804910 -23690064 - B1_Mur1 SINE Alu -1 148 14 6 1193 288 267 35 149 chr15 79804912 79804971 -23690003 + MT2B LTR ERVL 109 233 -368 6 1193 492 79 0 73 chr15 79804971 79805053 -23689921 + B1_Mus2 SINE Alu 1 76 -71 6 1193 3834 35 5 0 chr15 79805053 79805487 -23689487 - RLTR10C LTR ERVK 0 436 1 6 1193 7735 33 4 1 chr15 79805487 79806415 -23688559 - MMERVK10C-int LTR ERVK 0 7581 6651 6 1193 8489 33 0 0 chr15 79806406 79807427 -23687547 - MMERVK10C-int LTR ERVK -1771 5810 4790 6 1193 1867 47 0 2 chr15 79807420 79807855 -23687119 - MMERVK10C-int LTR ERVK -1100 887 652 6 1193 309 68 23 0 chr15 79807858 79807902 -23687072 - MMERVK10C-int LTR ERVK -6405 137 93 6 1193 281 178 0 85 chr15 79807902 79808031 -23686943 + T-rich Low_complexity Low_complexity 2 119 0 6 1193 2072 38 15 4 chr15 79808075 79808339 -23686635 - MMERVK10C-int LTR ERVK -7314 267 1 6 1193 3834 35 5 0 chr15 79808339 79808773 -23686201 - RLTR10C LTR ERVK 0 436 1 6 1193 569 14 0 0 chr15 79808773 79808846 -23686128 + B1_Mus2 SINE Alu 71 143 -4 6 1193 652 182 0 0 chr15 79809674 79809784 -23685190 + B3 SINE B2 1 110 -106 6 1193 365 224 0 76 chr15 79809783 79809875 -23685099 + B1_Mur1 SINE Alu 64 148 -1 7 1193 526 292 46 93 chr15 79809975 79810052 -23684922 + L1MD1 LINE L1 5041 5108 -1038 7 1193 518 246 220 16 chr15 79810052 79810234 -23684740 + ID_B1 SINE B4 3 221 -3 7 1193 526 292 46 93 chr15 79810234 79810458 -23684516 + L1MD1 LINE L1 5109 5328 -818 7 1193 232 266 0 59 chr15 79810481 79810549 -23684425 + B4 SINE B4 83 146 -146 7 1193 356 256 0 12 chr15 79810496 79810579 -23684395 + PB1D10 SINE Alu 10 91 -26 7 1193 1104 166 69 15 chr15 79810652 79810854 -23684120 + B3 SINE B2 4 216 0 7 1193 582 138 0 0 chr15 79810876 79810956 -23684018 + ID4_ SINE ID 2 81 -2 7 1193 2528 254 62 36 chr15 79810967 79811774 -23683200 + L1MD1 LINE L1 5329 6156 -86 7 1193 5964 104 62 6 chr15 79811809 79812716 -23682258 - RMER17B LTR ERVK 0 958 1 7 1193 1499 202 93 18 chr15 79813361 79813704 -23681270 - ORR1D2 LTR MaLR 0 370 2 7 1193 387 0 0 0 chr15 79814043 79814086 -23680888 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 1193 342 80 0 0 chr15 79814861 79814911 -23680063 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 1193 225 0 0 0 chr15 79814973 79814998 -23679976 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 1193 448 298 0 0 chr15 79815344 79815458 -23679516 + PB1D10 SINE Alu 3 116 -1 7 1193 646 239 0 0 chr15 79815481 79815611 -23679363 + ID_B1 SINE B4 95 224 0 7 1193 575 282 107 0 chr15 79815679 79815856 -23679118 + B4A SINE B4 97 292 0 7 1193 195 69 0 0 chr15 79815874 79815903 -23679071 + (CAGA)n Simple_repeat Simple_repeat 4 32 0 7 1193 367 233 167 0 chr15 79816419 79816509 -23678465 - PB1D10 SINE Alu 0 117 13 7 1193 304 347 94 47 chr15 79816545 79816799 -23678175 - MLT1L LTR MaLR -224 386 121 7 1193 602 269 82 10 chr15 79816923 79817118 -23677856 + B4A SINE B4 2 210 -82 7 1193 351 65 0 0 chr15 79817157 79817203 -23677771 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1193 1403 45 6 0 chr15 79817648 79817827 -23677147 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 1193 454 19 0 0 chr15 79817827 79817879 -23677095 + (TTCC)n Simple_repeat Simple_repeat 2 53 0 7 1193 953 152 6 0 chr15 79817879 79818050 -23676924 + CT-rich Low_complexity Low_complexity 2 173 0 7 1193 1169 82 7 0 chr15 79818050 79818196 -23676778 - B1_Mus1 SINE Alu 0 148 2 7 1193 776 335 77 26 chr15 79818199 79818617 -23676357 - L1MB3 LINE L1 -1 6182 5736 7 1193 703 210 22 0 chr15 79818718 79818856 -23676118 - B1_Mur1 SINE Alu 0 149 9 7 1193 834 30 0 0 chr15 79818856 79818957 -23676017 + (TG)n Simple_repeat Simple_repeat 2 102 0 7 1193 388 238 0 29 chr15 79819446 79819561 -23675413 + B1_Mur1 SINE Alu 19 128 -21 7 1193 551 15 0 14 chr15 79819574 79819643 -23675331 + (GA)n Simple_repeat Simple_repeat 1 68 0 7 1193 1339 69 74 0 chr15 79820185 79820200 -23674774 - B2_Mm1a SINE B2 -4 189 175 7 1193 198 0 0 0 chr15 79820200 79820222 -23674752 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 7 1193 1339 69 74 0 chr15 79820222 79820381 -23674593 - B2_Mm1a SINE B2 -19 174 3 7 1193 373 199 40 0 chr15 79820497 79820590 -23674384 - B1F SINE Alu -46 102 6 7 1193 313 235 15 0 chr15 79820535 79820603 -23674371 - B4A SINE B4 -147 145 77 7 1193 618 181 69 0 chr15 79820623 79820739 -23674235 - B1_Mur2 SINE Alu -8 141 18 7 1193 227 309 47 93 chr15 79821172 79821322 -23673652 + MLT1N2 LTR MaLR 420 562 0 7 1193 222 216 11 33 chr15 79821633 79821724 -23673250 + (TGGA)n Simple_repeat Simple_repeat 2 90 0 7 1194 206 234 9 35 chr15 79823255 79823370 -23671604 + (TGGA)n Simple_repeat Simple_repeat 2 113 0 7 1194 367 272 11 0 chr15 79823386 79823478 -23671496 + (TGGA)n Simple_repeat Simple_repeat 3 95 0 7 1194 274 248 18 0 chr15 79823487 79823596 -23671378 + (TGAA)n Simple_repeat Simple_repeat 4 114 0 7 1194 260 318 0 34 chr15 79823619 79823707 -23671267 + (TGGA)n Simple_repeat Simple_repeat 3 87 0 7 1194 554 178 18 45 chr15 79824067 79824179 -23670795 + B1_Mur2 SINE Alu 31 139 -10 7 1194 4869 136 38 14 chr15 79824221 79825082 -23669892 + RMER13B LTR ERVK 19 900 -8 7 1194 334 335 96 18 chr15 79826738 79826905 -23668069 - MER91B DNA Tip100 0 190 11 7 1194 276 248 101 6 chr15 79828915 79829037 -23665937 + MIRb SINE MIR 1 130 -146 7 1194 871 144 247 6 chr15 79829770 79829944 -23665030 + B3 SINE B2 1 216 0 7 1194 270 0 0 0 chr15 79830356 79830386 -23664588 + (TC)n Simple_repeat Simple_repeat 1 30 0 7 1194 1074 246 105 11 chr15 79830394 79830661 -23664313 - B4A SINE B4 0 292 1 7 1194 197 347 13 13 chr15 79832385 79832461 -23662513 + MIRb SINE MIR 94 169 -99 7 1194 1168 69 0 7 chr15 79832638 79832784 -23662190 - B1_Mus2 SINE Alu 0 147 3 7 1194 423 172 216 82 chr15 79832800 79832971 -23662003 - B3 SINE B2 -1 194 1 7 1194 186 43 0 0 chr15 79833304 79833327 -23661647 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 7 1194 265 222 232 12 chr15 79833464 79833546 -23661428 + B1_Mur2 SINE Alu 41 140 -9 7 1194 246 32 0 0 chr15 79836993 79837024 -23657950 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 1194 216 0 0 0 chr15 79837157 79837181 -23657793 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 1194 272 210 0 16 chr15 79837332 79837395 -23657579 + PB1 SINE Alu 6 67 -60 7 1194 1910 207 82 10 chr15 79837399 79837518 -23657456 + MTD LTR MaLR 1 118 -301 7 1194 201 121 0 0 chr15 79837518 79837551 -23657423 + (ATTG)n Simple_repeat Simple_repeat 3 35 0 7 1194 1910 207 82 10 chr15 79837551 79837822 -23657152 + MTD LTR MaLR 119 418 -1 7 1194 573 170 57 36 chr15 79837828 79837968 -23657006 - B1_Mur1 SINE Alu 0 149 7 7 1194 217 307 13 0 chr15 79837971 79838046 -23656928 + PB1 SINE Alu 52 127 0 7 1194 308 345 95 0 chr15 79838403 79838551 -23656423 + MIR3 SINE MIR 25 186 -22 7 1194 300 320 21 0 chr15 79838866 79838963 -23656011 - MIRc SINE MIR -110 158 60 7 1194 411 341 68 0 chr15 79839125 79839301 -23655673 + MER20 DNA MER1_type 30 217 -2 7 1194 563 257 27 27 chr15 79839383 79839531 -23655443 + B1F SINE Alu 1 148 -1 7 1194 362 250 0 4 chr15 79839544 79839631 -23655343 + ID2 SINE ID 5 88 -64 7 1194 731 51 0 0 chr15 79839732 79839830 -23655144 + B1_Mus2 SINE Alu 50 147 0 7 1194 228 172 0 0 chr15 79839831 79839889 -23655085 + A-rich Low_complexity Low_complexity 1 58 0 7 1194 468 0 0 0 chr15 79840595 79840647 -23654327 + (CA)n Simple_repeat Simple_repeat 1 52 0 7 1194 420 20 0 0 chr15 79840647 79840695 -23654279 + (GA)n Simple_repeat Simple_repeat 2 50 0 7 1194 194 213 0 41 chr15 79841076 79841125 -23653849 - MIR3 SINE MIR -48 160 114 7 1194 21 0 0 0 chr15 79841206 79841227 -23653747 + GC_rich Low_complexity Low_complexity 1 21 0 7 1194 335 248 0 95 chr15 79841250 79841264 -23653710 + MT2B LTR ERVL 152 154 -447 7 1194 802 170 0 0 chr15 79841264 79841399 -23653575 + B1_Mus1 SINE Alu 1 135 -13 7 1194 213 39 0 0 chr15 79841399 79841425 -23653549 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7 1194 288 278 0 20 chr15 79842648 79842747 -23652227 + (CGTG)n Simple_repeat Simple_repeat 3 99 0 7 1194 27 29 0 0 chr15 79843119 79843153 -23651821 + GC_rich Low_complexity Low_complexity 1 34 0 7 1194 24 0 0 0 chr15 79843698 79843722 -23651252 + GC_rich Low_complexity Low_complexity 1 24 0 7 1194 206 174 0 21 chr15 79843760 79843807 -23651167 + (TCTG)n Simple_repeat Simple_repeat 2 47 0 7 1194 26 0 0 0 chr15 79844435 79844461 -23650513 + GC_rich Low_complexity Low_complexity 1 26 0 7 1194 203 247 0 27 chr15 79844554 79844629 -23650345 + (CCG)n Simple_repeat Simple_repeat 1 73 0 7 1194 240 291 80 26 chr15 79845704 79845842 -23649132 + MIR SINE MIR 21 161 -47 7 1194 491 259 223 16 chr15 79846701 79846943 -23648031 + B4 SINE B4 1 292 0 7 1194 295 316 50 25 chr15 79847288 79847408 -23647566 - MIR SINE MIR -93 169 47 7 1194 648 226 121 91 chr15 79847447 79847646 -23647328 - B3 SINE B2 -11 205 1 7 1194 1273 34 0 7 chr15 79847848 79847997 -23646977 - B1_Mus1 SINE Alu 0 148 1 7 1194 193 286 71 0 chr15 79848011 79848081 -23646893 - MIRm SINE MIR -22 254 180 7 1194 335 280 21 21 chr15 79848190 79848285 -23646689 + B3 SINE B2 55 149 -67 7 1194 240 35 0 0 chr15 79848311 79848340 -23646634 + (TAA)n Simple_repeat Simple_repeat 2 30 0 7 1194 1704 184 68 125 chr15 79849048 79849293 -23645681 - MTD LTR MaLR 0 419 206 7 1194 1437 62 17 0 chr15 79849293 79849470 -23645504 - B2_Mm2 SINE B2 -14 181 2 7 1194 1704 184 68 125 chr15 79849470 79849665 -23645309 - MTD LTR MaLR -214 205 4 7 1194 246 327 42 0 chr15 79850616 79850738 -23644236 - MIRb SINE MIR -98 170 44 7 1194 649 253 86 21 chr15 79851478 79851664 -23643310 - B3A SINE B2 0 198 1 7 1194 247 289 13 26 chr15 79851681 79851759 -23643215 + CT-rich Low_complexity Low_complexity 3 79 0 7 1194 570 167 8 88 chr15 79851764 79851889 -23643085 - PB1D9 SINE Alu -1 119 5 7 1194 378 319 26 77 chr15 79851989 79852145 -23642829 - ID_B1 SINE B4 0 224 77 7 1194 236 282 41 98 chr15 79852172 79852294 -23642680 - MT2B LTR ERVL -305 296 182 7 1194 476 211 43 9 chr15 79852193 79852308 -23642666 - B1F SINE Alu -27 122 4 7 1194 569 187 184 19 chr15 79853275 79853433 -23641541 + B3A SINE B2 6 189 -9 7 1194 840 136 20 29 chr15 79853435 79853627 -23641347 + B2_Mm2 SINE B2 3 194 -22 7 1194 679 309 20 5 chr15 79853627 79853822 -23641152 + B3A SINE B2 1 198 0 7 1194 719 217 57 66 chr15 79853822 79853841 -23641133 + B3 SINE B2 195 212 -4 7 1194 627 237 0 0 chr15 79853846 79853960 -23641014 + B1_Mur1 SINE Alu 2 115 -34 7 1194 312 198 186 0 chr15 79853952 79854038 -23640936 + B1_Mur1 SINE Alu 43 144 -5 7 1194 185 130 14 55 chr15 79854043 79854116 -23640858 + T-rich Low_complexity Low_complexity 2 71 0 7 1194 358 274 26 17 chr15 79854116 79854231 -23640743 - PB1D10 SINE Alu 0 117 2 7 1194 266 315 91 33 chr15 79856498 79856708 -23638266 - L2a LINE L2 -94 3332 3111 8 1194 944 191 202 0 chr15 79857510 79857698 -23637276 - URR1A DNA MER1_type 0 226 1 8 1194 403 303 70 7 chr15 79857979 79858141 -23636833 + MIRc SINE MIR 13 185 -83 8 1194 3255 36 29 0 chr15 79858716 79859101 -23635873 - MTA_Mm LTR MaLR 0 396 1 8 1194 239 299 100 93 chr15 79859574 79859714 -23635260 - B4A SINE B4 -151 141 1 8 1194 283 238 12 12 chr15 79859872 79859953 -23635021 + RSINE1 SINE B4 85 165 0 8 1194 917 234 135 27 chr15 79859975 79860234 -23634740 + B4A SINE B4 6 292 0 8 1194 1590 57 5 0 chr15 79860287 79860479 -23634495 + B2_Mm1t SINE B2 1 193 0 8 1194 1211 68 0 0 chr15 79860520 79860666 -23634308 + B1_Mm SINE Alu 1 146 -1 8 1194 769 326 83 33 chr15 79860695 79861212 -23633762 + L1MA5 LINE L1 5532 6074 -226 8 1194 1231 236 46 82 chr15 79861231 79861619 -23633355 - MTEb LTR MaLR 0 379 6 8 1194 585 232 139 14 chr15 79861620 79861764 -23633210 + B3A SINE B2 3 164 -34 8 1194 342 45 0 0 chr15 79861765 79861809 -23633165 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1194 484 233 155 37 chr15 79861825 79862012 -23632962 + B3 SINE B2 2 210 -6 8 1194 679 181 0 43 chr15 79862029 79862168 -23632806 + B1_Mur2 SINE Alu 17 149 0 8 1194 453 133 17 44 chr15 79862189 79862287 -23632687 + B1_Mus2 SINE Alu 26 147 0 8 1194 233 235 0 0 chr15 79862330 79862381 -23632593 + L1MA5 LINE L1 6138 6188 -112 8 1194 186 43 0 0 chr15 79862381 79862404 -23632570 + (T)n Simple_repeat Simple_repeat 1 23 0 8 1194 1614 32 16 5 chr15 79862411 79862601 -23632373 - B2_Mm1a SINE B2 0 193 2 8 1194 225 349 37 28 chr15 79862612 79862721 -23632253 + L1MA6 LINE L1 6190 6299 -1 8 1194 284 262 35 12 chr15 79862731 79862816 -23632158 + PB1D10 SINE Alu 18 104 -13 8 1194 2359 108 31 3 chr15 79862828 79863153 -23631821 + ORR1B1 LTR MaLR 1 336 -58 8 1194 4463 37 2 0 chr15 79863153 79863670 -23631304 - L1Md_F2 LINE L1 0 6582 6065 8 1194 2359 108 31 3 chr15 79863670 79863725 -23631249 + ORR1B1 LTR MaLR 337 390 -4 8 1194 503 272 16 8 chr15 79863748 79863874 -23631100 + RSINE1 SINE B4 35 161 -4 8 1194 200 218 36 0 chr15 79864137 79864192 -23630782 + MIR SINE MIR 93 149 -113 8 1194 1255 48 0 0 chr15 79864285 79864431 -23630543 + B1_Mus2 SINE Alu 1 146 -1 8 1194 666 24 0 0 chr15 79864431 79864496 -23630478 + (GA)n Simple_repeat Simple_repeat 1 65 0 8 1194 971 17 0 8 chr15 79864496 79864614 -23630360 + (GAA)n Simple_repeat Simple_repeat 3 119 0 8 1194 666 24 0 0 chr15 79864614 79864630 -23630344 + (GA)n Simple_repeat Simple_repeat 2 17 0 8 1194 793 181 0 63 chr15 79864745 79864904 -23630070 - B1_Mur3 SINE Alu 0 149 1 8 1194 573 289 61 38 chr15 79864956 79865168 -23629806 - MTEb LTR MaLR -145 234 18 8 1194 523 275 35 7 chr15 79865182 79865325 -23629649 + B1F1 SINE Alu 3 149 0 8 1194 180 328 145 0 chr15 79865350 79865481 -23629493 - L2a LINE L2 -344 3082 2933 8 1194 257 324 71 33 chr15 79866119 79866301 -23628673 + MIRb SINE MIR 35 223 -45 8 1194 648 133 0 48 chr15 79866324 79866513 -23628461 + (TG)n Simple_repeat Simple_repeat 1 180 0 8 1194 393 208 29 6 chr15 79866531 79866705 -23628269 + (TG)n Simple_repeat Simple_repeat 1 178 0 8 1194 219 154 38 19 chr15 79866713 79866766 -23628208 + (TATG)n Simple_repeat Simple_repeat 4 57 0 8 1194 285 266 23 33 chr15 79867248 79867382 -23627592 - MIR SINE MIR -102 174 36 8 1194 523 326 65 107 chr15 79867728 79868250 -23626724 - L1ME4a LINE L1 -1 6123 5624 8 1194 691 69 0 73 chr15 79868693 79868803 -23626171 + B1_Mus1 SINE Alu 1 102 -46 8 1194 207 0 0 0 chr15 79868803 79868826 -23626148 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 1194 789 203 7 20 chr15 79868841 79868992 -23625982 + B1_Mur4 SINE Alu 1 149 -1 8 1194 701 224 99 6 chr15 79869496 79869658 -23625316 + B3 SINE B2 38 214 -2 8 1194 706 209 8 54 chr15 79869663 79869876 -23625098 + B3 SINE B2 1 195 0 8 1194 394 298 50 106 chr15 79869876 79870094 -23624880 + ID_B1 SINE B4 19 224 0 8 1194 501 115 89 50 chr15 79869995 79870096 -23624878 + B1_Mus2 SINE Alu 43 147 0 8 1194 734 263 83 41 chr15 79870139 79870381 -23624593 - MTD LTR MaLR -30 389 138 8 1194 291 114 0 0 chr15 79870381 79870425 -23624549 + (TCC)n Simple_repeat Simple_repeat 2 45 0 8 1194 324 0 0 0 chr15 79870438 79870474 -23624500 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 8 1194 1098 82 0 0 chr15 79870474 79870609 -23624365 - B1_Mus1 SINE Alu -13 135 1 8 1194 666 169 135 23 chr15 79870612 79870745 -23624229 - B1_Mur2 SINE Alu -1 148 1 8 1194 325 289 109 22 chr15 79870746 79870867 -23624107 - MTD LTR MaLR -269 150 15 8 1194 3268 68 2 2 chr15 79870867 79871267 -23623707 + MTB LTR MaLR 1 400 0 8 1194 6494 95 10 82 chr15 79871267 79872433 -23622541 + MTB-int LTR MaLR 1 1082 -16 8 1194 372 345 41 0 chr15 79873101 79873120 -23621854 + B4 SINE B4 56 74 -218 8 1194 420 242 117 31 chr15 79873120 79873248 -23621726 + B1F2 SINE Alu 5 143 -6 8 1194 372 345 41 0 chr15 79873248 79873259 -23621715 + B4 SINE B4 75 91 -201 8 1194 755 199 0 20 chr15 79873259 79873408 -23621566 + B1_Mus2 SINE Alu 2 147 0 8 1194 25 0 0 0 chr15 79873408 79873433 -23621541 + AT_rich Low_complexity Low_complexity 1 25 0 8 1194 567 0 0 0 chr15 79873499 79873562 -23621412 + (CA)n Simple_repeat Simple_repeat 1 63 0 8 1194 611 161 161 0 chr15 79874255 79874379 -23620595 - B1_Mur4 SINE Alu -1 149 6 8 1194 293 237 69 49 chr15 79874290 79874392 -23620582 - MT2B LTR ERVL -344 257 154 8 1194 241 326 79 0 chr15 79874522 79874611 -23620363 + MIR SINE MIR 65 160 -102 8 1194 749 257 13 0 chr15 79874613 79874765 -23620209 + RSINE1 SINE B4 2 155 -10 8 1194 263 85 21 0 chr15 79874783 79874830 -23620144 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 1194 342 273 38 13 chr15 79875224 79875381 -23619593 + MLT1A1 LTR MaLR 235 406 -2 8 1194 469 263 43 21 chr15 79875406 79875546 -23619428 - B1F2 SINE Alu 0 149 7 8 1194 398 182 65 0 chr15 79875730 79875807 -23619167 + PB1D7 SINE Alu 26 107 -13 8 1194 1100 83 28 0 chr15 79875827 79875971 -23619003 - B1_Mus1 SINE Alu 0 148 1 8 1194 311 252 132 50 chr15 79876141 79876262 -23618712 - L1MC4a LINE L1 -193 7689 7559 8 1194 246 95 0 0 chr15 79876262 79876304 -23618670 + (TCTCTG)n Simple_repeat Simple_repeat 3 44 0 8 1194 755 221 127 0 chr15 79876305 79876486 -23618488 - B3 SINE B2 -11 205 2 8 1194 715 118 0 23 chr15 79876503 79876539 -23618435 + (TCC)n Simple_repeat Simple_repeat 2 35 0 8 1194 1320 134 0 5 chr15 79876539 79876727 -23618247 - B2_Mm2 SINE B2 -8 187 1 8 1194 715 118 0 23 chr15 79876727 79876743 -23618231 + (TCC)n Simple_repeat Simple_repeat 1 16 0 8 1194 1211 0 0 53 chr15 79876743 79876932 -23618042 + (TTC)n Simple_repeat Simple_repeat 2 180 0 8 1194 715 118 0 23 chr15 79876932 79877008 -23617966 + (TCC)n Simple_repeat Simple_repeat 3 78 0 8 1194 1332 68 0 0 chr15 79877008 79877184 -23617790 + (TTCTCC)n Simple_repeat Simple_repeat 3 178 0 8 1194 845 157 21 14 chr15 79877185 79877327 -23617647 - B1_Mur2 SINE Alu -5 144 2 8 1194 613 170 18 0 chr15 79877373 79877485 -23617489 - B3 SINE B2 -92 124 11 8 1194 186 200 25 0 chr15 79877928 79877968 -23617006 - MIR SINE MIR -63 145 105 8 1194 628 73 257 0 chr15 79878016 79878125 -23616849 - B2_Mm2 SINE B2 -58 137 1 8 1194 400 176 0 0 chr15 79878126 79878194 -23616780 + ID_B1 SINE B4 99 166 -58 8 1194 248 261 179 32 chr15 79879124 79879219 -23615755 + RSINE1 SINE B4 43 151 -14 8 1194 877 175 0 0 chr15 79879262 79879405 -23615569 + B1_Mus1 SINE Alu 5 147 -1 8 1194 196 308 108 21 chr15 79880086 79880179 -23614795 - MIRb SINE MIR -119 149 49 8 1194 638 266 13 0 chr15 79880363 79880517 -23614457 + ID_B1 SINE B4 67 222 -2 8 1194 22 0 0 0 chr15 79880523 79880545 -23614429 + AT_rich Low_complexity Low_complexity 1 22 0 8 1194 805 181 208 6 chr15 79881284 79881312 -23613662 + B3 SINE B2 3 30 -186 8 1194 225 0 0 0 chr15 79881312 79881337 -23613637 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 8 1194 805 181 208 6 chr15 79881337 79881486 -23613488 + B3 SINE B2 31 216 0 8 1194 393 311 98 13 chr15 79881514 79881667 -23613307 - ID_B1 SINE B4 -54 170 5 8 1194 193 314 128 0 chr15 79882857 79882943 -23612031 - MIRm SINE MIR -108 168 72 8 1194 645 189 43 19 chr15 79883189 79883351 -23611623 + MTD LTR MaLR 253 418 -1 8 1194 380 250 0 0 chr15 79883456 79883528 -23611446 + B1_Mur2 SINE Alu 22 93 -56 8 1194 261 297 114 26 chr15 79883528 79883570 -23611404 + B4 SINE B4 107 230 -62 8 1194 347 0 23 0 chr15 79883574 79883617 -23611357 + (CAAAAA)n Simple_repeat Simple_repeat 2 45 0 8 1194 614 271 31 3 chr15 79883617 79883790 -23611184 - B3A SINE B2 -3 213 32 8 1194 297 0 0 0 chr15 79883791 79883824 -23611150 + (TTG)n Simple_repeat Simple_repeat 2 34 0 8 1194 248 262 0 47 chr15 79883824 79883888 -23611086 - B1F SINE Alu -10 139 79 8 1194 277 265 194 10 chr15 79885475 79885578 -23609396 + ID_B1 SINE B4 6 127 -97 8 1194 775 178 7 27 chr15 79885896 79886046 -23608928 - B1_Mur3 SINE Alu -2 147 1 8 1194 619 285 111 58 chr15 79886118 79886379 -23608595 + B4 SINE B4 1 275 -17 8 1194 201 147 0 0 chr15 79886412 79886446 -23608528 + (CA)n Simple_repeat Simple_repeat 2 35 0 8 1194 216 0 0 0 chr15 79886732 79886756 -23608218 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 8 1194 546 16 0 0 chr15 79886768 79886831 -23608143 + (TG)n Simple_repeat Simple_repeat 2 64 0 8 1194 609 252 7 22 chr15 79886831 79886983 -23607991 - B3A SINE B2 -30 168 12 9 1194 223 314 14 28 chr15 79887551 79887623 -23607351 + B1_Mus1 SINE Alu 1 71 -77 9 1194 270 0 0 0 chr15 79887711 79887741 -23607233 + (A)n Simple_repeat Simple_repeat 1 30 0 9 1194 297 269 81 96 chr15 79887842 79888174 -23606800 - MLT1C LTR MaLR -33 434 45 9 1194 552 208 0 28 chr15 79888348 79888457 -23606517 - PB1D7 SINE Alu 0 120 15 9 1194 376 288 14 21 chr15 79888373 79888513 -23606461 - ID_B1 SINE B4 -48 176 41 9 1194 279 0 0 0 chr15 79888622 79888653 -23606321 + (TTGG)n Simple_repeat Simple_repeat 1 31 0 9 1194 475 220 20 0 chr15 79888658 79888758 -23606216 - ID_B1 SINE B4 -19 205 104 9 1194 1069 91 21 0 chr15 79888899 79889042 -23605932 + B1_Mus1 SINE Alu 3 148 0 9 1194 315 0 0 0 chr15 79889127 79889162 -23605812 + (CA)n Simple_repeat Simple_repeat 1 35 0 9 1194 1148 42 7 14 chr15 79889385 79889530 -23605444 - B1_Mur3 SINE Alu -5 144 1 9 1194 1168 114 0 6 chr15 79889554 79889570 -23605404 - B2_Mm2 SINE B2 -20 175 160 9 1194 243 0 0 0 chr15 79889570 79889597 -23605377 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 9 1194 1168 114 0 6 chr15 79889597 79889756 -23605218 - B2_Mm2 SINE B2 -36 159 1 9 1194 325 257 72 90 chr15 79889870 79889981 -23604993 - RSINE1 SINE B4 -42 123 15 9 1194 250 397 54 0 chr15 79890488 79890621 -23604353 + MIR3 SINE MIR 32 179 -97 9 1194 196 53 26 26 chr15 79890640 79890679 -23604295 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 9 1194 200 115 0 55 chr15 79890693 79890748 -23604226 + T-rich Low_complexity Low_complexity 1 52 0 9 1194 954 148 14 0 chr15 79890764 79890906 -23604068 - B1_Mus1 SINE Alu 0 148 5 9 1194 863 224 47 0 chr15 79890910 79891102 -23603872 - B3 SINE B2 -15 201 1 9 1194 387 0 0 0 chr15 79891546 79891589 -23603385 + (TC)n Simple_repeat Simple_repeat 1 43 0 9 1194 500 0 17 0 chr15 79891589 79891648 -23603326 + (CA)n Simple_repeat Simple_repeat 1 61 0 9 1194 226 213 117 10 chr15 79892101 79892215 -23602759 + MIRb SINE MIR 33 153 -55 9 1194 296 274 87 24 chr15 79893355 79893482 -23601492 - MIRb SINE MIR -113 155 21 9 1194 662 196 22 8 chr15 79894559 79894693 -23600281 + B1_Mur3 SINE Alu 14 149 0 9 1194 198 219 0 0 chr15 79894722 79894786 -23600188 + GA-rich Low_complexity Low_complexity 2 65 0 9 1194 1453 64 16 21 chr15 79894987 79895178 -23599796 - B2_Mm2 SINE B2 -5 190 1 9 1194 212 234 0 0 chr15 79895284 79895331 -23599643 - MIR SINE MIR -88 120 74 9 1194 771 279 39 10 chr15 79895956 79896162 -23598812 + B3 SINE B2 1 212 -4 9 1194 1062 43 42 14 chr15 79896204 79896346 -23598628 - B1_Mus2 SINE Alu -1 146 1 9 1194 21 0 0 0 chr15 79896355 79896376 -23598598 + AT_rich Low_complexity Low_complexity 1 21 0 9 1194 364 159 0 0 chr15 79896469 79896532 -23598442 - B1_Mur1 SINE Alu 0 149 87 9 1194 798 161 80 7 chr15 79896571 79896709 -23598265 - B1_Mur1 SINE Alu 0 149 2 9 1194 419 185 0 12 chr15 79896758 79896840 -23598134 - ID_B1 SINE B4 -54 170 90 9 1194 563 229 12 31 chr15 79897116 79897278 -23597696 + B3 SINE B2 58 216 0 9 1194 687 181 95 29 chr15 79898361 79898498 -23596476 + B1_Mur2 SINE Alu 4 149 0 9 1194 1024 231 38 14 chr15 79898526 79898737 -23596237 + B3 SINE B2 1 216 0 9 1194 417 86 0 0 chr15 79898741 79898799 -23596175 + (GAAA)n Simple_repeat Simple_repeat 1 58 0 9 1194 887 218 24 38 chr15 79898804 79899014 -23595960 + B3 SINE B2 10 216 0 9 1194 805 166 17 11 chr15 79899024 79899172 -23595802 + GA-rich Low_complexity Low_complexity 2 152 0 9 1194 1244 105 20 64 chr15 79899172 79899375 -23595599 + B2_Mm2 SINE B2 1 194 -1 9 1194 1087 106 81 38 chr15 79899381 79899567 -23595407 + B2_Mm2 SINE B2 1 194 -1 9 1194 805 166 17 11 chr15 79899567 79899659 -23595315 + polypurine Low_complexity Low_complexity 1 92 0 9 1194 23 0 0 0 chr15 79899894 79899917 -23595057 + AT_rich Low_complexity Low_complexity 1 23 0 9 1194 1008 201 27 8 chr15 79899917 79900122 -23594852 - B3 SINE B2 0 216 5 9 1194 1216 48 7 0 chr15 79900273 79900419 -23594555 + B1_Mus1 SINE Alu 1 147 -1 9 1194 727 214 155 0 chr15 79901050 79901203 -23593771 + B3 SINE B2 1 181 -35 9 1194 333 0 0 0 chr15 79901203 79901240 -23593734 + (CATA)n Simple_repeat Simple_repeat 2 38 0 9 1194 727 214 155 0 chr15 79901240 79901273 -23593701 + B3 SINE B2 182 215 -1 9 1194 645 145 51 0 chr15 79901279 79901396 -23593578 + B1_Mur3 SINE Alu 21 143 -6 9 1194 289 81 0 0 chr15 79901396 79901433 -23593541 + (GGA)n Simple_repeat Simple_repeat 1 37 0 9 1194 523 131 30 0 chr15 79901433 79901532 -23593442 + GA-rich Low_complexity Low_complexity 4 105 0 9 1194 207 0 0 0 chr15 79901744 79901767 -23593207 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 1194 333 252 128 16 chr15 79901785 79901910 -23593064 - ID_B1 SINE B4 0 224 86 9 1194 259 254 84 0 chr15 79902326 79902397 -23592577 - MIRm SINE MIR -142 134 58 9 1194 303 234 0 83 chr15 79903591 79903675 -23591299 - RSINE1 SINE B4 -1 164 88 9 1194 374 167 141 0 chr15 79903686 79903764 -23591210 + ID_B1 SINE B4 136 224 0 9 1194 203 61 30 0 chr15 79903766 79903799 -23591175 + (CAA)n Simple_repeat Simple_repeat 1 34 0 9 1194 234 316 7 81 chr15 79904135 79904167 -23590807 - YREP_Mm Unknown Unknown -1473 339 319 9 1194 531 217 34 17 chr15 79904167 79904284 -23590690 + B1F1 SINE Alu 1 119 -30 9 1194 479 256 59 15 chr15 79904284 79904302 -23590672 + ID_B1 SINE B4 82 222 -2 9 1194 187 279 0 0 chr15 79904458 79904469 -23590505 + L2c LINE L2 3329 3371 -16 9 1194 202 156 0 0 chr15 79904469 79904501 -23590473 + MIRm SINE MIR 231 262 -14 9 1194 1140 64 14 0 chr15 79904523 79904664 -23590310 + B1_Mus2 SINE Alu 2 144 -3 9 1194 224 30 30 0 chr15 79904664 79904697 -23590277 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 9 1194 1150 50 43 0 chr15 79908043 79908184 -23586790 + B1_Mus2 SINE Alu 1 147 0 9 1194 186 43 0 0 chr15 79908184 79908207 -23586767 + (A)n Simple_repeat Simple_repeat 1 23 0 9 1194 1186 55 7 0 chr15 79909483 79909629 -23585345 - B1_Mus1 SINE Alu 0 148 2 9 1194 217 288 81 70 chr15 79909657 79909743 -23585231 + B1F SINE Alu 3 89 -60 9 1194 939 131 22 44 chr15 79909791 79909974 -23585000 + B2_Mm2 SINE B2 8 186 -9 9 1194 343 303 172 68 chr15 79914402 79914457 -23580517 - B3 SINE B2 -32 184 133 9 1194 1396 100 11 5 chr15 79914457 79914648 -23580326 + B2_Mm2 SINE B2 2 193 -2 9 1194 889 145 169 0 chr15 79914648 79914814 -23580160 + B2_Mm2 SINE B2 2 195 0 9 1194 343 303 172 68 chr15 79914814 79914920 -23580054 - B3 SINE B2 -84 132 6 9 1194 25 0 0 0 chr15 79914963 79914988 -23579986 + AT_rich Low_complexity Low_complexity 1 25 0 9 1194 761 216 146 0 chr15 79915033 79915218 -23579756 - B3 SINE B2 -4 212 1 9 1194 1046 83 0 46 chr15 79915255 79915406 -23579568 - B1_Mus1 SINE Alu 0 148 5 9 1194 231 36 0 0 chr15 79915410 79915438 -23579536 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 9 1194 1346 96 6 0 chr15 79915438 79915616 -23579358 - B2_Mm2 SINE B2 -15 180 2 9 1194 272 207 48 29 chr15 79915635 79915760 -23579214 - B3 SINE B2 0 216 64 9 1194 935 110 81 0 chr15 79915768 79915904 -23579070 + B1_Mus2 SINE Alu 1 147 0 9 1194 1485 78 16 0 chr15 79916204 79916396 -23578578 + B2_Mm2 SINE B2 1 195 0 9 1194 207 0 0 0 chr15 79916396 79916419 -23578555 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 9 1194 771 224 7 0 chr15 79916432 79916575 -23578399 + B1_Mur1 SINE Alu 1 144 -5 9 1194 1227 55 0 0 chr15 79916612 79916758 -23578216 + B1_Mm SINE Alu 2 147 0 9 1194 288 77 0 0 chr15 79916760 79916799 -23578175 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 9 1194 301 261 0 0 chr15 79916811 79916876 -23578098 + ID SINE ID 1 65 -159 9 1194 512 270 64 44 chr15 79916994 79917383 -23577591 + RMER15 LTR ERVL 1 575 0 9 1194 588 262 35 60 chr15 79917435 79917634 -23577340 - B3A SINE B2 0 198 5 9 1194 1860 95 11 0 chr15 79917635 79917908 -23577066 - ORR1A2 LTR MaLR 0 327 52 9 1194 294 217 94 42 chr15 79917910 79918006 -23576968 - ID_B1 SINE B4 -20 204 104 9 1194 228 320 51 0 chr15 79918194 79918272 -23576702 - MER21B LTR ERV1 -778 85 4 9 1194 348 186 71 0 chr15 79918450 79918520 -23576454 + B1_Mur2 SINE Alu 58 132 -17 9 1194 210 37 0 0 chr15 79918520 79918547 -23576427 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 1194 1119 67 0 0 chr15 79918547 79918682 -23576292 - B1_Mus1 SINE Alu -9 139 5 9 1194 189 0 0 0 chr15 79918751 79918772 -23576202 + (T)n Simple_repeat Simple_repeat 1 21 0 9 1194 614 48 0 0 chr15 79918772 79918855 -23576119 - B1_Mus2 SINE Alu 0 147 65 9 1194 192 77 0 0 chr15 79918855 79918881 -23576093 + (T)n Simple_repeat Simple_repeat 1 26 0 9 1194 768 59 0 0 chr15 79918881 79918983 -23575991 - U6 snRNA snRNA -5 102 1 9 1194 23 0 0 0 chr15 79918992 79919015 -23575959 + AT_rich Low_complexity Low_complexity 1 23 0 9 1194 346 330 29 10 chr15 79919039 79919143 -23575831 + RSINE1 SINE B4 30 135 -30 9 1194 631 228 174 0 chr15 79919172 79919356 -23575618 + B3 SINE B2 1 216 0 9 1194 198 103 0 0 chr15 79919357 79919386 -23575588 + (A)n Simple_repeat Simple_repeat 1 29 0 9 1194 186 40 0 0 chr15 79919440 79919448 -23575526 + (A)n Simple_repeat Simple_repeat 1 8 0 9 1194 1004 73 73 0 chr15 79919448 79919585 -23575389 + B1_Mus2 SINE Alu 1 147 0 1 1194 186 40 0 0 chr15 79919585 79919601 -23575373 + (A)n Simple_repeat Simple_repeat 1 16 0 1 1194 388 113 34 25 chr15 79919830 79919931 -23575043 - B1_Mur4 SINE Alu -1 149 9 1 1194 660 262 63 15 chr15 79920391 79920596 -23574378 + B3 SINE B2 2 216 0 1 1194 306 296 31 23 chr15 79920683 79920811 -23574163 + ID_B1 SINE B4 94 222 -2 1 1194 1121 23 30 0 chr15 79920852 79920984 -23573990 + B1_Mm SINE Alu 1 136 -11 1 1194 200 59 29 0 chr15 79920984 79921018 -23573956 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1194 188 292 140 9 chr15 79921071 79921178 -23573796 - L2c LINE L2 -17 3370 3250 1 1194 180 77 0 0 chr15 79921475 79921501 -23573473 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1 1194 37 62 0 0 chr15 79921748 79921813 -23573161 + GC_rich Low_complexity Low_complexity 1 65 0 1 1194 206 261 163 43 chr15 79922380 79922472 -23572502 + MIR3 SINE MIR 106 208 0 1 1194 199 289 69 69 chr15 79923231 79923361 -23571613 - L2b LINE L2 -5 3370 3241 1 1194 24 67 0 0 chr15 79923741 79923786 -23571188 + AT_rich Low_complexity Low_complexity 1 45 0 1 1194 946 129 7 0 chr15 79923798 79923937 -23571037 + B1_Mus1 SINE Alu 5 144 -4 1 1194 552 253 45 13 chr15 79923947 79924103 -23570871 + ID_B1 SINE B4 64 224 0 1 1194 295 231 15 0 chr15 79924206 79924271 -23570703 + ID2 SINE ID 1 66 -17 1 1194 206 116 23 0 chr15 79924271 79924314 -23570660 + (GGGTG)n Simple_repeat Simple_repeat 1 44 0 1 1194 311 311 9 54 chr15 79924525 79924637 -23570337 + MER81 DNA AcHobo 1 107 -7 1 1194 1280 34 0 0 chr15 79925006 79925152 -23569822 + B1_Mus2 SINE Alu 2 147 0 1 1194 198 0 0 0 chr15 79925152 79925174 -23569800 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1194 968 203 43 24 chr15 79925174 79925381 -23569593 - ID_B1 SINE B4 -13 211 1 1 1194 583 217 71 61 chr15 79925398 79925594 -23569380 - B3A SINE B2 0 198 1 1 1194 520 196 20 0 chr15 79925620 79925722 -23569252 - PB1D9 SINE Alu 0 120 17 1 1194 559 39 26 0 chr15 79925738 79925816 -23569158 + (TTTC)n Simple_repeat Simple_repeat 2 81 0 1 1194 1357 120 16 0 chr15 79925831 79926022 -23568952 + B2_Mm2 SINE B2 1 194 -1 1 1194 246 242 97 0 chr15 79926026 79926088 -23568886 - ID_B1 SINE B4 -53 171 104 1 1194 195 301 137 4 chr15 79926301 79926425 -23568549 + MIR SINE MIR 14 152 -116 1 1194 1083 220 35 0 chr15 79926441 79926641 -23568333 - B3 SINE B2 -9 207 1 1 1194 1064 282 28 18 chr15 79926676 79926961 -23568013 + B4A SINE B4 3 290 -2 1 1194 183 333 0 0 chr15 79928687 79928756 -23566218 + L2b LINE L2 3096 3164 -211 1 1194 190 203 14 72 chr15 79929874 79929943 -23565031 - L2a LINE L2 -330 3096 3032 1 1194 275 196 151 11 chr15 79930329 79930422 -23564552 + B1F SINE Alu 39 144 -5 1 1194 945 59 87 22 chr15 79930431 79930553 -23564421 + B1_Mus2 SINE Alu 1 134 -13 1 1194 282 29 0 0 chr15 79930553 79930588 -23564386 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 1 1194 945 59 87 22 chr15 79930588 79930603 -23564371 + B1_Mus2 SINE Alu 135 147 0 1 1194 508 228 84 42 chr15 79930615 79930757 -23564217 + B3A SINE B2 27 174 -24 1 1194 413 254 132 14 chr15 79931633 79931777 -23563197 - RSINE1 SINE B4 -2 163 3 1 1194 693 208 6 70 chr15 79934549 79934720 -23560254 - RSINE1 SINE B4 0 165 6 1 1194 1524 48 11 0 chr15 79934792 79934981 -23559993 - B2_Mm1t SINE B2 -1 192 2 1 1194 189 0 0 0 chr15 79935329 79935350 -23559624 + (TC)n Simple_repeat Simple_repeat 1 21 0 1 1194 317 145 0 16 chr15 79935546 79935609 -23559365 + CT-rich Low_complexity Low_complexity 2 63 0 1 1194 412 277 21 0 chr15 79935613 79935707 -23559267 - B1_Mur2 SINE Alu -10 139 44 1 1194 440 171 49 11 chr15 79935805 79935906 -23559068 + B1_Mus2 SINE Alu 6 113 -36 1 1194 546 220 155 32 chr15 79936557 79936712 -23558262 + B3 SINE B2 19 192 -24 1 1194 1092 58 43 0 chr15 79936742 79936880 -23558094 - B1_Mm SINE Alu -3 144 1 1 1194 1135 252 39 25 chr15 79936912 79937197 -23557777 + B4A SINE B4 4 292 0 1 1194 221 309 0 0 chr15 79937206 79937261 -23557713 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1194 258 313 14 14 chr15 79937381 79937474 -23557500 + MIR SINE MIR 23 115 -153 1 1194 899 307 44 107 chr15 79937482 79937955 -23557019 - MLT1F2 LTR MaLR 0 569 119 1 1194 686 192 214 6 chr15 79938040 79938218 -23556756 - B3 SINE B2 0 216 2 1 1194 271 262 0 16 chr15 79938300 79938362 -23556612 - Lx8 LINE L1 -253 7220 7160 1 1194 469 198 15 108 chr15 79938369 79938499 -23556475 - PB1D9 SINE Alu 0 120 3 1 1194 3113 69 25 8 chr15 79938865 79939258 -23555716 - MTB LTR MaLR 0 400 1 1 1194 6648 106 45 71 chr15 79939258 79940385 -23554589 - MTB-int LTR MaLR 0 1098 1 1 1194 2052 58 3 23 chr15 79940385 79940708 -23554266 - MTB LTR MaLR 0 400 85 1 1194 222 297 47 0 chr15 79942351 79942415 -23552559 - B1F1 SINE Alu -41 108 42 1 1194 645 193 73 7 chr15 79942594 79942721 -23552253 + B1_Mus2 SINE Alu 2 137 -10 1 1194 333 0 0 0 chr15 79942721 79942758 -23552216 + (CAAAC)n Simple_repeat Simple_repeat 2 38 0 1 1194 1125 67 106 29 chr15 79943052 79943222 -23551752 - B2_Mm2 SINE B2 -11 184 2 1 1194 209 209 0 0 chr15 79943837 79943880 -23551094 - L2c LINE L2 -1 3386 3344 1 1194 1119 97 0 0 chr15 79943984 79944129 -23550845 + B1_Mus1 SINE Alu 2 146 -2 1 1194 240 139 70 0 chr15 79944381 79944424 -23550550 + L2b LINE L2 3318 3363 -12 1 1194 243 0 0 0 chr15 79944430 79944457 -23550517 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 1 1194 1019 145 204 0 chr15 79944890 79945076 -23549898 - URR1A DNA MER1_type 0 226 3 1 1194 263 360 268 24 chr15 79945662 79945916 -23549058 - MLT1J LTR MaLR -97 415 100 1 1194 190 143 0 79 chr15 79946852 79946890 -23548084 - L2b LINE L2 -23 3352 3318 1 1194 297 293 22 57 chr15 79947058 79947241 -23547733 - MIRb SINE MIR -86 182 4 1 1194 180 288 60 36 chr15 79947556 79947639 -23547335 - MIR SINE MIR -61 147 63 1 1194 21 36 0 0 chr15 79949665 79949693 -23545281 + AT_rich Low_complexity Low_complexity 1 28 0 1 1194 289 244 12 49 chr15 79950025 79950107 -23544867 - ID_B1 SINE B4 0 224 146 1 1194 495 306 25 25 chr15 79950106 79950267 -23544707 - RSINE1 SINE B4 -2 163 3 1 1194 580 294 124 43 chr15 79950267 79950473 -23544501 - B4A SINE B4 -62 230 8 1 1194 453 302 8 30 chr15 79950486 79950619 -23544355 - ID_B1 SINE B4 -93 131 2 1 1194 443 260 10 0 chr15 79950664 79950760 -23544214 - RSINE1 SINE B4 -21 144 48 1 1194 530 268 0 0 chr15 79950760 79950872 -23544102 - B1_Mur1 SINE Alu -37 112 1 1 1194 431 334 113 103 chr15 79950873 79950923 -23544051 - MER45R DNA Tip100 -710 871 834 1 1194 769 258 108 0 chr15 79950923 79951109 -23543865 - B3 SINE B2 -10 206 1 1 1194 431 334 113 103 chr15 79951109 79951298 -23543676 - MER45R DNA Tip100 -748 833 636 1 1194 1663 26 11 0 chr15 79951298 79951489 -23543485 + B2_Mm1a SINE B2 1 193 0 1 1194 431 334 113 103 chr15 79951489 79951510 -23543464 - MER45R DNA Tip100 -946 635 621 1 1194 890 244 0 90 chr15 79951510 79951744 -23543230 + B3 SINE B2 1 213 -3 1 1194 431 334 113 103 chr15 79951744 79951843 -23543131 - MER45R DNA Tip100 -961 620 529 1 1194 1488 68 16 0 chr15 79951843 79952033 -23542941 + B2_Mm1a SINE B2 1 193 0 1 1194 431 334 113 103 chr15 79952033 79952426 -23542548 - MER45R DNA Tip100 -1053 528 108 1 1194 641 256 61 61 chr15 79952426 79952655 -23542319 + B4A SINE B4 1 229 -63 1 1194 1663 31 0 10 chr15 79952656 79952848 -23542126 + B2_Mm1a SINE B2 1 190 -3 1 1194 1236 87 17 6 chr15 79952867 79953040 -23541934 + B2_Mm1a SINE B2 1 175 -18 1 1194 1018 122 13 0 chr15 79953113 79953269 -23541705 + B2_Mm2 SINE B2 3 160 -35 1 1194 357 24 0 0 chr15 79953272 79953314 -23541660 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 1 1194 267 341 12 0 chr15 79953324 79953409 -23541565 + (CA)n Simple_repeat Simple_repeat 1 86 0 1 1194 353 330 26 9 chr15 79953412 79953528 -23541446 - MER45R DNA Tip100 -1463 118 1 1 1195 1135 96 14 172 chr15 79954350 79954432 -23540542 - B2_Mm2 SINE B2 -14 181 105 1 1195 1223 61 0 0 chr15 79954432 79954580 -23540394 + B1_Mus1 SINE Alu 1 148 0 1 1195 1135 96 14 172 chr15 79954580 79954712 -23540262 - B2_Mm2 SINE B2 -91 104 1 1 1195 526 281 71 30 chr15 79954716 79954914 -23540060 - ID_B1 SINE B4 -15 209 4 1 1195 488 202 10 0 chr15 79954944 79955043 -23539931 + B1_Mur3 SINE Alu 2 101 -48 1 1195 237 302 56 19 chr15 79954948 79955056 -23539918 + B4A SINE B4 91 202 -90 1 1195 447 256 0 0 chr15 79955199 79955289 -23539685 - RSINE1 SINE B4 -70 95 6 1 1195 813 133 81 7 chr15 79955324 79955460 -23539514 + B1_Mur4 SINE Alu 5 150 0 1 1195 359 300 59 20 chr15 79955821 79955974 -23539000 + L2b LINE L2 2432 2590 -829 1 1195 753 299 23 19 chr15 79956373 79956588 -23538386 + B3 SINE B2 1 216 0 1 1195 364 236 0 14 chr15 79956602 79956675 -23538299 + RSINE1 SINE B4 3 74 -91 1 1195 234 0 0 0 chr15 79956728 79956754 -23538220 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1195 236 200 0 0 chr15 79956909 79956954 -23538020 + B2_Mm2 SINE B2 1 45 -150 1 1195 335 248 274 0 chr15 79956972 79957089 -23537885 - B1_Mur4 SINE Alu 0 150 2 1 1195 1391 113 0 5 chr15 79957119 79957314 -23537660 + B2_Mm2 SINE B2 1 194 -1 1 1195 1186 134 5 27 chr15 79957347 79957506 -23537468 + B2_Mm2 SINE B2 1 158 -37 1 1195 243 0 0 0 chr15 79957506 79957533 -23537441 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 1 1195 1186 134 5 27 chr15 79957533 79957557 -23537417 + B2_Mm2 SINE B2 159 180 -15 1 1195 652 161 85 0 chr15 79957564 79957682 -23537292 + B1_Mus2 SINE Alu 7 134 -13 1 1195 183 42 0 0 chr15 79957683 79957707 -23537267 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1 1195 582 247 206 0 chr15 79957711 79957881 -23537093 - B3 SINE B2 -10 206 2 1 1195 697 238 89 0 chr15 79957884 79958052 -23536922 + B3 SINE B2 33 215 -1 1 1195 925 121 8 0 chr15 79958071 79958203 -23536771 - B1_Mus2 SINE Alu -13 134 2 1 1195 1283 34 0 0 chr15 79958391 79958538 -23536436 - B1_Mm SINE Alu 0 147 1 1 1195 239 268 0 35 chr15 79958538 79958590 -23536384 + MTEb LTR MaLR 3 52 -327 1 1195 706 117 0 86 chr15 79958590 79958730 -23536244 + B1_Mur3 SINE Alu 1 128 -21 1 1195 1138 252 50 0 chr15 79958738 79959016 -23535958 + MTEb LTR MaLR 88 379 0 1 1195 243 316 14 63 chr15 79959024 79959166 -23535808 + L2b LINE L2 3146 3280 -95 1 1195 438 20 0 0 chr15 79959172 79959223 -23535751 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1195 524 204 0 0 chr15 79959255 79959343 -23535631 - B1F1 SINE Alu -61 88 1 1 1195 4604 134 95 10 chr15 79959511 79960334 -23534640 - RMER19B LTR ERVK -8 894 2 1 1195 884 150 71 0 chr15 79960416 79960556 -23534418 + B1_Mur4 SINE Alu 1 150 0 1 1195 1055 16 79 0 chr15 79960730 79960856 -23534118 + B1_Mus2 SINE Alu 1 136 -11 1 1195 343 0 43 0 chr15 79960856 79960903 -23534071 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1 1195 992 137 7 0 chr15 79961650 79961796 -23533178 + B1_Mus2 SINE Alu 1 147 0 1 1195 1014 73 0 0 chr15 79962312 79962449 -23532525 - B1_Mus1 SINE Alu -2 146 10 1 1195 235 289 7 14 chr15 79962350 79962494 -23532480 - ORR1B1-int LTR MaLR -755 754 612 1 1195 1109 119 68 0 chr15 79962511 79962688 -23532286 + B2_Mm2 SINE B2 1 189 -6 1 1195 217 275 42 42 chr15 79962702 79962774 -23532200 - PB1D7 SINE Alu -1 119 48 1 1195 992 54 131 0 chr15 79962792 79962922 -23532052 - B1_Mus2 SINE Alu 0 147 1 1 1195 275 265 20 48 chr15 79962946 79963029 -23531945 - PB1D7 SINE Alu -47 80 1 1 1195 211 333 0 0 chr15 79964047 79964110 -23530864 - MIR SINE MIR -168 94 32 1 1195 886 165 321 38 chr15 79965320 79965663 -23529311 + RMER10A LTR ERVL 1 440 -2 1 1195 344 276 240 29 chr15 79965978 79966153 -23528821 - B3 SINE B2 0 216 5 1 1195 377 271 221 0 chr15 79966164 79966286 -23528688 - B1_Mur1 SINE Alu 0 149 1 1 1195 408 296 72 44 chr15 79966295 79966319 -23528655 + CYRA11_Mm Unknown Y-chromosome 153 260 -357 1 1195 938 163 112 5 chr15 79966319 79966516 -23528458 - URR1A DNA MER1_type -2 224 7 1 1195 408 296 72 44 chr15 79966516 79966546 -23528428 + CYRA11_Mm Unknown Y-chromosome 261 410 -207 1 1195 1445 247 86 92 chr15 79966661 79967174 -23527800 - RLTR18B LTR ERVK -2 510 1 1 1195 514 186 0 19 chr15 79967360 79967464 -23527510 + B1_Mur4 SINE Alu 49 150 0 1 1195 380 250 69 20 chr15 79967482 79967584 -23527390 + PB1 SINE Alu 19 125 -2 1 1195 448 285 54 0 chr15 79967732 79967862 -23527112 + ID_B1 SINE B4 16 152 -72 1 1195 420 20 0 0 chr15 79968764 79968813 -23526161 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1195 2274 151 56 25 chr15 79969343 79969738 -23525236 - MTB_Mm LTR MaLR 0 407 1 1 1195 901 106 35 21 chr15 79970077 79970221 -23524753 - B1_Mur4 SINE Alu -1 149 4 1 1195 361 247 164 62 chr15 79970252 79970289 -23524685 - B3A SINE B2 0 198 167 1 1195 378 0 0 0 chr15 79970289 79970331 -23524643 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1195 361 247 164 62 chr15 79970331 79970470 -23524504 - B3A SINE B2 -32 166 4 1 1195 224 275 72 36 chr15 79970478 79970561 -23524413 - PB1 SINE Alu -6 121 36 1 1195 315 137 0 0 chr15 79970602 79970653 -23524321 + B3 SINE B2 1 51 -165 1 1195 251 345 18 9 chr15 79970690 79970801 -23524173 + MER113 DNA MER1_type 322 433 -88 1 1195 331 250 107 0 chr15 79971266 79971350 -23523624 - RSINE1 SINE B4 -69 96 4 1 1195 885 134 35 14 chr15 79971372 79971516 -23523458 - B1_Mur2 SINE Alu -2 147 1 1 1195 326 317 164 16 chr15 79971836 79972025 -23522949 + B4A SINE B4 76 292 0 1 1195 364 294 12 6 chr15 79972061 79972222 -23522752 + (CA)n Simple_repeat Simple_repeat 1 162 0 1 1195 214 292 21 0 chr15 79972257 79972353 -23522621 + (CA)n Simple_repeat Simple_repeat 1 98 0 1 1195 28 0 0 0 chr15 79972509 79972537 -23522437 + AT_rich Low_complexity Low_complexity 1 28 0 1 1195 377 227 128 48 chr15 79972542 79972667 -23522307 + B1_Mur2 SINE Alu 5 139 -10 1 1195 742 209 56 39 chr15 79972685 79972864 -23522110 - B3 SINE B2 -4 212 31 1 1195 465 172 256 8 chr15 79972879 79972996 -23521978 - B1_Mus1 SINE Alu 0 148 3 1 1195 1156 57 0 34 chr15 79973045 79973191 -23521783 + B1_Mus2 SINE Alu 2 142 -5 1 1195 241 217 16 32 chr15 79973980 79974042 -23520932 - RMER6B LTR ERVK -33 428 368 1 1195 445 250 48 9 chr15 79974667 79974772 -23520202 - PB1D10 SINE Alu -5 112 4 1 1195 288 242 22 0 chr15 79974815 79974906 -23520068 + L1ME1 LINE L1 4625 4717 -1429 1 1195 974 127 160 0 chr15 79974917 79975098 -23519876 + URR1A DNA MER1_type 1 210 -16 1 1195 455 281 33 66 chr15 79975356 79975539 -23519435 + ID_B1 SINE B4 36 212 -12 1 1195 798 112 32 0 chr15 79975415 79975540 -23519434 + B1_Mus1 SINE Alu 9 137 -11 1 1195 588 287 152 14 chr15 79975556 79975991 -23518983 + L1ME1 LINE L1 5111 5605 -574 1 1195 464 305 62 43 chr15 79975995 79976204 -23518770 + B3 SINE B2 1 213 -3 1 1195 251 247 358 0 chr15 79976216 79976297 -23518677 - PB1D9 SINE Alu -9 111 2 1 1195 637 332 45 29 chr15 79976418 79976796 -23518178 + L1ME1 LINE L1 5617 6000 -179 1 1195 599 143 105 0 chr15 79977140 79977245 -23517729 - PB1D9 SINE Alu -3 117 2 1 1195 244 261 46 0 chr15 79977364 79977429 -23517545 - B3 SINE B2 -7 209 142 1 1195 740 237 78 5 chr15 79981153 79981328 -23513646 - B3 SINE B2 -7 209 21 1 1195 251 333 46 28 chr15 79981328 79981436 -23513538 - RLTR18B LTR ERVK -2 510 401 1 1195 1078 196 23 9 chr15 79981428 79981644 -23513330 + URR1B DNA MER1_type 7 225 0 1 1195 736 273 128 102 chr15 79981649 79981769 -23513205 - RLTR18B LTR ERVK -105 511 380 1 1195 1155 82 7 0 chr15 79981769 79981916 -23513058 - B1_Mus1 SINE Alu 0 148 1 1 1195 1142 237 52 85 chr15 79981916 79982198 -23512776 - RLTR18B LTR ERVK -237 379 92 1 1195 1473 63 10 10 chr15 79982198 79982390 -23512584 - B2_Mm1a SINE B2 0 193 2 1 1195 1142 232 42 83 chr15 79982390 79982484 -23512490 - RLTR18B LTR ERVK -419 93 1 1 1195 497 277 97 128 chr15 79983620 79983980 -23510994 - ORR1E LTR MaLR -4 355 7 1 1195 206 333 30 40 chr15 79984661 79984761 -23510213 - MIR SINE MIR -90 172 74 1 1195 21 0 0 0 chr15 79985594 79985615 -23509359 + AT_rich Low_complexity Low_complexity 1 21 0 1 1195 297 283 130 24 chr15 79985615 79985738 -23509236 - ID_B1 SINE B4 -2 222 87 1 1195 271 261 77 51 chr15 79985783 79985900 -23509074 + ID_B1 SINE B4 105 224 0 1 1195 315 250 84 59 chr15 79986753 79986872 -23508102 - PB1 SINE Alu -5 122 1 1 1195 557 250 23 0 chr15 79986984 79987116 -23507858 - B1F2 SINE Alu -1 148 14 1 1195 234 0 0 0 chr15 79987188 79987214 -23507760 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1195 472 216 79 26 chr15 79987452 79987566 -23507408 - PB1D9 SINE Alu 0 120 1 1 1195 263 265 0 14 chr15 79992226 79992295 -23502679 - MIR SINE MIR -182 80 13 1 1195 1006 245 0 19 chr15 79994460 79994668 -23500306 + B3 SINE B2 1 204 -12 1 1195 431 222 0 85 chr15 79994678 79994796 -23500178 + B1_Mur2 SINE Alu 1 108 -41 1 1195 535 273 98 11 chr15 79994841 79995015 -23499959 + B3A SINE B2 2 190 -8 1 1195 894 171 14 7 chr15 79995033 79995180 -23499794 + B1_Mur1 SINE Alu 1 148 -1 1 1195 1189 68 7 0 chr15 79995183 79995329 -23499645 + B1_Mus1 SINE Alu 2 148 0 1 1195 640 268 72 0 chr15 79995508 79995661 -23499313 - RSINE1 SINE B4 0 165 2 1 1195 1095 54 0 0 chr15 79996347 79996476 -23498498 + B1_Mus1 SINE Alu 5 133 -15 1 1195 3478 35 0 2 chr15 79996476 79996872 -23498102 + MTA_Mm LTR MaLR 2 396 0 1 1195 197 33 0 32 chr15 79996882 79996913 -23498061 + (CAAAAA)n Simple_repeat Simple_repeat 4 33 0 1 1195 494 294 172 0 chr15 79997011 79997174 -23497800 + ID_B1 SINE B4 1 191 -33 1 1195 492 246 18 0 chr15 79997186 79997300 -23497674 + RSINE1 SINE B4 3 118 -47 1 1195 225 338 38 38 chr15 79997331 79997411 -23497563 + ID4_ SINE ID 2 81 -2 1 1195 955 131 0 33 chr15 79997420 79997570 -23497404 + B1_Mur3 SINE Alu 1 145 -4 1 1195 405 0 0 0 chr15 79997955 79998000 -23496974 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1195 250 262 61 24 chr15 79998570 79998652 -23496322 - MLT1H LTR MaLR -345 204 120 1 1195 236 355 26 66 chr15 79998738 79998889 -23496085 + B3A SINE B2 54 198 0 1 1195 339 271 125 52 chr15 79998892 79999028 -23495946 - RSINE1 SINE B4 -17 148 3 1 1195 1475 83 5 0 chr15 79999239 79999431 -23495543 - B2_Mm1a SINE B2 0 193 1 1 1195 1252 48 0 0 chr15 79999670 79999817 -23495157 + B1_Mus1 SINE Alu 2 148 0 1 1195 213 217 22 0 chr15 80001068 80001114 -23493860 + GA-rich Low_complexity Low_complexity 1 47 0 1 1195 333 0 0 0 chr15 80001355 80001392 -23493582 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1195 185 159 65 43 chr15 80001544 80001590 -23493384 - MIR SINE MIR -135 127 81 3 1195 191 286 54 0 chr15 80001644 80001700 -23493274 - L2c LINE L2 -228 3159 3101 4 1195 431 186 134 0 chr15 80002915 80003012 -23491962 + B3A SINE B2 2 111 -87 5 1195 1129 60 0 13 chr15 80003041 80003193 -23491781 + B1_Mur4 SINE Alu 1 150 0 6 1195 228 86 0 0 chr15 80003803 80003838 -23491136 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 1195 217 127 91 0 chr15 80003910 80003965 -23491009 + G-rich Low_complexity Low_complexity 5 64 0 8 1195 32 106 0 0 chr15 80004028 80004151 -23490823 + GC_rich Low_complexity Low_complexity 1 123 0 9 1195 28 48 0 0 chr15 80004188 80004230 -23490744 + GC_rich Low_complexity Low_complexity 1 42 0 1 1195 409 213 0 0 chr15 80005490 80005565 -23489409 + tRNA-His-CAY tRNA tRNA 1 75 0 1 1195 651 197 0 0 chr15 80006031 80006267 -23488707 + (TG)n Simple_repeat Simple_repeat 1 236 0 1 1195 255 267 138 24 chr15 80006275 80006398 -23488576 + MIRb SINE MIR 85 221 -47 1 1195 272 274 172 26 chr15 80006943 80007059 -23487915 + MIR SINE MIR 27 159 -103 1 1195 1357 78 0 6 chr15 80007084 80007265 -23487709 - B2_Mm2 SINE B2 -14 181 2 1 1195 714 143 0 0 chr15 80007788 80007907 -23487067 + (TCC)n Simple_repeat Simple_repeat 2 120 0 1 1195 1253 96 36 46 chr15 80007910 80008106 -23486868 - B2_Mm2 SINE B2 0 195 2 1 1195 312 91 0 0 chr15 80008170 80008214 -23486760 + (TCC)n Simple_repeat Simple_repeat 1 44 0 1 1195 622 279 57 149 chr15 80008479 80008554 -23486420 - B4A SINE B4 -7 285 228 1 1195 781 223 91 5 chr15 80008554 80008752 -23486222 - B3 SINE B2 -1 215 1 2 1195 622 279 57 149 chr15 80008752 80008958 -23486016 - B4A SINE B4 -65 227 30 1 1195 1557 42 0 0 chr15 80008958 80009148 -23485826 - B2_Mm1a SINE B2 -3 190 1 2 1195 748 212 38 38 chr15 80009408 80009594 -23485380 - B3A SINE B2 -10 188 3 2 1195 184 302 0 0 chr15 80009797 80009850 -23485124 - MIRb SINE MIR -83 185 133 2 1195 535 239 19 112 chr15 80010749 80010871 -23484103 + B1_Mur1 SINE Alu 5 118 -31 2 1195 1397 148 54 60 chr15 80010871 80011202 -23483772 - ORR1A4 LTR MaLR 0 329 1 2 1195 535 239 19 112 chr15 80011202 80011239 -23483735 + B1_Mur1 SINE Alu 119 149 0 2 1195 508 225 18 0 chr15 80011280 80011391 -23483583 - RSINE1 SINE B4 -50 115 3 2 1195 305 273 58 39 chr15 80011391 80011494 -23483480 - BC1_Mm scRNA scRNA -46 106 2 2 1195 557 194 9 0 chr15 80012287 80012395 -23482579 + ORR1C1 LTR MaLR 5 113 -265 2 1195 1201 47 0 0 chr15 80013069 80013217 -23481757 + B1_Mus1 SINE Alu 1 148 0 2 1195 1016 103 0 27 chr15 80013562 80013712 -23481262 - B1_Mus1 SINE Alu -1 147 2 3 1195 1212 172 0 135 chr15 80014098 80014401 -23480573 + ORR1C1 LTR MaLR 111 372 -6 2 1195 415 272 39 31 chr15 80014515 80014644 -23480330 - B1F SINE Alu -19 130 1 3 1195 471 78 0 0 chr15 80014664 80014728 -23480246 + (CTTA)n Simple_repeat Simple_repeat 1 64 0 3 1195 1062 91 7 0 chr15 80014729 80014883 -23480091 - B2_Mm1a SINE B2 -38 155 1 3 1195 868 245 0 50 chr15 80015037 80015256 -23479718 - B3 SINE B2 -7 209 2 3 1195 606 340 15 10 chr15 80015276 80015472 -23479502 - B3A SINE B2 0 198 2 3 1195 802 88 71 8 chr15 80015931 80016057 -23478917 - RMER19B LTR ERVK -12 890 757 3 1195 923 92 23 0 chr15 80016063 80016194 -23478780 + B1_Mus1 SINE Alu 5 138 -10 3 1195 1069 95 87 17 chr15 80016206 80016378 -23478596 + B2_Mm2 SINE B2 5 188 -7 3 1195 366 80 0 0 chr15 80016388 80016438 -23478536 + (TTCA)n Simple_repeat Simple_repeat 4 53 0 3 1195 568 168 8 34 chr15 80016438 80016555 -23478419 - B2_Mm2 SINE B2 -36 159 46 4 1195 395 226 93 9 chr15 80017589 80017696 -23477278 - ID_B1 SINE B4 0 224 109 4 1195 610 148 359 19 chr15 80017852 80018011 -23476963 - B3 SINE B2 -3 213 1 4 1195 198 0 0 0 chr15 80018030 80018052 -23476922 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1195 561 183 8 25 chr15 80018084 80018195 -23476779 + B1_Mus2 SINE Alu 32 140 -7 4 1195 201 74 0 0 chr15 80018195 80018222 -23476752 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 4 1195 678 265 16 11 chr15 80018249 80018440 -23476534 - B3A SINE B2 -6 192 1 4 1195 810 322 84 3 chr15 80019060 80019371 -23475603 - RLTR18B LTR ERVK -9 503 168 4 1195 805 222 106 119 chr15 80019742 80019805 -23475169 - RMER10A LTR ERVL -9 433 367 4 1195 198 0 0 0 chr15 80019805 80019827 -23475147 + (GA)n Simple_repeat Simple_repeat 1 22 0 4 1195 805 222 106 119 chr15 80019827 80020142 -23474832 - RMER10A LTR ERVL -76 366 61 4 1195 457 222 9 36 chr15 80023102 80023214 -23471760 + ID_B1 SINE B4 111 219 -5 5 1195 233 204 0 0 chr15 80023220 80023269 -23471705 + (CAGAGA)n Simple_repeat Simple_repeat 6 54 0 5 1195 450 280 58 29 chr15 80024922 80025128 -23469846 - RLTR15 LTR ERVK -3 356 145 5 1195 269 26 26 0 chr15 80025189 80025227 -23469747 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 5 1195 378 186 0 0 chr15 80025353 80025423 -23469551 - ORR1A2 LTR MaLR -297 70 1 5 1195 7439 160 55 13 chr15 80025423 80026588 -23468386 - ORR1A2-int LTR MaLR 0 1509 289 5 1195 189 0 0 0 chr15 80026588 80026609 -23468365 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 5 1195 7439 160 55 13 chr15 80026609 80026891 -23468083 - ORR1A2-int LTR MaLR -1221 288 1 5 1195 1856 130 79 40 chr15 80026891 80027244 -23467730 - ORR1A2 LTR MaLR 0 367 1 5 1195 1560 11 16 0 chr15 80027442 80027627 -23467347 + B2_Mm1a SINE B2 2 189 -4 5 1195 333 195 164 39 chr15 80027652 80027780 -23467194 + MIRb SINE MIR 114 257 -11 5 1195 3566 136 58 10 chr15 80028664 80029251 -23465723 - MurERV4_19-int LTR ERVK -4950 830 216 5 1195 3254 148 35 38 chr15 80029251 80030317 -23464657 - ORR1A2-int LTR MaLR -817 1146 1 5 1195 1083 88 7 0 chr15 80030351 80030498 -23464476 - B1_Mus1 SINE Alu 0 148 1 5 1195 2047 125 6 0 chr15 80030498 80030818 -23464156 - ORR1A2 LTR MaLR -5 322 1 5 1195 4058 54 2 0 chr15 80031078 80031593 -23463381 - L1_Mus1 LINE L1 0 6567 6052 6 1195 262 238 159 0 chr15 80031895 80031958 -23463016 - B4A SINE B4 -4 288 216 6 1195 416 97 0 12 chr15 80031957 80032071 -23462903 - B2_Mm2 SINE B2 0 195 47 6 1195 1255 74 23 0 chr15 80032099 80032274 -23462700 - B2_Mm2 SINE B2 -14 181 3 6 1195 753 333 18 4 chr15 80032274 80032500 -23462474 - B4A SINE B4 -58 234 6 6 1195 182 300 115 26 chr15 80032840 80032953 -23462021 - MIRb SINE MIR -118 150 28 6 1195 3086 56 2 8 chr15 80033462 80033860 -23461114 + MTA_Mm LTR MaLR 1 396 0 6 1195 232 320 0 118 chr15 80034166 80034276 -23460698 + MTE2b LTR MaLR 82 178 -201 6 1195 1039 267 128 28 chr15 80034194 80034583 -23460391 + MLT2B3 LTR ERVL 127 554 0 6 1195 701 135 27 170 chr15 80035564 80035787 -23459187 - B2_Mm1a SINE B2 -2 191 1 6 1195 555 262 48 0 chr15 80036050 80036176 -23458798 - RSINE1 SINE B4 -31 134 3 6 1195 282 315 74 0 chr15 80036263 80036371 -23458603 - Ricksha_c DNA MuDR -1309 739 624 7 1195 447 337 83 10 chr15 80036374 80036566 -23458408 - MLT2B3 LTR ERVL -321 233 28 7 1195 187 365 73 45 chr15 80036911 80037089 -23457885 + MIR SINE MIR 73 255 -7 7 1195 196 312 85 11 chr15 80037257 80037351 -23457623 + MIRb SINE MIR 47 147 -121 7 1195 830 68 17 0 chr15 80037744 80037861 -23457113 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 7 1195 414 101 130 0 chr15 80037861 80037930 -23457044 - B1_Mur4 SINE Alu -3 147 70 7 1195 541 198 0 19 chr15 80037929 80038037 -23456937 + B1_Mur2 SINE Alu 35 140 -9 7 1195 659 184 7 42 chr15 80038038 80038195 -23456779 + B1_Mur1 SINE Alu 1 149 0 7 1195 597 200 7 41 chr15 80039318 80039464 -23455510 + B1_Mur2 SINE Alu 2 142 -7 7 1195 25 0 0 0 chr15 80039515 80039540 -23455434 + AT_rich Low_complexity Low_complexity 1 25 0 7 1195 1151 55 0 0 chr15 80039542 80039687 -23455287 + B1_Mus1 SINE Alu 2 146 -2 8 1195 378 143 0 0 chr15 80039687 80039750 -23455224 + (TA)n Simple_repeat Simple_repeat 2 64 0 8 1195 365 279 25 67 chr15 80039789 80039806 -23455168 - B3A SINE B2 -82 116 103 8 1195 1132 75 0 0 chr15 80039806 80039953 -23455021 + B1_Mus2 SINE Alu 1 147 0 8 1195 443 244 11 4 chr15 80039953 80040054 -23454920 - B3 SINE B2 -96 102 3 8 1195 198 0 0 0 chr15 80040247 80040269 -23454705 + (TTTTA)n Simple_repeat Simple_repeat 5 26 0 8 1195 307 178 0 5 chr15 80040281 80040346 -23454628 - B2_Mm2 SINE B2 -107 109 47 8 1195 1109 113 5 58 chr15 80040378 80040566 -23454408 - B2_Mm1t SINE B2 -14 179 2 8 1195 432 0 0 0 chr15 80040685 80040733 -23454241 + (GA)n Simple_repeat Simple_repeat 1 48 0 8 1195 538 186 7 27 chr15 80040731 80040880 -23454094 + GA-rich Low_complexity Low_complexity 2 147 0 8 1195 1155 48 0 7 chr15 80040880 80041026 -23453948 + B1_Mus2 SINE Alu 1 145 -2 8 1195 400 330 60 32 chr15 80044259 80044444 -23450530 - MLT1J LTR MaLR -271 241 52 9 1195 195 69 0 0 chr15 80044861 80044890 -23450084 + (TCTG)n Simple_repeat Simple_repeat 1 29 0 9 1195 23 33 0 0 chr15 80045792 80045822 -23449152 + AT_rich Low_complexity Low_complexity 1 30 0 9 1195 250 60 38 57 chr15 80046634 80046687 -23448287 + G-rich Low_complexity Low_complexity 3 54 0 9 1195 779 251 11 16 chr15 80047627 80047809 -23447165 + B3A SINE B2 2 182 -16 9 1195 234 91 0 0 chr15 80047810 80047843 -23447131 + (TA)n Simple_repeat Simple_repeat 1 33 0 9 1195 311 200 0 0 chr15 80047851 80047911 -23447063 - B1_Mur2 SINE Alu -4 145 86 9 1195 666 233 108 54 chr15 80048257 80048475 -23446499 + B4A SINE B4 1 230 -62 9 1195 1205 48 24 12 chr15 80048475 80048644 -23446330 + B2_Mm2 SINE B2 2 172 -23 9 1195 258 238 16 16 chr15 80048641 80048705 -23446269 + B4A SINE B4 217 280 -12 9 1195 502 283 14 35 chr15 80048765 80048908 -23446066 + B1F2 SINE Alu 1 140 -9 9 1195 675 271 26 5 chr15 80048919 80049112 -23445862 + B3 SINE B2 1 197 -19 1 1195 709 181 20 40 chr15 80049134 80049284 -23445690 + B1_Mur4 SINE Alu 2 148 -2 1 1195 909 147 28 0 chr15 80049313 80049456 -23445518 + B1_Mus2 SINE Alu 1 147 0 1 1195 243 234 16 0 chr15 80050338 80050402 -23444572 + ID_B1 SINE B4 160 224 0 1 1195 287 309 36 109 chr15 80050429 80050456 -23444518 + B4 SINE B4 70 86 -206 1 1195 625 230 0 45 chr15 80050456 80050588 -23444386 + B1_Mur2 SINE Alu 4 129 -20 1 1195 402 69 0 0 chr15 80050627 80050685 -23444289 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1195 464 200 122 46 chr15 80050718 80050849 -23444125 - B1_Mur4 SINE Alu -7 143 3 1 1195 723 259 109 16 chr15 80050953 80051200 -23443774 + B4A SINE B4 1 270 -22 1 1195 914 94 72 0 chr15 80051225 80051363 -23443611 - B1_Mus1 SINE Alu 0 148 1 1 1195 966 132 0 26 chr15 80051980 80052136 -23442838 + B2_Mm2 SINE B2 14 165 -30 1 1195 312 26 0 0 chr15 80052136 80052154 -23442820 + (T)n Simple_repeat Simple_repeat 1 18 0 1 1195 1232 27 0 0 chr15 80052154 80052301 -23442673 - B1_Mus2 SINE Alu 0 147 1 1 1195 312 26 0 0 chr15 80052301 80052321 -23442653 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1195 978 142 7 0 chr15 80052478 80052626 -23442348 - B1_Mur4 SINE Alu 0 150 2 1 1195 243 164 82 82 chr15 80052955 80053028 -23441946 - RLTR19C LTR ERVK -400 106 34 1 1195 314 273 13 0 chr15 80053243 80053320 -23441654 - ID4_ SINE ID -3 80 3 1 1195 437 226 75 9 chr15 80053361 80053421 -23441553 - PB1D9 SINE Alu 0 120 7 1 1195 210 293 17 0 chr15 80053421 80053468 -23441506 - B4 SINE B4 -154 138 92 1 1195 646 134 0 56 chr15 80053468 80053594 -23441380 - PB1D9 SINE Alu -1 119 1 1 1195 445 215 9 18 chr15 80053604 80053713 -23441261 - PB1D10 SINE Alu -7 110 3 1 1195 1644 166 135 44 chr15 80053779 80054164 -23440810 + MTC LTR MaLR 1 420 -1 1 1195 383 278 10 0 chr15 80054504 80054601 -23440373 + B1F1 SINE Alu 1 98 -51 1 1195 195 129 0 0 chr15 80054602 80054633 -23440341 + (GGAA)n Simple_repeat Simple_repeat 3 33 0 1 1195 679 197 39 22 chr15 80054637 80054817 -23440157 + B3 SINE B2 1 192 -3 1 1195 735 251 19 24 chr15 80054847 80055059 -23439915 + ID_B1 SINE B4 2 212 -12 1 1195 447 337 40 6 chr15 80055070 80055246 -23439728 - MER20 DNA MER1_type -3 216 35 1 1195 387 0 0 0 chr15 80055260 80055303 -23439671 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1195 411 242 11 21 chr15 80055319 80055412 -23439562 + URR1B DNA MER1_type 1 92 -133 1 1195 443 211 17 50 chr15 80055550 80055663 -23439311 + PB1D9 SINE Alu 1 111 -9 1 1195 180 0 0 0 chr15 80055663 80055683 -23439291 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 1195 402 312 0 0 chr15 80055958 80056067 -23438907 + RSINE1 SINE B4 2 110 -55 1 1195 939 128 0 7 chr15 80056143 80056292 -23438682 - B1_Mur4 SINE Alu 0 150 3 1 1195 652 199 161 22 chr15 80056356 80056536 -23438438 - B3 SINE B2 -11 205 1 1 1195 942 122 0 7 chr15 80056678 80056819 -23438155 + B1_Mus2 SINE Alu 1 140 -7 1 1195 363 60 0 0 chr15 80057429 80057479 -23437495 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 1195 242 297 0 86 chr15 80057547 80057628 -23437346 + RLTR25B LTR ERVK 426 499 -529 1 1195 515 189 0 0 chr15 80057574 80057664 -23437310 + B1_Mus2 SINE Alu 46 135 -12 1 1195 225 0 0 0 chr15 80057664 80057689 -23437285 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 1 1195 696 154 0 47 chr15 80058005 80058134 -23436840 + B1_Mur3 SINE Alu 8 130 -19 1 1195 879 274 65 22 chr15 80059180 80059456 -23435518 + B4A SINE B4 1 288 -4 1 1195 1333 70 27 0 chr15 80060492 80060679 -23434295 + B2_Mm1a SINE B2 2 193 0 1 1195 502 282 16 0 chr15 80061109 80061233 -23433741 - ID_B1 SINE B4 -5 219 94 1 1195 252 0 0 0 chr15 80061656 80061684 -23433290 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1195 812 157 15 0 chr15 80061684 80061818 -23433156 - B1_Mur1 SINE Alu -11 138 3 1 1195 330 311 79 86 chr15 80061906 80062184 -23432790 - B4 SINE B4 -16 276 1 1 1195 625 206 185 22 chr15 80062331 80062347 -23432627 - B3 SINE B2 -2 214 199 1 1195 1395 33 66 0 chr15 80062347 80062528 -23432446 - B2_Mm1t SINE B2 0 193 1 1 1195 625 206 185 22 chr15 80062528 80062695 -23432279 - B3 SINE B2 -18 198 1 1 1195 3315 18 8 0 chr15 80063042 80063435 -23431539 + MTA_Mm LTR MaLR 1 396 0 1 1195 211 417 33 0 chr15 80064071 80064191 -23430783 + MIRb SINE MIR 102 225 -43 1 1195 728 201 0 0 chr15 80065316 80065450 -23429524 + B1_Mus2 SINE Alu 13 146 -1 1 1195 295 60 0 39 chr15 80065463 80065515 -23429459 + (GAAA)n Simple_repeat Simple_repeat 2 51 0 1 1195 635 244 91 30 chr15 80065515 80065714 -23429260 + B3 SINE B2 2 212 -4 1 1195 284 302 89 48 chr15 80065852 80065998 -23428976 - MIRc SINE MIR -75 193 42 1 1195 315 0 0 0 chr15 80066139 80066174 -23428800 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1195 225 61 0 0 chr15 80066703 80066736 -23428238 + B1_Mur4 SINE Alu 115 147 -3 1 1195 270 0 0 0 chr15 80066736 80066766 -23428208 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1195 496 262 61 14 chr15 80067274 80067421 -23427553 - RSINE1 SINE B4 -9 156 3 1 1195 780 269 56 0 chr15 80067567 80067764 -23427210 + B3 SINE B2 2 209 -7 1 1195 548 176 0 10 chr15 80068133 80068236 -23426738 - PB1D9 SINE Alu -18 102 1 1 1195 548 176 0 10 chr15 80068297 80068400 -23426574 - PB1D9 SINE Alu -18 102 1 1 1195 290 271 55 27 chr15 80068632 80068742 -23426232 + PB1D10 SINE Alu 5 117 0 1 1195 449 269 46 0 chr15 80069030 80069160 -23425814 + B1F1 SINE Alu 1 136 -13 1 1195 181 268 89 0 chr15 80069434 80069490 -23425484 + MIR SINE MIR 85 145 -117 1 1195 472 267 25 16 chr15 80069490 80069612 -23425362 + ID_B1 SINE B4 78 200 -24 1 1195 305 215 31 0 chr15 80069996 80070061 -23424913 - ID4 SINE ID -16 67 1 1 1195 603 144 24 48 chr15 80070120 80070244 -23424730 - B1_Mur1 SINE Alu -8 141 21 1 1195 349 158 43 129 chr15 80070140 80070256 -23424718 - MT2B2 LTR ERVL -308 276 171 1 1195 295 257 86 136 chr15 80070244 80070282 -23424692 - B4 SINE B4 -74 218 65 1 1195 246 62 0 0 chr15 80073060 80073092 -23421882 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1195 1203 34 0 0 chr15 80073092 80073238 -23421736 - B1_Mm SINE Alu 0 147 2 1 1195 1146 42 0 7 chr15 80074105 80074248 -23420726 + B1_Mus1 SINE Alu 2 143 -5 1 1195 2421 121 63 43 chr15 80074754 80075195 -23419779 - MT2C_Mm LTR ERVL -1 474 25 1 1195 278 213 33 0 chr15 80075182 80075243 -23419731 + MT2B LTR ERVL 154 216 -385 1 1195 6057 126 35 73 chr15 80075256 80075427 -23419547 + ORR1A2-int LTR MaLR 670 872 -920 1 1195 1591 37 0 0 chr15 80075427 80075618 -23419356 + B2_Mm1a SINE B2 2 192 -1 1 1195 6179 96 11 12 chr15 80075618 80076612 -23418362 + ORR1A2-int LTR MaLR 873 1962 -1 1 1195 2222 100 22 0 chr15 80076613 80076933 -23418041 + ORR1A2 LTR MaLR 1 327 0 1 1195 1277 94 16 10 chr15 80077706 80077899 -23417075 + B2_Mm2 SINE B2 2 195 0 1 1195 353 206 59 0 chr15 80078106 80078174 -23416800 + ID4_ SINE ID 5 76 -7 1 1195 556 279 111 34 chr15 80079128 80079336 -23415638 + ID_B1 SINE B4 1 224 0 1 1195 728 187 67 0 chr15 80079521 80079655 -23415319 + RSINE1 SINE B4 2 144 -21 1 1195 258 105 0 0 chr15 80079662 80079700 -23415274 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1195 264 91 0 0 chr15 80080770 80080814 -23414160 + (T)n Simple_repeat Simple_repeat 1 44 0 1 1195 180 0 0 0 chr15 80083062 80083082 -23411892 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1 1195 197 304 46 64 chr15 80084431 80084540 -23410434 - L3 LINE CR1 -4309 180 74 1 1196 21 0 0 0 chr15 80086402 80086423 -23408551 + GC_rich Low_complexity Low_complexity 1 21 0 1 1196 1147 47 0 39 chr15 80090331 80090485 -23404489 + B1_Mus1 SINE Alu 1 148 0 1 1196 378 0 0 0 chr15 80090995 80091037 -23403937 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1196 231 61 0 0 chr15 80091479 80091512 -23403462 + (TTC)n Simple_repeat Simple_repeat 2 34 0 1 1196 1049 53 0 0 chr15 80092059 80092190 -23402784 - B1_Mus2 SINE Alu -15 132 2 1 1196 295 187 133 0 chr15 80092203 80092278 -23402696 + B4A SINE B4 85 169 -123 1 1196 272 91 0 43 chr15 80092480 80092526 -23402448 - B1_Mur4 SINE Alu -106 44 1 1 1196 387 289 74 0 chr15 80092815 80092936 -23402038 + B1F SINE Alu 2 131 -18 1 1196 262 276 153 0 chr15 80093307 80093405 -23401569 + MIRc SINE MIR 121 233 -35 1 1196 643 231 48 43 chr15 80093416 80093624 -23401350 - B3 SINE B2 -6 210 2 1 1196 968 70 0 0 chr15 80093860 80093989 -23400985 + B1_Mus1 SINE Alu 13 141 -7 1 1196 201 39 0 0 chr15 80093992 80094018 -23400956 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1 1196 430 218 69 10 chr15 80094105 80094207 -23400767 - ID_B1 SINE B4 -37 187 80 1 1196 614 245 7 0 chr15 80095043 80095182 -23399792 - ID_B1 SINE B4 -4 220 81 1 1196 258 250 219 57 chr15 80095251 80095268 -23399706 + ID_B1 SINE B4 79 211 -13 1 1196 430 196 36 81 chr15 80095268 80095364 -23399610 + PB1D10 SINE Alu 11 104 -13 1 1196 304 21 0 59 chr15 80095364 80095415 -23399559 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 2 1196 365 314 22 108 chr15 80095584 80095723 -23399251 + B1F1 SINE Alu 2 128 -21 2 1196 1066 86 0 0 chr15 80095914 80096054 -23398920 - B1_Mus1 SINE Alu -8 140 1 2 1196 461 222 231 35 chr15 80096084 80096098 -23398876 - B3 SINE B2 -8 208 198 2 1196 225 0 0 0 chr15 80096098 80096123 -23398851 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1196 461 222 231 35 chr15 80096123 80096281 -23398693 - B3 SINE B2 -19 197 2 2 1196 235 196 0 0 chr15 80096283 80096334 -23398640 + Charlie1b DNA MER1_type 472 522 -1 2 1196 216 273 36 0 chr15 80096368 80096423 -23398551 - ID2 SINE ID -2 81 25 2 1196 187 259 97 65 chr15 80097134 80097196 -23397778 + MIRc SINE MIR 84 147 -121 2 1196 184 240 20 0 chr15 80097499 80097549 -23397425 + MIRc SINE MIR 81 131 -137 2 1196 297 0 0 0 chr15 80097885 80097918 -23397056 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1196 721 222 20 6 chr15 80097942 80098108 -23396866 - ID_B1 SINE B4 -38 254 80 2 1196 1168 55 0 0 chr15 80098131 80098277 -23396697 + B1_Mus2 SINE Alu 2 147 0 2 1196 793 107 68 15 chr15 80098289 80098422 -23396552 - B1_Mur3 SINE Alu 0 149 10 2 1196 593 257 123 40 chr15 80098442 80098693 -23396281 + B4A SINE B4 3 274 -18 2 1196 519 17 0 0 chr15 80098724 80098784 -23396190 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 1196 280 273 102 0 chr15 80098798 80098886 -23396088 + PB1D7 SINE Alu 5 101 -19 2 1196 214 29 57 0 chr15 80099086 80099121 -23395853 + (TCTCTG)n Simple_repeat Simple_repeat 2 38 0 2 1196 1546 205 58 80 chr15 80100285 80100763 -23394211 - RLTR1B LTR ERV1 0 512 2 2 1196 567 255 13 58 chr15 80100917 80101071 -23393903 + B3A SINE B2 30 176 -22 2 1196 639 0 0 0 chr15 80101072 80101143 -23393831 + (CAAAT)n Simple_repeat Simple_repeat 3 73 0 2 1196 515 229 17 0 chr15 80101331 80101449 -23393525 - PB1D7 SINE Alu 0 120 1 2 1196 543 31 0 0 chr15 80101474 80101539 -23393435 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 2 1196 1061 133 0 11 chr15 80101541 80101723 -23393251 + (TCC)n Simple_repeat Simple_repeat 1 180 0 2 1196 723 187 0 18 chr15 80101725 80101894 -23393080 + CT-rich Low_complexity Low_complexity 1 166 0 2 1196 887 174 0 0 chr15 80101894 80102038 -23392936 - B1_Mur4 SINE Alu -6 144 1 2 1196 190 337 55 22 chr15 80102157 80102248 -23392726 + MIR SINE MIR 58 151 -57 2 1196 236 318 12 0 chr15 80102778 80102863 -23392111 + MIRb SINE MIR 99 184 -84 2 1196 351 0 0 0 chr15 80103443 80103482 -23391492 + (GA)n Simple_repeat Simple_repeat 2 40 0 2 1196 756 188 0 45 chr15 80104367 80104523 -23390451 - B1_Mur4 SINE Alu -1 149 1 2 1196 240 224 20 0 chr15 80105335 80105384 -23389590 + CT-rich Low_complexity Low_complexity 1 50 0 2 1196 504 156 232 28 chr15 80105395 80105551 -23389423 - B3 SINE B2 -3 192 10 2 1196 504 48 0 0 chr15 80105561 80105624 -23389350 + (TTTTC)n Simple_repeat Simple_repeat 2 64 0 2 1196 463 229 37 8 chr15 80105624 80105742 -23389232 - B1_Mus2 SINE Alu -11 138 19 2 1196 320 289 37 35 chr15 80105759 80105930 -23389044 + MIR SINE MIR 79 247 -21 2 1196 280 269 118 0 chr15 80106121 80106214 -23388760 + MIRm SINE MIR 43 146 -130 2 1196 221 344 61 0 chr15 80106233 80106364 -23388610 + B4A SINE B4 7 145 -147 2 1196 201 74 0 0 chr15 80106403 80106430 -23388544 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2 1196 778 259 90 20 chr15 80107208 80107409 -23387565 + ID_B1 SINE B4 2 216 -8 2 1196 285 128 0 0 chr15 80107409 80107456 -23387518 + (CAGA)n Simple_repeat Simple_repeat 4 50 0 2 1196 764 258 75 21 chr15 80107792 80108033 -23386941 + MamRep564 Unknown Unknown 72 325 -32 2 1196 189 228 112 12 chr15 80108562 80108642 -23386332 + MIRc SINE MIR 30 117 -151 2 1196 315 0 0 0 chr15 80108793 80108828 -23386146 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1196 237 197 0 0 chr15 80109380 80109446 -23385528 + (TG)n Simple_repeat Simple_repeat 1 66 0 2 1196 302 91 18 0 chr15 80109760 80109815 -23385159 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1196 351 0 0 0 chr15 80110152 80110191 -23384783 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1196 234 275 0 55 chr15 80110314 80110387 -23384587 + ID4_ SINE ID 3 71 -12 2 1196 240 305 54 41 chr15 80110397 80110501 -23384473 + L2a LINE L2 3170 3278 -148 2 1196 882 29 0 0 chr15 80110501 80110606 -23384368 + (TTTC)n Simple_repeat Simple_repeat 4 108 0 2 1196 1256 57 6 44 chr15 80110606 80110789 -23384185 - B2_Mm2 SINE B2 -18 177 2 2 1196 240 305 54 41 chr15 80110789 80110830 -23384144 + L2a LINE L2 3279 3317 -109 2 1196 429 81 0 0 chr15 80110893 80110955 -23384019 + (TCCA)n Simple_repeat Simple_repeat 4 65 0 2 1196 1033 187 39 5 chr15 80111169 80111373 -23383601 + B3 SINE B2 2 212 -4 2 1196 607 267 20 0 chr15 80112412 80112562 -23382412 + ID_B1 SINE B4 72 224 0 2 1196 292 336 80 7 chr15 80112975 80113093 -23381881 + MIRb SINE MIR 55 183 -85 2 1196 441 54 0 0 chr15 80113093 80113149 -23381825 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1196 292 336 80 7 chr15 80113149 80113168 -23381806 + MIRb SINE MIR 184 202 -66 2 1196 302 67 22 0 chr15 80113655 80113700 -23381274 + (TCCC)n Simple_repeat Simple_repeat 3 48 0 2 1196 663 208 48 7 chr15 80114137 80114282 -23380692 - RSINE1 SINE B4 -8 157 7 2 1196 285 359 68 37 chr15 80114348 80114510 -23380464 + MIR SINE MIR 85 251 -11 2 1196 327 25 0 0 chr15 80114687 80114727 -23380247 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1196 1315 87 5 26 chr15 80115958 80116147 -23378827 - B2_Mm2 SINE B2 -7 188 4 2 1196 419 0 20 0 chr15 80116147 80116198 -23378776 + (TTTTG)n Simple_repeat Simple_repeat 2 53 0 2 1196 1304 207 196 11 chr15 80116269 80116616 -23378358 + MTD LTR MaLR 9 419 0 2 1196 370 202 176 48 chr15 80117104 80117229 -23377745 - B1_Mur1 SINE Alu 0 149 9 2 1196 308 256 121 50 chr15 80117229 80117244 -23377730 - ID_B1 SINE B4 0 224 75 2 1196 326 228 0 66 chr15 80117885 80118068 -23376906 + C-rich Low_complexity Low_complexity 3 173 0 2 1196 192 77 0 0 chr15 80118299 80118325 -23376649 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2 1196 342 156 0 0 chr15 80119134 80119198 -23375776 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 1196 405 39 0 0 chr15 80119209 80119260 -23375714 + (GA)n Simple_repeat Simple_repeat 1 51 0 2 1196 267 31 0 0 chr15 80120513 80120545 -23374429 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1196 264 231 0 30 chr15 80120596 80120663 -23374311 + CT-rich Low_complexity Low_complexity 2 66 0 2 1196 259 203 17 17 chr15 80120902 80120962 -23374012 - L2b LINE L2 -19 3356 3297 2 1196 188 319 139 17 chr15 80121486 80121601 -23373373 + MIRb SINE MIR 100 228 -40 2 1196 182 358 12 0 chr15 80122052 80122133 -23372841 + MIR SINE MIR 60 141 -67 2 1196 360 298 39 13 chr15 80122630 80122783 -23372191 + L3 LINE CR1 4070 4226 -263 2 1196 876 148 0 0 chr15 80122957 80123085 -23371889 - B1_Mus2 SINE Alu -17 130 3 2 1196 215 297 25 8 chr15 80123086 80123205 -23371769 + (TG)n Simple_repeat Simple_repeat 1 121 0 2 1196 268 387 23 61 chr15 80124286 80124418 -23370556 + MIRb SINE MIR 34 160 -108 2 1196 583 236 12 48 chr15 80124456 80124621 -23370353 - HAL1-2a_MD LINE L1 -522 2502 2344 2 1196 192 341 129 0 chr15 80125790 80125922 -23369052 + L2b LINE L2 2727 2875 -544 2 1196 270 338 56 68 chr15 80125949 80126245 -23368729 + L2b LINE L2 2958 3259 -167 2 1196 521 296 34 67 chr15 80126203 80126442 -23368532 - L2a LINE L2 0 3426 3196 2 1196 314 245 209 68 chr15 80127333 80127490 -23367484 + MIR3 SINE MIR 4 179 -29 2 1196 198 0 0 0 chr15 80127493 80127515 -23367459 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 1196 673 274 8 10 chr15 80127699 80127894 -23367080 - B3A SINE B2 -1 215 27 2 1196 248 281 67 0 chr15 80128031 80128120 -23366854 - B4A SINE B4 -196 96 2 2 1196 522 0 0 0 chr15 80128160 80128218 -23366756 + (TTTTA)n Simple_repeat Simple_repeat 5 62 0 2 1196 637 271 79 15 chr15 80128219 80128421 -23366553 - ID_B1 SINE B4 -7 217 3 2 1196 24 0 0 0 chr15 80128430 80128454 -23366520 + AT_rich Low_complexity Low_complexity 1 24 0 2 1196 247 330 50 10 chr15 80129359 80129460 -23365514 - MLT1A1 LTR MaLR -294 114 10 2 1196 33 0 0 0 chr15 80129623 80129656 -23365318 + AT_rich Low_complexity Low_complexity 1 33 0 2 1196 387 128 20 0 chr15 80129662 80129734 -23365240 - B2_Mm2 SINE B2 -75 123 46 2 1196 1265 114 11 0 chr15 80129749 80129925 -23365049 - B2_Mm2 SINE B2 -17 178 1 2 1196 264 269 9 80 chr15 80129928 80130041 -23364933 + L2b LINE L2 3066 3170 -205 2 1196 324 0 0 0 chr15 80130042 80130078 -23364896 + (TTA)n Simple_repeat Simple_repeat 2 37 0 2 1196 383 204 136 0 chr15 80130080 80130168 -23364806 - ID_B1 SINE B4 -12 212 113 2 1196 1097 97 0 17 chr15 80130714 80130893 -23364081 + (TTCTCC)n Simple_repeat Simple_repeat 5 180 0 2 1196 881 188 0 0 chr15 80130927 80131065 -23363909 - B1_Mur2 SINE Alu -7 142 5 2 1196 717 45 0 0 chr15 80131257 80131346 -23363628 + (TCCC)n Simple_repeat Simple_repeat 4 92 0 2 1196 210 37 0 0 chr15 80131361 80131388 -23363586 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 2 1196 1105 104 0 0 chr15 80131389 80131543 -23363431 - B2_Mm2 SINE B2 -41 154 1 2 1196 435 227 88 26 chr15 80131547 80131660 -23363314 - PB1D9 SINE Alu 0 120 1 2 1196 232 217 0 0 chr15 80131749 80131795 -23363179 + MIR SINE MIR 81 126 -82 2 1196 235 269 45 0 chr15 80132263 80132330 -23362644 + B3A SINE B2 3 72 -126 3 1196 545 134 34 43 chr15 80132345 80132462 -23362512 + MTD LTR MaLR 5 120 -299 3 1196 243 250 13 77 chr15 80132462 80132512 -23362462 + polypyrimidine Low_complexity Low_complexity 25 75 0 3 1196 893 167 21 0 chr15 80132512 80132656 -23362318 - B1_Mus2 SINE Alu 0 147 1 3 1196 243 250 13 77 chr15 80132656 80132683 -23362291 + polypyrimidine Low_complexity Low_complexity 3 24 0 3 1196 1252 48 0 0 chr15 80132685 80132832 -23362142 - B1_Mus2 SINE Alu 0 147 1 3 1196 480 194 11 0 chr15 80132832 80132925 -23362049 + MTD LTR MaLR 110 203 -216 3 1196 371 396 3 11 chr15 80132925 80133222 -23361752 + CT-rich Low_complexity Low_complexity 1 294 0 3 1196 496 296 16 44 chr15 80135157 80135373 -23359601 - MIRb SINE MIR -23 245 30 3 1196 264 30 0 0 chr15 80136485 80136518 -23358456 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1196 22 35 0 0 chr15 80136607 80136636 -23358338 + AT_rich Low_complexity Low_complexity 1 29 0 3 1196 222 250 32 32 chr15 80138259 80138321 -23356653 + MIRm SINE MIR 92 153 -123 3 1196 271 118 118 0 chr15 80138331 80138382 -23356592 + MER20 DNA MER1_type 6 62 -157 3 1196 1149 173 3 8 chr15 80138687 80139043 -23355931 + (TCCA)n Simple_repeat Simple_repeat 1 354 0 3 1196 211 296 15 0 chr15 80139082 80139217 -23355757 + (TCCA)n Simple_repeat Simple_repeat 1 137 0 3 1196 263 283 94 34 chr15 80140328 80140445 -23354529 + Charlie4a DNA MER1_type 29 152 -356 3 1196 288 247 91 0 chr15 80140678 80140755 -23354219 + PB1D7 SINE Alu 6 89 -31 3 1196 260 57 0 0 chr15 80140757 80140792 -23354182 - MurSatRep1 Unknown Unknown -1873 264 230 3 1196 254 0 0 159 chr15 80140794 80140920 -23354054 + (CAGAG)n Simple_repeat Simple_repeat 5 110 0 3 1196 537 204 0 44 chr15 80140923 80141036 -23353938 + B1_Mur2 SINE Alu 42 149 0 3 1196 977 157 14 0 chr15 80141225 80141372 -23353602 + B1_Mur3 SINE Alu 1 149 0 3 1196 664 280 13 13 chr15 80141442 80141601 -23353373 + RSINE1 SINE B4 3 161 -4 3 1196 359 44 0 0 chr15 80141725 80141770 -23353204 - HAL1-3A_ME LINE L1 -839 2019 1975 3 1196 829 148 22 21 chr15 80141773 80142241 -23352733 + (TATG)n Simple_repeat Simple_repeat 1 468 0 3 1196 475 246 263 0 chr15 80143545 80143720 -23351254 - ID_B1 SINE B4 -3 221 1 3 1196 1059 209 48 0 chr15 80143738 80143944 -23351030 - B3 SINE B2 0 216 1 3 1196 894 184 0 0 chr15 80144009 80144183 -23350791 + CT-rich Low_complexity Low_complexity 4 177 0 3 1196 348 243 0 0 chr15 80144191 80144265 -23350709 - PB1D10 SINE Alu -43 74 1 3 1196 270 320 116 0 chr15 80144436 80144583 -23350391 - L1ME3 LINE L1 -216 5946 5783 3 1196 264 256 12 37 chr15 80144593 80144674 -23350300 - MER20 DNA MER1_type -6 213 135 3 1196 228 143 0 0 chr15 80144766 80144808 -23350166 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 3 1196 201 146 0 0 chr15 80144999 80145047 -23349927 + (G)n Simple_repeat Simple_repeat 1 48 0 3 1196 360 0 0 0 chr15 80145454 80145494 -23349480 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1196 304 223 142 28 chr15 80145930 80146036 -23348938 - PB1D7 SINE Alu -1 119 2 3 1196 1235 61 0 6 chr15 80146994 80147159 -23347815 - B2_Mm2 SINE B2 -31 164 1 3 1196 222 264 41 166 chr15 80148170 80148221 -23346753 - B1F SINE Alu -22 127 84 3 1196 560 136 220 0 chr15 80148221 80148339 -23346635 - B1_Mus1 SINE Alu 0 148 5 3 1196 222 264 41 166 chr15 80148339 80148432 -23346542 - B1F SINE Alu -66 83 1 3 1196 350 180 9 152 chr15 80148342 80148447 -23346527 - ID_B1 SINE B4 -68 156 67 3 1196 413 192 73 92 chr15 80148499 80148608 -23346366 - PB1D10 SINE Alu -2 115 9 3 1196 254 272 59 47 chr15 80148561 80148646 -23346328 - B4 SINE B4 -152 140 55 3 1196 198 71 0 0 chr15 80150661 80150689 -23344285 + (TGGGGG)n Simple_repeat Simple_repeat 3 30 0 3 1196 411 310 70 0 chr15 80151236 80151378 -23343596 + MIRm SINE MIR 37 188 -88 3 1196 192 273 90 13 chr15 80151443 80151521 -23343453 + MIRm SINE MIR 87 170 -106 3 1196 292 315 22 0 chr15 80151968 80152057 -23342917 + MIRc SINE MIR 77 167 -101 3 1196 436 366 6 0 chr15 80152115 80152279 -23342695 + (CAT)n Simple_repeat Simple_repeat 1 165 0 3 1196 216 200 0 0 chr15 80152282 80152332 -23342642 + (CACCAT)n Simple_repeat Simple_repeat 1 50 0 3 1196 485 261 50 38 chr15 80152362 80152521 -23342453 + HAL1-2a_MD LINE L1 2346 2506 -518 3 1196 238 280 40 0 chr15 80152599 80152674 -23342300 + PB1 SINE Alu 50 127 0 3 1196 446 33 17 0 chr15 80153868 80153928 -23341046 + (TC)n Simple_repeat Simple_repeat 1 61 0 3 1196 245 259 0 0 chr15 80154059 80154117 -23340857 - HAL1 LINE L1 -1483 1024 967 3 1196 340 364 14 20 chr15 80154421 80154567 -23340407 - LTR37B LTR ERV1 -249 219 75 3 1196 323 234 25 45 chr15 80154551 80154671 -23340303 - PB1D9 SINE Alu -1 119 2 3 1196 524 316 127 0 chr15 80155342 80155579 -23339395 - L3 LINE CR1 -8 4481 4215 3 1196 245 339 47 29 chr15 80155563 80155733 -23339241 - L2a LINE L2 -1 3425 3253 3 1196 261 0 0 0 chr15 80157592 80157621 -23337353 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1196 556 339 31 52 chr15 80159299 80159588 -23335386 + B4A SINE B4 9 291 -1 3 1196 236 232 18 18 chr15 80160099 80160156 -23334818 - MLT1A0 LTR MaLR -50 315 259 3 1196 180 264 175 62 chr15 80161209 80161306 -23333668 - MIRb SINE MIR -155 113 6 3 1196 285 29 0 0 chr15 80161519 80161553 -23333421 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1196 224 242 15 61 chr15 80162568 80162634 -23332340 - ID4 SINE ID -13 70 8 3 1196 245 369 75 8 chr15 80163020 80163285 -23331689 - L2 LINE L2 -484 2935 2653 3 1196 213 274 26 40 chr15 80163725 80163801 -23331173 + L4 LINE RTE 1764 1838 -191 3 1196 399 41 0 0 chr15 80165243 80165292 -23329682 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1196 387 0 0 0 chr15 80165605 80165648 -23329326 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1196 222 245 0 36 chr15 80166002 80166057 -23328917 - L2c LINE L2 -203 3184 3132 3 1196 207 304 0 0 chr15 80167583 80167639 -23327335 + (CCCA)n Simple_repeat Simple_repeat 2 57 0 3 1196 374 323 134 50 chr15 80167804 80168087 -23326887 - RLTR12B LTR ERVK -220 308 2 3 1196 259 283 8 8 chr15 80168154 80168282 -23326692 + (TCTA)n Simple_repeat Simple_repeat 2 129 0 3 1196 292 297 11 11 chr15 80168286 80168378 -23326596 + (CCTA)n Simple_repeat Simple_repeat 2 93 0 3 1196 761 295 45 48 chr15 80168702 80168994 -23325980 - B4A SINE B4 0 292 2 3 1196 211 312 21 10 chr15 80169891 80169988 -23324986 + (TATATG)n Simple_repeat Simple_repeat 6 103 0 3 1196 772 164 17 11 chr15 80170437 80170616 -23324358 + CT-rich Low_complexity Low_complexity 1 180 0 3 1196 399 182 354 0 chr15 80170649 80170748 -23324226 - B1_Mus1 SINE Alu -14 134 1 3 1196 216 367 111 28 chr15 80171836 80172052 -23322922 + MIRb SINE MIR 29 262 -6 3 1196 213 205 0 0 chr15 80172913 80172952 -23322022 + GA-rich Low_complexity Low_complexity 5 43 0 3 1196 28 48 0 0 chr15 80174959 80175001 -23319973 + AT_rich Low_complexity Low_complexity 1 42 0 3 1196 1176 93 37 27 chr15 80175001 80175188 -23319786 - B2_Mm2 SINE B2 -1 194 6 3 1196 409 319 0 9 chr15 80175188 80175302 -23319672 - PB1D7 SINE Alu -6 114 2 3 1196 1186 201 9 9 chr15 80175429 80175645 -23319329 - B3 SINE B2 0 216 1 3 1196 201 196 0 0 chr15 80176080 80176126 -23318848 + GA-rich Low_complexity Low_complexity 2 47 0 3 1196 205 250 296 0 chr15 80176175 80176263 -23318711 - MIR SINE MIR -70 138 25 3 1196 240 287 19 29 chr15 80176570 80176674 -23318300 + (TCTCTG)n Simple_repeat Simple_repeat 2 104 0 3 1196 350 356 17 22 chr15 80178031 80178213 -23316761 - L2b LINE L2 -2 3373 3217 3 1196 200 160 19 39 chr15 80178967 80178991 -23315983 + C-rich Low_complexity Low_complexity 31 53 0 3 1196 2052 147 55 57 chr15 80178991 80179410 -23315564 - MTC LTR MaLR -2 419 2 3 1196 200 160 19 39 chr15 80179410 80179437 -23315537 + C-rich Low_complexity Low_complexity 3 30 0 3 1196 303 104 0 0 chr15 80180623 80180671 -23314303 + (TGAA)n Simple_repeat Simple_repeat 4 51 0 3 1196 230 270 187 3 chr15 80181807 80181929 -23313045 + MIR SINE MIR 26 169 -39 3 1196 1154 255 18 42 chr15 80182238 80182521 -23312453 - B4A SINE B4 0 292 17 3 1196 210 262 0 176 chr15 80182416 80182541 -23312433 - B3 SINE B2 -101 115 13 3 1196 1159 50 43 0 chr15 80183405 80183546 -23311428 + B1_Mm SINE Alu 1 147 0 3 1196 369 250 12 12 chr15 80183578 80183659 -23311315 + ID4 SINE ID 1 81 -2 3 1196 354 277 57 25 chr15 80183954 80184076 -23310898 + L1MC3 LINE L1 6521 6646 -1139 3 1196 327 49 0 0 chr15 80184078 80184119 -23310855 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1196 225 0 0 0 chr15 80184575 80184600 -23310374 + (TTTTTG)n Simple_repeat Simple_repeat 6 30 0 3 1196 630 210 8 0 chr15 80184600 80184719 -23310255 - B1_Mus1 SINE Alu 0 148 29 3 1196 21 0 0 0 chr15 80184744 80184765 -23310209 + AT_rich Low_complexity Low_complexity 1 21 0 3 1196 547 277 31 0 chr15 80184798 80184928 -23310046 + ID_B1 SINE B4 85 218 -6 3 1196 330 261 152 0 chr15 80184958 80185050 -23309924 - B1F SINE Alu -13 136 31 3 1196 1317 27 0 0 chr15 80185213 80185360 -23309614 - B1_Mm SINE Alu 0 147 1 3 1196 399 41 0 0 chr15 80186783 80186832 -23308142 + (GGA)n Simple_repeat Simple_repeat 3 51 0 3 1196 257 277 74 11 chr15 80188018 80188113 -23306861 - MIR3 SINE MIR -26 182 82 3 1196 312 349 12 23 chr15 80188835 80189008 -23305966 + CT-rich Low_complexity Low_complexity 3 173 0 4 1196 316 345 0 45 chr15 80189024 80189203 -23305771 + CT-rich Low_complexity Low_complexity 1 171 0 4 1196 632 259 151 0 chr15 80190081 80190266 -23304708 + ID_B1 SINE B4 2 214 -10 4 1196 925 108 30 0 chr15 80190267 80190434 -23304540 + (GA)n Simple_repeat Simple_repeat 1 172 0 4 1196 188 269 23 103 chr15 80190458 80190545 -23304429 - MIR SINE MIR -86 176 97 4 1196 794 83 49 8 chr15 80191368 80191490 -23303484 + B1_Mus1 SINE Alu 1 127 -21 4 1196 549 150 0 0 chr15 80191533 80191633 -23303341 + (GGA)n Simple_repeat Simple_repeat 3 102 0 4 1196 854 169 6 0 chr15 80191643 80191809 -23303165 + GA-rich Low_complexity Low_complexity 3 169 0 4 1196 366 286 35 76 chr15 80193671 80193815 -23301159 + MER63A DNA AcHobo 26 163 -47 4 1196 878 196 7 0 chr15 80194034 80194177 -23300797 + B1_Mus2 SINE Alu 2 145 -2 4 1196 182 370 61 30 chr15 80194197 80194328 -23300646 - L2a LINE L2 0 3426 3292 4 1196 241 314 47 0 chr15 80194552 80194638 -23300336 + MIRb SINE MIR 52 141 -127 4 1196 247 264 95 12 chr15 80195350 80195458 -23299516 + ZP3AR Satellite Satellite 1 116 -67 4 1196 269 236 138 0 chr15 80195411 80195487 -23299487 + BC1_Mm scRNA scRNA 2 87 -65 4 1196 203 389 23 16 chr15 80195598 80195726 -23299248 - MIRc SINE MIR -75 193 65 4 1196 1024 241 28 9 chr15 80196975 80197189 -23297785 - ID_B1 SINE B4 -2 222 5 4 1196 211 194 0 0 chr15 80198204 80198240 -23296734 + (TGAG)n Simple_repeat Simple_repeat 2 37 0 4 1196 321 305 109 0 chr15 80199317 80199445 -23295529 - Charlie4a DNA MER1_type -107 401 260 4 1196 406 331 47 0 chr15 80199456 80199604 -23295370 - Charlie4a DNA MER1_type -277 231 77 4 1196 649 216 49 28 chr15 80199652 80199795 -23295179 - RSINE1 SINE B4 -15 150 5 4 1196 279 0 0 0 chr15 80201396 80201427 -23293547 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 1196 293 296 108 27 chr15 80202344 80202455 -23292519 + MIRb SINE MIR 27 146 -122 4 1196 591 15 0 0 chr15 80203501 80203569 -23291405 + (GGA)n Simple_repeat Simple_repeat 1 68 0 4 1196 798 67 0 0 chr15 80204275 80204380 -23290594 + (GA)n Simple_repeat Simple_repeat 2 106 0 4 1196 645 147 0 0 chr15 80206417 80206526 -23288448 + (TTCC)n Simple_repeat Simple_repeat 3 111 0 4 1196 188 262 0 0 chr15 80206539 80206581 -23288393 + MIRc SINE MIR 111 152 -116 4 1196 303 255 13 7 chr15 80207590 80207740 -23287234 + (TGGA)n Simple_repeat Simple_repeat 1 151 0 4 1196 930 86 20 0 chr15 80207758 80207909 -23287065 + (TAGA)n Simple_repeat Simple_repeat 2 155 0 4 1196 206 234 36 9 chr15 80207940 80208052 -23286922 + (TGGA)n Simple_repeat Simple_repeat 4 118 0 4 1196 675 221 0 0 chr15 80208074 80208232 -23286742 + (TGGA)n Simple_repeat Simple_repeat 1 158 0 4 1196 282 349 45 65 chr15 80210368 80210567 -23284407 - MIR SINE MIR -67 195 1 4 1196 270 0 0 0 chr15 80210663 80210693 -23284281 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 4 1196 239 192 0 0 chr15 80210704 80210756 -23284218 + L1M6 LINE L1 2396 2447 -4049 4 1196 210 325 47 4 chr15 80211149 80211258 -23283716 - MIRm SINE MIR -130 146 21 4 1196 688 111 9 9 chr15 80212136 80212245 -23282729 - B2_Mm2 SINE B2 -86 109 1 4 1196 243 0 0 0 chr15 80213360 80213387 -23281587 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1196 949 248 19 39 chr15 80213418 80213674 -23281300 - RLTR14 LTR ERV1 -131 251 1 4 1196 666 289 18 22 chr15 80213824 80214047 -23280927 - RLTR14-int LTR ERV1 -151 5166 4945 4 1196 275 300 21 7 chr15 80215009 80215153 -23279821 - MuLV-int LTR ERV1 -2719 5059 4885 4 1196 296 302 86 39 chr15 80215504 80215873 -23279101 - RLTR14-int LTR ERV1 -3231 4370 4226 4 1197 510 318 173 24 chr15 80217584 80217832 -23277142 - B4A SINE B4 -7 285 1 4 1197 246 269 0 0 chr15 80219696 80219763 -23275211 + (CCCCAG)n Simple_repeat Simple_repeat 6 72 0 4 1197 293 337 17 40 chr15 80221814 80221987 -23272987 - L2b LINE L2 -175 3200 3032 4 1197 182 294 14 42 chr15 80223357 80223428 -23271546 - MIRb SINE MIR -6 262 194 4 1197 1381 181 24 4 chr15 80223442 80223697 -23271277 - MTEa LTR MaLR 0 379 120 4 1197 508 244 46 0 chr15 80223697 80223828 -23271146 - MTEa LTR MaLR -221 158 22 4 1197 183 28 83 0 chr15 80224970 80225006 -23269968 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1197 220 220 0 0 chr15 80226308 80226358 -23268616 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 1197 209 263 35 0 chr15 80227590 80227647 -23267327 - MIRc SINE MIR -91 177 119 4 1197 2098 155 31 0 chr15 80229061 80229416 -23265558 - ORR1C1 LTR MaLR -2 376 11 4 1197 497 241 13 81 chr15 80229412 80229561 -23265413 + B3A SINE B2 60 198 0 4 1197 271 327 39 32 chr15 80229597 80229752 -23265222 - MLT1K LTR MaLR -57 538 383 4 1197 219 45 43 22 chr15 80230136 80230182 -23264792 + (TTTTG)n Simple_repeat Simple_repeat 1 47 0 4 1197 273 119 0 0 chr15 80231558 80231600 -23263374 + (TGGA)n Simple_repeat Simple_repeat 3 44 0 4 1197 202 274 16 0 chr15 80231896 80231958 -23263016 + (TCTCTG)n Simple_repeat Simple_repeat 6 68 0 4 1197 321 219 14 14 chr15 80232863 80232937 -23262037 - L2a LINE L2 -1 3425 3352 4 1197 284 239 15 0 chr15 80233205 80233272 -23261702 + ID4 SINE ID 1 68 -15 4 1197 698 274 6 6 chr15 80233881 80234046 -23260928 + ID_B1 SINE B4 60 224 0 4 1197 240 271 92 46 chr15 80234064 80234238 -23260736 - L1MB3 LINE L1 -2 6178 5997 4 1197 268 248 257 4 chr15 80234247 80234440 -23260534 - RMER15 LTR ERVL 0 575 305 4 1197 2097 121 62 100 chr15 80234596 80235066 -23259908 - RMER4A LTR ERVK 0 466 15 4 1197 257 214 86 43 chr15 80235087 80235161 -23259813 - L1MB3 LINE L1 -193 5990 5911 4 1197 1553 91 223 71 chr15 80235161 80235444 -23259530 - ORR1A3 LTR MaLR 0 326 1 4 1197 257 214 86 43 chr15 80235444 80235462 -23259512 - L1MB3 LINE L1 -273 5910 5894 4 1197 274 378 21 7 chr15 80235534 80235678 -23259296 - L1MB3 LINE L1 -425 5758 5613 4 1197 2264 123 45 35 chr15 80237054 80237451 -23257523 - MTC LTR MaLR 0 421 21 4 1197 890 234 62 0 chr15 80237492 80237684 -23257290 - ID_B1 SINE B4 -19 205 2 4 1197 325 147 24 57 chr15 80238090 80238213 -23256761 + CT-rich Low_complexity Low_complexity 1 119 0 4 1197 373 312 97 0 chr15 80240086 80240230 -23254744 - MLT1A LTR MaLR -216 158 1 4 1197 595 298 21 30 chr15 80240327 80240660 -23254314 + ORR1E LTR MaLR 2 366 -13 4 1197 267 277 48 0 chr15 80241023 80241106 -23253868 - MLT2C1 LTR ERVL -296 101 15 4 1197 243 189 20 19 chr15 80242109 80242173 -23252801 - MLT1J1 LTR MaLR -344 104 44 4 1197 495 0 0 0 chr15 80242360 80242415 -23252559 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 1197 212 265 0 20 chr15 80242415 80242465 -23252509 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 1197 444 174 0 0 chr15 80242513 80242605 -23252369 + CT-rich Low_complexity Low_complexity 2 93 0 4 1197 895 282 12 28 chr15 80242613 80242632 -23252342 - B4A SINE B4 -44 248 229 4 1197 433 273 27 18 chr15 80242632 80242744 -23252230 - PB1D9 SINE Alu -5 115 3 4 1197 895 282 12 28 chr15 80242744 80242976 -23251998 - B4A SINE B4 -64 228 1 4 1197 243 296 24 24 chr15 80243055 80243138 -23251836 + (CATATA)n Simple_repeat Simple_repeat 5 87 0 4 1197 324 302 0 0 chr15 80243140 80243289 -23251685 + (CA)n Simple_repeat Simple_repeat 2 150 0 4 1197 267 31 0 0 chr15 80245950 80245982 -23248992 + (ATG)n Simple_repeat Simple_repeat 2 33 0 4 1197 303 28 0 0 chr15 80246662 80246698 -23248276 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1197 249 300 0 41 chr15 80246707 80246780 -23248194 - B4A SINE B4 -2 290 221 4 1197 252 0 0 0 chr15 80246781 80246809 -23248165 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1197 581 296 82 26 chr15 80246809 80247076 -23247898 - B4A SINE B4 0 292 11 4 1197 545 0 15 0 chr15 80247242 80247307 -23247667 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 1197 22 0 0 0 chr15 80247834 80247856 -23247118 + GC_rich Low_complexity Low_complexity 1 22 0 4 1197 476 319 63 16 chr15 80248042 80248233 -23246741 - ID_B1 SINE B4 -16 208 9 4 1197 216 204 74 0 chr15 80249149 80249203 -23245771 - B1F2 SINE Alu -91 58 1 4 1197 2547 63 25 0 chr15 80249272 80249591 -23245383 + ORR1A2 LTR MaLR 1 327 0 4 1197 237 65 0 0 chr15 80250374 80250405 -23244569 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 4 1197 190 115 82 0 chr15 80250815 80250876 -23244098 + GA-rich Low_complexity Low_complexity 1 66 0 4 1197 413 209 28 39 chr15 80250902 80251081 -23243893 + GA-rich Low_complexity Low_complexity 2 178 0 4 1197 29 47 0 0 chr15 80251727 80251770 -23243204 + AT_rich Low_complexity Low_complexity 1 43 0 4 1197 676 260 90 25 chr15 80251781 80251982 -23242992 - B3 SINE B2 -2 214 1 4 1197 444 302 165 11 chr15 80253474 80253735 -23241239 + RMER5 LTR ERV1 223 523 -11 4 1197 248 296 0 102 chr15 80254467 80254481 -23240493 - MER63B DNA AcHobo 0 436 423 4 1197 1277 268 111 11 chr15 80254481 80254858 -23240116 - MTD LTR MaLR 0 419 5 4 1197 248 296 0 102 chr15 80254858 80254971 -23240003 - MER63B DNA AcHobo -14 422 322 4 1197 393 75 0 0 chr15 80254975 80255028 -23239946 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1197 409 169 258 0 chr15 80257917 80258006 -23236968 + B3 SINE B2 2 113 -103 4 1197 264 30 0 0 chr15 80258045 80258078 -23236896 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 4 1197 870 149 7 13 chr15 80258253 80258388 -23236586 + B1_Mur2 SINE Alu 1 136 -13 4 1197 387 56 0 0 chr15 80258388 80258442 -23236532 + (CAAAC)n Simple_repeat Simple_repeat 1 54 0 4 1197 870 149 7 13 chr15 80258442 80258456 -23236518 + B1_Mur2 SINE Alu 137 149 0 4 1197 405 58 0 0 chr15 80258471 80258523 -23236451 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 4 1197 799 260 10 30 chr15 80258526 80258728 -23236246 + B4 SINE B4 84 281 -11 4 1197 241 185 0 18 chr15 80258752 80258807 -23236167 + L1MB3 LINE L1 6130 6183 0 4 1197 272 250 0 0 chr15 80260056 80260112 -23234862 - B3A SINE B2 -135 63 8 4 1197 227 337 28 37 chr15 80260124 80260232 -23234742 - MLT1I LTR MaLR -300 111 5 4 1197 506 271 45 13 chr15 80260375 80260532 -23234442 + B4 SINE B4 8 169 -123 4 1197 235 232 0 18 chr15 80260590 80260647 -23234327 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 1197 1302 36 0 6 chr15 80261891 80262058 -23232916 - B2_Mm2 SINE B2 -27 168 3 4 1197 249 172 0 0 chr15 80262510 80262574 -23232400 + C-rich Low_complexity Low_complexity 1 64 0 5 1197 976 216 26 0 chr15 80262648 80262838 -23232136 + ID_B1 SINE B4 1 195 -29 5 1197 500 233 0 0 chr15 80262851 80262954 -23232020 - B3 SINE B2 -76 140 38 5 1197 312 241 12 37 chr15 80264015 80264097 -23230877 - ORR1E LTR MaLR -5 354 275 5 1197 324 311 216 0 chr15 80264289 80264467 -23230507 + Tigger7 DNA MER2_type 2252 2470 -21 5 1197 385 330 103 74 chr15 80264467 80264847 -23230127 + MLT1C LTR MaLR 1 391 -76 5 1197 1524 47 0 59 chr15 80265322 80265525 -23229449 + B2_Mm1t SINE B2 1 191 -2 5 1197 579 287 0 20 chr15 80265539 80265685 -23229289 + B1F1 SINE Alu 3 145 -4 5 1197 207 0 0 0 chr15 80266264 80266287 -23228687 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 1197 321 219 60 95 chr15 80266469 80266585 -23228389 - ORR1E LTR MaLR -247 112 1 5 1197 192 77 0 0 chr15 80266933 80266959 -23228015 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 1197 934 223 30 0 chr15 80266993 80267195 -23227779 - B3 SINE B2 -8 208 1 5 1197 236 289 242 0 chr15 80267316 80267444 -23227530 - LTR48 LTR ERV1 -628 159 1 5 1197 377 256 12 0 chr15 80267476 80267562 -23227412 + MLT1A0 LTR MaLR 279 365 0 5 1197 290 339 0 2 chr15 80270749 80270858 -23224116 + MIR SINE MIR 53 166 -110 5 1197 368 164 27 0 chr15 80270881 80270954 -23224020 + B4A SINE B4 1 75 -217 5 1197 1857 137 142 12 chr15 80270960 80271285 -23223689 + ORR1B2 LTR MaLR 1 367 0 5 1197 270 0 0 0 chr15 80271294 80271324 -23223650 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 1197 497 325 95 40 chr15 80271411 80271741 -23223233 - ORR1E LTR MaLR -2 377 6 5 1197 186 313 139 20 chr15 80272077 80272146 -23222828 + L2c LINE L2 3266 3347 -40 5 1197 905 227 160 19 chr15 80272146 80272402 -23222572 - B4A SINE B4 0 292 1 5 1197 186 313 139 20 chr15 80272402 80272433 -23222541 + L2c LINE L2 3348 3377 -10 5 1197 288 354 10 0 chr15 80272514 80272610 -23222364 - B1F SINE Alu -51 98 2 5 1197 2459 263 67 21 chr15 80273615 80274329 -23220645 + Lx8 LINE L1 6476 7222 -251 5 1197 733 254 20 30 chr15 80274330 80274533 -23220441 - ORR1D2 LTR MaLR 0 370 170 5 1197 207 0 0 0 chr15 80274535 80274558 -23220416 + (CATA)n Simple_repeat Simple_repeat 2 24 0 5 1197 1163 130 3 3 chr15 80274560 80275214 -23219760 + (TAGA)n Simple_repeat Simple_repeat 1 654 0 5 1197 660 263 44 3 chr15 80275221 80275415 -23219559 - ORR1D2 LTR MaLR -181 193 1 5 1197 332 245 65 47 chr15 80275715 80275822 -23219152 + B4 SINE B4 184 292 0 5 1197 182 306 112 0 chr15 80276883 80276981 -23217993 + L2a LINE L2 3312 3420 -6 5 1197 879 240 24 14 chr15 80277466 80277677 -23217297 - B3 SINE B2 0 216 4 5 1197 526 229 67 30 chr15 80278149 80278284 -23216690 - B1F2 SINE Alu -9 140 1 5 1197 2051 137 29 3 chr15 80278298 80278614 -23216360 - RMER19B LTR ERVK 0 902 579 5 1197 2155 161 37 127 chr15 80278606 80279117 -23215857 - RMER19B LTR ERVK -436 466 2 5 1197 363 326 93 21 chr15 80279351 80279393 -23215581 + L1MB7 LINE L1 5619 5660 -524 5 1197 780 232 142 86 chr15 80279393 80279752 -23215222 + MTE2a LTR MaLR 1 379 0 5 1197 363 326 93 21 chr15 80279752 80279988 -23214986 + L1MB7 LINE L1 5661 5917 -267 5 1197 1500 174 291 68 chr15 80280104 80280574 -23214400 - RMER15 LTR ERVL 0 575 1 5 1197 1328 250 34 38 chr15 80280581 80280901 -23214073 + ORR1E LTR MaLR 3 321 -38 5 1197 566 181 0 0 chr15 80281243 80281337 -23213637 + RSINE1 SINE B4 3 96 -69 5 1197 1249 113 38 0 chr15 80281366 80281552 -23213422 - B2_Mm2 SINE B2 0 195 3 5 1197 279 293 24 0 chr15 80281768 80281850 -23213124 - RSINE1 SINE B4 -3 162 79 5 1197 252 0 0 0 chr15 80282025 80282053 -23212921 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 5 1197 822 228 70 30 chr15 80284104 80284303 -23210671 + B3 SINE B2 2 208 -8 5 1197 1099 196 42 5 chr15 80284439 80284654 -23210320 - ID_B1 SINE B4 0 224 2 5 1197 345 301 78 23 chr15 80285298 80285516 -23209458 - HAL1 LINE L1 -713 1794 1565 5 1197 549 328 83 21 chr15 80285568 80285808 -23209166 - B4 SINE B4 -4 288 34 5 1197 423 68 0 0 chr15 80285942 80286001 -23208973 + (TATG)n Simple_repeat Simple_repeat 4 62 0 5 1197 829 196 7 0 chr15 80286001 80286139 -23208835 - B3 SINE B2 -76 140 2 5 1197 247 326 78 37 chr15 80286139 80286435 -23208539 - HAL1 LINE L1 -1009 1498 1191 5 1197 314 271 102 96 chr15 80286590 80286757 -23208217 - B4 SINE B4 -120 172 5 5 1197 3017 209 190 20 chr15 80286764 80287575 -23207399 - RMER1A Other Other 0 1030 82 5 1197 1425 234 85 14 chr15 80287576 80288356 -23206618 - RMER1A Other Other -556 510 1 5 1197 238 217 50 0 chr15 80288642 80288702 -23206272 - RSINE1 SINE B4 -29 136 74 5 1197 471 149 34 106 chr15 80288960 80289114 -23205860 - B1_Mur4 SINE Alu 0 150 13 5 1197 252 289 53 117 chr15 80289011 80289199 -23205775 + MTEb LTR MaLR 204 379 0 5 1197 1133 78 0 0 chr15 80290031 80290172 -23204802 - B1_Mus1 SINE Alu -6 142 2 5 1197 1053 168 127 0 chr15 80290176 80290373 -23204601 + URR1A DNA MER1_type 1 222 -4 5 1197 305 273 132 11 chr15 80291383 80291557 -23203417 + L1MB7 LINE L1 5931 6125 -59 5 1197 1197 193 4 39 chr15 80291595 80291827 -23203147 - B4A SINE B4 -68 224 1 5 1197 715 198 173 1 chr15 80293149 80293439 -23201535 - MTE2b LTR MaLR -2 357 20 5 1197 376 290 64 14 chr15 80293316 80293456 -23201518 - MT2A LTR ERVL -386 147 1 5 1197 523 261 9 9 chr15 80293751 80293863 -23201111 - B3A SINE B2 -85 113 2 5 1197 224 284 165 10 chr15 80293991 80294094 -23200880 - L2b LINE L2 -13 3362 3244 5 1197 2258 153 73 8 chr15 80294533 80294928 -23200046 + MTC LTR MaLR 1 421 0 5 1197 289 253 42 52 chr15 80295134 80295230 -23199744 - MIR SINE MIR -145 117 23 5 1197 639 237 44 25 chr15 80295381 80295541 -23199433 + RSINE1 SINE B4 3 165 0 5 1197 222 118 0 0 chr15 80295552 80295586 -23199388 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 5 1197 211 150 25 0 chr15 80295701 80295741 -23199233 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 5 1197 806 200 128 0 chr15 80296317 80296512 -23198462 - ID_B1 SINE B4 0 224 5 5 1197 351 0 0 0 chr15 80296592 80296631 -23198343 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1197 604 286 27 20 chr15 80296643 80296793 -23198181 - B3A SINE B2 -47 151 1 5 1197 1217 308 64 25 chr15 80296954 80297624 -23197350 - L1MEf LINE L1 -1904 5102 4407 5 1197 255 231 72 32 chr15 80297640 80297765 -23197209 - L1MC4 LINE L1 -1299 6743 6614 5 1197 374 188 16 0 chr15 80298034 80298098 -23196876 - tRNA-Ala-GCY_ tRNA tRNA -10 65 1 5 1197 612 312 70 15 chr15 80298339 80298609 -23196365 - B4A SINE B4 -7 285 1 5 1197 774 136 165 47 chr15 80298641 80298811 -23196163 - B2_Mm2 SINE B2 -4 191 2 5 1197 315 279 13 0 chr15 80298872 80298951 -23196023 - ID4 SINE ID 0 83 4 5 1197 371 186 64 64 chr15 80298957 80299066 -23195908 - PB1D10 SINE Alu -6 111 3 5 1197 267 229 34 181 chr15 80299087 80299236 -23195738 - B2_Mm1a SINE B2 0 193 67 5 1197 515 311 100 69 chr15 80299290 80299680 -23195294 - L1MEf LINE L1 -4305 2797 2396 5 1197 630 318 123 9 chr15 80299819 80300274 -23194700 - L1MEf LINE L1 -4867 2235 1717 5 1197 370 321 28 28 chr15 80300307 80300448 -23194526 - B1F SINE Alu -6 143 3 5 1197 261 258 65 50 chr15 80300449 80300588 -23194386 - L1MEf LINE L1 -5806 1528 1388 5 1197 234 0 0 0 chr15 80300591 80300617 -23194357 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 5 1197 677 307 6 0 chr15 80300642 80300821 -23194153 - B3A SINE B2 -18 180 1 5 1197 249 306 34 95 chr15 80301212 80301360 -23193614 + Charlie12 DNA MER1_type 27 165 -2708 5 1197 1124 71 0 21 chr15 80301472 80301615 -23193359 + B1_Mus1 SINE Alu 3 142 -6 5 1197 207 0 0 0 chr15 80301618 80301641 -23193333 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1197 266 254 17 0 chr15 80301898 80301957 -23193017 - RMER30 DNA MER1_type -134 68 9 5 1197 246 62 0 0 chr15 80303301 80303333 -23191641 + (TCCA)n Simple_repeat Simple_repeat 2 33 0 5 1197 304 261 193 43 chr15 80303336 80303476 -23191498 - RSINE1 SINE B4 -2 163 3 5 1197 318 241 111 0 chr15 80303960 80304068 -23190906 - PB1D9 SINE Alu 0 120 1 5 1197 233 337 11 33 chr15 80306929 80307085 -23187889 + GA-rich Low_complexity Low_complexity 1 152 0 5 1197 1225 68 0 0 chr15 80308531 80308679 -23186295 - B1_Mus1 SINE Alu 0 148 1 5 1197 203 208 19 0 chr15 80309126 80309179 -23185795 + (TTATA)n Simple_repeat Simple_repeat 5 58 0 5 1197 346 330 19 0 chr15 80309242 80309348 -23185626 - PB1D10 SINE Alu -9 108 1 5 1197 250 383 25 8 chr15 80309348 80309376 -23185598 - ID SINE ID -141 83 54 5 1197 203 254 27 53 chr15 80309529 80309604 -23185370 + L2a LINE L2 3353 3425 -1 5 1197 280 227 178 22 chr15 80310147 80310237 -23184737 + PB1D10 SINE Alu 13 116 -1 5 1197 21 0 0 0 chr15 80310238 80310259 -23184715 + AT_rich Low_complexity Low_complexity 1 21 0 5 1197 388 250 0 0 chr15 80310390 80310462 -23184512 - ID4_ SINE ID -11 72 1 5 1197 222 176 0 0 chr15 80310518 80310552 -23184422 + ID SINE ID 3 36 -188 5 1197 258 288 12 0 chr15 80311238 80311318 -23183656 + ID4 SINE ID 2 82 -1 5 1197 252 337 12 0 chr15 80312441 80312524 -23182450 - L2a LINE L2 0 3426 3343 5 1197 348 43 0 0 chr15 80313556 80313602 -23181372 + (A)n Simple_repeat Simple_repeat 1 46 0 5 1197 183 42 0 0 chr15 80314236 80314260 -23180714 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1197 1170 256 109 21 chr15 80316326 80316657 -23178317 - MTD LTR MaLR -55 364 5 5 1197 803 289 150 30 chr15 80317216 80317827 -23177147 - L1MA9 LINE L1 -3 6297 5601 5 1197 209 345 94 47 chr15 80317848 80318125 -23176849 + L2 LINE L2 1812 2101 -1318 6 1197 687 284 66 66 chr15 80318143 80318460 -23176514 - L2a LINE L2 0 3426 3110 6 1197 3546 20 5 0 chr15 80318751 80319145 -23175829 + MTA_Mm LTR MaLR 1 396 0 6 1197 251 319 58 131 chr15 80319591 80319865 -23175109 - LTR78 LTR ERV1 -1050 254 1 6 1197 380 308 52 47 chr15 80321012 80321203 -23173771 + ORR1E LTR MaLR 14 205 -154 6 1197 1429 191 176 11 chr15 80322199 80322569 -23172405 + Lx6 LINE L1 7004 7434 -26 6 1197 292 298 144 8 chr15 80322725 80322850 -23172124 + L2a LINE L2 3280 3421 -5 6 1197 452 194 14 0 chr15 80323384 80323456 -23171518 + ID4 SINE ID 4 76 -7 6 1197 182 275 157 14 chr15 80323670 80323740 -23171234 - L2c LINE L2 -30 3396 3317 6 1197 203 267 39 11 chr15 80325045 80325123 -23169851 - L2c LINE L2 -231 3156 3071 6 1197 373 204 22 14 chr15 80325700 80325839 -23169135 + CT-rich Low_complexity Low_complexity 1 140 0 6 1197 184 208 60 40 chr15 80325860 80325910 -23169064 + MIR SINE MIR 86 136 -126 6 1197 234 279 16 16 chr15 80326162 80326224 -23168750 + L2c LINE L2 3264 3325 -62 6 1197 485 217 140 52 chr15 80326224 80326360 -23168614 - B1F2 SINE Alu -1 148 1 6 1197 194 286 125 67 chr15 80327297 80327417 -23167557 - L2a LINE L2 -157 3269 3143 6 1197 354 45 0 0 chr15 80327486 80327530 -23167444 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1197 499 326 57 30 chr15 80327700 80328000 -23166974 + ERVL-B4-int LTR ERVL 3189 3496 -2218 6 1197 2473 73 28 0 chr15 80328098 80328415 -23166559 - ORR1A2 LTR MaLR -1 326 1 6 1197 398 320 73 4 chr15 80329309 80329557 -23165417 + L1M5 LINE L1 3691 3955 -2191 6 1197 301 299 108 18 chr15 80329768 80329935 -23165039 + L1M5 LINE L1 4186 4367 -1779 6 1197 362 298 44 0 chr15 80330126 80330240 -23164734 - Tigger5 DNA MER2_type -2207 199 81 6 1197 318 255 21 0 chr15 80330395 80330489 -23164485 + L1M5 LINE L1 4542 4637 -1509 6 1197 667 274 151 16 chr15 80331997 80332249 -23162725 + B4A SINE B4 1 286 -6 6 1197 291 161 0 31 chr15 80332516 80332580 -23162394 - B4A SINE B4 -14 278 217 6 1197 482 297 29 43 chr15 80332626 80332844 -23162130 - RSINE1 SINE B4 -11 281 25 6 1197 5097 192 63 13 chr15 80332860 80332978 -23161996 - Lx9 LINE L1 -8 7636 7520 6 1197 360 0 0 0 chr15 80332978 80333018 -23161956 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1197 5881 187 60 17 chr15 80333018 80334094 -23160880 - Lx9 LINE L1 -125 7519 6391 6 1197 364 233 22 65 chr15 80334099 80334191 -23160783 - B4A SINE B4 -199 93 6 6 1197 299 302 50 0 chr15 80334458 80334577 -23160397 + L1M5 LINE L1 5414 5538 -656 6 1197 366 23 0 0 chr15 80334842 80334885 -23160089 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1197 267 175 105 0 chr15 80334885 80334942 -23160032 - B3A SINE B2 -133 65 3 6 1197 23 54 0 0 chr15 80335240 80335277 -23159697 + AT_rich Low_complexity Low_complexity 1 37 0 6 1197 1163 246 90 98 chr15 80335432 80335986 -23158988 + MLT1G3 LTR MaLR 8 557 -38 6 1197 521 236 198 34 chr15 80336268 80336505 -23158469 + B4A SINE B4 1 276 -16 6 1197 847 52 37 0 chr15 80336545 80336679 -23158295 + (CA)n Simple_repeat Simple_repeat 2 140 0 6 1197 691 263 219 59 chr15 80336892 80337023 -23157951 + L1MC1 LINE L1 5723 5890 -443 6 1197 563 0 0 15 chr15 80337023 80337091 -23157883 + (TTCC)n Simple_repeat Simple_repeat 3 69 0 6 1197 702 91 0 0 chr15 80337096 80337195 -23157779 + (TTCTC)n Simple_repeat Simple_repeat 1 99 0 6 1197 988 104 12 12 chr15 80337195 80337360 -23157614 + (TTTC)n Simple_repeat Simple_repeat 1 165 0 6 1197 931 136 0 0 chr15 80337360 80337492 -23157482 - B1_Mur3 SINE Alu -13 136 5 6 1197 691 263 219 59 chr15 80337492 80337878 -23157096 + L1MC1 LINE L1 5893 6329 -4 6 1197 343 238 86 65 chr15 80337997 80338136 -23156838 + B1_Mur1 SINE Alu 1 142 -7 6 1197 28 0 0 0 chr15 80338234 80338262 -23156712 + AT_rich Low_complexity Low_complexity 1 28 0 6 1197 340 257 257 0 chr15 80338819 80338932 -23156042 - B1F SINE Alu -7 142 1 6 1197 876 197 17 17 chr15 80339115 80339296 -23155678 + B3 SINE B2 36 216 0 6 1197 531 294 37 26 chr15 80339785 80339974 -23155000 + B3A SINE B2 5 195 -3 6 1197 1822 122 79 183 chr15 80339979 80340075 -23154899 + MTC LTR MaLR 1 97 -324 6 1197 1581 47 16 0 chr15 80340075 80340266 -23154708 + B2_Mm2 SINE B2 1 194 -1 6 1197 1822 122 79 183 chr15 80340266 80340349 -23154625 + MTC LTR MaLR 98 116 -305 6 1197 808 169 7 0 chr15 80340349 80340485 -23154489 - B1_Mus1 SINE Alu -9 139 3 6 1197 1822 122 79 183 chr15 80340485 80340774 -23154200 + MTC LTR MaLR 117 421 0 6 1197 697 296 118 9 chr15 80340838 80341159 -23153815 - L1MD1 LINE L1 -273 5969 5614 6 1197 433 119 40 44 chr15 80341179 80341278 -23153696 - PB1D9 SINE Alu 0 120 26 6 1197 225 270 16 0 chr15 80341267 80341330 -23153644 - B3A SINE B2 -132 66 3 6 1197 421 273 63 44 chr15 80341339 80341497 -23153477 - L1MD1 LINE L1 -765 5594 5408 6 1197 333 202 67 9 chr15 80341579 80341684 -23153290 - L1MC LINE L1 -2172 3974 3864 6 1197 483 248 108 3 chr15 80342008 80342148 -23152826 + L1MC LINE L1 5688 5841 -343 6 1197 447 302 108 20 chr15 80342250 80342500 -23152474 - B4A SINE B4 -20 272 1 6 1197 22 35 0 0 chr15 80343101 80343130 -23151844 + AT_rich Low_complexity Low_complexity 1 29 0 6 1197 241 167 24 0 chr15 80343880 80343922 -23151052 + Lx8 LINE L1 7139 7181 -292 6 1197 195 254 0 0 chr15 80344042 80344105 -23150869 + GA-rich Low_complexity Low_complexity 1 63 0 6 1197 357 183 99 0 chr15 80344230 80344301 -23150673 + ID4_ SINE ID 3 80 -3 6 1197 362 225 124 0 chr15 80345485 80345614 -23149360 + Charlie2a DNA MER1_type 78 222 -2639 6 1197 261 319 34 61 chr15 80345895 80346042 -23148932 + Charlie2a DNA MER1_type 464 606 -2255 6 1197 434 237 76 8 chr15 80346156 80346288 -23148686 + B1F2 SINE Alu 9 149 0 6 1197 1114 301 100 23 chr15 80346430 80347072 -23147902 + Charlie2a DNA MER1_type 1470 2160 -701 6 1198 243 271 93 9 chr15 80347233 80347341 -23147633 + PB1D9 SINE Alu 1 117 -3 6 1198 543 254 6 92 chr15 80347548 80347771 -23147203 + B3A SINE B2 8 213 -3 6 1198 492 210 40 10 chr15 80347877 80347978 -23146996 - PB1D10 SINE Alu -8 109 6 6 1198 228 288 0 17 chr15 80347927 80347987 -23146987 - B4A SINE B4 -152 140 82 6 1198 516 246 40 119 chr15 80348730 80349033 -23145941 - MTE2a LTR MaLR -122 257 2 6 1198 232 239 146 11 chr15 80349707 80349796 -23145178 + PB1 SINE Alu 1 101 -26 6 1198 1072 286 7 20 chr15 80349847 80350143 -23144831 + B4A SINE B4 1 292 0 6 1198 216 196 0 56 chr15 80350160 80350176 -23144798 + polypurine Low_complexity Low_complexity 3 18 0 6 1198 1265 41 0 0 chr15 80350176 80350323 -23144651 + B1_Mus1 SINE Alu 1 147 -1 6 1198 216 196 0 56 chr15 80350323 80350360 -23144614 + polypurine Low_complexity Low_complexity 19 53 0 6 1198 481 219 21 0 chr15 80350495 80350591 -23144383 - B1F SINE Alu -51 98 1 6 1198 3549 35 16 2 chr15 80350697 80351121 -23143853 - L1Md_F3 LINE L1 0 6584 6155 6 1198 2891 15 9 3 chr15 80351121 80351455 -23143519 + L1Md_F3 LINE L1 5728 6063 -521 6 1198 341 329 20 40 chr15 80351791 80351943 -23143031 - LTR16A LTR ERVL -248 203 55 6 1198 214 200 0 22 chr15 80352331 80352377 -23142597 + GA-rich Low_complexity Low_complexity 2 46 0 6 1198 324 234 0 0 chr15 80353107 80353171 -23141803 - RMER30 DNA MER1_type -6 196 133 6 1198 239 284 98 69 chr15 80353437 80353641 -23141333 - L1M5 LINE L1 -765 5381 5172 6 1198 627 281 34 56 chr15 80353637 80353905 -23141069 + L1M2 LINE L1 4725 4986 -1157 6 1198 601 294 138 8 chr15 80353968 80354229 -23140745 - MLT1E2 LTR MaLR -119 508 214 6 1198 273 262 25 0 chr15 80354433 80354513 -23140461 + ID4_ SINE ID 1 82 -1 6 1198 305 256 93 0 chr15 80354535 80354621 -23140353 + RSINE1 SINE B4 10 103 -62 6 1198 417 20 0 0 chr15 80354642 80354692 -23140282 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1198 1164 75 7 0 chr15 80354704 80354850 -23140124 - B1_Mus2 SINE Alu 0 147 1 6 1198 1212 34 0 13 chr15 80354931 80355080 -23139894 - B1_Mus2 SINE Alu 0 147 1 6 1198 230 283 0 20 chr15 80355574 80355675 -23139299 - L1M5 LINE L1 -1469 4677 4579 6 1198 416 325 96 10 chr15 80355675 80355874 -23139100 + MER20 DNA MER1_type 3 218 -1 6 1198 366 284 103 26 chr15 80355884 80356079 -23138895 - L1M5 LINE L1 -1573 4573 4364 6 1198 673 275 0 27 chr15 80356087 80356233 -23138741 + RSINE1 SINE B4 3 144 -21 6 1198 414 0 0 0 chr15 80356236 80356282 -23138692 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1198 271 93 18 53 chr15 80356285 80356342 -23138632 + GA-rich Low_complexity Low_complexity 6 60 0 6 1198 1076 163 34 15 chr15 80356368 80356574 -23138400 + B3 SINE B2 4 213 -3 6 1198 1204 84 0 0 chr15 80356603 80356769 -23138205 - B2_Mm2 SINE B2 -29 166 1 6 1198 540 278 54 30 chr15 80356975 80357142 -23137832 - B4A SINE B4 -19 273 103 6 1198 325 284 10 10 chr15 80357622 80357718 -23137256 + (TG)n Simple_repeat Simple_repeat 1 96 0 6 1198 488 275 101 0 chr15 80357745 80357894 -23137080 - RSINE1 SINE B4 0 165 2 6 1198 240 59 0 0 chr15 80358333 80358367 -23136607 + (TTTTG)n Simple_repeat Simple_repeat 1 34 0 6 1198 310 179 111 37 chr15 80358367 80358439 -23136535 - PB1D7 SINE Alu -13 107 27 6 1198 545 188 14 11 chr15 80358724 80359099 -23135875 + (TG)n Simple_repeat Simple_repeat 1 376 0 6 1198 292 168 40 0 chr15 80359145 80359270 -23135704 + (TG)n Simple_repeat Simple_repeat 2 131 0 6 1198 397 238 36 0 chr15 80359739 80359823 -23135151 + PB1D10 SINE Alu 13 99 -18 6 1198 659 75 0 11 chr15 80359840 80359935 -23135039 + (GAAA)n Simple_repeat Simple_repeat 1 94 0 6 1198 180 0 0 0 chr15 80360186 80360206 -23134768 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 1198 220 313 72 0 chr15 80362444 80362527 -23132447 - B1F1 SINE Alu -55 94 6 6 1198 248 319 88 15 chr15 80362537 80362674 -23132300 - MARNA DNA Mariner -252 334 188 6 1198 231 224 0 0 chr15 80363086 80363135 -23131839 + B4A SINE B4 8 56 -236 6 1198 502 276 79 83 chr15 80363222 80363463 -23131511 + B4A SINE B4 46 285 -7 6 1198 249 33 0 0 chr15 80363493 80363523 -23131451 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1198 423 250 123 12 chr15 80364019 80364189 -23130785 - MLT1A0 LTR MaLR -171 194 6 6 1198 938 276 30 0 chr15 80365473 80365738 -23129236 + B4A SINE B4 1 273 -19 6 1198 199 244 0 0 chr15 80366425 80366470 -23128504 + L2a LINE L2 3382 3426 0 6 1198 1039 215 5 0 chr15 80367292 80367497 -23127477 + B3 SINE B2 10 215 -1 7 1198 21 57 0 0 chr15 80367531 80367566 -23127408 + AT_rich Low_complexity Low_complexity 1 35 0 7 1198 1918 132 116 46 chr15 80367594 80367966 -23127008 - RMER10B LTR ERVL 0 398 1 7 1198 767 193 7 0 chr15 80368882 80369027 -23125947 - URR1A DNA MER1_type 0 226 81 7 1198 237 227 78 26 chr15 80369117 80369194 -23125780 + ID4 SINE ID 1 81 -2 7 1198 421 252 126 71 chr15 80369877 80370146 -23124828 + B4 SINE B4 2 285 -7 7 1198 198 0 0 0 chr15 80370151 80370173 -23124801 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 1198 689 252 100 38 chr15 80370525 80370599 -23124375 + Lx8 LINE L1 6707 6777 -696 7 1198 3412 35 5 0 chr15 80370599 80370993 -23123981 + MTA_Mm LTR MaLR 1 396 0 7 1198 689 252 100 38 chr15 80370993 80371157 -23123817 + Lx8 LINE L1 6778 6960 -513 7 1198 1133 277 77 20 chr15 80371181 80371572 -23123402 + Lx8 LINE L1 7061 7473 0 7 1198 395 193 33 33 chr15 80371603 80371694 -23123280 + PB1D10 SINE Alu 18 108 -9 7 1198 421 245 11 0 chr15 80371703 80371797 -23123177 + RSINE1 SINE B4 2 96 -69 7 1198 599 261 6 19 chr15 80371826 80371986 -23122988 - RSINE1 SINE B4 -1 164 7 7 1198 1367 37 9 168 chr15 80372325 80372369 -23122605 + B2_Mm2 SINE B2 1 34 -161 7 1198 1081 95 7 7 chr15 80372369 80372517 -23122457 + B1_Mus1 SINE Alu 1 148 0 7 1198 1367 37 9 168 chr15 80372517 80372698 -23122276 + B2_Mm2 SINE B2 35 190 -5 7 1198 1202 62 0 0 chr15 80372699 80372844 -23122130 + B1_Mus1 SINE Alu 1 145 -3 7 1198 259 183 0 40 chr15 80372864 80372938 -23122036 + GA-rich Low_complexity Low_complexity 3 73 0 7 1198 1091 186 55 5 chr15 80372953 80373153 -23121821 + B3 SINE B2 1 210 -6 7 1198 252 0 0 0 chr15 80373355 80373383 -23121591 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 7 1198 750 171 7 58 chr15 80374188 80374325 -23120649 + B1_Mus1 SINE Alu 3 132 -16 7 1198 411 68 0 0 chr15 80374325 80374384 -23120590 + (TG)n Simple_repeat Simple_repeat 1 59 0 7 1198 414 0 0 0 chr15 80374384 80374429 -23120545 + (GA)n Simple_repeat Simple_repeat 1 46 0 7 1198 379 275 0 0 chr15 80375126 80375217 -23119757 - ID_B1 SINE B4 0 224 134 7 1198 775 211 109 16 chr15 80375280 80375463 -23119511 - B4 SINE B4 -66 226 27 7 1198 241 327 27 27 chr15 80375801 80375911 -23119063 - MIRb SINE MIR -92 176 67 7 1198 194 0 39 0 chr15 80376330 80376356 -23118618 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1198 472 169 0 157 chr15 80376734 80376760 -23118214 + MT2B LTR ERVL 147 150 -451 7 1198 979 103 0 27 chr15 80376760 80376909 -23118065 + B1_Mus2 SINE Alu 3 147 0 7 1198 351 150 0 0 chr15 80376909 80376969 -23118005 + (A)n Simple_repeat Simple_repeat 1 60 0 7 1198 32 26 0 0 chr15 80377051 80377090 -23117884 + AT_rich Low_complexity Low_complexity 1 39 0 7 1198 939 117 13 33 chr15 80377562 80377712 -23117262 + B1_Mur3 SINE Alu 3 149 0 7 1198 371 324 37 0 chr15 80377996 80378132 -23116842 - Tigger7 DNA MER2_type -9 2482 2342 7 1198 1285 264 124 23 chr15 80378182 80378745 -23116229 + L1MCa LINE L1 446 1065 -5443 7 1198 1324 254 132 50 chr15 80378803 80379461 -23115513 + L1MCa LINE L1 1156 1881 -4627 7 1198 703 226 40 15 chr15 80379461 80379663 -23115311 + ID_B1 SINE B4 1 207 -17 7 1198 1324 267 68 14 chr15 80379663 80379796 -23115178 + L1MCa LINE L1 1882 2060 -4448 7 1198 232 370 73 34 chr15 80379962 80380141 -23114833 - ORR1E LTR MaLR -123 236 51 7 1198 476 254 87 12 chr15 80380348 80380591 -23114383 + L1MCa LINE L1 2206 2458 -3863 7 1198 627 261 94 29 chr15 80380770 80381015 -23113959 + B4A SINE B4 10 270 -22 7 1198 528 16 0 0 chr15 80381018 80381079 -23113895 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1198 480 307 29 36 chr15 80381103 80381386 -23113588 + L1MCa LINE L1 2397 2651 -3404 7 1198 1041 208 107 7 chr15 80381381 80381634 -23113340 + L1MC LINE L1 2636 2905 -3241 7 1198 1266 108 49 0 chr15 80381634 80381787 -23113187 + B2_Mm2 SINE B2 1 153 -42 7 1198 705 82 0 0 chr15 80381787 80381884 -23113090 + (TA)n Simple_repeat Simple_repeat 1 97 0 7 1198 1266 108 49 0 chr15 80381884 80381915 -23113059 + B2_Mm2 SINE B2 154 192 -3 7 1198 739 264 19 71 chr15 80381915 80382009 -23112965 + L1MC LINE L1 2902 2988 -3158 7 1198 243 0 0 0 chr15 80382085 80382112 -23112862 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1198 319 247 0 90 chr15 80383377 80383466 -23111508 + PB1D10 SINE Alu 36 116 -1 7 1198 284 227 83 53 chr15 80383575 80383771 -23111203 + L1MB5 LINE L1 3753 3960 -2186 7 1198 521 287 13 51 chr15 80383771 80383929 -23111045 + RSINE1 SINE B4 1 152 -13 7 1198 288 0 0 0 chr15 80383934 80383966 -23111008 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 1198 587 178 0 36 chr15 80384070 80384181 -23110793 + PB1D10 SINE Alu 10 116 -1 7 1198 299 276 81 0 chr15 80384193 80384280 -23110694 + L1MB5 LINE L1 4013 4106 -2040 7 1198 504 248 47 0 chr15 80384281 80384410 -23110564 - ORR1D2 LTR MaLR -26 344 210 7 1198 537 269 15 0 chr15 80384438 80384572 -23110402 - B1_Mur2 SINE Alu -11 138 3 7 1198 4047 75 35 19 chr15 80384586 80384664 -23110310 - L1Md_F2 LINE L1 -10 6572 6492 7 1198 207 0 0 0 chr15 80384664 80384687 -23110287 + (CCCCCA)n Simple_repeat Simple_repeat 6 28 0 7 1198 4047 75 35 19 chr15 80384687 80385178 -23109796 - L1Md_F2 LINE L1 -91 6491 5996 7 1198 558 99 0 0 chr15 80385178 80385259 -23109715 - MTC LTR MaLR -340 81 1 7 1198 3948 194 11 12 chr15 80385293 80386381 -23108593 + Lx9 LINE L1 6306 7481 -163 7 1198 1958 155 38 42 chr15 80386383 80386813 -23108161 - RMER20A LTR ERVK -14 502 3 7 1198 351 194 97 0 chr15 80386813 80386916 -23108058 + Lx9 LINE L1 7532 7644 0 7 1198 804 277 137 19 chr15 80386934 80387357 -23107617 + L1MB5 LINE L1 4548 5020 -1126 7 1198 1700 157 68 15 chr15 80387359 80387706 -23107268 + MTC LTR MaLR 1 411 -8 7 1198 1109 231 56 44 chr15 80387716 80387862 -23107112 + L1MB5 LINE L1 5017 5165 -981 7 1198 811 204 0 7 chr15 80387862 80388010 -23106964 + B1_Mur1 SINE Alu 1 147 -2 7 1198 1109 300 122 26 chr15 80388010 80388793 -23106181 + L1MB5 LINE L1 5166 6022 -152 7 1198 480 240 82 37 chr15 80388895 80389029 -23105945 + ID_B1 SINE B4 82 221 -3 7 1198 297 0 0 0 chr15 80389144 80389177 -23105797 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1198 357 82 0 0 chr15 80389177 80389225 -23105749 + (TA)n Simple_repeat Simple_repeat 2 50 0 7 1198 371 284 228 8 chr15 80389283 80389546 -23105428 + L1MC3 LINE L1 5811 6131 -1654 7 1198 238 245 117 48 chr15 80390238 80390341 -23104633 + PB1D10 SINE Alu 1 110 -7 7 1198 180 0 0 0 chr15 80390968 80390988 -23103986 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1198 197 355 54 41 chr15 80393420 80393567 -23101407 + L2a LINE L2 3247 3395 -31 7 1198 324 0 0 0 chr15 80393875 80393911 -23101063 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1198 470 314 184 7 chr15 80394041 80394323 -23100651 - MER46C DNA MER2_type -2 336 5 7 1198 968 215 21 0 chr15 80394334 80394520 -23100454 + B3 SINE B2 2 191 -25 7 1198 306 0 0 0 chr15 80394522 80394556 -23100418 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 7 1198 189 226 194 0 chr15 80395037 80395099 -23099875 + MIR SINE MIR 110 183 -79 7 1198 422 372 92 58 chr15 80395976 80396337 -23098637 - L2c LINE L2 -25 3362 2967 7 1198 203 316 35 0 chr15 80396918 80396975 -23097999 - MIRm SINE MIR -19 257 199 7 1198 598 365 83 4 chr15 80397401 80397679 -23097295 + Tigger7 DNA MER2_type 5 304 -2187 7 1198 268 240 215 28 chr15 80397722 80397829 -23097145 + Tigger7 DNA MER2_type 2132 2258 -233 7 1198 947 234 16 0 chr15 80397825 80398017 -23096957 - B3 SINE B2 -21 195 1 7 1198 534 154 51 60 chr15 80398020 80398137 -23096837 - B1F2 SINE Alu 0 149 34 7 1198 445 270 31 75 chr15 80398186 80398346 -23096628 + Tigger7 DNA MER2_type 2331 2483 -8 7 1198 225 0 0 0 chr15 80398973 80398998 -23095976 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 7 1198 274 200 0 0 chr15 80399542 80399587 -23095387 - B1_Mur2 SINE Alu -57 92 48 7 1198 558 264 0 0 chr15 80399588 80399694 -23095280 - B1F SINE Alu -17 132 27 7 1198 231 304 58 75 chr15 80399949 80400123 -23094851 + L2a LINE L2 2782 2952 -467 7 1198 182 299 197 0 chr15 80400203 80400320 -23094654 + L2a LINE L2 3286 3425 -1 7 1198 186 43 0 0 chr15 80400439 80400462 -23094512 + (T)n Simple_repeat Simple_repeat 1 23 0 7 1198 1200 108 23 6 chr15 80401139 80401316 -23093658 - B2_Mm2 SINE B2 -14 181 2 7 1198 292 323 31 41 chr15 80401355 80401452 -23093522 + B3A SINE B2 67 162 -36 7 1198 228 274 0 0 chr15 80401483 80401534 -23093440 - L2a LINE L2 -7 3419 3369 7 1198 254 216 29 184 chr15 80401581 80401717 -23093257 + PB1D7 SINE Alu 1 115 -5 7 1198 473 189 0 70 chr15 80401752 80401765 -23093209 + MT2B LTR ERVL 152 156 -445 7 1198 581 182 37 25 chr15 80401765 80401896 -23093078 + B1_Mur4 SINE Alu 1 120 0 7 1198 463 112 75 0 chr15 80404226 80404306 -23090668 - B1_Mur4 SINE Alu -13 137 52 7 1198 21 0 0 0 chr15 80404916 80404937 -23090037 + AT_rich Low_complexity Low_complexity 1 21 0 7 1198 417 294 39 46 chr15 80405089 80405242 -23089732 + RSINE1 SINE B4 3 154 -11 7 1198 180 167 56 0 chr15 80405497 80405533 -23089441 - MIR SINE MIR -7 255 218 7 1198 363 205 216 24 chr15 80405772 80405897 -23089077 + B1F2 SINE Alu 1 149 0 7 1198 333 223 95 11 chr15 80405990 80406085 -23088889 - L1MC4 LINE L1 -146 7896 7794 7 1198 495 246 148 0 chr15 80406407 80406529 -23088445 - RSINE1 SINE B4 -1 164 25 7 1198 260 345 64 49 chr15 80406588 80406681 -23088293 - L1MC4 LINE L1 -612 7430 7335 7 1198 270 0 0 0 chr15 80406681 80406711 -23088263 + (TC)n Simple_repeat Simple_repeat 1 30 0 7 1198 260 345 64 49 chr15 80406711 80406821 -23088153 - L1MC4 LINE L1 -708 7334 7224 7 1198 242 280 184 27 chr15 80406998 80407097 -23087877 + MIR SINE MIR 34 140 -122 7 1198 468 0 0 0 chr15 80407097 80407149 -23087825 + (GA)n Simple_repeat Simple_repeat 1 52 0 7 1198 242 280 184 27 chr15 80407149 80407196 -23087778 + MIR SINE MIR 141 203 -59 7 1198 208 153 32 48 chr15 80407776 80407838 -23087136 + (TCG)n Simple_repeat Simple_repeat 1 61 0 7 1198 21 0 0 0 chr15 80407855 80407876 -23087098 + AT_rich Low_complexity Low_complexity 1 21 0 7 1198 975 249 54 54 chr15 80408685 80408944 -23086030 + B4A SINE B4 8 266 -26 7 1198 246 32 0 0 chr15 80408948 80408979 -23085995 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 1198 272 305 76 30 chr15 80409572 80409704 -23085270 + MIR3 SINE MIR 46 183 -25 7 1198 992 281 58 7 chr15 80410132 80410408 -23084566 + B4A SINE B4 1 290 -2 7 1198 197 147 29 0 chr15 80412160 80412194 -23082780 - L2c LINE L2 -228 3159 3125 7 1198 315 122 0 0 chr15 80412223 80412272 -23082702 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1198 299 268 0 14 chr15 80412275 80412347 -23082627 - B4A SINE B4 -4 288 218 8 1198 467 295 77 66 chr15 80412344 80412540 -23082434 - B3A SINE B2 0 198 1 8 1198 872 261 48 26 chr15 80412540 80412765 -23082209 - B4A SINE B4 -62 230 1 8 1198 409 355 109 0 chr15 80413052 80413272 -23081702 - L3 LINE CR1 -439 4050 3807 8 1198 310 74 18 18 chr15 80413279 80413334 -23081640 + (TC)n Simple_repeat Simple_repeat 1 55 0 8 1198 237 33 0 0 chr15 80413338 80413368 -23081606 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 1198 406 216 0 43 chr15 80414192 80414284 -23080690 + PB1D9 SINE Alu 33 120 0 8 1198 198 224 0 0 chr15 80414284 80414333 -23080641 + GA-rich Low_complexity Low_complexity 2 50 0 8 1198 691 231 368 0 chr15 80414412 80414624 -23080350 - B4A SINE B4 0 292 3 8 1198 1114 195 11 16 chr15 80414658 80414846 -23080128 + B3 SINE B2 2 188 -28 8 1198 309 26 0 0 chr15 80414846 80414884 -23080090 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 1198 264 254 15 15 chr15 80414911 80414979 -23079995 + ID SINE ID 9 76 -148 8 1198 277 273 10 39 chr15 80415567 80415670 -23079304 + MER5A1 DNA MER1_type 63 162 -4 8 1198 348 255 107 18 chr15 80415898 80416010 -23078964 + MER20 DNA MER1_type 31 152 -67 8 1198 423 0 0 0 chr15 80416646 80416693 -23078281 + (CAAAA)n Simple_repeat Simple_repeat 5 51 0 8 1198 566 282 42 45 chr15 80417752 80417944 -23077030 + ID_B1 SINE B4 48 224 -68 8 1198 659 108 0 9 chr15 80417946 80418058 -23076916 + (TC)n Simple_repeat Simple_repeat 1 111 0 8 1198 252 290 0 28 chr15 80418479 80418550 -23076424 + MIRc SINE MIR 180 248 -20 8 1198 261 269 0 60 chr15 80419210 80419293 -23075681 + MT2B LTR ERVL 163 240 -361 8 1198 766 176 61 0 chr15 80419219 80419350 -23075624 + B1_Mur2 SINE Alu 8 146 -3 8 1198 404 211 21 43 chr15 80419370 80419464 -23075510 + PB1D10 SINE Alu 21 112 -5 8 1198 961 78 0 0 chr15 80419476 80419604 -23075370 + B1_Mus1 SINE Alu 1 128 -20 8 1198 320 275 0 42 chr15 80419609 80419628 -23075346 + ID_B1 SINE B4 130 219 -4 8 1198 391 227 0 0 chr15 80419628 80419703 -23075271 + B1F SINE Alu 70 144 -5 8 1198 364 212 0 29 chr15 80420061 80420123 -23074851 + B3 SINE B2 4 65 -151 8 1198 396 55 0 0 chr15 80420123 80420178 -23074796 + (CA)n Simple_repeat Simple_repeat 1 55 0 8 1198 200 262 99 12 chr15 80420394 80420475 -23074499 - L2 LINE L2 -1888 1531 1444 8 1198 263 274 0 110 chr15 80421566 80421648 -23073326 - ID4_ SINE ID -9 74 2 8 1198 996 228 48 0 chr15 80421657 80421863 -23073111 - ID_B1 SINE B4 -7 217 2 8 1198 22 56 0 0 chr15 80422144 80422180 -23072794 + AT_rich Low_complexity Low_complexity 1 36 0 8 1198 25 0 0 0 chr15 80422266 80422291 -23072683 + AT_rich Low_complexity Low_complexity 1 25 0 8 1198 243 267 0 39 chr15 80422626 80422704 -23072270 + MADE2 DNA Mariner 4 78 -2 8 1198 568 167 29 10 chr15 80423859 80423962 -23071012 + PB1D9 SINE Alu 1 105 -15 8 1198 267 54 0 0 chr15 80423964 80424001 -23070973 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 8 1198 405 0 0 0 chr15 80424824 80424869 -23070105 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 1198 300 289 89 40 chr15 80425019 80425120 -23069854 + PB1 SINE Alu 20 125 -2 8 1198 255 79 0 0 chr15 80425149 80425187 -23069787 + (GA)n Simple_repeat Simple_repeat 2 39 0 8 1198 524 312 22 0 chr15 80425283 80425421 -23069553 + B1F SINE Alu 1 141 -8 8 1198 337 259 33 14 chr15 80425572 80425672 -23069302 + MIR SINE MIR 57 159 -117 8 1198 217 324 101 34 chr15 80425737 80425757 -23069217 - B3A SINE B2 -6 192 2 8 1198 692 229 38 13 chr15 80425757 80425916 -23069058 - RSINE1 SINE B4 0 165 3 8 1198 391 223 126 0 chr15 80425993 80426096 -23068878 - RSINE1 SINE B4 -46 119 4 8 1198 22 35 0 0 chr15 80426162 80426191 -23068783 + AT_rich Low_complexity Low_complexity 1 29 0 8 1198 342 275 124 44 chr15 80426588 80426725 -23068249 - L2b LINE L2 0 3375 3228 8 1198 607 134 76 152 chr15 80427235 80427393 -23067581 + B1_Mur1 SINE Alu 1 146 -3 8 1198 274 296 98 69 chr15 80427416 80427525 -23067449 + ID_B1 SINE B4 5 177 -47 8 1198 323 247 68 0 chr15 80427525 80427598 -23067376 + B1F SINE Alu 37 114 -35 8 1198 536 287 148 6 chr15 80427586 80427768 -23067206 + B4 SINE B4 85 292 0 8 1198 833 288 24 0 chr15 80428293 80428505 -23066469 + ID_B1 SINE B4 1 217 -7 8 1198 1225 69 12 0 chr15 80428505 80428678 -23066296 + (GGAGAA)n Simple_repeat Simple_repeat 3 177 0 8 1198 495 0 0 0 chr15 80428680 80428735 -23066239 + (GGAAA)n Simple_repeat Simple_repeat 1 55 0 8 1198 453 116 0 0 chr15 80428977 80429046 -23065928 + (CA)n Simple_repeat Simple_repeat 1 69 0 8 1198 1003 146 49 0 chr15 80430100 80430264 -23064710 - URR1B DNA MER1_type 0 225 54 8 1198 510 235 155 167 chr15 80430453 80430698 -23064276 + B4 SINE B4 51 292 0 8 1198 1029 110 7 0 chr15 80431186 80431332 -23063642 - B1_Mus1 SINE Alu 0 148 2 8 1198 529 192 0 28 chr15 80431520 80431627 -23063347 - ID_B1 SINE B4 0 224 121 8 1198 489 250 10 0 chr15 80431629 80431729 -23063245 - PB1D10 SINE Alu -16 101 1 8 1198 270 329 65 46 chr15 80431747 80431900 -23063074 + L2b LINE L2 3220 3375 0 8 1198 302 308 0 17 chr15 80432270 80432389 -23062585 + G-rich Low_complexity Low_complexity 1 117 0 8 1198 182 171 0 24 chr15 80432834 80432876 -23062098 + CT-rich Low_complexity Low_complexity 2 42 0 8 1198 1202 171 165 48 chr15 80433706 80434170 -23060804 - RMER5 LTR ERV1 0 534 17 8 1198 2662 174 67 20 chr15 80434177 80434272 -23060702 - RLTR20B3 LTR ERVK 0 577 483 8 1198 375 23 0 0 chr15 80434272 80434316 -23060658 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1198 2662 174 67 20 chr15 80434316 80434771 -23060203 - RLTR20B3 LTR ERVK -95 482 3 8 1198 793 239 58 23 chr15 80434784 80434955 -23060019 + ID_B1 SINE B4 37 213 -11 8 1198 198 0 0 0 chr15 80434955 80434977 -23059997 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 8 1198 897 176 82 34 chr15 80434994 80435200 -23059774 + B3 SINE B2 1 216 0 8 1198 481 280 19 93 chr15 80437389 80437594 -23057380 + ID_B1 SINE B4 4 193 -31 8 1198 269 320 110 0 chr15 80437529 80437629 -23057345 + B1F1 SINE Alu 19 129 -20 8 1198 212 0 36 0 chr15 80437636 80437664 -23057310 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8 1198 558 0 0 0 chr15 80437809 80437871 -23057103 + (GA)n Simple_repeat Simple_repeat 1 62 0 8 1198 256 289 26 0 chr15 80438431 80438507 -23056467 + ID4 SINE ID 5 82 -1 8 1198 279 253 131 12 chr15 80438706 80438790 -23056184 + MER53 DNA hAT 97 190 -3 8 1198 432 77 0 0 chr15 80438988 80439053 -23055921 + (TCTA)n Simple_repeat Simple_repeat 3 67 0 8 1198 677 165 15 38 chr15 80439076 80439208 -23055766 - B1_Mur3 SINE Alu -6 143 15 8 1198 351 247 53 11 chr15 80439220 80439314 -23055660 - PB1D7 SINE Alu -22 98 1 8 1198 297 305 85 9 chr15 80439348 80439454 -23055520 + B1F1 SINE Alu 12 125 -24 8 1198 207 0 0 0 chr15 80439634 80439657 -23055317 + (T)n Simple_repeat Simple_repeat 1 23 0 8 1198 1050 58 15 0 chr15 80439657 80439794 -23055180 - B1_Mus2 SINE Alu 0 147 9 8 1198 1146 57 14 0 chr15 80439818 80439958 -23055016 + B1_Mus2 SINE Alu 2 143 -4 8 1198 795 97 0 0 chr15 80439959 80440073 -23054901 + (GAAA)n Simple_repeat Simple_repeat 3 116 0 8 1198 359 354 47 0 chr15 80440085 80440212 -23054762 - MER91A DNA Tip100 -58 138 6 8 1198 301 229 70 14 chr15 80440866 80440937 -23054037 + ID_B1 SINE B4 20 94 -130 8 1198 1860 223 49 10 chr15 80440937 80441322 -23053652 + Lx6 LINE L1 7012 7411 -49 8 1198 749 247 7 0 chr15 80441338 80441484 -23053490 + ID_B1 SINE B4 78 224 0 8 1198 298 329 49 14 chr15 80441590 80441715 -23053259 - MIRb SINE MIR -147 129 3 8 1198 655 306 20 20 chr15 80441765 80441962 -23053012 + B4 SINE B4 36 232 -60 8 1198 203 306 39 111 chr15 80442217 80442397 -23052577 + L3 LINE CR1 3930 4096 -393 8 1198 360 0 0 0 chr15 80442425 80442465 -23052509 + (TTG)n Simple_repeat Simple_repeat 1 40 0 8 1198 1087 81 0 12 chr15 80442465 80442627 -23052347 + (TTC)n Simple_repeat Simple_repeat 3 162 0 8 1198 275 255 67 58 chr15 80442869 80442973 -23052001 + PB1D7 SINE Alu 1 105 -15 8 1198 1154 20 26 0 chr15 80442977 80443130 -23051844 + (TAGA)n Simple_repeat Simple_repeat 2 158 0 8 1198 455 278 0 34 chr15 80443252 80443371 -23051603 - PB1D10 SINE Alu -2 115 1 8 1198 255 271 0 0 chr15 80444452 80444511 -23050463 + G-rich Low_complexity Low_complexity 1 59 0 8 1198 348 240 0 26 chr15 80444892 80444969 -23050005 + ID4 SINE ID 2 76 -7 8 1198 185 288 181 8 chr15 80445554 80445687 -23049287 - MIRb SINE MIR -112 156 1 8 1198 243 0 0 0 chr15 80446058 80446085 -23048889 + (A)n Simple_repeat Simple_repeat 1 27 0 8 1198 583 261 90 61 chr15 80447624 80447902 -23047072 + B4A SINE B4 1 286 -6 8 1198 383 327 9 0 chr15 80448048 80448155 -23046819 + PB1D7 SINE Alu 1 108 -12 8 1198 1227 28 14 7 chr15 80448910 80449056 -23045918 + B1_Mus1 SINE Alu 1 147 -1 8 1198 22 35 0 0 chr15 80449067 80449096 -23045878 + AT_rich Low_complexity Low_complexity 1 29 0 8 1198 499 240 107 0 chr15 80449118 80449239 -23045735 + ID_B1 SINE B4 90 223 -1 8 1198 552 259 123 6 chr15 80449239 80449410 -23045564 + MER58B DNA MER1_type 151 341 0 8 1198 411 196 22 20 chr15 80449884 80449974 -23045000 + PB1 SINE Alu 24 105 -22 9 1198 199 100 39 39 chr15 80450264 80450316 -23044658 + (TCTCTG)n Simple_repeat Simple_repeat 3 54 0 9 1198 851 234 32 55 chr15 80452887 80453104 -23041870 - ID_B1 SINE B4 -11 213 2 9 1198 243 297 87 19 chr15 80453144 80453247 -23041727 - MIRb SINE MIR -45 223 114 9 1198 249 159 0 0 chr15 80453296 80453340 -23041634 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 1198 376 331 52 26 chr15 80454352 80454376 -23040598 - YREP_Mm Unknown Unknown -1464 348 190 9 1198 836 169 15 8 chr15 80454376 80454507 -23040467 + ID_B1 SINE B4 80 211 -13 9 1198 288 0 0 0 chr15 80454507 80454539 -23040435 + (CAAAA)n Simple_repeat Simple_repeat 1 32 0 9 1198 377 305 55 55 chr15 80454539 80454570 -23040404 + B4A SINE B4 215 245 -47 9 1198 441 0 0 0 chr15 80454582 80454631 -23040343 + (GGGAGA)n Simple_repeat Simple_repeat 1 49 0 9 1198 252 0 0 0 chr15 80454828 80454856 -23040118 + (GA)n Simple_repeat Simple_repeat 2 29 0 9 1198 291 304 19 38 chr15 80454856 80454962 -23040012 + (TATATG)n Simple_repeat Simple_repeat 3 106 0 9 1198 359 315 89 67 chr15 80455074 80455401 -23039573 + RMER17C LTR ERVK 37 370 -40 9 1198 745 260 129 9 chr15 80455389 80455599 -23039375 - B4A SINE B4 -57 235 1 9 1198 441 0 0 0 chr15 80456441 80456490 -23038484 + (CA)n Simple_repeat Simple_repeat 2 50 0 9 1198 1698 176 113 16 chr15 80456994 80457375 -23037599 - MTD LTR MaLR 0 419 2 9 1198 224 372 43 17 chr15 80457444 80457559 -23037415 + L2 LINE L2 2704 2821 -598 9 1198 219 364 73 16 chr15 80458243 80458366 -23036608 + MIRb SINE MIR 2 131 -137 9 1198 293 364 36 0 chr15 80458401 80458566 -23036408 + (CCCCAG)n Simple_repeat Simple_repeat 4 174 0 9 1198 244 336 23 0 chr15 80458534 80458662 -23036312 + (GCCTAA)n Simple_repeat Simple_repeat 3 133 0 9 1198 1240 104 32 11 chr15 80459395 80459580 -23035394 - B2_Mm2 SINE B2 -6 189 1 9 1198 249 33 0 0 chr15 80459708 80459738 -23035236 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 9 1198 651 42 21 10 chr15 80461602 80461698 -23033276 + (TG)n Simple_repeat Simple_repeat 1 97 0 9 1198 722 184 14 35 chr15 80461712 80461853 -23033121 + B1_Mus1 SINE Alu 11 148 0 9 1198 294 295 62 10 chr15 80461932 80462028 -23032946 - MIRc SINE MIR -148 120 20 9 1198 315 0 0 0 chr15 80462078 80462113 -23032861 + (T)n Simple_repeat Simple_repeat 1 35 0 9 1198 1194 75 0 0 chr15 80462113 80462260 -23032714 - B1_Mus1 SINE Alu 0 148 2 9 1198 863 132 16 0 chr15 80462269 80462398 -23032576 + B1_Mur2 SINE Alu 18 148 -1 9 1198 831 250 61 0 chr15 80462415 80462611 -23032363 + ID_B1 SINE B4 2 209 -15 9 1198 191 146 0 24 chr15 80462615 80462657 -23032317 + GA-rich Low_complexity Low_complexity 2 42 0 9 1198 194 91 0 29 chr15 80463526 80463560 -23031414 + (GGGGA)n Simple_repeat Simple_repeat 2 34 0 9 1198 572 190 73 24 chr15 80463919 80464043 -23030931 - B1F SINE Alu -16 133 4 9 1198 468 250 119 15 chr15 80464191 80464209 -23030765 + B1F SINE Alu 2 149 0 9 1198 565 224 78 0 chr15 80464209 80464325 -23030649 + ID_B1 SINE B4 100 224 0 9 1198 403 263 40 10 chr15 80464374 80464474 -23030500 + RSINE1 SINE B4 57 159 -6 9 1198 630 269 130 34 chr15 80466318 80466574 -23028400 - B4 SINE B4 -18 274 4 9 1198 416 345 30 25 chr15 80466574 80466776 -23028198 + L2a LINE L2 3204 3406 -20 9 1198 463 261 8 25 chr15 80466809 80466927 -23028047 + ID_B1 SINE B4 106 221 -3 9 1198 793 194 0 35 chr15 80466934 80467078 -23027896 + B1_Mur3 SINE Alu 2 140 -9 9 1198 1273 108 11 0 chr15 80468388 80468564 -23026410 + B2_Mm1t SINE B2 2 179 -14 9 1198 376 138 0 0 chr15 80468632 80468690 -23026284 + B2_Mm2 SINE B2 47 104 -91 9 1198 225 0 0 0 chr15 80468713 80468738 -23026236 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 9 1198 732 221 7 7 chr15 80469159 80469300 -23025674 + B1_Mur2 SINE Alu 9 149 0 9 1198 306 0 0 0 chr15 80470127 80470161 -23024813 + (TA)n Simple_repeat Simple_repeat 2 35 0 9 1198 465 76 0 0 chr15 80470161 80470227 -23024747 + (TG)n Simple_repeat Simple_repeat 1 66 0 9 1198 509 268 9 9 chr15 80470255 80470368 -23024606 - RSINE1 SINE B4 -31 134 22 9 1198 1904 161 88 0 chr15 80470368 80470721 -23024253 - ORR1C2 LTR MaLR 0 384 1 9 1198 676 219 225 0 chr15 80470904 80471073 -23023901 - B3 SINE B2 -9 207 1 9 1198 629 211 126 60 chr15 80472647 80472829 -23022145 + B3A SINE B2 5 198 0 9 1198 580 270 24 8 chr15 80472903 80473030 -23021944 - RSINE1 SINE B4 -35 130 2 9 1198 1771 133 111 32 chr15 80473141 80473330 -23021644 - RMER17C LTR ERVK 0 410 224 9 1198 789 58 0 0 chr15 80473330 80473433 -23021541 + (GA)n Simple_repeat Simple_repeat 2 104 0 9 1198 1771 133 111 32 chr15 80473433 80473623 -23021351 - RMER17C LTR ERVK -187 223 1 9 1198 293 297 59 59 chr15 80473836 80473972 -23021002 + RMER15 LTR ERVL 438 573 -2 9 1198 396 0 0 0 chr15 80474304 80474348 -23020626 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 1198 312 48 0 0 chr15 80474351 80474393 -23020581 + (GAAAA)n Simple_repeat Simple_repeat 2 43 0 9 1198 227 216 130 102 chr15 80474425 80474533 -23020441 + MIRb SINE MIR 46 156 -112 9 1198 696 260 46 11 chr15 80474908 80475083 -23019891 + B3A SINE B2 2 182 -16 9 1198 517 206 65 3 chr15 80475110 80475253 -23019721 + PB1D10 SINE Alu 1 147 -2 9 1198 255 283 31 12 chr15 80476822 80476914 -23018060 + B4A SINE B4 174 272 -20 9 1198 523 0 30 0 chr15 80476923 80476990 -23017984 + (CA)n Simple_repeat Simple_repeat 1 69 0 9 1198 248 348 95 41 chr15 80477186 80477480 -23017494 + L2c LINE L2 2910 3219 -168 9 1198 675 254 22 0 chr15 80477544 80477682 -23017292 + B1F SINE Alu 1 141 -8 9 1198 749 280 101 11 chr15 80477700 80477967 -23017007 + B4A SINE B4 2 292 0 9 1198 267 103 0 0 chr15 80477975 80478014 -23016960 + (TGG)n Simple_repeat Simple_repeat 1 39 0 9 1199 299 280 13 0 chr15 80478557 80478632 -23016342 + ID4 SINE ID 2 77 -6 9 1199 414 0 0 0 chr15 80480305 80480351 -23014623 + (TG)n Simple_repeat Simple_repeat 2 47 0 9 1199 180 0 0 0 chr15 80481487 80481507 -23013467 + (TC)n Simple_repeat Simple_repeat 2 21 0 9 1199 183 258 76 0 chr15 80481569 80481635 -23013339 - L3 LINE CR1 -3686 803 733 9 1199 293 257 193 0 chr15 80481707 80481816 -23013158 - MER5A1 DNA MER1_type 0 166 37 9 1199 249 272 44 88 chr15 80482854 80482967 -23012007 + L2c LINE L2 3278 3385 -2 9 1199 1979 213 93 66 chr15 80483033 80483560 -23011414 + RMER15 LTR ERVL 21 561 -14 9 1199 250 311 54 78 chr15 80484623 80484715 -23010259 + MER3 DNA MER1_type 23 117 -92 9 1199 918 175 22 11 chr15 80484715 80484894 -23010080 - B2_Mm2 SINE B2 -10 185 5 9 1199 250 311 54 78 chr15 80484894 80484930 -23010044 + MER3 DNA MER1_type 118 148 -61 9 1199 453 262 139 0 chr15 80484932 80485054 -23009920 - ID_B1 SINE B4 -5 219 81 9 1199 234 293 110 0 chr15 80485351 80485433 -23009541 - MER63B DNA AcHobo -8 428 338 9 1199 25 0 0 0 chr15 80485556 80485581 -23009393 + AT_rich Low_complexity Low_complexity 1 25 0 9 1199 854 263 19 14 chr15 80485753 80485965 -23009009 + ID_B1 SINE B4 3 215 -9 9 1199 339 25 0 0 chr15 80485966 80486006 -23008968 + (GA)n Simple_repeat Simple_repeat 1 40 0 9 1199 22 35 0 0 chr15 80486072 80486101 -23008873 + AT_rich Low_complexity Low_complexity 1 29 0 9 1199 639 235 259 0 chr15 80486131 80486297 -23008677 - B3 SINE B2 -7 209 1 9 1199 26 0 0 0 chr15 80486344 80486370 -23008604 + AT_rich Low_complexity Low_complexity 1 26 0 9 1199 538 302 110 25 chr15 80486370 80486771 -23008203 + L1MC1 LINE L1 5329 5763 -570 9 1199 387 179 46 35 chr15 80486852 80486939 -23008035 + ORR1A3-int LTR MaLR 553 640 -1323 9 1199 237 252 33 83 chr15 80486948 80486977 -23007997 + ORR1A3-int LTR MaLR 591 613 -1350 9 1199 940 0 0 0 chr15 80486977 80487082 -23007892 + MT2_Mm LTR ERVL 1 105 -388 9 1199 251 253 139 0 chr15 80487321 80487400 -23007574 + PB1D9 SINE Alu 29 118 -2 9 1199 652 333 14 5 chr15 80487410 80487624 -23007350 - ID_B1 SINE B4 -1 223 8 9 1199 206 194 0 31 chr15 80487685 80487749 -23007225 + T-rich Low_complexity Low_complexity 4 65 0 9 1199 807 120 24 8 chr15 80487751 80487877 -23007097 - B1_Mus2 SINE Alu 0 147 20 9 1199 288 70 0 0 chr15 80487879 80487922 -23007052 + (GTTTG)n Simple_repeat Simple_repeat 2 44 0 9 1199 441 250 0 57 chr15 80487945 80488051 -23006923 + B1_Mur1 SINE Alu 48 147 -2 9 1199 338 281 204 50 chr15 80488084 80488437 -23006537 + L1MC1 LINE L1 5962 6333 0 9 1199 207 0 0 0 chr15 80488711 80488734 -23006240 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 9 1199 253 312 0 59 chr15 80489825 80489910 -23005064 + MIRc SINE MIR 64 143 -125 9 1199 742 191 21 7 chr15 80490171 80490313 -23004661 - B1_Mur1 SINE Alu -1 148 5 9 1199 318 291 13 0 chr15 80490419 80490498 -23004476 - ID4 SINE ID 0 83 4 9 1199 180 0 0 0 chr15 80490518 80490538 -23004436 + (TTG)n Simple_repeat Simple_repeat 2 21 0 9 1199 963 101 0 28 chr15 80490538 80490681 -23004293 - B1_Mur4 SINE Alu -11 139 1 9 1199 326 265 15 51 chr15 80491517 80491617 -23003357 + PB1D7 SINE Alu 2 97 -20 9 1199 198 0 0 0 chr15 80492067 80492089 -23002885 + (TTAG)n Simple_repeat Simple_repeat 3 24 0 9 1199 900 137 0 8 chr15 80492090 80492222 -23002752 - B1_Mm SINE Alu -8 139 9 9 1199 450 333 44 28 chr15 80492499 80492576 -23002398 + ID SINE ID 3 82 -142 9 1199 328 303 52 22 chr15 80492576 80492711 -23002263 + B1_Mus2 SINE Alu 1 139 -8 1 1199 1415 237 64 61 chr15 80493022 80493259 -23001715 - MTEb LTR MaLR 0 379 162 1 1199 1181 62 0 33 chr15 80493259 80493443 -23001531 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 1 1199 1415 237 64 61 chr15 80493443 80493582 -23001392 - MTEb LTR MaLR -218 161 2 1 1199 1062 161 133 20 chr15 80493782 80493985 -23000989 + URR1A DNA MER1_type 1 226 0 1 1199 327 305 99 76 chr15 80494305 80494619 -23000355 - MER31A LTR ERV1 0 466 133 1 1199 285 200 16 16 chr15 80495759 80495820 -22999154 - tRNA-Ala-GCA tRNA tRNA -13 62 2 1 1199 234 300 9 107 chr15 80495846 80495958 -22999016 + LTR80A LTR ERVL 402 502 -81 1 1199 2650 109 74 24 chr15 80496251 80496712 -22998262 + RMER1B Other Other 583 1066 0 1 1199 299 316 23 26 chr15 80496831 80496956 -22998018 + MIRb SINE MIR 7 132 -144 1 1199 418 202 0 88 chr15 80497143 80497268 -22997706 + PB1D10 SINE Alu 3 116 -1 1 1199 1900 254 70 71 chr15 80497441 80497680 -22997294 - ORR1D2-int LTR MaLR -966 614 368 1 1199 672 251 71 15 chr15 80497680 80497878 -22997096 + B3 SINE B2 4 212 -4 1 1199 1900 239 53 70 chr15 80497878 80498222 -22996752 - ORR1D2-int LTR MaLR -1003 367 12 1 1199 2969 79 47 0 chr15 80498222 80498625 -22996349 - BGLII_Mus LTR ERVK 0 422 1 1 1199 1900 239 53 70 chr15 80498625 80498637 -22996337 - ORR1D2-int LTR MaLR -1359 11 2 1 1199 1125 266 14 40 chr15 80498638 80498916 -22996058 - ORR1D2 LTR MaLR 0 370 100 1 1199 999 229 82 188 chr15 80498922 80499138 -22995836 + ORR1D2 LTR MaLR 1 146 -224 1 1199 2393 32 0 0 chr15 80499138 80499415 -22995559 - L1Md_A LINE L1 -2 6580 6304 1 1199 999 229 82 188 chr15 80499415 80499602 -22995372 + ORR1D2 LTR MaLR 147 361 -9 1 1199 481 230 44 123 chr15 80499607 80499721 -22995253 - ORR1D2 LTR MaLR -269 105 1 1 1199 500 216 0 11 chr15 80499721 80499810 -22995164 - B1F SINE Alu -59 90 3 1 1199 539 276 67 45 chr15 80499810 80499979 -22994995 + ID_B1 SINE B4 51 223 -1 1 1199 475 220 64 0 chr15 80500096 80500205 -22994769 - PB1D10 SINE Alu -1 116 1 1 1199 26 0 0 0 chr15 80500524 80500550 -22994424 + AT_rich Low_complexity Low_complexity 1 26 0 2 1199 746 232 126 11 chr15 80500551 80500734 -22994240 - B3 SINE B2 -12 204 1 3 1199 286 236 27 14 chr15 80500773 80500846 -22994128 + ID SINE ID 1 74 -150 4 1199 972 156 0 0 chr15 80500854 80501034 -22993940 + GA-rich Low_complexity Low_complexity 1 180 0 5 1199 434 178 55 0 chr15 80501203 80501276 -22993698 + MIR3 SINE MIR 111 187 -21 6 1199 23 54 0 0 chr15 80502170 80502207 -22992767 + GC_rich Low_complexity Low_complexity 1 37 0 7 1199 480 281 33 33 chr15 80503760 80503911 -22991063 - RSINE1 SINE B4 0 165 15 8 1199 315 0 0 0 chr15 80504238 80504273 -22990701 + (CA)n Simple_repeat Simple_repeat 2 36 0 9 1199 333 0 0 0 chr15 80504427 80504464 -22990510 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1199 259 204 20 0 chr15 80504468 80504517 -22990457 - RSINE1 SINE B4 -41 124 75 1 1199 22 0 0 0 chr15 80504544 80504566 -22990408 + AT_rich Low_complexity Low_complexity 1 22 0 1 1199 211 147 29 0 chr15 80504671 80504705 -22990269 - MIRc SINE MIR -119 149 115 1 1199 1274 53 6 23 chr15 80504839 80505014 -22989960 - B2_Mm2 SINE B2 -23 172 1 1 1199 181 280 129 78 chr15 80505018 80505134 -22989840 - MIRb SINE MIR -146 122 1 1 1199 314 292 73 51 chr15 80505660 80505797 -22989177 - MIRc SINE MIR -127 141 2 1 1199 255 286 102 0 chr15 80505979 80506077 -22988897 - MIR SINE MIR -63 199 92 1 1199 867 81 16 0 chr15 80506156 80506280 -22988694 + B1_Mus2 SINE Alu 21 146 -1 1 1199 180 289 155 17 chr15 80506806 80506922 -22988052 - L4 LINE RTE -1718 311 180 1 1199 729 312 45 22 chr15 80507533 80507802 -22987172 + B4A SINE B4 8 282 -10 2 1199 424 240 137 24 chr15 80508003 80508127 -22986847 - B1F1 SINE Alu -7 142 5 2 1199 246 267 110 55 chr15 80509106 80509233 -22985741 - RLTR4_Mm LTR ERV1 -161 581 448 2 1199 350 294 49 0 chr15 80509436 80509538 -22985436 + MIRc SINE MIR 90 196 -72 2 1199 245 295 25 13 chr15 80510839 80510918 -22984056 - ID2 SINE ID -2 81 2 2 1199 251 272 135 42 chr15 80510959 80511055 -22983919 - MIRb SINE MIR -118 150 46 2 1199 196 206 172 16 chr15 80512862 80512926 -22982048 - MIRc SINE MIR -116 152 79 2 1199 256 270 103 26 chr15 80514968 80515083 -22979891 - L2c LINE L2 -25 3362 3210 2 1199 26 50 0 0 chr15 80516335 80516375 -22978599 + AT_rich Low_complexity Low_complexity 1 40 0 2 1199 230 274 0 88 chr15 80516921 80516989 -22977985 - RSINE1 SINE B4 -57 108 47 2 1199 483 276 9 0 chr15 80517348 80517464 -22977510 - ID_B1 SINE B4 -17 207 91 3 1199 849 211 10 56 chr15 80517483 80517679 -22977295 + B3A SINE B2 5 191 -7 3 1199 384 289 102 32 chr15 80517970 80518127 -22976847 - L1MD LINE L1 -2803 3343 3176 3 1199 372 305 84 0 chr15 80518151 80518282 -22976692 + MIRb SINE MIR 35 176 -92 3 1199 268 282 0 0 chr15 80518351 80518405 -22976569 - Ricksha_c DNA MuDR -1128 920 867 3 1199 195 129 0 0 chr15 80518405 80518436 -22976538 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 3 1199 268 282 0 0 chr15 80518436 80518452 -22976522 - Ricksha_c DNA MuDR -1182 866 851 3 1199 275 230 68 0 chr15 80518461 80518535 -22976439 - ID_B1 SINE B4 -59 165 87 3 1199 747 284 147 15 chr15 80518562 80518834 -22976140 - MLT2D LTR ERVL -98 316 9 3 1199 274 208 177 25 chr15 80519387 80519466 -22975508 - MIR SINE MIR -35 227 137 3 1199 304 308 212 25 chr15 80519501 80519661 -22975313 - MIRb SINE MIR -5 263 74 3 1199 1995 150 81 6 chr15 80521408 80521756 -22973218 - ORR1D1 LTR MaLR 0 374 1 4 1199 438 20 0 0 chr15 80524381 80524432 -22970542 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1199 947 261 10 0 chr15 80526471 80526678 -22968296 - B3 SINE B2 -6 210 2 4 1199 230 315 120 23 chr15 80526901 80527034 -22967940 - L2a LINE L2 -222 3204 3059 4 1199 754 97 153 0 chr15 80527271 80527395 -22967579 - B1_Mur3 SINE Alu -1 148 6 4 1199 1206 61 0 7 chr15 80527720 80527868 -22967106 + B1_Mm SINE Alu 1 147 0 4 1199 180 0 0 0 chr15 80527868 80527888 -22967086 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1199 1864 142 61 17 chr15 80530980 80531324 -22963650 + RLTR15 LTR ERVK 1 359 0 4 1199 333 279 81 46 chr15 80531451 80531667 -22963307 - RLTR15 LTR ERVK -279 249 48 4 1199 333 210 136 0 chr15 80532035 80532116 -22962858 - B1F1 SINE Alu -57 92 1 4 1199 484 285 34 97 chr15 80533028 80533203 -22961771 + RSINE1 SINE B4 2 165 0 5 1199 952 137 14 7 chr15 80533775 80533922 -22961052 + B1_Mur4 SINE Alu 1 148 -2 5 1199 1679 26 0 15 chr15 80534430 80534626 -22960348 + B2_Mm1a SINE B2 1 193 0 5 1199 206 283 0 0 chr15 80534735 80534795 -22960179 + C-rich Low_complexity Low_complexity 2 61 0 5 1199 296 284 120 56 chr15 80535029 80535137 -22959837 + PB1D10 SINE Alu 3 117 0 5 1199 372 312 133 20 chr15 80535144 80535340 -22959634 - MER58B DNA MER1_type -44 297 80 5 1199 636 263 57 0 chr15 80535336 80535511 -22959463 + B3A SINE B2 10 194 -4 5 1199 314 295 10 21 chr15 80535552 80535649 -22959325 + MER45A DNA Tip100 74 169 -9 5 1199 686 222 200 27 chr15 80535693 80535878 -22959096 + ID_B1 SINE B4 2 218 -6 5 1199 609 14 0 0 chr15 80535880 80535950 -22959024 + (GAA)n Simple_repeat Simple_repeat 1 70 0 5 1199 284 219 15 45 chr15 80535952 80536019 -22958955 + ID_B1 SINE B4 147 211 -13 6 1199 1240 68 0 0 chr15 80536025 80536173 -22958801 - B1_Mus1 SINE Alu 0 148 1 6 1199 231 259 241 35 chr15 80536891 80537007 -22957967 + MIR SINE MIR 7 146 -116 6 1199 308 264 102 11 chr15 80538496 80538584 -22956390 - PB1D10 SINE Alu 0 117 22 6 1199 347 118 30 34 chr15 80538593 80538698 -22956276 - B2_Mm2 SINE B2 -3 192 47 6 1199 1086 120 6 12 chr15 80538744 80538904 -22956070 - B2_Mm1t SINE B2 -33 160 2 6 1199 600 318 15 30 chr15 80539501 80539653 -22955321 + B3A SINE B2 1 150 -48 6 1199 270 0 0 0 chr15 80539653 80539683 -22955291 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1199 600 303 31 76 chr15 80539683 80539755 -22955219 + B3A SINE B2 147 215 -1 6 1199 279 287 58 29 chr15 80540819 80540923 -22954051 + MIRb SINE MIR 42 148 -120 6 1199 23 54 0 0 chr15 80542150 80542187 -22952787 + GC_rich Low_complexity Low_complexity 1 37 0 6 1199 234 0 0 0 chr15 80543191 80543217 -22951757 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 7 1199 652 143 35 26 chr15 80543217 80543332 -22951642 - B1_Mur1 SINE Alu -11 138 23 7 1199 1276 21 7 0 chr15 80543523 80543668 -22951306 - B1_Mm SINE Alu 0 147 2 7 1199 350 287 11 0 chr15 80544222 80544309 -22950665 - PB1D10 SINE Alu -19 98 11 7 1199 618 193 102 15 chr15 80544351 80544488 -22950486 - B1F SINE Alu 0 149 1 7 1199 241 281 22 33 chr15 80544595 80544687 -22950287 + L2a LINE L2 3336 3426 0 7 1199 962 223 24 77 chr15 80545204 80545544 -22949430 - MER33 DNA MER1_type -2 322 1 7 1199 240 35 0 0 chr15 80545739 80545768 -22949206 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 1199 466 215 86 71 chr15 80545781 80545921 -22949053 - B3A SINE B2 -54 144 3 7 1199 406 286 9 0 chr15 80545950 80546055 -22948919 - PB1 SINE Alu 0 127 22 7 1199 850 185 0 33 chr15 80546386 80546537 -22948437 - B1_Mus2 SINE Alu 0 147 2 8 1199 245 304 0 102 chr15 80546622 80546710 -22948264 - ID4_ SINE ID -3 80 2 8 1199 745 229 21 7 chr15 80546865 80547010 -22947964 + B1_Mur2 SINE Alu 3 149 0 8 1199 948 135 14 0 chr15 80547047 80547188 -22947786 + B1_Mur4 SINE Alu 1 143 -7 8 1199 694 292 76 22 chr15 80547207 80547483 -22947491 + B4A SINE B4 2 292 0 8 1199 446 228 133 57 chr15 80547543 80547701 -22947273 + MT2B LTR ERVL 94 263 -338 8 1199 896 124 14 7 chr15 80547603 80547741 -22947233 + B1F2 SINE Alu 10 148 -1 8 1199 231 280 100 79 chr15 80547606 80547796 -22947178 - YREP_Mm Unknown Unknown -1506 306 113 8 1199 401 198 113 10 chr15 80547802 80547899 -22947075 + PB1D7 SINE Alu 3 109 -11 8 1199 284 311 64 28 chr15 80547909 80548018 -22946956 - MARNA DNA Mariner -337 249 137 8 1199 22 0 0 0 chr15 80548335 80548357 -22946617 + AT_rich Low_complexity Low_complexity 1 22 0 9 1199 422 304 12 64 chr15 80548363 80548535 -22946439 - RSINE1 SINE B4 0 165 3 9 1199 380 260 65 0 chr15 80548668 80548745 -22946229 + ID_B1 SINE B4 11 92 -132 9 1199 616 257 158 0 chr15 80548745 80548928 -22946046 + B3 SINE B2 1 212 -4 9 1199 247 263 10 34 chr15 80548977 80549074 -22945900 + B1_Mur3 SINE Alu 3 94 -53 9 1199 606 88 4 30 chr15 80549228 80549316 -22945658 + B1_Mm SINE Alu 24 137 -10 9 1199 231 36 0 0 chr15 80549316 80549344 -22945630 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 9 1199 1812 151 123 3 chr15 80549482 80549807 -22945167 - RMER15 LTR ERVL -5 570 207 9 1199 276 200 0 0 chr15 80549837 80549897 -22945077 + CT-rich Low_complexity Low_complexity 4 63 0 9 1199 419 194 184 0 chr15 80549951 80550054 -22944920 - RSINE1 SINE B4 -33 132 11 9 1199 437 269 56 0 chr15 80550063 80550171 -22944803 - PB1D10 SINE Alu -1 116 3 1 1199 21 57 0 0 chr15 80550182 80550217 -22944757 + AT_rich Low_complexity Low_complexity 1 35 0 1 1199 909 267 15 0 chr15 80550219 80550425 -22944549 - B3 SINE B2 -6 210 2 1 1199 244 231 39 0 chr15 80550442 80550494 -22944480 - ID SINE ID -151 73 20 1 1199 974 215 10 56 chr15 80550513 80550710 -22944264 - B3A SINE B2 -10 188 1 1 1199 231 88 0 0 chr15 80551268 80551302 -22943672 + (GGAAA)n Simple_repeat Simple_repeat 3 36 0 1 1199 245 299 0 56 chr15 80551310 80551381 -22943593 + ID SINE ID 21 87 -137 1 1199 880 153 28 0 chr15 80551616 80551760 -22943214 + B1_Mur3 SINE Alu 1 148 -1 1 1199 22 0 0 0 chr15 80552158 80552180 -22942794 + AT_rich Low_complexity Low_complexity 1 22 0 1 1199 910 243 104 0 chr15 80552198 80552449 -22942525 + B4A SINE B4 4 280 -12 1 1199 369 0 0 0 chr15 80553007 80553048 -22941926 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1199 409 300 71 0 chr15 80553116 80553256 -22941718 + Tigger11a DNA MER2_type 300 449 -286 1 1199 370 248 25 9 chr15 80553616 80553721 -22941253 - PB1D10 SINE Alu -8 119 5 1 1199 804 260 120 58 chr15 80554132 80554406 -22940568 + B4A SINE B4 2 292 0 1 1199 296 48 0 23 chr15 80554508 80554551 -22940423 + (TTA)n Simple_repeat Simple_repeat 1 42 0 1 1199 269 311 14 0 chr15 80554749 80554823 -22940151 - ID4_ SINE ID 0 83 9 1 1199 308 256 0 36 chr15 80554841 80554979 -22939995 + CT-rich Low_complexity Low_complexity 6 138 0 1 1199 743 138 99 8 chr15 80554980 80555111 -22939863 - B1_Mur3 SINE Alu -6 143 1 1 1199 342 0 0 0 chr15 80555143 80555181 -22939793 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1199 544 316 18 72 chr15 80555184 80555351 -22939623 - B3A SINE B2 -38 160 3 1 1199 806 228 80 15 chr15 80555513 80555713 -22939261 - B3 SINE B2 -3 213 1 1 1199 26 0 0 0 chr15 80555718 80555744 -22939230 + AT_rich Low_complexity Low_complexity 1 26 0 1 1199 462 240 10 0 chr15 80555759 80555855 -22939119 + RSINE1 SINE B4 22 118 -47 1 1199 773 197 7 0 chr15 80555909 80556046 -22938928 + B1_Mus1 SINE Alu 3 140 -8 1 1199 290 225 57 59 chr15 80556081 80556226 -22938748 - L1M2 LINE L1 -1978 4162 4029 1 1199 431 257 0 38 chr15 80556263 80556368 -22938606 - ID_B1 SINE B4 -8 216 116 1 1199 253 332 122 0 chr15 80556467 80556681 -22938293 - L1M4 LINE L1 -2575 3571 3332 1 1199 650 280 16 21 chr15 80556698 80556888 -22938086 - B3A SINE B2 0 198 10 1 1199 322 269 57 27 chr15 80556901 80557091 -22937883 - L1M4 LINE L1 -2811 3335 3143 1 1199 4019 43 2 0 chr15 80557524 80558009 -22936965 - L1Md_F2 LINE L1 0 6582 6097 1 1199 799 183 34 64 chr15 80558036 80558240 -22936734 - B3A SINE B2 0 198 1 1 1199 404 247 221 12 chr15 80558465 80558817 -22936157 - L1M4 LINE L1 -2960 3186 2764 1 1199 865 169 28 7 chr15 80559158 80559301 -22935673 - B1_Mus1 SINE Alu -1 147 2 1 1199 221 235 26 267 chr15 80559466 80559582 -22935392 + B1_Mur1 SINE Alu 1 88 -61 1 1199 253 208 0 70 chr15 80559530 80559587 -22935387 + MT2B LTR ERVL 191 243 -358 1 1199 601 58 12 0 chr15 80559568 80559654 -22935320 - B1_Mus1 SINE Alu -61 87 1 1 1199 377 136 22 90 chr15 80559574 80559663 -22935311 - MT2B LTR ERVL -365 236 154 1 1199 337 252 24 144 chr15 80559662 80559829 -22935145 - MER46C DNA MER2_type -188 150 4 1 1199 256 253 38 12 chr15 80560198 80560278 -22934696 + ID4_ SINE ID 2 83 0 1 1199 591 195 16 25 chr15 80560357 80560478 -22934496 - PB1D9 SINE Alu 0 120 1 1 1199 379 214 79 0 chr15 80560592 80560681 -22934293 + PB1D9 SINE Alu 25 120 0 1 1199 848 224 71 5 chr15 80560688 80560885 -22934089 - B3 SINE B2 -6 210 1 1 1199 486 0 0 0 chr15 80560922 80560976 -22933998 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 1199 606 232 50 14 chr15 80561007 80561147 -22933827 - RSINE1 SINE B4 -18 147 3 1 1199 231 329 0 38 chr15 80561304 80561317 -22933657 - ID4_ SINE ID -2 81 7 1 1199 253 250 62 15 chr15 80561317 80561382 -22933592 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 1 1199 240 192 124 57 chr15 80561505 80561610 -22933364 + PB1D10 SINE Alu 6 117 0 1 1199 240 35 0 0 chr15 80561862 80561891 -22933083 + (TAA)n Simple_repeat Simple_repeat 1 29 0 1 1199 880 221 11 6 chr15 80561991 80562168 -22932806 + B3 SINE B2 35 212 -4 1 1199 414 294 51 51 chr15 80562451 80562666 -22932308 + MIRb SINE MIR 53 267 -1 1 1199 233 264 126 16 chr15 80562863 80562990 -22931984 - L2a LINE L2 -12 3414 3274 1 1199 1228 41 0 0 chr15 80563515 80563661 -22931313 - B1_Mus2 SINE Alu 0 147 2 1 1199 806 56 0 0 chr15 80563771 80563879 -22931095 + B1_Mm SINE Alu 40 147 0 1 1199 182 0 0 97 chr15 80563882 80563913 -22931061 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1199 334 322 58 0 chr15 80564042 80564163 -22930811 + ID_B1 SINE B4 88 215 -9 1 1199 219 217 82 55 chr15 80564575 80564648 -22930326 + L2a LINE L2 3351 3425 -1 1 1199 307 247 90 0 chr15 80565017 80565106 -22929868 - PB1D7 SINE Alu -6 114 18 1 1199 561 284 33 56 chr15 80565616 80565829 -22929145 + B4 SINE B4 85 292 0 1 1199 1682 21 0 10 chr15 80566373 80566567 -22928407 + B2_Mm1a SINE B2 2 193 0 1 1199 247 219 16 0 chr15 80566861 80566925 -22928049 - L1MB8 LINE L1 -11 6167 6103 1 1199 962 143 7 0 chr15 80566929 80567069 -22927905 + B1_Mur3 SINE Alu 2 142 -7 1 1199 557 197 62 8 chr15 80567089 80567217 -22927757 - B3 SINE B2 0 216 82 1 1199 234 240 0 107 chr15 80567290 80567374 -22927600 - RMER15 LTR ERVL -154 421 347 1 1199 284 214 57 0 chr15 80567627 80567697 -22927277 - MIR SINE MIR -164 98 25 1 1199 243 0 0 0 chr15 80568020 80568047 -22926927 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1 1199 23 0 0 0 chr15 80568205 80568228 -22926746 + AT_rich Low_complexity Low_complexity 1 23 0 1 1199 271 109 0 30 chr15 80568599 80568633 -22926341 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 1 1199 1199 54 0 0 chr15 80568633 80568780 -22926194 - B1_Mus2 SINE Alu 0 147 1 1 1199 271 109 0 30 chr15 80568780 80568811 -22926163 + (TTTTTA)n Simple_repeat Simple_repeat 3 31 0 1 1199 379 307 28 21 chr15 80568932 80569075 -22925899 - L1MEg LINE L1 -1023 5123 4980 1 1199 653 241 30 1 chr15 80569106 80569294 -22925680 - B3A SINE B2 -9 207 8 1 1199 295 258 0 0 chr15 80569367 80569429 -22925545 - L1MEg LINE L1 -6000 242 181 1 1199 1404 224 129 0 chr15 80570544 80570915 -22924059 - MTD LTR MaLR 0 419 1 1 1199 369 109 0 0 chr15 80571080 80571135 -22923839 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1199 225 0 0 0 chr15 80571149 80571174 -22923800 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1199 1199 62 0 0 chr15 80571174 80571319 -22923655 - B1_Mm SINE Alu 0 147 3 1 1199 540 45 0 0 chr15 80571461 80571528 -22923446 + (TTCTC)n Simple_repeat Simple_repeat 3 69 0 1 1199 550 213 6 28 chr15 80571564 80571743 -22923231 + C-rich Low_complexity Low_complexity 4 178 0 1 1199 662 190 36 7 chr15 80571763 80571901 -22923073 - B1_Mur1 SINE Alu -6 143 2 1 1199 265 279 69 12 chr15 80571905 80572065 -22922909 + Charlie1a DNA MER1_type 1285 1453 -2 1 1199 459 232 35 9 chr15 80572294 80572407 -22922567 + PB1D7 SINE Alu 5 120 0 1 1199 262 286 144 43 chr15 80572425 80572564 -22922410 + ID_B1 SINE B4 9 161 -63 1 1199 288 221 50 59 chr15 80572493 80572594 -22922380 + PB1D10 SINE Alu 12 111 -6 1 1199 341 182 15 0 chr15 80572882 80572948 -22922026 + B1_Mur1 SINE Alu 40 106 -43 1 1199 217 132 0 0 chr15 80573029 80573067 -22921907 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1199 1708 153 83 29 chr15 80573246 80573595 -22921379 - ORR1C1 LTR MaLR -2 376 9 1 1199 343 204 15 212 chr15 80574411 80574548 -22920426 + PB1D10 SINE Alu 38 148 0 1 1199 310 238 108 10 chr15 80574574 80574676 -22920298 + ID_B1 SINE B4 111 222 -2 1 1199 207 0 0 0 chr15 80575424 80575447 -22919527 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1199 283 308 0 0 chr15 80575474 80575552 -22919422 + PB1 SINE Alu 1 78 -49 1 1199 183 339 15 0 chr15 80576112 80576177 -22918797 - L2c LINE L2 -59 3328 3263 1 1199 353 287 11 0 chr15 80577208 80577295 -22917679 + PB1D10 SINE Alu 17 104 -13 1 1199 23 33 0 0 chr15 80577295 80577325 -22917649 + AT_rich Low_complexity Low_complexity 1 30 0 1 1199 218 211 58 0 chr15 80577496 80577548 -22917426 - ID SINE ID -141 83 29 1 1199 236 53 26 0 chr15 80577976 80578014 -22916960 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1199 1169 37 0 0 chr15 80578014 80578148 -22916826 - B1_Mm SINE Alu -10 137 4 1 1199 207 100 0 0 chr15 80578174 80578204 -22916770 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1199 912 221 38 19 chr15 80578226 80578438 -22916536 + B3 SINE B2 1 216 0 1 1199 21 0 0 0 chr15 80578442 80578463 -22916511 + AT_rich Low_complexity Low_complexity 1 21 0 1 1199 251 187 40 0 chr15 80578485 80578543 -22916431 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 1199 207 0 0 0 chr15 80578543 80578566 -22916408 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1199 251 187 40 0 chr15 80578566 80578582 -22916392 + (TA)n Simple_repeat Simple_repeat 2 17 0 1 1199 25 31 0 0 chr15 80578589 80578621 -22916353 + AT_rich Low_complexity Low_complexity 1 32 0 1 1199 538 219 169 8 chr15 80578622 80578746 -22916228 - B1_Mur2 SINE Alu -4 145 2 2 1199 868 190 106 20 chr15 80578748 80578947 -22916027 - B3 SINE B2 0 216 1 2 1199 308 194 149 0 chr15 80579042 80579109 -22915865 + ID4_ SINE ID 1 77 -6 2 1199 298 224 99 19 chr15 80579908 80580037 -22914937 - L1MA6 LINE L1 -29 6271 6131 2 1199 337 272 101 80 chr15 80580037 80580225 -22914749 - B3A SINE B2 -3 192 1 2 1199 474 257 29 22 chr15 80580309 80580448 -22914526 - B3 SINE B2 -7 209 70 2 1199 762 151 49 21 chr15 80580591 80580733 -22914241 - B1_Mus2 SINE Alu -1 146 1 2 1199 291 28 0 0 chr15 80581327 80581363 -22913611 + (GTTTG)n Simple_repeat Simple_repeat 2 37 0 2 1199 709 119 123 31 chr15 80581363 80581493 -22913481 - B1_Mur4 SINE Alu -8 142 1 2 1199 733 245 20 40 chr15 80581727 80581927 -22913047 - B3A SINE B2 -1 197 2 2 1199 587 147 0 19 chr15 80582076 80582180 -22912794 - B1_Mur2 SINE Alu -8 141 40 2 1199 557 310 0 0 chr15 80582227 80582401 -22912573 + (CCTG)n Simple_repeat Simple_repeat 2 175 0 2 1199 251 200 0 0 chr15 80582443 80582488 -22912486 - B1_Mus1 SINE Alu -93 55 11 2 1199 342 298 97 23 chr15 80583159 80583334 -22911640 - LTR79 LTR ERVL -3 524 337 2 1199 626 275 34 0 chr15 80584462 80584611 -22910363 + B3 SINE B2 2 155 -61 2 1199 26 0 0 0 chr15 80584611 80584637 -22910337 + AT_rich Low_complexity Low_complexity 1 26 0 2 1199 242 250 17 0 chr15 80584806 80584866 -22910108 + ID_B1 SINE B4 111 171 -53 2 1199 185 282 63 0 chr15 80585227 80585309 -22909665 - MIRc SINE MIR -91 177 86 2 1199 360 268 72 16 chr15 80585340 80585465 -22909509 + LTR33 LTR ERVL 286 417 -98 2 1199 737 185 173 0 chr15 80585878 80586051 -22908923 + B3 SINE B2 9 211 -5 2 1199 974 204 15 25 chr15 80586093 80586294 -22908680 + B3 SINE B2 1 199 -17 2 1199 652 258 152 15 chr15 80586552 80586749 -22908225 - ID_B1 SINE B4 0 224 1 2 1199 2436 120 14 8 chr15 80587316 80587678 -22907296 + ORR1B2 LTR MaLR 4 367 0 2 1199 789 239 33 19 chr15 80588244 80588457 -22906517 + B3 SINE B2 1 216 0 2 1199 340 276 16 94 chr15 80588522 80588650 -22906324 - ID_B1 SINE B4 -23 201 84 2 1199 441 221 183 0 chr15 80588547 80588651 -22906323 - B1_Mm SINE Alu -23 124 2 2 1199 422 273 62 18 chr15 80588735 80588847 -22906127 - RSINE1 SINE B4 -12 153 37 2 1199 1664 21 0 0 chr15 80588985 80589171 -22905803 + B2_Mm1a SINE B2 2 187 -6 2 1199 2133 148 73 16 chr15 80589194 80589565 -22905409 - ORR1B1 LTR MaLR 0 394 3 2 1199 252 0 0 0 chr15 80590237 80590265 -22904709 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 1199 260 308 0 0 chr15 80590269 80590334 -22904640 - ID4_ SINE ID -17 66 2 2 1199 524 276 30 0 chr15 80590668 80590802 -22904172 + B1F1 SINE Alu 12 149 0 2 1199 907 241 0 0 chr15 80591050 80591241 -22903733 - B3 SINE B2 -23 193 3 2 1199 243 222 0 0 chr15 80591917 80591962 -22903012 + B4A SINE B4 8 52 -240 2 1199 218 277 15 0 chr15 80592019 80592084 -22902890 - B4 SINE B4 -209 83 18 2 1199 22 0 0 0 chr15 80592084 80592106 -22902868 + AT_rich Low_complexity Low_complexity 1 22 0 2 1199 508 235 58 36 chr15 80592124 80592261 -22902713 + B1F SINE Alu 10 149 0 2 1199 227 207 238 24 chr15 80592308 80592392 -22902582 + PB1 SINE Alu 21 122 -5 2 1199 28 0 0 0 chr15 80592481 80592509 -22902465 + AT_rich Low_complexity Low_complexity 1 28 0 2 1199 231 236 87 43 chr15 80592572 80592687 -22902287 + L1MC5 LINE L1 7798 7917 -44 2 1199 784 189 165 11 chr15 80592739 80592921 -22902053 - B3 SINE B2 -6 210 1 2 1199 760 173 29 0 chr15 80592924 80593063 -22901911 - B1_Mus1 SINE Alu 0 148 6 2 1199 318 317 81 32 chr15 80593784 80593908 -22901066 - RSINE1 SINE B4 -8 157 28 2 1199 646 118 18 0 chr15 80593948 80594058 -22900916 - B1_Mus2 SINE Alu -2 145 34 2 1199 251 185 37 0 chr15 80594133 80594187 -22900787 - L2a LINE L2 -8 3418 3363 2 1199 1347 236 142 17 chr15 80595244 80595801 -22899173 + L1MC3 LINE L1 7085 7770 -15 2 1199 519 278 146 53 chr15 80595859 80596252 -22898722 - MLT1G1 LTR MaLR -96 483 72 2 1199 248 244 72 12 chr15 80596468 80596551 -22898423 + MT2B2 LTR ERVL 154 241 -343 2 1199 383 270 90 0 chr15 80596484 80596584 -22898390 + PB1D10 SINE Alu 8 116 -1 2 1199 608 260 0 0 chr15 80596762 80596889 -22898085 - RSINE1 SINE B4 -36 129 3 2 1199 836 169 49 0 chr15 80596953 80597095 -22897879 - B1_Mur4 SINE Alu -1 149 1 2 1199 486 213 108 27 chr15 80597100 80597211 -22897763 - B1_Mur1 SINE Alu -7 142 23 2 1199 1409 73 21 10 chr15 80597231 80597424 -22897550 - B2_Mm2 SINE B2 0 195 1 2 1199 223 329 39 13 chr15 80597509 80597586 -22897388 - ID4 SINE ID 0 83 5 2 1199 243 197 66 0 chr15 80597605 80597666 -22897308 - PB1D10 SINE Alu -8 109 45 2 1199 299 200 30 15 chr15 80597906 80597972 -22897002 - MTD LTR MaLR -77 342 276 2 1199 273 177 0 0 chr15 80597974 80598027 -22896947 + ERVL-B4-int LTR ERVL 4451 4497 -1217 2 1199 374 288 129 18 chr15 80598027 80598197 -22896777 - MTD LTR MaLR -155 264 76 2 1199 1720 112 4 11 chr15 80598203 80598466 -22896508 - ORR1A2 LTR MaLR -8 319 59 2 1199 449 220 159 28 chr15 80599216 80599361 -22895613 + RSINE1 SINE B4 2 165 0 2 1199 738 248 88 137 chr15 80599404 80599887 -22895087 + L1MB3 LINE L1 5603 6093 -81 2 1199 1145 64 0 0 chr15 80600196 80600336 -22894638 + B1_Mus1 SINE Alu 1 140 -8 2 1199 234 330 67 17 chr15 80600609 80600788 -22894186 + HAL1 LINE L1 2050 2237 -270 2 1199 755 238 69 5 chr15 80600987 80601190 -22893784 + B3 SINE B2 1 216 0 2 1199 706 181 247 17 chr15 80601221 80601395 -22893579 + B3 SINE B2 3 216 0 2 1199 214 205 0 0 chr15 80601407 80601446 -22893528 + PB1D10 SINE Alu 13 51 -66 2 1199 21 0 0 0 chr15 80601478 80601499 -22893475 + AT_rich Low_complexity Low_complexity 1 21 0 2 1199 431 321 105 23 chr15 80601694 80601952 -22893022 + RCHARR1 DNA MER1_type 50 328 -646 2 1199 701 179 111 7 chr15 80602954 80603089 -22891885 + B1_Mur4 SINE Alu 2 150 0 2 1199 457 320 72 43 chr15 80603120 80603398 -22891576 + B4A SINE B4 3 288 -4 2 1199 257 0 30 0 chr15 80603722 80603755 -22891219 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1199 546 182 0 29 chr15 80603964 80604066 -22890908 - B1F1 SINE Alu 0 149 51 2 1199 3226 118 97 4 chr15 80604100 80604636 -22890338 + MT2B LTR ERVL 1 586 -15 2 1199 524 272 8 8 chr15 80604651 80604777 -22890197 - RSINE1 SINE B4 -10 155 30 2 1199 1898 156 41 160 chr15 80604886 80605374 -22889600 - RLTR23 LTR ERV1 0 430 1 2 1199 566 300 45 16 chr15 80605536 80605780 -22889194 - MuRRS4-int LTR ERV1 -269 4794 4569 2 1199 1368 71 22 5 chr15 80605780 80605964 -22889010 + B2_Mm2 SINE B2 1 187 -8 2 1199 1431 333 83 71 chr15 80607212 80609058 -22885916 - RLTR6-int LTR ERV1 -2009 5592 3729 2 1199 180 0 0 0 chr15 80609058 80609078 -22885896 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 2 149 1431 328 84 73 chr15 80609078 80609859 -22885115 - RLTR6-int LTR ERV1 -3908 3870 3051 2 1200 492 300 42 46 chr15 80610127 80610437 -22884537 - MuRRS4-int LTR ERV1 -3141 1549 1216 2 1200 207 88 0 0 chr15 80610441 80610475 -22884499 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 2 1200 1238 41 7 0 chr15 80610477 80610624 -22884350 - B1_Mus1 SINE Alu 0 148 1 2 1200 313 255 60 54 chr15 80610625 80610774 -22884200 - MURVY-int LTR ERV1 -6188 1368 1156 2 1200 1793 139 91 141 chr15 80611723 80612176 -22882798 - RLTR23 LTR ERV1 0 430 1 2 1200 657 271 89 11 chr15 80612201 80612391 -22882583 - B3 SINE B2 0 216 12 2 1200 510 143 0 0 chr15 80612579 80612670 -22882304 + (TA)n Simple_repeat Simple_repeat 2 92 0 2 1200 1337 55 76 22 chr15 80612675 80612859 -22882115 - B2_Mm2 SINE B2 0 195 2 2 1200 1429 63 10 5 chr15 80613106 80613298 -22881676 + B2_Mm1t SINE B2 1 193 0 2 1200 906 219 5 5 chr15 80613298 80613486 -22881488 + B3 SINE B2 29 216 0 2 1200 318 183 0 16 chr15 80613505 80613566 -22881408 + PB1D10 SINE Alu 43 102 -15 2 1200 360 244 62 39 chr15 80613774 80613902 -22881072 + MER2 DNA MER2_type 71 201 -144 2 1200 495 289 22 22 chr15 80613904 80614042 -22880932 + ID_B1 SINE B4 84 221 -3 2 1200 591 233 0 30 chr15 80614048 80614181 -22880793 + RSINE1 SINE B4 3 131 -34 2 1200 226 188 21 0 chr15 80614181 80614229 -22880745 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1200 334 317 87 0 chr15 80614278 80614382 -22880592 + MER2 DNA MER2_type 230 342 -3 2 1200 753 273 103 26 chr15 80614604 80615002 -22879972 - L1MD LINE L1 -584 5656 5208 2 1200 208 139 0 0 chr15 80616549 80616585 -22878389 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1200 1367 168 0 0 chr15 80616595 80616803 -22878171 - B3 SINE B2 -7 209 2 2 1200 347 308 52 88 chr15 80616963 80617212 -22877762 - Tigger11a DNA MER2_type -30 705 466 2 1200 296 266 0 0 chr15 80617627 80617691 -22877283 - ID4 SINE ID -1 82 19 2 1200 1255 199 99 25 chr15 80617695 80618019 -22876955 - MTEa LTR MaLR -23 356 9 2 1200 225 242 167 0 chr15 80618129 80618195 -22876779 + B1_Mus2 SINE Alu 2 78 -69 2 1200 482 244 158 28 chr15 80618649 80618826 -22876148 + ID_B1 SINE B4 24 223 -1 2 1200 1572 38 0 0 chr15 80618886 80619071 -22875903 - L1Md_A LINE L1 -477 6105 5921 3 1200 4142 36 0 0 chr15 80619071 80619549 -22875425 + L1Md_A LINE L1 6104 6581 -1 3 1200 324 277 77 42 chr15 80619573 80619716 -22875258 + RSINE1 SINE B4 18 165 0 3 1200 535 211 156 0 chr15 80619961 80620089 -22874885 + B1_Mur2 SINE Alu 1 148 -1 3 1200 264 170 0 0 chr15 80620098 80620151 -22874823 + A-rich Low_complexity Low_complexity 3 55 0 3 1200 514 301 59 24 chr15 80620467 80620637 -22874337 + ID_B1 SINE B4 1 176 -116 3 1200 289 109 36 0 chr15 80620648 80620703 -22874271 + (GA)n Simple_repeat Simple_repeat 1 57 0 3 1200 186 43 0 0 chr15 80620769 80620792 -22874182 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 3 1200 4886 47 7 3 chr15 80620796 80621392 -22873582 - L1Md_F2 LINE L1 0 6582 5985 3 1200 309 51 0 0 chr15 80621455 80621494 -22873480 + (ATTG)n Simple_repeat Simple_repeat 4 42 0 3 1200 219 226 111 16 chr15 80621502 80621565 -22873409 - B2_Mm2 SINE B2 -122 73 5 3 1200 21 71 0 0 chr15 80621840 80621882 -22873092 + AT_rich Low_complexity Low_complexity 1 42 0 3 1200 290 259 136 11 chr15 80621900 80622076 -22872898 + L1M3 LINE L1 4777 4974 -1166 3 1200 3665 282 30 24 chr15 80622293 80623346 -22871628 - Lx8 LINE L1 -156 7317 6258 3 1200 783 152 14 0 chr15 80623355 80623565 -22871409 + CT-rich Low_complexity Low_complexity 1 213 0 3 1200 852 131 15 0 chr15 80623565 80623702 -22871272 - B1_Mus2 SINE Alu 0 147 9 3 1200 232 318 57 0 chr15 80623704 80623792 -22871182 - Lx8 LINE L1 -1188 6285 6193 3 1200 1071 235 5 0 chr15 80623893 80624097 -22870877 - B3 SINE B2 -10 206 2 3 1200 1049 138 189 5 chr15 80624398 80624588 -22870386 - URR1B DNA MER1_type 0 225 1 3 1200 306 285 54 54 chr15 80624700 80624867 -22870107 - ORSL-2b DNA Tip100 -43 465 299 3 1200 948 214 80 0 chr15 80625259 80625446 -22869528 - B3 SINE B2 -10 206 5 3 1200 3614 199 64 5 chr15 80625456 80626301 -22868673 + RCHARR1 DNA MER1_type 3 897 -77 3 1200 261 0 0 0 chr15 80626436 80626465 -22868509 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1200 372 178 14 14 chr15 80626465 80626539 -22868435 - ID_B1 SINE B4 -10 214 141 3 1200 315 278 39 49 chr15 80626539 80626567 -22868407 - PB1D7 SINE Alu -10 110 10 3 1200 1018 38 0 0 chr15 80627594 80627725 -22867249 + B1_Mus1 SINE Alu 18 148 0 3 1200 365 195 252 17 chr15 80627772 80627887 -22867087 - B1_Mur1 SINE Alu -7 142 1 3 1200 549 217 8 34 chr15 80627941 80628060 -22866914 + B3 SINE B2 15 130 -86 3 1200 195 188 0 0 chr15 80629021 80629069 -22865905 + GA-rich Low_complexity Low_complexity 2 49 0 3 1200 576 0 0 0 chr15 80629681 80629745 -22865229 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 1200 825 11 0 0 chr15 80632006 80632100 -22862874 + (TCTCC)n Simple_repeat Simple_repeat 2 95 0 3 1200 431 260 62 78 chr15 80633138 80633164 -22861810 + CYRA11_Mm Unknown Y-chromosome 155 349 -268 3 1200 1237 152 5 0 chr15 80633164 80633336 -22861638 - URR1B DNA MER1_type -14 211 39 3 1200 417 54 0 0 chr15 80633336 80633392 -22861582 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 1200 1237 152 5 0 chr15 80633392 80633429 -22861545 - URR1B DNA MER1_type -187 38 2 3 1200 318 315 0 0 chr15 80634031 80634142 -22860832 - PB1D7 SINE Alu -5 115 5 3 1200 225 0 0 0 chr15 80634339 80634364 -22860610 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 3 1200 605 244 15 0 chr15 80634364 80634499 -22860475 - B1F2 SINE Alu -12 137 1 3 1200 23 0 0 0 chr15 80634732 80634755 -22860219 + AT_rich Low_complexity Low_complexity 1 23 0 3 1200 1374 239 75 63 chr15 80634922 80635400 -22859574 + Lx8 LINE L1 6624 7107 -366 3 1200 336 48 0 0 chr15 80635495 80635537 -22859437 + (TC)n Simple_repeat Simple_repeat 2 43 0 3 1200 271 217 33 0 chr15 80635574 80635634 -22859340 + RMER15 LTR ERVL 404 465 -110 3 1200 5476 27 2 6 chr15 80635794 80636434 -22858540 - L1Md_F3 LINE L1 0 6584 5948 3 1200 717 153 81 0 chr15 80637274 80637398 -22857576 + B1_Mus1 SINE Alu 1 134 -14 3 1200 587 162 248 0 chr15 80637834 80637951 -22857023 + B1_Mur4 SINE Alu 1 146 -4 3 1200 522 276 87 36 chr15 80638520 80638795 -22856179 - Charlie5 DNA MER1_type -87 2537 2249 3 1200 195 42 0 0 chr15 80639334 80639358 -22855616 + (CG)n Simple_repeat Simple_repeat 2 25 0 3 1200 690 109 0 0 chr15 80639358 80639476 -22855498 + (CA)n Simple_repeat Simple_repeat 1 119 0 3 1200 706 197 13 58 chr15 80639853 80640009 -22854965 - B1_Mur2 SINE Alu 0 149 1 3 1200 34 42 0 0 chr15 80640083 80640131 -22854843 + AT_rich Low_complexity Low_complexity 1 48 0 3 1200 1338 71 11 21 chr15 80640281 80640469 -22854505 - B2_Mm2 SINE B2 -8 187 2 3 1200 332 205 60 43 chr15 80641198 80641315 -22853659 + MER2 DNA MER2_type 193 311 -34 3 1200 914 108 13 57 chr15 80641690 80641847 -22853127 - B1_Mur4 SINE Alu 0 150 1 3 1200 1167 43 0 0 chr15 80641909 80642047 -22852927 - B1_Mus1 SINE Alu -9 139 2 3 1200 736 234 42 26 chr15 80642069 80642262 -22852712 - B3A SINE B2 0 198 3 3 1200 474 173 0 12 chr15 80642376 80642458 -22852516 - B1_Mus2 SINE Alu -33 114 34 3 1200 645 25 0 0 chr15 80642458 80642537 -22852437 + (TG)n Simple_repeat Simple_repeat 2 80 0 3 1200 479 148 0 24 chr15 80642538 80642621 -22852353 - B1_Mus2 SINE Alu -34 113 33 3 1200 336 24 0 0 chr15 80642622 80642663 -22852311 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1200 200 188 0 0 chr15 80642781 80642813 -22852161 + polypurine Low_complexity Low_complexity 4 35 0 3 1200 1097 126 63 6 chr15 80643516 80643691 -22851283 + B2_Mm2 SINE B2 2 186 -9 3 1200 413 248 205 0 chr15 80643794 80643911 -22851063 - RSINE1 SINE B4 -22 143 3 3 1200 251 202 148 25 chr15 80643914 80643995 -22850979 - PB1D10 SINE Alu -1 116 26 3 1200 339 292 0 74 chr15 80644623 80644745 -22850229 - PB1D7 SINE Alu -7 113 1 3 1200 754 108 0 0 chr15 80644823 80644934 -22850040 + B1_Mus1 SINE Alu 11 121 -27 3 1200 360 0 0 0 chr15 80645014 80645054 -22849920 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1200 232 307 9 56 chr15 80645621 80645728 -22849246 - L2a LINE L2 -20 3406 3305 3 1200 595 254 43 36 chr15 80645828 80645967 -22849007 + B3A SINE B2 1 140 -58 3 1200 282 56 0 0 chr15 80645974 80646010 -22848964 + (CCCCCT)n Simple_repeat Simple_repeat 6 41 0 3 1200 3242 128 98 11 chr15 80646069 80646607 -22848367 - RMER4B LTR ERVK 0 585 1 3 1200 659 141 95 15 chr15 80647341 80647478 -22847496 - B1_Mur1 SINE Alu -1 148 1 3 1200 578 239 39 129 chr15 80647543 80647822 -22847152 + MER2 DNA MER2_type 92 345 0 3 1200 352 329 42 35 chr15 80648253 80648395 -22846579 - B1F2 SINE Alu -6 143 1 3 1200 588 254 28 0 chr15 80648635 80648777 -22846197 - B1F SINE Alu 0 149 4 3 1200 620 258 44 35 chr15 80649846 80650075 -22844899 - MamRep434 DNA TcMar -170 256 26 3 1200 465 323 55 0 chr15 80650518 80650645 -22844329 + RSINE1 SINE B4 3 136 -29 3 1200 204 125 0 0 chr15 80651053 80651085 -22843889 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1200 211 303 62 50 chr15 80651085 80651165 -22843809 - ID4_ SINE ID 0 83 3 3 1200 449 264 0 18 chr15 80651650 80651762 -22843212 - PB1D10 SINE Alu -6 111 2 3 1200 228 337 19 78 chr15 80651878 80651981 -22842993 - RSINE1 SINE B4 -61 104 8 3 1200 312 195 91 5 chr15 80651971 80652046 -22842928 - PB1D10 SINE Alu -36 113 36 3 1200 729 265 92 17 chr15 80652112 80652350 -22842624 - B4A SINE B4 -32 260 5 3 1200 201 163 0 0 chr15 80652911 80652960 -22842014 + (CTG)n Simple_repeat Simple_repeat 1 49 0 3 1200 1224 253 14 0 chr15 80653704 80653985 -22840989 - B4A SINE B4 0 292 8 3 1200 908 144 7 14 chr15 80654565 80654713 -22840261 - B1_Mus1 SINE Alu 0 148 2 3 1200 377 250 39 20 chr15 80654964 80655066 -22839908 + B3A SINE B2 22 125 -73 3 1200 23 33 0 0 chr15 80655083 80655113 -22839861 + AT_rich Low_complexity Low_complexity 1 30 0 3 1200 246 337 136 19 chr15 80655116 80655219 -22839755 + PB1D10 SINE Alu 2 116 -1 3 1200 1189 71 83 0 chr15 80655225 80655393 -22839581 + B2_Mm1t SINE B2 2 183 -10 3 1200 369 231 299 47 chr15 80655520 80655647 -22839327 + RSINE1 SINE B4 5 163 -2 3 1200 251 306 96 24 chr15 80655724 80655975 -22838999 + L1M5 LINE L1 4408 4676 -1470 3 1200 394 302 134 20 chr15 80656208 80656455 -22838519 - MLT1C LTR MaLR 0 467 193 3 1200 423 252 69 76 chr15 80656730 80656992 -22837982 + L1M5 LINE L1 5291 5550 -690 3 1200 497 221 232 7 chr15 80658395 80658550 -22836424 + ID_B1 SINE B4 2 191 -33 3 1200 210 143 0 0 chr15 80658590 80658625 -22836349 + (GAA)n Simple_repeat Simple_repeat 2 36 0 3 1200 674 201 172 11 chr15 80658636 80658822 -22836152 + B3 SINE B2 1 216 0 3 1200 784 257 58 73 chr15 80658879 80659139 -22835835 - MTE2a LTR MaLR -67 312 57 3 1200 1195 55 0 0 chr15 80659197 80659343 -22835631 - B1_Mus2 SINE Alu 0 147 2 3 1200 218 337 79 0 chr15 80660308 80660397 -22834577 + PB1D10 SINE Alu 2 97 -20 3 1200 1672 174 33 90 chr15 80660565 80660987 -22833987 + RMER10B LTR ERVL 1 398 0 3 1200 323 250 146 0 chr15 80661040 80661136 -22833838 + B1F SINE Alu 39 148 -1 3 1200 416 132 0 4 chr15 80661897 80661972 -22833002 - B1_Mus1 SINE Alu -21 96 25 3 1200 352 229 187 19 chr15 80661984 80662091 -22832883 + MER3 DNA MER1_type 79 203 -6 3 1200 207 0 0 0 chr15 80662119 80662142 -22832832 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1200 1537 47 16 5 chr15 80662152 80662343 -22832631 - B2_Mm1a SINE B2 0 193 1 4 1200 201 167 62 0 chr15 80662403 80662451 -22832523 + (TTTG)n Simple_repeat Simple_repeat 1 51 0 4 1200 628 175 50 28 chr15 80662451 80662592 -22832382 - B1_Mur2 SINE Alu 0 149 6 4 1200 881 240 82 42 chr15 80662708 80663039 -22831935 + MER2 DNA MER2_type 1 344 -1 4 1200 225 0 0 0 chr15 80663643 80663668 -22831306 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1200 324 294 188 10 chr15 80663747 80664039 -22830935 + L1MD2 LINE L1 6006 6349 -10 4 1200 770 267 62 5 chr15 80664234 80664445 -22830529 - ID_B1 SINE B4 -1 223 1 4 1200 262 308 22 44 chr15 80664505 80664641 -22830333 + MER104 DNA Tc2 40 172 -9 4 1200 356 216 56 47 chr15 80665033 80665140 -22829834 + LTR50 LTR ERVL 686 793 -2 4 1200 291 208 129 71 chr15 80665923 80666063 -22828911 - L1MB1 LINE L1 -186 5982 5835 4 1200 254 281 0 0 chr15 80666191 80666248 -22828726 - ID4 SINE ID -13 70 14 4 1200 857 144 14 0 chr15 80666481 80666627 -22828347 - B1_Mur3 SINE Alu 0 149 2 4 1200 291 235 8 136 chr15 80666524 80666642 -22828332 - MT2B LTR ERVL -343 258 156 4 1200 206 269 130 96 chr15 80666967 80667082 -22827892 + L2a LINE L2 3254 3411 -15 4 1200 1575 238 113 27 chr15 80667608 80668058 -22826916 + RCHARR1 DNA MER1_type 6 497 -477 4 1200 558 231 9 9 chr15 80668058 80668167 -22826807 + PB1D7 SINE Alu 1 109 -11 4 1200 1575 238 113 27 chr15 80668167 80668192 -22826782 + RCHARR1 DNA MER1_type 498 522 -452 4 1200 750 275 132 8 chr15 80668204 80668446 -22826528 + B4A SINE B4 1 272 -20 4 1200 1158 219 21 18 chr15 80668527 80668806 -22826168 + RCHARR1 DNA MER1_type 525 804 -170 4 1200 630 261 0 66 chr15 80668826 80668978 -22825996 + RSINE1 SINE B4 11 152 -13 4 1200 253 204 0 0 chr15 80669013 80669067 -22825907 + RCHARR1 DNA MER1_type 824 877 -97 4 1200 198 0 0 0 chr15 80669070 80669092 -22825882 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 1200 22 35 0 0 chr15 80669623 80669652 -22825322 + AT_rich Low_complexity Low_complexity 1 29 0 4 1200 1740 155 63 19 chr15 80670051 80670366 -22824608 - ORR1A4 LTR MaLR 0 329 1 4 1200 23 0 0 0 chr15 80671301 80671324 -22823650 + AT_rich Low_complexity Low_complexity 1 23 0 4 1200 1296 176 9 37 chr15 80671324 80671542 -22823432 + B3 SINE B2 1 212 -4 4 1200 342 349 35 55 chr15 80671997 80672197 -22822777 - L1MC LINE L1 -2158 5724 5529 4 1200 684 239 25 25 chr15 80672858 80673021 -22821953 - RSINE1 SINE B4 0 165 3 4 1200 1918 195 68 10 chr15 80673262 80673645 -22821329 + MTD LTR MaLR 1 405 -14 4 1200 229 167 74 0 chr15 80674494 80674548 -22820426 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 4 1200 510 278 28 0 chr15 80675155 80675263 -22819711 - PB1D7 SINE Alu -9 111 1 4 1200 321 289 21 32 chr15 80675299 80675392 -22819582 - RSINE1 SINE B4 -2 163 72 4 1200 24 32 0 0 chr15 80675421 80675452 -22819522 + AT_rich Low_complexity Low_complexity 1 31 0 4 1200 30 0 0 0 chr15 80675764 80675794 -22819180 + AT_rich Low_complexity Low_complexity 1 30 0 4 1200 334 183 56 0 chr15 80676037 80676108 -22818866 - B1_Mur1 SINE Alu -34 115 41 4 1200 696 280 212 28 chr15 80676545 80677090 -22817884 - L1ME1 LINE L1 -20 6159 5514 4 1200 297 0 0 0 chr15 80677167 80677200 -22817774 + (TTA)n Simple_repeat Simple_repeat 1 33 0 4 1200 214 357 25 49 chr15 80677387 80677549 -22817425 - L3 LINE CR1 -833 3656 3499 4 1200 273 57 0 0 chr15 80678362 80678397 -22816577 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1200 1255 14 0 0 chr15 80678397 80678535 -22816439 - B1_Mus2 SINE Alu -9 138 1 4 1200 1265 142 103 0 chr15 80678639 80678843 -22816131 + URR1A DNA MER1_type 2 226 0 4 1200 831 244 13 13 chr15 80678861 80679020 -22815954 + B3 SINE B2 1 161 -37 4 1200 609 83 0 0 chr15 80679020 80679104 -22815870 + (TA)n Simple_repeat Simple_repeat 1 84 0 4 1200 756 274 32 16 chr15 80679104 80679133 -22815841 + B3A SINE B2 162 191 -7 4 1200 916 265 20 4 chr15 80679208 80679454 -22815520 - L1MD2 LINE L1 0 6359 6110 4 1200 297 0 0 0 chr15 80680928 80680961 -22814013 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1200 1446 80 32 5 chr15 80680976 80681165 -22813809 - B2_Mm2 SINE B2 -1 194 1 4 1200 246 81 0 0 chr15 80681292 80681329 -22813645 + (CAGTG)n Simple_repeat Simple_repeat 1 37 0 4 1200 306 0 0 0 chr15 80682292 80682326 -22812648 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1200 330 246 336 14 chr15 80682355 80682569 -22812405 - B4 SINE B4 -7 285 3 4 1200 694 210 22 0 chr15 80682614 80682752 -22812222 - B1_Mur3 SINE Alu -6 143 3 4 1200 342 125 0 18 chr15 80682716 80682773 -22812201 + B1_Mus2 SINE Alu 77 132 -15 4 1200 258 125 0 0 chr15 80682791 80682831 -22812143 - B1_Mus1 SINE Alu -107 41 2 4 1200 416 314 34 41 chr15 80682869 80683015 -22811959 - RSINE1 SINE B4 -12 153 9 4 1200 1449 84 26 0 chr15 80683046 80683236 -22811738 + B2_Mm2 SINE B2 1 195 0 4 1200 885 217 145 19 chr15 80683269 80683579 -22811395 - RLTR15 LTR ERVK -10 349 1 4 1200 483 18 0 0 chr15 80684271 80684327 -22810647 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 1200 902 179 213 6 chr15 80684334 80684508 -22810466 - B3 SINE B2 -6 210 1 4 1200 1457 99 5 0 chr15 80684528 80684720 -22810254 - B2_Mm1a SINE B2 0 193 1 4 1200 575 218 48 21 chr15 80685087 80685232 -22809742 + B1F SINE Alu 1 149 0 4 1200 272 262 103 0 chr15 80685463 80685570 -22809404 - L1MC4 LINE L1 -675 7367 7250 4 1200 189 107 0 0 chr15 80686012 80686040 -22808934 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 1200 204 338 0 0 chr15 80686175 80686252 -22808722 - MER5B DNA MER1_type -99 79 3 4 1200 607 232 188 19 chr15 80686884 80687038 -22807936 - B3 SINE B2 -10 206 27 4 1200 432 114 0 71 chr15 80687052 80687137 -22807837 - L1Md_F2 LINE L1 -3 6579 6501 4 1200 25 0 0 0 chr15 80687371 80687396 -22807578 + AT_rich Low_complexity Low_complexity 1 25 0 4 1200 201 183 27 53 chr15 80687398 80687473 -22807501 + (GTTTG)n Simple_repeat Simple_repeat 3 75 0 4 1200 198 0 0 0 chr15 80687477 80687499 -22807475 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 1200 492 242 21 188 chr15 80688214 80688453 -22806521 + B4A SINE B4 1 199 -93 4 1200 685 247 98 23 chr15 80688495 80688669 -22806305 + B3 SINE B2 25 211 -5 4 1200 219 289 13 13 chr15 80689110 80689187 -22805787 + GA-rich Low_complexity Low_complexity 5 81 0 4 1200 628 220 67 15 chr15 80689626 80689760 -22805214 + B1F SINE Alu 2 142 -7 4 1200 470 270 44 40 chr15 80690663 80690804 -22804170 + ID_B1 SINE B4 75 213 -11 4 1200 887 93 40 0 chr15 80691178 80691329 -22803645 + RMER17B LTR ERVK 307 463 -495 4 1200 586 181 86 0 chr15 80691344 80691449 -22803525 + B1_Mur4 SINE Alu 36 149 -1 4 1200 315 0 0 0 chr15 80691455 80691490 -22803484 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1200 285 122 78 0 chr15 80691490 80691574 -22803400 + (TA)n Simple_repeat Simple_repeat 2 92 0 4 1200 191 328 62 55 chr15 80692188 80692333 -22802641 + L2c LINE L2 3242 3387 0 4 1200 734 259 196 32 chr15 80693354 80693792 -22801182 - Lx8 LINE L1 0 7473 6964 4 1200 227 303 53 0 chr15 80695449 80695525 -22799449 + MER5B DNA MER1_type 3 82 -96 4 1200 258 352 17 61 chr15 80696115 80696230 -22798744 - PB1 SINE Alu -12 115 6 4 1200 521 99 12 0 chr15 80696458 80696539 -22798435 + (GA)n Simple_repeat Simple_repeat 1 82 0 4 1200 2264 126 116 16 chr15 80697077 80697447 -22797527 - MTB_Mm LTR MaLR 0 407 1 4 1200 467 270 78 28 chr15 80698389 80698530 -22796444 + RSINE1 SINE B4 1 148 -17 4 1200 363 327 0 78 chr15 80699050 80699166 -22795808 + PB1D7 SINE Alu 2 108 -12 4 1200 1749 31 5 0 chr15 80699257 80699449 -22795525 + B2_Mm1t SINE B2 1 193 0 4 1200 198 0 0 0 chr15 80699555 80699577 -22795397 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 4 1200 263 281 144 0 chr15 80699604 80699752 -22795222 + MER58B DNA MER1_type 147 316 -25 4 1200 4129 68 164 11 chr15 80700228 80700854 -22794120 + L1VL2 LINE L1 284 1005 -5330 4 1200 1229 89 0 0 chr15 80700854 80701012 -22793962 + B2_Mm2 SINE B2 1 158 -37 4 1200 199 0 0 61 chr15 80701013 80701046 -22793928 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 4 1200 12053 87 4 28 chr15 80701046 80702855 -22792119 + L1VL1 LINE L1 1064 2830 -868 4 1200 1284 61 0 6 chr15 80702855 80703020 -22791954 + B2_Mm2 SINE B2 4 167 -28 4 1200 1652 74 25 4 chr15 80703030 80703274 -22791700 + L1VL1 LINE L1 2824 3072 -626 4 1200 204 56 27 27 chr15 80703755 80703792 -22791182 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 4 1200 24 0 0 0 chr15 80704055 80704079 -22790895 + AT_rich Low_complexity Low_complexity 1 24 0 4 1200 225 0 0 0 chr15 80704086 80704111 -22790863 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 4 1200 218 100 0 0 chr15 80704130 80704160 -22790814 - B2_Mm2 SINE B2 -94 101 72 4 1200 1375 85 11 22 chr15 80704211 80704392 -22790582 - B2_Mm1a SINE B2 -14 179 1 4 1200 407 243 150 18 chr15 80704524 80704637 -22790337 - RSINE1 SINE B4 -31 134 7 4 1200 543 167 26 29 chr15 80706318 80706432 -22788542 + PB1D9 SINE Alu 1 120 0 4 1200 23 33 0 0 chr15 80706441 80706471 -22788503 + AT_rich Low_complexity Low_complexity 1 30 0 4 1200 317 86 0 17 chr15 80707413 80707472 -22787502 + (TTTG)n Simple_repeat Simple_repeat 4 61 0 4 1200 1012 70 0 0 chr15 80707472 80707601 -22787373 - B1_Mus1 SINE Alu 0 148 20 4 1200 298 273 159 0 chr15 80707747 80707835 -22787139 - PB1D10 SINE Alu -6 111 10 4 1200 461 295 101 0 chr15 80707923 80708062 -22786912 + RSINE1 SINE B4 3 155 -10 5 1200 462 230 129 10 chr15 80709046 80709147 -22785827 + RSINE1 SINE B4 43 155 -10 5 1200 331 256 25 13 chr15 80712163 80712242 -22782732 - ID4 SINE ID -2 81 2 5 1200 404 273 129 52 chr15 80713074 80713306 -22781668 - L1MC LINE L1 -2122 5760 5511 5 1200 207 0 0 0 chr15 80713921 80713944 -22781030 + (TTGG)n Simple_repeat Simple_repeat 2 24 0 5 1200 457 194 294 9 chr15 80713944 80714053 -22780921 - B1_Mur4 SINE Alu -8 142 3 5 1200 488 230 23 0 chr15 80714291 80714378 -22780596 - PB1D7 SINE Alu -31 89 1 5 1200 247 268 0 0 chr15 80715388 80715444 -22779530 - ID4_ SINE ID 0 83 28 5 1200 369 0 0 0 chr15 80715444 80715485 -22779489 + (CTG)n Simple_repeat Simple_repeat 2 42 0 5 1200 303 28 0 0 chr15 80715580 80715616 -22779358 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 1200 270 0 0 0 chr15 80715616 80715645 -22779329 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 1200 1282 62 0 0 chr15 80716183 80716329 -22778645 - B1_Mus2 SINE Alu 0 147 2 5 1200 414 228 11 0 chr15 80716336 80716428 -22778546 - L1MB3 LINE L1 0 6183 6091 5 1200 249 232 61 6 chr15 80716518 80716683 -22778291 + (TA)n Simple_repeat Simple_repeat 2 175 0 5 1200 269 270 94 51 chr15 80716689 80716806 -22778168 + PB1 SINE Alu 1 122 -5 5 1200 21 0 0 0 chr15 80717717 80717738 -22777236 + AT_rich Low_complexity Low_complexity 1 21 0 5 1200 26 0 0 0 chr15 80720991 80721017 -22773957 + AT_rich Low_complexity Low_complexity 1 26 0 5 1200 771 224 155 21 chr15 80721018 80721205 -22773769 + B3 SINE B2 5 216 0 5 1200 1291 27 0 14 chr15 80721327 80721475 -22773499 + B1_Mm SINE Alu 2 147 0 5 1200 23 0 0 0 chr15 80722166 80722189 -22772785 + AT_rich Low_complexity Low_complexity 1 23 0 5 1200 444 257 28 37 chr15 80722438 80722547 -22772427 + PB1D7 SINE Alu 1 108 -12 5 1200 23 54 0 0 chr15 80722605 80722642 -22772332 + AT_rich Low_complexity Low_complexity 1 37 0 5 1200 378 128 218 0 chr15 80723043 80723121 -22771853 + B1_Mus2 SINE Alu 53 147 0 5 1200 261 239 143 0 chr15 80724359 80724449 -22770525 + B1F1 SINE Alu 1 117 -3 5 1200 360 223 103 31 chr15 80725740 80725837 -22769137 - B3 SINE B2 -56 160 57 5 1200 1287 76 6 23 chr15 80726377 80726553 -22768421 + B2_Mm1a SINE B2 2 174 -19 5 1200 252 0 0 0 chr15 80726736 80726764 -22768210 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1200 527 205 16 33 chr15 80727663 80727784 -22767190 - PB1D9 SINE Alu 0 120 2 5 1200 516 203 47 80 chr15 80728632 80728782 -22766192 + B4 SINE B4 77 221 -71 5 1200 1053 36 0 0 chr15 80728650 80728787 -22766187 + B1_Mus1 SINE Alu 12 148 0 5 1200 726 101 67 0 chr15 80728933 80729052 -22765922 + B1_Mur3 SINE Alu 23 149 0 5 1200 450 102 132 164 chr15 80729470 80729622 -22765352 + B1_Mur3 SINE Alu 3 149 0 5 1200 273 302 104 0 chr15 80729937 80730043 -22764931 + B3A SINE B2 71 187 -11 5 1200 219 309 0 0 chr15 80730129 80730184 -22764790 + B1_Mur1 SINE Alu 73 127 -22 5 1200 283 238 33 4 chr15 80730181 80730251 -22764723 + ID4_ SINE ID 8 77 -75 5 1200 716 200 0 0 chr15 80730359 80730489 -22764485 + B3 SINE B2 1 130 -86 5 1200 200 233 0 0 chr15 80730733 80730776 -22764198 - L2b LINE L2 -1 3374 3332 5 1200 585 103 19 67 chr15 80731622 80731726 -22763248 + PB1D9 SINE Alu 21 119 -1 5 1200 208 0 0 59 chr15 80731818 80731852 -22763122 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 5 1200 1107 43 14 21 chr15 80731852 80731988 -22762986 - B1_Mus1 SINE Alu -11 137 1 5 1200 204 40 0 0 chr15 80732734 80732759 -22762215 + (CAG)n Simple_repeat Simple_repeat 3 27 0 5 1200 285 75 0 0 chr15 80732973 80733013 -22761961 + (CAG)n Simple_repeat Simple_repeat 1 40 0 5 1200 1404 109 16 0 chr15 80733223 80733415 -22761559 - B2_Mm2 SINE B2 0 195 1 5 1200 27 0 0 0 chr15 80733421 80733448 -22761526 + AT_rich Low_complexity Low_complexity 1 27 0 5 1200 300 218 16 141 chr15 80733448 80733576 -22761398 + MT2B LTR ERVL 153 264 -337 5 1200 824 158 7 7 chr15 80733466 80733606 -22761368 + B1_Mur4 SINE Alu 6 145 -5 5 1200 22 0 0 0 chr15 80733606 80733628 -22761346 + AT_rich Low_complexity Low_complexity 1 22 0 5 1200 946 200 70 5 chr15 80733631 80733832 -22761142 - B3 SINE B2 -2 214 1 5 1200 297 228 0 81 chr15 80733865 80733951 -22761023 + B4 SINE B4 145 223 -69 5 1200 246 273 13 25 chr15 80733975 80734054 -22760920 + B4 SINE B4 215 292 0 5 1200 914 162 0 0 chr15 80734374 80734516 -22760458 + B1_Mur4 SINE Alu 1 142 -8 5 1200 249 83 0 0 chr15 80734545 80734581 -22760393 + (TAGG)n Simple_repeat Simple_repeat 1 36 0 5 1200 368 333 0 0 chr15 80734607 80734703 -22760271 + PB1D10 SINE Alu 1 96 -21 5 1200 1054 82 0 52 chr15 80735172 80735326 -22759648 + B1_Mus2 SINE Alu 2 147 0 5 1200 486 243 16 11 chr15 80735488 80735602 -22759372 - B1_Mur4 SINE Alu 0 117 1 5 1200 236 330 30 10 chr15 80735658 80735759 -22759215 + Charlie2a DNA MER1_type 669 771 -2090 5 1200 594 48 427 0 chr15 80735759 80735862 -22759112 - B1_Mus2 SINE Alu 0 147 1 5 1200 450 315 56 47 chr15 80735916 80736129 -22758845 + ID_B1 SINE B4 8 222 -2 5 1200 272 270 27 99 chr15 80736162 80736273 -22758701 + PB1D10 SINE Alu 9 111 -6 5 1200 183 85 42 21 chr15 80736379 80736427 -22758547 + (TTTTG)n Simple_repeat Simple_repeat 3 51 0 5 1200 1013 222 19 19 chr15 80736470 80736677 -22758297 - B3 SINE B2 -7 209 3 5 1200 471 99 81 32 chr15 80736846 80736953 -22758021 - B1_Mur4 SINE Alu -5 115 12 5 1200 25 0 0 0 chr15 80737182 80737207 -22757767 + AT_rich Low_complexity Low_complexity 1 25 0 5 1200 322 193 4 0 chr15 80737228 80737307 -22757667 + B1_Mur2 SINE Alu 46 127 -22 5 1200 1068 88 0 39 chr15 80737369 80737522 -22757452 + B1_Mus2 SINE Alu 1 147 0 5 1200 1138 55 0 40 chr15 80737541 80737693 -22757281 + B1_Mus2 SINE Alu 2 147 0 5 1200 488 200 67 0 chr15 80737798 80737903 -22757071 - B1_Mur2 SINE Alu -17 132 21 5 1200 261 207 17 0 chr15 80737950 80738008 -22756966 + ID_B1 SINE B4 91 149 -75 5 1200 258 211 232 0 chr15 80738008 80738036 -22756938 + PB1D10 SINE Alu 26 117 0 5 1200 373 272 71 29 chr15 80738039 80738179 -22756795 + RSINE1 SINE B4 3 148 -17 5 1200 2607 78 96 5 chr15 80738359 80738745 -22756229 - BGLII LTR ERVK 0 421 1 5 1200 3730 184 43 45 chr15 80738746 80739673 -22755301 - RMER3D-int LTR ERVK -1 2841 1917 5 1200 2156 178 127 75 chr15 80739667 80740332 -22754642 - RMER3D-int LTR ERVK -1149 1693 470 5 1201 189 0 0 0 chr15 80740377 80740398 -22754576 + (TTTCC)n Simple_repeat Simple_repeat 2 22 0 5 1201 806 83 19 0 chr15 80740427 80740535 -22754439 + PB1D9 SINE Alu 1 110 -10 5 1201 28 79 0 0 chr15 80740614 80740677 -22754297 + AT_rich Low_complexity Low_complexity 1 63 0 5 1201 286 289 31 0 chr15 80740736 80740833 -22754141 + RSINE1 SINE B4 4 103 -62 5 1201 975 160 0 0 chr15 80740840 80741015 -22753959 + CT-rich Low_complexity Low_complexity 2 176 0 5 1201 21 0 0 0 chr15 80741052 80741073 -22753901 + AT_rich Low_complexity Low_complexity 1 21 0 5 1201 359 234 213 7 chr15 80742342 80742497 -22752477 + B3 SINE B2 3 189 -27 5 1201 22 0 0 0 chr15 80742497 80742519 -22752455 + AT_rich Low_complexity Low_complexity 1 22 0 5 1201 499 46 58 0 chr15 80743192 80743279 -22751695 + (TC)n Simple_repeat Simple_repeat 1 92 0 5 1201 398 238 19 0 chr15 80743979 80744084 -22750890 - PB1D7 SINE Alu -7 113 7 5 1201 393 173 23 76 chr15 80744106 80744214 -22750760 + PB1D9 SINE Alu 14 143 -6 5 1201 264 304 10 52 chr15 80744238 80744335 -22750639 - B1_Mm SINE Alu -49 98 6 5 1201 236 337 11 21 chr15 80744251 80744345 -22750629 - ID_B1 SINE B4 -55 169 77 5 1201 902 195 109 10 chr15 80744348 80744540 -22750434 - B3 SINE B2 -4 212 2 5 1201 24 0 0 0 chr15 80744551 80744575 -22750399 + AT_rich Low_complexity Low_complexity 1 24 0 5 1201 851 43 0 0 chr15 80744781 80744896 -22750078 + B1_Mus1 SINE Alu 34 148 0 5 1201 231 325 24 0 chr15 80745075 80745158 -22749816 + B1F SINE Alu 65 149 0 5 1201 1245 48 0 0 chr15 80745221 80745367 -22749607 - B1_Mus2 SINE Alu 0 147 2 5 1201 921 216 14 19 chr15 80746861 80747073 -22747901 - B3 SINE B2 -4 212 2 5 1201 225 220 34 0 chr15 80747656 80747715 -22747259 + CT-rich Low_complexity Low_complexity 2 62 0 5 1201 1111 103 0 0 chr15 80748714 80748860 -22746114 + B1_Mus2 SINE Alu 2 147 0 5 1201 554 239 42 56 chr15 80749576 80749718 -22745256 + B4A SINE B4 1 140 -152 5 1201 389 257 27 9 chr15 80749750 80749860 -22745114 + B4 SINE B4 95 206 -86 5 1201 514 202 0 0 chr15 80749902 80749996 -22744978 - RMER1C Other Other -10 1332 1239 5 1201 4527 155 65 150 chr15 80750010 80750406 -22744568 - ORR1A2-int LTR MaLR -472 1320 891 5 1201 225 0 0 0 chr15 80750406 80750431 -22744543 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 5 1201 4527 155 65 150 chr15 80750431 80750558 -22744416 - ORR1A2-int LTR MaLR -902 890 853 5 1201 1623 42 5 0 chr15 80750558 80750750 -22744224 - B2_Mm1t SINE B2 0 193 1 5 1201 4527 155 65 150 chr15 80750750 80751312 -22743662 - ORR1A2-int LTR MaLR -940 852 402 5 1201 1284 20 0 0 chr15 80751312 80751459 -22743515 - B1_Mm SINE Alu 0 147 1 5 1201 4527 155 65 150 chr15 80751459 80751813 -22743161 - ORR1A2-int LTR MaLR -1391 401 1 5 1201 438 18 0 0 chr15 80751813 80751868 -22743106 - ORR1A2 LTR MaLR 0 346 292 5 1201 246 254 18 0 chr15 80751865 80751920 -22743054 - MT2B LTR ERVL -389 212 157 5 1201 826 127 51 0 chr15 80751875 80752033 -22742941 - ORR1A2-int LTR MaLR -1187 605 440 5 1201 931 24 186 0 chr15 80752048 80752172 -22742802 + B1_Mus2 SINE Alu 1 147 0 5 1201 1677 112 11 18 chr15 80752187 80752459 -22742515 - ORR1A2 LTR MaLR -57 270 1 5 1201 665 193 89 0 chr15 80752575 80752710 -22742264 - B1_Mus1 SINE Alu 0 148 2 6 1201 758 157 0 7 chr15 80753059 80753200 -22741774 + (TAGA)n Simple_repeat Simple_repeat 1 140 0 6 1201 575 261 92 0 chr15 80753200 80753342 -22741632 - B3 SINE B2 -31 185 31 6 1201 22 0 0 0 chr15 80753785 80753807 -22741167 + AT_rich Low_complexity Low_complexity 1 22 0 6 1201 426 208 189 16 chr15 80754642 80754769 -22740205 + B1_Mur1 SINE Alu 1 149 0 6 1201 774 136 45 67 chr15 80754878 80755012 -22739962 - B1_Mur4 SINE Alu -19 131 1 6 1201 1255 41 0 0 chr15 80755070 80755217 -22739757 + B1_Mus2 SINE Alu 1 147 0 6 1201 1385 100 5 5 chr15 80755313 80755504 -22739470 - B2_Mm1a SINE B2 -2 191 1 6 1201 1184 74 0 13 chr15 80756152 80756302 -22738672 - B1_Mus1 SINE Alu 0 148 1 6 1201 1083 50 58 0 chr15 80756358 80756497 -22738477 - B1_Mm SINE Alu 0 147 1 6 1201 932 140 53 58 chr15 80756725 80756915 -22738059 + B2_Mm2 SINE B2 1 189 -6 6 1201 252 217 17 0 chr15 80757155 80757215 -22737759 - ID2 SINE ID -9 74 14 6 1201 21 0 0 0 chr15 80757652 80757673 -22737301 + AT_rich Low_complexity Low_complexity 1 21 0 6 1201 1438 70 21 0 chr15 80757674 80757860 -22737114 + B2_Mm2 SINE B2 2 191 -4 6 1201 198 0 0 0 chr15 80758413 80758435 -22736539 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 6 1201 796 211 7 0 chr15 80758435 80758571 -22736403 - B1_Mur2 SINE Alu -10 139 3 6 1201 225 94 0 0 chr15 80758848 80758880 -22736094 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 6 1201 306 294 177 39 chr15 80758911 80759121 -22735853 - L1MC1 LINE L1 0 6333 6094 6 1201 477 0 0 0 chr15 80759121 80759174 -22735800 + (TGG)n Simple_repeat Simple_repeat 2 54 0 6 1201 306 294 177 39 chr15 80759174 80759268 -22735706 - L1MC1 LINE L1 -240 6093 5987 6 1201 385 247 82 0 chr15 80759310 80759407 -22735567 + ID_B1 SINE B4 3 107 -117 6 1201 21 57 0 0 chr15 80760198 80760233 -22734741 + AT_rich Low_complexity Low_complexity 1 35 0 6 1201 205 186 0 0 chr15 80760426 80760469 -22734505 + A-rich Low_complexity Low_complexity 1 43 0 6 1201 213 200 25 0 chr15 80760609 80760649 -22734325 + (CCCCG)n Simple_repeat Simple_repeat 4 44 0 6 1201 243 61 0 0 chr15 80760834 80760867 -22734107 + (G)n Simple_repeat Simple_repeat 1 33 0 6 1201 324 0 0 0 chr15 80761699 80761735 -22733239 + (CGGG)n Simple_repeat Simple_repeat 3 38 0 6 1201 227 37 0 0 chr15 80762740 80762767 -22732207 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 1201 543 162 0 0 chr15 80762767 80762866 -22732108 + (TA)n Simple_repeat Simple_repeat 2 100 0 6 1201 21 57 0 0 chr15 80763154 80763189 -22731785 + AT_rich Low_complexity Low_complexity 1 35 0 6 1201 270 0 0 0 chr15 80765580 80765610 -22729364 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 6 1201 668 158 158 0 chr15 80766117 80766244 -22728730 + B1_Mur2 SINE Alu 3 149 0 6 1201 297 0 0 0 chr15 80767378 80767411 -22727563 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 1201 279 0 0 0 chr15 80767411 80767441 -22727533 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1201 28 29 0 0 chr15 80767541 80767576 -22727398 + AT_rich Low_complexity Low_complexity 1 35 0 6 1201 414 0 0 0 chr15 80769388 80769434 -22725540 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1201 207 0 0 0 chr15 80771185 80771208 -22723766 + (TA)n Simple_repeat Simple_repeat 2 24 0 6 1201 180 26 73 49 chr15 80771359 80771400 -22723574 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 6 1201 348 161 0 0 chr15 80771583 80771645 -22723329 + CT-rich Low_complexity Low_complexity 4 65 0 6 1201 2926 63 3 0 chr15 80772614 80772993 -22721981 + L1Md_F2 LINE L1 6203 6582 0 6 1201 1731 105 22 138 chr15 80773107 80773206 -22721768 - ORR1A4 LTR MaLR -8 321 268 6 1201 992 87 0 48 chr15 80773206 80773351 -22721623 - B1_Mus1 SINE Alu -9 139 2 6 1201 1731 105 22 138 chr15 80773351 80773614 -22721360 - ORR1A4 LTR MaLR -62 267 1 6 1201 344 211 0 13 chr15 80774016 80774093 -22720881 + PB1 SINE Alu 30 105 -22 6 1201 608 238 35 0 chr15 80774108 80774251 -22720723 - B1F SINE Alu -1 148 1 6 1201 354 269 36 18 chr15 80774558 80774668 -22720306 + PB1D7 SINE Alu 8 119 -1 6 1201 862 142 5 15 chr15 80774672 80774860 -22720114 + B2_Mm1t SINE B2 1 185 -10 6 1201 326 225 214 0 chr15 80774979 80775068 -22719906 - RSINE1 SINE B4 -54 111 4 6 1201 1234 41 0 0 chr15 80775097 80775244 -22719730 - B1_Mus2 SINE Alu 0 147 1 6 1201 597 229 32 19 chr15 80775444 80775600 -22719374 + ID_B1 SINE B4 67 224 0 6 1201 400 200 25 0 chr15 80775625 80775705 -22719269 + B3 SINE B2 9 90 -126 6 1201 1333 238 135 49 chr15 80775705 80776217 -22718757 + RMER2 LTR ERV1 1 556 -11 6 1201 503 219 0 37 chr15 80776224 80776333 -22718641 + B3 SINE B2 87 191 -25 6 1201 24 0 0 0 chr15 80776347 80776371 -22718603 + AT_rich Low_complexity Low_complexity 1 24 0 6 1201 474 174 558 0 chr15 80776427 80776565 -22718409 + B3 SINE B2 2 216 0 6 1201 640 93 111 0 chr15 80776896 80777004 -22717970 + PB1D9 SINE Alu 1 120 0 6 1201 878 163 7 20 chr15 80777130 80777280 -22717694 - B1_Mur4 SINE Alu -2 148 1 6 1201 544 216 8 41 chr15 80777537 80777658 -22717316 + PB1D9 SINE Alu 3 119 -1 6 1201 282 107 283 28 chr15 80777767 80777873 -22717101 - L1M3e LINE L1 -5783 1247 1115 6 1201 361 97 130 65 chr15 80778204 80778221 -22716753 - B1_Mur3 SINE Alu 0 149 137 6 1201 243 0 0 0 chr15 80778221 80778248 -22716726 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 6 1201 361 97 130 65 chr15 80778248 80778307 -22716667 - B1_Mur3 SINE Alu -13 136 68 6 1201 26 0 0 27 chr15 80778307 80778330 -22716644 + AT_rich Low_complexity Low_complexity 1 23 0 6 1201 1302 14 0 7 chr15 80778330 80778478 -22716496 - B1_Mm SINE Alu 0 147 1 6 1201 26 0 0 27 chr15 80778478 80778491 -22716483 + AT_rich Low_complexity Low_complexity 1 13 0 6 1201 444 254 26 17 chr15 80779302 80779418 -22715556 + RSINE1 SINE B4 16 132 -33 6 1201 246 62 0 0 chr15 80779419 80779451 -22715523 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1201 558 183 25 50 chr15 80779531 80779652 -22715322 - Lx9 LINE L1 -891 6753 6636 6 1201 351 216 27 0 chr15 80779696 80779807 -22715167 + CT-rich Low_complexity Low_complexity 2 115 0 6 1201 586 259 78 0 chr15 80780003 80780169 -22714805 - B3A SINE B2 -16 182 4 6 1201 580 200 0 60 chr15 80780195 80780312 -22714662 + B1_Mur1 SINE Alu 30 139 -10 6 1201 366 23 0 0 chr15 80780312 80780355 -22714619 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1201 640 203 29 22 chr15 80780393 80780529 -22714445 + B3 SINE B2 1 137 -79 6 1201 254 287 62 74 chr15 80780594 80780756 -22714218 - RSINE1 SINE B4 -1 164 5 6 1201 267 355 27 0 chr15 80780749 80780859 -22714115 - B1_Mm SINE Alu -34 113 1 6 1201 1172 49 14 0 chr15 80781107 80781251 -22713723 - B1_Mus2 SINE Alu -1 146 1 6 1201 844 144 79 0 chr15 80781298 80781437 -22713537 + B1_Mur4 SINE Alu 1 150 0 6 1201 270 0 0 0 chr15 80781581 80781611 -22713363 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 6 1201 1220 46 13 0 chr15 80781611 80781762 -22713212 - B2_Mm2 SINE B2 -36 159 7 6 1201 1636 26 21 0 chr15 80781770 80781959 -22713015 - B2_Mm1a SINE B2 0 193 1 6 1201 246 62 0 0 chr15 80781961 80781993 -22712981 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 6 1201 1289 63 0 0 chr15 80781993 80782152 -22712822 - B2_Mm1t SINE B2 -33 160 2 6 1201 614 103 113 0 chr15 80782160 80782257 -22712717 + B2_Mm2 SINE B2 38 145 -50 6 1201 1590 32 16 16 chr15 80782361 80782552 -22712422 - B2_Mm1t SINE B2 -2 191 1 6 1201 189 0 0 0 chr15 80783412 80783433 -22711541 + (CAA)n Simple_repeat Simple_repeat 2 22 0 6 1201 739 145 85 21 chr15 80783524 80783665 -22711309 - B1_Mur4 SINE Alu 0 150 1 6 1201 583 242 94 44 chr15 80783687 80783890 -22711084 - B3 SINE B2 -1 215 3 6 1201 260 269 144 0 chr15 80784024 80784128 -22710846 + PB1 SINE Alu 2 120 -7 6 1201 720 109 36 9 chr15 80784249 80784360 -22710614 - PB1D9 SINE Alu -6 114 1 6 1201 299 304 24 65 chr15 80784366 80784489 -22710485 - PB1 SINE Alu -2 125 8 6 1201 634 259 28 0 chr15 80784581 80784724 -22710250 - RSINE1 SINE B4 -16 149 3 6 1201 229 254 88 15 chr15 80784839 80784907 -22710067 + ID4 SINE ID 3 75 -8 6 1201 448 223 29 0 chr15 80784984 80785091 -22709883 + B1_Mur2 SINE Alu 9 121 -28 6 1201 351 0 0 0 chr15 80785122 80785161 -22709813 + (TGGA)n Simple_repeat Simple_repeat 4 42 0 6 1201 651 326 5 35 chr15 80785346 80785546 -22709428 - ID_B1 SINE B4 -15 209 16 6 1201 214 191 143 0 chr15 80786260 80786323 -22708651 + PB1D7 SINE Alu 40 111 -9 6 1201 320 339 26 0 chr15 80786918 80787033 -22707941 + PB1 SINE Alu 1 118 -9 6 1201 1161 62 0 0 chr15 80787067 80787212 -22707762 - B1_Mus2 SINE Alu -2 145 1 6 1201 621 232 25 38 chr15 80787239 80787396 -22707578 - RSINE1 SINE B4 -8 157 3 6 1201 552 205 84 30 chr15 80787443 80787574 -22707400 - B3 SINE B2 -5 211 74 6 1201 244 359 74 35 chr15 80787616 80787818 -22707156 + L1M5 LINE L1 5632 5841 -283 6 1201 615 237 57 14 chr15 80787873 80788014 -22706960 + B1_Mur2 SINE Alu 3 149 0 6 1201 1443 83 16 0 chr15 80788230 80788422 -22706552 - B2_Mm2 SINE B2 0 195 1 6 1201 258 270 14 87 chr15 80788465 80788534 -22706440 - B4 SINE B4 -143 149 86 6 1201 1011 47 79 0 chr15 80788586 80788713 -22706261 - B1_Mus2 SINE Alu -10 137 1 6 1201 380 294 97 40 chr15 80788852 80789126 -22705848 - L1MB7 LINE L1 -185 5998 5694 7 1201 583 165 34 25 chr15 80789592 80789710 -22705264 + PB1D9 SINE Alu 1 119 -1 7 1201 210 279 128 0 chr15 80789865 80789951 -22705023 + L2a LINE L2 3280 3376 -50 7 1201 1158 115 37 27 chr15 80790170 80790358 -22704616 + B2_Mm2 SINE B2 1 190 -5 7 1201 801 208 0 20 chr15 80790385 80790532 -22704442 - RSINE1 SINE B4 -19 146 3 7 1201 271 277 87 29 chr15 80790536 80790640 -22704334 - PB1D10 SINE Alu -1 116 7 7 1201 201 163 0 0 chr15 80791207 80791256 -22703718 + T-rich Low_complexity Low_complexity 1 49 0 7 1201 501 189 21 10 chr15 80791281 80791377 -22703597 - B3 SINE B2 -86 130 34 7 1201 889 125 8 0 chr15 80791386 80791514 -22703460 - B1_Mus1 SINE Alu 0 148 20 7 1201 391 262 79 92 chr15 80791388 80791552 -22703422 - B4 SINE B4 -69 223 62 7 1201 531 0 0 0 chr15 80791559 80791618 -22703356 + (TG)n Simple_repeat Simple_repeat 2 60 0 7 1201 805 157 0 0 chr15 80791625 80791740 -22703234 - B1_Mur3 SINE Alu -32 117 3 7 1201 219 186 0 0 chr15 80791892 80791935 -22703039 + CT-rich Low_complexity Low_complexity 2 44 0 7 1201 935 216 14 42 chr15 80791983 80792196 -22702778 - B3 SINE B2 -3 213 7 7 1201 690 291 12 12 chr15 80792209 80792376 -22702598 - B3A SINE B2 0 198 32 7 1201 310 172 94 0 chr15 80792380 80792444 -22702530 + MT2B LTR ERVL 168 237 -364 7 1201 285 70 23 0 chr15 80792435 80792478 -22702496 - B3 SINE B2 -172 44 1 7 1201 383 290 92 0 chr15 80792516 80792647 -22702327 - B1F SINE Alu -4 145 3 7 1201 521 236 64 0 chr15 80792940 80793080 -22701894 - B1_Mur2 SINE Alu 0 149 1 7 1201 307 314 0 114 chr15 80793231 80793273 -22701701 - RSINE1 SINE B4 -6 159 4 7 1201 714 173 15 8 chr15 80793273 80793407 -22701567 - B2_Mm2 SINE B2 -58 137 3 7 1201 1264 47 0 0 chr15 80793429 80793577 -22701397 - B1_Mus1 SINE Alu 0 148 1 7 1201 778 261 48 29 chr15 80794670 80794879 -22700095 + ID_B1 SINE B4 12 224 0 7 1201 943 195 62 10 chr15 80795099 80795291 -22699683 - B3 SINE B2 -7 209 8 7 1201 270 266 73 21 chr15 80795283 80795379 -22699595 - MER2 DNA MER2_type -120 225 125 7 1201 886 118 73 0 chr15 80796907 80797043 -22697931 - B1_Mur3 SINE Alu -1 148 3 7 1201 731 235 130 5 chr15 80797139 80797323 -22697651 - B3 SINE B2 -8 208 2 7 1201 455 276 8 8 chr15 80797641 80797663 -22697311 + ID SINE ID 60 81 -143 7 1201 626 177 26 0 chr15 80797663 80797776 -22697198 + PB1D9 SINE Alu 1 116 -4 7 1201 311 209 30 109 chr15 80798326 80798425 -22696549 + B1F1 SINE Alu 54 148 -1 7 1201 284 340 33 26 chr15 80798601 80798752 -22696222 + B3A SINE B2 44 195 -3 7 1201 821 89 48 0 chr15 80799258 80799382 -22695592 + B1_Mus2 SINE Alu 17 146 -1 7 1201 341 268 52 96 chr15 80799271 80799407 -22695567 + B4 SINE B4 120 249 -43 7 1201 1193 62 31 0 chr15 80799403 80799563 -22695411 + B2_Mm2 SINE B2 31 195 0 7 1201 506 189 81 0 chr15 80799632 80799743 -22695231 - PB1D9 SINE Alu 0 120 1 7 1201 240 280 88 20 chr15 80799892 80799994 -22694980 - Tigger5 DNA MER2_type -130 2276 2168 7 1201 216 188 172 81 chr15 80800990 80801077 -22693897 - PB1D10 SINE Alu -6 111 17 7 1201 341 205 18 114 chr15 80801206 80801329 -22693645 + PB1D7 SINE Alu 22 139 -11 7 1201 189 0 0 0 chr15 80801436 80801457 -22693517 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1201 733 77 86 0 chr15 80801457 80801574 -22693400 - B1_Mus1 SINE Alu 0 148 22 7 1201 444 364 50 18 chr15 80801569 80801790 -22693184 - B4A SINE B4 -28 264 37 7 1201 1293 246 65 56 chr15 80801790 80802346 -22692628 - RLTR18B LTR ERVK 0 616 70 7 1201 2325 73 19 3 chr15 80802320 80802634 -22692340 - ORR1A2 LTR MaLR -8 319 1 7 1201 485 170 53 11 chr15 80802634 80802728 -22692246 - RLTR18B LTR ERVK -408 104 7 7 1201 716 228 128 24 chr15 80802769 80802980 -22691994 - B4A SINE B4 -58 234 2 7 1201 516 227 36 9 chr15 80803281 80803392 -22691582 + ID_B1 SINE B4 9 122 -102 7 1201 432 0 0 0 chr15 80803422 80803470 -22691504 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1201 476 225 196 30 chr15 80803488 80803621 -22691353 + RSINE1 SINE B4 11 165 0 7 1201 25 0 0 0 chr15 80803639 80803664 -22691310 + AT_rich Low_complexity Low_complexity 1 25 0 7 1201 669 183 15 80 chr15 80804000 80804137 -22690837 - B1_Mur2 SINE Alu -9 140 13 7 1201 480 290 45 6 chr15 80804281 80804437 -22690537 + RSINE1 SINE B4 2 163 -2 7 1201 471 240 89 50 chr15 80804454 80804634 -22690340 - B2_Mm2 SINE B2 -8 187 1 7 1201 21 36 0 0 chr15 80805202 80805230 -22689744 + AT_rich Low_complexity Low_complexity 1 28 0 7 1201 1351 74 23 0 chr15 80805240 80805416 -22689558 + B2_Mm2 SINE B2 2 181 -14 7 1201 452 62 5 26 chr15 80805429 80805544 -22689430 + B2_Mm2 SINE B2 47 194 -1 7 1201 252 114 0 0 chr15 80805551 80805586 -22689388 + ID_B1 SINE B4 171 205 -19 7 1201 378 0 0 0 chr15 80805589 80805631 -22689343 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1201 396 235 37 101 chr15 80805650 80805759 -22689215 + PB1D10 SINE Alu 21 122 -27 7 1201 783 146 73 0 chr15 80805771 80805908 -22689066 - B1_Mur3 SINE Alu -2 147 1 7 1201 512 278 8 8 chr15 80806252 80806386 -22688588 + B1_Mur1 SINE Alu 1 134 -15 7 1201 1227 41 0 13 chr15 80806402 80806551 -22688423 + B1_Mus1 SINE Alu 1 147 -1 7 1201 212 55 35 53 chr15 80806551 80806608 -22688366 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 7 1201 755 197 147 42 chr15 80806627 80806818 -22688156 + B3 SINE B2 1 211 -5 7 1201 509 319 68 34 chr15 80807211 80807445 -22687529 + RMER15 LTR ERVL 324 565 -10 7 1201 204 67 0 0 chr15 80808846 80808876 -22686098 + (TTTTTG)n Simple_repeat Simple_repeat 5 34 0 7 1201 249 33 0 0 chr15 80808921 80808951 -22686023 + (TCTG)n Simple_repeat Simple_repeat 3 32 0 7 1201 432 245 13 12 chr15 80808968 80809073 -22685901 - B1_Mm SINE Alu -6 111 6 7 1201 205 138 0 0 chr15 80809280 80809309 -22685665 + (CTG)n Simple_repeat Simple_repeat 1 29 0 7 1201 511 271 85 0 chr15 80809438 80809615 -22685359 - B3A SINE B2 -5 193 2 7 1201 273 325 51 26 chr15 80809626 80809743 -22685231 - ID_B1 SINE B4 -19 205 86 7 1201 432 280 73 18 chr15 80809638 80809747 -22685227 - B1F2 SINE Alu -34 115 1 7 1201 183 328 111 30 chr15 80810551 80810686 -22684288 - MIRb SINE MIR -121 147 2 7 1201 281 326 43 0 chr15 80810698 80810790 -22684184 - ID_B1 SINE B4 -59 165 70 7 1201 216 258 182 0 chr15 80810825 80810891 -22684083 + ID4_ SINE ID 6 83 0 7 1201 346 239 28 0 chr15 80810947 80811018 -22683956 - ID4 SINE ID -6 77 5 7 1201 798 188 0 32 chr15 80811031 80811185 -22683789 - B1_Mur3 SINE Alu 0 149 1 7 1201 742 265 69 20 chr15 80811224 80811428 -22683546 + ID_B1 SINE B4 2 215 -9 7 1201 199 256 0 0 chr15 80811857 80811896 -22683078 + L2c LINE L2 3287 3325 -62 7 1201 726 185 0 56 chr15 80812272 80812415 -22682559 - B1_Mur4 SINE Alu -12 138 4 7 1201 1430 60 33 0 chr15 80812427 80812611 -22682363 - B2_Mm1t SINE B2 -2 191 2 7 1201 207 125 0 0 chr15 80812611 80812651 -22682323 + (T)n Simple_repeat Simple_repeat 1 40 0 7 1201 728 199 19 82 chr15 80812652 80812756 -22682218 - B1_Mur1 SINE Alu 0 149 54 7 1201 1496 52 5 20 chr15 80812756 80812951 -22682023 - B2_Mm1t SINE B2 -1 192 1 7 1201 728 199 19 82 chr15 80812951 80813005 -22681969 - B1_Mur1 SINE Alu -96 53 1 7 1201 557 317 14 0 chr15 80813058 80813203 -22681771 - ID_B1 SINE B4 0 224 78 7 1201 571 202 12 5 chr15 80813213 80813328 -22681646 - PB1D10 SINE Alu -27 121 8 7 1201 340 238 53 71 chr15 80813230 80813343 -22681631 - MT2B LTR ERVL -339 262 152 7 1201 486 200 43 52 chr15 80813490 80813606 -22681368 + PB1 SINE Alu 11 125 -2 7 1201 238 276 290 8 chr15 80813920 80814044 -22680930 + RSINE1 SINE B4 1 159 -6 7 1201 256 200 0 24 chr15 80814125 80814207 -22680767 + CT-rich Low_complexity Low_complexity 2 81 0 7 1201 777 83 0 0 chr15 80814222 80814330 -22680644 - B1_Mur4 SINE Alu 0 150 43 7 1201 728 119 0 154 chr15 80814330 80814538 -22680436 + (TCTCTG)n Simple_repeat Simple_repeat 1 176 0 7 1201 522 225 0 0 chr15 80814573 80814751 -22680223 + CT-rich Low_complexity Low_complexity 2 179 0 7 1201 268 243 27 0 chr15 80814751 80814825 -22680149 + (CCTG)n Simple_repeat Simple_repeat 2 77 0 7 1201 294 133 0 77 chr15 80814826 80814891 -22680083 - B1_Mus1 SINE Alu -88 60 1 7 1201 321 299 48 58 chr15 80815061 80815164 -22679810 + PB1D7 SINE Alu 12 113 -7 7 1201 947 219 5 38 chr15 80815173 80815358 -22679616 - B3 SINE B2 -11 205 27 7 1201 206 62 0 30 chr15 80815358 80815391 -22679583 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 7 1201 540 176 107 137 chr15 80815404 80815601 -22679373 - B2_Mm2 SINE B2 0 195 5 7 1201 618 14 0 0 chr15 80815601 80815672 -22679302 + (TTTC)n Simple_repeat Simple_repeat 4 74 0 7 1201 1292 42 72 0 chr15 80815672 80815839 -22679135 - B2_Mm2 SINE B2 -15 180 2 7 1201 26 0 0 0 chr15 80815839 80815865 -22679109 + AT_rich Low_complexity Low_complexity 1 26 0 7 1201 522 226 204 143 chr15 80815866 80816020 -22678954 - B3 SINE B2 -8 208 41 8 1201 1059 72 65 0 chr15 80816020 80816159 -22678815 - B1_Mus1 SINE Alu 0 148 1 8 1201 522 226 204 143 chr15 80816159 80816200 -22678774 - B3 SINE B2 -176 40 1 8 1201 851 303 53 50 chr15 80816244 80816563 -22678411 - MLT1G3 LTR MaLR -221 374 49 8 1201 1174 93 64 21 chr15 80816563 80816750 -22678224 + B2_Mm2 SINE B2 1 195 0 8 1201 851 303 53 50 chr15 80816750 80816791 -22678183 - MLT1G3 LTR MaLR -547 48 13 8 1201 831 126 72 22 chr15 80816802 80816940 -22678034 + B1_Mur3 SINE Alu 5 149 0 8 1201 486 192 111 0 chr15 80817123 80817222 -22677752 + PB1D9 SINE Alu 1 110 -10 8 1201 234 257 92 31 chr15 80817233 80817342 -22677632 - MIRc SINE MIR -126 142 29 8 1201 1380 88 5 15 chr15 80817534 80817731 -22677243 - B2_Mm2 SINE B2 0 195 1 8 1201 867 243 23 32 chr15 80817889 80818106 -22676868 + B3 SINE B2 2 216 0 8 1201 299 268 42 0 chr15 80818132 80818203 -22676771 + RSINE1 SINE B4 54 127 -38 8 1201 806 236 140 19 chr15 80818244 80818441 -22676533 + B4A SINE B4 2 223 -69 8 1201 597 257 130 65 chr15 80818441 80818475 -22676499 + B3 SINE B2 3 36 -180 8 1201 1446 50 44 0 chr15 80818475 80818655 -22676319 - B2_Mm2 SINE B2 -7 188 1 8 1201 597 257 130 65 chr15 80818655 80818820 -22676154 + B3 SINE B2 37 215 -1 8 1201 203 184 0 0 chr15 80819019 80819057 -22675917 + T-rich Low_complexity Low_complexity 1 38 0 8 1201 449 256 47 16 chr15 80819060 80819187 -22675787 - ID_B1 SINE B4 -1 223 93 8 1201 372 209 46 46 chr15 80819552 80819670 -22675304 + B1_Mur2 SINE Alu 1 117 -32 8 1201 994 129 14 0 chr15 80819668 80819815 -22675159 + MTC LTR MaLR 273 421 0 8 1201 391 183 0 0 chr15 80819824 80819884 -22675090 - ID_B1 SINE B4 -58 166 107 8 1201 318 26 0 0 chr15 80820833 80820872 -22674102 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1201 438 225 207 0 chr15 80820883 80820994 -22673980 - B1_Mur3 SINE Alu -14 135 2 8 1201 743 159 114 0 chr15 80821156 80821288 -22673686 + B1_Mur3 SINE Alu 1 147 -2 8 1201 230 288 53 26 chr15 80821339 80821448 -22673526 - B4 SINE B4 -174 118 3 8 1201 917 89 30 0 chr15 80821485 80821620 -22673354 - B2_Mm2 SINE B2 0 195 57 8 1201 21 0 0 0 chr15 80821631 80821652 -22673322 + AT_rich Low_complexity Low_complexity 1 21 0 8 1201 1149 54 0 20 chr15 80821664 80821814 -22673160 + B1_Mus2 SINE Alu 1 147 0 8 1201 1486 45 6 0 chr15 80821831 80822007 -22672967 + B2_Mm1a SINE B2 1 177 -16 8 1201 1458 64 43 0 chr15 80822055 80822242 -22672732 + B2_Mm2 SINE B2 1 195 0 8 1201 826 182 7 0 chr15 80822252 80822389 -22672585 + B1_Mur4 SINE Alu 6 143 -7 8 1201 1015 218 15 10 chr15 80822391 80822595 -22672379 - B3 SINE B2 0 216 12 8 1201 483 282 38 15 chr15 80822605 80822738 -22672236 - B1F SINE Alu 0 149 14 8 1201 830 270 58 13 chr15 80822758 80822983 -22671991 + B4A SINE B4 3 237 -55 8 1201 884 225 11 33 chr15 80822989 80823173 -22671801 + B3 SINE B2 31 210 -6 8 1201 363 44 0 0 chr15 80823257 80823302 -22671672 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 1201 675 176 34 34 chr15 80823403 80823550 -22671424 - B1_Mur3 SINE Alu -2 147 1 8 1201 1912 157 96 57 chr15 80823655 80824060 -22670914 + MTC LTR MaLR 1 421 0 8 1201 311 282 38 25 chr15 80824619 80824699 -22670275 - B4A SINE B4 -2 290 210 8 1201 447 231 48 32 chr15 80824704 80824829 -22670145 - MTD LTR MaLR -292 127 1 8 1201 1589 44 0 0 chr15 80824997 80825179 -22669795 + B2_Mm1t SINE B2 1 182 -11 8 1201 189 0 0 0 chr15 80825179 80825200 -22669774 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 8 1201 1240 48 0 0 chr15 80825229 80825374 -22669600 + B1_Mus2 SINE Alu 2 146 -1 8 1201 275 247 31 92 chr15 80825424 80825522 -22669452 - ID_B1 SINE B4 -79 145 54 8 1201 438 218 173 43 chr15 80825584 80825635 -22669339 - RSINE1 SINE B4 -6 159 106 8 1201 809 129 57 7 chr15 80825635 80825775 -22669199 - B1_Mus1 SINE Alu 0 148 2 8 1201 438 218 173 43 chr15 80825775 80825862 -22669112 - RSINE1 SINE B4 -60 105 3 8 1201 616 206 20 66 chr15 80826050 80826201 -22668773 - ID_B1 SINE B4 0 224 81 8 1201 350 180 138 53 chr15 80826391 80826485 -22668489 - B3 SINE B2 -85 131 30 8 1201 583 168 61 17 chr15 80826457 80826572 -22668402 - B3 SINE B2 -96 120 1 8 1201 333 277 30 105 chr15 80826599 80826732 -22668242 + MT2B LTR ERVL 144 266 -335 8 1201 685 229 21 21 chr15 80826630 80826773 -22668201 + B1_Mur1 SINE Alu 7 149 0 8 1201 389 168 0 82 chr15 80826899 80827023 -22667951 - L1Md_F3 LINE L1 0 6582 6471 8 1201 710 208 39 0 chr15 80827899 80828029 -22666945 - B1_Mur2 SINE Alu -8 141 7 8 1201 374 226 25 102 chr15 80827926 80828044 -22666930 - MT2B LTR ERVL -337 264 156 8 1201 836 238 67 5 chr15 80828055 80828249 -22666725 + B3 SINE B2 1 206 -10 8 1201 917 257 16 0 chr15 80828284 80828471 -22666503 - B3 SINE B2 -7 209 20 8 1201 692 199 49 21 chr15 80828497 80828641 -22666333 + B1_Mur2 SINE Alu 2 149 0 8 1201 398 229 68 113 chr15 80828775 80828908 -22666066 + PB1 SINE Alu 1 127 0 8 1201 387 283 26 9 chr15 80828953 80829067 -22665907 - PB1D10 SINE Alu 0 117 2 8 1201 595 190 15 0 chr15 80829115 80829252 -22665722 + CT-rich Low_complexity Low_complexity 2 140 0 8 1201 997 137 0 7 chr15 80829255 80829402 -22665572 - B1_Mur3 SINE Alu 0 149 4 8 1201 1026 66 58 14 chr15 80829420 80829559 -22665415 - B1_Mus2 SINE Alu -1 146 2 8 1201 25 0 0 0 chr15 80829564 80829589 -22665385 + AT_rich Low_complexity Low_complexity 1 25 0 8 1201 834 116 46 15 chr15 80829678 80829809 -22665165 + B1_Mur4 SINE Alu 12 146 -4 8 1201 623 192 112 0 chr15 80829809 80829934 -22665040 - B3 SINE B2 -12 204 66 8 1201 579 168 122 0 chr15 80831307 80831414 -22663560 - PB1D9 SINE Alu 0 120 1 8 1201 267 89 0 0 chr15 80831423 80831456 -22663518 + (T)n Simple_repeat Simple_repeat 1 33 0 8 1201 1608 32 27 0 chr15 80831456 80831644 -22663330 - B2_Mm1t SINE B2 0 193 1 8 1201 267 89 0 0 chr15 80831644 80831655 -22663319 + (T)n Simple_repeat Simple_repeat 1 11 0 8 1201 1073 78 35 14 chr15 80831655 80831799 -22663175 - B1_Mus2 SINE Alu 0 147 1 8 1201 625 256 83 0 chr15 80831854 80832022 -22662952 - B3A SINE B2 -16 182 1 8 1201 244 197 355 0 chr15 80832038 80832114 -22662860 - PB1D10 SINE Alu -6 111 9 8 1201 325 333 27 54 chr15 80832072 80832183 -22662791 - ID_B1 SINE B4 -90 134 27 8 1201 318 275 102 34 chr15 80832185 80832332 -22662642 - L1M4 LINE L1 -690 5484 5328 8 1201 877 240 38 0 chr15 80832337 80832520 -22662454 - B3 SINE B2 -25 191 2 8 1201 1611 27 21 0 chr15 80832753 80832940 -22662034 + B2_Mm1a SINE B2 1 191 -2 8 1201 375 23 0 0 chr15 80833567 80833611 -22661363 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 8 1201 567 184 112 67 chr15 80833612 80833746 -22661228 - B1_Mur1 SINE Alu -7 142 3 8 1201 911 168 0 20 chr15 80834473 80834625 -22660349 - B1_Mur3 SINE Alu 0 149 1 8 1201 1418 65 11 11 chr15 80834666 80834853 -22660121 - B2_Mm1t SINE B2 -5 188 2 8 1201 274 138 0 159 chr15 80834954 80835023 -22659951 + B1_Mus2 SINE Alu 89 149 -1 8 1201 1420 78 6 6 chr15 80835149 80835309 -22659665 + B2_Mm1t SINE B2 1 160 -33 8 1201 192 77 0 0 chr15 80835309 80835335 -22659639 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 8 1201 1420 78 6 6 chr15 80835335 80835355 -22659619 + B2_Mm1t SINE B2 161 181 -12 8 1201 707 163 85 0 chr15 80835414 80835543 -22659431 - B1_Mur2 SINE Alu 0 149 10 8 1201 302 194 71 88 chr15 80835449 80835562 -22659412 - MT2B LTR ERVL -337 264 154 8 1201 261 119 0 0 chr15 80838605 80838647 -22656327 + (TTCCC)n Simple_repeat Simple_repeat 3 44 0 8 1201 238 252 192 10 chr15 80844485 80844589 -22650385 + L1M3 LINE L1 5314 5436 -744 8 1201 234 0 0 0 chr15 80845601 80845627 -22649347 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 1201 469 252 35 26 chr15 80846026 80846140 -22648834 - RSINE1 SINE B4 -4 161 47 8 1201 240 35 0 0 chr15 80848679 80848708 -22646266 + (CTG)n Simple_repeat Simple_repeat 1 29 0 8 1201 550 293 73 7 chr15 80850217 80850368 -22644606 - RSINE1 SINE B4 -2 163 3 8 1201 180 0 0 0 chr15 80850746 80850766 -22644208 + (GGGA)n Simple_repeat Simple_repeat 1 20 0 8 1201 1248 48 0 0 chr15 80853619 80853765 -22641209 + B1_Mus2 SINE Alu 2 147 0 8 1201 249 57 0 0 chr15 80853765 80853800 -22641174 + (A)n Simple_repeat Simple_repeat 1 35 0 8 1201 211 229 0 0 chr15 80855456 80855504 -22639470 + (TA)n Simple_repeat Simple_repeat 2 49 0 8 1201 313 226 0 215 chr15 80855517 80855577 -22639397 + RSINE1 SINE B4 53 98 -67 8 1201 1740 21 0 0 chr15 80855577 80855769 -22639205 - B2_Mm1t SINE B2 0 193 2 8 1201 313 226 0 215 chr15 80855769 80855815 -22639159 + RSINE1 SINE B4 99 136 -29 8 1201 369 0 0 0 chr15 80855820 80855861 -22639113 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 1201 204 250 0 0 chr15 80855886 80855926 -22639048 + MIRc SINE MIR 48 87 -181 8 1201 374 257 75 94 chr15 80855952 80855971 -22639003 + B4 SINE B4 68 83 -209 8 1201 840 71 55 41 chr15 80855971 80856117 -22638857 + B1_Mus2 SINE Alu 3 150 0 8 1201 384 40 0 0 chr15 80856189 80856239 -22638735 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 1201 260 240 67 0 chr15 80857182 80857257 -22637717 + ID4_ SINE ID 1 80 -3 8 1201 180 0 0 0 chr15 80858464 80858484 -22636490 + (TC)n Simple_repeat Simple_repeat 1 20 0 9 1201 888 179 0 0 chr15 80859173 80859318 -22635656 - B1_Mus1 SINE Alu -2 146 2 9 1201 788 189 15 0 chr15 80859341 80859473 -22635501 + B1_Mur2 SINE Alu 2 135 -14 9 1201 1699 42 0 5 chr15 80859997 80860210 -22634764 - L1Md_F2 LINE L1 0 6582 6371 9 1201 344 250 34 0 chr15 80860222 80860310 -22634664 - B1F1 SINE Alu -58 91 1 9 1201 218 318 136 68 chr15 80860361 80860523 -22634451 + B4A SINE B4 2 174 -118 9 1201 1021 179 111 34 chr15 80860562 80860770 -22634204 + URR1B DNA MER1_type 2 225 0 9 1201 1172 192 29 0 chr15 80862909 80863117 -22631857 - B3 SINE B2 -2 214 1 9 1201 399 240 31 0 chr15 80863158 80863254 -22631720 - RSINE1 SINE B4 -56 109 11 9 1201 554 235 69 138 chr15 80863263 80863510 -22631464 + MTD LTR MaLR 5 234 -145 9 1201 567 0 0 0 chr15 80863885 80863948 -22631026 + (TC)n Simple_repeat Simple_repeat 1 63 0 9 1201 737 229 30 0 chr15 80865134 80865300 -22629674 - ID_B1 SINE B4 -53 171 1 9 1201 189 366 80 0 chr15 80865362 80865474 -22629500 + MIR SINE MIR 13 133 -129 9 1201 364 216 157 67 chr15 80865955 80866089 -22628885 + B4 SINE B4 9 154 -138 9 1201 701 269 47 6 chr15 80866501 80866673 -22628301 + B3 SINE B2 32 210 -6 9 1201 286 307 0 13 chr15 80866805 80866881 -22628093 - B4A SINE B4 -4 288 214 9 1201 556 308 42 26 chr15 80866908 80866957 -22628017 - B3A SINE B2 -2 196 148 9 1201 267 31 0 0 chr15 80866957 80866989 -22627985 + (CA)n Simple_repeat Simple_repeat 2 33 0 9 1201 556 308 42 26 chr15 80866989 80867129 -22627845 - B3A SINE B2 -51 147 4 9 1201 253 256 63 13 chr15 80867357 80867436 -22627538 - B4A SINE B4 -142 150 68 9 1201 1206 57 0 0 chr15 80867569 80867728 -22627246 + B2_Mm1a SINE B2 2 160 -33 9 1201 315 0 0 0 chr15 80867728 80867763 -22627211 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 9 1201 662 87 0 10 chr15 80867879 80867983 -22626991 + (CA)n Simple_repeat Simple_repeat 2 104 0 9 1201 226 261 14 28 chr15 80868150 80868221 -22626753 - B1F1 SINE Alu 0 149 80 9 1201 25 31 0 0 chr15 80868316 80868348 -22626626 + AT_rich Low_complexity Low_complexity 1 32 0 9 1201 544 239 0 0 chr15 80868370 80868479 -22626495 + B1_Mur1 SINE Alu 1 109 -40 9 1201 497 240 93 7 chr15 80868505 80868656 -22626318 + RSINE1 SINE B4 2 165 0 9 1201 667 190 73 0 chr15 80868677 80868814 -22626160 - B1_Mur3 SINE Alu -1 148 2 9 1201 234 95 31 31 chr15 80869349 80869414 -22625560 + (CAAA)n Simple_repeat Simple_repeat 3 67 0 9 1201 876 237 80 15 chr15 80869850 80870051 -22624923 + B3 SINE B2 3 216 0 9 1201 532 105 0 0 chr15 80870072 80870148 -22624826 + U4 snRNA snRNA 1 76 -69 9 1201 1157 49 7 0 chr15 80870444 80870586 -22624388 - B1_Mm SINE Alu 0 147 5 9 1201 457 282 46 13 chr15 80871003 80871154 -22623820 + RSINE1 SINE B4 10 165 0 9 1201 303 113 14 27 chr15 80871154 80871227 -22623747 + (CA)n Simple_repeat Simple_repeat 1 72 0 9 150 719 133 5 31 chr15 80871241 80871916 -22623058 + (CA)n Simple_repeat Simple_repeat 1 657 0 9 1202 332 113 38 0 chr15 80871941 80871994 -22622980 + HAL1-3A_ME LINE L1 1977 2031 -827 9 1202 280 250 59 0 chr15 80871997 80872065 -22622909 + ID SINE ID 4 75 -149 9 1202 336 250 129 11 chr15 80874432 80874525 -22620449 - PB1D7 SINE Alu 0 120 17 9 1202 1258 35 0 0 chr15 80874587 80874732 -22620242 - B1_Mm SINE Alu -2 145 1 9 1202 225 0 0 0 chr15 80874995 80875020 -22619954 + (TG)n Simple_repeat Simple_repeat 1 25 0 9 1202 25 0 0 0 chr15 80877101 80877126 -22617848 + AT_rich Low_complexity Low_complexity 1 25 0 9 1202 421 263 16 48 chr15 80877135 80877259 -22617715 + PB1D7 SINE Alu 1 120 0 9 1202 265 233 7 21 chr15 80877309 80877378 -22617596 + PB1D10 SINE Alu 32 100 -49 9 1202 822 147 0 0 chr15 80877377 80877506 -22617468 + B1_Mus2 SINE Alu 13 141 -6 9 1202 350 272 68 81 chr15 80877378 80877526 -22617448 + B4A SINE B4 99 244 -48 9 1202 207 162 0 0 chr15 80877529 80877566 -22617408 + GA-rich Low_complexity Low_complexity 2 38 0 9 1202 299 338 99 27 chr15 80877689 80877745 -22617229 - MIR SINE MIR -3 259 203 9 1202 417 66 0 0 chr15 80877745 80877806 -22617168 + (TG)n Simple_repeat Simple_repeat 1 61 0 9 1202 314 257 68 0 chr15 80877809 80877883 -22617091 - ID4 SINE ID -3 80 2 9 1202 299 338 99 27 chr15 80877883 80878044 -22616930 - MIR SINE MIR -60 202 26 9 1202 1737 41 0 14 chr15 80878377 80878598 -22616376 - L1Md_F2 LINE L1 0 6582 6365 9 1202 882 214 68 0 chr15 80879195 80879387 -22615587 - B3 SINE B2 -3 213 9 9 1202 449 238 126 8 chr15 80879695 80879801 -22615173 + RSINE1 SINE B4 16 127 -38 9 1202 354 61 0 0 chr15 80879801 80879850 -22615124 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 9 1202 449 238 126 8 chr15 80879850 80879870 -22615104 + RSINE1 SINE B4 128 157 -8 9 1202 762 189 217 0 chr15 80880222 80880397 -22614577 + B3 SINE B2 4 216 0 9 1202 667 248 129 20 chr15 80880422 80880624 -22614350 + ID_B1 SINE B4 1 224 0 9 1202 20978 120 22 3 chr15 80881021 80884106 -22610868 + MERVL_2A-int LTR ERVL 1580 4723 -1038 9 1202 1102 105 93 0 chr15 80884106 80884268 -22610706 + B2_Mm1t SINE B2 3 179 -14 9 1202 361 100 293 106 chr15 80884315 80884438 -22610536 + B2_Mm2 SINE B2 47 192 -3 9 1202 4793 154 62 6 chr15 80884438 80885305 -22609669 + MERVL_2A-int LTR ERVL 4714 5629 -132 9 1202 381 137 13 40 chr15 80885305 80885381 -22609593 + ORR1A3-int LTR MaLR 567 640 -1323 9 1202 4473 81 5 10 chr15 80885419 80886006 -22608968 + MT2B2 LTR ERVL 1 584 0 9 1202 1091 294 68 48 chr15 80886181 80886596 -22608378 + Lx8 LINE L1 6251 6673 -800 9 1202 1741 225 100 8 chr15 80886608 80887078 -22607896 + Lx8 LINE L1 6713 7225 -248 9 1202 645 179 58 22 chr15 80887416 80887553 -22607421 - B1_Mur1 SINE Alu -2 147 6 9 1202 777 226 10 67 chr15 80887592 80887754 -22607220 - B3A SINE B2 -1 197 45 9 1202 2413 159 58 8 chr15 80887754 80888153 -22606821 - MTD LTR MaLR 0 419 1 9 1202 777 226 10 67 chr15 80888153 80888199 -22606775 - B3A SINE B2 -154 44 1 9 1202 236 310 24 12 chr15 80888251 80888336 -22606638 + GA-rich Low_complexity Low_complexity 1 86 0 9 1202 287 150 0 16 chr15 80888343 80888404 -22606570 + (CAGGG)n Simple_repeat Simple_repeat 3 62 0 9 1202 422 235 172 24 chr15 80888876 80889085 -22605889 + L1MD3 LINE L1 7755 7994 -1 9 1202 1074 199 14 9 chr15 80889098 80889311 -22605663 + B3 SINE B2 2 215 -1 9 1202 294 295 126 0 chr15 80889933 80890079 -22604895 - MIRb SINE MIR -91 177 3 9 1202 295 258 153 23 chr15 80890558 80890689 -22604285 - MIRb SINE MIR -111 157 10 9 1202 345 311 43 29 chr15 80890778 80890917 -22604057 + RSINE1 SINE B4 9 149 -16 9 1202 297 0 0 0 chr15 80890918 80890951 -22604023 + (CA)n Simple_repeat Simple_repeat 2 34 0 9 1202 463 178 11 11 chr15 80891029 80891120 -22603854 + B1_Mur4 SINE Alu 60 150 0 9 1202 2663 152 22 5 chr15 80891124 80891527 -22603447 + Lx5 LINE L1 6498 6907 -143 9 1202 482 226 141 9 chr15 80892279 80892468 -22602506 - L1MA6 LINE L1 -6 6294 6079 9 1202 653 157 0 69 chr15 80893576 80893706 -22601268 - B1_Mus1 SINE Alu -21 127 7 9 1202 429 90 0 0 chr15 80894340 80894407 -22600567 + (CA)n Simple_repeat Simple_repeat 2 68 0 9 1202 216 0 0 0 chr15 80894883 80894907 -22600067 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 9 1202 267 325 8 49 chr15 80894999 80895122 -22599852 + RSINE1 SINE B4 48 165 0 9 1202 330 247 14 0 chr15 80895906 80895979 -22598995 - RMER30 DNA MER1_type -127 75 2 9 1202 1619 38 0 0 chr15 80897908 80898092 -22596882 + B2_Mm1a SINE B2 2 185 -8 9 1202 2209 141 60 11 chr15 80898371 80898737 -22596237 + ORR1C2 LTR MaLR 1 384 0 9 1202 1950 162 70 12 chr15 80898737 80899150 -22595824 + ORR1C2-int LTR MaLR 1 437 -1072 9 1202 489 178 24 48 chr15 80899128 80899252 -22595722 - MT2A LTR ERVL -329 204 84 9 1202 643 167 45 60 chr15 80899271 80899405 -22595569 - MT2A LTR ERVL -401 132 1 9 1202 1406 157 5 5 chr15 80899686 80899910 -22595064 + URR1A DNA MER1_type 1 224 -2 9 1202 2239 130 71 5 chr15 80900456 80900836 -22594138 - MTC LTR MaLR -9 412 8 9 1202 216 0 0 0 chr15 80901377 80901401 -22593573 + (A)n Simple_repeat Simple_repeat 1 24 0 9 1202 399 328 99 0 chr15 80901402 80901603 -22593371 + MIR SINE MIR 31 251 -11 9 1202 1213 80 74 11 chr15 80901968 80902144 -22592830 - B2_Mm2 SINE B2 -8 187 1 9 1202 522 299 7 27 chr15 80902149 80902297 -22592677 - RSINE1 SINE B4 -18 147 3 9 1202 751 181 34 27 chr15 80902559 80902707 -22592267 + B1_Mur1 SINE Alu 1 149 0 9 1202 327 227 121 20 chr15 80903107 80903206 -22591768 + PB1D10 SINE Alu 4 112 -5 9 1202 791 239 39 10 chr15 80903297 80903500 -22591474 - B3 SINE B2 -7 209 1 9 1202 520 134 62 0 chr15 80903585 80903682 -22591292 + B1_Mur4 SINE Alu 47 149 -1 9 1202 639 216 7 39 chr15 80904652 80904806 -22590168 + B1_Mur2 SINE Alu 1 149 0 9 1202 325 248 83 60 chr15 80904982 80905115 -22589859 + MLT1A1 LTR MaLR 268 403 -5 9 1202 948 197 11 6 chr15 80905260 80905439 -22589535 - B3 SINE B2 0 216 37 9 1202 2021 112 27 67 chr15 80905441 80905813 -22589161 - RMER4A LTR ERVK 0 466 110 9 1202 802 271 0 27 chr15 80906079 80906265 -22588709 + MTE2b LTR MaLR 154 334 -45 9 1202 1009 111 0 7 chr15 80906316 80906461 -22588513 - B1_Mur4 SINE Alu -2 148 5 9 1202 297 175 18 0 chr15 80906462 80906519 -22588455 + MTE2b LTR MaLR 322 379 0 9 1202 659 132 19 9 chr15 80906595 80906702 -22588272 + PB1D9 SINE Alu 4 111 -9 9 1202 296 266 62 27 chr15 80906769 80906881 -22588093 + L1M5 LINE L1 5427 5542 -637 9 1202 354 295 11 0 chr15 80906907 80907002 -22587972 - PB1D9 SINE Alu -7 113 18 9 1202 21 36 0 0 chr15 80907036 80907064 -22587910 + AT_rich Low_complexity Low_complexity 1 28 0 9 1202 232 253 38 51 chr15 80907250 80907266 -22587708 + ID_B1 SINE B4 134 211 -13 1 1202 269 238 16 0 chr15 80907266 80907329 -22587645 + B1F SINE Alu 73 136 -13 1 1202 210 208 0 0 chr15 80907410 80907458 -22587516 + GA-rich Low_complexity Low_complexity 6 53 0 1 1202 1283 73 73 0 chr15 80907553 80907731 -22587243 + B2_Mm2 SINE B2 1 191 -4 1 1202 604 284 22 43 chr15 80908113 80908297 -22586677 - B3A SINE B2 -18 180 1 1 1202 289 311 33 0 chr15 80908476 80908566 -22586408 + B1_Mur1 SINE Alu 55 147 -2 1 1202 217 231 167 15 chr15 80909016 80909082 -22585892 + AluG_3 SINE Alu 145 220 -91 1 1202 229 338 25 0 chr15 80909461 80909541 -22585433 + MER20 DNA MER1_type 4 85 -134 1 1202 223 177 81 81 chr15 80909643 80909729 -22585245 - MIR SINE MIR -92 170 85 1 1202 282 143 0 0 chr15 80910104 80910153 -22584821 + (TCCG)n Simple_repeat Simple_repeat 4 52 0 1 1202 431 224 187 19 chr15 80910282 80910437 -22584537 + B3A SINE B2 2 182 -16 1 1202 1068 49 0 0 chr15 80910803 80910945 -22584029 - B1_Mus2 SINE Alu 0 147 6 1 1202 1175 29 0 14 chr15 80911191 80911332 -22583642 + B1_Mus2 SINE Alu 1 139 -8 1 1202 180 0 0 0 chr15 80912019 80912039 -22582935 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1202 21 0 0 0 chr15 80913136 80913157 -22581817 + AT_rich Low_complexity Low_complexity 1 21 0 1 1202 207 0 0 0 chr15 80913407 80913430 -22581544 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1202 553 220 93 0 chr15 80913522 80913640 -22581334 - B1_Mur1 SINE Alu -19 130 2 1 1202 256 175 32 0 chr15 80914071 80914134 -22580840 + GA-rich Low_complexity Low_complexity 89 153 0 1 1202 825 215 63 24 chr15 80914763 80914917 -22580057 + B3 SINE B2 1 163 -53 1 1202 243 0 0 0 chr15 80914917 80914944 -22580030 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 1202 825 215 63 24 chr15 80914944 80914994 -22579980 + B3 SINE B2 164 213 -3 1 1202 304 269 0 0 chr15 80915313 80915380 -22579594 + B1F SINE Alu 2 68 -81 1 1202 906 171 0 0 chr15 80915413 80915559 -22579415 + B1_Mur2 SINE Alu 2 147 -2 1 1202 489 34 0 0 chr15 80915561 80915620 -22579354 + (GGAA)n Simple_repeat Simple_repeat 1 59 0 1 1202 399 286 208 0 chr15 80915644 80915822 -22579152 + B3 SINE B2 1 215 -1 1 1202 297 323 62 31 chr15 80915856 80915984 -22578990 + RSINE1 SINE B4 5 136 -29 1 1202 265 351 82 12 chr15 80916574 80916744 -22578230 + RMER15 LTR ERVL 377 558 -17 1 1202 369 288 82 74 chr15 80918413 80918548 -22576426 - B1_Mur1 SINE Alu -5 144 9 1 1202 230 278 78 147 chr15 80918992 80919093 -22575881 + B4 SINE B4 44 187 -105 1 1202 405 174 103 11 chr15 80919093 80919180 -22575794 + B1_Mur1 SINE Alu 44 138 -11 1 1202 230 278 78 147 chr15 80919180 80919237 -22575737 + B4 SINE B4 188 271 -21 1 1202 429 157 33 11 chr15 80919253 80919343 -22575631 - B1_Mur4 SINE Alu -56 94 3 1 1202 262 263 0 26 chr15 80919276 80919354 -22575620 - B4 SINE B4 -140 152 77 1 1202 1203 61 0 0 chr15 80919390 80919537 -22575437 + B1_Mus1 SINE Alu 1 147 -1 1 1202 902 218 16 0 chr15 80919579 80919772 -22575202 + B3 SINE B2 21 216 0 1 1202 690 155 0 52 chr15 80920070 80920206 -22574768 - B1_Mus1 SINE Alu -1 147 19 1 1202 390 74 0 0 chr15 80920719 80920773 -22574201 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1202 324 282 10 0 chr15 80920898 80921001 -22573973 + MIR SINE MIR 92 195 -67 1 1202 258 260 12 72 chr15 80921049 80921132 -22573842 + MER21B LTR ERV1 12 89 -774 1 1202 237 333 87 22 chr15 80921272 80921303 -22573671 + B4A SINE B4 49 85 -207 1 1202 364 315 0 0 chr15 80921303 80921392 -22573582 + PB1D10 SINE Alu 1 89 -28 1 1202 996 305 93 43 chr15 80921395 80921857 -22573117 + MER21B LTR ERV1 222 706 -157 1 1202 198 0 0 0 chr15 80921998 80922020 -22572954 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1 1202 1166 48 7 13 chr15 80922021 80922170 -22572804 - B1_Mus1 SINE Alu 0 148 1 1 1202 300 220 220 0 chr15 80923130 80923221 -22571753 - PB1 SINE Alu -2 125 15 1 1202 492 253 87 146 chr15 80923310 80923491 -22571483 - L1MB7 LINE L1 -159 6025 5862 1 1202 884 214 54 19 chr15 80923491 80923696 -22571278 - B3 SINE B2 0 216 5 1 1202 492 253 87 146 chr15 80923696 80923884 -22571090 - L1MB7 LINE L1 -323 5861 5678 1 1202 730 231 12 30 chr15 80923885 80924050 -22570924 - RSINE1 SINE B4 -1 164 3 1 1202 403 180 152 9 chr15 80924056 80924168 -22570806 - L1MB7 LINE L1 -484 5700 5573 1 1202 270 78 37 56 chr15 80924177 80924231 -22570743 - L1MD1 LINE L1 -5 6237 6185 1 1202 296 250 53 14 chr15 80924410 80924508 -22570466 + B1_Mur3 SINE Alu 2 109 -18 1 1202 978 161 0 7 chr15 80924645 80924795 -22570179 - B1_Mur4 SINE Alu 0 150 2 1 1202 541 254 134 75 chr15 80924818 80925005 -22569969 - B3A SINE B2 0 198 1 1 1202 48 0 0 32 chr15 80925014 80925036 -22569938 + AT_rich Low_complexity Low_complexity 1 22 0 1 1202 1054 200 46 10 chr15 80925036 80925233 -22569741 + B3 SINE B2 2 205 -11 1 1202 48 0 0 32 chr15 80925233 80925273 -22569701 + AT_rich Low_complexity Low_complexity 1 39 0 1 1202 480 336 121 14 chr15 80925424 80925937 -22569037 - L1ME2 LINE L1 -230 5934 5351 1 1202 576 256 8 8 chr15 80926064 80926194 -22568780 + ID_B1 SINE B4 79 208 -16 1 1202 495 206 27 27 chr15 80926406 80926429 -22568545 + ID SINE ID 59 81 -143 1 1202 394 265 19 29 chr15 80926429 80926534 -22568440 + PB1D10 SINE Alu 3 106 -11 1 1202 462 305 94 20 chr15 80927237 80927438 -22567536 - ID_B1 SINE B4 -8 216 1 1 1202 539 290 6 47 chr15 80927685 80927855 -22567119 - RSINE1 SINE B4 0 165 3 1 1202 375 290 73 17 chr15 80928339 80928518 -22566456 - Charlie1b DNA MER1_type -327 196 8 1 1202 261 260 9 80 chr15 80928584 80928697 -22566277 + L1M2 LINE L1 5712 5816 -481 1 1202 574 240 131 113 chr15 80928710 80928992 -22565982 + B4A SINE B4 2 288 -4 1 1202 225 0 0 0 chr15 80929048 80929073 -22565901 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 1202 240 244 25 13 chr15 80929076 80929155 -22565819 + Lx7 LINE L1 5790 5869 -1827 1 1202 341 187 0 13 chr15 80930128 80930204 -22564770 + CT-rich Low_complexity Low_complexity 3 77 0 1 1202 1305 73 6 22 chr15 80930204 80930228 -22564746 - B2_Mm2 SINE B2 -17 178 157 1 1202 189 0 0 0 chr15 80930228 80930249 -22564725 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 1202 1305 73 6 22 chr15 80930249 80930405 -22564569 - B2_Mm2 SINE B2 -39 156 1 1 1202 661 264 0 0 chr15 80930442 80930582 -22564392 - RSINE1 SINE B4 -21 144 5 1 1202 495 228 53 30 chr15 80930594 80930725 -22564249 - B1F SINE Alu -6 143 10 1 1202 609 211 35 7 chr15 80931538 80931681 -22563293 - B1_Mur2 SINE Alu -1 148 2 1 1202 1465 166 226 80 chr15 80937183 80937648 -22557326 + MT2A LTR ERVL 1 533 0 1 1202 234 62 0 0 chr15 80939923 80939955 -22555019 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 1 1202 278 279 49 1 chr15 80939958 80940051 -22554923 - B1F SINE Alu -13 107 12 1 1202 1636 16 21 0 chr15 80940287 80940475 -22554499 - B2_Mm1a SINE B2 0 193 2 1 1202 207 0 0 0 chr15 80941932 80941955 -22553019 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1202 226 198 11 69 chr15 80942171 80942199 -22552775 + (TCTA)n Simple_repeat Simple_repeat 1 29 0 1 1202 669 197 15 0 chr15 80942199 80942336 -22552638 - B1_Mur3 SINE Alu -10 139 1 1 1202 226 198 11 69 chr15 80942336 80942394 -22552580 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 1 1202 1125 132 142 0 chr15 80942847 80943044 -22551930 + URR1A DNA MER1_type 2 226 0 1 1202 441 18 0 0 chr15 80943610 80943665 -22551309 - ORR1A1 LTR MaLR 0 346 292 1 1202 348 284 229 19 chr15 80943680 80944202 -22550772 + L1M4 LINE L1 2133 2763 -3383 1 1202 273 270 0 0 chr15 80944207 80944219 -22550755 + B4A SINE B4 74 85 -207 1 1202 289 217 33 0 chr15 80944219 80944279 -22550695 + PB1D9 SINE Alu 1 62 -58 1 1202 1773 63 87 0 chr15 80944268 80944520 -22550454 - ORR1A0 LTR MaLR -43 303 30 1 1202 255 292 0 0 chr15 80945713 80945778 -22549196 + ID_B1 SINE B4 79 143 -81 1 1202 303 228 75 21 chr15 80945721 80945815 -22549159 + PB1D10 SINE Alu 6 104 -13 1 1202 497 165 20 30 chr15 80945913 80946013 -22548961 - ORR1C1 LTR MaLR -40 344 246 1 1202 555 140 11 0 chr15 80946010 80946103 -22548871 - ORR1C1 LTR MaLR -284 94 1 1 1202 630 185 12 88 chr15 80946112 80946240 -22548734 + B3 SINE B2 69 194 -22 1 1202 1493 59 11 0 chr15 80946240 80946426 -22548548 - B2_Mm1t SINE B2 -5 188 1 1 1202 1215 68 0 0 chr15 80946428 80946575 -22548399 - B1_Mus2 SINE Alu 0 147 1 1 1202 630 185 12 88 chr15 80946575 80946603 -22548371 + B3 SINE B2 195 216 0 1 1202 35 24 0 0 chr15 80946940 80946982 -22547992 + AT_rich Low_complexity Low_complexity 1 42 0 1 1202 263 279 0 0 chr15 80947017 80947078 -22547896 + Tigger5 DNA MER2_type 4 64 -2342 1 1202 1033 111 63 48 chr15 80947407 80947596 -22547378 - B2_Mm2 SINE B2 -3 192 1 1 1202 340 322 0 11 chr15 80948205 80948299 -22546675 - PB1D10 SINE Alu -10 107 15 1 1202 367 219 24 87 chr15 80949125 80949254 -22545720 + PB1 SINE Alu 5 120 -7 1 1202 232 267 51 51 chr15 80949369 80949448 -22545526 + ID4 SINE ID 3 81 -2 1 1202 400 161 0 0 chr15 80949560 80949622 -22545352 + B1_Mur4 SINE Alu 5 66 -84 1 1202 321 258 0 0 chr15 80949621 80949683 -22545291 - B3 SINE B2 -154 62 1 1 1202 746 175 58 14 chr15 80950121 80950260 -22544714 + B1_Mur2 SINE Alu 4 148 -1 1 1202 324 366 50 50 chr15 80950271 80950432 -22544542 + RSINE1 SINE B4 3 163 -2 1 1202 244 296 33 50 chr15 80950473 80950597 -22544377 + RSINE1 SINE B4 5 120 -172 1 1202 197 132 0 26 chr15 80950896 80950935 -22544039 + (CATA)n Simple_repeat Simple_repeat 4 41 0 1 1202 340 326 51 0 chr15 80950964 80951062 -22543912 + PB1 SINE Alu 2 104 -23 1 1202 226 0 0 56 chr15 80951805 80951841 -22543133 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1202 723 246 67 14 chr15 80951844 80952054 -22542920 - ID_B1 SINE B4 0 224 4 1 1202 727 187 28 41 chr15 80952111 80952256 -22542718 + B1_Mur4 SINE Alu 2 144 -6 1 1202 427 323 53 45 chr15 80952311 80952557 -22542417 + B4A SINE B4 43 290 -2 1 1202 189 0 0 0 chr15 80953045 80953066 -22541908 + (G)n Simple_repeat Simple_repeat 1 21 0 1 1202 291 161 18 0 chr15 80953701 80953757 -22541217 + B1F2 SINE Alu 1 57 -92 1 1202 22 35 0 0 chr15 80953868 80953897 -22541077 + AT_rich Low_complexity Low_complexity 1 29 0 1 1202 703 174 35 21 chr15 80953997 80954138 -22540836 + B1_Mur3 SINE Alu 7 149 0 1 1202 303 320 0 0 chr15 80954144 80954219 -22540755 + polypurine Low_complexity Low_complexity 4 78 0 1 1202 449 99 34 31 chr15 80954227 80954319 -22540655 + B1_Mur4 SINE Alu 27 150 0 1 1202 490 268 57 32 chr15 80954427 80954585 -22540389 + MLT1H1 LTR MaLR 1 162 -393 1 1202 342 298 19 9 chr15 80954593 80954698 -22540276 + PB1D10 SINE Alu 3 108 -9 1 1202 233 328 74 25 chr15 80954801 80954923 -22540051 + MLT1H1 LTR MaLR 299 426 -129 1 1202 741 203 0 7 chr15 80955075 80955214 -22539760 - ID_B1 SINE B4 -3 221 84 1 1202 300 182 73 0 chr15 80955943 80956022 -22538952 - B1F SINE Alu -1 148 23 1 1202 433 281 0 42 chr15 80956231 80956350 -22538624 - PB1D10 SINE Alu -1 116 3 1 1202 236 394 0 0 chr15 80957016 80957087 -22537887 + PB1 SINE Alu 27 97 -30 1 1202 204 284 72 72 chr15 80957148 80957273 -22537701 - L2a LINE L2 -9 3417 3254 1 1202 377 222 23 93 chr15 80957567 80957585 -22537389 + MT2B LTR ERVL 145 153 -448 1 1202 963 48 0 0 chr15 80957585 80957710 -22537264 + B1_Mus2 SINE Alu 2 126 -21 1 1202 274 262 234 18 chr15 80958032 80958199 -22536775 + B3 SINE B2 1 203 -13 1 1202 308 212 24 0 chr15 80959216 80959301 -22535673 + (TATATG)n Simple_repeat Simple_repeat 1 87 0 1 1202 484 212 8 58 chr15 80959315 80959435 -22535539 + PB1D9 SINE Alu 7 120 0 1 1202 188 262 62 0 chr15 80959596 80959676 -22535298 - MIR SINE MIR -73 189 105 1 1202 605 227 30 96 chr15 80961203 80961369 -22533605 - RSINE1 SINE B4 0 165 11 1 1202 476 335 7 20 chr15 80961408 80961560 -22533414 - RSINE1 SINE B4 -10 155 6 1 1202 396 306 26 45 chr15 80961786 80961940 -22533034 + RSINE1 SINE B4 3 153 -12 1 1202 279 200 0 0 chr15 80962371 80962421 -22532553 - B1_Mus1 SINE Alu -66 82 33 1 1202 250 224 0 82 chr15 80962476 80962549 -22532425 - ID4 SINE ID -15 68 2 1 1202 2781 60 5 3 chr15 80962668 80963050 -22531924 + MTA_Mm LTR MaLR 6 388 -8 1 1202 261 0 0 0 chr15 80963055 80963084 -22531890 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1202 798 232 22 12 chr15 80963315 80963546 -22531428 + RMER17C LTR ERVK 1 410 -399 1 1202 621 0 0 0 chr15 80963546 80963615 -22531359 + (TC)n Simple_repeat Simple_repeat 2 70 0 1 1202 241 323 47 31 chr15 80963615 80963639 -22531335 + RMER17C LTR ERVK 411 434 -375 1 1202 446 234 17 43 chr15 80963762 80963878 -22531096 + PB1D9 SINE Alu 1 113 -7 1 1202 2329 228 242 4 chr15 80963878 80964619 -22530355 + Lx4A LINE L1 6133 7049 -9 1 1202 1135 56 167 0 chr15 80964649 80964811 -22530163 + B2_Mm2 SINE B2 2 190 -5 1 1202 1139 88 0 0 chr15 80964842 80964989 -22529985 - B1_Mus1 SINE Alu 0 148 2 1 1202 3213 31 0 8 chr15 80965141 80965526 -22529448 + L1Md_F2 LINE L1 6201 6582 0 1 1202 239 33 0 0 chr15 80965560 80965590 -22529384 - U2 snRNA snRNA -153 35 6 1 1202 396 0 0 0 chr15 80965607 80965651 -22529323 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1202 1428 78 5 0 chr15 80965687 80965878 -22529096 + B2_Mm1t SINE B2 1 192 -1 1 1202 437 332 133 31 chr15 80965942 80966228 -22528746 + MLT1J LTR MaLR 23 337 -175 1 1202 425 238 124 13 chr15 80966283 80966444 -22528530 + L1M4b LINE L1 1893 2059 -4949 1 1202 234 0 0 0 chr15 80966460 80966486 -22528488 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1202 539 179 14 14 chr15 80966486 80966628 -22528346 + (TATG)n Simple_repeat Simple_repeat 3 144 0 1 1202 298 230 145 28 chr15 80966749 80966923 -22528051 + L1M4b LINE L1 2360 2535 -4799 1 1202 412 226 149 45 chr15 80967081 80967215 -22527759 + B1F1 SINE Alu 1 148 -1 1 1202 24 0 0 0 chr15 80967216 80967240 -22527734 + AT_rich Low_complexity Low_complexity 1 24 0 1 1202 1239 34 0 0 chr15 80967248 80967395 -22527579 + B1_Mus2 SINE Alu 1 147 0 1 1202 710 256 363 8 chr15 80967696 80968219 -22526755 + L1M4b LINE L1 336 1046 -6288 1 1202 304 202 173 48 chr15 80968379 80968483 -22526491 + RSINE1 SINE B4 14 130 -35 1 1202 194 0 39 0 chr15 80968486 80968512 -22526462 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1202 243 122 270 0 chr15 80968639 80968713 -22526261 + B1F2 SINE Alu 30 123 -26 1 1202 1351 49 49 16 chr15 80969215 80969400 -22525574 + B2_Mm2 SINE B2 1 191 -4 1 1202 615 162 0 28 chr15 80969408 80969515 -22525459 + B1_Mur4 SINE Alu 2 105 -45 1 1202 949 49 162 0 chr15 80969515 80969657 -22525317 + B2_Mm1a SINE B2 1 165 -28 1 1202 293 87 0 0 chr15 80969656 80969702 -22525272 + B1_Mus2 SINE Alu 101 146 -1 1 1202 849 204 118 5 chr15 80969723 80969910 -22525064 + B3 SINE B2 2 209 -7 1 1202 243 305 171 0 chr15 80969933 80970015 -22524959 + RSINE1 SINE B4 3 98 -67 1 1202 352 244 13 0 chr15 80970016 80970094 -22524880 - B3A SINE B2 -20 178 100 1 1202 270 312 166 5 chr15 80970222 80970409 -22524565 - Charlie1 DNA MER1_type -1110 1671 1455 1 1202 345 176 0 0 chr15 80971026 80971100 -22523874 + (TA)n Simple_repeat Simple_repeat 1 74 0 1 1202 296 251 67 129 chr15 80971129 80971353 -22523621 - ID_B1 SINE B4 -13 211 2 1 1202 1204 48 7 0 chr15 80971452 80971598 -22523376 + B1_Mus1 SINE Alu 2 148 0 1 1202 286 261 139 21 chr15 80971598 80971848 -22523126 + L1M2 LINE L1 5476 5753 -538 1 1202 225 128 0 0 chr15 80972513 80972560 -22522414 + (A)n Simple_repeat Simple_repeat 1 47 0 1 1202 651 253 36 36 chr15 80973627 80973820 -22521154 - B4A SINE B4 -6 286 94 1 1202 425 127 13 0 chr15 80973835 80973914 -22521060 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 1202 876 289 26 15 chr15 80973973 80974243 -22520731 - B4A SINE B4 -18 274 2 1 1202 664 208 0 100 chr15 80974535 80974695 -22520279 + B1_Mus2 SINE Alu 2 145 -2 1 1202 1074 189 155 52 chr15 80974861 80975262 -22519712 + RMER10A LTR ERVL 1 442 0 1 1202 205 348 54 0 chr15 80975513 80975605 -22519369 - MIRc SINE MIR -69 193 97 1 1202 4507 16 0 0 chr15 80975897 80976390 -22518584 + MT2_Mm LTR ERVL 1 493 0 1 1202 41692 14 14 0 chr15 80976390 80981688 -22513286 + MERVL-int LTR ERVL 1 5371 -114 1 1202 374 123 13 40 chr15 80981688 80981764 -22513210 + ORR1A3-int LTR MaLR 567 640 -1323 1 1202 321 0 0 0 chr15 80981764 80981802 -22513172 + MERVL-int LTR ERVL 5448 5485 0 1 1202 4507 16 0 0 chr15 80981802 80982295 -22512679 + MT2_Mm LTR ERVL 1 493 0 1 1202 649 268 123 5 chr15 80982427 80982622 -22512352 + ID_B1 SINE B4 1 218 -6 1 1202 669 152 60 8 chr15 80982673 80982806 -22512168 + B3 SINE B2 21 160 -56 1 1202 696 156 0 151 chr15 80982850 80983009 -22511965 + B1_Mur3 SINE Alu 5 139 -10 1 1202 369 0 0 0 chr15 80983015 80983056 -22511918 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1 1202 595 239 14 14 chr15 80983072 80983216 -22511758 + ID_B1 SINE B4 78 221 -3 1 1202 5542 165 88 48 chr15 80983227 80984477 -22510497 + RMER12 LTR ERVK 4 1303 -19 1 1202 584 282 6 41 chr15 80986031 80986201 -22508773 + RSINE1 SINE B4 2 165 0 1 1202 231 289 104 104 chr15 80986245 80986380 -22508594 + B4A SINE B4 13 147 -145 1 1202 197 59 59 0 chr15 80986524 80986558 -22508416 + (CAGA)n Simple_repeat Simple_repeat 3 38 0 1 1202 322 209 0 131 chr15 80986588 80986604 -22508370 + MT2B LTR ERVL 155 157 -444 1 1202 682 172 26 0 chr15 80986604 80986720 -22508254 + B1_Mur1 SINE Alu 3 121 -28 1 1202 226 255 0 0 chr15 80986731 80986778 -22508196 - B1F1 SINE Alu -97 52 6 1 1202 1274 106 31 11 chr15 80986953 80987144 -22507830 + B2_Mm2 SINE B2 1 195 0 1 1202 3299 46 5 2 chr15 80987258 80987653 -22507321 - MTA_Mm LTR MaLR 0 396 1 1 1202 464 241 44 9 chr15 80988172 80988285 -22506689 - B1_Mur2 SINE Alu -32 117 1 1 1202 204 40 0 0 chr15 80988379 80988404 -22506570 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 1202 329 235 50 10 chr15 80988739 80988838 -22506136 - ID_B1 SINE B4 -6 218 116 1 1202 225 212 148 78 chr15 80989965 80990093 -22504881 - ID_B1 SINE B4 -2 222 86 1 1202 229 200 0 0 chr15 80990051 80990096 -22504878 - PB1D9 SINE Alu -74 46 2 1 1202 321 292 44 70 chr15 80990118 80990232 -22504742 + ORR1E LTR MaLR 49 159 -215 1 1202 717 252 62 28 chr15 80990291 80990614 -22504360 + RLTR15 LTR ERVK 10 343 -16 1 1202 400 219 93 10 chr15 80990794 80990891 -22504083 - PB1D10 SINE Alu -7 110 6 1 1202 1174 68 0 0 chr15 80990946 80991092 -22503882 + B1_Mus2 SINE Alu 2 147 0 1 1202 241 24 48 24 chr15 80991093 80991135 -22503839 + (CAAAAA)n Simple_repeat Simple_repeat 3 45 0 1 1202 611 279 52 0 chr15 80991532 80991686 -22503288 + RSINE1 SINE B4 4 165 0 1 1202 1340 77 39 6 chr15 80991728 80991910 -22503064 + B2_Mm2 SINE B2 2 189 -6 1 1202 353 236 49 0 chr15 80992002 80992096 -22502878 + B1F1 SINE Alu 6 104 -13 1 1202 492 246 125 49 chr15 80992102 80992286 -22502688 - B3A SINE B2 0 198 1 1 1202 197 65 0 31 chr15 80992356 80992388 -22502586 + (GGAA)n Simple_repeat Simple_repeat 1 31 0 1 1202 689 88 0 10 chr15 80992546 80992649 -22502325 + (GGA)n Simple_repeat Simple_repeat 2 103 0 1 1202 608 231 42 0 chr15 80992677 80992820 -22502154 + B1F SINE Alu 1 149 0 1 1202 773 198 54 16 chr15 80993032 80993217 -22501757 + B3A SINE B2 2 193 -5 1 1202 835 288 63 29 chr15 80993287 80993637 -22501337 + MER44B DNA MER2_type 83 444 -106 1 1202 252 246 185 0 chr15 80993647 80993712 -22501262 + ID4_ SINE ID 5 81 -2 1 1202 791 177 0 52 chr15 80993927 80994082 -22500892 - B1_Mus2 SINE Alu 0 147 1 1 1202 225 0 0 0 chr15 80995994 80996019 -22498955 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 1 1202 21 36 0 0 chr15 80996379 80996407 -22498567 + AT_rich Low_complexity Low_complexity 1 28 0 1 1202 223 268 80 60 chr15 80996507 80996528 -22498446 + ID_B1 SINE B4 65 218 -6 1 1202 298 231 100 69 chr15 80996528 80996658 -22498316 + B1F SINE Alu 10 143 -6 1 1202 523 133 60 20 chr15 80996897 80996997 -22497977 + PB1D9 SINE Alu 2 105 -15 1 1202 225 0 0 0 chr15 80996997 80997022 -22497952 + (CAGA)n Simple_repeat Simple_repeat 4 28 0 1 1202 879 113 267 17 chr15 80997300 80997480 -22497494 + URR1B DNA MER1_type 1 225 0 1 1202 515 291 33 26 chr15 80997577 80997729 -22497245 + RSINE1 SINE B4 13 165 0 1 1202 1023 97 0 0 chr15 80997778 80997912 -22497062 + B1_Mus1 SINE Alu 2 135 -13 1 1202 228 182 0 0 chr15 80998360 80998404 -22496570 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1202 1073 62 20 14 chr15 80998766 80998912 -22496062 + B1_Mus2 SINE Alu 1 147 0 1 1202 726 117 0 0 chr15 81000000 81000103 -22494871 + B1_Mus2 SINE Alu 32 134 -13 1 1202 212 0 0 35 chr15 81000103 81000132 -22494842 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 2 1202 569 259 14 48 chr15 81000149 81000295 -22494679 + B1_Mur1 SINE Alu 6 146 -3 3 1202 321 231 151 21 chr15 81000315 81000408 -22494566 + PB1D10 SINE Alu 13 117 0 4 1202 578 218 116 21 chr15 81000417 81000558 -22494416 + B3 SINE B2 2 153 -45 5 1202 303 122 0 0 chr15 81000558 81000607 -22494367 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1202 549 284 94 61 chr15 81000607 81000645 -22494329 + B3A SINE B2 154 187 -11 5 1202 647 119 8 76 chr15 81000771 81000889 -22494085 + B1_Mus2 SINE Alu 37 146 -1 7 1202 226 234 0 0 chr15 81000988 81001035 -22493939 + (TATATG)n Simple_repeat Simple_repeat 6 52 0 8 1202 729 211 35 109 chr15 81001048 81001277 -22493697 + B3 SINE B2 1 212 -4 9 1202 26 74 0 0 chr15 81001277 81001331 -22493643 + AT_rich Low_complexity Low_complexity 1 54 0 1 1202 201 322 25 25 chr15 81001468 81001589 -22493385 - MIR3 SINE MIR -30 178 58 1 1202 867 234 6 28 chr15 81001613 81001793 -22493181 - B3 SINE B2 -7 209 34 1 1202 234 244 95 24 chr15 81002215 81002299 -22492675 + L1M5 LINE L1 5500 5589 -584 1 150 1403 83 0 5 chr15 81002397 81002555 -22492419 + B2_Mm1a SINE B2 1 158 -35 1 1203 378 0 0 0 chr15 81002555 81002597 -22492377 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1 1203 1403 83 0 5 chr15 81002597 81002632 -22492342 + B2_Mm1a SINE B2 159 193 0 1 1203 503 266 43 49 chr15 81003394 81003556 -22491418 + B4 SINE B4 4 164 -128 1 1203 189 0 0 0 chr15 81003740 81003761 -22491213 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1203 201 154 0 0 chr15 81003761 81003800 -22491174 + T-rich Low_complexity Low_complexity 1 39 0 1 1203 799 272 0 0 chr15 81003840 81004020 -22490954 + B3A SINE B2 2 181 -17 1 1203 426 268 31 30 chr15 81004137 81004272 -22490702 - RSINE1 SINE B4 -3 162 26 2 1203 221 333 53 0 chr15 81004371 81004446 -22490528 - ID4_ SINE ID -2 81 3 2 1203 366 243 0 0 chr15 81004470 81004540 -22490434 - PB1D10 SINE Alu -28 89 20 2 1203 280 387 58 6 chr15 81004556 81004712 -22490262 + MLT2C1 LTR ERVL 32 195 -202 2 1203 451 319 108 51 chr15 81005031 81005260 -22489714 + MLT1D-int LTR MaLR 2 243 -1128 2 1203 430 221 8 34 chr15 81005260 81005377 -22489597 + PB1D9 SINE Alu 1 114 -6 2 1203 451 316 109 58 chr15 81005377 81005660 -22489314 + MLT1D-int LTR MaLR 244 550 -821 2 1203 455 246 56 112 chr15 81005673 81005870 -22489104 + B3A SINE B2 5 190 -8 2 1203 962 269 77 74 chr15 81005900 81005918 -22489056 + MLT1D-int LTR MaLR 509 527 -844 2 1203 1215 61 0 0 chr15 81005918 81006065 -22488909 + B1_Mus1 SINE Alu 2 148 0 2 1203 962 269 77 74 chr15 81006065 81006411 -22488563 + MLT1D-int LTR MaLR 528 874 -497 2 1203 516 160 144 48 chr15 81006755 81006880 -22488094 - B1_Mus1 SINE Alu -11 137 1 2 1203 813 216 0 7 chr15 81006925 81007065 -22487909 - RSINE1 SINE B4 -4 161 23 2 1203 986 137 6 0 chr15 81007071 81007232 -22487742 - MTC LTR MaLR -259 162 1 3 1203 341 256 92 43 chr15 81007255 81007297 -22487677 + L1MB1 LINE L1 5776 5817 -495 3 1203 452 333 32 0 chr15 81007297 81007453 -22487521 - RSINE1 SINE B4 0 165 5 3 1203 455 249 34 6 chr15 81007453 81007594 -22487380 + L1MB1 LINE L1 5818 5968 -344 3 1203 438 298 49 29 chr15 81007901 81008105 -22486869 + L1MB3 LINE L1 5961 6168 -15 3 1203 290 312 85 59 chr15 81008142 81008295 -22486679 + MLT1D-int LTR MaLR 938 1094 -395 2 1203 186 43 0 0 chr15 81008348 81008371 -22486603 + (TCTCCC)n Simple_repeat Simple_repeat 3 25 0 3 1203 557 253 63 25 chr15 81008496 81008654 -22486320 + RSINE1 SINE B4 2 165 0 3 1203 289 303 26 3 chr15 81008732 81008834 -22486140 + MLT1D-int LTR MaLR 1638 1729 -6 2 1203 643 289 161 55 chr15 81008839 81009223 -22485751 + MLT1D LTR MaLR 7 431 -74 2 1203 192 314 133 25 chr15 81009225 81009421 -22485553 - L2 LINE L2 -660 2759 2543 3 1203 297 327 17 70 chr15 81009749 81009864 -22485110 - L2b LINE L2 -1 3374 3266 3 1203 610 283 43 102 chr15 81009889 81010140 -22484834 + B4 SINE B4 1 236 -56 3 1203 1342 224 102 66 chr15 81010140 81010526 -22484448 + MT2A LTR ERVL 1 405 -128 3 1203 1300 20 0 0 chr15 81010526 81010673 -22484301 - B1_Mm SINE Alu 0 147 1 4 1203 1342 224 102 66 chr15 81010673 81010758 -22484216 + MT2A LTR ERVL 406 489 -44 3 1203 192 152 0 0 chr15 81010761 81010794 -22484180 + (CATATA)n Simple_repeat Simple_repeat 3 35 0 4 1203 294 116 0 80 chr15 81010809 81010884 -22484090 + MT2A LTR ERVL 462 530 -3 3 1203 230 350 17 0 chr15 81010887 81010947 -22484027 + B4 SINE B4 232 292 0 3 1203 216 67 0 0 chr15 81010948 81010978 -22483996 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1203 227 237 145 0 chr15 81011106 81011182 -22483792 - MIRb SINE MIR -129 139 50 4 1203 323 277 85 0 chr15 81011891 81011985 -22482989 + B1F SINE Alu 46 147 -2 4 1203 235 264 0 0 chr15 81012012 81012065 -22482909 + PB1D10 SINE Alu 9 61 -56 4 1203 599 150 133 59 chr15 81012138 81012273 -22482701 - B1_Mur4 SINE Alu 0 150 6 4 1203 365 260 0 13 chr15 81012406 81012484 -22482490 - ID4_ SINE ID -6 77 1 4 1203 1196 55 0 14 chr15 81012568 81012716 -22482258 + B1_Mus2 SINE Alu 1 146 -1 4 1203 656 183 278 0 chr15 81013335 81013504 -22481470 - B3 SINE B2 0 216 1 4 1203 338 310 0 0 chr15 81013723 81013810 -22481164 + ID_B1 SINE B4 106 192 -32 5 1203 231 301 0 88 chr15 81013810 81013825 -22481149 + PB1D10 SINE Alu 25 117 0 5 1203 745 159 71 0 chr15 81013894 81014020 -22480954 + B1_Mus2 SINE Alu 3 137 -10 5 1203 447 250 23 108 chr15 81015552 81015682 -22479292 + B1_Mur2 SINE Alu 1 119 -1 5 1203 471 263 25 8 chr15 81015732 81015851 -22479123 + RSINE1 SINE B4 2 122 -43 5 1203 203 0 37 0 chr15 81015851 81015878 -22479096 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1203 555 53 0 0 chr15 81015878 81015952 -22479022 + (GA)n Simple_repeat Simple_repeat 2 76 0 5 1203 216 267 176 10 chr15 81016152 81016254 -22478720 - MIR SINE MIR -44 218 100 5 1203 254 257 26 39 chr15 81016611 81016688 -22478286 + ID4_ SINE ID 5 80 -3 5 1203 542 333 52 18 chr15 81016794 81017023 -22477951 + MLT1F LTR MaLR 226 462 -86 5 1203 524 152 110 10 chr15 81017009 81017109 -22477865 + B1_Mus2 SINE Alu 30 139 -8 6 1203 516 286 40 54 chr15 81017254 81017531 -22477443 - B4A SINE B4 -18 274 2 6 1203 345 295 0 0 chr15 81017550 81017628 -22477346 - PB1D10 SINE Alu -37 80 3 6 1203 402 269 62 94 chr15 81017779 81017794 -22477180 + B4 SINE B4 69 220 -69 6 1203 817 199 14 7 chr15 81017794 81017936 -22477038 + B1_Mur2 SINE Alu 1 143 -6 6 1203 277 252 94 51 chr15 81018129 81018246 -22476728 + PB1 SINE Alu 1 122 -5 6 1203 446 252 79 64 chr15 81018269 81018409 -22476565 + B1F SINE Alu 1 142 -7 6 1203 833 177 172 0 chr15 81018533 81018725 -22476249 - URR1B DNA MER1_type 0 225 1 6 1203 306 281 0 77 chr15 81018996 81019100 -22475874 + L2c LINE L2 3292 3387 0 6 1203 705 150 71 0 chr15 81019456 81019583 -22475391 + B1_Mur1 SINE Alu 14 149 0 6 1203 282 314 46 28 chr15 81020161 81020269 -22474705 - MIRb SINE MIR -32 236 127 7 1203 474 18 0 0 chr15 81020383 81020438 -22474536 + (CA)n Simple_repeat Simple_repeat 1 55 0 7 1203 264 111 0 0 chr15 81021944 81021989 -22472985 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 1203 423 263 154 44 chr15 81022197 81022424 -22472550 - RMER15 LTR ERVL -11 564 313 7 1203 252 86 0 0 chr15 81023084 81023119 -22471855 + (A)n Simple_repeat Simple_repeat 1 35 0 7 1203 511 307 31 0 chr15 81023185 81023312 -22471662 - ID_B1 SINE B4 -11 213 83 7 1203 180 111 0 0 chr15 81023768 81023795 -22471179 + (TA)n Simple_repeat Simple_repeat 2 28 0 7 1203 1179 195 5 0 chr15 81023825 81024030 -22470944 - B3 SINE B2 -9 207 2 7 1203 322 278 253 6 chr15 81024122 81024292 -22470682 + B3 SINE B2 4 215 -1 7 1203 1199 176 10 0 chr15 81024309 81024513 -22470461 - B3 SINE B2 -5 211 6 7 1203 1400 72 0 81 chr15 81024742 81024953 -22470021 - B2_Mm2 SINE B2 0 195 2 8 1203 1134 43 7 0 chr15 81024959 81025099 -22469875 - B1_Mm SINE Alu -1 146 6 8 1203 369 133 0 0 chr15 81025145 81025220 -22469754 + (TCTG)n Simple_repeat Simple_repeat 2 76 0 8 1203 243 203 0 0 chr15 81025358 81025422 -22469552 + (CCA)n Simple_repeat Simple_repeat 1 64 0 8 1203 264 300 38 0 chr15 81025451 81025531 -22469443 + MLT1K LTR MaLR 225 307 -288 8 1203 253 254 34 0 chr15 81025615 81025674 -22469300 + ID SINE ID 1 61 -163 8 1203 342 0 0 0 chr15 81025675 81025713 -22469261 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 1203 333 70 55 14 chr15 81025713 81025786 -22469188 + (CAGAGA)n Simple_repeat Simple_repeat 3 78 0 8 1203 260 276 89 105 chr15 81025956 81026146 -22468828 - LTR16A1 LTR ERVL -244 212 26 8 1203 258 303 180 53 chr15 81026407 81026557 -22468417 - FAM SINE Alu -5 306 138 8 1203 742 210 24 3 chr15 81026430 81026570 -22468404 - ID_B1 SINE B4 -11 213 78 9 1203 598 152 71 9 chr15 81026751 81026864 -22468110 - B1_Mur4 SINE Alu 0 150 31 9 1203 292 233 143 48 chr15 81026758 81026884 -22468090 - B4 SINE B4 -73 219 82 9 1203 389 242 27 48 chr15 81027304 81027450 -22467524 - MIRc SINE MIR -86 182 38 9 1203 715 207 0 52 chr15 81027506 81027659 -22467315 + B1_Mur1 SINE Alu 3 147 -2 9 1203 381 22 0 0 chr15 81027988 81028034 -22466940 + (TC)n Simple_repeat Simple_repeat 2 47 0 9 1203 303 49 0 0 chr15 81028034 81028074 -22466900 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1203 429 239 8 49 chr15 81028096 81028219 -22466755 - PB1D7 SINE Alu 0 120 3 9 1203 262 263 117 39 chr15 81028286 81028389 -22466585 - BC1_Mm scRNA scRNA -34 118 8 9 1203 580 264 0 108 chr15 81028464 81028723 -22466251 + L1MA6 LINE L1 6065 6295 -5 9 1203 317 258 146 0 chr15 81028751 81028840 -22466134 + ID_B1 SINE B4 123 224 0 1 1203 996 136 0 7 chr15 81028841 81028989 -22465985 + B1F1 SINE Alu 1 147 -2 1 1203 376 226 207 27 chr15 81028989 81029139 -22465835 + B3A SINE B2 19 195 -3 1 1203 693 150 142 0 chr15 81029195 81029322 -22465652 + B1_Mus2 SINE Alu 1 145 -2 1 1203 885 193 7 0 chr15 81029423 81029563 -22465411 - B1_Mur3 SINE Alu -7 142 2 1 1203 234 279 18 63 chr15 81029622 81029721 -22465253 - MIRm SINE MIR -114 162 62 1 1203 224 167 0 59 chr15 81029944 81029995 -22464979 + T-rich Low_complexity Low_complexity 3 50 0 1 1203 860 160 7 53 chr15 81030293 81030445 -22464529 - B1_Mur4 SINE Alu 0 150 6 1 1203 374 256 79 8 chr15 81030559 81030685 -22464289 + B1F SINE Alu 14 148 -1 1 1203 576 196 0 0 chr15 81030718 81030897 -22464077 + (TG)n Simple_repeat Simple_repeat 1 179 0 1 1203 510 221 0 0 chr15 81030919 81031091 -22463883 + (TG)n Simple_repeat Simple_repeat 1 172 0 1 1203 633 190 0 0 chr15 81031140 81031319 -22463655 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 1203 360 258 157 71 chr15 81031326 81031593 -22463381 - B4A SINE B4 0 292 3 1 1203 327 276 74 7 chr15 81031651 81031786 -22463188 + MER96B DNA hAT 13 156 -261 1 1203 1332 47 0 39 chr15 81031793 81031972 -22463002 - B2_Mm2 SINE B2 -1 194 23 1 1203 268 224 171 0 chr15 81032085 81032161 -22462813 + L1M4 LINE L1 5024 5112 -1034 1 1203 215 300 24 24 chr15 81032161 81032243 -22462731 + ID4 SINE ID 2 83 0 1 1203 669 218 0 0 chr15 81032382 81032506 -22462468 - RSINE1 SINE B4 -40 125 2 1 1203 297 0 0 0 chr15 81032536 81032569 -22462405 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 1 1203 345 24 0 0 chr15 81032569 81032610 -22462364 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1203 659 271 29 0 chr15 81032611 81032751 -22462223 - RSINE1 SINE B4 -11 154 11 1 1203 1139 22 57 14 chr15 81032793 81032934 -22462040 - B1_Mus1 SINE Alu 0 148 2 1 1203 328 258 42 67 chr15 81032957 81033026 -22461948 + L1M4 LINE L1 5304 5369 -795 1 1203 1923 121 48 128 chr15 81033026 81033337 -22461637 + ORR1B2 LTR MaLR 1 312 -55 1 1203 1173 55 0 14 chr15 81033337 81033484 -22461490 + B1_Mm SINE Alu 1 145 -2 1 1203 1923 121 48 128 chr15 81033484 81033571 -22461403 + ORR1B2 LTR MaLR 313 367 0 1 1203 328 256 43 66 chr15 81033571 81033645 -22461329 + L1M4 LINE L1 5370 5441 -723 1 1203 359 308 25 33 chr15 81033645 81033755 -22461219 + ID_B1 SINE B4 105 214 -10 1 1203 582 15 0 0 chr15 81033755 81033822 -22461152 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 1 1203 305 242 15 29 chr15 81033942 81034010 -22460964 + tRNA-Ala-GCY_ tRNA tRNA 2 68 -7 1 1203 298 284 12 58 chr15 81034010 81034021 -22460953 + ID4 SINE ID 27 82 -1 1 1203 378 0 0 0 chr15 81034119 81034161 -22460813 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 1203 1861 172 106 13 chr15 81034455 81034831 -22460143 - MTD LTR MaLR -1 418 8 1 1203 329 148 19 0 chr15 81034881 81034935 -22460039 + PB1 SINE Alu 60 114 -13 1 1203 529 213 46 66 chr15 81035040 81035191 -22459783 - B1F2 SINE Alu 0 149 2 1 1203 181 180 40 0 chr15 81035309 81035359 -22459615 + GA-rich Low_complexity Low_complexity 2 53 0 1 1203 434 205 26 0 chr15 81035359 81035437 -22459537 + ID_B1 SINE B4 80 159 -65 1 1203 405 231 0 42 chr15 81035364 81035459 -22459515 + PB1D10 SINE Alu 6 96 -21 1 1203 749 229 72 15 chr15 81035472 81035691 -22459283 + B3A SINE B2 1 215 -1 1 1203 780 257 19 29 chr15 81035776 81035867 -22459107 - ORR1D1 LTR MaLR 0 374 284 1 1203 5915 82 40 32 chr15 81035867 81036766 -22458208 - RMER17A2 LTR ERVK 0 906 1 1 1203 780 257 19 29 chr15 81036766 81036882 -22458092 - ORR1D1 LTR MaLR -91 283 169 1 1203 461 280 24 107 chr15 81036975 81037143 -22457831 - RSINE1 SINE B4 0 165 12 1 1203 1258 35 0 0 chr15 81037190 81037335 -22457639 - B1_Mm SINE Alu 0 147 3 1 1203 641 13 13 0 chr15 81037335 81037413 -22457561 + (TTTTC)n Simple_repeat Simple_repeat 3 81 0 1 1203 2192 97 9 67 chr15 81037457 81037799 -22457175 + ORR1A4 LTR MaLR 8 329 0 1 1203 559 172 21 122 chr15 81037799 81037960 -22457014 - B3 SINE B2 -20 196 2 1 1203 374 283 198 19 chr15 81037973 81038236 -22456738 - L1M4 LINE L1 -1140 5006 4697 1 1203 438 247 39 88 chr15 81038283 81038487 -22456487 + B3A SINE B2 5 198 0 1 1203 263 28 28 0 chr15 81038679 81038715 -22456259 + (TTTC)n Simple_repeat Simple_repeat 4 40 0 1 1203 930 176 0 0 chr15 81038716 81038864 -22456110 - B1_Mur4 SINE Alu 0 150 3 1 1203 267 344 0 0 chr15 81038890 81038954 -22456020 - PB1D7 SINE Alu -12 108 45 1 1203 988 87 7 7 chr15 81038956 81039106 -22455868 + (TTC)n Simple_repeat Simple_repeat 2 151 0 1 1203 257 151 0 19 chr15 81039678 81039732 -22455242 + T-rich Low_complexity Low_complexity 3 55 0 1 1203 885 129 49 28 chr15 81039745 81039889 -22455085 - B1_Mus1 SINE Alu -1 147 1 1 1203 1077 129 37 21 chr15 81039902 81040092 -22454882 - B2_Mm2 SINE B2 -2 193 1 1 1203 502 297 22 0 chr15 81040102 81040240 -22454734 - B1F1 SINE Alu -8 141 1 1 1203 289 146 18 0 chr15 81040738 81040793 -22454181 - Lx8 LINE L1 -2 7471 7416 1 1203 314 167 0 0 chr15 81041171 81041225 -22453749 - ID_B1 SINE B4 -7 217 164 1 1203 358 215 13 92 chr15 81041234 81041354 -22453620 - MTE2a LTR MaLR 0 379 264 1 1203 618 295 12 6 chr15 81041365 81041532 -22453442 - MTE2a LTR MaLR -185 194 27 1 1203 391 142 60 13 chr15 81041599 81041749 -22453225 + (TG)n Simple_repeat Simple_repeat 1 157 0 1 1203 199 194 43 11 chr15 81041763 81041857 -22453117 + (TG)n Simple_repeat Simple_repeat 1 97 0 1 1203 181 155 19 85 chr15 81041908 81042014 -22452960 + (TATG)n Simple_repeat Simple_repeat 2 100 0 1 1203 349 314 45 32 chr15 81042092 81042337 -22452637 - B4A SINE B4 0 292 2 1 1203 1025 84 7 0 chr15 81042357 81042500 -22452474 - B1_Mm SINE Alu 0 147 4 1 1203 360 244 78 71 chr15 81042500 81042543 -22452431 - MT2B2 LTR ERVL -425 159 116 1 1203 210 258 129 0 chr15 81042496 81042558 -22452416 - ID_B1 SINE B4 -71 153 84 1 1203 274 265 36 12 chr15 81042831 81042915 -22452059 + MLT1K LTR MaLR 218 303 -292 1 1203 250 176 20 0 chr15 81042937 81042988 -22451986 - B1_Mur1 SINE Alu 0 149 98 1 1203 229 334 54 8 chr15 81043530 81043656 -22451318 + MIRb SINE MIR 12 142 -126 1 1203 1065 150 140 0 chr15 81043780 81043814 -22451160 + URR1A DNA MER1_type 3 61 -165 1 1203 216 0 0 0 chr15 81043814 81043838 -22451136 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 1203 1065 150 140 0 chr15 81043838 81043996 -22450978 + URR1A DNA MER1_type 62 221 -5 1 1203 815 257 86 71 chr15 81044223 81044415 -22450559 - RMER10A LTR ERVL -13 429 243 1 1203 528 16 0 0 chr15 81044415 81044476 -22450498 + (GA)n Simple_repeat Simple_repeat 1 61 0 1 1203 815 257 86 71 chr15 81044476 81044677 -22450297 - RMER10A LTR ERVL -200 242 30 1 1203 455 257 48 35 chr15 81044684 81044829 -22450145 + B1F2 SINE Alu 3 149 0 1 1203 2894 133 45 23 chr15 81044934 81045448 -22449526 + RLTR31_Mm LTR ERVK 1 525 -36 1 1203 761 119 25 0 chr15 81045455 81045573 -22449401 + B1_Mus2 SINE Alu 26 146 -1 1 1203 251 71 24 0 chr15 81045575 81045617 -22449357 + (CAAAAA)n Simple_repeat Simple_repeat 3 45 0 1 1203 210 204 23 0 chr15 81045813 81045857 -22449117 + RSINE1 SINE B4 83 127 -38 1 1203 290 231 0 47 chr15 81045926 81046053 -22448921 + ORR1B1-int LTR MaLR 634 754 -755 1 1203 1022 31 69 0 chr15 81045954 81046084 -22448890 + B1_Mus1 SINE Alu 10 148 0 1 1203 198 217 0 0 chr15 81046120 81046189 -22448785 + C-rich Low_complexity Low_complexity 1 69 0 1 1203 1407 180 187 25 chr15 81046255 81046614 -22448360 - RMER10A LTR ERVL -8 434 18 1 1203 247 114 68 0 chr15 81046601 81046645 -22448329 - PB1D9 SINE Alu -32 88 42 1 1203 243 0 318 0 chr15 81046680 81046812 -22448162 + (CCTG)n Simple_repeat Simple_repeat 2 175 0 1 1203 395 0 0 163 chr15 81046732 81046947 -22448027 + (CTCTG)n Simple_repeat Simple_repeat 1 180 0 1 1203 427 164 0 0 chr15 81046882 81046949 -22448025 + (TCTCTG)n Simple_repeat Simple_repeat 5 71 0 1 1203 347 155 0 33 chr15 81046949 81047009 -22447965 - B1_Mur4 SINE Alu -90 60 3 1 1203 260 27 27 0 chr15 81047009 81047046 -22447928 + (TTTG)n Simple_repeat Simple_repeat 4 41 0 1 1203 250 294 43 21 chr15 81047178 81047272 -22447702 + MLT1A1 LTR MaLR 286 381 -27 1 1203 190 380 54 11 chr15 81048107 81048200 -22446774 - L2b LINE L2 -23 3352 3256 1 1203 1142 75 0 26 chr15 81048231 81048382 -22446592 + B1_Mus1 SINE Alu 2 148 0 1 1203 470 208 69 39 chr15 81048401 81048531 -22446443 + B1F2 SINE Alu 1 134 -15 1 1203 243 0 0 0 chr15 81048532 81048559 -22446415 + (CAA)n Simple_repeat Simple_repeat 3 29 0 1 1203 2670 126 9 47 chr15 81048782 81048861 -22446113 + MTC LTR MaLR 1 80 -341 1 1203 1172 48 7 0 chr15 81048861 81049006 -22445968 + B1_Mus2 SINE Alu 2 147 0 1 1203 988 119 0 11 chr15 81049008 81049187 -22445787 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 1 1203 2670 126 9 47 chr15 81049187 81049528 -22445446 + MTC LTR MaLR 81 408 -13 1 1203 697 284 23 23 chr15 81049870 81050090 -22444884 - ID_B1 SINE B4 -3 221 2 1 1203 1122 175 18 45 chr15 81050105 81050327 -22444647 - B3 SINE B2 0 216 1 1 1203 996 98 8 0 chr15 81050370 81050503 -22444471 + B1_Mur3 SINE Alu 1 134 -15 1 1203 2745 67 178 0 chr15 81050573 81050978 -22443996 + RLTR44C LTR ERVK 1 477 -25 1 1203 232 174 0 21 chr15 81050991 81051038 -22443936 + GA-rich Low_complexity Low_complexity 2 47 0 1 1203 366 23 0 0 chr15 81051080 81051123 -22443851 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1203 436 234 27 27 chr15 81051250 81051360 -22443614 - PB1D10 SINE Alu -1 116 7 1 1203 1341 104 0 20 chr15 81051582 81051778 -22443196 + B2_Mm2 SINE B2 2 193 -2 1 1203 180 330 106 35 chr15 81051818 81051931 -22443043 + MIRc SINE MIR 20 140 -128 1 1203 420 304 68 0 chr15 81052466 81052614 -22442360 - RSINE1 SINE B4 -6 159 2 1 1203 654 264 52 40 chr15 81052614 81052788 -22442186 - ID_B1 SINE B4 -10 214 39 1 1203 273 244 108 118 chr15 81052796 81052889 -22442085 - ID_B1 SINE B4 -16 208 117 2 1203 256 312 45 67 chr15 81052916 81053050 -22441924 + B4A SINE B4 86 216 -76 2 1203 2248 184 103 67 chr15 81052990 81053200 -22441774 + RMER20B LTR ERVK 31 274 -353 2 1203 375 78 0 0 chr15 81053200 81053251 -22441723 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2 1203 1147 66 0 0 chr15 81053251 81053388 -22441586 - B1_Mus1 SINE Alu -10 138 2 2 1203 2248 184 103 67 chr15 81053388 81053728 -22441246 + RMER20B LTR ERVK 275 601 -26 2 1203 299 273 0 0 chr15 81053728 81053794 -22441180 + ID_B1 SINE B4 159 224 0 2 1203 1293 85 15 36 chr15 81053797 81053993 -22440981 + B2_Mm2 SINE B2 2 193 -2 2 1203 595 195 116 8 chr15 81054075 81054204 -22440770 + ID_B1 SINE B4 81 223 -1 2 1203 665 269 150 41 chr15 81054286 81054627 -22440347 - L1MB7 LINE L1 -161 6023 5646 2 1203 425 254 89 7 chr15 81054687 81054822 -22440152 + MER2 DNA MER2_type 85 230 -115 2 1203 379 149 53 13 chr15 81054821 81054896 -22440078 + PB1D7 SINE Alu 41 118 -2 2 1203 233 364 30 0 chr15 81055016 81055115 -22439859 + MER2 DNA MER2_type 212 313 -32 2 1203 693 209 191 6 chr15 81055121 81055299 -22439675 - B3 SINE B2 -1 215 5 2 1203 642 236 25 65 chr15 81055348 81055369 -22439605 - B3A SINE B2 -6 192 177 2 1203 225 0 0 0 chr15 81055369 81055394 -22439580 + (TC)n Simple_repeat Simple_repeat 2 26 0 2 1203 285 75 0 0 chr15 81055394 81055433 -22439541 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1203 642 236 25 65 chr15 81055433 81055609 -22439365 - B3A SINE B2 -22 176 3 2 1203 349 212 25 0 chr15 81055646 81055726 -22439248 - PB1D10 SINE Alu -2 115 34 2 1203 342 227 13 0 chr15 81056077 81056152 -22438822 + ID4 SINE ID 4 79 -4 2 1203 398 183 1 33 chr15 81056537 81056628 -22438346 + PB1D9 SINE Alu 30 145 -2 2 1203 273 317 81 40 chr15 81056705 81056773 -22438201 - ERVL-int LTR ERVL -2588 3126 3057 2 1203 225 0 0 0 chr15 81056782 81056807 -22438167 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2 1203 740 268 63 10 chr15 81056807 81057004 -22437970 - ID_B1 SINE B4 -14 210 1 2 1203 273 317 81 40 chr15 81057004 81057109 -22437865 - ERVL-int LTR ERVL -2658 3056 2946 2 1203 772 297 38 21 chr15 81057239 81057700 -22437274 - ERVL-int LTR ERVL -2938 2776 2303 2 1203 232 277 60 162 chr15 81057732 81057752 -22437222 - FAM SINE Alu -2 309 290 2 1203 1118 196 59 0 chr15 81057752 81057956 -22437018 - B3 SINE B2 0 216 1 2 1203 944 227 53 10 chr15 81057962 81058171 -22436803 - ID_B1 SINE B4 -6 218 1 2 1203 653 189 77 71 chr15 81058171 81058328 -22436646 - B1F SINE Alu -22 289 9 2 1203 324 288 101 114 chr15 81058195 81058344 -22436630 - B4 SINE B4 -69 223 77 2 1203 298 316 11 0 chr15 81058401 81058496 -22436478 - ERVL-int LTR ERVL -3504 2163 2068 2 1203 1028 155 0 0 chr15 81058526 81058674 -22436300 + B1_Mur4 SINE Alu 2 149 -1 2 1203 291 54 0 0 chr15 81058676 81058713 -22436261 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 2 1203 226 265 72 14 chr15 81059008 81059077 -22435897 - ID4 SINE ID -10 73 1 2 1203 241 360 52 52 chr15 81059681 81059854 -22435120 - L2 LINE L2 -540 2879 2707 2 1203 643 259 6 64 chr15 81060036 81060193 -22434781 - B1_Mur1 SINE Alu 0 149 2 2 1203 715 163 223 25 chr15 81060230 81060387 -22434587 - B3 SINE B2 -26 190 3 2 1203 471 330 98 10 chr15 81061111 81061316 -22433658 + LTR33 LTR ERVL 293 515 0 2 1203 329 348 37 19 chr15 81061338 81061499 -22433475 - MLT1L LTR MaLR -242 368 205 2 1203 429 20 0 0 chr15 81062130 81062180 -22432794 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1203 291 273 0 29 chr15 81062181 81062249 -22432725 - tRNA-Ala-GCY_ tRNA tRNA -9 66 1 2 1203 1276 40 0 0 chr15 81062366 81062514 -22432460 - B1_Mus1 SINE Alu 0 148 1 2 1203 203 264 82 14 chr15 81063129 81063202 -22431772 - L3 LINE CR1 -4285 204 127 2 1203 329 259 13 167 chr15 81063620 81063679 -22431295 - L1MB4 LINE L1 0 6180 6128 2 1203 368 250 13 26 chr15 81063679 81063757 -22431217 - ID4_ SINE ID -6 77 1 2 1203 329 259 13 167 chr15 81063757 81063803 -22431171 - L1MB4 LINE L1 -53 6127 6093 2 1203 1149 116 52 0 chr15 81063803 81063975 -22430999 + B2_Mm2 SINE B2 1 181 -14 2 1203 329 259 13 167 chr15 81063975 81064095 -22430879 - L1MB4 LINE L1 -88 6092 5989 2 1203 929 142 14 0 chr15 81064135 81064276 -22430698 - B1_Mur4 SINE Alu 0 150 8 2 1203 439 275 42 97 chr15 81064141 81064306 -22430668 - B4 SINE B4 -72 220 65 2 1203 918 205 249 23 chr15 81064409 81064714 -22430260 - ORR1D1 LTR MaLR 0 374 1 2 1203 441 0 0 0 chr15 81064839 81064888 -22430086 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 1203 775 192 55 0 chr15 81064904 81065050 -22429924 - ID_B1 SINE B4 -70 154 1 2 1203 567 0 0 0 chr15 81067133 81067196 -22427778 + (CA)n Simple_repeat Simple_repeat 2 64 0 2 1203 342 0 0 0 chr15 81070209 81070247 -22424727 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1203 282 29 0 0 chr15 81070288 81070323 -22424651 + (GA)n Simple_repeat Simple_repeat 1 35 0 2 1203 344 264 48 108 chr15 81070471 81070637 -22424337 + Lx8 LINE L1 6989 7144 -329 2 1203 449 224 78 36 chr15 81070637 81070804 -22424170 + Lx8 LINE L1 7300 7473 0 2 1203 521 243 9 9 chr15 81071356 81071468 -22423506 + PB1D10 SINE Alu 1 112 -5 2 1203 693 118 0 0 chr15 81071488 81071598 -22423376 + (GGA)n Simple_repeat Simple_repeat 2 111 0 2 1203 552 291 38 6 chr15 81072139 81072298 -22422676 - RSINE1 SINE B4 0 165 2 2 1203 221 22 42 42 chr15 81072366 81072414 -22422560 + (TTG)n Simple_repeat Simple_repeat 1 48 0 2 1203 919 169 0 7 chr15 81072443 81072592 -22422382 - B1_Mus1 SINE Alu 0 148 1 2 1203 225 231 250 0 chr15 81072593 81072701 -22422273 - L1MB3 LINE L1 -42 6141 6007 2 1203 1153 229 4 17 chr15 81072703 81072934 -22422040 + B4 SINE B4 2 229 -63 2 1203 345 47 0 0 chr15 81072970 81073013 -22421961 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1203 434 290 70 19 chr15 81073139 81073315 -22421659 - L1MB3 LINE L1 -149 6019 5836 2 1203 772 321 30 30 chr15 81073396 81073791 -22421183 - L1MB3 LINE L1 -497 5683 5289 2 1203 709 247 0 72 chr15 81073949 81074115 -22420859 + RSINE1 SINE B4 12 165 0 2 1203 764 313 59 21 chr15 81074173 81074411 -22420563 + B4 SINE B4 44 290 -2 2 1203 1878 145 11 165 chr15 81074508 81074962 -22420012 + ORR1C2 LTR MaLR 1 384 0 2 1203 668 268 58 7 chr15 81075275 81075429 -22419545 + RSINE1 SINE B4 3 164 -1 2 1203 240 111 0 0 chr15 81075446 81075491 -22419483 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 2 1203 301 239 46 98 chr15 81075538 81075691 -22419283 + YREP_Mm Unknown Unknown 152 296 -1516 2 1203 934 130 0 0 chr15 81075568 81075699 -22419275 - B1_Mur1 SINE Alu -6 143 13 2 1203 338 295 61 82 chr15 81075601 81075785 -22419189 - MT2B LTR ERVL -319 265 90 2 1203 249 308 25 13 chr15 81076365 81076444 -22418530 - B4 SINE B4 -199 93 14 2 1203 2472 46 105 0 chr15 81076527 81076851 -22418123 + MTB LTR MaLR 1 358 -42 2 1203 698 99 10 10 chr15 81076867 81076969 -22418005 - B1_Mm SINE Alu -1 146 45 2 1203 458 37 0 0 chr15 81076977 81077031 -22417943 + MTB LTR MaLR 351 404 -3 2 1203 1099 68 0 58 chr15 81077031 81077187 -22417787 + B1_Mm SINE Alu 1 147 0 2 1203 463 263 90 8 chr15 81077524 81077658 -22417316 + RSINE1 SINE B4 18 162 -3 2 1203 632 296 65 29 chr15 81077690 81077929 -22417045 + B4A SINE B4 34 284 -8 2 1203 492 301 61 14 chr15 81077981 81078129 -22416845 - RSINE1 SINE B4 -9 156 2 2 1203 226 250 85 73 chr15 81078617 81078699 -22416275 - MIR SINE MIR -4 258 176 2 1203 352 197 30 0 chr15 81078711 81078777 -22416197 - ID_B1 SINE B4 0 224 157 2 1203 223 234 68 20 chr15 81078973 81079121 -22415853 + (TATG)n Simple_repeat Simple_repeat 4 158 0 2 1203 479 304 89 47 chr15 81079172 81079417 -22415557 - B4 SINE B4 -9 283 48 2 1203 804 207 0 0 chr15 81079996 81080136 -22414838 - B1_Mur4 SINE Alu -10 140 1 2 1203 445 293 20 0 chr15 81080176 81080275 -22414699 - RSINE1 SINE B4 -4 161 61 2 1203 235 246 29 71 chr15 81081003 81081073 -22413901 - B4 SINE B4 -2 290 224 2 1203 1002 122 13 13 chr15 81081125 81081275 -22413699 + B1_Mur4 SINE Alu 1 150 0 2 1203 228 286 113 73 chr15 81081306 81081483 -22413491 - RLTR14 LTR ERV1 -45 337 154 2 1203 850 182 28 0 chr15 81081731 81081874 -22413100 - B1_Mus2 SINE Alu 0 147 1 2 1203 542 309 43 73 chr15 81081877 81082111 -22412863 - B4A SINE B4 -65 227 1 2 1203 323 145 0 148 chr15 81082658 81082739 -22412235 + B1_Mur2 SINE Alu 62 130 -19 2 1203 296 64 0 21 chr15 81082790 81082838 -22412136 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 1203 278 255 67 0 chr15 81082854 81082940 -22412034 + PB1D10 SINE Alu 37 141 -8 2 1203 234 296 0 112 chr15 81082958 81083038 -22411936 + ID2 SINE ID 2 72 -11 2 1203 376 268 127 89 chr15 81083169 81083382 -22411592 + LTR81A LTR ERV1? 41 261 -1089 2 1203 673 178 103 23 chr15 81083702 81083913 -22411061 - RMER17C LTR ERVK -267 143 1 2 1203 291 356 32 32 chr15 81084021 81084175 -22410799 + LTR81C LTR ERV1? 955 1108 -45 2 1203 829 105 105 0 chr15 81086073 81086197 -22408777 - B1_Mus1 SINE Alu 0 148 12 2 1203 914 198 16 11 chr15 81086305 81086489 -22408485 - URR1B DNA MER1_type -4 221 37 2 1203 347 291 81 60 chr15 81086489 81086539 -22408435 + CYRA11_Mm Unknown Y-chromosome 175 413 -204 2 1203 269 232 106 0 chr15 81086604 81086711 -22408263 + L1MB2 LINE L1 5943 6064 -119 2 1203 437 252 52 22 chr15 81086802 81086832 -22408142 + B4A SINE B4 57 90 -202 2 1203 647 181 0 0 chr15 81086832 81086937 -22408037 + B1_Mus1 SINE Alu 1 105 -43 2 1203 25 0 0 0 chr15 81086986 81087011 -22407963 + AT_rich Low_complexity Low_complexity 1 25 0 2 1203 572 200 0 77 chr15 81087069 81087199 -22407775 + PB1D7 SINE Alu 1 120 0 2 1203 425 306 18 0 chr15 81087324 81087435 -22407539 - ID_B1 SINE B4 -4 220 108 2 1203 365 205 22 71 chr15 81087534 81087718 -22407256 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 2 1203 788 196 14 7 chr15 81087778 81087922 -22407052 - B1_Mur1 SINE Alu 0 149 5 2 1203 823 217 19 81 chr15 81088073 81088284 -22406690 + B3A SINE B2 1 198 0 3 1203 344 309 43 57 chr15 81088547 81088825 -22406149 - L2b LINE L2 -221 3205 2927 3 1203 536 261 146 8 chr15 81089252 81089413 -22405561 - ID_B1 SINE B4 -47 245 57 3 1203 355 257 9 35 chr15 81089696 81089809 -22405165 + RMER10B LTR ERVL 265 374 -24 3 1203 253 229 27 54 chr15 81089927 81090001 -22404973 - MER5A1 DNA MER1_type -92 74 3 3 1203 1162 203 57 0 chr15 81090067 81090279 -22404695 + ID_B1 SINE B4 1 224 0 3 1203 554 206 56 21 chr15 81090312 81090456 -22404518 - L1MA9 LINE L1 -1 6311 6163 3 1203 437 244 47 8 chr15 81090976 81091104 -22403870 - L1MA9 LINE L1 -240 6072 5940 3 1203 287 275 79 11 chr15 81091198 81091323 -22403651 - L1MA7 LINE L1 -330 5961 5835 3 1203 255 358 55 9 chr15 81091323 81091433 -22403541 - B4A SINE B4 -79 213 99 3 1203 545 206 19 19 chr15 81091340 81091444 -22403530 - PB1D9 SINE Alu -14 106 3 3 1203 339 292 0 73 chr15 81091363 81091459 -22403515 - MT2B LTR ERVL -361 240 152 3 1203 618 370 24 34 chr15 81091474 81091577 -22403397 + B4A SINE B4 2 101 -191 3 1203 3587 67 28 4 chr15 81091577 81091750 -22403224 - MT2C_Mm LTR ERVL 0 475 299 3 1203 420 20 0 0 chr15 81091750 81091799 -22403175 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 1203 3587 67 28 4 chr15 81091799 81092089 -22402885 - MT2C_Mm LTR ERVL -177 298 1 3 1203 618 370 24 34 chr15 81092089 81092279 -22402695 + B4A SINE B4 102 292 0 3 1203 738 290 39 50 chr15 81092372 81092579 -22402395 - L1MA7 LINE L1 -503 5809 5608 3 1203 1471 196 126 29 chr15 81092579 81092920 -22402054 - ORR1D1 LTR MaLR 0 374 1 3 1203 738 290 39 50 chr15 81092920 81093050 -22401924 - L1MA7 LINE L1 -705 5607 5476 3 1203 237 33 0 0 chr15 81093050 81093080 -22401894 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 3 1203 440 316 0 9 chr15 81093080 81093195 -22401779 - PB1D10 SINE Alu -3 114 1 3 1203 24 53 0 0 chr15 81093202 81093240 -22401734 + AT_rich Low_complexity Low_complexity 1 38 0 3 1203 446 318 32 26 chr15 81093274 81093429 -22401545 - RSINE1 SINE B4 -9 156 1 3 1203 1230 205 0 0 chr15 81093459 81093669 -22401305 - B3 SINE B2 -3 213 4 3 1203 1171 64 0 0 chr15 81093851 81093991 -22400983 + B1_Mus1 SINE Alu 1 140 -8 3 1203 1324 112 16 0 chr15 81094022 81094209 -22400765 + B2_Mm2 SINE B2 1 190 -5 3 1203 281 224 82 64 chr15 81094362 81094503 -22400471 + MIRb SINE MIR 54 189 -79 3 1203 270 355 124 22 chr15 81095659 81095708 -22399266 - L4 LINE RTE -2 2027 1977 3 1203 279 0 0 0 chr15 81095708 81095739 -22399235 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 1203 270 335 103 37 chr15 81095739 81096026 -22398948 - L4 LINE RTE -53 1976 1674 3 1203 334 390 7 7 chr15 81096147 81096289 -22398685 + L1MC4a LINE L1 5765 5906 -1976 3 1203 348 130 37 0 chr15 81096432 81096486 -22398488 + B1_Mur4 SINE Alu 4 59 -91 3 1203 546 0 133 0 chr15 81096490 81096804 -22398170 + (CAGG)n Simple_repeat Simple_repeat 1 355 0 3 1203 708 119 0 35 chr15 81096807 81096920 -22398054 + B1_Mus2 SINE Alu 39 147 0 3 1203 510 17 0 0 chr15 81096940 81096999 -22397975 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 1203 237 172 103 0 chr15 81097246 81097304 -22397670 + L1M4 LINE L1 4257 4320 -1820 3 1203 468 242 23 46 chr15 81097306 81097404 -22397570 + B3A SINE B2 1 99 -99 3 1203 1731 157 160 0 chr15 81097404 81097563 -22397411 + ORR1C2 LTR MaLR 1 189 -195 3 1203 507 33 0 0 chr15 81097563 81097624 -22397350 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 1203 1731 157 160 0 chr15 81097624 81097795 -22397179 + ORR1C2 LTR MaLR 190 383 -1 3 1203 468 242 23 46 chr15 81097795 81097826 -22397148 + B3A SINE B2 100 127 -71 3 1203 267 152 0 0 chr15 81098233 81098279 -22396695 + T-rich Low_complexity Low_complexity 1 46 0 3 1203 1342 147 29 0 chr15 81098279 81098483 -22396491 - RLTR33 LTR ERVK -43 635 426 3 1203 1359 96 16 5 chr15 81098490 81098679 -22396295 - B2_Mm2 SINE B2 -2 193 3 3 1203 889 220 64 10 chr15 81098700 81098902 -22396072 - B3 SINE B2 -3 213 1 3 1203 390 240 29 29 chr15 81099109 81099212 -22395762 + MTEa LTR MaLR 277 379 0 3 1203 634 288 132 96 chr15 81099213 81099731 -22395243 + L1M4 LINE L1 4546 5107 -1039 3 1203 759 250 0 13 chr15 81099731 81099881 -22395093 + RSINE1 SINE B4 1 148 -17 3 1203 634 281 136 94 chr15 81099881 81099918 -22395056 + L1M4 LINE L1 5108 5124 -1022 3 1203 1044 214 19 19 chr15 81099918 81100123 -22394851 + B3 SINE B2 2 206 -10 3 1203 634 281 136 94 chr15 81100123 81100181 -22394793 + L1M4 LINE L1 5125 5158 -988 3 1203 1229 41 7 0 chr15 81100181 81100328 -22394646 + B1_Mus1 SINE Alu 1 148 0 3 1203 634 281 136 94 chr15 81100328 81100532 -22394442 + L1M4 LINE L1 5159 5391 -755 3 1203 599 294 127 9 chr15 81100556 81100836 -22394138 + L1M4 LINE L1 5431 5759 -424 3 1203 612 277 7 0 chr15 81100843 81100980 -22393994 + RSINE1 SINE B4 2 139 -26 3 1203 227 340 35 60 chr15 81100980 81101043 -22393931 + B2_Mm2 SINE B2 1 195 0 3 1203 416 157 0 0 chr15 81101237 81101307 -22393667 - B1_Mur3 SINE Alu -39 110 41 3 1203 2198 148 87 34 chr15 81101310 81101722 -22393252 - RLTR24 LTR ERV1 -86 443 10 3 1203 332 298 116 0 chr15 81101904 81102025 -22392949 + ID_B1 SINE B4 86 220 -4 3 1203 2021 127 34 19 chr15 81102035 81102356 -22392618 - ORR1A3 LTR MaLR 0 326 1 3 1203 487 297 43 49 chr15 81102358 81102521 -22392453 + RSINE1 SINE B4 3 164 -1 3 1203 225 0 0 0 chr15 81103695 81103720 -22391254 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1203 195 100 0 0 chr15 81103930 81103960 -22391014 + (TCC)n Simple_repeat Simple_repeat 1 30 0 3 1203 1182 245 35 4 chr15 81103960 81104214 -22390760 - MTE2b LTR MaLR -73 306 45 3 1203 771 189 0 8 chr15 81104282 81104415 -22390559 + B1_Mur4 SINE Alu 12 143 -7 3 1203 1261 55 0 0 chr15 81104425 81104571 -22390403 + B1_Mm SINE Alu 2 147 0 3 1203 520 314 159 24 chr15 81104758 81105009 -22389965 - B4A SINE B4 -6 286 2 3 1203 250 255 25 37 chr15 81105242 81105347 -22389627 - RMER21B LTR ERV1 -273 569 522 3 1203 1233 116 5 26 chr15 81105567 81105726 -22389248 + B2_Mm1a SINE B2 1 160 -33 3 1203 285 51 0 0 chr15 81105726 81105765 -22389209 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 3 1203 1233 116 5 26 chr15 81105765 81105800 -22389174 + B2_Mm1a SINE B2 161 190 -3 3 1203 482 357 187 8 chr15 81105813 81106172 -22388802 + LTR16A1 LTR ERVL 4 426 -30 3 1203 922 199 116 116 chr15 81106238 81106417 -22388557 - MTE2a LTR MaLR -1 378 173 3 1203 750 101 0 0 chr15 81106417 81106526 -22388448 + (TCTA)n Simple_repeat Simple_repeat 2 110 0 3 1203 602 230 40 0 chr15 81106527 81106653 -22388321 - B1_Mur2 SINE Alu -14 135 5 3 1203 922 199 116 116 chr15 81106653 81106773 -22388201 - MTE2a LTR MaLR -207 172 77 3 1203 790 237 124 0 chr15 81106774 81106960 -22388014 + B3 SINE B2 2 210 -6 3 1203 874 179 13 27 chr15 81106967 81107116 -22387858 + B1_Mur3 SINE Alu 1 147 -2 3 1203 738 257 46 20 chr15 81107145 81107329 -22387645 + B3A SINE B2 24 194 -1 3 1203 310 236 32 53 chr15 81107343 81107437 -22387537 - MTE2a LTR MaLR -310 109 18 3 1203 282 311 58 53 chr15 81107759 81107954 -22387020 - MLT1C LTR MaLR -14 453 256 3 1203 600 248 6 98 chr15 81108086 81108269 -22386705 - MLT1C LTR MaLR -299 168 3 3 1203 322 285 131 0 chr15 81109142 81109279 -22385695 - MER5A1 DNA MER1_type -8 158 4 3 1203 329 211 59 69 chr15 81109429 81109531 -22385443 - L2 LINE L2 -607 2812 2712 3 1203 1979 129 3 47 chr15 81110148 81110466 -22384508 - ORR1A2 LTR MaLR -2 325 22 3 1203 912 115 0 108 chr15 81110475 81110641 -22384333 - B1_Mur4 SINE Alu -1 149 2 3 1203 270 136 0 0 chr15 81110722 81110766 -22384208 + (T)n Simple_repeat Simple_repeat 1 44 0 3 1203 1134 82 0 13 chr15 81110766 81110915 -22384059 - B1_Mus2 SINE Alu 0 147 1 3 1203 232 268 12 47 chr15 81110956 81111042 -22383932 - ID4 SINE ID 0 83 1 3 1203 200 180 20 20 chr15 81111372 81111423 -22383551 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 3 1203 1018 102 95 189 chr15 81111486 81111729 -22383245 + URR1A DNA MER1_type 7 226 0 3 1203 372 212 61 92 chr15 81111579 81111752 -22383222 - CYRA11_Mm Unknown Y-chromosome -286 331 157 3 1203 224 184 0 0 chr15 81111732 81111770 -22383204 - B1_Mur4 SINE Alu -60 90 53 3 1203 509 228 221 27 chr15 81111818 81111967 -22383007 - B3A SINE B2 -16 182 5 3 1203 503 168 31 21 chr15 81111974 81112071 -22382903 - ID_B1 SINE B4 -4 220 123 3 1203 21 0 0 0 chr15 81112152 81112173 -22382801 + AT_rich Low_complexity Low_complexity 1 21 0 3 1203 311 222 0 65 chr15 81112215 81112292 -22382682 + PB1D9 SINE Alu 49 120 0 3 1203 235 108 54 0 chr15 81112441 81112478 -22382496 - B1F SINE Alu -96 53 15 3 1203 406 209 22 154 chr15 81112578 81112714 -22382260 - ID_B1 SINE B4 -20 204 87 3 1203 647 152 17 34 chr15 81113639 81113816 -22381158 + (TATG)n Simple_repeat Simple_repeat 4 177 0 3 1203 631 139 34 23 chr15 81113786 81113963 -22381011 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 1203 647 144 42 0 chr15 81113977 81114144 -22380830 + (TG)n Simple_repeat Simple_repeat 2 175 0 3 1203 495 179 40 17 chr15 81114179 81114208 -22380766 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1203 450 94 0 0 chr15 81114208 81114272 -22380702 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 1203 495 179 40 17 chr15 81114272 81114418 -22380556 + (TG)n Simple_repeat Simple_repeat 1 150 0 3 1203 218 217 0 14 chr15 81114419 81114489 -22380485 + (TA)n Simple_repeat Simple_repeat 1 69 0 3 1203 631 231 179 0 chr15 81114514 81114687 -22380287 - B3 SINE B2 -2 214 11 3 1203 432 229 81 18 chr15 81115016 81115127 -22379847 + B3A SINE B2 2 119 -79 3 1203 29 28 0 0 chr15 81115152 81115188 -22379786 + AT_rich Low_complexity Low_complexity 1 36 0 3 1203 508 309 0 0 chr15 81115427 81115550 -22379424 + B1F1 SINE Alu 1 123 -26 3 1203 536 279 121 11 chr15 81115502 81115676 -22379298 + ID_B1 SINE B4 32 224 0 3 1203 469 234 53 0 chr15 81115762 81115856 -22379118 + PB1D10 SINE Alu 12 110 -7 3 1203 263 235 155 9 chr15 81115856 81115879 -22379095 + ID_B1 SINE B4 97 241 -51 3 1203 468 0 0 0 chr15 81116516 81116568 -22378406 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 1203 372 22 0 0 chr15 81116569 81116614 -22378360 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 3 1203 244 282 38 96 chr15 81116640 81116797 -22378177 + B1F SINE Alu 1 148 -1 3 1203 921 248 66 5 chr15 81116805 81117016 -22377958 + ID_B1 SINE B4 1 224 0 3 1203 1132 174 56 0 chr15 81117149 81117345 -22377629 + B3 SINE B2 3 209 -7 3 1203 252 268 0 0 chr15 81117677 81117759 -22377215 + (TG)n Simple_repeat Simple_repeat 1 82 0 3 1203 2516 74 6 9 chr15 81117970 81118309 -22376665 - Lx3_Mus LINE L1 0 7009 6672 4 1203 733 269 57 83 chr15 81118383 81118683 -22376291 - B4A SINE B4 0 292 1 4 1203 723 313 34 64 chr15 81118683 81118868 -22376106 - B4A SINE B4 -35 257 75 4 1203 306 0 0 0 chr15 81118868 81118902 -22376072 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 4 1203 723 313 34 64 chr15 81118902 81118981 -22375993 - B4A SINE B4 -218 74 2 4 1203 443 263 130 9 chr15 81118981 81119091 -22375883 + B1_Mur2 SINE Alu 26 149 0 4 1203 33 0 0 0 chr15 81119092 81119125 -22375849 + AT_rich Low_complexity Low_complexity 1 33 0 4 1203 215 341 49 0 chr15 81119172 81119254 -22375720 + MIRm SINE MIR 81 166 -110 4 1203 500 282 11 91 chr15 81119409 81119596 -22375378 - B4A SINE B4 -118 174 3 4 1203 283 307 68 0 chr15 81119606 81119694 -22375280 - MLT2C2 LTR ERVL -232 232 139 4 1203 239 205 68 114 chr15 81119722 81119810 -22375164 - ID SINE ID -139 85 2 4 1203 451 226 27 36 chr15 81119813 81119923 -22375051 - MLT2C2 LTR ERVL -352 112 4 4 1203 745 148 26 84 chr15 81119923 81120078 -22374896 + B1_Mus1 SINE Alu 2 147 -1 4 1203 926 264 14 0 chr15 81120116 81120328 -22374646 - B3 SINE B2 -1 215 1 4 1203 254 271 82 0 chr15 81120431 81120516 -22374458 + MLT1A0 LTR MaLR 263 354 -11 4 1203 874 177 77 10 chr15 81120726 81120920 -22374054 + B3 SINE B2 1 207 -9 4 1203 264 161 107 0 chr15 81121886 81121942 -22373032 - BC1_Mm scRNA scRNA -67 85 24 4 1203 228 372 10 72 chr15 81121960 81122154 -22372820 - MIRb SINE MIR -73 195 14 4 1203 1345 139 13 30 chr15 81122681 81122911 -22372063 - URR1A DNA MER1_type 0 226 1 4 1203 639 236 16 0 chr15 81123151 81123278 -22371696 + RSINE1 SINE B4 2 130 -35 4 1203 345 47 0 0 chr15 81123318 81123361 -22371613 + (CAAT)n Simple_repeat Simple_repeat 2 44 0 4 1203 387 0 0 0 chr15 81123405 81123448 -22371526 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1203 1015 262 0 0 chr15 81123461 81123663 -22371311 + B3 SINE B2 15 216 0 4 1203 890 284 26 4 chr15 81123716 81123942 -22371032 + B4A SINE B4 2 232 -60 4 1203 941 108 0 0 chr15 81123946 81124075 -22370899 + B1_Mus1 SINE Alu 10 138 -10 4 1203 198 209 0 0 chr15 81124075 81124118 -22370856 + (CAAT)n Simple_repeat Simple_repeat 4 46 0 4 1203 252 279 15 0 chr15 81124169 81124237 -22370737 + (CATA)n Simple_repeat Simple_repeat 1 69 0 4 1203 22 0 0 0 chr15 81124880 81124902 -22370072 + GC_rich Low_complexity Low_complexity 1 22 0 4 1203 264 250 11 91 chr15 81125082 81125170 -22369804 - ID4 SINE ID -1 82 2 4 1203 378 0 0 0 chr15 81125620 81125662 -22369312 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 1203 614 279 87 30 chr15 81125662 81125886 -22369088 + MLT2B1 LTR ERVL 140 473 -94 4 1203 423 310 69 15 chr15 81126220 81126423 -22368551 + MER20 DNA MER1_type 3 216 -3 4 1203 255 303 180 45 chr15 81126760 81127116 -22367858 - L2 LINE L2 -366 3053 2650 4 1203 397 205 353 17 chr15 81127350 81127469 -22367505 + RSINE1 SINE B4 3 161 -4 4 1203 2821 47 44 59 chr15 81127710 81128116 -22366858 - MTB LTR MaLR 0 400 1 4 1203 426 269 265 47 chr15 81128131 81128342 -22366632 - MER21B LTR ERV1 -104 759 503 4 1203 238 277 136 15 chr15 81128367 81128499 -22366475 - ORR1D1 LTR MaLR -4 370 223 4 1203 619 287 187 54 chr15 81128621 81129006 -22365968 - MER21B LTR ERV1 -356 507 72 4 1203 730 220 15 50 chr15 81129034 81129235 -22365739 - B3A SINE B2 -3 195 2 4 1203 517 164 237 17 chr15 81129276 81129394 -22365580 + B1_Mur4 SINE Alu 6 149 -1 4 1203 470 284 0 41 chr15 81129421 81129542 -22365432 - RSINE1 SINE B4 -28 137 22 4 1203 287 303 56 11 chr15 81129526 81129616 -22365358 - RSINE1 SINE B4 -67 98 5 4 1203 1207 42 14 0 chr15 81129746 81129890 -22365084 - B1_Mm SINE Alu 0 147 2 4 1203 598 213 78 20 chr15 81130027 81130180 -22364794 - RSINE1 SINE B4 0 165 4 4 1203 536 266 94 0 chr15 81130325 81130453 -22364521 - B1F2 SINE Alu 0 149 10 4 1203 929 164 7 0 chr15 81131320 81131466 -22363508 + B1_Mus1 SINE Alu 2 148 0 4 1203 1891 139 14 48 chr15 81131824 81132180 -22362794 + BGLII_B LTR ERVK 1 344 -97 4 1203 497 244 60 60 chr15 81132949 81133115 -22361859 + ID_B1 SINE B4 1 166 -58 4 1203 1263 213 81 38 chr15 81133114 81133460 -22361514 - ORR1D1 LTR MaLR -13 361 1 4 1204 259 258 0 16 chr15 81134044 81134107 -22360867 + B1F SINE Alu 87 148 -1 4 1204 930 115 58 0 chr15 81134112 81134251 -22360723 + B1_Mus1 SINE Alu 2 148 0 4 1204 717 249 62 21 chr15 81134791 81134984 -22359990 + B3 SINE B2 3 203 -13 4 1204 333 0 0 0 chr15 81134985 81135022 -22359952 + (TAA)n Simple_repeat Simple_repeat 3 39 0 4 1204 876 203 0 0 chr15 81135027 81135175 -22359799 + B1_Mus1 SINE Alu 1 148 0 4 1204 307 118 20 0 chr15 81135188 81135239 -22359735 - HAL1-3A_ME LINE L1 -824 2034 1983 4 1204 796 249 16 33 chr15 81135279 81135462 -22359512 - B3A SINE B2 -18 180 1 4 1204 246 353 60 16 chr15 81135517 81135671 -22359303 + L2c LINE L2 3210 3373 -2 4 1204 414 300 42 8 chr15 81135894 81136020 -22358954 + PB1D10 SINE Alu 1 128 -21 4 1204 394 168 0 186 chr15 81136081 81136205 -22358769 - B4A SINE B4 0 292 192 4 1204 312 210 98 12 chr15 81136372 81136454 -22358520 + RSINE1 SINE B4 48 136 -29 4 1204 844 152 97 19 chr15 81136442 81136596 -22358378 - B3 SINE B2 -50 166 1 4 1204 322 157 8 28 chr15 81136667 81136759 -22358215 + PB1D10 SINE Alu 59 148 -1 4 1204 407 152 0 12 chr15 81136973 81137053 -22357921 + (TG)n Simple_repeat Simple_repeat 1 79 0 4 1204 393 111 48 0 chr15 81137053 81137116 -22357858 - Lx8 LINE L1 -517 6956 6891 4 1204 352 282 90 79 chr15 81137254 81137443 -22357531 - B3A SINE B2 -6 192 2 4 1204 193 318 218 0 chr15 81137495 81137605 -22357369 + MIR3 SINE MIR 4 137 -71 4 1204 493 123 0 0 chr15 81137650 81137723 -22357251 + MTC LTR MaLR 1 73 -348 4 1204 1137 54 0 26 chr15 81137728 81137879 -22357095 + B1_Mus2 SINE Alu 1 147 0 4 1204 199 87 65 0 chr15 81137879 81137925 -22357049 + A-rich Low_complexity Low_complexity 6 54 0 4 1204 930 106 56 0 chr15 81137935 81138077 -22356897 + B1_Mur4 SINE Alu 1 150 0 4 1204 452 118 0 14 chr15 81138099 81138168 -22356806 + B1_Mur4 SINE Alu 78 145 -5 4 1204 241 121 0 0 chr15 81138169 81138202 -22356772 + B1_Mus2 SINE Alu 106 138 -9 4 1204 1857 161 10 19 chr15 81138248 81138558 -22356416 + MTC LTR MaLR 107 413 -8 4 1204 562 283 37 139 chr15 81138781 81139022 -22355952 - B4A SINE B4 0 292 78 4 1204 1102 88 0 20 chr15 81139022 81139173 -22355801 - B1_Mur4 SINE Alu 0 150 3 4 1204 562 283 37 139 chr15 81139173 81139255 -22355719 - B4A SINE B4 -215 77 2 4 1204 526 256 31 8 chr15 81139265 81139395 -22355579 - ID_B1 SINE B4 -13 211 79 4 1204 421 311 19 68 chr15 81139410 81139429 -22355545 - RSINE1 SINE B4 -6 159 141 4 1204 887 85 8 0 chr15 81139429 81139559 -22355415 + (TG)n Simple_repeat Simple_repeat 1 131 0 4 1204 421 311 19 68 chr15 81139559 81139701 -22355273 - RSINE1 SINE B4 -25 140 6 4 1204 290 146 42 0 chr15 81141283 81141331 -22353643 + MTE2a LTR MaLR 1 50 -329 4 1204 247 200 27 67 chr15 81141331 81141406 -22353568 - MLT2B1 LTR ERVL 0 567 496 4 1204 2206 230 64 88 chr15 81141477 81142254 -22352720 - MERVL_2A-int LTR ERVL -4014 1747 989 4 1204 1368 282 55 27 chr15 81142255 81142942 -22352032 - MERVL_2A-int LTR ERVL -4987 774 3 4 1204 870 302 42 122 chr15 81142944 81143509 -22351465 - MT2A LTR ERVL 0 533 14 4 1204 1250 230 58 119 chr15 81143468 81143789 -22351185 + MTD LTR MaLR 5 318 -101 4 1204 1254 27 7 0 chr15 81143789 81143935 -22351039 + B1_Mm SINE Alu 1 147 0 4 1204 1250 230 58 119 chr15 81143935 81144042 -22350932 + MTD LTR MaLR 319 407 -12 4 1204 272 179 104 0 chr15 81144053 81144120 -22350854 - U6 snRNA snRNA -30 77 4 4 1204 1554 274 60 83 chr15 81144153 81144222 -22350752 - Lx7 LINE L1 -1012 6684 6632 4 1204 1637 42 0 0 chr15 81144222 81144414 -22350560 + B2_Mm1a SINE B2 2 193 0 4 1204 1554 274 60 83 chr15 81144414 81144912 -22350062 - Lx7 LINE L1 -1065 6631 6130 4 1204 605 168 39 39 chr15 81145046 81145176 -22349798 + B1_Mur2 SINE Alu 20 149 0 4 1204 524 257 50 0 chr15 81145195 81145335 -22349639 - B1_Mur2 SINE Alu -2 147 1 4 1204 207 69 0 0 chr15 81145343 81145372 -22349602 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1204 35 0 0 0 chr15 81145460 81145495 -22349479 + AT_rich Low_complexity Low_complexity 1 35 0 4 1204 184 347 57 41 chr15 81145665 81145788 -22349186 - MIRc SINE MIR -123 145 21 4 1204 711 211 158 16 chr15 81145945 81146128 -22348846 + B3 SINE B2 2 210 -6 4 1204 351 0 0 0 chr15 81146135 81146174 -22348800 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 1204 1180 42 14 0 chr15 81146174 81146316 -22348658 - B1_Mus2 SINE Alu -3 144 1 4 1204 1394 56 67 0 chr15 81146316 81146495 -22348479 - B2_Mm1t SINE B2 0 193 2 4 1204 203 179 0 0 chr15 81146512 81146551 -22348423 + (CAGAGA)n Simple_repeat Simple_repeat 3 41 0 4 1204 192 345 86 8 chr15 81146708 81146825 -22348149 + MIRc SINE MIR 124 249 -19 4 1204 250 250 16 48 chr15 81146958 81147021 -22347953 - MIR SINE MIR -126 82 22 4 1204 715 229 21 0 chr15 81147355 81147499 -22347475 + B1_Mur2 SINE Alu 2 148 -1 4 1204 203 167 0 0 chr15 81147499 81147535 -22347439 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 4 1204 723 292 51 55 chr15 81147587 81147880 -22347094 + B4A SINE B4 1 292 0 4 1204 450 299 103 7 chr15 81148410 81148555 -22346419 - MER5A1 DNA MER1_type -7 159 1 4 1204 364 200 29 0 chr15 81148718 81148788 -22346186 - ORR1D1 LTR MaLR 0 384 313 4 1204 1155 48 7 20 chr15 81148788 81148938 -22346036 + B1_Mus1 SINE Alu 1 148 0 4 1204 242 29 29 0 chr15 81148959 81148994 -22345980 + (CAA)n Simple_repeat Simple_repeat 2 37 0 5 1204 1335 150 137 18 chr15 81149016 81149301 -22345673 - ORR1D1 LTR MaLR -55 319 1 4 1204 504 267 21 88 chr15 81150699 81150892 -22344082 - MER5A DNA MER1_type -8 181 2 5 1204 399 286 172 8 chr15 81151260 81151394 -22343580 - ID_B1 SINE B4 0 224 69 5 1204 880 158 27 20 chr15 81151452 81151601 -22343373 - B1_Mur4 SINE Alu 0 150 1 5 1204 23 33 0 0 chr15 81151601 81151631 -22343343 + AT_rich Low_complexity Low_complexity 1 30 0 5 1204 3113 158 29 8 chr15 81151734 81152245 -22342729 + RLTR12B LTR ERVK 1 522 -6 5 1204 513 158 12 0 chr15 81152249 81152331 -22342643 - B3 SINE B2 -133 83 1 5 1204 457 326 63 0 chr15 81152383 81152439 -22342535 - MER3 DNA MER1_type -3 206 151 5 1204 958 161 0 0 chr15 81152439 81152588 -22342386 + B1_Mur4 SINE Alu 2 150 0 5 1204 457 326 63 0 chr15 81152588 81152706 -22342268 - MER3 DNA MER1_type -59 150 22 5 1204 379 236 163 59 chr15 81152736 81152889 -22342085 + MIRc SINE MIR 66 234 -34 5 1204 423 260 48 0 chr15 81153303 81153407 -22341567 + B1F2 SINE Alu 41 149 0 5 1204 646 151 9 19 chr15 81153609 81153717 -22341257 - B1_Mur1 SINE Alu 0 149 43 5 1204 300 262 0 0 chr15 81153719 81153799 -22341175 - ID4_ SINE ID -1 82 3 5 1204 189 0 0 0 chr15 81153982 81154003 -22340971 + (C)n Simple_repeat Simple_repeat 1 21 0 5 1204 348 278 140 34 chr15 81154196 81154375 -22340599 - B3A SINE B2 0 198 1 5 1204 1413 71 11 26 chr15 81154943 81155132 -22339842 - B2_Mm1t SINE B2 -7 186 1 5 1204 385 132 145 14 chr15 81155155 81155224 -22339750 - ID4 SINE ID -2 81 4 5 1204 291 330 18 35 chr15 81155228 81155341 -22339633 + L2 LINE L2 2642 2752 -667 5 1204 3150 133 74 93 chr15 81155373 81156086 -22338888 - RMER6A LTR ERVK 0 756 57 5 1204 691 327 33 70 chr15 81156116 81156389 -22338585 - B4A SINE B4 -10 282 20 5 1204 1405 81 32 0 chr15 81156969 81157154 -22337820 + B2_Mm2 SINE B2 1 191 -4 5 1204 266 217 43 0 chr15 81157950 81158019 -22336955 - PB1D10 SINE Alu 0 117 46 5 1204 1221 34 0 14 chr15 81158261 81158409 -22336565 + B1_Mus1 SINE Alu 3 148 0 5 1204 206 121 0 0 chr15 81158411 81158444 -22336530 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1204 286 224 71 53 chr15 81158508 81158621 -22336353 + PB1D10 SINE Alu 2 116 -1 5 1204 235 279 0 71 chr15 81158705 81158790 -22336184 + PB1D10 SINE Alu 4 82 -35 5 1204 319 257 66 9 chr15 81158790 81158896 -22336078 + PB1D7 SINE Alu 2 113 -7 5 1204 635 188 186 11 chr15 81158912 81159100 -22335874 + ID_B1 SINE B4 2 222 -2 5 1204 323 272 25 0 chr15 81159882 81159963 -22335011 + ID4 SINE ID 1 83 0 5 1204 297 296 71 16 chr15 81162138 81162265 -22332709 + LTR48 LTR ERV1 292 425 -219 5 1204 1298 34 0 0 chr15 81162415 81162562 -22332412 - B1_Mm SINE Alu 0 147 1 5 1204 335 256 67 0 chr15 81162623 81162713 -22332261 + LTR48 LTR ERV1 692 787 0 5 1204 385 296 90 24 chr15 81162841 81163007 -22331967 + B4A SINE B4 116 292 0 5 1204 1015 170 8 121 chr15 81163438 81163686 -22331288 + URR1B DNA MER1_type 2 221 -4 5 1204 409 247 56 117 chr15 81164044 81164223 -22330751 - B3 SINE B2 -2 214 47 5 1204 366 348 35 28 chr15 81164434 81164576 -22330398 + RMER15 LTR ERVL 337 479 -96 5 1204 660 288 108 37 chr15 81164819 81165115 -22329859 + RMER15-int LTR ERVL 227 543 -4456 5 1204 748 87 174 163 chr15 81165120 81165298 -22329676 + B2_Mm2 SINE B2 2 181 -14 5 1204 374 148 0 0 chr15 81165331 81165385 -22329589 + B2_Mm2 SINE B2 48 101 -94 5 1204 28 48 0 0 chr15 81165397 81165439 -22329535 + AT_rich Low_complexity Low_complexity 1 42 0 5 1204 235 213 0 0 chr15 81165616 81165663 -22329311 + ORR1E LTR MaLR 146 192 -167 5 1204 247 339 79 0 chr15 81165663 81165790 -22329184 + L2a LINE L2 2730 2866 -553 5 1204 288 134 202 79 chr15 81165944 81166033 -22328941 + B1_Mur3 SINE Alu 49 148 -1 5 1204 295 343 68 24 chr15 81166048 81166254 -22328720 + L2a LINE L2 3161 3375 -51 5 1204 291 292 8 50 chr15 81166340 81166459 -22328515 + L1MB2 LINE L1 5270 5383 -797 5 1204 1178 260 123 25 chr15 81167533 81168046 -22326928 + L1MB2 LINE L1 5609 6171 0 5 1204 1227 75 0 0 chr15 81168055 81168202 -22326772 + B1_Mus1 SINE Alu 2 148 0 5 1204 285 29 0 0 chr15 81168202 81168236 -22326738 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1204 324 372 14 42 chr15 81168586 81168729 -22326245 + ORR1E LTR MaLR 1 139 -220 5 1204 306 225 325 0 chr15 81168745 81168865 -22326109 + ORR1E LTR MaLR 219 377 -2 5 1204 276 378 41 0 chr15 81169039 81169137 -22325837 - PB1 SINE Alu -19 108 7 5 1204 214 306 0 65 chr15 81169161 81169238 -22325736 + ID4_ SINE ID 6 77 -6 5 1204 839 121 0 0 chr15 81169172 81169288 -22325686 + B2_Mm2 SINE B2 14 129 -66 5 1204 601 229 76 0 chr15 81169317 81169435 -22325539 + B1_Mur1 SINE Alu 18 144 -5 5 1204 748 140 144 23 chr15 81169861 81169993 -22324981 + B1_Mus1 SINE Alu 1 148 0 5 1204 33 0 0 0 chr15 81170019 81170052 -22324922 + AT_rich Low_complexity Low_complexity 1 33 0 5 1204 862 236 108 0 chr15 81170056 81170251 -22324723 + B3 SINE B2 1 216 0 5 1204 607 210 219 38 chr15 81170734 81170917 -22324057 - B3 SINE B2 0 216 1 5 1204 578 294 26 73 chr15 81170979 81171170 -22323804 - B3A SINE B2 -16 182 1 5 1204 1036 202 64 5 chr15 81171269 81171473 -22323501 - B3 SINE B2 0 216 1 5 1204 334 312 141 55 chr15 81171738 81172039 -22322935 + L1MC4a LINE L1 5541 5861 -2021 5 1204 1231 209 5 19 chr15 81172039 81172254 -22322720 + B3 SINE B2 1 212 -4 5 1204 334 312 141 55 chr15 81172254 81172356 -22322618 + L1MC4a LINE L1 5862 5979 -1903 5 1204 212 291 0 0 chr15 81172449 81172504 -22322470 + CT-rich Low_complexity Low_complexity 2 56 0 5 1204 427 251 89 50 chr15 81172650 81172791 -22322183 + B3A SINE B2 67 215 -1 5 1204 240 296 70 0 chr15 81173239 81173310 -22321664 + ID4 SINE ID 5 80 -3 5 1204 397 301 70 88 chr15 81174199 81174414 -22320560 + ID_B1 SINE B4 6 216 -8 5 1204 229 235 56 42 chr15 81174351 81174422 -22320552 + B1_Mur1 SINE Alu 76 147 -2 5 1204 691 245 13 13 chr15 81174684 81174841 -22320133 - B3 SINE B2 -35 181 25 5 1204 755 115 62 59 chr15 81174853 81175007 -22319967 - B2_Mm2 SINE B2 -11 205 15 5 1204 267 213 0 0 chr15 81175048 81175095 -22319879 - Lx5 LINE L1 -487 6563 6517 5 1204 1167 239 139 24 chr15 81175093 81175466 -22319508 + Lx6 LINE L1 7017 7432 -28 5 1204 839 214 50 0 chr15 81175850 81175990 -22318984 + B1_Mur2 SINE Alu 1 147 -2 5 1204 261 180 0 0 chr15 81176099 81176149 -22318825 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1204 655 253 93 0 chr15 81176310 81176460 -22318514 + RSINE1 SINE B4 2 165 0 5 1204 486 256 124 0 chr15 81176495 81176624 -22318350 + B1_Mur2 SINE Alu 5 149 0 5 1204 551 306 72 56 chr15 81176688 81176856 -22318118 + MLT1D LTR MaLR 182 347 -158 5 1204 1228 127 106 14 chr15 81176856 81177063 -22317911 - URR1A DNA MER1_type 0 226 1 5 1204 551 306 72 56 chr15 81177063 81177213 -22317761 + MLT1D LTR MaLR 348 505 0 5 1204 315 0 0 0 chr15 81177414 81177449 -22317525 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1204 353 22 0 21 chr15 81177449 81177495 -22317479 + (GA)n Simple_repeat Simple_repeat 2 47 0 5 1204 259 281 51 20 chr15 81177596 81177694 -22317280 + L1MEd LINE L1 54 154 -5965 5 1204 23 0 0 0 chr15 81178398 81178421 -22316553 + AT_rich Low_complexity Low_complexity 1 23 0 5 1204 261 0 0 0 chr15 81178444 81178473 -22316501 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 1204 360 111 0 0 chr15 81178473 81178536 -22316438 + (GA)n Simple_repeat Simple_repeat 2 64 0 5 1204 639 173 192 31 chr15 81178627 81178788 -22316186 - B3A SINE B2 -11 187 1 5 1204 677 199 48 34 chr15 81178812 81178958 -22316016 - B1_Mur1 SINE Alu -1 148 1 5 1204 213 241 34 17 chr15 81178991 81179050 -22315924 - ID_B1 SINE B4 -78 146 87 5 1204 3225 78 5 2 chr15 81179050 81179449 -22315525 + MTB LTR MaLR 1 400 0 5 1204 360 0 0 0 chr15 81180013 81180053 -22314921 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1204 1287 48 7 0 chr15 81180154 81180300 -22314674 + B1_Mus2 SINE Alu 1 147 0 5 1204 1206 91 92 54 chr15 81180415 81180600 -22314374 + B2_Mm2 SINE B2 3 194 -1 5 1204 1445 78 15 25 chr15 81180630 81180827 -22314147 + B2_Mm2 SINE B2 1 195 0 5 1204 419 284 31 4 chr15 81181149 81181263 -22313711 + ID_B1 SINE B4 4 126 -166 5 1204 218 105 0 26 chr15 81181282 81181321 -22313653 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 5 1204 1102 184 43 14 chr15 81181333 81181543 -22313431 + B3 SINE B2 1 216 0 5 1204 852 226 14 0 chr15 81181559 81181705 -22313269 - B1_Mus1 SINE Alu 0 148 1 5 1204 400 248 90 41 chr15 81181743 81181865 -22313109 + B1F SINE Alu 2 129 -20 5 1204 238 342 12 12 chr15 81181882 81181962 -22313012 + Charlie1 DNA MER1_type 8 87 -2694 5 1204 632 263 23 0 chr15 81181962 81182095 -22312879 - RSINE1 SINE B4 -28 137 2 5 1204 341 279 25 0 chr15 81182095 81182165 -22312809 - B1F1 SINE Alu -77 72 1 5 1204 403 331 7 35 chr15 81182443 81182584 -22312390 - ID_B1 SINE B4 0 224 88 5 1204 22 35 0 0 chr15 81182653 81182682 -22312292 + AT_rich Low_complexity Low_complexity 1 29 0 5 1204 769 203 0 0 chr15 81182896 81183024 -22311950 - B1_Mus2 SINE Alu -18 129 2 5 1204 232 226 0 54 chr15 81183098 81183154 -22311820 + MER21B LTR ERV1 19 71 -792 5 1204 795 239 19 11 chr15 81183190 81183375 -22311599 + B3 SINE B2 9 215 -1 5 1204 674 247 230 12 chr15 81183390 81183867 -22311107 - L1M4 LINE L1 -1077 5066 4481 5 1204 341 245 61 0 chr15 81183894 81183992 -22310982 - L1M4 LINE L1 -3174 2972 2869 5 1204 417 274 150 25 chr15 81184122 81184242 -22310732 + RSINE1 SINE B4 31 165 0 6 1204 762 202 16 0 chr15 81184341 81184470 -22310504 - ID_B1 SINE B4 -4 220 90 6 1204 491 260 0 10 chr15 81185022 81185123 -22309851 + RSINE1 SINE B4 28 127 -38 6 1204 228 184 0 0 chr15 81185142 81185191 -22309783 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 6 1204 401 141 267 12 chr15 81185571 81185657 -22309317 - PB1D9 SINE Alu -12 108 1 6 1204 403 235 16 65 chr15 81185699 81185822 -22309152 - PB1D10 SINE Alu 0 117 1 6 1204 964 208 18 45 chr15 81185896 81186118 -22308856 - B3 SINE B2 0 216 1 6 1204 5924 63 7 35 chr15 81186265 81187113 -22307861 + RLTR22_Mus LTR ERVK 1 824 -984 6 1204 1522 142 51 0 chr15 81187304 81187557 -22307417 + RLTR22_Mus LTR ERVK 1543 1808 0 6 1204 469 122 85 12 chr15 81187645 81187745 -22307229 - B1_Mur4 SINE Alu -5 145 5 6 1204 1106 86 7 0 chr15 81188052 81188204 -22306770 + B2_Mm2 SINE B2 1 153 -42 6 1204 227 259 0 0 chr15 81188390 81188444 -22306530 + (ATG)n Simple_repeat Simple_repeat 3 56 0 6 1204 326 89 0 0 chr15 81188495 81188540 -22306434 + PB1D10 SINE Alu 45 89 -28 6 1204 333 0 0 0 chr15 81188540 81188577 -22306397 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 1204 369 330 35 9 chr15 81188585 81188698 -22306276 + PB1D10 SINE Alu 1 116 -1 6 1204 382 287 117 23 chr15 81188937 81189108 -22305866 + MER58A DNA MER1_type 2 188 -36 6 1204 359 317 120 57 chr15 81189306 81189674 -22305300 + L2 LINE L2 1917 2307 -1112 6 1204 195 335 159 28 chr15 81189682 81189934 -22305040 + L2 LINE L2 2430 2714 -705 6 1204 438 242 218 0 chr15 81191646 81191770 -22303204 + B3A SINE B2 1 151 -47 6 1204 267 31 0 0 chr15 81191774 81191806 -22303168 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1204 334 211 70 0 chr15 81191833 81191904 -22303070 + ID_B1 SINE B4 146 221 -3 6 1204 2947 34 42 10 chr15 81192369 81192752 -22302222 - MTB LTR MaLR -5 395 1 6 1204 215 147 232 14 chr15 81192855 81192924 -22302050 - B3A SINE B2 -114 84 1 6 1204 323 274 65 9 chr15 81193114 81193221 -22301753 + PB1D10 SINE Alu 1 113 -4 6 1204 204 138 0 0 chr15 81193472 81193501 -22301473 + MIR SINE MIR 115 143 -119 6 1204 246 233 0 0 chr15 81193891 81193934 -22301040 - PB1D10 SINE Alu -20 97 55 6 1204 207 0 0 0 chr15 81195244 81195267 -22299707 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1204 226 294 8 107 chr15 81196334 81196456 -22298518 + B3A SINE B2 81 190 -8 6 1204 241 347 88 57 chr15 81196462 81196621 -22298353 + B3 SINE B2 28 191 -25 6 1204 338 200 33 91 chr15 81197175 81197296 -22297678 + MT2B LTR ERVL 165 278 -323 6 1204 903 94 8 0 chr15 81197189 81197317 -22297657 + B1_Mur4 SINE Alu 16 144 -6 6 1204 2367 134 105 3 chr15 81197772 81198154 -22296820 - MTC LTR MaLR 0 421 1 6 1204 312 349 83 19 chr15 81198299 81198407 -22296567 - B1F1 SINE Alu -33 116 2 6 1204 288 330 23 85 chr15 81198517 81198646 -22296328 - B3A SINE B2 -7 191 71 6 1204 246 32 0 0 chr15 81198930 81198961 -22296013 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 6 1204 339 226 126 97 chr15 81199139 81199242 -22295732 + B3 SINE B2 6 111 -105 6 1204 1075 215 5 5 chr15 81199307 81199499 -22295475 - B3 SINE B2 -23 193 2 6 1204 861 181 14 0 chr15 81200214 81200358 -22294616 + B1_Mus2 SINE Alu 2 147 0 6 1204 243 0 0 0 chr15 81200634 81200661 -22294313 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1204 2363 148 205 10 chr15 81200776 81201255 -22293719 + RMER15 LTR ERVL 4 575 0 6 1204 180 77 0 0 chr15 81201419 81201445 -22293529 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 6 1204 305 224 17 0 chr15 81201468 81201526 -22293448 - B1F1 SINE Alu -90 59 1 6 1204 214 125 17 35 chr15 81201768 81201826 -22293148 + A-rich Low_complexity Low_complexity 4 60 0 6 1204 1029 106 28 7 chr15 81202087 81202230 -22292744 + B1_Mus1 SINE Alu 2 147 -1 6 1204 192 152 0 0 chr15 81202231 81202264 -22292710 + A-rich Low_complexity Low_complexity 1 33 0 6 1204 880 154 22 0 chr15 81202281 81202417 -22292557 + B1_Mur4 SINE Alu 11 149 -1 6 1204 510 262 96 59 chr15 81202553 81202953 -22292021 + RLTR15 LTR ERVK 2 303 -225 6 1204 289 164 32 16 chr15 81203027 81203089 -22291885 + RMER15 LTR ERVL 404 466 -109 6 1204 721 285 62 10 chr15 81203501 81203696 -22291278 + B3 SINE B2 1 205 -11 6 1204 1184 68 0 13 chr15 81203716 81203865 -22291109 + B1_Mus1 SINE Alu 1 147 -1 6 1204 261 323 72 10 chr15 81204143 81204240 -22290734 + RSINE1 SINE B4 2 104 -61 6 1204 265 269 28 69 chr15 81204422 81204494 -22290480 - ID SINE ID -154 70 2 6 1204 756 199 7 14 chr15 81204531 81204669 -22290305 + B1_Mus1 SINE Alu 11 147 -1 6 1204 260 265 51 0 chr15 81204720 81204837 -22290137 + ORR1B1-int LTR MaLR 632 754 -755 6 1204 933 122 14 0 chr15 81204737 81204876 -22290098 + B1_Mus1 SINE Alu 8 148 0 6 1204 334 197 79 38 chr15 81204981 81205087 -22289887 - PB1D9 SINE Alu -1 119 1 6 1204 237 289 25 62 chr15 81205017 81205098 -22289876 - B4A SINE B4 -140 152 75 6 1204 646 218 41 34 chr15 81205436 81205583 -22289391 + B1_Mus1 SINE Alu 1 148 0 6 1204 1480 76 27 0 chr15 81205735 81205919 -22289055 - B2_Mm1t SINE B2 -3 190 2 6 1204 804 157 37 0 chr15 81206057 81206191 -22288783 + B1_Mur4 SINE Alu 5 143 -7 6 1204 1613 43 5 0 chr15 81207128 81207314 -22287660 - B2_Mm1a SINE B2 -5 188 2 6 1204 1289 40 0 13 chr15 81207498 81207648 -22287326 - B1_Mus1 SINE Alu 0 148 1 6 1204 248 279 172 73 chr15 81207737 81207888 -22287086 - B4 SINE B4 -8 284 119 6 1204 397 258 19 108 chr15 81207907 81207922 -22287052 - B4 SINE B4 -10 214 180 6 1204 654 157 42 42 chr15 81207922 81208042 -22286932 - B1_Mur4 SINE Alu -29 121 2 6 1204 397 258 19 108 chr15 81208042 81208096 -22286878 - B4 SINE B4 -10 179 45 6 1204 843 245 50 30 chr15 81208772 81208974 -22286000 + B3 SINE B2 1 206 -10 6 1204 308 352 40 32 chr15 81209008 81209134 -22285840 + B1F1 SINE Alu 7 133 -16 6 1204 795 216 124 6 chr15 81209214 81209391 -22285583 + B3 SINE B2 9 206 -10 6 1204 720 236 0 35 chr15 81209424 81209569 -22285405 + B1_Mus1 SINE Alu 3 142 -6 6 1204 582 284 14 85 chr15 81209751 81209963 -22285011 - B3A SINE B2 -1 197 1 6 1204 596 252 49 0 chr15 81210020 81210143 -22284831 - RSINE1 SINE B4 -34 131 3 6 1204 362 250 27 11 chr15 81210340 81210430 -22284544 + B1_Mur2 SINE Alu 26 141 -8 6 1204 244 277 189 47 chr15 81210697 81210803 -22284171 - RSINE1 SINE B4 -40 125 5 6 1204 238 167 0 32 chr15 81210912 81210974 -22284000 + (CATA)n Simple_repeat Simple_repeat 4 63 0 6 1204 21 0 0 0 chr15 81211165 81211186 -22283788 + AT_rich Low_complexity Low_complexity 1 21 0 6 1204 230 308 100 108 chr15 81211370 81211490 -22283484 + PB1D7 SINE Alu 2 120 0 6 1204 368 194 0 117 chr15 81211609 81211720 -22283254 + MT2B LTR ERVL 160 257 -344 6 1204 922 151 0 0 chr15 81211626 81211765 -22283209 + B1_Mur2 SINE Alu 11 149 0 6 1204 255 286 26 97 chr15 81211861 81211890 -22283084 + ID_B1 SINE B4 61 204 -20 6 1204 343 254 56 32 chr15 81211890 81212016 -22282958 + B1F SINE Alu 1 129 -20 6 1204 1330 90 35 46 chr15 81212340 81212537 -22282437 + B2_Mm2 SINE B2 1 195 0 6 1204 1186 61 18 24 chr15 81212537 81212705 -22282269 + B2_Mm2 SINE B2 29 195 0 6 1204 723 213 0 37 chr15 81212718 81212879 -22282095 + B3 SINE B2 53 207 -9 6 1204 453 306 82 7 chr15 81212910 81213045 -22281929 - RSINE1 SINE B4 -19 146 2 6 1204 1307 27 0 7 chr15 81213939 81214087 -22280887 + B1_Mus2 SINE Alu 1 147 0 6 1204 295 39 0 73 chr15 81214087 81214142 -22280832 + (GAAAA)n Simple_repeat Simple_repeat 5 55 0 6 1204 641 198 16 57 chr15 81214164 81214287 -22280687 + B1_Mur2 SINE Alu 17 134 -15 6 1204 284 251 0 140 chr15 81214452 81214576 -22280398 + B1_Mus1 SINE Alu 12 118 -2 6 1204 1623 33 49 0 chr15 81214689 81214873 -22280101 + B2_Mm1a SINE B2 1 193 0 6 1204 362 320 34 0 chr15 81214945 81215092 -22279882 - L1MA5 LINE L1 -383 5917 5766 6 1204 1238 211 95 37 chr15 81215097 81215446 -22279528 + ORR1C2 LTR MaLR 4 372 -12 6 1204 305 203 25 38 chr15 81215447 81215539 -22279435 - L1MA5 LINE L1 -536 5767 5677 6 1204 971 99 56 0 chr15 81215682 81215824 -22279150 + B1_Mur4 SINE Alu 1 150 0 6 1204 181 75 0 48 chr15 81215826 81215868 -22279106 + (CAAAAA)n Simple_repeat Simple_repeat 1 40 0 6 1204 22 0 0 0 chr15 81216285 81216307 -22278667 + AT_rich Low_complexity Low_complexity 1 22 0 6 1204 180 0 0 0 chr15 81216324 81216344 -22278630 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 6 1204 292 235 0 0 chr15 81216710 81216761 -22278213 + B3 SINE B2 80 130 -86 6 1204 1057 151 20 46 chr15 81216849 81217044 -22277930 + B2_Mm2 SINE B2 1 190 -5 6 1204 1308 34 0 0 chr15 81217051 81217197 -22277777 + B1_Mus2 SINE Alu 2 147 0 6 1204 277 254 153 55 chr15 81217422 81217605 -22277369 + L1M5 LINE L1 4623 4823 -1323 6 1204 282 274 137 0 chr15 81217877 81217972 -22277002 + PB1D10 SINE Alu 5 112 -5 6 1204 339 292 31 70 chr15 81218334 81218372 -22276602 + MT2B LTR ERVL 123 155 -446 6 1204 500 202 10 22 chr15 81218372 81218490 -22276484 + B1_Mus2 SINE Alu 1 120 0 7 1204 231 282 113 104 chr15 81219110 81219225 -22275749 + B3 SINE B2 99 214 -2 6 1204 1219 49 7 7 chr15 81219246 81219383 -22275591 + B1_Mus2 SINE Alu 1 138 -9 7 1204 243 79 0 0 chr15 81219383 81219421 -22275553 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 7 1204 540 229 48 16 chr15 81219550 81219674 -22275300 + RSINE1 SINE B4 2 129 -36 7 1204 248 238 197 8 chr15 81219759 81219886 -22275088 + Charlie5 DNA MER1_type 440 590 -2034 7 1204 484 229 66 11 chr15 81219893 81220015 -22274959 + B1F SINE Alu 30 150 0 7 1204 336 188 36 48 chr15 81220280 81220364 -22274610 - RLTR31_Mm LTR ERVK 0 561 479 7 1204 772 223 24 18 chr15 81220359 81220528 -22274446 + RLTR17 LTR ERVK 441 610 -82 7 1204 505 232 35 18 chr15 81221027 81221141 -22273833 - PB1D9 SINE Alu -2 118 3 7 1204 576 160 163 31 chr15 81221461 81221590 -22273384 + B1_Mur1 SINE Alu 2 147 -2 7 1204 647 289 7 21 chr15 81221590 81221735 -22273239 + RSINE1 SINE B4 8 150 -15 7 1204 940 176 0 7 chr15 81221782 81221931 -22273043 + B1_Mur3 SINE Alu 1 148 -1 7 1204 1643 53 0 16 chr15 81221985 81222178 -22272796 + B2_Mm1t SINE B2 2 191 -2 7 1204 23 0 0 0 chr15 81222181 81222204 -22272770 + AT_rich Low_complexity Low_complexity 1 23 0 7 1204 1688 147 134 27 chr15 81222287 81222616 -22272358 + ORR1C2 LTR MaLR 17 380 -4 7 1204 1222 48 7 20 chr15 81223351 81223501 -22271473 + B1_Mus1 SINE Alu 1 148 0 7 1204 439 288 33 11 chr15 81224140 81224298 -22270676 + B3 SINE B2 1 162 -33 7 1204 189 214 0 0 chr15 81224308 81224350 -22270624 + (TA)n Simple_repeat Simple_repeat 1 42 0 7 1204 587 259 21 7 chr15 81224364 81224504 -22270470 - B3 SINE B2 -50 166 25 7 1204 244 231 164 30 chr15 81224538 81224605 -22270369 - ID_B1 SINE B4 -58 166 91 7 1204 645 194 48 0 chr15 81224807 81224931 -22270043 + B3 SINE B2 1 130 -86 7 1204 201 39 0 0 chr15 81224982 81225008 -22269966 + (T)n Simple_repeat Simple_repeat 1 26 0 7 1204 308 241 152 30 chr15 81225183 81225380 -22269594 + L1MC4 LINE L1 7456 7676 -366 7 1204 21 0 0 0 chr15 81225514 81225535 -22269439 + AT_rich Low_complexity Low_complexity 1 21 0 7 1204 226 264 137 14 chr15 81226017 81226090 -22268884 + ID SINE ID 3 84 -140 7 1204 694 234 20 7 chr15 81226357 81226503 -22268471 + B1_Mur1 SINE Alu 1 148 -1 7 1204 481 195 67 56 chr15 81226783 81226910 -22268064 - PB1D9 SINE Alu -22 126 5 7 1204 402 208 204 62 chr15 81227483 81227597 -22267377 - PB1 SINE Alu -18 131 12 7 1204 620 178 105 30 chr15 81227703 81227836 -22267138 - B1_Mus1 SINE Alu 0 148 6 7 1204 560 269 86 81 chr15 81228103 81228289 -22266685 + B3 SINE B2 2 188 -7 7 1204 259 336 83 38 chr15 81228403 81228421 -22266553 + B4 SINE B4 67 83 -209 7 1204 666 242 131 45 chr15 81228421 81228620 -22266354 + B3 SINE B2 1 216 0 7 1204 472 246 189 8 chr15 81228622 81228749 -22266225 + PB1D9 SINE Alu 1 150 0 7 1204 21 0 0 0 chr15 81228749 81228770 -22266204 + AT_rich Low_complexity Low_complexity 1 21 0 7 1204 1242 28 0 46 chr15 81231101 81231245 -22263729 + B1_Mus1 SINE Alu 1 140 -8 7 1204 330 26 0 0 chr15 81231245 81231284 -22263690 + (GA)n Simple_repeat Simple_repeat 2 40 0 7 1204 21 0 0 0 chr15 81232219 81232240 -22262734 + AT_rich Low_complexity Low_complexity 1 21 0 7 1204 22 35 0 0 chr15 81232325 81232354 -22262620 + AT_rich Low_complexity Low_complexity 1 29 0 7 1204 1152 181 22 47 chr15 81232448 81232680 -22262294 - URR1A DNA MER1_type 0 226 1 7 1204 520 250 18 66 chr15 81232680 81232697 -22262277 + ID_B1 SINE B4 66 126 -98 7 1204 702 212 20 27 chr15 81232697 81232743 -22262231 + B1_Mur2 SINE Alu 1 45 -104 7 1204 3247 50 52 0 chr15 81232743 81233127 -22261847 - MTB_Mm LTR MaLR 0 407 4 7 1204 520 250 18 66 chr15 81233127 81233230 -22261744 + ID_B1 SINE B4 127 224 0 7 1204 356 94 0 55 chr15 81233421 81233496 -22261478 + B1_Mm SINE Alu 45 142 -5 7 1204 1566 37 21 16 chr15 81233509 81233700 -22261274 + B2_Mm2 SINE B2 2 193 -2 7 1204 1150 71 14 0 chr15 81233751 81233891 -22261083 + B1_Mus2 SINE Alu 1 142 -5 7 1204 449 289 73 4 chr15 81234676 81234828 -22260146 + ID_B1 SINE B4 84 248 -44 7 1204 199 306 75 70 chr15 81235401 81235615 -22259359 + L2 LINE L2 2576 2790 -629 7 1204 266 213 82 0 chr15 81235976 81236037 -22258937 + MT2B2 LTR ERVL 175 240 -344 7 1204 630 139 0 10 chr15 81235985 81236087 -22258887 + B1_Mus1 SINE Alu 34 134 -14 7 1204 557 224 152 95 chr15 81236486 81236782 -22258192 - L1MB2 LINE L1 -34 6137 5825 7 1204 273 262 49 13 chr15 81236910 81237021 -22257953 - L1MB2 LINE L1 -388 5791 5679 7 1204 659 243 0 33 chr15 81237345 81237498 -22257476 + B1_Mur1 SINE Alu 1 148 -1 7 1204 222 222 0 0 chr15 81237646 81237691 -22257283 + CT-rich Low_complexity Low_complexity 2 46 0 7 1204 791 200 0 23 chr15 81238965 81239098 -22255876 - B1_Mus1 SINE Alu -18 130 1 7 1204 779 155 118 53 chr15 81239144 81239314 -22255660 + B2_Mm2 SINE B2 1 181 -14 7 1204 1531 82 0 30 chr15 81239329 81239530 -22255444 + B2_Mm2 SINE B2 1 195 0 7 1204 1459 81 16 5 chr15 81239641 81239828 -22255146 + B2_Mm2 SINE B2 1 189 -6 7 1204 531 222 20 0 chr15 81239913 81240012 -22254962 + PB1D7 SINE Alu 11 111 -9 7 1204 294 271 219 8 chr15 81240012 81240036 -22254938 + B4A SINE B4 96 244 -48 7 1204 729 162 28 42 chr15 81240061 81240203 -22254771 + B1_Mur4 SINE Alu 11 150 0 7 1204 368 263 132 0 chr15 81240615 81240729 -22254245 + B3 SINE B2 46 174 -42 7 1204 833 177 7 7 chr15 81240751 81240893 -22254081 - B1_Mus1 SINE Alu 0 148 7 7 1204 183 74 0 0 chr15 81240914 81240926 -22254048 + (A)n Simple_repeat Simple_repeat 1 12 0 7 1204 1240 35 21 0 chr15 81240926 81241070 -22253904 + B1_Mus2 SINE Alu 1 147 0 7 1204 183 74 0 0 chr15 81241070 81241084 -22253890 + (A)n Simple_repeat Simple_repeat 1 14 0 7 1204 330 269 43 135 chr15 81241761 81241924 -22253050 + B1_Mur2 SINE Alu 1 148 -1 7 1204 193 53 25 50 chr15 81241930 81241970 -22253004 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 7 1204 254 26 53 0 chr15 81242356 81242394 -22252580 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 7 1204 1001 136 14 0 chr15 81242401 81242541 -22252433 - B1_Mur4 SINE Alu -8 142 1 7 1204 21 36 0 0 chr15 81242548 81242576 -22252398 + AT_rich Low_complexity Low_complexity 1 28 0 7 1204 601 345 46 30 chr15 81242775 81242972 -22252002 + B4A SINE B4 88 287 -5 7 1204 606 125 0 0 chr15 81243303 81243391 -22251583 - B1_Mur2 SINE Alu -7 142 55 7 1204 1783 168 394 2 chr15 81243512 81244038 -22250936 - RMER19A LTR ERVK -2 735 4 7 1204 188 311 175 70 chr15 81244603 81244717 -22250257 + L2b LINE L2 3219 3344 -31 7 1204 270 0 0 0 chr15 81245181 81245211 -22249763 + (TAA)n Simple_repeat Simple_repeat 2 31 0 7 1204 705 69 0 10 chr15 81245273 81245369 -22249605 - B2_Mm1t SINE B2 -2 191 96 7 1204 1483 50 50 0 chr15 81245369 81245549 -22249425 + B2_Mm1t SINE B2 1 189 -4 7 1204 984 210 92 0 chr15 81245564 81245759 -22249215 - B3 SINE B2 -3 213 1 7 1204 251 114 0 22 chr15 81247021 81247066 -22247908 + (CATA)n Simple_repeat Simple_repeat 1 44 0 7 1204 368 253 11 11 chr15 81247220 81247307 -22247667 + PB1D9 SINE Alu 1 87 -33 7 1204 779 220 150 79 chr15 81247307 81247687 -22247287 - RLTRETN_Mm LTR ERVK -2 407 1 7 1204 329 167 0 0 chr15 81247689 81247743 -22247231 + B1_Mur2 SINE Alu 81 134 -15 7 1204 1192 81 0 26 chr15 81248100 81248253 -22246721 - B1_Mur4 SINE Alu -1 149 1 7 1204 1598 59 0 5 chr15 81248268 81248455 -22246519 + B2_Mm2 SINE B2 2 187 -8 7 1204 792 182 15 0 chr15 81248493 81248625 -22246349 + B3 SINE B2 2 135 -81 7 1204 317 152 0 29 chr15 81248725 81248793 -22246181 + GA-rich Low_complexity Low_complexity 1 66 0 7 1204 290 301 35 26 chr15 81248822 81248938 -22246036 - PB1D9 SINE Alu -3 117 1 7 1204 327 188 194 68 chr15 81248936 81248971 -22246003 - B3 SINE B2 0 216 170 7 1204 348 24 0 0 chr15 81248971 81249012 -22245962 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1204 327 188 194 68 chr15 81249012 81249079 -22245895 - B3 SINE B2 -47 169 102 7 1204 633 225 0 18 chr15 81249375 81249488 -22245486 - B3 SINE B2 -102 114 4 7 1204 418 221 0 0 chr15 81249489 81249566 -22245408 - MTC LTR MaLR -324 97 21 7 1204 312 304 92 46 chr15 81249771 81249902 -22245072 - ID_B1 SINE B4 -1 223 87 7 1204 291 364 30 0 chr15 81249924 81250023 -22244951 - PB1D10 SINE Alu -9 108 7 7 1204 1223 48 21 0 chr15 81250122 81250267 -22244707 - B1_Mus1 SINE Alu 0 148 1 7 1204 1332 93 55 6 chr15 81250278 81250461 -22244513 - B2_Mm2 SINE B2 -3 192 1 7 1204 184 115 0 0 chr15 81250470 81250496 -22244478 - MIRc SINE MIR -124 144 119 7 1204 304 219 12 88 chr15 81250574 81250654 -22244320 - ID4 SINE ID -7 76 3 7 1204 414 198 58 0 chr15 81251064 81251150 -22243824 + ID_B1 SINE B4 133 223 -1 7 1204 217 286 51 25 chr15 81251165 81251244 -22243730 + ID SINE ID 7 87 -137 7 1204 360 256 228 62 chr15 81252439 81252601 -22242373 + ID_B1 SINE B4 1 189 -35 7 1204 501 199 173 8 chr15 81253281 81253408 -22241566 - B1_Mur2 SINE Alu 0 149 2 7 1204 291 157 0 0 chr15 81253687 81253738 -22241236 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1204 333 240 271 36 chr15 81253743 81253914 -22241060 - B4A SINE B4 -40 252 42 8 1204 473 212 59 42 chr15 81253948 81254066 -22240908 - PB1D9 SINE Alu 0 120 1 8 1204 1534 70 5 0 chr15 81254845 81255031 -22239943 - B2_Mm1t SINE B2 -6 187 1 8 1204 641 244 75 43 chr15 81255049 81255237 -22239737 - B3A SINE B2 -4 194 1 8 1204 517 260 134 70 chr15 81255506 81255692 -22239282 + B3 SINE B2 15 212 -4 8 1204 720 134 116 29 chr15 81255697 81255835 -22239139 + B1_Mur4 SINE Alu 1 150 0 8 1204 195 0 96 39 chr15 81256175 81256227 -22238747 + (GTTTG)n Simple_repeat Simple_repeat 5 59 0 8 1204 741 182 83 8 chr15 81256227 81256360 -22238614 - B1_Mur4 SINE Alu -7 143 1 8 1204 192 263 0 0 chr15 81256473 81256511 -22238463 - L2a LINE L2 -83 3343 3306 8 1204 1024 105 128 39 chr15 81256639 81256782 -22238192 + B2_Mm2 SINE B2 1 166 -29 8 1204 207 0 0 0 chr15 81256782 81256805 -22238169 + (TAA)n Simple_repeat Simple_repeat 2 24 0 8 1204 1024 105 128 39 chr15 81256805 81256840 -22238134 + B2_Mm2 SINE B2 167 194 -1 8 1204 786 235 26 97 chr15 81256845 81256883 -22238091 + B3 SINE B2 1 36 -180 8 1204 3394 39 0 5 chr15 81256883 81257270 -22237704 + L1Md_F2 LINE L1 6198 6582 0 8 1204 786 235 26 97 chr15 81257270 81257457 -22237517 + B3 SINE B2 37 210 -6 8 1204 288 280 29 39 chr15 81258234 81258338 -22236636 + PB1D10 SINE Alu 2 104 -13 8 1204 333 230 40 0 chr15 81258455 81258529 -22236445 + B3 SINE B2 1 77 -139 8 1204 563 210 64 8 chr15 81258573 81258698 -22236276 + B3 SINE B2 75 206 -10 8 1204 1191 88 0 0 chr15 81258828 81258975 -22235999 - B1_Mus1 SINE Alu -1 147 1 8 1204 423 0 0 0 chr15 81258993 81259040 -22235934 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 1204 276 77 0 0 chr15 81259040 81259079 -22235895 + (GA)n Simple_repeat Simple_repeat 2 40 0 8 1204 370 258 31 31 chr15 81259096 81259192 -22235782 - RSINE1 SINE B4 -22 143 48 8 1204 488 191 95 0 chr15 81259240 81259345 -22235629 - PB1D9 SINE Alu -5 115 1 8 1204 272 219 106 35 chr15 81259355 81259466 -22235508 - B1_Mm SINE Alu 0 147 1 8 1204 28 29 0 0 chr15 81259535 81259570 -22235404 + AT_rich Low_complexity Low_complexity 1 35 0 8 1204 773 55 32 0 chr15 81259740 81259855 -22235119 - B1_Mus2 SINE Alu -10 138 2 8 1204 24 0 0 0 chr15 81259857 81259881 -22235093 + AT_rich Low_complexity Low_complexity 1 24 0 8 1204 1346 84 50 0 chr15 81259939 81260118 -22234856 - B2_Mm2 SINE B2 -6 189 2 8 1204 21 0 0 0 chr15 81260122 81260143 -22234831 + AT_rich Low_complexity Low_complexity 1 21 0 8 1204 623 176 214 7 chr15 81260327 81260481 -22234493 + URR1A DNA MER1_type 1 186 -40 8 1204 262 200 75 52 chr15 81260922 81261046 -22233928 - ID4 SINE ID -29 123 2 8 1204 279 167 18 36 chr15 81261408 81261464 -22233510 - B1_Mur4 SINE Alu -95 55 1 8 1204 798 277 0 6 chr15 81261493 81261649 -22233325 - RSINE1 SINE B4 -10 155 1 8 1204 634 293 53 117 chr15 81262919 81263278 -22231696 - MER74B LTR ERVL -218 404 69 8 1204 345 191 46 31 chr15 81263383 81263448 -22231526 - tRNA-Ala-GCY_ tRNA tRNA -9 66 1 8 1204 797 163 82 0 chr15 81263544 81263679 -22231295 - B1_Mus1 SINE Alu 0 148 3 8 1204 1476 87 5 0 chr15 81264095 81264280 -22230694 - B2_Mm1t SINE B2 -6 187 2 8 1205 1354 82 12 0 chr15 81264745 81264916 -22230058 - B2_Mm1t SINE B2 -19 174 2 8 1205 353 22 22 0 chr15 81265018 81265064 -22229910 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 1205 383 52 17 0 chr15 81265191 81265249 -22229725 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 8 1205 1199 52 0 0 chr15 81265249 81265385 -22229589 - B1_Mm SINE Alu -10 137 2 8 1205 271 260 154 25 chr15 81265389 81265495 -22229479 - L1M4 LINE L1 -984 5162 5043 8 1205 1442 62 6 22 chr15 81265495 81265677 -22229297 - B2_Mm2 SINE B2 -15 180 2 8 1205 271 260 154 25 chr15 81265677 81265771 -22229203 - L1M4 LINE L1 -1104 5042 4936 8 1205 257 273 0 0 chr15 81265854 81265898 -22229076 - B1F1 SINE Alu -102 47 4 8 1205 421 292 35 9 chr15 81266148 81266262 -22228712 - PB1D10 SINE Alu 0 117 1 8 1205 546 284 7 7 chr15 81266395 81266530 -22228444 + B1_Mur1 SINE Alu 2 136 -13 8 1205 180 0 0 0 chr15 81266982 81267002 -22227972 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 8 1205 1395 79 62 0 chr15 81267732 81267909 -22227065 + B2_Mm2 SINE B2 1 188 -7 8 1205 1536 74 0 16 chr15 81267918 81268111 -22226863 + B2_Mm1a SINE B2 3 192 -1 8 1205 383 331 14 56 chr15 81268114 81268258 -22226716 + ID_B1 SINE B4 79 216 -8 8 1205 842 58 133 0 chr15 81268700 81268820 -22226154 + B1_Mus2 SINE Alu 12 147 0 8 1205 183 338 15 0 chr15 81268823 81268891 -22226083 - MIRc SINE MIR -30 238 170 8 1205 787 260 52 38 chr15 81269186 81269398 -22225576 - ID_B1 SINE B4 -8 216 2 8 1205 343 281 28 30 chr15 81269485 81269614 -22225360 - B1F SINE Alu -5 122 1 8 1205 329 320 79 54 chr15 81269719 81269960 -22225014 + Charlie1b DNA MER1_type 59 305 -2476 8 1205 1218 55 7 14 chr15 81270164 81270311 -22224663 + B1_Mus2 SINE Alu 1 146 -1 8 1205 264 30 0 0 chr15 81270316 81270349 -22224625 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 8 1205 947 117 80 7 chr15 81270554 81270692 -22224282 - B1_Mur3 SINE Alu 0 149 2 8 1205 1275 61 0 0 chr15 81270976 81271123 -22223851 + B1_Mus1 SINE Alu 2 148 0 8 1205 455 271 0 0 chr15 81271166 81271262 -22223712 + B1_Mur1 SINE Alu 38 133 -16 8 1205 266 222 53 40 chr15 81271196 81271271 -22223703 + ID_B1 SINE B4 146 221 -3 8 1205 1419 86 43 0 chr15 81271593 81271780 -22223194 - B2_Mm2 SINE B2 0 195 1 8 1205 982 196 74 5 chr15 81271939 81272129 -22222845 - B3 SINE B2 -13 203 1 8 1205 633 263 14 21 chr15 81272216 81272356 -22222618 + B1_Mur1 SINE Alu 9 147 -2 8 1205 552 272 24 48 chr15 81272391 81272557 -22222417 - RSINE1 SINE B4 -2 163 2 8 1205 503 253 19 132 chr15 81272561 81272766 -22222208 - B3A SINE B2 -16 182 1 8 1205 1276 117 31 21 chr15 81273192 81273384 -22221590 - B2_Mm2 SINE B2 -1 194 1 8 1205 28 29 0 0 chr15 81273491 81273526 -22221448 + AT_rich Low_complexity Low_complexity 1 35 0 8 1205 5530 92 84 153 chr15 81273572 81274044 -22220930 - Lx3_Mus LINE L1 -12 6997 6539 8 1205 230 0 0 32 chr15 81274044 81274075 -22220899 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 8 1205 934 117 55 0 chr15 81274076 81274221 -22220753 - B2_Mm2 SINE B2 -41 154 2 8 1205 5530 92 84 153 chr15 81274221 81274834 -22220140 - Lx3_Mus LINE L1 -471 6537 5851 8 1205 978 195 146 0 chr15 81274837 81275022 -22219952 + B3 SINE B2 1 212 -4 8 1205 1076 215 40 0 chr15 81275043 81275243 -22219731 - B3 SINE B2 -2 214 7 8 1205 443 186 10 0 chr15 81275243 81275340 -22219634 + CT-rich Low_complexity Low_complexity 2 99 0 8 1205 750 115 26 9 chr15 81275349 81275463 -22219511 - PB1D9 SINE Alu 0 120 5 8 1205 243 0 0 0 chr15 81275552 81275579 -22219395 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 1205 186 133 0 0 chr15 81275624 81275654 -22219320 + (A)n Simple_repeat Simple_repeat 1 30 0 8 1205 1442 97 0 5 chr15 81275741 81275927 -22219047 + B2_Mm2 SINE B2 5 189 -6 8 1205 357 215 76 0 chr15 81276029 81276108 -22218866 - L1M5 LINE L1 -3328 2818 2734 8 1205 232 139 0 0 chr15 81276409 81276445 -22218529 - U2 snRNA snRNA -152 36 1 8 1205 614 173 29 0 chr15 81276547 81276651 -22218323 + B1_Mur4 SINE Alu 2 108 -42 8 1205 855 188 7 0 chr15 81276660 81276798 -22218176 - B1_Mus2 SINE Alu -6 141 3 8 1205 303 182 0 18 chr15 81276828 81276884 -22218090 + B3 SINE B2 2 56 -160 8 1205 1709 42 0 0 chr15 81276970 81277160 -22217814 - B2_Mm1t SINE B2 -2 191 2 8 1205 549 51 25 12 chr15 81277166 81277246 -22217728 - L1_Mus2 LINE L1 0 6566 6486 8 1205 247 196 0 21 chr15 81277334 81277381 -22217593 + B1F SINE Alu 96 141 -8 8 1205 1258 68 0 0 chr15 81277392 81277539 -22217435 + B1_Mus2 SINE Alu 1 147 0 8 1205 215 146 24 0 chr15 81277539 81277580 -22217394 + A-rich Low_complexity Low_complexity 3 44 0 8 1205 506 250 58 22 chr15 81278344 81278483 -22216491 - B1F SINE Alu -5 144 1 8 1205 259 284 68 0 chr15 81278512 81278586 -22216388 + ID4_ SINE ID 5 83 0 8 1205 496 282 36 0 chr15 81279552 81279662 -22215312 - ID_B1 SINE B4 -12 212 99 8 1205 485 202 0 21 chr15 81279941 81280029 -22214945 + B4A SINE B4 9 95 -197 8 1205 1049 89 0 0 chr15 81280029 81280164 -22214810 + B1_Mus1 SINE Alu 1 135 -13 8 1205 809 218 34 34 chr15 81280191 81280367 -22214607 + B3 SINE B2 3 178 -38 8 1205 1538 58 5 0 chr15 81280550 81280740 -22214234 + B2_Mm1a SINE B2 2 192 -1 8 1205 483 291 112 9 chr15 81280740 81280919 -22214055 + RSINE1 SINE B4 13 214 -78 8 1205 795 114 18 0 chr15 81280919 81281033 -22213941 + PB1D9 SINE Alu 5 120 0 8 1205 292 315 128 33 chr15 81281033 81281110 -22213864 + B4A SINE B4 215 290 -2 8 1205 588 73 0 0 chr15 81282015 81282097 -22212877 + (TTGG)n Simple_repeat Simple_repeat 2 83 0 8 1205 739 122 26 0 chr15 81282097 81282212 -22212762 - B1_Mus2 SINE Alu -2 145 28 8 1205 273 158 0 0 chr15 81282296 81282334 -22212640 + ID_B1 SINE B4 81 118 -106 8 1205 273 212 294 0 chr15 81282297 81282382 -22212592 + PB1D10 SINE Alu 1 110 -7 8 1205 1123 165 65 0 chr15 81282430 81282630 -22212344 - B3 SINE B2 -3 213 1 8 1205 21 36 0 0 chr15 81282976 81283004 -22211970 + AT_rich Low_complexity Low_complexity 1 28 0 8 1205 426 250 0 0 chr15 81284234 81284318 -22210656 - ID_B1 SINE B4 -9 215 132 8 1205 276 30 0 0 chr15 81284367 81284400 -22210574 + (TTGG)n Simple_repeat Simple_repeat 2 34 0 9 1205 699 220 0 8 chr15 81284405 81284538 -22210436 - B1_Mus1 SINE Alu -16 132 1 9 1205 508 198 45 0 chr15 81284614 81284725 -22210249 + RMER10B LTR ERVL 232 347 -51 9 1205 403 250 33 67 chr15 81284752 81284902 -22210072 + B1F2 SINE Alu 5 149 0 9 1205 1385 59 42 16 chr15 81285144 81285334 -22209640 + B2_Mm2 SINE B2 1 195 0 9 1205 549 142 148 19 chr15 81285353 81285461 -22209513 + B1_Mus1 SINE Alu 27 148 0 9 1205 530 242 92 23 chr15 81286425 81286442 -22208532 - B4 SINE B4 -59 233 217 9 1205 468 0 0 0 chr15 81286442 81286494 -22208480 + (GTTTG)n Simple_repeat Simple_repeat 2 53 0 9 1205 530 242 92 23 chr15 81286494 81286607 -22208367 - B4 SINE B4 -76 216 94 9 1205 236 284 11 80 chr15 81286623 81286711 -22208263 - ID4_ SINE ID 0 83 2 9 1205 489 279 0 9 chr15 81286859 81286971 -22208003 + PB1D7 SINE Alu 3 113 -7 9 1205 409 220 125 29 chr15 81287106 81287242 -22207732 + B1_Mur2 SINE Alu 1 149 0 9 1205 1110 82 7 0 chr15 81287299 81287446 -22207528 + B1_Mus1 SINE Alu 1 148 0 9 1205 1269 226 78 16 chr15 81287936 81288272 -22206702 + ORR1E LTR MaLR 3 421 0 9 1205 800 61 0 88 chr15 81288426 81288551 -22206423 + B2_Mm2 SINE B2 81 194 -1 9 1205 303 261 11 74 chr15 81288596 81288691 -22206283 + PB1D10 SINE Alu 16 104 -13 9 1205 277 291 70 16 chr15 81288812 81288941 -22206033 + B3A SINE B2 63 198 0 9 1205 446 114 114 0 chr15 81288939 81289018 -22205956 + PB1D9 SINE Alu 33 120 0 9 1205 251 80 0 107 chr15 81289301 81289321 -22205653 + T-rich Low_complexity Low_complexity 31 50 0 9 1205 1270 27 0 0 chr15 81289321 81289468 -22205506 - B1_Mus2 SINE Alu 0 147 1 9 1205 251 80 0 107 chr15 81289468 81289503 -22205471 + T-rich Low_complexity Low_complexity 1 30 0 9 1205 887 62 104 37 chr15 81289579 81289714 -22205260 + B1_Mus2 SINE Alu 2 145 -2 9 1205 4114 157 77 101 chr15 81289716 81289841 -22205133 - RMER19B LTR ERVK -14 888 764 9 1205 1374 99 5 5 chr15 81289841 81290033 -22204941 + B2_Mm1t SINE B2 1 192 -1 9 1205 4114 157 77 101 chr15 81290033 81290778 -22204196 - RMER19B LTR ERVK -139 763 39 9 1205 1289 91 11 0 chr15 81290778 81290954 -22204020 + B2_Mm2 SINE B2 1 178 -17 9 1205 4114 157 77 101 chr15 81290954 81290992 -22203982 - RMER19B LTR ERVK -864 38 1 9 1205 235 95 53 13 chr15 81291003 81291078 -22203896 + T-rich Low_complexity Low_complexity 1 78 0 9 1205 1150 68 7 0 chr15 81291078 81291224 -22203750 - B1_Mus1 SINE Alu 0 148 2 9 1205 601 79 21 43 chr15 81291257 81291347 -22203627 - RMER16 LTR ERVK 0 533 446 9 1205 3398 26 5 5 chr15 81291347 81291766 -22203208 - LTRIS_Mus LTR ERV1 0 587 169 9 1205 25 0 0 0 chr15 81291797 81291822 -22203152 + AT_rich Low_complexity Low_complexity 1 25 0 9 1205 1496 69 0 5 chr15 81291848 81292038 -22202936 - B2_Mm2 SINE B2 -6 189 1 9 1205 859 235 15 20 chr15 81292060 81292260 -22202714 - B3 SINE B2 -13 203 5 9 1205 408 20 0 0 chr15 81292392 81292441 -22202533 + (TG)n Simple_repeat Simple_repeat 2 50 0 9 1205 262 175 66 66 chr15 81292441 81292502 -22202472 - RMER15 LTR ERVL -112 463 403 9 1205 1907 279 30 26 chr15 81292603 81293143 -22201831 - Lx8 LINE L1 -359 7114 6573 9 1205 252 161 214 0 chr15 81293143 81293199 -22201775 + B1_Mur2 SINE Alu 66 133 -16 9 1205 216 170 36 36 chr15 81293287 81293342 -22201632 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 9 1205 1002 33 0 0 chr15 81293344 81293466 -22201508 - B1_Mus1 SINE Alu -1 147 26 9 1205 1318 47 6 12 chr15 81293471 81293643 -22201331 - B2_Mm2 SINE B2 -24 171 1 9 1205 539 221 0 0 chr15 81293698 81293802 -22201172 + PB1D10 SINE Alu 1 104 -13 9 1205 572 130 75 11 chr15 81293803 81293896 -22201078 + B1_Mur2 SINE Alu 23 121 -28 9 1205 356 326 80 15 chr15 81294191 81294328 -22200646 + ID_B1 SINE B4 61 206 -18 9 1205 780 200 7 28 chr15 81294576 81294720 -22200254 - B3 SINE B2 -75 141 1 9 1205 218 290 203 0 chr15 81294740 81294809 -22200165 - ID SINE ID -137 87 5 9 1205 536 217 0 40 chr15 81295200 81295310 -22199664 + PB1D7 SINE Alu 1 108 -12 9 1205 288 0 0 0 chr15 81295310 81295342 -22199632 + (TAA)n Simple_repeat Simple_repeat 2 33 0 9 1205 536 217 0 40 chr15 81295342 81295356 -22199618 + PB1D7 SINE Alu 109 120 0 9 1205 903 77 15 30 chr15 81295655 81295789 -22199185 + B1_Mus1 SINE Alu 4 135 -13 9 1205 186 71 0 0 chr15 81296549 81296577 -22198397 + (CCCCG)n Simple_repeat Simple_repeat 5 32 0 9 1205 23 33 0 0 chr15 81298334 81298364 -22196610 + AT_rich Low_complexity Low_complexity 1 30 0 9 1205 640 118 34 68 chr15 81298821 81298939 -22196035 - B1_Mur4 SINE Alu 0 150 37 9 1205 388 78 0 83 chr15 81298946 81299030 -22195944 + T-rich Low_complexity Low_complexity 1 77 0 9 1205 1010 85 0 28 chr15 81299032 81299177 -22195797 - B1_Mus1 SINE Alu 0 148 8 9 1205 341 341 9 9 chr15 81299348 81299455 -22195519 + B1F1 SINE Alu 1 108 -42 9 1205 828 229 82 20 chr15 81299497 81299693 -22195281 + B3 SINE B2 3 210 -6 9 1205 949 43 0 0 chr15 81300395 81300512 -22194462 + B1_Mm SINE Alu 1 117 -30 9 1205 3159 39 18 0 chr15 81300513 81300896 -22194078 + RLTR10 LTR ERVK 1 390 0 9 1205 1253 41 0 0 chr15 81300924 81301070 -22193904 + B1_Mm SINE Alu 2 147 0 9 1205 252 143 0 0 chr15 81301093 81301149 -22193825 + (A)n Simple_repeat Simple_repeat 1 56 0 9 1205 385 210 37 0 chr15 81301176 81301257 -22193717 - PB1D9 SINE Alu -30 90 7 9 1205 287 234 0 0 chr15 81302231 81302295 -22192679 + RSINE1 SINE B4 3 66 -99 9 1205 966 129 251 0 chr15 81302458 81302629 -22192345 + B3 SINE B2 2 215 -1 9 1205 307 296 8 94 chr15 81302658 81302785 -22192189 + B3A SINE B2 12 127 -68 9 1205 381 283 23 91 chr15 81302867 81303042 -22191932 + RSINE1 SINE B4 3 165 0 9 1205 189 0 0 0 chr15 81303059 81303080 -22191894 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 9 1205 476 193 23 0 chr15 81303084 81303172 -22191802 - PB1D9 SINE Alu -22 98 9 9 1205 307 241 0 112 chr15 81303101 81303190 -22191784 - MT2B LTR ERVL -366 235 157 9 1205 779 217 14 0 chr15 81303201 81303344 -22191630 + B1_Mus2 SINE Alu 1 145 -2 9 1205 352 283 93 7 chr15 81303437 81303585 -22191389 + MIRc SINE MIR 51 207 -61 9 1205 711 234 49 14 chr15 81304480 81304623 -22190351 - B1_Mur3 SINE Alu -1 148 1 9 1205 1635 42 0 0 chr15 81304726 81304918 -22190056 + B2_Mm1a SINE B2 2 193 0 9 1205 270 296 0 36 chr15 81304950 81305034 -22189940 + ID4_ SINE ID 2 82 -1 9 1205 541 171 27 12 chr15 81305326 81305444 -22189530 + B1_Mus2 SINE Alu 1 138 -9 9 1205 277 185 74 0 chr15 81306178 81306232 -22188742 + FLAM_A SINE Alu 19 76 -219 9 1205 1021 106 35 7 chr15 81306391 81306534 -22188440 + B1_Mus1 SINE Alu 2 148 0 9 1205 324 146 272 0 chr15 81306692 81306795 -22188179 + Charlie1b DNA MER1_type 210 340 -183 9 1205 259 284 119 14 chr15 81306881 81307024 -22187950 - B4A SINE B4 -10 282 125 9 1205 364 312 104 63 chr15 81307310 81307532 -22187442 + RMER15 LTR ERVL 343 573 -2 9 1205 439 165 101 0 chr15 81307601 81307680 -22187294 - B1F SINE Alu -2 147 61 9 1205 450 246 64 0 chr15 81307939 81308049 -22186925 + ID_B1 SINE B4 108 224 0 9 1205 558 146 293 83 chr15 81308052 81308172 -22186802 + B2_Mm2 SINE B2 1 160 -35 9 1205 1359 56 62 0 chr15 81308172 81308350 -22186624 - B2_Mm2 SINE B2 -6 189 1 9 1205 558 146 293 83 chr15 81308350 81308386 -22186588 + B2_Mm2 SINE B2 161 190 -5 9 1205 1106 83 7 0 chr15 81308386 81308531 -22186443 - B1_Mus1 SINE Alu -2 146 1 9 1205 444 37 0 0 chr15 81308538 81308592 -22186382 + (GAAA)n Simple_repeat Simple_repeat 3 56 0 9 1205 369 306 81 16 chr15 81308854 81309040 -22185934 - ID_B1 SINE B4 -22 202 5 9 1205 435 207 61 0 chr15 81309135 81309217 -22185757 + B1_Mur2 SINE Alu 21 107 -42 9 1205 718 253 71 27 chr15 81309241 81309424 -22185550 + B3 SINE B2 1 191 -25 9 1205 373 81 16 16 chr15 81309471 81309534 -22185440 + (GAAAA)n Simple_repeat Simple_repeat 2 64 0 9 1205 221 179 0 0 chr15 81309540 81309579 -22185395 + B1F SINE Alu 20 58 -91 9 1205 313 284 60 60 chr15 81309544 81309660 -22185314 + ID_B1 SINE B4 105 220 -4 9 1205 24 32 0 0 chr15 81309866 81309897 -22185077 + AT_rich Low_complexity Low_complexity 1 31 0 9 1205 197 279 79 34 chr15 81309909 81309998 -22184976 - MIRc SINE MIR -147 129 35 9 1205 180 167 0 0 chr15 81310470 81310500 -22184474 + MIRb SINE MIR 36 65 -203 9 1205 549 230 15 38 chr15 81310504 81310635 -22184339 + ID_B1 SINE B4 96 223 -1 9 1205 642 148 123 15 chr15 81310682 81310812 -22184162 + B1_Mus2 SINE Alu 2 145 -2 9 1205 363 244 20 82 chr15 81310819 81310917 -22184057 + B3 SINE B2 27 118 -98 9 1205 471 113 0 0 chr15 81310941 81311012 -22183962 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 9 1205 734 110 9 0 chr15 81311012 81311121 -22183853 - B1_Mus2 SINE Alu 0 147 38 9 1205 229 194 90 77 chr15 81311055 81311133 -22183841 - RLTR25B LTR ERVK -519 509 431 9 1205 434 292 0 26 chr15 81311169 81311285 -22183689 - RSINE1 SINE B4 0 165 53 9 1205 233 206 73 110 chr15 81311280 81311362 -22183612 - MT2B2 LTR ERVL -448 136 58 9 1205 208 167 21 0 chr15 81312108 81312156 -22182818 + T-rich Low_complexity Low_complexity 1 49 0 9 1205 712 188 7 32 chr15 81312156 81312310 -22182664 - B1_Mur4 SINE Alu 0 150 1 1 1205 45 19 0 0 chr15 81312446 81312498 -22182476 + AT_rich Low_complexity Low_complexity 1 52 0 1 1205 341 333 45 0 chr15 81312707 81312818 -22182156 + PB1D10 SINE Alu 1 116 -1 1 1205 301 308 101 19 chr15 81312905 81313064 -22181910 - L1MD LINE L1 -2942 3204 3033 1 1205 865 125 7 59 chr15 81313182 81313335 -22181639 + B1_Mus2 SINE Alu 2 146 -1 1 1205 281 197 0 15 chr15 81313355 81313422 -22181552 + GA-rich Low_complexity Low_complexity 1 66 0 1 1205 198 91 0 0 chr15 81313662 81313695 -22181279 + (T)n Simple_repeat Simple_repeat 1 33 0 1 1205 1467 48 32 5 chr15 81313695 81313882 -22181092 - B2_Mm1t SINE B2 0 193 2 1 1205 1443 75 27 0 chr15 81313885 81314071 -22180903 - B2_Mm2 SINE B2 -1 194 4 1 1205 1739 153 45 112 chr15 81314074 81314449 -22180525 - ORR1B1 LTR MaLR -4 390 41 1 1205 397 232 93 23 chr15 81314456 81314628 -22180346 + RMER10A LTR ERVL 247 430 -12 1 1205 518 245 221 0 chr15 81314671 81314849 -22180125 - ID_B1 SINE B4 0 224 7 1 1205 1246 42 0 0 chr15 81314886 81315030 -22179944 - B1_Mus1 SINE Alu 0 148 5 1 1205 243 0 0 0 chr15 81315063 81315090 -22179884 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1 1205 670 210 34 20 chr15 81315140 81315286 -22179688 + B1_Mur2 SINE Alu 1 148 -1 1 1205 877 114 0 0 chr15 81315286 81315409 -22179565 + B1_Mus2 SINE Alu 25 147 0 1 1205 315 248 73 88 chr15 81315287 81315424 -22179550 + B4A SINE B4 111 245 -47 1 1205 198 103 0 0 chr15 81315434 81315463 -22179511 + (CAGG)n Simple_repeat Simple_repeat 2 30 0 1 1205 279 266 177 0 chr15 81315574 81315653 -22179321 + LTR81A LTR ERV1? 98 190 -1160 1 1205 363 288 14 7 chr15 81315816 81315956 -22179018 + GA-rich Low_complexity Low_complexity 1 141 0 1 1205 220 245 0 58 chr15 81315974 81316026 -22178948 - L2c LINE L2 -228 3159 3111 1 1205 1251 35 0 0 chr15 81316241 81316386 -22178588 - B1_Mus2 SINE Alu -2 145 1 1 1205 211 191 0 0 chr15 81316601 81316643 -22178331 + C-rich Low_complexity Low_complexity 1 42 0 1 1205 577 164 8 83 chr15 81316841 81316961 -22178013 - B1_Mur3 SINE Alu -38 111 1 1 1205 1224 187 100 45 chr15 81317440 81317745 -22177229 + RMER19B LTR ERVK 1 356 -381 1 1205 807 95 26 0 chr15 81317745 81317861 -22177113 + PB1D9 SINE Alu 2 120 0 1 1205 306 194 0 0 chr15 81317863 81317930 -22177044 + A-rich Low_complexity Low_complexity 1 67 0 1 1205 234 0 0 0 chr15 81317967 81317993 -22176981 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1205 1466 63 26 0 chr15 81318517 81318706 -22176268 - B2_Mm2 SINE B2 0 195 2 1 1205 207 0 0 0 chr15 81318816 81318839 -22176135 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1 1205 330 261 91 0 chr15 81319086 81319174 -22175800 + B3A SINE B2 103 198 0 1 1205 503 161 0 44 chr15 81319245 81319336 -22175638 + B1_Mus2 SINE Alu 42 128 -19 1 1205 23 33 0 0 chr15 81319336 81319366 -22175608 + AT_rich Low_complexity Low_complexity 1 30 0 1 1205 1193 54 0 13 chr15 81319373 81319522 -22175452 - B1_Mus1 SINE Alu 0 148 2 1 1205 646 274 48 12 chr15 81319861 81320027 -22174947 + B3A SINE B2 1 172 -26 1 1205 601 197 87 0 chr15 81320054 81320181 -22174793 + B1_Mur1 SINE Alu 2 139 -10 1 1205 295 282 64 0 chr15 81320512 81320590 -22174384 - B1F2 SINE Alu -49 100 18 1 1205 777 126 107 30 chr15 81320591 81320722 -22174252 - B1_Mur4 SINE Alu -9 141 1 1 1205 972 62 247 14 chr15 81321059 81321205 -22173769 + B2_Mm2 SINE B2 2 181 -14 1 1205 195 42 0 0 chr15 81321208 81321232 -22173742 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 1205 204 245 0 0 chr15 81321374 81321423 -22173551 + T-rich Low_complexity Low_complexity 1 49 0 1 1205 269 131 0 16 chr15 81321424 81321486 -22173488 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 1 1205 442 209 26 4 chr15 81321496 81321606 -22173368 - B1F SINE Alu -8 112 1 1 1205 202 73 49 0 chr15 81321621 81321662 -22173312 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 1205 1459 60 11 0 chr15 81321677 81321859 -22173115 - B2_Mm1t SINE B2 -9 184 1 1 1205 510 163 56 34 chr15 81321864 81321953 -22173021 - B1_Mur3 SINE Alu -1 148 58 1 1205 2450 149 56 31 chr15 81321967 81322417 -22172557 + RMER4A LTR ERVK 6 466 0 1 1205 434 129 0 67 chr15 81322417 81322476 -22172498 - B1_Mur4 SINE Alu -91 59 6 1 1205 341 233 0 88 chr15 81322410 81322490 -22172484 - B4A SINE B4 -137 155 83 1 1205 199 79 0 50 chr15 81322493 81322533 -22172441 + (TTTTC)n Simple_repeat Simple_repeat 3 40 0 1 1205 1461 200 17 10 chr15 81322538 81322836 -22172138 - Lx5 LINE L1 -5 7045 6746 1 1205 2779 42 2 152 chr15 81322840 81323295 -22171679 - RLTR10 LTR ERVK -3 387 1 1 1205 17058 27 1 30 chr15 81323297 81325341 -22169633 - RLTR10-int LTR ERVK -3 1984 1 1 1205 2858 31 2 153 chr15 81325343 81325795 -22169179 - RLTR10 LTR ERVK -2 388 5 1 1205 12806 20 0 0 chr15 81325795 81327199 -22167775 + IAPEz-int LTR ERVK 1673 3076 -3405 1 1205 2467 25 0 0 chr15 81327185 81327462 -22167512 + IAPEz-int LTR ERVK 5630 5906 -575 1 1205 1199 42 0 0 chr15 81327462 81327606 -22167368 - RLTR10 LTR ERVK -246 144 1 1 1205 1321 217 7 25 chr15 81327608 81327882 -22167092 - Lx5 LINE L1 -300 6750 6482 1 1205 3915 212 139 25 chr15 81327879 81328882 -22166092 - Lx4B LINE L1 -127 6931 5815 1 1205 2874 135 15 25 chr15 81328865 81329344 -22165630 - L1_Mur2 LINE L1 -1550 4327 3854 1 1205 288 0 0 0 chr15 81329362 81329394 -22165580 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 1205 13123 142 47 45 chr15 81330061 81330478 -22164496 - L1_Mur2 LINE L1 -2035 3842 3439 1 1205 3440 58 94 0 chr15 81330478 81330912 -22164062 + MT2C_Mm LTR ERVL 1 475 0 1 1205 13123 142 47 45 chr15 81330912 81332266 -22162708 - L1_Mur2 LINE L1 -2439 3438 2048 1 1205 198 0 0 0 chr15 81332266 81332288 -22162686 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 1205 13123 142 47 45 chr15 81332288 81332549 -22162425 - L1_Mur2 LINE L1 -3830 2047 1768 1 1205 1328 96 21 0 chr15 81332549 81332737 -22162237 + B2_Mm1t SINE B2 2 193 0 1 1205 13123 142 47 45 chr15 81332737 81332810 -22162164 - L1_Mur2 LINE L1 -4110 1767 1712 1 1205 198 0 0 0 chr15 81332810 81332832 -22162142 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 1 1205 13123 142 47 45 chr15 81332832 81332869 -22162105 - L1_Mur2 LINE L1 -4166 1711 1711 1 1205 1184 82 0 0 chr15 81332869 81333016 -22161958 - B1_Mus2 SINE Alu 0 147 1 1 1205 4140 162 83 87 chr15 81333016 81333416 -22161558 - L1_Mur2 LINE L1 -4166 1711 1295 1 1205 1207 48 7 0 chr15 81333416 81333563 -22161411 - B1_Mus1 SINE Alu 0 148 1 1 1205 4140 172 104 47 chr15 81333563 81333749 -22161225 - L1_Mur2 LINE L1 -4583 1294 1096 1 1205 1203 54 0 0 chr15 81333749 81333896 -22161078 + B1_Mus1 SINE Alu 2 148 0 1 1205 1231 199 122 19 chr15 81333896 81334077 -22160897 - L1_Mur2 LINE L1 -5991 1095 893 1 1205 393 242 50 0 chr15 81334432 81334531 -22160443 - PB1D9 SINE Alu -6 114 11 1 1205 297 303 184 11 chr15 81334685 81334875 -22160099 - ID_B1 SINE B4 -1 223 1 1 1205 581 286 97 0 chr15 81334895 81335091 -22159883 + B3 SINE B2 2 216 0 1 1205 1812 144 55 16 chr15 81335189 81335500 -22159474 + ORR1B1 LTR MaLR 1 323 -71 1 1205 30 59 0 0 chr15 81335538 81335589 -22159385 + AT_rich Low_complexity Low_complexity 1 51 0 1 1205 664 241 15 0 chr15 81335589 81335726 -22159248 - B1_Mur1 SINE Alu -8 141 3 1 1205 1106 223 0 5 chr15 81335756 81335963 -22159011 - B3 SINE B2 -10 206 1 1 1205 1243 98 49 5 chr15 81336012 81336197 -22158777 - B2_Mm2 SINE B2 0 195 3 1 1205 728 212 0 8 chr15 81336250 81336383 -22158591 + B1_Mus1 SINE Alu 5 136 -12 1 1205 1029 97 7 20 chr15 81336504 81336651 -22158323 - B1_Mm SINE Alu -1 146 2 1 1205 1297 97 32 0 chr15 81336851 81337036 -22157938 - B2_Mm2 SINE B2 -3 192 2 1 1205 8258 107 36 105 chr15 81337046 81337678 -22157296 - Lx2A1 LINE L1 -15 6993 6369 1 1205 567 98 0 79 chr15 81337678 81337767 -22157207 + B1_Mm SINE Alu 59 140 -7 1 1205 8258 107 36 105 chr15 81337767 81338300 -22156674 - Lx2A1 LINE L1 -15 6368 5840 1 1205 1057 62 0 88 chr15 81338300 81338460 -22156514 - B1_Mus2 SINE Alu 0 147 2 1 1205 8258 122 24 63 chr15 81338460 81338882 -22156092 - Lx2A1 LINE L1 -1169 5839 5418 1 1205 23 86 0 0 chr15 81338959 81339017 -22155957 + AT_rich Low_complexity Low_complexity 1 58 0 1 1205 897 76 106 0 chr15 81339022 81339043 -22155931 - B2_Mm2 SINE B2 0 195 161 1 1205 252 0 0 0 chr15 81339043 81339071 -22155903 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1 1205 897 78 106 4 chr15 81339071 81339183 -22155791 - B2_Mm2 SINE B2 -25 173 51 1 1205 234 0 0 0 chr15 81339183 81339209 -22155765 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1 1205 1230 55 0 0 chr15 81339209 81339355 -22155619 + B1_Mus2 SINE Alu 2 147 0 1 1205 511 199 80 220 chr15 81339355 81339441 -22155533 - B3A SINE B2 -136 62 3 1 1205 536 161 50 67 chr15 81339556 81339676 -22155298 + B2_Mm2 SINE B2 1 118 -77 1 1205 195 42 0 0 chr15 81339679 81339703 -22155271 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1205 336 336 50 25 chr15 81339720 81339839 -22155135 - RSINE1 SINE B4 -41 124 3 1 1205 708 286 11 64 chr15 81339853 81340040 -22154934 + B3 SINE B2 28 204 -12 1 1205 848 118 52 0 chr15 81340067 81340202 -22154772 + B1_Mus1 SINE Alu 6 147 -1 1 1205 21 36 0 0 chr15 81340281 81340309 -22154665 + AT_rich Low_complexity Low_complexity 1 28 0 1 1205 644 217 28 26 chr15 81340310 81340502 -22154472 + B3 SINE B2 1 193 -2 1 1205 1035 32 8 0 chr15 81340587 81340713 -22154261 - B1_Mm SINE Alu 0 147 21 1 1205 286 167 0 0 chr15 81340752 81340794 -22154180 - B1_Mur4 SINE Alu -108 42 1 1 1205 186 133 0 0 chr15 81340794 81340824 -22154150 + (TTA)n Simple_repeat Simple_repeat 1 30 0 1 1205 223 328 33 0 chr15 81340854 81340915 -22154059 - RSINE1 SINE B4 -11 154 92 1 1205 812 85 0 204 chr15 81340918 81341080 -22153894 + B1_Mus1 SINE Alu 5 133 -15 1 1205 447 258 58 26 chr15 81341080 81341235 -22153739 - RSINE1 SINE B4 -3 162 3 1 1205 230 236 73 0 chr15 81341552 81341607 -22153367 - ID_B1 SINE B4 -9 215 157 1 1205 805 289 5 0 chr15 81341679 81341890 -22153084 - ID_B1 SINE B4 -9 215 4 1 1205 597 148 86 36 chr15 81341894 81342034 -22152940 - B1_Mur4 SINE Alu -1 149 3 1 1205 249 338 0 36 chr15 81342038 81342121 -22152853 - PB1D10 SINE Alu -14 103 24 1 1205 1115 62 14 0 chr15 81342682 81342827 -22152147 - B1_Mus2 SINE Alu 0 147 1 1 1205 227 204 0 22 chr15 81342827 81342866 -22152108 + B3 SINE B2 19 57 -159 1 1205 36 23 0 0 chr15 81342917 81342960 -22152014 + AT_rich Low_complexity Low_complexity 1 43 0 1 1205 1415 56 39 0 chr15 81342973 81343152 -22151822 + MT2C_Mm LTR ERVL 290 475 0 1 1205 767 225 58 6 chr15 81343155 81343329 -22151645 - B3 SINE B2 -32 184 2 1 1205 1194 62 0 0 chr15 81343370 81343516 -22151458 - B1_Mus2 SINE Alu 0 147 2 1 1205 21 0 0 0 chr15 81343548 81343569 -22151405 + AT_rich Low_complexity Low_complexity 1 21 0 1 1205 405 0 0 0 chr15 81343613 81343658 -22151316 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1205 808 73 15 102 chr15 81343660 81343797 -22151177 + B1_Mus1 SINE Alu 24 148 0 1 1205 759 131 39 47 chr15 81343824 81343952 -22151022 - B1_Mur3 SINE Alu -13 136 10 1 1205 319 248 24 153 chr15 81343861 81343985 -22150989 - MT2B LTR ERVL -353 248 141 1 1205 251 226 190 121 chr15 81343968 81344084 -22150890 - B3A SINE B2 0 198 75 1 1205 310 284 101 40 chr15 81344127 81344226 -22150748 + B1_Mur4 SINE Alu 28 132 -18 1 1205 414 0 0 0 chr15 81344254 81344300 -22150674 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1205 450 260 7 66 chr15 81344308 81344444 -22150530 + ID_B1 SINE B4 90 217 -7 1 1205 728 174 71 21 chr15 81344454 81344595 -22150379 + B1_Mur3 SINE Alu 1 148 -1 1 1205 383 237 0 62 chr15 81345816 81345897 -22149077 - RSINE1 SINE B4 -80 85 10 1 1205 673 183 0 48 chr15 81345922 81346048 -22148926 - PB1D9 SINE Alu 0 120 1 1 1205 204 40 0 0 chr15 81346063 81346088 -22148886 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 1205 508 276 0 80 chr15 81346090 81346204 -22148770 - ID_B1 SINE B4 -19 205 97 1 1205 1559 122 14 214 chr15 81346204 81346525 -22148449 + RMER17C LTR ERVK 1 267 -143 1 1205 1236 48 0 0 chr15 81346525 81346672 -22148302 + B1_Mus2 SINE Alu 1 147 0 1 1205 1559 122 14 214 chr15 81346672 81346863 -22148111 + RMER17C LTR ERVK 268 410 0 1 1205 508 276 0 80 chr15 81346863 81346886 -22148088 - ID_B1 SINE B4 -128 96 79 1 1205 1064 37 59 0 chr15 81346905 81347040 -22147934 - B1_Mm SINE Alu 0 147 5 1 1205 325 241 35 35 chr15 81347040 81347148 -22147826 - PB1D10 SINE Alu -7 110 3 1 1205 426 177 25 12 chr15 81347280 81347360 -22147614 - PB1D10 SINE Alu -28 89 9 1 1205 290 294 21 21 chr15 81347360 81347374 -22147600 - ID_B1 SINE B4 -54 170 77 1 1205 233 29 0 29 chr15 81347452 81347487 -22147487 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1205 1063 87 0 0 chr15 81347487 81347625 -22147349 - B1_Mus1 SINE Alu -10 138 1 1 1205 21 57 0 0 chr15 81347627 81347662 -22147312 + AT_rich Low_complexity Low_complexity 1 35 0 1 1205 663 248 28 0 chr15 81347664 81347809 -22147165 - B1_Mur4 SINE Alu -1 149 1 1 1205 535 160 0 25 chr15 81347886 81348000 -22146974 + GA-rich Low_complexity Low_complexity 2 112 0 1 1205 1325 90 21 5 chr15 81348000 81348189 -22146785 + B2_Mm1t SINE B2 2 193 0 1 1205 302 179 266 28 chr15 81348340 81348449 -22146525 - ID_B1 SINE B4 -6 218 84 1 1205 554 138 0 31 chr15 81348353 81348450 -22146524 - B1_Mur3 SINE Alu -54 95 2 1 1205 233 381 0 0 chr15 81348841 81348904 -22146070 - ID4 SINE ID 0 83 21 1 1205 334 250 62 80 chr15 81348943 81349056 -22145918 - B1_Mur1 SINE Alu -22 127 17 1 1205 428 240 62 0 chr15 81349157 81349253 -22145721 - ID_B1 SINE B4 0 224 123 1 1205 314 314 59 0 chr15 81349717 81349819 -22145155 - ID_B1 SINE B4 -99 125 18 1 1205 319 240 168 10 chr15 81350669 81350770 -22144204 + ID_B1 SINE B4 102 218 -6 1 1205 954 106 0 0 chr15 81350822 81350963 -22144011 + (TA)n Simple_repeat Simple_repeat 2 142 0 1 1205 864 125 66 0 chr15 81350973 81351109 -22143865 - B1_Mus2 SINE Alu 0 147 3 1 1205 625 168 173 16 chr15 81351411 81351538 -22143436 + B1_Mur1 SINE Alu 1 147 -2 1 1205 1268 41 0 0 chr15 81351658 81351805 -22143169 + B1_Mus2 SINE Alu 1 147 0 1 1205 228 35 0 0 chr15 81351838 81351867 -22143107 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1205 465 328 0 8 chr15 81351904 81352030 -22142944 + RSINE1 SINE B4 37 161 -4 1 1205 721 199 0 14 chr15 81352075 81352213 -22142761 + B1_Mur4 SINE Alu 2 137 -13 1 1205 237 132 0 0 chr15 81352245 81352283 -22142691 + (GGGAGA)n Simple_repeat Simple_repeat 5 42 0 1 1205 544 234 58 7 chr15 81353062 81353200 -22141774 - B1F SINE Alu 0 149 5 1 1205 204 97 0 0 chr15 81354131 81354162 -22140812 + (CCCCCA)n Simple_repeat Simple_repeat 2 32 0 1 1205 624 254 74 34 chr15 81354761 81354936 -22140038 - B3A SINE B2 -16 182 1 1 1205 298 232 295 0 chr15 81355022 81355042 -22139932 - B4 SINE B4 -66 226 86 1 1205 412 171 0 68 chr15 81355042 81355130 -22139844 - PB1D9 SINE Alu -38 82 1 1 1205 237 333 100 10 chr15 81355286 81355386 -22139588 - PB1D10 SINE Alu -6 111 3 1 1205 253 329 14 14 chr15 81355313 81355387 -22139587 - ID_B1 SINE B4 -68 156 83 1 1205 967 217 30 10 chr15 81355459 81355659 -22139315 - B3 SINE B2 -10 206 3 1 1205 498 75 0 0 chr15 81355660 81355727 -22139247 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 1205 1582 136 83 58 chr15 81355731 81356001 -22138973 + RMER17C LTR ERVK 1 283 -127 1 1205 269 26 26 0 chr15 81356001 81356039 -22138935 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1205 1090 52 30 0 chr15 81356039 81356174 -22138800 - B1_Mus1 SINE Alu -8 140 2 1 1205 1582 136 83 58 chr15 81356174 81356300 -22138674 + RMER17C LTR ERVK 284 407 -3 1 1205 369 0 0 0 chr15 81356300 81356341 -22138633 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1205 373 323 10 0 chr15 81356349 81356448 -22138526 - ID_B1 SINE B4 -21 203 104 1 1205 336 268 0 24 chr15 81356986 81357070 -22137904 + ID4_ SINE ID 2 83 0 1 1205 362 328 29 66 chr15 81357392 81357529 -22137445 + ID_B1 SINE B4 2 133 -91 1 1205 1240 34 0 13 chr15 81357620 81357769 -22137205 + B1_Mus2 SINE Alu 1 147 0 1 1205 675 77 0 71 chr15 81357805 81357917 -22137057 + B1_Mus2 SINE Alu 43 146 -1 1 1205 435 119 0 0 chr15 81358151 81358218 -22136756 + (T)n Simple_repeat Simple_repeat 1 67 0 1 1205 1043 66 0 0 chr15 81358218 81358354 -22136620 - B1_Mm SINE Alu 0 147 12 1 1205 5816 102 33 117 chr15 81358356 81359400 -22135574 - RMER17B LTR ERVK -2 956 1 1 1205 251 240 0 0 chr15 81359580 81359630 -22135344 - RSINE1 SINE B4 -102 63 14 1 1205 533 252 28 7 chr15 81359845 81359989 -22134985 - B1F1 SINE Alu -1 148 2 1 1205 339 295 0 0 chr15 81360368 81360446 -22134528 - B1F1 SINE Alu -71 78 1 1 1205 357 246 2 2 chr15 81360710 81360799 -22134175 - ERVL-B4-int LTR ERVL -3165 1831 1743 1 1205 213 39 0 0 chr15 81360938 81360964 -22134010 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 1205 284 239 45 0 chr15 81361006 81361073 -22133901 - ID4_ SINE ID -9 74 5 1 1205 180 0 0 0 chr15 81361329 81361349 -22133625 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 1205 243 0 0 0 chr15 81361506 81361533 -22133441 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1205 1101 67 0 0 chr15 81361536 81361671 -22133303 - B1_Mm SINE Alu -12 135 1 1 1205 3974 144 98 127 chr15 81361671 81362292 -22132682 - RMER19B LTR ERVK -16 886 218 1 1205 1125 56 28 14 chr15 81362292 81362436 -22132538 + B1_Mus1 SINE Alu 1 146 -2 1 1205 3974 144 98 127 chr15 81362436 81362727 -22132247 - RMER19B LTR ERVK -685 217 1 1 1205 236 189 0 0 chr15 81362771 81362808 -22132166 - RSINE1 SINE B4 -111 54 18 1 1205 262 288 92 39 chr15 81363039 81363169 -22131805 + MT2B2 LTR ERVL 116 252 -332 1 1205 331 176 132 0 chr15 81363102 81363170 -22131804 + ID_B1 SINE B4 102 178 -46 1 1205 325 216 150 11 chr15 81363170 81363185 -22131789 + PB1D10 SINE Alu 43 112 -5 1 1205 212 59 29 0 chr15 81363200 81363234 -22131740 + (TGGGGG)n Simple_repeat Simple_repeat 2 36 0 1 1205 1061 52 0 7 chr15 81363238 81363374 -22131600 + B1_Mus1 SINE Alu 12 146 -2 1 1205 207 0 0 0 chr15 81363388 81363411 -22131563 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1 1205 476 253 95 12 chr15 81363745 81363913 -22131061 + B3A SINE B2 1 182 -16 1 1205 998 137 0 0 chr15 81363940 81364086 -22130888 + B1_Mus2 SINE Alu 2 147 0 1 1205 1045 96 14 7 chr15 81364116 81364263 -22130711 - B1_Mur4 SINE Alu 0 150 3 1 1205 24 0 0 0 chr15 81364266 81364290 -22130684 + AT_rich Low_complexity Low_complexity 1 24 0 1 1205 609 178 92 8 chr15 81364396 81364515 -22130459 - B1_Mur1 SINE Alu 0 149 21 1 1205 1752 208 110 75 chr15 81364523 81364739 -22130235 + RMER15 LTR ERVL 11 233 -342 1 1205 762 181 215 21 chr15 81364739 81364925 -22130049 + URR1A DNA MER1_type 5 226 0 1 1205 1752 208 110 75 chr15 81364925 81365254 -22129720 + RMER15 LTR ERVL 234 575 0 1 1205 422 253 84 0 chr15 81365276 81365371 -22129603 - PB1D10 SINE Alu -5 112 10 1 1205 966 65 0 80 chr15 81365417 81365567 -22129407 - B1_Mm SINE Alu -1 146 9 1 1205 409 250 69 137 chr15 81365567 81365616 -22129358 - B4 SINE B4 -67 224 40 1 1205 227 238 141 16 chr15 81365616 81365680 -22129294 + B4 SINE B4 2 73 -219 1 1205 213 39 0 0 chr15 81365750 81365776 -22129198 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 1205 538 277 40 20 chr15 81365791 81365969 -22129005 - B3A SINE B2 0 216 41 1 1205 234 0 0 0 chr15 81365976 81366002 -22128972 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1205 266 261 63 74 chr15 81366101 81366196 -22128778 - B1F1 SINE Alu -37 112 19 1 1205 410 189 14 0 chr15 81366230 81366304 -22128670 - PB1D10 SINE Alu -39 78 4 1 1205 288 0 0 0 chr15 81366387 81366419 -22128555 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1205 180 250 37 37 chr15 81366567 81366621 -22128353 - L2c LINE L2 -1 3386 3333 1 1205 282 56 0 0 chr15 81366728 81366764 -22128210 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1205 396 0 0 0 chr15 81366873 81366917 -22128057 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1205 400 219 166 37 chr15 81366976 81367118 -22127856 - B1F1 SINE Alu -3 146 2 1 1205 863 310 44 83 chr15 81367606 81367968 -22127006 - MLT2B3 LTR ERVL -44 510 163 1 1205 231 264 0 0 chr15 81368164 81368217 -22126757 - B1F1 SINE Alu -87 62 10 1 1205 1049 269 112 16 chr15 81368482 81368796 -22126178 - ORR1D2 LTR MaLR -1 369 26 1 1205 22 0 0 0 chr15 81368979 81369001 -22125973 + AT_rich Low_complexity Low_complexity 1 22 0 1 1205 807 203 0 13 chr15 81369001 81369151 -22125823 + B1_Mur4 SINE Alu 1 148 -2 1 1205 312 244 25 50 chr15 81369212 81369333 -22125641 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 1 1205 238 308 36 60 chr15 81369340 81369380 -22125594 - B3 SINE B2 -14 202 166 1 1205 198 0 0 0 chr15 81369380 81369402 -22125572 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1205 238 308 36 60 chr15 81369402 81369444 -22125530 - B3 SINE B2 -51 165 122 1 1205 2198 112 150 6 chr15 81369446 81369805 -22125169 + MTC LTR MaLR 3 413 -8 1 1205 661 171 9 0 chr15 81369902 81370013 -22124961 - B1_Mur1 SINE Alu -6 143 32 1 1205 203 119 0 45 chr15 81370030 81370074 -22124900 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 1 1205 834 143 0 15 chr15 81370526 81370661 -22124313 - B1_Mus2 SINE Alu 0 147 15 1 1205 783 305 33 21 chr15 81370648 81370889 -22124085 - RCHARR1 DNA MER1_type -728 246 3 1 1205 757 211 7 26 chr15 81370900 81371051 -22123923 + B1_Mur4 SINE Alu 2 149 -1 1 1205 588 252 73 36 chr15 81371077 81371242 -22123732 + B3A SINE B2 27 197 -1 1 1205 737 248 0 0 chr15 81371258 81371403 -22123571 + B3A SINE B2 1 145 -53 1 1205 1948 188 26 81 chr15 81371527 81371727 -22123247 + MTB_Mm LTR MaLR 1 195 -212 1 1205 1132 75 0 0 chr15 81371727 81371873 -22123101 + B1_Mus2 SINE Alu 1 146 -1 1 1205 1948 188 26 81 chr15 81371873 81372094 -22122880 + MTB_Mm LTR MaLR 196 399 -8 1 1205 369 177 0 0 chr15 81372332 81372411 -22122563 + T-rich Low_complexity Low_complexity 1 79 0 1 1205 806 73 9 0 chr15 81372411 81372520 -22122454 - B1_Mus1 SINE Alu 0 148 39 1 1205 1191 61 0 13 chr15 81372559 81372708 -22122266 + B1_Mus1 SINE Alu 2 148 0 1 1205 468 264 47 0 chr15 81372908 81373014 -22121960 + PB1D10 SINE Alu 6 116 -1 1 1205 492 256 15 60 chr15 81373081 81373214 -22121760 + B4A SINE B4 164 290 -2 1 1205 383 296 72 27 chr15 81373243 81373398 -22121576 - ORR1D2 LTR MaLR -6 413 253 1 1205 1482 196 35 32 chr15 81373420 81373736 -22121238 - ORR1D1 LTR MaLR -10 364 48 1 1205 4938 191 93 92 chr15 81373740 81374806 -22120168 - ORR1D1-int LTR MaLR 0 1370 286 1 1205 756 128 25 8 chr15 81374806 81374924 -22120050 + PB1D9 SINE Alu 1 120 0 1 1205 4938 191 93 92 chr15 81374924 81375226 -22119748 - ORR1D1-int LTR MaLR -1085 285 1 1 1205 1947 205 11 0 chr15 81375226 81375596 -22119378 - ORR1D1 LTR MaLR 0 374 1 1 1205 585 225 7 14 chr15 81375598 81375738 -22119236 - ORR1D2 LTR MaLR -231 139 1 1 1205 961 88 29 0 chr15 81376156 81376292 -22118682 + B1_Mur3 SINE Alu 10 149 0 1 1205 338 213 0 11 chr15 81376292 81376387 -22118587 + GA-rich Low_complexity Low_complexity 1 94 0 1 1205 1490 58 11 0 chr15 81376434 81376622 -22118352 + B2_Mm1a SINE B2 1 190 -3 1 1205 1092 262 110 17 chr15 81376766 81377112 -22117862 + MTE2b LTR MaLR 1 378 -1 1 1205 293 281 105 19 chr15 81377276 81377381 -22117593 - B1F2 SINE Alu -1 126 13 1 1205 271 266 125 21 chr15 81377391 81377487 -22117487 - B1F2 SINE Alu -22 127 22 1 1205 1286 34 0 0 chr15 81377522 81377669 -22117305 + B1_Mm SINE Alu 1 147 0 1 1205 23 0 0 0 chr15 81377669 81377692 -22117282 + AT_rich Low_complexity Low_complexity 1 23 0 1 1205 310 244 11 103 chr15 81377749 81377836 -22117138 - B4A SINE B4 0 292 214 1 1205 1178 35 14 14 chr15 81377853 81378000 -22116974 + B1_Mus1 SINE Alu 2 148 0 1 1205 201 111 0 53 chr15 81378057 81378095 -22116879 + (CAGA)n Simple_repeat Simple_repeat 1 36 0 1 1205 231 208 0 0 chr15 81378160 81378208 -22116766 - B4A SINE B4 -72 220 173 1 1205 1783 141 31 16 chr15 81378535 81378852 -22116122 + RMER4B LTR ERVK 17 338 -247 1 1205 578 221 6 0 chr15 81378853 81379025 -22115949 + GA-rich Low_complexity Low_complexity 3 175 0 1 1205 582 240 152 84 chr15 81379025 81379103 -22115871 + RMER4B LTR ERVK 319 407 -178 1 1205 910 85 139 0 chr15 81379103 81379232 -22115742 + B1_Mus2 SINE Alu 1 147 0 1 1205 582 240 152 84 chr15 81379232 81379403 -22115571 + RMER4B LTR ERVK 408 585 0 1 1205 536 372 13 0 chr15 81379685 81379838 -22115136 + RSINE1 SINE B4 11 165 0 1 1205 2163 267 152 88 chr15 81379921 81381163 -22113811 + RMER12 LTR ERVK 1 1322 0 1 1205 489 336 60 14 chr15 81381191 81381408 -22113566 + RMER15 LTR ERVL 336 562 -13 1 1205 357 24 0 0 chr15 81381426 81381468 -22113506 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 1 1205 671 213 0 7 chr15 81381469 81381606 -22113368 - B1_Mur1 SINE Alu -9 140 5 1 1205 335 286 0 14 chr15 81381642 81381713 -22113261 + ID_B1 SINE B4 94 163 -61 1 1205 1296 75 35 0 chr15 81381713 81381886 -22113088 + B2_Mm1t SINE B2 1 179 -14 1 1205 288 284 24 47 chr15 81381886 81381899 -22113075 + PB1D10 SINE Alu 81 95 -22 1 1205 301 171 0 22 chr15 81381972 81382037 -22112937 + B2_Mm2 SINE B2 48 109 -107 1 1205 180 0 0 0 chr15 81382052 81382072 -22112902 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1 1205 277 253 148 57 chr15 81382102 81382190 -22112784 + RSINE1 SINE B4 3 98 -67 1 1205 819 197 13 13 chr15 81382265 81382414 -22112560 + B1_Mur2 SINE Alu 1 149 0 1 1205 304 204 40 111 chr15 81382477 81382576 -22112398 + PB1D10 SINE Alu 10 101 -16 1 1205 234 214 0 0 chr15 81382926 81383010 -22111964 + T-rich Low_complexity Low_complexity 1 84 0 1 1205 1055 67 0 0 chr15 81383010 81383144 -22111830 - B1_Mus1 SINE Alu 0 148 15 1 1205 207 0 0 0 chr15 81383175 81383198 -22111776 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1 1205 1549 40 0 0 chr15 81383199 81383375 -22111599 - B2_Mm1a SINE B2 -16 177 2 1 1205 245 260 0 0 chr15 81383378 81383428 -22111546 - ID_B1 SINE B4 0 224 175 1 1205 243 217 69 42 chr15 81383379 81383444 -22111530 - PB1D10 SINE Alu 0 117 49 1 1205 1348 103 16 11 chr15 81383444 81383631 -22111343 - B2_Mm2 SINE B2 -7 188 1 1 1205 225 0 0 0 chr15 81383637 81383662 -22111312 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1 1205 1517 39 6 0 chr15 81383673 81383851 -22111123 - B2_Mm1t SINE B2 -14 179 1 1 1205 816 165 23 0 chr15 81383855 81383998 -22110976 - B1_Mur4 SINE Alu -3 147 1 1 1205 337 239 35 0 chr15 81384018 81384161 -22110813 - B3A SINE B2 -6 210 1 1 1205 216 0 0 0 chr15 81384164 81384188 -22110786 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1205 386 252 8 108 chr15 81384188 81384308 -22110666 + ID_B1 SINE B4 117 224 0 1 1205 251 79 0 0 chr15 81384426 81384464 -22110510 - B1_Mm SINE Alu 0 147 110 1 1205 23 0 0 0 chr15 81384470 81384493 -22110481 + AT_rich Low_complexity Low_complexity 1 23 0 1 1205 1048 84 21 0 chr15 81384493 81384636 -22110338 - B1_Mus2 SINE Alu 0 147 2 1 1205 241 338 13 0 chr15 81384678 81384755 -22110219 + PB1D7 SINE Alu 24 101 -19 1 1205 587 217 20 34 chr15 81384772 81384789 -22110185 + ID_B1 SINE B4 79 224 0 1 1205 1051 38 15 0 chr15 81384789 81384920 -22110054 + B1_Mus1 SINE Alu 16 148 0 1 1205 673 120 134 17 chr15 81385683 81385802 -22109172 - B1_Mm SINE Alu -13 134 2 1 1205 424 256 80 9 chr15 81385928 81386050 -22108924 + PB1D10 SINE Alu 1 128 -21 1 1205 234 247 52 0 chr15 81386086 81386100 -22108874 + PB1D9 SINE Alu 40 120 0 1 1205 303 210 0 16 chr15 81386100 81386163 -22108811 + ID_B1 SINE B4 163 224 0 1 1205 830 160 35 0 chr15 81386166 81386310 -22108664 + B1_Mur3 SINE Alu 1 149 0 1 1205 233 180 0 53 chr15 81386310 81386404 -22108570 + A-rich Low_complexity Low_complexity 1 89 0 1 1205 614 245 141 15 chr15 81386516 81386715 -22108259 - ID_B1 SINE B4 0 224 1 1 1205 247 367 46 29 chr15 81386736 81386910 -22108064 - MIRb SINE MIR -27 241 65 1 1205 706 180 0 0 chr15 81387288 81387399 -22107575 + B1_Mus2 SINE Alu 28 138 -9 1 1205 1037 70 7 47 chr15 81387459 81387608 -22107366 + B1_Mus2 SINE Alu 2 144 -3 1 1205 208 0 30 30 chr15 81387608 81387641 -22107333 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 1205 283 267 67 29 chr15 81387647 81387751 -22107223 - L1MB5 LINE L1 -164 6010 5903 1 1205 493 245 0 9 chr15 81387808 81387915 -22107059 - ID_B1 SINE B4 -9 215 110 1 1205 377 271 51 29 chr15 81387915 81387945 -22107029 - B1F1 SINE Alu -9 140 1 1 1205 227 296 25 27 chr15 81387959 81388050 -22106924 - PB1D10 SINE Alu -29 88 1 1 1205 345 24 0 0 chr15 81388075 81388117 -22106857 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1205 302 210 84 24 chr15 81388129 81388212 -22106762 - L1M5 LINE L1 -563 5561 5474 1 1205 526 265 127 17 chr15 81388217 81388390 -22106584 - B3A SINE B2 -6 192 1 1 1205 688 187 14 21 chr15 81388410 81388552 -22106422 - B1_Mur1 SINE Alu -1 148 8 1 1205 798 245 26 5 chr15 81388569 81388762 -22106212 - B3 SINE B2 -5 211 15 1 1205 481 270 87 0 chr15 81388870 81388996 -22105978 - ID_B1 SINE B4 -8 216 80 1 1205 318 26 0 0 chr15 81389015 81389054 -22105920 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1205 263 221 100 38 chr15 81389086 81389166 -22105808 - B4A SINE B4 -21 271 187 1 1205 242 116 0 0 chr15 81389191 81389234 -22105740 + URR1B DNA MER1_type 111 153 -72 1 1205 1133 62 7 0 chr15 81389237 81389382 -22105592 + B1_Mm SINE Alu 2 147 0 1 1205 496 157 0 0 chr15 81389407 81389496 -22105478 + URR1B DNA MER1_type 136 224 -1 1 1205 448 303 56 22 chr15 81389500 81389679 -22105295 - B4A SINE B4 -100 192 8 1 1205 320 291 8 68 chr15 81389692 81389810 -22105164 - B1F SINE Alu -2 147 37 1 1205 369 0 0 0 chr15 81389825 81389866 -22105108 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1205 287 274 48 10 chr15 81390064 81390167 -22104807 - PB1D10 SINE Alu 0 117 11 1 1205 180 0 0 0 chr15 81390338 81390358 -22104616 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1 1205 634 215 0 0 chr15 81390358 81390488 -22104486 - B1_Mm SINE Alu -13 134 5 1 1205 1444 68 16 5 chr15 81390524 81390716 -22104258 - B2_Mm2 SINE B2 0 195 2 1 1205 449 276 10 0 chr15 81390716 81390814 -22104160 - PB1D7 SINE Alu -11 109 11 1 1205 492 257 28 56 chr15 81390866 81391010 -22103964 + B1_Mur3 SINE Alu 1 140 -9 1 1205 1117 37 0 0 chr15 81391080 81391214 -22103760 + B1_Mus2 SINE Alu 1 134 -13 1 1205 183 42 0 0 chr15 81391214 81391238 -22103736 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 1205 729 0 0 0 chr15 81391288 81391369 -22103605 + (TTTC)n Simple_repeat Simple_repeat 2 82 0 1 1205 1258 34 0 7 chr15 81391371 81391519 -22103455 - B1_Mus2 SINE Alu 0 147 1 1 1205 290 242 37 92 chr15 81391660 81391769 -22103205 + MT2B LTR ERVL 155 257 -344 1 1205 692 167 31 8 chr15 81391678 81391805 -22103169 + B1_Mur4 SINE Alu 12 141 -9 1 1205 234 62 0 0 chr15 81392043 81392075 -22102899 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 1205 212 273 61 0 chr15 81392479 81392545 -22102429 + B1F SINE Alu 6 75 -74 1 1205 971 190 52 0 chr15 81392637 81392848 -22102126 - MTD LTR MaLR -2 417 196 1 1205 695 214 0 0 chr15 81392889 81393029 -22101945 - B1_Mus2 SINE Alu 0 147 8 1 1205 536 217 115 44 chr15 81393040 81393223 -22101751 - MTD LTR MaLR -217 204 9 1 1205 306 242 162 29 chr15 81393517 81393653 -22101321 + HAL1-3A_ME LINE L1 2284 2437 -421 1 1205 223 203 14 14 chr15 81393920 81393990 -22100984 + CT-rich Low_complexity Low_complexity 3 72 0 1 1205 429 224 9 70 chr15 81393997 81394112 -22100862 - B1_Mur2 SINE Alu -19 130 23 1 1205 381 223 7 110 chr15 81394244 81394380 -22100594 + MT2B LTR ERVL 160 281 -320 1 1205 692 132 0 150 chr15 81394262 81394398 -22100576 + B1_Mur3 SINE Alu 13 125 -24 1 1205 492 18 0 0 chr15 81394398 81394455 -22100519 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1205 692 132 0 150 chr15 81394455 81394478 -22100496 + B1_Mur3 SINE Alu 126 148 -1 1 1205 623 344 38 4 chr15 81394812 81395075 -22099899 + B4A SINE B4 3 274 -18 1 1205 605 167 142 0 chr15 81395289 81395409 -22099565 + B1_Mus2 SINE Alu 9 145 -2 1 1205 700 211 42 0 chr15 81395510 81395652 -22099322 - B1_Mur1 SINE Alu -1 148 1 1 150 583 216 52 0 chr15 81395663 81395797 -22099177 - B1_Mur3 SINE Alu -3 146 6 1 1206 1066 105 7 0 chr15 81396568 81396711 -22098263 - B1_Mus2 SINE Alu -2 145 2 1 1206 702 161 64 28 chr15 81396720 81396861 -22098113 - B1_Mur1 SINE Alu -1 148 3 1 1206 790 176 13 13 chr15 81396874 81397024 -22097950 - B1_Mur4 SINE Alu 0 150 1 1 1206 625 240 70 29 chr15 81397058 81397083 -22097891 + B3 SINE B2 1 24 -192 1 1206 1683 180 27 96 chr15 81397083 81397488 -22097486 - ORR1C1 LTR MaLR 0 378 2 1 1206 625 240 70 29 chr15 81397488 81397634 -22097340 + B3 SINE B2 25 179 -37 1 1206 207 262 24 24 chr15 81397637 81397719 -22097255 + (CATATA)n Simple_repeat Simple_repeat 4 85 0 1 1206 331 298 59 48 chr15 81397745 81397932 -22097042 - B3A SINE B2 -7 191 3 1 1206 264 280 217 43 chr15 81397972 81398110 -22096864 - RSINE1 SINE B4 -1 164 3 1 1206 443 150 118 20 chr15 81398131 81398233 -22096741 - ORR1C1 LTR MaLR -266 112 1 1 1206 21 0 0 0 chr15 81398261 81398282 -22096692 + AT_rich Low_complexity Low_complexity 1 21 0 1 1206 599 165 20 0 chr15 81398284 81398403 -22096571 + B1_Mur3 SINE Alu 21 143 -6 1 1206 235 241 43 151 chr15 81398493 81398586 -22096388 - RSINE1 SINE B4 -43 122 40 1 1206 419 184 11 32 chr15 81398625 81398818 -22096156 + CT-rich Low_complexity Low_complexity 1 188 0 1 1206 789 118 32 83 chr15 81398825 81398982 -22095992 - B1_Mur4 SINE Alu 0 150 2 1 1206 198 0 0 0 chr15 81399012 81399034 -22095940 + (C)n Simple_repeat Simple_repeat 1 22 0 1 1206 594 193 14 43 chr15 81399034 81399175 -22095799 - B1F SINE Alu -12 137 1 1 1206 249 57 0 0 chr15 81399356 81399391 -22095583 + (TCTG)n Simple_repeat Simple_repeat 1 35 0 1 1206 851 153 15 0 chr15 81399598 81399735 -22095239 + B1_Mus1 SINE Alu 1 139 -9 1 1206 847 239 28 19 chr15 81399793 81400006 -22094968 - B3 SINE B2 0 216 2 1 1206 314 316 0 0 chr15 81400033 81400112 -22094862 - ID4_ SINE ID 0 83 5 1 1206 380 262 19 90 chr15 81400197 81400352 -22094622 + B4A SINE B4 128 271 -21 1 1206 299 26 0 0 chr15 81400416 81400454 -22094520 + tRNA-Val-GTG tRNA tRNA 1 38 -38 1 1206 456 188 82 11 chr15 81400726 81400909 -22094065 + RMER17C LTR ERVK 80 275 -135 1 1206 486 0 0 0 chr15 81400911 81400965 -22094009 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 1206 609 14 0 0 chr15 81400965 81401035 -22093939 + (GGAA)n Simple_repeat Simple_repeat 4 73 0 1 1206 275 286 116 0 chr15 81401090 81401202 -22093772 + RMER15 LTR ERVL 393 517 -58 1 1206 252 0 0 0 chr15 81401261 81401289 -22093685 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1206 785 135 75 0 chr15 81401356 81401489 -22093485 - B1_Mus1 SINE Alu 0 148 6 1 1206 755 302 5 20 chr15 81401504 81401700 -22093274 - B3 SINE B2 -3 213 21 1 1206 195 42 0 0 chr15 81401898 81401922 -22093052 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 1206 432 57 14 0 chr15 81401937 81402002 -22092972 - B2_Mm2 SINE B2 -82 116 46 1 1206 1205 89 0 0 chr15 81402018 81402186 -22092788 - B2_Mm2 SINE B2 -26 169 2 1 1206 1010 91 0 0 chr15 81402233 81402376 -22092598 + B1_Mus1 SINE Alu 6 148 0 1 1206 433 290 38 15 chr15 81402443 81402576 -22092398 + B1_Mur1 SINE Alu 13 148 -1 1 1206 421 283 30 0 chr15 81402657 81402756 -22092218 - B1_Mur1 SINE Alu -35 114 13 1 1206 593 101 2 19 chr15 81402756 81402853 -22092121 + B1_Mus1 SINE Alu 1 86 -228 1 1206 801 0 0 0 chr15 81402872 81402961 -22092013 + (TTTC)n Simple_repeat Simple_repeat 1 89 0 1 1206 1060 62 0 0 chr15 81402961 81403091 -22091883 - B1_Mus1 SINE Alu -17 131 2 1 1206 819 187 0 0 chr15 81403151 81403285 -22091689 + B1_Mus1 SINE Alu 2 135 -13 1 1206 260 53 26 0 chr15 81403285 81403323 -22091651 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 1 1206 293 210 71 47 chr15 81403404 81403489 -22091485 + ID_B1 SINE B4 100 186 -38 1 1206 604 210 8 0 chr15 81403513 81403637 -22091337 + B1_Mur2 SINE Alu 1 125 -24 1 1206 550 246 40 47 chr15 81403802 81403951 -22091023 + B1_Mur3 SINE Alu 2 149 0 1 1206 350 103 38 13 chr15 81403952 81404031 -22090943 + GA-rich Low_complexity Low_complexity 2 82 0 1 1206 1105 77 0 14 chr15 81404095 81404240 -22090734 + B1_Mus1 SINE Alu 5 147 -1 1 1206 221 0 0 33 chr15 81404242 81404272 -22090702 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1206 649 209 132 122 chr15 81404755 81404968 -22090006 - B3 SINE B2 0 216 2 1 1206 216 211 155 0 chr15 81405096 81405129 -22089845 - B3A SINE B2 -113 85 49 1 1206 680 31 0 10 chr15 81405129 81405226 -22089748 - L1Md_F2 LINE L1 0 6582 6487 1 1206 216 211 155 0 chr15 81405226 81405263 -22089711 - B3A SINE B2 -150 48 5 1 1206 400 331 23 0 chr15 81405402 81405532 -22089442 - B1F1 SINE Alu -14 135 3 1 1206 393 230 167 9 chr15 81405595 81405709 -22089265 + B1_Mur1 SINE Alu 10 141 -8 1 1206 388 225 26 43 chr15 81405724 81405840 -22089134 + B3A SINE B2 1 114 -84 1 1206 1410 49 0 0 chr15 81405830 81406015 -22088959 + MT2_Mm LTR ERVL 309 493 0 1 1206 579 27 0 0 chr15 81406023 81406096 -22088878 + B1_Mus2 SINE Alu 62 134 -13 1 1206 360 0 0 0 chr15 81406096 81406136 -22088838 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 1 1206 29 60 0 0 chr15 81406428 81406478 -22088496 + AT_rich Low_complexity Low_complexity 1 50 0 1 1206 992 134 0 7 chr15 81406486 81406636 -22088338 - B1_Mur4 SINE Alu 0 150 2 1 1206 261 200 34 145 chr15 81406641 81406758 -22088216 - B3A SINE B2 -2 196 93 1 1206 574 223 57 7 chr15 81407195 81407335 -22087639 - B1_Mus1 SINE Alu -1 147 1 1 1206 252 0 0 0 chr15 81407346 81407374 -22087600 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1 1206 393 39 0 0 chr15 81407903 81407954 -22087020 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1206 693 192 340 122 chr15 81407982 81408326 -22086648 + MTD LTR MaLR 1 419 0 1 1206 675 287 64 53 chr15 81408333 81408616 -22086358 - B4A SINE B4 -4 288 3 1 1206 29 0 0 0 chr15 81408625 81408654 -22086320 + AT_rich Low_complexity Low_complexity 1 29 0 1 1206 496 81 321 9 chr15 81408660 81408772 -22086202 - B2_Mm2 SINE B2 -2 193 47 1 1206 1281 97 23 0 chr15 81408785 81408961 -22086013 - B2_Mm2 SINE B2 -14 181 2 1 1206 828 87 0 0 chr15 81408977 81409104 -22085870 + (TTTA)n Simple_repeat Simple_repeat 2 128 0 1 1206 590 215 38 39 chr15 81409104 81409261 -22085713 - B1_Mur1 SINE Alu -10 139 6 1 1206 701 79 0 10 chr15 81409261 81409363 -22085611 + (TTTC)n Simple_repeat Simple_repeat 2 102 0 1 1206 1090 80 0 0 chr15 81409363 81409500 -22085474 - B1_Mus2 SINE Alu -10 137 1 1 1206 1223 81 6 0 chr15 81409506 81409679 -22085295 + (TTTC)n Simple_repeat Simple_repeat 4 177 0 1 1206 622 156 8 8 chr15 81409684 81409779 -22085195 + polypyrimidine Low_complexity Low_complexity 35 130 0 1 1206 1279 67 6 6 chr15 81409779 81409959 -22085015 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1206 622 156 8 8 chr15 81409959 81409981 -22084993 + polypyrimidine Low_complexity Low_complexity 13 34 0 1 1206 201 74 0 0 chr15 81409990 81410017 -22084957 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1206 521 225 72 7 chr15 81410017 81410146 -22084828 - B1_Mus1 SINE Alu -9 139 1 1 1206 789 224 9 89 chr15 81410164 81410389 -22084585 - B3 SINE B2 -9 207 1 1 1206 697 189 14 7 chr15 81410483 81410622 -22084352 - B1_Mur3 SINE Alu 0 149 10 1 1206 261 261 15 44 chr15 81410568 81410636 -22084338 - B4A SINE B4 -143 149 84 1 1206 448 184 200 0 chr15 81410644 81410769 -22084205 - B1_Mur4 SINE Alu 0 150 1 1 1206 228 290 53 53 chr15 81410780 81410893 -22084081 - PB1D9 SINE Alu -7 113 1 1 1206 747 191 8 0 chr15 81411141 81411272 -22083702 + B1_Mur4 SINE Alu 1 132 -18 1 1206 812 145 0 38 chr15 81411288 81411432 -22083542 + GA-rich Low_complexity Low_complexity 2 141 0 1 1206 1188 55 7 0 chr15 81411432 81411578 -22083396 + B1_Mus2 SINE Alu 1 147 0 1 1206 812 145 0 38 chr15 81411578 81411619 -22083355 + polypurine Low_complexity Low_complexity 142 180 0 1 1206 632 282 21 68 chr15 81411997 81412233 -22082741 - B4A SINE B4 -63 229 5 1 1206 237 236 139 0 chr15 81412637 81412709 -22082265 - ID2 SINE ID 0 83 2 1 1206 566 256 16 0 chr15 81412732 81412861 -22082113 - B1_Mur3 SINE Alu -18 131 1 1 1206 471 236 73 73 chr15 81412934 81413019 -22081955 - B3 SINE B2 -22 194 106 1 1206 1225 92 16 32 chr15 81413019 81413209 -22081765 + B2_Mm2 SINE B2 2 188 -7 1 1206 471 241 64 68 chr15 81413209 81413283 -22081691 - B3 SINE B2 -111 105 36 1 1206 452 168 56 65 chr15 81413309 81413417 -22081557 - B1_Mur2 SINE Alu -5 144 38 1 1206 474 271 30 15 chr15 81413490 81413621 -22081353 - ID_B1 SINE B4 -90 134 2 1 1206 1012 100 57 0 chr15 81413642 81413782 -22081192 - B1_Mus1 SINE Alu 0 148 1 1 1206 358 330 0 0 chr15 81413823 81413923 -22081051 + PB1D10 SINE Alu 9 108 -9 1 1206 558 194 123 8 chr15 81414171 81414301 -22080673 - B1_Mur4 SINE Alu 0 150 6 1 1206 320 361 31 43 chr15 81414415 81414577 -22080397 + RSINE1 SINE B4 6 165 0 1 1206 229 290 0 0 chr15 81415679 81415741 -22079233 + C-rich Low_complexity Low_complexity 1 62 0 1 1206 234 246 0 17 chr15 81415847 81415905 -22079069 + G-rich Low_complexity Low_complexity 4 60 0 1 1206 330 26 0 0 chr15 81418192 81418231 -22076743 + (GAA)n Simple_repeat Simple_repeat 1 39 0 1 1206 349 266 52 4 chr15 81418930 81419049 -22075925 - PB1D9 SINE Alu -23 126 5 1 1206 23 33 0 0 chr15 81419158 81419188 -22075786 + AT_rich Low_complexity Low_complexity 1 30 0 1 1206 609 217 41 14 chr15 81419200 81419345 -22075629 - B1_Mur2 SINE Alu 0 149 1 1 1206 473 224 0 49 chr15 81419372 81419494 -22075480 - PB1D9 SINE Alu 0 120 5 1 1206 1234 41 7 0 chr15 81419680 81419827 -22075147 + B1_Mus1 SINE Alu 1 148 0 1 1206 318 165 215 0 chr15 81419893 81419972 -22075002 - B1_Mus2 SINE Alu -29 118 23 1 1206 555 291 69 35 chr15 81420087 81420290 -22074684 - B3 SINE B2 -3 213 4 1 1206 673 193 21 69 chr15 81420493 81420638 -22074336 - B1_Mur3 SINE Alu -7 142 5 1 1206 218 216 307 0 chr15 81420848 81420936 -22074038 - B1_Mur2 SINE Alu 0 149 35 1 1206 24 0 0 0 chr15 81421002 81421026 -22073948 + AT_rich Low_complexity Low_complexity 1 24 0 1 1206 352 317 16 24 chr15 81422320 81422443 -22072531 - PB1 SINE Alu -2 125 4 1 1206 437 235 0 0 chr15 81422522 81422607 -22072367 + U6 snRNA snRNA 1 85 -22 1 1206 319 308 0 64 chr15 81422608 81422733 -22072241 + PB1D10 SINE Alu 1 117 0 1 1206 296 305 43 74 chr15 81422869 81423032 -22071942 + RSINE1 SINE B4 2 159 -6 1 1206 639 243 141 11 chr15 81423105 81423296 -22071678 - B3 SINE B2 0 216 1 1 1206 352 217 11 46 chr15 81423370 81423457 -22071517 + B1_Mur1 SINE Alu 66 149 0 1 1206 197 213 100 62 chr15 81423476 81423556 -22071418 + MIR SINE MIR 1 83 -179 1 1206 188 253 39 39 chr15 81423580 81423658 -22071316 + MIRc SINE MIR 157 234 -34 1 1206 468 223 126 0 chr15 81424276 81424379 -22070595 - B3 SINE B2 -96 120 5 1 1206 246 162 217 14 chr15 81424386 81424455 -22070519 - B1F1 SINE Alu 0 149 67 1 1206 1095 56 42 0 chr15 81424481 81424623 -22070351 - B1_Mus1 SINE Alu 0 148 1 1 1206 504 177 8 66 chr15 81424698 81424819 -22070155 - B1_Mur4 SINE Alu 0 150 37 1 1206 233 295 76 13 chr15 81424934 81425013 -22069961 - B1F SINE Alu -56 93 10 1 1206 860 257 57 43 chr15 81425105 81425386 -22069588 - B4A SINE B4 0 292 8 1 1206 764 146 8 0 chr15 81426567 81426690 -22068284 + B1_Mur4 SINE Alu 2 125 -25 1 1206 329 187 223 32 chr15 81427085 81427179 -22067795 - B1_Mur4 SINE Alu -37 113 2 1 1206 292 268 60 35 chr15 81427216 81427332 -22067642 - RSINE1 SINE B4 -35 130 12 1 1206 681 243 21 42 chr15 81427514 81427707 -22067267 - B3A SINE B2 -8 190 2 1 1206 289 297 11 32 chr15 81427758 81427852 -22067122 - B3A SINE B2 -105 93 2 1 1206 207 0 0 0 chr15 81427862 81427885 -22067089 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1 1206 398 286 0 11 chr15 81427891 81427983 -22066991 - B1_Mur1 SINE Alu -17 132 42 1 1206 585 254 133 0 chr15 81427985 81428166 -22066808 - B3 SINE B2 -1 215 11 1 1206 551 175 48 0 chr15 81428175 81428278 -22066696 - PB1D9 SINE Alu 0 120 13 1 1206 289 228 36 90 chr15 81428499 81428610 -22066364 - RSINE1 SINE B4 -49 116 12 1 1206 213 39 0 0 chr15 81428911 81428937 -22066037 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1 1206 1134 62 6 0 chr15 81428937 81429098 -22065876 - B2_Mm1t SINE B2 -30 163 2 1 1206 399 291 113 0 chr15 81429142 81429283 -22065691 - B3A SINE B2 -1 197 41 1 1206 333 0 0 0 chr15 81429399 81429436 -22065538 + (T)n Simple_repeat Simple_repeat 1 37 0 1 1206 1179 41 0 13 chr15 81429436 81429585 -22065389 - B1_Mus2 SINE Alu 0 147 1 1 1206 321 250 42 0 chr15 81429687 81429759 -22065215 - ID_B1 SINE B4 -54 170 96 1 1206 211 188 337 12 chr15 81430116 81430202 -22064772 - PB1D7 SINE Alu 0 120 7 1 1206 213 316 0 0 chr15 81430152 81430209 -22064765 - ID_B1 SINE B4 -87 137 81 1 1206 457 314 6 82 chr15 81430243 81430413 -22064561 + B3A SINE B2 7 163 -35 1 1206 472 289 31 0 chr15 81430484 81430612 -22064362 - RSINE1 SINE B4 -31 134 3 1 1206 288 181 0 0 chr15 81430731 81430814 -22064160 + T-rich Low_complexity Low_complexity 1 83 0 1 1206 1210 41 7 7 chr15 81430815 81430962 -22064012 - B1_Mm SINE Alu 0 147 1 1 1206 849 153 7 40 chr15 81430962 81431111 -22063863 - B1_Mm SINE Alu -2 145 1 1 1206 1527 253 150 45 chr15 81432362 81432982 -22061992 - Lx8 LINE L1 -598 6875 6191 1 1206 347 219 27 0 chr15 81432992 81433065 -22061909 + PB1D9 SINE Alu 9 83 -37 1 1206 341 262 53 76 chr15 81433352 81433484 -22061490 - RSINE1 SINE B4 -36 129 1 1 1206 1233 109 44 0 chr15 81433492 81433675 -22061299 - B2_Mm2 SINE B2 -3 192 2 1 1206 465 238 197 2 chr15 81433849 81434134 -22060840 - Lx8 LINE L1 -1661 5983 5625 1 1206 633 135 80 9 chr15 81434234 81434346 -22060628 + PB1D9 SINE Alu 1 120 0 1 1206 267 252 8 127 chr15 81434375 81434493 -22060481 - B3A SINE B2 -14 184 81 1 1206 229 242 78 31 chr15 81434542 81434606 -22060368 - L2a LINE L2 -65 3361 3295 1 1206 797 183 0 14 chr15 81434635 81434779 -22060195 - B1_Mur3 SINE Alu 0 149 8 1 1206 637 217 35 28 chr15 81434800 81434942 -22060032 + B1_Mur2 SINE Alu 1 143 -6 1 1206 228 286 0 79 chr15 81434980 81435056 -22059918 + tRNA-Ala-GCY_ tRNA tRNA 3 72 -3 1 1206 547 278 104 20 chr15 81435191 81435393 -22059581 - ID_B1 SINE B4 -2 222 4 1 1206 252 315 53 44 chr15 81435438 81435551 -22059423 + B3A SINE B2 6 119 -79 1 1206 248 268 10 147 chr15 81435612 81435711 -22059263 - PB1D10 SINE Alu -1 126 23 1 1206 503 276 86 30 chr15 81435727 81435925 -22059049 - B3 SINE B2 -6 210 2 1 1206 2231 180 75 57 chr15 81436098 81436645 -22058329 - RMER15 LTR ERVL 0 575 19 1 1206 21 36 0 0 chr15 81437109 81437137 -22057837 + AT_rich Low_complexity Low_complexity 1 28 0 1 1206 532 250 86 35 chr15 81437156 81437330 -22057644 + B3 SINE B2 15 197 -19 1 1206 338 290 40 0 chr15 81437339 81437439 -22057535 + PB1D10 SINE Alu 7 110 -7 1 1206 332 279 121 16 chr15 81437633 81437757 -22057217 + B4A SINE B4 1 137 -155 1 1206 1129 64 0 0 chr15 81438172 81438312 -22056662 - B1_Mm SINE Alu -7 140 1 1 1206 216 0 0 0 chr15 81438491 81438515 -22056459 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1206 330 127 8 0 chr15 81438873 81438951 -22056023 - B1_Mus2 SINE Alu 0 147 41 1 1206 288 287 93 31 chr15 81439003 81439100 -22055874 - RSINE1 SINE B4 -10 155 53 1 1206 292 191 88 22 chr15 81439586 81439677 -22055297 + B1_Mur1 SINE Alu 53 149 0 1 1206 337 299 174 18 chr15 81440074 81440241 -22054733 - B3A SINE B2 -5 193 1 1 1206 237 286 83 0 chr15 81440247 81440331 -22054643 - ID_B1 SINE B4 -6 218 128 1 1206 1229 60 12 0 chr15 81440414 81440581 -22054393 - B2_Mm2 SINE B2 -26 169 1 1 1206 230 333 15 0 chr15 81441238 81441304 -22053670 - ID4_ SINE ID -16 67 1 1 1206 305 215 15 0 chr15 81441412 81441477 -22053497 - B4A SINE B4 -216 76 11 1 1206 769 130 104 0 chr15 81442142 81442296 -22052678 + B2_Mm2 SINE B2 24 193 -2 1 1206 393 240 20 50 chr15 81442354 81442455 -22052519 - PB1D10 SINE Alu -5 112 15 1 1206 23 33 0 0 chr15 81442508 81442538 -22052436 + AT_rich Low_complexity Low_complexity 1 30 0 1 1206 1040 133 42 18 chr15 81442663 81442831 -22052143 - B2_Mm1t SINE B2 -19 174 3 1 1206 448 267 13 58 chr15 81442898 81443053 -22051921 - B1_Mur4 SINE Alu -1 149 2 1 1206 333 174 0 0 chr15 81443065 81443134 -22051840 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 1206 29 0 0 0 chr15 81443151 81443180 -22051794 + AT_rich Low_complexity Low_complexity 1 29 0 1 1206 472 208 167 0 chr15 81443294 81443414 -22051560 + B1_Mus2 SINE Alu 8 147 0 1 1206 224 306 0 14 chr15 81443915 81443988 -22050986 + CT-rich Low_complexity Low_complexity 3 74 0 1 1206 453 184 289 0 chr15 81444223 81444337 -22050637 - B1_Mm SINE Alu 0 147 1 1 1206 200 233 0 0 chr15 81444421 81444464 -22050510 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1206 400 207 192 39 chr15 81444508 81444664 -22050310 - B3 SINE B2 -11 205 26 1 1206 671 160 249 23 chr15 81444729 81444902 -22050072 - B3 SINE B2 -4 212 1 1 1206 291 356 65 40 chr15 81445032 81445231 -22049743 - B4A SINE B4 -60 232 29 1 1206 189 139 0 0 chr15 81445253 81445296 -22049678 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 1 1206 207 0 0 0 chr15 81445320 81445343 -22049631 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1206 1051 90 14 0 chr15 81445345 81445490 -22049484 - B1_Mus1 SINE Alu -1 147 1 1 1206 456 281 130 0 chr15 81445514 81445699 -22049275 - B3 SINE B2 -4 212 4 1 1206 648 194 17 32 chr15 81445710 81445856 -22049118 - B1_Mus1 SINE Alu -1 148 5 1 1206 255 152 0 0 chr15 81445946 81445992 -22048982 + T-rich Low_complexity Low_complexity 1 46 0 1 1206 1031 116 7 0 chr15 81446004 81446150 -22048824 - B1_Mm SINE Alu 0 147 1 1 1206 297 389 88 6 chr15 81446171 81446352 -22048622 - B4A SINE B4 -96 196 1 1 1206 251 216 0 0 chr15 81446791 81446842 -22048132 + Lx8 LINE L1 7419 7469 -4 1 1206 1182 75 0 0 chr15 81447314 81447460 -22047514 + B1_Mus2 SINE Alu 2 147 0 1 1206 439 111 0 77 chr15 81447506 81447584 -22047390 - B1_Mus1 SINE Alu -74 74 3 1 1206 22 56 0 0 chr15 81447593 81447629 -22047345 + AT_rich Low_complexity Low_complexity 1 36 0 1 1206 414 259 111 35 chr15 81447723 81447867 -22047107 + RSINE1 SINE B4 11 165 0 1 1206 315 0 0 0 chr15 81447928 81447963 -22047011 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1 1206 642 228 56 19 chr15 81447963 81448118 -22046856 - B2_Mm2 SINE B2 -32 163 3 1 1206 1143 61 0 13 chr15 81448144 81448293 -22046681 - B1_Mus1 SINE Alu -1 147 1 1 1206 229 26 53 0 chr15 81448358 81448396 -22046578 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1 1206 531 230 42 21 chr15 81448398 81448540 -22046434 - B1_Mur2 SINE Alu 0 149 5 1 1206 2203 234 184 18 chr15 81448645 81449303 -22045671 - Lx5 LINE L1 -8 7042 6276 1 1206 650 219 7 0 chr15 81449685 81449822 -22045152 + B1_Mus1 SINE Alu 5 142 -6 1 1206 557 268 42 53 chr15 81449924 81450113 -22044861 + B3 SINE B2 5 191 -25 1 1206 594 165 119 8 chr15 81450157 81450291 -22044683 - B1_Mur4 SINE Alu 0 150 2 1 1206 23 0 0 0 chr15 81450292 81450315 -22044659 + AT_rich Low_complexity Low_complexity 1 23 0 1 1206 411 238 94 9 chr15 81450615 81450721 -22044253 + PB1D9 SINE Alu 6 120 0 1 1206 319 224 82 0 chr15 81451007 81451092 -22043882 - B1_Mus2 SINE Alu -22 125 34 1 1206 213 253 47 118 chr15 81451294 81451379 -22043595 - PB1D7 SINE Alu 0 120 42 1 1206 218 197 0 43 chr15 81451953 81452022 -22042952 + T-rich Low_complexity Low_complexity 2 67 0 1 1206 1400 95 16 0 chr15 81452073 81452262 -22042712 + B2_Mm2 SINE B2 2 193 -2 1 1206 877 250 43 78 chr15 81452275 81452622 -22042352 - ORR1C1 LTR MaLR -27 351 17 1 1206 575 193 9 18 chr15 81452613 81452724 -22042250 - B1_Mur2 SINE Alu -38 111 2 1 1206 336 181 11 98 chr15 81452642 81452734 -22042240 - MT2B LTR ERVL -362 239 156 1 1206 429 188 0 0 chr15 81452866 81452951 -22042023 + (TA)n Simple_repeat Simple_repeat 2 86 0 1 1206 249 253 200 0 chr15 81453362 81453437 -22041537 - B1F SINE Alu -1 119 30 1 1206 446 307 0 0 chr15 81453496 81453610 -22041364 - RSINE1 SINE B4 -40 125 12 1 1206 635 243 0 45 chr15 81454232 81454387 -22040587 + B1_Mur1 SINE Alu 2 149 0 1 1206 286 218 33 133 chr15 81454423 81454513 -22040461 + PB1D9 SINE Alu 33 113 -7 1 1206 490 132 36 0 chr15 81454693 81454776 -22040198 + PB1D9 SINE Alu 34 119 -1 1 1206 246 128 0 0 chr15 81454777 81454816 -22040158 + (CATA)n Simple_repeat Simple_repeat 4 42 0 1 1206 531 275 15 15 chr15 81455444 81455577 -22039397 - B1_Mur2 SINE Alu -16 133 1 1 1206 507 292 78 31 chr15 81455647 81455838 -22039136 + B4A SINE B4 35 234 -58 1 1206 337 342 49 39 chr15 81455838 81456042 -22038932 + B3 SINE B2 5 210 -6 1 1206 407 329 204 17 chr15 81456098 81456394 -22038580 - ORR1E LTR MaLR -4 355 5 1 1206 412 206 31 42 chr15 81457338 81457434 -22037540 + PB1D9 SINE Alu 18 112 -8 1 1206 222 200 218 0 chr15 81458203 81458258 -22036716 - RSINE1 SINE B4 -41 124 58 1 1206 411 56 0 0 chr15 81458349 81458403 -22036571 + (TCC)n Simple_repeat Simple_repeat 3 56 0 1 1206 1176 68 0 0 chr15 81458424 81458571 -22036403 - B1_Mus2 SINE Alu 0 147 1 1 1206 463 352 5 50 chr15 81459176 81459263 -22035711 + ID_B1 SINE B4 3 213 -11 1 1206 485 225 43 34 chr15 81459263 81459397 -22035577 + B1_Mur2 SINE Alu 4 138 -11 1 1206 336 264 21 32 chr15 81459398 81459492 -22035482 + B4 SINE B4 86 178 -114 1 1206 28 0 0 0 chr15 81459876 81459904 -22035070 + AT_rich Low_complexity Low_complexity 1 28 0 1 1206 425 293 142 46 chr15 81460621 81461036 -22033938 - L1MB8 LINE L1 -41 6137 5683 1 1206 441 0 0 0 chr15 81461281 81461330 -22033644 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 1206 327 78 0 0 chr15 81461330 81461380 -22033594 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1206 512 282 26 32 chr15 81461384 81461538 -22033436 - B3 SINE B2 -57 159 7 1 1206 318 292 22 0 chr15 81461601 81461690 -22033284 - B1_Mur4 SINE Alu -10 140 50 1 1206 662 259 49 54 chr15 81463223 81463447 -22031527 + ID_B1 SINE B4 2 224 0 1 1206 772 154 70 6 chr15 81463689 81463846 -22031128 + B2_Mm2 SINE B2 14 180 -15 1 1206 405 102 0 0 chr15 81463893 81463952 -22031022 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1206 233 304 36 15 chr15 81464068 81464205 -22030769 + (CTTTG)n Simple_repeat Simple_repeat 3 142 0 1 1206 198 80 60 0 chr15 81464208 81464258 -22030716 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 1 1206 1001 103 7 20 chr15 81465667 81465815 -22029159 + B1_Mus1 SINE Alu 3 148 0 1 1206 356 230 91 11 chr15 81465911 81465999 -22028975 - PB1D10 SINE Alu -17 100 6 1 1206 222 37 0 0 chr15 81466125 81466152 -22028822 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 1 1206 477 196 73 27 chr15 81466154 81466264 -22028710 - B1_Mur2 SINE Alu 0 149 35 1 1206 359 193 72 0 chr15 81466355 81466438 -22028536 + PB1D9 SINE Alu 24 112 -8 1 1206 284 250 202 0 chr15 81467368 81467452 -22027522 - PB1D9 SINE Alu -17 103 3 1 1206 306 0 0 0 chr15 81467761 81467795 -22027179 + (TAGA)n Simple_repeat Simple_repeat 1 34 0 1 1206 555 139 7 2 chr15 81468083 81468200 -22026774 - B1_Mus1 SINE Alu 0 120 1 1 1206 334 215 15 0 chr15 81468541 81468606 -22026368 + B3A SINE B2 40 105 -93 1 1206 292 126 170 0 chr15 81468661 81468743 -22026231 - PB1D7 SINE Alu -5 115 6 1 1206 22 35 0 0 chr15 81468753 81468782 -22026192 + AT_rich Low_complexity Low_complexity 1 29 0 1 1206 465 148 12 0 chr15 81469524 81469605 -22025369 + B1_Mus1 SINE Alu 1 82 -66 1 1206 283 216 22 43 chr15 81469605 81469616 -22025358 + ID_B1 SINE B4 82 171 -53 1 1206 282 116 0 0 chr15 81469616 81469659 -22025315 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1206 478 227 64 0 chr15 81469687 81469797 -22025177 + PB1D9 SINE Alu 4 120 0 1 1206 1204 68 0 0 chr15 81471941 81472088 -22022886 - B1_Mus2 SINE Alu 0 147 1 1 1206 25 75 0 0 chr15 81472114 81472167 -22022807 + AT_rich Low_complexity Low_complexity 1 53 0 1 1206 210 300 41 41 chr15 81472197 81472270 -22022704 + ID_B1 SINE B4 86 158 -66 1 1206 504 205 344 6 chr15 81472272 81472429 -22022545 + B3 SINE B2 1 210 -6 1 1206 534 214 63 0 chr15 81472465 81472591 -22022383 + B1_Mur1 SINE Alu 10 143 -6 1 1206 334 235 8 129 chr15 81472610 81472742 -22022232 + B1_Mur1 SINE Alu 32 147 -2 1 1206 799 140 56 42 chr15 81472845 81472987 -22021987 + B1_Mur4 SINE Alu 1 144 -6 1 1206 1205 62 0 0 chr15 81472994 81473139 -22021835 + B1_Mus2 SINE Alu 1 145 -2 1 1206 513 0 0 0 chr15 81473151 81473208 -22021766 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 1 1206 1260 76 58 21 chr15 81473240 81473428 -22021546 + B2_Mm2 SINE B2 1 195 0 1 1206 369 228 29 29 chr15 81474082 81474186 -22020788 + PB1D9 SINE Alu 12 115 -5 1 1206 423 241 67 33 chr15 81474206 81474326 -22020648 + RSINE1 SINE B4 32 155 -10 1 1206 689 200 14 0 chr15 81474645 81474790 -22020184 - B1_Mus1 SINE Alu 0 148 2 1 1206 266 264 11 54 chr15 81474881 81474973 -22020001 + B3A SINE B2 25 112 -86 1 1206 432 0 0 0 chr15 81475096 81475144 -22019830 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1206 443 226 0 25 chr15 81475743 81475851 -22019123 - PB1D9 SINE Alu -7 113 9 1 1206 380 273 94 12 chr15 81476013 81476158 -22018816 - B3 SINE B2 -18 177 32 1 1206 1058 92 14 0 chr15 81476377 81476519 -22018455 - B1_Mus1 SINE Alu 0 148 5 1 1206 224 118 19 38 chr15 81476594 81476622 -22018352 + T-rich Low_complexity Low_complexity 29 54 0 1 1206 1391 89 16 10 chr15 81476622 81476815 -22018159 - B2_Mm2 SINE B2 0 195 2 1 1206 224 118 19 38 chr15 81476815 81476839 -22018135 + T-rich Low_complexity Low_complexity 4 28 0 1 1206 232 144 396 62 chr15 81476853 81476949 -22018025 - B1_Mm SINE Alu -19 128 1 1 1206 558 206 160 29 chr15 81477289 81477464 -22017510 - B3 SINE B2 -4 212 15 1 1206 261 256 144 98 chr15 81477472 81477645 -22017329 - B3A SINE B2 -16 182 2 1 1206 505 216 121 53 chr15 81478236 81478368 -22016606 - B1_Mus2 SINE Alu -5 142 2 1 1206 494 78 258 42 chr15 81478380 81478500 -22016474 - B2_Mm2 SINE B2 -3 192 47 1 1206 603 78 33 0 chr15 81478542 81478632 -22016342 - B2_Mm1t SINE B2 -14 179 87 1 1206 180 0 0 0 chr15 81480820 81480840 -22014134 + (CAG)n Simple_repeat Simple_repeat 3 22 0 1 1206 34 55 0 0 chr15 81481726 81481781 -22013193 + AT_rich Low_complexity Low_complexity 1 55 0 1 1206 267 54 0 0 chr15 81481901 81481938 -22013036 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 1206 24 32 0 0 chr15 81481980 81482011 -22012963 + AT_rich Low_complexity Low_complexity 1 31 0 1 1206 1394 65 54 0 chr15 81482692 81482876 -22012098 + B2_Mm2 SINE B2 2 195 0 1 1206 248 288 110 0 chr15 81483220 81483293 -22011681 + B1F2 SINE Alu 9 89 -60 1 1206 1089 96 0 0 chr15 81483666 81483812 -22011162 + B1_Mus1 SINE Alu 3 148 0 1 1206 379 257 27 27 chr15 81483853 81483965 -22011009 - B1_Mur1 SINE Alu -27 122 11 1 1206 256 279 0 0 chr15 81484040 81484101 -22010873 - B3 SINE B2 -86 130 70 1 1206 1998 137 186 16 chr15 81484241 81484686 -22010288 - RMER15 LTR ERVL -47 528 8 1 1206 776 185 71 19 chr15 81484686 81484840 -22010134 - RMER15-int LTR ERVL -23 4976 4815 1 1206 895 183 71 82 chr15 81484847 81485127 -22009847 - RMER15-int LTR ERVL -721 4278 4002 1 1206 2074 234 154 46 chr15 81485201 81485915 -22009059 - RMER15-int LTR ERVL -2755 2244 1454 1 1206 1496 282 14 0 chr15 81485929 81486298 -22008676 - RMER15-int LTR ERVL -3685 1314 941 1 1206 414 247 73 45 chr15 81486845 81487023 -22007951 - RLTR41 LTR ERV1 0 446 264 1 1206 1917 249 64 15 chr15 81487236 81487468 -22007506 - RMER15-int LTR ERVL -4367 632 384 1 1206 1367 101 16 11 chr15 81487468 81487659 -22007315 - B2_Mm2 SINE B2 -3 192 1 1 1206 1917 249 64 15 chr15 81487659 81487907 -22007067 - RMER15-int LTR ERVL -4616 383 128 1 1206 1208 55 0 0 chr15 81487919 81488065 -22006909 - B1_Mus2 SINE Alu -1 146 1 1 1206 1057 88 0 0 chr15 81488199 81488347 -22006627 + B2_Mm2 SINE B2 3 150 -45 1 1206 1123 75 0 0 chr15 81488402 81488548 -22006426 + B1_Mus2 SINE Alu 1 146 -1 1 1206 448 215 214 80 chr15 81488681 81488868 -22006106 - ID_B1 SINE B4 -9 215 4 1 1206 699 163 37 44 chr15 81489056 81489191 -22005783 - B1_Mur1 SINE Alu -11 138 5 1 1206 482 220 8 208 chr15 81489206 81489353 -22005621 - B3A SINE B2 -1 197 69 1 1206 1124 68 0 45 chr15 81489353 81489507 -22005467 + B1_Mus1 SINE Alu 2 148 0 1 1206 482 220 8 208 chr15 81489507 81489600 -22005374 - B3A SINE B2 -130 68 5 1 1206 447 256 37 15 chr15 81489626 81489761 -22005213 - B1F SINE Alu 0 149 12 1 1206 261 176 20 0 chr15 81489927 81489978 -22004996 + ID_B1 SINE B4 168 219 -5 1 1206 1057 138 11 22 chr15 81489983 81490149 -22004825 + B2_Mm2 SINE B2 2 168 -27 1 1206 1589 38 5 0 chr15 81490149 81490334 -22004640 - B2_Mm1a SINE B2 -6 187 2 1 1206 1057 138 11 22 chr15 81490334 81490345 -22004629 + B2_Mm2 SINE B2 169 177 -18 1 1206 208 0 62 0 chr15 81490348 81490380 -22004594 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1206 1083 60 0 134 chr15 81490381 81490512 -22004462 + B2_Mm2 SINE B2 27 157 -38 1 1206 1229 55 0 0 chr15 81490512 81490658 -22004316 + B1_Mm SINE Alu 2 147 0 1 1206 1083 60 0 134 chr15 81490658 81490671 -22004303 + B2_Mm2 SINE B2 158 158 -37 1 1206 185 0 40 0 chr15 81490671 81490696 -22004278 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1206 1083 60 0 134 chr15 81490696 81490744 -22004230 + B2_Mm2 SINE B2 158 194 -1 1 1206 362 309 23 23 chr15 81490799 81490928 -22004046 + L2 LINE L2 2676 2804 -615 1 1206 327 235 24 12 chr15 81490932 81491014 -22003960 - ID_B1 SINE B4 -42 182 100 1 1206 253 330 39 20 chr15 81491014 81491034 -22003940 - B1F1 SINE Alu -45 104 1 1 1206 1573 38 0 5 chr15 81491067 81491253 -22003721 + B2_Mm1a SINE B2 2 186 -7 1 1206 195 100 0 0 chr15 81491447 81491477 -22003497 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 1206 857 124 16 0 chr15 81491477 81491606 -22003368 - B1_Mus1 SINE Alu -17 131 1 1 1206 352 265 270 7 chr15 81491622 81491735 -22003239 - B3 SINE B2 -28 188 48 1 1206 1375 94 11 0 chr15 81491735 81491926 -22003048 + B2_Mm1t SINE B2 1 193 0 1 1206 352 265 270 7 chr15 81491926 81491960 -22003014 - B3 SINE B2 -169 47 2 1 1206 554 316 20 10 chr15 81492005 81492034 -22002940 - B3A SINE B2 -1 197 169 1 1206 261 57 0 0 chr15 81492034 81492069 -22002905 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1206 554 316 20 10 chr15 81492069 81492234 -22002740 - B3A SINE B2 -30 168 1 1 1206 480 48 0 0 chr15 81492268 81492331 -22002643 + B2_Mm2 SINE B2 1 63 -132 1 1206 596 267 37 0 chr15 81492333 81492494 -22002480 + Lx8 LINE L1 7122 7288 -185 1 1206 488 162 52 43 chr15 81492565 81492681 -22002293 + PB1D9 SINE Alu 4 120 0 1 1206 1015 204 9 19 chr15 81492712 81492927 -22002047 + B3 SINE B2 4 216 0 1 1206 254 322 0 11 chr15 81493166 81493257 -22001717 - PB1D9 SINE Alu -24 96 7 1 1206 482 269 131 0 chr15 81493178 81493323 -22001651 - B4A SINE B4 -122 170 7 1 1206 758 246 50 0 chr15 81493355 81493554 -22001420 - B3 SINE B2 -6 210 2 1 1206 309 252 110 52 chr15 81493587 81493742 -22001232 - RSINE1 SINE B4 0 165 2 1 1206 1229 35 0 7 chr15 81494002 81494147 -22000827 + B1_Mus2 SINE Alu 2 145 -2 1 1206 189 196 56 16 chr15 81495295 81495364 -21999610 - MIRm SINE MIR -136 140 64 1 1206 235 325 0 38 chr15 81495802 81495882 -21999092 + Tigger5 DNA MER2_type 147 223 -2183 1 1206 287 152 321 0 chr15 81495960 81496072 -21998902 - B2_Mm2 SINE B2 -1 194 47 1 1206 1104 131 11 17 chr15 81496138 81496317 -21998657 - B2_Mm1t SINE B2 -14 179 2 1 1206 637 162 5 0 chr15 81496336 81496451 -21998523 - B1_Mur3 SINE Alu 0 120 1 1 1206 273 146 0 0 chr15 81496451 81496499 -21998475 + (T)n Simple_repeat Simple_repeat 1 48 0 1 1206 826 182 14 0 chr15 81496512 81496660 -21998314 + B1_Mur4 SINE Alu 1 150 0 1 1206 225 204 0 0 chr15 81496660 81496704 -21998270 + A-rich Low_complexity Low_complexity 1 44 0 1 1206 307 282 262 0 chr15 81496728 81496831 -21998143 - B1_Mur1 SINE Alu -18 131 2 1 1206 261 218 0 0 chr15 81496865 81496943 -21998031 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 1206 991 114 12 40 chr15 81496948 81497121 -21997853 - B2_Mm2 SINE B2 -9 186 19 1 1206 1649 47 0 0 chr15 81497143 81497336 -21997638 - B2_Mm1t SINE B2 0 193 1 1 1206 701 143 101 36 chr15 81497341 81497479 -21997495 - B1_Mur3 SINE Alu -2 147 1 1 1206 237 296 48 24 chr15 81497481 81497564 -21997410 + B3A SINE B2 24 108 -90 1 1206 234 262 15 15 chr15 81498420 81498486 -21996488 + CT-rich Low_complexity Low_complexity 2 67 0 1 1206 182 256 0 0 chr15 81498548 81498591 -21996383 - MER5B DNA MER1_type -3 175 133 1 1206 216 345 69 0 chr15 81498808 81498924 -21996050 + PB1 SINE Alu 3 126 -1 1 1206 895 241 43 0 chr15 81499358 81499565 -21995409 - B3 SINE B2 0 216 1 1 1206 532 192 175 0 chr15 81499574 81499694 -21995280 - B1_Mur3 SINE Alu -7 142 2 1 1206 1095 151 18 59 chr15 81499737 81499956 -21995018 - URR1A DNA MER1_type 0 226 17 1 1206 292 232 72 0 chr15 81500397 81500466 -21994508 + B1F SINE Alu 6 79 -70 1 1206 1731 31 0 0 chr15 81501115 81501308 -21993666 - B2_Mm1t SINE B2 0 193 1 2 1206 671 225 16 85 chr15 81501725 81501914 -21993060 + B2_Mm2 SINE B2 2 177 -18 3 1206 871 106 98 0 chr15 81501914 81502046 -21992928 + B1_Mus2 SINE Alu 2 146 -1 4 1206 251 221 23 8 chr15 81502057 81502185 -21992789 + (TA)n Simple_repeat Simple_repeat 1 130 0 5 1206 1045 69 31 0 chr15 81502236 81502366 -21992608 - B1_Mus1 SINE Alu -14 134 1 6 1206 413 197 90 23 chr15 81502366 81502474 -21992500 + B1_Mus1 SINE Alu 12 120 0 7 1206 842 163 7 0 chr15 81502627 81502768 -21992206 + B1_Mus1 SINE Alu 7 148 0 8 1206 342 264 32 124 chr15 81502781 81502831 -21992143 - B3 SINE B2 0 216 168 9 1206 282 29 0 0 chr15 81502831 81502866 -21992108 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1206 342 264 32 124 chr15 81502866 81502915 -21992059 - B3 SINE B2 -49 167 122 9 1206 660 161 78 31 chr15 81502915 81503043 -21991931 + B1_Mus2 SINE Alu 2 135 -12 1 1206 342 264 32 124 chr15 81503043 81503128 -21991846 - B3 SINE B2 -95 121 48 9 1206 627 169 0 75 chr15 81503224 81503358 -21991616 - B1_Mur4 SINE Alu 0 150 27 1 1206 212 77 0 25 chr15 81503360 81503400 -21991574 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1206 583 189 0 0 chr15 81503430 81503536 -21991438 - ID_B1 SINE B4 -2 222 117 1 1206 1207 61 0 0 chr15 81503770 81503917 -21991057 - B1_Mus2 SINE Alu 0 147 1 1 1206 561 250 49 21 chr15 81504004 81504147 -21990827 - B1F SINE Alu -2 147 1 1 1206 26 30 0 0 chr15 81504351 81504384 -21990590 + AT_rich Low_complexity Low_complexity 1 33 0 1 1206 1041 116 14 0 chr15 81506286 81506432 -21988542 - B1_Mur4 SINE Alu 0 150 3 1 1206 732 216 77 2 chr15 81506927 81507117 -21987857 - B3 SINE B2 -6 192 1 1 1206 1570 196 51 68 chr15 81507678 81507890 -21987084 - MTD LTR MaLR -5 414 211 2 1206 687 184 80 7 chr15 81507890 81508027 -21986947 - B1_Mus1 SINE Alu -1 147 1 2 1206 1570 196 51 68 chr15 81508027 81508224 -21986750 - MTD LTR MaLR -209 210 12 2 1206 322 197 42 0 chr15 81508280 81508291 -21986683 + ID SINE ID 69 82 -142 2 1206 384 154 0 9 chr15 81508291 81508365 -21986609 + PB1D9 SINE Alu 2 71 -76 2 1206 486 172 68 3 chr15 81508367 81508481 -21986493 + B3A SINE B2 25 148 -50 2 1206 357 24 0 0 chr15 81508482 81508524 -21986450 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1206 654 245 7 20 chr15 81508731 81508881 -21986093 + B1_Mur2 SINE Alu 2 149 0 2 1206 180 0 0 0 chr15 81509293 81509313 -21985661 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1206 309 241 25 12 chr15 81509932 81510012 -21984962 - ID_B1 SINE B4 -1 223 143 2 1206 1209 54 0 13 chr15 81510050 81510199 -21984775 + B1_Mm SINE Alu 1 147 0 2 1206 774 157 0 19 chr15 81510200 81510362 -21984612 + GA-rich Low_complexity Low_complexity 2 160 0 3 1206 383 208 0 13 chr15 81510376 81510454 -21984520 - RSINE1 SINE B4 -81 84 8 3 1206 1139 72 0 0 chr15 81510501 81510639 -21984335 - B1_Mm SINE Alu -9 138 1 3 1206 343 326 0 0 chr15 81510642 81510731 -21984243 - ID_B1 SINE B4 -70 154 66 2 1206 620 211 110 22 chr15 81510732 81510868 -21984106 - B1_Mur2 SINE Alu 0 149 2 3 1206 926 198 62 5 chr15 81511735 81511928 -21983046 - B3 SINE B2 -11 205 2 3 1206 856 132 12 100 chr15 81511956 81512013 -21982961 - B1_Mus2 SINE Alu -1 146 104 3 1206 216 86 0 0 chr15 81512013 81512048 -21982926 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1206 1161 65 0 0 chr15 81512048 81512187 -21982787 - B1_Mus1 SINE Alu -8 140 2 3 1206 856 132 12 100 chr15 81512187 81512288 -21982686 - B1_Mus2 SINE Alu -44 103 2 3 1206 245 352 70 23 chr15 81512653 81512781 -21982193 - MIRb SINE MIR -82 186 53 3 1206 383 254 109 8 chr15 81514147 81514266 -21980708 - RSINE1 SINE B4 -33 132 2 3 1206 995 97 14 0 chr15 81516306 81516450 -21978524 + B1_Mur4 SINE Alu 3 148 -2 4 1206 239 73 49 0 chr15 81516594 81516635 -21978339 + (TTTTTG)n Simple_repeat Simple_repeat 5 47 0 4 1206 452 237 34 26 chr15 81518134 81518251 -21976723 - B1_Mur2 SINE Alu 0 149 32 4 1206 245 333 145 0 chr15 81518612 81518729 -21976245 + B3 SINE B2 56 189 -27 4 1206 242 128 106 0 chr15 81519381 81519428 -21975546 - PB1D10 SINE Alu -20 97 46 4 1206 935 73 73 0 chr15 81519444 81519568 -21975406 + B1_Mus1 SINE Alu 1 133 -15 4 1206 1083 72 35 18 chr15 81519795 81519965 -21975009 - B2_Mm2 SINE B2 -21 174 2 4 1206 449 305 16 8 chr15 81520334 81520463 -21974511 + RSINE1 SINE B4 21 150 -15 4 1206 278 288 119 91 chr15 81520569 81520826 -21974148 - B4 SINE B4 0 292 49 4 1206 574 252 30 30 chr15 81520718 81520849 -21974125 - B3A SINE B2 -42 156 26 4 1206 289 260 121 99 chr15 81520890 81521031 -21973943 - B4A SINE B4 -116 176 33 5 1206 253 317 98 100 chr15 81521097 81521377 -21973597 + MLT1B LTR MaLR 3 275 -115 5 1206 4188 50 23 2 chr15 81521377 81521894 -21973080 + L1Md_F3 LINE L1 6057 6584 0 5 1206 253 317 98 100 chr15 81521894 81522002 -21972972 + MLT1B LTR MaLR 276 390 0 5 1206 234 135 0 0 chr15 81523113 81523150 -21971824 - B2_Mm1t SINE B2 -121 72 36 5 1206 437 242 195 7 chr15 81523149 81523303 -21971671 + MTD LTR MaLR 164 346 -73 5 1206 180 302 31 113 chr15 81523655 81523752 -21971222 - MIRm SINE MIR -173 103 15 5 1206 596 156 0 0 chr15 81526010 81526106 -21968868 - B1_Mus2 SINE Alu -36 111 16 5 1206 229 281 0 0 chr15 81526456 81526513 -21968461 + GA-rich Low_complexity Low_complexity 1 57 0 5 1207 507 301 85 5 chr15 81528427 81528627 -21966347 - B3 SINE B2 0 216 1 5 1207 354 259 0 12 chr15 81528657 81528743 -21966231 + ID_B1 SINE B4 138 222 -2 5 1207 1215 41 7 0 chr15 81528746 81528892 -21966082 + B1_Mus2 SINE Alu 1 147 0 6 1207 215 80 34 152 chr15 81529002 81529061 -21965913 + B1_Mur2 SINE Alu 97 148 -1 6 1207 220 288 50 67 chr15 81529172 81529183 -21965791 - B1_Mur4 SINE Alu -27 123 10 6 1207 282 279 114 9 chr15 81529183 81529288 -21965686 - ID_B1 SINE B4 -19 205 90 6 1207 1180 64 0 0 chr15 81529333 81529473 -21965501 - B1_Mus1 SINE Alu -7 141 2 6 1207 334 308 43 0 chr15 81529486 81529603 -21965371 - ID_B1 SINE B4 -8 216 95 6 1207 236 298 54 42 chr15 81529803 81529971 -21965003 - L1M3 LINE L1 -408 5775 5606 6 1207 520 164 9 9 chr15 81530061 81530172 -21964802 + CT-rich Low_complexity Low_complexity 2 112 0 6 1207 648 159 92 38 chr15 81530228 81530359 -21964615 + B1_Mus1 SINE Alu 3 140 -8 6 1207 744 258 0 0 chr15 81530360 81530515 -21964459 - B3A SINE B2 -18 180 26 6 1207 618 113 92 53 chr15 81530510 81530641 -21964333 - B1_Mus1 SINE Alu 0 148 13 7 1207 263 216 189 0 chr15 81530718 81530792 -21964182 - B1F SINE Alu -28 92 5 7 1207 524 322 44 0 chr15 81530870 81531050 -21963924 - B3 SINE B2 -28 188 1 7 1207 938 178 385 13 chr15 81531085 81531451 -21963523 + RLTR18B LTR ERVK 1 503 -9 7 1207 413 155 0 40 chr15 81531440 81531514 -21963460 - B3A SINE B2 -122 76 6 7 1207 715 160 0 64 chr15 81531538 81531678 -21963296 - B1_Mus2 SINE Alu -7 140 10 7 1207 225 94 0 0 chr15 81531689 81531721 -21963253 + (TA)n Simple_repeat Simple_repeat 2 33 0 7 1207 1245 97 6 22 chr15 81531723 81531902 -21963072 - B2_Mm1a SINE B2 -16 177 2 7 1207 1185 112 39 16 chr15 81531926 81532108 -21962866 - B2_Mm2 SINE B2 -8 187 2 7 1207 1377 82 49 0 chr15 81532110 81532294 -21962680 - B2_Mm2 SINE B2 -1 194 2 7 1207 917 99 68 12 chr15 81532301 81532464 -21962510 - B2_Mm2 SINE B2 0 195 24 8 1207 376 253 145 57 chr15 81532503 81532662 -21962312 - B3A SINE B2 -4 194 22 8 1207 236 242 103 62 chr15 81532676 81532773 -21962201 - B1F1 SINE Alu 0 149 49 8 1207 793 249 68 24 chr15 81532830 81533036 -21961938 - B3 SINE B2 0 216 2 8 1207 385 157 118 43 chr15 81533150 81533243 -21961731 - ID_B1 SINE B4 -1 223 124 8 1207 416 181 105 11 chr15 81533329 81533424 -21961550 - B1_Mus2 SINE Alu -2 145 42 8 1207 415 312 56 43 chr15 81533468 81533629 -21961345 - RSINE1 SINE B4 -1 164 2 8 1207 741 170 52 0 chr15 81533674 81533809 -21961165 + B1_Mus1 SINE Alu 7 148 0 8 1207 587 177 35 26 chr15 81533822 81533938 -21961036 + B2_Mm2 SINE B2 3 119 -76 8 1207 345 211 28 0 chr15 81533997 81534068 -21960906 + B3A SINE B2 59 131 -67 8 1207 348 288 46 46 chr15 81534053 81534162 -21960812 - B3 SINE B2 -88 128 20 9 1207 1208 68 0 0 chr15 81535035 81535182 -21959792 - B1_Mm SINE Alu 0 147 1 9 1207 1119 75 0 40 chr15 81537106 81537258 -21957716 + B1_Mus2 SINE Alu 2 147 0 9 1207 321 82 0 0 chr15 81537258 81537307 -21957667 + (A)n Simple_repeat Simple_repeat 1 49 0 9 1207 1175 89 0 0 chr15 81537975 81538121 -21956853 + B1_Mus1 SINE Alu 2 147 -1 9 1207 204 40 0 0 chr15 81538210 81538235 -21956739 + (TG)n Simple_repeat Simple_repeat 2 26 0 9 1207 946 84 0 0 chr15 81538277 81538408 -21956566 + B2_Mm2 SINE B2 10 140 -55 9 1207 494 229 51 18 chr15 81538643 81538815 -21956159 + MurERV4_19-int LTR ERVK 4484 4714 -546 9 1207 558 194 56 0 chr15 81538938 81539046 -21955928 + MYSERV6-int LTR ERVK 8439 8552 -407 9 1207 21 0 0 0 chr15 81539281 81539302 -21955672 + AT_rich Low_complexity Low_complexity 1 21 0 9 1207 183 94 0 0 chr15 81539303 81539310 -21955664 + (T)n Simple_repeat Simple_repeat 1 7 0 1 1207 213 39 0 0 chr15 81539310 81539336 -21955638 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 1 1207 183 94 0 0 chr15 81539336 81539360 -21955614 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1207 1164 75 0 0 chr15 81539413 81539559 -21955415 - B1_Mm SINE Alu 0 147 2 1 1207 349 244 11 44 chr15 81540489 81540579 -21954395 - B1F SINE Alu -50 99 13 1 1207 450 197 0 0 chr15 81540859 81540976 -21953998 + CT-rich Low_complexity Low_complexity 2 118 0 1 1207 1178 55 0 7 chr15 81541683 81541831 -21953143 + B1_Mus1 SINE Alu 2 148 0 1 1207 1649 36 5 0 chr15 81543429 81543621 -21951353 + B2_Mm1t SINE B2 1 193 0 1 1207 877 98 0 43 chr15 81544055 81544194 -21950780 - B1_Mus1 SINE Alu 0 148 16 1 1207 183 42 0 0 chr15 81544194 81544218 -21950756 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1207 303 276 124 80 chr15 81544437 81544638 -21950336 - MTE2a LTR MaLR -67 312 103 1 1207 560 271 64 6 chr15 81545427 81545583 -21949391 + B3A SINE B2 3 167 -31 1 1207 428 278 26 9 chr15 81545826 81545942 -21949032 + B4 SINE B4 15 132 -160 1 1207 1013 114 6 18 chr15 81545941 81546110 -21948864 + B2_Mm2 SINE B2 27 193 -2 1 1207 998 80 72 0 chr15 81546110 81546248 -21948726 + B1_Mus1 SINE Alu 1 148 0 1 1207 534 271 38 19 chr15 81546477 81546635 -21948339 + RSINE1 SINE B4 2 162 -3 1 1207 511 159 187 0 chr15 81546660 81546767 -21948207 + B1_Mus1 SINE Alu 1 127 -21 1 1207 543 194 75 37 chr15 81546781 81546915 -21948059 + B1_Mur1 SINE Alu 1 139 -10 1 1207 266 238 274 0 chr15 81547522 81547606 -21947368 - PB1 SINE Alu -19 108 2 1 1207 275 323 61 0 chr15 81547708 81547807 -21947167 + Tigger7 DNA MER2_type 287 391 -2100 1 1207 611 281 111 0 chr15 81547807 81548006 -21946968 + ID_B1 SINE B4 3 223 -1 1 1207 1161 80 63 0 chr15 81548019 81548194 -21946780 + B2_Mm2 SINE B2 8 193 -2 1 1207 400 241 70 26 chr15 81548210 81548325 -21946649 + PB1D9 SINE Alu 1 120 0 1 1207 316 293 62 81 chr15 81549507 81549667 -21945307 - RSINE1 SINE B4 -6 159 3 1 1207 206 187 95 0 chr15 81549717 81549794 -21945180 - L2c LINE L2 -188 3187 3103 1 1207 391 311 53 8 chr15 81551429 81551562 -21943412 - ID_B1 SINE B4 0 224 86 1 1207 877 223 87 0 chr15 81551694 81551878 -21943096 + B3 SINE B2 1 200 -16 1 1207 225 301 60 12 chr15 81552682 81552766 -21942208 - ID_B1 SINE B4 -3 221 134 1 1207 479 228 0 66 chr15 81552943 81553079 -21941895 + B1_Mur3 SINE Alu 18 144 -5 1 1207 1187 43 0 0 chr15 81553168 81553306 -21941668 + B1_Mus2 SINE Alu 1 138 -9 1 1207 228 86 0 0 chr15 81553306 81553341 -21941633 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1207 381 212 62 0 chr15 81553622 81553702 -21941272 - RSINE1 SINE B4 -36 129 45 1 1207 459 223 0 21 chr15 81553868 81553964 -21941010 + ID_B1 SINE B4 105 198 -26 1 1207 450 160 0 217 chr15 81553871 81554023 -21940951 + B1_Mus1 SINE Alu 28 146 -2 1 1207 237 227 0 85 chr15 81554548 81554630 -21940344 + B1F SINE Alu 73 147 -2 1 1207 480 120 73 42 chr15 81554673 81554769 -21940205 - B1_Mm SINE Alu 0 147 49 1 1207 201 74 0 0 chr15 81554844 81554871 -21940103 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1207 1220 55 0 7 chr15 81555097 81555244 -21939730 + B1_Mus2 SINE Alu 2 147 0 1 1207 269 263 183 9 chr15 81555298 81555413 -21939561 + B3A SINE B2 45 179 -19 1 1207 287 270 68 0 chr15 81555470 81555544 -21939430 + B3A SINE B2 2 80 -118 1 1207 537 143 214 18 chr15 81555637 81555786 -21939188 + B3 SINE B2 4 177 -18 1 1207 586 218 5 11 chr15 81555785 81555929 -21939045 + PB1D9 SINE Alu 10 150 0 1 1207 180 97 0 0 chr15 81555984 81556015 -21938959 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1207 1644 52 0 0 chr15 81556024 81556217 -21938757 - B2_Mm1a SINE B2 0 193 1 1 1207 717 236 169 72 chr15 81556825 81557104 -21937870 - MER21B LTR ERV1 -92 771 466 1 1207 588 214 24 0 chr15 81557206 81557332 -21937642 - B1F2 SINE Alu -15 134 6 1 1207 469 300 130 39 chr15 81557335 81557543 -21937431 - MER21B LTR ERV1 -390 473 247 1 1207 238 220 20 0 chr15 81557653 81557703 -21937271 - MER21B LTR ERV1 -811 52 2 1 1207 753 58 0 0 chr15 81557885 81557988 -21936986 + BC1_Mm scRNA scRNA 2 104 -48 1 1207 292 120 20 0 chr15 81558010 81558060 -21936914 + ORR1C2 LTR MaLR 1 51 -333 1 1207 734 245 17 80 chr15 81558404 81558643 -21936331 + ID_B1 SINE B4 1 224 0 1 1207 182 116 0 23 chr15 81558654 81558698 -21936276 + (CAAA)n Simple_repeat Simple_repeat 3 45 0 1 1207 208 333 36 0 chr15 81558791 81558902 -21936072 - L2a LINE L2 -286 3140 3026 1 1207 251 270 68 0 chr15 81559031 81559105 -21935869 - RMER21A LTR ERV1 -59 888 810 1 1207 1182 185 88 88 chr15 81559096 81559482 -21935492 - RMER10B LTR ERVL -12 386 1 1 1207 250 242 86 21 chr15 81560771 81560864 -21934110 + L1MC4a LINE L1 7268 7366 -516 1 1207 223 203 13 13 chr15 81560938 81561013 -21933961 + GA-rich Low_complexity Low_complexity 2 76 0 1 1207 1170 27 0 14 chr15 81561113 81561261 -21933713 + B1_Mm SINE Alu 1 146 -1 1 1207 24 0 0 0 chr15 81561832 81561856 -21933118 + AT_rich Low_complexity Low_complexity 1 24 0 1 1207 739 240 52 10 chr15 81561866 81562060 -21932914 + B3 SINE B2 2 203 -13 1 1207 1169 54 0 13 chr15 81562085 81562235 -21932739 - B1_Mus1 SINE Alu 0 148 1 1 1207 686 215 0 0 chr15 81562274 81562404 -21932570 - B1_Mus2 SINE Alu -9 138 9 1 1207 349 250 32 104 chr15 81562309 81562434 -21932540 - MT2B LTR ERVL -343 258 143 1 1207 274 192 2 0 chr15 81562454 81562515 -21932459 - B3A SINE B2 -129 66 5 1 1207 346 211 39 60 chr15 81562530 81562649 -21932325 - PB1D10 SINE Alu -1 148 28 1 1207 312 261 34 11 chr15 81562849 81562938 -21932036 - B3 SINE B2 -125 91 1 1 1207 901 241 25 0 chr15 81562958 81563161 -21931813 - B3 SINE B2 -7 209 2 1 1207 351 65 0 0 chr15 81563209 81563255 -21931719 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1207 274 354 12 0 chr15 81563365 81563447 -21931527 - ID_B1 SINE B4 -61 163 81 1 1207 1207 21 14 0 chr15 81563553 81563698 -21931276 - B1_Mus2 SINE Alu 0 147 1 1 1207 21 0 0 0 chr15 81563708 81563729 -21931245 + AT_rich Low_complexity Low_complexity 1 21 0 1 1207 765 199 205 0 chr15 81563740 81563911 -21931063 + B3 SINE B2 2 207 -9 1 1207 874 269 91 36 chr15 81563930 81564239 -21930735 - ORR1D2 LTR MaLR -43 327 2 1 1207 601 169 0 8 chr15 81564240 81564359 -21930615 - ORR1D2-int LTR MaLR 0 1370 1253 1 1207 586 167 0 0 chr15 81564359 81564461 -21930513 + B1_Mus1 SINE Alu 1 102 -46 1 1207 419 254 35 119 chr15 81564682 81564883 -21930091 + RLTR23 LTR ERV1 247 430 0 1 1207 262 109 22 0 chr15 81564884 81564930 -21930044 + B1_Mm SINE Alu 100 146 -1 1 1207 1322 77 11 6 chr15 81564931 81565114 -21929860 + B2_Mm2 SINE B2 1 184 -11 1 1207 743 116 8 0 chr15 81565143 81565264 -21929710 + (GGAA)n Simple_repeat Simple_repeat 3 124 0 1 1207 327 282 48 102 chr15 81565267 81565433 -21929541 - ORR1D2-int LTR MaLR -168 1202 1046 1 1207 935 215 28 23 chr15 81565476 81565690 -21929284 - B3 SINE B2 0 216 2 1 1207 236 171 0 0 chr15 81565709 81565750 -21929224 - ORR1D2-int LTR MaLR -325 1045 1005 1 1207 190 293 8 8 chr15 81565778 81565829 -21929145 + CT-rich Low_complexity Low_complexity 68 118 0 1 1207 1059 75 7 7 chr15 81565829 81565977 -21928997 - B1_Mus1 SINE Alu 0 148 1 1 1207 190 293 8 8 chr15 81565977 81566042 -21928932 + CT-rich Low_complexity Low_complexity 2 67 0 1 1207 2437 239 55 165 chr15 81566060 81567141 -21927833 - ORR1D2-int LTR MaLR -392 978 16 1 1207 1158 239 133 24 chr15 81567162 81567492 -21927482 - ORR1D2 LTR MaLR 0 370 5 1 1207 272 200 143 0 chr15 81567493 81567563 -21927411 - PB1D9 SINE Alu -22 98 19 1 1207 1507 133 218 3 chr15 81567656 81567964 -21927010 - RMER10B LTR ERVL 0 398 25 1 1207 276 258 108 0 chr15 81567973 81568066 -21926908 - MLT2B4 LTR ERVL -9 547 445 1 1207 917 296 75 47 chr15 81568148 81568542 -21926432 - MLT2B4 LTR ERVL -100 456 1 1 1207 1309 70 5 21 chr15 81568654 81568843 -21926131 + B2_Mm1t SINE B2 2 187 -6 1 1207 1070 103 48 11 chr15 81568854 81569000 -21925974 + B2_Mm2 SINE B2 1 150 -45 1 1207 411 38 0 0 chr15 81569000 81569053 -21925921 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 1 1207 1070 103 48 11 chr15 81569053 81569093 -21925881 + B2_Mm2 SINE B2 151 194 -1 1 1207 647 202 9 0 chr15 81569112 81569226 -21925748 + PB1D9 SINE Alu 1 115 -5 1 1207 605 292 130 16 chr15 81569477 81569724 -21925250 - MLT1A0 LTR MaLR -13 352 78 1 1207 820 264 63 109 chr15 81570292 81570734 -21924240 + RLTR23 LTR ERV1 8 429 -1 1 1207 838 230 5 30 chr15 81570801 81571003 -21923971 + B3 SINE B2 6 202 -14 1 1207 225 0 0 0 chr15 81571004 81571029 -21923945 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 1207 1106 44 0 0 chr15 81571099 81571235 -21923739 + B1_Mus1 SINE Alu 5 140 -8 1 1207 198 0 0 0 chr15 81571235 81571257 -21923717 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1207 218 279 101 14 chr15 81571720 81571789 -21923185 - PB1D10 SINE Alu -31 86 12 1 1207 243 0 0 0 chr15 81571795 81571822 -21923152 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1207 551 171 195 0 chr15 81572236 81572359 -21922615 + B1_Mur3 SINE Alu 2 148 -1 1 1207 1335 87 0 30 chr15 81572363 81572564 -21922410 + B2_Mm2 SINE B2 1 195 0 1 1207 728 126 0 36 chr15 81572564 81572629 -21922345 + A-rich Low_complexity Low_complexity 1 61 0 1 1207 1438 68 16 0 chr15 81572629 81572819 -21922155 + B2_Mm2 SINE B2 2 194 -1 1 1207 728 126 0 36 chr15 81572819 81572888 -21922086 + A-rich Low_complexity Low_complexity 62 130 0 1 1207 1171 99 5 68 chr15 81572888 81573066 -21921908 + B2_Mm2 SINE B2 3 169 -26 2 1207 1435 68 5 0 chr15 81573066 81573257 -21921717 - B2_Mm1t SINE B2 0 193 2 2 1207 1171 99 5 68 chr15 81573257 81573284 -21921690 + B2_Mm2 SINE B2 170 195 0 2 1207 792 74 5 27 chr15 81573287 81573421 -21921553 + B1_Mur4 SINE Alu 2 138 -12 2 1207 336 278 24 0 chr15 81573564 81573665 -21921309 + MIRb SINE MIR 90 204 -64 2 1207 24 0 0 0 chr15 81574178 81574202 -21920772 + AT_rich Low_complexity Low_complexity 1 24 0 2 1207 1069 59 0 0 chr15 81574202 81574337 -21920637 + B1_Mus1 SINE Alu 2 136 -12 2 1207 237 83 0 0 chr15 81574340 81574376 -21920598 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 2 1207 407 159 289 9 chr15 81574390 81574504 -21920470 - B1_Mur2 SINE Alu -2 147 2 2 1207 294 299 9 9 chr15 81574531 81574639 -21920335 + MER31A LTR ERV1 114 221 -264 2 1207 1053 199 5 5 chr15 81574638 81574845 -21920129 + B3 SINE B2 6 212 -4 2 1207 728 248 88 26 chr15 81574864 81575092 -21919882 + MER31A LTR ERV1 226 467 -18 2 1207 21 89 0 0 chr15 81575787 81575843 -21919131 + GC_rich Low_complexity Low_complexity 1 56 0 2 1207 24 77 0 0 chr15 81575849 81575901 -21919073 + GC_rich Low_complexity Low_complexity 1 52 0 2 1207 369 0 0 0 chr15 81577574 81577615 -21917359 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 2 1207 359 245 58 21 chr15 81577750 81577845 -21917129 + PB1D10 SINE Alu 8 102 -15 2 1207 219 36 0 0 chr15 81577847 81577875 -21917099 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 1207 536 196 0 0 chr15 81577891 81577988 -21916986 - B1_Mus2 SINE Alu 0 147 51 2 1207 580 266 84 11 chr15 81578036 81578215 -21916759 + B3A SINE B2 7 198 0 2 1207 737 116 69 48 chr15 81578220 81578365 -21916609 + B1_Mus1 SINE Alu 1 148 0 2 1207 207 139 0 0 chr15 81578532 81578568 -21916406 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1207 723 216 131 5 chr15 81578576 81578767 -21916207 + B3 SINE B2 2 216 0 2 1207 622 248 57 0 chr15 81578802 81578943 -21916031 - RSINE1 SINE B4 -13 152 4 2 1207 1179 29 0 0 chr15 81579184 81579323 -21915651 + B1_Mus1 SINE Alu 4 142 -6 2 1207 29 28 0 0 chr15 81579663 81579699 -21915275 + AT_rich Low_complexity Low_complexity 1 36 0 2 1207 1017 103 0 7 chr15 81579700 81579847 -21915127 - B1_Mus2 SINE Alu 0 147 2 2 1207 203 221 233 44 chr15 81579908 81579998 -21914976 - MIRc SINE MIR -122 146 40 2 1207 405 246 73 73 chr15 81580749 81580885 -21914089 - B1F2 SINE Alu -1 148 13 2 1207 714 246 38 10 chr15 81580963 81581172 -21913802 + B3 SINE B2 2 216 0 2 1207 908 115 14 7 chr15 81581194 81581334 -21913640 + B1_Mus1 SINE Alu 1 141 -7 2 1207 495 167 0 0 chr15 81581336 81581426 -21913548 + GA-rich Low_complexity Low_complexity 1 90 0 2 1207 2466 21 49 41 chr15 81581522 81581736 -21913238 + ORR1A0-int LTR MaLR 1444 1654 -138 2 1207 1313 65 38 5 chr15 81581736 81581921 -21913053 - B2_Mm2 SINE B2 -4 191 1 2 1207 2466 21 49 41 chr15 81581921 81582051 -21912923 + ORR1A0-int LTR MaLR 1655 1791 -1 2 1207 2152 34 0 88 chr15 81582052 81582371 -21912603 + ORR1A0 LTR MaLR 1 291 -55 2 1207 189 0 0 0 chr15 81582373 81582394 -21912580 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1207 1216 71 0 6 chr15 81582401 81582570 -21912404 + B2_Mm2 SINE B2 2 169 -26 2 1207 593 246 82 44 chr15 81582593 81582776 -21912198 + B3A SINE B2 8 197 -1 2 1207 632 256 71 25 chr15 81582772 81582968 -21912006 - B3 SINE B2 -11 205 1 2 1207 221 230 10 155 chr15 81583070 81583173 -21911801 - MIR SINE MIR -64 198 111 2 1207 329 343 33 61 chr15 81583689 81583903 -21911071 - MIRb SINE MIR -36 232 25 2 1207 743 143 24 0 chr15 81583969 81584095 -21910879 - B1_Mus2 SINE Alu -2 145 17 2 1207 465 246 16 85 chr15 81584105 81584192 -21910782 - ID_B1 SINE B4 -17 207 130 2 1207 368 217 41 52 chr15 81584192 81584289 -21910685 + B4 SINE B4 2 97 -195 2 1207 191 266 9 0 chr15 81584554 81584667 -21910307 + (CCCTAA)n Simple_repeat Simple_repeat 1 114 0 2 1207 348 283 30 0 chr15 81584906 81585005 -21909969 + B4A SINE B4 73 174 -118 2 1207 582 165 13 30 chr15 81585178 81585304 -21909670 - B1F SINE Alu 0 149 34 2 1207 595 332 52 24 chr15 81586431 81586569 -21908405 - B4 SINE B4 0 292 148 2 1207 4354 56 24 27 chr15 81586569 81587158 -21907816 - LTRIS_Mus LTR ERV1 0 587 1 2 1207 595 332 52 24 chr15 81587158 81587229 -21907745 - B4 SINE B4 -145 147 77 2 1207 243 221 0 0 chr15 81587231 81587261 -21907713 + T-rich Low_complexity Low_complexity 39 68 0 2 1207 888 86 56 28 chr15 81587261 81587404 -21907570 - B1_Mus2 SINE Alu 0 147 1 2 1207 243 221 0 0 chr15 81587404 81587441 -21907533 + T-rich Low_complexity Low_complexity 2 38 0 2 1207 332 207 135 0 chr15 81587621 81587732 -21907242 - B3 SINE B2 -89 127 2 2 1207 280 253 139 0 chr15 81587737 81587816 -21907158 - B4 SINE B4 -201 91 2 2 1207 879 232 19 10 chr15 81587869 81588078 -21906896 + B3 SINE B2 1 211 -5 2 1207 185 0 40 0 chr15 81588571 81588596 -21906378 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2 1207 797 125 15 7 chr15 81588607 81588744 -21906230 - B1_Mus2 SINE Alu -1 146 9 2 1207 376 227 177 25 chr15 81588849 81589007 -21905967 + B3A SINE B2 1 182 -16 2 1207 394 235 102 102 chr15 81589041 81589188 -21905786 + B4 SINE B4 77 223 -69 2 1207 716 173 75 0 chr15 81589058 81589191 -21905783 + B1_Mur1 SINE Alu 7 149 0 2 1207 233 268 91 20 chr15 81589331 81589430 -21905544 + MIRb SINE MIR 90 195 -73 2 1207 489 242 272 51 chr15 81589611 81589662 -21905312 - B4 SINE B4 -4 288 225 2 1207 680 226 22 103 chr15 81589662 81589894 -21905080 - B3 SINE B2 0 216 4 2 1207 489 242 272 51 chr15 81589894 81590077 -21904897 - B4 SINE B4 -68 224 3 2 1207 280 343 82 78 chr15 81590082 81590313 -21904661 - Charlie4a DNA MER1_type -189 319 88 2 1207 412 320 46 0 chr15 81590705 81590858 -21904116 + MIR SINE MIR 28 187 -75 2 1207 421 273 129 0 chr15 81591395 81591534 -21903440 - L1MC4a LINE L1 -40 7842 7686 2 1207 375 127 0 0 chr15 81591539 81591602 -21903372 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1207 1421 17 79 0 chr15 81591628 81591646 -21903328 - B2_Mm1a SINE B2 0 193 176 2 1207 243 0 0 0 chr15 81591646 81591673 -21903301 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 2 1207 1421 17 79 0 chr15 81591673 81591832 -21903142 - B2_Mm1a SINE B2 -18 175 3 2 1207 311 236 0 11 chr15 81592231 81592251 -21902723 - B1_Mur4 SINE Alu 0 150 131 2 1207 1123 81 0 0 chr15 81592251 81592399 -21902575 - B1_Mus1 SINE Alu 0 148 1 2 1207 207 0 0 0 chr15 81592403 81592426 -21902548 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1207 311 241 0 10 chr15 81592426 81592498 -21902476 - B1_Mur4 SINE Alu -20 130 53 2 1207 809 191 79 20 chr15 81592503 81592706 -21902268 - B3 SINE B2 -1 215 1 2 1207 295 367 79 13 chr15 81593361 81593513 -21901461 + MIR SINE MIR 24 185 -77 2 1207 636 53 147 0 chr15 81593950 81594045 -21900929 - B2_Mm2 SINE B2 -85 110 2 2 1207 309 26 0 0 chr15 81594091 81594129 -21900845 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1207 482 228 21 106 chr15 81594133 81594275 -21900699 - ID_B1 SINE B4 -11 213 84 2 1207 219 167 36 18 chr15 81594281 81594336 -21900638 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1207 285 250 9 132 chr15 81594346 81594452 -21900522 - RSINE1 SINE B4 0 165 73 2 1207 623 200 64 0 chr15 81594530 81594670 -21900304 - B1_Mur2 SINE Alu 0 149 1 2 1207 1026 95 0 33 chr15 81595252 81595404 -21899570 - B1_Mm SINE Alu 0 147 1 2 1207 568 287 7 0 chr15 81595621 81595764 -21899210 + B1F2 SINE Alu 1 144 -5 2 1207 1324 79 11 0 chr15 81595772 81595961 -21899013 + B2_Mm1t SINE B2 2 192 -1 2 1207 322 215 12 12 chr15 81596593 81596673 -21898301 - PB1D10 SINE Alu -36 81 2 2 1207 253 279 69 11 chr15 81596601 81596688 -21898286 - ID_B1 SINE B4 -70 154 63 2 1207 1105 75 0 0 chr15 81598668 81598814 -21896160 - B1_Mus2 SINE Alu -1 146 1 2 1207 471 252 0 89 chr15 81599762 81599919 -21895055 - B1_Mur1 SINE Alu -6 143 1 2 1207 387 200 0 24 chr15 81599934 81600016 -21894958 - B3 SINE B2 0 216 137 2 1207 261 180 0 153 chr15 81600007 81600079 -21894895 + B4 SINE B4 5 65 -227 2 1207 372 207 16 8 chr15 81600093 81600215 -21894759 + (CATATA)n Simple_repeat Simple_repeat 4 126 0 2 1207 399 41 0 0 chr15 81600252 81600301 -21894673 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1207 243 0 0 0 chr15 81600320 81600347 -21894627 + (TAGA)n Simple_repeat Simple_repeat 2 28 0 2 1207 1168 55 0 0 chr15 81600386 81600532 -21894442 - B1_Mus2 SINE Alu 0 147 2 2 1207 882 72 62 35 chr15 81600561 81600705 -21894269 - B1_Mus1 SINE Alu 0 148 1 2 1207 188 35 35 0 chr15 81600804 81600833 -21894141 + (CAA)n Simple_repeat Simple_repeat 3 32 0 2 1207 2305 132 17 37 chr15 81601052 81601234 -21893740 - ORR1B1 LTR MaLR 0 394 227 2 1207 1390 31 5 111 chr15 81601234 81601263 -21893711 - B2_Mm2 SINE B2 0 195 171 2 1207 1132 75 0 0 chr15 81601263 81601410 -21893564 + B1_Mus2 SINE Alu 1 147 0 2 1207 1390 31 5 111 chr15 81601410 81601597 -21893377 - B2_Mm2 SINE B2 -25 170 2 2 1207 2305 132 17 37 chr15 81601597 81601726 -21893248 - ORR1B1 LTR MaLR -168 226 96 2 1207 1403 43 27 0 chr15 81601726 81601913 -21893061 - B2_Mm1t SINE B2 0 193 2 2 1207 2305 132 17 37 chr15 81601913 81602002 -21892972 - ORR1B1 LTR MaLR -299 95 3 2 1207 186 318 33 22 chr15 81603407 81603497 -21891477 + MIRb SINE MIR 130 220 -48 2 1207 663 169 0 25 chr15 81604730 81604851 -21890123 - B1_Mus1 SINE Alu -28 120 3 2 1207 182 306 56 0 chr15 81605469 81605541 -21889433 - MIRm SINE MIR -118 158 83 2 1207 694 133 67 0 chr15 81605839 81605959 -21889015 + B1_Mur2 SINE Alu 22 149 0 2 1207 199 241 77 30 chr15 81608597 81608710 -21886264 + MIRc SINE MIR 18 140 -128 2 1207 186 291 0 68 chr15 81611169 81611228 -21883746 - MIRm SINE MIR -105 171 117 2 1207 740 187 7 7 chr15 81611730 81611865 -21883109 - B1_Mur1 SINE Alu -10 139 5 2 1207 231 268 29 42 chr15 81612074 81612192 -21882782 - MIRb SINE MIR -71 197 78 3 1207 255 319 164 0 chr15 81612615 81612731 -21882243 - MIRb SINE MIR -17 251 117 3 1207 193 312 127 45 chr15 81612895 81613029 -21881945 + MIRb SINE MIR 33 177 -91 3 1207 1243 86 27 0 chr15 81614522 81614684 -21880290 + B2_Mm2 SINE B2 1 162 -33 3 1207 209 0 0 88 chr15 81614684 81614718 -21880256 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 3 1207 1243 86 27 0 chr15 81614718 81614741 -21880233 + B2_Mm2 SINE B2 163 190 -5 3 1207 974 60 97 0 chr15 81614751 81614885 -21880089 + B1_Mus2 SINE Alu 1 147 0 3 1207 189 107 0 0 chr15 81614886 81614914 -21880060 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1207 318 218 22 44 chr15 81615110 81615201 -21879773 + RSINE1 SINE B4 49 137 -28 3 1207 691 263 106 22 chr15 81615400 81615758 -21879216 - L2 LINE L2 -705 2714 2327 3 1207 860 186 130 21 chr15 81616710 81616902 -21878072 + B3 SINE B2 1 213 -3 3 1207 444 238 49 0 chr15 81617077 81617199 -21877775 + B1F SINE Alu 5 132 -17 3 1207 326 260 122 75 chr15 81618396 81618675 -21876299 - B4A SINE B4 0 292 1 3 1207 1378 79 21 0 chr15 81618693 81618883 -21876091 - B2_Mm2 SINE B2 0 195 2 3 1207 839 274 117 77 chr15 81619017 81619087 -21875887 - RCHARR1 DNA MER1_type -29 945 876 3 1207 613 229 35 0 chr15 81619087 81619231 -21875743 - B1F SINE Alu 0 149 1 3 1207 839 274 117 77 chr15 81619231 81619563 -21875411 - RCHARR1 DNA MER1_type -99 875 527 3 1207 762 174 15 0 chr15 81619813 81619945 -21875029 + B1_Mur3 SINE Alu 1 134 -15 3 1207 503 291 48 2 chr15 81619958 81620103 -21874871 + B3A SINE B2 29 178 -38 3 1207 258 81 0 0 chr15 81620137 81620174 -21874800 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1207 1348 75 11 0 chr15 81620234 81620422 -21874552 + B2_Mm1a SINE B2 2 191 -2 3 1207 348 24 0 0 chr15 81620430 81620471 -21874503 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1207 2035 163 26 16 chr15 81620472 81620852 -21874122 - MTC LTR MaLR -37 384 1 3 1207 252 176 48 103 chr15 81620852 81620916 -21874058 - B1_Mur4 SINE Alu -76 74 6 3 1207 1176 54 0 7 chr15 81620941 81621090 -21873884 + B1_Mus1 SINE Alu 1 148 0 3 1207 706 237 102 0 chr15 81621101 81621287 -21873687 - B3 SINE B2 -11 205 1 3 1207 1447 284 80 7 chr15 81621287 81621747 -21873227 - RCHARR1 DNA MER1_type -479 495 2 3 1207 290 218 226 10 chr15 81621747 81621849 -21873125 + B3A SINE B2 20 143 -55 3 1207 297 0 0 0 chr15 81621854 81621887 -21873087 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1207 556 210 61 17 chr15 81621916 81622047 -21872927 + B1_Mur2 SINE Alu 12 148 -1 3 1207 226 254 15 31 chr15 81624660 81624725 -21870249 + MIR3 SINE MIR 100 163 -45 3 1207 237 308 49 24 chr15 81624820 81624943 -21870031 - MIR3 SINE MIR -37 171 46 3 1207 262 333 36 18 chr15 81627207 81627317 -21867657 - PB1D9 SINE Alu -7 113 2 3 1207 227 162 0 0 chr15 81627412 81627449 -21867525 - B1_Mur1 SINE Alu -16 133 97 3 1207 277 289 99 43 chr15 81627470 81627611 -21867363 - B1_Mur3 SINE Alu 0 149 1 3 1207 1011 57 0 21 chr15 81627758 81627901 -21867073 + B2_Mm2 SINE B2 1 140 -55 3 1207 425 93 120 0 chr15 81627901 81627976 -21866998 + B1_Mus2 SINE Alu 64 147 0 3 1207 351 276 66 66 chr15 81629253 81629389 -21865585 - MLT1A1 LTR MaLR -4 404 269 3 1207 388 173 224 103 chr15 81629455 81629482 -21865492 - B1_Mur2 SINE Alu -1 148 123 3 1207 1022 122 0 0 chr15 81629482 81629629 -21865345 + B1_Mur4 SINE Alu 4 150 0 3 1207 388 173 224 103 chr15 81629629 81629717 -21865257 - B1_Mur2 SINE Alu -27 122 19 3 1207 1621 166 172 11 chr15 81630091 81630539 -21864435 + MT2A LTR ERVL 4 523 -10 3 1207 550 221 47 31 chr15 81630541 81630699 -21864275 + B3A SINE B2 32 184 -11 3 1207 543 283 6 56 chr15 81630776 81630937 -21864037 + RSINE1 SINE B4 13 165 0 3 1207 332 247 14 0 chr15 81630971 81631044 -21863930 + PB1D10 SINE Alu 1 74 -43 3 1207 330 266 146 15 chr15 81631047 81631177 -21863797 + RSINE1 SINE B4 4 150 -15 3 1207 189 0 0 0 chr15 81631181 81631202 -21863772 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1207 882 210 9 77 chr15 81631236 81631458 -21863516 - B3 SINE B2 -5 211 5 3 1207 231 267 17 0 chr15 81631469 81631529 -21863445 + (TA)n Simple_repeat Simple_repeat 1 61 0 3 1207 225 343 40 0 chr15 81631629 81631728 -21863246 + B1F1 SINE Alu 2 104 -45 3 1207 1122 75 0 0 chr15 81632274 81632421 -21862553 - B1_Mus2 SINE Alu 0 147 1 3 1207 227 293 12 24 chr15 81633972 81634056 -21860918 - ID SINE ID -141 83 1 3 1207 261 248 57 127 chr15 81638477 81638634 -21856340 + MT2B2 LTR ERVL 133 278 -306 3 1207 729 172 0 24 chr15 81638527 81638652 -21856322 + B1_Mur1 SINE Alu 19 140 -9 3 1207 451 301 81 0 chr15 81638699 81638835 -21856139 + RSINE1 SINE B4 13 159 -6 3 1207 558 221 232 0 chr15 81638875 81639056 -21855918 + ID_B1 SINE B4 1 223 -1 3 1207 922 134 0 45 chr15 81639116 81639272 -21855702 - B1_Mur2 SINE Alu 0 149 1 3 1207 243 265 0 29 chr15 81639745 81639815 -21855159 + GA-rich Low_complexity Low_complexity 3 70 0 3 1207 502 241 26 0 chr15 81640058 81640174 -21854800 - RSINE1 SINE B4 -38 127 9 3 1207 216 171 0 0 chr15 81641324 81641365 -21853609 + (CCCCG)n Simple_repeat Simple_repeat 2 42 0 3 1207 21 0 0 0 chr15 81642043 81642064 -21852910 + GC_rich Low_complexity Low_complexity 1 21 0 3 1207 24 0 0 0 chr15 81642210 81642234 -21852740 + GC_rich Low_complexity Low_complexity 1 24 0 3 1207 215 243 27 67 chr15 81643442 81643517 -21851457 - MIRc SINE MIR -112 156 85 3 1207 610 250 14 35 chr15 81643676 81643821 -21851153 + ID_B1 SINE B4 83 224 0 3 1207 22 0 0 0 chr15 81644052 81644074 -21850900 + AT_rich Low_complexity Low_complexity 1 22 0 3 1207 199 211 0 0 chr15 81644744 81644782 -21850192 - L2c LINE L2 -64 3323 3286 3 1207 196 275 0 101 chr15 81644847 81644936 -21850038 - MIR SINE MIR -123 139 60 3 1207 296 235 35 0 chr15 81646103 81646188 -21848786 - MIR SINE MIR -128 134 47 3 1207 186 71 0 0 chr15 81646312 81646340 -21848634 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 3 1207 398 236 38 1 chr15 81646603 81646713 -21848261 - B3A SINE B2 -80 113 1 3 1207 276 252 33 2 chr15 81646716 81646784 -21848190 + PB1 SINE Alu 19 86 -228 3 1207 212 292 0 0 chr15 81646770 81646818 -21848156 + BC1_Mm scRNA scRNA 14 61 -91 3 1207 988 197 65 15 chr15 81646820 81647021 -21847953 + B3 SINE B2 3 213 -3 3 1207 30 0 0 0 chr15 81647060 81647090 -21847884 + AT_rich Low_complexity Low_complexity 1 30 0 3 1207 756 235 153 0 chr15 81647106 81647289 -21847685 + B3 SINE B2 6 216 0 3 1207 235 136 45 0 chr15 81647417 81647461 -21847513 + B4A SINE B4 191 236 -56 3 1207 409 293 0 10 chr15 81647560 81647660 -21847314 + RSINE1 SINE B4 64 162 -3 3 1207 264 261 31 0 chr15 81647686 81647751 -21847223 + B4A SINE B4 219 285 -7 3 1207 318 215 15 0 chr15 81647807 81647872 -21847102 - PB1D9 SINE Alu -52 68 3 3 1207 311 341 97 16 chr15 81647877 81648062 -21846912 - L1ME3A LINE L1 -55 6118 5919 3 1207 376 241 45 22 chr15 81648103 81648192 -21846782 + B1F SINE Alu 29 119 -30 3 1207 397 241 196 42 chr15 81648238 81648381 -21846593 + RSINE1 SINE B4 1 165 0 3 1207 773 171 7 28 chr15 81648606 81648750 -21846224 + B1_Mur2 SINE Alu 2 142 -7 3 1207 221 350 0 36 chr15 81648760 81648783 -21846191 + B4A SINE B4 66 85 -207 3 1207 487 227 10 0 chr15 81648783 81648880 -21846094 + B1F SINE Alu 1 98 -51 3 1207 230 293 126 18 chr15 81648918 81649085 -21845889 - L1M5 LINE L1 -243 5930 5746 3 1207 288 0 0 0 chr15 81649119 81649151 -21845823 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 3 1207 1145 41 0 7 chr15 81649152 81649299 -21845675 - B1_Mus1 SINE Alu -2 146 1 3 1207 1220 65 12 0 chr15 81649310 81649478 -21845496 - B2_Mm2 SINE B2 -24 171 2 3 1207 266 358 0 0 chr15 81649486 81649606 -21845368 - L1M5 LINE L1 -453 5720 5601 3 1207 845 158 0 0 chr15 81649661 81649794 -21845180 - B1_Mur3 SINE Alu -15 134 2 3 1207 736 258 25 50 chr15 81649798 81649974 -21845000 - B3 SINE B2 -6 210 36 3 1207 1314 71 27 6 chr15 81649974 81650157 -21844817 - B2_Mm2 SINE B2 -7 188 2 3 1207 736 289 15 94 chr15 81650157 81650196 -21844778 - B3 SINE B2 -156 37 4 3 1207 234 136 0 0 chr15 81650503 81650547 -21844427 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1207 246 32 0 0 chr15 81650547 81650578 -21844396 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 3 1207 234 244 0 0 chr15 81650701 81650746 -21844228 - MER20 DNA MER1_type -171 48 4 3 1207 288 342 6 68 chr15 81650987 81651150 -21843824 + MIRm SINE MIR 34 186 -90 3 1207 283 262 0 15 chr15 81651397 81651463 -21843511 + ID4 SINE ID 18 82 -1 3 1207 449 267 14 36 chr15 81651939 81652079 -21842895 + B4 SINE B4 13 149 -143 3 1207 361 112 0 43 chr15 81652398 81652491 -21842483 + T-rich Low_complexity Low_complexity 2 90 0 3 1207 1137 68 0 0 chr15 81652493 81652640 -21842334 - B1_Mus2 SINE Alu 0 147 1 3 1207 753 194 0 96 chr15 81652701 81652780 -21842194 - URR1B DNA MER1_type 0 225 157 3 1207 217 0 29 29 chr15 81652780 81652814 -21842160 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 1207 1068 67 0 0 chr15 81652814 81652949 -21842025 - B1_Mus2 SINE Alu -10 137 3 3 1207 753 194 0 96 chr15 81652949 81653045 -21841929 - URR1B DNA MER1_type -69 156 67 3 1207 829 157 0 28 chr15 81653019 81653163 -21841811 + B1_Mur3 SINE Alu 9 148 -1 3 1207 489 238 19 9 chr15 81653166 81653272 -21841702 - URR1B DNA MER1_type -118 107 1 3 1207 742 148 8 0 chr15 81653421 81653543 -21841431 + B1_Mur4 SINE Alu 7 129 -21 4 1207 200 267 17 0 chr15 81653561 81653621 -21841353 + GA-rich Low_complexity Low_complexity 2 62 0 4 1207 221 125 0 0 chr15 81657437 81657469 -21837505 + B1_Mus2 SINE Alu 79 110 -37 4 1207 1080 70 0 7 chr15 81657546 81657691 -21837283 - B1_Mus1 SINE Alu 0 148 5 4 150 626 288 6 29 chr15 81657725 81657897 -21837077 - B3A SINE B2 -4 194 27 4 1208 523 174 10 30 chr15 81657907 81658008 -21836966 - B1_Mus2 SINE Alu -1 146 48 4 1208 689 193 20 73 chr15 81658341 81658492 -21836482 + B1_Mur1 SINE Alu 7 149 0 4 1208 186 257 0 38 chr15 81658492 81658571 -21836403 + A-rich Low_complexity Low_complexity 2 76 0 4 1208 1125 54 0 0 chr15 81658571 81658718 -21836256 + B1_Mus2 SINE Alu 1 147 0 4 1208 186 257 0 38 chr15 81658718 81658743 -21836231 + A-rich Low_complexity Low_complexity 77 101 0 4 1208 243 0 0 0 chr15 81658772 81658799 -21836175 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 1208 333 337 0 0 chr15 81659220 81659315 -21835659 + MTE2b LTR MaLR 3 97 -282 4 1208 277 295 61 26 chr15 81659322 81659437 -21835537 + MTE2b LTR MaLR 64 182 -197 4 1208 588 227 15 15 chr15 81659438 81659572 -21835402 + RSINE1 SINE B4 3 136 -29 4 1208 402 78 330 28 chr15 81659626 81659732 -21835242 - B1_Mur2 SINE Alu -1 148 11 4 1208 356 0 23 0 chr15 81660126 81660170 -21834804 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1208 1975 162 45 47 chr15 81660212 81660660 -21834314 - RMER4A LTR ERVK 0 466 20 4 1208 724 41 57 16 chr15 81660660 81660783 -21834191 + (GAAA)n Simple_repeat Simple_repeat 1 128 0 4 1208 473 236 27 0 chr15 81660812 81660922 -21834052 - B1_Mur1 SINE Alu -36 113 1 4 1208 1065 68 14 7 chr15 81660953 81661100 -21833874 + B1_Mus1 SINE Alu 1 148 0 4 1208 180 0 0 0 chr15 81661100 81661120 -21833854 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1208 392 213 0 0 chr15 81661205 81661280 -21833694 - RSINE1 SINE B4 -78 87 13 4 1208 428 292 0 28 chr15 81661340 81661449 -21833525 - PB1 SINE Alu -2 125 20 4 1208 204 67 0 0 chr15 81662401 81662431 -21832543 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1208 1136 14 0 0 chr15 81662431 81662572 -21832402 - B1_Mm SINE Alu 0 147 7 4 1208 324 0 0 0 chr15 81662728 81662764 -21832210 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1208 190 287 10 112 chr15 81663231 81663282 -21831692 - MIR SINE MIR -56 206 160 4 1208 225 0 0 0 chr15 81663282 81663307 -21831667 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1208 264 281 0 0 chr15 81663308 81663372 -21831602 - ID4_ SINE ID -19 64 1 4 1208 190 287 10 112 chr15 81663372 81663416 -21831558 - MIR SINE MIR -103 159 119 4 1208 421 242 61 88 chr15 81663419 81663600 -21831374 + B2_Mm2 SINE B2 18 193 -2 4 1208 224 312 20 30 chr15 81664248 81664347 -21830627 - MIR SINE MIR -157 105 8 4 1208 581 171 0 26 chr15 81664374 81664488 -21830486 + PB1D9 SINE Alu 10 120 0 4 1208 229 246 0 0 chr15 81665308 81665365 -21829609 + C-rich Low_complexity Low_complexity 1 57 0 4 1208 219 69 0 0 chr15 81667424 81667453 -21827521 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 4 1208 436 162 0 51 chr15 81667797 81667875 -21827099 - PB1D9 SINE Alu -26 94 21 4 1208 283 268 0 0 chr15 81667871 81667927 -21827047 - B1F SINE Alu -37 112 57 4 1208 564 268 0 39 chr15 81668307 81668435 -21826539 + B3A SINE B2 1 123 -75 4 1208 306 348 61 41 chr15 81668435 81668454 -21826520 + B4 SINE B4 1 150 -142 4 1208 268 274 16 16 chr15 81668438 81668522 -21826452 + ID4 SINE ID 19 102 -50 4 1208 546 16 0 0 chr15 81668549 81668612 -21826362 + (GA)n Simple_repeat Simple_repeat 2 64 0 4 1208 718 102 0 0 chr15 81668626 81668724 -21826250 + B2_Mm2 SINE B2 47 144 -51 4 1208 1121 70 35 0 chr15 81668724 81668867 -21826107 + B1_Mus1 SINE Alu 1 148 0 4 1208 626 128 12 222 chr15 81668867 81668943 -21826031 + B2_Mm1t SINE B2 146 186 -7 4 1208 930 140 0 56 chr15 81668946 81669090 -21825884 + B1_Mus1 SINE Alu 5 140 -8 4 1208 222 37 0 0 chr15 81669090 81669117 -21825857 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1208 182 167 105 53 chr15 81669187 81669244 -21825730 + L2c LINE L2 3328 3387 0 4 1208 627 174 8 42 chr15 81669749 81669869 -21825105 + PB1D9 SINE Alu 5 120 0 4 1208 206 184 179 17 chr15 81669877 81669985 -21824989 - MIR SINE MIR -134 134 8 4 1208 195 311 62 62 chr15 81670635 81670731 -21824243 - MIRm SINE MIR -94 182 87 4 1208 1086 127 72 0 chr15 81670821 81670987 -21823987 + B2_Mm1t SINE B2 2 179 -14 4 1208 393 88 319 9 chr15 81671039 81671152 -21823822 + B2_Mm2 SINE B2 47 194 -1 4 1208 656 234 0 47 chr15 81671202 81671350 -21823624 - ID_B1 SINE B4 -3 221 81 4 1208 239 309 119 22 chr15 81671530 81671585 -21823389 - L1MD LINE L1 -241 5923 5858 4 1208 402 21 0 0 chr15 81671585 81671632 -21823342 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1208 274 277 83 24 chr15 81671632 81671761 -21823213 - L1MD LINE L1 -307 5857 5722 4 1208 877 137 21 21 chr15 81671772 81671914 -21823060 - B1_Mur2 SINE Alu -1 148 7 4 1208 516 226 26 0 chr15 81672008 81672123 -21822851 - B1F2 SINE Alu 0 149 32 4 1208 404 289 97 0 chr15 81672234 81672348 -21822626 - RSINE1 SINE B4 -16 149 25 4 1208 1118 111 25 55 chr15 81672377 81672552 -21822422 + B2_Mm2 SINE B2 2 166 -29 4 1208 1230 54 0 0 chr15 81672552 81672699 -21822275 + B1_Mm SINE Alu 1 147 0 4 1208 1118 111 25 55 chr15 81672699 81672723 -21822251 + B2_Mm2 SINE B2 167 195 0 4 1208 624 97 0 11 chr15 81673495 81673589 -21821385 + B2_Mm2 SINE B2 97 189 -6 4 1208 770 127 0 0 chr15 81673595 81673705 -21821269 + B1_Mus1 SINE Alu 3 112 -36 4 1208 180 77 0 0 chr15 81674201 81674227 -21820747 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 4 1208 29 60 0 0 chr15 81674229 81674279 -21820695 + AT_rich Low_complexity Low_complexity 1 50 0 4 1208 520 216 0 153 chr15 81674279 81674416 -21820558 - B1_Mur2 SINE Alu -21 128 13 4 1208 485 218 168 78 chr15 81674424 81674603 -21820371 - B3A SINE B2 -1 197 3 4 1208 507 195 352 0 chr15 81674615 81674774 -21820200 - B3 SINE B2 -1 215 1 4 1208 914 210 97 0 chr15 81674912 81675098 -21819876 - ID_B1 SINE B4 -20 204 1 4 1208 1061 52 82 0 chr15 81675165 81675300 -21819674 + B1_Mus2 SINE Alu 2 147 0 4 1208 839 187 0 74 chr15 81675383 81675545 -21819429 - B1_Mur4 SINE Alu 0 150 1 4 1208 233 204 243 28 chr15 81675910 81676028 -21818946 - MIR3 SINE MIR -25 183 47 4 1208 180 152 0 0 chr15 81676028 81676061 -21818913 + T-rich Low_complexity Low_complexity 1 33 0 4 1208 318 50 0 0 chr15 81676989 81677029 -21817945 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 4 1208 321 26 0 0 chr15 81677047 81677085 -21817889 + (TCC)n Simple_repeat Simple_repeat 2 39 0 4 1208 216 286 0 0 chr15 81677094 81677136 -21817838 - B3A SINE B2 -156 42 1 4 1208 801 171 13 20 chr15 81677619 81677768 -21817206 - B1_Mus1 SINE Alu 0 148 1 4 1208 243 309 183 0 chr15 81677959 81678102 -21816872 + MIR SINE MIR 58 230 -38 4 1208 27 49 0 0 chr15 81679328 81679369 -21815605 + AT_rich Low_complexity Low_complexity 1 41 0 4 1208 221 0 0 33 chr15 81680100 81680130 -21814844 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1208 338 305 45 32 chr15 81682436 81682459 -21812515 - B4A SINE B4 -58 234 129 4 1208 579 223 16 24 chr15 81682459 81682583 -21812391 - B1F2 SINE Alu -26 123 1 4 1208 1292 34 0 0 chr15 81683850 81683997 -21810977 - B1_Mus1 SINE Alu 0 148 2 4 1208 239 0 32 0 chr15 81684101 81684132 -21810842 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1208 666 183 32 24 chr15 81684384 81684507 -21810467 + B1_Mus1 SINE Alu 20 143 -5 4 1208 259 317 74 0 chr15 81684601 81684703 -21810271 + PB1D10 SINE Alu 3 116 -4 4 1208 1100 72 114 0 chr15 81684742 81684909 -21810065 + B2_Mm2 SINE B2 1 186 -9 4 1208 1298 97 6 0 chr15 81684915 81685090 -21809884 + B2_Mm2 SINE B2 1 176 -19 4 1208 711 282 46 2 chr15 81685101 81685301 -21809673 + B3A SINE B2 5 215 -1 4 1208 396 59 0 0 chr15 81686188 81686239 -21808735 + (GGAA)n Simple_repeat Simple_repeat 3 53 0 4 1208 180 217 20 80 chr15 81687778 81687828 -21807146 + L3 LINE CR1 1095 1141 -3348 4 1208 1173 51 0 0 chr15 81689917 81690054 -21804920 - B1_Mm SINE Alu -9 138 2 4 1208 790 201 172 11 chr15 81691717 81691903 -21803071 - B3 SINE B2 0 216 1 4 1208 270 81 0 0 chr15 81691945 81691982 -21802992 + (TCC)n Simple_repeat Simple_repeat 3 39 0 4 1208 1129 88 7 0 chr15 81691983 81692130 -21802844 - B1_Mus1 SINE Alu 0 148 1 4 1208 253 336 76 0 chr15 81692456 81692575 -21802399 + B1_Mur3 SINE Alu 10 137 -12 4 1208 1933 171 0 105 chr15 81692860 81693299 -21801675 - RMER10B LTR ERVL 0 398 6 4 1208 544 202 30 10 chr15 81693374 81693474 -21801500 - B3 SINE B2 -83 133 32 4 1208 643 268 19 7 chr15 81693470 81693624 -21801350 - B3A SINE B2 -42 156 1 4 1208 24 0 0 0 chr15 81693624 81693648 -21801326 + AT_rich Low_complexity Low_complexity 1 24 0 4 1208 841 208 0 0 chr15 81693648 81693792 -21801182 - B1_Mus2 SINE Alu -2 145 2 4 1208 303 326 84 37 chr15 81693961 81694152 -21800822 - B4 SINE B4 -67 225 26 4 1208 614 234 222 0 chr15 81695124 81695291 -21799683 + B3 SINE B2 1 204 -12 4 1208 375 262 93 9 chr15 81695445 81695553 -21799421 + PB1D7 SINE Alu 4 120 0 4 1208 305 175 70 0 chr15 81696497 81696554 -21798420 - B1_Mur4 SINE Alu -89 61 1 5 1208 296 195 115 13 chr15 81696554 81696568 -21798406 - B4 SINE B4 -137 131 70 5 1208 374 269 26 0 chr15 81696653 81696731 -21798243 - RSINE1 SINE B4 -83 82 3 5 1208 391 289 10 0 chr15 81697289 81697303 -21797671 - PB1D10 SINE Alu -19 98 85 5 1208 1070 109 7 0 chr15 81697303 81697450 -21797524 - B1_Mur4 SINE Alu -1 149 2 5 1208 391 289 10 0 chr15 81697450 81697532 -21797442 - PB1D10 SINE Alu -33 84 2 5 1208 867 170 21 0 chr15 81699123 81699264 -21795710 - B1_Mur3 SINE Alu -5 144 1 5 1208 509 250 17 43 chr15 81699526 81699643 -21795331 + B1F1 SINE Alu 25 138 -11 5 1208 341 274 40 50 chr15 81699687 81699787 -21795187 + PB1D10 SINE Alu 14 112 -5 5 1208 699 100 38 9 chr15 81699893 81700016 -21794958 + PB1D9 SINE Alu 19 149 0 5 1208 983 249 80 18 chr15 81700057 81700395 -21794579 + MTD LTR MaLR 5 419 0 5 1208 266 300 78 0 chr15 81700395 81700483 -21794491 + RSINE1 SINE B4 22 116 -49 5 1208 1015 96 37 0 chr15 81701359 81701494 -21793480 + B1_Mus1 SINE Alu 1 140 -8 5 1208 506 269 92 8 chr15 81701790 81701921 -21793053 - B1F SINE Alu -3 146 5 5 1208 230 260 25 38 chr15 81702655 81702735 -21792239 - ID_B1 SINE B4 -64 160 82 5 1208 23 0 0 0 chr15 81704079 81704102 -21790872 + AT_rich Low_complexity Low_complexity 1 23 0 5 1208 425 232 25 51 chr15 81704901 81705019 -21789955 - PB1D10 SINE Alu 0 117 3 5 1208 1088 183 4 92 chr15 81705079 81705308 -21789666 - B3 SINE B2 -4 212 4 5 1208 342 333 31 8 chr15 81705536 81705663 -21789311 + MIR SINE MIR 2 131 -131 5 1208 214 268 36 0 chr15 81706456 81706512 -21788462 + PB1 SINE Alu 1 58 -69 5 1208 891 198 115 0 chr15 81706577 81706769 -21788205 - B3 SINE B2 -2 214 1 5 1208 184 304 57 14 chr15 81706771 81706841 -21788133 - L2 LINE L2 -565 2854 2782 5 1208 252 242 0 0 chr15 81706978 81707044 -21787930 + T-rich Low_complexity Low_complexity 30 95 0 5 1208 1053 51 5 43 chr15 81707044 81707230 -21787744 + (TTC)n Simple_repeat Simple_repeat 2 180 0 5 1208 1116 68 13 20 chr15 81707235 81707384 -21787590 - B1_Mus1 SINE Alu 0 148 1 5 1208 252 242 0 0 chr15 81707384 81707406 -21787568 + T-rich Low_complexity Low_complexity 3 24 0 5 1208 624 224 64 0 chr15 81707452 81707577 -21787397 - RSINE1 SINE B4 -31 134 2 5 1208 207 325 132 0 chr15 81707794 81707877 -21787097 + MIRb SINE MIR 128 221 -47 5 1208 322 286 71 12 chr15 81708050 81708135 -21786839 + RSINE1 SINE B4 74 163 -2 5 1208 1367 90 0 26 chr15 81708197 81708390 -21786584 + B2_Mm2 SINE B2 2 189 -6 5 1208 560 208 0 40 chr15 81708397 81708522 -21786452 - PB1D9 SINE Alu 0 120 1 5 1208 239 72 0 23 chr15 81708536 81708579 -21786395 + (TATG)n Simple_repeat Simple_repeat 3 44 0 5 1208 523 265 118 39 chr15 81708579 81708732 -21786242 - B3 SINE B2 -50 166 2 5 1208 221 119 24 0 chr15 81708795 81708837 -21786137 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 5 1208 855 138 20 52 chr15 81708842 81708995 -21785979 - B1_Mus1 SINE Alu 0 148 1 5 1208 1192 82 0 0 chr15 81709014 81709161 -21785813 - B1_Mus1 SINE Alu 0 148 2 5 1208 713 206 36 29 chr15 81709171 81709311 -21785663 - B1_Mur2 SINE Alu -7 142 2 5 1208 645 125 10 0 chr15 81709653 81709749 -21785225 - B1_Mus2 SINE Alu -1 146 50 5 1208 256 314 20 122 chr15 81709760 81709956 -21785018 - MIR SINE MIR -56 206 31 5 1208 256 286 78 12 chr15 81710913 81711028 -21783946 - MIR SINE MIR -105 157 32 5 1208 296 235 60 36 chr15 81711409 81711493 -21783481 - PB1D7 SINE Alu -1 119 34 5 1208 311 288 51 59 chr15 81712321 81712439 -21782535 - LTR75 LTR ERVL -91 471 355 5 1208 303 270 87 87 chr15 81712452 81712602 -21782372 - LTR75 LTR ERVL -296 266 117 5 1208 231 415 20 7 chr15 81712740 81712888 -21782086 - L3 LINE CR1 -993 3496 3347 5 1208 469 244 103 7 chr15 81713356 81713492 -21781482 + B1F SINE Alu 1 149 0 5 1208 1430 78 21 0 chr15 81713495 81713686 -21781288 + B2_Mm2 SINE B2 1 195 0 5 1208 803 127 17 0 chr15 81713691 81713809 -21781165 + PB1D9 SINE Alu 1 120 0 5 1208 513 230 21 8 chr15 81713907 81714045 -21780929 + B1_Mur1 SINE Alu 2 144 -5 5 1208 187 329 35 35 chr15 81714302 81714387 -21780587 - MER5A DNA MER1_type -98 91 7 5 1208 480 303 16 0 chr15 81714482 81714604 -21780370 + RSINE1 SINE B4 20 143 -22 5 1208 204 40 0 0 chr15 81714816 81714841 -21780133 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 5 1208 506 275 48 34 chr15 81714873 81715020 -21779954 - ID_B1 SINE B4 -27 197 49 5 1208 214 247 205 13 chr15 81715189 81715267 -21779707 + MIRb SINE MIR 164 256 -12 5 1208 595 116 211 162 chr15 81715311 81715352 -21779622 + B2_Mm2 SINE B2 1 41 -154 5 1208 1263 87 35 0 chr15 81715352 81715524 -21779450 + B2_Mm1t SINE B2 2 179 -14 5 1208 595 116 211 162 chr15 81715524 81715667 -21779307 + B2_Mm2 SINE B2 42 194 -1 5 1208 996 108 31 25 chr15 81715663 81715824 -21779150 + B2_Mm2 SINE B2 27 188 -7 5 1208 715 232 26 7 chr15 81716067 81716219 -21778755 + RSINE1 SINE B4 3 157 -8 5 1208 467 274 41 41 chr15 81716228 81716350 -21778624 - RSINE1 SINE B4 -38 127 6 5 1208 444 174 252 0 chr15 81717168 81717283 -21777691 + B1F2 SINE Alu 3 146 -3 5 1208 1624 57 0 0 chr15 81717548 81717741 -21777233 - B2_Mm1a SINE B2 0 193 1 5 1208 1572 181 171 8 chr15 81718022 81718378 -21776596 + MTD LTR MaLR 6 419 0 5 1208 222 62 0 0 chr15 81718412 81718444 -21776530 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 1208 1167 82 13 0 chr15 81718445 81718604 -21776370 - B2_Mm2 SINE B2 -34 161 1 5 1208 492 268 68 51 chr15 81718667 81718844 -21776130 - MLT1F LTR MaLR -2 546 367 5 1208 274 196 214 0 chr15 81718838 81718894 -21776080 + ID4_ SINE ID 12 79 -4 5 1208 603 306 88 18 chr15 81718917 81719143 -21775831 - MLT1F LTR MaLR -186 362 121 5 1208 264 310 37 65 chr15 81719993 81720100 -21774874 + B1F2 SINE Alu 4 107 -42 5 1208 336 48 0 0 chr15 81720191 81720233 -21774741 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1208 703 223 0 44 chr15 81720234 81720370 -21774604 - RSINE1 SINE B4 -26 139 10 5 1208 963 223 56 10 chr15 81720376 81720571 -21774403 - ID_B1 SINE B4 -18 206 3 5 1208 1284 27 7 0 chr15 81720794 81720940 -21774034 - B1_Mm SINE Alu 0 147 1 5 1208 422 154 99 0 chr15 81720967 81721059 -21773915 + B1_Mur3 SINE Alu 13 114 -35 5 1208 285 295 0 69 chr15 81720987 81721089 -21773885 + MT2B LTR ERVL 198 292 -309 5 1208 370 335 92 29 chr15 81721255 81721461 -21773513 + MER20 DNA MER1_type 1 219 0 5 1208 244 276 0 0 chr15 81721569 81721627 -21773347 + Lx8 LINE L1 7078 7135 -338 5 1208 212 322 0 0 chr15 81721870 81721929 -21773045 - RSINE1 SINE B4 -104 61 3 5 1208 189 0 0 0 chr15 81722167 81722188 -21772786 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1208 1198 68 0 0 chr15 81722191 81722338 -21772636 - B1_Mus1 SINE Alu 0 148 2 5 1208 300 229 58 21 chr15 81722476 81722610 -21772364 + MIRc SINE MIR 22 173 -103 5 1208 456 231 248 13 chr15 81722639 81722788 -21772186 + B3A SINE B2 1 184 -14 5 1208 293 286 58 101 chr15 81723060 81723190 -21771784 - B1F1 SINE Alu -1 148 5 5 1208 286 315 33 11 chr15 81723261 81723351 -21771623 + B1F SINE Alu 20 111 -38 5 1208 216 0 0 0 chr15 81723376 81723400 -21771574 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1208 474 223 97 18 chr15 81723411 81723525 -21771449 + B3 SINE B2 1 123 -93 5 1208 995 61 0 0 chr15 81723530 81723662 -21771312 + B1_Mus1 SINE Alu 10 141 -7 5 1208 324 158 0 0 chr15 81723666 81723723 -21771251 + GA-rich Low_complexity Low_complexity 3 59 0 5 1208 336 255 48 48 chr15 81723723 81723826 -21771148 + B3 SINE B2 113 215 -1 5 1208 277 304 16 102 chr15 81723864 81723992 -21770982 + PB1D10 SINE Alu 1 117 0 5 1208 363 234 0 0 chr15 81723998 81724077 -21770897 + B1F SINE Alu 2 80 -70 5 1208 1389 105 11 0 chr15 81724094 81724284 -21770690 - B2_Mm1t SINE B2 0 193 2 5 1208 227 185 15 30 chr15 81725124 81725178 -21769796 + T-rich Low_complexity Low_complexity 15 67 0 5 1208 1234 61 0 0 chr15 81725178 81725325 -21769649 - B1_Mm SINE Alu 0 147 1 5 1208 227 185 15 30 chr15 81725325 81725337 -21769637 + T-rich Low_complexity Low_complexity 3 14 0 5 1208 440 296 17 9 chr15 81725338 81725454 -21769520 - ID_B1 SINE B4 0 224 108 5 1208 323 224 30 0 chr15 81725978 81726045 -21768929 - ID2 SINE ID -13 70 2 5 1208 460 179 149 9 chr15 81726201 81726308 -21768666 + B3A SINE B2 39 160 -38 5 1208 180 0 0 0 chr15 81726311 81726331 -21768643 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 1208 529 192 165 8 chr15 81726349 81726470 -21768504 + B1_Mus1 SINE Alu 8 147 -1 5 1208 362 360 31 35 chr15 81727395 81727605 -21767369 - L2b LINE L2 -1 3386 3193 5 1208 417 250 79 55 chr15 81727679 81727806 -21767168 + ID_B1 SINE B4 84 213 -11 5 1208 189 0 0 0 chr15 81727858 81727879 -21767095 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 5 1208 245 350 0 37 chr15 81728035 81728142 -21766832 - MLT1A1 LTR MaLR 0 408 306 5 1208 336 291 39 0 chr15 81730004 81730107 -21764867 + B3 SINE B2 110 216 0 5 1208 219 36 0 0 chr15 81730126 81730154 -21764820 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 5 1208 1209 48 0 7 chr15 81730154 81730292 -21764682 - B1_Mus2 SINE Alu -9 138 1 6 1208 34 0 0 0 chr15 81730298 81730332 -21764642 + AT_rich Low_complexity Low_complexity 1 34 0 6 1208 596 253 20 7 chr15 81730714 81730861 -21764113 + B1F SINE Alu 1 149 0 6 1208 505 258 0 40 chr15 81730864 81730989 -21763985 + PB1D9 SINE Alu 1 120 0 6 1208 2251 153 46 8 chr15 81731525 81731895 -21763079 - ORR1C2 LTR MaLR 0 384 1 6 1208 252 250 68 27 chr15 81732287 81732361 -21762613 + B1F SINE Alu 2 78 -71 6 1208 237 302 71 18 chr15 81733045 81733198 -21761776 - MIRb SINE MIR -69 199 32 6 1208 240 208 83 0 chr15 81733638 81733710 -21761264 - MIR SINE MIR -121 141 64 6 1208 798 76 17 0 chr15 81734619 81734737 -21760237 + B1_Mus2 SINE Alu 27 146 -1 6 1208 790 169 0 7 chr15 81735859 81735996 -21758978 + B1_Mus1 SINE Alu 9 144 -4 6 1208 182 250 89 0 chr15 81736863 81736919 -21758055 - MIRb SINE MIR -32 236 176 6 1208 1031 90 28 7 chr15 81737066 81737211 -21757763 - B1_Mur4 SINE Alu -2 148 1 6 1208 334 259 66 15 chr15 81737217 81737354 -21757620 - B1F SINE Alu -5 144 1 6 1208 1095 84 0 7 chr15 81737620 81737764 -21757210 + B1_Mus1 SINE Alu 1 143 -5 6 1208 1018 97 21 0 chr15 81738201 81738345 -21756629 - B1_Mus1 SINE Alu 0 148 2 6 1208 506 32 0 0 chr15 81738761 81738824 -21756150 - B2_Mm2 SINE B2 -131 64 2 6 1208 834 118 96 7 chr15 81738876 81739012 -21755962 + B1_Mus1 SINE Alu 1 148 0 6 1208 214 196 20 0 chr15 81739013 81739064 -21755910 + A-rich Low_complexity Low_complexity 5 56 0 6 1208 318 247 42 63 chr15 81739148 81739243 -21755731 + PB1D10 SINE Alu 14 106 -11 6 1208 213 39 0 0 chr15 81739244 81739270 -21755704 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 1208 1432 84 11 0 chr15 81739273 81739463 -21755511 + B2_Mm1a SINE B2 2 193 0 6 1208 1081 89 0 46 chr15 81739474 81739627 -21755347 + B1_Mus1 SINE Alu 3 148 0 6 1208 306 0 0 0 chr15 81739627 81739661 -21755313 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 6 1208 219 286 99 0 chr15 81741237 81741328 -21753646 + MIR SINE MIR 12 111 -151 6 1208 1204 59 125 34 chr15 81741775 81741951 -21753023 + B2_Mm2 SINE B2 1 192 -3 6 1208 430 244 0 0 chr15 81742042 81742128 -21752846 + B4A SINE B4 8 93 -199 6 1208 431 169 54 117 chr15 81742128 81742253 -21752721 + B2_Mm1t SINE B2 8 195 0 6 1208 438 225 28 47 chr15 81743730 81743862 -21751112 + B1_Mus1 SINE Alu 5 137 -12 6 1208 281 214 238 0 chr15 81745813 81745897 -21749077 + B1_Mus2 SINE Alu 10 113 -34 6 1208 316 293 0 0 chr15 81746580 81746662 -21748312 + BC1_Mm scRNA scRNA 9 90 -62 6 1208 507 295 109 5 chr15 81746682 81746866 -21748108 + ID_B1 SINE B4 6 208 -16 6 1208 721 85 147 0 chr15 81749888 81750017 -21744957 - URR1A DNA MER1_type 0 226 79 6 1208 1219 54 0 0 chr15 81750482 81750629 -21744345 + B1_Mus1 SINE Alu 2 148 0 6 1208 238 143 32 0 chr15 81750631 81750694 -21744280 + (TAAA)n Simple_repeat Simple_repeat 2 66 0 6 1208 840 158 72 0 chr15 81750717 81750856 -21744118 + B1_Mur3 SINE Alu 1 149 0 6 1208 243 179 71 0 chr15 81751084 81751140 -21743834 + RSINE1 SINE B4 3 62 -103 6 1208 235 333 65 0 chr15 81751874 81751982 -21742992 + MLT1H LTR MaLR 50 164 -385 6 1208 296 326 11 0 chr15 81752180 81752269 -21742705 - PB1D10 SINE Alu -24 93 4 6 1208 311 263 51 12 chr15 81752673 81752787 -21742187 - MIR SINE MIR -124 144 28 6 1208 1224 57 0 0 chr15 81753297 81753455 -21741519 + B2_Mm2 SINE B2 1 158 -37 6 1208 243 0 0 0 chr15 81753456 81753483 -21741491 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 6 1208 239 32 0 0 chr15 81753521 81753552 -21741422 + B2_Mm1t SINE B2 130 160 -33 6 1208 207 0 0 0 chr15 81753552 81753575 -21741399 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 6 1208 455 342 0 0 chr15 81753922 81754042 -21740932 + ID_B1 SINE B4 84 203 -21 6 1208 215 0 67 0 chr15 81754203 81754233 -21740741 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 6 1208 1212 226 139 6 chr15 81754238 81754576 -21740398 + ORR1C2 LTR MaLR 1 383 -1 6 1208 656 194 31 0 chr15 81754581 81754710 -21740264 + B1_Mur1 SINE Alu 12 144 -5 6 1208 188 239 239 0 chr15 81754939 81755027 -21739947 + L2a LINE L2 2974 3082 -337 6 1208 541 160 7 9 chr15 81755064 81755171 -21739803 + RLTR13D4 LTR ERVK 1 106 -1008 6 1208 268 312 12 0 chr15 81755441 81755521 -21739453 + RSINE1 SINE B4 2 82 -83 6 1208 226 333 107 9 chr15 81755558 81755670 -21739304 - MIRm SINE MIR -133 143 21 6 1208 902 113 0 14 chr15 81755767 81755911 -21739063 - B1_Mur4 SINE Alu 0 150 9 6 1208 397 284 0 25 chr15 81755926 81756045 -21738929 - PB1D10 SINE Alu 0 117 2 6 1208 401 250 27 63 chr15 81757093 81757186 -21737788 + PB1D7 SINE Alu 14 105 -15 6 1208 1245 54 0 0 chr15 81757186 81757333 -21737641 + B1_Mus1 SINE Alu 2 148 0 6 1208 401 250 27 63 chr15 81757333 81757350 -21737624 + PB1D7 SINE Alu 106 120 0 6 1208 231 255 0 0 chr15 81757358 81757405 -21737569 + ID_B1 SINE B4 161 207 -17 6 1208 851 167 0 0 chr15 81757457 81757595 -21737379 + B1_Mus1 SINE Alu 11 148 0 6 1208 461 241 7 63 chr15 81757609 81757751 -21737223 + B1_Mm SINE Alu 13 146 -1 6 1208 799 170 0 41 chr15 81757779 81757926 -21737048 + B1_Mur4 SINE Alu 2 142 -8 6 1208 300 250 69 35 chr15 81758036 81758074 -21736900 - B2_Mm2 SINE B2 -23 172 127 6 1208 270 0 0 0 chr15 81758074 81758104 -21736870 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1208 360 0 0 0 chr15 81758104 81758143 -21736831 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 1208 306 172 148 28 chr15 81758143 81758219 -21736755 - B3 SINE B2 -81 135 54 6 1208 195 238 30 60 chr15 81758419 81758486 -21736488 - MIRc SINE MIR -182 86 22 6 1208 681 47 0 0 chr15 81758546 81758631 -21736343 + (GAAA)n Simple_repeat Simple_repeat 2 86 0 6 1208 205 306 44 44 chr15 81758711 81758824 -21736150 + L2a LINE L2 3313 3425 -1 6 1208 997 53 250 39 chr15 81759234 81759390 -21735584 + B2_Mm2 SINE B2 2 190 -5 6 1208 312 250 34 51 chr15 81759433 81759551 -21735423 + PB1 SINE Alu 10 125 -2 6 1208 772 199 14 0 chr15 81759557 81759703 -21735271 + B1_Mur3 SINE Alu 2 149 0 6 1208 242 338 0 0 chr15 81759710 81759787 -21735187 + ID_B1 SINE B4 81 157 -67 6 1208 217 343 27 36 chr15 81759715 81759827 -21735147 + PB1D10 SINE Alu 5 115 -2 6 1208 1125 65 0 0 chr15 81759886 81760024 -21734950 - B1_Mus2 SINE Alu -9 138 1 6 1208 195 328 90 49 chr15 81760062 81760077 -21734897 + L2 LINE L2 1803 1815 -1604 6 1208 1477 70 16 0 chr15 81760077 81760264 -21734710 + B2_Mm2 SINE B2 1 190 -5 6 1208 195 328 90 49 chr15 81760264 81760370 -21734604 + L2 LINE L2 1816 1929 -1490 6 1208 625 227 7 57 chr15 81760373 81760513 -21734461 - ID_B1 SINE B4 0 224 92 6 1208 385 206 99 36 chr15 81760542 81760653 -21734321 + PB1D7 SINE Alu 2 119 -1 6 1208 2238 183 17 134 chr15 81760741 81761339 -21733635 - RLTR24 LTR ERV1 0 529 2 6 1208 383 217 0 71 chr15 81761617 81761716 -21733258 + B4 SINE B4 48 139 -153 6 1208 234 0 0 158 chr15 81761718 81761832 -21733142 + (CAGAG)n Simple_repeat Simple_repeat 5 100 0 6 1208 605 115 19 0 chr15 81761835 81761939 -21733035 + B1_Mus2 SINE Alu 42 147 0 6 1208 389 228 184 40 chr15 81761943 81762001 -21732973 + RLTR42-int LTR ERVK 1254 1315 -4207 6 1208 405 0 0 0 chr15 81762001 81762046 -21732928 + (GA)n Simple_repeat Simple_repeat 1 45 0 6 1208 389 228 184 40 chr15 81762046 81762079 -21732895 + RLTR42-int LTR ERVK 1316 1355 -4167 6 1208 1342 90 21 0 chr15 81762079 81762267 -21732707 - B2_Mm1t SINE B2 -1 192 1 6 1208 389 228 184 40 chr15 81762267 81762348 -21732626 + RLTR42-int LTR ERVK 1356 1451 -4071 6 1208 351 198 31 0 chr15 81762444 81762540 -21732434 + B1_Mus2 SINE Alu 49 147 0 6 1208 471 257 26 44 chr15 81762872 81762986 -21731988 - PB1D10 SINE Alu 0 117 6 6 1208 492 241 34 41 chr15 81763052 81763199 -21731775 - B1F SINE Alu -1 148 3 6 1208 339 178 13 40 chr15 81764162 81764238 -21730736 + B1F SINE Alu 42 115 -34 6 1208 314 276 131 10 chr15 81764363 81764462 -21730512 + ID_B1 SINE B4 93 203 -21 6 1208 446 270 0 10 chr15 81764475 81764576 -21730398 + PB1D10 SINE Alu 13 112 -5 6 1208 345 299 0 107 chr15 81764759 81764789 -21730185 + MT2B LTR ERVL 141 156 -445 6 1208 691 229 28 0 chr15 81764789 81764933 -21730041 + B1_Mur1 SINE Alu 2 149 0 6 1208 353 217 0 124 chr15 81765109 81765128 -21729846 + MT2B LTR ERVL 151 256 -345 6 1208 638 157 0 0 chr15 81765128 81765230 -21729744 + B1_Mur4 SINE Alu 3 104 -46 6 1208 334 302 78 56 chr15 81765327 81765506 -21729468 - B3A SINE B2 0 198 16 6 1208 343 231 91 19 chr15 81765524 81765639 -21729335 - PB1D7 SINE Alu 0 120 1 6 1208 927 172 192 11 chr15 81765667 81765849 -21729125 - B3 SINE B2 -1 215 1 6 1208 310 295 28 9 chr15 81765880 81765986 -21728988 - PB1D10 SINE Alu -1 116 9 6 1208 1247 41 7 0 chr15 81766260 81766407 -21728567 - B1_Mus1 SINE Alu 0 148 1 6 1208 417 70 0 0 chr15 81766555 81766612 -21728362 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1208 228 35 0 0 chr15 81767215 81767244 -21727730 + (TGAG)n Simple_repeat Simple_repeat 4 32 0 6 1208 320 0 25 0 chr15 81767263 81767303 -21727671 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1208 230 133 0 62 chr15 81768436 81768484 -21726490 + G-rich Low_complexity Low_complexity 4 48 0 6 1208 203 336 61 9 chr15 81769167 81769281 -21725693 - MIR3 SINE MIR -88 120 1 7 1208 456 19 0 0 chr15 81769393 81769446 -21725528 + (CA)n Simple_repeat Simple_repeat 1 53 0 7 1208 193 340 71 20 chr15 81769748 81769847 -21725127 - MIR SINE MIR -142 126 23 7 1208 347 328 8 8 chr15 81769978 81770095 -21724879 + MIR SINE MIR 76 192 -70 7 1208 181 231 75 19 chr15 81770396 81770449 -21724525 - MIR SINE MIR -68 140 85 7 1208 1028 69 7 0 chr15 81770571 81770715 -21724259 - B1_Mur4 SINE Alu 0 150 6 7 1208 402 321 22 0 chr15 81770978 81771027 -21723947 + ID SINE ID 32 83 -141 7 1208 241 265 80 20 chr15 81771027 81771127 -21723847 + PB1D10 SINE Alu 1 106 -11 7 1208 733 271 18 0 chr15 81771521 81771687 -21723287 + B3A SINE B2 4 172 -26 7 1208 808 159 0 0 chr15 81771759 81771895 -21723079 - B1_Mur3 SINE Alu 0 149 14 7 1208 286 51 0 0 chr15 81771895 81771934 -21723040 + B2_Mm2 SINE B2 4 42 -153 7 1208 563 67 0 0 chr15 81771934 81772009 -21722965 + B1_Mus2 SINE Alu 2 76 -71 7 1208 936 100 26 20 chr15 81772010 81772163 -21722811 + B2_Mm2 SINE B2 42 195 0 7 1208 1212 21 21 0 chr15 81772296 81772439 -21722535 + B1_Mm SINE Alu 2 147 0 7 1208 429 282 174 52 chr15 81772473 81772645 -21722329 + B3A SINE B2 5 197 -1 7 1208 352 312 64 0 chr15 81772680 81772805 -21722169 + B1F SINE Alu 1 133 -16 7 1208 916 249 52 52 chr15 81772839 81773105 -21721869 + B4A SINE B4 5 272 -20 7 1208 207 0 0 0 chr15 81773105 81773128 -21721846 + (CCCCCA)n Simple_repeat Simple_repeat 4 26 0 7 1208 916 249 52 52 chr15 81773128 81773149 -21721825 + B4A SINE B4 273 292 0 7 1208 205 89 44 0 chr15 81773156 81773201 -21721773 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 7 1208 564 277 0 0 chr15 81773311 81773488 -21721486 + C-rich Low_complexity Low_complexity 1 177 0 7 1208 1307 65 95 0 chr15 81774356 81774525 -21720449 - B2_Mm2 SINE B2 -10 185 1 7 1208 550 237 16 140 chr15 81774751 81775001 -21719973 + ID_B1 SINE B4 6 224 0 7 1208 810 52 8 42 chr15 81774885 81775005 -21719969 + B1_Mus1 SINE Alu 32 147 -1 7 1208 676 161 54 0 chr15 81775023 81775153 -21719821 + B1_Mur3 SINE Alu 13 149 0 7 1208 840 147 14 29 chr15 81775183 81775323 -21719651 + B1_Mur2 SINE Alu 5 142 -7 7 1208 392 202 165 7 chr15 81775501 81775650 -21719324 - MIRc SINE MIR -66 202 30 7 1208 349 211 0 14 chr15 81776009 81776081 -21718893 - ID4 SINE ID -11 72 2 7 1208 267 271 63 6 chr15 81776457 81776568 -21718406 - B1_Mur4 SINE Alu -9 138 26 7 1208 361 217 12 35 chr15 81776490 81776576 -21718398 - ID_B1 SINE B4 -39 185 102 7 1208 240 35 0 0 chr15 81776592 81776621 -21718353 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 1208 800 142 0 28 chr15 81776654 81776799 -21718175 - B1_Mur3 SINE Alu 0 149 9 7 1208 450 253 0 115 chr15 81776656 81776821 -21718153 - ID_B1 SINE B4 0 224 79 7 1208 281 128 0 21 chr15 81777476 81777524 -21717450 - RMER10A LTR ERVL -395 47 1 7 1208 1101 109 103 0 chr15 81777580 81777754 -21717220 - B2_Mm2 SINE B2 -2 193 2 7 1208 1278 79 90 0 chr15 81777846 81778024 -21716950 + B2_Mm2 SINE B2 1 194 -1 7 1208 339 25 0 0 chr15 81778247 81778287 -21716687 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1208 358 290 153 95 chr15 81778288 81778425 -21716549 - RSINE1 SINE B4 -20 145 1 7 1208 271 231 15 15 chr15 81778425 81778491 -21716483 - PB1D7 SINE Alu -3 117 52 7 1208 329 218 39 0 chr15 81778690 81778768 -21716206 - ID2 SINE ID -2 81 1 7 1208 240 303 94 25 chr15 81782163 81782281 -21712693 + MIRc SINE MIR 35 163 -113 7 1208 506 269 31 69 chr15 81782559 81782719 -21712255 - ID_B1 SINE B4 -1 223 70 7 1208 306 266 13 0 chr15 81783497 81783576 -21711398 + MIRc SINE MIR 52 131 -137 7 1208 1279 34 7 0 chr15 81783862 81784009 -21710965 - B1_Mus1 SINE Alu 0 148 1 7 1208 1200 47 0 20 chr15 81784356 81784507 -21710467 - B1_Mus1 SINE Alu 0 148 1 7 1208 316 254 81 0 chr15 81784665 81784755 -21710219 + MIRc SINE MIR 67 165 -103 7 1208 314 304 51 0 chr15 81785267 81785346 -21709628 + PB1D10 SINE Alu 1 83 -34 7 1208 1356 64 36 21 chr15 81785392 81785584 -21709390 + B2_Mm2 SINE B2 1 195 0 7 1208 210 224 138 0 chr15 81786004 81786062 -21708912 - MIRc SINE MIR -120 148 83 7 1208 546 149 226 24 chr15 81786291 81786415 -21708559 + B1_Mur4 SINE Alu 2 150 0 7 1208 341 230 27 13 chr15 81786468 81786543 -21708431 + ID4_ SINE ID 6 81 -2 7 1208 263 361 0 44 chr15 81787471 81787584 -21707390 + ID_B1 SINE B4 59 166 -58 7 1208 386 304 25 74 chr15 81787501 81787622 -21707352 + PB1D7 SINE Alu 6 120 0 7 1208 541 246 71 14 chr15 81787622 81787762 -21707212 + B1F2 SINE Alu 1 148 -1 7 1208 787 212 62 0 chr15 81787762 81787908 -21707066 + RSINE1 SINE B4 1 155 -10 7 1208 199 263 17 17 chr15 81788109 81788167 -21706807 + L2b LINE L2 3302 3359 -16 7 1208 1386 78 0 50 chr15 81788718 81788919 -21706055 + B2_Mm2 SINE B2 2 192 -3 7 1209 1214 61 0 0 chr15 81789883 81790030 -21704944 + B1_Mus1 SINE Alu 2 148 0 7 1209 25 0 0 0 chr15 81791293 81791318 -21703656 + GC_rich Low_complexity Low_complexity 1 25 0 7 1209 312 171 320 0 chr15 81791660 81791761 -21703213 + B1F2 SINE Alu 1 137 -11 7 1209 259 200 0 20 chr15 81791761 81791812 -21703162 - B1_Mus2 SINE Alu 0 147 98 7 1209 201 322 0 0 chr15 81791829 81791888 -21703086 + GA-rich Low_complexity Low_complexity 2 60 0 7 1209 537 262 12 80 chr15 81792025 81792187 -21702787 - B3A SINE B2 -7 191 41 7 1209 603 234 9 0 chr15 81792183 81792294 -21702680 - B3A SINE B2 -55 143 32 7 1209 1050 66 0 0 chr15 81792291 81792427 -21702547 + B1_Mus2 SINE Alu 12 147 0 7 1209 218 250 0 0 chr15 81792506 81792562 -21702412 + GA-rich Low_complexity Low_complexity 1 56 0 7 1209 1164 60 124 18 chr15 81792593 81792762 -21702212 - B2_Mm2 SINE B2 -8 187 1 7 1209 318 88 0 34 chr15 81792772 81792831 -21702143 - B2_Mm1t SINE B2 0 193 137 7 1209 1077 102 0 39 chr15 81792862 81793015 -21701959 - B1_Mus1 SINE Alu 0 148 2 7 1209 1205 76 0 0 chr15 81793047 81793192 -21701782 - B1_Mm SINE Alu 0 147 3 7 1209 323 304 52 129 chr15 81793229 81793384 -21701590 - RSINE1 SINE B4 0 165 23 7 1209 882 205 14 52 chr15 81793454 81793665 -21701309 + B3 SINE B2 1 203 -13 7 1209 630 26 0 0 chr15 81793668 81793744 -21701230 + (GAAAA)n Simple_repeat Simple_repeat 5 80 0 7 1209 804 170 6 64 chr15 81793749 81793906 -21701068 + B1_Mur4 SINE Alu 1 148 -2 7 1209 816 169 71 5 chr15 81793936 81794120 -21700854 + MERVL_2A-int LTR ERVL 5476 5671 -90 7 1209 1663 16 21 0 chr15 81794260 81794448 -21700526 + B2_Mm1a SINE B2 2 193 0 7 1209 1127 102 0 0 chr15 81794466 81794613 -21700361 + B1_Mus2 SINE Alu 1 147 0 7 1209 234 0 0 0 chr15 81794623 81794649 -21700325 + (A)n Simple_repeat Simple_repeat 1 26 0 7 1209 262 275 208 38 chr15 81794673 81794779 -21700195 + B1F SINE Alu 11 134 -15 7 1209 1402 219 45 88 chr15 81794855 81795133 -21699841 + RMER16 LTR ERVK 1 351 -182 7 1209 1141 57 0 21 chr15 81795133 81795276 -21699698 + B1_Mm SINE Alu 2 141 -6 7 1209 279 0 0 0 chr15 81795279 81795310 -21699664 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 1209 1402 212 51 83 chr15 81795310 81795494 -21699480 + RMER16 LTR ERVK 352 530 -3 7 1209 1218 119 11 0 chr15 81795878 81796054 -21698920 + B2_Mm1t SINE B2 2 179 -14 7 1209 335 97 402 80 chr15 81796086 81796198 -21698776 + B2_Mm2 SINE B2 47 194 -1 7 1209 234 210 0 101 chr15 81796263 81796332 -21698642 + B1_Mur2 SINE Alu 87 148 -1 7 1209 486 250 108 117 chr15 81796391 81796465 -21698509 + ID_B1 SINE B4 14 223 -68 7 1209 951 97 0 29 chr15 81796465 81796603 -21698371 + B1_Mur3 SINE Alu 14 147 -2 7 1209 180 77 0 0 chr15 81796780 81796806 -21698168 + (C)n Simple_repeat Simple_repeat 1 26 0 7 1209 432 0 0 0 chr15 81798040 81798088 -21696886 + (TC)n Simple_repeat Simple_repeat 1 48 0 7 1209 396 0 0 0 chr15 81798088 81798131 -21696843 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1209 2377 129 21 92 chr15 81798232 81798666 -21696308 + RLTR9D LTR ERVK 1 403 0 7 1209 620 165 222 63 chr15 81799063 81799169 -21695805 - RLTR25A LTR ERVK -32 1071 963 7 1209 216 0 0 0 chr15 81799169 81799193 -21695781 + (TC)n Simple_repeat Simple_repeat 2 25 0 7 1209 225 0 0 0 chr15 81799193 81799217 -21695757 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 1209 620 165 222 63 chr15 81799217 81799316 -21695658 - RLTR25A LTR ERVK -141 962 833 7 1209 240 213 219 21 chr15 81799419 81799515 -21695459 - RLTR25A LTR ERVK -174 854 740 7 1209 1125 204 53 77 chr15 81799516 81799868 -21695106 - RLTRETN_Mm LTR ERVK -1 408 1 7 1209 450 107 25 74 chr15 81799868 81799949 -21695025 - ETnERV2-int LTR ERVK -1 7405 7329 7 1209 585 251 270 3 chr15 81799949 81800249 -21694725 - RLTR13D6 LTR ERVK -365 537 158 7 1209 6286 137 40 44 chr15 81800249 81801336 -21693638 - ETnERV2-int LTR ERVK -198 7208 6127 7 1209 4912 170 25 18 chr15 81801305 81802802 -21692172 - ETnERV2-int LTR ERVK -3321 4085 2356 7 1209 24 0 0 0 chr15 81803321 81803345 -21691629 + AT_rich Low_complexity Low_complexity 1 24 0 7 1209 1091 142 29 14 chr15 81803345 81803552 -21691422 - ETnERV2-int LTR ERVK -3756 3650 3441 7 1209 2438 118 73 57 chr15 81803783 81804417 -21690557 - ETnERV2-int LTR ERVK -2657 2187 1731 7 1209 5928 126 14 91 chr15 81804439 81805597 -21689377 - ETnERV2-int LTR ERVK -3714 1130 66 7 1209 2216 132 3 3 chr15 81805597 81805908 -21689066 - RLTR10E LTR ERVK 0 311 1 7 1209 5928 126 14 91 chr15 81805908 81805971 -21689003 - ETnERV2-int LTR ERVK -4779 65 3 7 1209 1108 174 76 87 chr15 81805975 81806324 -21688650 - RLTRETN_Mm LTR ERVK 0 409 1 7 1209 1247 194 441 27 chr15 81806327 81806632 -21688342 - RLTR25A LTR ERVK -286 817 362 7 1209 1170 82 0 0 chr15 81806632 81806778 -21688196 - B1_Mus1 SINE Alu 0 148 3 7 1209 1247 239 137 49 chr15 81806778 81806856 -21688118 - RLTR25A LTR ERVK -742 361 299 7 1209 1247 111 16 21 chr15 81806856 81807050 -21687924 - B2_Mm1a SINE B2 0 193 1 7 1209 1247 239 137 49 chr15 81807050 81807247 -21687727 - RLTR25A LTR ERVK -805 298 85 7 1209 354 289 74 8 chr15 81807343 81807465 -21687509 + B1F SINE Alu 5 134 -15 8 1209 1211 100 0 6 chr15 81807521 81807692 -21687282 - B2_Mm2 SINE B2 -15 180 11 8 1209 3341 124 123 100 chr15 81807707 81807813 -21687161 - RMER6A LTR ERVK -2 754 651 8 1209 1384 90 37 0 chr15 81807813 81808001 -21686973 - B2_Mm2 SINE B2 0 195 1 8 1209 3341 124 123 100 chr15 81808001 81808355 -21686619 - RMER6A LTR ERVK -106 650 319 8 1209 1157 68 7 0 chr15 81808355 81808501 -21686473 - B1_Mm SINE Alu 0 147 1 8 1209 3341 124 123 100 chr15 81808501 81808776 -21686198 - RMER6A LTR ERVK -438 318 1 8 1209 322 318 142 32 chr15 81808952 81809261 -21685713 - MER77 LTR ERVL -221 386 44 8 1209 389 338 28 7 chr15 81809757 81809900 -21685074 + MER44D DNA MER2_type 30 175 -530 8 1209 1091 139 52 0 chr15 81809969 81810141 -21684833 + B2_Mm2 SINE B2 1 181 -14 8 1209 1356 62 16 33 chr15 81810223 81810407 -21684567 - B2_Mm2 SINE B2 -14 181 1 8 1209 21 36 0 0 chr15 81810420 81810448 -21684526 + AT_rich Low_complexity Low_complexity 1 28 0 8 1209 401 294 152 0 chr15 81810500 81810701 -21684273 + MER44D DNA MER2_type 360 591 -114 8 1209 354 243 15 51 chr15 81810701 81810824 -21684150 + B3 SINE B2 1 119 -76 8 1209 315 248 274 34 chr15 81812060 81812206 -21682768 - B3A SINE B2 -15 183 3 8 1209 1076 76 111 100 chr15 81812223 81812374 -21682600 - B2_Mm2 SINE B2 0 195 41 8 1209 1514 59 37 0 chr15 81812374 81812561 -21682413 - B2_Mm2 SINE B2 0 195 2 8 1209 1076 76 111 100 chr15 81812561 81812599 -21682375 - B2_Mm2 SINE B2 -155 40 4 8 1209 245 120 100 0 chr15 81813432 81813482 -21681492 - B2_Mm1t SINE B2 -1 192 138 8 1209 271 160 100 0 chr15 81813481 81813531 -21681443 - B2_Mm2 SINE B2 -94 101 47 8 1209 1142 92 18 6 chr15 81813584 81813748 -21681226 - B2_Mm2 SINE B2 -28 167 2 8 1209 654 101 0 0 chr15 81813806 81813895 -21681079 - B1_Mus2 SINE Alu 0 147 59 8 1209 2257 142 26 88 chr15 81813895 81814423 -21680551 - RLTR1B LTR ERV1 0 512 1 8 1209 562 72 43 16 chr15 81814425 81814521 -21680453 + B2_Mm2 SINE B2 33 125 -68 8 1209 1150 82 0 7 chr15 81814551 81814699 -21680275 - B1_Mus2 SINE Alu 0 147 1 8 1209 956 79 16 16 chr15 81814759 81814887 -21680087 + B1_Mus1 SINE Alu 2 129 -19 8 1209 672 197 50 137 chr15 81815012 81815046 -21679928 + RLTR19-int LTR ERVK 3812 3847 -2290 8 1209 1940 129 11 69 chr15 81815046 81815395 -21679579 - ORR1A4 LTR MaLR 0 329 1 8 1209 672 202 60 134 chr15 81815395 81815629 -21679345 + RLTR19-int LTR ERVK 3848 4031 -2106 8 1209 1330 187 57 79 chr15 81815652 81816006 -21678968 + RLTR19-int LTR ERVK 4036 4381 -1756 8 1209 1890 204 13 13 chr15 81816470 81816848 -21678126 + RLTR11A2 LTR ERVK 150 527 0 8 1209 584 35 0 54 chr15 81817131 81817222 -21677752 + B1_Mur4 SINE Alu 37 150 0 8 1209 242 303 0 193 chr15 81817144 81817279 -21677695 + B4 SINE B4 165 273 -19 8 1209 239 71 24 0 chr15 81817667 81817709 -21677265 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 8 1209 1052 75 8 0 chr15 81817709 81817843 -21677131 - B1_Mus1 SINE Alu -9 139 5 8 1209 217 346 86 9 chr15 81817918 81818023 -21676951 - PB1D10 SINE Alu 0 117 5 8 1209 741 216 0 51 chr15 81818506 81818662 -21676312 + B1_Mur2 SINE Alu 2 149 0 8 1209 719 229 132 5 chr15 81818693 81818882 -21676092 - B3 SINE B2 -2 214 2 8 1209 1039 103 14 14 chr15 81818963 81819111 -21675863 - B1_Mus1 SINE Alu 0 148 1 8 1209 286 330 7 57 chr15 81820521 81820629 -21674345 - B1F SINE Alu -1 119 14 8 1209 1085 108 0 0 chr15 81820800 81820948 -21674026 - B2_Mm2 SINE B2 -47 148 1 8 1209 1071 59 73 0 chr15 81821458 81821594 -21673380 - B1_Mus1 SINE Alu -1 147 2 8 1209 186 227 187 0 chr15 81821988 81822063 -21672911 + MIR SINE MIR 112 200 -62 8 1209 294 254 131 66 chr15 81825383 81825413 -21669561 - B4 SINE B4 -69 223 94 8 1209 553 167 0 22 chr15 81825413 81825505 -21669469 - B1_Mur2 SINE Alu -51 98 9 8 1209 399 315 237 10 chr15 81825527 81825928 -21669046 - Lx8 LINE L1 -7 7466 6975 8 1209 237 235 46 69 chr15 81826031 81826118 -21668856 + MLT1A1 LTR MaLR 2 86 -322 8 1209 505 248 0 27 chr15 81826515 81826627 -21668347 - ID_B1 SINE B4 -35 189 81 8 1209 1190 56 7 0 chr15 81826751 81826895 -21668079 + B1_Mus2 SINE Alu 1 145 -2 8 1209 189 74 0 0 chr15 81826895 81826922 -21668052 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 1209 553 237 18 0 chr15 81827079 81827207 -21667767 + B1_Mur1 SINE Alu 12 142 -7 8 1209 415 262 22 71 chr15 81827317 81827474 -21667500 - B1F SINE Alu -22 127 7 8 1209 315 247 54 33 chr15 81828392 81828484 -21666490 - ID_B1 SINE B4 -2 222 129 8 1209 180 274 51 64 chr15 81828714 81828792 -21666182 - L2 LINE L2 -3241 178 102 8 1209 544 270 66 61 chr15 81828953 81829166 -21665808 - B3 SINE B2 -2 214 1 8 1209 296 347 39 46 chr15 81829199 81829329 -21665645 - RSINE1 SINE B4 -31 134 6 8 1209 883 262 4 31 chr15 81829340 81829568 -21665406 - ID_B1 SINE B4 0 224 3 8 1209 363 234 60 43 chr15 81830081 81830197 -21664777 - BC1_Mm scRNA scRNA -31 121 4 8 1209 382 247 186 0 chr15 81830267 81830364 -21664610 - PB1D9 SINE Alu -5 115 1 8 1209 1026 128 0 7 chr15 81830588 81830737 -21664237 + B1_Mur3 SINE Alu 1 148 -1 8 1209 254 373 58 80 chr15 81831060 81831334 -21663640 - L2b LINE L2 -1 3374 3107 8 1209 266 0 0 29 chr15 81831546 81831581 -21663393 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 1209 680 143 71 0 chr15 81831608 81831720 -21663254 + B1_Mur2 SINE Alu 5 124 -25 8 1209 360 236 0 0 chr15 81831716 81831788 -21663186 + ID_B1 SINE B4 107 178 -46 8 1209 460 271 13 108 chr15 81832009 81832166 -21662808 + ID_B1 SINE B4 83 224 0 8 1209 273 341 11 11 chr15 81832354 81832446 -21662528 - RSINE1 SINE B4 -43 122 31 8 1209 453 262 46 9 chr15 81832485 81832593 -21662381 - ID_B1 SINE B4 -8 216 105 8 1209 479 147 0 31 chr15 81832610 81832708 -21662266 + T-rich Low_complexity Low_complexity 3 97 0 8 1209 665 201 33 59 chr15 81832708 81832861 -21662113 - B1_Mur2 SINE Alu 0 149 1 8 1209 342 286 161 52 chr15 81833188 81833380 -21661594 - MER2 DNA MER2_type -16 329 117 8 1209 392 224 162 10 chr15 81833519 81833618 -21661356 + B3 SINE B2 98 211 -5 8 1209 231 262 0 0 chr15 81833628 81833670 -21661304 + B1_Mur4 SINE Alu 8 49 -101 8 1209 1470 78 10 0 chr15 81833675 81833868 -21661106 + B2_Mm2 SINE B2 1 195 0 8 1209 723 136 0 18 chr15 81833913 81834025 -21660949 + B1_Mur4 SINE Alu 33 142 -8 8 1209 324 292 240 32 chr15 81834727 81835035 -21659939 - L2c LINE L2 -80 3346 2975 8 1209 25 31 0 0 chr15 81835081 81835113 -21659861 + AT_rich Low_complexity Low_complexity 1 32 0 8 1209 797 187 235 0 chr15 81835113 81835279 -21659695 - B3 SINE B2 -10 206 2 8 1209 626 294 22 0 chr15 81835306 81835442 -21659532 - RSINE1 SINE B4 -24 141 3 8 1209 364 223 0 56 chr15 81835458 81835545 -21659429 - ID4 SINE ID -66 86 10 8 1209 266 222 19 0 chr15 81835560 81835614 -21659360 - B1F SINE Alu -55 94 40 8 1209 929 261 26 0 chr15 81835642 81835837 -21659137 - B4A SINE B4 -6 286 87 8 1209 540 250 45 91 chr15 81835835 81836011 -21658963 + B3A SINE B2 31 198 0 8 1209 465 274 39 58 chr15 81836040 81836195 -21658779 + RSINE1 SINE B4 3 154 -11 8 1209 1086 70 0 40 chr15 81836217 81836367 -21658607 + B1_Mus1 SINE Alu 2 145 -3 8 1209 252 86 0 0 chr15 81836367 81836402 -21658572 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 8 1209 633 219 25 8 chr15 81836445 81836565 -21658409 + ID_B1 SINE B4 88 209 -15 8 1209 294 257 17 45 chr15 81836689 81836868 -21658106 + (CAGA)n Simple_repeat Simple_repeat 3 176 0 8 1209 1498 78 0 0 chr15 81837051 81837243 -21657731 - B2_Mm1t SINE B2 -1 192 1 8 1209 640 174 9 0 chr15 81837247 81837362 -21657612 - PB1D9 SINE Alu -1 119 4 8 1209 291 270 32 0 chr15 81837392 81837455 -21657519 - tRNA-Ala-GCY_ tRNA tRNA -8 67 3 8 1209 808 274 17 52 chr15 81837476 81837707 -21657267 - ID_B1 SINE B4 0 224 2 8 1209 290 229 0 41 chr15 81838750 81838823 -21656151 + ID4_ SINE ID 4 73 -10 8 1209 408 296 71 0 chr15 81838928 81839026 -21655948 + PB1D7 SINE Alu 1 105 -15 8 1209 558 155 0 0 chr15 81839142 81839239 -21655735 + (CAA)n Simple_repeat Simple_repeat 3 99 0 8 1209 657 173 267 5 chr15 81839246 81839398 -21655576 + B3 SINE B2 1 177 -21 8 1209 331 280 56 82 chr15 81839421 81839654 -21655320 - L2c LINE L2 -132 3255 3029 8 1209 2244 135 111 0 chr15 81839726 81840105 -21654869 + MTC LTR MaLR 1 421 0 8 1209 1141 72 0 0 chr15 81840189 81840327 -21654647 + B1_Mus2 SINE Alu 1 138 -9 8 1209 315 0 0 0 chr15 81840327 81840362 -21654612 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 1209 1370 98 5 15 chr15 81840898 81841094 -21653880 + B2_Mm2 SINE B2 2 195 0 8 1209 270 172 0 0 chr15 81841377 81841435 -21653539 + B4 SINE B4 2 59 -233 8 1209 587 214 169 0 chr15 81841753 81841907 -21653067 + B3A SINE B2 1 180 -18 8 1209 1610 32 21 0 chr15 81842146 81842334 -21652640 - B2_Mm1a SINE B2 0 193 2 8 1209 508 197 263 0 chr15 81842359 81842511 -21652463 - B3A SINE B2 -6 192 1 8 1209 228 204 18 18 chr15 81842747 81842802 -21652172 + MIRm SINE MIR 55 109 -167 8 1209 324 70 0 0 chr15 81842958 81843001 -21651973 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 1209 457 267 150 15 chr15 81843006 81843139 -21651835 - RSINE1 SINE B4 -12 153 3 9 1209 264 284 8 142 chr15 81843157 81843284 -21651690 + MT2B LTR ERVL 155 264 -337 9 1209 786 173 29 7 chr15 81843175 81843315 -21651659 + B1_Mur3 SINE Alu 6 148 -1 9 1209 312 203 0 14 chr15 81843689 81843759 -21651215 + ID4_ SINE ID 1 69 -14 9 1209 297 0 0 0 chr15 81844045 81844078 -21650896 + (CA)n Simple_repeat Simple_repeat 2 34 0 9 1209 1033 128 0 13 chr15 81844291 81844449 -21650525 + B2_Mm1t SINE B2 35 190 -3 9 1209 387 238 0 36 chr15 81845032 81845115 -21649859 - PB1D10 SINE Alu -27 90 11 9 1209 267 337 10 39 chr15 81845115 81845134 -21649840 - ID_B1 SINE B4 -53 171 73 9 1209 285 259 0 58 chr15 81845196 81845282 -21649692 - ID4_ SINE ID 0 83 3 9 1209 225 217 180 16 chr15 81845286 81845347 -21649627 - MER5A DNA MER1_type -117 72 2 9 1209 198 0 0 0 chr15 81847488 81847510 -21647464 + (T)n Simple_repeat Simple_repeat 1 22 0 9 1209 201 133 0 0 chr15 81847582 81847612 -21647362 + (GGA)n Simple_repeat Simple_repeat 2 31 0 9 1209 745 191 26 190 chr15 81847902 81848134 -21646840 - B3 SINE B2 -1 194 1 9 1209 423 228 0 0 chr15 81848136 81848215 -21646759 - ID_B1 SINE B4 -3 221 143 9 1209 189 0 0 0 chr15 81848215 81848236 -21646738 + (T)n Simple_repeat Simple_repeat 1 21 0 9 1209 1160 206 9 14 chr15 81848399 81848611 -21646363 + B3 SINE B2 1 211 -5 9 1209 565 100 0 0 chr15 81848628 81848708 -21646266 - B1_Mus2 SINE Alu -5 142 63 9 1209 863 241 12 17 chr15 81848707 81848880 -21646094 + B3 SINE B2 40 211 -5 9 1209 840 176 0 7 chr15 81848897 81849040 -21645934 - B1_Mus2 SINE Alu -5 142 1 9 1209 1198 55 0 0 chr15 81849044 81849189 -21645785 - B1_Mus1 SINE Alu -2 146 2 9 1209 816 142 21 7 chr15 81849554 81849696 -21645278 + B1_Mur2 SINE Alu 5 148 -1 9 1209 243 291 36 0 chr15 81849925 81849980 -21644994 + B1F1 SINE Alu 3 59 -90 9 1209 3030 164 74 18 chr15 81850062 81850613 -21644361 - RMER4B LTR ERVK 0 585 4 9 1209 571 210 89 0 chr15 81850613 81850737 -21644237 - B1_Mur4 SINE Alu -15 135 1 9 1209 810 21 0 0 chr15 81850756 81850852 -21644122 + (TG)n Simple_repeat Simple_repeat 2 97 0 9 1209 672 234 14 21 chr15 81850858 81850998 -21643976 - B3A SINE B2 -58 140 2 9 1209 1397 58 15 59 chr15 81851008 81851210 -21643764 - B2_Mm2 SINE B2 0 195 3 9 1209 228 35 0 0 chr15 81851239 81851268 -21643706 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 9 1209 1097 93 0 0 chr15 81851270 81851410 -21643564 - B1_Mus1 SINE Alu -8 140 1 9 1209 513 282 23 79 chr15 81851415 81851592 -21643382 - ID_B1 SINE B4 -3 221 55 9 1209 28 61 0 0 chr15 81851602 81851651 -21643323 + AT_rich Low_complexity Low_complexity 1 49 0 9 1209 1017 231 5 9 chr15 81851652 81851862 -21643112 - B3 SINE B2 -7 209 1 9 1209 723 201 181 16 chr15 81852036 81852218 -21642756 + ID_B1 SINE B4 5 216 -8 9 1209 225 209 119 0 chr15 81852229 81852296 -21642678 + L1M LINE L1 5324 5398 -902 9 1209 900 128 21 0 chr15 81852299 81852440 -21642534 + B1_Mur4 SINE Alu 6 149 -1 9 1209 459 282 18 9 chr15 81852609 81852720 -21642254 + ID_B1 SINE B4 2 113 -111 9 1209 319 283 33 0 chr15 81852716 81852808 -21642166 - ID_B1 SINE B4 -85 139 45 9 1209 939 190 20 5 chr15 81853533 81853729 -21641245 - B3 SINE B2 -15 201 3 9 1209 1113 96 7 0 chr15 81853858 81854004 -21640970 + B1_Mus1 SINE Alu 1 147 -1 9 1209 896 245 10 54 chr15 81854029 81854232 -21640742 - B3 SINE B2 -8 208 15 9 1209 652 210 42 7 chr15 81854279 81854423 -21640551 - B1_Mur4 SINE Alu 0 150 2 9 1209 354 317 50 14 chr15 81854713 81854854 -21640120 - B1F1 SINE Alu -1 148 3 9 1209 376 215 51 0 chr15 81854879 81854958 -21640016 + B3 SINE B2 117 199 -17 9 1209 355 235 82 4 chr15 81855001 81855096 -21639878 + PB1D10 SINE Alu 3 102 -46 9 1209 339 259 74 0 chr15 81855146 81855227 -21639747 + PB1 SINE Alu 26 112 -15 9 1209 352 299 17 25 chr15 81855253 81855373 -21639601 - ID_B1 SINE B4 -16 208 90 9 1209 418 222 101 0 chr15 81855438 81855537 -21639437 - B1F SINE Alu -24 125 17 9 1209 314 319 69 0 chr15 81855548 81855664 -21639310 - B1F2 SINE Alu -1 148 25 9 1209 332 239 116 32 chr15 81855764 81855776 -21639198 + MT2B LTR ERVL 152 171 -430 9 1209 405 201 192 0 chr15 81855776 81855876 -21639098 + B1_Mm SINE Alu 1 119 -1 9 1209 267 304 37 25 chr15 81855805 81855886 -21639088 + RLTR25A LTR ERVK 522 603 -500 9 1209 864 179 36 104 chr15 81856424 81856617 -21638357 - B3A SINE B2 -12 183 4 9 1209 607 264 14 7 chr15 81856660 81856805 -21638169 + RSINE1 SINE B4 5 150 -15 9 1209 868 129 49 21 chr15 81856828 81856971 -21638003 - B1_Mus2 SINE Alu 0 147 1 9 1209 198 0 0 0 chr15 81857000 81857022 -21637952 + (TAA)n Simple_repeat Simple_repeat 2 23 0 9 1209 1309 105 39 0 chr15 81857024 81857205 -21637769 - B2_Mm2 SINE B2 -6 189 2 9 1209 270 0 0 0 chr15 81857213 81857243 -21637731 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 9 1209 329 263 36 36 chr15 81857353 81857491 -21637483 - B1F1 SINE Alu -9 140 3 9 1209 763 234 20 66 chr15 81857893 81858090 -21636884 + B3 SINE B2 1 188 -28 9 1209 572 216 58 29 chr15 81858109 81858247 -21636727 + B1_Mm SINE Alu 1 142 -5 9 1209 357 131 0 0 chr15 81858595 81858656 -21636318 + (TC)n Simple_repeat Simple_repeat 2 62 0 9 1209 574 190 35 0 chr15 81858703 81858819 -21636155 - PB1D9 SINE Alu 0 120 1 9 1209 671 298 73 26 chr15 81859161 81859433 -21635541 - B4A SINE B4 0 292 8 9 1209 189 0 0 0 chr15 81859435 81859456 -21635518 + (C)n Simple_repeat Simple_repeat 1 21 0 9 1209 420 258 52 0 chr15 81860556 81860653 -21634321 - PB1D10 SINE Alu -15 102 1 9 1209 362 226 31 51 chr15 81861217 81861315 -21633659 - LTR50 LTR ERVL -322 473 378 9 1209 1007 58 0 68 chr15 81861892 81862040 -21632934 - B1_Mus1 SINE Alu -9 139 2 9 1209 260 321 48 0 chr15 81862081 81862165 -21632809 + B1F1 SINE Alu 1 88 -61 9 1209 525 294 14 0 chr15 81862226 81862369 -21632605 - B1F SINE Alu 0 149 5 9 1209 685 242 101 20 chr15 81862389 81862587 -21632387 - B3 SINE B2 0 216 3 9 1209 348 83 0 0 chr15 81862596 81862644 -21632330 + (TTCA)n Simple_repeat Simple_repeat 3 50 0 9 1209 821 138 54 0 chr15 81862644 81862774 -21632200 - B1_Mus2 SINE Alu -10 137 1 9 1209 568 196 54 3 chr15 81863162 81863286 -21631688 - B3 SINE B2 -4 194 68 9 1209 208 139 0 0 chr15 81863321 81863357 -21631617 + (T)n Simple_repeat Simple_repeat 1 36 0 9 1209 24 32 0 0 chr15 81863403 81863434 -21631540 + AT_rich Low_complexity Low_complexity 1 31 0 9 1209 1352 74 26 16 chr15 81863548 81863740 -21631234 - B2_Mm2 SINE B2 -1 194 1 9 1209 513 219 35 9 chr15 81863804 81863917 -21631057 - RSINE1 SINE B4 -42 123 6 9 1209 268 314 35 121 chr15 81863949 81864090 -21630884 - RSINE1 SINE B4 -31 134 6 9 1209 335 191 86 53 chr15 81864104 81864234 -21630740 - L1M2 LINE L1 -705 5595 5463 9 1209 459 239 34 17 chr15 81864241 81864360 -21630614 + ID_B1 SINE B4 90 210 -14 9 1209 680 225 62 0 chr15 81864451 81864611 -21630363 - ID_B1 SINE B4 -20 204 35 9 1209 482 136 59 39 chr15 81864616 81864728 -21630246 - L1M2 LINE L1 -834 5457 5344 9 1209 483 232 70 18 chr15 81864972 81865086 -21629888 + ID_B1 SINE B4 93 212 -12 9 1209 261 218 0 38 chr15 81865319 81865403 -21629571 - RLTR31B_Mm LTR ERVK 0 584 507 9 1209 219 270 87 29 chr15 81865518 81865621 -21629353 - MIRb SINE MIR -88 180 72 9 1209 1098 52 7 7 chr15 81865623 81865759 -21629215 + B1_Mus1 SINE Alu 5 140 -8 9 1209 1140 88 0 203 chr15 81866452 81866616 -21628358 - B2_Mm1a SINE B2 0 193 35 9 1209 1199 41 0 14 chr15 81866616 81866763 -21628211 + B1_Mm SINE Alu 1 145 -2 9 1209 1140 88 0 203 chr15 81866763 81866839 -21628135 - B2_Mm1a SINE B2 -159 34 2 9 1209 339 78 0 0 chr15 81866848 81866899 -21628075 + (T)n Simple_repeat Simple_repeat 1 51 0 9 1209 283 329 12 12 chr15 81868320 81868403 -21626571 - RSINE1 SINE B4 -7 158 76 9 1209 584 258 123 70 chr15 81868461 81868632 -21626342 - B3A SINE B2 -6 189 10 9 1209 1092 75 73 99 chr15 81868668 81868860 -21626114 + B2_Mm2 SINE B2 2 188 -7 9 1209 518 242 39 46 chr15 81868863 81868993 -21625981 + RSINE1 SINE B4 4 132 -33 9 1209 239 305 56 28 chr15 81869107 81869215 -21625759 + B4A SINE B4 181 291 -1 9 1209 345 47 0 0 chr15 81869218 81869261 -21625713 + MTB LTR MaLR 209 251 -149 9 1209 1209 54 0 7 chr15 81869850 81869999 -21624975 + B1_Mus1 SINE Alu 1 148 0 9 1209 878 168 92 48 chr15 81870758 81870964 -21624010 + B3 SINE B2 2 216 0 9 1209 265 193 0 50 chr15 81871256 81871316 -21623658 + MER20 DNA MER1_type 81 137 -82 9 1209 216 186 23 0 chr15 81871638 81871681 -21623293 + PB1D10 SINE Alu 64 107 -10 9 1209 419 186 58 8 chr15 81872905 81873016 -21621958 + B1_Mur2 SINE Alu 1 149 0 9 1209 1111 91 0 0 chr15 81873625 81873768 -21621206 + B1_Mus2 SINE Alu 2 144 -3 9 1209 258 245 152 55 chr15 81873802 81873925 -21621049 + PB1D7 SINE Alu 1 131 -18 1 1209 462 228 169 23 chr15 81874595 81874725 -21620249 + B1_Mur4 SINE Alu 1 149 -1 1 1209 470 209 101 29 chr15 81875094 81875232 -21619742 + B1_Mus1 SINE Alu 1 148 0 1 1209 280 185 187 3 chr15 81875402 81875488 -21619486 + PB1D9 SINE Alu 15 112 -8 1 1209 1346 30 0 12 chr15 81875508 81875668 -21619306 + B2_Mm1a SINE B2 1 160 -33 1 1209 306 0 0 0 chr15 81875668 81875702 -21619272 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1 1209 1025 69 30 0 chr15 81876056 81876187 -21618787 + B1_Mus1 SINE Alu 1 135 -13 1 1209 253 315 0 0 chr15 81876235 81876289 -21618685 - ID4_ SINE ID 0 83 30 1 1209 341 222 0 53 chr15 81876727 81876803 -21618171 + PB1D10 SINE Alu 6 77 -40 1 1209 299 244 22 115 chr15 81876803 81876866 -21618108 + ID_B1 SINE B4 87 212 -12 1 1209 546 133 197 16 chr15 81877275 81877397 -21617577 + B1_Mur1 SINE Alu 5 148 -1 1 1209 1171 68 0 0 chr15 81878241 81878388 -21616586 - B1_Mus2 SINE Alu 0 147 1 1 1209 270 0 0 0 chr15 81878388 81878418 -21616556 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1209 1072 144 92 36 chr15 81878497 81878692 -21616282 + URR1B DNA MER1_type 20 225 0 1 1209 256 271 138 22 chr15 81878982 81879121 -21615853 - MIRm SINE MIR -23 185 38 1 1209 858 208 72 5 chr15 81879178 81879371 -21615603 + B3 SINE B2 1 206 -10 1 1209 1116 79 0 0 chr15 81879395 81879534 -21615440 + B1_Mur4 SINE Alu 5 143 -7 1 1209 270 81 0 0 chr15 81879683 81879720 -21615254 + (TCCCC)n Simple_repeat Simple_repeat 3 39 0 1 1209 876 136 0 41 chr15 81879720 81879866 -21615108 - B1_Mus2 SINE Alu -1 146 7 1 1209 424 171 87 119 chr15 81879764 81879890 -21615084 - MT2B LTR ERVL -344 257 136 1 1209 255 114 0 0 chr15 81879957 81880001 -21614973 + (TC)n Simple_repeat Simple_repeat 1 44 0 1 1209 440 273 14 60 chr15 81880004 81880181 -21614793 - ID_B1 SINE B4 -44 248 87 1 1209 261 181 74 111 chr15 81880507 81880588 -21614386 + MLT1A1 LTR MaLR 1 78 -330 1 1209 353 276 211 0 chr15 81880588 81880620 -21614354 + B1F SINE Alu 1 149 0 1 1209 515 198 11 0 chr15 81880620 81880711 -21614263 + ID_B1 SINE B4 133 224 0 1 1209 226 203 35 149 chr15 81880739 81880826 -21614148 + MLT1A1 LTR MaLR 66 142 -232 1 1209 241 26 26 26 chr15 81880847 81880886 -21614088 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1209 1214 22 0 0 chr15 81880886 81881023 -21613951 - B1_Mus1 SINE Alu -11 137 1 1 1209 716 139 20 128 chr15 81881026 81881174 -21613800 - B1_Mur1 SINE Alu -2 147 16 1 1209 606 238 78 112 chr15 81881174 81881258 -21613716 - ID_B1 SINE B4 0 224 1 1 1209 612 231 36 58 chr15 81881282 81881420 -21613554 - B1F SINE Alu 0 149 15 1 1209 847 97 16 16 chr15 81881642 81881768 -21613206 - ORR1A2 LTR MaLR 0 327 202 1 1209 1050 209 168 33 chr15 81881771 81882129 -21612845 + RMER2 LTR ERV1 4 515 -52 1 1209 1760 178 174 65 chr15 81882157 81882668 -21612306 + RMER2 LTR ERV1 1 567 0 1 1209 831 142 7 21 chr15 81882675 81882819 -21612155 - ORR1A4 LTR MaLR -119 210 69 1 1209 4465 150 95 50 chr15 81882819 81883682 -21611292 + RMER19B LTR ERVK 1 902 0 1 1209 533 115 23 0 chr15 81883682 81883769 -21611205 - ORR1B1 LTR MaLR -267 127 39 1 1209 494 291 52 104 chr15 81884720 81885046 -21609928 + RLTR25B LTR ERVK 1 309 -719 1 1209 25 0 0 0 chr15 81885767 81885792 -21609182 + AT_rich Low_complexity Low_complexity 1 25 0 1 1209 326 255 84 78 chr15 81885858 81886024 -21608950 + RLTR25B LTR ERVK 862 1028 0 1 1209 3145 68 2 5 chr15 81886668 81887069 -21607905 + MTB LTR MaLR 1 400 0 1 1209 198 0 0 0 chr15 81887321 81887343 -21607631 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1 1209 1135 44 0 7 chr15 81887343 81887481 -21607493 - B1_Mus2 SINE Alu -10 137 1 1 1209 1197 61 7 0 chr15 81887706 81887853 -21607121 + B1_Mus1 SINE Alu 1 148 0 1 1209 261 79 36 82 chr15 81887853 81887963 -21607011 + A-rich Low_complexity Low_complexity 1 105 0 1 1209 214 294 98 0 chr15 81888010 81888061 -21606913 + B1F SINE Alu 6 61 -88 1 1209 950 118 7 7 chr15 81888068 81888213 -21606761 + B1_Mur4 SINE Alu 6 150 0 1 1209 327 113 0 0 chr15 81888233 81888286 -21606688 + (GAAA)n Simple_repeat Simple_repeat 1 53 0 1 1209 600 241 53 0 chr15 81888520 81888653 -21606321 + B1_Mur1 SINE Alu 5 144 -5 1 1209 234 297 88 24 chr15 81888680 81888745 -21606229 + B1_Mur3 SINE Alu 12 88 -61 1 1209 1095 83 7 27 chr15 81888745 81888894 -21606080 + B1_Mus1 SINE Alu 2 147 -1 1 1209 234 295 55 33 chr15 81888894 81888942 -21606032 + B1_Mur3 SINE Alu 89 140 -9 1 1209 218 196 22 0 chr15 81889047 81889093 -21605881 - B4 SINE B4 -245 47 1 1 1209 332 371 27 36 chr15 81889950 81890171 -21604803 + L2 LINE L2 2541 2759 -660 1 1209 293 247 129 0 chr15 81890175 81890268 -21604706 - L1ME3A LINE L1 -21 6152 6048 1 1209 509 277 54 7 chr15 81890274 81890423 -21604551 + RSINE1 SINE B4 2 157 -8 1 1209 474 203 127 24 chr15 81890470 81890596 -21604378 + B1_Mur1 SINE Alu 11 149 0 1 1209 389 346 49 49 chr15 81890649 81890706 -21604268 + B4 SINE B4 35 91 -201 1 1209 702 191 10 0 chr15 81890706 81890831 -21604143 + B1_Mur2 SINE Alu 2 128 -21 1 1209 216 205 0 106 chr15 81890843 81890917 -21604057 + B1F SINE Alu 3 70 -57 1 1209 1086 118 0 0 chr15 81890952 81891259 -21603715 + (CCAA)n Simple_repeat Simple_repeat 1 307 0 1 1209 306 252 0 0 chr15 81891627 81891726 -21603248 + CT-rich Low_complexity Low_complexity 2 100 0 1 1209 626 233 0 0 chr15 81892081 81892197 -21602777 - ID_B1 SINE B4 0 224 109 1 1209 233 279 0 0 chr15 81892216 81892259 -21602715 - ID SINE ID -179 45 3 1 1209 233 218 149 8 chr15 81892271 81892401 -21602573 + L2a LINE L2 3275 3388 -38 1 1209 2551 66 0 0 chr15 81897289 81897608 -21597366 - ORR1A2 LTR MaLR -8 319 1 1 1209 1271 267 28 6 chr15 81897652 81898013 -21596961 + Lx8 LINE L1 6969 7337 -136 1 1209 29 28 0 0 chr15 81898015 81898051 -21596923 + AT_rich Low_complexity Low_complexity 1 36 0 1 1209 340 244 0 95 chr15 81898051 81898146 -21596828 + MT2B LTR ERVL 155 240 -361 1 1209 519 217 0 0 chr15 81898061 81898153 -21596821 + B1_Mur2 SINE Alu 1 92 -57 1 1209 383 298 37 28 chr15 81898127 81898234 -21596740 + B3A SINE B2 57 164 -34 1 1209 769 160 41 7 chr15 81898241 81898386 -21596588 - RLTR30 LTR ERV1 -3 376 227 1 1209 545 146 24 0 chr15 81898381 81898463 -21596511 + B1_Mur1 SINE Alu 53 136 -13 1 1209 228 260 40 0 chr15 81898656 81898706 -21596268 - ID4 SINE ID -31 52 1 1 1209 308 274 27 14 chr15 81898762 81898836 -21596138 + ID_B1 SINE B4 105 179 -45 1 1209 518 305 135 50 chr15 81898940 81899461 -21595513 + RMER13B LTR ERVK 96 718 -190 1 1209 360 260 13 0 chr15 81899827 81899904 -21595070 + ID_B1 SINE B4 135 212 -12 1 1209 1030 61 84 0 chr15 81899909 81900040 -21594934 - B1_Mus2 SINE Alu -5 142 1 1 1209 971 199 70 25 chr15 81900066 81900267 -21594707 + B3 SINE B2 7 216 0 1 1209 506 220 35 44 chr15 81901315 81901429 -21593545 - PB1D9 SINE Alu -2 118 6 1 1209 306 0 0 0 chr15 81901446 81901480 -21593494 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1 1209 861 26 198 9 chr15 81901480 81901596 -21593378 - B1_Mus1 SINE Alu -9 139 2 1 1209 290 205 286 0 chr15 81901751 81901863 -21593111 + MIRc SINE MIR 11 154 -114 1 1209 546 153 112 0 chr15 81901917 81902015 -21592959 + ID_B1 SINE B4 116 224 0 1 1209 226 301 146 0 chr15 81902704 81902827 -21592147 + MIRc SINE MIR 9 149 -119 1 1209 823 184 7 0 chr15 81903629 81903776 -21591198 + B1_Mur2 SINE Alu 2 149 0 1 1209 1368 111 0 5 chr15 81903785 81903976 -21590998 + B2_Mm2 SINE B2 5 194 -1 1 1209 539 236 9 0 chr15 81904009 81904115 -21590859 + ID_B1 SINE B4 82 188 -36 1 1209 330 305 76 0 chr15 81904115 81904127 -21590847 + B1_Mus2 SINE Alu 1 127 -20 1 1209 392 269 48 81 chr15 81904128 81904237 -21590737 + B3 SINE B2 2 114 -81 1 1209 1143 39 0 0 chr15 81904237 81904367 -21590607 + B1_Mm SINE Alu 1 130 -17 1 1209 1294 112 28 0 chr15 81904367 81904545 -21590429 - B2_Mm1t SINE B2 -9 184 1 1 1209 384 269 48 81 chr15 81904545 81904620 -21590354 + B2_Mm2 SINE B2 115 180 -15 1 1209 492 302 100 7 chr15 81904635 81904785 -21590189 + RSINE1 SINE B4 2 165 0 1 1209 649 271 0 7 chr15 81904925 81905066 -21589908 + ID_B1 SINE B4 84 223 -1 1 1209 206 307 92 13 chr15 81905074 81905150 -21589824 - MER5B DNA MER1_type -47 131 50 1 1209 560 171 0 9 chr15 81905157 81905269 -21589705 + CT-rich Low_complexity Low_complexity 3 113 0 1 1209 185 196 0 148 chr15 81905346 81905400 -21589574 + MER5B DNA MER1_type 116 161 -17 1 1209 183 261 231 0 chr15 81905688 81905753 -21589221 - MIR SINE MIR -62 146 67 1 1209 623 25 25 0 chr15 81905899 81905979 -21588995 + (TTTC)n Simple_repeat Simple_repeat 1 82 0 1 1209 1296 71 47 0 chr15 81905979 81906149 -21588825 - B2_Mm1a SINE B2 -15 178 1 1 1209 475 233 22 0 chr15 81906374 81906464 -21588510 - PB1D9 SINE Alu -28 92 1 1 1209 279 271 10 124 chr15 81906383 81906480 -21588494 - MT2B LTR ERVL -364 237 152 1 1209 31 0 0 0 chr15 81906480 81906511 -21588463 + AT_rich Low_complexity Low_complexity 1 31 0 1 1209 24 67 0 0 chr15 81906546 81906591 -21588383 + AT_rich Low_complexity Low_complexity 1 45 0 1 1209 313 311 44 0 chr15 81906718 81906808 -21588166 - PB1D10 SINE Alu 0 117 24 1 1209 1151 172 39 24 chr15 81906848 81907056 -21587918 - B3 SINE B2 -5 211 1 1 1209 276 208 0 0 chr15 81907130 81907178 -21587796 - B1_Mus2 SINE Alu -99 48 1 1 1209 271 175 105 0 chr15 81907357 81907414 -21587560 + ID_B1 SINE B4 156 218 -6 1 1209 423 0 0 0 chr15 81907677 81907724 -21587250 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1209 269 293 0 0 chr15 81907725 81907783 -21587191 - tRNA-Ala-GCY_ tRNA tRNA -16 59 2 1 1209 518 259 27 0 chr15 81908300 81908412 -21586562 - PB1D10 SINE Alu -2 115 1 1 1209 365 292 79 32 chr15 81908529 81908686 -21586288 - RSINE1 SINE B4 -1 164 1 1 1209 1605 57 0 0 chr15 81908712 81908904 -21586070 + B2_Mm1t SINE B2 2 193 0 1 1209 186 67 67 0 chr15 81908955 81909000 -21585974 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 1 1209 1411 71 22 0 chr15 81909005 81909187 -21585787 - B2_Mm2 SINE B2 -8 187 2 1 1209 891 170 0 13 chr15 81909189 81909338 -21585636 - B1_Mus1 SINE Alu -1 147 1 1 1209 800 247 11 17 chr15 81909474 81909651 -21585323 - B3A SINE B2 -18 180 5 1 1209 335 240 85 57 chr15 81909753 81909859 -21585115 + B3A SINE B2 90 198 0 1 1209 211 220 20 20 chr15 81909864 81909915 -21585059 + B1_Mus2 SINE Alu 36 86 -61 1 1209 183 42 0 0 chr15 81909948 81909972 -21585002 + (CCAA)n Simple_repeat Simple_repeat 4 27 0 1 1209 1151 19 25 19 chr15 81909990 81910152 -21584822 + (TCTCC)n Simple_repeat Simple_repeat 2 164 0 1 1209 294 29 0 0 chr15 81910152 81910187 -21584787 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 1 1209 1251 48 0 0 chr15 81910188 81910335 -21584639 - B1_Mus2 SINE Alu 0 147 1 1 1209 423 0 0 0 chr15 81910808 81910855 -21584119 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1209 1160 152 66 75 chr15 81911163 81911391 -21583583 - URR1A DNA MER1_type 0 226 1 1 1209 212 318 203 11 chr15 81911419 81911705 -21583269 - L2b LINE L2 -26 3349 3009 1 1209 376 229 51 68 chr15 81911746 81911863 -21583111 - B3 SINE B2 -16 200 86 1 1209 931 203 137 16 chr15 81911857 81912112 -21582862 + MTD LTR MaLR 134 419 0 1 1209 229 305 67 0 chr15 81912467 81912572 -21582402 + PB1D10 SINE Alu 2 113 -4 1 1209 345 345 36 6 chr15 81912739 81912873 -21582101 - MER68 LTR ERVL -24 583 416 1 1209 413 329 135 48 chr15 81912958 81913188 -21581786 - MER68 LTR ERVL -292 271 22 1 1209 222 116 0 0 chr15 81913880 81913923 -21581051 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 1209 1150 65 0 0 chr15 81913943 81914081 -21580893 + B1_Mus1 SINE Alu 1 138 -10 1 1209 303 28 0 0 chr15 81914081 81914117 -21580857 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1 1209 1322 188 25 89 chr15 81914236 81914563 -21580411 - RLTR11A LTR ERVK -1 527 222 1 1209 277 230 0 63 chr15 81914570 81914641 -21580333 - ID4_ SINE ID -15 68 2 1 1209 235 267 93 28 chr15 81914725 81914833 -21580141 - LTR48B LTR ERV1 -141 503 389 1 1209 256 235 13 128 chr15 81915725 81915803 -21579171 - B1_Mus1 SINE Alu -79 69 1 1 1209 695 62 21 0 chr15 81915810 81915907 -21579067 - B1_Mur4 SINE Alu -6 144 46 1 1209 247 342 122 9 chr15 81915986 81916207 -21578767 - L2c LINE L2 -59 3328 3083 1 1209 241 289 40 0 chr15 81916324 81916400 -21578574 - ID4_ SINE ID -4 79 1 1 1209 575 230 63 8 chr15 81917001 81917128 -21577846 - B1F SINE Alu -2 147 14 1 1209 617 152 161 0 chr15 81917131 81917243 -21577731 - B1_Mur3 SINE Alu -19 130 1 1 1209 587 272 0 7 chr15 81917259 81917396 -21577578 - ID_B1 SINE B4 -7 217 82 1 1209 311 256 11 44 chr15 81917470 81917560 -21577414 - HAL1b LINE L1 -508 1501 1415 1 1209 225 128 0 0 chr15 81917737 81917784 -21577190 + (C)n Simple_repeat Simple_repeat 1 47 0 1 1209 305 277 38 75 chr15 81918317 81918477 -21576497 + RSINE1 SINE B4 11 164 -1 1 1209 209 33 33 0 chr15 81918528 81918558 -21576416 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1209 562 286 0 8 chr15 81918853 81918980 -21575994 + ID_B1 SINE B4 87 212 -12 1 1209 584 246 16 0 chr15 81918989 81919111 -21575863 + B1F SINE Alu 19 142 -7 1 1209 1162 206 0 5 chr15 81919130 81919335 -21575639 + B3 SINE B2 3 206 -10 1 1209 265 167 178 14 chr15 81919409 81919482 -21575492 + MLT1C LTR MaLR 217 301 -166 1 1209 292 277 15 0 chr15 81919525 81919590 -21575384 + RMER30 DNA MER1_type 10 75 -127 1 1209 253 170 308 39 chr15 81919617 81919721 -21575253 + MTE2a LTR MaLR 5 136 -243 1 1210 222 105 0 0 chr15 81920096 81920134 -21574840 + (TCTG)n Simple_repeat Simple_repeat 1 38 0 1 1210 431 256 0 0 chr15 81920209 81920291 -21574683 - ID4_ SINE ID 0 83 2 1 1210 1764 150 55 35 chr15 81920404 81920613 -21574361 - RMER10B LTR ERVL -6 392 189 1 1210 1081 118 11 0 chr15 81920613 81920791 -21574183 + (GGA)n Simple_repeat Simple_repeat 1 180 0 1 1210 1764 150 55 35 chr15 81920791 81920948 -21574026 - RMER10B LTR ERVL -210 188 19 1 1210 259 354 13 0 chr15 81921157 81921236 -21573738 - ID4 SINE ID -2 81 2 1 1210 1037 184 9 49 chr15 81922042 81922265 -21572709 - B3 SINE B2 -2 214 1 1 1210 983 116 20 0 chr15 81922369 81922515 -21572459 - B1_Mur4 SINE Alu 0 150 2 1 1210 809 102 34 0 chr15 81922794 81922912 -21572062 - B1_Mus1 SINE Alu -26 122 1 1 1210 236 271 0 0 chr15 81923506 81923554 -21571420 + (CATA)n Simple_repeat Simple_repeat 3 50 0 1 1210 1257 133 9 4 chr15 81923554 81923761 -21571213 - B2_Mm2 SINE B2 -2 214 2 1 1210 904 150 14 0 chr15 81923817 81923957 -21571017 + B1_Mus2 SINE Alu 5 146 -1 1 1210 731 133 8 0 chr15 81924671 81924799 -21570175 + (TTCC)n Simple_repeat Simple_repeat 2 130 0 1 1210 1069 136 0 0 chr15 81924799 81924946 -21570028 - B1_Mur4 SINE Alu 0 150 4 1 1210 823 147 12 0 chr15 81925051 81925214 -21569760 + (TCTA)n Simple_repeat Simple_repeat 1 165 0 1 1210 279 54 0 0 chr15 81925214 81925251 -21569723 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1210 697 250 0 7 chr15 81925251 81925388 -21569586 - RSINE1 SINE B4 -25 140 5 1 1210 571 264 7 46 chr15 81925644 81925661 -21569313 - B3A SINE B2 0 198 184 1 1210 198 0 0 0 chr15 81925661 81925683 -21569291 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 1210 571 264 7 46 chr15 81925683 81925816 -21569158 - B3A SINE B2 -15 183 55 1 1210 314 209 30 2 chr15 81926595 81926667 -21568307 - MTD LTR MaLR 0 419 303 1 1210 784 159 7 50 chr15 81926718 81926857 -21568117 - B1_Mur4 SINE Alu -9 141 9 1 1210 574 274 66 56 chr15 81926855 81927052 -21567922 - MTD LTR MaLR -208 211 13 1 1210 1235 41 0 13 chr15 81927055 81927192 -21567782 + B1_Mus1 SINE Alu 1 137 -11 1 1210 450 0 0 0 chr15 81927192 81927242 -21567732 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 1 1210 1235 41 0 13 chr15 81927242 81927253 -21567721 + B1_Mus1 SINE Alu 138 147 -1 1 1210 1425 71 22 0 chr15 81927267 81927449 -21567525 + B2_Mm2 SINE B2 1 186 -9 1 1210 330 26 0 0 chr15 81927449 81927488 -21567486 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 1 1210 199 262 0 13 chr15 81927490 81927558 -21567416 - MIR SINE MIR -94 174 106 1 1210 689 213 6 0 chr15 81927835 81928004 -21566970 + CT-rich Low_complexity Low_complexity 3 172 0 1 1210 426 162 68 0 chr15 81928035 81928109 -21566865 - B1F1 SINE Alu -60 89 11 1 1210 299 195 138 0 chr15 81928270 81928357 -21566617 - B3 SINE B2 0 216 118 1 1210 306 332 171 13 chr15 81928862 81929100 -21565874 - L2b LINE L2 -2 3424 3149 1 1210 1455 70 27 0 chr15 81929863 81930049 -21564925 + B2_Mm2 SINE B2 2 192 -3 1 1210 790 116 58 0 chr15 81930442 81930589 -21564385 - B2_Mm2 SINE B2 0 193 15 1 1210 505 214 0 79 chr15 81930595 81930722 -21564252 - PB1D10 SINE Alu 0 117 1 1 1210 429 70 0 0 chr15 81931127 81931184 -21563790 + (TGAA)n Simple_repeat Simple_repeat 2 58 0 1 1210 609 27 0 0 chr15 81932131 81932206 -21562768 + (GAAA)n Simple_repeat Simple_repeat 4 78 0 1 1210 339 296 45 0 chr15 81932226 81932314 -21562660 - L1MC4 LINE L1 -144 7898 7807 1 1210 372 281 190 0 chr15 81932315 81932436 -21562538 + B1F SINE Alu 1 144 -5 1 1210 235 181 108 27 chr15 81932492 81932566 -21562408 - ID4_ SINE ID -1 82 3 1 1210 840 119 87 0 chr15 81932689 81932815 -21562159 - B1_Mus2 SINE Alu -6 141 5 1 1210 303 233 135 118 chr15 81932843 81933013 -21561961 - MTEa LTR MaLR -200 179 7 1 1210 403 372 51 0 chr15 81933253 81933409 -21561565 - MER20 DNA MER1_type -55 164 1 1 1210 871 236 31 0 chr15 81933894 81934085 -21560889 + ID_B1 SINE B4 7 203 -21 1 1210 270 0 0 0 chr15 81934092 81934122 -21560852 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 1210 248 367 100 17 chr15 81934330 81934560 -21560414 + L2 LINE L2 1994 2242 -1177 1 1210 227 182 0 0 chr15 81934715 81934759 -21560215 + tRNA-Ala-GCY_ tRNA tRNA 1 44 -31 1 1210 195 270 90 60 chr15 81935882 81935949 -21559025 + MIR3 SINE MIR 86 154 -54 1 1210 431 295 23 47 chr15 81935982 81936110 -21558864 - B1F SINE Alu -6 143 19 1 1210 435 266 18 9 chr15 81936279 81936389 -21558585 - B1F SINE Alu -5 144 34 1 1210 350 273 26 24 chr15 81937153 81937290 -21557684 + MIRb SINE MIR 37 171 -37 1 1210 436 204 50 50 chr15 81937996 81938026 -21556948 - PB1D7 SINE Alu -1 119 90 1 1210 630 198 35 0 chr15 81938026 81938142 -21556832 - PB1D9 SINE Alu 0 120 1 1 1210 567 152 1 1 chr15 81938142 81938230 -21556744 - B1_Mus1 SINE Alu -31 89 1 1 1210 402 282 30 55 chr15 81938405 81938570 -21556404 + RSINE1 SINE B4 3 163 -2 1 1210 261 0 0 0 chr15 81938578 81938607 -21556367 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1210 414 121 0 0 chr15 81938667 81938733 -21556241 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 1210 486 239 11 0 chr15 81938866 81938958 -21556016 + B1_Mur2 SINE Alu 32 124 -25 1 1210 288 0 0 0 chr15 81938960 81938992 -21555982 + (TATG)n Simple_repeat Simple_repeat 1 32 0 1 1210 1106 85 19 6 chr15 81938995 81939153 -21555821 - B1_Mus1 SINE Alu -2 309 1 1 1210 783 142 0 30 chr15 81939191 81939322 -21555652 + B1_Mus1 SINE Alu 6 132 -16 1 1210 990 303 84 12 chr15 81939327 81939661 -21555313 - MLT1A0 LTR MaLR -7 358 1 1 1210 207 157 0 0 chr15 81940226 81940277 -21554697 + (CAAA)n Simple_repeat Simple_repeat 1 51 0 1 1210 255 125 0 0 chr15 81940568 81940608 -21554366 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1210 366 295 114 18 chr15 81940609 81940723 -21554251 - RSINE1 SINE B4 -23 142 18 1 1210 526 258 18 85 chr15 81941034 81941199 -21553775 - RSINE1 SINE B4 -1 164 11 1 1210 409 297 110 0 chr15 81941332 81941480 -21553494 - RMER15-int LTR ERVL -4668 331 195 1 1210 836 200 0 0 chr15 81941635 81941770 -21553204 + B1_Mus2 SINE Alu 1 135 -12 1 1210 521 279 72 59 chr15 81941903 81941915 -21553059 + ID SINE ID 43 55 -237 1 1210 400 276 11 0 chr15 81941915 81942002 -21552972 + PB1D10 SINE Alu 9 96 -21 1 1210 521 279 72 59 chr15 81942002 81942159 -21552815 + ID_B1 SINE B4 56 232 -60 1 1210 2425 93 0 0 chr15 81942466 81942788 -21552186 - ORR1A2 LTR MaLR 0 327 6 1 1210 318 333 11 0 chr15 81943501 81943604 -21551370 + MIR SINE MIR 55 158 -118 1 1210 1238 34 0 14 chr15 81943652 81943800 -21551174 - B1_Mus2 SINE Alu 0 147 2 1 1210 200 35 35 0 chr15 81944482 81944511 -21550463 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1 1210 513 237 107 0 chr15 81944511 81944634 -21550340 - B1_Mur3 SINE Alu -11 138 2 1 1210 500 258 8 0 chr15 81944641 81944761 -21550213 - ID_B1 SINE B4 0 224 104 1 1210 304 275 109 44 chr15 81945179 81945316 -21549658 - MIRc SINE MIR -129 147 2 1 1210 998 162 0 0 chr15 81945317 81945465 -21549509 - B1_Mur4 SINE Alu -1 149 2 1 1210 258 206 203 47 chr15 81945497 81945582 -21549392 - B1F SINE Alu -49 100 1 1 1210 245 273 15 0 chr15 81946389 81946455 -21548519 + PB1D10 SINE Alu 4 70 -47 1 1210 226 109 87 0 chr15 81946462 81946508 -21548466 - MT2A LTR ERVL 0 533 484 1 1210 965 134 199 46 chr15 81946654 81946740 -21548234 + URR1A DNA MER1_type 1 123 -103 1 1210 1393 76 11 0 chr15 81946740 81946924 -21548050 + B2_Mm1t SINE B2 2 187 -6 1 1210 965 134 199 46 chr15 81946924 81947033 -21547941 + URR1A DNA MER1_type 124 226 0 1 1210 702 136 18 35 chr15 81947088 81947202 -21547772 + B1_Mur2 SINE Alu 31 142 -7 1 1210 246 261 0 0 chr15 81947268 81947314 -21547660 + (CG)n Simple_repeat Simple_repeat 2 47 0 1 1210 873 272 23 58 chr15 81947354 81947416 -21547558 - B4 SINE B4 -12 280 230 1 1210 855 120 26 90 chr15 81947416 81947572 -21547402 - B1_Mus2 SINE Alu 0 147 2 1 1210 873 272 23 58 chr15 81947572 81947753 -21547221 - B4 SINE B4 -63 229 46 1 1210 12395 85 14 55 chr15 81947753 81948136 -21546838 - RLTR22_Mur LTR ERVK 0 1848 1471 1 1210 967 100 154 12 chr15 81948136 81948298 -21546676 - B2_Mm1t SINE B2 -8 185 1 1 1210 12395 85 14 55 chr15 81948298 81948572 -21546402 - RLTR22_Mur LTR ERVK -378 1470 1251 1 1210 1620 31 5 10 chr15 81948572 81948765 -21546209 - B2_Mm1a SINE B2 0 193 2 1 1210 12395 85 14 55 chr15 81948765 81948985 -21545989 - RLTR22_Mur LTR ERVK -598 1250 1046 1 1210 1119 129 0 0 chr15 81948985 81949163 -21545811 + (TCC)n Simple_repeat Simple_repeat 2 179 0 1 1210 12395 85 14 55 chr15 81949163 81950200 -21544774 - RLTR22_Mur LTR ERVK -803 1045 10 1 1210 1029 206 4 93 chr15 81950364 81950388 -21544586 + B3 SINE B2 1 16 -200 1 1210 1025 193 65 19 chr15 81950388 81950604 -21544370 - URR1A DNA MER1_type 0 226 1 1 1210 1029 206 4 93 chr15 81950604 81950815 -21544159 + B3 SINE B2 17 215 -1 1 1210 638 226 120 0 chr15 81951003 81951136 -21543838 + RSINE1 SINE B4 4 152 -13 1 1210 398 256 86 43 chr15 81951228 81951367 -21543607 + ID_B1 SINE B4 77 221 -3 1 1210 228 273 15 15 chr15 81951400 81951467 -21543507 + PB1D10 SINE Alu 51 117 0 1 1210 792 97 0 34 chr15 81951596 81951714 -21543260 - B1_Mur4 SINE Alu -1 149 36 1 1210 723 260 18 60 chr15 81952057 81952274 -21542700 - B3 SINE B2 -3 213 6 1 1210 848 249 10 29 chr15 81952466 81952673 -21542301 + B3 SINE B2 1 203 -13 1 1210 820 228 142 5 chr15 81952709 81952899 -21542075 + B3 SINE B2 1 216 0 1 1210 899 248 70 8 chr15 81952926 81953170 -21541804 + Lx5 LINE L1 6745 7003 -47 1 1210 816 158 13 40 chr15 81953212 81953364 -21541610 + B1_Mur3 SINE Alu 2 149 0 1 1210 422 230 86 26 chr15 81953445 81953561 -21541413 + B1F2 SINE Alu 26 148 -1 1 1210 269 317 39 0 chr15 81954013 81954117 -21540857 - MIRb SINE MIR -89 179 72 1 1210 2615 65 78 34 chr15 81955765 81956147 -21538827 - MTB LTR MaLR 0 400 2 1 1210 213 314 27 54 chr15 81956181 81956205 -21538769 + B4 SINE B4 65 135 -156 1 1210 265 229 0 20 chr15 81956205 81956254 -21538720 + B1F1 SINE Alu 3 50 -99 1 1210 198 0 0 0 chr15 81956269 81956291 -21538683 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1210 185 0 40 0 chr15 81956321 81956346 -21538628 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1 1210 1195 77 6 0 chr15 81956347 81956503 -21538471 - B2_Mm2 SINE B2 -37 158 2 1 1210 244 136 416 0 chr15 81956509 81956600 -21538374 - B2_Mm2 SINE B2 -3 192 64 1 1210 1277 72 12 0 chr15 81956644 81956811 -21538163 - B2_Mm2 SINE B2 -26 169 1 1 1210 1200 62 0 0 chr15 81957376 81957520 -21537454 + B1_Mus1 SINE Alu 3 146 -2 1 1210 253 300 144 9 chr15 81959062 81959173 -21535801 + MIRc SINE MIR 24 149 -119 1 1210 420 256 0 0 chr15 81959251 81959337 -21535637 - B1F SINE Alu -62 87 2 1 1210 207 0 0 0 chr15 81959408 81959431 -21535543 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1210 961 285 79 0 chr15 81959446 81959699 -21535275 - B4A SINE B4 -9 283 11 1 1210 197 309 43 43 chr15 81959704 81959819 -21535155 + L2a LINE L2 3275 3389 -37 1 1210 239 239 110 33 chr15 81960191 81960282 -21534692 - MIRc SINE MIR -145 123 26 1 1210 228 225 40 53 chr15 81960899 81960974 -21534000 - LTR81C LTR ERV1? -374 779 706 1 1210 1330 200 19 58 chr15 81960993 81961301 -21533673 - ORR1C2 LTR MaLR 0 384 89 1 1210 243 297 27 0 chr15 81962113 81962187 -21532787 - MER49 LTR ERV1 -824 99 24 1 1210 629 26 0 0 chr15 81962491 81962569 -21532405 - B1_Mur4 SINE Alu 0 150 73 1 1210 603 124 168 0 chr15 81962914 81963027 -21531947 - B1_Mur2 SINE Alu 0 149 18 1 1210 344 212 246 42 chr15 81963399 81963566 -21531408 + L1MC4a LINE L1 7669 7869 -13 1 1210 286 242 98 0 chr15 81963566 81963660 -21531314 + B1F SINE Alu 1 113 -36 1 1210 601 261 29 0 chr15 81963707 81963845 -21531129 + ID_B1 SINE B4 79 220 -4 1 1210 520 179 0 12 chr15 81963922 81964007 -21530967 - B1_Mus2 SINE Alu -63 84 1 1 1210 1102 244 153 35 chr15 81964400 81964773 -21530201 - MTD LTR MaLR 0 419 3 1 1210 198 265 86 67 chr15 81965649 81965754 -21529220 + MIRc SINE MIR 14 120 -148 1 1210 260 279 59 0 chr15 81966148 81966216 -21528758 - LTR40c LTR ERVL -10 452 381 1 1210 450 368 81 15 chr15 81966233 81966491 -21528483 - LTR40c LTR ERVL -129 333 63 1 1210 348 238 86 95 chr15 81966536 81966652 -21528322 + PB1D7 SINE Alu 6 120 0 1 1210 2796 67 45 0 chr15 81966891 81967266 -21527708 - MTB LTR MaLR 0 400 9 1 1210 352 256 0 47 chr15 81967275 81967361 -21527613 - PB1D10 SINE Alu -31 86 5 1 1210 338 278 44 44 chr15 81967361 81967388 -21527586 - ID_B1 SINE B4 -57 167 55 1 1210 379 280 75 50 chr15 81967403 81967602 -21527372 - HERVL40-int LTR ERVL -203 5327 5124 1 1210 339 314 46 15 chr15 81967677 81967874 -21527100 - HERVL40-int LTR ERVL -550 4980 4778 1 1210 228 284 9 112 chr15 81967883 81967990 -21526984 - RLTR13D2 LTR ERVK -319 704 609 1 1210 261 140 0 0 chr15 81968105 81968162 -21526812 + (T)n Simple_repeat Simple_repeat 1 57 0 1 1210 1209 62 0 0 chr15 81968163 81968309 -21526665 - B1_Mus1 SINE Alu 0 148 3 1 1210 238 295 37 49 chr15 81968313 81968395 -21526579 + AluG_3 SINE Alu 137 217 -94 1 1210 230 256 154 0 chr15 81968393 81968471 -21526503 - MER68 LTR ERVL -136 427 338 1 1210 446 227 35 35 chr15 81968740 81968854 -21526120 - PB1D10 SINE Alu -2 115 2 1 1210 235 284 149 41 chr15 81969042 81969163 -21525811 - LTR40c LTR ERVL -331 134 1 1 1210 189 171 0 0 chr15 81969485 81969520 -21525454 + CT-rich Low_complexity Low_complexity 2 36 0 1 1210 1072 99 0 0 chr15 81969521 81969662 -21525312 - B1_Mus1 SINE Alu -5 143 3 1 1210 22 35 0 0 chr15 81969903 81969932 -21525042 + AT_rich Low_complexity Low_complexity 1 29 0 1 1210 1144 62 14 7 chr15 81969932 81970078 -21524896 + B1_Mus2 SINE Alu 1 147 0 1 1210 1350 72 5 22 chr15 81970084 81970268 -21524706 - B2_Mm2 SINE B2 -14 181 1 1 1210 183 42 0 0 chr15 81972016 81972040 -21522934 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 1210 854 133 74 0 chr15 81973051 81973186 -21521788 - B1_Mur3 SINE Alu 0 149 5 1 1210 859 185 121 32 chr15 81973456 81973646 -21521328 + B3 SINE B2 1 207 -9 1 1210 366 20 0 0 chr15 81973724 81973773 -21521201 - B1_Mus2 SINE Alu 0 147 99 1 1210 23 0 0 0 chr15 81973777 81973800 -21521174 + AT_rich Low_complexity Low_complexity 1 23 0 1 1210 1642 26 5 10 chr15 81973808 81974002 -21520972 + B2_Mm1a SINE B2 1 193 0 1 1210 467 177 150 0 chr15 81974535 81974648 -21520326 + B1F2 SINE Alu 14 143 -6 1 1210 685 271 65 40 chr15 81974956 81975154 -21519820 - MER20 DNA MER1_type -1 218 12 1 1210 1450 63 26 5 chr15 81975714 81975905 -21519069 - B2_Mm2 SINE B2 0 195 1 1 1210 556 233 100 8 chr15 81975963 81976093 -21518881 - RSINE1 SINE B4 -22 143 2 1 1210 189 0 0 0 chr15 81976164 81976185 -21518789 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1210 204 45 21 62 chr15 81976182 81976230 -21518744 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 1 1210 21 0 0 0 chr15 81977634 81977655 -21517319 + GC_rich Low_complexity Low_complexity 1 21 0 1 1210 233 305 121 46 chr15 81978600 81978765 -21516209 - MIRc SINE MIR -23 185 12 1 1210 185 363 48 75 chr15 81979336 81979482 -21515492 - MIRb SINE MIR -47 221 80 1 1210 207 0 0 0 chr15 81979532 81979555 -21515419 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1210 1628 47 0 0 chr15 81980239 81980431 -21514543 - B2_Mm1a SINE B2 0 193 2 1 1210 246 364 0 0 chr15 81980472 81980549 -21514425 + ID4 SINE ID 5 81 -2 1 1210 295 250 116 36 chr15 81980559 81980671 -21514303 + PB1 SINE Alu 5 125 -2 1 1210 345 259 24 36 chr15 81980683 81980767 -21514207 + ID4 SINE ID 1 83 0 1 1210 431 326 48 61 chr15 81981007 81981301 -21513673 - B4A SINE B4 -1 291 2 1 1210 279 294 104 66 chr15 81981306 81981326 -21513648 - B2_Mm2 SINE B2 -5 190 2 1 1210 659 248 31 56 chr15 81981326 81981488 -21513486 - RSINE1 SINE B4 -5 160 3 1 1210 369 229 166 0 chr15 81981505 81981624 -21513350 - Lx8 LINE L1 -1 7472 7329 1 1210 384 59 0 0 chr15 81981624 81981675 -21513299 + (TAA)n Simple_repeat Simple_repeat 1 51 0 1 1210 369 229 166 0 chr15 81981675 81981712 -21513262 - Lx8 LINE L1 -145 7328 7291 1 1210 906 172 176 11 chr15 81982072 81982248 -21512726 + B3 SINE B2 1 205 -11 1 1210 189 0 0 0 chr15 81982440 81982461 -21512513 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1210 321 222 2 0 chr15 81982961 81983030 -21511944 - ID4 SINE ID -82 70 1 1 1210 330 282 276 5 chr15 81983170 81983366 -21511608 - L1ME1 LINE L1 -291 5888 5640 1 1210 272 314 67 29 chr15 81983877 81983982 -21510992 - PB1D10 SINE Alu -8 109 1 1 1210 329 235 74 81 chr15 81984071 81984219 -21510755 - ID_B1 SINE B4 -77 147 1 1 1210 1010 108 7 26 chr15 81984522 81984674 -21510300 - B1_Mur3 SINE Alu 0 149 1 1 1210 1152 171 39 0 chr15 81985093 81985298 -21509676 + B3 SINE B2 3 215 -1 1 1210 592 222 118 0 chr15 81985364 81985508 -21509466 + RSINE1 SINE B4 4 164 -1 1 1210 313 250 0 0 chr15 81985511 81985575 -21509399 + B1_Mus2 SINE Alu 33 96 -51 1 1210 941 119 224 17 chr15 81986083 81986262 -21508712 + URR1A DNA MER1_type 5 220 -6 1 1210 566 306 19 58 chr15 81986267 81986472 -21508502 + B3A SINE B2 2 198 0 1 1210 847 168 15 0 chr15 81986503 81986634 -21508340 + B1_Mur2 SINE Alu 1 133 -16 1 1210 304 300 39 85 chr15 81986826 81986979 -21507995 - RSINE1 SINE B4 -16 149 4 1 1210 1200 75 0 0 chr15 81987065 81987212 -21507762 - B1_Mus2 SINE Alu 0 147 1 1 1210 1720 207 41 70 chr15 81987220 81987636 -21507338 - MTD LTR MaLR -14 405 2 1 1210 483 63 0 0 chr15 81987669 81987732 -21507242 + (TCCC)n Simple_repeat Simple_repeat 4 66 0 1 1210 885 152 21 0 chr15 81987750 81987895 -21507079 - B1_Mur3 SINE Alu 0 149 2 1 1210 613 176 34 45 chr15 81989545 81989721 -21505253 - B3 SINE B2 -24 171 1 1 1210 282 278 0 40 chr15 81990608 81990683 -21504291 - ID4_ SINE ID -11 72 1 1 1210 279 294 0 12 chr15 81990695 81990781 -21504193 + CT-rich Low_complexity Low_complexity 3 87 0 1 1210 379 136 0 0 chr15 81991597 81991656 -21503318 - URR1A DNA MER1_type -87 139 81 1 1210 251 291 77 23 chr15 81991656 81991786 -21503188 + MIR SINE MIR 86 222 -40 1 1210 864 129 28 28 chr15 81993067 81993211 -21501763 + B1_Mur4 SINE Alu 7 150 0 1 1210 462 280 64 0 chr15 81993255 81993380 -21501594 + ID_B1 SINE B4 81 213 -11 1 1210 399 293 20 0 chr15 81993599 81993698 -21501276 - RSINE1 SINE B4 -62 103 3 1 1210 835 181 69 110 chr15 81993729 81993947 -21501027 - B3 SINE B2 -6 210 2 1 1210 233 321 0 0 chr15 81993965 81994018 -21500956 - B1F SINE Alu -96 53 1 1 1210 248 246 229 61 chr15 81994335 81994496 -21500478 + B3A SINE B2 1 185 -31 1 1210 483 220 46 0 chr15 81994548 81994657 -21500317 + B3A SINE B2 4 117 -81 1 1210 512 269 0 19 chr15 81995183 81995305 -21499669 - B4A SINE B4 -172 120 2 1 1210 336 178 0 0 chr15 81995307 81995380 -21499594 + CT-rich Low_complexity Low_complexity 1 73 0 1 1210 579 171 248 0 chr15 81995380 81995497 -21499477 - B1_Mus1 SINE Alu 0 148 3 1 1210 21 36 0 0 chr15 81995506 81995534 -21499440 + AT_rich Low_complexity Low_complexity 1 28 0 1 1210 498 296 80 15 chr15 81995560 81995697 -21499277 + RSINE1 SINE B4 3 148 -17 1 1210 618 147 164 20 chr15 81995845 81995991 -21498983 + B3 SINE B2 43 209 -7 1 1210 445 232 231 6 chr15 81996298 81996467 -21498507 + B3 SINE B2 5 211 -5 1 1210 720 238 20 0 chr15 81998101 81998252 -21496722 - RSINE1 SINE B4 -6 159 6 1 1210 421 328 99 44 chr15 81998468 81998650 -21496324 - MER115 DNA Tip100 -468 225 34 1 1210 507 121 19 57 chr15 81998824 81998929 -21496045 - B1F2 SINE Alu -48 101 1 1 1210 553 235 8 8 chr15 81999224 81999344 -21495630 + PB1D9 SINE Alu 1 120 0 1 1210 392 232 0 35 chr15 81999499 81999584 -21495390 + ID4_ SINE ID 2 83 0 1 1210 227 236 17 0 chr15 81999796 81999847 -21495127 + B1F SINE Alu 12 66 -83 1 1210 803 144 49 21 chr15 81999848 81999990 -21494984 - B1_Mur3 SINE Alu -3 146 1 1 1210 294 200 0 44 chr15 82000016 82000084 -21494890 + PB1D10 SINE Alu 53 117 0 1 1210 234 91 0 0 chr15 82000123 82000156 -21494818 + (T)n Simple_repeat Simple_repeat 1 33 0 2 1210 227 245 0 0 chr15 82000436 82000485 -21494489 + (CCCCAG)n Simple_repeat Simple_repeat 1 49 0 3 1210 313 284 117 10 chr15 82001902 82002005 -21492969 + RSINE1 SINE B4 5 118 -47 4 1210 1448 74 21 0 chr15 82002044 82002234 -21492740 + B2_Mm2 SINE B2 2 195 0 5 1210 366 80 0 0 chr15 82002275 82002325 -21492649 + (CTTG)n Simple_repeat Simple_repeat 2 51 0 6 1210 861 123 8 0 chr15 82002331 82002461 -21492513 - B1_Mur4 SINE Alu -9 141 11 7 1210 600 285 38 0 chr15 82002661 82002819 -21492155 - RSINE1 SINE B4 0 165 2 8 1210 234 0 0 0 chr15 82003049 82003075 -21491899 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 9 1210 1041 191 52 5 chr15 82003756 82003966 -21491008 + ID_B1 SINE B4 2 221 -3 1 1210 1436 68 10 40 chr15 82004138 82004336 -21490638 + B2_Mm1t SINE B2 2 193 0 1 1210 310 283 103 9 chr15 82004637 82004744 -21490230 - PB1D10 SINE Alu 0 117 1 1 1210 626 172 28 5 chr15 82004757 82004886 -21490088 - PB1D9 SINE Alu -20 130 2 1 1210 234 91 0 0 chr15 82005250 82005283 -21489691 + (CCCCCG)n Simple_repeat Simple_repeat 3 35 0 1 1210 385 263 53 0 chr15 82005905 82006000 -21488974 + B1F1 SINE Alu 3 102 -47 1 1210 258 32 0 0 chr15 82006001 82006032 -21488942 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 1 1210 539 237 174 6 chr15 82006042 82006220 -21488754 + B3 SINE B2 9 216 0 1 1210 1170 68 0 13 chr15 82006410 82006560 -21488414 - B1_Mus1 SINE Alu 0 148 1 1 1210 21 71 0 0 chr15 82006638 82006680 -21488294 + AT_rich Low_complexity Low_complexity 1 42 0 1 1210 322 333 0 27 chr15 82006781 82006929 -21488045 - MIR SINE MIR -1 261 118 2 1210 1284 244 86 47 chr15 82006994 82007377 -21487597 - RMER10B LTR ERVL 0 398 1 2 1210 440 323 35 29 chr15 82008730 82008902 -21486072 - ID_B1 SINE B4 -17 207 35 2 1210 481 148 0 120 chr15 82008907 82009007 -21485967 - B1_Mur1 SINE Alu -1 148 61 2 1210 225 275 101 0 chr15 82008982 82009051 -21485923 + B3 SINE B2 55 130 -86 2 1210 182 329 62 12 chr15 82010027 82010107 -21484867 - L2b LINE L2 -21 3354 3271 2 1210 548 295 124 25 chr15 82010303 82010626 -21484348 - ORR1E LTR MaLR 0 359 5 2 1210 1005 224 0 5 chr15 82010748 82010767 -21484207 - B3A SINE B2 -1 197 179 2 1210 405 0 0 0 chr15 82010767 82010812 -21484162 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 2 1210 1005 224 0 5 chr15 82010812 82010989 -21483985 - B3A SINE B2 -20 178 3 2 1210 183 374 33 11 chr15 82011329 82011421 -21483553 - L2b LINE L2 -607 2812 2719 2 1210 308 216 153 10 chr15 82012009 82012107 -21482867 + PB1D10 SINE Alu 5 116 -1 2 1210 1031 208 0 14 chr15 82012858 82013068 -21481906 - B3 SINE B2 -7 209 3 3 1210 914 129 29 0 chr15 82013097 82013236 -21481738 + B1_Mus2 SINE Alu 5 147 0 3 1210 354 23 0 0 chr15 82013259 82013302 -21481672 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 3 1210 996 104 8 0 chr15 82013302 82013436 -21481538 - B1_Mus1 SINE Alu -12 136 2 3 1210 376 194 93 37 chr15 82013491 82013598 -21481376 + PB1D7 SINE Alu 7 119 -1 3 1210 482 274 62 0 chr15 82013614 82013760 -21481214 + RSINE1 SINE B4 3 157 -8 3 1210 624 215 82 0 chr15 82014057 82014192 -21480782 + B1_Mus2 SINE Alu 1 146 -1 3 1210 328 305 295 64 chr15 82015342 82015610 -21479364 - ORR1E LTR MaLR -38 341 12 3 1210 766 263 37 31 chr15 82015926 82016194 -21478780 - ORR1E LTR MaLR -83 296 3 3 1210 362 259 11 45 chr15 82017304 82017393 -21477581 + PB1 SINE Alu 37 122 -5 3 1210 1088 145 48 11 chr15 82017889 82018077 -21476897 + B2_Mm2 SINE B2 1 195 0 4 1210 267 242 0 31 chr15 82018087 82018151 -21476823 + MT2B LTR ERVL 196 257 -344 4 1210 534 167 0 0 chr15 82018096 82018180 -21476794 + B1_Mus2 SINE Alu 48 131 -16 4 1210 324 289 8 32 chr15 82018245 82018370 -21476604 - MER119 DNA MER1_type -90 493 372 4 1210 227 254 63 0 chr15 82018395 82018458 -21476516 - B3 SINE B2 0 216 150 4 1210 268 120 38 57 chr15 82018474 82018527 -21476447 - B3 SINE B2 -163 53 2 4 1210 207 100 0 0 chr15 82018540 82018570 -21476404 + (GTTTG)n Simple_repeat Simple_repeat 5 34 0 4 1210 688 214 0 40 chr15 82018570 82018721 -21476253 - B1_Mur2 SINE Alu 0 149 5 4 1210 471 330 36 91 chr15 82018772 82019079 -21475895 - MER119 DNA MER1_type -280 303 14 4 1210 286 263 62 21 chr15 82019415 82019512 -21475462 + B3 SINE B2 78 178 -38 4 1210 580 189 28 0 chr15 82019535 82019641 -21475333 + PB1D9 SINE Alu 3 111 -9 4 1210 180 77 0 0 chr15 82019649 82019675 -21475299 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 1210 357 82 0 0 chr15 82019956 82020005 -21474969 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1210 294 299 0 11 chr15 82020281 82020369 -21474605 - ALINE LINE RTE -430 187 101 5 1210 387 0 0 0 chr15 82020738 82020781 -21474193 + (GTTTG)n Simple_repeat Simple_repeat 2 44 0 5 1210 530 178 61 47 chr15 82020781 82020908 -21474066 - B1_Mur4 SINE Alu -11 139 14 5 1210 372 43 0 0 chr15 82021030 82021076 -21473898 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1210 409 198 69 0 chr15 82021490 82021591 -21473383 + B3A SINE B2 1 108 -90 5 1210 401 262 94 86 chr15 82021676 82021931 -21473043 + RMER17C LTR ERVK 138 394 -16 5 1210 180 176 0 0 chr15 82024043 82024077 -21470897 + T-rich Low_complexity Low_complexity 1 34 0 5 1210 370 273 92 13 chr15 82024090 82024242 -21470732 - RSINE1 SINE B4 0 165 2 5 1210 1030 109 13 13 chr15 82026171 82026320 -21468654 + B1_Mur4 SINE Alu 2 150 0 6 1210 285 29 0 0 chr15 82027115 82027149 -21467825 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1210 527 303 30 0 chr15 82027150 82027282 -21467692 - RSINE1 SINE B4 -23 142 7 6 1210 322 278 102 1 chr15 82029485 82029605 -21465369 - MIRm SINE MIR -47 161 35 6 1210 426 274 10 19 chr15 82030864 82030968 -21464006 - B1_Mus1 SINE Alu -45 103 1 6 1210 403 376 130 3 chr15 82031258 82031597 -21463377 - Lx8 LINE L1 -73 7400 7019 6 1210 743 289 16 5 chr15 82031864 82031931 -21463043 + ID_B1 SINE B4 22 214 -10 6 1210 324 319 35 56 chr15 82031931 82032055 -21462919 + B1_Mur4 SINE Alu 10 131 -19 6 1210 1422 70 43 5 chr15 82032055 82032242 -21462732 + B2_Mm2 SINE B2 2 195 0 6 1210 324 319 35 56 chr15 82032242 82032260 -21462714 + B1_Mur4 SINE Alu 132 149 -1 6 1210 415 192 0 0 chr15 82032437 82032510 -21462464 + PB1D10 SINE Alu 36 108 -9 6 1210 305 275 12 0 chr15 82032518 82032598 -21462376 + ID4 SINE ID 3 83 0 7 1210 663 255 6 36 chr15 82032671 82032838 -21462136 + RSINE1 SINE B4 4 165 0 7 1210 735 200 7 0 chr15 82032862 82032997 -21461977 + B1_Mur1 SINE Alu 6 141 -8 7 1210 498 17 0 0 chr15 82033106 82033165 -21461809 + (TG)n Simple_repeat Simple_repeat 1 59 0 7 1210 250 333 0 0 chr15 82033200 82033266 -21461708 - RMER30 DNA MER1_type -127 75 10 7 1210 25 0 0 0 chr15 82035069 82035094 -21459880 + AT_rich Low_complexity Low_complexity 1 25 0 7 1210 857 223 10 50 chr15 82039138 82039268 -21455706 - B3 SINE B2 0 216 94 7 1210 1221 151 53 58 chr15 82039268 82039493 -21455481 - URR1B DNA MER1_type 0 225 2 7 1210 857 223 10 50 chr15 82039493 82039560 -21455414 - B3 SINE B2 -123 93 27 7 1210 1215 28 7 7 chr15 82039585 82039731 -21455243 - B1_Mm SINE Alu 0 147 2 7 1210 540 143 0 0 chr15 82040025 82040123 -21454851 + (TCC)n Simple_repeat Simple_repeat 3 100 0 7 1210 27 73 0 0 chr15 82042442 82042497 -21452477 + GC_rich Low_complexity Low_complexity 1 55 0 8 1210 204 143 0 0 chr15 82043273 82043315 -21451659 + (GGGA)n Simple_repeat Simple_repeat 1 42 0 8 1210 444 19 0 0 chr15 82043571 82043624 -21451350 + (CA)n Simple_repeat Simple_repeat 1 53 0 8 1210 1206 74 0 0 chr15 82044096 82044244 -21450730 + B1_Mus1 SINE Alu 1 148 0 8 1210 204 67 0 0 chr15 82044244 82044274 -21450700 + (A)n Simple_repeat Simple_repeat 1 30 0 8 1210 348 214 70 110 chr15 82044325 82044425 -21450549 + PB1 SINE Alu 41 149 0 8 1210 951 135 43 0 chr15 82044493 82044656 -21450318 - URR1A DNA MER1_type 0 226 57 8 1210 288 285 5 0 chr15 82044654 82044736 -21450238 + B1_Mur1 SINE Alu 63 148 -1 8 1210 413 225 8 98 chr15 82044709 82044832 -21450142 + MT2B LTR ERVL 153 264 -337 8 1210 985 31 0 30 chr15 82044738 82044871 -21450103 + B1_Mus1 SINE Alu 20 148 0 8 1210 234 150 0 0 chr15 82044874 82044914 -21450060 + (A)n Simple_repeat Simple_repeat 1 40 0 9 1210 803 47 19 0 chr15 82044919 82045026 -21449948 + (GGGAA)n Simple_repeat Simple_repeat 3 111 0 9 1210 236 240 0 0 chr15 82045073 82045123 -21449851 + ID_B1 SINE B4 174 223 -1 9 1210 305 244 62 25 chr15 82048034 82048114 -21446860 + ID4 SINE ID 1 83 0 9 1210 397 34 0 33 chr15 82048115 82048176 -21446798 + B1_Mm SINE Alu 89 147 0 9 1210 530 124 11 0 chr15 82048177 82048266 -21446708 + (GAAA)n Simple_repeat Simple_repeat 2 91 0 9 1210 463 235 109 0 chr15 82048266 82048385 -21446589 + ID_B1 SINE B4 80 211 -13 9 1210 219 36 0 0 chr15 82048385 82048413 -21446561 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 9 1210 241 60 19 57 chr15 82048420 82048473 -21446501 + (CAA)n Simple_repeat Simple_repeat 1 51 0 9 1210 1483 45 17 0 chr15 82048836 82049013 -21445961 - B2_Mm2 SINE B2 -14 181 2 9 1210 860 244 104 0 chr15 82049045 82049246 -21445728 - ID_B1 SINE B4 0 224 3 1 1210 276 77 0 0 chr15 82049323 82049362 -21445612 + (CGTG)n Simple_repeat Simple_repeat 1 39 0 1 1210 494 238 23 45 chr15 82049971 82050103 -21444871 - RSINE1 SINE B4 -25 140 12 1 1210 270 0 0 0 chr15 82050563 82050593 -21444381 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1210 1107 78 0 21 chr15 82050604 82050748 -21444226 - B1_Mus1 SINE Alu -7 141 1 1 1210 210 194 106 61 chr15 82050792 82050858 -21444116 + MIR3 SINE MIR 114 182 -26 1 1211 307 286 0 42 chr15 82052266 82052361 -21442613 - MLT1A1 LTR MaLR 0 408 318 1 1211 38 51 0 0 chr15 82052531 82052590 -21442384 + AT_rich Low_complexity Low_complexity 1 59 0 1 1211 826 179 14 0 chr15 82052601 82052741 -21442233 - B1_Mur1 SINE Alu -3 146 5 1 1211 567 311 43 21 chr15 82052744 82052768 -21442206 - B3A SINE B2 -5 193 173 1 1211 342 45 0 0 chr15 82052768 82052812 -21442162 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1211 567 311 43 21 chr15 82052812 82052974 -21442000 - B3A SINE B2 -26 172 3 1 1211 402 115 0 0 chr15 82052994 82053055 -21441919 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 1211 471 270 72 26 chr15 82053067 82053219 -21441755 - B3A SINE B2 -38 160 2 1 1211 397 127 0 25 chr15 82054402 82054483 -21440491 + G-rich Low_complexity Low_complexity 2 80 0 1 1211 384 22 0 0 chr15 82057012 82057057 -21437917 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1211 309 197 0 53 chr15 82057291 82057366 -21437608 + BC1_Mm scRNA scRNA 5 75 -77 1 1211 564 230 158 27 chr15 82057307 82057490 -21437484 + ID_B1 SINE B4 18 224 0 1 1211 744 71 0 0 chr15 82057568 82057667 -21437307 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 1 1211 1054 43 0 115 chr15 82057667 82057823 -21437151 - B1_Mus2 SINE Alu -8 139 2 1 1211 334 109 0 35 chr15 82058065 82058122 -21436852 - B2_Mm2 SINE B2 -94 101 47 1 1211 1125 92 92 0 chr15 82058135 82058299 -21436675 - B2_Mm1t SINE B2 -14 179 1 1 1211 212 0 36 0 chr15 82058368 82058396 -21436578 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1 1211 1174 62 0 14 chr15 82058414 82058562 -21436412 + B1_Mm SINE Alu 2 147 0 1 1211 1576 39 0 6 chr15 82058578 82058760 -21436214 - B2_Mm2 SINE B2 -14 181 1 1 1211 21 36 0 0 chr15 82058764 82058792 -21436182 + AT_rich Low_complexity Low_complexity 1 28 0 1 1211 485 280 8 0 chr15 82058795 82058913 -21436061 - PB1 SINE Alu -8 119 1 1 1211 258 269 0 69 chr15 82059042 82059114 -21435860 + PB1D10 SINE Alu 40 106 -11 1 1211 435 183 287 0 chr15 82059292 82059407 -21435567 + B1_Mus1 SINE Alu 1 148 0 1 1211 1211 55 0 7 chr15 82059425 82059571 -21435403 + B1_Mm SINE Alu 2 146 -1 1 1211 276 258 113 41 chr15 82059645 82059742 -21435232 - ID_B1 SINE B4 -21 203 100 1 1211 245 179 57 114 chr15 82059723 82059811 -21435163 - B1_Mm SINE Alu -42 105 23 1 1211 238 226 119 0 chr15 82061223 82061307 -21433667 + B4A SINE B4 188 281 -11 1 1211 432 234 206 0 chr15 82061460 82061567 -21433407 - RSINE1 SINE B4 -29 136 8 1 1211 275 271 43 0 chr15 82061580 82061650 -21433324 - ID_B1 SINE B4 -5 219 147 1 1211 243 0 0 0 chr15 82061650 82061677 -21433297 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 1211 252 0 0 0 chr15 82061677 82061704 -21433270 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1211 310 227 45 0 chr15 82061706 82061772 -21433202 - ID_B1 SINE B4 -13 211 143 1 1211 588 14 0 0 chr15 82061776 82061845 -21433129 + (CA)n Simple_repeat Simple_repeat 1 69 0 1 1211 763 150 109 29 chr15 82063409 82063546 -21431428 + B1_Mur3 SINE Alu 2 149 0 1 1211 863 139 0 0 chr15 82063886 82064015 -21430959 + B1_Mus1 SINE Alu 2 130 -18 1 1211 1206 28 14 7 chr15 82064040 82064185 -21430789 - B1_Mus1 SINE Alu 0 148 3 1 1211 21 0 0 0 chr15 82064190 82064211 -21430763 + AT_rich Low_complexity Low_complexity 1 21 0 1 1211 348 299 180 51 chr15 82065447 82065941 -21429033 + L2 LINE L2 2501 3058 -361 1 1211 489 168 208 0 chr15 82066483 82066608 -21428366 - URR1A DNA MER1_type 0 226 76 1 1211 645 134 152 0 chr15 82066940 82067052 -21427922 + B1_Mus1 SINE Alu 2 130 -18 1 1211 410 283 83 8 chr15 82067055 82067176 -21427798 - RSINE1 SINE B4 -32 133 4 1 1211 761 278 45 15 chr15 82067711 82067912 -21427062 - B3 SINE B2 -8 208 2 1 1211 1986 129 191 13 chr15 82068015 82068045 -21426929 + RMER4A LTR ERVK 5 31 -435 1 1211 890 90 15 0 chr15 82068045 82068178 -21426796 + (GAAA)n Simple_repeat Simple_repeat 3 137 0 1 1211 1986 129 191 13 chr15 82068178 82068539 -21426435 + RMER4A LTR ERVK 32 465 -1 1 1211 571 263 114 69 chr15 82068857 82069102 -21425872 + B4A SINE B4 15 270 -22 1 1211 300 234 0 0 chr15 82069857 82069921 -21425053 - B1_Mus1 SINE Alu -84 64 1 1 1211 753 214 78 48 chr15 82069941 82070147 -21424827 + B3 SINE B2 1 212 -4 1 1211 189 0 0 0 chr15 82070147 82070168 -21424806 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1 1211 438 235 47 120 chr15 82070502 82070652 -21424322 - B3A SINE B2 0 198 60 1 1211 1113 216 9 14 chr15 82070796 82071012 -21423962 + B3 SINE B2 2 216 0 1 1211 701 259 6 18 chr15 82071358 82071527 -21423447 + B3 SINE B2 14 180 -36 1 1211 256 368 12 31 chr15 82072218 82072248 -21422726 - YREP_Mm Unknown Unknown -1468 344 231 1 1211 801 124 0 0 chr15 82072248 82072369 -21422605 + B1_Mus2 SINE Alu 2 122 -25 1 1211 406 229 54 18 chr15 82072529 82072640 -21422334 - ID_B1 SINE B4 -23 201 87 1 1211 208 91 22 22 chr15 82072718 82072731 -21422243 + (GAAAA)n Simple_repeat Simple_repeat 4 17 0 1 1211 1255 34 0 7 chr15 82072731 82072880 -21422094 + B1_Mus1 SINE Alu 1 148 0 1 1211 208 91 22 22 chr15 82072880 82072911 -21422063 + (GAAAA)n Simple_repeat Simple_repeat 3 33 0 1 1211 1626 47 0 15 chr15 82073059 82073255 -21421719 + B2_Mm1t SINE B2 1 193 0 1 1211 276 297 44 0 chr15 82073455 82073546 -21421428 - L2a LINE L2 -18 3408 3314 1 1211 410 252 77 17 chr15 82073582 82073699 -21421275 - ID_B1 SINE B4 -2 222 99 1 1211 966 259 81 89 chr15 82073762 82073848 -21421126 + MTE2a LTR MaLR 1 79 -300 1 1211 991 97 115 0 chr15 82073848 82074013 -21420961 - B2_Mm2 SINE B2 -9 186 3 1 1211 966 259 81 89 chr15 82074013 82074308 -21420666 + MTE2a LTR MaLR 80 379 0 1 1211 207 0 0 0 chr15 82075252 82075275 -21419699 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1211 315 79 855 0 chr15 82075275 82075351 -21419623 - B1_Mm SINE Alu -5 142 2 1 1211 1394 81 27 0 chr15 82075411 82075596 -21419378 - B2_Mm1t SINE B2 -3 190 1 1 1211 501 254 54 98 chr15 82075602 82075807 -21419167 - B3A SINE B2 0 198 3 1 1211 22 56 0 0 chr15 82075845 82075881 -21419093 + AT_rich Low_complexity Low_complexity 1 36 0 1 1211 636 206 106 28 chr15 82075881 82076061 -21418913 - B3 SINE B2 -4 212 19 1 1211 262 241 183 33 chr15 82076065 82076185 -21418789 + RLTR19-int LTR ERVK 2684 2821 -417 1 1211 1763 142 29 50 chr15 82076187 82076527 -21418447 - RLTR23 LTR ERV1 0 430 98 1 1211 189 0 0 0 chr15 82076533 82076554 -21418420 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1 1211 181 57 57 0 chr15 82076547 82076582 -21418392 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 1 1211 1033 49 25 117 chr15 82076582 82076744 -21418230 - B1_Mus2 SINE Alu 0 147 1 1 1211 569 88 154 0 chr15 82076816 82076907 -21418067 - RLTR23 LTR ERV1 -325 105 1 1 1211 935 196 113 53 chr15 82076917 82077164 -21417810 + RLTR19-int LTR ERVK 4024 4285 -1852 1 1211 268 308 21 42 chr15 82077171 82077266 -21417708 + B4A SINE B4 186 278 -14 1 1211 1097 69 21 0 chr15 82077304 82077448 -21417526 + B1_Mm SINE Alu 1 147 0 1 1211 249 248 252 17 chr15 82077540 82077659 -21417315 - RMER21B LTR ERV1 -277 565 419 1 1211 565 129 13 7 chr15 82077802 82077903 -21417071 + B1_Mus2 SINE Alu 22 146 -1 1 1211 738 242 130 37 chr15 82077904 82078119 -21416855 - RodERV21-int LTR ERV1 -317 4674 4440 1 1211 609 33 122 0 chr15 82078264 82078354 -21416620 + B2_Mm2 SINE B2 81 181 -14 1 1211 329 312 46 46 chr15 82078522 82078541 -21416433 - B3A SINE B2 -67 131 1 1 1211 456 243 71 9 chr15 82078541 82078653 -21416321 - B4A SINE B4 -173 119 1 1 1211 380 111 0 16 chr15 82078804 82078868 -21416106 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 1 1211 298 226 269 19 chr15 82078869 82078977 -21415997 - B1F2 SINE Alu -12 137 3 1 1211 203 104 0 77 chr15 82079471 82079494 -21415480 + T-rich Low_complexity Low_complexity 28 49 0 1 1211 1044 57 49 21 chr15 82079494 82079638 -21415336 - B1_Mus1 SINE Alu 0 148 1 1 1211 203 104 0 77 chr15 82079638 82079666 -21415308 + T-rich Low_complexity Low_complexity 2 27 0 1 1211 278 221 132 0 chr15 82079710 82079778 -21415196 - B1F SINE Alu -68 81 5 1 1211 631 288 12 24 chr15 82079830 82079994 -21414980 - RSINE1 SINE B4 -1 164 3 1 1211 1124 48 13 27 chr15 82080029 82080178 -21414796 - B1_Mus1 SINE Alu -1 147 1 1 1211 1802 170 70 11 chr15 82080357 82080653 -21414321 - Lx5 LINE L1 0 7050 6737 1 1211 234 0 0 0 chr15 82080653 82080679 -21414295 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1211 1802 184 75 11 chr15 82080679 82080757 -21414217 - Lx5 LINE L1 -243 6757 6673 1 1211 317 340 21 0 chr15 82080870 82080967 -21414007 - LTR40c LTR ERVL -19 443 345 1 1211 1060 229 14 0 chr15 82080999 82081217 -21413757 + ID_B1 SINE B4 2 222 -2 1 1211 2051 118 16 110 chr15 82081295 82081677 -21413297 - ORR1A1 LTR MaLR 0 346 1 1 1211 948 156 0 26 chr15 82081714 82081865 -21413109 - B1_Mus1 SINE Alu 0 148 2 1 1211 463 232 87 8 chr15 82081895 82082021 -21412953 - LTR40c LTR ERVL -286 179 44 1 1211 354 23 0 0 chr15 82082056 82082099 -21412875 + (TC)n Simple_repeat Simple_repeat 1 43 0 2 1211 716 271 55 5 chr15 82082120 82082320 -21412654 - B3 SINE B2 -6 210 1 2 1211 879 201 0 0 chr15 82082345 82082494 -21412480 - B1_Mur2 SINE Alu 0 149 1 2 1211 215 246 211 16 chr15 82082504 82082632 -21412342 + L2c LINE L2 3234 3386 -1 2 1211 1680 150 62 45 chr15 82083715 82084051 -21410923 - RMER10B LTR ERVL -38 360 19 2 1211 189 107 0 0 chr15 82084119 82084147 -21410827 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1211 964 153 0 26 chr15 82084147 82084301 -21410673 - B1_Mur4 SINE Alu 0 150 1 2 1211 1187 55 7 0 chr15 82084320 82084465 -21410509 + B1_Mus1 SINE Alu 2 147 -1 2 1211 1981 131 57 41 chr15 82084773 82085140 -21409834 + RMER10B LTR ERVL 19 391 -7 2 1211 406 238 109 0 chr15 82085151 82085252 -21409722 + B1_Mur2 SINE Alu 30 141 -8 2 1211 463 227 43 52 chr15 82085351 82085467 -21409507 + RSINE1 SINE B4 15 129 -36 2 1211 212 238 53 106 chr15 82086931 82087025 -21407949 - MIR3 SINE MIR -38 170 82 2 1211 189 0 0 0 chr15 82088099 82088120 -21406854 + (CA)n Simple_repeat Simple_repeat 1 21 0 2 1211 1016 214 113 33 chr15 82088135 82088410 -21406564 - ORR1D1 LTR MaLR -71 303 7 2 1211 850 235 98 0 chr15 82088592 82088796 -21406178 + ID_B1 SINE B4 1 224 0 2 1211 1080 58 65 0 chr15 82088831 82088969 -21406005 - B1_Mus1 SINE Alu -1 147 1 2 1211 195 42 0 0 chr15 82089600 82089624 -21405350 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 2 1211 1297 14 0 0 chr15 82089624 82089769 -21405205 - B1_Mm SINE Alu -2 145 1 2 1211 484 176 38 0 chr15 82090761 82090892 -21404082 + GA-rich Low_complexity Low_complexity 1 136 0 2 1211 738 137 3 4 chr15 82091420 82091565 -21403409 - B1_Mus1 SINE Alu 0 149 6 2 1211 535 327 14 27 chr15 82091565 82091640 -21403334 - ID_B1 SINE B4 0 224 8 2 1211 259 272 48 36 chr15 82091774 82091858 -21403116 - ID_B1 SINE B4 -16 208 124 2 1211 2346 152 84 36 chr15 82091947 82092445 -21402529 - RLTR24 LTR ERV1 -2 527 6 2 1211 344 329 32 32 chr15 82092623 82092780 -21402194 + MER102b DNA MER1_type 29 185 -156 2 1211 355 338 60 8 chr15 82093154 82093288 -21401686 + ID_B1 SINE B4 2 142 -82 2 1211 251 312 0 0 chr15 82093231 82093295 -21401679 + B1_Mus1 SINE Alu 6 69 -79 2 1211 856 153 0 12 chr15 82093383 82093555 -21401419 + (CAT)n Simple_repeat Simple_repeat 1 170 0 2 1211 966 116 0 0 chr15 82093555 82093702 -21401272 + (TCCCC)n Simple_repeat Simple_repeat 4 150 0 2 1211 533 115 231 0 chr15 82093704 82093808 -21401166 - B1_Mus1 SINE Alu -20 128 1 2 1211 1143 83 60 11 chr15 82094022 82094186 -21400788 + B2_Mm1a SINE B2 2 172 -21 2 1211 198 0 0 0 chr15 82094186 82094208 -21400766 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 1211 1143 83 60 11 chr15 82094208 82094226 -21400748 + B2_Mm1a SINE B2 173 193 0 2 1211 225 301 48 19 chr15 82094304 82094409 -21400565 - L2c LINE L2 -222 3165 3058 2 1211 662 82 10 0 chr15 82094509 82094607 -21400367 + (TTCC)n Simple_repeat Simple_repeat 2 100 0 2 1211 812 169 35 0 chr15 82094645 82094787 -21400187 - B1_Mur3 SINE Alu -2 147 1 2 1211 762 118 114 38 chr15 82095290 82095422 -21399552 + B1_Mus2 SINE Alu 5 146 -1 2 1211 915 269 108 0 chr15 82095438 82095687 -21399287 + B4A SINE B4 3 278 -14 2 1211 1224 73 92 0 chr15 82095983 82096147 -21398827 - B2_Mm2 SINE B2 -14 181 3 2 1211 273 219 0 0 chr15 82096174 82096247 -21398727 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 1211 254 336 43 17 chr15 82096426 82096541 -21398433 + MLT1I LTR MaLR 8 125 -286 2 1211 1133 269 132 124 chr15 82097077 82097131 -21397843 + RCHARR1 DNA MER1_type 46 87 -887 2 1211 1085 82 0 7 chr15 82097131 82097278 -21397696 - B1_Mm SINE Alu 0 147 2 2 1211 1133 269 132 124 chr15 82097278 82098068 -21396906 + RCHARR1 DNA MER1_type 88 897 -77 2 1211 265 342 13 0 chr15 82098070 82098146 -21396828 - ID4_ SINE ID -2 81 5 2 1211 315 325 35 0 chr15 82098155 82098269 -21396705 + RCHARR1 DNA MER1_type 842 959 -15 2 1211 525 142 296 17 chr15 82098508 82098623 -21396351 - B1_Mur4 SINE Alu -2 148 2 2 1211 711 215 135 6 chr15 82099052 82099230 -21395744 - MER3 DNA MER1_type -4 205 5 2 1211 187 255 39 0 chr15 82099464 82099515 -21395459 + L2b LINE L2 3305 3357 -18 2 1211 309 68 0 0 chr15 82100353 82100397 -21394577 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1211 197 140 0 23 chr15 82100750 82100794 -21394180 + C-rich Low_complexity Low_complexity 1 43 0 2 1211 312 27 0 0 chr15 82103509 82103546 -21391428 + (CTG)n Simple_repeat Simple_repeat 2 38 0 2 1211 729 88 0 0 chr15 82103544 82103646 -21391328 + (TTC)n Simple_repeat Simple_repeat 2 103 0 2 1211 1225 61 0 0 chr15 82103647 82103794 -21391180 - B1_Mm SINE Alu 0 147 1 2 1211 435 214 0 0 chr15 82103862 82103946 -21391028 + B1_Mur3 SINE Alu 53 136 -13 2 1211 234 0 0 0 chr15 82104104 82104130 -21390844 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1211 237 152 0 132 chr15 82104556 82104624 -21390350 - B1_Mur2 SINE Alu -23 124 67 2 1211 467 148 127 18 chr15 82104669 82104779 -21390195 - B1_Mur2 SINE Alu -26 123 2 2 1211 180 308 93 0 chr15 82105259 82105366 -21389608 - MIRc SINE MIR -123 145 29 2 1211 245 213 35 44 chr15 82105652 82105802 -21389172 + G-rich Low_complexity Low_complexity 1 148 0 2 1211 195 162 0 0 chr15 82106385 82106422 -21388552 + T-rich Low_complexity Low_complexity 1 37 0 2 1211 267 273 33 33 chr15 82107071 82107089 -21387885 - L2c LINE L2 -4 3383 3366 2 1211 342 0 0 0 chr15 82107089 82107127 -21387847 + (TCCA)n Simple_repeat Simple_repeat 4 41 0 2 1211 267 273 33 33 chr15 82107127 82107199 -21387775 - L2c LINE L2 -22 3365 3293 2 1211 231 286 28 101 chr15 82108631 82108740 -21386234 - MIRm SINE MIR -111 165 65 2 1211 411 320 101 22 chr15 82109301 82109480 -21385494 + MER20 DNA MER1_type 26 218 -1 2 1211 233 292 11 53 chr15 82109512 82109606 -21385368 + B3A SINE B2 108 197 -1 2 1211 251 362 78 26 chr15 82109610 82109763 -21385211 + MIR3 SINE MIR 43 203 -5 2 1211 1451 71 38 0 chr15 82110377 82110561 -21384413 - B2_Mm2 SINE B2 -4 191 1 2 1211 309 297 138 0 chr15 82110718 82110863 -21384111 + L2 LINE L2 2560 2724 -695 2 1211 1658 47 0 0 chr15 82111731 82111923 -21383051 - B2_Mm1t SINE B2 0 193 2 2 1211 761 254 114 75 chr15 82112156 82112437 -21382537 + B4A SINE B4 1 292 0 2 1211 423 203 11 48 chr15 82112470 82112656 -21382318 + (CATA)n Simple_repeat Simple_repeat 1 179 0 2 1211 229 198 10 40 chr15 82112697 82112797 -21382177 + (CATA)n Simple_repeat Simple_repeat 2 98 0 2 1211 261 83 0 0 chr15 82112801 82112837 -21382137 + (TATATG)n Simple_repeat Simple_repeat 6 41 0 2 1211 238 212 149 15 chr15 82112985 82113052 -21381922 + BC1_Mm scRNA scRNA 1 76 -76 2 1211 210 71 0 0 chr15 82113654 82113682 -21381292 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1211 237 33 0 0 chr15 82113837 82113867 -21381107 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1211 2272 84 32 0 chr15 82114467 82114776 -21380198 - ORR1A3 LTR MaLR 0 326 8 2 1211 469 220 35 21 chr15 82115573 82115687 -21379287 - B1F SINE Alu 0 149 33 2 1211 237 267 0 0 chr15 82117293 82117338 -21377636 + MIR3 SINE MIR 118 162 -46 2 1211 473 316 8 25 chr15 82117405 82117525 -21377449 + RSINE1 SINE B4 17 134 -31 2 1211 384 59 0 0 chr15 82117547 82117598 -21377376 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1211 1202 75 0 0 chr15 82117993 82118139 -21376835 - B1_Mm SINE Alu 0 147 2 2 1211 643 226 16 8 chr15 82118203 82118328 -21376646 - RSINE1 SINE B4 -17 148 23 2 1211 243 0 0 0 chr15 82118475 82118502 -21376472 + (TC)n Simple_repeat Simple_repeat 1 27 0 2 1211 285 125 0 0 chr15 82118502 82118557 -21376417 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 1211 328 247 0 80 chr15 82118602 82118690 -21376284 - ID2 SINE ID -1 82 2 2 1211 972 67 88 15 chr15 82118713 82118850 -21376124 - B1_Mus2 SINE Alu 0 147 1 2 1211 1311 86 43 0 chr15 82119975 82120161 -21374813 - B2_Mm2 SINE B2 0 195 2 2 1211 284 281 16 0 chr15 82120162 82120226 -21374748 - ID_B1 SINE B4 -68 156 92 2 1211 213 231 0 0 chr15 82120665 82120704 -21374270 + A-rich Low_complexity Low_complexity 5 43 0 2 1211 647 134 14 14 chr15 82121437 82121581 -21373393 + (TG)n Simple_repeat Simple_repeat 2 145 0 2 1211 1002 228 69 0 chr15 82122301 82122503 -21372471 + B3 SINE B2 1 216 0 2 1211 701 242 18 47 chr15 82125383 82125552 -21369422 + RSINE1 SINE B4 2 165 0 2 1211 471 232 21 10 chr15 82125566 82125662 -21369312 + B4A SINE B4 1 97 -195 2 1211 3567 176 109 39 chr15 82125662 82125786 -21369188 + RMER1B Other Other 8 124 -942 2 1211 1181 44 0 0 chr15 82125786 82125923 -21369051 + B1_Mm SINE Alu 1 137 -10 2 1211 269 26 26 0 chr15 82125923 82125961 -21369013 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2 1211 3567 176 109 39 chr15 82125961 82126700 -21368274 + RMER1B Other Other 125 931 -135 2 1211 345 181 60 8 chr15 82126702 82126836 -21368138 + (TA)n Simple_repeat Simple_repeat 1 141 0 2 1211 55 40 0 0 chr15 82126864 82126940 -21368034 + AT_rich Low_complexity Low_complexity 1 76 0 2 1211 555 83 89 27 chr15 82126947 82127059 -21367915 + RMER1B Other Other 943 1061 -5 2 1211 391 270 169 12 chr15 82127083 82127224 -21367750 + B4A SINE B4 145 292 0 2 1211 2233 137 84 43 chr15 82127395 82127836 -21367138 - RMER6B LTR ERVK -2 459 1 2 1211 1283 83 5 98 chr15 82128200 82128233 -21366741 - B2_Mm2 SINE B2 0 195 164 2 1211 1301 27 0 0 chr15 82128233 82128379 -21366595 + B1_Mm SINE Alu 2 147 0 2 1211 1283 83 5 98 chr15 82128379 82128559 -21366415 - B2_Mm2 SINE B2 -32 163 2 2 1211 1014 136 7 0 chr15 82128610 82128757 -21366217 + B1_Mur2 SINE Alu 2 149 0 2 1211 520 163 0 33 chr15 82130240 82130347 -21364627 + B1_Mur2 SINE Alu 45 148 -1 2 1211 228 35 0 0 chr15 82130609 82130638 -21364336 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1211 765 0 0 0 chr15 82131188 82131273 -21363701 + (TTTC)n Simple_repeat Simple_repeat 4 88 0 3 1211 1265 28 0 0 chr15 82131275 82131416 -21363558 - B1_Mus2 SINE Alu -6 141 1 3 1211 618 296 19 6 chr15 82131896 82132056 -21362918 - RSINE1 SINE B4 -2 163 2 3 1211 1225 41 7 0 chr15 82132870 82133016 -21361958 + B1_Mus2 SINE Alu 1 147 0 3 1211 250 299 0 0 chr15 82133196 82133263 -21361711 + B3A SINE B2 2 68 -130 3 1211 2375 24 3 3 chr15 82133255 82133553 -21361421 - RLTRETN_Mm LTR ERVK -22 371 1 3 1211 325 296 21 120 chr15 82133556 82133698 -21361276 + B3A SINE B2 66 193 -5 3 1211 486 173 58 2 chr15 82133734 82133829 -21361145 + PB1D10 SINE Alu 20 117 0 3 1211 2006 146 79 3 chr15 82134229 82134558 -21360416 + ORR1B2 LTR MaLR 5 358 -9 3 1211 1035 180 75 0 chr15 82134573 82134773 -21360201 - B3 SINE B2 0 216 2 3 1211 279 226 37 19 chr15 82134841 82134949 -21360025 + (TG)n Simple_repeat Simple_repeat 1 110 0 3 1211 242 109 43 0 chr15 82135535 82135581 -21359393 + CT-rich Low_complexity Low_complexity 3 50 0 3 1211 243 0 0 0 chr15 82135694 82135721 -21359253 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 3 1211 186 133 0 0 chr15 82135723 82135753 -21359221 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1211 352 164 49 0 chr15 82135991 82136052 -21358922 - B1_Mur4 SINE Alu -86 64 1 3 1211 245 203 0 92 chr15 82135996 82136061 -21358913 - ID_B1 SINE B4 -89 135 77 3 1211 3440 40 2 0 chr15 82137013 82137412 -21357562 - MTB LTR MaLR 0 400 1 3 1211 363 136 0 0 chr15 82138100 82138159 -21356815 + (T)n Simple_repeat Simple_repeat 1 59 0 3 1211 1400 74 5 36 chr15 82138484 82138680 -21356294 + B2_Mm2 SINE B2 2 191 -4 3 1211 665 248 15 0 chr15 82139883 82140020 -21354954 + B3A SINE B2 1 139 -59 3 1211 216 97 0 0 chr15 82140035 82140066 -21354908 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1211 635 191 0 73 chr15 82140085 82140209 -21354765 + B1_Mur2 SINE Alu 5 119 -30 3 1211 600 14 0 0 chr15 82140209 82140278 -21354696 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 1211 22 35 0 0 chr15 82140281 82140310 -21354664 + AT_rich Low_complexity Low_complexity 1 29 0 3 1211 743 210 21 0 chr15 82140437 82140580 -21354394 - ID_B1 SINE B4 0 224 79 3 1211 413 267 57 16 chr15 82140575 82140697 -21354277 - B1F SINE Alu -8 141 15 3 1211 202 256 12 0 chr15 82140697 82140739 -21354235 + T-rich Low_complexity Low_complexity 42 84 0 3 1211 699 212 106 0 chr15 82140739 82140871 -21354103 - RSINE1 SINE B4 -17 148 3 3 1211 202 256 12 0 chr15 82140871 82140910 -21354064 + T-rich Low_complexity Low_complexity 3 41 0 3 1211 610 272 81 0 chr15 82140911 82141047 -21353927 - B1_Mur1 SINE Alu -2 147 1 3 1211 383 317 122 0 chr15 82141128 82141308 -21353666 - L1MCb LINE L1 -5090 955 754 3 1211 925 130 8 0 chr15 82141530 82141661 -21353313 - B1_Mus1 SINE Alu -16 132 1 3 1211 23 33 0 0 chr15 82141797 82141827 -21353147 + AT_rich Low_complexity Low_complexity 1 30 0 3 1211 2191 127 9 6 chr15 82141827 82142152 -21352822 - ORR1A3 LTR MaLR 0 326 1 3 1211 1677 194 90 47 chr15 82142152 82142239 -21352735 - Lx9 LINE L1 -3 7641 7555 3 1211 273 57 0 0 chr15 82142239 82142274 -21352700 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 1211 1677 194 90 47 chr15 82142274 82142630 -21352344 - Lx9 LINE L1 -90 7554 7179 3 1211 1472 282 19 12 chr15 82142632 82143011 -21351963 + Lx7 LINE L1 6511 6892 -804 3 1211 372 22 0 0 chr15 82143011 82143056 -21351918 + (GA)n Simple_repeat Simple_repeat 2 46 0 3 1211 1472 282 19 12 chr15 82143056 82143107 -21351867 + Lx7 LINE L1 6893 6943 -753 3 1211 1397 247 79 15 chr15 82143113 82143454 -21351520 - ORR1D1 LTR MaLR -11 363 1 3 1211 690 139 16 16 chr15 82143454 82143578 -21351396 + Lx7 LINE L1 6944 7067 -629 3 1211 319 208 175 19 chr15 82143616 82143719 -21351255 + Lx7 LINE L1 7140 7258 -438 3 1211 497 129 151 0 chr15 82143764 82143857 -21351117 - B3 SINE B2 -105 111 5 3 1211 412 279 101 0 chr15 82145145 82145274 -21349700 + B1F SINE Alu 1 142 -7 3 1211 586 280 17 64 chr15 82145284 82145517 -21349457 + ID_B1 SINE B4 1 222 -2 3 1211 817 272 94 4 chr15 82145787 82146053 -21348921 + B4A SINE B4 1 290 -2 3 1211 252 221 58 14 chr15 82146268 82146337 -21348637 - ID4_ SINE ID -11 72 1 3 1211 904 280 89 73 chr15 82146478 82146663 -21348311 + MTEa LTR MaLR 3 179 -200 3 1211 3205 33 48 0 chr15 82146663 82147055 -21347919 - IAPLTR2a LTR ERVK 0 411 1 3 1211 904 280 89 73 chr15 82147055 82147239 -21347735 + MTEa LTR MaLR 180 378 -1 3 1211 274 329 47 0 chr15 82147406 82147491 -21347483 + ID_B1 SINE B4 81 169 -55 3 1211 422 283 61 0 chr15 82147418 82147517 -21347457 + PB1D10 SINE Alu 12 116 -1 3 1211 189 175 0 0 chr15 82147653 82147693 -21347281 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1211 304 267 37 51 chr15 82147718 82147823 -21347151 - B3A SINE B2 -14 202 95 3 1211 230 242 209 45 chr15 82147835 82147969 -21347005 + MTE-int LTR MaLR 1256 1411 -169 3 1211 500 203 198 24 chr15 82147969 82148095 -21346879 - B1_Mus1 SINE Alu 0 148 1 3 1211 1351 86 5 5 chr15 82148107 82148294 -21346680 - B2_Mm1a SINE B2 -6 187 1 3 1211 284 206 0 73 chr15 82148323 82148372 -21346602 + B1_Mur4 SINE Alu 26 69 -81 3 1211 3590 181 122 71 chr15 82148372 82148991 -21345983 + RLTR25B LTR ERVK 1 624 -404 3 1211 1236 55 0 0 chr15 82148991 82149137 -21345837 + B1_Mus1 SINE Alu 2 147 -1 3 1211 3590 181 122 71 chr15 82149137 82149255 -21345719 + RLTR25B LTR ERVK 625 765 -263 3 1211 1313 89 28 0 chr15 82149255 82149434 -21345540 - B2_Mm1t SINE B2 -9 184 1 3 1211 3590 181 122 71 chr15 82149434 82149480 -21345494 + RLTR25B LTR ERVK 766 819 -209 3 1211 477 0 0 0 chr15 82149480 82149533 -21345441 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1211 3590 181 122 71 chr15 82149533 82149705 -21345269 + RLTR25B LTR ERVK 820 1006 -22 3 1211 387 248 112 77 chr15 82149682 82149720 -21345254 + B3 SINE B2 41 86 -130 3 1211 2583 71 12 9 chr15 82149720 82150046 -21344928 + ORR1A2 LTR MaLR 1 327 0 3 1211 387 248 112 77 chr15 82150046 82150177 -21344797 + B3 SINE B2 87 216 0 3 1211 599 218 50 21 chr15 82150186 82150340 -21344634 + B3 SINE B2 1 147 -48 3 1211 1626 173 97 7 chr15 82151012 82151321 -21343653 - ORR1B1 LTR MaLR -57 337 1 3 1211 1191 75 0 0 chr15 82151355 82151514 -21343460 - B2_Mm2 SINE B2 -35 160 2 3 1211 2977 58 55 22 chr15 82151619 82152023 -21342951 - Lx3_Mus LINE L1 0 7009 6593 3 1211 5078 51 8 1 chr15 82152023 82152688 -21342286 + Lx3_Mus LINE L1 5943 6611 -398 3 1211 336 247 58 12 chr15 82152851 82152937 -21342037 + PB1D7 SINE Alu 31 120 0 3 1211 185 273 35 94 chr15 82153211 82153296 -21341678 + L2c LINE L2 2804 2883 -536 3 1211 367 369 88 5 chr15 82153442 82153646 -21341328 + L2c LINE L2 3101 3321 -66 3 1211 234 174 0 0 chr15 82153719 82153765 -21341209 + (CACG)n Simple_repeat Simple_repeat 1 46 0 3 1211 302 219 217 19 chr15 82154145 82154256 -21340718 + B1_Mur3 SINE Alu 2 135 -14 3 1211 560 161 40 34 chr15 82154377 82154525 -21340449 - RMER1C Other Other -12 1330 1182 3 1211 849 221 27 0 chr15 82154668 82154865 -21340109 - RMER1B Other Other -177 889 708 3 1211 1040 177 25 25 chr15 82154918 82155121 -21339853 + B3 SINE B2 14 216 0 3 1211 220 253 24 96 chr15 82156259 82156342 -21338632 - L2a LINE L2 -282 3144 3068 3 1211 387 169 0 0 chr15 82156586 82156657 -21338317 + (TG)n Simple_repeat Simple_repeat 1 71 0 3 1211 331 353 90 8 chr15 82156681 82156815 -21338159 - MT2A LTR ERVL -104 429 285 3 1211 324 290 169 17 chr15 82157386 82157558 -21337416 + L1MCa LINE L1 402 599 -5909 3 1211 503 242 0 0 chr15 82157715 82157814 -21337160 + PB1D10 SINE Alu 11 109 -8 3 1211 484 207 68 8 chr15 82157868 82157985 -21336989 + RMER10B LTR ERVL 275 398 0 3 1211 782 215 60 39 chr15 82158093 82158325 -21336649 + B4A SINE B4 1 237 -55 3 1211 344 321 30 48 chr15 82158586 82158753 -21336221 + MTD LTR MaLR 12 175 -244 3 1211 643 292 138 25 chr15 82158670 82158996 -21335978 + MT2A LTR ERVL 63 425 -108 3 1211 245 346 93 9 chr15 82159000 82159108 -21335866 + MT2A LTR ERVL 349 465 -68 3 1211 360 0 0 0 chr15 82159109 82159149 -21335825 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1211 220 244 44 99 chr15 82159434 82159525 -21335449 + MIRm SINE MIR 17 102 -174 3 1211 243 133 0 22 chr15 82161765 82161811 -21333163 - B3 SINE B2 0 216 172 3 1211 501 264 46 104 chr15 82161824 82161997 -21332977 - RSINE1 SINE B4 0 165 3 3 1211 294 262 37 18 chr15 82163305 82163414 -21331560 + BC1_Mm scRNA scRNA 14 124 -28 3 1211 279 71 0 0 chr15 82163419 82163461 -21331513 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 3 1211 450 244 126 0 chr15 82163480 82163599 -21331375 + ID_B1 SINE B4 84 217 -7 3 1211 523 184 157 9 chr15 82163612 82163727 -21331247 + B1_Mur3 SINE Alu 16 147 -2 3 1211 190 176 0 38 chr15 82163742 82163795 -21331179 + GA-rich Low_complexity Low_complexity 4 54 0 3 1211 218 300 0 16 chr15 82164000 82164061 -21330913 - MIR SINE MIR -100 162 103 3 1211 1271 93 55 6 chr15 82164083 82164266 -21330708 + B2_Mm2 SINE B2 4 195 0 3 1211 813 95 0 0 chr15 82164276 82164392 -21330582 + (GGAGA)n Simple_repeat Simple_repeat 3 118 0 3 1211 432 0 0 0 chr15 82164443 82164491 -21330483 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1211 875 165 87 5 chr15 82164922 82165117 -21329857 + URR1A DNA MER1_type 16 226 0 3 1211 424 230 78 36 chr15 82165117 82165144 -21329830 - CYRA11_Mm Unknown Y-chromosome -444 173 140 3 1211 735 207 152 20 chr15 82166537 82166647 -21328327 + ID_B1 SINE B4 2 128 -96 3 1211 905 142 50 0 chr15 82166647 82166788 -21328186 - B1_Mur2 SINE Alu -1 148 1 3 1211 735 207 152 20 chr15 82166788 82166874 -21328100 + ID_B1 SINE B4 129 223 -1 3 1211 28 0 0 0 chr15 82167716 82167744 -21327230 + AT_rich Low_complexity Low_complexity 1 28 0 3 1211 808 146 20 20 chr15 82168775 82168922 -21326052 + B1F2 SINE Alu 3 149 0 3 1211 282 29 0 0 chr15 82169561 82169596 -21325378 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1211 533 71 143 0 chr15 82169603 82169687 -21325287 - B1_Mus2 SINE Alu 0 147 52 4 1211 564 206 206 0 chr15 82170163 82170338 -21324636 + B3 SINE B2 2 212 -4 4 1211 355 296 116 27 chr15 82170494 82170640 -21324334 + L2a LINE L2 3035 3193 -233 4 1211 851 110 0 0 chr15 82173084 82173202 -21321772 + 5S rRNA rRNA 3 120 -1 4 1211 240 35 0 0 chr15 82173203 82173232 -21321742 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 1211 431 282 47 47 chr15 82173266 82173437 -21321537 + ID_B1 SINE B4 54 224 0 4 1211 27 0 0 0 chr15 82173507 82173534 -21321440 + AT_rich Low_complexity Low_complexity 1 27 0 4 1211 240 240 162 48 chr15 82175460 82175565 -21319409 - PB1D10 SINE Alu 0 117 1 4 1211 347 202 65 33 chr15 82175667 82175759 -21319215 + ID_B1 SINE B4 123 217 -7 4 1211 351 224 146 39 chr15 82175994 82176006 -21318968 - ID_B1 SINE B4 -4 220 82 4 1211 554 144 124 18 chr15 82176006 82176119 -21318855 - B1_Mur2 SINE Alu -24 125 1 4 1211 297 0 0 0 chr15 82176157 82176190 -21318784 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 1211 497 173 290 0 chr15 82177067 82177229 -21317745 + B3 SINE B2 2 210 -6 4 1211 846 197 65 10 chr15 82177817 82178017 -21316957 - B3 SINE B2 -5 211 1 4 1211 566 233 31 0 chr15 82179117 82179246 -21315728 + ID_B1 SINE B4 84 216 -8 4 1211 728 180 10 23 chr15 82179628 82179804 -21315170 - B3A SINE B2 -16 177 6 4 1211 436 240 0 10 chr15 82180060 82180161 -21314813 + ID_B1 SINE B4 122 221 -3 4 1211 701 199 66 0 chr15 82181131 82181267 -21313707 + B1_Mur2 SINE Alu 5 149 0 4 1211 291 167 19 0 chr15 82181757 82181811 -21313163 - BC1_Mm scRNA scRNA -81 71 17 4 1212 335 254 32 2 chr15 82182212 82182315 -21312659 + B3A SINE B2 60 163 -53 4 1212 519 17 0 0 chr15 82182323 82182383 -21312591 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 1212 220 196 65 0 chr15 82182817 82182863 -21312111 + PB1D9 SINE Alu 1 49 -71 4 1212 225 119 0 63 chr15 82182868 82182886 -21312088 + A-rich Low_complexity Low_complexity 5 22 0 4 1212 1218 41 0 0 chr15 82182886 82183032 -21311942 + B1_Mm SINE Alu 2 147 0 4 1212 225 119 0 63 chr15 82183032 82183076 -21311898 + A-rich Low_complexity Low_complexity 23 63 0 4 1212 628 128 20 0 chr15 82183092 82183194 -21311780 + B1_Mur1 SINE Alu 46 149 0 4 1212 318 286 143 0 chr15 82183602 82183721 -21311253 - MIR SINE MIR -67 195 60 4 1212 300 206 82 61 chr15 82185163 82185261 -21309713 - B1_Mur1 SINE Alu -5 144 45 4 1212 664 245 50 30 chr15 82185304 82185502 -21309472 - B3 SINE B2 -14 202 1 4 1212 811 198 172 22 chr15 82185838 82186070 -21308904 - ORR1D1 LTR MaLR -107 267 1 4 1212 357 109 0 0 chr15 82186245 82186300 -21308674 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1212 21 0 0 0 chr15 82186301 82186322 -21308652 + AT_rich Low_complexity Low_complexity 1 21 0 4 1212 339 89 0 0 chr15 82187664 82187720 -21307254 + (TCTCTG)n Simple_repeat Simple_repeat 6 61 0 4 1212 570 179 88 64 chr15 82188479 82188604 -21306370 - B1_Mur1 SINE Alu -17 132 5 4 1212 204 40 0 0 chr15 82188696 82188721 -21306253 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1212 745 206 82 10 chr15 82188767 82188973 -21306001 - RMER10A LTR ERVL -6 436 216 4 1212 487 343 0 0 chr15 82190017 82190157 -21304817 + B1F1 SINE Alu 2 141 -8 4 1212 371 280 23 53 chr15 82190158 82190266 -21304708 + B1F2 SINE Alu 22 131 -18 4 1212 3082 82 27 40 chr15 82190266 82190747 -21304227 + MT2C_Mm LTR ERVL 1 475 0 4 1212 371 280 23 53 chr15 82190747 82190770 -21304204 + B1F2 SINE Alu 132 149 0 4 1212 589 170 19 9 chr15 82190804 82190911 -21304063 + PB1D9 SINE Alu 1 108 -12 4 1212 561 261 31 0 chr15 82191116 82191246 -21303728 + B1_Mur3 SINE Alu 1 134 -15 4 1212 195 69 0 0 chr15 82192018 82192047 -21302927 + (CACG)n Simple_repeat Simple_repeat 3 31 0 4 1212 586 257 21 0 chr15 82192316 82192456 -21302518 - MTE2b LTR MaLR -46 333 191 4 1212 618 241 166 6 chr15 82192704 82192879 -21302095 - MTE2b LTR MaLR -155 224 22 4 1212 3791 36 84 125 chr15 82192964 82193630 -21301344 + RLTR6_Mm LTR ERV1 1 639 -15 4 1212 6404 23 46 17 chr15 82193631 82194437 -21300537 + RLTR6-int LTR ERV1 1 829 -6949 4 1212 356 153 146 35 chr15 82194445 82194568 -21300406 + MMVL30-int LTR ERV1 280 377 -2922 4 1212 15151 35 26 6 chr15 82194861 82197786 -21297188 + MMVL30-int LTR ERV1 716 3698 0 4 1212 3645 36 87 128 chr15 82197786 82198432 -21296542 + RLTR6_Mm LTR ERV1 1 619 -35 4 1212 2167 109 113 26 chr15 82198510 82198935 -21296039 + RMER4A LTR ERVK 5 466 0 4 1212 189 171 0 0 chr15 82199114 82199149 -21295825 + G-rich Low_complexity Low_complexity 5 39 0 4 1212 973 202 28 24 chr15 82199149 82199362 -21295612 - RLTR42 LTR ERVK -25 214 1 4 1212 381 77 15 30 chr15 82199362 82199429 -21295545 - RLTR42-int LTR ERVK -1 5521 5456 4 1212 272 208 18 127 chr15 82199429 82199539 -21295435 - RLTR14 LTR ERV1 -283 99 2 4 1212 417 331 12 0 chr15 82200102 82200262 -21294712 - RLTR14-int LTR ERV1 -262 5055 4894 4 1212 449 262 8 8 chr15 82200612 82200739 -21294235 - RLTR14-int LTR ERV1 -4900 417 291 4 1212 2103 147 47 0 chr15 82200922 82201282 -21293692 - RLTR14 LTR ERV1 -3 379 3 4 1212 204 211 39 0 chr15 82205101 82205153 -21289821 - MIRc SINE MIR -111 157 104 4 1212 940 116 123 34 chr15 82205262 82205441 -21289533 - B2_Mm2 SINE B2 0 195 1 4 1212 560 271 0 15 chr15 82205543 82205674 -21289300 - B1_Mur1 SINE Alu -20 129 1 4 1212 225 154 0 0 chr15 82205695 82205734 -21289240 + CT-rich Low_complexity Low_complexity 2 40 0 4 1212 636 241 14 7 chr15 82205737 82205883 -21289091 - B1_Mur2 SINE Alu -1 148 2 4 1212 243 0 0 0 chr15 82206666 82206693 -21288281 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1212 504 0 0 0 chr15 82207825 82207881 -21287093 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 1212 207 69 0 0 chr15 82207949 82207978 -21286996 + (CAGA)n Simple_repeat Simple_repeat 3 31 0 4 1212 237 323 0 0 chr15 82209368 82209430 -21285544 + PB1D7 SINE Alu 49 110 -10 4 1212 434 65 0 16 chr15 82209700 82209763 -21285211 + (TTCC)n Simple_repeat Simple_repeat 4 65 0 4 1212 653 139 0 73 chr15 82209764 82209888 -21285086 - B1_Mur2 SINE Alu -8 141 27 4 1212 272 212 0 23 chr15 82210675 82210762 -21284212 + GA-rich Low_complexity Low_complexity 1 85 0 4 1212 663 13 0 0 chr15 82210866 82210942 -21284032 + (GGA)n Simple_repeat Simple_repeat 2 77 0 4 1212 323 351 39 19 chr15 82211180 82211475 -21283499 + L1M4c LINE L1 1609 1877 -4601 4 1212 327 377 39 13 chr15 82211503 82211737 -21283237 + L1M4c LINE L1 1931 2170 -4214 4 1212 239 270 98 57 chr15 82211742 82211864 -21283110 + B4 SINE B4 144 270 -22 4 1212 236 91 23 0 chr15 82211952 82211996 -21282978 + (TAAAA)n Simple_repeat Simple_repeat 4 48 0 4 1212 504 244 93 23 chr15 82212120 82212292 -21282682 - MTD LTR MaLR -18 401 218 4 1212 7479 232 88 61 chr15 82212773 82214197 -21280777 - MurERV4-int LTR ERVK -1555 3705 2299 4 1212 618 51 0 0 chr15 82214197 82214275 -21280699 + (GA)n Simple_repeat Simple_repeat 1 78 0 4 1212 7479 247 82 63 chr15 82214275 82215968 -21279006 - MurERV4-int LTR ERVK -2962 2298 532 4 1212 213 39 0 0 chr15 82216218 82216244 -21278730 + (GA)n Simple_repeat Simple_repeat 1 26 0 4 1212 303 130 0 0 chr15 82216355 82216401 -21278573 - MurERV4-int LTR ERVK -2562 2698 2653 4 1212 242 219 77 64 chr15 82216470 82216548 -21278426 + ID4_ SINE ID 3 81 -2 4 1212 548 91 11 0 chr15 82216928 82217016 -21277958 + (CA)n Simple_repeat Simple_repeat 2 90 0 4 1212 211 204 0 0 chr15 82217124 82217142 -21277832 + A-rich Low_complexity Low_complexity 1 18 0 4 1212 1196 58 116 0 chr15 82217142 82217315 -21277659 + B2_Mm2 SINE B2 2 194 -1 4 1212 211 204 0 0 chr15 82217315 82217340 -21277634 + A-rich Low_complexity Low_complexity 19 43 0 4 1212 352 283 121 16 chr15 82217445 82217635 -21277339 - B3 SINE B2 -6 210 1 4 1212 470 221 65 39 chr15 82217649 82217804 -21277170 - MER44A DNA MER2_type -100 239 81 4 1212 1026 80 15 0 chr15 82217881 82218018 -21276956 + B1_Mus1 SINE Alu 1 139 -9 4 1212 444 19 0 0 chr15 82218018 82218071 -21276903 + (CAAAC)n Simple_repeat Simple_repeat 2 54 0 4 1212 291 277 160 12 chr15 82218122 82218329 -21276645 + L1MB2 LINE L1 5882 6120 -60 4 1212 250 335 148 27 chr15 82218516 82218853 -21276121 + MER77 LTR ERVL 8 385 -222 4 1212 337 325 23 61 chr15 82219242 82219373 -21275601 - B1F SINE Alu -1 148 23 4 1212 217 0 61 0 chr15 82220306 82220339 -21274635 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 4 1212 1078 103 0 0 chr15 82220978 82221124 -21273850 + B1_Mus2 SINE Alu 1 146 -1 4 1212 290 329 39 7 chr15 82221568 82221721 -21273253 - RSINE1 SINE B4 -6 159 2 4 1212 2173 131 66 11 chr15 82223055 82223434 -21271540 - MTB LTR MaLR 0 400 1 4 1212 305 366 0 0 chr15 82223465 82223588 -21271386 + (TG)n Simple_repeat Simple_repeat 2 124 0 4 1212 356 305 86 40 chr15 82226448 82226622 -21268352 + MER77 LTR ERVL 337 518 -89 4 1212 3397 38 5 0 chr15 82227170 82227564 -21267410 + MTA_Mm LTR MaLR 1 396 0 4 1212 3443 38 0 0 chr15 82227767 82228163 -21266811 + MTA_Mm LTR MaLR 1 396 0 4 1212 1213 105 0 37 chr15 82228823 82229011 -21265963 + B2_Mm2 SINE B2 3 183 -12 4 1212 464 222 10 0 chr15 82229117 82229216 -21265758 + B1_Mus2 SINE Alu 42 141 -6 4 1212 244 209 111 44 chr15 82229243 82229378 -21265596 + L1M3 LINE L1 2802 2945 -3195 4 1212 219 274 0 0 chr15 82229449 82229500 -21265474 + ID4_ SINE ID 31 81 -2 4 1212 1143 237 188 3 chr15 82229559 82229889 -21265085 - MTD LTR MaLR -11 408 18 4 1212 189 0 0 0 chr15 82230021 82230042 -21264932 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1212 780 207 14 0 chr15 82230042 82230187 -21264787 + B1_Mus1 SINE Alu 2 148 0 4 1212 427 329 100 8 chr15 82230795 82231055 -21263919 + B4A SINE B4 3 286 -6 4 1212 461 218 6 0 chr15 82231069 82231234 -21263740 + (CA)n Simple_repeat Simple_repeat 1 166 0 5 1212 388 302 11 34 chr15 82231237 82231496 -21263478 + (CATA)n Simple_repeat Simple_repeat 1 253 0 5 1212 3629 144 36 11 chr15 82231500 82232132 -21262842 + RMER17A2 LTR ERVK 1 648 -258 5 1212 241 294 122 24 chr15 82232647 82232811 -21262163 + MER77 LTR ERVL 422 601 -6 5 1212 371 323 92 5 chr15 82233003 82233146 -21261828 - B1F SINE Alu -1 148 2 5 1212 284 338 46 7 chr15 82235100 82235252 -21259722 - RSINE1 SINE B4 -6 159 2 5 1212 351 352 0 0 chr15 82236614 82236753 -21258221 + (TG)n Simple_repeat Simple_repeat 2 140 0 5 1212 35 0 0 0 chr15 82238985 82239020 -21255954 + AT_rich Low_complexity Low_complexity 1 35 0 5 1212 10035 42 41 38 chr15 82239020 82240674 -21254300 - L1Md_F3 LINE L1 -2 6582 4843 5 1212 236 250 78 29 chr15 82240674 82240777 -21254197 + MER72B LTR ERV1 280 387 -381 5 1212 10035 42 41 38 chr15 82240777 82241208 -21253766 - L1Md_F3 LINE L1 -2 4842 4388 5 1212 410 202 0 53 chr15 82241207 82241301 -21253673 - L1VL1 LINE L1 -6204 218 130 5 1212 365 372 19 50 chr15 82241836 82241997 -21252977 + RSINE1 SINE B4 4 159 -6 5 1212 5347 116 26 43 chr15 82242056 82243372 -21251602 + L1VL4 LINE L1 674 1957 -1860 5 1212 592 192 8 60 chr15 82243612 82243745 -21251229 - RLTR20B2 LTR ERVK -434 126 1 5 1212 2048 242 78 5 chr15 82243745 82244732 -21250242 + Lx3C LINE L1 5877 6976 0 5 1212 3212 36 31 0 chr15 82244779 82245163 -21249811 + MTA_Mm LTR MaLR 1 396 0 5 1212 249 217 51 26 chr15 82245252 82245408 -21249566 + (TTATA)n Simple_repeat Simple_repeat 2 161 0 5 1212 400 252 200 6 chr15 82245485 82245714 -21249260 + L2a LINE L2 2875 3143 -283 5 1212 259 312 27 0 chr15 82245916 82246028 -21248946 + L1M3 LINE L1 5322 5436 -747 5 1212 291 51 0 0 chr15 82246056 82246074 -21248900 + (A)n Simple_repeat Simple_repeat 1 18 0 5 1212 1253 41 0 0 chr15 82246074 82246221 -21248753 + B1_Mus2 SINE Alu 1 147 0 5 1212 291 51 0 0 chr15 82246221 82246241 -21248733 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1212 367 44 0 0 chr15 82246620 82246665 -21248309 - ORR1A3 LTR MaLR 0 326 282 5 1212 1644 114 0 12 chr15 82246665 82246905 -21248069 - L1Md_F2 LINE L1 -40 6542 6306 5 1212 1931 150 8 10 chr15 82246905 82247262 -21247712 - ORR1A2 LTR MaLR -41 353 1 5 1212 725 22 0 11 chr15 82248319 82248411 -21246563 - L1_Mm LINE L1 -1829 4054 3964 5 1212 4272 73 33 5 chr15 82248411 82248986 -21245988 + L1Md_F2 LINE L1 5992 6582 0 5 1212 589 244 18 55 chr15 82249318 82249483 -21245491 + RLTR9A LTR ERVK 210 368 0 5 1212 775 294 35 8 chr15 82249491 82249752 -21245222 + RodERV21-int LTR ERV1 730 997 -3994 5 1212 1263 156 188 28 chr15 82249995 82250460 -21244514 + RMER17C-int LTR ERVK 1477 2016 -1222 5 1212 2182 191 34 24 chr15 82250493 82250906 -21244068 - RLTR17 LTR ERVK 0 692 276 5 1212 785 238 39 26 chr15 82250920 82250959 -21244015 + RMER17C LTR ERVK 77 114 -296 5 1212 1296 84 0 0 chr15 82250959 82251138 -21243836 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 5 1212 785 238 39 26 chr15 82251138 82251409 -21243565 + RMER17C LTR ERVK 115 390 -20 5 1212 354 240 52 10 chr15 82252911 82253008 -21241966 - RSINE1 SINE B4 -63 102 2 5 1212 438 36 0 0 chr15 82253038 82253094 -21241880 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1212 2144 132 0 19 chr15 82254831 82254923 -21240051 - ORR1A2 LTR MaLR -8 319 233 5 1212 3229 46 18 0 chr15 82254923 82255316 -21239658 - MTB LTR MaLR 0 400 1 5 1212 2144 132 0 19 chr15 82255316 82255548 -21239426 - ORR1A2 LTR MaLR -95 232 1 5 1212 3309 153 28 91 chr15 82255549 82256230 -21238744 - ORR1A2-int LTR MaLR -1 1962 1325 5 1212 1894 139 63 0 chr15 82256247 82256564 -21238410 - Lx3_Mus LINE L1 -2 7007 6671 5 1212 2245 50 11 0 chr15 82256564 82256844 -21238130 + LTRIS_Mus LTR ERV1 10 292 -295 5 1212 710 64 0 0 chr15 82256842 82256936 -21238038 + LTRIS_Mus LTR ERV1 494 587 0 5 1212 3373 168 14 14 chr15 82256936 82257583 -21237391 - ORR1A2-int LTR MaLR -648 1315 329 5 1212 606 229 18 95 chr15 82257542 82257711 -21237263 - MT2B LTR ERVL -314 287 132 5 1212 275 205 63 13 chr15 82257643 82257721 -21237253 - ORR1A2-int LTR MaLR -1187 605 524 5 1212 1216 231 39 84 chr15 82257721 82258152 -21236822 + RMER16 LTR ERVK 1 533 0 5 1212 7368 190 53 32 chr15 82258152 82258813 -21236161 + RMER16-int LTR ERVK 1 698 -4708 5 1212 243 0 0 0 chr15 82258813 82258840 -21236134 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 5 1212 10631 158 47 16 chr15 82258840 82261534 -21233440 + RMER16-int LTR ERVK 699 3455 -1951 5 1212 4723 109 81 1 chr15 82261536 82262129 -21232845 + L1VL2 LINE L1 250 883 -5452 5 1212 202 29 0 54 chr15 82262129 82262166 -21232808 + (CAAAC)n Simple_repeat Simple_repeat 1 35 0 5 1212 4723 117 25 37 chr15 82262166 82262678 -21232296 + L1VL2 LINE L1 884 1390 -2225 5 1212 2180 176 15 20 chr15 82262678 82263085 -21231889 + ORR1A3-int LTR MaLR 848 1252 -711 5 1212 4684 65 5 22 chr15 82263085 82263682 -21231292 - LTRIS_Mus LTR ERV1 0 587 1 5 1212 332 22 0 22 chr15 82263758 82263804 -21231170 + (CAAA)n Simple_repeat Simple_repeat 1 45 0 5 1212 6254 132 62 39 chr15 82264345 82265433 -21229541 - RLTR13D3 LTR ERVK 0 1114 1 5 1212 492 72 0 0 chr15 82265828 82265897 -21229077 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 1212 374 299 40 92 chr15 82265912 82266085 -21228889 + RSINE1 SINE B4 2 165 0 5 1212 496 319 66 19 chr15 82267424 82267680 -21227294 - RodERV21-int LTR ERV1 -3994 997 730 5 1212 513 242 228 45 chr15 82267688 82267999 -21226975 - RLTR9A LTR ERVK 0 368 1 5 1212 2421 175 2 5 chr15 82269572 82269986 -21224988 + ORR1A2-int LTR MaLR 1551 1963 0 5 1212 2033 154 9 0 chr15 82269986 82270310 -21224664 + ORR1A2 LTR MaLR 1 327 0 5 1212 316 271 166 48 chr15 82270463 82270819 -21224155 - L1M3 LINE L1 -452 5719 5322 5 1212 301 384 38 50 chr15 82270973 82271132 -21223842 - RSINE1 SINE B4 -5 160 4 5 1212 298 283 124 18 chr15 82271655 82271824 -21223150 - MER77 LTR ERVL -36 571 385 5 1212 376 348 0 0 chr15 82274689 82274830 -21220144 + (CA)n Simple_repeat Simple_repeat 2 142 0 5 1212 367 291 147 33 chr15 82275156 82275462 -21219512 - MER77 LTR ERVL -222 385 45 5 1212 5419 116 53 17 chr15 82275686 82276216 -21218758 - RMER17A2 LTR ERVK 0 906 370 5 1212 465 19 0 0 chr15 82276216 82276270 -21218704 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 1212 5419 116 53 17 chr15 82276270 82276614 -21218360 - RMER17A2 LTR ERVK -537 369 1 5 1212 310 289 11 0 chr15 82276737 82277024 -21217950 + (TG)n Simple_repeat Simple_repeat 1 290 0 5 1212 480 309 83 0 chr15 82277049 82277301 -21217673 - B4A SINE B4 -17 275 3 5 1212 856 194 0 0 chr15 82277913 82278057 -21216917 - B1_Mus1 SINE Alu -1 147 4 5 1212 1015 234 188 3 chr15 82278200 82278530 -21216444 + MTD LTR MaLR 18 408 -11 5 1212 399 242 10 0 chr15 82278874 82278973 -21216001 - B1_Mus2 SINE Alu -6 141 42 5 1212 1157 116 0 37 chr15 82279080 82279268 -21215706 - B2_Mm2 SINE B2 -12 183 3 5 1212 293 308 86 25 chr15 82280664 82280827 -21214147 - MER77 LTR ERVL -99 508 336 5 1212 232 246 16 0 chr15 82283598 82283659 -21211315 + ID4 SINE ID 3 64 -19 5 1212 576 97 0 0 chr15 82283703 82283796 -21211178 + (GA)n Simple_repeat Simple_repeat 2 94 0 5 1212 209 329 0 12 chr15 82283837 82283923 -21211051 + (CATA)n Simple_repeat Simple_repeat 4 88 0 5 1212 323 286 38 38 chr15 82285283 82285414 -21209560 + RSINE1 SINE B4 2 132 -33 5 1212 245 320 60 30 chr15 82287397 82287514 -21207460 + B1F SINE Alu 13 132 -17 5 1212 13807 63 14 8 chr15 82288974 82289720 -21205254 - L1_Mus2 LINE L1 -1 6565 5812 5 1212 1575 132 33 66 chr15 82289720 82290053 -21204921 - RLTRETN_Mm LTR ERVK 0 322 1 5 1212 13807 96 6 16 chr15 82290053 82291997 -21202977 - L1_Mus2 LINE L1 -71 5812 3882 5 1212 218 326 52 7 chr15 82293585 82293721 -21201253 + RSINE1 SINE B4 2 143 -22 5 1212 519 268 119 21 chr15 82296765 82296959 -21198015 - B3 SINE B2 0 216 4 5 1212 430 178 294 0 chr15 82298910 82299036 -21195938 + ORR1A2 LTR MaLR 6 168 -159 5 1212 6638 146 30 3 chr15 82299036 82300217 -21194757 - L1_Mur1 LINE L1 -724 5162 3951 5 1212 3404 168 58 6 chr15 82300217 82300599 -21194375 + L1_Mur1 LINE L1 5172 5577 -309 5 1212 360 0 0 0 chr15 82300599 82300639 -21194335 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 1212 3404 168 58 6 chr15 82300639 82300897 -21194077 + L1_Mur1 LINE L1 5578 5845 -41 5 1212 33410 80 7 3 chr15 82300897 82306589 -21188385 + L1Md_F2 LINE L1 98 5586 -297 5 1212 8444 37 0 0 chr15 82306589 82307573 -21187401 + L1Md_F2 LINE L1 5587 6570 -12 5 1212 5438 171 32 11 chr15 82307584 82308613 -21186361 + Lx3B LINE L1 5827 6877 -96 5 1212 2771 61 3 3 chr15 82308618 82308962 -21186012 + ORR1A1 LTR MaLR 3 346 0 5 1212 2222 83 28 8 chr15 82308962 82309315 -21185659 + ORR1A1-int LTR MaLR 1 360 -1432 5 1212 11527 75 11 4 chr15 82309301 82311399 -21183575 + ORR1A1-int LTR MaLR 94 1792 0 5 1212 2374 54 105 6 chr15 82311399 82311714 -21183260 + ORR1A1 LTR MaLR 1 346 0 5 1212 329 278 21 0 chr15 82311748 82311845 -21183129 + Lx3B LINE L1 6874 6972 -1 5 1212 12827 155 40 15 chr15 82311871 82313132 -21181842 + L1VL2 LINE L1 15 1308 -2307 5 151 2963 37 0 8 chr15 82313132 82313489 -21181485 - L1Md_F3 LINE L1 -15 6569 6216 5 1213 12827 121 19 10 chr15 82313489 82315173 -21179801 + L1VL2 LINE L1 1309 3011 -604 5 1213 399 138 0 30 chr15 82315191 82315258 -21179716 + RMER16-int LTR ERVK 3441 3505 -1901 5 1213 6423 146 41 9 chr15 82315270 82316769 -21178205 + RMER16-int LTR ERVK 3567 5113 -293 5 1213 374 202 12 0 chr15 82316771 82316855 -21178119 + RMER16 LTR ERVK 449 533 0 5 1213 2302 184 26 53 chr15 82316855 82317386 -21177588 - ORR1A3-int LTR MaLR -1441 522 6 5 1213 755 162 62 49 chr15 82317386 82317477 -21177497 - ORR1A3 LTR MaLR -8 318 225 5 1213 7446 64 12 23 chr15 82317477 82318466 -21176508 + RLTR13A3 LTR ERVK 1 978 0 5 1213 755 162 62 49 chr15 82318466 82318536 -21176438 - ORR1A3 LTR MaLR -102 224 155 5 1213 414 0 0 0 chr15 82318536 82318582 -21176392 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 1213 37940 79 16 12 chr15 82318627 82324941 -21170033 - L1Md_F3 LINE L1 -14 6573 236 5 1213 4439 145 49 27 chr15 82324947 82325757 -21169217 - Lx LINE L1 0 6654 5827 5 1213 8983 122 10 3 chr15 82325775 82328061 -21166913 - L1_Mus3 LINE L1 -5 6633 4329 5 1213 14255 92 11 8 chr15 82328056 82330877 -21164097 - L1Md_A LINE L1 -2824 3059 231 5 1213 3465 218 73 14 chr15 82330879 82331731 -21163243 - RMER16-int LTR ERVK -3429 1977 1076 5 1213 418 205 78 64 chr15 82331731 82331872 -21163102 - RMER16 LTR ERVK -149 384 242 5 1213 284 227 29 43 chr15 82331872 82331941 -21163033 - ETnERV2-int LTR ERVK -4866 2540 2473 5 1213 338 109 0 18 chr15 82332014 82332070 -21162904 + ORR1A2-int LTR MaLR 523 577 -1215 5 1213 499 229 0 115 chr15 82332052 82332200 -21162774 + MT2B LTR ERVL 157 287 -314 5 1213 4796 172 30 69 chr15 82332158 82332742 -21162232 + ORR1A2-int LTR MaLR 718 1335 -628 5 1213 2370 122 3 3 chr15 82332742 82333094 -21161880 + Lx3_Mus LINE L1 6656 7007 -2 5 1213 4796 171 19 84 chr15 82333094 82333787 -21161187 + ORR1A2-int LTR MaLR 1166 1791 -1 5 1213 2205 116 25 0 chr15 82333788 82334107 -21160867 + ORR1A2 LTR MaLR 1 327 0 5 1213 2763 100 49 3 chr15 82335323 82335714 -21159260 + RLTR9E LTR ERVK 1 409 0 5 1213 573 76 0 0 chr15 82336246 82336325 -21158649 + (CA)n Simple_repeat Simple_repeat 2 80 0 5 1213 286 237 63 21 chr15 82336364 82336477 -21158497 + RSINE1 SINE B4 2 119 -173 5 1213 2894 148 30 42 chr15 82336653 82337293 -21157681 + RMER17A LTR ERVK 120 751 0 5 1213 1294 108 50 36 chr15 82337293 82337514 -21157460 + RMER17A-int LTR ERVK 1 224 -1504 5 1213 7226 104 14 43 chr15 82337592 82338834 -21156140 + RMER17A-int LTR ERVK 185 1728 0 5 1213 2983 132 61 18 chr15 82338847 82339451 -21155523 + RMER17A LTR ERVK 120 749 -2 5 1213 1343 174 25 111 chr15 82340764 82341240 -21153734 - RMER17C LTR ERVK -520 438 16 6 1213 795 212 0 17 chr15 82341245 82341418 -21153556 - RMER17C-int LTR ERVK 0 3238 3069 6 1213 1209 187 13 19 chr15 82342069 82342351 -21152623 + ORR1A2 LTR MaLR 1 272 -122 6 1213 316 235 104 60 chr15 82342351 82342513 -21152461 - RLTR13D3 LTR ERVK 0 1114 983 6 1213 1087 323 40 29 chr15 82343309 82344099 -21150875 - ETnERV3-int LTR ERVK -30 5778 4980 6 1213 1867 317 35 33 chr15 82345264 82346431 -21148543 - MMTV-int LTR ERVK -1971 5282 4113 6 1213 674 304 55 40 chr15 82349716 82350285 -21144689 - MMTV-int LTR ERVK -3382 3871 3295 6 1213 1091 126 6 6 chr15 82350761 82350936 -21144038 + RLTR13D5 LTR ERVK 1 175 -848 6 1213 15854 93 6 3 chr15 82350946 82353922 -21141052 - L1_Mus1 LINE L1 0 6567 3583 6 1213 2235 90 132 11 chr15 82353922 82354270 -21140704 - RLTR10 LTR ERVK 0 390 1 6 1213 8666 252 43 38 chr15 82354270 82359526 -21135448 - RLTR10-int LTR ERVK -1299 5243 707 6 1213 6141 22 4 0 chr15 82359551 82360239 -21134735 - RLTR10-int LTR ERVK -995 992 302 6 1213 2277 73 138 17 chr15 82360239 82360587 -21134387 - RLTR10 LTR ERVK 0 390 1 6 1213 16159 114 29 2 chr15 82360587 82363809 -21131165 - L1Md_F LINE L1 -2295 3588 279 6 1213 5885 70 25 12 chr15 82363810 82364675 -21130299 + RLTR13D5 LTR ERVK 147 1023 0 6 1213 2460 312 60 54 chr15 82364677 82366743 -21128231 - MMTV-int LTR ERVK -4019 3234 1155 6 1213 834 18 0 18 chr15 82366748 82366860 -21128114 - RLTRETN_Mm LTR ERVK 0 322 213 6 1213 7618 78 11 5 chr15 82366860 82368422 -21126552 + L1_Mus1 LINE L1 4992 6567 0 6 1213 1066 126 6 17 chr15 82368437 82368614 -21126360 - RLTR13D5 LTR ERVK -848 175 1 6 1213 2387 320 45 41 chr15 82369095 82371074 -21123900 + MMTV-int LTR ERVK 3295 5282 -1971 6 1213 1087 323 40 29 chr15 82372240 82373030 -21121944 + ETnERV3-int LTR ERVK 4980 5778 -30 6 1213 227 132 0 0 chr15 82373533 82373571 -21121403 + B2_Mm2 SINE B2 1 38 -157 6 1213 316 235 104 60 chr15 82373827 82373989 -21120985 + RLTR13D3 LTR ERVK 983 1114 0 6 1213 1157 183 12 17 chr15 82373989 82374271 -21120703 - ORR1A2 LTR MaLR -122 272 1 6 1213 795 212 0 17 chr15 82374923 82375096 -21119878 + RMER17C-int LTR ERVK 3069 3238 0 6 1213 1361 172 25 114 chr15 82375101 82375579 -21119395 + RMER17C LTR ERVK 16 439 -519 6 1213 2927 141 60 17 chr15 82376887 82377491 -21117483 - RMER17A LTR ERVK -2 749 120 6 1213 252 271 54 12 chr15 82377667 82377780 -21117194 - RSINE1 SINE B4 -173 119 2 6 1213 480 105 0 0 chr15 82377811 82377887 -21117087 + (TG)n Simple_repeat Simple_repeat 2 77 0 6 1213 2831 97 38 5 chr15 82378419 82378815 -21116159 - RLTR9E LTR ERVK 0 409 1 6 1213 2189 119 25 0 chr15 82380031 82380350 -21114624 - ORR1A2 LTR MaLR 0 327 1 6 1213 4965 173 8 77 chr15 82380351 82381049 -21113925 - ORR1A2-int LTR MaLR -1 1791 1166 6 1213 2398 117 3 6 chr15 82381049 82381402 -21113572 - Lx3_Mus LINE L1 -2 7007 6656 6 1213 4965 172 48 28 chr15 82381402 82381986 -21112988 - ORR1A2-int LTR MaLR -628 1335 718 6 1213 499 229 0 115 chr15 82381944 82382092 -21112882 - MT2B LTR ERVL -314 287 157 6 1213 338 109 0 18 chr15 82382074 82382130 -21112844 - ORR1A2-int LTR MaLR -1215 577 523 6 1213 296 250 0 14 chr15 82382204 82382273 -21112701 + ETnERV2-int LTR ERVK 2473 2540 -4866 6 1213 424 216 63 63 chr15 82382273 82382416 -21112558 + RMER16 LTR ERVK 242 384 -149 6 1213 3441 217 74 14 chr15 82382416 82383267 -21111707 + RMER16-int LTR ERVK 1076 1977 -3429 6 1213 2257 199 15 8 chr15 82383270 82383747 -21111227 + L1Md_A LINE L1 440 919 -5805 6 1213 5224 143 62 12 chr15 82384290 82384490 -21110484 + RMER17B LTR ERVK 1 202 -756 6 1213 477 0 0 0 chr15 82384490 82384543 -21110431 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1213 5224 143 62 12 chr15 82384543 82385254 -21109720 + RMER17B LTR ERVK 203 958 0 6 1213 229 267 17 0 chr15 82386302 82386362 -21108612 + ID4 SINE ID 4 64 -19 6 1213 374 350 0 0 chr15 82386369 82386526 -21108448 + (CA)n Simple_repeat Simple_repeat 2 158 0 6 1213 287 278 44 67 chr15 82387861 82387996 -21106978 + RSINE1 SINE B4 1 132 -33 6 1213 233 360 36 0 chr15 82389983 82390094 -21104880 + B1F1 SINE Alu 13 127 -22 6 1213 221 218 36 0 chr15 82390142 82390197 -21104777 + GA-rich Low_complexity Low_complexity 2 58 0 6 1213 319 294 165 11 chr15 82390369 82390744 -21104230 - MER77 LTR ERVL -6 601 169 6 1213 268 313 95 61 chr15 82390749 82390980 -21103994 - MER77 LTR ERVL -153 454 216 6 1213 261 0 0 0 chr15 82392496 82392525 -21102449 + (A)n Simple_repeat Simple_repeat 1 29 0 6 1213 215 318 73 29 chr15 82393163 82393299 -21101675 + RSINE1 SINE B4 2 143 -22 6 1213 7440 13 5 0 chr15 82394489 82395307 -21099667 + RLTR13B2 LTR ERVK 1 822 0 6 1213 247 271 0 0 chr15 82396179 82396238 -21098736 + PB1D10 SINE Alu 33 91 -26 6 1213 483 294 116 16 chr15 82397203 82397393 -21097581 - B3 SINE B2 -2 214 6 6 1213 284 270 0 0 chr15 82398590 82398653 -21096321 + ID4 SINE ID 2 64 -19 6 1213 435 161 0 0 chr15 82399399 82399486 -21095488 + ORR1A2 LTR MaLR 6 92 -235 6 1213 450 175 10 30 chr15 82399530 82399622 -21095352 - L1_Mur1 LINE L1 -734 5152 5061 6 1213 1851 146 115 14 chr15 82399622 82399970 -21095004 - RLTR9A2 LTR ERVK 0 383 1 6 1213 290 198 56 34 chr15 82400258 82400347 -21094627 - ETnERV2-int LTR ERVK -984 6422 6332 6 1213 279 245 14 55 chr15 82400437 82400541 -21094433 - MMETn-int LTR ERVK -1298 3546 3460 6 1213 15076 175 84 76 chr15 82400621 82401883 -21093091 - RMER16-int LTR ERVK -1230 4176 2871 6 1213 600 101 0 0 chr15 82401883 82401972 -21093002 + (TATG)n Simple_repeat Simple_repeat 2 90 0 6 1213 15076 175 84 76 chr15 82401972 82403034 -21091940 - RMER16-int LTR ERVK -2536 2870 1830 6 1213 189 0 0 0 chr15 82403034 82403055 -21091919 + (TTA)n Simple_repeat Simple_repeat 2 22 0 6 1213 15076 175 84 76 chr15 82403055 82403718 -21091256 - RMER16-int LTR ERVK -3577 1829 1260 6 1213 1611 26 5 15 chr15 82403718 82403913 -21091061 - B2_Mm1t SINE B2 0 193 1 6 1213 15076 175 84 76 chr15 82403913 82404758 -21090216 - RMER16-int LTR ERVK -4147 1259 316 6 1213 433 0 17 17 chr15 82404826 82404884 -21090090 + (TTTTA)n Simple_repeat Simple_repeat 4 61 0 6 1213 1850 154 77 0 chr15 82405115 82405466 -21089508 - RLTR9A2 LTR ERVK 0 383 6 6 1213 6119 146 10 36 chr15 82405474 82406621 -21088353 - Lx3B LINE L1 -819 5067 3951 6 1213 7604 156 20 6 chr15 82406621 82407535 -21087439 + Lx3B LINE L1 5172 6101 -872 6 1213 7470 17 1 0 chr15 82407535 82408356 -21086618 - RLTR13B2 LTR ERVK 0 822 1 6 1213 7604 163 23 15 chr15 82408356 82409135 -21085839 + Lx3B LINE L1 6102 6875 -98 6 1213 2272 127 67 15 chr15 82409135 82409536 -21085438 + BGLII_Mus LTR ERVK 1 422 0 6 1213 7604 163 23 15 chr15 82409536 82409632 -21085342 + Lx3B LINE L1 6876 6971 -2 6 1213 13843 120 20 6 chr15 82409662 82412585 -21082389 + L1VL2 LINE L1 18 2989 -626 6 1213 9226 156 26 18 chr15 82412614 82413148 -21081826 + RMER16-int LTR ERVK 3455 4000 -1406 6 1213 2791 79 164 7 chr15 82413148 82413582 -21081392 + RLTR44C LTR ERVK 1 502 0 6 1213 9226 156 26 18 chr15 82413582 82414693 -21080281 + RMER16-int LTR ERVK 4001 5112 -294 6 1213 427 155 12 0 chr15 82414695 82414779 -21080195 + RMER16 LTR ERVK 449 533 0 6 1213 2553 192 4 19 chr15 82414779 82415309 -21079665 - ORR1A1-int LTR MaLR -1441 522 1 6 1213 994 169 17 0 chr15 82415309 82415486 -21079488 - ORR1A1 LTR MaLR 0 346 167 6 1213 6753 159 17 8 chr15 82415512 82416684 -21078290 - Lx3B LINE L1 0 6973 5792 6 1213 5227 112 27 5 chr15 82416684 82417527 -21077447 + RLTR22_Mus LTR ERVK 5 866 -942 6 1213 15564 147 25 12 chr15 82417532 82420659 -21074315 - Lx LINE L1 0 6654 3474 6 1213 1572 37 11 11 chr15 82420659 82420850 -21074124 - B2_Mm1a SINE B2 -2 191 1 6 1213 15564 157 19 13 chr15 82420850 82421226 -21073748 - Lx LINE L1 -2410 3473 3107 6 1213 3030 18 0 0 chr15 82421226 82421563 -21073411 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 1213 57393 22 6 6 chr15 82421563 82428030 -21066944 - IAPEz-int LTR ERVK 0 6481 18 6 1213 9359 108 18 22 chr15 82428040 82428055 -21066919 - MusHAL1 LINE L1 -795 1917 1909 6 1213 3030 18 0 0 chr15 82428055 82428392 -21066582 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 1213 9359 108 18 22 chr15 82428392 82429896 -21065078 - MusHAL1 LINE L1 -804 1908 405 6 1213 3972 159 21 1 chr15 82429892 82430722 -21064252 - Lx3B LINE L1 -958 6015 5172 6 1213 7138 142 6 2 chr15 82430722 82431912 -21063062 + Lx3B LINE L1 3951 5144 -742 6 1213 451 180 162 3 chr15 82431912 82432056 -21062918 - ORR1A1 LTR MaLR -139 207 6 6 1213 243 290 0 0 chr15 82432801 82432863 -21062111 - ID4 SINE ID -19 64 3 6 1213 501 268 119 21 chr15 82434054 82434248 -21060726 + B3 SINE B2 4 216 0 6 1213 2970 71 118 0 chr15 82435538 82435963 -21059011 - IAPLTR2_Mm LTR ERVK 0 475 1 6 1213 14886 51 9 3 chr15 82435965 82437756 -21057218 - IAPEz-int LTR ERVK -2 6479 4678 6 1213 1920 89 0 0 chr15 82437774 82438020 -21056954 - IAPEz-int LTR ERVK -5183 2497 2252 6 1213 962 59 0 0 chr15 82438021 82438140 -21056834 - IAPEz-int LTR ERVK -5004 1477 1359 6 1213 3694 54 1 19 chr15 82438140 82438720 -21056254 - IAPEz-int LTR ERVK -5819 662 168 6 1213 226 327 0 0 chr15 82438720 82438775 -21056199 - RLTR27 LTR ERVK -34 275 221 6 1213 1207 71 10 107 chr15 82438775 82438980 -21055994 - IAPEz-int LTR ERVK -6288 193 9 6 1213 2994 66 118 0 chr15 82438981 82439406 -21055568 - IAPLTR2_Mm LTR ERVK 0 475 1 6 1213 212 298 57 8 chr15 82441185 82441307 -21053667 - RSINE1 SINE B4 -36 129 2 6 1213 297 0 0 0 chr15 82442624 82442657 -21052317 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 1213 232 270 14 0 chr15 82442728 82442802 -21052172 - ID4 SINE ID -6 77 3 6 1214 253 172 35 0 chr15 82445428 82445486 -21049488 + MER77 LTR ERVL 395 454 -153 6 1214 343 289 160 8 chr15 82445491 82445867 -21049107 + MER77 LTR ERVL 169 601 -6 6 1214 332 328 32 24 chr15 82446114 82446239 -21048735 - B1F SINE Alu -1 148 23 6 1214 288 282 59 66 chr15 82448131 82448283 -21046691 - RSINE1 SINE B4 -13 152 2 6 1214 2902 64 19 62 chr15 82449610 82449828 -21045146 - MTB LTR MaLR 0 400 196 6 1214 994 136 11 6 chr15 82449828 82450006 -21044968 + CT-rich Low_complexity Low_complexity 1 179 0 6 1214 1074 96 0 27 chr15 82450012 82450162 -21044812 - B1_Mm SINE Alu -1 146 1 6 1214 2902 64 19 62 chr15 82450162 82450354 -21044620 - MTB LTR MaLR -205 195 1 6 1214 264 260 0 25 chr15 82450390 82450469 -21044505 + (TATG)n Simple_repeat Simple_repeat 1 77 0 6 1214 222 156 0 0 chr15 82450477 82450522 -21044452 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1214 339 313 91 21 chr15 82453338 82453524 -21041450 + MER77 LTR ERVL 317 515 -92 6 1214 10104 97 45 91 chr15 82454101 82454119 -21040855 - RLTR22_Mur LTR ERVK -4 1844 1825 6 1214 306 0 0 0 chr15 82454119 82454153 -21040821 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1214 10104 97 45 91 chr15 82454153 82456066 -21038908 - RLTR22_Mur LTR ERVK -24 1824 2 6 1214 396 207 94 94 chr15 82456670 82456798 -21038176 + MT2B LTR ERVL 137 264 -337 6 1214 1016 72 0 0 chr15 82456695 82456833 -21038141 + B1_Mus1 SINE Alu 11 148 0 6 1214 1403 65 0 51 chr15 82456955 82457151 -21037823 + B2_Mm2 SINE B2 3 188 -7 6 1214 498 220 4 4 chr15 82457215 82457351 -21037623 + B1_Mus2 SINE Alu 9 144 -5 6 1214 30712 78 17 12 chr15 82457684 82459266 -21035708 - L1_Mus2 LINE L1 -1 6565 4934 6 1214 8315 33 0 4 chr15 82459266 82460235 -21034739 + L1Md_F2 LINE L1 5618 6582 0 6 1214 30712 105 12 33 chr15 82460235 82464904 -21030070 - L1_Mus2 LINE L1 -950 4933 410 6 1214 1234 204 191 3 chr15 82464913 82465242 -21029732 - MTD LTR MaLR -11 408 18 6 1214 847 150 49 14 chr15 82465370 82465512 -21029462 + B1_Mus1 SINE Alu 1 147 -1 6 1214 192 159 0 68 chr15 82465725 82465799 -21029175 + T-rich Low_complexity Low_complexity 4 72 0 6 1214 242 208 140 70 chr15 82465987 82466112 -21028862 - RLTR13C2 LTR ERVK -58 750 642 6 1214 1247 48 0 0 chr15 82466230 82466377 -21028597 + B1_Mm SINE Alu 1 147 0 6 1214 279 0 0 0 chr15 82466377 82466408 -21028566 + (A)n Simple_repeat Simple_repeat 1 31 0 7 1214 4119 184 73 47 chr15 82467475 82468409 -21026565 + RMER17B LTR ERVK 1 958 0 7 1214 225 276 80 4 chr15 82470032 82470158 -21024816 - B4A SINE B4 -22 143 1 7 1214 495 295 0 0 chr15 82471485 82471685 -21023289 + (TG)n Simple_repeat Simple_repeat 1 200 0 7 1214 278 246 14 0 chr15 82471689 82471758 -21023216 - ID4 SINE ID -11 72 3 7 1214 450 236 36 24 chr15 82474385 82474550 -21020424 + MER77 LTR ERVL 384 550 -57 7 1214 289 337 22 0 chr15 82475044 82475133 -21019841 + RSINE1 SINE B4 13 103 -62 7 1214 1204 68 0 0 chr15 82475321 82475468 -21019506 + B1_Mm SINE Alu 1 147 0 7 1214 2093 127 29 0 chr15 82476012 82476326 -21018648 - ORR1A2 LTR MaLR 0 327 5 7 1214 4988 132 24 5 chr15 82476330 82477176 -21017798 - ORR1A2-int LTR MaLR 0 1963 1102 7 1214 260 200 91 0 chr15 82477186 82477241 -21017733 - B1_Mur3 SINE Alu -21 128 69 7 1214 536 241 27 79 chr15 82477208 82477411 -21017563 - MT2B LTR ERVL -318 283 154 7 1214 2756 164 33 6 chr15 82477404 82477949 -21017025 - ORR1A2-int LTR MaLR -1403 560 1 7 1214 2166 123 9 0 chr15 82477949 82478273 -21016701 - ORR1A2 LTR MaLR 0 327 1 7 1214 391 327 66 31 chr15 82479495 82479754 -21015220 + MER77 LTR ERVL 331 598 -9 7 1214 270 239 206 0 chr15 82480030 82480122 -21014852 - B1F SINE Alu -6 143 33 7 1214 1055 237 59 61 chr15 82480707 82480959 -21014015 + RMER17C LTR ERVK 16 406 -552 7 1214 845 33 67 0 chr15 82480959 82481109 -21013865 + (TC)n Simple_repeat Simple_repeat 1 160 0 7 1214 1055 234 58 71 chr15 82481109 82481320 -21013654 + RMER17C LTR ERVK 188 391 -19 7 1214 254 305 50 8 chr15 82482779 82482898 -21012076 - RSINE1 SINE B4 -40 125 2 7 1214 351 191 0 0 chr15 82484233 82484347 -21010627 + (TG)n Simple_repeat Simple_repeat 1 114 0 7 1214 233 328 24 39 chr15 82487138 82487265 -21007709 + MER77 LTR ERVL 384 508 -99 7 1214 7591 74 11 4 chr15 82487313 82488545 -21006429 - L1_Mus1 LINE L1 -5 6562 5318 7 1214 1145 214 24 24 chr15 82488562 82488854 -21006120 + RMER16 LTR ERVK 242 533 0 7 1214 8996 176 72 54 chr15 82488855 82489645 -21005329 + RMER16-int LTR ERVK 2 803 -4603 7 1214 1220 28 0 0 chr15 82489645 82489787 -21005187 + B1_Mus2 SINE Alu 3 144 -3 7 1214 8996 176 72 54 chr15 82489787 82491006 -21003968 + RMER16-int LTR ERVK 804 2048 -3358 7 1214 7651 151 9 29 chr15 82491005 82492334 -21002640 + RMER16-int LTR ERVK 3808 5110 -296 7 1214 342 238 12 0 chr15 82492335 82492419 -21002555 + RMER16 LTR ERVK 449 533 0 7 1214 2361 192 9 32 chr15 82492419 82492949 -21002025 - ORR1A1-int LTR MaLR -1441 522 5 7 1214 941 137 12 6 chr15 82492957 82493119 -21001855 - ORR1A1 LTR MaLR -8 338 176 7 1214 6395 161 38 4 chr15 82493147 82493349 -21001625 - Lx3B LINE L1 0 6973 6772 7 1214 396 0 0 0 chr15 82493349 82493393 -21001581 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 1214 6395 161 38 4 chr15 82493393 82494334 -21000640 - Lx3B LINE L1 -202 6771 5794 7 1214 10303 73 18 167 chr15 82494334 82494632 -21000342 + RLTR22_Mus LTR ERVK 5 288 -1520 7 1214 290 24 0 45 chr15 82494632 82494676 -21000298 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 7 1214 10303 73 18 167 chr15 82494676 82495761 -20999213 + RLTR22_Mus LTR ERVK 289 1230 -578 7 1214 1254 48 0 0 chr15 82495761 82495908 -20999066 + B1_Mm SINE Alu 1 147 0 7 1214 10303 73 18 167 chr15 82495908 82496639 -20998335 + RLTR22_Mus LTR ERVK 1231 1803 -5 7 1214 3444 142 60 5 chr15 82496661 82497264 -20997710 - L1_Mur1 LINE L1 -79 5807 5172 7 1214 7498 126 18 6 chr15 82497264 82498457 -20996517 + L1_Mur1 LINE L1 3951 5158 -728 7 1214 914 159 0 12 chr15 82498457 82498622 -20996352 - ORR1A1 LTR MaLR -159 168 6 7 1214 308 238 0 0 chr15 82499371 82499434 -20995540 - ID4 SINE ID -19 64 2 7 1214 503 286 114 21 chr15 82500263 82500456 -20994518 + B3 SINE B2 6 216 0 1 1214 246 355 26 26 chr15 82500863 82501089 -20993885 + MER77 LTR ERVL 331 556 -51 2 1214 224 224 0 0 chr15 82501422 82501471 -20993503 - PB1D10 SINE Alu -26 91 43 3 1214 7254 85 8 5 chr15 82502392 82503608 -20991366 - L1Md_F2 LINE L1 0 6582 5363 4 1214 12089 74 2 3 chr15 82503598 82505193 -20989781 - L1Md_F2 LINE L1 -1794 4089 2496 4 1214 3593 112 4 7 chr15 82505223 82505769 -20989205 + RLTR1D LTR ERV1 62 605 0 5 1214 3532 69 2 0 chr15 82505769 82506234 -20988740 - L1Md_F2 LINE L1 -3384 2499 2034 4 1214 9045 6 1 0 chr15 82506226 82507745 -20987229 - L1Md_A LINE L1 0 6582 5062 6 1214 6210 132 53 35 chr15 82507728 82509515 -20985459 - L1Md_F2 LINE L1 -3817 2066 245 4 1214 5901 159 42 45 chr15 82511471 82512584 -20982390 - RLTR13D3 LTR ERVK 0 1114 5 7 1214 315 49 0 0 chr15 82512856 82512897 -20982077 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1214 184 167 0 53 chr15 82514343 82514381 -20980593 - L2 LINE L2 -3129 290 255 9 1214 389 20 20 0 chr15 82514444 82514494 -20980480 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1 1214 226 228 115 42 chr15 82515017 82515113 -20979861 - Tigger7 DNA MER2_type 0 2491 2389 1 1214 2114 123 0 0 chr15 82515135 82515451 -20979523 - ORR1A2 LTR MaLR 0 327 12 1 1214 7007 176 62 15 chr15 82515457 82517032 -20977942 - ORR1A2-int LTR MaLR 0 1963 315 1 1214 1038 131 0 0 chr15 82517028 82517196 -20977778 - ORR1A2 LTR MaLR -159 168 1 1 1214 289 352 29 16 chr15 82517865 82518006 -20976968 + B3 SINE B2 53 192 -6 1 1214 216 0 0 0 chr15 82518128 82518152 -20976822 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1214 310 206 196 0 chr15 82518931 82519023 -20975951 - B1F SINE Alu -7 142 33 1 1214 259 316 67 8 chr15 82521110 82521244 -20973730 - RSINE1 SINE B4 -22 143 2 1 1214 328 98 20 0 chr15 82522573 82522624 -20972350 - HAL1-3A_ME LINE L1 -831 2027 1976 1 1214 192 301 13 64 chr15 82524064 82524142 -20970832 - L2 LINE L2 -3090 329 256 1 1214 312 277 146 28 chr15 82525096 82525308 -20969666 + MER77 LTR ERVL 311 547 -60 1 1214 324 347 75 62 chr15 82525834 82525994 -20968980 + RSINE1 SINE B4 4 165 0 2 1214 355 271 153 20 chr15 82526155 82526456 -20968518 + L1M3 LINE L1 5322 5662 -521 2 1214 2353 100 12 0 chr15 82526658 82526977 -20967997 - ORR1A2 LTR MaLR 0 327 5 2 1214 304 100 40 0 chr15 82526981 82527031 -20967943 - ORR1A2-int LTR MaLR 0 1963 1912 2 1214 848 341 55 26 chr15 82527054 82527632 -20967342 + RLTR4_MM-int LTR ERV1 2412 3123 -4478 2 1214 462 235 21 36 chr15 82527642 82527836 -20967138 - ORR1A2-int LTR MaLR -1055 908 718 2 1214 821 173 26 0 chr15 82527904 82528060 -20966914 - ORR1A2 LTR MaLR -11 316 157 2 1214 8097 153 21 10 chr15 82528097 82529866 -20965108 - Lx3B LINE L1 -3 6970 5187 2 1214 10768 112 5 3 chr15 82529864 82532297 -20962677 + L1_Mus3 LINE L1 4198 6635 -3 2 1214 2413 101 3 0 chr15 82532527 82532853 -20962121 - ORR1A2 LTR MaLR 0 327 1 2 1214 986 154 5 0 chr15 82532853 82533041 -20961933 - ORR1A2-int LTR MaLR 0 1963 1775 2 1214 2338 166 2 20 chr15 82533046 82533453 -20961521 + RMER16-int LTR ERVK 5003 5402 -4 2 1214 1207 69 34 0 chr15 82535229 82535404 -20959570 + RMER17B LTR ERVK 1 181 -777 2 1214 2834 136 41 22 chr15 82535399 82535909 -20959065 + RMER17B LTR ERVK 341 860 -98 2 1214 576 106 0 0 chr15 82536838 82536923 -20958051 + (TG)n Simple_repeat Simple_repeat 1 85 0 2 1214 407 296 91 34 chr15 82539514 82539811 -20955163 + MER77 LTR ERVL 216 529 -78 3 1214 247 266 37 25 chr15 82540373 82540454 -20954520 + RSINE1 SINE B4 4 85 -80 3 1214 29 0 0 0 chr15 82540529 82540558 -20954416 + AT_rich Low_complexity Low_complexity 1 29 0 3 1214 2085 125 25 6 chr15 82541203 82541524 -20953450 - ORR1A2 LTR MaLR 0 327 1 3 1214 8227 181 60 17 chr15 82541524 82542724 -20952250 - ORR1A2-int LTR MaLR 0 1963 714 3 1214 2596 104 39 3 chr15 82542724 82543067 -20951907 - MTB LTR MaLR -1 399 56 3 1214 225 0 0 0 chr15 82543067 82543092 -20951882 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 3 1214 2596 104 39 3 chr15 82543092 82543133 -20951841 - MTB LTR MaLR -345 55 2 3 1214 8227 181 60 17 chr15 82543133 82543577 -20951397 - ORR1A2-int LTR MaLR -1250 713 243 3 1214 1151 87 4 0 chr15 82543577 82543807 -20951167 + (GAAA)n Simple_repeat Simple_repeat 1 231 0 3 1214 8227 181 60 17 chr15 82543807 82544041 -20950933 - ORR1A2-int LTR MaLR -1721 242 4 3 1214 1985 148 22 0 chr15 82544041 82544359 -20950615 - ORR1A2 LTR MaLR -2 325 1 3 1214 212 306 0 0 chr15 82544920 82544982 -20949992 - ID4 SINE ID -19 64 3 3 1214 252 359 77 0 chr15 82545594 82545803 -20949171 + MER77 LTR ERVL 331 555 -52 3 1214 720 163 164 29 chr15 82546642 82546813 -20948161 + RMER17C-int LTR ERVK 1731 1924 -1314 3 1214 2955 134 160 17 chr15 82546810 82547386 -20947588 + RMER17C-int LTR ERVK 2581 3238 0 3 1214 1390 202 47 48 chr15 82547389 82547822 -20947152 + RMER17C LTR ERVK 16 441 -517 3 1214 236 351 59 15 chr15 82549250 82549386 -20945588 - RSINE1 SINE B4 -22 143 2 4 1214 1962 85 11 65 chr15 82549846 82550199 -20944775 - RMER17A LTR ERVK 0 751 418 4 1214 305 113 75 0 chr15 82550199 82550252 -20944722 + RMER3D-int LTR ERVK 2763 2819 -23 4 1214 365 286 70 70 chr15 82550252 82550280 -20944694 - B1_Mur3 SINE Alu 0 149 129 4 1214 3974 164 26 10 chr15 82550280 82550958 -20944016 + RLTR17 LTR ERVK 2 690 -2 4 1214 396 278 74 4 chr15 82550958 82551072 -20943902 - B1_Mus1 SINE Alu -21 128 7 4 1214 527 234 12 110 chr15 82551048 82551221 -20943753 - MT2B LTR ERVL -314 287 132 4 1214 365 193 0 12 chr15 82551149 82551233 -20943741 - ORR1A1-int LTR MaLR -1188 604 522 4 1214 1208 191 104 67 chr15 82551267 82551672 -20943302 + RMER16 LTR ERVK 114 533 0 4 1214 494 149 7 110 chr15 82551672 82551808 -20943166 + RMER16-int LTR ERVK 1 122 -5284 4 1214 541 177 5 86 chr15 82551812 82552034 -20942940 - RMER17C LTR ERVK -128 282 79 4 1214 248 206 0 42 chr15 82552052 82552123 -20942851 - RMER17C LTR ERVK -308 102 35 4 1214 1423 120 5 9 chr15 82552128 82552346 -20942628 + RMER16-int LTR ERVK 3039 3255 -2151 4 1214 6608 131 21 26 chr15 82552345 82553450 -20941524 + RMER16-int LTR ERVK 4015 5113 -293 4 1214 373 202 12 0 chr15 82553452 82553536 -20941438 + RMER16 LTR ERVK 449 533 0 4 1214 2779 178 4 4 chr15 82553536 82554058 -20940916 - ORR1A1-int LTR MaLR -1441 522 1 4 1214 1028 151 0 0 chr15 82554058 82554230 -20940744 - ORR1A1 LTR MaLR 0 346 175 4 1214 324 70 0 0 chr15 82554230 82554273 -20940701 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 4 1214 6354 142 23 26 chr15 82554273 82555920 -20939054 - Lx LINE L1 -15 6639 4987 5 1214 38820 42 0 3 chr15 82555916 82562202 -20932772 - L1Md_T LINE L1 0 6585 223 5 1214 20319 162 15 26 chr15 82562200 82562822 -20932152 - Lx LINE L1 -880 5006 4438 5 1214 1069 35 0 137 chr15 82562822 82562990 -20931984 - B1_Mm SINE Alu 0 147 3 5 1214 20319 162 15 26 chr15 82562990 82563284 -20931690 - Lx LINE L1 -1449 4437 4144 5 1214 5518 120 28 57 chr15 82563284 82564213 -20930761 - RLTR13D6 LTR ERVK 0 902 1 5 1214 20319 157 16 24 chr15 82564213 82567217 -20927757 - Lx LINE L1 -1743 4143 1127 5 1214 1304 127 0 5 chr15 82567217 82567415 -20927559 - L1_Mur1 LINE L1 -270 5616 5420 5 1214 6175 133 32 17 chr15 82567409 82567823 -20927151 + L1_Mur1 LINE L1 4059 4488 -1398 5 1214 1024 60 19 50 chr15 82567823 82567982 -20926992 + L1Md_F2 LINE L1 6429 6582 0 5 1214 6175 133 32 17 chr15 82567982 82568637 -20926337 + L1_Mur1 LINE L1 4489 5144 -742 5 1214 287 143 479 24 chr15 82568637 82568762 -20926212 - ORR1A1 LTR MaLR -139 188 6 4 1214 1296 109 16 0 chr15 82570273 82570457 -20924517 - B2_Mm1a SINE B2 -6 187 1 5 1214 484 272 125 5 chr15 82570806 82570998 -20923976 + B3 SINE B2 2 216 0 5 1214 263 339 75 35 chr15 82571385 82571611 -20923363 + MER77 LTR ERVL 331 565 -42 5 1214 654 282 88 57 chr15 82572864 82573381 -20921593 + IAP-d-int LTR ERVK 2596 3365 -3116 6 1214 549 346 51 46 chr15 82574707 82575337 -20919637 + MERVK26-int LTR ERVK 4510 5142 -1777 6 1215 593 150 0 17 chr15 82575820 82575935 -20919039 + CT-rich Low_complexity Low_complexity 2 114 0 6 1215 250 182 36 0 chr15 82576018 82576073 -20918901 + IAPEY3-int LTR ERVK 7485 7541 -139 6 1215 437 259 96 36 chr15 82578043 82578263 -20916711 + MER77 LTR ERVL 330 562 -45 6 1215 242 331 35 70 chr15 82578808 82578951 -20916023 + RSINE1 SINE B4 23 160 -5 6 1215 772 111 26 0 chr15 82579335 82579452 -20915522 + PB1D9 SINE Alu 1 120 0 6 1215 2077 156 0 0 chr15 82579686 82580013 -20914961 - ORR1A2 LTR MaLR 0 327 1 6 1215 833 169 33 5 chr15 82580013 82580197 -20914777 - ORR1A2-int LTR MaLR 0 1963 1775 6 1215 207 0 0 0 chr15 82580203 82580226 -20914748 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1215 274 123 228 0 chr15 82580244 82580301 -20914673 + RMER16-int LTR ERVK 5011 5080 -326 6 1215 810 62 0 0 chr15 82580308 82580404 -20914570 + L1Md_F2 LINE L1 5486 5581 -302 7 1215 8179 39 7 1 chr15 82580406 82581377 -20913597 + L1Md_F2 LINE L1 5594 6570 -12 7 1215 1664 168 3 50 chr15 82581386 82581507 -20913467 + RMER16-int LTR ERVK 5092 5212 -194 6 1215 1504 17 78 0 chr15 82581507 82581667 -20913307 + B2_Mm1a SINE B2 1 160 -33 7 1215 315 0 0 0 chr15 82581667 82581702 -20913272 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 7 1215 1504 17 78 0 chr15 82581702 82581720 -20913254 + B2_Mm1a SINE B2 161 191 -2 7 1215 1664 168 3 50 chr15 82581720 82581918 -20913056 + RMER16-int LTR ERVK 5213 5396 -10 6 1215 1174 189 117 86 chr15 82581927 82582326 -20912648 + RMER16 LTR ERVK 1 533 0 6 1215 2392 177 45 4 chr15 82582326 82582827 -20912147 - ORR1A2-int LTR MaLR -1441 522 1 6 1215 807 177 38 6 chr15 82582831 82582990 -20911984 - ORR1A2 LTR MaLR -8 318 155 6 1215 485 104 0 13 chr15 82582990 82583068 -20911906 + (TTTTC)n Simple_repeat Simple_repeat 3 79 0 7 1215 3655 174 6 5 chr15 82583070 82583705 -20911269 - Lx3B LINE L1 -1 6972 6337 7 1215 1664 47 0 14 chr15 82583736 82583951 -20911023 - L1_Mus2 LINE L1 0 6566 6355 7 1215 9519 81 14 11 chr15 82583953 82585782 -20909192 + L1_Mus2 LINE L1 4522 6365 -201 7 1215 2931 151 36 12 chr15 82585780 82586117 -20908857 - Lx3B LINE L1 -616 6357 5915 7 1215 243 0 0 0 chr15 82586117 82586144 -20908830 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1215 4595 116 18 19 chr15 82586144 82586831 -20908143 - Lx3B LINE L1 -1059 5914 5232 7 1215 4010 193 87 16 chr15 82586831 82587679 -20907295 - RMER13B LTR ERVK 0 908 1 7 1215 4595 114 17 19 chr15 82587679 82587739 -20907235 - Lx3B LINE L1 -655 5231 5172 7 1215 4944 131 40 5 chr15 82587737 82588675 -20906299 + Lx3B LINE L1 3940 5050 -836 7 1215 465 288 123 20 chr15 82588878 82589073 -20905901 + B3 SINE B2 2 216 0 7 1215 214 269 0 0 chr15 82590045 82590097 -20904877 - PB1D10 SINE Alu -25 92 41 7 1215 213 94 0 0 chr15 82593724 82593756 -20901218 + (TTG)n Simple_repeat Simple_repeat 1 32 0 8 1215 316 311 39 45 chr15 82596550 82596705 -20898269 + MER77 LTR ERVL 378 531 -76 8 1215 269 337 24 0 chr15 82597268 82597351 -20897623 + RSINE1 SINE B4 4 88 -77 8 1215 180 0 0 0 chr15 82597407 82597427 -20897547 + (CA)n Simple_repeat Simple_repeat 2 21 0 8 1215 245 309 64 14 chr15 82597798 82597939 -20897035 + L1M3 LINE L1 5572 5719 -452 8 1215 2017 158 0 0 chr15 82598087 82598410 -20896564 - ORR1A2 LTR MaLR 0 327 5 8 1215 617 179 15 15 chr15 82598414 82598550 -20896424 - ORR1A2-int LTR MaLR 0 1963 1828 8 1215 1131 211 9 4 chr15 82598550 82598779 -20896195 + RMER16-int LTR ERVK 5173 5402 -4 8 1215 1177 210 49 102 chr15 82598782 82599197 -20895777 + RMER16 LTR ERVK 1 516 -17 8 1215 2271 187 40 8 chr15 82599198 82599700 -20895274 - ORR1A2-int LTR MaLR -1445 518 1 8 1215 909 145 0 50 chr15 82599700 82599882 -20895092 - ORR1A2 LTR MaLR 0 327 155 8 1215 7449 177 8 16 chr15 82599910 82601230 -20893744 - Lx3B LINE L1 -6 6967 5659 8 1215 3107 75 2 2 chr15 82601230 82601630 -20893344 - MTB LTR MaLR 0 400 1 8 1215 7449 154 0 10 chr15 82601630 82601981 -20892993 - Lx3B LINE L1 -225 5661 5311 8 1215 4482 35 0 0 chr15 82601985 82602507 -20892467 - L1Md_T LINE L1 0 6582 6061 8 1215 8785 11 0 0 chr15 82602507 82603667 -20891307 + L1Md_T LINE L1 4911 6070 -512 8 1215 666 171 13 20 chr15 82603666 82603815 -20891159 - Lx3B LINE L1 -567 5319 5172 8 1215 6408 153 7 37 chr15 82603815 82604743 -20890231 + L1_Mur1 LINE L1 3951 4861 -1025 9 1215 1204 29 0 0 chr15 82604743 82604880 -20890094 + B1_Mm SINE Alu 2 138 -9 9 1215 261 0 0 0 chr15 82604880 82604909 -20890065 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9 1215 6408 153 7 37 chr15 82604909 82605218 -20889756 + L1_Mur1 LINE L1 4862 5151 -735 9 1215 816 180 27 38 chr15 82605218 82605362 -20889612 - ORR1A2 LTR MaLR -144 183 41 8 1215 2380 147 20 10 chr15 82605362 82605767 -20889207 - RLTR9E LTR ERVK 0 409 1 9 1215 816 180 27 38 chr15 82605767 82605807 -20889167 - ORR1A2 LTR MaLR -287 40 1 8 1215 210 291 0 0 chr15 82606524 82606579 -20888395 - ID4 SINE ID -19 64 10 9 1215 399 286 38 61 chr15 82614464 82614676 -20880298 + MER77 LTR ERVL 312 518 -89 9 1215 482 16 32 0 chr15 82615409 82615471 -20879503 + (TAAA)n Simple_repeat Simple_repeat 2 65 0 9 1215 291 286 27 0 chr15 82615614 82615726 -20879248 + L1M3 LINE L1 5322 5436 -747 9 1215 1915 103 57 0 chr15 82616130 82616431 -20878543 - ORR1A2 LTR MaLR -9 318 1 9 1215 9579 140 114 14 chr15 82616431 82618216 -20876758 - ORR1A2-int LTR MaLR 0 1963 1 9 1215 2378 89 9 0 chr15 82618216 82618540 -20876434 - ORR1A2 LTR MaLR 0 327 1 9 1215 256 296 0 36 chr15 82619072 82619156 -20875818 - ID4 SINE ID 0 83 3 9 1215 250 356 82 0 chr15 82619769 82619977 -20874997 + MER77 LTR ERVL 331 555 -52 1 1215 200 319 0 0 chr15 82620194 82620263 -20874711 + CT-rich Low_complexity Low_complexity 2 70 0 1 1215 249 259 86 0 chr15 82620321 82620402 -20874572 - PB1D10 SINE Alu -27 90 3 1 1215 390 243 56 9 chr15 82622395 82622503 -20872471 - RSINE1 SINE B4 -44 121 9 1 1215 459 0 0 0 chr15 82623806 82623857 -20871117 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1215 600 103 0 0 chr15 82623857 82623963 -20871011 + (TG)n Simple_repeat Simple_repeat 2 108 0 1 1215 258 274 0 0 chr15 82623984 82624046 -20870928 - ID4 SINE ID -19 64 3 1 1215 360 0 0 0 chr15 82624242 82624282 -20870692 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1215 289 265 302 5 chr15 82627012 82627224 -20867750 + B4A SINE B4 2 276 -16 1 1215 932 141 7 32 chr15 82627367 82627521 -20867453 - B1_Mur4 SINE Alu 0 150 1 1 1215 785 264 128 0 chr15 82627709 82627944 -20867030 + B4A SINE B4 10 274 -18 1 1215 372 43 0 0 chr15 82627971 82628017 -20866957 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1215 266 284 33 33 chr15 82629051 82629204 -20865770 + L1MB1 LINE L1 4965 5117 -1023 1 1215 872 118 30 0 chr15 82629233 82629368 -20865606 - B1_Mus1 SINE Alu -8 140 2 1 1215 322 336 48 35 chr15 82629420 82629565 -20865409 + RSINE1 SINE B4 4 150 -15 1 1215 277 288 193 20 chr15 82629710 82630047 -20864927 + L1MB1 LINE L1 5318 5710 -470 1 1215 230 75 50 0 chr15 82630609 82630649 -20864325 + (TTATG)n Simple_repeat Simple_repeat 1 42 0 1 1215 294 234 230 75 chr15 82630729 82630955 -20864019 + L1MB1 LINE L1 5759 6019 -170 1 1215 204 214 0 23 chr15 82632106 82632149 -20862825 + CT-rich Low_complexity Low_complexity 1 42 0 1 1215 872 96 74 0 chr15 82632149 82632284 -20862690 - B1_Mur4 SINE Alu -5 145 1 1 1215 275 291 0 0 chr15 82633707 82633784 -20861190 - ID4 SINE ID -3 80 4 1 1215 890 184 117 61 chr15 82634566 82634780 -20860194 - URR1A DNA MER1_type 0 226 1 1 1215 302 300 37 44 chr15 82635877 82636013 -20858961 + L1MB2 LINE L1 5970 6104 -67 1 1215 606 249 15 26 chr15 82636052 82636237 -20858737 + B3 SINE B2 1 182 -13 1 1215 1296 112 41 0 chr15 82636336 82636532 -20858442 - Lx2 LINE L1 -19 6978 6775 1 1215 3951 95 78 5 chr15 82636532 82637125 -20857849 - Lx2 LINE L1 -355 6642 6007 1 1215 1527 284 113 66 chr15 82637152 82637981 -20856993 + L1MC1 LINE L1 5449 6316 -17 1 1215 201 154 0 0 chr15 82638902 82638941 -20856033 + T-rich Low_complexity Low_complexity 1 39 0 1 1215 214 195 0 0 chr15 82639492 82639533 -20855441 + A-rich Low_complexity Low_complexity 1 41 0 1 1215 25 31 0 0 chr15 82639890 82639922 -20855052 + AT_rich Low_complexity Low_complexity 1 32 0 1 1215 218 135 0 71 chr15 82640091 82640147 -20854827 + (CAGGG)n Simple_repeat Simple_repeat 4 55 0 1 1215 222 118 0 0 chr15 82641227 82641261 -20853713 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 1 1215 486 0 0 0 chr15 82643353 82643407 -20851567 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1215 339 25 0 0 chr15 82643407 82643446 -20851528 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 1215 1183 29 0 0 chr15 82644213 82644349 -20850625 - B1_Mus1 SINE Alu -12 136 1 1 1215 249 33 0 0 chr15 82644356 82644386 -20850588 + (A)n Simple_repeat Simple_repeat 1 30 0 1 1215 1418 45 39 17 chr15 82646677 82646858 -20848116 - B2_Mm2 SINE B2 -9 186 2 1 1215 1193 102 62 0 chr15 82646975 82647152 -20847822 + B2_Mm2 SINE B2 2 189 -6 1 1215 1197 22 0 7 chr15 82647259 82647398 -20847576 + B1_Mm SINE Alu 1 138 -9 1 1215 224 30 30 0 chr15 82647408 82647441 -20847533 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 1 1215 496 44 0 0 chr15 82648668 82648736 -20846238 - B1_Mus1 SINE Alu -77 71 4 1 1215 399 187 10 81 chr15 82648736 82648762 -20846212 - B4 SINE B4 -132 155 69 1 1215 1382 83 0 6 chr15 82649989 82650170 -20844804 + B2_Mm2 SINE B2 2 181 -14 1 1215 4803 42 2 9 chr15 82650171 82650746 -20844228 + L1Md_F2 LINE L1 5999 6569 -13 1 1215 631 207 64 7 chr15 82650880 82651021 -20843953 + B1_Mur3 SINE Alu 1 149 0 1 1215 255 31 0 0 chr15 82651031 82651063 -20843911 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1 1215 23 0 0 0 chr15 82651600 82651623 -20843351 + AT_rich Low_complexity Low_complexity 1 23 0 1 1215 837 131 8 0 chr15 82651638 82651768 -20843206 + B1_Mus2 SINE Alu 14 144 -3 1 1215 250 312 33 67 chr15 82651776 82651896 -20843078 - MER3 DNA MER1_type -90 119 4 1 1215 371 320 54 15 chr15 82652338 82652468 -20842506 + ID_B1 SINE B4 78 212 -12 1 1215 227 109 14 72 chr15 82652519 82652588 -20842386 + GA-rich Low_complexity Low_complexity 3 67 0 1 1215 633 306 119 61 chr15 82652777 82652919 -20842055 + MTD LTR MaLR 17 155 -264 1 1215 850 222 119 0 chr15 82652919 82653095 -20841879 + B3 SINE B2 1 197 -19 1 1215 633 306 119 61 chr15 82653095 82653331 -20841643 + MTD LTR MaLR 156 417 -2 1 1215 385 276 56 89 chr15 82653337 82653516 -20841458 + B4A SINE B4 106 278 -14 1 1215 427 288 3 18 chr15 82653773 82653929 -20841045 + L1MB8 LINE L1 4552 4700 -1440 1 1215 773 131 7 0 chr15 82653957 82654110 -20840864 + (TG)n Simple_repeat Simple_repeat 2 155 0 1 1215 312 173 0 0 chr15 82654152 82654204 -20840770 + L1MB8 LINE L1 4728 4779 -1367 1 1215 642 215 277 12 chr15 82654331 82654488 -20840486 + L1MB8 LINE L1 4988 5168 -978 1 1215 822 282 34 0 chr15 82654488 82654697 -20840277 + ID_B1 SINE B4 5 220 -4 1 1215 1135 253 253 26 chr15 82654697 82655506 -20839468 + L1MB8 LINE L1 5169 6183 -1 1 1215 26 30 0 0 chr15 82656212 82656245 -20838729 + AT_rich Low_complexity Low_complexity 1 33 0 1 1215 380 161 62 157 chr15 82657242 82657369 -20837605 + B1_Mus1 SINE Alu 32 143 -5 1 1215 234 0 0 0 chr15 82657369 82657395 -20837579 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 1 1215 683 219 105 16 chr15 82658066 82658256 -20836718 + B3 SINE B2 1 207 -9 1 1215 363 311 54 12 chr15 82658793 82658959 -20836015 + MLT1D LTR MaLR 264 436 -69 1 1215 186 71 0 0 chr15 82658968 82658996 -20835978 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 1215 261 0 0 0 chr15 82659380 82659409 -20835565 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1215 1213 47 0 7 chr15 82659409 82659558 -20835416 - B1_Mus1 SINE Alu 0 148 1 1 1215 362 233 107 0 chr15 82659568 82659671 -20835303 + B1_Mur3 SINE Alu 19 132 -17 1 1215 180 0 0 0 chr15 82659674 82659694 -20835280 + (CAAT)n Simple_repeat Simple_repeat 1 20 0 1 1215 290 159 0 0 chr15 82660000 82660044 -20834930 - ID_B1 SINE B4 -6 218 175 1 1215 244 206 95 0 chr15 82660044 82660057 -20834917 - PB1D7 SINE Alu 0 101 49 1 1215 377 280 36 27 chr15 82660070 82660180 -20834794 - B1_Mur1 SINE Alu -32 117 7 1 1215 922 86 191 7 chr15 82661213 82661365 -20833609 + B2_Mm2 SINE B2 2 181 -14 1 1215 690 65 0 0 chr15 82662268 82662360 -20832614 + (CAGGA)n Simple_repeat Simple_repeat 4 95 0 1 1215 275 230 0 34 chr15 82662373 82662490 -20832484 + GA-rich Low_complexity Low_complexity 4 116 0 1 1215 198 0 0 0 chr15 82662720 82662742 -20832232 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1215 210 71 0 0 chr15 82662948 82662976 -20831998 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1215 186 43 0 0 chr15 82663347 82663370 -20831604 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 1 1215 381 78 0 0 chr15 82663370 82663421 -20831553 - B1_Mus2 SINE Alu -25 122 72 1 1215 992 75 12 30 chr15 82663624 82663790 -20831184 + (TTTC)n Simple_repeat Simple_repeat 4 166 0 1 1215 1584 37 16 5 chr15 82665463 82665653 -20829321 + B2_Mm1a SINE B2 1 192 -1 1 1215 542 231 41 0 chr15 82666388 82666509 -20828465 - B3 SINE B2 -89 127 2 1 1215 873 263 0 37 chr15 82666512 82666729 -20828245 - B4A SINE B4 -62 230 22 1 1215 503 261 42 14 chr15 82666738 82666882 -20828092 - B1F1 SINE Alu -1 148 1 1 1215 207 0 0 0 chr15 82667011 82667034 -20827940 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1215 311 337 60 53 chr15 82668732 82669017 -20825957 + B4A SINE B4 1 287 -5 1 1215 1239 55 0 33 chr15 82669385 82669536 -20825438 + B1_Mm SINE Alu 2 147 0 1 1215 1219 132 27 16 chr15 82669706 82669891 -20825083 + B2_Mm1t SINE B2 2 188 -5 1 1215 441 253 32 0 chr15 82670130 82670225 -20824749 - B1F1 SINE Alu -51 98 1 1 1215 349 170 0 0 chr15 82671243 82671296 -20823678 - ID_B1 SINE B4 -38 186 134 1 1215 284 125 21 0 chr15 82671253 82671301 -20823673 - PB1D10 SINE Alu -22 95 47 1 1215 349 250 141 12 chr15 82671460 82671545 -20823429 + RSINE1 SINE B4 2 97 -68 1 1215 181 340 0 36 chr15 82672087 82672142 -20822832 + L2 LINE L2 2806 2858 -561 1 1215 647 177 36 65 chr15 82672362 82672501 -20822473 + B1_Mur2 SINE Alu 5 139 -10 1 1215 261 0 0 0 chr15 82672501 82672530 -20822444 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1215 318 148 0 0 chr15 82672548 82672602 -20822372 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 1 1215 245 290 0 61 chr15 82672602 82672668 -20822306 + ID2 SINE ID 21 82 -1 1 1215 191 325 51 25 chr15 82673338 82673417 -20821557 - MIRm SINE MIR -89 187 107 1 1215 1409 80 5 26 chr15 82673567 82673760 -20821214 - B2_Mm2 SINE B2 -5 190 2 1 1215 456 220 0 62 chr15 82674016 82674113 -20820861 + ORR1D2 LTR MaLR 1 91 -279 1 1215 595 257 56 0 chr15 82674150 82674294 -20820680 + ORR1D2 LTR MaLR 211 362 -8 1 1215 22 35 0 0 chr15 82674700 82674729 -20820245 + AT_rich Low_complexity Low_complexity 1 29 0 1 1215 415 222 172 0 chr15 82675345 82675444 -20819530 - PB1D10 SINE Alu -1 116 1 1 1215 224 309 18 18 chr15 82675489 82675545 -20819429 + PB1D10 SINE Alu 1 56 -61 1 1215 2013 194 58 18 chr15 82675602 82676000 -20818974 + MTD LTR MaLR 1 414 -5 1 1215 670 159 99 38 chr15 82676001 82676132 -20818842 + B1_Mur4 SINE Alu 1 139 -11 1 1215 735 95 0 0 chr15 82676178 82676283 -20818691 + (GGAA)n Simple_repeat Simple_repeat 4 108 0 2 1215 8787 26 0 0 chr15 82676383 82677340 -20817634 + L1Md_A LINE L1 5625 6581 -1 2 1215 1220 48 0 26 chr15 82677352 82677503 -20817471 + B1_Mm SINE Alu 1 147 0 2 1215 297 75 0 0 chr15 82677503 82677543 -20817431 + (A)n Simple_repeat Simple_repeat 1 40 0 2 1215 913 156 13 33 chr15 82677555 82677707 -20817267 + B1_Mur3 SINE Alu 1 149 0 2 1215 1703 162 76 57 chr15 82677782 82678149 -20816825 + ORR1D1 LTR MaLR 1 374 0 2 1215 430 306 95 16 chr15 82678149 82678275 -20816699 - RSINE1 SINE B4 -1 164 29 2 1215 204 111 0 0 chr15 82678348 82678384 -20816590 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 1215 300 137 0 0 chr15 82678436 82678487 -20816487 + (CGTG)n Simple_repeat Simple_repeat 1 51 0 2 1215 620 189 0 28 chr15 82678881 82678990 -20815984 - B1_Mur1 SINE Alu 0 149 44 2 1215 294 222 97 0 chr15 82679035 82679107 -20815867 + PB1D10 SINE Alu 27 105 -12 1 1215 1244 55 14 0 chr15 82679732 82679877 -20815097 + B1_Mus1 SINE Alu 2 148 0 2 1215 1598 241 102 3 chr15 82680258 82680632 -20814342 + MTD LTR MaLR 1 411 -8 2 1215 570 219 86 0 chr15 82681297 82681425 -20813549 + B1_Mus1 SINE Alu 3 141 -7 2 1215 545 230 18 9 chr15 82681434 82681548 -20813426 + PB1D10 SINE Alu 3 117 0 2 1215 21 36 0 0 chr15 82681605 82681633 -20813341 + AT_rich Low_complexity Low_complexity 1 28 0 2 1215 447 157 0 0 chr15 82686626 82686715 -20808259 + (CTG)n Simple_repeat Simple_repeat 1 89 0 2 1215 185 94 31 0 chr15 82686893 82686925 -20808049 + (GGA)n Simple_repeat Simple_repeat 1 33 0 2 1215 447 68 0 0 chr15 82687103 82687162 -20807812 + (CTG)n Simple_repeat Simple_repeat 1 59 0 2 1215 1020 141 27 16 chr15 82688530 82688558 -20806416 - B2_Mm1t SINE B2 -3 190 160 2 1215 216 0 0 0 chr15 82688558 82688582 -20806392 + (ATTG)n Simple_repeat Simple_repeat 2 25 0 2 1215 1236 65 0 0 chr15 82688582 82688740 -20806234 - B2_Mm2 SINE B2 -34 159 2 2 1215 250 217 0 0 chr15 82689953 82689999 -20804975 + LTR33 LTR ERVL 468 513 -2 2 1215 590 198 24 57 chr15 82690327 82690450 -20804524 - PB1D7 SINE Alu -1 119 1 2 1215 1456 92 16 0 chr15 82690453 82690638 -20804336 - B2_Mm2 SINE B2 -6 189 2 2 1215 223 98 73 0 chr15 82690751 82690792 -20804182 + T-rich Low_complexity Low_complexity 4 47 0 2 1215 1181 76 21 0 chr15 82690953 82691097 -20803877 + B1_Mus2 SINE Alu 1 147 0 2 1215 570 67 0 0 chr15 82692435 82692510 -20802464 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 2 1215 443 282 0 68 chr15 82692525 82692643 -20802331 + PB1D10 SINE Alu 1 110 -7 2 1215 625 238 0 37 chr15 82692679 82692814 -20802160 + B1_Mur1 SINE Alu 1 130 -19 2 1215 186 156 47 0 chr15 82693154 82693218 -20801756 + (TA)n Simple_repeat Simple_repeat 2 68 0 2 1215 800 194 21 21 chr15 82693480 82693622 -20801352 + B1_Mur3 SINE Alu 1 142 -7 2 1215 443 306 211 14 chr15 82695023 82695454 -20799520 - L1MC4 LINE L1 -1019 7023 6508 2 1215 457 98 183 4 chr15 82695641 82695750 -20799224 - B2_Mm2 SINE B2 0 195 47 2 1215 1253 82 12 6 chr15 82695767 82695938 -20799036 - B2_Mm2 SINE B2 -22 173 2 2 1215 356 250 13 0 chr15 82696167 82696239 -20798735 - PB1D10 SINE Alu -8 109 37 2 1215 1902 105 46 59 chr15 82696239 82696562 -20798412 + ORR1A2 LTR MaLR 1 319 -8 2 1215 4205 104 148 44 chr15 82696698 82697000 -20797974 + RMER17B LTR ERVK 1 318 -640 2 1215 1236 54 0 20 chr15 82697000 82697150 -20797824 - B1_Mus2 SINE Alu 0 147 1 2 1215 4205 104 148 44 chr15 82697150 82697591 -20797383 + RMER17B LTR ERVK 319 821 -137 2 1215 985 55 117 0 chr15 82698543 82698671 -20796303 + B1_Mus1 SINE Alu 2 144 -4 2 1215 498 295 124 36 chr15 82698739 82698989 -20795985 - L2 LINE L2 -556 2863 2592 2 1215 192 316 69 39 chr15 82699182 82699284 -20795690 - L2 LINE L2 -967 2452 2348 2 1215 301 269 36 18 chr15 82699323 82699433 -20795541 + MER112 DNA MER1_type 34 145 -116 2 1215 613 249 139 0 chr15 82699436 82699609 -20795365 + B3A SINE B2 2 198 0 2 1215 1700 239 89 24 chr15 82699714 82699956 -20795018 + Lx9 LINE L1 6399 6650 -994 2 1215 1582 136 217 10 chr15 82699956 82700260 -20794714 + ORR1B2 LTR MaLR 1 367 0 2 1215 1700 239 89 24 chr15 82700260 82700479 -20794495 + Lx9 LINE L1 6651 6890 -754 2 1215 946 51 8 0 chr15 82700509 82700627 -20794347 - B1_Mm SINE Alu 0 147 29 2 1215 2199 239 65 65 chr15 82700630 82701385 -20793589 + Lx9 LINE L1 6884 7638 -6 2 1215 604 194 81 27 chr15 82701944 82702055 -20792919 + B1_Mur2 SINE Alu 1 117 -32 2 1215 1760 21 0 30 chr15 82702055 82702253 -20792721 + B2_Mm1t SINE B2 2 193 0 2 1215 1416 60 21 32 chr15 82702427 82702616 -20792358 - B2_Mm2 SINE B2 -7 188 2 2 1215 374 222 94 16 chr15 82702758 82702886 -20792088 - Lx9 LINE L1 -6 7638 7501 2 1215 639 248 0 0 chr15 82703154 82703275 -20791699 - B1_Mur2 SINE Alu -27 122 2 2 1215 239 271 0 96 chr15 82703192 82703286 -20791688 - MT2B LTR ERVL -362 239 155 2 1215 368 278 20 92 chr15 82703373 82703545 -20791429 - PB1D7 SINE Alu 0 311 22 2 1215 193 283 158 32 chr15 82703575 82703670 -20791304 - MIRc SINE MIR -108 160 54 2 1215 1811 26 0 0 chr15 82703784 82703977 -20790997 - B2_Mm1a SINE B2 0 193 1 2 1215 482 296 114 7 chr15 82705201 82705375 -20789599 - B4 SINE B4 -94 198 3 2 1215 632 152 8 0 chr15 82705428 82705546 -20789428 + (CATA)n Simple_repeat Simple_repeat 2 120 0 2 1215 445 211 22 0 chr15 82705728 82705818 -20789156 + PB1D9 SINE Alu 29 120 0 2 1215 231 316 0 0 chr15 82705819 82705876 -20789098 + G-rich Low_complexity Low_complexity 5 61 0 2 1215 421 297 91 62 chr15 82705890 82706066 -20788908 + B3A SINE B2 7 187 -11 2 1215 29 0 0 0 chr15 82706233 82706262 -20788712 + AT_rich Low_complexity Low_complexity 1 29 0 2 1216 22 80 0 0 chr15 82706612 82706662 -20788312 + AT_rich Low_complexity Low_complexity 1 50 0 2 1216 270 114 56 28 chr15 82706809 82706859 -20788115 + T-rich Low_complexity Low_complexity 24 76 0 2 1216 1113 62 7 33 chr15 82706859 82707009 -20787965 - B1_Mus1 SINE Alu 0 148 3 2 1216 270 114 56 28 chr15 82707009 82707030 -20787944 + T-rich Low_complexity Low_complexity 3 23 0 2 1216 373 299 89 11 chr15 82707879 82708058 -20786916 - MIR SINE MIR -3 259 67 2 1216 831 167 50 7 chr15 82708074 82708213 -20786761 + B1_Mur3 SINE Alu 4 148 -1 2 1216 1135 205 60 0 chr15 82708234 82708434 -20786540 + B3 SINE B2 5 216 0 2 1216 1203 85 0 0 chr15 82708455 82708596 -20786378 + B1_Mus1 SINE Alu 1 141 -7 2 1216 450 53 0 0 chr15 82708596 82708653 -20786321 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 2 1216 1270 55 0 0 chr15 82708814 82708960 -20786014 + B1_Mm SINE Alu 2 147 0 2 1216 1143 0 68 0 chr15 82708989 82709270 -20785704 + (GGGAGA)n Simple_repeat Simple_repeat 1 299 0 2 1216 1049 44 0 7 chr15 82709275 82709411 -20785563 + (GAGAA)n Simple_repeat Simple_repeat 1 135 0 2 1216 1667 11 15 64 chr15 82709492 82709694 -20785280 + B2_Mm1a SINE B2 2 193 0 2 1216 186 71 0 0 chr15 82709696 82709724 -20785250 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1216 338 298 38 64 chr15 82710165 82710291 -20784683 - PB1D10 SINE Alu -25 124 1 2 1216 288 288 0 8 chr15 82710413 82710432 -20784542 + ORR1B1-int LTR MaLR 630 647 -862 2 1216 755 200 8 0 chr15 82710432 82710557 -20784417 + B1_Mus2 SINE Alu 1 126 -21 2 1216 994 210 19 42 chr15 82710880 82711094 -20783880 - B3 SINE B2 -3 213 5 2 1216 1227 118 215 0 chr15 82711810 82711996 -20782978 + URR1A DNA MER1_type 1 226 0 2 1216 751 277 83 5 chr15 82712227 82712419 -20782555 + B4 SINE B4 72 278 -14 2 1216 552 237 6 55 chr15 82712531 82712591 -20782383 + L1MB4 LINE L1 5417 5474 -690 2 1216 1162 97 66 38 chr15 82712591 82712774 -20782200 + B2_Mm2 SINE B2 2 189 -6 2 1216 552 251 37 53 chr15 82712774 82712944 -20782030 + L1MB4 LINE L1 5475 5655 -523 2 1216 608 259 17 83 chr15 82712944 82713125 -20781849 - ID_B1 SINE B4 -45 179 11 2 1216 1061 255 73 15 chr15 82713199 82713583 -20781391 + L1MB4 LINE L1 5782 6177 -2 2 1216 1036 66 0 0 chr15 82713770 82713907 -20781067 - B1_Mus2 SINE Alu 0 147 11 2 1216 342 197 63 38 chr15 82713987 82714066 -20780908 + B1F2 SINE Alu 1 81 -68 2 1216 874 222 75 73 chr15 82714070 82714445 -20780529 + L1MC2 LINE L1 5850 6227 -117 2 1216 373 244 26 0 chr15 82714445 82714523 -20780451 + B3 SINE B2 122 201 -15 2 1216 470 203 149 25 chr15 82714528 82714649 -20780325 + B1_Mm SINE Alu 5 140 -7 2 1216 207 0 0 0 chr15 82714817 82714840 -20780134 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1216 244 254 27 137 chr15 82714854 82714927 -20780047 + ID4_ SINE ID 8 72 -11 2 1216 1148 132 55 0 chr15 82714984 82715166 -20779808 + B2_Mm1t SINE B2 1 192 -1 2 1216 647 173 142 0 chr15 82715178 82715305 -20779669 + B1_Mus1 SINE Alu 3 147 -1 2 1216 276 316 211 13 chr15 82715801 82716005 -20778969 - L2a LINE L2 -9 3417 3133 2 1216 4469 40 2 0 chr15 82716313 82716815 -20778159 + L1_Mus1 LINE L1 6065 6567 0 2 1216 1227 54 0 13 chr15 82717487 82717637 -20777337 + B1_Mus1 SINE Alu 1 148 0 2 1216 781 262 107 30 chr15 82717904 82718101 -20776873 - B4A SINE B4 -79 213 2 2 1216 472 317 70 5 chr15 82718636 82718823 -20776151 + MIR SINE MIR 17 215 -47 2 1216 199 330 32 157 chr15 82719295 82719575 -20775399 + L2c LINE L2 3055 3299 -76 2 1216 411 197 0 0 chr15 82719885 82719951 -20775023 - tRNA-Ala-GCY_ tRNA tRNA -9 66 1 2 1216 1016 142 59 16 chr15 82720119 82720305 -20774669 + B2_Mm2 SINE B2 1 194 -1 2 1216 1787 167 46 9 chr15 82720497 82720823 -20774151 + ORR1A1 LTR MaLR 1 338 -8 2 1216 651 233 0 30 chr15 82721426 82721559 -20773415 - B1_Mur2 SINE Alu 0 149 21 3 1216 432 0 0 0 chr15 82721567 82721615 -20773359 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1216 310 314 29 64 chr15 82721617 82721793 -20773181 - B4A SINE B4 0 165 1 3 1216 833 281 86 10 chr15 82721818 82722016 -20772958 - B4A SINE B4 -2 290 78 3 1216 609 159 114 45 chr15 82722010 82722142 -20772832 - B1_Mur1 SINE Alu 0 149 9 3 1216 631 90 254 8 chr15 82722293 82722427 -20772547 + URR1A DNA MER1_type 59 225 -1 3 1216 414 248 104 37 chr15 82722495 82722629 -20772345 + ID_B1 SINE B4 80 222 -2 3 1216 864 301 65 23 chr15 82722689 82723043 -20771931 - L1ME2 LINE L1 -280 5884 5516 3 1216 912 174 171 16 chr15 82723519 82723706 -20771268 + B3 SINE B2 1 216 0 3 1216 289 250 165 10 chr15 82724034 82724131 -20770843 + PB1D7 SINE Alu 9 120 0 3 1216 186 43 0 0 chr15 82724139 82724162 -20770812 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1216 790 206 76 27 chr15 82724475 82724660 -20770314 + B3A SINE B2 1 194 -4 3 1216 246 279 0 0 chr15 82724758 82724819 -20770155 + B4 SINE B4 28 88 -204 3 1216 372 246 109 0 chr15 82724924 82725059 -20769915 + B1_Mur4 SINE Alu 9 146 -3 3 1216 818 71 133 0 chr15 82725063 82725176 -20769798 + B1_Mus1 SINE Alu 2 129 -19 3 1216 229 341 23 41 chr15 82725425 82725512 -20769462 - YREP_Mm Unknown Unknown -1421 391 224 3 1216 437 214 24 0 chr15 82725512 82725596 -20769378 + ID_B1 SINE B4 90 175 -49 3 1216 305 64 0 0 chr15 82725590 82725637 -20769337 - U5 snRNA snRNA -69 47 1 3 1216 373 278 46 9 chr15 82726060 82726169 -20768805 - PB1D10 SINE Alu 0 117 5 3 1216 210 37 0 0 chr15 82726416 82726443 -20768531 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1216 492 197 72 1 chr15 82726443 82726546 -20768428 - B1_Mur2 SINE Alu -10 110 1 3 1216 270 0 0 0 chr15 82727260 82727290 -20767684 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1216 203 56 56 0 chr15 82728053 82728089 -20766885 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 3 1216 298 328 46 12 chr15 82728710 82728896 -20766078 - MIRc SINE MIR -7 201 9 3 1216 198 0 0 0 chr15 82729183 82729205 -20765769 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 1216 31 112 0 0 chr15 82729939 82730082 -20764892 + GC_rich Low_complexity Low_complexity 1 143 0 3 1216 216 100 0 77 chr15 82730299 82730364 -20764610 + (CGGGG)n Simple_repeat Simple_repeat 4 63 0 3 1216 1011 148 114 0 chr15 82731008 82731210 -20763764 - URR1B DNA MER1_type 0 225 1 3 1216 186 273 55 0 chr15 82732654 82732709 -20762265 - MIRc SINE MIR -128 140 83 3 1216 354 228 108 10 chr15 82732722 82732824 -20762150 - PB1D10 SINE Alu -5 112 1 3 1216 185 0 40 0 chr15 82733881 82733906 -20761068 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 1216 429 297 70 16 chr15 82734046 82734210 -20760764 - MIR SINE MIR -21 187 17 3 1216 337 261 116 8 chr15 82734697 82734855 -20760119 - MIR SINE MIR -74 188 13 3 1216 412 209 50 0 chr15 82734892 82735005 -20759969 - MIR SINE MIR -42 226 110 3 1216 191 179 30 0 chr15 82736276 82736338 -20758636 - L2c LINE L2 -303 3084 3020 3 1216 240 382 21 32 chr15 82737356 82737545 -20757429 - MIR SINE MIR -31 231 45 3 1216 221 351 78 0 chr15 82738623 82738700 -20756274 - MIRb SINE MIR -74 194 112 3 1216 1305 42 95 0 chr15 82739355 82739523 -20755451 + B2_Mm2 SINE B2 1 184 -11 3 1216 192 336 83 38 chr15 82739661 82739794 -20755180 + L2c LINE L2 3027 3165 -222 3 1216 191 298 102 24 chr15 82743383 82743510 -20751464 - MIR SINE MIR -17 245 109 3 1216 240 194 0 12 chr15 82744122 82744190 -20750784 + L2b LINE L2 3023 3090 -297 3 1216 284 351 52 52 chr15 82744246 82744420 -20750554 + MIR SINE MIR 14 187 -75 3 1216 344 286 70 102 chr15 82744531 82744549 -20750425 + B4 SINE B4 76 214 -78 3 1216 787 120 0 31 chr15 82744549 82744678 -20750296 + B1_Mur1 SINE Alu 13 137 -12 3 1216 357 24 0 0 chr15 82744678 82744720 -20750254 + (GAAAA)n Simple_repeat Simple_repeat 4 45 0 3 1216 834 39 0 0 chr15 82744720 82744821 -20750153 + (GGGGA)n Simple_repeat Simple_repeat 5 106 0 3 1216 344 286 70 102 chr15 82744821 82744859 -20750115 + B4 SINE B4 215 255 -37 3 1216 535 326 22 11 chr15 82744903 82745083 -20749891 + MIR SINE MIR 41 222 -40 3 1216 413 307 47 16 chr15 82745775 82745955 -20749019 - MIR SINE MIR -82 186 2 3 1216 212 316 20 0 chr15 82745984 82746082 -20748892 + (TCCA)n Simple_repeat Simple_repeat 2 101 0 3 1216 208 288 0 14 chr15 82746279 82746353 -20748621 + (CATG)n Simple_repeat Simple_repeat 3 75 0 3 1216 257 232 91 13 chr15 82747011 82747098 -20747876 - MIRc SINE MIR -90 172 81 3 1216 193 175 25 0 chr15 82747330 82747370 -20747604 - MIRb SINE MIR -94 174 134 3 1216 185 250 0 0 chr15 82749697 82749737 -20745237 - MIRc SINE MIR -115 153 114 3 1216 202 261 132 26 chr15 82750683 82750797 -20744177 + MIRm SINE MIR 37 162 -114 3 1216 269 297 35 18 chr15 82750904 82751017 -20743957 - MIRb SINE MIR -61 207 93 3 1216 185 290 94 31 chr15 82753060 82753156 -20741818 - MIR SINE MIR -72 136 35 3 1216 522 213 184 0 chr15 82753297 82753438 -20741536 + B3A SINE B2 2 168 -30 3 1216 531 0 0 0 chr15 82753482 82753541 -20741433 + (TA)n Simple_repeat Simple_repeat 2 60 0 3 1216 189 284 53 26 chr15 82754268 82754344 -20740630 - L4 LINE RTE -1867 162 85 3 1216 284 242 15 15 chr15 82755087 82755221 -20739753 + GA-rich Low_complexity Low_complexity 1 134 0 3 1216 205 372 0 0 chr15 82755228 82755314 -20739660 + G-rich Low_complexity Low_complexity 1 86 0 3 1216 227 262 24 144 chr15 82755639 82755764 -20739210 - MER102b DNA MER1_type -187 154 45 3 1216 236 279 143 9 chr15 82757518 82757623 -20737351 - MIRm SINE MIR -125 151 33 3 1216 233 375 0 0 chr15 82758361 82758473 -20736501 + GA-rich Low_complexity Low_complexity 3 114 0 3 1216 180 0 0 0 chr15 82760676 82760696 -20734278 + (CAAAT)n Simple_repeat Simple_repeat 3 22 0 3 1216 1272 240 108 17 chr15 82761080 82761424 -20733550 + MTE2a LTR MaLR 4 378 -1 3 1216 221 288 0 15 chr15 82762178 82762245 -20732729 - L2a LINE L2 -1 3425 3360 3 1216 323 200 0 15 chr15 82762610 82762676 -20732298 + 4.5SRNA scRNA scRNA 26 90 -4 3 1216 831 54 0 0 chr15 82762619 82762730 -20732244 + B1_Mm SINE Alu 37 147 0 3 1216 294 300 25 0 chr15 82762781 82762861 -20732113 - RSINE1 SINE B4 -43 122 41 3 1216 200 194 0 0 chr15 82762931 82762967 -20732007 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 3 1216 338 230 17 28 chr15 82762967 82763146 -20731828 + (CA)n Simple_repeat Simple_repeat 2 178 0 3 1216 479 178 7 0 chr15 82763172 82763307 -20731667 + (CA)n Simple_repeat Simple_repeat 2 137 0 3 1216 198 242 36 43 chr15 82764275 82764343 -20730631 + MIR SINE MIR 97 168 -100 3 1216 789 97 0 0 chr15 82764767 82764901 -20730073 + (TC)n Simple_repeat Simple_repeat 2 135 0 3 1216 333 0 0 0 chr15 82764901 82764937 -20730037 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1216 195 162 0 0 chr15 82765730 82765767 -20729207 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1216 216 273 30 0 chr15 82766211 82766277 -20728697 + GA-rich Low_complexity Low_complexity 2 69 0 3 1216 336 259 38 8 chr15 82766278 82766394 -20728580 + PB1D10 SINE Alu 1 123 -24 3 1216 233 275 215 43 chr15 82766509 82766718 -20728256 + ORR1E LTR MaLR 41 285 -74 3 1216 324 94 0 0 chr15 82766897 82766950 -20728024 + (TGAA)n Simple_repeat Simple_repeat 4 56 0 3 1216 220 324 27 0 chr15 82767762 82767836 -20727138 + MIRb SINE MIR 99 174 -94 3 1216 274 315 23 15 chr15 82768314 82768446 -20726528 + L2b LINE L2 2989 3121 -254 3 1216 228 233 0 0 chr15 82769109 82769152 -20725822 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 3 1216 1498 265 13 39 chr15 82774354 82774743 -20720231 + MTE2a LTR MaLR 1 379 0 3 1216 267 31 0 0 chr15 82775540 82775572 -20719402 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1216 1079 185 95 0 chr15 82775722 82775911 -20719063 + B3 SINE B2 3 209 -7 3 1216 189 242 59 29 chr15 82775974 82776042 -20718932 + MIR3 SINE MIR 88 157 -51 3 1216 181 299 229 19 chr15 82776929 82777086 -20717888 - L2b LINE L2 -218 3157 2968 3 1216 222 216 0 0 chr15 82777541 82777615 -20717359 + (CATG)n Simple_repeat Simple_repeat 2 75 0 3 1216 213 254 121 48 chr15 82779430 82779554 -20715420 - MIR SINE MIR -118 144 12 3 1216 282 160 0 0 chr15 82780078 82780128 -20714846 + CT-rich Low_complexity Low_complexity 1 50 0 3 1216 782 204 14 0 chr15 82780133 82780275 -20714699 - B1_Mur2 SINE Alu -5 144 1 3 1216 428 298 68 61 chr15 82780549 82780772 -20714202 + MIR SINE MIR 15 245 -23 3 1216 249 287 88 33 chr15 82782221 82782372 -20712602 + L2b LINE L2 3020 3158 -229 3 1216 195 162 0 0 chr15 82783582 82783619 -20711355 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 3 1216 245 274 74 58 chr15 82783703 82783894 -20711080 - L2a LINE L2 -57 3369 3135 3 1216 509 271 101 39 chr15 82784593 82784630 -20710344 + ID SINE ID 5 44 -180 3 1216 276 30 0 0 chr15 82784630 82784663 -20710311 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1216 509 271 101 39 chr15 82784663 82784832 -20710142 + ID_B1 SINE B4 45 224 0 3 1216 233 311 124 45 chr15 82787261 82787506 -20707468 + L2a LINE L2 2910 3169 -206 3 1216 211 355 20 41 chr15 82787915 82788159 -20706815 + L2b LINE L2 2918 3156 -219 3 1216 440 361 87 43 chr15 82788168 82788559 -20706415 - MLT1K LTR MaLR 0 595 188 3 1216 222 345 133 0 chr15 82789621 82789734 -20705240 - MIR SINE MIR -115 147 20 4 1216 399 267 133 33 chr15 82790052 82790172 -20704802 + ID_B1 SINE B4 81 212 -12 4 1216 460 114 48 0 chr15 82790723 82790828 -20704146 + (CAGAGA)n Simple_repeat Simple_repeat 3 112 0 4 1216 250 159 48 0 chr15 82790875 82790938 -20704036 + GA-rich Low_complexity Low_complexity 4 69 0 4 1216 199 143 20 39 chr15 82791387 82791438 -20703536 + GA-rich Low_complexity Low_complexity 5 54 0 4 1216 392 291 27 4 chr15 82793507 82793651 -20701323 + MIRb SINE MIR 8 156 -112 4 1216 27 49 0 0 chr15 82793798 82793839 -20701135 + GC_rich Low_complexity Low_complexity 1 41 0 4 1216 126 77 0 0 chr15 82793888 82794161 -20700813 + GC_rich Low_complexity Low_complexity 1 273 0 4 1216 364 205 30 49 chr15 82794227 82794391 -20700583 + G-rich Low_complexity Low_complexity 4 164 0 4 1216 21 71 0 0 chr15 82794396 82794438 -20700536 + GC_rich Low_complexity Low_complexity 1 42 0 4 1216 285 282 73 110 chr15 82794529 82794837 -20700137 + Charlie8 DNA MER1_type 10 300 -2128 4 1216 244 287 60 5 chr15 82795002 82795112 -20699862 + L2a LINE L2 3257 3377 -10 4 1216 222 77 0 88 chr15 82795774 82795831 -20699143 + C-rich Low_complexity Low_complexity 3 54 0 4 1216 195 129 0 0 chr15 82795839 82795870 -20699104 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1216 180 77 0 0 chr15 82795870 82795896 -20699078 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1216 277 306 102 82 chr15 82796282 82796478 -20698496 + MIRb SINE MIR 23 222 -46 4 1216 426 208 0 120 chr15 82796499 82796528 -20698446 + MT2B LTR ERVL 140 151 -450 4 1216 917 71 0 0 chr15 82796528 82796655 -20698319 + B1_Mus1 SINE Alu 1 127 -21 4 1216 231 114 0 0 chr15 82796655 82796690 -20698284 + (GGA)n Simple_repeat Simple_repeat 3 37 0 4 1216 410 350 65 39 chr15 82796690 82796922 -20698052 + MIRb SINE MIR 3 240 -28 4 1216 679 204 16 38 chr15 82797603 82797795 -20697179 - B3 SINE B2 -6 189 2 4 1216 668 255 0 0 chr15 82797930 82798071 -20696903 - ID_B1 SINE B4 -5 219 79 4 1216 277 282 14 0 chr15 82798085 82798156 -20696818 + L2a LINE L2 3339 3410 -16 4 1216 391 317 35 86 chr15 82798183 82798380 -20696594 + B3A SINE B2 2 188 -10 4 1216 279 235 0 81 chr15 82798833 82798907 -20696067 - MIRc SINE MIR -11 257 190 4 1216 344 259 24 57 chr15 82800455 82800578 -20694396 + L1MB5 LINE L1 5251 5369 -777 4 1216 362 290 0 0 chr15 82800578 82800638 -20694336 + ID_B1 SINE B4 28 157 -67 4 1216 266 243 54 0 chr15 82800638 82800712 -20694262 + B1_Mur4 SINE Alu 3 80 -70 4 1216 548 247 18 96 chr15 82800712 82800878 -20694096 + RSINE1 SINE B4 7 159 -6 4 1216 287 78 20 0 chr15 82800878 82800929 -20694045 + (GA)n Simple_repeat Simple_repeat 1 52 0 4 1216 330 220 12 35 chr15 82800976 82801061 -20693913 + ID_B1 SINE B4 142 224 0 4 1216 457 281 94 6 chr15 82801066 82801246 -20693728 + L1MB5 LINE L1 5389 5581 -608 4 1216 411 165 233 12 chr15 82801295 82801381 -20693593 + PB1D9 SINE Alu 1 105 -15 4 1216 211 320 128 0 chr15 82801402 82801480 -20693494 + B4A SINE B4 36 123 -169 4 1216 345 253 38 0 chr15 82801642 82801721 -20693253 + B4A SINE B4 209 290 -2 4 1216 197 224 17 0 chr15 82801730 82801788 -20693186 + GA-rich Low_complexity Low_complexity 4 62 0 4 1216 418 306 99 103 chr15 82801821 82802163 -20692811 + L1MB5 LINE L1 5704 6048 -126 4 1216 1254 41 0 0 chr15 82802163 82802308 -20692666 + B1_Mm SINE Alu 2 146 -1 4 1216 418 306 99 103 chr15 82802308 82802381 -20692593 + L1MB5 LINE L1 6049 6117 -57 4 1216 405 0 0 0 chr15 82802381 82802426 -20692548 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1216 381 214 23 23 chr15 82802439 82802525 -20692449 + PB1D10 SINE Alu 1 86 -31 4 1216 213 39 0 0 chr15 82803789 82803815 -20691159 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 1216 1138 51 14 0 chr15 82803818 82803956 -20691018 - B1_Mus2 SINE Alu -6 141 2 4 1216 267 31 0 0 chr15 82804092 82804124 -20690850 + (TC)n Simple_repeat Simple_repeat 2 33 0 4 1216 510 231 74 0 chr15 82804124 82804232 -20690742 - B1_Mur1 SINE Alu -12 137 22 4 1216 982 282 5 0 chr15 82804261 82804477 -20690497 - ID_B1 SINE B4 -4 220 4 4 1216 525 294 116 31 chr15 82805245 82805599 -20689375 + L2a LINE L2 2917 3300 -126 4 1216 270 176 0 0 chr15 82805622 82805673 -20689301 + CT-rich Low_complexity Low_complexity 5 55 0 4 1216 190 333 148 16 chr15 82805673 82805795 -20689179 + L2a LINE L2 3289 3426 0 4 1216 341 183 2 23 chr15 82805805 82805886 -20689088 + B1_Mur3 SINE Alu 1 77 -218 4 1216 381 22 0 0 chr15 82806616 82806662 -20688312 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1216 359 324 80 20 chr15 82807152 82807303 -20687671 - MIRb SINE MIR -41 227 68 4 1216 216 0 0 0 chr15 82807416 82807440 -20687534 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 4 1216 293 397 61 23 chr15 82807785 82807999 -20686975 + B4A SINE B4 2 223 -69 4 1216 209 355 139 9 chr15 82808204 82808312 -20686662 + MIRb SINE MIR 31 152 -116 4 1216 1019 234 10 0 chr15 82808342 82808547 -20686427 + ID_B1 SINE B4 8 214 -10 4 1216 331 355 0 24 chr15 82808434 82808561 -20686413 - YREP_Mm Unknown Unknown -1516 296 173 4 1216 281 327 0 0 chr15 82808562 82808643 -20686331 + ID4 SINE ID 12 92 -60 4 1216 475 310 0 25 chr15 82808672 82808791 -20686183 + RSINE1 SINE B4 21 136 -29 4 1216 243 88 0 0 chr15 82808813 82808847 -20686127 + (TAA)n Simple_repeat Simple_repeat 3 36 0 4 1216 231 323 43 0 chr15 82809350 82809443 -20685531 - MIRb SINE MIR -69 199 103 4 1216 203 360 17 59 chr15 82810154 82810272 -20684702 + MIRc SINE MIR 23 135 -133 4 1216 197 254 75 0 chr15 82810529 82810596 -20684378 - MIRc SINE MIR -93 175 104 4 1216 746 244 6 79 chr15 82811004 82811182 -20683792 + RSINE1 SINE B4 1 165 0 4 1216 922 166 14 0 chr15 82811227 82811372 -20683602 - B1_Mur4 SINE Alu -1 149 3 4 1216 292 313 104 91 chr15 82812121 82812320 -20682654 - MIRc SINE MIR -67 201 3 4 1216 270 0 0 0 chr15 82813899 82813929 -20681045 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1216 244 231 85 85 chr15 82814552 82814670 -20680304 - MIR3 SINE MIR -46 162 45 4 1216 474 285 70 41 chr15 82814659 82814871 -20680103 - MIRc SINE MIR -28 234 26 4 1216 597 209 22 7 chr15 82815500 82815635 -20679339 + B1_Mus1 SINE Alu 12 148 0 4 1216 254 128 0 0 chr15 82815635 82815682 -20679292 + B1_Mus2 SINE Alu 100 146 -1 4 1216 182 156 0 59 chr15 82816147 82816215 -20678759 + (TA)n Simple_repeat Simple_repeat 2 65 0 4 1216 238 317 192 5 chr15 82816305 82816492 -20678482 + L2b LINE L2 3131 3352 -23 4 1216 664 235 12 36 chr15 82816517 82816685 -20678289 + RSINE1 SINE B4 2 165 0 4 1216 237 234 0 0 chr15 82816685 82816749 -20678225 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 1216 717 233 0 8 chr15 82816761 82816895 -20678079 - B1_Mur2 SINE Alu -15 134 2 4 1216 193 253 177 10 chr15 82817379 82817475 -20677499 + MIR SINE MIR 37 148 -114 4 1216 225 0 0 0 chr15 82818469 82818494 -20676480 + (TGG)n Simple_repeat Simple_repeat 2 26 0 4 1216 254 340 107 38 chr15 82818594 82818753 -20676221 + L2c LINE L2 3218 3387 0 4 1216 521 240 23 8 chr15 82819455 82819585 -20675389 - MLT1C LTR MaLR -270 197 66 4 1216 356 326 133 24 chr15 82820978 82821226 -20673748 - MLT1D LTR MaLR -4 501 227 4 1216 247 354 53 8 chr15 82821380 82821511 -20673463 + MIR SINE MIR 8 144 -118 4 1216 276 374 0 31 chr15 82821784 82821905 -20673069 - L1MB7 LINE L1 -15 6169 6050 4 1216 198 0 0 0 chr15 82821914 82821936 -20673038 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 4 1216 1044 58 57 7 chr15 82821936 82822066 -20672908 - B1_Mus1 SINE Alu -13 135 1 4 1216 276 374 0 31 chr15 82822066 82822107 -20672867 - L1MB7 LINE L1 -135 6049 6012 4 1216 756 242 121 0 chr15 82822388 82822586 -20672388 - ID_B1 SINE B4 -2 222 1 4 1216 183 162 0 0 chr15 82823328 82823365 -20671609 + A-rich Low_complexity Low_complexity 1 37 0 4 1216 691 232 45 201 chr15 82823787 82823894 -20671080 - ID_B1 SINE B4 0 224 158 4 1216 481 304 30 54 chr15 82823894 82824061 -20670913 - RSINE1 SINE B4 0 165 3 4 1216 691 232 45 201 chr15 82824061 82824217 -20670757 - ID_B1 SINE B4 -67 157 2 4 1216 633 27 0 0 chr15 82825044 82825119 -20669855 + (TC)n Simple_repeat Simple_repeat 2 76 0 4 1216 297 0 0 0 chr15 82825120 82825153 -20669821 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1216 180 0 0 0 chr15 82825153 82825172 -20669802 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 1216 1319 199 26 29 chr15 82827151 82827461 -20667513 - Lx5 LINE L1 0 7050 6742 4 1216 369 0 0 0 chr15 82827484 82827525 -20667449 + (TC)n Simple_repeat Simple_repeat 2 42 0 4 1216 403 339 51 20 chr15 82828128 82828324 -20666650 - L2 LINE L2 -479 2940 2739 4 1216 198 315 0 0 chr15 82829924 82829978 -20664996 - L2c LINE L2 -305 3082 3029 4 1216 218 250 0 0 chr15 82830229 82830269 -20664705 + polypurine Low_complexity Low_complexity 1 40 0 4 1216 461 182 10 142 chr15 82830305 82830434 -20664540 - B1F SINE Alu -6 111 1 4 1216 309 51 0 0 chr15 82830791 82830830 -20664144 + (TTAA)n Simple_repeat Simple_repeat 4 42 0 4 1216 249 181 67 40 chr15 82831292 82831367 -20663607 - MIRc SINE MIR -99 169 93 4 1216 580 368 56 4 chr15 82832905 82833137 -20661837 + MIRb SINE MIR 21 264 -4 4 1216 1015 128 204 11 chr15 82834476 82834657 -20660317 + B3 SINE B2 1 216 0 4 1216 323 100 12 70 chr15 82834971 82835057 -20659917 + (CTATA)n Simple_repeat Simple_repeat 2 82 0 4 1216 652 224 12 0 chr15 82835223 82835393 -20659581 + GA-rich Low_complexity Low_complexity 2 173 0 4 1216 1138 68 0 33 chr15 82835393 82835545 -20659429 + B1_Mm SINE Alu 1 147 0 4 1216 396 0 0 0 chr15 82835547 82835591 -20659383 + (GAAA)n Simple_repeat Simple_repeat 1 44 0 4 1216 1074 107 6 11 chr15 82835593 82835772 -20659202 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 4 1216 2544 86 3 3 chr15 82835916 82836243 -20658731 + ORR1A2 LTR MaLR 1 327 0 5 1216 2012 119 116 8 chr15 82836569 82836932 -20658042 + MTC LTR MaLR 3 404 -17 5 1216 388 345 125 39 chr15 82837117 82837428 -20657546 - L2 LINE L2 -1067 2352 2015 5 18 513 293 54 168 chr15 82837493 82837809 -20657165 + B4A SINE B4 7 286 -6 5 1217 27 29 0 0 chr15 82837839 82837873 -20657101 + AT_rich Low_complexity Low_complexity 1 34 0 5 1217 347 377 31 35 chr15 82838259 82838487 -20656487 + L1M5 LINE L1 2484 2710 -3436 5 1217 290 338 26 39 chr15 82838586 82838740 -20656234 + RSINE1 SINE B4 3 154 -11 5 1217 715 201 231 23 chr15 82838796 82838969 -20656005 - B3 SINE B2 -6 210 2 5 1217 234 297 30 24 chr15 82838987 82839050 -20655924 + ORR1B1-int LTR MaLR 585 648 -861 5 1217 957 94 7 0 chr15 82839050 82839188 -20655786 + B1_Mus2 SINE Alu 1 139 -8 5 1217 280 242 135 60 chr15 82839260 82839277 -20655697 + PB1 SINE Alu 1 43 -84 5 1217 356 225 0 0 chr15 82839277 82839348 -20655626 + ID_B1 SINE B4 99 169 -55 5 1217 280 242 135 60 chr15 82839348 82839377 -20655597 + PB1 SINE Alu 44 125 -2 5 1217 215 341 0 79 chr15 82839386 82839475 -20655499 + ID4 SINE ID 2 83 0 5 1217 618 188 78 0 chr15 82840407 82840535 -20654439 + B1_Mus2 SINE Alu 10 147 0 5 1217 304 155 30 30 chr15 82840549 82840682 -20654292 + (CAGA)n Simple_repeat Simple_repeat 4 136 0 5 1217 183 273 0 0 chr15 82840697 82840741 -20654233 - MIRc SINE MIR -111 157 114 5 1217 189 292 125 0 chr15 82842079 82842151 -20652823 - MIRb SINE MIR -139 129 49 5 1217 216 48 47 23 chr15 82842799 82842842 -20652132 + (GGAGA)n Simple_repeat Simple_repeat 3 46 0 5 1217 214 211 0 0 chr15 82843457 82843509 -20651465 + L2b LINE L2 3071 3122 -253 5 1217 190 333 33 44 chr15 82844389 82844480 -20650494 + L2b LINE L2 3286 3375 0 5 1217 264 277 36 0 chr15 82844523 82844606 -20650368 - L2b LINE L2 -5 3370 3285 5 1217 276 339 64 0 chr15 82844739 82844848 -20650126 + MIRc SINE MIR 58 176 -92 5 1217 811 120 105 0 chr15 82844999 82845132 -20649842 - B1_Mus2 SINE Alu 0 147 1 5 1217 1646 37 5 0 chr15 82846172 82846363 -20648611 + B2_Mm1a SINE B2 2 193 0 5 1217 2180 106 48 3 chr15 82848524 82848836 -20646138 + ORR1A3 LTR MaLR 1 326 0 5 1217 967 198 0 6 chr15 82850386 82850559 -20644415 + B3 SINE B2 1 172 -44 5 1217 588 109 0 21 chr15 82850521 82850615 -20644359 + B1_Mur4 SINE Alu 59 150 0 5 1217 180 0 0 0 chr15 82850615 82850635 -20644339 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1217 471 78 0 0 chr15 82850633 82850697 -20644277 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 5 1217 571 248 8 0 chr15 82850699 82850820 -20644154 + RSINE1 SINE B4 16 137 -28 5 1217 1356 78 0 0 chr15 82850825 82851124 -20643850 + (CA)n Simple_repeat Simple_repeat 1 299 0 5 1217 304 167 10 10 chr15 82851479 82851576 -20643398 + (TTTG)n Simple_repeat Simple_repeat 1 97 0 5 1217 704 138 171 0 chr15 82851588 82851711 -20643263 - B1_Mus1 SINE Alu 0 148 5 5 1217 1122 156 131 0 chr15 82852710 82852909 -20642065 + URR1B DNA MER1_type 1 225 0 5 1217 471 324 39 28 chr15 82853095 82853276 -20641698 + MIRb SINE MIR 3 185 -83 5 1217 2188 124 14 38 chr15 82853552 82853972 -20641002 + RMER17C LTR ERVK 1 410 0 5 1217 189 94 0 0 chr15 82854392 82854424 -20640550 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 1217 1312 20 0 0 chr15 82854426 82854573 -20640401 - B1_Mm SINE Alu 0 147 1 5 1217 302 326 39 58 chr15 82854950 82855106 -20639868 + B4 SINE B4 70 222 -70 5 1217 711 129 0 46 chr15 82854978 82855108 -20639866 + B1_Mur3 SINE Alu 9 132 -17 5 1217 617 58 0 11 chr15 82855122 82855209 -20639765 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 5 1217 893 245 9 19 chr15 82857164 82857376 -20637598 + ID_B1 SINE B4 1 210 -14 5 1217 531 126 0 0 chr15 82859205 82859300 -20635674 + (CA)n Simple_repeat Simple_repeat 1 95 0 5 1217 602 299 33 29 chr15 82859483 82859693 -20635281 - MER58B DNA MER1_type -130 211 1 5 1217 284 333 43 21 chr15 82859693 82859834 -20635140 + L1ME3B LINE L1 5802 5945 -295 5 1217 450 0 0 0 chr15 82860029 82860079 -20634895 + (TAAAA)n Simple_repeat Simple_repeat 2 51 0 5 1217 243 287 58 7 chr15 82860117 82860254 -20634720 + RMER17D LTR ERVK 385 528 -361 5 1217 392 298 9 9 chr15 82861071 82861176 -20633798 + B1F SINE Alu 27 131 -18 5 1217 489 124 32 16 chr15 82861215 82861338 -20633636 + (CAGAGA)n Simple_repeat Simple_repeat 2 126 0 5 1217 288 0 0 0 chr15 82861540 82861572 -20633402 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1217 485 269 0 0 chr15 82861766 82861874 -20633100 - PB1D7 SINE Alu -7 113 6 5 1217 212 393 48 7 chr15 82862101 82862247 -20632727 + MIRm SINE MIR 9 160 -116 5 1217 378 333 56 73 chr15 82862356 82862534 -20632440 + B4A SINE B4 1 175 -117 5 1217 245 232 0 14 chr15 82862546 82862616 -20632358 + (CAGA)n Simple_repeat Simple_repeat 3 71 0 5 1217 252 289 12 24 chr15 82862629 82862714 -20632260 + RSINE1 SINE B4 82 165 0 5 1217 513 58 0 0 chr15 82864300 82864369 -20630605 + (TCC)n Simple_repeat Simple_repeat 3 71 0 5 1217 237 33 0 0 chr15 82865892 82865922 -20629052 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1217 290 285 10 28 chr15 82866278 82866388 -20628586 - MIR SINE MIR -61 207 97 5 1217 777 214 117 19 chr15 82866406 82866611 -20628363 - URR1B DNA MER1_type 0 225 1 5 1217 1397 89 16 0 chr15 82866897 82867087 -20627887 - B2_Mm1t SINE B2 0 193 1 5 1217 317 248 141 0 chr15 82867751 82867872 -20627102 - MIR SINE MIR -13 255 118 5 1217 298 271 0 0 chr15 82868279 82868349 -20626625 - MamRep1161 DNA TcMar -103 854 785 5 1217 423 0 0 0 chr15 82868812 82868859 -20626115 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1217 385 187 0 171 chr15 82868928 82869015 -20625959 + ID_B1 SINE B4 79 156 -68 5 1217 261 0 0 0 chr15 82869015 82869044 -20625930 + (TGG)n Simple_repeat Simple_repeat 3 31 0 5 1217 385 181 0 211 chr15 82869044 82869111 -20625863 + ID_B1 SINE B4 157 198 -26 5 1217 578 127 78 10 chr15 82869046 82869149 -20625825 + B1_Mur3 SINE Alu 19 128 -21 5 1217 200 260 20 0 chr15 82869563 82869613 -20625361 + C-rich Low_complexity Low_complexity 5 55 0 5 1217 237 188 32 158 chr15 82869948 82869964 -20625010 + MT2B LTR ERVL 155 237 -364 5 1217 341 228 13 0 chr15 82869964 82870043 -20624931 + B1F2 SINE Alu 3 82 -67 5 1217 375 60 0 0 chr15 82870047 82870097 -20624877 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1217 231 36 0 0 chr15 82870377 82870405 -20624569 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1217 282 292 130 43 chr15 82871069 82871230 -20623744 + B4A SINE B4 4 178 -114 5 1217 736 143 48 0 chr15 82871256 82871382 -20623592 + B1_Mus2 SINE Alu 15 146 -1 5 1217 243 170 0 0 chr15 82871383 82871430 -20623544 + A-rich Low_complexity Low_complexity 1 47 0 5 1217 916 245 34 5 chr15 82871717 82871922 -20623052 - ID_B1 SINE B4 -12 212 2 5 1217 470 321 65 30 chr15 82871964 82872195 -20622779 - Arthur1 DNA Tip100 -484 3463 3225 5 1217 428 303 30 15 chr15 82872206 82872340 -20622634 - Arthur1 DNA Tip100 -3550 397 262 5 1217 727 188 36 14 chr15 82872584 82872724 -20622250 - B1F SINE Alu -5 144 2 5 1217 338 273 136 0 chr15 82874005 82874115 -20620859 + ID_B1 SINE B4 80 204 -20 5 1217 180 0 0 0 chr15 82874115 82874135 -20620839 + (CG)n Simple_repeat Simple_repeat 1 20 0 5 1217 180 0 0 0 chr15 82874135 82874154 -20620820 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 1217 213 288 0 29 chr15 82874159 82874227 -20620747 + GA-rich Low_complexity Low_complexity 4 69 0 5 1217 192 40 0 0 chr15 82875014 82875039 -20619935 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 1217 599 258 120 31 chr15 82875139 82875331 -20619643 + B3 SINE B2 3 211 -5 5 1217 355 267 28 28 chr15 82875703 82875811 -20619163 - PB1D7 SINE Alu -1 119 12 5 1217 1941 155 27 88 chr15 82875831 82876241 -20618733 - RLTR41 LTR ERV1 0 446 62 5 1217 562 233 26 0 chr15 82876363 82876479 -20618495 + B1F SINE Alu 14 132 -17 5 1217 581 185 154 0 chr15 82876841 82876971 -20618003 + B3A SINE B2 2 151 -47 5 1217 2691 148 49 2 chr15 82876979 82877472 -20617502 - RMER20A LTR ERVK 0 516 1 5 1217 220 261 0 0 chr15 82877476 82877522 -20617452 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1217 863 143 64 0 chr15 82877546 82877686 -20617288 + B1_Mur4 SINE Alu 2 150 0 5 1217 419 0 20 0 chr15 82877776 82877827 -20617147 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1217 321 248 78 12 chr15 82877830 82877992 -20616982 - L1ME1 LINE L1 -25 6154 5985 5 1217 198 0 0 0 chr15 82878092 82878114 -20616860 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1217 373 289 10 0 chr15 82878883 82878980 -20615994 - B4A SINE B4 -191 101 4 5 1217 243 243 113 14 chr15 82879297 82879368 -20615606 - B4 SINE B4 -13 279 202 5 1217 342 45 0 0 chr15 82879491 82879535 -20615439 + (TTA)n Simple_repeat Simple_repeat 2 45 0 5 1217 675 163 154 0 chr15 82879540 82879663 -20615311 - B1_Mur1 SINE Alu -7 142 1 5 1217 445 282 192 103 chr15 82879714 82879906 -20615068 - RMER20B LTR ERVK -44 583 324 5 1217 1385 87 0 5 chr15 82879906 82880092 -20614882 + B2_Mm1a SINE B2 1 185 -8 5 1217 445 282 192 103 chr15 82880092 82880220 -20614754 - RMER20B LTR ERVK -304 323 199 5 1217 1136 63 7 0 chr15 82880220 82880363 -20614611 + B1_Mus1 SINE Alu 4 147 -1 5 1217 445 282 192 103 chr15 82880363 82880495 -20614479 - RMER20B LTR ERVK -429 198 90 5 1217 263 312 43 11 chr15 82880609 82880703 -20614271 - B3A SINE B2 -36 162 66 6 1217 363 281 0 0 chr15 82880971 82881053 -20613921 - B3A SINE B2 -115 83 2 6 1217 277 342 149 11 chr15 82881436 82881705 -20613269 + L2 LINE L2 2493 2798 -621 6 1217 250 229 191 10 chr15 82881757 82881859 -20613115 + PB1D10 SINE Alu 1 120 -29 6 1217 240 262 48 36 chr15 82882668 82882751 -20612223 + B1F SINE Alu 16 99 -50 6 1217 405 70 0 0 chr15 82882761 82882818 -20612156 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1217 922 218 9 79 chr15 82883419 82883648 -20611326 - ID_B1 SINE B4 -2 222 10 6 1217 229 288 144 0 chr15 82883752 82883863 -20611111 + MLT1F1 LTR MaLR 433 559 -10 6 1217 1489 33 66 0 chr15 82884720 82884903 -20610071 - B2_Mm2 SINE B2 0 195 1 6 1217 186 43 0 0 chr15 82885254 82885277 -20609697 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1217 1163 58 0 0 chr15 82885277 82885414 -20609560 - B1_Mus2 SINE Alu -9 138 2 6 1217 366 235 12 0 chr15 82885650 82885731 -20609243 - ID_B1 SINE B4 0 224 143 6 1217 23 0 0 0 chr15 82885731 82885754 -20609220 + AT_rich Low_complexity Low_complexity 1 23 0 6 1217 370 197 2 2 chr15 82885783 82885854 -20609120 - RSINE1 SINE B4 -221 71 1 6 1217 333 224 38 67 chr15 82886069 82886174 -20608800 + ID_B1 SINE B4 117 218 -6 6 1217 189 218 0 44 chr15 82886443 82886534 -20608440 + GA-rich Low_complexity Low_complexity 1 87 0 6 1217 456 248 55 47 chr15 82886542 82886669 -20608305 - RSINE1 SINE B4 -36 129 2 6 1217 1100 179 41 5 chr15 82888054 82888250 -20606724 + B3 SINE B2 2 204 -12 6 1217 251 288 115 18 chr15 82888384 82888497 -20606477 - L1MB8 LINE L1 -6 6172 6049 6 1217 900 192 86 0 chr15 82889186 82889384 -20605590 - B3 SINE B2 0 216 2 6 1217 207 0 0 0 chr15 82889394 82889417 -20605557 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1217 267 154 0 0 chr15 82889631 82889696 -20605278 + A-rich Low_complexity Low_complexity 1 65 0 6 1217 312 391 11 11 chr15 82889823 82889999 -20604975 + L1MEd LINE L1 244 419 -5700 6 1217 977 143 0 0 chr15 82890582 82890729 -20604245 + B1_Mus1 SINE Alu 2 148 0 6 1217 216 0 0 0 chr15 82890786 82890810 -20604164 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 6 1217 511 179 162 0 chr15 82890810 82890927 -20604047 - B1_Mur1 SINE Alu -12 137 2 6 1217 343 253 52 10 chr15 82890943 82891039 -20603935 - B1F SINE Alu -5 144 45 6 1217 405 0 0 0 chr15 82891415 82891460 -20603514 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1217 937 141 69 50 chr15 82891488 82891690 -20603284 - RMER1B Other Other -2 1064 859 6 1217 349 121 0 43 chr15 82891690 82891759 -20603215 - B2_Mm1t SINE B2 0 193 128 6 1217 3083 210 49 61 chr15 82891856 82892687 -20602287 - RMER1B Other Other -200 866 46 6 1217 234 0 0 0 chr15 82892792 82892818 -20602156 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 1217 1113 58 0 0 chr15 82892818 82892956 -20602018 - B1_Mus1 SINE Alu -9 139 2 6 1217 1144 75 0 0 chr15 82892981 82893128 -20601846 - B1_Mus1 SINE Alu 0 148 2 6 1217 198 91 0 0 chr15 82893303 82893336 -20601638 + (A)n Simple_repeat Simple_repeat 1 33 0 6 1217 1215 237 41 3 chr15 82893336 82893628 -20601346 + MTEb LTR MaLR 52 354 -25 6 1217 673 191 20 66 chr15 82893650 82893801 -20601173 + ID_B1 SINE B4 81 224 0 6 1217 557 194 24 0 chr15 82893874 82894044 -20600930 + (TG)n Simple_repeat Simple_repeat 1 174 0 6 1217 316 118 0 0 chr15 82894138 82894189 -20600785 - HAL1-3A_ME LINE L1 -831 2027 1977 6 1217 413 194 30 10 chr15 82894189 82894391 -20600583 + (TG)n Simple_repeat Simple_repeat 1 205 0 6 1217 219 128 0 25 chr15 82894439 82894479 -20600495 - ID SINE ID -181 43 5 6 1217 892 65 0 0 chr15 82894657 82894781 -20600193 + B1_Mus1 SINE Alu 1 124 -24 6 1217 944 203 64 5 chr15 82894841 82895044 -20599930 - B3 SINE B2 0 216 2 6 1217 473 259 35 7 chr15 82895183 82895327 -20599647 + B1F SINE Alu 1 148 -1 6 1217 1149 90 12 6 chr15 82895412 82895580 -20599394 - B2_Mm2 SINE B2 -25 170 2 6 1217 615 201 0 0 chr15 82895632 82895766 -20599208 + GA-rich Low_complexity Low_complexity 1 134 0 6 1217 728 187 22 0 chr15 82895768 82895902 -20599072 + B1_Mur4 SINE Alu 1 137 -13 6 1217 249 57 0 0 chr15 82895906 82895941 -20599033 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 6 1217 642 89 0 0 chr15 82895942 82896032 -20598942 + (GGGAA)n Simple_repeat Simple_repeat 3 92 0 6 1217 666 286 38 62 chr15 82896040 82896236 -20598738 + B4 SINE B4 7 202 -90 6 1217 1655 231 50 12 chr15 82896236 82896640 -20598334 + MTD LTR MaLR 1 419 0 6 1217 666 286 38 62 chr15 82896640 82896655 -20598319 + B4 SINE B4 203 212 -80 6 1217 2295 87 9 12 chr15 82896655 82896983 -20597991 + ORR1A2 LTR MaLR 1 327 0 6 1217 666 286 38 62 chr15 82896983 82897061 -20597913 + B4 SINE B4 213 290 -2 6 1217 257 295 14 116 chr15 82897131 82897189 -20597785 - MIR SINE MIR -72 190 144 6 1217 2078 120 130 64 chr15 82897189 82897318 -20597656 - RMER4A LTR ERVK 0 466 349 6 1217 303 49 0 0 chr15 82897318 82897359 -20597615 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 1217 2078 120 130 64 chr15 82897359 82897666 -20597308 - RMER4A LTR ERVK -118 348 1 6 1217 257 295 14 116 chr15 82897666 82897745 -20597229 - MIR SINE MIR -119 143 67 6 1217 577 313 68 80 chr15 82897851 82897892 -20597082 + MTE2a LTR MaLR 18 62 -357 6 1217 1826 141 87 11 chr15 82897892 82898258 -20596716 - ORR1B1 LTR MaLR 0 394 1 6 1217 1252 265 17 38 chr15 82898258 82898616 -20596358 + MTE2a LTR MaLR 58 411 -8 6 1217 1168 62 0 0 chr15 82898620 82898766 -20596208 + B1_Mm SINE Alu 1 146 -1 6 1217 292 331 125 8 chr15 82898798 82898926 -20596048 + B3 SINE B2 9 151 -65 6 1217 311 0 26 0 chr15 82898940 82898979 -20595995 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1217 457 254 159 0 chr15 82898992 82899118 -20595856 - B1F2 SINE Alu 0 149 4 6 1217 1080 105 11 28 chr15 82899356 82899533 -20595441 - B2_Mm2 SINE B2 -20 175 2 6 1217 668 269 63 95 chr15 82899539 82899761 -20595213 - B3A SINE B2 0 216 2 6 1217 328 346 0 7 chr15 82899873 82900010 -20594964 - Lx8 LINE L1 -359 7114 6979 6 1217 424 208 26 0 chr15 82900281 82900358 -20594616 + ID4_ SINE ID 5 83 0 6 1217 427 220 27 9 chr15 82900445 82900555 -20594419 + B1F SINE Alu 35 146 -3 6 1217 318 184 48 0 chr15 82900647 82900772 -20594202 + (CA)n Simple_repeat Simple_repeat 1 131 0 6 1217 615 105 30 15 chr15 82900788 82900923 -20594051 + (CA)n Simple_repeat Simple_repeat 2 138 0 6 1217 430 250 28 37 chr15 82900943 82901051 -20593923 - B1_Mur1 SINE Alu -41 108 2 6 1217 308 262 52 8 chr15 82901116 82901220 -20593754 - PB1D10 SINE Alu -9 111 5 6 1217 218 346 9 38 chr15 82901131 82901236 -20593738 - ID_B1 SINE B4 -53 171 70 6 1217 674 181 73 22 chr15 82901244 82901380 -20593594 + B1_Mur4 SINE Alu 7 149 -1 6 1217 192 179 0 0 chr15 82901380 82901419 -20593555 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 6 1217 759 233 40 6 chr15 82901471 82901682 -20593292 - MTC-int LTR MaLR -402 856 669 6 1217 679 285 101 4 chr15 82901680 82901914 -20593060 - MTD LTR MaLR -148 271 5 6 1217 268 299 11 44 chr15 82901979 82902070 -20592904 + B1F1 SINE Alu 41 128 -21 6 1217 997 229 85 4 chr15 82902093 82902352 -20592622 + B4A SINE B4 2 281 -11 6 1217 427 240 70 31 chr15 82902330 82902459 -20592515 + B3A SINE B2 65 198 0 6 1217 358 316 38 71 chr15 82902486 82902670 -20592304 + L1ME3B LINE L1 5692 5869 -371 6 1217 256 286 71 81 chr15 82902690 82902888 -20592086 + RLTR25B LTR ERVK 314 509 -519 6 1217 932 78 14 21 chr15 82902787 82902930 -20592044 + B1_Mur3 SINE Alu 6 147 -2 6 1217 2859 51 0 3 chr15 82903028 82903401 -20591573 + L1Md_F2 LINE L1 6200 6571 -11 6 1217 1610 21 0 0 chr15 82903422 82903613 -20591361 + B2_Mm1a SINE B2 2 192 -1 6 1217 517 68 0 0 chr15 82903662 82903735 -20591239 + B2_Mm2 SINE B2 1 73 -122 6 1217 29 28 0 0 chr15 82903769 82903805 -20591169 + AT_rich Low_complexity Low_complexity 1 36 0 6 1217 328 204 151 0 chr15 82903881 82903974 -20591000 + ORR1D2 LTR MaLR 9 115 -255 6 1217 493 239 23 70 chr15 82904134 82904305 -20590669 + RSINE1 SINE B4 3 165 0 6 1217 262 282 7 7 chr15 82904327 82904470 -20590504 + (CA)n Simple_repeat Simple_repeat 1 143 0 6 1217 720 319 81 42 chr15 82904596 82904956 -20590018 - LTR16B1 LTR ERVL -102 360 1 6 1217 258 206 16 16 chr15 82905235 82905299 -20589675 + ID_B1 SINE B4 82 145 -79 6 1217 341 315 46 46 chr15 82905302 82905475 -20589499 + B4A SINE B4 2 174 -118 6 1217 286 314 41 25 chr15 82905464 82905585 -20589389 + RSINE1 SINE B4 41 163 -2 6 1217 365 86 0 17 chr15 82905593 82905652 -20589322 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 1217 283 230 40 26 chr15 82905659 82905735 -20589239 + B1F1 SINE Alu 67 143 -6 6 1217 1301 96 11 5 chr15 82905796 82905985 -20588989 + B2_Mm2 SINE B2 1 190 -5 6 1217 590 144 14 113 chr15 82905986 82906112 -20588862 + B1_Mus1 SINE Alu 22 135 -13 6 1217 188 35 35 0 chr15 82906112 82906141 -20588833 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 6 1217 590 144 14 113 chr15 82906141 82906155 -20588819 + B1_Mus1 SINE Alu 136 148 0 6 1217 353 188 50 0 chr15 82906839 82906919 -20588055 + B4A SINE B4 1 84 -208 6 1217 431 248 0 71 chr15 82907296 82907409 -20587565 - B1F2 SINE Alu -43 106 2 6 1217 730 109 8 16 chr15 82907417 82907538 -20587436 - B1_Mus2 SINE Alu 0 147 28 6 1217 614 218 105 6 chr15 82907507 82907678 -20587296 - B3 SINE B2 -28 188 1 6 1217 401 165 262 0 chr15 82907716 82907819 -20587155 + B1F SINE Alu 3 132 -17 6 1217 3899 135 137 32 chr15 82908029 82908833 -20586141 + RMER19B LTR ERVK 1 888 -14 6 1217 1038 96 7 0 chr15 82908833 82908979 -20585995 + B1_Mus2 SINE Alu 1 147 0 7 1217 921 123 20 0 chr15 82909162 82909308 -20585666 - B1_Mur3 SINE Alu 0 149 1 7 1217 198 0 0 0 chr15 82909751 82909773 -20585201 + (T)n Simple_repeat Simple_repeat 1 22 0 7 1217 282 230 51 63 chr15 82909776 82909855 -20585119 - ID4_ SINE ID -2 81 4 7 1217 227 236 175 73 chr15 82909895 82910032 -20584942 - MTEa LTR MaLR -55 324 174 7 1217 574 286 154 52 chr15 82909995 82910320 -20584654 - MER89 LTR ERV1 -63 496 139 7 1217 366 23 0 0 chr15 82910332 82910375 -20584599 + (TC)n Simple_repeat Simple_repeat 1 43 0 7 1217 291 28 0 0 chr15 82910375 82910410 -20584564 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1217 691 290 85 37 chr15 82910432 82910704 -20584270 + B4A SINE B4 3 287 -5 7 1217 858 157 14 0 chr15 82910804 82910944 -20584030 + B1_Mus2 SINE Alu 2 143 -4 7 1217 2954 32 35 0 chr15 82910972 82911343 -20583631 + L1Md_F3 LINE L1 6189 6572 -12 7 1217 271 149 21 0 chr15 82911641 82911688 -20583286 - ID_B1 SINE B4 0 224 177 7 1217 342 0 0 0 chr15 82911783 82911821 -20583153 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 7 1217 374 231 0 0 chr15 82912538 82912616 -20582358 + RSINE1 SINE B4 46 123 -42 7 1217 215 211 0 0 chr15 82912626 82912664 -20582310 + polypurine Low_complexity Low_complexity 4 41 0 7 1217 1161 54 0 0 chr15 82912688 82912835 -20582139 + B1_Mus1 SINE Alu 1 147 -1 7 1217 527 0 16 0 chr15 82912877 82912940 -20582034 + (TG)n Simple_repeat Simple_repeat 2 65 0 7 1217 235 233 0 0 chr15 82912942 82912985 -20581989 - ID4_ SINE ID -40 43 1 7 1217 323 318 26 63 chr15 82912985 82913154 -20581820 + MLT1A LTR MaLR 31 192 -182 7 1217 740 108 9 0 chr15 82913188 82913299 -20581675 + B1_Mus1 SINE Alu 36 147 -1 7 1217 288 266 19 95 chr15 82913299 82913338 -20581636 + RLTR25B LTR ERVK 449 572 -456 7 1217 416 301 75 33 chr15 82913458 82913671 -20581303 - MLT1C LTR MaLR -194 273 52 7 1217 428 285 0 65 chr15 82913747 82913931 -20581043 + C-rich Low_complexity Low_complexity 3 174 0 7 1217 225 267 0 0 chr15 82913987 82914103 -20580871 + C-rich Low_complexity Low_complexity 3 118 0 7 1217 460 176 106 19 chr15 82914588 82914677 -20580297 + B1_Mur1 SINE Alu 18 117 -32 7 1217 192 40 0 0 chr15 82914677 82914702 -20580272 + (CAGAGA)n Simple_repeat Simple_repeat 6 30 0 7 1217 460 176 106 19 chr15 82914702 82914716 -20580258 + B1_Mur1 SINE Alu 118 130 -19 7 1217 258 32 0 0 chr15 82914729 82914760 -20580214 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 1217 512 238 89 8 chr15 82915274 82915397 -20579577 + RSINE1 SINE B4 1 133 -32 7 1217 1103 130 16 16 chr15 82915443 82915631 -20579343 - B2_Mm2 SINE B2 -4 191 4 7 1217 314 256 175 64 chr15 82915652 82915670 -20579304 - B2_Mm1t SINE B2 0 193 170 7 1217 282 29 0 0 chr15 82915670 82915705 -20579269 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1217 591 224 89 8 chr15 82915705 82915857 -20579117 - B3A SINE B2 -24 169 4 7 1217 257 75 0 24 chr15 82916691 82916732 -20578242 + (CTTG)n Simple_repeat Simple_repeat 2 41 0 7 1217 906 134 0 0 chr15 82916732 82916866 -20578108 - B1_Mus2 SINE Alu -9 138 5 7 1217 207 88 0 0 chr15 82916912 82916946 -20578028 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 7 1217 654 302 51 1 chr15 82917230 82917481 -20577493 - MTE2b LTR MaLR -107 272 5 7 1217 645 215 59 0 chr15 82917576 82917600 -20577374 - B1_Mur1 SINE Alu -1 148 125 7 1217 831 116 176 6 chr15 82917600 82917765 -20577209 + B2_Mm1a SINE B2 1 193 0 7 1217 645 215 59 0 chr15 82917765 82917875 -20577099 - B1_Mur1 SINE Alu -25 124 7 7 1217 186 43 0 0 chr15 82917896 82917919 -20577055 + (TTG)n Simple_repeat Simple_repeat 2 24 0 7 1217 938 135 0 0 chr15 82917919 82918060 -20576914 - B1_Mus1 SINE Alu -6 142 2 7 1217 458 226 72 79 chr15 82918739 82918878 -20576096 + B1_Mur2 SINE Alu 1 138 -11 7 1217 486 169 0 0 chr15 82918883 82918972 -20576002 + GA-rich Low_complexity Low_complexity 4 92 0 7 1217 405 298 35 58 chr15 82918997 82919168 -20575806 + B3A SINE B2 3 169 -29 7 1217 249 57 0 0 chr15 82919169 82919204 -20575770 + (CCCCG)n Simple_repeat Simple_repeat 5 39 0 7 1217 26 0 0 0 chr15 82919211 82919237 -20575737 + AT_rich Low_complexity Low_complexity 1 26 0 7 1217 270 0 0 0 chr15 82920817 82920847 -20574127 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 1217 207 0 0 0 chr15 82920913 82920936 -20574038 + (A)n Simple_repeat Simple_repeat 1 23 0 7 1217 203 354 0 0 chr15 82920945 82921010 -20573964 - L2b LINE L2 -308 3067 3003 7 1217 474 250 103 0 chr15 82921022 82921158 -20573816 - L2a LINE L2 -1 3425 3276 7 1217 954 102 15 0 chr15 82921691 82921828 -20573146 - B1_Mus1 SINE Alu -9 139 1 7 1217 180 0 0 0 chr15 82921829 82921849 -20573125 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 7 1217 1104 94 6 0 chr15 82921849 82922009 -20572965 - B2_Mm2 SINE B2 -34 161 1 7 1217 697 262 49 0 chr15 82922180 82922344 -20572630 - ID_B1 SINE B4 -20 204 33 7 1217 2937 169 88 22 chr15 82922422 82922745 -20572229 - RLTR33 LTR ERVK -1 677 328 7 1217 1043 48 14 14 chr15 82922745 82922892 -20572082 - B1_Mus2 SINE Alu 0 147 1 7 1217 2937 169 88 22 chr15 82922892 82923203 -20571771 - RLTR33 LTR ERVK -351 327 1 7 1217 334 68 0 0 chr15 82923484 82923528 -20571446 + B1_Mus1 SINE Alu 1 44 -104 7 1217 5402 135 54 145 chr15 82923576 82924057 -20570917 + MTC-int LTR MaLR 2 394 -864 7 1217 1097 45 0 0 chr15 82924057 82924191 -20570783 + B1_Mus1 SINE Alu 2 135 -13 7 1217 5402 135 54 145 chr15 82924191 82924926 -20570048 + MTC-int LTR MaLR 395 1095 -163 7 1217 1200 41 0 0 chr15 82924926 82925072 -20569902 + B1_Mm SINE Alu 2 147 0 7 1217 5402 135 54 145 chr15 82925072 82925236 -20569738 + MTC-int LTR MaLR 1096 1258 0 7 1217 2008 150 107 31 chr15 82925236 82925627 -20569347 + MTC LTR MaLR 1 421 0 7 1217 259 203 0 169 chr15 82925630 82925707 -20569267 - PB1D10 SINE Alu -33 84 21 7 1217 235 259 74 0 chr15 82925713 82925794 -20569180 + L1MEf LINE L1 874 960 -5240 7 1217 767 264 22 19 chr15 82926047 82926309 -20568665 + ORR1E LTR MaLR 4 251 -116 7 1217 538 255 40 80 chr15 82926341 82926541 -20568433 + ORR1E LTR MaLR 168 359 0 7 1217 517 288 82 52 chr15 82926571 82926765 -20568209 - MTE2b LTR MaLR -165 214 15 7 1217 26 0 0 0 chr15 82926769 82926795 -20568179 + AT_rich Low_complexity Low_complexity 1 26 0 7 1217 621 150 8 24 chr15 82926945 82927082 -20567892 - PB1D9 SINE Alu -7 142 14 7 1217 216 0 0 0 chr15 82927103 82927127 -20567847 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1217 1343 59 16 11 chr15 82927127 82927307 -20567667 - B2_Mm2 SINE B2 -12 183 2 7 1217 352 213 13 0 chr15 82927310 82927385 -20567589 - PB1D10 SINE Alu -4 113 38 7 1217 2121 89 26 0 chr15 82927389 82927702 -20567272 + ORR1A4 LTR MaLR 1 321 -8 7 1217 1183 41 7 0 chr15 82927717 82927863 -20567111 + B1_Mm SINE Alu 1 147 0 7 1217 403 270 83 108 chr15 82927952 82928230 -20566744 - L1MD3 LINE L1 -5 7990 7720 7 1217 701 197 219 0 chr15 82929411 82929589 -20565385 + ID_B1 SINE B4 2 218 -6 7 1217 230 260 88 38 chr15 82930023 82930103 -20564871 - PB1D10 SINE Alu 0 117 34 7 1217 182 304 36 0 chr15 82931089 82931145 -20563829 + MIR SINE MIR 108 165 -97 7 1217 261 0 0 0 chr15 82931160 82931189 -20563785 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 7 1217 392 267 50 41 chr15 82931362 82931483 -20563491 - B1F2 SINE Alu -27 122 1 7 1217 229 340 34 68 chr15 82931517 82931722 -20563252 + Tigger7 DNA MER2_type 2285 2482 -9 7 1217 260 252 148 20 chr15 82931731 82931832 -20563142 - MIR SINE MIR -107 155 42 7 1217 183 339 0 0 chr15 82933904 82933963 -20561011 + MIRc SINE MIR 51 109 -159 7 1217 182 118 29 0 chr15 82934042 82934076 -20560898 + (TTTC)n Simple_repeat Simple_repeat 4 38 0 7 1217 511 278 0 25 chr15 82934084 82934202 -20560772 - PB1D7 SINE Alu -5 115 1 7 1217 232 306 14 108 chr15 82934202 82934237 -20560737 - MT2B2 LTR ERVL -434 150 129 7 1217 237 170 43 0 chr15 82934942 82934989 -20559985 + CT-rich Low_complexity Low_complexity 2 50 0 7 1217 1126 62 7 0 chr15 82935399 82935544 -20559430 - B1_Mm SINE Alu 0 147 2 7 1217 309 201 0 91 chr15 82935707 82935808 -20559166 - ID4_ SINE ID -51 101 8 7 1217 425 288 57 14 chr15 82935824 82935965 -20559009 - B1F SINE Alu -2 147 1 7 1217 1068 269 95 26 chr15 82936588 82936936 -20558038 - MTEa LTR MaLR -3 376 5 7 1217 1687 126 46 13 chr15 82937780 82938086 -20556888 - RMER6A LTR ERVK -13 743 428 7 1217 2427 164 131 29 chr15 82938086 82938712 -20556262 - RMER17B LTR ERVK 0 958 307 7 1217 587 60 0 0 chr15 82938703 82938786 -20556188 + B1_Mur4 SINE Alu 68 150 0 7 1217 401 83 0 16 chr15 82938814 82938875 -20556099 - RMER6A LTR ERVK -641 115 56 7 1217 328 190 0 0 chr15 82938903 82938961 -20556013 - RMER6A LTR ERVK -403 58 1 7 1217 3093 50 2 8 chr15 82939334 82939736 -20555238 - MTB LTR MaLR 0 400 1 7 1217 327 85 0 0 chr15 82940289 82940336 -20554638 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 7 1217 1060 63 0 0 chr15 82940338 82940480 -20554494 - B1_Mus2 SINE Alu 0 147 6 7 1217 255 244 46 0 chr15 82940378 82940482 -20554492 - ORR1B1-int LTR MaLR -755 754 648 7 1217 231 36 0 0 chr15 82940482 82940510 -20554464 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 7 1217 255 244 46 0 chr15 82940510 82940536 -20554438 - ORR1B1-int LTR MaLR -862 647 619 7 1217 759 227 26 0 chr15 82940535 82940689 -20554285 - B3 SINE B2 -52 164 7 7 1217 671 155 85 0 chr15 82940757 82940886 -20554088 + B1_Mur1 SINE Alu 3 142 -7 7 1217 663 116 118 52 chr15 82940930 82941066 -20553908 + B1_Mur4 SINE Alu 6 150 0 7 1217 394 202 13 0 chr15 82941106 82941185 -20553789 + ID4_ SINE ID 3 82 -1 7 1217 460 230 19 0 chr15 82941209 82941316 -20553658 + B1_Mur3 SINE Alu 3 120 0 7 1217 287 93 0 0 chr15 82941381 82941424 -20553550 + B2_Mm2 SINE B2 1 43 -152 8 1217 709 179 64 0 chr15 82942157 82942297 -20552677 + B1_Mur1 SINE Alu 1 149 0 8 1217 552 111 0 0 chr15 82942300 82942390 -20552584 + (GGAA)n Simple_repeat Simple_repeat 2 91 0 8 1217 753 69 244 4 chr15 82942779 82942931 -20552043 + B2_Mm2 SINE B2 1 181 -12 8 1217 529 274 82 130 chr15 82943774 82944067 -20550907 - B4 SINE B4 -12 280 2 8 1217 266 266 296 8 chr15 82945211 82945336 -20549638 - 7SK RNA RNA -170 161 1 8 1217 579 247 55 59 chr15 82948674 82948876 -20546098 + B3 SINE B2 16 216 0 8 1217 207 69 0 0 chr15 82950828 82950857 -20544117 + (CCA)n Simple_repeat Simple_repeat 3 31 0 8 1217 1055 177 0 16 chr15 82950900 82951089 -20543885 - B2_Mm2 SINE B2 -9 186 1 8 1217 378 211 14 0 chr15 82951127 82951198 -20543776 - ID4_ SINE ID -2 81 10 8 1217 360 0 0 0 chr15 82951198 82951238 -20543736 + (TAA)n Simple_repeat Simple_repeat 3 42 0 8 1217 352 220 0 48 chr15 82951248 82951410 -20543564 + B1_Mus2 SINE Alu 4 148 -1 8 1217 652 117 10 46 chr15 82951564 82951699 -20543275 - B1_Mus2 SINE Alu -5 144 16 8 1217 562 245 22 0 chr15 82951687 82951826 -20543148 + ID_B1 SINE B4 79 220 -4 8 1217 247 320 88 0 chr15 82951964 82952089 -20542885 + B1F SINE Alu 1 136 -13 8 1217 373 184 174 0 chr15 82953334 82953432 -20541542 + B3 SINE B2 1 115 -101 8 1217 1088 43 56 21 chr15 82953465 82953608 -20541366 - B1_Mus1 SINE Alu 0 148 1 8 1217 1166 81 0 0 chr15 82953615 82953763 -20541211 - B1_Mus1 SINE Alu 0 148 1 8 1217 1499 64 11 0 chr15 82953772 82953959 -20541015 - B2_Mm1t SINE B2 -4 189 1 8 1217 23 0 0 0 chr15 82953963 82953986 -20540988 + AT_rich Low_complexity Low_complexity 1 23 0 8 1217 387 262 130 9 chr15 82954096 82954204 -20540770 + RSINE1 SINE B4 22 142 -23 8 1217 688 212 0 15 chr15 82954255 82954389 -20540585 - B1_Mur1 SINE Alu -11 138 7 8 1217 1544 199 109 8 chr15 82954499 82954874 -20540100 - MTC LTR MaLR 0 421 9 8 1217 772 262 374 11 chr15 82955135 82955567 -20539407 + MTE-int LTR MaLR 713 1306 -274 8 1217 1286 27 0 0 chr15 82955567 82955714 -20539260 - B1_Mus2 SINE Alu 0 147 1 8 1217 772 268 179 8 chr15 82955714 82955767 -20539207 + MTE-int LTR MaLR 1307 1364 -216 8 1217 1381 83 0 40 chr15 82955776 82955976 -20538998 + B2_Mm1t SINE B2 2 193 0 8 1217 681 222 86 45 chr15 82955985 82956183 -20538791 + B3 SINE B2 1 206 -10 8 1217 587 319 0 6 chr15 82956203 82956361 -20538613 + RSINE1 SINE B4 1 157 -8 8 1217 207 188 0 0 chr15 82957895 82957943 -20537031 + A-rich Low_complexity Low_complexity 1 48 0 8 1217 424 273 71 13 chr15 82958817 82958983 -20535991 - B3A SINE B2 -3 192 1 8 1217 234 340 31 21 chr15 82959789 82959885 -20535089 + PB1D10 SINE Alu 1 97 -20 8 1217 406 186 136 10 chr15 82960495 82960598 -20534376 + Tigger1 DNA MER2_type 308 423 -1995 8 1217 273 238 63 0 chr15 82960602 82960665 -20534309 - B1F SINE Alu -9 140 74 8 1217 420 301 6 134 chr15 82960768 82960925 -20534049 + ID_B1 SINE B4 2 138 -86 8 1217 366 253 22 0 chr15 82960880 82960971 -20534003 + PB1D7 SINE Alu 13 105 -15 8 1217 207 0 0 0 chr15 82960997 82961020 -20533954 + (A)n Simple_repeat Simple_repeat 1 23 0 8 1217 252 206 169 0 chr15 82961180 82961249 -20533725 + B1_Mus1 SINE Alu 12 93 -56 8 1217 345 62 0 0 chr15 82961254 82961302 -20533672 + (GA)n Simple_repeat Simple_repeat 2 49 0 8 1217 273 269 89 7 chr15 82961333 82961468 -20533506 + L1M LINE L1 5280 5425 -934 8 1217 251 267 57 38 chr15 82962392 82962497 -20532477 - MER81 DNA AcHobo -2 112 6 8 1217 460 165 41 10 chr15 82962723 82962854 -20532120 + B1_Mur4 SINE Alu 5 141 -9 8 1217 212 0 0 35 chr15 82962854 82962883 -20532091 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 8 1217 744 198 20 11 chr15 82964395 82964582 -20530392 - B3 SINE B2 -3 192 1 8 1217 233 115 57 19 chr15 82966127 82966180 -20528794 - PB1D10 SINE Alu -26 91 37 8 1217 908 60 191 7 chr15 82967055 82967207 -20527767 + B2_Mm2 SINE B2 8 187 -8 8 1217 247 263 0 50 chr15 82967208 82967288 -20527686 - PB1D10 SINE Alu -2 115 40 8 1217 211 234 327 0 chr15 82967288 82967315 -20527659 - ID_B1 SINE B4 -2 222 81 8 1217 474 267 61 8 chr15 82967321 82967453 -20527521 - B1F SINE Alu -1 148 10 8 1217 491 299 0 0 chr15 82967477 82967594 -20527380 - PB1D9 SINE Alu -2 118 2 8 1217 782 128 17 0 chr15 82967618 82967735 -20527239 - PB1D9 SINE Alu 0 120 2 8 1217 218 343 59 15 chr15 82968192 82968328 -20526646 + MIRc SINE MIR 18 159 -109 8 1218 249 289 35 24 chr15 82969376 82969454 -20525520 + PB1D10 SINE Alu 24 104 -13 8 1218 303 28 0 0 chr15 82969454 82969490 -20525484 + (TAGA)n Simple_repeat Simple_repeat 3 38 0 8 1218 1592 122 101 0 chr15 82969552 82969830 -20525144 + ORR1A4 LTR MaLR 24 329 0 8 1218 355 316 30 0 chr15 82969830 82969954 -20525020 + B3 SINE B2 82 209 -7 8 1218 1252 54 0 0 chr15 82970028 82970175 -20524799 - B1_Mus1 SINE Alu 0 148 2 8 1218 557 281 20 54 chr15 82970215 82970418 -20524556 + B3A SINE B2 3 198 0 8 1218 1290 34 0 0 chr15 82970428 82970575 -20524399 + B1_Mus2 SINE Alu 1 147 0 8 1218 288 0 0 0 chr15 82970575 82970607 -20524367 + (A)n Simple_repeat Simple_repeat 1 32 0 8 1218 678 178 139 0 chr15 82970616 82970745 -20524229 + B1_Mus1 SINE Alu 1 147 -1 8 1218 531 0 0 0 chr15 82970774 82970833 -20524141 + (GA)n Simple_repeat Simple_repeat 2 60 0 8 1218 305 247 23 58 chr15 82971770 82971856 -20523118 + ID4_ SINE ID 1 83 0 8 1218 461 269 53 15 chr15 82972568 82972700 -20522274 + B3A SINE B2 1 137 -61 8 1218 776 145 23 0 chr15 82972721 82972852 -20522122 - B1_Mur4 SINE Alu -7 143 10 8 1218 351 222 16 129 chr15 82972747 82972871 -20522103 - MT2B LTR ERVL -337 264 155 8 1218 570 185 110 26 chr15 82973868 82974023 -20520951 - B2_Mm2 SINE B2 -20 175 8 8 1218 1172 62 7 0 chr15 82974242 82974387 -20520587 + B1_Mm SINE Alu 2 147 0 8 1218 285 29 0 0 chr15 82974387 82974421 -20520553 + (A)n Simple_repeat Simple_repeat 1 34 0 8 1218 357 321 204 0 chr15 82974528 82974665 -20520309 - RSINE1 SINE B4 0 165 1 8 1218 516 239 150 24 chr15 82974702 82974869 -20520105 - B3 SINE B2 -1 215 28 8 1218 986 92 0 0 chr15 82974881 82975022 -20519952 - B1_Mus1 SINE Alu 0 148 8 8 1218 386 265 85 85 chr15 82975022 82975037 -20519937 - B4A SINE B4 -59 180 69 8 1218 324 214 129 5 chr15 82975521 82975629 -20519345 - PB1D10 SINE Alu -1 119 1 8 1218 1148 59 0 0 chr15 82975652 82975788 -20519186 + B1_Mus1 SINE Alu 2 137 -11 8 1218 735 195 8 0 chr15 82975884 82976012 -20518962 - B1_Mur3 SINE Alu -19 130 2 8 1218 485 223 77 28 chr15 82977299 82977442 -20517532 + URR1B DNA MER1_type 2 151 -74 8 1218 1318 92 38 0 chr15 82977447 82977632 -20517342 + B2_Mm2 SINE B2 3 194 -1 8 1218 1264 48 0 0 chr15 82978035 82978182 -20516792 - B1_Mus1 SINE Alu -1 147 1 8 1218 1308 69 40 11 chr15 82978402 82978578 -20516396 - B2_Mm2 SINE B2 -14 181 1 8 1218 253 182 90 15 chr15 82978818 82978885 -20516089 + MIR SINE MIR 85 156 -106 8 1218 385 174 98 39 chr15 82978900 82979002 -20515972 + PB1 SINE Alu 20 127 0 8 1218 405 309 0 47 chr15 82979007 82979136 -20515838 + ID_B1 SINE B4 102 224 0 8 1218 641 172 178 29 chr15 82980643 82980775 -20514199 + B3 SINE B2 16 163 -53 8 1218 365 20 41 0 chr15 82980775 82980824 -20514150 + (CATA)n Simple_repeat Simple_repeat 1 51 0 8 1218 641 172 178 29 chr15 82980824 82980865 -20514109 + B3 SINE B2 164 215 -1 8 1218 1613 47 0 0 chr15 82980933 82981126 -20513848 + B2_Mm1a SINE B2 1 193 0 8 1218 3060 82 156 0 chr15 82981763 82982251 -20512723 + MT2B2 LTR ERVL 1 564 -20 8 1218 2040 141 46 62 chr15 82982507 82982550 -20512424 + MTC LTR MaLR 3 38 -383 8 1218 4883 48 10 2 chr15 82982550 82983132 -20511842 + LTRIS_Mus LTR ERV1 1 587 0 8 1218 2040 141 46 62 chr15 82983132 82983504 -20511470 + MTC LTR MaLR 39 411 -10 8 1218 233 119 24 0 chr15 82983854 82983896 -20511078 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 1218 972 48 54 0 chr15 82984477 82984645 -20510329 + (TC)n Simple_repeat Simple_repeat 1 177 0 8 1218 279 54 0 0 chr15 82984652 82984689 -20510285 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 1218 239 252 45 75 chr15 82984782 82984915 -20510059 - L1M2b LINE L1 -5960 1249 1121 8 1218 348 301 34 17 chr15 82985192 82985368 -20509606 + (CCCA)n Simple_repeat Simple_repeat 1 179 0 8 1218 514 272 30 12 chr15 82985306 82985635 -20509339 + (CCTG)n Simple_repeat Simple_repeat 1 335 0 8 1218 277 167 118 53 chr15 82986166 82986242 -20508732 + B1F SINE Alu 1 81 -68 8 1218 1385 77 66 0 chr15 82986854 82987037 -20507937 + B2_Mm2 SINE B2 1 195 0 8 1218 330 246 248 78 chr15 82987041 82987182 -20507792 + RSINE1 SINE B4 1 165 0 8 1218 291 273 26 0 chr15 82987334 82987411 -20507563 + L4 LINE RTE 1758 1836 -193 8 1218 404 221 183 27 chr15 82988154 82988340 -20506634 + RMER15 LTR ERVL 275 489 -86 8 1218 691 264 23 59 chr15 82988528 82988749 -20506225 - ID_B1 SINE B4 0 224 12 8 1218 210 277 159 9 chr15 82989074 82989187 -20505787 + MIRb SINE MIR 9 138 -130 9 1218 435 227 64 0 chr15 82989589 82989699 -20505275 + B1F SINE Alu 1 117 -32 9 1218 1499 40 17 0 chr15 82989708 82989884 -20505090 + B2_Mm2 SINE B2 2 180 -15 9 1218 264 77 0 0 chr15 82989902 82989941 -20505033 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 9 1218 195 42 0 0 chr15 82992070 82992094 -20502880 + (CCCCCA)n Simple_repeat Simple_repeat 6 29 0 9 1218 1192 82 0 0 chr15 82993967 82994114 -20500860 + B1_Mus2 SINE Alu 1 147 0 9 1218 234 164 0 35 chr15 82994114 82994171 -20500803 + A-rich Low_complexity Low_complexity 3 57 0 9 1218 420 183 198 9 chr15 82994508 82994600 -20500374 + B1_Mus2 SINE Alu 10 116 -31 9 1218 1057 96 24 0 chr15 82994600 82994767 -20500207 + (GAGAA)n Simple_repeat Simple_repeat 4 174 0 9 1218 420 183 198 9 chr15 82994767 82994790 -20500184 + B1_Mus2 SINE Alu 117 146 -1 9 1218 181 218 47 82 chr15 82995372 82995457 -20499517 - MIR3 SINE MIR -112 96 15 9 1218 240 59 0 0 chr15 82996037 82996071 -20498903 + (TGGG)n Simple_repeat Simple_repeat 2 35 0 9 1218 378 283 160 21 chr15 82996150 82996338 -20498636 + RMER15 LTR ERVL 349 562 -13 9 1218 296 186 96 41 chr15 82996868 82996941 -20498033 - ID_B1 SINE B4 -64 160 84 9 1218 231 315 174 41 chr15 82997309 82997481 -20497493 + MTEb LTR MaLR 149 343 -36 9 1218 220 323 65 0 chr15 82998342 82998435 -20496539 - MIR3 SINE MIR -102 106 8 9 1218 251 333 58 32 chr15 82998600 82998789 -20496185 + L2b LINE L2 2974 3167 -208 9 1218 1148 45 0 0 chr15 82999135 82999269 -20495705 - B1_Mus1 SINE Alu -10 138 5 9 1218 303 28 0 0 chr15 83000149 83000185 -20494789 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1218 842 130 87 0 chr15 83001608 83001746 -20493228 + B1_Mur4 SINE Alu 1 150 0 2 1218 1586 207 22 35 chr15 83003574 83003944 -20491030 - ORR1D2 LTR MaLR -5 365 1 3 1218 504 248 72 43 chr15 83003965 83004104 -20490870 + ID_B1 SINE B4 81 223 -1 4 1218 459 216 11 11 chr15 83004201 83004290 -20490684 + PB1D10 SINE Alu 21 109 -8 5 1218 313 250 0 84 chr15 83004347 83004430 -20490544 - B4A SINE B4 -214 78 3 6 1218 469 155 184 10 chr15 83004899 83004997 -20489977 + B3A SINE B2 3 117 -81 7 1218 732 149 120 7 chr15 83005002 83005144 -20489830 + URR1B DNA MER1_type 68 225 0 8 1218 410 240 10 8 chr15 83005368 83005489 -20489485 - B1F2 SINE Alu -3 117 1 9 1218 283 309 38 38 chr15 83005489 83005523 -20489451 - B4A SINE B4 -202 90 57 1 1218 1421 85 0 21 chr15 83005975 83006168 -20488806 - B2_Mm2 SINE B2 -5 190 2 1 1218 1374 69 27 0 chr15 83006181 83006369 -20488605 - B2_Mm1a SINE B2 0 193 1 1 1218 591 53 0 0 chr15 83006373 83006448 -20488526 + (TTCTC)n Simple_repeat Simple_repeat 2 76 0 1 1218 474 219 8 50 chr15 83006488 83006608 -20488366 - B1F SINE Alu -17 132 18 1 1218 261 0 0 0 chr15 83007109 83007138 -20487836 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1218 505 305 13 0 chr15 83007146 83007297 -20487677 - RSINE1 SINE B4 -9 156 4 1 1218 932 158 20 0 chr15 83007580 83007726 -20487248 - B1_Mur4 SINE Alu 0 150 2 1 1218 617 277 8 0 chr15 83008124 83008254 -20486720 + ID_B1 SINE B4 82 212 -12 1 1218 315 0 0 0 chr15 83008261 83008296 -20486678 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1218 1367 95 26 0 chr15 83008629 83008818 -20486156 + B2_Mm2 SINE B2 1 194 -1 2 1218 245 379 35 3 chr15 83009131 83009249 -20485725 - MIR SINE MIR -110 166 47 2 1218 269 233 33 0 chr15 83009426 83009486 -20485488 + MIR SINE MIR 87 148 -60 2 1218 955 83 0 0 chr15 83009552 83009673 -20485301 + B2_Mm2 SINE B2 3 123 -72 2 1218 27 0 0 0 chr15 83009673 83009700 -20485274 + AT_rich Low_complexity Low_complexity 1 27 0 2 1218 270 73 49 0 chr15 83009736 83009777 -20485197 + B2_Mm2 SINE B2 1 43 -152 2 1218 1185 62 7 0 chr15 83009777 83009922 -20485052 + B1_Mus2 SINE Alu 1 146 -1 2 1218 279 0 0 0 chr15 83009946 83009977 -20484997 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1218 853 174 20 0 chr15 83009977 83010126 -20484848 + B3 SINE B2 27 178 -38 2 1218 256 286 143 83 chr15 83010159 83010376 -20484598 - RMER2 LTR ERV1 -4 563 334 2 1218 1408 80 43 0 chr15 83010970 83011157 -20483817 + B2_Mm2 SINE B2 1 195 0 3 1218 976 68 113 0 chr15 83011158 83011291 -20483683 + B1_Mus1 SINE Alu 1 148 0 3 1218 993 120 42 0 chr15 83011429 83011571 -20483403 + B1_Mus1 SINE Alu 1 148 0 3 1218 432 86 0 0 chr15 83011601 83011671 -20483303 + (TC)n Simple_repeat Simple_repeat 1 70 0 3 1218 532 200 45 0 chr15 83012813 83012923 -20482051 - PB1D9 SINE Alu -5 115 1 3 1218 348 319 33 16 chr15 83013153 83013274 -20481700 - MLT1K LTR MaLR -326 269 147 3 1218 260 299 0 13 chr15 83013544 83013622 -20481352 + GA-rich Low_complexity Low_complexity 1 77 0 3 1218 1088 98 0 0 chr15 83014288 83014431 -20480543 + B1_Mus1 SINE Alu 1 143 -5 3 1218 291 28 0 0 chr15 83014433 83014469 -20480505 + (CCAA)n Simple_repeat Simple_repeat 1 36 0 3 1218 225 0 0 0 chr15 83014651 83014676 -20480298 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 3 1218 248 226 19 0 chr15 83014676 83014729 -20480245 + CT-rich Low_complexity Low_complexity 3 56 0 4 1218 474 101 0 0 chr15 83014732 83014801 -20480173 + (T)n Simple_repeat Simple_repeat 1 69 0 4 1218 1139 43 0 0 chr15 83014801 83014939 -20480035 - B1_Mus1 SINE Alu 0 148 11 4 1218 472 178 64 82 chr15 83014846 83014956 -20480018 - MT2B LTR ERVL -344 257 150 4 1218 232 250 14 56 chr15 83015008 83015080 -20479894 - MIR SINE MIR -92 170 102 4 1218 1347 90 26 5 chr15 83015097 83015286 -20479688 - B2_Mm2 SINE B2 -2 193 1 4 1218 1243 55 0 0 chr15 83015382 83015528 -20479446 - B1_Mus1 SINE Alu 0 148 3 4 1218 977 241 0 20 chr15 83015566 83015769 -20479205 - B3 SINE B2 -17 199 1 4 1218 442 220 48 48 chr15 83015893 83015998 -20478976 + MIR SINE MIR 68 172 -90 4 1218 625 190 91 41 chr15 83016139 83016260 -20478714 - B1_Mur3 SINE Alu -21 128 2 4 1218 23 78 0 0 chr15 83016260 83016311 -20478663 + AT_rich Low_complexity Low_complexity 1 51 0 5 1218 210 347 36 101 chr15 83016311 83016449 -20478525 - RSINE1 SINE B4 -33 132 4 5 1218 594 295 51 0 chr15 83016454 83016610 -20478364 - ID_B1 SINE B4 -16 208 45 5 1218 258 54 0 51 chr15 83016607 83016646 -20478328 - ORR1A2 LTR MaLR -290 37 1 5 1218 1362 159 54 65 chr15 83017050 83017240 -20477734 + MTC LTR MaLR 8 210 -211 5 1218 1443 67 17 0 chr15 83017240 83017418 -20477556 + B2_Mm2 SINE B2 2 182 -13 5 1218 387 0 0 0 chr15 83017418 83017461 -20477513 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 1218 1362 159 54 65 chr15 83017461 83017545 -20477429 + MTC LTR MaLR 211 279 -142 5 1218 2196 133 56 6 chr15 83017559 83017914 -20477060 + RLTR14 LTR ERV1 10 382 0 5 1218 2527 163 49 125 chr15 83017936 83018510 -20476464 - RMER19C LTR ERVK 0 611 82 5 1218 906 120 56 208 chr15 83018511 83018742 -20476232 + RMER19B LTR ERVK 27 222 -680 5 1218 2558 145 98 20 chr15 83018758 83019257 -20475717 + RMER19B LTR ERVK 349 886 -16 5 1218 1740 16 0 0 chr15 83019257 83019448 -20475526 + B2_Mm1a SINE B2 2 192 -1 6 1218 1261 54 0 0 chr15 83019457 83019604 -20475370 + B1_Mus2 SINE Alu 1 147 0 6 1218 510 148 11 0 chr15 83019641 83019729 -20475245 - RMER19C LTR ERVK -522 89 1 5 1218 521 231 137 0 chr15 83019729 83019842 -20475132 + MTC LTR MaLR 283 411 -10 5 1218 451 271 16 8 chr15 83019842 83019965 -20475009 + MTC-int LTR MaLR 3 126 -1132 5 1218 1036 176 33 6 chr15 83019962 83020145 -20474829 + MTC LTR MaLR 232 419 -2 5 1218 216 171 0 0 chr15 83020582 83020623 -20474351 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1218 766 61 0 0 chr15 83020624 83020721 -20474253 - ORR1A4 LTR MaLR -8 321 225 6 1218 5444 49 0 3 chr15 83020721 83021390 -20473584 + RLTR13D1 LTR ERVK 1 667 -139 6 1218 1290 34 0 0 chr15 83021390 83021537 -20473437 + B1_Mus1 SINE Alu 2 148 0 6 1218 2955 174 68 65 chr15 83021537 83021676 -20473298 + RLTR13D2 LTR ERVK 871 1002 -21 6 1218 885 132 0 202 chr15 83021697 83021915 -20473059 - ORR1A4 LTR MaLR -154 175 2 6 1218 418 113 59 22 chr15 83021916 83022052 -20472922 + (TA)n Simple_repeat Simple_repeat 2 142 0 6 1218 355 294 179 12 chr15 83022748 83022910 -20472064 + B3A SINE B2 8 196 -2 6 1218 752 189 58 7 chr15 83022940 83023079 -20471895 + B1_Mur2 SINE Alu 2 147 -2 7 1218 372 255 0 109 chr15 83023101 83023141 -20471833 + B2_Mm2 SINE B2 1 35 -160 7 1218 1204 68 0 13 chr15 83023141 83023290 -20471684 + B1_Mm SINE Alu 1 147 0 7 1218 372 255 0 109 chr15 83023290 83023359 -20471615 + B2_Mm2 SINE B2 36 98 -97 7 1218 524 179 84 0 chr15 83023386 83023481 -20471493 + RMER6B LTR ERVK 2 104 -357 7 1218 1107 102 0 0 chr15 83023495 83023632 -20471342 + B1_Mus2 SINE Alu 1 137 -10 7 1218 252 0 0 0 chr15 83023632 83023660 -20471314 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 7 1218 991 144 139 0 chr15 83023677 83023857 -20471117 + RMER6B LTR ERVK 1 205 -256 7 1218 835 75 0 0 chr15 83024066 83024172 -20470802 + RMER6B LTR ERVK 332 437 -24 7 1218 3010 61 200 9 chr15 83024188 83024618 -20470356 + RLTR1B LTR ERV1 1 512 0 7 1218 65286 18 0 0 chr15 83024618 83032173 -20462801 + MMERGLN-int LTR ERV1 1 7556 0 7 1218 3010 61 200 9 chr15 83032173 83032603 -20462371 + RLTR1B LTR ERV1 1 512 0 7 1218 336 274 0 36 chr15 83033384 83033494 -20461480 + PB1D10 SINE Alu 4 109 -8 7 1218 1034 213 46 11 chr15 83033508 83033788 -20461186 + RMER10A LTR ERVL 2 291 -151 7 1218 262 240 0 0 chr15 83033835 83033885 -20461089 - MTC LTR MaLR -68 353 304 8 1218 444 229 81 18 chr15 83033894 83034005 -20460969 + B3 SINE B2 97 214 -2 8 1218 2231 71 117 6 chr15 83034106 83034447 -20460527 + RLTR10 LTR ERVK 12 390 0 8 1218 524 242 20 0 chr15 83034447 83034546 -20460428 - B1_Mur1 SINE Alu -25 124 24 8 1218 210 143 0 0 chr15 83034560 83034595 -20460379 + (A)n Simple_repeat Simple_repeat 1 35 0 8 1218 216 67 0 0 chr15 83035522 83035552 -20459422 + (CCCCCT)n Simple_repeat Simple_repeat 3 32 0 8 1218 683 164 0 0 chr15 83035555 83035659 -20459315 - B1_Mus2 SINE Alu -14 133 30 8 1218 529 218 97 21 chr15 83035949 83036094 -20458880 + ID_B1 SINE B4 1 156 -68 8 1218 273 213 8 107 chr15 83036028 83036135 -20458839 + PB1D10 SINE Alu 9 104 -13 8 1218 1143 75 0 7 chr15 83036135 83036283 -20458691 + B1_Mus1 SINE Alu 2 148 0 8 1218 273 213 8 107 chr15 83036283 83036296 -20458678 + PB1D10 SINE Alu 105 116 -1 8 1218 282 258 202 0 chr15 83036302 83036391 -20458583 + RSINE1 SINE B4 39 145 -20 9 1218 1058 170 55 10 chr15 83036450 83036652 -20458322 - B3 SINE B2 0 216 6 9 1218 428 173 0 39 chr15 83036681 83036759 -20458215 + ID_B1 SINE B4 144 218 -6 8 1218 275 170 56 19 chr15 83036711 83036765 -20458209 + PB1D10 SINE Alu 62 117 0 9 1218 1293 41 0 0 chr15 83036767 83036914 -20458060 + B1_Mus1 SINE Alu 1 147 -1 9 1218 1214 55 0 0 chr15 83037059 83037204 -20457770 - B1_Mm SINE Alu -1 146 2 9 1218 2385 129 30 37 chr15 83037204 83037608 -20457366 - MTB_Mm LTR MaLR -6 401 1 9 1218 197 86 0 54 chr15 83037888 83037925 -20457049 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 9 1218 1142 89 0 7 chr15 83037925 83038072 -20456902 - B1_Mus1 SINE Alu 0 148 3 9 1218 725 139 29 177 chr15 83038333 83038508 -20456466 - B1_Mur4 SINE Alu 0 150 2 9 1218 1375 97 5 11 chr15 83038512 83038700 -20456274 - B2_Mm1t SINE B2 -6 187 1 9 1218 240 237 0 63 chr15 83038798 83038861 -20456113 - RMER21B LTR ERV1 -124 718 660 1 1218 673 236 229 9 chr15 83038891 83039109 -20455865 - RMER21B LTR ERV1 -278 564 299 1 1218 1326 223 261 57 chr15 83039148 83039264 -20455710 - RMER20B LTR ERVK 0 627 466 1 1218 383 38 19 0 chr15 83039264 83039317 -20455657 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1218 1326 223 261 57 chr15 83039317 83039636 -20455338 - RMER20B LTR ERVK -162 465 84 1 1218 1142 59 139 23 chr15 83039636 83039809 -20455165 - B2_Mm2 SINE B2 -1 194 2 1 1218 1326 223 261 57 chr15 83039809 83039885 -20455089 - RMER20B LTR ERVK -544 83 11 1 1218 522 176 59 0 chr15 83041193 83041295 -20453679 + PB1D9 SINE Alu 1 108 -12 1 1218 602 274 0 56 chr15 83041472 83041615 -20453359 - ID_B1 SINE B4 -8 216 82 1 1218 773 288 15 25 chr15 83041822 83042018 -20452956 + ID_B1 SINE B4 5 198 -26 1 1218 235 364 47 47 chr15 83042278 83042405 -20452569 - RMER17D LTR ERVK -20 869 743 1 1218 262 319 0 21 chr15 83042366 83042394 -20452580 - B1_Mm SINE Alu -53 94 1 1 1218 292 250 59 0 chr15 83042394 83042462 -20452512 - ID_B1 SINE B4 -71 153 82 1 1218 249 314 92 87 chr15 83042400 83042585 -20452389 - MT2B2 LTR ERVL -263 321 136 1 1218 941 98 2 0 chr15 83042712 83042846 -20452128 - B1_Mus1 SINE Alu -8 141 5 1 1218 1621 186 121 123 chr15 83042846 83042936 -20452038 - RMER1B Other Other -52 1014 921 1 1218 1330 109 16 16 chr15 83042936 83043123 -20451851 + B2_Mm2 SINE B2 3 189 -6 1 1218 1621 186 121 123 chr15 83043123 83043240 -20451734 - RMER1B Other Other -146 920 796 1 1218 238 167 0 0 chr15 83043240 83043276 -20451698 - U2 snRNA snRNA -152 36 1 1 1218 1621 186 121 123 chr15 83043276 83043602 -20451372 - RMER1B Other Other -146 795 446 1 1218 306 267 12 136 chr15 83043602 83043650 -20451324 - MT2B LTR ERVL -294 307 190 1 1218 525 206 18 36 chr15 83043650 83043761 -20451213 - B1_Mur3 SINE Alu -39 110 2 1 1218 1070 116 7 0 chr15 83043980 83044127 -20450847 - B1_Mus1 SINE Alu 0 148 1 1 1218 734 254 152 42 chr15 83044314 83044577 -20450397 - B4A SINE B4 0 292 1 1 1218 23 0 0 0 chr15 83044653 83044676 -20450298 + AT_rich Low_complexity Low_complexity 1 23 0 1 1218 1252 185 5 14 chr15 83044678 83044892 -20450082 - B3 SINE B2 -2 214 3 1 1218 724 156 86 0 chr15 83045001 83045129 -20449845 + B1_Mur2 SINE Alu 2 140 -9 1 1218 180 111 0 0 chr15 83045130 83045157 -20449817 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 1 1218 1149 221 9 0 chr15 83045157 83045370 -20449604 + B3 SINE B2 2 216 0 1 1218 1201 49 0 0 chr15 83045385 83045527 -20449447 + B1_Mm SINE Alu 1 142 -5 1 1218 246 32 0 0 chr15 83045531 83045562 -20449412 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1218 714 44 0 0 chr15 83045566 83045656 -20449318 + (GAA)n Simple_repeat Simple_repeat 2 91 0 1 1218 248 359 81 53 chr15 83045700 83045909 -20449065 + MLT1J LTR MaLR 250 464 -48 1 1218 282 250 14 0 chr15 83046734 83046806 -20448168 + B4 SINE B4 5 77 -215 1 1218 798 115 195 7 chr15 83046806 83046955 -20448019 + B2_Mm1t SINE B2 3 179 -14 1 1218 293 89 54 0 chr15 83047034 83047090 -20447884 + B2_Mm2 SINE B2 137 195 0 1 1218 661 254 62 52 chr15 83047098 83047229 -20447745 + B4A SINE B4 70 199 -93 1 1218 827 219 125 0 chr15 83047229 83047421 -20447553 + B3 SINE B2 1 216 0 1 1218 661 251 58 53 chr15 83047421 83047513 -20447461 + B4A SINE B4 200 292 0 1 1218 380 214 11 33 chr15 83047533 83047717 -20447257 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1218 469 224 4 7 chr15 83047733 83048025 -20446949 + (CA)n Simple_repeat Simple_repeat 1 290 0 1 1218 202 169 0 63 chr15 83048131 83048194 -20446780 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 1 1218 729 124 31 5 chr15 83048431 83048569 -20446405 - B1_Mur1 SINE Alu 0 148 13 1 1218 761 245 79 11 chr15 83048573 83048763 -20446211 + B3 SINE B2 1 203 -13 1 1218 225 128 0 0 chr15 83048770 83048809 -20446165 + B3 SINE B2 168 206 -10 1 1218 931 222 27 68 chr15 83048818 83049040 -20445934 - ID_B1 SINE B4 -3 221 9 1 1218 432 301 4 82 chr15 83049037 83049194 -20445780 - ID_B1 SINE B4 -151 141 1 1 1218 2044 148 44 0 chr15 83049229 83049573 -20445401 - RLTR15 LTR ERVK 0 359 1 1 1218 4505 106 60 23 chr15 83049886 83050613 -20444361 - RMER6A LTR ERVK 0 756 3 1 1218 1573 275 34 29 chr15 83050637 83051079 -20443895 - RLTR18B LTR ERVK -6 506 63 1 1218 630 230 12 8 chr15 83051598 83051728 -20443246 - ID_B1 SINE B4 -46 246 108 1 1218 908 97 54 29 chr15 83052437 83052599 -20442375 + B2_Mm2 SINE B2 1 170 -46 1 1218 201 74 0 0 chr15 83052602 83052629 -20442345 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 1 1218 1153 29 36 0 chr15 83052964 83053102 -20441872 + B1_Mm SINE Alu 2 144 -3 1 1218 297 0 0 0 chr15 83053102 83053135 -20441839 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1218 2002 180 39 34 chr15 83053218 83053631 -20441343 + MTD LTR MaLR 1 415 -4 1 1218 2905 40 81 3 chr15 83055502 83055873 -20439101 + MTB LTR MaLR 1 400 0 1 1218 295 311 21 53 chr15 83056199 83056294 -20438680 + B1F SINE Alu 3 94 -55 1 1218 233 283 99 84 chr15 83056294 83056307 -20438667 + ID_B1 SINE B4 84 193 -31 1 1218 580 270 21 78 chr15 83056307 83056500 -20438474 - B3A SINE B2 -16 182 1 1 1218 233 283 99 84 chr15 83056500 83056521 -20438453 + ID_B1 SINE B4 194 214 -10 1 1218 217 25 0 91 chr15 83057251 83057295 -20437679 + (TAAAAA)n Simple_repeat Simple_repeat 3 42 0 1 1218 1024 37 104 0 chr15 83057298 83057432 -20437542 + B1_Mus1 SINE Alu 1 148 0 1 1218 462 303 63 0 chr15 83059491 83059633 -20435341 + B4A SINE B4 2 152 -140 1 1218 876 241 35 15 chr15 83059676 83059878 -20435096 - B3 SINE B2 -6 210 5 1 1218 627 259 17 62 chr15 83059889 83060066 -20434908 - B3A SINE B2 0 198 30 1 1218 289 270 0 0 chr15 83060098 83060161 -20434813 - PB1D10 SINE Alu -14 103 41 1 1218 222 37 0 0 chr15 83060577 83060604 -20434370 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1 1218 798 178 0 82 chr15 83060605 83060752 -20434222 - B1_Mus1 SINE Alu -12 136 2 1 1218 281 290 103 37 chr15 83061436 83061572 -20433402 + B3A SINE B2 52 196 -2 1 1218 1207 112 41 0 chr15 83061606 83061775 -20433199 + B2_Mm2 SINE B2 1 176 -19 1 1218 1172 62 0 14 chr15 83061792 83061940 -20433034 - B1_Mus1 SINE Alu -2 146 1 1 1218 638 180 15 62 chr15 83061970 83062100 -20432874 + B1_Mus1 SINE Alu 24 147 -1 1 1218 1614 152 98 13 chr15 83062508 83062810 -20432164 + ORR1B2 LTR MaLR 1 328 -39 1 1218 784 94 51 0 chr15 83062810 83062927 -20432047 + B2_Mm2 SINE B2 3 125 -70 1 1218 267 244 90 90 chr15 83063024 83063165 -20431809 - B1F SINE Alu -2 147 1 1 1218 348 201 503 65 chr15 83063165 83063177 -20431797 - ID_B1 SINE B4 -2 222 3 1 1218 268 217 165 24 chr15 83063185 83063270 -20431704 - PB1D10 SINE Alu 0 117 21 1 1218 410 180 33 33 chr15 83063614 83063706 -20431268 - PB1D9 SINE Alu 0 120 29 1 1218 1339 60 54 16 chr15 83064927 83065112 -20429862 + B2_Mm2 SINE B2 3 194 -1 1 1218 1546 34 0 0 chr15 83065117 83065292 -20429682 - B2_Mm1t SINE B2 -18 175 1 1 1218 733 252 92 19 chr15 83065849 83066055 -20428919 + ID_B1 SINE B4 2 222 -2 1 1218 1134 123 278 37 chr15 83066228 83066473 -20428501 + ORR1B1 LTR MaLR 1 304 -90 1 1218 645 214 96 19 chr15 83066488 83066645 -20428329 - B3 SINE B2 -46 170 2 1 1218 1193 82 0 0 chr15 83066680 83066827 -20428147 - B1_Mus2 SINE Alu 0 147 1 1 1218 685 97 0 0 chr15 83066837 83066930 -20428044 + ORR1B2 LTR MaLR 275 367 0 1 1218 4006 172 81 84 chr15 83067119 83067606 -20427368 + RMER17B LTR ERVK 1 438 -520 1 1218 441 0 0 0 chr15 83067606 83067655 -20427319 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 1218 4006 172 81 84 chr15 83067655 83068128 -20426846 + RMER17B LTR ERVK 439 958 0 1 1218 4522 75 63 0 chr15 83068533 83069202 -20425772 - ORR1A1-int LTR MaLR -983 809 99 1 1218 2532 66 9 12 chr15 83069220 83069559 -20425415 - ORR1A1 LTR MaLR -8 338 1 1 1218 13508 63 20 2 chr15 83069560 83071320 -20423654 - ORR1A1-int LTR MaLR -1 1791 1 1 1218 1496 44 16 0 chr15 83071320 83071502 -20423472 - ORR1A1 LTR MaLR 0 346 162 1 1218 274 253 0 67 chr15 83071585 83071674 -20423300 + B3 SINE B2 15 97 -119 1 1218 396 0 0 0 chr15 83071686 83071730 -20423244 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1218 563 157 18 118 chr15 83072337 83072433 -20422541 + B1_Mus1 SINE Alu 3 94 -54 1 1218 1064 112 81 32 chr15 83072433 83072618 -20422356 + B2_Mm2 SINE B2 2 195 0 1 1218 563 149 15 130 chr15 83072618 83072661 -20422313 + B1_Mus1 SINE Alu 95 128 -20 1 1218 221 276 0 33 chr15 83072674 83072734 -20422240 + B1F1 SINE Alu 1 58 -91 1 1218 371 283 22 0 chr15 83073001 83073093 -20421881 + RSINE1 SINE B4 3 96 -69 1 1218 304 289 37 37 chr15 83073093 83073109 -20421865 + B3A SINE B2 2 109 -89 1 1218 460 180 53 26 chr15 83073306 83073420 -20421554 + PB1D10 SINE Alu 1 117 0 1 1218 881 232 26 10 chr15 83073430 83073622 -20421352 + B3 SINE B2 2 196 -20 1 1218 368 176 92 71 chr15 83073753 83073851 -20421123 - PB1D9 SINE Alu 0 120 21 1 1218 796 235 77 43 chr15 83073875 83073947 -20421027 - B3 SINE B2 0 216 150 1 1218 1088 55 0 110 chr15 83073947 83074045 -20420929 - B1_Mus2 SINE Alu 0 147 54 1 1218 1456 58 26 0 chr15 83074045 83074234 -20420740 + B2_Mm2 SINE B2 2 195 0 1 1218 1088 55 0 110 chr15 83074234 83074299 -20420675 - B1_Mus2 SINE Alu -94 53 2 1 1218 796 235 77 43 chr15 83074299 83074435 -20420539 - B3 SINE B2 -67 149 1 1 1218 548 66 0 26 chr15 83074500 83074578 -20420396 + B2_Mm2 SINE B2 2 77 -118 1 1218 588 174 30 34 chr15 83074677 83074809 -20420165 - RSINE1 SINE B4 -170 122 1 1 1218 274 269 90 70 chr15 83074826 83074926 -20420048 + ID_B1 SINE B4 81 182 -42 1 1218 785 162 28 7 chr15 83075007 83075150 -20419824 + B1_Mus2 SINE Alu 1 146 -1 1 1218 213 118 43 14 chr15 83075155 83075224 -20419750 + A-rich Low_complexity Low_complexity 4 74 0 1 1218 684 244 132 0 chr15 83075477 83075674 -20419300 - ID_B1 SINE B4 -1 223 1 1 1218 1781 122 124 16 chr15 83075773 83076080 -20418894 - MTC LTR MaLR -73 348 9 1 1218 1321 68 23 0 chr15 83076140 83076316 -20418658 + B2_Mm1t SINE B2 2 181 -12 2 1218 248 58 77 0 chr15 83076342 83076394 -20418580 + B2_Mm2 SINE B2 137 192 -3 2 1218 225 283 92 92 chr15 83076390 83076487 -20418487 + RSINE1 SINE B4 28 125 -40 2 1218 180 97 0 0 chr15 83076487 83076518 -20418456 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1218 225 283 92 92 chr15 83076518 83076529 -20418445 + RSINE1 SINE B4 126 136 -29 2 1218 490 249 173 46 chr15 83076619 83076926 -20418048 - RMER10A LTR ERVL -24 418 73 2 1218 798 193 15 0 chr15 83077868 83078003 -20416971 - B1_Mur3 SINE Alu -12 137 1 2 1218 22 35 0 0 chr15 83078015 83078044 -20416930 + AT_rich Low_complexity Low_complexity 1 29 0 2 1218 1242 54 0 0 chr15 83078054 83078202 -20416772 - B1_Mus1 SINE Alu 0 148 1 2 1218 1328 73 28 6 chr15 83078202 83078379 -20416595 - B2_Mm2 SINE B2 -13 182 1 2 1218 252 122 0 0 chr15 83079085 83079126 -20415848 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1218 446 266 131 15 chr15 83079204 83079334 -20415640 + ID_B1 SINE B4 63 207 -17 2 1218 428 272 125 22 chr15 83079413 83079441 -20415533 + B3 SINE B2 14 41 -175 2 1218 1238 62 0 0 chr15 83079441 83079587 -20415387 + B1_Mus2 SINE Alu 1 146 -1 2 1218 1565 23 6 0 chr15 83079592 83079768 -20415206 + B2_Mm1a SINE B2 2 178 -15 2 1218 210 37 0 0 chr15 83079770 83079797 -20415177 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1218 428 272 125 22 chr15 83079797 83079943 -20415031 + B3 SINE B2 47 214 -2 2 1218 1241 54 0 0 chr15 83080340 83080487 -20414487 + B1_Mus2 SINE Alu 1 147 0 2 1218 687 149 35 0 chr15 83080502 83080616 -20414358 + B1_Mur2 SINE Alu 27 144 -5 2 1218 234 303 37 105 chr15 83082491 83082653 -20412321 - MIRc SINE MIR -115 153 3 2 1218 321 226 115 57 chr15 83083062 83083184 -20411790 - B1F SINE Alu 0 149 21 2 1218 257 342 65 77 chr15 83083152 83083217 -20411757 + B4 SINE B4 32 94 -198 2 1218 585 179 50 25 chr15 83083217 83083337 -20411637 + B1_Mur1 SINE Alu 2 124 -25 2 1218 807 239 5 22 chr15 83083371 83083555 -20411419 + B3A SINE B2 18 198 0 2 1218 912 136 20 26 chr15 83083730 83083881 -20411093 - B1_Mur4 SINE Alu 0 150 1 2 1218 207 0 0 0 chr15 83083889 83083912 -20411062 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 1218 1031 219 28 9 chr15 83083915 83083942 -20411032 - B3 SINE B2 0 216 192 2 1218 239 0 32 0 chr15 83083942 83083973 -20411001 + (TTTG)n Simple_repeat Simple_repeat 3 34 0 2 1218 1031 219 28 9 chr15 83083973 83084157 -20410817 - B3 SINE B2 -25 191 3 2 1218 1048 168 101 29 chr15 83084287 83084496 -20410478 + URR1A DNA MER1_type 2 225 -1 2 1218 1135 75 7 0 chr15 83084548 83084694 -20410280 - B1_Mus2 SINE Alu 0 147 1 2 1218 239 0 32 0 chr15 83084917 83084948 -20410026 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 2 1218 473 178 352 13 chr15 83085344 83085503 -20409471 + B3 SINE B2 4 216 0 2 1218 1241 49 0 0 chr15 83085509 83085652 -20409322 + B1_Mm SINE Alu 2 144 -3 2 1218 342 0 0 0 chr15 83085652 83085690 -20409284 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2 1218 339 25 0 0 chr15 83085691 83085731 -20409243 + (GA)n Simple_repeat Simple_repeat 1 40 0 2 1218 317 266 186 8 chr15 83085732 83085861 -20409113 + B3A SINE B2 37 188 -10 2 1218 637 280 32 6 chr15 83085876 83086034 -20408940 - B3A SINE B2 -36 162 1 2 1218 225 250 117 13 chr15 83086265 83086342 -20408632 + ORR1A4 LTR MaLR 106 190 -139 2 1218 965 204 16 16 chr15 83087224 83087408 -20407566 + ID_B1 SINE B4 40 223 -1 2 1218 1243 34 0 20 chr15 83087411 83087553 -20407421 + B1_Mus2 SINE Alu 1 141 -6 2 1218 342 0 0 0 chr15 83087553 83087591 -20407383 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 2 1218 261 79 0 0 chr15 83087600 83087638 -20407336 + B3A SINE B2 2 39 -159 2 1218 1142 95 0 0 chr15 83088138 83088285 -20406689 + B1_Mus1 SINE Alu 2 148 0 2 1218 1344 94 10 30 chr15 83089932 83090129 -20404845 + B2_Mm2 SINE B2 1 193 -2 2 1218 198 0 0 0 chr15 83090412 83090434 -20404540 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1218 4742 52 24 0 chr15 83092970 83093543 -20401431 + LTRIS_Mus LTR ERV1 1 587 0 2 1218 432 250 74 136 chr15 83093552 83093714 -20401260 + B3A SINE B2 44 197 -1 2 1218 325 331 107 27 chr15 83093717 83093866 -20401108 + RSINE1 SINE B4 3 163 -2 2 1218 22 0 0 0 chr15 83093868 83093890 -20401084 + AT_rich Low_complexity Low_complexity 1 22 0 2 1218 811 77 0 0 chr15 83093909 83094013 -20400961 - B2_Mm2 SINE B2 -91 104 1 2 1218 1180 161 106 84 chr15 83094013 83094196 -20400778 - RLTR24 LTR ERV1 -194 335 161 2 1218 1173 54 0 39 chr15 83094196 83094349 -20400625 - B1_Mus1 SINE Alu 0 148 2 2 1218 1180 175 32 32 chr15 83094349 83094541 -20400433 - RLTR24 LTR ERV1 -309 220 30 2 1218 754 150 264 0 chr15 83094541 83094708 -20400266 + B3 SINE B2 2 212 -4 2 1218 243 146 0 0 chr15 83094716 83094757 -20400217 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1218 334 67 22 0 chr15 83094765 83094810 -20400164 - RLTR24 LTR ERV1 -483 46 1 2 1218 369 62 0 0 chr15 83094839 83094887 -20400087 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1218 719 198 142 42 chr15 83094905 83095095 -20399879 + B3 SINE B2 2 210 -6 2 1218 960 122 0 33 chr15 83095115 83095267 -20399707 + B1_Mur3 SINE Alu 2 148 -1 2 1218 365 245 93 19 chr15 83096102 83096131 -20398843 + ID_B1 SINE B4 53 168 -56 2 1218 467 152 0 0 chr15 83096131 83096210 -20398764 + PB1D10 SINE Alu 9 87 -30 2 1218 306 294 150 92 chr15 83096214 83096248 -20398726 - ID_B1 SINE B4 0 224 199 2 1218 4812 108 29 7 chr15 83096248 83096948 -20398026 - RLTR19B LTR ERVK 0 715 1 2 1218 306 294 150 92 chr15 83096948 83097033 -20397941 - ID_B1 SINE B4 -26 198 98 2 1218 4094 50 4 18 chr15 83097058 83097568 -20397406 + RLTR1C LTR ERV1 1 503 0 2 1218 2583 170 26 34 chr15 83097568 83098105 -20396869 + MMVL30-int LTR ERV1 1 533 -7023 2 1218 246 81 0 0 chr15 83098143 83098180 -20396794 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 2 1218 5194 84 14 3 chr15 83098560 83099290 -20395684 + MMVL30-int LTR ERV1 716 1453 -2245 2 1218 630 108 61 202 chr15 83099373 83099571 -20395403 + MMVL30-int LTR ERV1 960 1129 -2170 2 152 337 125 28 0 chr15 83099582 83099654 -20395320 + MMVL30-int LTR ERV1 1438 1511 -2187 2 1219 7604 83 36 18 chr15 83099913 83101169 -20393805 + MMVL30-int LTR ERV1 1408 2826 -872 2 1219 670 288 15 10 chr15 83101228 83101500 -20393474 + RLTR6-int LTR ERV1 4222 4563 -3215 2 1219 1364 154 47 111 chr15 83101578 83101922 -20393052 - RLTRETN_Mm LTR ERVK 0 322 1 2 1219 475 123 136 23 chr15 83102139 83102235 -20392739 + RLTR6-int LTR ERV1 2874 2943 -755 2 1219 3228 104 73 97 chr15 83102252 83102878 -20392096 + RLTR1B-int LTR ERV1 2689 3299 0 2 1219 4333 44 2 0 chr15 83102878 83103380 -20391594 + RLTR1C LTR ERV1 1 503 0 2 1219 907 176 0 0 chr15 83103501 83103643 -20391331 - B1_Mur3 SINE Alu -7 142 1 2 1219 435 95 0 0 chr15 83104269 83104343 -20390631 + (TG)n Simple_repeat Simple_repeat 2 75 0 2 1219 321 194 55 101 chr15 83104354 83104416 -20390558 - L1MEg LINE L1 -4124 1960 1896 2 1219 1253 48 0 0 chr15 83104416 83104563 -20390411 - B1_Mus2 SINE Alu 0 147 1 2 1219 321 194 55 101 chr15 83104563 83104609 -20390365 - L1MEg LINE L1 -4189 1895 1857 2 1219 1604 50 206 0 chr15 83104638 83104876 -20390098 + ORR1A1-int LTR MaLR 1455 1741 -51 2 1219 1269 38 6 0 chr15 83104894 83105052 -20389922 + ORR1A1-int LTR MaLR 1634 1792 0 2 1219 2892 49 0 11 chr15 83105052 83105402 -20389572 + ORR1A1 LTR MaLR 1 346 0 2 1219 271 268 0 40 chr15 83105414 83105488 -20389486 - RSINE1 SINE B4 -30 135 65 2 1219 808 99 41 0 chr15 83105927 83106048 -20388926 + B1_Mur1 SINE Alu 24 149 0 2 1219 278 318 29 50 chr15 83105929 83106068 -20388906 + B4A SINE B4 111 246 -46 2 1219 1897 114 36 54 chr15 83106164 83106497 -20388477 - ORR1A4 LTR MaLR 0 329 3 2 1219 1333 101 0 16 chr15 83106524 83106716 -20388258 - B2_Mm2 SINE B2 -6 189 1 2 1219 801 153 51 0 chr15 83106796 83106933 -20388041 - B1_Mur1 SINE Alu -5 144 1 2 1219 2261 126 78 3 chr15 83107185 83107544 -20387430 - ORR1B1 LTR MaLR 0 394 9 2 1219 3254 38 20 5 chr15 83108221 83108615 -20386359 - MTB LTR MaLR 0 400 1 2 1219 294 281 20 20 chr15 83108759 83108857 -20386117 + (CACCAT)n Simple_repeat Simple_repeat 6 103 0 2 1219 207 0 0 0 chr15 83109034 83109057 -20385917 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1219 405 167 0 29 chr15 83109061 83109129 -20385845 - B1_Mus2 SINE Alu -14 133 68 2 1219 529 160 45 53 chr15 83109102 83109234 -20385740 + ORR1B1 LTR MaLR 25 155 -239 2 1219 410 331 22 0 chr15 83109250 83109386 -20385588 + MLT1A0 LTR MaLR 63 201 -164 2 1219 946 155 7 7 chr15 83109543 83109692 -20385282 + B1_Mur3 SINE Alu 1 149 0 2 1219 194 0 39 0 chr15 83109693 83109719 -20385255 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 2 1219 281 268 10 114 chr15 83110165 83110272 -20384702 + B1F2 SINE Alu 1 97 -23 2 1219 278 296 14 0 chr15 83110278 83110349 -20384625 + ID4_ SINE ID 5 76 -7 2 1219 318 254 104 34 chr15 83110567 83110721 -20384253 - MLT2B2 LTR ERVL -390 211 44 2 1219 581 174 45 9 chr15 83110731 83110841 -20384133 - PB1D9 SINE Alu 0 120 7 2 1219 1370 68 11 22 chr15 83110884 83111065 -20383909 + B2_Mm1t SINE B2 1 179 -14 2 1219 269 30 0 0 chr15 83111147 83111180 -20383794 + B2_Mm1t SINE B2 4 36 -157 2 1219 408 40 0 0 chr15 83111233 83111283 -20383691 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1219 198 103 0 0 chr15 83111366 83111395 -20383579 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1219 805 160 34 14 chr15 83111397 83111543 -20383431 - B1_Mur4 SINE Alu -1 149 1 2 1219 402 327 106 12 chr15 83111716 83111886 -20383088 + B3A SINE B2 2 187 -11 2 1219 441 280 29 4 chr15 83112201 83112346 -20382628 + ID_B1 SINE B4 93 246 -46 2 1219 759 145 0 8 chr15 83112453 83112578 -20382396 + B1_Mur4 SINE Alu 27 150 0 2 1219 1004 201 58 5 chr15 83112609 83112814 -20382160 + B3 SINE B2 1 216 0 2 1219 633 245 69 6 chr15 83112818 83112978 -20381996 + B4A SINE B4 44 213 -79 2 1219 995 210 50 9 chr15 83112981 83113202 -20381772 + RLTR42 LTR ERVK 4 233 -6 2 1219 5211 123 23 27 chr15 83113264 83113689 -20381285 + Lx5 LINE L1 5589 6020 -1030 3 1219 1114 69 0 0 chr15 83113689 83113833 -20381141 + B1_Mm SINE Alu 2 145 -2 3 1219 189 0 0 0 chr15 83113833 83113854 -20381120 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 3 1219 5211 123 23 27 chr15 83113854 83114289 -20380685 + Lx5 LINE L1 6021 6446 -604 3 1219 517 61 0 12 chr15 83114287 83114380 -20380594 + L1Md_F2 LINE L1 6498 6584 0 3 1219 3494 142 11 67 chr15 83114375 83115030 -20379944 + Lx5 LINE L1 6432 7049 -1 3 1219 1171 41 7 0 chr15 83115040 83115185 -20379789 + B1_Mus2 SINE Alu 1 146 -1 3 1219 797 172 0 14 chr15 83115789 83115936 -20379038 - B1_Mur3 SINE Alu 0 149 5 3 1219 1122 113 48 16 chr15 83115948 83116137 -20378837 - B2_Mm2 SINE B2 0 195 1 3 1219 305 299 26 0 chr15 83116366 83116443 -20378531 - PB1D10 SINE Alu -37 80 2 3 1219 318 50 0 0 chr15 83116515 83116555 -20378419 + (TTA)n Simple_repeat Simple_repeat 3 42 0 3 1219 218 255 0 0 chr15 83116599 83116620 -20378354 + T-rich Low_complexity Low_complexity 32 52 0 3 1219 1238 27 0 0 chr15 83116620 83116768 -20378206 - B1_Mus1 SINE Alu 0 148 1 3 1219 218 255 0 0 chr15 83116768 83116797 -20378177 + T-rich Low_complexity Low_complexity 3 31 0 3 1219 658 161 340 6 chr15 83116805 83116967 -20378007 - B3 SINE B2 0 216 1 3 1219 331 319 29 15 chr15 83117018 83117155 -20377819 - ID_B1 SINE B4 -4 220 82 3 1219 1838 195 133 22 chr15 83117348 83117850 -20377124 + RMER4B LTR ERVK 1 574 -11 3 1219 420 20 0 0 chr15 83117937 83117986 -20376988 + (TCC)n Simple_repeat Simple_repeat 3 51 0 3 1219 325 122 13 35 chr15 83117990 83118085 -20376889 - B2_Mm2 SINE B2 -17 178 47 3 1219 914 132 119 0 chr15 83118124 83118283 -20376691 - B2_Mm1t SINE B2 -14 179 2 3 1219 180 0 0 0 chr15 83118323 83118343 -20376631 + (TGGGGG)n Simple_repeat Simple_repeat 5 24 0 3 1219 400 143 25 12 chr15 83118794 83118885 -20376089 + B1_Mur4 SINE Alu 48 150 0 3 1219 233 238 0 31 chr15 83118883 83118948 -20376026 - MLT1A0 LTR MaLR -54 311 249 3 1219 602 272 37 6 chr15 83119597 83119760 -20375214 + ID_B1 SINE B4 2 169 -55 3 1219 380 230 0 11 chr15 83119813 83119901 -20375073 + PB1D10 SINE Alu 23 109 -8 3 1219 712 200 49 14 chr15 83119926 83120068 -20374906 - B1_Mur1 SINE Alu -2 147 1 3 1219 303 300 0 98 chr15 83120123 83120245 -20374729 - B3 SINE B2 0 216 107 3 1219 219 69 0 0 chr15 83120284 83120313 -20374661 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 3 1219 884 192 89 16 chr15 83120313 83120496 -20374478 + MTD LTR MaLR 21 218 -201 3 1219 545 66 368 0 chr15 83120675 83120781 -20374193 + B2_Mm2 SINE B2 47 191 -4 3 1219 1138 93 6 28 chr15 83121682 83122048 -20372926 + (TTC)n Simple_repeat Simple_repeat 1 357 0 3 1219 240 184 0 0 chr15 83122050 83122099 -20372875 + CT-rich Low_complexity Low_complexity 2 50 0 3 1219 1766 157 55 50 chr15 83122204 83122566 -20372408 - ORR1D1 LTR MaLR -10 364 1 3 1219 261 0 0 0 chr15 83123099 83123128 -20371846 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 1219 457 269 76 0 chr15 83123261 83123380 -20371594 - RSINE1 SINE B4 -25 140 13 3 1219 1390 176 122 98 chr15 83123699 83123899 -20371075 - MTD LTR MaLR 0 419 211 3 1219 970 200 78 5 chr15 83123899 83124090 -20370884 - B3 SINE B2 -10 206 2 3 1219 1390 176 122 98 chr15 83124090 83124298 -20370676 - MTD LTR MaLR -209 210 1 3 1219 243 0 0 0 chr15 83125253 83125280 -20369694 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 1219 414 0 0 0 chr15 83125280 83125325 -20369649 + (GA)n Simple_repeat Simple_repeat 1 46 0 3 1219 848 232 23 41 chr15 83125751 83125971 -20369003 - ID_B1 SINE B4 -8 216 1 3 1219 1676 140 86 29 chr15 83127040 83127238 -20367736 - RMER17C LTR ERVK -5 405 181 3 1219 333 0 0 0 chr15 83127238 83127275 -20367699 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 1219 1676 140 86 29 chr15 83127275 83127459 -20367515 - RMER17C LTR ERVK -230 180 1 3 1219 391 149 40 0 chr15 83128330 83128404 -20366570 - B1_Mur4 SINE Alu -3 147 71 3 1219 572 225 71 19 chr15 83128423 83128577 -20366397 - B3A SINE B2 -35 163 2 3 1219 556 181 268 12 chr15 83128868 83129036 -20365938 - B3 SINE B2 -1 215 5 3 1219 1077 110 18 0 chr15 83129047 83129210 -20365764 - B2_Mm2 SINE B2 -3 192 27 3 1219 795 81 0 0 chr15 83129215 83129326 -20365648 - B2_Mm1t SINE B2 0 193 83 3 1219 944 161 10 59 chr15 83129339 83129543 -20365431 + B2_Mm2 SINE B2 2 195 0 3 1219 182 67 43 43 chr15 83131646 83131693 -20363281 + GA-rich Low_complexity Low_complexity 4 50 0 3 1219 974 80 0 55 chr15 83132014 83132160 -20362814 + B1_Mus1 SINE Alu 2 139 -9 3 1219 252 0 0 0 chr15 83132160 83132188 -20362786 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 3 1219 481 216 73 15 chr15 83132541 83132677 -20362297 + B1F2 SINE Alu 1 144 -5 3 1219 474 200 9 45 chr15 83132679 83132789 -20362185 + PB1D9 SINE Alu 2 107 -13 3 1219 778 199 93 16 chr15 83132882 83133076 -20361898 + B3 SINE B2 8 216 0 3 1219 1057 67 0 0 chr15 83133146 83133281 -20361693 + B1_Mus1 SINE Alu 2 136 -12 3 1219 342 0 0 0 chr15 83133282 83133320 -20361654 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 3 1219 379 175 83 110 chr15 83133333 83133442 -20361532 - PB1D10 SINE Alu -11 106 1 3 1219 595 254 92 33 chr15 83134830 83135103 -20359871 + B4A SINE B4 4 292 0 3 1219 315 129 9 37 chr15 83135544 83135613 -20359361 + B1_Mus2 SINE Alu 51 113 -36 3 1219 186 143 0 0 chr15 83135906 83135941 -20359033 + (T)n Simple_repeat Simple_repeat 1 35 0 3 1219 846 200 0 0 chr15 83137660 83137903 -20357071 + (TG)n Simple_repeat Simple_repeat 1 243 0 3 1219 290 211 156 10 chr15 83139127 83139223 -20355751 + PB1D7 SINE Alu 6 115 -5 3 1219 22 0 0 0 chr15 83139686 83139708 -20355266 + AT_rich Low_complexity Low_complexity 1 22 0 3 1219 248 360 83 19 chr15 83143198 83143354 -20351620 - MIR SINE MIR -90 172 7 3 1219 339 25 0 0 chr15 83144353 83144393 -20350581 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1219 477 234 54 9 chr15 83144400 83144512 -20350462 - ID_B1 SINE B4 -20 204 88 3 1219 1001 122 62 57 chr15 83145439 83145631 -20349343 + B2_Mm2 SINE B2 1 193 -2 3 1219 625 93 196 0 chr15 83145641 83145748 -20349226 + B1_Mus2 SINE Alu 2 129 -18 3 1219 445 234 118 46 chr15 83145823 83145975 -20348999 - RSINE1 SINE B4 0 165 3 3 1219 283 354 9 9 chr15 83147299 83147413 -20347561 - MIRb SINE MIR -14 254 141 3 1219 394 280 64 56 chr15 83150185 83150310 -20344664 + RSINE1 SINE B4 38 163 -2 3 1219 260 259 206 0 chr15 83150425 83150556 -20344418 - L1MB5 LINE L1 -238 5936 5779 3 1219 1095 150 62 5 chr15 83150767 83150957 -20344017 - URR1B DNA MER1_type 0 225 25 3 1219 1671 273 109 109 chr15 83150957 83151713 -20343261 + RMER12 LTR ERVK 1 746 -576 3 1219 1088 49 14 7 chr15 83151713 83151858 -20343116 - B1_Mus2 SINE Alu 0 147 2 3 1219 1671 273 109 109 chr15 83151858 83152093 -20342881 + RMER12 LTR ERVK 747 993 -329 3 1219 1046 101 69 53 chr15 83152093 83152120 -20342854 - B2_Mm2 SINE B2 0 195 170 3 1219 1170 55 0 7 chr15 83152120 83152268 -20342706 - B1_Mm SINE Alu 0 147 1 3 1219 1046 101 69 53 chr15 83152268 83152428 -20342546 - B2_Mm2 SINE B2 -26 169 5 3 1219 1671 236 106 70 chr15 83152428 83152673 -20342301 + RMER12 LTR ERVK 994 1293 -29 3 1219 2381 136 7 29 chr15 83153547 83153963 -20341011 + MTB_Mm LTR MaLR 1 407 0 3 1219 307 164 298 2 chr15 83154068 83154162 -20340812 - PB1D9 SINE Alu 0 120 1 3 1219 1817 49 12 12 chr15 83154214 83154461 -20340513 + L1Md_F2 LINE L1 6324 6570 -12 3 1219 527 179 125 0 chr15 83154826 83154938 -20340036 + RSINE1 SINE B4 9 134 -31 3 1219 694 272 39 0 chr15 83155118 83155298 -20339676 - B3 SINE B2 -28 188 2 3 1219 246 300 0 103 chr15 83155804 83155882 -20339092 - ID4_ SINE ID -5 78 9 3 1219 278 282 38 0 chr15 83155892 83155973 -20339001 - ID4 SINE ID -52 100 14 3 1219 405 189 0 0 chr15 83155999 83156089 -20338885 + (CCA)n Simple_repeat Simple_repeat 3 92 0 3 1219 297 258 97 0 chr15 83156508 83156601 -20338373 + RMER10A LTR ERVL 322 423 -19 3 1219 252 122 0 0 chr15 83156618 83156659 -20338315 + (CCA)n Simple_repeat Simple_repeat 1 41 0 3 1219 306 148 0 0 chr15 83156660 83156677 -20338297 + (TCC)n Simple_repeat Simple_repeat 3 19 0 3 1219 1549 42 0 0 chr15 83156677 83156870 -20338104 - B2_Mm1a SINE B2 0 193 1 3 1219 306 148 0 0 chr15 83156870 83156913 -20338061 + (TCC)n Simple_repeat Simple_repeat 2 44 0 3 1219 315 246 0 0 chr15 83157312 83157377 -20337597 + ID4 SINE ID 2 66 -17 3 1219 366 23 0 0 chr15 83157392 83157435 -20337539 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1219 243 142 43 0 chr15 83158310 83158364 -20336610 - PB1D7 SINE Alu -84 63 8 3 1219 810 105 52 22 chr15 83158381 83158517 -20336457 - B1_Mur4 SINE Alu 0 150 11 3 1219 1086 66 129 23 chr15 83158524 83158695 -20336279 - B2_Mm2 SINE B2 -6 189 1 3 1219 271 265 60 0 chr15 83158718 83158801 -20336173 - L1MA5 LINE L1 0 6300 6213 3 1219 274 327 26 0 chr15 83159011 83159124 -20335850 + ID_B1 SINE B4 90 205 -19 3 1219 330 80 0 0 chr15 83159124 83159174 -20335800 + (GA)n Simple_repeat Simple_repeat 2 51 0 3 1219 465 254 78 21 chr15 83159334 83159475 -20335499 - B1F1 SINE Alu 0 149 1 3 1219 569 256 46 15 chr15 83159341 83159495 -20335479 - ID_B1 SINE B4 -70 222 70 3 1219 601 246 15 0 chr15 83160131 83160265 -20334709 + ID_B1 SINE B4 82 217 -7 3 1219 643 231 0 13 chr15 83160357 83160506 -20334468 + B1_Mur1 SINE Alu 3 149 0 3 1219 1134 55 0 0 chr15 83160636 83160782 -20334192 - B1_Mus2 SINE Alu 0 147 2 4 1219 381 43 0 0 chr15 83161186 83161233 -20333741 + (TC)n Simple_repeat Simple_repeat 1 47 0 4 1219 640 242 40 66 chr15 83161240 83161466 -20333508 - ID_B1 SINE B4 0 224 5 4 1219 619 252 0 33 chr15 83161503 83161655 -20333319 - B1_Mur1 SINE Alu -2 147 1 4 1219 226 297 36 78 chr15 83162204 83162423 -20332551 - L1MC4 LINE L1 -1058 6984 6775 4 1219 848 215 5 30 chr15 83162425 83162622 -20332352 + B3A SINE B2 1 192 -6 4 1219 687 167 122 75 chr15 83162901 83163089 -20331885 + B3A SINE B2 2 198 0 4 1219 274 345 110 23 chr15 83163427 83163735 -20331239 - MER82 DNA MER2_type -21 632 298 4 1219 366 286 9 19 chr15 83163939 83164046 -20330928 - B1F2 SINE Alu -33 116 11 4 1219 230 214 64 106 chr15 83164058 83164152 -20330822 - PB1D10 SINE Alu 0 117 28 4 1219 250 304 31 61 chr15 83164183 83164281 -20330693 - MER82 DNA MER2_type -459 194 100 4 1219 630 241 35 0 chr15 83165198 83165339 -20329635 + RSINE1 SINE B4 3 148 -17 4 1219 388 279 0 0 chr15 83165474 83165578 -20329396 - RSINE1 SINE B4 -28 137 34 4 1219 197 122 0 47 chr15 83165858 83165901 -20329073 + CT-rich Low_complexity Low_complexity 3 43 0 4 1219 909 107 0 8 chr15 83165922 83166054 -20328920 - B1_Mus2 SINE Alu -16 131 1 4 1219 1384 65 16 5 chr15 83166235 83166421 -20328553 + B2_Mm2 SINE B2 2 189 -6 4 1219 606 190 28 55 chr15 83166477 83166622 -20328352 - B1F2 SINE Alu 0 149 9 4 1219 437 339 49 38 chr15 83166748 83167012 -20327962 - Lx8 LINE L1 -1 7472 7206 4 1219 959 87 53 116 chr15 83167237 83167444 -20327530 + B2_Mm2 SINE B2 2 195 0 4 1219 652 253 223 0 chr15 83167640 83167806 -20327168 - B3 SINE B2 -13 203 1 4 1219 491 234 72 41 chr15 83167806 83167987 -20326987 - B3A SINE B2 -1 194 1 4 1219 365 156 11 154 chr15 83168750 83168841 -20326133 - B1_Mur1 SINE Alu -29 120 39 4 1219 517 221 94 51 chr15 83169203 83169341 -20325633 + B1F SINE Alu 5 148 0 4 1219 21 0 0 0 chr15 83169451 83169472 -20325502 + GC_rich Low_complexity Low_complexity 1 21 0 4 1219 261 203 12 48 chr15 83169496 83169518 -20325456 + L1M4 LINE L1 4971 4992 -1154 4 1219 934 168 0 26 chr15 83169518 83169671 -20325303 + B1_Mur2 SINE Alu 1 149 0 4 1219 261 211 14 47 chr15 83169671 83169746 -20325228 + L1M4 LINE L1 4987 5060 -1080 4 1219 898 143 0 0 chr15 83169855 83169988 -20324986 + B1_Mus2 SINE Alu 9 141 -6 4 1219 835 41 16 16 chr15 83170031 83170155 -20324819 + (GAAA)n Simple_repeat Simple_repeat 1 124 0 4 1219 291 252 49 25 chr15 83170156 83170278 -20324696 + L1M4 LINE L1 5196 5320 -826 4 1219 243 223 105 0 chr15 83170291 83170388 -20324586 + L1M4 LINE L1 5362 5469 -711 4 1219 726 34 0 0 chr15 83170402 83170491 -20324483 + (GGGA)n Simple_repeat Simple_repeat 1 89 0 4 1219 292 338 0 0 chr15 83170495 83170575 -20324399 + ID4_ SINE ID 3 82 -1 4 1219 392 146 39 0 chr15 83170580 83170683 -20324291 + GA-rich Low_complexity Low_complexity 2 108 0 4 1219 410 356 39 14 chr15 83170712 83170991 -20323983 + L1M4 LINE L1 5539 5824 -347 4 1219 909 240 129 18 chr15 83171121 83171393 -20323581 + ORR1E LTR MaLR 45 346 -13 4 1219 943 162 0 7 chr15 83171435 83171584 -20323390 + B1_Mur4 SINE Alu 1 148 -2 4 1219 408 40 0 0 chr15 83171584 83171634 -20323340 + (TAA)n Simple_repeat Simple_repeat 2 51 0 4 1219 596 239 107 30 chr15 83171806 83171974 -20323000 + B3A SINE B2 2 182 -16 4 1219 218 182 0 0 chr15 83171974 83172018 -20322956 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1219 446 216 127 63 chr15 83172960 83173118 -20321856 - B2_Mm2 SINE B2 -5 190 23 4 1219 881 249 184 3 chr15 83173122 83173404 -20321570 + MTEa LTR MaLR 4 336 -43 4 1219 693 268 160 46 chr15 83173704 83173966 -20321008 + B4 SINE B4 1 292 0 4 1219 491 45 15 0 chr15 83174407 83174473 -20320501 - B1_Mm SINE Alu 0 147 81 4 1219 310 305 77 21 chr15 83174472 83174630 -20320344 + MLT1F LTR MaLR 135 321 -248 4 1219 656 233 41 7 chr15 83175081 83175228 -20319746 + RSINE1 SINE B4 3 154 -11 4 1219 220 325 168 16 chr15 83176230 83176246 -20318728 + B1_Mur1 SINE Alu 6 144 0 4 1219 479 279 0 0 chr15 83176246 83176350 -20318624 + ID_B1 SINE B4 118 221 -3 4 1219 841 245 20 55 chr15 83176436 83176635 -20318339 - B3 SINE B2 -21 195 4 4 1219 626 233 82 16 chr15 83176651 83176834 -20318140 - B3A SINE B2 -2 196 2 4 1219 187 330 56 22 chr15 83176857 83176947 -20318027 + MIRm SINE MIR 159 251 -25 4 1219 368 302 19 9 chr15 83177139 83177246 -20317728 - ID_B1 SINE B4 -10 214 107 4 1219 217 265 70 42 chr15 83177366 83177437 -20317537 - PB1D10 SINE Alu 0 117 45 4 1219 227 169 71 157 chr15 83177403 83177473 -20317501 - B1F SINE Alu -69 80 17 4 1219 603 225 39 8 chr15 83177496 83177626 -20317348 + B1F SINE Alu 16 149 0 4 1219 599 133 9 0 chr15 83177626 83177731 -20317243 + (GAAAA)n Simple_repeat Simple_repeat 3 108 0 4 1219 340 293 13 0 chr15 83177735 83177810 -20317164 + ID4_ SINE ID 2 77 -6 4 1219 901 148 0 39 chr15 83177869 83178024 -20316950 + B1_Mur3 SINE Alu 1 149 0 4 1219 1219 97 34 0 chr15 83178157 83178332 -20316642 + B2_Mm2 SINE B2 7 187 -8 4 1219 389 329 0 33 chr15 83178449 83178600 -20316374 - B1F SINE Alu -3 146 1 4 1219 612 254 7 7 chr15 83178623 83178762 -20316212 - ID_B1 SINE B4 0 224 86 4 1219 437 229 66 9 chr15 83181135 83181241 -20313733 - B1F SINE Alu -32 117 6 4 1219 381 293 17 25 chr15 83181241 83181254 -20313720 - ID_B1 SINE B4 -29 195 78 4 1219 2088 142 154 13 chr15 83181714 83182163 -20312811 - RLTR28 LTR ERVL -3 521 10 4 1219 24 0 0 0 chr15 83182294 83182318 -20312656 + AT_rich Low_complexity Low_complexity 1 24 0 4 1219 585 281 0 8 chr15 83182353 83182475 -20312499 + ID_B1 SINE B4 87 207 -17 4 1219 268 251 197 7 chr15 83182978 83183101 -20311873 + B3 SINE B2 48 194 -4 4 1219 399 250 119 51 chr15 83183194 83183345 -20311629 + B2_Mm2 SINE B2 6 174 -21 4 1219 444 37 0 0 chr15 83183345 83183399 -20311575 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1219 399 250 119 51 chr15 83183399 83183424 -20311550 + B2_Mm2 SINE B2 175 194 -1 4 1219 310 202 94 12 chr15 83183460 83183545 -20311429 + L1MCc LINE L1 74 165 -6258 4 1219 1007 135 0 0 chr15 83183807 83183948 -20311026 + B1_Mur3 SINE Alu 4 144 -5 4 1219 212 0 36 0 chr15 83183950 83183978 -20310996 + (CAA)n Simple_repeat Simple_repeat 2 30 0 4 1219 213 119 0 0 chr15 83184175 83184217 -20310757 + (CATA)n Simple_repeat Simple_repeat 1 42 0 4 1219 240 238 95 0 chr15 83184248 83184311 -20310663 - MTEa LTR MaLR -18 361 293 4 1219 649 207 59 7 chr15 83185520 83185656 -20309318 - B1F SINE Alu -6 143 1 4 1219 363 306 57 49 chr15 83186572 83186799 -20308175 + MIRb SINE MIR 16 250 -12 4 1219 204 276 17 17 chr15 83186849 83186908 -20308066 + L2b LINE L2 3113 3171 -204 4 1219 798 137 291 0 chr15 83189666 83189841 -20305133 - URR1A DNA MER1_type 0 226 1 4 1219 236 287 62 108 chr15 83192406 83192535 -20302439 + MTEb LTR MaLR 249 371 -8 4 1219 268 245 59 6 chr15 83192995 83193102 -20301872 + B1F1 SINE Alu 1 147 0 4 1219 531 298 21 68 chr15 83193972 83194163 -20300811 - B3A SINE B2 -16 182 1 4 1219 458 287 85 0 chr15 83195331 83195460 -20299514 - B1F SINE Alu 0 149 10 4 1219 921 204 125 5 chr15 83195996 83196188 -20298786 - B3 SINE B2 0 216 2 4 1219 763 166 210 6 chr15 83196223 83196399 -20298575 + B3 SINE B2 1 212 -4 4 1219 226 343 15 0 chr15 83196802 83196869 -20298105 + MLT1F1 LTR MaLR 109 176 -393 4 1219 463 182 252 9 chr15 83196871 83196982 -20297992 + B1_Mur4 SINE Alu 1 138 -12 4 1219 342 0 0 0 chr15 83196982 83197020 -20297954 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 4 1219 421 232 22 27 chr15 83197040 83197167 -20297807 + PB1D10 SINE Alu 7 126 -21 4 1219 195 42 0 0 chr15 83198059 83198083 -20296891 + (TTA)n Simple_repeat Simple_repeat 2 25 0 4 1219 565 211 121 66 chr15 83198110 83198308 -20296666 + B3 SINE B2 5 213 -3 4 1219 252 122 0 0 chr15 83198311 83198352 -20296622 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 4 1219 198 0 0 0 chr15 83198354 83198376 -20296598 + (GA)n Simple_repeat Simple_repeat 1 22 0 4 1219 536 263 26 0 chr15 83198379 83198493 -20296481 - ID_B1 SINE B4 -18 206 90 4 1219 352 205 0 57 chr15 83198497 83198585 -20296389 - RMER21B LTR ERV1 -8 834 752 4 1219 233 274 118 12 chr15 83198636 83198721 -20296253 - B3A SINE B2 -104 94 1 4 1219 328 271 74 9 chr15 83199020 83199128 -20295846 - L1MEg LINE L1 -4128 1956 1842 4 1219 222 37 0 0 chr15 83199128 83199155 -20295819 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 4 1219 1215 62 0 0 chr15 83199155 83199301 -20295673 - B1_Mus2 SINE Alu -1 146 1 4 1219 1343 106 37 0 chr15 83199304 83199492 -20295482 - B2_Mm2 SINE B2 0 195 1 4 1219 921 106 27 27 chr15 83200303 83200449 -20294525 + B1_Mus1 SINE Alu 3 148 0 4 1219 881 304 13 17 chr15 83200622 83200856 -20294118 - B4A SINE B4 -59 233 1 4 1219 1209 84 24 6 chr15 83201010 83201177 -20293797 + B2_Mm1t SINE B2 2 171 -22 4 1219 374 103 68 2 chr15 83201210 83201313 -20293661 + B2_Mm2 SINE B2 48 193 -2 4 1219 366 336 29 9 chr15 83201417 83201522 -20293452 - B4A SINE B4 0 292 186 4 1219 488 98 143 24 chr15 83201569 83201653 -20293321 - B3 SINE B2 -122 94 1 4 1219 2755 78 13 24 chr15 83201716 83202096 -20292878 - MTB LTR MaLR 0 400 25 5 1219 257 180 16 16 chr15 83202207 83202269 -20292705 + L1MC3 LINE L1 5896 5957 -1828 5 1219 427 259 9 10 chr15 83202276 83202387 -20292587 + B1F SINE Alu 1 117 -3 5 1219 593 181 155 0 chr15 83202544 83202660 -20292314 - B1_Mur2 SINE Alu -13 136 3 5 1219 413 321 134 0 chr15 83202738 83202947 -20292027 + MIR SINE MIR 1 237 -25 5 1219 222 291 25 12 chr15 83202949 83203029 -20291945 - MIRm SINE MIR -43 165 85 5 1219 246 301 7 0 chr15 83204062 83204143 -20290831 + L2b LINE L2 3293 3374 -13 5 1219 203 279 91 83 chr15 83204183 83204304 -20290670 + MIR SINE MIR 32 153 -55 5 1219 1276 189 36 139 chr15 83204624 83204904 -20290070 + RMER16 LTR ERVK 1 351 -182 5 1219 1171 51 0 0 chr15 83204904 83205041 -20289933 - B1_Mm SINE Alu -9 138 2 5 1219 1276 188 40 148 chr15 83205041 83205218 -20289756 + RMER16 LTR ERVK 352 533 0 5 1219 585 0 0 0 chr15 83206070 83206135 -20288839 + (CAG)n Simple_repeat Simple_repeat 2 66 0 5 1219 306 0 0 0 chr15 83206875 83206909 -20288065 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1219 1362 161 4 18 chr15 83210840 83211068 -20283906 + URR1B DNA MER1_type 1 225 0 5 1219 300 221 28 42 chr15 83211717 83211788 -20283186 - ID2 SINE ID -10 73 4 5 1219 428 250 0 0 chr15 83212562 83212642 -20282332 + ID4_ SINE ID 2 81 -2 5 1219 1326 81 40 6 chr15 83212785 83212959 -20282015 - B2_Mm2 SINE B2 -14 181 2 5 1219 805 124 122 14 chr15 83213122 83213269 -20281705 + BGLII_B LTR ERVK 279 441 0 5 1219 329 292 31 55 chr15 83213432 83213559 -20281415 + RSINE1 SINE B4 7 130 -35 5 1219 208 336 101 20 chr15 83214618 83214767 -20280207 - MIRb SINE MIR -73 195 35 5 1219 239 261 171 0 chr15 83216256 83216344 -20278630 + MLT1C LTR MaLR 352 454 -13 5 1219 218 357 14 0 chr15 83216490 83216560 -20278414 + MIRb SINE MIR 125 195 -73 5 1219 307 109 69 52 chr15 83219590 83219648 -20275326 + B1_Mus2 SINE Alu 76 134 -13 5 1219 228 67 0 0 chr15 83219648 83219678 -20275296 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 5 1219 1435 152 4 4 chr15 83219813 83220038 -20274936 - URR1B DNA MER1_type 0 225 1 5 1219 561 305 86 6 chr15 83221351 83221526 -20273448 - B4A SINE B4 -18 274 86 5 1219 236 53 26 0 chr15 83221526 83221564 -20273410 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1219 1192 37 0 0 chr15 83221564 83221699 -20273275 - B1_Mus2 SINE Alu -11 136 2 5 1219 803 240 52 42 chr15 83221722 83221935 -20273039 - B3 SINE B2 0 216 2 5 1219 524 242 153 7 chr15 83223347 83223497 -20271477 + B3A SINE B2 1 172 -26 5 1219 189 147 0 0 chr15 83223499 83223533 -20271441 + (CCTA)n Simple_repeat Simple_repeat 3 36 0 5 1219 258 213 0 0 chr15 83225410 83225457 -20269517 - MIRm SINE MIR -11 265 219 5 1219 1700 156 52 0 chr15 83225965 83226254 -20268720 - MTC LTR MaLR -8 413 110 5 1219 23 0 0 0 chr15 83227055 83227078 -20267896 + AT_rich Low_complexity Low_complexity 1 23 0 5 1219 218 271 86 86 chr15 83227971 83228088 -20266886 + L3 LINE CR1 4230 4346 -143 5 1219 180 0 0 0 chr15 83228192 83228212 -20266762 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1219 2516 114 123 5 chr15 83228462 83228883 -20266091 - RMER4B LTR ERVK -113 472 2 5 1219 588 113 29 58 chr15 83229923 83230026 -20264948 - MTC LTR MaLR -321 100 1 5 1220 228 278 40 80 chr15 83231197 83231322 -20263652 - MLT2F LTR ERVL -236 427 308 5 1220 358 294 62 20 chr15 83231428 83231574 -20263400 - MIRc SINE MIR -113 155 4 5 1220 231 299 0 15 chr15 83231653 83231721 -20263253 + tRNA-Ala-GCY_ tRNA tRNA 9 75 0 5 1220 1337 208 254 68 chr15 83232747 83232828 -20262146 + MT2A LTR ERVL 5 84 -449 5 1220 751 193 0 82 chr15 83232828 83232986 -20261988 - B1_Mus2 SINE Alu 0 147 3 5 1220 1337 208 254 68 chr15 83232986 83233348 -20261626 + MT2A LTR ERVL 85 531 -2 5 1220 690 168 128 0 chr15 83233842 83233967 -20261007 + B1_Mus1 SINE Alu 3 143 -5 5 1220 498 33 0 0 chr15 83234816 83234876 -20260098 + (TCCA)n Simple_repeat Simple_repeat 1 60 0 5 1220 398 270 43 17 chr15 83234960 83235077 -20259897 + PB1 SINE Alu 1 120 -7 5 1220 1143 136 62 53 chr15 83235240 83235449 -20259525 + B3 SINE B2 2 212 -4 5 1220 25 0 0 0 chr15 83235460 83235485 -20259489 + AT_rich Low_complexity Low_complexity 1 25 0 5 1220 255 169 0 31 chr15 83236545 83236643 -20258331 + (CCG)n Simple_repeat Simple_repeat 2 96 0 5 1220 905 214 52 43 chr15 83236714 83236923 -20258051 + ORR1D1 LTR MaLR 1 211 -163 5 1220 577 219 58 8 chr15 83236923 83237043 -20257931 + B1_Mur2 SINE Alu 1 126 -23 5 1220 242 261 29 14 chr15 83237877 83237947 -20257027 + ORR1D1 LTR MaLR 294 364 -15 5 1220 1307 218 92 22 chr15 83238717 83239031 -20255943 - MTEb LTR MaLR -37 342 7 5 1220 228 317 12 35 chr15 83239039 83239124 -20255850 + B4 SINE B4 70 152 -140 5 1220 496 235 33 25 chr15 83239063 83239185 -20255789 + B1F SINE Alu 10 132 -17 5 1220 191 254 0 35 chr15 83239880 83239937 -20255037 - L2a LINE L2 -67 3359 3305 5 1220 721 188 49 103 chr15 83240298 83240482 -20254492 + B3A SINE B2 25 198 0 5 1220 742 177 40 0 chr15 83241531 83241655 -20253319 - B1_Mur2 SINE Alu -15 134 6 5 1220 889 130 26 46 chr15 83242697 83242850 -20252124 + B1_Mur4 SINE Alu 1 150 0 5 1220 234 0 0 0 chr15 83242858 83242884 -20252090 + (CCAA)n Simple_repeat Simple_repeat 1 26 0 5 1220 773 237 25 40 chr15 83243703 83243901 -20251073 + B3 SINE B2 1 195 -21 5 1220 543 277 36 7 chr15 83244130 83244268 -20250706 - B1F SINE Alu -1 148 7 5 1220 765 204 14 0 chr15 83244266 83244408 -20250566 + B3 SINE B2 71 214 -2 5 1220 645 256 61 28 chr15 83244496 83244677 -20250297 - B3 SINE B2 -27 189 3 5 1220 634 191 98 8 chr15 83244822 83244954 -20250020 + B1_Mus2 SINE Alu 4 147 0 5 1220 3635 194 91 10 chr15 83246157 83246410 -20248564 - L1_Mur3 LINE L1 -2427 3453 3195 5 1220 1731 16 0 0 chr15 83246410 83246601 -20248373 + B2_Mm1a SINE B2 2 192 -1 5 1220 3635 194 91 10 chr15 83246601 83247272 -20247702 - L1_Mur3 LINE L1 -2686 3194 2456 5 1220 232 109 73 0 chr15 83247291 83247346 -20247628 - L1_Mur3 LINE L1 -1679 4201 4143 5 1220 416 239 48 88 chr15 83247517 83247664 -20247310 + B1F SINE Alu 4 144 -5 5 1220 265 274 63 49 chr15 83250270 83250412 -20244562 + MIRc SINE MIR 32 175 -93 5 1220 1062 46 0 23 chr15 83250595 83250721 -20244253 + L1_Mm LINE L1 5462 5586 -297 5 1220 7966 35 30 7 chr15 83250721 83250879 -20244095 + L1Md_F2 LINE L1 5588 5748 -834 5 1220 3742 32 0 29 chr15 83250879 83251328 -20243646 + RLTR10C LTR ERVK 1 436 0 5 1220 7966 35 30 7 chr15 83251328 83252142 -20242832 + L1Md_F2 LINE L1 5749 6582 0 5 1220 254 266 78 0 chr15 83252339 83252403 -20242571 + ID4_ SINE ID 6 74 -9 5 1220 355 269 154 12 chr15 83252511 83252846 -20242128 - L1ME2 LINE L1 -27 6151 5767 5 1220 283 306 51 17 chr15 83253495 83253671 -20241303 + L1M4 LINE L1 5569 5750 -428 5 1220 436 271 169 6 chr15 83254954 83255132 -20239842 + B3 SINE B2 3 209 -7 5 1220 1305 99 28 0 chr15 83255152 83255333 -20239641 + B2_Mm1a SINE B2 1 186 -7 5 1220 509 246 73 0 chr15 83255344 83255454 -20239520 + B3A SINE B2 2 119 -79 5 1220 803 185 7 29 chr15 83255526 83255665 -20239309 + B1_Mur3 SINE Alu 1 136 -13 5 1220 616 50 20 20 chr15 83256212 83256313 -20238661 + (CAGAGA)n Simple_repeat Simple_repeat 2 102 0 5 1220 228 135 0 0 chr15 83257608 83257645 -20237329 + (GGGA)n Simple_repeat Simple_repeat 4 40 0 5 1220 547 254 25 0 chr15 83257966 83258084 -20236890 + B3 SINE B2 66 186 -30 5 1220 411 245 135 34 chr15 83258083 83258231 -20236743 - B2_Mm2 SINE B2 -30 165 3 5 1220 434 174 105 67 chr15 83258248 83258353 -20236621 - B1_Mur1 SINE Alu 0 149 41 5 1220 264 239 0 43 chr15 83258295 83258365 -20236609 - 4.5SRNA scRNA scRNA -1 93 27 5 1220 247 210 145 0 chr15 83258379 83258441 -20236533 + ID4 SINE ID 2 72 -11 5 1220 390 66 180 0 chr15 83258571 83258632 -20236342 + BC1_Mm scRNA scRNA 1 72 -80 5 1220 219 69 0 0 chr15 83258652 83258681 -20236293 + (GGAA)n Simple_repeat Simple_repeat 1 29 0 5 1220 1016 201 0 48 chr15 83259070 83259279 -20235695 + B3 SINE B2 1 199 -17 5 1220 195 42 0 0 chr15 83259283 83259307 -20235667 + (GGGA)n Simple_repeat Simple_repeat 2 25 0 5 1220 239 290 37 98 chr15 83260091 83260305 -20234669 + RMER10A LTR ERVL 218 418 -24 5 1220 718 131 8 50 chr15 83260318 83260439 -20234535 - B1_Mur2 SINE Alu -22 127 12 5 1220 438 268 19 78 chr15 83260322 83260476 -20234498 - ID_B1 SINE B4 -23 201 57 5 1220 349 252 76 39 chr15 83261486 83261614 -20233360 + MIRb SINE MIR 2 150 -118 5 1220 1301 34 0 0 chr15 83262206 83262353 -20232621 - B1_Mm SINE Alu 0 147 1 5 1220 319 185 0 18 chr15 83264247 83264302 -20230672 + RSINE1 SINE B4 10 63 -102 5 1220 232 261 88 33 chr15 83264740 83264831 -20230143 - MLT1G LTR MaLR -215 376 281 5 1220 911 119 271 0 chr15 83264928 83265105 -20229869 + URR1B DNA MER1_type 1 225 0 5 1220 957 304 40 4 chr15 83266154 83266201 -20228773 - B4 SINE B4 -4 288 239 5 1220 638 234 14 14 chr15 83266201 83266344 -20228630 - B1_Mur1 SINE Alu -5 144 2 5 1220 957 304 40 4 chr15 83266344 83266573 -20228401 - B4 SINE B4 -54 238 3 5 1220 928 206 262 7 chr15 83267162 83267464 -20227510 - MTEb LTR MaLR 0 379 1 5 1220 225 383 49 55 chr15 83267539 83267702 -20227272 - L2b LINE L2 -96 3279 3118 6 1220 602 290 19 0 chr15 83267884 83268039 -20226935 + RSINE1 SINE B4 3 160 -5 6 1220 1681 204 49 19 chr15 83268083 83268448 -20226526 + RMER10B LTR ERVL 1 376 -22 6 1220 28 0 0 0 chr15 83268448 83268476 -20226498 + AT_rich Low_complexity Low_complexity 1 28 0 6 1220 700 103 61 61 chr15 83268619 83268733 -20226241 + B2_Mm2 SINE B2 2 115 -80 6 1220 336 48 0 0 chr15 83268764 83268806 -20226168 + (GA)n Simple_repeat Simple_repeat 2 43 0 6 1220 494 261 65 56 chr15 83269189 83269420 -20225554 + RLTR12B LTR ERVK 80 312 -216 6 1220 257 280 13 13 chr15 83270396 83270472 -20224502 + ID4_ SINE ID 2 77 -6 6 1220 1087 137 94 38 chr15 83272041 83272254 -20222720 - URR1B DNA MER1_type 0 225 1 6 1220 454 271 40 40 chr15 83272477 83272603 -20222371 + B4A SINE B4 128 248 -44 6 1220 333 68 0 0 chr15 83272603 83272647 -20222327 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1220 454 271 40 40 chr15 83272647 83272670 -20222304 + B4A SINE B4 249 277 -15 6 1220 195 289 136 57 chr15 83273526 83273614 -20221360 - L2b LINE L2 -258 3117 3023 6 1220 197 310 54 54 chr15 83273647 83273739 -20221235 + L2 LINE L2 2772 2863 -556 6 1220 249 274 11 109 chr15 83273921 83273993 -20220981 + MIRb SINE MIR 29 98 -170 6 1220 535 240 128 22 chr15 83273993 83274172 -20220802 - B3A SINE B2 0 198 1 6 1220 249 267 12 107 chr15 83274172 83274203 -20220771 + MIRb SINE MIR 99 128 -140 6 1220 355 330 26 0 chr15 83275301 83275416 -20219558 + RSINE1 SINE B4 48 165 0 6 1220 423 307 7 62 chr15 83275530 83275676 -20219298 + B1F SINE Alu 1 138 -11 6 1220 218 260 20 0 chr15 83275685 83275735 -20219239 + GA-rich Low_complexity Low_complexity 6 56 0 6 1220 180 0 0 0 chr15 83275758 83275778 -20219196 + (A)n Simple_repeat Simple_repeat 1 20 0 6 1220 232 254 164 0 chr15 83277063 83277173 -20217801 + L1M2 LINE L1 4961 5088 -1055 6 1220 416 170 250 0 chr15 83277515 83277615 -20217359 + ID_B1 SINE B4 97 221 -3 6 1220 234 62 0 0 chr15 83277665 83277697 -20217277 + (TC)n Simple_repeat Simple_repeat 2 33 0 6 1220 570 194 139 0 chr15 83277698 83277827 -20217147 - B1_Mm SINE Alu 0 147 1 6 1220 314 274 0 40 chr15 83278028 83278104 -20216870 + polypurine Low_complexity Low_complexity 4 76 0 6 1220 287 257 29 0 chr15 83278943 83279013 -20215961 + PB1D7 SINE Alu 6 77 -43 6 1220 763 184 72 59 chr15 83279394 83279694 -20215280 + RMER10A LTR ERVL 1 305 -93 6 1220 1596 137 73 104 chr15 83279703 83279769 -20215205 - ORR1B1 LTR MaLR -8 386 349 6 1220 1127 28 0 47 chr15 83279769 83279919 -20215055 - B1_Mm SINE Alu 0 147 5 6 1220 1596 137 73 104 chr15 83279919 83280209 -20214765 - ORR1B1 LTR MaLR -46 348 41 6 1220 283 224 17 0 chr15 83280218 83280276 -20214698 + RMER10A LTR ERVL 308 366 -32 6 1220 319 229 56 103 chr15 83280426 83280533 -20214441 + RMER30 DNA MER1_type 100 201 -1 6 1220 810 250 0 11 chr15 83280742 83280920 -20214054 + B3A SINE B2 7 182 -16 6 1220 369 43 0 0 chr15 83280937 83280984 -20213990 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1220 247 204 0 0 chr15 83281603 83281647 -20213327 + RSINE1 SINE B4 17 60 -105 6 1220 324 0 0 0 chr15 83283242 83283278 -20211696 + (TCCC)n Simple_repeat Simple_repeat 2 37 0 6 1220 226 118 0 56 chr15 83283631 83283685 -20211289 + GA-rich Low_complexity Low_complexity 5 55 0 6 1220 386 312 60 54 chr15 83284022 83284171 -20210803 + RSINE1 SINE B4 16 165 0 6 1220 24 0 0 0 chr15 83284181 83284205 -20210769 + AT_rich Low_complexity Low_complexity 1 24 0 6 1220 244 274 94 0 chr15 83284255 83284361 -20210613 + PB1D10 SINE Alu 1 116 -1 6 1220 1184 58 127 0 chr15 83285667 83285840 -20209134 + B2_Mm2 SINE B2 1 195 0 6 1220 1095 61 0 33 chr15 83285845 83285997 -20208977 + B1_Mus1 SINE Alu 1 147 -1 6 1220 550 143 214 0 chr15 83286321 83286433 -20208541 - B1_Mus1 SINE Alu -1 147 12 6 1220 441 169 0 0 chr15 83286503 83286574 -20208400 + B3 SINE B2 60 130 -86 6 1220 750 253 111 36 chr15 83286901 83287208 -20207766 + MLT1A0 LTR MaLR 24 353 -12 6 1220 976 156 196 0 chr15 83287226 83287405 -20207569 + B3 SINE B2 3 216 0 6 1220 801 144 64 14 chr15 83288017 83288158 -20206816 - B1_Mus1 SINE Alu 0 148 1 6 1220 542 211 115 36 chr15 83288612 83288804 -20206170 + B3 SINE B2 10 216 0 6 1220 264 359 39 0 chr15 83288815 83288918 -20206056 + RSINE1 SINE B4 12 118 -47 6 1220 1019 65 65 0 chr15 83288920 83289059 -20205915 + B1_Mus1 SINE Alu 1 148 0 6 1220 270 0 0 0 chr15 83289115 83289145 -20205829 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1220 275 221 221 0 chr15 83289166 83289261 -20205713 + PB1D9 SINE Alu 5 120 0 6 1220 219 354 0 68 chr15 83289279 83289382 -20205592 + B3A SINE B2 27 122 -76 6 1220 322 242 100 10 chr15 83289653 83289753 -20205221 + B4A SINE B4 1 109 -183 6 1220 773 232 30 40 chr15 83289747 83289949 -20205025 + B3 SINE B2 13 212 -4 6 1220 298 252 101 11 chr15 83290035 83290127 -20204847 + PB1D7 SINE Alu 15 114 -6 6 1220 488 59 0 14 chr15 83290269 83290338 -20204636 + (TG)n Simple_repeat Simple_repeat 1 68 0 6 1220 585 259 0 61 chr15 83290338 83290486 -20204488 - RSINE1 SINE B4 -16 149 11 6 1220 920 100 15 0 chr15 83290518 83290648 -20204326 - B1_Mur4 SINE Alu -15 135 4 6 1220 568 229 14 71 chr15 83290729 83290870 -20204104 - RSINE1 SINE B4 -31 134 2 6 1220 443 251 0 21 chr15 83291101 83291218 -20203756 - B1F SINE Alu -11 109 1 6 1220 431 228 103 44 chr15 83291945 83292134 -20202840 - B3 SINE B2 0 198 9 6 1220 234 241 43 141 chr15 83292184 83292201 -20202773 - MT2B2 LTR ERVL -323 261 181 6 1220 306 274 41 0 chr15 83292201 83292274 -20202700 - B1F1 SINE Alu -59 90 15 6 1220 758 237 30 40 chr15 83292360 83292562 -20202412 - B3 SINE B2 -4 212 13 6 1220 322 242 100 10 chr15 83292556 83292656 -20202318 - B4A SINE B4 -183 109 1 6 1220 433 267 17 0 chr15 83293298 83293414 -20201560 + PB1D9 SINE Alu 2 119 -1 6 1220 26 50 0 0 chr15 83294740 83294780 -20200194 + GC_rich Low_complexity Low_complexity 1 40 0 6 1220 22 56 0 0 chr15 83294794 83294830 -20200144 + GC_rich Low_complexity Low_complexity 1 36 0 6 1220 228 179 18 18 chr15 83294996 83295053 -20199921 + (CCG)n Simple_repeat Simple_repeat 1 57 0 6 1220 665 212 64 46 chr15 83295395 83295568 -20199406 + B3 SINE B2 29 204 -12 6 1220 633 195 16 0 chr15 83295600 83295723 -20199251 + B1_Mus2 SINE Alu 1 125 -22 6 1220 433 230 14 149 chr15 83296011 83296159 -20198815 + B1F SINE Alu 12 139 -10 6 1220 353 185 15 0 chr15 83296204 83296269 -20198705 + ID_B1 SINE B4 114 179 -45 6 1220 265 242 93 21 chr15 83296269 83296301 -20198673 + B1F SINE Alu 33 136 -13 6 1220 695 234 8 0 chr15 83296279 83296407 -20198567 + ID_B1 SINE B4 84 212 -12 6 1220 939 154 0 0 chr15 83296613 83296762 -20198212 + B1_Mur2 SINE Alu 1 149 0 6 1220 398 184 113 28 chr15 83297195 83297301 -20197673 - PB1D9 SINE Alu -1 119 5 6 1220 596 271 155 20 chr15 83297335 83297520 -20197454 + B4A SINE B4 4 215 -77 6 1220 342 0 0 0 chr15 83297520 83297558 -20197416 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 6 1220 596 271 155 20 chr15 83297558 83297617 -20197357 + B4A SINE B4 216 281 -11 6 1220 441 0 0 0 chr15 83297620 83297669 -20197305 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1220 237 310 102 45 chr15 83298092 83298268 -20196706 - B2_Mm2 SINE B2 0 195 10 6 1220 612 280 13 6 chr15 83298114 83298272 -20196702 - RSINE1 SINE B4 0 165 7 6 1220 265 237 41 51 chr15 83298297 83298395 -20196579 - B1_Mur4 SINE Alu -26 124 28 6 1220 440 225 11 0 chr15 83298309 83298398 -20196576 - ID_B1 SINE B4 -30 194 105 6 1220 277 243 63 36 chr15 83298631 83298742 -20196232 + PB1D10 SINE Alu 1 114 -3 6 1220 277 266 106 0 chr15 83298744 83298838 -20196136 + PB1D10 SINE Alu 1 104 -13 6 1220 1164 54 0 0 chr15 83298841 83298988 -20195986 - B1_Mus2 SINE Alu 0 147 1 6 1220 839 174 0 13 chr15 83299016 83299167 -20195807 - B1_Mur4 SINE Alu -1 149 1 6 1220 369 0 0 0 chr15 83299188 83299229 -20195745 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1220 395 275 74 86 chr15 83300362 83300537 -20194437 + B4A SINE B4 2 174 -118 6 1220 508 126 16 25 chr15 83300540 83300662 -20194312 + (CA)n Simple_repeat Simple_repeat 2 122 0 6 1220 895 241 14 23 chr15 83300680 83300897 -20194077 + ID_B1 SINE B4 1 215 -9 6 1220 724 254 25 36 chr15 83301104 83301300 -20193674 + B3 SINE B2 17 210 -6 6 1220 476 298 94 27 chr15 83302657 83302881 -20192093 - L1MC2 LINE L1 -88 6256 6018 6 1220 426 207 0 0 chr15 83302881 83302968 -20192006 + PB1D10 SINE Alu 18 104 -13 6 1220 483 319 0 46 chr15 83303007 83303158 -20191816 + ID_B1 SINE B4 79 222 -2 6 1220 333 248 127 42 chr15 83303212 83303250 -20191724 + RSINE1 SINE B4 3 39 -126 6 1220 1855 136 35 172 chr15 83303250 83303448 -20191526 + MTC LTR MaLR 1 209 -212 6 1220 1148 54 0 13 chr15 83303448 83303597 -20191377 + B1_Mus1 SINE Alu 1 147 -1 6 1220 1855 136 35 172 chr15 83303597 83303886 -20191088 + MTC LTR MaLR 210 421 0 6 1220 333 248 127 42 chr15 83303886 83303965 -20191009 + RSINE1 SINE B4 40 130 -35 6 1220 339 25 0 0 chr15 83303981 83304021 -20190953 + (TC)n Simple_repeat Simple_repeat 1 40 0 6 1220 249 33 0 0 chr15 83304021 83304050 -20190924 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1220 932 212 27 36 chr15 83305012 83305237 -20189737 + MTC LTR MaLR 133 355 -66 6 1220 1023 51 72 0 chr15 83305584 83305722 -20189252 - B1_Mus1 SINE Alu 0 148 1 7 1220 229 190 0 65 chr15 83305804 83305866 -20189108 + A-rich Low_complexity Low_complexity 2 59 0 7 1220 210 308 81 81 chr15 83305962 83306061 -20188913 - ID_B1 SINE B4 -43 181 83 7 1220 213 65 0 0 chr15 83306141 83306172 -20188802 + (C)n Simple_repeat Simple_repeat 1 31 0 7 1220 690 248 4 136 chr15 83306678 83306935 -20188039 + B4 SINE B4 1 223 -69 7 1220 494 262 24 24 chr15 83306944 83307108 -20187866 + RSINE1 SINE B4 2 165 0 7 1220 261 318 73 18 chr15 83307245 83307354 -20187620 - MIRm SINE MIR -112 164 50 7 1220 859 191 33 66 chr15 83308350 83308563 -20186411 + B3 SINE B2 1 206 -10 7 1220 387 0 0 0 chr15 83308817 83308860 -20186114 + (CAGGA)n Simple_repeat Simple_repeat 2 44 0 7 1220 243 0 0 0 chr15 83309846 83309873 -20185101 + (TTG)n Simple_repeat Simple_repeat 2 28 0 7 1220 450 181 0 211 chr15 83309936 83310069 -20184905 + B1_Mm SINE Alu 1 105 -42 7 1220 776 129 23 0 chr15 83310069 83310201 -20184773 - B1_Mus1 SINE Alu -13 135 1 7 1220 1962 161 14 14 chr15 83310246 83310599 -20184375 - ORR1B1 LTR MaLR -1 393 41 7 1220 515 262 32 0 chr15 83311958 83312084 -20182890 - B1F SINE Alu -9 140 11 7 1220 183 100 0 0 chr15 83312339 83312369 -20182605 + (TGGGGG)n Simple_repeat Simple_repeat 4 33 0 7 1220 530 113 97 0 chr15 83312908 83313032 -20181942 + (CTAGGG)n Simple_repeat Simple_repeat 1 136 0 7 1220 526 135 302 67 chr15 83313068 83313187 -20181787 + B1_Mus1 SINE Alu 2 148 0 7 1220 1064 95 0 0 chr15 83313596 83313743 -20181231 + B1_Mus1 SINE Alu 2 148 0 7 1220 384 174 0 0 chr15 83313743 83313835 -20181139 + (TAGA)n Simple_repeat Simple_repeat 1 92 0 7 1220 558 125 34 27 chr15 83313849 83313997 -20180977 + GA-rich Low_complexity Low_complexity 2 150 0 7 1220 475 235 155 12 chr15 83314024 83314192 -20180782 + B3A SINE B2 1 192 -6 7 1220 860 124 80 7 chr15 83314192 83314329 -20180645 + B1_Mur1 SINE Alu 1 148 -1 7 1220 351 150 0 0 chr15 83314374 83314434 -20180540 + (CGTG)n Simple_repeat Simple_repeat 4 63 0 7 1220 1023 128 6 0 chr15 83315045 83315201 -20179773 + B2_Mm2 SINE B2 1 157 -38 7 1220 238 65 84 32 chr15 83315230 83315325 -20179649 + (TA)n Simple_repeat Simple_repeat 2 101 0 7 1220 62 44 0 0 chr15 83315326 83315416 -20179558 + AT_rich Low_complexity Low_complexity 1 90 0 7 1220 640 246 0 0 chr15 83315856 83315982 -20178992 - RSINE1 SINE B4 -36 129 4 7 1220 1733 160 73 18 chr15 83315982 83316325 -20178649 + RMER12B LTR ERVK 1 362 -1042 7 1220 1068 175 129 10 chr15 83316344 83316638 -20178336 + RMER17C LTR ERVK 82 410 0 7 1220 3289 99 69 34 chr15 83316638 83317216 -20177758 + RMER12 LTR ERVK 290 888 -434 7 1220 246 32 0 0 chr15 83317216 83317247 -20177727 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 1220 667 154 15 23 chr15 83317299 83317432 -20177542 + RMER12 LTR ERVK 1191 1322 0 7 1220 491 284 97 0 chr15 83317484 83317618 -20177356 - RSINE1 SINE B4 -16 149 3 7 1220 634 205 8 8 chr15 83317618 83317746 -20177228 - B1_Mur3 SINE Alu -21 128 1 7 1220 709 142 18 0 chr15 83317774 83317887 -20177087 + B1_Mur3 SINE Alu 1 115 -34 7 1220 306 0 0 0 chr15 83318450 83318484 -20176490 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1220 294 290 0 61 chr15 83318874 83318887 -20176087 + B4A SINE B4 75 81 -211 7 1220 543 231 25 89 chr15 83318887 83319044 -20175930 + B1_Mur1 SINE Alu 3 149 0 7 1220 1098 68 7 0 chr15 83319111 83319258 -20175716 - B1_Mus1 SINE Alu 0 148 1 7 1220 382 301 23 161 chr15 83320249 83320318 -20174656 + MTC LTR MaLR 60 123 -296 7 1220 1368 73 21 5 chr15 83320318 83320510 -20174464 - B2_Mm2 SINE B2 0 195 1 7 1220 382 301 23 161 chr15 83320510 83320544 -20174430 + MTC LTR MaLR 124 137 -282 7 1220 770 261 0 6 chr15 83320544 83320710 -20174264 - RSINE1 SINE B4 0 165 1 7 1220 455 282 111 5 chr15 83320710 83320882 -20174092 + MTC LTR MaLR 117 286 -114 7 1220 378 100 0 0 chr15 83320917 83320977 -20173997 + (TG)n Simple_repeat Simple_repeat 1 60 0 7 1220 432 56 14 27 chr15 83320977 83321051 -20173923 + (GA)n Simple_repeat Simple_repeat 2 74 0 7 1220 258 241 0 17 chr15 83321132 83321191 -20173783 + PB1D10 SINE Alu 20 77 -40 7 1220 211 211 0 0 chr15 83321198 83321236 -20173738 + GA-rich Low_complexity Low_complexity 3 40 0 7 1220 1376 61 0 11 chr15 83322065 83322247 -20172727 + B2_Mm2 SINE B2 2 181 -14 7 1220 509 41 0 0 chr15 83322291 83322364 -20172610 - L1Md_F3 LINE L1 -14 6570 6498 7 1220 984 240 69 69 chr15 83322428 83322702 -20172272 + MTEa LTR MaLR 50 333 -46 7 1220 243 0 0 0 chr15 83322702 83322729 -20172245 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1220 984 240 69 69 chr15 83322729 83322758 -20172216 + MTEa LTR MaLR 334 353 -26 7 1220 549 261 0 0 chr15 83323161 83323341 -20171633 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 1220 210 305 0 0 chr15 83323365 83323460 -20171514 + (CA)n Simple_repeat Simple_repeat 1 95 0 7 1220 657 222 62 34 chr15 83323638 83323815 -20171159 + B3A SINE B2 1 182 -16 7 1220 1074 112 67 0 chr15 83324110 83324289 -20170685 - RMER6C LTR ERVK 0 690 500 7 1220 267 104 0 0 chr15 83324370 83324418 -20170556 + (ATCTG)n Simple_repeat Simple_repeat 1 48 0 7 1220 1992 211 18 28 chr15 83324536 83325034 -20169940 + RLTR16 LTR ERVK 1 493 -12 7 1220 1188 124 218 4 chr15 83325163 83325397 -20169577 - RMER6C LTR ERVK -406 284 1 7 1220 229 183 15 91 chr15 83325841 83325907 -20169067 + 4.5SRNA scRNA scRNA 28 88 -6 7 1220 430 194 0 12 chr15 83325852 83325947 -20169027 + B1_Mur1 SINE Alu 40 133 -16 7 1220 371 152 0 15 chr15 83325946 83326013 -20168961 + B1_Mur2 SINE Alu 75 140 -9 7 1220 1409 230 105 11 chr15 83326047 83326420 -20168554 + Lx6 LINE L1 7026 7433 -27 7 1220 268 130 43 0 chr15 83327080 83327126 -20167848 + MTC LTR MaLR 372 419 -2 7 1220 299 244 192 0 chr15 83327131 83327209 -20167765 + PB1D10 SINE Alu 15 107 -10 7 1220 335 60 20 0 chr15 83327209 83327259 -20167715 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 7 1220 690 136 60 73 chr15 83327262 83327413 -20167561 + B1_Mur2 SINE Alu 1 149 0 7 1220 342 0 0 0 chr15 83327428 83327466 -20167508 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 7 1220 491 46 0 0 chr15 83327475 83327540 -20167434 + B2_Mm2 SINE B2 1 65 -130 7 1220 765 143 0 93 chr15 83327912 83328074 -20166900 + B1_Mus1 SINE Alu 2 148 0 7 1220 932 84 0 0 chr15 83328118 83328249 -20166725 + B2_Mm2 SINE B2 2 132 -63 7 1220 422 266 11 0 chr15 83328292 83328386 -20166588 - PB1D10 SINE Alu -18 99 5 7 1220 308 262 285 14 chr15 83328839 83328979 -20165995 - B3 SINE B2 -12 204 27 7 1220 763 159 257 6 chr15 83328993 83329164 -20165810 - B3 SINE B2 0 216 3 7 1220 283 324 45 18 chr15 83329168 83329278 -20165696 + MTE2a LTR MaLR 8 120 -299 7 1220 650 236 72 12 chr15 83329279 83329446 -20165528 - B3A SINE B2 -20 178 2 7 1220 720 241 158 29 chr15 83329447 83329720 -20165254 + MTE2a LTR MaLR 72 379 0 7 1220 229 284 62 27 chr15 83330738 83330850 -20164124 - MIRb SINE MIR -46 222 107 7 1220 903 193 18 46 chr15 83330869 83331086 -20163888 + B3 SINE B2 6 216 0 7 1220 278 239 69 14 chr15 83331429 83331501 -20163473 + MTD LTR MaLR 2 77 -342 7 1220 1256 93 10 15 chr15 83331502 83331698 -20163276 + B2_Mm2 SINE B2 1 195 0 7 1220 1053 64 0 0 chr15 83331737 83331877 -20163097 + B1_Mus1 SINE Alu 7 146 -2 7 1220 1092 57 0 0 chr15 83331877 83332017 -20162957 + (GAAA)n Simple_repeat Simple_repeat 2 141 0 7 1220 489 180 180 0 chr15 83332017 83332139 -20162835 + MTD LTR MaLR 67 210 -209 7 1220 497 236 0 68 chr15 83332139 83332257 -20162717 + PB1D9 SINE Alu 1 110 -10 7 1220 339 25 0 0 chr15 83332257 83332297 -20162677 + (GA)n Simple_repeat Simple_repeat 2 41 0 7 1220 732 187 103 6 chr15 83332297 83332453 -20162521 + MTD LTR MaLR 203 373 -46 7 1220 596 221 83 0 chr15 83332964 83333109 -20161865 - B3 SINE B2 -59 157 1 7 1220 887 269 25 21 chr15 83333767 83334002 -20160972 + B4A SINE B4 57 292 0 7 1220 210 215 42 84 chr15 83334042 83334113 -20160861 + B1F SINE Alu 82 149 0 7 1220 221 305 71 31 chr15 83334145 83334243 -20160731 + PB1 SINE Alu 9 110 -17 7 1220 676 250 57 19 chr15 83334429 83334549 -20160425 - ORR1D1 LTR MaLR -8 366 244 7 1220 1323 55 0 0 chr15 83334549 83334826 -20160148 + (CAGG)n Simple_repeat Simple_repeat 1 282 -163 7 1220 1323 55 0 0 chr15 83334835 83334994 -20159980 + (CAGG)n Simple_repeat Simple_repeat 283 445 0 7 1220 676 250 57 19 chr15 83334994 83335074 -20159900 - ORR1D1 LTR MaLR -140 234 149 7 1220 1412 88 0 25 chr15 83335378 83335575 -20159399 - B2_Mm2 SINE B2 -2 193 2 7 1220 297 299 46 53 chr15 83335930 83336082 -20158892 + MER20 DNA MER1_type 45 195 -24 7 1220 1135 94 0 26 chr15 83336333 83336486 -20158488 - B1_Mur4 SINE Alu -1 149 1 7 1220 397 291 51 0 chr15 83336900 83337017 -20157957 + B1F2 SINE Alu 1 123 -26 7 1220 573 180 7 123 chr15 83337032 83337066 -20157908 + B1_Mur4 SINE Alu 22 55 -95 7 1220 1144 64 7 0 chr15 83337066 83337206 -20157768 + B1_Mus1 SINE Alu 2 142 -6 7 1220 675 37 0 0 chr15 83337208 83337290 -20157684 + (GAAA)n Simple_repeat Simple_repeat 3 84 0 7 1220 591 15 0 0 chr15 83337292 83337360 -20157614 + (GGAGA)n Simple_repeat Simple_repeat 2 69 0 7 1220 573 180 7 123 chr15 83337360 83337465 -20157509 + B1_Mur4 SINE Alu 56 150 0 7 1220 497 149 252 20 chr15 83337835 83337986 -20156988 + B2_Mm2 SINE B2 10 195 0 7 1220 490 243 206 11 chr15 83338773 83338948 -20156026 + B3 SINE B2 1 209 -7 7 1220 272 274 0 0 chr15 83339144 83339217 -20155757 + ID4 SINE ID 8 80 -3 7 1220 293 227 30 0 chr15 83339440 83339506 -20155468 + L2a LINE L2 3351 3418 -8 7 1220 719 168 65 14 chr15 83339509 83339648 -20155326 + B1_Mur3 SINE Alu 2 147 -2 7 1220 23 0 0 0 chr15 83339652 83339675 -20155299 + AT_rich Low_complexity Low_complexity 1 23 0 7 1220 364 340 38 19 chr15 83339675 83339834 -20155140 + RSINE1 SINE B4 4 165 0 7 1220 638 211 31 8 chr15 83339858 83339987 -20154987 + ID_B1 SINE B4 88 219 -5 8 1220 623 209 69 40 chr15 83340443 83340617 -20154357 + B3A SINE B2 3 181 -17 8 1220 600 226 0 70 chr15 83341628 83341785 -20153189 + RSINE1 SINE B4 20 165 0 8 1220 1267 34 7 0 chr15 83341810 83341957 -20153017 + B1_Mus1 SINE Alu 1 148 0 8 1220 225 184 0 0 chr15 83341959 83342008 -20152966 + A-rich Low_complexity Low_complexity 1 49 0 8 1220 618 234 19 96 chr15 83342009 83342217 -20152757 + B3A SINE B2 5 196 -2 8 1220 558 155 62 12 chr15 83342217 83342350 -20152624 + B3 SINE B2 2 144 -51 8 1220 249 33 0 0 chr15 83342350 83342380 -20152594 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 1220 523 220 94 17 chr15 83342380 83342426 -20152548 + B2_Mm2 SINE B2 145 194 -1 8 1220 238 26 25 25 chr15 83342652 83342692 -20152282 + (TTTTG)n Simple_repeat Simple_repeat 3 42 0 8 1220 1209 49 0 0 chr15 83342692 83342835 -20152139 - B1_Mus2 SINE Alu -4 143 1 8 1220 201 94 0 0 chr15 83342866 83342898 -20152076 + (TG)n Simple_repeat Simple_repeat 1 32 0 8 1220 3534 127 64 165 chr15 83342942 83343858 -20151116 + RMER21A LTR ERV1 1 824 -123 8 1220 1425 106 9 9 chr15 83343862 83344082 -20150892 + ORR1A4 LTR MaLR 102 321 -8 8 1220 221 273 18 0 chr15 83344087 83344142 -20150832 - B4 SINE B4 -156 136 81 8 1220 886 134 42 0 chr15 83344150 83344292 -20150682 - B1_Mus1 SINE Alu 0 148 1 8 1220 669 139 16 0 chr15 83344418 83344540 -20150434 + URR1A DNA MER1_type 76 199 -27 8 1220 234 288 27 0 chr15 83344552 83344625 -20150349 - B4 SINE B4 -205 87 13 8 1220 342 257 0 0 chr15 83344688 83344762 -20150212 - RSINE1 SINE B4 -90 75 2 8 1220 536 254 54 0 chr15 83344791 83344921 -20150053 + B1_Mur2 SINE Alu 2 138 -11 8 1220 270 0 0 0 chr15 83344922 83344952 -20150022 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 8 1220 1427 123 62 0 chr15 83344967 83345178 -20149796 + URR1A DNA MER1_type 1 224 -2 8 1220 788 244 81 62 chr15 83345179 83345389 -20149585 + B3 SINE B2 3 216 0 8 1220 1338 128 0 14 chr15 83345968 83346190 -20148784 - URR1A DNA MER1_type 0 226 8 8 1220 334 239 0 14 chr15 83346220 83346292 -20148682 + B4 SINE B4 82 152 -140 8 1220 542 175 87 0 chr15 83346233 83346336 -20148638 + PB1D9 SINE Alu 9 120 0 8 1220 2028 179 106 59 chr15 83346485 83346997 -20147977 + RMER2 LTR ERV1 1 536 -31 8 1220 582 279 68 64 chr15 83347018 83347282 -20147692 - MTE2a LTR MaLR -5 374 110 8 1220 748 204 7 45 chr15 83347314 83347468 -20147506 - B1_Mur3 SINE Alu 0 149 2 8 1220 338 381 20 20 chr15 83347469 83347619 -20147355 - MTE2a LTR MaLR -267 152 3 8 1220 2564 130 116 15 chr15 83347698 83348173 -20146801 + RMER15 LTR ERVL 53 575 0 8 1220 862 241 58 24 chr15 83348332 83348540 -20146434 + B3 SINE B2 2 216 0 8 1220 773 211 78 6 chr15 83350420 83350587 -20144387 + B3 SINE B2 38 216 0 8 1220 2597 64 0 58 chr15 83350764 83351111 -20143863 + ORR1A2 LTR MaLR 1 327 0 8 1220 1329 224 169 25 chr15 83351331 83351697 -20143277 - MTD LTR MaLR 0 419 1 8 1220 995 111 0 0 chr15 83351875 83352010 -20142964 + B1_Mur4 SINE Alu 1 135 -15 8 1220 224 139 23 0 chr15 83352043 83352086 -20142888 + CT-rich Low_complexity Low_complexity 2 45 0 8 1220 543 267 49 65 chr15 83352089 83352273 -20142701 - B3A SINE B2 -16 182 2 8 1220 745 253 126 110 chr15 83352370 83352734 -20142240 + MTE2a LTR MaLR 10 379 0 8 1220 1867 114 67 14 chr15 83352757 83353114 -20141860 + RMER6A LTR ERVK 378 753 -3 8 1220 224 121 0 0 chr15 83353116 83353149 -20141825 + B1_Mus1 SINE Alu 2 34 -114 8 1220 1012 82 89 0 chr15 83353200 83353335 -20141639 + B1_Mus1 SINE Alu 2 148 0 8 1220 212 192 39 0 chr15 83353577 83353629 -20141345 + (CACCC)n Simple_repeat Simple_repeat 3 56 0 8 1220 264 267 116 8 chr15 83354704 83354825 -20140149 - L1ME3 LINE L1 -118 6044 5911 8 1220 344 304 111 0 chr15 83354862 83354997 -20139977 + B4A SINE B4 56 205 -87 8 1220 351 257 68 19 chr15 83355045 83355148 -20139826 - PB1D10 SINE Alu -9 108 1 8 1220 352 194 16 0 chr15 83355394 83355456 -20139518 + RSINE1 SINE B4 70 132 -33 8 1220 454 275 14 27 chr15 83355665 83355811 -20139163 - ID_B1 SINE B4 -1 223 80 8 1220 586 180 0 9 chr15 83355853 83355965 -20139009 + PB1D9 SINE Alu 9 119 -1 8 1220 208 318 0 15 chr15 83358375 83358442 -20136532 + MIR SINE MIR 78 143 -65 8 1220 795 266 11 5 chr15 83358717 83358902 -20136072 - ID_B1 SINE B4 0 224 39 8 1220 313 259 37 0 chr15 83358905 83358986 -20135988 - PB1D10 SINE Alu -2 115 32 8 1220 340 202 76 33 chr15 83359350 83359442 -20135532 - PB1D10 SINE Alu 0 117 22 8 1220 670 250 143 20 chr15 83360301 83360497 -20134477 + ID_B1 SINE B4 2 221 -3 8 1220 417 39 0 0 chr15 83361655 83361706 -20133268 + (TG)n Simple_repeat Simple_repeat 1 51 0 8 152 531 144 0 0 chr15 83361706 83361803 -20133171 + (GA)n Simple_repeat Simple_repeat 2 98 0 8 1221 742 267 12 0 chr15 83362298 83362377 -20132597 + ID SINE ID 1 81 -143 8 1221 353 330 17 9 chr15 83362377 83362493 -20132481 + PB1D10 SINE Alu 1 117 0 8 1221 444 240 44 58 chr15 83362655 83362792 -20132182 + B3 SINE B2 71 205 -11 8 1221 408 82 0 0 chr15 83363303 83363364 -20131610 + (TG)n Simple_repeat Simple_repeat 1 61 0 8 1221 701 203 28 7 chr15 83363373 83363517 -20131457 - B4A SINE B4 -15 277 131 8 1221 200 180 0 39 chr15 83363550 83363602 -20131372 + T-rich Low_complexity Low_complexity 4 53 0 8 1221 300 143 39 0 chr15 83363610 83363693 -20131281 - B1_Mur3 SINE Alu -32 117 1 8 1221 223 263 0 165 chr15 83363693 83363737 -20131237 - B4A SINE B4 -208 84 56 8 1221 571 259 7 27 chr15 83364743 83364890 -20130084 - ID_B1 SINE B4 -1 223 80 8 1221 180 176 0 0 chr15 83364961 83364995 -20129979 + CT-rich Low_complexity Low_complexity 2 35 0 8 1221 22 0 0 0 chr15 83365043 83365065 -20129909 + GC_rich Low_complexity Low_complexity 1 22 0 8 1221 777 151 0 23 chr15 83365065 83365194 -20129780 - B1_Mur1 SINE Alu -16 133 8 8 1221 254 228 18 0 chr15 83366591 83366648 -20128326 - ID4 SINE ID -6 77 20 8 1221 724 244 67 49 chr15 83366852 83367076 -20127898 + B4A SINE B4 65 292 0 8 1221 1147 202 160 31 chr15 83367072 83367574 -20127400 - RLTR13B1 LTR ERVK -58 965 425 8 1221 570 183 26 0 chr15 83367577 83367692 -20127282 - RLTR13B1 LTR ERVK -456 446 329 8 1221 1062 70 0 0 chr15 83367700 83367842 -20127132 + B1_Mus2 SINE Alu 6 147 0 8 1221 1460 139 16 8 chr15 83367862 83368116 -20126858 - RLTR13B1 LTR ERVK -632 261 6 8 1221 414 0 0 0 chr15 83368121 83368167 -20126807 + (CA)n Simple_repeat Simple_repeat 1 46 0 8 1221 186 171 0 0 chr15 83368388 83368429 -20126545 + T-rich Low_complexity Low_complexity 3 43 0 8 1221 390 277 78 26 chr15 83368455 83368570 -20126404 - B1F1 SINE Alu -13 136 16 8 1221 1507 50 0 27 chr15 83369107 83369292 -20125682 + B2_Mm2 SINE B2 2 181 -14 8 1221 599 209 31 0 chr15 83369788 83369917 -20125057 + B1_Mur4 SINE Alu 9 141 -9 8 1221 369 282 104 30 chr15 83369945 83370080 -20124894 + RSINE1 SINE B4 3 147 -18 8 1221 405 0 0 0 chr15 83370091 83370136 -20124838 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 1221 243 176 51 139 chr15 83370787 83370866 -20124108 - B4 SINE B4 0 292 221 8 1221 634 268 11 27 chr15 83370898 83371082 -20123892 - B3A SINE B2 -13 185 5 8 1221 599 294 85 47 chr15 83371094 83371305 -20123669 - B4A SINE B4 -72 220 2 8 1221 489 17 0 0 chr15 83372572 83372630 -20122344 + (TG)n Simple_repeat Simple_repeat 2 59 0 8 1221 794 228 141 0 chr15 83372688 83372872 -20122102 - B3 SINE B2 -6 210 1 8 1221 603 94 0 0 chr15 83375210 83375295 -20119679 - B1_Mus2 SINE Alu -18 129 45 8 1221 240 167 54 152 chr15 83375235 83375327 -20119647 - RLTR25B LTR ERVK -519 509 427 8 1221 891 182 14 0 chr15 83378466 83378609 -20116365 - B1_Mur1 SINE Alu 0 149 5 8 1221 585 253 17 24 chr15 83378625 83378798 -20116176 - ID_B1 SINE B4 -1 223 58 8 1221 310 289 48 0 chr15 83379918 83380001 -20114973 + B4A SINE B4 27 113 -179 8 1221 216 192 0 88 chr15 83380176 83380187 -20114787 + B4A SINE B4 80 85 -207 8 1221 293 128 0 0 chr15 83380187 83380234 -20114740 + B1_Mur4 SINE Alu 2 48 -102 8 1221 620 254 5 52 chr15 83380234 83380425 -20114549 + B3A SINE B2 1 182 -16 8 1221 295 273 79 40 chr15 83380509 83380635 -20114339 + MER20 DNA MER1_type 55 185 -34 8 1221 343 216 27 0 chr15 83381288 83381362 -20113612 + ID4_ SINE ID 1 76 -7 8 1221 234 302 85 0 chr15 83381543 83381672 -20113302 - L1M3 LINE L1 -716 5464 5325 8 1221 447 19 0 0 chr15 83381737 83381789 -20113185 + (TG)n Simple_repeat Simple_repeat 1 52 0 8 1221 308 300 0 123 chr15 83381851 83381896 -20113078 - PB1 SINE Alu -27 100 68 8 1221 660 209 14 28 chr15 83381896 83382039 -20112935 - B1_Mur1 SINE Alu -7 142 2 8 1221 308 300 0 123 chr15 83382039 83382107 -20112867 - PB1 SINE Alu -60 67 1 8 1221 347 260 0 0 chr15 83382136 83382213 -20112761 + B3A SINE B2 1 77 -121 8 1221 1162 62 14 0 chr15 83382351 83382495 -20112479 + B1_Mus2 SINE Alu 2 147 0 8 1221 568 302 27 0 chr15 83382506 83382655 -20112319 + RSINE1 SINE B4 3 155 -10 8 1221 240 35 0 0 chr15 83382657 83382686 -20112288 + (CA)n Simple_repeat Simple_repeat 1 29 0 8 1221 223 295 26 95 chr15 83383308 83383424 -20111550 + PB1D10 SINE Alu 10 117 0 8 1221 784 186 256 0 chr15 83383453 83383625 -20111349 + B3 SINE B2 1 216 0 8 1221 636 221 0 0 chr15 83383990 83384103 -20110871 - PB1D9 SINE Alu -6 114 2 8 1221 444 282 56 14 chr15 83384106 83384250 -20110724 - B3A SINE B2 -48 150 1 9 1221 697 240 58 37 chr15 83384322 83384512 -20110462 + B3 SINE B2 8 201 -15 9 1221 867 181 195 43 chr15 83384611 83384796 -20110178 - B3 SINE B2 -3 213 1 9 1221 27 0 0 0 chr15 83384798 83384825 -20110149 + AT_rich Low_complexity Low_complexity 1 27 0 9 1221 1307 102 11 0 chr15 83384828 83385005 -20109969 + B2_Mm1t SINE B2 1 179 -14 9 1221 348 72 330 37 chr15 83385037 83385146 -20109828 + B2_Mm2 SINE B2 47 187 -8 9 1221 801 184 7 33 chr15 83385158 83385310 -20109664 + B1_Mur3 SINE Alu 2 149 0 9 1221 799 212 0 24 chr15 83385318 83385482 -20109492 - B3 SINE B2 -11 205 46 9 1221 920 106 43 0 chr15 83386587 83386728 -20108246 + B1_Mus1 SINE Alu 1 147 -1 9 1221 240 130 0 0 chr15 83386731 83386777 -20108197 + (CA)n Simple_repeat Simple_repeat 2 47 0 9 1221 608 268 40 23 chr15 83387083 83387259 -20107715 - MLT1A0 LTR MaLR 0 365 187 9 1221 608 275 24 48 chr15 83387392 83387602 -20107372 + RMER10B LTR ERVL 194 398 0 9 1221 388 283 102 76 chr15 83387603 83387760 -20107214 - MLT1A0 LTR MaLR -174 191 31 9 1221 408 40 0 0 chr15 83387892 83387942 -20107032 + (TG)n Simple_repeat Simple_repeat 1 50 0 9 1221 378 0 0 0 chr15 83387942 83387983 -20106991 + (GA)n Simple_repeat Simple_repeat 1 42 0 9 1221 639 187 73 0 chr15 83387994 83388117 -20106857 - B1_Mur1 SINE Alu -17 132 1 9 1221 258 166 0 37 chr15 83388174 83388239 -20106735 - B2_Mm2 SINE B2 -107 109 47 9 1221 927 136 0 0 chr15 83388257 83388397 -20106577 - B2_Mm2 SINE B2 -54 141 2 9 1221 673 232 78 13 chr15 83388419 83388572 -20106402 - B3A SINE B2 -35 163 1 9 1221 1116 304 0 3 chr15 83388767 83389051 -20105923 - B4A SINE B4 -2 290 8 9 1221 572 196 0 0 chr15 83389086 83389183 -20105791 + B1_Mur4 SINE Alu 2 98 -52 9 1221 4473 133 70 26 chr15 83389183 83389980 -20104994 + RMER13A LTR ERVK 1 832 -28 9 1221 365 83 0 16 chr15 83389984 83390045 -20104929 + B1_Mur4 SINE Alu 90 149 -1 9 1221 289 200 140 50 chr15 83390180 83390280 -20104694 + MT2B LTR ERVL 156 264 -337 9 1221 705 50 10 10 chr15 83390215 83390315 -20104659 + B1_Mus2 SINE Alu 47 146 -1 9 1221 441 133 0 0 chr15 83390317 83390392 -20104582 + (CTAA)n Simple_repeat Simple_repeat 3 77 0 9 1221 282 116 0 0 chr15 83390853 83390896 -20104078 + (ATG)n Simple_repeat Simple_repeat 2 44 0 9 1221 612 144 19 0 chr15 83390902 83391006 -20103968 - B1_Mus2 SINE Alu -4 143 38 9 1221 243 186 62 125 chr15 83390941 83391021 -20103953 - RLTR25B LTR ERVK -519 509 435 9 1221 1669 21 11 0 chr15 83391023 83391210 -20103764 - B2_Mm1a SINE B2 -3 190 2 9 1221 580 268 0 0 chr15 83391353 83391476 -20103498 + RSINE1 SINE B4 3 125 -40 9 1221 399 296 58 58 chr15 83391648 83391838 -20103136 + HAL1 LINE L1 1155 1344 -1163 9 1221 431 229 146 0 chr15 83391844 83391940 -20103034 + PB1D10 SINE Alu 1 110 -7 9 1221 1044 203 42 28 chr15 83391959 83392037 -20102937 + B3 SINE B2 1 86 -130 9 1221 369 0 0 0 chr15 83392037 83392078 -20102896 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 9 1221 1108 74 0 0 chr15 83392079 83392214 -20102760 - B1_Mus2 SINE Alu -12 135 1 9 1221 1044 203 42 28 chr15 83392214 83392346 -20102628 + B3 SINE B2 87 216 0 9 1221 709 297 0 32 chr15 83393284 83393377 -20101597 + B4 SINE B4 1 87 -205 9 1221 235 351 0 105 chr15 83393377 83393501 -20101473 + B1_Mur3 SINE Alu 3 113 -36 9 1221 309 293 0 12 chr15 83393580 83393663 -20101311 - ID4_ SINE ID -1 82 1 9 1221 263 28 28 0 chr15 83393669 83393705 -20101269 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 9 1221 270 296 136 0 chr15 83393762 83393843 -20101131 - B1F1 SINE Alu -47 102 11 9 1221 204 97 0 0 chr15 83393972 83394003 -20100971 + (CGGGG)n Simple_repeat Simple_repeat 1 31 0 9 1221 284 0 0 27 chr15 83395269 83395306 -20099668 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 9 1221 1488 63 26 0 chr15 83395307 83395496 -20099478 - B2_Mm2 SINE B2 -1 194 1 9 1221 314 254 0 0 chr15 83396868 83396931 -20098043 + B1F SINE Alu 37 99 -50 9 1221 440 212 0 88 chr15 83396943 83396958 -20098016 + MT2B LTR ERVL 150 253 -348 9 1221 740 71 0 0 chr15 83396958 83397057 -20097917 + B1_Mus1 SINE Alu 1 99 -49 9 1221 1256 75 0 6 chr15 83397087 83397261 -20097713 + B2_Mm2 SINE B2 8 180 -15 9 1221 317 197 0 13 chr15 83397271 83397348 -20097626 + G-rich Low_complexity Low_complexity 3 78 0 9 1221 291 250 32 136 chr15 83397360 83397485 -20097489 + ID_B1 SINE B4 81 192 -32 9 1221 348 200 45 68 chr15 83397386 83397498 -20097476 + B1F SINE Alu 17 115 -2 9 1221 920 119 30 0 chr15 83398891 83399025 -20095949 + B1_Mur4 SINE Alu 1 138 -12 9 1221 225 228 35 0 chr15 83399110 83399167 -20095807 + ID_B1 SINE B4 132 190 -34 9 1221 1449 180 96 19 chr15 83399177 83399500 -20095474 - MTD LTR MaLR 0 419 72 9 1221 1510 73 5 5 chr15 83399579 83399772 -20095202 + B2_Mm1t SINE B2 1 193 0 9 1221 335 244 12 37 chr15 83399784 83399865 -20095109 + ID4 SINE ID 5 83 0 9 1221 1523 197 96 54 chr15 83400015 83400369 -20094605 - ORR1D2 LTR MaLR -1 369 1 9 1221 221 243 71 129 chr15 83400382 83400467 -20094507 - ID2 SINE ID -2 81 2 9 1221 206 224 0 0 chr15 83400502 83400551 -20094423 + (TG)n Simple_repeat Simple_repeat 1 49 0 9 1221 407 301 63 100 chr15 83400551 83400850 -20094124 - B4A SINE B4 0 292 5 9 1221 223 283 26 62 chr15 83400919 83401032 -20093942 - MIR SINE MIR -66 142 34 9 1221 228 340 20 30 chr15 83402474 83402574 -20092400 - MIR SINE MIR -133 129 31 9 1221 345 196 38 5 chr15 83402901 83402999 -20091975 + AluF_3 SINE Alu 137 212 -99 9 1221 1124 82 6 0 chr15 83403183 83403341 -20091633 + B2_Mm1t SINE B2 2 160 -33 9 1221 477 0 0 0 chr15 83403341 83403394 -20091580 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 9 1221 432 97 14 14 chr15 83403394 83403467 -20091507 + B2_Mm1t SINE B2 107 179 -14 9 1221 265 160 0 0 chr15 83403514 83403564 -20091410 + B2_Mm2 SINE B2 47 96 -99 9 1221 294 129 0 0 chr15 83403588 83403650 -20091324 + (A)n Simple_repeat Simple_repeat 1 62 0 9 1221 213 39 0 0 chr15 83403716 83403742 -20091232 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 9 1221 426 216 59 0 chr15 83403759 83403860 -20091114 + B1F2 SINE Alu 21 136 -13 9 1221 23 0 0 0 chr15 83403860 83403883 -20091091 + AT_rich Low_complexity Low_complexity 1 23 0 9 1221 541 270 97 39 chr15 83405545 83405699 -20089275 - RSINE1 SINE B4 0 165 3 9 1221 210 143 0 0 chr15 83407197 83407232 -20087742 + (GGGA)n Simple_repeat Simple_repeat 3 37 0 9 1221 623 290 77 0 chr15 83407884 83408067 -20086907 + B3A SINE B2 2 198 0 9 1221 1171 81 0 0 chr15 83408730 83408878 -20086096 - B1_Mus1 SINE Alu 0 148 1 9 1221 263 362 19 19 chr15 83409264 83409371 -20085603 + MIRc SINE MIR 91 197 -71 9 1221 348 211 49 0 chr15 83409939 83410025 -20084949 + PB1D10 SINE Alu 20 113 -7 9 1221 250 157 0 89 chr15 83409981 83410037 -20084937 + ID_B1 SINE B4 174 224 0 9 1221 29 0 0 0 chr15 83410043 83410072 -20084902 + AT_rich Low_complexity Low_complexity 1 29 0 9 1221 422 264 169 18 chr15 83411292 83411458 -20083516 - B2_Mm2 SINE B2 -3 192 2 9 1221 376 246 209 64 chr15 83411497 83411730 -20083244 - B4 SINE B4 -2 290 2 9 1221 751 186 27 14 chr15 83413513 83413660 -20081314 + B1_Mur3 SINE Alu 1 149 0 9 1221 254 140 211 0 chr15 83413859 83413916 -20081058 - RSINE1 SINE B4 -2 163 95 9 1221 417 293 34 8 chr15 83414735 83414852 -20080122 - PB1D7 SINE Alu 0 120 1 9 1221 364 288 79 2 chr15 83415554 83415713 -20079261 + MLT1F1 LTR MaLR 147 325 -254 9 1221 398 284 112 17 chr15 83415731 83415910 -20079064 + MLT1F1 LTR MaLR 358 553 -16 9 1221 620 262 50 15 chr15 83416318 83416516 -20078458 - B3 SINE B2 -7 209 5 9 1221 254 347 137 27 chr15 83416671 83416890 -20078084 + MER2 DNA MER2_type 1 243 -102 9 1221 596 231 46 0 chr15 83418174 83418304 -20076670 - B1_Mur1 SINE Alu -13 136 1 9 1221 1537 52 0 50 chr15 83418335 83418537 -20076437 - B2_Mm1a SINE B2 -1 192 1 9 1221 764 184 14 21 chr15 83418542 83418686 -20076288 - B1_Mur3 SINE Alu 0 149 7 9 1221 322 271 51 114 chr15 83418548 83418706 -20076268 - B4A SINE B4 -71 221 74 9 1221 840 173 43 14 chr15 83418714 83418855 -20076119 - B1_Mus2 SINE Alu 0 147 3 9 1221 1281 170 8 63 chr15 83419162 83419400 -20075574 - URR1B DNA MER1_type 0 225 1 9 1221 1225 48 7 0 chr15 83419432 83419579 -20075395 + B1_Mus1 SINE Alu 1 148 0 9 1221 249 89 35 18 chr15 83420022 83420079 -20074895 - B2_Mm1t SINE B2 -3 190 133 9 1221 1339 96 17 0 chr15 83420116 83420294 -20074680 - B2_Mm2 SINE B2 -14 181 1 9 1221 698 289 53 40 chr15 83420700 83420927 -20074047 + MTE2a LTR MaLR 43 272 -107 9 1221 241 290 140 0 chr15 83420978 83421078 -20073896 + MTE2a LTR MaLR 250 363 -16 9 1221 287 317 156 46 chr15 83422610 83422828 -20072146 + MIR SINE MIR 5 246 -22 9 1221 580 252 13 33 chr15 83423168 83423320 -20071654 + RSINE1 SINE B4 8 156 -9 9 1221 243 0 0 0 chr15 83424091 83424118 -20070856 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1221 185 42 0 0 chr15 83425088 83425112 -20069862 + MIRc SINE MIR 119 142 -126 9 1221 22 35 0 0 chr15 83425830 83425859 -20069115 + AT_rich Low_complexity Low_complexity 1 29 0 1 1221 628 224 154 27 chr15 83425859 83426047 -20068927 - B3 SINE B2 0 216 5 1 1221 186 43 0 0 chr15 83426049 83426072 -20068902 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 1 1221 273 29 0 0 chr15 83426072 83426106 -20068868 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1221 241 264 82 14 chr15 83426106 83426222 -20068752 - B4 SINE B4 -25 140 11 1 1221 297 304 50 59 chr15 83426248 83426367 -20068607 - ID_B1 SINE B4 -10 214 97 1 1221 390 181 0 0 chr15 83426493 83426566 -20068408 - PB1D9 SINE Alu -73 74 2 1 1221 304 264 0 40 chr15 83426502 83426577 -20068397 - B4 SINE B4 -142 150 79 1 1221 371 320 0 10 chr15 83426599 83426703 -20068271 + B4A SINE B4 185 287 -5 1 1221 665 206 13 54 chr15 83426998 83427147 -20067827 - B3 SINE B2 -73 143 1 1 1221 832 188 0 32 chr15 83427453 83427607 -20067367 - B1_Mur2 SINE Alu 0 149 1 1 1221 270 0 0 0 chr15 83427643 83427673 -20067301 + (TCTA)n Simple_repeat Simple_repeat 2 31 0 1 1221 906 181 0 0 chr15 83427674 83427818 -20067156 - B1_Mus1 SINE Alu -4 144 1 1 1221 1484 179 87 12 chr15 83427876 83427924 -20067050 - RLTR14 LTR ERV1 -1 381 334 1 1221 213 65 0 0 chr15 83427924 83427955 -20067019 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1221 1484 179 87 12 chr15 83427955 83428239 -20066735 - RLTR14 LTR ERV1 -49 333 25 1 1221 1239 41 0 0 chr15 83428733 83428880 -20066094 + B1_Mus2 SINE Alu 1 147 0 1 1221 279 0 0 0 chr15 83428880 83428911 -20066063 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1221 222 245 26 26 chr15 83428956 83429069 -20065905 + (TTATA)n Simple_repeat Simple_repeat 5 117 0 1 1221 1126 99 53 32 chr15 83429080 83429111 -20065863 - B2_Mm1a SINE B2 -1 192 161 1 1221 216 0 0 0 chr15 83429111 83429135 -20065839 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 1 1221 1126 99 53 32 chr15 83429135 83429290 -20065684 - B2_Mm1a SINE B2 -33 160 2 1 1221 2755 78 8 0 chr15 83429313 83429672 -20065302 - L1_Mus2 LINE L1 0 6566 6205 1 1221 717 45 0 0 chr15 83430036 83430125 -20064849 + (TG)n Simple_repeat Simple_repeat 2 90 0 1 1221 334 165 172 20 chr15 83430521 83430620 -20064354 + RMER10A LTR ERVL 273 386 -56 1 1221 22 0 0 0 chr15 83430952 83430974 -20064000 + AT_rich Low_complexity Low_complexity 1 22 0 1 1221 754 148 55 0 chr15 83430976 83431104 -20063870 + B1_Mur4 SINE Alu 1 135 -15 1 1221 355 261 23 108 chr15 83431348 83431524 -20063450 - B4A SINE B4 -130 162 2 1 1221 1917 244 73 68 chr15 83431568 83432226 -20062748 + Lx8 LINE L1 6776 7577 -67 1 1221 909 127 227 22 chr15 83432278 83432463 -20062511 - URR1A DNA MER1_type 0 226 4 1 1221 416 212 159 35 chr15 83432518 83432659 -20062315 + B3A SINE B2 13 157 -38 1 1221 198 0 0 0 chr15 83432659 83432681 -20062293 + (CAGA)n Simple_repeat Simple_repeat 1 22 0 1 1221 477 47 0 0 chr15 83432683 83432747 -20062227 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 1221 260 267 49 104 chr15 83432747 83432784 -20062190 + B2_Mm2 SINE B2 158 191 -4 1 1221 191 170 21 0 chr15 83432885 83432932 -20062042 + CT-rich Low_complexity Low_complexity 4 51 0 1 1221 989 140 6 6 chr15 83433756 83433776 -20061198 - B2_Mm1t SINE B2 -12 181 162 1 1221 387 0 0 0 chr15 83433776 83433819 -20061155 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 1 1221 1018 101 0 7 chr15 83433819 83433971 -20061003 - B2_Mm2 SINE B2 -32 161 9 1 1221 211 214 0 0 chr15 83434243 83434285 -20060689 + L2b LINE L2 3328 3369 -6 1 1221 358 282 108 75 chr15 83435484 83435915 -20059059 + MLT2B2 LTR ERVL 7 547 -15 1 1221 182 105 26 0 chr15 83437052 83437090 -20057884 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 1221 246 174 0 0 chr15 83441026 83441072 -20053902 + T-rich Low_complexity Low_complexity 1 46 0 1 1221 1208 35 14 0 chr15 83441072 83441217 -20053757 - B1_Mus1 SINE Alu 0 148 2 1 1221 850 91 136 0 chr15 83441275 83441407 -20053567 - B1_Mur4 SINE Alu 0 150 1 1 1221 473 216 42 67 chr15 83441507 83441626 -20053348 + PB1D9 SINE Alu 3 118 -2 1 1221 33 43 0 0 chr15 83441697 83441744 -20053230 + AT_rich Low_complexity Low_complexity 1 47 0 1 1221 21 36 0 0 chr15 83441750 83441778 -20053196 + AT_rich Low_complexity Low_complexity 1 28 0 1 1221 337 235 46 92 chr15 83441940 83442071 -20052903 + MT2B LTR ERVL 154 278 -323 1 1221 798 155 0 72 chr15 83441955 83442108 -20052866 + B1_Mur1 SINE Alu 7 148 -1 1 1221 419 206 10 89 chr15 83447521 83447622 -20047352 + B4A SINE B4 2 94 -198 1 1221 300 322 116 27 chr15 83447662 83447809 -20047165 + ORR1E LTR MaLR 42 201 -158 1 1221 482 320 13 7 chr15 83448134 83448285 -20046689 + ID_B1 SINE B4 73 224 0 1 1221 893 156 0 20 chr15 83448289 83448439 -20046535 + B1_Mur2 SINE Alu 1 147 -2 1 1221 225 0 0 0 chr15 83448453 83448478 -20046496 + (CTA)n Simple_repeat Simple_repeat 1 25 0 1 1221 273 196 0 0 chr15 83448551 83448607 -20046367 + (CAA)n Simple_repeat Simple_repeat 1 56 0 1 1221 1723 124 119 16 chr15 83449240 83449551 -20045423 + ORR1B1 LTR MaLR 1 343 -51 1 1221 1262 87 9 29 chr15 83449555 83449771 -20045203 - B2_Mm2 SINE B2 -2 214 1 1 1221 464 123 25 0 chr15 83449771 83449844 -20045130 + ORR1B1 LTR MaLR 320 394 0 1 1221 480 187 0 0 chr15 83450174 83450297 -20044677 + (TG)n Simple_repeat Simple_repeat 1 123 0 1 1221 289 195 61 61 chr15 83451132 83451145 -20043829 + B1_Mur1 SINE Alu 59 140 -9 1 1221 405 130 29 0 chr15 83451145 83451214 -20043760 + ID_B1 SINE B4 145 215 -9 1 1221 915 255 91 40 chr15 83452324 83452598 -20042376 + B4A SINE B4 1 288 -4 1 1221 1120 60 26 0 chr15 83452631 83452865 -20042109 + (TAGA)n Simple_repeat Simple_repeat 1 240 0 1 1221 1113 217 5 14 chr15 83453336 83453551 -20041423 - B3 SINE B2 -3 213 1 1 1221 240 224 17 0 chr15 83453648 83453706 -20041268 + B4A SINE B4 2 60 -232 1 1221 2019 79 0 70 chr15 83453712 83454040 -20040934 - ORR1A4 LTR MaLR -24 305 1 1 1221 359 294 19 10 chr15 83454040 83454133 -20040841 + B4 SINE B4 53 146 -146 1 1221 430 261 68 25 chr15 83455349 83455467 -20039507 - ID_B1 SINE B4 -5 219 97 1 1221 356 305 0 19 chr15 83456048 83456155 -20038819 + ID_B1 SINE B4 105 209 -15 1 1221 1271 41 0 0 chr15 83456190 83456337 -20038637 - B1_Mus2 SINE Alu 0 147 1 1 1221 1670 127 120 57 chr15 83456857 83457208 -20037766 + ORR1C2 LTR MaLR 1 373 -11 1 1221 710 188 72 0 chr15 83457358 83457496 -20037478 + B1F2 SINE Alu 2 149 0 1 1221 1974 67 3 66 chr15 83457595 83457898 -20037076 + ORR1A2 LTR MaLR 1 284 -43 1 1221 1218 55 0 7 chr15 83457898 83458035 -20036939 + B1_Mus1 SINE Alu 1 137 -11 1 1221 216 86 0 0 chr15 83458035 83458070 -20036904 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1221 681 67 0 0 chr15 83458167 83458256 -20036718 + B1_Mus2 SINE Alu 54 142 -5 1 1221 282 75 0 0 chr15 83458258 83458298 -20036676 + ORR1A2 LTR MaLR 287 326 0 1 1221 266 241 0 33 chr15 83460220 83460280 -20034694 - B4A SINE B4 0 292 235 1 1221 597 202 128 6 chr15 83460291 83460458 -20034516 - B3A SINE B2 -10 185 3 1 1221 628 229 29 123 chr15 83460462 83460706 -20034268 - B4A SINE B4 -66 226 6 1 1221 291 245 139 30 chr15 83460711 83460812 -20034162 - PB1D10 SINE Alu 0 117 6 1 1221 235 256 33 55 chr15 83460994 83461085 -20033889 - L4 LINE RTE -155 1874 1786 1 1221 4778 185 147 120 chr15 83461123 83461431 -20033543 + ORR1A2-int LTR MaLR 3 312 -1197 1 1221 225 0 0 0 chr15 83461431 83461456 -20033518 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 1221 4778 185 147 120 chr15 83461456 83462512 -20032462 + ORR1A2-int LTR MaLR 313 1461 -48 1 1221 950 69 0 8 chr15 83462512 83462644 -20032330 + (TTTCC)n Simple_repeat Simple_repeat 5 135 0 1 1221 4778 185 147 120 chr15 83462644 83462692 -20032282 + ORR1A2-int LTR MaLR 1462 1462 -47 1 1221 901 140 0 40 chr15 83462692 83462841 -20032133 - B1_Mur4 SINE Alu -5 145 3 1 1221 4778 185 147 120 chr15 83462841 83462893 -20032081 + ORR1A2-int LTR MaLR 1462 1508 -1 1 1221 1784 171 91 20 chr15 83462893 83463246 -20031728 + ORR1A2 LTR MaLR 1 378 -6 1 1221 1229 179 13 22 chr15 83463809 83464037 -20030937 - URR1A DNA MER1_type 0 226 1 1 1221 1405 93 5 15 chr15 83466269 83466465 -20028509 - B2_Mm2 SINE B2 -1 194 1 1 1221 242 256 132 11 chr15 83469320 83469411 -20025563 + MIRb SINE MIR 50 151 -117 1 1221 687 25 0 0 chr15 83470062 83470143 -20024831 + (GA)n Simple_repeat Simple_repeat 1 81 0 1 1221 195 42 0 0 chr15 83471165 83471189 -20023785 + (G)n Simple_repeat Simple_repeat 1 24 0 1 1221 347 248 93 8 chr15 83472939 83473057 -20021917 - MER45A DNA Tip100 -24 154 27 1 1221 345 159 0 0 chr15 83474396 83474459 -20020515 + G-rich Low_complexity Low_complexity 3 65 0 1 1221 363 23 0 0 chr15 83480078 83480122 -20014852 + (TC)n Simple_repeat Simple_repeat 2 45 0 1 1221 234 0 0 0 chr15 83480122 83480148 -20014826 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 1221 180 0 0 0 chr15 83483418 83483438 -20011536 + (TTGG)n Simple_repeat Simple_repeat 2 21 0 1 1221 22 0 0 0 chr15 83483908 83483930 -20011044 + AT_rich Low_complexity Low_complexity 1 22 0 1 1221 297 0 0 0 chr15 83484802 83484835 -20010139 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1221 213 39 0 0 chr15 83486227 83486253 -20008721 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1 1221 868 142 0 28 chr15 83486771 83486916 -20008058 - B1_Mur3 SINE Alu 0 149 9 1 1221 670 53 0 21 chr15 83486922 83487019 -20007955 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 1 1221 406 261 106 21 chr15 83487767 83487908 -20007066 + RMER15 LTR ERVL 422 574 -1 1 1221 738 156 102 0 chr15 83488505 83488633 -20006341 + B1_Mur2 SINE Alu 5 145 -4 1 1221 315 0 0 0 chr15 83488788 83488823 -20006151 + (ATTG)n Simple_repeat Simple_repeat 2 36 0 1 1221 698 203 141 0 chr15 83488823 83489000 -20005974 - ID_B1 SINE B4 -10 214 13 1 1221 245 237 64 26 chr15 83490353 83490431 -20004543 + ID SINE ID 2 82 -142 1 1221 423 0 0 0 chr15 83492048 83492095 -20002879 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1222 1117 156 102 0 chr15 83493168 83493373 -20001601 + URR1A DNA MER1_type 1 226 0 1 1222 476 271 25 82 chr15 83493373 83493450 -20001524 - CYRA11_Mm Unknown Y-chromosome -447 170 108 1 1222 315 311 92 33 chr15 83497784 83497937 -19997037 + MLT1A0 LTR MaLR 118 279 -86 1 1222 228 111 0 0 chr15 83497938 83497974 -19997000 + (CAGAA)n Simple_repeat Simple_repeat 1 36 0 1 1222 270 364 34 0 chr15 83500628 83500746 -19994228 + MER94 DNA AcHobo 7 128 -6 1 1222 607 279 7 13 chr15 83500844 83500993 -19993981 - RSINE1 SINE B4 -16 149 2 2 1222 354 23 0 0 chr15 83501058 83501101 -19993873 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1222 393 258 12 10 chr15 83501101 83501221 -19993753 + L1MD2 LINE L1 6196 6295 -64 4 1222 190 95 48 0 chr15 83501221 83501263 -19993711 + (TTTTTG)n Simple_repeat Simple_repeat 2 45 0 5 1222 287 347 8 8 chr15 83502789 83502914 -19992060 + PB1 SINE Alu 1 125 -2 6 1222 245 306 0 53 chr15 83503344 83503420 -19991554 + MamGypLTR2 LTR Gypsy 1087 1158 -31 7 1222 495 78 0 0 chr15 83505090 83505167 -19989807 + (TC)n Simple_repeat Simple_repeat 2 78 0 8 1222 207 0 0 0 chr15 83505167 83505190 -19989784 + (CA)n Simple_repeat Simple_repeat 1 23 0 9 1222 464 32 0 16 chr15 83506375 83506438 -19988536 + (AGCTG)n Simple_repeat Simple_repeat 3 64 0 1 1222 2157 98 6 0 chr15 83507816 83508132 -19986842 + ORR1A2 LTR MaLR 1 318 -9 1 1222 225 339 173 11 chr15 83508212 83508403 -19986571 - MIRb SINE MIR -34 234 13 1 1222 513 233 8 8 chr15 83513646 83513767 -19981207 - MER121 Unknown Unknown -172 240 120 1 1222 200 122 24 0 chr15 83514646 83514687 -19980287 + (TGGGGG)n Simple_repeat Simple_repeat 1 42 0 1 1222 275 313 23 105 chr15 83514819 83515212 -19979762 - L1MB5 LINE L1 -45 6139 5778 1 1222 551 222 34 0 chr15 83515216 83515333 -19979641 - B3A SINE B2 -73 125 5 1 1222 609 267 90 34 chr15 83515361 83515594 -19979380 - L1MB5 LINE L1 -620 5564 5319 1 1222 2067 110 19 0 chr15 83515755 83516063 -19978911 - ORR1A2 LTR MaLR -3 324 11 1 1222 1379 224 53 103 chr15 83516643 83517042 -19977932 - MTE2a LTR MaLR 0 379 1 1 1222 485 268 112 7 chr15 83517805 83517922 -19977052 - B4A SINE B4 -18 274 143 1 1222 1004 122 89 0 chr15 83517922 83518102 -19976872 - URR1B DNA MER1_type 0 225 30 2 1222 216 0 0 0 chr15 83518649 83518673 -19976301 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 1222 306 0 0 0 chr15 83518736 83518770 -19976204 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1222 920 102 7 14 chr15 83518974 83519113 -19975861 + B1_Mus2 SINE Alu 9 146 -1 2 1222 1421 74 0 59 chr15 83521727 83521929 -19973045 + B2_Mm2 SINE B2 2 191 -4 2 1222 483 261 14 27 chr15 83522755 83522901 -19972073 + ID_B1 SINE B4 81 224 0 2 1222 288 344 195 11 chr15 83523750 83523935 -19971039 - MIR SINE MIR -4 258 40 2 1222 522 331 101 11 chr15 83524298 83524576 -19970398 + L2 LINE L2 2581 2883 -536 2 1222 2183 137 39 18 chr15 83524579 83524925 -19970049 + ORR1B1 LTR MaLR 1 359 -35 2 1222 2047 191 47 49 chr15 83524925 83525372 -19969602 + RLTR41 LTR ERV1 1 446 0 2 1222 2183 137 39 18 chr15 83525372 83525411 -19969563 + ORR1B1 LTR MaLR 360 394 0 2 1222 181 296 182 10 chr15 83526843 83526942 -19968032 + MIRb SINE MIR 30 145 -123 3 1222 186 284 146 12 chr15 83526908 83526990 -19967984 + MIR3 SINE MIR 106 198 -10 3 1222 267 174 0 0 chr15 83527121 83527167 -19967807 + L2b LINE L2 3320 3365 -10 3 1222 256 297 10 62 chr15 83528577 83528674 -19966300 + MER115 DNA Tip100 478 569 -124 3 1222 389 259 55 18 chr15 83528802 83528912 -19966062 - PB1D7 SINE Alu -5 115 2 3 1222 348 83 0 0 chr15 83529326 83529374 -19965600 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1222 608 285 75 5 chr15 83529430 83529617 -19965357 - B4 SINE B4 -92 200 1 3 1222 279 337 44 66 chr15 83530131 83530312 -19964662 - MIRb SINE MIR -28 240 64 3 1222 770 277 58 16 chr15 83531701 83531943 -19963031 - MTE2b LTR MaLR -110 269 18 3 1222 631 355 111 7 chr15 83531997 83532286 -19962688 + MLT1C LTR MaLR 143 461 -6 3 1222 422 281 144 0 chr15 83532614 83532753 -19962221 + MLT1B LTR MaLR 4 162 -228 4 1222 237 169 0 0 chr15 83532773 83532832 -19962142 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1222 628 292 0 53 chr15 83532847 83532989 -19961985 - RSINE1 SINE B4 -2 163 24 4 1222 1518 225 36 90 chr15 83532989 83533020 -19961954 + ORR1D2 LTR MaLR 1 28 -342 4 1222 1197 74 0 0 chr15 83533020 83533168 -19961806 + B1_Mus1 SINE Alu 1 148 0 4 1222 1518 225 36 90 chr15 83533168 83533526 -19961448 + ORR1D2 LTR MaLR 29 369 -1 4 1222 628 292 0 53 chr15 83533526 83533553 -19961421 - RSINE1 SINE B4 -142 23 3 4 1222 992 232 26 158 chr15 83534075 83534499 -19960475 + MTE2a LTR MaLR 12 379 0 4 1222 2023 136 196 3 chr15 83535126 83535479 -19959495 + MTC LTR MaLR 1 421 0 4 1222 191 89 53 18 chr15 83536603 83536660 -19958314 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1222 641 278 6 24 chr15 83536674 83536840 -19958134 - B4A SINE B4 -4 288 126 4 1222 22 0 0 0 chr15 83537009 83537031 -19957943 + GC_rich Low_complexity Low_complexity 1 22 0 4 1222 207 305 17 0 chr15 83537205 83537264 -19957710 - MIR SINE MIR -122 140 81 5 1222 222 219 82 0 chr15 83537679 83537752 -19957222 + (TTCA)n Simple_repeat Simple_repeat 3 81 0 5 1222 216 253 0 0 chr15 83537889 83537964 -19957010 + (CA)n Simple_repeat Simple_repeat 1 75 0 5 1222 654 202 0 0 chr15 83537977 83538150 -19956824 + (CA)n Simple_repeat Simple_repeat 1 173 0 5 1222 380 274 44 9 chr15 83538739 83538853 -19956121 - B4A SINE B4 -173 119 2 4 1222 749 234 164 0 chr15 83538853 83539050 -19955924 - B4A SINE B4 -62 230 1 5 1222 659 135 7 22 chr15 83539236 83539372 -19955602 + CT-rich Low_complexity Low_complexity 3 136 0 5 1222 22 0 0 0 chr15 83539597 83539619 -19955355 + AT_rich Low_complexity Low_complexity 1 22 0 5 1222 414 0 0 0 chr15 83539683 83539729 -19955245 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1222 566 258 0 8 chr15 83539734 83539855 -19955119 - RSINE1 SINE B4 -38 127 8 5 1222 408 299 133 29 chr15 83541353 83541594 -19953380 + L1MB8 LINE L1 5886 6151 -27 5 1222 294 259 69 35 chr15 83541892 83542008 -19952966 - PB1D7 SINE Alu 0 120 1 5 1222 1255 153 50 23 chr15 83543746 83543966 -19951008 - URR1A DNA MER1_type 0 226 1 6 1222 1195 36 0 0 chr15 83544674 83544811 -19950163 - B1_Mus2 SINE Alu -9 138 2 6 1222 1114 181 53 24 chr15 83544834 83545043 -19949931 - B3 SINE B2 0 216 2 6 1222 629 274 100 129 chr15 83545058 83545398 -19949576 + MTE2a LTR MaLR 7 336 -43 6 1222 189 0 0 0 chr15 83545428 83545449 -19949525 + (CAGAA)n Simple_repeat Simple_repeat 5 25 0 6 1222 185 59 59 0 chr15 83546678 83546712 -19948262 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 6 1222 212 252 27 20 chr15 83547206 83547301 -19947673 - L2c LINE L2 -150 3225 3130 6 1222 437 275 11 27 chr15 83547716 83547899 -19947075 + (CAT)n Simple_repeat Simple_repeat 1 180 0 6 1222 485 291 16 70 chr15 83547936 83548121 -19946853 + HAL1-2a_MD LINE L1 2349 2523 -501 6 1222 1018 143 0 0 chr15 83548143 83548290 -19946684 + B1_Mur4 SINE Alu 4 150 0 6 1222 377 123 15 0 chr15 83548313 83548378 -19946596 + (TCCA)n Simple_repeat Simple_repeat 3 68 0 7 1222 252 175 0 0 chr15 83548398 83548438 -19946536 + ID2 SINE ID 44 83 0 7 1222 259 358 208 0 chr15 83548500 83548707 -19946267 - MIR SINE MIR 0 262 13 7 1222 693 281 80 11 chr15 83550010 83550197 -19944777 + ID_B1 SINE B4 2 201 -23 7 1222 764 74 0 9 chr15 83551126 83551235 -19943739 + (TTCC)n Simple_repeat Simple_repeat 3 110 0 7 1222 1477 59 0 11 chr15 83551360 83551549 -19943425 + B2_Mm2 SINE B2 1 187 -8 7 1222 726 221 0 27 chr15 83551560 83551709 -19943265 - B1_Mur3 SINE Alu -2 147 3 7 1222 228 205 0 0 chr15 83551720 83551759 -19943215 - ID_B1 SINE B4 -99 125 87 7 1222 232 316 152 8 chr15 83552567 83552685 -19942289 - MIR SINE MIR -18 244 110 7 1222 546 43 0 0 chr15 83553090 83553159 -19941815 + (TC)n Simple_repeat Simple_repeat 1 69 0 7 1222 214 305 10 21 chr15 83554706 83554803 -19940171 + CT-rich Low_complexity Low_complexity 1 96 0 8 1222 33 0 0 0 chr15 83555099 83555132 -19939842 + GC_rich Low_complexity Low_complexity 1 33 0 8 1222 182 179 0 71 chr15 83555837 83555879 -19939095 - L2c LINE L2 -19 3368 3330 8 1222 360 164 0 0 chr15 83557718 83557785 -19937189 + (TGAA)n Simple_repeat Simple_repeat 4 70 0 8 1222 1037 106 0 0 chr15 83557873 83558024 -19936950 + B2_Mm2 SINE B2 2 152 -43 8 1222 482 31 16 0 chr15 83558024 83558088 -19936886 + (TA)n Simple_repeat Simple_repeat 2 66 0 8 1222 207 100 0 0 chr15 83558109 83558139 -19936835 + (TC)n Simple_repeat Simple_repeat 1 30 0 8 1222 183 279 181 9 chr15 83558355 83558460 -19936514 + MIRb SINE MIR 78 200 -68 8 1222 314 314 64 28 chr15 83559063 83559204 -19935770 - MIRb SINE MIR -73 195 50 8 1222 258 56 0 0 chr15 83559359 83559395 -19935579 + (CCTG)n Simple_repeat Simple_repeat 1 36 0 8 1222 405 0 0 0 chr15 83559790 83559835 -19935139 + (CA)n Simple_repeat Simple_repeat 2 46 0 9 1222 342 0 0 0 chr15 83559835 83559872 -19935102 + (GA)n Simple_repeat Simple_repeat 2 39 0 9 1222 252 158 0 0 chr15 83560052 83560090 -19934884 + polypyrimidine Low_complexity Low_complexity 2 39 0 9 1222 730 161 11 17 chr15 83560091 83560268 -19934706 + C-rich Low_complexity Low_complexity 2 177 0 9 1222 390 292 7 35 chr15 83560642 83560784 -19934190 + GA-rich Low_complexity Low_complexity 4 141 0 9 1222 255 348 62 6 chr15 83561235 83561397 -19933577 + RLTR21 LTR ERVK 1084 1254 -318 9 1222 453 234 0 0 chr15 83561512 83561649 -19933325 + (TG)n Simple_repeat Simple_repeat 2 138 0 9 1222 204 135 154 0 chr15 83561847 83561899 -19933075 - L2b LINE L2 0 3375 3316 9 1222 196 293 27 0 chr15 83562229 83562304 -19932670 - L2 LINE L2 -560 2859 2783 9 1222 954 224 59 10 chr15 83562566 83562769 -19932205 + ID_B1 SINE B4 1 213 -11 9 1222 645 49 0 0 chr15 83562769 83562850 -19932124 + (GAAA)n Simple_repeat Simple_repeat 2 82 0 1 1222 801 186 131 25 chr15 83562960 83562987 -19931987 - RMER10B LTR ERVL -179 219 197 1 1222 405 0 0 0 chr15 83562987 83563032 -19931942 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 1222 801 186 131 25 chr15 83563032 83563202 -19931772 - RMER10B LTR ERVL -202 196 1 1 1222 268 280 79 8 chr15 83563401 83563527 -19931447 + L1M5 LINE L1 5432 5566 -558 1 1222 261 0 0 0 chr15 83563653 83563682 -19931292 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 1222 551 204 212 0 chr15 83563686 83563818 -19931156 - B3A SINE B2 -30 168 9 1 1222 3405 33 2 24 chr15 83563855 83564264 -19930710 + MTB LTR MaLR 1 400 0 1 1222 252 308 12 37 chr15 83564385 83564466 -19930508 - ID4_ SINE ID -1 82 4 1 1222 202 280 0 13 chr15 83564998 83565074 -19929900 + CT-rich Low_complexity Low_complexity 1 75 0 1 1222 411 302 69 29 chr15 83565731 83565905 -19929069 - MIR SINE MIR -1 261 81 1 1222 396 0 0 0 chr15 83566360 83566404 -19928570 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1222 360 0 0 0 chr15 83566404 83566444 -19928530 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 1222 210 348 87 0 chr15 83567122 83567214 -19927760 - MIR SINE MIR -69 139 40 1 1222 378 0 0 0 chr15 83567325 83567367 -19927607 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1222 538 268 7 21 chr15 83567445 83567586 -19927388 - ID_B1 SINE B4 0 224 86 1 1222 447 260 211 22 chr15 83567737 83567971 -19927003 + B4A SINE B4 9 286 -6 1 1222 741 157 0 0 chr15 83567989 83568161 -19926813 + (CA)n Simple_repeat Simple_repeat 1 172 0 1 1222 1008 136 0 0 chr15 83568172 83568883 -19926091 + (CA)n Simple_repeat Simple_repeat 1 711 0 1 1222 867 137 0 0 chr15 83568914 83569089 -19925885 + (CA)n Simple_repeat Simple_repeat 2 176 0 1 1222 966 122 0 0 chr15 83569101 83569281 -19925693 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1222 792 151 0 0 chr15 83569292 83569471 -19925503 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 1222 204 167 0 0 chr15 83569483 83569531 -19925443 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1222 312 361 71 20 chr15 83569559 83569757 -19925217 + L1M5 LINE L1 5614 5821 -303 1 1222 525 104 0 0 chr15 83569858 83569935 -19925039 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 1 1222 392 223 138 0 chr15 83569998 83570092 -19924882 - PB1D10 SINE Alu 0 117 11 1 1222 265 261 20 102 chr15 83570024 83570122 -19924852 - B4A SINE B4 -130 162 73 1 1222 337 236 130 91 chr15 83570125 83570279 -19924695 - RSINE1 SINE B4 -2 163 4 1 1222 1392 83 4 6 chr15 83570319 83570803 -19924171 + (TTTC)n Simple_repeat Simple_repeat 1 483 0 1 1222 224 272 72 12 chr15 83570816 83570898 -19924076 - ID4 SINE ID -55 97 11 1 1222 288 0 0 0 chr15 83570898 83570930 -19924044 + (CCCCAG)n Simple_repeat Simple_repeat 2 33 0 1 1222 417 212 10 48 chr15 83570936 83571040 -19923934 - PB1D10 SINE Alu -9 108 9 1 1222 317 322 37 74 chr15 83571425 83571640 -19923334 - L1M5 LINE L1 -1052 5088 4882 1 1222 802 207 7 0 chr15 83572219 83572364 -19922610 - RSINE1 SINE B4 -17 148 3 1 1222 578 205 15 4 chr15 83572771 83573038 -19921936 + (TCTG)n Simple_repeat Simple_repeat 1 270 0 1 1222 557 184 0 109 chr15 83573131 83573259 -19921715 - PB1D10 SINE Alu -3 114 1 1 1222 342 338 91 48 chr15 83573491 83573721 -19921253 + MER82 DNA MER2_type 230 469 -184 1 1222 1086 140 0 0 chr15 83574455 83574686 -19920288 + (TG)n Simple_repeat Simple_repeat 1 231 0 1 1222 507 276 61 33 chr15 83574704 83574884 -19920090 - B4A SINE B4 -10 282 98 1 1222 198 0 0 0 chr15 83574913 83574935 -19920039 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1 1222 760 192 20 14 chr15 83574935 83575077 -19919897 - B1_Mur3 SINE Alu -5 144 1 1 1222 294 29 0 0 chr15 83575090 83575125 -19919849 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1222 569 147 87 19 chr15 83575125 83575229 -19919745 - PB1D9 SINE Alu -9 111 1 1 1222 290 125 0 67 chr15 83575229 83575277 -19919697 - B1_Mus2 SINE Alu -99 48 2 1 1222 312 161 0 0 chr15 83575277 83575325 -19919649 - B1_Mus2 SINE Alu -99 48 1 1 1222 334 143 0 0 chr15 83575325 83575373 -19919601 - B1_Mus2 SINE Alu -99 48 1 1 1222 312 161 0 0 chr15 83575373 83575421 -19919553 - B1_Mus2 SINE Alu -99 48 1 1 1222 312 161 0 0 chr15 83575421 83575469 -19919505 - B1_Mus2 SINE Alu -99 48 1 1 1222 312 161 0 0 chr15 83575469 83575517 -19919457 - B1_Mus2 SINE Alu -99 48 1 1 1222 330 161 0 0 chr15 83575517 83575565 -19919409 - B1_Mus2 SINE Alu -99 48 1 1 1222 312 161 0 0 chr15 83575565 83575613 -19919361 - B1_Mus2 SINE Alu -99 48 1 1 1222 312 161 0 0 chr15 83575613 83575661 -19919313 - B1_Mus2 SINE Alu -99 48 1 1 1222 316 161 0 0 chr15 83575661 83575709 -19919265 - B1_Mus2 SINE Alu -99 48 1 1 1222 312 161 0 0 chr15 83575709 83575757 -19919217 - B1_Mus2 SINE Alu -99 48 1 1 1222 308 146 18 0 chr15 83575757 83575804 -19919170 - PB1D9 SINE Alu -72 48 1 1 1222 312 161 0 0 chr15 83575804 83575852 -19919122 - B1_Mus2 SINE Alu -99 48 1 1 1222 278 164 18 0 chr15 83575852 83575899 -19919075 - B1_Mus2 SINE Alu -99 48 1 1 1222 334 143 0 0 chr15 83575899 83575947 -19919027 - B1_Mus2 SINE Alu -99 48 1 1 1222 334 143 0 0 chr15 83575947 83575995 -19918979 - B1_Mus2 SINE Alu -99 48 1 1 1222 334 143 0 0 chr15 83575995 83576043 -19918931 - B1_Mus2 SINE Alu -99 48 1 1 1222 341 125 0 0 chr15 83576043 83576091 -19918883 - B1_Mus2 SINE Alu -99 48 1 1 1222 327 320 36 101 chr15 83576091 83576223 -19918751 - B4A SINE B4 -159 133 11 1 1222 360 361 42 6 chr15 83576251 83576418 -19918556 + HAL1-2a_MD LINE L1 2335 2507 -517 1 1222 402 21 0 0 chr15 83577286 83577333 -19917641 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 1222 310 253 0 0 chr15 83577334 83577413 -19917561 - BC1_Mm scRNA scRNA -55 97 19 1 1222 341 93 0 18 chr15 83577420 83577475 -19917499 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1222 406 221 0 69 chr15 83577638 83577740 -19917234 - B2_Mm2 SINE B2 -99 96 2 1 1222 186 103 0 0 chr15 83577756 83577785 -19917189 + (TTCC)n Simple_repeat Simple_repeat 2 30 0 1 1222 268 360 22 0 chr15 83578760 83578899 -19916075 + L1M1 LINE L1 5748 5889 -411 1 1222 437 291 33 88 chr15 83578899 83578920 -19916054 + B4A SINE B4 78 154 -138 1 1222 1055 36 7 0 chr15 83578920 83579057 -19915917 + B1_Mus2 SINE Alu 10 147 0 1 1222 437 291 33 88 chr15 83579057 83579080 -19915894 + B4A SINE B4 155 248 -44 1 1222 459 0 0 0 chr15 83579134 83579185 -19915789 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1222 201 39 0 0 chr15 83579288 83579314 -19915660 + (G)n Simple_repeat Simple_repeat 1 26 0 1 1222 228 122 0 0 chr15 83579324 83579365 -19915609 + (CGA)n Simple_repeat Simple_repeat 3 43 0 1 1222 300 298 0 0 chr15 83579921 83580005 -19914969 - PB1D10 SINE Alu -12 105 22 1 1222 890 271 60 29 chr15 83580158 83580314 -19914660 + B4 SINE B4 1 161 -131 1 1222 387 60 0 0 chr15 83580314 83580364 -19914610 + (CAGC)n Simple_repeat Simple_repeat 4 53 0 1 1222 890 271 60 29 chr15 83580364 83580488 -19914486 + B4 SINE B4 162 290 -2 1 1222 473 354 19 40 chr15 83580550 83580871 -19914103 + L1MEe LINE L1 1608 1921 -4245 1 1222 569 230 40 13 chr15 83580937 83581087 -19913887 + RSINE1 SINE B4 3 156 -9 1 1222 1330 19 0 12 chr15 83581198 83581358 -19913616 - L1Md_F2 LINE L1 -11 6571 6414 1 1222 394 243 106 10 chr15 83581393 83581497 -19913477 + PB1D10 SINE Alu 3 116 -1 1 1222 335 186 0 0 chr15 83581609 83581668 -19913306 + tRNA-Ala-GCY_ tRNA tRNA 6 64 -11 1 1222 264 267 27 0 chr15 83581668 83581684 -19913290 + ID SINE ID 12 88 -136 1 1222 379 264 33 11 chr15 83581704 83581796 -19913178 + B4 SINE B4 2 95 -197 1 1222 1025 110 14 0 chr15 83581796 83581942 -19913032 + B1_Mus1 SINE Alu 1 148 0 1 1222 553 271 66 61 chr15 83581955 83582167 -19912807 + B4 SINE B4 80 292 0 1 1222 620 111 10 0 chr15 83582184 83582283 -19912691 + (GA)n Simple_repeat Simple_repeat 1 100 0 1 1222 331 284 12 0 chr15 83582338 83582419 -19912555 + ID4_ SINE ID 2 83 0 1 1222 403 336 0 0 chr15 83582419 83582544 -19912430 + (TG)n Simple_repeat Simple_repeat 2 126 0 1 1222 271 355 9 0 chr15 83582550 83582657 -19912317 + L1MEe LINE L1 2350 2457 -3689 1 1222 685 344 108 3 chr15 83582658 83582964 -19912010 - MER2 DNA MER2_type -5 340 3 1 1222 198 0 0 0 chr15 83583295 83583317 -19911657 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 1222 646 261 30 24 chr15 83583349 83583518 -19911456 - B4 SINE B4 -48 244 75 1 1222 249 271 127 0 chr15 83583747 83583865 -19911109 - LTR16A LTR ERVL -318 133 1 1 1222 335 383 42 18 chr15 83584003 83584168 -19910806 + L1MEe LINE L1 3719 3887 -2259 1 1222 238 281 48 24 chr15 83584234 83584318 -19910656 + PB1D7 SINE Alu 29 114 -6 1 1222 556 276 0 0 chr15 83584327 83584450 -19910524 + B3A SINE B2 3 125 -73 1 1222 275 0 29 0 chr15 83584455 83584490 -19910484 + (TC)n Simple_repeat Simple_repeat 1 36 0 1 1222 354 291 120 0 chr15 83584777 83584894 -19910080 + L1MEe LINE L1 4205 4335 -1811 1 1222 747 238 80 7 chr15 83584898 83585104 -19909870 - B3A SINE B2 0 216 1 1 1222 382 276 17 8 chr15 83585173 83585290 -19909684 + L1MB3 LINE L1 6054 6171 -12 1 1222 423 304 8 23 chr15 83585366 83585494 -19909480 + B1F1 SINE Alu 1 126 -23 1 1222 204 67 0 0 chr15 83585846 83585876 -19909098 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 1222 276 53 0 0 chr15 83586197 83586235 -19908739 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 1222 330 26 0 0 chr15 83586235 83586274 -19908700 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1222 655 278 81 33 chr15 83586324 83586596 -19908378 - B4A SINE B4 -7 285 1 1 1222 263 326 0 33 chr15 83586683 83586775 -19908199 + MLT1A0 LTR MaLR 257 345 -20 1 1222 646 324 60 30 chr15 83588220 83588487 -19906487 + MT2A LTR ERVL 188 462 -71 1 1222 455 181 0 103 chr15 83588488 83588605 -19906369 + MT2B LTR ERVL 160 264 -337 1 1222 1088 14 0 21 chr15 83588501 83588643 -19906331 + B1_Mm SINE Alu 9 147 0 1 1222 282 141 0 0 chr15 83588650 83588701 -19906273 + MT2A LTR ERVL 488 561 -1 1 1222 250 235 0 0 chr15 83588836 83588887 -19906087 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1222 305 34 16 48 chr15 83589475 83589537 -19905437 + (CAAAAA)n Simple_repeat Simple_repeat 2 61 0 2 1222 191 36 36 0 chr15 83589608 83589636 -19905338 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1222 190 274 39 0 chr15 83589725 83589776 -19905198 + MIRm SINE MIR 86 138 -138 2 1222 396 0 0 0 chr15 83589788 83589832 -19905142 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1222 182 229 279 77 chr15 83589994 83590098 -19904876 + MIR SINE MIR 114 238 -24 2 1222 660 249 89 17 chr15 83591572 83591752 -19903222 + B4 SINE B4 94 286 -6 2 1222 219 220 0 0 chr15 83591967 83592017 -19902957 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1222 238 204 0 36 chr15 83592511 83592567 -19902407 + C-rich Low_complexity Low_complexity 1 54 0 2 1222 193 242 271 75 chr15 83593087 83593194 -19901780 + MIR SINE MIR 114 241 -21 2 1222 673 277 82 19 chr15 83593282 83593488 -19901486 - B4 SINE B4 -22 270 52 2 1222 321 26 0 0 chr15 83593575 83593613 -19901361 + (TATG)n Simple_repeat Simple_repeat 2 39 0 2 1222 366 235 37 0 chr15 83593645 83593726 -19901248 - B3 SINE B2 -127 89 6 2 1222 510 287 101 34 chr15 83594370 83594637 -19900337 + B4 SINE B4 1 285 -7 2 1222 300 191 72 14 chr15 83594731 83594800 -19900174 - ID4 SINE ID -8 75 3 2 1222 333 0 0 0 chr15 83595264 83595301 -19899673 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1222 222 214 17 67 chr15 83595526 83595586 -19899388 + ID4 SINE ID 23 79 -4 2 1222 676 216 0 13 chr15 83595610 83595848 -19899126 + GA-rich Low_complexity Low_complexity 1 234 0 2 1222 194 296 0 18 chr15 83596567 83596622 -19898352 - L2b LINE L2 -26 3349 3296 2 1222 858 278 21 90 chr15 83597443 83597732 -19897242 + B4 SINE B4 9 277 -15 2 1222 438 20 0 0 chr15 83597759 83597810 -19897164 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1222 201 229 0 0 chr15 83598696 83598744 -19896230 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1222 2463 142 102 19 chr15 83598758 83599161 -19895813 + RLTR11A LTR ERVK 18 458 -70 2 1222 224 30 30 0 chr15 83599161 83599194 -19895780 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1222 2463 142 102 19 chr15 83599194 83599262 -19895712 + RLTR11A LTR ERVK 459 527 -1 2 1222 237 196 0 0 chr15 83599304 83599355 -19895619 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1222 1608 211 121 5 chr15 83601488 83601860 -19893114 - MTD LTR MaLR -2 417 3 2 1222 271 260 62 0 chr15 83603731 83603827 -19891147 + MER117 DNA MER1_type 50 151 -46 2 1222 262 267 0 16 chr15 83603850 83603911 -19891063 + polypyrimidine Low_complexity Low_complexity 2 61 0 2 1222 243 250 0 0 chr15 83605810 83605878 -19889096 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 1222 462 75 0 0 chr15 83606368 83606435 -19888539 + (TC)n Simple_repeat Simple_repeat 1 67 0 2 1222 561 15 0 0 chr15 83606759 83606825 -19888149 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 1222 372 61 49 39 chr15 83607541 83607643 -19887331 + (TCTA)n Simple_repeat Simple_repeat 1 103 0 2 1222 460 248 156 44 chr15 83607643 83607778 -19887196 - RSINE1 SINE B4 -13 152 3 2 1222 209 364 91 0 chr15 83607853 83607963 -19887011 - MIR3 SINE MIR -51 157 38 2 1222 191 182 0 0 chr15 83608764 83608797 -19886177 + MIRb SINE MIR 222 254 -14 2 1222 51 86 0 0 chr15 83610146 83610274 -19884700 + GC_rich Low_complexity Low_complexity 1 128 0 2 1222 180 167 14 27 chr15 83610302 83610376 -19884598 + (CGGGG)n Simple_repeat Simple_repeat 1 73 0 2 1222 36 77 0 0 chr15 83610422 83610500 -19884474 + GC_rich Low_complexity Low_complexity 1 78 0 2 1222 224 206 0 76 chr15 83610530 83610609 -19884365 + (CCGGG)n Simple_repeat Simple_repeat 3 75 0 2 1222 23 0 0 0 chr15 83610623 83610646 -19884328 + GC_rich Low_complexity Low_complexity 1 23 0 2 1222 28 99 0 0 chr15 83610673 83610764 -19884210 + GC_rich Low_complexity Low_complexity 1 91 0 2 1222 230 192 39 0 chr15 83611013 83611065 -19883909 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 2 1222 287 65 0 21 chr15 83613808 83613855 -19881119 + (CAAA)n Simple_repeat Simple_repeat 4 49 0 2 1222 219 175 0 0 chr15 83614006 83614063 -19880911 + CT-rich Low_complexity Low_complexity 1 57 0 2 1222 29 28 0 0 chr15 83615815 83615851 -19879123 + AT_rich Low_complexity Low_complexity 1 36 0 2 1222 501 319 12 6 chr15 83616039 83616200 -19878774 - RSINE1 SINE B4 -2 163 2 2 1222 244 64 43 0 chr15 83616236 83616283 -19878691 + (TTTTTG)n Simple_repeat Simple_repeat 1 49 0 2 1222 209 104 19 77 chr15 83616318 83616370 -19878604 + T-rich Low_complexity Low_complexity 6 54 0 2 1222 588 189 0 0 chr15 83617614 83617757 -19877217 + (TCCA)n Simple_repeat Simple_repeat 2 144 0 2 1222 199 248 9 26 chr15 83617776 83617892 -19877082 + (TCCA)n Simple_repeat Simple_repeat 1 114 0 2 1222 347 0 23 0 chr15 83618999 83619042 -19875932 + (TCTA)n Simple_repeat Simple_repeat 3 46 0 2 1222 270 160 0 0 chr15 83619111 83619161 -19875813 + CT-rich Low_complexity Low_complexity 3 52 0 2 1222 420 20 0 0 chr15 83619654 83619703 -19875271 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1222 380 55 18 0 chr15 83619916 83619971 -19875003 + (TCCA)n Simple_repeat Simple_repeat 4 59 0 2 1222 244 264 0 65 chr15 83620025 83620102 -19874872 - MIRb SINE MIR -8 260 189 2 1222 184 216 54 0 chr15 83620401 83620475 -19874499 + CT-rich Low_complexity Low_complexity 1 78 0 2 1222 676 200 33 4 chr15 83620528 83620697 -19874277 - B3 SINE B2 0 198 14 2 1222 250 300 123 58 chr15 83620690 83620828 -19874146 - B4 SINE B4 -77 215 69 2 1222 261 75 0 0 chr15 83620828 83620868 -19874106 + (T)n Simple_repeat Simple_repeat 1 40 0 2 1222 241 202 43 0 chr15 83620875 83620945 -19874029 - B1F SINE Alu -71 78 2 2 1222 280 132 0 42 chr15 83621296 83621367 -19873607 + A-rich Low_complexity Low_complexity 3 70 0 2 1222 228 148 44 33 chr15 83623012 83623103 -19871871 + G-rich Low_complexity Low_complexity 3 94 0 2 1223 184 319 27 14 chr15 83624664 83624737 -19870237 + MIR SINE MIR 89 162 -100 2 1223 21 57 0 0 chr15 83625332 83625367 -19869607 + AT_rich Low_complexity Low_complexity 1 35 0 2 1223 282 305 0 0 chr15 83626080 83626244 -19868730 + (TG)n Simple_repeat Simple_repeat 1 164 0 2 1223 525 227 159 105 chr15 83626305 83626581 -19868393 - B4 SINE B4 0 292 2 2 1223 261 190 51 17 chr15 83627312 83627371 -19867603 + MIRc SINE MIR 91 151 -117 2 1223 535 151 25 25 chr15 83627797 83627960 -19867014 + (TG)n Simple_repeat Simple_repeat 2 164 0 2 1223 743 134 0 38 chr15 83627971 83628157 -19866817 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 1223 594 219 129 118 chr15 83629923 83630242 -19864732 - MTEa LTR MaLR -44 335 1 2 1223 258 32 0 0 chr15 83630695 83630726 -19864248 + (CCCTG)n Simple_repeat Simple_repeat 5 35 0 2 1223 258 32 0 0 chr15 83630953 83630984 -19863990 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 2 1223 257 171 0 0 chr15 83632301 83632342 -19862632 + (CTAGGG)n Simple_repeat Simple_repeat 2 42 0 2 1223 531 31 0 0 chr15 83632421 83632486 -19862488 + (GA)n Simple_repeat Simple_repeat 1 65 0 2 1223 506 309 58 1 chr15 83632507 83632714 -19862260 - MIR SINE MIR -16 252 20 2 1223 402 21 0 0 chr15 83634527 83634574 -19860400 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1223 701 277 51 59 chr15 83636862 83637115 -19857859 + Lx8 LINE L1 7072 7322 -151 2 1223 189 74 0 0 chr15 83637129 83637156 -19857818 + (CAAG)n Simple_repeat Simple_repeat 2 28 0 2 1223 255 157 0 0 chr15 83637154 83637205 -19857769 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 2 1223 321 269 35 53 chr15 83637675 83637789 -19857185 - RSINE1 SINE B4 -40 125 14 2 1223 378 0 0 0 chr15 83638231 83638273 -19856701 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1223 928 253 49 12 chr15 83639989 83640233 -19854741 - MTEa LTR MaLR 0 379 127 2 1223 640 252 42 0 chr15 83640450 83640593 -19854381 - MTEa LTR MaLR -228 151 3 2 1223 229 254 0 0 chr15 83641039 83641094 -19853880 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1223 805 160 11 11 chr15 83641099 83641276 -19853698 + (TATG)n Simple_repeat Simple_repeat 2 178 0 2 1223 192 200 0 0 chr15 83641267 83641307 -19853667 + (CATATA)n Simple_repeat Simple_repeat 3 42 0 2 1223 470 239 6 0 chr15 83641307 83641483 -19853491 + (TG)n Simple_repeat Simple_repeat 2 178 0 2 1223 241 218 19 19 chr15 83641470 83641573 -19853401 + (TATG)n Simple_repeat Simple_repeat 4 106 0 2 1223 216 97 0 0 chr15 83641607 83641638 -19853336 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1223 284 267 26 8 chr15 83641651 83641768 -19853206 + (TG)n Simple_repeat Simple_repeat 1 119 0 2 1223 471 278 146 31 chr15 83641775 83641970 -19853004 - B4 SINE B4 -2 290 70 2 1223 585 42 0 0 chr15 83641970 83642042 -19852932 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 1223 471 278 146 31 chr15 83642042 83642106 -19852868 - B4 SINE B4 -223 69 3 2 1223 352 256 11 0 chr15 83642195 83642285 -19852689 - RSINE1 SINE B4 -70 95 5 2 1223 266 257 155 60 chr15 83642291 83642407 -19852567 - PB1 SINE Alu 0 127 1 2 1223 636 261 83 5 chr15 83642563 83642756 -19852218 + MER3 DNA MER1_type 2 209 0 2 1223 185 267 0 22 chr15 83643063 83643109 -19851865 - MIRb SINE MIR -106 162 118 2 1223 1207 163 19 0 chr15 83643219 83643428 -19851546 - URR1B DNA MER1_type 0 225 13 2 1223 187 196 0 61 chr15 83643583 83643632 -19851342 + MIR SINE MIR 70 115 -147 2 1223 1098 266 26 130 chr15 83644965 83645388 -19849586 + MTE2a LTR MaLR 1 379 0 2 1223 207 273 18 0 chr15 83645864 83645919 -19849055 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1223 391 268 12 0 chr15 83645921 83646089 -19848885 + (CATG)n Simple_repeat Simple_repeat 1 170 0 2 1223 843 191 78 10 chr15 83646117 83646323 -19848651 - B4A SINE B4 -72 220 1 2 1223 21 36 0 0 chr15 83646637 83646665 -19848309 + AT_rich Low_complexity Low_complexity 1 28 0 2 1223 443 259 241 0 chr15 83646741 83646915 -19848059 - ID_B1 SINE B4 -8 216 1 2 1223 373 316 0 26 chr15 83646926 83647043 -19847931 - PB1D10 SINE Alu 0 117 4 2 1223 619 280 0 7 chr15 83647063 83647207 -19847767 - ID_B1 SINE B4 -1 223 81 3 1223 373 286 51 36 chr15 83647299 83647437 -19847537 - MLT1B LTR MaLR -70 320 181 3 1223 484 272 86 22 chr15 83647669 83647891 -19847083 - MLT1B LTR MaLR -139 251 16 3 1223 491 291 10 38 chr15 83648111 83648270 -19846704 - MLT1C LTR MaLR 0 624 330 3 1223 702 319 96 85 chr15 83648502 83648815 -19846159 - L1M4 LINE L1 -1966 4180 3846 3 1223 1152 68 0 0 chr15 83648815 83648962 -19846012 - B1_Mus2 SINE Alu 0 147 1 3 1223 702 319 96 85 chr15 83648962 83649073 -19845901 - L1M4 LINE L1 -2301 3845 3753 3 1223 670 284 5 15 chr15 83649073 83649119 -19845855 - B3A SINE B2 0 198 156 3 1223 270 0 0 0 chr15 83649119 83649149 -19845825 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1223 670 284 5 15 chr15 83649149 83649302 -19845672 - B3A SINE B2 -43 155 2 3 1223 702 319 96 85 chr15 83649302 83649465 -19845509 - L1M4 LINE L1 -2394 3752 3585 3 1223 2276 127 68 10 chr15 83649465 83649862 -19845112 - MTC LTR MaLR 0 421 2 3 1223 702 319 96 85 chr15 83649862 83649932 -19845042 - L1M4 LINE L1 -2562 3584 3514 3 1223 412 288 23 29 chr15 83649927 83650102 -19844872 - L1M4 LINE L1 -3732 2414 2241 3 1223 416 251 20 6 chr15 83650107 83650216 -19844758 + B1F SINE Alu 1 108 -12 3 1223 288 70 0 0 chr15 83650216 83650259 -19844715 + (CAAT)n Simple_repeat Simple_repeat 1 43 0 3 1223 409 256 16 49 chr15 83650259 83650272 -19844702 + PB1D9 SINE Alu 109 119 -1 3 1223 325 270 84 67 chr15 83650274 83650393 -19844581 - L1M4 LINE L1 -3907 2239 2119 3 1223 311 288 155 14 chr15 83650514 83650662 -19844312 - L1M2 LINE L1 -661 5642 5474 3 1223 487 154 8 154 chr15 83650693 83650816 -19844158 - B1_Mus1 SINE Alu -21 127 23 3 1223 308 229 9 54 chr15 83650911 83651022 -19843952 - L1M2 LINE L1 -676 5480 5375 3 1223 351 273 166 42 chr15 83651097 83651338 -19843636 - B4A SINE B4 -18 274 4 3 1223 421 305 61 19 chr15 83651359 83651573 -19843401 - L1M2 LINE L1 -776 5367 5145 3 1223 962 266 29 9 chr15 83651657 83651972 -19843002 - L1M2 LINE L1 -1273 4870 4550 3 1223 419 301 189 41 chr15 83651974 83652217 -19842757 + B4A SINE B4 2 280 -12 3 1223 1558 310 39 106 chr15 83652297 83652593 -19842381 - L1M2 LINE L1 -1538 4608 4347 3 1223 567 29 0 0 chr15 83652593 83652662 -19842312 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 1223 2232 303 30 38 chr15 83652662 83652691 -19842283 - L1M2 LINE L1 -1800 4346 4319 3 1223 259 300 0 0 chr15 83652691 83652751 -19842223 - RSINE1 SINE B4 -102 63 4 3 1223 2232 303 30 38 chr15 83652751 83653415 -19841559 - L1M2 LINE L1 -1800 4318 3657 3 1223 2071 169 2 53 chr15 83653415 83653809 -19841165 - ORR1C1 LTR MaLR 0 378 5 3 1223 2232 303 30 37 chr15 83653809 83654125 -19840849 - L1M2 LINE L1 -2487 3659 3334 3 1223 328 174 131 8 chr15 83654134 83654256 -19840718 - L1M2 LINE L1 -2925 3218 3082 3 1223 275 322 81 19 chr15 83654284 83654493 -19840481 + L1M2 LINE L1 2592 2813 -3330 3 1223 467 261 261 17 chr15 83654683 83654917 -19840057 - B4 SINE B4 0 292 2 3 1223 366 252 106 10 chr15 83654917 83655021 -19839953 + L1M2 LINE L1 2979 3092 -3051 3 1223 705 172 13 76 chr15 83655238 83655276 -19839698 - ID_B1 SINE B4 0 224 191 3 1223 962 216 102 69 chr15 83655276 83655639 -19839335 - MTE2a LTR MaLR -4 375 1 3 1223 705 172 13 76 chr15 83655639 83655757 -19839217 - ID_B1 SINE B4 -34 190 78 3 1223 1311 211 206 13 chr15 83655989 83656110 -19838864 - Lx9 LINE L1 -8 7636 7477 3 1223 576 42 0 0 chr15 83656110 83656181 -19838793 + (TA)n Simple_repeat Simple_repeat 2 72 0 3 1223 1311 211 206 13 chr15 83656181 83656297 -19838677 - Lx9 LINE L1 -168 7476 7320 3 1223 342 0 0 0 chr15 83656297 83656335 -19838639 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1223 410 0 20 0 chr15 83656335 83656384 -19838590 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 1223 1311 211 206 13 chr15 83656384 83656596 -19838378 - Lx9 LINE L1 -325 7319 7101 3 1223 1496 164 161 19 chr15 83657925 83658285 -19836689 + MTD LTR MaLR 1 411 -8 3 1223 236 304 25 0 chr15 83658924 83659003 -19835971 + MER74A LTR ERVL 69 149 -473 3 1223 366 327 113 21 chr15 83659020 83659304 -19835670 + MER74A LTR ERVL 153 462 -96 3 1223 1362 151 67 0 chr15 83660625 83660864 -19834110 + ORR1C1 LTR MaLR 113 367 -11 3 1223 21 0 0 0 chr15 83661075 83661096 -19833878 + GC_rich Low_complexity Low_complexity 1 21 0 3 1223 222 352 11 0 chr15 83662029 83662117 -19832857 + (CCCA)n Simple_repeat Simple_repeat 3 91 0 3 1223 240 86 0 0 chr15 83662138 83662173 -19832801 + (CAGC)n Simple_repeat Simple_repeat 4 38 0 3 1223 534 227 0 0 chr15 83662176 83662308 -19832666 + (TCCA)n Simple_repeat Simple_repeat 2 133 0 3 1223 315 0 0 0 chr15 83662327 83662362 -19832612 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 1223 241 318 49 49 chr15 83663814 83663976 -19830998 - MER102b DNA MER1_type -179 162 1 3 1223 692 234 29 0 chr15 83664535 83664706 -19830268 - B3A SINE B2 -22 176 1 3 1223 264 267 0 0 chr15 83664831 83664891 -19830083 + GA-rich Low_complexity Low_complexity 6 65 0 3 1223 270 0 0 0 chr15 83664926 83664956 -19830018 + (TC)n Simple_repeat Simple_repeat 1 30 0 3 1223 369 0 0 0 chr15 83665573 83665614 -19829360 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1223 756 238 5 84 chr15 83665614 83665816 -19829158 - B4 SINE B4 -23 269 84 3 1223 201 213 0 0 chr15 83665821 83665868 -19829106 + (CAG)n Simple_repeat Simple_repeat 1 47 0 3 1223 306 0 0 0 chr15 83666118 83666152 -19828822 + (TTTG)n Simple_repeat Simple_repeat 4 37 0 3 1223 227 286 47 16 chr15 83666159 83666223 -19828751 - RMER30 DNA MER1_type -129 73 8 3 1223 348 248 53 35 chr15 83667045 83667158 -19827816 + MIR SINE MIR 34 148 -60 3 1223 189 0 0 0 chr15 83667197 83667218 -19827756 + (TA)n Simple_repeat Simple_repeat 2 22 0 3 1223 242 269 51 0 chr15 83667233 83667311 -19827663 - MIRc SINE MIR -104 164 83 3 1223 623 232 32 6 chr15 83667722 83667878 -19827096 - HAL1-2a_MD LINE L1 -509 2515 2356 3 1223 845 80 22 33 chr15 83668615 83668796 -19826178 + (CA)n Simple_repeat Simple_repeat 2 180 0 3 1223 220 376 83 28 chr15 83668866 83669011 -19825963 + MIRc SINE MIR 40 192 -76 3 1223 271 270 97 18 chr15 83671413 83671526 -19823448 - MTC LTR MaLR -299 122 1 3 1223 274 255 71 54 chr15 83671721 83671833 -19823141 - B4A SINE B4 -177 115 2 3 1223 347 244 12 25 chr15 83672081 83672161 -19822813 - ID4 SINE ID -2 81 3 3 1223 611 48 12 0 chr15 83673365 83673448 -19821526 + (GA)n Simple_repeat Simple_repeat 2 85 0 3 1223 390 21 0 0 chr15 83674792 83674839 -19820135 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1223 342 129 0 0 chr15 83676116 83676178 -19818796 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 1223 257 0 30 0 chr15 83676212 83676245 -19818729 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1223 184 231 0 0 chr15 83676787 83676826 -19818148 + MIRc SINE MIR 113 151 -117 3 1223 354 23 0 0 chr15 83677735 83677778 -19817196 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1223 378 331 5 38 chr15 83680471 83680656 -19814318 + (ATGGTG)n Simple_repeat Simple_repeat 1 179 0 3 1223 282 331 0 8 chr15 83680639 83680761 -19814213 + (TGG)n Simple_repeat Simple_repeat 1 121 0 3 1223 272 235 58 14 chr15 83680885 83680954 -19814020 - MIR SINE MIR -163 99 28 3 1223 458 171 12 67 chr15 83680977 83681221 -19813753 + G-rich Low_complexity Low_complexity 1 230 0 3 1223 237 314 12 0 chr15 83682850 83682936 -19812038 + (CAGCC)n Simple_repeat Simple_repeat 4 90 0 3 1223 248 301 0 24 chr15 83683203 83683288 -19811686 + CT-rich Low_complexity Low_complexity 2 84 0 3 1223 1027 134 9 0 chr15 83683293 83683529 -19811445 + (TCCA)n Simple_repeat Simple_repeat 1 238 0 3 1223 586 241 167 0 chr15 83684233 83684407 -19810567 - ID_B1 SINE B4 -21 203 1 3 1223 261 339 11 38 chr15 83685786 83685970 -19809004 + (ATGGTG)n Simple_repeat Simple_repeat 2 180 0 3 1223 447 330 5 60 chr15 83685973 83686173 -19808801 - HAL1-2a_MD LINE L1 -502 2522 2334 3 1223 259 394 47 24 chr15 83686410 83686579 -19808395 - MIR SINE MIR 0 262 90 3 1223 448 280 40 40 chr15 83687891 83688066 -19806908 - MER96B DNA hAT -242 175 1 3 1223 363 339 72 6 chr15 83688086 83688267 -19806707 - MIRb SINE MIR -57 211 19 3 1223 198 167 0 0 chr15 83689359 83689395 -19805579 + (TCCA)n Simple_repeat Simple_repeat 3 38 0 3 1223 294 353 18 0 chr15 83689438 83689608 -19805366 + (TCCA)n Simple_repeat Simple_repeat 3 175 0 3 1223 337 268 124 16 chr15 83690301 83690430 -19804544 - B4A SINE B4 -149 143 1 3 1223 665 200 17 11 chr15 83690569 83690746 -19804228 + CT-rich Low_complexity Low_complexity 1 178 0 3 1223 2107 111 101 16 chr15 83691235 83691603 -19803371 + MTB_Mm LTR MaLR 1 399 -8 3 1223 230 277 23 3 chr15 83691610 83691694 -19803280 - L1M2 LINE L1 -1266 4880 4794 3 1223 326 0 68 0 chr15 83691836 83691880 -19803094 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 3 1223 1150 51 0 0 chr15 83691880 83692017 -19802957 - B1_Mm SINE Alu -10 137 1 3 1223 784 236 5 43 chr15 83692090 83692276 -19802698 + B3A SINE B2 13 191 -7 3 1223 534 189 5 233 chr15 83692292 83692391 -19802583 - B1_Mur1 SINE Alu 0 149 66 3 1223 3323 140 24 9 chr15 83692391 83692925 -19802049 + Lx2B LINE L1 6458 6999 -1 3 1223 534 189 5 233 chr15 83692925 83693018 -19801956 - B1_Mur1 SINE Alu -84 65 1 3 1223 219 364 0 11 chr15 83693414 83693503 -19801471 + (TG)n Simple_repeat Simple_repeat 1 88 0 3 1223 768 296 70 7 chr15 83693506 83693778 -19801196 - B4A SINE B4 -3 289 1 3 1223 2519 127 29 17 chr15 83694131 83694539 -19800435 + MTC LTR MaLR 1 413 -8 3 1223 233 200 278 0 chr15 83694587 83694677 -19800297 - PB1D10 SINE Alu 0 117 3 3 1223 590 251 258 9 chr15 83694726 83694777 -19800197 - B4 SINE B4 -6 286 232 3 1223 420 20 0 0 chr15 83694777 83694826 -19800148 + (TATG)n Simple_repeat Simple_repeat 2 50 0 3 1223 590 251 258 9 chr15 83694826 83695003 -19799971 - B4 SINE B4 -61 231 3 3 1223 190 100 60 0 chr15 83696024 83696074 -19798900 + A-rich Low_complexity Low_complexity 2 54 0 3 1223 1652 164 115 40 chr15 83696638 83697013 -19797961 - MTD LTR MaLR -16 403 1 3 1223 294 261 200 49 chr15 83697786 83697971 -19797003 + MLT1J LTR MaLR 290 502 -10 3 1223 269 182 37 49 chr15 83700373 83700454 -19794520 + PB1D7 SINE Alu 33 112 -8 3 1223 369 0 0 0 chr15 83700601 83700642 -19794332 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1223 189 0 0 0 chr15 83703784 83703805 -19791169 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 1223 194 252 98 29 chr15 83704354 83704456 -19790518 + L2 LINE L2 325 433 -2986 3 1223 271 133 0 0 chr15 83704699 83704744 -19790230 - MTD LTR MaLR 0 419 375 3 1223 1154 45 0 0 chr15 83705854 83705988 -19788986 - B1_Mus1 SINE Alu -13 135 2 3 1223 462 376 21 21 chr15 83706142 83706384 -19788590 + L1M4 LINE L1 2135 2376 -3770 3 1223 344 274 54 7 chr15 83706733 83706880 -19788094 + L1M4 LINE L1 2900 3053 -3093 3 1223 195 295 142 20 chr15 83707142 83707346 -19787628 + L2a LINE L2 2736 2964 -455 3 1223 200 366 73 17 chr15 83707422 83707600 -19787374 + L2a LINE L2 3104 3291 -135 3 1223 1341 292 33 8 chr15 83707880 83708242 -19786732 + MTE2b LTR MaLR 1 371 -8 3 1223 378 302 34 0 chr15 83709559 83709678 -19785296 + B1F2 SINE Alu 1 123 -26 3 1223 294 316 0 12 chr15 83709693 83709773 -19785201 + polypurine Low_complexity Low_complexity 3 81 0 4 1223 229 286 0 45 chr15 83711599 83711665 -19783309 - RSINE1 SINE B4 -60 105 43 4 1223 295 244 57 9 chr15 83711706 83711811 -19783163 - B1F1 SINE Alu 0 117 6 4 1223 771 327 15 34 chr15 83712219 83712482 -19782492 + B4 SINE B4 1 258 -34 4 1223 239 218 0 18 chr15 83712607 83712663 -19782311 + U2 snRNA snRNA 1 55 -133 4 1223 791 214 0 8 chr15 83715142 83715509 -19779465 + (TG)n Simple_repeat Simple_repeat 1 363 0 4 1223 682 280 84 39 chr15 83716221 83716529 -19778445 + ORR1D2 LTR MaLR 3 324 -46 4 1223 397 330 118 5 chr15 83717142 83717337 -19777637 - Tigger12 DNA MER2_type -12 1947 1731 4 1223 255 266 62 25 chr15 83717588 83717669 -19777305 + MIRc SINE MIR 113 196 -72 4 1223 1077 158 113 5 chr15 83719537 83719741 -19775233 + URR1A DNA MER1_type 1 226 0 4 1223 299 302 15 85 chr15 83720232 83720362 -19774612 + B3A SINE B2 77 197 -1 4 1223 976 297 112 21 chr15 83720729 83721047 -19773927 + Lx9 LINE L1 7146 7464 -180 4 1223 203 61 30 0 chr15 83721047 83721080 -19773894 + (TCTCTG)n Simple_repeat Simple_repeat 2 35 0 4 1223 976 297 112 21 chr15 83721080 83721197 -19773777 + Lx9 LINE L1 7465 7621 -23 4 1223 315 341 0 0 chr15 83721343 83721434 -19773540 + B4A SINE B4 202 292 0 4 1223 414 85 0 0 chr15 83721454 83721513 -19773461 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 1223 291 218 25 13 chr15 83722489 83722568 -19772406 + B1F SINE Alu 1 80 -69 4 1223 220 326 0 11 chr15 83723842 83723935 -19771039 + (CAGGG)n Simple_repeat Simple_repeat 5 96 0 4 1223 358 248 0 37 chr15 83725124 83725233 -19769741 - PB1D10 SINE Alu -12 105 1 4 1223 274 252 54 109 chr15 83725240 83725387 -19769587 + MIRc SINE MIR 30 168 -100 4 1223 235 339 140 25 chr15 83727424 83727519 -19767455 + B4 SINE B4 2 107 -185 4 1223 207 0 0 0 chr15 83727519 83727542 -19767432 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1223 235 339 140 25 chr15 83727542 83727646 -19767328 + B4 SINE B4 108 223 -69 4 1223 244 207 28 44 chr15 83728460 83728642 -19766332 + (CATA)n Simple_repeat Simple_repeat 1 179 0 4 1223 280 250 22 43 chr15 83728664 83728802 -19766172 + (CATA)n Simple_repeat Simple_repeat 3 137 0 4 1223 304 335 106 25 chr15 83728835 83729034 -19765940 + HAL1 LINE L1 1525 1739 -768 4 1223 795 21 0 0 chr15 83729545 83729638 -19765336 + (GAAA)n Simple_repeat Simple_repeat 4 96 0 4 1223 250 100 0 57 chr15 83730011 83730064 -19764910 + GA-rich Low_complexity Low_complexity 2 51 0 4 1223 244 286 13 25 chr15 83730526 83730605 -19764369 - L2b LINE L2 -10 3365 3288 4 1223 428 303 12 72 chr15 83730867 83731034 -19763940 - B3A SINE B2 -5 211 55 4 1223 880 276 31 8 chr15 83731308 83731564 -19763410 + B4 SINE B4 19 280 -12 4 1223 184 0 62 31 chr15 83731568 83731600 -19763374 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 4 1223 2104 164 3 19 chr15 83731600 83731979 -19762995 - MTB_Mm LTR MaLR -31 376 4 4 1223 649 275 52 84 chr15 83733101 83733387 -19761587 - B4 SINE B4 -2 290 14 4 1223 216 97 0 0 chr15 83735448 83735479 -19759495 + (TTC)n Simple_repeat Simple_repeat 2 32 0 4 1223 892 216 112 10 chr15 83736241 83736437 -19758537 + B3 SINE B2 1 216 0 4 1223 399 89 0 0 chr15 83736890 83736946 -19758028 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1223 2284 106 158 3 chr15 83740108 83740449 -19754525 - ORR1B1 LTR MaLR 0 394 1 4 1223 7118 182 108 102 chr15 83740449 83742400 -19752574 - ORR1B1-int LTR MaLR 0 1963 2 4 1223 2497 125 62 3 chr15 83742404 83742772 -19752202 - ORR1B1 LTR MaLR -3 391 2 4 1223 368 274 163 35 chr15 83744243 83744450 -19750524 - B4A SINE B4 -1 291 42 4 1223 207 0 0 0 chr15 83744450 83744473 -19750501 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 4 1223 649 176 126 0 chr15 83744473 83744592 -19750382 - B1_Mur1 SINE Alu -12 137 4 4 1223 229 325 125 39 chr15 83744592 83744625 -19750349 - ID SINE ID -183 41 5 4 1223 268 308 0 13 chr15 83744670 83744749 -19750225 + ID4 SINE ID 3 80 -3 4 1223 414 296 85 16 chr15 83745727 83745916 -19749058 + L1MC LINE L1 3793 3994 -2152 4 1223 1641 102 34 191 chr15 83746314 83746480 -19748494 + ORR1A3 LTR MaLR 1 106 -220 4 1223 4471 16 2 0 chr15 83746480 83746978 -19747996 + L1Md_A LINE L1 6084 6582 0 4 1223 1641 102 34 191 chr15 83746978 83747198 -19747776 + ORR1A3 LTR MaLR 107 326 0 4 1223 558 279 0 0 chr15 83747853 83747982 -19746992 - ID_B1 SINE B4 -16 208 80 4 1223 425 273 0 26 chr15 83747984 83748097 -19746877 - PB1D10 SINE Alu 0 117 8 4 1223 754 217 7 14 chr15 83748133 83748278 -19746696 - RSINE1 SINE B4 -19 146 3 4 1223 413 282 6 74 chr15 83749235 83749391 -19745583 - B3A SINE B2 -53 145 1 4 1223 336 321 18 9 chr15 83750779 83750892 -19744082 + PB1D7 SINE Alu 7 120 0 4 1223 3701 36 18 88 chr15 83750979 83751490 -19743484 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1223 369 172 0 0 chr15 83752060 83752118 -19742856 + B3A SINE B2 63 120 -78 4 1223 338 331 60 8 chr15 83752435 83752569 -19742405 + Looper DNA PiggyBac 772 912 -646 4 1223 228 341 74 22 chr15 83752591 83752726 -19742248 + Looper DNA PiggyBac 1017 1158 -400 4 1223 203 348 78 0 chr15 83753239 83753354 -19741620 + L2b LINE L2 3039 3162 -213 4 1223 621 247 39 7 chr15 83753650 83753805 -19741169 - B3A SINE B2 -16 182 23 4 1223 426 20 0 0 chr15 83754940 83754991 -19739983 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1224 239 286 19 0 chr15 83755385 83755470 -19739504 + MIRc SINE MIR 74 164 -112 4 1224 11740 90 19 16 chr15 83756210 83761129 -19733845 - L1Md_F2 LINE L1 -12 6570 66 4 1224 224 321 72 36 chr15 83761380 83761519 -19733455 + L2a LINE L2 3281 3424 -2 4 1224 203 284 50 50 chr15 83761827 83761927 -19733047 + MIR3 SINE MIR 55 154 -54 4 1224 684 209 0 0 chr15 83764605 83764777 -19730197 + (CA)n Simple_repeat Simple_repeat 2 173 0 4 1224 627 224 0 0 chr15 83764808 83764982 -19729992 + (CA)n Simple_repeat Simple_repeat 1 174 0 4 1224 384 259 0 0 chr15 83764998 83765133 -19729841 + (CA)n Simple_repeat Simple_repeat 1 135 0 4 1224 492 18 0 0 chr15 83765935 83765992 -19728982 + (GA)n Simple_repeat Simple_repeat 1 57 0 4 1224 428 317 125 53 chr15 83768386 83768706 -19726268 + LTR75 LTR ERVL 82 424 -138 4 1224 837 175 0 0 chr15 83768760 83768931 -19726043 + (TG)n Simple_repeat Simple_repeat 1 171 0 4 1224 269 309 25 0 chr15 83769710 83769791 -19725183 + (TATG)n Simple_repeat Simple_repeat 4 86 0 4 1224 278 295 73 94 chr15 83769792 83769882 -19725092 - B3A SINE B2 -11 187 1 4 1224 345 228 178 0 chr15 83769882 83769983 -19724991 - B4 SINE B4 -173 119 1 4 1224 180 0 0 0 chr15 83771217 83771237 -19723737 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 1224 404 238 56 106 chr15 83771264 83771314 -19723660 + L1MC3 LINE L1 7424 7466 -319 4 1224 380 20 20 0 chr15 83771314 83771363 -19723611 + (TAA)n Simple_repeat Simple_repeat 3 52 0 4 1224 404 238 56 106 chr15 83771363 83771472 -19723502 + L1MC3 LINE L1 7467 7575 -210 4 1224 1063 99 0 0 chr15 83771473 83771614 -19723360 + B1_Mus1 SINE Alu 2 142 -6 4 1224 324 321 173 22 chr15 83771669 83771818 -19723156 + L1MEg LINE L1 1430 1597 -4487 4 1224 342 0 0 0 chr15 83771818 83771856 -19723118 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1224 324 321 173 22 chr15 83771856 83771932 -19723042 + L1MEg LINE L1 1598 1688 -4396 4 1224 2504 202 24 32 chr15 83771936 83772472 -19722502 - RMER5 LTR ERV1 -2 532 1 4 1224 1333 240 113 16 chr15 83773663 83774044 -19720930 - MTD LTR MaLR -1 418 1 4 1224 492 328 98 30 chr15 83774222 83774355 -19720619 - B4 SINE B4 -8 284 134 4 1224 246 62 0 0 chr15 83774355 83774387 -19720587 + (CCA)n Simple_repeat Simple_repeat 2 33 0 4 1224 505 259 40 1 chr15 83774387 83774517 -19720457 - B4A SINE B4 -157 135 3 4 1224 920 248 68 84 chr15 83775959 83776274 -19718700 + MTE2b LTR MaLR 7 321 -58 4 1224 695 258 48 6 chr15 83777481 83777688 -19717286 - B3A SINE B2 0 216 2 4 1224 210 336 0 32 chr15 83779005 83779078 -19715896 + (TATG)n Simple_repeat Simple_repeat 1 71 0 4 1224 369 0 0 0 chr15 83779078 83779119 -19715855 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 1224 210 336 0 32 chr15 83779119 83779168 -19715806 + (TATG)n Simple_repeat Simple_repeat 1 48 0 4 1224 486 0 0 0 chr15 83779562 83779616 -19715358 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 1224 434 222 67 0 chr15 83779949 83780039 -19714935 - PB1D7 SINE Alu 0 120 25 4 1224 201 39 0 0 chr15 83780113 83780139 -19714835 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1224 883 194 6 6 chr15 83781232 83781569 -19713405 + (TATG)n Simple_repeat Simple_repeat 1 337 0 4 1224 362 177 0 0 chr15 83781615 83781677 -19713297 - B3A SINE B2 -136 62 1 4 1224 670 258 123 9 chr15 83781749 83781968 -19713006 - B4A SINE B4 -10 282 39 4 1224 422 321 61 5 chr15 83782272 83782501 -19712473 - L1M3 LINE L1 -434 5745 5500 4 1224 1936 194 14 19 chr15 83783223 83783591 -19711383 + ORR1D1 LTR MaLR 1 366 -8 4 1224 279 296 82 44 chr15 83783912 83784071 -19710903 - MER20 DNA MER1_type -54 165 1 4 1224 386 210 151 57 chr15 83784099 83784205 -19710769 + PB1D10 SINE Alu 2 117 0 4 1224 705 239 0 0 chr15 83784459 83784639 -19710335 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 1224 257 237 0 17 chr15 83784641 83784701 -19710273 + (TATG)n Simple_repeat Simple_repeat 4 62 0 4 1224 339 253 25 0 chr15 83785922 83786001 -19708973 + ID4_ SINE ID 3 83 0 4 1224 276 250 71 0 chr15 83786018 83786102 -19708872 + MLT1E2 LTR MaLR 98 187 -440 4 1224 468 272 85 42 chr15 83787070 83787235 -19707739 + MT2A LTR ERVL 296 467 -66 4 1224 236 267 0 157 chr15 83787405 83787494 -19707480 + RSINE1 SINE B4 87 161 -4 4 1224 371 301 128 5 chr15 83787525 83787729 -19707245 + L1M5 LINE L1 5397 5625 -499 4 1224 456 144 611 0 chr15 83789517 83789656 -19705318 + URR1A DNA MER1_type 3 226 0 4 1224 389 302 9 9 chr15 83791054 83791161 -19703813 + RMER10B LTR ERVL 269 375 -23 4 1224 531 264 116 0 chr15 83792372 83792493 -19702481 + RSINE1 SINE B4 23 157 -8 4 1224 762 225 0 0 chr15 83792522 83792700 -19702274 + (CA)n Simple_repeat Simple_repeat 1 178 0 4 1224 261 283 49 29 chr15 83793881 83793983 -19700991 + RMER15 LTR ERVL 414 517 -58 5 1224 424 314 188 28 chr15 83794061 83794255 -19700719 + L1M2 LINE L1 3042 3265 -2878 5 1224 438 20 0 0 chr15 83794255 83794306 -19700668 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1224 424 314 188 28 chr15 83794306 83794468 -19700506 + L1M2 LINE L1 3266 3454 -2689 5 1224 496 281 0 0 chr15 83794479 83794593 -19700381 + PB1D10 SINE Alu 1 114 -3 5 1224 258 264 83 0 chr15 83794854 83794926 -19700048 + MIRm SINE MIR 195 272 -4 5 1224 2755 123 9 12 chr15 83795698 83796127 -19698847 - MERVK26-int LTR ERVK -326 6593 6166 5 1224 406 199 62 11 chr15 83796147 83796249 -19698725 + PB1D7 SINE Alu 3 112 -8 5 1224 483 276 44 56 chr15 83796563 83796781 -19698193 - B4A SINE B4 -63 229 1 5 1224 949 206 158 29 chr15 83797189 83797533 -19697441 + MTD LTR MaLR 10 419 0 5 1224 290 298 10 25 chr15 83799070 83799166 -19695808 + B4A SINE B4 52 138 -86 5 1224 228 35 0 0 chr15 83799264 83799293 -19695681 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1224 270 0 0 0 chr15 83799509 83799539 -19695435 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 5 1224 588 163 0 39 chr15 83799540 83799642 -19695332 - B1_Mur1 SINE Alu -12 137 40 5 1224 682 152 17 11 chr15 83799642 83799821 -19695153 + CT-rich Low_complexity Low_complexity 1 180 0 5 1224 181 98 49 0 chr15 83799825 83799866 -19695108 + (TC)n Simple_repeat Simple_repeat 1 43 0 5 1224 280 259 0 0 chr15 83799876 83799934 -19695040 - B1F2 SINE Alu -91 58 1 5 1224 293 271 101 85 chr15 83802540 83802798 -19692176 + HAL1b LINE L1 1239 1500 -509 5 1224 240 252 20 39 chr15 83803341 83803494 -19691480 + (CA)n Simple_repeat Simple_repeat 2 151 0 5 1224 298 258 41 51 chr15 83804280 83804378 -19690596 + B4 SINE B4 73 169 -123 5 1224 318 221 24 35 chr15 83804304 83804432 -19690542 + PB1D10 SINE Alu 8 125 -22 5 1224 293 218 244 24 chr15 83804556 83804683 -19690291 + B4A SINE B4 1 155 -137 5 1224 398 36 0 18 chr15 83804860 83804917 -19690057 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 1224 700 274 36 10 chr15 83805170 83805362 -19689612 + B3A SINE B2 2 198 0 5 1224 309 176 0 52 chr15 83806080 83806176 -19688798 + (CATA)n Simple_repeat Simple_repeat 4 94 0 5 1224 503 0 32 0 chr15 83806176 83806238 -19688736 + (CACAT)n Simple_repeat Simple_repeat 1 64 0 5 1224 261 0 0 0 chr15 83807069 83807098 -19687876 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1224 186 286 0 0 chr15 83807395 83807437 -19687537 + MIR SINE MIR 108 149 -59 5 1224 466 210 87 24 chr15 83807665 83807792 -19687182 + L1MA9 LINE L1 6114 6248 -64 5 1224 337 250 134 47 chr15 83807853 83808025 -19686949 + MTEa LTR MaLR 173 359 -20 5 1224 348 24 0 0 chr15 83808027 83808068 -19686906 + (GA)n Simple_repeat Simple_repeat 2 42 0 5 1224 336 289 20 10 chr15 83808168 83808266 -19686708 + GA-rich Low_complexity Low_complexity 4 102 0 5 1224 1503 252 29 11 chr15 83808481 83808830 -19686144 + ORR1B1 LTR MaLR 9 363 -16 5 1224 674 323 149 37 chr15 83808812 83809037 -19685937 + ORR1B1-int LTR MaLR 5 238 -1132 5 1224 921 89 0 0 chr15 83809037 83809183 -19685791 + (CAGG)n Simple_repeat Simple_repeat 1 146 0 5 1224 1156 237 192 15 chr15 83809183 83809546 -19685428 + ORR1B1-int LTR MaLR 239 709 -871 5 1224 1751 133 143 15 chr15 83809536 83809872 -19685102 + ORR1B1 LTR MaLR 15 393 -1 5 1224 1701 283 168 13 chr15 83809896 83810526 -19684448 + MTE-int LTR MaLR 711 1438 -142 5 1224 185 128 21 0 chr15 83810542 83810589 -19684385 + (TTTTTG)n Simple_repeat Simple_repeat 1 48 0 5 1224 1257 54 0 0 chr15 83810591 83810738 -19684236 - B1_Mus1 SINE Alu 0 148 2 5 1224 270 326 21 32 chr15 83810832 83810927 -19684047 - RSINE1 SINE B4 -68 97 4 5 1224 496 291 26 32 chr15 83810927 83811095 -19683879 + MTE-int LTR MaLR 1427 1575 -5 5 1224 2101 105 123 42 chr15 83811096 83811453 -19683521 - ORR1B1 LTR MaLR -8 386 1 5 1224 350 269 117 61 chr15 83812163 83812393 -19682581 + HAL1b LINE L1 753 995 -1014 5 1224 756 244 28 28 chr15 83813523 83813704 -19681270 - B3A SINE B2 -17 181 1 5 1224 180 0 0 0 chr15 83813817 83813837 -19681137 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 5 1224 674 309 32 9 chr15 83814172 83814391 -19680583 + B4A SINE B4 1 224 -68 5 1224 189 0 0 0 chr15 83814430 83814451 -19680523 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 5 1224 526 233 8 17 chr15 83814983 83815101 -19679873 - PB1D10 SINE Alu 0 117 1 5 1224 261 0 0 0 chr15 83815119 83815148 -19679826 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1224 524 275 134 138 chr15 83815928 83816219 -19678755 + B4 SINE B4 1 290 -2 5 1224 262 290 43 0 chr15 83816820 83816844 -19678130 + (CATG)n Simple_repeat Simple_repeat 1 26 0 5 1224 438 53 0 0 chr15 83816844 83816901 -19678073 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1224 262 290 43 0 chr15 83816901 83816969 -19678005 + (CATG)n Simple_repeat Simple_repeat 3 72 0 5 1224 956 238 43 80 chr15 83816996 83817297 -19677677 - B4 SINE B4 -2 290 1 5 1224 299 274 126 0 chr15 83818472 83818567 -19676407 - MER44D DNA MER2_type -587 118 12 5 1224 243 0 0 0 chr15 83819660 83819687 -19675287 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1224 32 0 0 0 chr15 83819884 83819916 -19675058 + AT_rich Low_complexity Low_complexity 1 32 0 5 1224 556 291 59 13 chr15 83821181 83821334 -19673640 - B3A SINE B2 -38 160 1 5 1224 955 101 25 18 chr15 83821472 83821756 -19673218 + (CA)n Simple_repeat Simple_repeat 1 286 0 5 1224 266 278 41 14 chr15 83821843 83821916 -19673058 - ID4 SINE ID 0 83 9 5 1224 1431 230 164 9 chr15 83823511 83823858 -19671116 - MTD LTR MaLR -14 405 5 5 1224 227 31 0 30 chr15 83824100 83824133 -19670841 + (GGA)n Simple_repeat Simple_repeat 1 32 0 5 1224 586 309 37 0 chr15 83824312 83824503 -19670471 + MER58B DNA MER1_type 38 235 -106 5 1224 251 267 17 0 chr15 83824697 83824757 -19670217 + B1F SINE Alu 33 93 -56 5 1224 270 0 0 0 chr15 83824764 83824794 -19670180 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 5 1224 435 38 0 0 chr15 83824794 83824847 -19670127 + (GGGA)n Simple_repeat Simple_repeat 3 55 0 5 1224 1061 118 6 0 chr15 83824849 83825027 -19669947 + (GGAGA)n Simple_repeat Simple_repeat 2 180 0 5 1224 216 200 0 0 chr15 83825031 83825076 -19669898 + A-rich Low_complexity Low_complexity 1 45 0 5 1224 275 270 0 0 chr15 83825103 83825166 -19669808 + ID_B1 SINE B4 92 154 -70 5 1224 214 288 108 36 chr15 83825166 83825186 -19669788 + PB1D10 SINE Alu 11 99 -18 5 1224 1018 271 144 15 chr15 83825668 83826002 -19668972 - MTE2b LTR MaLR 0 379 3 5 1224 397 310 17 22 chr15 83826134 83826312 -19668662 + (TGGA)n Simple_repeat Simple_repeat 1 177 0 5 1224 337 322 35 0 chr15 83826336 83826510 -19668464 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 5 1224 359 85 0 33 chr15 83826523 83826584 -19668390 + (TATG)n Simple_repeat Simple_repeat 2 60 0 5 1224 448 287 29 6 chr15 83826623 83826638 -19668336 + (TGGA)n Simple_repeat Simple_repeat 1 15 0 5 1224 216 67 0 0 chr15 83826638 83826668 -19668306 + (GCTG)n Simple_repeat Simple_repeat 1 30 0 5 1224 448 287 29 6 chr15 83826668 83826827 -19668147 + (TGGA)n Simple_repeat Simple_repeat 4 167 0 5 1224 234 217 158 6 chr15 83827602 83827760 -19667214 - RMER17C LTR ERVK -147 263 82 5 1224 419 235 61 10 chr15 83827746 83827845 -19667129 - B4 SINE B4 -15 277 174 5 1224 213 320 206 32 chr15 83827794 83827920 -19667054 - B1F2 SINE Alu -1 148 1 5 1224 240 35 0 0 chr15 83828149 83828178 -19666796 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1224 243 265 25 17 chr15 83828873 83828992 -19665982 + CT-rich Low_complexity Low_complexity 3 122 0 5 1224 299 254 0 0 chr15 83828932 83828995 -19665979 + C-rich Low_complexity Low_complexity 1 63 0 5 1224 198 71 0 0 chr15 83829396 83829424 -19665550 + (TTG)n Simple_repeat Simple_repeat 1 28 0 5 1224 593 252 29 7 chr15 83829436 83829572 -19665402 - B1_Mur1 SINE Alu -10 139 1 5 1224 2782 184 20 19 chr15 83831001 83831542 -19663432 + Lx9 LINE L1 6975 7516 -128 5 1224 216 237 0 0 chr15 83831542 83831580 -19663394 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1224 437 171 139 42 chr15 83831580 83831745 -19663229 + Lx9 LINE L1 7457 7637 -7 5 1224 1023 189 102 0 chr15 83832493 83832689 -19662285 + B3 SINE B2 1 216 0 5 1224 273 132 0 0 chr15 83832741 83832779 -19662195 + ORR1C2 LTR MaLR 2 39 -345 5 1224 2357 141 148 81 chr15 83832788 83833321 -19661653 + RMER4B LTR ERVK 17 585 0 5 1224 1293 167 199 14 chr15 83833321 83833607 -19661367 + ORR1C2 LTR MaLR 35 373 -11 5 1224 2367 95 3 58 chr15 83833607 83833953 -19661021 + ORR1A2 LTR MaLR 1 327 0 5 1224 396 0 0 0 chr15 83835235 83835279 -19659695 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1224 1210 225 36 21 chr15 83835310 83835591 -19659383 - B4 SINE B4 -6 286 2 5 1224 213 270 287 42 chr15 83836679 83836822 -19658152 + MIR SINE MIR 65 242 -20 5 1224 1152 262 37 65 chr15 83837122 83837473 -19657501 - MTE2a LTR MaLR 0 379 39 5 1224 1009 48 0 0 chr15 83837483 83837607 -19657367 - B1_Mus1 SINE Alu -24 124 1 5 1224 233 237 26 26 chr15 83837768 83837846 -19657128 + CT-rich Low_complexity Low_complexity 4 81 0 5 1224 23 0 0 0 chr15 83840502 83840525 -19654449 + AT_rich Low_complexity Low_complexity 1 23 0 5 1224 188 36 0 35 chr15 83840618 83840647 -19654327 + MIRc SINE MIR 114 141 -127 5 1224 189 339 155 10 chr15 83841266 83841460 -19653514 - L2 LINE L2 -351 3068 2847 5 1224 254 209 60 0 chr15 83843173 83843240 -19651734 + ID4 SINE ID 4 74 -9 5 1224 1591 53 0 0 chr15 83843574 83843763 -19651211 - B2_Mm1a SINE B2 -4 189 1 5 1224 239 356 121 0 chr15 83844122 83844254 -19650720 - Tigger5 DNA MER2_type -2162 244 97 5 1224 228 261 15 30 chr15 83844560 83844627 -19650347 - MLT1A1 LTR MaLR -273 135 70 5 1224 2414 145 50 43 chr15 83844711 83845129 -19649845 - MTC LTR MaLR 0 421 1 6 1224 378 175 402 0 chr15 83845348 83845445 -19649529 - RSINE1 SINE B4 -24 141 6 6 1224 380 245 32 0 chr15 83845685 83845779 -19649195 + MLT1A0 LTR MaLR 248 344 -21 6 1224 325 310 55 7 chr15 83845846 83845993 -19648981 - L1MEd LINE L1 -5086 1139 949 6 1224 310 250 26 80 chr15 83846579 83846692 -19648282 - L1M2 LINE L1 -2957 3186 3080 6 1224 373 255 0 39 chr15 83847345 83847447 -19647527 + BC1_Mm scRNA scRNA 2 99 -53 6 1224 955 198 41 50 chr15 83847698 83847871 -19647103 - B3 SINE B2 0 216 43 6 1224 2589 128 13 0 chr15 83847871 83848260 -19646714 + ORR1B1 LTR MaLR 1 394 0 6 1224 955 198 41 50 chr15 83848260 83848304 -19646670 - B3 SINE B2 -174 42 1 6 1224 521 246 18 0 chr15 83848821 83848935 -19646039 + PB1D10 SINE Alu 1 116 -1 6 1224 642 223 35 35 chr15 83849567 83849711 -19645263 - RSINE1 SINE B4 -19 146 3 6 1224 340 269 137 36 chr15 83849718 83849857 -19645117 + L1MC4 LINE L1 7690 7842 -200 6 1224 721 319 137 8 chr15 83849937 83850777 -19644197 + L1MA4A LINE L1 4481 5439 -740 6 1224 367 225 0 36 chr15 83850786 83850869 -19644105 + B4A SINE B4 7 86 -206 6 1224 274 245 13 92 chr15 83850869 83850939 -19644035 + BC1_Mm scRNA scRNA 7 147 -5 6 1224 563 320 30 15 chr15 83850934 83851134 -19643840 + B4A SINE B4 82 284 -8 6 1224 359 339 22 6 chr15 83851287 83851465 -19643509 + L1MA4A LINE L1 5547 5727 -564 6 1224 337 264 18 54 chr15 83851501 83851613 -19643361 + L1MA4A LINE L1 5818 5925 -378 6 1224 213 319 0 21 chr15 83851714 83851807 -19643167 + GA-rich Low_complexity Low_complexity 1 91 0 6 1224 328 371 6 32 chr15 83851815 83851971 -19643003 + HAL1-3A_ME LINE L1 2284 2435 -423 6 1224 763 208 44 39 chr15 83852174 83852354 -19642620 + B3 SINE B2 36 216 0 6 1224 384 190 0 0 chr15 83852408 83852487 -19642487 + (CA)n Simple_repeat Simple_repeat 1 79 0 6 1224 927 260 65 72 chr15 83853123 83853413 -19641561 + B4 SINE B4 1 288 -4 6 1224 494 129 12 0 chr15 83853413 83853498 -19641476 + (GA)n Simple_repeat Simple_repeat 1 86 0 6 1224 795 266 49 26 chr15 83854066 83854332 -19640642 + B4A SINE B4 3 274 -18 6 1224 431 104 208 0 chr15 83854901 83854978 -19639996 + PB1D9 SINE Alu 28 120 0 6 1224 201 197 0 0 chr15 83854978 83855044 -19639930 + A-rich Low_complexity Low_complexity 1 66 0 6 1224 982 111 14 14 chr15 83855058 83855204 -19639770 - B1_Mur3 SINE Alu -1 148 3 6 1224 2117 89 47 74 chr15 83855562 83855900 -19639074 - ORR1A4 LTR MaLR 0 329 1 6 1224 429 230 94 22 chr15 83855935 83856073 -19638901 + B1_Mur1 SINE Alu 2 149 0 6 1224 226 235 0 0 chr15 83856073 83856124 -19638850 + GA-rich Low_complexity Low_complexity 2 52 0 6 1224 263 203 87 0 chr15 83856986 83857055 -19637919 + L1MC4 LINE L1 7238 7312 -730 6 1224 444 281 86 61 chr15 83857759 83857956 -19637018 + Lx8 LINE L1 6755 6956 -517 6 1224 252 278 7 15 chr15 83857956 83858091 -19636883 + (CATA)n Simple_repeat Simple_repeat 1 134 0 6 1224 929 289 127 15 chr15 83858127 83858584 -19636390 + Lx8 LINE L1 6964 7471 -2 6 1224 235 209 39 147 chr15 83858477 83858606 -19636368 + RMER1C Other Other 1227 1341 -1 6 1224 313 294 162 29 chr15 83858611 83858821 -19636153 + L1MEa LINE L1 281 518 -5576 6 1224 353 295 22 0 chr15 83858867 83858971 -19636003 + MER3 DNA MER1_type 77 183 -26 6 1224 293 276 194 0 chr15 83858965 83859135 -19635839 + Charlie5 DNA MER1_type 2240 2442 -182 6 1224 763 227 60 0 chr15 83859190 83859340 -19635634 + RSINE1 SINE B4 3 161 -4 6 1224 231 146 0 0 chr15 83859375 83859416 -19635558 + (TTA)n Simple_repeat Simple_repeat 3 43 0 6 1224 1244 49 0 0 chr15 83859421 83859564 -19635410 - B1_Mus1 SINE Alu -5 143 1 6 1224 264 310 37 25 chr15 83859660 83859822 -19635152 + L1MEa LINE L1 648 811 -5389 6 1224 1421 68 17 0 chr15 83859892 83860068 -19634906 + B2_Mm2 SINE B2 4 182 -13 6 1224 207 0 0 0 chr15 83860068 83860091 -19634883 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1224 481 264 33 0 chr15 83860390 83860511 -19634463 - B1F1 SINE Alu -24 125 1 6 1224 1424 33 9 13 chr15 83861171 83861630 -19633344 + (GAA)n Simple_repeat Simple_repeat 1 456 0 6 1224 417 86 0 0 chr15 83861651 83861709 -19633265 + (GGAA)n Simple_repeat Simple_repeat 2 59 0 6 1224 243 146 0 0 chr15 83862351 83862392 -19632582 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 1224 342 264 127 63 chr15 83862423 83862581 -19632393 - B4A SINE B4 -123 169 2 6 1224 762 259 21 14 chr15 83862710 83862907 -19632067 + B3A SINE B2 15 214 -2 6 1224 934 161 0 0 chr15 83862911 83863060 -19631914 + B1_Mur2 SINE Alu 1 149 0 6 1224 480 271 17 81 chr15 83863842 83864015 -19630959 - RSINE1 SINE B4 0 165 4 6 1224 198 167 0 0 chr15 83864028 83864064 -19630910 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1224 759 257 209 8 chr15 83864072 83864311 -19630663 - B4A SINE B4 -4 288 2 6 1224 232 167 0 0 chr15 83864361 83864409 -19630565 + T-rich Low_complexity Low_complexity 1 48 0 6 1224 368 306 47 40 chr15 83865223 83865373 -19629601 + MTEb LTR MaLR 211 361 -18 6 1224 371 163 13 52 chr15 83865574 83865729 -19629245 + GA-rich Low_complexity Low_complexity 2 150 0 6 1224 40 0 0 0 chr15 83865843 83865883 -19629091 + AT_rich Low_complexity Low_complexity 1 40 0 6 1224 1131 29 0 7 chr15 83865888 83866027 -19628947 + B1_Mm SINE Alu 10 147 0 6 1224 203 32 65 0 chr15 83866027 83866058 -19628916 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 6 1224 4344 23 12 0 chr15 83866314 83866801 -19628173 + MT2_Mm LTR ERVL 1 493 0 6 1224 794 233 104 124 chr15 83866867 83867166 -19627808 - MTE2a LTR MaLR -83 296 4 6 1224 265 250 0 0 chr15 83871320 83871380 -19623594 + (TG)n Simple_repeat Simple_repeat 1 60 0 6 1224 568 237 47 116 chr15 83871411 83871626 -19623348 - B4 SINE B4 -86 206 7 6 1224 33 85 0 0 chr15 83871643 83871725 -19623249 + AT_rich Low_complexity Low_complexity 1 82 0 6 1224 894 236 39 39 chr15 83871730 83871937 -19623037 - B3 SINE B2 -8 208 2 6 1224 413 307 81 98 chr15 83872218 83872514 -19622460 + B4A SINE B4 1 291 -1 6 1224 1345 81 11 0 chr15 83872546 83872720 -19622254 + B2_Mm1t SINE B2 4 179 -14 6 1224 493 75 333 19 chr15 83872805 83872913 -19622061 + B2_Mm2 SINE B2 47 188 -7 6 1224 299 225 65 43 chr15 83873703 83873796 -19621178 + L1MC LINE L1 5648 5742 -602 6 1224 802 276 34 20 chr15 83873924 83874193 -19620781 + ID_B1 SINE B4 2 284 -8 6 1224 225 183 16 32 chr15 83874251 83874313 -19620661 + L1MD3 LINE L1 7903 7963 -32 6 1224 305 183 55 27 chr15 83875071 83875144 -19619830 - L1_Mur3 LINE L1 -4006 1874 1800 6 1224 1028 236 92 63 chr15 83875138 83875473 -19619501 + Lx8 LINE L1 7126 7470 -3 6 1224 256 239 15 63 chr15 83875561 83875669 -19619305 + PB1D10 SINE Alu 2 105 -22 6 1224 629 254 15 7 chr15 83875809 83875944 -19619030 + RSINE1 SINE B4 1 136 -29 6 1224 280 277 109 24 chr15 83875980 83876082 -19618892 + L1M4 LINE L1 2484 2597 -3549 6 1224 1015 197 30 10 chr15 83876082 83876282 -19618692 + B3 SINE B2 2 205 -11 6 1224 280 277 109 24 chr15 83876282 83876427 -19618547 + L1M4 LINE L1 2598 2752 -3394 6 1224 369 0 0 0 chr15 83876642 83876683 -19618291 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1224 452 268 27 74 chr15 83876683 83876832 -19618142 - RSINE1 SINE B4 -20 145 4 6 1224 575 265 209 13 chr15 83876857 83877335 -19617639 + L1M4 LINE L1 3042 3613 -2533 6 1224 239 71 24 0 chr15 83877796 83877838 -19617136 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 6 1224 1148 89 0 0 chr15 83877875 83878021 -19616953 + B1_Mus2 SINE Alu 2 147 0 6 1224 635 280 58 18 chr15 83878096 83878267 -19616707 + B3A SINE B2 5 182 -16 6 1224 361 218 16 0 chr15 83878267 83878391 -19616583 + (CA)n Simple_repeat Simple_repeat 1 126 0 6 1224 306 93 0 23 chr15 83878395 83878439 -19616535 + HAL1-3A_ME LINE L1 1979 2021 -837 6 1224 1134 82 0 7 chr15 83878478 83878626 -19616348 - B1_Mus1 SINE Alu 0 148 2 6 1224 412 253 11 0 chr15 83879000 83879087 -19615887 + ID_B1 SINE B4 6 93 -131 6 1224 1436 196 122 35 chr15 83879090 83879272 -19615702 - MTD LTR MaLR 0 419 211 6 1224 1311 96 27 0 chr15 83879272 83879459 -19615515 - B2_Mm1t SINE B2 0 193 2 6 1224 1436 196 122 35 chr15 83879459 83879646 -19615328 - MTD LTR MaLR -209 210 18 6 1224 331 256 61 0 chr15 83879657 83879739 -19615235 + ID_B1 SINE B4 94 180 -44 6 1224 706 264 93 14 chr15 83880489 83880704 -19614270 + B4A SINE B4 2 233 -59 6 1224 285 288 12 12 chr15 83881111 83881192 -19613782 + ID4 SINE ID 1 81 -2 6 1224 1147 201 15 0 chr15 83881266 83881470 -19613504 + B3 SINE B2 1 207 -9 6 1224 366 251 22 36 chr15 83881549 83881643 -19613331 + B4 SINE B4 4 96 -196 6 1224 1083 190 44 0 chr15 83881643 83881848 -19613126 + B3 SINE B2 3 216 0 6 1224 305 273 26 126 chr15 83881848 83881904 -19613070 + B4A SINE B4 97 139 -153 6 1224 369 0 0 0 chr15 83882057 83882098 -19612876 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1224 24 0 0 0 chr15 83882478 83882502 -19612472 + AT_rich Low_complexity Low_complexity 1 24 0 6 1224 265 157 58 22 chr15 83883215 83883352 -19611622 + (CA)n Simple_repeat Simple_repeat 2 143 0 6 1224 645 123 47 6 chr15 83883374 83883545 -19611429 + (CA)n Simple_repeat Simple_repeat 1 178 0 6 1224 195 150 50 0 chr15 83883581 83883641 -19611333 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 1224 275 211 40 62 chr15 83883670 83883847 -19611127 + (CA)n Simple_repeat Simple_repeat 1 173 0 6 1224 229 203 214 14 chr15 83884204 83884274 -19610700 + B1_Mur3 SINE Alu 1 84 -65 6 1224 413 189 11 0 chr15 83885107 83885202 -19609772 + (CA)n Simple_repeat Simple_repeat 2 97 0 6 1224 289 308 34 112 chr15 83885503 83885708 -19609266 - MER5A DNA MER1_type 0 189 1 6 1224 482 207 0 0 chr15 83885865 83885947 -19609027 + B3A SINE B2 1 82 -116 6 1224 180 0 0 0 chr15 83885948 83885968 -19609006 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 6 1224 395 259 74 40 chr15 83885968 83886033 -19608941 + B4 SINE B4 87 153 -139 6 1225 1865 224 27 171 chr15 83886373 83886971 -19608003 + RLTR18B LTR ERVK 1 512 0 6 1225 202 100 0 57 chr15 83887234 83887287 -19607687 + T-rich Low_complexity Low_complexity 4 53 0 6 1225 456 289 98 85 chr15 83887294 83887324 -19607650 - MTD LTR MaLR 0 379 352 7 1225 1161 83 0 7 chr15 83887324 83887470 -19607504 - B1_Mus2 SINE Alu -2 145 1 7 1225 1178 252 88 66 chr15 83887470 83887851 -19607123 - MTD LTR MaLR -44 375 1 7 1225 770 214 7 0 chr15 83887898 83888038 -19606936 + B1_Mur1 SINE Alu 1 141 -8 7 1225 671 246 93 44 chr15 83888049 83888221 -19606753 + B3 SINE B2 1 181 -35 7 1225 614 32 43 0 chr15 83888221 83888314 -19606660 + (CATA)n Simple_repeat Simple_repeat 2 98 0 7 1225 681 246 93 44 chr15 83888314 83888345 -19606629 + B3 SINE B2 182 213 -3 7 1225 335 156 31 0 chr15 83888992 83889056 -19605918 - ID_B1 SINE B4 0 224 159 7 1225 235 269 50 25 chr15 83888996 83889076 -19605898 - PB1 SINE Alu -2 125 44 7 1225 213 180 0 76 chr15 83889302 83889368 -19605606 - B1F SINE Alu -88 61 1 7 1225 269 262 80 53 chr15 83889845 83889958 -19605016 + MIRm SINE MIR 39 154 -122 7 1225 398 291 119 0 chr15 83890091 83890225 -19604749 + RSINE1 SINE B4 1 150 -15 7 1225 2675 94 82 73 chr15 83890438 83890864 -19604110 + RLTR23 LTR ERV1 1 430 0 7 1225 367 257 0 0 chr15 83891301 83891375 -19603599 - ID4 SINE ID -2 81 8 7 1225 2539 87 12 0 chr15 83891514 83891837 -19603137 + ORR1A2 LTR MaLR 1 327 0 7 1225 1043 229 123 51 chr15 83891844 83892194 -19602780 - MTD LTR MaLR -44 375 1 7 1225 628 288 0 0 chr15 83892448 83892580 -19602394 + RSINE1 SINE B4 3 134 -31 7 1225 414 0 0 0 chr15 83892592 83892638 -19602336 + (TC)n Simple_repeat Simple_repeat 1 46 0 7 1225 288 53 0 0 chr15 83892638 83892675 -19602299 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1225 195 42 0 0 chr15 83892679 83892703 -19602271 + (CCA)n Simple_repeat Simple_repeat 1 24 0 7 1225 1096 90 21 0 chr15 83893130 83893274 -19601700 - B1_Mus2 SINE Alu 0 147 1 7 1225 902 94 7 7 chr15 83893455 83893595 -19601379 - URR1B DNA MER1_type 0 225 86 7 1225 2072 151 61 25 chr15 83893594 83893761 -19601213 - MTC LTR MaLR -8 413 242 7 1225 2833 49 6 6 chr15 83893761 83894107 -19600867 + ORR1A1 LTR MaLR 1 346 0 7 1225 2072 151 61 25 chr15 83894107 83894332 -19600642 - MTC LTR MaLR -180 241 7 7 1225 479 228 79 0 chr15 83894638 83894739 -19600235 - PB1D10 SINE Alu -8 109 1 7 1225 529 160 56 9 chr15 83895132 83895239 -19599735 + B1_Mur1 SINE Alu 38 149 0 7 1225 31 26 0 0 chr15 83895587 83895625 -19599349 + GC_rich Low_complexity Low_complexity 1 38 0 7 1225 455 266 172 0 chr15 83896048 83896240 -19598734 - L1MCa LINE L1 -4477 2031 1807 7 1225 951 168 102 5 chr15 83896250 83896436 -19598538 - B3 SINE B2 -11 205 2 7 1225 2483 60 91 16 chr15 83896773 83897145 -19597829 - MTB_Mm LTR MaLR -7 400 1 7 1225 243 181 293 14 chr15 83897786 83897926 -19597048 + Charlie1a DNA MER1_type 1075 1253 -202 7 1225 352 258 52 116 chr15 83898618 83899025 -19595949 + RMER17C LTR ERVK 15 395 -15 7 1225 917 236 39 5 chr15 83899672 83899876 -19595098 + B3 SINE B2 6 216 0 7 1225 671 231 86 20 chr15 83901312 83901487 -19593487 - B3A SINE B2 -18 177 1 7 1225 886 90 221 7 chr15 83901537 83901682 -19593292 - B2_Mm2 SINE B2 -18 177 2 7 1225 1589 149 29 84 chr15 83902088 83902560 -19592414 - RMER17C LTR ERVK -484 474 16 7 1225 330 26 0 0 chr15 83902675 83902714 -19592260 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 7 1225 766 164 310 0 chr15 83903346 83903517 -19591457 + URR1B DNA MER1_type 2 225 0 7 1225 236 242 65 0 chr15 83904650 83904712 -19590262 - PB1D10 SINE Alu -34 83 18 7 1225 225 83 0 0 chr15 83904712 83904748 -19590226 + (G)n Simple_repeat Simple_repeat 1 36 0 7 1225 542 312 68 0 chr15 83905611 83905787 -19589187 - B4A SINE B4 0 292 105 7 1225 243 296 80 20 chr15 83905706 83905806 -19589168 - B1F2 SINE Alu -43 106 1 7 1225 180 152 0 0 chr15 83908436 83908469 -19586505 + (TA)n Simple_repeat Simple_repeat 1 33 0 7 1225 189 0 0 0 chr15 83908692 83908713 -19586261 + (TGGG)n Simple_repeat Simple_repeat 1 21 0 7 1225 261 0 0 0 chr15 83908726 83908755 -19586219 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 1225 324 0 0 0 chr15 83908755 83908790 -19586184 + (GA)n Simple_repeat Simple_repeat 1 36 0 7 1225 407 258 146 84 chr15 83912498 83912773 -19582201 + B4 SINE B4 1 292 0 7 1225 225 159 0 0 chr15 83912792 83912836 -19582138 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1225 1306 162 9 9 chr15 83912979 83913191 -19581783 + B3 SINE B2 1 212 -4 7 1225 348 235 17 136 chr15 83913207 83913325 -19581649 + MT2B LTR ERVL 155 258 -343 7 1225 707 172 29 36 chr15 83913233 83913372 -19581602 + B1_Mus2 SINE Alu 8 145 -2 7 1225 648 290 15 63 chr15 83913566 83913772 -19581202 + B3A SINE B2 3 198 0 7 1225 333 301 68 104 chr15 83913800 83913963 -19581011 + ORR1D2 LTR MaLR 30 186 -184 7 1225 294 29 0 0 chr15 83914909 83914944 -19580030 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 1225 288 337 66 0 chr15 83914945 83915111 -19579863 - L2a LINE L2 -268 3158 2982 7 1225 201 346 89 41 chr15 83915203 83915474 -19579500 - L2a LINE L2 -632 2787 2504 7 1225 892 219 82 0 chr15 83915737 83915933 -19579041 + B3 SINE B2 1 212 -4 7 1225 865 179 14 0 chr15 83916231 83916371 -19578603 + B1_Mur4 SINE Alu 3 144 -6 7 1225 533 155 0 9 chr15 83916372 83916483 -19578491 + GA-rich Low_complexity Low_complexity 4 113 0 7 1225 191 279 132 0 chr15 83917997 83918065 -19576909 - MIR3 SINE MIR -47 161 85 7 1225 503 242 60 8 chr15 83918863 83918996 -19575978 - B1F SINE Alu -8 141 2 7 1225 225 0 0 0 chr15 83921162 83921187 -19573787 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 1225 400 303 9 9 chr15 83922057 83922167 -19572807 - B1F SINE Alu -39 110 1 7 1225 1379 105 0 5 chr15 83922174 83922365 -19572609 - B2_Mm2 SINE B2 -4 191 2 7 1225 580 38 33 131 chr15 83924699 83924821 -19570153 + L1Md_F2 LINE L1 6472 6581 -1 7 1225 391 202 29 87 chr15 83924881 83924984 -19569990 + PB1D10 SINE Alu 16 112 -5 7 1225 1267 48 0 0 chr15 83925011 83925158 -19569816 + B1_Mus2 SINE Alu 1 147 0 7 1225 396 0 0 0 chr15 83925190 83925234 -19569740 + (TC)n Simple_repeat Simple_repeat 2 45 0 7 1225 369 0 0 0 chr15 83925234 83925274 -19569700 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1225 225 65 0 0 chr15 83925277 83925308 -19569666 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 7 1225 261 0 0 0 chr15 83925672 83925701 -19569273 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 1225 249 333 135 8 chr15 83925999 83926132 -19568842 + Lx8 LINE L1 7284 7433 -40 7 1225 3283 33 18 5 chr15 83927357 83927750 -19567224 - MTB LTR MaLR 0 400 3 7 1225 1520 89 192 29 chr15 83927752 83928065 -19566909 - MTB-int LTR MaLR 0 1098 735 7 1225 2438 89 82 23 chr15 83928065 83928492 -19566482 + RLTR44E LTR ERVK 1 452 0 7 1225 4648 120 34 16 chr15 83928492 83929304 -19565670 - MTB-int LTR MaLR -429 829 3 7 1225 3218 68 10 8 chr15 83929304 83929703 -19565271 - MTB LTR MaLR 0 400 1 7 1225 383 271 149 8 chr15 83929847 83929981 -19564993 - Tigger7 DNA MER2_type -11 2480 2328 7 1225 843 127 0 0 chr15 83929992 83930118 -19564856 + B1_Mus2 SINE Alu 6 131 -16 7 1225 714 24 0 0 chr15 83930120 83930204 -19564770 + (GAAA)n Simple_repeat Simple_repeat 1 84 0 7 1225 241 186 25 136 chr15 83930205 83930236 -19564738 - Tigger7 DNA MER2_type -187 2304 2275 7 1225 1739 21 0 0 chr15 83930236 83930428 -19564546 + B2_Mm1a SINE B2 2 193 0 7 1225 241 186 25 136 chr15 83930428 83930477 -19564497 - Tigger7 DNA MER2_type -217 2274 2233 7 1225 303 93 0 0 chr15 83930486 83930529 -19564445 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 1225 202 292 0 0 chr15 83930569 83930617 -19564357 + GA-rich Low_complexity Low_complexity 2 49 0 7 1225 1039 138 186 21 chr15 83931453 83931646 -19563328 - URR1A DNA MER1_type 0 226 2 7 1225 1147 253 105 45 chr15 83932182 83932563 -19562411 + MTD LTR MaLR 2 405 -14 7 1225 201 304 89 0 chr15 83932567 83932646 -19562328 + MIR SINE MIR 53 138 -138 7 1225 631 274 0 75 chr15 83934170 83934371 -19560603 + ID_B1 SINE B4 37 222 -2 7 1225 466 235 20 0 chr15 83934392 83934490 -19560484 + PB1D10 SINE Alu 9 108 -9 7 1225 335 121 17 0 chr15 83934497 83934555 -19560419 + (CACG)n Simple_repeat Simple_repeat 4 62 0 7 1225 240 236 111 0 chr15 83935533 83935605 -19559369 + MIR SINE MIR 43 122 -86 7 1225 259 241 0 6 chr15 83935776 83935866 -19559108 - MIR SINE MIR -145 131 43 7 1225 22 0 0 0 chr15 83936029 83936051 -19558923 + GC_rich Low_complexity Low_complexity 1 22 0 7 1225 619 246 20 91 chr15 83936905 83937102 -19557872 + ID_B1 SINE B4 25 207 -17 7 1225 613 257 59 7 chr15 83937376 83937529 -19557445 + RSINE1 SINE B4 2 162 -3 7 1225 337 284 25 0 chr15 83937552 83937633 -19557341 - L1MEg LINE L1 -4140 1944 1862 7 1225 885 206 112 10 chr15 83937812 83938008 -19556966 - B3 SINE B2 0 216 1 7 1225 2025 177 22 46 chr15 83938018 83938221 -19556753 - MTD LTR MaLR -14 405 206 7 1225 202 29 0 54 chr15 83938230 83938267 -19556707 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1225 1084 69 14 7 chr15 83938267 83938403 -19556571 - B1_Mus1 SINE Alu -9 139 2 7 1225 2025 177 22 46 chr15 83938403 83938614 -19556360 - MTD LTR MaLR -214 205 1 7 1225 225 219 120 27 chr15 83938739 83938814 -19556160 - PB1D10 SINE Alu -17 100 19 7 1225 394 359 53 32 chr15 83939124 83939409 -19555565 + L1M4 LINE L1 4233 4523 -1623 7 1225 429 209 76 0 chr15 83939699 83939804 -19555170 + RSINE1 SINE B4 53 165 0 7 1225 329 115 51 0 chr15 83939806 83939884 -19555090 + (CA)n Simple_repeat Simple_repeat 1 82 0 7 1225 205 208 0 19 chr15 83939905 83939959 -19555015 + (CATA)n Simple_repeat Simple_repeat 4 56 0 7 1225 22 0 0 0 chr15 83939998 83940020 -19554954 + AT_rich Low_complexity Low_complexity 1 22 0 7 1225 214 262 0 0 chr15 83940173 83940215 -19554759 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1225 1534 57 0 25 chr15 83940283 83940480 -19554494 + B2_Mm2 SINE B2 1 192 -3 8 1225 522 246 31 8 chr15 83940551 83940678 -19554296 + ID_B1 SINE B4 87 216 -8 8 1225 839 307 50 21 chr15 83940788 83941071 -19553903 + B4A SINE B4 2 292 0 8 1225 623 141 52 13 chr15 83941090 83941401 -19553573 + (CA)n Simple_repeat Simple_repeat 1 323 0 8 1225 347 270 65 74 chr15 83941412 83941520 -19553454 + ID_B1 SINE B4 9 115 -109 8 1225 306 286 28 19 chr15 83941983 83942090 -19552884 - PB1D10 SINE Alu -5 112 5 8 1225 642 233 118 59 chr15 83942137 83942324 -19552650 + B3A SINE B2 1 198 0 8 1225 237 168 56 0 chr15 83942663 83942770 -19552204 + (TGAA)n Simple_repeat Simple_repeat 3 115 0 8 1225 182 179 0 25 chr15 83944662 83944702 -19550272 + MIR SINE MIR 108 146 -62 8 1225 296 258 137 84 chr15 83945051 83945182 -19549792 + B1F SINE Alu 9 146 -3 8 1225 433 404 62 31 chr15 83945200 83945555 -19549419 + L2b LINE L2 2923 3288 -87 8 1225 226 237 63 95 chr15 83946390 83946516 -19548458 - MIRc SINE MIR -127 141 20 8 1225 887 208 124 21 chr15 83947092 83947322 -19547652 + ORR1D1 LTR MaLR 5 231 -163 8 1225 365 0 0 22 chr15 83947322 83947368 -19547606 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 8 1225 845 98 25 0 chr15 83947368 83947490 -19547484 - B1_Mus1 SINE Alu -13 135 11 8 1225 555 289 55 128 chr15 83947490 83947558 -19547416 + ORR1D1 LTR MaLR 232 394 0 8 1225 211 286 105 0 chr15 83947655 83947760 -19547214 + L2c LINE L2 3023 3138 -249 8 1225 210 258 46 46 chr15 83947874 83947939 -19547035 + MIR3 SINE MIR 98 162 -46 8 1225 252 242 269 21 chr15 83948380 83948551 -19546423 + MIRb SINE MIR 33 254 -8 8 1225 487 269 14 63 chr15 83949475 83949618 -19545356 - RSINE1 SINE B4 -21 144 9 8 1225 271 290 24 53 chr15 83949696 83949801 -19545173 + MIRb SINE MIR 42 152 -116 8 1225 603 203 133 0 chr15 83949817 83949945 -19545029 + B1_Mur1 SINE Alu 5 149 0 8 1225 632 301 23 64 chr15 83949958 83950178 -19544796 + B3A SINE B2 6 216 0 8 1225 1214 114 6 0 chr15 83950197 83950345 -19544629 + B2_Mm2 SINE B2 1 148 -47 8 1225 417 20 0 0 chr15 83950345 83950395 -19544579 + (TA)n Simple_repeat Simple_repeat 1 50 0 8 1225 1214 114 6 0 chr15 83950395 83950421 -19544553 + B2_Mm2 SINE B2 149 175 -20 8 1225 345 24 0 0 chr15 83952678 83952720 -19542254 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 1225 199 0 0 61 chr15 83953163 83953196 -19541778 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 8 1225 363 287 65 26 chr15 83954321 83954475 -19540499 + RSINE1 SINE B4 6 165 0 8 1225 1182 75 7 0 chr15 83954818 83954964 -19540010 + B1_Mus1 SINE Alu 2 148 0 8 1225 192 158 0 0 chr15 83955272 83955310 -19539664 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 1225 468 320 13 39 chr15 83955326 83955479 -19539495 - RSINE1 SINE B4 0 165 17 8 1225 414 257 28 0 chr15 83955943 83956052 -19538922 + B1F SINE Alu 36 147 -2 8 1225 468 250 26 8 chr15 83956530 83956647 -19538327 + PB1D7 SINE Alu 2 120 0 8 1225 219 139 0 0 chr15 83957727 83957763 -19537211 + (CCTA)n Simple_repeat Simple_repeat 4 39 0 8 1225 212 77 18 55 chr15 83957997 83958052 -19536922 + (TTTG)n Simple_repeat Simple_repeat 4 56 0 8 1225 639 208 40 0 chr15 83958052 83958177 -19536797 - B1F1 SINE Alu -19 130 1 8 1225 192 294 105 53 chr15 83958446 83958579 -19536395 + MIR SINE MIR 109 248 -14 8 1225 1500 53 16 26 chr15 83959598 83959791 -19535183 - B2_Mm2 SINE B2 -4 191 1 8 1225 234 282 62 37 chr15 83959816 83959897 -19535077 + PB1D7 SINE Alu 6 88 -32 8 1225 545 306 151 28 chr15 83960175 83960427 -19534547 + B4A SINE B4 10 292 0 8 1225 631 265 27 57 chr15 83960531 83960969 -19534005 - RMER17C LTR ERVK -32 378 3 8 1225 812 211 27 13 chr15 83961209 83961358 -19533616 + RSINE1 SINE B4 15 165 0 8 1225 269 333 105 39 chr15 83961358 83961381 -19533593 + B3A SINE B2 53 198 0 8 1225 1245 82 23 12 chr15 83961516 83961689 -19533285 - B2_Mm2 SINE B2 -19 176 2 8 1225 186 143 0 0 chr15 83963241 83963276 -19531698 + (TC)n Simple_repeat Simple_repeat 2 36 0 8 1225 531 0 0 0 chr15 83963284 83963343 -19531631 + (TG)n Simple_repeat Simple_repeat 1 59 0 8 1225 341 265 39 0 chr15 83963359 83963461 -19531513 - B1F SINE Alu -34 115 10 8 1225 220 283 16 32 chr15 83963412 83963474 -19531500 - B4A SINE B4 -148 144 84 8 1225 573 203 38 38 chr15 83963578 83963602 -19531372 + ID_B1 SINE B4 64 222 -2 8 1225 945 82 15 0 chr15 83963602 83963737 -19531237 + B1_Mus1 SINE Alu 11 147 -1 8 1225 585 0 0 0 chr15 83964321 83964386 -19530588 + (TC)n Simple_repeat Simple_repeat 2 66 0 8 1225 260 232 0 18 chr15 83964389 83964446 -19530528 + RLTR11A2 LTR ERVK 463 518 -9 8 1225 1112 195 0 73 chr15 83964814 83965046 -19529928 + B3 SINE B2 2 216 0 8 1225 383 225 56 110 chr15 83965521 83965715 -19529259 - B3A SINE B2 0 198 5 8 1225 957 247 71 92 chr15 83965718 83966012 -19528962 + MTEa LTR MaLR 58 345 -34 8 1225 297 167 39 65 chr15 83966006 83966019 -19528955 + MTEb LTR MaLR 281 291 -68 8 1225 1006 213 24 9 chr15 83966019 83966232 -19528742 - B3 SINE B2 0 216 1 8 1225 369 175 0 0 chr15 83966232 83966295 -19528679 + MTEb LTR MaLR 311 373 -6 8 1225 1290 109 11 0 chr15 83966299 83966474 -19528500 + B2_Mm1t SINE B2 3 179 -14 8 1225 348 74 355 18 chr15 83966537 83966647 -19528327 + B2_Mm2 SINE B2 47 193 -2 8 1225 607 229 71 7 chr15 83967598 83967728 -19527246 + ORR1D2 LTR MaLR 1 139 -231 8 1225 6006 170 84 21 chr15 83967728 83968913 -19526061 + RMER12 LTR ERVK 1 1707 -101 8 1225 367 274 157 36 chr15 83968919 83969055 -19525919 + ORR1D2 LTR MaLR 135 287 -83 8 1225 1089 83 32 6 chr15 83969055 83969213 -19525761 - URR1A DNA MER1_type 0 226 65 8 1225 1087 43 0 48 chr15 83969223 83969351 -19525623 + B1_Mm SINE Alu 9 136 -11 8 1225 207 0 0 0 chr15 83969351 83969374 -19525600 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 1225 1087 43 0 48 chr15 83969374 83969391 -19525583 + B1_Mm SINE Alu 137 147 0 8 1225 245 171 0 0 chr15 83969406 83969447 -19525527 - URR1A DNA MER1_type -185 41 1 8 1225 395 256 0 22 chr15 83969449 83969541 -19525433 + ORR1D2 LTR MaLR 281 370 0 8 1225 671 309 20 40 chr15 83969874 83970076 -19524898 - ID_B1 SINE B4 0 224 27 8 1225 284 250 52 13 chr15 83970097 83970174 -19524800 - PB1D7 SINE Alu -9 111 32 8 1225 277 241 263 29 chr15 83971179 83971316 -19523658 + B3A SINE B2 7 175 -23 8 1225 333 0 0 0 chr15 83971317 83971354 -19523620 + (CA)n Simple_repeat Simple_repeat 1 37 0 8 1225 270 150 0 0 chr15 83971405 83971445 -19523529 + B3 SINE B2 1 40 -176 8 1225 3654 98 48 39 chr15 83971962 83972524 -19522450 + RMER2 LTR ERV1 1 567 0 8 1225 2928 138 13 126 chr15 83972641 83973237 -19521737 + RLTR24 LTR ERV1 1 529 0 8 1225 446 160 76 102 chr15 83973735 83973853 -19521121 + MT2B LTR ERVL 143 257 -344 8 1225 469 279 53 25 chr15 83973742 83973760 -19521214 + ID_B1 SINE B4 82 151 -141 8 1225 720 148 82 0 chr15 83973760 83973882 -19521092 + B1_Mur3 SINE Alu 12 143 -6 8 1225 469 279 53 25 chr15 83973882 83973903 -19521071 + ID_B1 SINE B4 152 245 -47 8 1225 821 157 0 7 chr15 83973904 83974058 -19520916 + GA-rich Low_complexity Low_complexity 3 155 0 8 1225 917 178 16 58 chr15 83974073 83974264 -19520710 + B2_Mm2 SINE B2 6 188 -7 8 1225 461 47 62 0 chr15 83974654 83974718 -19520256 + B1_Mur4 SINE Alu 78 145 -5 8 1225 279 69 16 49 chr15 83974724 83974785 -19520189 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 8 1225 573 283 25 12 chr15 83975151 83975312 -19519662 + RSINE1 SINE B4 3 165 0 8 1225 32 0 0 0 chr15 83975505 83975537 -19519437 + AT_rich Low_complexity Low_complexity 1 32 0 8 1225 1759 143 27 72 chr15 83976229 83976561 -19518413 + RLTR24 LTR ERV1 1 317 -212 8 1225 1027 70 0 66 chr15 83976566 83976718 -19518256 - B1_Mus2 SINE Alu -1 146 5 8 1225 1012 216 94 0 chr15 83976721 83976934 -19518040 + RLTR24 LTR ERV1 297 529 0 8 1225 3424 30 115 2 chr15 83976968 83977395 -19517579 - IAPLTR2_Mm LTR ERVK 0 475 1 8 1225 6671 44 2 6 chr15 83977397 83978227 -19516747 - IAPEz-int LTR ERVK -2 6479 5653 8 1225 2643 58 0 3 chr15 83978222 83978565 -19516409 - IAPEz-int LTR ERVK -4781 1700 1359 8 1225 3559 79 13 32 chr15 83978565 83979218 -19515756 - IAPEz-int LTR ERVK -5819 662 168 8 1225 255 302 0 0 chr15 83979218 83979271 -19515703 - RLTR27 LTR ERVK -34 275 223 8 1225 1009 115 25 85 chr15 83979271 83979470 -19515504 - IAPEz-int LTR ERVK -6286 195 9 8 1225 3410 30 115 2 chr15 83979471 83979898 -19515076 - IAPLTR2_Mm LTR ERVK 0 475 1 8 1225 201 150 66 16 chr15 83980022 83980083 -19514891 + CT-rich Low_complexity Low_complexity 3 66 0 8 1225 293 146 73 0 chr15 83980703 83980758 -19514216 - B1_Mus1 SINE Alu -88 60 2 8 1225 318 190 3 2 chr15 83980880 83980953 -19514021 + L1_Mur2 LINE L1 5722 5828 -340 8 1225 1654 37 0 0 chr15 83981084 83981272 -19513702 - B2_Mm1a SINE B2 -5 188 1 8 1225 350 162 76 63 chr15 83981333 83981412 -19513562 - L1M2 LINE L1 -3318 2825 2746 8 1225 1186 52 0 0 chr15 83981427 83981563 -19513411 + B1_Mus1 SINE Alu 2 137 -11 8 1225 270 0 0 0 chr15 83981563 83981593 -19513381 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 8 1225 280 326 0 0 chr15 83982599 83982688 -19512286 + PB1D10 SINE Alu 27 115 -2 8 1225 1513 68 16 0 chr15 83982779 83982969 -19512005 - B2_Mm2 SINE B2 0 195 3 8 1225 3657 78 30 24 chr15 83983040 83983478 -19511496 - MusHAL1 LINE L1 -1789 923 475 8 1225 3176 53 24 0 chr15 83983478 83983854 -19511120 + IAPEY_LTR LTR ERVK 1 385 0 8 1225 3657 78 30 24 chr15 83983854 83984006 -19510968 - MusHAL1 LINE L1 -2238 474 329 8 1225 1548 35 0 0 chr15 83984006 83984180 -19510794 + B2_Mm1a SINE B2 1 174 -19 8 1225 418 54 0 0 chr15 83984216 83984272 -19510702 - MusHAL1 LINE L1 -2369 343 288 8 1225 1789 44 43 22 chr15 83984268 83984544 -19510430 + L1VL2 LINE L1 814 1101 -2514 8 1225 1357 54 53 26 chr15 83984544 83984734 -19510240 + B2_Mm2 SINE B2 1 195 0 8 1225 1789 57 0 110 chr15 83984734 83984875 -19510099 + L1VL2 LINE L1 1102 1206 -2409 8 1225 2149 95 7 14 chr15 83984938 83985285 -19509689 + ORR1A2 LTR MaLR 19 346 0 8 1225 730 173 97 8 chr15 83985438 83985477 -19509497 + B1_Mus2 SINE Alu 2 53 -94 8 1225 228 67 0 0 chr15 83985477 83985507 -19509467 + (CAGAGA)n Simple_repeat Simple_repeat 4 33 0 8 1225 730 173 97 8 chr15 83985507 83985601 -19509373 + B1_Mus2 SINE Alu 54 146 -1 8 1225 207 204 0 0 chr15 83985679 83985733 -19509241 + (TA)n Simple_repeat Simple_repeat 1 54 0 9 1225 312 158 0 0 chr15 83985732 83985789 -19509185 + (CA)n Simple_repeat Simple_repeat 2 58 0 9 1225 957 182 13 0 chr15 83985794 83985948 -19509026 - B3A SINE B2 -42 156 1 9 1225 337 205 0 153 chr15 83986002 83986100 -19508874 + RSINE1 SINE B4 83 165 0 9 1225 297 118 0 0 chr15 83986115 83986166 -19508808 + (ATGGTG)n Simple_repeat Simple_repeat 6 56 0 9 1225 493 262 0 0 chr15 83986168 83986271 -19508703 + ID_B1 SINE B4 116 218 -6 9 1225 1337 96 11 0 chr15 83987033 83987211 -19507763 + B2_Mm1t SINE B2 2 181 -12 9 1225 361 214 118 30 chr15 83987238 83987373 -19507601 + B2_Mm2 SINE B2 48 194 -1 9 1225 702 244 65 24 chr15 83987382 83987550 -19507424 + B3 SINE B2 1 175 -41 9 1225 4186 70 3 136 chr15 83987737 83988414 -19506560 + LTRIS_Mus LTR ERV1 1 587 0 9 1225 1378 279 95 44 chr15 83988416 83988752 -19506222 + MuRRS-int LTR ERV1 5 344 -4719 9 1225 206 32 32 0 chr15 83988752 83988783 -19506191 + (TG)n Simple_repeat Simple_repeat 2 33 0 9 1225 2476 115 12 47 chr15 83988783 83989184 -19505790 + MuRRS-int LTR ERV1 719 1108 -3582 9 1225 3010 249 38 36 chr15 83989267 83990450 -19504524 + MuRRS-int LTR ERV1 1118 2792 -2271 9 1225 6121 120 14 17 chr15 83990497 83991444 -19503530 + MuRRS-int LTR ERV1 3747 4690 0 9 1225 4720 73 3 0 chr15 83991444 83992029 -19502945 + LTRIS_Mus LTR ERV1 1 587 0 9 1225 180 0 0 0 chr15 83992923 83992943 -19502031 + (TTTG)n Simple_repeat Simple_repeat 4 23 0 9 1225 812 150 42 28 chr15 83992944 83993088 -19501886 - B1_Mus2 SINE Alu 0 147 2 9 1225 217 94 93 147 chr15 83993160 83993235 -19501739 - PB1D10 SINE Alu 0 117 47 9 1225 812 325 75 11 chr15 83993230 83993588 -19501386 + MER82 DNA MER2_type 263 643 -10 9 1225 368 197 0 14 chr15 83993819 83993891 -19501083 - MTEa LTR MaLR -2 377 307 9 1225 988 32 57 0 chr15 83993902 83994026 -19500948 - B2_Mm2 SINE B2 -1 194 64 9 1225 402 21 0 0 chr15 83994071 83994118 -19500856 + (GA)n Simple_repeat Simple_repeat 1 47 0 9 1225 660 298 62 89 chr15 83994146 83994470 -19500504 - MTEa LTR MaLR -59 320 6 9 1225 671 279 39 0 chr15 83994572 83994780 -19500194 - B3 SINE B2 0 216 1 9 1225 857 246 139 70 chr15 83995199 83995601 -19499373 - RLTR28B LTR ERVL -51 430 1 9 1225 762 160 17 0 chr15 83996235 83996354 -19498620 - B1_Mus1 SINE Alu -27 121 1 9 1225 1266 34 0 0 chr15 83996390 83996537 -19498437 + B1_Mus2 SINE Alu 1 147 0 9 1225 579 218 45 0 chr15 83996635 83996745 -19498229 + B3 SINE B2 2 116 -100 9 1225 446 269 9 37 chr15 83996835 83996943 -19498031 + B3 SINE B2 112 216 0 9 1225 1547 47 5 15 chr15 83996979 83997174 -19497800 + B2_Mm1t SINE B2 1 193 0 9 1225 249 322 9 43 chr15 83997365 83997473 -19497501 + PB1 SINE Alu 7 115 -5 9 1225 377 236 0 0 chr15 83997485 83997561 -19497413 + ID4 SINE ID 13 88 -64 9 1225 929 237 20 0 chr15 83997561 83997759 -19497215 + B3 SINE B2 1 202 -14 9 1225 591 112 0 0 chr15 83997789 83997878 -19497096 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 9 1225 1143 164 50 18 chr15 83999729 83999947 -19495027 + URR1B DNA MER1_type 1 225 0 9 1225 1218 41 0 20 chr15 84000525 84000674 -19494300 + B1_Mus2 SINE Alu 2 147 0 1 1225 231 114 0 0 chr15 84000674 84000709 -19494265 + (A)n Simple_repeat Simple_repeat 1 35 0 2 1225 552 280 125 16 chr15 84000721 84000903 -19494071 + B3 SINE B2 4 208 -8 3 1225 216 0 0 0 chr15 84000903 84000927 -19494047 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1225 189 0 0 0 chr15 84001187 84001208 -19493766 + (TA)n Simple_repeat Simple_repeat 2 22 0 5 1225 234 270 215 7 chr15 84001210 84001359 -19493615 - MER33 DNA MER1_type -49 275 96 6 1225 1361 78 16 16 chr15 84002684 84002878 -19492096 + B2_Mm2 SINE B2 2 195 0 7 1225 715 113 0 17 chr15 84002886 84003003 -19491971 + B1_Mur3 SINE Alu 35 149 0 8 1225 566 230 41 54 chr15 84003554 84003701 -19491273 - B1_Mur2 SINE Alu 0 149 5 9 1225 258 192 58 0 chr15 84003925 84003977 -19490997 + PB1D10 SINE Alu 49 103 -14 1 1225 324 253 13 0 chr15 84003979 84004054 -19490920 + PB1D10 SINE Alu 6 81 -36 1 1225 1216 62 0 0 chr15 84004083 84004229 -19490745 + B1_Mus1 SINE Alu 2 147 -1 1 1225 222 123 33 50 chr15 84004230 84004290 -19490684 + A-rich Low_complexity Low_complexity 6 64 0 1 1225 1396 249 13 70 chr15 84005144 84005541 -19489433 - MTE2a LTR MaLR 0 379 6 1 1225 425 267 19 0 chr15 84005557 84005662 -19489312 + PB1D10 SINE Alu 11 117 0 1 1225 676 183 118 35 chr15 84005680 84005850 -19489124 + B2_Mm2 SINE B2 3 186 -9 1 1225 458 347 100 0 chr15 84005866 84006024 -19488950 + B3A SINE B2 5 179 -19 1 1225 1023 94 0 86 chr15 84006024 84006173 -19488801 + B1_Mur4 SINE Alu 2 139 -11 1 1225 197 0 0 67 chr15 84006173 84006203 -19488771 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1 1225 1023 94 0 86 chr15 84006203 84006216 -19488758 + B1_Mur4 SINE Alu 140 150 0 1 1225 458 342 75 80 chr15 84006216 84006270 -19488704 + B3A SINE B2 176 216 0 1 1225 438 217 54 0 chr15 84006316 84006408 -19488566 + PB1D9 SINE Alu 23 119 -1 2 1225 515 310 51 6 chr15 84006423 84006579 -19488395 + RSINE1 SINE B4 3 165 0 2 1225 474 286 16 0 chr15 84006690 84006816 -19488158 - ZP3AR Satellite Satellite -41 171 44 2 1225 252 111 0 0 chr15 84007528 84007573 -19487401 + (C)n Simple_repeat Simple_repeat 1 45 0 2 1225 228 330 0 57 chr15 84007881 84007892 -19487082 + B4A SINE B4 75 79 -213 2 1225 300 291 7 55 chr15 84007892 84008044 -19486930 + PB1 SINE Alu 1 134 -15 2 1225 519 201 22 0 chr15 84008044 84008183 -19486791 + (TG)n Simple_repeat Simple_repeat 2 143 0 2 1225 321 221 0 81 chr15 84008207 84008281 -19486693 + ID4_ SINE ID 3 70 -13 2 1225 238 200 40 0 chr15 84008288 84008338 -19486636 + A-rich Low_complexity Low_complexity 4 55 0 2 1225 258 236 0 5 chr15 84008466 84008541 -19486433 + B1F SINE Alu 44 149 0 2 1225 202 302 0 0 chr15 84008655 84008708 -19486266 + MIRc SINE MIR 51 103 -165 3 1225 1564 151 86 146 chr15 84008740 84009159 -19485815 - ORR1B1 LTR MaLR 0 394 1 3 1225 190 333 108 0 chr15 84009394 84009487 -19485487 - MIRc SINE MIR -115 153 51 3 1225 431 206 91 20 chr15 84009941 84010040 -19484934 + ID_B1 SINE B4 118 223 -1 3 1225 857 212 0 0 chr15 84010160 84010306 -19484668 + B1_Mus1 SINE Alu 3 148 0 3 1225 348 68 0 0 chr15 84010306 84010350 -19484624 + (GAAA)n Simple_repeat Simple_repeat 4 47 0 3 1225 1033 113 6 6 chr15 84010350 84010432 -19484542 + (GA)n Simple_repeat Simple_repeat 2 84 0 3 1225 1179 68 7 0 chr15 84010432 84010578 -19484396 + B1_Mus1 SINE Alu 1 147 -1 3 1225 1033 113 6 6 chr15 84010578 84010664 -19484310 + (GA)n Simple_repeat Simple_repeat 1 86 0 3 1225 297 248 92 37 chr15 84010703 84010812 -19484162 + MLT1A0 LTR MaLR 200 314 -51 3 1225 553 238 17 57 chr15 84011841 84011999 -19482975 + ID_B1 SINE B4 83 242 -50 4 1225 298 245 10 19 chr15 84012056 84012160 -19482814 + GA-rich Low_complexity Low_complexity 4 106 0 4 1225 470 226 18 24 chr15 84012191 84012359 -19482615 + GA-rich Low_complexity Low_complexity 3 169 0 4 1225 291 114 23 0 chr15 84012359 84012403 -19482571 + (GGA)n Simple_repeat Simple_repeat 3 47 0 4 1225 316 271 97 36 chr15 84012856 84012909 -19482065 - ID_B1 SINE B4 -45 247 87 4 1225 558 198 40 0 chr15 84012909 84013010 -19481964 - B1_Mur4 SINE Alu -44 106 2 4 1225 198 0 0 0 chr15 84014026 84014048 -19480926 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 1225 299 314 19 0 chr15 84014070 84014163 -19480811 - PB1D10 SINE Alu -49 100 3 4 1225 554 280 0 22 chr15 84014207 84014342 -19480632 - RSINE1 SINE B4 -23 142 11 4 1225 424 273 62 8 chr15 84014360 84014489 -19480485 - B1F2 SINE Alu -8 141 5 4 1225 226 321 63 18 chr15 84015009 84015120 -19479854 - RMER10B LTR ERVL -11 387 272 4 1225 622 126 0 0 chr15 84015746 84015841 -19479133 - B2_Mm2 SINE B2 -97 98 4 5 1225 245 305 19 9 chr15 84016126 84016232 -19478742 + GA-rich Low_complexity Low_complexity 2 108 0 5 1226 1728 128 54 168 chr15 84017194 84017529 -19477445 - RLTR15 LTR ERVK 0 359 56 5 1226 1188 62 0 0 chr15 84017529 84017674 -19477300 - B1_Mm SINE Alu 0 147 3 5 1226 1728 128 54 168 chr15 84017674 84017743 -19477231 - RLTR15 LTR ERVK -304 55 1 5 1226 1032 206 26 35 chr15 84019348 84019574 -19475400 + ID_B1 SINE B4 1 224 0 5 1226 309 250 87 0 chr15 84020081 84020173 -19474801 - B1F1 SINE Alu -26 123 24 5 1226 267 331 81 22 chr15 84020173 84020213 -19474761 - ID_B1 SINE B4 -19 201 62 5 1226 968 201 88 9 chr15 84020489 84020705 -19474269 + RLTR42 LTR ERVK 7 239 0 5 1226 416 169 24 0 chr15 84021178 84021261 -19473713 - B1_Mus2 SINE Alu 0 147 63 5 1226 1354 98 5 11 chr15 84021690 84021876 -19473098 + B2_Mm1a SINE B2 1 185 -8 5 1226 762 178 0 15 chr15 84021885 84022016 -19472958 + B1_Mur4 SINE Alu 5 133 -17 6 1226 1173 36 14 0 chr15 84022035 84022173 -19472801 + B1_Mus1 SINE Alu 2 141 -7 6 1226 441 252 10 0 chr15 84022238 84022337 -19472637 - RSINE1 SINE B4 -54 111 12 6 1226 182 111 0 0 chr15 84022929 84022956 -19472018 - MIRm SINE MIR -166 110 84 6 1226 289 262 30 166 chr15 84023074 84023103 -19471871 - RSINE1 SINE B4 -7 158 126 6 1226 741 186 81 29 chr15 84023103 84023275 -19471699 - B3A SINE B2 -16 182 2 6 1226 289 262 30 166 chr15 84023275 84023296 -19471678 - RSINE1 SINE B4 -40 125 125 6 1226 249 108 0 0 chr15 84023296 84023333 -19471641 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1226 289 262 30 166 chr15 84023333 84023450 -19471524 - RSINE1 SINE B4 -40 125 13 6 1226 321 234 104 21 chr15 84023710 84023806 -19471168 - B1F SINE Alu -23 126 23 6 1226 733 236 7 20 chr15 84023813 84023964 -19471010 + B1_Mur1 SINE Alu 1 149 0 6 1226 368 274 67 17 chr15 84024536 84024655 -19470319 + ID_B1 SINE B4 84 208 -16 7 1226 321 26 0 0 chr15 84024707 84024745 -19470229 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1226 370 256 0 0 chr15 84024777 84024855 -19470119 + B1F SINE Alu 1 78 -71 7 1226 257 164 36 0 chr15 84025482 84025537 -19469437 - B1F1 SINE Alu -92 57 1 7 1226 233 268 28 0 chr15 84025537 84025553 -19469421 - ID_B1 SINE B4 -86 138 66 7 1226 1027 39 0 85 chr15 84025789 84025930 -19469044 - B1_Mus1 SINE Alu -16 132 4 7 1226 424 257 113 69 chr15 84026529 84026688 -19468286 + B3 SINE B2 47 212 -4 7 1226 205 211 0 0 chr15 84026741 84026779 -19468195 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 7 1226 212 182 0 0 chr15 84026809 84026853 -19468121 - ID4 SINE ID -38 45 2 7 1226 937 189 70 0 chr15 84027100 84027285 -19467689 + B3 SINE B2 2 199 -17 7 1226 21 0 0 0 chr15 84028570 84028591 -19466383 + AT_rich Low_complexity Low_complexity 1 21 0 8 1226 356 212 43 0 chr15 84028630 84028727 -19466247 - B1F1 SINE Alu -6 111 14 8 1226 526 171 165 33 chr15 84029491 84029612 -19465362 + B1_Mur1 SINE Alu 12 148 -1 8 1226 322 250 225 0 chr15 84030050 84030170 -19464804 - RSINE1 SINE B4 -2 163 17 8 1226 2451 121 45 37 chr15 84033830 84034234 -19460740 - MTB_Mm LTR MaLR 0 407 1 8 1226 211 306 16 0 chr15 84035121 84035183 -19459791 + (CCCA)n Simple_repeat Simple_repeat 2 64 0 8 1226 1702 153 176 6 chr15 84035260 84035595 -19459379 - ORR1B1 LTR MaLR -2 392 1 8 1226 290 169 15 0 chr15 84035953 84036018 -19458956 + (TGGA)n Simple_repeat Simple_repeat 3 68 0 8 1226 1371 65 43 21 chr15 84037509 84037697 -19457277 - B2_Mm2 SINE B2 -3 192 1 8 1226 276 200 0 0 chr15 84037744 84037799 -19457175 + PB1D9 SINE Alu 1 55 -65 8 1226 1080 35 0 27 chr15 84038067 84038213 -19456761 - B1_Mus1 SINE Alu 0 148 7 9 1226 1063 80 0 91 chr15 84038883 84039048 -19455926 - B1_Mur4 SINE Alu 0 150 1 9 1226 2747 141 23 7 chr15 84039054 84039489 -19455485 - Lx4A LINE L1 0 7058 6617 9 1226 880 158 55 28 chr15 84039675 84039857 -19455117 + B3 SINE B2 1 187 -29 9 1226 633 176 95 7 chr15 84039875 84040012 -19454962 - B1_Mur2 SINE Alu 0 149 1 9 1226 252 233 110 0 chr15 84045486 84045559 -19449415 - PB1D7 SINE Alu -34 86 6 9 1226 257 290 14 14 chr15 84045632 84045702 -19449272 + B4A SINE B4 87 156 -136 9 1226 479 248 30 0 chr15 84045640 84045741 -19449233 + PB1D7 SINE Alu 11 114 -6 9 1226 384 309 31 8 chr15 84045780 84045907 -19449067 - B1_Mm SINE Alu -10 137 8 9 1226 794 226 30 0 chr15 84045823 84045991 -19448983 - ID_B1 SINE B4 -49 175 3 9 1226 925 221 20 10 chr15 84046144 84046341 -19448633 - B3 SINE B2 0 216 18 1 1226 370 178 50 0 chr15 84046387 84046488 -19448486 + B1_Mur3 SINE Alu 44 149 0 1 1226 378 0 0 0 chr15 84046669 84046711 -19448263 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1226 740 294 76 22 chr15 84047600 84047917 -19447057 - Charlie1a DNA MER1_type -621 834 501 1 1226 229 239 0 90 chr15 84048157 84048235 -19446739 - B1F SINE Alu 0 149 79 1 1226 461 207 73 98 chr15 84048266 84048389 -19446585 + PB1D9 SINE Alu 1 120 0 1 1226 207 0 0 0 chr15 84050046 84050069 -19444905 + (TTG)n Simple_repeat Simple_repeat 3 25 0 1 1226 865 185 119 21 chr15 84050075 84050268 -19444706 - ID_B1 SINE B4 -10 214 3 1 1226 363 194 46 17 chr15 84050430 84050603 -19444371 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 1 1226 821 241 6 6 chr15 84051206 84051381 -19443593 - B3A SINE B2 -22 176 2 1 1226 180 0 0 0 chr15 84051507 84051527 -19443447 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1226 253 314 29 65 chr15 84051537 84051565 -19443409 - YREP_Mm Unknown Unknown -1478 334 234 1 1226 827 126 16 0 chr15 84051565 84051692 -19443282 + B1_Mus1 SINE Alu 10 138 -10 1 1226 253 314 29 65 chr15 84051692 84051707 -19443267 - YREP_Mm Unknown Unknown -1478 233 171 1 1226 518 317 24 0 chr15 84051721 84051888 -19443086 + B3 SINE B2 46 216 0 1 1226 186 297 122 0 chr15 84052155 84052229 -19442745 - MIRb SINE MIR -174 94 12 1 1226 830 159 22 2 chr15 84052461 84052873 -19442101 + (TG)n Simple_repeat Simple_repeat 1 419 0 1 1226 387 0 0 0 chr15 84052873 84052916 -19442058 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 1226 830 116 23 0 chr15 84052916 84052924 -19442050 + (TG)n Simple_repeat Simple_repeat 2 9 0 1 1226 1180 183 40 0 chr15 84053288 84053490 -19441484 + B3 SINE B2 4 213 -3 1 1226 637 61 20 0 chr15 84053604 84053703 -19441271 + (CA)n Simple_repeat Simple_repeat 2 102 0 1 1226 243 0 0 0 chr15 84053838 84053865 -19441109 + (CCTG)n Simple_repeat Simple_repeat 1 27 0 1 1226 241 325 0 13 chr15 84054070 84054148 -19440826 + MT2A LTR ERVL 317 393 -140 1 1226 335 188 125 0 chr15 84054107 84054187 -19440787 - B3 SINE B2 -126 90 1 1 1226 270 161 36 0 chr15 84054187 84054239 -19440735 - B1_Mur4 SINE Alu -95 55 2 1 1226 328 139 0 25 chr15 84055543 84055624 -19439350 + (TA)n Simple_repeat Simple_repeat 2 80 0 1 1226 493 245 62 7 chr15 84055682 84055826 -19439148 + ORR1E LTR MaLR 1 152 -207 1 1226 353 75 19 0 chr15 84055828 84055881 -19439093 + (TTTTC)n Simple_repeat Simple_repeat 2 55 0 1 1226 794 68 246 0 chr15 84055881 84055999 -19438975 - B1_Mus1 SINE Alu 0 148 2 1 1226 786 165 83 30 chr15 84056158 84056327 -19438647 + B2_Mm2 SINE B2 1 178 -17 1 1226 324 188 14 55 chr15 84056343 84056416 -19438558 + ORR1E LTR MaLR 307 376 -3 1 1226 554 155 61 35 chr15 84056852 84057001 -19437973 + ORR1D2 LTR MaLR 256 370 0 1 1226 330 26 0 0 chr15 84057012 84057051 -19437923 + (CCCCAG)n Simple_repeat Simple_repeat 5 43 0 1 1226 412 220 65 0 chr15 84057857 84057950 -19437024 - B4 SINE B4 0 292 209 1 1226 400 344 26 0 chr15 84057950 84057977 -19436997 - B3A SINE B2 -1 197 170 1 1226 306 73 0 0 chr15 84057977 84058018 -19436956 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1226 400 344 26 0 chr15 84058018 84058141 -19436833 - B3A SINE B2 -29 169 44 1 1226 1454 97 0 10 chr15 84058152 84058349 -19436625 - B2_Mm2 SINE B2 0 195 1 1 1226 1001 122 0 20 chr15 84058390 84058540 -19436434 - B1_Mur4 SINE Alu -1 149 3 1 1226 263 79 0 0 chr15 84058544 84058582 -19436392 - B3 SINE B2 -177 39 2 1 1226 608 259 15 55 chr15 84058606 84058806 -19436168 - B4 SINE B4 -69 223 32 1 1226 220 244 0 0 chr15 84059246 84059287 -19435687 + B2_Mm2 SINE B2 2 42 -153 1 1226 1235 179 178 77 chr15 84059287 84059345 -19435629 - ORR1D1 LTR MaLR 0 374 322 1 1226 1033 166 193 0 chr15 84059345 84059526 -19435448 - B3 SINE B2 0 216 1 1 1226 1235 179 178 77 chr15 84059526 84059637 -19435337 - ORR1D1 LTR MaLR -53 321 195 1 1226 264 59 0 0 chr15 84059637 84059671 -19435303 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1226 216 0 0 0 chr15 84059671 84059694 -19435280 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 1226 1235 179 178 77 chr15 84059694 84059860 -19435114 - ORR1D1 LTR MaLR -180 194 4 1 1226 377 286 166 19 chr15 84059861 84060018 -19434956 + B3 SINE B2 37 216 0 1 1226 314 147 117 26 chr15 84060670 84060747 -19434227 - MTE2b LTR MaLR -34 345 262 1 1226 276 238 32 0 chr15 84060782 84060845 -19434129 - MT2A LTR ERVL -360 173 109 1 1226 772 175 20 27 chr15 84060845 84060992 -19433982 - MT2A LTR ERVL -387 146 1 1 1226 207 51 0 71 chr15 84061021 84061063 -19433911 + (TGGGGG)n Simple_repeat Simple_repeat 1 39 0 1 1226 331 310 22 52 chr15 84061063 84061199 -19433775 - MTE2b LTR MaLR -242 137 6 1 1226 1155 88 0 0 chr15 84063979 84064126 -19430848 - B1_Mus1 SINE Alu 0 148 2 1 1226 336 233 96 10 chr15 84064129 84064233 -19430741 - PB1 SINE Alu -2 125 13 1 1226 277 261 43 14 chr15 84064503 84064573 -19430401 - B4A SINE B4 -2 290 219 1 1226 387 154 26 0 chr15 84064584 84064701 -19430273 + (TCTA)n Simple_repeat Simple_repeat 2 121 0 1 1226 1522 73 0 0 chr15 84064714 84064906 -19430068 - B2_Mm1t SINE B2 0 193 2 1 1226 324 111 61 0 chr15 84064909 84065008 -19429966 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 1 1226 207 0 0 0 chr15 84065010 84065033 -19429941 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 1226 370 276 103 0 chr15 84065043 84065159 -19429815 - B1_Mur1 SINE Alu -21 128 1 1 1226 523 235 113 88 chr15 84065159 84065377 -19429597 - B4A SINE B4 -63 229 6 1 1226 297 0 0 0 chr15 84066431 84066464 -19428510 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1226 1002 67 0 0 chr15 84066557 84066692 -19428282 + (TCCA)n Simple_repeat Simple_repeat 2 136 0 1 1226 1082 84 29 24 chr15 84066925 84067095 -19427879 - B2_Mm2 SINE B2 -23 172 2 1 1226 711 116 0 76 chr15 84067098 84067229 -19427745 - B1_Mur4 SINE Alu 0 150 30 1 1226 189 0 0 0 chr15 84067255 84067276 -19427698 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1226 359 200 50 42 chr15 84067280 84067400 -19427574 - L1MC2 LINE L1 -379 5965 5845 1 1226 437 260 10 0 chr15 84067404 84067504 -19427470 - ID_B1 SINE B4 -123 101 1 1 1226 186 43 0 0 chr15 84067579 84067602 -19427372 + (AGGGGG)n Simple_repeat Simple_repeat 2 24 0 1 1226 344 235 154 49 chr15 84067778 84067921 -19427053 - MTD LTR MaLR -261 158 1 1 1226 25 0 0 0 chr15 84069769 84069794 -19425180 + GC_rich Low_complexity Low_complexity 1 25 0 1 1226 596 249 174 33 chr15 84070388 84070544 -19424430 - MTE2a LTR MaLR 0 379 195 1 1226 2969 55 42 8 chr15 84070544 84070927 -19424047 - MTA_Mm LTR MaLR 0 396 1 1 1226 596 249 174 33 chr15 84070927 84071040 -19423934 - MTE2a LTR MaLR -185 194 72 1 1226 1144 99 174 25 chr15 84071040 84071236 -19423738 - URR1B DNA MER1_type 0 225 1 1 1226 675 261 42 0 chr15 84071242 84071407 -19423567 + B3A SINE B2 1 172 -26 1 1226 341 149 0 15 chr15 84072310 84072378 -19422596 + CT-rich Low_complexity Low_complexity 3 69 0 1 1226 381 102 0 0 chr15 84072433 84072492 -19422482 + (TATG)n Simple_repeat Simple_repeat 4 62 0 1 1226 514 284 128 89 chr15 84072492 84072560 -19422414 - MTE2a LTR MaLR -1 378 318 1 1226 279 0 0 0 chr15 84072560 84072591 -19422383 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 1226 1239 41 0 0 chr15 84072591 84072736 -19422238 - B1_Mus1 SINE Alu -3 145 1 1 1226 514 284 128 89 chr15 84072736 84072802 -19422172 - MTE2a LTR MaLR -62 317 236 1 1226 663 13 0 0 chr15 84072802 84072878 -19422096 + (CACAT)n Simple_repeat Simple_repeat 1 76 0 1 1226 514 289 117 90 chr15 84072878 84073078 -19421896 - MTE2a LTR MaLR -144 235 35 1 1226 929 137 20 20 chr15 84073124 84073273 -19421701 - B1_Mur4 SINE Alu -1 149 1 1 1226 1074 147 15 45 chr15 84073655 84073855 -19421119 - B2_Mm2 SINE B2 0 195 2 1 1226 1399 40 91 0 chr15 84074041 84074216 -19420758 - B2_Mm2 SINE B2 -4 191 1 1 1226 272 27 27 0 chr15 84075187 84075224 -19419750 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 1 1226 1081 82 25 0 chr15 84075224 84075383 -19419591 - B2_Mm1t SINE B2 -30 163 1 1 1226 217 224 40 0 chr15 84076260 84076336 -19418638 + (TA)n Simple_repeat Simple_repeat 1 79 0 1 1226 1004 276 121 9 chr15 84076399 84076819 -19418155 + L1MB8 LINE L1 5710 6176 -2 1 1226 381 22 0 0 chr15 84076867 84076913 -19418061 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1226 210 105 0 0 chr15 84076967 84077005 -19417969 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 1 1226 225 250 200 0 chr15 84077005 84077085 -19417889 - B4A SINE B4 -73 219 124 1 1226 183 80 0 0 chr15 84077415 84077440 -19417534 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 1 1226 1018 213 13 79 chr15 84077848 84078077 -19416897 - B3 SINE B2 0 216 3 1 1226 245 126 0 0 chr15 84078769 84078811 -19416163 - MIR SINE MIR -114 154 110 1 1226 1478 69 5 0 chr15 84079071 84079259 -19415715 - B2_Mm1a SINE B2 -3 190 2 1 1226 333 0 0 0 chr15 84079622 84079659 -19415315 + (TTG)n Simple_repeat Simple_repeat 2 38 0 1 1226 354 228 9 82 chr15 84079741 84079851 -19415123 - PB1D10 SINE Alu -5 112 11 1 1226 374 297 93 0 chr15 84080230 84080348 -19414626 - MER58A DNA MER1_type -61 163 35 1 1226 207 69 0 0 chr15 84080456 84080485 -19414489 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 1 1226 180 111 0 0 chr15 84080512 84080539 -19414435 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 1226 752 270 47 84 chr15 84080546 84080626 -19414348 - B4A SINE B4 0 292 231 1 1226 243 0 0 0 chr15 84080626 84080653 -19414321 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 1 1226 758 232 126 11 chr15 84080653 84080836 -19414138 - B3 SINE B2 -11 205 2 1 1226 752 270 47 84 chr15 84080836 84081053 -19413921 - B4A SINE B4 -62 230 6 1 1226 400 237 41 0 chr15 84081152 84081249 -19413725 + B4A SINE B4 16 116 -176 1 1226 443 183 32 21 chr15 84081422 84081517 -19413457 - PB1D10 SINE Alu -1 116 21 1 1226 351 255 40 10 chr15 84082404 84082503 -19412471 + B1F SINE Alu 27 128 -21 1 1226 545 257 14 28 chr15 84082526 84082670 -19412304 + B1F SINE Alu 1 142 -7 1 1226 522 254 151 56 chr15 84082684 84082863 -19412111 + B3A SINE B2 3 198 0 2 1226 387 262 99 86 chr15 84082876 84082938 -19412036 - CYRA11_Mm Unknown Y-chromosome -230 387 195 2 1226 803 103 0 99 chr15 84082938 84083089 -19411885 + URR1B DNA MER1_type 88 223 -2 2 1226 1193 82 0 12 chr15 84083439 84083611 -19411363 - B2_Mm2 SINE B2 -25 170 1 2 1226 458 353 40 60 chr15 84084612 84084913 -19410061 + MER82 DNA MER2_type 352 646 -7 2 1226 1273 119 0 44 chr15 84085226 84085429 -19409545 - B2_Mm2 SINE B2 0 195 2 2 1226 415 283 152 24 chr15 84085597 84085807 -19409167 - MER21B LTR ERV1 -608 255 19 2 1226 181 316 57 66 chr15 84086661 84086783 -19408191 - MIRc SINE MIR -14 254 134 2 1226 324 260 123 19 chr15 84086936 84087042 -19407932 + PB1D10 SINE Alu 1 117 0 2 1226 312 290 174 8 chr15 84087935 84088067 -19406907 - RSINE1 SINE B4 -10 155 2 2 1226 245 302 94 6 chr15 84088245 84088363 -19406611 - MIR SINE MIR -113 163 33 2 1226 346 169 204 31 chr15 84088451 84088549 -19406425 - MTEb LTR MaLR -14 365 251 2 1226 207 167 0 0 chr15 84088584 84088626 -19406348 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1226 924 109 50 14 chr15 84089772 84089912 -19405062 - B1_Mur2 SINE Alu 0 149 5 2 1226 424 259 8 57 chr15 84090309 84090432 -19404542 + PB1D10 SINE Alu 1 117 0 2 1226 398 188 11 23 chr15 84091775 84091862 -19403112 + PB1D10 SINE Alu 2 87 -30 2 1226 311 276 16 65 chr15 84091776 84091865 -19403109 + ID_B1 SINE B4 84 172 -52 2 1226 2627 116 79 15 chr15 84091865 84092258 -19402716 + MTC LTR MaLR 4 421 0 2 1226 311 276 16 65 chr15 84092258 84092272 -19402702 + ID_B1 SINE B4 173 181 -43 2 1226 373 232 14 0 chr15 84092272 84092341 -19402633 + ID4 SINE ID 2 71 -12 2 1226 311 276 16 65 chr15 84092341 84092360 -19402614 + ID_B1 SINE B4 182 200 -24 2 1226 1318 80 111 43 chr15 84093524 84093732 -19401242 - URR1A DNA MER1_type 0 226 5 2 1226 324 0 0 0 chr15 84094051 84094087 -19400887 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1226 180 0 0 0 chr15 84096095 84096115 -19398859 + (G)n Simple_repeat Simple_repeat 1 20 0 2 1226 22 0 0 0 chr15 84096806 84096828 -19398146 + AT_rich Low_complexity Low_complexity 1 22 0 2 1226 504 294 22 7 chr15 84097040 84097177 -19397797 - ID_B1 SINE B4 -10 214 76 2 1226 188 310 38 48 chr15 84098100 84098205 -19396769 - MIRb SINE MIR -62 206 103 2 1226 567 219 52 75 chr15 84098676 84098850 -19396124 - B4A SINE B4 -51 241 73 2 1226 732 143 52 22 chr15 84098852 84098988 -19395986 - B1_Mus1 SINE Alu -3 145 6 2 1226 523 257 89 98 chr15 84098988 84099076 -19395898 - B4 SINE B4 -70 222 1 2 1226 263 284 0 0 chr15 84099622 84099696 -19395278 - L1M3 LINE L1 -425 5758 5685 2 1226 423 0 0 0 chr15 84100197 84100244 -19394730 + (TC)n Simple_repeat Simple_repeat 1 47 0 2 1226 315 0 0 0 chr15 84100374 84100409 -19394565 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1226 253 304 175 55 chr15 84100898 84101190 -19393784 - MER54A LTR ERVL -570 331 5 2 1226 226 287 54 81 chr15 84101600 84101748 -19393226 - LTR9 LTR ERV1 -320 292 149 2 1226 2606 55 31 88 chr15 84102206 84102455 -19392519 - MTB_Mm LTR MaLR 0 407 195 2 1226 1238 47 0 0 chr15 84102455 84102603 -19392371 - B1_Mus1 SINE Alu 0 148 1 2 1226 2606 55 31 88 chr15 84102603 84102774 -19392200 - MTB_Mm LTR MaLR -213 194 11 2 1226 1575 62 0 0 chr15 84104146 84104338 -19390636 + B2_Mm1a SINE B2 2 193 0 2 1226 1227 273 68 20 chr15 84104622 84105022 -19389952 + MTD LTR MaLR 1 419 0 2 1226 515 90 13 0 chr15 84105516 84105594 -19389380 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 2 1226 1547 7 19 7 chr15 84105594 84105903 -19389071 + (TTCCC)n Simple_repeat Simple_repeat 1 312 0 2 1226 486 0 0 0 chr15 84105903 84105957 -19389017 + (TCCCC)n Simple_repeat Simple_repeat 2 55 0 2 1226 366 23 0 0 chr15 84105957 84105999 -19388975 + (TTTC)n Simple_repeat Simple_repeat 3 45 0 2 1226 1055 245 39 78 chr15 84106002 84106334 -19388640 - MTE2a LTR MaLR -55 324 6 2 1226 963 138 7 20 chr15 84106339 84106487 -19388487 + B1_Mus1 SINE Alu 3 148 0 2 1226 190 167 33 0 chr15 84106507 84106567 -19388407 + A-rich Low_complexity Low_complexity 2 63 0 2 1226 458 318 58 41 chr15 84106659 84106902 -19388072 + MLT1D LTR MaLR 250 496 -9 2 1226 1373 85 16 0 chr15 84107083 84107272 -19387702 - B2_Mm1t SINE B2 0 193 2 2 1226 244 336 31 23 chr15 84110180 84110308 -19384666 - L2 LINE L2 -363 3056 2928 2 1226 1488 213 129 6 chr15 84110583 84110947 -19384027 - MTD LTR MaLR -10 409 1 2 1226 3209 180 23 18 chr15 84112308 84112869 -19382105 - RLTR12A LTR ERVK -4 564 1 2 1226 508 228 8 50 chr15 84114061 84114181 -19380793 + PB1D10 SINE Alu 3 117 0 2 1226 1134 188 39 5 chr15 84114574 84114782 -19380192 - B3 SINE B2 0 216 2 2 1226 207 303 72 18 chr15 84115131 84115242 -19379732 - L2 LINE L2 -562 2857 2741 2 1226 513 277 95 0 chr15 84115580 84115728 -19379246 + RSINE1 SINE B4 2 163 -2 2 1226 1010 123 0 0 chr15 84115771 84115909 -19379065 - B1_Mus1 SINE Alu -10 138 1 2 1226 264 100 0 0 chr15 84116281 84116321 -19378653 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1226 875 254 5 65 chr15 84116322 84116537 -19378437 - B4A SINE B4 -23 269 68 2 1226 442 224 26 8 chr15 84116523 84116640 -19378334 - B3A SINE B2 -79 119 1 2 1226 195 42 0 0 chr15 84117396 84117420 -19377554 + (GGA)n Simple_repeat Simple_repeat 1 24 0 2 1226 223 253 133 0 chr15 84117470 84117545 -19377429 - RSINE1 SINE B4 -2 163 79 2 1226 454 184 144 88 chr15 84118012 84118106 -19376868 + MTC LTR MaLR 2 106 -315 2 1226 613 212 217 26 chr15 84118106 84118295 -19376679 + URR1B DNA MER1_type 1 225 0 2 1226 454 184 144 88 chr15 84118295 84118325 -19376649 + MTC LTR MaLR 107 133 -288 2 1226 496 220 144 0 chr15 84118326 84118458 -19376516 + MTC LTR MaLR 271 421 0 2 1226 248 176 39 0 chr15 84118461 84118512 -19376462 + MLT1B LTR MaLR 45 97 -293 2 1226 1023 31 0 0 chr15 84118501 84118631 -19376343 + B1_Mus2 SINE Alu 18 147 0 2 1226 225 94 0 0 chr15 84118631 84118663 -19376311 + (A)n Simple_repeat Simple_repeat 1 32 0 2 1226 1085 74 0 0 chr15 84119256 84119391 -19375583 + B1_Mus1 SINE Alu 4 138 -10 2 1226 819 101 0 0 chr15 84119391 84119510 -19375464 + (CAAAA)n Simple_repeat Simple_repeat 2 120 0 2 1226 303 203 0 158 chr15 84119710 84119786 -19375188 - PB1D9 SINE Alu -8 112 49 2 1226 1437 78 5 15 chr15 84119834 84120029 -19374945 - B2_Mm2 SINE B2 -2 193 1 2 1226 264 30 0 0 chr15 84120140 84120173 -19374801 + (TCTG)n Simple_repeat Simple_repeat 4 36 0 2 1226 255 31 0 0 chr15 84120200 84120232 -19374742 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1226 450 284 131 47 chr15 84120239 84120453 -19374521 - Lx9 LINE L1 -230 7414 7183 2 1226 230 227 107 0 chr15 84120469 84120544 -19374430 - RSINE1 SINE B4 -41 124 42 2 1226 756 241 98 51 chr15 84121189 84121464 -19373510 - B4A SINE B4 0 292 5 2 1226 592 214 27 0 chr15 84121467 84121579 -19373395 - ID_B1 SINE B4 -5 219 105 2 1226 313 291 35 0 chr15 84121504 84121590 -19373384 - PB1D7 SINE Alu -19 101 13 2 1226 250 287 0 122 chr15 84122263 84122378 -19372596 + MT2B LTR ERVL 136 236 -365 2 1226 567 181 116 16 chr15 84122302 84122431 -19372543 + B1_Mur1 SINE Alu 7 148 -1 2 1226 1305 97 17 0 chr15 84122597 84122772 -19372202 + B2_Mm1t SINE B2 2 179 -14 2 1226 325 161 316 18 chr15 84122820 84122934 -19372040 + B2_Mm2 SINE B2 48 195 0 2 1226 1327 107 21 5 chr15 84122941 84123129 -19371845 + B2_Mm2 SINE B2 1 191 -4 2 1226 205 328 0 15 chr15 84123903 84123968 -19371006 - MIRm SINE MIR -2 274 211 2 1226 204 40 0 0 chr15 84124690 84124715 -19370259 + (CTCG)n Simple_repeat Simple_repeat 1 25 0 2 1226 203 188 0 59 chr15 84124786 84124837 -19370137 + C-rich Low_complexity Low_complexity 1 48 0 2 1226 780 316 33 5 chr15 84126307 84126384 -19368590 + B4A SINE B4 2 84 -208 2 1226 303 122 0 0 chr15 84126384 84126433 -19368541 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1226 780 316 33 5 chr15 84126433 84126568 -19368406 + B4A SINE B4 85 219 -73 2 1226 406 49 33 0 chr15 84126575 84126636 -19368338 + (CA)n Simple_repeat Simple_repeat 1 63 0 2 1226 813 234 89 65 chr15 84127502 84127853 -19367121 - MTC-int LTR MaLR -585 513 66 2 1226 1349 156 9 18 chr15 84127867 84128095 -19366879 - URR1A DNA MER1_type 0 226 1 2 1226 189 274 0 16 chr15 84131434 84131497 -19363477 - MIRb SINE MIR -187 81 20 2 1226 486 231 25 17 chr15 84135066 84135185 -19359789 + RSINE1 SINE B4 2 121 -44 2 1226 231 226 97 10 chr15 84135526 84135629 -19359345 - L1ME4a LINE L1 0 6124 6013 2 1226 294 50 0 0 chr15 84135711 84135751 -19359223 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1226 303 49 0 0 chr15 84135751 84135791 -19359183 + (GA)n Simple_repeat Simple_repeat 1 41 0 2 1226 240 35 0 0 chr15 84136150 84136179 -19358795 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 2 1226 546 238 0 0 chr15 84136207 84136312 -19358662 - B1F1 SINE Alu -43 106 2 2 1226 295 266 0 25 chr15 84136341 84136422 -19358552 + ID4 SINE ID 3 81 -2 2 1226 1246 97 31 46 chr15 84136719 84136914 -19358060 - B2_Mm1t SINE B2 0 193 2 2 1226 683 230 7 7 chr15 84137488 84137628 -19357346 + RSINE1 SINE B4 1 140 -25 2 1226 450 0 0 0 chr15 84137628 84137678 -19357296 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1226 1084 204 35 20 chr15 84137712 84137912 -19357062 + B3 SINE B2 1 203 -13 2 1226 21 0 0 0 chr15 84137976 84137997 -19356977 + AT_rich Low_complexity Low_complexity 1 21 0 2 1226 2492 52 62 0 chr15 84138046 84138351 -19356623 - ORR1A2 LTR MaLR 0 327 4 3 1226 543 246 130 0 chr15 84138549 84138687 -19356287 + B3 SINE B2 61 216 0 3 1226 488 90 0 25 chr15 84138879 84138959 -19356015 + (TCCCC)n Simple_repeat Simple_repeat 5 82 0 3 1226 254 159 32 0 chr15 84138986 84139049 -19355925 - Lx5 LINE L1 0 7050 6986 3 1226 684 280 62 17 chr15 84139816 84140056 -19354918 - MER2 DNA MER2_type 0 345 95 3 1226 214 402 0 0 chr15 84140109 84140201 -19354773 + (TG)n Simple_repeat Simple_repeat 1 92 0 3 1226 405 243 0 33 chr15 84140201 84140384 -19354590 + (TATG)n Simple_repeat Simple_repeat 2 178 0 3 1226 459 232 0 33 chr15 84140453 84140636 -19354338 + (TATG)n Simple_repeat Simple_repeat 3 179 0 3 1226 610 265 132 5 chr15 84141840 84142037 -19352937 + ID_B1 SINE B4 3 224 0 3 1226 203 32 65 0 chr15 84142115 84142146 -19352828 + (TGGGGG)n Simple_repeat Simple_repeat 3 35 0 3 1226 597 28 0 0 chr15 84142498 84142569 -19352405 + (CAGGG)n Simple_repeat Simple_repeat 3 73 0 3 1226 206 218 36 0 chr15 84142774 84142829 -19352145 + MIRc SINE MIR 84 140 -128 3 1226 243 88 0 0 chr15 84143733 84143767 -19351207 + (C)n Simple_repeat Simple_repeat 1 34 0 3 1226 288 0 0 0 chr15 84144377 84144409 -19350565 + (TCC)n Simple_repeat Simple_repeat 2 33 0 3 1226 390 160 67 0 chr15 84146588 84146663 -19348311 + B1F SINE Alu 62 141 -8 3 1226 230 286 29 0 chr15 84146735 84146805 -19348169 + B4A SINE B4 2 73 -219 3 1226 242 295 211 0 chr15 84147190 84147346 -19347628 + MER20 DNA MER1_type 31 219 0 3 1226 450 266 154 28 chr15 84147503 84147646 -19347328 + ID_B1 SINE B4 61 221 -3 3 1226 486 0 0 0 chr15 84147646 84147700 -19347274 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1226 288 0 0 0 chr15 84147700 84147731 -19347243 + (GA)n Simple_repeat Simple_repeat 1 32 0 3 1226 1665 208 97 0 chr15 84147731 84148102 -19346872 - MTD LTR MaLR 0 419 13 3 1227 368 353 73 65 chr15 84148981 84149351 -19345623 - MLT1A LTR MaLR 0 374 2 3 1227 1167 74 0 0 chr15 84150117 84150320 -19344654 + (TG)n Simple_repeat Simple_repeat 1 203 0 3 1227 385 311 6 74 chr15 84150795 84150958 -19344016 + MLT1H2 LTR MaLR 3 154 -335 3 1227 237 208 0 0 chr15 84152333 84152381 -19342593 + C-rich Low_complexity Low_complexity 1 48 0 3 1227 774 225 268 46 chr15 84152601 84152780 -19342194 - RMER1A Other Other -578 452 215 3 1227 1443 157 211 12 chr15 84152780 84152954 -19342020 - RMER17C LTR ERVK 0 410 180 3 1227 663 67 0 0 chr15 84152954 84153043 -19341931 + (GA)n Simple_repeat Simple_repeat 2 90 0 3 1227 1443 157 211 12 chr15 84153043 84153209 -19341765 - RMER17C LTR ERVK -231 179 2 3 1227 774 238 727 28 chr15 84153209 84153342 -19341632 - RMER1A Other Other -816 214 7 3 1227 363 44 0 0 chr15 84153595 84153640 -19341334 + (ATTTG)n Simple_repeat Simple_repeat 2 46 0 3 1227 869 219 114 0 chr15 84153788 84153989 -19340985 - ID_B1 SINE B4 0 224 1 3 1227 1218 43 0 0 chr15 84154207 84154347 -19340627 + B1_Mus2 SINE Alu 3 142 -5 3 1227 526 268 39 0 chr15 84154677 84154804 -19340170 + ID_B1 SINE B4 84 215 -9 3 1227 196 293 80 10 chr15 84155723 84155823 -19339151 - MIR3 SINE MIR -87 121 15 3 1227 603 254 243 24 chr15 84156904 84157207 -19337767 - MTEb LTR MaLR -10 369 1 3 1227 989 151 29 7 chr15 84157614 84158059 -19336915 + (TCCA)n Simple_repeat Simple_repeat 1 455 0 3 1227 217 296 118 18 chr15 84158207 84158317 -19336657 + MIR3 SINE MIR 85 205 -3 3 1227 360 294 70 0 chr15 84158941 84159084 -19335890 - MLT1-int LTR MaLR -1218 153 1 3 1227 1223 62 0 0 chr15 84160960 84161106 -19333868 + B1_Mus2 SINE Alu 2 147 0 3 1227 223 186 0 0 chr15 84161111 84161154 -19333820 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 3 1227 792 21 0 0 chr15 84161173 84161267 -19333707 + (CA)n Simple_repeat Simple_repeat 1 94 0 3 1227 288 53 0 0 chr15 84161267 84161305 -19333669 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 1227 621 238 0 0 chr15 84161908 84162072 -19332902 + (TG)n Simple_repeat Simple_repeat 2 165 0 3 1227 565 258 23 0 chr15 84162210 84162338 -19332636 + RSINE1 SINE B4 4 134 -31 3 1227 381 188 0 0 chr15 84162426 84162506 -19332468 + (CA)n Simple_repeat Simple_repeat 1 80 0 3 1227 317 307 22 33 chr15 84163473 84163655 -19331319 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 3 1227 246 329 0 0 chr15 84163602 84163684 -19331290 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 3 1227 256 262 7 7 chr15 84163694 84163836 -19331138 + (TGGA)n Simple_repeat Simple_repeat 4 145 0 3 1227 358 266 47 12 chr15 84164251 84164308 -19330666 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 3 1227 210 128 0 0 chr15 84164308 84164347 -19330627 + (TATG)n Simple_repeat Simple_repeat 2 40 0 3 1227 358 266 47 12 chr15 84164347 84164460 -19330514 + (TCCA)n Simple_repeat Simple_repeat 3 116 0 3 1227 1114 141 119 15 chr15 84165355 84165557 -19329417 - URR1A DNA MER1_type -3 223 1 3 1227 513 282 36 0 chr15 84166118 84166272 -19328702 - MIR SINE MIR -107 169 2 3 1227 274 308 102 8 chr15 84166380 84166498 -19328476 + MIRb SINE MIR 54 182 -94 3 1227 856 304 63 19 chr15 84167034 84167107 -19327867 + B4 SINE B4 8 96 -196 3 1227 812 245 30 0 chr15 84167107 84167307 -19327667 - B3 SINE B2 -10 206 1 3 1227 856 304 63 19 chr15 84167307 84167504 -19327470 + B4 SINE B4 97 289 -3 3 1227 303 93 0 0 chr15 84167507 84167550 -19327424 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1227 291 136 0 0 chr15 84167555 84167614 -19327360 + (GA)n Simple_repeat Simple_repeat 1 59 0 3 1227 249 266 25 12 chr15 84167739 84167819 -19327155 - MIRc SINE MIR -119 149 69 3 1227 393 289 79 25 chr15 84167994 84168196 -19326778 - ORR1D2 LTR MaLR -132 238 26 3 1227 212 184 0 39 chr15 84169489 84169540 -19325434 + G-rich Low_complexity Low_complexity 3 51 0 3 1227 663 145 98 15 chr15 84169750 84169883 -19325091 + RSINE1 SINE B4 3 146 -19 3 1227 417 54 0 0 chr15 84169894 84169950 -19325024 + (TAAA)n Simple_repeat Simple_repeat 1 56 0 3 1227 493 256 24 8 chr15 84170141 84170267 -19324707 + B1F1 SINE Alu 13 140 -9 3 1227 1690 237 77 12 chr15 84173588 84174079 -19320895 + RLTR11A2 LTR ERVK 5 527 0 3 1227 773 253 45 67 chr15 84174288 84174408 -19320566 - L1M4 LINE L1 -486 5693 5582 3 1227 1677 167 45 48 chr15 84174408 84174449 -19320525 - RMER10B LTR ERVL -3 395 352 3 1227 441 0 0 0 chr15 84174449 84174498 -19320476 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1227 1677 167 45 48 chr15 84174498 84174852 -19320122 - RMER10B LTR ERVL -47 351 2 3 1227 773 253 45 67 chr15 84174852 84175045 -19319929 - L1M4 LINE L1 -598 5581 5387 3 1227 369 321 51 41 chr15 84175046 84175241 -19319733 - MLT1A0 LTR MaLR -4 361 165 3 1227 356 59 20 0 chr15 84175257 84175308 -19319666 + (GA)n Simple_repeat Simple_repeat 2 53 0 3 1227 259 219 123 0 chr15 84175524 84175597 -19319377 - B2_Mm2 SINE B2 -113 82 1 3 1227 293 333 49 0 chr15 84175661 84175810 -19319164 - L1M4 LINE L1 -1145 5001 4844 3 1227 255 270 30 10 chr15 84176137 84176238 -19318736 + CT-rich Low_complexity Low_complexity 3 105 0 3 1227 349 178 80 53 chr15 84176261 84176374 -19318600 - Lx8 LINE L1 -1 7472 7357 3 1227 301 110 0 4 chr15 84177272 84177324 -19317650 - MT2A LTR ERVL 0 584 488 3 1227 266 215 0 12 chr15 84177338 84177418 -19317556 + (TA)n Simple_repeat Simple_repeat 2 80 0 3 1227 231 88 0 0 chr15 84177425 84177459 -19317515 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 1227 345 47 0 0 chr15 84177469 84177512 -19317462 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1227 1042 227 143 174 chr15 84177512 84177994 -19316980 - MT2A LTR ERVL -52 532 2 3 1227 388 257 9 9 chr15 84178002 84178116 -19316858 - ID_B1 SINE B4 -26 198 85 3 1227 233 304 0 80 chr15 84178181 84178281 -19316693 - B3 SINE B2 -40 176 85 3 1227 258 105 0 0 chr15 84178500 84178538 -19316436 + (TC)n Simple_repeat Simple_repeat 1 38 0 3 1227 482 215 0 0 chr15 84178538 84178631 -19316343 - B1_Mur2 SINE Alu -16 133 41 3 1227 389 330 0 0 chr15 84178748 84178843 -19316131 + B4 SINE B4 6 100 -192 3 1227 383 252 53 14 chr15 84178843 84179009 -19315965 - MLT1A1 LTR MaLR 0 505 202 3 1227 618 233 0 59 chr15 84179313 84179482 -19315492 - B3A SINE B2 0 198 40 3 1227 246 62 0 0 chr15 84179488 84179520 -19315454 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3 1227 277 320 4 83 chr15 84179663 84179905 -19315069 - L1MEc LINE L1 -4907 1493 1271 3 1227 243 266 20 39 chr15 84179944 84180045 -19314929 - ID4 SINE ID -47 105 6 3 1227 1017 120 0 0 chr15 84181171 84181313 -19313661 - B1_Mus1 SINE Alu -6 142 1 3 1227 477 269 25 0 chr15 84181318 84181437 -19313537 - B4 SINE B4 -86 206 85 3 1227 1815 203 78 5 chr15 84181459 84181841 -19313133 + MTD LTR MaLR 1 410 -9 3 1227 369 0 0 0 chr15 84182409 84182450 -19312524 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1227 205 346 12 36 chr15 84183637 84183721 -19311253 + MIRm SINE MIR 94 175 -101 3 1227 231 259 0 0 chr15 84183830 84183915 -19311059 + (CACCAT)n Simple_repeat Simple_repeat 1 85 0 3 1227 525 292 22 33 chr15 84183921 84184105 -19310869 + HAL1-2a_MD LINE L1 2326 2507 -517 3 1227 2099 145 3 3 chr15 84184306 84184644 -19310330 + ORR1A1 LTR MaLR 1 338 -8 3 1227 305 353 59 0 chr15 84184944 84185097 -19309877 + MIRc SINE MIR 2 163 -105 3 1227 678 13 0 0 chr15 84187199 84187278 -19307696 + (GGA)n Simple_repeat Simple_repeat 1 79 0 3 1227 239 278 59 40 chr15 84187829 84187930 -19307044 - BC1_Mm scRNA scRNA -34 118 16 3 1227 649 291 74 49 chr15 84188213 84188498 -19306476 + B4A SINE B4 1 292 0 3 1227 203 296 0 0 chr15 84188499 84188543 -19306431 + (CG)n Simple_repeat Simple_repeat 1 44 0 3 1227 713 171 7 0 chr15 84188543 84188689 -19306285 + (CA)n Simple_repeat Simple_repeat 1 147 0 4 1227 549 210 48 40 chr15 84188734 84188858 -19306116 + B1F1 SINE Alu 25 149 0 4 1227 354 236 74 19 chr15 84189453 84189561 -19305413 + PB1 SINE Alu 11 124 -3 4 1227 1406 201 75 6 chr15 84189630 84189950 -19305024 + MTD LTR MaLR 1 342 -77 4 1227 1128 128 0 0 chr15 84189964 84190143 -19304831 + (GGA)n Simple_repeat Simple_repeat 2 180 0 4 1227 261 0 0 0 chr15 84190143 84190172 -19304802 + (GAA)n Simple_repeat Simple_repeat 3 31 0 4 1227 234 215 29 58 chr15 84190172 84190241 -19304733 + MTD LTR MaLR 339 405 -14 4 1227 210 288 61 0 chr15 84190224 84190290 -19304684 + ID4_ SINE ID 14 83 0 4 1227 544 200 387 0 chr15 84190476 84190631 -19304343 + B3 SINE B2 1 215 -1 4 1227 567 175 0 0 chr15 84191735 84191832 -19303142 + B1_Mus2 SINE Alu 42 138 -9 4 1227 2523 71 3 0 chr15 84192115 84192441 -19302533 + ORR1A2 LTR MaLR 1 327 0 4 1227 1245 96 0 0 chr15 84192878 84193056 -19301918 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 4 1227 999 86 0 0 chr15 84193056 84193195 -19301779 + (TTC)n Simple_repeat Simple_repeat 2 140 0 4 1227 198 254 55 0 chr15 84193679 84193734 -19301240 + L2a LINE L2 3011 3068 -358 4 1227 1770 117 38 76 chr15 84193738 84193899 -19301075 + ORR1A4 LTR MaLR 1 152 -177 4 1227 3164 55 8 0 chr15 84193899 84194296 -19300678 + MTB LTR MaLR 1 400 0 4 1227 1770 117 38 76 chr15 84194296 84194476 -19300498 + ORR1A4 LTR MaLR 153 329 0 4 1227 522 162 44 0 chr15 84194705 84194841 -19300133 + (TGGA)n Simple_repeat Simple_repeat 3 144 0 4 1227 244 344 16 8 chr15 84194955 84195081 -19299893 + MIR3 SINE MIR 82 208 0 4 1227 338 276 102 65 chr15 84195265 84195451 -19299523 + MLT1G3 LTR MaLR 218 410 -185 4 1227 340 304 323 30 chr15 84195581 84195834 -19299140 - MLT1A1 LTR MaLR -57 351 25 4 1227 1226 249 126 48 chr15 84196432 84196916 -19298058 + Lx8 LINE L1 6950 7471 -2 4 1227 692 353 51 25 chr15 84197043 84197438 -19297536 + MER63D DNA AcHobo 267 671 -390 4 1227 414 0 0 0 chr15 84197479 84197525 -19297449 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1227 247 200 0 48 chr15 84197691 84197754 -19297220 - B1_Mus1 SINE Alu -58 90 31 4 1227 579 191 202 0 chr15 84198336 84198504 -19296470 - ORR1D1 LTR MaLR 0 374 173 4 1227 273 89 0 0 chr15 84198504 84198549 -19296425 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 4 1227 273 235 24 0 chr15 84198554 84198639 -19296335 + (CAGA)n Simple_repeat Simple_repeat 4 90 0 4 1227 420 152 0 0 chr15 84198640 84198739 -19296235 + GA-rich Low_complexity Low_complexity 2 100 0 4 1227 888 148 28 28 chr15 84198741 84198922 -19296052 - ORR1D1 LTR MaLR -193 181 1 4 1227 368 209 231 0 chr15 84199073 84199164 -19295810 - ORR1E-int LTR MaLR -1256 324 213 4 1227 465 185 29 40 chr15 84199165 84199313 -19295661 - RMER1C Other Other 0 1342 1246 4 1227 421 70 42 0 chr15 84199316 84199363 -19295611 + (GGAA)n Simple_repeat Simple_repeat 2 50 0 4 1227 1374 17 0 33 chr15 84199363 84199547 -19295427 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 4 1227 421 70 42 0 chr15 84199547 84199570 -19295404 + (GGAA)n Simple_repeat Simple_repeat 3 25 0 4 1227 1044 156 28 0 chr15 84199570 84199749 -19295225 - RMER1C Other Other -117 1225 1042 4 1227 523 54 27 0 chr15 84199767 84199841 -19295133 - B1_Mm SINE Alu 0 147 72 4 1227 7864 54 2 4 chr15 84199847 84200875 -19294099 - L1Md_F2 LINE L1 0 6582 5586 4 1227 402 228 8 58 chr15 84200877 84200998 -19293976 - ID_B1 SINE B4 -32 192 78 4 1227 570 100 0 0 chr15 84200911 84200991 -19293983 - B1_Mus2 SINE Alu -65 82 3 4 1227 409 200 0 104 chr15 84200991 84201017 -19293957 - MT2B LTR ERVL -362 239 145 4 1227 428 20 0 0 chr15 84201030 84201079 -19293895 + L1Md_F2 LINE L1 5537 5585 -298 4 1227 7553 51 8 6 chr15 84201080 84202070 -19292904 + L1Md_F2 LINE L1 5587 6578 -4 4 1227 730 224 149 50 chr15 84202085 84202306 -19292668 - RMER1C Other Other -318 1024 782 4 1227 721 253 77 0 chr15 84202309 84202503 -19292471 - ORR1E-int LTR MaLR -1370 210 2 4 1227 564 286 118 82 chr15 84202516 84202847 -19292127 - ORR1E LTR MaLR -9 350 8 4 1227 342 150 0 0 chr15 84202884 84202944 -19292030 - Lx5 LINE L1 -441 6609 6550 4 1227 1735 170 158 3 chr15 84202945 84203305 -19291669 + Lx5 LINE L1 6633 7048 -2 4 1227 415 335 69 69 chr15 84203370 84203630 -19291344 - MLT1A1 LTR MaLR -93 315 56 4 1227 212 297 0 30 chr15 84203993 84204059 -19290915 + C-rich Low_complexity Low_complexity 5 68 0 4 1227 480 180 10 2 chr15 84204406 84204506 -19290468 - B1F2 SINE Alu -2 118 15 4 1227 315 182 23 105 chr15 84204435 84204521 -19290453 - MT2B LTR ERVL -361 240 162 4 1227 868 306 63 34 chr15 84204522 84204935 -19290039 - L1MD1 LINE L1 -196 6046 5622 4 1227 1196 124 11 5 chr15 84204966 84205153 -19289821 - B2_Mm2 SINE B2 -7 188 1 4 1227 419 229 68 126 chr15 84205162 84205203 -19289771 - B2_Mm2 SINE B2 -9 186 153 4 1227 279 0 0 0 chr15 84205203 84205234 -19289740 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1227 616 229 68 126 chr15 84205234 84205382 -19289592 - B3A SINE B2 -39 159 8 4 1227 1023 240 45 77 chr15 84205547 84205859 -19289115 - MTD LTR MaLR -72 347 46 4 1227 767 322 80 21 chr15 84205908 84206282 -19288692 + L1M4 LINE L1 4475 4870 -1276 4 1227 330 323 141 6 chr15 84206294 84206450 -19288524 + L1M4 LINE L1 4925 5101 -1045 4 1227 812 283 9 9 chr15 84206550 84206771 -19288203 - ID_B1 SINE B4 -3 221 1 4 1227 461 259 23 0 chr15 84206797 84206928 -19288046 - L1MD1 LINE L1 -854 5292 5159 4 1227 423 299 62 88 chr15 84206932 84207284 -19287690 - L1MD1 LINE L1 -1581 4565 4223 4 1227 30 0 0 0 chr15 84207378 84207408 -19287566 + AT_rich Low_complexity Low_complexity 1 30 0 4 1227 441 281 69 39 chr15 84207469 84207864 -19287110 - L1MC1 LINE L1 -149 6184 5718 4 1227 1983 112 16 13 chr15 84207870 84208188 -19286786 + ORR1A2 LTR MaLR 1 319 -8 4 1227 353 189 0 11 chr15 84211389 84211480 -19283494 + (TG)n Simple_repeat Simple_repeat 1 90 0 4 1227 303 315 198 0 chr15 84215586 84215697 -19279277 + RSINE1 SINE B4 1 133 -32 4 1227 180 0 0 0 chr15 84215705 84215725 -19279249 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 1227 299 336 36 0 chr15 84215918 84216028 -19278946 + L2a LINE L2 3313 3426 0 4 1227 329 361 14 99 chr15 84216484 84216776 -19278198 + L1MC4 LINE L1 2010 2276 -3939 4 1227 504 0 0 0 chr15 84216992 84217048 -19277926 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 1227 243 146 42 0 chr15 84217215 84217263 -19277711 + PB1D10 SINE Alu 67 116 -1 4 1227 1327 227 11 7 chr15 84217278 84217553 -19277421 + B4A SINE B4 15 290 -2 4 1227 1300 96 5 16 chr15 84217669 84217859 -19277115 + B2_Mm2 SINE B2 1 188 -7 4 1227 263 275 26 0 chr15 84217929 84218026 -19276948 + L1MC4 LINE L1 3010 3108 -3106 4 1227 1200 258 125 11 chr15 84218561 84218922 -19276052 - MTD LTR MaLR 0 419 18 4 1227 367 246 158 138 chr15 84219359 84219599 -19275375 - MTEa LTR MaLR -25 354 93 4 1227 1048 293 91 0 chr15 84219786 84220127 -19274847 + MTEa LTR MaLR 1 372 -7 4 1227 393 22 0 0 chr15 84220525 84220571 -19274403 + (CCAA)n Simple_repeat Simple_repeat 2 47 0 4 1227 342 0 0 0 chr15 84221401 84221439 -19273535 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 1227 1995 232 149 20 chr15 84221439 84221997 -19272977 - Lx6 LINE L1 -59 7401 6772 4 1227 420 179 10 40 chr15 84221998 84222097 -19272877 - B4A SINE B4 -196 96 1 4 1227 211 247 86 43 chr15 84222321 84222414 -19272560 + L2c LINE L2 3075 3171 -216 4 1227 197 222 0 82 chr15 84222496 84222545 -19272429 + MIRm SINE MIR 86 130 -146 4 1227 222 296 162 11 chr15 84223248 84223391 -19271583 - MIRm SINE MIR -93 183 2 4 1227 184 260 110 0 chr15 84223710 84223783 -19271191 - MIR SINE MIR -79 183 103 4 1227 757 250 71 0 chr15 84224190 84224374 -19270600 + B3 SINE B2 20 216 0 4 1227 495 0 0 0 chr15 84225042 84225097 -19269877 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1227 218 300 0 0 chr15 84225538 84225608 -19269366 + ID SINE ID 2 71 -153 4 1227 255 233 67 0 chr15 84225623 84225683 -19269291 + PB1D10 SINE Alu 49 112 -5 4 1227 1089 241 242 9 chr15 84226738 84227073 -19267901 + MTD LTR MaLR 7 419 0 4 1227 739 157 10 0 chr15 84227247 84227575 -19267399 + (CA)n Simple_repeat Simple_repeat 1 331 0 4 1227 769 144 11 0 chr15 84227625 84227799 -19267175 + (CA)n Simple_repeat Simple_repeat 2 177 0 4 1227 208 350 16 33 chr15 84229684 84229787 -19265187 + L2b LINE L2 3287 3424 -2 4 1227 227 363 62 85 chr15 84230297 84230498 -19264476 - MER63D DNA AcHobo -754 307 108 4 1227 288 0 0 0 chr15 84230498 84230530 -19264444 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1227 244 352 41 30 chr15 84231460 84231613 -19263361 - MIRb SINE MIR -74 194 45 4 1227 405 0 0 0 chr15 84231663 84231708 -19263266 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1227 221 261 11 0 chr15 84231877 84231965 -19263009 + (TAGG)n Simple_repeat Simple_repeat 4 92 0 4 1227 182 150 25 0 chr15 84232679 84232719 -19262255 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 4 1227 261 354 30 37 chr15 84232994 84233129 -19261845 - L2 LINE L2 -592 2827 2694 4 1227 295 317 59 10 chr15 84233157 84233259 -19261715 + MIR SINE MIR 33 139 -123 4 1227 225 294 110 0 chr15 84233400 84233509 -19261465 + RMER15 LTR ERVL 275 395 -180 4 1227 214 216 0 0 chr15 84233544 84233581 -19261393 + MIRc SINE MIR 117 153 -115 4 1227 239 293 0 51 chr15 84235259 84235338 -19259636 + L2b LINE L2 3292 3366 -9 4 1227 228 287 37 56 chr15 84236585 84236692 -19258282 + L4 LINE RTE 1713 1817 -212 4 1227 860 251 71 14 chr15 84237776 84237986 -19256988 - ID_B1 SINE B4 0 224 3 4 1227 219 122 0 33 chr15 84240070 84240121 -19254853 - MIRc SINE MIR -110 166 118 4 1227 950 243 47 0 chr15 84241253 84241285 -19253689 + ID SINE ID 1 35 -189 4 1227 186 0 28 56 chr15 84241285 84241321 -19253653 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1227 950 243 47 0 chr15 84241321 84241502 -19253472 + ID_B1 SINE B4 36 223 -1 4 1227 223 233 0 0 chr15 84241542 84241585 -19253389 + B4A SINE B4 77 119 -173 4 1227 214 256 0 0 chr15 84241580 84241623 -19253351 + B4A SINE B4 77 119 -173 4 1227 223 233 0 0 chr15 84241618 84241661 -19253313 + B4A SINE B4 77 119 -173 4 1227 223 233 0 0 chr15 84241656 84241699 -19253275 + B4A SINE B4 77 119 -173 5 1227 223 233 0 0 chr15 84241694 84241737 -19253237 + B4A SINE B4 77 119 -173 5 1227 650 187 0 9 chr15 84241741 84241854 -19253120 + PB1D10 SINE Alu 1 112 -5 5 1227 478 152 0 16 chr15 84242271 84242398 -19252576 + GA-rich Low_complexity Low_complexity 1 125 0 5 1227 192 167 0 0 chr15 84242414 84242462 -19252512 + GA-rich Low_complexity Low_complexity 2 49 0 5 1227 324 219 0 0 chr15 84242478 84242606 -19252368 + GA-rich Low_complexity Low_complexity 2 129 0 5 1227 252 143 0 0 chr15 84242622 84242678 -19252296 + (GA)n Simple_repeat Simple_repeat 2 57 0 5 1227 225 174 0 0 chr15 84242694 84242740 -19252234 + GA-rich Low_complexity Low_complexity 2 47 0 5 1227 378 0 0 0 chr15 84245283 84245325 -19249649 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 5 1227 618 161 0 9 chr15 84245354 84245467 -19249507 + B1_Mur4 SINE Alu 38 149 -1 5 1227 238 100 50 0 chr15 84245847 84245887 -19249087 + ID2 SINE ID 2 43 -40 5 1227 1277 251 28 66 chr15 84246333 84246696 -19248278 + ORR1E LTR MaLR 9 357 -2 5 1227 235 312 46 51 chr15 84247249 84247381 -19247593 - MIRb SINE MIR -21 241 109 5 1227 250 321 102 44 chr15 84248050 84248187 -19246787 - MIRb SINE MIR -72 196 52 5 1227 234 0 0 0 chr15 84248194 84248220 -19246754 + (TC)n Simple_repeat Simple_repeat 2 27 0 5 1227 21 0 0 0 chr15 84250408 84250429 -19244545 + GC_rich Low_complexity Low_complexity 1 21 0 5 1227 379 299 71 0 chr15 84251175 84251329 -19243645 + L1MB3 LINE L1 5664 5828 -355 5 1227 430 190 0 0 chr15 84251329 84251408 -19243566 + ID4 SINE ID 2 80 -3 5 1227 222 323 114 41 chr15 84253677 84253849 -19241125 - MIRb SINE MIR -48 220 35 5 1227 3609 204 91 20 chr15 84255030 84255925 -19239049 + RMER17B LTR ERVK 1 958 0 5 1227 650 74 21 0 chr15 84257262 84257357 -19237617 - B1_Mur4 SINE Alu -13 137 41 5 1227 657 224 25 0 chr15 84257357 84257518 -19237456 + (CCTG)n Simple_repeat Simple_repeat 2 166 0 5 1227 291 137 0 19 chr15 84257526 84257578 -19237396 - B1_Mus1 SINE Alu -93 55 5 5 1227 247 315 0 53 chr15 84257578 84257615 -19237359 - B4A SINE B4 -149 138 55 5 1227 276 77 0 0 chr15 84259072 84259111 -19235863 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 5 1227 226 263 0 0 chr15 84259662 84259719 -19235255 + C-rich Low_complexity Low_complexity 1 57 0 5 1227 184 300 99 10 chr15 84259739 84259840 -19235134 - MIR SINE MIR -78 130 21 5 1227 230 261 14 0 chr15 84260701 84260770 -19234204 - MIR SINE MIR -130 132 63 5 1227 471 35 0 0 chr15 84261260 84261317 -19233657 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 1227 370 287 56 0 chr15 84261365 84261473 -19233501 + MIRc SINE MIR 11 124 -144 5 1227 855 277 41 55 chr15 84262278 84262568 -19232406 + B4A SINE B4 6 291 -1 5 1227 435 83 0 0 chr15 84262573 84262633 -19232341 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 1227 207 256 195 0 chr15 84263388 84263470 -19231504 + MIRb SINE MIR 80 177 -91 5 1227 960 219 36 0 chr15 84265537 84265733 -19229241 + MTD LTR MaLR 8 210 -209 5 1227 1266 82 0 11 chr15 84265731 84265917 -19229057 + B2_Mm2 SINE B2 12 195 0 5 1227 782 213 30 50 chr15 84265911 84266049 -19228925 + MTD LTR MaLR 196 338 -81 5 1227 609 27 0 0 chr15 84266049 84266124 -19228850 + (CA)n Simple_repeat Simple_repeat 1 75 0 5 1227 782 213 30 50 chr15 84266124 84266183 -19228791 + MTD LTR MaLR 339 389 -30 5 1227 1175 82 0 0 chr15 84266243 84266390 -19228584 - B1_Mus2 SINE Alu 0 147 1 5 1227 323 295 48 24 chr15 84267433 84267558 -19227416 - MIR SINE MIR -63 145 18 5 1227 234 132 0 0 chr15 84269070 84269108 -19225866 + MER117 DNA MER1_type 123 160 -37 5 1227 210 252 53 11 chr15 84269789 84269890 -19225084 - MIR SINE MIR -125 151 47 5 1227 185 94 31 0 chr15 84270591 84270623 -19224351 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 5 1227 299 264 57 113 chr15 84271295 84271436 -19223538 - MIRc SINE MIR -120 148 16 5 1227 194 0 39 0 chr15 84275097 84275123 -19219851 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 5 1227 701 243 0 7 chr15 84275133 84275282 -19219692 + B1F SINE Alu 2 149 0 5 1227 312 228 50 25 chr15 84275844 84275944 -19219030 - MIR SINE MIR -81 195 81 5 1227 189 132 0 0 chr15 84276348 84276386 -19218588 + (TAA)n Simple_repeat Simple_repeat 2 39 0 5 1227 22 88 0 0 chr15 84276831 84276888 -19218086 + GC_rich Low_complexity Low_complexity 1 57 0 5 1227 21 100 0 0 chr15 84276907 84276977 -19217997 + GC_rich Low_complexity Low_complexity 1 70 0 5 1227 592 13 26 0 chr15 84277029 84277106 -19217868 + (TC)n Simple_repeat Simple_repeat 2 80 0 5 1227 370 348 6 22 chr15 84277138 84277320 -19217654 + CT-rich Low_complexity Low_complexity 2 180 0 5 1227 228 35 0 0 chr15 84277326 84277355 -19217619 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 5 1227 254 299 0 65 chr15 84278080 84278173 -19216801 - MIRc SINE MIR -144 124 38 5 1227 392 0 21 0 chr15 84278578 84278626 -19216348 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1227 206 203 71 31 chr15 84279033 84279160 -19215814 + (TG)n Simple_repeat Simple_repeat 1 132 0 5 1228 624 172 0 0 chr15 84280253 84280369 -19214605 + CT-rich Low_complexity Low_complexity 2 117 0 5 1228 795 269 76 9 chr15 84280369 84280579 -19214395 - ID_B1 SINE B4 0 224 1 5 1228 815 198 6 74 chr15 84280624 84280799 -19214175 - RSINE1 SINE B4 0 165 3 5 1228 1551 218 50 6 chr15 84286343 84286684 -19208290 - MTEb LTR MaLR -11 368 13 5 1228 4289 263 159 10 chr15 84286697 84288072 -19206902 - MTEb-int LTR MaLR 0 1580 1 5 1228 1016 225 80 57 chr15 84288086 84288297 -19206677 - MTEb LTR MaLR -12 367 171 5 1228 297 0 0 0 chr15 84288297 84288330 -19206644 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 5 1228 1016 225 80 57 chr15 84288330 84288467 -19206507 - MTEb LTR MaLR -209 170 13 5 1228 213 39 0 0 chr15 84288470 84288496 -19206478 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 5 1228 967 93 59 7 chr15 84288505 84288657 -19206317 - B2_Mm2 SINE B2 -34 161 2 5 1228 180 0 0 0 chr15 84289769 84289789 -19205185 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1228 342 0 0 0 chr15 84290313 84290351 -19204623 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1228 293 245 0 10 chr15 84290358 84290461 -19204513 + (TGGA)n Simple_repeat Simple_repeat 3 104 0 5 1228 914 151 5 5 chr15 84290474 84290701 -19204273 + (TGGA)n Simple_repeat Simple_repeat 1 227 0 5 1228 1183 178 47 41 chr15 84290706 84290982 -19203992 + RMER19B LTR ERVK 1 240 -662 5 1228 388 0 39 0 chr15 84290982 84291034 -19203940 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 5 1228 1183 190 50 7 chr15 84291034 84291083 -19203891 + RMER19B LTR ERVK 241 279 -623 5 1228 284 254 15 0 chr15 84291277 84291344 -19203630 - ID4 SINE ID -13 70 3 5 1228 351 289 28 43 chr15 84291354 84291495 -19203479 - B1F SINE Alu -2 147 9 5 1228 191 227 90 15 chr15 84292424 84292491 -19202483 + MIR SINE MIR 81 152 -56 5 1228 5719 120 7 14 chr15 84293073 84293962 -19201012 + RMER19B LTR ERVK 1 885 -17 5 1228 1210 61 0 0 chr15 84293962 84294110 -19200864 + B1_Mus1 SINE Alu 1 148 0 5 1228 2052 108 170 0 chr15 84295588 84295911 -19199063 + RLTR14 LTR ERV1 5 382 0 5 1228 266 285 56 84 chr15 84298015 84298157 -19196817 + MLT1A1 LTR MaLR 271 408 0 5 1228 246 204 0 0 chr15 84298306 84298355 -19196619 + ID_B1 SINE B4 129 177 -47 5 1228 239 143 35 35 chr15 84298322 84298380 -19196594 + RLTR25B LTR ERVK 467 524 -504 5 1228 265 319 14 0 chr15 84301056 84301128 -19193846 + ID4_ SINE ID 8 80 -3 5 1228 306 0 0 0 chr15 84301349 84301383 -19193591 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 1228 333 0 0 0 chr15 84301383 84301419 -19193555 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1228 5529 120 60 35 chr15 84303739 84304618 -19190356 + RMER19B LTR ERVK 2 902 0 5 1228 566 233 6 0 chr15 84305135 84305294 -19189680 + (CA)n Simple_repeat Simple_repeat 1 160 0 5 1228 221 247 0 12 chr15 84305345 84305427 -19189547 + (CATATA)n Simple_repeat Simple_repeat 6 86 0 5 1228 201 318 110 19 chr15 84305601 84305755 -19189219 - L2b LINE L2 -248 3127 2960 5 1228 929 320 45 39 chr15 84306245 84306651 -19188323 - MTD LTR MaLR -16 403 18 5 1228 347 324 26 26 chr15 84306704 84306856 -19188118 + MLT1C LTR MaLR 290 441 -26 5 1228 945 211 58 14 chr15 84307217 84307424 -19187550 + B3 SINE B2 1 216 0 5 1228 304 64 71 77 chr15 84307801 84307971 -19187003 + (GGATG)n Simple_repeat Simple_repeat 1 169 0 5 1228 235 202 68 39 chr15 84307971 84308074 -19186900 + (ATGGTG)n Simple_repeat Simple_repeat 3 108 0 5 1228 327 33 77 89 chr15 84308075 84308243 -19186731 + (GGATG)n Simple_repeat Simple_repeat 4 169 0 5 1228 358 45 58 94 chr15 84308311 84308470 -19186504 + (GGATG)n Simple_repeat Simple_repeat 5 159 0 5 1228 3137 64 18 0 chr15 84308470 84308863 -19186111 + MTB LTR MaLR 1 400 0 5 1228 204 201 40 29 chr15 84308863 84309017 -19185957 + (ATGGTG)n Simple_repeat Simple_repeat 4 158 0 5 1228 228 216 0 0 chr15 84309921 84309972 -19185002 + CT-rich Low_complexity Low_complexity 1 51 0 5 1228 393 379 61 43 chr15 84309972 84310300 -19184674 + L1M5 LINE L1 4353 4686 -1460 5 1228 1130 112 6 0 chr15 84310856 84311034 -19183940 + (GAA)n Simple_repeat Simple_repeat 1 179 0 5 1228 432 0 0 0 chr15 84312998 84313046 -19181928 + (TC)n Simple_repeat Simple_repeat 2 49 0 5 1228 333 368 78 10 chr15 84314259 84314465 -19180509 + MLT1E3 LTR MaLR 267 486 -138 5 1228 229 361 14 0 chr15 84314541 84314613 -19180361 - ID4 SINE ID -7 76 4 5 1228 209 203 0 24 chr15 84316233 84316290 -19178684 - MIRc SINE MIR -139 129 72 5 1228 2133 93 20 72 chr15 84316325 84316672 -19178302 + ORR1A4 LTR MaLR 1 329 0 5 1228 978 165 84 5 chr15 84316711 84316924 -19178050 + RMER4B LTR ERVK 17 246 -339 5 1228 214 68 22 43 chr15 84316945 84316991 -19177983 + (CTG)n Simple_repeat Simple_repeat 1 45 0 5 1228 591 171 234 0 chr15 84317001 84317159 -19177815 + MTD LTR MaLR 225 419 0 5 1228 256 394 0 47 chr15 84318297 84318425 -19176549 - MIRb SINE MIR -92 176 55 6 1228 510 17 0 0 chr15 84318533 84318592 -19176382 + (CAGCC)n Simple_repeat Simple_repeat 2 60 0 6 1228 186 237 74 62 chr15 84318881 84318909 -19176065 - L2b LINE L2 -29 3346 3318 6 1228 3459 39 100 96 chr15 84318909 84319419 -19175555 - RLTR1B LTR ERV1 0 512 1 6 1228 186 237 74 62 chr15 84319419 84319471 -19175503 - L2b LINE L2 -58 3317 3265 6 1228 233 169 38 25 chr15 84321666 84321745 -19173229 + (CATA)n Simple_repeat Simple_repeat 1 80 0 6 1228 612 198 325 0 chr15 84323515 84323672 -19171302 - ID_B1 SINE B4 -10 214 7 6 1228 181 289 144 0 chr15 84324030 84324127 -19170847 - MIRc SINE MIR -120 148 38 6 1228 1191 224 99 23 chr15 84324902 84325204 -19169770 - MTE2b LTR MaLR -54 325 1 6 1228 201 132 0 0 chr15 84325382 84325420 -19169554 + (CAGAGA)n Simple_repeat Simple_repeat 5 42 0 6 1228 413 291 0 0 chr15 84326757 84326860 -19168114 + B1F SINE Alu 42 144 -5 6 1228 24 0 0 0 chr15 84326954 84326978 -19167996 + GC_rich Low_complexity Low_complexity 1 24 0 6 1228 190 333 14 0 chr15 84327030 84327099 -19167875 - MIRb SINE MIR -112 156 87 6 1228 250 225 84 0 chr15 84330916 84330987 -19163987 + MIR3 SINE MIR 97 173 -35 6 1228 522 131 0 35 chr15 84332138 84332225 -19162749 - B1_Mus2 SINE Alu 0 147 64 6 1228 200 182 0 0 chr15 84332226 84332259 -19162715 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 1228 474 61 0 0 chr15 84332281 84332347 -19162627 + (GA)n Simple_repeat Simple_repeat 2 67 0 6 1228 1211 184 14 19 chr15 84332350 84332566 -19162408 - B3 SINE B2 0 216 2 6 1228 498 108 0 0 chr15 84332740 84332814 -19162160 + (TCC)n Simple_repeat Simple_repeat 3 76 0 6 1228 527 241 241 0 chr15 84332903 84333077 -19161897 - B3 SINE B2 0 216 1 6 1228 854 108 0 39 chr15 84333124 84333359 -19161615 + (TG)n Simple_repeat Simple_repeat 1 225 0 6 1228 297 0 0 0 chr15 84333498 84333531 -19161443 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 1228 252 0 0 0 chr15 84333540 84333568 -19161406 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 6 1228 249 289 173 47 chr15 84333616 84333743 -19161231 - B4 SINE B4 -6 286 144 6 1228 562 338 103 51 chr15 84333909 84334493 -19160481 - L1MC3 LINE L1 -136 7649 7036 6 1228 251 332 206 0 chr15 84334650 84334849 -19160125 - L1MC3 LINE L1 -1000 6882 6643 6 1228 1021 266 73 29 chr15 84334885 84335160 -19159814 - B4A SINE B4 0 292 6 6 1228 955 327 88 16 chr15 84335186 84335684 -19159290 - L1MC3 LINE L1 -1714 6071 5538 6 1228 385 287 190 6 chr15 84335973 84336131 -19158843 - L1MEf LINE L1 -5150 1050 864 6 1228 486 248 148 54 chr15 84336147 84336296 -19158678 + RSINE1 SINE B4 3 165 0 6 1228 189 0 0 0 chr15 84336461 84336482 -19158492 + (CCCCCA)n Simple_repeat Simple_repeat 3 23 0 6 1228 532 285 19 25 chr15 84336998 84337160 -19157814 + RSINE1 SINE B4 3 163 -2 6 1228 187 310 0 17 chr15 84337748 84337807 -19157167 - L4 LINE RTE -280 1749 1692 6 1228 204 40 0 0 chr15 84338169 84338194 -19156780 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1228 1242 54 0 0 chr15 84338194 84338342 -19156632 - B1_Mus1 SINE Alu 0 148 1 6 1228 261 345 49 67 chr15 84339568 84339792 -19155182 + MLT1C LTR MaLR 45 264 -203 6 1228 210 71 0 0 chr15 84340362 84340390 -19154584 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1228 495 0 0 0 chr15 84341008 84341063 -19153911 + (TCC)n Simple_repeat Simple_repeat 1 55 0 6 1228 284 0 28 0 chr15 84341144 84341180 -19153794 + (CAA)n Simple_repeat Simple_repeat 2 38 0 6 1228 340 313 0 43 chr15 84341296 84341436 -19153538 + C-rich Low_complexity Low_complexity 2 135 0 6 1228 386 178 27 14 chr15 84341604 84341678 -19153296 - B4 SINE B4 -205 87 13 6 1228 839 176 1 30 chr15 84341682 84341887 -19153087 - B3 SINE B2 -9 186 1 6 1228 453 278 12 167 chr15 84342151 84342402 -19152572 - ID_B1 SINE B4 -3 221 15 6 1228 243 247 24 47 chr15 84344145 84344230 -19150744 - MTE2a LTR MaLR -124 255 173 6 1228 1804 164 68 38 chr15 84344260 84344315 -19150659 - MTD LTR MaLR -8 411 359 6 1228 1822 160 175 11 chr15 84344315 84344675 -19150299 + MTD LTR MaLR 1 419 0 6 1228 1804 164 68 38 chr15 84344675 84344852 -19150122 - MTD LTR MaLR -61 358 179 6 1228 1278 198 55 79 chr15 84344852 84344872 -19150102 - RMER17C LTR ERVK -3 407 388 6 1228 1111 106 0 22 chr15 84344872 84345056 -19149918 + (GGA)n Simple_repeat Simple_repeat 1 180 0 6 1228 1278 198 55 79 chr15 84345056 84345071 -19149903 - RMER17C LTR ERVK -23 387 377 6 1228 957 85 19 7 chr15 84345071 84345225 -19149749 + (GGGAGA)n Simple_repeat Simple_repeat 1 156 0 6 1228 1278 198 55 79 chr15 84345225 84345403 -19149571 - RMER17C LTR ERVK -34 376 190 6 1228 892 105 14 0 chr15 84345403 84345546 -19149428 + (GAA)n Simple_repeat Simple_repeat 1 145 0 6 1228 1278 198 55 79 chr15 84345546 84345747 -19149227 - RMER17C LTR ERVK -221 189 2 6 1228 1804 164 68 38 chr15 84345747 84345799 -19149175 - MTD LTR MaLR -241 178 117 6 1228 758 58 42 0 chr15 84345799 84345919 -19149055 + (AGGGGG)n Simple_repeat Simple_repeat 4 128 0 6 1228 1804 164 68 38 chr15 84345919 84346031 -19148943 - MTD LTR MaLR -303 116 2 6 1228 518 283 7 28 chr15 84346031 84346149 -19148825 - MTE2a LTR MaLR -208 171 57 6 1228 219 146 0 0 chr15 84347005 84347046 -19147928 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1228 396 275 5 63 chr15 84347401 84347633 -19147341 + GA-rich Low_complexity Low_complexity 1 218 0 6 1228 182 220 0 17 chr15 84347653 84347713 -19147261 + GA-rich Low_complexity Low_complexity 3 61 0 6 1228 489 140 39 39 chr15 84348251 84348429 -19146545 + (CA)n Simple_repeat Simple_repeat 2 179 0 6 1228 583 112 62 6 chr15 84348491 84348653 -19146321 + (CA)n Simple_repeat Simple_repeat 1 171 0 6 1228 252 156 22 0 chr15 84349529 84349574 -19145400 - L2c LINE L2 -231 3156 3111 6 1228 342 0 0 0 chr15 84350659 84350697 -19144277 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1228 358 359 38 24 chr15 84350934 84351145 -19143829 + L1MEd LINE L1 715 928 -5191 6 1228 231 274 0 0 chr15 84351167 84351218 -19143756 + L1M5 LINE L1 5547 5597 -643 6 1228 413 243 89 6 chr15 84351284 84351401 -19143573 - PB1D10 SINE Alu -25 123 2 6 1228 191 253 0 12 chr15 84351477 84351557 -19143417 + GA-rich Low_complexity Low_complexity 3 81 0 6 1228 1509 73 5 0 chr15 84351580 84351772 -19143202 - B2_Mm2 SINE B2 -1 194 2 6 1228 193 333 71 0 chr15 84352293 84352392 -19142582 + MIR SINE MIR 79 184 -78 6 1228 201 393 69 6 chr15 84354111 84354285 -19140689 - MIRb SINE MIR -27 241 57 6 1228 488 283 0 9 chr15 84354326 84354440 -19140534 - PB1D10 SINE Alu 0 117 5 6 1228 249 246 31 0 chr15 84356246 84356311 -19138663 + MLT1K LTR MaLR 522 588 -7 6 1228 507 179 206 24 chr15 84357921 84358047 -19136927 - B1_Mur1 SINE Alu 0 149 1 6 1228 288 336 57 7 chr15 84358410 84358551 -19136423 + Tigger5 DNA MER2_type 1 148 -2258 6 1228 321 26 0 0 chr15 84358704 84358742 -19136232 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1228 236 280 80 0 chr15 84359126 84359201 -19135773 + L2a LINE L2 3322 3402 -24 6 1228 1223 121 25 35 chr15 84359218 84359415 -19135559 - B2_Mm2 SINE B2 0 195 1 6 1228 1279 295 144 10 chr15 84359590 84359897 -19135077 - MTE-int LTR MaLR -29 1551 1191 6 1228 186 43 0 0 chr15 84359897 84359920 -19135054 + (ATGGTG)n Simple_repeat Simple_repeat 1 23 0 6 1228 1279 295 144 10 chr15 84359920 84360125 -19134849 - MTE-int LTR MaLR -390 1190 971 6 1228 245 286 26 13 chr15 84360573 84360651 -19134323 - MLT1A0 LTR MaLR -256 109 31 6 1228 282 411 43 10 chr15 84360779 84360988 -19133986 - MLT1A1 LTR MaLR -190 218 3 6 1228 225 170 85 0 chr15 84361254 84361301 -19133673 + Lx9 LINE L1 7110 7160 -484 6 1228 703 149 274 0 chr15 84361331 84361499 -19133475 - MTD LTR MaLR 0 419 206 6 1228 182 62 31 0 chr15 84361666 84361698 -19133276 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 6 1228 1140 102 0 0 chr15 84361705 84361852 -19133122 - B1_Mus1 SINE Alu -1 147 1 6 1228 789 343 103 7 chr15 84362151 84362752 -19132222 + L1M5 LINE L1 2558 3216 -2930 6 1228 235 100 50 0 chr15 84363202 84363242 -19131732 + (CAGAGA)n Simple_repeat Simple_repeat 5 46 0 6 1228 697 189 0 27 chr15 84363244 84363429 -19131545 + GA-rich Low_complexity Low_complexity 1 180 0 6 1228 507 292 153 25 chr15 84363598 84363879 -19131095 + MLT1D LTR MaLR 105 421 -84 6 1228 335 233 23 25 chr15 84364118 84364222 -19130752 + MTEa LTR MaLR 273 379 0 6 1228 611 226 7 29 chr15 84364515 84364652 -19130322 - RSINE1 SINE B4 -29 136 3 6 1228 634 308 161 75 chr15 84365005 84365941 -19129033 - L1MDa LINE L1 -4133 2500 1483 6 1228 838 174 14 0 chr15 84365941 84366079 -19128895 - B1_Mur2 SINE Alu -8 141 2 6 1228 634 308 161 75 chr15 84366079 84366453 -19128521 - L1MDa LINE L1 -5151 1482 1077 6 1228 182 67 0 82 chr15 84366456 84366505 -19128469 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 6 1228 768 238 18 0 chr15 84366539 84366703 -19128271 - B3A SINE B2 -31 167 1 6 1228 921 223 20 25 chr15 84368099 84368301 -19126673 - B3 SINE B2 -1 215 15 6 1228 236 263 154 26 chr15 84368808 84368924 -19126050 + RMER15 LTR ERVL 432 562 -13 6 1228 2031 115 19 65 chr15 84368924 84369295 -19125679 - ORR1B1 LTR MaLR 0 394 41 6 1228 577 251 94 93 chr15 84369521 84369884 -19125090 - RMER10A LTR ERVL -12 430 53 6 1228 186 118 0 0 chr15 84370033 84370067 -19124907 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1228 442 234 167 16 chr15 84370074 84370200 -19124774 - RSINE1 SINE B4 -17 148 4 6 1228 688 231 99 31 chr15 84370234 84370426 -19124548 - B3 SINE B2 -10 206 2 6 1228 546 273 57 19 chr15 84371382 84371539 -19123435 - RSINE1 SINE B4 0 165 3 6 1228 477 34 0 0 chr15 84372084 84372143 -19122831 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1228 551 81 12 0 chr15 84372649 84372735 -19122239 + (TG)n Simple_repeat Simple_repeat 1 87 0 6 1228 367 250 0 37 chr15 84372789 84372897 -19122077 - MLT1A1 LTR MaLR 0 408 305 6 1228 486 0 0 0 chr15 84372956 84373010 -19121964 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 1228 580 203 29 111 chr15 84373941 84374113 -19120861 + RMER15 LTR ERVL 3 160 -415 6 1228 1163 281 42 0 chr15 84374111 84374399 -19120575 + RMER15 LTR ERVL 275 574 -1 6 1228 328 340 84 69 chr15 84374475 84374750 -19120224 + L1M4 LINE L1 3728 4006 -2140 6 1228 510 117 38 19 chr15 84374901 84375006 -19119968 + CT-rich Low_complexity Low_complexity 5 111 0 7 1228 250 196 161 0 chr15 84375032 84375088 -19119886 - ID_B1 SINE B4 -62 162 98 7 1228 239 303 45 27 chr15 84375104 84375216 -19119758 + L1M3 LINE L1 4193 4306 -1834 7 1228 517 172 0 31 chr15 84375230 84375326 -19119648 + RSINE1 SINE B4 3 95 -70 7 1228 432 321 54 65 chr15 84375376 84375729 -19119245 + L1M4 LINE L1 4331 4679 -1467 6 1228 404 309 8 8 chr15 84375765 84375889 -19119085 + MER3 DNA MER1_type 86 209 0 7 1228 789 211 89 0 chr15 84376167 84376347 -19118627 + B3A SINE B2 2 197 -1 7 1228 1005 135 177 0 chr15 84376603 84376754 -19118220 - URR1A DNA MER1_type 0 226 64 7 1228 2302 108 50 151 chr15 84376754 84377122 -19117852 - RLTR23 LTR ERV1 0 430 112 7 1228 288 0 0 0 chr15 84377122 84377154 -19117820 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 7 1228 2302 108 50 151 chr15 84377154 84377263 -19117711 - RLTR23 LTR ERV1 -319 111 1 7 1228 1005 135 177 0 chr15 84377263 84377303 -19117671 - URR1A DNA MER1_type -163 63 2 7 1228 656 308 114 4 chr15 84377462 84377716 -19117258 + Lx8 LINE L1 6930 7211 -262 7 1228 312 341 11 0 chr15 84377733 84377824 -19117150 + RMER15 LTR ERVL 371 462 -113 7 1228 375 78 0 0 chr15 84378096 84378147 -19116827 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 1228 243 330 9 18 chr15 84378220 84378331 -19116643 + Lx8 LINE L1 7353 7462 -11 7 1228 874 162 24 171 chr15 84378937 84379183 -19115791 + B3 SINE B2 4 213 -3 7 1228 2531 175 12 25 chr15 84379399 84379909 -19115065 - RMER20A LTR ERVK -3 513 11 7 1228 2837 122 45 0 chr15 84380964 84381367 -19113607 - MTC LTR MaLR 0 421 1 7 1228 1092 249 92 35 chr15 84381501 84381847 -19113127 - ORR1D2 LTR MaLR -2 368 3 7 1228 22 0 0 0 chr15 84381919 84381941 -19113033 + AT_rich Low_complexity Low_complexity 1 22 0 7 1228 635 171 7 151 chr15 84381953 84382105 -19112869 - B3 SINE B2 -86 130 1 7 1228 459 221 78 17 chr15 84388557 84388672 -19106302 - ID_B1 SINE B4 0 224 103 7 1228 339 281 0 0 chr15 84388681 84388763 -19106211 - ID_B1 SINE B4 -37 187 106 7 1228 217 290 41 41 chr15 84388763 84388778 -19106196 - B1F1 SINE Alu -40 109 13 7 1228 327 235 73 0 chr15 84388792 84388860 -19106114 - ID2 SINE ID -8 75 3 7 1228 207 0 0 0 chr15 84388918 84388941 -19106033 + (CG)n Simple_repeat Simple_repeat 2 24 0 7 1228 225 0 0 0 chr15 84388941 84388965 -19106009 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 1228 428 163 12 0 chr15 84389661 84389747 -19105227 + GA-rich Low_complexity Low_complexity 2 88 0 7 1228 3302 57 2 5 chr15 84390478 84390886 -19104088 + MTB_Mm LTR MaLR 1 407 0 7 1228 288 0 0 0 chr15 84390988 84391020 -19103954 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 1228 449 315 24 0 chr15 84391059 84391224 -19103750 - RLTR42-int LTR ERVK -4197 1325 1157 7 1228 488 254 196 34 chr15 84391365 84391501 -19103473 - ID_B1 SINE B4 0 224 54 7 1228 1862 162 128 54 chr15 84391501 84391930 -19103044 + RMER6B LTR ERVK 1 461 0 7 1228 488 254 196 34 chr15 84391930 84391972 -19103002 - ID SINE ID -171 53 17 7 1228 2566 196 79 30 chr15 84392374 84392584 -19102390 + Lx5 LINE L1 6372 6591 -459 7 1228 2931 46 0 0 chr15 84392584 84392930 -19102044 + ORR1A1 LTR MaLR 1 346 0 7 1228 2566 196 79 30 chr15 84392930 84393288 -19101686 + Lx5 LINE L1 6592 6968 -82 7 1228 237 132 0 0 chr15 84393355 84393393 -19101581 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 7 1228 355 224 15 0 chr15 84394018 84394084 -19100890 + RSINE1 SINE B4 22 88 -77 7 1228 1356 255 106 26 chr15 84394084 84394471 -19100503 - MTD LTR MaLR -1 418 1 7 1228 316 303 78 47 chr15 84394562 84394794 -19100180 + L1MB8 LINE L1 5816 6054 -124 7 1228 1225 98 60 0 chr15 84394908 84395092 -19099882 + B2_Mm2 SINE B2 1 195 0 7 1228 355 327 25 31 chr15 84395167 84395328 -19099646 + RSINE1 SINE B4 1 160 -5 7 1228 413 232 12 0 chr15 84395503 84395585 -19099389 - ORR1D2 LTR MaLR -4 366 284 7 1228 1452 132 14 0 chr15 84395582 84395794 -19099180 - URR1B DNA MER1_type -6 219 5 7 1228 1278 229 32 32 chr15 84395787 84396067 -19098907 - ORR1D2 LTR MaLR -88 282 3 7 1228 298 277 57 69 chr15 84396067 84396226 -19098748 + L1MD1 LINE L1 4166 4322 -1824 7 1228 1922 172 36 14 chr15 84396309 84396668 -19098306 - ORR1D2 LTR MaLR -3 367 1 7 1228 216 200 0 0 chr15 84396736 84396786 -19098188 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 1228 447 19 0 0 chr15 84396800 84396852 -19098122 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 1228 279 0 0 0 chr15 84396852 84396882 -19098092 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 1228 559 279 63 27 chr15 84397212 84397433 -19097541 + L1MD1 LINE L1 4637 4865 -1281 7 1228 388 287 0 0 chr15 84397464 84397558 -19097416 - RSINE1 SINE B4 -35 130 37 7 1228 613 309 32 32 chr15 84397611 84397925 -19097049 + L1MD1 LINE L1 4869 5182 -964 7 1228 343 243 76 19 chr15 84397927 84398032 -19096942 + B1_Mur1 SINE Alu 2 112 -37 7 1228 568 208 33 0 chr15 84398134 84398375 -19096599 + (CA)n Simple_repeat Simple_repeat 1 249 0 7 1228 262 67 44 0 chr15 84398424 84398469 -19096505 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 1228 23 68 0 0 chr15 84398486 84398530 -19096444 + AT_rich Low_complexity Low_complexity 1 44 0 7 1228 611 322 103 27 chr15 84398530 84399040 -19095934 + L1MD1 LINE L1 5687 6234 -8 7 1228 351 206 68 0 chr15 84399035 84399108 -19095866 - Lx8 LINE L1 -823 6650 6573 7 1228 1159 81 0 0 chr15 84399373 84399521 -19095453 + B1_Mus1 SINE Alu 1 148 0 7 1228 1381 67 22 6 chr15 84399528 84399709 -19095265 - B2_Mm1t SINE B2 -7 186 3 7 1228 435 124 0 82 chr15 84399723 84399820 -19095154 + RMER1B Other Other 923 1011 -55 7 1228 4078 67 19 7 chr15 84399820 84400359 -19094615 - MT2B2 LTR ERVL -38 546 2 7 1228 207 0 0 0 chr15 84400387 84400410 -19094564 + (GA)n Simple_repeat Simple_repeat 2 24 0 7 1228 291 274 0 0 chr15 84400673 84400735 -19094239 - ID4 SINE ID -19 64 3 7 1228 2041 170 22 22 chr15 84400784 84401150 -19093824 + ORR1D1 LTR MaLR 1 366 -8 7 1228 180 0 0 0 chr15 84401150 84401170 -19093804 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1228 240 224 17 17 chr15 84401306 84401365 -19093609 - MLT1A1 LTR MaLR -7 401 343 7 1228 2036 229 107 50 chr15 84401431 84402009 -19092965 + RLTR18 LTR ERVK 1 611 -5 7 1228 1326 240 71 9 chr15 84402688 84403024 -19091950 - ORR1E LTR MaLR -2 357 1 7 1228 303 289 129 29 chr15 84403147 84403286 -19091688 - BLACKJACK DNA AcHobo -454 2490 2338 7 1228 537 204 53 9 chr15 84403289 84403403 -19091571 + PB1D7 SINE Alu 1 119 -1 7 1228 517 312 12 36 chr15 84403404 84403570 -19091404 + RSINE1 SINE B4 1 162 -3 7 1228 830 214 120 0 chr15 84403619 84403811 -19091163 + B3 SINE B2 2 216 0 7 1228 1475 332 54 18 chr15 84403861 84404545 -19090429 - BLACKJACK DNA AcHobo -600 2344 1636 7 1228 251 247 33 11 chr15 84404858 84404948 -19090026 + L1M5 LINE L1 5694 5785 -455 7 1228 334 225 42 0 chr15 84404997 84405068 -19089906 - MER5A DNA MER1_type -59 130 57 7 1228 510 17 0 0 chr15 84405742 84405801 -19089173 + (TC)n Simple_repeat Simple_repeat 2 60 0 7 1228 261 0 0 0 chr15 84405803 84405832 -19089142 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 1228 787 165 11 0 chr15 84406379 84406555 -19088419 + (CA)n Simple_repeat Simple_repeat 1 178 0 7 1228 701 182 15 22 chr15 84406570 84406841 -19088133 + (CA)n Simple_repeat Simple_repeat 1 268 0 7 1228 283 311 48 40 chr15 84407386 84407510 -19087464 + MER92B LTR ERV1 405 529 -107 7 1228 443 275 200 16 chr15 84407906 84408091 -19086883 - ID_B1 SINE B4 -2 222 4 7 1228 244 316 95 0 chr15 84408142 84408237 -19086737 - PB1D7 SINE Alu 0 120 17 7 1228 826 93 0 0 chr15 84408238 84408345 -19086629 + B2_Mm2 SINE B2 1 107 -88 7 1228 193 156 61 20 chr15 84408349 84408447 -19086527 + (TA)n Simple_repeat Simple_repeat 2 103 0 7 1228 255 295 77 0 chr15 84408711 84408789 -19086185 - RMER21A LTR ERV1 -258 689 606 7 1228 315 268 84 0 chr15 84409096 84409167 -19085807 + ID SINE ID 2 78 -146 7 1228 861 161 0 28 chr15 84409306 84409447 -19085527 + B1_Mur1 SINE Alu 5 141 -8 7 1228 1459 231 40 35 chr15 84409905 84410277 -19084697 - ORR1D1 LTR MaLR 0 374 1 7 153 2227 146 112 18 chr15 84410296 84410679 -19084295 + MTC LTR MaLR 1 419 -2 7 1229 1642 131 28 28 chr15 84410836 84411120 -19083854 - ORR1D1-int LTR MaLR -1086 284 1 7 1229 2062 156 18 50 chr15 84411120 84411504 -19083470 - ORR1D1 LTR MaLR 0 374 3 7 1229 338 304 201 45 chr15 84411507 84411686 -19083288 - MER21B LTR ERV1 -162 701 495 7 1229 1790 284 42 29 chr15 84411694 84412212 -19082762 - RMER5 LTR ERV1 -8 526 2 7 1229 249 283 125 42 chr15 84412223 84412319 -19082655 - MER21B LTR ERV1 -396 467 364 7 1229 271 360 80 9 chr15 84412495 84412607 -19082367 - MER21B LTR ERV1 -725 138 19 7 1229 363 88 66 0 chr15 84412796 84412887 -19082087 + (CA)n Simple_repeat Simple_repeat 1 97 0 7 1229 181 138 62 21 chr15 84412990 84413086 -19081888 + (CA)n Simple_repeat Simple_repeat 2 101 0 7 1229 284 276 23 0 chr15 84413209 84413296 -19081678 + Kanga11a DNA Tc2 343 431 -539 7 1229 760 275 22 16 chr15 84413693 84413878 -19081096 - ID_B1 SINE B4 -2 222 37 7 1229 1767 102 87 11 chr15 84413878 84414165 -19080809 + ORR1B2 LTR MaLR 1 309 -58 7 1229 360 111 0 0 chr15 84414165 84414219 -19080755 + (TC)n Simple_repeat Simple_repeat 2 55 0 7 1229 238 230 0 47 chr15 84414219 84414283 -19080691 + T-rich Low_complexity Low_complexity 4 64 0 7 1229 1084 112 84 0 chr15 84414285 84414463 -19080511 - B2_Mm2 SINE B2 -1 194 2 7 1229 440 178 0 27 chr15 84414463 84414538 -19080436 + ORR1B2 LTR MaLR 295 367 0 7 1229 1312 144 46 5 chr15 84415559 84415775 -19079199 + URR1B DNA MER1_type 1 225 0 7 1229 1163 169 201 86 chr15 84416749 84416892 -19078082 + ORR1D1 LTR MaLR 2 179 -195 7 1229 315 0 0 0 chr15 84416892 84416927 -19078047 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 7 1229 1163 169 201 86 chr15 84416927 84417049 -19077925 + ORR1D1 LTR MaLR 180 303 -71 7 1229 919 170 0 7 chr15 84417049 84417197 -19077777 - B1_Mur3 SINE Alu 0 149 3 7 1229 1163 169 201 86 chr15 84417197 84417230 -19077744 + ORR1D1 LTR MaLR 304 335 -39 7 1229 529 134 0 12 chr15 84417230 84417313 -19077661 + BC1_Mm scRNA scRNA 2 83 -69 7 1229 329 140 0 0 chr15 84417318 84417368 -19077606 + ORR1D1 LTR MaLR 325 374 0 7 1229 333 286 112 50 chr15 84417618 84417887 -19077087 - ORR1E LTR MaLR -4 375 53 7 1229 660 214 0 0 chr15 84418192 84418365 -19076609 + (TG)n Simple_repeat Simple_repeat 2 174 0 7 1229 869 186 97 10 chr15 84418374 84418570 -19076404 - ORR1E LTR MaLR -146 213 1 7 1229 180 250 110 40 chr15 84419055 84419155 -19075819 + MIRb SINE MIR 18 124 -144 7 1229 201 158 79 0 chr15 84419231 84419269 -19075705 + G-rich Low_complexity Low_complexity 2 42 0 7 1229 338 338 107 30 chr15 84419382 84419550 -19075424 + LTR16A LTR ERVL 121 301 -150 7 1229 244 261 0 0 chr15 84419550 84419596 -19075378 + G-rich Low_complexity Low_complexity 1 46 0 8 1229 1052 267 5 0 chr15 84419698 84419915 -19075059 - ID_B1 SINE B4 0 224 7 8 1229 197 316 0 50 chr15 84420485 84420545 -19074429 - L2c LINE L2 -9 3378 3322 8 1229 499 218 70 43 chr15 84420909 84421024 -19073950 + MTEa LTR MaLR 6 123 -256 8 1229 343 247 14 0 chr15 84421025 84421098 -19073876 + MTEa LTR MaLR 85 158 -221 8 1229 1069 207 102 17 chr15 84421098 84421334 -19073640 + MTEa LTR MaLR 120 375 -4 8 1229 192 229 62 0 chr15 84424416 84424464 -19070510 - L2c LINE L2 -229 3146 3096 8 1229 240 255 122 9 chr15 84424620 84424724 -19070250 + B4A SINE B4 115 230 -62 8 1229 336 183 28 14 chr15 84424724 84424796 -19070178 + B2_Mm2 SINE B2 1 73 -122 8 1229 387 0 0 0 chr15 84424810 84424853 -19070121 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 1229 485 136 10 0 chr15 84424853 84424956 -19070018 + (GA)n Simple_repeat Simple_repeat 1 104 0 8 1229 225 295 78 47 chr15 84424975 84425039 -19069935 + B4A SINE B4 223 288 -4 8 1229 218 196 0 0 chr15 84425269 84425315 -19069659 + GA-rich Low_complexity Low_complexity 1 46 0 8 1229 202 182 0 0 chr15 84425315 84425348 -19069626 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1229 303 188 0 0 chr15 84425348 84425396 -19069578 + HAL1-3A_ME LINE L1 1975 2022 -836 8 1229 306 297 80 33 chr15 84426110 84426260 -19068714 - HAL1 LINE L1 -7 2500 2344 8 1229 323 266 99 85 chr15 84426372 84426573 -19068401 - ORR1E LTR MaLR -146 213 10 8 1229 1096 230 4 35 chr15 84427052 84427282 -19067692 - ID_B1 SINE B4 0 224 2 8 1229 381 93 0 0 chr15 84427309 84427363 -19067611 + (GA)n Simple_repeat Simple_repeat 1 54 0 8 1229 605 267 148 33 chr15 84427378 84427622 -19067352 - B4 SINE B4 -19 273 2 8 1229 389 310 89 89 chr15 84427646 84427993 -19066981 + ORR1D2 LTR MaLR 24 370 0 8 1229 533 226 126 25 chr15 84428919 84429057 -19065917 + ORR1E LTR MaLR 2 155 -204 8 1229 322 209 155 49 chr15 84429057 84429237 -19065737 - ORR1D2 LTR MaLR 0 370 154 8 1229 299 295 62 21 chr15 84429612 84429709 -19065265 - PB1D10 SINE Alu -11 106 6 8 1229 405 0 0 0 chr15 84430965 84431010 -19063964 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 1229 389 109 16 0 chr15 84431010 84431074 -19063900 + (GA)n Simple_repeat Simple_repeat 1 65 0 8 1229 625 321 51 25 chr15 84431171 84431446 -19063528 - B4A SINE B4 -10 282 1 8 1229 747 228 164 0 chr15 84431481 84431652 -19063322 + B3 SINE B2 7 205 -11 8 1229 2560 125 40 20 chr15 84435093 84435492 -19059482 - MTB_Mm LTR MaLR 0 407 1 8 1229 251 327 76 87 chr15 84435611 84435638 -19059336 - MLT1J LTR MaLR -117 395 374 8 1229 1949 166 104 62 chr15 84435638 84435998 -19058976 + MTC LTR MaLR 1 387 -34 8 1229 479 0 49 0 chr15 84435998 84436059 -19058915 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 8 1229 1167 51 0 0 chr15 84436059 84436196 -19058778 - B1_Mus2 SINE Alu -10 137 1 8 1229 1949 166 104 62 chr15 84436196 84436238 -19058736 + MTC LTR MaLR 388 420 -1 8 1229 251 327 76 87 chr15 84436238 84436300 -19058674 - MLT1J LTR MaLR -139 373 304 8 1229 378 0 0 0 chr15 84436300 84436342 -19058632 + (TC)n Simple_repeat Simple_repeat 1 42 0 8 1229 251 327 76 87 chr15 84436342 84436469 -19058505 - MLT1J LTR MaLR -209 303 187 8 1229 1103 80 0 0 chr15 84436469 84436607 -19058367 + B1_Mus1 SINE Alu 1 138 -10 8 1229 738 93 0 0 chr15 84436607 84436715 -19058259 + (GAA)n Simple_repeat Simple_repeat 2 109 0 8 1229 251 327 76 87 chr15 84436715 84436783 -19058191 - MLT1J LTR MaLR -326 186 113 8 1229 943 106 15 0 chr15 84437285 84437417 -19057557 + B1_Mur4 SINE Alu 5 138 -12 8 1229 567 43 0 0 chr15 84437418 84437488 -19057486 + (GA)n Simple_repeat Simple_repeat 1 70 0 8 1229 834 256 50 29 chr15 84437555 84437796 -19057178 + RLTR1D LTR ERV1 1 246 -359 8 1229 3190 67 14 7 chr15 84437796 84438216 -19056758 + RLTR1D LTR ERV1 183 605 0 8 1229 240 59 0 0 chr15 84438376 84438410 -19056564 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 1229 1069 289 114 37 chr15 84439054 84439511 -19055463 - RMER5 LTR ERV1 0 534 43 8 1229 396 338 66 81 chr15 84441861 84442209 -19052765 + MLT1C LTR MaLR 117 459 -8 8 1229 230 274 77 18 chr15 84444303 84444412 -19050562 + MIR3 SINE MIR 85 197 -65 8 1229 195 298 0 0 chr15 84445127 84445211 -19049763 + GA-rich Low_complexity Low_complexity 3 86 0 8 1229 303 340 65 20 chr15 84445374 84445527 -19049447 - RMER15 LTR ERVL -11 564 405 8 1229 222 118 0 0 chr15 84446450 84446484 -19048490 + (CAGA)n Simple_repeat Simple_repeat 4 37 0 8 1229 1185 124 170 5 chr15 84446687 84446881 -19048093 + URR1A DNA MER1_type 1 226 0 8 1229 2436 133 46 112 chr15 84447178 84447653 -19047321 - RLTR41 LTR ERV1 -2 444 1 8 1229 499 153 39 39 chr15 84447784 84447886 -19047088 - B1F2 SINE Alu -38 111 10 8 1229 183 177 48 0 chr15 84448001 84448063 -19046911 + CT-rich Low_complexity Low_complexity 1 65 0 8 1229 264 269 0 88 chr15 84448282 84448384 -19046590 - B4A SINE B4 0 292 200 8 1229 2344 131 2 70 chr15 84449775 84450187 -19044787 + RLTR41 LTR ERV1 63 446 0 8 1229 699 252 7 0 chr15 84451049 84451196 -19043778 + B1_Mur3 SINE Alu 1 148 -1 8 1229 441 0 0 0 chr15 84451951 84452000 -19042974 + (CA)n Simple_repeat Simple_repeat 1 49 0 8 1229 369 0 0 0 chr15 84452001 84452042 -19042932 + (CCA)n Simple_repeat Simple_repeat 2 42 0 8 1229 293 253 24 24 chr15 84452046 84452131 -19042843 - B4A SINE B4 -204 88 4 8 1229 352 269 21 41 chr15 84452141 84452238 -19042736 - ID_B1 SINE B4 -36 188 94 8 1229 459 0 0 0 chr15 84453082 84453133 -19041841 + (TC)n Simple_repeat Simple_repeat 1 51 0 8 1229 528 212 9 0 chr15 84453949 84454062 -19040912 + PB1D9 SINE Alu 7 120 0 8 1229 261 324 19 0 chr15 84454072 84454177 -19040797 + L1MD2 LINE L1 5607 5713 -529 8 1229 333 68 0 0 chr15 84454178 84454222 -19040752 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1229 235 318 105 31 chr15 84454641 84454803 -19040171 + L1MD2 LINE L1 6010 6183 -176 8 1229 787 211 72 0 chr15 84454933 84455113 -19039861 - ID_B1 SINE B4 -31 193 1 8 1229 324 120 0 0 chr15 84455125 84455175 -19039799 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 8 1229 1027 135 0 13 chr15 84455175 84455325 -19039649 - B1_Mus1 SINE Alu 0 148 1 8 1229 267 316 35 57 chr15 84455369 84455510 -19039464 - MER20 DNA MER1_type -64 155 18 8 1229 2147 171 81 20 chr15 84456978 84457371 -19037603 + MTD LTR MaLR 1 417 -2 8 1229 515 276 0 0 chr15 84459095 84459218 -19035756 + RSINE1 SINE B4 2 124 -41 8 1229 264 30 0 0 chr15 84459218 84459251 -19035723 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1229 281 180 50 0 chr15 84459264 84459434 -19035540 + (CAGA)n Simple_repeat Simple_repeat 1 178 0 8 1229 360 200 0 0 chr15 84459434 84459549 -19035425 + GA-rich Low_complexity Low_complexity 2 116 0 8 1229 204 222 0 0 chr15 84459544 84459616 -19035358 + (CA)n Simple_repeat Simple_repeat 2 73 0 8 1229 325 298 97 53 chr15 84459641 84459847 -19035127 + MLT1B LTR MaLR 164 378 -12 8 1229 1111 138 193 0 chr15 84460866 84461047 -19033927 - B3 SINE B2 0 216 1 8 1229 290 108 36 12 chr15 84461066 84461150 -19033824 + T-rich Low_complexity Low_complexity 4 89 0 8 1229 1200 54 0 0 chr15 84461162 84461309 -19033665 - B1_Mus2 SINE Alu 0 147 1 8 1229 1217 75 0 0 chr15 84461323 84461470 -19033504 - B1_Mm SINE Alu 0 147 1 8 1229 238 380 30 18 chr15 84461770 84461936 -19033038 - L1MA4 LINE L1 -370 5930 5763 8 1229 257 260 0 40 chr15 84463121 84463197 -19031777 + L1MB7 LINE L1 5927 5999 -185 8 1229 627 227 143 89 chr15 84463237 84463440 -19031534 + ID_B1 SINE B4 11 224 0 8 1229 832 255 182 14 chr15 84463623 84463884 -19031090 - MTEa LTR MaLR -1 378 70 8 1229 1103 113 11 22 chr15 84463884 84464065 -19030909 + B2_Mm2 SINE B2 1 179 -16 8 1229 249 135 19 0 chr15 84464090 84464142 -19030832 + B2_Mm1t SINE B2 127 179 -14 8 1229 441 0 0 0 chr15 84464142 84464191 -19030783 + (GAAA)n Simple_repeat Simple_repeat 4 52 0 8 1229 347 224 53 0 chr15 84464193 84464269 -19030705 - MTEa LTR MaLR -297 82 3 8 1229 267 31 0 0 chr15 84464269 84464301 -19030673 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 1229 705 56 0 0 chr15 84464301 84464391 -19030583 + (TA)n Simple_repeat Simple_repeat 1 90 0 8 1229 579 206 28 6 chr15 84464611 84464787 -19030187 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 8 1229 200 143 29 0 chr15 84465186 84465221 -19029753 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 1229 227 271 43 0 chr15 84465245 84465315 -19029659 - MIRc SINE MIR -77 191 119 8 1229 204 253 0 0 chr15 84465892 84465983 -19028991 + G-rich Low_complexity Low_complexity 1 91 0 8 1229 237 246 18 0 chr15 84466064 84466121 -19028853 - MTD LTR MaLR -12 407 350 8 1229 1102 84 138 0 chr15 84466121 84466288 -19028686 + B2_Mm1t SINE B2 2 191 -2 8 1229 189 0 0 0 chr15 84466337 84466358 -19028616 + (A)n Simple_repeat Simple_repeat 1 21 0 8 1229 904 180 248 5 chr15 84466358 84466576 -19028398 - MTD LTR MaLR -59 360 90 8 1229 216 0 0 0 chr15 84466812 84466836 -19028138 + (TTA)n Simple_repeat Simple_repeat 3 26 0 8 1229 259 286 90 13 chr15 84466869 84466947 -19028027 + B4 SINE B4 3 86 -206 8 1229 5501 33 0 2 chr15 84466960 84467595 -19027379 + L1Md_A LINE L1 5949 6582 0 8 1229 236 204 75 0 chr15 84467661 84467736 -19027238 - PB1D10 SINE Alu -2 147 40 8 1229 816 282 47 93 chr15 84467728 84468029 -19026945 - RMER15 LTR ERVL -14 561 275 8 1229 332 191 59 69 chr15 84468027 84468128 -19026846 - RMER15 LTR ERVL -415 160 61 8 1229 216 0 0 0 chr15 84468195 84468219 -19026755 + (T)n Simple_repeat Simple_repeat 1 24 0 8 1229 1900 161 12 99 chr15 84468288 84468710 -19026264 + ORR1C1 LTR MaLR 1 421 0 8 1229 355 234 13 0 chr15 84468713 84468797 -19026177 + MTEa LTR MaLR 1 85 -294 8 1229 276 200 0 0 chr15 84468797 84468862 -19026112 + (TG)n Simple_repeat Simple_repeat 1 65 0 8 1229 697 254 199 11 chr15 84468896 84469163 -19025811 + MTEa LTR MaLR 63 379 0 8 1229 747 146 0 18 chr15 84469194 84469532 -19025442 + (CA)n Simple_repeat Simple_repeat 1 331 0 8 1229 459 0 0 0 chr15 84470728 84470779 -19024195 + (TC)n Simple_repeat Simple_repeat 1 51 0 8 1229 225 0 0 0 chr15 84470779 84470803 -19024171 + (CA)n Simple_repeat Simple_repeat 1 25 0 8 1229 672 256 70 0 chr15 84470953 84471125 -19023849 + B3 SINE B2 6 189 -27 9 1229 305 323 21 10 chr15 84471260 84471357 -19023617 + PB1D10 SINE Alu 1 98 -19 9 1229 2848 131 48 85 chr15 84471414 84471955 -19023019 + RLTR28 LTR ERVL 2 522 -2 9 1229 186 358 18 45 chr15 84472125 84472236 -19022738 - MIR SINE MIR -56 152 45 9 1229 330 265 0 0 chr15 84472299 84472367 -19022607 + 5S rRNA rRNA 23 90 -31 9 1229 300 269 8 92 chr15 84472795 84472847 -19022127 - B2_Mm2 SINE B2 -75 120 1 9 1229 440 215 0 0 chr15 84472847 84472926 -19022048 - RSINE1 SINE B4 -85 80 2 9 1229 272 254 14 0 chr15 84473401 84473472 -19021502 + MLT1C LTR MaLR 113 184 -283 9 1229 459 0 0 0 chr15 84473477 84473528 -19021446 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 1229 263 317 80 119 chr15 84473532 84473631 -19021343 + MLT1C LTR MaLR 156 238 -229 9 1229 333 0 0 0 chr15 84473631 84473668 -19021306 + (CA)n Simple_repeat Simple_repeat 2 38 0 9 1229 263 317 80 119 chr15 84473668 84473819 -19021155 + MLT1C LTR MaLR 239 396 -71 9 1229 240 272 43 21 chr15 84473907 84474001 -19020973 - LTR40a LTR ERVL -423 96 1 9 1229 2481 176 143 7 chr15 84474301 84474798 -19020176 + RMER1B Other Other 278 949 -117 9 1229 297 0 0 0 chr15 84474798 84474831 -19020143 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 9 1229 2481 155 124 8 chr15 84474831 84474908 -19020066 + RMER1B Other Other 950 1053 -13 9 1229 378 108 40 0 chr15 84474918 84474992 -19019982 + (GGA)n Simple_repeat Simple_repeat 3 79 0 9 1229 1059 94 0 0 chr15 84474992 84475172 -19019802 + (GAA)n Simple_repeat Simple_repeat 1 180 0 9 1229 528 111 0 0 chr15 84475172 84475271 -19019703 + (CAG)n Simple_repeat Simple_repeat 3 101 0 9 1229 347 0 23 0 chr15 84475411 84475454 -19019520 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 9 1229 626 207 16 0 chr15 84475461 84475582 -19019392 + B1_Mur1 SINE Alu 18 140 -9 9 1229 258 0 71 0 chr15 84475582 84475624 -19019350 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 9 1229 1557 217 183 33 chr15 84475672 84475733 -19019241 + RMER15 LTR ERVL 11 70 -505 9 1229 1308 118 11 0 chr15 84475733 84475920 -19019054 + B2_Mm1t SINE B2 1 189 -4 9 1229 1557 217 183 33 chr15 84475920 84476349 -19018625 + RMER15 LTR ERVL 71 575 0 9 1229 782 233 68 0 chr15 84476535 84476698 -19018276 + ORR1D2 LTR MaLR 1 174 -196 9 1229 1524 181 154 81 chr15 84476705 84476901 -19018073 + RMER20A LTR ERVK 4 186 -330 9 1229 1080 83 0 20 chr15 84476901 84477039 -19017935 + B1_Mus1 SINE Alu 2 137 -11 9 1229 245 29 0 29 chr15 84477039 84477074 -19017900 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 9 1229 1524 181 154 81 chr15 84477083 84477294 -19017680 + RMER20A LTR ERVK 187 441 -75 9 1229 189 182 0 0 chr15 84477347 84477402 -19017572 + T-rich Low_complexity Low_complexity 1 55 0 9 1229 1092 64 50 0 chr15 84477403 84477543 -19017431 - B1_Mus2 SINE Alu 0 147 1 9 1229 732 259 85 5 chr15 84477605 84477818 -19017156 + ORR1D2 LTR MaLR 130 368 -2 9 1229 284 324 0 0 chr15 84477818 84477888 -19017086 + MTEa LTR MaLR 19 88 -291 9 1229 1659 200 3 40 chr15 84477962 84478338 -19016636 + RMER19C LTR ERVK 190 610 -1 9 1229 1172 249 44 37 chr15 84478339 84478635 -19016339 + MTEa LTR MaLR 82 379 0 9 1229 921 211 77 38 chr15 84478697 84479136 -19015838 + RLTR20A2 LTR ERVK 1 568 0 9 1229 182 62 31 0 chr15 84479668 84479700 -19015274 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 9 1229 868 266 126 24 chr15 84479708 84480001 -19014973 - MTD LTR MaLR -64 355 33 9 1229 319 305 12 56 chr15 84480428 84480555 -19014419 + B4A SINE B4 94 213 -79 9 1229 1000 125 11 11 chr15 84480555 84480733 -19014241 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 9 1229 889 146 0 14 chr15 84480733 84480747 -19014227 + B1_Mur4 SINE Alu 137 149 -1 9 1229 319 305 12 56 chr15 84480747 84480765 -19014209 + B4A SINE B4 214 245 -47 9 1229 1134 122 0 0 chr15 84480773 84480953 -19014021 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 9 1229 1845 243 98 6 chr15 84481195 84481676 -19013298 + RLTR11A2 LTR ERVK 1 525 -2 9 1229 758 277 21 5 chr15 84482122 84482314 -19012660 + B3A SINE B2 1 195 -3 9 1229 1232 55 0 0 chr15 84482373 84482519 -19012455 + B1_Mus1 SINE Alu 1 146 -2 9 1229 231 36 0 0 chr15 84482519 84482547 -19012427 + (GA)n Simple_repeat Simple_repeat 2 29 0 9 1229 507 248 60 8 chr15 84482573 84482707 -19012267 + B1F1 SINE Alu 1 141 -8 9 1229 1234 193 5 0 chr15 84482720 84482922 -19012052 + B3 SINE B2 5 207 -9 9 1229 231 239 0 0 chr15 84482924 84482991 -19011983 + (CATATA)n Simple_repeat Simple_repeat 5 71 0 9 1229 539 281 0 103 chr15 84482998 84483058 -19011916 + B1_Mur1 SINE Alu 2 56 -93 9 1229 1219 76 128 0 chr15 84483058 84483230 -19011744 + B2_Mm2 SINE B2 2 195 0 9 1229 539 281 0 103 chr15 84483230 84483324 -19011650 + B1_Mur1 SINE Alu 57 140 -9 9 1229 216 0 0 0 chr15 84483324 84483348 -19011626 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 9 1229 307 153 53 53 chr15 84484010 84484086 -19010888 - B1_Mus2 SINE Alu 0 147 72 9 1229 579 128 32 0 chr15 84484057 84484151 -19010823 + B1_Mus2 SINE Alu 50 146 -1 9 1229 637 267 204 0 chr15 84484216 84484388 -19010586 - ID_B1 SINE B4 -17 207 1 9 1229 27 0 0 0 chr15 84484390 84484417 -19010557 + AT_rich Low_complexity Low_complexity 1 27 0 9 1229 773 196 6 72 chr15 84485281 84485462 -19009512 + URR1A DNA MER1_type 58 226 0 9 1229 1707 181 65 40 chr15 84486528 84486926 -19008048 + MTD LTR MaLR 12 419 0 9 1229 798 222 46 168 chr15 84486926 84487191 -19007783 + MTD-int LTR MaLR 1 256 -1002 9 1229 987 217 59 5 chr15 84487191 84487395 -19007579 + B3 SINE B2 2 216 0 9 1229 798 222 46 168 chr15 84487395 84487475 -19007499 + MTD-int LTR MaLR 257 304 -954 9 1229 391 317 109 10 chr15 84489055 84489256 -19005718 - MLT1D LTR MaLR -263 242 22 9 1229 443 257 50 0 chr15 84489502 84489603 -19005371 + B1_Mur1 SINE Alu 32 137 -12 9 1229 323 100 57 0 chr15 84489603 84489673 -19005301 + CT-rich Low_complexity Low_complexity 1 74 0 9 1229 717 295 20 0 chr15 84489897 84490097 -19004877 + ID_B1 SINE B4 1 204 -20 9 1229 191 36 36 0 chr15 84490106 84490134 -19004840 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 9 1229 699 222 0 7 chr15 84490141 84490277 -19004697 + B1F2 SINE Alu 15 149 0 9 1229 667 249 136 29 chr15 84490368 84490678 -19004296 + L1MD1 LINE L1 5494 5836 -406 9 1229 229 222 111 0 chr15 84490972 84491035 -19003939 - B4 SINE B4 -221 71 2 9 1229 211 146 0 24 chr15 84491145 84491187 -19003787 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 9 1229 605 212 35 35 chr15 84491253 84491265 -19003709 - ID_B1 SINE B4 -1 223 212 9 1229 994 136 7 26 chr15 84491265 84491416 -19003558 - B1_Mur4 SINE Alu 0 150 3 9 1229 348 83 0 0 chr15 84491416 84491464 -19003510 + (TCTA)n Simple_repeat Simple_repeat 4 51 0 9 1229 605 212 35 35 chr15 84491464 84491592 -19003382 - ID_B1 SINE B4 -13 211 83 9 1229 1716 26 0 0 chr15 84491598 84491789 -19003185 - B2_Mm1t SINE B2 -1 192 2 9 1229 1156 172 44 15 chr15 84491980 84492186 -19002788 - B3 SINE B2 -4 212 1 9 1229 528 185 58 8 chr15 84492250 84492370 -19002604 + B1_Mur1 SINE Alu 1 126 -23 9 1229 414 57 0 0 chr15 84492856 84492909 -19002065 + (CA)n Simple_repeat Simple_repeat 2 54 0 9 1229 199 380 28 35 chr15 84495148 84495290 -18999684 + MIRb SINE MIR 36 176 -92 9 1229 993 234 19 19 chr15 84496071 84496276 -18998698 + ID_B1 SINE B4 4 208 -16 9 1229 217 147 0 0 chr15 84496321 84496355 -18998619 - PB1 SINE Alu -28 99 66 9 1229 212 364 77 13 chr15 84496639 84496795 -18998179 + MIR SINE MIR 23 188 -74 9 1229 255 305 63 0 chr15 84497685 84497780 -18997194 + MIR SINE MIR 45 145 -63 9 1229 185 271 93 12 chr15 84497920 84498006 -18996968 - MIR SINE MIR -90 172 80 9 1229 635 253 20 14 chr15 84498473 84498621 -18996353 - B1F SINE Alu 0 149 1 9 1229 243 0 0 0 chr15 84498659 84498686 -18996288 + (TCTG)n Simple_repeat Simple_repeat 4 30 0 9 1229 939 129 0 33 chr15 84498686 84498830 -18996144 - B1_Mus1 SINE Alu -7 141 2 9 1229 203 247 204 0 chr15 84499459 84499552 -18995422 - L2c LINE L2 -222 3165 3054 9 1229 231 193 0 0 chr15 84500460 84500509 -18994465 + MIR SINE MIR 81 129 -147 1 1229 387 0 0 0 chr15 84501000 84501043 -18993931 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1229 210 91 0 0 chr15 84501140 84501173 -18993801 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1229 203 133 0 0 chr15 84503117 84503147 -18991827 + (GGGGA)n Simple_repeat Simple_repeat 3 32 0 4 1229 492 250 0 0 chr15 84503570 84503666 -18991308 + RSINE1 SINE B4 49 144 -21 5 1229 255 31 0 0 chr15 84503672 84503704 -18991270 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1229 612 0 0 0 chr15 84503704 84503772 -18991202 + (GA)n Simple_repeat Simple_repeat 1 68 0 7 1229 474 151 138 32 chr15 84503999 84504122 -18990852 + B1F SINE Alu 2 137 -12 8 1229 705 228 86 37 chr15 84504135 84504242 -18990732 - B3A SINE B2 -2 196 82 9 1229 228 35 0 0 chr15 84504242 84504271 -18990703 + (CACCC)n Simple_repeat Simple_repeat 3 31 0 1 1229 705 228 86 37 chr15 84504271 84504350 -18990624 - B3A SINE B2 -117 81 1 9 1229 198 0 0 0 chr15 84508661 84508683 -18986291 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1229 380 277 138 0 chr15 84508685 84508815 -18986159 - B1F SINE Alu 0 149 2 1 1229 185 348 0 29 chr15 84509191 84509259 -18985715 - L2c LINE L2 -18 3369 3304 1 1229 609 237 33 60 chr15 84509622 84509806 -18985168 - B3 SINE B2 0 216 38 1 1229 240 366 12 0 chr15 84509820 84509902 -18985072 + RMER30 DNA MER1_type 119 201 -1 1 1229 309 26 0 0 chr15 84510096 84510134 -18984840 + (TCCCC)n Simple_repeat Simple_repeat 1 38 0 1 1229 24 0 0 0 chr15 84511964 84511988 -18982986 + GC_rich Low_complexity Low_complexity 1 24 0 1 1229 21 0 0 0 chr15 84512236 84512257 -18982717 + AT_rich Low_complexity Low_complexity 1 21 0 1 1229 283 323 115 26 chr15 84512650 84512841 -18982133 + MIRb SINE MIR 34 241 -27 1 1229 405 58 0 0 chr15 84513594 84513646 -18981328 + (TTCA)n Simple_repeat Simple_repeat 3 54 0 2 1229 180 320 79 49 chr15 84514417 84514581 -18980393 - L3 LINE CR1 -3580 909 741 2 1229 203 326 59 29 chr15 84514481 84514626 -18980348 - MIR SINE MIR -83 185 31 2 1229 236 76 43 57 chr15 84514705 84514775 -18980199 + (TTTG)n Simple_repeat Simple_repeat 1 69 0 2 1229 354 342 96 0 chr15 84515092 84515291 -18979683 + MLT1D LTR MaLR 1 218 -287 2 1229 280 303 98 0 chr15 84515308 84515440 -18979534 + MLT1D LTR MaLR 251 395 -110 2 1229 207 0 0 0 chr15 84516257 84516280 -18978694 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 2 1229 1501 59 27 0 chr15 84516298 84516485 -18978489 - B2_Mm2 SINE B2 -2 193 2 2 1229 360 306 111 37 chr15 84517650 84517840 -18977134 + MER58A DNA MER1_type 21 224 0 2 1229 198 325 109 42 chr15 84518762 84518881 -18976093 - MIRc SINE MIR -117 159 33 2 1229 749 255 112 0 chr15 84519763 84519959 -18975015 + ID_B1 SINE B4 2 219 -5 2 1229 669 182 38 8 chr15 84520896 84521029 -18973945 - B1_Mur2 SINE Alu -1 148 12 3 1229 245 282 62 6 chr15 84521038 84521139 -18973835 - PB1D10 SINE Alu -1 119 14 3 1229 291 310 54 48 chr15 84521287 84521453 -18973521 - L1M4 LINE L1 -687 5491 5325 3 1229 248 295 0 0 chr15 84521520 84521581 -18973393 - RMER30 DNA MER1_type -9 193 133 3 1229 230 240 18 143 chr15 84521780 84521892 -18973082 - B4A SINE B4 -146 146 49 3 1229 326 244 0 35 chr15 84521944 84522029 -18972945 + B1F SINE Alu 55 136 -13 3 1229 392 157 14 0 chr15 84522244 84522314 -18972660 - ID_B1 SINE B4 -1 223 153 3 1229 252 365 6 109 chr15 84522506 84522544 -18972430 - Tigger6a DNA MER2_type -688 395 361 3 1229 393 268 0 0 chr15 84522544 84522626 -18972348 - ID4 SINE ID -1 82 1 3 1229 252 365 6 109 chr15 84522626 84522762 -18972212 - Tigger6a DNA MER2_type -723 360 239 3 1229 306 313 130 0 chr15 84522796 84522927 -18972047 - Tigger6a DNA MER2_type -935 148 1 3 1229 1387 182 99 35 chr15 84523033 84523375 -18971599 - ORR1D2 LTR MaLR 0 370 7 3 1229 927 255 107 23 chr15 84524563 84524930 -18970044 - MTE2a LTR MaLR 0 379 6 4 1229 983 239 276 0 chr15 84525128 84525425 -18969549 - MTEa LTR MaLR 0 379 1 4 1229 189 40 0 0 chr15 84525985 84526010 -18968964 - L2b LINE L2 -32 3343 3319 4 1229 290 200 0 0 chr15 84526017 84526067 -18968907 - L2b LINE L2 -8 3367 3318 4 1229 243 182 0 68 chr15 84526067 84526126 -18968848 - L2b LINE L2 -4 3371 3317 4 1229 195 69 0 0 chr15 84527471 84527500 -18967474 + (CTG)n Simple_repeat Simple_repeat 2 30 0 4 1229 462 36 0 0 chr15 84527554 84527610 -18967364 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1229 197 242 76 0 chr15 84528967 84529033 -18965941 + L2b LINE L2 3085 3155 -220 4 1229 270 0 0 0 chr15 84530391 84530421 -18964553 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1229 252 269 30 0 chr15 84531444 84531511 -18963463 + B4 SINE B4 80 148 -144 4 1229 432 250 39 0 chr15 84531453 84531557 -18963417 + PB1D9 SINE Alu 6 113 -7 4 1229 606 71 0 0 chr15 84533651 84533735 -18961239 + (TG)n Simple_repeat Simple_repeat 1 84 0 5 1229 1167 68 0 7 chr15 84534259 84534406 -18960568 - B1_Mm SINE Alu -1 146 1 5 1229 1544 144 50 50 chr15 84534840 84534930 -18960044 - MTC LTR MaLR -120 301 201 5 1229 666 167 12 111 chr15 84534930 84535092 -18959882 - B1_Mur2 SINE Alu -1 148 3 5 1229 1544 144 50 50 chr15 84535092 84535301 -18959673 - MTC LTR MaLR -221 200 2 5 1229 248 256 22 117 chr15 84535543 84535680 -18959294 + CYRA11_Mm Unknown Y-chromosome 222 345 -272 5 1229 866 161 0 7 chr15 84535584 84535728 -18959246 - URR1A DNA MER1_type -80 146 4 5 1229 924 192 77 161 chr15 84535758 84536056 -18958918 - MT2A LTR ERVL -260 273 1 5 1229 731 234 0 20 chr15 84536673 84536821 -18958153 + B1_Mur1 SINE Alu 5 149 0 5 1229 532 224 261 0 chr15 84537158 84537323 -18957651 + ID_B1 SINE B4 3 210 -14 5 1229 848 113 0 22 chr15 84537346 84537482 -18957492 - B1_Mur1 SINE Alu -5 144 12 5 1229 264 243 31 126 chr15 84537384 84537511 -18957463 - MT2B2 LTR ERVL -319 265 151 6 1229 279 316 0 0 chr15 84538181 84538276 -18956698 + (CATA)n Simple_repeat Simple_repeat 4 98 0 6 1229 285 29 0 0 chr15 84538309 84538343 -18956631 + (TTA)n Simple_repeat Simple_repeat 3 36 0 6 1229 994 45 8 0 chr15 84538345 84538477 -18956497 - B1_Mus2 SINE Alu -6 141 9 6 1229 466 232 46 86 chr15 84538477 84538495 -18956479 - B4 SINE B4 -71 220 77 6 1229 3420 161 147 34 chr15 84538830 84539659 -18955315 + RMER19B LTR ERVK 35 896 -6 6 1229 1543 246 107 25 chr15 84540458 84540887 -18954087 + RMER1B Other Other 49 506 -560 6 153 6188 107 53 19 chr15 84540887 84541814 -18953160 + RMER17B LTR ERVK 1 958 0 6 1230 587 277 60 106 chr15 84541814 84541864 -18953110 + RMER1A Other Other 203 256 -774 6 1230 4031 207 70 10 chr15 84541864 84542679 -18952295 + RMER1A Other Other 1 864 -166 6 1230 433 111 220 11 chr15 84542681 84542772 -18952202 - B2_Mm2 SINE B2 0 195 86 6 1230 415 155 0 0 chr15 84542772 84542856 -18952118 + RMER1A Other Other 947 1030 0 6 1230 2612 170 73 23 chr15 84543330 84543811 -18951163 - RLTR18B LTR ERVK -4 508 4 7 1230 387 0 0 0 chr15 84543811 84543854 -18951120 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1230 1866 173 71 122 chr15 84544024 84544229 -18950745 + MTD LTR MaLR 5 209 -210 7 1230 1206 68 0 0 chr15 84544229 84544377 -18950597 + B1_Mus1 SINE Alu 1 148 0 7 1230 1866 173 71 122 chr15 84544377 84544606 -18950368 + MTD LTR MaLR 210 417 -2 7 1230 1050 220 205 3 chr15 84544669 84545015 -18949959 + RMER5 LTR ERV1 1 416 -118 7 1230 423 0 0 0 chr15 84545840 84545887 -18949087 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1230 1103 52 8 0 chr15 84545944 84546078 -18948896 + B1_Mus2 SINE Alu 2 136 -11 7 1230 315 0 0 0 chr15 84546081 84546116 -18948858 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 7 1230 1161 118 0 0 chr15 84546116 84546293 -18948681 + (GGAGA)n Simple_repeat Simple_repeat 1 178 0 7 1230 262 254 0 31 chr15 84546301 84546366 -18948608 + RSINE1 SINE B4 85 147 -18 7 1230 865 190 102 168 chr15 84546798 84546891 -18948083 + MT2A LTR ERVL 15 88 -445 8 1230 933 169 208 0 chr15 84546891 84547069 -18947905 - B3 SINE B2 0 216 2 8 1230 198 0 0 0 chr15 84547077 84547099 -18947875 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 8 1230 865 190 102 168 chr15 84547099 84547308 -18947666 + MT2A LTR ERVL 94 305 -228 8 1230 1137 99 0 17 chr15 84547308 84547469 -18947505 + B2_Mm2 SINE B2 2 159 -36 8 1230 243 0 0 0 chr15 84547469 84547496 -18947478 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 8 1230 1137 99 0 17 chr15 84547496 84547508 -18947466 + B2_Mm2 SINE B2 160 171 -24 8 1230 708 45 0 0 chr15 84547517 84547605 -18947369 + (GAA)n Simple_repeat Simple_repeat 3 90 0 8 1230 630 178 224 26 chr15 84547610 84547723 -18947251 + MT2A LTR ERVL 347 462 -71 8 1230 306 0 0 0 chr15 84547723 84547757 -18947217 + (TA)n Simple_repeat Simple_repeat 2 35 0 8 1230 630 178 224 26 chr15 84547757 84547799 -18947175 + MT2A LTR ERVL 463 533 0 8 1230 1179 69 0 6 chr15 84548115 84548275 -18946699 + B2_Mm1t SINE B2 2 160 -33 8 1230 396 40 0 0 chr15 84548275 84548325 -18946649 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 8 1230 414 0 0 0 chr15 84548371 84548417 -18946557 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 8 1230 294 214 14 0 chr15 84548622 84548692 -18946282 + MTEb LTR MaLR 39 109 -270 8 1230 825 221 37 33 chr15 84548867 84549082 -18945892 + B3 SINE B2 1 216 0 9 1230 609 278 80 15 chr15 84551683 84551884 -18943090 + ID_B1 SINE B4 9 222 -2 9 1230 456 183 10 31 chr15 84552056 84552152 -18942822 - PB1D10 SINE Alu 0 117 24 9 1230 182 325 24 48 chr15 84552294 84552378 -18942596 - MIR SINE MIR -65 197 116 9 1230 655 207 236 0 chr15 84552735 84552909 -18942065 + B3 SINE B2 2 216 0 9 1230 594 255 21 7 chr15 84552949 84552962 -18942012 - B3A SINE B2 -9 189 177 9 1230 447 19 0 0 chr15 84552962 84553014 -18941960 + (TG)n Simple_repeat Simple_repeat 1 52 0 9 1230 594 255 21 7 chr15 84553014 84553142 -18941832 - B3A SINE B2 -22 176 46 9 1230 272 272 75 110 chr15 84553075 84553302 -18941672 - MT2B LTR ERVL -204 397 179 9 1230 721 169 22 7 chr15 84553170 84553307 -18941667 - B1_Mur2 SINE Alu -2 147 9 9 1230 240 284 15 0 chr15 84554190 84554257 -18940717 + MIR SINE MIR 74 141 -121 9 1230 2271 85 3 0 chr15 84554265 84554583 -18940391 + ORR1A2 LTR MaLR 1 319 -8 1 1230 237 108 0 0 chr15 84555035 84555072 -18939902 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1230 319 318 102 54 chr15 84555113 84555544 -18939430 - L1M4b LINE L1 -5395 1939 1487 1 1230 204 40 0 0 chr15 84555544 84555569 -18939405 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 1 1230 305 305 70 56 chr15 84555569 84555602 -18939372 - L1M4b LINE L1 -3105 3898 3870 1 1230 471 18 0 0 chr15 84555634 84555690 -18939284 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1230 610 252 35 0 chr15 84555706 84555849 -18939125 - B3A SINE B2 -50 148 1 1 1230 31 26 0 0 chr15 84555866 84555904 -18939070 + AT_rich Low_complexity Low_complexity 1 38 0 1 1230 710 254 103 0 chr15 84555930 84556095 -18938879 - B3A SINE B2 -16 182 1 1 1230 559 138 119 0 chr15 84556111 84556220 -18938754 - B3 SINE B2 -4 212 91 1 1230 187 276 0 70 chr15 84556367 84556438 -18938536 - L2a LINE L2 -295 3080 3018 1 1230 1419 267 51 23 chr15 84556631 84556802 -18938172 + MTD LTR MaLR 13 177 -242 1 1230 1548 113 88 141 chr15 84556802 84557080 -18937894 + RMER17C LTR ERVK 1 234 -176 1 1230 1422 80 5 5 chr15 84557080 84557269 -18937705 - B2_Mm2 SINE B2 -6 189 1 1 1230 1548 113 88 141 chr15 84557269 84557423 -18937551 + RMER17C LTR ERVK 235 410 0 1 1230 1419 267 51 23 chr15 84557423 84557646 -18937328 + MTD LTR MaLR 178 418 -1 1 1230 672 268 108 32 chr15 84558882 84559133 -18935841 + B4A SINE B4 3 272 -20 1 1230 246 32 0 0 chr15 84559163 84559194 -18935780 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1230 310 156 30 30 chr15 84560837 84560903 -18934071 - PB1 SINE Alu -2 125 60 1 1230 212 54 0 51 chr15 84561025 84561064 -18933910 + (TTTTTG)n Simple_repeat Simple_repeat 4 40 0 1 1230 1155 43 35 0 chr15 84561073 84561214 -18933760 - B1_Mm SINE Alu -1 146 1 1 1230 600 77 0 0 chr15 84561281 84561372 -18933602 + (TC)n Simple_repeat Simple_repeat 2 92 0 1 1230 315 65 0 0 chr15 84561372 84561417 -18933557 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1230 872 181 0 13 chr15 84562007 84562158 -18932816 - B1_Mur1 SINE Alu 0 149 1 1 1230 921 259 55 53 chr15 84562254 84562585 -18932389 + Lx8 LINE L1 7125 7685 -11 1 1230 1309 52 0 6 chr15 84564192 84564366 -18930608 - B2_Mm2 SINE B2 -22 173 1 1 1230 738 163 14 36 chr15 84564411 84564551 -18930423 + B1_Mur4 SINE Alu 13 149 -1 1 1230 446 247 6 0 chr15 84564886 84565064 -18929910 + (TG)n Simple_repeat Simple_repeat 1 179 0 1 1230 896 225 46 0 chr15 84565064 84565237 -18929737 - B3A SINE B2 -16 182 2 1 1230 527 202 233 17 chr15 84565439 84565615 -18929359 - MTD LTR MaLR 0 419 206 1 1230 1783 204 88 5 chr15 84565739 84566211 -18928763 - MERVL_2A-int LTR ERVL -3191 2476 1941 1 1230 924 63 0 23 chr15 84566258 84566388 -18928586 - B1_Mus2 SINE Alu 0 147 21 1 1230 530 257 10 65 chr15 84566265 84566465 -18928509 - ID_B1 SINE B4 -4 220 32 1 1230 192 40 0 0 chr15 84567453 84567478 -18927496 + (G)n Simple_repeat Simple_repeat 1 25 0 1 1230 350 314 68 56 chr15 84567984 84568373 -18926601 - MLT1C LTR MaLR -12 455 6 1 1230 280 235 100 29 chr15 84568773 84568843 -18926131 + ID_B1 SINE B4 80 154 -70 1 1230 721 193 50 0 chr15 84568924 84569064 -18925910 - B1_Mus2 SINE Alu 0 147 1 1 1230 986 162 104 0 chr15 84569140 84569313 -18925661 + B2_Mm1t SINE B2 2 192 -1 1 1230 237 146 0 0 chr15 84569338 84569358 -18925616 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1230 1244 41 7 0 chr15 84569358 84569504 -18925470 + B1_Mm SINE Alu 1 147 0 1 1230 237 146 0 0 chr15 84569504 84569538 -18925436 + (A)n Simple_repeat Simple_repeat 1 34 0 1 1230 1105 157 91 0 chr15 84569580 84569777 -18925197 - B3 SINE B2 -1 215 1 1 1230 354 138 0 0 chr15 84569817 84569875 -18925099 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 1230 552 196 93 0 chr15 84569876 84569983 -18924991 - B1_Mm SINE Alu -30 117 1 1 1230 785 217 45 6 chr15 84570096 84570272 -18924702 - B3A SINE B2 -15 183 1 1 1230 803 255 99 24 chr15 84570359 84570612 -18924362 + B4A SINE B4 2 273 -19 1 1230 351 0 0 0 chr15 84570665 84570704 -18924270 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1230 333 0 0 0 chr15 84570704 84570740 -18924234 + (GA)n Simple_repeat Simple_repeat 1 37 0 1 1230 263 355 134 17 chr15 84571658 84571890 -18923084 - MLT1C LTR MaLR -5 462 204 1 1230 208 307 0 39 chr15 84572096 84572174 -18922800 + MIRc SINE MIR 74 148 -120 1 1230 521 161 244 8 chr15 84572671 84572790 -18922184 - B1F2 SINE Alu -1 148 2 1 1230 498 238 103 0 chr15 84573044 84573170 -18921804 + ID_B1 SINE B4 84 222 -2 1 1230 216 276 103 0 chr15 84573285 84573343 -18921631 + L3 LINE CR1 4301 4364 -125 1 1230 195 42 0 0 chr15 84573551 84573575 -18921399 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 1230 423 132 0 0 chr15 84573761 84573829 -18921145 + (TCCCC)n Simple_repeat Simple_repeat 1 68 0 1 1230 609 146 24 0 chr15 84574251 84574374 -18920600 + CT-rich Low_complexity Low_complexity 1 126 0 1 1230 733 175 33 65 chr15 84574407 84574560 -18920414 - B1_Mur3 SINE Alu -1 148 1 1 1230 231 224 43 29 chr15 84574735 84574804 -18920170 - L1MC3 LINE L1 -985 6800 6731 1 1230 1289 34 0 0 chr15 84575221 84575368 -18919606 + B1_Mus1 SINE Alu 2 148 0 1 1230 225 0 0 0 chr15 84575368 84575393 -18919581 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1230 396 55 0 0 chr15 84575598 84575653 -18919321 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1230 768 226 88 25 chr15 84575662 84575866 -18919108 - B4 SINE B4 -23 269 53 1 1230 680 217 13 40 chr15 84575908 84576057 -18918917 - B1_Mur1 SINE Alu -4 145 1 1 1230 239 390 94 10 chr15 84576682 84576874 -18918100 - MER77 LTR ERVL -252 355 148 1 1230 4542 10 2 0 chr15 84577002 84577494 -18917480 + MT2_Mm LTR ERVL 1 493 0 1 1230 39446 15 14 0 chr15 84577494 84582781 -18912193 + MERVL-int LTR ERVL 1 5360 -125 1 1230 374 167 46 35 chr15 84582781 84582868 -18912106 + ORR1A3-int LTR MaLR 553 640 -1323 1 1230 297 0 0 0 chr15 84582868 84582906 -18912068 + MERVL-int LTR ERVL 5448 5485 0 1 1230 4542 10 2 0 chr15 84582906 84583398 -18911576 + MT2_Mm LTR ERVL 1 493 0 1 1230 313 352 141 21 chr15 84584067 84584351 -18910623 + MLT1D LTR MaLR 10 327 -178 1 1230 309 51 0 0 chr15 84584595 84584634 -18910340 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1230 201 273 90 15 chr15 84584902 84584969 -18910005 - MIRc SINE MIR -146 122 51 1 1230 1141 265 48 17 chr15 84586139 84586497 -18908477 + MTE2b LTR MaLR 2 357 -22 1 1230 216 0 0 0 chr15 84586571 84586595 -18908379 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 1230 657 189 31 16 chr15 84586607 84586736 -18908238 - B1_Mur4 SINE Alu -9 141 11 1 1230 223 28 56 0 chr15 84586873 84586909 -18908065 + (CCCCCG)n Simple_repeat Simple_repeat 3 40 0 1 1230 342 305 103 26 chr15 84588291 84588486 -18906488 + MLT1D LTR MaLR 1 210 -295 1 1230 272 288 82 0 chr15 84589424 84589497 -18905477 + B4 SINE B4 127 205 -87 1 1230 1307 190 0 0 chr15 84589690 84589906 -18905068 - B3 SINE B2 0 216 1 1 1230 269 194 30 75 chr15 84590001 84590068 -18904906 - RMER15 LTR ERVL -154 421 358 1 1230 242 221 61 61 chr15 84590440 84590522 -18904452 + ID4_ SINE ID 2 83 0 1 1230 182 0 0 0 chr15 84591187 84591211 -18903763 + L2c LINE L2 3136 3159 -228 1 1230 314 325 33 13 chr15 84591567 84591720 -18903254 - L1M4 LINE L1 -390 5784 5629 1 1230 385 283 38 30 chr15 84591723 84591854 -18903120 - B4 SINE B4 -159 133 2 1 1230 336 267 67 0 chr15 84592245 84592350 -18902624 + MLT1A1 LTR MaLR 295 406 -2 1 1230 735 185 0 7 chr15 84592542 84592678 -18902296 + B1_Mur2 SINE Alu 15 149 0 1 1230 458 300 51 34 chr15 84592719 84592895 -18902079 - B3 SINE B2 -35 181 3 1 1230 186 216 50 75 chr15 84592928 84593008 -18901966 + MIRc SINE MIR 87 167 -101 1 1230 242 234 91 50 chr15 84594255 84594354 -18900620 - MIRb SINE MIR -80 188 86 1 1230 263 372 59 35 chr15 84595148 84595351 -18899623 - MLT1I LTR MaLR 0 411 204 1 1230 499 119 208 0 chr15 84595649 84595750 -18899224 - B1_Mus1 SINE Alu -2 146 25 1 1230 253 220 221 115 chr15 84595650 84595763 -18899211 - B4 SINE B4 -69 223 99 1 1230 180 321 0 0 chr15 84596493 84596546 -18898428 - MIR SINE MIR -148 114 62 1 1230 245 313 10 64 chr15 84598023 84598184 -18896790 + MIRc SINE MIR 38 187 -21 1 1230 4155 28 0 0 chr15 84598587 84599057 -18895917 - L1Md_T LINE L1 0 6582 6113 1 1230 963 122 21 28 chr15 84599263 84599407 -18895567 - B1_Mus1 SINE Alu -5 143 1 1 1230 502 243 10 0 chr15 84599479 84599582 -18895392 - PB1D10 SINE Alu -13 104 1 1 1230 850 212 147 0 chr15 84599625 84599809 -18895165 + ID_B1 SINE B4 5 215 -9 1 1230 394 329 40 7 chr15 84599944 84600094 -18894880 - MER58A DNA MER1_type -15 209 55 1 1230 215 274 0 0 chr15 84600094 84600156 -18894818 + ID_B1 SINE B4 79 140 -84 1 1230 774 272 63 67 chr15 84600856 84601140 -18893834 - B4A SINE B4 -3 289 7 1 1230 236 202 53 27 chr15 84601304 84601387 -18893587 + MIRb SINE MIR 96 184 -84 1 1230 336 342 77 45 chr15 84601779 84601935 -18893039 - RSINE1 SINE B4 -3 162 2 1 1230 231 139 47 0 chr15 84601935 84601975 -18892999 - B4 SINE B4 -66 226 185 1 1230 480 231 60 23 chr15 84603278 84603411 -18891563 - MLT1K LTR MaLR -317 278 141 1 1230 611 271 56 56 chr15 84603580 84603830 -18891144 - ORR1E LTR MaLR -95 264 15 1 1230 1289 213 142 3 chr15 84604200 84604525 -18890449 - MTD LTR MaLR -21 398 29 1 1230 736 168 5 38 chr15 84605261 84605447 -18889527 + CT-rich Low_complexity Low_complexity 1 180 0 2 1230 539 202 8 49 chr15 84605473 84605853 -18889121 + CT-rich Low_complexity Low_complexity 1 364 0 2 1230 710 245 0 37 chr15 84607118 84607279 -18887695 + RSINE1 SINE B4 11 165 0 2 1230 6409 55 30 2 chr15 84607281 84608067 -18886907 + RLTR13C2 LTR ERVK 1 808 0 2 1230 305 333 0 11 chr15 84608128 84608222 -18886752 + BC1_Mm scRNA scRNA 7 99 -53 2 1230 261 0 0 0 chr15 84608231 84608260 -18886714 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 1230 240 355 73 62 chr15 84608295 84608487 -18886487 + L1MD LINE L1 2634 2827 -3319 2 1230 21 0 0 0 chr15 84608527 84608548 -18886426 + AT_rich Low_complexity Low_complexity 1 21 0 2 1230 626 274 61 47 chr15 84608609 84608829 -18886145 - B3A SINE B2 -3 213 3 2 1230 398 279 115 0 chr15 84608831 84608953 -18886021 - B4 SINE B4 -66 226 91 2 1230 359 202 0 12 chr15 84608953 84609038 -18885936 + CT-rich Low_complexity Low_complexity 1 84 0 2 1230 406 218 0 33 chr15 84609038 84609128 -18885846 - B4 SINE B4 -205 87 1 2 1230 940 189 3 10 chr15 84609350 84609642 -18885332 + CT-rich Low_complexity Low_complexity 1 290 0 2 1230 386 280 120 0 chr15 84609653 84609778 -18885196 - B1_Mur2 SINE Alu -1 148 9 2 1230 1475 219 45 71 chr15 84609797 84610165 -18884809 - MTD LTR MaLR -15 404 47 2 1230 912 96 190 36 chr15 84610165 84610360 -18884614 - URR1B DNA MER1_type 0 225 1 2 1230 476 237 26 26 chr15 84610425 84610542 -18884432 + PB1D10 SINE Alu 1 117 0 2 1230 276 342 104 15 chr15 84610641 84610998 -18883976 + L1MC LINE L1 3170 3556 -2590 2 1230 227 328 82 0 chr15 84611154 84611288 -18883686 + L1MC LINE L1 3792 3936 -2210 2 1230 967 76 0 0 chr15 84611390 84611521 -18883453 - B1_Mus1 SINE Alu 0 148 18 2 1230 399 271 39 122 chr15 84611507 84611650 -18883324 + B3A SINE B2 23 164 -52 2 1230 578 14 14 0 chr15 84611650 84611721 -18883253 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 1230 351 331 21 21 chr15 84611721 84611755 -18883219 + B3 SINE B2 165 199 -17 2 1230 1050 291 166 26 chr15 84611762 84612214 -18882760 + MT2A LTR ERVL 15 529 -4 2 1230 571 174 8 94 chr15 84612349 84612476 -18882498 + PB1D9 SINE Alu 4 119 -1 2 1230 664 112 24 0 chr15 84612481 84612606 -18882368 + (GGAA)n Simple_repeat Simple_repeat 4 131 0 2 1230 281 304 58 10 chr15 84612806 84612909 -18882065 - LTR41B LTR ERVL -125 633 526 2 1230 559 172 86 0 chr15 84613022 84613138 -18881836 - B1_Mur2 SINE Alu -2 147 22 2 1230 991 251 14 14 chr15 84613172 84613394 -18881580 + ID_B1 SINE B4 3 224 0 2 1230 303 306 8 75 chr15 84613847 84613967 -18881007 + MTEb LTR MaLR 1 112 -267 2 1230 643 187 25 4 chr15 84614005 84614134 -18880840 + B3A SINE B2 3 136 -57 2 1230 291 28 0 0 chr15 84614134 84614170 -18880804 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1230 318 314 96 42 chr15 84614170 84614206 -18880768 + B2_Mm1a SINE B2 137 177 -16 2 1230 278 290 1 37 chr15 84614278 84614379 -18880595 + MTEb LTR MaLR 270 366 -13 2 1230 210 288 15 0 chr15 84614544 84614610 -18880364 - L2 LINE L2 -338 3081 3015 2 1230 195 42 0 0 chr15 84615917 84615941 -18879033 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1230 475 234 12 94 chr15 84618296 84618456 -18876518 + MT2A LTR ERVL 1 147 -386 2 1230 303 345 0 98 chr15 84618456 84618479 -18876495 + MTE2b LTR MaLR 1 165 -214 2 1230 4147 135 16 65 chr15 84618479 84619000 -18875974 + MERVL_2A-int LTR ERVL 4975 5486 -275 2 1230 1036 138 0 7 chr15 84619000 84619146 -18875828 + B1_Mus1 SINE Alu 2 146 -2 2 1230 4147 170 32 75 chr15 84619146 84619498 -18875476 + MERVL_2A-int LTR ERVL 5384 5714 0 2 1230 1290 188 85 66 chr15 84619498 84619900 -18875074 + MT2A LTR ERVL 1 543 -58 2 1230 324 0 0 0 chr15 84619900 84619936 -18875038 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 2 1230 943 218 45 108 chr15 84619936 84619970 -18875004 + MT2A LTR ERVL 535 566 -18 2 1230 1380 153 14 5 chr15 84619971 84620194 -18874780 + URR1B DNA MER1_type 1 225 0 2 1230 234 333 0 0 chr15 84620500 84620557 -18874417 + ID4_ SINE ID 25 81 -2 2 1230 425 283 29 14 chr15 84620650 84620790 -18874184 + HAL1-2a_MD LINE L1 2342 2483 -541 2 1230 272 239 45 0 chr15 84620800 84620867 -18874107 - MIRc SINE MIR -114 154 85 2 1230 189 0 0 0 chr15 84621052 84621073 -18873901 + (CA)n Simple_repeat Simple_repeat 1 21 0 2 1230 225 0 0 0 chr15 84621230 84621255 -18873719 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 1230 239 268 38 76 chr15 84623092 84623197 -18871777 - MIRc SINE MIR -144 124 24 2 1230 440 323 50 25 chr15 84623431 84623590 -18871384 + RSINE1 SINE B4 3 165 0 2 1230 381 253 44 138 chr15 84623830 84624215 -18870759 + L1M3e LINE L1 1105 1453 -5577 2 1230 352 289 20 10 chr15 84624922 84625020 -18869954 - PB1D7 SINE Alu 0 120 22 2 1230 480 77 0 0 chr15 84626270 84626335 -18868639 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 2 1230 1475 77 0 10 chr15 84626337 84626533 -18868441 - B2_Mm2 SINE B2 0 195 2 2 1230 1136 212 33 0 chr15 84626631 84626843 -18868131 - ID_B1 SINE B4 -3 221 3 2 1230 319 254 0 0 chr15 84627129 84627200 -18867774 + B3 SINE B2 2 72 -144 2 1230 393 247 45 0 chr15 84627452 84627541 -18867433 - PB1D10 SINE Alu -10 107 15 2 1230 1854 141 72 17 chr15 84627981 84628327 -18866647 + ORR1C2 LTR MaLR 20 384 0 2 1230 1027 50 0 14 chr15 84629879 84630020 -18864954 - B1_Mus1 SINE Alu 0 148 10 2 1230 438 324 7 22 chr15 84630004 84630143 -18864831 - MER2 DNA MER2_type -126 219 83 2 1230 384 301 31 82 chr15 84630240 84630399 -18864575 - MER2B DNA MER2_type -182 154 4 2 1230 403 301 23 0 chr15 84631135 84631268 -18863706 + B1F1 SINE Alu 2 137 -12 2 1230 872 246 14 33 chr15 84631897 84632111 -18862863 - ID_B1 SINE B4 -14 210 1 2 1230 1132 194 31 40 chr15 84633084 84633310 -18861664 + URR1B DNA MER1_type 2 225 0 2 1230 360 0 0 0 chr15 84634631 84634671 -18860303 + (TC)n Simple_repeat Simple_repeat 2 41 0 2 1230 240 279 19 52 chr15 84634855 84635010 -18859964 + (CTCA)n Simple_repeat Simple_repeat 4 153 0 2 1230 468 0 0 0 chr15 84638691 84638743 -18856231 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 1230 210 203 0 106 chr15 84638873 84638939 -18856035 - PB1D9 SINE Alu -35 85 27 2 1230 475 189 0 10 chr15 84638949 84639051 -18855923 + B1_Mur3 SINE Alu 9 106 -44 2 1230 220 228 0 17 chr15 84639116 84639174 -18855800 + B1F1 SINE Alu 93 149 0 2 1230 683 240 0 7 chr15 84639183 84639334 -18855640 + B4A SINE B4 82 231 -61 2 1230 396 0 0 0 chr15 84639357 84639401 -18855573 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1230 369 0 0 0 chr15 84640720 84640761 -18854213 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1230 1132 171 9 23 chr15 84642010 84642225 -18852749 - URR1B DNA MER1_type -11 214 3 2 1230 389 288 42 104 chr15 84642225 84642273 -18852701 + CYRA11_Mm Unknown Y-chromosome 397 428 -189 2 1230 1424 99 5 0 chr15 84644277 84644468 -18850506 - B2_Mm1t SINE B2 -1 192 1 2 1230 191 289 0 84 chr15 84644671 84644754 -18850220 - L2c LINE L2 -203 3184 3109 2 1230 1535 131 5 5 chr15 84646885 84647108 -18847866 - URR1B DNA MER1_type -1 224 2 2 1230 264 368 0 17 chr15 84647715 84647834 -18847140 + PB1 SINE Alu 2 118 -9 2 1230 315 0 0 0 chr15 84647834 84647869 -18847105 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1230 212 329 14 0 chr15 84647872 84647942 -18847032 + GA-rich Low_complexity Low_complexity 1 71 0 2 1230 237 292 93 19 chr15 84648696 84648804 -18846170 + MIRb SINE MIR 92 207 -61 2 1230 422 256 112 25 chr15 84649424 84649584 -18845390 + MER33 DNA MER1_type 77 250 -74 2 1230 596 269 17 33 chr15 84649590 84649793 -18845181 + L1ME2 LINE L1 5997 6194 -250 2 1230 233 179 0 0 chr15 84651746 84651785 -18843189 - MIRm SINE MIR -123 153 115 2 1230 596 156 191 32 chr15 84652941 84653067 -18841907 + B1_Mur4 SINE Alu 5 150 0 2 1230 320 270 155 4 chr15 84653111 84653277 -18841697 + MTEb LTR MaLR 176 372 -7 2 1230 309 149 0 0 chr15 84653281 84653328 -18841646 - B1F1 SINE Alu -101 48 2 2 1230 285 226 0 0 chr15 84653283 84653336 -18841638 - B4A SINE B4 -161 131 79 2 1230 2020 89 32 0 chr15 84653362 84653644 -18841330 + L1_Mur2 LINE L1 5488 5778 -99 2 1230 824 204 121 22 chr15 84653644 84653875 -18841099 - MTD LTR MaLR -157 262 9 2 1230 1689 22 0 0 chr15 84654277 84654462 -18840512 - B2_Mm1t SINE B2 -7 186 2 2 1230 1219 167 40 28 chr15 84655998 84656250 -18838724 + ORR1D1 LTR MaLR 6 260 -114 2 1230 2669 117 266 2 chr15 84657105 84657568 -18837406 + RMER4B LTR ERVK 1 585 0 2 1230 312 293 204 26 chr15 84657947 84658217 -18836757 + L1MCb LINE L1 46 363 -5682 2 1230 359 333 36 109 chr15 84658219 84658357 -18836617 + RSINE1 SINE B4 2 129 -36 2 1230 302 217 58 0 chr15 84658414 84658483 -18836491 + L1MCb LINE L1 631 703 -6048 2 1230 425 19 19 0 chr15 84659490 84659544 -18835430 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 1230 435 328 67 102 chr15 84660528 84660752 -18834222 - MLT2B3 LTR ERVL -167 387 1 2 1230 471 219 23 147 chr15 84660752 84660929 -18834045 - MTEa LTR MaLR -224 155 1 2 1230 342 0 0 0 chr15 84660990 84661028 -18833946 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1230 246 220 0 0 chr15 84661035 84661085 -18833889 - L1MB5 LINE L1 -61 6113 6064 2 1230 204 183 56 14 chr15 84662394 84662466 -18832508 + GA-rich Low_complexity Low_complexity 1 75 0 2 1230 194 343 75 38 chr15 84663489 84663595 -18831379 - MIRc SINE MIR -120 148 39 2 1230 414 0 0 0 chr15 84664168 84664214 -18830760 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1230 432 0 0 0 chr15 84664725 84664773 -18830201 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 1230 298 111 0 0 chr15 84664773 84664818 -18830156 + MT2A LTR ERVL 489 533 0 2 1230 505 265 35 50 chr15 84664969 84665168 -18829806 + HAL1-2a_MD LINE L1 2330 2525 -499 3 1230 316 285 83 60 chr15 84665168 84665336 -18829638 + HAL1-2a_MD LINE L1 2354 2525 -499 3 1230 1131 65 0 0 chr15 84665720 84665873 -18829101 + B2_Mm2 SINE B2 1 153 -42 3 1230 405 0 0 0 chr15 84665873 84665918 -18829056 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 1230 455 292 6 64 chr15 84666851 84667023 -18827951 + HAL1-2a_MD LINE L1 2345 2506 -518 3 1230 375 283 33 0 chr15 84667028 84667148 -18827826 + (CACCAT)n Simple_repeat Simple_repeat 6 129 0 3 1230 229 309 112 28 chr15 84667909 84668052 -18826922 - MIRb SINE MIR -34 234 80 3 1230 879 164 0 52 chr15 84668780 84668934 -18826040 - B1_Mur4 SINE Alu -3 147 2 3 1230 303 290 18 53 chr15 84669123 84669236 -18825738 + ID_B1 SINE B4 116 224 0 3 1230 647 110 0 20 chr15 84669136 84669238 -18825736 + B1_Mur4 SINE Alu 51 150 0 3 1230 989 162 30 1 chr15 84669241 84669307 -18825667 + polypurine Low_complexity Low_complexity 1 67 0 3 1230 1079 129 0 6 chr15 84669307 84669486 -18825488 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 3 1230 989 150 0 6 chr15 84669486 84669648 -18825326 + GA-rich Low_complexity Low_complexity 19 180 0 3 1231 3382 40 2 17 chr15 84674582 84674988 -18819986 + MTB LTR MaLR 1 400 0 3 1231 202 323 0 15 chr15 84675459 84675525 -18819449 + CT-rich Low_complexity Low_complexity 3 67 0 3 1231 609 188 22 32 chr15 84676407 84676546 -18818428 + B1_Mur2 SINE Alu 1 135 -12 3 1231 522 0 0 0 chr15 84676546 84676604 -18818370 + (GAAA)n Simple_repeat Simple_repeat 1 58 0 3 1231 554 82 30 10 chr15 84676610 84676709 -18818265 + (AGGGGG)n Simple_repeat Simple_repeat 2 102 0 3 1231 270 0 0 0 chr15 84677582 84677612 -18817362 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 1231 238 322 41 41 chr15 84677653 84677776 -18817198 + MIR SINE MIR 70 192 -70 3 1231 2246 107 31 12 chr15 84679158 84679479 -18815495 - ORR1A2 LTR MaLR 0 327 1 3 1231 207 0 0 0 chr15 84679825 84679848 -18815126 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 3 1231 283 170 0 0 chr15 84680001 84680048 -18814926 + PB1D9 SINE Alu 68 114 -6 3 1231 411 351 89 6 chr15 84680135 84680304 -18814670 + B3 SINE B2 1 183 -33 3 1231 542 229 0 9 chr15 84680325 84680435 -18814539 + B3A SINE B2 1 109 -89 3 1231 283 239 15 0 chr15 84681096 84681163 -18813811 + L1M5 LINE L1 5722 5789 -390 3 1231 23 0 0 0 chr15 84684320 84684343 -18810631 + GC_rich Low_complexity Low_complexity 1 23 0 3 1231 31 68 0 0 chr15 84684386 84684445 -18810529 + GC_rich Low_complexity Low_complexity 1 59 0 3 1231 22 0 0 0 chr15 84685265 84685287 -18809687 + GC_rich Low_complexity Low_complexity 1 22 0 3 1231 30 45 0 0 chr15 84685448 84685492 -18809482 + GC_rich Low_complexity Low_complexity 1 44 0 3 1231 23 110 0 0 chr15 84686358 84686458 -18808516 + GC_rich Low_complexity Low_complexity 1 100 0 3 1231 210 37 0 0 chr15 84686610 84686637 -18808337 + (CCCCG)n Simple_repeat Simple_repeat 2 28 0 3 1231 252 0 0 0 chr15 84687495 84687523 -18807451 + (TC)n Simple_repeat Simple_repeat 1 28 0 3 1231 225 0 0 0 chr15 84687523 84687547 -18807427 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 1231 379 200 0 0 chr15 84688193 84688258 -18806716 - ID2 SINE ID -16 67 3 3 1231 228 196 98 0 chr15 84688274 84688325 -18806649 - PB1 SINE Alu -53 74 19 3 1231 1074 255 125 6 chr15 84688793 84689105 -18805869 - ORR1D2 LTR MaLR -1 369 21 3 1231 252 300 57 0 chr15 84689408 84689478 -18805496 + MER21B LTR ERV1 15 88 -775 3 1231 538 261 13 7 chr15 84689781 84689942 -18805032 - L1MA4 LINE L1 -423 5877 5685 3 1231 2168 150 6 0 chr15 84689959 84690286 -18804688 - ORR1A4 LTR MaLR 0 329 1 3 1231 180 200 0 0 chr15 84690777 84690812 -18804162 + L3b LINE CR1 439 473 -9 3 1231 1289 144 0 14 chr15 84690812 84691030 -18803944 - URR1B DNA MER1_type 0 225 11 3 1231 284 297 89 0 chr15 84691041 84691142 -18803832 - ID_B1 SINE B4 -112 112 3 3 1231 215 192 61 45 chr15 84691494 84691589 -18803385 - MIR SINE MIR -129 139 33 3 1231 1051 109 0 0 chr15 84692736 84692874 -18802100 + B1_Mus1 SINE Alu 1 138 -10 3 1231 279 0 0 0 chr15 84692874 84692905 -18802069 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1231 429 219 0 0 chr15 84692906 84693025 -18801949 + (TG)n Simple_repeat Simple_repeat 1 119 0 3 1231 630 255 12 42 chr15 84693057 84693225 -18801749 - RSINE1 SINE B4 0 165 3 3 1231 239 348 64 14 chr15 84693559 84693699 -18801275 - MIRc SINE MIR -72 196 50 3 1231 183 80 0 0 chr15 84693724 84693749 -18801225 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 3 1231 1304 97 43 5 chr15 84693756 84693943 -18801031 - B2_Mm2 SINE B2 0 195 2 3 1231 1611 180 14 0 chr15 84693970 84694264 -18800710 - MTC LTR MaLR -123 298 1 3 1231 26 0 0 0 chr15 84694549 84694575 -18800399 + AT_rich Low_complexity Low_complexity 1 26 0 3 1231 1672 214 60 13 chr15 84694701 84695098 -18799876 - MTD LTR MaLR -14 405 5 3 1231 1570 38 0 21 chr15 84695943 84696130 -18798844 - B2_Mm1a SINE B2 -9 184 2 3 1231 295 197 41 27 chr15 84696131 84696204 -18798770 + ORR1D1 LTR MaLR 301 374 0 3 1231 252 298 80 8 chr15 84696227 84696352 -18798622 + MTEb-int LTR MaLR 1445 1578 -2 3 1231 1090 220 209 49 chr15 84696354 84696679 -18798295 + MTEb LTR MaLR 1 377 -2 3 1231 726 12 0 0 chr15 84697947 84698030 -18796944 + (GAAA)n Simple_repeat Simple_repeat 4 86 0 3 1231 233 349 23 11 chr15 84698062 84698149 -18796825 - MIR3 SINE MIR -21 187 100 3 1231 3327 58 0 2 chr15 84698446 84698847 -18796127 + MTB LTR MaLR 1 400 0 3 1231 1187 62 0 7 chr15 84698990 84699137 -18795837 + B1_Mus2 SINE Alu 2 147 0 3 1231 350 74 19 0 chr15 84699141 84699195 -18795779 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 3 1231 275 308 187 27 chr15 84699647 84699904 -18795070 + MLT1D LTR MaLR 53 350 -155 3 1231 1286 85 62 0 chr15 84699960 84700136 -18794838 - B2_Mm2 SINE B2 -7 188 2 3 1231 2110 139 30 73 chr15 84700432 84700491 -18794483 + MTC LTR MaLR 5 54 -367 3 1231 1376 78 5 22 chr15 84700491 84700675 -18794299 + B2_Mm2 SINE B2 1 181 -14 3 1231 2110 139 30 73 chr15 84700675 84700932 -18794042 + MTC LTR MaLR 55 312 -109 3 1231 2281 102 12 64 chr15 84700932 84701277 -18793697 - ORR1A2 LTR MaLR 0 327 1 3 1231 2110 139 30 73 chr15 84701277 84701386 -18793588 + MTC LTR MaLR 313 413 -8 3 1231 231 338 13 0 chr15 84701393 84701470 -18793504 + MIR SINE MIR 80 157 -105 3 1231 2146 134 66 9 chr15 84702668 84703015 -18791959 + ORR1B2 LTR MaLR 1 367 0 3 1231 679 181 0 45 chr15 84703876 84704009 -18790965 + B1_Mur3 SINE Alu 3 129 -20 3 1231 235 305 40 50 chr15 84703929 84704029 -18790945 + RLTR25A LTR ERVK 526 624 -479 3 1231 1422 66 38 5 chr15 84704034 84704218 -18790756 - B2_Mm2 SINE B2 -4 191 2 3 1231 486 0 0 0 chr15 84704272 84704326 -18790648 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 1231 540 179 0 36 chr15 84704711 84704821 -18790153 + B4A SINE B4 183 288 -4 3 1231 2483 173 85 28 chr15 84705702 84706232 -18788742 + ORR1D1-int LTR MaLR 809 1368 -2 3 1231 933 202 232 11 chr15 84706238 84706380 -18788594 + ORR1D1 LTR MaLR 6 188 -186 3 1231 270 0 0 0 chr15 84706380 84706410 -18788564 + (TC)n Simple_repeat Simple_repeat 2 31 0 3 1231 933 202 232 11 chr15 84706410 84706547 -18788427 + ORR1D1 LTR MaLR 189 347 -27 3 1231 375 367 64 53 chr15 84706844 84707031 -18787943 - B3 SINE B2 -1 215 27 3 1231 1271 75 0 6 chr15 84707048 84707223 -18787751 - B2_Mm2 SINE B2 -20 175 2 3 1231 294 348 137 31 chr15 84707223 84707461 -18787513 - Tigger15a DNA TcMar -449 266 2 3 1231 1415 191 270 36 chr15 84707830 84708275 -18786699 - RMER15 LTR ERVL 0 575 27 3 1231 1196 141 126 0 chr15 84708288 84708486 -18786488 + URR1A DNA MER1_type 1 223 -3 3 1231 632 173 22 29 chr15 84708582 84708719 -18786255 + B1_Mur1 SINE Alu 11 146 -3 3 1231 324 261 48 130 chr15 84708719 84708783 -18786191 + MT2B LTR ERVL 182 357 -244 3 1231 3503 124 12 2 chr15 84708790 84709284 -18785690 - RLTR19 LTR ERVK 0 499 1 3 1231 364 319 92 0 chr15 84709965 84710084 -18784890 + RSINE1 SINE B4 2 131 -34 3 1231 316 149 13 39 chr15 84710124 84710201 -18784773 - B3 SINE B2 -6 210 136 3 1231 738 156 0 0 chr15 84710422 84710636 -18784338 + (CA)n Simple_repeat Simple_repeat 1 214 0 3 1231 240 111 0 0 chr15 84710764 84710800 -18784174 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 1231 950 233 4 81 chr15 84710817 84711051 -18783923 - B3 SINE B2 0 216 1 3 1231 709 250 0 7 chr15 84711055 84711200 -18783774 - B1F SINE Alu -1 148 5 3 1231 432 0 0 0 chr15 84711231 84711279 -18783695 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1231 256 296 0 0 chr15 84711323 84711377 -18783597 - B4 SINE B4 -4 288 235 3 1231 778 272 49 13 chr15 84711395 84711643 -18783331 - B4 SINE B4 -32 260 8 3 1231 3127 60 39 0 chr15 84711727 84712112 -18782862 + MTB LTR MaLR 1 400 0 3 1231 216 249 0 0 chr15 84712266 84712320 -18782654 - MIRc SINE MIR -151 125 72 3 1231 270 0 0 0 chr15 84712548 84712578 -18782396 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 3 1231 264 266 171 18 chr15 84712941 84713052 -18781922 - MER20 DNA MER1_type -87 132 5 3 1231 1081 282 113 0 chr15 84713138 84713316 -18781658 - MTEa LTR MaLR 0 379 169 3 1231 1136 109 6 0 chr15 84713316 84713491 -18781483 + (TTC)n Simple_repeat Simple_repeat 2 177 0 3 1231 1081 282 113 0 chr15 84713491 84713649 -18781325 - MTEa LTR MaLR -211 168 6 3 1231 634 238 0 31 chr15 84713654 84713784 -18781190 + B1_Mur1 SINE Alu 2 127 -22 3 1231 582 164 0 0 chr15 84713786 84713932 -18781042 + GA-rich Low_complexity Low_complexity 1 146 0 3 1231 215 278 153 0 chr15 84714006 84714078 -18780896 + ID4_ SINE ID 1 83 0 4 1231 243 243 12 129 chr15 84714873 84714958 -18780016 + ID4 SINE ID 5 79 -4 4 1231 751 238 36 76 chr15 84714983 84715046 -18779928 - B4 SINE B4 -10 282 224 4 1231 198 0 0 0 chr15 84715046 84715068 -18779906 + (TTGG)n Simple_repeat Simple_repeat 1 22 0 4 1231 751 238 36 76 chr15 84715068 84715210 -18779764 - B4 SINE B4 -69 223 86 4 1231 427 238 139 44 chr15 84715210 84715386 -18779588 + MTD LTR MaLR 1 164 -215 4 1231 240 185 37 0 chr15 84715359 84715413 -18779561 + MTD LTR MaLR 273 328 -51 4 1231 290 235 103 0 chr15 84715824 84715892 -18779082 - B3 SINE B2 -7 209 135 4 1231 362 127 7 257 chr15 84715851 84715999 -18778975 - B1_Mur4 SINE Alu -20 130 20 4 1231 301 347 27 20 chr15 84716561 84716708 -18778266 + MER53 DNA hAT 25 172 -21 4 1231 550 185 40 48 chr15 84716690 84716815 -18778159 + B1_Mur4 SINE Alu 25 148 -2 4 1231 332 281 0 22 chr15 84716930 84717021 -18777953 - B4 SINE B4 -4 288 200 4 1231 1307 91 17 0 chr15 84717021 84717196 -18777778 + B2_Mm1t SINE B2 2 179 -14 4 1231 362 73 0 52 chr15 84717242 84717300 -18777674 + B2_Mm2 SINE B2 47 101 -94 4 1231 24 0 0 0 chr15 84717322 84717346 -18777628 + AT_rich Low_complexity Low_complexity 1 24 0 4 1231 832 235 19 34 chr15 84717353 84717560 -18777414 - B4A SINE B4 -87 205 2 4 1231 786 185 52 52 chr15 84717572 84717766 -18777208 - B2_Mm2 SINE B2 0 195 2 4 1231 696 286 5 48 chr15 84717903 84718109 -18776865 - B3A SINE B2 0 198 2 4 1231 839 175 0 27 chr15 84718204 84718351 -18776623 + B1F SINE Alu 1 143 -6 4 1231 1077 243 5 5 chr15 84718360 84718575 -18776399 + B3 SINE B2 2 216 0 4 1231 259 340 0 19 chr15 84719305 84719413 -18775561 + (CA)n Simple_repeat Simple_repeat 1 106 0 4 1231 277 282 59 0 chr15 84719869 84719954 -18775020 + ORR1E LTR MaLR 270 359 0 4 1231 370 281 37 0 chr15 84720022 84720148 -18774826 + L1M5 LINE L1 5669 5803 -376 4 1231 1260 35 0 0 chr15 84720416 84720560 -18774414 + B1_Mus1 SINE Alu 5 148 0 4 1231 314 287 74 0 chr15 84720568 84720676 -18774298 + PB1D10 SINE Alu 1 116 -1 4 1231 2221 91 0 9 chr15 84720708 84721030 -18773944 + ORR1A2 LTR MaLR 1 319 -8 4 1231 345 162 0 0 chr15 84721067 84721135 -18773839 + (TG)n Simple_repeat Simple_repeat 2 69 0 4 1231 711 247 171 21 chr15 84721161 84721401 -18773573 - B4A SINE B4 -14 278 3 4 1231 590 281 29 29 chr15 84721713 84721885 -18773089 + MLT1A LTR MaLR 2 173 -201 4 1231 342 0 0 0 chr15 84721903 84721941 -18773033 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1231 608 224 159 14 chr15 84722515 84722723 -18772251 + L1MB4 LINE L1 5700 5937 -243 4 1231 295 163 20 0 chr15 84722743 84722792 -18772182 + ID4_ SINE ID 34 83 0 4 1231 360 274 87 16 chr15 84723092 84723218 -18771756 + MLT1A LTR MaLR 270 404 -4 4 1231 374 316 73 90 chr15 84723294 84723784 -18771190 + L1MC5 LINE L1 6697 7108 -853 4 1231 766 186 112 58 chr15 84723800 84723988 -18770986 - B3A SINE B2 0 198 1 4 1231 2950 118 51 11 chr15 84724059 84724532 -18770442 - RLTR44C LTR ERVK -10 492 1 4 1231 4985 30 2 0 chr15 84724532 84725100 -18769874 - RLTR44-int LTR ERVK 0 2812 2244 4 1231 604 282 34 63 chr15 84725111 84725380 -18769594 - IAPEz-int LTR ERVK -2798 3683 3423 4 1231 282 29 0 0 chr15 84725384 84725419 -18769555 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1231 1243 7 0 0 chr15 84725419 84725556 -18769418 - B1_Mus2 SINE Alu -9 138 2 4 1231 2225 141 36 23 chr15 84725648 84726273 -18768701 - RLTR44-int LTR ERVK -1480 1332 816 4 1231 942 111 7 0 chr15 84726293 84726428 -18768546 - RLTR44-int LTR ERVK -2666 146 11 4 1231 3069 95 42 10 chr15 84726428 84726909 -18768065 - RLTR44C LTR ERVK -6 496 1 4 1231 258 257 133 13 chr15 84727005 84727080 -18767894 + B4A SINE B4 63 146 -146 4 1231 281 281 0 0 chr15 84727025 84727082 -18767892 + PB1D7 SINE Alu 7 63 -57 4 1231 1727 101 165 29 chr15 84727104 84727420 -18767554 - ORR1B2 LTR MaLR -8 359 1 4 1231 1100 156 48 11 chr15 84727420 84727574 -18767400 + RMER19B LTR ERVK 742 902 0 4 1231 1244 107 17 0 chr15 84728099 84728276 -18766698 + B2_Mm2 SINE B2 2 181 -14 4 1231 180 356 38 82 chr15 84728287 84728446 -18766528 + MIR SINE MIR 110 261 -1 4 1231 1126 66 0 0 chr15 84729813 84729949 -18765025 + B1_Mus2 SINE Alu 5 140 -7 4 1231 423 205 23 46 chr15 84730013 84730100 -18764874 - RSINE1 SINE B4 -50 115 31 4 1231 659 250 89 16 chr15 84730143 84730334 -18764640 + B4 SINE B4 8 212 -80 4 1231 336 48 0 0 chr15 84730420 84730462 -18764512 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1231 282 273 26 13 chr15 84730824 84730902 -18764072 + MLT1K LTR MaLR 350 428 -167 4 1231 1739 113 271 0 chr15 84731524 84731834 -18763140 + ORR1B1 LTR MaLR 1 394 0 4 1231 221 285 0 8 chr15 84731911 84732042 -18762932 + (CA)n Simple_repeat Simple_repeat 1 130 0 4 1231 1262 99 16 11 chr15 84733164 84733188 -18761786 - B2_Mm2 SINE B2 -10 185 159 4 1231 243 0 0 0 chr15 84733188 84733215 -18761759 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 4 1231 1262 99 16 11 chr15 84733215 84733373 -18761601 - B2_Mm2 SINE B2 -37 158 2 4 1231 306 0 0 0 chr15 84733389 84733423 -18761551 + (GA)n Simple_repeat Simple_repeat 1 34 0 4 1231 284 174 0 0 chr15 84733426 84733472 -18761502 - RSINE1 SINE B4 -114 51 6 4 1231 781 162 30 23 chr15 84733568 84733701 -18761273 - B1_Mur4 SINE Alu -16 134 1 4 1231 341 115 0 0 chr15 84733796 84733848 -18761126 - RMER19B LTR ERVK -77 825 774 4 1231 415 333 17 90 chr15 84733914 84734092 -18760882 + B4A SINE B4 118 282 -10 4 1231 278 238 80 106 chr15 84734166 84734354 -18760620 + L1MB4 LINE L1 5944 6126 -54 4 1231 1301 283 57 47 chr15 84734391 84734950 -18760024 + L1M4 LINE L1 3626 4190 -1956 4 1231 340 349 15 0 chr15 84735053 84735185 -18759789 + L1M4 LINE L1 4357 4490 -1656 4 1231 375 285 144 46 chr15 84735157 84735194 -18759780 + L1MEe LINE L1 794 825 -2199 4 1231 640 196 119 8 chr15 84735194 84735328 -18759646 + B1_Mur1 SINE Alu 1 149 0 4 1231 376 268 178 9 chr15 84735328 84735608 -18759366 + L1MEe LINE L1 2015 2214 -3952 4 1231 1070 224 56 56 chr15 84735799 84735941 -18759033 + B4A SINE B4 1 132 -160 4 1231 378 0 0 0 chr15 84735941 84735983 -18758991 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1231 1070 224 56 56 chr15 84735983 84736110 -18758864 + B4A SINE B4 133 270 -22 4 1231 441 0 0 0 chr15 84736111 84736160 -18758814 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1231 850 145 20 27 chr15 84736232 84736381 -18758593 - B1_Mur3 SINE Alu 0 149 2 4 1231 204 322 0 0 chr15 84736973 84737032 -18757942 + C-rich Low_complexity Low_complexity 1 59 0 4 1231 235 326 0 34 chr15 84737400 84737431 -18757543 + ID_B1 SINE B4 66 151 -73 4 1231 287 224 35 0 chr15 84737431 84737489 -18757485 + PB1 SINE Alu 14 73 -54 4 1231 4819 209 38 41 chr15 84737509 84737552 -18757422 - Lx6 LINE L1 -1 7459 7421 4 1231 4560 62 14 9 chr15 84737552 84738133 -18756841 + MT2B2 LTR ERVL 1 584 0 4 1231 4819 209 38 41 chr15 84738133 84739159 -18755815 - Lx6 LINE L1 -40 7420 6393 4 1231 421 306 49 69 chr15 84739261 84739325 -18755649 + B4A SINE B4 32 95 -197 4 1231 1556 38 5 0 chr15 84739325 84739509 -18755465 + B2_Mm1a SINE B2 2 186 -7 4 1231 421 306 49 69 chr15 84739509 84739588 -18755386 + B4A SINE B4 96 172 -120 4 1231 284 211 0 19 chr15 84739637 84739690 -18755284 + B4A SINE B4 183 234 -58 4 1231 953 189 71 5 chr15 84739941 84740138 -18754836 - B3 SINE B2 -6 210 1 4 1231 1294 98 6 0 chr15 84740365 84740538 -18754436 + B2_Mm1t SINE B2 2 175 -18 4 1231 1655 31 5 0 chr15 84740866 84741057 -18753917 + B2_Mm1a SINE B2 1 192 -1 4 1231 1495 189 129 25 chr15 84741178 84741503 -18753471 - ORR1D2 LTR MaLR -10 360 2 4 1231 418 304 75 0 chr15 84741533 84741694 -18753280 - MER63A DNA AcHobo -1 209 37 4 1231 229 260 92 106 chr15 84741981 84742018 -18752956 + MamRep605 Unknown Unknown 470 506 -370 4 1231 2071 200 43 159 chr15 84742018 84742709 -18752265 + RMER19C LTR ERVK 1 611 0 4 1231 229 260 92 106 chr15 84742709 84742813 -18752161 + MamRep605 Unknown Unknown 507 609 -267 4 1231 3057 20 9 0 chr15 84743051 84743394 -18751580 - ORR1A0 LTR MaLR 0 346 1 4 1231 888 239 18 14 chr15 84744213 84744434 -18750540 - ID_B1 SINE B4 -1 223 2 4 1231 502 230 140 28 chr15 84744878 84745021 -18749953 - RSINE1 SINE B4 -4 161 3 4 1231 935 194 60 51 chr15 84745023 84745240 -18749734 - B4A SINE B4 -71 221 3 4 1231 1629 295 111 23 chr15 84745457 84746157 -18748817 - Lx8 LINE L1 -244 7229 6468 4 1231 2439 82 3 0 chr15 84746245 84746563 -18748411 - ORR1A2 LTR MaLR -8 319 1 4 1231 1143 267 104 49 chr15 84746905 84747378 -18747596 + ERVL-B4-int LTR ERVL 4734 5232 -482 4 1231 747 251 171 58 chr15 84747454 84747763 -18747211 - MLT2D LTR ERVL -51 363 20 4 1231 1680 21 0 5 chr15 84747978 84748171 -18746803 - B2_Mm1a SINE B2 0 193 2 4 1231 326 221 64 13 chr15 84749057 84749135 -18745839 + RMER30 DNA MER1_type 7 88 -114 4 1231 1447 249 104 32 chr15 84749332 84749589 -18745385 - MT2A LTR ERVL -8 525 229 4 1231 369 0 0 0 chr15 84749589 84749630 -18745344 + (CAG)n Simple_repeat Simple_repeat 2 42 0 4 1231 1447 249 104 32 chr15 84749630 84749804 -18745170 - MT2A LTR ERVL -305 228 63 4 1231 264 322 39 65 chr15 84749723 84749876 -18745098 - MTD LTR MaLR -253 166 18 4 1231 307 259 41 82 chr15 84749864 84749986 -18744988 - MTD-int LTR MaLR -12 1568 1452 4 1231 984 208 59 10 chr15 84749990 84750194 -18744780 + B3 SINE B2 2 215 -1 4 1231 402 244 144 0 chr15 84750254 84750344 -18744630 + B3 SINE B2 107 209 -7 4 1231 332 333 22 52 chr15 84750442 84750578 -18744396 - MTD-int LTR MaLR -293 1287 1156 4 1231 190 29 88 0 chr15 84750689 84750723 -18744251 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 4 1231 1236 40 0 0 chr15 84750728 84750876 -18744098 + B1_Mus1 SINE Alu 1 148 0 4 1231 1510 164 64 49 chr15 84750890 84751217 -18743757 - MERVL_2A-int LTR ERVL -242 5519 5188 4 1231 1266 181 182 27 chr15 84751355 84751684 -18743290 - RLTR14 LTR ERV1 0 382 3 4 1231 445 236 67 0 chr15 84751686 84751775 -18743199 - B3 SINE B2 -119 97 3 4 1231 275 269 145 111 chr15 84752010 84752127 -18742847 - ID_B1 SINE B4 -102 122 2 4 1231 515 197 74 74 chr15 84752166 84752314 -18742660 - B1_Mur2 SINE Alu 0 149 2 4 1231 337 288 7 88 chr15 84752327 84752464 -18742510 - ID_B1 SINE B4 0 224 99 4 1231 258 178 204 5 chr15 84752477 84752572 -18742402 - PB1 SINE Alu -16 111 1 5 1231 267 309 0 24 chr15 84752758 84752841 -18742133 - BC1_Mm scRNA scRNA -58 94 14 5 1231 233 258 15 46 chr15 84752786 84752851 -18742123 - ID SINE ID -155 69 7 4 1231 279 0 0 0 chr15 84754507 84754538 -18740436 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 1231 236 259 69 0 chr15 84754714 84754772 -18740202 + ID SINE ID 22 83 -141 5 1231 302 224 90 26 chr15 84754920 84754998 -18739976 - B1F1 SINE Alu -27 122 40 5 1231 657 63 0 0 chr15 84756101 84756196 -18738778 + (TC)n Simple_repeat Simple_repeat 2 96 0 5 1231 669 234 43 37 chr15 84756196 84756360 -18738614 - B3A SINE B2 -33 165 1 5 1231 931 176 0 0 chr15 84756389 84756537 -18738437 - B1_Mur3 SINE Alu -1 148 1 5 1231 186 227 0 0 chr15 84756542 84756586 -18738388 + (CTA)n Simple_repeat Simple_repeat 1 44 0 5 1231 464 302 33 26 chr15 84756590 84756743 -18738231 - B3 SINE B2 -60 156 3 5 1231 458 106 75 140 chr15 84757001 84757187 -18737787 + RMER17C LTR ERVK 101 274 -136 5 1231 30 59 0 0 chr15 84757522 84757573 -18737401 + AT_rich Low_complexity Low_complexity 1 51 0 5 1231 1407 70 32 0 chr15 84758601 84758788 -18736186 - B2_Mm1t SINE B2 0 193 1 5 1231 437 289 97 51 chr15 84760174 84760349 -18734625 - RMER30 DNA MER1_type -19 183 1 5 1231 329 165 235 0 chr15 84760546 84760631 -18734343 + PB1D9 SINE Alu 3 107 -13 5 1231 757 149 40 47 chr15 84760805 84760953 -18734021 - B1_Mur2 SINE Alu 0 149 3 5 1231 368 191 104 73 chr15 84760875 84760971 -18734003 - MT2B LTR ERVL -362 239 141 5 1231 488 148 111 0 chr15 84761026 84761107 -18733867 - B1_Mus2 SINE Alu -9 138 49 5 1231 426 281 109 27 chr15 84761109 84761292 -18733682 - B3A SINE B2 0 198 1 5 1231 329 308 59 17 chr15 84761387 84761506 -18733468 + ID_B1 SINE B4 87 210 -14 5 1231 1099 103 0 0 chr15 84761561 84761707 -18733267 + B1_Mus1 SINE Alu 3 148 0 5 1231 1192 97 42 21 chr15 84761729 84761919 -18733055 - B2_Mm2 SINE B2 -1 194 1 5 1231 1205 208 202 0 chr15 84762034 84762371 -18732603 - MTD LTR MaLR 0 419 15 5 1231 243 0 0 0 chr15 84762441 84762468 -18732506 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1231 222 37 0 0 chr15 84762468 84762494 -18732480 + (GA)n Simple_repeat Simple_repeat 1 27 0 5 1231 284 254 0 16 chr15 84762820 84762884 -18732090 - B4 SINE B4 -226 66 4 5 1231 275 281 62 10 chr15 84763051 84763148 -18731826 - B4A SINE B4 -16 276 175 5 1231 298 215 15 15 chr15 84763130 84763196 -18731778 - B4A SINE B4 -220 72 7 5 1231 477 199 116 51 chr15 84763474 84763612 -18731362 - B1_Mm SINE Alu 0 147 1 5 1231 433 220 53 35 chr15 84764215 84764328 -18730646 - PB1D10 SINE Alu -1 116 2 5 1231 183 232 57 68 chr15 84764403 84764491 -18730483 + MIR SINE MIR 15 101 -161 5 1231 300 171 52 155 chr15 84764825 84764922 -18730052 - ID_B1 SINE B4 -9 215 129 5 1231 276 280 75 0 chr15 84765111 84765204 -18729770 + PB1D10 SINE Alu 1 100 -17 5 1231 277 382 8 8 chr15 84766531 84766663 -18728311 + MER3 DNA MER1_type 1 132 -77 5 1231 287 276 44 33 chr15 84766691 84766781 -18728193 - B1_Mm SINE Alu -21 126 36 5 1231 241 152 0 0 chr15 84767073 84767119 -18727855 - B1_Mus2 SINE Alu -7 140 95 5 1231 756 222 32 7 chr15 84767602 84767756 -18727218 + RSINE1 SINE B4 8 165 0 5 1231 192 77 0 0 chr15 84768077 84768103 -18726871 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 5 1231 639 159 52 26 chr15 84768103 84768219 -18726755 - B1_Mus2 SINE Alu -2 145 27 5 1231 224 233 0 0 chr15 84768544 84768587 -18726387 + ID4_ SINE ID 1 43 -40 5 1231 183 42 0 0 chr15 84768992 84769016 -18725958 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 1231 667 231 91 49 chr15 84769213 84769477 -18725497 - B4A SINE B4 -15 277 3 5 1231 323 219 99 50 chr15 84771405 84771506 -18723468 + PB1D10 SINE Alu 1 106 -11 5 1231 265 248 81 90 chr15 84771682 84771793 -18723181 - RLTR25A LTR ERVK -472 631 522 5 1231 428 191 44 22 chr15 84771720 84771811 -18723163 - PB1D9 SINE Alu 0 120 28 5 1231 906 210 43 10 chr15 84776063 84776270 -18718704 + ID_B1 SINE B4 7 220 -4 5 1231 453 90 30 9 chr15 84776995 84777071 -18717903 - B1_Mur2 SINE Alu -5 144 43 5 1231 225 287 299 0 chr15 84777389 84777406 -18717568 - B4A SINE B4 -41 251 191 5 1231 476 211 67 0 chr15 84777406 84777510 -18717464 - PB1D10 SINE Alu -1 116 6 5 1231 225 287 299 0 chr15 84777510 84777546 -18717428 - B4A SINE B4 -41 190 48 5 1231 292 315 22 0 chr15 84778355 84778444 -18716530 - MIRb SINE MIR -76 192 102 5 1231 852 221 57 32 chr15 84781732 84782012 -18712962 - L2c LINE L2 -48 3339 3053 5 1231 278 268 36 12 chr15 84782377 84782460 -18712514 - MIRm SINE MIR -110 166 82 5 1231 243 279 68 23 chr15 84784584 84784672 -18710302 + PB1D7 SINE Alu 21 112 -8 5 1231 603 51 0 0 chr15 84785308 84785387 -18709587 + (CA)n Simple_repeat Simple_repeat 1 79 0 5 1231 1130 62 14 14 chr15 84787096 84787243 -18707731 + B1_Mm SINE Alu 1 147 0 5 1231 1433 93 0 35 chr15 84787553 84787754 -18707220 + B2_Mm2 SINE B2 2 195 0 5 1231 760 188 27 20 chr15 84787885 84788032 -18706942 + B1_Mur2 SINE Alu 1 148 -1 5 1231 219 69 0 0 chr15 84790862 84790891 -18704083 + (GGGGA)n Simple_repeat Simple_repeat 1 29 0 5 1231 990 161 11 221 chr15 84791797 84791993 -18702981 + URR1B DNA MER1_type 1 141 -84 5 1231 1213 41 0 27 chr15 84791993 84792143 -18702831 - B1_Mm SINE Alu 0 147 2 5 1231 990 161 11 221 chr15 84792143 84792226 -18702748 + URR1B DNA MER1_type 142 221 -4 5 1231 222 290 16 0 chr15 84792808 84792870 -18702104 + ID4_ SINE ID 17 79 -4 5 1231 618 258 6 37 chr15 84793291 84793452 -18701522 + B3A SINE B2 40 195 -3 5 1231 365 344 24 65 chr15 84793538 84793706 -18701268 - RSINE1 SINE B4 -2 163 3 5 1231 236 293 48 24 chr15 84793706 84793786 -18701188 - PB1D9 SINE Alu -37 83 2 5 1231 272 246 15 15 chr15 84793722 84793788 -18701186 - B4A SINE B4 -142 150 85 5 1231 950 256 14 9 chr15 84793798 84794011 -18700963 - B3 SINE B2 0 216 3 5 1231 2252 75 3 3 chr15 84794023 84794316 -18700658 - L1_Mus1 LINE L1 0 6567 6275 5 1231 267 247 52 0 chr15 84794413 84794490 -18700484 + L1ME1 LINE L1 5657 5737 -427 5 1231 305 324 33 26 chr15 84794541 84794693 -18700281 + L1ME1 LINE L1 5841 5993 -186 5 1231 961 203 37 33 chr15 84794826 84795040 -18699934 + B3 SINE B2 1 215 -1 5 1231 269 294 0 14 chr15 84795240 84795309 -18699665 - ID4 SINE ID -13 70 3 5 1231 310 209 92 76 chr15 84796281 84796400 -18698574 + MER82 DNA MER2_type 77 197 -456 5 1231 290 264 188 36 chr15 84796538 84796703 -18698271 + MER82 DNA MER2_type 435 624 -29 5 1231 407 186 93 73 chr15 84797404 84797561 -18697413 + RMER2 LTR ERV1 27 326 -241 5 1231 1142 75 0 20 chr15 84797577 84797727 -18697247 - B1_Mus1 SINE Alu 0 148 2 5 1231 267 31 0 0 chr15 84797801 84797833 -18697141 + (CTTG)n Simple_repeat Simple_repeat 1 32 0 5 1231 261 0 0 0 chr15 84798075 84798104 -18696870 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1231 276 30 0 0 chr15 84798186 84798219 -18696755 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 1231 324 0 0 0 chr15 84798219 84798254 -18696720 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 1231 855 168 7 0 chr15 84798305 84798442 -18696532 - B1_Mur2 SINE Alu -11 138 1 5 1231 627 292 51 9 chr15 84798442 84798656 -18696318 - ID_B1 SINE B4 0 224 2 5 1231 999 124 28 40 chr15 84798821 84798997 -18695977 - URR1B DNA MER1_type -2 223 50 5 1231 406 313 78 49 chr15 84798997 84799023 -18695951 + CYRA11_Mm Unknown Y-chromosome 173 380 -237 5 1231 215 333 84 21 chr15 84799419 84799514 -18695460 + MIRb SINE MIR 98 198 -70 5 1231 466 301 68 0 chr15 84799764 84799897 -18695077 + ID_B1 SINE B4 81 222 -2 5 1231 689 202 94 73 chr15 84800089 84800281 -18694693 + B3A SINE B2 3 198 0 5 1231 325 359 0 7 chr15 84800348 84800494 -18694480 + (CA)n Simple_repeat Simple_repeat 1 145 0 5 1231 213 204 23 0 chr15 84800943 84800987 -18693987 - RSINE1 SINE B4 -33 132 88 5 1231 212 236 18 18 chr15 84801151 84801207 -18693767 - RSINE1 SINE B4 -22 143 88 5 1231 567 234 28 35 chr15 84802071 84802213 -18692761 - RSINE1 SINE B4 -22 143 3 5 1231 345 239 0 53 chr15 84802239 84802314 -18692660 - ID4_ SINE ID -9 74 4 5 1231 902 156 193 6 chr15 84802342 84802523 -18692451 + B3 SINE B2 1 215 -1 5 1231 31 26 0 0 chr15 84802530 84802568 -18692406 + AT_rich Low_complexity Low_complexity 1 38 0 5 1231 361 298 25 34 chr15 84802601 84802719 -18692255 + PB1D10 SINE Alu 1 117 0 5 1231 658 242 93 6 chr15 84802747 84802930 -18692044 + B4A SINE B4 28 226 -66 5 1231 252 0 0 0 chr15 84803086 84803114 -18691860 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1231 456 67 0 0 chr15 84803114 84803174 -18691800 + (TATG)n Simple_repeat Simple_repeat 2 61 0 5 1232 339 202 0 0 chr15 84806060 84806144 -18688830 + GA-rich Low_complexity Low_complexity 3 86 0 5 1232 290 237 59 24 chr15 84806673 84806793 -18688181 + B1_Mus2 SINE Alu 32 150 0 5 1232 285 102 33 17 chr15 84806798 84806858 -18688116 + GA-rich Low_complexity Low_complexity 3 63 0 5 1232 461 265 61 0 chr15 84807658 84807805 -18687169 - RMER15 LTR ERVL 0 575 420 5 1232 564 205 9 9 chr15 84807976 84808089 -18686885 - PB1D7 SINE Alu -1 119 7 5 1232 236 322 45 11 chr15 84808174 84808262 -18686712 + MER34 LTR ERV1 381 471 -71 5 1232 862 251 27 23 chr15 84808536 84808756 -18686218 + ID_B1 SINE B4 2 222 -2 6 1232 247 283 17 58 chr15 84809257 84809414 -18685560 + B1F SINE Alu 2 148 -1 6 1232 493 275 93 51 chr15 84809466 84809534 -18685440 + ID_B1 SINE B4 1 224 0 6 1232 768 142 0 41 chr15 84809534 84809681 -18685293 + B1_Mur4 SINE Alu 9 149 -1 6 1232 767 225 0 30 chr15 84809720 84809885 -18685089 + B4A SINE B4 133 292 0 6 1232 203 288 0 15 chr15 84810141 84810208 -18684766 + MIRc SINE MIR 86 151 -117 6 1232 230 385 0 0 chr15 84810814 84810879 -18684095 + ID4_ SINE ID 1 65 -18 6 1232 493 193 88 0 chr15 84811008 84811122 -18683852 - B1F2 SINE Alu -3 146 23 6 1232 1513 43 37 16 chr15 84811162 84811352 -18683622 - B2_Mm2 SINE B2 0 195 2 6 1232 210 71 0 0 chr15 84811378 84811406 -18683568 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 1232 464 270 0 0 chr15 84811406 84811506 -18683468 - PB1D9 SINE Alu -15 105 6 6 1232 1252 41 0 0 chr15 84811563 84811709 -18683265 - B1_Mus2 SINE Alu 0 147 2 6 1232 3265 39 0 0 chr15 84811723 84812104 -18682870 - L1Md_T LINE L1 0 6582 6202 6 1232 201 184 0 26 chr15 84812877 84812901 -18682073 + T-rich Low_complexity Low_complexity 16 39 0 6 1232 1598 47 5 0 chr15 84812901 84813091 -18681883 - B2_Mm1a SINE B2 -1 192 2 6 1232 201 184 0 26 chr15 84813091 84813105 -18681869 + T-rich Low_complexity Low_complexity 2 15 0 6 1232 250 238 95 0 chr15 84814812 84814875 -18680099 + ID4 SINE ID 2 70 -13 6 1232 1250 35 0 0 chr15 84814875 84815017 -18679957 + B1_Mus2 SINE Alu 5 147 0 6 1232 21 36 0 0 chr15 84815017 84815045 -18679929 + AT_rich Low_complexity Low_complexity 1 28 0 6 1232 963 276 93 68 chr15 84815255 84815319 -18679655 + MTE2b LTR MaLR 1 59 -320 6 1232 1183 65 146 6 chr15 84815319 84815490 -18679484 + B2_Mm2 SINE B2 1 195 0 6 1232 963 276 93 68 chr15 84815490 84815659 -18679315 + MTE2b LTR MaLR 60 219 -160 6 1232 297 75 0 0 chr15 84815659 84815699 -18679275 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1232 963 276 93 68 chr15 84815699 84815830 -18679144 + MTE2b LTR MaLR 220 375 -4 6 1232 257 351 158 41 chr15 84815939 84816230 -18678744 - L2b LINE L2 -1 3374 3050 6 1232 200 215 0 25 chr15 84816803 84816860 -18678114 + L2b LINE L2 3332 3387 0 6 1232 21 57 0 0 chr15 84818153 84818188 -18676786 + GC_rich Low_complexity Low_complexity 1 35 0 6 1232 210 224 30 30 chr15 84818215 84818316 -18676658 + (CCGCG)n Simple_repeat Simple_repeat 5 105 0 6 1232 198 103 0 0 chr15 84818349 84818378 -18676596 + (CCG)n Simple_repeat Simple_repeat 1 29 0 6 1232 226 265 31 0 chr15 84818406 84818504 -18676470 + C-rich Low_complexity Low_complexity 1 101 0 6 1232 1164 176 23 23 chr15 84819829 84820050 -18674924 - URR1B DNA MER1_type 0 225 5 6 1232 252 256 23 47 chr15 84821001 84821087 -18673887 + MLT1E2 LTR MaLR 513 596 -31 6 1232 198 91 0 0 chr15 84821144 84821177 -18673797 + (T)n Simple_repeat Simple_repeat 1 33 0 6 1232 204 284 47 104 chr15 84821545 84821638 -18673336 + MIR3 SINE MIR 108 200 -8 6 1232 3350 59 0 26 chr15 84821638 84822056 -18672918 - MTB_Mm LTR MaLR 0 407 1 6 1232 204 284 47 104 chr15 84822056 84822068 -18672906 + MIR3 SINE MIR 201 207 -1 6 1232 298 271 34 101 chr15 84822221 84822340 -18672634 - PB1D7 SINE Alu -3 117 7 6 1232 393 256 19 42 chr15 84822267 84822396 -18672578 - ID_B1 SINE B4 -67 157 33 6 1232 665 269 0 7 chr15 84822427 84822577 -18672397 - B4A SINE B4 0 292 144 6 1232 1105 102 55 28 chr15 84822637 84822818 -18672156 - B2_Mm2 SINE B2 -8 187 2 6 1232 753 231 68 29 chr15 84822821 84823026 -18671948 - B3 SINE B2 -1 215 3 6 1232 218 258 39 49 chr15 84823232 84823261 -18671713 - BC1_Mm scRNA scRNA -38 114 86 6 1232 1229 54 0 0 chr15 84823261 84823408 -18671566 - B1_Mus1 SINE Alu 0 148 2 6 1232 276 237 56 18 chr15 84823408 84823484 -18671490 - ID4 SINE ID -67 85 10 6 1232 219 170 0 0 chr15 84823587 84823634 -18671340 + T-rich Low_complexity Low_complexity 1 47 0 6 1232 252 304 113 0 chr15 84823635 84823646 -18671328 - ID_B1 SINE B4 -1 223 213 6 1232 1197 68 0 0 chr15 84823646 84823793 -18671181 - B1_Mus2 SINE Alu 0 147 1 6 1232 252 304 113 0 chr15 84823793 84823804 -18671170 - ID_B1 SINE B4 -12 212 97 6 1232 420 261 33 0 chr15 84823804 84823896 -18671078 - PB1D10 SINE Alu -8 109 15 6 1232 183 100 0 0 chr15 84823936 84823966 -18671008 + (TTA)n Simple_repeat Simple_repeat 2 31 0 6 1232 441 36 0 0 chr15 84823993 84824048 -18670926 + (TTG)n Simple_repeat Simple_repeat 1 55 0 6 1232 825 143 0 8 chr15 84824048 84824171 -18670803 - B1_Mur4 SINE Alu -13 137 15 6 1232 334 230 36 99 chr15 84824080 84824191 -18670783 - MT2B LTR ERVL -344 257 154 6 1232 259 347 103 14 chr15 84824902 84825048 -18669926 + MIR3 SINE MIR 1 159 -117 6 1232 289 264 8 106 chr15 84826317 84826440 -18668534 + RMER15 LTR ERVL 379 489 -86 6 1232 181 231 88 44 chr15 84826540 84826608 -18668366 + L2 LINE L2 94 164 -3255 6 1232 222 37 0 0 chr15 84827070 84827097 -18667877 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1232 660 195 2 0 chr15 84827100 84827225 -18667749 - B1_Mus2 SINE Alu -13 134 10 6 1232 515 252 0 71 chr15 84827295 84827436 -18667538 - ID_B1 SINE B4 -2 222 92 6 1232 207 0 0 0 chr15 84827454 84827477 -18667497 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 1232 450 0 0 0 chr15 84827477 84827526 -18667448 + (GA)n Simple_repeat Simple_repeat 1 50 0 6 1232 577 225 27 55 chr15 84827611 84827741 -18667233 + ID_B1 SINE B4 2 127 -97 6 1232 278 279 23 11 chr15 84827741 84827828 -18667146 + B4A SINE B4 1 88 -204 6 1232 246 266 0 30 chr15 84827915 84827981 -18666993 + B3A SINE B2 125 188 -10 6 1232 260 330 17 26 chr15 84828013 84828128 -18666846 - RMER12 LTR ERVK -470 852 739 6 1232 268 316 69 64 chr15 84828371 84828653 -18666321 - MTE2a LTR MaLR -14 365 65 6 1232 241 315 21 63 chr15 84828691 84828786 -18666188 - MLT1A1 LTR MaLR -279 129 39 6 1232 863 163 13 26 chr15 84828912 84829063 -18665911 - B1_Mur4 SINE Alu 0 150 2 6 1232 569 281 17 109 chr15 84829080 84829410 -18665564 + L1ME2 LINE L1 5704 6003 -176 6 1232 534 227 9 2 chr15 84829428 84829557 -18665417 + B1F SINE Alu 1 129 -20 6 1232 208 150 25 0 chr15 84829561 84829601 -18665373 + GA-rich Low_complexity Low_complexity 2 42 0 6 1232 189 0 0 0 chr15 84829671 84829692 -18665282 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 1232 211 188 35 70 chr15 84829692 84829778 -18665196 + (TA)n Simple_repeat Simple_repeat 2 84 0 6 1232 843 142 15 0 chr15 84829802 84829936 -18665038 + B1_Mur3 SINE Alu 14 149 0 6 1232 193 53 0 73 chr15 84829939 84829980 -18664994 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 6 1232 1214 65 0 6 chr15 84830044 84830215 -18664759 + B2_Mm2 SINE B2 26 195 0 6 1232 469 318 24 0 chr15 84830308 84830434 -18664540 + RSINE1 SINE B4 2 130 -35 6 1232 732 314 79 15 chr15 84830451 84830716 -18664258 - B4A SINE B4 0 292 11 6 1232 715 237 77 0 chr15 84830764 84830933 -18664041 - B3A SINE B2 -16 182 1 6 1232 470 245 39 65 chr15 84831200 84831353 -18663621 + B4 SINE B4 56 204 -88 6 1232 926 50 0 0 chr15 84831240 84831361 -18663613 + B1_Mus1 SINE Alu 2 122 -26 6 1232 430 225 13 115 chr15 84831361 84831387 -18663587 + MT2B LTR ERVL 189 296 -305 6 1232 221 0 35 0 chr15 84831403 84831432 -18663542 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 6 1232 970 228 133 77 chr15 84831455 84831807 -18663167 + MTE2a LTR MaLR 8 379 0 6 1232 183 239 21 21 chr15 84832735 84832782 -18662192 + MIR SINE MIR 41 87 -175 6 1232 431 207 7 0 chr15 84833196 84833341 -18661633 + (CA)n Simple_repeat Simple_repeat 1 146 0 6 1232 225 0 0 0 chr15 84833368 84833393 -18661581 + (TA)n Simple_repeat Simple_repeat 1 25 0 6 1232 250 172 118 0 chr15 84833421 84833514 -18661460 - RLTR14-int LTR ERV1 -4877 440 337 6 1232 480 211 0 0 chr15 84833514 84833656 -18661318 + (CA)n Simple_repeat Simple_repeat 1 142 0 6 1232 485 285 15 23 chr15 84833690 84833823 -18661151 - B3A SINE B2 -66 132 1 6 1232 374 256 67 17 chr15 84833845 84833964 -18661010 + MLT1A LTR MaLR 27 151 -223 6 1232 305 318 35 35 chr15 84834057 84834171 -18660803 + PB1 SINE Alu 12 125 -2 6 1232 856 167 0 0 chr15 84834183 84834333 -18660641 + B1_Mur4 SINE Alu 1 150 0 6 1232 631 230 50 0 chr15 84834434 84834573 -18660401 + B1_Mur2 SINE Alu 3 148 -1 6 1232 340 302 68 25 chr15 84834719 84834882 -18660092 - MLT1D LTR MaLR 0 505 336 6 1232 815 78 9 0 chr15 84835021 84835137 -18659837 + (TCCC)n Simple_repeat Simple_repeat 4 120 0 6 1232 306 0 0 0 chr15 84835137 84835170 -18659804 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 6 1232 704 189 22 43 chr15 84835174 84835312 -18659662 - B1_Mus1 SINE Alu -11 137 3 6 1232 476 376 6 0 chr15 84835476 84835638 -18659336 + RSINE1 SINE B4 3 165 0 6 1232 234 0 0 0 chr15 84835860 84835886 -18659088 + (CAG)n Simple_repeat Simple_repeat 3 28 0 6 1232 216 0 0 0 chr15 84836271 84836295 -18658679 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1232 725 284 0 45 chr15 84836312 84836533 -18658441 + B3 SINE B2 1 211 -5 6 1232 803 173 0 7 chr15 84836533 84836673 -18658301 - B1_Mur2 SINE Alu -9 140 2 6 1232 755 164 49 28 chr15 84836850 84836994 -18657980 - B1_Mus2 SINE Alu 0 147 1 6 1232 297 0 0 0 chr15 84836995 84837028 -18657946 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 1232 611 253 40 0 chr15 84837041 84837191 -18657783 - B3A SINE B2 -41 157 2 7 1232 247 180 0 20 chr15 84837262 84837313 -18657661 - B4 SINE B4 -153 139 90 7 1232 800 167 0 91 chr15 84838245 84838410 -18656564 + B1_Mur4 SINE Alu 1 150 0 7 1232 377 315 0 0 chr15 84839280 84839429 -18655545 + GA-rich Low_complexity Low_complexity 1 149 0 7 1232 23 33 0 0 chr15 84839461 84839491 -18655483 + AT_rich Low_complexity Low_complexity 1 30 0 7 1232 1179 236 33 58 chr15 84839640 84840004 -18654970 - Lx7 LINE L1 -289 7407 7053 7 1232 767 163 59 0 chr15 84840879 84841014 -18653960 - B1_Mur4 SINE Alu -2 148 6 7 1232 1106 75 7 0 chr15 84841033 84841179 -18653795 + B1_Mus2 SINE Alu 1 147 0 7 1232 226 271 0 0 chr15 84841386 84841434 -18653540 - B3A SINE B2 -128 70 23 7 1232 708 148 327 0 chr15 84841447 84841609 -18653365 - B3 SINE B2 0 216 2 7 1232 1169 48 0 0 chr15 84841982 84842129 -18652845 + B1_Mm SINE Alu 1 147 0 7 1232 195 42 0 0 chr15 84842129 84842153 -18652821 + (A)n Simple_repeat Simple_repeat 1 24 0 7 1232 233 193 140 0 chr15 84843212 84843269 -18651705 - ID4_ SINE ID -17 66 2 7 1232 555 146 87 10 chr15 84843502 84843606 -18651368 + B1_Mur1 SINE Alu 21 132 -17 7 1232 775 162 14 14 chr15 84844163 84844301 -18650673 + B1_Mus1 SINE Alu 2 139 -9 7 1232 216 0 0 0 chr15 84844301 84844325 -18650649 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 7 1232 377 239 0 54 chr15 84844360 84844453 -18650521 - RSINE1 SINE B4 -74 91 4 7 1232 381 176 13 13 chr15 84844580 84844655 -18650319 - ID4 SINE ID -6 77 3 7 1232 354 215 74 21 chr15 84844659 84844754 -18650220 - B1F2 SINE Alu -47 102 3 7 1232 294 73 0 0 chr15 84845005 84845046 -18649928 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 7 1232 380 270 115 55 chr15 84845095 84845330 -18649644 - L1MC4 LINE L1 -976 7066 6818 7 1232 25 0 0 0 chr15 84845442 84845467 -18649507 + AT_rich Low_complexity Low_complexity 1 25 0 7 1232 201 74 0 0 chr15 84845470 84845497 -18649477 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 7 1232 429 36 0 0 chr15 84845497 84845551 -18649423 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1232 652 234 289 0 chr15 84845559 84845763 -18649211 - B4A SINE B4 0 292 30 7 1232 342 67 0 0 chr15 84846589 84846634 -18648340 + (TC)n Simple_repeat Simple_repeat 1 45 0 7 1232 280 125 106 30 chr15 84847043 84847109 -18647865 - ID2 SINE ID -11 72 2 7 1232 1343 79 21 0 chr15 84849293 84849482 -18645492 + B2_Mm2 SINE B2 2 194 -1 7 1232 215 173 19 0 chr15 84850220 84850272 -18644702 + CT-rich Low_complexity Low_complexity 2 54 0 7 1232 253 276 0 0 chr15 84850352 84850410 -18644564 - ID4_ SINE ID -25 58 1 7 1232 326 256 13 0 chr15 84852069 84852147 -18642827 + ID4 SINE ID 3 81 -2 7 1232 198 231 0 0 chr15 84852197 84852236 -18642738 + MIR SINE MIR 119 157 -105 7 1232 249 33 0 0 chr15 84852630 84852660 -18642314 + (TC)n Simple_repeat Simple_repeat 2 31 0 7 1232 935 107 52 22 chr15 84853348 84853805 -18641169 + (TAGA)n Simple_repeat Simple_repeat 1 470 0 7 1232 256 368 45 13 chr15 84854202 84854359 -18640615 - RLTR42-int LTR ERVK -4196 1326 1165 7 1232 463 271 35 35 chr15 84854744 84854889 -18640085 + MLT1A0 LTR MaLR 14 158 -207 7 1232 519 258 8 8 chr15 84854893 84855026 -18639948 + ID_B1 SINE B4 87 219 -5 7 1232 1910 94 16 140 chr15 84855082 84855136 -18639838 - ORR1A3 LTR MaLR 0 326 285 7 1232 1275 87 43 0 chr15 84855136 84855320 -18639654 - B2_Mm2 SINE B2 -1 194 3 7 1232 1910 94 16 140 chr15 84855320 84855357 -18639617 - ORR1A3 LTR MaLR -42 284 284 7 1232 1140 75 0 0 chr15 84855357 84855504 -18639470 - B1_Mus2 SINE Alu 0 147 1 7 1232 1910 94 16 140 chr15 84855504 84855783 -18639191 - ORR1A3 LTR MaLR -42 284 1 7 1232 3357 112 42 25 chr15 84856034 84856180 -18638794 + MT2B2 LTR ERVL 5 145 -439 7 1232 1034 70 14 0 chr15 84856180 84856322 -18638652 - B1_Mus1 SINE Alu 0 148 5 7 1232 3357 112 42 25 chr15 84856322 84856745 -18638229 + MT2B2 LTR ERVL 146 584 0 7 1232 180 278 151 34 chr15 84856853 84856972 -18638002 - L2 LINE L2 -444 2975 2843 7 1232 1095 65 0 0 chr15 84858027 84858166 -18636808 - B1_Mus1 SINE Alu -8 140 2 7 1232 309 205 13 13 chr15 84858204 84858283 -18636691 - ID4 SINE ID 0 83 5 7 1232 335 323 0 31 chr15 84858339 84858467 -18636507 - PB1 SINE Alu -3 124 1 7 1232 667 151 12 19 chr15 84858644 84858806 -18636168 + (TA)n Simple_repeat Simple_repeat 1 161 0 7 1232 665 171 233 6 chr15 84858814 84858990 -18635984 + B3 SINE B2 1 216 0 7 1232 463 288 45 0 chr15 84859034 84859166 -18635808 - RSINE1 SINE B4 -26 139 2 7 1232 668 180 52 92 chr15 84859213 84859256 -18635718 - B1_Mur3 SINE Alu 0 149 116 7 1232 2521 58 6 0 chr15 84859256 84859581 -18635393 + ORR1A2 LTR MaLR 1 327 0 7 1232 10466 128 13 12 chr15 84859581 84861370 -18633604 + ORR1A2-int LTR MaLR 1 1792 0 7 1232 2431 62 12 9 chr15 84861370 84861694 -18633280 + ORR1A2 LTR MaLR 1 325 -2 7 1232 668 180 52 92 chr15 84861694 84861801 -18633173 - B1_Mur3 SINE Alu -34 115 5 7 1232 764 130 130 0 chr15 84861818 84861949 -18633025 - B1_Mur1 SINE Alu 0 149 2 7 1232 902 234 26 34 chr15 84861949 84862183 -18632791 - B4A SINE B4 -59 233 2 7 1232 248 275 43 0 chr15 84862183 84862250 -18632724 - MER2B DNA MER2_type -264 72 3 7 1232 422 202 137 26 chr15 84862839 84862956 -18632018 - B1_Mur1 SINE Alu -18 131 2 7 1232 233 358 0 81 chr15 84862956 84863038 -18631936 - B4A SINE B4 -209 83 14 7 1232 318 237 13 0 chr15 84863039 84863115 -18631859 - L1MD LINE L1 -720 5522 5446 7 1232 488 269 104 18 chr15 84863111 84863331 -18631643 - L1M4 LINE L1 -612 5567 5329 7 1232 273 57 0 0 chr15 84863358 84863393 -18631581 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1232 1017 64 0 14 chr15 84863393 84863524 -18631450 - B1_Mus2 SINE Alu -9 138 8 7 1232 603 77 0 42 chr15 84863523 84863618 -18631356 + B1_Mus2 SINE Alu 57 147 0 7 1232 361 279 22 35 chr15 84863747 84863904 -18631070 - L1M4 LINE L1 -989 5344 5189 7 1232 1020 68 0 46 chr15 84864482 84864506 -18630468 + B1_Mus1 SINE Alu 1 24 -124 7 1232 952 198 21 160 chr15 84864506 84864880 -18630094 + RLTRETN_Mm LTR ERVK 1 322 0 7 1232 1020 68 0 46 chr15 84864880 84865008 -18629966 + B1_Mus1 SINE Alu 25 146 -2 7 1232 207 0 0 0 chr15 84865008 84865031 -18629943 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 7 1232 351 0 0 0 chr15 84865233 84865272 -18629702 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1232 519 246 81 52 chr15 84865318 84865528 -18629446 - B4 SINE B4 -75 217 2 7 1232 189 275 61 81 chr15 84865531 84865630 -18629344 + MIRb SINE MIR 126 222 -46 7 1232 539 177 62 4 chr15 84866566 84866698 -18628276 + B1_Mur3 SINE Alu 2 149 0 7 1232 260 311 14 0 chr15 84868913 84868987 -18625987 - B4 SINE B4 -216 76 2 7 1232 991 103 114 6 chr15 84870252 84870427 -18624547 - B2_Mm2 SINE B2 0 195 2 7 1232 512 285 27 14 chr15 84870806 84870952 -18624022 - ID_B1 SINE B4 -1 223 76 7 1232 396 294 39 8 chr15 84871117 84871244 -18623730 + B4A SINE B4 35 165 -127 7 1232 337 183 56 0 chr15 84871340 84871411 -18623563 - ID4 SINE ID -6 77 3 7 1232 485 183 26 1 chr15 84871669 84871770 -18623204 - PB1D9 SINE Alu -43 106 2 7 1232 331 272 14 101 chr15 84871770 84871810 -18623164 - MT2B LTR ERVL -443 158 131 7 1232 277 326 12 0 chr15 84872111 84872197 -18622777 - MLT1H2 LTR MaLR -327 162 76 7 1232 703 208 51 87 chr15 84872353 84872548 -18622426 - B3A SINE B2 -8 190 3 7 1232 281 246 31 23 chr15 84874460 84874575 -18620399 - B1F2 SINE Alu -1 116 6 7 1232 522 0 0 0 chr15 84875697 84875755 -18619219 + (TCCC)n Simple_repeat Simple_repeat 4 61 0 7 1232 189 0 0 0 chr15 84875755 84875775 -18619199 + (TTTC)n Simple_repeat Simple_repeat 3 23 0 7 1232 1106 63 0 0 chr15 84875777 84875920 -18619054 - B1_Mus1 SINE Alu -5 143 1 7 1232 769 179 7 27 chr15 84876447 84876596 -18618378 - B1_Mus2 SINE Alu 0 147 2 7 1232 577 306 64 5 chr15 84877463 84877650 -18617324 + MER58A DNA MER1_type 26 223 -1 7 1232 562 206 72 14 chr15 84878616 84878754 -18616220 - B1_Mur1 SINE Alu -2 147 2 7 1232 279 322 0 0 chr15 84879278 84879368 -18615606 - PB1D10 SINE Alu -7 110 21 7 1232 387 323 0 0 chr15 84879366 84879465 -18615509 - B1F2 SINE Alu -50 99 1 7 1232 1537 149 155 19 chr15 84879478 84879800 -18615174 - ORR1D1 LTR MaLR 0 374 9 7 1232 410 283 9 9 chr15 84879996 84880103 -18614871 + B1F SINE Alu 10 116 -33 7 1232 379 292 75 30 chr15 84880103 84880121 -18614853 + ID_B1 SINE B4 123 221 -3 7 1232 1107 70 0 0 chr15 84880687 84880830 -18614144 + B1_Mus2 SINE Alu 5 147 0 7 1232 781 197 0 0 chr15 84881823 84881970 -18613004 - B1_Mur2 SINE Alu 0 149 3 7 1232 243 0 0 0 chr15 84881979 84882006 -18612968 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1232 690 35 307 9 chr15 84882013 84882127 -18612847 - B1_Mus1 SINE Alu 0 148 1 7 1232 517 95 24 0 chr15 84882177 84882261 -18612713 + B1_Mur4 SINE Alu 65 150 0 7 1232 1089 77 52 62 chr15 84882266 84882460 -18612514 + B2_Mm2 SINE B2 4 195 0 7 1232 409 212 83 70 chr15 84882505 84882662 -18612312 - B3 SINE B2 -56 160 2 7 1232 348 257 0 0 chr15 84882780 84882854 -18612120 - ID_B1 SINE B4 -69 155 82 7 1232 822 169 0 21 chr15 84883237 84883382 -18611592 - B1_Mur1 SINE Alu -6 143 2 7 1232 1134 68 0 0 chr15 84883429 84883577 -18611397 + B1_Mus1 SINE Alu 1 148 0 7 1232 198 0 0 0 chr15 84883577 84883599 -18611375 + (A)n Simple_repeat Simple_repeat 1 22 0 8 1232 207 0 0 0 chr15 84883616 84883639 -18611335 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 8 1232 1688 10 0 0 chr15 84884892 84885085 -18609889 - B2_Mm1t SINE B2 0 193 1 8 1232 751 160 0 46 chr15 84885265 84885416 -18609558 - B1_Mus1 SINE Alu 0 148 5 8 1232 562 225 8 0 chr15 84887195 84887315 -18607659 + ORR1D2 LTR MaLR 1 121 -249 8 1232 319 291 71 43 chr15 84887424 84887564 -18607410 - MTE-int LTR MaLR -564 1016 873 8 1232 571 307 138 31 chr15 84887711 84888000 -18606974 - MTE-int LTR MaLR -940 640 321 8 1232 367 178 4 4 chr15 84888006 84888089 -18606885 + B3 SINE B2 1 83 -112 8 1232 417 320 155 54 chr15 84888145 84888403 -18606571 - MTE-int LTR MaLR -1254 326 43 8 1232 1108 48 7 27 chr15 84888440 84888589 -18606385 - B1_Mus2 SINE Alu 0 147 2 8 1232 245 356 83 52 chr15 84888594 84888846 -18606128 - ORR1E LTR MaLR -3 356 97 8 1232 261 308 40 32 chr15 84888853 84888977 -18605997 - MLT1A1 LTR MaLR -280 128 4 8 1232 34 72 0 0 chr15 84889095 84889164 -18605810 + AT_rich Low_complexity Low_complexity 1 69 0 8 1232 790 157 63 21 chr15 84890183 84890326 -18604648 - B1_Mur2 SINE Alu 0 149 1 8 1232 218 259 172 0 chr15 84890436 84890494 -18604480 - ID4 SINE ID -12 71 4 8 1232 750 154 93 22 chr15 84890502 84890641 -18604333 - B1_Mur1 SINE Alu 0 149 1 8 1232 808 261 80 0 chr15 84893399 84893575 -18601399 + B3A SINE B2 2 191 -7 8 1232 315 0 0 0 chr15 84893580 84893615 -18601359 + (TTA)n Simple_repeat Simple_repeat 2 36 0 8 1232 372 298 10 87 chr15 84893615 84893718 -18601256 - PB1D7 SINE Alu -10 110 13 8 1232 295 278 51 25 chr15 84894324 84894442 -18600532 + Tigger9b DNA MER2_type 348 468 -156 8 1232 242 225 141 0 chr15 84894990 84895061 -18599913 + ID4 SINE ID 3 83 0 8 1232 625 227 61 0 chr15 84895653 84895785 -18599189 - B1_Mus2 SINE Alu -6 141 2 8 1232 681 252 25 0 chr15 84895895 84896054 -18598920 - RSINE1 SINE B4 0 165 3 8 1232 508 250 10 0 chr15 84896314 84896414 -18598560 - RSINE1 SINE B4 -62 103 3 8 1232 1233 48 0 0 chr15 84896956 84897103 -18597871 + B1_Mm SINE Alu 1 147 0 8 1232 213 39 0 0 chr15 84897103 84897129 -18597845 + (A)n Simple_repeat Simple_repeat 1 26 0 8 1232 532 213 92 78 chr15 84897796 84897949 -18597025 + MTD LTR MaLR 265 419 0 8 1232 664 171 13 52 chr15 84897978 84898132 -18596842 + B1_Mus1 SINE Alu 1 148 0 8 1232 955 47 8 8 chr15 84898651 84898779 -18596195 + B1_Mus1 SINE Alu 20 147 -1 8 1232 325 344 20 42 chr15 84898809 84898956 -18596018 + L2a LINE L2 2966 3114 -312 8 1232 746 131 88 0 chr15 84899208 84899345 -18595629 - B1_Mur4 SINE Alu 0 150 2 8 1232 26 0 0 0 chr15 84899993 84900019 -18594955 + AT_rich Low_complexity Low_complexity 1 26 0 8 1232 219 258 113 0 chr15 84900536 84900598 -18594376 - MIR SINE MIR -8 254 186 8 1232 223 310 102 45 chr15 84900928 84901104 -18593870 - MIR3 SINE MIR -6 202 17 8 1232 766 226 105 5 chr15 84901604 84901804 -18593170 - ID_B1 SINE B4 -4 220 1 8 1232 534 291 68 0 chr15 84902249 84902397 -18592577 - RSINE1 SINE B4 -4 161 4 8 1232 645 260 0 14 chr15 84902453 84902601 -18592373 - B1F1 SINE Alu -2 147 2 8 1232 821 247 105 0 chr15 84902915 84903105 -18591869 + B3 SINE B2 3 212 -4 8 1232 1969 83 28 10 chr15 84903394 84903685 -18591289 + L1Md_F2 LINE L1 6277 6572 -10 8 1232 255 119 24 0 chr15 84903712 84903754 -18591220 + RLTR42 LTR ERVK 1 43 -196 8 1232 10489 122 62 32 chr15 84903756 84905264 -18589710 + RLTR42-int LTR ERVK 2233 3770 -1752 8 1232 880 88 248 7 chr15 84905264 84905413 -18589561 + B2_Mm2 SINE B2 3 187 -8 8 1232 10489 122 62 32 chr15 84905413 84905921 -18589053 + RLTR42-int LTR ERVK 3771 4310 -1212 8 1232 5579 139 62 34 chr15 84905944 84906996 -18587978 + RLTR42-int LTR ERVK 4394 5474 -48 8 1232 901 172 38 0 chr15 84906996 84907153 -18587821 + RLTR42 LTR ERVK 76 238 -1 8 1232 926 259 9 9 chr15 84907188 84907402 -18587572 + ID_B1 SINE B4 4 217 -7 8 1232 223 85 102 41 chr15 84907918 84907967 -18587007 + PB1D10 SINE Alu 61 112 -5 8 1232 241 275 49 12 chr15 84907984 84908065 -18586909 + MER21B LTR ERV1 5 88 -775 8 1232 427 310 131 50 chr15 84908265 84908400 -18586574 + MER21B LTR ERV1 326 466 -397 8 1232 1724 175 72 40 chr15 84908400 84908783 -18586191 + RMER10A LTR ERVL 1 396 -46 8 1232 645 25 0 0 chr15 84908783 84908862 -18586112 + (TAA)n Simple_repeat Simple_repeat 3 81 0 8 1232 1724 175 72 40 chr15 84908862 84908906 -18586068 + RMER10A LTR ERVL 397 442 0 8 1232 427 286 125 54 chr15 84908906 84909140 -18585834 + MER21B LTR ERV1 467 765 -98 8 1232 269 186 84 14 chr15 84909189 84909260 -18585714 - B4A SINE B4 0 292 217 8 1232 740 174 99 55 chr15 84909257 84909439 -18585535 - B3 SINE B2 0 216 27 8 1232 237 65 0 0 chr15 84909475 84909506 -18585468 + (T)n Simple_repeat Simple_repeat 1 31 0 8 1232 38884 12 3 0 chr15 84909581 84915821 -18579153 - L1Md_A LINE L1 -1 6581 322 8 1232 276 194 85 192 chr15 84915821 84915925 -18579049 - B3A SINE B2 -85 131 42 8 1232 430 77 0 0 chr15 84915925 84915990 -18578984 - L1Md_F2 LINE L1 -19 6563 6499 8 1232 290 122 0 0 chr15 84915990 84916031 -18578943 - B2_Mm2 SINE B2 -154 41 1 8 1232 806 317 5 28 chr15 84916032 84916243 -18578731 - B4A SINE B4 -86 206 1 8 1232 2118 129 13 0 chr15 84916954 84917263 -18577711 + ORR1A2 LTR MaLR 1 313 -14 8 1232 2379 162 34 20 chr15 84917266 84917708 -18577266 + ORR1A2-int LTR MaLR 1 448 -1515 8 1232 582 96 12 0 chr15 84917700 84917783 -18577191 + ORR1A2-int LTR MaLR 1880 1963 0 8 1232 937 93 0 0 chr15 84917783 84917912 -18577062 + ORR1A2 LTR MaLR 1 129 -197 8 1232 1629 232 48 10 chr15 84917915 84918382 -18576592 + RMER4B LTR ERVK 72 585 0 8 1232 615 268 89 70 chr15 84918490 84918916 -18576058 - L1MA4 LINE L1 -404 5896 5463 8 1232 630 261 73 74 chr15 84918929 84919292 -18575682 - L1MA4 LINE L1 -777 5100 4765 8 1232 352 306 25 83 chr15 84919707 84919828 -18575146 - PB1D10 SINE Alu -3 114 1 8 1232 435 271 0 36 chr15 84920396 84920507 -18574467 - PB1D10 SINE Alu -6 111 5 8 1232 254 139 56 0 chr15 84921471 84921543 -18573431 + (TA)n Simple_repeat Simple_repeat 1 76 0 8 1232 353 195 115 0 chr15 84921985 84922072 -18572902 + PB1D9 SINE Alu 18 114 -6 8 1232 844 237 58 0 chr15 84922600 84922773 -18572201 - B3A SINE B2 -15 183 1 8 1232 334 303 96 0 chr15 84922774 84922952 -18572022 - L1MC5 LINE L1 -32 7929 7735 8 1232 377 188 93 12 chr15 84923106 84923192 -18571782 - B1_Mur3 SINE Alu 0 149 57 8 1232 957 129 0 21 chr15 84923201 84923343 -18571631 - B1_Mur4 SINE Alu -10 140 2 8 1232 373 259 82 0 chr15 84923557 84923642 -18571332 + ID_B1 SINE B4 86 177 -47 8 1232 466 256 149 78 chr15 84923707 84924226 -18570748 + L1M5 LINE L1 3132 3724 -2422 8 1232 1122 48 7 40 chr15 84924226 84924378 -18570596 + B1_Mus2 SINE Alu 1 147 0 8 1232 466 256 149 78 chr15 84924378 84924527 -18570447 + L1M5 LINE L1 3725 3848 -2298 8 1232 316 245 170 39 chr15 84924613 84924766 -18570208 + L1MD LINE L1 3950 4122 -2024 8 1232 229 211 70 0 chr15 84924774 84924845 -18570129 + L1M5 LINE L1 4229 4304 -1842 8 1232 180 0 0 0 chr15 84924861 84924881 -18570093 + (T)n Simple_repeat Simple_repeat 1 20 0 8 1232 1047 76 21 0 chr15 84924881 84925025 -18569949 - B1_Mus1 SINE Alu 0 148 2 8 1232 231 299 16 0 chr15 84924921 84925048 -18569926 - ORR1B1-int LTR MaLR -755 754 626 8 1232 474 272 39 31 chr15 84925067 84925196 -18569778 - RSINE1 SINE B4 -29 136 7 8 1232 620 266 82 35 chr15 84925198 84925541 -18569433 + L1M5 LINE L1 4320 4678 -1468 8 1232 232 329 0 12 chr15 84925559 84925639 -18569335 + L2a LINE L2 3347 3425 -1 8 1232 725 228 0 7 chr15 84925736 84925873 -18569101 - B1_Mur2 SINE Alu -12 137 2 8 1232 825 168 49 7 chr15 84926151 84926295 -18568679 - B1_Mur4 SINE Alu 0 150 1 8 1232 357 316 67 39 chr15 84926322 84926500 -18568474 - B3A SINE B2 -15 183 1 8 1232 640 30 300 0 chr15 84926556 84926656 -18568318 - B1_Mus1 SINE Alu 0 148 19 8 1232 24 0 0 0 chr15 84926656 84926680 -18568294 + AT_rich Low_complexity Low_complexity 1 24 0 8 1232 22 35 0 0 chr15 84927469 84927498 -18567476 + AT_rich Low_complexity Low_complexity 1 29 0 8 1232 1024 189 73 0 chr15 84928598 84928789 -18566185 + B3 SINE B2 10 214 -2 8 1232 581 269 81 16 chr15 84928791 84928976 -18565998 + B3 SINE B2 1 197 -19 8 1232 830 64 0 9 chr15 84929033 84929135 -18565839 + B1_Mm SINE Alu 37 138 -9 8 1232 207 0 0 0 chr15 84929135 84929158 -18565816 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 8 1232 256 200 27 0 chr15 84929233 84929308 -18565666 + (TA)n Simple_repeat Simple_repeat 2 78 0 8 1232 807 216 118 128 chr15 84929703 84929796 -18565178 - MT2A LTR ERVL -239 294 179 8 1232 765 31 0 0 chr15 84929796 84929892 -18565082 + (TTTC)n Simple_repeat Simple_repeat 2 97 0 8 1232 807 216 118 128 chr15 84929892 84930095 -18564879 - MT2A LTR ERVL -355 178 2 8 1232 276 132 57 0 chr15 84930095 84930148 -18564826 - MERVL-int LTR ERVL 0 5761 5706 8 1232 269 187 0 39 chr15 84930149 84930227 -18564747 - ORR1A3-int LTR MaLR -1325 638 564 8 1232 15263 196 55 24 chr15 84930352 84932150 -18562824 - MERVL-int LTR ERVL -106 5379 3517 8 1232 1158 109 5 66 chr15 84932150 84932346 -18562628 - B2_Mm2 SINE B2 -11 184 1 8 1232 15263 196 55 24 chr15 84932346 84933915 -18561059 - MERVL-int LTR ERVL -1969 3516 1906 8 1232 1726 153 37 0 chr15 84933921 84934215 -18560759 - MERVL-int LTR ERVL -4586 1175 871 8 1232 1296 101 21 0 chr15 84934239 84934427 -18560547 + B2_Mm2 SINE B2 2 193 -2 8 1232 1329 84 6 0 chr15 84934428 84934606 -18560368 + B2_Mm1a SINE B2 1 179 -14 8 1233 2976 178 56 10 chr15 84934673 84935296 -18559678 - MERVL-int LTR ERVL -5109 652 1 8 1233 1268 193 219 87 chr15 84935296 84935340 -18559634 - MT2A LTR ERVL 0 533 464 8 1233 396 0 0 0 chr15 84935340 84935384 -18559590 + (TCTA)n Simple_repeat Simple_repeat 4 47 0 8 1233 1268 193 219 87 chr15 84935384 84935810 -18559164 - MT2A LTR ERVL -70 463 2 8 1233 331 70 0 0 chr15 84935945 84935988 -18558986 - MTD LTR MaLR 0 419 377 8 1233 528 183 2 41 chr15 84935988 84936097 -18558877 + B1_Mus1 SINE Alu 1 106 -14 8 1233 402 21 0 0 chr15 84936097 84936144 -18558830 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 8 1233 1640 228 73 22 chr15 84936150 84936518 -18558456 - MTD LTR MaLR -30 389 3 8 1233 801 249 15 36 chr15 84936636 84936832 -18558142 + B3A SINE B2 1 192 -6 8 1233 750 176 55 62 chr15 84936847 84936992 -18557982 - B1_Mur2 SINE Alu -5 144 1 8 1233 487 200 191 8 chr15 84937101 84937227 -18557747 + B1_Mur2 SINE Alu 1 149 0 8 1233 21 0 0 0 chr15 84937313 84937334 -18557640 + AT_rich Low_complexity Low_complexity 1 21 0 8 1233 609 204 0 0 chr15 84938027 84938164 -18556810 + CT-rich Low_complexity Low_complexity 1 137 0 8 1233 1365 95 11 0 chr15 84938164 84938353 -18556621 - B2_Mm1t SINE B2 -2 191 1 8 1233 889 220 45 45 chr15 84938605 84938805 -18556169 - B3 SINE B2 -15 201 2 9 1233 671 221 61 8 chr15 84938826 84938958 -18556016 - ID_B1 SINE B4 -2 222 84 9 1233 1113 191 34 10 chr15 84939369 84939575 -18555399 + B3 SINE B2 1 211 -5 9 1233 21 82 0 0 chr15 84939578 84939627 -18555347 + AT_rich Low_complexity Low_complexity 1 49 0 9 1233 277 301 148 13 chr15 84939713 84939868 -18555106 - MIRb SINE MIR -8 260 85 9 1233 23 0 0 0 chr15 84939916 84939939 -18555035 + AT_rich Low_complexity Low_complexity 1 23 0 9 1233 638 344 68 5 chr15 84940030 84940249 -18554725 - B4A SINE B4 0 292 60 9 1233 498 157 134 15 chr15 84940326 84940501 -18554473 + RMER17A2 LTR ERVK 1 79 -827 9 1233 1010 258 9 5 chr15 84940720 84940934 -18554040 + ID_B1 SINE B4 2 216 -8 9 1233 1214 34 0 13 chr15 84941528 84941677 -18553297 + B1_Mus1 SINE Alu 2 148 0 9 1233 206 32 0 31 chr15 84942075 84942107 -18552867 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 9 1233 562 279 24 65 chr15 84942109 84942278 -18552696 - RSINE1 SINE B4 -3 162 1 9 1233 1083 115 58 0 chr15 84942285 84942459 -18552515 - B2_Mm1t SINE B2 -6 187 4 9 1233 1045 214 11 11 chr15 84942491 84942680 -18552294 - B3 SINE B2 -27 189 1 9 1233 573 198 31 10 chr15 84942756 84942853 -18552121 + B1_Mur2 SINE Alu 3 101 -48 9 1233 21 0 0 0 chr15 84944054 84944075 -18550899 + AT_rich Low_complexity Low_complexity 1 21 0 9 1233 295 332 0 0 chr15 84944189 84944262 -18550712 + ID SINE ID 7 79 -213 9 1233 1505 28 66 0 chr15 84944276 84944457 -18550517 - B2_Mm1a SINE B2 0 193 1 9 1233 22 0 0 0 chr15 84944961 84944983 -18549991 + AT_rich Low_complexity Low_complexity 1 22 0 9 1233 1271 40 0 0 chr15 84945436 84945584 -18549390 + B1_Mus1 SINE Alu 1 148 0 9 1233 1119 184 18 23 chr15 84945836 84946053 -18548921 - B3 SINE B2 0 216 1 9 1233 480 281 78 46 chr15 84946480 84946633 -18548341 + RSINE1 SINE B4 8 165 0 9 1233 677 238 123 18 chr15 84946825 84946996 -18547978 - B3 SINE B2 0 216 28 9 1233 212 364 22 22 chr15 84947042 84947132 -18547842 - L2c LINE L2 -4 3383 3294 9 1233 499 45 0 15 chr15 84947177 84947244 -18547730 + L1_Mus1 LINE L1 6493 6558 -9 9 1233 257 236 55 0 chr15 84947906 84947961 -18547013 - Tigger7 DNA MER2_type -48 2443 2386 9 1233 195 232 232 0 chr15 84948181 84948237 -18546737 - L2c LINE L2 -4 3383 3315 9 1233 659 283 133 13 chr15 84948262 84948488 -18546486 + B4A SINE B4 40 292 0 9 1233 666 241 7 0 chr15 84948628 84948769 -18546205 + B1_Mur1 SINE Alu 1 142 -7 9 1233 307 180 0 0 chr15 84948805 84948855 -18546119 + B3A SINE B2 1 50 -148 9 1233 854 311 180 23 chr15 84948912 84949528 -18545446 - L2c LINE L2 -467 2952 2240 9 1233 402 108 85 98 chr15 84950113 84950195 -18544779 + RMER4A LTR ERVK 312 392 -74 9 1233 890 299 83 7 chr15 84950395 84950695 -18544279 - MER2 DNA MER2_type -22 323 1 9 1233 611 233 13 46 chr15 84952344 84952497 -18542477 - B1_Mur2 SINE Alu 0 149 2 9 1233 25 31 0 0 chr15 84952519 84952551 -18542423 + AT_rich Low_complexity Low_complexity 1 32 0 9 1233 937 140 0 0 chr15 84952632 84952775 -18542199 + B1_Mus1 SINE Alu 6 148 0 9 1233 210 71 0 0 chr15 84952775 84952803 -18542171 + (A)n Simple_repeat Simple_repeat 1 28 0 9 1233 592 243 65 38 chr15 84952808 84952907 -18542067 - L1MC3 LINE L1 -1408 6377 6281 9 1233 376 296 104 60 chr15 84952907 84953090 -18541884 + B3A SINE B2 5 195 -3 9 1233 592 243 65 38 chr15 84953090 84953281 -18541693 - L1MC3 LINE L1 -1505 6280 6079 9 1233 227 299 62 16 chr15 84953330 84953459 -18541515 + L1MC3 LINE L1 7650 7784 -1 9 1233 690 195 0 8 chr15 84953470 84953589 -18541385 + PB1D9 SINE Alu 3 120 0 9 1233 1098 116 0 0 chr15 84953614 84953761 -18541213 - B1_Mus2 SINE Alu 0 147 1 9 1233 352 239 75 0 chr15 84953794 84953861 -18541113 + ID2 SINE ID 4 75 -8 9 1233 551 276 23 16 chr15 84953920 84954049 -18540925 + RSINE1 SINE B4 20 149 -16 9 1233 723 206 24 0 chr15 84954533 84954659 -18540315 - ID_B1 SINE B4 -12 212 84 9 1233 1269 28 0 0 chr15 84954942 84955085 -18539889 - B1_Mus1 SINE Alu -5 143 1 9 1233 237 196 0 0 chr15 84955207 84955258 -18539716 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 9 1233 326 294 55 110 chr15 84955304 84955522 -18539452 - L2a LINE L2 -1 3425 3220 9 1233 354 219 121 29 chr15 84955657 84955831 -18539143 + Charlie1b DNA MER1_type 202 391 -132 9 1233 840 222 79 5 chr15 84955886 84956076 -18538898 + B3 SINE B2 2 205 -11 9 1233 1908 137 65 10 chr15 84956096 84956406 -18538568 + RLTR25A LTR ERVK 7 333 -770 9 1233 1227 59 0 0 chr15 84956408 84956560 -18538414 + B2_Mm2 SINE B2 2 153 -42 9 1233 1239 169 95 37 chr15 84956557 84956852 -18538122 + RLTR25A LTR ERVK 551 862 -166 9 1233 252 140 113 81 chr15 84957035 84957097 -18537877 + RLTR25B LTR ERVK 757 820 -208 9 1233 356 236 191 0 chr15 84957114 84957145 -18537829 + RLTR25B LTR ERVK 898 936 -92 9 1233 321 26 0 0 chr15 84957145 84957183 -18537791 + (GA)n Simple_repeat Simple_repeat 1 38 0 9 1233 356 236 191 0 chr15 84957183 84957261 -18537713 + RLTR25B LTR ERVK 937 1027 -1 9 1233 262 302 56 19 chr15 84957273 84957381 -18537593 + Charlie1b DNA MER1_type 412 523 0 9 1233 867 186 14 0 chr15 84957673 84957818 -18537156 - B1_Mur3 SINE Alu 0 149 3 9 1233 28 61 0 0 chr15 84957818 84957867 -18537107 + AT_rich Low_complexity Low_complexity 1 49 0 9 1233 1049 45 74 7 chr15 84958517 84958652 -18536322 + B1_Mus1 SINE Alu 5 148 0 9 1233 442 223 146 0 chr15 84958731 84958834 -18536140 - B1_Mur3 SINE Alu 0 149 32 9 1233 180 267 31 77 chr15 84958953 84959018 -18535956 - L2a LINE L2 -589 2830 2769 9 1233 21 71 0 0 chr15 84959093 84959135 -18535839 + AT_rich Low_complexity Low_complexity 1 42 0 9 1233 286 290 110 0 chr15 84959173 84959273 -18535701 + PB1D10 SINE Alu 1 111 -6 9 1233 791 48 10 0 chr15 84959674 84959778 -18535196 + (TA)n Simple_repeat Simple_repeat 2 106 0 9 1233 1079 61 8 0 chr15 84959800 84959932 -18535042 + B1_Mus2 SINE Alu 2 134 -13 9 1233 348 24 0 0 chr15 84959951 84959992 -18534982 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 9 1233 244 209 65 11 chr15 84960489 84960581 -18534393 + (TGAA)n Simple_repeat Simple_repeat 4 100 0 9 1233 391 296 413 3 chr15 84960799 84961124 -18533850 + MER68 LTR ERVL 90 547 -16 9 1233 363 23 0 0 chr15 84963482 84963526 -18531448 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 1233 1256 41 0 0 chr15 84963635 84963782 -18531192 - B1_Mus1 SINE Alu 0 148 2 9 1233 242 274 9 0 chr15 84963992 84964105 -18530869 + (CA)n Simple_repeat Simple_repeat 1 114 0 9 1233 279 0 0 0 chr15 84964328 84964359 -18530615 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 1233 342 0 0 0 chr15 84964749 84964787 -18530187 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 9 1233 1008 48 63 0 chr15 84964787 84964913 -18530061 - B1_Mm SINE Alu -12 135 2 9 1233 205 204 37 0 chr15 84965004 84965058 -18529916 + (TG)n Simple_repeat Simple_repeat 1 56 0 9 1233 226 0 59 0 chr15 84965135 84965169 -18529805 + (TA)n Simple_repeat Simple_repeat 2 37 0 9 1233 502 205 89 47 chr15 84966144 84966313 -18528661 - MTD LTR MaLR 0 419 244 9 1233 233 29 29 0 chr15 84966482 84966516 -18528458 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 9 1233 365 62 123 0 chr15 84967658 84967723 -18527251 + ID4 SINE ID 1 73 -10 9 1233 213 140 0 23 chr15 84968681 84968725 -18526249 + T-rich Low_complexity Low_complexity 3 45 0 9 1233 619 197 0 54 chr15 84968841 84968970 -18526004 - B1_Mur2 SINE Alu 0 149 28 9 1233 326 271 73 0 chr15 84969174 84969270 -18525704 + PB1D10 SINE Alu 14 116 -1 9 1233 394 247 137 97 chr15 84969815 84969845 -18525129 - B2_Mm2 SINE B2 -12 183 158 9 1233 396 0 0 0 chr15 84969845 84969889 -18525085 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 1233 595 247 137 97 chr15 84969889 84970033 -18524941 - B3A SINE B2 -34 164 2 9 1233 258 328 96 7 chr15 84970095 84970230 -18524744 - MIRb SINE MIR -93 175 29 9 1233 1354 252 47 49 chr15 84970267 84970697 -18524277 + BGLII_B LTR ERVK 1 429 -12 9 1233 811 216 132 40 chr15 84970778 84971090 -18523884 - MT2A LTR ERVL 0 601 114 9 1233 946 246 127 34 chr15 84971090 84971345 -18523629 - ORR1C1 LTR MaLR -2 376 1 9 1233 529 159 63 36 chr15 84971345 84971456 -18523518 - MT2A LTR ERVL -419 114 1 9 1233 624 156 0 0 chr15 84974143 84974252 -18520722 + (CATATA)n Simple_repeat Simple_repeat 3 111 0 9 1233 814 223 46 5 chr15 84974266 84974460 -18520514 - B3 SINE B2 -14 202 1 9 1233 272 295 149 46 chr15 84975141 84975443 -18519531 - MLT1J LTR MaLR -30 482 150 9 1233 263 192 215 13 chr15 84976254 84976331 -18518643 - MLT1J LTR MaLR -297 170 78 9 1233 665 176 26 25 chr15 84976331 84976564 -18518410 - ORR1B1 LTR MaLR 0 394 178 9 1233 1931 177 40 6 chr15 84976687 84977039 -18517935 + ORR1B2 LTR MaLR 2 365 -2 9 1233 27 29 0 0 chr15 84977629 84977663 -18517311 + AT_rich Low_complexity Low_complexity 1 34 0 9 1233 287 292 25 102 chr15 84977790 84977908 -18517066 + MT2B2 LTR ERVL 147 255 -329 9 1233 563 248 0 0 chr15 84977817 84977926 -18517048 + PB1D10 SINE Alu 9 117 0 9 1233 344 272 29 0 chr15 84978146 84978249 -18516725 + L1MC1 LINE L1 5850 5955 -378 9 1233 1724 221 44 134 chr15 84978824 84978921 -18516053 + RMER1C Other Other 788 870 -472 9 1233 294 95 0 0 chr15 84978921 84978963 -18516011 + (CTG)n Simple_repeat Simple_repeat 3 44 0 9 1233 1724 208 42 156 chr15 84978963 84979124 -18515850 + RMER1C Other Other 871 1048 -294 9 1233 1098 61 6 58 chr15 84979124 84979280 -18515694 + B1_Mus1 SINE Alu 1 148 0 9 1233 1724 208 42 156 chr15 84979280 84979661 -18515313 + RMER1C Other Other 1049 1342 0 9 1233 690 257 235 33 chr15 84980805 84981252 -18513722 + L1MB7 LINE L1 5607 6144 -40 9 1233 250 223 37 46 chr15 84981392 84981500 -18513474 + Lx4A LINE L1 6945 7051 -7 9 1233 2166 132 93 10 chr15 84982430 84982837 -18512137 - RMER10A LTR ERVL 0 442 2 9 1233 200 343 58 10 chr15 84983497 84983600 -18511374 - MIRb SINE MIR -126 142 35 1 1233 309 202 74 37 chr15 84983716 84983824 -18511150 + RSINE1 SINE B4 54 165 0 1 1233 451 60 47 12 chr15 84983861 84983946 -18511028 + (CA)n Simple_repeat Simple_repeat 2 89 0 1 1233 927 181 93 29 chr15 84983985 84984190 -18510784 + B4 SINE B4 11 228 -64 1 1233 706 171 81 0 chr15 84984190 84984313 -18510661 + B1_Mur3 SINE Alu 1 133 -16 1 1233 853 213 111 34 chr15 84984313 84984369 -18510605 + B4A SINE B4 230 292 0 1 1233 432 118 0 0 chr15 84984369 84984437 -18510537 + (CATA)n Simple_repeat Simple_repeat 1 68 0 1 1233 272 268 54 40 chr15 84984441 84984515 -18510459 + B4A SINE B4 218 292 0 1 1233 535 249 32 111 chr15 84984681 84984871 -18510103 - MER57C2 LTR ERV1 -245 189 15 1 1233 1036 179 68 5 chr15 84985087 84985278 -18509696 + B3 SINE B2 3 205 -11 1 1233 1360 76 37 16 chr15 84985311 84985499 -18509475 + B2_Mm2 SINE B2 3 194 -1 1 1233 233 333 49 35 chr15 84985504 84985647 -18509327 + L2 LINE L2 2439 2583 -836 1 1233 411 56 0 0 chr15 84985649 84985703 -18509271 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1233 478 145 56 16 chr15 84985703 84985829 -18509145 + GA-rich Low_complexity Low_complexity 5 135 0 1 1233 2317 117 73 3 chr15 84987722 84988090 -18506884 - ORR1B1 LTR MaLR 0 394 1 1 1233 1406 211 99 20 chr15 84988163 84988506 -18506468 - ORR1D2 LTR MaLR 0 370 1 1 1233 405 0 0 0 chr15 84989383 84989428 -18505546 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 1 1233 1270 87 41 0 chr15 84989428 84989600 -18505374 - B2_Mm2 SINE B2 -15 180 2 1 1233 1027 101 0 0 chr15 84989618 84989757 -18505217 - B2_Mm2 SINE B2 -55 140 2 1 1233 208 302 74 44 chr15 84989757 84989892 -18505082 - L2a LINE L2 -107 3319 3181 1 1233 796 338 57 12 chr15 84989904 84990236 -18504738 - LTR16A LTR ERVL -8 443 97 1 1233 851 171 7 28 chr15 84991064 84991208 -18503766 + B1_Mur3 SINE Alu 1 141 -8 1 1233 193 262 149 37 chr15 84991229 84991336 -18503638 - MIRb SINE MIR -118 150 32 1 1233 2097 146 12 49 chr15 84992106 84992532 -18502442 + RMER17C LTR ERVK 1 410 0 1 1233 238 167 44 29 chr15 84992609 84992677 -18502297 + MIRc SINE MIR 103 171 -97 1 1233 1088 37 0 29 chr15 84992743 84992881 -18502093 + B1_Mm SINE Alu 1 134 -13 1 1233 236 28 56 0 chr15 84992881 84992917 -18502057 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 1 1233 189 333 0 13 chr15 84992955 84993034 -18501940 + L3 LINE CR1 3693 3770 -719 1 1233 606 273 108 23 chr15 84994169 84994383 -18500591 + B4 SINE B4 1 232 -60 1 1233 706 307 9 44 chr15 84994415 84994643 -18500331 + B4A SINE B4 72 291 -1 1 1233 1170 62 7 0 chr15 84994691 84994836 -18500138 - B1_Mus2 SINE Alu 0 147 2 1 1233 276 263 0 0 chr15 84994863 84994920 -18500054 + B4 SINE B4 236 292 0 1 1233 368 215 0 48 chr15 84995419 84995502 -18499472 + RMER15 LTR ERVL 351 429 -146 1 1233 1208 130 103 15 chr15 84995791 84995994 -18498980 - URR1B DNA MER1_type 0 225 5 1 1233 185 250 83 0 chr15 84996588 84996636 -18498338 + L2b LINE L2 3320 3371 -4 1 1233 918 230 68 9 chr15 84997861 84998080 -18496894 - RMER15 LTR ERVL 0 575 344 1 1233 1013 88 0 0 chr15 84998064 84998201 -18496773 + B1_Mus1 SINE Alu 6 142 -6 1 1233 1184 241 110 22 chr15 84998215 84998430 -18496544 - RMER15 LTR ERVL -201 374 128 1 1233 600 50 0 0 chr15 84998430 84998510 -18496464 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 1233 1184 241 110 22 chr15 84998510 84998612 -18496362 - RMER15 LTR ERVL -448 127 29 1 1233 191 239 0 0 chr15 84999333 84999381 -18495593 - MIRc SINE MIR -99 163 117 1 1233 740 233 132 0 chr15 84999584 84999773 -18495201 - B3 SINE B2 -1 215 2 1 1233 462 49 0 0 chr15 84999899 84999960 -18495014 + (TTTC)n Simple_repeat Simple_repeat 4 64 0 1 1233 297 0 0 0 chr15 84999960 84999992 -18494982 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 1 1233 414 0 0 0 chr15 85000000 85000046 -18494928 + (TTTC)n Simple_repeat Simple_repeat 1 46 0 1 1233 566 162 133 25 chr15 85000047 85000167 -18494807 - B1_Mus2 SINE Alu -13 134 2 2 1233 648 242 107 29 chr15 85001366 85001608 -18493366 - MLT1B LTR MaLR -88 302 42 3 1233 405 0 0 0 chr15 85001639 85001684 -18493290 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1233 781 168 203 61 chr15 85001949 85002146 -18492828 + URR1B DNA MER1_type 1 225 0 5 1233 432 0 0 0 chr15 85002513 85002561 -18492413 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 1233 790 255 59 23 chr15 85003143 85003364 -18491610 - B4A SINE B4 -54 238 10 7 1233 665 324 128 26 chr15 85003989 85004417 -18490557 + L1MDa LINE L1 851 1322 -5311 8 1233 313 243 27 0 chr15 85004815 85004889 -18490085 + B3A SINE B2 4 79 -119 9 1233 288 0 0 0 chr15 85004918 85004950 -18490024 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1233 858 239 14 36 chr15 85005061 85005248 -18489726 + B3 SINE B2 1 188 -28 1 1233 363 44 0 0 chr15 85005248 85005293 -18489681 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1233 858 239 14 36 chr15 85005293 85005326 -18489648 + B3 SINE B2 189 216 0 1 1233 234 263 0 50 chr15 85005346 85005406 -18489568 + 4.5SRNA scRNA scRNA 32 88 -6 1 1233 507 253 0 0 chr15 85005354 85005449 -18489525 + B1F2 SINE Alu 42 136 -13 1 1233 843 10 0 0 chr15 85005464 85005560 -18489414 + (GGAA)n Simple_repeat Simple_repeat 3 98 0 1 1233 249 57 0 0 chr15 85005601 85005636 -18489338 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 1 1233 658 88 127 34 chr15 85005639 85005757 -18489217 - B1_Mus1 SINE Alu 0 148 20 1 1233 1129 163 20 5 chr15 85005765 85005968 -18489006 - B3 SINE B2 -10 206 1 1 1233 311 254 0 14 chr15 85006041 85006113 -18488861 + PB1D10 SINE Alu 26 96 -21 1 1233 1004 95 0 26 chr15 85006207 85006358 -18488616 - B1_Mus2 SINE Alu 0 147 1 2 1233 771 302 67 3 chr15 85006479 85006824 -18488150 + L1MDa LINE L1 2522 2888 -3649 8 1233 1675 127 120 0 chr15 85006945 85007236 -18487738 + ORR1A3 LTR MaLR 1 326 0 2 1233 244 260 70 40 chr15 85007238 85007338 -18487636 + L1MDa LINE L1 2983 3085 -3452 8 1233 413 286 130 53 chr15 85007352 85007614 -18487360 - B4A SINE B4 -9 283 2 2 1233 540 290 147 34 chr15 85007699 85008113 -18486861 - L1MEg LINE L1 -2144 4002 3542 2 1233 307 83 62 0 chr15 85008175 85008223 -18486751 + LSU-rRNA_Hsa rRNA rRNA 2822 2872 -2163 2 1233 368 301 100 97 chr15 85008797 85009106 -18485868 + LTR31 LTR ERV1 292 601 -18 2 1233 507 252 87 0 chr15 85009131 85009258 -18485716 - B1F SINE Alu -4 145 8 2 1233 441 239 103 0 chr15 85009273 85009390 -18485584 - B4A SINE B4 -33 259 131 2 1233 226 268 56 14 chr15 85009422 85009494 -18485480 + B4A SINE B4 65 139 -153 2 1233 355 289 116 8 chr15 85009446 85009575 -18485399 + B1F1 SINE Alu 7 149 0 2 1233 648 253 31 6 chr15 85009584 85009659 -18485315 + ID SINE ID 8 86 -138 3 1233 371 250 94 0 chr15 85009659 85009755 -18485219 + PB1D7 SINE Alu 3 107 -13 3 1233 487 122 22 0 chr15 85010740 85010830 -18484144 + (TC)n Simple_repeat Simple_repeat 1 92 0 3 1233 601 281 26 48 chr15 85010850 85011078 -18483896 - ID_B1 SINE B4 -1 223 1 3 1233 261 57 0 0 chr15 85011558 85011593 -18483381 + (TC)n Simple_repeat Simple_repeat 1 35 0 3 1233 662 260 17 58 chr15 85011594 85011617 -18483357 - ID_B1 SINE B4 -46 246 189 3 1233 901 118 15 0 chr15 85011617 85011753 -18483221 - B1_Mus2 SINE Alu -1 146 9 3 1233 662 260 17 58 chr15 85011753 85011810 -18483164 - ID_B1 SINE B4 -46 188 36 3 1233 226 148 37 0 chr15 85011861 85011915 -18483059 + CT-rich Low_complexity Low_complexity 3 58 0 3 1233 265 272 49 66 chr15 85011916 85012038 -18482936 - L1MEg LINE L1 -5161 1081 962 2 1233 245 316 44 7 chr15 85012105 85012242 -18482732 - L1MEg LINE L1 -5436 806 665 2 1233 189 0 0 0 chr15 85012401 85012422 -18482552 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 3 1233 833 124 14 7 chr15 85012422 85012551 -18482423 - B1_Mur2 SINE Alu -10 139 9 3 1233 813 165 165 0 chr15 85012891 85013073 -18481901 - B3 SINE B2 -4 212 1 4 1233 226 254 51 0 chr15 85013700 85013759 -18481215 + ID_B1 SINE B4 162 223 -1 4 1233 471 202 15 8 chr15 85013759 85013889 -18481085 + G-rich Low_complexity Low_complexity 1 131 0 4 1233 274 312 29 77 chr15 85013955 85014125 -18480849 + MIRb SINE MIR 65 226 -42 4 1233 219 229 82 0 chr15 85014142 85014203 -18480771 - B1_Mus2 SINE Alu 0 147 82 4 1233 683 177 0 9 chr15 85015278 85015392 -18479582 - B3A SINE B2 -85 113 1 4 1233 465 295 22 19 chr15 85015392 85015574 -18479400 - B3A SINE B2 -14 181 1 4 1233 1096 180 31 170 chr15 85015622 85016098 -18478876 + RMER17C LTR ERVK 1 410 0 4 1233 360 228 109 0 chr15 85016143 85016235 -18478739 + PB1D7 SINE Alu 1 102 -18 4 1233 772 258 84 23 chr15 85016897 85017111 -18477863 + B4A SINE B4 1 227 -65 4 1233 544 213 71 39 chr15 85017122 85017249 -18477725 + B3 SINE B2 1 131 -85 5 1233 320 292 11 22 chr15 85017189 85017280 -18477694 - PB1D9 SINE Alu -15 105 16 5 1233 324 0 0 0 chr15 85017280 85017316 -18477658 + (CCA)n Simple_repeat Simple_repeat 1 36 0 5 1233 312 27 0 0 chr15 85017864 85017901 -18477073 + (TTA)n Simple_repeat Simple_repeat 3 39 0 5 1233 519 248 25 57 chr15 85017902 85018060 -18476914 - RSINE1 SINE B4 0 165 13 5 1233 762 116 0 0 chr15 85018186 85018315 -18476659 + (TG)n Simple_repeat Simple_repeat 1 129 0 5 1233 207 0 0 0 chr15 85019332 85019355 -18475619 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1233 446 0 19 0 chr15 85019355 85019408 -18475566 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1233 322 125 0 0 chr15 85019586 85019634 -18475340 - HAL1-3A_ME LINE L1 -836 2022 1975 5 1233 278 215 0 12 chr15 85019634 85019714 -18475260 + (TG)n Simple_repeat Simple_repeat 2 80 0 5 1233 593 230 6 0 chr15 85019726 85019904 -18475070 + (TG)n Simple_repeat Simple_repeat 1 179 0 5 1233 403 224 22 28 chr15 85019921 85020100 -18474874 + (TATG)n Simple_repeat Simple_repeat 1 178 0 6 1233 736 240 85 50 chr15 85020117 85020398 -18474576 - B4A SINE B4 -1 291 1 6 1233 22 35 0 0 chr15 85020451 85020480 -18474494 + AT_rich Low_complexity Low_complexity 1 29 0 6 1233 4257 14 2 0 chr15 85020628 85021120 -18473854 - MT2_Mm LTR ERVL 0 493 1 6 1233 301 0 0 0 chr15 85021120 85021158 -18473816 - MERVL-int LTR ERVL 0 5485 5448 6 1233 377 167 46 35 chr15 85021158 85021245 -18473729 - ORR1A3-int LTR MaLR -1323 640 553 6 1233 39368 16 14 0 chr15 85021245 85026532 -18468442 - MERVL-int LTR ERVL -125 5360 1 6 1233 4257 14 2 0 chr15 85026532 85027024 -18467950 - MT2_Mm LTR ERVL 0 493 1 6 1233 228 195 24 0 chr15 85027185 85027226 -18467748 + tRNA-Ala-GCY_ tRNA tRNA 27 68 -7 6 1233 201 121 0 0 chr15 85027247 85027280 -18467694 + (ATGGTG)n Simple_repeat Simple_repeat 2 34 0 6 1233 716 267 28 0 chr15 85027789 85027965 -18467009 - B3A SINE B2 -17 181 1 6 1233 2342 137 5 5 chr15 85028265 85028648 -18466326 + ORR1B1 LTR MaLR 3 385 -9 6 1233 393 22 0 0 chr15 85028816 85028862 -18466112 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1233 620 286 0 12 chr15 85029379 85029545 -18465429 - B4A SINE B4 -122 170 7 7 1233 269 269 65 0 chr15 85029612 85029705 -18465269 - MLT1B LTR MaLR -291 99 1 7 1233 261 0 0 0 chr15 85031242 85031271 -18463703 + (CTG)n Simple_repeat Simple_repeat 2 30 0 7 1233 862 146 0 0 chr15 85031787 85031924 -18463050 - B1_Mus2 SINE Alu 0 147 11 7 1233 432 194 17 120 chr15 85031833 85031950 -18463024 - MT2B LTR ERVL -345 256 152 7 1233 244 243 29 29 chr15 85031950 85031967 -18463007 - ORR1B1-int LTR MaLR -755 724 615 7 1233 220 358 9 60 chr15 85032045 85032161 -18462813 + L4 LINE RTE 1746 1855 -174 7 1233 743 103 0 0 chr15 85033070 85033177 -18461797 - B1_Mus2 SINE Alu -21 126 20 7 1233 235 203 14 14 chr15 85033566 85033636 -18461338 + CT-rich Low_complexity Low_complexity 1 70 0 7 1233 357 211 78 0 chr15 85033671 85033761 -18461213 - PB1D10 SINE Alu 0 117 21 7 1233 281 319 18 6 chr15 85034155 85034288 -18460686 - MIR SINE MIR -46 162 30 8 1233 312 27 0 0 chr15 85034748 85034785 -18460189 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 8 1233 1021 97 106 28 chr15 85034808 85034988 -18459986 - B2_Mm2 SINE B2 -1 194 1 8 1233 543 293 18 18 chr15 85035001 85035171 -18459803 - ID_B1 SINE B4 -42 182 13 8 1233 490 205 0 93 chr15 85035304 85035444 -18459530 + PB1 SINE Alu 1 127 0 8 1233 457 197 165 0 chr15 85035889 85036016 -18458958 - B1_Mur3 SINE Alu -1 148 1 8 1233 350 290 2 5 chr15 85036037 85036128 -18458846 - B4A SINE B4 -72 93 4 8 1233 33 43 0 0 chr15 85036139 85036186 -18458788 + AT_rich Low_complexity Low_complexity 1 47 0 8 1233 27 0 0 0 chr15 85036415 85036442 -18458532 + GC_rich Low_complexity Low_complexity 1 27 0 8 1233 209 79 79 0 chr15 85039209 85039247 -18455727 + G-rich Low_complexity Low_complexity 1 41 0 8 1233 1757 136 70 99 chr15 85039311 85039695 -18455279 - ORR1D1 LTR MaLR -1 373 1 9 1233 888 225 28 19 chr15 85039880 85040093 -18454881 - B3 SINE B2 0 216 2 9 1233 236 214 37 0 chr15 85040895 85040961 -18454013 - MIR SINE MIR -99 177 103 9 1233 333 241 0 24 chr15 85042600 85042685 -18452289 - B4 SINE B4 -1 291 209 9 1233 186 118 0 0 chr15 85042689 85042723 -18452251 + (TG)n Simple_repeat Simple_repeat 2 35 0 9 1233 663 134 158 0 chr15 85042724 85042851 -18452123 - B3 SINE B2 -68 148 2 9 1233 753 251 57 24 chr15 85042859 85043071 -18451903 - B4A SINE B4 -73 219 1 9 1233 1373 54 5 5 chr15 85043108 85043294 -18451680 + B2_Mm1t SINE B2 1 186 -7 9 1233 248 193 375 0 chr15 85043601 85043689 -18451285 - B3A SINE B2 -77 121 1 9 1233 847 150 0 52 chr15 85043718 85043873 -18451101 - B1_Mur3 SINE Alu -1 148 2 9 1233 729 127 30 0 chr15 85043879 85044013 -18450961 + URR1A DNA MER1_type 79 216 -10 9 1233 388 272 81 12 chr15 85044013 85044039 -18450935 - CYRA11_Mm Unknown Y-chromosome -298 319 149 1 1233 477 109 742 68 chr15 85044462 85044594 -18450380 + URR1A DNA MER1_type 5 225 -1 9 1233 594 154 0 0 chr15 85046497 85046588 -18448386 - PB1D9 SINE Alu -21 99 9 1 1233 344 235 35 12 chr15 85046512 85046598 -18448376 - B4A SINE B4 -123 169 82 1 1233 265 276 35 0 chr15 85046621 85046708 -18448266 - B3 SINE B2 0 216 127 1 1233 1926 117 26 10 chr15 85046718 85047030 -18447944 - ORR1A2 LTR MaLR -9 318 2 1 1233 561 260 0 0 chr15 85047033 85047156 -18447818 - B3 SINE B2 -93 123 1 1 1233 198 91 0 0 chr15 85047163 85047196 -18447778 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1233 446 278 103 4 chr15 85047225 85047461 -18447513 - L1MB3 LINE L1 -3 6180 5915 1 1233 404 228 123 0 chr15 85047487 85047601 -18447373 - RSINE1 SINE B4 -37 128 1 1 1233 226 176 0 19 chr15 85047766 85047818 -18447156 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 1233 273 227 12 107 chr15 85049947 85050031 -18444943 - PB1D10 SINE Alu -1 116 41 1 1233 432 0 0 0 chr15 85050454 85050502 -18444472 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1233 267 215 0 0 chr15 85051209 85051274 -18443700 + (TG)n Simple_repeat Simple_repeat 1 65 0 1 1233 366 233 4 60 chr15 85051278 85051435 -18443539 - B3A SINE B2 -11 184 40 1 1233 187 186 116 0 chr15 85052668 85052711 -18442263 + MIR SINE MIR 63 110 -98 1 1233 414 0 0 0 chr15 85052831 85052877 -18442097 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 1233 3338 23 5 0 chr15 85055691 85056089 -18438885 - MTB LTR MaLR 0 400 1 1 1233 2241 124 52 41 chr15 85056760 85057123 -18437851 - ORR1B2 LTR MaLR 0 367 1 1 1233 819 259 37 120 chr15 85057648 85057705 -18437269 + MER2 DNA MER2_type 18 74 -271 1 1233 968 262 57 28 chr15 85057705 85057988 -18436986 + B4A SINE B4 1 291 -1 1 1233 819 259 37 120 chr15 85057988 85058229 -18436745 + MER2 DNA MER2_type 75 291 -54 1 1233 198 0 0 0 chr15 85058236 85058258 -18436716 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1 1233 1152 58 0 0 chr15 85058273 85058412 -18436562 - B1_Mm SINE Alu -8 139 1 1 1233 763 241 18 0 chr15 85058435 85058605 -18436369 - B3 SINE B2 0 216 44 1 1233 591 200 8 8 chr15 85058592 85058713 -18436261 - B3 SINE B2 -95 121 1 1 1233 469 342 21 62 chr15 85058809 85059049 -18435925 - MLT2D LTR ERVL -113 301 72 1 1233 837 203 36 68 chr15 85059461 85059683 -18435291 - B3 SINE B2 -1 215 1 1 1233 335 341 90 12 chr15 85063187 85063353 -18431621 - MER58A DNA MER1_type -28 196 18 1 1233 213 39 0 0 chr15 85064692 85064718 -18430256 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1233 520 261 42 0 chr15 85064999 85065141 -18429833 + B1F SINE Alu 1 148 -1 1 1233 3345 43 7 15 chr15 85065270 85065673 -18429301 - MTB LTR MaLR 0 400 1 1 1234 3493 30 5 2 chr15 85066466 85066864 -18428110 - MTB LTR MaLR 0 400 2 1 1234 520 349 30 10 chr15 85066936 85067136 -18427838 - MER58A DNA MER1_type 0 224 21 1 1234 225 0 0 0 chr15 85068209 85068234 -18426740 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 1234 252 342 44 26 chr15 85069906 85070020 -18424954 - MER67B LTR ERV1 -508 153 38 1 1234 518 279 84 39 chr15 85070376 85070555 -18424419 - MER58A DNA MER1_type -8 216 30 1 1234 345 47 0 0 chr15 85071340 85071383 -18423591 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 1234 186 222 0 0 chr15 85071709 85071763 -18423211 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1234 220 254 95 0 chr15 85071809 85071872 -18423102 - ID2 SINE ID -9 74 6 1 1234 203 265 14 14 chr15 85072194 85072263 -18422711 + MIR SINE MIR 71 139 -69 1 1234 242 338 36 65 chr15 85073304 85073443 -18421531 + B4A SINE B4 156 290 -2 1 1234 258 105 0 0 chr15 85073467 85073505 -18421469 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1234 207 0 0 0 chr15 85073522 85073545 -18421429 + (CAG)n Simple_repeat Simple_repeat 1 23 0 1 1234 538 199 149 35 chr15 85073719 85073860 -18421114 + RSINE1 SINE B4 3 159 -6 1 1234 182 313 145 0 chr15 85074261 85074344 -18420630 + MIRb SINE MIR 80 174 -94 1 1234 320 347 6 89 chr15 85075575 85075733 -18419241 + ID_B1 SINE B4 32 176 -48 1 1234 428 226 39 0 chr15 85075649 85075751 -18419223 + PB1D7 SINE Alu 11 116 -4 1 1234 304 302 0 11 chr15 85077605 85077692 -18417282 + ID_B1 SINE B4 81 166 -58 1 1234 299 319 35 17 chr15 85077606 85077721 -18417253 + PB1D10 SINE Alu 1 117 0 1 1234 772 289 86 19 chr15 85077728 85077996 -18416978 + B4A SINE B4 2 287 -5 1 1234 202 219 41 0 chr15 85078018 85078091 -18416883 + (CATATA)n Simple_repeat Simple_repeat 4 79 0 1 1234 360 118 0 0 chr15 85078194 85078262 -18416712 + (TC)n Simple_repeat Simple_repeat 2 69 0 1 1234 549 42 0 0 chr15 85078830 85078902 -18416072 + (CA)n Simple_repeat Simple_repeat 2 73 0 1 1234 767 184 20 20 chr15 85079050 85079366 -18415608 + CT-rich Low_complexity Low_complexity 1 316 0 1 1234 687 92 0 0 chr15 85079369 85079467 -18415507 - B1_Mur3 SINE Alu -6 143 46 1 1234 297 214 67 67 chr15 85079408 85079513 -18415461 - MT2B LTR ERVL -344 257 153 1 1234 704 157 17 4 chr15 85079938 85080169 -18414805 + (TG)n Simple_repeat Simple_repeat 1 234 0 1 1234 197 224 41 0 chr15 85082962 85083011 -18411963 - MIRc SINE MIR -143 125 75 1 1234 381 43 0 0 chr15 85083246 85083293 -18411681 + (CTATT)n Simple_repeat Simple_repeat 1 47 0 1 1234 755 217 149 0 chr15 85083304 85083479 -18411495 - B3 SINE B2 -3 213 13 1 1234 1264 78 0 119 chr15 85084057 85084276 -18410698 - B2_Mm2 SINE B2 -1 194 2 1 1234 231 364 69 28 chr15 85084342 85084486 -18410488 + L2b LINE L2 3225 3374 -1 1 1234 1979 151 40 11 chr15 85084511 85084860 -18410114 - ORR1B2 LTR MaLR -8 359 1 1 1234 210 329 52 3 chr15 85085230 85085380 -18409594 + L2c LINE L2 3064 3225 -201 1 1234 558 0 0 0 chr15 85086173 85086235 -18408739 + (TC)n Simple_repeat Simple_repeat 1 62 0 1 1234 333 0 0 0 chr15 85086235 85086271 -18408703 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1234 268 308 54 40 chr15 85086398 85086547 -18408427 - MLT1C LTR MaLR -158 309 159 1 1234 22 0 0 0 chr15 85086568 85086590 -18408384 + AT_rich Low_complexity Low_complexity 1 22 0 1 1234 1129 105 23 0 chr15 85086594 85086766 -18408208 + B2_Mm2 SINE B2 2 177 -18 1 1234 531 252 48 51 chr15 85086833 85087069 -18407905 + MTD LTR MaLR 1 277 -142 1 1234 22 0 0 0 chr15 85087392 85087414 -18407560 + AT_rich Low_complexity Low_complexity 1 22 0 1 1234 25 0 0 0 chr15 85087526 85087551 -18407423 + AT_rich Low_complexity Low_complexity 1 25 0 1 1234 689 82 10 0 chr15 85087555 85087652 -18407322 + B2_Mm2 SINE B2 2 99 -96 1 1234 225 330 40 0 chr15 85087652 85087752 -18407222 + L1M7 LINE L1 1299 1402 -4816 1 1234 977 264 53 79 chr15 85087756 85088135 -18406839 + MTEa LTR MaLR 3 371 -8 1 1234 765 188 271 0 chr15 85088573 85088743 -18406231 + B3 SINE B2 1 216 0 1 1234 633 235 0 0 chr15 85089211 85089390 -18405584 + (TG)n Simple_repeat Simple_repeat 1 179 0 1 1234 749 286 10 39 chr15 85089442 85089646 -18405328 - B3A SINE B2 0 198 1 1 1234 748 270 89 53 chr15 85090693 85091030 -18403944 - ORR1E LTR MaLR 0 359 11 1 1234 786 181 121 0 chr15 85091256 85091422 -18403552 - MTD LTR MaLR -5 414 229 1 1234 357 174 0 0 chr15 85091425 85091494 -18403480 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 1 1234 1121 178 4 84 chr15 85091497 85091541 -18403433 - MTD LTR MaLR -195 224 192 1 1234 741 194 0 59 chr15 85091541 85091681 -18403293 + B1_Mm SINE Alu 1 134 -13 1 1234 195 42 0 0 chr15 85091681 85091705 -18403269 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 1234 741 194 0 59 chr15 85091705 85091717 -18403257 + B1_Mm SINE Alu 135 144 -3 1 1234 1121 178 4 84 chr15 85091717 85091911 -18403063 - MTD LTR MaLR -228 191 5 1 1234 388 246 24 7 chr15 85092390 85092487 -18402487 - PB1D10 SINE Alu 0 127 24 1 1234 198 150 0 0 chr15 85092582 85092622 -18402352 + (TTGG)n Simple_repeat Simple_repeat 4 43 0 1 1234 898 164 14 0 chr15 85092622 85092768 -18402206 - B1_Mur4 SINE Alu -2 148 1 1 1234 186 133 0 0 chr15 85092796 85092826 -18402148 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1234 213 121 0 0 chr15 85092874 85092907 -18402067 + (TCC)n Simple_repeat Simple_repeat 3 35 0 1 1234 634 221 132 42 chr15 85092918 85093107 -18401867 - B3 SINE B2 0 216 11 1 1234 1129 103 21 16 chr15 85094887 85095074 -18399900 - B2_Mm2 SINE B2 -1 194 7 1 1234 268 250 40 40 chr15 85095180 85095280 -18399694 - MIR3 SINE MIR -98 178 79 1 1234 387 41 0 0 chr15 85095583 85095632 -18399342 + (GAGTG)n Simple_repeat Simple_repeat 3 51 0 1 1234 224 255 51 102 chr15 85096146 85096264 -18398710 + MIR3 SINE MIR 14 125 -83 1 1234 1529 58 5 16 chr15 85096697 85096891 -18398083 - B2_Mm1a SINE B2 -1 192 1 1 1234 1187 93 17 23 chr15 85096936 85097111 -18397863 - B2_Mm2 SINE B2 -17 178 5 1 1234 252 59 0 0 chr15 85097236 85097270 -18397704 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1234 620 326 210 11 chr15 85101802 85102328 -18392646 - MER54A LTR ERVL -263 638 7 1 1234 297 27 0 0 chr15 85102485 85102522 -18392452 - U2 snRNA snRNA -151 37 1 1 1234 253 300 0 0 chr15 85103196 85103256 -18391718 - MER91C DNA Tip100 0 140 81 1 1234 186 308 48 0 chr15 85105538 85105642 -18389332 - L2a LINE L2 -288 3138 3030 1 1234 1812 213 95 15 chr15 85106643 85107052 -18387922 + RMER10A LTR ERVL 1 442 0 1 1234 286 346 136 28 chr15 85107056 85107270 -18387704 - MTEb LTR MaLR -25 354 118 1 1234 242 256 25 25 chr15 85107610 85107690 -18387284 + MIRc SINE MIR 55 134 -134 2 1234 1149 186 28 14 chr15 85108205 85108418 -18386556 - B3 SINE B2 0 216 1 2 1234 357 24 0 0 chr15 85110170 85110212 -18384762 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1234 204 288 37 24 chr15 85110219 85110301 -18384673 + (CATG)n Simple_repeat Simple_repeat 3 85 0 2 1234 910 242 75 41 chr15 85110303 85110570 -18384404 - B4 SINE B4 -11 281 6 2 1234 293 290 0 20 chr15 85110727 85110829 -18384145 - Lx7 LINE L1 -19 7677 7578 2 1234 1410 262 63 18 chr15 85110843 85111289 -18383685 - Lx7 LINE L1 -334 7362 6897 2 1234 278 257 0 26 chr15 85111997 85112073 -18382901 + (TGGA)n Simple_repeat Simple_repeat 1 74 0 2 1234 693 99 25 0 chr15 85112089 85112210 -18382764 + (TGGA)n Simple_repeat Simple_repeat 3 126 0 2 1234 351 0 0 0 chr15 85112978 85113017 -18381957 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1234 353 180 16 16 chr15 85113017 85113079 -18381895 - ID2 SINE ID -11 72 11 2 1234 597 253 0 78 chr15 85113091 85113258 -18381716 - ID_B1 SINE B4 -4 220 67 2 1234 233 154 0 0 chr15 85113272 85113311 -18381663 - MIRm SINE MIR -133 143 105 2 1234 216 0 0 0 chr15 85113446 85113470 -18381504 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 1234 442 259 25 17 chr15 85113476 85113594 -18381380 - RSINE1 SINE B4 -45 120 2 2 1234 498 318 47 0 chr15 85113813 85113942 -18381032 + ID_B1 SINE B4 81 215 -9 2 1234 573 194 12 6 chr15 85114023 85114184 -18380790 + (TA)n Simple_repeat Simple_repeat 1 162 0 2 1234 576 216 159 40 chr15 85114184 85114361 -18380613 - B3A SINE B2 -13 180 1 2 1234 258 246 0 0 chr15 85116664 85116721 -18378253 - MLT1A LTR MaLR -16 392 336 2 1234 291 250 0 126 chr15 85116884 85117003 -18377971 - MLT1A LTR MaLR -251 123 20 2 1234 183 333 28 0 chr15 85117321 85117393 -18377581 - MIR SINE MIR -164 98 25 2 1234 276 271 39 78 chr15 85117917 85118045 -18376929 - ORR1E LTR MaLR -164 195 73 2 1234 230 248 132 63 chr15 85118611 85118770 -18376204 + MLT1H-int LTR MaLR 1219 1388 -21 2 1234 298 341 74 42 chr15 85118771 85118961 -18376013 + RMER15 LTR ERVL 322 517 -58 2 1234 230 218 0 35 chr15 85119128 85119185 -18375789 + (ATAGG)n Simple_repeat Simple_repeat 2 56 0 2 1234 807 240 47 6 chr15 85119798 85119970 -18375004 - B3A SINE B2 -19 179 1 2 1234 278 234 0 0 chr15 85121182 85121246 -18373728 + (CGGGG)n Simple_repeat Simple_repeat 1 64 0 2 1234 1406 146 9 22 chr15 85121554 85121778 -18373196 - URR1B DNA MER1_type -4 221 1 2 1234 312 164 0 18 chr15 85122050 85122106 -18372868 + HAL1-3A_ME LINE L1 1964 2018 -840 2 1234 856 152 12 0 chr15 85122108 85122273 -18372701 + (CA)n Simple_repeat Simple_repeat 1 167 0 2 1234 405 184 18 9 chr15 85122814 85122924 -18372050 + (CA)n Simple_repeat Simple_repeat 1 111 0 2 1234 212 227 70 57 chr15 85123129 85123231 -18371743 - B1F1 SINE Alu 0 149 2 2 1234 1091 90 0 7 chr15 85123371 85123508 -18371466 + B1_Mus2 SINE Alu 1 137 -10 2 1234 207 0 0 0 chr15 85123508 85123531 -18371443 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1234 209 280 160 8 chr15 85123572 85123691 -18371283 + L4 LINE RTE 1784 1920 -109 2 1234 222 37 0 0 chr15 85123736 85123763 -18371211 + (TC)n Simple_repeat Simple_repeat 2 28 0 2 1234 1045 22 15 0 chr15 85123763 85123898 -18371076 + (TG)n Simple_repeat Simple_repeat 1 138 0 2 1234 908 154 7 0 chr15 85123906 85124049 -18370925 - B3 SINE B2 -72 144 1 2 1234 243 0 0 0 chr15 85124066 85124093 -18370881 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2 1234 258 289 0 0 chr15 85124093 85124145 -18370829 - ID4 SINE ID -30 53 2 2 1234 648 26 0 0 chr15 85124152 85124230 -18370744 + (TC)n Simple_repeat Simple_repeat 2 79 0 2 1234 347 208 125 0 chr15 85124240 85124312 -18370662 - B1_Mus2 SINE Alu -15 132 52 2 1234 274 226 0 0 chr15 85124371 85124424 -18370550 - PB1D10 SINE Alu -64 53 1 2 1234 1102 57 14 0 chr15 85124490 85124630 -18370344 - B1_Mus1 SINE Alu 0 148 7 2 1234 464 244 47 63 chr15 85124535 85124662 -18370312 - MT2B LTR ERVL -344 257 133 2 1234 551 288 0 0 chr15 85124649 85124760 -18370214 - B1F SINE Alu -29 120 10 2 1234 417 280 75 15 chr15 85124881 85125015 -18369959 + B1F1 SINE Alu 1 142 -7 2 1234 650 322 65 59 chr15 85125026 85125316 -18369658 + B4A SINE B4 1 292 0 2 1234 234 0 0 0 chr15 85125348 85125374 -18369600 + (GA)n Simple_repeat Simple_repeat 2 27 0 2 1234 388 77 0 0 chr15 85125380 85125432 -18369542 + B3A SINE B2 3 54 -144 2 1234 703 248 52 0 chr15 85125516 85125669 -18369305 + RSINE1 SINE B4 5 165 0 2 1234 828 196 0 0 chr15 85125690 85125869 -18369105 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 1234 206 235 81 45 chr15 85126713 85126824 -18368150 + MIRb SINE MIR 7 124 -144 2 1234 247 337 33 0 chr15 85126901 85126993 -18367981 - LTR75 LTR ERVL -31 531 437 2 1234 744 266 6 0 chr15 85127153 85127311 -18367663 - RSINE1 SINE B4 -5 160 2 2 1234 269 244 41 112 chr15 85127344 85127639 -18367335 + RMER17D LTR ERVK 271 544 -345 2 1234 441 238 17 27 chr15 85127544 85127659 -18367315 - B1F SINE Alu -6 121 1 2 1234 572 284 88 4 chr15 85127769 85127995 -18366979 - L1MEg LINE L1 -3194 2952 2708 2 1234 341 358 62 62 chr15 85128066 85128373 -18366601 - L1MEg LINE L1 -4474 1768 1462 2 1234 339 239 91 0 chr15 85128373 85128461 -18366513 - U6 snRNA snRNA 0 107 12 2 1234 372 216 0 0 chr15 85129821 85129923 -18365051 + (TG)n Simple_repeat Simple_repeat 1 102 0 2 1234 567 253 117 89 chr15 85129982 85130164 -18364810 - B4A SINE B4 -2 290 109 2 1234 615 27 0 0 chr15 85130164 85130237 -18364737 + (CAGGG)n Simple_repeat Simple_repeat 2 74 0 2 1234 567 253 117 89 chr15 85130237 85130336 -18364638 - B4A SINE B4 -184 108 3 2 1234 752 113 0 56 chr15 85130408 85130765 -18364209 + G-rich Low_complexity Low_complexity 1 337 0 2 1234 424 188 0 24 chr15 85130941 85131023 -18363951 - PB1 SINE Alu -4 123 44 2 1234 438 220 25 12 chr15 85131369 85131621 -18363353 + G-rich Low_complexity Low_complexity 1 255 0 2 1234 1161 184 14 41 chr15 85132241 85132462 -18362512 + B3 SINE B2 1 215 -1 2 1234 250 194 89 89 chr15 85132481 85132560 -18362414 + ID4_ SINE ID 3 81 -2 2 1234 640 119 40 15 chr15 85132601 85132875 -18362099 + (TAGA)n Simple_repeat Simple_repeat 1 280 0 2 1234 354 195 0 0 chr15 85132964 85133041 -18361933 + (TAGA)n Simple_repeat Simple_repeat 1 77 0 2 1234 270 299 72 7 chr15 85133194 85133332 -18361642 + MIRc SINE MIR 6 152 -116 2 1234 377 226 12 12 chr15 85134035 85134120 -18360854 + RSINE1 SINE B4 25 109 -56 2 1234 1257 254 127 39 chr15 85134144 85134542 -18360432 + L1MA4 LINE L1 5282 5722 -578 2 1234 2672 112 5 5 chr15 85134542 85134920 -18360054 + ORR1C1 LTR MaLR 1 378 0 2 1234 1257 254 127 39 chr15 85134920 85135118 -18359856 + L1MA4 LINE L1 5723 5931 -369 2 1234 463 271 116 0 chr15 85135759 85135888 -18359086 + ID_B1 SINE B4 81 224 0 2 1234 651 201 0 0 chr15 85136049 85136213 -18358761 + (CA)n Simple_repeat Simple_repeat 1 164 0 2 1234 612 186 18 0 chr15 85136226 85136393 -18358581 + (CA)n Simple_repeat Simple_repeat 2 171 0 2 1234 307 260 50 58 chr15 85136395 85136534 -18358440 + HAL1-3A_ME LINE L1 1976 2113 -745 2 1234 1431 48 0 0 chr15 85137242 85137449 -18357525 + (TG)n Simple_repeat Simple_repeat 1 207 0 2 1234 347 289 106 31 chr15 85137498 85137659 -18357315 + MIRb SINE MIR 36 208 -68 2 1234 1311 231 101 13 chr15 85137743 85138050 -18356924 + ORR1E LTR MaLR 1 334 -25 2 1234 198 0 0 0 chr15 85138057 85138079 -18356895 + (GTTTG)n Simple_repeat Simple_repeat 2 23 0 2 1234 1826 143 25 81 chr15 85138089 85138447 -18356527 - ORR1B1 LTR MaLR -8 386 49 2 1234 278 283 71 50 chr15 85138534 85138702 -18356272 - MIR SINE MIR -92 184 8 2 1234 767 194 30 7 chr15 85139164 85139299 -18355675 + B1_Mur1 SINE Alu 1 138 -11 2 1234 264 224 0 58 chr15 85139326 85139412 -18355562 - B1_Mur2 SINE Alu -2 147 72 2 1234 2386 90 6 59 chr15 85139450 85139791 -18355183 + ORR1A2 LTR MaLR 5 327 0 2 1234 1850 233 79 10 chr15 85140206 85140688 -18354286 + Lx8 LINE L1 6516 7030 -443 2 1234 625 257 110 7 chr15 85140714 85140859 -18354115 + B3 SINE B2 1 160 -56 2 1234 837 249 6 6 chr15 85140854 85141020 -18353954 - B3 SINE B2 -48 168 3 2 1234 234 62 0 0 chr15 85141993 85142025 -18352949 + (T)n Simple_repeat Simple_repeat 1 32 0 2 1234 257 266 92 61 chr15 85142610 85142774 -18352200 + MIRm SINE MIR 3 184 -84 2 1234 658 345 10 0 chr15 85144257 85144457 -18350517 + ID_B1 SINE B4 21 222 -2 2 1234 245 27 54 0 chr15 85144606 85144643 -18350331 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 2 1234 186 250 0 0 chr15 85144659 85144715 -18350259 + GA-rich Low_complexity Low_complexity 2 57 0 2 1234 362 266 50 58 chr15 85145618 85145738 -18349236 - MER20 DNA MER1_type -93 126 8 2 1234 360 117 26 13 chr15 85146092 85146170 -18348804 + CT-rich Low_complexity Low_complexity 5 83 0 2 1234 234 0 0 0 chr15 85146336 85146362 -18348612 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 2 1234 299 277 170 0 chr15 85147773 85147867 -18347107 + PB1D10 SINE Alu 1 110 -7 2 1234 992 196 8 0 chr15 85147875 85148122 -18346852 + GA-rich Low_complexity Low_complexity 1 249 0 2 1234 1149 50 0 7 chr15 85148233 85148374 -18346600 + B1_Mm SINE Alu 2 141 -6 2 1234 954 26 0 0 chr15 85148375 85148488 -18346486 + (GAA)n Simple_repeat Simple_repeat 3 115 0 2 1234 284 282 82 0 chr15 85148488 85148573 -18346401 - MIRc SINE MIR -63 205 114 2 1234 1190 275 42 151 chr15 85148678 85149256 -18345718 + MER44D DNA MER2_type 16 536 -169 2 1234 517 299 13 20 chr15 85149256 85149406 -18345568 - B1F1 SINE Alu 0 149 1 2 1234 1190 275 42 151 chr15 85149406 85149594 -18345380 + MER44D DNA MER2_type 537 698 -7 2 1234 180 281 17 17 chr15 85149749 85149807 -18345167 - MIRb SINE MIR -185 83 26 3 1234 1205 55 0 7 chr15 85150125 85150263 -18344711 + B1_Mus2 SINE Alu 2 139 -8 3 1234 180 0 0 0 chr15 85150263 85150283 -18344691 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1234 1189 83 0 11 chr15 85151131 85151313 -18343661 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1234 208 293 11 79 chr15 85151330 85151419 -18343555 - MIR SINE MIR -55 153 71 3 1234 945 141 0 0 chr15 85151436 85151578 -18343396 - B1_Mus2 SINE Alu 0 147 6 3 1234 1666 216 35 42 chr15 85151654 85151985 -18342989 - MTEb LTR MaLR -1 378 51 3 1234 2113 169 27 79 chr15 85151985 85152201 -18342773 - MTC LTR MaLR -1 420 203 3 1234 821 84 0 8 chr15 85152201 85152321 -18342653 + (TTCC)n Simple_repeat Simple_repeat 2 120 0 3 1234 2113 169 27 79 chr15 85152321 85152332 -18342642 - MTC LTR MaLR -219 202 202 3 1234 1268 70 52 6 chr15 85152332 85152504 -18342470 - B2_Mm2 SINE B2 -14 181 2 3 1234 2113 169 27 79 chr15 85152504 85152718 -18342256 - MTC LTR MaLR -219 202 1 3 1234 1666 216 35 42 chr15 85152718 85152763 -18342211 - MTEb LTR MaLR -329 50 5 3 1234 1447 69 26 0 chr15 85152957 85153146 -18341828 + B2_Mm2 SINE B2 2 195 0 3 1234 1370 147 105 31 chr15 85153435 85153729 -18341245 + RLTR11A2 LTR ERVK 1 316 -211 3 1234 681 271 31 15 chr15 85153980 85154175 -18340799 - B3A SINE B2 0 198 1 3 1234 23 0 0 0 chr15 85154193 85154216 -18340758 + AT_rich Low_complexity Low_complexity 1 23 0 3 1234 221 246 0 0 chr15 85154419 85154484 -18340490 + T-rich Low_complexity Low_complexity 1 65 0 3 1234 1097 64 14 0 chr15 85154484 85154625 -18340349 - B1_Mus2 SINE Alu 0 147 5 3 1234 1009 269 40 121 chr15 85154723 85155204 -18339770 + MLT1D LTR MaLR 1 442 -63 3 1234 969 228 14 41 chr15 85155210 85155430 -18339544 - B3 SINE B2 -2 214 1 3 1234 249 33 0 0 chr15 85155461 85155491 -18339483 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1234 627 203 21 21 chr15 85155877 85156018 -18338956 - RMER1C Other Other -2 1340 1200 3 1234 408 179 0 0 chr15 85156024 85156102 -18338872 + GA-rich Low_complexity Low_complexity 1 78 0 3 1234 718 227 23 56 chr15 85156104 85156319 -18338655 - RMER1C Other Other -116 1226 1019 3 1234 396 200 0 0 chr15 85156341 85156426 -18338548 + (TG)n Simple_repeat Simple_repeat 1 85 0 3 1234 755 234 0 0 chr15 85156426 85156563 -18338411 - B1_Mur1 SINE Alu -11 138 2 3 1234 366 205 51 0 chr15 85156607 85156685 -18338289 + PB1D10 SINE Alu 36 117 0 3 1234 364 250 147 51 chr15 85156749 85156905 -18338069 - L1MB5 LINE L1 -171 6003 5833 3 1234 367 250 39 54 chr15 85157399 85157602 -18337372 - RMER17C LTR ERVK -135 275 76 3 1234 1053 143 65 16 chr15 85157633 85157818 -18337156 - B2_Mm2 SINE B2 -1 194 1 3 1234 424 209 23 23 chr15 85157912 85158000 -18336974 - PB1D10 SINE Alu 0 117 30 3 1234 257 339 35 9 chr15 85158156 85158272 -18336702 - L1M5 LINE L1 -563 5881 5763 3 1234 404 308 84 36 chr15 85158393 85158707 -18336267 - L1MEe LINE L1 -4634 1374 1030 3 1234 1620 0 0 4 chr15 85158710 85158990 -18335984 + (TCTCCC)n Simple_repeat Simple_repeat 1 278 0 3 1234 779 181 147 13 chr15 85158995 85159195 -18335779 - B3 SINE B2 -3 213 6 3 1234 453 36 0 0 chr15 85159202 85159257 -18335717 + (TC)n Simple_repeat Simple_repeat 2 56 0 3 1234 910 68 68 0 chr15 85159398 85159517 -18335457 + B1_Mus1 SINE Alu 6 124 -24 3 1234 207 0 0 0 chr15 85159517 85159540 -18335434 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1234 910 68 68 0 chr15 85159540 85159553 -18335421 + B1_Mus1 SINE Alu 125 146 -2 3 1234 297 287 188 7 chr15 85159598 85159742 -18335232 - MTD LTR MaLR -199 220 51 3 1234 1042 229 184 48 chr15 85159912 85160228 -18334746 + MTD LTR MaLR 47 405 -14 3 1234 423 0 0 0 chr15 85160405 85160452 -18334522 + (TTCC)n Simple_repeat Simple_repeat 2 48 0 3 1234 378 0 0 0 chr15 85160452 85160494 -18334480 + (TC)n Simple_repeat Simple_repeat 1 42 0 3 1234 333 0 0 0 chr15 85160775 85160812 -18334162 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1234 215 302 81 45 chr15 85160961 85161072 -18333902 - L2a LINE L2 0 3426 3312 3 1234 222 37 0 0 chr15 85161102 85161129 -18333845 + (TAA)n Simple_repeat Simple_repeat 1 27 0 3 1234 1189 61 0 0 chr15 85161252 85161399 -18333575 - B1_Mus2 SINE Alu 0 147 1 3 1234 1383 229 114 3 chr15 85161403 85161701 -18333273 + MTD LTR MaLR 53 383 -36 3 1234 236 247 36 72 chr15 85161797 85161880 -18333094 + B1F2 SINE Alu 1 80 -69 3 1234 250 319 29 0 chr15 85161925 85161994 -18332980 + ID2 SINE ID 2 72 -11 3 1234 643 208 63 140 chr15 85162028 85162235 -18332739 + B3 SINE B2 1 191 -4 3 1234 1050 57 50 7 chr15 85162520 85162661 -18332313 - B1_Mus1 SINE Alu 0 148 2 3 1234 1861 169 157 6 chr15 85162799 85163163 -18331811 + MTC LTR MaLR 1 419 -2 3 1234 326 186 17 0 chr15 85163276 85163335 -18331639 - MTC LTR MaLR -210 211 152 3 1234 589 89 34 45 chr15 85163335 85163512 -18331462 + (TCTA)n Simple_repeat Simple_repeat 1 175 0 3 1234 468 0 0 0 chr15 85163525 85163577 -18331397 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 3 1234 211 254 55 0 chr15 85163666 85163721 -18331253 + L2c LINE L2 3330 3387 0 3 1234 1860 164 60 50 chr15 85164076 85164168 -18330806 + ORR1C2 LTR MaLR 1 88 -296 3 1234 1198 68 0 0 chr15 85164168 85164315 -18330659 + B1_Mm SINE Alu 1 147 0 3 1234 1860 164 60 50 chr15 85164315 85164602 -18330372 + ORR1C2 LTR MaLR 89 384 0 3 1234 180 0 0 0 chr15 85165027 85165047 -18329927 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 1234 1851 125 72 83 chr15 85165144 85165492 -18329482 + ORR1B1 LTR MaLR 42 385 -9 3 1234 346 207 42 0 chr15 85165501 85165579 -18329395 - B2_Mm2 SINE B2 -135 81 1 3 1234 1115 260 131 6 chr15 85165629 85165950 -18329024 + MTE2b LTR MaLR 10 370 -9 3 1234 270 56 0 0 chr15 85167064 85167100 -18327874 + (GGCTG)n Simple_repeat Simple_repeat 3 38 0 3 1234 264 308 8 62 chr15 85167540 85167668 -18327306 + MIRb SINE MIR 119 239 -29 3 1234 180 0 0 0 chr15 85167805 85167825 -18327149 + (TGGGGG)n Simple_repeat Simple_repeat 5 24 0 3 1234 411 248 8 49 chr15 85167875 85167998 -18326976 + PB1D9 SINE Alu 2 119 -1 3 1234 1498 53 11 0 chr15 85168005 85168193 -18326781 + B2_Mm1a SINE B2 2 191 -2 3 1234 213 65 0 0 chr15 85168460 85168491 -18326483 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1234 339 239 7 0 chr15 85168597 85168674 -18326300 + B3 SINE B2 45 126 -67 3 1234 393 200 281 13 chr15 85169377 85169521 -18325453 - B2_Mm2 SINE B2 -19 176 12 3 1234 234 0 0 0 chr15 85169521 85169547 -18325427 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 1234 1307 148 13 9 chr15 85169563 85169788 -18325186 - URR1A DNA MER1_type 0 226 1 3 1234 971 51 14 35 chr15 85170270 85170399 -18324575 + B1_Mus1 SINE Alu 9 137 -11 3 1234 252 0 0 0 chr15 85170399 85170427 -18324547 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 3 1234 971 51 14 35 chr15 85170427 85170440 -18324534 + B1_Mus1 SINE Alu 138 148 0 3 1234 380 281 131 46 chr15 85170457 85170757 -18324217 + L1M5 LINE L1 5188 5527 -644 3 1234 291 306 0 0 chr15 85170757 85170829 -18324145 - ID4_ SINE ID -9 74 3 3 1234 382 254 12 12 chr15 85170829 85170938 -18324036 + L1M5 LINE L1 5494 5609 -562 3 1234 260 268 92 107 chr15 85170963 85171235 -18323739 + L1MB4 LINE L1 5905 6172 -8 3 1234 257 218 63 13 chr15 85171260 85171339 -18323635 + L1MB8 LINE L1 6095 6177 -1 3 1234 304 234 52 0 chr15 85171390 85171463 -18323511 + B1F SINE Alu 56 132 -17 3 1234 634 237 47 73 chr15 85171463 85171654 -18323320 + B3 SINE B2 3 188 -28 3 1234 540 281 202 21 chr15 85171749 85172278 -18322696 + L1ME2 LINE L1 5455 6078 -86 3 1234 332 238 230 78 chr15 85172426 85172622 -18322352 + B4 SINE B4 1 232 -60 3 1234 1420 192 116 50 chr15 85172652 85173014 -18321960 - MTD LTR MaLR 0 419 34 3 1234 447 19 0 0 chr15 85173340 85173392 -18321582 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 1234 234 0 0 0 chr15 85174103 85174129 -18320845 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 1234 356 274 0 12 chr15 85174151 85174236 -18320738 - RSINE1 SINE B4 -72 93 10 3 1234 261 0 0 0 chr15 85174866 85174895 -18320079 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 1234 621 27 0 0 chr15 85175034 85175109 -18319865 + (GGGA)n Simple_repeat Simple_repeat 2 76 0 3 1234 297 263 126 0 chr15 85175109 85175204 -18319770 - RSINE1 SINE B4 -48 117 11 3 1234 2543 74 118 6 chr15 85175385 85175570 -18319404 - MTB_Mm LTR MaLR 0 407 197 3 1234 264 30 0 0 chr15 85175570 85175603 -18319371 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1234 1143 71 0 0 chr15 85175603 85175744 -18319230 - B1_Mus1 SINE Alu -7 141 1 3 1234 2543 74 118 6 chr15 85175744 85175923 -18319051 - MTB_Mm LTR MaLR -211 196 2 3 1234 712 213 173 106 chr15 85176004 85176345 -18318629 - MTEa LTR MaLR -7 372 9 3 1234 234 309 15 0 chr15 85176540 85176608 -18318366 + ORR1E LTR MaLR 1 69 -290 3 1234 944 126 131 34 chr15 85176758 85176964 -18318010 - URR1A DNA MER1_type 0 226 1 3 1234 187 269 39 0 chr15 85178161 85178213 -18316761 + MIR SINE MIR 188 241 -21 3 1234 393 255 226 43 chr15 85178563 85178727 -18316247 - B3A SINE B2 -3 195 2 3 1234 416 268 27 0 chr15 85178737 85178849 -18316125 - PB1D10 SINE Alu -2 115 1 3 1234 190 336 119 33 chr15 85178898 85179049 -18315925 + L2 LINE L2 682 845 -2574 3 1234 1027 72 72 0 chr15 85179121 85179259 -18315715 - B1_Mus1 SINE Alu 0 148 1 3 1234 493 199 38 8 chr15 85179612 85179744 -18315230 - L1MA7 LINE L1 -1 6290 6155 3 1234 2576 271 80 56 chr15 85179851 85180891 -18314083 + Lx5 LINE L1 5973 7046 -4 3 1234 777 140 87 14 chr15 85180999 85181137 -18313837 + B1_Mur3 SINE Alu 2 149 0 3 1234 204 111 0 0 chr15 85181139 85181175 -18313799 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 4 1234 758 186 228 23 chr15 85181294 85181465 -18313509 - B3 SINE B2 -10 206 1 4 1234 883 209 27 32 chr15 85181496 85181684 -18313290 - U2 snRNA snRNA -1 187 1 4 1234 3890 226 72 57 chr15 85181834 85181963 -18313011 - RMER1B Other Other 0 1066 930 4 1234 714 60 0 0 chr15 85181963 85182063 -18312911 + (CA)n Simple_repeat Simple_repeat 2 101 0 4 1234 3890 226 72 57 chr15 85182063 85182982 -18311992 - RMER1B Other Other -137 929 2 4 1234 216 0 0 0 chr15 85183245 85183269 -18311705 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1234 646 252 59 78 chr15 85183274 85183600 -18311374 - L1M3 LINE L1 -689 5611 5296 4 1234 732 283 133 50 chr15 85183628 85183701 -18311273 - L1M3 LINE L1 -964 5179 5106 4 1234 276 30 0 0 chr15 85183701 85183734 -18311240 + (TGGGGG)n Simple_repeat Simple_repeat 1 33 0 4 1234 732 283 133 50 chr15 85183734 85183827 -18311147 - L1M3 LINE L1 -1038 5105 5026 4 1234 1092 36 65 0 chr15 85183827 85183965 -18311009 - B1_Mus2 SINE Alu 0 147 1 4 1234 772 283 133 50 chr15 85183965 85184482 -18310492 - L1M3 LINE L1 -1118 5025 4435 4 1234 249 288 14 14 chr15 85184906 85184980 -18309994 + Cheshire DNA MER1_type 28 101 -2319 4 1234 1094 52 0 0 chr15 85185046 85185181 -18309793 - B1_Mus1 SINE Alu -12 136 2 4 1234 669 191 38 8 chr15 85185332 85185464 -18309510 - B1_Mus2 SINE Alu 0 147 12 4 1234 676 247 25 6 chr15 85185537 85185700 -18309274 - B3A SINE B2 -30 168 3 4 1234 28 0 0 0 chr15 85185930 85185958 -18309016 + AT_rich Low_complexity Low_complexity 1 28 0 4 1234 975 82 0 0 chr15 85187821 85187955 -18307019 + (TTCC)n Simple_repeat Simple_repeat 2 135 0 4 1234 297 0 0 0 chr15 85187955 85187988 -18306986 + (TC)n Simple_repeat Simple_repeat 2 34 0 4 1234 784 197 0 7 chr15 85188186 85188324 -18306650 - B1_Mur4 SINE Alu -13 137 1 4 1234 1436 48 26 31 chr15 85188861 85189056 -18305918 - B2_Mm2 SINE B2 0 195 2 4 1234 320 314 104 26 chr15 85189502 85189695 -18305279 + MIRb SINE MIR 40 247 -21 4 1234 198 209 0 0 chr15 85189805 85189848 -18305126 + CT-rich Low_complexity Low_complexity 2 44 0 4 1234 932 135 0 0 chr15 85190618 85190751 -18304223 - B1_Mus2 SINE Alu -14 133 1 4 1234 396 248 17 50 chr15 85191262 85191381 -18303593 - B3A SINE B2 -82 116 2 4 1234 220 255 0 18 chr15 85191635 85191691 -18303283 - MIR SINE MIR -67 141 87 4 1234 405 95 0 0 chr15 85192358 85192421 -18302553 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1234 352 261 150 22 chr15 85192594 85192774 -18302200 - MER58B DNA MER1_type -13 328 126 4 1234 338 192 186 31 chr15 85193137 85193266 -18301708 - MLT1D LTR MaLR 0 505 357 4 1234 2546 45 6 0 chr15 85193266 85193597 -18301377 - RLTR10B2 LTR ERVK -32 333 1 4 1234 374 339 64 34 chr15 85194129 85194364 -18300610 - MER21B LTR ERV1 -415 448 207 4 1234 243 0 0 0 chr15 85194554 85194581 -18300393 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1234 394 198 108 10 chr15 85194790 85194892 -18300082 - MLT1D-int LTR MaLR -152 1219 1108 4 1234 405 336 78 19 chr15 85194926 85195196 -18299778 - MLT1D-int LTR MaLR -1194 295 10 4 1234 459 306 209 21 chr15 85195197 85195592 -18299382 - MLT1D LTR MaLR 0 467 8 4 1234 631 297 133 12 chr15 85195990 85196314 -18298660 - MLT1A0 LTR MaLR -2 363 1 4 1234 386 291 93 51 chr15 85196382 85196596 -18298378 + MLT1B LTR MaLR 152 374 -16 4 154 658 261 73 77 chr15 85196648 85196988 -18297986 + ORR1E LTR MaLR 1 339 -20 4 1235 207 0 0 0 chr15 85197921 85197944 -18297030 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 1235 700 102 25 8 chr15 85198150 85198269 -18296705 + (TTCCC)n Simple_repeat Simple_repeat 5 125 0 4 1235 312 102 0 0 chr15 85198293 85198342 -18296632 + (TCTG)n Simple_repeat Simple_repeat 4 52 0 4 1235 474 257 143 28 chr15 85198585 85198801 -18296173 - L1MB5 LINE L1 -20 6154 5914 4 1235 294 294 95 18 chr15 85198891 85199059 -18295915 - L1MB5 LINE L1 -400 5774 5595 4 1235 232 164 36 18 chr15 85199078 85199134 -18295840 + (TCTG)n Simple_repeat Simple_repeat 4 60 0 4 1235 411 21 0 0 chr15 85199142 85199190 -18295784 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1235 618 272 0 39 chr15 85199210 85199363 -18295611 - B3A SINE B2 -48 150 4 4 1235 585 247 131 73 chr15 85199370 85199684 -18295290 - L1MB5 LINE L1 -588 5596 5265 4 1235 455 183 12 0 chr15 85199692 85199774 -18295200 - L1MB5 LINE L1 -1549 4597 4515 4 1235 22 0 0 0 chr15 85201024 85201046 -18293928 + AT_rich Low_complexity Low_complexity 1 22 0 4 1235 901 83 15 0 chr15 85201376 85201508 -18293466 - B1_Mur4 SINE Alu -2 148 15 4 1235 369 143 45 125 chr15 85201409 85201521 -18293453 - MT2B LTR ERVL -337 264 162 4 1235 323 278 135 0 chr15 85201590 85201716 -18293258 - B1F1 SINE Alu -6 143 1 4 1235 22 0 0 0 chr15 85202211 85202233 -18292741 + AT_rich Low_complexity Low_complexity 1 22 0 4 1235 972 121 0 57 chr15 85202486 85202644 -18292330 + B1_Mur2 SINE Alu 1 149 0 4 1235 1025 83 13 40 chr15 85202762 85202913 -18292061 - B1_Mus1 SINE Alu 0 148 2 4 1235 29 0 0 0 chr15 85202960 85202989 -18291985 + AT_rich Low_complexity Low_complexity 1 29 0 4 1235 230 281 76 34 chr15 85203282 85203400 -18291574 - L1M5 LINE L1 -1406 4740 4618 4 1235 180 0 0 0 chr15 85203432 85203452 -18291522 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 1235 650 194 199 6 chr15 85203633 85203814 -18291160 - B3 SINE B2 0 216 1 4 1235 1284 90 17 17 chr15 85203834 85204014 -18290960 - B2_Mm2 SINE B2 -14 181 2 4 1235 21 57 0 0 chr15 85204228 85204263 -18290711 + AT_rich Low_complexity Low_complexity 1 35 0 4 1235 1210 77 95 0 chr15 85204269 85204437 -18290537 + B2_Mm1t SINE B2 2 185 -8 4 1235 379 265 50 0 chr15 85204843 85204979 -18289995 - L1MC LINE L1 -2385 5610 5468 4 1235 207 0 0 0 chr15 85205002 85205025 -18289949 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1235 834 37 0 0 chr15 85205027 85205134 -18289840 - B1_Mm SINE Alu -6 141 35 4 1235 230 220 0 20 chr15 85205151 85205202 -18289772 - PB1D10 SINE Alu -53 64 15 4 1235 826 80 184 0 chr15 85205367 85205492 -18289482 - B1_Mus1 SINE Alu 0 148 1 4 1235 346 290 0 29 chr15 85205554 85205657 -18289317 + CT-rich Low_complexity Low_complexity 1 100 0 4 1235 231 182 0 0 chr15 85205899 85205943 -18289031 + L1ME3 LINE L1 5910 5953 -287 4 1235 389 245 0 36 chr15 85205943 85206053 -18288921 - RSINE1 SINE B4 -57 108 3 4 1235 642 217 0 53 chr15 85206059 85206210 -18288764 - B1_Mur1 SINE Alu -3 146 4 4 1235 378 0 0 0 chr15 85206560 85206602 -18288372 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1235 504 229 66 33 chr15 85206658 85206780 -18288194 - B3A SINE B2 -72 126 1 4 1235 296 191 137 11 chr15 85207208 85207303 -18287671 - PB1D10 SINE Alu -10 107 1 4 1235 292 284 93 66 chr15 85207653 85207804 -18287170 - L1MDa LINE L1 -4844 1789 1635 4 1235 888 207 167 38 chr15 85207804 85208175 -18286799 + MTD LTR MaLR 1 419 0 4 1235 229 274 109 31 chr15 85208473 85208601 -18286373 - LTR75 LTR ERVL -421 141 4 4 1235 506 287 56 22 chr15 85208621 85208799 -18286175 - B4 SINE B4 -27 265 82 4 1235 289 296 35 56 chr15 85209199 85209342 -18285632 - RSINE1 SINE B4 -23 142 3 4 1235 731 240 204 7 chr15 85209464 85209749 -18285225 - L1M4 LINE L1 -3124 3022 2682 4 1235 207 0 0 0 chr15 85209956 85209979 -18284995 + (CATTT)n Simple_repeat Simple_repeat 3 25 0 4 1235 1420 43 22 5 chr15 85210062 85210247 -18284727 - B2_Mm2 SINE B2 -6 189 2 4 1235 22 0 0 0 chr15 85210312 85210334 -18284640 + AT_rich Low_complexity Low_complexity 1 22 0 4 1235 661 278 119 25 chr15 85211411 85211576 -18283398 - L1PB4 LINE L1 -189 5967 5730 4 1235 606 14 0 0 chr15 85211576 85211647 -18283327 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 1235 661 265 110 15 chr15 85211647 85211808 -18283166 - L1PB4 LINE L1 -118 5729 5547 4 1235 789 198 25 106 chr15 85212964 85213162 -18281812 + B3 SINE B2 1 182 -13 4 1235 1120 69 0 46 chr15 85213621 85213773 -18281201 + B1_Mus1 SINE Alu 2 146 -2 4 1235 356 237 40 56 chr15 85215199 85215324 -18279650 - ORR1E LTR MaLR -186 173 51 4 1235 538 294 57 124 chr15 85215375 85215658 -18279316 - B4A SINE B4 0 292 29 4 1235 537 247 165 0 chr15 85217683 85217853 -18277121 - B3A SINE B2 0 198 1 4 1235 401 316 71 6 chr15 85218202 85218371 -18276603 + B3 SINE B2 37 216 0 4 1235 239 190 103 0 chr15 85218912 85218970 -18276004 + L1ME1 LINE L1 6113 6176 -3 4 1235 180 152 0 0 chr15 85219514 85219547 -18275427 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1235 575 294 84 4 chr15 85219575 85219838 -18275136 - B4A SINE B4 -8 284 1 4 1235 354 305 38 19 chr15 85220973 85221130 -18273844 - RSINE1 SINE B4 -5 160 1 4 1235 917 143 13 26 chr15 85221321 85221472 -18273502 + B1_Mur4 SINE Alu 2 150 0 4 1235 265 246 29 14 chr15 85221486 85221556 -18273418 + B2_Mm2 SINE B2 2 72 -123 4 1235 240 122 0 0 chr15 85221606 85221647 -18273327 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1235 180 0 0 0 chr15 85221648 85221668 -18273306 + (TA)n Simple_repeat Simple_repeat 1 20 0 4 1235 480 200 0 22 chr15 85221746 85221783 -18273191 + B4 SINE B4 51 85 -207 4 1235 239 278 22 26 chr15 85221783 85221877 -18273097 + PB1D7 SINE Alu 2 97 -23 4 1235 920 176 7 0 chr15 85222873 85223021 -18271953 - B1_Mur3 SINE Alu 0 149 1 4 1235 279 0 0 0 chr15 85224167 85224198 -18270776 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1235 244 295 38 13 chr15 85224257 85224336 -18270638 - RSINE1 SINE B4 -69 96 16 4 1235 294 162 38 63 chr15 85224518 85224597 -18270377 + PB1D9 SINE Alu 43 119 -1 4 1235 776 164 0 13 chr15 85224727 85224881 -18270093 + G-rich Low_complexity Low_complexity 5 156 0 4 1235 198 71 0 0 chr15 85225095 85225123 -18269851 + (CAAA)n Simple_repeat Simple_repeat 4 31 0 4 1235 340 283 136 21 chr15 85225127 85225521 -18269453 + L1MEb LINE L1 585 1021 -5179 4 1235 212 0 36 0 chr15 85225760 85225788 -18269186 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1235 805 70 35 0 chr15 85228602 85228716 -18266258 + PB1D9 SINE Alu 2 119 -1 5 1235 693 216 73 109 chr15 85229207 85229399 -18265575 + B3A SINE B2 2 186 -9 5 1235 483 247 0 0 chr15 85229617 85229714 -18265260 - RSINE1 SINE B4 -68 97 1 5 1235 843 10 0 0 chr15 85230172 85230268 -18264706 + (TTTCC)n Simple_repeat Simple_repeat 5 100 0 5 1235 309 109 0 0 chr15 85230268 85230314 -18264660 + (TCC)n Simple_repeat Simple_repeat 2 47 0 5 1235 319 157 0 0 chr15 85230366 85230417 -18264557 - B1_Mur4 SINE Alu -97 53 3 5 1235 611 242 87 0 chr15 85231382 85231531 -18263443 - RSINE1 SINE B4 -1 164 3 5 1235 267 324 72 0 chr15 85231911 85232022 -18262952 - RSINE1 SINE B4 -46 119 1 5 1235 284 310 0 0 chr15 85232340 85232411 -18262563 + ID4_ SINE ID 13 83 0 5 1235 494 263 18 0 chr15 85232614 85232728 -18262246 + B4A SINE B4 165 280 -12 5 1235 441 0 0 0 chr15 85232793 85232842 -18262132 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1235 1169 87 11 6 chr15 85234575 85234749 -18260225 + B2_Mm1t SINE B2 1 175 -18 5 1235 21 0 0 0 chr15 85234760 85234781 -18260193 + AT_rich Low_complexity Low_complexity 1 21 0 5 1235 351 125 14 18 chr15 85234852 85234918 -18260056 + B2_Mm2 SINE B2 46 116 -82 5 1235 22 0 0 0 chr15 85234931 85234953 -18260021 + AT_rich Low_complexity Low_complexity 1 22 0 5 1235 720 64 0 0 chr15 85234955 85235049 -18259925 + (GGAA)n Simple_repeat Simple_repeat 3 96 0 5 1235 295 313 101 28 chr15 85236746 85236961 -18258013 - MIR SINE MIR -21 241 11 5 1235 504 310 25 13 chr15 85238390 85238547 -18256427 + RSINE1 SINE B4 6 164 -1 5 1235 1238 254 99 10 chr15 85238592 85238977 -18255997 + MTD LTR MaLR 1 419 0 5 1235 217 226 0 23 chr15 85240704 85240790 -18254184 + C-rich Low_complexity Low_complexity 5 88 0 5 1235 10277 77 3 3 chr15 85240886 85243017 -18251957 - L1_Mus1 LINE L1 -1 6566 4439 5 1235 275 294 35 44 chr15 85243606 85243720 -18251254 - Lx8 LINE L1 -638 6835 6723 5 1235 783 204 7 0 chr15 85247684 85247831 -18247143 + B1_Mus1 SINE Alu 1 148 0 5 1235 186 313 103 15 chr15 85248008 85248076 -18246898 - MIRm SINE MIR -124 152 79 5 1235 429 304 96 49 chr15 85248657 85249103 -18245871 - L1MD LINE L1 -1543 4603 4137 5 1235 717 225 125 5 chr15 85249198 85249390 -18245584 + B3 SINE B2 2 216 0 5 1235 1022 72 22 0 chr15 85249554 85249692 -18245282 + B1_Mus1 SINE Alu 2 142 -6 5 1235 468 280 134 25 chr15 85249955 85250193 -18244781 + Lx8 LINE L1 7171 7434 -39 5 1235 312 27 0 0 chr15 85250531 85250568 -18244406 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1235 24 0 0 0 chr15 85251868 85251892 -18243082 + AT_rich Low_complexity Low_complexity 1 24 0 5 1235 837 182 21 4 chr15 85252116 85252292 -18242682 - B2_Mm2 SINE B2 -29 187 1 5 1235 809 178 27 0 chr15 85252841 85252987 -18241987 + B1_Mur4 SINE Alu 1 150 0 5 1235 210 143 0 0 chr15 85252989 85253024 -18241950 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 5 1235 291 279 51 0 chr15 85253310 85253389 -18241585 - RSINE1 SINE B4 -5 160 78 5 1235 231 257 65 19 chr15 85253440 85253547 -18241427 - B4A SINE B4 -148 144 33 5 1235 594 274 71 13 chr15 85253583 85253763 -18241211 - B3A SINE B2 -4 191 16 5 1235 396 302 37 54 chr15 85254241 85254591 -18240383 + L1MDb LINE L1 982 1325 -5084 5 1235 246 32 0 0 chr15 85255317 85255348 -18239626 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 5 1235 357 247 38 17 chr15 85255377 85255494 -18239480 + L1MC LINE L1 5690 5808 -432 5 1235 337 199 147 0 chr15 85256038 85256174 -18238800 - RMER17C LTR ERVK -137 273 118 5 1235 630 39 0 0 chr15 85256301 85256378 -18238596 + (TCCC)n Simple_repeat Simple_repeat 4 80 0 5 1235 24 32 0 0 chr15 85256456 85256487 -18238487 + AT_rich Low_complexity Low_complexity 1 31 0 5 1235 624 124 37 28 chr15 85256635 85256646 -18238328 - B3 SINE B2 -105 111 97 5 1235 609 14 0 0 chr15 85256646 85256716 -18238258 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 5 1235 724 55 1 1 chr15 85256716 85256812 -18238162 - B2_Mm2 SINE B2 -120 96 3 5 1235 260 327 61 61 chr15 85257003 85257117 -18237857 - PB1D10 SINE Alu 0 117 4 5 1235 195 296 113 10 chr15 85257200 85257312 -18237662 + MIRc SINE MIR 68 193 -75 5 1235 1243 150 9 14 chr15 85259123 85259340 -18235634 - URR1A DNA MER1_type -9 217 2 5 1235 395 318 26 0 chr15 85259416 85259570 -18235404 + (CTGTG)n Simple_repeat Simple_repeat 2 159 0 5 1235 2288 232 86 28 chr15 85259969 85260541 -18234433 - Lx7 LINE L1 -892 6804 6200 5 1235 337 273 41 8 chr15 85260829 85260951 -18234023 - Lx7 LINE L1 -1500 6196 6071 5 1235 231 314 14 0 chr15 85261219 85261231 -18233743 + B4A SINE B4 74 86 -206 5 1235 219 304 54 0 chr15 85261231 85261323 -18233651 + B1F SINE Alu 1 97 -52 5 1235 378 0 0 0 chr15 85261424 85261466 -18233508 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1235 211 267 23 91 chr15 85261582 85261700 -18233274 - MER5A DNA MER1_type -59 130 20 5 1235 4195 38 0 0 chr15 85261700 85262175 -18232799 - MT2C_Mm LTR ERVL 0 475 1 5 1235 211 267 23 91 chr15 85262175 85262188 -18232786 - MER5A DNA MER1_type -170 19 8 5 1235 1574 247 85 35 chr15 85263326 85263868 -18231106 - Lx8 LINE L1 -774 6699 6131 5 1235 228 211 200 26 chr15 85263999 85264189 -18230785 + Lx9 LINE L1 7414 7636 -8 5 1235 441 0 0 0 chr15 85264287 85264336 -18230638 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 5 1235 1251 44 0 0 chr15 85264336 85264495 -18230479 - B2_Mm1a SINE B2 -33 160 2 5 1235 293 298 34 47 chr15 85265071 85265189 -18229785 + L1MEc LINE L1 2038 2157 -4243 5 1235 336 111 0 0 chr15 85265428 85265482 -18229492 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 1235 766 282 120 56 chr15 85265718 85266075 -18228899 + MLT1C LTR MaLR 67 446 -21 5 1235 302 221 0 29 chr15 85266100 85266170 -18228804 - ID2 SINE ID -14 69 2 5 1235 214 274 45 15 chr15 85267305 85267397 -18227577 - MIRc SINE MIR -88 188 92 5 1235 221 170 0 21 chr15 85267593 85267623 -18227351 + T-rich Low_complexity Low_complexity 22 51 0 5 1235 1092 58 58 0 chr15 85267623 85267762 -18227212 - B1_Mus1 SINE Alu -1 147 1 5 1235 221 170 0 21 chr15 85267762 85267779 -18227195 + T-rich Low_complexity Low_complexity 5 21 0 5 1235 492 236 99 235 chr15 85268068 85268400 -18226574 - B4 SINE B4 -5 287 1 5 1235 845 307 121 11 chr15 85270024 85270147 -18224827 - L1MA4A LINE L1 -372 5931 5803 5 1235 234 0 0 0 chr15 85270147 85270173 -18224801 + (TC)n Simple_repeat Simple_repeat 1 26 0 5 1235 324 0 0 0 chr15 85270173 85270208 -18224766 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1235 845 296 107 35 chr15 85270208 85270536 -18224438 - L1MA4A LINE L1 -501 5802 5370 5 1235 357 24 0 0 chr15 85270536 85270578 -18224396 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1235 843 296 107 35 chr15 85270578 85270870 -18224104 - L1MA4A LINE L1 -478 5369 5044 5 1235 245 299 130 17 chr15 85271149 85271326 -18223648 - L1MEe LINE L1 -4391 463 267 5 1235 542 264 25 43 chr15 85271326 85271488 -18223486 + RSINE1 SINE B4 3 161 -4 5 1235 459 0 0 0 chr15 85271503 85271554 -18223420 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 5 1235 405 0 0 0 chr15 85271833 85271878 -18223096 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1235 615 251 156 0 chr15 85271885 85272084 -18222890 - B4A SINE B4 -62 230 1 5 1235 721 221 88 44 chr15 85272321 85272525 -18222449 - B3A SINE B2 0 216 4 5 1235 751 246 10 67 chr15 85272716 85272925 -18222049 - B3A SINE B2 0 198 2 5 1235 249 119 0 0 chr15 85273433 85273475 -18221499 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 5 1235 1076 96 14 0 chr15 85273490 85273636 -18221338 - B1_Mur4 SINE Alu -2 148 1 5 1235 819 101 0 0 chr15 85273904 85274023 -18220951 + (TCCCC)n Simple_repeat Simple_repeat 4 122 0 5 1235 24 32 0 0 chr15 85274814 85274845 -18220129 + AT_rich Low_complexity Low_complexity 1 31 0 5 1235 231 204 18 18 chr15 85276105 85276160 -18218814 + L1ME3B LINE L1 6065 6119 -121 5 1235 198 357 62 16 chr15 85276327 85276455 -18218519 - MIRb SINE MIR -99 169 36 5 1235 1132 231 112 6 chr15 85277161 85277500 -18217474 - MTE2a LTR MaLR -4 375 1 5 1235 521 254 99 0 chr15 85278121 85278263 -18216711 + RSINE1 SINE B4 4 159 -6 5 1235 532 243 34 14 chr15 85278279 85278425 -18216549 - B1_Mur2 SINE Alu 0 149 1 5 1235 717 284 203 0 chr15 85279591 85279813 -18215161 + B4A SINE B4 26 292 0 5 1235 257 280 107 7 chr15 85279833 85279978 -18214996 + L1M4c LINE L1 2450 2530 -4477 5 1235 438 268 55 8 chr15 85280208 85280336 -18214638 - MTD LTR MaLR -14 405 272 5 1235 323 118 0 0 chr15 85280402 85280453 -18214521 - ORR1A3-int LTR MaLR -1346 617 567 5 1235 353 97 65 0 chr15 85280453 85280515 -18214459 - MERVL_2A-int LTR ERVL -132 5629 5564 5 1235 932 196 48 51 chr15 85280581 85280800 -18214174 - MTD LTR MaLR -218 201 1 5 1235 459 287 72 23 chr15 85280819 85281083 -18213891 + L1M4c LINE L1 2532 2808 -4200 5 1235 1235 130 6 0 chr15 85281106 85281283 -18213691 + B2_Mm1t SINE B2 2 179 -14 5 1235 349 154 13 0 chr15 85281333 85281397 -18213577 + B2_Mm2 SINE B2 46 115 -83 5 1235 25 31 0 0 chr15 85281400 85281432 -18213542 + AT_rich Low_complexity Low_complexity 1 32 0 5 1235 423 267 161 3 chr15 85281435 85281794 -18213180 + L1M4c LINE L1 2843 3256 -3750 5 1235 636 274 0 13 chr15 85281838 85281993 -18212981 + RSINE1 SINE B4 12 164 -1 5 1235 447 327 84 63 chr15 85281997 85282036 -18212938 + L1M4c LINE L1 3261 3299 -3707 5 1235 1302 74 57 0 chr15 85282036 85282212 -18212762 + B2_Mm2 SINE B2 1 186 -9 5 1235 447 327 84 63 chr15 85282212 85282551 -18212423 + L1M4c LINE L1 3300 3647 -3359 5 1235 1814 294 127 27 chr15 85282560 85283711 -18211263 + L1M4c LINE L1 4047 5312 -1688 5 1235 258 355 14 0 chr15 85283923 85284064 -18210910 + L1M4c LINE L1 5635 5777 -1229 5 1235 279 205 12 93 chr15 85284096 85284182 -18210792 + PB1 SINE Alu 42 120 -7 5 1235 757 276 71 8 chr15 85284268 85284520 -18210454 + L1MB2 LINE L1 5797 6064 -107 5 1235 285 197 32 32 chr15 85284554 85284617 -18210357 + B4A SINE B4 159 221 -71 5 1235 22 0 0 0 chr15 85284617 85284639 -18210335 + AT_rich Low_complexity Low_complexity 1 22 0 6 1235 436 212 159 0 chr15 85289551 85289683 -18205291 + L1MA6 LINE L1 6029 6181 -119 6 1235 423 176 68 34 chr15 85289695 85289783 -18205191 + RSINE1 SINE B4 14 104 -61 6 1235 351 44 0 0 chr15 85289867 85289912 -18205062 + (CAG)n Simple_repeat Simple_repeat 3 47 0 6 1235 386 296 14 82 chr15 85290072 85290219 -18204755 + RSINE1 SINE B4 3 139 -26 6 1235 223 115 105 88 chr15 85291074 85291131 -18203843 - L2b LINE L2 0 3375 3318 6 1235 235 235 0 90 chr15 85291654 85291743 -18203231 - ID4 SINE ID -1 82 2 6 1235 303 96 0 0 chr15 85292369 85292421 -18202553 + (TC)n Simple_repeat Simple_repeat 1 52 0 6 1235 405 0 0 0 chr15 85292421 85292466 -18202508 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1235 230 349 27 112 chr15 85292857 85293044 -18201930 + LTR16D1 LTR ERVL 115 285 -390 6 1235 776 153 107 0 chr15 85296116 85296247 -18198727 - B1_Mur1 SINE Alu 0 149 5 6 1235 259 320 13 0 chr15 85296748 85296826 -18198148 + MIRc SINE MIR 56 134 -134 6 1235 230 266 100 52 chr15 85296879 85297089 -18197885 + ORR1A1-int LTR MaLR 1147 1366 -426 6 1235 188 371 121 42 chr15 85297334 85297641 -18197333 - L2 LINE L2 -779 2640 2310 6 1235 845 262 68 64 chr15 85298402 85298683 -18196291 + MLT1B LTR MaLR 1 282 -108 6 1235 477 138 0 0 chr15 85298704 85298784 -18196190 + (CA)n Simple_repeat Simple_repeat 2 81 0 6 1235 315 356 78 26 chr15 85298960 85299113 -18195861 + L1MEg LINE L1 1211 1371 -4871 6 1235 359 320 103 19 chr15 85299157 85299313 -18195661 + MLT1F2 LTR MaLR 12 180 -380 6 1235 267 347 8 0 chr15 85300053 85300174 -18194800 + L1MEg LINE L1 2749 2870 -3276 6 1235 397 269 57 19 chr15 85300589 85300695 -18194279 + PB1D7 SINE Alu 11 120 0 6 1235 405 295 29 0 chr15 85300718 85300823 -18194151 + RSINE1 SINE B4 4 111 -54 6 1235 272 257 140 44 chr15 85301176 85301290 -18193684 + RSINE1 SINE B4 41 165 0 6 1235 1253 54 0 0 chr15 85301629 85301776 -18193198 + B1_Mus2 SINE Alu 1 147 0 6 1235 303 231 43 21 chr15 85301990 85302094 -18192880 + ID4 SINE ID 9 113 -39 6 1235 289 347 16 39 chr15 85302306 85302330 -18192644 - B1_Mm SINE Alu -21 126 103 6 1235 675 0 0 0 chr15 85302330 85302405 -18192569 + (TC)n Simple_repeat Simple_repeat 1 75 0 6 1235 468 270 20 1 chr15 85302405 85302509 -18192465 - PB1D7 SINE Alu -17 103 1 6 1235 234 344 0 91 chr15 85302423 85302522 -18192452 - MT2B2 LTR ERVL -343 241 152 6 1235 724 181 58 0 chr15 85302525 85302663 -18192311 - B1_Mus2 SINE Alu -1 146 1 6 1235 269 244 51 0 chr15 85303120 85303198 -18191776 + ERVL-int LTR ERVL 2987 3068 -2646 6 1235 502 229 44 32 chr15 85303230 85303388 -18191586 + ERVL-int LTR ERVL 4144 4303 -1454 6 1235 352 224 71 0 chr15 85303377 85303475 -18191499 + ERVL-int LTR ERVL 4233 4337 -1330 6 1235 234 0 0 0 chr15 85303574 85303600 -18191374 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 1235 334 261 33 25 chr15 85303759 85303881 -18191093 + ERVL-int LTR ERVL 5631 5753 -4 6 1235 843 209 0 0 chr15 85304032 85304166 -18190808 + B1_Mur1 SINE Alu 1 134 -15 6 1235 401 274 87 26 chr15 85304188 85304383 -18190591 + MER2 DNA MER2_type 95 301 -44 6 1235 525 242 0 30 chr15 85304481 85304613 -18190361 + ERVL-int LTR ERVL 831 958 -4799 6 1235 962 255 136 17 chr15 85304614 85304901 -18190073 - MTE2b LTR MaLR -58 321 1 6 1235 724 232 40 6 chr15 85304902 85305075 -18189899 + MLT1B LTR MaLR 201 379 -11 6 1235 180 361 0 0 chr15 85305113 85305174 -18189800 - L2c LINE L2 -63 3324 3264 6 1235 1540 48 16 0 chr15 85306410 85306598 -18188376 + B2_Mm2 SINE B2 3 193 -2 6 1235 360 0 0 0 chr15 85306754 85306794 -18188180 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1235 488 321 139 6 chr15 85307047 85307379 -18187595 - Charlie2a DNA MER1_type -3 2858 2483 6 1235 636 300 184 26 chr15 85307482 85308020 -18186954 + L1M5 LINE L1 2901 3523 -2623 6 1235 322 305 61 41 chr15 85308187 85308334 -18186640 + MER20B DNA MER1_type 4 153 -630 6 1235 184 279 0 0 chr15 85309782 85309825 -18185149 + MIRm SINE MIR 109 151 -125 6 1235 195 219 60 45 chr15 85309794 85309861 -18185113 + MIRc SINE MIR 118 185 -83 6 1235 459 0 0 0 chr15 85311544 85311595 -18183379 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 1235 207 214 0 51 chr15 85312659 85312718 -18182256 + C-rich Low_complexity Low_complexity 2 57 0 6 1235 240 269 124 57 chr15 85312966 85313143 -18181831 + L2a LINE L2 2963 3151 -275 6 1235 395 275 77 18 chr15 85314450 85314620 -18180354 + L1MEc LINE L1 15 194 -6206 6 1235 313 352 43 74 chr15 85314789 85315114 -18179860 + L1MEc LINE L1 536 850 -5550 6 1235 792 300 14 5 chr15 85315380 85315601 -18179373 + B4 SINE B4 1 223 -69 6 1235 267 203 0 0 chr15 85315601 85315660 -18179314 + A-rich Low_complexity Low_complexity 1 59 0 6 1235 211 214 0 0 chr15 85315660 85315702 -18179272 + (CAGA)n Simple_repeat Simple_repeat 3 44 0 6 1235 827 158 56 21 chr15 85315747 85315889 -18179085 + B1_Mur1 SINE Alu 2 148 -1 6 1235 620 239 116 92 chr15 85315889 85315946 -18179028 + B4 SINE B4 104 292 0 6 1235 267 203 0 0 chr15 85315970 85316029 -18178945 + (TA)n Simple_repeat Simple_repeat 2 60 0 6 1235 419 231 79 37 chr15 85316032 85316221 -18178753 + L1MEc LINE L1 1352 1548 -4852 6 1235 637 147 37 0 chr15 85316238 85316347 -18178627 + B1_Mur1 SINE Alu 24 136 -13 6 1235 383 226 67 82 chr15 85316240 85316375 -18178599 + B4 SINE B4 111 243 -49 6 1235 452 292 92 5 chr15 85316454 85316671 -18178303 + L1MEc LINE L1 2658 2893 -3426 6 1235 391 289 205 27 chr15 85316684 85316869 -18178105 + L1ME1 LINE L1 2779 2996 -3150 6 1235 503 232 17 26 chr15 85316925 85317040 -18177934 + B1F SINE Alu 36 149 0 6 1235 310 271 226 21 chr15 85317159 85317588 -18177386 + L1ME1 LINE L1 3125 3641 -2505 6 1235 997 292 73 34 chr15 85317911 85318500 -18176474 + L1ME1 LINE L1 3683 4294 -1852 6 1235 303 335 68 45 chr15 85318497 85318745 -18176229 + L1ME1 LINE L1 4760 5012 -1134 6 1235 447 19 0 0 chr15 85318818 85318870 -18176104 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1235 553 182 219 16 chr15 85318872 85318995 -18175979 - B3A SINE B2 -50 148 1 6 1235 803 279 82 23 chr15 85318998 85319600 -18175374 + L1ME1 LINE L1 5088 5747 -432 6 1235 815 250 92 20 chr15 85319831 85320080 -18174894 + B4A SINE B4 3 269 -23 6 1235 384 265 66 75 chr15 85320255 85320483 -18174491 + L1ME1 LINE L1 5953 6178 -1 6 1235 651 104 0 0 chr15 85321137 85321252 -18173722 + (GA)n Simple_repeat Simple_repeat 2 116 0 6 1235 222 37 0 0 chr15 85321453 85321480 -18173494 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 1235 411 21 0 0 chr15 85323058 85323106 -18171868 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1235 720 256 95 174 chr15 85323112 85323454 -18171520 - MTD LTR MaLR 0 419 101 6 1235 486 0 0 0 chr15 85323454 85323508 -18171466 + (GGAA)n Simple_repeat Simple_repeat 2 55 0 6 1235 720 256 95 174 chr15 85323508 85323619 -18171355 - MTD LTR MaLR -319 100 2 6 1235 280 303 73 104 chr15 85323629 85323794 -18171180 - L1MB1 LINE L1 -267 5922 5754 6 1235 432 279 49 21 chr15 85323794 85323937 -18171037 - B1F1 SINE Alu -2 147 1 6 1235 269 302 73 106 chr15 85323937 85323991 -18170983 - L1MB1 LINE L1 -539 5761 5710 6 1235 3152 48 18 15 chr15 85325446 85325845 -18169129 + MTB LTR MaLR 1 400 0 6 1235 749 124 17 29 chr15 85326386 85326560 -18168414 + GA-rich Low_complexity Low_complexity 2 173 0 6 1235 729 193 0 0 chr15 85326799 85326949 -18168025 + GA-rich Low_complexity Low_complexity 1 150 0 6 1235 1406 40 0 6 chr15 85326950 85327128 -18167846 + (GGA)n Simple_repeat Simple_repeat 2 178 0 6 1235 2555 147 29 10 chr15 85327311 85327723 -18167251 - MTC LTR MaLR -1 420 1 6 1236 884 102 0 14 chr15 85328984 85329123 -18165851 + (GAAAA)n Simple_repeat Simple_repeat 2 138 0 6 1236 220 278 0 18 chr15 85329189 85329244 -18165730 + CT-rich Low_complexity Low_complexity 4 57 0 6 1236 679 179 8 0 chr15 85329508 85329625 -18165349 - B1_Mur1 SINE Alu -30 119 2 6 1236 431 270 20 10 chr15 85331169 85331259 -18163715 + B4A SINE B4 185 276 -16 6 1236 537 121 0 0 chr15 85331259 85331342 -18163632 + (TG)n Simple_repeat Simple_repeat 2 84 0 6 1236 250 152 33 139 chr15 85331484 85331606 -18163368 + G-rich Low_complexity Low_complexity 5 113 0 6 1236 341 243 262 7 chr15 85331815 85331964 -18163010 + L1M4 LINE L1 4978 5164 -982 6 1236 779 181 14 21 chr15 85331966 85332107 -18162867 + B1_Mur1 SINE Alu 1 140 -9 6 1236 499 289 147 7 chr15 85332116 85332259 -18162715 + RSINE1 SINE B4 3 165 0 6 1236 1375 99 21 0 chr15 85332327 85332518 -18162456 + B2_Mm2 SINE B2 1 195 0 6 1236 357 75 0 0 chr15 85332567 85332620 -18162354 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1236 189 0 0 0 chr15 85332620 85332640 -18162334 + (GA)n Simple_repeat Simple_repeat 2 22 0 6 1236 186 370 125 7 chr15 85334331 85334467 -18160507 + L2c LINE L2 3028 3179 -208 6 1236 426 250 0 57 chr15 85334636 85334740 -18160234 + B4 SINE B4 1 98 -194 6 1236 577 283 75 135 chr15 85334740 85334940 -18160034 + B3A SINE B2 2 189 -6 6 1236 28 29 0 0 chr15 85335012 85335047 -18159927 + AT_rich Low_complexity Low_complexity 1 35 0 6 1236 432 241 128 52 chr15 85335047 85335218 -18159756 + B3 SINE B2 28 205 -11 6 1236 624 182 0 0 chr15 85335217 85335327 -18159647 + B1_Mur1 SINE Alu 33 142 -7 6 1236 721 284 34 34 chr15 85335339 85335543 -18159431 + B4 SINE B4 86 289 -3 6 1236 324 0 0 0 chr15 85336975 85337011 -18157963 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1236 351 0 0 0 chr15 85337692 85337731 -18157243 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1236 1003 324 28 34 chr15 85339103 85339429 -18155545 + RCHARR1 DNA MER1_type 2 325 -649 6 1236 1293 34 0 0 chr15 85339432 85339578 -18155396 + B1_Mm SINE Alu 2 147 0 6 1236 320 42 62 0 chr15 85339578 85339626 -18155348 + (CAAAA)n Simple_repeat Simple_repeat 1 51 0 6 1236 1044 113 0 0 chr15 85339645 85339796 -18155178 + B2_Mm2 SINE B2 2 152 -43 6 1236 1115 133 67 0 chr15 85339822 85340002 -18154972 + B2_Mm2 SINE B2 2 193 -2 6 1236 752 199 6 90 chr15 85340123 85340259 -18154715 - B3 SINE B2 -53 163 41 6 1236 279 0 0 0 chr15 85340259 85340290 -18154684 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1236 752 199 6 90 chr15 85340290 85340330 -18154644 - B3 SINE B2 -176 40 2 6 1236 1164 258 78 51 chr15 85340362 85340455 -18154519 + RCHARR1 DNA MER1_type 390 495 -479 6 1236 363 308 109 65 chr15 85340455 85340639 -18154335 + B3A SINE B2 1 192 -6 6 1236 1164 258 78 51 chr15 85340639 85340995 -18153979 + RCHARR1 DNA MER1_type 496 851 -123 6 1236 219 114 0 0 chr15 85341687 85341722 -18153252 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1236 1091 200 9 28 chr15 85341809 85342025 -18152949 + B3 SINE B2 2 213 -3 7 1236 473 30 0 29 chr15 85342028 85342096 -18152878 + (TAAA)n Simple_repeat Simple_repeat 4 69 0 7 1236 1186 107 73 6 chr15 85342933 85343111 -18151863 - B2_Mm2 SINE B2 -2 193 4 7 1236 545 165 24 18 chr15 85344468 85344635 -18150339 + (TG)n Simple_repeat Simple_repeat 2 169 0 7 1236 267 348 87 22 chr15 85344727 85344865 -18150109 - B4A SINE B4 -6 286 140 7 1236 1007 130 220 0 chr15 85345131 85345308 -18149666 + B3 SINE B2 1 216 0 7 1236 236 255 0 18 chr15 85345308 85345359 -18149615 + polypurine Low_complexity Low_complexity 4 54 0 7 1236 905 160 34 20 chr15 85345360 85345507 -18149467 + B1_Mur4 SINE Alu 1 149 -1 7 1236 461 129 24 0 chr15 85345508 85345547 -18149427 + polypurine Low_complexity Low_complexity 4 42 0 7 1236 1194 73 0 22 chr15 85345547 85345729 -18149245 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 7 1236 461 129 24 0 chr15 85345729 85345774 -18149200 + polypurine Low_complexity Low_complexity 43 89 0 7 1236 608 26 0 13 chr15 85345774 85345853 -18149121 + (GGAA)n Simple_repeat Simple_repeat 2 79 0 7 1236 556 308 153 8 chr15 85345863 85346105 -18148869 + B4A SINE B4 6 282 -10 7 1236 3051 39 0 0 chr15 85346273 85346633 -18148341 + L1Md_A LINE L1 6223 6582 0 7 1236 906 26 197 0 chr15 85346668 85346785 -18148189 + B1_Mm SINE Alu 1 140 -7 7 1236 270 0 0 0 chr15 85346789 85346819 -18148155 + (A)n Simple_repeat Simple_repeat 1 30 0 7 1236 458 248 9 28 chr15 85346819 85346927 -18148047 - PB1D7 SINE Alu -13 107 2 7 1236 310 403 102 0 chr15 85347033 85347219 -18147755 + BLACKJACK DNA AcHobo 2133 2337 -607 7 1236 285 217 0 55 chr15 85347266 85347339 -18147635 - ID4_ SINE ID -13 70 2 7 1236 475 237 13 0 chr15 85347458 85347614 -18147360 + (TG)n Simple_repeat Simple_repeat 1 158 0 7 1236 637 252 119 56 chr15 85347629 85347881 -18147093 - B4A SINE B4 -1 291 24 7 1236 422 341 119 64 chr15 85347914 85348194 -18146780 + BLACKJACK DNA AcHobo 2470 2775 -169 7 1236 595 216 34 8 chr15 85348194 85348311 -18146663 - PB1D7 SINE Alu 0 120 1 7 1236 422 341 119 64 chr15 85348311 85348466 -18146508 + BLACKJACK DNA AcHobo 2776 2929 -15 7 1236 384 228 0 0 chr15 85348597 85348711 -18146263 + C-rich Low_complexity Low_complexity 4 117 0 7 1236 465 19 0 0 chr15 85350645 85350699 -18144275 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1236 611 243 5 159 chr15 85350701 85350902 -18144072 - B3A SINE B2 -28 170 1 7 1236 550 313 34 106 chr15 85350918 85351304 -18143670 - ORR1E LTR MaLR 0 359 2 7 1236 405 0 0 0 chr15 85352084 85352129 -18142845 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1236 225 125 0 111 chr15 85352801 85352855 -18142119 + B4A SINE B4 85 132 -160 7 1236 249 90 0 65 chr15 85352809 85352861 -18142113 + B1_Mus1 SINE Alu 6 51 -66 7 1236 290 26 26 0 chr15 85352886 85352925 -18142049 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 7 1236 262 229 122 20 chr15 85352946 85353044 -18141930 + L1MC2 LINE L1 6212 6319 -25 7 1236 1119 127 12 0 chr15 85353051 85353224 -18141750 + B2_Mm2 SINE B2 1 175 -20 7 1236 243 61 0 0 chr15 85353253 85353286 -18141688 + (A)n Simple_repeat Simple_repeat 1 33 0 7 1236 306 0 0 0 chr15 85356289 85356323 -18138651 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1236 788 204 0 33 chr15 85356404 85356556 -18138418 - B1_Mur1 SINE Alu 0 149 3 7 1236 633 147 0 0 chr15 85356561 85356670 -18138304 + (TA)n Simple_repeat Simple_repeat 1 109 0 7 1236 375 332 158 39 chr15 85356670 85356930 -18138044 - B4A SINE B4 0 292 2 7 1236 571 223 0 0 chr15 85356946 85357058 -18137916 - PB1D7 SINE Alu -8 112 1 7 1236 530 98 12 0 chr15 85358256 85358338 -18136636 + (TTCTC)n Simple_repeat Simple_repeat 3 85 0 7 1236 773 204 11 0 chr15 85358332 85358508 -18136466 + CT-rich Low_complexity Low_complexity 3 180 0 7 1236 543 31 0 0 chr15 85358508 85358573 -18136401 + (TTTC)n Simple_repeat Simple_repeat 1 65 0 7 1236 1160 44 0 0 chr15 85358573 85358710 -18136264 - B1_Mus1 SINE Alu -11 137 1 7 1236 198 103 0 0 chr15 85359379 85359408 -18135566 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1236 205 269 19 0 chr15 85361199 85361251 -18133723 - L3 LINE CR1 -100 4389 4337 7 1236 1255 48 0 0 chr15 85363368 85363515 -18131459 + B1_Mus2 SINE Alu 1 147 0 7 1236 180 0 0 0 chr15 85363515 85363535 -18131439 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1236 180 381 16 0 chr15 85368578 85368641 -18126333 + L2b LINE L2 3306 3369 -6 7 1236 270 0 0 0 chr15 85369103 85369133 -18125841 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 7 1236 531 110 0 0 chr15 85369242 85369248 -18125726 + (GA)n Simple_repeat Simple_repeat 2 7 0 7 1236 876 167 14 0 chr15 85369248 85369392 -18125582 + B1_Mus2 SINE Alu 1 146 -1 7 1236 531 110 0 0 chr15 85369392 85369467 -18125507 + (GA)n Simple_repeat Simple_repeat 2 76 0 7 1236 200 302 16 0 chr15 85369538 85369601 -18125373 - L2b LINE L2 -223 3152 3089 7 1236 239 304 17 113 chr15 85371598 85371713 -18123261 + MLT1D LTR MaLR 280 383 -122 7 1236 212 323 128 29 chr15 85372013 85372115 -18122859 - MIR3 SINE MIR -53 155 44 7 1236 739 221 0 22 chr15 85372139 85372278 -18122696 - B1_Mur1 SINE Alu -13 136 1 7 1236 335 225 0 27 chr15 85372279 85372352 -18122622 - PB1D10 SINE Alu -1 116 46 7 1236 549 0 0 0 chr15 85372601 85372662 -18122312 + (CCCTAA)n Simple_repeat Simple_repeat 3 63 0 7 1236 207 333 43 0 chr15 85373170 85373263 -18121711 + L2c LINE L2 3102 3198 -189 7 1236 189 0 0 0 chr15 85373742 85373763 -18121211 + (TTG)n Simple_repeat Simple_repeat 1 21 0 7 1236 191 315 0 0 chr15 85374444 85374498 -18120476 + MIRc SINE MIR 72 125 -143 7 1236 437 62 15 0 chr15 85374679 85374744 -18120230 + (TCTCCC)n Simple_repeat Simple_repeat 2 67 0 7 1236 221 245 116 27 chr15 85376503 85376586 -18118388 - MIR SINE MIR -71 197 104 7 1236 243 0 0 0 chr15 85376976 85377003 -18117971 + (CCA)n Simple_repeat Simple_repeat 2 28 0 7 1236 224 30 30 0 chr15 85377230 85377263 -18117711 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 1236 450 0 0 0 chr15 85379937 85379987 -18114987 + (TAA)n Simple_repeat Simple_repeat 2 51 0 7 1236 330 289 0 0 chr15 85380020 85380103 -18114871 + ID4 SINE ID 1 83 0 7 1236 1028 97 14 14 chr15 85380174 85380321 -18114653 + B1_Mm SINE Alu 1 147 0 7 1236 287 237 92 0 chr15 85380579 85380655 -18114319 + B3A SINE B2 70 152 -46 7 1236 549 0 0 0 chr15 85380659 85380720 -18114254 + (TC)n Simple_repeat Simple_repeat 1 61 0 7 1236 471 18 0 0 chr15 85380720 85380775 -18114199 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1236 866 199 0 0 chr15 85380779 85380915 -18114059 - B1_Mur2 SINE Alu -13 136 1 7 1236 1251 72 0 0 chr15 85380929 85381096 -18113878 + (GAAA)n Simple_repeat Simple_repeat 4 170 0 7 1236 882 113 0 0 chr15 85381109 85381242 -18113732 + (GAAA)n Simple_repeat Simple_repeat 4 136 0 7 1236 292 342 77 5 chr15 85381242 85381436 -18113538 + L1MB5 LINE L1 5791 5998 -176 7 1236 366 186 0 0 chr15 85383626 85383712 -18111262 + (TG)n Simple_repeat Simple_repeat 2 87 0 7 1236 192 282 163 49 chr15 85386070 85386193 -18108781 + L3 LINE CR1 4274 4410 -79 7 1236 362 21 0 21 chr15 85386924 85386972 -18108002 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 7 1236 1147 73 0 0 chr15 85386972 85387109 -18107865 - B1_Mus1 SINE Alu -11 137 1 7 1236 1125 88 0 20 chr15 85387717 85387867 -18107107 + B1_Mus1 SINE Alu 2 148 0 7 1236 217 197 197 0 chr15 85389880 85389951 -18105023 + MIRc SINE MIR 85 169 -99 7 1236 1359 284 67 35 chr15 85390179 85390774 -18104200 - L1MB5 LINE L1 -1 6173 5560 7 1236 344 273 164 0 chr15 85390914 85391042 -18103932 + B1F SINE Alu 1 149 0 7 1236 405 222 26 61 chr15 85391083 85391198 -18103776 + PB1D9 SINE Alu 9 119 -1 7 1236 225 0 0 0 chr15 85391199 85391224 -18103750 + (TAA)n Simple_repeat Simple_repeat 1 25 0 7 1236 1310 311 66 16 chr15 85392543 85393122 -18101852 + L1MB5 LINE L1 5566 6173 -1 7 1236 532 262 61 41 chr15 85393702 85393849 -18101125 - RSINE1 SINE B4 -5 160 11 7 1236 762 163 0 0 chr15 85393857 85394124 -18100850 + CT-rich Low_complexity Low_complexity 1 267 0 7 1236 325 208 37 84 chr15 85394127 85394249 -18100725 - PB1D7 SINE Alu -1 119 6 7 1236 279 0 0 0 chr15 85394318 85394349 -18100625 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 7 1236 229 363 16 71 chr15 85395183 85395367 -18099607 + MIRb SINE MIR 14 187 -81 7 1236 181 40 0 0 chr15 85395941 85395966 -18099008 - L3b LINE CR1 -216 266 242 7 1236 1225 54 0 0 chr15 85396067 85396214 -18098760 + B1_Mus2 SINE Alu 1 147 0 7 1236 261 0 0 0 chr15 85396943 85396972 -18098002 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 1236 218 277 0 0 chr15 85398157 85398204 -18096770 + polypyrimidine Low_complexity Low_complexity 3 49 0 7 1236 569 207 43 0 chr15 85398209 85398325 -18096649 - ID_B1 SINE B4 0 224 104 7 1236 191 240 20 20 chr15 85398670 85398721 -18096253 + MIR3 SINE MIR 109 159 -49 7 1236 184 336 83 8 chr15 85398906 85399038 -18095936 - L3 LINE CR1 -2194 2295 2154 7 1236 423 0 0 0 chr15 85399431 85399478 -18095496 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 1236 231 36 0 0 chr15 85401606 85401634 -18093340 + (CCTA)n Simple_repeat Simple_repeat 2 29 0 7 1236 228 272 116 57 chr15 85401872 85401998 -18092976 + MIRb SINE MIR 1 136 -132 7 1236 480 215 38 0 chr15 85402168 85402277 -18092697 - PB1D10 SINE Alu -21 128 12 8 1236 263 331 28 74 chr15 85402207 85402383 -18092591 - MT2B2 LTR ERVL -343 241 74 8 1236 1882 185 51 18 chr15 85402595 85402986 -18091988 + MTD LTR MaLR 14 417 -2 8 1236 268 281 48 12 chr15 85403143 85403226 -18091748 - L3 LINE CR1 -73 4416 4331 8 1236 333 0 0 0 chr15 85404622 85404659 -18090315 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 1236 297 0 0 0 chr15 85409840 85409873 -18085101 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1236 477 0 0 0 chr15 85409873 85409925 -18085049 + (GA)n Simple_repeat Simple_repeat 2 54 0 8 1236 272 237 96 1 chr15 85410585 85410699 -18084275 + MIR SINE MIR 30 152 -56 8 1236 23 54 0 0 chr15 85411120 85411157 -18083817 + GC_rich Low_complexity Low_complexity 1 37 0 8 1236 32 43 0 0 chr15 85411175 85411221 -18083753 + GC_rich Low_complexity Low_complexity 1 46 0 8 1236 27 29 0 0 chr15 85411401 85411435 -18083539 + GC_rich Low_complexity Low_complexity 1 34 0 8 1236 234 0 0 0 chr15 85413879 85413905 -18081069 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 8 1236 207 100 0 0 chr15 85414452 85414482 -18080492 + (CCA)n Simple_repeat Simple_repeat 1 30 0 8 1236 3371 86 51 0 chr15 85414502 85414778 -18080196 + MT2C_Mm LTR ERVL 1 298 -177 8 1236 378 0 0 0 chr15 85414778 85414820 -18080154 + (TC)n Simple_repeat Simple_repeat 1 42 0 8 1236 3371 86 51 0 chr15 85414820 85414995 -18079979 + MT2C_Mm LTR ERVL 299 474 -1 8 1236 341 292 18 24 chr15 85415041 85415206 -18079768 + (TGGA)n Simple_repeat Simple_repeat 4 167 0 8 1236 1528 215 125 24 chr15 85415206 85415265 -18079709 - MTD LTR MaLR 0 419 335 8 1236 194 0 39 0 chr15 85415265 85415291 -18079683 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 8 1236 1528 215 125 24 chr15 85415291 85415608 -18079366 - MTD LTR MaLR -85 334 5 8 1236 3860 212 68 174 chr15 85415614 85415731 -18079243 - MTD-int LTR MaLR -2 1256 1149 8 1236 706 144 0 56 chr15 85415731 85415856 -18079118 - PB1D9 SINE Alu -1 119 2 8 1236 3860 212 68 174 chr15 85415856 85417143 -18077831 - MTD-int LTR MaLR -110 1148 1 8 1236 1670 176 143 0 chr15 85417143 85417506 -18077468 - MTD LTR MaLR 0 419 5 8 1236 414 326 11 17 chr15 85417511 85417686 -18077288 + (TGGA)n Simple_repeat Simple_repeat 2 175 0 8 1236 279 191 0 0 chr15 85417726 85417789 -18077185 + (TGGA)n Simple_repeat Simple_repeat 1 63 0 8 1236 700 148 15 45 chr15 85417962 85418096 -18076878 - B1_Mur2 SINE Alu -1 148 19 8 1236 287 294 7 106 chr15 85417982 85418123 -18076851 - MT2B LTR ERVL -319 282 156 8 1236 447 274 23 88 chr15 85418422 85418455 -18076519 + CYRA11_Mm Unknown Y-chromosome 144 162 -455 8 1236 940 173 5 46 chr15 85418455 85418649 -18076325 - URR1B DNA MER1_type 0 225 40 8 1236 1257 28 0 14 chr15 85418651 85418798 -18076176 + B1_Mus2 SINE Alu 2 146 -1 8 1236 245 281 58 0 chr15 85418947 85419061 -18075913 + L2c LINE L2 2978 3096 -291 8 1236 198 0 0 0 chr15 85419097 85419119 -18075855 + (CA)n Simple_repeat Simple_repeat 2 23 0 8 1236 1322 198 107 58 chr15 85419674 85420039 -18074935 + MTD LTR MaLR 1 383 -36 8 1236 180 176 0 0 chr15 85421193 85421227 -18073747 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 1236 294 143 0 0 chr15 85421477 85421526 -18073448 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 1236 1805 191 59 23 chr15 85421990 85422383 -18072591 + MTC LTR MaLR 12 407 -14 8 1236 509 310 70 16 chr15 85422625 85422812 -18072162 - MER20 DNA MER1_type -2 217 21 8 1236 328 300 127 5 chr15 85422991 85423163 -18071811 - MLT1J LTR MaLR -332 180 3 8 1236 231 308 37 46 chr15 85423552 85423661 -18071313 - MLT1J LTR MaLR -179 333 226 8 1236 1426 290 70 55 chr15 85423664 85424175 -18070799 + MT2A LTR ERVL 6 524 -9 8 1236 258 340 47 47 chr15 85424239 85424387 -18070587 - MLT1J LTR MaLR -361 151 4 8 1236 804 206 6 59 chr15 85424840 85425010 -18069964 + RSINE1 SINE B4 3 163 -2 8 1236 24 53 0 0 chr15 85425012 85425050 -18069924 + AT_rich Low_complexity Low_complexity 1 38 0 8 1236 339 203 0 0 chr15 85425111 85425185 -18069789 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 8 1236 249 108 0 0 chr15 85425176 85425213 -18069761 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 1236 1231 108 6 11 chr15 85425213 85425391 -18069583 - B2_Mm2 SINE B2 -18 177 1 8 1236 455 211 194 8 chr15 85425392 85425521 -18069453 - ID_B1 SINE B4 -69 155 3 8 1236 842 121 142 76 chr15 85425661 85425858 -18069116 - URR1A DNA MER1_type -16 210 1 8 1236 2317 95 34 31 chr15 85426825 85426876 -18068098 - ORR1A2 LTR MaLR 0 327 286 8 1236 1309 78 89 0 chr15 85426876 85427055 -18067919 - B2_Mm2 SINE B2 0 195 1 8 1236 2317 95 34 31 chr15 85427055 85427329 -18067645 - ORR1A2 LTR MaLR -42 285 1 8 1236 379 251 0 9 chr15 85427376 85427482 -18067492 + ID4 SINE ID 1 105 -47 8 1236 183 71 71 0 chr15 85427634 85427676 -18067298 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 1236 462 116 68 26 chr15 85427697 85427963 -18067011 + (TG)n Simple_repeat Simple_repeat 1 277 0 8 1236 956 247 15 5 chr15 85427963 85428162 -18066812 - B3 SINE B2 -14 202 2 8 1236 469 160 11 0 chr15 85428601 85428695 -18066279 + RMER4B LTR ERVK 17 111 -474 8 1236 1561 106 4 13 chr15 85428677 85428915 -18066059 + RMER12 LTR ERVK 507 742 -580 8 1236 1085 120 151 19 chr15 85428920 85429132 -18065842 - MTC LTR MaLR -181 240 1 8 1236 351 179 0 0 chr15 85429137 85429204 -18065770 + (ATG)n Simple_repeat Simple_repeat 2 68 0 8 1236 22 56 0 0 chr15 85431092 85431128 -18063846 + GC_rich Low_complexity Low_complexity 1 36 0 8 1236 867 126 89 0 chr15 85432099 85432234 -18062740 + B1_Mus1 SINE Alu 2 148 0 8 1236 180 65 87 0 chr15 85432236 85432282 -18062692 + A-rich Low_complexity Low_complexity 1 50 0 8 1236 232 232 18 18 chr15 85432406 85432463 -18062511 + ID4_ SINE ID 5 61 -22 8 1236 216 0 0 0 chr15 85432465 85432489 -18062485 + (TGGGGG)n Simple_repeat Simple_repeat 1 24 0 8 1236 382 315 15 37 chr15 85433107 85433242 -18061732 + ID_B1 SINE B4 68 199 -25 8 1236 284 0 28 0 chr15 85433724 85433760 -18061214 + (TC)n Simple_repeat Simple_repeat 2 38 0 8 1236 204 122 0 0 chr15 85433761 85433802 -18061172 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 8 1236 2762 104 46 24 chr15 85433823 85434235 -18060739 + MTC LTR MaLR 1 421 0 8 1236 495 153 15 8 chr15 85434321 85434453 -18060521 + (TCTA)n Simple_repeat Simple_repeat 2 134 0 8 1236 998 133 219 32 chr15 85434478 85434665 -18060309 + URR1A DNA MER1_type 5 226 0 8 1236 663 264 20 134 chr15 85435548 85435802 -18059172 - B4 SINE B4 0 292 68 8 1236 1045 196 5 0 chr15 85437165 85437354 -18057620 + B3 SINE B2 2 191 -25 8 1236 212 143 0 23 chr15 85437415 85437458 -18057516 + (TAA)n Simple_repeat Simple_repeat 2 43 0 8 1236 833 241 40 76 chr15 85437458 85437499 -18057475 + B3 SINE B2 1 41 -175 8 1236 1636 47 0 0 chr15 85437499 85437692 -18057282 + B2_Mm1a SINE B2 1 193 0 8 1236 833 241 40 76 chr15 85437692 85437874 -18057100 + B3 SINE B2 42 216 0 8 1236 485 263 10 0 chr15 85437905 85438004 -18056970 + PB1D10 SINE Alu 3 102 -15 8 1236 960 198 127 0 chr15 85438004 85438216 -18056758 + MTD LTR MaLR 4 242 -177 8 1236 810 144 208 55 chr15 85438269 85438452 -18056522 - B3 SINE B2 -4 212 2 8 1236 198 174 0 0 chr15 85438460 85438506 -18056468 + T-rich Low_complexity Low_complexity 5 50 0 8 1236 787 133 117 0 chr15 85438508 85438636 -18056338 - B1_Mus1 SINE Alu -1 147 5 8 1236 1013 216 43 19 chr15 85440135 85440343 -18054631 - B3 SINE B2 0 216 4 8 1236 197 200 22 22 chr15 85441508 85441554 -18053420 - MIR SINE MIR -59 149 104 8 1236 201 303 0 50 chr15 85441655 85441735 -18053239 - L3 LINE CR1 -2737 1752 1677 8 1236 191 316 12 37 chr15 85442870 85442952 -18052022 + MIR SINE MIR 73 152 -110 8 1236 815 241 84 20 chr15 85443456 85443659 -18051315 - B3 SINE B2 0 216 1 8 1236 255 136 27 77 chr15 85446939 85447122 -18047852 + (CCCA)n Simple_repeat Simple_repeat 3 176 0 8 1236 1180 61 0 0 chr15 85448069 85448217 -18046757 + B1_Mus1 SINE Alu 1 148 0 8 1236 192 40 0 0 chr15 85448237 85448262 -18046712 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 8 1236 208 50 100 0 chr15 85448262 85448302 -18046672 + (GAAA)n Simple_repeat Simple_repeat 1 44 0 8 1236 1082 212 179 25 chr15 85448965 85449289 -18045685 - ORR1D1 LTR MaLR 0 374 1 8 1236 1153 62 0 0 chr15 85449595 85449741 -18045233 - B1_Mm SINE Alu 0 147 2 8 1236 353 245 18 18 chr15 85450490 85450656 -18044318 + (TATATG)n Simple_repeat Simple_repeat 6 171 0 8 1236 699 307 5 56 chr15 85450659 85450873 -18044101 - B4A SINE B4 0 292 90 8 1236 225 308 107 71 chr15 85450878 85450903 -18044071 - B2_Mm2 SINE B2 -20 175 146 8 1236 180 111 0 0 chr15 85450903 85450930 -18044044 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 1236 258 32 0 0 chr15 85450931 85450962 -18044012 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 1236 379 294 108 22 chr15 85450962 85451102 -18043872 - B3A SINE B2 -46 152 2 8 1236 414 260 0 20 chr15 85451102 85451198 -18043776 - B4A SINE B4 -196 96 3 8 1236 235 273 0 29 chr15 85451198 85451254 -18043720 + MTEa LTR MaLR 324 377 -2 8 1236 313 273 98 16 chr15 85451566 85451634 -18043340 + B4 SINE B4 7 82 -142 8 1236 262 238 77 119 chr15 85451634 85451777 -18043197 + B1F2 SINE Alu 1 137 -12 8 1236 263 302 0 0 chr15 85451782 85451845 -18043129 + RSINE1 SINE B4 100 162 -3 8 1236 288 53 0 0 chr15 85451868 85451906 -18043068 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 1236 207 372 108 13 chr15 85452248 85452406 -18042568 - MIR SINE MIR -10 252 80 8 1236 905 137 0 0 chr15 85453380 85453519 -18041455 - B1_Mus2 SINE Alu 0 147 9 8 1236 180 200 0 0 chr15 85453856 85453896 -18041078 + (TTAGGG)n Simple_repeat Simple_repeat 3 42 0 8 1236 460 267 35 0 chr15 85453974 85454146 -18040828 + (TTAGGG)n Simple_repeat Simple_repeat 2 179 0 8 1236 208 286 0 0 chr15 85454173 85454236 -18040738 + (TTAGGG)n Simple_repeat Simple_repeat 1 63 0 8 1236 236 146 0 35 chr15 85454379 85454436 -18040538 + (TTAGGG)n Simple_repeat Simple_repeat 5 59 0 8 1236 262 250 0 116 chr15 85454831 85454926 -18040048 + MT2B LTR ERVL 157 240 -361 8 1236 602 211 0 79 chr15 85454847 85454985 -18039989 + B1_Mur2 SINE Alu 7 133 -16 8 1236 704 118 50 29 chr15 85454985 85455124 -18039850 + ORR1D1 LTR MaLR 1 142 -232 9 1236 395 248 97 67 chr15 85455812 85455946 -18039028 - RSINE1 SINE B4 -11 154 17 9 1236 204 216 0 0 chr15 85457225 85457262 -18037712 + (TG)n Simple_repeat Simple_repeat 1 37 0 9 1236 1075 55 14 14 chr15 85457299 85457446 -18037528 - B1_Mus2 SINE Alu 0 147 1 9 1236 799 260 48 69 chr15 85457964 85458340 -18036634 - ORR1D2 LTR MaLR -1 369 2 9 1236 402 136 0 0 chr15 85458834 85458915 -18036059 + (TG)n Simple_repeat Simple_repeat 2 82 0 9 1237 883 275 30 72 chr15 85459088 85459182 -18035792 + B4 SINE B4 2 86 -206 9 1237 559 204 47 53 chr15 85459182 85459332 -18035642 + B1_Mur1 SINE Alu 1 149 0 9 1237 883 275 30 72 chr15 85459332 85459500 -18035474 + B4 SINE B4 87 253 -39 9 1237 253 279 198 0 chr15 85459692 85459778 -18035196 - L2b LINE L2 -24 3351 3249 9 1237 479 254 24 0 chr15 85460866 85460992 -18033982 + B1F2 SINE Alu 21 149 0 9 1237 1269 180 0 0 chr15 85460993 85461204 -18033770 + B3 SINE B2 2 212 -4 9 1237 840 124 14 14 chr15 85461328 85461467 -18033507 + B1_Mur4 SINE Alu 12 150 0 9 1237 686 175 62 6 chr15 85461475 85461658 -18033316 + B3 SINE B2 7 195 0 9 1237 351 0 0 0 chr15 85462046 85462085 -18032889 + (TC)n Simple_repeat Simple_repeat 2 40 0 9 1237 315 0 0 0 chr15 85462085 85462119 -18032855 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 1237 639 216 14 14 chr15 85462335 85462476 -18032498 + B4A SINE B4 106 246 -46 9 1237 412 317 94 60 chr15 85462612 85462877 -18032097 + B4 SINE B4 1 274 -18 9 1237 963 291 111 45 chr15 85462903 85463726 -18031248 - L1MB4 LINE L1 -50 6130 5254 9 1237 1144 55 0 0 chr15 85463805 85463950 -18031024 + B1_Mm SINE Alu 2 146 -1 9 1237 218 56 28 0 chr15 85463951 85463987 -18030987 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 9 1237 201 74 0 0 chr15 85463984 85464011 -18030963 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 9 1237 698 169 2 23 chr15 85464278 85464419 -18030555 - B1_Mus1 SINE Alu 0 149 9 9 1237 458 292 61 0 chr15 85464300 85464447 -18030527 - B4 SINE B4 -73 219 64 9 1237 180 0 0 0 chr15 85464511 85464531 -18030443 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 9 1237 272 270 0 0 chr15 85464537 85464600 -18030374 - ID SINE ID -157 67 5 9 1237 494 291 39 28 chr15 85466027 85466207 -18028767 - Tigger5 DNA MER2_type -2224 182 1 9 1237 216 0 0 0 chr15 85466741 85466765 -18028209 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 1237 287 192 0 14 chr15 85467142 85467216 -18027758 + CT-rich Low_complexity Low_complexity 3 75 0 9 1237 659 286 32 11 chr15 85467224 85467243 -18027731 - B3A SINE B2 -6 192 174 9 1237 195 100 0 0 chr15 85467243 85467273 -18027701 + (TG)n Simple_repeat Simple_repeat 1 30 0 9 1237 659 286 32 11 chr15 85467273 85467440 -18027534 - B3A SINE B2 -25 173 2 9 1237 1007 224 55 87 chr15 85467500 85467575 -18027399 - B4A SINE B4 -6 286 231 9 1237 975 229 14 9 chr15 85467575 85467787 -18027187 - B3 SINE B2 -3 213 1 9 1237 1007 224 55 87 chr15 85467787 85468000 -18026974 - B4A SINE B4 -62 230 7 9 1237 327 165 152 0 chr15 85468003 85468082 -18026892 + MIRb SINE MIR 110 200 -68 9 1237 266 122 0 0 chr15 85468086 85468135 -18026839 + Lx8 LINE L1 7423 7471 -2 9 1237 2218 46 0 0 chr15 85468164 85468445 -18026529 + L1Md_A LINE L1 6300 6580 -2 9 1237 969 222 0 25 chr15 85468452 85468655 -18026319 + B3A SINE B2 1 198 0 9 1237 1042 129 210 0 chr15 85468813 85468999 -18025975 + URR1A DNA MER1_type 1 225 -1 9 1237 1930 114 9 62 chr15 85469521 85469857 -18025117 - ORR1A3 LTR MaLR -8 318 1 9 1237 306 331 143 24 chr15 85470014 85470308 -18024666 + L1ME2 LINE L1 5733 6061 -103 9 1237 758 258 91 0 chr15 85470373 85470571 -18024403 - ID_B1 SINE B4 0 224 9 9 1237 453 191 0 0 chr15 85472047 85472152 -18022822 + CT-rich Low_complexity Low_complexity 1 105 0 9 1237 505 245 24 83 chr15 85472248 85472417 -18022557 - RSINE1 SINE B4 -1 164 6 9 1237 297 295 39 8 chr15 85472457 85472587 -18022387 + B1_Mur2 SINE Alu 3 136 -13 9 1237 429 264 27 0 chr15 85472682 85472792 -18022182 + PB1D10 SINE Alu 5 117 0 9 1237 1207 85 11 28 chr15 85472796 85472977 -18021997 + B2_Mm1t SINE B2 2 179 -14 9 1237 288 125 425 19 chr15 85473062 85473168 -18021806 + B2_Mm2 SINE B2 47 195 0 9 1237 294 356 79 6 chr15 85473593 85473757 -18021217 - MER45A DNA Tip100 0 178 3 9 1237 334 341 22 7 chr15 85473830 85473969 -18021005 - L1MEg LINE L1 -4132 1952 1812 9 1237 866 251 52 0 chr15 85473969 85474180 -18020794 - ID_B1 SINE B4 0 224 3 9 1237 1031 196 9 70 chr15 85474263 85474493 -18020481 - B3 SINE B2 0 216 1 9 1237 589 206 107 0 chr15 85474504 85474635 -18020339 - B1_Mur1 SINE Alu 0 149 5 9 1237 426 108 0 0 chr15 85474657 85474722 -18020252 + (TG)n Simple_repeat Simple_repeat 1 65 0 9 1237 462 270 117 0 chr15 85474744 85474881 -18020093 - B3A SINE B2 -44 154 2 9 1237 186 167 0 0 chr15 85477118 85477154 -18017820 + C-rich Low_complexity Low_complexity 1 36 0 9 1237 295 276 189 36 chr15 85477746 85477770 -18017204 + ID_B1 SINE B4 68 163 -129 9 1237 573 205 0 26 chr15 85477770 85477885 -18017089 + PB1D9 SINE Alu 9 120 0 9 1237 295 276 189 36 chr15 85477885 85477903 -18017071 + ID_B1 SINE B4 164 246 -46 9 1237 705 201 7 7 chr15 85478222 85478362 -18016612 + B1_Mur2 SINE Alu 2 141 -8 9 1237 608 165 0 57 chr15 85478378 85478500 -18016474 + B3A SINE B2 27 141 -57 9 1237 696 43 0 0 chr15 85478500 85478592 -18016382 + (CA)n Simple_repeat Simple_repeat 2 93 0 9 1237 193 184 0 0 chr15 85479268 85479306 -18015668 - L3 LINE CR1 -117 4372 4335 9 1237 279 325 0 12 chr15 85479804 85479888 -18015086 - MER45A DNA Tip100 -56 122 40 9 1237 837 216 8 0 chr15 85480014 85480267 -18014707 + (TG)n Simple_repeat Simple_repeat 1 255 0 9 1237 279 224 0 0 chr15 85480289 85480365 -18014609 + (TG)n Simple_repeat Simple_repeat 1 76 0 9 1237 200 132 0 26 chr15 85481363 85481402 -18013572 + T-rich Low_complexity Low_complexity 3 40 0 9 1237 314 358 51 7 chr15 85481481 85481619 -18013355 - MLT1D LTR MaLR -359 146 3 9 1237 261 241 0 17 chr15 85481677 85481736 -18013238 + CT-rich Low_complexity Low_complexity 1 58 0 9 1237 180 338 29 14 chr15 85482789 85482858 -18012116 + L2 LINE L2 1323 1392 -2027 9 1237 345 314 32 16 chr15 85482870 85482993 -18011981 - MIRb SINE MIR -119 149 25 9 1237 252 0 0 0 chr15 85483243 85483271 -18011703 + (TG)n Simple_repeat Simple_repeat 1 28 0 9 1237 246 32 0 0 chr15 85485438 85485469 -18009505 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 1237 328 300 75 80 chr15 85485709 85485948 -18009026 - MER33 DNA MER1_type 0 324 87 9 1237 739 211 30 206 chr15 85489514 85489747 -18005227 - B3 SINE B2 0 198 2 9 1237 273 29 0 0 chr15 85490984 85491018 -18003956 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 9 1237 270 136 0 0 chr15 85493546 85493590 -18001384 + (CTG)n Simple_repeat Simple_repeat 1 44 0 9 1237 531 188 0 0 chr15 85494562 85494674 -18000300 + (CA)n Simple_repeat Simple_repeat 2 113 0 9 1237 377 132 83 7 chr15 85495297 85495442 -17999532 + (TA)n Simple_repeat Simple_repeat 2 157 0 9 1237 29 0 0 0 chr15 85496564 85496593 -17998381 + AT_rich Low_complexity Low_complexity 1 29 0 9 1237 360 226 0 0 chr15 85497475 85497568 -17997406 + (TA)n Simple_repeat Simple_repeat 1 93 0 9 1237 445 45 45 0 chr15 85497713 85497780 -17997194 + (GAAA)n Simple_repeat Simple_repeat 3 72 0 9 1237 24 0 0 0 chr15 85500053 85500077 -17994897 + AT_rich Low_complexity Low_complexity 1 24 0 1 1237 202 239 34 34 chr15 85501169 85501316 -17993658 + (CGCGG)n Simple_repeat Simple_repeat 4 150 0 2 1237 22 35 0 0 chr15 85501364 85501393 -17993581 + GC_rich Low_complexity Low_complexity 1 29 0 3 1237 26 64 0 0 chr15 85501695 85501742 -17993232 + GC_rich Low_complexity Low_complexity 1 47 0 4 1237 312 209 0 0 chr15 85503769 85503855 -17991119 + (TA)n Simple_repeat Simple_repeat 2 87 0 5 1237 225 302 89 54 chr15 85504495 85504663 -17990311 + LTR79 LTR ERVL 215 388 -139 6 1237 477 0 0 0 chr15 85505430 85505483 -17989491 + (TTATA)n Simple_repeat Simple_repeat 1 53 0 7 1237 276 30 0 0 chr15 85506463 85506496 -17988478 + (TCC)n Simple_repeat Simple_repeat 2 34 0 8 1237 239 114 23 0 chr15 85507253 85507297 -17987677 + (CAA)n Simple_repeat Simple_repeat 2 46 0 9 1237 522 0 0 0 chr15 85508178 85508236 -17986738 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1237 185 0 40 0 chr15 85510311 85510336 -17984638 + (CCCCCA)n Simple_repeat Simple_repeat 1 26 0 1 1237 21 0 0 0 chr15 85510580 85510601 -17984373 + AT_rich Low_complexity Low_complexity 1 21 0 1 1237 204 156 0 22 chr15 85510798 85510844 -17984130 + T-rich Low_complexity Low_complexity 3 47 0 1 1237 261 0 0 0 chr15 85511265 85511294 -17983680 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1237 561 309 65 13 chr15 85512662 85512816 -17982158 - RSINE1 SINE B4 -3 162 1 1 1237 965 74 0 7 chr15 85513140 85513276 -17981698 + (CATATA)n Simple_repeat Simple_repeat 2 136 0 1 1237 278 178 19 0 chr15 85513988 85514041 -17980933 + MIRc SINE MIR 100 156 -112 1 1237 199 209 23 0 chr15 85516214 85516257 -17978717 - L2b LINE L2 -20 3355 3312 1 1237 267 286 97 46 chr15 85517902 85518040 -17976934 + MIR3 SINE MIR 37 181 -27 1 1237 228 100 0 0 chr15 85518368 85518408 -17976566 + (A)n Simple_repeat Simple_repeat 1 40 0 2 1237 190 272 68 21 chr15 85518648 85518740 -17976234 + MIR SINE MIR 99 197 -71 2 1237 914 182 0 7 chr15 85519696 85519840 -17975134 - B1_Mur1 SINE Alu -2 147 5 2 1237 1579 37 5 0 chr15 85527008 85527197 -17967777 - B2_Mm1a SINE B2 0 193 4 2 1237 445 284 260 0 chr15 85527456 85527625 -17967349 - ID_B1 SINE B4 -1 223 11 2 1237 1048 257 0 9 chr15 85527657 85527873 -17967101 - B3 SINE B2 -2 214 1 2 1237 290 248 76 137 chr15 85528264 85528365 -17966609 + B4 SINE B4 117 215 -77 2 1237 1068 8 0 0 chr15 85528365 85528486 -17966488 + (GAGAA)n Simple_repeat Simple_repeat 4 124 0 2 1237 636 150 49 24 chr15 85528486 85528499 -17966475 + B1_Mur4 SINE Alu 140 150 0 2 1237 261 257 67 13 chr15 85528497 85528572 -17966402 + B1F SINE Alu 68 146 -3 2 1237 290 248 76 137 chr15 85528499 85528515 -17966459 + B4 SINE B4 216 239 -53 2 1237 300 240 132 13 chr15 85528728 85528880 -17966094 - RLTR15 LTR ERVK -3 356 187 3 1237 361 264 126 24 chr15 85528970 85529137 -17965837 - RLTR15 LTR ERVK -175 184 1 3 1237 271 347 71 32 chr15 85532623 85532778 -17962196 - MER96B DNA hAT -206 211 51 3 1237 22 0 0 0 chr15 85533711 85533733 -17961241 + GC_rich Low_complexity Low_complexity 1 22 0 3 1237 214 143 179 0 chr15 85537220 85537276 -17957698 + MIR SINE MIR 88 153 -55 3 1237 354 324 49 14 chr15 85538693 85538837 -17956137 - L2c LINE L2 -178 3209 3061 3 1237 2286 104 49 0 chr15 85539039 85539346 -17955628 - ORR1A3 LTR MaLR -4 322 1 3 1237 477 0 0 0 chr15 85540658 85540711 -17954263 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 1237 266 373 29 22 chr15 85542016 85542153 -17952821 - MIR3 SINE MIR -63 145 8 3 1237 365 295 120 8 chr15 85543500 85543633 -17951341 + MTD LTR MaLR 260 407 -12 3 1237 1433 74 26 5 chr15 85543771 85543962 -17951012 - B2_Mm2 SINE B2 0 195 1 3 1237 4803 142 39 94 chr15 85544044 85544999 -17949975 - RLTR13D6 LTR ERVK 0 902 1 4 1237 555 90 0 0 chr15 85545003 85545081 -17949893 + (TTCC)n Simple_repeat Simple_repeat 1 78 0 4 1237 1108 112 17 45 chr15 85545081 85545102 -17949872 - B2_Mm1a SINE B2 -19 174 161 4 1237 261 83 0 0 chr15 85545102 85545138 -17949836 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 4 1237 1108 112 17 45 chr15 85545138 85545294 -17949680 - B2_Mm1a SINE B2 -33 160 2 4 1237 1559 212 134 6 chr15 85546209 85546579 -17948395 - MTD LTR MaLR -16 403 1 4 1237 1281 127 53 62 chr15 85547153 85547379 -17947595 + URR1B DNA MER1_type 1 224 -1 4 1237 1475 64 5 21 chr15 85548015 85548206 -17946768 + B2_Mm1t SINE B2 1 188 -5 4 1237 195 278 156 9 chr15 85548742 85548851 -17946123 - L2c LINE L2 -248 3139 3015 4 1237 233 313 44 30 chr15 85550946 85551081 -17943893 - ORR1A3-int LTR MaLR -488 1475 1339 4 1237 193 333 41 14 chr15 85551617 85551690 -17943284 + MIRb SINE MIR 118 192 -76 4 1237 422 180 10 0 chr15 85551915 85552015 -17942959 + CT-rich Low_complexity Low_complexity 2 102 0 5 1237 233 179 134 0 chr15 85553894 85553961 -17941013 - L1MC4 LINE L1 -750 7292 7217 5 1237 561 30 0 0 chr15 85553974 85554041 -17940933 + (TAA)n Simple_repeat Simple_repeat 1 67 0 5 1237 853 161 0 14 chr15 85554046 85554191 -17940783 - B1_Mur4 SINE Alu -7 143 1 5 1237 290 290 21 11 chr15 85555923 85556017 -17938957 + B4A SINE B4 41 135 -157 5 1237 358 53 35 0 chr15 85556071 85556128 -17938846 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 1237 1833 129 66 51 chr15 85557030 85557364 -17937610 + ORR1B2 LTR MaLR 1 339 -28 5 1237 544 30 0 0 chr15 85557363 85557430 -17937544 + B1_Mm SINE Alu 81 147 0 5 1237 256 94 19 19 chr15 85557430 85557484 -17937490 + (TAAAA)n Simple_repeat Simple_repeat 5 58 0 5 1237 1088 91 39 7 chr15 85557562 85557717 -17937257 - B2_Mm1t SINE B2 -33 160 1 5 1237 217 274 108 14 chr15 85557824 85557898 -17937076 + RSINE1 SINE B4 2 82 -83 6 1237 222 37 0 0 chr15 85557959 85557986 -17936988 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 1237 1206 250 45 19 chr15 85558034 85558303 -17936671 + B4 SINE B4 6 281 -11 6 1237 749 211 13 39 chr15 85560189 85560342 -17934632 + B1_Mur4 SINE Alu 1 149 -1 6 1237 1244 14 7 0 chr15 85560929 85561070 -17933904 + B1_Mus1 SINE Alu 5 146 -2 6 1237 1389 61 0 0 chr15 85561070 85561250 -17933724 + (GAA)n Simple_repeat Simple_repeat 1 180 0 6 1237 488 265 97 56 chr15 85561510 85561726 -17933248 - MER44A DNA MER2_type -31 308 84 6 1237 653 199 6 76 chr15 85561764 85561922 -17933052 - B1_Mur3 SINE Alu -1 148 2 6 1237 237 65 0 0 chr15 85562043 85562074 -17932900 + (T)n Simple_repeat Simple_repeat 1 31 0 6 1237 1230 62 0 0 chr15 85562078 85562224 -17932750 - B1_Mus2 SINE Alu 0 147 2 6 1237 217 295 0 0 chr15 85562960 85563021 -17931953 + MIRb SINE MIR 125 185 -83 7 1237 273 98 0 0 chr15 85564552 85564593 -17930381 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1237 556 196 0 0 chr15 85564593 85564685 -17930289 - RSINE1 SINE B4 -63 102 11 7 1237 408 289 28 37 chr15 85567825 85567933 -17927041 - B1F SINE Alu -14 135 29 7 1237 287 212 12 0 chr15 85567983 85568068 -17926906 + (TATG)n Simple_repeat Simple_repeat 3 88 0 7 1237 917 118 14 29 chr15 85568372 85568511 -17926463 + B1_Mur4 SINE Alu 1 137 -13 7 1237 1130 108 11 0 chr15 85568536 85568712 -17926262 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 7 1237 1287 84 0 0 chr15 85568722 85568900 -17926074 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 7 1237 734 251 99 15 chr15 85568914 85569116 -17925858 + ID_B1 SINE B4 3 221 -3 7 1237 742 264 0 0 chr15 85569121 85569269 -17925705 + B1_Mur1 SINE Alu 1 148 -1 7 1237 326 236 28 129 chr15 85569652 85569818 -17925156 + MT2B LTR ERVL 106 264 -320 8 1237 878 141 15 0 chr15 85569711 85569846 -17925128 + B1_Mur1 SINE Alu 6 142 -7 8 1237 486 49 0 0 chr15 85570279 85570340 -17924634 + (TG)n Simple_repeat Simple_repeat 1 61 0 8 1237 232 328 16 0 chr15 85571035 85571099 -17923875 - RMER30 DNA MER1_type 0 202 138 8 1237 1339 136 63 31 chr15 85571153 85571445 -17923529 + MTB_Mm LTR MaLR 1 409 -12 8 1237 450 127 0 0 chr15 85571965 85572036 -17922938 + (TG)n Simple_repeat Simple_repeat 2 72 0 8 1237 1341 162 10 14 chr15 85572131 85572338 -17922636 - B3 SINE B2 -1 215 10 8 1237 1198 55 0 27 chr15 85573503 85573653 -17921321 - B1_Mus2 SINE Alu 0 147 2 8 1237 210 37 0 0 chr15 85573706 85573733 -17921241 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 1237 428 263 21 0 chr15 85573959 85574054 -17920920 + B1F SINE Alu 1 97 -52 8 1237 567 0 0 0 chr15 85575165 85575228 -17919746 + (CA)n Simple_repeat Simple_repeat 1 63 0 9 1237 201 241 50 33 chr15 85575316 85575376 -17919598 + MIR SINE MIR 113 173 -89 9 1237 192 215 215 0 chr15 85575589 85575654 -17919320 + L2b LINE L2 3108 3186 -189 9 1237 186 312 0 0 chr15 85575679 85575775 -17919199 + (TG)n Simple_repeat Simple_repeat 1 96 0 9 1237 299 25 25 0 chr15 85575970 85576010 -17918964 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 1237 231 106 0 60 chr15 85576010 85576060 -17918914 - B4A SINE B4 0 292 246 9 1237 225 244 0 109 chr15 85576069 85576096 -17918878 - B3A SINE B2 -1 197 148 9 1237 236 260 80 0 chr15 85576096 85576146 -17918828 - RSINE1 SINE B4 0 165 112 9 1237 225 244 0 109 chr15 85576146 85576161 -17918813 - B3A SINE B2 -1 147 116 9 1237 308 330 82 33 chr15 85576201 85576227 -17918747 - B3A SINE B2 -6 192 170 9 1237 690 106 24 0 chr15 85576227 85576350 -17918624 + (TG)n Simple_repeat Simple_repeat 1 126 0 9 1237 308 330 82 33 chr15 85576350 85576445 -17918529 - B3A SINE B2 -29 169 65 9 1237 576 265 95 56 chr15 85576460 85576692 -17918282 - B4A SINE B4 -51 241 1 1 1237 317 333 46 0 chr15 85576795 85576903 -17918071 - L2b LINE L2 0 3375 3263 1 1237 444 313 59 42 chr15 85578336 85578623 -17916351 - B4 SINE B4 0 292 1 1 1237 567 0 0 0 chr15 85578793 85578856 -17916118 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 1237 213 121 0 0 chr15 85579285 85579318 -17915656 + (GGAGAA)n Simple_repeat Simple_repeat 6 38 0 1 1237 458 283 31 19 chr15 85579394 85579556 -17915418 + Tigger6b DNA MER2_type 227 390 -1207 1 1237 484 309 126 54 chr15 85579564 85580008 -17914966 + L1MA9 LINE L1 5396 5871 -441 1 1237 1040 116 0 58 chr15 85580012 85580168 -17914806 + B1_Mur4 SINE Alu 3 149 -1 1 1237 184 59 0 56 chr15 85580169 85580205 -17914769 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 1 1237 615 266 107 26 chr15 85580827 85581097 -17913877 + B4A SINE B4 1 292 0 1 1237 855 205 108 0 chr15 85581333 85581518 -17913456 + B3 SINE B2 1 205 -11 1 1237 26 0 0 0 chr15 85581521 85581547 -17913427 + AT_rich Low_complexity Low_complexity 1 26 0 1 1237 661 206 75 15 chr15 85581555 85581688 -17913286 + B1_Mus2 SINE Alu 6 146 -1 1 1237 424 334 102 104 chr15 85581720 85582161 -17912813 + L1M5 LINE L1 3723 4162 -1984 1 1237 321 319 89 35 chr15 85582187 85582356 -17912618 + L1M5 LINE L1 5161 5338 -808 1 1237 610 285 47 41 chr15 85582640 85582980 -17911994 + L1MC2 LINE L1 5891 6232 -112 1 1237 1647 222 108 19 chr15 85583140 85583512 -17911462 + MTD LTR MaLR 1 405 -14 1 1237 772 224 42 18 chr15 85583526 85583694 -17911280 + MT2A LTR ERVL 283 454 -79 1 1237 192 77 0 0 chr15 85583706 85583732 -17911242 + (ATG)n Simple_repeat Simple_repeat 3 28 0 1 1237 1250 82 34 8 chr15 85583735 85584240 -17910734 + (TAGA)n Simple_repeat Simple_repeat 1 518 0 1 1237 561 52 0 0 chr15 85584336 85584413 -17910561 + (TTCC)n Simple_repeat Simple_repeat 2 78 0 1 1237 844 164 7 29 chr15 85584414 85584552 -17910422 - B1_Mur1 SINE Alu -10 139 5 1 1237 180 0 0 0 chr15 85584775 85584795 -17910179 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 1237 423 0 0 0 chr15 85584795 85584841 -17910133 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 1237 238 303 90 10 chr15 85585149 85585249 -17909725 - L2a LINE L2 -4 3422 3315 1 1237 194 298 22 87 chr15 85585767 85585859 -17909115 + MIRc SINE MIR 18 103 -165 1 1237 198 0 0 0 chr15 85586377 85586399 -17908575 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1237 642 285 88 58 chr15 85586455 85586519 -17908455 - B4A SINE B4 -4 288 222 1 1237 1281 83 67 0 chr15 85586519 85586699 -17908275 - B2_Mm1t SINE B2 -1 192 1 1 1237 642 285 88 58 chr15 85586699 85586839 -17908135 - B4A SINE B4 -71 221 78 1 1237 1419 76 22 0 chr15 85587510 85587695 -17907279 + B2_Mm2 SINE B2 2 190 -5 1 1237 228 111 0 0 chr15 85587918 85587954 -17907020 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1237 336 341 17 43 chr15 85588044 85588274 -17906700 - L1MD2 LINE L1 -458 5901 5678 1 1237 198 0 0 0 chr15 85588306 85588328 -17906646 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1237 615 246 40 46 chr15 85588350 85588525 -17906449 - B3A SINE B2 -23 175 2 1 1237 224 91 0 29 chr15 85588821 85588855 -17906119 + PB1D9 SINE Alu 82 114 -6 1 1237 286 279 81 92 chr15 85589341 85589602 -17905372 - L1MD2 LINE L1 -2261 3885 3628 1 1237 1173 225 112 23 chr15 85589708 85590013 -17904961 + MTD LTR MaLR 75 406 -13 1 1238 257 315 15 30 chr15 85590025 85590159 -17904815 - L1MD2 LINE L1 -2536 3610 3479 1 1238 990 292 45 45 chr15 85590266 85590826 -17904148 - L1MD2 LINE L1 -2894 3252 2693 1 1238 356 352 85 15 chr15 85590900 85591171 -17903803 + B4A SINE B4 1 290 -2 1 1238 581 245 0 8 chr15 85591177 85591419 -17903555 + (TATATG)n Simple_repeat Simple_repeat 1 239 0 1 1238 263 329 24 0 chr15 85591443 85591525 -17903449 - MLT1A0 LTR MaLR -25 340 257 1 1238 406 227 21 20 chr15 85591614 85591724 -17903250 - MLT1A0 LTR MaLR -251 114 5 1 1238 284 293 147 37 chr15 85591736 85591927 -17903047 - L1MD2 LINE L1 -3481 2665 2454 1 1238 698 246 120 5 chr15 85592332 85592492 -17902482 + B3 SINE B2 1 166 -50 1 1238 572 62 0 12 chr15 85592492 85592574 -17902400 + (TA)n Simple_repeat Simple_repeat 2 82 0 1 1238 261 0 0 0 chr15 85592574 85592602 -17902372 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1238 698 246 120 5 chr15 85592602 85592624 -17902350 + B3 SINE B2 167 203 -13 1 1238 797 256 37 63 chr15 85592786 85593086 -17901888 + B4A SINE B4 1 292 0 1 1238 1407 296 80 40 chr15 85593538 85594328 -17900646 + L1MEc LINE L1 465 1285 -5115 1 1238 1185 217 174 26 chr15 85594336 85594681 -17900293 - MTD LTR MaLR -1 418 23 1 1238 835 296 60 42 chr15 85594747 85595326 -17899648 + L1MEc LINE L1 2634 3223 -3096 1 1238 849 301 13 58 chr15 85595357 85595583 -17899391 + B4A SINE B4 14 229 -63 1 1238 658 259 82 168 chr15 85595583 85596024 -17898950 + Lx8 LINE L1 6973 7358 -115 1 1238 702 0 0 0 chr15 85596024 85596102 -17898872 + (GA)n Simple_repeat Simple_repeat 2 79 0 1 1238 658 259 82 168 chr15 85596102 85596208 -17898766 + Lx8 LINE L1 7359 7473 0 1 1238 273 289 12 73 chr15 85596227 85596309 -17898665 + B4A SINE B4 216 292 0 1 1238 669 287 109 77 chr15 85596332 85596507 -17898467 + L1MC LINE L1 3059 3228 -2918 1 1238 495 0 0 0 chr15 85596507 85596562 -17898412 + (TTTA)n Simple_repeat Simple_repeat 1 55 0 1 1238 669 287 109 77 chr15 85596562 85596763 -17898211 + L1MC LINE L1 3229 3447 -2699 1 1238 360 314 102 26 chr15 85596775 85597157 -17897817 + L1M2 LINE L1 3514 3924 -2219 1 1238 300 332 34 62 chr15 85597305 85597690 -17897284 + L1M4 LINE L1 4965 5338 -808 1 1238 495 0 0 0 chr15 85597779 85597834 -17897140 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1238 331 220 26 0 chr15 85597987 85598074 -17896900 + L1M4 LINE L1 5517 5605 -574 1 1238 722 208 168 6 chr15 85598075 85598254 -17896720 + B3 SINE B2 1 208 -8 1 1238 1074 95 0 0 chr15 85598385 85598522 -17896452 + B1_Mus1 SINE Alu 2 138 -10 1 1238 255 224 17 0 chr15 85598569 85598627 -17896347 + L1M4 LINE L1 5733 5791 -653 1 1238 965 143 0 14 chr15 85598901 85599043 -17895931 + B1_Mur1 SINE Alu 2 141 -8 1 1238 900 250 105 8 chr15 85599135 85599393 -17895581 - B4 SINE B4 -9 283 1 1 1238 554 332 18 18 chr15 85599442 85599678 -17895296 + MIR SINE MIR 27 259 -9 1 1238 321 283 20 29 chr15 85600419 85600521 -17894453 - B4 SINE B4 -152 140 40 1 1238 387 0 0 0 chr15 85601698 85601741 -17893233 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 1238 749 56 0 9 chr15 85603122 85603230 -17891744 + (TTTC)n Simple_repeat Simple_repeat 2 108 0 1 1238 208 208 19 19 chr15 85603334 85603388 -17891586 + CT-rich Low_complexity Low_complexity 2 55 0 1 1238 442 208 52 10 chr15 85603395 85603492 -17891482 - PB1D10 SINE Alu -5 112 12 1 1238 483 18 0 0 chr15 85603492 85603548 -17891426 + (GTTTG)n Simple_repeat Simple_repeat 2 57 0 1 1238 851 203 0 0 chr15 85603548 85603686 -17891288 - B1_Mur2 SINE Alu -11 138 1 1 1238 420 20 0 0 chr15 85603989 85604038 -17890936 + (TTA)n Simple_repeat Simple_repeat 3 51 0 1 1238 222 37 0 0 chr15 85605359 85605386 -17889588 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1238 237 239 27 40 chr15 85605592 85605666 -17889308 + ID SINE ID 2 74 -150 1 1238 1053 257 47 35 chr15 85605872 85606130 -17888844 - B4A SINE B4 -30 262 2 1 1238 239 0 32 0 chr15 85606275 85606306 -17888668 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 1238 189 107 0 0 chr15 85606300 85606328 -17888646 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1 1238 1094 52 0 7 chr15 85606328 85606464 -17888510 - B1_Mus2 SINE Alu -1 146 12 1 1238 498 203 0 115 chr15 85606363 85606543 -17888431 - MT2B LTR ERVL -320 264 103 1 1238 207 185 0 53 chr15 85606656 85606713 -17888261 + C-rich Low_complexity Low_complexity 1 54 0 1 1238 237 158 0 50 chr15 85607011 85607071 -17887903 + T-rich Low_complexity Low_complexity 3 59 0 1 1238 277 275 147 0 chr15 85607222 85607331 -17887643 + L2a LINE L2 2957 3081 -345 1 1238 901 214 68 29 chr15 85607609 85607816 -17887158 - B3 SINE B2 -1 215 1 1 1238 549 0 0 0 chr15 85608220 85608281 -17886693 + (TC)n Simple_repeat Simple_repeat 2 62 0 1 1238 313 376 131 48 chr15 85608285 85608333 -17886641 - L1ME2 LINE L1 -101 6077 6025 1 1238 1198 68 0 0 chr15 85608333 85608480 -17886494 + B1_Mus2 SINE Alu 1 147 0 1 1238 448 376 131 48 chr15 85608480 85608906 -17886068 - L1ME2 LINE L1 -154 6024 5564 1 1238 1338 65 43 0 chr15 85609141 85609165 -17885809 - B2_Mm1a SINE B2 0 193 162 1 1238 387 0 0 0 chr15 85609165 85609208 -17885766 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 1 1238 1338 65 43 0 chr15 85609208 85609367 -17885607 - B2_Mm1a SINE B2 -32 161 3 1 1238 1165 62 7 0 chr15 85609369 85609515 -17885459 - B1_Mus1 SINE Alu 0 148 2 1 1238 465 314 34 12 chr15 85609549 85609882 -17885092 - L1ME2 LINE L1 -2579 5416 5079 1 1238 405 0 0 0 chr15 85610220 85610265 -17884709 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1238 519 226 0 0 chr15 85610398 85610531 -17884443 + (TG)n Simple_repeat Simple_repeat 1 133 0 1 1238 856 232 22 6 chr15 85610531 85610709 -17884265 - B3A SINE B2 -16 182 2 1 1238 759 189 247 6 chr15 85610744 85610914 -17884060 - B3 SINE B2 -1 215 5 1 1238 350 324 97 17 chr15 85610935 85610973 -17884001 - L1ME2 LINE L1 -1519 4627 4577 1 1238 339 25 0 0 chr15 85610973 85611013 -17883961 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1238 350 324 97 17 chr15 85611013 85611263 -17883711 - L1ME2 LINE L1 -1570 4576 4317 1 1238 1152 62 0 0 chr15 85611330 85611474 -17883500 + B2_Mm2 SINE B2 2 145 -50 1 1238 405 0 0 0 chr15 85611475 85611520 -17883454 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 1 1238 429 302 95 57 chr15 85611536 85611931 -17883043 - L1ME2 LINE L1 -1909 4237 3884 1 1238 781 212 27 7 chr15 85611931 85612078 -17882896 - B1_Mur4 SINE Alu 0 150 1 1 1238 316 302 107 113 chr15 85612078 85612414 -17882560 - L1ME2 LINE L1 -2263 3883 3511 1 1238 754 106 0 16 chr15 85612426 85612551 -17882423 + (TCCC)n Simple_repeat Simple_repeat 3 125 0 1 1238 526 182 68 60 chr15 85612551 85612668 -17882306 - PB1D9 SINE Alu -1 119 2 1 1238 472 336 143 69 chr15 85612883 85613331 -17881643 - MLT2B3 LTR ERVL -45 509 29 1 1238 425 310 16 90 chr15 85613170 85613358 -17881616 - MTEa LTR MaLR -193 186 13 1 1238 322 355 18 18 chr15 85613366 85613475 -17881499 - L1MEc LINE L1 -2729 3590 3482 1 1238 771 269 45 0 chr15 85613488 85613689 -17881285 - MTE2a LTR MaLR 0 379 170 1 1238 924 242 11 5 chr15 85613715 85613902 -17881072 - B3 SINE B2 -28 188 1 1 1238 391 228 21 52 chr15 85613902 85613992 -17880982 - MTE2a LTR MaLR -200 179 93 1 1238 874 279 55 20 chr15 85614003 85614296 -17880678 - L1M2 LINE L1 -496 5795 5493 1 1238 270 0 0 0 chr15 85614305 85614335 -17880639 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1238 581 301 106 34 chr15 85614354 85614891 -17880083 - L1MEc LINE L1 -5238 1162 587 1 1238 492 72 0 0 chr15 85615027 85615096 -17879878 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 1238 353 207 0 65 chr15 85615226 85615319 -17879655 - B1_Mur4 SINE Alu -21 129 43 2 1238 434 349 37 69 chr15 85615344 85615665 -17879309 + B4 SINE B4 2 273 -19 2 1238 554 89 7 63 chr15 85615721 85615788 -17879186 + polypurine Low_complexity Low_complexity 3 65 0 2 1238 1202 100 0 6 chr15 85615788 85615969 -17879005 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 1238 554 89 7 63 chr15 85615969 85616044 -17878930 + polypurine Low_complexity Low_complexity 66 137 0 2 1238 1182 50 5 27 chr15 85616047 85616231 -17878743 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 1238 452 321 60 44 chr15 85616333 85616576 -17878398 - L1MC LINE L1 -767 5577 5323 2 1238 844 164 42 63 chr15 85616576 85616765 -17878209 - B2_Mm2 SINE B2 -9 186 2 2 1238 452 284 83 60 chr15 85616765 85616910 -17878064 - L1MC LINE L1 -819 5327 5175 2 1238 222 62 0 0 chr15 85617064 85617096 -17877878 + (TCTCTG)n Simple_repeat Simple_repeat 3 34 0 2 1238 301 356 11 0 chr15 85617097 85617184 -17877790 - PB1D10 SINE Alu -26 91 4 2 1238 894 236 14 23 chr15 85619087 85619308 -17875666 + ID_B1 SINE B4 2 220 -4 2 1238 395 175 39 7 chr15 85619896 85620051 -17874923 + (TCTA)n Simple_repeat Simple_repeat 4 163 0 2 1238 626 210 6 106 chr15 85620066 85620206 -17874768 - B1F2 SINE Alu 0 149 26 2 1238 550 219 0 26 chr15 85620206 85620323 -17874651 + PB1D10 SINE Alu 4 117 0 2 1238 536 260 90 75 chr15 85620328 85620540 -17874434 + ID_B1 SINE B4 4 218 -6 2 1238 814 164 13 13 chr15 85620540 85621009 -17873965 + (TAGA)n Simple_repeat Simple_repeat 1 469 0 2 1238 970 149 42 47 chr15 85622393 85622583 -17872391 - URR1A DNA MER1_type -4 222 34 2 1238 1017 270 63 22 chr15 85622937 85623206 -17871768 + B4A SINE B4 1 280 -12 2 1238 255 79 0 0 chr15 85623252 85623290 -17871684 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1238 279 71 0 0 chr15 85623709 85623751 -17871223 + (CAGAGA)n Simple_repeat Simple_repeat 3 44 0 2 1238 401 274 48 10 chr15 85623755 85623858 -17871116 - PB1D7 SINE Alu -12 108 2 2 1238 748 207 187 43 chr15 85623886 85624073 -17870901 - B3 SINE B2 -2 214 1 2 1238 864 200 69 17 chr15 85624102 85624275 -17870699 - B3A SINE B2 -16 182 1 2 1238 1920 125 231 3 chr15 85624598 85624919 -17870055 - ORR1B1 LTR MaLR 0 394 1 2 1238 457 250 28 28 chr15 85624921 85625065 -17869909 - MER2 DNA MER2_type -93 252 109 2 1238 23 33 0 0 chr15 85625185 85625215 -17869759 + AT_rich Low_complexity Low_complexity 1 30 0 2 1238 652 225 16 130 chr15 85625218 85625402 -17869572 - RSINE1 SINE B4 0 165 3 2 1238 261 0 0 0 chr15 85625472 85625501 -17869473 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1238 501 17 0 0 chr15 85625581 85625639 -17869335 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1238 725 254 38 38 chr15 85625728 85625937 -17869037 - B3 SINE B2 -7 209 1 2 1238 318 308 38 15 chr15 85626450 85626582 -17868392 - L1MA5 LINE L1 -24 6276 6142 2 1238 306 291 146 0 chr15 85626735 85626900 -17868074 - L1MA5 LINE L1 -434 5866 5678 2 1238 967 193 351 7 chr15 85626923 85627199 -17867775 - MTEa LTR MaLR -4 375 5 2 1238 351 0 0 0 chr15 85627199 85627238 -17867736 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1238 198 0 0 0 chr15 85627240 85627262 -17867712 + (GA)n Simple_repeat Simple_repeat 2 23 0 2 1238 685 306 6 23 chr15 85627563 85627737 -17867237 - B3A SINE B2 -27 171 1 2 1238 727 236 79 20 chr15 85627809 85628012 -17866962 - B3 SINE B2 0 216 2 2 1238 1170 224 19 89 chr15 85629687 85630001 -17864973 + B4 SINE B4 1 292 0 2 1238 21 0 0 0 chr15 85630017 85630038 -17864936 + AT_rich Low_complexity Low_complexity 1 21 0 2 1238 1029 131 0 0 chr15 85630061 85630198 -17864776 + B1_Mur4 SINE Alu 3 139 -11 2 1238 882 220 5 86 chr15 85630237 85630446 -17864528 + B3A SINE B2 1 192 -6 2 1238 434 185 0 115 chr15 85630451 85630555 -17864419 + MT2B LTR ERVL 173 264 -337 2 1238 1031 25 0 0 chr15 85630462 85630583 -17864391 + B1_Mm SINE Alu 20 140 -7 2 1238 369 0 0 0 chr15 85630586 85630627 -17864347 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 2 1238 204 125 0 0 chr15 85630686 85630718 -17864256 + (TGGA)n Simple_repeat Simple_repeat 4 35 0 2 1238 1011 147 0 13 chr15 85630888 85631040 -17863934 + B1_Mur4 SINE Alu 1 150 0 2 1238 209 30 0 57 chr15 85632594 85632629 -17862345 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 2 1238 258 81 0 0 chr15 85632803 85632840 -17862134 + (TTG)n Simple_repeat Simple_repeat 2 38 0 2 1238 255 296 62 44 chr15 85633148 85633178 -17861796 + PB1D9 SINE Alu 5 119 -1 2 1238 310 305 0 12 chr15 85633178 85633261 -17861713 + ID_B1 SINE B4 142 223 -1 2 1238 215 333 11 11 chr15 85633370 85633461 -17861513 + CT-rich Low_complexity Low_complexity 4 94 0 2 1238 24 0 0 0 chr15 85634940 85634964 -17860010 + GC_rich Low_complexity Low_complexity 1 24 0 2 1238 21 0 0 0 chr15 85637082 85637103 -17857871 + AT_rich Low_complexity Low_complexity 1 21 0 2 1238 26 30 0 0 chr15 85637248 85637281 -17857693 + AT_rich Low_complexity Low_complexity 1 33 0 2 1238 511 261 81 0 chr15 85640044 85640155 -17854819 - RSINE1 SINE B4 -42 123 4 2 1238 53 30 0 0 chr15 85640159 85640226 -17854748 + AT_rich Low_complexity Low_complexity 1 67 0 2 1238 1237 114 22 0 chr15 85640226 85640410 -17854564 - B2_Mm1t SINE B2 -4 189 2 2 1238 497 232 40 0 chr15 85640471 85640570 -17854404 - RSINE1 SINE B4 -61 104 2 2 1238 229 103 26 0 chr15 85640573 85640612 -17854362 - L1MCc LINE L1 -5195 1842 1803 2 1238 262 335 42 37 chr15 85640667 85640856 -17854118 - L1MCc LINE L1 -4894 1529 1340 2 1238 229 306 14 0 chr15 85642413 85642485 -17852489 - RMER15 LTR ERVL -78 497 425 2 1238 1505 255 77 53 chr15 85642711 85643257 -17851717 - RMER15-int LTR ERVL -7 4992 4434 2 1238 512 281 139 6 chr15 85643268 85643440 -17851534 - RMER15-int LTR ERVL -620 4379 4185 2 1238 519 95 0 0 chr15 85643440 85643514 -17851460 + (TTTC)n Simple_repeat Simple_repeat 4 77 0 2 1238 985 136 107 6 chr15 85643515 85643692 -17851282 - B2_Mm2 SINE B2 0 195 1 2 1238 1006 265 217 7 chr15 85644002 85644462 -17850512 + Lx8 LINE L1 6915 7471 -2 2 1238 847 196 0 14 chr15 85644473 85644613 -17850361 + B1_Mur1 SINE Alu 1 138 -11 2 1238 1019 103 0 6 chr15 85644613 85644769 -17850205 + (GAAA)n Simple_repeat Simple_repeat 2 156 0 2 1238 842 168 0 57 chr15 85644812 85644970 -17850004 + B1_Mur4 SINE Alu 1 149 -1 2 1238 24 0 0 0 chr15 85644991 85645015 -17849959 + AT_rich Low_complexity Low_complexity 1 24 0 2 1238 203 167 0 0 chr15 85652907 85652949 -17842025 + (GTTTG)n Simple_repeat Simple_repeat 2 43 0 2 1238 351 65 0 0 chr15 85652975 85653021 -17841953 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 2 1238 242 333 16 0 chr15 85653036 85653099 -17841875 - B1F1 SINE Alu -85 64 1 2 1238 620 132 0 9 chr15 85653265 85653372 -17841602 + (TCC)n Simple_repeat Simple_repeat 3 108 0 2 1238 314 267 149 42 chr15 85653374 85653542 -17841432 - L1MD LINE L1 -3125 3021 2836 2 1238 936 35 170 20 chr15 85653553 85653692 -17841282 + B2_Mm2 SINE B2 1 162 -33 2 1238 234 0 0 0 chr15 85653692 85653718 -17841256 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 2 1238 235 300 77 32 chr15 85653732 85653887 -17841087 - L1M4 LINE L1 -3321 2825 2664 2 1238 302 166 4 8 chr15 85653957 85654022 -17840952 - PB1 SINE Alu -2 125 51 2 1238 298 280 78 36 chr15 85654208 85654395 -17840579 - L1M4 LINE L1 -3638 2508 2317 2 1238 467 221 176 42 chr15 85654569 85654711 -17840263 - RSINE1 SINE B4 -2 163 3 2 1238 1307 66 22 22 chr15 85655055 85655240 -17839734 - B2_Mm2 SINE B2 -9 186 2 2 1238 626 301 35 25 chr15 85656204 85656402 -17838572 + B4 SINE B4 91 290 -2 2 1238 1136 211 9 19 chr15 85656454 85656667 -17838307 + B3 SINE B2 1 211 -5 2 1238 213 139 0 0 chr15 85656700 85656743 -17838231 + (T)n Simple_repeat Simple_repeat 1 43 0 2 1238 1289 35 0 0 chr15 85656744 85656889 -17838085 - B1_Mus2 SINE Alu -1 146 2 2 1238 621 188 113 0 chr15 85658174 85658307 -17836667 - URR1A DNA MER1_type -2 224 77 2 1238 720 269 55 20 chr15 85658394 85658595 -17836379 + B4A SINE B4 67 274 -18 2 1238 1035 280 94 45 chr15 85658607 85658851 -17836123 + RMER5 LTR ERV1 58 322 -212 2 1238 1863 114 157 64 chr15 85658851 85659048 -17835926 + RMER17C LTR ERVK 1 178 -232 2 1238 656 64 11 0 chr15 85659048 85659142 -17835832 + (TC)n Simple_repeat Simple_repeat 1 95 0 2 1238 1863 114 157 64 chr15 85659142 85659319 -17835655 + RMER17C LTR ERVK 179 410 0 2 1238 1035 280 94 45 chr15 85659319 85659519 -17835455 + RMER5 LTR ERV1 323 524 -10 2 1238 247 319 21 11 chr15 85659619 85659714 -17835260 + MLT1A0 LTR MaLR 204 299 -66 2 1238 470 135 0 22 chr15 85660720 85660811 -17834163 + C-rich Low_complexity Low_complexity 3 91 0 2 1238 1102 64 42 21 chr15 85661364 85661507 -17833467 - B1_Mus2 SINE Alu 0 147 2 2 1238 306 253 73 62 chr15 85661526 85661655 -17833319 - L1MB5 LINE L1 -117 6057 5922 2 1238 219 139 0 0 chr15 85661655 85661691 -17833283 + (ATG)n Simple_repeat Simple_repeat 3 38 0 2 1238 306 253 73 62 chr15 85661691 85661738 -17833236 - L1MB5 LINE L1 -253 5921 5879 2 1238 1086 50 57 0 chr15 85661751 85661891 -17833083 - B1_Mus1 SINE Alu 0 148 1 2 1238 340 331 59 59 chr15 85662131 85662266 -17832708 + ID_B1 SINE B4 82 216 -8 2 1238 207 206 0 60 chr15 85662549 85662616 -17832358 + C-rich Low_complexity Low_complexity 5 67 0 2 1238 241 266 156 10 chr15 85664008 85664125 -17830849 - MIRm SINE MIR -106 170 37 2 1238 1388 75 37 0 chr15 85664147 85664335 -17830639 + B2_Mm2 SINE B2 1 195 0 2 1238 449 191 95 0 chr15 85664412 85664496 -17830478 - PB1D7 SINE Alu -28 92 1 2 1238 211 156 267 0 chr15 85664767 85664812 -17830162 + ID4 SINE ID 17 73 -10 2 1238 192 213 177 16 chr15 85664850 85664912 -17830062 + L2b LINE L2 3227 3298 -77 2 1238 1125 176 27 14 chr15 85665188 85665407 -17829567 - URR1B DNA MER1_type -2 223 2 2 1238 423 302 70 60 chr15 85666876 85667205 -17827769 - ORR1E LTR MaLR -1 378 26 3 1238 1241 237 39 25 chr15 85667479 85667765 -17827209 + B4A SINE B4 2 291 -1 3 1238 972 242 5 27 chr15 85667798 85668019 -17826955 - B3 SINE B2 0 216 1 3 1238 471 35 0 0 chr15 85668100 85668157 -17826817 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1238 840 155 0 23 chr15 85668291 85668423 -17826551 - B1_Mur3 SINE Alu -16 133 5 3 1238 669 257 104 33 chr15 85668769 85669039 -17825935 - B4A SINE B4 -3 289 1 3 1238 434 288 8 8 chr15 85669588 85669707 -17825267 - PB1D7 SINE Alu -1 119 1 3 1238 624 305 38 67 chr15 85669907 85670018 -17824956 - MLT2D LTR ERVL -161 253 142 3 1238 3176 138 126 70 chr15 85670018 85670734 -17824240 - RMER6A LTR ERVK 0 756 1 3 1238 624 305 38 67 chr15 85670734 85670861 -17824113 - MLT2D LTR ERVL -273 141 22 3 1238 1245 193 14 0 chr15 85671257 85671475 -17823499 + URR1B DNA MER1_type 1 221 -4 3 1238 319 41 0 39 chr15 85673123 85673174 -17821800 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 3 1238 348 24 0 0 chr15 85674420 85674461 -17820513 + (TC)n Simple_repeat Simple_repeat 1 41 0 3 1238 1348 63 23 6 chr15 85674461 85674636 -17820338 - B2_Mm2 SINE B2 -15 180 3 3 1238 206 302 0 16 chr15 85676158 85676222 -17818752 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1238 701 275 98 125 chr15 85676287 85676582 -17818392 - B4 SINE B4 -4 288 2 3 1238 437 262 119 0 chr15 85676599 85676725 -17818249 - ID_B1 SINE B4 -82 142 2 3 1238 2406 140 8 10 chr15 85676937 85677333 -17817641 - MTC LTR MaLR 0 421 27 3 1238 1341 257 34 9 chr15 85677418 85677744 -17817230 - ORR1D2 LTR MaLR -2 368 35 3 1238 932 70 8 0 chr15 85678371 85678500 -17816474 + (TTCTC)n Simple_repeat Simple_repeat 2 131 0 3 1238 932 136 0 0 chr15 85678500 85678632 -17816342 - B1_Mus1 SINE Alu -15 133 2 3 1238 1524 171 29 22 chr15 85678689 85678964 -17816010 - Lx5 LINE L1 0 7050 6774 3 1238 798 176 227 0 chr15 85679063 85679239 -17815735 + B3 SINE B2 1 216 0 3 1238 1230 41 0 7 chr15 85679242 85679390 -17815584 + B1_Mus2 SINE Alu 1 147 0 3 1238 1115 83 6 0 chr15 85679421 85679577 -17815397 + B2_Mm1a SINE B2 2 158 -35 3 1238 459 0 0 0 chr15 85679577 85679628 -17815346 + (TAAA)n Simple_repeat Simple_repeat 4 54 0 3 1238 1225 125 11 0 chr15 85679649 85679825 -17815149 + B2_Mm1t SINE B2 2 179 -14 3 1238 366 90 28 2 chr15 85679876 85679984 -17814990 + B2_Mm2 SINE B2 47 193 -2 3 1238 661 229 7 34 chr15 85679989 85680138 -17814836 + B1_Mur2 SINE Alu 1 145 -4 3 1238 296 261 208 42 chr15 85680153 85680273 -17814701 - RSINE1 SINE B4 -12 153 14 3 1238 210 191 0 0 chr15 85680283 85680325 -17814649 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1238 1023 155 111 25 chr15 85680341 85680540 -17814434 - B3 SINE B2 0 216 1 3 1238 1142 81 0 13 chr15 85680589 85680739 -17814235 + B1_Mus1 SINE Alu 1 148 0 3 1238 389 263 52 17 chr15 85680750 85680866 -17814108 + B1F SINE Alu 8 127 -22 3 1238 259 250 78 0 chr15 85680877 85680941 -17814033 + ID4 SINE ID 2 70 -13 3 1238 235 254 34 0 chr15 85680889 85680948 -17814026 + tRNA-Ala-GCG tRNA tRNA 12 72 -3 3 1238 1101 194 97 0 chr15 85680975 85681171 -17813803 + B3 SINE B2 1 215 -1 3 1238 210 143 0 0 chr15 85681171 85681206 -17813768 + (TGG)n Simple_repeat Simple_repeat 1 35 0 3 1238 226 291 38 0 chr15 85681216 85681295 -17813679 - L1MB3 LINE L1 -74 6109 6028 3 1238 244 269 0 0 chr15 85681625 85681677 -17813297 + (CGTG)n Simple_repeat Simple_repeat 4 55 0 3 1238 653 160 95 20 chr15 85682567 85682714 -17812260 - B2_Mm2 SINE B2 -27 168 11 3 1238 1252 41 0 0 chr15 85682729 85682875 -17812099 + B1_Mm SINE Alu 2 147 0 3 1238 202 38 189 0 chr15 85682875 85682928 -17812046 + (CAAAC)n Simple_repeat Simple_repeat 3 65 0 3 1238 196 266 61 30 chr15 85683668 85683734 -17811240 + MIRb SINE MIR 120 187 -81 3 1238 238 248 127 48 chr15 85683787 85683890 -17811084 - MIRb SINE MIR -47 221 109 3 1238 670 114 48 0 chr15 85684677 85684782 -17810192 - B1_Mus1 SINE Alu -9 139 30 3 1238 187 246 15 30 chr15 85684902 85684969 -17810005 + L2 LINE L2 3016 3081 -338 3 1238 977 136 0 0 chr15 85685524 85685664 -17809310 + B1_Mus1 SINE Alu 4 143 -5 3 1238 322 269 27 27 chr15 85686243 85686354 -17808620 + MLT1A1 LTR MaLR 298 408 0 3 1238 1707 135 6 84 chr15 85687729 85688061 -17806913 - ORR1A4 LTR MaLR 0 329 24 3 1238 863 90 0 36 chr15 85688028 85688166 -17806808 + B1_Mm SINE Alu 15 147 0 3 1238 249 140 0 0 chr15 85688166 85688223 -17806751 + (A)n Simple_repeat Simple_repeat 1 57 0 3 1238 331 148 148 0 chr15 85688229 85688290 -17806684 - ORR1A4 LTR MaLR -324 70 1 3 1238 748 220 82 33 chr15 85689056 85689239 -17805735 + B3A SINE B2 5 196 -2 3 1238 228 295 89 59 chr15 85690566 85690667 -17804307 - RMER15 LTR ERVL -44 531 428 3 1238 233 345 40 29 chr15 85690749 85690922 -17804052 - Lx8 LINE L1 -308 7165 6991 3 1238 432 176 147 0 chr15 85690952 85691054 -17803920 - B1F1 SINE Alu -2 147 31 3 1238 531 125 59 163 chr15 85691083 85691236 -17803738 + B1_Mur4 SINE Alu 7 143 -7 3 1238 381 43 0 0 chr15 85691267 85691314 -17803660 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1238 293 232 14 14 chr15 85691341 85691411 -17803563 - RSINE1 SINE B4 -80 85 16 3 1238 401 284 129 92 chr15 85691444 85691747 -17803227 - Lx8 LINE L1 -530 6943 6630 3 1238 254 87 22 0 chr15 85691859 85691905 -17803069 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 3 1238 274 266 26 11 chr15 85693841 85693947 -17801027 + Lx7 LINE L1 5681 5790 -1906 3 1238 636 203 56 35 chr15 85694159 85694302 -17800672 - B1_Mur2 SINE Alu -1 148 3 3 1238 740 275 59 26 chr15 85694806 85695002 -17799972 + B4 SINE B4 4 219 -73 3 1238 616 162 137 0 chr15 85695002 85695119 -17799855 + B1_Mur1 SINE Alu 9 141 -8 3 1238 740 275 59 26 chr15 85695119 85695165 -17799809 + B4 SINE B4 220 271 -21 3 1238 2971 149 26 57 chr15 85695610 85696205 -17798769 - RMER13B LTR ERVK 0 908 333 3 1238 1623 146 142 25 chr15 85696205 85696571 -17798403 - RLTR9E LTR ERVK 0 409 1 3 1238 1856 119 62 6 chr15 85696571 85696892 -17798082 - RMER13B LTR ERVK -569 339 1 3 1238 717 191 35 14 chr15 85696959 85697102 -17797872 - B1_Mus1 SINE Alu -1 147 2 3 1238 240 312 125 0 chr15 85697102 85697198 -17797776 + MER2 DNA MER2_type 196 303 -42 3 1238 2007 93 79 19 chr15 85697263 85697580 -17797394 - Lx LINE L1 -4 6650 6315 3 1238 1011 239 29 0 chr15 85697609 85697814 -17797160 - B3 SINE B2 -5 211 1 3 1238 432 0 0 0 chr15 85699006 85699054 -17795920 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1238 648 175 94 7 chr15 85700128 85700266 -17794708 - MTC LTR MaLR 0 421 272 3 1238 323 202 110 77 chr15 85700269 85700360 -17794614 - MTC LTR MaLR -245 176 68 3 1238 1190 138 178 9 chr15 85700747 85701049 -17793925 - MTC LTR MaLR -8 413 67 3 1238 194 0 0 37 chr15 85701722 85701749 -17793225 + (TTTTTG)n Simple_repeat Simple_repeat 4 29 0 3 1238 1151 95 0 0 chr15 85701756 85701903 -17793071 - B1_Mus1 SINE Alu 0 148 2 3 1238 363 235 88 0 chr15 85702464 85702566 -17792408 + MTC LTR MaLR 309 419 -2 3 1238 640 273 110 32 chr15 85703117 85703363 -17791611 - MLT1A0 LTR MaLR -99 266 2 3 1238 1393 102 5 0 chr15 85703499 85703685 -17791289 - B2_Mm1t SINE B2 -5 188 2 3 1238 616 93 26 26 chr15 85704437 85704591 -17790383 + (TG)n Simple_repeat Simple_repeat 2 155 0 3 1238 306 143 36 36 chr15 85704624 85704791 -17790183 + (TG)n Simple_repeat Simple_repeat 2 168 0 3 1238 22 35 0 0 chr15 85706951 85706980 -17787994 + AT_rich Low_complexity Low_complexity 1 29 0 3 1238 1275 210 179 11 chr15 85708388 85708735 -17786239 - MTD LTR MaLR -14 405 1 3 1238 659 12 12 0 chr15 85708887 85708967 -17786007 + (TC)n Simple_repeat Simple_repeat 2 82 0 3 1238 1709 245 42 22 chr15 85710733 85711142 -17783832 + MTD LTR MaLR 3 419 0 3 1238 1550 58 16 0 chr15 85711653 85711841 -17783133 - B2_Mm2 SINE B2 -4 191 1 3 1238 272 253 43 54 chr15 85712126 85712150 -17782824 - ID_B1 SINE B4 -127 97 7 3 1238 299 279 0 0 chr15 85712150 85712218 -17782756 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 3 1238 1097 204 59 5 chr15 85712363 85712565 -17782409 - B3 SINE B2 -2 214 2 3 1238 458 308 0 9 chr15 85712598 85712703 -17782271 - PB1D10 SINE Alu -13 104 1 3 1238 1176 204 116 4 chr15 85713636 85713912 -17781062 + MTC LTR MaLR 101 407 -14 3 1238 372 303 110 13 chr15 85714416 85714570 -17780404 + MIR SINE MIR 57 225 -37 3 1238 347 185 181 58 chr15 85714582 85714670 -17780304 - ORR1D2 LTR MaLR 0 370 263 3 1238 1352 87 22 5 chr15 85714670 85714855 -17780119 + B2_Mm2 SINE B2 1 188 -7 3 1238 347 192 211 55 chr15 85714855 85714980 -17779994 - ORR1D2 LTR MaLR -108 262 54 3 1238 2023 104 49 6 chr15 85714984 85715341 -17779633 - ORR1A2 LTR MaLR -8 386 3 3 1238 1263 27 0 13 chr15 85715782 85715931 -17779043 + B1_Mus1 SINE Alu 2 148 0 3 1238 500 294 29 0 chr15 85716163 85716299 -17778675 + B1F1 SINE Alu 9 148 -1 3 1238 246 136 0 0 chr15 85716313 85716357 -17778617 + (CAGG)n Simple_repeat Simple_repeat 2 45 0 3 1238 29 0 0 0 chr15 85716540 85716569 -17778405 + AT_rich Low_complexity Low_complexity 1 29 0 3 1238 2927 193 173 78 chr15 85717113 85717421 -17777553 + RMER12 LTR ERVK 1 334 -988 3 1238 1481 68 21 0 chr15 85717421 85717612 -17777362 + B2_Mm2 SINE B2 1 195 0 3 1238 2927 193 173 78 chr15 85717612 85717652 -17777322 + RMER12 LTR ERVK 335 335 -987 3 1238 711 0 0 0 chr15 85717652 85717731 -17777243 + (GA)n Simple_repeat Simple_repeat 2 80 0 3 1238 1310 63 86 0 chr15 85717738 85717912 -17777062 + B2_Mm1t SINE B2 1 189 -4 3 1238 2927 193 173 78 chr15 85717912 85718271 -17776703 + RMER12 LTR ERVK 335 739 -583 3 1238 1432 75 11 5 chr15 85718271 85718460 -17776514 + B2_Mm2 SINE B2 2 191 -4 4 1238 2927 193 173 78 chr15 85718460 85718538 -17776436 + RMER12 LTR ERVK 740 844 -478 3 1238 407 100 14 0 chr15 85718538 85718608 -17776366 + (TATG)n Simple_repeat Simple_repeat 2 72 0 4 1238 2927 193 173 78 chr15 85718608 85718773 -17776201 + RMER12 LTR ERVK 845 1052 -270 3 1238 262 269 48 40 chr15 85718822 85718946 -17776028 + RLTR22_Mur LTR ERVK 1687 1811 -37 4 1238 1136 65 147 0 chr15 85719173 85719343 -17775631 - B2_Mm2 SINE B2 0 195 1 4 1238 208 53 26 26 chr15 85719535 85719574 -17775400 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1238 1080 63 220 0 chr15 85719600 85719759 -17775215 + B2_Mm2 SINE B2 2 195 0 4 1238 700 223 259 0 chr15 85719761 85719981 -17774993 - MTD LTR MaLR -38 381 105 4 1238 435 237 254 0 chr15 85719981 85720095 -17774879 + B1_Mur2 SINE Alu 1 143 -6 4 1238 564 230 41 92 chr15 85720162 85720203 -17774771 - B2_Mm2 SINE B2 -9 186 144 4 1238 1247 34 0 13 chr15 85720203 85720352 -17774622 - B1_Mus2 SINE Alu 0 147 1 4 1238 742 158 39 41 chr15 85720352 85720506 -17774468 - B3 SINE B2 -52 143 1 4 1239 369 255 94 0 chr15 85722068 85722174 -17772800 + B4 SINE B4 160 275 -17 4 1239 207 0 0 0 chr15 85724527 85724550 -17770424 + (GGCTG)n Simple_repeat Simple_repeat 4 26 0 4 1239 195 69 0 0 chr15 85730277 85730306 -17764668 + (G)n Simple_repeat Simple_repeat 1 29 0 4 1239 1117 57 14 0 chr15 85734662 85734803 -17760171 + B1_Mus1 SINE Alu 1 143 -5 4 1239 869 40 8 23 chr15 85734810 85734939 -17760035 + (GGA)n Simple_repeat Simple_repeat 3 129 0 4 1239 195 42 0 0 chr15 85736041 85736065 -17758909 + (TGGGGG)n Simple_repeat Simple_repeat 1 24 0 4 1239 842 190 0 0 chr15 85737240 85737377 -17757597 + B1_Mus2 SINE Alu 2 138 -9 4 1239 1011 162 0 8 chr15 85737393 85737630 -17757344 + GA-rich Low_complexity Low_complexity 1 235 0 4 1239 244 64 21 21 chr15 85738520 85738568 -17756406 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 4 1239 1207 100 50 0 chr15 85738607 85738787 -17756187 - B2_Mm1t SINE B2 -4 189 1 4 1239 950 164 37 21 chr15 85738789 85738976 -17755998 - B2_Mm2 SINE B2 -5 190 1 4 1239 180 0 0 0 chr15 85740296 85740316 -17754658 + (GGA)n Simple_repeat Simple_repeat 1 20 0 4 1239 1162 132 22 6 chr15 85742161 85742344 -17752630 + B2_Mm2 SINE B2 1 186 -9 4 1239 237 33 0 0 chr15 85743226 85743256 -17751718 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1239 998 117 0 7 chr15 85743389 85743527 -17751447 + B1_Mus1 SINE Alu 2 138 -10 4 1239 342 0 0 0 chr15 85743539 85743577 -17751397 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 1239 315 0 0 0 chr15 85743577 85743611 -17751363 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1239 390 311 59 32 chr15 85743611 85743797 -17751177 + ID_B1 SINE B4 17 207 -17 4 1239 410 0 0 20 chr15 85744023 85744074 -17750900 + (TTTTC)n Simple_repeat Simple_repeat 1 50 0 4 1239 491 45 15 0 chr15 85744077 85744143 -17750831 + (TC)n Simple_repeat Simple_repeat 2 68 0 4 1239 723 235 102 5 chr15 85744145 85744342 -17750632 - B3 SINE B2 0 216 1 4 1239 480 278 89 14 chr15 85744446 85744592 -17750382 - RSINE1 SINE B4 -1 164 8 4 1239 1240 114 11 0 chr15 85745304 85745480 -17749494 + B2_Mm1t SINE B2 2 179 -14 4 1239 370 67 30 3 chr15 85745532 85745633 -17749341 + B2_Mm2 SINE B2 48 187 -8 4 1239 1035 211 80 130 chr15 85745896 85746272 -17748702 + MTE2a LTR MaLR 3 359 -20 4 1239 399 217 109 0 chr15 85747443 85747535 -17747439 + PB1D9 SINE Alu 12 113 -7 4 1239 1924 201 37 17 chr15 85748382 85748787 -17746187 + MTC LTR MaLR 1 413 -8 4 1239 514 200 105 0 chr15 85748848 85748953 -17746021 - PB1D7 SINE Alu -4 116 1 4 1239 574 215 194 29 chr15 85748997 85749136 -17745838 - RSINE1 SINE B4 0 165 4 4 1239 326 192 23 0 chr15 85750071 85750146 -17744828 + MIRc SINE MIR 70 152 -124 4 1239 264 59 0 0 chr15 85751352 85751386 -17743588 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1239 447 294 15 27 chr15 85753650 85754050 -17740924 + (CATA)n Simple_repeat Simple_repeat 1 394 0 4 1239 317 109 18 0 chr15 85754079 85754134 -17740840 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1239 409 215 7 16 chr15 85755155 85755261 -17739713 + B1_Mus2 SINE Alu 1 103 -44 4 1239 198 0 0 0 chr15 85756012 85756034 -17738940 + (CAGA)n Simple_repeat Simple_repeat 3 24 0 4 1239 244 241 90 45 chr15 85756283 85756383 -17738591 + MIR SINE MIR 63 173 -95 4 1239 1083 128 0 0 chr15 85756849 85756997 -17737977 + B1_Mur3 SINE Alu 2 149 0 4 1239 468 0 0 0 chr15 85756997 85757049 -17737925 + (GGGA)n Simple_repeat Simple_repeat 4 55 0 4 1239 1018 222 0 48 chr15 85758015 85758223 -17736751 - B3 SINE B2 -16 200 3 4 1239 750 149 49 7 chr15 85759419 85759561 -17735413 - B1_Mur4 SINE Alu -1 149 2 4 1239 234 62 0 0 chr15 85759586 85759618 -17735356 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1239 479 289 0 82 chr15 85760779 85760926 -17734048 - B1F SINE Alu -11 138 4 4 1239 302 255 78 39 chr15 85763047 85763069 -17731905 + L1MDa LINE L1 2403 2429 -4204 4 1239 560 241 13 54 chr15 85763069 85763218 -17731756 + B1F2 SINE Alu 1 143 -6 4 1239 302 255 78 39 chr15 85763218 85763297 -17731677 + L1MDa LINE L1 2430 2507 -4126 4 1239 248 288 17 0 chr15 85763302 85763361 -17731613 + ID4_ SINE ID 3 62 -21 4 1239 384 22 0 0 chr15 85763364 85763409 -17731565 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1239 563 204 46 0 chr15 85763530 85763638 -17731336 + B1_Mur1 SINE Alu 2 114 -35 4 1239 234 0 0 0 chr15 85763641 85763667 -17731307 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 4 1239 226 291 0 0 chr15 85763673 85763752 -17731222 + A-rich Low_complexity Low_complexity 1 79 0 4 1239 228 273 114 80 chr15 85763764 85763939 -17731035 + B2_Mm1a SINE B2 2 182 -11 4 1239 387 230 37 90 chr15 85764307 85764441 -17730533 + MT2B LTR ERVL 131 257 -344 4 1239 711 168 23 0 chr15 85764351 85764482 -17730492 + B1_Mus2 SINE Alu 12 145 -2 4 1239 300 341 87 0 chr15 85764483 85764609 -17730365 + L1MDa LINE L1 2639 2775 -3762 4 1239 465 34 0 0 chr15 85764764 85764823 -17730151 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1239 735 275 61 9 chr15 85764823 85765027 -17729947 - ID_B1 SINE B4 -8 216 1 4 1239 418 286 9 9 chr15 85765092 85765205 -17729769 + L1MDa LINE L1 3055 3167 -3370 4 1239 191 338 37 24 chr15 85765862 85765944 -17729030 + L4 LINE RTE 349 431 -1598 4 1239 180 322 45 11 chr15 85766415 85766503 -17728471 + MIR3 SINE MIR 112 202 -6 4 1239 183 300 0 0 chr15 85766817 85766947 -17728027 + (CA)n Simple_repeat Simple_repeat 2 131 0 4 1239 271 352 0 0 chr15 85766969 85767074 -17727900 + (CA)n Simple_repeat Simple_repeat 2 106 0 4 1239 253 43 21 42 chr15 85767851 85767899 -17727075 + (CAAAAA)n Simple_repeat Simple_repeat 3 49 0 4 1239 708 237 32 122 chr15 85768789 85769019 -17725955 + MTE2a LTR MaLR 126 334 -45 4 1239 1060 142 43 11 chr15 85769019 85769204 -17725770 - B2_Mm2 SINE B2 -4 191 1 4 1239 708 237 32 122 chr15 85769204 85769252 -17725722 + MTE2a LTR MaLR 335 379 0 4 1239 341 310 0 33 chr15 85770619 85770739 -17724235 + PB1D10 SINE Alu 2 117 0 4 1239 1412 85 16 16 chr15 85770743 85770935 -17724039 + B2_Mm2 SINE B2 1 192 -3 4 1239 390 266 98 38 chr15 85771211 85771344 -17723630 - B1F SINE Alu -8 141 1 4 1239 599 195 203 26 chr15 85772396 85772549 -17722425 + B2_Mm2 SINE B2 2 181 -14 4 1239 402 243 117 0 chr15 85773178 85773289 -17721685 + PB1 SINE Alu 1 124 -3 4 1239 623 310 32 11 chr15 85773764 85773953 -17721021 + B4A SINE B4 15 207 -85 4 1239 245 51 26 0 chr15 85773953 85773992 -17720982 + (CAAAAA)n Simple_repeat Simple_repeat 4 43 0 4 1239 969 65 232 7 chr15 85774013 85774168 -17720806 + B2_Mm2 SINE B2 3 192 -3 4 1239 272 240 79 50 chr15 85774272 85774341 -17720633 - RMER12 LTR ERVK -477 845 774 4 1239 1817 116 123 15 chr15 85774341 85774665 -17720309 + ORR1B2 LTR MaLR 1 359 -8 4 1239 363 322 25 103 chr15 85775528 85775557 -17719417 + B4 SINE B4 69 149 -143 4 1239 712 199 0 29 chr15 85775557 85775697 -17719277 + B1_Mur2 SINE Alu 13 148 -1 4 1239 363 322 25 103 chr15 85775697 85775732 -17719242 + B4 SINE B4 150 256 -36 4 1239 318 178 41 0 chr15 85776469 85776542 -17718432 + ID4 SINE ID 8 83 0 4 1239 313 296 92 49 chr15 85776628 85776770 -17718204 + RSINE1 SINE B4 18 165 0 4 1239 533 256 267 0 chr15 85776818 85776994 -17717980 + ID_B1 SINE B4 1 223 -1 4 1239 243 0 0 0 chr15 85777011 85777038 -17717936 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 1239 1197 21 0 0 chr15 85777038 85777177 -17717797 + (GGGAGA)n Simple_repeat Simple_repeat 5 144 0 4 1239 923 104 0 111 chr15 85777336 85777349 -17717625 - B1_Mus2 SINE Alu -2 145 137 4 1239 270 0 0 0 chr15 85777349 85777379 -17717595 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 4 1239 923 104 0 111 chr15 85777379 85777527 -17717447 - B1_Mus2 SINE Alu -11 136 2 4 1239 278 312 0 0 chr15 85777986 85778079 -17716895 + (CA)n Simple_repeat Simple_repeat 2 94 0 4 1239 221 245 0 0 chr15 85779071 85779124 -17715850 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1239 266 0 0 29 chr15 85779696 85779731 -17715243 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1239 1217 41 7 0 chr15 85779734 85779879 -17715095 - B1_Mus2 SINE Alu 0 147 2 4 1239 23 0 0 0 chr15 85780657 85780680 -17714294 + AT_rich Low_complexity Low_complexity 1 23 0 4 1239 952 139 0 7 chr15 85780995 85781140 -17713834 + B1_Mur2 SINE Alu 5 148 -1 4 1239 739 206 130 16 chr15 85781693 85781885 -17713089 - B3 SINE B2 -2 214 1 4 1239 218 125 25 0 chr15 85781915 85781955 -17713019 + (TC)n Simple_repeat Simple_repeat 1 41 0 4 1239 1125 77 28 0 chr15 85782139 85782282 -17712692 + B1_Mus2 SINE Alu 1 147 0 4 1239 380 111 0 16 chr15 85782437 85782501 -17712473 + (GGA)n Simple_repeat Simple_repeat 1 63 0 4 1239 1277 71 53 0 chr15 85783261 85783431 -17711543 + B2_Mm1t SINE B2 1 179 -14 4 1239 357 118 288 34 chr15 85783472 85783602 -17711372 + B2_Mm2 SINE B2 14 177 -18 5 1239 729 165 14 28 chr15 85783708 85783851 -17711123 + B1_Mur2 SINE Alu 7 147 -2 5 1239 395 119 15 0 chr15 85783852 85783919 -17711055 + (CA)n Simple_repeat Simple_repeat 2 69 0 5 1239 1454 60 38 0 chr15 85784354 85784537 -17710437 - B2_Mm2 SINE B2 -3 192 3 5 1239 1091 229 127 48 chr15 85785618 85785655 -17709319 + RMER4B LTR ERVK 17 48 -537 5 1239 1097 129 88 6 chr15 85785655 85785826 -17709148 + B2_Mm2 SINE B2 2 186 -9 5 1239 1091 229 106 47 chr15 85785826 85786287 -17708687 + RMER4B LTR ERVK 49 574 -11 5 1239 1081 80 7 0 chr15 85787239 85787376 -17707598 - B1_Mus1 SINE Alu -10 138 1 5 1239 2539 80 3 3 chr15 85787771 85788095 -17706879 + ORR1A3 LTR MaLR 3 326 0 5 1239 232 27 54 0 chr15 85789260 85789297 -17705677 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1239 1048 210 19 5 chr15 85790005 85790211 -17704763 - B3 SINE B2 0 216 8 5 1239 414 0 0 0 chr15 85790388 85790434 -17704540 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1239 624 312 52 35 chr15 85790806 85791092 -17703882 + B4A SINE B4 1 291 -1 5 1239 392 246 23 0 chr15 85791116 85791291 -17703683 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 1239 892 262 22 26 chr15 85792831 85793062 -17701912 - B4A SINE B4 -62 230 1 5 1239 1400 205 109 32 chr15 85793827 85794165 -17700809 - MTD LTR MaLR -55 364 1 5 1239 204 40 0 0 chr15 85795669 85795694 -17699280 + (CTGGGG)n Simple_repeat Simple_repeat 6 30 0 5 1239 351 355 86 0 chr15 85797199 85797351 -17697623 - HAL1-3A_ME LINE L1 -718 2140 1976 5 1239 584 223 38 93 chr15 85797360 85797543 -17697431 - B3A SINE B2 -16 182 10 5 1239 371 302 47 0 chr15 85799076 85799248 -17695726 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 5 1239 279 79 0 0 chr15 85800283 85800321 -17694653 + (TCCC)n Simple_repeat Simple_repeat 2 39 0 5 1239 333 0 0 0 chr15 85800658 85800695 -17694279 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 1239 1148 103 151 53 chr15 85801156 85801362 -17693612 + URR1A DNA MER1_type 1 226 0 5 1239 218 32 32 0 chr15 85801373 85801404 -17693570 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 5 1239 1242 54 0 0 chr15 85801404 85801551 -17693423 - B1_Mus2 SINE Alu 0 147 1 5 1239 335 348 70 7 chr15 85801580 85801722 -17693252 - RSINE1 SINE B4 -12 153 3 5 1239 286 326 10 0 chr15 85801749 85801847 -17693127 + GA-rich Low_complexity Low_complexity 1 99 0 5 1239 333 0 0 0 chr15 85802527 85802564 -17692410 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 1239 351 0 0 0 chr15 85803122 85803161 -17691813 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1239 555 224 8 8 chr15 85803608 85803725 -17691249 + PB1D10 SINE Alu 1 117 0 5 1239 219 69 0 0 chr15 85805271 85805300 -17689674 + (GGGAGA)n Simple_repeat Simple_repeat 5 33 0 5 1239 926 118 7 7 chr15 85805667 85805812 -17689162 - B1_Mur4 SINE Alu 0 150 6 5 1239 554 268 8 8 chr15 85805850 85805978 -17688996 - RSINE1 SINE B4 -32 133 6 5 1239 180 257 0 0 chr15 85806973 85807008 -17687966 + L2b LINE L2 3327 3361 -14 5 1239 1357 104 15 15 chr15 85807287 85807468 -17687506 + B2_Mm2 SINE B2 1 184 -11 5 1239 291 28 0 0 chr15 85807468 85807504 -17687470 + (TTAA)n Simple_repeat Simple_repeat 3 38 0 5 1239 1357 104 15 15 chr15 85807504 85807517 -17687457 + B2_Mm2 SINE B2 185 195 0 5 1239 330 273 0 0 chr15 85808610 85808687 -17686287 + PB1D7 SINE Alu 44 120 0 5 1239 2831 283 38 23 chr15 85810349 85811144 -17683830 + MTE-int LTR MaLR 772 1578 -2 5 1239 785 179 22 0 chr15 85811153 85811287 -17683687 - B1_Mur4 SINE Alu -12 138 2 5 1239 773 259 119 0 chr15 85811321 85811514 -17683460 + B3 SINE B2 1 216 0 5 1239 1519 60 16 0 chr15 85811599 85811784 -17683190 - B2_Mm2 SINE B2 -7 188 1 5 1239 369 0 0 0 chr15 85813045 85813086 -17681888 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1239 419 324 95 30 chr15 85813165 85813461 -17681513 - L1MC3 LINE L1 -7 7778 7464 5 1239 323 218 49 49 chr15 85814301 85814383 -17680591 + PB1D7 SINE Alu 13 94 -26 5 1239 387 0 0 0 chr15 85815889 85815932 -17679042 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 5 1239 1112 72 0 7 chr15 85815932 85816071 -17678903 - B1_Mus1 SINE Alu -10 138 1 5 1239 668 126 168 0 chr15 85817694 85817813 -17677161 + URR1A DNA MER1_type 6 144 -82 5 1239 1277 81 34 17 chr15 85817813 85817988 -17676986 + B2_Mm1t SINE B2 2 179 -14 5 1239 315 125 319 18 chr15 85818035 85818148 -17676826 + B2_Mm2 SINE B2 47 193 -2 5 1239 530 179 8 39 chr15 85818109 85818237 -17676737 + URR1A DNA MER1_type 102 225 -1 5 1239 253 344 76 27 chr15 85818317 85818502 -17676472 + L1MB4 LINE L1 5943 6136 -44 5 1239 499 262 8 39 chr15 85818508 85818635 -17676339 + RSINE1 SINE B4 4 126 -39 5 1239 513 0 0 0 chr15 85818663 85818720 -17676254 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 1239 886 78 148 0 chr15 85818893 85819021 -17675953 + B1_Mm SINE Alu 1 147 0 5 1239 874 253 185 16 chr15 85819086 85819335 -17675639 + B4A SINE B4 2 292 0 5 1239 264 268 0 0 chr15 85819335 85819417 -17675557 + (CATA)n Simple_repeat Simple_repeat 4 85 0 5 1239 238 260 39 13 chr15 85819641 85819719 -17675255 + L1M4 LINE L1 5586 5665 -509 5 1239 1480 49 27 0 chr15 85820141 85820324 -17674650 + B2_Mm2 SINE B2 2 189 -6 5 1239 951 183 144 5 chr15 85820357 85820544 -17674430 - B3 SINE B2 -1 215 3 5 1239 532 281 21 7 chr15 85820546 85820686 -17674288 - ID_B1 SINE B4 -2 222 81 5 1239 1169 83 0 12 chr15 85820898 85821069 -17673905 - B2_Mm2 SINE B2 -25 170 2 5 1239 426 53 0 0 chr15 85822228 85822285 -17672689 + (TCCCC)n Simple_repeat Simple_repeat 2 58 0 5 1239 884 178 0 7 chr15 85822947 85823094 -17671880 + B1_Mur4 SINE Alu 2 147 -3 5 1239 183 80 0 0 chr15 85824227 85824252 -17670722 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1239 192 299 59 15 chr15 85825784 85825852 -17669122 - MIRm SINE MIR 0 276 206 5 1239 803 220 102 79 chr15 85827364 85827630 -17667344 - MTD LTR MaLR -146 273 2 5 1239 214 147 0 0 chr15 85827815 85827849 -17667125 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1239 508 338 14 37 chr15 85828508 85828726 -17666248 - MER20 DNA MER1_type -4 215 3 5 1239 303 297 130 45 chr15 85828734 85829087 -17665887 + Lx7 LINE L1 5691 6073 -1623 5 1239 22 35 0 0 chr15 85829219 85829248 -17665726 + AT_rich Low_complexity Low_complexity 1 29 0 5 1239 25 0 0 0 chr15 85829771 85829796 -17665178 + AT_rich Low_complexity Low_complexity 1 25 0 5 1239 214 236 65 65 chr15 85829983 85830060 -17664914 + ID4_ SINE ID 2 78 -5 5 1239 1176 241 121 58 chr15 85830077 85830456 -17664518 - MTD LTR MaLR -14 405 3 5 1239 714 168 204 31 chr15 85830468 85830659 -17664315 - URR1B DNA MER1_type -1 224 1 5 1239 484 268 133 10 chr15 85831970 85832166 -17662808 - MTD LTR MaLR -1 418 199 5 1239 471 202 43 0 chr15 85832186 85832280 -17662694 - B1_Mur2 SINE Alu -1 148 51 5 1239 695 238 34 110 chr15 85832494 85832590 -17662384 + B4 SINE B4 2 219 -73 5 1239 858 171 0 0 chr15 85832590 85832730 -17662244 + B1_Mus1 SINE Alu 2 141 -7 5 1239 339 143 62 16 chr15 85832751 85832815 -17662159 - B3A SINE B2 -51 147 81 5 1239 302 258 0 0 chr15 85834328 85834390 -17660584 + PB1D10 SINE Alu 7 68 -49 5 1239 718 79 0 0 chr15 85834386 85834487 -17660487 + URR1B DNA MER1_type 125 225 0 5 1239 246 200 79 13 chr15 85834504 85834580 -17660394 - MLT1D LTR MaLR -344 161 81 5 1239 198 0 0 0 chr15 85834582 85834604 -17660370 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1239 180 0 0 0 chr15 85835418 85835438 -17659536 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1239 1161 75 0 7 chr15 85835438 85835575 -17659399 + B1_Mus1 SINE Alu 1 137 -11 5 1239 279 0 0 0 chr15 85835575 85835606 -17659368 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1239 204 188 0 0 chr15 85835774 85835806 -17659168 + C-rich Low_complexity Low_complexity 5 36 0 5 1239 227 31 31 0 chr15 85835959 85835991 -17658983 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 1239 397 138 12 12 chr15 85836919 85837000 -17657974 + (TTTA)n Simple_repeat Simple_repeat 1 81 0 5 1239 600 170 20 0 chr15 85837000 85837100 -17657874 - RSINE1 SINE B4 -9 156 55 5 1239 894 152 20 27 chr15 85837162 85837311 -17657663 - B1_Mur1 SINE Alu -1 148 1 5 1239 220 65 21 42 chr15 85837314 85837362 -17657612 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 5 1239 392 241 0 15 chr15 85837375 85837509 -17657465 - B3 SINE B2 -2 214 1 5 1239 370 211 196 38 chr15 85838408 85838541 -17656433 - B3A SINE B2 -43 155 2 5 1239 1182 179 46 0 chr15 85838750 85838945 -17656029 + B3 SINE B2 1 204 -12 5 1239 1203 68 0 7 chr15 85838945 85839093 -17655881 + B1_Mus1 SINE Alu 1 148 0 5 1239 232 181 54 27 chr15 85839093 85839167 -17655807 + A-rich Low_complexity Low_complexity 6 81 0 5 1239 1649 245 86 12 chr15 85839268 85839689 -17655285 + Lx6 LINE L1 7005 7456 -4 5 1239 1281 20 0 13 chr15 85839831 85839980 -17654994 + B1_Mus2 SINE Alu 1 147 0 5 1239 381 22 0 0 chr15 85840751 85840797 -17654177 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1239 335 303 11 11 chr15 85840823 85840913 -17654061 - RSINE1 SINE B4 -30 135 46 5 1239 180 0 0 0 chr15 85844376 85844396 -17650578 + (CCCCCA)n Simple_repeat Simple_repeat 1 20 0 5 1239 521 103 35 0 chr15 85844948 85845035 -17649939 + B3 SINE B2 127 216 0 6 1239 3139 44 28 8 chr15 85845680 85846068 -17648906 + MTA_Mm LTR MaLR 1 396 0 6 1239 1441 93 5 5 chr15 85847623 85847818 -17647156 + B2_Mm2 SINE B2 1 195 0 6 1239 1075 187 15 10 chr15 85847820 85848025 -17646949 + ID_B1 SINE B4 11 216 -8 6 1239 393 22 0 0 chr15 85848281 85848327 -17646647 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1239 1048 197 109 0 chr15 85849363 85849556 -17645418 + B3 SINE B2 2 215 -1 6 1239 21 0 0 0 chr15 85849556 85849577 -17645397 + AT_rich Low_complexity Low_complexity 1 21 0 6 1239 978 237 19 14 chr15 85849614 85849828 -17645146 + B3 SINE B2 1 215 -1 6 1239 243 0 0 0 chr15 85850231 85850258 -17644716 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1239 686 258 45 0 chr15 85851387 85851565 -17643409 - B3A SINE B2 -11 187 2 6 1240 339 250 38 0 chr15 85852168 85852248 -17642726 + B1F SINE Alu 45 127 -22 6 1240 531 292 6 78 chr15 85852335 85852502 -17642472 + RSINE1 SINE B4 11 165 0 6 1240 198 0 0 0 chr15 85852946 85852968 -17642006 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 6 1240 217 162 14 14 chr15 85853144 85853213 -17641761 + (CA)n Simple_repeat Simple_repeat 1 69 0 6 1240 324 309 0 0 chr15 85854687 85854768 -17640206 + (TG)n Simple_repeat Simple_repeat 1 81 0 6 1240 297 0 0 0 chr15 85856009 85856042 -17638932 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1240 806 158 0 121 chr15 85856948 85857114 -17637860 + B1_Mus2 SINE Alu 1 146 -1 6 1240 849 123 28 28 chr15 85857147 85857289 -17637685 + B1_Mm SINE Alu 3 144 -3 6 1240 282 116 0 0 chr15 85857289 85857332 -17637642 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 6 1240 791 224 0 42 chr15 85857872 85858040 -17636934 + RSINE1 SINE B4 2 162 -3 6 1240 214 169 0 78 chr15 85858357 85858421 -17636553 + C-rich Low_complexity Low_complexity 2 60 0 6 1240 43 88 0 0 chr15 85864268 85864381 -17630593 + GC_rich Low_complexity Low_complexity 1 113 0 6 1240 26 0 0 0 chr15 85864552 85864578 -17630396 + GC_rich Low_complexity Low_complexity 1 26 0 6 1240 221 135 19 37 chr15 85864643 85864697 -17630277 + C-rich Low_complexity Low_complexity 4 56 0 6 1240 1112 102 102 6 chr15 85865787 85865964 -17629010 + B2_Mm2 SINE B2 1 194 -1 6 1240 420 20 0 0 chr15 85866388 85866437 -17628537 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1240 292 251 0 67 chr15 85866883 85866978 -17627996 + ID4 SINE ID 10 96 -56 6 1240 327 154 39 0 chr15 85866984 85867062 -17627912 + Lx5 LINE L1 6966 7046 -4 6 1240 1069 96 101 18 chr15 85867073 85867242 -17627732 + B2_Mm1t SINE B2 2 184 -9 6 1240 1683 16 0 0 chr15 85867249 85867433 -17627541 + B2_Mm1a SINE B2 1 184 -9 6 1240 1662 36 0 0 chr15 85867569 85867761 -17627213 - B2_Mm1a SINE B2 0 193 2 6 1240 1043 129 0 0 chr15 85867797 85867944 -17627030 + B1_Mus1 SINE Alu 2 148 0 6 1240 186 133 0 0 chr15 85867944 85867974 -17627000 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 6 1240 1141 85 84 12 chr15 85867975 85868142 -17626832 - B2_Mm2 SINE B2 -14 181 3 6 1240 23 54 0 0 chr15 85870539 85870576 -17624398 + AT_rich Low_complexity Low_complexity 1 37 0 6 1240 242 213 10 31 chr15 85870625 85870722 -17624252 + CT-rich Low_complexity Low_complexity 4 98 0 6 1240 310 237 0 0 chr15 85870747 85870806 -17624168 - PB1D10 SINE Alu -35 82 24 6 1240 252 0 0 0 chr15 85871281 85871309 -17623665 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1240 219 69 0 0 chr15 85871354 85871383 -17623591 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 6 1240 568 89 0 0 chr15 85872523 85872602 -17622372 + B2_Mm2 SINE B2 1 79 -116 6 1240 503 303 55 130 chr15 85872613 85872958 -17622016 - MLT1D LTR MaLR -69 436 118 6 1240 325 344 94 43 chr15 85874401 85874635 -17620339 + L1MEd LINE L1 450 695 -5424 6 1240 674 282 48 5 chr15 85874648 85874837 -17620137 + B3 SINE B2 4 200 -16 6 1240 333 0 0 0 chr15 85874837 85874874 -17620100 + (GAAAA)n Simple_repeat Simple_repeat 4 40 0 6 1240 900 74 0 0 chr15 85874874 85874994 -17619980 + (GGAAA)n Simple_repeat Simple_repeat 3 123 0 6 1240 564 207 81 88 chr15 85874994 85875142 -17619832 + B1_Mur2 SINE Alu 2 148 -1 6 1240 659 208 144 43 chr15 85875215 85875398 -17619576 - B3 SINE B2 -6 210 27 6 1240 642 224 38 4 chr15 85875408 85875565 -17619409 - B3 SINE B2 -22 171 1 6 1240 217 300 45 91 chr15 85875916 85875969 -17619005 + B3 SINE B2 99 146 -70 6 1240 644 45 0 11 chr15 85875969 85876058 -17618916 + (CA)n Simple_repeat Simple_repeat 1 88 0 6 1240 217 300 45 91 chr15 85876058 85876114 -17618860 + B3 SINE B2 147 203 -13 6 1240 423 56 0 0 chr15 85876115 85876169 -17618805 + (GA)n Simple_repeat Simple_repeat 2 55 0 6 1240 332 195 0 26 chr15 85876180 85876333 -17618641 + (CA)n Simple_repeat Simple_repeat 2 150 0 6 1240 405 58 0 0 chr15 85876332 85876384 -17618590 + (GA)n Simple_repeat Simple_repeat 2 53 0 6 1240 1804 275 45 98 chr15 85876506 85877399 -17617575 - Lx7 LINE L1 -1497 6199 5288 6 1240 992 106 35 0 chr15 85877399 85877540 -17617434 - B1_Mur4 SINE Alu 0 150 5 6 1240 1804 259 41 139 chr15 85877540 85877928 -17617046 - Lx7 LINE L1 -560 5287 4975 6 1240 1800 129 44 99 chr15 85877928 85878198 -17616776 + ORR1A3 LTR MaLR 3 285 -41 6 1240 1170 54 0 39 chr15 85878198 85878351 -17616623 + B1_Mm SINE Alu 1 147 0 6 1240 1800 129 44 99 chr15 85878351 85878423 -17616551 + ORR1A3 LTR MaLR 286 326 0 6 1240 1804 259 41 139 chr15 85878423 85878454 -17616520 - Lx7 LINE L1 -873 4974 4950 6 1240 1849 141 27 36 chr15 85878454 85878553 -17616421 + ORR1A4 LTR MaLR 1 95 -234 6 1240 879 118 0 0 chr15 85878553 85878688 -17616286 + (TA)n Simple_repeat Simple_repeat 1 135 0 6 1240 1849 141 27 36 chr15 85878688 85878920 -17616054 + ORR1A4 LTR MaLR 96 329 0 6 1240 1804 259 41 139 chr15 85878920 85879019 -17615955 - Lx7 LINE L1 -898 4949 4852 6 1240 1314 92 33 0 chr15 85879742 85879926 -17615048 + B2_Mm1t SINE B2 1 190 -3 6 1240 223 171 0 0 chr15 85880199 85880240 -17614734 + B3A SINE B2 5 45 -153 6 1240 4045 167 28 11 chr15 85880263 85880984 -17613990 - RMER1A Other Other 0 1030 298 6 1240 1057 185 11 0 chr15 85880984 85881173 -17613801 + B3 SINE B2 26 216 0 6 1240 621 259 64 89 chr15 85881217 85881420 -17613554 + B3A SINE B2 1 198 0 6 1240 413 319 26 37 chr15 85881721 85881910 -17613064 - MER3 DNA MER1_type -22 187 1 6 1240 1001 254 60 80 chr15 85882741 85883191 -17611783 - RMER4A LTR ERVK -9 457 17 6 1240 191 323 31 20 chr15 85884206 85884304 -17610670 - MIRm SINE MIR -127 149 51 6 1240 1029 111 152 40 chr15 85885241 85885439 -17609535 + URR1A DNA MER1_type 7 226 0 6 1240 902 49 25 0 chr15 85885568 85885690 -17609284 + (TCTCC)n Simple_repeat Simple_repeat 3 127 0 6 1240 428 302 24 112 chr15 85886050 85886126 -17608848 - MLT1B LTR MaLR -162 228 174 6 1240 975 122 0 28 chr15 85886126 85886269 -17608705 + B1_Mus1 SINE Alu 1 139 -9 6 1240 428 302 24 112 chr15 85886269 85886442 -17608532 - MLT1B LTR MaLR -217 173 1 6 1240 187 196 37 56 chr15 85886679 85886733 -17608241 - L2b LINE L2 -4 3371 3319 6 1240 1736 173 54 11 chr15 85887112 85887463 -17607511 - ORR1D1 LTR MaLR -8 366 1 6 1240 28 48 0 0 chr15 85889317 85889359 -17605615 + GC_rich Low_complexity Low_complexity 1 42 0 6 1240 271 314 48 19 chr15 85892774 85892878 -17602096 - MIR SINE MIR -104 158 52 6 1240 462 278 111 9 chr15 85893393 85893618 -17601356 - L1MB8 LINE L1 0 6178 5931 6 1240 553 241 0 66 chr15 85893779 85893930 -17601044 - RSINE1 SINE B4 0 165 25 6 1240 624 270 79 41 chr15 85893930 85894220 -17600754 - L1MC3 LINE L1 -159 7626 7326 6 1240 308 314 78 28 chr15 85894255 85894396 -17600578 - L1MC3 LINE L1 -693 7092 6945 6 1240 1275 20 0 13 chr15 85894536 85894685 -17600289 + B1_Mus1 SINE Alu 1 147 -1 6 1240 514 349 103 18 chr15 85894698 85895028 -17599946 - L1MC3 LINE L1 -1054 6731 6374 6 1240 243 0 0 0 chr15 85896104 85896131 -17598843 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 1240 300 111 0 0 chr15 85896131 85896175 -17598799 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 1240 920 172 161 0 chr15 85896613 85896799 -17598175 + B3 SINE B2 1 216 0 6 1240 302 113 0 61 chr15 85896807 85896873 -17598101 + A-rich Low_complexity Low_complexity 1 62 0 6 1240 555 0 0 0 chr15 85896934 85897003 -17597971 - BC1_Mm scRNA scRNA -82 70 2 6 1240 255 125 0 0 chr15 85897074 85897114 -17597860 + (CAAT)n Simple_repeat Simple_repeat 2 41 0 6 1240 257 252 65 37 chr15 85897836 85897943 -17597031 + Tigger15a DNA TcMar 501 610 -105 6 1240 223 325 0 0 chr15 85897954 85898031 -17596943 + G-rich Low_complexity Low_complexity 6 82 0 6 1240 414 0 0 0 chr15 85898214 85898260 -17596714 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1240 186 375 57 0 chr15 85899119 85899207 -17595767 + MIRc SINE MIR 64 156 -112 6 1240 967 135 0 57 chr15 85901906 85902063 -17592911 + B1_Mur3 SINE Alu 2 149 0 6 1240 567 43 0 0 chr15 85902074 85902144 -17592830 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 6 1240 773 291 37 33 chr15 85902154 85902424 -17592550 + B4A SINE B4 1 271 -21 6 1240 432 0 0 0 chr15 85903227 85903275 -17591699 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 1240 565 215 42 0 chr15 85903748 85903892 -17591082 + RMER15 LTR ERVL 422 571 -4 6 1240 225 88 0 0 chr15 85905494 85905516 -17589458 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1240 1217 74 0 0 chr15 85905516 85905664 -17589310 + B1_Mus1 SINE Alu 1 148 0 6 1240 225 88 0 0 chr15 85905664 85905675 -17589299 + (A)n Simple_repeat Simple_repeat 1 11 0 6 1240 1264 65 71 12 chr15 85905675 85905845 -17589129 - B2_Mm2 SINE B2 -14 181 2 6 1240 258 83 0 0 chr15 85908683 85908719 -17586255 - U2 snRNA snRNA -152 36 1 6 1240 397 322 0 65 chr15 85909544 85909697 -17585277 - Charlie1b DNA MER1_type -74 449 307 6 1240 333 140 0 0 chr15 85909957 85910014 -17584960 + (CA)n Simple_repeat Simple_repeat 1 57 0 6 1240 418 310 30 55 chr15 85910809 85910846 -17584128 + ID_B1 SINE B4 59 218 -6 7 1240 628 228 8 0 chr15 85910846 85910973 -17584001 + B1F SINE Alu 16 143 -6 7 1240 189 0 0 0 chr15 85910981 85911002 -17583972 + (A)n Simple_repeat Simple_repeat 1 21 0 7 1240 879 151 14 14 chr15 85911350 85911498 -17583476 - B1_Mur4 SINE Alu -2 148 1 7 1240 475 298 119 46 chr15 85911873 85912133 -17582841 - RMER15 LTR ERVL -22 553 275 7 1240 930 203 61 5 chr15 85914812 85915025 -17579949 - ORR1D1 LTR MaLR 0 374 150 7 1240 795 80 127 8 chr15 85915058 85915184 -17579790 - B1_Mur2 SINE Alu 0 149 9 7 1240 290 238 0 0 chr15 85915190 85915253 -17579721 - ORR1D1 LTR MaLR -217 157 95 7 1240 420 20 0 0 chr15 85915499 85915548 -17579426 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1240 560 306 20 25 chr15 85915706 85915904 -17579070 - RMER15 LTR ERVL -15 560 364 7 1240 502 244 22 21 chr15 85915956 85916100 -17578874 - B3 SINE B2 -1 215 55 7 1240 351 65 0 0 chr15 85917701 85917747 -17577227 + (TA)n Simple_repeat Simple_repeat 1 46 0 7 1240 510 17 0 0 chr15 85918703 85918762 -17576212 + (TTCC)n Simple_repeat Simple_repeat 2 60 0 7 1240 799 290 55 45 chr15 85918794 85919083 -17575891 - B4A SINE B4 0 292 1 7 1240 361 300 80 72 chr15 85919433 85919590 -17575384 - L1MC LINE L1 -2913 3233 3075 7 1240 765 245 48 24 chr15 85919590 85919799 -17575175 - B3 SINE B2 0 216 3 7 1240 361 300 80 72 chr15 85919799 85919878 -17575096 - L1MC LINE L1 -3072 3074 2995 7 1240 225 269 0 0 chr15 85920098 85920150 -17574824 + CT-rich Low_complexity Low_complexity 3 54 0 7 1240 962 204 80 0 chr15 85920161 85920362 -17574612 - ID_B1 SINE B4 0 224 8 7 1240 262 267 0 39 chr15 85920294 85920372 -17574602 - BC1_Mm scRNA scRNA -77 75 1 7 1240 366 299 0 0 chr15 85923167 85923341 -17571633 + (CA)n Simple_repeat Simple_repeat 1 174 0 7 1240 377 155 0 0 chr15 85923350 85923408 -17571566 + HAL1-3A_ME LINE L1 1974 2031 -827 7 1240 4912 105 13 44 chr15 85923614 85924110 -17570864 - RMER6A LTR ERVK 0 756 278 7 1240 960 75 37 22 chr15 85924110 85924240 -17570734 + B1_Mus1 SINE Alu 5 138 -10 7 1240 369 0 0 0 chr15 85924240 85924281 -17570693 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 7 1240 4912 105 13 44 chr15 85924286 85924569 -17570405 - RMER6A LTR ERVK -479 277 1 7 1240 313 182 48 83 chr15 85926004 85926088 -17568886 + PB1D9 SINE Alu 2 82 -38 7 1240 729 110 7 14 chr15 85926089 85926227 -17568747 + (TCTA)n Simple_repeat Simple_repeat 3 139 0 7 1240 266 246 0 14 chr15 85926253 85926327 -17568647 - L1MB7 LINE L1 -238 5946 5874 7 1240 408 309 45 51 chr15 85926354 85926531 -17568443 + ID_B1 SINE B4 2 177 -47 7 1240 247 313 95 12 chr15 85926457 85926541 -17568433 + B1F SINE Alu 19 109 -40 7 1240 1732 26 0 0 chr15 85927274 85927467 -17567507 + B2_Mm1a SINE B2 1 193 0 7 1240 5062 38 3 2 chr15 85927705 85928291 -17566683 - LTRIS_Mus LTR ERV1 0 587 1 7 1240 226 0 0 56 chr15 85928839 85928875 -17566099 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 1240 424 284 64 0 chr15 85930388 85930497 -17564477 + PB1D10 SINE Alu 2 117 0 7 1240 238 211 19 0 chr15 85930555 85930607 -17564367 + (TG)n Simple_repeat Simple_repeat 1 53 0 7 1240 732 345 18 21 chr15 85930613 85930897 -17564077 - B4A SINE B4 -2 290 8 7 1240 947 146 0 7 chr15 85932496 85932634 -17562340 - B1_Mus1 SINE Alu -7 141 5 7 1240 293 263 31 110 chr15 85933623 85933799 -17561175 - L1MC5 LINE L1 -1185 6857 6696 7 1240 232 290 61 61 chr15 85933958 85933972 -17561002 + ID SINE ID 62 75 -149 7 1240 350 205 24 66 chr15 85933972 85934099 -17560875 + PB1D7 SINE Alu 1 115 -2 7 1240 395 202 186 29 chr15 85934102 85934204 -17560770 + PB1D9 SINE Alu 3 120 0 7 1240 303 202 30 0 chr15 85934626 85934725 -17560249 + (TCCA)n Simple_repeat Simple_repeat 1 102 0 7 1240 309 322 17 8 chr15 85934728 85934847 -17560127 + (CCCA)n Simple_repeat Simple_repeat 1 120 0 7 1240 333 302 93 57 chr15 85934848 85935041 -17559933 - L1MC4 LINE L1 -116 7926 7727 7 1240 243 286 0 87 chr15 85935389 85935481 -17559493 + BC1_Mm scRNA scRNA 6 89 -63 7 1240 341 307 26 0 chr15 85935505 85935619 -17559355 + PB1 SINE Alu 8 124 -3 7 1240 537 183 0 0 chr15 85936200 85936304 -17558670 + (CATA)n Simple_repeat Simple_repeat 3 106 0 7 1240 213 299 15 15 chr15 85937843 85937911 -17557063 + ID4_ SINE ID 8 75 -8 7 1240 226 67 44 0 chr15 85939151 85939196 -17555778 + (TTTG)n Simple_repeat Simple_repeat 3 49 0 7 1240 925 54 8 0 chr15 85939196 85939325 -17555649 - B1_Mus1 SINE Alu 0 148 19 7 1240 939 185 17 28 chr15 85939323 85939501 -17555473 - B3 SINE B2 -15 201 26 7 1240 477 110 0 0 chr15 85939589 85939662 -17555312 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 7 1240 183 302 41 20 chr15 85940904 85941002 -17553972 + MIRm SINE MIR 66 165 -111 7 1240 635 289 136 59 chr15 85941892 85942296 -17552678 + MLT1D LTR MaLR 3 437 -68 7 1240 509 83 11 18 chr15 85942297 85942398 -17552576 - B1_Mus2 SINE Alu -9 140 42 7 1240 288 181 81 46 chr15 85942328 85942415 -17552559 - RLTR25B LTR ERVK -511 517 428 7 1240 298 136 0 17 chr15 85942487 85942547 -17552427 - B1_Mus1 SINE Alu -89 59 1 7 1240 2171 63 0 0 chr15 85942547 85942833 -17552141 - ORR1A2 LTR MaLR -41 286 1 7 1240 1179 49 21 0 chr15 85944296 85944439 -17550535 + B1_Mm SINE Alu 2 147 0 7 1240 2317 127 109 13 chr15 85944493 85944877 -17550097 + MTC LTR MaLR 1 421 0 7 1240 904 215 23 11 chr15 85944892 85945066 -17549908 - B3A SINE B2 -18 180 5 7 1240 492 98 0 47 chr15 85945412 85945498 -17549476 + L1_Mus1 LINE L1 6486 6567 0 7 1240 1198 55 7 0 chr15 85945506 85945652 -17549322 + B1_Mm SINE Alu 1 147 0 7 1240 1359 91 27 0 chr15 85945712 85945898 -17549076 + B2_Mm2 SINE B2 3 193 -2 7 1240 180 0 0 0 chr15 85947977 85947997 -17546977 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1240 322 258 82 45 chr15 85949028 85949162 -17545812 - MLT1A0 LTR MaLR -4 361 223 7 1240 2601 103 2 15 chr15 85951493 85951895 -17543079 - MTB_Mm LTR MaLR 0 407 11 7 1240 29 0 0 0 chr15 85953500 85953529 -17541445 + AT_rich Low_complexity Low_complexity 1 29 0 7 1240 1197 75 0 0 chr15 85953529 85953676 -17541298 - B1_Mus1 SINE Alu 0 148 2 7 1240 1216 198 9 9 chr15 85953702 85953916 -17541058 - B3 SINE B2 0 216 3 7 1240 350 226 132 38 chr15 85954347 85954453 -17540521 - PB1D10 SINE Alu 0 117 2 7 1240 253 260 151 24 chr15 85954470 85954596 -17540378 + Cheshire DNA MER1_type 74 215 -2205 7 1240 417 39 0 0 chr15 85956233 85956284 -17538690 + (TC)n Simple_repeat Simple_repeat 1 51 0 7 1240 490 234 6 31 chr15 85956337 85956697 -17538277 + G-rich Low_complexity Low_complexity 1 350 0 7 1240 1250 155 26 52 chr15 85956861 85957092 -17537882 - URR1B DNA MER1_type 0 225 1 7 1240 278 297 0 0 chr15 85959506 85959570 -17535404 - URR1B DNA MER1_type -157 68 5 7 1240 316 259 50 41 chr15 85964492 85964522 -17530452 - BC1_Mm scRNA scRNA -29 123 92 7 1240 219 69 0 0 chr15 85964522 85964551 -17530423 + (TTG)n Simple_repeat Simple_repeat 2 30 0 7 1240 316 259 50 41 chr15 85964551 85964641 -17530333 - BC1_Mm scRNA scRNA -61 91 2 7 1240 27 0 0 0 chr15 85968009 85968036 -17526938 + AT_rich Low_complexity Low_complexity 1 27 0 7 1240 1081 86 6 6 chr15 85968742 85968906 -17526068 + (TCCA)n Simple_repeat Simple_repeat 4 167 0 7 1240 203 128 83 21 chr15 85972699 85972747 -17522227 + G-rich Low_complexity Low_complexity 3 53 0 7 1240 627 232 44 25 chr15 85973539 85973698 -17521276 + B3A SINE B2 1 162 -36 7 1240 3480 102 107 11 chr15 85973698 85974231 -17520743 - RLTR31A_Mm LTR ERVK 0 584 1 7 1240 414 0 0 0 chr15 85974234 85974280 -17520694 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1240 1454 71 0 16 chr15 85974317 85974504 -17520470 + B2_Mm2 SINE B2 2 185 -10 7 1240 862 218 68 39 chr15 85974570 85974775 -17520199 - B3 SINE B2 -1 215 5 7 1240 411 368 46 19 chr15 85975361 85975577 -17519397 + MER58B DNA MER1_type 1 222 -119 7 1240 435 157 0 0 chr15 85976066 85976155 -17518819 + (CA)n Simple_repeat Simple_repeat 2 90 0 7 1240 1034 197 59 0 chr15 85976917 85977120 -17517854 + B3 SINE B2 1 215 -1 7 1240 211 308 64 0 chr15 85978971 85979049 -17515925 + MER5A DNA MER1_type 107 189 0 7 1240 202 273 130 0 chr15 85979064 85979141 -17515833 + MIRm SINE MIR 97 183 -93 7 1240 862 216 5 16 chr15 85980014 85980207 -17514767 + 7SK RNA RNA 2 192 -139 7 1240 207 0 0 0 chr15 85980226 85980249 -17514725 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 7 1240 2123 145 40 22 chr15 85980396 85980799 -17514175 + RMER17C LTR ERVK 1 410 0 7 1240 536 218 45 0 chr15 85980901 85981011 -17513963 + B1_Mur1 SINE Alu 35 149 0 7 1240 250 178 0 0 chr15 85981014 85981059 -17513915 + A-rich Low_complexity Low_complexity 1 45 0 7 1240 1131 211 0 4 chr15 85981379 85981607 -17513367 + RMER1B Other Other 693 919 -147 7 1240 221 57 0 28 chr15 85981610 85981646 -17513328 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1240 326 111 63 0 chr15 85981661 85981724 -17513250 + RMER1B Other Other 989 1055 -11 7 1240 651 225 186 6 chr15 85981744 85981927 -17513047 + B3 SINE B2 1 216 0 7 1240 758 186 0 8 chr15 85982196 85982326 -17512648 + B1_Mur4 SINE Alu 1 129 -21 7 1240 897 113 44 6 chr15 85982609 85982769 -17512205 - B2_Mm2 SINE B2 -23 172 7 7 1240 1298 230 125 27 chr15 85982801 85982948 -17512026 + MTD LTR MaLR 13 165 -254 7 1240 3312 89 53 39 chr15 85982948 85983175 -17511799 + MURVY-LTR LTR ERV1 1 241 -278 8 1240 213 39 0 0 chr15 85983175 85983201 -17511773 + (CCCCCA)n Simple_repeat Simple_repeat 5 30 0 8 19 3312 89 53 39 chr15 85983201 85983485 -17511489 + MURVY-LTR LTR ERV1 242 519 0 8 1241 1298 230 125 27 chr15 85983485 85983704 -17511270 + MTD LTR MaLR 166 415 -4 7 1241 180 0 0 0 chr15 85983786 85983806 -17511168 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 8 1241 225 286 62 52 chr15 85984503 85984599 -17510375 - MTEb LTR MaLR -282 97 1 8 1241 795 100 8 0 chr15 85984651 85984771 -17510203 - B1_Mus2 SINE Alu 0 147 27 8 1241 780 146 260 12 chr15 85984924 85985097 -17509877 - B3 SINE B2 0 216 1 8 1241 212 59 29 0 chr15 85985112 85985146 -17509828 + (CAA)n Simple_repeat Simple_repeat 2 36 0 8 1241 307 224 212 0 chr15 85985151 85985236 -17509738 - ID_B1 SINE B4 -18 206 104 8 1241 1198 36 0 0 chr15 85985750 85985888 -17509086 - B1_Mus2 SINE Alu -9 138 1 8 1241 922 200 52 33 chr15 85986018 85986230 -17508744 + B3 SINE B2 1 216 0 8 1241 344 224 53 0 chr15 85986243 85986319 -17508655 + ID4_ SINE ID 2 81 -2 8 1241 629 172 33 0 chr15 85986387 85986509 -17508465 - B2_Mm2 SINE B2 -46 149 24 8 1241 574 224 54 31 chr15 85986502 85986631 -17508343 + MTD LTR MaLR 18 149 -270 8 1241 550 199 52 96 chr15 85987314 85987564 -17507410 + RMER17C LTR ERVK 15 253 -157 8 1241 606 93 0 0 chr15 85987566 85987652 -17507322 + (TCCCC)n Simple_repeat Simple_repeat 4 89 0 8 1241 274 25 24 24 chr15 85987655 85987696 -17507278 + (TC)n Simple_repeat Simple_repeat 1 41 0 8 1241 800 210 77 34 chr15 85987734 85987941 -17507033 - B3 SINE B2 0 216 1 8 1241 186 43 0 0 chr15 85988008 85988031 -17506943 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 1241 1629 37 0 5 chr15 85988199 85988389 -17506585 - B2_Mm1a SINE B2 -4 189 1 8 1241 399 41 0 0 chr15 85988595 85988644 -17506330 + (TTA)n Simple_repeat Simple_repeat 2 50 0 8 1241 304 258 10 58 chr15 85988644 85988736 -17506238 - PB1D7 SINE Alu -9 111 23 8 1241 207 0 0 0 chr15 85988956 85988979 -17505995 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 1241 258 32 0 0 chr15 85989008 85989039 -17505935 + (TA)n Simple_repeat Simple_repeat 1 31 0 8 1241 268 200 144 0 chr15 85989081 85989171 -17505803 - Lx5 LINE L1 -4 7046 6944 8 1241 924 133 183 96 chr15 85989227 85989435 -17505539 + URR1A DNA MER1_type 1 226 0 8 1241 446 97 0 27 chr15 85990724 85990798 -17504176 + (GGAA)n Simple_repeat Simple_repeat 2 73 0 8 1241 267 268 25 107 chr15 85990801 85990960 -17504014 + MT2B2 LTR ERVL 131 276 -308 8 1241 705 245 0 0 chr15 85990846 85990985 -17503989 + ID_B1 SINE B4 85 223 -1 8 1241 390 244 58 0 chr15 85991074 85991160 -17503814 + B4A SINE B4 2 92 -200 8 1241 1042 109 0 7 chr15 85991165 85991313 -17503661 + B1_Mur4 SINE Alu 2 148 -2 8 1241 279 79 0 0 chr15 85991324 85991362 -17503612 + (GGAAA)n Simple_repeat Simple_repeat 3 40 0 8 1241 243 358 42 18 chr15 85991427 85991592 -17503382 + L1M4 LINE L1 3612 3780 -2366 8 1241 231 36 0 0 chr15 85991960 85991988 -17502986 + (CAAG)n Simple_repeat Simple_repeat 1 28 0 8 1241 371 274 51 42 chr15 85991998 85992116 -17502858 + PB1D7 SINE Alu 2 120 0 8 1241 766 176 33 0 chr15 85992318 85992471 -17502503 + B3A SINE B2 3 160 -38 8 1241 1285 69 75 0 chr15 85992491 85992665 -17502309 + B2_Mm2 SINE B2 2 188 -7 8 1241 232 289 171 0 chr15 85992680 85992756 -17502218 + B3 SINE B2 122 210 -6 8 1241 285 141 0 0 chr15 85992880 85992929 -17502045 + (T)n Simple_repeat Simple_repeat 1 49 0 8 1241 1071 71 43 0 chr15 85992929 85993069 -17501905 - B1_Mm SINE Alu -1 146 1 8 1241 285 141 0 0 chr15 85993069 85993083 -17501891 + (T)n Simple_repeat Simple_repeat 1 14 0 8 1241 811 255 48 39 chr15 85993094 85993302 -17501672 + B4 SINE B4 83 292 0 8 1241 481 230 41 48 chr15 85993443 85993458 -17501516 + ID_B1 SINE B4 78 222 -2 8 1241 848 85 38 8 chr15 85993458 85993589 -17501385 + B1_Mur3 SINE Alu 14 148 -1 8 1241 388 224 39 77 chr15 85993860 85993926 -17501048 + MT2B LTR ERVL 146 287 -314 8 1241 557 91 0 0 chr15 85993926 85994003 -17500971 + B1_Mus2 SINE Alu 1 77 -70 8 1241 284 179 0 29 chr15 85994072 85994141 -17500833 + CT-rich Low_complexity Low_complexity 3 69 0 8 1241 395 231 96 0 chr15 85994300 85994404 -17500570 - PB1D9 SINE Alu 0 120 7 8 1241 217 276 35 0 chr15 85994357 85994415 -17500559 - B4A SINE B4 -152 140 81 8 1241 462 289 0 23 chr15 85994526 85994657 -17500317 - RSINE1 SINE B4 -35 130 3 8 1241 884 173 0 0 chr15 85994690 85994829 -17500145 + B1_Mur4 SINE Alu 5 143 -7 8 1241 22 0 0 0 chr15 85994829 85994851 -17500123 + AT_rich Low_complexity Low_complexity 1 22 0 8 1241 262 287 31 21 chr15 85995910 85996006 -17498968 + RMER15 LTR ERVL 409 505 -70 8 1241 335 333 10 0 chr15 85996526 85996628 -17498346 + RSINE1 SINE B4 46 148 -17 8 1241 213 121 0 0 chr15 85996654 85996687 -17498287 + (T)n Simple_repeat Simple_repeat 1 33 0 8 1241 846 120 60 54 chr15 85997084 85997112 -17497862 + URR1A DNA MER1_type 59 93 -133 8 1241 186 71 0 0 chr15 85997112 85997140 -17497834 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 8 1241 1215 55 0 0 chr15 85997140 85997286 -17497688 - B1_Mus1 SINE Alu -2 146 1 8 1241 846 120 60 54 chr15 85997286 85997423 -17497551 + URR1A DNA MER1_type 94 225 -1 8 1241 411 264 44 35 chr15 85997462 85997576 -17497398 - PB1D10 SINE Alu 0 117 3 8 1241 587 281 12 189 chr15 86001332 86001590 -17493384 + B4A SINE B4 1 207 -85 1 1241 1005 182 125 0 chr15 86001590 86001782 -17493192 + B3 SINE B2 1 216 0 2 1241 587 281 12 189 chr15 86001782 86001866 -17493108 + B4A SINE B4 208 282 -10 1 1241 493 134 72 0 chr15 86002384 86002481 -17492493 + B1_Mur4 SINE Alu 46 149 -1 3 1241 540 45 0 0 chr15 86002890 86002957 -17492017 + (TC)n Simple_repeat Simple_repeat 2 68 0 4 1241 339 25 0 0 chr15 86002957 86002996 -17491978 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1241 382 278 39 16 chr15 86004209 86004337 -17490637 + L1MDa LINE L1 200 330 -6303 6 1241 312 287 238 6 chr15 86004471 86004639 -17490335 + L1MDa LINE L1 2692 2898 -3639 6 1241 261 0 0 0 chr15 86004959 86004988 -17489986 + (GA)n Simple_repeat Simple_repeat 2 30 0 7 1241 247 227 26 39 chr15 86005783 86005861 -17489113 + RMER15 LTR ERVL 406 482 -93 8 1241 479 305 136 5 chr15 86006265 86006456 -17488518 + MER58A DNA MER1_type 1 216 -8 9 1241 204 97 0 0 chr15 86007195 86007226 -17487748 + (G)n Simple_repeat Simple_repeat 1 31 0 1 1241 1136 95 0 0 chr15 86008807 86008954 -17486020 + B1_Mus2 SINE Alu 1 147 0 1 1241 189 26 25 50 chr15 86008957 86008997 -17485977 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1241 383 247 54 12 chr15 86009494 86009662 -17485312 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 1 1241 481 223 19 28 chr15 86009733 86009839 -17485135 - PB1D10 SINE Alu -12 105 1 1 1241 745 141 83 62 chr15 86010113 86010257 -17484717 - B1_Mus1 SINE Alu 0 148 2 1 1241 404 280 92 8 chr15 86010465 86010584 -17484390 + B1F SINE Alu 13 141 -8 1 1241 600 14 0 0 chr15 86010790 86010859 -17484115 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 1241 345 296 78 0 chr15 86011067 86011199 -17483775 + L1ME1 LINE L1 6019 6166 -13 1 1241 180 0 0 0 chr15 86011207 86011227 -17483747 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 1 1241 1291 83 0 37 chr15 86011356 86011391 -17483583 - B2_Mm2 SINE B2 -12 183 155 2 1241 183 100 0 0 chr15 86011391 86011421 -17483553 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1241 1291 83 0 37 chr15 86011421 86011572 -17483402 - B2_Mm2 SINE B2 -41 154 5 2 1241 630 169 85 11 chr15 86011575 86011742 -17483232 - B3A SINE B2 -15 180 2 2 1241 27 0 0 0 chr15 86011752 86011779 -17483195 + AT_rich Low_complexity Low_complexity 1 27 0 2 1241 1343 63 11 33 chr15 86012004 86012164 -17482810 + B2_Mm2 SINE B2 1 161 -34 2 1241 234 0 0 0 chr15 86012164 86012190 -17482784 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 2 1241 1343 63 11 33 chr15 86012190 86012209 -17482765 + B2_Mm2 SINE B2 162 176 -19 2 1241 1268 41 0 0 chr15 86013707 86013854 -17481120 + B1_Mm SINE Alu 1 147 0 2 1241 206 133 0 0 chr15 86013854 86013884 -17481090 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1241 432 0 0 0 chr15 86014407 86014455 -17480519 + (TAAA)n Simple_repeat Simple_repeat 3 50 0 2 1241 291 275 26 52 chr15 86014877 86014951 -17480023 + ID SINE ID 4 71 -153 2 1241 450 0 0 0 chr15 86014951 86015001 -17479973 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 1241 291 283 42 40 chr15 86015001 86015056 -17479918 + ID_B1 SINE B4 72 138 -154 2 1241 33 66 0 0 chr15 86016078 86016139 -17478835 + GC_rich Low_complexity Low_complexity 1 61 0 3 1241 353 22 0 21 chr15 86017658 86017705 -17477269 + (TTA)n Simple_repeat Simple_repeat 2 47 0 3 1241 798 165 63 0 chr15 86017705 86017832 -17477142 - B1_Mus2 SINE Alu -10 137 3 3 1241 326 284 68 17 chr15 86018018 86018136 -17476838 + MLT1B LTR MaLR 7 130 -260 3 1241 1286 34 0 0 chr15 86018264 86018410 -17476564 + B1_Mm SINE Alu 2 147 0 3 1241 342 324 100 56 chr15 86018418 86018598 -17476376 + MLT1B LTR MaLR 113 300 -90 3 1241 714 183 38 8 chr15 86020785 86020917 -17474057 + B1_Mur3 SINE Alu 1 136 -13 3 1241 565 222 61 67 chr15 86021890 86022054 -17472920 - RSINE1 SINE B4 0 165 3 3 1241 325 299 29 15 chr15 86022211 86022347 -17472627 - Charlie8 DNA MER1_type -2181 247 110 3 1241 315 0 0 0 chr15 86022686 86022721 -17472253 + (T)n Simple_repeat Simple_repeat 1 35 0 3 1241 1300 27 0 0 chr15 86022721 86022868 -17472106 - B1_Mm SINE Alu 0 147 1 4 1241 2610 93 159 89 chr15 86023091 86023576 -17471398 + MURVY-LTR LTR ERV1 1 519 0 4 1241 313 314 57 0 chr15 86023614 86023754 -17471220 - L1MB7 LINE L1 -127 6057 5910 4 1241 1008 181 50 0 chr15 86023872 86024071 -17470903 + URR1B DNA MER1_type 17 225 0 4 1241 736 226 0 0 chr15 86024138 86024271 -17470703 - B1F SINE Alu -16 133 1 4 1241 412 345 87 33 chr15 86024271 86024547 -17470427 - MLT1A1 LTR MaLR -37 371 81 4 1241 347 85 0 0 chr15 86024599 86024646 -17470328 - ORR1B1 LTR MaLR -8 386 340 4 1241 1490 60 33 0 chr15 86024695 86024879 -17470095 - B2_Mm1a SINE B2 -2 191 2 4 1241 332 23 0 0 chr15 86024879 86024922 -17470052 - B1_Mm SINE Alu -17 130 88 4 1241 1855 61 57 0 chr15 86024922 86025184 -17469790 + RLTR10A LTR ERVK 1 277 -134 4 1241 4111 34 21 6 chr15 86025201 86025728 -17469246 + LSU-rRNA_Hsa rRNA rRNA 1366 1900 -3135 5 1241 396 241 8 59 chr15 86025728 86025747 -17469227 - ID_B1 SINE B4 -31 193 82 5 1241 691 111 0 0 chr15 86025747 86025846 -17469128 - B1_Mm SINE Alu -48 99 1 5 1241 1064 82 0 0 chr15 86025847 86025994 -17468980 - ORR1B1 LTR MaLR -41 353 207 5 1241 1241 70 0 12 chr15 86025994 86026008 -17468966 - B2_Mm2 SINE B2 -23 172 159 5 1241 279 0 0 0 chr15 86026008 86026039 -17468935 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 5 1241 1241 70 0 12 chr15 86026039 86026197 -17468777 - B2_Mm2 SINE B2 -37 158 2 5 1241 1027 104 131 24 chr15 86026199 86026367 -17468607 - B2_Mm2 SINE B2 -7 188 3 5 1241 1159 58 0 0 chr15 86026405 86026542 -17468432 - B1_Mus1 SINE Alu -10 138 2 5 1241 1365 67 44 6 chr15 86026543 86026723 -17468251 - B2_Mm2 SINE B2 -7 188 2 5 1241 920 112 0 296 chr15 86026724 86026952 -17468022 - ORR1B1 LTR MaLR -186 208 1 5 1241 236 302 101 0 chr15 86026954 86027113 -17467861 - L1MB7 LINE L1 -322 5852 5678 4 1241 1997 233 41 43 chr15 86027281 86027814 -17467160 + RMER5 LTR ERV1 1 532 -2 5 1241 187 250 21 0 chr15 86028665 86028713 -17466261 + MIRb SINE MIR 51 99 -169 6 1241 288 263 198 25 chr15 86028740 86028861 -17466113 - MER20 DNA MER1_type -47 172 31 6 1241 282 266 8 117 chr15 86029198 86029326 -17465648 + MT2B LTR ERVL 144 257 -344 6 1241 813 157 7 7 chr15 86029230 86029371 -17465603 + B1_Mur4 SINE Alu 9 149 -1 6 1241 189 0 0 0 chr15 86029382 86029403 -17465571 + (GGAA)n Simple_repeat Simple_repeat 1 21 0 6 1241 399 41 0 0 chr15 86030551 86030600 -17464374 + (TCC)n Simple_repeat Simple_repeat 1 49 0 6 1241 594 276 34 13 chr15 86030785 86030993 -17463981 + B4 SINE B4 4 236 -56 6 1241 276 100 0 0 chr15 86030993 86031033 -17463941 + (GAAAA)n Simple_repeat Simple_repeat 5 44 0 6 1241 819 138 35 40 chr15 86031033 86031255 -17463719 + RMER17C LTR ERVK 1 382 -427 6 1241 450 0 0 0 chr15 86031363 86031413 -17463561 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1241 2119 119 5 84 chr15 86031776 86032180 -17462794 + RMER1B Other Other 695 1066 0 7 1241 203 286 146 48 chr15 86032500 86032603 -17462371 - MIRc SINE MIR -43 225 113 7 1241 656 161 17 17 chr15 86034140 86034260 -17460714 + PB1D9 SINE Alu 1 120 0 7 1241 2477 137 21 3 chr15 86035415 86035802 -17459172 + ORR1B1 LTR MaLR 1 394 0 7 1241 1093 174 87 0 chr15 86035802 86035998 -17458976 + B3 SINE B2 4 216 0 7 1241 597 323 72 15 chr15 86036450 86036645 -17458329 + B4A SINE B4 82 287 -5 7 1241 461 245 76 19 chr15 86036667 86036825 -17458149 - MER2 DNA MER2_type -94 251 85 7 1241 232 351 43 29 chr15 86037506 86037644 -17457330 - L1M5 LINE L1 -444 5680 5541 7 1241 201 74 0 0 chr15 86037670 86037697 -17457277 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 1241 756 172 37 0 chr15 86037739 86037873 -17457101 - B1_Mur2 SINE Alu -5 144 6 7 1241 586 292 31 58 chr15 86037873 86037963 -17457011 - ID_B1 SINE B4 -4 219 2 8 1241 339 200 141 0 chr15 86037985 86038070 -17456904 - PB1D10 SINE Alu -7 120 24 8 1241 1299 96 62 0 chr15 86038132 86038310 -17456664 - B2_Mm2 SINE B2 -6 189 1 8 1241 284 235 116 5 chr15 86038310 86038408 -17456566 - B1F2 SINE Alu 0 117 13 8 1241 251 296 14 0 chr15 86038350 86038421 -17456553 - ID_B1 SINE B4 -73 151 80 8 1241 1250 82 53 0 chr15 86038534 86038704 -17456270 - B2_Mm2 SINE B2 -15 180 2 8 1241 564 15 0 0 chr15 86038771 86038836 -17456138 + (CA)n Simple_repeat Simple_repeat 2 66 0 8 1241 180 0 0 0 chr15 86038856 86038876 -17456098 + (T)n Simple_repeat Simple_repeat 1 20 0 8 1241 1241 28 14 0 chr15 86038876 86039020 -17455954 - B1_Mus2 SINE Alu 0 147 2 8 1241 678 273 134 18 chr15 86039092 86039367 -17455607 - ORR1E LTR MaLR -38 341 8 8 1241 1188 238 212 52 chr15 86039557 86039982 -17454992 + Lx8 LINE L1 6549 7041 -432 9 1241 639 174 35 0 chr15 86041733 86041848 -17453126 - PB1D9 SINE Alu 0 120 2 9 1241 269 327 39 10 chr15 86041969 86042071 -17452903 - PB1D10 SINE Alu 0 117 13 9 1241 232 364 0 20 chr15 86041988 86042089 -17452885 - ID_B1 SINE B4 -48 176 78 9 1241 336 266 174 28 chr15 86042108 86042286 -17452688 + B4A SINE B4 2 205 -87 9 1241 432 0 0 0 chr15 86042944 86042992 -17451982 + (CA)n Simple_repeat Simple_repeat 2 49 0 9 1241 452 242 32 0 chr15 86042992 86043087 -17451887 - U6 snRNA snRNA -9 98 1 9 1241 1686 36 0 0 chr15 86043096 86043289 -17451685 - B2_Mm1t SINE B2 0 193 1 9 1241 297 258 248 0 chr15 86044105 86044303 -17450671 - Charlie5 DNA MER1_type -12 2612 2366 9 1241 311 291 71 19 chr15 86046272 86046296 -17448678 - B4A SINE B4 -46 246 222 9 1241 1242 100 0 0 chr15 86046296 86046476 -17448498 + (TCC)n Simple_repeat Simple_repeat 1 180 0 1 1241 311 291 71 19 chr15 86046476 86046496 -17448478 - B4A SINE B4 -71 221 87 9 1241 734 103 0 0 chr15 86046496 86046603 -17448371 - B1_Mus1 SINE Alu -40 108 2 1 1241 359 222 12 0 chr15 86046742 86046823 -17448151 - PB1D10 SINE Alu 0 117 36 1 1241 498 299 177 30 chr15 86046905 86047171 -17447803 + MLT1C LTR MaLR 65 369 -98 1 1241 297 0 0 0 chr15 86047671 86047704 -17447270 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1241 27 49 0 0 chr15 86048435 86048476 -17446498 + AT_rich Low_complexity Low_complexity 1 41 0 1 1241 2059 142 103 69 chr15 86048668 86048990 -17445984 - MTC LTR MaLR 0 421 82 1 1241 432 0 0 0 chr15 86048990 86049038 -17445936 + (TTCTC)n Simple_repeat Simple_repeat 2 49 0 1 1241 1274 124 27 0 chr15 86049043 86049228 -17445746 - B2_Mm2 SINE B2 -4 191 2 1 1241 2059 142 103 69 chr15 86049228 86049306 -17445668 - MTC LTR MaLR -340 81 1 1 1241 236 146 36 0 chr15 86049324 86049379 -17445595 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 1 1241 384 293 148 15 chr15 86049536 86049975 -17444999 - L2a LINE L2 -206 3220 2727 1 1241 363 316 232 54 chr15 86051102 86051535 -17443439 + MLT1E2 LTR MaLR 3 505 -122 1 1241 213 121 0 0 chr15 86052290 86052323 -17442651 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 1 1241 1178 259 69 62 chr15 86052323 86052756 -17442218 - RLTR1B LTR ERV1 -76 436 1 1 1241 2886 28 22 0 chr15 86052756 86053365 -17441609 - RLTR1B-int LTR ERV1 0 3299 2598 1 1241 4247 23 45 2 chr15 86053363 86053878 -17441096 - RLTR1B-int LTR ERV1 -1191 2108 1572 1 1241 1883 84 26 79 chr15 86053880 86054456 -17440518 - RLTR1B-int LTR ERV1 -3161 537 1 1 1241 1037 114 24 0 chr15 86054456 86054622 -17440352 - RLTR1B LTR ERV1 0 512 343 1 1241 375 42 0 0 chr15 86054626 86054674 -17440300 - RLTR1B LTR ERV1 -102 410 363 1 1241 1143 98 217 0 chr15 86056160 86056344 -17438630 - URR1A DNA MER1_type -1 225 2 1 1241 713 211 8 0 chr15 86057145 86057273 -17437701 - B1_Mur3 SINE Alu -9 140 12 1 1241 876 105 0 0 chr15 86057278 86057421 -17437553 + (TTCC)n Simple_repeat Simple_repeat 4 146 0 1 1241 371 303 39 90 chr15 86057421 86057443 -17437531 - B4A SINE B4 -200 92 71 1 1241 236 169 0 33 chr15 86057884 86057945 -17437029 - L1MB8 LINE L1 -11 6167 6109 1 1241 585 0 0 0 chr15 86057946 86058011 -17436963 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 1241 189 0 0 0 chr15 86058011 86058031 -17436943 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1241 240 286 169 0 chr15 86058091 86058168 -17436806 - RSINE1 SINE B4 -72 93 4 1 1241 385 294 134 16 chr15 86058172 86058359 -17436615 - L1MB7 LINE L1 -68 6116 5908 1 1241 404 224 12 0 chr15 86058378 86058463 -17436511 - PB1D10 SINE Alu 0 117 32 1 1241 884 150 53 0 chr15 86058494 86058627 -17436347 - B1_Mus1 SINE Alu -8 140 1 1 1241 677 306 61 0 chr15 86058816 86058996 -17435978 - Tigger5 DNA MER2_type -2215 191 1 1 1241 446 189 166 10 chr15 86059003 86059104 -17435870 - PB1D10 SINE Alu -22 127 12 1 1241 241 275 85 71 chr15 86059009 86059027 -17435947 - MT2B2 LTR ERVL -315 269 222 1 1241 388 242 88 0 chr15 86059027 86059118 -17435856 - ID_B1 SINE B4 -48 176 78 1 1241 241 275 85 71 chr15 86059118 86059150 -17435824 - MT2B2 LTR ERVL -315 221 127 1 1241 1333 146 56 0 chr15 86059350 86059563 -17435411 + URR1B DNA MER1_type 1 225 0 1 1241 783 207 36 97 chr15 86059653 86059946 -17435028 + MTD LTR MaLR 114 419 0 1 1241 235 347 99 36 chr15 86061133 86061299 -17433675 - MIR SINE MIR -82 186 11 1 1241 256 298 89 24 chr15 86061384 86061508 -17433466 - MLT1G LTR MaLR -53 538 407 1 1241 448 297 108 84 chr15 86061795 86062045 -17432929 - B4A SINE B4 -36 256 1 1 1241 34 42 0 0 chr15 86063041 86063089 -17431885 + AT_rich Low_complexity Low_complexity 1 48 0 1 1241 682 259 7 27 chr15 86063098 86063245 -17431729 - RSINE1 SINE B4 -4 161 18 1 1241 667 255 50 69 chr15 86063278 86063480 -17431494 - B3A SINE B2 0 198 1 1 1241 963 238 153 18 chr15 86063567 86063901 -17431073 + Lx7 LINE L1 6893 7271 -425 1 1241 885 89 0 0 chr15 86063965 86064089 -17430885 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 1 1241 658 219 23 91 chr15 86064186 86064362 -17430612 - RSINE1 SINE B4 0 165 2 1 1241 1847 180 12 112 chr15 86067896 86068081 -17426893 - ORR1C1 LTR MaLR 0 378 216 1 1241 1158 55 0 20 chr15 86068081 86068230 -17426744 - B1_Mus2 SINE Alu 0 147 2 1 1241 1847 180 12 112 chr15 86068230 86068464 -17426510 - ORR1C1 LTR MaLR -163 215 1 1 1241 683 255 13 25 chr15 86068483 86068640 -17426334 + B4A SINE B4 134 288 -4 1 1241 207 100 0 0 chr15 86069094 86069124 -17425850 + (TGGG)n Simple_repeat Simple_repeat 2 31 0 1 1241 846 143 64 7 chr15 86070605 86070746 -17424228 - B1_Mur2 SINE Alu 0 149 1 1 1241 648 314 98 41 chr15 86074598 86074729 -17420245 - L1MA4 LINE L1 -371 5929 5782 1 1241 687 124 0 0 chr15 86074729 86074842 -17420132 + (TG)n Simple_repeat Simple_repeat 2 114 0 1 1241 648 300 158 44 chr15 86074842 86075779 -17419195 - L1MA4 LINE L1 -519 5781 4698 1 1241 1395 230 129 37 chr15 86076788 86077281 -17417693 - L1MA4 LINE L1 -1582 4298 3752 1 1241 2470 129 88 3 chr15 86077281 86077669 -17417305 + MTC LTR MaLR 1 421 0 1 1241 1395 230 129 37 chr15 86077669 86077739 -17417235 - L1MA4 LINE L1 -2129 3751 3683 1 1241 27 0 0 0 chr15 86077779 86077806 -17417168 + AT_rich Low_complexity Low_complexity 1 27 0 1 1241 322 200 139 28 chr15 86077811 86077883 -17417091 - RSINE1 SINE B4 0 165 86 1 1241 579 174 0 20 chr15 86077884 86078031 -17416943 + CT-rich Low_complexity Low_complexity 1 144 0 1 1241 371 21 21 0 chr15 86078044 86078092 -17416882 + (TTCTC)n Simple_repeat Simple_repeat 2 50 0 1 1241 324 322 33 22 chr15 86078092 86078173 -17416801 - RSINE1 SINE B4 -78 87 4 1 1241 638 234 78 16 chr15 86078173 86078429 -17416545 - L1MA4 LINE L1 -2544 3336 3065 1 1241 660 301 16 0 chr15 86078436 86078685 -17416289 - L1_Mur3 LINE L1 -1885 3995 3743 1 1241 24 77 0 0 chr15 86078817 86078869 -17416105 + AT_rich Low_complexity Low_complexity 1 52 0 1 1241 740 292 89 47 chr15 86078892 86079519 -17415455 - L1M4c LINE L1 -2409 3970 3297 1 1241 1083 199 30 0 chr15 86079519 86079720 -17415254 - B3 SINE B2 -5 211 5 1 1241 740 292 89 47 chr15 86079720 86080029 -17414945 - L1M4c LINE L1 -3083 3296 2995 1 1241 364 280 126 98 chr15 86080056 86080373 -17414601 - L1M4c LINE L1 -5252 1132 807 1 1241 1408 63 15 31 chr15 86080409 86080604 -17414370 - B2_Mm1a SINE B2 0 193 2 1 1241 210 200 89 0 chr15 86080624 86080669 -17414305 - ID4 SINE ID 0 83 35 1 1241 401 338 2 61 chr15 86081668 86081943 -17413031 - HAL1-2a_MD LINE L1 -498 2526 2345 1 1241 249 265 67 19 chr15 86082212 86082316 -17412658 - MLT1B LTR MaLR -95 295 187 1 1241 328 261 12 43 chr15 86082382 86082637 -17412337 + GA-rich Low_complexity Low_complexity 1 247 0 1 1241 664 90 41 14 chr15 86082649 86082796 -17412178 + (GA)n Simple_repeat Simple_repeat 2 152 0 1 1241 244 320 112 24 chr15 86082863 86082988 -17411986 - MLT1B LTR MaLR -254 136 1 1 1241 233 309 38 50 chr15 86083107 86083267 -17411707 + MIRc SINE MIR 35 192 -76 1 1241 509 296 32 13 chr15 86083467 86083621 -17411353 - B3 SINE B2 -4 212 56 1 1241 1546 47 10 15 chr15 86084548 86084743 -17410231 + B2_Mm2 SINE B2 2 195 0 1 1241 1338 224 74 36 chr15 86084973 86085338 -17409636 - MTEa LTR MaLR 0 379 1 1 1241 1142 198 20 0 chr15 86085645 86085842 -17409132 + B3 SINE B2 1 201 -15 1 1241 1513 122 283 0 chr15 86085843 86086129 -17408845 + ORR1B2 LTR MaLR 1 367 0 1 1241 193 294 14 81 chr15 86087001 86087075 -17407899 + MIR3 SINE MIR 118 186 -22 1 1241 960 35 0 0 chr15 86089434 86089549 -17405425 - B1_Mus1 SINE Alu 0 148 34 1 1241 310 248 55 121 chr15 86089440 86089605 -17405369 - B4A SINE B4 -71 221 68 1 1241 261 308 167 0 chr15 86090255 86090333 -17404641 + PB1D10 SINE Alu 21 111 -6 1 1241 212 162 26 51 chr15 86091759 86091837 -17403137 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 1 1241 890 167 34 11 chr15 86091849 86092025 -17402949 - B2_Mm2 SINE B2 -15 180 1 1 1241 413 365 76 10 chr15 86092959 86093250 -17401724 - L1ME4a LINE L1 -233 5891 5582 1 1241 1270 234 136 15 chr15 86093399 86093737 -17401237 - MTE2a LTR MaLR 0 379 1 1 1241 618 300 119 0 chr15 86095668 86095911 -17399063 - B4 SINE B4 -16 276 5 1 1241 234 296 19 0 chr15 86095918 86095972 -17399002 - B1F2 SINE Alu -94 55 1 1 1241 636 14 0 0 chr15 86096866 86096939 -17398035 + (TTCTC)n Simple_repeat Simple_repeat 1 73 0 1 1241 223 140 20 20 chr15 86096939 86096990 -17397984 + CT-rich Low_complexity Low_complexity 2 52 0 1 1241 346 283 30 71 chr15 86097184 86097283 -17397691 + MTE2b LTR MaLR 1 95 -284 1 1241 1037 255 38 26 chr15 86097387 86097698 -17397276 + MTE2b LTR MaLR 91 369 -1 1 1241 298 287 84 42 chr15 86099605 86099747 -17395227 - MIRb SINE MIR -70 198 51 1 1241 22 0 0 0 chr15 86100038 86100060 -17394914 + AT_rich Low_complexity Low_complexity 1 22 0 1 1241 855 221 36 10 chr15 86100601 86100793 -17394181 + B3A SINE B2 1 197 -1 1 1241 303 28 0 0 chr15 86102037 86102073 -17392901 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1241 240 182 36 18 chr15 86102075 86102131 -17392843 - RSINE1 SINE B4 -64 101 45 1 1241 289 360 75 37 chr15 86102364 86102658 -17392316 + L1M4c LINE L1 654 958 -5355 1 1241 775 241 239 9 chr15 86102734 86103073 -17391901 + MTD LTR MaLR 1 417 -2 1 1241 239 248 156 23 chr15 86103325 86103453 -17391521 + L1M4c LINE L1 1453 1597 -4716 1 1241 414 307 50 43 chr15 86103625 86103904 -17391070 + L1M4c LINE L1 1459 1739 -4645 1 1241 829 144 241 0 chr15 86104037 86104224 -17390750 + RMER1A Other Other 799 1030 0 1 1241 358 315 63 0 chr15 86104231 86104374 -17390600 + L1M4c LINE L1 4222 4373 -2003 1 1241 233 283 0 0 chr15 86105149 86105202 -17389772 + MIR SINE MIR 106 158 -104 1 1241 417 298 72 16 chr15 86108614 86108808 -17386166 - L1MC5 LINE L1 -48 7913 7709 1 1241 467 151 0 11 chr15 86109251 86109345 -17385629 + CT-rich Low_complexity Low_complexity 2 94 0 1 1241 239 204 54 36 chr15 86112517 86112573 -17382401 + MIRb SINE MIR 120 176 -92 1 1241 632 12 25 0 chr15 86112982 86113062 -17381912 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 1 1241 357 240 146 29 chr15 86113062 86113159 -17381815 - PB1D10 SINE Alu -6 111 3 1 1241 1804 153 102 6 chr15 86113837 86114172 -17380802 + ORR1B2 LTR MaLR 1 367 0 1 1242 677 299 86 26 chr15 86116102 86116452 -17378522 - L1MB8 LINE L1 -16 6162 5792 1 1242 242 327 65 37 chr15 86116452 86116560 -17378414 + ORR1E LTR MaLR 1 111 -248 1 1242 385 198 45 0 chr15 86117012 86117123 -17377851 - L1MB8 LINE L1 -743 5403 5288 1 1242 223 341 0 89 chr15 86117134 86117162 -17377812 - BC1_Mm scRNA scRNA -56 96 15 2 1242 256 339 0 0 chr15 86117162 86117224 -17377750 - tRNA-Ala-GCY_ tRNA tRNA -5 70 9 2 1242 324 120 0 0 chr15 86118799 86118849 -17376125 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 2 1242 651 177 133 0 chr15 86118849 86118962 -17376012 - B1_Mus2 SINE Alu -14 133 6 2 1242 557 226 212 11 chr15 86118994 86119173 -17375801 - B3 SINE B2 -1 215 1 2 1242 799 247 57 71 chr15 86119217 86119513 -17375461 - B4A SINE B4 0 292 1 2 1242 25 0 0 0 chr15 86119518 86119543 -17375431 + AT_rich Low_complexity Low_complexity 1 25 0 2 1242 854 178 13 20 chr15 86120050 86120199 -17374775 - B1_Mus1 SINE Alu 0 148 1 2 1242 301 294 98 25 chr15 86120749 86120871 -17374103 - L1MB8 LINE L1 -2318 3828 3698 1 1242 393 239 120 0 chr15 86120933 86121050 -17373924 + MIRc SINE MIR 100 230 -38 2 1242 243 0 0 0 chr15 86121109 86121136 -17373838 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1242 891 136 211 17 chr15 86121929 86122109 -17372865 + B3 SINE B2 2 216 0 2 1242 326 198 9 35 chr15 86123011 86123126 -17371848 + GA-rich Low_complexity Low_complexity 2 113 0 2 1242 1570 193 18 11 chr15 86125309 86125587 -17369387 - MTC LTR MaLR -14 407 128 2 1242 253 298 209 9 chr15 86126966 86127081 -17367893 - L2a LINE L2 0 3426 3289 2 1242 755 163 104 0 chr15 86128506 86128641 -17366333 - B1_Mur2 SINE Alu 0 149 1 2 1242 256 290 62 14 chr15 86129147 86129320 -17365654 + L1M4 LINE L1 5533 5717 -727 2 1242 477 0 0 0 chr15 86130205 86130258 -17364716 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 1242 393 248 81 52 chr15 86133443 86133579 -17361395 - B1F SINE Alu 0 149 10 2 1242 414 0 0 0 chr15 86133987 86134033 -17360941 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1242 294 314 84 55 chr15 86134556 86134758 -17360216 - MLT1J LTR MaLR -194 318 111 2 1242 1650 153 164 9 chr15 86135768 86136092 -17358882 - ORR1D1 LTR MaLR 0 374 1 2 1242 336 48 0 0 chr15 86136753 86136795 -17358179 + (TATAA)n Simple_repeat Simple_repeat 3 44 0 2 1242 480 143 0 0 chr15 86136932 86137030 -17357944 + (TC)n Simple_repeat Simple_repeat 1 98 0 2 1242 483 18 0 0 chr15 86137031 86137087 -17357887 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 1242 717 284 191 21 chr15 86137087 86138114 -17356860 - L1MA5 LINE L1 -384 5916 4678 2 1242 279 272 47 0 chr15 86138276 86138445 -17356529 + (GCTTG)n Simple_repeat Simple_repeat 3 179 0 2 1242 561 186 131 35 chr15 86138718 86138851 -17356123 - B3 SINE B2 0 216 86 2 1242 195 42 0 0 chr15 86138860 86138884 -17356090 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 2 1242 401 295 0 18 chr15 86138885 86138999 -17355975 - B4A SINE B4 -166 126 15 2 1242 390 91 0 0 chr15 86140218 86140273 -17354701 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 1242 520 320 17 67 chr15 86140275 86140513 -17354461 - B4A SINE B4 0 292 67 2 1242 312 259 24 12 chr15 86140575 86140657 -17354317 - ID4 SINE ID 0 83 1 2 1242 181 298 0 0 chr15 86140739 86140786 -17354188 - L2c LINE L2 -2 3385 3339 2 1242 212 292 0 0 chr15 86141770 86141818 -17353156 + polypyrimidine Low_complexity Low_complexity 1 48 0 2 1242 284 226 124 50 chr15 86142412 86142427 -17352547 - MT2B LTR ERVL -37 438 422 2 1242 255 31 0 0 chr15 86142427 86142459 -17352515 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 2 1242 867 216 52 43 chr15 86142459 86142693 -17352281 - MT2B LTR ERVL -55 546 309 2 1242 2992 20 48 3 chr15 86142693 86143044 -17351930 - IAPLTR1_Mm LTR ERVK 0 367 1 2 1242 28220 17 1 2 chr15 86143049 86146320 -17348654 - IAPEz-int LTR ERVK -4 6477 3210 2 1242 6895 91 104 34 chr15 86146319 86147536 -17347438 - IAPEz-int LTR ERVK -5168 1313 67 2 1242 1014 85 146 0 chr15 86147507 86147672 -17347302 - IAPEz-int LTR ERVK -6285 196 8 2 1242 2992 20 48 3 chr15 86147672 86148023 -17346951 - IAPLTR1_Mm LTR ERVK 0 367 1 2 1242 374 208 14 14 chr15 86148023 86148096 -17346878 - MT2B LTR ERVL -376 157 85 2 1242 2481 125 18 33 chr15 86148107 86148505 -17346469 + Lx4A LINE L1 6667 7058 0 2 1242 779 142 0 24 chr15 86148511 86148634 -17346340 - MT2B LTR ERVL -412 121 2 2 1242 366 23 0 0 chr15 86149025 86149068 -17345906 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1242 424 287 113 0 chr15 86149091 86149206 -17345768 - RSINE1 SINE B4 -30 135 8 2 1242 270 0 0 0 chr15 86150031 86150061 -17344913 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1242 507 285 88 36 chr15 86153063 86153360 -17341614 + MLT2C1 LTR ERVL 27 348 -49 2 1242 298 319 107 5 chr15 86153621 86153826 -17341148 + L1MB8 LINE L1 3734 3959 -2187 2 1242 269 70 0 44 chr15 86153838 86153883 -17341091 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 1242 865 54 9 0 chr15 86153884 86153996 -17340978 - B1_Mus1 SINE Alu -1 147 35 2 1242 297 247 76 76 chr15 86154127 86154141 -17340833 + MT2B LTR ERVL 145 236 -365 2 1242 333 286 13 13 chr15 86154141 86154219 -17340755 + B1_Mus2 SINE Alu 2 79 -68 2 1242 252 86 0 0 chr15 86154232 86154267 -17340707 + (TAAG)n Simple_repeat Simple_repeat 1 35 0 2 1242 644 286 85 14 chr15 86154302 86154717 -17340257 + L1MB8 LINE L1 5052 5496 -682 2 1242 1003 283 76 3 chr15 86154718 86155041 -17339933 + ORR1E LTR MaLR 2 366 -13 2 1242 299 257 131 7 chr15 86155083 86155228 -17339746 + L1MB8 LINE L1 6005 6167 -11 2 1242 351 0 0 0 chr15 86155712 86155751 -17339223 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1242 198 0 0 0 chr15 86155751 86155773 -17339201 + (CAG)n Simple_repeat Simple_repeat 3 24 0 2 1242 405 0 0 0 chr15 86155805 86155850 -17339124 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1242 351 0 0 0 chr15 86155898 86155937 -17339037 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1242 369 0 0 0 chr15 86155982 86156023 -17338951 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1242 315 0 0 0 chr15 86156071 86156106 -17338868 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1242 351 0 0 0 chr15 86156151 86156190 -17338784 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1242 252 0 0 0 chr15 86156190 86156218 -17338756 + (CAG)n Simple_repeat Simple_repeat 3 30 0 2 1242 246 32 0 0 chr15 86156250 86156281 -17338693 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1242 318 26 0 0 chr15 86156329 86156368 -17338606 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1242 180 0 0 0 chr15 86156368 86156388 -17338586 + (CAG)n Simple_repeat Simple_repeat 3 22 0 2 1242 228 35 0 0 chr15 86156419 86156448 -17338526 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1242 306 0 0 0 chr15 86156448 86156482 -17338492 + (CAG)n Simple_repeat Simple_repeat 1 34 0 2 1242 228 35 0 0 chr15 86156513 86156542 -17338432 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1242 441 0 0 0 chr15 86156590 86156639 -17338335 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1242 279 0 0 0 chr15 86156755 86156786 -17338188 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1242 258 56 0 0 chr15 86156831 86156867 -17338107 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1242 1632 52 0 0 chr15 86157712 86157905 -17337069 - B2_Mm1t SINE B2 0 193 1 2 1242 1056 247 120 3 chr15 86158983 86159284 -17335690 - MER2 DNA MER2_type -4 341 6 2 1242 1336 96 11 5 chr15 86159488 86159676 -17335298 + B2_Mm2 SINE B2 1 189 -6 2 1242 429 196 21 11 chr15 86159698 86159791 -17335183 + MTD LTR MaLR 5 98 -321 2 1242 320 299 14 7 chr15 86161815 86161960 -17333014 - L1M4 LINE L1 -659 5519 5374 2 1242 462 309 32 0 chr15 86162030 86162156 -17332818 - B1F SINE Alu 0 149 20 2 1242 195 42 0 0 chr15 86162342 86162366 -17332608 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 2 1242 265 276 129 45 chr15 86164390 86164614 -17330360 - L2 LINE L2 -615 2804 2562 2 1242 467 284 137 20 chr15 86167200 86167653 -17327321 - L1MC3 LINE L1 -383 7402 6897 2 1242 613 205 25 0 chr15 86167709 86167831 -17327143 + B1_Mur1 SINE Alu 3 127 -22 2 1242 398 314 44 0 chr15 86172679 86172816 -17322158 - B1F1 SINE Alu -5 144 2 2 1242 786 244 53 5 chr15 86173336 86173542 -17321432 + B3 SINE B2 1 216 0 2 1242 1012 222 141 19 chr15 86173799 86174061 -17320913 + MTE2b LTR MaLR 1 294 -85 2 1242 5170 61 0 2 chr15 86177869 86178511 -17316463 + L1Md_F2 LINE L1 5941 6581 -1 2 1242 375 214 93 40 chr15 86180449 86180600 -17314374 + L1MB7 LINE L1 5933 6091 -93 2 1242 21 57 0 0 chr15 86181834 86181869 -17313105 + AT_rich Low_complexity Low_complexity 1 35 0 2 1242 212 305 0 17 chr15 86182967 86183027 -17311947 - MIRm SINE MIR -15 261 203 2 1242 311 0 0 25 chr15 86184274 86184314 -17310660 + (TTA)n Simple_repeat Simple_repeat 2 40 0 2 1242 280 284 22 11 chr15 86184781 86184792 -17310182 + CYRA11_Mm Unknown Y-chromosome 161 250 -367 2 1242 420 184 0 26 chr15 86184792 86184870 -17310104 - URR1B DNA MER1_type 0 225 150 2 1242 762 53 0 0 chr15 86184869 86184963 -17310011 + B1_Mus2 SINE Alu 53 146 -1 2 1242 276 121 103 0 chr15 86184977 86185035 -17309939 - URR1B DNA MER1_type -72 153 90 2 1242 818 197 21 0 chr15 86185725 86185867 -17309107 - B1_Mur4 SINE Alu -5 145 1 2 1242 669 306 61 4 chr15 86185894 86186140 -17308834 - Charlie1a DNA MER1_type -1160 295 36 2 1242 768 40 0 0 chr15 86187175 86187275 -17307699 + (GA)n Simple_repeat Simple_repeat 1 100 0 2 1242 321 310 11 11 chr15 86187551 86187639 -17307335 + B3A SINE B2 65 152 -46 2 1242 584 182 182 0 chr15 86187681 86187807 -17307167 + B1_Mur1 SINE Alu 1 149 0 2 1242 356 188 23 12 chr15 86188193 86188279 -17306695 + 4.5SRNA scRNA scRNA 4 90 -4 2 1242 268 278 88 11 chr15 86188491 86188582 -17306392 - PB1D10 SINE Alu -2 118 21 2 1242 391 119 14 17 chr15 86190136 86190248 -17304726 - B2_Mm2 SINE B2 0 195 47 2 1242 1205 99 35 0 chr15 86190280 86190452 -17304522 - B2_Mm1t SINE B2 -14 179 2 2 1242 310 271 183 15 chr15 86190454 86190585 -17304389 - L1M5 LINE L1 -960 5186 5034 2 1242 1008 270 52 8 chr15 86190591 86190841 -17304133 - MTE2b LTR MaLR 0 379 119 2 1242 609 14 0 0 chr15 86191105 86191175 -17303799 + (TC)n Simple_repeat Simple_repeat 1 70 0 2 1242 249 167 0 0 chr15 86191176 86191230 -17303744 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 1242 1718 274 63 25 chr15 86191231 86191867 -17303107 - Lx9 LINE L1 -28 7616 6957 2 1242 456 135 0 0 chr15 86192318 86192392 -17302582 + (TCCC)n Simple_repeat Simple_repeat 1 74 0 2 1242 887 190 0 0 chr15 86192392 86192534 -17302440 - B1_Mus1 SINE Alu -5 143 2 2 1242 295 303 108 36 chr15 86192618 86192813 -17302161 - L1MC2 LINE L1 -72 6272 6064 2 1242 230 233 123 0 chr15 86192872 86192945 -17302029 - L1MC2 LINE L1 -387 5957 5876 2 1242 837 293 47 14 chr15 86193391 86193668 -17301306 + L3 LINE CR1 3508 3793 -696 2 1242 432 51 0 0 chr15 86194201 86194260 -17300714 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 1242 251 210 48 16 chr15 86194524 86194587 -17300387 - LTR79 LTR ERVL -37 490 426 3 1242 848 265 27 54 chr15 86196729 86196988 -17297986 - B4A SINE B4 0 292 41 3 1242 234 0 0 0 chr15 86199573 86199599 -17295375 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1242 387 0 0 0 chr15 86199599 86199641 -17295333 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 1242 273 241 149 46 chr15 86199956 86200043 -17294931 - B1F SINE Alu -45 104 9 3 1242 338 319 15 7 chr15 86203428 86203564 -17291410 + (CATA)n Simple_repeat Simple_repeat 3 139 0 3 1242 385 259 8 51 chr15 86203594 86203965 -17291009 + (CATATA)n Simple_repeat Simple_repeat 1 354 0 3 1242 274 307 20 0 chr15 86203978 86204079 -17290895 + (CATATA)n Simple_repeat Simple_repeat 5 107 0 3 1242 336 48 0 0 chr15 86204098 86204140 -17290834 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1242 286 208 12 83 chr15 86204543 86204627 -17290347 - MLT1A LTR MaLR -241 133 56 3 1242 249 14 129 0 chr15 86208867 86208937 -17286037 + (TCCA)n Simple_repeat Simple_repeat 2 80 0 3 1242 363 283 91 138 chr15 86209476 86209751 -17285223 + MLT1E1 LTR MaLR 266 527 -127 3 1242 3117 170 204 73 chr15 86210061 86210853 -17284121 - RMER19B LTR ERVK -6 896 1 3 1242 180 111 0 0 chr15 86211067 86211094 -17283880 + (TGG)n Simple_repeat Simple_repeat 2 28 0 3 1242 326 301 205 11 chr15 86212119 86212304 -17282670 + L1MC LINE L1 2152 2372 -3774 3 1242 271 352 40 8 chr15 86212508 86212634 -17282340 + L1MD LINE L1 2531 2660 -3486 3 1242 248 313 41 41 chr15 86212709 86212879 -17282095 + L1MD LINE L1 2783 2952 -3194 3 1242 360 0 0 0 chr15 86213099 86213139 -17281835 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 3 1242 795 314 156 49 chr15 86213139 86214123 -17280851 + L1MD LINE L1 3279 4360 -1786 3 1242 846 225 129 66 chr15 86214123 86214394 -17280580 + B4 SINE B4 3 290 -2 3 1242 346 287 168 68 chr15 86214394 86214698 -17280276 + L1MD LINE L1 4361 4715 -1431 3 1242 1096 258 36 14 chr15 86215137 86215412 -17279562 + B4A SINE B4 2 282 -10 3 1242 486 0 0 0 chr15 86215420 86215474 -17279500 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 1242 21 0 0 0 chr15 86219486 86219507 -17275467 + AT_rich Low_complexity Low_complexity 1 21 0 3 1242 322 319 107 40 chr15 86220002 86220152 -17274822 - MLT1A1 LTR MaLR -3 405 246 3 1242 2193 157 82 8 chr15 86220708 86221100 -17273874 + MTC LTR MaLR 1 421 0 3 1242 287 305 97 22 chr15 86221270 86221295 -17273679 - B4A SINE B4 -148 144 1 3 1242 644 193 0 0 chr15 86221295 86221404 -17273570 - B3 SINE B2 -107 109 1 3 1242 198 128 0 0 chr15 86222243 86222282 -17272692 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 3 1242 360 129 5 24 chr15 86222316 86222430 -17272544 - B2_Mm2 SINE B2 0 195 47 3 1242 1361 84 22 0 chr15 86222460 86222639 -17272335 - B2_Mm2 SINE B2 -12 183 1 3 1242 1156 75 0 7 chr15 86222675 86222822 -17272152 + B1_Mus2 SINE Alu 1 146 -1 3 1242 810 248 179 105 chr15 86223294 86223646 -17271328 + MTE2b LTR MaLR 1 378 -1 3 1242 390 322 97 11 chr15 86225748 86225924 -17269050 + MLT1F2 LTR MaLR 242 432 -128 3 1242 1455 193 14 14 chr15 86231635 86231913 -17263061 - RMER13B LTR ERVK 0 908 631 3 1242 363 148 0 0 chr15 86231910 86231964 -17263010 - RMER13B LTR ERVK -854 54 1 3 1242 500 151 27 0 chr15 86233239 86233312 -17261662 + ID4_ SINE ID 1 75 -8 3 1242 1143 238 108 20 chr15 86236799 86237207 -17257767 - Ricksha DNA MuDR -71 3175 2732 3 1242 780 247 31 26 chr15 86237339 86237534 -17257440 + B3A SINE B2 1 196 -2 3 1242 458 268 49 43 chr15 86238288 86238319 -17256655 + B4A SINE B4 41 156 -136 3 1242 482 213 0 115 chr15 86238319 86238339 -17256635 + MT2B LTR ERVL 150 155 -446 3 1242 964 87 0 0 chr15 86238339 86238465 -17256509 + B1_Mus2 SINE Alu 1 126 -21 3 1242 458 268 49 43 chr15 86238441 86238452 -17256522 + B4A SINE B4 157 205 -87 3 1242 429 336 51 31 chr15 86238465 86238720 -17256254 - Ricksha DNA MuDR -939 2307 2048 3 1242 324 103 0 0 chr15 86239129 86239187 -17255787 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 1242 242 255 86 67 chr15 86239351 86239456 -17255518 - MLT1F LTR MaLR -11 568 462 3 1242 279 208 0 0 chr15 86239577 86239625 -17255349 - MLT1F LTR MaLR -295 253 206 3 1242 1312 202 133 47 chr15 86240157 86240495 -17254479 - ORR1B2 LTR MaLR 0 367 1 3 1242 573 310 25 70 chr15 86242395 86242638 -17252336 + B4A SINE B4 9 240 -52 3 1243 244 169 50 17 chr15 86246229 86246289 -17248685 + CT-rich Low_complexity Low_complexity 4 65 0 3 1243 228 306 16 0 chr15 86246298 86246360 -17248614 - ID_B1 SINE B4 -78 146 84 3 1243 276 220 0 0 chr15 86246311 86246361 -17248613 - B1F1 SINE Alu -98 51 2 3 1243 361 241 71 36 chr15 86247492 86247604 -17247370 - PB1D10 SINE Alu 0 117 2 3 1243 195 393 76 38 chr15 86250757 86250995 -17243979 - L3 LINE CR1 -29 4460 4214 3 1243 702 266 27 38 chr15 86251486 86251670 -17243304 - B3A SINE B2 -16 182 1 3 1243 326 324 70 47 chr15 86251846 86252060 -17242914 + L1MD LINE L1 2289 2507 -3639 3 1243 317 333 138 34 chr15 86252211 86252776 -17242198 + L1M5 LINE L1 2724 3347 -2799 3 1243 1340 249 34 13 chr15 86252889 86253268 -17241706 + L1M5 LINE L1 3593 3979 -2167 3 1243 459 201 0 0 chr15 86253482 86253631 -17241343 + (CAGC)n Simple_repeat Simple_repeat 2 150 0 3 1243 562 327 142 31 chr15 86253707 86254227 -17240747 + L1M5 LINE L1 4249 4826 -1320 3 1243 242 292 53 10 chr15 86254310 86254453 -17240521 + L1M5 LINE L1 5309 5458 -986 3 1243 1148 43 43 0 chr15 86254993 86255132 -17239842 + B1_Mm SINE Alu 3 147 0 3 1243 240 100 0 0 chr15 86255132 86255172 -17239802 + (A)n Simple_repeat Simple_repeat 1 40 0 3 1243 248 364 73 12 chr15 86255461 86255625 -17239349 - MER3 DNA MER1_type -5 204 31 3 1243 541 331 31 24 chr15 86256179 86256467 -17238507 - B4A SINE B4 -2 290 1 3 1243 23 0 0 0 chr15 86256507 86256530 -17238444 + AT_rich Low_complexity Low_complexity 1 23 0 3 1243 26 0 0 0 chr15 86258338 86258364 -17236610 + AT_rich Low_complexity Low_complexity 1 26 0 3 1243 22 35 0 0 chr15 86258544 86258573 -17236401 + AT_rich Low_complexity Low_complexity 1 29 0 3 1243 617 269 94 5 chr15 86259880 86260104 -17234870 - Lx8 LINE L1 -599 6874 6631 3 1243 180 111 0 0 chr15 86260298 86260325 -17234649 + (TCCCC)n Simple_repeat Simple_repeat 1 27 0 3 1243 641 219 24 0 chr15 86261625 86261748 -17233226 - B1F SINE Alu -1 148 23 3 1243 859 274 116 47 chr15 86263176 86263563 -17231411 + MLT2D LTR ERVL 1 414 0 3 1243 399 157 0 0 chr15 86264297 86264367 -17230607 + (TA)n Simple_repeat Simple_repeat 2 71 0 3 1243 1169 274 100 71 chr15 86265670 86266429 -17228545 + L1MA9 LINE L1 5525 6305 -7 3 1243 251 279 0 0 chr15 86266533 86266619 -17228355 + Lx7 LINE L1 7394 7479 -217 3 1243 6852 48 7 0 chr15 86266597 86267470 -17227504 - L1Md_F2 LINE L1 0 6582 5704 3 1243 968 238 139 24 chr15 86269213 86269368 -17225606 + ORR1D2 LTR MaLR 1 179 -191 3 1243 387 0 0 0 chr15 86269368 86269411 -17225563 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 1243 968 238 139 24 chr15 86269411 86269587 -17225387 + ORR1D2 LTR MaLR 180 370 0 3 1243 620 304 0 30 chr15 86272675 86272841 -17222133 + RSINE1 SINE B4 1 161 -4 3 1243 347 332 193 22 chr15 86272894 86273309 -17221665 + L1MEg LINE L1 1009 1494 -4748 3 1243 273 57 0 0 chr15 86273620 86273655 -17221319 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1243 438 120 0 0 chr15 86274249 86274324 -17220650 + (CA)n Simple_repeat Simple_repeat 2 76 0 3 1243 258 250 191 9 chr15 86274541 86274646 -17220328 + L1MEg LINE L1 4980 5103 -1043 3 1243 349 286 430 0 chr15 86274968 86275163 -17219811 + L1MEg LINE L1 5490 5768 -676 3 1243 294 329 50 75 chr15 86275961 86276122 -17218852 - RMER15 LTR ERVL -12 563 407 3 1243 2198 141 93 33 chr15 86276679 86277076 -17217898 - MTC LTR MaLR 0 421 1 3 1243 337 210 37 0 chr15 86277203 86277284 -17217690 + PB1D10 SINE Alu 28 111 -6 3 1243 234 0 0 0 chr15 86278422 86278448 -17216526 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 3 1243 898 133 0 7 chr15 86278448 86278592 -17216382 - B1_Mur4 SINE Alu -2 148 6 3 1243 251 340 43 0 chr15 86280059 86280153 -17214821 + MIR SINE MIR 36 133 -129 3 1243 1322 284 105 12 chr15 86284366 86284836 -17210138 + Lx6 LINE L1 6565 7401 -59 3 1243 229 134 187 2 chr15 86285201 86285264 -17209710 + PB1 SINE Alu 41 116 -11 3 1243 400 348 159 57 chr15 86285775 86286058 -17208916 - MLT1A0 LTR MaLR -38 327 16 3 1243 247 325 204 16 chr15 86286534 86286725 -17208249 - MER68 LTR ERVL -273 290 64 3 1243 468 0 0 0 chr15 86290399 86290451 -17204523 + (GTGTG)n Simple_repeat Simple_repeat 3 54 0 3 1243 394 190 33 39 chr15 86290563 86290744 -17204230 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 3 1243 422 169 45 39 chr15 86290789 86290968 -17204006 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 3 1243 366 188 6 69 chr15 86290990 86291150 -17203824 + (GTGTG)n Simple_repeat Simple_repeat 1 150 0 3 1243 423 202 11 58 chr15 86291166 86291355 -17203619 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 3 1243 465 19 0 0 chr15 86293576 86293630 -17201344 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 1243 495 148 92 9 chr15 86295315 86295424 -17199550 + Lx9 LINE L1 7521 7638 -6 3 1243 252 0 0 0 chr15 86295906 86295934 -17199040 + (C)n Simple_repeat Simple_repeat 1 28 0 3 1243 894 135 64 6 chr15 86296182 86296353 -17198621 + URR1B DNA MER1_type 45 225 0 3 1243 2441 330 121 29 chr15 86296353 86297646 -17197328 + MTE-int LTR MaLR 135 1549 -31 3 1243 4545 204 54 41 chr15 86298131 86299220 -17195754 - RLTR25A LTR ERVK 0 1103 1 3 1243 1553 161 139 9 chr15 86299308 86299647 -17195327 + ORR1C2 LTR MaLR 1 383 -1 3 1243 5316 196 155 49 chr15 86299650 86301013 -17193961 + ORR1C2-int LTR MaLR 3 1509 0 3 1243 1003 191 5 23 chr15 86303422 86303636 -17191338 - RLTR11A2 LTR ERVK 0 527 318 3 1243 340 240 226 49 chr15 86304099 86304291 -17190683 - MLT1A0 LTR MaLR -2 465 147 3 1243 630 39 0 0 chr15 86306253 86306330 -17188644 + (CA)n Simple_repeat Simple_repeat 1 77 0 3 1243 486 0 0 0 chr15 86306517 86306571 -17188403 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 1243 396 59 0 0 chr15 86306571 86306621 -17188353 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1243 187 312 48 36 chr15 86306655 86306738 -17188236 - MIR SINE MIR -94 114 31 3 1243 230 373 7 22 chr15 86307220 86307357 -17187617 + (CCCA)n Simple_repeat Simple_repeat 1 135 0 3 1243 823 235 152 5 chr15 86310316 86310607 -17184367 + MTE2b LTR MaLR 62 371 -8 3 1243 335 282 293 9 chr15 86310610 86310831 -17184143 - L1MB2 LINE L1 -266 5905 5591 3 1243 208 143 0 0 chr15 86315739 86315774 -17179200 + (T)n Simple_repeat Simple_repeat 1 35 0 3 1243 521 295 82 64 chr15 86317855 86318193 -17176781 + MTEa LTR MaLR 2 370 -9 4 1243 1359 36 0 0 chr15 86318276 86318441 -17176533 + (TC)n Simple_repeat Simple_repeat 1 165 0 4 1243 690 249 68 63 chr15 86318488 86318694 -17176280 - B4 SINE B4 -84 208 2 4 1243 282 350 20 10 chr15 86320178 86320279 -17174695 - PB1D10 SINE Alu -13 104 3 4 1243 680 197 0 30 chr15 86320323 86320454 -17174520 + MT2A LTR ERVL 1 127 -406 4 1243 608 199 60 29 chr15 86320445 86320590 -17174384 + MT2A LTR ERVL 85 217 -316 4 1243 254 254 17 0 chr15 86320592 86320651 -17174323 + Ricksha_c DNA MuDR 855 914 -1134 4 1243 298 298 16 16 chr15 86320797 86320920 -17174054 - Charlie5 DNA MER1_type -97 2527 2405 4 1243 720 266 177 16 chr15 86322520 86322768 -17172206 + B4 SINE B4 3 290 -2 4 1243 365 269 66 22 chr15 86323040 86323177 -17171797 - MIR SINE MIR -112 150 8 4 1243 2579 189 38 18 chr15 86323817 86324366 -17170608 + RLTR20B2 LTR ERVK 1 560 0 4 1243 195 292 14 97 chr15 86324372 86324444 -17170530 + MER5B DNA MER1_type 113 178 0 4 1243 533 271 23 0 chr15 86328980 86329109 -17165865 - RSINE1 SINE B4 -21 144 13 4 1243 874 250 119 56 chr15 86330159 86330604 -17164370 + L1M3 LINE L1 3491 3963 -2177 4 1243 717 143 21 50 chr15 86330604 86330744 -17164230 + B1_Mur4 SINE Alu 15 150 0 4 1243 526 299 161 87 chr15 86330779 86331303 -17163671 + L1M3 LINE L1 3968 4509 -1634 4 1243 3437 38 5 0 chr15 86331303 86331697 -17163277 - MTA_Mm LTR MaLR 0 396 1 4 1243 526 299 161 87 chr15 86331697 86331898 -17163076 + L1M3 LINE L1 4510 4747 -1396 4 1243 1181 223 153 93 chr15 86331934 86331970 -17163004 - MT2A LTR ERVL -7 526 490 4 1243 378 0 0 0 chr15 86331970 86332012 -17162962 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 4 1243 1181 223 153 93 chr15 86332012 86332459 -17162515 - MT2A LTR ERVL -44 489 14 4 1243 431 269 37 0 chr15 86332872 86332980 -17161994 - RSINE1 SINE B4 -8 157 46 4 1243 230 108 0 51 chr15 86333275 86333314 -17161660 + MLT1E3 LTR MaLR 588 624 0 4 1243 180 111 0 0 chr15 86333620 86333647 -17161327 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 4 1243 209 33 33 0 chr15 86333647 86333677 -17161297 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1243 472 248 47 9 chr15 86333698 86333804 -17161170 - RSINE1 SINE B4 -45 120 11 4 1243 339 378 28 11 chr15 86333928 86334110 -17160864 - L1M5 LINE L1 -408 5754 5570 4 1243 352 330 23 11 chr15 86334576 86334751 -17160223 + C-rich Low_complexity Low_complexity 3 179 0 4 1243 267 170 12 37 chr15 86334804 86334877 -17160097 + B1_Mus2 SINE Alu 69 137 -12 4 1243 369 0 0 0 chr15 86334877 86334918 -17160056 + (CAAAA)n Simple_repeat Simple_repeat 3 43 0 4 1243 236 300 11 0 chr15 86334937 86335027 -17159947 + L1MD LINE L1 5501 5591 -2404 4 1243 311 278 131 0 chr15 86335298 86335489 -17159485 + L1MC1 LINE L1 5931 6146 -187 4 1243 3646 238 51 6 chr15 86335654 86336502 -17158472 + RCHARR1 DNA MER1_type 13 898 -76 4 1243 1134 254 75 11 chr15 86336516 86336795 -17158179 - ORR1E LTR MaLR -2 357 61 4 1243 701 183 0 32 chr15 86336891 86337077 -17157897 + GA-rich Low_complexity Low_complexity 1 180 0 4 1243 312 189 78 39 chr15 86337131 86337208 -17157766 + L1M4 LINE L1 3407 3486 -2660 4 1243 1230 258 28 96 chr15 86338154 86338582 -17156392 + MT2A LTR ERVL 1 399 -134 4 1243 235 267 253 11 chr15 86338821 86338912 -17156062 - MIRb SINE MIR -139 129 17 4 1243 351 0 0 0 chr15 86342117 86342156 -17152818 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1243 608 217 116 0 chr15 86342809 86342947 -17152027 + MTD LTR MaLR 234 387 -32 4 1243 231 253 11 141 chr15 86343198 86343290 -17151684 + MLT1J2 LTR MaLR 198 277 -171 4 1243 222 116 0 0 chr15 86344110 86344153 -17150821 + (T)n Simple_repeat Simple_repeat 1 43 0 4 1243 393 22 0 0 chr15 86344811 86344857 -17150117 + (TATG)n Simple_repeat Simple_repeat 4 49 0 4 1243 1223 269 112 65 chr15 86345045 86345537 -17149437 + RMER15 LTR ERVL 1 515 -60 4 1243 273 283 0 98 chr15 86346926 86347028 -17147946 + MLT1E3 LTR MaLR 530 621 -3 4 1243 516 226 25 59 chr15 86347246 86347464 -17147510 - L1MA5 LINE L1 -301 5999 5789 4 1243 1991 301 108 33 chr15 86347451 86348400 -17146574 - Lx9 LINE L1 -14 7630 6611 4 1243 363 269 0 0 chr15 86348471 86348549 -17146425 - ID4 SINE ID -4 79 2 4 1243 335 345 7 20 chr15 86348552 86348700 -17146274 - L1MA5 LINE L1 -511 5780 5635 4 1243 2471 92 0 9 chr15 86348949 86349279 -17145695 + ORR1A2 LTR MaLR 1 327 0 4 1243 247 333 18 37 chr15 86349404 86349513 -17145461 + MLT1N2 LTR MaLR 454 560 -2 4 1243 789 229 28 16 chr15 86350443 86350625 -17144349 - B3A SINE B2 -14 184 1 4 1243 273 238 16 0 chr15 86350958 86351021 -17143953 - Cheshire DNA MER1_type 0 2420 2357 4 1243 596 264 32 86 chr15 86351719 86351785 -17143189 - MT2A LTR ERVL 0 533 469 4 1243 456 67 0 0 chr15 86351785 86351845 -17143129 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 1243 549 0 0 0 chr15 86351845 86351905 -17143069 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 1243 596 259 47 85 chr15 86351905 86352118 -17142856 - MT2A LTR ERVL -65 468 190 4 1243 1029 74 0 0 chr15 86352137 86352285 -17142689 + (TCC)n Simple_repeat Simple_repeat 2 149 0 4 1243 4439 30 2 0 chr15 86352299 86352804 -17142170 - L1Md_T LINE L1 -1 6581 6076 4 1243 228 303 34 0 chr15 86352883 86352972 -17142002 + Lx8 LINE L1 7142 7233 -240 4 1243 779 80 9 0 chr15 86352972 86353084 -17141890 + (TTCC)n Simple_repeat Simple_repeat 4 116 0 4 1243 25761 98 6 4 chr15 86353105 86354434 -17140540 - L1_Mus4 LINE L1 -18 6618 5295 4 1243 1294 93 5 21 chr15 86354434 86354621 -17140353 - B2_Mm1t SINE B2 -9 184 1 4 1243 25761 140 15 7 chr15 86354621 86359416 -17135558 - L1_Mus4 LINE L1 -589 5294 453 4 1243 323 282 84 65 chr15 86359799 86360061 -17134913 - L1MD LINE L1 -1576 4570 4304 4 1243 287 328 49 69 chr15 86360206 86360350 -17134624 - B4 SINE B4 -68 224 84 4 1243 476 207 0 11 chr15 86360258 86360346 -17134628 - B1_Mur3 SINE Alu -60 89 3 4 1243 292 278 0 110 chr15 86360346 86360361 -17134613 - MT2B LTR ERVL -351 227 154 4 1243 1036 255 11 66 chr15 86360374 86360647 -17134327 - MTEa LTR MaLR -95 284 27 4 1243 225 94 0 0 chr15 86361410 86361442 -17133532 + (TCC)n Simple_repeat Simple_repeat 2 33 0 4 1243 304 283 0 66 chr15 86362336 86362442 -17132532 + Charlie1 DNA MER1_type 940 1038 -1743 4 1243 423 308 0 0 chr15 86362721 86362828 -17132146 + B4 SINE B4 2 108 -184 4 1243 661 227 70 0 chr15 86362843 86362971 -17132003 + B4 SINE B4 84 220 -72 4 1243 221 117 30 91 chr15 86362975 86363041 -17131933 + (CAAA)n Simple_repeat Simple_repeat 2 63 0 4 1243 892 238 81 14 chr15 86363241 86363450 -17131524 + B4A SINE B4 7 229 -63 4 1243 432 0 0 0 chr15 86363450 86363498 -17131476 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 1243 378 0 0 0 chr15 86363560 86363602 -17131372 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1243 645 272 32 21 chr15 86363609 86363797 -17131177 + Charlie1 DNA MER1_type 849 1038 -1743 4 1243 233 289 162 0 chr15 86364048 86364190 -17130784 + MIRb SINE MIR 57 221 -47 4 1243 238 356 10 0 chr15 86365000 86365104 -17129870 + (CCCA)n Simple_repeat Simple_repeat 3 107 0 4 1243 679 197 11 0 chr15 86365178 86365356 -17129618 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 4 1243 183 272 0 0 chr15 86366463 86366544 -17128430 + (TGG)n Simple_repeat Simple_repeat 1 81 0 4 1243 491 280 43 54 chr15 86366569 86366754 -17128220 - HAL1-2a_MD LINE L1 -505 2519 2337 4 1243 303 295 28 9 chr15 86366754 86366860 -17128114 + (TGG)n Simple_repeat Simple_repeat 1 108 0 4 1243 458 279 109 17 chr15 86366862 86367066 -17127908 - MIR SINE MIR -1 261 44 4 1243 190 260 154 13 chr15 86367305 86367383 -17127591 - MIRc SINE MIR -136 132 44 4 1243 254 154 77 0 chr15 86367404 86367456 -17127518 + LTR79 LTR ERVL 1 56 -471 4 1243 753 198 18 48 chr15 86368887 86369075 -17125899 + ORR1A2 LTR MaLR 185 359 0 4 1243 260 299 80 7 chr15 86369081 86369219 -17125755 - L1MEe LINE L1 -4577 277 130 4 1243 324 120 0 0 chr15 86369263 86369313 -17125661 + (TTCA)n Simple_repeat Simple_repeat 4 53 0 4 1243 620 212 34 0 chr15 86369319 86369437 -17125537 - RSINE1 SINE B4 -13 152 31 4 1243 413 194 28 11 chr15 86370273 86370450 -17124524 + CT-rich Low_complexity Low_complexity 1 180 0 4 1243 3303 47 5 0 chr15 86370550 86370953 -17124021 - L1Md_F2 LINE L1 -2 6580 6176 4 1243 3034 98 255 0 chr15 86370971 86371481 -17123493 + RMER19A LTR ERVK 98 737 0 4 1243 768 267 153 4 chr15 86373680 86373921 -17121053 + B4 SINE B4 2 278 -14 4 1244 251 175 35 17 chr15 86377255 86377313 -17117661 - MLT2D LTR ERVL -2 558 500 4 1244 852 46 0 0 chr15 86377419 86377528 -17117446 + (CA)n Simple_repeat Simple_repeat 1 109 0 4 1244 4561 123 30 14 chr15 86377531 86378263 -17116711 + RMER6A LTR ERVK 1 744 -12 4 1244 492 242 7 20 chr15 86378497 86378614 -17116360 - MTE-int LTR MaLR -1143 437 331 4 1244 731 259 12 53 chr15 86378617 86378788 -17116186 + B3A SINE B2 1 164 -34 4 1244 375 23 0 0 chr15 86378792 86378836 -17116138 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1244 1197 266 75 15 chr15 86378852 86379184 -17115790 - MTE-int LTR MaLR -1215 365 14 4 1244 238 335 83 96 chr15 86379230 86379448 -17115526 - ORR1E LTR MaLR -60 299 85 4 1244 1215 147 22 26 chr15 86379681 86379912 -17115062 - LTRIS5 LTR ERV1 0 447 218 4 1244 407 94 47 0 chr15 86379970 86380034 -17114940 - LTRIS5 LTR ERV1 -380 67 1 4 1244 297 359 70 50 chr15 86380058 86380316 -17114658 + BLACKJACK DNA AcHobo 526 788 -2156 4 1244 1180 314 106 67 chr15 86380653 86381585 -17113389 + BLACKJACK DNA AcHobo 1322 2290 -654 4 1244 922 294 17 5 chr15 86381589 86381831 -17113143 + B4A SINE B4 9 265 -27 4 1244 392 117 26 26 chr15 86381904 86382018 -17112956 + (CAGA)n Simple_repeat Simple_repeat 1 114 0 4 1244 27 0 0 0 chr15 86382233 86382260 -17112714 + AT_rich Low_complexity Low_complexity 1 27 0 4 1244 770 184 162 13 chr15 86382340 86382656 -17112318 + MTE2a LTR MaLR 1 363 -16 4 1244 794 241 47 66 chr15 86382701 86382914 -17112060 - B3 SINE B2 -7 209 1 5 1244 283 228 86 86 chr15 86382914 86383035 -17111939 + BLACKJACK DNA AcHobo 2660 2780 -164 4 1244 1413 187 43 86 chr15 86383035 86383339 -17111635 + ORR1C1 LTR MaLR 1 291 -87 5 1244 279 0 0 0 chr15 86384921 86384952 -17110022 + (TC)n Simple_repeat Simple_repeat 1 31 0 5 1244 270 0 0 0 chr15 86385619 86385649 -17109325 + (TC)n Simple_repeat Simple_repeat 2 31 0 5 1244 812 59 0 17 chr15 86385662 86385782 -17109192 + (GGGAGA)n Simple_repeat Simple_repeat 3 120 0 5 1244 24 0 0 0 chr15 86387214 86387238 -17107736 + AT_rich Low_complexity Low_complexity 1 24 0 5 1244 362 173 12 28 chr15 86387277 86387357 -17107617 + B1F SINE Alu 37 135 -14 5 1244 302 260 25 25 chr15 86387367 86387446 -17107528 - ID4_ SINE ID -3 80 2 5 1244 543 260 158 66 chr15 86387536 86387795 -17107179 - B4 SINE B4 -8 284 2 5 1244 408 198 12 0 chr15 86387795 86387881 -17107093 - L1M2 LINE L1 -506 5794 5708 5 1244 774 220 14 0 chr15 86387882 86388023 -17106951 + ID_B1 SINE B4 81 223 -1 5 1244 1212 236 165 9 chr15 86389050 86389384 -17105590 - MTD LTR MaLR -13 406 21 5 1244 264 292 184 9 chr15 86389586 86389700 -17105274 - MLT1I LTR MaLR -82 329 196 5 1244 3124 78 82 2 chr15 86390201 86390641 -17104333 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1244 360 295 144 59 chr15 86390701 86390903 -17104071 + MLT1D LTR MaLR 135 353 -152 5 1244 251 330 57 48 chr15 86390917 86391022 -17103952 + MLT1D LTR MaLR 400 505 0 5 1244 537 16 0 0 chr15 86391260 86391322 -17103652 + (GA)n Simple_repeat Simple_repeat 1 62 0 5 1244 494 295 62 25 chr15 86392752 86392912 -17102062 - RMER30 DNA MER1_type -18 184 19 5 1244 393 102 0 0 chr15 86393867 86393926 -17101048 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1244 707 308 34 19 chr15 86393938 86394206 -17100768 - B4A SINE B4 -20 272 1 5 1244 2258 101 3 109 chr15 86394770 86395136 -17099838 - ORR1A2 LTR MaLR 0 327 1 5 1244 207 382 39 0 chr15 86395139 86395241 -17099733 - MIRb SINE MIR -117 151 46 5 1244 256 299 22 22 chr15 86395431 86395520 -17099454 + L1M5 LINE L1 5695 5783 -341 5 1244 1168 305 72 22 chr15 86396183 86396639 -17098335 - Zaphod DNA Tip100 -5 4026 3548 5 1244 287 119 0 0 chr15 86396653 86396695 -17098279 + B2_Mm2 SINE B2 1 42 -153 5 1244 522 0 0 0 chr15 86396955 86397013 -17097961 + (TC)n Simple_repeat Simple_repeat 2 59 0 5 1244 225 0 0 0 chr15 86397013 86397037 -17097937 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1244 432 0 0 0 chr15 86397240 86397288 -17097686 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1244 330 45 0 0 chr15 86397851 86397895 -17097079 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1244 912 258 116 8 chr15 86397897 86398139 -17096835 - B4A SINE B4 -23 269 2 5 1244 234 261 11 32 chr15 86398140 86398235 -17096739 + MER96B DNA hAT 82 174 -243 5 1244 200 269 74 37 chr15 86399602 86399683 -17095291 + L4 LINE RTE 1745 1828 -201 5 1244 1351 266 62 23 chr15 86400845 86401234 -17093740 + MTD LTR MaLR 2 405 -14 5 1244 518 282 124 73 chr15 86401291 86401566 -17093408 + MLT1D LTR MaLR 127 415 -90 5 1244 270 0 0 0 chr15 86402232 86402262 -17092712 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1244 851 231 3 0 chr15 86404264 86404628 -17090346 + (TCCA)n Simple_repeat Simple_repeat 1 365 0 5 1244 1138 47 0 7 chr15 86405678 86405829 -17089145 + L1Md_F3 LINE L1 6435 6584 0 5 1244 620 37 0 24 chr15 86406155 86406239 -17088735 + (TCCC)n Simple_repeat Simple_repeat 3 84 0 5 1244 198 292 64 34 chr15 86407788 86407920 -17087054 + MIRc SINE MIR 37 164 -98 5 1244 388 352 53 61 chr15 86408057 86408302 -17086672 - MLT1C LTR MaLR 0 467 225 5 1244 219 36 0 0 chr15 86409960 86409988 -17084986 + (TGGGGG)n Simple_repeat Simple_repeat 3 30 0 5 1244 3166 58 2 29 chr15 86411230 86411639 -17083335 + MTB LTR MaLR 1 398 -2 5 1244 180 0 0 0 chr15 86411645 86411665 -17083309 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 5 1244 713 336 60 12 chr15 86412358 86412689 -17082285 + MLT1B LTR MaLR 6 352 -38 5 1244 682 283 0 0 chr15 86413837 86413975 -17080999 + RSINE1 SINE B4 13 150 -15 5 1244 342 0 0 0 chr15 86414291 86414329 -17080645 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1244 1408 236 118 11 chr15 86415472 86415820 -17079154 - MTD LTR MaLR -14 405 21 5 1244 216 0 0 0 chr15 86415820 86415844 -17079130 + (CAAAA)n Simple_repeat Simple_repeat 5 28 0 5 1244 358 375 0 8 chr15 86415999 86416128 -17078846 - MER2B DNA MER2_type -8 328 201 5 1244 373 305 48 28 chr15 86416124 86416269 -17078705 - B1F SINE Alu -1 148 1 5 1244 1084 254 14 39 chr15 86416278 86416598 -17078376 + ORR1E LTR MaLR 1 322 -62 5 1244 384 341 15 15 chr15 86416544 86416678 -17078296 - B4 SINE B4 -154 138 5 5 1244 212 261 8 15 chr15 86416678 86416947 -17078027 + (TG)n Simple_repeat Simple_repeat 1 266 0 5 1244 868 70 16 0 chr15 86416947 86417076 -17077898 + (GA)n Simple_repeat Simple_repeat 1 131 0 5 1244 480 62 0 0 chr15 86417076 86417139 -17077835 + (TG)n Simple_repeat Simple_repeat 2 65 0 5 1244 549 314 41 29 chr15 86417376 86417730 -17077244 - L1M5 LINE L1 -872 5274 4917 5 1244 314 338 45 26 chr15 86417783 86417938 -17077036 - L1M5 LINE L1 -1335 4811 4654 5 1244 731 296 90 23 chr15 86417953 86418209 -17076765 + B4 SINE B4 2 274 -18 5 1244 252 0 0 0 chr15 86418246 86418274 -17076700 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1244 455 327 86 34 chr15 86418279 86418548 -17076426 - L1M5 LINE L1 -1496 4650 4368 5 1244 254 265 14 0 chr15 86418551 86418634 -17076340 - L1ME3 LINE L1 0 6164 6078 5 1244 435 274 47 39 chr15 86418902 86419031 -17075943 - B4A SINE B4 -162 130 1 5 1244 696 241 20 64 chr15 86419559 86419603 -17075371 - B3A SINE B2 0 198 161 5 1244 282 56 0 0 chr15 86419603 86419639 -17075335 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1244 696 241 20 64 chr15 86419639 86419798 -17075176 - B3A SINE B2 -38 160 4 5 1244 266 270 11 0 chr15 86419853 86419942 -17075032 - L1MC LINE L1 -2394 3752 3663 5 1244 326 269 75 99 chr15 86421829 86421990 -17072984 - RLTR14 LTR ERV1 0 382 226 5 1244 231 240 189 19 chr15 86421965 86422071 -17072903 - MER72B LTR ERV1 -27 741 618 5 1244 261 83 0 0 chr15 86422377 86422413 -17072561 + (CATA)n Simple_repeat Simple_repeat 3 38 0 5 1244 628 291 113 21 chr15 86422506 86422790 -17072184 - MLT2D LTR ERVL -72 342 33 5 1244 352 246 150 24 chr15 86423301 86423438 -17071536 + MLT1A0 LTR MaLR 218 408 0 5 1244 629 275 75 21 chr15 86424470 86424656 -17070318 + ID_B1 SINE B4 29 224 0 5 1244 199 79 26 26 chr15 86424656 86424695 -17070279 + (GGA)n Simple_repeat Simple_repeat 3 41 0 5 1244 403 305 59 13 chr15 86425292 86425445 -17069529 + MLT2F LTR ERVL 408 567 -96 5 1244 468 287 3 50 chr15 86425514 86425749 -17069225 + CT-rich Low_complexity Low_complexity 1 223 0 5 1244 276 309 0 14 chr15 86425845 86425914 -17069060 + ID SINE ID 8 75 -149 5 1244 336 356 73 0 chr15 86426170 86426375 -17068599 - L1MC4a LINE L1 -1995 5887 5668 5 1244 1147 193 110 17 chr15 86426458 86426748 -17068226 + MTD LTR MaLR 1 317 -102 5 1244 302 344 39 8 chr15 86427047 86427176 -17067798 + LTR33B LTR ERVL 369 501 -2 5 1244 413 282 151 40 chr15 86427416 86427667 -17067307 + B4 SINE B4 1 279 -13 5 1244 350 91 18 0 chr15 86427675 86427730 -17067244 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 1244 369 0 0 0 chr15 86428411 86428452 -17066522 + (TC)n Simple_repeat Simple_repeat 1 41 0 5 1244 1196 117 0 0 chr15 86428455 86428618 -17066356 - B2_Mm2 SINE B2 -31 164 2 5 1244 756 190 0 0 chr15 86429197 86429360 -17065614 + CT-rich Low_complexity Low_complexity 2 164 0 5 1244 796 266 40 10 chr15 86429543 86429744 -17065230 - B3 SINE B2 -6 210 4 5 1244 3349 48 2 2 chr15 86430237 86430637 -17064337 - MTB LTR MaLR 0 400 1 5 1244 180 0 0 0 chr15 86431216 86431236 -17063738 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 5 1244 1493 258 19 11 chr15 86432914 86433290 -17061684 - MTEa LTR MaLR 0 379 1 5 1244 311 312 67 43 chr15 86433512 86433676 -17061298 - MLT1C LTR MaLR -12 455 288 5 1244 384 22 0 0 chr15 86433693 86433738 -17061236 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1244 1558 217 86 0 chr15 86433801 86434138 -17060836 + MTEb LTR MaLR 7 372 -7 5 1244 206 77 51 0 chr15 86434294 86434333 -17060641 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 5 1244 26 30 0 0 chr15 86434370 86434403 -17060571 + AT_rich Low_complexity Low_complexity 1 33 0 5 1244 289 338 74 15 chr15 86434455 86434590 -17060384 - MT2A LTR ERVL -135 398 256 5 1244 3225 58 2 5 chr15 86434999 86435396 -17059578 + MTA_Mm LTR MaLR 1 396 0 5 1244 285 211 40 8 chr15 86437837 86437961 -17057013 + (TG)n Simple_repeat Simple_repeat 2 129 0 5 1244 567 194 22 22 chr15 86437967 86438146 -17056828 + (TATATG)n Simple_repeat Simple_repeat 1 179 0 5 1244 242 236 44 22 chr15 86438149 86438240 -17056734 + (TATG)n Simple_repeat Simple_repeat 2 94 0 5 1244 225 170 56 11 chr15 86438240 86438329 -17056645 + (TG)n Simple_repeat Simple_repeat 2 94 0 5 1244 3178 70 5 0 chr15 86442195 86442593 -17052381 + MTB LTR MaLR 1 400 0 5 1244 409 258 30 10 chr15 86442843 86442979 -17051995 + B1F2 SINE Alu 5 148 0 5 1244 674 136 0 8 chr15 86442979 86443098 -17051876 + (GGAA)n Simple_repeat Simple_repeat 2 119 0 5 1244 1066 238 206 6 chr15 86443441 86443762 -17051212 + MTD LTR MaLR 4 388 -31 5 1244 4290 65 2 0 chr15 86443780 86444317 -17050657 + L1_Mus1 LINE L1 6030 6567 0 5 1244 338 252 80 10 chr15 86444347 86444447 -17050527 - ID_B1 SINE B4 -37 187 81 6 1244 207 0 0 0 chr15 86444958 86444981 -17049993 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 6 1244 1117 90 0 0 chr15 86444981 86445119 -17049855 - B1_Mus1 SINE Alu -8 140 3 6 1244 432 0 0 0 chr15 86445121 86445169 -17049805 + (TA)n Simple_repeat Simple_repeat 2 49 0 6 1244 1087 52 66 0 chr15 86445169 86445305 -17049669 - B1_Mm SINE Alu -2 145 1 6 1244 508 252 104 0 chr15 86445494 86445629 -17049345 - B3A SINE B2 -16 182 34 6 1244 1115 245 20 40 chr15 86445615 86445917 -17049057 - RMER10A LTR ERVL -146 296 1 6 1244 347 291 70 16 chr15 86446038 86446167 -17048807 + MLT2C1 LTR ERVL 3 138 -259 6 1244 315 310 11 0 chr15 86446231 86446318 -17048656 + MLT2C1 LTR ERVL 414 501 -62 6 1244 195 42 0 0 chr15 86446394 86446418 -17048556 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6 1244 1063 103 32 0 chr15 86446419 86446574 -17048400 - B2_Mm2 SINE B2 -34 161 2 6 1244 405 192 23 0 chr15 86446687 86446817 -17048157 + (TG)n Simple_repeat Simple_repeat 2 134 0 6 1244 308 281 24 24 chr15 86446820 86446904 -17048070 - L1MEg LINE L1 -1032 5114 5031 6 1244 315 296 84 24 chr15 86447517 86447683 -17047291 - L1MEg LINE L1 -5437 805 630 6 1244 294 156 0 0 chr15 86447776 86447821 -17047153 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1244 689 166 35 12 chr15 86447821 86447992 -17046982 + (TATATG)n Simple_repeat Simple_repeat 4 178 0 6 1244 570 158 41 6 chr15 86448001 86448173 -17046801 + (TATG)n Simple_repeat Simple_repeat 1 178 0 6 1244 945 147 0 0 chr15 86448173 86448343 -17046631 + (TG)n Simple_repeat Simple_repeat 2 171 0 6 1244 416 293 13 91 chr15 86448473 86448627 -17046347 - B1F SINE Alu -1 148 7 6 1244 739 286 10 17 chr15 86448654 86448861 -17046113 - B3A SINE B2 -3 213 2 6 1244 233 277 69 0 chr15 86448863 86448964 -17046010 + L1MB7 LINE L1 5228 5335 -811 6 1244 338 222 78 0 chr15 86448978 86449068 -17045906 + B1F SINE Alu 38 134 -15 6 1244 953 153 4 16 chr15 86449129 86449381 -17045593 + GA-rich Low_complexity Low_complexity 1 248 0 6 1244 509 301 44 24 chr15 86449707 86449959 -17045015 + L1MB7 LINE L1 5744 6000 -184 6 1244 25 31 0 0 chr15 86450362 86450394 -17044580 + AT_rich Low_complexity Low_complexity 1 32 0 6 1244 497 311 95 14 chr15 86450895 86451117 -17043857 - Lx8 LINE L1 -220 7253 7014 6 1244 21 36 0 0 chr15 86451147 86451175 -17043799 + AT_rich Low_complexity Low_complexity 1 28 0 6 1244 1152 119 0 0 chr15 86451358 86451535 -17043439 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 6 1244 1210 90 25 46 chr15 86451549 86451746 -17043228 - B2_Mm2 SINE B2 -1 194 2 6 1244 414 100 0 0 chr15 86453156 86453216 -17041758 + (TCTCCC)n Simple_repeat Simple_repeat 2 61 0 6 1244 184 246 17 50 chr15 86453628 86453688 -17041286 + L3b LINE CR1 165 222 -260 6 1244 1980 119 0 108 chr15 86454101 86454470 -17040504 + ORR1A4 LTR MaLR 1 329 0 6 1244 2183 165 10 18 chr15 86455621 86456016 -17038958 - MTC LTR MaLR -24 397 6 6 1244 3932 37 0 0 chr15 86456351 86456811 -17038163 - L1Md_T LINE L1 0 6582 6123 6 1244 570 128 0 0 chr15 86457018 86457112 -17037862 + (TG)n Simple_repeat Simple_repeat 1 94 0 6 1244 795 246 114 10 chr15 86457136 86457329 -17037645 - B4 SINE B4 0 292 80 6 1244 36 19 0 19 chr15 86457330 86457369 -17037605 + AT_rich Low_complexity Low_complexity 1 39 0 6 1244 1214 61 0 0 chr15 86457369 86457516 -17037458 - B1_Mus2 SINE Alu 0 147 1 6 1244 36 19 0 19 chr15 86457516 86457530 -17037444 + AT_rich Low_complexity Low_complexity 1 14 0 6 1244 1043 101 68 45 chr15 86457548 86457724 -17037250 - B2_Mm2 SINE B2 -14 181 2 6 1244 416 205 24 24 chr15 86457732 86457817 -17037157 - B4 SINE B4 -206 86 2 6 1244 471 318 77 3 chr15 86458022 86458209 -17036765 - MER63B DNA AcHobo -1 435 270 6 1244 1393 232 77 12 chr15 86458264 86458600 -17036374 - MTD LTR MaLR -2 417 60 6 1244 6464 55 4 4 chr15 86458601 86459500 -17035474 - L1Md_F2 LINE L1 0 6582 5770 6 1244 382 128 11 103 chr15 86459750 86459812 -17035162 + RLTR15 LTR ERVK 1 61 -298 6 1244 2257 120 6 3 chr15 86459812 86460138 -17034836 + ORR1A2 LTR MaLR 1 327 0 6 1244 441 260 282 60 chr15 86460138 86460372 -17034602 + RLTR15 LTR ERVK 62 343 -16 6 1244 273 119 0 0 chr15 86461142 86461184 -17033790 + (TCCA)n Simple_repeat Simple_repeat 3 44 0 6 1244 261 338 68 14 chr15 86461185 86461332 -17033642 + MIR SINE MIR 99 253 -9 6 1244 1184 248 64 91 chr15 86462754 86463127 -17031847 - ORR1D2 LTR MaLR -5 365 3 6 1244 454 314 155 10 chr15 86463343 86463736 -17031238 - L1MEg LINE L1 -3356 2790 2341 6 1244 315 0 0 0 chr15 86464402 86464437 -17030537 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 1244 401 185 32 21 chr15 86464472 86464566 -17030408 + MTD LTR MaLR 3 97 -322 6 1244 415 178 109 7 chr15 86464617 86464764 -17030210 - Lx9 LINE L1 -2 7642 7481 6 1244 205 146 42 0 chr15 86464768 86464816 -17030158 + (TTATA)n Simple_repeat Simple_repeat 5 54 0 6 1244 705 219 48 19 chr15 86464829 86465038 -17029936 - Lx9 LINE L1 -131 7513 7299 6 1244 1692 188 54 0 chr15 86465038 86465336 -17029638 + MTD LTR MaLR 91 404 -15 6 1244 186 118 0 0 chr15 86465369 86465403 -17029571 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 6 1244 248 188 135 45 chr15 86465414 86465503 -17029471 - L1MEg LINE L1 -4606 1636 1540 6 1244 588 233 52 22 chr15 86465543 86465679 -17029295 - RSINE1 SINE B4 -23 142 3 6 1244 351 262 78 36 chr15 86465683 86465849 -17029125 - L1MEg LINE L1 -4680 1562 1390 6 1244 1115 197 19 9 chr15 86465872 86466082 -17028892 + B3 SINE B2 5 216 0 6 1244 312 239 0 0 chr15 86466334 86466401 -17028573 - L1MEg LINE L1 -5160 1082 1016 6 1244 450 296 165 87 chr15 86469023 86469393 -17025581 + MLT1D LTR MaLR 26 424 -81 6 1244 332 191 16 0 chr15 86469417 86469480 -17025494 - Lx8 LINE L1 -318 7155 7092 6 1244 225 239 27 40 chr15 86469637 86469711 -17025263 + CT-rich Low_complexity Low_complexity 2 74 0 6 1244 873 224 102 44 chr15 86470208 86470505 -17024469 - RLTR12B LTR ERVK -254 314 21 6 1244 557 208 6 0 chr15 86472587 86472765 -17022209 + (TG)n Simple_repeat Simple_repeat 2 180 0 6 1244 218 205 0 0 chr15 86472765 86472804 -17022170 + (TATG)n Simple_repeat Simple_repeat 1 39 0 6 1244 717 246 16 16 chr15 86472804 86472986 -17021988 - B3A SINE B2 -16 182 1 6 1244 222 257 55 41 chr15 86473032 86473105 -17021869 + MIRc SINE MIR 110 186 -82 6 1244 1653 206 85 10 chr15 86473339 86473726 -17021248 + MTD LTR MaLR 1 416 -3 6 1244 928 200 65 5 chr15 86476838 86477024 -17017950 - MTC LTR MaLR 0 421 225 6 1244 689 173 0 0 chr15 86477011 86477121 -17017853 - MTC LTR MaLR -311 110 1 6 1244 252 0 0 0 chr15 86477182 86477210 -17017764 + (TGGGGG)n Simple_repeat Simple_repeat 3 30 0 6 1244 292 279 105 49 chr15 86477857 86478019 -17016955 - MLT1C LTR MaLR -7 460 290 6 1244 198 275 0 0 chr15 86479047 86479116 -17015858 + C-rich Low_complexity Low_complexity 3 71 0 6 1244 337 302 41 54 chr15 86479313 86479460 -17015514 - B4 SINE B4 -147 145 1 6 1244 1032 323 42 37 chr15 86480666 86481281 -17013693 - L1MA7 LINE L1 -10 6983 6366 6 1244 472 238 71 0 chr15 86481302 86481428 -17013546 - RMER15 LTR ERVL 0 575 441 6 1244 412 217 71 79 chr15 86481521 86481661 -17013313 - RMER15 LTR ERVL -414 161 23 6 1244 27 0 0 0 chr15 86481683 86481710 -17013264 + AT_rich Low_complexity Low_complexity 1 27 0 6 1244 2551 255 115 12 chr15 86481719 86482520 -17012454 - Lx8 LINE L1 -29 7444 6562 6 1244 871 166 0 44 chr15 86482645 86482803 -17012171 - RMER10B LTR ERVL 0 398 248 6 1244 186 43 0 0 chr15 86482818 86482841 -17012133 + (GGAGAA)n Simple_repeat Simple_repeat 6 28 0 6 1244 837 282 54 92 chr15 86482859 86483590 -17011384 - L1MA7 LINE L1 -746 6247 5558 6 1244 666 269 0 0 chr15 86483599 86483729 -17011245 - RSINE1 SINE B4 -29 136 7 6 1244 964 295 90 8 chr15 86483797 86484265 -17010709 - L1MA7 LINE L1 -1332 5513 5008 6 1244 245 299 0 11 chr15 86484269 86484357 -17010617 - L1MA7 LINE L1 -3106 3739 3653 6 1244 440 300 119 98 chr15 86484357 86485261 -17009713 - L1MA7 LINE L1 -3309 3536 2603 6 1244 590 313 6 6 chr15 86485261 86485441 -17009533 - B3A SINE B2 -18 180 1 6 1244 311 277 99 110 chr15 86485441 86485553 -17009421 - L1MA7 LINE L1 -4248 2602 2491 6 1244 385 304 79 68 chr15 86485696 86486049 -17008925 - L1MA7 LINE L1 -4183 2666 2310 6 1244 411 21 0 0 chr15 86486172 86486220 -17008754 + (TC)n Simple_repeat Simple_repeat 1 48 0 6 1244 540 307 119 4 chr15 86486362 86486588 -17008386 + RLTR18B LTR ERVK 29 280 -232 6 1244 760 269 69 75 chr15 86486676 86486982 -17007992 + RLTR18B LTR ERVK 187 490 -22 6 1244 360 259 113 9 chr15 86487034 86487079 -17007895 + L1MA5 LINE L1 5678 5728 -119 6 1244 198 0 0 0 chr15 86487079 86487101 -17007873 + (TG)n Simple_repeat Simple_repeat 1 22 0 6 1244 360 256 115 9 chr15 86487101 86487233 -17007741 + L1MA5 LINE L1 5729 5926 -374 6 1244 599 227 65 32 chr15 86487317 86487472 -17007502 - RSINE1 SINE B4 -4 161 2 6 1244 683 344 116 77 chr15 86487499 86488763 -17006211 - L1MA7 LINE L1 -4965 1814 502 6 1244 1003 180 72 14 chr15 86488779 86488988 -17005986 - ID_B1 SINE B4 -2 222 2 6 1244 200 284 221 0 chr15 86489055 86489150 -17005824 - L2a LINE L2 -73 3353 3238 6 1244 847 256 75 4 chr15 86489418 86489646 -17005328 + B4A SINE B4 2 245 -47 6 1244 342 0 0 0 chr15 86489646 86489684 -17005290 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1244 252 0 0 0 chr15 86489684 86489711 -17005263 + (GA)n Simple_repeat Simple_repeat 2 29 0 6 1244 580 337 123 22 chr15 86489796 86490242 -17004732 - L1MEe LINE L1 -3030 3116 2626 6 1244 389 296 78 63 chr15 86490833 86491115 -17003859 - L1MEe LINE L1 -3704 2462 2121 6 1244 1151 231 176 3 chr15 86491115 86491427 -17003547 + ORR1D2 LTR MaLR 3 368 -2 6 1244 389 341 83 55 chr15 86491427 86491587 -17003387 - L1MEe LINE L1 -4046 2120 1959 6 1244 301 319 25 74 chr15 86491591 86491713 -17003261 - PB1D10 SINE Alu -1 116 1 6 1244 287 35 52 17 chr15 86491719 86491777 -17003197 + (TTTTG)n Simple_repeat Simple_repeat 2 61 0 6 1244 596 250 0 8 chr15 86491779 86491900 -17003074 - PB1D7 SINE Alu 0 120 1 6 1244 796 125 0 105 chr15 86491901 86491945 -17003029 + B2_Mm2 SINE B2 2 36 -159 6 1244 387 0 0 0 chr15 86491945 86491988 -17002986 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 6 1244 796 146 25 101 chr15 86491988 86492114 -17002860 + B2_Mm2 SINE B2 37 176 -40 6 1244 326 183 41 50 chr15 86492114 86492235 -17002739 + Lx9 LINE L1 7524 7643 -1 6 1244 21 36 0 0 chr15 86492538 86492566 -17002408 + AT_rich Low_complexity Low_complexity 1 28 0 6 1244 976 251 59 4 chr15 86492620 86492856 -17002118 + ORR1D2 LTR MaLR 2 250 -120 6 1244 968 202 10 10 chr15 86492838 86493033 -17001941 + MTC LTR MaLR 5 199 -222 6 1244 885 53 0 35 chr15 86493027 86493143 -17001831 - B2_Mm2 SINE B2 -82 113 2 6 1244 916 229 71 31 chr15 86493144 86493369 -17001605 + MTC LTR MaLR 185 418 -1 6 1244 308 302 69 0 chr15 86493378 86493494 -17001480 + ORR1D2 LTR MaLR 241 364 -6 6 1244 327 287 52 21 chr15 86493529 86493625 -17001349 - L1MEe LINE L1 -4427 1739 1641 6 1244 734 125 0 27 chr15 86493909 86494057 -17000917 + CT-rich Low_complexity Low_complexity 2 145 0 7 1244 1633 222 54 22 chr15 86494149 86494555 -17000419 + MTD LTR MaLR 1 419 0 7 1244 547 290 53 43 chr15 86495298 86495507 -16999467 - ORR1E LTR MaLR -21 338 128 7 1244 1373 24 20 0 chr15 86495518 86495774 -16999200 + (TCTA)n Simple_repeat Simple_repeat 1 261 0 7 1244 231 208 42 0 chr15 86496271 86496343 -16998631 + A-rich Low_complexity Low_complexity 3 77 0 7 1244 202 81 46 46 chr15 86496385 86496450 -16998524 + T-rich Low_complexity Low_complexity 3 67 0 7 1244 299 308 93 35 chr15 86496717 86496964 -16998010 - MTEb LTR MaLR 0 379 94 7 1244 567 283 100 114 chr15 86496988 86497339 -16997635 - ORR1E LTR MaLR -12 347 2 7 1244 612 106 0 0 chr15 86497889 86497983 -16996991 + (TG)n Simple_repeat Simple_repeat 1 94 0 7 1244 455 90 0 13 chr15 86497983 86498062 -16996912 + (GA)n Simple_repeat Simple_repeat 1 78 0 7 1244 398 309 60 33 chr15 86498150 86498334 -16996640 - MLT2D LTR ERVL -214 200 12 7 1244 1882 30 55 0 chr15 86500244 86500479 -16994495 + L1Md_F2 LINE L1 5339 5586 -297 1 1244 8056 35 1 3 chr15 86500479 86501477 -16993497 + L1Md_F2 LINE L1 5587 6582 0 1 1244 830 238 70 0 chr15 86501484 86501669 -16993305 + B4 SINE B4 39 236 -56 2 1244 368 40 0 20 chr15 86501674 86501725 -16993249 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 3 1244 279 253 0 33 chr15 86501726 86501816 -16993158 + (TTTA)n Simple_repeat Simple_repeat 4 90 0 4 1244 317 337 51 97 chr15 86502359 86502576 -16992398 - L2 LINE L2 -2666 753 547 5 1244 492 18 0 0 chr15 86502923 86502980 -16991994 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1244 552 241 53 11 chr15 86504363 86504571 -16990403 - MLT1A1 LTR MaLR -9 399 137 7 1244 1802 222 126 7 chr15 86504615 86505068 -16989906 + Lx2B LINE L1 6494 7000 0 8 1244 1027 194 63 51 chr15 86505506 86506020 -16988954 - RMER17C LTR ERVK -1 409 1 9 1244 1042 287 81 31 chr15 86506211 86506596 -16988378 + MTD LTR MaLR 1 404 -15 1 1244 526 252 27 0 chr15 86506598 86506709 -16988265 + B3 SINE B2 3 116 -100 1 1244 1751 118 96 91 chr15 86506752 86507115 -16987859 - ORR1B2 LTR MaLR 0 367 3 1 1245 825 260 88 68 chr15 86507611 86508065 -16986909 - L1MEc LINE L1 -5333 1067 605 1 1245 432 0 0 0 chr15 86508439 86508487 -16986487 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1245 193 282 46 47 chr15 86508585 86508695 -16986279 + MIRc SINE MIR 47 159 -109 1 1245 1988 205 42 15 chr15 86509124 86509534 -16985440 - Lx5 LINE L1 0 7050 6630 1 1245 207 279 0 0 chr15 86510346 86510389 -16984585 + polypyrimidine Low_complexity Low_complexity 5 47 0 1 1245 524 248 25 0 chr15 86510554 86510675 -16984299 + RSINE1 SINE B4 25 148 -17 1 1245 537 16 0 0 chr15 86510719 86510781 -16984193 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 1245 487 315 68 21 chr15 86512144 86512381 -16982593 - MER74B LTR ERVL -316 306 59 2 1245 4349 48 5 7 chr15 86514563 86515127 -16979847 + L1Md_F2 LINE L1 6018 6580 -2 2 1245 359 341 80 19 chr15 86515482 86515694 -16979280 + Lx8 LINE L1 7024 7248 -225 2 1245 495 73 0 0 chr15 86515769 86515837 -16979137 + (TC)n Simple_repeat Simple_repeat 2 69 0 2 1245 944 231 62 121 chr15 86516339 86516728 -16978246 + RMER20B LTR ERVK 234 599 -28 2 1245 279 297 49 43 chr15 86516940 86517102 -16977872 + MLT1D LTR MaLR 40 202 -303 2 1245 2241 122 11 30 chr15 86517122 86517494 -16977480 + ORR1B1 LTR MaLR 1 365 -29 2 1245 402 21 0 0 chr15 86518082 86518129 -16976845 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1245 250 200 12 37 chr15 86518173 86518248 -16976726 - MIRc SINE MIR -42 166 95 2 1245 411 306 58 132 chr15 86519465 86519860 -16975114 - MLT1B LTR MaLR -20 370 5 2 1245 251 339 59 34 chr15 86520661 86520706 -16974268 + MLT1H1 LTR MaLR 4 46 -509 3 1245 2223 153 2 38 chr15 86520706 86521127 -16973847 + MTB_Mm LTR MaLR 1 406 -1 3 1245 251 339 59 34 chr15 86521127 86521200 -16973774 + MLT1H1 LTR MaLR 47 125 -430 3 1245 184 233 107 27 chr15 86521366 86521441 -16973533 + L2 LINE L2 189 269 -3150 3 1245 225 159 0 0 chr15 86521596 86521640 -16973334 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 3 1245 432 0 0 0 chr15 86522099 86522147 -16972827 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1245 379 121 0 0 chr15 86523194 86523252 -16971722 + RMER10B LTR ERVL 341 398 0 3 1245 352 321 56 10 chr15 86523449 86523644 -16971330 + MLT1D LTR MaLR 19 222 -283 3 1245 291 308 22 82 chr15 86523791 86523856 -16971118 - MT2A LTR ERVL 0 533 477 3 1245 599 297 30 35 chr15 86523856 86524055 -16970919 + B3A SINE B2 1 198 0 3 1245 291 308 22 82 chr15 86524055 86524173 -16970801 - MT2A LTR ERVL -57 476 361 3 1245 244 277 128 0 chr15 86528034 86528128 -16966846 - ORR1E LTR MaLR -36 323 218 3 1245 297 348 145 4 chr15 86528816 86529044 -16965930 + MamRep137 DNA TcMar? 184 443 -1 4 1245 351 301 23 23 chr15 86529170 86529397 -16965577 + (CCAA)n Simple_repeat Simple_repeat 1 227 0 4 1245 358 322 12 0 chr15 86529367 86529610 -16965364 + (CTAA)n Simple_repeat Simple_repeat 1 245 0 4 1245 360 344 86 0 chr15 86529610 86529831 -16965143 - MLT1E LTR MaLR -406 247 8 4 1245 302 206 97 11 chr15 86531367 86531460 -16963514 + MamRep137 DNA TcMar? 1 101 -343 4 1245 647 221 0 6 chr15 86531487 86531651 -16963323 + (TA)n Simple_repeat Simple_repeat 1 163 0 4 1245 195 0 0 79 chr15 86533126 86533164 -16961810 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 4 1245 1177 27 0 26 chr15 86533164 86533316 -16961658 - B1_Mus1 SINE Alu 0 148 1 4 1245 207 0 0 0 chr15 86534568 86534591 -16960383 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 4 1245 1159 48 0 0 chr15 86534895 86535041 -16959933 - B1_Mus2 SINE Alu 0 147 2 4 1245 248 250 103 60 chr15 86535649 86536066 -16958908 - L1M3e LINE L1 -6250 780 346 5 1245 548 95 0 12 chr15 86536195 86536280 -16958694 + (TC)n Simple_repeat Simple_repeat 1 84 0 5 1245 312 137 0 0 chr15 86538897 86538948 -16956026 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1245 207 0 0 0 chr15 86539326 86539349 -16955625 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 5 1245 2264 110 3 0 chr15 86539819 86540145 -16954829 - ORR1A2 LTR MaLR 0 327 1 5 1245 561 286 32 26 chr15 86540200 86540390 -16954584 - ORR1E LTR MaLR -166 193 3 5 1245 1869 324 78 37 chr15 86540390 86541219 -16953755 - ORR1E-int LTR MaLR -51 1529 676 5 1245 897 89 0 0 chr15 86541219 86541365 -16953609 + (CA)n Simple_repeat Simple_repeat 1 146 0 5 1245 1869 324 78 37 chr15 86541365 86541442 -16953532 - ORR1E-int LTR MaLR -905 675 585 5 1245 787 226 88 44 chr15 86541554 86541758 -16953216 - B3 SINE B2 -3 213 1 5 1245 665 321 109 63 chr15 86541765 86542224 -16952750 - ORR1E-int LTR MaLR -1100 480 1 5 1245 277 265 12 12 chr15 86542292 86542376 -16952598 - ORR1E LTR MaLR -8 371 288 5 1245 527 321 70 29 chr15 86542468 86542712 -16952262 + MTE-int LTR MaLR 761 1014 -566 5 1245 21 0 0 0 chr15 86543286 86543307 -16951667 + AT_rich Low_complexity Low_complexity 1 21 0 5 1245 547 239 6 6 chr15 86543598 86543766 -16951208 + CT-rich Low_complexity Low_complexity 2 169 0 6 1245 1101 245 8 8 chr15 86543823 86544074 -16950900 - B4A SINE B4 -18 274 24 6 1245 949 158 10 40 chr15 86545068 86545266 -16949708 - B2_Mm2 SINE B2 -1 194 3 6 1245 699 234 6 40 chr15 86545277 86545310 -16949664 - B3 SINE B2 -1 215 189 6 1245 189 0 0 0 chr15 86545310 86545331 -16949643 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1245 699 234 6 40 chr15 86545331 86545471 -16949503 - B3 SINE B2 -28 188 48 6 1245 633 256 130 3 chr15 86545497 86545685 -16949289 - B3A SINE B2 0 216 1 6 1245 886 263 80 111 chr15 86546251 86546328 -16948646 - Lx8 LINE L1 -2 7471 7380 6 1245 1287 240 89 0 chr15 86546328 86546665 -16948309 + ORR1D2 LTR MaLR 1 367 -3 6 1245 886 263 80 111 chr15 86546665 86546985 -16947989 - Lx8 LINE L1 -94 7379 7087 6 1245 949 148 14 19 chr15 86547068 86547279 -16947695 + ORR1B1 LTR MaLR 169 386 -8 6 1245 740 258 86 26 chr15 86547308 86547575 -16947399 - MTEb LTR MaLR -96 283 1 6 1245 925 295 95 25 chr15 86547856 86548297 -16946677 - L1MB3 LINE L1 0 6183 5712 7 1245 183 395 16 0 chr15 86548453 86548577 -16946397 + L2a LINE L2 3299 3424 -2 7 1245 246 322 0 24 chr15 86549375 86549499 -16945475 + CT-rich Low_complexity Low_complexity 3 123 0 7 1245 427 332 38 19 chr15 86550175 86550302 -16944672 + MER33 DNA MER1_type 27 157 -167 7 1245 252 0 0 0 chr15 86550302 86550330 -16944644 + (TA)n Simple_repeat Simple_repeat 2 29 0 7 1245 427 332 38 19 chr15 86550330 86550411 -16944563 + MER33 DNA MER1_type 158 239 -85 7 1245 942 223 26 19 chr15 86550411 86550676 -16944298 + L1MA7 LINE L1 6020 6286 -5 7 1245 457 211 4 8 chr15 86551240 86551335 -16943639 - RSINE1 SINE B4 -69 96 1 7 1245 183 122 95 24 chr15 86552292 86552334 -16942640 - MIR SINE MIR -106 102 58 7 1245 185 209 0 85 chr15 86553688 86553735 -16941239 + MIRm SINE MIR 103 145 -131 7 1245 773 321 7 15 chr15 86554213 86554482 -16940492 - RLTR14-int LTR ERV1 -157 5160 4894 7 1245 309 333 21 14 chr15 86555587 86555730 -16939244 - RLTR14-int LTR ERV1 -1890 3427 3284 7 1245 2300 101 13 0 chr15 86556161 86556478 -16938496 + ORR1A4 LTR MaLR 1 321 -8 8 1245 412 306 26 75 chr15 86556481 86556707 -16938267 - RLTR14-int LTR ERV1 -2685 2632 2418 7 1245 402 248 37 0 chr15 86557816 86557925 -16937049 - RLTR14 LTR ERV1 -269 113 1 8 1245 299 259 228 26 chr15 86558005 86558382 -16936592 + L1MEf LINE L1 1276 1734 -4899 8 1245 246 247 123 0 chr15 86558394 86558467 -16936507 + PB1D10 SINE Alu 3 84 -33 8 1245 283 324 0 0 chr15 86558473 86558547 -16936427 + ID4_ SINE ID 7 80 -3 8 1245 329 329 96 18 chr15 86558624 86558853 -16936121 + L1MEf LINE L1 1791 2037 -4596 8 1245 273 57 0 0 chr15 86559282 86559317 -16935657 + (AGGGGG)n Simple_repeat Simple_repeat 1 35 0 8 1245 979 8 8 8 chr15 86559376 86559497 -16935477 + (TCTA)n Simple_repeat Simple_repeat 3 123 0 8 1245 2431 248 120 22 chr15 86559527 86560360 -16934614 - Lx8 LINE L1 -4 7469 6555 8 1245 654 287 44 85 chr15 86560362 86560766 -16934208 - Lx8 LINE L1 -322 7151 6737 8 1245 225 309 124 32 chr15 86560948 86561165 -16933809 + L1MEf LINE L1 4237 4473 -2064 8 1245 460 289 82 59 chr15 86561370 86561774 -16933200 + L1MEf LINE L1 4573 4985 -1552 8 1245 366 85 0 0 chr15 86561774 86561833 -16933141 + (CAA)n Simple_repeat Simple_repeat 1 59 0 8 1245 1111 315 104 13 chr15 86561841 86562372 -16932602 + Lx8 LINE L1 6867 7445 -28 9 1245 256 306 49 8 chr15 86563084 86563206 -16931768 + L1M3 LINE L1 5386 5512 -656 9 1245 233 203 56 28 chr15 86563465 86563536 -16931438 + L1MC1 LINE L1 5926 5998 -335 9 1245 401 319 131 57 chr15 86564412 86564748 -16930226 - MER31A LTR ERV1 -42 443 83 9 1245 394 349 187 0 chr15 86565604 86565802 -16929172 + ORR1E LTR MaLR 1 235 -124 9 1245 434 284 10 0 chr15 86566210 86566312 -16928662 + MLT1A0 LTR MaLR 255 357 -8 9 1245 517 337 76 76 chr15 86566701 86566833 -16928141 + MLT1C LTR MaLR 7 133 -334 9 1245 598 214 248 0 chr15 86566833 86566978 -16927996 + B3A SINE B2 2 182 -16 9 1245 517 337 76 76 chr15 86566978 86567279 -16927695 + MLT1C LTR MaLR 134 439 -28 9 1245 720 35 0 0 chr15 86567399 86567486 -16927488 + (GA)n Simple_repeat Simple_repeat 1 87 0 9 1245 473 221 244 19 chr15 86567487 86567661 -16927313 - MTE2a LTR MaLR 0 374 182 9 1245 216 328 68 42 chr15 86568568 86568686 -16926288 - L2b LINE L2 -12 3363 3243 1 1245 366 307 0 17 chr15 86569383 86569499 -16925475 - MLT1H2 LTR MaLR -342 147 34 1 1245 437 197 145 116 chr15 86569792 86569930 -16925044 - ID_B1 SINE B4 -1 223 82 1 1245 459 35 0 0 chr15 86570357 86570414 -16924560 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1245 387 0 0 0 chr15 86570414 86570456 -16924518 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 1245 264 354 29 35 chr15 86570653 86570823 -16924151 - L1M2 LINE L1 -4222 2627 2459 1 1245 227 235 88 0 chr15 86570846 86570914 -16924060 + ID SINE ID 7 80 -144 1 1245 637 317 35 45 chr15 86573091 86573497 -16921477 - L1MD LINE L1 -405 5774 5374 1 1245 336 24 0 0 chr15 86573497 86573538 -16921436 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1245 237 98 0 0 chr15 86573549 86573590 -16921384 + (CAGAGA)n Simple_repeat Simple_repeat 4 44 0 1 1245 225 231 149 107 chr15 86573630 86573663 -16921311 - B2_Mm2 SINE B2 -4 191 151 1 1245 252 86 0 0 chr15 86573663 86573698 -16921276 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1245 411 237 139 79 chr15 86573698 86573816 -16921158 - B3A SINE B2 -45 150 27 1 1245 231 375 43 40 chr15 86573858 86574161 -16920813 + L1M5 LINE L1 5445 5748 -431 1 1245 229 105 0 0 chr15 86574223 86574261 -16920713 - Lx8 LINE L1 -2 7471 7434 1 1245 315 274 88 9 chr15 86574361 86574475 -16920499 - HAL1-3A_ME LINE L1 -489 2369 2247 1 1245 834 149 8 22 chr15 86575224 86575492 -16919482 + GA-rich Low_complexity Low_complexity 1 263 0 1 1245 292 293 111 37 chr15 86575521 86575872 -16919102 + L1MEg LINE L1 849 1225 -5017 1 1245 722 257 52 65 chr15 86576219 86576448 -16918526 - MTEb LTR MaLR -7 372 147 1 1245 2325 127 51 10 chr15 86576462 86576852 -16918122 + MTC LTR MaLR 14 419 -2 1 1245 484 268 57 0 chr15 86576857 86576980 -16917994 - MTEb LTR MaLR -233 146 17 1 1245 998 240 15 5 chr15 86576998 86577199 -16917775 + B3 SINE B2 8 210 -6 1 1245 207 0 0 0 chr15 86577208 86577231 -16917743 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1245 930 235 28 75 chr15 86577424 86577746 -16917228 + Lx8 LINE L1 7152 7458 -15 1 1245 2243 119 24 16 chr15 86577750 86578127 -16916847 - Lx2 LINE L1 -2 6995 6616 1 1245 395 326 48 33 chr15 86578301 86578637 -16916337 + L1MEg LINE L1 3985 4325 -1821 1 1245 21 36 0 0 chr15 86579151 86579179 -16915795 + AT_rich Low_complexity Low_complexity 1 28 0 1 1245 265 286 161 21 chr15 86579182 86579275 -16915699 + B4A SINE B4 46 151 -141 1 1245 895 147 0 33 chr15 86579421 86579604 -16915370 + C-rich Low_complexity Low_complexity 1 177 0 1 1245 1003 147 0 0 chr15 86579607 86579750 -16915224 - B1_Mur4 SINE Alu -5 145 3 1 1245 277 309 15 0 chr15 86580053 86580121 -16914853 - ID_B1 SINE B4 -4 220 152 1 1245 4552 157 77 9 chr15 86580269 86581074 -16913900 - RMER13A LTR ERVK 0 860 1 1 1245 331 204 0 0 chr15 86581589 86581643 -16913331 + tRNA-Val-GTG tRNA tRNA 20 73 -3 1 1245 704 161 23 0 chr15 86582539 86582669 -16912305 - URR1B DNA MER1_type 0 225 93 1 1245 2144 53 0 0 chr15 86582669 86582933 -16912041 - L1_Mus3 LINE L1 -574 6064 5801 1 1245 461 236 118 28 chr15 86582933 86582984 -16911990 - URR1B DNA MER1_type -69 156 106 1 1245 3961 83 32 0 chr15 86582984 86583515 -16911459 + L1_Mus3 LINE L1 6078 6625 -13 1 1245 461 236 118 28 chr15 86583515 86583607 -16911367 - URR1B DNA MER1_type -120 105 1 1 1245 963 19 44 52 chr15 86583827 86584098 -16910876 + (TCTG)n Simple_repeat Simple_repeat 1 268 0 1 1245 795 139 0 0 chr15 86584117 86584297 -16910677 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 1245 461 305 96 37 chr15 86584793 86585147 -16909827 - L1MB3 LINE L1 -5 6178 5804 1 1245 1001 113 6 0 chr15 86585170 86585338 -16909636 + (TCCA)n Simple_repeat Simple_repeat 4 172 0 1 1245 861 199 0 108 chr15 86585632 86585846 -16909128 - B3A SINE B2 -7 191 1 1 1245 290 227 124 11 chr15 86587112 86587201 -16907773 + MLT1A0 LTR MaLR 6 104 -261 1 1245 920 169 27 0 chr15 86587195 86587343 -16907631 - RLTR20B2 LTR ERVK -133 427 276 1 1245 438 291 47 58 chr15 86587359 86587549 -16907425 + MLT1A0 LTR MaLR 127 314 -51 1 1245 206 312 27 27 chr15 86587564 86587712 -16907262 + (CATA)n Simple_repeat Simple_repeat 4 151 0 1 1245 369 62 0 0 chr15 86587786 86587834 -16907140 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1245 2699 168 85 2 chr15 86587837 86587921 -16907053 - RLTR20B2 LTR ERVK 0 560 467 1 1245 432 0 0 0 chr15 86587921 86587969 -16907005 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1245 2699 168 85 2 chr15 86587969 86588217 -16906757 - RLTR20B2 LTR ERVK -94 466 200 1 1245 207 0 0 0 chr15 86588217 86588240 -16906734 + (TC)n Simple_repeat Simple_repeat 1 23 0 1 1245 2699 168 85 2 chr15 86588240 86588413 -16906561 - RLTR20B2 LTR ERVK -361 199 14 1 1245 390 234 22 74 chr15 86588469 86588593 -16906381 + PB1 SINE Alu 1 120 0 1 1245 240 357 69 15 chr15 86590169 86590300 -16904674 - MIRc SINE MIR -67 201 64 1 1245 12504 40 1 0 chr15 86590378 86592611 -16902363 - L1Md_F2 LINE L1 0 6582 4378 1 1245 830 125 69 33 chr15 86592613 86592888 -16902086 + (CAGCC)n Simple_repeat Simple_repeat 1 285 0 1 1245 1461 232 71 0 chr15 86593358 86593711 -16901263 - MTE2b LTR MaLR 0 379 2 1 1245 356 324 18 8 chr15 86593736 86593915 -16901059 + MLT1A0 LTR MaLR 279 467 0 1 1245 660 156 39 26 chr15 86595091 86595401 -16899573 + (TCTA)n Simple_repeat Simple_repeat 1 314 0 1 1245 186 189 0 0 chr15 86595411 86595448 -16899526 + (CAT)n Simple_repeat Simple_repeat 1 37 0 1 1245 1299 219 143 3 chr15 86595465 86595786 -16899188 - ORR1D2 LTR MaLR 0 370 5 1 1245 587 87 39 0 chr15 86595875 86595979 -16898995 + (TCTA)n Simple_repeat Simple_repeat 3 110 0 1 1245 275 280 164 18 chr15 86596237 86596408 -16898566 + Lx8 LINE L1 7272 7467 -6 1 1245 478 273 76 25 chr15 86596685 86596711 -16898263 - ORR1D1 LTR MaLR -189 170 148 1 1245 390 21 0 0 chr15 86596711 86596758 -16898216 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 1245 759 166 3 1 chr15 86596758 86596893 -16898081 - ORR1D1 LTR MaLR -212 147 1 1 1245 245 264 27 14 chr15 86596893 86596966 -16898008 - L1MC4 LINE L1 -151 7891 7818 1 1245 308 281 0 0 chr15 86597151 86597233 -16897741 - L1MC4 LINE L1 -498 7544 7463 1 1245 419 299 99 28 chr15 86597329 86597542 -16897432 - L1MC4 LINE L1 -747 7295 7068 1 1245 361 316 15 0 chr15 86597545 86597678 -16897296 + (TCTA)n Simple_repeat Simple_repeat 1 135 0 1 1245 515 225 7 0 chr15 86597693 86597831 -16897143 + (TCCA)n Simple_repeat Simple_repeat 3 141 0 1 1245 252 253 0 0 chr15 86597869 86597944 -16897030 + (TCCA)n Simple_repeat Simple_repeat 1 75 0 1 1245 378 328 163 16 chr15 86598011 86598330 -16896644 - L1MC4 LINE L1 -973 7069 6704 1 1245 399 41 0 0 chr15 86598594 86598643 -16896331 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 1245 672 164 11 22 chr15 86599426 86599607 -16895367 + GA-rich Low_complexity Low_complexity 2 180 0 1 1245 287 154 15 0 chr15 86600060 86600125 -16894849 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 1245 216 255 0 0 chr15 86600246 86600293 -16894681 + B4A SINE B4 3 49 -243 1 1245 543 314 53 34 chr15 86600361 86600569 -16894405 + B4A SINE B4 66 277 -15 1 1245 205 227 7 50 chr15 86601366 86601505 -16893469 + (TCCA)n Simple_repeat Simple_repeat 1 133 0 1 1245 932 121 44 3 chr15 86601539 86601877 -16893097 + (TCCA)n Simple_repeat Simple_repeat 1 351 0 1 1245 3534 25 2 0 chr15 86605477 86605872 -16889102 - MTA_Mm LTR MaLR 0 396 1 1 1245 537 289 13 20 chr15 86606029 86606181 -16888793 - B3A SINE B2 -43 155 5 1 1245 453 19 0 0 chr15 86606360 86606414 -16888560 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 1245 316 344 32 32 chr15 86606573 86606729 -16888245 - MLT1K LTR MaLR -339 256 101 1 1245 336 333 40 52 chr15 86606994 86607168 -16887806 - MIRb SINE MIR -25 243 72 1 1245 763 224 40 18 chr15 86607200 86607413 -16887561 + RLTR11A2 LTR ERVK 1 184 -343 1 1245 836 122 99 47 chr15 86609275 86609447 -16885527 - URR1A DNA MER1_type 0 226 46 1 1245 719 210 64 35 chr15 86610196 86610398 -16884576 + MTEb LTR MaLR 134 341 -38 1 1245 606 293 58 41 chr15 86611004 86611246 -16883728 - B4A SINE B4 -42 250 5 1 1245 510 161 19 19 chr15 86612093 86612251 -16882723 + (TG)n Simple_repeat Simple_repeat 2 159 0 1 1245 2299 66 0 114 chr15 86612252 86612612 -16882362 - ORR1A2 LTR MaLR -8 319 1 1 1245 577 86 21 0 chr15 86612612 86612705 -16882269 + (TG)n Simple_repeat Simple_repeat 1 95 0 1 1245 360 0 0 0 chr15 86613132 86613172 -16881802 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1245 381 70 0 0 chr15 86613275 86613332 -16881642 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1245 542 241 14 14 chr15 86613334 86613473 -16881501 - B1F SINE Alu -6 143 5 1 1245 244 316 21 0 chr15 86613507 86613602 -16881372 - L1M2 LINE L1 -524 5776 5680 1 1245 629 126 14 36 chr15 86613752 86613892 -16881082 + GA-rich Low_complexity Low_complexity 5 141 0 1 1245 822 228 65 20 chr15 86613892 86614093 -16880881 + MTE2a LTR MaLR 170 379 0 1 1245 241 281 111 46 chr15 86614106 86614186 -16880788 - L1M2 LINE L1 -628 5663 5585 1 1245 2449 133 23 13 chr15 86614186 86614574 -16880400 - ORR1B1 LTR MaLR -2 392 1 1 1245 241 281 111 46 chr15 86614574 86614709 -16880265 - L1M2 LINE L1 -707 5584 5434 1 1245 2235 142 104 10 chr15 86614737 86615120 -16879854 - MTC LTR MaLR 0 421 3 1 1245 1379 237 63 3 chr15 86615167 86615514 -16879460 + ORR1D2 LTR MaLR 3 370 0 1 1245 370 253 0 25 chr15 86615522 86615603 -16879371 - ID4_ SINE ID 0 83 5 1 1245 336 276 142 9 chr15 86615624 86615730 -16879244 - B1F SINE Alu -7 142 23 1 1245 388 267 73 24 chr15 86615852 86615975 -16878999 + RSINE1 SINE B4 3 131 -34 1 1245 396 0 0 0 chr15 86615976 86616020 -16878954 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1245 356 260 49 20 chr15 86616247 86616349 -16878625 - MER21B LTR ERV1 -758 105 1 1 1245 1041 295 50 12 chr15 86618062 86618464 -16876510 - Lx8 LINE L1 -349 7124 6708 1 1245 449 314 110 22 chr15 86618640 86618959 -16876015 - L1MC1 LINE L1 -489 5844 5498 1 1245 186 43 0 0 chr15 86619535 86619558 -16875416 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1 1245 887 109 0 42 chr15 86619558 86619702 -16875272 - B1_Mus1 SINE Alu -10 138 1 1 1245 646 289 63 78 chr15 86620100 86620485 -16874489 - MTEb LTR MaLR -10 369 1 1 1245 250 317 0 0 chr15 86620823 86620883 -16874091 + (TCG)n Simple_repeat Simple_repeat 2 61 0 1 1245 753 290 109 62 chr15 86621177 86621515 -16873459 - ORR1E LTR MaLR -5 354 1 1 1245 306 0 0 0 chr15 86621832 86621866 -16873108 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1245 225 295 11 11 chr15 86621944 86622033 -16872941 + (TA)n Simple_repeat Simple_repeat 1 89 0 1 1245 1113 252 84 31 chr15 86622039 86622417 -16872557 + MTE2a LTR MaLR 3 377 -2 2 1245 626 267 41 7 chr15 86622532 86622679 -16872295 - B3 SINE B2 -10 206 55 2 1245 1089 81 0 0 chr15 86622680 86622829 -16872145 + (TTCTC)n Simple_repeat Simple_repeat 4 152 0 2 1245 707 210 0 0 chr15 86622833 86622952 -16872022 - B1_Mur4 SINE Alu -31 119 1 2 1245 241 276 0 54 chr15 86623480 86623591 -16871383 + CT-rich Low_complexity Low_complexity 4 108 0 2 1245 201 364 0 0 chr15 86623789 86623954 -16871020 + (CCCTA)n Simple_repeat Simple_repeat 1 165 0 2 1245 301 335 6 18 chr15 86624117 86624287 -16870687 + CT-rich Low_complexity Low_complexity 1 168 0 2 1245 256 368 86 4 chr15 86625717 86625949 -16869025 + L1MA8 LINE L1 5924 6174 -117 2 1245 365 247 31 0 chr15 86626304 86626401 -16868573 + L1MA7 LINE L1 6167 6266 -25 2 1245 3143 124 8 20 chr15 86626496 86626998 -16867976 + Lx3_Mus LINE L1 6513 7008 -1 2 1245 495 0 0 0 chr15 86627215 86627270 -16867704 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1245 343 0 43 0 chr15 86627749 86627796 -16867178 + (CAA)n Simple_repeat Simple_repeat 2 50 0 2 1245 187 297 162 0 chr15 86627980 86628054 -16866920 + L2a LINE L2 3293 3378 -48 2 1245 430 256 8 69 chr15 86629571 86629701 -16865273 + MTE2a LTR MaLR 136 257 -122 2 1245 1088 279 23 78 chr15 86629979 86630423 -16864551 + MTE2a LTR MaLR 3 395 -24 2 1245 216 262 22 101 chr15 86630425 86630514 -16864460 - ID4_ SINE ID 0 83 2 2 1245 260 321 112 21 chr15 86630517 86630660 -16864314 + Tigger5 DNA MER2_type 2201 2356 -50 2 1245 229 177 69 92 chr15 86630639 86630726 -16864248 + Tigger7 DNA MER2_type 2191 2275 -216 2 1245 225 335 22 120 chr15 86630823 86631006 -16863968 + MLT1C LTR MaLR 1 165 -302 2 1245 569 290 171 108 chr15 86631245 86631597 -16863377 - MLT1C LTR MaLR -16 374 1 2 1245 304 361 56 10 chr15 86631720 86631916 -16863058 + MT2A LTR ERVL 16 220 -313 2 1245 480 35 0 0 chr15 86633511 86633569 -16861405 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 1245 1449 130 4 35 chr15 86634521 86634752 -16860222 - URR1B DNA MER1_type 0 225 2 2 1245 261 271 104 56 chr15 86635208 86635333 -16859641 + MLT1D LTR MaLR 203 333 -172 2 1245 342 315 64 41 chr15 86635304 86635476 -16859498 + MLT1D LTR MaLR 213 388 -117 2 1246 543 128 0 0 chr15 86639937 86640023 -16854951 + (TG)n Simple_repeat Simple_repeat 1 86 0 2 1246 329 364 0 6 chr15 86640053 86640230 -16854744 + (TG)n Simple_repeat Simple_repeat 1 176 0 2 1246 218 328 15 22 chr15 86640173 86640310 -16854664 + (TATG)n Simple_repeat Simple_repeat 4 139 0 2 1246 482 299 33 66 chr15 86641261 86641472 -16853502 + B4A SINE B4 5 208 -84 2 1246 2698 68 61 71 chr15 86641603 86642014 -16852960 - MTB_Mm LTR MaLR 0 407 1 2 1246 982 223 164 12 chr15 86643060 86643383 -16851591 - ORR1D1 LTR MaLR 0 374 3 2 1246 243 115 27 0 chr15 86644547 86644589 -16850385 + MLT2D LTR ERVL 1 43 -421 2 1246 591 251 0 63 chr15 86644846 86645020 -16849954 + RSINE1 SINE B4 3 165 0 2 1246 313 350 105 22 chr15 86645110 86645338 -16849636 + L1MC4 LINE L1 1281 1527 -4688 2 1246 207 292 0 0 chr15 86645845 86645934 -16849040 + (TG)n Simple_repeat Simple_repeat 1 89 0 2 1246 361 216 33 75 chr15 86645956 86646076 -16848898 - L1MA7 LINE L1 -29 6262 6148 2 1246 372 133 0 0 chr15 86646183 86646243 -16848731 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 1246 346 304 116 66 chr15 86646330 86646677 -16848297 + L1MC4 LINE L1 2576 2939 -3275 2 1246 555 316 132 27 chr15 86646704 86646961 -16848013 + B4A SINE B4 5 288 -4 2 1246 396 59 0 0 chr15 86646971 86647022 -16847952 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1246 405 306 72 57 chr15 86647692 86647967 -16847007 + L1MC4 LINE L1 3780 4048 -2166 2 1246 585 308 28 37 chr15 86647976 86648192 -16846782 + MTE2b LTR MaLR 3 216 -163 2 1246 572 279 89 30 chr15 86648293 86648329 -16846645 + MTE2a LTR MaLR 164 194 -185 2 1246 276 30 0 0 chr15 86648329 86648362 -16846612 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 2 1246 572 279 89 30 chr15 86648362 86648528 -16846446 + MTE2a LTR MaLR 195 377 -2 2 1246 490 226 32 0 chr15 86648529 86648622 -16846352 - MTE2b LTR MaLR -259 120 25 2 1246 560 151 0 9 chr15 86648991 86649039 -16845935 + polypyrimidine Low_complexity Low_complexity 61 108 0 2 1246 1518 22 0 0 chr15 86649039 86649217 -16845757 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 2 1246 1311 50 0 16 chr15 86649219 86649402 -16845572 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2 1246 560 151 0 9 chr15 86649402 86649457 -16845517 + polypyrimidine Low_complexity Low_complexity 6 60 0 2 1246 387 270 178 17 chr15 86649892 86650324 -16844650 - L1M3 LINE L1 -528 5772 5242 2 1246 368 307 90 66 chr15 86650394 86650638 -16844336 + L1MD1 LINE L1 132 381 -6252 2 1246 507 289 144 15 chr15 86651327 86651738 -16843236 + L1MD1 LINE L1 1555 2018 -4615 2 1246 400 258 57 50 chr15 86651982 86652141 -16842833 + L1MD1 LINE L1 2063 2222 -4411 2 1246 555 16 0 0 chr15 86652247 86652311 -16842663 + (GA)n Simple_repeat Simple_repeat 2 65 0 2 1246 805 246 5 0 chr15 86652311 86652502 -16842472 - Lx7 LINE L1 -823 6873 6682 2 1246 993 289 110 8 chr15 86652480 86652863 -16842111 + Lx7 LINE L1 6941 7362 -334 2 1246 314 247 0 11 chr15 86653119 86653213 -16841761 + GA-rich Low_complexity Low_complexity 4 96 0 2 1246 1041 316 90 34 chr15 86653256 86653340 -16841634 + L1MD1 LINE L1 2555 2625 -3912 2 1246 1142 186 5 31 chr15 86653340 86653562 -16841412 + B3 SINE B2 1 216 0 2 1246 1041 316 90 34 chr15 86653562 86654389 -16840585 + L1MD1 LINE L1 2626 3517 -3020 2 1246 746 280 21 42 chr15 86654629 86654819 -16840155 - B4A SINE B4 0 292 107 2 1246 387 105 0 0 chr15 86654877 86654934 -16840040 + (TCC)n Simple_repeat Simple_repeat 1 57 0 2 1246 377 221 15 0 chr15 86654959 86655027 -16839947 - B4A SINE B4 -207 85 17 2 1246 3050 164 85 50 chr15 86655029 86655815 -16839159 + RLTR25A LTR ERVK 23 979 -124 2 1246 417 66 0 0 chr15 86655815 86655876 -16839098 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 1246 356 0 23 0 chr15 86655876 86655919 -16839055 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 1246 780 282 118 77 chr15 86655919 86656039 -16838935 + RLTR25A LTR ERVK 980 1101 -2 2 1246 657 303 101 51 chr15 86656089 86657050 -16837924 - L1MB2 LINE L1 -3 6559 5557 2 1246 427 341 106 66 chr15 86657060 86657455 -16837519 + L1MB2 LINE L1 5126 5536 -1001 2 1246 429 54 0 0 chr15 86657517 86657573 -16837401 + (TAAAA)n Simple_repeat Simple_repeat 5 60 0 2 1246 373 305 78 17 chr15 86657732 86657912 -16837062 + L1MD1 LINE L1 5796 5986 -647 2 1246 1106 152 141 5 chr15 86658175 86658373 -16836601 + URR1B DNA MER1_type 1 225 0 2 1246 310 337 107 35 chr15 86658626 86658887 -16836087 + L1MD1 LINE L1 6249 6528 -105 2 1246 432 175 0 0 chr15 86659545 86659642 -16835332 + (CA)n Simple_repeat Simple_repeat 2 98 0 2 1246 876 222 35 40 chr15 86660059 86660261 -16834713 + MTEb LTR MaLR 179 379 0 2 1246 320 145 35 24 chr15 86660626 86660711 -16834263 + GA-rich Low_complexity Low_complexity 3 88 0 2 1246 210 303 122 11 chr15 86661008 86661098 -16833876 + MIRb SINE MIR 61 160 -108 2 1246 426 53 0 0 chr15 86661497 86661554 -16833420 + (TATG)n Simple_repeat Simple_repeat 2 58 0 2 1246 215 179 23 45 chr15 86661571 86661659 -16833315 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 2 1246 1260 151 14 8 chr15 86661700 86662057 -16832917 + (TCTA)n Simple_repeat Simple_repeat 1 359 0 2 1246 605 249 17 28 chr15 86663222 86663400 -16831574 + HAL1-2a_MD LINE L1 2307 2482 -542 2 1246 339 276 51 17 chr15 86666038 86666156 -16828818 - HAL1-2a_MD LINE L1 -561 2463 2342 2 1246 228 67 0 0 chr15 86666987 86667017 -16827957 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1246 530 259 6 0 chr15 86667060 86667230 -16827744 + (CA)n Simple_repeat Simple_repeat 1 171 0 2 1246 1129 66 0 0 chr15 86667297 86667434 -16827540 - B1_Mus1 SINE Alu -10 138 2 2 1246 226 274 24 103 chr15 86667441 86667474 -16827500 - BC1_Mm scRNA scRNA -35 117 39 2 1246 349 212 0 86 chr15 86667474 86667526 -16827448 - B4 SINE B4 -206 86 41 2 1246 2571 130 15 7 chr15 86667526 86667930 -16827044 - MTB_Mm LTR MaLR 0 407 1 2 1246 226 274 24 103 chr15 86667930 86667970 -16827004 - BC1_Mm scRNA scRNA -114 38 2 2 1246 1792 213 54 0 chr15 86669562 86669933 -16825041 - MTD LTR MaLR -28 391 1 2 1246 195 42 0 0 chr15 86671185 86671209 -16823765 + (TCC)n Simple_repeat Simple_repeat 1 24 0 2 1246 594 289 0 38 chr15 86671629 86671787 -16823187 - B4 SINE B4 -3 289 138 2 1246 1167 233 75 4 chr15 86673107 86673374 -16821600 - ORR1D2 LTR MaLR -81 289 4 2 1246 956 282 28 32 chr15 86673386 86673639 -16821335 - B4 SINE B4 -30 262 11 2 1246 703 245 0 55 chr15 86675086 86675250 -16819724 + RSINE1 SINE B4 11 165 0 2 1246 201 224 0 0 chr15 86675250 86675308 -16819666 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1246 1080 278 3 17 chr15 86676007 86676303 -16818671 - B4A SINE B4 0 292 1 2 1246 405 174 114 23 chr15 86676310 86676398 -16818576 - B3A SINE B2 -102 96 1 2 1246 232 290 185 40 chr15 86676449 86676600 -16818374 - MER20 DNA MER1_type -25 194 22 2 1246 591 131 21 28 chr15 86676811 86676937 -16818037 + CT-rich Low_complexity Low_complexity 18 144 0 2 1246 1076 124 11 0 chr15 86676937 86677114 -16817860 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2 1246 591 131 21 28 chr15 86677114 86677129 -16817845 + polypyrimidine Low_complexity Low_complexity 5 17 0 2 1246 276 250 44 0 chr15 86677922 86677990 -16816984 - Lx8 LINE L1 -1571 5902 5832 2 1246 661 258 153 51 chr15 86678205 86678519 -16816455 - MTEa LTR MaLR -33 346 1 2 1246 1243 262 112 24 chr15 86678763 86679139 -16815835 - MTD LTR MaLR 0 419 11 2 1246 256 283 131 58 chr15 86681450 86681641 -16813333 - LTR33B LTR ERVL -33 470 266 2 1246 889 257 163 28 chr15 86683419 86683707 -16811267 - MTE2b LTR MaLR -14 365 39 2 1246 185 234 16 0 chr15 86683792 86683856 -16811118 + (CCCA)n Simple_repeat Simple_repeat 4 68 0 2 1246 441 264 13 9 chr15 86683883 86684119 -16810855 + (TCCA)n Simple_repeat Simple_repeat 1 236 0 2 1246 222 171 0 0 chr15 86684253 86684294 -16810680 + (CATA)n Simple_repeat Simple_repeat 4 44 0 2 1246 396 0 0 0 chr15 86684903 86684947 -16810027 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1246 868 304 21 28 chr15 86684953 86685241 -16809733 - B4A SINE B4 -2 290 5 2 1246 412 296 92 49 chr15 86686389 86686406 -16808568 - B1F2 SINE Alu -1 148 138 2 1246 581 27 13 0 chr15 86686406 86686481 -16808493 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 2 1246 412 296 92 49 chr15 86686481 86686605 -16808369 - B1F2 SINE Alu -12 137 1 2 1246 805 254 91 5 chr15 86686605 86686668 -16808306 - ID SINE ID -136 88 10 2 1246 355 310 25 17 chr15 86686694 86686812 -16808162 - MLT1A0 LTR MaLR -159 206 88 2 1246 6046 35 0 0 chr15 86686958 86687662 -16807312 - L1Md_A LINE L1 0 6582 5879 2 1246 344 0 0 0 chr15 86687662 86687699 -16807275 + L1Md_A LINE L1 5827 5863 -20 2 1246 944 251 84 97 chr15 86687699 86688082 -16806892 + MTE2a LTR MaLR 2 379 0 2 1246 232 206 14 81 chr15 86688143 86688217 -16806757 - BGLII_B LTR ERVK -118 323 255 3 1246 360 343 56 23 chr15 86689553 86689768 -16805206 - MLT1D LTR MaLR -140 365 144 3 1246 330 257 13 26 chr15 86690570 86690646 -16804328 - B4 SINE B4 0 292 218 3 1246 1326 252 35 3 chr15 86690675 86690958 -16804016 - RMER1C Other Other -647 695 404 3 1246 2939 192 45 67 chr15 86690955 86691598 -16803376 + RMER1C Other Other 699 1327 -15 3 1246 428 292 14 35 chr15 86691743 86691885 -16803089 + ID_B1 SINE B4 84 222 -2 3 1246 338 266 165 6 chr15 86692659 86692829 -16802145 - L1MB3 LINE L1 -17 6166 5970 3 1246 1682 242 217 11 chr15 86692996 86693532 -16801442 + RMER13A LTR ERVK 1 647 -213 3 1246 230 344 41 0 chr15 86693793 86693915 -16801059 - L1M4c LINE L1 -3754 2622 2496 3 1246 301 236 111 0 chr15 86693923 86693995 -16800979 + MT2A LTR ERVL 2 81 -452 3 1246 310 232 0 14 chr15 86693991 86694061 -16800913 - B3A SINE B2 -129 69 1 3 1246 1226 271 64 49 chr15 86694173 86694626 -16800348 - MT2A LTR ERVL -2 531 72 3 1246 253 278 116 111 chr15 86694527 86694717 -16800257 - MTA_Mm LTR MaLR -199 197 7 3 1246 416 294 90 38 chr15 86694973 86695029 -16799945 - L1M4c LINE L1 -5410 974 920 3 1246 1704 234 8 8 chr15 86695029 86695399 -16799575 - ORR1D2 LTR MaLR 0 370 1 3 1246 416 294 90 38 chr15 86695399 86695503 -16799471 - L1M4c LINE L1 -5465 919 818 3 1246 180 0 0 0 chr15 86695503 86695523 -16799451 + (ATG)n Simple_repeat Simple_repeat 3 22 0 3 1246 416 294 90 38 chr15 86695523 86695573 -16799401 - L1M4c LINE L1 -5567 817 752 3 1246 1303 108 16 0 chr15 86695619 86695804 -16799170 + B2_Mm2 SINE B2 1 188 -7 3 1246 327 362 87 6 chr15 86695828 86695989 -16798985 - L1M4c LINE L1 -5697 687 514 3 1246 684 284 78 0 chr15 86696145 86696363 -16798611 - L1M4c LINE L1 -6080 304 70 3 1246 249 233 0 55 chr15 86696530 86696621 -16798353 - L1MC LINE L1 -1543 4603 4518 3 1246 311 322 181 67 chr15 86696624 86697106 -16797868 - L1MEc LINE L1 -1643 4676 4140 3 1246 253 354 12 0 chr15 86697724 86697806 -16797168 - B1F SINE Alu -66 83 1 3 1246 794 203 33 20 chr15 86697859 86698041 -16796933 - B3 SINE B2 -2 193 4 3 1246 241 217 186 35 chr15 86698105 86698191 -16796783 - B4A SINE B4 -8 284 186 3 1246 387 337 58 21 chr15 86698259 86698447 -16796527 - L1MEc LINE L1 -3982 2418 2224 3 1246 267 140 0 0 chr15 86699207 86699257 -16795717 + (CATG)n Simple_repeat Simple_repeat 3 52 0 3 1246 630 295 57 34 chr15 86699291 86699554 -16795420 - B4A SINE B4 -23 269 1 3 1246 672 329 26 26 chr15 86699620 86699851 -16795123 - MTE2b LTR MaLR 0 379 149 3 1246 268 344 86 0 chr15 86700065 86700193 -16794781 - B1F1 SINE Alu -9 140 2 3 1246 426 20 0 0 chr15 86700393 86700444 -16794530 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1246 541 250 64 29 chr15 86700476 86700616 -16794358 - RSINE1 SINE B4 -18 147 3 3 1246 362 333 34 17 chr15 86700949 86701126 -16793848 - L1M5 LINE L1 -1200 4946 4767 3 1246 960 304 25 11 chr15 86701133 86701409 -16793565 + B4A SINE B4 9 288 -4 3 1246 6825 35 12 1 chr15 86701409 86702632 -16792342 - L1Md_F2 LINE L1 -195 6387 5146 3 1246 376 309 363 17 chr15 86702720 86702953 -16792021 + LTR69 LTR ERVL 1 314 -274 3 1246 1021 333 31 26 chr15 86702989 86703405 -16791569 + Tigger7 DNA MER2_type 30 447 -2044 3 1246 379 350 63 36 chr15 86703455 86703677 -16791297 + Tigger7 DNA MER2_type 2256 2482 -9 3 1246 348 24 0 0 chr15 86703997 86704038 -16790936 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1246 552 250 119 44 chr15 86704080 86704331 -16790643 - B4A SINE B4 -20 272 3 3 1246 228 67 0 0 chr15 86704532 86704562 -16790412 + (TC)n Simple_repeat Simple_repeat 1 30 0 3 1246 237 65 0 0 chr15 86705645 86705676 -16789298 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 3 1246 256 233 20 14 chr15 86705880 86706034 -16788940 + CT-rich Low_complexity Low_complexity 1 155 0 3 1246 495 308 11 23 chr15 86706604 86706780 -16788194 + C-rich Low_complexity Low_complexity 1 174 0 3 1246 468 0 0 0 chr15 86706796 86706848 -16788126 + (TCCC)n Simple_repeat Simple_repeat 1 52 0 3 1246 292 338 88 29 chr15 86706858 86706995 -16787979 - ID_B1 SINE B4 0 224 80 3 1246 236 233 233 0 chr15 86707221 86707307 -16787667 + RSINE1 SINE B4 3 108 -57 3 1246 387 0 0 0 chr15 86707332 86707375 -16787599 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1246 378 0 0 0 chr15 86707375 86707416 -16787558 + (GA)n Simple_repeat Simple_repeat 2 43 0 3 1246 205 222 0 0 chr15 86707804 86707840 -16787134 + MIRb SINE MIR 31 66 -202 3 1246 315 0 0 0 chr15 86707879 86707914 -16787060 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 1246 577 194 6 6 chr15 86707916 86708087 -16786887 + (CA)n Simple_repeat Simple_repeat 1 171 0 3 1246 832 325 17 38 chr15 86708245 86708454 -16786520 - B4A SINE B4 -10 282 76 3 1246 1301 239 72 14 chr15 86708454 86708802 -16786172 - ORR1D2 LTR MaLR -2 368 1 3 1246 832 325 17 38 chr15 86708802 86708880 -16786094 - B4A SINE B4 -217 75 1 3 1246 182 171 24 0 chr15 86709433 86709474 -16785500 + CT-rich Low_complexity Low_complexity 2 43 0 3 1246 1403 197 89 40 chr15 86709553 86709902 -16785072 - ORR1D2 LTR MaLR 0 370 5 3 1246 327 324 79 46 chr15 86711102 86711185 -16783789 + RMER15 LTR ERVL 375 467 -108 3 1246 1388 227 50 30 chr15 86711185 86711548 -16783426 - ORR1D2 LTR MaLR 0 370 1 3 1246 327 324 79 46 chr15 86711548 86711616 -16783358 + RMER15 LTR ERVL 468 531 -44 3 1246 363 26 78 13 chr15 86711618 86711695 -16783279 + (TTTG)n Simple_repeat Simple_repeat 3 84 0 3 1246 212 305 0 0 chr15 86712512 86712571 -16782403 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 1246 191 32 65 0 chr15 86713325 86713356 -16781618 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 3 1246 521 252 44 71 chr15 86713958 86714184 -16780790 - MER5C DNA MER1_type -50 263 44 3 1246 228 297 167 44 chr15 86714536 86714740 -16780234 - L1M4 LINE L1 -392 5786 5558 3 1246 496 170 9 9 chr15 86715104 86715159 -16779815 + polypyrimidine Low_complexity Low_complexity 53 108 0 3 1246 1148 107 0 11 chr15 86715159 86715339 -16779635 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 3 1246 496 170 9 9 chr15 86715339 86715390 -16779584 + polypyrimidine Low_complexity Low_complexity 2 52 0 3 1246 736 169 73 7 chr15 86715439 86715576 -16779398 - B1_Mus2 SINE Alu 0 147 2 3 1246 300 190 100 53 chr15 86715581 86715731 -16779243 - L1M4 LINE L1 -947 5199 5043 3 1246 252 238 0 0 chr15 86715790 86715853 -16779121 + (TG)n Simple_repeat Simple_repeat 1 63 0 3 1246 653 262 11 22 chr15 86715853 86716036 -16778938 - B3A SINE B2 -13 185 5 3 1246 311 301 152 14 chr15 86716387 86716525 -16778449 - B4A SINE B4 -10 282 126 3 1246 223 87 0 68 chr15 86716525 86716599 -16778375 + (TCTCTG)n Simple_repeat Simple_repeat 6 74 0 3 1246 466 254 123 0 chr15 86716599 86716721 -16778253 - B4A SINE B4 -150 142 6 3 1246 1133 47 41 6 chr15 86716733 86716903 -16778071 + (TATATG)n Simple_repeat Simple_repeat 4 179 0 3 1246 405 287 49 10 chr15 86716948 86717050 -16777924 - RSINE1 SINE B4 -58 107 2 3 1246 676 193 15 15 chr15 86717681 86717818 -16777156 - ID_B1 SINE B4 -1 223 87 3 1246 804 311 60 64 chr15 86717828 86718276 -16776698 + L1M5 LINE L1 2810 3260 -2886 3 1246 414 0 0 0 chr15 86718276 86718322 -16776652 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1246 804 311 60 64 chr15 86718322 86718544 -16776430 + L1M5 LINE L1 3261 3476 -2670 3 1246 1097 70 28 0 chr15 86719024 86719166 -16775808 - B1_Mus1 SINE Alu -2 146 1 3 1246 279 0 0 0 chr15 86719232 86719263 -16775711 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1246 2769 191 39 17 chr15 86719263 86719792 -16775182 - Lx5 LINE L1 -12 7038 6507 3 1246 258 276 60 20 chr15 86719945 86720045 -16774929 + L1M5 LINE L1 4500 4603 -1543 3 1246 574 291 92 80 chr15 86720176 86720665 -16774309 + L1M5 LINE L1 4739 5233 -913 3 1246 1036 242 4 73 chr15 86721307 86721566 -16773408 + ORR1D1 LTR MaLR 1 241 -133 3 1246 554 237 105 111 chr15 86721744 86721778 -16773196 - B2_Mm2 SINE B2 -6 189 159 3 1246 411 73 0 0 chr15 86721778 86721833 -16773141 + (TATG)n Simple_repeat Simple_repeat 4 58 0 3 1246 710 235 16 16 chr15 86721833 86721988 -16772986 - B3 SINE B2 -37 158 1 3 1246 1439 258 69 6 chr15 86722432 86722795 -16772179 + MTD LTR MaLR 18 403 -16 3 1246 340 330 153 11 chr15 86723140 86723330 -16771644 + LTR16B LTR ERVL 218 434 -29 3 1246 327 25 0 0 chr15 86724436 86724476 -16770498 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1246 1589 219 77 0 chr15 86724575 86724899 -16770075 + ORR1D2 LTR MaLR 22 370 0 3 1246 364 244 202 24 chr15 86725174 86725342 -16769632 + Tigger5 DNA MER2_type 1 198 -2208 3 1246 238 329 13 0 chr15 86725418 86725497 -16769477 + Tigger5 DNA MER2_type 2327 2406 0 3 1246 2244 141 27 45 chr15 86725794 86725952 -16769022 + ORR1B1 LTR MaLR 1 155 -239 3 1246 246 128 0 0 chr15 86725952 86725991 -16768983 + (CATA)n Simple_repeat Simple_repeat 2 40 0 3 1246 447 19 0 0 chr15 86725991 86726043 -16768931 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1246 2244 141 27 45 chr15 86726043 86726284 -16768690 + ORR1B1 LTR MaLR 156 393 -1 3 1246 387 0 0 0 chr15 86727264 86727307 -16767667 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1246 323 210 49 12 chr15 86728519 86728601 -16766373 + PB1D10 SINE Alu 14 98 -51 3 1246 322 309 0 0 chr15 86728628 86728696 -16766278 + ID4_ SINE ID 11 78 -5 3 1246 398 283 188 13 chr15 86728710 86728864 -16766110 + B3A SINE B2 2 182 -16 3 1246 342 0 0 0 chr15 86728875 86728913 -16766061 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1246 312 27 0 0 chr15 86729208 86729245 -16765729 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 1246 418 293 34 100 chr15 86729535 86729804 -16765170 - RMER15 LTR ERVL -13 562 312 3 1246 368 187 154 27 chr15 86729845 86729955 -16765019 - RMER15 LTR ERVL -451 124 1 3 1246 1634 171 77 22 chr15 86730953 86731276 -16763698 - RMER1A Other Other -27 1003 663 3 1246 447 183 0 0 chr15 86731343 86731414 -16763560 - RMER1A Other Other -375 655 585 3 1246 282 265 226 68 chr15 86731496 86731642 -16763332 - RMER15 LTR ERVL 0 575 407 3 1246 234 307 48 78 chr15 86731712 86731878 -16763096 - RMER15 LTR ERVL -414 161 1 3 1246 226 338 68 0 chr15 86732001 86732075 -16762899 + ORR1E LTR MaLR 42 120 -239 3 1246 3278 141 15 45 chr15 86732736 86733302 -16761672 + RLTR25A LTR ERVK 349 902 -126 3 1246 555 56 0 0 chr15 86733302 86733373 -16761601 + (GGGA)n Simple_repeat Simple_repeat 3 73 0 3 1246 888 293 84 97 chr15 86733373 86733495 -16761479 + RLTR25A LTR ERVK 903 1028 0 3 1246 424 247 11 15 chr15 86734860 86735139 -16759835 + CT-rich Low_complexity Low_complexity 1 277 0 3 1246 326 299 70 89 chr15 86735185 86735343 -16759631 - HAL1-3A_ME LINE L1 -420 2438 2284 3 1246 344 104 15 0 chr15 86735598 86735665 -16759309 + (CA)n Simple_repeat Simple_repeat 2 69 0 3 1246 754 152 11 0 chr15 86735678 86735855 -16759119 + (CA)n Simple_repeat Simple_repeat 2 180 0 3 1246 1108 78 0 22 chr15 86735874 86736058 -16758916 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1246 1096 88 7 14 chr15 86736090 86736379 -16758595 + (CA)n Simple_repeat Simple_repeat 1 286 0 3 1246 443 73 15 0 chr15 86736559 86736627 -16758347 + (TA)n Simple_repeat Simple_repeat 1 69 0 3 1246 180 0 0 0 chr15 86736627 86736646 -16758328 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 1246 348 64 0 0 chr15 86736646 86736692 -16758282 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1246 792 222 45 7 chr15 86736696 86736850 -16758124 - B3 SINE B2 -54 162 3 4 1246 26 0 0 0 chr15 86738479 86738505 -16756469 + AT_rich Low_complexity Low_complexity 1 26 0 4 1246 4176 58 12 2 chr15 86739255 86739770 -16755204 - Lx3_Mus LINE L1 -265 6744 6225 4 1246 2025 65 19 0 chr15 86739770 86740033 -16754941 + Lx3_Mus LINE L1 6742 7009 0 4 1246 191 32 0 61 chr15 86740415 86740448 -16754526 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1246 243 313 0 0 chr15 86741276 86741343 -16753631 + (CAT)n Simple_repeat Simple_repeat 3 69 0 4 1246 539 249 16 71 chr15 86741369 86741551 -16753423 + HAL1-2a_MD LINE L1 2335 2506 -518 4 1246 237 348 54 30 chr15 86741648 86741814 -16753160 + L2 LINE L2 2269 2438 -981 4 1246 273 213 0 16 chr15 86742543 86742605 -16752369 + B3A SINE B2 1 61 -137 4 1246 537 315 37 15 chr15 86742777 86742993 -16751981 + Lx7 LINE L1 6604 6996 -648 4 1246 544 302 69 17 chr15 86743005 86743180 -16751794 + B4A SINE B4 95 278 -14 4 1246 480 111 0 0 chr15 86743183 86743255 -16751719 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 1246 546 372 139 27 chr15 86743538 86744243 -16750731 + L1M5 LINE L1 2244 3027 -3119 4 1246 1281 274 3 3 chr15 86744290 86744597 -16750377 - Lx8 LINE L1 -838 6635 6329 4 1246 402 154 0 0 chr15 86744610 86744688 -16750286 + (TATATG)n Simple_repeat Simple_repeat 2 79 0 4 1246 900 119 0 0 chr15 86744689 86744866 -16750108 + (TA)n Simple_repeat Simple_repeat 2 178 0 4 1246 245 228 114 38 chr15 86744891 86744996 -16749978 + Lx8 LINE L1 7359 7471 -2 4 1246 333 344 70 66 chr15 86746256 86746483 -16748491 + MLT1E2 LTR MaLR 306 533 -94 4 1246 270 0 0 0 chr15 86746488 86746518 -16748456 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1246 923 256 5 5 chr15 86746685 86746893 -16748081 + ID_B1 SINE B4 3 210 -14 4 1246 204 83 56 0 chr15 86748719 86748755 -16746219 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 4 1246 441 191 6 17 chr15 86748888 86749069 -16745905 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 4 1246 1026 256 55 93 chr15 86749195 86749600 -16745374 + MTE2a LTR MaLR 17 419 0 4 1246 593 339 47 8 chr15 86749757 86750013 -16744961 - Tigger7 DNA MER2_type -1856 635 370 4 1246 398 350 7 35 chr15 86750096 86750238 -16744736 - Tigger7 DNA MER2_type -2326 165 28 4 1246 209 305 60 24 chr15 86750453 86750537 -16744437 + MIRm SINE MIR 77 163 -113 4 1246 832 266 123 67 chr15 86750805 86751164 -16743810 + MTE2b LTR MaLR 1 379 0 4 1246 1199 295 73 77 chr15 86751228 86751760 -16743214 + MTE2b-int LTR MaLR 1 530 -1050 4 1246 986 236 72 37 chr15 86751965 86752268 -16742706 - MTE2b LTR MaLR -12 407 55 4 1246 450 323 3 0 chr15 86752343 86752663 -16742311 + (TG)n Simple_repeat Simple_repeat 1 320 0 4 1246 299 339 0 0 chr15 86752717 86752835 -16742139 + (TG)n Simple_repeat Simple_repeat 2 119 0 4 1246 205 222 0 22 chr15 86752957 86753003 -16741971 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 4 1246 565 293 19 95 chr15 86754930 86755141 -16739833 + RMER30 DNA MER1_type 8 202 0 4 1246 326 343 28 11 chr15 86755997 86756177 -16738797 + L1MDa LINE L1 1777 1959 -4674 4 1246 698 292 62 82 chr15 86756185 86756525 -16738449 - MTEa LTR MaLR 0 379 47 4 1246 2939 138 29 15 chr15 86756569 86757046 -16737928 - Lx4A LINE L1 -2 7056 6573 4 1246 2378 114 17 9 chr15 86757046 86757376 -16737598 + Lx4A LINE L1 6235 6569 -489 4 1246 3503 33 2 0 chr15 86757376 86757771 -16737203 - MTA_Mm LTR MaLR 0 396 1 4 1246 2378 114 17 9 chr15 86757771 86757785 -16737189 + Lx4A LINE L1 6570 6582 -476 4 1246 534 340 118 50 chr15 86757922 86758415 -16736559 + L1MDa LINE L1 2031 2563 -4070 4 1246 333 0 0 0 chr15 86758415 86758452 -16736522 + (TC)n Simple_repeat Simple_repeat 2 38 0 4 1246 333 0 0 0 chr15 86758452 86758489 -16736485 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1246 534 340 118 50 chr15 86758489 86758570 -16736404 + L1MDa LINE L1 2564 2644 -3989 4 1246 441 0 0 0 chr15 86758598 86758647 -16736327 + (GA)n Simple_repeat Simple_repeat 1 49 0 4 1246 230 338 34 7 chr15 86758740 86758889 -16736085 + L1MDa LINE L1 2794 2946 -3591 4 1246 535 325 124 28 chr15 86758928 86759605 -16735369 + L1MD LINE L1 2783 3524 -2622 4 1246 329 310 9 17 chr15 86759737 86759852 -16735122 + GA-rich Low_complexity Low_complexity 2 115 0 4 1246 180 0 0 0 chr15 86759933 86759953 -16735021 + (CAT)n Simple_repeat Simple_repeat 2 21 0 4 1246 553 308 113 82 chr15 86760099 86760488 -16734486 + Lx8 LINE L1 7060 7460 -13 4 1246 303 294 117 12 chr15 86760500 86760662 -16734312 + L1MD LINE L1 4607 4785 -1361 4 1246 205 385 65 8 chr15 86763902 86764025 -16730949 - MIR SINE MIR -8 254 125 4 1246 321 302 142 19 chr15 86765284 86765446 -16729528 - MLT1C LTR MaLR 0 467 209 4 1246 8185 53 1 2 chr15 86765447 86766620 -16728354 - L1Md_F2 LINE L1 -12 6570 5399 4 1246 273 390 50 78 chr15 86766743 86766806 -16728168 - B4 SINE B4 0 292 238 4 1246 1565 248 34 22 chr15 86766806 86767214 -16727760 + MTD LTR MaLR 5 417 -2 4 1246 273 390 50 78 chr15 86767214 86767431 -16727543 - B4 SINE B4 -55 237 20 4 1246 455 369 43 18 chr15 86769267 86769430 -16725544 - MT2A LTR ERVL -71 462 296 4 1247 1284 89 0 0 chr15 86770442 86770622 -16724352 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 1247 298 129 32 0 chr15 86770623 86770685 -16724289 + GA-rich Low_complexity Low_complexity 3 66 0 4 1247 521 332 75 21 chr15 86770689 86770969 -16724005 - MT2A LTR ERVL -232 301 7 4 1247 468 0 0 0 chr15 86772862 86772914 -16722060 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1247 288 281 17 9 chr15 86773318 86773433 -16721541 + L1M5 LINE L1 3358 3473 -2673 4 1247 387 0 0 0 chr15 86773990 86774033 -16720941 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1247 836 237 59 48 chr15 86774040 86774310 -16720664 - B4A SINE B4 -19 273 1 4 1247 3633 173 74 48 chr15 86774492 86775276 -16719698 - RLTR40 LTR ERVK -5 812 9 4 1247 620 296 33 33 chr15 86775464 86775705 -16719269 + B4A SINE B4 6 246 -46 4 1247 351 0 0 0 chr15 86775715 86775754 -16719220 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1247 736 236 81 0 chr15 86775766 86775927 -16719047 - B3A SINE B2 -22 176 3 4 1247 327 258 0 88 chr15 86775964 86776066 -16718908 + B4A SINE B4 149 241 -51 4 1247 669 13 0 0 chr15 86776078 86776156 -16718818 + (TG)n Simple_repeat Simple_repeat 1 78 0 4 1247 419 253 0 53 chr15 86776216 86776543 -16718431 + (CA)n Simple_repeat Simple_repeat 1 309 0 4 1247 429 20 0 0 chr15 86776859 86776909 -16718065 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1247 727 225 7 0 chr15 86777431 86777582 -16717392 - MTD LTR MaLR -260 159 8 4 1247 1192 217 71 62 chr15 86778564 86778903 -16716071 - LTRIS5 LTR ERV1 0 447 106 4 1247 249 194 97 69 chr15 86778881 86778953 -16716021 - B1_Mus1 SINE Alu -55 93 20 4 1247 803 257 22 17 chr15 86779604 86779782 -16715192 - B3A SINE B2 -18 180 2 4 1247 2283 279 86 21 chr15 86779858 86780887 -16714087 + L1MC LINE L1 2427 3521 -2625 4 1247 570 29 0 0 chr15 86781610 86781678 -16713296 + (GA)n Simple_repeat Simple_repeat 2 69 0 4 1247 215 234 21 0 chr15 86782392 86782439 -16712535 + (CATG)n Simple_repeat Simple_repeat 3 50 0 4 1247 865 269 20 65 chr15 86782443 86782749 -16712225 - B4 SINE B4 0 292 1 4 1247 315 122 0 0 chr15 86782888 86782937 -16712037 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 4 1247 980 90 7 0 chr15 86784450 86784595 -16710379 + (TCTA)n Simple_repeat Simple_repeat 3 148 0 4 1247 720 273 92 5 chr15 86784595 86784779 -16710195 - B3 SINE B2 -14 202 3 4 1247 288 77 0 0 chr15 86785060 86785099 -16709875 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1247 759 42 0 0 chr15 86786043 86786138 -16708836 + (TTCA)n Simple_repeat Simple_repeat 1 95 0 4 1247 213 333 0 0 chr15 86786763 86786832 -16708142 - B3 SINE B2 -146 70 2 4 1247 1427 193 164 106 chr15 86787310 86787809 -16707165 + MT2A LTR ERVL 6 533 0 4 1247 344 276 0 0 chr15 86787995 86788071 -16706903 + MTE2b LTR MaLR 304 379 0 4 1247 930 85 0 0 chr15 86789045 86789174 -16705800 + (TCCC)n Simple_repeat Simple_repeat 4 132 0 4 1247 440 245 10 0 chr15 86791008 86791110 -16703864 + B1F2 SINE Alu 40 142 -7 4 1247 344 275 57 24 chr15 86792083 86792206 -16702768 - MER53 DNA hAT 0 193 67 4 1247 263 312 79 48 chr15 86792979 86793144 -16701830 + MLT1B LTR MaLR 6 175 -215 4 1247 845 236 111 25 chr15 86793257 86793500 -16701474 + ORR1D2 LTR MaLR 1 264 -106 4 1247 570 240 42 22 chr15 86793617 86793827 -16701147 + ORR1D2 LTR MaLR 164 374 0 4 1247 350 210 0 31 chr15 86794930 86795058 -16699916 + (TATATG)n Simple_repeat Simple_repeat 4 127 0 4 1247 1652 236 88 3 chr15 86795133 86795519 -16699455 + MTD LTR MaLR 1 419 0 4 1247 1224 41 0 7 chr15 86795686 86795833 -16699141 + B1_Mm SINE Alu 2 147 0 4 1247 212 0 0 35 chr15 86795837 86795866 -16699108 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1247 235 353 101 26 chr15 86795867 86796056 -16698918 - Lx8 LINE L1 -96 7377 7175 4 1247 307 293 98 49 chr15 86796052 86796174 -16698800 + Lx8 LINE L1 6912 7039 -434 4 1247 955 264 4 25 chr15 86796231 86796472 -16698502 - B4A SINE B4 -48 244 9 4 1247 1061 287 49 35 chr15 86796845 86797271 -16697703 + Lx8 LINE L1 6961 7392 -81 4 1247 3847 170 79 110 chr15 86797328 86798307 -16696667 + RMER1A Other Other 85 1341 -1 4 1247 589 129 17 0 chr15 86798310 86798426 -16696548 + (TA)n Simple_repeat Simple_repeat 1 118 0 4 1247 407 318 131 20 chr15 86798484 86798683 -16696291 - Tigger7 DNA MER2_type -2266 225 5 4 1247 1108 263 36 15 chr15 86798785 86799061 -16695913 - MTD LTR MaLR -21 398 131 4 1247 532 272 80 0 chr15 86799210 86799372 -16695602 - B4A SINE B4 -76 216 42 4 1247 354 311 26 20 chr15 86799500 86799651 -16695323 + MER53 DNA hAT 14 165 -28 4 1247 265 273 104 15 chr15 86799653 86799787 -16695187 + B1F SINE Alu 2 147 -2 4 1247 483 325 32 36 chr15 86799870 86800090 -16694884 + B4A SINE B4 12 230 -62 4 1247 564 81 0 0 chr15 86800091 86800178 -16694796 + (CA)n Simple_repeat Simple_repeat 1 87 0 5 1247 216 208 0 20 chr15 86800197 86800246 -16694728 + (CATA)n Simple_repeat Simple_repeat 3 50 0 5 1247 787 285 81 106 chr15 86801052 86801335 -16693639 + B4A SINE B4 9 284 -8 5 1247 446 138 37 30 chr15 86801353 86801487 -16693487 + (CATA)n Simple_repeat Simple_repeat 1 135 0 5 1247 650 183 12 12 chr15 86801502 86801668 -16693306 + (CA)n Simple_repeat Simple_repeat 1 166 0 5 1247 1154 233 86 42 chr15 86802586 86802922 -16692052 - ORR1E LTR MaLR -4 355 5 5 1247 184 307 78 12 chr15 86802939 86803041 -16691933 - MIRc SINE MIR -41 167 56 5 1247 207 0 0 0 chr15 86803294 86803317 -16691657 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 1247 1383 228 115 18 chr15 86803689 86804028 -16690946 + MTE2a LTR MaLR 1 372 -7 5 1247 265 196 0 152 chr15 86804400 86804466 -16690508 - L2b LINE L2 -16 3371 3308 5 1247 239 255 0 0 chr15 86804823 86804874 -16690100 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 5 1247 1096 210 10 5 chr15 86804952 86805158 -16689816 + B3 SINE B2 1 207 -9 5 1247 2617 159 2 19 chr15 86805512 86805940 -16689034 + MTC LTR MaLR 1 421 0 5 1247 225 0 0 0 chr15 86806282 86806307 -16688667 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 1247 807 320 47 22 chr15 86806921 86807196 -16687778 + B4A SINE B4 3 284 -8 5 1247 558 79 0 0 chr15 86807247 86807323 -16687651 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 5 1247 301 271 14 0 chr15 86808157 86808227 -16686747 + CT-rich Low_complexity Low_complexity 1 71 0 5 1247 857 258 42 18 chr15 86808647 86808852 -16686122 + B4 SINE B4 2 214 -78 5 1247 513 0 0 0 chr15 86808852 86808909 -16686065 + (CAAAC)n Simple_repeat Simple_repeat 3 59 0 5 1247 857 258 42 18 chr15 86808909 86808920 -16686054 + B4 SINE B4 215 223 -69 5 1247 378 384 34 38 chr15 86809116 86809354 -16685620 + Tigger5 DNA MER2_type 3 239 -2167 5 1247 311 288 184 0 chr15 86809868 86809993 -16684981 - MLT1D LTR MaLR -14 491 344 5 1247 1274 290 75 17 chr15 86810003 86810533 -16684441 + Lx8 LINE L1 6911 7471 -2 5 1247 600 310 18 50 chr15 86811091 86811373 -16683601 + B4A SINE B4 2 274 -18 5 1247 224 338 0 0 chr15 86811382 86811459 -16683515 + (CATA)n Simple_repeat Simple_repeat 4 80 0 5 1247 1261 260 43 46 chr15 86811594 86811965 -16683009 - ORR1D2 LTR MaLR 0 370 1 5 1247 291 220 27 18 chr15 86812211 86812322 -16682652 + A-rich Low_complexity Low_complexity 4 115 0 5 1247 846 147 0 0 chr15 86813054 86813197 -16681777 + (TA)n Simple_repeat Simple_repeat 1 143 0 5 1247 768 311 56 22 chr15 86813283 86813553 -16681421 + MTEa LTR MaLR 101 379 0 5 1247 1340 267 38 16 chr15 86813979 86814345 -16680629 - MTEa LTR MaLR -4 375 2 5 1247 441 185 0 0 chr15 86814388 86814469 -16680505 - ORR1D1 LTR MaLR -293 81 1 5 1247 318 252 13 11 chr15 86814501 86814595 -16680379 + L1MD LINE L1 5170 5273 -873 5 1247 835 254 34 10 chr15 86814632 86814839 -16680135 - B3 SINE B2 -4 212 1 5 1247 369 335 70 40 chr15 86814840 86815039 -16679935 + L1MD LINE L1 5276 5480 -762 5 1247 1334 211 89 45 chr15 86815841 86816199 -16678775 - ORR1D1 LTR MaLR 0 374 1 5 1247 1217 251 110 17 chr15 86816562 86816907 -16678067 - MTEb LTR MaLR 0 379 3 5 1247 198 143 0 0 chr15 86818519 86818554 -16676420 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 1247 273 89 0 0 chr15 86818988 86819033 -16675941 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 5 1247 1162 81 0 0 chr15 86819033 86819181 -16675793 - B1_Mus1 SINE Alu 0 148 1 5 1247 1672 193 77 16 chr15 86819242 86819606 -16675368 + MTD LTR MaLR 3 388 -31 5 1247 1190 100 0 6 chr15 86819627 86819808 -16675166 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 5 1247 287 350 153 9 chr15 86819855 86820077 -16674897 - MLT1D LTR MaLR 0 505 252 5 1247 238 118 0 0 chr15 86825357 86825391 -16669583 - RMER19C LTR ERVK -393 218 185 5 1247 3279 152 28 98 chr15 86827096 86827751 -16667223 - RMER19C LTR ERVK 0 611 3 5 1247 260 344 101 30 chr15 86828044 86828208 -16666766 + MLT1A0 LTR MaLR 24 199 -166 5 1247 459 179 13 0 chr15 86828208 86828286 -16666688 + B3A SINE B2 2 80 -118 5 1247 786 258 53 21 chr15 86828286 86828476 -16666498 + B3 SINE B2 21 216 0 5 1247 245 317 44 97 chr15 86828842 86829069 -16665905 - RMER17C LTR ERVK 0 410 196 5 1247 495 0 0 0 chr15 86829089 86829144 -16665830 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1247 275 227 223 18 chr15 86829449 86829561 -16665413 + HAL1 LINE L1 1507 1641 -866 5 1247 232 288 62 58 chr15 86829880 86830123 -16664851 + HAL1 LINE L1 2002 2245 -262 5 1247 853 243 127 95 chr15 86830196 86830542 -16664432 + ORR1E LTR MaLR 1 357 -2 5 1247 355 209 28 0 chr15 86830726 86830806 -16664168 - ID4 SINE ID -59 93 12 5 1247 599 314 113 26 chr15 86831135 86831451 -16663523 + MLT1A1 LTR MaLR 52 360 -48 5 1247 751 206 199 6 chr15 86831642 86831823 -16663151 - B3 SINE B2 0 216 1 5 1247 664 338 51 27 chr15 86831977 86832035 -16662939 - MLT1F2 LTR MaLR 0 560 502 5 1247 4922 46 3 0 chr15 86832035 86832620 -16662354 - L1Md_F2 LINE L1 -3 6579 5993 5 1247 664 338 51 27 chr15 86832620 86832935 -16662039 - MLT1F2 LTR MaLR -59 501 178 5 1247 802 243 82 10 chr15 86833283 86833491 -16661483 - Lx8 LINE L1 -381 7092 6870 5 1247 1392 229 77 21 chr15 86833981 86834359 -16660615 - MTD LTR MaLR 0 419 1 5 1247 1102 199 28 5 chr15 86836651 86836868 -16658106 + URR1A DNA MER1_type 5 226 0 5 1247 1104 248 72 80 chr15 86836943 86837316 -16657658 - ORR1D2 LTR MaLR 0 370 1 5 1247 3473 33 2 0 chr15 86838252 86838647 -16656327 + MTA_Mm LTR MaLR 1 396 0 5 1247 233 321 45 45 chr15 86838762 86838938 -16656036 - L1M5 LINE L1 -526 5636 5461 5 1247 3176 46 18 3 chr15 86839206 86839597 -16655377 + L1_Mus1 LINE L1 6171 6567 0 5 1247 1015 97 0 0 chr15 86839854 86839988 -16654986 + B1_Mus2 SINE Alu 2 135 -12 5 1247 216 0 0 0 chr15 86839988 86840012 -16654962 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 5 1247 316 295 60 43 chr15 86840069 86840186 -16654788 + B4 SINE B4 2 120 -172 5 1247 501 58 0 0 chr15 86840242 86840311 -16654663 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 1247 256 314 0 0 chr15 86840588 86840658 -16654316 - Lx7 LINE L1 -936 6760 6691 5 1247 282 143 0 0 chr15 86840715 86840764 -16654210 + (TCC)n Simple_repeat Simple_repeat 3 51 0 5 1247 203 138 0 0 chr15 86840765 86840794 -16654180 + (TTC)n Simple_repeat Simple_repeat 2 30 0 5 1247 1171 283 80 46 chr15 86840816 86841364 -16653610 + Lx8 LINE L1 6879 7445 -28 5 1247 243 243 46 46 chr15 86841555 86841663 -16653311 + L1MD LINE L1 4289 4396 -1750 5 1247 615 255 7 34 chr15 86841763 86841909 -16653065 - B3A SINE B2 -56 142 1 5 1247 319 287 117 40 chr15 86842109 86842356 -16652618 + L1MB5 LINE L1 4879 5144 -1002 5 1247 273 212 477 61 chr15 86842385 86842542 -16652432 + B4 SINE B4 1 223 -69 5 1247 207 365 7 0 chr15 86842618 86842755 -16652219 + (CA)n Simple_repeat Simple_repeat 1 138 0 5 1247 185 214 36 0 chr15 86842782 86842838 -16652136 + (TAAA)n Simple_repeat Simple_repeat 4 61 0 5 1247 539 244 50 14 chr15 86842863 86843080 -16651894 + L1MB5 LINE L1 5210 5441 -737 5 1247 366 308 116 0 chr15 86843216 86843362 -16651612 + RSINE1 SINE B4 3 165 0 5 1247 281 279 44 52 chr15 86843513 86843649 -16651325 - MLT1A1 LTR MaLR -6 402 268 5 1247 305 229 30 99 chr15 86843946 86844077 -16650897 + L1MB5 LINE L1 5874 5995 -184 5 1247 946 249 9 0 chr15 86844171 86844384 -16650590 + B3 SINE B2 2 216 0 5 1247 2459 169 11 28 chr15 86844815 86845278 -16649696 - Lx LINE L1 -4 6650 6196 5 1247 1619 141 16 10 chr15 86845270 86845560 -16649414 - Lx LINE L1 -595 6059 5769 5 1247 596 324 41 41 chr15 86845601 86845891 -16649083 - B4A SINE B4 -2 290 1 5 1247 307 316 167 36 chr15 86846679 86847008 -16647966 - L1MEf LINE L1 -4630 1570 1199 5 1247 216 111 0 0 chr15 86847040 86847076 -16647898 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1247 650 281 91 19 chr15 86847111 86847376 -16647598 - B4 SINE B4 -8 284 1 5 1247 461 245 275 0 chr15 86847946 86848135 -16646839 - B4A SINE B4 -4 288 48 5 1247 442 315 12 54 chr15 86849168 86849453 -16645521 - RMER15 LTR ERVL -115 460 68 5 1247 618 338 47 12 chr15 86849665 86850003 -16644971 - L1M5 LINE L1 -1390 4756 4407 5 1247 319 323 74 58 chr15 86850191 86850434 -16644540 - L1M5 LINE L1 -1945 4201 3955 5 1247 243 250 0 14 chr15 86850461 86850530 -16644444 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 1247 350 228 14 22 chr15 86850542 86850681 -16644293 + (TATG)n Simple_repeat Simple_repeat 4 141 0 5 1247 552 30 0 0 chr15 86850735 86850801 -16644173 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 5 1247 280 283 52 47 chr15 86851167 86851360 -16643614 - L1M5 LINE L1 -2645 3501 3308 5 1247 324 312 120 11 chr15 86851447 86851622 -16643352 - L1MC LINE L1 -2958 3188 2995 5 1247 1772 297 45 16 chr15 86851647 86852371 -16642603 + Lx9 LINE L1 6675 7502 -142 5 1247 396 0 0 0 chr15 86852747 86852791 -16642183 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1247 283 255 111 10 chr15 86852794 86852893 -16642081 - MLT1C LTR MaLR -76 391 283 5 1247 181 281 44 59 chr15 86855155 86855223 -16639751 - L3 LINE CR1 -3651 838 772 5 1247 1679 303 75 19 chr15 86855583 86856276 -16638698 + Lx8 LINE L1 6741 7472 -1 5 1247 256 280 0 0 chr15 86856577 86856652 -16638322 - L1MC3 LINE L1 -304 7481 7407 5 1247 7025 192 50 8 chr15 86858156 86859806 -16635168 + Lx5 LINE L1 5322 7046 -4 5 1247 827 246 63 153 chr15 86860552 86861000 -16633974 + MTD LTR MaLR 3 365 -14 5 1247 385 189 133 62 chr15 86861201 86861314 -16633660 + B1F SINE Alu 24 144 -5 5 1247 274 220 152 0 chr15 86861312 86861371 -16633603 + ID2 SINE ID 15 82 -1 5 1247 287 367 21 28 chr15 86861664 86861807 -16633167 + B1_Mus2 SINE Alu 1 142 -5 6 1247 1156 197 90 23 chr15 86861972 86862307 -16632667 - MTD LTR MaLR -10 409 25 6 1247 487 330 90 22 chr15 86862434 86862657 -16632317 - MLT1A0 LTR MaLR -1 364 127 6 1247 243 0 0 0 chr15 86863395 86863422 -16631552 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1247 719 183 31 9 chr15 86864823 86865280 -16629694 + (CA)n Simple_repeat Simple_repeat 1 467 0 6 1247 439 225 28 21 chr15 86865322 86865613 -16629361 + (CA)n Simple_repeat Simple_repeat 1 293 0 6 1247 271 281 17 11 chr15 86865638 86865823 -16629151 + (CA)n Simple_repeat Simple_repeat 1 186 0 6 1247 282 280 12 106 chr15 86866206 86866366 -16628608 + Charlie5 DNA MER1_type 9 153 -2471 6 1247 310 239 81 18 chr15 86866374 86866485 -16628489 - L1MA4 LINE L1 -46 6254 6137 6 1247 310 288 179 22 chr15 86867652 86868054 -16626920 + L1MEg LINE L1 861 1325 -4759 6 1247 198 0 0 0 chr15 86868406 86868428 -16626546 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 6 1247 35 92 0 0 chr15 86868841 86868939 -16626035 + AT_rich Low_complexity Low_complexity 1 98 0 6 1247 1526 126 11 61 chr15 86869084 86869364 -16625610 - RMER1B Other Other 0 1066 801 6 1247 1624 190 9 10 chr15 86869351 86869696 -16625278 - RMER1B Other Other -426 640 229 6 1247 235 343 54 40 chr15 86869759 86869908 -16625066 - MLT1A1 LTR MaLR -12 396 246 6 1247 310 325 11 5 chr15 86870265 86870393 -16624581 + L1M5 LINE L1 5698 5824 -338 6 1247 494 103 0 13 chr15 86870682 86870761 -16624213 + (TA)n Simple_repeat Simple_repeat 2 79 0 6 1247 337 175 0 0 chr15 86870793 86870850 -16624124 - HAL1-3A_ME LINE L1 -827 2031 1975 6 1247 258 176 0 0 chr15 86870852 86870903 -16624071 + (TA)n Simple_repeat Simple_repeat 1 51 0 6 1247 305 241 24 0 chr15 86871159 86871242 -16623732 + (TG)n Simple_repeat Simple_repeat 2 86 0 6 1247 435 223 13 7 chr15 86871584 86871733 -16623241 + (CA)n Simple_repeat Simple_repeat 1 150 0 6 1247 234 0 0 0 chr15 86871757 86871783 -16623191 + (CATG)n Simple_repeat Simple_repeat 3 28 0 6 1247 1282 213 118 51 chr15 86871881 86872076 -16622898 + MTD LTR MaLR 3 213 -206 6 1247 796 219 7 0 chr15 86872076 86872222 -16622752 + B1_Mus2 SINE Alu 1 147 0 6 1247 1282 213 118 51 chr15 86872222 86872417 -16622557 + MTD LTR MaLR 214 419 0 6 1247 227 224 118 0 chr15 86872630 86872706 -16622268 + L1M5 LINE L1 3861 3945 -2201 6 1247 254 81 0 0 chr15 86873145 86873182 -16621792 - URR1B DNA MER1_type -1 224 188 6 1247 227 122 122 0 chr15 86873189 86873230 -16621744 - URR1B DNA MER1_type -178 47 2 6 1247 31 44 0 0 chr15 86873642 86873687 -16621287 + AT_rich Low_complexity Low_complexity 1 45 0 6 1247 2419 95 6 21 chr15 86874948 86875280 -16619694 + ORR1A2 LTR MaLR 1 327 0 6 1247 510 297 54 7 chr15 86875845 86875994 -16618980 + RSINE1 SINE B4 2 157 -8 6 1247 798 208 0 14 chr15 86875998 86876144 -16618830 + B1_Mur4 SINE Alu 6 149 -1 6 1247 320 315 118 20 chr15 86876485 86876637 -16618337 + L1M5 LINE L1 2732 2898 -3248 6 1247 743 273 48 5 chr15 86876739 86876754 -16618220 - B3A SINE B2 0 198 182 6 1247 243 88 0 0 chr15 86876754 86876788 -16618186 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1247 743 273 48 5 chr15 86876788 86876960 -16618014 - B3A SINE B2 -17 181 4 6 1247 226 231 0 0 chr15 86877120 86877172 -16617802 + (CTAA)n Simple_repeat Simple_repeat 2 53 0 6 1247 992 226 58 5 chr15 86877197 86877356 -16617618 + B3 SINE B2 1 158 -58 6 1247 2400 93 19 0 chr15 86877356 86877677 -16617297 + ORR1A2 LTR MaLR 1 327 0 6 1247 992 226 58 5 chr15 86877677 86877722 -16617252 + B3 SINE B2 159 215 -1 6 1247 317 318 52 78 chr15 86878515 86878747 -16616227 + L1MEb LINE L1 725 950 -5120 6 1247 465 19 0 0 chr15 86878785 86878839 -16616135 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 6 1247 439 195 0 17 chr15 86879051 86879166 -16615808 + GA-rich Low_complexity Low_complexity 3 115 0 6 1247 1015 114 6 6 chr15 86879167 86879334 -16615640 + (GAA)n Simple_repeat Simple_repeat 3 169 0 6 1247 2062 133 3 6 chr15 86879337 86879648 -16615326 - RLTR10E LTR ERVK -1 310 1 6 1247 597 28 0 0 chr15 86879648 86879719 -16615255 + (GGA)n Simple_repeat Simple_repeat 2 72 0 6 1247 730 239 256 0 chr15 86880523 86880730 -16614244 + B4A SINE B4 15 274 -18 6 1247 450 0 0 0 chr15 86880739 86880789 -16614185 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1247 894 202 88 37 chr15 86881288 86881504 -16613470 - MTD LTR MaLR 0 419 193 6 1247 7856 29 0 2 chr15 86881510 86882405 -16612569 - L1Md_F2 LINE L1 -13 6569 5677 6 1247 798 219 25 35 chr15 86882405 86882608 -16612366 - MTD LTR MaLR -209 210 10 6 1247 629 332 33 83 chr15 86883227 86883529 -16611445 + B4 SINE B4 6 292 0 6 1247 403 232 162 56 chr15 86883675 86883835 -16611139 + B2_Mm2 SINE B2 2 178 -17 6 1247 863 208 71 5 chr15 86883857 86884055 -16610919 - B3 SINE B2 -2 214 4 6 1247 216 196 0 21 chr15 86884106 86884153 -16610821 + CT-rich Low_complexity Low_complexity 2 47 0 6 1247 437 294 16 16 chr15 86884166 86884287 -16610687 - PB1 SINE Alu 0 127 7 6 1247 304 217 75 11 chr15 86884644 86884737 -16610237 + L1M5 LINE L1 5696 5794 -650 6 1247 310 239 0 17 chr15 86885324 86885439 -16609535 + CT-rich Low_complexity Low_complexity 5 117 0 6 1247 1156 217 78 32 chr15 86888470 86888751 -16606223 + MTD LTR MaLR 63 356 -63 6 1247 896 287 56 8 chr15 86888721 86888988 -16605986 - MTD LTR MaLR -139 280 1 6 1247 522 295 155 55 chr15 86889548 86889946 -16605028 - MLT1F2 LTR MaLR -16 544 89 6 1247 216 0 0 0 chr15 86889946 86889970 -16605004 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1247 278 329 159 54 chr15 86889970 86890023 -16604951 - MLT1F2 LTR MaLR -460 88 32 6 1247 477 0 0 0 chr15 86890079 86890132 -16604842 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1247 860 119 14 76 chr15 86890132 86890277 -16604697 - B1_Mur3 SINE Alu -13 136 1 6 1247 403 279 0 54 chr15 86890455 86890584 -16604390 - B1F SINE Alu 0 149 28 6 1247 231 36 0 0 chr15 86890584 86890612 -16604362 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 6 1247 1949 156 6 35 chr15 86892183 86892522 -16602452 + ORR1B2 LTR MaLR 39 367 0 6 1247 411 125 0 0 chr15 86893995 86894067 -16600907 + (CA)n Simple_repeat Simple_repeat 2 73 0 6 1247 673 279 82 5 chr15 86894409 86894593 -16600381 - MTEa LTR MaLR -6 373 176 6 1247 221 136 76 0 chr15 86894594 86894660 -16600314 + (TA)n Simple_repeat Simple_repeat 2 72 0 6 1247 578 14 0 14 chr15 86894661 86894733 -16600241 + (TCTA)n Simple_repeat Simple_repeat 3 73 0 6 1247 679 253 80 0 chr15 86894759 86894909 -16600065 - MTEa LTR MaLR -217 162 1 6 1247 209 316 10 40 chr15 86895128 86895227 -16599747 + (TG)n Simple_repeat Simple_repeat 1 96 0 6 1247 278 293 80 50 chr15 86896935 86897136 -16597838 - Lx8 LINE L1 -18 7455 7249 6 1247 324 250 37 28 chr15 86897158 86897198 -16597776 + ID_B1 SINE B4 116 223 -1 6 1247 526 15 15 0 chr15 86897198 86897265 -16597709 + B1_Mus2 SINE Alu 80 147 0 6 1247 555 165 17 34 chr15 86897711 86897830 -16597144 + URR1A DNA MER1_type 78 194 -32 6 1247 724 175 11 11 chr15 86899291 86899470 -16595504 + (TATG)n Simple_repeat Simple_repeat 2 180 0 6 1247 234 260 0 0 chr15 86899467 86899540 -16595434 + (CATATA)n Simple_repeat Simple_repeat 3 75 0 6 1247 473 240 6 0 chr15 86899547 86899722 -16595252 + (TG)n Simple_repeat Simple_repeat 1 176 0 6 1247 537 288 198 16 chr15 86899730 86899977 -16594997 - B4A SINE B4 0 292 1 6 1247 370 354 33 19 chr15 86900050 86900260 -16594714 - ERVL-E-int LTR ERVL -4591 1076 864 6 1247 528 232 85 91 chr15 86900536 86900735 -16594239 + B3A SINE B2 1 198 0 6 1248 298 294 97 44 chr15 86901278 86901484 -16593490 - LTR33A LTR ERVL -2 518 302 6 1248 1607 186 118 3 chr15 86901944 86902273 -16592701 + ORR1B2 LTR MaLR 1 367 0 6 1248 449 122 141 39 chr15 86902822 86902950 -16592024 - L1MB7 LINE L1 -102 6082 5942 6 1248 527 205 14 19 chr15 86903049 86903263 -16591711 + CT-rich Low_complexity Low_complexity 1 212 0 6 1248 471 35 0 0 chr15 86904115 86904172 -16590802 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 1248 252 0 0 0 chr15 86904181 86904209 -16590765 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 1248 240 35 0 0 chr15 86904343 86904372 -16590602 + (CAGA)n Simple_repeat Simple_repeat 1 29 0 6 1248 218 279 103 11 chr15 86904840 86904969 -16590005 + MIRc SINE MIR 23 165 -111 6 1248 288 272 17 38 chr15 86905211 86905327 -16589647 - Lx9 LINE L1 -494 7150 6937 6 1248 1309 278 103 3 chr15 86905416 86905784 -16589190 - MTD LTR MaLR -14 405 1 6 1248 397 310 0 17 chr15 86906317 86906435 -16588539 - MTD LTR MaLR -255 164 49 6 1248 233 167 76 0 chr15 86906587 86906653 -16588321 + (ATATG)n Simple_repeat Simple_repeat 2 72 0 6 1248 2017 287 31 48 chr15 86906656 86907388 -16587586 - Lx7 LINE L1 -529 7167 6448 6 1248 793 143 95 0 chr15 86907772 86907919 -16587055 - URR1A DNA MER1_type 0 226 66 6 1248 292 284 15 0 chr15 86907980 86908047 -16586927 - ID4_ SINE ID -11 72 5 6 1248 274 308 135 0 chr15 86908473 86908577 -16586397 - MER74A LTR ERVL -424 134 17 6 1248 977 230 96 78 chr15 86908743 86909104 -16585870 - ORR1E LTR MaLR -4 375 4 6 1248 434 171 0 26 chr15 86910120 86910234 -16584740 + (ATGGTG)n Simple_repeat Simple_repeat 6 116 0 6 1248 225 284 179 0 chr15 86910240 86910307 -16584667 - ID4_ SINE ID -4 79 1 6 1248 980 213 94 0 chr15 86911544 86911746 -16583228 + ID_B1 SINE B4 2 222 -2 6 1248 506 306 5 117 chr15 86912479 86912675 -16582299 + B4A SINE B4 1 174 -118 6 1248 186 43 0 0 chr15 86912714 86912737 -16582237 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1248 3035 146 48 10 chr15 86912749 86913253 -16581721 - Lx4B LINE L1 -35 7023 6501 6 1248 236 354 36 54 chr15 86915743 86915964 -16579010 + MER31B LTR ERV1 99 315 -151 6 1248 795 75 0 0 chr15 86916238 86916345 -16578629 + (GGGAGA)n Simple_repeat Simple_repeat 3 109 0 6 1248 640 325 41 72 chr15 86916356 86916701 -16578273 + MLT1C LTR MaLR 23 356 -111 7 1248 363 78 0 0 chr15 86916858 86916909 -16578065 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1248 216 86 0 0 chr15 86916927 86916962 -16578012 + (CAGAGA)n Simple_repeat Simple_repeat 6 40 0 7 1248 1296 233 79 3 chr15 86917050 86917368 -16577606 - ORR1D1 LTR MaLR -2 372 31 7 1248 869 211 60 16 chr15 86918525 86918708 -16576266 - B3A SINE B2 -6 192 2 7 1248 298 278 24 73 chr15 86921013 86921065 -16573909 - MER3 DNA MER1_type -26 183 135 7 1248 493 274 93 61 chr15 86921065 86921279 -16573695 + ID_B1 SINE B4 2 222 -2 7 1248 298 278 24 73 chr15 86921279 86921291 -16573683 - MER3 DNA MER1_type -75 134 125 7 1248 360 0 0 0 chr15 86921291 86921331 -16573643 + (GA)n Simple_repeat Simple_repeat 1 40 0 7 1248 298 278 24 73 chr15 86921331 86921389 -16573585 - MER3 DNA MER1_type -85 124 66 7 1248 587 313 151 20 chr15 86922464 86922908 -16572066 - MER92B LTR ERV1 -74 562 61 7 1248 393 22 0 0 chr15 86923671 86923717 -16571257 + (TCCCC)n Simple_repeat Simple_repeat 1 46 0 7 1248 1062 0 31 25 chr15 86923717 86923879 -16571095 + (TTCTC)n Simple_repeat Simple_repeat 1 163 0 7 1248 396 179 0 0 chr15 86923943 86924055 -16570919 + CT-rich Low_complexity Low_complexity 1 112 0 7 1248 315 0 0 0 chr15 86924055 86924090 -16570884 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1248 854 295 53 8 chr15 86924427 86924690 -16570284 - MLT1A0 LTR MaLR -4 361 87 7 1248 653 345 45 31 chr15 86926303 86926790 -16568184 - L1ME3A LINE L1 -236 6797 6304 7 1248 639 315 181 24 chr15 86927033 86927860 -16567114 - L1ME3A LINE L1 -1072 5934 4978 7 1248 315 324 87 100 chr15 86928104 86928334 -16566640 - L1ME3A LINE L1 -3779 3227 3001 7 1248 591 264 59 86 chr15 86928355 86928575 -16566399 - B3 SINE B2 -1 215 2 7 1248 331 145 0 28 chr15 86928669 86928740 -16566234 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 7 1248 878 246 39 0 chr15 86928744 86928951 -16566023 - B3 SINE B2 0 216 2 7 1248 1701 299 52 25 chr15 86929324 86929935 -16565039 - Lx8 LINE L1 -419 7054 6427 7 1248 549 301 75 17 chr15 86929945 86930406 -16564568 - L1ME3A LINE L1 -5105 2229 1756 7 1248 278 318 73 62 chr15 86930611 86930886 -16564088 - L1ME3A LINE L1 -5570 1334 1057 7 1248 322 289 111 97 chr15 86931588 86931940 -16563034 - L1MEg LINE L1 -5414 670 314 7 1248 220 330 146 11 chr15 86932675 86932764 -16562210 - MIRm SINE MIR -128 148 48 7 1248 824 267 128 28 chr15 86933922 86934241 -16560733 + ORR1D2 LTR MaLR 46 394 0 7 1248 2958 275 53 35 chr15 86934306 86935252 -16559722 - ORR1D2-int LTR MaLR -407 963 1 7 1248 1208 250 73 31 chr15 86935252 86935607 -16559367 - ORR1D2 LTR MaLR 0 370 1 7 1248 189 0 0 0 chr15 86935619 86935640 -16559334 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 7 1248 1019 259 73 94 chr15 86937261 86937755 -16557219 - RMER15 LTR ERVL 0 575 1 7 1248 277 235 134 12 chr15 86937833 86937915 -16557059 + MLT1A1 LTR MaLR 315 406 -2 7 1248 201 256 90 0 chr15 86938690 86938768 -16556206 - MIRb SINE MIR 0 268 184 7 1248 1446 248 70 15 chr15 86940095 86940492 -16554482 + MTD LTR MaLR 1 419 0 7 1248 221 372 30 37 chr15 86940916 86941050 -16553924 - MIRc SINE MIR -5 263 131 7 1248 288 0 0 0 chr15 86941530 86941562 -16553412 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 7 1248 455 264 126 44 chr15 86941563 86941698 -16553276 - RSINE1 SINE B4 0 165 20 7 1248 1034 191 61 14 chr15 86944257 86944470 -16550504 - URR1A DNA MER1_type 0 226 4 7 1248 596 307 148 46 chr15 86944495 86944758 -16550216 + MTE2b LTR MaLR 13 302 -77 7 1248 667 75 42 0 chr15 86944875 86944995 -16549979 + (TAGA)n Simple_repeat Simple_repeat 1 125 0 7 1248 288 0 0 0 chr15 86945915 86945947 -16549027 + (TA)n Simple_repeat Simple_repeat 1 32 0 7 1248 366 169 11 0 chr15 86946113 86946202 -16548772 - Lx4A LINE L1 0 7058 6969 7 1248 1953 150 67 26 chr15 86946202 86946593 -16548381 + RLTR28 LTR ERVL 105 511 -13 7 1248 336 333 60 27 chr15 86946690 86946875 -16548099 - L1MCa LINE L1 -757 5564 5374 7 1248 313 317 0 61 chr15 86946934 86947065 -16547909 + MTEa LTR MaLR 2 124 -255 7 1248 752 173 17 11 chr15 86947133 86947308 -16547666 + C-rich Low_complexity Low_complexity 5 180 0 7 1248 1048 316 101 26 chr15 86947594 86948316 -16546658 - L1MCa LINE L1 -1115 5206 4431 7 1248 4070 162 86 69 chr15 86948413 86949300 -16545674 + RMER19B LTR ERVK 1 902 0 7 1248 549 55 0 0 chr15 86949324 86949397 -16545577 + (TG)n Simple_repeat Simple_repeat 2 74 0 7 1248 622 250 61 0 chr15 86949406 86949554 -16545420 - B3A SINE B2 -38 160 4 7 1248 264 236 4 181 chr15 86949707 86949950 -16545024 - L1MCa LINE L1 -2583 3738 3539 7 1248 249 319 33 0 chr15 86949953 86950044 -16544930 - Lx7 LINE L1 -16 7680 7587 7 1248 421 315 78 23 chr15 86950330 86950779 -16544195 - L1MCa LINE L1 -2833 3488 2996 7 1248 307 192 13 13 chr15 86950899 86950978 -16543996 + (TATATG)n Simple_repeat Simple_repeat 3 81 0 7 1248 551 149 0 9 chr15 86950967 86951075 -16543899 + (CA)n Simple_repeat Simple_repeat 2 108 0 7 1248 324 0 0 0 chr15 86951093 86951129 -16543845 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 1248 929 270 43 25 chr15 86951166 86951447 -16543527 - B4A SINE B4 0 292 7 7 1248 1703 257 60 3 chr15 86951493 86952086 -16542888 - L1MCa LINE L1 -3417 2904 2268 7 1248 464 227 180 94 chr15 86952150 86952417 -16542557 - B4A SINE B4 -2 290 1 7 1248 273 289 10 0 chr15 86952507 86952611 -16542363 - L1MA9 LINE L1 -419 5893 5789 7 1248 222 145 0 61 chr15 86953080 86953146 -16541828 + GA-rich Low_complexity Low_complexity 4 65 0 7 1248 273 266 25 12 chr15 86953671 86953751 -16541223 - RMER12 LTR ERVK -141 1181 1101 7 1248 4959 93 19 23 chr15 86953930 86954764 -16540210 - RLTR22_Mur LTR ERVK -1017 831 1 7 1248 185 219 0 0 chr15 86956094 86956135 -16538839 + L2c LINE L2 3347 3387 0 7 1248 890 116 0 7 chr15 86956699 86956847 -16538127 + (GGAA)n Simple_repeat Simple_repeat 4 150 0 7 1248 351 0 0 0 chr15 86957178 86957217 -16537757 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 1248 1381 87 0 18 chr15 86957792 86958015 -16536959 - L1_Mus4 LINE L1 0 6636 6418 7 1248 4205 100 25 3 chr15 86958033 86958646 -16536328 - L1_Mus3 LINE L1 -4 6634 6009 7 1248 4102 48 6 4 chr15 86958681 86959181 -16535793 - L1Md_F2 LINE L1 0 6582 6082 7 1248 303 133 0 0 chr15 86959305 86959350 -16535624 - ORR1B1 LTR MaLR -9 358 314 7 1248 865 132 7 0 chr15 86959357 86959493 -16535481 - L1_Mur2 LINE L1 -3542 2335 2199 7 1248 6362 67 1 2 chr15 86959511 86960310 -16534664 - L1Md_F2 LINE L1 -17 6565 5768 7 1248 9793 66 3 1 chr15 86960310 86961544 -16533430 + L1Md_F2 LINE L1 4520 5756 -127 7 1248 1888 121 64 15 chr15 86961544 86961887 -16533087 - ORR1B1 LTR MaLR -32 362 3 7 1248 204 298 0 45 chr15 86963071 86963159 -16531815 + (CATA)n Simple_repeat Simple_repeat 3 86 0 7 1248 665 110 8 0 chr15 86963168 86963286 -16531688 + (CA)n Simple_repeat Simple_repeat 2 120 0 7 1248 284 262 11 45 chr15 86963604 86963692 -16531282 - PB1D10 SINE Alu -7 110 26 7 1248 1367 191 195 9 chr15 86963803 86964121 -16530853 - MTC LTR MaLR -8 413 37 7 1248 1095 252 59 48 chr15 86965198 86965552 -16529422 - ORR1E LTR MaLR -1 358 1 7 1248 404 202 87 0 chr15 86966069 86966173 -16528801 - MTEa LTR MaLR -3 376 264 7 1248 1198 240 50 0 chr15 86966295 86966578 -16528396 - MTEa LTR MaLR -76 303 7 7 1248 353 209 119 25 chr15 86966709 86966827 -16528147 + L1MA7 LINE L1 6151 6279 -12 7 1248 503 220 40 13 chr15 86966826 86966978 -16527996 + L1MA7 LINE L1 6133 6288 -3 7 1248 378 0 0 0 chr15 86967577 86967619 -16527355 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 1248 897 302 120 15 chr15 86967712 86968186 -16526788 - MLT2B5 LTR ERVL -98 619 96 7 1248 283 306 31 31 chr15 86968511 86968639 -16526335 + L1MEe LINE L1 569 696 -4158 7 1248 555 288 27 23 chr15 86969027 86969247 -16525727 - RMER15 LTR ERVL -15 560 340 7 1248 528 16 0 0 chr15 86970120 86970181 -16524793 + (TC)n Simple_repeat Simple_repeat 2 62 0 7 1248 225 0 0 0 chr15 86970181 86970205 -16524769 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 1248 658 314 0 0 chr15 86970214 86970373 -16524601 - B3A SINE B2 -38 160 2 7 1248 449 231 75 25 chr15 86970514 86970634 -16524340 + B1_Mur1 SINE Alu 24 149 0 7 1248 318 115 0 0 chr15 86970636 86970697 -16524277 + (A)n Simple_repeat Simple_repeat 1 61 0 7 1248 307 319 35 0 chr15 86970793 86970909 -16524065 + MLT1D-int LTR MaLR 1369 1488 -1 7 1248 285 189 53 13 chr15 86971011 86971086 -16523888 + MLT1D LTR MaLR 428 505 0 7 1248 903 19 0 0 chr15 86971244 86971349 -16523625 + (GA)n Simple_repeat Simple_repeat 2 106 0 7 1248 548 313 59 10 chr15 86972002 86972205 -16522769 - Lx8 LINE L1 -179 7294 7082 7 1248 720 284 23 78 chr15 86972209 86972469 -16522505 - B4A SINE B4 0 292 46 7 1248 2064 161 16 11 chr15 86972469 86972833 -16522141 - ORR1B2 LTR MaLR -1 366 1 7 1248 720 288 19 70 chr15 86972833 86972878 -16522096 - B4A SINE B4 -247 45 4 7 1248 41683 12 0 6 chr15 86973620 86979814 -16515160 - L1Md_A LINE L1 0 6582 433 7 1248 343 388 0 15 chr15 86980196 86980332 -16514642 + RSINE1 SINE B4 28 161 -4 7 1248 611 309 35 0 chr15 86980633 86980834 -16514140 + L1M5 LINE L1 5432 5639 -601 7 1248 227 306 122 43 chr15 86981461 86981625 -16513349 + MLT1A0 LTR MaLR 16 192 -173 7 1248 687 180 196 80 chr15 86981699 86981898 -16513076 - URR1A DNA MER1_type 0 226 5 7 1248 324 269 27 60 chr15 86982577 86982727 -16512247 + MTEa LTR MaLR 231 375 -4 7 1248 252 86 0 0 chr15 86984196 86984231 -16510743 + (TG)n Simple_repeat Simple_repeat 1 35 0 7 1248 751 320 4 22 chr15 86984232 86984504 -16510470 - B4A SINE B4 -23 269 3 7 1248 445 358 25 15 chr15 86984557 86984753 -16510221 - B4A SINE B4 -94 198 1 7 1248 243 281 122 33 chr15 86984754 86985056 -16509918 + BLACKJACK DNA AcHobo 1097 1425 -1519 7 1248 370 287 78 9 chr15 86985062 86985178 -16509796 - B1_Mur1 SINE Alu -21 128 5 7 1248 477 287 165 14 chr15 86985490 86985787 -16509187 + BLACKJACK DNA AcHobo 1766 2107 -837 7 1248 611 253 0 95 chr15 86986032 86986211 -16508763 + RSINE1 SINE B4 2 163 -2 7 1248 797 124 22 0 chr15 86986379 86986516 -16508458 - URR1B DNA MER1_type -3 222 83 7 1248 252 77 0 0 chr15 86986519 86986558 -16508416 + (T)n Simple_repeat Simple_repeat 1 39 0 7 1248 318 282 266 5 chr15 86986821 86987035 -16507939 - L1M5 LINE L1 -391 5773 5504 7 1248 22 0 0 0 chr15 86987433 86987455 -16507519 + AT_rich Low_complexity Low_complexity 1 22 0 7 1248 471 35 0 0 chr15 86987468 86987525 -16507449 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 1248 444 228 104 16 chr15 86987676 86987801 -16507173 - B3A SINE B2 -55 143 8 8 1248 766 264 238 18 chr15 86987844 86988176 -16506798 + MTD LTR MaLR 1 405 -14 8 1248 39 38 0 0 chr15 86988292 86988345 -16506629 + AT_rich Low_complexity Low_complexity 1 53 0 8 1248 919 86 17 11 chr15 86988538 86988714 -16506260 + (TCTA)n Simple_repeat Simple_repeat 3 179 0 8 1248 481 120 22 0 chr15 86988729 86988821 -16506153 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 8 1248 265 316 10 0 chr15 86988886 86988984 -16505990 - L1MC LINE L1 -2756 3390 3292 8 1248 331 256 0 12 chr15 86989178 86989261 -16505713 + ID4_ SINE ID 2 83 0 8 1248 267 232 187 75 chr15 86989319 86989426 -16505548 - PB1D9 SINE Alu 0 120 2 8 1248 322 340 114 26 chr15 86989608 86989880 -16505094 - L1M5 LINE L1 -3192 2954 2659 7 1248 253 236 87 33 chr15 86989979 86990071 -16504903 - RMER1C Other Other 0 1342 1246 8 1248 1574 277 75 48 chr15 86990001 86990424 -16504550 - Lx8 LINE L1 -5 7468 7032 8 1248 2026 170 3 8 chr15 86990424 86990785 -16504189 + RLTR15 LTR ERVK 1 359 0 8 1248 1574 278 75 50 chr15 86990785 86990991 -16503983 - Lx8 LINE L1 -442 7031 6821 8 1248 366 107 0 0 chr15 86990991 86991047 -16503927 + (TG)n Simple_repeat Simple_repeat 1 56 0 8 1248 1934 300 77 113 chr15 86991047 86991210 -16503764 - Lx8 LINE L1 -876 6820 6753 8 1248 2119 162 77 37 chr15 86991210 86991615 -16503359 - MTC LTR MaLR 0 421 1 8 1248 1934 268 115 47 chr15 86991615 86992266 -16502708 - Lx8 LINE L1 -710 6763 6060 8 1248 561 288 47 18 chr15 86992446 86992725 -16502249 - L1MC2 LINE L1 -237 6107 5821 8 1248 495 0 0 0 chr15 86992914 86992969 -16502005 + (CAG)n Simple_repeat Simple_repeat 2 56 0 8 1248 496 309 31 54 chr15 86995234 86995456 -16499518 - L1MD1 LINE L1 -61 6181 5965 8 1248 822 242 37 130 chr15 86995457 86995756 -16499218 - MTE2a LTR MaLR -108 271 1 8 1248 294 289 50 20 chr15 86995762 86995861 -16499113 - L1MD1 LINE L1 -335 5907 5806 8 1248 317 247 53 11 chr15 86995916 86996010 -16498964 - L1MD1 LINE L1 -534 5708 5611 8 1248 586 88 54 45 chr15 86996141 86996375 -16498599 + (TAGA)n Simple_repeat Simple_repeat 1 236 0 8 1248 755 157 0 27 chr15 86997155 86997307 -16497667 + B1_Mur3 SINE Alu 1 142 -8 8 1248 1091 64 0 6 chr15 86997307 86997465 -16497509 + (CAAAC)n Simple_repeat Simple_repeat 2 158 0 8 1248 474 147 73 10 chr15 86999542 86999638 -16495336 + 5S rRNA rRNA 1 102 -19 8 1248 369 0 0 0 chr15 86999909 86999950 -16495024 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1248 507 335 59 34 chr15 87000500 87000548 -16494426 - B3 SINE B2 -6 210 164 1 1248 387 0 0 0 chr15 87000548 87000591 -16494383 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1248 635 256 112 1 chr15 87000591 87000746 -16494228 - B3A SINE B2 -30 168 2 1 1248 200 100 0 24 chr15 87004325 87004366 -16490608 + (TTGGGG)n Simple_repeat Simple_repeat 2 41 0 3 1248 1277 248 16 49 chr15 87005414 87005779 -16489195 - Lx9 LINE L1 -377 7267 6915 4 1248 185 256 77 55 chr15 87006616 87006707 -16488267 + L3b LINE CR1 104 196 -286 5 1248 535 292 149 29 chr15 87009134 87009409 -16485565 + MLT1D LTR MaLR 126 433 -72 6 1248 2019 137 78 23 chr15 87011137 87011481 -16483493 - ORR1B2 LTR MaLR 0 367 5 7 1248 1288 249 6 43 chr15 87011755 87012082 -16482892 - RLTR11A LTR ERVK 0 528 214 8 1248 318 347 81 34 chr15 87012084 87012233 -16482741 - HAL1-3A_ME LINE L1 -419 2439 2284 9 1248 210 114 0 54 chr15 87012233 87012270 -16482704 + C-rich Low_complexity Low_complexity 2 36 0 1 1248 957 201 90 30 chr15 87012270 87012550 -16482424 - RLTR11A LTR ERVK -165 280 1 1 1248 368 104 15 0 chr15 87013174 87013241 -16481733 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 1248 231 36 0 0 chr15 87013329 87013357 -16481617 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1248 483 18 0 0 chr15 87013357 87013413 -16481561 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 1248 535 310 86 22 chr15 87013514 87013833 -16481141 - MLT2B2 LTR ERVL -54 513 143 1 1248 554 177 0 25 chr15 87013981 87014143 -16480831 + (TG)n Simple_repeat Simple_repeat 2 159 0 1 1248 303 283 25 42 chr15 87015638 87015756 -16479218 + URR1B DNA MER1_type 110 225 0 1 1248 808 67 25 0 chr15 87015867 87015986 -16478988 + (TTCC)n Simple_repeat Simple_repeat 4 125 0 1 1248 597 14 0 0 chr15 87016905 87016975 -16477999 + (CA)n Simple_repeat Simple_repeat 1 70 0 1 1248 484 315 65 50 chr15 87017003 87017359 -16477615 - MLT1C LTR MaLR -6 384 35 2 1248 339 356 61 12 chr15 87018139 87018282 -16476692 + MLT1A1 LTR MaLR 25 175 -233 2 1248 709 289 35 175 chr15 87018282 87018688 -16476286 - MTE2a LTR MaLR 0 379 31 2 1248 510 252 73 26 chr15 87018740 87018891 -16476083 + MLT1A1 LTR MaLR 228 385 -23 2 1248 230 333 132 69 chr15 87019265 87019729 -16475245 + LTR33 LTR ERVL 21 513 -2 2 1248 180 0 0 0 chr15 87022058 87022078 -16472896 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 1248 711 260 11 48 chr15 87022390 87022576 -16472398 + B3A SINE B2 2 180 -18 2 1248 1068 267 33 56 chr15 87022615 87023011 -16471963 + Charlie1a DNA MER1_type 992 1378 -77 2 1248 731 277 82 65 chr15 87023036 87023329 -16471645 - MTEa LTR MaLR -32 347 50 2 1248 1362 134 0 15 chr15 87023632 87023837 -16471137 + MTC LTR MaLR 2 203 -218 2 1248 1091 151 10 15 chr15 87023837 87024032 -16470942 + L1_Mur2 LINE L1 5129 5322 -555 2 1248 331 354 54 138 chr15 87025343 87025641 -16469333 + B4 SINE B4 2 274 -18 3 1248 217 299 14 29 chr15 87025610 87025679 -16469295 + RSINE1 SINE B4 98 165 0 3 1248 315 283 41 55 chr15 87025736 87025882 -16469092 + L1MC4 LINE L1 6728 6871 -1171 3 1248 797 217 0 0 chr15 87026416 87026554 -16468420 - B1_Mur1 SINE Alu -10 139 2 3 1248 372 22 0 0 chr15 87027519 87027564 -16467410 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 3 1248 228 154 0 0 chr15 87028525 87028577 -16466397 + T-rich Low_complexity Low_complexity 4 55 0 3 1248 602 221 33 0 chr15 87028585 87028707 -16466267 - MTEa LTR MaLR -52 327 202 3 1248 422 325 49 61 chr15 87029093 87029335 -16465639 - RMER5 LTR ERV1 -15 519 281 3 1248 389 308 54 27 chr15 87029335 87029482 -16465492 - RMER30 DNA MER1_type -3 199 49 3 1248 483 326 114 9 chr15 87029510 87029730 -16465244 - RMER5 LTR ERV1 -260 274 32 3 1248 263 265 193 62 chr15 87030436 87030581 -16464393 + RMER15 LTR ERVL 352 515 -60 3 1248 230 132 0 19 chr15 87031057 87031111 -16463863 + A-rich Low_complexity Low_complexity 2 54 0 4 19 780 270 66 23 chr15 87031564 87031822 -16463152 - L3 LINE CR1 -748 3741 3473 4 1249 889 151 76 91 chr15 87033209 87033406 -16461568 + ORR1C2 LTR MaLR 1 194 -190 4 1249 507 45 0 0 chr15 87033409 87033475 -16461499 + (TC)n Simple_repeat Simple_repeat 1 66 0 4 1249 342 0 0 0 chr15 87033475 87033513 -16461461 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1249 210 372 32 32 chr15 87033548 87033673 -16461301 + PB1 SINE Alu 1 125 -2 4 1249 2035 131 27 50 chr15 87034492 87034829 -16460145 + ORR1A4 LTR MaLR 1 329 0 4 1249 317 353 35 0 chr15 87035818 87035988 -16458986 + L1M4 LINE L1 782 957 -5585 4 1249 378 251 11 159 chr15 87036074 87036329 -16458645 + B4A SINE B4 8 215 -77 4 1249 207 70 239 26 chr15 87036376 87036468 -16458506 + (TGGA)n Simple_repeat Simple_repeat 3 120 0 4 1249 939 117 0 0 chr15 87036468 87036648 -16458326 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 5 1249 207 70 239 26 chr15 87036648 87036672 -16458302 + (TGGA)n Simple_repeat Simple_repeat 1 24 0 5 1249 389 322 19 10 chr15 87038330 87038645 -16456329 + GA-rich Low_complexity Low_complexity 1 318 0 5 1249 310 305 132 25 chr15 87038650 87038771 -16456203 + HAL1-3A_ME LINE L1 2073 2206 -652 5 1249 284 224 17 33 chr15 87038777 87038897 -16456077 + GA-rich Low_complexity Low_complexity 3 120 0 5 1249 242 308 59 78 chr15 87039760 87039888 -16455086 + L2b LINE L2 3255 3425 -1 5 1249 24 0 0 0 chr15 87041050 87041074 -16453900 + AT_rich Low_complexity Low_complexity 1 24 0 5 1249 225 0 0 0 chr15 87041438 87041463 -16453511 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 1249 270 294 21 49 chr15 87041806 87041949 -16453025 - L1M3 LINE L1 -484 5705 5567 5 1249 547 324 15 0 chr15 87041946 87042150 -16452824 + L1MA4 LINE L1 5730 5936 -364 5 1249 35978 69 2 10 chr15 87042639 87048655 -16446319 - L1Md_F2 LINE L1 0 6582 354 6 1249 267 368 8 37 chr15 87048657 87048900 -16446074 + L1M5 LINE L1 4470 4705 -1441 6 1249 216 97 0 0 chr15 87049058 87049089 -16445885 + (TTTTC)n Simple_repeat Simple_repeat 4 34 0 6 1249 23 0 0 0 chr15 87049115 87049138 -16445836 + AT_rich Low_complexity Low_complexity 1 23 0 6 1249 1102 44 0 0 chr15 87049147 87049283 -16445691 + B1_Mus1 SINE Alu 13 148 0 6 1249 22 0 0 0 chr15 87049283 87049305 -16445669 + AT_rich Low_complexity Low_complexity 1 22 0 6 1249 817 227 20 29 chr15 87049308 87049512 -16445462 - B3 SINE B2 -11 205 4 6 1249 1007 268 56 31 chr15 87049515 87049873 -16445101 - Lx8 LINE L1 -25 7448 7082 6 1249 473 278 0 0 chr15 87050133 87050241 -16444733 + ID_B1 SINE B4 117 224 0 6 1249 373 277 18 18 chr15 87050296 87050410 -16444564 + PB1D10 SINE Alu 3 116 -1 6 1249 237 218 19 29 chr15 87050560 87050664 -16444310 + GA-rich Low_complexity Low_complexity 4 106 0 7 1249 960 93 0 0 chr15 87051201 87051322 -16443652 + (GGA)n Simple_repeat Simple_repeat 3 123 0 7 1249 1358 51 11 0 chr15 87051322 87051500 -16443474 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 7 1249 960 93 0 0 chr15 87051500 87051517 -16443457 + (GGA)n Simple_repeat Simple_repeat 1 17 0 7 1249 511 164 0 0 chr15 87051517 87051621 -16443353 + GA-rich Low_complexity Low_complexity 3 106 0 7 1249 204 67 0 0 chr15 87051689 87051719 -16443255 + (TTG)n Simple_repeat Simple_repeat 1 30 0 7 1249 920 205 30 15 chr15 87051785 87051983 -16442991 - MTEa LTR MaLR -11 368 168 7 1249 789 259 71 0 chr15 87051995 87052192 -16442782 - B3 SINE B2 0 216 6 7 1249 243 125 0 0 chr15 87052648 87052688 -16442286 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 7 1249 1080 57 50 0 chr15 87052722 87052862 -16442112 + B1_Mus1 SINE Alu 2 148 0 7 1249 181 226 73 36 chr15 87053295 87053350 -16441624 + MER5A DNA MER1_type 33 89 -100 8 1249 378 265 207 37 chr15 87053923 87054111 -16440863 - RMER15 LTR ERVL -20 555 336 8 1249 1081 272 8 4 chr15 87054287 87054531 -16440443 - B4A SINE B4 -47 245 1 8 1249 681 242 26 36 chr15 87055108 87055129 -16439845 - B3A SINE B2 -3 195 175 8 1249 306 106 0 0 chr15 87055129 87055176 -16439798 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1249 681 242 26 36 chr15 87055176 87055347 -16439627 - B3A SINE B2 -24 174 5 8 1249 677 233 8 0 chr15 87055440 87055573 -16439401 - B1_Mus1 SINE Alu 0 148 15 8 1249 232 252 68 115 chr15 87055446 87055594 -16439380 - B4A SINE B4 -71 221 81 8 1249 955 290 33 44 chr15 87055662 87055933 -16439041 - B4A SINE B4 -5 287 20 8 1249 426 358 18 0 chr15 87056057 87056222 -16438752 - MER2 DNA MER2_type -89 256 89 8 1249 438 270 43 17 chr15 87056962 87057079 -16437895 + RSINE1 SINE B4 2 121 -44 8 1249 432 0 0 0 chr15 87057100 87057148 -16437826 + (CA)n Simple_repeat Simple_repeat 1 48 0 9 1249 308 297 161 54 chr15 87057379 87057603 -16437371 + L1M5 LINE L1 5380 5627 -613 9 1249 764 287 109 35 chr15 87058513 87058800 -16436174 + B4 SINE B4 1 292 0 9 1249 620 224 201 32 chr15 87059030 87059219 -16435755 + URR1A DNA MER1_type 1 221 -5 9 1249 262 232 60 12 chr15 87060772 87060855 -16434119 + L1M5 LINE L1 5561 5647 -477 9 1249 426 271 109 59 chr15 87061253 87061415 -16433559 - L1MA6 LINE L1 -7 6293 6123 9 1249 1070 256 102 6 chr15 87061415 87061749 -16433225 + ORR1D2 LTR MaLR 5 370 0 9 1249 426 271 109 59 chr15 87061749 87061761 -16433213 - L1MA6 LINE L1 -178 6122 6115 9 1249 527 262 177 16 chr15 87061761 87061947 -16433027 - ID_B1 SINE B4 -4 220 5 9 1249 426 271 109 59 chr15 87061947 87062010 -16432964 - L1MA6 LINE L1 -186 6114 6043 9 1249 227 301 48 0 chr15 87062109 87062192 -16432782 + L1M2 LINE L1 5692 5778 -513 9 1249 961 246 66 0 chr15 87062388 87062603 -16432371 + B4A SINE B4 2 231 -61 9 1249 658 305 12 0 chr15 87062603 87062767 -16432207 + B3A SINE B2 1 166 -32 1 1249 540 81 0 0 chr15 87062769 87062843 -16432131 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 1249 300 292 0 15 chr15 87062845 87062911 -16432063 + B4A SINE B4 228 292 0 9 1249 360 247 41 41 chr15 87065730 87065827 -16429147 + PB1 SINE Alu 14 110 -17 1 1249 206 333 94 16 chr15 87066557 87066685 -16428289 - MIRb SINE MIR -66 202 65 1 1249 974 107 0 7 chr15 87066862 87066873 -16428101 + (GA)n Simple_repeat Simple_repeat 2 12 0 1 1249 1433 23 11 0 chr15 87066873 87067049 -16427925 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 1 1249 974 107 0 7 chr15 87067049 87067188 -16427786 + (GA)n Simple_repeat Simple_repeat 1 139 0 1 1249 969 271 90 31 chr15 87068502 87068839 -16426135 + Lx9 LINE L1 7122 7475 -169 1 1249 522 0 0 0 chr15 87068839 87068897 -16426077 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 1 1249 969 271 90 31 chr15 87068897 87068929 -16426045 + Lx9 LINE L1 7476 7510 -134 1 1249 201 39 0 0 chr15 87068929 87068955 -16426019 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1249 969 271 90 31 chr15 87068955 87069040 -16425934 + Lx9 LINE L1 7511 7603 -41 1 1249 710 255 120 87 chr15 87069132 87069587 -16425387 + RMER13A LTR ERVK 88 599 -28 1 1249 646 301 66 12 chr15 87071108 87071350 -16423624 + L1MA9 LINE L1 6054 6308 -4 1 1249 333 0 0 0 chr15 87072005 87072042 -16422932 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1249 675 0 0 0 chr15 87073312 87073387 -16421587 + (CAG)n Simple_repeat Simple_repeat 1 75 0 1 1249 1167 75 0 0 chr15 87074508 87074654 -16420320 + B1_Mus1 SINE Alu 3 148 0 1 1249 36 23 0 0 chr15 87074664 87074707 -16420267 + AT_rich Low_complexity Low_complexity 1 43 0 1 1249 266 314 166 36 chr15 87076400 87076678 -16418296 - Lx8 LINE L1 -3 7470 7157 1 1249 337 359 104 29 chr15 87076801 87077042 -16417932 + Lx8 LINE L1 6781 7039 -434 1 1249 403 265 10 10 chr15 87077058 87077157 -16417817 - PB1D10 SINE Alu -8 109 11 1 1249 564 15 0 0 chr15 87077783 87077848 -16417126 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 1249 456 19 0 0 chr15 87077849 87077902 -16417072 + (GGAA)n Simple_repeat Simple_repeat 1 53 0 1 1249 522 0 0 0 chr15 87078705 87078763 -16416211 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 1249 739 278 0 40 chr15 87079248 87079447 -16415527 - B3A SINE B2 0 198 8 1 1249 866 320 58 37 chr15 87079584 87080016 -16414958 + MT2A LTR ERVL 93 533 0 1 1249 1688 209 53 3 chr15 87080452 87080808 -16414166 + ORR1D1 LTR MaLR 1 374 0 1 1249 284 290 102 59 chr15 87081174 87081524 -16413450 + RLTR21 LTR ERVK 742 1306 -266 1 1249 249 233 0 75 chr15 87081455 87081548 -16413426 - RLTR40 LTR ERVK -162 655 570 1 1249 1374 121 0 15 chr15 87082573 87082774 -16412200 + URR1A DNA MER1_type 29 226 0 1 1249 530 253 50 40 chr15 87082595 87082797 -16412177 - CYRA11_Mm Unknown Y-chromosome -272 345 142 1 1249 396 0 0 0 chr15 87082963 87083007 -16411967 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1249 204 40 0 0 chr15 87083040 87083065 -16411909 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1249 597 220 13 54 chr15 87083136 87083285 -16411689 - MTD LTR MaLR -14 405 263 1 1249 641 239 51 46 chr15 87083311 87083486 -16411488 - MTD LTR MaLR -241 178 3 1 1249 316 337 142 44 chr15 87084160 87084455 -16410519 + L2a LINE L2 3100 3423 -3 1 1249 697 307 46 28 chr15 87085197 87085482 -16409492 + B4 SINE B4 1 290 -2 1 1249 426 139 0 0 chr15 87085508 87085580 -16409394 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 1249 195 290 0 0 chr15 87086120 87086220 -16408754 + (CA)n Simple_repeat Simple_repeat 1 100 0 1 1249 515 309 0 11 chr15 87086317 87086497 -16408477 + (CATA)n Simple_repeat Simple_repeat 1 178 0 1 1249 202 205 0 0 chr15 87086537 87086576 -16408398 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1249 375 78 0 0 chr15 87088252 87088303 -16406671 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1249 181 242 32 0 chr15 87089373 87089468 -16405506 + (TCCA)n Simple_repeat Simple_repeat 3 100 0 1 1249 270 318 22 55 chr15 87089500 87089683 -16405291 + (TCCA)n Simple_repeat Simple_repeat 3 179 0 1 1249 295 345 60 33 chr15 87093002 87093185 -16401789 + ORR1E LTR MaLR 3 190 -169 1 1249 319 300 117 0 chr15 87093272 87093392 -16401582 + RMER15 LTR ERVL 439 572 -3 1 1249 3044 277 13 1 chr15 87093424 87094137 -16400837 + RMER15-int LTR ERVL 35 755 -4244 1 1249 243 268 0 14 chr15 87095300 87095400 -16399574 + CT-rich Low_complexity Low_complexity 1 98 0 1 1249 566 326 21 0 chr15 87095400 87095541 -16399433 - RSINE1 SINE B4 -18 147 4 1 1249 1171 90 0 17 chr15 87095822 87096003 -16398971 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1 1249 609 14 0 0 chr15 87096003 87096073 -16398901 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1249 258 293 91 35 chr15 87096495 87096636 -16398338 - MIRc SINE MIR -51 217 66 1 1249 378 0 0 0 chr15 87097093 87097135 -16397839 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1 1249 306 257 0 0 chr15 87097135 87097209 -16397765 - ID4_ SINE ID -7 76 3 1 1249 297 0 0 0 chr15 87097228 87097261 -16397713 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1249 1303 264 64 75 chr15 87097281 87097440 -16397534 + MTEa LTR MaLR 20 181 -198 1 1249 978 110 0 0 chr15 87097440 87097586 -16397388 + (GAA)n Simple_repeat Simple_repeat 3 148 0 1 1249 1303 264 64 75 chr15 87097586 87097787 -16397187 + MTEa LTR MaLR 182 376 -3 1 1249 530 273 153 35 chr15 87097818 87098046 -16396928 + B4A SINE B4 1 255 -37 1 1249 424 311 100 17 chr15 87098029 87098209 -16396765 + MTEb-int LTR MaLR 232 426 -1154 1 1249 378 271 91 23 chr15 87098230 87098362 -16396612 + MTEb-int LTR MaLR 1434 1574 -6 1 1249 471 323 80 30 chr15 87098373 87098574 -16396400 + MTEb LTR MaLR 17 227 -152 1 1249 212 143 0 0 chr15 87098762 87098797 -16396177 + (CACCC)n Simple_repeat Simple_repeat 1 35 0 1 1249 246 32 0 0 chr15 87098797 87098828 -16396146 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1249 200 237 83 95 chr15 87099594 87099678 -16395296 - MER5A DNA MER1_type -63 126 44 1 1249 858 206 85 10 chr15 87099789 87099990 -16394984 + B3 SINE B2 1 216 0 1 1249 186 43 0 0 chr15 87100006 87100029 -16394945 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 1249 393 58 0 0 chr15 87100057 87100109 -16394865 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1249 2190 192 15 12 chr15 87101511 87101918 -16393056 + MTD LTR MaLR 1 408 -11 1 1249 330 328 27 86 chr15 87102100 87102287 -16392687 + MLT1B LTR MaLR 5 180 -210 1 1249 222 62 0 0 chr15 87102336 87102368 -16392606 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 1 1249 1250 175 28 0 chr15 87102449 87102666 -16392308 + URR1A DNA MER1_type 4 226 0 1 1249 1221 221 39 119 chr15 87103033 87103444 -16391530 + MTE2a LTR MaLR 1 378 -1 1 1249 31 0 0 0 chr15 87104139 87104170 -16390804 + AT_rich Low_complexity Low_complexity 1 31 0 1 1249 238 264 85 69 chr15 87105100 87105230 -16389744 + L1MD LINE L1 5028 5159 -987 1 1249 1871 198 16 24 chr15 87106372 87106749 -16388225 - ORR1D1 LTR MaLR 0 374 1 1 1249 418 244 6 12 chr15 87107110 87107272 -16387702 + (TATG)n Simple_repeat Simple_repeat 2 162 0 1 1249 325 185 31 0 chr15 87107273 87107338 -16387636 - HAL1-3A_ME LINE L1 -831 2027 1961 1 1249 227 345 87 16 chr15 87107375 87107687 -16387287 - L1MEf LINE L1 -2877 3667 3334 1 1249 318 341 158 29 chr15 87108169 87108510 -16386464 - L1MEf LINE L1 -4374 2266 1882 1 1249 603 0 0 0 chr15 87108510 87108577 -16386397 + (TTCTC)n Simple_repeat Simple_repeat 1 67 0 1 1249 1055 71 29 12 chr15 87108577 87108747 -16386227 + (TTTC)n Simple_repeat Simple_repeat 3 175 0 1 1249 350 367 89 59 chr15 87109018 87109342 -16385632 - L1MEf LINE L1 -5303 1337 1004 1 1249 357 243 0 0 chr15 87109422 87109492 -16385482 + ID4_ SINE ID 2 71 -12 1 1249 251 274 124 0 chr15 87110094 87110207 -16384767 - L1MEf LINE L1 -6387 160 34 1 1249 330 26 0 0 chr15 87110271 87110310 -16384664 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1249 335 23 0 22 chr15 87111059 87111104 -16383870 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1249 360 317 43 43 chr15 87111171 87111405 -16383569 + RLTR15 LTR ERVK 53 286 -73 1 1249 441 0 0 0 chr15 87111405 87111454 -16383520 + (TAA)n Simple_repeat Simple_repeat 3 51 0 1 1249 1368 166 14 0 chr15 87111512 87111735 -16383239 + URR1A DNA MER1_type 1 226 0 1 1249 453 343 121 63 chr15 87113951 87114315 -16380659 - MLT1J-int LTR MaLR -711 676 292 1 1249 192 231 75 19 chr15 87114537 87114590 -16380384 - L3 LINE CR1 -1316 3173 3118 1 1249 859 276 35 76 chr15 87115190 87115558 -16379416 + ORR1E LTR MaLR 5 357 -2 1 1249 1319 230 85 5 chr15 87115706 87116034 -16378940 + MTD LTR MaLR 68 403 -16 1 1249 370 303 30 10 chr15 87116174 87116274 -16378700 + ORR1E LTR MaLR 1 102 -257 1 1249 344 294 55 66 chr15 87116294 87116476 -16378498 + ORR1E LTR MaLR 173 352 -7 1 1249 719 288 40 25 chr15 87116897 87117175 -16377799 + B4 SINE B4 4 285 -7 1 1249 366 80 0 0 chr15 87117192 87117242 -16377732 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1249 423 0 0 0 chr15 87117242 87117288 -16377686 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 1249 1224 287 59 3 chr15 87118692 87119014 -16375960 - MTE2b LTR MaLR -38 341 2 1 1249 496 318 55 21 chr15 87119153 87119442 -16375532 + L1MB7 LINE L1 4937 5235 -911 1 1249 374 289 120 18 chr15 87119566 87119841 -16375133 + L1MB7 LINE L1 5331 5633 -545 1 1249 270 364 19 7 chr15 87120167 87120322 -16374652 + L1MB7 LINE L1 6020 6176 -8 1 1249 227 236 57 106 chr15 87120851 87120974 -16374000 + MER67B LTR ERV1 243 359 -302 1 1249 668 104 32 0 chr15 87121132 87121257 -16373717 + (TAGA)n Simple_repeat Simple_repeat 1 129 0 1 1249 396 0 0 0 chr15 87121267 87121311 -16373663 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1249 3018 15 6 0 chr15 87124392 87124727 -16370247 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1249 57910 16 11 4 chr15 87124727 87131158 -16363816 + IAPEz-int LTR ERVK 8 6481 0 1 1249 3032 12 6 0 chr15 87131158 87131493 -16363481 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1249 369 0 0 0 chr15 87131506 87131547 -16363427 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1249 554 321 57 21 chr15 87132308 87132588 -16362386 + B4A SINE B4 3 292 0 1 1249 764 265 48 53 chr15 87133420 87133627 -16361347 + B4 SINE B4 65 270 -22 1 1249 393 22 0 0 chr15 87133628 87133674 -16361300 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1249 581 306 15 27 chr15 87134493 87134752 -16360222 + L1M5 LINE L1 2869 3124 -3022 1 1249 186 226 30 75 chr15 87134846 87134913 -16360061 - L3 LINE CR1 -4425 64 1 1 1249 367 319 21 14 chr15 87135025 87135165 -16359809 + MLT1B LTR MaLR 35 175 -215 1 1249 926 285 16 7 chr15 87135190 87135433 -16359541 + ID_B1 SINE B4 10 254 -38 1 1249 1551 241 53 41 chr15 87135456 87135872 -16359102 + MTC LTR MaLR 1 421 0 2 1249 308 363 0 0 chr15 87136925 87137027 -16357947 + GA-rich Low_complexity Low_complexity 3 104 0 2 1249 243 309 47 26 chr15 87138363 87138556 -16356418 + L1MB7 LINE L1 5979 6175 -9 2 1249 946 235 14 9 chr15 87138574 87138789 -16356185 + B3 SINE B2 1 216 0 2 1249 1034 38 0 22 chr15 87138856 87138992 -16355982 - L1Md_F2 LINE L1 -15 6567 6435 2 1249 1069 283 86 40 chr15 87139468 87139818 -16355156 - MTEb LTR MaLR 0 379 14 2 1249 344 312 7 0 chr15 87139970 87140114 -16354860 + L1MEf LINE L1 2093 2237 -4005 2 1249 317 287 88 62 chr15 87140560 87140784 -16354190 - MTEb LTR MaLR -33 346 100 2 1249 258 32 0 0 chr15 87140899 87140930 -16354044 + (ATTG)n Simple_repeat Simple_repeat 2 32 0 2 1249 325 327 19 38 chr15 87141014 87141119 -16353855 - ID_B1 SINE B4 -118 106 4 2 1249 250 283 53 9 chr15 87141326 87141440 -16353534 + L1MEf LINE L1 4541 4659 -1487 2 1249 1028 241 64 111 chr15 87141454 87141880 -16353094 + MTD LTR MaLR 5 389 -30 2 1249 221 250 79 88 chr15 87142958 87143072 -16351902 + MIR SINE MIR 32 144 -118 2 1249 332 352 79 15 chr15 87144437 87144639 -16350335 + MER63C DNA AcHobo 637 851 -79 2 1249 608 289 49 44 chr15 87145119 87145322 -16349652 + B3 SINE B2 7 210 -6 2 1249 190 355 62 28 chr15 87145645 87145790 -16349184 + L2a LINE L2 3040 3189 -237 2 1249 197 321 71 27 chr15 87146873 87146985 -16347989 - MIRb SINE MIR -61 207 91 2 1249 811 75 8 8 chr15 87147556 87147677 -16347297 + (TAGA)n Simple_repeat Simple_repeat 1 121 0 2 1249 248 298 21 11 chr15 87148368 87148463 -16346511 + C-rich Low_complexity Low_complexity 4 99 0 2 1249 302 277 0 0 chr15 87148642 87148707 -16346267 - ID2 SINE ID -17 66 2 2 1249 473 258 0 10 chr15 87148888 87148986 -16345988 + RSINE1 SINE B4 8 104 -61 2 1249 232 328 120 34 chr15 87149117 87149325 -16345649 - RMER12 LTR ERVK -350 972 747 2 1249 312 280 103 38 chr15 87149439 87149598 -16345376 - LTR33A LTR ERVL -292 239 72 2 1249 697 222 22 62 chr15 87150475 87150653 -16344321 - B3A SINE B2 0 198 28 2 1249 214 179 237 70 chr15 87151338 87151452 -16343522 + B4 SINE B4 2 134 -158 2 1249 611 242 52 85 chr15 87154233 87154445 -16340529 - B3 SINE B2 -11 205 1 2 1249 236 243 181 75 chr15 87154772 87154932 -16340042 + MLT2C1 LTR ERVL 156 332 -65 2 1249 1029 109 0 0 chr15 87154950 87155207 -16339767 + (TG)n Simple_repeat Simple_repeat 1 257 0 2 1249 720 299 6 0 chr15 87155212 87155369 -16339605 - B3A SINE B2 -38 160 3 2 1249 237 98 0 0 chr15 87155432 87155473 -16339501 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 2 1249 361 122 13 13 chr15 87155473 87155548 -16339426 + (GGA)n Simple_repeat Simple_repeat 2 76 0 2 1249 538 259 35 14 chr15 87155560 87155705 -16339269 - RSINE1 SINE B4 -16 149 2 2 1249 3845 130 97 19 chr15 87155955 87156653 -16338321 + RMER6A LTR ERVK 3 755 -1 2 1249 252 43 0 61 chr15 87157820 87157869 -16337105 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 2 1249 1106 105 0 0 chr15 87157871 87158023 -16336951 - B2_Mm1t SINE B2 -5 188 37 2 1249 363 23 0 0 chr15 87158234 87158278 -16336696 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 1249 976 244 101 36 chr15 87158583 87158889 -16336085 + MTD LTR MaLR 5 330 -89 2 1249 276 30 0 0 chr15 87158892 87158925 -16336049 + (TCC)n Simple_repeat Simple_repeat 2 34 0 2 1249 244 361 9 0 chr15 87160606 87160714 -16334260 - MER2 DNA MER2_type -38 307 199 2 1249 204 246 15 15 chr15 87160988 87161155 -16333819 + CT-rich Low_complexity Low_complexity 1 167 0 2 1249 487 322 0 43 chr15 87161377 87161565 -16333409 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1249 240 233 0 0 chr15 87162097 87162170 -16332804 + (TA)n Simple_repeat Simple_repeat 1 73 0 2 1249 316 222 48 14 chr15 87162193 87162339 -16332635 + (TAGA)n Simple_repeat Simple_repeat 4 154 0 2 1250 189 0 0 0 chr15 87165206 87165227 -16329747 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2 1250 204 266 15 15 chr15 87169151 87169216 -16325758 + GA-rich Low_complexity Low_complexity 4 68 0 2 1250 322 219 0 27 chr15 87170619 87170694 -16324280 + MADE2 DNA Mariner 3 75 -5 2 1250 285 29 0 0 chr15 87172006 87172040 -16322934 + (CACCAT)n Simple_repeat Simple_repeat 4 37 0 2 1250 518 301 16 33 chr15 87172053 87172235 -16322739 + HAL1-2a_MD LINE L1 2326 2504 -520 2 1250 189 0 0 0 chr15 87172339 87172360 -16322614 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2 1250 1955 109 141 39 chr15 87174117 87174450 -16320524 - ORR1B2 LTR MaLR 0 367 1 2 1250 332 219 146 0 chr15 87174652 87174734 -16320240 + RSINE1 SINE B4 56 149 -16 2 1250 813 49 0 0 chr15 87174739 87174841 -16320133 + (CA)n Simple_repeat Simple_repeat 1 102 0 2 1250 294 340 52 10 chr15 87175222 87175415 -16319559 + L1ME1 LINE L1 5787 5987 -192 2 1250 538 314 110 25 chr15 87175760 87176077 -16318897 - MLT1C LTR MaLR -123 344 1 2 1250 227 275 8 0 chr15 87176783 87176903 -16318071 + (TGGA)n Simple_repeat Simple_repeat 1 121 0 2 1250 233 125 0 0 chr15 87176956 87177004 -16317970 + L1ME2z LINE L1 6271 6318 -126 2 1250 412 275 121 50 chr15 87177042 87177241 -16317733 + Lx8 LINE L1 7238 7450 -23 2 1250 2188 131 84 3 chr15 87178122 87178491 -16316483 + MTB_Mm LTR MaLR 1 399 -8 2 1250 253 398 6 0 chr15 87178769 87178935 -16316039 + (CA)n Simple_repeat Simple_repeat 2 168 0 2 1250 337 343 0 17 chr15 87178866 87179047 -16315927 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 2 1250 1762 288 81 21 chr15 87181429 87181989 -16312985 + Lx5 LINE L1 6455 7032 -18 2 1250 192 77 0 0 chr15 87182008 87182034 -16312940 + (TTAA)n Simple_repeat Simple_repeat 2 27 0 2 1250 628 236 171 6 chr15 87182776 87182969 -16312005 + B3A SINE B2 1 214 -2 2 1250 436 330 42 21 chr15 87183047 87183236 -16311738 + Tigger5 DNA MER2_type 2110 2302 -104 2 1250 207 0 0 0 chr15 87183342 87183365 -16311609 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1250 526 250 170 57 chr15 87183507 87183736 -16311238 + B4A SINE B4 36 290 -2 2 1250 189 0 0 0 chr15 87183777 87183798 -16311176 + (GA)n Simple_repeat Simple_repeat 2 22 0 2 1250 454 329 86 25 chr15 87183877 87184323 -16310651 + L1MC3 LINE L1 835 1393 -5358 2 1250 574 308 31 0 chr15 87184676 87184903 -16310071 + L1MC3 LINE L1 1800 2033 -4718 2 1250 342 0 0 0 chr15 87185009 87185047 -16309927 + (TGGA)n Simple_repeat Simple_repeat 1 38 0 2 1250 1928 252 45 52 chr15 87185398 87185500 -16309474 + L1MC3 LINE L1 2653 2743 -3821 2 1250 1235 265 65 15 chr15 87185500 87185899 -16309075 + MTD LTR MaLR 1 419 0 2 1250 1928 252 45 52 chr15 87185899 87186533 -16308441 + L1MC3 LINE L1 2744 3384 -3180 2 1250 509 320 135 68 chr15 87186587 87186990 -16307984 + L1MD LINE L1 2936 3370 -2776 2 1250 243 320 0 0 chr15 87187013 87187088 -16307886 + L1MD LINE L1 4097 4171 -1975 2 1250 319 272 84 33 chr15 87187299 87187512 -16307462 + L1MC3 LINE L1 4853 5076 -1488 2 1250 620 259 7 7 chr15 87187522 87187670 -16307304 + Lx9 LINE L1 7294 7441 -203 2 1250 1309 282 33 29 chr15 87187691 87188111 -16306863 + BGLII_B LTR ERVK 10 431 -10 2 1250 468 0 0 0 chr15 87188124 87188176 -16306798 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1250 874 160 14 0 chr15 87188279 87188423 -16306551 + URR1A DNA MER1_type 81 226 0 2 1250 612 273 34 11 chr15 87188571 87188749 -16306225 + B3A SINE B2 1 182 -16 2 1250 611 48 12 0 chr15 87188764 87188847 -16306127 + (TAGA)n Simple_repeat Simple_repeat 4 87 0 2 1250 802 276 110 25 chr15 87188885 87189330 -16305644 + L1MC3 LINE L1 5182 5664 -900 2 1250 593 317 173 28 chr15 87189406 87190023 -16304951 + L1MC3 LINE L1 5732 6438 -324 2 1250 453 315 56 6 chr15 87190185 87190364 -16304610 - L1MC LINE L1 -927 5219 5032 2 1250 261 0 0 0 chr15 87190588 87190617 -16304357 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1250 306 0 0 0 chr15 87190897 87190931 -16304043 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1250 635 198 17 17 chr15 87190937 87191055 -16303919 - RSINE1 SINE B4 -47 118 1 2 1250 264 324 40 0 chr15 87191202 87191276 -16303698 + ID4_ SINE ID 1 77 -6 2 1250 279 0 0 0 chr15 87191277 87191308 -16303666 + (TAAAA)n Simple_repeat Simple_repeat 5 35 0 2 1250 2235 163 20 23 chr15 87191360 87191755 -16303219 - ORR1B1 LTR MaLR 0 394 1 2 1250 687 224 0 0 chr15 87192382 87192666 -16302308 + (TGGG)n Simple_repeat Simple_repeat 1 284 0 2 1250 1950 209 60 5 chr15 87192806 87193069 -16301905 - MTD LTR MaLR -14 405 121 2 1250 405 0 0 0 chr15 87193069 87193114 -16301860 + (CAAT)n Simple_repeat Simple_repeat 3 47 0 2 1250 1950 209 60 5 chr15 87193114 87193230 -16301744 - MTD LTR MaLR -299 120 7 2 1250 215 305 28 9 chr15 87193268 87193374 -16301600 + (TGGA)n Simple_repeat Simple_repeat 1 108 0 2 1250 274 250 0 0 chr15 87193375 87193431 -16301543 - MTD LTR MaLR -210 209 154 2 1250 1925 165 37 6 chr15 87193469 87193817 -16301157 + RLTR15 LTR ERVK 1 359 0 2 1250 233 290 161 47 chr15 87193975 87194167 -16300807 - MLT1K LTR MaLR -10 585 372 2 1250 501 32 0 0 chr15 87194183 87194246 -16300728 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 2 1250 450 184 0 0 chr15 87194246 87194322 -16300652 - ID4_ SINE ID -6 77 2 2 1250 522 295 29 76 chr15 87194330 87194568 -16300406 + MER106A DNA MER1_type 6 232 -4 2 1250 1157 274 83 11 chr15 87195440 87195790 -16299184 - MTEa LTR MaLR 0 379 5 2 1250 659 284 101 11 chr15 87195882 87196249 -16298725 - Lx8 LINE L1 -23 7621 7095 2 1250 281 240 18 71 chr15 87196279 87196391 -16298583 - B3 SINE B2 -29 187 82 2 1250 625 310 6 0 chr15 87196588 87196746 -16298228 + RSINE1 SINE B4 6 164 -1 2 1250 272 183 14 0 chr15 87196749 87196782 -16298192 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1250 276 30 0 0 chr15 87196782 87196815 -16298159 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 1250 272 183 14 0 chr15 87196815 87196852 -16298122 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1250 240 279 79 32 chr15 87197328 87197454 -16297520 - L1MEg LINE L1 -4655 1429 1298 3 1250 194 91 30 0 chr15 87197603 87197636 -16297338 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 3 1250 231 232 42 28 chr15 87197646 87197717 -16297257 - RMER12 LTR ERVK -506 816 745 3 1250 1273 178 9 0 chr15 87197924 87198137 -16296837 - B3 SINE B2 -1 215 1 3 1250 323 301 86 104 chr15 87198168 87198620 -16296354 - L1MEg LINE L1 -5101 983 540 3 1250 216 141 14 72 chr15 87198779 87198848 -16296126 + (CAGG)n Simple_repeat Simple_repeat 3 67 0 3 1250 1013 284 107 19 chr15 87201935 87202254 -16292720 - MTE2b LTR MaLR -11 368 22 3 1250 2304 102 15 15 chr15 87202678 87203005 -16291969 - ORR1A2 LTR MaLR 0 327 1 3 1250 23 33 0 0 chr15 87203933 87203963 -16291011 + AT_rich Low_complexity Low_complexity 1 30 0 3 1250 835 283 29 19 chr15 87206808 87206838 -16288136 - B3 SINE B2 -5 211 186 3 1250 393 117 0 0 chr15 87206838 87206898 -16288076 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 1250 835 283 29 19 chr15 87206898 87207076 -16287898 - B3 SINE B2 -31 185 2 3 1250 25 0 0 0 chr15 87207158 87207183 -16287791 + AT_rich Low_complexity Low_complexity 1 25 0 3 1250 3689 241 93 18 chr15 87207184 87208206 -16286768 - Lx5 LINE L1 -44 7416 5953 3 1250 276 337 23 0 chr15 87208642 87208728 -16286246 - Lx8 LINE L1 -989 6484 6397 3 1250 495 73 0 0 chr15 87208740 87208808 -16286166 + (TCC)n Simple_repeat Simple_repeat 2 69 0 3 1250 1469 269 70 42 chr15 87208810 87209301 -16285673 + Lx8 LINE L1 6849 7330 -143 3 1250 180 0 0 0 chr15 87209301 87209321 -16285653 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3 1250 1469 269 70 42 chr15 87209321 87209400 -16285574 + Lx8 LINE L1 7331 7434 -39 3 1250 448 343 27 33 chr15 87209558 87209742 -16285232 + MTD LTR MaLR 6 188 -231 3 1250 1690 226 58 28 chr15 87210497 87210897 -16284077 - Lx5 LINE L1 0 7050 6639 3 1250 321 217 0 0 chr15 87213442 87213525 -16281449 + (TGGA)n Simple_repeat Simple_repeat 3 85 0 3 1250 21 0 0 0 chr15 87214347 87214368 -16280606 + AT_rich Low_complexity Low_complexity 1 21 0 3 1250 256 315 0 0 chr15 87214993 87215066 -16279908 - MTEb LTR MaLR -11 368 296 3 1250 283 325 26 9 chr15 87215082 87215197 -16279777 - L1M3 LINE L1 -410 5773 5657 3 1250 234 340 29 20 chr15 87215346 87215448 -16279526 - MTEb LTR MaLR -222 137 35 3 1250 779 293 126 11 chr15 87215464 87215837 -16279137 - L1MB3 LINE L1 -109 6074 5659 3 1250 362 228 25 12 chr15 87215926 87216006 -16278968 - B4 SINE B4 0 292 212 3 1250 374 222 156 0 chr15 87216048 87216138 -16278836 - RSINE1 SINE B4 -60 105 2 3 1250 620 320 61 40 chr15 87216138 87216363 -16278611 - B4A SINE B4 -62 230 1 3 1250 394 309 123 24 chr15 87219066 87219278 -16275696 - RMER15 LTR ERVL -68 507 275 3 1250 471 215 68 23 chr15 87219285 87219418 -16275556 - RMER15 LTR ERVL -436 139 1 3 1250 560 317 137 23 chr15 87219589 87220028 -16274946 - L1MB3 LINE L1 -16 6167 5679 3 1250 1517 174 11 19 chr15 87220250 87220514 -16274460 - ORR1B1 LTR MaLR 0 394 133 3 1250 831 21 0 0 chr15 87222236 87222333 -16272641 + (TC)n Simple_repeat Simple_repeat 2 98 0 3 1250 447 285 185 46 chr15 87222833 87223006 -16271968 - B3A SINE B2 0 198 2 3 1250 458 341 169 25 chr15 87223114 87223517 -16271457 - MER45R DNA Tip100 0 1581 1121 3 1250 508 335 0 6 chr15 87223790 87224020 -16270954 + (TG)n Simple_repeat Simple_repeat 1 228 0 3 1250 223 188 23 23 chr15 87224056 87224143 -16270831 + (TATG)n Simple_repeat Simple_repeat 4 90 0 3 1250 1043 297 70 22 chr15 87224242 87224687 -16270287 - MER45R DNA Tip100 -612 969 504 3 1250 195 100 0 0 chr15 87224748 87224778 -16270196 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1250 705 225 211 11 chr15 87225605 87225785 -16269189 + B3 SINE B2 1 216 0 3 1250 689 273 115 0 chr15 87225838 87226021 -16268953 + B3 SINE B2 5 208 -8 3 1250 5163 9 0 0 chr15 87226027 87226590 -16268384 + L1Md_T LINE L1 6019 6581 -1 3 1250 715 246 12 35 chr15 87226640 87226882 -16268092 + L1MA4 LINE L1 5565 5845 -455 3 1250 1857 144 107 17 chr15 87226910 87227074 -16267900 + ORR1C1 LTR MaLR 1 165 -213 3 1250 840 98 0 0 chr15 87227074 87227207 -16267767 + (TC)n Simple_repeat Simple_repeat 2 134 0 3 1250 1857 144 107 17 chr15 87227207 87227389 -16267585 + ORR1C1 LTR MaLR 166 377 -1 3 1250 442 57 14 14 chr15 87227415 87227486 -16267488 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 3 1250 1464 173 128 43 chr15 87227774 87228119 -16266855 + ORR1D1 LTR MaLR 1 374 0 3 1250 261 286 78 26 chr15 87228162 87228277 -16266697 + MLT1B LTR MaLR 243 363 -27 3 1250 735 213 33 44 chr15 87229876 87230058 -16264916 - B3 SINE B2 -32 184 5 3 1250 651 324 75 69 chr15 87230642 87231004 -16263970 + MTEa LTR MaLR 2 365 -14 3 1250 1936 107 145 6 chr15 87231175 87231486 -16263488 - ORR1B1 LTR MaLR 0 394 41 3 1250 197 65 32 0 chr15 87231693 87231724 -16263250 + (TTTG)n Simple_repeat Simple_repeat 3 34 0 3 1250 307 400 92 13 chr15 87231757 87231985 -16262989 + MLT1F2 LTR MaLR 90 335 -225 3 1250 1812 205 49 59 chr15 87232181 87232606 -16262368 - MTC LTR MaLR 0 421 1 3 1250 383 245 32 0 chr15 87236938 87237032 -16257942 - ERVL-int LTR ERVL -3683 2074 1978 3 1250 432 0 0 0 chr15 87237412 87237460 -16257514 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1250 498 116 33 40 chr15 87238525 87238677 -16256297 + (CAGAGA)n Simple_repeat Simple_repeat 4 154 0 3 1250 1212 55 7 0 chr15 87239274 87239419 -16255555 - B1_Mus2 SINE Alu 0 147 2 3 1250 874 255 91 105 chr15 87241703 87241979 -16252995 + B4 SINE B4 8 279 -13 3 1250 211 227 0 0 chr15 87242073 87242117 -16252857 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 3 1250 297 51 0 0 chr15 87243023 87243062 -16251912 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1250 294 349 80 35 chr15 87245669 87245957 -16249017 + L1MA9 LINE L1 5581 5881 -431 3 1250 212 175 0 0 chr15 87246012 87246052 -16248922 + A-rich Low_complexity Low_complexity 1 40 0 3 1250 262 261 86 11 chr15 87248228 87248321 -16246653 - L1MC1 LINE L1 -220 6113 6014 3 1250 342 0 0 0 chr15 87248438 87248476 -16246498 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1250 786 316 20 24 chr15 87248543 87248793 -16246181 - B4A SINE B4 -41 251 3 3 1250 506 279 148 6 chr15 87248799 87249092 -16245882 - L1MC1 LINE L1 -2173 5822 5478 3 1250 567 0 0 0 chr15 87249373 87249436 -16245538 + (TC)n Simple_repeat Simple_repeat 2 64 0 3 1250 370 359 16 11 chr15 87249450 87249636 -16245338 - Lx7 LINE L1 -565 7131 6945 3 1250 963 238 100 54 chr15 87249663 87250032 -16244942 - L1MC1 LINE L1 -819 5327 4942 3 1250 362 161 0 11 chr15 87251730 87251818 -16243156 + Lx4A LINE L1 6971 7057 -1 3 1250 758 368 33 11 chr15 87253441 87253713 -16241261 + B4A SINE B4 3 280 -12 3 1250 218 270 16 16 chr15 87253730 87253770 -16241204 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1250 348 43 0 0 chr15 87253770 87253816 -16241158 + (TCTCTG)n Simple_repeat Simple_repeat 3 48 0 3 1250 218 270 16 16 chr15 87253816 87253839 -16241135 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1250 1037 81 0 7 chr15 87253890 87254027 -16240947 - MTB LTR MaLR 0 400 265 3 1250 438 66 82 0 chr15 87254017 87254078 -16240896 - MTB LTR MaLR -337 70 5 3 1250 386 262 7 0 chr15 87254214 87254363 -16240611 + (TGGA)n Simple_repeat Simple_repeat 1 150 0 3 1250 320 297 7 0 chr15 87254424 87254572 -16240402 + (TGGA)n Simple_repeat Simple_repeat 1 149 0 3 1250 220 233 23 8 chr15 87257539 87257669 -16237305 + GA-rich Low_complexity Low_complexity 1 132 0 3 1250 203 311 14 0 chr15 87257682 87257756 -16237218 + GA-rich Low_complexity Low_complexity 2 76 0 3 1250 264 332 82 24 chr15 87258618 87258825 -16236149 + ORR1E LTR MaLR 140 358 -1 3 1250 514 306 87 15 chr15 87258869 87259065 -16235909 + B4 SINE B4 16 225 -67 3 1250 439 245 29 19 chr15 87259330 87259434 -16235540 - PB1D10 SINE Alu 0 117 13 3 1250 488 353 18 44 chr15 87259948 87260176 -16234798 - Lx5 LINE L1 -52 6998 6777 3 1250 1204 115 104 10 chr15 87260190 87260392 -16234582 - URR1A DNA MER1_type -1 225 5 3 1250 304 302 12 0 chr15 87260534 87260620 -16234354 - MLT1A LTR MaLR -22 352 266 3 1250 284 356 91 34 chr15 87262257 87262466 -16232508 - MIRc SINE MIR -13 255 35 3 1250 181 214 17 67 chr15 87263443 87263503 -16231471 + MIR SINE MIR 57 113 -149 3 1250 382 263 89 182 chr15 87264748 87265011 -16229963 + B4A SINE B4 39 272 -20 3 1250 375 41 0 0 chr15 87265018 87265067 -16229907 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1250 945 274 149 36 chr15 87265068 87265397 -16229577 + ORR1D2 LTR MaLR 5 370 0 3 1250 520 347 44 18 chr15 87265538 87265764 -16229210 - Lx8 LINE L1 -129 7344 7113 3 1250 301 309 41 62 chr15 87265954 87266099 -16228875 - L1MC3 LINE L1 -2 7958 7817 3 1250 821 245 101 5 chr15 87266541 87266758 -16228216 - Lx8 LINE L1 -143 7330 7093 3 1250 940 261 80 45 chr15 87266781 87267118 -16227856 - Lx8 LINE L1 -459 7014 6666 3 1250 230 284 0 22 chr15 87267110 87267200 -16227774 - L1MC3 LINE L1 -1819 6141 6054 3 1250 208 233 0 0 chr15 87267203 87267246 -16227728 + CT-rich Low_complexity Low_complexity 3 45 0 3 1250 674 305 112 46 chr15 87267589 87268428 -16226546 - L1MC3 LINE L1 -2270 5690 4792 3 1250 500 322 70 80 chr15 87268544 87268844 -16226130 - MER44A DNA MER2_type -1 338 42 3 1250 2185 153 3 8 chr15 87268850 87269205 -16225769 + ORR1B1 LTR MaLR 42 394 0 3 1250 310 313 110 12 chr15 87269439 87269882 -16225092 - L1MC3 LINE L1 -3761 2560 2073 3 1250 244 290 22 51 chr15 87270226 87270364 -16224610 - L1M2 LINE L1 -4288 2561 2428 3 1250 224 121 14 83 chr15 87270395 87270467 -16224507 + T-rich Low_complexity Low_complexity 2 68 0 3 1250 1240 48 0 0 chr15 87270469 87270616 -16224358 - B1_Mm SINE Alu 0 147 1 3 1250 260 188 15 30 chr15 87270656 87270722 -16224252 - L1MC3 LINE L1 -5029 1479 1415 3 1250 439 254 6 6 chr15 87270905 87271027 -16223947 - ID4_ SINE ID -23 129 8 3 1250 436 269 21 63 chr15 87271039 87271182 -16223792 - ID_B1 SINE B4 -7 217 81 3 1250 366 321 8 51 chr15 87271210 87271328 -16223646 - MTEa LTR MaLR -264 115 3 3 1250 332 342 57 19 chr15 87271503 87271661 -16223313 + MER70A LTR ERVL 288 451 -21 3 1250 1061 84 0 11 chr15 87271711 87271892 -16223082 + (TC)n Simple_repeat Simple_repeat 2 180 0 3 1250 263 276 81 20 chr15 87272236 87272384 -16222590 - L1MC3 LINE L1 -6342 166 10 3 1250 556 323 81 31 chr15 87272420 87272928 -16222046 - L1MC3 LINE L1 -39 7746 7214 3 1250 229 253 53 24 chr15 87273033 87273203 -16221771 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 3 1250 4989 87 12 19 chr15 87273272 87274018 -16220956 + RLTR22_Mur LTR ERVK 92 832 -1016 3 1250 412 281 80 66 chr15 87274233 87274446 -16220528 + RMER12 LTR ERVK 1101 1316 -6 3 1250 186 43 0 0 chr15 87274452 87274475 -16220499 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 4 1250 204 238 0 16 chr15 87274523 87274587 -16220387 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 4 1250 327 65 0 0 chr15 87274589 87274635 -16220339 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1250 245 158 0 34 chr15 87274650 87274709 -16220265 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 4 1250 274 248 53 9 chr15 87274712 87274826 -16220148 + (TAGA)n Simple_repeat Simple_repeat 1 119 0 4 1250 396 270 11 6 chr15 87274826 87275005 -16219969 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 1250 198 71 0 0 chr15 87275064 87275092 -16219882 + (TAGA)n Simple_repeat Simple_repeat 4 31 0 4 1250 221 265 10 19 chr15 87275116 87275220 -16219754 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 4 1250 208 82 39 58 chr15 87275260 87275312 -16219662 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 4 1250 322 241 46 46 chr15 87275340 87275427 -16219547 + ORR1E LTR MaLR 1 87 -272 4 1250 246 282 142 40 chr15 87275816 87275964 -16219010 + MLT1A LTR MaLR 197 359 -15 4 1250 312 222 0 0 chr15 87276093 87276165 -16218809 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 1250 407 320 94 80 chr15 87276187 87276462 -16218512 - B4 SINE B4 -12 280 2 4 1250 1192 196 4 4 chr15 87276873 87277099 -16217875 - URR1A DNA MER1_type 0 226 1 4 1250 307 324 79 66 chr15 87277111 87277352 -16217622 - L1MEc LINE L1 -4496 1904 1661 4 1250 746 279 50 111 chr15 87280090 87280494 -16214480 + MTE2a LTR MaLR 1 379 0 4 1250 2224 166 55 12 chr15 87282507 87282911 -16212063 + MTC LTR MaLR 1 421 0 4 1250 246 95 0 0 chr15 87283040 87283082 -16211892 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1250 450 0 0 0 chr15 87283082 87283131 -16211843 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 1250 1467 208 86 14 chr15 87283289 87283640 -16211334 + MTE2a LTR MaLR 1 376 -3 4 1250 267 103 0 0 chr15 87284511 87284550 -16210424 + (GAA)n Simple_repeat Simple_repeat 2 40 0 4 1250 327 256 67 0 chr15 87285491 87285581 -16209393 - MLT1B LTR MaLR -172 218 123 4 1250 542 312 7 0 chr15 87285856 87286000 -16208974 - RSINE1 SINE B4 -18 147 3 4 1250 420 181 14 0 chr15 87286092 87286164 -16208810 + B2_Mm2 SINE B2 5 77 -118 4 1250 423 0 0 0 chr15 87286285 87286332 -16208642 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1250 734 268 33 28 chr15 87286487 87286698 -16208276 + B3 SINE B2 4 215 -1 4 1250 687 304 49 23 chr15 87286885 87287148 -16207826 + B4 SINE B4 17 286 -6 4 1250 225 0 0 0 chr15 87287194 87287219 -16207755 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1250 1535 304 93 13 chr15 87287366 87287932 -16207042 - Lx8 LINE L1 -2 7471 6856 4 1250 600 14 0 0 chr15 87287932 87288001 -16206973 + (GA)n Simple_repeat Simple_repeat 2 70 0 4 1250 1535 304 93 13 chr15 87288001 87288045 -16206929 - Lx8 LINE L1 -618 6855 6812 4 1250 201 158 0 0 chr15 87288055 87288093 -16206881 + T-rich Low_complexity Low_complexity 3 40 0 4 1250 225 132 0 0 chr15 87288201 87288239 -16206735 + (A)n Simple_repeat Simple_repeat 1 38 0 4 1250 273 291 40 55 chr15 87288239 87288439 -16206535 - L1MC3 LINE L1 -56 7729 7533 4 1250 321 315 60 7 chr15 87288585 87288735 -16206239 - L1MC3 LINE L1 -307 7478 7321 4 1250 268 208 27 40 chr15 87288844 87288882 -16206092 - Lx8 LINE L1 -398 7075 7036 4 1250 510 70 0 0 chr15 87288882 87288953 -16206021 + (CA)n Simple_repeat Simple_repeat 1 71 0 4 1250 268 208 27 40 chr15 87288953 87288989 -16205985 - Lx8 LINE L1 -438 7035 7002 4 1250 339 250 32 114 chr15 87289095 87289253 -16205721 - L1MC3 LINE L1 -681 7104 6960 4 1250 1415 223 33 86 chr15 87289257 87289654 -16205320 - MTEa LTR MaLR -3 376 1 4 1250 493 359 51 51 chr15 87289654 87290103 -16204871 - L1MC3 LINE L1 -824 6961 6513 4 1250 246 62 0 0 chr15 87290129 87290161 -16204813 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 4 1250 1809 185 17 34 chr15 87290161 87290513 -16204461 - ORR1B2 LTR MaLR -17 350 5 4 1250 310 266 39 24 chr15 87290565 87290692 -16204282 - L1MC3 LINE L1 -1346 6439 6311 4 1250 273 262 23 33 chr15 87290743 87290839 -16204135 - L1M5 LINE L1 -1211 4935 4840 4 1250 996 236 0 69 chr15 87290896 87291128 -16203846 - B3 SINE B2 0 216 1 4 1250 855 29 0 0 chr15 87291616 87291718 -16203256 + (TC)n Simple_repeat Simple_repeat 1 102 0 4 1250 459 0 0 0 chr15 87291901 87291952 -16203022 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1250 2055 168 33 11 chr15 87291955 87292322 -16202652 + ORR1C1 LTR MaLR 4 378 0 4 1250 4265 196 256 19 chr15 87292322 87293542 -16201432 + ORR1C1-int LTR MaLR 1 1509 0 4 1250 2010 167 29 16 chr15 87293543 87293714 -16201260 + ORR1C1 LTR MaLR 3 170 -214 4 1250 712 39 30 45 chr15 87293714 87293848 -16201126 + (TCTCTG)n Simple_repeat Simple_repeat 2 133 0 4 156 2010 167 29 16 chr15 87293848 87294053 -16200921 + ORR1C1 LTR MaLR 171 383 -1 4 1251 308 354 127 52 chr15 87294541 87294982 -16199992 - L1M5 LINE L1 -3400 2746 2273 4 1251 190 283 41 61 chr15 87295098 87295196 -16199778 + MIRb SINE MIR 125 220 -48 4 1251 666 299 107 18 chr15 87295264 87295489 -16199485 + B4A SINE B4 1 245 -47 4 1251 591 15 0 0 chr15 87295535 87295603 -16199371 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 1251 278 305 98 38 chr15 87296026 87296159 -16198815 + L1M5 LINE L1 5417 5557 -567 4 1251 230 350 40 24 chr15 87297177 87297303 -16197671 - LTR83 LTR ERVL -492 288 161 4 1251 1512 68 16 0 chr15 87297462 87297653 -16197321 - B2_Mm2 SINE B2 -1 194 1 4 1251 459 0 0 0 chr15 87297989 87298040 -16196934 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 4 1251 699 196 0 0 chr15 87299118 87299261 -16195713 + GA-rich Low_complexity Low_complexity 3 145 0 4 1251 806 208 0 12 chr15 87300636 87300797 -16194177 + B3 SINE B2 1 159 -57 4 1251 275 169 0 14 chr15 87301090 87301162 -16193812 + (CCA)n Simple_repeat Simple_repeat 3 73 0 4 1251 2316 52 0 3 chr15 87301319 87301609 -16193365 - L1Md_F2 LINE L1 0 6582 6294 4 1251 963 191 27 50 chr15 87301616 87301836 -16193138 - B3 SINE B2 -1 215 1 4 1251 408 40 0 0 chr15 87302988 87303038 -16191936 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1251 233 365 89 11 chr15 87303090 87303270 -16191704 - MLT1C LTR MaLR -74 393 200 4 1251 509 260 19 0 chr15 87303869 87303973 -16191001 + RSINE1 SINE B4 3 108 -57 4 1251 207 0 0 0 chr15 87303988 87304011 -16190963 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1251 414 0 0 0 chr15 87304011 87304056 -16190918 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 1251 190 319 82 34 chr15 87304094 87304240 -16190734 + L4 LINE RTE 1808 1960 -69 4 1251 555 112 0 0 chr15 87304293 87304382 -16190592 + (TGGA)n Simple_repeat Simple_repeat 2 90 0 4 1251 298 300 32 32 chr15 87304420 87304575 -16190399 + (TGGA)n Simple_repeat Simple_repeat 4 158 0 4 1251 195 42 0 0 chr15 87304678 87304702 -16190272 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 4 1251 374 220 10 0 chr15 87304941 87305041 -16189933 + (TGGA)n Simple_repeat Simple_repeat 2 102 0 4 1251 24 53 0 0 chr15 87305145 87305183 -16189791 + AT_rich Low_complexity Low_complexity 1 38 0 4 1251 29 78 0 0 chr15 87305350 87305414 -16189560 + AT_rich Low_complexity Low_complexity 1 64 0 4 1251 344 281 78 17 chr15 87305417 87305533 -16189441 - B3A SINE B2 0 198 76 4 1251 337 296 101 50 chr15 87306151 87306350 -16188624 - MER58A DNA MER1_type -12 212 4 4 1251 572 240 152 23 chr15 87306424 87306723 -16188251 - ORR1D2 LTR MaLR 0 370 5 4 1251 857 181 106 32 chr15 87308008 87308196 -16186778 + B3 SINE B2 1 202 -14 4 1251 243 0 0 0 chr15 87308413 87308440 -16186534 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1251 469 283 0 24 chr15 87308464 87308587 -16186387 - B4A SINE B4 -68 224 105 4 1251 316 210 16 0 chr15 87308632 87308694 -16186280 + RMER30 DNA MER1_type 3 65 -137 4 1251 1228 223 32 16 chr15 87309087 87309333 -16185641 - MTD LTR MaLR 0 419 170 4 1251 1147 75 7 0 chr15 87309721 87309868 -16185106 + B1_Mus1 SINE Alu 1 148 0 4 1251 540 0 0 0 chr15 87309885 87309945 -16185029 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 4 1251 901 213 103 202 chr15 87310378 87310843 -16184131 - MTD LTR MaLR 0 419 1 4 1251 337 337 0 29 chr15 87312186 87312360 -16182614 + (TG)n Simple_repeat Simple_repeat 1 169 0 4 1251 256 269 19 0 chr15 87314987 87315039 -16179935 + ID4_ SINE ID 31 83 0 4 1251 966 96 18 18 chr15 87315139 87315478 -16179496 + (TAGA)n Simple_repeat Simple_repeat 1 339 0 4 1251 21 36 0 0 chr15 87315604 87315632 -16179342 + AT_rich Low_complexity Low_complexity 1 28 0 4 1251 275 284 45 9 chr15 87316747 87316857 -16178117 - L1M4 LINE L1 -381 5793 5680 4 1251 339 212 0 0 chr15 87318010 87318090 -16176884 + (TG)n Simple_repeat Simple_repeat 1 80 0 4 1251 201 195 24 0 chr15 87318106 87318147 -16176827 + (TATATG)n Simple_repeat Simple_repeat 1 42 0 4 1251 259 276 0 33 chr15 87321727 87321817 -16173157 + GA-rich Low_complexity Low_complexity 2 88 0 4 1251 594 304 82 88 chr15 87323285 87323638 -16171336 - MLT1B LTR MaLR -27 363 13 4 1251 207 0 0 0 chr15 87324063 87324086 -16170888 + (TCTG)n Simple_repeat Simple_repeat 1 23 0 4 1251 2091 146 17 102 chr15 87325008 87325428 -16169546 - ORR1C2 LTR MaLR 0 384 1 4 1251 381 129 0 0 chr15 87325732 87325802 -16169172 + (ATG)n Simple_repeat Simple_repeat 3 72 0 4 1251 4073 152 111 84 chr15 87326049 87326921 -16168053 - RMER19B LTR ERVK -6 896 1 4 1251 2412 58 58 3 chr15 87328795 87329105 -16165869 - ORR1A2 LTR MaLR 0 327 1 4 1251 195 42 0 0 chr15 87330356 87330380 -16164594 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 1251 219 221 11 23 chr15 87330547 87330635 -16164339 + GA-rich Low_complexity Low_complexity 1 87 0 4 1251 521 107 43 7 chr15 87330649 87330790 -16164184 + GA-rich Low_complexity Low_complexity 2 147 0 4 1251 482 305 79 51 chr15 87330900 87331114 -16163860 + RMER15-int LTR ERVL 193 412 -4587 4 1251 246 88 0 0 chr15 87331152 87331186 -16163788 + ORR1A4 LTR MaLR 294 327 -2 4 1251 1248 51 11 22 chr15 87331891 87332073 -16162901 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 1251 337 305 0 0 chr15 87332143 87332225 -16162749 - B3 SINE B2 -5 211 130 4 1251 1658 232 99 8 chr15 87332545 87332919 -16162055 + MTD LTR MaLR 12 419 0 4 1251 252 364 36 0 chr15 87333038 87333148 -16161826 + MLT1A1 LTR MaLR 1 114 -294 4 1251 200 128 0 25 chr15 87334887 87334927 -16160047 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 1251 647 293 120 39 chr15 87335331 87335640 -16159334 - MLT1B LTR MaLR -56 334 1 5 1251 252 0 0 0 chr15 87336602 87336630 -16158344 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1251 645 47 0 0 chr15 87336630 87336714 -16158260 + (GA)n Simple_repeat Simple_repeat 1 85 0 5 1251 691 320 44 28 chr15 87339583 87339943 -16155031 + ERVL-B4-int LTR ERVL 2718 3083 -2631 5 1251 370 314 13 79 chr15 87340094 87340246 -16154728 + MTD LTR MaLR 18 159 -260 5 1251 2393 166 68 40 chr15 87340267 87340813 -16154161 + RLTR31_Mm LTR ERVK 1 561 0 5 1251 698 249 95 35 chr15 87340819 87341019 -16153955 + MTD LTR MaLR 193 404 -15 5 1251 1010 291 132 36 chr15 87341034 87341668 -16153306 + ERVL-B4-int LTR ERVL 3305 3999 -1715 5 1251 1187 297 142 51 chr15 87341805 87342703 -16152271 + ERVL-B4-int LTR ERVL 4198 5177 -537 5 1251 23 80 0 13 chr15 87343616 87343646 -16151328 + AT_rich Low_complexity Low_complexity 1 30 0 5 1251 1177 54 0 13 chr15 87343646 87343796 -16151178 + B1_Mus1 SINE Alu 1 148 0 5 1251 23 80 0 13 chr15 87343796 87343841 -16151133 + AT_rich Low_complexity Low_complexity 1 45 0 5 1251 850 273 9 24 chr15 87343843 87344053 -16150921 - B3 SINE B2 -9 207 1 5 1251 186 222 120 40 chr15 87344116 87344191 -16150783 - MIRc SINE MIR -149 119 39 5 1251 225 0 0 0 chr15 87344614 87344639 -16150335 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 5 1251 644 258 60 5 chr15 87344657 87344875 -16150099 - L1M5 LINE L1 -942 5204 4975 5 1251 243 88 0 0 chr15 87344947 87344981 -16149993 + (TCTG)n Simple_repeat Simple_repeat 3 36 0 5 1251 2476 91 194 0 chr15 87344994 87345392 -16149582 - IAPLTR2_Mm LTR ERVK 0 475 1 5 1251 5768 47 4 19 chr15 87345394 87346149 -16148825 - IAPEz-int LTR ERVK -2 6479 5736 5 1251 2115 69 4 0 chr15 87346148 87346425 -16148549 - IAPEz-int LTR ERVK -4845 1636 1359 5 1251 3460 63 1 16 chr15 87346425 87347003 -16147971 - IAPEz-int LTR ERVK -5819 662 168 5 1251 234 267 0 0 chr15 87347003 87347048 -16147926 - RLTR27 LTR ERVK -34 275 231 5 1251 492 134 27 112 chr15 87347048 87347191 -16147783 - IAPEz-int LTR ERVK -6358 123 3 5 1251 2476 91 194 0 chr15 87347193 87347591 -16147383 - IAPLTR2_Mm LTR ERVK 0 475 1 5 1251 249 328 39 29 chr15 87347677 87347881 -16147093 - L1MC3 LINE L1 -221 7564 7359 5 1251 1006 239 88 33 chr15 87348284 87348556 -16146418 + B4 SINE B4 3 289 -3 5 1251 540 0 0 0 chr15 87348556 87348616 -16146358 + (GA)n Simple_repeat Simple_repeat 2 61 0 5 1251 281 335 20 7 chr15 87348641 87348791 -16146183 + L1MEc LINE L1 44 195 -6205 5 1251 970 283 73 57 chr15 87349073 87349672 -16145302 + L1MEc LINE L1 552 1160 -5240 5 1251 354 355 137 10 chr15 87349694 87349993 -16144981 + L1MEc LINE L1 1207 1543 -4857 5 1251 275 256 13 0 chr15 87350058 87350136 -16144838 + L1MEc LINE L1 1671 1749 -4651 5 1251 448 335 116 51 chr15 87350155 87350448 -16144526 + L1MEc LINE L1 4461 4772 -1547 5 1251 424 278 156 83 chr15 87350541 87350617 -16144357 + B4 SINE B4 1 74 -218 5 1251 234 0 0 0 chr15 87350617 87350643 -16144331 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 5 1251 424 278 156 83 chr15 87350643 87350758 -16144216 + B4 SINE B4 75 206 -86 5 1251 531 278 23 34 chr15 87350780 87350968 -16144006 + B3A SINE B2 36 216 0 5 1251 219 125 0 0 chr15 87351121 87351161 -16143813 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1251 340 167 50 0 chr15 87351490 87351550 -16143424 + ID4_ SINE ID 2 64 -19 5 1251 761 267 19 150 chr15 87351688 87351895 -16143079 - B3A SINE B2 -13 182 3 5 1251 318 307 114 10 chr15 87351901 87352102 -16142872 - L1MA6 LINE L1 0 6300 6079 5 1251 236 229 0 35 chr15 87352551 87352637 -16142337 + T-rich Low_complexity Low_complexity 3 85 0 5 1251 1175 233 140 16 chr15 87352820 87353025 -16141949 - RMER1C Other Other -2 1340 1099 5 1251 546 16 0 0 chr15 87353025 87353088 -16141886 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 1251 1175 233 140 16 chr15 87353088 87353261 -16141713 - RMER1C Other Other -244 1098 916 5 1251 614 247 180 30 chr15 87353347 87353647 -16141327 - RLTR15 LTR ERVK -14 345 1 5 1251 502 60 24 0 chr15 87353893 87353976 -16140998 + (CA)n Simple_repeat Simple_repeat 2 86 0 5 1251 677 271 94 35 chr15 87354715 87354971 -16140003 + B4A SINE B4 4 274 -18 5 1251 312 91 0 0 chr15 87355073 87355117 -16139857 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 5 1251 1125 43 0 0 chr15 87355367 87355506 -16139468 + (GGGAGA)n Simple_repeat Simple_repeat 6 144 0 5 1251 3335 55 5 2 chr15 87356015 87356418 -16138556 - MTB_Mm LTR MaLR 0 407 4 5 1251 498 212 72 86 chr15 87356433 87356572 -16138402 - B1_Mur1 SINE Alu -7 142 6 5 1251 963 122 0 45 chr15 87356682 87356836 -16138138 - B1_Mur3 SINE Alu -2 147 1 5 1251 794 235 111 11 chr15 87356849 87357038 -16137936 - B3 SINE B2 -5 211 4 5 1251 1236 55 0 0 chr15 87357101 87357247 -16137727 + B1_Mus1 SINE Alu 1 146 -2 5 1251 1020 126 19 86 chr15 87357615 87357629 -16137345 - B2_Mm2 SINE B2 0 195 183 5 1251 837 199 21 0 chr15 87357629 87357770 -16137204 - B1_Mur4 SINE Alu -6 144 1 5 1251 1020 126 19 86 chr15 87357770 87357790 -16137184 - B2_Mm2 SINE B2 -13 182 170 5 1251 279 0 0 0 chr15 87357790 87357821 -16137153 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 5 1251 1020 126 19 86 chr15 87357821 87357994 -16136980 - B2_Mm2 SINE B2 -26 169 1 5 1251 1218 61 0 0 chr15 87358152 87358299 -16136675 + B1_Mus1 SINE Alu 2 148 0 5 1251 279 0 0 0 chr15 87358299 87358330 -16136644 + (A)n Simple_repeat Simple_repeat 1 31 0 5 1251 379 311 14 22 chr15 87359027 87359165 -16135809 + CT-rich Low_complexity Low_complexity 5 141 0 5 1251 796 265 92 6 chr15 87360869 87361207 -16133767 + L1MEc LINE L1 739 1105 -5295 5 1251 509 276 78 18 chr15 87361209 87361375 -16133599 - Lx9 LINE L1 -670 6974 6799 5 1251 1024 282 130 25 chr15 87361393 87361832 -16133142 + Lx9 LINE L1 6831 7456 -188 5 1251 252 0 0 0 chr15 87361832 87361860 -16133114 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1251 562 336 136 21 chr15 87361860 87361995 -16132979 + Lx9 LINE L1 7335 7470 -3 5 1251 291 272 65 14 chr15 87362115 87362253 -16132721 + L1MEc LINE L1 1294 1438 -4962 5 1251 509 322 40 43 chr15 87362276 87362646 -16132328 - L1MA7 LINE L1 -392 5899 5531 5 1251 309 291 107 0 chr15 87363022 87363125 -16131849 + L1MEc LINE L1 1453 1566 -4834 5 1251 277 311 148 78 chr15 87363263 87363314 -16131660 + Lx8 LINE L1 7098 7160 -313 5 1251 1544 213 83 28 chr15 87363314 87363417 -16131557 + MTD LTR MaLR 1 106 -313 5 1251 282 56 0 0 chr15 87363417 87363453 -16131521 + (TTA)n Simple_repeat Simple_repeat 1 36 0 5 1251 1544 213 83 28 chr15 87363453 87363745 -16131229 + MTD LTR MaLR 107 417 -2 5 1251 277 311 148 78 chr15 87363745 87364038 -16130936 + Lx8 LINE L1 7161 7466 -7 5 1251 416 350 107 38 chr15 87364202 87364548 -16130426 + L1MEc LINE L1 2493 2863 -3456 5 1251 251 280 152 20 chr15 87364625 87364822 -16130152 + L1MEc LINE L1 2958 3180 -3139 5 1251 474 289 23 4 chr15 87364841 87365042 -16129932 + L1MEc LINE L1 4185 4388 -1931 5 1251 1080 248 47 93 chr15 87365191 87365617 -16129357 + MTE2a LTR MaLR 6 419 0 5 1251 595 293 84 49 chr15 87365830 87366056 -16128918 + B4A SINE B4 1 234 -58 5 1251 408 20 0 0 chr15 87366075 87366124 -16128850 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1251 228 283 54 11 chr15 87366246 87366339 -16128635 + L1MEc LINE L1 4950 5046 -1273 5 1251 486 0 0 0 chr15 87366373 87366427 -16128547 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 1251 603 261 24 30 chr15 87366696 87366741 -16128233 - B3A SINE B2 -2 196 155 5 1251 432 0 0 0 chr15 87366741 87366789 -16128185 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1251 603 261 24 30 chr15 87366789 87366909 -16128065 - B3A SINE B2 -44 154 32 5 1251 969 234 47 63 chr15 87367002 87367257 -16127717 - MTEa LTR MaLR -119 260 10 5 1251 1135 256 60 45 chr15 87367478 87367497 -16127477 + MLT2D LTR ERVL 10 30 -384 5 1251 1999 146 46 11 chr15 87367497 87367844 -16127130 + RLTR15 LTR ERVK 1 359 0 5 1251 1135 256 60 45 chr15 87367844 87368176 -16126798 + MLT2D LTR ERVL 31 366 -48 5 1251 519 138 0 0 chr15 87368402 87368489 -16126485 + (TCTCCC)n Simple_repeat Simple_repeat 5 91 0 5 1251 347 357 106 23 chr15 87368765 87369249 -16125725 + L1M5 LINE L1 5260 5802 -322 5 1251 193 162 54 0 chr15 87369518 87369555 -16125419 + MIR SINE MIR 36 74 -134 5 1251 1111 110 32 0 chr15 87370605 87370778 -16124196 - B2_Mm2 SINE B2 -9 186 9 5 1251 233 316 54 66 chr15 87371079 87371245 -16123729 - MLT1J-int LTR MaLR -705 682 519 5 1251 339 44 0 0 chr15 87371840 87371885 -16123089 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1251 1171 43 12 0 chr15 87371885 87372046 -16122928 + (GA)n Simple_repeat Simple_repeat 1 164 0 5 1251 782 212 72 77 chr15 87372174 87372383 -16122591 + B3 SINE B2 8 215 -1 5 1251 414 268 23 47 chr15 87373179 87373351 -16121623 + (TATG)n Simple_repeat Simple_repeat 4 171 0 5 1251 210 45 44 22 chr15 87374682 87374727 -16120247 + (CGCGG)n Simple_repeat Simple_repeat 2 47 0 5 1251 30 0 0 0 chr15 87374731 87374761 -16120213 + GC_rich Low_complexity Low_complexity 1 30 0 5 1251 432 67 0 0 chr15 87374761 87374821 -16120153 + (GGA)n Simple_repeat Simple_repeat 1 60 0 5 1251 23 33 0 0 chr15 87374847 87374877 -16120097 + GC_rich Low_complexity Low_complexity 1 30 0 5 1251 22 56 0 0 chr15 87375079 87375115 -16119859 + GC_rich Low_complexity Low_complexity 1 36 0 5 1251 224 234 125 45 chr15 87380114 87380226 -16114748 - L2b LINE L2 -46 3329 3209 5 1251 254 273 0 70 chr15 87380577 87380648 -16114326 + PB1D10 SINE Alu 45 110 -7 5 1251 327 266 25 12 chr15 87380649 87380729 -16114245 + ID4_ SINE ID 3 83 0 5 1251 764 143 13 13 chr15 87380742 87380898 -16114076 + GA-rich Low_complexity Low_complexity 5 160 0 5 1251 405 0 0 0 chr15 87382895 87382940 -16112034 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1251 190 164 16 32 chr15 87383044 87383079 -16111895 + (TCTCTG)n Simple_repeat Simple_repeat 5 40 0 5 1251 1270 34 0 0 chr15 87383079 87383226 -16111748 - B1_Mm SINE Alu 0 147 1 5 1251 190 164 16 32 chr15 87383226 87383253 -16111721 + (TCTCTG)n Simple_repeat Simple_repeat 4 28 0 5 1251 396 0 0 0 chr15 87383353 87383397 -16111577 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1251 193 299 62 49 chr15 87383768 87383849 -16111125 + MIRb SINE MIR 96 177 -91 5 1251 363 44 0 0 chr15 87385341 87385386 -16109588 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1251 24 0 0 0 chr15 87386045 87386069 -16108905 + AT_rich Low_complexity Low_complexity 1 24 0 5 1251 1380 152 4 35 chr15 87387573 87387805 -16107169 - URR1A DNA MER1_type -1 225 1 5 1251 231 36 0 0 chr15 87389683 87389711 -16105263 + (GGA)n Simple_repeat Simple_repeat 3 30 0 5 1251 207 139 127 0 chr15 87390826 87390905 -16104069 + (CTCA)n Simple_repeat Simple_repeat 2 90 0 5 1251 240 333 86 99 chr15 87391319 87391496 -16103478 - ORR1E LTR MaLR -5 354 185 5 1251 783 50 0 0 chr15 87391496 87391596 -16103378 + (GA)n Simple_repeat Simple_repeat 2 101 0 5 1251 240 333 86 99 chr15 87391596 87391661 -16103313 - ORR1E LTR MaLR -175 184 116 5 1251 244 284 68 0 chr15 87391725 87391813 -16103161 - ORR1E LTR MaLR -259 100 7 5 1251 792 153 0 0 chr15 87393298 87393435 -16101539 + GA-rich Low_complexity Low_complexity 1 137 0 5 1251 429 36 0 0 chr15 87396311 87396366 -16098608 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1251 564 15 0 0 chr15 87396477 87396542 -16098432 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1251 405 0 0 0 chr15 87396796 87396841 -16098133 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1251 600 290 0 0 chr15 87398601 87398746 -16096228 + RSINE1 SINE B4 11 155 -10 5 1251 1377 54 0 0 chr15 87398803 87399006 -16095968 + (GAA)n Simple_repeat Simple_repeat 1 203 0 5 1251 313 319 6 67 chr15 87402626 87402804 -16092170 + HAL1-2a_MD LINE L1 2342 2508 -516 6 1251 436 326 34 6 chr15 87402787 87402963 -16092011 + HAL1-2a_MD LINE L1 2350 2530 -494 6 1251 344 359 0 0 chr15 87402978 87403145 -16091829 + (CAT)n Simple_repeat Simple_repeat 3 169 0 6 1251 539 268 8 6 chr15 87403563 87403737 -16091237 - L1MD LINE L1 -534 5799 5629 6 1251 263 351 44 7 chr15 87404668 87404803 -16090171 - MER58B DNA MER1_type 0 341 202 6 1251 343 363 27 20 chr15 87404883 87405032 -16089942 + Tigger5 DNA MER2_type 40 189 -2217 6 1251 223 245 0 0 chr15 87407262 87407311 -16087663 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1251 298 290 16 8 chr15 87407543 87407668 -16087306 + (TG)n Simple_repeat Simple_repeat 1 126 0 6 1251 212 114 14 97 chr15 87407948 87408093 -16086881 + CT-rich Low_complexity Low_complexity 4 136 0 6 1251 349 116 0 94 chr15 87408107 87408288 -16086686 + CT-rich Low_complexity Low_complexity 1 164 0 6 1251 337 218 69 0 chr15 87408305 87408406 -16086568 + CT-rich Low_complexity Low_complexity 4 111 0 6 1251 1026 236 132 25 chr15 87409901 87410219 -16084755 - MTEa LTR MaLR -2 377 26 6 1251 243 0 0 0 chr15 87410880 87410907 -16084067 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1251 378 0 0 0 chr15 87412105 87412147 -16082827 + (TATG)n Simple_repeat Simple_repeat 1 42 0 6 1251 1347 75 0 0 chr15 87412147 87412460 -16082514 + (TGGA)n Simple_repeat Simple_repeat 1 313 0 6 1251 198 0 0 0 chr15 87413569 87413591 -16081383 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 1251 301 281 76 23 chr15 87414055 87414186 -16080788 + RMER15 LTR ERVL 380 517 -58 6 1251 2253 162 8 3 chr15 87416241 87416606 -16078368 - ORR1B2 LTR MaLR 0 367 1 6 1251 818 150 7 0 chr15 87417308 87417461 -16077513 + (TA)n Simple_repeat Simple_repeat 2 155 0 6 1251 1037 311 102 40 chr15 87419402 87419981 -16074993 - Lx8 LINE L1 -7 7466 6852 6 1251 184 321 61 12 chr15 87421803 87421885 -16073089 + L3 LINE CR1 796 881 -3608 6 1251 1697 176 6 56 chr15 87422527 87422887 -16072087 + RLTR15 LTR ERVK 1 342 -17 6 1252 471 224 0 31 chr15 87425036 87425197 -16069777 + (TATATG)n Simple_repeat Simple_repeat 3 158 0 6 1252 249 214 0 18 chr15 87425197 87425254 -16069720 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 1252 314 193 26 26 chr15 87425267 87425384 -16069590 + (TATATG)n Simple_repeat Simple_repeat 2 118 0 6 1252 239 225 0 14 chr15 87425448 87425520 -16069454 + (TA)n Simple_repeat Simple_repeat 2 72 0 6 1252 1039 252 156 31 chr15 87426195 87426522 -16068452 - ORR1D2 LTR MaLR 0 370 3 6 1252 210 186 0 23 chr15 87426614 87426658 -16068316 + L2c LINE L2 3332 3374 -13 6 1252 187 306 153 27 chr15 87428022 87428133 -16066841 + L2c LINE L2 3263 3387 0 6 1252 1496 217 116 3 chr15 87428650 87429020 -16065954 - MTD LTR MaLR -7 412 1 6 1252 188 289 0 19 chr15 87429816 87429869 -16065105 - MIRm SINE MIR -143 133 82 6 1252 415 145 24 0 chr15 87431835 87431918 -16063056 + CT-rich Low_complexity Low_complexity 2 86 0 6 1252 290 299 114 21 chr15 87434556 87434696 -16060278 - RMER15 LTR ERVL 0 575 423 6 1252 315 0 0 0 chr15 87436000 87436035 -16058939 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 1252 787 323 56 33 chr15 87438140 87438499 -16056475 + MLT1B LTR MaLR 4 370 -20 6 1252 229 320 20 30 chr15 87439643 87439743 -16055231 + MLT1A LTR MaLR 31 129 -245 6 1252 384 22 0 0 chr15 87441947 87441992 -16052982 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1252 343 296 262 0 chr15 87443087 87443259 -16051715 - RMER15 LTR ERVL -63 512 296 6 1252 262 250 29 108 chr15 87443304 87443443 -16051531 - RMER15 LTR ERVL -445 130 3 6 1252 480 35 0 0 chr15 87443452 87443510 -16051464 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 6 1252 195 204 0 0 chr15 87443547 87443596 -16051378 + (TGGA)n Simple_repeat Simple_repeat 4 52 0 6 1252 297 0 0 0 chr15 87443602 87443635 -16051339 + (ACTG)n Simple_repeat Simple_repeat 1 33 0 6 1252 419 220 26 18 chr15 87443684 87443921 -16051053 + (TGGA)n Simple_repeat Simple_repeat 1 239 0 6 1252 275 290 22 49 chr15 87443861 87444046 -16050928 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 6 1252 297 298 12 0 chr15 87443986 87444070 -16050904 + (TGGA)n Simple_repeat Simple_repeat 4 88 0 6 1252 409 274 18 9 chr15 87444173 87444287 -16050687 - B1F2 SINE Alu -34 115 1 6 1252 21 36 0 0 chr15 87444750 87444778 -16050196 + AT_rich Low_complexity Low_complexity 1 28 0 6 1252 1230 91 17 0 chr15 87444787 87444963 -16050011 + B2_Mm1t SINE B2 1 179 -14 6 1252 429 73 265 60 chr15 87445029 87445146 -16049828 + B2_Mm2 SINE B2 47 187 -8 6 1252 1024 258 122 18 chr15 87447766 87448101 -16046873 - MTEb LTR MaLR -7 372 3 6 1252 426 292 74 19 chr15 87448479 87448695 -16046279 - L1MA6 LINE L1 -279 6021 5794 6 1252 420 314 33 58 chr15 87448810 87449106 -16045868 - L1MA6 LINE L1 -518 5773 5494 6 1252 788 93 36 0 chr15 87449785 87449925 -16045049 + (TAGA)n Simple_repeat Simple_repeat 1 145 0 6 1252 279 0 0 0 chr15 87450327 87450358 -16044616 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 6 1252 205 219 40 27 chr15 87450358 87450433 -16044541 + (TATG)n Simple_repeat Simple_repeat 2 77 0 6 1252 340 271 71 45 chr15 87450447 87450559 -16044415 - B4A SINE B4 -1 291 177 6 1252 423 56 0 0 chr15 87451946 87452000 -16042974 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1252 1087 248 85 21 chr15 87452214 87452601 -16042373 - Charlie4a DNA MER1_type -23 485 74 6 1252 24 32 0 0 chr15 87455127 87455158 -16039816 + GC_rich Low_complexity Low_complexity 1 31 0 6 1252 183 167 0 0 chr15 87455270 87455312 -16039662 + (CGG)n Simple_repeat Simple_repeat 2 43 0 6 1252 24 32 0 0 chr15 87455438 87455469 -16039505 + GC_rich Low_complexity Low_complexity 1 31 0 6 1252 27 73 0 0 chr15 87455477 87455532 -16039442 + GC_rich Low_complexity Low_complexity 1 55 0 6 1252 181 127 55 0 chr15 87455589 87455644 -16039330 + C-rich Low_complexity Low_complexity 2 59 0 6 1252 459 0 0 0 chr15 87457253 87457304 -16037670 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1252 499 319 74 114 chr15 87459629 87459714 -16035260 - B4 SINE B4 -3 289 206 6 1252 798 31 0 0 chr15 87459714 87459811 -16035163 + (TC)n Simple_repeat Simple_repeat 2 98 0 6 1252 499 319 74 114 chr15 87459811 87460022 -16034952 - B4 SINE B4 -87 205 5 6 1252 180 0 0 0 chr15 87460039 87460059 -16034915 + (A)n Simple_repeat Simple_repeat 1 20 0 6 1252 845 129 0 67 chr15 87460067 87460216 -16034758 + B1_Mur3 SINE Alu 1 139 -10 6 1252 426 127 0 0 chr15 87460217 87460288 -16034686 + (CAATA)n Simple_repeat Simple_repeat 3 73 0 6 1252 527 234 230 17 chr15 87460384 87460562 -16034412 + B3 SINE B2 1 216 0 6 1252 238 175 0 100 chr15 87462138 87462208 -16032766 + L1MA4A LINE L1 6224 6286 -17 6 1252 289 250 33 50 chr15 87462614 87462795 -16032179 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 6 1252 412 59 0 29 chr15 87463106 87463176 -16031798 + (CA)n Simple_repeat Simple_repeat 1 68 0 6 1252 200 176 0 0 chr15 87463616 87463650 -16031324 + (TGG)n Simple_repeat Simple_repeat 1 34 0 6 1252 1957 197 40 2 chr15 87464798 87465195 -16029779 + MTD LTR MaLR 2 413 -6 6 1252 2798 229 155 97 chr15 87465201 87466387 -16028587 + MTD-int LTR MaLR 1 1255 -3 6 1252 1590 202 69 83 chr15 87466392 87466813 -16028161 + MTD LTR MaLR 3 417 -2 6 1252 1136 132 103 0 chr15 87468397 87468601 -16026373 - URR1A DNA MER1_type 0 226 2 6 1252 482 186 21 7 chr15 87469594 87469735 -16025239 + (TG)n Simple_repeat Simple_repeat 1 143 0 6 1252 370 158 67 0 chr15 87469782 87469946 -16025028 + (TG)n Simple_repeat Simple_repeat 1 175 0 6 1252 201 121 0 0 chr15 87469971 87470004 -16024970 + (TGG)n Simple_repeat Simple_repeat 3 35 0 6 1252 414 272 34 23 chr15 87470004 87470234 -16024740 + (TG)n Simple_repeat Simple_repeat 1 232 0 6 1252 304 243 54 45 chr15 87470547 87470659 -16024315 + MER113 DNA MER1_type 288 400 -121 6 1252 346 345 34 0 chr15 87471000 87471119 -16023855 - MLT1B LTR MaLR -12 378 256 6 1252 698 237 67 48 chr15 87472153 87472361 -16022613 - MTE2a LTR MaLR -167 212 1 6 1252 534 31 0 0 chr15 87473464 87473528 -16021446 + (CA)n Simple_repeat Simple_repeat 2 65 0 6 1252 635 173 7 0 chr15 87474295 87474434 -16020540 + (TGGA)n Simple_repeat Simple_repeat 2 141 0 6 1252 384 238 0 0 chr15 87474461 87474566 -16020408 + (TGGG)n Simple_repeat Simple_repeat 4 108 0 6 1252 180 0 0 0 chr15 87474704 87474724 -16020250 + (TCCC)n Simple_repeat Simple_repeat 3 22 0 6 1252 576 0 0 0 chr15 87476753 87476817 -16018157 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 1252 471 310 34 27 chr15 87476960 87477109 -16017865 - MLT2D LTR ERVL -238 176 27 6 1252 237 273 0 0 chr15 87478982 87479048 -16015926 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 1252 1038 268 32 32 chr15 87479054 87479332 -16015642 - B4A SINE B4 0 292 15 6 1252 212 257 43 0 chr15 87479360 87479430 -16015544 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 6 1252 1084 149 50 31 chr15 87480510 87480732 -16014242 + URR1A DNA MER1_type 1 226 0 6 1252 424 256 28 73 chr15 87480768 87480945 -16014029 - HAL1-2a_MD LINE L1 -517 2507 2339 6 1252 308 300 0 0 chr15 87480952 87481042 -16013932 + (ATGGTG)n Simple_repeat Simple_repeat 3 92 0 6 1252 447 324 11 23 chr15 87481044 87481218 -16013756 - HAL1-2a_MD LINE L1 -509 2515 2344 6 1252 219 193 17 50 chr15 87481221 87481281 -16013693 + (ATGGTG)n Simple_repeat Simple_repeat 6 63 0 6 1252 231 36 0 0 chr15 87482742 87482770 -16012204 + (TAA)n Simple_repeat Simple_repeat 2 29 0 6 1252 563 280 259 15 chr15 87487808 87488217 -16006757 - Lx9 LINE L1 -3 7641 7133 6 1252 186 71 0 0 chr15 87488242 87488270 -16006704 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 6 1252 1045 97 0 0 chr15 87488270 87488407 -16006567 - B1_Mus2 SINE Alu -8 139 3 6 1252 4662 52 16 10 chr15 87488419 87489035 -16005939 - L1Md_F2 LINE L1 0 6582 5963 6 1252 452 244 2 39 chr15 87490804 87490952 -16004022 - MTE2a LTR MaLR -7 372 226 6 1252 243 88 0 0 chr15 87493165 87493199 -16001775 + (TCCA)n Simple_repeat Simple_repeat 4 37 0 6 1252 219 357 20 0 chr15 87493233 87493331 -16001643 + (TCCA)n Simple_repeat Simple_repeat 4 103 0 6 1252 292 275 0 12 chr15 87493348 87493521 -16001453 + (TCCA)n Simple_repeat Simple_repeat 2 172 0 6 1252 404 244 8 0 chr15 87493584 87493711 -16001263 + (TCCA)n Simple_repeat Simple_repeat 4 131 0 6 1252 296 324 190 12 chr15 87494034 87494281 -16000693 - MLT2B3 LTR ERVL 0 554 264 6 1252 636 186 0 0 chr15 87495276 87495453 -15999521 + (CTGGGG)n Simple_repeat Simple_repeat 4 180 0 6 1252 261 197 0 0 chr15 87495472 87495548 -15999426 + (CTGGGG)n Simple_repeat Simple_repeat 5 80 0 6 1252 347 233 0 0 chr15 87495600 87495686 -15999288 + (CTGGGG)n Simple_repeat Simple_repeat 5 90 0 6 1252 1270 165 9 0 chr15 87495694 87495918 -15999056 - URR1A DNA MER1_type 0 226 1 6 1252 342 0 0 0 chr15 87496298 87496336 -15998638 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 7 1252 303 28 0 0 chr15 87496336 87496371 -15998603 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 1252 425 363 122 49 chr15 87496775 87497363 -15997611 - L1MC3 LINE L1 -12 7773 7143 7 1252 598 293 101 45 chr15 87497578 87498089 -15996885 - L1MC3 LINE L1 -1102 6893 6297 7 1252 673 312 79 26 chr15 87498274 87498804 -15996170 - L1MC3 LINE L1 -1784 6001 5444 7 1252 797 274 73 40 chr15 87498820 87499245 -15995729 - L1MC3 LINE L1 -766 5380 4942 7 1252 954 238 0 9 chr15 87501157 87501373 -15993601 + B3 SINE B2 1 214 -2 1 1252 372 226 37 19 chr15 87503705 87503813 -15991161 + RMER15 LTR ERVL 405 514 -61 2 1252 588 152 0 0 chr15 87505331 87505449 -15989525 + CT-rich Low_complexity Low_complexity 1 118 0 3 1252 423 0 0 0 chr15 87505478 87505525 -15989449 + (CATA)n Simple_repeat Simple_repeat 3 49 0 4 1252 252 287 41 30 chr15 87507131 87507300 -15987674 + (TATG)n Simple_repeat Simple_repeat 3 173 0 5 1252 300 53 0 0 chr15 87510212 87510250 -15984724 + (TCTG)n Simple_repeat Simple_repeat 1 38 0 6 1252 235 195 0 0 chr15 87513519 87513560 -15981414 + (TCCA)n Simple_repeat Simple_repeat 1 41 0 7 1252 366 308 134 24 chr15 87514957 87515286 -15979688 + L1M4 LINE L1 4814 5178 -968 8 1252 472 235 17 25 chr15 87515302 87515420 -15979554 + RSINE1 SINE B4 9 125 -40 9 1252 402 57 28 14 chr15 87515420 87515491 -15979483 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 1252 464 292 17 0 chr15 87515567 87515687 -15979287 + RSINE1 SINE B4 30 151 -14 1 1252 30 59 0 0 chr15 87515699 87515750 -15979224 + AT_rich Low_complexity Low_complexity 1 51 0 1 1252 199 191 32 0 chr15 87517825 87517888 -15977086 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 1252 492 220 44 41 chr15 87518646 87518808 -15976166 - MLT1A1 LTR MaLR -4 404 196 1 1252 263 298 35 12 chr15 87519117 87519202 -15975772 + MER63D DNA AcHobo 11 97 -964 1 1252 307 282 12 0 chr15 87519262 87519347 -15975627 + L1MC LINE L1 3079 3164 -2982 1 1252 298 323 120 16 chr15 87519407 87519715 -15975259 + L1M4 LINE L1 3257 3596 -2550 1 1252 704 319 104 78 chr15 87519754 87520176 -15974798 - MT2A LTR ERVL 0 533 101 1 1252 662 307 5 20 chr15 87520904 87521100 -15973874 + B4 SINE B4 94 286 -6 1 1252 355 299 46 9 chr15 87521163 87521271 -15973703 + PB1D10 SINE Alu 1 112 -5 2 1252 710 292 5 14 chr15 87524386 87524605 -15970369 + MER2 DNA MER2_type 87 303 -42 2 1252 775 256 269 11 chr15 87524707 87525146 -15969828 - RMER15 LTR ERVL -2 573 22 2 1252 366 329 97 8 chr15 87525657 87525960 -15969014 - L1M5 LINE L1 -444 5720 5394 2 1252 329 322 70 0 chr15 87528534 87528649 -15966325 + MLT1A0 LTR MaLR 211 333 -32 2 1252 186 424 8 0 chr15 87531119 87531237 -15963737 + MIR SINE MIR 31 149 -59 2 1252 205 305 0 0 chr15 87532493 87532552 -15962422 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1252 803 169 6 0 chr15 87537384 87537556 -15957418 + (TGGA)n Simple_repeat Simple_repeat 1 173 0 2 1252 262 231 66 36 chr15 87537655 87537821 -15957153 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 2 1252 999 144 0 0 chr15 87537833 87538000 -15956974 + (TGGA)n Simple_repeat Simple_repeat 4 170 0 2 1252 460 299 0 38 chr15 87541393 87541577 -15953397 + (ATGGTG)n Simple_repeat Simple_repeat 1 177 0 2 1252 508 290 25 13 chr15 87541612 87541769 -15953205 - HAL1-2a_MD LINE L1 -521 2503 2345 3 1252 1176 274 34 65 chr15 87543198 87543584 -15951390 - MTE2b LTR MaLR -5 374 1 3 1252 623 223 0 8 chr15 87543912 87544174 -15950800 + CT-rich Low_complexity Low_complexity 1 259 0 3 1252 324 0 0 0 chr15 87545365 87545401 -15949573 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1252 275 276 23 61 chr15 87546096 87546227 -15948747 + (CATG)n Simple_repeat Simple_repeat 1 126 0 3 1252 371 270 16 65 chr15 87546175 87546361 -15948613 + (TATG)n Simple_repeat Simple_repeat 2 178 0 3 1252 396 270 17 39 chr15 87546355 87546536 -15948438 + (TATATG)n Simple_repeat Simple_repeat 1 177 0 3 1252 519 95 0 0 chr15 87547373 87547447 -15947527 + (GA)n Simple_repeat Simple_repeat 1 74 0 3 1252 767 211 0 11 chr15 87548916 87549098 -15945876 + (TATG)n Simple_repeat Simple_repeat 1 180 0 3 1252 385 350 43 78 chr15 87549886 87550118 -15944856 - MTEa LTR MaLR -128 251 28 3 1252 343 263 73 29 chr15 87552993 87553130 -15941844 + MER112 DNA MER1_type 1 143 -118 4 1252 990 202 84 42 chr15 87554587 87554825 -15940149 + MTD LTR MaLR 24 271 -148 4 1252 258 106 0 0 chr15 87554879 87554926 -15940048 + (CAGA)n Simple_repeat Simple_repeat 4 50 0 4 1253 369 0 0 0 chr15 87556347 87556388 -15938586 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1253 2084 118 116 37 chr15 87559324 87559424 -15935550 - MTC LTR MaLR 0 421 322 4 1253 1674 166 321 69 chr15 87559424 87559467 -15935507 - MT2B LTR ERVL -1 600 554 4 1253 225 0 0 0 chr15 87559467 87559492 -15935482 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 1253 1674 166 321 69 chr15 87559492 87559927 -15935047 - MT2B LTR ERVL -48 553 1 4 1253 2084 118 116 37 chr15 87559927 87560206 -15934768 - MTC LTR MaLR -100 321 12 4 1253 236 306 0 12 chr15 87561995 87562081 -15932893 + L1M6 LINE L1 1148 1232 -5264 4 1253 213 364 0 11 chr15 87562701 87562790 -15932184 + B4A SINE B4 64 151 -141 4 1253 308 253 34 22 chr15 87562727 87562816 -15932158 + B1F2 SINE Alu 5 94 -55 4 1253 227 241 131 52 chr15 87563212 87563365 -15931609 + L1M6 LINE L1 2405 2569 -3851 4 1253 195 42 0 0 chr15 87564158 87564182 -15930792 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 5 1253 210 37 0 0 chr15 87564456 87564483 -15930491 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 5 1253 249 312 69 38 chr15 87566830 87566990 -15927984 + L1MB7 LINE L1 5606 5770 -408 5 1253 1751 165 65 0 chr15 87567084 87567393 -15927581 + ORR1B1 LTR MaLR 66 394 0 5 1253 245 263 151 8 chr15 87567450 87567569 -15927405 + L1MB7 LINE L1 5997 6132 -52 5 1253 260 188 42 0 chr15 87569283 87569331 -15925643 - MLT1C LTR MaLR 0 624 575 5 1253 253 329 45 0 chr15 87569487 87569642 -15925332 + (CATA)n Simple_repeat Simple_repeat 3 164 0 5 1253 276 152 24 71 chr15 87569678 87569763 -15925211 + T-rich Low_complexity Low_complexity 5 85 0 5 1253 4559 161 24 9 chr15 87569763 87570185 -15924789 - L1_Mur2 LINE L1 -1596 4281 3857 5 1253 507 17 0 0 chr15 87570185 87570245 -15924729 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 1253 4559 161 24 9 chr15 87570245 87570619 -15924355 - L1_Mur2 LINE L1 -2021 3856 3474 5 1253 648 324 66 57 chr15 87570878 87571212 -15923762 - MLT1C LTR MaLR -42 425 89 5 1253 228 313 31 93 chr15 87573278 87573400 -15921574 + CYRA11_Mm Unknown Y-chromosome 61 172 -445 5 1253 328 109 0 0 chr15 87573400 87573446 -15921528 - URR1B DNA MER1_type -2 223 178 6 1253 418 99 495 0 chr15 87573593 87573704 -15921270 - URR1B DNA MER1_type -60 165 1 6 1253 1202 267 29 109 chr15 87574826 87575238 -15919736 + MTE2a LTR MaLR 1 379 0 6 1253 225 94 0 0 chr15 87577871 87577903 -15917071 + (A)n Simple_repeat Simple_repeat 1 32 0 6 1253 813 107 0 0 chr15 87577995 87578117 -15916857 + (GAAA)n Simple_repeat Simple_repeat 4 125 0 6 1253 950 171 100 35 chr15 87578340 87578540 -15916434 - B3 SINE B2 -1 215 3 6 1253 552 194 19 0 chr15 87578655 87578758 -15916216 - B1_Mus2 SINE Alu 0 147 43 6 1253 248 244 20 118 chr15 87578675 87578777 -15916197 - RLTR25B LTR ERVK -506 522 431 6 1253 735 289 154 60 chr15 87579113 87579158 -15915816 - L1MA4A LINE L1 -367 5936 5897 6 1253 634 235 70 43 chr15 87579158 87579345 -15915629 - B3A SINE B2 -3 195 4 6 1253 735 289 154 60 chr15 87579345 87579465 -15915509 - L1MA4A LINE L1 -407 5896 5768 6 1253 765 31 0 0 chr15 87579465 87579561 -15915413 + (TG)n Simple_repeat Simple_repeat 1 96 0 6 1253 735 290 159 57 chr15 87579561 87579915 -15915059 - L1MA4A LINE L1 -536 5767 5306 6 1253 2619 119 63 2 chr15 87579915 87580312 -15914662 - MTC LTR MaLR 0 421 1 7 1253 313 302 198 35 chr15 87580312 87580350 -15914624 - L1MA4A LINE L1 -575 5305 5267 6 1253 198 0 0 0 chr15 87580350 87580372 -15914602 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 7 1253 483 270 154 25 chr15 87580372 87580664 -15914310 - L1MA4A LINE L1 -614 5266 4918 6 1253 983 257 131 38 chr15 87580673 87581206 -15913768 + L1M2 LINE L1 3152 3734 -2409 7 1253 25 0 0 0 chr15 87581209 87581234 -15913740 + AT_rich Low_complexity Low_complexity 1 25 0 7 1253 485 238 35 38 chr15 87581234 87581384 -15913590 - B3 SINE B2 0 198 37 7 1253 905 163 0 0 chr15 87581384 87581519 -15913455 - B1_Mus1 SINE Alu -12 136 2 7 1253 452 278 98 31 chr15 87581519 87581531 -15913443 - B3A SINE B2 -162 36 25 7 1253 772 255 209 6 chr15 87581531 87581862 -15913112 + L1_Mur3 LINE L1 3707 4104 -1776 7 1253 1554 226 38 38 chr15 87581880 87582248 -15912726 - RLTR20A LTR ERVK 0 541 174 7 1253 440 118 0 14 chr15 87582248 87582317 -15912657 - RLTR20A LTR ERVK -473 68 1 7 1253 1909 187 75 3 chr15 87582323 87582698 -15912276 - MTD LTR MaLR -15 404 3 7 1253 720 292 94 70 chr15 87582701 87583231 -15911743 + L1_Mur3 LINE L1 4104 4646 -1234 7 1253 769 183 0 7 chr15 87583233 87583376 -15911598 - RLTR26 LTR ERVK 0 642 501 7 1253 2156 161 254 7 chr15 87583373 87583809 -15911165 - RLTR26 LTR ERVK -98 544 1 7 1253 538 303 120 27 chr15 87583809 87584067 -15910907 + L1M2 LINE L1 4674 4955 -1188 7 1253 426 20 0 0 chr15 87586912 87586963 -15908011 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1253 786 228 64 5 chr15 87590735 87590938 -15904036 - RMER15 LTR ERVL -40 535 321 8 1253 24 0 0 0 chr15 87592346 87592370 -15902604 + GC_rich Low_complexity Low_complexity 1 24 0 8 1253 271 235 58 14 chr15 87592791 87592860 -15902114 - MTE2a LTR MaLR -307 72 1 8 1253 311 282 25 13 chr15 87593344 87593423 -15901551 - RMER12 LTR ERVK -142 1180 1101 8 1253 3356 161 44 15 chr15 87593543 87594212 -15900762 - RLTR22_Mur LTR ERVK -997 851 170 8 1253 248 222 37 0 chr15 87594714 87594822 -15900152 + (CA)n Simple_repeat Simple_repeat 1 112 0 8 1253 935 292 67 4 chr15 87596976 87597244 -15897730 + B4A SINE B4 2 286 -6 8 1253 360 0 0 0 chr15 87597466 87597506 -15897468 + (TA)n Simple_repeat Simple_repeat 2 41 0 8 1253 844 307 70 32 chr15 87597520 87598177 -15896797 + L1MEf LINE L1 884 1565 -4635 8 1253 441 300 147 19 chr15 87598209 87598467 -15896507 + L1MEf LINE L1 1682 1972 -4228 8 1253 3642 275 51 68 chr15 87598795 87599779 -15895195 + Lx8 LINE L1 6129 7109 -364 9 1253 1142 55 7 7 chr15 87599779 87599926 -15895048 + B1_Mm SINE Alu 1 147 0 9 1253 3642 275 51 68 chr15 87599926 87600309 -15894665 + Lx8 LINE L1 7110 7473 0 9 1253 1558 297 71 20 chr15 87600453 87601298 -15893676 + L1M2 LINE L1 2270 3157 -2986 9 1253 249 275 61 24 chr15 87601456 87601538 -15893436 + ORR1E LTR MaLR 9 93 -266 9 1253 1426 214 90 45 chr15 87601552 87602048 -15892926 - RMER4B LTR ERVK -9 576 17 9 1253 366 259 84 0 chr15 87602422 87602565 -15892409 + L1M2 LINE L1 3319 3473 -2670 9 1253 725 42 0 20 chr15 87602642 87602740 -15892234 + (TTTTC)n Simple_repeat Simple_repeat 5 100 0 9 1253 227 278 101 20 chr15 87602788 87602887 -15892087 - B1F SINE Alu -3 146 40 9 1253 2226 295 60 53 chr15 87602970 87603544 -15891430 + L1M2 LINE L1 3624 4220 -1923 9 1253 540 0 0 0 chr15 87603544 87603604 -15891370 + (TA)n Simple_repeat Simple_repeat 1 60 0 9 1253 2226 295 60 53 chr15 87603604 87604094 -15890880 + L1M2 LINE L1 4221 4696 -1447 9 1253 583 250 89 37 chr15 87604104 87604295 -15890679 + Lx8 LINE L1 7271 7471 -2 9 1253 508 284 23 0 chr15 87604329 87604505 -15890469 + L1M2 LINE L1 4726 4905 -1238 9 1253 627 217 17 0 chr15 87604517 87604637 -15890337 - B3 SINE B2 0 216 95 9 1253 308 345 107 53 chr15 87604670 87604740 -15890234 + L1M4 LINE L1 5286 5350 -828 1 1253 4080 38 0 0 chr15 87604740 87605215 -15889759 - L1Md_F2 LINE L1 -12 6570 6096 1 1253 308 345 107 53 chr15 87605215 87605407 -15889567 + L1M4 LINE L1 5351 5562 -616 1 1253 1516 220 118 3 chr15 87605489 87605845 -15889129 + MTD LTR MaLR 21 417 -2 1 1253 582 287 6 23 chr15 87607001 87607172 -15887802 - B3A SINE B2 0 198 31 1 1253 327 361 56 71 chr15 87607494 87608084 -15886890 - L1MEf LINE L1 -4452 1748 1168 1 1253 766 277 21 16 chr15 87608271 87608292 -15886682 - B3A SINE B2 -9 189 171 1 1253 579 15 0 0 chr15 87608292 87608360 -15886614 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 1253 766 277 21 16 chr15 87608360 87608525 -15886449 - B3A SINE B2 -28 170 2 1 1253 424 342 70 11 chr15 87608987 87609274 -15885700 - L1M5 LINE L1 -2312 3834 3531 1 1253 307 307 63 63 chr15 87609318 87609509 -15885465 - L1M5 LINE L1 -2644 3502 3312 1 1253 486 49 0 0 chr15 87610840 87610901 -15884073 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 1253 298 381 19 6 chr15 87611005 87611161 -15883813 - L1M7 LINE L1 -4664 1554 1397 1 1253 220 328 0 29 chr15 87611893 87612031 -15882943 + (TCTG)n Simple_repeat Simple_repeat 1 134 0 1 1253 2332 155 38 107 chr15 87613343 87613849 -15881125 + RMER15 LTR ERVL 76 546 -29 1 1253 438 250 0 50 chr15 87614791 87614890 -15880084 - B4A SINE B4 0 292 199 1 1253 2112 195 43 3 chr15 87614890 87615281 -15879693 - MTC LTR MaLR 0 421 15 1 1253 1496 79 16 0 chr15 87615295 87615485 -15879489 + B2_Mm2 SINE B2 1 193 -2 1 1253 590 337 27 5 chr15 87615495 87615683 -15879291 - B4A SINE B4 -94 198 7 1 1253 394 235 58 16 chr15 87615947 87616068 -15878906 + PB1 SINE Alu 2 127 0 1 1253 1017 199 33 19 chr15 87616085 87616295 -15878679 - B3 SINE B2 0 216 4 1 1253 270 303 110 0 chr15 87616424 87616533 -15878441 - Tigger7 DNA MER2_type -91 2400 2280 1 1253 378 286 31 0 chr15 87616535 87616633 -15878341 - Tigger7 DNA MER2_type -2373 118 18 1 1253 188 309 36 0 chr15 87616812 87616867 -15878107 + L2a LINE L2 3367 3423 -3 1 1253 467 300 36 106 chr15 87617102 87617404 -15877570 - L1M5 LINE L1 -474 5650 5370 1 1253 24 32 0 0 chr15 87617955 87617986 -15876988 + AT_rich Low_complexity Low_complexity 1 31 0 1 1253 2483 83 0 58 chr15 87618435 87618782 -15876192 + ORR1A2 LTR MaLR 1 327 0 1 1253 293 234 62 31 chr15 87620615 87620712 -15874262 - L1MC3 LINE L1 0 7785 7686 1 1253 405 307 58 89 chr15 87621077 87621424 -15873550 - L1MC3 LINE L1 -588 7197 6862 1 1253 249 214 8 53 chr15 87621425 87621558 -15873416 + (TATG)n Simple_repeat Simple_repeat 4 130 0 1 1253 295 125 33 43 chr15 87622304 87622396 -15872578 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 1 1253 385 264 6 136 chr15 87622739 87622766 -15872208 + ID_B1 SINE B4 70 210 -14 1 1253 513 228 15 89 chr15 87622766 87622901 -15872073 + B1F SINE Alu 11 135 -14 1 1253 1263 88 0 0 chr15 87624507 87624724 -15870250 + (TC)n Simple_repeat Simple_repeat 1 217 0 1 1253 486 0 0 0 chr15 87624724 87624778 -15870196 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1253 708 186 140 18 chr15 87624848 87625012 -15869962 + URR1A DNA MER1_type 1 184 -42 1 1253 386 265 186 49 chr15 87625179 87625485 -15869489 - Tigger6a DNA MER2_type -627 456 109 1 1253 211 278 19 0 chr15 87628339 87628393 -15866581 - L2a LINE L2 -1 3425 3371 1 1253 551 71 0 12 chr15 87629220 87629306 -15865668 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 1 1253 759 105 47 30 chr15 87630163 87630400 -15864574 + (TCTA)n Simple_repeat Simple_repeat 1 241 0 1 1253 329 326 39 55 chr15 87630451 87630633 -15864341 - MER63C DNA AcHobo -108 822 644 1 1253 319 269 125 0 chr15 87630647 87630751 -15864223 - MER63C DNA AcHobo -236 694 578 1 1253 291 216 21 83 chr15 87631084 87631180 -15863794 + MLT1A1 LTR MaLR 311 400 -8 1 1253 2044 231 69 30 chr15 87631510 87632134 -15862840 + L1_Mur3 LINE L1 4091 4738 -1142 1 1253 309 327 35 58 chr15 87632423 87632595 -15862379 - L1MD LINE L1 -2201 3945 3778 1 1253 1155 237 56 125 chr15 87633067 87633458 -15861516 + MTE2a LTR MaLR 1 364 -15 1 1253 1155 302 25 30 chr15 87633544 87633742 -15861232 - Lx7 LINE L1 -1747 5949 5715 1 1253 189 0 0 0 chr15 87633742 87633763 -15861211 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 1253 315 0 0 0 chr15 87633763 87633797 -15861177 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1253 1155 299 25 35 chr15 87633797 87634181 -15860793 - Lx7 LINE L1 -133 5714 5333 1 1253 1034 258 24 35 chr15 87634367 87634656 -15860318 - B4A SINE B4 -5 287 2 1 1253 1230 62 0 0 chr15 87635171 87635348 -15859626 + (TC)n Simple_repeat Simple_repeat 2 178 0 1 1253 3454 25 5 0 chr15 87635348 87635741 -15859233 + MTA_Mm LTR MaLR 2 396 0 1 1253 454 261 100 103 chr15 87636475 87636766 -15858208 + B4A SINE B4 3 292 0 1 1253 402 21 0 0 chr15 87636826 87636873 -15858101 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1253 432 0 0 0 chr15 87636873 87636921 -15858053 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1253 330 26 0 0 chr15 87637464 87637503 -15857471 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1253 4226 166 93 46 chr15 87638595 87639457 -15855517 + RMER19B LTR ERVK 1 902 0 1 1253 217 347 92 13 chr15 87640994 87641146 -15853828 + MIRb SINE MIR 43 206 -62 1 1253 817 10 10 10 chr15 87642043 87642146 -15852828 + (CA)n Simple_repeat Simple_repeat 1 103 0 1 1253 311 340 9 37 chr15 87642168 87642275 -15852699 + PB1D10 SINE Alu 2 105 -12 1 1253 654 13 0 0 chr15 87644413 87644488 -15850486 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 1253 396 0 0 0 chr15 87644824 87644868 -15850106 + (TCC)n Simple_repeat Simple_repeat 1 44 0 1 1253 347 125 18 0 chr15 87646809 87646865 -15848109 - HAL1-3A_ME LINE L1 -826 2032 1976 1 1253 188 233 0 14 chr15 87646870 87646944 -15848030 + (TATG)n Simple_repeat Simple_repeat 4 76 0 1 1253 486 281 6 64 chr15 87646945 87646999 -15847975 - B3A SINE B2 -2 214 163 1 1253 291 28 0 0 chr15 87646999 87647035 -15847939 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1253 486 301 0 22 chr15 87647035 87647154 -15847820 - B3A SINE B2 -30 168 53 1 1253 261 0 0 0 chr15 87648347 87648376 -15846598 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 1253 356 213 40 0 chr15 87648791 87648866 -15846108 - MTE2a LTR MaLR -6 373 296 1 1253 1338 118 52 33 chr15 87649756 87649967 -15845007 + URR1B DNA MER1_type 1 215 -10 1 1253 840 148 12 6 chr15 87651770 87651940 -15843034 + (TGGA)n Simple_repeat Simple_repeat 2 172 0 1 1253 1936 141 131 6 chr15 87652008 87652358 -15842616 - ORR1B1 LTR MaLR 0 394 1 1 1253 203 290 0 68 chr15 87653935 87654009 -15840965 + polypyrimidine Low_complexity Low_complexity 2 70 0 1 1253 405 0 0 0 chr15 87654942 87654987 -15839987 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1253 363 73 0 0 chr15 87654988 87655043 -15839931 + (CAGA)n Simple_repeat Simple_repeat 2 56 0 1 1253 610 226 165 35 chr15 87655432 87655602 -15839372 - B3 SINE B2 -23 193 2 1 1253 183 156 0 0 chr15 87656452 87656484 -15838490 + GA-rich Low_complexity Low_complexity 3 34 0 1 1253 1133 103 34 25 chr15 87656796 87657118 -15837856 + (TCTA)n Simple_repeat Simple_repeat 1 325 0 1 1253 261 256 107 15 chr15 87657269 87657400 -15837574 - L1MCa LINE L1 -4648 1860 1718 1 1253 444 37 0 0 chr15 87657566 87657620 -15837354 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1253 270 286 112 8 chr15 87657681 87657815 -15837159 - L1MB2 LINE L1 -7 6176 6029 1 1253 519 17 0 0 chr15 87658034 87658094 -15836880 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 1 1253 1395 278 48 22 chr15 87658154 87658651 -15836323 - L1MB2 LINE L1 -218 5953 5444 1 1253 583 255 194 20 chr15 87658821 87659069 -15835905 - Lx8 LINE L1 -181 7292 7002 1 1253 948 202 149 18 chr15 87659077 87659377 -15835597 - MT2B LTR ERVL 0 601 94 1 1253 473 264 0 39 chr15 87659415 87659545 -15835429 - MT2B LTR ERVL -405 128 4 1 1253 526 298 16 55 chr15 87659553 87659750 -15835224 - Lx8 LINE L1 -517 7127 6749 1 1253 495 313 67 62 chr15 87659762 87660167 -15834807 - L1M3 LINE L1 -849 5297 4891 1 1253 1134 274 101 29 chr15 87660174 87660338 -15834636 - L1M3 LINE L1 -1975 4165 4000 1 1253 1687 142 57 69 chr15 87660338 87660453 -15834521 + ORR1A4 LTR MaLR 1 111 -218 1 1253 558 0 0 0 chr15 87660453 87660515 -15834459 + (TCC)n Simple_repeat Simple_repeat 1 62 0 1 1253 1687 142 57 69 chr15 87660515 87660732 -15834242 + ORR1A4 LTR MaLR 112 329 0 1 1253 1134 274 101 29 chr15 87660732 87661083 -15833891 - L1M3 LINE L1 -2141 3999 3613 1 1253 1728 286 75 52 chr15 87661092 87662099 -15832875 - L1MCa LINE L1 -4675 1727 635 1 1253 335 288 52 68 chr15 87662144 87662411 -15832563 + L1MC LINE L1 5430 5696 -637 1 1253 192 97 0 0 chr15 87662481 87662512 -15832462 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1253 246 62 0 0 chr15 87662513 87662545 -15832429 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 1253 198 67 67 0 chr15 87662726 87662771 -15832203 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 1 1253 771 218 85 14 chr15 87664190 87664428 -15830546 + L1MA4 LINE L1 5623 5884 -416 1 1253 818 174 6 0 chr15 87665151 87665323 -15829651 + (TCCA)n Simple_repeat Simple_repeat 1 173 0 1 1253 2100 156 47 8 chr15 87665416 87665778 -15829196 + ORR1C1 LTR MaLR 1 376 -2 1 1253 716 304 78 8 chr15 87666496 87666741 -15828233 - MER2 DNA MER2_type -2 343 82 1 1253 598 249 160 26 chr15 87666784 87667015 -15827959 - Lx8 LINE L1 0 7473 7212 1 1253 867 248 103 19 chr15 87667105 87667368 -15827606 + B4 SINE B4 2 286 -6 1 1253 240 0 75 0 chr15 87667392 87667432 -15827542 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1253 487 282 97 51 chr15 87668015 87668232 -15826742 + RMER15 LTR ERVL 336 562 -13 1 1253 261 0 0 0 chr15 87668574 87668603 -15826371 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 1253 327 203 0 0 chr15 87669793 87669867 -15825107 + (TATG)n Simple_repeat Simple_repeat 4 77 0 1 1253 248 120 62 42 chr15 87669868 87669880 -15825094 + (TA)n Simple_repeat Simple_repeat 1 12 0 1 1253 1081 255 0 0 chr15 87669880 87670092 -15824882 + B3 SINE B2 3 214 -2 1 1253 248 120 62 42 chr15 87670092 87670175 -15824799 + (TA)n Simple_repeat Simple_repeat 1 86 0 1 1253 249 147 43 14 chr15 87670105 87670174 -15824800 + (TTATA)n Simple_repeat Simple_repeat 5 75 0 1 1253 364 101 29 52 chr15 87670186 87670322 -15824652 + (TA)n Simple_repeat Simple_repeat 2 134 0 1 1253 258 198 30 30 chr15 87670384 87670483 -15824491 + (TATAA)n Simple_repeat Simple_repeat 5 103 0 1 1253 206 130 43 51 chr15 87670485 87670623 -15824351 + (TA)n Simple_repeat Simple_repeat 2 138 0 2 1253 811 316 39 3 chr15 87671701 87672057 -15822917 + L1M2 LINE L1 4334 4702 -1441 2 1253 1898 169 136 112 chr15 87672057 87672220 -15822754 - RLTR11A2 LTR ERVK 0 527 368 2 1253 1347 101 6 0 chr15 87672220 87672399 -15822575 + B2_Mm2 SINE B2 2 181 -14 2 1253 1898 169 136 112 chr15 87672399 87672735 -15822239 - RLTR11A2 LTR ERVK -160 367 16 2 1253 418 308 111 25 chr15 87672743 87672986 -15821988 + L1M2 LINE L1 4697 4960 -1183 2 1253 260 173 36 24 chr15 87673009 87673092 -15821882 + CT-rich Low_complexity Low_complexity 6 89 0 2 1253 420 289 96 0 chr15 87673167 87673364 -15821610 - B3 SINE B2 0 216 1 2 1253 369 0 0 0 chr15 87673695 87673736 -15821238 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1253 356 210 14 14 chr15 87673756 87673851 -15821123 + Lx7 LINE L1 6596 6690 -783 2 1253 399 41 0 0 chr15 87676076 87676125 -15818849 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1253 597 118 17 8 chr15 87676133 87676253 -15818721 + (GGAA)n Simple_repeat Simple_repeat 2 122 0 2 1253 501 157 42 21 chr15 87676812 87676955 -15818019 + C-rich Low_complexity Low_complexity 1 146 0 2 1253 716 280 11 6 chr15 87677125 87677301 -15817673 - MER2 DNA MER2_type -31 314 138 2 1253 255 304 15 0 chr15 87677576 87677709 -15817265 - L1MC LINE L1 -2530 3616 3482 2 1253 763 265 22 11 chr15 87677728 87677911 -15817063 - B3 SINE B2 -4 212 28 2 1253 236 185 18 18 chr15 87677863 87677918 -15817056 - ID4_ SINE ID -9 74 20 2 1253 332 286 134 19 chr15 87678469 87678626 -15816348 + L1MCa LINE L1 525 699 -6052 2 1253 309 317 134 29 chr15 87678684 87678856 -15816118 - Tigger5 DNA MER2_type -2213 193 4 2 1253 582 282 71 38 chr15 87678860 87679166 -15815808 + L1MCa LINE L1 500 965 -5786 2 1253 1965 266 44 23 chr15 87679363 87679937 -15815037 - Lx8 LINE L1 -691 6782 6197 2 1253 964 124 6 6 chr15 87679940 87680119 -15814855 + (TCTA)n Simple_repeat Simple_repeat 1 179 0 2 1253 358 249 193 44 chr15 87680281 87680462 -15814512 - L1MD LINE L1 -852 5294 5087 2 1253 328 288 55 25 chr15 87680826 87681065 -15813909 - L1MD LINE L1 -1450 4696 4444 2 1253 206 270 15 31 chr15 87681207 87681272 -15813702 + GA-rich Low_complexity Low_complexity 3 66 0 2 1253 730 200 0 22 chr15 87681380 87681559 -15813415 + CT-rich Low_complexity Low_complexity 3 177 0 2 1253 1205 178 18 0 chr15 87681695 87681914 -15813060 - URR1B DNA MER1_type 0 225 3 2 1253 652 275 17 66 chr15 87681917 87682267 -15812707 - L1MC LINE L1 -2143 4003 3671 2 1253 253 332 81 0 chr15 87682478 87682588 -15812386 - MLT1A0 LTR MaLR -10 364 247 2 1253 255 203 0 0 chr15 87683290 87683349 -15811625 + (TG)n Simple_repeat Simple_repeat 1 59 0 2 1253 799 229 38 44 chr15 87683349 87683532 -15811442 - B3A SINE B2 -16 182 1 2 1253 333 0 0 0 chr15 87684607 87684644 -15810330 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1253 288 0 0 0 chr15 87684644 87684676 -15810298 + (CAT)n Simple_repeat Simple_repeat 3 34 0 2 156 2256 158 24 47 chr15 87686787 87687237 -15807737 - RMER10A LTR ERVL -2 440 1 2 1254 351 257 79 53 chr15 87688376 87688528 -15806446 + HAL1-3A_ME LINE L1 2284 2439 -419 2 1254 300 322 125 7 chr15 87688517 87688661 -15806313 + HAL1-3A_ME LINE L1 2284 2444 -414 2 1254 415 199 0 46 chr15 87688661 87688814 -15806160 + GA-rich Low_complexity Low_complexity 4 149 0 2 1254 3032 147 78 40 chr15 87690125 87690729 -15804245 + RMER20B LTR ERVK 1 627 0 2 1254 1980 178 18 3 chr15 87690744 87691087 -15803887 + RLTR11A2 LTR ERVK 180 527 0 2 1254 292 275 81 32 chr15 87691379 87691503 -15803471 + ORR1E LTR MaLR 1 130 -229 2 1254 377 272 110 57 chr15 87691741 87692076 -15802898 - RMER10A LTR ERVL -76 366 14 2 1254 1631 257 63 44 chr15 87692148 87692652 -15802322 - RMER5 LTR ERV1 -20 514 1 2 1254 1335 159 154 130 chr15 87693502 87693598 -15801376 + ORR1C1 LTR MaLR 1 128 -250 2 1254 3370 33 8 0 chr15 87693598 87693991 -15800983 + MTA_Mm LTR MaLR 1 396 0 2 1254 1335 159 154 130 chr15 87693991 87694186 -15800788 + ORR1C1 LTR MaLR 129 333 -45 2 1254 1111 89 7 0 chr15 87694186 87694332 -15800642 + B1_Mus1 SINE Alu 1 147 -1 2 1254 1335 159 154 130 chr15 87694332 87694408 -15800566 + ORR1C1 LTR MaLR 334 378 0 2 1254 3389 13 39 0 chr15 87694539 87694920 -15800054 + MTA_Mm LTR MaLR 1 396 0 2 1254 9593 24 2 3 chr15 87694920 87696019 -15798955 + MTA_Mm-int LTR MaLR 1 1098 0 2 1254 3389 13 39 0 chr15 87696019 87696400 -15798574 + MTA_Mm LTR MaLR 1 396 0 2 1254 753 51 0 0 chr15 87696597 87696695 -15798279 + (TC)n Simple_repeat Simple_repeat 1 98 0 2 1254 276 30 0 0 chr15 87696695 87696727 -15798247 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1254 771 161 0 0 chr15 87696820 87697000 -15797974 + CT-rich Low_complexity Low_complexity 1 180 0 2 1254 32 0 0 0 chr15 87698609 87698641 -15796333 + AT_rich Low_complexity Low_complexity 1 32 0 2 1254 339 25 0 0 chr15 87699110 87699150 -15795824 + (T)n Simple_repeat Simple_repeat 1 40 0 2 1254 908 318 97 40 chr15 87699977 87700350 -15794624 - MER44B DNA MER2_type -1 549 156 2 1254 219 313 0 39 chr15 87702111 87702214 -15792760 + (CATATA)n Simple_repeat Simple_repeat 4 102 0 2 1254 426 20 0 0 chr15 87702237 87702288 -15792686 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1254 182 150 0 24 chr15 87703476 87703517 -15791457 + GA-rich Low_complexity Low_complexity 4 43 0 2 1254 541 40 26 0 chr15 87703803 87703879 -15791095 + (TC)n Simple_repeat Simple_repeat 2 79 0 2 1254 347 309 189 45 chr15 87703919 87704299 -15790675 - HAL1-3A_ME LINE L1 -411 2447 2013 2 1254 322 360 6 17 chr15 87704306 87704481 -15790493 + CT-rich Low_complexity Low_complexity 4 176 0 2 1254 205 62 78 59 chr15 87704531 87704582 -15790392 + T-rich Low_complexity Low_complexity 4 55 0 2 1254 357 207 81 0 chr15 87705803 87705890 -15789084 - MLT1A LTR MaLR -53 321 228 2 1254 1185 218 140 32 chr15 87706406 87706748 -15788226 - MTEa LTR MaLR 0 379 1 2 1254 709 233 57 24 chr15 87708774 87708985 -15785989 - Lx7 LINE L1 -669 7027 6810 2 1254 408 232 27 70 chr15 87709836 87710021 -15784953 + (TCTG)n Simple_repeat Simple_repeat 2 178 0 2 1254 220 212 12 24 chr15 87710059 87710141 -15784833 + (TCTG)n Simple_repeat Simple_repeat 4 84 0 2 1254 368 299 88 28 chr15 87710785 87711232 -15783742 - L1MD LINE L1 -627 5817 5336 2 1254 599 315 91 43 chr15 87711519 87711917 -15783057 - Lx8 LINE L1 0 7473 7057 2 1254 319 366 29 75 chr15 87711960 87712199 -15782775 - L1MD LINE L1 -1153 4993 4766 2 1254 318 291 48 42 chr15 87712225 87712397 -15782577 - L1M4 LINE L1 -1424 4722 4550 2 1254 278 239 62 83 chr15 87712543 87712639 -15782335 - B1F SINE Alu 0 149 56 2 1254 979 137 11 0 chr15 87712771 87712946 -15782028 + (GAAA)n Simple_repeat Simple_repeat 1 177 0 2 1254 609 299 102 35 chr15 87713226 87713686 -15781288 + L1M3 LINE L1 2153 2643 -3497 2 1254 499 269 107 31 chr15 87713999 87714260 -15780714 + L1M3 LINE L1 2646 2926 -3214 2 1254 948 251 0 5 chr15 87714265 87714457 -15780517 + B3 SINE B2 1 191 -25 2 1254 785 246 30 98 chr15 87715532 87715752 -15779222 - MTE2a LTR MaLR -74 305 104 2 1254 1510 206 67 27 chr15 87715752 87715868 -15779106 + ORR1C2 LTR MaLR 2 171 -213 2 1254 522 0 0 0 chr15 87715868 87715926 -15779048 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 1254 1510 189 67 25 chr15 87715926 87716126 -15778848 + ORR1C2 LTR MaLR 172 383 -1 2 1254 323 229 93 19 chr15 87716126 87716231 -15778743 - MTD LTR MaLR -289 130 18 2 1254 294 297 0 0 chr15 87716373 87716437 -15778537 - B3A SINE B2 -130 68 5 2 1254 246 323 231 36 chr15 87716776 87717001 -15777973 - MLT2B2 LTR ERVL -98 417 149 2 1254 913 295 82 12 chr15 87716997 87717346 -15777628 + MLT2B1 LTR ERVL 10 475 -87 2 1254 404 342 159 17 chr15 87717579 87717930 -15777044 + ERVL-B4-int LTR ERVL 196 596 -5118 2 1254 237 232 36 12 chr15 87717943 87718026 -15776948 + (TCTG)n Simple_repeat Simple_repeat 4 88 0 2 1254 491 373 0 66 chr15 87718082 87718280 -15776694 - B4 SINE B4 -18 274 90 2 1254 1587 198 131 24 chr15 87718619 87718907 -15776067 + MTD LTR MaLR 5 337 -82 2 1254 2151 108 11 74 chr15 87718907 87719258 -15775716 + ORR1A4 LTR MaLR 1 329 0 2 1254 1587 198 131 24 chr15 87719258 87719342 -15775632 + MTD LTR MaLR 338 417 -2 2 1254 655 339 88 31 chr15 87719351 87720388 -15774586 - MERVL_2A-int LTR ERVL -3008 2753 1544 2 1254 312 401 52 16 chr15 87720405 87720712 -15774262 - L1ME3B LINE L1 -303 5937 5620 2 1254 207 229 0 0 chr15 87720722 87720783 -15774191 + C-rich Low_complexity Low_complexity 2 62 0 2 1254 460 95 21 21 chr15 87720800 87720897 -15774077 + (TCTCTG)n Simple_repeat Simple_repeat 2 98 0 2 1254 373 299 142 28 chr15 87721109 87721546 -15773428 - L1ME3B LINE L1 -756 5390 4904 2 1254 5525 92 29 10 chr15 87721705 87722498 -15772476 + RLTR13C2 LTR ERVK 1 808 0 2 1254 505 171 17 0 chr15 87722565 87722682 -15772292 + CT-rich Low_complexity Low_complexity 2 120 0 2 1254 495 0 0 0 chr15 87722679 87722734 -15772240 + (TC)n Simple_repeat Simple_repeat 1 55 0 2 1254 2466 66 0 6 chr15 87722888 87723207 -15771767 - ORR1A2 LTR MaLR -10 317 1 2 1254 196 330 54 51 chr15 87723500 87723712 -15771262 - MIR SINE MIR -35 227 19 2 1254 235 323 57 53 chr15 87724268 87724303 -15770671 - L1ME3B LINE L1 -1887 4259 4230 2 1254 1128 193 32 5 chr15 87724303 87724522 -15770452 + URR1B DNA MER1_type 1 225 0 2 1254 235 323 57 53 chr15 87724522 87724731 -15770243 - L1ME3B LINE L1 -1917 4229 4014 2 1254 23 0 0 0 chr15 87725123 87725146 -15769828 + GC_rich Low_complexity Low_complexity 1 23 0 2 1254 3422 87 35 165 chr15 87725307 87725643 -15769331 + LTRIS2 LTR ERV1 1 246 -318 2 1254 315 0 0 0 chr15 87725643 87725678 -15769296 + (GA)n Simple_repeat Simple_repeat 2 36 0 2 1254 3422 87 35 165 chr15 87725678 87725989 -15768985 + LTRIS2 LTR ERV1 247 564 0 2 1254 1019 74 0 14 chr15 87726316 87726454 -15768520 - B1_Mus1 SINE Alu 0 148 13 2 1254 1300 245 128 22 chr15 87726456 87726823 -15768151 - MTD LTR MaLR -9 410 5 2 1254 489 17 0 0 chr15 87726824 87726882 -15768092 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 1254 498 33 0 0 chr15 87728707 87728767 -15766207 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 1254 650 249 104 33 chr15 87728800 87729070 -15765904 - B4A SINE B4 -2 290 2 2 1254 189 74 0 0 chr15 87729075 87729102 -15765872 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2 1254 558 173 17 52 chr15 87729102 87729218 -15765756 - B1_Mur3 SINE Alu 0 149 38 2 1254 299 293 220 20 chr15 87729223 87729373 -15765601 - ID_B1 SINE B4 -21 203 24 2 1254 232 343 107 11 chr15 87729410 87729587 -15765387 - MLT1J2 LTR MaLR -8 440 247 2 1254 22 35 0 0 chr15 87729876 87729905 -15765069 + AT_rich Low_complexity Low_complexity 1 29 0 2 1254 309 199 86 0 chr15 87729984 87730082 -15764892 + MIRb SINE MIR 63 173 -95 3 1254 457 261 9 26 chr15 87732221 87732335 -15762639 - PB1D7 SINE Alu 0 120 9 3 1254 391 252 94 28 chr15 87732249 87732355 -15762619 - ID_B1 SINE B4 -52 172 60 3 1254 339 340 40 7 chr15 87732681 87732829 -15762145 + MER45B DNA Tip100 641 793 -247 3 1254 252 252 79 31 chr15 87735042 87735169 -15759805 - MLT1B LTR MaLR -139 251 119 3 1254 540 0 0 0 chr15 87735485 87735545 -15759429 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 3 1254 273 301 93 35 chr15 87736213 87736385 -15758589 + MLT1C LTR MaLR 1 182 -285 3 1254 732 247 48 6 chr15 87739199 87739366 -15755608 - B3A SINE B2 -15 183 10 3 1254 219 204 0 0 chr15 87740245 87740299 -15754675 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1254 468 263 72 82 chr15 87741992 87742285 -15752689 + ORR1D2 LTR MaLR 46 370 0 3 1254 1330 247 123 13 chr15 87742945 87743318 -15751656 - MTC LTR MaLR 0 421 8 3 1254 1769 215 75 40 chr15 87744235 87744705 -15750269 - RMER5 LTR ERV1 -46 488 3 3 1254 303 340 138 13 chr15 87744715 87744867 -15750107 - HAL1-3A_ME LINE L1 -394 2464 2294 3 1254 261 238 0 16 chr15 87744868 87744932 -15750042 + CT-rich Low_complexity Low_complexity 3 65 0 3 1254 251 309 12 0 chr15 87744932 87745013 -15749961 - ID4_ SINE ID 0 83 2 3 1254 2156 56 4 7 chr15 87745314 87745583 -15749391 - L1Md_F2 LINE L1 -10 6572 6305 3 1254 29 28 0 0 chr15 87745950 87745986 -15748988 + AT_rich Low_complexity Low_complexity 1 36 0 3 1254 254 194 83 69 chr15 87746025 87746052 -15748922 - ID_B1 SINE B4 -54 170 101 3 1254 256 146 0 24 chr15 87746052 87746094 -15748880 - B1F2 SINE Alu -89 60 20 3 1254 259 376 43 43 chr15 87746242 87746381 -15748593 + ID_B1 SINE B4 86 224 0 3 1254 1208 108 3 8 chr15 87746406 87746759 -15748215 + (GAA)n Simple_repeat Simple_repeat 1 350 0 3 1254 1005 336 114 18 chr15 87746874 87747950 -15747024 + L1MD LINE L1 3147 4326 -1820 3 1254 348 127 0 0 chr15 87748077 87748132 -15746842 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 1254 416 297 206 29 chr15 87748195 87748442 -15746532 - B4A SINE B4 -1 291 1 3 1254 412 263 42 0 chr15 87748448 87748543 -15746431 - PB1D10 SINE Alu -6 111 13 3 1254 521 268 91 12 chr15 87748640 87748882 -15746092 + L1MD LINE L1 4920 5180 -966 3 1254 935 330 28 11 chr15 87749155 87749437 -15745537 + B4 SINE B4 6 292 0 3 1254 951 9 0 0 chr15 87752336 87752444 -15742530 + (TTC)n Simple_repeat Simple_repeat 1 108 0 3 1254 180 0 0 0 chr15 87752570 87752590 -15742384 + (GAA)n Simple_repeat Simple_repeat 2 21 0 3 1254 944 104 15 4 chr15 87753086 87753349 -15741625 + (CA)n Simple_repeat Simple_repeat 1 266 0 3 1254 419 347 46 53 chr15 87754638 87754900 -15740074 + L1M5 LINE L1 4910 5169 -977 3 1254 654 246 16 0 chr15 87755135 87755261 -15739713 + B3A SINE B2 1 128 -70 3 1254 451 322 50 17 chr15 87755258 87755378 -15739596 - RSINE1 SINE B4 -18 147 24 3 1254 1582 209 111 14 chr15 87755392 87755761 -15739213 - MTD LTR MaLR -13 406 2 3 1254 289 149 0 29 chr15 87755779 87755848 -15739126 + T-rich Low_complexity Low_complexity 1 67 0 3 1254 2256 107 6 6 chr15 87756647 87756976 -15737998 + ORR1A4 LTR MaLR 1 329 0 3 1254 1757 253 15 24 chr15 87757881 87758290 -15736684 - MTD LTR MaLR -14 405 1 3 1254 1606 256 125 56 chr15 87758290 87759257 -15735717 - MTD-int LTR MaLR 0 1258 46 3 1254 1397 289 58 33 chr15 87759482 87759876 -15735098 - MTD LTR MaLR -13 406 3 3 1254 276 358 112 44 chr15 87760198 87760449 -15734525 - MLT1J LTR MaLR -205 307 40 3 1254 2065 149 0 21 chr15 87760647 87760983 -15733991 - ORR1A4 LTR MaLR 0 329 1 3 1254 396 0 0 0 chr15 87761481 87761525 -15733449 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1254 560 293 36 0 chr15 87761528 87761668 -15733306 - B3A SINE B2 -53 145 1 3 1254 549 194 0 0 chr15 87765032 87765212 -15729762 + GA-rich Low_complexity Low_complexity 1 180 0 3 1254 334 279 80 18 chr15 87765245 87765358 -15729616 + HAL1-3A_ME LINE L1 1978 2097 -761 3 1254 533 237 17 0 chr15 87767261 87767438 -15727536 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 3 1254 256 150 50 0 chr15 87767475 87767535 -15727439 + (CACCAT)n Simple_repeat Simple_repeat 2 64 0 3 1254 1860 224 28 5 chr15 87768152 87768543 -15726431 - MTD LTR MaLR -2 417 18 3 1254 260 233 43 43 chr15 87771334 87771428 -15723546 + MLT2B3 LTR ERVL 3 96 -458 3 1254 675 257 20 0 chr15 87771454 87771602 -15723372 - B3A SINE B2 -47 151 1 3 1254 339 25 0 0 chr15 87773095 87773135 -15721839 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1254 360 105 0 0 chr15 87773345 87773402 -15721572 - ORR1B1 LTR MaLR -305 89 33 3 1254 882 249 79 9 chr15 87773402 87773617 -15721357 - B4A SINE B4 -38 254 25 3 1254 879 241 70 0 chr15 87773743 87773942 -15721032 - B3 SINE B2 0 216 4 3 1254 298 339 106 41 chr15 87774066 87774927 -15720047 - L1MC LINE L1 -1432 4714 3798 3 1254 396 0 0 0 chr15 87774946 87774990 -15719984 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1254 1292 254 77 9 chr15 87775802 87776139 -15718835 + Lx8 LINE L1 6918 7277 -196 3 1254 474 75 0 0 chr15 87776201 87776268 -15718706 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 1254 345 47 0 0 chr15 87776259 87776302 -15718672 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 1254 307 111 0 0 chr15 87776303 87776348 -15718626 - HAL1-3A_ME LINE L1 -840 2018 1974 3 1254 607 153 3 44 chr15 87776396 87776745 -15718229 + GA-rich Low_complexity Low_complexity 1 334 0 3 1254 2593 247 28 39 chr15 87777112 87777876 -15717098 - Lx7 LINE L1 -1335 6361 5607 3 1254 2553 280 52 21 chr15 87777865 87778672 -15716302 + Lx7 LINE L1 6390 7221 -475 3 1254 312 255 31 21 chr15 87778912 87779008 -15715966 + Lx7 LINE L1 7242 7338 -358 3 1254 24 53 0 0 chr15 87779128 87779166 -15715808 + AT_rich Low_complexity Low_complexity 1 38 0 3 1254 6327 218 50 35 chr15 87779179 87779941 -15715033 - Lx6 LINE L1 -61 7635 6615 3 1254 3702 20 121 0 chr15 87779941 87780381 -15714593 - MT2_Mm LTR ERVL 0 493 1 3 1254 6327 217 48 34 chr15 87780381 87781161 -15713813 - Lx6 LINE L1 -846 6614 5810 3 1254 1630 229 118 16 chr15 87781289 87781728 -15713246 + RMER5 LTR ERV1 41 524 -10 3 1254 990 69 0 0 chr15 87783414 87783545 -15711429 + (TTTTC)n Simple_repeat Simple_repeat 2 132 0 3 1254 988 262 20 48 chr15 87783911 87784163 -15710811 - MTE2a LTR MaLR -8 371 127 3 1254 845 194 32 6 chr15 87784158 87784314 -15710660 - MTE2a LTR MaLR -218 161 2 3 1254 259 274 76 50 chr15 87785599 87785718 -15709256 - LTRIS_Mus LTR ERV1 -314 273 152 3 1254 544 331 91 16 chr15 87785732 87785984 -15708990 - RMER15 LTR ERVL -16 559 289 3 1254 810 166 0 0 chr15 87786833 87787008 -15707966 + (CA)n Simple_repeat Simple_repeat 2 176 0 3 1254 384 59 0 0 chr15 87787543 87787594 -15707380 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1254 1281 169 32 0 chr15 87788021 87788240 -15706734 - URR1A DNA MER1_type 0 226 1 3 1254 363 297 162 16 chr15 87789824 87790009 -15704965 - L1MD LINE L1 -2864 3282 3071 3 1254 1007 284 77 39 chr15 87790067 87790506 -15704468 + Lx6 LINE L1 6948 7403 -57 3 1254 241 288 14 0 chr15 87791102 87791175 -15703799 + (CA)n Simple_repeat Simple_repeat 1 74 0 3 1254 480 99 0 0 chr15 87791614 87791685 -15703289 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 3 1254 552 146 0 0 chr15 87791685 87791788 -15703186 + (TTTC)n Simple_repeat Simple_repeat 3 105 0 3 1254 1430 70 9 7 chr15 87791788 87793410 -15701564 + (TCTA)n Simple_repeat Simple_repeat 1 1625 0 3 1254 180 111 0 0 chr15 87794336 87794363 -15700611 + (CCCCCT)n Simple_repeat Simple_repeat 3 29 0 3 1254 1137 55 0 0 chr15 87794580 87794725 -15700249 + (GAA)n Simple_repeat Simple_repeat 3 147 0 3 1254 189 191 42 113 chr15 87794728 87794799 -15700175 + L3 LINE CR1 1262 1327 -3162 3 1254 330 341 108 34 chr15 87794997 87795173 -15699801 + MER58A DNA MER1_type 1 189 -35 3 1254 21 0 0 0 chr15 87795236 87795257 -15699717 + AT_rich Low_complexity Low_complexity 1 21 0 3 1254 425 19 19 0 chr15 87796410 87796464 -15698510 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 1254 242 200 0 91 chr15 87798252 87798395 -15696579 + C-rich Low_complexity Low_complexity 4 133 0 3 1254 991 0 0 16 chr15 87798403 87798524 -15696450 + (CCCTAA)n Simple_repeat Simple_repeat 1 119 0 3 1254 221 0 35 0 chr15 87798894 87798923 -15696051 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1254 269 246 122 14 chr15 87799234 87799308 -15695666 - ID4 SINE ID 0 83 2 3 1254 285 368 16 57 chr15 87799703 87799727 -15695247 + ID_B1 SINE B4 69 182 -37 3 1254 343 305 32 0 chr15 87799727 87799822 -15695152 + PB1D10 SINE Alu 11 108 -9 3 1254 249 229 16 16 chr15 87799830 87799892 -15695082 + GA-rich Low_complexity Low_complexity 3 64 0 3 1254 3040 33 0 67 chr15 87799995 87800386 -15694588 + RLTR10B2 LTR ERVK 1 365 0 3 1254 1382 238 59 31 chr15 87800946 87801394 -15693580 - MT2A LTR ERVL 0 533 1 3 1254 660 232 38 25 chr15 87801491 87801650 -15693324 + B4A SINE B4 111 271 -21 3 1254 1276 157 71 9 chr15 87801896 87802108 -15692866 - URR1B DNA MER1_type 0 225 1 3 1254 224 271 0 0 chr15 87803781 87803840 -15691134 + GA-rich Low_complexity Low_complexity 1 59 0 3 1254 288 0 0 0 chr15 87803886 87803918 -15691056 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1254 240 35 0 0 chr15 87804009 87804038 -15690936 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1254 221 119 24 0 chr15 87804334 87804376 -15690598 + (GGGTG)n Simple_repeat Simple_repeat 2 44 0 3 1254 224 248 10 0 chr15 87805689 87805790 -15689184 + (CACCAT)n Simple_repeat Simple_repeat 6 107 0 3 1254 569 266 6 36 chr15 87805792 87805887 -15689087 + HAL1-2a_MD LINE L1 2345 2439 -585 3 1254 2189 187 48 5 chr15 87805887 87806284 -15688690 - MTC LTR MaLR -3 418 5 3 1254 569 266 6 36 chr15 87806284 87806356 -15688618 + HAL1-2a_MD LINE L1 2440 2507 -517 3 1254 289 351 18 6 chr15 87806366 87806497 -15688477 + (CACCAT)n Simple_repeat Simple_repeat 6 138 0 4 1254 213 39 0 0 chr15 87806497 87806523 -15688451 + (TCC)n Simple_repeat Simple_repeat 2 27 0 4 1254 289 351 18 6 chr15 87806523 87806557 -15688417 + (CACCAT)n Simple_repeat Simple_repeat 1 34 0 4 1254 180 111 0 0 chr15 87806576 87806603 -15688371 + (CCA)n Simple_repeat Simple_repeat 3 29 0 4 1254 459 0 0 0 chr15 87813606 87813657 -15681317 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1254 294 217 145 0 chr15 87814266 87814335 -15680639 + MTEb LTR MaLR 292 370 -9 4 1254 450 0 0 0 chr15 87814335 87814385 -15680589 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1254 711 240 100 20 chr15 87814945 87814979 -15679995 - B3 SINE B2 0 216 181 4 1254 414 0 0 0 chr15 87814979 87815025 -15679949 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1254 429 20 0 0 chr15 87815025 87815074 -15679900 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1254 711 240 100 20 chr15 87815074 87815238 -15679736 - B3 SINE B2 -36 180 2 4 1254 2265 122 91 3 chr15 87815425 87815787 -15679187 - ORR1B1 LTR MaLR 0 394 1 4 1254 445 30 60 15 chr15 87816339 87816406 -15678568 - B1_Mus2 SINE Alu -1 146 77 4 1255 374 222 9 61 chr15 87819488 87819603 -15675371 + ORR1D2 LTR MaLR 1 109 -261 4 1255 392 111 13 65 chr15 87820416 87820493 -15674481 + RMER4A LTR ERVK 394 466 0 4 1255 324 326 67 56 chr15 87821631 87821972 -15673002 + Lx8 LINE L1 7121 7465 -8 4 1255 287 209 0 3 chr15 87822252 87822317 -15672657 + MTEa LTR MaLR 3 66 -313 4 1255 1929 182 38 39 chr15 87822567 87823047 -15671927 - BGLII_B LTR ERVK -5 436 14 4 1255 288 375 0 12 chr15 87824378 87824548 -15670426 + (CA)n Simple_repeat Simple_repeat 1 168 0 4 1255 1285 140 13 71 chr15 87824813 87825052 -15669922 + URR1B DNA MER1_type 1 225 0 4 1255 21 0 0 0 chr15 87827305 87827326 -15667648 + AT_rich Low_complexity Low_complexity 1 21 0 4 1255 501 331 92 4 chr15 87827684 87827933 -15667041 - MLT1A0 LTR MaLR -21 344 74 4 1255 1986 109 131 18 chr15 87829128 87829464 -15665510 - ORR1C2 LTR MaLR -7 377 4 4 1255 1440 259 39 22 chr15 87829569 87829973 -15665001 - MTD LTR MaLR 0 419 9 4 1255 1602 241 164 101 chr15 87829973 87830117 -15664857 - MTD-int LTR MaLR -3 1577 1362 4 1255 1095 65 0 0 chr15 87830117 87830256 -15664718 + B1_Mus1 SINE Alu 10 148 0 4 1255 1602 241 164 101 chr15 87830256 87831114 -15663860 - MTD-int LTR MaLR -3 1361 68 4 1255 235 329 0 38 chr15 87831110 87831189 -15663785 - MTD LTR MaLR -331 88 13 4 1255 182 270 39 39 chr15 87833059 87833136 -15661838 - L2b LINE L2 -270 3105 3029 4 1255 201 156 0 0 chr15 87835568 87835600 -15659374 + (CAA)n Simple_repeat Simple_repeat 1 32 0 4 1255 423 0 0 0 chr15 87836307 87836354 -15658620 + (TTA)n Simple_repeat Simple_repeat 2 48 0 4 1255 568 311 18 12 chr15 87836482 87836645 -15658329 - B4A SINE B4 -125 167 4 4 1255 232 274 27 14 chr15 87836725 87836799 -15658175 - MTEa LTR MaLR -18 361 287 4 1255 848 188 7 14 chr15 87836955 87837101 -15657873 - B1_Mur4 SINE Alu 0 150 6 4 1255 230 0 33 0 chr15 87837547 87837577 -15657397 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1255 477 0 0 0 chr15 87837625 87837678 -15657296 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1255 8574 40 3 0 chr15 87837765 87838790 -15656184 - L1Md_F3 LINE L1 0 6584 5586 4 1255 8080 55 1 8 chr15 87838789 87839805 -15655169 + L1Md_F3 LINE L1 4535 5543 -340 4 1255 423 0 0 0 chr15 87841225 87841272 -15653702 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1255 433 351 69 25 chr15 87841475 87841720 -15653254 - L1Md_F3 LINE L1 -940 5206 4951 4 1255 229 268 77 23 chr15 87841853 87841983 -15652991 + MTC-int LTR MaLR 1093 1229 -29 4 1255 540 305 71 31 chr15 87842077 87842350 -15652624 + MTE2a LTR MaLR 59 379 0 4 1255 254 330 10 29 chr15 87843897 87844000 -15650974 - B4A SINE B4 -2 290 190 4 1255 1791 200 190 19 chr15 87845164 87845637 -15649337 - RMER15 LTR ERVL 0 575 22 4 1255 237 296 0 53 chr15 87845677 87845752 -15649222 - RMER15 LTR ERVL -503 72 2 4 1255 3456 42 0 10 chr15 87846753 87847164 -15647810 + MTB_Mm LTR MaLR 1 407 0 4 1255 1268 138 75 19 chr15 87847219 87847433 -15647541 - URR1A DNA MER1_type 0 226 1 4 1255 701 202 32 4 chr15 87848445 87848618 -15646356 + B3 SINE B2 4 190 -3 4 1255 21 0 0 0 chr15 87849177 87849198 -15645776 + AT_rich Low_complexity Low_complexity 1 21 0 4 1255 1519 202 77 47 chr15 87849848 87850024 -15644950 + ORR1D1 LTR MaLR 1 166 -208 4 1255 332 0 47 0 chr15 87850024 87850067 -15644907 + (TCCC)n Simple_repeat Simple_repeat 1 45 0 4 1255 1519 202 77 47 chr15 87850067 87850253 -15644721 + ORR1D1 LTR MaLR 167 374 0 4 1255 1602 177 54 95 chr15 87850262 87850631 -15644343 - ORR1B1 LTR MaLR 0 394 41 4 1255 352 284 108 21 chr15 87851330 87851510 -15643464 - B3 SINE B2 -3 195 2 4 1255 1368 19 0 0 chr15 87851535 87851694 -15643280 + (TCTCCC)n Simple_repeat Simple_repeat 6 164 0 4 1255 182 194 15 0 chr15 87851739 87851806 -15643168 + (TG)n Simple_repeat Simple_repeat 2 69 0 4 1255 915 101 0 0 chr15 87851825 87851984 -15642990 + (TC)n Simple_repeat Simple_repeat 2 160 0 4 1255 279 0 0 0 chr15 87851984 87852014 -15642960 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1255 1732 214 52 22 chr15 87852498 87852905 -15642069 + MTD LTR MaLR 1 419 0 4 1255 234 242 63 121 chr15 87852945 87853119 -15641855 - L1MB3 LINE L1 -103 6080 5917 4 1255 204 227 0 0 chr15 87853344 87853388 -15641586 + (TTG)n Simple_repeat Simple_repeat 2 45 0 4 1255 232 279 75 37 chr15 87853466 87853600 -15641374 - L1M4 LINE L1 -605 5569 5431 4 1255 27 0 0 0 chr15 87853660 87853687 -15641287 + AT_rich Low_complexity Low_complexity 1 27 0 4 1255 387 340 26 26 chr15 87853739 87853890 -15641084 - MER63D DNA AcHobo -906 155 5 4 1255 199 375 0 0 chr15 87853890 87853986 -15640988 + MIRc SINE MIR 173 268 0 4 1255 222 118 0 0 chr15 87854510 87854544 -15640430 + (TCCC)n Simple_repeat Simple_repeat 2 35 0 4 1255 314 301 141 15 chr15 87854565 87854700 -15640274 - HAL1-3A_ME LINE L1 -423 2435 2284 4 1255 213 94 0 0 chr15 87854823 87854855 -15640119 + (CCA)n Simple_repeat Simple_repeat 1 32 0 4 1255 897 294 96 45 chr15 87855204 87855539 -15639435 + ORR1E LTR MaLR 8 359 0 4 1255 1835 290 119 145 chr15 87855545 87856046 -15638928 + ORR1E-int LTR MaLR 6 564 -1016 4 1255 279 0 0 0 chr15 87856046 87856077 -15638897 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1255 1835 290 119 145 chr15 87856077 87857024 -15637950 + ORR1E-int LTR MaLR 565 1417 -163 4 1255 843 51 0 0 chr15 87857027 87857145 -15637829 - L1Md_F2 LINE L1 -1 6581 6464 4 1255 210 246 17 17 chr15 87857151 87857209 -15637765 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 4 1255 820 236 208 66 chr15 87857488 87857820 -15637154 + MTE2a LTR MaLR 1 379 0 4 1255 1681 238 52 45 chr15 87859549 87859950 -15635024 - MTD LTR MaLR -15 404 1 4 1255 382 252 14 121 chr15 87860027 87860167 -15634807 + ORR1A4 LTR MaLR 1 125 -204 4 1255 717 214 112 24 chr15 87861251 87861457 -15633517 + ID_B1 SINE B4 1 224 0 4 1255 423 0 0 0 chr15 87861989 87862036 -15632938 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1255 282 87 0 0 chr15 87862177 87862223 -15632751 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1255 428 0 0 19 chr15 87863508 87863561 -15631413 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1255 350 253 25 0 chr15 87863654 87863733 -15631241 - MTEb LTR MaLR -7 372 292 4 1255 687 192 0 13 chr15 87863816 87864036 -15630938 + CT-rich Low_complexity Low_complexity 1 217 0 4 1255 707 253 17 17 chr15 87864042 87864215 -15630759 - MTEb LTR MaLR -203 176 4 4 1255 188 156 0 59 chr15 87866450 87866484 -15628490 + MIR SINE MIR 120 151 -57 4 1255 540 238 170 26 chr15 87866499 87866693 -15628281 - ID_B1 SINE B4 -1 223 2 4 1255 25 51 0 0 chr15 87867517 87867556 -15627418 + AT_rich Low_complexity Low_complexity 1 39 0 4 1255 900 230 11 5 chr15 87867579 87867767 -15627207 - B3A SINE B2 -8 190 2 4 1255 5039 156 28 28 chr15 87871180 87872087 -15622887 - RMER13B LTR ERVK 0 908 2 4 1255 237 358 31 10 chr15 87872970 87873066 -15621908 + ORR1E LTR MaLR 1 98 -281 4 1255 243 200 40 0 chr15 87873129 87873179 -15621795 + ORR1E LTR MaLR 87 138 -221 4 1255 195 42 0 0 chr15 87874400 87874424 -15620550 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1255 389 283 57 38 chr15 87874609 87874767 -15620207 - L1MA4 LINE L1 -446 5854 5694 4 1255 1120 90 0 0 chr15 87875004 87875149 -15619825 + B1_Mus2 SINE Alu 3 147 0 4 1255 361 313 57 57 chr15 87875442 87875601 -15619373 + RMER15 LTR ERVL 1 159 -416 4 1255 741 301 83 15 chr15 87875613 87875879 -15619095 + RMER15 LTR ERVL 289 572 -3 4 1255 1692 321 81 32 chr15 87876214 87877665 -15617309 + L1MA4A LINE L1 2340 3863 -2516 4 1255 864 306 110 8 chr15 87877668 87878140 -15616834 + L1MA4A LINE L1 4474 4993 -1386 4 1255 682 147 17 33 chr15 87878145 87878265 -15616709 + B1_Mur1 SINE Alu 32 149 0 4 1255 23 0 0 0 chr15 87878344 87878367 -15616607 + AT_rich Low_complexity Low_complexity 1 23 0 4 1255 23 0 0 0 chr15 87878405 87878428 -15616546 + AT_rich Low_complexity Low_complexity 1 23 0 4 1255 28 0 0 0 chr15 87878759 87878787 -15616187 + AT_rich Low_complexity Low_complexity 1 28 0 4 1255 6204 160 11 116 chr15 87878788 87879167 -15615807 + Lx5 LINE L1 4641 4901 -976 4 1255 1256 120 20 20 chr15 87879167 87879362 -15615612 + B2_Mm2 SINE B2 1 195 0 4 1255 6959 175 43 62 chr15 87879362 87881445 -15613529 + Lx5 LINE L1 4902 7046 -4 4 1255 413 320 109 8 chr15 87881769 87882153 -15612821 + L1MA4A LINE L1 5152 5574 -805 4 1255 599 75 37 0 chr15 87882179 87882286 -15612688 + (CA)n Simple_repeat Simple_repeat 1 111 0 4 1255 354 324 21 43 chr15 87882369 87882567 -15612407 + L1MA4A LINE L1 5765 5995 -541 4 1255 1012 280 103 24 chr15 87882623 87883081 -15611893 + Lx9 LINE L1 7077 7570 -74 4 1255 24 32 0 0 chr15 87883142 87883173 -15611801 + AT_rich Low_complexity Low_complexity 1 31 0 4 1255 344 269 0 80 chr15 87883173 87883195 -15611779 + L1MA4A LINE L1 6051 6067 -472 4 1255 2459 138 55 8 chr15 87883195 87883597 -15611377 + MTC LTR MaLR 1 421 0 4 1255 344 269 0 80 chr15 87883597 87883687 -15611287 + L1MA4A LINE L1 6068 6154 -385 4 1255 253 271 14 14 chr15 87883933 87884004 -15610970 + MTE2a LTR MaLR 285 355 -24 4 1255 393 318 11 28 chr15 87884789 87884967 -15610007 + GA-rich Low_complexity Low_complexity 5 179 0 4 1255 318 182 0 0 chr15 87885700 87885766 -15609208 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 1255 3046 47 2 65 chr15 87885821 87886235 -15608739 + RLTR10 LTR ERVK 1 388 -2 4 1255 972 160 0 0 chr15 87887930 87888155 -15606819 + (TGAA)n Simple_repeat Simple_repeat 1 225 0 5 1255 878 80 53 0 chr15 87890757 87890907 -15604067 + (TCTCTG)n Simple_repeat Simple_repeat 6 163 0 5 1255 408 20 0 0 chr15 87890908 87890957 -15604017 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1255 539 333 16 75 chr15 87890964 87891272 -15603702 - B4 SINE B4 -2 290 1 5 1255 447 19 0 0 chr15 87891733 87891785 -15603189 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1255 498 272 17 81 chr15 87891989 87892161 -15602813 + HAL1-2a_MD LINE L1 2345 2505 -519 5 1255 901 147 12 0 chr15 87892190 87892360 -15602614 + CT-rich Low_complexity Low_complexity 3 174 0 5 1255 225 94 0 0 chr15 87892360 87892392 -15602582 + (CACCAT)n Simple_repeat Simple_repeat 4 35 0 5 1255 1550 255 42 17 chr15 87893912 87894319 -15600655 - MTD LTR MaLR 0 419 3 5 1255 254 303 11 22 chr15 87894479 87894570 -15600404 + MER74B LTR ERVL 76 165 -457 5 1255 234 0 0 0 chr15 87894906 87894932 -15600042 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 5 1255 302 248 137 52 chr15 87895423 87895576 -15599398 - L1MEg LINE L1 -4140 1944 1779 5 1255 376 256 77 0 chr15 87895667 87895825 -15599149 + RMER12 LTR ERVK 770 856 -466 5 1255 702 300 118 11 chr15 87895827 87896191 -15598783 - Lx9 LINE L1 -174 7470 7068 5 1255 372 213 82 31 chr15 87897132 87897229 -15597745 + B3A SINE B2 13 114 -102 5 1255 351 0 0 0 chr15 87897243 87897282 -15597692 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1255 459 0 0 0 chr15 87897282 87897332 -15597642 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 1255 475 112 22 0 chr15 87897648 87897737 -15597237 + (TA)n Simple_repeat Simple_repeat 1 91 0 5 1255 240 270 143 0 chr15 87897847 87897973 -15597001 - L1MD1 LINE L1 0 6242 6099 5 1255 500 189 0 53 chr15 87898072 87898262 -15596712 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 1255 1203 43 7 0 chr15 87900173 87900313 -15594661 + B1_Mus1 SINE Alu 1 141 -7 5 1255 398 20 0 19 chr15 87900315 87900367 -15594607 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 5 1255 1789 187 94 17 chr15 87901641 87902043 -15592931 + Lx5 LINE L1 6616 7048 -2 5 1255 221 178 22 0 chr15 87902327 87902372 -15592602 + B4 SINE B4 2 47 -245 5 1255 284 269 11 11 chr15 87902381 87902475 -15592499 + GA-rich Low_complexity Low_complexity 2 95 0 5 1255 208 0 0 143 chr15 87904715 87904764 -15590210 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 5 1255 204 179 0 0 chr15 87906968 87907007 -15587967 + GA-rich Low_complexity Low_complexity 1 39 0 5 1255 558 258 35 90 chr15 87907016 87907216 -15587758 - B4 SINE B4 -90 202 14 5 1255 752 300 93 3 chr15 87907254 87907545 -15587429 + Lx8 LINE L1 7155 7471 -2 5 1255 337 340 60 26 chr15 87909565 87909716 -15585258 + HAL1-3A_ME LINE L1 2284 2439 -419 5 1255 1228 249 7 62 chr15 87909982 87910290 -15584684 + B4 SINE B4 2 292 0 5 1255 183 204 0 0 chr15 87915588 87915632 -15579342 + GA-rich Low_complexity Low_complexity 1 44 0 5 1255 590 267 89 0 chr15 87917663 87917809 -15577165 - B3 SINE B2 -57 159 1 5 1255 233 291 189 0 chr15 87917824 87917951 -15577023 - L1MC1 LINE L1 -12 6321 6171 5 1255 1892 260 77 16 chr15 87918169 87918790 -15576184 - L1MC1 LINE L1 -343 5990 5332 5 1255 279 0 0 0 chr15 87919451 87919482 -15575492 + (GA)n Simple_repeat Simple_repeat 1 31 0 5 1255 438 176 0 0 chr15 87920251 87920336 -15574638 + GA-rich Low_complexity Low_complexity 2 86 0 5 1255 209 337 0 37 chr15 87921124 87921232 -15573742 + CT-rich Low_complexity Low_complexity 1 104 0 5 1255 799 256 18 6 chr15 87921998 87922163 -15572811 - B3 SINE B2 -48 168 2 5 1255 438 392 15 26 chr15 87922280 87922552 -15572422 - L1MD LINE L1 -807 5339 5071 5 1255 338 333 33 16 chr15 87922560 87922682 -15572292 + MTD LTR MaLR 1 124 -295 5 1255 770 291 130 24 chr15 87922834 87923056 -15571918 + MTD LTR MaLR 97 345 -74 5 1255 255 79 0 0 chr15 87923056 87923094 -15571880 + (CTAAA)n Simple_repeat Simple_repeat 3 40 0 5 1255 770 291 130 24 chr15 87923094 87923163 -15571811 + MTD LTR MaLR 346 418 -1 5 1255 342 371 47 30 chr15 87923301 87923537 -15571437 - L1MD LINE L1 -1109 5037 4798 5 1255 718 302 65 19 chr15 87923597 87924009 -15570965 - L1MD LINE L1 -1422 4724 4288 5 1255 469 265 168 7 chr15 87924118 87924255 -15570719 - RSINE1 SINE B4 -1 164 6 5 1255 558 343 117 68 chr15 87924284 87925029 -15569945 - L1MD LINE L1 -3128 3018 2238 5 1255 304 291 48 19 chr15 87925101 87925206 -15569768 - MTEa LTR MaLR 0 379 272 5 1255 3819 44 2 4 chr15 87925699 87926159 -15568815 - L1Md_F2 LINE L1 -1 6581 6123 5 1255 409 143 71 0 chr15 87926166 87926236 -15568738 - B3 SINE B2 -6 210 136 5 1255 625 183 89 30 chr15 87926238 87926373 -15568601 + MTC LTR MaLR 1 143 -278 5 1255 1382 181 44 29 chr15 87926457 87926730 -15568244 + MTC LTR MaLR 145 421 0 5 1255 559 276 7 22 chr15 87926730 87926866 -15568108 - B3 SINE B2 -78 138 5 5 1255 339 311 235 105 chr15 87927198 87927501 -15567473 - ORR1E LTR MaLR -38 341 3 5 1255 268 317 12 0 chr15 87928009 87928091 -15566883 - ID4_ SINE ID 0 83 1 5 1255 301 374 99 23 chr15 87928190 87928543 -15566431 - L1M5 LINE L1 -2083 4063 3684 5 1255 315 0 0 0 chr15 87929858 87929893 -15565081 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1255 310 252 202 8 chr15 87930156 87930280 -15564694 - ORR1E LTR MaLR 0 379 232 5 1255 615 168 0 0 chr15 87930280 87930399 -15564575 + CT-rich Low_complexity Low_complexity 1 119 0 5 1255 465 19 0 0 chr15 87930408 87930462 -15564512 + (GA)n Simple_repeat Simple_repeat 2 55 0 5 1255 646 224 75 43 chr15 87930462 87930552 -15564422 - ORR1E LTR MaLR -166 193 98 5 1255 2703 26 0 0 chr15 87930552 87930862 -15564112 + L1Md_F2 LINE L1 6273 6582 0 5 1255 646 224 75 43 chr15 87930862 87930958 -15564016 - ORR1E LTR MaLR -262 97 1 5 1255 348 179 18 167 chr15 87931367 87931481 -15563493 + B3A SINE B2 1 97 -101 5 1255 222 91 0 0 chr15 87931536 87931569 -15563405 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1255 1088 124 6 0 chr15 87931569 87931746 -15563228 + (GA)n Simple_repeat Simple_repeat 2 180 0 5 1255 25 65 0 0 chr15 87931753 87931799 -15563175 + AT_rich Low_complexity Low_complexity 1 46 0 5 1255 689 320 41 38 chr15 87932214 87932558 -15562416 - Lx8 LINE L1 -72 7401 7057 5 1255 841 236 12 8 chr15 87932565 87932769 -15562205 + Lx8 LINE L1 6796 7010 -463 5 1255 2592 248 124 30 chr15 87933456 87934283 -15560691 + Lx8 LINE L1 6230 7134 -339 5 1255 479 60 15 0 chr15 87934331 87934398 -15560576 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 5 1255 248 226 129 0 chr15 87934403 87934496 -15560478 + Lx8 LINE L1 7367 7471 -2 5 1255 302 271 7 0 chr15 87935633 87935773 -15559201 + (TGAA)n Simple_repeat Simple_repeat 2 142 0 5 1255 422 308 20 0 chr15 87935781 87935927 -15559047 + (TGAG)n Simple_repeat Simple_repeat 3 151 0 5 1255 247 336 67 0 chr15 87937896 87938015 -15556959 + MTE-int LTR MaLR 8 134 -1446 5 1255 423 266 12 38 chr15 87938017 87938177 -15556797 - L1M4 LINE L1 -2389 3757 3602 5 1255 467 258 81 21 chr15 87938206 87938392 -15556582 + Lx8 LINE L1 7275 7471 -2 5 1255 633 76 0 0 chr15 87938505 87938597 -15556377 + (CA)n Simple_repeat Simple_repeat 2 93 0 5 1255 496 270 24 8 chr15 87938951 87939078 -15555896 + RSINE1 SINE B4 4 132 -33 5 1255 1054 258 138 12 chr15 87939188 87939525 -15555449 - MTD LTR MaLR 0 419 20 5 1255 462 289 138 10 chr15 87939661 87939857 -15555117 - MER2 DNA MER2_type -78 267 47 5 1255 468 0 0 0 chr15 87939898 87939950 -15555024 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1255 606 287 37 28 chr15 87940607 87940900 -15554074 + L1M5 LINE L1 3772 4067 -2079 5 1255 230 349 90 15 chr15 87940975 87941109 -15553865 + MLT2C1 LTR ERVL 154 297 -100 5 1255 871 133 30 9 chr15 87941317 87941890 -15553084 + (TCTA)n Simple_repeat Simple_repeat 1 585 0 5 1255 377 246 45 28 chr15 87941970 87942146 -15552828 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 5 1255 2662 123 22 20 chr15 87943536 87943942 -15551032 - MTB_Mm LTR MaLR 0 407 1 5 1255 589 200 14 63 chr15 87944376 87944522 -15550452 - MTD LTR MaLR 0 421 283 5 1255 894 261 19 5 chr15 87944577 87944785 -15550189 + B3 SINE B2 1 211 -5 5 1255 408 20 0 0 chr15 87946331 87946380 -15548594 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1256 207 0 0 0 chr15 87953933 87953956 -15541018 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1256 202 127 27 40 chr15 87955553 87955627 -15539347 + (TA)n Simple_repeat Simple_repeat 1 73 0 5 1256 1202 161 247 127 chr15 87955664 87955814 -15539160 - MT2A LTR ERVL -93 440 203 5 1256 315 0 0 0 chr15 87955814 87955849 -15539125 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 1256 1202 161 247 127 chr15 87955849 87956083 -15538891 - MT2A LTR ERVL -331 202 10 5 1256 720 265 35 10 chr15 87956439 87956641 -15538333 - RMER5 LTR ERV1 0 534 328 5 1256 956 241 312 10 chr15 87956788 87957072 -15537902 - ORR1D2 LTR MaLR 0 370 1 5 1256 1949 211 76 18 chr15 87957072 87957521 -15537453 - ORR1D2-int LTR MaLR 0 1370 896 5 1256 269 210 80 31 chr15 87957605 87957767 -15537207 + (TAGA)n Simple_repeat Simple_repeat 3 172 0 5 1256 320 325 80 42 chr15 87957794 87958006 -15536968 + L1M4b LINE L1 1730 1949 -5385 5 1256 185 253 85 37 chr15 87958930 87959012 -15535962 - L2b LINE L2 -2 3373 3288 5 1256 331 291 39 185 chr15 87959389 87959805 -15535169 + ORR1E LTR MaLR 9 354 -5 5 1256 379 326 0 43 chr15 87960294 87960432 -15534542 - Tigger15a DNA TcMar 0 715 584 5 1256 2115 190 39 17 chr15 87960658 87961070 -15533904 - MTC LTR MaLR 0 421 1 5 1256 428 83 0 0 chr15 87961220 87961280 -15533694 - MTEb LTR MaLR 0 379 320 5 1256 829 281 155 71 chr15 87961280 87961602 -15533372 - MT2A LTR ERVL 0 554 206 5 1256 1281 254 39 10 chr15 87963127 87963433 -15531541 + MTEa LTR MaLR 61 375 -4 5 1256 385 284 147 13 chr15 87963585 87963817 -15531157 - L1ME3A LINE L1 -65 6108 5846 5 1256 2400 150 37 0 chr15 87963975 87964355 -15530619 + ORR1B1 LTR MaLR 1 394 0 5 1256 264 86 0 0 chr15 87964746 87964781 -15530193 - URR1B DNA MER1_type 0 225 191 5 1256 243 0 0 0 chr15 87964782 87964809 -15530165 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 5 1256 674 200 30 0 chr15 87964815 87965017 -15529957 - Lx4B LINE L1 -17 7041 6740 6 1256 740 176 99 28 chr15 87965000 87965181 -15529793 + Lx2B LINE L1 6530 6723 -277 6 1256 751 134 44 7 chr15 87965181 87965316 -15529658 - URR1B DNA MER1_type -28 197 58 5 1256 318 333 68 27 chr15 87965444 87965592 -15529382 - L1ME3A LINE L1 -1209 4937 4784 5 1256 348 298 78 23 chr15 87965764 87966073 -15528901 - L1ME3A LINE L1 -1645 4501 4176 5 1256 343 274 133 67 chr15 87966143 87966304 -15528670 - L1ME3A LINE L1 -2075 4071 3904 5 1256 342 0 0 0 chr15 87966304 87966342 -15528632 + (GA)n Simple_repeat Simple_repeat 2 39 0 6 1256 343 274 133 67 chr15 87966342 87966450 -15528524 - L1ME3A LINE L1 -2243 3903 3784 5 1256 357 345 10 54 chr15 87966464 87966761 -15528213 - L1ME3 LINE L1 -4 6158 5875 6 1256 331 322 121 82 chr15 87966869 87967308 -15527666 - L1MD3 LINE L1 -23 7972 7517 6 1256 1019 119 170 16 chr15 87969120 87969308 -15525666 - URR1B DNA MER1_type -8 217 1 6 1256 272 308 104 8 chr15 87970005 87970139 -15524835 + L2 LINE L2 1916 2062 -1357 6 1256 392 206 0 40 chr15 87970288 87970364 -15524610 + ID4 SINE ID 11 83 0 6 1256 647 275 73 55 chr15 87970379 87970692 -15524282 + MTEa LTR MaLR 7 379 0 6 1256 264 292 34 0 chr15 87970745 87970834 -15524140 - MLT2D LTR ERVL -60 500 409 6 1256 2496 183 52 27 chr15 87970844 87970895 -15524079 - RLTR20B3 LTR ERVK -43 534 483 6 1256 387 0 0 0 chr15 87970895 87970938 -15524036 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1256 2496 183 52 27 chr15 87970938 87971407 -15523567 - RLTR20B3 LTR ERVK -95 482 3 6 1256 339 263 32 0 chr15 87971438 87971533 -15523441 + MLT2D LTR ERVL 133 230 -184 6 1256 240 86 0 0 chr15 87971868 87971903 -15523071 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1256 378 0 0 0 chr15 87973848 87973890 -15521084 + (TC)n Simple_repeat Simple_repeat 1 42 0 6 1256 405 0 0 0 chr15 87973890 87973934 -15521040 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1256 203 267 9 62 chr15 87975180 87975292 -15519682 + CT-rich Low_complexity Low_complexity 6 111 0 6 1256 282 301 32 16 chr15 87975579 87975704 -15519270 + (CA)n Simple_repeat Simple_repeat 1 127 0 6 1256 670 189 0 19 chr15 87975859 87976021 -15518953 + GA-rich Low_complexity Low_complexity 3 161 0 6 1256 986 285 103 24 chr15 87979113 87979454 -15515520 - MTEa LTR MaLR -9 370 3 6 1256 327 192 0 0 chr15 87979539 87979612 -15515362 + CT-rich Low_complexity Low_complexity 2 74 0 6 1256 341 287 145 14 chr15 87979632 87979770 -15515204 - HAL1-3A_ME LINE L1 -419 2439 2284 6 1256 356 333 0 0 chr15 87979787 87979880 -15515094 - B1_Mur2 SINE Alu -23 126 34 6 1256 621 230 7 7 chr15 87979920 87980073 -15514901 + L1M2 LINE L1 4742 4894 -1249 6 1256 759 278 168 8 chr15 87980188 87980438 -15514536 - MTD LTR MaLR -1 418 129 6 1256 3251 48 7 15 chr15 87981189 87981592 -15513382 + MTB LTR MaLR 1 400 0 6 1256 1167 276 113 19 chr15 87983279 87983649 -15511325 - MTD LTR MaLR -14 405 1 6 1256 1179 82 0 0 chr15 87983777 87983923 -15511051 + B1_Mm SINE Alu 2 147 0 6 1256 270 0 0 0 chr15 87983927 87983957 -15511017 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 6 1256 471 60 0 0 chr15 87984075 87984142 -15510832 + (TTTAG)n Simple_repeat Simple_repeat 3 69 0 6 1256 269 280 4 27 chr15 87988693 87988780 -15506194 + MLT1B LTR MaLR 1 84 -383 6 1256 2155 176 101 16 chr15 87988865 87989349 -15505625 + RLTR11A2 LTR ERVK 1 525 -2 6 1256 1654 237 42 6 chr15 87989437 87989797 -15505177 + MTE2b LTR MaLR 3 375 -4 6 1256 1935 99 81 10 chr15 87991872 87992169 -15502805 + ORR1A3 LTR MaLR 1 318 -8 6 1256 597 287 158 12 chr15 87992186 87992426 -15502548 - MLT1B LTR MaLR -82 308 34 6 1256 401 339 23 0 chr15 87992720 87992894 -15502080 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 6 1256 661 114 9 9 chr15 87992907 87993022 -15501952 + (TCTA)n Simple_repeat Simple_repeat 4 118 0 6 1256 455 0 18 0 chr15 87993035 87993090 -15501884 + (CATA)n Simple_repeat Simple_repeat 2 57 0 6 1256 212 361 14 0 chr15 87993290 87993362 -15501612 + MIR SINE MIR 21 93 -169 6 1256 1039 282 57 93 chr15 87994572 87994959 -15500015 + MTE2a LTR MaLR 1 373 -6 6 1256 721 279 130 33 chr15 87995489 87995790 -15499184 - MTD LTR MaLR -36 383 26 6 1256 1915 221 37 59 chr15 87995883 87996423 -15498551 + RLTR11A LTR ERVK 1 528 0 6 1256 258 310 44 44 chr15 87996480 87996615 -15498359 - YREP_Mm Unknown Unknown -1456 356 222 6 1256 853 169 0 34 chr15 87996523 87996670 -15498304 + B1_Mus1 SINE Alu 7 148 0 6 1256 405 306 24 43 chr15 87996760 87996924 -15498050 + MER20 DNA MER1_type 9 169 -50 6 1256 182 238 116 70 chr15 87997964 87998050 -15496924 + L2 LINE L2 2407 2496 -923 6 1256 750 301 101 39 chr15 87998162 87998313 -15496661 + L1M4b LINE L1 12 166 -7168 6 1256 2954 146 29 81 chr15 87998313 87998930 -15496044 - RMER4B LTR ERVK 0 585 1 6 1256 750 301 101 39 chr15 87998930 87999244 -15495730 + L1M4b LINE L1 167 506 -6828 6 1256 274 333 166 5 chr15 87999387 87999604 -15495370 + L1M4b LINE L1 780 1031 -6303 6 1256 1116 267 10 145 chr15 87999610 87999996 -15494978 + MTEa LTR MaLR 1 334 -45 6 1256 364 291 114 39 chr15 88000015 88000269 -15494705 + L1M4c LINE L1 1039 1311 -6023 1 1256 1330 221 63 3 chr15 88000295 88000595 -15494379 - MTD LTR MaLR -15 404 87 2 1256 456 363 140 48 chr15 88000596 88001033 -15493941 + L1M4c LINE L1 1752 2340 -4762 1 1256 332 301 75 146 chr15 88001083 88001309 -15493665 + B3 SINE B2 1 210 -6 3 1256 374 284 91 32 chr15 88001363 88001695 -15493279 + L1M4c LINE L1 2830 3187 -3819 1 1256 3290 53 2 0 chr15 88001706 88002104 -15492870 - L1_Mus1 LINE L1 -9 6558 6160 4 1256 1107 228 70 16 chr15 88002363 88002733 -15492241 + L1M4c LINE L1 3356 3745 -3261 1 1256 365 247 16 21 chr15 88002715 88002875 -15492099 + L1M4c LINE L1 4564 4721 -2285 1 1256 1386 292 7 50 chr15 88003053 88003615 -15491359 + L1M4c LINE L1 4772 5309 -1697 1 1256 889 262 35 0 chr15 88003714 88003916 -15491058 + B3 SINE B2 1 209 -7 5 1256 515 256 77 82 chr15 88004366 88004536 -15490438 - B3A SINE B2 -4 194 26 6 1256 24 0 0 0 chr15 88005369 88005393 -15489581 + AT_rich Low_complexity Low_complexity 1 24 0 7 1256 456 19 0 0 chr15 88005532 88005585 -15489389 + (CA)n Simple_repeat Simple_repeat 1 53 0 8 1256 217 308 12 37 chr15 88007294 88007456 -15487518 + GA-rich Low_complexity Low_complexity 2 159 0 9 1256 269 281 33 33 chr15 88009833 88009925 -15485049 - MTEa LTR MaLR -13 366 275 1 1256 293 225 42 14 chr15 88010406 88010478 -15484496 + Tigger5 DNA MER2_type 51 124 -2282 1 1256 362 309 107 0 chr15 88010684 88010852 -15484122 - MER99 DNA hAT? -1 830 645 1 1256 301 226 129 12 chr15 88011033 88011118 -15483856 + ORR1E LTR MaLR 9 103 -256 1 1256 464 304 110 10 chr15 88011413 88011622 -15483352 - MER99 DNA hAT? -421 410 181 1 1256 298 298 70 0 chr15 88012534 88012648 -15482326 - MLT1B LTR MaLR -16 374 253 1 1256 2318 129 86 0 chr15 88014029 88014082 -15480892 + RMER6B LTR ERVK 1 53 -408 1 1256 198 0 0 0 chr15 88014082 88014104 -15480870 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 1 1256 2318 129 86 0 chr15 88014104 88014422 -15480552 + RMER6B LTR ERVK 54 402 -59 1 1256 623 57 11 0 chr15 88014459 88014547 -15480427 + (GA)n Simple_repeat Simple_repeat 1 89 0 1 1256 450 0 0 0 chr15 88014547 88014596 -15480378 + (GGAA)n Simple_repeat Simple_repeat 1 50 0 1 1256 405 102 0 0 chr15 88014607 88014666 -15480308 + (GGGGA)n Simple_repeat Simple_repeat 5 63 0 1 1256 731 97 0 9 chr15 88014666 88014781 -15480193 + (GAAAA)n Simple_repeat Simple_repeat 3 116 0 2 1256 599 242 144 17 chr15 88015116 88015297 -15479677 - MT2A LTR ERVL 0 533 330 2 1256 480 241 175 24 chr15 88015249 88015415 -15479559 - MTE-int LTR MaLR -100 1480 1290 2 1256 639 286 40 45 chr15 88015447 88015645 -15479329 - MT2A LTR ERVL -198 335 139 2 1256 3330 291 78 14 chr15 88015662 88016602 -15478372 + MTE-int LTR MaLR 581 1580 0 2 1256 250 271 0 17 chr15 88016611 88016671 -15478303 + MTE2b LTR MaLR 38 96 -283 2 1256 775 303 94 0 chr15 88016913 88017147 -15477827 + MTE2b LTR MaLR 123 378 -1 2 1256 1160 47 47 0 chr15 88017260 88017432 -15477542 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 2 1256 1028 117 6 0 chr15 88017435 88017598 -15477376 + (TCC)n Simple_repeat Simple_repeat 3 166 0 2 1256 1398 256 58 14 chr15 88018521 88018882 -15476092 + MTEa LTR MaLR 3 379 0 2 1256 291 278 108 24 chr15 88021136 88021302 -15473672 - MER82 DNA MER2_type -473 180 1 2 1256 237 65 0 0 chr15 88023070 88023101 -15471873 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 1256 3987 75 12 0 chr15 88023118 88023625 -15471349 - L1_Mus1 LINE L1 -5 6562 6050 3 1256 317 301 152 14 chr15 88024028 88024166 -15470808 + HAL1-3A_ME LINE L1 2288 2444 -414 3 1256 459 0 0 0 chr15 88024166 88024217 -15470757 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 1256 420 321 41 55 chr15 88024267 88024412 -15470562 + MTD LTR MaLR 31 173 -246 3 1256 2294 228 82 0 chr15 88024420 88024893 -15470081 - MT2A LTR ERVL -21 512 1 3 1256 444 306 51 92 chr15 88024893 88025128 -15469846 + MTE2b LTR MaLR 143 365 -14 3 1256 378 306 176 39 chr15 88026511 88027407 -15467567 - L1M4 LINE L1 -628 5551 4509 3 1256 548 282 8 0 chr15 88027436 88027560 -15467414 + RSINE1 SINE B4 2 126 -39 3 1256 214 197 122 40 chr15 88027671 88027745 -15467229 + MIRc SINE MIR 70 149 -119 3 1256 208 228 181 48 chr15 88027805 88027888 -15467086 + MIRb SINE MIR 34 127 -141 3 1256 233 250 64 21 chr15 88028122 88028216 -15466758 - L1M4 LINE L1 -2227 3919 3822 3 1256 317 276 178 35 chr15 88028443 88028702 -15466272 - L1MC LINE L1 -2951 3195 2900 4 1256 252 317 54 12 chr15 88028707 88028873 -15466101 - L1M4 LINE L1 -3270 2876 2704 3 1256 673 265 42 21 chr15 88029290 88029305 -15465669 - B3A SINE B2 -5 193 178 4 1256 378 0 0 0 chr15 88029305 88029347 -15465627 + (TC)n Simple_repeat Simple_repeat 1 42 0 4 1256 673 265 42 21 chr15 88029347 88029520 -15465454 - B3A SINE B2 -21 177 1 4 1256 468 0 0 0 chr15 88031488 88031540 -15463434 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1256 610 274 41 0 chr15 88031541 88031687 -15463287 - B3A SINE B2 -46 152 1 4 1256 296 105 35 0 chr15 88031845 88031902 -15463072 + (TATG)n Simple_repeat Simple_repeat 2 60 0 4 1256 356 276 75 126 chr15 88031910 88032084 -15462890 - RSINE1 SINE B4 0 165 1 4 1256 253 333 67 13 chr15 88032202 88032351 -15462623 + MLT1B LTR MaLR 234 390 0 4 1256 260 293 12 24 chr15 88035894 88035978 -15458996 + CT-rich Low_complexity Low_complexity 3 85 0 4 1256 236 100 0 24 chr15 88035985 88036026 -15458948 + (CCCCCT)n Simple_repeat Simple_repeat 1 40 0 4 1256 285 330 9 9 chr15 88036075 88036188 -15458786 - MER89-int LTR ERV1 -5039 1762 1650 5 1256 495 331 44 0 chr15 88036594 88036730 -15458244 - RSINE1 SINE B4 -19 146 5 5 1256 204 40 0 0 chr15 88036732 88036757 -15458217 + (CAT)n Simple_repeat Simple_repeat 1 25 0 5 1256 432 340 69 58 chr15 88037652 88037999 -15456975 - MER89 LTR ERV1 -4 555 205 5 1256 261 0 0 0 chr15 88038446 88038475 -15456499 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 1256 417 103 0 0 chr15 88038583 88038651 -15456323 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 1256 335 300 0 0 chr15 88038781 88038861 -15456113 - ID4_ SINE ID -1 82 3 5 1256 449 179 91 36 chr15 88038885 88038995 -15455979 - B1F SINE Alu -2 147 32 5 1256 187 29 0 79 chr15 88039198 88039236 -15455738 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 5 1256 1419 250 69 123 chr15 88039765 88040449 -15454525 + Lx8 LINE L1 6827 7473 0 5 1256 617 282 24 43 chr15 88042000 88042169 -15452805 + B3 SINE B2 1 169 -47 5 1256 315 0 0 0 chr15 88042169 88042204 -15452770 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1256 617 282 24 43 chr15 88042204 88042245 -15452729 + B3 SINE B2 170 207 -9 5 1256 1065 137 0 0 chr15 88042353 88042626 -15452348 + (GGA)n Simple_repeat Simple_repeat 1 273 0 6 1256 519 56 0 0 chr15 88044326 88044397 -15450577 + (CCA)n Simple_repeat Simple_repeat 1 71 0 6 1256 584 362 23 0 chr15 88044806 88045027 -15449947 + L4 LINE RTE 654 879 -1150 6 1256 1852 118 161 0 chr15 88045416 88045696 -15449278 - ORR1A3 LTR MaLR -1 325 1 6 1256 237 250 26 65 chr15 88046325 88046402 -15448572 - ID2 SINE ID -1 82 9 6 1256 1255 118 96 19 chr15 88046606 88046814 -15448160 - URR1B DNA MER1_type -1 224 1 6 1256 984 240 5 5 chr15 88047115 88047324 -15447650 + B3 SINE B2 2 210 -6 6 1256 759 276 28 5 chr15 88047752 88047963 -15447011 - B3 SINE B2 0 216 1 6 1256 299 277 98 47 chr15 88049566 88049759 -15445215 - L1M4 LINE L1 -1381 5625 5423 6 1256 595 304 7 0 chr15 88049946 88050084 -15444890 - RSINE1 SINE B4 -25 140 2 7 1256 2173 100 45 60 chr15 88050086 88050417 -15444557 - ORR1A3 LTR MaLR 0 326 1 7 1256 371 250 19 39 chr15 88050518 88050622 -15444352 - L1MCa LINE L1 -4517 1991 1890 7 1256 401 122 0 13 chr15 88050622 88050697 -15444277 + (TA)n Simple_repeat Simple_repeat 2 75 0 7 1256 717 285 71 53 chr15 88050697 88051134 -15443840 - L1M4 LINE L1 -3218 3788 3344 6 1256 842 268 54 167 chr15 88051205 88051430 -15443544 + MTE2a LTR MaLR 1 203 -176 7 1256 409 31 0 58 chr15 88051430 88051499 -15443475 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 7 1256 842 268 54 167 chr15 88051499 88051698 -15443276 + MTE2a LTR MaLR 204 377 -2 7 1256 238 291 45 52 chr15 88051873 88052255 -15442719 - L1M4 LINE L1 -4041 2967 2587 6 1256 745 317 169 20 chr15 88052418 88053361 -15441613 - L1M4 LINE L1 -4681 2327 1230 6 1256 794 332 105 7 chr15 88053382 88053800 -15441174 - L1M4 LINE L1 -5728 1176 718 6 1256 473 234 23 40 chr15 88054081 88054255 -15440719 + GA-rich Low_complexity Low_complexity 1 171 0 7 1256 252 262 34 57 chr15 88054679 88054805 -15440169 - MLT2D LTR ERVL -8 555 430 7 1256 493 351 45 20 chr15 88054960 88055207 -15439767 + MLT2C1 LTR ERVL 18 270 -127 7 1256 626 320 166 26 chr15 88058149 88059106 -15435868 + L1MC3 LINE L1 6420 7510 -275 7 1256 371 288 50 139 chr15 88059321 88059354 -15435620 + L1MC3 LINE L1 7551 7582 -203 7 1256 1430 118 270 7 chr15 88059354 88059628 -15435346 + ORR1A1 LTR MaLR 1 346 0 8 1256 371 288 50 139 chr15 88059628 88059722 -15435252 + L1MC3 LINE L1 7583 7678 -107 7 1256 396 306 18 0 chr15 88059722 88059833 -15435141 + PB1D7 SINE Alu 1 113 -7 8 1256 371 288 50 139 chr15 88059833 88059962 -15435012 + L1MC3 LINE L1 7679 7785 0 7 1256 981 209 59 10 chr15 88061226 88061429 -15433545 - ORR1C2 LTR MaLR 0 384 172 8 1256 324 0 0 0 chr15 88063323 88063359 -15431615 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 1256 298 185 63 50 chr15 88063416 88063536 -15431438 + L1M3d LINE L1 1377 1496 -4807 8 1256 416 18 36 0 chr15 88063536 88063592 -15431382 + (CAGAGA)n Simple_repeat Simple_repeat 3 60 0 8 1256 298 185 63 50 chr15 88063592 88063630 -15431344 + L1M3d LINE L1 1497 1537 -4766 8 1256 704 323 0 0 chr15 88064077 88064241 -15430733 + RSINE1 SINE B4 2 165 0 8 1256 413 266 166 18 chr15 88064442 88064709 -15430265 + L1M3d LINE L1 2327 2626 -3750 8 1256 2190 253 126 46 chr15 88064763 88065667 -15429307 + RMER1C Other Other 2 1303 -39 8 1256 182 167 0 59 chr15 88065680 88065731 -15429243 + A-rich Low_complexity Low_complexity 1 48 0 8 1256 884 270 46 14 chr15 88065791 88066140 -15428834 + L1M3d LINE L1 3567 3926 -2450 8 1256 626 271 118 29 chr15 88066155 88066346 -15428628 + L1M3d LINE L1 3992 4198 -2178 8 1256 372 43 0 0 chr15 88066346 88066392 -15428582 + (CA)n Simple_repeat Simple_repeat 1 46 0 8 1256 626 271 118 29 chr15 88066392 88066549 -15428425 + L1M3d LINE L1 4199 4371 -2005 8 1256 557 271 54 74 chr15 88066700 88066903 -15428071 - MTEa LTR MaLR -17 362 164 9 1256 824 302 0 0 chr15 88067473 88067652 -15427322 - B3 SINE B2 -5 211 33 9 1256 1030 178 77 0 chr15 88067833 88068041 -15426933 + URR1A DNA MER1_type 3 226 0 9 1256 1139 255 49 32 chr15 88068486 88068855 -15426119 - MTEa LTR MaLR 0 379 5 9 1256 983 85 0 0 chr15 88069816 88069945 -15425029 + B1_Mus1 SINE Alu 11 139 -9 9 1256 627 81 0 0 chr15 88069945 88070044 -15424930 + (CAAAC)n Simple_repeat Simple_repeat 2 100 0 9 1256 2005 163 68 11 chr15 88070044 88070409 -15424565 - MTC LTR MaLR -35 386 1 9 1256 226 298 90 60 chr15 88070605 88070705 -15424269 - MTE-int LTR MaLR -42 1538 1436 9 1256 333 370 51 11 chr15 88070756 88070931 -15424043 - MLT2B1 LTR ERVL -13 554 373 9 1256 530 246 39 0 chr15 88071017 88071147 -15423827 - MLT2B4 LTR ERVL -419 137 3 9 1256 24 32 0 0 chr15 88071949 88071980 -15422994 + AT_rich Low_complexity Low_complexity 1 31 0 1 1256 367 320 125 11 chr15 88073132 88073345 -15421629 - MLT2B2 LTR ERVL -102 499 255 1 1256 249 239 111 14 chr15 88073368 88073440 -15421534 - MLT2B2 LTR ERVL -457 97 19 1 1256 183 219 104 52 chr15 88073684 88073761 -15421213 - L3 LINE CR1 -3348 1141 1061 1 1256 420 286 47 6 chr15 88074011 88074180 -15420794 + GA-rich Low_complexity Low_complexity 1 176 0 1 1256 1181 250 83 6 chr15 88074741 88075091 -15419883 + MTEb LTR MaLR 3 379 0 1 1256 275 369 17 12 chr15 88077078 88077314 -15417660 + (CATG)n Simple_repeat Simple_repeat 1 237 0 1 1256 2292 166 57 12 chr15 88079590 88079992 -15414982 - MTC LTR MaLR -1 420 1 1 19 1168 213 36 50 chr15 88080256 88080537 -15414437 - Lx6 LINE L1 -4 7456 7180 1 1257 540 30 0 0 chr15 88082757 88082823 -15412151 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 1257 377 335 59 11 chr15 88082854 88083126 -15411848 - L1MC4a LINE L1 -1933 5949 5665 1 1257 694 233 59 40 chr15 88083421 88083573 -15411401 + B3A SINE B2 2 156 -42 1 1257 306 0 0 0 chr15 88083587 88083621 -15411353 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1257 900 305 51 0 chr15 88083999 88084255 -15410719 + B4 SINE B4 1 269 -23 1 1257 453 62 0 0 chr15 88084255 88084320 -15410654 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 1257 1202 153 5 59 chr15 88084970 88085192 -15409782 + B3 SINE B2 2 211 -5 1 1257 481 281 42 35 chr15 88085857 88086001 -15408973 + RSINE1 SINE B4 2 146 -19 1 1257 302 306 106 86 chr15 88086054 88086404 -15408570 + L1MD LINE L1 3442 3798 -2348 1 1257 2684 107 46 48 chr15 88087421 88087875 -15407099 + RLTR11B LTR ERVK 1 453 0 1 1257 226 128 0 0 chr15 88088501 88088540 -15406434 + B4 SINE B4 1 39 -253 1 1257 1455 45 0 0 chr15 88088540 88088811 -15406163 + (CA)n Simple_repeat Simple_repeat 1 271 0 1 1257 398 272 46 39 chr15 88089495 88089648 -15405326 - RLTR42-int LTR ERVK -4122 1400 1247 1 1257 384 191 34 0 chr15 88089722 88089811 -15405163 + (CA)n Simple_repeat Simple_repeat 1 92 0 1 1257 842 106 5 43 chr15 88089816 88090003 -15404971 + (CATA)n Simple_repeat Simple_repeat 1 180 0 1 1257 361 136 17 0 chr15 88090038 88090097 -15404877 + HAL1-3A_ME LINE L1 1975 2034 -824 1 1257 255 217 0 0 chr15 88090358 88090418 -15404556 + C-rich Low_complexity Low_complexity 3 62 0 1 1257 551 330 101 35 chr15 88091651 88092078 -15402896 - L1MEg LINE L1 -4754 1330 876 1 1257 307 280 37 18 chr15 88092857 88092966 -15402008 - L1MB7 LINE L1 -9 7035 6925 1 1257 282 290 106 24 chr15 88092988 88093279 -15401695 - L1MB7 LINE L1 -827 6345 6032 1 1257 706 324 84 48 chr15 88093455 88093950 -15401024 - L1MB7 LINE L1 -1076 5930 5407 1 1257 721 214 308 24 chr15 88093950 88094242 -15400732 + MTE2b LTR MaLR 5 379 0 1 1257 706 324 84 48 chr15 88094242 88094392 -15400582 - L1MB7 LINE L1 -1600 5406 5262 1 1257 994 184 32 5 chr15 88094398 88094584 -15400390 - B3 SINE B2 -22 194 4 1 1257 406 290 96 34 chr15 88094669 88094908 -15400066 - Lx9 LINE L1 -33 7611 7358 1 1257 670 321 19 55 chr15 88094927 88095237 -15399737 + Lx9 LINE L1 7013 7311 -333 1 1257 413 336 81 19 chr15 88095248 88095509 -15399465 - L1MB7 LINE L1 -1772 5234 4958 1 1257 1975 151 11 49 chr15 88095521 88095889 -15399085 + ORR1B1 LTR MaLR 41 394 0 1 1257 1137 297 76 23 chr15 88095899 88096081 -15398893 + MTD LTR MaLR 6 198 -221 1 1257 221 0 0 33 chr15 88096081 88096111 -15398863 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1257 1137 297 76 23 chr15 88096111 88096321 -15398653 + MTD LTR MaLR 199 418 -1 1 1257 1383 311 103 29 chr15 88096325 88097481 -15397493 - L1MB7 LINE L1 -2052 4954 3713 1 1257 924 260 23 98 chr15 88097625 88097971 -15397003 - RLTR46 LTR ERVK 0 320 1 1 1257 1037 249 84 25 chr15 88098092 88098450 -15396524 - MTEb LTR MaLR 0 379 1 1 1257 1217 223 35 39 chr15 88098451 88098735 -15396239 - MTEb-int LTR MaLR -1 1579 1297 1 1257 3171 125 22 8 chr15 88098735 88099234 -15395740 - Lx4B LINE L1 -823 6235 5730 1 1257 4477 143 66 5 chr15 88099234 88099993 -15394981 + Lx4B LINE L1 6235 7039 -19 1 1257 2116 279 150 30 chr15 88100059 88100950 -15394024 - MTEb-int LTR MaLR -242 1128 203 1 1257 565 295 25 25 chr15 88100981 88101141 -15393833 - RSINE1 SINE B4 -4 161 2 1 1257 849 232 84 76 chr15 88101141 88101376 -15393598 - MTEb-int LTR MaLR -1343 237 1 1 1257 873 301 44 50 chr15 88101394 88101737 -15393237 + MTD LTR MaLR 7 347 -72 1 1257 1032 241 81 0 chr15 88101858 88102094 -15392880 - MTEb LTR MaLR -120 259 5 1 1257 13235 170 21 40 chr15 88102384 88104171 -15390803 - L1_Mur2 LINE L1 -33 5844 4068 1 1257 663 37 0 0 chr15 88104171 88104253 -15390721 + (GA)n Simple_repeat Simple_repeat 1 82 0 1 1257 13235 170 21 40 chr15 88104253 88105150 -15389824 - L1_Mur2 LINE L1 -1810 4067 3210 1 1257 566 248 181 80 chr15 88105177 88105768 -15389206 - L1MB7 LINE L1 -4046 3288 2638 1 1257 1262 238 138 24 chr15 88105955 88106295 -15388679 - MTD LTR MaLR -3 416 38 1 1257 1323 282 41 24 chr15 88106339 88106677 -15388297 + MTE2b LTR MaLR 25 368 -11 1 1257 854 275 50 21 chr15 88106818 88107056 -15387918 + B4 SINE B4 46 290 -2 1 1257 802 260 58 5 chr15 88107097 88107302 -15387672 + B3 SINE B2 1 216 0 1 1257 1091 302 83 31 chr15 88107455 88108069 -15386905 + L1M4 LINE L1 323 968 -5574 1 1257 231 392 18 61 chr15 88108069 88108183 -15386791 + ORR1E LTR MaLR 1 109 -270 1 1257 282 333 116 45 chr15 88108297 88108495 -15386479 + ORR1E LTR MaLR 101 312 -47 1 1257 373 332 96 51 chr15 88108525 88108978 -15385996 - MLT2B3 LTR ERVL -20 534 31 1 1257 255 327 35 0 chr15 88109058 88109171 -15385803 + B1F1 SINE Alu 10 126 -23 1 1257 334 328 89 11 chr15 88109311 88109502 -15385472 + MTE-int LTR MaLR 73 278 -1302 1 1257 565 271 83 83 chr15 88109487 88109692 -15385282 - MTEa LTR MaLR -16 363 159 1 1257 522 139 0 0 chr15 88109692 88109778 -15385196 + (TC)n Simple_repeat Simple_repeat 1 86 0 1 1257 439 308 26 71 chr15 88109778 88109932 -15385042 - MTEa LTR MaLR -232 147 1 1 1257 2428 318 123 48 chr15 88109940 88110966 -15384008 + MTE-int LTR MaLR 266 1363 -217 1 1257 575 62 0 12 chr15 88110966 88111047 -15383927 + (TTTC)n Simple_repeat Simple_repeat 1 80 0 1 1257 2428 318 123 48 chr15 88111047 88111227 -15383747 + MTE-int LTR MaLR 1364 1562 -18 1 1257 385 341 57 99 chr15 88111216 88111548 -15383426 + ORR1E LTR MaLR 38 355 -4 1 1257 1264 281 40 50 chr15 88111660 88112064 -15382910 - MTD LTR MaLR 0 419 20 1 1257 529 236 65 43 chr15 88112136 88112366 -15382608 + L1M4 LINE L1 1127 1361 -5181 1 1257 1156 62 7 7 chr15 88112486 88112633 -15382341 - B1_Mus1 SINE Alu -1 147 1 1 1257 951 226 46 17 chr15 88112782 88113020 -15381954 - ORR1D2 LTR MaLR -125 245 1 1 1257 189 0 0 0 chr15 88113621 88113642 -15381332 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 1257 426 309 0 29 chr15 88114321 88114473 -15380501 + (TGAG)n Simple_repeat Simple_repeat 3 150 0 1 1257 249 33 0 0 chr15 88114473 88114503 -15380471 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 1 1257 426 309 0 29 chr15 88114503 88114523 -15380451 + (TGAG)n Simple_repeat Simple_repeat 3 22 0 1 1257 872 255 35 57 chr15 88114727 88114956 -15380018 + B4A SINE B4 55 278 -14 1 1257 239 283 0 0 chr15 88115509 88115569 -15379405 + MER31A LTR ERV1 5 64 -421 1 1257 387 0 0 0 chr15 88115571 88115614 -15379360 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1257 542 283 101 27 chr15 88115639 88115897 -15379077 + MER31A LTR ERV1 140 416 -69 1 1257 801 243 247 16 chr15 88116739 88116990 -15377984 - MTEa LTR MaLR -5 374 66 1 1257 774 147 79 43 chr15 88116996 88117160 -15377814 - RLTR26 LTR ERVK -472 170 1 1 1257 319 125 0 0 chr15 88117164 88117212 -15377762 - MTEa LTR MaLR -331 48 1 1 1257 1956 192 13 51 chr15 88117271 88117661 -15377313 - ORR1C1 LTR MaLR 0 378 4 1 1257 372 276 83 40 chr15 88117670 88117849 -15377125 + MLT1B LTR MaLR 178 364 -1 1 1257 252 302 140 75 chr15 88119080 88119359 -15375615 - MLT1A0 LTR MaLR -3 621 325 1 1257 530 225 218 30 chr15 88119709 88119874 -15375100 + B3A SINE B2 1 196 -2 1 1257 537 30 0 0 chr15 88120136 88120203 -15374771 + B1_Mm SINE Alu 81 147 0 1 1257 459 278 69 3 chr15 88120533 88120706 -15374268 - MLT1A0 LTR MaLR -163 211 21 1 1257 263 310 156 142 chr15 88120780 88121062 -15373912 + B4 SINE B4 2 287 -5 1 1257 189 107 0 0 chr15 88121084 88121112 -15373862 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1257 23 0 0 0 chr15 88121150 88121173 -15373801 + AT_rich Low_complexity Low_complexity 1 23 0 1 1257 291 28 0 0 chr15 88122200 88122236 -15372738 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1257 613 216 126 40 chr15 88122401 88122599 -15372375 - B3 SINE B2 -1 215 1 1 1257 609 276 52 10 chr15 88122634 88122828 -15372146 + B3 SINE B2 2 203 -13 1 1257 22 56 0 0 chr15 88122830 88122866 -15372108 + AT_rich Low_complexity Low_complexity 1 36 0 1 1257 230 362 8 121 chr15 88123819 88123951 -15371023 - Tigger5 DNA MER2_type -2201 205 89 1 1257 357 149 0 0 chr15 88123975 88124042 -15370932 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 1257 235 262 33 0 chr15 88124089 88124150 -15370824 - ID SINE ID -151 73 11 1 1257 234 0 0 0 chr15 88124260 88124286 -15370688 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1257 515 291 78 19 chr15 88124310 88124464 -15370510 - B4A SINE B4 -127 165 3 1 1257 231 314 23 0 chr15 88124819 88124905 -15370069 - L1M4 LINE L1 -407 5757 5670 1 1257 606 211 37 0 chr15 88124928 88125089 -15369885 - Lx9 LINE L1 -1 7643 7477 1 1257 303 93 0 0 chr15 88125095 88125138 -15369836 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 1 1257 2180 201 65 13 chr15 88125153 88125626 -15369348 - Lx9 LINE L1 -127 7517 7020 1 1257 326 274 50 80 chr15 88125724 88125914 -15369060 - L1M4 LINE L1 -1832 4314 4130 1 1257 939 180 78 20 chr15 88126261 88126465 -15368509 - B3 SINE B2 0 216 1 1 1257 486 0 0 0 chr15 88126553 88126607 -15368367 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1257 340 275 119 79 chr15 88126924 88127267 -15367707 - L1M4 LINE L1 -2889 3257 2901 1 1257 234 239 0 0 chr15 88127308 88127354 -15367620 - PB1D10 SINE Alu -32 85 40 1 1257 2300 76 76 0 chr15 88127382 88127686 -15367288 + ORR1A2 LTR MaLR 1 327 0 1 1257 1045 298 45 34 chr15 88127754 88128226 -15366748 - L1MD LINE L1 -3280 2866 2390 1 1257 366 80 0 0 chr15 88128946 88128996 -15365978 + (TCC)n Simple_repeat Simple_repeat 3 52 0 1 1257 240 111 0 0 chr15 88129979 88130015 -15364959 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 1 1257 278 260 167 0 chr15 88133281 88133377 -15361597 - MER74A LTR ERVL -440 118 7 1 1257 416 300 88 25 chr15 88133804 88134122 -15360852 + L1MB3 LINE L1 5838 6175 -8 1 1257 871 202 34 34 chr15 88134194 88134373 -15360601 - B3 SINE B2 -36 180 2 1 1257 796 276 151 60 chr15 88135588 88135913 -15359061 - MTE2a LTR MaLR -7 372 11 1 1257 527 286 151 21 chr15 88135919 88135997 -15358977 + MLT1B LTR MaLR 42 136 -254 1 1257 2974 51 81 0 chr15 88135997 88136367 -15358607 + MTB LTR MaLR 1 400 0 1 1257 527 286 151 21 chr15 88136367 88136527 -15358447 + MLT1B LTR MaLR 137 311 -79 1 1257 375 89 0 0 chr15 88137522 88137578 -15357396 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 1257 246 105 0 0 chr15 88138341 88138379 -15356595 + (CAGA)n Simple_repeat Simple_repeat 3 40 0 2 1257 1036 117 33 7 chr15 88138431 88138860 -15356114 + (TAGA)n Simple_repeat Simple_repeat 1 439 0 2 1257 345 318 67 48 chr15 88139268 88139433 -15355541 + L1M5 LINE L1 3779 3946 -2200 2 1257 1026 266 60 45 chr15 88139434 88139765 -15355209 - MTEa LTR MaLR -42 337 2 2 1257 483 18 0 0 chr15 88140534 88140590 -15354384 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 1257 259 323 131 97 chr15 88142131 88142481 -15352493 - MLT1A0 LTR MaLR -3 362 1 2 1257 1000 288 88 6 chr15 88142536 88142878 -15352096 - ORR1D2 LTR MaLR 0 370 1 2 1257 475 279 11 0 chr15 88143380 88143500 -15351474 - B4A SINE B4 -86 206 85 2 1257 468 0 0 0 chr15 88143513 88143565 -15351409 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1257 302 280 0 39 chr15 88143597 88143675 -15351299 - B4 SINE B4 -214 78 4 2 1257 466 333 83 40 chr15 88144152 88144430 -15350544 - MLT1D LTR MaLR -16 489 200 2 1257 515 336 96 8 chr15 88144598 88144859 -15350115 + MER2 DNA MER2_type 12 295 -50 2 1257 450 0 0 0 chr15 88145045 88145095 -15349879 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 1257 198 0 0 0 chr15 88145127 88145149 -15349825 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 1257 522 31 0 0 chr15 88145149 88145212 -15349762 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 1257 396 0 0 0 chr15 88146536 88146580 -15348394 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 2 1257 615 279 313 40 chr15 88148072 88148522 -15346452 + RMER15 LTR ERVL 4 575 0 2 1257 261 284 140 13 chr15 88149025 88149182 -15345792 - L1MB7 LINE L1 -104 6080 5904 2 1257 677 195 44 31 chr15 88149184 88149343 -15345631 + B2_Mm2 SINE B2 35 195 0 2 1257 3827 85 40 56 chr15 88149355 88149927 -15345047 - RMER2 LTR ERV1 -4 563 1 2 1257 573 263 75 0 chr15 88149939 88150072 -15344902 + B1_Mur2 SINE Alu 2 144 -5 2 1257 687 297 17 6 chr15 88150128 88150304 -15344670 - B3A SINE B2 -20 178 1 2 1257 413 276 131 83 chr15 88151139 88151200 -15343774 + CYRA11_Mm Unknown Y-chromosome 99 319 -298 2 1257 1326 140 13 45 chr15 88151200 88151424 -15343550 - URR1A DNA MER1_type -9 217 1 2 1257 413 276 131 83 chr15 88151424 88151451 -15343523 + CYRA11_Mm Unknown Y-chromosome 320 425 -192 2 1257 1638 240 64 8 chr15 88151906 88152263 -15342711 + MTD LTR MaLR 2 378 -41 2 1257 339 25 0 0 chr15 88152265 88152305 -15342669 + (GGA)n Simple_repeat Simple_repeat 3 42 0 2 1257 2583 41 3 0 chr15 88152394 88152709 -15342265 - MTA_Mm LTR MaLR -80 316 1 2 1257 328 292 35 99 chr15 88156342 88156513 -15338461 - L1M5 LINE L1 -2505 3641 3482 2 1257 391 214 12 36 chr15 88156577 88156742 -15338232 + (TA)n Simple_repeat Simple_repeat 1 161 0 2 1257 318 229 40 30 chr15 88156735 88156834 -15338140 + (CAGAGA)n Simple_repeat Simple_repeat 4 103 0 2 1257 792 169 0 0 chr15 88156834 88157012 -15337962 + GA-rich Low_complexity Low_complexity 2 179 0 2 1257 276 77 0 0 chr15 88157024 88157063 -15337911 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 2 1257 886 229 53 0 chr15 88157071 88157259 -15337715 + B3 SINE B2 14 211 -5 2 1257 407 292 125 38 chr15 88157267 88157427 -15337547 - L1MD LINE L1 -2769 3377 3204 2 1257 281 248 50 25 chr15 88157569 88157689 -15337285 - MusHAL1 LINE L1 -926 1786 1664 2 1257 22 0 0 0 chr15 88157839 88157861 -15337113 + AT_rich Low_complexity Low_complexity 1 22 0 2 1257 964 176 61 9 chr15 88157927 88158139 -15336835 + Lx5 LINE L1 6827 7049 -1 2 1257 305 205 0 44 chr15 88159528 88159715 -15335259 + GA-rich Low_complexity Low_complexity 1 178 0 2 1257 920 124 11 11 chr15 88159716 88159896 -15335078 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 2 1257 1266 111 10 21 chr15 88160745 88160939 -15334035 + B2_Mm1t SINE B2 2 193 0 2 1257 731 244 132 27 chr15 88162670 88162927 -15332047 + RMER20B LTR ERVK 122 405 -222 2 1257 887 277 25 94 chr15 88163036 88163442 -15331532 - MTE2a LTR MaLR 0 379 2 2 1257 10631 130 63 33 chr15 88163442 88164160 -15330814 + Lx7 LINE L1 1335 2057 -3823 2 1257 450 0 0 0 chr15 88164160 88164210 -15330764 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1257 2893 45 112 0 chr15 88164210 88164586 -15330388 + BGLII LTR ERVK 4 421 0 2 1257 10631 130 63 33 chr15 88164586 88164901 -15330073 + Lx7 LINE L1 2058 2395 -3485 2 1257 185 0 40 0 chr15 88164901 88164926 -15330048 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 2 1257 11709 188 54 48 chr15 88164926 88166033 -15328941 + Lx7 LINE L1 2393 3525 -4171 2 1257 2727 72 10 11 chr15 88166033 88166416 -15328558 + ORR1A0 LTR MaLR 1 374 0 2 1257 11709 188 54 48 chr15 88166416 88169806 -15325168 + Lx7 LINE L1 3526 6998 -698 2 1257 610 193 0 93 chr15 88169804 88169987 -15324987 + Lx7 LINE L1 7372 7537 -159 2 1257 498 330 6 22 chr15 88170437 88170620 -15324354 + B3A SINE B2 3 182 -16 2 1257 342 0 0 0 chr15 88170657 88170695 -15324279 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1257 340 275 70 109 chr15 88171040 88171342 -15323632 - L1ME2z LINE L1 -482 5962 5673 2 1257 314 371 59 34 chr15 88171419 88171656 -15323318 - L1MC LINE L1 -1904 4242 4000 2 1257 291 197 153 14 chr15 88171662 88171734 -15323240 - PB1D10 SINE Alu -18 99 18 2 1257 422 316 25 40 chr15 88171893 88172094 -15322880 - Lx9 LINE L1 -380 7264 7067 2 1257 795 212 30 7 chr15 88172094 88172271 -15322703 + B3 SINE B2 1 176 -22 2 1257 183 42 0 0 chr15 88172271 88172295 -15322679 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 1257 578 251 26 77 chr15 88172295 88172311 -15322663 + B2_Mm2 SINE B2 170 184 -11 2 1257 785 239 44 5 chr15 88172315 88172521 -15322453 - Lx9 LINE L1 -618 7026 6813 2 1257 318 236 57 6 chr15 88172657 88172852 -15322122 + (TA)n Simple_repeat Simple_repeat 1 204 0 2 1257 399 300 18 26 chr15 88172905 88173018 -15321956 + RSINE1 SINE B4 33 144 -21 2 1257 711 35 0 0 chr15 88173042 88173128 -15321846 + (CA)n Simple_repeat Simple_repeat 2 87 0 2 1257 595 282 8 0 chr15 88173234 88173365 -15321609 + B1_Mur2 SINE Alu 16 147 -2 2 1257 213 94 0 0 chr15 88173408 88173440 -15321534 + (CATG)n Simple_repeat Simple_repeat 3 34 0 2 1257 438 258 0 0 chr15 88173454 88173543 -15321431 - B3 SINE B2 -127 89 1 2 1257 296 324 107 2 chr15 88173622 88173937 -15321037 - L1M3 LINE L1 -3134 3012 2657 2 1257 414 0 0 0 chr15 88174939 88174985 -15319989 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1257 1243 41 0 0 chr15 88175146 88175293 -15319681 + B1_Mm SINE Alu 1 147 0 2 1257 207 94 0 0 chr15 88175293 88175319 -15319655 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1257 2442 122 54 8 chr15 88175425 88175798 -15319176 + ORR1B1 LTR MaLR 5 394 0 2 1257 236 169 33 33 chr15 88176008 88176069 -15318905 - L1M4 LINE L1 -531 5643 5583 2 1257 309 347 114 24 chr15 88176316 88176727 -15318247 - L1M4 LINE L1 -895 5251 4804 2 1257 675 67 0 0 chr15 88177725 88177814 -15317160 + (TTTC)n Simple_repeat Simple_repeat 1 89 0 2 1257 477 62 0 0 chr15 88177814 88177878 -15317096 + (CA)n Simple_repeat Simple_repeat 1 65 0 2 1257 362 375 17 45 chr15 88178136 88178312 -15316662 - MLT1F LTR MaLR -237 311 141 2 1257 498 297 83 20 chr15 88178670 88178924 -15316050 - Charlie1b DNA MER1_type -100 423 154 2 1257 228 143 0 0 chr15 88179261 88179303 -15315671 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1257 307 293 60 10 chr15 88184027 88184127 -15310847 + L1MD3 LINE L1 6978 7082 -913 2 1257 580 147 34 8 chr15 88184152 88184385 -15310589 + (TAGA)n Simple_repeat Simple_repeat 1 239 0 2 1257 254 319 8 34 chr15 88184620 88184737 -15310237 + L1MD3 LINE L1 7768 7881 -1 2 1257 22 0 0 0 chr15 88186134 88186156 -15308818 + AT_rich Low_complexity Low_complexity 1 22 0 2 1257 2013 156 127 8 chr15 88186162 88186531 -15308443 + MTC LTR MaLR 1 413 -8 2 1257 531 0 0 0 chr15 88186536 88186595 -15308379 + (TG)n Simple_repeat Simple_repeat 1 59 0 2 1257 276 355 39 66 chr15 88186599 88186780 -15308194 - B3A SINE B2 -18 180 5 2 1257 362 221 11 0 chr15 88186925 88187020 -15307954 + (CA)n Simple_repeat Simple_repeat 2 97 0 2 1257 501 147 8 37 chr15 88187021 88187123 -15307851 - MTC LTR MaLR -8 413 278 2 1257 306 125 0 0 chr15 88187213 88187261 -15307713 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1257 518 304 12 30 chr15 88187609 88187775 -15307199 + MTC LTR MaLR 12 174 -247 2 1257 1899 145 26 13 chr15 88187781 88188088 -15306886 + ORR1A3 LTR MaLR 16 326 0 2 1257 643 273 92 42 chr15 88188097 88188357 -15306617 - MLT1B LTR MaLR -9 381 109 2 1257 4175 181 65 3 chr15 88188357 88189096 -15305878 - Lx7 LINE L1 -618 7078 6294 2 1257 2128 201 73 18 chr15 88189100 88189343 -15305631 + Lx7 LINE L1 7163 7424 -272 2 1257 309 89 0 0 chr15 88189343 88189388 -15305586 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1257 2128 201 73 18 chr15 88189388 88189650 -15305324 + Lx7 LINE L1 7425 7695 -1 2 1257 1241 54 0 0 chr15 88189669 88189816 -15305158 + B1_Mm SINE Alu 1 147 0 2 1257 236 192 0 0 chr15 88189818 88189870 -15305104 + A-rich Low_complexity Low_complexity 1 52 0 2 1257 309 51 0 0 chr15 88190322 88190361 -15304613 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1257 1187 264 22 99 chr15 88190361 88190757 -15304217 - MTE2a LTR MaLR -13 366 2 2 1257 459 302 237 10 chr15 88192880 88193184 -15301790 - MLT1A LTR MaLR -1 373 1 2 1257 321 283 126 169 chr15 88194013 88194379 -15300595 - MLT1C LTR MaLR -16 451 25 2 1257 200 344 11 11 chr15 88194931 88195025 -15299949 + GA-rich Low_complexity Low_complexity 5 98 0 2 1257 465 19 0 0 chr15 88195071 88195125 -15299849 + (TTTTG)n Simple_repeat Simple_repeat 4 57 0 2 1257 1389 45 45 0 chr15 88195244 88195420 -15299554 - MusHAL1 LINE L1 -1163 1549 1366 2 1257 5954 85 1 4 chr15 88195399 88196179 -15298795 - L1VL4 LINE L1 -5315 987 210 2 1257 333 82 0 0 chr15 88196412 88196461 -15298513 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1257 585 216 92 5 chr15 88196936 88197065 -15297909 + B3 SINE B2 1 132 -84 2 1257 474 18 0 0 chr15 88197065 88197120 -15297854 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 1257 499 226 114 76 chr15 88197120 88197148 -15297826 + B2_Mm2 SINE B2 130 164 -31 2 1257 370 356 52 57 chr15 88197788 88198017 -15296957 + Tigger5 DNA MER2_type 10 237 -2169 2 1257 689 276 41 32 chr15 88198307 88198528 -15296446 + ID_B1 SINE B4 2 224 0 3 1257 1050 182 59 0 chr15 88198634 88198821 -15296153 + B3 SINE B2 2 199 -17 3 1257 228 263 0 73 chr15 88199181 88199263 -15295711 + L1MC LINE L1 3918 3993 -2153 3 1257 263 299 110 18 chr15 88199540 88199649 -15295325 + Lx8 LINE L1 7107 7225 -248 3 1257 229 255 45 18 chr15 88200675 88200787 -15294187 + L1M5 LINE L1 4463 4577 -1569 3 1257 278 265 44 0 chr15 88201356 88201424 -15293550 + MER92C LTR ERV1 270 340 -214 3 1257 1228 182 18 0 chr15 88201450 88201670 -15293304 + URR1B DNA MER1_type 1 224 -1 3 1257 345 118 0 0 chr15 88203693 88203744 -15291230 - HAL1-3A_ME LINE L1 -832 2026 1976 3 1257 712 148 11 11 chr15 88203745 88203923 -15291051 + (TCTG)n Simple_repeat Simple_repeat 1 178 0 3 1257 435 262 0 0 chr15 88203925 88204051 -15290923 + (TG)n Simple_repeat Simple_repeat 1 126 0 3 1257 402 321 100 31 chr15 88204091 88204351 -15290623 - MLT2C2 LTR ERVL -175 289 12 3 1257 337 343 0 0 chr15 88205057 88205156 -15289818 + CT-rich Low_complexity Low_complexity 3 101 0 3 1257 375 260 19 74 chr15 88206351 88206513 -15288461 + Lx9 LINE L1 7341 7493 -151 3 1257 22 0 0 0 chr15 88206582 88206604 -15288370 + AT_rich Low_complexity Low_complexity 1 22 0 3 1257 2282 213 31 5 chr15 88206706 88207150 -15287824 + Lx2B LINE L1 6428 6883 -117 3 1257 559 227 135 13 chr15 88207150 88207306 -15287668 - B4A SINE B4 -71 221 47 3 1257 230 279 62 31 chr15 88207810 88208002 -15286972 - L1MC LINE L1 -3016 3130 2933 3 1257 3149 16 8 21 chr15 88208195 88208574 -15286400 - L1Md_F2 LINE L1 0 6582 6209 3 1257 626 94 85 25 chr15 88209608 88209740 -15285234 - ORR1A2 LTR MaLR -241 133 1 3 1258 362 283 9 19 chr15 88211478 88211586 -15283388 + PB1D10 SINE Alu 11 117 0 3 1258 1343 76 16 32 chr15 88211592 88211782 -15283192 + B2_Mm2 SINE B2 2 188 -7 3 1258 965 9 0 9 chr15 88211783 88211898 -15283076 + (GAAA)n Simple_repeat Simple_repeat 3 116 0 3 1258 684 265 146 5 chr15 88214405 88214617 -15280357 + ORR1D2 LTR MaLR 103 344 -26 3 1258 189 107 0 0 chr15 88214617 88214645 -15280329 + (CAA)n Simple_repeat Simple_repeat 3 30 0 3 1258 276 53 0 0 chr15 88214855 88214893 -15280081 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1258 1288 238 7 11 chr15 88214896 88215168 -15279806 - B4A SINE B4 -20 272 2 3 1258 993 271 50 40 chr15 88215687 88215710 -15279264 + B4 SINE B4 13 34 -258 3 1258 1356 176 153 35 chr15 88215710 88216082 -15278892 + MTD LTR MaLR 2 417 -2 3 1258 993 271 50 40 chr15 88216082 88216335 -15278639 + B4 SINE B4 35 292 0 3 1258 428 100 0 28 chr15 88216339 88216411 -15278563 + (CATA)n Simple_repeat Simple_repeat 1 70 0 3 1258 2953 43 0 3 chr15 88218262 88218609 -15276365 + ORR1A0 LTR MaLR 1 346 0 3 1258 14435 47 7 2 chr15 88218609 88220390 -15274584 + ORR1A0-int LTR MaLR 1 1790 -2 3 1258 2636 29 0 3 chr15 88220390 88220702 -15274272 + ORR1A0 LTR MaLR 36 346 0 3 1258 647 316 153 17 chr15 88221970 88222386 -15272588 - MER44B DNA MER2_type -66 484 6 3 1258 851 260 4 61 chr15 88222885 88223114 -15271860 - B3 SINE B2 0 216 1 3 1258 963 63 0 0 chr15 88223617 88223744 -15271230 + (TCC)n Simple_repeat Simple_repeat 3 129 0 3 1258 339 197 28 0 chr15 88224497 88224568 -15270406 - MLT1I LTR MaLR 0 411 339 3 1258 3111 26 0 0 chr15 88225812 88226158 -15268816 + ORR1A0 LTR MaLR 1 346 0 3 1258 453 36 0 0 chr15 88226204 88226259 -15268715 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1258 294 274 273 31 chr15 88226267 88226395 -15268579 - RSINE1 SINE B4 -4 161 3 3 1258 384 314 110 62 chr15 88226486 88226795 -15268179 + L1M5 LINE L1 2257 2580 -3566 3 1258 442 336 23 0 chr15 88226810 88226941 -15268033 + MER58A DNA MER1_type 4 137 -87 3 1258 285 288 188 5 chr15 88227117 88227330 -15267644 + L1M5 LINE L1 2699 2950 -3196 3 1258 700 289 58 29 chr15 88227907 88228185 -15266789 + L1M5 LINE L1 3699 3984 -2162 3 1258 303 324 149 28 chr15 88228183 88228504 -15266470 + L1M5 LINE L1 4738 5097 -1049 3 1258 444 239 5 14 chr15 88228730 88229162 -15265812 + (CA)n Simple_repeat Simple_repeat 1 427 0 3 1258 185 143 0 28 chr15 88230252 88230288 -15264686 - L4 LINE RTE -1086 943 909 3 1258 528 126 0 0 chr15 88230882 88230969 -15264005 + (CA)n Simple_repeat Simple_repeat 1 87 0 3 1258 648 158 0 0 chr15 88232856 88232989 -15261985 + (CAGAGA)n Simple_repeat Simple_repeat 6 138 0 3 1258 1281 152 0 3 chr15 88233146 88233429 -15261545 + (TGGA)n Simple_repeat Simple_repeat 1 282 0 3 1258 1053 251 132 20 chr15 88236133 88236474 -15258500 - MTE2a LTR MaLR 0 379 1 3 1258 254 29 29 0 chr15 88236590 88236625 -15258349 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1258 211 182 0 0 chr15 88237616 88237649 -15257325 + polypurine Low_complexity Low_complexity 3 35 0 3 1258 407 35 18 0 chr15 88238265 88238322 -15256652 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 1258 255 277 84 92 chr15 88238335 88238527 -15256447 + RMER12 LTR ERVK 771 964 -358 3 1258 304 333 131 6 chr15 88238527 88238549 -15256425 - B3A SINE B2 -18 180 159 3 1258 381 93 0 0 chr15 88238549 88238603 -15256371 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 1258 304 333 131 6 chr15 88238603 88238740 -15256234 - B3A SINE B2 -40 158 1 3 1258 255 277 84 92 chr15 88238740 88238809 -15256165 + RMER12 LTR ERVK 965 1030 -292 3 1258 1513 252 40 43 chr15 88240025 88240191 -15254783 + MTEa LTR MaLR 6 162 -217 3 1258 1656 96 31 23 chr15 88240191 88240448 -15254526 - L1Md_F2 LINE L1 0 6582 6324 3 1258 1513 252 40 43 chr15 88240448 88240625 -15254349 + MTEa LTR MaLR 163 338 -41 3 1258 664 43 0 21 chr15 88240625 88240719 -15254255 + (GTTTG)n Simple_repeat Simple_repeat 2 93 0 3 1258 1513 252 40 43 chr15 88240719 88240747 -15254227 + MTEa LTR MaLR 339 377 -2 3 1258 2325 178 5 28 chr15 88241736 88242158 -15252816 - MTD LTR MaLR -7 412 1 3 1258 1740 166 116 77 chr15 88242344 88242723 -15252251 + ORR1B1 LTR MaLR 1 394 0 3 1258 1954 211 30 5 chr15 88243075 88243470 -15251504 + MTD LTR MaLR 1 405 -14 3 1258 814 216 9 31 chr15 88244501 88244749 -15250225 + ORR1D1 LTR MaLR 82 379 0 3 1258 494 276 23 16 chr15 88246529 88246658 -15248316 + ID_B1 SINE B4 6 135 -89 3 1258 306 308 75 28 chr15 88246608 88246715 -15248259 + PB1D7 SINE Alu 7 118 -2 3 1258 209 195 0 0 chr15 88247390 88247431 -15247543 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1258 374 139 14 0 chr15 88247970 88248042 -15246932 + GA-rich Low_complexity Low_complexity 3 75 0 3 1258 270 333 27 0 chr15 88248778 88248889 -15246085 + PB1D10 SINE Alu 3 116 -1 3 1258 378 307 170 42 chr15 88248931 88249196 -15245778 + HAL1-3A_ME LINE L1 2140 2438 -420 3 1258 510 91 0 0 chr15 88249200 88249277 -15245697 + (GGGA)n Simple_repeat Simple_repeat 2 78 0 3 1258 327 339 14 117 chr15 88249814 88250274 -15244700 - L1M5 LINE L1 -2700 3446 3045 3 1258 702 278 94 94 chr15 88250525 88250963 -15244011 + RMER15 LTR ERVL 1 566 -9 3 1258 858 272 92 23 chr15 88251877 88252137 -15242837 - ORR1E LTR MaLR -2 357 80 3 1258 4806 120 4 4 chr15 88252137 88252816 -15242158 - L1VL4 LINE L1 -5623 679 1 3 1258 414 253 11 0 chr15 88252821 88252912 -15242062 - ORR1E LTR MaLR -267 92 1 3 1258 3459 285 83 44 chr15 88252912 88254276 -15240698 - ORR1E-int LTR MaLR -53 1527 6 3 1258 493 169 10 15 chr15 88254279 88254377 -15240597 - ORR1E LTR MaLR 0 379 268 3 1258 211 278 31 0 chr15 88254410 88254507 -15240467 + (TAGA)n Simple_repeat Simple_repeat 2 101 0 3 1258 1273 240 75 35 chr15 88254510 88254911 -15240063 + MTD LTR MaLR 1 417 -2 3 1258 1326 19 30 0 chr15 88254938 88255204 -15239770 + (TAGA)n Simple_repeat Simple_repeat 1 274 0 3 1258 1336 6 44 0 chr15 88255226 88256398 -15238576 + (TAGA)n Simple_repeat Simple_repeat 1 1223 0 3 1258 209 234 30 45 chr15 88257392 88257459 -15237515 + L3 LINE CR1 4127 4192 -297 3 1258 396 0 0 0 chr15 88257485 88257529 -15237445 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1258 231 204 0 22 chr15 88257830 88257875 -15237099 + G-rich Low_complexity Low_complexity 2 45 0 3 1258 414 0 0 0 chr15 88261488 88261534 -15233440 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1258 1290 258 72 61 chr15 88262884 88263243 -15231731 - MTE2b LTR MaLR -14 365 3 3 1258 717 220 36 0 chr15 88263715 88263893 -15231081 - B3 SINE B2 -3 195 2 3 1258 316 315 27 5 chr15 88263952 88264051 -15230923 - B3A SINE B2 -116 100 1 3 1258 504 215 58 13 chr15 88264074 88264215 -15230759 - MTD LTR MaLR 0 419 265 3 1258 197 336 104 69 chr15 88266364 88266508 -15228466 + MIR3 SINE MIR 15 163 -45 3 1258 907 104 0 0 chr15 88267179 88267304 -15227670 + B2_Mm2 SINE B2 1 125 -70 3 1258 351 333 72 26 chr15 88268305 88268499 -15226475 - MER89 LTR ERV1 -280 279 77 3 1258 1903 201 57 18 chr15 88269648 88270049 -15224925 + MTD LTR MaLR 3 419 0 3 1258 1181 275 26 60 chr15 88270402 88270750 -15224224 + MTE2a LTR MaLR 43 378 -1 3 1258 366 263 13 0 chr15 88271076 88271152 -15223822 + B4 SINE B4 1 77 -215 3 1258 1101 123 0 0 chr15 88271190 88271369 -15223605 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 1258 855 290 43 82 chr15 88271413 88271758 -15223216 + RLTR26 LTR ERVK 12 410 -217 3 1258 216 0 0 0 chr15 88271911 88271935 -15223039 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1258 697 297 80 25 chr15 88271958 88272158 -15222816 + B4 SINE B4 80 290 -2 3 1258 369 0 0 0 chr15 88272171 88272212 -15222762 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1258 216 0 0 0 chr15 88272336 88272360 -15222614 + (TTA)n Simple_repeat Simple_repeat 3 26 0 3 1258 22 0 0 0 chr15 88272396 88272418 -15222556 + AT_rich Low_complexity Low_complexity 1 22 0 3 1258 645 274 54 30 chr15 88274869 88275118 -15219856 + RLTR15 LTR ERVK 41 296 -63 3 1258 204 40 0 0 chr15 88275118 88275143 -15219831 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 3 1258 645 274 54 30 chr15 88275143 88275190 -15219784 + RLTR15 LTR ERVK 297 343 -16 3 1258 1180 67 6 11 chr15 88275341 88275522 -15219452 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 3 1258 312 27 0 0 chr15 88275603 88275640 -15219334 + (TTAA)n Simple_repeat Simple_repeat 1 37 0 3 1258 551 81 12 0 chr15 88275681 88275767 -15219207 + (TAGA)n Simple_repeat Simple_repeat 4 90 0 3 1258 631 293 131 29 chr15 88275770 88276149 -15218825 - MLT2B4 LTR ERVL -79 488 1 3 1258 508 263 11 54 chr15 88277042 88277227 -15217747 + HAL1-2a_MD LINE L1 2329 2505 -519 3 1258 1355 191 191 152 chr15 88277235 88277272 -15217702 - MT2A LTR ERVL 0 533 466 3 1258 465 19 0 0 chr15 88277272 88277326 -15217648 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 1258 1355 191 191 152 chr15 88277326 88277801 -15217173 - MT2A LTR ERVL -68 465 1 3 1258 409 287 57 51 chr15 88277806 88277982 -15216992 + HAL1-2a_MD LINE L1 2345 2521 -503 4 1258 529 260 20 119 chr15 88278014 88278215 -15216759 + HAL1-2a_MD LINE L1 2345 2525 -499 4 1258 616 311 32 36 chr15 88278277 88278497 -15216477 - MER20 DNA MER1_type 0 219 1 4 1258 714 183 17 17 chr15 88279707 88279885 -15215089 + CT-rich Low_complexity Low_complexity 3 180 0 4 1258 208 274 0 0 chr15 88280099 88280150 -15214824 + A-rich Low_complexity Low_complexity 1 51 0 4 1258 30 59 0 0 chr15 88280177 88280228 -15214746 + AT_rich Low_complexity Low_complexity 1 51 0 4 1258 630 0 0 0 chr15 88280264 88280334 -15214640 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 4 1258 333 258 18 6 chr15 88281981 88282149 -15212825 + (ATGGTG)n Simple_repeat Simple_repeat 2 171 0 4 1258 198 103 0 0 chr15 88282168 88282197 -15212777 + (ATGGTG)n Simple_repeat Simple_repeat 5 33 0 4 1258 1050 126 157 57 chr15 88282235 88282445 -15212529 + MT2A LTR ERVL 1 231 -302 4 1258 613 65 37 9 chr15 88282460 88282569 -15212405 + (TCTA)n Simple_repeat Simple_repeat 1 112 0 4 1258 490 271 39 59 chr15 88282570 88282723 -15212251 - MT2A LTR ERVL -69 464 315 4 1258 802 139 102 0 chr15 88282726 88282863 -15212111 + MTB_Mm LTR MaLR 256 406 -1 4 1258 1992 148 9 12 chr15 88283800 88284122 -15210852 + ORR1A4 LTR MaLR 1 321 -8 4 1258 274 275 35 115 chr15 88285869 88286035 -15208939 + MLT1A0 LTR MaLR 243 369 -21 4 1258 343 250 0 53 chr15 88287250 88287326 -15207648 + B3A SINE B2 2 73 -125 4 1258 1624 217 104 33 chr15 88287335 88287363 -15207611 + RMER5 LTR ERV1 13 40 -494 4 1258 303 28 0 0 chr15 88287363 88287399 -15207575 + (ATTG)n Simple_repeat Simple_repeat 2 37 0 4 1258 1624 217 104 33 chr15 88287399 88287817 -15207157 + RMER5 LTR ERV1 41 490 -44 4 1258 2292 198 87 8 chr15 88287817 88288312 -15206662 - RMER5 LTR ERV1 0 534 1 4 1258 473 277 73 26 chr15 88288312 88288482 -15206492 + B3 SINE B2 23 204 -12 4 1258 192 152 0 0 chr15 88288503 88288536 -15206438 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 4 1258 264 154 0 0 chr15 88288707 88288759 -15206215 + GA-rich Low_complexity Low_complexity 3 54 0 4 1258 1586 247 58 23 chr15 88288880 88289277 -15205697 - MTD LTR MaLR -8 411 1 4 1258 1641 237 46 93 chr15 88289277 88289894 -15205080 - MTD-int LTR MaLR -95 1163 570 4 1258 374 364 16 45 chr15 88289926 88290168 -15204806 + L1M4 LINE L1 4453 4687 -1459 4 1258 770 201 14 0 chr15 88290203 88290347 -15204627 + ORR1D1 LTR MaLR 11 156 -218 4 1258 420 271 47 70 chr15 88290326 88290497 -15204477 + ID_B1 SINE B4 56 222 -2 4 1258 842 138 0 37 chr15 88290366 88290501 -15204473 + B1_Mur2 SINE Alu 19 148 -1 4 1258 973 239 45 5 chr15 88290529 88290752 -15204222 + ORR1D1 LTR MaLR 143 374 0 4 1258 450 310 98 53 chr15 88290752 88290977 -15203997 + L1M4 LINE L1 4717 4951 -1195 4 1258 403 301 210 23 chr15 88291085 88291347 -15203627 + L1MCa LINE L1 124 434 -6074 4 1258 1453 231 55 53 chr15 88291413 88291774 -15203200 - MTD LTR MaLR -14 405 44 4 1258 860 242 112 83 chr15 88291778 88292256 -15202718 + L1MCa LINE L1 1285 1789 -4719 4 1258 1092 217 5 0 chr15 88292256 88292473 -15202501 + ID_B1 SINE B4 1 218 -6 4 1258 860 242 112 83 chr15 88292473 88292581 -15202393 + L1MCa LINE L1 1790 1888 -4620 4 1258 1252 253 119 57 chr15 88292675 88293061 -15201913 - MTD LTR MaLR -9 410 1 4 1258 417 249 108 128 chr15 88293080 88293191 -15201783 + L1MCa LINE L1 2054 2169 -4339 4 1258 1503 53 37 0 chr15 88293191 88293379 -15201595 + B2_Mm2 SINE B2 1 195 0 4 1258 417 249 108 128 chr15 88293379 88293470 -15201504 + L1MCa LINE L1 2170 2252 -4256 4 1258 900 235 51 80 chr15 88293470 88293961 -15201013 + L1MCa LINE L1 2211 2703 -3618 4 1258 352 292 80 46 chr15 88294010 88294384 -15200590 + L1MCa LINE L1 5217 5606 -1013 4 1258 673 98 9 9 chr15 88294606 88294719 -15200255 + (GGAA)n Simple_repeat Simple_repeat 4 116 0 4 1258 232 342 92 54 chr15 88294830 88295145 -15199829 + L1MCa LINE L1 5669 5995 -420 4 1258 298 347 0 0 chr15 88296387 88296482 -15198492 + (TG)n Simple_repeat Simple_repeat 1 95 0 4 1258 924 108 21 86 chr15 88297142 88297182 -15197792 + RMER17C LTR ERVK 1 40 -370 4 1258 4557 8 0 0 chr15 88297182 88297675 -15197299 + MT2_Mm LTR ERVL 1 493 0 4 1258 924 108 21 86 chr15 88297675 88297828 -15197146 + RMER17C LTR ERVK 41 180 -230 4 1258 702 91 0 0 chr15 88297828 88297927 -15197047 + (TTC)n Simple_repeat Simple_repeat 3 101 0 4 1258 924 189 63 69 chr15 88297927 88298059 -15196915 + RMER17C LTR ERVK 181 410 0 4 1258 270 235 59 0 chr15 88301737 88301805 -15193169 - L1M4 LINE L1 -6373 169 98 4 1258 753 49 0 0 chr15 88301914 88302016 -15192958 + (TC)n Simple_repeat Simple_repeat 1 102 0 4 1258 423 0 0 0 chr15 88303632 88303679 -15191295 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1258 288 0 0 0 chr15 88303877 88303909 -15191065 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1258 432 0 0 0 chr15 88304473 88304521 -15190453 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1258 279 306 217 12 chr15 88304654 88304991 -15189983 + L1MB4 LINE L1 295 700 -5907 4 1258 566 119 86 12 chr15 88305049 88305311 -15189663 + (CACTA)n Simple_repeat Simple_repeat 1 281 0 4 1258 27 0 0 0 chr15 88305380 88305407 -15189567 + AT_rich Low_complexity Low_complexity 1 27 0 4 1258 331 299 47 0 chr15 88305407 88305514 -15189460 - RSINE1 SINE B4 0 165 54 4 1258 435 92 0 0 chr15 88305514 88305579 -15189395 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 1258 405 0 0 0 chr15 88306751 88306796 -15188178 + (TC)n Simple_repeat Simple_repeat 1 45 0 4 1258 303 360 64 41 chr15 88307615 88307786 -15187188 + MER2B DNA MER2_type 156 330 -6 4 1258 772 157 6 140 chr15 88308463 88308634 -15186340 - B1_Mur3 SINE Alu -1 148 1 4 1258 781 69 0 0 chr15 88309660 88309761 -15185213 + B2_Mm2 SINE B2 1 101 -94 4 1258 324 0 0 0 chr15 88309786 88309822 -15185152 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 4 1258 243 0 0 0 chr15 88309848 88309875 -15185099 + (GA)n Simple_repeat Simple_repeat 1 27 0 4 1258 407 338 25 18 chr15 88310265 88310428 -15184546 + MER2 DNA MER2_type 92 255 -90 4 1258 1486 276 70 20 chr15 88310436 88310895 -15184079 + Lx8 LINE L1 6975 7456 -17 4 1258 915 231 11 11 chr15 88310945 88311120 -15183854 + MTD LTR MaLR 1 175 -244 4 1258 787 169 17 18 chr15 88311129 88311300 -15183674 - MTD LTR MaLR -108 311 129 4 1258 534 309 101 72 chr15 88312562 88312938 -15182036 - MLT1B LTR MaLR -1 389 3 4 1258 195 42 0 0 chr15 88313318 88313342 -15181632 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1258 226 379 42 25 chr15 88313855 88313974 -15181000 - MLT1L LTR MaLR -335 275 155 4 1258 534 31 0 0 chr15 88314409 88314473 -15180501 + (TC)n Simple_repeat Simple_repeat 1 64 0 4 1258 3370 40 2 19 chr15 88315147 88315558 -15179416 + MTB_Mm LTR MaLR 4 407 0 4 1258 550 231 17 8 chr15 88315849 88315967 -15179007 + RMER1B Other Other 594 712 -354 4 1258 1182 292 89 79 chr15 88316391 88317090 -15177884 + RMER1C Other Other 11 716 -626 4 1258 850 260 70 59 chr15 88317090 88317376 -15177598 + RLTR20D LTR ERVK 3 291 -277 4 1258 366 280 106 20 chr15 88317350 88317414 -15177560 + RLTR20D LTR ERVK 401 478 -100 4 1258 405 0 0 0 chr15 88317414 88317459 -15177515 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1258 366 292 102 26 chr15 88317459 88317553 -15177421 + RLTR20D LTR ERVK 464 567 -1 4 1258 3151 219 60 58 chr15 88317553 88317972 -15177002 + RMER1C Other Other 560 1000 -342 4 1258 243 0 0 0 chr15 88317972 88317999 -15176975 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1258 3151 219 60 58 chr15 88317999 88318360 -15176614 + RMER1C Other Other 1001 1342 0 4 1258 464 256 0 16 chr15 88318863 88319046 -15175928 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 4 1258 814 105 47 0 chr15 88319796 88319968 -15175006 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1258 231 248 221 41 chr15 88320026 88320148 -15174826 + MLT1A1 LTR MaLR 63 206 -261 4 1258 287 295 13 0 chr15 88320468 88320546 -15174428 + ID4 SINE ID 5 83 0 4 1258 269 315 45 51 chr15 88321537 88321714 -15173260 - L1M5 LINE L1 -2175 3971 3796 4 1258 281 294 29 10 chr15 88321854 88321957 -15173017 - L1MD LINE L1 -2531 3615 3511 4 1258 4706 191 76 21 chr15 88322385 88323406 -15171568 - Lx7 LINE L1 -1 7695 6619 4 1258 8348 162 14 48 chr15 88323451 88324279 -15170695 - L1_Mur3 LINE L1 -1253 4627 3825 4 1258 3243 53 2 8 chr15 88324279 88324677 -15170297 - MTA_Mm LTR MaLR 0 396 1 4 1258 8348 162 14 48 chr15 88324677 88324983 -15169991 - L1_Mur3 LINE L1 -2056 3824 3528 4 1258 3828 27 20 5 chr15 88324983 88325430 -15169544 + L1Md_F3 LINE L1 6130 6583 -1 4 1258 8348 162 14 48 chr15 88325430 88325496 -15169478 - L1_Mur3 LINE L1 -2353 3527 3483 4 1258 198 0 0 0 chr15 88325496 88325518 -15169456 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 4 1258 8348 162 14 48 chr15 88325518 88326021 -15168953 - L1_Mur3 LINE L1 -2398 3482 2980 4 1258 2182 151 43 57 chr15 88326019 88326291 -15168683 - L1_Mur3 LINE L1 -4194 1686 1433 4 1258 290 47 47 0 chr15 88326291 88326334 -15168640 + (GTTTG)n Simple_repeat Simple_repeat 5 49 0 4 1258 2182 168 68 37 chr15 88326334 88326671 -15168303 - L1_Mur3 LINE L1 -4448 1432 1069 4 1258 227 269 65 0 chr15 88326704 88326797 -15168177 - L1M5 LINE L1 -3564 2582 2484 4 1258 339 325 243 0 chr15 88326847 88327012 -15167962 + MLT1A1 LTR MaLR 189 393 -15 4 1258 1682 172 71 18 chr15 88329531 88329869 -15165105 + RLTR15 LTR ERVK 4 359 0 4 1258 306 172 69 0 chr15 88330068 88330126 -15164848 + MTD LTR MaLR 1 62 -317 4 1258 3378 30 2 38 chr15 88330132 88330554 -15164420 + MTB_Mm LTR MaLR 1 407 0 4 1258 1051 223 19 5 chr15 88331084 88331300 -15163674 + ID_B1 SINE B4 6 224 0 4 1258 1551 201 70 17 chr15 88331384 88331739 -15163235 - ORR1D1 LTR MaLR 0 374 1 4 1258 520 293 126 26 chr15 88331939 88332265 -15162709 - MLT1C LTR MaLR -79 388 18 4 1258 469 268 105 30 chr15 88332910 88333204 -15161770 + MLT2B4 LTR ERVL 15 338 -59 4 1258 1314 236 119 35 chr15 88333512 88333881 -15161093 + MTD LTR MaLR 19 418 -1 4 1258 556 162 70 90 chr15 88334056 88334190 -15160784 - Lx4A LINE L1 0 7058 6928 4 1258 306 0 0 0 chr15 88334190 88334224 -15160750 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1258 556 162 70 90 chr15 88334224 88334245 -15160729 - Lx4A LINE L1 -131 6927 6907 4 1258 270 283 0 52 chr15 88336801 88336898 -15158076 + B1F SINE Alu 37 128 -21 4 1258 2025 120 12 138 chr15 88336933 88337338 -15157636 + ORR1B1 LTR MaLR 41 394 0 4 1258 318 20 0 56 chr15 88337398 88337452 -15157522 + (CATA)n Simple_repeat Simple_repeat 2 52 0 4 1258 1660 285 60 19 chr15 88337777 88338310 -15156664 + Lx5 LINE L1 6478 7032 -18 4 1258 226 178 0 22 chr15 88338658 88338704 -15156270 - ID4 SINE ID -38 45 1 4 1258 279 0 0 0 chr15 88339889 88339920 -15155054 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1258 385 310 6 101 chr15 88340030 88340188 -15154786 - RSINE1 SINE B4 -22 143 1 4 1258 1404 84 5 10 chr15 88341125 88341318 -15153656 + B2_Mm1t SINE B2 2 193 0 4 1258 333 234 91 86 chr15 88341651 88341838 -15153136 + Lx8 LINE L1 6994 7181 -292 4 1258 1007 252 101 22 chr15 88341969 88342237 -15152737 - MTD LTR MaLR -14 405 117 4 1259 1203 215 58 83 chr15 88343152 88343449 -15151525 - RMER4B LTR ERVK -9 576 256 4 1259 228 111 0 0 chr15 88343449 88343485 -15151489 + (CAG)n Simple_repeat Simple_repeat 2 37 0 5 1259 1203 227 81 72 chr15 88343485 88343716 -15151258 - RMER4B LTR ERVK -330 255 18 4 1259 2061 254 32 16 chr15 88344224 88344792 -15150182 - Lx8 LINE L1 -416 7057 6481 5 1259 285 266 16 0 chr15 88344792 88344856 -15150118 + MTEa LTR MaLR 238 302 -77 5 1259 232 282 0 7 chr15 88344871 88344939 -15150035 - B4A SINE B4 -219 73 8 5 1259 475 261 43 94 chr15 88345245 88345316 -15149658 + ID_B1 SINE B4 40 211 -13 5 1259 762 183 0 8 chr15 88345316 88345437 -15149537 + B1_Mur2 SINE Alu 17 136 -13 5 1259 2579 144 10 20 chr15 88345437 88345835 -15149139 - ORR1B1 LTR MaLR 0 394 1 5 1259 475 254 32 90 chr15 88345835 88345852 -15149122 + ID_B1 SINE B4 212 223 -1 5 1259 678 244 156 10 chr15 88346387 88346586 -15148388 + B4A SINE B4 3 230 -62 5 1259 180 0 0 0 chr15 88346739 88346759 -15148215 + (CAGA)n Simple_repeat Simple_repeat 2 21 0 5 1259 443 298 112 53 chr15 88347435 88347641 -15147333 + ID_B1 SINE B4 5 222 -2 5 1259 436 218 150 118 chr15 88347880 88348067 -15146907 + B2_Mm2 SINE B2 1 193 -2 5 1259 261 0 0 0 chr15 88349939 88349968 -15145006 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 5 1259 462 294 0 48 chr15 88351835 88352021 -15142953 + (CATA)n Simple_repeat Simple_repeat 4 180 0 5 1259 2560 42 42 15 chr15 88353078 88353413 -15141561 + MTB LTR MaLR 1 344 -56 5 1259 961 47 0 8 chr15 88353406 88353534 -15141440 - B1_Mus1 SINE Alu -21 127 1 5 1259 358 65 0 0 chr15 88353534 88353578 -15141396 + MTB LTR MaLR 364 407 0 5 1259 892 119 271 0 chr15 88353866 88354043 -15140931 + URR1B DNA MER1_type 1 225 0 5 1259 717 101 0 63 chr15 88354279 88354470 -15140504 + GA-rich Low_complexity Low_complexity 1 179 0 5 1259 1443 235 97 6 chr15 88354924 88355275 -15139699 + MTD LTR MaLR 22 404 -15 5 1259 180 0 0 0 chr15 88355603 88355623 -15139351 + (TA)n Simple_repeat Simple_repeat 1 20 0 5 1259 989 239 40 9 chr15 88355626 88355850 -15139124 - Lx5 LINE L1 -20 7030 6800 5 1259 1164 111 0 0 chr15 88355857 88355917 -15139057 + (GGA)n Simple_repeat Simple_repeat 1 60 0 5 1259 1229 89 0 11 chr15 88355917 88356099 -15138875 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 1259 1164 111 0 0 chr15 88356099 88356200 -15138774 + (GGA)n Simple_repeat Simple_repeat 1 101 0 5 1259 1124 117 0 11 chr15 88356200 88356382 -15138592 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 1259 1164 36 0 0 chr15 88356382 88356435 -15138539 + (GGA)n Simple_repeat Simple_repeat 1 53 0 5 1259 30 0 0 0 chr15 88356479 88356509 -15138465 + AT_rich Low_complexity Low_complexity 1 30 0 5 1259 238 323 0 0 chr15 88356694 88356756 -15138218 + (CA)n Simple_repeat Simple_repeat 2 63 0 5 1259 495 127 0 14 chr15 88357539 88357611 -15137363 + ORR1B2 LTR MaLR 2 72 -295 5 1259 7988 129 7 25 chr15 88357614 88358360 -15136614 - L1_Mur2 LINE L1 -47 5830 5108 5 1259 1189 119 32 5 chr15 88358360 88358385 -15136589 - B2_Mm1a SINE B2 -3 190 164 5 1259 203 61 30 0 chr15 88358385 88358418 -15136556 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 5 1259 1189 119 32 5 chr15 88358418 88358577 -15136397 - B2_Mm1a SINE B2 -30 163 1 5 1259 7988 129 7 25 chr15 88358577 88359172 -15135802 - L1_Mur2 LINE L1 -770 5107 4514 5 1259 4352 185 148 5 chr15 88359172 88360201 -15134773 + Lx4B LINE L1 5862 7037 -21 5 1259 180 0 0 0 chr15 88360201 88360221 -15134753 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 5 1259 889 148 7 21 chr15 88360229 88360374 -15134600 + ORR1B2 LTR MaLR 55 197 -170 5 1259 1369 260 48 3 chr15 88360376 88360685 -15134289 + MTE2b LTR MaLR 19 341 -38 5 1259 3085 297 94 35 chr15 88360709 88361996 -15132978 + MTE-int LTR MaLR 3 1484 -96 5 1259 201 133 0 0 chr15 88363072 88363102 -15131872 + (TTC)n Simple_repeat Simple_repeat 1 30 0 5 1259 180 0 0 0 chr15 88363811 88363831 -15131143 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1259 493 323 47 0 chr15 88363994 88364251 -15130723 - L1MA7 LINE L1 -264 6027 5759 5 1259 453 36 0 0 chr15 88364397 88364452 -15130522 + (CATA)n Simple_repeat Simple_repeat 4 58 0 5 1259 842 302 94 21 chr15 88368686 88369017 -15125957 + MER54A LTR ERVL 2 356 -545 5 1259 398 232 49 0 chr15 88369012 88369094 -15125880 + PB1D10 SINE Alu 31 116 -1 5 1259 628 236 148 27 chr15 88369108 88369291 -15125683 + ID_B1 SINE B4 20 224 0 5 1259 241 247 92 169 chr15 88369885 88370163 -15124811 - ORR1C2 LTR MaLR -103 281 21 5 1259 409 271 6 33 chr15 88370402 88370585 -15124389 + (TCCA)n Simple_repeat Simple_repeat 2 179 0 5 1259 377 261 6 48 chr15 88370542 88370707 -15124267 + (CCCA)n Simple_repeat Simple_repeat 2 159 0 5 1259 436 275 17 17 chr15 88370631 88370923 -15124051 + (TCCA)n Simple_repeat Simple_repeat 1 292 0 5 1259 3268 36 39 0 chr15 88372176 88372561 -15122413 + MTB LTR MaLR 1 400 0 5 1259 297 247 49 0 chr15 88372689 88372770 -15122204 + PB1 SINE Alu 41 125 -2 5 1259 201 108 0 0 chr15 88372770 88372807 -15122167 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 5 1259 357 279 58 0 chr15 88372820 88372906 -15122068 - PB1D7 SINE Alu -29 91 1 5 1259 261 0 0 0 chr15 88373013 88373042 -15121932 + (TGGA)n Simple_repeat Simple_repeat 4 32 0 5 1259 498 265 36 41 chr15 88373615 88373835 -15121139 + L1MB3 LINE L1 4981 5199 -947 5 1259 465 276 108 23 chr15 88373944 88374139 -15120835 + MLT1A LTR MaLR 37 250 -140 5 1259 2128 90 21 58 chr15 88374275 88374605 -15120369 - ORR1A3 LTR MaLR -8 318 1 5 1259 715 257 92 36 chr15 88374616 88374919 -15120055 + L1MB3 LINE L1 5345 5664 -519 5 1259 360 304 33 0 chr15 88375014 88375106 -15119868 + B4A SINE B4 1 95 -197 5 1259 342 277 57 0 chr15 88375146 88375287 -15119687 + L1MB3 LINE L1 6020 6168 -15 5 1259 210 85 19 96 chr15 88375365 88375391 -15119583 + (GTTTG)n Simple_repeat Simple_repeat 5 28 0 5 1259 1103 140 51 0 chr15 88375391 88375569 -15119405 - B2_Mm2 SINE B2 -7 188 2 5 1259 210 85 19 96 chr15 88375569 88375594 -15119380 + (GTTTG)n Simple_repeat Simple_repeat 1 24 0 5 1259 2588 161 34 7 chr15 88375984 88376423 -15118551 + RMER4A LTR ERVK 1 451 -15 5 1259 1352 150 28 79 chr15 88376462 88376715 -15118259 - ORR1D1 LTR MaLR -132 242 3 5 1259 440 165 109 40 chr15 88376708 88376740 -15118234 + MTE2a LTR MaLR 272 303 -76 5 1259 216 0 0 0 chr15 88376740 88376764 -15118210 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 5 1259 440 165 109 40 chr15 88376764 88376832 -15118142 + MTE2a LTR MaLR 304 379 0 5 1259 189 171 0 0 chr15 88377983 88378018 -15116956 + C-rich Low_complexity Low_complexity 4 38 0 5 1259 195 273 25 38 chr15 88378907 88378987 -15115987 - MIR SINE MIR -115 147 69 5 1259 4183 94 5 11 chr15 88378997 88379567 -15115407 + RMER2 LTR ERV1 1 567 0 5 1259 1317 48 36 0 chr15 88379717 88379884 -15115090 + B2_Mm2 SINE B2 13 185 -10 5 1259 314 0 0 47 chr15 88381267 88381310 -15113664 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 5 1259 337 211 165 11 chr15 88381312 88381403 -15113571 - PB1D10 SINE Alu -12 105 1 5 1259 331 340 0 11 chr15 88381461 88381556 -15113418 + C-rich Low_complexity Low_complexity 2 95 0 5 1259 509 175 89 184 chr15 88381556 88381670 -15113304 + ORR1D2 LTR MaLR 169 276 -94 5 1259 1530 44 38 0 chr15 88381670 88381853 -15113121 - B2_Mm2 SINE B2 -4 191 2 5 1259 509 175 89 184 chr15 88381853 88381906 -15113068 + ORR1D2 LTR MaLR 277 320 -50 5 1259 715 163 0 13 chr15 88381907 88382056 -15112918 + GA-rich Low_complexity Low_complexity 3 149 0 5 1259 328 341 24 0 chr15 88383072 88383198 -15111776 + (TGGA)n Simple_repeat Simple_repeat 3 131 0 5 1259 243 348 71 0 chr15 88384753 88384865 -15110109 + B1_Mus1 SINE Alu 3 122 -26 5 1259 528 262 0 0 chr15 88384765 88384872 -15110102 + ID_B1 SINE B4 102 208 -16 5 1259 338 94 16 0 chr15 88384894 88384958 -15110016 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1259 308 94 19 0 chr15 88385827 88385880 -15109094 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 1259 276 282 80 94 chr15 88387745 88388097 -15106877 + RMER10A LTR ERVL 29 375 -67 5 1259 228 297 79 42 chr15 88388121 88388311 -15106663 + RMER10A LTR ERVL 216 412 -30 5 1259 2196 142 66 14 chr15 88388650 88389014 -15105960 - ORR1C2 LTR MaLR -1 383 1 5 1259 2429 69 12 51 chr15 88389083 88389419 -15105555 - ORR1A2 LTR MaLR 0 327 5 5 1259 386 297 135 17 chr15 88389442 88389620 -15105354 + RMER15 LTR ERVL 372 570 -5 5 1259 319 310 74 26 chr15 88393301 88393490 -15101484 + L1MEf LINE L1 1332 1529 -5805 5 1259 368 359 83 63 chr15 88393540 88393728 -15101246 + L1MEf LINE L1 1737 1928 -5174 5 1259 1137 128 0 0 chr15 88393728 88393908 -15101066 + (TAG)n Simple_repeat Simple_repeat 1 180 0 5 1259 368 359 83 63 chr15 88393908 88394198 -15100776 + L1MEf LINE L1 1929 2225 -4877 5 1259 1308 257 27 27 chr15 88394462 88394812 -15100162 + ORR1D2 LTR MaLR 6 350 -9 5 1259 933 164 151 20 chr15 88394865 88395064 -15099910 + URR1B DNA MER1_type 1 225 0 5 1259 470 96 14 0 chr15 88395316 88395389 -15099585 + (GGA)n Simple_repeat Simple_repeat 1 74 0 5 1259 216 0 0 0 chr15 88395387 88395411 -15099563 + (TGG)n Simple_repeat Simple_repeat 2 25 0 5 1259 376 250 109 68 chr15 88396195 88396395 -15098579 - MLT1C LTR MaLR -269 236 18 5 1259 3163 58 28 13 chr15 88398047 88398490 -15096484 + RLTR10C LTR ERVK 1 418 -18 5 1259 1455 261 61 9 chr15 88400061 88400487 -15094487 + Lx8 LINE L1 6749 7196 -277 5 1259 1146 214 170 54 chr15 88402122 88402457 -15092517 - MTE2a LTR MaLR -1 378 5 5 1259 423 327 32 19 chr15 88402479 88402635 -15092339 - MTD LTR MaLR -261 158 1 5 1259 2516 101 0 0 chr15 88403211 88403538 -15091436 + ORR1A2 LTR MaLR 1 327 0 5 1259 2854 71 0 0 chr15 88404281 88404633 -15090341 + L1_Mus1 LINE L1 6213 6564 -3 5 1259 198 0 0 0 chr15 88404633 88404655 -15090319 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 5 1259 25 0 0 0 chr15 88404656 88404681 -15090293 + AT_rich Low_complexity Low_complexity 1 25 0 5 1259 292 238 25 38 chr15 88406255 88406412 -15088562 + (TGGA)n Simple_repeat Simple_repeat 2 156 0 5 1259 215 261 31 38 chr15 88406795 88406954 -15088020 + (TGGA)n Simple_repeat Simple_repeat 2 159 0 5 1259 926 177 9 20 chr15 88407948 88408287 -15086687 + GA-rich Low_complexity Low_complexity 1 335 0 5 1259 343 239 153 19 chr15 88408393 88408602 -15086372 + L1M5 LINE L1 4160 4396 -1750 6 1259 301 359 170 29 chr15 88409160 88409502 -15085472 + L1M5 LINE L1 4971 5360 -786 6 1259 2335 72 6 62 chr15 88409523 88409861 -15085113 + ORR1A2 LTR MaLR 1 319 -8 6 1259 481 158 10 10 chr15 88411432 88411534 -15083440 + (TG)n Simple_repeat Simple_repeat 2 103 0 6 1259 386 226 17 13 chr15 88411623 88411929 -15083045 + (TG)n Simple_repeat Simple_repeat 1 307 0 6 1259 508 209 17 11 chr15 88411941 88412120 -15082854 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 1259 992 238 65 76 chr15 88412120 88412411 -15082563 - B4 SINE B4 0 292 5 6 1259 1066 201 69 0 chr15 88412918 88413122 -15081852 + ID_B1 SINE B4 2 219 -5 6 1259 317 267 119 42 chr15 88413200 88413368 -15081606 + ORR1D2 LTR MaLR 3 183 -187 6 1259 1098 153 20 26 chr15 88413507 88413702 -15081272 + ORR1C2 LTR MaLR 1 194 -190 6 1259 509 158 10 0 chr15 88413704 88413805 -15081169 + CT-rich Low_complexity Low_complexity 1 102 0 6 1259 293 140 0 17 chr15 88413822 88413880 -15081094 + (TCTA)n Simple_repeat Simple_repeat 3 59 0 6 1259 1046 166 28 6 chr15 88413884 88414060 -15080914 + ORR1C2 LTR MaLR 192 371 -13 6 1259 877 296 4 17 chr15 88414726 88414947 -15080027 + B4A SINE B4 15 232 -60 6 1259 516 236 153 8 chr15 88414947 88415071 -15079903 + B3A SINE B2 2 143 -55 6 1259 336 48 0 0 chr15 88415075 88415117 -15079857 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 1259 235 253 24 118 chr15 88415143 88415228 -15079746 + B4A SINE B4 216 292 0 6 1259 414 270 0 0 chr15 88415232 88415410 -15079564 + (CATA)n Simple_repeat Simple_repeat 1 178 0 6 1259 1230 34 0 7 chr15 88415810 88415957 -15079017 + B1_Mm SINE Alu 2 147 0 6 1259 207 278 0 40 chr15 88416132 88416207 -15078767 + (TG)n Simple_repeat Simple_repeat 1 72 0 6 1259 465 19 0 0 chr15 88416353 88416407 -15078567 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1259 369 0 0 0 chr15 88417425 88417466 -15077508 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1259 326 237 0 0 chr15 88417469 88417528 -15077446 - RSINE1 SINE B4 -28 137 79 6 1259 1299 77 44 0 chr15 88418142 88418323 -15076651 - B2_Mm2 SINE B2 -5 190 2 6 1259 863 296 105 20 chr15 88418769 88419111 -15075863 + RMER5 LTR ERV1 80 450 -84 6 1259 3301 52 3 0 chr15 88419521 88419905 -15075069 + IAPEY_LTR LTR ERVK 1 385 0 6 1259 2966 150 10 19 chr15 88419905 88420582 -15074392 + IAPEy-int LTR ERVK 1 1058 -6455 6 1259 21237 43 8 4 chr15 88420582 88423280 -15071694 + IAPEy-int LTR ERVK 4804 7511 -2 6 1259 3290 55 3 0 chr15 88423282 88423666 -15071308 + IAPEY_LTR LTR ERVK 1 385 0 6 1259 6603 37 1 1 chr15 88424037 88424857 -15070117 - L1Md_F2 LINE L1 -221 5662 4843 6 1259 7860 28 3 8 chr15 88424857 88425786 -15069188 + L1Md_F2 LINE L1 5655 6579 -3 6 1259 297 269 21 21 chr15 88425814 88425909 -15069065 + ID_B1 SINE B4 81 175 -49 6 1259 487 238 48 0 chr15 88425827 88425932 -15069042 + PB1D9 SINE Alu 11 120 0 6 1259 597 214 0 23 chr15 88425965 88426142 -15068832 + G-rich Low_complexity Low_complexity 4 176 0 6 1259 297 253 61 78 chr15 88426447 88426667 -15068307 - RMER10B LTR ERVL -135 307 76 6 1259 254 214 117 48 chr15 88427152 88427182 -15067792 + MT2A LTR ERVL 4 111 -420 6 1259 340 155 183 0 chr15 88427182 88427253 -15067721 + MTD LTR MaLR 58 141 -278 6 1259 2435 124 83 20 chr15 88427255 88427651 -15067323 + MTC LTR MaLR 1 421 0 6 1259 599 211 96 64 chr15 88427654 88427841 -15067133 + MTD LTR MaLR 187 379 -40 6 1259 338 264 124 139 chr15 88427806 88428000 -15066974 - RLTR24 LTR ERV1 -18 511 321 6 1259 325 222 54 32 chr15 88428158 88428251 -15066723 - RLTR24 LTR ERV1 -434 95 1 6 1259 331 167 185 22 chr15 88428251 88428322 -15066652 + MTD LTR MaLR 333 418 -1 6 1259 432 117 0 0 chr15 88429633 88429710 -15065264 + (CA)n Simple_repeat Simple_repeat 1 77 0 6 1259 224 226 202 11 chr15 88430437 88430531 -15064443 + MIR SINE MIR 20 131 -131 6 1259 492 32 0 0 chr15 88432129 88432191 -15062783 + (TC)n Simple_repeat Simple_repeat 1 62 0 6 1259 180 0 0 0 chr15 88432256 88432276 -15062698 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 6 1259 308 333 56 0 chr15 88432343 88432433 -15062541 - RSINE1 SINE B4 -67 98 4 6 1259 2944 99 5 15 chr15 88432672 88433080 -15061894 - MTB_Mm LTR MaLR 0 407 4 6 1259 431 316 161 15 chr15 88433283 88433363 -15061611 - L1MD2 LINE L1 -398 5961 5876 6 1259 233 29 29 0 chr15 88433363 88433397 -15061577 + (TTA)n Simple_repeat Simple_repeat 2 36 0 6 1259 431 316 161 15 chr15 88433397 88433837 -15061137 - L1MD2 LINE L1 -484 5875 5366 6 1259 246 220 0 0 chr15 88434250 88434300 -15060674 + L1MC1 LINE L1 6271 6320 -13 6 1259 198 0 0 0 chr15 88434590 88434612 -15060362 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 1259 198 103 0 0 chr15 88434623 88434652 -15060322 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 6 1259 568 223 254 18 chr15 88434655 88434824 -15060150 + B3 SINE B2 1 209 -7 6 1259 560 189 92 30 chr15 88434869 88435000 -15059974 + B1_Mur2 SINE Alu 1 139 -10 6 1259 180 111 0 0 chr15 88435001 88435028 -15059946 + (TAA)n Simple_repeat Simple_repeat 3 29 0 6 1259 748 216 364 4 chr15 88435908 88436175 -15058799 - ORR1D2 LTR MaLR -5 365 3 6 1259 454 337 78 0 chr15 88436408 88436663 -15058311 + L1MA7 LINE L1 5997 6271 -20 6 1259 912 232 29 10 chr15 88436841 88437046 -15057928 - B3 SINE B2 -6 210 2 6 1259 638 193 6 0 chr15 88437330 88437501 -15057473 + (TG)n Simple_repeat Simple_repeat 1 172 0 6 1259 635 276 131 40 chr15 88437557 88437878 -15057096 + ORR1E LTR MaLR 10 359 0 6 1259 304 275 78 32 chr15 88437920 88438017 -15056957 - L1MD LINE L1 -2474 3672 3567 6 1259 240 35 0 0 chr15 88438017 88438046 -15056928 + (ATG)n Simple_repeat Simple_repeat 1 29 0 6 1259 304 275 78 32 chr15 88438046 88438102 -15056872 - L1MD LINE L1 -2580 3566 3513 6 1259 384 40 0 0 chr15 88438179 88438229 -15056745 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1259 530 267 16 16 chr15 88438237 88438359 -15056615 - B4A SINE B4 -167 125 4 6 1259 266 330 51 6 chr15 88438474 88438651 -15056323 - L1M5 LINE L1 -2829 3317 3133 6 1259 189 195 0 0 chr15 88438689 88438730 -15056244 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1259 998 298 10 24 chr15 88438756 88439048 -15055926 - B4A SINE B4 0 292 5 6 1259 705 251 62 33 chr15 88439071 88439281 -15055693 - B3A SINE B2 0 216 1 6 1259 441 296 64 24 chr15 88439360 88439609 -15055365 - L1MD LINE L1 -3199 2947 2689 6 1259 353 332 134 11 chr15 88439749 88440026 -15054948 - L1M4 LINE L1 -3653 2493 2183 6 1259 579 297 119 48 chr15 88440089 88440358 -15054616 - B4A SINE B4 -2 290 3 6 1259 234 291 93 93 chr15 88440891 88441031 -15053943 + YREP_Mm Unknown Unknown 156 295 -1517 6 1259 754 197 8 8 chr15 88440907 88441040 -15053934 - B1_Mur1 SINE Alu -4 145 13 6 1259 303 245 99 18 chr15 88441132 88441253 -15053721 - L1M4 LINE L1 -342 5838 5710 6 1259 314 179 38 114 chr15 88442369 88442527 -15052447 - HAL1-2a_MD LINE L1 -517 2507 2362 6 1259 295 108 21 79 chr15 88442531 88442671 -15052303 + (TG)n Simple_repeat Simple_repeat 1 132 0 6 1259 1612 107 28 16 chr15 88442678 88442925 -15052049 + RMER4B LTR ERVK 1 250 -335 6 1259 534 16 0 0 chr15 88443249 88443312 -15051662 + (GA)n Simple_repeat Simple_repeat 2 64 0 6 1259 388 216 111 22 chr15 88444789 88444879 -15050095 + PB1D10 SINE Alu 1 98 -19 6 1259 443 300 18 6 chr15 88445143 88445314 -15049660 + L1M5 LINE L1 5169 5341 -805 6 1259 413 187 25 116 chr15 88445727 88445848 -15049126 + MT2B LTR ERVL 147 256 -345 6 1259 423 261 84 28 chr15 88445755 88445853 -15049121 + B4 SINE B4 94 202 -90 6 1259 243 0 0 0 chr15 88445853 88445880 -15049094 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1259 534 143 17 118 chr15 88445880 88445900 -15049074 + PB1D7 SINE Alu 99 115 -5 6 1259 423 261 84 28 chr15 88445900 88445923 -15049051 + B4 SINE B4 203 243 -49 6 1259 1207 87 127 0 chr15 88445958 88446131 -15048843 + B2_Mm2 SINE B2 1 195 0 6 1259 211 225 49 12 chr15 88446286 88446367 -15048607 + (TTGG)n Simple_repeat Simple_repeat 4 87 0 6 1259 838 116 10 0 chr15 88446369 88446494 -15048480 - B1_Mus1 SINE Alu -4 144 18 6 1259 467 214 61 0 chr15 88446747 88446845 -15048129 + MTEa LTR MaLR 1 104 -275 6 1259 591 304 39 29 chr15 88446833 88447040 -15047934 - B4 SINE B4 -83 209 1 6 1259 224 200 15 0 chr15 88447202 88447267 -15047707 + (TCTG)n Simple_repeat Simple_repeat 4 69 0 6 1259 210 71 0 0 chr15 88448682 88448710 -15046264 + (CCCCCA)n Simple_repeat Simple_repeat 3 30 0 6 1259 3055 42 46 16 chr15 88450098 88450486 -15044488 + MTB LTR MaLR 1 400 0 6 1259 287 293 108 45 chr15 88450538 88450695 -15044279 - ORR1E LTR MaLR -120 239 73 6 1259 2810 58 0 0 chr15 88451030 88451377 -15043597 + L1Md_A LINE L1 6236 6582 0 6 1259 908 73 76 55 chr15 88451391 88451536 -15043438 + B2_Mm1t SINE B2 2 149 -44 6 1259 431 109 319 26 chr15 88451535 88451648 -15043326 + B2_Mm2 SINE B2 49 194 -1 6 1259 188 34 0 33 chr15 88451827 88451857 -15043117 + (CAAAAA)n Simple_repeat Simple_repeat 1 29 0 6 1259 222 224 40 95 chr15 88453634 88453708 -15041266 + ID4_ SINE ID 14 83 0 6 1259 318 106 0 0 chr15 88453851 88453898 -15041076 + (TTTC)n Simple_repeat Simple_repeat 3 49 0 6 1259 1194 48 0 14 chr15 88453914 88454061 -15040913 - B1_Mm SINE Alu -2 145 1 6 1259 928 176 0 0 chr15 88454133 88454281 -15040693 + B1_Mur2 SINE Alu 2 149 0 6 1259 234 0 0 0 chr15 88454281 88454307 -15040667 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1259 1801 173 16 10 chr15 88454307 88454610 -15040364 + Lx4A LINE L1 6747 7051 -7 6 1259 2632 139 15 83 chr15 88455260 88455739 -15039235 + RLTR41 LTR ERV1 1 446 0 6 1259 716 252 106 55 chr15 88457014 88457287 -15037687 + B4A SINE B4 3 289 -3 6 1259 2088 152 8 74 chr15 88457393 88457783 -15037191 - ORR1B1 LTR MaLR 0 394 31 6 1259 184 111 22 22 chr15 88458205 88458251 -15036723 + T-rich Low_complexity Low_complexity 3 48 0 6 1259 243 267 92 13 chr15 88458252 88458328 -15036646 - ID4_ SINE ID 0 83 2 6 1259 440 237 44 0 chr15 88458341 88458455 -15036519 - PB1 SINE Alu -8 119 1 6 1259 388 279 89 117 chr15 88458529 88458878 -15036096 + MTEa LTR MaLR 1 379 0 6 1259 378 248 94 34 chr15 88460633 88460750 -15034224 + B4 SINE B4 23 146 -146 7 1259 222 191 0 0 chr15 88460859 88460906 -15034068 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 7 1259 855 215 0 0 chr15 88461300 88461449 -15033525 + B1_Mur1 SINE Alu 1 149 0 7 1259 1256 47 0 7 chr15 88461454 88461603 -15033371 + B1_Mus1 SINE Alu 1 148 0 7 1259 225 0 0 0 chr15 88461608 88461633 -15033341 + (TAA)n Simple_repeat Simple_repeat 2 26 0 7 1259 932 67 5 77 chr15 88461650 88461844 -15033130 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 7 1259 221 178 22 0 chr15 88461911 88461956 -15033018 + B4 SINE B4 2 47 -245 7 1259 254 27 81 0 chr15 88462001 88462038 -15032936 + B3A SINE B2 1 40 -158 7 1259 231 61 0 0 chr15 88462067 88462100 -15032874 + (TTAA)n Simple_repeat Simple_repeat 1 33 0 7 1259 1915 219 133 17 chr15 88462142 88462616 -15032358 - RMER5 LTR ERV1 -5 529 1 7 1259 875 160 0 20 chr15 88462661 88462808 -15032166 + B1_Mur4 SINE Alu 1 144 -6 7 1259 539 347 24 24 chr15 88462954 88463205 -15031769 + MER2 DNA MER2_type 83 333 -12 7 1259 325 258 0 0 chr15 88463287 88463349 -15031625 + B1F SINE Alu 48 109 -40 7 1259 598 321 95 25 chr15 88463381 88463688 -15031286 + L1MD LINE L1 3132 3466 -2680 7 1259 933 113 0 0 chr15 88463688 88463838 -15031136 + (TG)n Simple_repeat Simple_repeat 1 150 0 7 1259 598 321 95 25 chr15 88463838 88464264 -15030710 + L1MD LINE L1 3467 3916 -2230 7 1259 986 92 8 0 chr15 88464397 88464528 -15030446 + B1_Mus1 SINE Alu 1 132 -16 7 1259 186 189 0 0 chr15 88464533 88464570 -15030404 + GA-rich Low_complexity Low_complexity 1 37 0 7 1259 241 246 0 17 chr15 88464583 88464641 -15030333 + GA-rich Low_complexity Low_complexity 2 58 0 7 1259 261 0 0 0 chr15 88464641 88464670 -15030304 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 7 1259 268 327 9 9 chr15 88464817 88464995 -15029979 + (CATATA)n Simple_repeat Simple_repeat 1 178 0 7 1259 22 0 0 0 chr15 88465636 88465658 -15029316 + AT_rich Low_complexity Low_complexity 1 22 0 7 1259 243 125 0 0 chr15 88465878 88465918 -15029056 + (TCCCC)n Simple_repeat Simple_repeat 4 43 0 7 1259 1353 224 115 65 chr15 88467537 88467919 -15027055 - MTD LTR MaLR 0 419 19 7 1259 210 171 0 0 chr15 88467920 88467961 -15027013 + (TAA)n Simple_repeat Simple_repeat 2 42 0 7 1259 260 259 35 47 chr15 88468377 88468462 -15026512 - MLT2B4 LTR ERVL -469 87 4 7 1259 750 329 100 11 chr15 88469159 88469528 -15025446 + Charlie1a DNA MER1_type 461 862 -593 7 1259 228 186 0 0 chr15 88470011 88470070 -15024904 + CT-rich Low_complexity Low_complexity 3 61 0 7 1259 351 44 0 0 chr15 88470072 88470117 -15024857 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 7 1259 741 164 35 14 chr15 88470117 88470259 -15024715 - B1_Mus1 SINE Alu -1 147 3 7 1259 1067 261 86 39 chr15 88470393 88470856 -15024118 + L1M2 LINE L1 3716 4196 -1950 7 1259 254 139 0 0 chr15 88470856 88470892 -15024082 + (GA)n Simple_repeat Simple_repeat 1 36 0 7 1259 1190 96 0 11 chr15 88470892 88471004 -15023970 + (GGAA)n Simple_repeat Simple_repeat 3 114 0 7 1259 1362 97 0 62 chr15 88471004 88471212 -15023762 + B2_Mm2 SINE B2 1 195 0 7 1259 1190 96 0 11 chr15 88471212 88471279 -15023695 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 7 1259 243 267 40 0 chr15 88471307 88471382 -15023592 + L1M2 LINE L1 4162 4239 -1904 7 1259 1054 206 9 46 chr15 88471396 88471615 -15023359 + B3 SINE B2 6 216 0 7 1259 764 246 138 7 chr15 88471663 88471953 -15023021 + L1_Mur3 LINE L1 4248 4575 -1305 7 1259 561 96 0 0 chr15 88471961 88472034 -15022940 + tRNA-Met tRNA tRNA 1 73 -3 7 1259 2236 101 129 11 chr15 88472065 88472771 -15022203 + Lx3C LINE L1 6174 6963 -10 7 1259 219 36 0 0 chr15 88472771 88472799 -15022175 + (TAA)n Simple_repeat Simple_repeat 3 30 0 7 1259 498 249 112 84 chr15 88472807 88473057 -15021917 + L1M2 LINE L1 4597 4853 -1290 7 1259 340 200 17 0 chr15 88473074 88473134 -15021840 - B4A SINE B4 -223 69 9 7 1259 349 282 0 101 chr15 88473134 88473389 -15021585 + L1M2 LINE L1 4867 5084 -1059 7 1259 301 250 63 41 chr15 88473428 88473592 -15021382 + L1M2 LINE L1 5438 5613 -543 7 157 238 273 36 0 chr15 88473592 88473647 -15021327 + RSINE1 SINE B4 12 68 -97 7 1260 363 257 70 57 chr15 88473817 88473974 -15021000 - RMER17C LTR ERVK -68 342 184 7 1260 752 261 11 6 chr15 88474555 88474736 -15020238 + B3A SINE B2 2 183 -15 7 1260 308 296 27 82 chr15 88475038 88475185 -15019789 - HAL1b LINE L1 -7 2002 1864 7 1260 651 256 8 23 chr15 88475262 88475394 -15019580 + ID_B1 SINE B4 83 212 -12 7 1260 294 29 0 0 chr15 88475397 88475432 -15019542 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1260 506 259 180 6 chr15 88475478 88475632 -15019342 + B3A SINE B2 1 183 -15 7 1260 357 24 0 0 chr15 88475632 88475674 -15019300 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 1260 506 259 180 6 chr15 88475674 88475686 -15019288 + B3A SINE B2 184 195 -3 7 1260 847 232 124 21 chr15 88475918 88476160 -15018814 + B4 SINE B4 2 268 -24 7 1260 288 53 0 0 chr15 88476165 88476203 -15018771 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1260 432 0 0 0 chr15 88476203 88476250 -15018724 + (GA)n Simple_repeat Simple_repeat 2 49 0 7 1260 1999 131 9 100 chr15 88476422 88476873 -15018101 + RMER17C LTR ERVK 1 410 0 7 1260 329 314 22 50 chr15 88477076 88477257 -15017717 - L1MB3 LINE L1 -211 5972 5797 7 1260 762 308 87 13 chr15 88477507 88478107 -15016867 - L1MB3 LINE L1 -750 5430 4782 7 1260 273 250 118 52 chr15 88478293 88478428 -15016546 - ORR1E LTR MaLR -162 197 54 7 1260 28 29 0 0 chr15 88478615 88478650 -15016324 + AT_rich Low_complexity Low_complexity 1 35 0 7 1260 234 0 0 0 chr15 88478780 88478806 -15016168 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 1260 471 235 53 83 chr15 88478852 88478891 -15016083 - L1MB3 LINE L1 -1658 4482 4443 7 1260 1354 99 5 0 chr15 88478891 88479082 -15015892 - B2_Mm1t SINE B2 0 193 2 7 1260 471 235 53 83 chr15 88479082 88479307 -15015667 - L1MB3 LINE L1 -1698 4442 4226 7 1260 506 263 152 38 chr15 88479308 88479597 -15015377 - L1MB3 LINE L1 -2068 4072 3751 7 1260 328 88 35 0 chr15 88479614 88479671 -15015303 + (TA)n Simple_repeat Simple_repeat 2 60 0 7 1260 2170 116 87 5 chr15 88482151 88482532 -15012442 + Lx4A LINE L1 6630 7041 -17 7 1260 21 0 0 0 chr15 88482532 88482553 -15012421 + AT_rich Low_complexity Low_complexity 1 21 0 7 1260 192 97 0 0 chr15 88483349 88483380 -15011594 + (CTG)n Simple_repeat Simple_repeat 1 31 0 7 1260 785 236 28 22 chr15 88484754 88484932 -15010042 + MTE2b LTR MaLR 1 179 -200 7 1260 668 219 119 50 chr15 88485081 88485283 -15009691 + B3 SINE B2 1 216 0 7 1260 256 303 14 27 chr15 88485439 88485585 -15009389 - L1M4b LINE L1 -727 6317 6174 7 1260 294 123 0 0 chr15 88485647 88485704 -15009270 + (TG)n Simple_repeat Simple_repeat 1 57 0 7 1260 741 302 31 50 chr15 88485736 88485997 -15008977 - B4A SINE B4 -35 257 2 7 1260 778 260 61 59 chr15 88486017 88486169 -15008805 - L1M4b LINE L1 -898 6108 5947 7 1260 1556 28 0 6 chr15 88486169 88486346 -15008628 + B2_Mm2 SINE B2 1 176 -19 7 1260 369 0 0 0 chr15 88486350 88486391 -15008583 + (GA)n Simple_repeat Simple_repeat 1 41 0 7 1260 778 260 61 59 chr15 88486391 88486426 -15008548 - L1M4b LINE L1 -1060 5946 5920 7 1260 3967 77 0 0 chr15 88486426 88486922 -15008052 - L1_Mus4 LINE L1 -5 6631 6136 7 1260 778 260 61 59 chr15 88486922 88487120 -15007854 - L1M4b LINE L1 -1087 5919 5720 7 1260 1324 52 46 6 chr15 88487135 88487308 -15007666 + B2_Mm2 SINE B2 2 181 -14 7 1260 1255 183 0 49 chr15 88487323 88487547 -15007427 + B3 SINE B2 1 213 -3 7 1260 771 242 69 23 chr15 88487668 88487884 -15007090 + B4A SINE B4 1 226 -66 7 1260 276 149 0 0 chr15 88487884 88487931 -15007043 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 7 1260 741 302 10 37 chr15 88488140 88488436 -15006538 - B4A SINE B4 -3 289 2 7 1260 594 315 2 20 chr15 88488437 88488677 -15006297 - L1M4b LINE L1 -1491 5509 5271 7 1260 295 255 59 30 chr15 88488684 88488785 -15006189 - L1M4b LINE L1 -2840 4166 4063 7 1260 667 176 17 8 chr15 88488987 88489107 -15005867 - RSINE1 SINE B4 -42 123 3 7 1260 371 298 96 34 chr15 88489272 88489449 -15005525 - L1M4b LINE L1 -7040 294 107 7 1260 263 93 23 0 chr15 88489467 88489510 -15005464 + (TA)n Simple_repeat Simple_repeat 1 44 0 7 1260 345 231 15 0 chr15 88489640 88489705 -15005269 + ID4 SINE ID 18 83 0 7 1260 315 329 0 0 chr15 88490130 88490215 -15004759 + L1MEg LINE L1 1839 1923 -4161 7 1260 278 346 0 19 chr15 88490475 88490631 -15004343 + L1ME3B LINE L1 5817 5969 -271 7 1260 396 299 89 6 chr15 88491248 88491406 -15003568 - RMER15 LTR ERVL 0 575 405 7 1260 263 309 6 44 chr15 88492819 88492978 -15001996 + G-rich Low_complexity Low_complexity 1 153 0 7 1260 198 0 0 0 chr15 88493146 88493168 -15001806 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 1260 469 240 194 7 chr15 88493976 88494131 -15000843 - MTEb LTR MaLR -168 211 28 7 1260 1451 18 0 0 chr15 88494372 88494540 -15000434 + L1Md_T LINE L1 5419 5586 -297 7 1260 8717 24 0 0 chr15 88494540 88495525 -14999449 + L1Md_T LINE L1 5587 6571 -11 7 1260 24 0 0 0 chr15 88495525 88495549 -14999425 + AT_rich Low_complexity Low_complexity 1 24 0 7 1260 777 172 0 15 chr15 88495772 88495908 -14999066 + B1_Mur2 SINE Alu 15 148 -1 7 1260 1009 123 14 0 chr15 88495918 88496064 -14998910 + B1_Mur4 SINE Alu 1 148 -2 7 1260 208 154 26 0 chr15 88496065 88496104 -14998870 + (CAA)n Simple_repeat Simple_repeat 2 41 0 7 1260 258 146 0 77 chr15 88496107 88496159 -14998815 + B2_Mm2 SINE B2 1 48 -147 7 1260 343 297 55 93 chr15 88496199 88496511 -14998463 - L1MD LINE L1 -3201 2945 2646 7 1260 334 275 71 27 chr15 88496651 88496834 -14998140 - L1MEc LINE L1 -3716 2603 2413 7 1260 207 0 0 0 chr15 88496861 88496884 -14998090 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 7 1260 203 0 37 0 chr15 88496931 88496958 -14998016 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 7 1260 850 159 0 0 chr15 88496962 88497094 -14997880 - B1_Mur4 SINE Alu -13 137 6 7 1260 468 214 57 19 chr15 88497171 88497276 -14997698 - PB1D10 SINE Alu 0 117 9 7 1260 343 268 126 11 chr15 88497299 88497473 -14997501 - L1MEc LINE L1 -4081 2319 2126 7 1260 261 0 0 0 chr15 88497508 88497537 -14997437 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1260 235 260 120 40 chr15 88497928 88498028 -14996946 + MLT1A0 LTR MaLR 44 151 -214 7 1260 335 273 40 40 chr15 88498209 88498335 -14996639 - L1MEc LINE L1 -4634 1781 1656 7 1260 372 275 159 0 chr15 88498352 88498490 -14996484 - L1MEc LINE L1 -4909 1491 1332 7 1260 265 266 176 24 chr15 88498516 88498731 -14996243 + L1M5 LINE L1 5474 5730 -449 7 1260 558 202 48 40 chr15 88498779 88498923 -14996051 + ID_B1 SINE B4 66 203 -21 7 1260 239 238 191 0 chr15 88499021 88499084 -14995890 + B4A SINE B4 218 292 0 7 1260 235 115 19 37 chr15 88499097 88499151 -14995823 + (CA)n Simple_repeat Simple_repeat 1 53 0 7 1260 389 316 38 29 chr15 88499397 88499635 -14995339 + L1MCa LINE L1 2 241 -6267 7 1260 378 0 0 0 chr15 88499878 88499920 -14995054 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 1260 1278 71 0 0 chr15 88500000 88500170 -14994804 + (GGAAA)n Simple_repeat Simple_repeat 5 174 0 1 1260 786 127 0 0 chr15 88500182 88500308 -14994666 + (GGAA)n Simple_repeat Simple_repeat 3 128 0 2 1260 572 69 434 38 chr15 88500408 88500514 -14994460 + B1_Mus1 SINE Alu 1 148 0 3 1260 386 303 17 22 chr15 88500703 88500882 -14994092 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 4 1260 814 261 38 41 chr15 88501351 88501493 -14993481 - L1MC LINE L1 -2079 4067 3917 5 1260 1606 31 0 30 chr15 88501493 88501692 -14993282 - B2_Mm1a SINE B2 0 193 1 6 1260 1213 58 127 0 chr15 88501696 88501869 -14993105 - B2_Mm2 SINE B2 0 195 1 7 1260 814 261 38 41 chr15 88501869 88502061 -14992913 - L1MC LINE L1 -2230 3916 3729 5 1260 950 144 222 0 chr15 88502204 88502371 -14992603 - B3 SINE B2 -12 204 1 8 1260 23 54 0 0 chr15 88502418 88502455 -14992519 + AT_rich Low_complexity Low_complexity 1 37 0 9 1260 244 230 41 74 chr15 88502696 88502818 -14992156 + L1MA6 LINE L1 6136 6253 -47 1 1260 566 206 0 0 chr15 88502846 88502943 -14992031 - B1_Mur1 SINE Alu -6 143 47 1 1260 719 93 9 0 chr15 88502944 88503052 -14991922 + ORR1C2 LTR MaLR 1 109 -275 1 1260 3141 32 10 13 chr15 88503052 88503437 -14991537 + L1Md_F3 LINE L1 6201 6584 0 1 1260 1133 127 133 122 chr15 88503495 88503601 -14991373 + ORR1C2 LTR MaLR 97 185 -199 1 1260 491 0 17 0 chr15 88503601 88503660 -14991314 + (GA)n Simple_repeat Simple_repeat 2 61 0 1 1260 1133 127 133 122 chr15 88503660 88503823 -14991151 + ORR1C2 LTR MaLR 186 369 -15 1 1260 444 244 0 0 chr15 88503820 88503898 -14991076 - B1F SINE Alu -67 82 5 1 1260 329 298 10 31 chr15 88503898 88503917 -14991057 - ID_B1 SINE B4 -64 160 66 1 1260 760 264 147 66 chr15 88503948 88504750 -14990224 - L1MC LINE L1 -2450 3696 2765 5 1260 321 68 0 0 chr15 88504750 88504794 -14990180 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1260 760 270 130 41 chr15 88504794 88504910 -14990064 - L1MC LINE L1 -3382 2764 2645 5 1260 238 237 120 78 chr15 88505250 88505392 -14989582 + MLT1E2 LTR MaLR 304 451 -176 1 1260 448 228 74 4 chr15 88505419 88505543 -14989431 - MTD LTR MaLR -2 377 238 1 1260 407 305 48 16 chr15 88505580 88505726 -14989248 - MTD LTR MaLR -127 294 145 1 1260 2177 123 75 3 chr15 88505726 88506061 -14988913 + ORR1B2 LTR MaLR 1 359 -8 2 1260 578 218 38 64 chr15 88506062 88506219 -14988755 - MTD LTR MaLR -263 156 4 1 1260 199 157 42 28 chr15 88506959 88507031 -14987943 + CT-rich Low_complexity Low_complexity 6 78 0 2 1260 1297 115 5 10 chr15 88507648 88507841 -14987133 - B2_Mm2 SINE B2 0 195 4 2 1260 1017 47 0 15 chr15 88507865 88507879 -14987095 - B1_Mus1 SINE Alu 0 148 136 2 1260 392 0 0 20 chr15 88507879 88507928 -14987046 + (TTTTG)n Simple_repeat Simple_repeat 1 48 0 2 1260 1017 47 0 15 chr15 88507928 88508044 -14986930 - B1_Mus1 SINE Alu -13 135 20 2 1260 692 173 14 54 chr15 88508047 88508194 -14986780 - B1_Mur3 SINE Alu 0 149 9 2 1260 1112 148 111 24 chr15 88508870 88509078 -14985896 - URR1A DNA MER1_type 0 226 1 2 1260 1715 240 36 28 chr15 88509272 88509765 -14985209 - RLTR16 LTR ERVK -4 501 5 2 1260 342 213 0 16 chr15 88510279 88510341 -14984633 + B1_Mur3 SINE Alu 1 61 -88 2 1260 273 57 0 0 chr15 88510456 88510491 -14984483 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 2 1260 976 229 29 19 chr15 88510665 88510874 -14984100 - B3 SINE B2 -4 212 2 3 1260 609 218 50 50 chr15 88510893 88511033 -14983941 + B1_Mur1 SINE Alu 7 146 -3 3 1260 306 0 0 0 chr15 88511695 88511729 -14983245 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1260 933 210 89 21 chr15 88511775 88512022 -14982952 - Lx5 LINE L1 -185 6865 6615 3 1260 3405 28 8 8 chr15 88512048 88512444 -14982530 - MTA_Mm LTR MaLR 0 396 1 3 1260 3779 47 14 22 chr15 88512529 88513029 -14981945 - LTRIS2 LTR ERV1 0 564 69 3 1260 1167 49 21 0 chr15 88513089 88513232 -14981742 + B1_Mm SINE Alu 2 147 0 3 1260 726 142 123 45 chr15 88513566 88513721 -14981253 - ORR1B1 LTR MaLR -1 393 227 3 1260 231 260 200 40 chr15 88514483 88514583 -14980391 - MLT1J LTR MaLR -154 358 243 3 1260 234 0 0 0 chr15 88514873 88514899 -14980075 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1260 544 208 318 0 chr15 88514977 88515131 -14979843 + B3 SINE B2 2 204 -12 4 1260 392 193 205 26 chr15 88515162 88515279 -14979695 - B1_Mus1 SINE Alu -9 139 2 4 1260 1222 34 0 20 chr15 88515316 88515465 -14979509 - B1_Mm SINE Alu -1 146 1 4 1260 1001 293 129 48 chr15 88515747 88516335 -14978639 + Lx8 LINE L1 6823 7458 -15 4 1260 26 53 0 17 chr15 88516344 88516363 -14978611 + AT_rich Low_complexity Low_complexity 1 19 0 4 1260 1669 21 0 0 chr15 88516363 88516549 -14978425 + B2_Mm1a SINE B2 2 187 -6 4 1260 26 53 0 17 chr15 88516549 88516587 -14978387 + AT_rich Low_complexity Low_complexity 1 38 0 4 1260 1127 83 14 0 chr15 88520824 88520969 -14974005 + B1_Mus1 SINE Alu 2 148 0 4 1260 261 0 0 0 chr15 88521495 88521524 -14973450 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 1260 216 0 0 0 chr15 88521524 88521547 -14973427 + (CG)n Simple_repeat Simple_repeat 2 25 0 4 1260 499 188 448 0 chr15 88522431 88522585 -14972389 - ID_B1 SINE B4 -1 223 1 5 1260 182 118 29 0 chr15 88522984 88523018 -14971956 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 5 1260 262 230 0 67 chr15 88523028 88523142 -14971832 + ID4 SINE ID 12 113 -39 5 1260 307 301 35 88 chr15 88527782 88527895 -14967079 + PB1D10 SINE Alu 1 107 -10 5 1260 573 55 0 0 chr15 88528059 88528132 -14966842 + (CA)n Simple_repeat Simple_repeat 1 73 0 5 1260 1556 42 21 0 chr15 88528479 88528668 -14966306 + B2_Mm1a SINE B2 1 193 0 5 1260 2685 214 131 22 chr15 88528736 88529430 -14965544 + ORR1D1-int LTR MaLR 601 1370 0 5 1260 1574 188 33 93 chr15 88529430 88529828 -14965146 + ORR1D1 LTR MaLR 1 374 0 5 1260 368 193 47 35 chr15 88530279 88530365 -14964609 - B1_Mus2 SINE Alu -1 146 60 5 1260 330 45 0 0 chr15 88530383 88530427 -14964547 + (CAGA)n Simple_repeat Simple_repeat 2 45 0 5 1260 834 48 186 0 chr15 88532160 88532284 -14962690 - B1_Mus2 SINE Alu 0 147 1 5 1260 884 205 41 26 chr15 88532490 88532685 -14962289 + B3A SINE B2 1 198 0 6 1260 486 46 0 0 chr15 88533625 88533690 -14961284 + (TCC)n Simple_repeat Simple_repeat 1 65 0 6 1260 480 227 26 35 chr15 88535189 88535303 -14959671 - B1_Mus2 SINE Alu 0 147 35 6 1260 306 307 51 26 chr15 88536950 88537067 -14957907 + RSINE1 SINE B4 5 124 -41 6 1260 712 132 20 16 chr15 88537894 88538017 -14956957 - B1_Mus1 SINE Alu -1 147 24 6 1260 305 173 296 0 chr15 88538684 88538765 -14956209 - PB1D10 SINE Alu -2 125 21 6 1260 1923 107 76 0 chr15 88538804 88539095 -14955879 + ORR1A2 LTR MaLR 7 319 -8 6 1260 6182 155 187 104 chr15 88539098 88540909 -14954065 + ORR1A2-int LTR MaLR 3 1963 0 6 1260 2044 92 114 14 chr15 88540909 88541206 -14953768 + ORR1A2 LTR MaLR 1 327 0 6 1260 380 233 44 0 chr15 88541707 88541797 -14953177 - ID_B1 SINE B4 -6 218 125 6 1260 521 252 59 0 chr15 88541907 88542026 -14952948 - B1F1 SINE Alu 0 149 24 6 1260 746 246 0 0 chr15 88542421 88542559 -14952415 + B1_Mur1 SINE Alu 6 143 -6 6 1260 341 269 233 8 chr15 88545845 88545965 -14949009 + B1_Mur1 SINE Alu 2 148 -1 7 1260 958 103 38 13 chr15 88546455 88546612 -14948362 + ORR1A4 LTR MaLR 169 329 0 7 1260 511 186 132 39 chr15 88548673 88548802 -14946172 - B1_Mus2 SINE Alu -5 142 2 7 1260 1147 69 7 0 chr15 88548976 88549120 -14945854 + B1_Mus1 SINE Alu 2 146 -2 7 1260 1235 41 7 0 chr15 88549970 88550116 -14944858 - B1_Mm SINE Alu 0 147 1 7 1260 234 186 314 0 chr15 88550503 88550589 -14944385 + PB1D7 SINE Alu 1 113 -7 7 1260 1156 56 21 0 chr15 88550597 88550741 -14944233 + B1_Mus2 SINE Alu 1 147 0 7 1260 1654 36 0 0 chr15 88550827 88551019 -14943955 - B2_Mm1a SINE B2 0 193 2 7 1260 424 147 263 0 chr15 88551088 88551183 -14943791 + B1_Mur2 SINE Alu 30 149 0 7 1260 35 0 0 0 chr15 88551362 88551397 -14943577 + AT_rich Low_complexity Low_complexity 1 35 0 7 1260 373 222 248 0 chr15 88551526 88551643 -14943331 + B1F2 SINE Alu 4 149 0 8 1260 22 0 0 0 chr15 88551644 88551666 -14943308 + AT_rich Low_complexity Low_complexity 1 22 0 8 1260 220 45 0 83 chr15 88552278 88552326 -14942648 + (TTG)n Simple_repeat Simple_repeat 2 45 0 8 1260 1183 55 7 7 chr15 88552326 88552463 -14942511 - B1_Mus1 SINE Alu -10 138 1 8 1260 23 0 0 0 chr15 88552841 88552864 -14942110 + AT_rich Low_complexity Low_complexity 1 23 0 8 1260 256 241 73 97 chr15 88553381 88553505 -14941469 + MT2B LTR ERVL 120 240 -361 8 1260 268 326 21 0 chr15 88553415 88553510 -14941464 + B4A SINE B4 70 166 -126 8 1260 371 223 123 0 chr15 88553434 88553535 -14941439 + B1_Mus1 SINE Alu 5 120 0 8 1260 249 146 98 0 chr15 88553555 88553596 -14941378 + URR1B DNA MER1_type 1 45 -180 8 1260 235 143 24 0 chr15 88553609 88553651 -14941323 + URR1B DNA MER1_type 139 181 -44 8 1260 1026 130 50 0 chr15 88554258 88554419 -14940555 + B2_Mm1t SINE B2 11 179 -14 8 1260 315 127 0 113 chr15 88554470 88554532 -14940442 + B2_Mm2 SINE B2 47 101 -94 9 1260 305 268 125 39 chr15 88555100 88555228 -14939746 - Tigger5 DNA MER2_type -2209 197 59 9 1260 583 164 163 8 chr15 88555242 88555365 -14939609 + B1_Mur1 SINE Alu 1 142 -7 9 1260 219 69 0 0 chr15 88555413 88555442 -14939532 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 9 1260 255 61 0 0 chr15 88555456 88555489 -14939485 + (GA)n Simple_repeat Simple_repeat 2 34 0 9 1260 343 193 263 0 chr15 88556043 88556157 -14938817 + B1_Mus1 SINE Alu 5 148 0 9 1260 1279 34 0 7 chr15 88556193 88556341 -14938633 + B1_Mm SINE Alu 1 147 0 9 1260 549 175 71 25 chr15 88556444 88556578 -14938396 + B1_Mus2 SINE Alu 10 145 -5 9 1260 320 59 20 0 chr15 88556776 88556827 -14938147 + (CAAAAA)n Simple_repeat Simple_repeat 3 54 0 9 1260 737 191 7 22 chr15 88556881 88557020 -14937954 - B1_Mur2 SINE Alu 0 149 13 9 1260 588 204 26 58 chr15 88557073 88557229 -14937745 + B3 SINE B2 66 216 0 1 1260 1292 89 28 0 chr15 88557249 88557429 -14937545 + B2_Mm1a SINE B2 1 185 -8 1 1260 229 289 0 0 chr15 88557453 88557505 -14937469 - MurSatRep1 Unknown Unknown -1854 283 232 1 1260 1512 33 5 47 chr15 88557507 88557700 -14937274 + B2_Mm1a SINE B2 2 186 -7 1 1260 225 250 0 0 chr15 88557738 88557786 -14937188 + (CAAGA)n Simple_repeat Simple_repeat 5 52 0 1 1260 283 309 61 70 chr15 88557789 88557904 -14937070 + B1F SINE Alu 33 146 -3 1 1260 1197 14 0 0 chr15 88558447 88558586 -14936388 + B1_Mm SINE Alu 9 147 0 1 1260 549 168 73 18 chr15 88558689 88558798 -14936176 + B1_Mus2 SINE Alu 10 124 -23 1 1260 270 99 71 0 chr15 88559239 88559295 -14935679 + PB1D9 SINE Alu 33 93 -27 1 1260 363 78 0 0 chr15 88562330 88562381 -14932593 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 1260 25 31 0 0 chr15 88563891 88563923 -14931051 + GC_rich Low_complexity Low_complexity 1 32 0 1 1260 240 293 10 20 chr15 88564000 88564101 -14930873 + C-rich Low_complexity Low_complexity 2 101 0 1 1260 69 88 0 17 chr15 88564361 88564593 -14930381 + GC_rich Low_complexity Low_complexity 1 228 0 1 1260 24 53 0 0 chr15 88564697 88564735 -14930239 + GC_rich Low_complexity Low_complexity 1 38 0 1 1260 180 184 0 0 chr15 88565371 88565420 -14929554 + CT-rich Low_complexity Low_complexity 2 50 0 1 1260 374 229 45 62 chr15 88565459 88565571 -14929403 - B1F1 SINE Alu 0 149 40 1 1260 647 146 368 6 chr15 88565643 88565809 -14929165 - URR1A DNA MER1_type 0 226 1 1 1260 587 179 103 0 chr15 88566290 88566407 -14928567 - B1_Mur4 SINE Alu 0 150 22 1 1260 373 161 33 110 chr15 88566327 88566418 -14928556 - MT2B LTR ERVL -347 254 171 1 1260 340 336 55 102 chr15 88566418 88566515 -14928459 - B4A SINE B4 -56 217 13 1 1260 1149 88 0 0 chr15 88566998 88567145 -14927829 - B1_Mus2 SINE Alu 0 147 1 1 1260 943 112 0 20 chr15 88567550 88567696 -14927278 + B1_Mus2 SINE Alu 5 147 0 1 1260 23 33 0 0 chr15 88567731 88567761 -14927213 + AT_rich Low_complexity Low_complexity 1 30 0 1 1260 496 142 248 0 chr15 88567893 88568006 -14926968 + B1_Mus1 SINE Alu 2 142 -6 1 1260 456 250 60 67 chr15 88568284 88568434 -14926540 - B1F1 SINE Alu 0 149 1 1 1260 22 35 0 0 chr15 88568447 88568476 -14926498 + AT_rich Low_complexity Low_complexity 1 29 0 1 1260 310 292 123 9 chr15 88568498 88568612 -14926362 - B3A SINE B2 -9 189 63 1 1260 647 214 210 3 chr15 88568997 88569297 -14925677 - MTE2b LTR MaLR 0 379 18 1 1260 410 235 92 35 chr15 88569322 88569463 -14925511 - B1F SINE Alu 0 149 1 1 1260 1147 68 7 0 chr15 88569587 88569733 -14925241 + B1_Mus2 SINE Alu 1 147 0 1 1260 435 303 63 47 chr15 88570554 88570807 -14924167 + LTR37B LTR ERV1 198 454 -14 1 1260 352 360 54 54 chr15 88570989 88571250 -14923724 + MLT1B LTR MaLR 78 338 -52 1 1260 880 75 0 8 chr15 88571270 88571391 -14923583 - B1_Mm SINE Alu 0 147 28 1 1260 903 309 84 26 chr15 88571403 88571950 -14923024 + L1MDa LINE L1 1356 1934 -4699 1 1260 529 335 50 32 chr15 88572033 88572206 -14922768 + B4A SINE B4 8 178 -114 1 1260 300 27 0 0 chr15 88572206 88572243 -14922731 + (CAAAT)n Simple_repeat Simple_repeat 2 38 0 1 1260 529 335 50 32 chr15 88572243 88572347 -14922627 + B4A SINE B4 179 289 -3 1 1260 618 239 42 78 chr15 88572660 88572851 -14922123 + RLTR23 LTR ERV1 247 430 0 1 1260 1206 106 37 5 chr15 88572963 88573152 -14921822 + B2_Mm2 SINE B2 1 195 0 1 1260 277 276 11 0 chr15 88573247 88573334 -14921640 + L1MDa LINE L1 2126 2213 -4420 1 1260 789 173 0 14 chr15 88573363 88573504 -14921470 + B1_Mur3 SINE Alu 11 149 0 1 1260 316 326 68 23 chr15 88573523 88573655 -14921319 + L1MDa LINE L1 2234 2371 -4262 1 1260 389 247 75 12 chr15 88573737 88573748 -14921226 + L1MDa LINE L1 2369 2378 -4255 1 1260 1424 71 11 0 chr15 88573748 88573931 -14921043 - B2_Mm1t SINE B2 -7 186 2 1 1260 389 247 75 12 chr15 88573931 88574079 -14920895 + L1MDa LINE L1 2379 2537 -4096 1 1260 1138 62 21 0 chr15 88574079 88574224 -14920750 + B1_Mus1 SINE Alu 1 148 0 1 1260 710 77 13 8 chr15 88574242 88574346 -14920628 - MT2B2 LTR ERVL -424 109 3 1 1260 743 165 79 0 chr15 88574431 88574558 -14920416 + B1_Mur3 SINE Alu 11 147 -2 1 1260 475 248 0 9 chr15 88574591 88574701 -14920273 + PB1D10 SINE Alu 1 109 -8 1 1260 662 273 36 41 chr15 88574704 88574899 -14920075 + B3A SINE B2 2 195 -3 1 1260 534 168 88 48 chr15 88574906 88575031 -14919943 - B3 SINE B2 -2 214 85 1 1260 441 103 0 14 chr15 88575012 88575081 -14919893 + B1_Mm SINE Alu 80 147 0 1 1260 935 105 82 32 chr15 88575094 88575252 -14919722 + B2_Mm2 SINE B2 27 192 -3 1 1260 807 192 68 28 chr15 88575387 88575564 -14919410 + ORR1C2 LTR MaLR 185 368 -16 1 1260 887 48 77 39 chr15 88575540 88575670 -14919304 - B1_Mus1 SINE Alu 0 148 14 1 1260 454 233 58 64 chr15 88575670 88575695 -14919279 - ID_B1 SINE B4 0 223 70 1 1260 304 127 127 0 chr15 88575677 88575732 -14919242 + ORR1D1 LTR MaLR 312 373 -1 1 1260 588 291 73 62 chr15 88575760 88576020 -14918954 + MLT2D LTR ERVL 91 353 -61 1 1260 234 239 42 56 chr15 88576027 88576098 -14918876 + ID4_ SINE ID 3 72 -11 1 1260 836 168 28 14 chr15 88576146 88576291 -14918683 + B1_Mus2 SINE Alu 1 147 0 1 1260 739 230 163 70 chr15 88576510 88576879 -14918095 + RMER10A LTR ERVL 27 429 -13 1 1260 611 247 57 34 chr15 88576881 88577057 -14917917 + B3A SINE B2 17 196 -2 1 1260 1270 101 22 0 chr15 88577079 88577257 -14917717 + B2_Mm2 SINE B2 1 182 -13 1 1260 459 74 299 16 chr15 88577268 88577374 -14917600 + B2_Mm2 SINE B2 46 186 -9 1 1260 1229 48 7 0 chr15 88577704 88577850 -14917124 - B1_Mus1 SINE Alu 0 148 2 1 1260 730 131 122 8 chr15 88577853 88577984 -14916990 - B1_Mur4 SINE Alu -2 148 3 1 1260 498 297 46 10 chr15 88578025 88578219 -14916755 + L1MD LINE L1 5052 5252 -894 1 1260 807 208 98 0 chr15 88579031 88579214 -14915760 + B3 SINE B2 3 203 -13 1 1260 617 195 6 89 chr15 88579272 88579441 -14915533 - B2_Mm2 SINE B2 0 195 41 1 1260 521 51 150 25 chr15 88579820 88579900 -14915074 + B1_Mm SINE Alu 58 147 0 1 1260 1261 27 7 0 chr15 88580040 88580186 -14914788 - B1_Mus2 SINE Alu 0 147 1 1 1260 32 26 0 0 chr15 88582037 88582076 -14912898 + GC_rich Low_complexity Low_complexity 1 39 0 1 1260 214 189 19 0 chr15 88582094 88582147 -14912827 + (CGG)n Simple_repeat Simple_repeat 1 54 0 1 1260 231 36 0 0 chr15 88582350 88582378 -14912596 + (CCCGG)n Simple_repeat Simple_repeat 4 31 0 1 1260 225 0 0 0 chr15 88583059 88583084 -14911890 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1260 241 203 33 17 chr15 88583333 88583393 -14911581 + MTD LTR MaLR 1 61 -358 1 1260 484 205 280 51 chr15 88583404 88583579 -14911395 - B3 SINE B2 -1 215 1 1 1260 795 221 12 48 chr15 88583594 88583805 -14911169 - B3 SINE B2 -2 191 1 1 1260 767 158 261 0 chr15 88583835 88584000 -14910974 - B3 SINE B2 -8 208 1 1 1260 1118 55 0 27 chr15 88584024 88584174 -14910800 - B1_Mm SINE Alu -1 146 1 1 1260 1153 196 150 19 chr15 88584200 88584460 -14910514 + MTD LTR MaLR 116 409 -10 1 1260 721 200 211 0 chr15 88584510 88584685 -14910289 + B3 SINE B2 4 215 -1 1 1260 1269 51 67 0 chr15 88584796 88584974 -14910000 + B2_Mm1a SINE B2 2 191 -2 1 1260 29 0 0 0 chr15 88584995 88585024 -14909950 + AT_rich Low_complexity Low_complexity 1 29 0 1 1260 760 152 29 57 chr15 88585791 88585931 -14909043 + B1_Mur3 SINE Alu 1 136 -13 1 1260 936 141 0 0 chr15 88586165 88586602 -14908372 + (TG)n Simple_repeat Simple_repeat 1 437 0 1 1260 28 29 0 0 chr15 88586955 88586990 -14907984 + AT_rich Low_complexity Low_complexity 1 35 0 1 1260 349 279 11 14 chr15 88587131 88587257 -14907717 - ID4 SINE ID -28 124 2 1 1260 1150 54 7 39 chr15 88587323 88587476 -14907498 - B1_Mus1 SINE Alu 0 148 1 1 1260 249 294 0 68 chr15 88587702 88587775 -14907199 + PB1 SINE Alu 15 82 -45 1 1260 429 54 0 0 chr15 88589769 88589825 -14905149 + (TCCCC)n Simple_repeat Simple_repeat 2 57 0 1 1260 673 175 102 8 chr15 88590213 88590340 -14904634 - B1_Mur4 SINE Alu -11 139 1 1 1260 192 77 0 0 chr15 88590924 88590950 -14904024 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1 1260 924 129 28 2 chr15 88590950 88591110 -14903864 - B2_Mm2 SINE B2 -41 175 1 1 1260 1580 16 60 0 chr15 88591127 88591309 -14903665 - B2_Mm1a SINE B2 0 193 1 1 1260 887 199 50 35 chr15 88591380 88591578 -14903396 + Lx9 LINE L1 7238 7438 -206 1 1260 1121 194 0 24 chr15 88591615 88591826 -14903148 + B3 SINE B2 1 206 -10 1 1260 289 187 88 61 chr15 88591839 88591953 -14903021 + Lx9 LINE L1 7516 7632 -12 1 1260 824 201 0 14 chr15 88591978 88592119 -14902855 - B1_Mur3 SINE Alu -10 139 1 1 1260 219 69 0 0 chr15 88592126 88592155 -14902819 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1260 447 281 69 35 chr15 88592582 88592726 -14902248 - B1_Mur1 SINE Alu 0 149 1 1 1260 270 346 29 9 chr15 88592777 88592882 -14902092 - PB1D10 SINE Alu -9 108 2 1 1260 398 148 16 0 chr15 88593232 88593293 -14901681 + RSINE1 SINE B4 69 130 -35 1 1260 491 292 111 0 chr15 88593330 88593474 -14901500 + RSINE1 SINE B4 2 161 -4 1 1260 215 93 23 0 chr15 88594094 88594137 -14900837 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 1260 1252 71 54 0 chr15 88594177 88594345 -14900629 + B2_Mm1a SINE B2 2 178 -15 1 1260 360 122 178 28 chr15 88594365 88594469 -14900505 + B2_Mm2 SINE B2 47 190 -3 1 1260 1068 71 29 0 chr15 88594473 88594613 -14900361 + B1_Mus1 SINE Alu 1 144 -4 2 1260 1113 75 0 7 chr15 88594701 88594848 -14900126 - B1_Mus2 SINE Alu 0 147 2 2 1260 613 26 0 25 chr15 88594848 88594921 -14900053 + B1_Mus2 SINE Alu 76 146 -1 2 1260 237 119 0 0 chr15 88594959 88595001 -14899973 + (TCTG)n Simple_repeat Simple_repeat 1 42 0 2 1260 267 347 31 0 chr15 88595036 88595134 -14899840 - B4A SINE B4 -48 244 144 2 1260 457 272 19 10 chr15 88595333 88595437 -14899537 - B4 SINE B4 -184 108 4 2 1260 581 161 125 0 chr15 88595588 88595700 -14899274 + B1_Mus2 SINE Alu 1 126 -21 2 1260 204 40 0 0 chr15 88595708 88595733 -14899241 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 1260 900 178 200 0 chr15 88595749 88595929 -14899045 + B3 SINE B2 1 216 0 2 1260 985 77 41 27 chr15 88595965 88596111 -14898863 + B1_Mus1 SINE Alu 1 148 0 2 1260 544 296 10 82 chr15 88596130 88596325 -14898649 + B3A SINE B2 5 185 -13 2 1260 373 174 244 65 chr15 88596344 88596467 -14898507 + B1_Mur2 SINE Alu 3 147 -2 2 1260 23 0 0 0 chr15 88596468 88596491 -14898483 + AT_rich Low_complexity Low_complexity 1 23 0 2 1260 718 86 29 0 chr15 88596546 88596651 -14898323 + PB1D9 SINE Alu 13 120 0 2 1260 949 202 112 0 chr15 88596667 88596855 -14898119 + B3 SINE B2 1 209 -7 2 1260 1224 48 0 7 chr15 88596906 88597054 -14897920 - B1_Mm SINE Alu 0 147 1 2 1260 1742 16 0 0 chr15 88597102 88597294 -14897680 - B2_Mm1a SINE B2 0 193 2 2 1260 30 89 0 0 chr15 88597492 88597571 -14897403 + AT_rich Low_complexity Low_complexity 1 79 0 2 1260 892 60 17 0 chr15 88597633 88597750 -14897224 + B1_Mus1 SINE Alu 30 148 0 2 1260 1471 62 5 25 chr15 88597775 88597972 -14897002 + B2_Mm1a SINE B2 1 193 0 2 1260 459 279 31 49 chr15 88599627 88599789 -14895185 + RSINE1 SINE B4 5 163 -2 2 1260 368 311 170 0 chr15 88600038 88600173 -14894801 - RSINE1 SINE B4 -4 161 4 2 1260 583 270 0 0 chr15 88600180 88600291 -14894683 - PB1D7 SINE Alu -5 115 5 2 1260 1074 76 28 0 chr15 88600597 88600742 -14894232 - B1_Mur4 SINE Alu 0 150 2 2 1260 317 269 50 8 chr15 88600825 88600945 -14894029 - L1MC5 LINE L1 -532 7429 7305 2 1260 338 264 104 74 chr15 88601024 88601159 -14893815 + B3A SINE B2 59 197 -1 2 1260 414 277 9 9 chr15 88601169 88601282 -14893692 + PB1D10 SINE Alu 1 113 -4 2 1260 402 278 214 24 chr15 88601623 88601833 -14893141 - RLTR24 LTR ERV1 0 529 280 2 1260 207 0 0 0 chr15 88601887 88601910 -14893064 + (T)n Simple_repeat Simple_repeat 1 23 0 2 1260 275 164 0 52 chr15 88601945 88602003 -14892971 - B2_Mm2 SINE B2 -94 101 47 2 1260 1226 94 47 0 chr15 88602050 88602220 -14892754 - B2_Mm1t SINE B2 -14 179 2 2 1260 347 271 219 20 chr15 88602555 88602751 -14892223 - RLTR14-int LTR ERV1 -150 5167 4933 2 157 1873 153 162 3 chr15 88604406 88604746 -14890228 + ORR1B1 LTR MaLR 1 394 0 2 1261 1265 211 156 15 chr15 88604751 88605079 -14889895 + ORR1D1 LTR MaLR 1 374 0 2 1261 1439 64 43 0 chr15 88605209 88605396 -14889578 - B2_Mm2 SINE B2 0 195 1 2 1261 1960 249 83 54 chr15 88605654 88606691 -14888283 - Lx6 LINE L1 0 7460 6053 2 1261 828 255 10 92 chr15 88606730 88606937 -14888037 - B4 SINE B4 -21 271 82 2 1261 1341 295 92 23 chr15 88606974 88607540 -14887434 - Lx9 LINE L1 -178 7466 6862 2 1261 224 231 185 0 chr15 88607567 88607632 -14887342 - B4 SINE B4 -215 77 1 2 1261 1136 167 183 65 chr15 88608067 88608158 -14886816 - RLTR14 LTR ERV1 0 382 296 2 1261 1240 48 0 0 chr15 88608158 88608305 -14886669 - B1_Mus2 SINE Alu 0 147 1 2 1261 1136 167 183 65 chr15 88608305 88608552 -14886422 - RLTR14 LTR ERV1 -87 295 4 2 1261 277 313 76 76 chr15 88608589 88608666 -14886308 - B3A SINE B2 0 198 2 2 1261 502 239 42 25 chr15 88608666 88608786 -14886188 - RSINE1 SINE B4 -41 124 3 2 1261 645 237 148 17 chr15 88608985 88609161 -14885813 + B3 SINE B2 1 199 -17 2 1261 568 285 14 0 chr15 88609170 88609314 -14885660 - B1_Mur1 SINE Alu -2 147 2 2 1261 578 260 61 8 chr15 88609344 88609476 -14885498 + B1_Mur1 SINE Alu 10 148 -1 2 1261 23 0 0 0 chr15 88614035 88614058 -14880916 + AT_rich Low_complexity Low_complexity 1 23 0 2 1261 183 42 0 0 chr15 88614987 88615011 -14879963 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1261 1148 58 0 0 chr15 88615011 88615149 -14879825 - B1_Mus1 SINE Alu -10 138 1 2 1261 243 97 0 0 chr15 88615216 88615247 -14879727 + RMER16 LTR ERVK 418 448 -85 2 1261 261 139 0 0 chr15 88615247 88615290 -14879684 + (A)n Simple_repeat Simple_repeat 1 43 0 2 1261 799 245 71 14 chr15 88615647 88615858 -14879116 - ID_B1 SINE B4 -1 223 1 2 1261 233 306 34 51 chr15 88616014 88616131 -14878843 - RLTR13D3 LTR ERVK 0 929 815 2 1261 313 218 155 20 chr15 88616794 88616899 -14878075 - RLTR13D3 LTR ERVK -862 121 1 2 1261 1633 16 21 0 chr15 88617116 88617304 -14877670 - B2_Mm1a SINE B2 -1 192 1 2 1261 1836 164 66 0 chr15 88617411 88617715 -14877259 - MTC LTR MaLR -2 419 96 2 1261 476 163 18 55 chr15 88617714 88617824 -14877150 - PB1D9 SINE Alu -6 114 9 2 1261 681 140 19 0 chr15 88617826 88617933 -14877041 - MTC LTR MaLR -312 109 1 2 1261 292 93 23 0 chr15 88617935 88617978 -14876996 - RLTR18B LTR ERVK -244 268 225 2 1261 407 229 105 0 chr15 88618002 88618107 -14876867 - RLTR18B LTR ERVK -357 155 40 2 1261 21 71 0 0 chr15 88618340 88618382 -14876592 + AT_rich Low_complexity Low_complexity 1 42 0 2 1261 519 29 29 0 chr15 88618528 88618597 -14876377 - B1_Mm SINE Alu 0 147 77 2 1261 248 271 130 39 chr15 88618778 88619008 -14875966 + L1MA4 LINE L1 1219 1469 -4844 2 1261 358 296 53 53 chr15 88619548 88619698 -14875276 + L1MA4 LINE L1 1645 1794 -4590 2 1261 457 229 225 18 chr15 88619888 88620057 -14874917 + ID_B1 SINE B4 2 205 -19 2 1261 713 203 94 22 chr15 88620091 88620272 -14874702 + B2_Mm2 SINE B2 2 195 0 2 1261 356 224 58 23 chr15 88620388 88620475 -14874499 + MT2B LTR ERVL 168 257 -344 2 1261 906 53 0 0 chr15 88620407 88620520 -14874454 + B1_Mm SINE Alu 35 147 0 2 1261 310 329 177 37 chr15 88620545 88620845 -14874129 + L1MA4 LINE L1 2582 2923 -3459 2 1261 875 176 21 7 chr15 88620886 88621029 -14873945 - B1_Mur2 SINE Alu -2 147 3 2 1261 810 195 7 0 chr15 88621111 88621260 -14873714 + B1_Mur4 SINE Alu 1 150 0 2 1261 216 0 0 0 chr15 88621332 88621356 -14873618 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 1261 943 141 0 7 chr15 88621369 88621505 -14873469 - B1_Mur4 SINE Alu -14 136 2 2 1261 279 317 89 8 chr15 88621630 88621754 -14873220 - ID_B1 SINE B4 0 224 91 2 1261 285 237 43 3 chr15 88621777 88621881 -14873093 + L1MA4 LINE L1 3126 3231 -3145 2 1261 225 143 0 87 chr15 88621946 88621992 -14872982 + PB1D9 SINE Alu 77 118 -2 2 1261 411 299 101 20 chr15 88622140 88622498 -14872476 + L1MA4 LINE L1 3355 3741 -2638 2 1261 2140 126 22 0 chr15 88622554 88622872 -14872102 + ORR1A4 LTR MaLR 5 329 0 2 1261 28 0 0 0 chr15 88622886 88622914 -14872060 + AT_rich Low_complexity Low_complexity 1 28 0 2 1261 370 337 147 60 chr15 88622920 88623138 -14871836 + B4 SINE B4 44 280 -12 2 1261 249 302 0 19 chr15 88623107 88623161 -14871813 + RSINE1 SINE B4 106 158 -7 2 1261 231 114 0 0 chr15 88623179 88623214 -14871760 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1261 320 229 238 0 chr15 88623230 88623335 -14871639 + L1MA4 LINE L1 3745 3874 -2505 2 1261 1198 62 0 14 chr15 88623400 88623548 -14871426 + B1_Mus1 SINE Alu 2 147 -1 2 1261 22 0 0 0 chr15 88623555 88623577 -14871397 + AT_rich Low_complexity Low_complexity 1 22 0 2 1261 594 171 69 54 chr15 88623650 88623780 -14871194 + MT2B LTR ERVL 1 132 -469 2 1261 969 206 21 86 chr15 88623774 88623936 -14871038 + MT2B LTR ERVL 384 546 -55 2 1261 372 22 0 0 chr15 88623936 88623981 -14870993 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1261 969 206 21 86 chr15 88623981 88624051 -14870923 + MT2B LTR ERVL 547 600 -1 2 1261 954 249 155 33 chr15 88624118 88624421 -14870553 - ORR1D1 LTR MaLR 0 374 35 2 1261 40 0 0 0 chr15 88624472 88624512 -14870462 + AT_rich Low_complexity Low_complexity 1 40 0 2 1261 831 245 52 29 chr15 88624520 88624730 -14870244 + B3 SINE B2 1 215 -1 2 1261 623 239 8 0 chr15 88624733 88624857 -14870117 + B1_Mur2 SINE Alu 1 125 -24 2 1261 1564 139 24 119 chr15 88624857 88625125 -14869849 - ORR1C2 LTR MaLR 0 384 130 2 1261 1649 47 0 0 chr15 88625125 88625317 -14869657 - B2_Mm1t SINE B2 0 193 2 2 1261 1564 139 24 119 chr15 88625317 88625351 -14869623 - ORR1C2 LTR MaLR -255 129 113 2 1261 3898 125 98 157 chr15 88625351 88626145 -14868829 - RLTR13B3 LTR ERVK 0 929 206 2 1261 1420 50 21 42 chr15 88626145 88626334 -14868640 + B2_Mm1a SINE B2 1 185 -8 2 1261 3898 125 98 157 chr15 88626334 88626526 -14868448 - RLTR13B3 LTR ERVK -724 205 1 2 1261 1564 139 24 119 chr15 88626526 88626557 -14868417 - ORR1C2 LTR MaLR -272 112 82 2 1261 805 279 84 90 chr15 88626577 88627113 -14867861 + L1MA4 LINE L1 4995 5527 -852 2 1261 332 252 52 77 chr15 88627166 88627321 -14867653 + L1MA4 LINE L1 5653 5803 -730 2 1261 1098 230 100 33 chr15 88627322 88627507 -14867467 - MTD LTR MaLR -2 417 213 2 1261 1433 75 38 0 chr15 88627507 88627693 -14867281 - B2_Mm2 SINE B2 -2 193 1 2 1261 1098 230 100 33 chr15 88627693 88627777 -14867197 - MTD LTR MaLR -207 212 130 2 1261 630 122 18 27 chr15 88627827 88627937 -14867037 - B1_Mur3 SINE Alu 0 149 41 2 1261 440 361 0 0 chr15 88627944 88628208 -14866766 + C-rich Low_complexity Low_complexity 1 264 0 2 1261 612 230 3 25 chr15 88628076 88628439 -14866535 + CT-rich Low_complexity Low_complexity 1 354 0 2 1261 262 254 0 33 chr15 88628474 88628535 -14866439 - B1_Mur4 SINE Alu -90 60 2 2 1261 528 188 153 23 chr15 88628535 88628661 -14866313 - MTD LTR MaLR -276 143 1 2 1261 520 160 102 23 chr15 88628663 88628791 -14866183 - MTD-int LTR MaLR -2 1256 1119 2 1261 588 305 33 7 chr15 88628791 88628943 -14866031 + B3A SINE B2 1 156 -42 2 1261 327 113 0 0 chr15 88628951 88629004 -14865970 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1261 471 250 301 25 chr15 88629011 88629290 -14865684 - MTD-int LTR MaLR -105 1153 798 2 1261 733 216 22 0 chr15 88629277 88629416 -14865558 - MTD LTR MaLR -259 160 19 2 1261 956 254 52 38 chr15 88629416 88629784 -14865190 + L1MA4 LINE L1 5796 6168 -368 2 1261 234 174 0 0 chr15 88629793 88629839 -14865135 + (TATG)n Simple_repeat Simple_repeat 2 47 0 2 1261 847 189 204 6 chr15 88629894 88630070 -14864904 - B3 SINE B2 -5 211 1 2 1261 1113 184 48 10 chr15 88630108 88630316 -14864658 - B3 SINE B2 0 216 1 2 1261 21 0 0 0 chr15 88630555 88630576 -14864398 + GC_rich Low_complexity Low_complexity 1 21 0 2 1261 216 97 0 0 chr15 88631002 88631033 -14863941 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1261 448 85 14 8 chr15 88631077 88631181 -14863793 - B2_Mm2 SINE B2 -6 189 47 2 1261 1417 62 23 0 chr15 88631208 88631384 -14863590 - B2_Mm2 SINE B2 -14 181 2 3 1261 304 311 44 44 chr15 88631394 88631552 -14863422 + L1ME1 LINE L1 5712 5869 -310 3 1261 1429 164 164 112 chr15 88631553 88631938 -14863036 + MTD LTR MaLR 1 405 -14 3 1261 3283 21 0 5 chr15 88632018 88632392 -14862582 + L1Md_F2 LINE L1 6203 6574 -8 3 1261 310 274 14 0 chr15 88633236 88633309 -14861665 + L1M LINE L1 5279 5352 -772 3 1261 238 386 19 50 chr15 88633826 88633987 -14860987 + RMER4A LTR ERVK 8 163 -303 3 1261 320 241 25 12 chr15 88634446 88634526 -14860448 + ID4_ SINE ID 1 81 -2 3 1261 374 291 52 47 chr15 88634530 88634721 -14860253 + L1MC4 LINE L1 6653 6844 -1198 3 1261 705 239 216 26 chr15 88635136 88635368 -14859606 + B4 SINE B4 4 279 -13 3 1261 303 49 0 0 chr15 88635780 88635821 -14859153 + (TGG)n Simple_repeat Simple_repeat 1 41 0 3 1261 1248 73 56 6 chr15 88636635 88636815 -14858159 + B2_Mm2 SINE B2 2 190 -5 3 1261 603 0 0 0 chr15 88637324 88637391 -14857583 + (CA)n Simple_repeat Simple_repeat 1 67 0 3 1261 195 42 0 0 chr15 88637579 88637603 -14857371 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3 1261 828 173 0 35 chr15 88637603 88637747 -14857227 - B1_Mur3 SINE Alu -10 139 1 3 1261 545 169 99 145 chr15 88637856 88638008 -14856966 + B1_Mur4 SINE Alu 1 145 -5 3 1261 387 56 0 0 chr15 88638049 88638103 -14856871 + (CCAA)n Simple_repeat Simple_repeat 2 55 0 3 1261 300 320 48 0 chr15 88638150 88638253 -14856721 + PB1D10 SINE Alu 2 109 -8 3 1261 311 248 48 38 chr15 88638259 88638364 -14856610 + RSINE1 SINE B4 3 108 -57 3 1261 549 0 0 0 chr15 88638403 88638464 -14856510 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 1261 440 291 24 107 chr15 88639335 88639504 -14855470 - B4A SINE B4 -137 155 1 3 1261 604 286 133 0 chr15 88639663 88639859 -14855115 - ID_B1 SINE B4 -1 223 2 3 1261 274 291 61 51 chr15 88639867 88639999 -14854975 - B1F SINE Alu -4 145 1 3 1261 407 250 52 26 chr15 88640264 88640379 -14854595 + MER58B DNA MER1_type 220 337 -4 3 1261 1115 37 7 0 chr15 88640392 88640527 -14854447 - B1_Mus1 SINE Alu -11 137 2 3 1261 295 184 0 0 chr15 88640608 88640657 -14854317 - ORR1E LTR MaLR -282 77 29 3 1261 347 209 15 0 chr15 88641421 88641488 -14853486 - B1_Mus1 SINE Alu -79 69 2 3 1261 413 108 430 0 chr15 88641513 88641606 -14853368 - B1_Mur4 SINE Alu -15 135 3 3 1261 1174 22 50 0 chr15 88642931 88643070 -14851904 + B1_Mus2 SINE Alu 2 147 0 3 1261 315 0 0 0 chr15 88643076 88643111 -14851863 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 3 1261 560 292 70 23 chr15 88643112 88643284 -14851690 + B3A SINE B2 1 180 -18 3 1261 30 0 0 0 chr15 88643305 88643335 -14851639 + AT_rich Low_complexity Low_complexity 1 30 0 3 1261 877 190 0 0 chr15 88643344 88643486 -14851488 + RSINE1 SINE B4 2 143 -22 3 1261 243 0 0 0 chr15 88643489 88643516 -14851458 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1261 634 228 48 81 chr15 88643562 88643627 -14851347 + B4 SINE B4 19 76 -216 3 1261 704 203 27 27 chr15 88643627 88643774 -14851200 + B1_Mur4 SINE Alu 1 147 -3 3 1261 213 114 22 43 chr15 88643774 88643820 -14851154 + C-rich Low_complexity Low_complexity 3 47 0 3 1261 852 193 14 0 chr15 88643834 88643979 -14850995 + B3 SINE B2 70 216 0 3 1261 215 301 81 61 chr15 88644035 88644134 -14850840 + B4A SINE B4 48 148 -144 3 1261 344 262 38 0 chr15 88644087 88644166 -14850808 + B1F1 SINE Alu 17 98 -51 3 1261 1084 214 5 10 chr15 88644166 88644369 -14850605 + ORR1D1 LTR MaLR 1 202 -172 3 1261 182 83 56 0 chr15 88644389 88644425 -14850549 + (TCTG)n Simple_repeat Simple_repeat 1 38 0 3 1261 239 79 0 73 chr15 88644543 88644584 -14850390 + ORR1D1 LTR MaLR 172 209 -175 3 1261 977 151 108 15 chr15 88644612 88644807 -14850167 + ORR1D1 LTR MaLR 172 384 0 3 1261 907 256 35 0 chr15 88645147 88645346 -14849628 + B3 SINE B2 1 206 -10 3 1261 204 67 0 0 chr15 88645349 88645379 -14849595 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 3 1261 351 302 0 0 chr15 88645395 88645481 -14849493 + PB1D10 SINE Alu 32 117 0 3 1261 182 37 0 36 chr15 88646214 88646242 -14848732 + (CACCC)n Simple_repeat Simple_repeat 3 29 0 3 1261 1031 225 136 15 chr15 88646796 88647170 -14847804 + MT2A LTR ERVL 1 543 -58 3 1261 685 266 65 0 chr15 88647171 88647340 -14847634 - B3A SINE B2 -18 180 1 3 1261 1732 166 51 22 chr15 88647377 88647692 -14847282 - MTD LTR MaLR -1 418 95 3 1261 237 298 40 88 chr15 88647903 88647935 -14847039 + B4A SINE B4 26 49 -243 3 1261 381 309 0 0 chr15 88647935 88648032 -14846942 + PB1D10 SINE Alu 5 101 -16 3 1261 549 237 9 17 chr15 88648032 88648148 -14846826 + ID_B1 SINE B4 50 164 -60 3 1261 1238 54 0 7 chr15 88648389 88648538 -14846436 - B1_Mus1 SINE Alu 0 148 1 3 1261 1282 41 0 0 chr15 88648642 88648789 -14846185 + B1_Mus2 SINE Alu 1 147 0 3 1261 624 168 204 24 chr15 88648889 88649088 -14845886 + B2_Mm1t SINE B2 38 210 -6 3 1261 207 120 0 74 chr15 88650266 88650320 -14844654 + G-rich Low_complexity Low_complexity 4 53 0 3 1261 356 302 55 48 chr15 88651359 88651505 -14843469 + Tigger7 DNA MER2_type 2304 2450 -41 3 1261 22 0 0 0 chr15 88651661 88651683 -14843291 + GC_rich Low_complexity Low_complexity 1 22 0 3 1261 674 171 73 8 chr15 88654602 88654726 -14840248 - B1_Mur4 SINE Alu -17 133 2 3 1261 286 239 121 89 chr15 88656144 88656268 -14838706 - MLT1B LTR MaLR -174 216 89 3 1261 230 217 0 0 chr15 88659422 88659468 -14835506 + C-rich Low_complexity Low_complexity 1 46 0 3 1261 474 101 0 0 chr15 88659764 88659833 -14835141 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 1261 428 0 0 19 chr15 88660235 88660288 -14834686 + (CACAC)n Simple_repeat Simple_repeat 1 52 0 3 1261 270 0 0 0 chr15 88662747 88662777 -14832197 + (CCA)n Simple_repeat Simple_repeat 3 32 0 3 1261 209 163 20 0 chr15 88662777 88662826 -14832148 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1261 598 262 16 0 chr15 88662842 88662964 -14832010 - B3A SINE B2 -70 128 5 3 1261 579 264 93 5 chr15 88663513 88663707 -14831267 + B3 SINE B2 3 213 -3 3 1261 225 0 0 0 chr15 88663709 88663734 -14831240 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1261 1121 82 0 27 chr15 88663756 88663906 -14831068 - B1_Mus1 SINE Alu -1 147 2 3 1261 732 200 28 35 chr15 88663939 88664084 -14830890 + B1_Mur4 SINE Alu 4 147 -3 3 1261 204 40 0 0 chr15 88664084 88664109 -14830865 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 3 1261 381 117 0 0 chr15 88664134 88664194 -14830780 + (ATGGTG)n Simple_repeat Simple_repeat 4 63 0 3 1261 1158 118 89 0 chr15 88664352 88664555 -14830419 + Lx5 LINE L1 4031 4251 -1626 3 1261 5379 149 44 14 chr15 88664543 88665729 -14829245 + Lx5 LINE L1 5394 6615 -435 3 1261 996 9 0 0 chr15 88665729 88665836 -14829138 + U6 snRNA snRNA 1 107 0 3 1261 4980 179 71 128 chr15 88665836 88666397 -14828577 + Lx5 LINE L1 6627 7057 -1 3 1261 252 0 0 0 chr15 88666452 88666480 -14828494 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 3 1261 1115 67 0 0 chr15 88666480 88666614 -14828360 - B1_Mus2 SINE Alu -13 134 1 3 1261 468 0 0 0 chr15 88667510 88667562 -14827412 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 1261 1225 70 0 9 chr15 88668820 88669035 -14825939 + (TTTCC)n Simple_repeat Simple_repeat 1 213 0 3 1261 600 111 0 0 chr15 88669037 88669127 -14825847 + (TCCCC)n Simple_repeat Simple_repeat 4 93 0 3 1261 522 259 0 8 chr15 88669165 88669282 -14825692 - RSINE1 SINE B4 -28 137 22 3 1261 1395 58 0 0 chr15 88671049 88671433 -14823541 + (CA)n Simple_repeat Simple_repeat 1 384 0 3 1261 261 167 91 58 chr15 88671587 88671708 -14823266 + RMER17A2 LTR ERVK 247 371 -535 3 1261 198 0 0 0 chr15 88671708 88671730 -14823244 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 1261 1799 185 40 20 chr15 88671790 88672192 -14822782 + RMER17C LTR ERVK 1 410 0 3 1261 450 0 0 0 chr15 88672367 88672417 -14822557 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1261 664 151 25 12 chr15 88673655 88673816 -14821158 + (TGAA)n Simple_repeat Simple_repeat 4 166 0 3 1261 243 191 63 0 chr15 88673816 88673879 -14821095 + (TGAG)n Simple_repeat Simple_repeat 1 67 0 3 1261 210 71 0 0 chr15 88674139 88674167 -14820807 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 1261 583 140 26 0 chr15 88674167 88674281 -14820693 + GA-rich Low_complexity Low_complexity 4 120 0 3 1261 321 300 92 0 chr15 88674676 88674796 -14820178 + MLT1F2 LTR MaLR 374 504 -56 3 1261 438 323 62 82 chr15 88675026 88675282 -14819692 + B4A SINE B4 1 251 -41 3 1261 252 305 51 31 chr15 88675682 88675780 -14819194 + L1M4 LINE L1 5411 5510 -668 3 1261 209 342 0 12 chr15 88675976 88676056 -14818918 + GA-rich Low_complexity Low_complexity 5 83 0 3 1261 2130 145 158 27 chr15 88676350 88676755 -14818219 + RMER6B LTR ERVK 2 459 -2 3 1261 301 250 83 9 chr15 88677012 88677121 -14817853 + L1MB3 LINE L1 6067 6183 0 3 1261 2320 128 64 24 chr15 88677260 88677636 -14817338 + Lx4A LINE L1 6668 7058 0 3 1261 389 241 0 25 chr15 88678452 88678533 -14816441 + PB1D9 SINE Alu 2 80 -40 3 1261 333 0 0 0 chr15 88679685 88679722 -14815252 + (TTG)n Simple_repeat Simple_repeat 2 38 0 3 1261 1521 55 6 0 chr15 88679722 88679904 -14815070 - B2_Mm1t SINE B2 -9 184 2 3 1261 309 51 0 0 chr15 88679928 88679967 -14815007 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1261 430 324 14 68 chr15 88679988 88680134 -14814840 - RSINE1 SINE B4 -16 149 12 3 1261 513 0 0 0 chr15 88682205 88682262 -14812712 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1261 184 333 0 0 chr15 88683000 88683051 -14811923 + MIRm SINE MIR 96 146 -130 4 1261 298 205 75 25 chr15 88684303 88684383 -14810591 + RLTR25B LTR ERVK 426 509 -519 4 1261 829 9 0 27 chr15 88684319 88684429 -14810545 + B1_Mm SINE Alu 41 147 0 4 1261 203 163 0 58 chr15 88685031 88685083 -14809891 + G-rich Low_complexity Low_complexity 4 52 0 4 1261 264 77 0 0 chr15 88686768 88686807 -14808167 + (T)n Simple_repeat Simple_repeat 1 39 0 4 1261 1194 68 0 13 chr15 88686807 88686956 -14808018 - B1_Mm SINE Alu 0 147 1 4 1261 343 200 0 0 chr15 88688885 88688945 -14806029 + (CTAGGG)n Simple_repeat Simple_repeat 1 60 0 4 1261 288 0 0 0 chr15 88689527 88689559 -14805415 + (TC)n Simple_repeat Simple_repeat 2 33 0 4 1261 486 96 0 0 chr15 88689559 88689631 -14805343 + (TG)n Simple_repeat Simple_repeat 2 74 0 4 1261 803 161 73 0 chr15 88690936 88691073 -14803901 + B1_Mus1 SINE Alu 1 147 -1 4 1261 551 225 23 0 chr15 88691115 88691244 -14803730 + B1_Mur4 SINE Alu 1 132 -18 4 1261 208 301 20 61 chr15 88691849 88691948 -14803026 - L2 LINE L2 -3139 280 186 4 1261 21 0 0 0 chr15 88692590 88692611 -14802363 + GC_rich Low_complexity Low_complexity 1 21 0 4 1261 26 0 0 0 chr15 88693652 88693678 -14801296 + GC_rich Low_complexity Low_complexity 1 26 0 4 1261 180 0 0 0 chr15 88694220 88694240 -14800734 + (CGTG)n Simple_repeat Simple_repeat 3 22 0 4 1261 248 211 42 0 chr15 88694300 88694371 -14800603 + CT-rich Low_complexity Low_complexity 1 74 0 4 1261 1023 58 72 14 chr15 88696332 88696471 -14798503 - B1_Mus1 SINE Alu -1 147 1 4 1261 401 276 92 69 chr15 88698341 88698559 -14796415 - ORR1E LTR MaLR -129 230 8 4 1261 1068 201 95 154 chr15 88699151 88699213 -14795761 + RMER10B LTR ERVL 1 60 -338 4 1261 3530 50 28 12 chr15 88699213 88699642 -14795332 - RLTR10C LTR ERVK 0 436 1 4 1261 1068 201 95 154 chr15 88699642 88700002 -14794972 + RMER10B LTR ERVL 61 398 0 4 1261 773 157 90 0 chr15 88700388 88700522 -14794452 + B1_Mur4 SINE Alu 3 148 -2 4 1261 253 132 9 276 chr15 88701661 88701707 -14793267 - MTE2b LTR MaLR 0 379 336 4 1261 1247 34 0 20 chr15 88701707 88701857 -14793117 + B1_Mus2 SINE Alu 1 147 0 4 1261 253 132 9 276 chr15 88701857 88701915 -14793059 - MTE2b LTR MaLR -44 335 303 4 1261 718 271 145 77 chr15 88702727 88702934 -14792040 - MTD LTR MaLR -14 405 198 4 1261 1433 58 31 41 chr15 88702934 88703130 -14791844 - B2_Mm2 SINE B2 -1 194 1 4 1261 718 290 86 129 chr15 88703130 88703200 -14791774 - MTD LTR MaLR -222 197 149 4 1261 1890 139 149 64 chr15 88703200 88703623 -14791351 + RMER6B LTR ERVK 1 459 -2 4 1261 718 290 86 129 chr15 88703623 88703776 -14791198 - MTD LTR MaLR -271 148 5 4 1261 392 258 0 49 chr15 88704133 88704235 -14790739 + PB1D7 SINE Alu 12 108 -12 4 1261 273 145 0 0 chr15 88704235 88704297 -14790677 + (TCTCTG)n Simple_repeat Simple_repeat 3 64 0 4 1261 306 73 0 0 chr15 88704979 88705020 -14789954 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1261 447 19 0 0 chr15 88705422 88705474 -14789500 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1261 288 221 163 0 chr15 88705480 88705566 -14789408 - RSINE1 SINE B4 -58 107 8 4 1261 295 122 61 0 chr15 88705738 88705820 -14789154 + (CAGAGA)n Simple_repeat Simple_repeat 3 89 0 4 1261 297 0 0 0 chr15 88707329 88707362 -14787612 + (T)n Simple_repeat Simple_repeat 1 33 0 4 1261 750 286 157 69 chr15 88707447 88708071 -14786903 - L1MB7 LINE L1 0 6184 5506 4 1261 207 0 0 0 chr15 88708091 88708114 -14786860 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1261 872 98 0 22 chr15 88708123 88708258 -14786716 - B2_Mm2 SINE B2 -63 132 1 4 1261 219 330 124 35 chr15 88708411 88708524 -14786450 - PB1 SINE Alu -4 123 1 4 1261 264 240 40 13 chr15 88708638 88708714 -14786260 + (TG)n Simple_repeat Simple_repeat 1 78 0 4 1261 1162 98 0 0 chr15 88708762 88708779 -14786195 - B2_Mm2 SINE B2 -21 174 158 4 1261 396 55 0 0 chr15 88708779 88708834 -14786140 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 4 1261 1162 98 0 0 chr15 88708834 88708989 -14785985 - B2_Mm2 SINE B2 -38 157 3 4 1261 1198 55 7 0 chr15 88709089 88709235 -14785739 - B1_Mus2 SINE Alu 0 147 1 4 1261 551 224 1 65 chr15 88709357 88709538 -14785436 - L1MB7 LINE L1 -1380 4766 4600 4 1261 277 308 68 0 chr15 88709551 88709741 -14785233 - L1MB7 LINE L1 -1667 4479 4273 4 1261 1238 140 50 23 chr15 88709797 88710016 -14784958 + URR1A DNA MER1_type 1 225 -1 4 1261 323 217 112 112 chr15 88710039 88710200 -14784774 + L1MD LINE L1 4459 4619 -1527 4 1261 371 300 9 26 chr15 88710230 88710343 -14784631 - RSINE1 SINE B4 -2 163 53 4 1261 354 299 61 74 chr15 88710410 88710558 -14784416 - ID_B1 SINE B4 0 224 79 4 1261 2197 116 96 0 chr15 88710635 88710980 -14783994 + ORR1C1 LTR MaLR 1 378 0 4 1261 384 280 109 23 chr15 88711007 88711135 -14783839 + B1F2 SINE Alu 8 146 -3 4 1261 587 215 0 118 chr15 88713259 88713412 -14781562 + B1_Mur3 SINE Alu 5 139 -10 4 1261 572 101 11 0 chr15 88713695 88713784 -14781190 + (TTCC)n Simple_repeat Simple_repeat 2 91 0 4 1261 189 74 0 0 chr15 88713808 88713835 -14781139 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 4 1261 605 142 91 38 chr15 88713835 88713967 -14781007 - B1_Mm SINE Alu 0 147 9 4 1261 1230 54 0 0 chr15 88714846 88714993 -14779981 + B1_Mus1 SINE Alu 2 148 0 4 1261 349 183 260 0 chr15 88715364 88715468 -14779506 + URR1A DNA MER1_type 1 131 -95 4 1261 937 45 29 22 chr15 88715489 88715625 -14779349 - B1_Mm SINE Alu 0 147 11 4 1261 453 216 60 101 chr15 88715491 88715640 -14779334 - B4 SINE B4 -69 223 81 4 1261 408 323 0 0 chr15 88715749 88715848 -14779126 + B3A SINE B2 10 108 -90 4 1261 1039 183 48 0 chr15 88716347 88716533 -14778441 + B3A SINE B2 2 196 -2 4 1261 469 15 46 0 chr15 88716620 88716685 -14778289 + (TTTC)n Simple_repeat Simple_repeat 1 68 0 4 1261 1137 61 0 39 chr15 88716685 88716838 -14778136 - B1_Mus1 SINE Alu 0 148 2 4 1261 431 254 52 14 chr15 88716968 88717119 -14777855 - B3 SINE B2 0 195 34 4 1261 555 92 0 0 chr15 88717122 88717209 -14777765 + (GA)n Simple_repeat Simple_repeat 1 87 0 4 1261 22 0 0 0 chr15 88718084 88718106 -14776868 + AT_rich Low_complexity Low_complexity 1 22 0 4 1261 409 226 99 45 chr15 88718956 88719067 -14775907 + PB1D9 SINE Alu 3 119 -1 4 1261 415 330 135 58 chr15 88720160 88720537 -14774437 - MLT1A1 LTR MaLR -2 406 1 4 1261 180 0 0 0 chr15 88720920 88720940 -14774034 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1261 288 0 0 0 chr15 88722174 88722206 -14772768 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1261 282 29 0 0 chr15 88723810 88723845 -14771129 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 1261 269 276 278 17 chr15 88723978 88724151 -14770823 - ID_B1 SINE B4 -6 218 1 4 1261 854 159 14 20 chr15 88724405 88724553 -14770421 - B1_Mur1 SINE Alu -2 147 1 4 1261 209 33 33 0 chr15 88724684 88724714 -14770260 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 4 1261 442 265 0 0 chr15 88724743 88724826 -14770148 - RSINE1 SINE B4 -15 150 68 4 1261 776 279 41 14 chr15 88725390 88725608 -14769366 + ID_B1 SINE B4 1 224 0 4 1261 1036 140 128 20 chr15 88726022 88726226 -14768748 + URR1A DNA MER1_type 1 226 0 4 1261 1079 207 124 84 chr15 88726654 88726976 -14767998 + MTD LTR MaLR 11 345 -74 4 1261 1073 83 7 7 chr15 88727077 88727223 -14767751 + B1_Mus2 SINE Alu 2 147 0 4 1261 953 133 71 29 chr15 88727236 88727406 -14767568 + B2_Mm1t SINE B2 3 179 -14 4 1261 387 105 0 0 chr15 88727511 88727568 -14767406 + (TAAA)n Simple_repeat Simple_repeat 1 57 0 4 1261 420 105 0 0 chr15 88727598 88727674 -14767300 + (GGAA)n Simple_repeat Simple_repeat 2 77 0 4 1261 315 308 112 34 chr15 88728043 88728221 -14766753 + L1M5 LINE L1 4210 4401 -1745 4 1261 378 0 0 0 chr15 88728309 88728351 -14766623 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1261 326 248 160 19 chr15 88728736 88728892 -14766082 + L1M5 LINE L1 4554 4731 -1415 4 1261 286 100 33 0 chr15 88729005 88729065 -14765909 + (TTTTTG)n Simple_repeat Simple_repeat 3 64 0 4 1261 657 288 72 56 chr15 88729067 88729317 -14765657 - B4A SINE B4 -38 254 1 4 1261 453 238 46 28 chr15 88729334 88729442 -14765532 - PB1D10 SINE Alu -6 111 2 4 1261 1095 51 43 14 chr15 88729495 88729633 -14765341 - B1_Mm SINE Alu -5 142 1 4 1261 324 295 42 114 chr15 88729727 88729949 -14765025 + L1M5 LINE L1 4994 5179 -967 4 1261 369 0 0 0 chr15 88729949 88729990 -14764984 + (GGAA)n Simple_repeat Simple_repeat 4 44 0 4 1261 324 292 42 124 chr15 88729990 88730140 -14764834 + L1M5 LINE L1 5180 5335 -811 4 1261 249 276 44 33 chr15 88730176 88730266 -14764708 + ORR1E LTR MaLR 2 92 -287 4 1261 251 255 0 0 chr15 88730326 88730373 -14764601 - ID_B1 SINE B4 -3 221 175 4 1261 216 242 71 57 chr15 88730373 88730396 -14764578 - PB1 SINE Alu -2 125 55 4 1261 440 272 105 52 chr15 88730466 88730714 -14764260 + ORR1E LTR MaLR 87 347 -12 4 1261 234 211 69 14 chr15 88730821 88730893 -14764081 + L1M5 LINE L1 5549 5624 -560 4 1261 543 281 99 38 chr15 88732592 88732803 -14762171 + LTR40c LTR ERVL 22 245 -220 4 1261 231 297 63 42 chr15 88732782 88732877 -14762097 + LTR40c LTR ERVL 350 446 -73 4 1261 462 240 94 82 chr15 88734510 88734669 -14760305 - MER58C DNA MER1_type -42 173 13 4 1261 789 217 0 0 chr15 88735328 88735508 -14759466 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 1261 552 56 0 0 chr15 88735508 88735580 -14759394 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 1262 744 224 122 136 chr15 88735871 88736150 -14758824 + B4A SINE B4 8 282 -10 4 1262 359 98 16 0 chr15 88736166 88736227 -14758747 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 1262 302 222 0 89 chr15 88736285 88736364 -14758610 + L1M5 LINE L1 5230 5301 -845 4 1262 674 245 7 13 chr15 88736401 88736550 -14758424 + B1_Mur1 SINE Alu 1 148 -1 4 1262 356 21 42 0 chr15 88736551 88736599 -14758375 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 4 1262 711 181 206 17 chr15 88736609 88736789 -14758185 + B3 SINE B2 2 215 -1 4 1262 257 272 12 12 chr15 88736851 88736933 -14758041 + L1M5 LINE L1 5391 5472 -701 4 1262 900 162 0 0 chr15 88737300 88737442 -14757532 + B1_Mur2 SINE Alu 2 143 -6 4 1262 232 204 0 0 chr15 88737743 88737787 -14757187 + L1M5 LINE L1 4956 4999 -1147 4 1262 767 61 9 0 chr15 88737823 88737937 -14757037 + (TCTA)n Simple_repeat Simple_repeat 4 118 0 5 1262 916 219 10 44 chr15 88737938 88738151 -14756823 - B3A SINE B2 -6 210 1 5 1262 22 35 0 0 chr15 88738208 88738237 -14756737 + AT_rich Low_complexity Low_complexity 1 29 0 5 1262 994 119 0 0 chr15 88738289 88738432 -14756542 + B1_Mus1 SINE Alu 6 148 0 5 1262 244 276 217 9 chr15 88738493 88738599 -14756375 + ID_B1 SINE B4 13 140 -84 5 1262 309 294 98 61 chr15 88738786 88738807 -14756167 - B4A SINE B4 -52 240 147 5 1262 780 164 62 0 chr15 88738807 88738935 -14756039 - B1_Mur2 SINE Alu -5 144 9 5 1262 309 294 98 61 chr15 88738935 88738949 -14756025 - B4A SINE B4 -52 146 72 5 1262 422 291 60 0 chr15 88739075 88739192 -14755782 + RSINE1 SINE B4 35 158 -7 5 1262 294 95 0 0 chr15 88739290 88739332 -14755642 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1262 244 246 77 0 chr15 88739427 88739492 -14755482 + ID2 SINE ID 2 71 -12 5 1262 1114 231 175 13 chr15 88739472 88739538 -14755436 + MTD LTR MaLR 7 110 -309 5 1262 348 24 0 0 chr15 88739538 88739579 -14755395 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1262 1114 231 175 13 chr15 88739579 88739815 -14755159 + MTD LTR MaLR 111 357 -62 5 1262 616 299 5 70 chr15 88739846 88739903 -14755071 + ID_B1 SINE B4 37 224 0 5 1262 990 133 0 7 chr15 88739903 88740047 -14754927 + B1_Mur4 SINE Alu 8 150 0 5 1262 334 267 27 0 chr15 88740161 88740236 -14754738 + L1M5 LINE L1 4127 4203 -1943 5 1262 1136 112 67 6 chr15 88740472 88740652 -14754322 + B2_Mm2 SINE B2 1 191 -4 5 1262 279 0 0 0 chr15 88740961 88740992 -14753982 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 1262 800 171 0 0 chr15 88741427 88741550 -14753424 + RSINE1 SINE B4 2 124 -41 5 1262 1260 87 0 2 chr15 88741555 88742010 -14752964 + (CA)n Simple_repeat Simple_repeat 1 453 0 5 1262 812 206 137 11 chr15 88742062 88742215 -14752759 + B3 SINE B2 2 153 -63 5 1262 416 67 0 16 chr15 88742215 88742276 -14752698 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 1262 812 206 137 11 chr15 88742276 88742304 -14752670 + B3 SINE B2 154 205 -11 5 1262 303 340 47 0 chr15 88742324 88742430 -14752544 + L1MD LINE L1 4474 4584 -1562 5 1262 324 329 48 41 chr15 88742859 88743005 -14751969 + L1M5 LINE L1 5089 5235 -911 5 1262 237 288 99 64 chr15 88743330 88743501 -14751473 + MLT1C LTR MaLR 34 210 -257 5 1262 712 176 73 53 chr15 88748842 88748992 -14745982 + B3 SINE B2 64 216 0 5 1262 334 349 63 31 chr15 88749022 88749244 -14745730 + L1M5 LINE L1 2861 3089 -3057 5 1262 352 366 14 0 chr15 88749302 88749444 -14745530 + (CA)n Simple_repeat Simple_repeat 2 145 0 5 1262 222 143 0 0 chr15 88749688 88749737 -14745237 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1262 244 283 19 0 chr15 88750305 88750358 -14744616 + PB1D9 SINE Alu 1 54 -66 5 1262 309 256 0 56 chr15 88750401 88750579 -14744395 + G-rich Low_complexity Low_complexity 2 169 0 5 1262 446 200 9 37 chr15 88750580 88750689 -14744285 + B1_Mur2 SINE Alu 42 147 -2 5 1262 189 228 17 50 chr15 88751340 88751400 -14743574 + L3 LINE CR1 4320 4377 -112 5 1262 302 228 275 30 chr15 88752549 88752716 -14742258 - L1M5 LINE L1 -534 5639 5432 5 1262 233 188 0 111 chr15 88752745 88752799 -14742175 - ID_B1 SINE B4 -3 221 174 5 1262 313 228 18 0 chr15 88752754 88752811 -14742163 - PB1D10 SINE Alu -8 109 52 5 1262 552 226 0 0 chr15 88752939 88753041 -14741933 - ID_B1 SINE B4 -3 221 120 5 1262 355 304 10 10 chr15 88753244 88753347 -14741627 - ID_B1 SINE B4 -101 123 21 5 1262 1321 20 0 0 chr15 88753522 88753669 -14741305 - B1_Mus2 SINE Alu 0 147 1 5 1262 543 271 108 33 chr15 88753999 88754465 -14740509 + L1MEg LINE L1 1076 1554 -4646 5 1262 621 260 5 63 chr15 88754655 88754844 -14740130 + B3A SINE B2 5 182 -16 5 1262 460 290 24 0 chr15 88755071 88755195 -14739779 - B1F SINE Alu -13 136 10 5 1262 188 238 0 16 chr15 88755195 88755259 -14739715 + GA-rich Low_complexity Low_complexity 2 64 0 5 1262 468 277 181 9 chr15 88756838 88757053 -14737921 + L1MC2 LINE L1 2 253 -6255 5 1262 309 291 32 79 chr15 88757144 88757360 -14737614 + L1MC2 LINE L1 2212 2417 -4091 5 1262 912 201 119 5 chr15 88757357 88757567 -14737407 + Lx5 LINE L1 6774 7007 -43 5 1262 256 0 50 25 chr15 88757587 88757627 -14737347 + (TTAA)n Simple_repeat Simple_repeat 1 41 0 5 1262 846 232 74 53 chr15 88757628 88757682 -14737292 + L1MC2 LINE L1 2409 2461 -3860 5 1262 966 149 0 0 chr15 88757682 88757823 -14737151 + B1_Mus2 SINE Alu 1 141 -6 5 1262 474 65 0 0 chr15 88757825 88757887 -14737087 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 5 1262 846 232 74 53 chr15 88757887 88758166 -14736808 + L1MC2 LINE L1 2462 2752 -3569 5 1262 274 308 53 84 chr15 88758166 88758297 -14736677 + PB1 SINE Alu 1 127 0 5 1262 321 255 199 14 chr15 88758455 88758551 -14736423 + L1MC2 LINE L1 2737 2835 -3486 5 1262 2132 141 137 5 chr15 88758551 88758923 -14736051 + MTC LTR MaLR 1 421 0 5 1262 321 255 199 14 chr15 88758923 88759037 -14735937 + L1MC2 LINE L1 2836 2986 -3335 5 1262 358 237 0 26 chr15 88759041 88759119 -14735855 + B1_Mur2 SINE Alu 67 142 -7 5 1262 667 215 189 8 chr15 88759135 88759277 -14735697 + L1MC2 LINE L1 3060 3227 -3094 5 1262 1490 74 0 5 chr15 88759277 88759467 -14735507 + B2_Mm2 SINE B2 2 190 -5 5 1262 667 215 189 8 chr15 88759467 88759694 -14735280 + L1MC2 LINE L1 3228 3495 -2826 5 1262 333 273 248 14 chr15 88759695 88759836 -14735138 + L1MC2 LINE L1 4271 4444 -1877 5 1262 467 273 186 32 chr15 88759866 88759912 -14735062 + L1MC2 LINE L1 4517 4572 -1749 5 1262 405 0 0 0 chr15 88759912 88759957 -14735017 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1262 261 0 0 0 chr15 88759957 88759985 -14734989 + (GA)n Simple_repeat Simple_repeat 1 29 0 5 1262 782 159 24 0 chr15 88759985 88760111 -14734863 - B1_Mus1 SINE Alu -19 129 1 5 1262 467 273 186 32 chr15 88760111 88760557 -14734417 + L1MC2 LINE L1 4573 5084 -1237 5 1262 563 264 31 52 chr15 88760640 88760808 -14734166 + B3A SINE B2 1 160 -38 5 1262 474 49 0 0 chr15 88760808 88760869 -14734105 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1262 353 265 57 142 chr15 88760869 88760911 -14734063 + B2_Mm1a SINE B2 151 193 0 5 1262 629 256 120 39 chr15 88760916 88761407 -14733567 + L1MC2 LINE L1 5120 5633 -886 5 1262 376 287 162 10 chr15 88761903 88762206 -14732768 + L1MC2 LINE L1 5808 6156 -363 5 1262 266 273 51 13 chr15 88762325 88762403 -14732571 + MER57E2 LTR ERV1 321 401 -1 5 1262 296 289 12 0 chr15 88762420 88762503 -14732471 + L1MC2 LINE L1 6412 6495 -13 5 1262 270 56 0 0 chr15 88762504 88762540 -14732434 + (AGGGGG)n Simple_repeat Simple_repeat 6 41 0 5 1262 702 0 0 0 chr15 88762540 88762618 -14732356 + (GAA)n Simple_repeat Simple_repeat 1 78 0 5 1262 2150 82 50 48 chr15 88766006 88766363 -14728611 + Lx LINE L1 6295 6652 -2 5 1262 399 145 0 0 chr15 88766709 88766778 -14728196 + (TG)n Simple_repeat Simple_repeat 1 69 0 5 1262 1764 152 172 46 chr15 88767071 88767443 -14727531 + MTD LTR MaLR 1 419 0 5 1262 263 321 122 52 chr15 88767789 88768019 -14726955 + MLT1A1 LTR MaLR 155 400 -8 5 1262 345 248 78 11 chr15 88768262 88768412 -14726562 + MLT1E3 LTR MaLR 102 299 -381 5 1262 3150 14 3 0 chr15 88768660 88769005 -14725969 + ORR1A0 LTR MaLR 1 346 0 5 1262 485 160 32 18 chr15 88769574 88769695 -14725279 - PB1D9 SINE Alu -23 126 2 5 1262 319 241 73 37 chr15 88769635 88769717 -14725257 - ID_B1 SINE B4 -82 142 58 5 1262 350 185 12 0 chr15 88770357 88770438 -14724536 + (CA)n Simple_repeat Simple_repeat 1 82 0 5 1262 2154 139 6 15 chr15 88770515 88770844 -14724130 + ORR1B2 LTR MaLR 1 326 -41 5 1262 438 99 328 0 chr15 88770887 88770991 -14723983 + B2_Mm2 SINE B2 46 189 -6 5 1262 403 103 0 0 chr15 88770977 88771042 -14723932 + ORR1B2 LTR MaLR 314 394 0 5 1262 1115 259 38 8 chr15 88771042 88771299 -14723675 + B4 SINE B4 28 292 0 5 1262 216 216 0 0 chr15 88771299 88771350 -14723624 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1262 415 295 90 17 chr15 88771943 88772233 -14722741 + L1M5 LINE L1 2734 3044 -3102 5 1262 1017 79 49 21 chr15 88772234 88772376 -14722598 + B1_Mm SINE Alu 1 146 -1 5 1262 322 302 63 21 chr15 88772425 88772567 -14722407 + B1F SINE Alu 1 148 -1 5 1262 230 0 33 0 chr15 88772569 88772599 -14722375 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 5 1262 889 183 193 6 chr15 88772720 88772901 -14722073 - B3 SINE B2 0 216 2 5 1262 462 214 227 25 chr15 88773005 88773168 -14721806 + B3A SINE B2 3 198 0 5 1262 1004 256 96 60 chr15 88773335 88773772 -14721202 + RMER5 LTR ERV1 70 522 -12 5 1262 267 250 0 0 chr15 88773792 88773852 -14721122 + L1M5 LINE L1 3360 3419 -2727 5 1262 491 237 149 14 chr15 88774331 88774472 -14720502 + B3A SINE B2 1 160 -38 5 1262 345 62 0 0 chr15 88774476 88774524 -14720450 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1262 1205 235 82 128 chr15 88774656 88775046 -14719928 - MTE2b LTR MaLR -5 374 3 5 1262 670 291 27 38 chr15 88775169 88775355 -14719619 + B4A SINE B4 3 186 -106 5 1262 4636 218 52 43 chr15 88775360 88777072 -14717902 + Lx4B LINE L1 5331 7019 -39 5 1262 357 24 0 0 chr15 88777106 88777148 -14717826 + (CAAT)n Simple_repeat Simple_repeat 2 43 0 5 1262 1317 232 239 11 chr15 88777160 88777609 -14717365 + MTEa-int LTR MaLR 243 786 -472 5 1262 1637 246 61 48 chr15 88777642 88778098 -14716876 + Lx6 LINE L1 6943 7404 -56 5 1262 568 194 39 39 chr15 88778623 88778752 -14716222 + B3 SINE B2 79 207 -9 5 1262 385 280 125 13 chr15 88778752 88778904 -14716070 + Lx8 LINE L1 6823 6991 -482 5 1262 313 311 149 43 chr15 88778987 88779269 -14715705 + Lx8 LINE L1 7155 7466 -7 5 1262 420 221 22 29 chr15 88779638 88779778 -14715196 + MTEa LTR MaLR 211 367 -12 5 1262 459 304 59 32 chr15 88779876 88780063 -14714911 + L1MC LINE L1 2898 3089 -3057 5 1262 576 0 0 0 chr15 88780081 88780145 -14714829 + (GGAAA)n Simple_repeat Simple_repeat 5 68 0 5 1262 1304 89 22 0 chr15 88780185 88780365 -14714609 + B2_Mm2 SINE B2 2 185 -10 5 1262 378 42 0 0 chr15 88780367 88780415 -14714559 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 1262 234 343 27 18 chr15 88780471 88780581 -14714393 + BC1_Mm scRNA scRNA 4 114 -38 5 1262 466 305 111 40 chr15 88780585 88781222 -14713752 + L1MC LINE L1 3224 3922 -2224 5 1262 446 254 163 8 chr15 88781266 88781389 -14713585 + B3A SINE B2 1 142 -56 5 1262 779 106 0 7 chr15 88781390 88781533 -14713441 + (CA)n Simple_repeat Simple_repeat 2 143 0 5 1262 379 208 0 25 chr15 88781542 88781621 -14713353 - PB1D9 SINE Alu -1 119 43 5 1262 756 268 93 54 chr15 88781630 88781962 -14713012 + RLTR15 LTR ERVK 1 345 -14 5 1262 2608 61 0 0 chr15 88781979 88782290 -14712684 + RLTR10E LTR ERVK 1 311 0 5 1262 315 0 0 0 chr15 88782312 88782347 -14712627 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1262 226 287 76 34 chr15 88782347 88782466 -14712508 + L1MC LINE L1 4356 4479 -1667 5 1262 213 200 0 39 chr15 88782563 88782615 -14712359 + (TATG)n Simple_repeat Simple_repeat 2 51 0 5 1262 285 341 104 16 chr15 88783059 88783073 -14711901 + B4 SINE B4 68 92 -200 5 1262 545 264 25 0 chr15 88783073 88783194 -14711780 + B1_Mur1 SINE Alu 2 125 -24 6 1262 770 188 0 8 chr15 88783189 88783318 -14711656 + B1_Mur2 SINE Alu 13 140 -9 6 1262 894 156 0 0 chr15 88783330 88783465 -14711509 + B1_Mus2 SINE Alu 11 145 -2 6 1262 774 138 13 58 chr15 88783834 88783988 -14710986 - B1_Mur3 SINE Alu -1 148 2 6 1262 201 158 26 0 chr15 88784203 88784241 -14710733 + C-rich Low_complexity Low_complexity 3 41 0 6 1262 589 136 374 6 chr15 88785962 88786125 -14708849 + URR1B DNA MER1_type 2 224 -1 6 1262 207 69 0 0 chr15 88788611 88788640 -14706334 + (CAG)n Simple_repeat Simple_repeat 2 30 0 6 1262 527 267 0 0 chr15 88789298 88789403 -14705571 + PB1D10 SINE Alu 6 110 -7 6 1262 953 254 4 84 chr15 88789420 88789682 -14705292 - Lx5 LINE L1 -11 7039 6799 6 1262 202 238 85 106 chr15 88790115 88790209 -14704765 - MER5A DNA MER1_type -6 183 92 6 1262 501 127 0 0 chr15 88790648 88790727 -14704247 + (CA)n Simple_repeat Simple_repeat 1 79 0 6 1262 866 148 0 15 chr15 88790727 88790864 -14704110 + B1_Mur3 SINE Alu 2 136 -13 6 1262 219 88 0 0 chr15 88790864 88790898 -14704076 + (CAA)n Simple_repeat Simple_repeat 1 34 0 6 1262 1379 6 0 0 chr15 88791218 88791376 -14703598 + L1Md_A LINE L1 6425 6582 0 6 1262 249 33 0 0 chr15 88792393 88792423 -14702551 + (A)n Simple_repeat Simple_repeat 1 30 0 6 1262 2171 109 59 18 chr15 88795177 88795514 -14699460 + ORR1B1 LTR MaLR 42 392 -2 6 1262 252 122 0 0 chr15 88795671 88795712 -14699262 + (CAA)n Simple_repeat Simple_repeat 1 41 0 6 1262 219 270 87 81 chr15 88796160 88796220 -14698754 + ID SINE ID 15 75 -149 6 1262 355 238 39 43 chr15 88796220 88796343 -14698631 + PB1D10 SINE Alu 1 120 0 6 1262 2437 59 6 9 chr15 88797046 88797369 -14697605 + L1Md_F2 LINE L1 6250 6571 -11 6 1262 653 36 12 0 chr15 88797423 88797507 -14697467 + (TC)n Simple_repeat Simple_repeat 2 86 0 6 1262 868 138 0 37 chr15 88797605 88797740 -14697234 + B1_Mur4 SINE Alu 18 147 -3 6 1262 700 243 7 14 chr15 88797794 88797936 -14697038 - RSINE1 SINE B4 -23 142 2 6 1262 743 297 77 83 chr15 88798056 88798523 -14696451 + RMER5 LTR ERV1 43 506 -28 6 1262 234 365 0 0 chr15 88798823 88798897 -14696077 - ID4_ SINE ID -8 75 2 6 1262 437 216 0 85 chr15 88798897 88799003 -14695971 - PB1D10 SINE Alu -6 111 15 6 1262 319 313 10 29 chr15 88798917 88799019 -14695955 - ID_B1 SINE B4 -46 178 79 6 1262 327 295 36 0 chr15 88799061 88799173 -14695801 + L1M5 LINE L1 2463 2578 -3568 6 1262 397 152 42 118 chr15 88799178 88799195 -14695779 + MT2B LTR ERVL 151 158 -443 6 1262 627 171 40 71 chr15 88799195 88799321 -14695653 + B1_Mur2 SINE Alu 1 122 -27 6 1262 368 179 13 0 chr15 88799321 88799399 -14695575 + (CA)n Simple_repeat Simple_repeat 1 79 0 6 1262 273 360 25 34 chr15 88799438 88799556 -14695418 + MER74A LTR ERVL 1 117 -441 6 1262 837 322 102 0 chr15 88799593 88799916 -14695058 + MER74A LTR ERVL 203 558 0 6 1262 1247 141 14 28 chr15 88801911 88802122 -14692852 + URR1B DNA MER1_type 18 225 0 6 1262 2022 210 25 38 chr15 88802125 88802570 -14692404 - MT2A LTR ERVL -19 514 76 6 1262 786 199 72 72 chr15 88802573 88802768 -14692206 + B3 SINE B2 1 195 0 6 1262 573 110 59 10 chr15 88802749 88802850 -14692124 - MT2A LTR ERVL -427 106 1 6 1262 828 203 153 16 chr15 88803419 88803609 -14691365 - B3 SINE B2 0 216 1 6 1262 427 238 0 0 chr15 88803921 88804005 -14690969 + B3 SINE B2 126 209 -7 6 1262 207 0 0 0 chr15 88804071 88804094 -14690880 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1262 664 252 0 7 chr15 88804095 88804235 -14690739 - ID_B1 SINE B4 -10 214 76 6 1262 299 277 30 50 chr15 88804450 88804549 -14690425 + MER104 DNA Tc2 83 175 -6 6 1262 239 284 60 22 chr15 88804516 88804624 -14690350 + MER104 DNA Tc2 67 181 0 6 1262 252 269 38 13 chr15 88805295 88805374 -14689600 + ID2 SINE ID 2 82 -1 6 1262 279 265 50 75 chr15 88807839 88808039 -14686935 + ORR1B1-int LTR MaLR 560 754 -755 6 1262 1007 95 0 0 chr15 88807936 88808073 -14686901 + B1_Mus1 SINE Alu 6 142 -6 6 1262 231 167 0 0 chr15 88808077 88808119 -14686855 + A-rich Low_complexity Low_complexity 1 42 0 6 1262 281 207 3 0 chr15 88808588 88808640 -14686334 - B1F SINE Alu -5 144 73 6 1262 207 0 0 0 chr15 88809620 88809643 -14685331 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 6 1262 1147 156 17 121 chr15 88809780 88810020 -14684954 + B3 SINE B2 2 216 0 6 1262 186 133 0 0 chr15 88810169 88810199 -14684775 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1262 277 59 28 56 chr15 88810962 88811003 -14683971 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 6 1262 980 142 14 0 chr15 88811003 88811151 -14683823 - B1_Mur4 SINE Alu 0 150 1 6 1262 277 59 28 56 chr15 88811151 88811181 -14683793 + (TTTTTG)n Simple_repeat Simple_repeat 3 33 0 6 1262 695 178 74 0 chr15 88812348 88812483 -14682491 - B1_Mur1 SINE Alu 0 149 5 6 1262 230 219 78 20 chr15 88812638 88812749 -14682225 + L1M5 LINE L1 2945 3065 -3081 6 1262 553 257 143 0 chr15 88812749 88812924 -14682050 + ID_B1 SINE B4 8 207 -17 6 1262 252 0 0 0 chr15 88812927 88812955 -14682019 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 1262 435 175 0 85 chr15 88813965 88814071 -14680903 + URR1B DNA MER1_type 124 220 -5 6 1262 1063 119 154 40 chr15 88814377 88814578 -14680396 + URR1B DNA MER1_type 2 225 0 6 1262 2850 72 63 5 chr15 88814641 88815019 -14679955 + MTB LTR MaLR 1 400 0 6 1262 372 22 0 0 chr15 88815639 88815684 -14679290 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1262 324 0 0 0 chr15 88815684 88815719 -14679255 + (GA)n Simple_repeat Simple_repeat 1 36 0 6 1262 559 247 113 7 chr15 88815744 88815895 -14679079 - B3 SINE B2 -48 168 2 6 1262 225 0 0 0 chr15 88816268 88816293 -14678681 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 6 1262 462 142 132 7 chr15 88816448 88816544 -14678430 + B1_Mur1 SINE Alu 47 149 0 6 1262 899 81 24 0 chr15 88816651 88816774 -14678200 - B1_Mm SINE Alu -21 126 1 6 1262 1013 281 64 39 chr15 88817163 88817600 -14677374 - L1M3 LINE L1 -1767 4373 3926 6 1262 809 238 0 153 chr15 88817759 88817987 -14676987 - B3 SINE B2 -15 201 9 6 1262 316 255 210 6 chr15 88818055 88818245 -14676729 - L1M3 LINE L1 -2202 3944 3708 6 1262 341 202 179 11 chr15 88818378 88818473 -14676501 + B3A SINE B2 1 111 -87 6 1262 522 234 45 0 chr15 88818526 88818637 -14676337 - B1_Mur2 SINE Alu -1 148 33 6 1262 897 172 171 5 chr15 88819185 88819378 -14675596 - URR1B DNA MER1_type 0 225 1 6 1262 335 314 57 38 chr15 88819388 88819494 -14675480 - PB1D7 SINE Alu -1 119 12 6 1262 980 261 40 12 chr15 88820126 88820374 -14674600 + RLTR30 LTR ERV1 1 255 -124 6 1262 325 301 46 54 chr15 88820404 88820534 -14674440 + RSINE1 SINE B4 1 129 -36 6 1262 527 170 29 29 chr15 88820546 88820649 -14674325 + B1_Mur2 SINE Alu 46 148 -1 6 1262 22 0 0 0 chr15 88820655 88820677 -14674297 + AT_rich Low_complexity Low_complexity 1 22 0 6 1262 648 272 38 32 chr15 88821031 88821174 -14673800 - RCHARR1 DNA MER1_type -300 674 537 6 1262 727 200 59 0 chr15 88821174 88821309 -14673665 - B1_Mur1 SINE Alu -6 143 1 6 1262 648 272 38 32 chr15 88821309 88821351 -14673623 - RCHARR1 DNA MER1_type -438 536 488 6 1262 742 287 33 65 chr15 88821383 88821659 -14673315 + MTEa LTR MaLR 111 377 -2 6 1262 457 261 115 0 chr15 88821677 88821834 -14673140 + MTEa-int LTR MaLR 9 183 -1397 6 1262 1686 275 156 19 chr15 88821903 88823003 -14671971 + MTEa-int LTR MaLR 290 1575 -5 6 1262 982 227 169 72 chr15 88823008 88823340 -14671634 + MTEa LTR MaLR 6 369 -10 6 1262 347 173 0 148 chr15 88823471 88823559 -14671415 - B4A SINE B4 -8 284 210 6 1262 815 186 28 0 chr15 88823663 88823808 -14671166 - B1_Mur2 SINE Alu 0 149 1 6 1262 824 179 7 0 chr15 88823954 88824099 -14670875 + URR1A DNA MER1_type 81 226 0 6 1262 883 217 39 19 chr15 88824395 88824602 -14670372 + B3 SINE B2 1 211 -5 6 1262 466 292 97 0 chr15 88825593 88825737 -14669237 + RSINE1 SINE B4 4 161 -4 6 1262 471 191 45 45 chr15 88825924 88826034 -14668940 - B1_Mur2 SINE Alu -1 148 39 6 1262 418 310 7 47 chr15 88826747 88826896 -14668078 + RSINE1 SINE B4 18 160 -5 6 1262 1056 50 129 0 chr15 88827968 88828108 -14666866 - B2_Mm2 SINE B2 -37 158 1 6 1262 239 160 0 22 chr15 88828905 88828963 -14666011 - ORR1D2 LTR MaLR 0 379 323 6 1262 301 262 0 0 chr15 88828960 88829021 -14665953 - MTE2b LTR MaLR -318 61 1 6 1262 516 258 158 6 chr15 88830326 88830509 -14664465 + MIR SINE MIR 52 262 0 6 1262 935 168 148 0 chr15 88830720 88830916 -14664058 - URR1A DNA MER1_type -1 225 1 6 1262 998 113 7 7 chr15 88831107 88831250 -14663724 - B1_Mus2 SINE Alu -2 145 3 6 1262 230 109 0 42 chr15 88831483 88831531 -14663443 + CT-rich Low_complexity Low_complexity 3 48 0 6 1262 1142 110 104 0 chr15 88831536 88831709 -14663265 - B2_Mm2 SINE B2 -4 191 1 6 1262 638 292 187 29 chr15 88831721 88832262 -14662712 - L1MA4 LINE L1 -425 5875 5264 6 1262 944 120 35 7 chr15 88832262 88832405 -14662569 - B1_Mus1 SINE Alu -1 147 1 6 1262 494 291 122 75 chr15 88832405 88832824 -14662150 - L1MA4 LINE L1 -880 5263 4789 6 1262 271 200 30 30 chr15 88832836 88832903 -14662071 - PB1D9 SINE Alu -2 118 52 6 1262 221 291 61 37 chr15 88833144 88833226 -14661748 - B1_Mur1 SINE Alu -32 117 34 6 1262 618 242 216 21 chr15 88834057 88834302 -14660672 + B4 SINE B4 16 274 -18 6 1262 1596 178 85 13 chr15 88834569 88834887 -14660087 - MTB_Mm LTR MaLR -66 341 1 6 1262 623 261 83 97 chr15 88834888 88835096 -14659878 + B4A SINE B4 5 230 -62 6 1262 636 275 23 19 chr15 88835096 88835311 -14659663 + B3 SINE B2 1 216 0 6 1262 623 261 83 97 chr15 88835311 88835390 -14659584 + B4A SINE B4 231 288 -4 6 1262 267 31 0 0 chr15 88835418 88835450 -14659524 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1262 1073 238 112 8 chr15 88836887 88837154 -14657820 - MTD LTR MaLR -2 417 123 7 1262 357 271 115 38 chr15 88838724 88838881 -14656093 - L1M4 LINE L1 -1579 4567 4399 7 1262 598 171 68 0 chr15 88838883 88839000 -14655974 - B1_Mus2 SINE Alu 0 147 23 7 1262 704 223 0 7 chr15 88839009 88839158 -14655816 - B1_Mur1 SINE Alu 0 149 2 7 1262 315 301 121 8 chr15 88839279 88839403 -14655571 - L1M4 LINE L1 -2314 3832 3695 7 1262 393 310 6 28 chr15 88839422 88839598 -14655376 - L1M4 LINE L1 -2540 3606 3435 7 1262 479 279 24 37 chr15 88839645 88839809 -14655165 - RSINE1 SINE B4 0 165 4 7 1262 375 282 12 0 chr15 88839814 88839899 -14655075 - B3 SINE B2 -129 87 2 7 1262 446 313 63 34 chr15 88839899 88840104 -14654870 - L1M4 LINE L1 -2906 3240 3030 7 1262 511 273 66 50 chr15 88840213 88840394 -14654580 - B3A SINE B2 -14 184 1 7 1262 282 221 33 44 chr15 88841354 88841444 -14653530 - MLT1A1 LTR MaLR -2 406 318 7 1262 923 164 0 0 chr15 88842779 88842925 -14652049 + B1_Mus2 SINE Alu 1 146 -1 7 1262 799 274 14 32 chr15 88842941 88843160 -14651814 + B3 SINE B2 1 215 -1 7 1262 610 233 54 0 chr15 88843296 88843425 -14651549 + B1_Mur2 SINE Alu 13 148 -1 7 1262 262 333 46 86 chr15 88844052 88844145 -14650829 - RMER15 LTR ERVL -121 454 366 7 1262 963 0 0 0 chr15 88844145 88844252 -14650722 + (TCTCCC)n Simple_repeat Simple_repeat 1 107 0 7 1262 262 333 46 86 chr15 88844252 88844332 -14650642 - RMER15 LTR ERVL -210 365 288 7 1262 711 252 60 51 chr15 88844390 88844624 -14650350 - Lx8 LINE L1 -450 7023 6788 7 1262 443 257 195 59 chr15 88844634 88844870 -14650104 + B4 SINE B4 7 274 -18 7 1262 909 222 61 0 chr15 88845369 88845567 -14649407 + B3 SINE B2 1 210 -6 7 1262 236 319 43 14 chr15 88845610 88845680 -14649294 + ID4_ SINE ID 2 73 -10 7 1262 310 261 216 47 chr15 88845697 88845910 -14649064 + L1MEc LINE L1 109 357 -6043 7 1262 257 372 0 0 chr15 88846139 88846217 -14648757 - B1F1 SINE Alu -65 84 7 7 1262 1151 55 7 7 chr15 88846619 88846766 -14648208 - B1_Mus2 SINE Alu 0 147 1 7 1262 423 0 0 0 chr15 88846784 88846831 -14648143 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1262 894 275 116 60 chr15 88847202 88847632 -14647342 + MLT2B4 LTR ERVL 1 454 -102 7 1262 333 265 85 38 chr15 88848944 88849050 -14645924 - PB1 SINE Alu -15 112 2 7 1262 541 266 136 30 chr15 88849051 88849276 -14645698 + L1M2 LINE L1 5332 5587 -710 7 1262 957 144 201 0 chr15 88849276 88849450 -14645524 + B3 SINE B2 2 210 -6 7 1262 541 276 189 52 chr15 88849450 88849650 -14645324 + L1M2 LINE L1 5588 5818 -479 7 1262 1258 70 32 0 chr15 88849650 88849808 -14645166 + U1 snRNA snRNA 1 163 -2 7 1262 1240 52 0 0 chr15 88850273 88850422 -14644552 + B2_Mm2 SINE B2 1 149 -46 7 1262 207 0 0 0 chr15 88850422 88850445 -14644529 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 7 1262 30 0 0 0 chr15 88852152 88852182 -14642792 + AT_rich Low_complexity Low_complexity 1 30 0 7 1262 243 103 0 0 chr15 88852222 88852261 -14642713 + (TAGTG)n Simple_repeat Simple_repeat 2 40 0 7 1262 505 226 96 0 chr15 88853462 88853577 -14641397 - RSINE1 SINE B4 -38 127 2 7 1262 235 300 14 14 chr15 88853622 88853693 -14641281 - MER3 DNA MER1_type -82 127 57 7 1262 888 248 103 61 chr15 88856134 88856444 -14638530 - MTEa LTR MaLR -19 360 38 7 1262 411 294 29 29 chr15 88857418 88857523 -14637451 + B3A SINE B2 2 106 -92 7 1262 254 348 82 34 chr15 88857429 88857575 -14637399 + RSINE1 SINE B4 11 163 -2 7 1262 304 261 42 42 chr15 88858259 88858355 -14636619 + L1MC LINE L1 4519 4614 -1532 7 1262 836 124 13 70 chr15 88858357 88858513 -14636461 + B1_Mus1 SINE Alu 2 148 0 7 1262 220 286 95 0 chr15 88858702 88858765 -14636209 + ID4_ SINE ID 9 77 -6 7 1262 936 156 0 0 chr15 88858813 88858993 -14635981 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1262 748 212 15 0 chr15 88859066 88859203 -14635771 - B1_Mur3 SINE Alu -6 143 5 7 1262 776 292 9 0 chr15 88859457 88859669 -14635305 - ID_B1 SINE B4 -8 216 3 7 1262 221 269 19 0 chr15 88859694 88859746 -14635228 - B4A SINE B4 -157 135 83 7 1262 769 319 103 0 chr15 88859739 88860059 -14634915 - MER54A LTR ERVL -548 353 1 7 1262 1309 97 16 5 chr15 88860083 88860269 -14634705 - B2_Mm2 SINE B2 -7 188 1 7 1262 1956 219 106 30 chr15 88860878 88861586 -14633388 - Lx9 LINE L1 -5 7639 6844 7 1262 739 217 22 0 chr15 88861588 88861726 -14633248 - Lx9 LINE L1 -1064 6580 6440 7 1262 21 0 0 0 chr15 88861733 88861754 -14633220 + AT_rich Low_complexity Low_complexity 1 21 0 7 1262 324 48 0 0 chr15 88861850 88861892 -14633082 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1262 361 319 11 0 chr15 88861905 88861999 -14632975 - ID_B1 SINE B4 -45 179 85 7 1262 451 56 28 0 chr15 88862110 88862181 -14632793 + (TTGG)n Simple_repeat Simple_repeat 3 75 0 7 1262 263 256 110 89 chr15 88862181 88862318 -14632656 - B1F2 SINE Alu -8 141 1 7 1262 1475 43 0 26 chr15 88862415 88862607 -14632367 - B2_Mm2 SINE B2 0 195 9 7 1262 745 188 7 14 chr15 88862637 88862783 -14632191 - B1_Mur2 SINE Alu -3 146 2 7 1262 780 61 0 0 chr15 88862902 88863001 -14631973 - B2_Mm2 SINE B2 -96 99 1 7 1262 1143 95 0 0 chr15 88863031 88863179 -14631795 + B1_Mus1 SINE Alu 1 148 0 7 1262 20540 87 8 7 chr15 88863180 88866798 -14628176 + L1Md_F2 LINE L1 207 3827 -2056 7 157 3352 83 6 37 chr15 88866798 88867288 -14627686 - IAPLTR2_Mm LTR ERVK 0 475 1 7 1263 15570 40 5 3 chr15 88867288 88869110 -14625864 - IAPEz-int LTR ERVK 0 6481 4656 7 1263 1883 98 0 0 chr15 88869109 88869355 -14625619 - IAPEz-int LTR ERVK -5183 2497 2252 7 1263 985 67 0 0 chr15 88869356 88869475 -14625499 - IAPEz-int LTR ERVK -5004 1477 1359 7 1263 3561 52 17 31 chr15 88869475 88870190 -14624784 - IAPEz-int LTR ERVK -5819 662 35 7 1263 3374 81 6 37 chr15 88870200 88870690 -14624284 - IAPLTR2_Mm LTR ERVK 0 475 1 7 1263 13915 50 14 1 chr15 88870690 88872432 -14622542 + L1Md_F2 LINE L1 3822 5585 -298 7 1263 8347 39 5 1 chr15 88872433 88873425 -14621549 + L1Md_F2 LINE L1 5587 6582 0 7 1263 541 315 7 14 chr15 88873444 88873589 -14621385 + B3 SINE B2 27 170 -46 7 1263 672 157 66 8 chr15 88873732 88873854 -14621120 + B3 SINE B2 2 130 -86 7 1263 252 224 0 65 chr15 88873975 88874037 -14620937 - PB1D9 SINE Alu -2 118 61 7 1263 815 226 150 19 chr15 88874090 88874389 -14620585 - L1MB2 LINE L1 -13 6158 5813 7 1263 609 207 13 135 chr15 88874420 88874576 -14620398 - B1_Mur1 SINE Alu -12 137 1 7 1263 357 322 16 32 chr15 88874576 88874699 -14620275 - B4A SINE B4 -101 191 71 7 1263 733 244 119 0 chr15 88874892 88875068 -14619906 + B3A SINE B2 2 198 0 7 1263 1102 56 35 14 chr15 88875086 88875230 -14619744 + B1_Mm SINE Alu 1 147 0 7 1263 749 228 106 45 chr15 88875251 88875430 -14619544 + B3 SINE B2 2 191 -25 7 1263 720 228 0 7 chr15 88876039 88876185 -14618789 - B1_Mur2 SINE Alu -3 146 2 7 1263 634 265 29 0 chr15 88876247 88876383 -14618591 + B1_Mur1 SINE Alu 2 141 -8 7 1263 471 215 231 0 chr15 88876394 88876515 -14618459 + B1_Mur1 SINE Alu 1 149 0 7 1263 1845 240 96 38 chr15 88876645 88877177 -14617797 - RLTR20B1 LTR ERVK 0 563 1 7 1263 363 190 38 12 chr15 88877668 88877748 -14617226 + PB1D9 SINE Alu 37 118 -2 7 1263 485 309 24 8 chr15 88877769 88877896 -14617078 + B1F SINE Alu 6 134 -15 7 1263 415 183 0 64 chr15 88877933 88878073 -14616901 + G-rich Low_complexity Low_complexity 5 135 0 7 1263 1542 251 44 14 chr15 88878619 88878979 -14615995 - Lx6 LINE L1 -1 7459 7089 7 1263 4046 149 34 30 chr15 88878977 88879743 -14615231 + L1_Mur2 LINE L1 1967 2735 -3142 7 1263 1149 79 0 0 chr15 88879743 88879882 -14615092 + B1_Mus2 SINE Alu 1 139 -8 7 1263 3828 159 86 55 chr15 88879891 88880359 -14614615 + L1_Mur2 LINE L1 2994 3477 -2403 7 1263 1252 63 103 0 chr15 88880359 88880534 -14614440 + B2_Mm2 SINE B2 3 195 0 7 1263 3828 159 86 55 chr15 88880534 88880937 -14614037 + L1_Mur2 LINE L1 3478 3891 -1989 7 1263 456 215 271 18 chr15 88881233 88881399 -14613575 - B3 SINE B2 -5 211 4 7 1263 479 309 24 0 chr15 88881404 88881530 -14613444 - B1F SINE Alu -4 145 17 7 1263 283 232 43 0 chr15 88881551 88881620 -14613354 - ID4 SINE ID -10 73 2 7 1263 995 254 5 14 chr15 88881665 88881881 -14613093 - B3 SINE B2 -1 215 2 7 1263 405 207 338 34 chr15 88882198 88882375 -14612599 - ORR1D1 LTR MaLR 0 370 140 7 1263 517 294 73 11 chr15 88883044 88883223 -14611751 - ORR1E-int LTR MaLR -1377 203 14 7 1263 589 292 86 80 chr15 88883232 88883545 -14611429 - ORR1E LTR MaLR -10 349 35 7 1263 1137 48 0 20 chr15 88883577 88883726 -14611248 + B1_Mus2 SINE Alu 2 147 0 7 1263 714 157 0 0 chr15 88884179 88884287 -14610687 + B1_Mur2 SINE Alu 41 148 -1 7 1263 666 213 200 6 chr15 88887041 88887216 -14607758 - B3 SINE B2 -5 211 3 7 1263 602 216 216 28 chr15 88887245 88887426 -14607548 - B3 SINE B2 0 216 2 7 1263 1488 289 159 11 chr15 88887947 88888023 -14606951 - Lx8 LINE L1 -576 6897 6820 7 1263 1105 75 13 40 chr15 88888023 88888175 -14606799 + B1_Mus1 SINE Alu 1 148 0 7 1263 1488 289 159 11 chr15 88888175 88888708 -14606266 - Lx8 LINE L1 -654 6819 6198 7 1263 382 229 48 0 chr15 88888721 88888804 -14606170 - B3 SINE B2 0 216 130 7 1263 395 288 132 7 chr15 88888854 88888986 -14605988 + B3 SINE B2 51 193 -5 7 1263 25 0 0 0 chr15 88890074 88890099 -14604875 + AT_rich Low_complexity Low_complexity 1 25 0 7 1263 32 106 0 0 chr15 88890185 88890308 -14604666 + GC_rich Low_complexity Low_complexity 1 123 0 7 1263 274 274 25 31 chr15 88890340 88890502 -14604472 + C-rich Low_complexity Low_complexity 2 162 0 7 1263 353 337 84 45 chr15 88891946 88892164 -14602810 - MLT1D LTR MaLR -27 440 165 7 1263 333 0 0 0 chr15 88892483 88892520 -14602454 + (CTTG)n Simple_repeat Simple_repeat 2 38 0 7 1263 1142 82 7 0 chr15 88892559 88892705 -14602269 - B1_Mus1 SINE Alu 0 148 2 7 1263 285 316 63 42 chr15 88893118 88893260 -14601714 + MLT1C LTR MaLR 291 435 -32 7 1263 457 282 83 6 chr15 88894369 88894526 -14600448 - MLT1D LTR MaLR -302 203 35 7 1263 317 79 97 6 chr15 88895113 88895173 -14599801 - B2_Mm2 SINE B2 -107 109 47 7 1263 1244 60 12 0 chr15 88895224 88895392 -14599582 - B2_Mm1t SINE B2 -22 171 2 8 1263 276 284 161 0 chr15 88896446 88896527 -14598447 - ORR1E LTR MaLR -2 377 284 8 1263 637 251 26 7 chr15 88896550 88896722 -14598252 - ORR1E LTR MaLR -220 174 1 8 1263 1397 90 16 5 chr15 88897412 88897601 -14597373 - B2_Mm2 SINE B2 -4 191 1 8 1263 273 57 0 0 chr15 88901069 88901104 -14593870 + (CGAG)n Simple_repeat Simple_repeat 4 38 0 8 1263 1790 180 42 66 chr15 88901582 88901963 -14593011 - ORR1D1 LTR MaLR -2 372 1 8 1263 1228 55 0 0 chr15 88902200 88902346 -14592628 + B1_Mus2 SINE Alu 2 147 0 8 1263 624 27 0 0 chr15 88902350 88902424 -14592550 + (GA)n Simple_repeat Simple_repeat 1 74 0 8 1263 244 338 0 14 chr15 88902737 88902809 -14592165 - ID4 SINE ID -11 72 2 8 1263 467 290 179 41 chr15 88902809 88903100 -14591874 - MER74A LTR ERVL -56 502 172 8 1263 507 230 70 21 chr15 88903210 88903352 -14591622 + B1_Mur1 SINE Alu 1 149 0 8 1263 180 0 0 0 chr15 88904660 88904680 -14590294 + (T)n Simple_repeat Simple_repeat 1 20 0 8 1263 856 142 58 6 chr15 88904953 88905109 -14589865 + URR1A DNA MER1_type 62 225 -1 8 1263 27 29 0 0 chr15 88906394 88906428 -14588546 + GC_rich Low_complexity Low_complexity 1 34 0 8 1263 246 160 93 0 chr15 88906451 88906526 -14588448 + (CCCGG)n Simple_repeat Simple_repeat 5 86 0 8 1263 27 81 0 0 chr15 88906587 88906649 -14588325 + GC_rich Low_complexity Low_complexity 1 62 0 8 1263 485 373 131 16 chr15 88907394 88907707 -14587267 - MLT1A LTR MaLR -7 367 19 8 1263 977 154 0 0 chr15 88909759 88909902 -14585072 - B1_Mus2 SINE Alu 0 147 5 8 1263 240 317 137 10 chr15 88909940 88910042 -14584932 + B3 SINE B2 80 194 -22 8 1263 621 264 122 6 chr15 88910383 88910547 -14584427 + B3A SINE B2 1 183 -15 8 1263 381 131 0 0 chr15 88910555 88910616 -14584358 + (TG)n Simple_repeat Simple_repeat 1 61 0 8 1263 22 0 0 0 chr15 88910988 88911010 -14583964 + AT_rich Low_complexity Low_complexity 1 22 0 8 1263 811 71 0 17 chr15 88912605 88912720 -14582254 - B2_Mm2 SINE B2 -80 115 3 8 1263 1352 57 28 6 chr15 88913709 88913886 -14581088 - B2_Mm2 SINE B2 -14 181 1 8 1263 431 282 115 23 chr15 88914033 88914207 -14580767 - MER77 LTR ERVL -143 464 275 8 1263 597 228 16 10 chr15 88914266 88914420 -14580554 + B1_Mur1 SINE Alu 1 149 0 8 1263 344 331 75 19 chr15 88914426 88914586 -14580388 - MER77 LTR ERVL -409 198 30 8 1263 212 0 0 35 chr15 88916918 88916947 -14578027 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 8 1263 1059 84 42 0 chr15 88918132 88918274 -14576700 - B1_Mur3 SINE Alu 0 149 2 8 1263 216 0 0 0 chr15 88918855 88918879 -14576095 + (CA)n Simple_repeat Simple_repeat 2 25 0 8 1263 210 143 0 0 chr15 88920760 88920795 -14574179 + (TCC)n Simple_repeat Simple_repeat 3 37 0 8 1263 781 103 35 0 chr15 88920835 88920951 -14574023 - B3 SINE B2 -96 120 1 8 1263 714 99 81 16 chr15 88920967 88921090 -14573884 - B2_Mm2 SINE B2 -63 132 2 8 1263 225 0 0 0 chr15 88921555 88921580 -14573394 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1263 1143 82 7 0 chr15 88921580 88921726 -14573248 - B1_Mus1 SINE Alu 0 148 2 8 1263 750 127 371 7 chr15 88921842 88921993 -14572981 - B3 SINE B2 -9 207 2 8 1263 593 252 0 0 chr15 88922253 88922368 -14572606 - PB1D9 SINE Alu -5 115 1 8 1263 232 267 124 38 chr15 88923760 88923865 -14571109 - MER20 DNA MER1_type -47 172 59 8 1263 813 181 14 21 chr15 88923865 88924006 -14570968 + B1_Mus2 SINE Alu 1 140 -7 8 1263 1258 47 0 0 chr15 88924029 88924177 -14570797 + B1_Mus1 SINE Alu 1 148 0 8 1263 522 165 173 47 chr15 88924875 88925002 -14569972 - B1_Mus2 SINE Alu 0 147 5 8 1263 1179 98 6 11 chr15 88926292 88926468 -14568506 - B2_Mm2 SINE B2 -20 175 1 8 1263 328 333 48 10 chr15 88926539 88926642 -14568332 - B1F1 SINE Alu -41 108 2 8 1263 245 400 16 24 chr15 88926642 88926656 -14568318 - ID_B1 SINE B4 -33 161 70 8 1263 346 196 48 19 chr15 88927436 88927540 -14567434 - L1MB3 LINE L1 -288 5895 5789 8 1263 231 271 100 0 chr15 88927671 88927741 -14567233 - L1M3 LINE L1 -1998 4142 4066 8 1263 295 244 81 0 chr15 88927756 88927842 -14567132 - B1F SINE Alu -36 113 21 8 1263 391 244 172 9 chr15 88927889 88928005 -14566969 - B1_Mur2 SINE Alu -8 141 7 8 1263 346 226 31 20 chr15 88928174 88928291 -14566683 - B1_Mur4 SINE Alu -3 124 6 8 1263 920 172 28 0 chr15 88928306 88928451 -14566523 + B1_Mur4 SINE Alu 2 150 0 8 1263 1051 91 21 0 chr15 88928478 88928621 -14566353 + B1_Mm SINE Alu 2 147 0 8 1263 216 191 0 0 chr15 88936057 88936106 -14558868 + B1F SINE Alu 15 63 -86 8 1263 230 246 46 0 chr15 88936125 88936190 -14558784 + ID4 SINE ID 6 73 -10 8 1263 263 125 0 0 chr15 88936390 88936430 -14558544 + ID2 SINE ID 4 43 -40 8 1263 216 281 30 30 chr15 88937562 88937694 -14557280 + (CCTG)n Simple_repeat Simple_repeat 3 134 0 8 1263 1984 157 78 8 chr15 88938588 88938960 -14556014 - RMER10B LTR ERVL 0 398 1 8 1263 586 311 11 43 chr15 88941876 88942064 -14552910 + B3A SINE B2 1 182 -16 8 1263 444 176 185 0 chr15 88942074 88942193 -14552781 + B1_Mm SINE Alu 7 147 0 8 1263 369 0 0 0 chr15 88942221 88942262 -14552712 + (GA)n Simple_repeat Simple_repeat 2 42 0 8 1263 280 295 119 19 chr15 88942267 88942426 -14552548 + B3 SINE B2 41 215 -1 8 1263 601 132 12 0 chr15 88942774 88942878 -14552096 + B3 SINE B2 3 108 -85 8 1263 775 149 48 34 chr15 88942989 88943135 -14551839 + B1_Mur3 SINE Alu 2 149 0 8 1263 507 276 78 50 chr15 88943154 88943179 -14551795 + RSINE1 SINE B4 3 26 -139 8 1263 2198 146 88 33 chr15 88943179 88943575 -14551399 + MTD LTR MaLR 2 419 0 8 1263 507 276 78 50 chr15 88943575 88943690 -14551284 + RSINE1 SINE B4 27 147 -18 8 1263 394 228 13 0 chr15 88943738 88943817 -14551157 + ID4 SINE ID 3 82 -1 8 1263 336 259 102 0 chr15 88943825 88943933 -14551041 + L1M4 LINE L1 3356 3474 -2672 8 1263 878 222 69 0 chr15 88944046 88944235 -14550739 + B3 SINE B2 2 203 -13 8 1263 225 0 0 0 chr15 88944247 88944272 -14550702 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 1263 219 69 0 0 chr15 88944295 88944324 -14550650 + (A)n Simple_repeat Simple_repeat 1 29 0 8 1263 820 150 70 21 chr15 88944360 88944503 -14550471 + B1_Mur4 SINE Alu 1 150 0 8 1263 25 0 0 0 chr15 88944507 88944532 -14550442 + AT_rich Low_complexity Low_complexity 1 25 0 8 1263 688 147 33 14 chr15 88944664 88944813 -14550161 - B1_Mur2 SINE Alu -1 148 1 8 1263 301 265 14 83 chr15 88944684 88944828 -14550146 - MT2B LTR ERVL -315 286 153 8 1263 1220 61 0 0 chr15 88944877 88945024 -14549950 - B1_Mus1 SINE Alu -1 147 1 8 1263 590 192 39 16 chr15 88945052 88945179 -14549795 - B1_Mur1 SINE Alu -1 148 19 8 1263 392 253 226 60 chr15 88945089 88945257 -14549717 - B4 SINE B4 -95 197 2 8 1263 354 270 148 0 chr15 88945259 88945374 -14549600 - ID_B1 SINE B4 -7 217 86 8 1263 213 316 127 0 chr15 88945420 88945499 -14549475 + PB1D10 SINE Alu 27 115 -2 8 1263 180 111 0 0 chr15 88945549 88945576 -14549398 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 8 1263 1115 104 0 0 chr15 88945579 88945723 -14549251 - B1_Mus1 SINE Alu -2 146 3 8 1263 1236 105 28 0 chr15 88945743 88945924 -14549050 - B2_Mm1t SINE B2 -6 187 2 8 1263 488 243 9 0 chr15 88945927 88946034 -14548940 - PB1D10 SINE Alu 0 117 10 8 1263 292 309 0 0 chr15 88946253 88946334 -14548640 - ID4_ SINE ID 0 83 3 8 1263 1251 154 14 55 chr15 88946879 88947099 -14547875 - B3 SINE B2 -5 211 1 8 1263 506 268 23 8 chr15 88947100 88947228 -14547746 - B3 SINE B2 -7 209 80 8 1263 415 56 55 27 chr15 88947222 88947295 -14547679 + B1_Mur4 SINE Alu 75 149 -1 8 1263 938 163 202 0 chr15 88947339 88947517 -14547457 + B3 SINE B2 1 214 -2 8 1263 1340 79 22 0 chr15 88947521 88947699 -14547275 - B2_Mm2 SINE B2 -10 185 4 8 1263 33 25 0 0 chr15 88947701 88947741 -14547233 + AT_rich Low_complexity Low_complexity 1 40 0 8 1263 542 54 0 13 chr15 88947842 88947917 -14547057 + (GGGA)n Simple_repeat Simple_repeat 3 76 0 8 1263 597 225 44 44 chr15 88948063 88948258 -14546716 - B3A SINE B2 -5 211 1 8 1263 342 149 45 0 chr15 88948385 88948452 -14546522 + B1F SINE Alu 79 148 -1 8 1263 909 216 57 24 chr15 88948546 88948688 -14546286 - B3 SINE B2 0 216 71 8 1263 248 0 0 30 chr15 88948688 88948721 -14546253 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 8 1263 909 216 57 24 chr15 88948721 88948787 -14546187 - B3 SINE B2 -146 70 1 8 1263 216 0 0 0 chr15 88948838 88948862 -14546112 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 8 1263 872 180 0 14 chr15 88948865 88949006 -14545968 - B1_Mus1 SINE Alu -9 139 1 8 1263 708 251 60 5 chr15 88949015 88949215 -14545759 - B3 SINE B2 -3 213 3 8 1263 1231 34 0 20 chr15 88949218 88949367 -14545607 - B1_Mus2 SINE Alu -1 146 1 8 1263 478 212 111 0 chr15 88949513 88949612 -14545362 + PB1 SINE Alu 10 119 -8 8 1263 603 38 0 0 chr15 88949809 88949888 -14545086 + L1Md_A LINE L1 6504 6582 0 8 1263 889 89 41 0 chr15 88950320 88950443 -14544531 + B1_Mus1 SINE Alu 2 129 -19 8 1263 253 286 151 0 chr15 88951318 88951420 -14543554 + B1F SINE Alu 1 115 -2 8 1263 355 195 39 0 chr15 88951490 88951567 -14543407 + PB1D7 SINE Alu 27 106 -14 9 1263 293 234 76 93 chr15 88951696 88951814 -14543160 + MT2B2 LTR ERVL 143 258 -326 9 1263 619 123 114 0 chr15 88951731 88951845 -14543129 + B1_Mur3 SINE Alu 23 149 0 9 1263 1059 56 7 0 chr15 88952085 88952227 -14542747 - B1_Mus1 SINE Alu 0 148 6 9 1263 228 284 125 33 chr15 88953829 88953949 -14541025 - MER63A DNA AcHobo -68 142 12 9 1263 21 0 0 0 chr15 88954551 88954572 -14540402 + GC_rich Low_complexity Low_complexity 1 21 0 9 1263 1328 95 20 41 chr15 88955440 88955637 -14539337 - B2_Mm2 SINE B2 -1 194 2 9 1263 183 186 0 0 chr15 88959221 88959264 -14535710 + CT-rich Low_complexity Low_complexity 2 44 0 9 1263 336 351 40 29 chr15 88959707 88959880 -14535094 + L1MC3 LINE L1 6472 6646 -1139 9 1263 232 290 57 0 chr15 88959913 88960037 -14534937 - L1MC4 LINE L1 -1336 6706 6576 9 1263 824 249 18 97 chr15 88963792 88964019 -14530955 + B3 SINE B2 1 209 -7 9 1263 1229 47 0 0 chr15 88964037 88964185 -14530789 + B1_Mus1 SINE Alu 1 148 0 9 1263 579 256 8 8 chr15 88964197 88964319 -14530655 + B1_Mur1 SINE Alu 2 123 -26 9 1263 246 147 25 150 chr15 88964297 88964328 -14530646 + 4.5SRNA scRNA scRNA 17 41 -53 9 1263 819 105 0 0 chr15 88964328 88964452 -14530522 + (GGAA)n Simple_repeat Simple_repeat 4 127 0 9 1263 246 147 25 150 chr15 88964452 88964500 -14530474 + 4.5SRNA scRNA scRNA 42 86 -8 9 1263 627 115 19 19 chr15 88964500 88964558 -14530416 + B1_Mur2 SINE Alu 44 149 0 9 1263 420 169 0 0 chr15 88964626 88964703 -14530271 + GA-rich Low_complexity Low_complexity 1 77 0 9 1263 971 137 0 6 chr15 88964705 88964881 -14530093 + (GAAA)n Simple_repeat Simple_repeat 4 178 0 9 1263 377 279 13 0 chr15 88964894 88964973 -14530001 + ID4 SINE ID 2 81 -2 9 1263 733 193 0 54 chr15 88966362 88966510 -14528464 - B1_Mur1 SINE Alu -1 148 9 9 1263 1031 246 14 5 chr15 88966523 88966735 -14528239 - B3 SINE B2 -1 215 2 9 1263 402 257 37 19 chr15 88966739 88966846 -14528128 - PB1D10 SINE Alu 0 117 9 9 1263 713 143 26 174 chr15 88967401 88967468 -14527506 + URR1A DNA MER1_type 61 131 -95 9 1263 1235 14 0 0 chr15 88967468 88967606 -14527368 + B1_Mus1 SINE Alu 2 139 -9 9 1263 713 143 26 174 chr15 88967606 88967733 -14527241 + URR1A DNA MER1_type 132 226 0 9 1263 410 94 0 15 chr15 88968983 88969048 -14525926 + (GGA)n Simple_repeat Simple_repeat 2 65 0 9 1263 577 191 93 22 chr15 88969416 88969555 -14525419 - B1_Mur4 SINE Alu -1 149 1 9 1263 180 0 0 0 chr15 88969561 88969581 -14525393 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 9 1263 384 77 0 0 chr15 88969825 88969877 -14525097 + (TAA)n Simple_repeat Simple_repeat 1 52 0 9 1263 369 0 0 0 chr15 88973999 88974040 -14520934 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1263 342 0 0 0 chr15 88974319 88974357 -14520617 + (CA)n Simple_repeat Simple_repeat 2 39 0 9 1263 1021 117 14 14 chr15 88975065 88975213 -14519761 + B1_Mus1 SINE Alu 1 148 0 9 1263 463 209 16 65 chr15 88977717 88977840 -14517134 + PB1D10 SINE Alu 1 117 0 9 1263 225 0 0 0 chr15 88977859 88977884 -14517090 + (CA)n Simple_repeat Simple_repeat 2 26 0 9 1263 233 211 39 26 chr15 88980018 88980096 -14514878 + (CGGGG)n Simple_repeat Simple_repeat 3 81 0 9 1263 1262 114 114 0 chr15 88980968 88981170 -14513804 + URR1B DNA MER1_type 1 225 0 9 1263 567 200 120 0 chr15 88981211 88981336 -14513638 + B1_Mur2 SINE Alu 1 140 -9 9 1263 546 321 7 0 chr15 88981381 88981518 -14513456 + B1F SINE Alu 2 139 -10 9 1263 206 109 0 42 chr15 88981521 88981569 -14513405 + GA-rich Low_complexity Low_complexity 1 46 0 9 1263 267 226 80 18 chr15 88981571 88981652 -14513322 + B1F2 SINE Alu 1 81 -39 9 1263 212 0 36 0 chr15 88981680 88981708 -14513266 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 9 1263 288 0 0 0 chr15 88981789 88981821 -14513153 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 9 1263 588 174 304 19 chr15 88981825 88981983 -14512991 - B3 SINE B2 -13 203 1 9 1263 300 91 0 0 chr15 88981995 88982039 -14512935 + (TC)n Simple_repeat Simple_repeat 1 44 0 9 1263 1088 116 0 0 chr15 88982040 88982187 -14512787 - B1_Mus1 SINE Alu 0 148 2 9 1263 290 237 40 0 chr15 88982231 88982307 -14512667 + ID4_ SINE ID 2 80 -3 9 1263 222 37 0 0 chr15 88982310 88982337 -14512637 + (TAA)n Simple_repeat Simple_repeat 1 27 0 9 1263 1031 135 7 0 chr15 88982384 88982532 -14512442 + B1_Mur4 SINE Alu 1 149 -1 9 1263 741 23 0 0 chr15 88983204 88983291 -14511683 + (TC)n Simple_repeat Simple_repeat 1 87 0 9 1263 183 42 0 0 chr15 88983456 88983480 -14511494 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 1263 1699 31 0 0 chr15 88983644 88983836 -14511138 - B2_Mm1a SINE B2 0 193 2 9 1263 280 281 76 16 chr15 88984706 88984789 -14510185 + MT2B LTR ERVL 154 270 -331 9 1263 325 184 299 0 chr15 88984789 88984876 -14510098 + B1_Mm SINE Alu 1 113 -34 9 1263 1335 162 86 51 chr15 88985019 88985332 -14509642 + ORR1D1 LTR MaLR 8 331 -43 9 1263 299 224 11 45 chr15 88985542 88985631 -14509343 + B4 SINE B4 2 87 -205 9 1263 204 97 0 0 chr15 88985748 88985779 -14509195 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 1263 197 65 0 31 chr15 88989854 88989886 -14505088 + (CCCCCA)n Simple_repeat Simple_repeat 6 36 0 9 1263 2174 162 62 16 chr15 88993952 88994401 -14500573 + RMER4A LTR ERVK 1 585 0 9 1263 253 350 12 0 chr15 88996595 88996677 -14498297 + ID4 SINE ID 3 84 -68 9 1264 288 77 0 0 chr15 88998880 88998919 -14496055 + (GA)n Simple_repeat Simple_repeat 1 39 0 9 1264 297 0 0 0 chr15 88998941 88998974 -14496000 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1264 656 229 11 83 chr15 88999025 88999206 -14495768 + B3 SINE B2 49 216 0 9 1264 206 275 125 0 chr15 88999324 88999404 -14495570 - MIR SINE MIR -124 138 49 9 1264 226 333 14 14 chr15 89000457 89000530 -14494444 + ID2 SINE ID 1 73 -10 1 1264 527 133 105 0 chr15 89001304 89001409 -14493565 + B1_Mus2 SINE Alu 32 147 0 2 1264 583 176 61 8 chr15 89001488 89001620 -14493354 + MIR SINE MIR 70 208 -54 3 1264 347 315 39 0 chr15 89002686 89002816 -14492158 + MIR SINE MIR 40 174 -88 4 1264 450 0 0 0 chr15 89006629 89006679 -14488295 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1264 361 184 26 13 chr15 89006938 89007015 -14487959 + PB1D9 SINE Alu 43 120 0 6 1264 26 50 0 0 chr15 89011196 89011236 -14483738 + GC_rich Low_complexity Low_complexity 1 40 0 7 1264 249 260 13 13 chr15 89011237 89011315 -14483659 + GA-rich Low_complexity Low_complexity 2 79 0 8 1264 266 92 0 109 chr15 89011958 89012053 -14482921 - B2_Mm2 SINE B2 -13 182 47 9 1264 1106 95 65 0 chr15 89012066 89012234 -14482740 - B2_Mm1t SINE B2 -14 179 1 1 1264 214 336 48 8 chr15 89013732 89013858 -14481116 + MIR SINE MIR 99 229 -33 1 1264 22 0 0 0 chr15 89017031 89017053 -14477921 + GC_rich Low_complexity Low_complexity 1 22 0 1 1264 205 70 22 44 chr15 89017484 89017529 -14477445 + (CAGAGA)n Simple_repeat Simple_repeat 2 45 0 1 1264 1324 62 39 6 chr15 89018132 89018311 -14476663 - B2_Mm2 SINE B2 -10 185 1 1 1264 810 137 7 80 chr15 89020039 89020190 -14474784 + B1_Mur2 SINE Alu 2 141 -8 1 1264 703 222 93 32 chr15 89021661 89021880 -14473094 + MTD LTR MaLR 1 213 -183 1 1264 245 287 0 33 chr15 89021964 89022054 -14472920 + ID_B1 SINE B4 136 222 -2 1 1264 368 206 36 8 chr15 89021975 89022059 -14472915 + B1_Mus2 SINE Alu 43 147 0 1 1264 221 176 0 150 chr15 89022218 89022278 -14472696 - PB1D9 SINE Alu -68 52 2 1 1264 1185 108 16 5 chr15 89022307 89022494 -14472480 + B2_Mm1a SINE B2 1 189 -4 2 1264 216 0 0 0 chr15 89022494 89022518 -14472456 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1264 1031 71 29 0 chr15 89022519 89022659 -14472315 + B1_Mus1 SINE Alu 5 148 0 2 1264 210 103 25 25 chr15 89022661 89022701 -14472273 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 2 1264 546 174 0 136 chr15 89022705 89022845 -14472129 + B1_Mur2 SINE Alu 10 130 -19 2 1264 703 160 48 8 chr15 89022906 89023032 -14471942 + B1_Mus1 SINE Alu 5 135 -13 2 1264 337 320 57 16 chr15 89023989 89024093 -14470881 + B1F1 SINE Alu 1 103 -46 2 1264 1188 100 10 21 chr15 89024093 89024271 -14470703 + B2_Mm1t SINE B2 2 179 -14 2 1264 996 67 74 0 chr15 89024271 89024406 -14470568 + B1_Mm SINE Alu 1 145 -2 2 1264 1188 100 10 21 chr15 89024406 89024421 -14470553 + B2_Mm1t SINE B2 180 193 0 2 1264 303 320 57 16 chr15 89024421 89024440 -14470534 + B1_Mus2 SINE Alu 103 128 -19 2 1264 521 286 157 0 chr15 89024443 89024628 -14470346 + ID_B1 SINE B4 5 218 -6 2 1264 850 182 0 0 chr15 89024751 89024899 -14470075 - B1_Mur2 SINE Alu -1 148 1 3 1264 1131 54 7 0 chr15 89025022 89025169 -14469805 - B1_Mus1 SINE Alu 0 148 1 3 1264 1414 58 27 0 chr15 89025277 89025465 -14469509 - B2_Mm1t SINE B2 0 193 1 3 1264 510 167 135 48 chr15 89025471 89025597 -14469377 - B1_Mur1 SINE Alu -5 144 8 3 1264 201 182 45 0 chr15 89025600 89025644 -14469330 + CT-rich Low_complexity Low_complexity 1 46 0 3 1264 759 181 0 7 chr15 89027384 89027523 -14467451 + B1_Mus2 SINE Alu 9 146 -1 3 1264 565 214 116 14 chr15 89027560 89027707 -14467267 + B3 SINE B2 1 162 -54 3 1264 495 216 12 0 chr15 89028390 89028496 -14466478 - B1_Mur1 SINE Alu -11 138 22 3 1264 460 88 0 0 chr15 89028553 89028621 -14466353 - B1_Mur4 SINE Alu -1 149 82 3 1264 254 262 12 36 chr15 89028621 89028636 -14466338 - ID_B1 SINE B4 -1 223 143 3 1264 1135 62 51 92 chr15 89029012 89029040 -14465934 - B2_Mm1a SINE B2 -4 189 171 4 1264 1107 100 22 22 chr15 89029040 89029224 -14465750 + B2_Mm1t SINE B2 1 184 -9 4 1264 1135 62 51 92 chr15 89029224 89029391 -14465583 - B2_Mm1a SINE B2 -23 170 2 4 1264 814 179 0 20 chr15 89029476 89029624 -14465350 - B1_Mur3 SINE Alu -2 147 3 4 1264 207 0 0 0 chr15 89029649 89029672 -14465302 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1264 981 55 70 0 chr15 89029672 89029800 -14465174 - B1_Mus2 SINE Alu -9 138 2 4 1264 369 0 0 0 chr15 89029804 89029845 -14465129 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 4 1264 1128 140 0 40 chr15 89030419 89030462 -14464512 - B2_Mm2 SINE B2 -2 193 158 4 1264 342 0 0 0 chr15 89030462 89030500 -14464474 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 4 1264 1128 140 0 40 chr15 89030500 89030657 -14464317 - B2_Mm2 SINE B2 -38 157 1 4 1264 213 250 56 136 chr15 89030663 89030701 -14464273 - B2_Mm2 SINE B2 -4 191 149 4 1264 324 0 0 0 chr15 89030701 89030737 -14464237 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1264 386 248 94 9 chr15 89030737 89030823 -14464151 - B3 SINE B2 -50 166 78 4 1264 628 158 0 77 chr15 89030842 89030972 -14464002 - B1_Mur4 SINE Alu -25 125 6 5 1264 434 330 0 0 chr15 89031000 89031115 -14463859 - PB1D10 SINE Alu 0 117 3 5 1264 1170 93 52 0 chr15 89031177 89031349 -14463625 - B2_Mm2 SINE B2 -14 181 1 5 1264 244 250 209 33 chr15 89031381 89031472 -14463502 + PB1D10 SINE Alu 2 108 -9 5 1264 320 266 141 77 chr15 89031506 89031754 -14463220 - L1ME2z LINE L1 -245 6199 5936 5 1264 438 237 19 58 chr15 89031762 89031865 -14463109 - RSINE1 SINE B4 -11 154 56 5 1264 233 333 73 34 chr15 89031927 89031956 -14463018 - B3A SINE B2 -3 195 12 5 1264 455 259 7 88 chr15 89031956 89032104 -14462870 - RSINE1 SINE B4 -17 148 13 5 1264 627 271 20 0 chr15 89032177 89032328 -14462646 + B3A SINE B2 1 154 -44 5 1264 1781 140 76 47 chr15 89032364 89032747 -14462227 - ORR1B1 LTR MaLR 0 394 1 5 1264 915 133 125 58 chr15 89032966 89033174 -14461800 + URR1A DNA MER1_type 5 226 0 6 1264 1688 121 142 3 chr15 89033246 89033570 -14461404 - ORR1B1 LTR MaLR -24 370 2 6 1264 194 0 39 0 chr15 89033614 89033640 -14461334 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1264 236 233 207 11 chr15 89033653 89033740 -14461234 - PB1D7 SINE Alu -15 105 2 6 1264 715 148 15 59 chr15 89033789 89033925 -14461049 + B1_Mur4 SINE Alu 10 139 -11 6 1264 303 28 0 0 chr15 89033926 89033962 -14461012 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 6 1264 253 231 19 0 chr15 89033978 89034030 -14460944 + B4 SINE B4 6 58 -234 6 1264 621 200 46 13 chr15 89034028 89034180 -14460794 + B2_Mm2 SINE B2 12 168 -27 6 1264 619 260 26 7 chr15 89034194 89034345 -14460629 + B3A SINE B2 1 154 -44 6 1264 236 53 0 50 chr15 89034513 89034553 -14460421 + B3A SINE B2 1 38 -160 6 1264 768 52 0 57 chr15 89034554 89034676 -14460298 + BC1_Mm scRNA scRNA 1 115 -37 7 1264 520 261 18 67 chr15 89034679 89034843 -14460131 + B3A SINE B2 43 198 0 7 1264 611 267 20 7 chr15 89034859 89035006 -14459968 + B4 SINE B4 81 229 -63 6 1264 1173 34 0 13 chr15 89035019 89035157 -14459817 + B1_Mm SINE Alu 1 138 -9 7 1264 216 86 0 0 chr15 89035157 89035192 -14459782 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1264 423 309 67 80 chr15 89035288 89035689 -14459285 - L1M4b LINE L1 -1983 5023 4628 7 1264 1126 58 0 0 chr15 89035706 89035844 -14459130 - B1_Mm SINE Alu -9 138 1 7 1264 1144 96 39 17 chr15 89035852 89036033 -14458941 - B2_Mm1t SINE B2 -5 188 4 7 1264 477 285 0 15 chr15 89036188 89036320 -14458654 - ID_B1 SINE B4 -1 223 94 7 1264 192 97 97 0 chr15 89036346 89036408 -14458566 + (ATATG)n Simple_repeat Simple_repeat 2 69 0 7 1264 546 184 55 0 chr15 89036552 89036661 -14458313 + B1_Mus1 SINE Alu 15 129 -19 7 1264 1767 185 30 63 chr15 89036661 89037088 -14457886 + RMER10A LTR ERVL 1 413 -29 8 1264 726 44 0 0 chr15 89037088 89037178 -14457796 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 8 1264 575 290 1 9 chr15 89037215 89037365 -14457609 - B3 SINE B2 -38 155 7 8 1264 770 193 0 0 chr15 89037402 89037542 -14457432 - B1_Mus2 SINE Alu -7 140 1 8 1264 1104 76 7 0 chr15 89037568 89037713 -14457261 - B1_Mus2 SINE Alu 0 147 2 8 1264 419 227 11 0 chr15 89037718 89037806 -14457168 - B4A SINE B4 -201 91 3 8 1264 510 61 0 0 chr15 89037807 89037873 -14457101 + (TCC)n Simple_repeat Simple_repeat 1 66 0 8 1264 612 130 0 0 chr15 89037873 89037973 -14457001 - B1_Mur4 SINE Alu -6 144 45 8 1264 252 291 77 26 chr15 89038044 89038199 -14456775 - L1M4b LINE L1 -5165 2169 2007 7 1264 417 333 85 17 chr15 89038635 89038788 -14456186 + LTR41B LTR ERVL 493 656 -102 8 1264 1148 55 0 0 chr15 89038788 89038934 -14456040 - B1_Mus2 SINE Alu 0 147 2 8 1264 417 333 85 17 chr15 89038934 89039015 -14455959 + LTR41B LTR ERVL 657 743 -15 8 1264 266 194 0 16 chr15 89039122 89039185 -14455789 + GA-rich Low_complexity Low_complexity 1 62 0 9 1264 414 321 96 15 chr15 89039311 89039510 -14455464 - L2 LINE L2 -469 2950 2736 9 1264 1171 48 0 0 chr15 89039708 89039855 -14455119 + B1_Mm SINE Alu 1 147 0 9 1264 351 125 0 0 chr15 89039855 89039927 -14455047 + (A)n Simple_repeat Simple_repeat 1 72 0 9 1264 491 231 19 0 chr15 89039940 89040048 -14454926 - ID_B1 SINE B4 -13 211 102 9 1264 194 0 39 0 chr15 89040061 89040087 -14454887 + (GAAA)n Simple_repeat Simple_repeat 3 29 0 9 1264 1106 97 74 0 chr15 89040087 89040263 -14454711 + B2_Mm1t SINE B2 4 192 -1 9 1264 378 0 0 0 chr15 89040375 89040417 -14454557 + (TG)n Simple_repeat Simple_repeat 2 43 0 9 1264 253 321 28 90 chr15 89040683 89040827 -14454147 - LTR41 LTR ERVL -563 205 71 9 1264 426 236 102 39 chr15 89040841 89040969 -14454005 - B1_Mur1 SINE Alu -13 136 1 9 1264 317 59 39 0 chr15 89041273 89041324 -14453650 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 1 1264 622 138 7 78 chr15 89041324 89041465 -14453509 + B1_Mur3 SINE Alu 19 149 0 1 1264 207 0 0 0 chr15 89041465 89041488 -14453486 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1264 1189 100 39 0 chr15 89041495 89041675 -14453299 + B2_Mm2 SINE B2 9 195 0 1 1264 22 0 0 0 chr15 89041893 89041915 -14453059 + GC_rich Low_complexity Low_complexity 1 22 0 1 1264 221 185 15 0 chr15 89041915 89041980 -14452994 + (CCCG)n Simple_repeat Simple_repeat 3 68 0 1 1264 291 54 0 0 chr15 89042427 89042464 -14452510 + (TCCA)n Simple_repeat Simple_repeat 2 38 0 1 1264 540 184 143 8 chr15 89043282 89043408 -14451566 - B1_Mur4 SINE Alu -7 143 1 1 1264 451 211 187 0 chr15 89043445 89043568 -14451406 - B1_Mur2 SINE Alu 0 149 4 1 1264 1212 21 7 0 chr15 89043670 89043815 -14451159 + B1_Mus1 SINE Alu 2 147 -1 1 1264 234 81 0 0 chr15 89043816 89043853 -14451121 + (A)n Simple_repeat Simple_repeat 1 37 0 1 1264 812 132 20 59 chr15 89043867 89044020 -14450954 - B1_Mur4 SINE Alu -1 149 3 1 1264 826 189 0 7 chr15 89044735 89044884 -14450090 - B1_Mur2 SINE Alu -1 148 1 1 1264 241 284 31 21 chr15 89044894 89044991 -14449983 - MIR SINE MIR -56 206 109 1 1264 196 296 19 0 chr15 89045123 89045177 -14449797 - MIRb SINE MIR -38 230 176 1 1264 776 261 23 9 chr15 89045216 89045436 -14449538 - ID_B1 SINE B4 -1 223 1 1 1264 22 0 0 0 chr15 89045438 89045460 -14449514 + AT_rich Low_complexity Low_complexity 1 22 0 1 1264 347 268 132 18 chr15 89045461 89045575 -14449399 - ID_B1 SINE B4 -16 208 82 1 1264 341 274 78 10 chr15 89045612 89045715 -14449259 + B4A SINE B4 2 111 -181 1 1264 226 263 39 13 chr15 89045732 89045809 -14449165 - RMER6B LTR ERVK -15 446 368 1 1264 295 119 26 118 chr15 89047076 89047128 -14447846 + B1_Mur2 SINE Alu 79 129 -20 1 1264 1531 142 139 36 chr15 89047128 89047465 -14447509 - ORR1D1 LTR MaLR 0 374 3 1 1264 295 119 26 118 chr15 89047465 89047488 -14447486 + B1_Mur2 SINE Alu 130 147 -2 1 1264 402 195 13 0 chr15 89047564 89047641 -14447333 - RSINE1 SINE B4 -35 130 53 1 1264 271 301 48 104 chr15 89047815 89047866 -14447108 - L1ME3 LINE L1 -39 6125 6075 1 1264 646 241 0 21 chr15 89047866 89048010 -14446964 + B1_Mur1 SINE Alu 2 142 -7 1 1264 286 281 51 67 chr15 89048010 89048207 -14446767 - L1ME3 LINE L1 -90 6074 5891 1 1264 558 0 0 0 chr15 89048278 89048340 -14446634 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 1264 198 71 0 0 chr15 89048360 89048388 -14446586 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1 1264 1062 53 8 0 chr15 89048388 89048521 -14446453 - B1_Mus1 SINE Alu -13 135 2 1 1264 819 242 0 10 chr15 89048682 89048711 -14446263 - B2_Mm2 SINE B2 0 195 167 1 1264 270 0 0 0 chr15 89048711 89048741 -14446233 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 1 1264 819 242 0 10 chr15 89048741 89048907 -14446067 - B2_Mm2 SINE B2 -29 166 3 1 1264 347 239 152 12 chr15 89049038 89049241 -14445733 - L1M4 LINE L1 -1832 4314 4087 1 1264 418 241 28 28 chr15 89049402 89049581 -14445393 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 1264 197 205 15 36 chr15 89049657 89049794 -14445180 + (TG)n Simple_repeat Simple_repeat 1 134 0 1 1264 459 232 5 58 chr15 89049869 89050057 -14444917 + (TG)n Simple_repeat Simple_repeat 1 178 0 1 1264 194 175 12 36 chr15 89050081 89050164 -14444810 + (TG)n Simple_repeat Simple_repeat 2 82 0 1 1264 400 243 5 58 chr15 89050185 89050373 -14444601 + (TG)n Simple_repeat Simple_repeat 1 178 0 1 1264 447 279 36 42 chr15 89050397 89050562 -14444412 - RSINE1 SINE B4 0 165 2 1 1264 412 235 132 55 chr15 89050564 89050821 -14444153 - L1M4 LINE L1 -2186 3960 3684 1 1264 245 200 15 44 chr15 89050821 89050889 -14444085 + CT-rich Low_complexity Low_complexity 2 67 0 1 1264 414 181 51 41 chr15 89050928 89051026 -14443948 - PB1D7 SINE Alu 0 120 22 1 1264 268 301 54 0 chr15 89051105 89051198 -14443776 - PB1D7 SINE Alu -22 98 1 1 1264 240 221 206 0 chr15 89051208 89051276 -14443698 - PB1D10 SINE Alu -8 109 28 1 1264 315 226 69 79 chr15 89051296 89051397 -14443577 - ID_B1 SINE B4 -21 203 104 1 1264 1146 22 0 0 chr15 89051522 89051656 -14443318 - B1_Mm SINE Alu -11 136 3 1 1264 286 287 2 56 chr15 89051878 89051989 -14442985 + L1MEb LINE L1 8 114 -5956 1 1264 1110 62 7 0 chr15 89052037 89052182 -14442792 + B1_Mus1 SINE Alu 2 147 -1 1 1264 268 298 117 0 chr15 89052234 89052328 -14442646 + PB1D7 SINE Alu 2 106 -14 1 1264 348 202 106 0 chr15 89052382 89052476 -14442498 - B1_Mm SINE Alu -1 146 43 1 1264 870 148 144 32 chr15 89052487 89052675 -14442299 + B3 SINE B2 1 209 -7 1 1264 423 267 43 29 chr15 89052802 89052941 -14442033 - ID_B1 SINE B4 0 224 84 1 1264 767 121 156 0 chr15 89053025 89053166 -14441808 - B2_Mm2 SINE B2 -32 163 1 1 1264 273 199 64 28 chr15 89053178 89053266 -14441708 - ID4_ SINE ID -59 93 5 1 1264 481 244 84 90 chr15 89053249 89053416 -14441558 + B4 SINE B4 55 220 -72 1 1264 1034 44 0 0 chr15 89053287 89053422 -14441552 + B1_Mus1 SINE Alu 14 148 0 1 1264 215 31 0 30 chr15 89053429 89053462 -14441512 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 1 1264 517 261 12 24 chr15 89053486 89053637 -14441337 + RSINE1 SINE B4 3 151 -14 1 1264 384 22 0 0 chr15 89053637 89053682 -14441292 + (TC)n Simple_repeat Simple_repeat 1 45 0 1 1264 517 261 12 24 chr15 89053682 89053695 -14441279 + RSINE1 SINE B4 152 164 -1 1 1264 744 152 0 0 chr15 89054152 89054284 -14440690 + (TG)n Simple_repeat Simple_repeat 1 132 0 1 1264 631 256 33 38 chr15 89054286 89054469 -14440505 - B3A SINE B2 -16 182 1 1 1264 702 35 0 0 chr15 89054544 89054629 -14440345 + (TTTC)n Simple_repeat Simple_repeat 1 85 0 1 1264 1109 37 0 0 chr15 89054629 89054764 -14440210 - B1_Mus1 SINE Alu -12 136 2 1 1264 276 308 80 37 chr15 89054768 89054930 -14440044 - L1MEb LINE L1 -5901 169 1 1 1264 303 28 0 0 chr15 89054940 89054976 -14439998 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1264 411 21 0 0 chr15 89054976 89055023 -14439951 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1264 330 286 13 22 chr15 89055025 89055128 -14439846 - B1_Mur2 SINE Alu 0 149 47 1 1264 273 333 112 62 chr15 89055128 89055143 -14439831 - ID_B1 SINE B4 0 224 98 1 1264 1434 148 226 88 chr15 89055143 89055611 -14439363 + MT2A LTR ERVL 1 533 0 1 1264 273 333 112 62 chr15 89055611 89055652 -14439322 - ID_B1 SINE B4 -127 97 57 1 1264 345 152 14 57 chr15 89055627 89055697 -14439277 - PB1 SINE Alu -2 125 59 1 1264 228 182 0 0 chr15 89056020 89056064 -14438910 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1264 307 309 322 79 chr15 89056321 89056703 -14438271 - MLT1G1 LTR MaLR 0 591 106 1 1264 360 295 61 61 chr15 89056703 89056851 -14438123 - B1F SINE Alu -1 148 1 1 1264 244 321 98 82 chr15 89056851 89056879 -14438095 - MLT1G1 LTR MaLR -444 105 77 1 1264 532 271 8 8 chr15 89057172 89057295 -14437679 - B1F SINE Alu -3 146 24 1 1264 477 138 14 5 chr15 89057789 89057882 -14437092 - B1_Mur3 SINE Alu -52 95 5 1 1264 898 146 14 7 chr15 89057899 89058044 -14436930 + B1_Mur4 SINE Alu 3 148 -2 1 1264 1465 62 0 0 chr15 89058046 89058225 -14436749 + B2_Mm2 SINE B2 2 180 -15 1 1264 831 187 7 0 chr15 89058292 89058431 -14436543 - B1_Mur1 SINE Alu -9 140 1 1 1264 777 233 33 113 chr15 89058435 89058474 -14436500 - B3A SINE B2 -1 197 165 1 1264 219 36 0 0 chr15 89058474 89058502 -14436472 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1264 777 233 33 113 chr15 89058502 89058632 -14436342 - B3A SINE B2 -34 164 38 1 1264 210 37 0 0 chr15 89058632 89058659 -14436315 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1264 1056 101 0 0 chr15 89058659 89058797 -14436177 - B1_Mus1 SINE Alu -9 139 2 1 1264 420 180 555 0 chr15 89058798 89058926 -14436048 - B3 SINE B2 -17 199 1 1 1264 777 233 33 113 chr15 89058926 89058965 -14436009 - B3A SINE B2 -161 37 3 1 1264 410 278 21 0 chr15 89059740 89059837 -14435137 + MLT1A LTR MaLR 47 145 -229 1 1264 1297 27 0 0 chr15 89059912 89060059 -14434915 - B1_Mus2 SINE Alu 0 147 1 1 1264 1919 63 16 4 chr15 89060059 89060315 -14434659 - L1Md_F2 LINE L1 -2 6580 6322 1 1264 1188 68 0 7 chr15 89060507 89060656 -14434318 - B1_Mus1 SINE Alu 0 148 1 1 1264 472 239 133 0 chr15 89060773 89060886 -14434088 + B1F SINE Alu 1 128 -21 1 1264 590 220 0 41 chr15 89060920 89061043 -14433931 + PB1D9 SINE Alu 2 119 -1 1 1264 824 211 0 0 chr15 89061073 89061215 -14433759 + B1_Mur4 SINE Alu 1 142 -8 1 1264 312 27 0 0 chr15 89061230 89061267 -14433707 + (CAAAC)n Simple_repeat Simple_repeat 2 38 0 1 1264 307 303 67 0 chr15 89062114 89062203 -14432771 - B1_Mus1 SINE Alu -49 99 5 1 1264 361 328 46 46 chr15 89062208 89062403 -14432571 - B3A SINE B2 -3 195 1 1 1264 333 0 0 0 chr15 89062436 89062473 -14432501 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1264 498 222 124 23 chr15 89062488 89062617 -14432357 - B1_Mur1 SINE Alu -7 142 1 1 1264 961 109 0 0 chr15 89062676 89062804 -14432170 + B2_Mm2 SINE B2 2 129 -66 1 1264 219 69 0 0 chr15 89062831 89062860 -14432114 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 1 1264 479 194 28 37 chr15 89062875 89062982 -14431992 + PB1D9 SINE Alu 14 119 -1 1 1264 1222 91 91 0 chr15 89063119 89063295 -14431679 - B2_Mm2 SINE B2 -3 192 1 1 1264 448 255 19 88 chr15 89063334 89063493 -14431481 - B1_Mur3 SINE Alu 0 149 2 1 1264 322 247 43 43 chr15 89063494 89063587 -14431387 - RSINE1 SINE B4 -70 95 3 1 1264 22 35 0 0 chr15 89063687 89063716 -14431258 + AT_rich Low_complexity Low_complexity 1 29 0 1 1264 477 135 157 0 chr15 89063716 89063805 -14431169 - B1_Mur3 SINE Alu -5 144 42 1 1264 222 175 25 0 chr15 89063843 89063883 -14431091 - PB1 SINE Alu -62 65 25 1 1264 246 23 70 0 chr15 89063979 89064022 -14430952 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 1 1264 758 167 8 0 chr15 89064066 89064192 -14430782 - RLTR30 LTR ERV1 0 379 253 2 1264 684 166 166 0 chr15 89064224 89064322 -14430652 - RLTR30 LTR ERV1 -210 169 60 2 1264 983 110 17 11 chr15 89064322 89064497 -14430477 + (CCCCCT)n Simple_repeat Simple_repeat 1 176 0 2 1264 684 166 166 0 chr15 89064497 89064537 -14430437 - RLTR30 LTR ERV1 -320 59 9 2 1264 220 286 0 0 chr15 89064545 89064594 -14430380 - ID SINE ID -146 78 30 2 1264 660 148 8 65 chr15 89064694 89064817 -14430157 - B1_Mur3 SINE Alu -4 145 30 2 1264 515 290 35 70 chr15 89064695 89064925 -14430049 - ID_B1 SINE B4 -2 222 1 2 1264 1326 42 10 77 chr15 89065008 89065061 -14429913 - B2_Mm1a SINE B2 0 193 156 2 1264 189 0 0 0 chr15 89065061 89065082 -14429892 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 2 1264 1326 42 10 77 chr15 89065082 89065235 -14429739 - B2_Mm1a SINE B2 -38 155 2 2 1264 1038 115 0 0 chr15 89065527 89065701 -14429273 + (TC)n Simple_repeat Simple_repeat 1 174 0 2 1264 254 217 159 0 chr15 89065705 89065774 -14429200 - B1F2 SINE Alu -69 80 1 2 1264 217 186 0 85 chr15 89065735 89065782 -14429192 - ID_B1 SINE B4 -104 120 78 2 1264 1396 176 13 4 chr15 89065941 89066180 -14428794 - ORR1C1 LTR MaLR -11 367 127 2 1264 880 179 0 20 chr15 89066181 89066329 -14428645 + B1_Mur2 SINE Alu 1 145 -4 2 1264 210 237 0 17 chr15 89066332 89066392 -14428582 + GA-rich Low_complexity Low_complexity 2 60 0 2 1264 234 0 0 0 chr15 89066425 89066451 -14428523 + (GAAAA)n Simple_repeat Simple_repeat 3 28 0 2 1264 616 197 36 14 chr15 89066451 89066584 -14428390 - ORR1C1 LTR MaLR -236 138 1 2 1264 395 269 28 9 chr15 89066925 89067034 -14427940 - PB1 SINE Alu -12 115 5 2 1264 871 159 0 14 chr15 89067118 89067265 -14427709 - B1_Mur4 SINE Alu 0 150 6 2 1264 374 209 0 147 chr15 89067155 89067284 -14427690 - MT2B LTR ERVL -337 264 155 2 1264 970 149 0 0 chr15 89067613 89067761 -14427213 - B1_Mus1 SINE Alu 0 148 1 2 1264 904 274 42 118 chr15 89067910 89068134 -14426840 - MTE-int LTR MaLR -2 1578 1359 2 1264 1262 20 7 0 chr15 89068134 89068280 -14426694 + B1_Mm SINE Alu 1 147 0 2 1264 904 279 60 118 chr15 89068280 89068458 -14426516 - MTE-int LTR MaLR -222 1358 1030 2 1264 748 207 19 62 chr15 89068443 89068583 -14426391 + RSINE1 SINE B4 8 145 -20 2 1264 279 0 0 0 chr15 89068583 89068614 -14426360 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1264 748 207 19 62 chr15 89068614 89068633 -14426341 + RSINE1 SINE B4 146 160 -5 2 1264 473 319 29 64 chr15 89068663 89068867 -14426107 - MTE-int LTR MaLR -351 1229 1033 2 1264 722 278 46 41 chr15 89068873 89069068 -14425906 - B3A SINE B2 0 198 3 2 1264 306 73 0 0 chr15 89069068 89069109 -14425865 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 2 1264 523 232 0 0 chr15 89069109 89069208 -14425766 - B1F SINE Alu -50 99 1 2 1264 515 333 17 23 chr15 89069208 89069379 -14425595 - MTE-int LTR MaLR -540 1040 871 2 1264 930 206 142 32 chr15 89069362 89069608 -14425366 - MTC LTR MaLR -8 413 141 2 1264 296 319 198 50 chr15 89069587 89070042 -14424932 - MTE-int LTR MaLR -718 862 341 2 1264 229 68 0 43 chr15 89070126 89070172 -14424802 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 2 1264 214 238 0 31 chr15 89070196 89070261 -14424713 + A-rich Low_complexity Low_complexity 3 65 0 2 1264 242 280 27 0 chr15 89070483 89070558 -14424416 - L1_Mur3 LINE L1 -6903 809 733 2 1264 653 217 234 0 chr15 89070733 89070908 -14424066 + B3 SINE B2 1 216 0 2 1264 692 359 34 17 chr15 89070912 89071204 -14423770 - MTE-int LTR MaLR -1239 341 45 2 1264 734 165 63 28 chr15 89071205 89071348 -14423626 + B1_Mur1 SINE Alu 2 149 0 2 1264 509 199 122 0 chr15 89071374 89071505 -14423469 + B1_Mur1 SINE Alu 3 149 0 2 1264 540 243 150 42 chr15 89071564 89071757 -14423217 - B3 SINE B2 -1 215 2 2 1264 296 287 71 44 chr15 89071771 89071884 -14423090 - MTEa LTR MaLR -13 366 251 2 1264 200 146 0 47 chr15 89071904 89071947 -14423027 + GA-rich Low_complexity Low_complexity 4 44 0 2 1264 539 283 40 85 chr15 89071955 89072156 -14422818 - MTEa LTR MaLR -170 209 18 2 1264 522 0 0 0 chr15 89072174 89072232 -14422742 + (TTTTC)n Simple_repeat Simple_repeat 2 59 0 2 1264 591 216 359 18 chr15 89072247 89072538 -14422436 + MTE2b LTR MaLR 8 417 -2 2 1264 498 185 44 44 chr15 89072839 89072952 -14422022 - B1_Mur3 SINE Alu -2 147 35 2 1264 315 0 0 0 chr15 89072952 89072987 -14421987 + (CCCCCA)n Simple_repeat Simple_repeat 1 35 0 2 1264 336 313 12 0 chr15 89072990 89073073 -14421901 - PB1D10 SINE Alu -33 84 1 2 1264 482 275 17 96 chr15 89073307 89073484 -14421490 + RSINE1 SINE B4 3 165 0 2 1264 537 145 57 42 chr15 89073508 89073622 -14421352 - B1_Mur2 SINE Alu -1 148 9 2 1264 344 254 0 0 chr15 89074096 89074159 -14420815 + PB1D7 SINE Alu 4 66 -54 2 1264 1170 62 0 0 chr15 89074160 89074306 -14420668 + B1_Mm SINE Alu 1 146 -1 2 1264 303 28 0 0 chr15 89074308 89074344 -14420630 + (A)n Simple_repeat Simple_repeat 1 36 0 2 1264 238 270 97 13 chr15 89074487 89074641 -14420333 + L1MEd LINE L1 971 1137 -4982 2 1264 378 245 192 6 chr15 89074806 89074962 -14420012 - MTE2b LTR MaLR -194 185 1 2 1264 975 215 18 37 chr15 89074993 89075210 -14419764 - B3 SINE B2 0 216 4 2 1264 724 214 0 0 chr15 89075242 89075368 -14419606 - B1_Mur2 SINE Alu -6 143 18 2 1264 396 302 65 32 chr15 89075406 89075529 -14419445 + PB1 SINE Alu 1 127 0 2 1264 297 328 226 6 chr15 89075659 89075840 -14419134 + ID_B1 SINE B4 1 221 -3 2 1264 1496 58 5 21 chr15 89075892 89076085 -14418889 - B2_Mm1a SINE B2 -3 190 1 2 1264 308 194 178 30 chr15 89076095 89076196 -14418778 - MER34B-int LTR ERV1 -3290 2066 1951 2 1264 271 224 17 0 chr15 89076198 89076256 -14418718 - U6 snRNA snRNA -1 106 48 2 1264 811 159 0 8 chr15 89076460 89076593 -14418381 - B1_Mur2 SINE Alu -1 148 17 2 1264 310 277 51 122 chr15 89076461 89076617 -14418357 - B4A SINE B4 -68 224 80 2 1264 397 235 0 0 chr15 89076617 89076702 -14418272 - L1MD LINE L1 -521 5721 5637 2 1264 511 314 100 62 chr15 89076712 89076960 -14418014 - L1MEe LINE L1 -3638 2508 2248 2 1264 243 0 0 0 chr15 89076960 89076987 -14417987 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 2 1264 693 204 30 0 chr15 89076987 89077119 -14417855 - B1_Mur3 SINE Alu -13 136 1 2 1264 511 314 85 64 chr15 89077119 89077387 -14417587 - L1MEe LINE L1 -3906 2260 1991 2 1264 237 167 0 77 chr15 89077460 89077551 -14417423 + (CATAA)n Simple_repeat Simple_repeat 3 86 0 2 1264 320 116 5 99 chr15 89077562 89077753 -14417221 + (CATAA)n Simple_repeat Simple_repeat 2 174 0 2 1264 320 124 3 101 chr15 89077770 89078061 -14416913 + (CATAA)n Simple_repeat Simple_repeat 1 262 0 2 1264 207 0 0 0 chr15 89078284 89078307 -14416667 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 1264 469 260 0 0 chr15 89078425 89078521 -14416453 - B1_Mur1 SINE Alu -5 144 49 2 1264 797 160 0 0 chr15 89078520 89078639 -14416335 - B1_Mus1 SINE Alu -29 119 1 2 1264 1796 158 145 11 chr15 89078647 89079005 -14415969 + MTD LTR MaLR 6 411 -8 2 1264 360 202 48 0 chr15 89079011 89079095 -14415879 + MTD-int LTR MaLR 5 92 -1166 2 1264 1078 142 71 0 chr15 89079096 89079278 -14415696 + MTB_Mm LTR MaLR 1 195 -212 2 1264 300 26 0 0 chr15 89079278 89079317 -14415657 + B2_Mm2 SINE B2 2 40 -155 2 1264 277 65 43 0 chr15 89079318 89079364 -14415610 + B1_Mur4 SINE Alu 103 150 0 2 1264 1670 11 10 16 chr15 89079366 89079559 -14415415 + B2_Mm1t SINE B2 1 192 -1 2 1264 886 148 184 16 chr15 89079583 89079768 -14415206 + MTB_Mm LTR MaLR 196 411 -8 2 1264 1375 197 44 20 chr15 89079772 89080067 -14414907 + MTD-int LTR MaLR 89 390 -868 2 1264 1145 89 0 0 chr15 89080067 89080213 -14414761 + B1_Mus2 SINE Alu 1 146 -1 2 1264 589 247 158 31 chr15 89080296 89080492 -14414482 + MTB LTR MaLR 180 400 0 2 1264 512 319 64 46 chr15 89080734 89081062 -14413912 - L1M4 LINE L1 -415 5764 5431 2 1264 385 295 0 0 chr15 89081108 89081203 -14413771 - PB1D10 SINE Alu -3 114 20 2 1264 831 160 0 39 chr15 89081250 89081406 -14413568 - B1_Mur4 SINE Alu 0 150 1 2 1264 796 186 14 20 chr15 89081476 89081624 -14413350 - B1_Mur1 SINE Alu 0 149 3 2 1264 432 0 0 0 chr15 89081647 89081695 -14413279 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 1264 584 310 7 14 chr15 89081699 89081843 -14413131 - RSINE1 SINE B4 -19 146 4 2 1264 453 307 38 47 chr15 89081939 89082151 -14412823 - L1M4 LINE L1 -1101 5045 4836 2 1264 611 56 10 82 chr15 89082233 89082330 -14412644 + B2_Mm2 SINE B2 2 91 -104 2 1264 630 196 90 51 chr15 89082309 89082465 -14412509 - B3A SINE B2 -34 164 3 2 1264 522 236 0 98 chr15 89082591 89082713 -14412261 + RSINE1 SINE B4 56 165 0 2 1264 426 190 110 0 chr15 89085372 89085472 -14409502 + B1_Mm SINE Alu 22 132 -15 2 1264 370 317 40 16 chr15 89086425 89086539 -14408435 + ID_B1 SINE B4 92 208 -16 2 1264 363 44 0 0 chr15 89086539 89086584 -14408390 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 2 1264 535 266 37 37 chr15 89086805 89086996 -14407978 - B3A SINE B2 -6 192 2 2 1264 279 250 0 0 chr15 89088051 89088151 -14406823 + (TG)n Simple_repeat Simple_repeat 1 100 0 2 1264 649 110 162 66 chr15 89088424 89088560 -14406414 + B1_Mur4 SINE Alu 2 150 0 2 1264 987 100 7 0 chr15 89088838 89088978 -14405996 - B2_Mm2 SINE B2 -52 143 3 2 1264 180 0 0 0 chr15 89089254 89089274 -14405700 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 2 1264 1163 55 7 0 chr15 89089275 89089420 -14405554 - B1_Mus2 SINE Alu -1 146 1 2 1264 296 237 192 20 chr15 89090163 89090262 -14404712 + PB1D9 SINE Alu 5 120 0 2 1264 873 235 53 14 chr15 89090262 89090469 -14404505 + Lx6 LINE L1 7244 7458 -2 2 1264 1333 228 35 60 chr15 89090622 89090993 -14403981 - MT2B LTR ERVL 0 601 201 2 1264 286 229 205 27 chr15 89091007 89091119 -14403855 - MT2B LTR ERVL -401 132 1 2 1264 993 67 0 0 chr15 89091139 89091273 -14403701 + (TCTCC)n Simple_repeat Simple_repeat 5 138 0 2 1264 482 103 167 33 chr15 89091274 89091364 -14403610 - B1_Mur3 SINE Alu -1 148 47 2 1264 1109 231 147 23 chr15 89091363 89091669 -14403305 - ORR1D1 LTR MaLR -28 346 3 2 1264 4289 45 0 2 chr15 89092002 89092512 -14402462 - L1Md_F2 LINE L1 0 6582 6074 2 1264 208 120 0 39 chr15 89093115 89093167 -14401807 + (TAAA)n Simple_repeat Simple_repeat 4 53 0 2 1264 444 302 152 46 chr15 89093260 89093562 -14401412 - MLT1F2 LTR MaLR -14 546 213 2 1264 313 299 84 60 chr15 89093563 89093613 -14401361 + CYRA11_Mm Unknown Y-chromosome 135 303 -312 2 1264 658 157 70 0 chr15 89093613 89093728 -14401246 - URR1B DNA MER1_type -9 216 94 2 1264 259 299 69 0 chr15 89093785 89093872 -14401102 - MLT1F2 LTR MaLR -462 98 6 2 1264 373 298 86 27 chr15 89093920 89094106 -14400868 - MER21B LTR ERV1 -31 832 636 3 1264 31 44 0 0 chr15 89094970 89095015 -14399959 + AT_rich Low_complexity Low_complexity 1 45 0 3 1264 528 77 24 60 chr15 89096629 89096712 -14398262 - B1_Mur4 SINE Alu 0 150 71 3 1264 737 218 116 11 chr15 89096731 89096921 -14398053 - B3 SINE B2 -6 210 1 3 1264 214 274 146 10 chr15 89098015 89098111 -14396863 + PB1D9 SINE Alu 1 109 -11 3 1264 333 0 0 0 chr15 89098111 89098148 -14396826 + (T)n Simple_repeat Simple_repeat 1 37 0 3 1264 1187 54 7 0 chr15 89098148 89098295 -14396679 - B1_Mur3 SINE Alu 0 149 2 3 1264 312 261 21 144 chr15 89098358 89098546 -14396428 - Lx6 LINE L1 -27 7433 7269 3 1264 326 192 81 14 chr15 89099490 89099564 -14395410 + L2a LINE L2 3268 3346 -80 3 1264 410 325 19 32 chr15 89099617 89099773 -14395201 + RSINE1 SINE B4 2 155 -10 3 1264 539 179 0 10 chr15 89100667 89100763 -14394211 + B1_Mur2 SINE Alu 53 147 -2 3 1264 513 0 0 0 chr15 89100779 89100836 -14394138 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 3 1264 3793 161 95 4 chr15 89100965 89101652 -14393322 + MERVL_2A-int LTR ERVL 4642 5390 -371 3 1264 883 206 67 63 chr15 89101692 89101915 -14393059 - RMER4B LTR ERVK -133 452 229 3 1264 411 21 0 0 chr15 89101915 89101963 -14393011 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 3 1264 261 120 96 39 chr15 89101987 89102039 -14392935 - B2_Mm2 SINE B2 -94 101 47 3 1264 1244 86 17 22 chr15 89102105 89102284 -14392690 - B2_Mm1t SINE B2 -14 179 2 3 1264 443 98 162 71 chr15 89102310 89102409 -14392565 - RMER4B LTR ERVK -358 108 1 3 1264 1266 109 16 0 chr15 89102409 89102601 -14392373 + MERVL_2A-int LTR ERVL 5382 5576 -185 3 1264 610 223 171 3 chr15 89102678 89102837 -14392137 + B3 SINE B2 9 194 -4 3 1264 183 42 0 0 chr15 89102952 89102976 -14391998 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 3 1264 1178 62 7 0 chr15 89102992 89103138 -14391836 - B1_Mus2 SINE Alu 0 147 1 3 1264 407 256 52 78 chr15 89103208 89103399 -14391575 - L1M3 LINE L1 -1720 4420 4235 3 1264 815 176 7 0 chr15 89103402 89103538 -14391436 - B1_Mur1 SINE Alu 0 149 13 3 1264 347 304 180 30 chr15 89104032 89104232 -14390742 + L1M5 LINE L1 2894 3123 -3023 3 1264 581 229 53 67 chr15 89106250 89106400 -14388574 - B1_Mur2 SINE Alu 0 149 2 3 1264 324 209 236 9 chr15 89106406 89106455 -14388519 - B1F SINE Alu -1 148 98 3 1264 1411 66 33 0 chr15 89106455 89106637 -14388337 - B2_Mm2 SINE B2 -6 189 2 3 1264 324 209 236 9 chr15 89106637 89106693 -14388281 - B1F SINE Alu -52 97 21 3 1264 1323 146 14 10 chr15 89106718 89106926 -14388048 - B3 SINE B2 -7 209 1 3 1264 805 197 0 7 chr15 89108686 89108834 -14386140 + B1_Mur2 SINE Alu 3 149 0 3 1264 180 206 90 60 chr15 89114432 89114499 -14380475 - L2 LINE L2 -372 3047 2979 3 1264 698 145 30 8 chr15 89114888 89115020 -14379954 - URR1B DNA MER1_type 0 225 91 3 1264 236 361 46 0 chr15 89115324 89115432 -14379542 - PB1D10 SINE Alu -4 113 1 3 1264 667 203 29 14 chr15 89115754 89115894 -14379080 - B1_Mur1 SINE Alu -5 144 3 3 1264 26 30 0 0 chr15 89116647 89116680 -14378294 + AT_rich Low_complexity Low_complexity 1 33 0 3 1264 252 0 0 0 chr15 89116952 89116980 -14377994 + (T)n Simple_repeat Simple_repeat 1 28 0 3 1264 180 0 0 0 chr15 89117365 89117385 -14377589 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1264 807 241 73 0 chr15 89120493 89120684 -14374290 + B3 SINE B2 1 205 -11 3 1264 393 267 94 51 chr15 89120749 89120887 -14374087 + RSINE1 SINE B4 15 158 -7 3 1264 242 279 32 23 chr15 89121004 89121099 -14373875 + ID_B1 SINE B4 80 169 -123 3 1264 426 232 0 0 chr15 89121025 89121107 -14373867 + PB1D9 SINE Alu 11 92 -28 3 1264 314 318 183 25 chr15 89121118 89121315 -14373659 + L1MEc LINE L1 2152 2379 -4708 3 1264 451 272 17 9 chr15 89121449 89121564 -14373410 + PB1 SINE Alu 1 116 -11 3 1264 1153 56 7 0 chr15 89121749 89121893 -14373081 - B1_Mus2 SINE Alu 0 147 3 3 1264 283 278 118 18 chr15 89121893 89122003 -14372971 + B1_Mm SINE Alu 13 133 -14 3 1264 257 252 67 67 chr15 89122160 89122279 -14372695 + L1MEc LINE L1 2336 2454 -4880 3 1264 356 188 176 0 chr15 89122311 89122396 -14372578 + PB1 SINE Alu 24 123 -4 3 1264 366 289 0 0 chr15 89122427 89122517 -14372457 + BC1_Mm scRNA scRNA 14 103 -49 3 1264 414 69 0 0 chr15 89122683 89122741 -14372233 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 1264 229 242 0 31 chr15 89123473 89123537 -14371437 + MLT1A1 LTR MaLR 318 379 -29 3 1264 369 109 0 0 chr15 89123766 89123821 -14371153 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1264 344 255 163 0 chr15 89125130 89125228 -14369746 + PB1D9 SINE Alu 2 115 -5 3 1264 1087 76 0 0 chr15 89127699 89127830 -14367144 + B1_Mus1 SINE Alu 3 133 -15 3 1264 298 0 23 23 chr15 89127830 89127873 -14367101 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1264 861 181 0 0 chr15 89127887 89128031 -14366943 + B1_Mur3 SINE Alu 2 145 -4 3 1265 237 176 83 56 chr15 89131873 89131945 -14363029 + RLTR20A LTR ERVK 82 155 -386 3 1265 664 195 109 0 chr15 89134748 89134876 -14360098 + B1F SINE Alu 1 142 -7 3 1265 960 123 171 31 chr15 89139797 89139990 -14354984 - URR1A DNA MER1_type -6 220 1 3 1265 474 61 0 0 chr15 89140666 89140732 -14354242 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 1265 1130 59 0 0 chr15 89141852 89141988 -14352986 + B1_Mus1 SINE Alu 1 136 -12 3 1265 306 0 0 0 chr15 89144308 89144342 -14350632 + (TGG)n Simple_repeat Simple_repeat 2 35 0 3 1265 276 267 101 25 chr15 89144641 89144760 -14350214 + MIRb SINE MIR 108 235 -33 3 1265 22 0 0 0 chr15 89146276 89146298 -14348676 + AT_rich Low_complexity Low_complexity 1 22 0 3 1265 553 220 243 6 chr15 89146696 89146865 -14348109 + B3 SINE B2 5 213 -3 3 1265 598 167 150 0 chr15 89146905 89147025 -14347949 + B1_Mus1 SINE Alu 6 143 -5 3 1265 21 0 0 0 chr15 89147030 89147051 -14347923 + AT_rich Low_complexity Low_complexity 1 21 0 3 1265 1449 81 16 0 chr15 89147242 89147428 -14347546 + B2_Mm2 SINE B2 1 189 -6 3 1265 1109 177 4 164 chr15 89148325 89148480 -14346494 + URR1B DNA MER1_type 4 156 -69 3 1265 1263 97 34 6 chr15 89148480 89148656 -14346318 + B2_Mm2 SINE B2 1 181 -14 3 1265 1109 177 4 164 chr15 89148656 89148763 -14346211 + URR1B DNA MER1_type 157 224 -1 3 1265 231 111 0 0 chr15 89149246 89149282 -14345692 + B2_Mm2 SINE B2 3 38 -157 3 1265 426 211 27 63 chr15 89149328 89149439 -14345535 + PB1D10 SINE Alu 9 115 -2 3 1265 449 292 8 24 chr15 89149461 89149584 -14345390 + RSINE1 SINE B4 4 124 -41 3 1265 329 108 73 98 chr15 89149626 89149708 -14345266 + RLTR25B LTR ERVK 430 509 -519 3 1265 815 64 0 0 chr15 89149641 89149751 -14345223 + B1_Mus1 SINE Alu 39 148 0 3 1265 183 42 0 0 chr15 89149765 89149789 -14345185 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1265 911 261 5 0 chr15 89149800 89150003 -14344971 + B3 SINE B2 6 209 -7 3 1265 202 0 48 79 chr15 89150009 89150072 -14344902 + (TTA)n Simple_repeat Simple_repeat 3 63 0 3 1265 322 264 70 108 chr15 89150085 89150112 -14344862 + L1MEg LINE L1 1797 1828 -4256 3 1265 1033 59 96 0 chr15 89150112 89150247 -14344727 + B1_Mus1 SINE Alu 1 148 0 3 1265 322 264 70 108 chr15 89150247 89150267 -14344707 + L1MEg LINE L1 1829 1851 -4233 3 1265 771 241 19 6 chr15 89150267 89150426 -14344548 + RSINE1 SINE B4 3 163 -2 3 1265 322 264 70 108 chr15 89150426 89150460 -14344514 + L1MEg LINE L1 1852 1881 -4203 3 1265 1570 57 10 0 chr15 89150460 89150652 -14344322 + B2_Mm2 SINE B2 2 195 0 3 1265 1043 68 0 114 chr15 89150655 89150821 -14344153 + B1_Mm SINE Alu 1 147 0 3 1265 322 264 70 108 chr15 89150821 89150890 -14344084 + L1MEg LINE L1 1882 1947 -4137 3 1265 432 240 41 10 chr15 89150906 89151003 -14343971 - RSINE1 SINE B4 -63 102 3 3 1265 211 291 12 60 chr15 89151617 89151701 -14343273 - ID4_ SINE ID -1 82 3 3 1265 363 211 109 22 chr15 89151750 89151842 -14343132 - PB1D10 SINE Alu -16 101 2 3 1265 412 319 0 29 chr15 89152516 89152655 -14342319 + ID_B1 SINE B4 87 221 -3 3 1265 410 0 20 0 chr15 89152811 89152861 -14342113 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1265 242 29 29 0 chr15 89155097 89155132 -14339842 + (CCCCAA)n Simple_repeat Simple_repeat 6 41 0 3 1265 431 263 25 58 chr15 89155477 89155598 -14339376 + PB1D10 SINE Alu 1 117 0 3 1265 1122 88 135 0 chr15 89155818 89155988 -14338986 + B2_Mm2 SINE B2 3 195 0 3 1265 566 93 0 11 chr15 89155988 89156075 -14338899 + (GAAA)n Simple_repeat Simple_repeat 4 89 0 3 1265 228 175 69 17 chr15 89156125 89156183 -14338791 + PB1D10 SINE Alu 57 117 0 3 1265 244 312 0 0 chr15 89157695 89157759 -14337215 + ID4 SINE ID 20 83 0 3 1265 332 100 0 0 chr15 89157890 89157940 -14337034 - RLTR15 LTR ERVK -309 50 1 3 1265 1422 81 16 0 chr15 89158027 89158212 -14336762 - B2_Mm2 SINE B2 -7 188 1 3 1265 207 0 0 0 chr15 89158222 89158245 -14336729 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1265 1171 64 0 0 chr15 89158264 89158404 -14336570 - B1_Mus2 SINE Alu -5 142 3 3 1265 547 178 8 48 chr15 89158405 89158529 -14336445 - RLTR18-int LTR ERVK -5 5356 5238 3 1265 1420 58 17 0 chr15 89158565 89158738 -14336236 - B2_Mm2 SINE B2 -18 177 2 3 1265 930 267 79 75 chr15 89158814 89159308 -14335666 - RLTR18-int LTR ERVK -494 4867 4372 3 1265 928 179 11 37 chr15 89159322 89159513 -14335461 + B2_Mm2 SINE B2 2 187 -8 3 1265 1287 41 0 0 chr15 89159521 89159668 -14335306 + B1_Mus2 SINE Alu 1 147 0 3 1265 887 152 0 7 chr15 89159680 89159826 -14335148 + B1_Mm SINE Alu 3 147 0 3 1265 1235 108 28 6 chr15 89159828 89160005 -14334969 + B2_Mm2 SINE B2 1 181 -14 3 1265 1270 112 27 0 chr15 89160036 89160224 -14334750 + B2_Mm1a SINE B2 1 193 0 4 1265 792 219 73 50 chr15 89160226 89160295 -14334679 - RLTR18-int LTR ERVK -978 4383 4308 3 1265 185 94 31 0 chr15 89160295 89160327 -14334647 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 4 1265 991 71 190 25 chr15 89160327 89160485 -14334489 - B2_Mm2 SINE B2 -10 185 2 4 1265 792 219 73 50 chr15 89160485 89160674 -14334300 - RLTR18-int LTR ERVK -1054 4307 4119 3 1265 1214 68 0 0 chr15 89160706 89160853 -14334121 + B1_Mus1 SINE Alu 1 147 -1 4 1265 198 0 0 0 chr15 89160853 89160875 -14334099 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 4 1265 423 152 131 82 chr15 89161050 89161157 -14333817 + B1_Mur4 SINE Alu 22 136 -14 4 1265 331 21 42 0 chr15 89161157 89161205 -14333769 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 4 1265 423 152 131 82 chr15 89161205 89161219 -14333755 + B1_Mur4 SINE Alu 137 149 -1 4 1265 301 60 20 20 chr15 89161263 89161314 -14333660 - B1_Mm SINE Alu 0 147 97 4 1265 1252 118 16 11 chr15 89161401 89161590 -14333384 - B2_Mm2 SINE B2 -3 192 3 4 1265 318 176 40 0 chr15 89161590 89161664 -14333310 - RLTR42-int LTR ERVK -3406 2116 2040 4 1265 885 67 0 0 chr15 89161703 89161822 -14333152 - B1_Mm SINE Alu -27 120 2 4 1265 430 231 12 96 chr15 89161822 89161871 -14333103 - MT2B LTR ERVL -428 156 116 4 1265 282 137 19 19 chr15 89161886 89161938 -14333036 - RLTR42-int LTR ERVK -3674 1848 1797 4 1265 1449 80 11 0 chr15 89162102 89162289 -14332685 - B2_Mm1t SINE B2 -3 190 2 4 1265 795 58 0 0 chr15 89162669 89162773 -14332201 - B2_Mm2 SINE B2 -90 105 2 4 1265 506 107 0 0 chr15 89162811 89162886 -14332088 - BC1_Mm scRNA scRNA -76 76 2 4 1265 529 188 23 99 chr15 89162886 89162915 -14332059 - RLTR18-int LTR ERVK -2027 3334 3315 3 1265 1206 56 0 0 chr15 89162915 89163059 -14331915 + B1_Mus1 SINE Alu 2 145 -3 4 1265 186 43 0 0 chr15 89163059 89163082 -14331892 + (GAA)n Simple_repeat Simple_repeat 2 24 0 4 1265 529 188 23 99 chr15 89163082 89163222 -14331752 - RLTR18-int LTR ERVK -2047 3314 3178 3 1265 906 219 16 10 chr15 89163216 89163410 -14331564 - RLTR18-int LTR ERVK -2359 3002 2808 3 1265 338 268 68 101 chr15 89163401 89163638 -14331336 - RLTR18-int LTR ERVK -2685 2676 2448 3 1265 198 0 0 0 chr15 89163820 89163842 -14331132 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 4 1265 833 124 15 0 chr15 89163856 89163993 -14330981 - B1_Mus1 SINE Alu -2 146 8 4 1265 1914 195 172 91 chr15 89164078 89164648 -14330326 - RLTR18 LTR ERVK 0 616 1 4 1265 318 26 0 0 chr15 89167544 89167583 -14327391 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1265 1312 97 11 0 chr15 89167843 89168019 -14326955 - B2_Mm1t SINE B2 -14 179 2 4 1265 668 160 22 22 chr15 89168019 89168153 -14326821 + B1_Mus1 SINE Alu 14 147 -1 4 1265 1211 49 7 0 chr15 89168348 89168492 -14326482 + B1_Mus2 SINE Alu 2 146 -1 4 1265 3490 37 107 0 chr15 89168583 89169012 -14325962 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1265 338 229 16 53 chr15 89169401 89169488 -14325486 - ID2 SINE ID -48 104 13 4 1265 1422 94 11 0 chr15 89169526 89169717 -14325257 + B2_Mm1t SINE B2 1 193 0 4 1265 333 348 36 0 chr15 89169727 89169839 -14325135 + PB1D7 SINE Alu 3 118 -2 4 1265 180 0 0 0 chr15 89169866 89169886 -14325088 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 4 1265 386 256 60 0 chr15 89169919 89170052 -14324922 + L1M3 LINE L1 4412 4552 -1588 4 1265 234 246 0 62 chr15 89170064 89170129 -14324845 + ID_B1 SINE B4 98 158 -66 4 1265 717 186 0 0 chr15 89170135 89170259 -14324715 + B1_Mur4 SINE Alu 22 145 -5 4 1265 189 0 0 0 chr15 89170363 89170384 -14324590 + (CCA)n Simple_repeat Simple_repeat 1 21 0 4 1265 1039 78 0 22 chr15 89170419 89170602 -14324372 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 1265 710 253 0 38 chr15 89170602 89170762 -14324212 + RSINE1 SINE B4 12 165 0 4 1265 237 211 30 50 chr15 89170767 89170867 -14324107 + L1M3 LINE L1 5124 5221 -922 4 1265 817 236 16 38 chr15 89170934 89171119 -14323855 + B3A SINE B2 2 182 -16 4 1265 495 202 0 23 chr15 89171120 89171252 -14323722 + (CA)n Simple_repeat Simple_repeat 2 130 0 4 1265 2002 251 42 43 chr15 89171252 89172200 -14322774 - Lx6 LINE L1 -30 7430 6210 4 1265 237 309 15 0 chr15 89172202 89172270 -14322704 + B3 SINE B2 102 170 -46 4 1265 504 48 0 0 chr15 89172284 89172347 -14322627 + (GA)n Simple_repeat Simple_repeat 1 63 0 4 1265 246 266 11 122 chr15 89172350 89172440 -14322534 + ID4_ SINE ID 4 83 0 4 1265 349 272 0 36 chr15 89172485 89172569 -14322405 + PB1 SINE Alu 28 108 -19 4 1265 273 140 0 39 chr15 89172590 89172642 -14322332 + L1M3 LINE L1 5358 5407 -884 4 1265 227 319 14 0 chr15 89172672 89172744 -14322230 + ID2 SINE ID 7 79 -4 4 1265 248 137 39 0 chr15 89172750 89172801 -14322173 + L1M2 LINE L1 5422 5474 -838 4 1265 635 156 489 0 chr15 89172819 89172960 -14322014 + B3 SINE B2 1 210 -6 4 1265 1952 187 108 80 chr15 89172973 89173450 -14321524 + Lx9 LINE L1 7028 7519 -125 4 1265 231 61 0 0 chr15 89173450 89173483 -14321491 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1265 1952 187 108 80 chr15 89173483 89173605 -14321369 + Lx9 LINE L1 7520 7643 -1 4 1265 1098 36 0 0 chr15 89173612 89173750 -14321224 + B1_Mus2 SINE Alu 10 147 0 4 1265 318 20 19 38 chr15 89173750 89173803 -14321171 + (CAAA)n Simple_repeat Simple_repeat 2 53 0 4 1265 1205 75 98 0 chr15 89173870 89174044 -14320930 - B2_Mm2 SINE B2 0 195 5 4 1265 1061 117 0 0 chr15 89174055 89174200 -14320774 - B1_Mur4 SINE Alu -5 145 1 4 1265 244 231 0 0 chr15 89174203 89174255 -14320719 + L1M2 LINE L1 5528 5579 -712 4 1265 412 103 51 17 chr15 89174280 89174398 -14320576 + (TA)n Simple_repeat Simple_repeat 2 123 0 4 1265 320 64 21 0 chr15 89174414 89174461 -14320513 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 4 1265 1123 103 0 0 chr15 89174461 89174607 -14320367 - B1_Mus2 SINE Alu 0 147 2 4 1265 369 0 0 0 chr15 89174707 89174748 -14320226 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1265 25 0 0 0 chr15 89174773 89174798 -14320176 + AT_rich Low_complexity Low_complexity 1 25 0 4 1265 253 254 0 0 chr15 89174839 89174898 -14320076 + B1F SINE Alu 1 59 -90 4 1265 26 0 0 0 chr15 89174898 89174924 -14320050 + AT_rich Low_complexity Low_complexity 1 26 0 4 1265 3040 25 50 6 chr15 89174976 89175339 -14319635 - L1Md_F2 LINE L1 -2 6580 6202 4 1265 290 292 0 53 chr15 89175384 89175478 -14319496 - PB1D7 SINE Alu 0 120 32 4 1265 297 263 15 130 chr15 89175510 89175641 -14319333 - PB1D10 SINE Alu -1 116 1 4 1265 273 89 0 0 chr15 89175642 89175687 -14319287 + (T)n Simple_repeat Simple_repeat 1 45 0 4 1265 1159 68 7 0 chr15 89175691 89175837 -14319137 - B1_Mus2 SINE Alu 0 147 1 4 1265 306 0 0 0 chr15 89175857 89175891 -14319083 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1265 261 338 190 6 chr15 89175951 89176109 -14318865 - B4A SINE B4 -4 288 102 4 1265 1101 102 0 0 chr15 89176180 89176327 -14318647 - B1_Mus2 SINE Alu 0 147 1 4 1265 436 204 11 21 chr15 89176414 89176509 -14318465 - PB1D9 SINE Alu -17 103 10 4 1265 229 226 32 116 chr15 89176433 89176528 -14318446 - B4 SINE B4 -123 169 83 4 1265 405 0 0 0 chr15 89176679 89176724 -14318250 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 4 1265 1214 73 0 0 chr15 89176858 89177022 -14317952 + B2_Mm2 SINE B2 1 164 -31 4 1265 370 229 113 9 chr15 89177046 89177152 -14317822 + ID_B1 SINE B4 108 224 0 4 1265 213 39 0 0 chr15 89177249 89177275 -14317699 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1265 349 250 88 40 chr15 89177469 89177594 -14317380 - MLT1D LTR MaLR -331 174 44 4 1265 662 186 154 65 chr15 89177596 89177753 -14317221 + URR1A DNA MER1_type 3 186 -40 4 1265 779 185 13 33 chr15 89177753 89177904 -14317070 + B1_Mus1 SINE Alu 1 148 0 4 1265 662 186 154 65 chr15 89177904 89177947 -14317027 + URR1A DNA MER1_type 187 221 -5 4 1265 237 254 32 0 chr15 89178069 89178132 -14316842 - L1MC3 LINE L1 -981 6804 6740 4 1265 345 330 32 0 chr15 89178221 89178315 -14316659 - B1F SINE Alu -52 97 1 4 1265 541 175 158 0 chr15 89179031 89179151 -14315823 + B1F SINE Alu 1 139 -10 4 1265 423 0 0 0 chr15 89179151 89179198 -14315776 + (CCAA)n Simple_repeat Simple_repeat 2 48 0 4 1265 276 286 50 30 chr15 89179274 89179339 -14315635 + PB1D9 SINE Alu 11 79 -41 4 1265 1588 22 39 0 chr15 89179339 89179521 -14315453 + B2_Mm1a SINE B2 3 191 -2 4 1265 276 286 50 30 chr15 89179521 89179556 -14315418 + PB1D9 SINE Alu 80 113 -7 4 1265 296 258 268 0 chr15 89179713 89179824 -14315150 + L1MB4 LINE L1 5813 5947 -233 4 1265 615 62 0 0 chr15 89179824 89179904 -14315070 + (GAAA)n Simple_repeat Simple_repeat 2 81 0 4 1265 296 258 268 0 chr15 89179904 89179990 -14314984 + L1MB4 LINE L1 5948 6062 -118 4 1265 1545 58 0 5 chr15 89180024 89180213 -14314761 + B2_Mm1a SINE B2 2 189 -4 4 1265 423 319 90 6 chr15 89180232 89180399 -14314575 + B3A SINE B2 18 198 0 4 1265 663 147 52 9 chr15 89180418 89180589 -14314385 + B3 SINE B2 1 191 -4 4 1265 368 322 0 11 chr15 89180596 89180690 -14314284 + B4A SINE B4 1 93 -199 4 1265 992 144 0 20 chr15 89180692 89180841 -14314133 + B1_Mus2 SINE Alu 1 146 -1 4 1265 233 125 18 0 chr15 89180842 89180898 -14314076 + (CAAAA)n Simple_repeat Simple_repeat 3 59 0 4 1265 297 317 29 0 chr15 89180919 89181023 -14313951 + B4A SINE B4 82 188 -104 4 1265 210 71 0 0 chr15 89182757 89182785 -14312189 + (CAGCC)n Simple_repeat Simple_repeat 4 31 0 4 1265 254 242 60 0 chr15 89186670 89186746 -14308228 - ID4_ SINE ID -59 93 15 4 1265 992 249 0 0 chr15 89187834 89188027 -14306947 + B3 SINE B2 5 197 -19 4 1265 593 245 23 130 chr15 89188057 89188273 -14306701 + B3A SINE B2 2 194 -4 4 1265 291 319 136 12 chr15 89188276 89188438 -14306536 + L2a LINE L2 3240 3421 -5 4 1265 1384 96 16 0 chr15 89188444 89188631 -14306343 - B2_Mm2 SINE B2 -4 191 2 4 1265 357 225 111 57 chr15 89188797 89188814 -14306160 + B1F SINE Alu 3 72 -77 4 1265 492 213 65 0 chr15 89188814 89188922 -14306052 + ID_B1 SINE B4 100 214 -10 4 1265 357 225 111 57 chr15 89188922 89188938 -14306036 + B1F SINE Alu 73 149 0 4 1265 191 36 36 0 chr15 89190028 89190056 -14304918 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 4 1265 382 210 114 48 chr15 89190660 89190765 -14304209 - PB1D10 SINE Alu -5 112 1 4 1265 808 272 9 48 chr15 89191023 89191251 -14303723 - ID_B1 SINE B4 -3 221 3 4 1265 231 61 0 0 chr15 89191257 89191290 -14303684 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 5 1265 1174 82 0 0 chr15 89191291 89191437 -14303537 - B1_Mus1 SINE Alu -1 147 2 5 1265 532 271 15 8 chr15 89191448 89191582 -14303392 - ID_B1 SINE B4 -6 218 84 5 1265 749 302 94 8 chr15 89191613 89191867 -14303107 + B4A SINE B4 11 286 -6 5 1265 288 307 0 13 chr15 89191940 89192016 -14302958 + ID4 SINE ID 4 78 -5 5 1265 512 211 100 9 chr15 89192223 89192333 -14302641 + PB1D9 SINE Alu 1 120 0 5 1265 198 0 0 0 chr15 89192655 89192677 -14302297 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 5 1265 966 75 104 0 chr15 89192684 89192818 -14302156 - B1_Mus1 SINE Alu 0 148 1 5 1265 752 287 53 49 chr15 89192858 89193122 -14301852 - B4A SINE B4 0 292 28 5 1265 378 0 0 0 chr15 89193126 89193168 -14301806 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1265 677 204 52 7 chr15 89193173 89193326 -14301648 - B3A SINE B2 -38 160 1 5 1265 285 289 24 0 chr15 89193381 89193464 -14301510 - PB1D10 SINE Alu -5 112 28 5 1265 281 343 28 9 chr15 89193511 89193620 -14301354 - PB1D10 SINE Alu 0 117 7 5 1265 400 299 39 16 chr15 89196308 89196437 -14298537 + B3A SINE B2 4 135 -63 5 1265 428 259 44 9 chr15 89196485 89196598 -14298376 + PB1D10 SINE Alu 1 117 0 5 1265 449 314 106 23 chr15 89196611 89196875 -14298099 + B4A SINE B4 2 287 -5 5 1265 450 223 61 0 chr15 89197028 89197147 -14297827 - PB1D7 SINE Alu -20 129 1 5 1265 428 305 28 51 chr15 89197147 89197231 -14297743 - ID SINE ID -141 83 4 5 1265 189 0 0 0 chr15 89197238 89197259 -14297715 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 5 1265 1353 68 38 33 chr15 89197259 89197442 -14297532 - B2_Mm2 SINE B2 -10 185 2 5 1265 982 237 256 9 chr15 89197573 89197913 -14297061 - RMER15-int LTR ERVL -3624 1375 952 5 1265 204 67 0 0 chr15 89197916 89197946 -14297028 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 5 1265 1079 86 26 0 chr15 89197946 89198097 -14296877 - B2_Mm2 SINE B2 -40 155 1 5 1265 1681 274 91 18 chr15 89198150 89198976 -14295998 - RMER15-int LTR ERVL -4108 891 6 5 1265 857 242 125 21 chr15 89199041 89199328 -14295646 - RMER15 LTR ERVL -232 343 27 5 1265 543 152 326 0 chr15 89199341 89199479 -14295495 + URR1A DNA MER1_type 1 183 -43 5 1265 207 0 0 0 chr15 89206156 89206179 -14288795 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1265 1244 48 0 0 chr15 89206179 89206326 -14288648 - B1_Mus2 SINE Alu 0 147 1 5 1265 356 262 81 36 chr15 89208361 89208472 -14286502 - PB1D10 SINE Alu 0 117 2 5 1265 323 331 161 29 chr15 89210387 89210667 -14284307 + L1M5 LINE L1 2844 3160 -2986 5 1265 316 277 38 47 chr15 89210877 89210983 -14283991 + B1_Mur2 SINE Alu 1 105 -44 5 1265 913 296 78 20 chr15 89210989 89211389 -14283585 - L1_Rod LINE L1 -1654 4193 3771 5 1265 734 102 51 0 chr15 89211397 89211515 -14283459 - B1_Mus1 SINE Alu 0 148 25 5 1265 315 316 17 134 chr15 89211523 89211636 -14283338 - L1M2 LINE L1 -2880 3263 3171 5 1265 995 206 32 32 chr15 89211636 89211852 -14283122 - B3 SINE B2 0 216 1 5 1265 315 316 17 134 chr15 89211852 89211917 -14283057 - L1M2 LINE L1 -2973 3170 3106 5 1265 552 68 0 0 chr15 89211919 89211992 -14282982 + (TC)n Simple_repeat Simple_repeat 2 74 0 5 1265 1388 99 11 0 chr15 89211992 89212183 -14282791 - B2_Mm1t SINE B2 0 193 1 5 1265 900 163 7 7 chr15 89212191 89212339 -14282635 - B1_Mur2 SINE Alu 0 149 2 5 1265 1180 117 11 16 chr15 89212900 89213091 -14281883 + URR1A DNA MER1_type 37 226 0 5 1265 1311 106 32 11 chr15 89213761 89213951 -14281023 - B2_Mm2 SINE B2 0 195 2 5 1265 270 0 0 0 chr15 89214431 89214461 -14280513 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1265 1275 41 0 0 chr15 89214461 89214608 -14280366 - B1_Mus2 SINE Alu 0 147 1 5 1265 356 338 23 0 chr15 89216877 89217010 -14277964 + (CCCCAG)n Simple_repeat Simple_repeat 3 138 0 5 1265 210 299 0 0 chr15 89217016 89217150 -14277824 + (CCCCAA)n Simple_repeat Simple_repeat 4 137 0 5 1265 213 264 0 0 chr15 89217158 89217211 -14277763 + (CCCCAG)n Simple_repeat Simple_repeat 2 54 0 5 1265 1248 189 9 9 chr15 89220050 89220264 -14274710 + B3 SINE B2 1 214 -2 5 1265 365 321 49 28 chr15 89220304 89220448 -14274526 - RSINE1 SINE B4 -17 148 2 5 1265 601 151 58 12 chr15 89222275 89222397 -14272577 - ORR1C2 LTR MaLR 0 384 240 5 1265 521 248 9 9 chr15 89222580 89222690 -14272284 - ID_B1 SINE B4 -1 223 114 5 1265 396 0 0 0 chr15 89222691 89222735 -14272239 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1265 671 95 0 9 chr15 89223107 89223213 -14271761 + (GGA)n Simple_repeat Simple_repeat 1 105 0 5 1265 520 323 74 10 chr15 89223217 89223420 -14271554 + MLT1F1 LTR MaLR 309 524 -45 5 1265 247 360 23 23 chr15 89223465 89223593 -14271381 + MLT1F1-int LTR MaLR 14 141 -1348 5 1265 204 292 43 58 chr15 89223757 89223874 -14271100 + MIRb SINE MIR 121 234 -28 5 1265 301 148 19 0 chr15 89224042 89224096 -14270878 + PB1D9 SINE Alu 1 55 -65 5 1265 239 54 27 0 chr15 89224098 89224135 -14270839 + (CGGGGG)n Simple_repeat Simple_repeat 1 38 0 5 1265 201 268 0 0 chr15 89224392 89224448 -14270526 + A-rich Low_complexity Low_complexity 1 56 0 5 1265 530 198 35 18 chr15 89224546 89224659 -14270315 + PB1D7 SINE Alu 2 116 -4 5 1265 221 273 35 35 chr15 89224713 89224770 -14270204 + BC1_Mm scRNA scRNA 29 85 -67 5 1265 583 204 19 0 chr15 89225041 89225149 -14269825 + PB1D9 SINE Alu 2 111 -9 5 1265 1220 14 0 0 chr15 89225223 89225368 -14269606 + L1Md_A LINE L1 6438 6582 0 5 1265 581 239 37 15 chr15 89225376 89225512 -14269462 + B1_Mur1 SINE Alu 11 149 0 5 1265 614 171 0 8 chr15 89225512 89225636 -14269338 + GA-rich Low_complexity Low_complexity 2 124 0 5 1265 928 27 0 0 chr15 89225831 89225943 -14269031 + B1_Mus1 SINE Alu 35 146 -2 5 1265 261 0 0 0 chr15 89225943 89225972 -14269002 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 5 1265 933 153 0 7 chr15 89226467 89226605 -14268369 - B1_Mur4 SINE Alu -13 137 1 5 1265 614 287 6 31 chr15 89226797 89226959 -14268015 - RSINE1 SINE B4 -5 160 3 5 1265 21 0 0 0 chr15 89227075 89227096 -14267878 + AT_rich Low_complexity Low_complexity 1 21 0 5 1265 588 167 0 29 chr15 89227099 89227204 -14267770 - B1_Mus2 SINE Alu 0 147 46 5 1265 210 299 101 20 chr15 89227490 89227589 -14267385 - L2c LINE L2 -39 3348 3242 5 1265 1315 85 37 16 chr15 89228035 89228226 -14266748 - B2_Mm2 SINE B2 0 195 1 5 1265 356 269 109 18 chr15 89228254 89228364 -14266610 + MTD LTR MaLR 1 120 -299 5 1265 591 53 0 0 chr15 89228368 89228443 -14266531 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 5 1265 29 0 0 0 chr15 89228451 89228480 -14266494 + AT_rich Low_complexity Low_complexity 1 29 0 5 1265 817 216 105 30 chr15 89228486 89228686 -14266288 - B3 SINE B2 0 216 2 5 1265 771 260 32 46 chr15 89228692 89228910 -14266064 - B3 SINE B2 0 216 2 5 1265 1001 108 7 7 chr15 89228961 89229101 -14265873 - B1_Mus1 SINE Alu -7 141 2 5 1265 1103 214 88 48 chr15 89229104 89229354 -14265620 + MTD LTR MaLR 121 380 -39 5 1265 328 228 98 10 chr15 89229385 89229418 -14265556 - PB1D10 SINE Alu -4 113 3 5 1265 342 174 72 0 chr15 89229418 89229487 -14265487 - ID_B1 SINE B4 -67 157 84 5 1265 345 24 0 0 chr15 89229637 89229679 -14265295 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 5 1265 477 106 0 0 chr15 89229697 89229763 -14265211 - B1_Mus1 SINE Alu -81 67 2 5 1265 347 264 128 16 chr15 89229763 89229826 -14265148 - B4A SINE B4 -207 85 5 5 1265 183 259 129 0 chr15 89230202 89230287 -14264687 - L2c LINE L2 -852 2567 2472 5 1265 1087 82 0 0 chr15 89230494 89230628 -14264346 - B1_Mus1 SINE Alu -13 135 2 5 1265 1088 253 117 63 chr15 89231025 89231375 -14263599 - MTE-int LTR MaLR -521 1059 691 5 1265 1160 239 131 17 chr15 89231380 89231678 -14263296 - MTE-int LTR MaLR -1174 406 75 5 1265 492 286 8 16 chr15 89231699 89231820 -14263154 + RSINE1 SINE B4 9 128 -37 5 1265 344 22 22 0 chr15 89231824 89231869 -14263105 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 1265 180 0 0 0 chr15 89231869 89231888 -14263086 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 1265 250 98 39 0 chr15 89231893 89231944 -14263030 + (TA)n Simple_repeat Simple_repeat 1 53 0 5 1265 565 277 15 37 chr15 89232066 89232201 -14262773 - ID_B1 SINE B4 0 224 93 5 1265 251 282 169 0 chr15 89232140 89232211 -14262763 - 7SLRNA srpRNA srpRNA -231 83 1 5 1265 504 288 14 54 chr15 89232239 89232386 -14262588 + ID_B1 SINE B4 84 224 0 5 1265 1286 205 83 21 chr15 89232398 89232764 -14262210 + Lx9 LINE L1 5502 5919 -1777 5 1265 1048 198 33 269 chr15 89232768 89233258 -14261716 - ORR1B1 LTR MaLR 0 394 1 5 1265 667 173 18 0 chr15 89233312 89233422 -14261552 + B1_Mur1 SINE Alu 30 141 -8 5 1265 1183 216 79 40 chr15 89233484 89233585 -14261389 + Lx9 LINE L1 6090 6259 -1385 5 1265 201 94 0 0 chr15 89233585 89233617 -14261357 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 5 1265 1562 301 36 19 chr15 89233617 89234180 -14260794 + Lx9 LINE L1 6172 6847 -797 5 1265 384 276 19 0 chr15 89234219 89234324 -14260650 + Lx9 LINE L1 6860 6966 -678 5 1265 2164 174 81 3 chr15 89234436 89234821 -14260153 + MTD LTR MaLR 2 416 -3 5 1265 240 295 48 14 chr15 89234927 89235009 -14259965 + PB1D7 SINE Alu 7 92 -28 5 1265 191 61 0 29 chr15 89235085 89235119 -14259855 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 5 1265 569 300 143 3 chr15 89235245 89235546 -14259428 - L2a LINE L2 -10 3416 3074 5 1265 1686 218 75 32 chr15 89236190 89236631 -14258343 + RLTR11A2 LTR ERVK 1 460 -67 5 1265 912 157 13 9 chr15 89236635 89236854 -14258120 + CT-rich Low_complexity Low_complexity 1 219 0 5 1265 212 147 0 0 chr15 89236854 89236888 -14258086 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 5 1265 2159 116 57 60 chr15 89237014 89237399 -14257575 - ORR1C2 LTR MaLR 0 384 1 5 1265 4221 201 148 75 chr15 89237399 89238374 -14256600 - ORR1C2-int LTR MaLR 0 1370 323 5 1265 369 0 0 0 chr15 89238374 89238415 -14256559 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 6 1265 4221 201 148 75 chr15 89238415 89238563 -14256411 - ORR1C2-int LTR MaLR -1048 322 167 5 1265 1151 71 0 0 chr15 89238563 89238704 -14256270 + B1_Mus1 SINE Alu 2 142 -6 6 1265 428 0 0 19 chr15 89238707 89238760 -14256214 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 6 1265 4221 201 148 75 chr15 89238760 89238907 -14256067 - ORR1C2-int LTR MaLR -1204 166 1 5 1265 1853 150 93 52 chr15 89238909 89239275 -14255699 - ORR1C2 LTR MaLR -2 382 2 5 1265 372 245 67 84 chr15 89239654 89239832 -14255142 + MT2B LTR ERVL 104 278 -323 6 1265 932 104 15 0 chr15 89239717 89239851 -14255123 + B1_Mur3 SINE Alu 6 141 -8 6 1265 282 56 0 0 chr15 89239896 89239932 -14255042 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 6 1265 1092 95 7 7 chr15 89239950 89240098 -14254876 + B1_Mus1 SINE Alu 1 148 0 6 1265 264 292 115 0 chr15 89240991 89241087 -14253887 + L2b LINE L2 3262 3368 -7 6 1265 780 66 359 62 chr15 89241430 89241575 -14253399 + B2_Mm1t SINE B2 1 188 -5 6 1265 734 141 78 8 chr15 89241595 89241724 -14253250 + B1_Mus1 SINE Alu 11 148 0 6 1265 224 186 271 0 chr15 89241827 89241886 -14253088 + B3 SINE B2 43 117 -99 6 1265 306 189 0 0 chr15 89242027 89242080 -14252894 - B4 SINE B4 -220 72 20 6 1265 234 0 0 0 chr15 89242091 89242117 -14252857 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 1265 1124 37 8 0 chr15 89242218 89242352 -14252622 - B1_Mm SINE Alu -12 135 1 6 1265 633 186 0 0 chr15 89242375 89242499 -14252475 + GA-rich Low_complexity Low_complexity 3 126 0 6 1265 342 0 0 0 chr15 89242501 89242539 -14252435 + (CAGG)n Simple_repeat Simple_repeat 4 41 0 6 1265 1111 98 81 6 chr15 89242539 89242713 -14252261 + B2_Mm1t SINE B2 6 192 -1 6 1265 269 89 0 22 chr15 89242714 89242760 -14252214 + (GAAA)n Simple_repeat Simple_repeat 4 48 0 6 1265 4335 167 72 41 chr15 89242941 89243873 -14251101 + RLTR25B LTR ERVK 68 1028 0 6 1265 195 100 0 0 chr15 89243898 89243928 -14251046 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 6 1265 1038 113 7 0 chr15 89243930 89244072 -14250902 - B1_Mur4 SINE Alu -7 143 1 6 1265 388 345 16 10 chr15 89244227 89244354 -14250620 - ID_B1 SINE B4 -165 127 2 6 1265 21 0 0 0 chr15 89244417 89244438 -14250536 + AT_rich Low_complexity Low_complexity 1 21 0 6 1265 520 269 180 98 chr15 89244596 89244639 -14250335 + B3 SINE B2 1 40 -176 6 1265 1430 108 0 5 chr15 89244639 89244835 -14250139 - B2_Mm2 SINE B2 0 195 1 6 1265 520 269 180 98 chr15 89244835 89244985 -14249989 + B3 SINE B2 41 210 -6 6 1265 1320 79 84 0 chr15 89245363 89245380 -14249594 - B2_Mm1t SINE B2 0 193 177 6 1265 222 37 0 0 chr15 89245380 89245407 -14249567 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 6 1265 1320 79 84 0 chr15 89245407 89245567 -14249407 - B2_Mm1t SINE B2 -17 176 2 6 1265 181 330 161 51 chr15 89245824 89245942 -14249032 + L2b LINE L2 3238 3368 -7 6 1265 342 261 33 22 chr15 89246220 89246310 -14248664 - PB1D7 SINE Alu 0 120 30 6 1265 1493 39 66 0 chr15 89246405 89246567 -14248407 + B2_Mm1t SINE B2 1 174 -19 6 1265 189 0 0 0 chr15 89246567 89246588 -14248386 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 6 1265 1493 39 66 0 chr15 89246588 89246606 -14248368 + B2_Mm1t SINE B2 175 192 -1 6 1265 627 228 88 7 chr15 89248470 89248607 -14246367 + B1F2 SINE Alu 1 148 -1 6 1265 814 126 23 8 chr15 89248637 89248765 -14246209 + B1_Mus1 SINE Alu 12 141 -7 6 1265 290 115 0 16 chr15 89248765 89248827 -14246147 + (CCAA)n Simple_repeat Simple_repeat 4 64 0 6 1265 188 211 34 34 chr15 89248993 89249052 -14245922 + L2a LINE L2 3209 3267 -159 6 1265 505 245 87 47 chr15 89249908 89250108 -14244866 + RLTR9E LTR ERVK 200 383 0 6 1265 1346 84 21 16 chr15 89250748 89250941 -14244033 - B2_Mm2 SINE B2 -1 194 1 6 1265 1092 124 0 0 chr15 89251344 89251522 -14243452 + (TA)n Simple_repeat Simple_repeat 1 178 0 6 1265 198 98 59 0 chr15 89252089 89252140 -14242834 + T-rich Low_complexity Low_complexity 1 54 0 6 1265 1170 97 43 5 chr15 89253112 89253320 -14241654 + L1_Mus3 LINE L1 6376 6591 -47 6 1265 231 260 0 39 chr15 89255805 89255944 -14239030 + (CCCCG)n Simple_repeat Simple_repeat 1 133 0 6 1265 275 80 0 39 chr15 89257520 89257572 -14237402 + (TTTTG)n Simple_repeat Simple_repeat 1 50 0 6 1265 961 47 123 8 chr15 89257572 89257702 -14237272 - B1_Mus1 SINE Alu -2 146 2 6 1266 1276 106 5 22 chr15 89260922 89261106 -14233868 + B2_Mm2 SINE B2 1 181 -14 6 1266 1490 54 32 0 chr15 89261126 89261312 -14233662 + B2_Mm1t SINE B2 1 192 -1 6 1266 306 0 0 0 chr15 89261341 89261375 -14233599 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1266 463 221 10 40 chr15 89261391 89261490 -14233484 + B1F1 SINE Alu 33 128 -21 6 1266 221 100 0 0 chr15 89261757 89261787 -14233187 + B1_Mus1 SINE Alu 23 52 -96 6 1266 248 311 27 64 chr15 89261824 89261934 -14233040 - RMER30 DNA MER1_type -96 106 1 6 1266 710 240 121 34 chr15 89262165 89262372 -14232602 + RCHARR1 DNA MER1_type 3 227 -747 6 1266 593 251 66 33 chr15 89262543 89262724 -14232250 + RCHARR1 DNA MER1_type 555 741 -233 6 1266 621 231 0 39 chr15 89262740 89262893 -14232081 - B1_Mus1 SINE Alu 0 148 2 6 1266 226 259 105 12 chr15 89262893 89262970 -14232004 + RCHARR1 DNA MER1_type 726 811 -163 6 1266 389 208 77 45 chr15 89263009 89263165 -14231809 + RCHARR1 DNA MER1_type 814 974 0 6 1266 180 0 0 0 chr15 89263239 89263259 -14231715 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 6 1266 237 65 0 0 chr15 89263476 89263507 -14231467 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1266 189 132 0 0 chr15 89263997 89264035 -14230939 + (G)n Simple_repeat Simple_repeat 1 38 0 6 1266 195 42 0 0 chr15 89264119 89264143 -14230831 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1266 759 164 112 0 chr15 89264210 89264344 -14230630 + B1_Mur2 SINE Alu 1 149 0 6 1266 226 67 0 0 chr15 89264379 89264409 -14230565 + ORR1C2 LTR MaLR 1 30 -354 6 1266 1425 88 16 0 chr15 89264410 89264602 -14230372 + B2_Mm2 SINE B2 1 195 0 6 1266 420 120 0 0 chr15 89264604 89264672 -14230302 + ORR1C2 LTR MaLR 13 80 -298 6 1266 218 202 0 45 chr15 89265185 89265273 -14229701 + (TAAA)n Simple_repeat Simple_repeat 1 84 0 6 1266 225 127 73 0 chr15 89265196 89265251 -14229723 + (TA)n Simple_repeat Simple_repeat 1 59 0 6 1266 27 73 0 0 chr15 89265407 89265462 -14229512 + AT_rich Low_complexity Low_complexity 1 55 0 6 1266 1247 128 28 0 chr15 89265488 89265668 -14229306 - B2_Mm2 SINE B2 -9 186 2 6 1266 271 289 0 0 chr15 89265961 89266044 -14228930 + MYSERV6-int LTR ERVK 819 901 -8058 6 1266 1295 286 69 100 chr15 89266055 89266201 -14228773 + MYSERV-int LTR ERVK 3775 3906 -2644 6 1266 2065 181 126 26 chr15 89266201 89266655 -14228319 - RLTR19 LTR ERVK 0 499 1 6 1266 1295 286 69 100 chr15 89266655 89266835 -14228139 + MYSERV-int LTR ERVK 3907 4080 -2470 6 1266 1151 69 0 20 chr15 89266835 89266982 -14227992 + B1_Mus1 SINE Alu 5 148 0 6 1266 1295 286 69 100 chr15 89266982 89267412 -14227562 + MYSERV-int LTR ERVK 4081 4508 -2042 6 1266 846 191 0 7 chr15 89267412 89267979 -14226995 + GA-rich Low_complexity Low_complexity 1 562 0 6 1266 444 241 25 0 chr15 89267980 89268219 -14226755 + (CAGG)n Simple_repeat Simple_repeat 1 245 0 6 1266 241 172 11 70 chr15 89268219 89268406 -14226568 + (CAGGG)n Simple_repeat Simple_repeat 3 178 0 6 1266 368 175 0 75 chr15 89268407 89268729 -14226245 + GA-rich Low_complexity Low_complexity 1 297 0 6 1266 393 130 52 64 chr15 89268729 89268818 -14226156 + B1_Mus2 SINE Alu 41 123 -24 6 1266 562 300 57 57 chr15 89268819 89269187 -14225787 + MYSERV16_I-int LTR ERVK 248 615 -1711 6 1266 1194 186 123 0 chr15 89269197 89269433 -14225541 + ORR1B1 LTR MaLR 1 265 -129 6 1266 3902 134 11 101 chr15 89269430 89270210 -14224764 + RMER6A LTR ERVK 47 756 0 6 1266 912 157 7 0 chr15 89270210 89270350 -14224624 + ORR1A4 LTR MaLR 189 329 0 6 1266 353 239 11 11 chr15 89270394 89270483 -14224491 + MYSERV16_I-int LTR ERVK 678 766 -1560 6 1266 226 302 0 16 chr15 89270492 89270556 -14224418 + RMER4B LTR ERVK 373 435 -150 6 1266 2428 186 40 61 chr15 89270594 89271121 -14223853 - RMER20A LTR ERVK 0 516 1 6 1266 418 313 56 88 chr15 89271121 89271313 -14223661 + RMER4A LTR ERVK 271 454 -12 6 1266 2586 199 118 51 chr15 89271314 89272179 -14222795 + MYSERV6-int LTR ERVK 7787 8709 -250 6 1266 1076 152 45 79 chr15 89272396 89272661 -14222313 + MYSERV6-int LTR ERVK 8704 8959 0 6 1266 270 262 79 20 chr15 89272662 89272814 -14222160 + RLTR15 LTR ERVK 1 161 -198 6 1266 507 287 25 83 chr15 89272781 89273058 -14221916 + RLTR15 LTR ERVK 78 338 -21 6 1266 479 325 121 29 chr15 89273258 89273578 -14221396 - RMER20B LTR ERVK -142 485 106 6 1266 1109 81 111 50 chr15 89274143 89274324 -14220650 + B2_Mm1t SINE B2 1 192 -1 6 1266 878 0 0 10 chr15 89274359 89274462 -14220512 + (GAA)n Simple_repeat Simple_repeat 2 103 0 6 1266 225 0 0 0 chr15 89274462 89274487 -14220487 + (CAG)n Simple_repeat Simple_repeat 1 25 0 6 1266 1847 157 117 8 chr15 89274542 89274901 -14220073 + MTD LTR MaLR 14 411 -8 6 1266 914 152 40 80 chr15 89276038 89276238 -14218736 + B2_Mm2 SINE B2 1 192 -3 6 1266 558 343 72 34 chr15 89276588 89276881 -14218093 + ORR1E LTR MaLR 9 312 -47 6 1266 357 309 139 84 chr15 89276942 89277193 -14217781 - B4 SINE B4 -8 284 20 6 1266 1157 89 0 12 chr15 89277255 89277415 -14217559 + B2_Mm2 SINE B2 1 158 -37 6 1266 438 87 0 4 chr15 89277450 89277514 -14217460 + B2_Mm2 SINE B2 47 108 -108 6 1266 340 336 86 32 chr15 89277683 89277904 -14217070 - L1MEb LINE L1 -5182 888 656 6 1266 407 132 405 0 chr15 89277949 89278070 -14216904 - B3 SINE B2 0 216 47 6 1266 489 40 27 13 chr15 89278252 89278327 -14216647 - B1_Mur4 SINE Alu 0 150 75 6 1266 224 0 0 61 chr15 89278440 89278473 -14216501 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 1266 1038 53 0 0 chr15 89278479 89278611 -14216363 - B1_Mus1 SINE Alu -12 136 5 6 1266 569 213 82 0 chr15 89278626 89278748 -14216226 + B1_Mur2 SINE Alu 1 132 -17 6 1266 767 99 105 15 chr15 89278764 89278897 -14216077 - B1_Mus1 SINE Alu 0 148 4 6 1266 475 292 67 54 chr15 89278906 89279130 -14215844 - L1ME4a LINE L1 -160 5964 5738 6 1266 4051 165 88 10 chr15 89279154 89279221 -14215753 - Lx5 LINE L1 0 7050 6982 6 1266 2657 63 68 5 chr15 89279221 89279604 -14215370 + MTB_Mm LTR MaLR 1 407 0 6 1266 4051 165 88 10 chr15 89279604 89280339 -14214635 - Lx5 LINE L1 -69 6981 6185 6 1266 3487 130 32 34 chr15 89280362 89280981 -14213993 + Lx5 LINE L1 5587 6204 -846 6 1266 660 200 49 49 chr15 89281170 89281333 -14213641 + MTE2a LTR MaLR 197 359 -20 7 1266 451 259 25 41 chr15 89281759 89281880 -14213094 + B4 SINE B4 48 166 -126 7 1266 329 304 39 10 chr15 89281953 89282056 -14212918 + L1MEd LINE L1 1045 1150 -4969 7 1266 379 257 9 37 chr15 89282089 89282198 -14212776 - PB1D10 SINE Alu -1 116 11 7 1266 257 375 0 10 chr15 89282113 89282210 -14212764 - ID_B1 SINE B4 -49 175 80 7 1266 1145 56 0 0 chr15 89282261 89282404 -14212570 - B1_Mm SINE Alu -3 144 2 7 1266 189 0 0 0 chr15 89282787 89282808 -14212166 + (TC)n Simple_repeat Simple_repeat 2 22 0 7 1266 297 0 0 0 chr15 89282808 89282840 -14212134 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1266 534 226 96 0 chr15 89282840 89282955 -14212019 - B1_Mur1 SINE Alu -23 126 1 7 1266 183 80 0 0 chr15 89284364 89284389 -14210585 + (CCA)n Simple_repeat Simple_repeat 2 26 0 7 1266 204 40 0 0 chr15 89285300 89285325 -14209649 + (C)n Simple_repeat Simple_repeat 1 25 0 7 1266 183 26 49 49 chr15 89286780 89286821 -14208153 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 7 1266 321 100 0 0 chr15 89287045 89287095 -14207879 + (GGA)n Simple_repeat Simple_repeat 2 51 0 7 1266 327 105 0 0 chr15 89288430 89288487 -14206487 + (GGA)n Simple_repeat Simple_repeat 1 57 0 7 1266 1252 20 0 0 chr15 89289888 89290036 -14204938 + B1_Mus1 SINE Alu 1 148 0 7 1266 561 30 0 0 chr15 89290050 89290117 -14204857 + (GAAA)n Simple_repeat Simple_repeat 4 70 0 7 1266 840 92 0 0 chr15 89290628 89290747 -14204227 + (GA)n Simple_repeat Simple_repeat 2 120 0 7 1266 213 274 248 0 chr15 89291494 89291607 -14203367 + MIR SINE MIR 84 224 -38 7 1266 288 53 0 0 chr15 89293183 89293221 -14201753 + (TGG)n Simple_repeat Simple_repeat 1 38 0 7 1266 424 286 0 0 chr15 89293553 89293658 -14201316 + PB1D10 SINE Alu 1 105 -12 7 1266 374 93 0 39 chr15 89295380 89295458 -14199516 + (A)n Simple_repeat Simple_repeat 1 75 0 7 1266 195 69 0 0 chr15 89295460 89295489 -14199485 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 7 1266 2047 45 116 61 chr15 89295823 89296133 -14198841 - ORR1A2 LTR MaLR 0 327 1 7 1266 27 0 0 0 chr15 89296440 89296467 -14198507 + AT_rich Low_complexity Low_complexity 1 27 0 7 1266 1407 43 38 0 chr15 89296551 89296735 -14198239 + B2_Mm2 SINE B2 3 193 -2 7 1266 949 139 0 0 chr15 89296790 89296934 -14198040 + B1_Mus1 SINE Alu 5 148 0 7 1266 1232 177 134 11 chr15 89296978 89297246 -14197728 - MTD LTR MaLR -106 313 13 7 1266 198 0 0 0 chr15 89297246 89297268 -14197706 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1266 235 331 31 46 chr15 89297307 89297437 -14197537 - Lx8 LINE L1 -312 7161 7034 7 1266 22 35 0 0 chr15 89298432 89298461 -14196513 + AT_rich Low_complexity Low_complexity 1 29 0 7 1266 254 369 6 22 chr15 89299417 89299597 -14195377 + (TATG)n Simple_repeat Simple_repeat 3 179 0 7 1266 442 164 81 60 chr15 89299688 89299837 -14195137 - RMER17B LTR ERVK -495 463 312 7 1266 3043 213 49 70 chr15 89300562 89301010 -14193964 + RLTR13A LTR ERVK 1 452 -403 7 1266 3154 45 0 0 chr15 89301010 89301406 -14193568 + L1Md_T LINE L1 6187 6582 0 7 1266 3043 213 49 70 chr15 89301406 89301830 -14193144 + RLTR13A LTR ERVK 453 855 0 7 1266 404 346 80 53 chr15 89302582 89302884 -14192090 - B4 SINE B4 -13 279 1 7 1266 208 100 50 0 chr15 89302918 89302958 -14192016 + (TTTTA)n Simple_repeat Simple_repeat 5 46 0 7 1266 395 364 33 38 chr15 89303348 89303531 -14191443 + MIR SINE MIR 26 207 -55 7 1266 204 268 22 44 chr15 89306627 89306717 -14188257 + (CGGGG)n Simple_repeat Simple_repeat 2 89 0 7 1266 369 43 0 0 chr15 89307230 89307277 -14187697 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 1266 1126 114 97 0 chr15 89309332 89309488 -14185486 + B2_Mm2 SINE B2 2 174 -21 7 1266 294 29 0 0 chr15 89309488 89309523 -14185451 + (TAA)n Simple_repeat Simple_repeat 3 37 0 7 1266 1126 114 97 0 chr15 89309523 89309542 -14185432 + B2_Mm2 SINE B2 175 193 -2 7 1266 1218 72 49 16 chr15 89309623 89309808 -14185166 + B2_Mm1t SINE B2 2 192 -1 7 1266 383 317 96 21 chr15 89310424 89310611 -14184363 + B4A SINE B4 6 206 -86 7 1266 620 100 20 10 chr15 89310608 89310709 -14184265 + B1_Mur4 SINE Alu 48 149 -1 7 1266 282 298 45 142 chr15 89310609 89310785 -14184189 + B4A SINE B4 133 291 -1 7 1266 918 171 0 0 chr15 89310795 89310971 -14184003 + (CA)n Simple_repeat Simple_repeat 2 177 0 7 1266 330 26 0 0 chr15 89311613 89311652 -14183322 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 7 1266 29 0 0 0 chr15 89312106 89312135 -14182839 + AT_rich Low_complexity Low_complexity 1 29 0 7 1266 1159 92 87 0 chr15 89312136 89312309 -14182665 + B2_Mm2 SINE B2 1 188 -7 7 1266 788 226 33 19 chr15 89312309 89312521 -14182453 - B3 SINE B2 0 216 2 7 1266 2641 137 139 40 chr15 89312560 89313092 -14181882 - RMER4B LTR ERVK 0 585 1 7 1266 837 174 86 11 chr15 89313393 89313568 -14181406 - ORR1D1 LTR MaLR -3 371 183 7 1266 1308 198 195 120 chr15 89313568 89314044 -14180930 + RMER19B LTR ERVK 1 512 -390 7 1266 251 326 22 11 chr15 89314393 89314483 -14180491 + ID4_ SINE ID 2 92 -60 7 1266 894 85 46 0 chr15 89314483 89314497 -14180477 - B1_Mus1 SINE Alu -11 137 124 7 1266 330 87 0 0 chr15 89314497 89314543 -14180431 + (CTTA)n Simple_repeat Simple_repeat 1 46 0 7 1266 894 85 46 0 chr15 89314543 89314658 -14180316 - B1_Mus1 SINE Alu -25 123 3 7 1266 308 346 9 9 chr15 89314762 89314870 -14180104 + L1MEd LINE L1 46 153 -5983 7 1266 707 297 29 0 chr15 89315080 89315289 -14179685 + B3 SINE B2 1 215 -1 7 1266 259 278 0 135 chr15 89315509 89315613 -14179361 + PB1D7 SINE Alu 31 120 0 7 1266 378 129 0 0 chr15 89315618 89315680 -14179294 + (CA)n Simple_repeat Simple_repeat 2 63 0 7 1266 488 254 30 38 chr15 89315750 89315881 -14179093 + B1_Mur1 SINE Alu 3 132 -17 7 1266 583 252 13 26 chr15 89315920 89316071 -14178903 + B1F1 SINE Alu 1 149 0 7 1266 203 0 37 0 chr15 89316164 89316191 -14178783 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 7 1266 837 69 114 8 chr15 89316191 89316289 -14178685 - B1_Mus1 SINE Alu 0 148 51 7 1266 648 0 0 0 chr15 89316289 89316361 -14178613 + (TTTTC)n Simple_repeat Simple_repeat 1 72 0 7 1266 678 85 0 0 chr15 89316361 89316454 -14178520 + (TCC)n Simple_repeat Simple_repeat 1 94 0 7 1266 198 0 0 0 chr15 89316455 89316477 -14178497 + (CTG)n Simple_repeat Simple_repeat 1 22 0 7 1266 837 69 114 8 chr15 89316477 89316507 -14178467 - B1_Mus1 SINE Alu -98 50 10 7 1266 237 195 0 0 chr15 89316646 89316687 -14178287 - RSINE1 SINE B4 -104 61 21 7 1266 588 255 7 28 chr15 89316701 89316846 -14178128 - ID_B1 SINE B4 -1 223 82 7 1266 840 184 0 7 chr15 89317285 89317433 -14177541 + B1_Mur2 SINE Alu 2 148 -1 7 1266 1251 271 0 28 chr15 89317564 89317883 -14177091 - Lx6 LINE L1 -15 7445 7136 7 1266 617 275 30 0 chr15 89317912 89318145 -14176829 + L1MEd LINE L1 4683 4922 -1224 7 1266 479 211 24 0 chr15 89318220 89318343 -14176631 - L1MB4 LINE L1 -24 6156 6031 7 1266 1105 270 87 20 chr15 89318514 89318681 -14176293 + MTD LTR MaLR 1 168 -251 7 1266 3514 136 113 5 chr15 89318681 89319302 -14175672 - RLTR17 LTR ERVK 0 692 5 7 1266 1105 270 87 20 chr15 89319302 89319527 -14175447 + MTD LTR MaLR 169 418 -1 7 1266 469 250 0 61 chr15 89319527 89319622 -14175352 + RSINE1 SINE B4 22 112 -53 7 1266 180 0 0 0 chr15 89319622 89319642 -14175332 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 1266 469 250 0 61 chr15 89319642 89319659 -14175315 + RSINE1 SINE B4 113 127 -38 7 1266 298 250 0 0 chr15 89319730 89319798 -14175176 + ID4 SINE ID 2 69 -14 7 1266 459 0 0 0 chr15 89319798 89319849 -14175125 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1266 346 268 12 0 chr15 89319866 89319948 -14175026 - ID4_ SINE ID 0 83 1 7 1266 659 211 0 104 chr15 89320053 89320217 -14174757 + B1_Mur2 SINE Alu 1 147 -2 7 1266 745 197 0 0 chr15 89320403 89320535 -14174439 - B1_Mur1 SINE Alu -3 146 15 7 1266 1118 202 69 59 chr15 89320535 89320905 -14174069 + RLTR20C LTR ERVK 1 479 -99 7 1266 381 22 0 0 chr15 89320905 89320951 -14174023 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1266 616 199 109 7 chr15 89320951 89321034 -14173940 + RLTR20C LTR ERVK 480 576 -2 7 1266 188 111 28 0 chr15 89321257 89321293 -14173681 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1266 449 206 110 73 chr15 89321303 89321439 -14173535 + B1_Mur1 SINE Alu 5 145 -4 7 1266 729 234 0 0 chr15 89321512 89321653 -14173321 + B1_Mur2 SINE Alu 2 142 -7 7 1266 314 229 22 67 chr15 89321768 89321857 -14173117 - PB1D10 SINE Alu -25 92 8 7 1266 191 225 0 0 chr15 89321962 89322002 -14172972 + MIR SINE MIR 183 222 -40 7 1266 1185 48 0 0 chr15 89322007 89322153 -14172821 + B1_Mm SINE Alu 1 146 -1 7 1266 411 298 61 80 chr15 89322559 89322835 -14172139 + L1MEe LINE L1 988 1246 -5063 7 1266 514 183 0 0 chr15 89322835 89322917 -14172057 + ID4_ SINE ID 2 83 0 7 1266 378 344 80 0 chr15 89322917 89322952 -14172022 + L1MEe LINE L1 1196 1230 -5170 7 1266 378 286 33 0 chr15 89323041 89323132 -14171842 + PB1D10 SINE Alu 8 101 -16 7 1266 1938 150 41 6 chr15 89323132 89323494 -14171480 - ORR1C1 LTR MaLR 0 378 4 7 1266 324 280 151 8 chr15 89323494 89323521 -14171453 + B1F1 SINE Alu 105 143 -6 7 1266 244 301 146 32 chr15 89323523 89323681 -14171293 + B2_Mm2 SINE B2 9 184 -11 7 1266 466 334 143 49 chr15 89323700 89324191 -14170783 + L1MEe LINE L1 1756 2292 -4047 7 1266 1837 139 25 6 chr15 89324191 89324509 -14170465 + Lx4A LINE L1 5692 6015 -1043 7 1266 5407 122 8 1 chr15 89324508 89325331 -14169643 + Lx4A LINE L1 6140 7054 -4 7 1266 279 0 0 0 chr15 89325348 89325379 -14169595 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 1266 222 136 23 0 chr15 89325386 89325430 -14169544 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 7 1266 644 243 77 6 chr15 89325512 89325694 -14169280 - B3 SINE B2 -19 197 3 7 1266 586 136 13 8 chr15 89325712 89325825 -14169149 - B1_Mus2 SINE Alu 0 149 40 7 1266 231 303 0 38 chr15 89325835 89325914 -14169060 - PB1D10 SINE Alu 0 117 42 8 1266 362 345 120 72 chr15 89325919 89326278 -14168696 + L1MEe LINE L1 2911 3286 -3033 7 1266 227 241 48 12 chr15 89326284 89326368 -14168606 + PB1D7 SINE Alu 25 111 -9 8 1266 237 255 0 0 chr15 89326487 89326534 -14168440 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1266 362 234 16 64 chr15 89329843 89330030 -14164944 + C-rich Low_complexity Low_complexity 1 178 0 8 1266 32 26 0 0 chr15 89330126 89330165 -14164809 + GC_rich Low_complexity Low_complexity 1 39 0 8 1266 25 31 0 0 chr15 89330582 89330614 -14164360 + GC_rich Low_complexity Low_complexity 1 32 0 8 1266 261 0 0 0 chr15 89331397 89331426 -14163548 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 1266 459 128 0 0 chr15 89336419 89336505 -14158469 + (TG)n Simple_repeat Simple_repeat 1 86 0 8 1266 180 0 0 0 chr15 89336505 89336525 -14158449 + (GA)n Simple_repeat Simple_repeat 2 21 0 8 1266 1946 194 34 39 chr15 89337518 89337787 -14157187 - MTD LTR MaLR -7 412 136 8 1266 375 23 0 0 chr15 89337787 89337831 -14157143 + (CAAT)n Simple_repeat Simple_repeat 3 46 0 8 1266 1946 194 34 39 chr15 89337831 89337973 -14157001 - MTD LTR MaLR -284 135 3 8 1266 289 289 48 0 chr15 89338576 89338680 -14156294 - MER5A1 DNA MER1_type -32 134 26 8 1266 536 350 48 30 chr15 89338752 89338870 -14156104 - L1MB5 LINE L1 -1 6173 6062 8 1266 6362 58 1 0 chr15 89338870 89339641 -14155333 - L1_Mus1 LINE L1 0 6567 5796 8 1266 536 350 48 30 chr15 89339641 89339961 -14155013 - L1MB5 LINE L1 -113 6061 5727 8 1266 626 244 6 84 chr15 89339970 89340149 -14154825 - B3 SINE B2 -15 201 37 8 1266 1243 109 6 6 chr15 89340157 89340333 -14154641 - B2_Mm2 SINE B2 -19 176 1 8 1266 701 125 18 9 chr15 89340334 89340447 -14154527 - B1_Mur3 SINE Alu 0 149 36 8 1266 743 286 99 56 chr15 89340520 89340964 -14154010 - L1MB5 LINE L1 -456 5718 5256 8 1266 457 163 23 23 chr15 89340976 89341064 -14153910 + RSINE1 SINE B4 4 91 -74 8 1266 444 118 0 0 chr15 89341096 89341164 -14153810 + (CA)n Simple_repeat Simple_repeat 1 68 0 8 1266 541 244 24 0 chr15 89341205 89341328 -14153646 - B1F SINE Alu -1 148 23 8 1266 226 224 20 0 chr15 89341357 89341406 -14153568 - PB1 SINE Alu -30 97 48 8 1266 933 155 120 11 chr15 89341536 89341719 -14153255 - B3 SINE B2 0 216 14 8 1266 558 155 208 33 chr15 89341970 89342090 -14152884 - B1_Mur1 SINE Alu -7 142 2 8 1266 21 0 0 0 chr15 89342195 89342216 -14152758 + AT_rich Low_complexity Low_complexity 1 21 0 8 1266 714 81 0 0 chr15 89342372 89342483 -14152491 + (CA)n Simple_repeat Simple_repeat 2 112 0 8 1266 768 169 81 0 chr15 89342484 89342620 -14152354 - B1_Mur3 SINE Alu -2 147 1 8 1266 440 306 97 60 chr15 89342630 89343074 -14151900 - MER34B-int LTR ERV1 -944 3927 3686 8 1266 226 255 0 0 chr15 89343239 89343286 -14151688 + ID_B1 SINE B4 171 217 -7 8 1266 297 305 12 0 chr15 89343313 89343395 -14151579 - MER34B-int LTR ERV1 -785 4151 4069 8 1266 687 276 65 62 chr15 89343547 89343837 -14151137 - MER34B-int LTR ERV1 -1273 4083 3793 8 1266 1229 48 7 0 chr15 89343916 89344063 -14150911 + B1_Mus1 SINE Alu 1 148 0 8 1266 755 137 8 0 chr15 89344088 89344212 -14150762 + B1_Mur4 SINE Alu 1 125 -25 8 1266 202 111 43 22 chr15 89344215 89344261 -14150713 + (CAAAC)n Simple_repeat Simple_repeat 3 49 0 8 1266 386 319 43 0 chr15 89344365 89344506 -14150468 - B1F1 SINE Alu -1 148 2 8 1266 225 153 11 66 chr15 89344585 89344676 -14150298 + CT-rich Low_complexity Low_complexity 3 88 0 8 1266 350 274 59 0 chr15 89344695 89344797 -14150177 - PB1 SINE Alu -19 108 1 8 1266 422 336 65 44 chr15 89344802 89345141 -14149833 - MER34B-int LTR ERV1 -1686 3670 3325 8 1266 328 322 0 0 chr15 89345200 89345290 -14149684 + PB1D10 SINE Alu 14 103 -14 8 1266 569 204 0 36 chr15 89345457 89345569 -14149405 + PB1D9 SINE Alu 1 108 -12 8 1266 183 42 0 0 chr15 89345569 89345593 -14149381 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 8 1266 333 0 0 0 chr15 89346109 89346146 -14148828 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 1266 309 82 0 0 chr15 89346214 89346263 -14148711 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 8 1266 238 306 81 7 chr15 89346909 89347057 -14147917 - L1M4 LINE L1 -1097 5049 4891 8 1266 1048 289 224 32 chr15 89347049 89347225 -14147749 - L1M4 LINE L1 -1770 4376 4191 8 1266 369 0 0 0 chr15 89347225 89347266 -14147708 + (TC)n Simple_repeat Simple_repeat 2 42 0 8 1266 1048 289 224 32 chr15 89347266 89347301 -14147673 - L1M4 LINE L1 -1956 4190 4153 8 1266 506 16 16 0 chr15 89347301 89347364 -14147610 + (TTCCC)n Simple_repeat Simple_repeat 4 67 0 8 1266 329 194 277 11 chr15 89347364 89347458 -14147516 - PB1D9 SINE Alu 0 120 2 8 1266 1048 289 224 32 chr15 89347458 89348130 -14146844 - L1M4 LINE L1 -1994 4152 3306 8 1266 1191 179 56 14 chr15 89348130 89348345 -14146629 + URR1A DNA MER1_type 3 226 0 8 1266 1048 289 224 32 chr15 89348345 89348420 -14146554 - L1M4 LINE L1 -2841 3305 3234 8 1266 548 261 15 7 chr15 89348436 89348571 -14146403 - B3 SINE B2 0 216 81 8 1266 384 203 14 0 chr15 89348711 89348785 -14146189 - B3A SINE B2 -117 81 7 8 1266 815 168 27 20 chr15 89348794 89348940 -14146034 - B1_Mur2 SINE Alu 0 149 3 8 1266 362 297 17 8 chr15 89348951 89349070 -14145904 - PB1D9 SINE Alu 0 120 1 8 1266 286 327 86 31 chr15 89349166 89349325 -14145649 - L1M4 LINE L1 -3453 2687 2512 8 1266 1503 77 0 20 chr15 89349325 89349523 -14145451 - B2_Mm2 SINE B2 -1 194 1 8 1266 286 327 86 31 chr15 89349523 89349619 -14145355 - L1M4 LINE L1 -3629 2511 2418 8 1266 348 111 0 0 chr15 89349669 89349723 -14145251 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 1266 849 275 39 21 chr15 89349727 89350006 -14144968 - B4 SINE B4 -4 288 5 8 1266 216 97 0 0 chr15 89350074 89350105 -14144869 + (TTA)n Simple_repeat Simple_repeat 3 33 0 8 1266 856 200 7 0 chr15 89350129 89350269 -14144705 + B1_Mur2 SINE Alu 1 141 -8 8 1266 551 311 16 8 chr15 89350344 89350544 -14144430 + MER58A DNA MER1_type 48 339 -2 8 1266 1046 280 3 28 chr15 89350896 89351186 -14143788 - B4 SINE B4 -7 285 3 8 1266 1132 163 167 0 chr15 89351213 89351489 -14143485 + Lx9 LINE L1 7307 7628 -16 8 1266 230 29 0 56 chr15 89353410 89353446 -14141528 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 8 1266 319 277 173 14 chr15 89353478 89353617 -14141357 - LTR50 LTR ERVL -631 164 4 8 1266 25 0 0 0 chr15 89354092 89354117 -14140857 + GC_rich Low_complexity Low_complexity 1 25 0 8 1266 47 93 0 11 chr15 89354172 89354296 -14140678 + GC_rich Low_complexity Low_complexity 1 124 0 8 1266 212 0 36 0 chr15 89354296 89354324 -14140650 + (CGGG)n Simple_repeat Simple_repeat 3 31 0 8 1266 47 93 0 11 chr15 89354324 89354373 -14140601 + GC_rich Low_complexity Low_complexity 1 48 0 8 1266 51 31 0 0 chr15 89354476 89354541 -14140433 + GC_rich Low_complexity Low_complexity 1 65 0 8 1266 258 107 0 51 chr15 89356724 89356783 -14138191 + T-rich Low_complexity Low_complexity 4 59 0 8 1266 1486 73 21 0 chr15 89356818 89357009 -14137965 - B2_Mm2 SINE B2 0 195 1 8 1266 1389 87 60 0 chr15 89357010 89357193 -14137781 - B2_Mm2 SINE B2 0 195 2 8 1266 555 90 0 0 chr15 89359600 89359678 -14135296 + (TCCA)n Simple_repeat Simple_repeat 2 79 0 8 1266 246 305 64 37 chr15 89359839 89359948 -14135026 - L2b LINE L2 -25 3350 3239 8 1266 346 270 43 35 chr15 89359970 89360085 -14134889 + PB1D10 SINE Alu 2 117 0 8 1266 27 0 0 0 chr15 89360146 89360173 -14134801 + AT_rich Low_complexity Low_complexity 1 27 0 8 1266 233 57 0 28 chr15 89360175 89360211 -14134763 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 8 1266 430 259 168 0 chr15 89360270 89360413 -14134561 + B3 SINE B2 50 216 0 8 1266 336 24 0 0 chr15 89360479 89360520 -14134454 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 8 1266 703 205 166 11 chr15 89365522 89365709 -14129265 + B3 SINE B2 1 216 0 8 1266 270 0 0 0 chr15 89365862 89365892 -14129082 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 8 1266 308 342 100 7 chr15 89365975 89366125 -14128849 + L1MEd LINE L1 1001 1164 -4955 8 1266 257 280 139 10 chr15 89367037 89367138 -14127836 - PB1D10 SINE Alu -1 116 3 8 1266 449 223 76 19 chr15 89367482 89367587 -14127387 + B1F SINE Alu 12 122 -27 8 1266 261 175 0 66 chr15 89367944 89368005 -14126969 + ID4 SINE ID 25 81 -2 8 1266 245 259 0 0 chr15 89368159 89368213 -14126761 + (TG)n Simple_repeat Simple_repeat 2 55 0 8 1266 22 0 0 0 chr15 89369572 89369594 -14125380 + AT_rich Low_complexity Low_complexity 1 22 0 8 1266 282 250 100 0 chr15 89371054 89371134 -14123840 - PB1D7 SINE Alu -11 109 22 8 1266 556 288 48 76 chr15 89371136 89371472 -14123502 - MTE2a LTR MaLR -8 371 1 8 1266 917 245 99 53 chr15 89371601 89371770 -14123204 - B4A SINE B4 -17 275 92 8 1266 1452 66 5 16 chr15 89371770 89371956 -14123018 - B2_Mm1t SINE B2 -9 184 1 8 1266 917 245 99 53 chr15 89371956 89372049 -14122925 - B4A SINE B4 -201 91 1 8 1266 450 0 0 0 chr15 89372299 89372349 -14122625 + (GGAA)n Simple_repeat Simple_repeat 2 51 0 8 1266 26 0 0 0 chr15 89372719 89372745 -14122229 + AT_rich Low_complexity Low_complexity 1 26 0 8 1266 904 108 221 31 chr15 89372756 89372919 -14122055 - B2_Mm2 SINE B2 0 195 2 8 1266 198 0 0 0 chr15 89372995 89373017 -14121957 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1266 1002 86 42 28 chr15 89373052 89373196 -14121778 - B1_Mus1 SINE Alu 0 148 3 8 1266 654 13 0 0 chr15 89373196 89373271 -14121703 + (TC)n Simple_repeat Simple_repeat 1 75 0 8 1266 215 270 211 35 chr15 89375235 89375381 -14119593 - MIRb SINE MIR -10 252 79 8 1266 420 20 0 0 chr15 89382149 89382198 -14112776 + (TTTC)n Simple_repeat Simple_repeat 2 50 0 8 1266 250 206 133 27 chr15 89382198 89382273 -14112701 - PB1D10 SINE Alu 0 117 35 8 1266 239 313 0 15 chr15 89383248 89383316 -14111658 - tRNA-Ala-GCY_ tRNA tRNA -5 70 4 8 1266 276 100 0 0 chr15 89383362 89383402 -14111572 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 1266 732 228 35 0 chr15 89383405 89383550 -14111424 - RSINE1 SINE B4 -12 153 4 8 1266 423 331 0 8 chr15 89383552 89383680 -14111294 - B1F2 SINE Alu -17 132 6 8 1266 225 94 0 0 chr15 89383710 89383742 -14111232 + (T)n Simple_repeat Simple_repeat 1 32 0 8 1266 27 0 0 0 chr15 89383790 89383817 -14111157 + AT_rich Low_complexity Low_complexity 1 27 0 8 1266 291 208 26 13 chr15 89384490 89384568 -14110406 + ID4 SINE ID 2 80 -3 8 1266 196 235 29 0 chr15 89384569 89384637 -14110337 + GA-rich Low_complexity Low_complexity 1 70 0 9 1266 227 286 84 96 chr15 89386196 89386374 -14108600 - ORR1E LTR MaLR -40 319 144 9 1266 915 131 14 21 chr15 89386425 89386565 -14108409 - B1_Mur1 SINE Alu -9 140 2 9 1266 305 75 19 0 chr15 89390211 89390264 -14104710 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 9 1266 47 19 0 0 chr15 89390629 89390683 -14104291 + AT_rich Low_complexity Low_complexity 1 54 0 9 1266 28 0 0 0 chr15 89390893 89390921 -14104053 + AT_rich Low_complexity Low_complexity 1 28 0 9 1266 276 351 37 62 chr15 89390928 89390977 -14103997 - RSINE1 SINE B4 -6 159 3 9 1266 555 200 9 18 chr15 89390977 89391089 -14103885 - B3A SINE B2 -86 112 2 9 158 227 315 43 134 chr15 89391029 89391216 -14103758 - ZP3AR Satellite Satellite 0 212 43 9 1267 668 144 39 7 chr15 89392443 89392571 -14102403 + B2_Mm1t SINE B2 53 181 -14 9 1267 329 98 80 22 chr15 89392618 89392718 -14102256 + B2_Mm2 SINE B2 47 188 -7 9 1267 548 305 118 41 chr15 89393283 89393422 -14101552 + B4 SINE B4 1 135 -157 9 1267 186 43 0 0 chr15 89393422 89393445 -14101529 + (CAGGG)n Simple_repeat Simple_repeat 3 25 0 9 1267 548 305 118 41 chr15 89393445 89393551 -14101423 + B4 SINE B4 136 265 -27 9 1267 525 32 0 0 chr15 89393607 89393670 -14101304 + (CA)n Simple_repeat Simple_repeat 2 64 0 9 1267 396 0 0 0 chr15 89393670 89393713 -14101261 + (GA)n Simple_repeat Simple_repeat 2 45 0 9 1267 335 78 0 19 chr15 89393715 89393767 -14101207 + (CA)n Simple_repeat Simple_repeat 1 51 0 9 1267 874 173 7 1 chr15 89394159 89394305 -14100669 - B1_Mus2 SINE Alu -5 142 2 9 1267 266 293 0 0 chr15 89394333 89394408 -14100566 - ID4 SINE ID -5 78 4 9 1267 1412 80 0 5 chr15 89394461 89394649 -14100325 - B2_Mm2 SINE B2 -7 188 2 9 1267 470 221 9 37 chr15 89394685 89394793 -14100181 - PB1D9 SINE Alu -5 115 11 9 1267 426 268 68 61 chr15 89394853 89395016 -14099958 - RSINE1 SINE B4 0 165 2 9 1267 343 305 0 10 chr15 89395439 89395535 -14099439 - B1F1 SINE Alu -34 115 21 9 1267 1063 110 0 0 chr15 89395731 89395877 -14099097 + B2_Mm2 SINE B2 1 146 -49 9 1267 396 0 0 0 chr15 89395879 89395923 -14099051 + (CAAT)n Simple_repeat Simple_repeat 2 45 0 9 1267 335 149 158 66 chr15 89395954 89396068 -14098906 + B2_Mm2 SINE B2 47 192 -1 9 1267 203 0 37 0 chr15 89396117 89396144 -14098830 + (CTAAT)n Simple_repeat Simple_repeat 3 30 0 9 1267 681 243 87 38 chr15 89396668 89396852 -14098122 + B3A SINE B2 6 198 0 9 1267 21 57 0 0 chr15 89396852 89396887 -14098087 + AT_rich Low_complexity Low_complexity 1 35 0 9 1267 1171 161 92 5 chr15 89397098 89397304 -14097670 - URR1A DNA MER1_type 0 226 3 9 1267 645 14 0 0 chr15 89401585 89401659 -14093315 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 9 1267 931 67 0 36 chr15 89401755 89401895 -14093079 + URR1B DNA MER1_type 90 224 -1 9 1267 287 0 53 0 chr15 89403032 89403070 -14091904 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 9 1267 1298 97 5 5 chr15 89405549 89405735 -14089239 + B2_Mm2 SINE B2 10 195 0 9 1267 210 71 0 0 chr15 89406867 89406895 -14088079 + (GAA)n Simple_repeat Simple_repeat 3 30 0 9 1267 1927 182 55 26 chr15 89407292 89407675 -14087299 - MTD LTR MaLR -8 411 18 9 1267 804 261 58 0 chr15 89408300 89408488 -14086486 + B3 SINE B2 1 199 -17 9 1267 387 0 0 0 chr15 89408499 89408542 -14086432 + (CAA)n Simple_repeat Simple_repeat 2 44 0 9 1267 255 226 58 23 chr15 89409293 89409379 -14085595 + RLTR42-int LTR ERVK 1520 1608 -3914 9 1267 425 220 11 11 chr15 89409896 89409988 -14084986 - ORR1D1 LTR MaLR -4 370 279 9 1267 2505 126 49 3 chr15 89409991 89410382 -14084592 + MTC LTR MaLR 1 409 -12 9 1267 1504 207 23 0 chr15 89410390 89410656 -14084318 - ORR1D1 LTR MaLR -98 276 5 9 1267 396 271 9 36 chr15 89410832 89410943 -14084031 - B1_Mur4 SINE Alu -8 142 35 9 1267 295 256 84 149 chr15 89410963 89411130 -14083844 + L1MB5 LINE L1 5711 5845 -335 9 1267 484 191 235 0 chr15 89411130 89411245 -14083729 - B1_Mm SINE Alu -5 142 1 9 1267 473 153 150 11 chr15 89411245 89411352 -14083622 + L1MB5 LINE L1 5846 5968 -206 9 1267 257 345 135 59 chr15 89411630 89411867 -14083107 + LTR16A1 LTR ERVL 107 361 -95 9 1267 236 320 13 26 chr15 89412027 89412104 -14082870 + ID2 SINE ID 3 78 -5 9 1267 228 143 0 0 chr15 89412110 89412152 -14082822 + (CATG)n Simple_repeat Simple_repeat 3 44 0 9 1267 708 218 21 7 chr15 89412193 89412336 -14082638 - B1_Mur1 SINE Alu -2 147 3 9 1267 352 299 46 115 chr15 89412336 89412366 -14082608 - B4 SINE B4 -68 223 63 9 1267 1312 183 216 13 chr15 89412645 89412955 -14082019 + ORR1D1 LTR MaLR 1 373 -1 9 1267 183 42 0 0 chr15 89413544 89413568 -14081406 + (TGGGGG)n Simple_repeat Simple_repeat 3 26 0 9 1267 408 67 0 0 chr15 89415066 89415126 -14079848 + (GA)n Simple_repeat Simple_repeat 1 60 0 9 1267 190 306 56 0 chr15 89415393 89415465 -14079509 - L2c LINE L2 -228 3159 3084 9 1267 236 315 101 1 chr15 89415758 89415857 -14079117 + MLT1G3 LTR MaLR 183 290 -289 9 1267 208 77 51 0 chr15 89417466 89417505 -14077469 + (TGGGGG)n Simple_repeat Simple_repeat 3 43 0 9 1267 688 118 176 0 chr15 89417542 89417661 -14077313 - B1_Mur1 SINE Alu -7 142 3 9 1267 387 0 0 0 chr15 89418007 89418050 -14076924 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 1267 282 274 95 0 chr15 89418315 89418410 -14076564 - MIR SINE MIR -139 123 20 9 1267 301 294 0 0 chr15 89419464 89419532 -14075442 + MTE2a LTR MaLR 1 68 -311 9 1267 23 0 0 0 chr15 89421312 89421335 -14073639 + AT_rich Low_complexity Low_complexity 1 23 0 9 1267 824 185 179 31 chr15 89421358 89421553 -14073421 - URR1B DNA MER1_type -1 224 1 9 1267 2021 133 77 88 chr15 89422568 89422873 -14072101 - Lx4B LINE L1 -4 7054 6768 9 1267 284 0 28 0 chr15 89422873 89422909 -14072065 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 1267 2021 133 77 88 chr15 89422909 89423071 -14071903 - Lx4B LINE L1 -291 6767 6594 9 1267 814 191 63 32 chr15 89423091 89423280 -14071694 - RMER10A LTR ERVL -247 195 1 9 1267 369 0 0 0 chr15 89423480 89423521 -14071453 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1267 200 167 0 0 chr15 89423556 89423586 -14071388 + (TTG)n Simple_repeat Simple_repeat 3 32 0 9 1267 1903 192 100 33 chr15 89423586 89423859 -14071115 + RCHARR1 DNA MER1_type 399 682 -292 9 1267 1447 65 32 5 chr15 89423859 89424046 -14070928 + B2_Mm2 SINE B2 1 192 -3 9 1267 1903 192 100 33 chr15 89424046 89424312 -14070662 + RCHARR1 DNA MER1_type 683 974 0 9 1267 465 66 0 0 chr15 89424646 89424707 -14070267 + (CA)n Simple_repeat Simple_repeat 2 62 0 9 1267 1738 159 53 16 chr15 89424707 89425119 -14069855 - RLTR20B3 LTR ERVK -106 471 1 9 1267 494 215 112 0 chr15 89425290 89425397 -14069577 - PB1D7 SINE Alu 0 120 2 9 1267 1011 213 35 5 chr15 89425442 89425645 -14069329 + B3 SINE B2 2 210 -6 9 1267 211 194 0 0 chr15 89425645 89425681 -14069293 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 9 1267 288 102 0 0 chr15 89426317 89426366 -14068608 + (TG)n Simple_repeat Simple_repeat 2 50 0 9 1267 492 290 123 12 chr15 89426478 89426649 -14068325 - B4 SINE B4 -100 192 3 9 1267 714 192 41 17 chr15 89427054 89427224 -14067750 + RMER19B LTR ERVK 1 149 -753 9 1267 1178 112 0 0 chr15 89427211 89427371 -14067603 - RMER19B LTR ERVK -648 254 95 9 1267 4436 106 149 4 chr15 89427387 89428118 -14066856 + L1VL2 LINE L1 101 937 -5398 9 1267 430 108 0 70 chr15 89428114 89428214 -14066760 + MusHAL1 LINE L1 822 914 -1798 9 1267 9843 47 7 3 chr15 89428215 89430153 -14064821 - L1Md_F2 LINE L1 -13 6569 4625 9 1267 18531 137 81 5 chr15 89430154 89434348 -14060626 + Lx LINE L1 2111 6646 -8 9 1267 246 293 53 0 chr15 89434738 89434813 -14060161 + ID4_ SINE ID 3 81 -2 9 1267 348 151 0 0 chr15 89434832 89434885 -14060089 + ID_B1 SINE B4 126 178 -46 9 1267 248 270 30 60 chr15 89435100 89435234 -14059740 + RMER17C LTR ERVK 180 309 -101 9 1267 306 0 0 0 chr15 89435275 89435309 -14059665 + (TG)n Simple_repeat Simple_repeat 1 34 0 9 1267 378 0 0 0 chr15 89435309 89435350 -14059624 + (GA)n Simple_repeat Simple_repeat 1 42 0 9 1267 750 218 143 30 chr15 89435403 89435503 -14059471 - B4A SINE B4 -62 230 129 9 1267 2409 71 51 16 chr15 89435503 89435819 -14059155 - ORR1A2 LTR MaLR 0 327 1 9 1267 750 218 143 30 chr15 89435819 89435921 -14059053 - B4A SINE B4 -164 128 5 9 1267 254 323 71 0 chr15 89435926 89436025 -14058949 - MIR SINE MIR -65 197 92 9 1267 601 171 97 8 chr15 89436234 89436358 -14058616 + MTC LTR MaLR 1 135 -286 9 1267 225 200 123 0 chr15 89436345 89436410 -14058564 + MTC LTR MaLR 311 383 -36 9 1267 222 274 0 46 chr15 89436571 89436636 -14058338 - ID_B1 SINE B4 -71 153 92 9 1267 490 289 23 23 chr15 89437071 89437202 -14057772 - ID_B1 SINE B4 -8 216 86 9 1267 323 151 0 36 chr15 89437215 89437270 -14057704 - B1F1 SINE Alu -5 144 92 9 1267 343 285 65 112 chr15 89437288 89437458 -14057516 + RSINE1 SINE B4 4 165 0 9 1267 721 260 24 42 chr15 89437602 89437815 -14057159 - B3 SINE B2 -7 209 1 9 1267 386 273 28 19 chr15 89438104 89438227 -14056747 - B1_Mur1 SINE Alu -21 129 7 9 1267 250 200 36 0 chr15 89438303 89438358 -14056616 - B4A SINE B4 -235 57 1 9 1267 472 155 17 17 chr15 89438791 89438909 -14056065 + (TCTG)n Simple_repeat Simple_repeat 2 119 0 9 1267 233 259 75 134 chr15 89439663 89439697 -14055277 + MT2B2 LTR ERVL 126 151 -433 9 1267 496 208 1 36 chr15 89439697 89439818 -14055156 + PB1D7 SINE Alu 1 117 -3 9 1267 200 35 35 0 chr15 89439818 89439847 -14055127 + (TC)n Simple_repeat Simple_repeat 1 30 0 9 1267 249 33 0 0 chr15 89439897 89439927 -14055047 + (CCA)n Simple_repeat Simple_repeat 1 30 0 1 1267 869 207 28 142 chr15 89439961 89440214 -14054760 + MT2A LTR ERVL 1 224 -309 1 1267 405 70 0 0 chr15 89440368 89440425 -14054549 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 1267 189 94 0 0 chr15 89440428 89440460 -14054514 + (TCTG)n Simple_repeat Simple_repeat 2 33 0 1 1267 799 205 37 37 chr15 89440611 89440829 -14054145 + MT2A LTR ERVL 316 533 0 1 1267 830 274 21 29 chr15 89440829 89441059 -14053915 + B4A SINE B4 25 252 -40 1 1267 522 307 5 63 chr15 89441387 89441592 -14053382 - RLTR14-int LTR ERV1 -25 5292 5100 1 1267 622 255 127 15 chr15 89441824 89442087 -14052887 + RLTR10A LTR ERVK 104 411 0 1 1267 370 174 60 60 chr15 89442106 89442222 -14052752 + IAP-d-int LTR ERVK 318 433 -1554 1 1267 3162 290 55 48 chr15 89442461 89445516 -14049458 + IAP-d-int LTR ERVK 992 7042 -202 1 1267 1448 24 0 6 chr15 89445539 89445738 -14049236 + L1Md_A LINE L1 6416 6582 0 1 1267 526 253 146 14 chr15 89445798 89446018 -14048956 + RLTR10A LTR ERVK 140 388 -23 1 1267 40020 43 7 1 chr15 89446029 89452532 -14042442 - L1Md_T LINE L1 0 6582 98 1 1267 22 35 0 0 chr15 89453484 89453513 -14041461 + AT_rich Low_complexity Low_complexity 1 29 0 1 1267 549 222 0 9 chr15 89453813 89453922 -14041052 - B3 SINE B2 -108 108 1 1 1267 570 222 49 0 chr15 89454397 89454559 -14040415 - Lx7 LINE L1 -16 7680 7511 1 1267 282 95 0 0 chr15 89454595 89454637 -14040337 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1267 671 237 68 25 chr15 89455043 89455332 -14039642 - L1_Rod LINE L1 -4128 1758 1460 1 1267 785 166 80 5 chr15 89455332 89455544 -14039430 - Lx9 LINE L1 0 7644 7417 1 1267 2228 242 57 6 chr15 89455537 89456105 -14038869 - Lx6 LINE L1 -8 7452 6478 1 1267 626 216 82 26 chr15 89456142 89456337 -14038637 - Lx9 LINE L1 -256 7388 7183 1 1267 914 50 8 0 chr15 89456405 89456525 -14038449 + (TC)n Simple_repeat Simple_repeat 2 122 0 1 1267 1052 81 171 24 chr15 89456525 89456689 -14038285 - B2_Mm2 SINE B2 -6 189 2 1 1267 451 236 110 88 chr15 89456747 89456975 -14037999 - L1_Rod LINE L1 -6476 1132 900 1 1267 3219 108 0 11 chr15 89457182 89457621 -14037353 - RLTR10C LTR ERVK -2 434 1 1 1267 875 284 89 28 chr15 89457649 89457975 -14036999 - L1M2 LINE L1 -1110 5033 4688 1 1267 554 293 57 82 chr15 89457974 89458204 -14036770 + L1M2 LINE L1 4252 4485 -1658 1 1267 1194 76 7 0 chr15 89458204 89458349 -14036625 + B1_Mus2 SINE Alu 2 147 0 1 1267 554 293 57 82 chr15 89458349 89458557 -14036417 + L1M2 LINE L1 4486 4679 -1464 1 1267 235 367 88 7 chr15 89458696 89458844 -14036130 + MIRc SINE MIR 3 162 -106 1 1267 417 365 58 11 chr15 89459079 89459270 -14035704 - MLT1I LTR MaLR -188 223 24 1 1267 568 262 26 90 chr15 89460706 89460767 -14034207 - RSINE1 SINE B4 -7 158 100 1 1267 2004 201 142 111 chr15 89460767 89461360 -14033614 - RMER19C LTR ERVK 0 611 1 1 1267 568 262 26 90 chr15 89461360 89461453 -14033521 - RSINE1 SINE B4 -66 99 14 1 1267 461 32 0 16 chr15 89462420 89462484 -14032490 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 1 1267 617 241 20 20 chr15 89463818 89463966 -14031008 - ORR1D1 LTR MaLR -224 150 3 1 1267 3558 247 135 35 chr15 89463966 89465637 -14029337 - Lx9 LINE L1 -370 7274 5421 1 1267 510 238 218 30 chr15 89466482 89466647 -14028327 - ID_B1 SINE B4 -2 222 27 1 1267 1358 14 0 0 chr15 89466846 89466992 -14027982 + B1_Mus2 SINE Alu 2 147 0 1 1267 206 32 0 31 chr15 89467000 89467032 -14027942 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1267 525 274 49 31 chr15 89467032 89467194 -14027780 - MER21B LTR ERV1 -50 813 649 1 1267 280 227 85 64 chr15 89467717 89467811 -14027163 - PB1D10 SINE Alu -1 116 21 1 1267 3032 48 37 3 chr15 89467903 89468277 -14026697 - L1Md_F3 LINE L1 0 6584 6198 1 1267 3211 128 192 24 chr15 89468295 89468957 -14026017 + MTB-int LTR MaLR 486 1258 0 1 1267 2797 90 5 15 chr15 89468957 89469351 -14025623 + MTB LTR MaLR 1 390 -10 1 1267 987 268 56 24 chr15 89469379 89469631 -14025343 - Lx8 LINE L1 -185 7288 7029 1 1267 229 170 21 0 chr15 89469663 89469710 -14025264 - Lx8 LINE L1 -530 6943 6896 1 1267 595 251 17 117 chr15 89469713 89469964 -14025010 - ORR1C1 LTR MaLR 0 384 160 1 1267 2416 205 16 155 chr15 89470178 89470767 -14024207 + RMER19C LTR ERVK 1 492 -119 1 1267 2568 121 0 3 chr15 89470767 89471114 -14023860 + ORR1A1 LTR MaLR 1 346 0 1 1267 2416 205 16 155 chr15 89471114 89471234 -14023740 + RMER19C LTR ERVK 493 611 0 1 1267 249 33 0 0 chr15 89471587 89471617 -14023357 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1267 553 265 22 0 chr15 89471624 89471760 -14023214 + LTR40a LTR ERVL 9 147 -372 1 1267 270 322 78 0 chr15 89471794 89471909 -14023065 + LTR40a LTR ERVL 217 340 -122 1 1267 5033 55 2 2 chr15 89472100 89472687 -14022287 + L1_Mus1 LINE L1 5981 6567 0 1 1267 26 0 0 0 chr15 89472721 89472747 -14022227 + AT_rich Low_complexity Low_complexity 1 26 0 1 1267 2508 148 63 5 chr15 89472757 89473172 -14021802 - RMER1B Other Other -11 1055 617 1 1267 250 384 56 6 chr15 89473303 89473481 -14021493 + HERVL40-int LTR ERVL 50 236 -5294 1 1267 2222 161 50 11 chr15 89473631 89474008 -14020966 - ORR1B1 LTR MaLR 0 394 3 1 1267 1457 57 51 0 chr15 89474218 89474395 -14020579 + B2_Mm2 SINE B2 1 186 -9 1 1267 324 0 0 0 chr15 89474557 89474593 -14020381 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1267 459 82 0 0 chr15 89474593 89474666 -14020308 + (GA)n Simple_repeat Simple_repeat 2 74 0 1 1267 242 213 64 0 chr15 89474845 89474892 -14020082 - Lx8 LINE L1 -370 7103 7054 1 1267 2464 262 70 28 chr15 89474883 89475356 -14019618 + RMER1C Other Other 522 1025 -317 1 1267 5903 120 10 5 chr15 89475356 89476177 -14018797 - Lx2 LINE L1 0 6997 6173 1 1267 2464 262 70 28 chr15 89476177 89476375 -14018599 + RMER1C Other Other 1026 1220 -122 1 1267 209 211 18 0 chr15 89476380 89476437 -14018537 + CT-rich Low_complexity Low_complexity 3 60 0 1 1267 288 77 0 0 chr15 89476438 89476477 -14018497 + (CCA)n Simple_repeat Simple_repeat 3 41 0 1 1267 666 210 0 53 chr15 89476477 89476628 -14018346 + RMER1C Other Other 1200 1342 0 1 1267 1794 271 14 43 chr15 89476638 89477144 -14017830 - Lx8 LINE L1 -395 7078 6588 1 1267 1108 174 50 193 chr15 89477145 89477352 -14017622 - ORR1C2 LTR MaLR 0 384 183 1 1267 542 15 15 0 chr15 89477352 89477419 -14017555 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 1 1267 1108 174 50 193 chr15 89477419 89477458 -14017516 - ORR1C2 LTR MaLR -202 182 182 1 1267 354 98 0 0 chr15 89477458 89477509 -14017465 + (TATG)n Simple_repeat Simple_repeat 2 52 0 1 1267 1108 174 50 193 chr15 89477509 89477603 -14017371 - ORR1C2 LTR MaLR -202 182 92 1 1267 382 194 30 61 chr15 89477625 89477724 -14017250 + RLTR19C LTR ERVK 19 114 -392 1 1267 231 253 85 75 chr15 89477813 89477907 -14017067 + RLTR33 LTR ERVK 467 561 -117 1 1267 624 167 0 0 chr15 89478097 89478205 -14016769 - ORR1C2 LTR MaLR -270 108 1 1 1267 5812 204 67 32 chr15 89478206 89479529 -14015445 - ORR1C2-int LTR MaLR -1 1369 1 1 1267 2168 146 55 45 chr15 89479529 89479909 -14015065 - ORR1C2 LTR MaLR 0 384 1 1 1267 279 79 0 0 chr15 89479959 89479997 -14014977 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1267 285 346 0 9 chr15 89480012 89480117 -14014857 - B3A SINE B2 -87 111 8 1 1267 496 146 10 10 chr15 89480134 89480238 -14014736 + CT-rich Low_complexity Low_complexity 1 104 0 1 1267 511 263 17 17 chr15 89480238 89480358 -14014616 - B1_Mur1 SINE Alu -6 143 24 1 1267 193 29 59 0 chr15 89480362 89480396 -14014578 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 1267 354 263 13 13 chr15 89480401 89480478 -14014496 - RSINE1 SINE B4 -86 79 3 1 1267 876 280 32 14 chr15 89480957 89481236 -14013738 + B4A SINE B4 5 288 -4 1 1267 276 111 0 0 chr15 89481250 89481295 -14013679 + (C)n Simple_repeat Simple_repeat 1 45 0 1 1267 358 272 17 26 chr15 89482547 89482664 -14012310 - PB1D10 SINE Alu 0 117 2 1 1267 552 218 27 18 chr15 89482770 89482882 -14012092 + PB1D10 SINE Alu 5 117 0 1 1267 207 157 0 73 chr15 89482925 89482980 -14011994 + A-rich Low_complexity Low_complexity 5 55 0 1 1267 3224 296 104 42 chr15 89483092 89484543 -14010431 - L1M2 LINE L1 -605 5695 4204 1 1267 1301 136 92 5 chr15 89484543 89484750 -14010224 + URR1B DNA MER1_type 1 225 0 1 1267 3224 294 107 41 chr15 89484750 89485967 -14009007 - L1M2 LINE L1 -1908 4235 2856 1 1267 424 252 44 26 chr15 89485982 89486096 -14008878 - PB1D9 SINE Alu 0 120 5 1 1267 293 255 9 105 chr15 89486019 89486124 -14008850 - B4A SINE B4 -127 165 71 1 1267 264 300 42 0 chr15 89486130 89486250 -14008724 - L1M2 LINE L1 -3281 2862 2738 1 1267 4233 82 16 27 chr15 89486250 89486685 -14008289 + MusHAL1 LINE L1 507 942 -1770 1 1267 2528 211 134 75 chr15 89486685 89487537 -14007437 + RLTR13D6 LTR ERVK 1 902 0 1 1267 4233 82 16 27 chr15 89487537 89487728 -14007246 + MusHAL1 LINE L1 943 1126 -1586 1 1267 2077 273 29 56 chr15 89487826 89488677 -14006297 - L1_Rod LINE L1 -1222 4625 3798 1 1267 335 297 0 35 chr15 89488720 89488835 -14006139 - L1M2 LINE L1 -3392 2751 2641 1 1267 293 284 0 9 chr15 89489049 89489159 -14005815 - MusHAL1 LINE L1 -2142 570 462 1 1267 1674 197 80 40 chr15 89489527 89489950 -14005024 - Lx7 LINE L1 0 7696 7257 1 1267 180 0 0 0 chr15 89489993 89490013 -14004961 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1267 39525 4 0 0 chr15 89490074 89495652 -13999322 + L1Md_A LINE L1 9 5586 -297 1 1267 9600 2 1 0 chr15 89495652 89496647 -13998327 + L1Md_A LINE L1 5587 6582 0 1 1267 1644 183 146 102 chr15 89497061 89497561 -13997413 + MT2A LTR ERVL 3 524 -9 1 1267 1211 82 0 13 chr15 89499310 89499453 -13995521 + B1_Mus1 SINE Alu 1 142 -6 1 1267 297 89 0 0 chr15 89499453 89499498 -13995476 + (CAA)n Simple_repeat Simple_repeat 1 45 0 1 1267 1483 227 111 11 chr15 89500000 89500370 -13994604 - MTD LTR MaLR 0 419 13 1 1267 318 134 0 0 chr15 89500370 89500437 -13994537 + (A)n Simple_repeat Simple_repeat 1 67 0 2 1267 1018 155 248 10 chr15 89500964 89501086 -13993888 - RMER17C LTR ERVK -46 364 218 3 1267 495 0 0 0 chr15 89501086 89501141 -13993833 + (GA)n Simple_repeat Simple_repeat 1 55 0 4 1267 1018 155 248 10 chr15 89501141 89501312 -13993662 - RMER17C LTR ERVK -193 217 1 3 1267 234 195 24 35 chr15 89502804 89502889 -13992085 + (CATAT)n Simple_repeat Simple_repeat 2 85 0 5 1267 477 211 7 40 chr15 89503390 89503538 -13991436 - Lx7 LINE L1 0 7696 7554 6 1267 681 47 0 0 chr15 89503538 89503623 -13991351 + (CAAAC)n Simple_repeat Simple_repeat 2 86 0 7 1267 276 103 0 17 chr15 89503866 89503925 -13991049 + L1Md_F2 LINE L1 6523 6580 -2 8 1267 240 35 0 0 chr15 89503940 89503969 -13991005 + (CAA)n Simple_repeat Simple_repeat 2 30 0 9 1267 4390 188 33 26 chr15 89504040 89505436 -13989538 - Lx7 LINE L1 -1164 6532 5125 6 1267 1181 176 35 94 chr15 89505430 89505769 -13989205 + L1_Mur3 LINE L1 4611 4929 -951 1 1267 216 0 0 0 chr15 89505769 89505793 -13989181 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1267 1222 48 0 0 chr15 89505793 89505940 -13989034 - B1_Mus2 SINE Alu 0 147 1 1 1267 384 145 29 0 chr15 89505970 89506039 -13988935 + MTD LTR MaLR 349 419 0 1 1267 1797 176 140 6 chr15 89506457 89506822 -13988152 + MTD LTR MaLR 1 414 -5 1 1267 27 0 0 0 chr15 89506864 89506891 -13988083 + AT_rich Low_complexity Low_complexity 1 27 0 1 1267 1849 175 55 28 chr15 89507309 89507673 -13987301 - ORR1D1 LTR MaLR 0 374 1 1 1267 297 361 40 7 chr15 89507679 89507827 -13987147 - MIR SINE MIR -107 155 3 1 1267 228 67 0 0 chr15 89508404 89508434 -13986540 + (CAAA)n Simple_repeat Simple_repeat 4 33 0 1 1267 490 216 10 0 chr15 89508476 89508573 -13986401 + B3 SINE B2 1 98 -118 1 1267 2468 81 22 0 chr15 89508689 89509009 -13985965 + ORR1A2 LTR MaLR 1 327 0 2 1267 332 246 0 0 chr15 89509010 89509071 -13985903 - ORR1D1 LTR MaLR -313 61 1 2 1267 860 241 14 14 chr15 89509071 89509294 -13985680 - Lx8 LINE L1 -846 6627 6405 2 1267 590 78 0 13 chr15 89509298 89509404 -13985570 - ORR1A2 LTR MaLR -246 100 1 2 1267 1884 162 3 34 chr15 89509406 89509731 -13985243 + ORR1C1 LTR MaLR 64 378 0 2 1267 310 338 13 58 chr15 89509735 89509889 -13985085 + Lx8 LINE L1 6627 6773 -700 2 1267 330 87 0 0 chr15 89509999 89510045 -13984929 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1267 563 263 0 50 chr15 89510077 89510217 -13984757 - ID_B1 SINE B4 -8 216 84 2 1267 1038 270 12 27 chr15 89510871 89511130 -13983844 - ORR1D2 LTR MaLR -115 255 1 2 1267 307 277 91 58 chr15 89511306 89511426 -13983548 - L1MEc LINE L1 -5505 895 782 2 1267 2460 98 16 22 chr15 89511426 89511792 -13983182 - Lx2A LINE L1 0 7008 6645 3 1267 307 277 91 58 chr15 89511792 89511947 -13983027 - L1MEc LINE L1 -5619 781 611 2 1267 891 175 13 58 chr15 89513028 89513252 -13981722 - L1_Mur3 LINE L1 -2831 3049 2836 3 1267 385 280 57 73 chr15 89513255 89513550 -13981424 + RLTR15 LTR ERVK 57 275 -84 3 1267 5371 205 86 15 chr15 89513599 89515477 -13979497 - L1_Mur3 LINE L1 -3041 2839 828 3 1267 1767 181 113 8 chr15 89515851 89516213 -13978761 - MTC LTR MaLR -7 414 15 3 1267 235 282 0 0 chr15 89516405 89516483 -13978491 - L1_Mur3 LINE L1 -6897 831 754 3 1267 2015 193 56 6 chr15 89516486 89516971 -13978003 - L1_Rod LINE L1 -2823 3024 2516 3 1267 230 409 94 8 chr15 89517725 89517979 -13976995 + MLT1A0 LTR MaLR 17 292 -73 3 1267 41 0 0 0 chr15 89517997 89518038 -13976936 + AT_rich Low_complexity Low_complexity 1 41 0 3 158 31645 81 2 1 chr15 89518998 89524153 -13970821 + L1Md_F2 LINE L1 481 5586 -297 3 1268 7352 63 25 17 chr15 89524153 89525140 -13969834 + L1Md_F2 LINE L1 5587 6581 -1 3 1268 519 91 0 0 chr15 89525140 89525217 -13969757 + L1_Mm LINE L1 4605 4681 -1202 3 1268 411 258 31 0 chr15 89525375 89525472 -13969502 + ORR1E LTR MaLR 1 100 -259 3 1268 2480 80 6 0 chr15 89525728 89526053 -13968921 - ORR1A2 LTR MaLR 0 327 1 4 1268 1267 149 24 30 chr15 89526402 89526638 -13968336 - ORR1B1 LTR MaLR -2 419 183 4 1268 272 258 93 41 chr15 89527096 89527193 -13967781 - PB1D10 SINE Alu -9 108 7 4 1268 185 0 40 0 chr15 89527221 89527246 -13967728 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 1268 1217 55 0 0 chr15 89527246 89527391 -13967583 - B1_Mus1 SINE Alu -2 146 2 4 1268 717 45 0 0 chr15 89529224 89529313 -13965661 + (TTTCC)n Simple_repeat Simple_repeat 5 93 0 4 1268 234 0 0 0 chr15 89529313 89529338 -13965636 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 4 1268 343 263 42 10 chr15 89529342 89529437 -13965537 - RLTR40 LTR ERVK -37 780 683 4 1268 1049 141 6 6 chr15 89529437 89529601 -13965373 + RMER6D LTR ERVK 1 164 -556 4 1268 1319 142 5 5 chr15 89529909 89530128 -13964846 - Lx5 LINE L1 -3 7047 6829 4 1268 2186 133 82 0 chr15 89530128 89530480 -13964494 - ORR1B1-int LTR MaLR -332 1631 1251 4 1268 6904 97 3 6 chr15 89530480 89531185 -13963789 - L1Md_F LINE L1 -3587 2296 1597 5 1268 3090 70 2 5 chr15 89531185 89531585 -13963389 - MTB LTR MaLR 0 400 2 5 1268 6904 173 75 98 chr15 89531585 89532973 -13962001 - L1Md_F LINE L1 -4287 1596 244 5 1268 262 198 0 157 chr15 89532974 89533082 -13961892 - RLTR25A LTR ERVK -491 612 522 5 1268 888 79 0 23 chr15 89532998 89533127 -13961847 - B1_Mm SINE Alu -21 126 1 5 1268 481 244 63 0 chr15 89533014 89533141 -13961833 - B4 SINE B4 -88 204 70 5 1268 1968 140 23 3 chr15 89533277 89533621 -13961353 + RLTR15 LTR ERVK 1 351 -8 5 1268 353 328 8 8 chr15 89533843 89533963 -13961011 + CT-rich Low_complexity Low_complexity 2 121 0 5 1268 21 0 0 0 chr15 89534102 89534123 -13960851 + AT_rich Low_complexity Low_complexity 1 21 0 5 1268 2707 199 72 15 chr15 89534678 89535289 -13959685 + Lx2B LINE L1 6355 7000 0 5 1268 1074 64 0 0 chr15 89535760 89535901 -13959073 + B1_Mus2 SINE Alu 7 147 0 5 1268 217 191 0 29 chr15 89535901 89535971 -13959003 + A-rich Low_complexity Low_complexity 3 70 0 6 1268 26 74 0 0 chr15 89536491 89536545 -13958429 + AT_rich Low_complexity Low_complexity 1 54 0 6 1268 615 237 84 0 chr15 89537685 89537816 -13957158 - B1_Mur1 SINE Alu -7 142 1 6 1268 325 297 99 25 chr15 89537714 89537835 -13957139 - B4 SINE B4 -94 198 69 6 1268 264 341 11 43 chr15 89538178 89538270 -13956704 + RSINE1 SINE B4 2 90 -75 6 1268 2083 132 95 0 chr15 89538270 89538525 -13956449 + MERVL_2A-int LTR ERVL 5276 5559 -202 6 1268 246 62 0 0 chr15 89538525 89538557 -13956417 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 6 1268 2083 132 95 0 chr15 89538557 89538679 -13956295 + MERVL_2A-int LTR ERVL 5560 5688 -73 6 1268 248 243 41 41 chr15 89538688 89538761 -13956213 + ORR1A3-int LTR MaLR 567 639 -1324 6 1268 302 161 0 0 chr15 89538761 89538817 -13956157 + MERVL_2A-int LTR ERVL 5706 5761 0 6 1268 271 264 0 22 chr15 89538817 89538850 -13956124 + Ricksha_c DNA MuDR 292 378 -1670 6 1268 239 216 39 0 chr15 89538852 89538903 -13956071 + MT2B LTR ERVL 52 104 -429 6 1268 3115 208 27 16 chr15 89538903 89539568 -13955406 - Lx5 LINE L1 -5 7045 6374 7 1268 244 132 151 0 chr15 89539612 89539665 -13955309 - RMER1B Other Other -8 1058 998 7 1268 2617 197 64 4 chr15 89539689 89540235 -13954739 - RMER1B Other Other -135 931 353 7 1268 1031 240 39 135 chr15 89540280 89540665 -13954309 + MT2B LTR ERVL 254 601 0 6 1268 2077 94 0 102 chr15 89540699 89541043 -13953931 + RLTR10E LTR ERVK 1 309 -2 7 1268 3015 119 0 5 chr15 89541227 89541664 -13953310 - RLTR10C LTR ERVK -1 435 1 7 1268 3992 96 6 6 chr15 89541664 89542602 -13952372 - MMERVK10C-int LTR ERVK 0 7680 6718 7 1268 3474 66 0 8 chr15 89542600 89543076 -13951898 - MMERVK10C-int LTR ERVK -4595 2986 2515 7 1268 357 111 0 0 chr15 89543075 89543138 -13951836 - MMERVK10C-int LTR ERVK -5634 1947 1885 7 1268 418 161 123 0 chr15 89543129 89543210 -13951764 - MMERVK10C-int LTR ERVK -5109 1028 938 7 1268 1356 171 115 48 chr15 89543213 89543653 -13951321 - MMERVK10C-int LTR ERVK -4750 656 318 7 1268 391 155 0 72 chr15 89543749 89543888 -13951086 - MMERVK10C-int LTR ERVK -6629 952 824 7 1268 4433 103 17 23 chr15 89543882 89544584 -13950390 - MMERVK10C-int LTR ERVK -6662 919 222 7 1268 253 214 0 0 chr15 89544584 89544626 -13950348 - RLTR27 LTR ERVK -37 272 231 7 1268 564 130 10 20 chr15 89544626 89544728 -13950246 - MMERVK10C-int LTR ERVK -7478 103 3 7 1268 3007 120 0 5 chr15 89544730 89545165 -13949809 - RLTR10C LTR ERVK -3 433 1 7 1268 433 164 12 2 chr15 89545191 89545299 -13949675 + B1_Mus2 SINE Alu 43 150 0 7 1268 201 39 0 0 chr15 89545358 89545384 -13949590 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 7 1268 238 241 187 28 chr15 89545821 89545979 -13948995 - MIR SINE MIR -22 186 1 7 1268 815 156 6 0 chr15 89546106 89546285 -13948689 + GA-rich Low_complexity Low_complexity 1 180 0 7 1268 977 106 0 12 chr15 89546297 89546560 -13948414 + (GGGAGA)n Simple_repeat Simple_repeat 1 259 0 8 1268 234 0 0 0 chr15 89548050 89548076 -13946898 + (T)n Simple_repeat Simple_repeat 1 26 0 8 1268 657 287 30 27 chr15 89548084 89548414 -13946560 - L1MA7 LINE L1 -373 5918 5588 8 1268 21 57 0 0 chr15 89549109 89549144 -13945830 + AT_rich Low_complexity Low_complexity 1 35 0 8 1268 204 97 0 0 chr15 89549368 89549399 -13945575 + (A)n Simple_repeat Simple_repeat 1 31 0 8 1268 21 0 0 0 chr15 89549676 89549697 -13945277 + AT_rich Low_complexity Low_complexity 1 21 0 8 1268 26 0 0 0 chr15 89550005 89550031 -13944943 + AT_rich Low_complexity Low_complexity 1 26 0 8 1268 353 229 17 76 chr15 89550341 89550459 -13944515 - ORR1D2 LTR MaLR 0 370 260 8 1268 6659 39 4 1 chr15 89550459 89551334 -13943640 + L1Md_F2 LINE L1 5718 6582 0 8 1268 1822 193 56 13 chr15 89551334 89551727 -13943247 + Lx5 LINE L1 6636 7045 -5 8 1268 2180 167 50 0 chr15 89552142 89552543 -13942431 - MTC LTR MaLR 0 421 1 9 1268 528 16 0 0 chr15 89553350 89553411 -13941563 + (CA)n Simple_repeat Simple_repeat 2 62 0 9 1268 2239 115 62 3 chr15 89553633 89553972 -13941002 + ORR1B2 LTR MaLR 1 359 -8 9 1268 27 0 0 0 chr15 89554312 89554339 -13940635 + AT_rich Low_complexity Low_complexity 1 27 0 9 1268 317 119 34 0 chr15 89555266 89555325 -13939649 + (TCTG)n Simple_repeat Simple_repeat 2 62 0 9 1268 374 265 0 0 chr15 89555517 89555600 -13939374 + B3 SINE B2 3 85 -131 9 1268 1632 160 30 35 chr15 89555639 89556017 -13938957 + Lx4B LINE L1 6624 7058 0 9 1268 23 78 0 0 chr15 89556167 89556218 -13938756 + AT_rich Low_complexity Low_complexity 1 51 0 9 1268 906 229 58 10 chr15 89556255 89556463 -13938511 + MTD LTR MaLR 3 203 -193 9 1268 195 42 0 0 chr15 89556464 89556488 -13938486 + (TGGG)n Simple_repeat Simple_repeat 3 26 0 9 1268 608 270 95 42 chr15 89556521 89556576 -13938398 + MTD LTR MaLR 124 182 -218 1 1268 278 50 25 0 chr15 89556576 89556616 -13938358 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1 1268 962 222 77 0 chr15 89556616 89556823 -13938151 + MTD LTR MaLR 197 419 0 1 1268 447 101 0 0 chr15 89557073 89557152 -13937822 + (GA)n Simple_repeat Simple_repeat 1 79 0 1 1268 731 66 9 0 chr15 89557152 89557258 -13937716 + (GAA)n Simple_repeat Simple_repeat 3 109 0 1 1268 1136 62 0 14 chr15 89557642 89557789 -13937185 + B1_Mus1 SINE Alu 4 148 0 1 1268 797 327 65 45 chr15 89557917 89558451 -13936523 + Kanga11a DNA Tc2 133 677 -293 1 1268 853 276 39 74 chr15 89559722 89560031 -13934943 + ORR1E LTR MaLR 19 316 -43 1 1268 3532 181 34 195 chr15 89560038 89560144 -13934830 - RMER1B Other Other -13 1053 955 1 1268 531 0 0 0 chr15 89560144 89560203 -13934771 + (CAAAC)n Simple_repeat Simple_repeat 5 63 0 1 1268 3532 181 34 195 chr15 89560203 89560242 -13934732 - RMER1B Other Other -112 954 939 1 1268 366 23 0 0 chr15 89560242 89560285 -13934689 + (CCA)n Simple_repeat Simple_repeat 1 43 0 1 1268 3532 181 34 195 chr15 89560285 89561380 -13933594 - RMER1B Other Other -128 938 12 1 1268 7355 210 36 35 chr15 89561419 89563650 -13931324 - L1_Mur3 LINE L1 -2544 3336 1095 1 1268 529 176 52 37 chr15 89563770 89563906 -13931068 - L1_Rod LINE L1 -2499 3348 3211 1 1268 188 273 121 33 chr15 89564266 89564357 -13930617 - L2c LINE L2 -310 3077 2979 1 1268 225 0 0 0 chr15 89565522 89565547 -13929427 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1268 313 253 33 11 chr15 89565562 89565654 -13929320 + L1MD LINE L1 5381 5474 -885 1 1268 228 282 13 0 chr15 89565731 89565809 -13929165 + L1MD LINE L1 5657 5735 -507 1 1268 472 107 29 19 chr15 89566004 89566109 -13928865 + GA-rich Low_complexity Low_complexity 1 106 0 1 1268 395 245 19 9 chr15 89566220 89566327 -13928647 + ORR1E LTR MaLR 271 378 -1 1 1268 6860 206 62 50 chr15 89566942 89569140 -13925834 + Lx7 LINE L1 5191 7405 -291 1 1268 1486 48 16 5 chr15 89569140 89569327 -13925647 - B2_Mm2 SINE B2 -3 192 4 1 1268 6860 215 80 57 chr15 89569327 89569347 -13925627 + Lx7 LINE L1 7406 7421 -275 1 1268 471 48 0 0 chr15 89569347 89569409 -13925565 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 1268 6860 215 80 57 chr15 89569409 89569662 -13925312 + Lx7 LINE L1 7422 7695 -1 1 1268 222 366 103 38 chr15 89570107 89570368 -13924606 + L2c LINE L2 3093 3370 -17 1 1268 464 300 161 37 chr15 89571266 89571539 -13923435 + ORR1E LTR MaLR 4 310 -49 1 1268 962 92 0 0 chr15 89572816 89572946 -13922028 - B3 SINE B2 -86 130 1 1 1268 21 0 0 0 chr15 89573816 89573837 -13921137 + AT_rich Low_complexity Low_complexity 1 21 0 1 1268 400 305 39 14 chr15 89574006 89574255 -13920719 + MURVY-int LTR ERV1 7156 7528 -78 1 1268 1664 170 29 104 chr15 89574369 89574716 -13920258 + RLTR41 LTR ERV1 62 382 -64 1 1268 555 239 61 77 chr15 89574864 89575045 -13919929 + MTE2b LTR MaLR 19 196 -183 1 1268 600 217 42 0 chr15 89575315 89575435 -13919539 + MTE2b LTR MaLR 216 340 -39 1 1268 665 358 12 55 chr15 89576952 89577206 -13917768 + B4A SINE B4 2 244 -48 1 1268 259 219 15 59 chr15 89577688 89577756 -13917218 - ORR1E LTR MaLR -289 70 6 1 1268 21 0 0 0 chr15 89577814 89577835 -13917139 + AT_rich Low_complexity Low_complexity 1 21 0 1 1268 287 136 0 17 chr15 89577957 89578017 -13916957 + GA-rich Low_complexity Low_complexity 2 60 0 1 1268 760 190 123 11 chr15 89578074 89578514 -13916460 + L1_Rod LINE L1 1051 1537 -4310 1 1268 309 261 73 40 chr15 89578527 89578651 -13916323 + L1_Rod LINE L1 4017 4144 -1703 1 1268 2862 68 0 0 chr15 89578661 89579044 -13915930 - L1Md_F2 LINE L1 -809 5074 4692 1 1268 3829 53 4 0 chr15 89579037 89579542 -13915432 + L1Md_F2 LINE L1 5080 5586 -297 1 1268 8176 42 4 0 chr15 89579542 89580533 -13914441 + L1Md_F2 LINE L1 5587 6581 -1 1 1268 669 300 72 11 chr15 89580559 89580933 -13914041 + L1_Mur3 LINE L1 4172 4568 -1312 1 1268 462 244 55 21 chr15 89580921 89581084 -13913890 + L1_Rod LINE L1 4840 5067 -1079 1 1268 4309 257 52 20 chr15 89582274 89583821 -13911153 - L1_Mur3 LINE L1 -1076 4804 3209 1 1268 2513 147 37 15 chr15 89583821 89584277 -13910697 + Lx3C LINE L1 6509 6974 -2 1 1268 27 49 0 0 chr15 89584277 89584318 -13910656 + AT_rich Low_complexity Low_complexity 1 41 0 1 1268 202 365 77 17 chr15 89584805 89584922 -13910052 + L2 LINE L2 1412 1535 -1884 1 1268 590 256 105 8 chr15 89585334 89585582 -13909392 + L1M2 LINE L1 5520 5791 -521 1 1268 220 154 94 19 chr15 89585941 89586104 -13908870 + (TTATA)n Simple_repeat Simple_repeat 1 175 0 1 1268 22 0 0 0 chr15 89586523 89586545 -13908429 + AT_rich Low_complexity Low_complexity 1 22 0 1 1268 270 297 163 6 chr15 89586876 89586906 -13908068 + CYRA11_Mm Unknown Y-chromosome 129 184 -433 1 1268 899 149 96 11 chr15 89586906 89587083 -13907891 - URR1A DNA MER1_type 0 226 35 1 1268 414 0 0 0 chr15 89588509 89588555 -13906419 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 1268 3183 67 10 0 chr15 89589271 89589688 -13905286 - BGLII LTR ERVK 0 421 1 1 1268 506 199 39 58 chr15 89589917 89590071 -13904903 + RLTR40 LTR ERVK 19 169 -648 1 1268 825 169 16 10 chr15 89590071 89590316 -13904658 - ORR1C1 LTR MaLR 0 378 70 1 1268 23 54 0 0 chr15 89590466 89590503 -13904471 + AT_rich Low_complexity Low_complexity 1 37 0 1 1268 395 264 27 54 chr15 89590516 89590628 -13904346 - RSINE1 SINE B4 -2 163 55 1 1268 248 344 0 53 chr15 89590896 89590991 -13903983 - RSINE1 SINE B4 -60 105 16 1 1268 3308 33 5 5 chr15 89591024 89591420 -13903554 + MTA_Mm LTR MaLR 1 396 0 1 1268 191 81 0 51 chr15 89592872 89592911 -13902063 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 1 1268 7222 63 23 0 chr15 89592914 89594159 -13900815 - L1_Mus1 LINE L1 -1 6566 5293 1 1268 4807 104 10 0 chr15 89594157 89594885 -13900089 + L1_Mus1 LINE L1 4523 5257 -626 1 1268 427 198 12 12 chr15 89594917 89594999 -13899975 + RLTR42-int LTR ERVK 1694 1775 -3747 1 1268 1184 30 0 0 chr15 89595751 89595919 -13899055 + RLTR45-int LTR ERVK 1010 1177 -6067 1 1268 979 46 0 101 chr15 89596097 89596265 -13898709 + RLTR45-int LTR ERVK 1176 1326 -5918 1 1268 207 191 0 0 chr15 89596765 89596807 -13898167 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1268 306 0 0 0 chr15 89597182 89597216 -13897758 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1268 3467 13 8 0 chr15 89598754 89599147 -13895827 - MTA_Mm LTR MaLR 0 396 1 1 1268 1221 237 52 87 chr15 89599890 89600090 -13894884 + RLTR42-int LTR ERVK 4263 4474 -1048 1 1268 1030 37 7 7 chr15 89600090 89600226 -13894748 + (TTC)n Simple_repeat Simple_repeat 3 138 0 1 1268 1221 237 52 87 chr15 89600226 89600464 -13894510 + RLTR42-int LTR ERVK 4475 4685 -837 1 1268 988 244 71 43 chr15 89600492 89600860 -13894114 + RLTR42-int LTR ERVK 4800 5177 -345 1 1268 7311 67 0 7 chr15 89601378 89602364 -13892610 - L1_Mus1 LINE L1 -2 6565 5587 1 1268 493 286 91 15 chr15 89602539 89602738 -13892236 + RLTR42-int LTR ERVK 5193 5406 -116 1 1268 32 43 0 0 chr15 89603225 89603271 -13891703 + AT_rich Low_complexity Low_complexity 1 46 0 1 1268 4410 133 3 10 chr15 89603610 89604280 -13890694 - Lx4A LINE L1 0 7058 6394 1 1268 23 33 0 0 chr15 89604576 89604606 -13890368 + AT_rich Low_complexity Low_complexity 1 30 0 1 1268 24 32 0 0 chr15 89604693 89604724 -13890250 + AT_rich Low_complexity Low_complexity 1 31 0 1 1268 269 109 22 0 chr15 89604797 89604843 -13890131 + (GGGGA)n Simple_repeat Simple_repeat 1 47 0 1 1268 678 47 0 0 chr15 89605301 89605387 -13889587 + (TTCC)n Simple_repeat Simple_repeat 3 88 0 1 1268 714 242 131 41 chr15 89605633 89605947 -13889027 - RLTR15 LTR ERVK -17 342 1 1 1268 278 276 13 0 chr15 89607110 89607186 -13887788 - ID2 SINE ID -5 78 2 1 1268 26 50 0 0 chr15 89607406 89607446 -13887528 + AT_rich Low_complexity Low_complexity 1 40 0 1 1268 1185 61 0 0 chr15 89613377 89613524 -13881450 - B1_Mus2 SINE Alu 0 147 1 1 1268 233 330 183 39 chr15 89613585 89613793 -13881181 + ORR1E LTR MaLR 4 241 -133 1 1268 184 114 22 43 chr15 89613831 89613877 -13881097 + (TTATA)n Simple_repeat Simple_repeat 5 49 0 1 1268 319 298 12 14 chr15 89613881 89613989 -13880985 + ORR1E LTR MaLR 253 355 -15 1 1268 438 20 0 0 chr15 89614163 89614214 -13880760 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1 1268 625 172 76 76 chr15 89614251 89614368 -13880606 + ORR1C2 LTR MaLR 228 350 -34 1 1268 1181 68 0 0 chr15 89614368 89614516 -13880458 - B1_Mus1 SINE Alu 0 148 1 1 1268 625 172 76 76 chr15 89614516 89614555 -13880419 + ORR1C2 LTR MaLR 351 384 0 1 1268 545 209 12 0 chr15 89614555 89614727 -13880247 + (TATG)n Simple_repeat Simple_repeat 2 175 0 1 1268 656 273 70 26 chr15 89614899 89615170 -13879804 - RLTR15 LTR ERVK -76 283 1 1 1268 22 0 0 0 chr15 89615391 89615413 -13879561 + AT_rich Low_complexity Low_complexity 1 22 0 1 1268 914 36 0 0 chr15 89616011 89616123 -13878851 + L1Md_T LINE L1 5474 5585 -298 1 1268 8408 37 0 0 chr15 89616124 89617120 -13877854 + L1Md_T LINE L1 5587 6582 0 1 1268 207 0 0 0 chr15 89617146 89617169 -13877805 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1268 386 272 29 19 chr15 89617706 89617811 -13877163 + Tigger7 DNA MER2_type 3 108 -2383 1 1268 522 246 94 50 chr15 89617805 89618006 -13876968 + Tigger7 DNA MER2_type 2282 2491 0 1 1268 1194 100 0 0 chr15 89618197 89618377 -13876597 + (CCAA)n Simple_repeat Simple_repeat 1 180 0 1 1268 1215 94 0 0 chr15 89618389 89618569 -13876405 + (CCAA)n Simple_repeat Simple_repeat 1 180 0 1 1268 384 97 0 0 chr15 89618569 89618630 -13876344 + (CAGC)n Simple_repeat Simple_repeat 1 62 0 1 1268 2143 211 55 12 chr15 89619132 89619693 -13875281 - Lx9 LINE L1 -1 7643 7059 1 1268 267 108 40 13 chr15 89619806 89619881 -13875093 + A-rich Low_complexity Low_complexity 2 78 0 1 1268 407 292 115 16 chr15 89619972 89620094 -13874880 - ID_B1 SINE B4 -1 223 90 1 1268 225 0 0 0 chr15 89621763 89621788 -13873186 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1268 693 151 0 0 chr15 89622673 89622792 -13872182 + GA-rich Low_complexity Low_complexity 4 122 0 1 1268 363 60 0 0 chr15 89623698 89623748 -13871226 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1268 225 250 0 29 chr15 89624110 89624180 -13870794 + T-rich Low_complexity Low_complexity 2 69 0 1 1268 225 0 0 0 chr15 89624220 89624245 -13870729 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1268 782 314 24 47 chr15 89624258 89624512 -13870462 - B4A SINE B4 -4 288 41 1 1268 306 309 22 87 chr15 89625250 89625388 -13869586 + RSINE1 SINE B4 37 165 0 1 1268 917 254 75 26 chr15 89625678 89626025 -13868949 - L1_Mur3 LINE L1 -1537 4343 3980 1 1268 669 296 86 39 chr15 89626025 89626753 -13868221 + L1MA4A LINE L1 4651 5426 -758 1 1268 412 279 87 87 chr15 89626757 89626906 -13868068 + B4A SINE B4 3 151 -141 1 1268 786 275 24 35 chr15 89626993 89627374 -13867600 + L1MA4A LINE L1 5497 5876 -427 1 1268 363 44 0 0 chr15 89627448 89627493 -13867481 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1268 1211 287 87 70 chr15 89627655 89628276 -13866698 + Lx8 LINE L1 3953 4570 -1310 1 1268 357 129 0 0 chr15 89628276 89628346 -13866628 + (CAGA)n Simple_repeat Simple_repeat 1 70 0 1 1268 1211 287 87 70 chr15 89628346 89628766 -13866208 + Lx8 LINE L1 4571 5012 -868 1 1268 1191 281 110 32 chr15 89629265 89630057 -13864917 + Lx8 LINE L1 5043 5927 -1546 1 1268 1735 269 64 92 chr15 89630308 89631101 -13863873 + Lx8 LINE L1 6492 7262 -211 1 1268 432 0 0 0 chr15 89631172 89631220 -13863754 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1268 498 161 11 11 chr15 89631220 89631308 -13863666 + MT2A LTR ERVL 23 110 -423 2 1268 261 128 0 0 chr15 89631305 89631344 -13863630 + MT2A LTR ERVL 383 421 -112 2 1268 915 276 90 31 chr15 89631348 89631703 -13863271 + MERVL_2A-int LTR ERVL 726 1101 -4660 2 1268 6346 200 71 18 chr15 89631692 89633101 -13861873 + MERVL_2A-int LTR ERVL 3725 5208 -553 2 1268 252 0 0 0 chr15 89633122 89633150 -13861824 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 1268 26 30 0 0 chr15 89633212 89633245 -13861729 + AT_rich Low_complexity Low_complexity 1 33 0 2 1268 265 271 0 0 chr15 89633292 89633351 -13861623 + (CTAA)n Simple_repeat Simple_repeat 2 60 0 2 1268 263 195 143 0 chr15 89633698 89633775 -13861199 + Tigger15a DNA TcMar 492 579 -136 2 1268 807 305 20 56 chr15 89634392 89634694 -13860280 + B4A SINE B4 2 292 0 2 1268 770 245 116 5 chr15 89635506 89635695 -13859279 + B3 SINE B2 1 210 -6 2 1268 378 252 18 53 chr15 89637208 89637321 -13857653 - PB1D10 SINE Alu -8 109 1 2 1268 669 288 17 29 chr15 89637321 89637395 -13857579 - ID SINE ID -145 79 8 2 1268 29 28 0 0 chr15 89637777 89637813 -13857161 + AT_rich Low_complexity Low_complexity 1 36 0 2 1268 24 32 0 0 chr15 89637930 89637961 -13857013 + AT_rich Low_complexity Low_complexity 1 31 0 2 1268 180 0 0 0 chr15 89638038 89638058 -13856916 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1268 2172 44 26 0 chr15 89638101 89638374 -13856600 - L1Md_F2 LINE L1 0 6582 6303 2 1268 6310 58 4 2 chr15 89638410 89639244 -13855730 + L1_Mm LINE L1 4752 5586 -297 2 1268 8031 50 0 6 chr15 89639244 89640234 -13854740 + L1Md_F2 LINE L1 5587 6570 -12 2 1268 481 288 6 86 chr15 89640325 89640500 -13854474 + RSINE1 SINE B4 3 163 -2 2 1268 207 0 0 0 chr15 89640503 89640526 -13854448 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 2 1268 36 23 0 0 chr15 89641792 89641835 -13853139 + AT_rich Low_complexity Low_complexity 1 43 0 2 1268 378 264 45 11 chr15 89641859 89641947 -13853027 + B1F2 SINE Alu 10 100 -49 2 1268 29 47 0 0 chr15 89641992 89642035 -13852939 + AT_rich Low_complexity Low_complexity 1 43 0 2 1268 2333 81 18 59 chr15 89642148 89642489 -13852485 - ORR1A2 LTR MaLR 0 327 1 2 1268 1266 75 20 46 chr15 89642873 89643070 -13851904 - B2_Mm2 SINE B2 0 195 4 2 1268 374 347 7 26 chr15 89643556 89643710 -13851264 + RSINE1 SINE B4 4 154 -11 2 1268 186 174 0 0 chr15 89643729 89643775 -13851199 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1268 441 0 0 0 chr15 89645966 89646015 -13848959 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1268 192 330 176 48 chr15 89646965 89647407 -13847567 + L2 LINE L2 499 997 -2422 2 1268 1480 254 34 3 chr15 89647569 89647921 -13847053 - MTD LTR MaLR -54 365 3 2 1268 752 244 168 4 chr15 89647928 89648148 -13846826 - MTD-int LTR MaLR -2 1256 998 2 1268 246 128 0 0 chr15 89648148 89648187 -13846787 + (TA)n Simple_repeat Simple_repeat 2 40 0 2 1268 752 244 168 4 chr15 89648187 89648246 -13846728 - MTD-int LTR MaLR -261 997 932 2 1268 3524 200 23 21 chr15 89648270 89649127 -13845847 + Lx9 LINE L1 1326 2184 -3663 2 1268 2972 212 30 147 chr15 89649127 89649737 -13845237 + Lx9 LINE L1 4681 5213 -634 2 1268 459 0 0 0 chr15 89649737 89649788 -13845186 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1268 2972 226 101 84 chr15 89649788 89651328 -13843646 + Lx9 LINE L1 5214 6864 -780 2 1268 803 176 71 0 chr15 89651331 89651501 -13843473 + Lx9 LINE L1 7302 7483 -161 2 1268 252 0 0 0 chr15 89651922 89651950 -13843024 + (ATCTG)n Simple_repeat Simple_repeat 1 28 0 2 1268 430 129 7 67 chr15 89652235 89652385 -13842589 + (TA)n Simple_repeat Simple_repeat 2 142 0 2 1268 435 19 0 0 chr15 89652387 89652439 -13842535 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1268 24 0 0 0 chr15 89652790 89652814 -13842160 + AT_rich Low_complexity Low_complexity 1 24 0 2 1269 423 0 0 0 chr15 89653823 89653870 -13841104 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1269 2725 48 37 67 chr15 89654532 89654908 -13840066 + RLTR10B2 LTR ERVK 1 365 0 2 1269 36 40 0 0 chr15 89655400 89655450 -13839524 + AT_rich Low_complexity Low_complexity 1 50 0 2 1269 732 322 216 16 chr15 89655651 89655968 -13839006 + MER44D DNA MER2_type 33 392 -313 2 1269 927 0 0 0 chr15 89655968 89656071 -13838903 + (TTC)n Simple_repeat Simple_repeat 3 105 0 2 1269 732 322 216 16 chr15 89656071 89656309 -13838665 + MER44D DNA MER2_type 393 698 -7 2 1269 306 0 0 0 chr15 89656787 89656821 -13838153 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1269 242 218 0 18 chr15 89658075 89658131 -13836843 + MLT1A0 LTR MaLR 4 59 -315 2 1269 396 367 23 91 chr15 89658151 89658266 -13836708 + MTEa LTR MaLR 14 119 -260 2 1269 1151 151 30 72 chr15 89658266 89658502 -13836472 - URR1A DNA MER1_type 0 226 1 2 1269 396 367 23 91 chr15 89658502 89658605 -13836369 + MTEa LTR MaLR 120 217 -162 2 1269 503 329 34 51 chr15 89658698 89658935 -13836039 + MLT1A0 LTR MaLR 72 304 -61 2 1269 1645 68 25 8 chr15 89658959 89659195 -13835779 + Lx3B LINE L1 6258 6497 -476 2 1269 360 284 57 6 chr15 89659195 89659326 -13835648 + MLT1A0 LTR MaLR 257 463 -4 2 1269 567 300 120 36 chr15 89659475 89659942 -13835032 + L1MC3 LINE L1 7270 7775 -10 2 1269 278 274 0 14 chr15 89660192 89660266 -13834708 + MLT1B LTR MaLR 18 90 -377 2 1269 460 265 207 41 chr15 89660342 89660395 -13834579 + MLT1B LTR MaLR 191 243 -147 2 1269 2519 157 2 19 chr15 89660395 89660823 -13834151 - MTC LTR MaLR 0 421 1 2 1269 460 265 207 41 chr15 89660823 89660938 -13834036 + MLT1B LTR MaLR 244 387 -3 2 1269 25 0 0 0 chr15 89660938 89660963 -13834011 + AT_rich Low_complexity Low_complexity 1 25 0 2 1269 304 245 77 19 chr15 89662043 89662147 -13832827 + MLT1A0 LTR MaLR 252 361 -4 2 1269 36 53 0 0 chr15 89662214 89662271 -13832703 + AT_rich Low_complexity Low_complexity 1 57 0 2 1269 261 0 0 0 chr15 89662711 89662740 -13832234 + (TC)n Simple_repeat Simple_repeat 2 30 0 2 1269 1031 163 112 10 chr15 89664133 89664338 -13830636 + URR1A DNA MER1_type 1 226 0 2 1269 354 286 60 129 chr15 89664696 89664768 -13830206 + Kanga1 DNA Tc2 1428 1485 -260 2 1269 265 284 13 26 chr15 89664768 89664844 -13830130 + ID4 SINE ID 5 79 -4 2 1269 354 286 60 129 chr15 89664844 89665004 -13829970 + Kanga1 DNA Tc2 1486 1644 -101 2 1269 1466 211 91 62 chr15 89665007 89665265 -13829709 + Lx9 LINE L1 7088 7336 -308 2 1269 3761 101 2 6 chr15 89665265 89665803 -13829171 + Lx LINE L1 6113 6648 -6 2 1269 1466 211 91 62 chr15 89665803 89666029 -13828945 + Lx9 LINE L1 7337 7586 -58 2 1269 519 335 11 0 chr15 89666355 89666537 -13828437 - MER2 DNA MER2_type -58 287 104 2 1269 21 0 0 0 chr15 89666871 89666892 -13828082 + AT_rich Low_complexity Low_complexity 1 21 0 2 1269 189 0 0 0 chr15 89666918 89666939 -13828035 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1269 363 96 55 0 chr15 89666939 89667012 -13827962 + (CATATA)n Simple_repeat Simple_repeat 2 78 0 2 1269 973 236 29 0 chr15 89667534 89667742 -13827232 + B3 SINE B2 3 216 0 2 1269 340 297 93 13 chr15 89668479 89668629 -13826345 + Tigger5 DNA MER2_type 2 163 -2243 2 1269 1751 22 52 0 chr15 89669476 89669706 -13825268 + L1Md_F2 LINE L1 6333 6574 -8 2 1269 282 29 0 0 chr15 89670974 89671009 -13823965 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1269 183 100 0 0 chr15 89671132 89671162 -13823812 + (C)n Simple_repeat Simple_repeat 1 30 0 2 1269 23 0 0 0 chr15 89672627 89672650 -13822324 + AT_rich Low_complexity Low_complexity 1 23 0 2 1269 918 241 120 24 chr15 89673273 89673697 -13821277 + Lx7 LINE L1 330 794 -6934 2 1269 464 232 49 70 chr15 89673697 89673844 -13821130 - ORR1C1 LTR MaLR -267 127 1 2 1269 2798 239 24 1 chr15 89673844 89674503 -13820471 + Lx7 LINE L1 6048 6721 -975 2 1269 979 218 73 118 chr15 89674534 89674801 -13820173 + Lx7 LINE L1 7161 7392 -304 2 1269 3234 43 15 2 chr15 89674801 89675196 -13819778 + MTB LTR MaLR 1 400 0 2 1269 979 218 73 118 chr15 89675196 89675489 -13819485 + Lx7 LINE L1 7393 7696 0 2 1269 196 93 70 0 chr15 89675829 89675872 -13819102 + T-rich Low_complexity Low_complexity 2 47 0 2 1269 1159 192 5 36 chr15 89676298 89676519 -13818455 - URR1B DNA MER1_type -11 214 1 2 1269 382 65 0 31 chr15 89677011 89677075 -13817899 + (CAA)n Simple_repeat Simple_repeat 1 62 0 2 1269 297 0 0 0 chr15 89677171 89677204 -13817770 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 1269 19537 121 23 14 chr15 89677493 89681045 -13813929 - Lx4A LINE L1 -2 7056 3480 2 1269 180 0 0 0 chr15 89681045 89681065 -13813909 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1269 19537 113 29 16 chr15 89681065 89682045 -13812929 - Lx4A LINE L1 -2398 3479 2473 2 1269 414 0 0 0 chr15 89682059 89682105 -13812869 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1269 361 311 35 30 chr15 89682110 89682279 -13812695 - Lx8 LINE L1 -520 6953 6784 2 1269 807 284 92 17 chr15 89682288 89682641 -13812333 - L1_Mur3 LINE L1 -464 5416 5026 2 1269 419 184 48 0 chr15 89682640 89682743 -13812231 - L1M3 LINE L1 -1137 5003 4896 2 1269 907 162 0 12 chr15 89682759 89682928 -13812046 - Lx2B LINE L1 -13 6987 6821 2 1269 1721 252 88 15 chr15 89683528 89684132 -13810842 - L1_Mur3 LINE L1 -1060 4820 4173 2 1269 1905 279 89 20 chr15 89684575 89685645 -13809329 - L1_Mur3 LINE L1 -1938 4205 3067 2 1269 1384 331 45 27 chr15 89686159 89687206 -13807768 - L1_Mur3 LINE L1 -3100 3043 1945 2 1269 957 189 56 42 chr15 89687249 89687465 -13807509 - ORR1C2 LTR MaLR 0 384 166 2 1269 444 104 0 0 chr15 89687465 89687532 -13807442 + (CAGA)n Simple_repeat Simple_repeat 2 68 0 2 1269 7718 42 5 1 chr15 89687708 89688847 -13806127 - L1Md_F2 LINE L1 0 6582 5440 2 1269 182 167 50 100 chr15 89688974 89689016 -13805958 - L2 LINE L2 -1302 2117 2078 2 1269 1314 52 0 0 chr15 89689016 89689325 -13805649 + (TG)n Simple_repeat Simple_repeat 1 309 0 2 1269 182 167 50 100 chr15 89689325 89689340 -13805634 - L2 LINE L2 -1342 2077 2061 2 1269 32304 81 14 6 chr15 89689448 89695603 -13799371 - L1Md_F2 LINE L1 0 6582 382 2 1269 329 264 26 35 chr15 89696610 89696724 -13798250 + RMER1B Other Other 303 415 -651 2 1269 595 105 63 0 chr15 89696699 89696794 -13798180 + RMER1B Other Other 544 644 -422 2 1269 321 286 82 46 chr15 89697000 89697194 -13797780 + L1M3e LINE L1 43 243 -6787 2 1269 838 252 20 25 chr15 89697436 89697639 -13797335 + B3 SINE B2 1 202 -14 2 1269 636 119 25 0 chr15 89697645 89697763 -13797211 + (TA)n Simple_repeat Simple_repeat 1 121 0 2 1269 871 175 23 0 chr15 89697780 89697957 -13797017 - Lx7 LINE L1 0 7696 7516 2 1269 290 252 185 0 chr15 89697959 89698094 -13796880 - Lx7 LINE L1 -1627 6069 5910 2 1269 5284 179 62 18 chr15 89698094 89699315 -13795659 + L1_Mur3 LINE L1 4225 5499 -381 2 1269 855 70 0 8 chr15 89699404 89699533 -13795441 - L1Md_F3 LINE L1 -1 6583 6456 2 1269 858 91 0 0 chr15 89699565 89699686 -13795288 + (TCCC)n Simple_repeat Simple_repeat 4 124 0 2 1269 239 302 0 0 chr15 89700187 89700273 -13794701 - L1M3c LINE L1 -4518 1623 1538 2 1269 21 0 0 0 chr15 89700472 89700493 -13794481 + AT_rich Low_complexity Low_complexity 1 21 0 2 1269 6745 87 34 35 chr15 89700561 89702137 -13792837 - L1_Mus3 LINE L1 0 6638 5060 2 1269 25 0 0 0 chr15 89702262 89702287 -13792687 + AT_rich Low_complexity Low_complexity 1 25 0 3 1269 1149 252 72 25 chr15 89702584 89702902 -13792072 + ORR1D1 LTR MaLR 1 333 -41 3 1269 1125 49 0 0 chr15 89702902 89703046 -13791928 + L1Md_F2 LINE L1 5443 5586 -297 3 1269 8043 40 18 0 chr15 89703046 89704023 -13790951 + L1Md_F2 LINE L1 5587 6581 -1 3 1269 318 300 139 13 chr15 89704411 89704641 -13790333 - MERVL_2A-int LTR ERVL -4657 1057 799 3 1269 578 323 68 15 chr15 89704659 89704983 -13789991 - MERVL_2A-int LTR ERVL -4934 827 487 3 1269 3628 215 149 18 chr15 89706313 89707508 -13787466 + Lx7 LINE L1 6244 7594 -102 3 1269 417 189 0 0 chr15 89707606 89707701 -13787273 + GA-rich Low_complexity Low_complexity 3 97 0 3 1269 268 331 66 22 chr15 89707930 89708187 -13786787 + L1MA5 LINE L1 5670 5936 -367 3 1269 725 364 47 53 chr15 89708516 89709363 -13785611 + ERVL-E-int LTR ERVL 372 1213 -4454 3 1269 286 245 124 67 chr15 89709538 89709643 -13785331 + ERVL-E-int LTR ERVL 1442 1552 -4115 3 1269 4501 166 54 47 chr15 89709901 89710925 -13784049 + Lx5 LINE L1 5619 6649 -401 3 1269 286 328 34 24 chr15 89710925 89711131 -13783843 + L1MB5 LINE L1 2553 2760 -3380 3 1269 261 319 0 14 chr15 89711135 89711205 -13783769 - ID4_ SINE ID -14 69 1 3 1269 364 225 69 15 chr15 89711262 89711393 -13783581 + L1MB5 LINE L1 2802 2939 -3207 3 1269 782 314 52 61 chr15 89711674 89712017 -13782957 - MTE2a LTR MaLR 0 379 40 3 1269 183 42 0 0 chr15 89712071 89712095 -13782879 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 3 1269 693 299 112 45 chr15 89712171 89712499 -13782475 + L1MB5 LINE L1 3155 3521 -2625 3 1269 940 213 44 19 chr15 89712499 89712705 -13782269 + B3 SINE B2 1 211 -5 3 1269 693 299 112 45 chr15 89712705 89713320 -13781654 + L1MB5 LINE L1 3522 4162 -1984 3 1269 1876 163 50 12 chr15 89713328 89713670 -13781304 + ORR1D1 LTR MaLR 6 360 -14 3 1269 516 293 23 65 chr15 89713757 89714111 -13780863 + L1MB5 LINE L1 4259 4597 -1543 3 1269 210 290 0 0 chr15 89714121 89714190 -13780784 + CT-rich Low_complexity Low_complexity 4 72 0 3 1269 1675 249 26 19 chr15 89714201 89714618 -13780356 + Lx9 LINE L1 6492 6911 -733 3 1269 270 204 0 0 chr15 89714621 89714670 -13780304 - Lx7 LINE L1 -437 7259 7211 3 1269 539 298 58 40 chr15 89714711 89714783 -13780191 + L1MB5 LINE L1 4905 4978 -1168 3 1269 4764 91 42 23 chr15 89714783 89715517 -13779457 + RMER17A LTR ERVK 4 751 0 3 1269 1289 288 94 26 chr15 89715517 89716606 -13778368 + L1MB5 LINE L1 4979 6143 -31 3 1269 5395 144 36 18 chr15 89717002 89717943 -13777031 - RMER17B LTR ERVK 0 958 1 3 1269 369 348 65 54 chr15 89717948 89718227 -13776747 - LTR41 LTR ERVL -486 282 1 3 1269 3584 10 2 0 chr15 89719156 89719551 -13775423 - MTA_Mm LTR MaLR 0 396 1 3 1269 690 265 23 32 chr15 89719948 89720166 -13774808 + B3 SINE B2 1 216 0 3 1269 463 155 36 0 chr15 89720853 89720937 -13774037 - Lx3B LINE L1 -3 6970 6884 3 1269 432 258 83 45 chr15 89720975 89721108 -13773866 + ID_B1 SINE B4 82 223 -69 3 1269 557 27 27 0 chr15 89721662 89721736 -13773238 + (TCTA)n Simple_repeat Simple_repeat 4 79 0 3 1269 1823 171 45 42 chr15 89721844 89722198 -13772776 + ORR1B1 LTR MaLR 32 386 -8 3 1269 23 54 0 0 chr15 89724428 89724465 -13770509 + AT_rich Low_complexity Low_complexity 1 37 0 3 1269 22 0 0 0 chr15 89724749 89724771 -13770203 + AT_rich Low_complexity Low_complexity 1 22 0 3 1269 716 277 117 40 chr15 89725053 89725508 -13769466 + RMER5 LTR ERV1 45 534 0 3 1269 3692 153 81 8 chr15 89725645 89726309 -13768665 - RMER13B LTR ERVK -195 713 1 3 1269 8039 206 41 41 chr15 89726315 89726676 -13768298 - Lx7 LINE L1 -100 7596 7215 3 1269 201 39 0 0 chr15 89726676 89726702 -13768272 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 3 1269 8039 196 55 40 chr15 89726702 89729323 -13765651 - Lx7 LINE L1 -482 7214 4582 3 1269 1062 211 120 3 chr15 89729321 89729621 -13765353 + Lx7 LINE L1 4238 4572 -1308 3 1269 2171 194 37 11 chr15 89729617 89730155 -13764819 - Lx7 LINE L1 -2974 2906 2355 3 1269 2295 237 55 17 chr15 89730179 89730980 -13763994 - Lx7 LINE L1 -4451 1429 601 3 1269 24 0 0 0 chr15 89731062 89731086 -13763888 + AT_rich Low_complexity Low_complexity 1 24 0 3 1269 1313 260 40 6 chr15 89731248 89731563 -13763411 + ORR1D1 LTR MaLR 3 328 -46 3 1269 720 259 143 89 chr15 89731563 89731922 -13763052 + MT2A LTR ERVL 1 495 -89 3 1269 377 329 60 99 chr15 89732080 89732414 -13762560 + L2 LINE L2 2631 2951 -468 3 1269 648 38 0 0 chr15 89732631 89732710 -13762264 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 3 1269 1379 67 11 0 chr15 89732713 89732892 -13762082 - B2_Mm2 SINE B2 -14 181 1 3 1269 180 0 0 0 chr15 89733178 89733198 -13761776 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 1269 5117 199 47 37 chr15 89733968 89735839 -13759135 + L1_Mur3 LINE L1 17 1586 -4294 3 1269 8848 166 41 56 chr15 89735828 89737254 -13757720 + L1_Mur3 LINE L1 2011 3353 -2527 3 1269 405 0 0 0 chr15 89737254 89737299 -13757675 + (CTAA)n Simple_repeat Simple_repeat 3 47 0 3 1269 8848 166 41 56 chr15 89737299 89738105 -13756869 + L1_Mur3 LINE L1 3354 4208 -1672 3 1269 1779 168 45 40 chr15 89738107 89738199 -13756775 + L1_Mur3 LINE L1 4723 4816 -1064 3 1269 560 14 14 0 chr15 89738199 89738268 -13756706 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 3 1269 1779 168 45 40 chr15 89738268 89738578 -13756396 + L1_Mur3 LINE L1 4817 5127 -753 3 1269 442 292 123 62 chr15 89738578 89738936 -13756038 - L1MC LINE L1 -1939 4207 3828 3 1269 21 0 0 0 chr15 89739231 89739252 -13755722 + AT_rich Low_complexity Low_complexity 1 21 0 3 1269 263 71 24 0 chr15 89739293 89739335 -13755639 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1269 437 384 19 19 chr15 89741044 89741259 -13753715 + MTC LTR MaLR 1 215 -206 3 1269 531 231 128 7 chr15 89741259 89741407 -13753567 + Lx9 LINE L1 7253 7418 -226 3 1269 204 67 0 0 chr15 89741408 89741438 -13753536 + (TA)n Simple_repeat Simple_repeat 1 30 0 3 1269 4279 140 15 0 chr15 89741464 89742207 -13752767 - L1_Mur2 LINE L1 -265 5612 4859 3 1269 234 370 85 18 chr15 89742668 89742891 -13752083 - L4 LINE RTE -132 1897 1660 3 1269 917 216 14 42 chr15 89743099 89743312 -13751662 - B3 SINE B2 -6 210 4 3 1269 21 0 0 0 chr15 89743911 89743932 -13751042 + AT_rich Low_complexity Low_complexity 1 21 0 3 1269 222 128 0 0 chr15 89744120 89744159 -13750815 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 3 1269 238 269 36 60 chr15 89744406 89744489 -13750485 - ORR1E LTR MaLR -261 98 18 3 1269 335 308 148 21 chr15 89744569 89744758 -13750216 - MLT1E3 LTR MaLR -13 611 399 3 1269 296 324 58 31 chr15 89746959 89747220 -13747754 - L1MEf LINE L1 -2452 3694 3427 3 1269 384 255 181 29 chr15 89748010 89748220 -13746754 - L1M2 LINE L1 -3757 2386 2145 3 1269 4575 90 52 3 chr15 89748290 89748946 -13746028 - Lx2B LINE L1 0 7000 6313 3 1269 370 316 141 17 chr15 89749201 89749378 -13745596 - B3 SINE B2 -15 201 3 3 1269 432 332 99 12 chr15 89749382 89749635 -13745339 - L1MEf LINE L1 -4169 2073 1799 3 1269 378 91 0 0 chr15 89749679 89749734 -13745240 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1269 218 343 15 0 chr15 89749734 89749801 -13745173 - ID4 SINE ID -14 69 2 3 1269 21 0 0 0 chr15 89749968 89749989 -13744985 + AT_rich Low_complexity Low_complexity 1 21 0 3 1269 729 63 0 0 chr15 89750535 89750630 -13744344 + (TC)n Simple_repeat Simple_repeat 2 96 0 3 1269 232 319 0 77 chr15 89750845 89750923 -13744051 + ID4_ SINE ID 10 81 -2 3 1269 3249 38 2 5 chr15 89751115 89751512 -13743462 - MTA_Mm LTR MaLR 0 396 1 3 1269 28 0 0 0 chr15 89751603 89751631 -13743343 + AT_rich Low_complexity Low_complexity 1 28 0 3 1269 259 358 48 36 chr15 89751782 89751950 -13743024 - B4A SINE B4 -122 170 1 3 1269 311 308 51 7 chr15 89752922 89753116 -13741858 - L1M2 LINE L1 -314 5842 5633 3 1269 456 288 118 35 chr15 89753557 89753671 -13741303 - MTD LTR MaLR -177 242 114 3 1269 735 159 86 14 chr15 89753671 89753798 -13741176 + B1_Mur4 SINE Alu 1 139 -11 3 1269 342 0 0 0 chr15 89753798 89753836 -13741138 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3 1269 735 159 86 14 chr15 89753836 89753848 -13741126 + B1_Mur4 SINE Alu 140 150 0 3 1269 456 288 118 35 chr15 89753848 89753902 -13741072 - MTD LTR MaLR -306 113 60 3 1269 388 313 6 99 chr15 89754075 89754118 -13740856 + B4A SINE B4 3 36 -256 3 1269 1046 185 17 43 chr15 89754118 89754350 -13740624 - URR1A DNA MER1_type 0 226 1 3 1269 388 313 6 99 chr15 89754350 89754487 -13740487 + B4A SINE B4 37 166 -126 3 1269 713 249 113 26 chr15 89755222 89755453 -13739521 + MTD LTR MaLR 1 251 -168 3 1269 2556 188 57 16 chr15 89755455 89756090 -13738884 - RLTR31_Mm LTR ERVK -2 559 1 3 1269 573 217 81 11 chr15 89756137 89756297 -13738677 + MTD LTR MaLR 219 419 0 3 1269 287 388 0 16 chr15 89756667 89756790 -13738184 - LTR40b LTR ERVL -210 252 132 3 1269 240 307 106 73 chr15 89756788 89756939 -13738035 - LTR40a LTR ERVL -278 241 86 3 1269 608 306 42 40 chr15 89757876 89758281 -13736693 + L1_Mur3 LINE L1 4092 4497 -1383 3 1269 663 244 114 45 chr15 89758357 89758559 -13736415 + B3 SINE B2 1 216 0 3 1269 320 324 87 27 chr15 89758596 89759243 -13735731 + L1_Mur3 LINE L1 4786 5450 -430 3 1269 308 333 0 7 chr15 89759289 89759440 -13735534 + L1_Mur3 LINE L1 5483 5632 -668 3 1269 910 234 19 5 chr15 89759474 89759680 -13735294 - B3 SINE B2 -6 210 2 3 1269 225 0 0 0 chr15 89760053 89760078 -13734896 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 1269 385 335 72 67 chr15 89760193 89760612 -13734362 + L1M4c LINE L1 1252 1672 -4712 3 1269 1147 56 0 7 chr15 89760690 89760833 -13734141 - B1_Mus2 SINE Alu -2 145 4 3 1269 44 20 0 0 chr15 89760899 89760950 -13734024 + AT_rich Low_complexity Low_complexity 1 51 0 3 1269 581 174 6 18 chr15 89761076 89761240 -13733734 + (TA)n Simple_repeat Simple_repeat 2 163 0 3 1269 467 278 165 0 chr15 89761299 89761565 -13733409 - Lx9 LINE L1 -451 7193 6884 3 1269 478 244 1 3 chr15 89761579 89761709 -13733265 + L1M2 LINE L1 4771 4955 -1188 3 1269 1139 296 54 28 chr15 89761709 89762353 -13732621 + L1M4c LINE L1 3838 4498 -1878 3 1269 326 152 34 0 chr15 89762356 89762415 -13732559 + RLTR11A LTR ERVK 468 528 0 3 1269 330 26 0 0 chr15 89762585 89762624 -13732350 + (TTA)n Simple_repeat Simple_repeat 1 39 0 3 1269 186 267 117 0 chr15 89763869 89763929 -13731045 - L3 LINE CR1 -1329 3160 3094 3 1269 3705 176 27 4 chr15 89766776 89767451 -13727523 + Lx5 LINE L1 6360 7049 -1 3 1269 252 0 0 0 chr15 89767452 89767480 -13727494 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 3 1269 1393 28 0 0 chr15 89767824 89768000 -13726974 - L1_Mus1 LINE L1 -549 6018 5843 3 1269 3773 72 18 25 chr15 89768001 89768515 -13726459 + L1_Mus1 LINE L1 6057 6566 -1 3 1269 344 321 57 68 chr15 89769774 89769951 -13725023 - RMER5 LTR ERV1 -296 238 64 3 1269 1107 268 19 21 chr15 89771082 89771459 -13723515 - MTE2a LTR MaLR -3 376 1 3 1269 504 282 40 13 chr15 89771620 89771771 -13723203 - RSINE1 SINE B4 -8 157 3 3 1269 22 0 0 0 chr15 89772591 89772613 -13722361 + AT_rich Low_complexity Low_complexity 1 22 0 3 1269 365 194 60 0 chr15 89772973 89773040 -13721934 - ID2 SINE ID -11 72 2 3 1269 456 254 47 16 chr15 89773051 89773179 -13721795 - B1F1 SINE Alu 0 149 18 3 1269 362 303 31 39 chr15 89773179 89773226 -13721748 - ID_B1 SINE B4 -62 226 54 4 1269 3600 46 5 2 chr15 89773432 89773867 -13721107 + RLTR10C LTR ERVK 1 436 0 4 1269 41792 4 0 0 chr15 89773867 89781447 -13713527 + MMERVK10C-int LTR ERVK 1 7581 0 4 1269 3600 46 5 2 chr15 89781447 89781882 -13713092 + RLTR10C LTR ERVK 1 436 0 4 1269 3247 105 38 71 chr15 89781903 89781935 -13713039 - RLTR31B_Mm LTR ERVK 0 557 534 4 1269 920 108 58 0 chr15 89781935 89782074 -13712900 + B1_Mus1 SINE Alu 2 148 0 4 1269 3247 105 38 71 chr15 89782074 89782615 -13712359 - RLTR31B_Mm LTR ERVK -24 533 3 4 1269 188 34 0 33 chr15 89782737 89782767 -13712207 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1269 184 395 35 0 chr15 89782860 89782946 -13712028 + L2b LINE L2 3264 3352 -23 4 158 805 195 43 14 chr15 89784155 89784363 -13710611 + Lx2B LINE L1 6783 6996 -4 4 1270 450 0 0 0 chr15 89784395 89784445 -13710529 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 1270 1605 219 21 11 chr15 89784734 89785107 -13709867 - RMER5 LTR ERV1 -7 527 151 4 1270 774 194 22 0 chr15 89785464 89785603 -13709371 - RMER5 LTR ERV1 -376 158 17 4 1270 387 0 0 0 chr15 89786179 89786222 -13708752 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1270 349 172 31 0 chr15 89786350 89786414 -13708560 - RMER5 LTR ERV1 -61 473 408 4 1270 876 171 75 35 chr15 89787008 89787208 -13707766 + RMER5 LTR ERV1 316 523 -11 4 1270 327 113 0 0 chr15 89787225 89787287 -13707687 + (T)n Simple_repeat Simple_repeat 1 62 0 4 1270 17836 35 3 12 chr15 89788225 89791454 -13703520 + L1Md_A LINE L1 244 3440 -2443 4 1270 1864 134 254 31 chr15 89791454 89791902 -13703072 - RLTR6_Mm LTR ERV1 -70 584 37 4 1270 17815 17 0 1 chr15 89792043 89794194 -13700780 + L1Md_A LINE L1 3437 5586 -297 4 1270 8359 37 0 0 chr15 89794194 89795188 -13699786 + L1Md_A LINE L1 5587 6580 -2 4 1270 1894 171 25 98 chr15 89795724 89795885 -13699089 - RLTR14 LTR ERV1 -2 380 234 4 1270 333 0 0 0 chr15 89795885 89795922 -13699052 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 1270 1894 171 25 98 chr15 89795922 89796168 -13698806 - RLTR14 LTR ERV1 -149 233 3 4 1270 1353 209 90 22 chr15 89796338 89796451 -13698523 - Lx9 LINE L1 -7 7637 7505 4 1270 360 0 0 0 chr15 89796451 89796491 -13698483 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1270 1353 209 90 22 chr15 89796491 89796823 -13698151 - Lx9 LINE L1 -140 7504 7162 4 1270 301 191 62 50 chr15 89796876 89796985 -13697989 + L1M2 LINE L1 5158 5262 -878 4 1270 1268 300 54 89 chr15 89797193 89797965 -13697009 + Lx8 LINE L1 6169 6913 -560 4 1270 3272 193 68 12 chr15 89798019 89798270 -13696704 - Lx7 LINE L1 -618 7078 6800 4 1270 1993 129 0 66 chr15 89798270 89798619 -13696355 + ORR1A3 LTR MaLR 1 326 0 4 1270 3272 193 68 12 chr15 89798619 89799044 -13695930 - Lx7 LINE L1 -897 6799 6364 4 1270 1626 199 274 16 chr15 89799149 89799573 -13695401 - MT2A LTR ERVL 0 533 1 4 1270 544 283 60 112 chr15 89800095 89800310 -13694664 + B4 SINE B4 20 223 -69 4 1270 222 143 0 0 chr15 89800310 89800359 -13694615 + (CAAA)n Simple_repeat Simple_repeat 4 52 0 4 1270 1006 153 117 15 chr15 89801422 89801627 -13693347 - URR1A DNA MER1_type 0 226 1 4 1270 324 296 30 26 chr15 89802174 89802265 -13692709 - PB1D10 SINE Alu -26 101 3 4 1270 232 220 39 20 chr15 89802344 89802395 -13692579 - RSINE1 SINE B4 -71 94 43 4 1270 1991 291 62 21 chr15 89802538 89803340 -13691634 + Lx8 LINE L1 6279 7113 -360 4 1270 1127 79 17 6 chr15 89803471 89803649 -13691325 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 4 1270 434 49 16 0 chr15 89803787 89803848 -13691126 + (GA)n Simple_repeat Simple_repeat 2 63 0 4 1270 202 278 44 0 chr15 89804131 89804221 -13690753 + (TATAG)n Simple_repeat Simple_repeat 2 95 0 4 1270 230 392 102 0 chr15 89804250 89804416 -13690558 + MIRb SINE MIR 69 251 -17 4 1270 1239 7 14 31 chr15 89804734 89805021 -13689953 + (TG)n Simple_repeat Simple_repeat 1 281 0 4 1270 2828 87 45 14 chr15 89805455 89805898 -13689076 - Lx2A1 LINE L1 0 7008 6552 4 1270 232 290 0 16 chr15 89806187 89806250 -13688724 + C-rich Low_complexity Low_complexity 6 67 0 4 1270 355 276 154 43 chr15 89806925 89807250 -13687724 - L1MEg LINE L1 -5108 976 616 4 1270 2267 139 24 54 chr15 89807411 89807836 -13687138 - Lx3B LINE L1 -2 6971 6560 4 1270 582 229 125 0 chr15 89807925 89808069 -13686905 - B3A SINE B2 -35 163 2 4 1270 18056 60 155 58 chr15 89809140 89812226 -13682748 + L1Md_F2 LINE L1 2200 5585 -298 4 1270 8241 42 0 0 chr15 89812227 89813216 -13681758 + L1Md_F2 LINE L1 5587 6575 -7 4 1270 348 24 0 0 chr15 89814584 89814625 -13680349 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1270 224 214 0 0 chr15 89815394 89815450 -13679524 + (CAA)n Simple_repeat Simple_repeat 2 57 0 4 1270 631 178 59 8 chr15 89815638 89815757 -13679217 + B1_Mur4 SINE Alu 1 125 -25 4 1270 335 324 21 7 chr15 89815757 89815778 -13679196 + ID_B1 SINE B4 82 223 -1 4 1270 596 291 80 4 chr15 89815925 89816201 -13678773 + Lx9 LINE L1 7221 7517 -127 4 1270 655 121 41 35 chr15 89816201 89816373 -13678601 + (TATATG)n Simple_repeat Simple_repeat 6 178 0 4 1270 264 220 44 22 chr15 89816391 89816526 -13678448 + Lx9 LINE L1 7480 7617 -27 4 1270 700 273 114 4 chr15 89816795 89817067 -13677907 + Lx8 LINE L1 7167 7468 -5 4 1270 357 24 0 0 chr15 89817881 89817923 -13677051 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1270 332 287 104 3 chr15 89817964 89818244 -13676730 - L1_Rod LINE L1 -4449 1398 1094 4 1270 2075 303 90 29 chr15 89818243 89818718 -13676256 + Lx8 LINE L1 6363 6882 -591 4 1270 2442 89 6 0 chr15 89818718 89819043 -13675931 + ORR1A2 LTR MaLR 1 327 0 4 1270 2075 303 90 29 chr15 89819043 89819400 -13675574 + Lx8 LINE L1 6883 7246 -227 4 1270 497 313 26 26 chr15 89819407 89819558 -13675416 + B3A SINE B2 1 151 -47 4 1270 303 104 0 0 chr15 89819560 89819608 -13675366 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1270 599 294 19 6 chr15 89819677 89819838 -13675136 - RSINE1 SINE B4 0 165 3 4 1270 3051 160 218 76 chr15 89819875 89820654 -13674320 + RMER19B LTR ERVK 1 890 -12 4 1270 219 36 0 0 chr15 89821018 89821046 -13673928 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 4 1270 5947 60 10 30 chr15 89821127 89821947 -13673027 - RLTR13B4 LTR ERVK 0 803 1 4 1270 279 0 0 0 chr15 89822677 89822708 -13672266 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1270 942 262 127 6 chr15 89822871 89823121 -13671853 + RLTR40 LTR ERVK 4 290 -527 4 1270 261 0 0 0 chr15 89823121 89823150 -13671824 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1270 468 91 0 0 chr15 89823151 89823217 -13671757 + (TA)n Simple_repeat Simple_repeat 1 66 0 4 1270 270 0 0 0 chr15 89823221 89823251 -13671723 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1270 942 262 127 6 chr15 89823251 89823331 -13671643 + RLTR40 LTR ERVK 291 375 -442 4 1270 1732 325 61 21 chr15 89823333 89824368 -13670606 + MERVL_2A-int LTR ERVL 147 1286 -4475 4 1270 351 0 0 0 chr15 89824439 89824478 -13670496 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 1270 594 39 0 0 chr15 89824581 89824658 -13670316 + (TG)n Simple_repeat Simple_repeat 1 77 0 4 1270 216 0 0 0 chr15 89824658 89824682 -13670292 + (CTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1270 416 300 137 26 chr15 89825045 89825315 -13669659 + MERVL_2A-int LTR ERVL 1221 1520 -4194 4 1270 522 395 19 30 chr15 89825387 89825859 -13669115 + MT2A LTR ERVL 2 468 -65 4 1270 625 242 33 0 chr15 89825873 89826026 -13668948 + MERVL_2A-int LTR ERVL 3004 3161 -2553 4 1270 690 251 88 33 chr15 89826055 89826327 -13668647 + MERVL_2A-int LTR ERVL 5202 5488 -273 4 1270 2979 22 0 118 chr15 89826388 89826802 -13668172 - RLTR10B2 LTR ERVK 0 365 1 4 1270 317 299 184 71 chr15 89827656 89828103 -13666871 + MT2A LTR ERVL 2 508 -25 4 1270 2082 169 37 3 chr15 89828103 89828458 -13666516 - ORR1B2 LTR MaLR 0 367 1 4 1270 317 299 184 71 chr15 89828458 89828488 -13666486 + MT2A LTR ERVL 509 533 0 4 1270 333 0 0 0 chr15 89828710 89828747 -13666227 + (TC)n Simple_repeat Simple_repeat 2 38 0 4 1270 541 149 29 6 chr15 89828744 89828919 -13666055 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 4 1270 1305 69 0 0 chr15 89828944 89829117 -13665857 + (TTTC)n Simple_repeat Simple_repeat 3 175 0 4 1270 468 318 45 26 chr15 89829117 89829272 -13665702 - RSINE1 SINE B4 -5 160 3 4 1270 955 231 21 21 chr15 89829295 89829538 -13665436 - Lx9 LINE L1 -1061 6583 6341 4 1270 326 159 0 14 chr15 89829554 89829624 -13665350 + CT-rich Low_complexity Low_complexity 1 69 0 4 1270 563 213 23 34 chr15 89829909 89830084 -13664890 - Lx9 LINE L1 -397 5450 5278 4 1270 1190 245 103 17 chr15 89830356 89830775 -13664199 - Lx9 LINE L1 -1786 4061 3607 4 1270 210 37 0 0 chr15 89830780 89830807 -13664167 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 4 1270 22 0 0 0 chr15 89830979 89831001 -13663973 + AT_rich Low_complexity Low_complexity 1 22 0 4 1270 22 0 0 0 chr15 89831324 89831346 -13663628 + AT_rich Low_complexity Low_complexity 1 22 0 4 1270 1642 198 63 15 chr15 89831544 89831866 -13663108 + MTD LTR MaLR 26 363 -56 4 1270 608 203 200 13 chr15 89831866 89832016 -13662958 + ORR1C1 LTR MaLR 1 178 -200 4 1270 675 126 0 45 chr15 89832511 89832644 -13662330 - Lx2B LINE L1 -3 6997 6871 4 1270 402 348 98 0 chr15 89833240 89833404 -13661570 + Lx9 LINE L1 6435 6614 -1030 4 1270 353 359 45 11 chr15 89833404 89833587 -13661387 - L1M5 LINE L1 -497 5665 5474 4 1270 341 226 11 45 chr15 89833707 89833795 -13661179 - Lx8 LINE L1 -473 7000 6916 4 1270 227 287 58 14 chr15 89833802 89833940 -13661034 - L1M5 LINE L1 -342 5837 5694 4 1270 585 0 0 0 chr15 89834180 89834245 -13660729 + (TTC)n Simple_repeat Simple_repeat 3 67 0 4 1270 924 62 130 8 chr15 89834497 89834628 -13660346 + B1_Mus1 SINE Alu 2 148 0 4 1270 228 135 0 0 chr15 89834630 89834667 -13660307 + (A)n Simple_repeat Simple_repeat 1 37 0 4 1270 2441 185 112 21 chr15 89834667 89834695 -13660279 - RLTR40 LTR ERVK -133 684 659 4 1270 2985 83 0 10 chr15 89834695 89835095 -13659879 - MTA_Mm LTR MaLR 0 396 1 4 1270 2441 185 112 21 chr15 89835095 89835690 -13659284 - RLTR40 LTR ERVK -159 658 4 4 1270 24 32 0 0 chr15 89835837 89835868 -13659106 + AT_rich Low_complexity Low_complexity 1 31 0 4 1270 23 54 0 0 chr15 89836279 89836316 -13658658 + AT_rich Low_complexity Low_complexity 1 37 0 4 1270 31 0 0 0 chr15 89836589 89836620 -13658354 + AT_rich Low_complexity Low_complexity 1 31 0 4 1270 328 319 0 8 chr15 89838068 89838185 -13656789 + (CA)n Simple_repeat Simple_repeat 2 117 0 4 1270 351 47 0 0 chr15 89838185 89838228 -13656746 + HAL1-3A_ME LINE L1 1976 2018 -840 4 1270 1183 223 119 15 chr15 89838469 89838806 -13656168 - ORR1D1 LTR MaLR -2 372 1 5 1270 4550 228 92 41 chr15 89838806 89838961 -13656013 - ORR1D1-int LTR MaLR 0 1370 1213 5 1270 192 40 0 0 chr15 89838961 89838986 -13655988 + (CCCCCA)n Simple_repeat Simple_repeat 1 25 0 5 1270 4550 228 92 41 chr15 89838986 89840133 -13654841 - ORR1D1-int LTR MaLR -158 1212 4 5 1270 1435 189 152 0 chr15 89840133 89840455 -13654519 - ORR1D1 LTR MaLR -2 372 2 5 1270 21 57 0 0 chr15 89840772 89840807 -13654167 + AT_rich Low_complexity Low_complexity 1 35 0 5 1270 1340 32 24 0 chr15 89841547 89842051 -13652923 + (TCTA)n Simple_repeat Simple_repeat 1 516 0 5 1270 678 294 90 80 chr15 89842480 89842857 -13652117 - MLT1B LTR MaLR 0 390 10 5 1270 1000 119 0 12 chr15 89843125 89843295 -13651679 + (TTCC)n Simple_repeat Simple_repeat 4 171 0 5 1270 681 123 0 0 chr15 89843295 89843401 -13651573 + (TCC)n Simple_repeat Simple_repeat 2 107 0 5 1270 492 18 0 0 chr15 89843399 89843456 -13651518 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 1270 776 170 35 14 chr15 89843457 89843600 -13651374 - B1_Mus1 SINE Alu -2 146 1 5 1270 24 0 0 0 chr15 89844578 89844602 -13650372 + AT_rich Low_complexity Low_complexity 1 24 0 5 1270 397 235 47 0 chr15 89844624 89844709 -13650265 + PB1D10 SINE Alu 26 114 -3 5 1270 540 81 0 0 chr15 89844841 89844915 -13650059 + (TTCC)n Simple_repeat Simple_repeat 4 77 0 5 1270 276 185 0 0 chr15 89844905 89844959 -13650015 + CT-rich Low_complexity Low_complexity 114 167 0 5 1270 1113 147 17 0 chr15 89844966 89845143 -13649831 - B2_Mm2 SINE B2 -14 181 2 5 1270 3083 68 18 2 chr15 89845330 89845731 -13649243 + MTB_Mm LTR MaLR 1 407 0 5 1270 24 32 0 0 chr15 89846576 89846607 -13648367 + AT_rich Low_complexity Low_complexity 1 31 0 5 1270 1097 100 0 22 chr15 89846667 89846851 -13648123 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1270 313 286 179 76 chr15 89848017 89848264 -13646710 + MLT1E1A LTR MaLR 312 589 -65 5 1270 540 0 0 0 chr15 89848264 89848324 -13646650 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 1270 292 286 179 76 chr15 89848324 89848367 -13646607 + MLT1E1A LTR MaLR 590 651 -3 5 1270 1223 147 31 0 chr15 89848807 89848998 -13645976 + ORR1C1 LTR MaLR 182 378 0 5 1270 264 260 23 45 chr15 89849035 89849173 -13645801 + L1MA5 LINE L1 5798 5932 -368 5 1270 513 47 0 0 chr15 89849173 89849237 -13645737 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 5 1270 249 275 70 70 chr15 89849237 89849313 -13645661 + L1MA5 LINE L1 5933 6012 -288 5 1270 292 355 16 32 chr15 89849320 89849445 -13645529 - MTEa-int LTR MaLR -1181 399 277 5 1270 592 338 25 0 chr15 89849462 89849663 -13645311 - MTEa-int LTR MaLR -1374 206 1 5 1270 428 201 7 28 chr15 89849670 89849813 -13645161 + CT-rich Low_complexity Low_complexity 3 142 0 5 1270 539 285 102 28 chr15 89849813 89849990 -13644984 - MTEa LTR MaLR -8 371 182 5 1270 635 292 22 6 chr15 89850680 89850859 -13644115 - MTEa LTR MaLR -197 182 1 5 1270 2323 144 48 36 chr15 89850904 89851344 -13643630 - Lx2B LINE L1 0 7000 6556 5 1270 614 158 0 11 chr15 89851349 89851528 -13643446 + (TATATG)n Simple_repeat Simple_repeat 4 180 0 5 1270 817 177 0 0 chr15 89851571 89851718 -13643256 - Lx2B LINE L1 -429 6568 6422 5 1270 1042 186 33 0 chr15 89851717 89851959 -13643015 + Lx2 LINE L1 5946 6195 -802 5 1270 598 113 19 0 chr15 89851971 89852077 -13642897 + Lx2 LINE L1 6327 6434 -566 5 1270 186 43 0 0 chr15 89852707 89852730 -13642244 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 1270 21 36 0 0 chr15 89853218 89853246 -13641728 + AT_rich Low_complexity Low_complexity 1 28 0 5 1270 23 0 0 0 chr15 89853455 89853478 -13641496 + AT_rich Low_complexity Low_complexity 1 23 0 5 1270 474 327 60 70 chr15 89853586 89854000 -13640974 - BLACKJACK DNA AcHobo -1742 1202 793 5 1270 5431 70 10 3 chr15 89854090 89854863 -13640111 - Lx3_Mus LINE L1 -916 4970 4192 5 1270 6388 70 24 1 chr15 89854859 89855795 -13639179 + Lx3_Mus LINE L1 4987 5937 -1072 5 1270 6223 75 34 12 chr15 89855799 89856709 -13638265 + Lx3_Mus LINE L1 6080 7009 0 5 1270 229 283 17 0 chr15 89857055 89857115 -13637859 + MER21B LTR ERV1 682 742 -121 5 1270 558 47 35 0 chr15 89857283 89857369 -13637605 + (TAGA)n Simple_repeat Simple_repeat 3 91 0 5 1270 2080 127 6 60 chr15 89857373 89857708 -13637266 - ORR1A3 LTR MaLR -8 318 2 5 1270 551 40 14 0 chr15 89857708 89857782 -13637192 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 5 1270 356 265 62 33 chr15 89858237 89858448 -13636526 - L1MC LINE L1 -3693 2453 2237 5 1270 233 282 94 8 chr15 89858455 89858653 -13636321 + L1PB4 LINE L1 5773 5994 -162 5 1270 22 0 0 0 chr15 89859487 89859509 -13635465 + AT_rich Low_complexity Low_complexity 1 22 0 5 1270 339 25 0 0 chr15 89860324 89860364 -13634610 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1270 523 317 38 103 chr15 89860546 89860943 -13634031 + MTEa LTR MaLR 5 375 -4 5 1270 473 267 38 36 chr15 89860943 89861110 -13633864 + B3 SINE B2 29 210 -6 5 1270 315 49 0 0 chr15 89861686 89861727 -13633247 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1270 518 349 33 16 chr15 89861796 89862038 -13632936 - B4A SINE B4 -46 246 1 5 1270 182 91 0 29 chr15 89862972 89863006 -13631968 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 5 1270 542 257 0 62 chr15 89863580 89863725 -13631249 + ID_B1 SINE B4 83 218 -6 5 1270 291 114 0 0 chr15 89863765 89863809 -13631165 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 1270 459 0 0 0 chr15 89864305 89864356 -13630618 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1270 837 83 21 0 chr15 89864356 89864500 -13630474 + (GA)n Simple_repeat Simple_repeat 1 148 0 5 1270 632 191 66 7 chr15 89864717 89864854 -13630120 - MTD LTR MaLR 0 419 275 5 1270 1711 247 39 93 chr15 89864854 89865412 -13629562 - MTC-int LTR MaLR -730 528 1 5 1270 1247 215 94 33 chr15 89865414 89865809 -13629165 + MTD LTR MaLR 1 419 0 5 1270 22 0 0 30 chr15 89865843 89865854 -13629120 + AT_rich Low_complexity Low_complexity 1 11 0 5 1270 189 0 0 0 chr15 89865854 89865875 -13629099 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 5 1270 22 0 0 30 chr15 89865875 89865896 -13629078 + AT_rich Low_complexity Low_complexity 1 21 0 5 1270 447 68 0 0 chr15 89869439 89869498 -13625476 + (TG)n Simple_repeat Simple_repeat 1 59 0 5 1270 1213 168 5 33 chr15 89869499 89869714 -13625260 + URR1B DNA MER1_type 8 216 -9 5 1270 555 224 65 85 chr15 89869892 89870092 -13624882 - B3 SINE B2 -19 197 2 5 1270 248 315 110 17 chr15 89870154 89870445 -13624529 - L1M2 LINE L1 -2006 4836 4519 5 1270 294 291 19 19 chr15 89870658 89870812 -13624162 - L1M2 LINE L1 -4304 2545 2392 5 1270 420 20 0 0 chr15 89871096 89871145 -13623829 + (CAAG)n Simple_repeat Simple_repeat 2 50 0 5 1270 276 360 65 0 chr15 89872066 89872219 -13622755 + MLT2B3 LTR ERVL 4 166 -388 5 1270 262 340 49 141 chr15 89872219 89872251 -13622723 + MTEa LTR MaLR 4 171 -208 5 1270 21 0 0 0 chr15 89872386 89872407 -13622567 + AT_rich Low_complexity Low_complexity 1 21 0 5 1270 288 0 0 0 chr15 89872624 89872656 -13622318 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 1270 452 286 145 16 chr15 89872830 89873079 -13621895 - RMER20B LTR ERVK -216 411 131 5 1270 27 0 0 0 chr15 89875253 89875280 -13619694 + AT_rich Low_complexity Low_complexity 1 27 0 5 1270 237 33 0 0 chr15 89876730 89876760 -13618214 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 5 1270 374 215 12 5 chr15 89876864 89876984 -13617990 + ORR1D2 LTR MaLR 19 238 -132 5 1270 1949 192 8 26 chr15 89877013 89877322 -13617652 + ORR1B1 LTR MaLR 10 312 -82 5 1270 3413 30 8 0 chr15 89877322 89877715 -13617259 - MTA_Mm LTR MaLR 0 396 1 5 1270 1949 192 8 26 chr15 89877715 89877789 -13617185 + ORR1B1 LTR MaLR 313 386 -8 5 1270 22 35 0 0 chr15 89877949 89877978 -13616996 + AT_rich Low_complexity Low_complexity 1 29 0 5 1270 234 250 21 42 chr15 89878398 89878494 -13616480 + (TG)n Simple_repeat Simple_repeat 2 95 0 5 1270 380 20 0 20 chr15 89878496 89878546 -13616428 + (TATG)n Simple_repeat Simple_repeat 4 52 0 5 1270 206 176 23 23 chr15 89878567 89878654 -13616320 + (TG)n Simple_repeat Simple_repeat 2 88 0 5 1270 420 111 0 0 chr15 89878725 89878788 -13616186 + (GGA)n Simple_repeat Simple_repeat 3 65 0 5 1270 977 186 46 73 chr15 89879161 89879422 -13615552 - RMER5 LTR ERV1 -278 256 3 5 1270 3208 93 0 11 chr15 89879598 89880052 -13614922 - L1Md_F2 LINE L1 -3 6579 6131 5 1270 1799 58 0 4 chr15 89880052 89880292 -13614682 - L1Md_F2 LINE L1 -563 6019 5781 5 1270 11582 46 5 2 chr15 89880285 89882505 -13612469 - L1Md_F3 LINE L1 -4 6580 4352 5 1270 15614 65 20 8 chr15 89882505 89884218 -13610756 - L1Md_F2 LINE L1 -86 5797 4065 5 1270 1161 75 0 0 chr15 89884218 89884365 -13610609 + B1_Mus2 SINE Alu 1 147 0 5 1270 15614 65 20 8 chr15 89884365 89884839 -13610135 - L1Md_F2 LINE L1 -1819 4064 3585 5 1270 840 84 0 0 chr15 89884839 89884946 -13610028 - U6 snRNA snRNA 0 107 1 5 1270 1121 176 26 75 chr15 89885339 89885604 -13609370 + RMER5 LTR ERV1 267 518 -16 5 1270 1162 232 56 44 chr15 89885985 89886327 -13608647 - Lx6 LINE L1 -2 7458 7113 5 1270 486 0 0 0 chr15 89887835 89887889 -13607085 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1270 1272 254 55 17 chr15 89888144 89888548 -13606426 - MTD LTR MaLR 0 419 1 5 1270 767 287 26 100 chr15 89888681 89888908 -13606066 - L1_Rod LINE L1 -1468 4412 4197 5 1270 494 146 0 37 chr15 89888908 89889015 -13605959 + Lx LINE L1 6548 6650 -4 5 1270 906 259 37 69 chr15 89889015 89889446 -13605528 - L1_Rod LINE L1 -1684 4196 3805 5 1270 426 20 0 0 chr15 89889511 89889562 -13605412 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1270 949 230 24 5 chr15 89889565 89889775 -13605199 + B3 SINE B2 3 216 0 5 1270 1153 235 108 57 chr15 89892116 89892295 -13602679 - RMER4B LTR ERVK -9 457 269 5 1270 369 93 0 0 chr15 89892295 89892349 -13602625 + (CAG)n Simple_repeat Simple_repeat 1 54 0 5 1270 1189 140 81 10 chr15 89892349 89892593 -13602381 - RMER4B LTR ERVK -198 268 12 5 1270 344 280 151 8 chr15 89892802 89892921 -13602053 + B1F SINE Alu 5 140 -9 5 1270 2496 136 30 2 chr15 89893101 89893528 -13601446 - L1_Mur3 LINE L1 -1541 4339 3901 5 1270 207 182 0 0 chr15 89894281 89894314 -13600660 + (TATG)n Simple_repeat Simple_repeat 3 35 0 5 1270 587 259 109 70 chr15 89895258 89895690 -13599284 - RMER20B LTR ERVK -23 604 96 5 1270 306 0 0 0 chr15 89896157 89896191 -13598783 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1270 280 187 12 85 chr15 89896850 89896932 -13598042 - PB1D10 SINE Alu -4 113 38 5 1270 243 0 0 0 chr15 89897105 89897132 -13597842 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1270 522 0 0 0 chr15 89897132 89897189 -13597785 + (GA)n Simple_repeat Simple_repeat 2 59 0 5 1270 1579 133 189 13 chr15 89898292 89898604 -13596370 - ORR1B2 LTR MaLR 0 367 1 5 1270 207 0 0 0 chr15 89899376 89899399 -13595575 + (AGCTG)n Simple_repeat Simple_repeat 2 24 0 5 1270 238 214 22 77 chr15 89899719 89899810 -13595164 + L1M5 LINE L1 5628 5713 -466 6 1270 279 276 58 102 chr15 89899936 89900142 -13594832 + Lx8 LINE L1 6665 6861 -612 6 1270 2627 143 14 7 chr15 89900173 89900587 -13594387 - MTC LTR MaLR 0 421 5 6 1270 284 396 0 12 chr15 89900601 89900767 -13594207 + Lx8 LINE L1 7033 7196 -277 6 1270 589 175 30 0 chr15 89902028 89902194 -13592780 + (CA)n Simple_repeat Simple_repeat 1 171 0 6 1270 641 177 17 11 chr15 89902243 89902420 -13592554 + (CA)n Simple_repeat Simple_repeat 2 179 0 6 1270 22 56 0 0 chr15 89902916 89902952 -13592022 + AT_rich Low_complexity Low_complexity 1 36 0 6 1270 1890 117 31 0 chr15 89903042 89903332 -13591642 - ORR1B1 LTR MaLR -95 299 1 6 1270 243 0 0 0 chr15 89904278 89904305 -13590669 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1270 717 171 0 8 chr15 89904567 89904685 -13590289 + B1_Mus1 SINE Alu 1 117 -31 6 1270 210 37 0 0 chr15 89905706 89905733 -13589241 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1270 328 16 15 62 chr15 89905821 89905886 -13589088 + (GTGTG)n Simple_repeat Simple_repeat 5 66 0 6 1270 539 307 34 8 chr15 89906276 89906542 -13588432 - L1_Mur3 LINE L1 -1691 4189 3917 6 1270 1111 181 118 54 chr15 89906538 89906676 -13588298 - Lx7 LINE L1 0 7696 7563 6 1270 375 23 0 0 chr15 89906676 89906720 -13588254 + (CAGA)n Simple_repeat Simple_repeat 4 47 0 6 1270 1111 186 121 53 chr15 89906720 89906930 -13588044 - Lx7 LINE L1 -134 7562 7369 6 1270 298 132 66 226 chr15 89906927 89907064 -13587910 - L1_Mur3 LINE L1 -1133 4747 4633 6 1270 639 301 46 0 chr15 89907190 89907343 -13587631 + RSINE1 SINE B4 2 161 -4 6 1270 204 40 0 0 chr15 89907346 89907371 -13587603 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1270 310 331 56 16 chr15 89907419 89907545 -13587429 - L1MC1 LINE L1 -1 6332 6202 6 1270 2481 211 40 31 chr15 89907549 89908271 -13586703 + RMER1B Other Other 140 1057 -9 6 1270 498 125 0 0 chr15 89908749 89908829 -13586145 + (TC)n Simple_repeat Simple_repeat 2 81 0 6 1270 557 246 57 0 chr15 89908864 89908986 -13585988 - B1_Mur2 SINE Alu -20 129 1 6 1270 25 0 0 0 chr15 89909075 89909100 -13585874 + AT_rich Low_complexity Low_complexity 1 25 0 6 1270 3188 63 2 2 chr15 89909116 89909516 -13585458 + MTB LTR MaLR 1 400 0 6 1270 342 215 120 109 chr15 89909520 89909703 -13585271 + L1MA5 LINE L1 5731 5915 -385 6 1270 644 287 52 0 chr15 89909883 89910057 -13584917 + B3A SINE B2 1 183 -15 6 1270 329 62 21 0 chr15 89910175 89910223 -13584751 + (TA)n Simple_repeat Simple_repeat 2 50 0 6 1270 1607 37 0 0 chr15 89910479 89910668 -13584306 - B2_Mm1t SINE B2 -3 190 2 6 1270 283 235 22 56 chr15 89910947 89911037 -13583937 + MER44D DNA MER2_type 32 118 -587 6 1270 279 54 0 0 chr15 89911080 89911117 -13583857 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 1270 1079 214 28 5 chr15 89911121 89911332 -13583642 - B3 SINE B2 0 216 1 6 1270 453 377 68 48 chr15 89911672 89912146 -13582828 + LTR40a LTR ERVL 37 519 0 6 1270 324 0 0 0 chr15 89912529 89912565 -13582409 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1270 204 40 0 0 chr15 89912847 89912872 -13582102 + (TC)n Simple_repeat Simple_repeat 1 25 0 6 1270 723 234 0 27 chr15 89913582 89913731 -13581243 + B1_Mur1 SINE Alu 3 147 -2 6 1270 548 95 12 0 chr15 89913869 89913953 -13581021 + (GAAA)n Simple_repeat Simple_repeat 4 88 0 6 1270 406 288 75 42 chr15 89915068 89915189 -13579785 + L1M3c LINE L1 1048 1161 -4980 6 158 2139 62 195 7 chr15 89915189 89915496 -13579478 + RLTR10B2 LTR ERVK 1 365 0 6 1271 406 288 75 42 chr15 89915496 89915758 -13579216 + L1M3c LINE L1 1162 1444 -4697 6 1271 308 339 16 76 chr15 89915865 89916050 -13578924 + L1M4c LINE L1 1334 1507 -4877 6 1271 4722 228 62 50 chr15 89916067 89916525 -13578449 - L1_Rod LINE L1 -664 5183 4722 6 1271 188 34 0 33 chr15 89916525 89916555 -13578419 + (TA)n Simple_repeat Simple_repeat 1 29 0 6 1271 4722 228 62 50 chr15 89916555 89917766 -13577208 - L1_Rod LINE L1 -1126 4721 3494 6 1271 852 184 67 25 chr15 89918185 89918425 -13576549 - Lx7 LINE L1 -2 7694 7445 6 1271 339 191 0 0 chr15 89918444 89918512 -13576462 + (CA)n Simple_repeat Simple_repeat 1 68 0 6 1271 238 232 18 0 chr15 89918515 89918571 -13576403 - Lx7 LINE L1 -400 7296 7240 6 1271 4317 145 63 7 chr15 89918564 89919420 -13575554 + L1_Mur3 LINE L1 3724 4627 -1253 6 1271 996 106 0 0 chr15 89919458 89919637 -13575337 + (TG)n Simple_repeat Simple_repeat 2 180 0 6 1271 1092 94 0 0 chr15 89919654 89920149 -13574825 + (TG)n Simple_repeat Simple_repeat 1 495 0 6 1271 234 91 0 0 chr15 89920366 89920399 -13574575 + (TAA)n Simple_repeat Simple_repeat 1 33 0 6 1271 399 269 34 23 chr15 89920409 89920427 -13574547 - L1MB8 LINE L1 -157 6021 6004 6 1271 234 0 0 0 chr15 89920427 89920453 -13574521 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 6 1271 399 269 34 23 chr15 89920453 89920609 -13574365 - L1MB8 LINE L1 -175 6003 5845 6 1271 2410 204 56 5 chr15 89920670 89921227 -13573747 - Lx7 LINE L1 -442 7254 6670 6 1271 285 182 0 0 chr15 89921259 89921314 -13573660 - L1_Rod LINE L1 -4257 1590 1536 6 1271 287 239 227 0 chr15 89921303 89921391 -13573583 - Lx7 LINE L1 -1016 6680 6573 6 1271 2870 197 14 21 chr15 89921412 89922568 -13572406 - L1_Rod LINE L1 -3863 1984 833 6 1271 272 27 27 0 chr15 89923133 89923170 -13571804 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 1271 2991 41 2 97 chr15 89923995 89924426 -13570548 - RLTR10 LTR ERVK 0 390 1 6 1271 210 71 0 0 chr15 89925862 89925890 -13569084 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 6 1271 937 144 45 23 chr15 89926015 89926192 -13568782 + B2_Mm2 SINE B2 1 181 -14 6 1271 742 282 101 45 chr15 89926550 89926996 -13567978 + Lx8 LINE L1 6906 7376 -97 6 1271 481 297 154 11 chr15 89927099 89927355 -13567619 - MLT2B4 LTR ERVL -124 290 1 6 1271 411 21 0 0 chr15 89927673 89927721 -13567253 + (CAAG)n Simple_repeat Simple_repeat 2 49 0 6 1271 274 371 56 17 chr15 89927740 89927918 -13567056 + MLT1G3 LTR MaLR 288 472 -123 6 1271 239 250 129 45 chr15 89927937 89928026 -13566948 + RMER17C LTR ERVK 140 242 -168 6 1271 849 161 0 63 chr15 89928026 89928185 -13566789 - B1_Mur4 SINE Alu 0 150 2 6 1271 239 250 129 45 chr15 89928185 89928250 -13566724 + RMER17C LTR ERVK 243 307 -103 6 1271 253 253 66 44 chr15 89928763 89928854 -13566120 + MLT1J1 LTR MaLR 69 161 -283 6 1271 2382 141 18 38 chr15 89928924 89929321 -13565653 + ORR1B1 LTR MaLR 6 394 0 6 1271 582 236 56 6 chr15 89929972 89930134 -13564840 + L1_Mur3 LINE L1 4074 4243 -1637 6 1271 190 225 16 62 chr15 89930377 89930505 -13564469 + (TATG)n Simple_repeat Simple_repeat 4 125 0 6 1271 286 337 0 0 chr15 89930511 89930597 -13564377 + (TG)n Simple_repeat Simple_repeat 1 86 0 6 1271 217 266 30 45 chr15 89930622 89930689 -13564285 + ID2 SINE ID 7 72 -11 6 1271 450 320 40 31 chr15 89931054 89931280 -13563694 - Lx8 LINE L1 -4 7469 7242 6 1271 703 262 74 15 chr15 89931403 89931740 -13563234 - L1_Mur3 LINE L1 -1051 4829 4473 6 1271 992 246 38 3 chr15 89931820 89932113 -13562861 - L1_Mur3 LINE L1 -1920 3960 3658 6 1271 1238 169 75 43 chr15 89932142 89932421 -13562553 + RMER10B LTR ERVL 1 288 -110 6 1271 235 377 88 0 chr15 89934719 89934878 -13560096 - LTR85b LTR Gypsy? -75 709 537 6 1271 180 152 0 0 chr15 89934907 89934940 -13560034 + (TA)n Simple_repeat Simple_repeat 2 34 0 6 1271 334 247 10 58 chr15 89934941 89935044 -13559930 - RLTR12B LTR ERVK 0 528 431 6 1271 218 156 0 0 chr15 89936352 89936384 -13558590 + B3A SINE B2 40 71 -127 6 1271 271 320 0 0 chr15 89936424 89936502 -13558472 - RMER4A LTR ERVK -382 84 7 6 1271 283 241 23 57 chr15 89937185 89937273 -13557701 + PB1D10 SINE Alu 21 105 -12 6 1271 226 250 103 48 chr15 89938091 89938217 -13556757 - L1M2 LINE L1 -1086 5054 4922 6 1271 280 318 11 0 chr15 89938298 89938386 -13556588 - ID_B1 SINE B4 -3 221 133 6 1271 459 0 0 0 chr15 89938386 89938437 -13556537 + (TCC)n Simple_repeat Simple_repeat 3 53 0 6 1271 483 308 110 18 chr15 89938466 89938847 -13556127 - L1M2 LINE L1 -1545 4598 4183 6 1271 25 0 0 0 chr15 89938995 89939020 -13555954 + AT_rich Low_complexity Low_complexity 1 25 0 6 1271 1264 133 0 89 chr15 89939344 89939591 -13555383 + URR1A DNA MER1_type 1 225 -1 6 1271 641 275 13 0 chr15 89940264 89940413 -13554561 - MTE2a LTR MaLR 0 379 229 6 1271 1764 200 40 6 chr15 89940459 89940660 -13554314 - ORR1B2 LTR MaLR -3 364 159 6 1271 675 94 0 0 chr15 89940660 89940756 -13554218 + (GA)n Simple_repeat Simple_repeat 1 96 0 6 1271 1764 200 40 6 chr15 89940756 89940906 -13554068 - ORR1B2 LTR MaLR -209 158 3 6 1271 530 253 88 65 chr15 89940913 89941198 -13553776 - ORR1D2 LTR MaLR -47 312 3 6 1271 21 0 0 0 chr15 89941395 89941416 -13553558 + AT_rich Low_complexity Low_complexity 1 21 0 6 1271 435 19 0 0 chr15 89941601 89941653 -13553321 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1271 573 293 60 5 chr15 89941790 89941989 -13552985 + B3 SINE B2 1 210 -6 6 1271 1425 81 5 0 chr15 89942025 89942211 -13552763 + B2_Mm1t SINE B2 2 188 -5 6 1271 218 32 32 0 chr15 89942299 89942330 -13552644 + (TAA)n Simple_repeat Simple_repeat 2 33 0 6 1271 621 325 50 58 chr15 89942894 89943257 -13551717 - LTR82A LTR ERVL -495 377 18 6 1271 223 265 0 0 chr15 89943363 89943412 -13551562 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1271 262 330 128 52 chr15 89943545 89943756 -13551218 - B4A SINE B4 -41 251 25 6 1271 286 298 68 21 chr15 89946048 89946240 -13548734 + L1MC4 LINE L1 7456 7656 -386 6 1271 491 323 74 27 chr15 89946779 89947116 -13547858 - Lx8 LINE L1 -8 7465 7113 6 1271 347 299 25 55 chr15 89947123 89947286 -13547688 - Lx8 LINE L1 -528 6945 6788 6 1271 276 30 0 0 chr15 89947291 89947324 -13547650 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 6 1271 1608 309 64 110 chr15 89947330 89947671 -13547303 - Lx8 LINE L1 -681 6792 6524 6 1271 4156 70 25 5 chr15 89947671 89948230 -13546744 - L1Md_F2 LINE L1 -1 6581 6012 6 1271 1608 289 46 92 chr15 89948230 89949395 -13545579 - Lx8 LINE L1 -950 6523 5343 6 1271 217 0 29 29 chr15 89949516 89949550 -13545424 + (TTTG)n Simple_repeat Simple_repeat 4 37 0 6 1271 1246 28 7 0 chr15 89951257 89951402 -13543572 + B1_Mus2 SINE Alu 2 147 0 6 1271 2321 88 25 3 chr15 89951737 89952057 -13542917 + ORR1A2 LTR MaLR 1 327 0 6 1271 309 194 19 13 chr15 89952095 89952172 -13542802 - B1F2 SINE Alu -36 91 10 6 1271 243 297 0 15 chr15 89952117 89952182 -13542792 - B4A SINE B4 -144 148 85 6 1271 417 363 117 42 chr15 89952379 89952900 -13542074 + L1MCa LINE L1 482 1041 -5467 6 1271 294 253 258 31 chr15 89952939 89953102 -13541872 + ID_B1 SINE B4 15 214 -10 6 1271 301 289 111 48 chr15 89953135 89953324 -13541650 + L1MA6 LINE L1 5831 6031 -269 7 1271 463 328 0 0 chr15 89953468 89953584 -13541390 + B3A SINE B2 1 116 -82 7 1271 450 0 0 0 chr15 89953617 89953667 -13541307 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 1271 1176 148 113 5 chr15 89955114 89955317 -13539657 - URR1B DNA MER1_type 0 225 1 7 1271 212 111 0 22 chr15 89955346 89955392 -13539582 + (CAAAA)n Simple_repeat Simple_repeat 3 47 0 7 1271 654 287 98 21 chr15 89956226 89956461 -13538513 - MER2 DNA MER2_type -2 343 91 7 1271 372 350 117 35 chr15 89956507 89956987 -13537987 + L2 LINE L2 2518 3036 -383 7 1271 6185 136 11 7 chr15 89957097 89957512 -13537462 + L1_Mus4 LINE L1 4810 5225 -658 7 1271 2958 76 2 27 chr15 89957512 89957918 -13537056 - MTA_Mm LTR MaLR 0 396 1 7 1271 6934 97 25 8 chr15 89957918 89959306 -13535668 + L1_Mus4 LINE L1 5226 6633 -3 7 1271 1230 237 60 57 chr15 89961247 89961563 -13533411 + MTD LTR MaLR 44 363 -56 7 1271 1410 82 16 0 chr15 89961563 89961746 -13533228 - B2_Mm2 SINE B2 -9 186 1 7 1271 1230 237 60 57 chr15 89961746 89961796 -13533178 + MTD LTR MaLR 364 411 -8 7 1271 641 177 0 0 chr15 89961867 89961980 -13532994 - RLTR12A LTR ERVK -455 113 1 7 1271 2308 246 56 53 chr15 89961980 89962606 -13532368 + MTC-int LTR MaLR 382 1009 -249 7 1271 435 206 0 0 chr15 89965207 89965220 -13529754 + A-rich Low_complexity Low_complexity 1 13 0 7 1271 426 39 0 0 chr15 89965220 89965272 -13529702 + (GGA)n Simple_repeat Simple_repeat 3 54 0 7 1271 435 206 0 0 chr15 89965272 89965355 -13529619 + A-rich Low_complexity Low_complexity 14 96 0 7 1271 973 142 117 27 chr15 89965364 89965552 -13529422 - RMER19A LTR ERVK 0 737 533 7 1271 599 251 20 85 chr15 89965554 89965754 -13529220 + RLTR9A LTR ERVK 182 368 0 7 1271 231 223 88 146 chr15 89966301 89966506 -13528468 - RLTR12A LTR ERVK 0 568 376 7 1271 328 269 46 86 chr15 89966492 89966667 -13528307 - RLTR15 LTR ERVK -144 215 48 7 1271 254 338 0 13 chr15 89966946 89967021 -13527953 + ID4_ SINE ID 6 79 -4 7 1271 2898 89 18 0 chr15 89967262 89967655 -13527319 + MTB LTR MaLR 1 400 0 7 1271 1098 205 24 14 chr15 89968188 89968401 -13526573 - RLTR18B LTR ERVK -1 511 297 7 1271 782 183 53 12 chr15 89968429 89968600 -13526374 - MTC LTR MaLR 0 421 244 7 1271 398 137 0 0 chr15 89968600 89968673 -13526301 + RMER1A Other Other 944 1016 -14 7 1271 207 242 0 59 chr15 89968781 89968882 -13526092 + T-rich Low_complexity Low_complexity 1 95 0 7 1271 382 260 11 33 chr15 89968908 89969091 -13525883 + T-rich Low_complexity Low_complexity 2 180 0 7 1271 730 181 60 0 chr15 89969106 89969239 -13525735 - B1_Mur3 SINE Alu 0 149 9 7 1271 288 0 0 0 chr15 89969357 89969389 -13525585 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 1271 231 152 0 61 chr15 89971568 89971617 -13523357 - MER34A LTR ERV1 -393 178 133 7 1271 461 322 34 0 chr15 89971618 89971767 -13523207 - MER34A LTR ERV1 -415 156 3 7 1271 285 138 138 0 chr15 89971781 89971861 -13523113 + L1MD LINE L1 5382 5472 -2523 7 1271 204 128 42 21 chr15 89971862 89971910 -13523064 + (TTAA)n Simple_repeat Simple_repeat 4 52 0 7 1271 207 0 0 0 chr15 89972359 89972382 -13522592 + (A)n Simple_repeat Simple_repeat 1 23 0 7 1271 3211 26 5 3 chr15 89972563 89972949 -13522025 + L1Md_F3 LINE L1 6196 6582 -2 7 1271 1048 281 115 70 chr15 89973916 89974506 -13520468 + Lx8 LINE L1 6498 7114 -359 7 1271 308 281 85 49 chr15 89974524 89974771 -13520203 + Lx8 LINE L1 7188 7443 -30 7 1271 281 176 60 42 chr15 89974901 89975067 -13519907 + (TATAA)n Simple_repeat Simple_repeat 1 169 0 7 1271 575 301 61 20 chr15 89975782 89975979 -13518995 - ID_B1 SINE B4 -19 205 1 7 1271 30 0 0 0 chr15 89976055 89976085 -13518889 + AT_rich Low_complexity Low_complexity 1 30 0 7 1271 717 274 20 82 chr15 89976155 89976350 -13518624 - B3 SINE B2 -15 183 1 7 1271 610 305 11 63 chr15 89976659 89976684 -13518290 + B3A SINE B2 1 18 -180 7 1271 1128 189 9 5 chr15 89976684 89976907 -13518067 + URR1B DNA MER1_type 2 225 0 7 1271 610 305 11 63 chr15 89976907 89977070 -13517904 + B3A SINE B2 19 179 -19 7 1271 1284 219 117 20 chr15 89977619 89977969 -13517005 - RMER5 LTR ERV1 -150 384 1 7 1271 286 310 0 12 chr15 89978147 89978232 -13516742 + GA-rich Low_complexity Low_complexity 1 84 0 7 1271 531 0 0 0 chr15 89979480 89979539 -13515435 + (TC)n Simple_repeat Simple_repeat 2 60 0 7 1271 1424 306 24 85 chr15 89979737 89980419 -13514555 + RMER15-int LTR ERVL 1270 1909 -3090 7 1271 231 304 60 43 chr15 89980439 89980556 -13514418 + Lx8 LINE L1 6969 7087 -386 7 1271 23 0 0 0 chr15 89981388 89981411 -13513563 + AT_rich Low_complexity Low_complexity 1 23 0 7 1271 506 294 151 18 chr15 89981684 89981909 -13513065 + RMER15 LTR ERVL 275 529 -46 7 1271 495 94 170 0 chr15 89981956 89982062 -13512912 - L1Md_F2 LINE L1 0 6582 6459 7 1271 4572 40 2 0 chr15 89982060 89982635 -13512339 - L1Md_F2 LINE L1 -282 6300 5725 7 1271 708 313 38 90 chr15 89982680 89983158 -13511816 + Lx8 LINE L1 6875 7327 -146 7 1271 285 29 0 0 chr15 89983158 89983192 -13511782 + (TC)n Simple_repeat Simple_repeat 1 34 0 7 1271 363 23 0 0 chr15 89983203 89983247 -13511727 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1271 231 188 49 24 chr15 89984140 89984222 -13510752 + Lx9 LINE L1 7530 7613 -31 7 1271 797 268 68 38 chr15 89984226 89984490 -13510484 - MTD LTR MaLR -28 391 120 7 1271 3413 181 50 0 chr15 89985173 89985284 -13509690 - RMER1A Other Other -7 1023 912 7 1271 378 0 0 0 chr15 89985284 89985326 -13509648 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1271 3413 181 50 0 chr15 89985326 89985861 -13509113 - RMER1A Other Other -119 911 346 7 1271 917 269 151 95 chr15 89986290 89986787 -13508187 - RMER4B LTR ERVK 0 585 61 7 1271 1014 63 0 0 chr15 89987319 89987445 -13507529 + B1_Mm SINE Alu 9 134 -13 7 1271 183 42 0 0 chr15 89987445 89987469 -13507505 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 7 1271 749 295 12 45 chr15 89988588 89988918 -13506056 - Lx9 LINE L1 -218 7426 7108 7 1271 747 247 46 198 chr15 89988999 89989474 -13505500 - RLTR12B LTR ERVK -30 498 96 7 1271 1375 241 6 0 chr15 89989650 89989961 -13505013 - Lx9 LINE L1 -607 7037 6725 7 1271 1137 266 45 13 chr15 89989995 89990304 -13504670 + Lx9 LINE L1 6395 6713 -931 7 1271 501 310 39 44 chr15 89990410 89990592 -13504382 - B3A SINE B2 -16 182 2 7 1271 1265 240 133 11 chr15 89990781 89991143 -13503831 + MTD LTR MaLR 1 406 -13 7 1271 1295 90 40 0 chr15 89991361 89991538 -13503436 - B2_Mm2 SINE B2 -10 185 2 7 1271 462 140 0 0 chr15 89991580 89991680 -13503294 + (TC)n Simple_repeat Simple_repeat 1 100 0 7 1271 441 0 0 0 chr15 89991680 89991729 -13503245 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1271 492 252 51 17 chr15 89991738 89991855 -13503119 - RSINE1 SINE B4 -22 143 23 7 1271 189 0 0 0 chr15 89993484 89993505 -13501469 + (TC)n Simple_repeat Simple_repeat 2 22 0 7 1271 506 241 41 33 chr15 89993558 89993766 -13501208 - L1M3 LINE L1 -2032 4111 3896 7 1271 295 292 139 30 chr15 89994224 89994425 -13500549 + RMER5 LTR ERV1 112 334 -200 7 1271 411 257 20 0 chr15 89994487 89994588 -13500386 + RMER5 LTR ERV1 1 103 -431 7 1271 332 17 0 65 chr15 89994821 89994883 -13500091 - Lx LINE L1 0 6654 6597 7 1271 764 111 0 0 chr15 89994883 89994991 -13499983 + Lx LINE L1 6103 6210 -444 7 1271 710 65 0 21 chr15 89995011 89995098 -13499876 + B1_Mus2 SINE Alu 51 137 -10 7 1271 198 0 0 0 chr15 89995098 89995120 -13499854 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 7 1271 22 0 0 0 chr15 89995177 89995199 -13499775 + AT_rich Low_complexity Low_complexity 1 22 0 7 1271 261 240 51 39 chr15 89995434 89995512 -13499462 - MT2B LTR ERVL -3 598 520 7 1271 642 322 60 48 chr15 89995504 89995772 -13499202 + RMER15 LTR ERVL 292 562 -13 7 1271 2584 331 48 38 chr15 89995784 89997190 -13497784 + RMER15-int LTR ERVL 4 1423 -3576 7 1271 347 345 32 33 chr15 89997319 89997468 -13497506 + MIR SINE MIR 15 162 -106 7 1271 268 330 87 74 chr15 89998724 89998953 -13496021 + MTE-int LTR MaLR 271 502 -1078 7 1271 1674 252 16 46 chr15 90000068 90000286 -13494688 + MTD LTR MaLR 1 211 -208 1 1271 2199 123 3 35 chr15 90000286 90000631 -13494343 + Lx3B LINE L1 6635 6968 -5 2 1271 1674 252 16 46 chr15 90000631 90000844 -13494130 + MTD LTR MaLR 212 419 0 1 1271 321 26 0 0 chr15 90001038 90001076 -13493898 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 3 1271 70 59 0 0 chr15 90001081 90001200 -13493774 + AT_rich Low_complexity Low_complexity 1 119 0 4 1271 6782 59 0 1 chr15 90001200 90001995 -13492979 - L1_Mus1 LINE L1 0 6567 5774 5 1271 730 286 6 6 chr15 90002460 90002643 -13492331 - Lx8 LINE L1 -901 6572 6390 6 1271 641 230 209 69 chr15 90002663 90002685 -13492289 - RMER5 LTR ERV1 -8 526 509 7 1271 1736 224 8 58 chr15 90002685 90003079 -13491895 - ORR1D1 LTR MaLR 0 374 1 8 1271 641 230 209 69 chr15 90003079 90003420 -13491554 - RMER5 LTR ERV1 -26 508 112 7 1271 372 275 200 0 chr15 90003569 90003689 -13491285 - RMER15-int LTR ERVL -708 4291 4148 9 1271 586 299 77 16 chr15 90005353 90005588 -13489386 - MIR SINE MIR -8 260 15 1 1271 1221 68 0 20 chr15 90005860 90005999 -13488975 + B1_Mus1 SINE Alu 1 139 -9 1 1271 210 37 0 0 chr15 90005999 90006026 -13488948 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1271 225 0 0 0 chr15 90007646 90007671 -13487303 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1271 405 345 14 7 chr15 90009570 90009713 -13485261 - Lx8 LINE L1 -220 7253 7110 1 1271 476 32 16 0 chr15 90009889 90009951 -13485023 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 1 1271 344 328 102 51 chr15 90010053 90010268 -13484706 + Lx8 LINE L1 7242 7467 -6 1 1271 475 279 62 133 chr15 90010593 90011224 -13483750 + L1ME2 LINE L1 5405 5983 -181 1 1271 1876 212 21 21 chr15 90012419 90012795 -13482179 - MTD LTR MaLR -2 417 42 1 1271 1791 157 70 20 chr15 90012795 90012848 -13482126 - L1_Mur2 LINE L1 -1394 4483 4431 1 1271 210 37 0 0 chr15 90012848 90012875 -13482099 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1271 1165 78 0 0 chr15 90012875 90013016 -13481958 - B1_Mus2 SINE Alu -2 145 5 2 1271 1791 157 70 20 chr15 90013016 90013306 -13481668 - L1_Mur2 LINE L1 -1447 4430 4123 1 1271 349 282 151 18 chr15 90013306 90013382 -13481592 - MTC-int LTR MaLR -156 1102 1008 2 1271 353 75 19 0 chr15 90013382 90013435 -13481539 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 2 1271 349 282 151 18 chr15 90013435 90013524 -13481450 - MTC-int LTR MaLR -251 1007 916 2 1271 2938 85 41 13 chr15 90013548 90013940 -13481034 + RLTR9D LTR ERVK 1 403 0 2 1271 1434 45 0 0 chr15 90014466 90014644 -13480330 + (TG)n Simple_repeat Simple_repeat 2 179 0 2 1271 23 43 0 21 chr15 90014770 90014788 -13480186 + AT_rich Low_complexity Low_complexity 1 18 0 2 1271 1290 54 0 0 chr15 90014788 90014936 -13480038 + B1_Mus1 SINE Alu 1 148 0 2 1271 23 43 0 21 chr15 90014936 90014965 -13480009 + AT_rich Low_complexity Low_complexity 1 29 0 2 1271 207 69 0 0 chr15 90015204 90015233 -13479741 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1271 180 77 0 0 chr15 90015676 90015702 -13479272 + (G)n Simple_repeat Simple_repeat 1 26 0 3 1271 336 48 0 0 chr15 90015852 90015894 -13479080 + (TGAG)n Simple_repeat Simple_repeat 1 42 0 3 1271 1721 222 52 101 chr15 90016012 90016568 -13478406 - RMER5 LTR ERV1 -4 530 2 3 1271 430 363 69 58 chr15 90016903 90017163 -13477811 + B4 SINE B4 2 264 -28 3 1271 276 30 0 0 chr15 90017195 90017228 -13477746 + (TC)n Simple_repeat Simple_repeat 1 33 0 3 1271 246 105 0 0 chr15 90017228 90017265 -13477709 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1271 24 32 0 0 chr15 90017298 90017329 -13477645 + AT_rich Low_complexity Low_complexity 1 31 0 3 1271 1966 144 178 28 chr15 90017930 90018330 -13476644 + RMER6B LTR ERVK 1 460 -1 3 1271 840 264 53 164 chr15 90019101 90019478 -13475496 + MTD LTR MaLR 46 380 -39 3 1271 438 20 0 0 chr15 90020456 90020507 -13474467 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1271 323 288 0 12 chr15 90020542 90020623 -13474351 + (TG)n Simple_repeat Simple_repeat 1 80 0 3 1271 1178 232 44 40 chr15 90021224 90021498 -13473476 + MTD LTR MaLR 1 275 -144 4 1271 393 221 61 88 chr15 90021820 90021934 -13473040 - ETnERV2-int LTR ERVK -213 7193 7083 4 1271 307 210 32 10 chr15 90021935 90022015 -13472959 + MTD LTR MaLR 250 333 -86 4 1271 352 268 2 13 chr15 90022691 90022795 -13472179 - MLT1D LTR MaLR -392 113 9 4 1271 36282 36 1 0 chr15 90023107 90028767 -13466207 + L1Md_T LINE L1 1 5589 -297 4 1271 9539 6 1 0 chr15 90028767 90029799 -13465175 + L1Md_T LINE L1 5590 6585 0 4 1271 387 286 39 128 chr15 90029865 90029890 -13465084 - B2_Mm2 SINE B2 -9 186 164 4 1271 582 15 0 0 chr15 90029890 90029957 -13465017 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 1271 681 286 39 128 chr15 90029957 90030135 -13464839 - B3A SINE B2 -30 168 1 4 1271 1147 278 28 28 chr15 90030898 90031364 -13463610 - L1M3 LINE L1 -1477 4663 4198 4 1271 1202 234 157 6 chr15 90031370 90031689 -13463285 + Lx8 LINE L1 6338 6704 -769 4 1271 1363 303 8 42 chr15 90031687 90031841 -13463133 + Lx8 LINE L1 6975 7124 -349 4 1271 720 89 0 0 chr15 90031841 90031942 -13463032 + (GGAGA)n Simple_repeat Simple_repeat 3 103 0 4 1271 1363 303 8 42 chr15 90031942 90032293 -13462681 + Lx8 LINE L1 7125 7463 -10 4 1271 763 271 49 5 chr15 90032480 90032684 -13462290 + B3 SINE B2 1 213 -3 4 1271 486 72 0 54 chr15 90034134 90034208 -13460766 + B1_Mur4 SINE Alu 80 149 -1 5 1271 458 328 51 68 chr15 90035658 90036132 -13458842 - MER52-int LTR ERV1 -3355 3736 3271 5 1271 1682 209 44 29 chr15 90036617 90037001 -13457973 - MTD LTR MaLR 0 419 30 5 1271 198 0 0 0 chr15 90038196 90038218 -13456756 + (TTGTG)n Simple_repeat Simple_repeat 2 23 0 5 1271 456 72 0 0 chr15 90038903 90038972 -13456002 + (GA)n Simple_repeat Simple_repeat 1 69 0 5 1271 268 243 26 26 chr15 90040106 90040182 -13454792 + ID4 SINE ID 4 79 -4 5 1271 2465 102 9 0 chr15 90040343 90040667 -13454307 - ORR1A2 LTR MaLR 0 327 1 5 1271 192 40 0 0 chr15 90040701 90040726 -13454248 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 1271 640 307 107 32 chr15 90041918 90042170 -13452804 - B4A SINE B4 -21 271 1 5 1271 279 322 75 27 chr15 90042388 90042576 -13452398 - MER5C DNA MER1_type -6 307 111 5 1271 1309 256 85 11 chr15 90042604 90042621 -13452353 + MTD LTR MaLR 3 19 -400 6 1271 342 0 0 0 chr15 90042621 90042659 -13452315 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 1271 1309 251 73 12 chr15 90042659 90043030 -13451944 + MTD LTR MaLR 20 405 -14 6 1271 27 0 0 0 chr15 90043699 90043726 -13451248 + AT_rich Low_complexity Low_complexity 1 27 0 6 1271 205 86 29 0 chr15 90043875 90043910 -13451064 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 6 1271 1330 102 37 16 chr15 90043916 90044106 -13450868 + B2_Mm2 SINE B2 1 194 -1 6 1271 278 322 79 38 chr15 90044404 90044694 -13450280 + L1M5 LINE L1 5313 5614 -559 6 1271 24 0 0 0 chr15 90045931 90045955 -13449019 + AT_rich Low_complexity Low_complexity 1 24 0 6 1272 1181 45 0 0 chr15 90046578 90046711 -13448263 - B1_Mus2 SINE Alu -14 133 1 6 1272 294 184 0 0 chr15 90046711 90046787 -13448187 + CT-rich Low_complexity Low_complexity 3 78 0 6 1272 1356 96 0 2 chr15 90046789 90047198 -13447776 + (TTC)n Simple_repeat Simple_repeat 1 407 0 6 1272 252 214 149 35 chr15 90047381 90047468 -13447506 - B4A SINE B4 0 292 196 7 1272 256 150 0 0 chr15 90047481 90047521 -13447453 - URR1B DNA MER1_type 0 225 186 7 1272 1010 197 0 0 chr15 90047596 90047779 -13447195 - URR1B DNA MER1_type -43 182 1 7 1272 409 261 11 0 chr15 90047916 90048004 -13446970 - B4A SINE B4 -202 90 2 7 1272 181 387 9 18 chr15 90048025 90048138 -13446836 - MER5A DNA MER1_type -66 123 12 7 1272 533 259 28 115 chr15 90048457 90048710 -13446264 + RLTR14 LTR ERV1 152 382 0 7 1272 573 119 175 0 chr15 90050147 90050182 -13444792 + RMER4A LTR ERVK 1 35 -431 7 1272 294 29 0 0 chr15 90050182 90050217 -13444757 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1272 573 119 175 0 chr15 90050217 90050295 -13444679 + RMER4A LTR ERVK 36 135 -331 7 1272 1083 83 0 0 chr15 90050295 90050440 -13444534 - BGLII LTR ERVK 0 421 277 7 1272 1973 159 114 16 chr15 90050441 90050890 -13444084 - RMER3D-int LTR ERVK -1336 1506 1014 7 1272 380 79 88 22 chr15 90050935 90051026 -13443948 + CT-rich Low_complexity Low_complexity 4 100 0 7 1272 473 116 42 70 chr15 90051030 90051150 -13443824 - RMER3D-int LTR ERVK -2250 592 489 7 1272 3282 75 19 0 chr15 90051555 90051968 -13443006 - BGLII LTR ERVK 0 421 1 7 1272 1745 173 48 18 chr15 90051968 90052298 -13442676 + RMER4A LTR ERVK 127 466 0 7 1272 189 0 0 0 chr15 90052845 90052866 -13442108 + (A)n Simple_repeat Simple_repeat 1 21 0 8 1272 1064 51 71 28 chr15 90052885 90053026 -13441948 + B1_Mus2 SINE Alu 1 147 0 8 1272 207 0 0 0 chr15 90053259 90053282 -13441692 + (A)n Simple_repeat Simple_repeat 1 23 0 8 1272 416 211 45 55 chr15 90054064 90054174 -13440800 - B1F SINE Alu -7 110 2 8 1272 207 0 0 0 chr15 90054845 90054868 -13440106 + (CCCG)n Simple_repeat Simple_repeat 3 25 0 8 1272 698 240 32 64 chr15 90055694 90055912 -13439062 + B3 SINE B2 1 211 -5 8 1272 346 317 189 11 chr15 90056607 90056798 -13438176 + MIR SINE MIR 34 258 -4 8 1272 717 226 7 0 chr15 90057021 90057158 -13437816 - B1_Mur1 SINE Alu -10 139 2 8 1272 241 342 54 7 chr15 90060072 90060219 -13434755 + B3A SINE B2 15 168 -30 8 1272 182 335 146 47 chr15 90061869 90062082 -13432892 + L3 LINE CR1 3898 4131 -358 8 1272 572 240 124 11 chr15 90062815 90063000 -13431974 - ID_B1 SINE B4 -17 207 2 9 1272 196 324 126 10 chr15 90063285 90063388 -13431586 - MIR SINE MIR -135 127 13 9 1272 270 0 0 0 chr15 90064191 90064221 -13430753 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 9 1272 238 224 182 27 chr15 90065042 90065152 -13429822 - Lx8 LINE L1 -353 7120 6994 9 1272 1758 294 50 42 chr15 90065182 90065867 -13429107 - Lx8 LINE L1 -581 6892 6203 9 1272 303 296 97 23 chr15 90066124 90066432 -13428542 - L1_Mur3 LINE L1 -4306 1574 1244 9 1272 1660 241 46 3 chr15 90067004 90067068 -13427906 + MTD LTR MaLR 38 106 -313 9 1272 1725 157 162 23 chr15 90067068 90067414 -13427560 - ORR1B1 LTR MaLR 0 394 1 9 1272 1660 241 46 3 chr15 90067414 90067715 -13427259 + MTD LTR MaLR 107 418 -1 9 1272 1179 226 68 52 chr15 90069238 90069750 -13425224 - RMER2 LTR ERV1 -5 562 3 9 1272 255 253 53 0 chr15 90069914 90069989 -13424985 - MIR SINE MIR -21 241 163 9 1272 203 176 0 0 chr15 90070022 90070056 -13424918 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 9 1272 683 249 64 12 chr15 90070377 90070548 -13424426 - B3A SINE B2 -16 182 3 1 1272 582 237 76 15 chr15 90070682 90070851 -13424123 + B3A SINE B2 2 180 -36 1 1272 408 317 23 63 chr15 90071623 90071798 -13423176 + MTEa LTR MaLR 5 172 -207 1 1272 2860 46 0 14 chr15 90072778 90073129 -13421845 - ORR1A1 LTR MaLR 0 346 1 1 1272 3150 27 0 0 chr15 90073251 90073619 -13421355 - L1Md_F2 LINE L1 -13 6569 6202 1 1272 228 143 0 0 chr15 90075232 90075274 -13419700 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1272 327 25 0 0 chr15 90075444 90075484 -13419490 + (TGAA)n Simple_repeat Simple_repeat 3 42 0 1 1272 636 264 109 6 chr15 90077334 90077647 -13417327 + L1M2 LINE L1 4494 4838 -1305 1 1272 324 0 0 0 chr15 90077648 90077684 -13417290 + (TTATA)n Simple_repeat Simple_repeat 4 39 0 1 1272 1296 178 21 138 chr15 90077844 90078221 -13416753 - ORR1C1 LTR MaLR 0 378 46 1 1272 1713 320 53 47 chr15 90078245 90079116 -13415858 - Lx8 LINE L1 -145 7328 6453 1 1272 733 287 158 39 chr15 90079125 90080060 -13414914 + L1_Mur3 LINE L1 4796 5867 -13 1 1272 784 291 20 23 chr15 90081360 90081705 -13413269 + Lx9 LINE L1 7103 7446 -198 1 1272 512 264 41 46 chr15 90081866 90082084 -13412890 - MERVL_2A-int LTR ERVL -2751 3010 2794 1 1272 317 335 63 69 chr15 90082334 90082523 -13412451 - ORR1E LTR MaLR -168 191 4 1 1272 27 29 0 0 chr15 90082587 90082621 -13412353 + AT_rich Low_complexity Low_complexity 1 34 0 1 1272 914 146 7 7 chr15 90082664 90082809 -13412165 - B1_Mus1 SINE Alu -3 145 1 1 1272 311 355 19 0 chr15 90083256 90083363 -13411611 + MamRep605 Unknown Unknown 424 532 -344 1 1272 839 329 37 7 chr15 90083725 90084132 -13410842 - ERVL-B4-int LTR ERVL -4434 1280 862 1 1272 297 75 0 0 chr15 90084609 90084649 -13410325 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1272 677 295 102 63 chr15 90084877 90085290 -13409684 - MT2A LTR ERVL -2 531 103 1 1272 874 160 112 0 chr15 90085354 90085523 -13409451 + URR1A DNA MER1_type 39 226 0 1 1272 2038 96 8 88 chr15 90086574 90086868 -13408106 + ORR1A3 LTR MaLR 1 280 -46 1 1272 2894 53 8 21 chr15 90086868 90087252 -13407722 + L1_Mus2 LINE L1 6188 6566 0 1 1272 2038 96 8 88 chr15 90087252 90087310 -13407664 + ORR1A3 LTR MaLR 281 325 -1 1 1272 328 284 109 92 chr15 90087311 90087614 -13407360 + L1M4 LINE L1 4608 4915 -1231 1 1272 453 240 40 0 chr15 90087615 90087715 -13407259 + ID_B1 SINE B4 99 202 -22 1 1272 8666 199 69 11 chr15 90087716 90090138 -13404836 - Lx7 LINE L1 -1533 6163 3603 1 1272 2022 244 92 26 chr15 90090253 90090756 -13404218 - Lx8 LINE L1 -85 7388 6857 1 1272 234 0 0 0 chr15 90090756 90090782 -13404192 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1272 2022 244 92 26 chr15 90090782 90090923 -13404051 - Lx8 LINE L1 -617 6856 6702 1 1272 5623 38 0 0 chr15 90090946 90091611 -13403363 + L1Md_T LINE L1 5916 6580 -2 1 1272 1473 184 124 0 chr15 90091913 90092277 -13402697 + Lx9 LINE L1 7236 7644 0 1 1272 1118 268 27 24 chr15 90092282 90092576 -13402398 - MTD LTR MaLR -124 295 1 1 1272 313 356 80 52 chr15 90092859 90093072 -13401902 + LTR84a LTR ERVL 18 236 -521 1 1272 208 367 0 0 chr15 90093702 90093781 -13401193 - MIRb SINE MIR -73 195 117 1 1272 194 62 0 30 chr15 90093817 90093850 -13401124 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 1 1272 213 39 0 0 chr15 90093860 90093886 -13401088 + (TCTA)n Simple_repeat Simple_repeat 4 29 0 1 1272 2238 101 25 0 chr15 90094065 90094383 -13400591 - ORR1A3 LTR MaLR 0 326 1 1 1272 183 114 0 0 chr15 90094605 90094640 -13400334 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1272 3228 95 11 13 chr15 90094737 90095205 -13399769 - RLTR31B_Mm LTR ERVK -90 467 1 1 1272 298 294 70 16 chr15 90095210 90095338 -13399636 + Lx8 LINE L1 6758 6892 -581 1 1272 425 160 84 11 chr15 90095387 90095482 -13399492 - B1_Mur4 SINE Alu -47 103 2 1 1272 719 307 20 4 chr15 90095509 90095761 -13399213 + Lx8 LINE L1 7093 7348 -125 1 1272 246 358 21 0 chr15 90095941 90096036 -13398938 + GA-rich Low_complexity Low_complexity 2 98 0 1 1272 517 329 31 7 chr15 90096761 90097049 -13397925 - L1MB8 LINE L1 -57 6121 5827 1 1272 292 222 130 0 chr15 90097130 90097238 -13397736 - L1MC1 LINE L1 -13 6320 6199 1 1272 21 0 0 0 chr15 90097456 90097477 -13397497 + AT_rich Low_complexity Low_complexity 1 21 0 1 1272 288 317 232 37 chr15 90098093 90098751 -13396223 - ERVL-B4-int LTR ERVL -3880 1877 1052 1 1272 379 330 79 44 chr15 90098756 90099073 -13395901 - ERVL-B4-int LTR ERVL -4617 1097 770 1 1272 294 342 12 7 chr15 90099125 90099303 -13395671 - ERVL-B4-int LTR ERVL -5063 694 514 1 1272 392 305 31 43 chr15 90099581 90099742 -13395232 + RLTR14 LTR ERV1 224 382 0 1 1272 7208 35 0 0 chr15 90100432 90101328 -13393646 - L1Md_F2 LINE L1 0 6582 5687 1 1272 531 331 8 0 chr15 90102293 90102482 -13392492 + MLT1A0 LTR MaLR 8 198 -210 1 1272 534 70 0 0 chr15 90102482 90102553 -13392421 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 1 1272 2396 275 65 18 chr15 90103634 90104466 -13390508 + L1_Mur3 LINE L1 343 1213 -6515 1 1272 1948 184 111 18 chr15 90104478 90105027 -13389947 + L1_Mur3 LINE L1 1286 1885 -3995 1 1272 864 84 27 47 chr15 90105029 90105179 -13389795 + RLTR11A2 LTR ERVK 381 527 0 1 1272 382 203 36 29 chr15 90105412 90105549 -13389425 - L1_Mur3 LINE L1 -2644 3236 3099 1 1272 396 0 0 0 chr15 90105691 90105735 -13389239 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1272 694 286 75 131 chr15 90106039 90106482 -13388492 - RLTR23 LTR ERV1 -5 425 8 1 1272 234 0 0 0 chr15 90106968 90106994 -13387980 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1272 211 72 23 23 chr15 90108373 90108416 -13386558 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 1 1272 348 24 0 0 chr15 90108473 90108514 -13386460 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1272 435 38 0 0 chr15 90109069 90109122 -13385852 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1272 1039 291 76 25 chr15 90109146 90109699 -13385275 + L1MA5 LINE L1 5693 6273 -27 1 1272 405 0 0 0 chr15 90110202 90110247 -13384727 + (GA)n Simple_repeat Simple_repeat 1 45 0 1 1272 198 0 0 0 chr15 90110774 90110796 -13384178 + (TC)n Simple_repeat Simple_repeat 2 23 0 1 1272 423 0 0 0 chr15 90110796 90110842 -13384132 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1272 400 117 26 0 chr15 90110889 90110966 -13384008 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 1 1272 376 343 14 10 chr15 90111109 90111318 -13383656 - L1M2 LINE L1 -1917 4226 4017 1 1272 367 322 101 28 chr15 90111325 90111651 -13383323 - L1M2 LINE L1 -3392 2751 2402 1 1272 258 32 0 0 chr15 90111658 90111689 -13383285 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1272 489 138 0 0 chr15 90113083 90113163 -13381811 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 1272 300 203 0 33 chr15 90114106 90114167 -13380807 + B1_Mus2 SINE Alu 1 59 -88 1 1272 1156 159 0 11 chr15 90114169 90114549 -13380425 + (CAGAGA)n Simple_repeat Simple_repeat 1 376 0 1 1272 606 103 20 40 chr15 90114549 90114650 -13380324 + B1_Mur3 SINE Alu 40 138 -11 1 1272 2658 31 75 0 chr15 90115352 90115674 -13379300 - ORR1A1 LTR MaLR 0 346 1 1 1272 609 156 9 0 chr15 90115743 90115852 -13379122 - RLTR42-int LTR ERVK -3282 2240 2131 1 1272 180 0 0 0 chr15 90116525 90116545 -13378429 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1272 2146 50 0 0 chr15 90116613 90116875 -13378099 - L1Md_A LINE L1 0 6582 6321 1 1272 310 302 72 70 chr15 90116912 90117177 -13377797 - L1M2 LINE L1 -3951 2898 2637 1 1272 342 0 0 0 chr15 90117177 90117215 -13377759 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 1 1272 310 302 72 70 chr15 90117215 90117294 -13377680 - L1M2 LINE L1 -4213 2636 2553 1 1272 411 73 0 0 chr15 90117385 90117440 -13377534 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1 1272 28 0 0 0 chr15 90117787 90117815 -13377159 + AT_rich Low_complexity Low_complexity 1 28 0 1 1272 421 199 20 24 chr15 90117855 90117957 -13377017 + MTC LTR MaLR 1 106 -290 1 1272 21 36 0 0 chr15 90117962 90117990 -13376984 + AT_rich Low_complexity Low_complexity 1 28 0 1 1272 490 142 243 15 chr15 90118001 90118137 -13376837 - Lx3B LINE L1 -95 6878 6712 1 1272 7502 52 13 1 chr15 90118132 90119244 -13375730 + L1_Mus1 LINE L1 5443 6567 0 1 1272 34 55 0 0 chr15 90119244 90119299 -13375675 + AT_rich Low_complexity Low_complexity 1 55 0 1 1272 519 17 0 0 chr15 90119465 90119525 -13375449 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 1272 650 337 12 0 chr15 90119672 90119921 -13375053 + Lx8 LINE L1 6478 6729 -744 1 1272 3169 43 10 17 chr15 90120338 90120741 -13374233 + MTB LTR MaLR 1 400 0 1 1272 2074 121 61 33 chr15 90121086 90121445 -13373529 + ORR1C1 LTR MaLR 1 369 -9 1 1272 274 315 42 36 chr15 90122224 90122392 -13372582 - MER89 LTR ERV1 0 559 391 1 1272 248 240 27 0 chr15 90122542 90122617 -13372357 - MER89 LTR ERV1 -482 77 1 1 1272 22 0 0 0 chr15 90123589 90123611 -13371363 + AT_rich Low_complexity Low_complexity 1 22 0 1 1272 243 0 0 0 chr15 90123645 90123672 -13371302 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1272 414 0 0 0 chr15 90123690 90123736 -13371238 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 1272 2900 192 74 8 chr15 90123960 90124596 -13370378 + Lx5 LINE L1 5957 6634 -416 1 1272 708 230 26 20 chr15 90124596 90124765 -13370209 + Lx5 LINE L1 6823 7024 -34 1 1272 723 71 0 0 chr15 90124765 90124863 -13370111 + (GA)n Simple_repeat Simple_repeat 2 99 0 1 1272 536 265 87 29 chr15 90124863 90124899 -13370075 + Lx5 LINE L1 7025 7056 -2 1 1272 220 189 0 0 chr15 90125733 90125770 -13369204 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1272 3930 54 6 12 chr15 90126162 90126668 -13368306 + RLTR1C LTR ERV1 1 503 0 1 1272 3645 195 45 12 chr15 90127197 90128647 -13366327 + L1_Rod LINE L1 525 2025 -3822 1 1272 23 33 0 0 chr15 90129514 90129544 -13365430 + AT_rich Low_complexity Low_complexity 1 30 0 1 1272 360 0 0 0 chr15 90130000 90130040 -13364934 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1272 245 209 0 118 chr15 90130672 90130748 -13364226 + ID4 SINE ID 3 69 -14 1 1272 2982 74 5 10 chr15 90130840 90131238 -13363736 + MTA_Mm LTR MaLR 1 396 0 1 1272 6705 84 105 14 chr15 90131238 90132244 -13362730 + MTA_Mm-int LTR MaLR 1 1098 0 1 1272 3056 61 2 15 chr15 90132246 90132645 -13362329 + MTA_Mm LTR MaLR 3 396 0 1 1272 24 0 0 0 chr15 90133142 90133166 -13361808 + AT_rich Low_complexity Low_complexity 1 24 0 2 1272 714 256 25 12 chr15 90133270 90133432 -13361542 + B3A SINE B2 3 166 -32 2 1272 201 39 0 0 chr15 90133433 90133459 -13361515 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 1272 216 97 0 0 chr15 90133459 90133490 -13361484 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 1272 255 114 0 0 chr15 90133781 90133825 -13361149 + (TATG)n Simple_repeat Simple_repeat 2 45 0 2 1272 311 331 30 75 chr15 90133989 90134123 -13360851 - MER44D DNA MER2_type -466 239 112 2 1272 226 304 137 33 chr15 90134191 90134344 -13360630 - MLT1F2-int LTR MaLR -583 906 738 2 1272 307 303 96 26 chr15 90134369 90134525 -13360449 - MLT1F2-int LTR MaLR -849 640 474 2 1272 367 290 84 35 chr15 90134594 90134737 -13360237 - MLT1F2 LTR MaLR -29 531 382 2 1272 1580 47 0 0 chr15 90135011 90135202 -13359772 - B2_Mm1a SINE B2 -1 192 2 2 1272 378 287 30 23 chr15 90136167 90136299 -13358675 - RSINE1 SINE B4 -30 135 3 2 1272 1943 233 76 135 chr15 90138112 90138832 -13356142 + RLTR22_Mur LTR ERVK 1 694 -1154 2 1272 1886 99 243 12 chr15 90138832 90139169 -13355805 - RLTR9F LTR ERVK 0 415 1 2 1272 1943 233 76 135 chr15 90139169 90139292 -13355682 + RLTR22_Mur LTR ERVK 695 794 -1054 2 1272 300 310 53 43 chr15 90139382 90139582 -13355392 + RMER12 LTR ERVK 994 1172 -150 2 1272 839 222 107 128 chr15 90139733 90140022 -13354952 + MT2A LTR ERVL 1 283 -250 2 1272 302 277 48 0 chr15 90140022 90140105 -13354869 - Lx8 LINE L1 -1192 6281 6195 2 1272 536 77 13 0 chr15 90140105 90140183 -13354791 + (TC)n Simple_repeat Simple_repeat 2 80 0 2 1272 302 350 12 59 chr15 90140383 90140553 -13354421 + LTR40b LTR ERVL 51 212 -250 2 1272 406 330 133 67 chr15 90140662 90140977 -13353997 - MLT1A1 LTR MaLR 0 408 73 2 1272 218 261 128 21 chr15 90141385 90141479 -13353495 + MIR SINE MIR 80 183 -79 2 1272 330 104 21 0 chr15 90141822 90141870 -13353104 - RLTR11A2 LTR ERVK -462 65 17 2 1272 384 22 0 0 chr15 90141921 90141966 -13353008 + (TC)n Simple_repeat Simple_repeat 1 45 0 2 1272 1301 294 24 13 chr15 90141969 90142345 -13352629 - Lx5 LINE L1 -35 7015 6636 2 1272 582 283 38 27 chr15 90142365 90142578 -13352396 - MTD LTR MaLR -209 210 8 2 1272 229 136 15 15 chr15 90143928 90143995 -13350979 + (CAAA)n Simple_repeat Simple_repeat 3 69 0 2 1272 210 71 0 0 chr15 90143995 90144023 -13350951 + (CCA)n Simple_repeat Simple_repeat 3 30 0 2 1272 292 265 60 15 chr15 90144675 90144809 -13350165 + L1MA4 LINE L1 5779 5918 -382 2 1272 1413 53 26 11 chr15 90145045 90145205 -13349769 + B2_Mm1t SINE B2 1 160 -33 2 1272 198 0 0 0 chr15 90145205 90145227 -13349747 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 2 1272 1413 53 26 11 chr15 90145227 90145256 -13349718 + B2_Mm1t SINE B2 161 192 -1 2 1272 24 77 0 0 chr15 90145257 90145309 -13349665 + AT_rich Low_complexity Low_complexity 1 52 0 2 1272 576 114 60 0 chr15 90146783 90146932 -13348042 + (TAGA)n Simple_repeat Simple_repeat 3 160 0 2 1272 283 174 0 104 chr15 90147597 90147674 -13347300 - ID_B1 SINE B4 0 224 156 2 1272 577 82 0 45 chr15 90147605 90147694 -13347280 - B1_Mm SINE Alu -3 144 60 2 1272 606 124 0 0 chr15 90147661 90147750 -13347224 + B1_Mm SINE Alu 12 100 -47 2 1272 28 0 0 0 chr15 90147912 90147940 -13347034 + AT_rich Low_complexity Low_complexity 1 28 0 2 1272 6779 85 60 6 chr15 90148439 90148592 -13346382 - RLTR13D5 LTR ERVK 0 1023 828 2 1272 4000 55 10 8 chr15 90148592 90149108 -13345866 - L1Md_F3 LINE L1 0 6584 6068 2 1272 6779 93 60 7 chr15 90149108 90149959 -13345015 - RLTR13D5 LTR ERVK -196 827 2 2 1272 185 304 109 0 chr15 90150299 90150391 -13344583 + MIR SINE MIR 40 141 -67 2 1272 215 119 60 0 chr15 90150863 90150930 -13344044 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 1272 289 343 0 48 chr15 90151175 90151279 -13343695 + RMER5 LTR ERV1 215 313 -221 2 1272 225 132 0 0 chr15 90151336 90151374 -13343600 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2 1272 334 283 20 10 chr15 90151483 90151583 -13343391 - MLT2C1 LTR ERVL -291 106 6 2 1272 205 149 0 29 chr15 90152718 90152787 -13342187 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 2 1272 1231 145 15 10 chr15 90153022 90153264 -13341710 + MTC LTR MaLR 32 321 -100 2 1272 490 235 0 0 chr15 90153871 90153973 -13341001 + MTC LTR MaLR 317 418 -3 2 1272 1365 52 0 0 chr15 90154296 90154470 -13340504 + (CA)n Simple_repeat Simple_repeat 1 174 0 2 1272 547 283 86 24 chr15 90154476 90154541 -13340433 - RMER15 LTR ERVL -54 521 455 2 1272 450 0 0 0 chr15 90154541 90154591 -13340383 + (TTA)n Simple_repeat Simple_repeat 2 51 0 2 1272 547 283 86 24 chr15 90154591 90154735 -13340239 - RMER15 LTR ERVL -121 454 301 2 1272 941 82 0 82 chr15 90154944 90155090 -13339884 + B1_Mm SINE Alu 5 138 -9 2 1272 2627 73 57 20 chr15 90155440 90155846 -13339128 - L1_Mur1 LINE L1 -399 5487 5067 2 1272 1101 75 122 11 chr15 90155847 90156035 -13338939 + Lx3_Mus LINE L1 6793 7001 -8 2 1272 807 57 140 21 chr15 90156737 90156880 -13338094 - L1Md_F2 LINE L1 -12 6570 6411 2 1272 357 200 47 38 chr15 90157113 90157278 -13337696 + L1MB7 LINE L1 5731 5896 -282 2 1272 253 184 120 46 chr15 90159588 90159696 -13335278 + L1ME3A LINE L1 5312 5427 -737 2 1272 385 301 150 50 chr15 90160093 90160373 -13334601 + L1ME3A LINE L1 5852 6159 -14 2 1272 630 198 0 0 chr15 90160547 90160719 -13334255 + (CA)n Simple_repeat Simple_repeat 2 173 0 2 1272 350 242 6 0 chr15 90160730 90160891 -13334083 + (CA)n Simple_repeat Simple_repeat 1 162 0 2 1272 329 138 29 58 chr15 90160956 90161025 -13333949 + HAL1-3A_ME LINE L1 1975 2041 -817 2 1272 263 291 139 20 chr15 90161039 90161334 -13333640 + L1MEg LINE L1 995 1324 -4760 2 1272 1163 85 48 12 chr15 90162379 90162546 -13332428 - B2_Mm2 SINE B2 -8 187 15 2 1272 283 312 32 21 chr15 90163108 90163203 -13331771 + PB1D10 SINE Alu 6 101 -16 2 1272 213 94 0 0 chr15 90163973 90164005 -13330969 + (CAG)n Simple_repeat Simple_repeat 1 32 0 2 1272 498 75 0 0 chr15 90164581 90164648 -13330326 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1272 224 346 0 0 chr15 90167722 90167803 -13327171 + ID4_ SINE ID 2 82 -1 2 1272 2285 242 55 37 chr15 90167826 90168896 -13326078 - Lx7 LINE L1 -1486 6210 5111 2 1272 2478 68 0 26 chr15 90168896 90169244 -13325730 + RLTR8 LTR ERVK 1 339 -26 2 1272 1677 266 33 91 chr15 90169261 90169934 -13325040 + Lx7 LINE L1 6702 7335 -361 2 1272 186 71 0 0 chr15 90170006 90170034 -13324940 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 2 1272 21 0 0 0 chr15 90170269 90170290 -13324684 + AT_rich Low_complexity Low_complexity 1 21 0 2 1272 22 80 0 0 chr15 90171228 90171278 -13323696 + AT_rich Low_complexity Low_complexity 1 50 0 2 1272 257 291 70 35 chr15 90171307 90171421 -13323553 - MIR SINE MIR -62 200 83 2 1272 1007 255 119 26 chr15 90171555 90171857 -13323117 - MTD LTR MaLR -89 330 1 2 1272 438 270 141 16 chr15 90172104 90172232 -13322742 + B1F2 SINE Alu 6 149 0 2 1272 1065 89 12 6 chr15 90172236 90172405 -13322569 + (GGAA)n Simple_repeat Simple_repeat 3 172 0 2 1272 448 317 136 50 chr15 90172672 90172969 -13322005 + MLT1A0 LTR MaLR 54 362 -3 2 1272 2820 194 25 2 chr15 90174778 90175300 -13319674 + RMER5 LTR ERV1 1 534 0 2 1272 213 121 0 0 chr15 90175784 90175817 -13319157 + (GGGA)n Simple_repeat Simple_repeat 4 36 0 2 1272 783 63 0 23 chr15 90176169 90176299 -13318675 + (CCA)n Simple_repeat Simple_repeat 1 127 0 2 1273 180 0 0 0 chr15 90177709 90177729 -13317245 + (CG)n Simple_repeat Simple_repeat 2 21 0 2 1273 234 0 0 0 chr15 90177729 90177754 -13317220 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1273 366 23 0 0 chr15 90177754 90177796 -13317178 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 1273 252 218 36 18 chr15 90178629 90178685 -13316289 + RSINE1 SINE B4 6 62 -103 2 1273 1604 244 60 16 chr15 90178694 90179064 -13315910 - MTD LTR MaLR -9 410 25 2 1273 564 95 0 0 chr15 90179223 90179307 -13315667 + (CA)n Simple_repeat Simple_repeat 1 84 0 2 1273 1154 69 7 0 chr15 90179605 90179750 -13315224 + B1_Mus2 SINE Alu 1 146 -1 2 1273 238 196 0 38 chr15 90179977 90180030 -13314944 + MT2B LTR ERVL 79 129 -472 2 1273 487 216 15 25 chr15 90180031 90180161 -13314813 - MT2B LTR ERVL -366 127 1 2 1273 198 209 0 0 chr15 90180429 90180472 -13314502 + CT-rich Low_complexity Low_complexity 2 44 0 2 1273 1601 239 6 6 chr15 90180491 90180828 -13314146 - Lx5 LINE L1 -180 6870 6534 2 1273 426 303 0 0 chr15 90180972 90181081 -13313893 + MLT1B LTR MaLR 261 369 -21 2 1273 229 354 35 47 chr15 90182914 90183083 -13311891 - MIRb SINE MIR -17 251 85 2 1273 3142 54 23 0 chr15 90183769 90184156 -13310818 - MTA_Mm LTR MaLR 0 396 1 2 1273 288 189 15 15 chr15 90184505 90184641 -13310333 + (TG)n Simple_repeat Simple_repeat 1 136 0 2 1273 228 232 0 0 chr15 90184649 90184705 -13310269 + CT-rich Low_complexity Low_complexity 1 56 0 2 1273 389 158 135 21 chr15 90185485 90185607 -13309367 + Lx7 LINE L1 7567 7692 -4 2 1273 346 136 0 43 chr15 90185608 90185677 -13309297 + L1_Rod LINE L1 602 667 -6505 2 1273 252 122 0 0 chr15 90185814 90185855 -13309119 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 2 1273 1630 191 46 67 chr15 90186307 90186695 -13308279 - ORR1C2 LTR MaLR -2 382 3 2 1273 303 255 108 0 chr15 90187436 90187538 -13307436 - Lx8 LINE L1 -268 7205 7093 2 1273 1610 217 45 16 chr15 90189306 90189685 -13305289 + Lx6 LINE L1 7045 7434 -26 2 1273 261 0 0 0 chr15 90190021 90190050 -13304924 + (A)n Simple_repeat Simple_repeat 1 29 0 2 1273 393 149 0 0 chr15 90190735 90190802 -13304172 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1273 325 349 15 15 chr15 90190811 90190945 -13304029 - RMER12 LTR ERVK -472 850 717 2 1273 280 242 107 39 chr15 90191528 90191631 -13303343 + RLTR19-int LTR ERVK 780 889 -5248 2 1273 408 40 0 0 chr15 90191778 90191828 -13303146 + (GAAA)n Simple_repeat Simple_repeat 3 52 0 2 1273 260 206 80 27 chr15 90191900 90191975 -13302999 + MTC-int LTR MaLR 964 1042 -216 3 1273 253 319 27 77 chr15 90192010 90192193 -13302781 + MTC-int LTR MaLR 1042 1215 -43 3 1273 294 237 10 31 chr15 90192379 90192475 -13302499 + RLTR19-int LTR ERVK 1871 1964 -3558 2 1273 1104 245 105 68 chr15 90192531 90192999 -13301975 + RLTR19-int LTR ERVK 2705 3189 -2948 2 1273 2941 169 52 120 chr15 90193124 90194047 -13300927 + RLTR19-int LTR ERVK 3459 4318 -1819 2 1273 594 151 0 0 chr15 90194120 90194226 -13300748 + GA-rich Low_complexity Low_complexity 4 109 0 3 1273 229 262 0 44 chr15 90194492 90194605 -13300369 - Lx7 LINE L1 -1747 5897 5790 3 1273 976 283 135 21 chr15 90194679 90194772 -13300202 - Lx7 LINE L1 -84 5796 5703 3 1273 195 42 0 0 chr15 90194772 90194796 -13300178 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3 1273 999 90 0 7 chr15 90194796 90194931 -13300043 - B1_Mus2 SINE Alu -12 135 2 3 1273 976 283 135 21 chr15 90194931 90194964 -13300010 - Lx7 LINE L1 -178 5702 5670 3 1273 1423 193 85 61 chr15 90194964 90195339 -13299635 - ORR1C2 LTR MaLR 0 384 1 3 1273 976 283 135 21 chr15 90195339 90195921 -13299053 - Lx7 LINE L1 -211 5669 5007 3 1273 1045 264 23 65 chr15 90196033 90196287 -13298687 + Lx8 LINE L1 6559 6799 -674 3 1273 830 276 93 9 chr15 90196287 90196630 -13298344 + ORR1D1 LTR MaLR 1 372 -2 3 1273 1045 264 23 65 chr15 90196630 90196728 -13298246 + Lx8 LINE L1 6800 6896 -577 3 1273 550 327 21 50 chr15 90196722 90197005 -13297969 + Lx8 LINE L1 7046 7320 -153 3 1273 582 154 15 100 chr15 90197375 90197505 -13297469 + ORR1C2 LTR MaLR 1 119 -265 3 1273 430 228 78 10 chr15 90197501 90197603 -13297371 + B1_Mur1 SINE Alu 41 149 0 3 1273 967 198 18 36 chr15 90197756 90197976 -13296998 - B3 SINE B2 0 216 1 3 1273 351 335 81 0 chr15 90198073 90198246 -13296728 + HAL1 LINE L1 1594 1780 -727 3 1273 230 247 151 58 chr15 90198421 90198507 -13296467 + LTR48 LTR ERV1 64 157 -630 3 1273 384 40 0 0 chr15 90198511 90198561 -13296413 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 1273 183 42 0 0 chr15 90198755 90198779 -13296195 + (TTTAA)n Simple_repeat Simple_repeat 2 25 0 3 1273 327 25 0 0 chr15 90198913 90198953 -13296021 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1273 2873 63 0 11 chr15 90198959 90199341 -13295633 - L1Md_F2 LINE L1 -12 6570 6193 3 1273 189 0 0 0 chr15 90199341 90199362 -13295612 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 1273 802 172 0 15 chr15 90199612 90199748 -13295226 + B1_Mur1 SINE Alu 5 138 -11 3 1273 254 148 19 0 chr15 90199919 90199973 -13295001 + GA-rich Low_complexity Low_complexity 1 55 0 3 1273 691 67 29 0 chr15 90199976 90200081 -13294893 + (GGAA)n Simple_repeat Simple_repeat 2 109 0 3 1273 1622 251 125 43 chr15 90201232 90201889 -13293085 - Lx7 LINE L1 -203 7493 6783 3 1273 1764 143 108 7 chr15 90201909 90202205 -13292769 - ORR1B1 LTR MaLR -63 331 6 3 1273 2183 244 67 16 chr15 90202214 90202248 -13292726 - Lx7 LINE L1 -919 6777 6744 3 1273 189 0 0 0 chr15 90202248 90202269 -13292705 + (TTTTA)n Simple_repeat Simple_repeat 3 23 0 3 1273 2183 244 67 16 chr15 90202269 90202372 -13292602 - Lx7 LINE L1 -953 6743 6627 3 1273 3258 36 10 0 chr15 90202372 90202763 -13292211 + MTA_Mm LTR MaLR 1 395 -1 3 1273 2183 244 67 16 chr15 90202763 90203232 -13291742 - Lx7 LINE L1 -1070 6626 6140 3 1273 858 225 0 16 chr15 90203229 90203419 -13291555 - Lx7 LINE L1 -163 5717 5531 3 1273 6071 200 114 13 chr15 90203484 90203929 -13291045 - Lx7 LINE L1 -811 5069 4625 3 1273 324 0 0 0 chr15 90203929 90203965 -13291009 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1273 6071 200 114 13 chr15 90203965 90205186 -13289788 - Lx7 LINE L1 -1256 4624 3234 3 1273 573 15 0 0 chr15 90205250 90205316 -13289658 + (TG)n Simple_repeat Simple_repeat 2 67 0 3 1273 1017 133 202 0 chr15 90206172 90206360 -13288614 - URR1A DNA MER1_type 0 226 1 3 1273 3046 84 2 12 chr15 90207237 90207645 -13287329 - MTB_Mm LTR MaLR -3 404 1 3 1273 539 167 7 0 chr15 90208178 90208316 -13286658 + CT-rich Low_complexity Low_complexity 2 140 0 3 1273 1140 96 0 0 chr15 90208319 90208496 -13286478 + (TC)n Simple_repeat Simple_repeat 2 178 0 3 1273 39562 4 0 0 chr15 90208814 90215136 -13279838 - L1Md_A LINE L1 0 6582 260 3 1273 650 94 0 0 chr15 90215547 90215643 -13279331 - L1_Mus2 LINE L1 -1 6565 6470 3 1273 448 201 59 171 chr15 90215741 90215963 -13279011 - B3A SINE B2 0 198 2 3 1273 261 284 66 76 chr15 90216791 90216989 -13277985 - L1MC5 LINE L1 -1048 6913 6718 3 1273 249 318 0 0 chr15 90217559 90217622 -13277352 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1273 398 159 0 55 chr15 90218317 90218390 -13276584 + tRNA-Gly-GGA tRNA tRNA 4 72 -3 3 1273 562 172 71 174 chr15 90218403 90218558 -13276416 + B1_Mur1 SINE Alu 1 139 -10 3 1273 583 271 157 53 chr15 90218566 90218960 -13276014 + Lx9 LINE L1 6995 7429 -215 3 1273 237 119 0 0 chr15 90219008 90219050 -13275924 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1273 863 189 17 22 chr15 90219169 90219348 -13275626 - B2_Mm2 SINE B2 -16 179 2 3 1273 1092 76 7 7 chr15 90219377 90219523 -13275451 - B1_Mus1 SINE Alu -2 146 1 3 1273 298 244 36 24 chr15 90219618 90219702 -13275272 + MTEa LTR MaLR 293 377 -2 3 1273 254 143 0 20 chr15 90219708 90219758 -13275216 + (TATATG)n Simple_repeat Simple_repeat 4 52 0 3 1273 665 118 9 0 chr15 90219758 90219868 -13275106 + (CA)n Simple_repeat Simple_repeat 2 112 0 3 1273 297 277 98 25 chr15 90220609 90220731 -13274243 + MIRb SINE MIR 68 198 -70 3 1273 351 0 0 0 chr15 90220731 90220770 -13274204 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1273 613 197 14 35 chr15 90220804 90220818 -13274156 - B1_Mus1 SINE Alu -7 141 129 3 1273 186 71 0 0 chr15 90220818 90220846 -13274128 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 3 1273 613 197 14 35 chr15 90220846 90220973 -13274001 - B1_Mus1 SINE Alu -20 128 3 3 1273 201 184 26 0 chr15 90221389 90221427 -13273547 + (TATATG)n Simple_repeat Simple_repeat 6 44 0 3 1273 230 236 0 40 chr15 90223228 90223303 -13271671 + A-rich Low_complexity Low_complexity 2 73 0 3 1273 396 0 0 0 chr15 90223449 90223493 -13271481 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 3 1273 223 62 40 40 chr15 90223979 90224029 -13270945 + (TTTTTG)n Simple_repeat Simple_repeat 2 51 0 3 1273 267 31 0 0 chr15 90224041 90224073 -13270901 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1273 411 92 0 0 chr15 90224112 90224177 -13270797 + (TCTG)n Simple_repeat Simple_repeat 2 66 0 3 1273 355 296 155 0 chr15 90224178 90224320 -13270654 - B3A SINE B2 -20 178 15 3 1273 644 292 76 78 chr15 90224791 90225073 -13269901 + MER31B LTR ERV1 9 311 -155 3 1273 2044 165 11 11 chr15 90225073 90225440 -13269534 + ORR1B2 LTR MaLR 1 367 0 3 1273 644 292 76 78 chr15 90225440 90225606 -13269368 + MER31B LTR ERV1 312 456 -10 3 1273 437 300 53 79 chr15 90225783 90226041 -13268933 + Lx8 LINE L1 2437 2705 -3175 3 1273 568 205 30 59 chr15 90226041 90226176 -13268798 + B1_Mur2 SINE Alu 1 131 -18 3 1273 437 300 53 79 chr15 90226176 90226311 -13268663 + Lx8 LINE L1 2706 2820 -3060 3 1273 361 254 31 16 chr15 90226313 90226441 -13268533 + Lx8 LINE L1 3143 3272 -2608 3 1273 477 0 0 0 chr15 90226479 90226532 -13268442 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1273 189 0 0 0 chr15 90226532 90226552 -13268422 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 1273 1779 277 179 38 chr15 90226560 90227493 -13267481 + Lx8 LINE L1 4620 5706 -1767 3 1273 843 268 21 121 chr15 90227493 90227913 -13267061 - MTE2a LTR MaLR -1 378 1 3 1273 1779 318 109 25 chr15 90227913 90228183 -13266791 + Lx8 LINE L1 5707 6008 -1465 3 1273 3314 166 75 28 chr15 90228183 90228326 -13266648 + RLTR19B LTR ERVK 4 142 -573 3 1273 360 0 0 0 chr15 90228326 90228366 -13266608 + (TCCTG)n Simple_repeat Simple_repeat 1 40 0 3 1273 3314 166 75 28 chr15 90228366 90228902 -13266072 + RLTR19B LTR ERVK 143 714 -1 3 1273 1779 318 109 25 chr15 90228902 90229831 -13265143 + Lx8 LINE L1 6009 7014 -459 3 1273 893 238 64 31 chr15 90229866 90230321 -13264653 + L1_Rod LINE L1 2847 3316 -2531 3 1273 1423 80 0 5 chr15 90230323 90230511 -13264463 - B2_Mm2 SINE B2 -8 187 1 3 1273 24 0 0 0 chr15 90230512 90230536 -13264438 + AT_rich Low_complexity Low_complexity 1 24 0 3 1273 212 342 92 42 chr15 90231259 90231378 -13263596 - L2b LINE L2 -21 3354 3230 3 1273 1653 203 81 8 chr15 90232492 90232850 -13262124 + ORR1C2 LTR MaLR 1 384 0 3 1273 2050 136 34 164 chr15 90233006 90233500 -13261474 + RLTR23 LTR ERV1 1 430 0 3 1273 441 0 0 0 chr15 90233831 90233880 -13261094 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 1273 345 133 0 77 chr15 90233881 90233946 -13261028 + RLTR23 LTR ERV1 1 60 -370 3 1273 1677 137 4 0 chr15 90235041 90235312 -13259662 - Lx2 LINE L1 0 6997 6726 3 1273 1004 303 99 11 chr15 90235491 90235841 -13259133 + MTE2b LTR MaLR 3 377 -2 3 1273 619 281 20 54 chr15 90236183 90236386 -13258588 + B3A SINE B2 3 198 0 3 1273 573 286 0 0 chr15 90237119 90237245 -13257729 + ID_B1 SINE B4 88 213 -11 3 1273 6807 124 27 73 chr15 90237376 90238688 -13256286 + MYSERV6-int LTR ERVK 874 2125 -6834 3 1273 1616 81 101 0 chr15 90238750 90239008 -13255966 + MYSERV6-int LTR ERVK 4711 4994 -3965 3 1273 252 212 151 76 chr15 90239008 90239099 -13255875 + B1_Mur4 SINE Alu 1 96 -24 3 1273 247 291 59 0 chr15 90239099 90239167 -13255807 + PB1D7 SINE Alu 1 71 -49 3 1273 3203 154 47 55 chr15 90239167 90239542 -13255432 + MYSERV6-int LTR ERVK 6363 6733 -2226 3 1273 2315 161 66 11 chr15 90239542 90240014 -13254960 + RLTR19 LTR ERVK 2 499 0 3 1273 3203 154 47 55 chr15 90240014 90240345 -13254629 + MYSERV6-int LTR ERVK 6734 7063 -1896 3 1273 2023 48 0 8 chr15 90240345 90240595 -13254379 - L1Md_F2 LINE L1 -12 6570 6323 3 1273 5474 45 0 7 chr15 90240721 90241394 -13253580 - L1Md_F2 LINE L1 0 6582 5915 3 1273 1235 145 15 15 chr15 90241394 90241653 -13253321 + MYSERV6-int LTR ERVK 7059 7317 -1642 3 1273 1370 184 54 57 chr15 90241851 90242202 -13252772 - RLTR19-int LTR ERVK -1767 4370 4021 3 1273 6499 45 24 1 chr15 90242254 90243104 -13251870 - L1Md_F2 LINE L1 -2 6580 5727 3 1273 710 214 7 14 chr15 90243139 90243281 -13251693 - B1_Mur1 SINE Alu -8 141 1 3 1273 439 277 58 14 chr15 90244328 90244554 -13250420 - Lx7 LINE L1 -1711 5985 5752 3 1273 11386 5 0 0 chr15 90244876 90246213 -13248761 + L1Md_A LINE L1 4250 5586 -297 3 1273 9093 1 0 0 chr15 90246213 90247209 -13247765 + L1Md_A LINE L1 5587 6582 0 3 1273 1023 164 191 0 chr15 90247374 90247563 -13247411 - URR1B DNA MER1_type 0 225 1 3 1273 324 0 0 0 chr15 90248219 90248255 -13246719 + (TC)n Simple_repeat Simple_repeat 1 36 0 3 1273 949 308 97 20 chr15 90248287 90248741 -13246233 - RMER5 LTR ERV1 -13 521 33 3 1273 180 0 0 0 chr15 90249513 90249533 -13245441 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 1273 21 36 0 0 chr15 90249785 90249813 -13245161 + AT_rich Low_complexity Low_complexity 1 28 0 3 1273 967 65 0 0 chr15 90249813 90249937 -13245037 - B1_Mus2 SINE Alu 0 147 24 3 1273 619 259 42 22 chr15 90249940 90250150 -13244824 - B3A SINE B2 -2 214 2 3 1273 216 0 0 0 chr15 90250439 90250463 -13244511 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1273 2836 199 41 78 chr15 90251138 90251914 -13243060 + RMER1B Other Other 1 1066 0 3 1273 25 0 0 0 chr15 90251972 90251997 -13242977 + AT_rich Low_complexity Low_complexity 1 25 0 3 1273 357 174 90 80 chr15 90254882 90254981 -13239993 - RMER5 LTR ERV1 -139 395 296 3 1273 744 241 52 167 chr15 90254981 90255183 -13239791 + MTD LTR MaLR 2 206 -213 4 1273 729 194 0 0 chr15 90255183 90255312 -13239662 + B1_Mus1 SINE Alu 2 130 -18 4 1273 744 241 52 167 chr15 90255312 90255433 -13239541 + MTD LTR MaLR 207 288 -131 4 1273 407 299 84 66 chr15 90255500 90255726 -13239248 - RMER5 LTR ERV1 -302 232 3 3 1273 351 0 0 0 chr15 90255757 90255796 -13239178 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1273 762 106 0 0 chr15 90257070 90257202 -13237772 + (GA)n Simple_repeat Simple_repeat 1 132 0 4 1273 655 324 123 8 chr15 90259147 90259408 -13235566 - MTE2b LTR MaLR -88 291 1 4 1273 1574 233 29 29 chr15 90259462 90259838 -13235136 + MTD LTR MaLR 33 408 -11 4 1273 321 359 25 25 chr15 90259823 90259943 -13235031 - ID_B1 SINE B4 -96 128 9 4 1273 29 28 0 0 chr15 90260336 90260372 -13234602 + AT_rich Low_complexity Low_complexity 1 36 0 4 1273 258 196 118 11 chr15 90260466 90260559 -13234415 - L1MA8 LINE L1 -145 6146 6044 4 1273 310 355 22 7 chr15 90261192 90261328 -13233646 + MIRb SINE MIR 45 182 -86 4 1273 369 295 25 69 chr15 90262824 90263028 -13231946 + RMER30 DNA MER1_type 5 199 -3 4 1273 825 251 117 15 chr15 90263719 90264043 -13230931 + Lx8 LINE L1 6825 7181 -292 4 1273 3537 163 24 9 chr15 90264099 90264735 -13230239 - Lx4B LINE L1 -4 7054 6410 4 1273 350 202 112 0 chr15 90264799 90264888 -13230086 - MTD LTR MaLR -1 418 320 4 1273 1172 188 10 5 chr15 90265150 90265358 -13229616 - URR1B DNA MER1_type -16 209 1 4 1273 525 131 0 0 chr15 90265420 90265504 -13229470 + (TTTC)n Simple_repeat Simple_repeat 4 87 0 4 1273 1116 89 0 0 chr15 90267016 90267162 -13227812 - B1_Mus2 SINE Alu 0 147 2 4 1273 22 99 0 0 chr15 90267994 90268065 -13226909 + AT_rich Low_complexity Low_complexity 1 71 0 4 1273 1362 82 0 0 chr15 90268142 90268779 -13226195 + (TG)n Simple_repeat Simple_repeat 1 637 0 4 1273 234 292 0 0 chr15 90268795 90268860 -13226114 + Tigger9a DNA Tigger 612 676 -56 4 1273 802 295 34 70 chr15 90269447 90270132 -13224842 - RLTR18 LTR ERVK -10 502 1 4 1273 267 31 0 0 chr15 90270197 90270229 -13224745 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1273 492 18 0 0 chr15 90270229 90270285 -13224689 + (GA)n Simple_repeat Simple_repeat 1 57 0 4 1273 495 0 0 0 chr15 90270917 90270972 -13224002 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1273 270 0 0 0 chr15 90271530 90271560 -13223414 + (TC)n Simple_repeat Simple_repeat 1 30 0 4 1273 892 231 40 5 chr15 90272502 90272702 -13222272 - B3 SINE B2 0 216 10 4 1273 380 55 0 18 chr15 90272750 90272806 -13222168 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 4 1273 378 0 0 0 chr15 90273162 90273204 -13221770 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1273 869 24 0 16 chr15 90274295 90274420 -13220554 - L1Md_F3 LINE L1 -14 6570 6448 4 1273 429 260 36 18 chr15 90275073 90275197 -13219777 + B1_Mur2 SINE Alu 2 127 -22 4 1273 514 182 7 33 chr15 90275207 90275360 -13219614 + GA-rich Low_complexity Low_complexity 1 149 0 4 1273 362 250 65 74 chr15 90275813 90275921 -13219053 + PB1D10 SINE Alu 11 117 0 4 1273 180 97 0 0 chr15 90276131 90276162 -13218812 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1273 1162 68 0 0 chr15 90276175 90276322 -13218652 - B1_Mus2 SINE Alu 0 147 1 4 1273 3680 157 68 49 chr15 90276580 90277377 -13217597 + RLTR40 LTR ERVK 1 812 -5 4 1273 23 78 0 0 chr15 90277507 90277558 -13217416 + AT_rich Low_complexity Low_complexity 1 51 0 4 1273 303 226 39 34 chr15 90277790 90277969 -13217005 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 4 1273 318 145 54 39 chr15 90277791 90277920 -13217054 + (TA)n Simple_repeat Simple_repeat 2 132 0 4 1273 201 197 28 14 chr15 90277975 90278047 -13216927 + (TA)n Simple_repeat Simple_repeat 2 74 0 4 1273 30 27 0 0 chr15 90278156 90278193 -13216781 + AT_rich Low_complexity Low_complexity 1 37 0 4 1273 229 203 29 14 chr15 90278439 90278509 -13216465 + (TATAA)n Simple_repeat Simple_repeat 5 75 0 4 1273 294 262 42 18 chr15 90280130 90280297 -13214677 + (CAGAGA)n Simple_repeat Simple_repeat 6 176 0 4 1273 298 336 70 8 chr15 90280302 90280431 -13214543 - MLT1J LTR MaLR -336 176 40 4 1273 926 241 30 0 chr15 90280439 90280642 -13214332 + B3 SINE B2 2 210 -6 4 1273 21 0 0 0 chr15 90282639 90282660 -13212314 + AT_rich Low_complexity Low_complexity 1 21 0 4 1273 790 162 215 5 chr15 90283017 90283203 -13211771 + URR1B DNA MER1_type 1 225 0 4 1273 238 244 43 32 chr15 90283874 90283967 -13211007 + L1MB1 LINE L1 6074 6167 -1 4 1273 27 62 0 0 chr15 90283967 90284015 -13210959 + AT_rich Low_complexity Low_complexity 1 48 0 4 1273 661 348 11 0 chr15 90284539 90284726 -13210248 - ID_B1 SINE B4 -34 190 2 4 1273 462 272 54 35 chr15 90285049 90285308 -13209666 + L1M4c LINE L1 1963 2226 -4158 4 1273 700 226 146 19 chr15 90285315 90285469 -13209505 + ORR1B1 LTR MaLR 1 159 -235 4 1273 4987 33 5 8 chr15 90285469 90286073 -13208901 - L1Md_F3 LINE L1 -1 6583 5982 4 1273 700 234 186 24 chr15 90286073 90286221 -13208753 + ORR1B1 LTR MaLR 160 352 -7 4 1273 384 343 69 46 chr15 90286361 90286578 -13208396 + MER47B DNA MER2_type 33 254 -164 4 1273 743 299 133 6 chr15 90286757 90287394 -13207580 + L1M4c LINE L1 2489 3206 -3176 4 1273 286 148 49 0 chr15 90287414 90287475 -13207499 + Lx9 LINE L1 7581 7644 0 4 1273 2884 55 3 29 chr15 90287496 90287871 -13207103 - RLTR10B2 LTR ERVK 0 365 1 4 1273 3473 39 0 0 chr15 90287880 90288293 -13206681 + L1Md_A LINE L1 6170 6582 0 4 1273 402 314 21 28 chr15 90288304 90288448 -13206526 + ID_B1 SINE B4 82 224 0 4 1273 511 291 77 17 chr15 90288449 90288683 -13206291 + L1M4c LINE L1 3274 3521 -2861 4 1273 584 217 42 28 chr15 90288950 90289092 -13205882 + B1F2 SINE Alu 5 148 -1 4 1273 314 133 150 62 chr15 90289094 90289174 -13205800 - MLT1A0 LTR MaLR -54 311 225 4 1273 600 268 58 0 chr15 90289334 90289539 -13205435 + Lx9 LINE L1 7288 7504 -140 4 1273 596 179 127 5 chr15 90289535 90289732 -13205242 + Lx9 LINE L1 7423 7643 -1 4 1273 21 0 0 0 chr15 90289742 90289763 -13205211 + AT_rich Low_complexity Low_complexity 1 21 0 4 1273 322 375 27 5 chr15 90289763 90289948 -13205026 - MLT1J-int LTR MaLR -671 716 528 4 1273 369 303 28 0 chr15 90290042 90290151 -13204823 + MLT1A1 LTR MaLR 15 126 -282 4 1273 340 292 8 34 chr15 90290177 90290294 -13204680 + MLT1A1 LTR MaLR 262 375 -33 4 1273 7605 133 36 1 chr15 90291366 90292697 -13202277 - Lx2B LINE L1 -2 6998 5551 4 1273 3981 148 29 3 chr15 90292700 90293429 -13201545 + Lx2B LINE L1 4776 5523 -354 4 1273 414 0 0 0 chr15 90294142 90294188 -13200786 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1273 2516 251 46 68 chr15 90294209 90295115 -13199859 - MTD-int LTR MaLR -463 795 2 4 1273 1011 258 16 16 chr15 90295116 90295360 -13199614 - MTD LTR MaLR 0 419 176 4 1273 2177 299 55 19 chr15 90295363 90296166 -13198808 - Lx8 LINE L1 -453 7020 6189 4 1273 563 267 41 58 chr15 90296180 90296351 -13198623 - ORR1E LTR MaLR -5 354 187 4 1273 336 24 0 0 chr15 90296353 90296394 -13198580 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 1273 717 194 22 0 chr15 90296397 90296531 -13198443 - ORR1E LTR MaLR -218 141 5 4 1273 222 37 0 0 chr15 90296968 90296995 -13197979 + (TA)n Simple_repeat Simple_repeat 2 28 0 4 1273 1065 282 74 19 chr15 90297003 90297570 -13197404 - L1M2 LINE L1 -2192 3951 3354 4 1273 1104 73 0 0 chr15 90297759 90297909 -13197065 - L1_Mus2 LINE L1 0 6566 6417 4 1273 1919 141 26 67 chr15 90298117 90298460 -13196514 - ORR1A4 LTR MaLR 0 329 1 4 1273 309 26 0 0 chr15 90299963 90300001 -13194973 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1273 495 87 0 0 chr15 90300271 90300340 -13194634 + (TA)n Simple_repeat Simple_repeat 2 70 0 4 1273 961 254 38 21 chr15 90300341 90300578 -13194396 + B4A SINE B4 50 290 -2 4 1273 2388 50 63 0 chr15 90300628 90300946 -13194028 + ORR1A1 LTR MaLR 1 338 -8 4 1273 13513 58 18 4 chr15 90300950 90302717 -13192257 + ORR1A1-int LTR MaLR 1 1792 0 4 1273 2615 48 42 6 chr15 90302717 90303051 -13191923 + ORR1A1 LTR MaLR 1 346 0 4 1273 375 23 0 0 chr15 90303095 90303139 -13191835 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1273 761 199 29 0 chr15 90304104 90304240 -13190734 + B1_Mur1 SINE Alu 9 148 -1 4 1273 198 0 0 0 chr15 90304393 90304415 -13190559 + (TC)n Simple_repeat Simple_repeat 1 22 0 4 1273 232 184 20 0 chr15 90304864 90304913 -13190061 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1273 2039 20 20 0 chr15 90305423 90305671 -13189303 + L1Md_F3 LINE L1 6317 6569 -15 4 1273 1166 197 27 86 chr15 90305717 90306126 -13188848 - MTC-int LTR MaLR -791 467 17 4 1273 2443 160 30 2 chr15 90306141 90306548 -13188426 - MTC LTR MaLR -3 418 1 4 1273 964 252 86 14 chr15 90306841 90307191 -13187783 - MTEb LTR MaLR -4 375 1 4 1273 246 333 27 36 chr15 90307263 90307375 -13187599 + PB1D10 SINE Alu 1 111 -6 4 1273 201 241 0 0 chr15 90307422 90307476 -13187498 + GA-rich Low_complexity Low_complexity 3 56 0 4 1273 379 269 29 6 chr15 90307488 90307660 -13187314 + L1MEg LINE L1 1498 1673 -4411 4 1273 37 39 0 0 chr15 90307703 90307754 -13187220 + AT_rich Low_complexity Low_complexity 1 51 0 4 1273 238 246 49 0 chr15 90308054 90308115 -13186859 + MER53 DNA hAT 129 192 -1 4 159 2989 77 0 3 chr15 90308548 90308939 -13186035 - L1_Mus1 LINE L1 0 6567 6178 4 1274 1728 202 57 11 chr15 90309544 90309915 -13185059 - MTD LTR MaLR -31 388 1 4 1274 2413 131 5 33 chr15 90311464 90311883 -13183091 + MTB_Mm LTR MaLR 1 407 0 4 1274 1427 308 15 28 chr15 90312095 90312632 -13182342 - Lx9 LINE L1 -297 7347 6818 4 1274 503 237 147 0 chr15 90312802 90312958 -13182016 - Lx2B LINE L1 -10 6990 6812 4 1274 936 228 55 55 chr15 90312958 90313399 -13181575 + RMER2 LTR ERV1 1 540 -27 4 1274 251 100 0 24 chr15 90313416 90313457 -13181517 - Lx4B LINE L1 -147 6911 6872 4 1274 242 196 0 0 chr15 90313424 90313470 -13181504 - Lx3C LINE L1 -163 6813 6768 4 1274 24 0 0 0 chr15 90314281 90314305 -13180669 + AT_rich Low_complexity Low_complexity 1 24 0 4 1274 5314 223 32 57 chr15 90314605 90316091 -13178883 + Lx7 LINE L1 6199 7647 -49 4 1274 397 259 45 27 chr15 90319722 90319833 -13175141 - PB1D7 SINE Alu -7 113 1 4 1274 647 259 202 104 chr15 90319838 90320165 -13174809 + MTD LTR MaLR 9 367 -12 5 1274 231 36 0 0 chr15 90321162 90321190 -13173784 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1274 1232 34 0 0 chr15 90321200 90321347 -13173627 + B1_Mus2 SINE Alu 1 147 0 5 1274 23 0 0 0 chr15 90321746 90321769 -13173205 + AT_rich Low_complexity Low_complexity 1 23 0 5 1274 231 204 0 0 chr15 90321805 90321854 -13173120 + CT-rich Low_complexity Low_complexity 2 50 0 5 1274 1144 239 45 112 chr15 90322156 90322473 -13172501 + Lx7 LINE L1 7067 7367 -329 5 1274 288 0 0 0 chr15 90322473 90322505 -13172469 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1274 1144 239 45 112 chr15 90322505 90322658 -13172316 + Lx7 LINE L1 7368 7505 -191 5 1274 22 0 0 0 chr15 90323597 90323619 -13171355 + AT_rich Low_complexity Low_complexity 1 22 0 5 1274 234 261 34 14 chr15 90323979 90324071 -13170903 - MIRc SINE MIR -99 177 82 5 1274 237 132 0 0 chr15 90326619 90326657 -13168317 + (T)n Simple_repeat Simple_repeat 1 38 0 5 1274 551 245 91 0 chr15 90330825 90330968 -13164006 + RSINE1 SINE B4 2 157 -8 5 1274 390 21 0 0 chr15 90332200 90332247 -13162727 + (TTCC)n Simple_repeat Simple_repeat 2 48 0 5 1274 1013 55 0 127 chr15 90332305 90332462 -13162512 + B1_Mm SINE Alu 2 139 -8 5 1274 297 0 0 0 chr15 90332462 90332495 -13162479 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 5 1274 237 237 0 0 chr15 90332862 90332921 -13162053 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 1274 21 0 0 0 chr15 90333436 90333457 -13161517 + AT_rich Low_complexity Low_complexity 1 21 0 5 1274 834 106 0 0 chr15 90334588 90334711 -13160263 + (TTTC)n Simple_repeat Simple_repeat 4 126 0 5 1274 935 41 8 8 chr15 90334718 90334841 -13160133 - B1_Mus1 SINE Alu 0 148 26 5 1274 521 261 160 21 chr15 90334960 90334974 -13160000 - B3 SINE B2 0 216 204 5 1274 669 58 0 0 chr15 90334974 90335060 -13159914 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 5 1274 521 261 160 21 chr15 90335060 90335233 -13159741 - B3 SINE B2 -13 203 4 5 1274 297 0 0 0 chr15 90335695 90335728 -13159246 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 1274 408 313 44 15 chr15 90336381 90336585 -13158389 - ID_B1 SINE B4 -12 212 3 5 1274 315 0 0 0 chr15 90336697 90336732 -13158242 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 5 1274 1108 67 0 0 chr15 90336732 90336867 -13158107 - B1_Mus1 SINE Alu -13 135 1 5 1274 21 0 0 0 chr15 90337158 90337179 -13157795 + AT_rich Low_complexity Low_complexity 1 21 0 5 1274 667 300 136 25 chr15 90337407 90337650 -13157324 - B4A SINE B4 -21 271 2 5 1274 3191 189 62 15 chr15 90338809 90339726 -13155248 + Lx4B LINE L1 6023 6994 -6 5 1274 194 0 39 0 chr15 90340072 90340098 -13154876 + (CAA)n Simple_repeat Simple_repeat 1 27 0 5 1274 315 0 0 0 chr15 90340258 90340293 -13154681 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1274 2589 146 105 8 chr15 90340926 90341404 -13153570 + RLTR11A LTR ERVK 5 528 0 5 1274 262 313 78 45 chr15 90341422 90341576 -13153398 - MLT1F LTR MaLR -47 522 364 5 1274 295 263 126 0 chr15 90341583 90341678 -13153296 - MLT1F LTR MaLR -286 262 156 5 1274 188 349 81 35 chr15 90342011 90342097 -13152877 - MIR SINE MIR -160 102 13 5 1274 28 29 0 0 chr15 90342228 90342263 -13152711 + AT_rich Low_complexity Low_complexity 1 35 0 5 1274 1168 240 122 24 chr15 90342283 90342620 -13152354 + ORR1D2 LTR MaLR 1 370 0 5 1274 330 26 0 0 chr15 90342730 90342769 -13152205 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 1274 2056 277 36 65 chr15 90342812 90343530 -13151444 + Lx8 LINE L1 6549 7245 -228 5 1274 881 280 19 71 chr15 90343772 90344080 -13150894 - B4A SINE B4 0 292 1 5 1274 402 364 105 38 chr15 90345502 90345816 -13149158 + MLT1H1 LTR MaLR 10 344 -211 5 1274 222 62 0 0 chr15 90347043 90347075 -13147899 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 1274 426 281 78 31 chr15 90347085 90347276 -13147698 - L1M4 LINE L1 -468 5710 5511 5 1274 1479 129 76 32 chr15 90347422 90347750 -13147224 - RMER17A LTR ERVK 0 889 442 5 1274 1072 99 0 24 chr15 90347737 90347902 -13147072 - RMER17A LTR ERVK -590 161 1 5 1274 459 0 0 0 chr15 90347969 90348020 -13146954 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1274 516 261 78 0 chr15 90348020 90348135 -13146839 - RSINE1 SINE B4 -41 124 1 5 1274 330 175 28 46 chr15 90348359 90348467 -13146507 + T-rich Low_complexity Low_complexity 2 107 0 5 1274 339 291 101 0 chr15 90348571 90348719 -13146255 - L1M4 LINE L1 -1441 4705 4543 5 1274 647 295 51 17 chr15 90348829 90349243 -13145731 - L1M4 LINE L1 -1736 4410 3983 5 1274 943 97 0 0 chr15 90349274 90349418 -13145556 + L1_Mus2 LINE L1 6423 6566 0 5 1274 364 284 31 138 chr15 90349569 90349896 -13145078 - L1M4 LINE L1 -2379 3767 3476 5 1274 1051 205 24 5 chr15 90350414 90350620 -13144354 + MTC LTR MaLR 1 210 -211 5 1274 868 113 7 54 chr15 90350623 90350772 -13144202 + B1_Mus2 SINE Alu 4 145 -2 5 1274 1337 181 0 4 chr15 90350789 90351016 -13143958 + MTC LTR MaLR 196 421 0 5 1274 351 0 0 0 chr15 90351168 90351207 -13143767 + (CTG)n Simple_repeat Simple_repeat 3 41 0 5 1274 297 295 164 7 chr15 90351418 90351558 -13143416 + RSINE1 SINE B4 4 165 0 5 1274 932 169 22 5 chr15 90351733 90351917 -13143057 - B2_Mm2 SINE B2 -8 187 1 5 1274 229 256 125 23 chr15 90352061 90352149 -13142825 + LTR89 LTR ERVL? 614 710 -169 5 1274 321 26 0 0 chr15 90352846 90352884 -13142090 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1274 621 152 29 6 chr15 90352884 90353056 -13141918 + (TA)n Simple_repeat Simple_repeat 1 176 0 5 1274 202 255 43 0 chr15 90353133 90353180 -13141794 + polypyrimidine Low_complexity Low_complexity 4 52 0 5 1274 198 103 0 0 chr15 90353497 90353526 -13141448 + (TGG)n Simple_repeat Simple_repeat 3 31 0 5 1274 305 140 0 17 chr15 90353526 90353578 -13141396 + (CAT)n Simple_repeat Simple_repeat 1 52 0 5 1274 247 250 133 22 chr15 90354027 90354117 -13140857 + MIRc SINE MIR 5 104 -164 5 1274 611 292 98 27 chr15 90354752 90354977 -13139997 - B4A SINE B4 -50 242 2 5 1274 693 259 7 6 chr15 90355329 90355602 -13139372 + GA-rich Low_complexity Low_complexity 1 273 0 5 1274 1413 51 0 0 chr15 90355602 90355780 -13139194 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 5 1274 693 208 6 11 chr15 90355780 90355812 -13139162 + polypurine Low_complexity Low_complexity 148 179 0 5 1274 909 237 0 36 chr15 90357317 90357536 -13137438 + B3 SINE B2 1 211 -5 5 1274 184 311 46 46 chr15 90357537 90357645 -13137329 + L3 LINE CR1 2205 2312 -2177 5 1274 30718 89 10 23 chr15 90357936 90361926 -13133048 + L1Md_F2 LINE L1 249 4196 -1687 5 1274 387 0 0 0 chr15 90361926 90361969 -13133005 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 1274 30718 68 6 16 chr15 90361969 90363072 -13131902 + L1Md_F2 LINE L1 4197 5299 -584 5 1274 1209 43 0 0 chr15 90363072 90363212 -13131762 + B1_Mus1 SINE Alu 4 143 -5 5 1274 30718 68 6 16 chr15 90363212 90363545 -13131429 + L1Md_F2 LINE L1 5300 5584 -299 5 1274 7342 61 32 14 chr15 90363545 90364513 -13130461 + L1Md_F2 LINE L1 5587 6571 -11 5 1274 976 272 122 16 chr15 90364690 90365141 -13129833 - Lx9 LINE L1 -20 7624 7126 5 1274 717 45 0 0 chr15 90365141 90365230 -13129744 + (TTTC)n Simple_repeat Simple_repeat 2 90 0 5 1274 882 45 0 0 chr15 90365234 90365344 -13129630 - B1_Mus1 SINE Alu -7 141 32 5 1274 212 111 0 22 chr15 90365486 90365532 -13129442 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 5 1274 22 0 0 0 chr15 90367215 90367237 -13127737 + AT_rich Low_complexity Low_complexity 1 22 0 5 1274 773 220 70 65 chr15 90367254 90367468 -13127506 - B3 SINE B2 0 216 2 5 1274 414 0 0 0 chr15 90367871 90367917 -13127057 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1274 607 296 87 0 chr15 90368070 90368242 -13126732 - ID_B1 SINE B4 -36 188 2 5 1274 186 167 0 0 chr15 90368287 90368323 -13126651 + T-rich Low_complexity Low_complexity 1 36 0 5 1274 2468 49 0 0 chr15 90369000 90369305 -13125669 + L1_Mus1 LINE L1 6263 6567 0 5 1274 1631 176 131 70 chr15 90369613 90370010 -13124964 + MTC LTR MaLR 1 421 0 5 1274 304 165 11 23 chr15 90370420 90370507 -13124467 + (TATG)n Simple_repeat Simple_repeat 2 87 0 5 1274 497 44 15 0 chr15 90370556 90370624 -13124350 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 1274 351 0 0 0 chr15 90370726 90370765 -13124209 + (GA)n Simple_repeat Simple_repeat 2 40 0 5 1274 366 244 88 88 chr15 90372406 90372577 -13122397 + RLTR14 LTR ERV1 212 382 0 5 1274 350 365 36 79 chr15 90372577 90372854 -13122120 + RMER5 LTR ERV1 79 343 -191 5 1274 414 101 0 0 chr15 90372896 90372965 -13122009 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 1274 602 235 77 57 chr15 90373108 90373302 -13121672 + RMER5 LTR ERV1 329 526 -8 5 1274 517 257 109 7 chr15 90373306 90373443 -13121531 - B3A SINE B2 -42 156 6 5 1274 378 171 0 0 chr15 90373624 90373694 -13121280 + A-rich Low_complexity Low_complexity 1 70 0 5 1274 22 35 0 0 chr15 90374786 90374815 -13120159 + AT_rich Low_complexity Low_complexity 1 29 0 5 1274 665 208 6 0 chr15 90375037 90375205 -13119769 + (TA)n Simple_repeat Simple_repeat 1 169 0 5 1274 227 373 30 60 chr15 90375270 90375404 -13119570 + RMER15 LTR ERVL 423 552 -23 5 1274 240 35 0 0 chr15 90376475 90376504 -13118470 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1274 219 125 0 0 chr15 90376574 90376614 -13118360 + (CAAAA)n Simple_repeat Simple_repeat 3 42 0 5 1274 255 294 35 75 chr15 90376752 90376951 -13118023 + L1M4 LINE L1 329 519 -6023 5 1274 441 0 0 0 chr15 90377051 90377100 -13117874 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1274 542 242 121 0 chr15 90377102 90377234 -13117740 - B3A SINE B2 -46 152 5 5 1274 992 242 81 141 chr15 90378149 90378616 -13116358 - RLTR12B LTR ERVK -42 486 48 5 1274 316 231 165 0 chr15 90378869 90378960 -13116014 + PB1D7 SINE Alu 1 106 -14 5 1274 415 99 24 24 chr15 90378961 90379044 -13115930 + (CAGAGA)n Simple_repeat Simple_repeat 2 84 0 5 1274 201 211 0 0 chr15 90379384 90379441 -13115533 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1274 353 293 0 0 chr15 90379455 90379537 -13115437 - PB1D10 SINE Alu -2 115 34 5 1274 288 0 0 0 chr15 90379861 90379893 -13115081 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 5 1274 1069 247 93 34 chr15 90380801 90381179 -13113795 + Lx9 LINE L1 7238 7637 -7 5 1274 616 308 7 1 chr15 90381200 90381347 -13113627 + B3A SINE B2 2 148 -45 6 1274 399 56 0 0 chr15 90381347 90381401 -13113573 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1274 300 312 84 74 chr15 90381401 90381443 -13113531 + B2_Mm1t SINE B2 149 193 0 6 1274 486 0 0 0 chr15 90381663 90381717 -13113257 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 1274 848 47 219 0 chr15 90382006 90382134 -13112840 + B2_Mm1t SINE B2 1 156 -37 6 1274 387 0 0 0 chr15 90382134 90382177 -13112797 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 6 1274 1286 229 26 83 chr15 90382776 90383161 -13111813 + MTE2a LTR MaLR 17 379 0 6 1274 289 214 10 10 chr15 90385122 90385226 -13109748 + (TG)n Simple_repeat Simple_repeat 1 104 0 6 1274 358 367 88 27 chr15 90385259 90385522 -13109452 - B4A SINE B4 -8 284 6 6 1274 462 79 0 0 chr15 90385525 90385588 -13109386 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1274 317 119 0 0 chr15 90385675 90385734 -13109240 + L1Md_F2 LINE L1 6521 6579 -3 6 1274 185 371 49 110 chr15 90386247 90386492 -13108482 + L2b LINE L2 3118 3347 -28 6 1274 204 158 79 0 chr15 90386586 90386624 -13108350 + MIRb SINE MIR 221 261 -7 6 1274 330 274 0 0 chr15 90386966 90387079 -13107895 + (CA)n Simple_repeat Simple_repeat 2 114 0 6 1274 711 174 0 0 chr15 90387062 90387206 -13107768 + (TA)n Simple_repeat Simple_repeat 2 145 0 6 1274 243 241 92 46 chr15 90387832 90387919 -13107055 + MTEa LTR MaLR 258 348 -31 6 1274 1355 209 85 4 chr15 90388382 90388680 -13106294 + ORR1D2 LTR MaLR 44 401 -6 6 1274 300 53 0 0 chr15 90388714 90388752 -13106222 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 1274 270 101 0 9 chr15 90389342 90389403 -13105571 + L1_Mus4 LINE L1 6516 6636 0 6 1274 670 253 137 24 chr15 90391178 90391364 -13103610 + L1_Rod LINE L1 1398 1603 -4244 6 1274 552 65 0 0 chr15 90391364 90391441 -13103533 + (GAAA)n Simple_repeat Simple_repeat 4 80 0 6 1274 670 253 137 24 chr15 90391441 90391627 -13103347 + L1_Rod LINE L1 1604 1811 -4036 6 1274 2279 265 57 45 chr15 90392386 90393486 -13101488 + L1_Rod LINE L1 1796 2908 -2939 6 1274 22 56 0 0 chr15 90394145 90394181 -13100793 + AT_rich Low_complexity Low_complexity 1 36 0 6 1274 786 197 14 0 chr15 90395620 90395762 -13099212 - B1_Mur4 SINE Alu -6 144 1 6 1274 398 299 47 31 chr15 90395766 90395959 -13099015 + CYRA11_Mm Unknown Y-chromosome 149 344 -273 6 1274 1280 184 5 0 chr15 90395791 90396008 -13098966 - URR1B DNA MER1_type -6 219 2 6 1274 417 200 159 8 chr15 90396175 90396301 -13098673 - B1F SINE Alu 0 149 5 6 1274 612 217 71 21 chr15 90397336 90397477 -13097497 + B1_Mur1 SINE Alu 2 149 0 6 1274 26 30 0 0 chr15 90397853 90397886 -13097088 + AT_rich Low_complexity Low_complexity 1 33 0 6 1274 978 8 59 29 chr15 90398895 90399031 -13095943 - L1Md_F2 LINE L1 -12 6570 6431 6 1274 445 382 50 6 chr15 90399181 90399360 -13095614 - MER5A DNA MER1_type -1 188 2 6 1274 338 227 0 0 chr15 90399511 90399577 -13095397 + PB1D10 SINE Alu 42 107 -10 6 1274 270 0 0 0 chr15 90400084 90400114 -13094860 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1274 306 0 0 0 chr15 90400167 90400201 -13094773 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1274 219 145 159 16 chr15 90401736 90401799 -13093175 - MIRb SINE MIR -69 199 128 6 1274 391 138 20 40 chr15 90402894 90403017 -13091957 - B2_Mm2 SINE B2 0 195 46 6 1274 848 119 199 0 chr15 90403049 90403200 -13091774 - B2_Mm2 SINE B2 -14 181 1 6 1274 1627 325 63 55 chr15 90403669 90405454 -13089520 - Lx9 LINE L1 -134 7510 5602 6 1274 2209 167 12 19 chr15 90405494 90405915 -13089059 + MTC LTR MaLR 1 418 -3 6 1274 1927 259 91 21 chr15 90406011 90407020 -13087954 - Lx9 LINE L1 -1030 4817 3741 6 1274 1032 162 122 0 chr15 90407025 90407222 -13087752 + URR1A DNA MER1_type 6 226 0 6 1274 414 247 115 80 chr15 90407235 90407662 -13087312 - Lx9 LINE L1 -2113 3734 3293 6 1274 468 319 38 38 chr15 90407663 90407875 -13087099 + Charlie12 DNA MER1_type 1124 1335 -1538 6 1274 1838 297 25 34 chr15 90407921 90408573 -13086401 + Charlie12 DNA MER1_type 1469 2114 -759 6 1274 278 336 57 9 chr15 90408736 90408946 -13086028 + Lx7 LINE L1 610 829 -6899 6 1274 10603 215 76 77 chr15 90409369 90411988 -13082986 + Lx7 LINE L1 864 3476 -2404 6 1274 495 0 0 0 chr15 90411988 90412043 -13082931 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 6 1274 10603 211 80 73 chr15 90412043 90413569 -13081405 + Lx7 LINE L1 3477 5022 -858 6 1274 2269 250 86 18 chr15 90413572 90414829 -13080145 + Lx7 LINE L1 5321 6704 -992 6 1274 708 284 56 31 chr15 90414826 90415154 -13079820 + Lx7 LINE L1 7001 7335 -361 6 1274 237 297 39 116 chr15 90415019 90415278 -13079696 + RMER1C Other Other 1103 1341 -1 6 1274 414 114 0 0 chr15 90417078 90417157 -13077817 + (T)n Simple_repeat Simple_repeat 1 79 0 6 1274 397 318 76 0 chr15 90417160 90417292 -13077682 - ID_B1 SINE B4 0 224 83 6 1274 289 305 42 73 chr15 90418034 90418225 -13076749 - MLT1E1A LTR MaLR -16 664 480 6 1274 32 26 0 0 chr15 90418595 90418634 -13076340 + AT_rich Low_complexity Low_complexity 1 39 0 6 1274 596 42 0 0 chr15 90418815 90418887 -13076087 - L1Md_F2 LINE L1 -188 6394 6323 6 1274 1236 261 86 35 chr15 90419268 90419724 -13075250 + RMER5 LTR ERV1 16 494 -40 6 1274 1161 82 0 0 chr15 90419748 90419895 -13075079 - B1_Mus2 SINE Alu 0 147 1 6 1274 473 0 0 17 chr15 90419901 90419959 -13075015 + (TTTTG)n Simple_repeat Simple_repeat 1 57 0 6 1274 411 281 184 25 chr15 90420351 90420595 -13074379 + B4A SINE B4 2 284 -8 6 1274 342 0 0 0 chr15 90420628 90420666 -13074308 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1274 357 82 0 0 chr15 90421313 90421362 -13073612 + (TCCC)n Simple_repeat Simple_repeat 3 51 0 6 1274 1716 183 39 91 chr15 90421544 90421960 -13073014 + ORR1B1 LTR MaLR 1 394 0 6 1274 233 389 0 0 chr15 90422746 90422842 -13072132 + ID4 SINE ID 5 100 -52 6 1274 384 22 0 0 chr15 90423695 90423740 -13071234 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 6 1274 880 275 117 34 chr15 90424838 90425162 -13069812 - MTE2a LTR MaLR -1 378 28 6 1274 1644 189 7 116 chr15 90426400 90426813 -13068161 - ORR1D1 LTR MaLR -2 372 5 6 1274 213 175 0 0 chr15 90426972 90427012 -13067962 + C-rich Low_complexity Low_complexity 4 43 0 6 1274 23 0 0 0 chr15 90428049 90428072 -13066902 + AT_rich Low_complexity Low_complexity 1 23 0 6 1274 295 237 12 73 chr15 90430767 90430849 -13064125 - B1F SINE Alu -4 145 69 6 1274 249 247 0 99 chr15 90430818 90430899 -13064075 - B1F SINE Alu -21 128 56 6 1274 278 244 21 85 chr15 90430883 90430977 -13063997 - B1F SINE Alu -21 128 41 6 1274 257 237 237 0 chr15 90431736 90431854 -13063120 + RMER15 LTR ERVL 408 553 -22 6 1274 256 247 55 0 chr15 90434764 90434837 -13060137 - MIR SINE MIR -76 186 110 6 1274 348 24 0 0 chr15 90434924 90434965 -13060009 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1274 247 356 167 0 chr15 90435517 90435649 -13059325 + RSINE1 SINE B4 3 156 -9 6 1274 186 43 0 0 chr15 90435667 90435690 -13059284 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 1274 301 232 31 125 chr15 90435918 90436046 -13058928 + MIR SINE MIR 119 234 -28 6 1274 26 30 0 0 chr15 90436822 90436855 -13058119 + AT_rich Low_complexity Low_complexity 1 33 0 6 1274 1351 278 33 53 chr15 90438082 90438720 -13056254 + Lx9 LINE L1 6972 7596 -48 6 1274 193 347 30 10 chr15 90439526 90439625 -13055349 + L2 LINE L2 2735 2835 -584 6 1275 934 33 8 0 chr15 90440977 90441097 -13053877 + B1_Mus1 SINE Alu 28 148 0 6 1275 224 30 0 29 chr15 90441097 90441131 -13053843 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 6 1275 514 236 11 125 chr15 90441823 90442007 -13052967 - RSINE1 SINE B4 0 165 3 6 1275 590 232 33 44 chr15 90442828 90443008 -13051966 - B3A SINE B2 -18 180 3 6 1275 506 325 138 25 chr15 90444579 90444898 -13050076 + ORR1E LTR MaLR 5 359 0 6 1275 258 279 0 0 chr15 90446439 90446507 -13048467 - ID4 SINE ID 0 83 16 6 1275 382 306 154 31 chr15 90446567 90446891 -13048083 + MTEa LTR MaLR 1 364 -15 6 1275 1237 166 16 58 chr15 90449037 90449280 -13045694 + Lx4B LINE L1 6826 7058 0 6 1275 309 109 0 0 chr15 90449367 90449413 -13045561 + (CATA)n Simple_repeat Simple_repeat 2 47 0 6 1275 258 156 0 0 chr15 90449671 90449716 -13045258 + GA-rich Low_complexity Low_complexity 1 45 0 6 1275 1235 80 11 0 chr15 90449723 90449899 -13045075 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 6 1275 227 286 26 18 chr15 90451276 90451390 -13043584 + ORR1C2 LTR MaLR 31 145 -239 6 1275 337 296 10 10 chr15 90451570 90451669 -13043305 + MTE-int LTR MaLR 29 127 -1453 6 1275 823 169 0 7 chr15 90451679 90451834 -13043140 + URR1B DNA MER1_type 72 225 0 6 1275 541 301 37 119 chr15 90451834 90452127 -13042847 + MTE-int LTR MaLR 121 389 -1191 6 1275 3105 148 118 59 chr15 90452132 90452334 -13042640 + RLTR22_Mur LTR ERVK 1 171 -1677 6 1275 471 35 0 0 chr15 90452334 90452391 -13042583 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 6 1275 3105 148 118 59 chr15 90452391 90452948 -13042026 + RLTR22_Mur LTR ERVK 172 805 -1043 6 1275 1827 120 24 10 chr15 90452970 90453264 -13041710 - Lx LINE L1 -1 6653 6356 6 1275 1020 38 0 0 chr15 90453265 90453398 -13041576 + B1_Mm SINE Alu 12 144 -3 6 1275 369 0 0 0 chr15 90453398 90453439 -13041535 + (TAAAA)n Simple_repeat Simple_repeat 2 42 0 6 1275 345 107 54 0 chr15 90453440 90453496 -13041478 - Lx LINE L1 -304 6350 6292 6 1275 720 170 41 35 chr15 90453513 90453684 -13041290 + RLTR22_Mur LTR ERVK 822 993 -855 6 1275 1150 170 63 8 chr15 90453852 90454089 -13040885 + RLTR22_Mur LTR ERVK 1599 1848 0 6 1275 428 220 81 18 chr15 90454262 90454373 -13040601 + PB1D9 SINE Alu 3 120 0 6 1275 235 319 33 0 chr15 90455010 90455101 -13039873 + L2 LINE L2 2007 2100 -1319 6 1275 228 226 81 23 chr15 90455435 90455521 -13039453 + MLT1A1 LTR MaLR 317 407 -1 6 1275 941 284 82 20 chr15 90456153 90456624 -13038350 - L1MA7 LINE L1 -385 5906 5375 6 1275 3462 49 30 20 chr15 90456782 90457220 -13037754 + L1_Mus1 LINE L1 6126 6567 0 6 1275 247 249 0 23 chr15 90457392 90457532 -13037442 + (CA)n Simple_repeat Simple_repeat 1 136 0 6 1275 207 100 0 0 chr15 90458334 90458364 -13036610 + (TC)n Simple_repeat Simple_repeat 2 31 0 6 1275 358 314 124 17 chr15 90458595 90458828 -13036146 + L1M3e LINE L1 7 264 -6766 6 1275 3000 24 0 0 chr15 90459664 90459996 -13034978 + IAPEY3_LTR LTR ERVK 1 332 0 6 1275 540 237 113 10 chr15 90460761 90460985 -13033989 - L1_Rod LINE L1 -4014 1833 1579 7 1275 1015 115 36 94 chr15 90461016 90461170 -13033804 - B2_Mm2 SINE B2 -14 181 27 7 1275 3288 36 2 2 chr15 90461170 90461564 -13033410 + L1Md_T LINE L1 6189 6582 0 7 1275 1015 115 36 94 chr15 90461564 90461601 -13033373 - B2_Mm2 SINE B2 -169 26 1 7 1275 660 118 51 19 chr15 90461681 90461837 -13033137 + CT-rich Low_complexity Low_complexity 3 163 0 7 1275 281 301 38 16 chr15 90461837 90462023 -13032951 - L1_Rod LINE L1 -4392 1455 1266 7 1275 211 239 0 0 chr15 90462268 90462314 -13032660 + T-rich Low_complexity Low_complexity 1 46 0 7 1275 282 331 118 0 chr15 90462512 90462617 -13032357 + MLT2C2 LTR ERVL 345 450 -83 7 1275 297 0 0 0 chr15 90462617 90462650 -13032324 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1275 284 185 38 0 chr15 90462650 90462713 -13032261 + MLT2C2 LTR ERVL 451 559 0 7 1275 1928 187 13 28 chr15 90463551 90463948 -13031026 + RMER3D-int LTR ERVK 2450 2840 -2 7 1275 1784 214 187 23 chr15 90463950 90464432 -13030542 + RLTR31_Mm LTR ERVK 1 561 0 7 1275 3168 56 2 17 chr15 90464462 90464864 -13030110 - MTA_Mm LTR MaLR 0 396 1 7 1275 430 131 0 48 chr15 90465377 90465481 -13029493 - L1Md_F2 LINE L1 0 6582 6484 7 1275 3026 97 2 0 chr15 90465481 90465885 -13029089 + L1_Mus1 LINE L1 5841 6245 -322 7 1275 342 0 0 0 chr15 90466004 90466042 -13028932 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1275 207 328 72 36 chr15 90466206 90466345 -13028629 - L3 LINE CR1 -547 3942 3799 7 1275 2214 87 60 17 chr15 90466898 90467250 -13027724 - IAPLTR1_Mm LTR ERVK 0 367 1 7 1275 56223 29 6 5 chr15 90467252 90473690 -13021284 - IAPEz-int LTR ERVK -2 6479 34 7 1275 2214 87 60 17 chr15 90473700 90474052 -13020922 - IAPLTR1_Mm LTR ERVK 0 367 1 7 1275 225 0 0 0 chr15 90474614 90474639 -13020335 + (T)n Simple_repeat Simple_repeat 1 25 0 7 1275 1212 103 11 6 chr15 90474918 90475094 -13019880 + B2_Mm1t SINE B2 3 179 -14 7 1275 426 36 0 0 chr15 90475107 90475162 -13019812 + B2_Mm2 SINE B2 47 101 -94 7 1275 180 0 0 0 chr15 90475186 90475206 -13019768 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 7 1275 22 0 0 0 chr15 90475216 90475238 -13019736 + AT_rich Low_complexity Low_complexity 1 22 0 7 1275 243 0 0 0 chr15 90475358 90475385 -13019589 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1275 234 91 0 0 chr15 90475755 90475788 -13019186 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 7 1275 210 273 25 25 chr15 90475826 90475905 -13019069 + B3A SINE B2 1 79 -119 7 1275 348 94 0 0 chr15 90476075 90476128 -13018846 + (CA)n Simple_repeat Simple_repeat 1 53 0 7 1275 553 325 56 20 chr15 90476771 90477022 -13017952 + MTE-int LTR MaLR 189 448 -1132 7 1275 248 371 69 23 chr15 90477532 90477750 -13017224 + MTE-int LTR MaLR 1070 1297 -283 7 1275 234 0 0 0 chr15 90479141 90479167 -13015807 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 1275 189 0 0 0 chr15 90479583 90479604 -13015370 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 7 1275 852 325 10 0 chr15 90480392 90480681 -13014293 + B4A SINE B4 1 292 0 7 1275 347 239 9 0 chr15 90480682 90480791 -13014183 + (CA)n Simple_repeat Simple_repeat 2 111 0 7 1275 25 31 0 0 chr15 90481382 90481414 -13013560 + AT_rich Low_complexity Low_complexity 1 32 0 7 1275 1132 69 7 0 chr15 90481718 90481863 -13013111 + B1_Mus2 SINE Alu 1 146 -1 7 1275 5702 222 55 55 chr15 90481868 90483614 -13011360 + Lx9 LINE L1 5781 7643 -1 7 1275 241 278 73 73 chr15 90483631 90483755 -13011219 - MIR SINE MIR -64 144 21 7 1275 559 219 6 6 chr15 90484005 90484184 -13010790 + (CA)n Simple_repeat Simple_repeat 1 179 0 7 1275 242 273 30 15 chr15 90484436 90484503 -13010471 + ID SINE ID 10 77 -147 7 1275 522 46 0 0 chr15 90484592 90484657 -13010317 + (TG)n Simple_repeat Simple_repeat 2 66 0 7 1275 614 208 12 25 chr15 90485556 90485719 -13009255 + RMER4B LTR ERVK 17 177 -408 7 1275 1008 111 0 0 chr15 90485758 90485938 -13009036 + (GA)n Simple_repeat Simple_repeat 1 180 0 7 1275 195 139 0 0 chr15 90485946 90485982 -13008992 + (GGA)n Simple_repeat Simple_repeat 3 38 0 7 1275 384 224 81 124 chr15 90486034 90486243 -13008731 + RMER19C LTR ERVK 389 588 -23 7 1275 210 324 0 56 chr15 90486291 90486399 -13008575 + RSINE1 SINE B4 3 104 -61 7 1275 225 0 0 0 chr15 90486406 90486431 -13008543 + (TC)n Simple_repeat Simple_repeat 1 25 0 7 1275 352 55 18 18 chr15 90486431 90486486 -13008488 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1275 1588 46 0 15 chr15 90487391 90487588 -13007386 - B2_Mm2 SINE B2 -1 194 1 7 1275 1352 180 134 23 chr15 90488444 90488786 -13006188 - MTD LTR MaLR -1 418 39 7 1275 248 260 57 64 chr15 90488917 90489057 -13005917 + MLT1D LTR MaLR 15 153 -352 7 1275 333 0 0 0 chr15 90489299 90489336 -13005638 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1275 915 168 150 20 chr15 90489615 90489815 -13005159 + URR1A DNA MER1_type 1 226 0 7 1275 259 240 173 39 chr15 90490868 90491024 -13003950 - RMER15 LTR ERVL -15 560 384 7 1275 318 324 68 23 chr15 90492784 90492961 -13002013 - L1MB7 LINE L1 -19 6165 5981 7 1275 387 289 185 50 chr15 90492966 90493409 -13001565 - L1MB7 LINE L1 -151 6028 5505 7 1275 192 133 33 16 chr15 90493742 90493803 -13001171 + (TA)n Simple_repeat Simple_repeat 2 63 0 7 1275 542 162 40 0 chr15 90493829 90493928 -13001046 - B1_Mur1 SINE Alu 0 149 47 7 1275 289 270 35 43 chr15 90494214 90494330 -13000644 + PB1D10 SINE Alu 1 115 -2 7 1275 391 239 32 49 chr15 90494836 90494959 -13000015 + B4A SINE B4 2 122 -170 7 1275 218 296 0 0 chr15 90494989 90495043 -12999931 + ID SINE ID 25 78 -146 7 1275 22 0 0 0 chr15 90496917 90496939 -12998035 + GC_rich Low_complexity Low_complexity 1 22 0 7 1275 504 176 0 10 chr15 90497863 90497966 -12997008 - Lx9 LINE L1 -2 7642 7541 7 1275 314 292 11 22 chr15 90499007 90499098 -12995876 + ID_B1 SINE B4 109 198 -26 7 1275 342 0 0 0 chr15 90500180 90500218 -12994756 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1275 508 311 29 18 chr15 90500617 90500787 -12994187 - B4A SINE B4 0 292 121 2 1275 1162 82 0 0 chr15 90501017 90501164 -12993810 + B1_Mus1 SINE Alu 1 147 -1 3 1275 2263 91 3 18 chr15 90501183 90501517 -12993457 + MusHAL1 LINE L1 938 1266 -1446 4 1275 7224 97 32 9 chr15 90501513 90502808 -12992166 + Lx LINE L1 5331 6653 -1 5 1275 231 296 21 74 chr15 90503339 90503434 -12991540 - MER117 DNA MER1_type -107 90 1 6 1275 306 281 46 92 chr15 90503700 90503853 -12991121 + RSINE1 SINE B4 1 146 -19 7 1275 333 0 0 0 chr15 90503869 90503906 -12991068 + (TAA)n Simple_repeat Simple_repeat 3 39 0 8 1275 274 262 70 23 chr15 90504088 90504174 -12990800 + PB1D10 SINE Alu 2 91 -29 9 1275 740 124 0 0 chr15 90505226 90505339 -12989635 + B1_Mus1 SINE Alu 1 113 -35 1 1275 857 236 17 5 chr15 90505707 90505929 -12989045 + Lx5 LINE L1 6269 6710 -750 1 1275 2069 139 144 21 chr15 90506956 90507330 -12987644 + MTC LTR MaLR 1 420 -1 1 1275 184 274 39 0 chr15 90507462 90507513 -12987461 - MIRb SINE MIR -182 86 34 1 1275 1189 186 0 5 chr15 90508370 90508592 -12986382 + URR1B DNA MER1_type 1 221 -4 1 1275 28 0 0 0 chr15 90509271 90509299 -12985675 + AT_rich Low_complexity Low_complexity 1 28 0 1 1275 241 162 0 56 chr15 90509781 90509853 -12985121 + G-rich Low_complexity Low_complexity 6 73 0 1 1275 715 323 144 20 chr15 90511119 90511675 -12983299 - L1ME1 LINE L1 -27 6152 5528 1 1275 530 103 11 0 chr15 90511764 90511851 -12983123 + (TA)n Simple_repeat Simple_repeat 2 89 0 1 1275 2139 102 48 3 chr15 90512955 90513268 -12981706 - ORR1A2 LTR MaLR 0 327 1 1 1275 4958 159 64 40 chr15 90513574 90513746 -12981228 - RLTR25A LTR ERVK 0 1103 892 2 1275 441 0 0 0 chr15 90513746 90513795 -12981179 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1275 4958 159 64 40 chr15 90513795 90514699 -12980275 - RLTR25A LTR ERVK -212 891 1 2 1275 243 0 0 0 chr15 90515121 90515148 -12979826 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2 1275 1099 58 0 21 chr15 90515148 90515290 -12979684 - B1_Mus1 SINE Alu -8 140 2 2 1275 603 252 8 0 chr15 90515300 90515427 -12979547 + B1_Mur1 SINE Alu 22 149 0 2 1275 360 148 0 0 chr15 90515435 90515496 -12979478 + (GA)n Simple_repeat Simple_repeat 1 61 0 2 1275 245 321 51 92 chr15 90516145 90516437 -12978537 - MLT1H2 LTR MaLR -9 480 201 2 1275 337 304 50 36 chr15 90517101 90517124 -12977850 + B1F1 SINE Alu 6 147 -2 2 1275 407 259 0 43 chr15 90517124 90517241 -12977733 + ID_B1 SINE B4 111 222 -2 2 1275 1313 198 112 11 chr15 90518529 90518877 -12976097 - MTD LTR MaLR 0 419 37 2 1275 182 62 31 0 chr15 90520545 90520577 -12974397 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 3 1275 518 289 14 0 chr15 90520771 90520913 -12974061 + B1F1 SINE Alu 1 144 -5 3 1275 993 329 22 10 chr15 90521076 90521352 -12973622 + L1M5 LINE L1 5333 5614 -565 3 1275 645 14 0 0 chr15 90521352 90521426 -12973548 + (GA)n Simple_repeat Simple_repeat 2 75 0 3 1275 993 329 22 10 chr15 90521426 90521563 -12973411 + L1M5 LINE L1 5615 5751 -428 3 1275 1175 62 7 0 chr15 90521605 90521750 -12973224 + B1_Mus2 SINE Alu 1 146 -1 3 1275 550 279 8 0 chr15 90522595 90522724 -12972250 - MTE-int LTR MaLR -288 1292 1163 3 1275 639 246 78 10 chr15 90522722 90522927 -12972047 + MTE2b-int LTR MaLR 1361 1579 -1 3 1275 912 298 96 4 chr15 90522972 90523252 -12971722 + MTE2b LTR MaLR 1 306 -73 3 1275 1364 268 85 13 chr15 90524498 90524971 -12970003 + L1M2 LINE L1 3769 4275 -1868 3 1275 1415 214 113 13 chr15 90524992 90525371 -12969603 + MTD LTR MaLR 3 419 0 3 1275 1171 58 11 39 chr15 90525506 90525685 -12969289 - B2_Mm2 SINE B2 -21 174 1 3 1275 652 275 67 0 chr15 90525746 90525939 -12969035 - B3 SINE B2 -9 207 2 4 1275 446 331 60 5 chr15 90526123 90526308 -12968666 + B4A SINE B4 2 196 -96 4 1275 1507 68 5 0 chr15 90526419 90526610 -12968364 + B2_Mm1a SINE B2 1 192 -1 4 1275 180 0 0 0 chr15 90526670 90526690 -12968284 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1275 908 220 215 8 chr15 90526690 90526951 -12968023 - L1_Rod LINE L1 -1764 4083 3769 4 1275 3244 249 92 38 chr15 90527450 90527919 -12967055 - L1_Rod LINE L1 -2247 3600 3118 4 1275 216 111 0 0 chr15 90527919 90527955 -12967019 + (TTG)n Simple_repeat Simple_repeat 2 37 0 4 1275 3244 249 92 38 chr15 90527955 90528040 -12966934 - L1_Rod LINE L1 -2730 3117 3030 4 1275 1266 98 16 0 chr15 90528040 90528224 -12966750 - B2_Mm1t SINE B2 -5 188 2 4 1275 3244 249 92 38 chr15 90528224 90528920 -12966054 - L1_Rod LINE L1 -2818 3029 2282 4 1275 490 285 19 46 chr15 90528912 90528929 -12966045 - L1_Rod LINE L1 -4381 1466 1451 4 1275 201 39 0 0 chr15 90528929 90528955 -12966019 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1275 1028 282 37 83 chr15 90528955 90529604 -12965370 - L1_Rod LINE L1 -4397 1450 827 4 1275 348 24 0 0 chr15 90529915 90529956 -12965018 + (TC)n Simple_repeat Simple_repeat 2 42 0 4 1275 404 149 0 11 chr15 90529956 90530051 -12964923 + (TG)n Simple_repeat Simple_repeat 2 95 0 4 1275 1008 193 76 91 chr15 90530063 90530460 -12964514 - MT2A LTR ERVL -70 531 1 5 1275 255 240 36 91 chr15 90531159 90531269 -12963705 - ERVL-int LTR ERVL -742 5015 4912 5 1275 830 94 72 0 chr15 90531738 90531876 -12963098 + URR1A DNA MER1_type 79 226 0 5 1275 357 271 30 30 chr15 90532055 90532188 -12962786 + MamGypLTR2b LTR Gypsy 764 896 -26 5 1275 354 308 0 0 chr15 90532267 90532374 -12962600 + PB1D10 SINE Alu 2 108 -9 5 1275 621 0 0 0 chr15 90533316 90533385 -12961589 + (GAAA)n Simple_repeat Simple_repeat 2 70 0 5 1275 1227 88 53 0 chr15 90533522 90533692 -12961282 + B2_Mm2 SINE B2 2 180 -15 5 1275 1156 36 0 14 chr15 90533703 90533844 -12961130 - B1_Mm SINE Alu -8 139 1 5 1275 234 0 0 0 chr15 90533858 90533884 -12961090 + (A)n Simple_repeat Simple_repeat 1 26 0 5 1275 207 0 0 0 chr15 90534865 90534888 -12960086 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1275 803 240 29 10 chr15 90535249 90535455 -12959519 - B3 SINE B2 -6 210 1 6 1275 525 214 226 21 chr15 90535733 90535919 -12959055 + MTD LTR MaLR 196 419 0 6 1275 1962 123 37 29 chr15 90536065 90536415 -12958559 + RLTR15 LTR ERVK 1 353 -6 6 1275 4092 37 5 89 chr15 90537630 90538189 -12956785 - RLTR1B LTR ERV1 0 512 1 6 1275 246 320 33 33 chr15 90538241 90538422 -12956552 - L1MC5 LINE L1 -465 7496 7316 6 1275 275 221 81 63 chr15 90538851 90538962 -12956012 - L1MC5 LINE L1 -1090 6871 6759 6 1275 698 201 50 7 chr15 90539409 90539549 -12955425 + B1_Mus2 SINE Alu 2 147 0 6 1275 4437 51 8 0 chr15 90541073 90541607 -12953367 - L1Md_F2 LINE L1 0 6582 6045 6 1275 4406 26 2 0 chr15 90541639 90542140 -12952834 + L1Md_F2 LINE L1 5587 6088 -494 6 1275 330 155 0 0 chr15 90542140 90542198 -12952776 - RLTR20A LTR ERVK -101 440 383 6 1275 348 277 96 89 chr15 90542169 90542450 -12952524 - RLTR16 LTR ERVK -220 285 3 6 1275 526 196 43 30 chr15 90542452 90542618 -12952356 + B3 SINE B2 27 195 0 7 1275 238 291 76 28 chr15 90542856 90543001 -12951973 - L1MC5 LINE L1 -492 7469 7318 7 1275 28 71 0 0 chr15 90543403 90543459 -12951515 + AT_rich Low_complexity Low_complexity 1 56 0 7 1275 519 339 49 31 chr15 90543467 90543753 -12951221 + B4A SINE B4 1 291 -1 7 1275 299 164 0 29 chr15 90543837 90543895 -12951079 + GA-rich Low_complexity Low_complexity 5 60 0 7 1275 1068 107 11 11 chr15 90543895 90544075 -12950899 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 7 1275 29 0 0 0 chr15 90544640 90544669 -12950305 + AT_rich Low_complexity Low_complexity 1 29 0 7 1275 327 234 83 98 chr15 90544817 90545021 -12949953 - Lx9 LINE L1 -1 7643 7443 7 1275 366 23 0 0 chr15 90545026 90545069 -12949905 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 1275 776 93 17 0 chr15 90546259 90546377 -12948597 + (GGGGA)n Simple_repeat Simple_repeat 3 122 0 7 1275 23 0 0 0 chr15 90546671 90546694 -12948280 + AT_rich Low_complexity Low_complexity 1 23 0 8 1275 1155 68 7 0 chr15 90546704 90546850 -12948124 + B1_Mus1 SINE Alu 2 148 0 8 1275 208 135 0 0 chr15 90546850 90546887 -12948087 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 8 1275 2217 228 42 33 chr15 90547067 90547693 -12947281 + MERVL_2A-int LTR ERVL 2343 3048 -2713 8 1275 222 37 0 0 chr15 90547749 90547776 -12947198 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 8 1275 2370 109 9 6 chr15 90548024 90548366 -12946608 - ORR1A1 LTR MaLR -3 343 1 8 1275 2621 242 46 14 chr15 90548669 90549302 -12945672 + MERVL_2A-int LTR ERVL 3336 3988 -1773 8 1275 2029 256 38 112 chr15 90549710 90550520 -12944454 + MERVL_2A-int LTR ERVL 4841 5590 -171 8 1275 201 118 0 56 chr15 90550617 90550653 -12944321 + T-rich Low_complexity Low_complexity 1 34 0 8 1275 250 305 94 9 chr15 90551087 90551193 -12943781 - ORR1E LTR MaLR -221 138 24 8 1275 329 293 97 26 chr15 90551674 90551828 -12943146 - ERVL-E-int LTR ERVL -1247 4420 4256 8 1275 187 358 79 12 chr15 90552835 90552999 -12941975 + MIRb SINE MIR 72 246 -22 8 1275 337 200 0 32 chr15 90554475 90554544 -12940430 + GA-rich Low_complexity Low_complexity 3 70 0 9 1275 1006 131 17 0 chr15 90554544 90554720 -12940254 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 9 1275 337 200 0 32 chr15 90554720 90554743 -12940231 + polypurine Low_complexity Low_complexity 71 92 0 9 1275 832 129 35 12 chr15 90554743 90554916 -12940058 + GA-rich Low_complexity Low_complexity 2 178 0 9 1275 495 151 26 26 chr15 90554925 90554957 -12940017 + polypurine Low_complexity Low_complexity 1 32 0 9 1275 967 103 22 17 chr15 90554957 90555135 -12939839 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 9 1275 495 151 26 26 chr15 90555135 90555218 -12939756 + polypurine Low_complexity Low_complexity 33 116 0 9 1275 22 94 0 0 chr15 90555714 90555778 -12939196 + AT_rich Low_complexity Low_complexity 1 64 0 9 1275 1052 256 41 38 chr15 90555973 90556339 -12938635 + Lx7 LINE L1 5926 6292 -1404 9 1275 2105 149 29 42 chr15 90556343 90556729 -12938245 + RLTR20B1 LTR ERVK 77 457 -106 9 1275 887 60 0 17 chr15 90556733 90556852 -12938122 + B1_Mus2 SINE Alu 31 147 0 1 1275 546 16 0 0 chr15 90556870 90556933 -12938041 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 1275 540 30 0 0 chr15 90556933 90556998 -12937976 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 1275 440 217 31 42 chr15 90556998 90557094 -12937880 + RLTR20B1 LTR ERVK 466 560 -3 9 1275 2975 212 34 15 chr15 90557103 90557774 -12937200 + Lx7 LINE L1 6303 6986 -710 9 1275 2058 58 0 4 chr15 90557770 90558030 -12936944 + Lx7 LINE L1 5327 5586 -297 1 1275 7889 57 3 4 chr15 90558030 90559027 -12935947 + L1Md_F2 LINE L1 5587 6582 0 1 1275 2058 203 12 12 chr15 90559027 90559176 -12935798 + Lx7 LINE L1 5587 5600 -283 1 1275 424 243 128 16 chr15 90559174 90559362 -12935612 + Lx7 LINE L1 7203 7411 -285 1 1275 298 213 64 18 chr15 90559418 90559528 -12935446 + Lx7 LINE L1 7565 7679 -17 1 1275 1146 252 58 14 chr15 90560688 90561050 -12933924 - MTEb LTR MaLR -1 378 1 1 1275 1190 292 42 14 chr15 90561050 90561512 -12933462 - MTEb-int LTR MaLR 0 1580 1069 1 1275 1373 270 50 18 chr15 90561512 90561851 -12933123 + ORR1E LTR MaLR 1 350 -9 1 1275 359 53 35 0 chr15 90561853 90561910 -12933064 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 1 1275 1562 315 64 15 chr15 90561943 90562472 -12932502 - MTEb-int LTR MaLR -511 1069 515 1 1275 794 178 6 0 chr15 90562489 90562652 -12932322 + (TA)n Simple_repeat Simple_repeat 1 164 0 1 1275 33 25 0 0 chr15 90563532 90563572 -12931402 + AT_rich Low_complexity Low_complexity 1 40 0 1 1275 24 32 0 0 chr15 90563689 90563720 -12931254 + AT_rich Low_complexity Low_complexity 1 31 0 1 1275 378 346 86 24 chr15 90564726 90565016 -12929958 - L1MC3 LINE L1 -385 7400 7093 1 1275 272 329 79 0 chr15 90565133 90565273 -12929701 - L1MC3 LINE L1 -858 6927 6777 1 1275 421 333 0 0 chr15 90565307 90565409 -12929565 - PB1D10 SINE Alu -5 112 11 1 1275 314 394 0 43 chr15 90565325 90565463 -12929511 - ID_B1 SINE B4 -49 175 44 1 1275 357 353 160 23 chr15 90565804 90565933 -12929041 + L2 LINE L2 1007 1135 -2284 1 1275 1286 55 0 0 chr15 90565933 90566096 -12928878 - L1Md_T LINE L1 0 6582 6420 1 1275 357 353 160 23 chr15 90566096 90566398 -12928576 + L2 LINE L2 1136 1497 -1922 1 1275 1166 75 7 0 chr15 90566496 90566643 -12928331 - B1_Mus1 SINE Alu 0 148 1 1 1275 546 16 0 0 chr15 90566696 90566759 -12928215 + (GAAA)n Simple_repeat Simple_repeat 3 65 0 1 1275 289 327 0 0 chr15 90567117 90567230 -12927744 + (TTATG)n Simple_repeat Simple_repeat 5 117 0 1 1275 390 344 0 0 chr15 90567244 90567424 -12927550 + (TTATG)n Simple_repeat Simple_repeat 1 180 0 1 1275 454 322 0 0 chr15 90567444 90567624 -12927350 + (TTATG)n Simple_repeat Simple_repeat 1 180 0 1 1275 264 143 0 0 chr15 90568950 90569006 -12925968 + (T)n Simple_repeat Simple_repeat 1 56 0 1 1275 3074 64 18 0 chr15 90569599 90569992 -12924982 + MTB LTR MaLR 1 400 0 1 1275 260 324 10 8 chr15 90570037 90570171 -12924803 + L1M3 LINE L1 2655 2786 -3360 1 1275 394 258 18 24 chr15 90570182 90570349 -12924625 - L1M3 LINE L1 -3223 2917 2752 1 1276 2146 231 11 11 chr15 90571120 90571588 -12923386 + Lx5 LINE L1 6577 7044 -6 1 1276 1840 259 65 47 chr15 90571876 90572472 -12922502 - Lx7 LINE L1 -740 6956 6350 1 1276 526 256 43 10 chr15 90572636 90572837 -12922137 + Lx8 LINE L1 3768 3980 -1867 1 1276 318 50 0 0 chr15 90572837 90572877 -12922097 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1276 461 275 85 13 chr15 90572877 90572911 -12922063 + Lx8 LINE L1 3981 4021 -1826 1 1276 1332 292 95 34 chr15 90572905 90574029 -12920945 + Lx8 LINE L1 4728 5922 -1551 1 1276 474 301 67 10 chr15 90574300 90574495 -12920479 + Lx8 LINE L1 6246 6451 -1022 1 1276 324 48 0 0 chr15 90574509 90574551 -12920423 + (CCCTAA)n Simple_repeat Simple_repeat 3 44 0 1 1276 1016 260 50 52 chr15 90574566 90574948 -12920026 + Lx8 LINE L1 6621 7001 -472 1 1276 478 323 58 5 chr15 90574967 90575157 -12919817 + Lx8 LINE L1 7060 7259 -214 1 1276 284 266 0 0 chr15 90575170 90575234 -12919740 + RMER15 LTR ERVL 403 466 -109 1 1276 183 273 45 15 chr15 90575521 90575588 -12919386 + MER5B DNA MER1_type 58 126 -52 1 1276 279 0 0 0 chr15 90576311 90576342 -12918632 + (TCC)n Simple_repeat Simple_repeat 3 33 0 1 1276 2936 139 37 10 chr15 90576533 90577019 -12917955 - RLTR19 LTR ERVK 0 499 1 1 1276 1142 212 154 4 chr15 90577702 90577981 -12916993 - MTD LTR MaLR -14 405 85 1 1276 22 70 0 0 chr15 90578320 90578363 -12916611 + AT_rich Low_complexity Low_complexity 1 43 0 1 1276 411 320 79 31 chr15 90578584 90578874 -12916100 + L1M5 LINE L1 4102 4405 -1741 1 1276 1102 86 0 7 chr15 90578884 90579036 -12915938 + B2_Mm2 SINE B2 4 154 -41 1 1276 189 0 0 0 chr15 90579036 90579057 -12915917 + (CAAT)n Simple_repeat Simple_repeat 1 21 0 1 1276 723 265 4 44 chr15 90579593 90579842 -12915132 + Lx9 LINE L1 6954 7192 -452 1 1276 230 328 69 23 chr15 90579921 90580183 -12914791 + Lx9 LINE L1 7324 7597 -47 1 1276 293 312 83 0 chr15 90580728 90580824 -12914150 + PB1D9 SINE Alu 10 113 -7 1 1276 262 281 0 0 chr15 90581029 90581137 -12913837 + (TG)n Simple_repeat Simple_repeat 1 108 0 1 1276 1533 267 199 8 chr15 90581195 90581804 -12913170 - Lx8 LINE L1 -236 7237 6513 1 1276 294 250 26 26 chr15 90581807 90581885 -12913089 + B3A SINE B2 114 191 -7 1 1276 210 47 68 23 chr15 90582778 90582822 -12912152 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 1 1276 233 306 134 64 chr15 90583123 90583377 -12911597 + MLT1E2 LTR MaLR 1 265 -362 1 1276 505 325 46 0 chr15 90583426 90583577 -12911397 + MTEa LTR MaLR 3 160 -219 1 1276 370 362 35 35 chr15 90583577 90583626 -12911348 + MT2A LTR ERVL 3 207 -326 1 1276 282 29 0 0 chr15 90583626 90583661 -12911313 + (CTG)n Simple_repeat Simple_repeat 2 36 0 1 1276 457 277 112 19 chr15 90583661 90583823 -12911151 + MT2A LTR ERVL 208 423 -110 1 1276 243 83 0 0 chr15 90583836 90583860 -12911114 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 1276 312 27 0 0 chr15 90583860 90583897 -12911077 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1276 243 83 0 0 chr15 90583897 90583908 -12911066 + (TA)n Simple_repeat Simple_repeat 2 12 0 1 1276 516 300 59 56 chr15 90583924 90584204 -12910770 - ORR1E LTR MaLR -15 364 68 1 1276 4287 151 76 71 chr15 90584204 90585090 -12909884 + RMER19B LTR ERVK 1 890 -12 1 1276 549 131 232 65 chr15 90585258 90585413 -12909561 + RMER19C LTR ERVK 309 489 -413 1 1276 1051 189 97 22 chr15 90585400 90585627 -12909347 + RMER19C LTR ERVK 368 611 0 1 1276 180 0 0 0 chr15 90587595 90587615 -12907359 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1276 293 313 124 23 chr15 90588826 90589082 -12905892 + L2a LINE L2 2835 3114 -312 1 1276 279 0 0 0 chr15 90589126 90589157 -12905817 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1276 3339 31 10 2 chr15 90589569 90589962 -12905012 + MTA_Mm LTR MaLR 1 396 0 1 1276 1359 93 0 5 chr15 90590985 90591191 -12903783 - L1_Mus4 LINE L1 0 6636 6432 1 1276 1447 221 17 0 chr15 90591192 90591482 -12903492 + RLTR14 LTR ERV1 88 382 0 1 1276 402 37 0 0 chr15 90591576 90591630 -12903344 - L1Md_F2 LINE L1 -12 6570 6517 1 1276 703 310 50 87 chr15 90592221 90592602 -12902372 + ORR1D2 LTR MaLR 1 367 -3 1 1276 548 263 0 87 chr15 90592856 90593039 -12901935 + B4A SINE B4 101 267 -25 1 1276 212 392 9 0 chr15 90593073 90593180 -12901794 + (CATATA)n Simple_repeat Simple_repeat 4 111 0 1 1276 642 202 0 0 chr15 90593667 90593786 -12901188 + ORR1A4-int LTR MaLR 1841 1959 -4 1 1276 1365 164 45 87 chr15 90593790 90594078 -12900896 + ORR1A4 LTR MaLR 1 276 -53 1 1276 419 172 71 51 chr15 90594157 90594255 -12900719 + B3 SINE B2 117 216 0 1 1276 2285 85 84 47 chr15 90594272 90594654 -12900320 - RLTR13C1 LTR ERVK 0 983 588 1 1276 198 0 0 0 chr15 90594654 90594676 -12900298 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1276 3689 110 86 11 chr15 90595176 90595842 -12899132 - RLTR13D3 LTR ERVK -314 719 1 1 1276 332 193 0 0 chr15 90596204 90596261 -12898713 - HAL1-3A_ME LINE L1 -827 2031 1975 1 1276 736 91 7 29 chr15 90596269 90596405 -12898569 + (TA)n Simple_repeat Simple_repeat 2 134 0 1 1276 434 295 63 57 chr15 90596966 90597332 -12897642 - ORR1E LTR MaLR -1 373 7 1 1276 291 175 0 0 chr15 90597537 90597594 -12897380 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1276 253 208 14 14 chr15 90597663 90597736 -12897238 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 1276 21 0 0 0 chr15 90599268 90599289 -12895685 + AT_rich Low_complexity Low_complexity 1 21 0 1 1276 908 175 72 67 chr15 90599289 90599332 -12895642 - B3 SINE B2 -7 209 174 1 1276 288 77 0 0 chr15 90599332 90599371 -12895603 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1 1276 1191 81 0 7 chr15 90599371 90599535 -12895439 - B2_Mm2 SINE B2 -43 173 1 1 1276 1864 156 21 38 chr15 90601100 90601473 -12893501 + ORR1B2 LTR MaLR 1 367 0 1 1276 1695 180 94 21 chr15 90602104 90602434 -12892540 - MTC LTR MaLR 0 421 68 1 1276 789 184 7 13 chr15 90602494 90602648 -12892326 - Lx5 LINE L1 0 7050 6898 1 1276 403 212 12 0 chr15 90602648 90602728 -12892246 - MTC LTR MaLR -340 81 1 1 1276 570 338 67 8 chr15 90603024 90603292 -12891682 + B4A SINE B4 3 286 -6 1 1276 378 0 0 0 chr15 90603333 90603375 -12891599 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1276 383 281 70 40 chr15 90603458 90603658 -12891316 - Lx8 LINE L1 -30 7443 7238 1 1276 22 0 0 0 chr15 90603694 90603716 -12891258 + AT_rich Low_complexity Low_complexity 1 22 0 1 1276 1054 94 0 0 chr15 90604599 90604737 -12890237 - B1_Mus1 SINE Alu -9 139 2 1 1276 1443 270 86 40 chr15 90604741 90604891 -12890083 + Lx8 LINE L1 5072 5210 -637 1 1276 180 0 0 0 chr15 90604891 90604911 -12890063 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1276 1443 270 86 40 chr15 90604911 90605431 -12889543 + Lx8 LINE L1 5211 5773 -74 1 1276 366 274 0 10 chr15 90605581 90605735 -12889239 + Lx8 LINE L1 5770 5958 -1686 1 1276 411 125 0 0 chr15 90605953 90606025 -12888949 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 1276 207 0 0 0 chr15 90606025 90606047 -12888927 + (GA)n Simple_repeat Simple_repeat 2 24 0 1 1276 2048 273 138 6 chr15 90606053 90606346 -12888628 + Lx8 LINE L1 6206 6566 -907 1 1276 303 71 0 0 chr15 90606346 90606388 -12888586 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1 1276 2048 273 138 6 chr15 90606388 90606898 -12888076 + Lx8 LINE L1 6567 7114 -359 1 1276 340 267 99 40 chr15 90607228 90607380 -12887594 + Lx8 LINE L1 7078 7238 -235 1 1276 4043 195 57 19 chr15 90607400 90607627 -12887347 - Lx9 LINE L1 -8 7636 7413 1 1276 180 0 0 0 chr15 90607627 90607647 -12887327 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 1276 4043 195 57 19 chr15 90607647 90608406 -12886568 - Lx9 LINE L1 -232 7412 6613 1 1276 1137 294 20 20 chr15 90608848 90608896 -12886078 - Lx8 LINE L1 -475 6998 6954 1 1276 1012 174 50 27 chr15 90608896 90609115 -12885859 + URR1B DNA MER1_type 1 224 -1 1 1276 1137 294 20 20 chr15 90609115 90609458 -12885516 - Lx8 LINE L1 -520 6953 6607 1 1276 687 249 121 6 chr15 90610392 90610574 -12884400 + ID_B1 SINE B4 21 223 -1 1 1276 375 60 0 0 chr15 90610818 90610868 -12884106 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 1276 251 125 34 51 chr15 90612340 90612399 -12882575 + RLTR12A LTR ERVK 260 317 -251 1 1276 310 231 206 11 chr15 90613573 90613665 -12881309 + B1F2 SINE Alu 40 149 0 1 1276 269 216 263 26 chr15 90613973 90614049 -12880925 + PB1D10 SINE Alu 34 127 0 1 1276 473 354 45 75 chr15 90614723 90614989 -12879985 - MER21B LTR ERV1 -597 266 9 2 1276 213 333 0 0 chr15 90615106 90615163 -12879811 - ID SINE ID -142 82 26 2 1276 22 0 0 0 chr15 90616133 90616155 -12878819 + AT_rich Low_complexity Low_complexity 1 22 0 2 1276 187 329 145 30 chr15 90617490 90617656 -12877318 - MIRc SINE MIR -39 229 45 2 1276 485 200 10 10 chr15 90617770 90617866 -12877108 - PB1D10 SINE Alu 0 117 22 2 1276 1400 85 11 0 chr15 90617985 90618162 -12876812 + B2_Mm1t SINE B2 1 179 -14 2 1276 290 116 207 59 chr15 90618209 90618322 -12876652 + B2_Mm2 SINE B2 47 190 -3 2 1276 1269 263 76 0 chr15 90619378 90619720 -12875254 + MTEb LTR MaLR 6 373 -6 2 1276 249 33 0 0 chr15 90621466 90621496 -12873478 + (TTG)n Simple_repeat Simple_repeat 1 30 0 2 1276 387 0 0 0 chr15 90621935 90621978 -12872996 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1276 2128 97 85 0 chr15 90622110 90622441 -12872533 - Lx2 LINE L1 -76 6921 6563 2 1276 1407 90 6 0 chr15 90622501 90622678 -12872296 + B2_Mm1a SINE B2 1 178 -15 2 1276 213 39 0 0 chr15 90622778 90622804 -12872170 + (CAAAA)n Simple_repeat Simple_repeat 4 29 0 2 1276 279 79 0 0 chr15 90622966 90623004 -12871970 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1276 1804 309 63 15 chr15 90625109 90625760 -12869214 + Lx8 LINE L1 6252 6933 -540 2 1276 447 264 24 16 chr15 90626193 90626316 -12868658 + RSINE1 SINE B4 2 125 -40 2 1276 26 0 0 0 chr15 90626325 90626351 -12868623 + AT_rich Low_complexity Low_complexity 1 26 0 2 1276 402 147 0 0 chr15 90626762 90626830 -12868144 + (TTA)n Simple_repeat Simple_repeat 2 69 0 2 1276 192 77 0 0 chr15 90626997 90627023 -12867951 + (GGGA)n Simple_repeat Simple_repeat 4 29 0 2 1276 501 17 0 0 chr15 90627434 90627492 -12867482 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 2 1276 1088 128 0 6 chr15 90628304 90628484 -12866490 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 2 1276 448 183 343 12 chr15 90629154 90629320 -12865654 - MTD LTR MaLR -3 416 196 2 1276 3609 299 66 59 chr15 90629338 90631543 -12863431 - Lx8 LINE L1 -2 7471 5216 2 1276 561 125 0 0 chr15 90631543 90631631 -12863343 + (TA)n Simple_repeat Simple_repeat 2 89 0 2 1276 3344 248 48 115 chr15 90631631 90632439 -12862535 - Lx8 LINE L1 -665 5215 4483 2 1276 1249 270 56 39 chr15 90632446 90632626 -12862348 + L1_Mur3 LINE L1 3142 3326 -2554 2 1276 1543 77 0 25 chr15 90632626 90632825 -12862149 + B2_Mm2 SINE B2 2 195 0 2 1276 1249 270 56 39 chr15 90632825 90633130 -12861844 + L1_Mur3 LINE L1 3327 3635 -2245 2 1276 1264 269 48 28 chr15 90633310 90633812 -12861162 - Lx8 LINE L1 -2857 3023 2512 2 1276 1910 207 36 22 chr15 90634104 90634637 -12860337 + Lx2B LINE L1 6045 6873 -124 2 1276 4631 88 15 2 chr15 90634638 90635239 -12859735 - L1_Mus3 LINE L1 -7 6631 6023 2 1276 33 0 0 0 chr15 90635239 90635272 -12859702 + AT_rich Low_complexity Low_complexity 1 33 0 2 1276 351 245 32 0 chr15 90635272 90635366 -12859608 + L1_Mur1 LINE L1 5391 5487 -399 2 1276 988 266 20 92 chr15 90635643 90635699 -12859275 - MTE2b LTR MaLR -95 284 233 2 1276 1674 224 21 34 chr15 90635699 90636078 -12858896 - ORR1D1 LTR MaLR 0 374 1 2 1276 988 266 20 92 chr15 90636078 90636327 -12858647 - MTE2b LTR MaLR -147 232 1 2 1276 261 0 0 0 chr15 90636722 90636751 -12858223 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1276 449 34 0 17 chr15 90637490 90637550 -12857424 + (TTG)n Simple_repeat Simple_repeat 1 59 0 2 1276 723 232 115 10 chr15 90637914 90638106 -12856868 - B3 SINE B2 0 216 5 2 1276 33 0 0 0 chr15 90638612 90638645 -12856329 + AT_rich Low_complexity Low_complexity 1 33 0 2 1276 2103 37 4 4 chr15 90639868 90640111 -12854863 - L1Md_F2 LINE L1 -12 6570 6328 2 1276 4027 171 49 28 chr15 90640356 90640587 -12854387 - RLTR40 LTR ERVK -4 813 569 2 1276 453 19 0 0 chr15 90640587 90640641 -12854333 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1276 330 26 0 0 chr15 90640641 90640679 -12854295 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 1276 4027 171 49 28 chr15 90640679 90641242 -12853732 - RLTR40 LTR ERVK -249 568 4 2 1276 1027 77 0 40 chr15 90642330 90642478 -12852496 + B1_Mus1 SINE Alu 7 148 0 2 1276 486 250 29 88 chr15 90642333 90642504 -12852470 + B4A SINE B4 94 254 -38 2 1276 346 336 0 0 chr15 90643061 90643180 -12851794 - MuRRS4-int LTR ERV1 -1331 3732 3614 2 1276 410 114 0 14 chr15 90643268 90643339 -12851635 + (GGA)n Simple_repeat Simple_repeat 2 71 0 2 1276 1706 209 23 80 chr15 90643402 90643839 -12851135 - MTD LTR MaLR -7 412 1 2 1276 339 374 69 13 chr15 90645251 90645484 -12849490 + L2 LINE L2 2821 3066 -353 2 1276 187 330 64 0 chr15 90645565 90645659 -12849315 + L2 LINE L2 2329 2428 -991 2 1276 276 333 0 0 chr15 90647294 90647390 -12847584 - MuRRS4-int LTR ERV1 -4096 2580 2485 2 1276 270 370 24 0 chr15 90647975 90648102 -12846872 - MuRRS4-int LTR ERV1 -5330 1875 1746 2 1276 22 35 0 0 chr15 90649715 90649744 -12845230 + AT_rich Low_complexity Low_complexity 1 29 0 2 1276 746 179 232 11 chr15 90650293 90650474 -12844500 + URR1A DNA MER1_type 1 221 -5 2 1276 297 0 0 0 chr15 90651268 90651301 -12843673 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1276 207 0 0 0 chr15 90651301 90651323 -12843651 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 1276 1354 21 22 0 chr15 90651427 90651659 -12843315 + (TAGA)n Simple_repeat Simple_repeat 1 237 0 2 1276 1485 244 76 63 chr15 90652561 90653085 -12841889 - RMER5 LTR ERV1 -3 531 1 2 1276 836 320 71 9 chr15 90653504 90653841 -12841133 + MLT1A0 LTR MaLR 1 358 -7 2 1276 8566 42 1 3 chr15 90654053 90655090 -12839884 - L1Md_F2 LINE L1 -3 6579 5579 2 1276 4558 7 0 0 chr15 90656334 90656963 -12838011 - L1Md_A LINE L1 -571 6011 5383 2 1276 2430 4 0 0 chr15 90656963 90657217 -12837757 + L1Md_A LINE L1 6329 6582 0 2 1276 234 91 0 0 chr15 90657241 90657274 -12837700 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1276 285 29 0 0 chr15 90657786 90657820 -12837154 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1276 23 0 0 0 chr15 90659123 90659146 -12835828 + AT_rich Low_complexity Low_complexity 1 23 0 2 1276 646 264 70 0 chr15 90659163 90659292 -12835682 - RSINE1 SINE B4 -22 143 6 2 1276 5106 74 8 18 chr15 90659455 90660115 -12834859 + L1Md_F2 LINE L1 5930 6582 0 2 1276 1492 190 157 52 chr15 90660206 90660701 -12834273 + RMER19B LTR ERVK 25 715 -187 2 1276 2448 201 6 166 chr15 90661333 90662061 -12832913 + RMER19C LTR ERVK 1 611 0 2 1276 1486 199 141 124 chr15 90664943 90665396 -12829578 - RMER6B LTR ERVK 0 461 1 2 1276 294 292 56 40 chr15 90665997 90666122 -12828852 + Helitron1Nb_Mam RC Helitron 28 154 -962 2 1276 1791 250 140 69 chr15 90666817 90666915 -12828059 + Lx9 LINE L1 6156 6249 -1395 2 1276 963 91 6 11 chr15 90666915 90667092 -12827882 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 2 1276 1791 250 140 69 chr15 90667092 90667702 -12827272 + Lx9 LINE L1 6250 6914 -730 2 1276 3042 146 14 4 chr15 90667720 90668208 -12826766 - RLTR19 LTR ERVK -6 493 1 2 1276 1071 311 110 28 chr15 90668208 90668707 -12826267 + Lx9 LINE L1 6913 7452 -192 2 1276 1334 222 39 2 chr15 90668985 90669278 -12825696 + RMER1C Other Other 771 1114 -228 2 1276 1428 223 16 69 chr15 90669303 90669491 -12825483 + RMER10B LTR ERVL 32 200 -198 2 1276 423 0 0 0 chr15 90669491 90669538 -12825436 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 2 1276 1428 223 16 69 chr15 90669538 90669725 -12825249 + RMER10B LTR ERVL 201 387 -11 2 1276 2786 69 39 101 chr15 90670357 90670791 -12824183 + MTB_Mm LTR MaLR 1 407 0 2 1276 353 232 39 0 chr15 90670899 90671006 -12823968 + RSINE1 SINE B4 1 140 -25 2 1276 438 20 0 0 chr15 90671006 90671057 -12823917 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1276 1580 59 5 0 chr15 90671665 90671869 -12823105 - MTB LTR MaLR -195 205 1 2 1276 3098 61 0 3 chr15 90672199 90672577 -12822397 + L1Md_F2 LINE L1 6206 6582 0 2 1276 1031 200 170 61 chr15 90673135 90673623 -12821351 + RLTR19-int LTR ERVK 3551 3963 -2174 2 1276 1370 122 11 0 chr15 90673638 90673826 -12821148 - B2_Mm1t SINE B2 -3 190 1 2 1276 267 224 14 56 chr15 90673846 90673917 -12821057 + RLTR19-int LTR ERVK 4039 4106 -2031 2 1276 717 235 0 0 chr15 90674143 90674322 -12820652 + (TA)n Simple_repeat Simple_repeat 2 180 0 2 1276 428 263 37 22 chr15 90674440 90674576 -12820398 + RLTR19-int LTR ERVK 4238 4375 -1762 2 1276 2762 262 78 19 chr15 90675331 90676153 -12818821 - Lx8 LINE L1 -278 7195 6326 2 1276 1230 262 69 54 chr15 90676149 90676550 -12818424 + Lx8 LINE L1 5109 5500 -347 2 1276 2638 86 3 0 chr15 90676550 90676876 -12818098 - ORR1A2 LTR MaLR 0 327 1 2 1276 1230 262 73 52 chr15 90676876 90677109 -12817865 + Lx8 LINE L1 5501 5788 -1685 2 1276 240 35 0 0 chr15 90677697 90677726 -12817248 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1276 238 272 52 67 chr15 90677881 90678015 -12816959 - MER53 DNA hAT -14 179 48 2 1276 266 325 66 16 chr15 90678311 90678433 -12816541 + B1_Mur1 SINE Alu 3 130 -19 2 1276 444 214 106 7 chr15 90679157 90679298 -12815676 + LTR82A LTR ERVL 1 155 -717 2 1276 237 146 0 0 chr15 90679553 90679601 -12815373 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 1276 512 149 11 0 chr15 90679597 90679691 -12815283 + GA-rich Low_complexity Low_complexity 2 96 0 2 1276 1275 89 0 0 chr15 90679692 90679871 -12815103 + (GGAGAA)n Simple_repeat Simple_repeat 2 180 0 2 1276 459 0 0 0 chr15 90679871 90679922 -12815052 + (CAA)n Simple_repeat Simple_repeat 1 51 0 2 1276 260 190 33 33 chr15 90679923 90679983 -12814991 - RSINE1 SINE B4 -103 62 3 2 1276 1249 63 0 0 chr15 90680093 90680235 -12814739 + B1_Mus1 SINE Alu 2 143 -5 2 1276 633 242 0 0 chr15 90681107 90681272 -12813702 + (TA)n Simple_repeat Simple_repeat 1 165 0 2 1276 2000 231 29 60 chr15 90681712 90682224 -12812750 + RMER20A LTR ERVK 21 516 0 2 1276 25 0 0 0 chr15 90682832 90682857 -12812117 + AT_rich Low_complexity Low_complexity 1 25 0 2 1276 1082 135 53 86 chr15 90682907 90683151 -12811823 + RMER17C LTR ERVK 144 379 -31 2 1276 238 313 292 0 chr15 90683857 90684004 -12810970 - MIRb SINE MIR -24 244 55 2 1276 528 200 0 167 chr15 90684007 90684169 -12810805 + RLTR11A2 LTR ERVK 1 135 -318 2 1276 207 0 0 0 chr15 90685038 90685061 -12809913 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1276 1658 206 50 21 chr15 90685063 90685444 -12809530 + RLTR11A2 LTR ERVK 136 527 0 2 1276 387 0 0 0 chr15 90685914 90685957 -12809017 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 1276 336 318 185 62 chr15 90686475 90686800 -12808174 + MLT1J1 LTR MaLR 68 432 -16 3 1276 673 304 152 30 chr15 90686833 90687334 -12807640 - LTR82A LTR ERVL -92 780 219 3 1276 2442 151 50 23 chr15 90687463 90688243 -12806731 - RMER6A LTR ERVK 0 756 57 3 1276 1665 221 170 25 chr15 90688430 90688866 -12806108 + RLTR19 LTR ERVK 1 499 0 3 1276 442 113 0 20 chr15 90689009 90689108 -12805866 + (TCTCTG)n Simple_repeat Simple_repeat 6 102 0 3 1276 746 237 79 102 chr15 90690027 90690408 -12804566 + Lx7 LINE L1 7320 7691 -5 3 1276 380 278 0 53 chr15 90691387 90691501 -12803473 + RLTR42-int LTR ERVK 2867 2974 -2548 3 1276 270 321 36 14 chr15 90691763 90691902 -12803072 + RLTR42-int LTR ERVK 4095 4236 -1286 3 1276 778 355 66 39 chr15 90692149 90692635 -12802339 - MLT2B3 LTR ERVL -55 499 1 3 1276 381 370 49 31 chr15 90692893 90693116 -12801858 - MamGypLTR2 LTR Gypsy -648 541 315 3 1276 265 310 110 31 chr15 90693525 90693688 -12801286 + LTR37A LTR ERV1 237 412 -14 3 1276 1269 249 50 47 chr15 90694049 90694321 -12800653 - MTE2b LTR MaLR 0 379 107 3 1276 2168 199 22 5 chr15 90694321 90694731 -12800243 + MTD LTR MaLR 3 419 0 3 1276 1269 249 50 47 chr15 90694731 90694821 -12800153 - MTE2b LTR MaLR -273 106 16 3 1276 537 255 107 21 chr15 90695055 90695287 -12799687 - MLT1E1 LTR MaLR -2 652 302 3 1276 528 146 0 0 chr15 90695567 90695656 -12799318 + (TG)n Simple_repeat Simple_repeat 2 90 0 3 1276 22 0 0 0 chr15 90696183 90696205 -12798769 + AT_rich Low_complexity Low_complexity 1 22 0 3 1276 632 285 147 26 chr15 90696297 90696603 -12798371 - Lx7 LINE L1 -365 7331 6989 3 1276 1795 214 79 15 chr15 90696810 90697204 -12797770 - MTD LTR MaLR 0 419 1 3 1276 254 333 102 25 chr15 90697474 90697671 -12797303 - L3 LINE CR1 -1063 3426 3215 3 1276 219 69 0 0 chr15 90698061 90698090 -12796884 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 3 1276 1141 218 178 9 chr15 90698098 90698413 -12796561 + ORR1D1 LTR MaLR 1 368 -6 3 1276 387 0 0 0 chr15 90698461 90698504 -12796470 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 1276 392 262 0 0 chr15 90699382 90699462 -12795512 - ID4_ SINE ID -1 82 3 3 159 1414 305 65 16 chr15 90701404 90702107 -12792867 - L1_Mur3 LINE L1 -250 5630 4893 3 1277 1447 279 96 22 chr15 90702110 90702824 -12792150 - L1_Mur3 LINE L1 -1988 4155 3420 3 1277 360 214 65 49 chr15 90702816 90702939 -12792035 - L1_Mur3 LINE L1 -3308 2572 2448 3 1277 245 255 10 19 chr15 90702968 90703072 -12791902 - L1_Mur3 LINE L1 -2458 3422 3320 3 1277 34828 70 23 9 chr15 90703103 90709024 -12785950 - L1Md_F2 LINE L1 -3 6579 578 3 1277 1503 293 101 52 chr15 90709021 90709354 -12785620 - L1_Mur3 LINE L1 -2542 3338 2978 3 1277 1120 81 0 0 chr15 90709354 90709490 -12785484 + B1_Mus1 SINE Alu 2 137 -11 3 1277 836 20 0 10 chr15 90709490 90709593 -12785381 + (GAA)n Simple_repeat Simple_repeat 1 102 0 3 1277 1503 293 101 52 chr15 90709593 90710021 -12784953 - L1_Mur3 LINE L1 -2903 2977 2571 3 1277 369 0 0 0 chr15 90710021 90710062 -12784912 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1277 1503 293 101 52 chr15 90710062 90710462 -12784512 - L1_Mur3 LINE L1 -3310 2570 2104 3 1277 2295 129 9 3 chr15 90710462 90710789 -12784185 - ORR1A4 LTR MaLR 0 329 1 3 1277 1503 293 101 52 chr15 90710789 90710838 -12784136 - L1_Mur3 LINE L1 -3777 2103 2068 3 1277 1537 241 65 16 chr15 90710885 90711268 -12783706 - MTD LTR MaLR -14 405 4 3 1277 694 269 76 23 chr15 90711279 90711583 -12783391 - L1_Mur3 LINE L1 -3852 2028 1709 3 1277 381 266 122 17 chr15 90711583 90711698 -12783276 - B1_Mur1 SINE Alu -21 128 2 3 1277 394 287 7 128 chr15 90711700 90712004 -12782970 - L1_Mur3 LINE L1 -4172 1708 1442 3 1277 679 193 84 6 chr15 90712109 90712276 -12782698 + RMER5 LTR ERV1 348 527 -7 3 1277 306 221 43 29 chr15 90712551 90712621 -12782353 + Lx7 LINE L1 7154 7224 -472 3 1277 638 141 0 8 chr15 90712647 90712776 -12782198 + (TA)n Simple_repeat Simple_repeat 1 128 0 3 1277 8952 60 26 4 chr15 90714398 90715558 -12779416 + L1Md_F2 LINE L1 4402 5586 -297 3 1277 8606 45 4 5 chr15 90715558 90716555 -12778419 + L1Md_F2 LINE L1 5587 6582 0 3 1277 6491 167 3 157 chr15 90716555 90717131 -12777843 + L1_Mur2 LINE L1 5289 5860 -17 3 1277 274 183 14 14 chr15 90717134 90717206 -12777768 + CT-rich Low_complexity Low_complexity 2 73 0 3 1277 236 370 0 0 chr15 90718829 90718910 -12776064 + RMER15 LTR ERVL 346 426 -149 3 1277 2676 217 77 26 chr15 90718905 90719634 -12775340 - RLTR40 LTR ERVK -37 780 15 3 1277 981 254 51 128 chr15 90719710 90720203 -12774771 - RLTR12B LTR ERVK -32 496 42 3 1277 2521 132 40 29 chr15 90720431 90720852 -12774122 - RMER1B Other Other -1 1065 640 3 1277 3464 10 0 15 chr15 90720860 90721272 -12773702 - MT2_Mm LTR ERVL -87 406 1 3 1277 287 164 16 0 chr15 90721319 90721380 -12773594 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 1277 377 267 215 121 chr15 90721468 90721710 -12773264 + B4A SINE B4 10 277 -15 3 1277 372 22 0 0 chr15 90721710 90721755 -12773219 + (GA)n Simple_repeat Simple_repeat 2 46 0 3 1277 377 267 215 121 chr15 90721755 90721768 -12773206 + B4A SINE B4 278 289 -3 3 1277 2149 288 57 28 chr15 90722029 90722808 -12772166 + Lx9 LINE L1 6364 7164 -480 3 1277 549 239 206 4 chr15 90722819 90723067 -12771907 + Lx9 LINE L1 7325 7622 -22 3 1277 303 122 0 0 chr15 90723077 90723126 -12771848 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 1277 255 241 84 0 chr15 90723888 90723971 -12771003 + L1MA6 LINE L1 6211 6300 0 3 1277 1024 270 110 3 chr15 90724259 90724541 -12770433 + MTD LTR MaLR 1 312 -107 3 1277 387 278 89 44 chr15 90724597 90724755 -12770219 + MER2 DNA MER2_type 90 254 -91 3 1277 2121 198 35 42 chr15 90724816 90725338 -12769636 - L1_Mur3 LINE L1 -7141 571 54 3 1277 2678 91 18 55 chr15 90725346 90725799 -12769175 - MusHAL1 LINE L1 -485 2227 1792 3 1277 587 135 19 0 chr15 90725799 90725903 -12769071 + CT-rich Low_complexity Low_complexity 4 109 0 3 1277 195 129 0 0 chr15 90726351 90726382 -12768592 + (TCCA)n Simple_repeat Simple_repeat 4 34 0 3 1277 374 57 19 0 chr15 90728189 90728242 -12766732 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 3 1277 6273 107 31 2 chr15 90729452 90730583 -12764391 - L1VL2 LINE L1 -2380 1235 66 3 1277 35 24 0 0 chr15 90731719 90731761 -12763213 + AT_rich Low_complexity Low_complexity 1 42 0 3 1277 310 42 0 41 chr15 90732000 90732049 -12762925 + B1_Mur4 SINE Alu 104 150 0 3 1277 225 0 0 0 chr15 90732049 90732074 -12762900 + (CAAAAA)n Simple_repeat Simple_repeat 6 30 0 3 1277 1288 29 0 0 chr15 90732081 90732221 -12762753 + B1_Mus1 SINE Alu 1 140 -8 3 1277 267 31 0 0 chr15 90732221 90732253 -12762721 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 1277 930 270 45 57 chr15 90732610 90732963 -12762011 + MLT1B LTR MaLR 1 349 -41 3 1277 270 0 0 0 chr15 90733677 90733707 -12761267 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 3 1277 927 85 0 0 chr15 90734275 90734405 -12760569 + (GA)n Simple_repeat Simple_repeat 1 130 0 3 1277 1889 314 35 20 chr15 90735249 90736106 -12758868 - L1_Mur3 LINE L1 -34 5846 4977 3 1277 486 215 60 23 chr15 90736598 90736731 -12758243 - RMER5 LTR ERV1 -364 170 33 3 1277 414 0 0 0 chr15 90737143 90737189 -12757785 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1277 1220 278 77 3 chr15 90737586 90737939 -12757035 + MTE2b LTR MaLR 1 379 0 3 1277 489 224 121 15 chr15 90738185 90738355 -12756619 + MT2A LTR ERVL 225 458 -75 3 1277 1212 84 0 0 chr15 90738367 90738510 -12756464 + B1_Mm SINE Alu 2 144 -3 3 1277 476 231 8 13 chr15 90738533 90738779 -12756195 + (TA)n Simple_repeat Simple_repeat 1 244 0 3 1277 205 200 0 0 chr15 90738783 90738818 -12756156 + (CATATA)n Simple_repeat Simple_repeat 3 37 0 3 1277 309 27 176 0 chr15 90738840 90738914 -12756060 + MT2A LTR ERVL 447 533 0 3 1277 2070 86 22 7 chr15 90738963 90739234 -12755740 - L1Md_F2 LINE L1 -2 6580 6306 3 1277 8201 61 1 0 chr15 90739234 90740257 -12754717 + L1_Mm LINE L1 4507 5530 -353 3 1277 321 26 0 0 chr15 90741400 90741438 -12753536 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1277 365 250 153 53 chr15 90741438 90741569 -12753405 - RSINE1 SINE B4 -20 145 2 3 1277 294 29 0 0 chr15 90742057 90742092 -12752882 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 1277 340 247 41 224 chr15 90742175 90742420 -12752554 + RLTR42-int LTR ERVK 1669 1868 -3654 3 1277 1604 204 138 8 chr15 90742804 90743165 -12751809 - MTD LTR MaLR 0 419 12 3 1277 272 293 56 75 chr15 90743284 90743391 -12751583 + ID_B1 SINE B4 5 109 -115 3 1277 201 74 0 0 chr15 90743528 90743555 -12751419 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 1277 208 139 0 0 chr15 90743566 90743602 -12751372 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 3 1277 241 317 0 0 chr15 90743764 90743824 -12751150 + (CATA)n Simple_repeat Simple_repeat 4 63 0 3 1277 345 324 73 25 chr15 90743856 90744150 -12750824 + L1MEg LINE L1 1803 2106 -4527 3 1277 386 305 133 53 chr15 90744216 90744517 -12750457 + L1M2 LINE L1 2046 2415 -3728 3 1277 2695 84 0 22 chr15 90744517 90744880 -12750094 + L1Md_F2 LINE L1 6216 6570 -12 3 1277 386 307 131 42 chr15 90744880 90745289 -12749685 + L1M2 LINE L1 2416 2859 -3284 3 1277 252 312 138 0 chr15 90745548 90745628 -12749346 + PB1 SINE Alu 1 91 -36 3 1277 1086 241 134 101 chr15 90745683 90746211 -12748763 - RMER4B LTR ERVK -24 561 3 3 1277 3063 72 40 15 chr15 90746217 90746614 -12748360 - MTB_Mm LTR MaLR 0 407 1 3 1277 578 262 23 52 chr15 90747254 90747427 -12747547 + Lx5 LINE L1 6872 7039 -11 3 1277 2779 220 8 77 chr15 90748345 90749005 -12745969 - RLTR18 LTR ERVK 0 616 3 3 1277 228 217 0 62 chr15 90749730 90749794 -12745180 - L1M2 LINE L1 -918 5225 5166 3 1277 270 296 11 22 chr15 90749885 90749975 -12744999 + HAL1 LINE L1 1655 1743 -764 3 1277 281 300 132 8 chr15 90750378 90750499 -12744475 + Tigger5 DNA MER2_type 99 234 -2172 3 1277 359 288 18 0 chr15 90750498 90750609 -12744365 + Tigger5 DNA MER2_type 2291 2403 -3 3 1277 698 296 82 31 chr15 90750609 90751011 -12743963 + MLT2B4 LTR ERVL 228 682 -35 3 1277 201 361 26 53 chr15 90752522 90752674 -12742300 - L2a LINE L2 -321 3105 2958 3 1277 2810 28 68 0 chr15 90752941 90753265 -12741709 + ORR1A1 LTR MaLR 1 346 0 3 1277 1177 202 26 4 chr15 90753281 90753515 -12741459 - RLTR42 LTR ERVK 0 239 1 3 1277 219 36 0 0 chr15 90753577 90753605 -12741369 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 1277 1281 280 50 25 chr15 90753605 90754045 -12740929 - RMER5 LTR ERV1 -15 519 69 4 1277 444 86 0 0 chr15 90754125 90754195 -12740779 + (CA)n Simple_repeat Simple_repeat 2 71 0 4 1277 694 261 62 27 chr15 90754219 90754443 -12740531 - L1_Rod LINE L1 -4 5843 5612 4 1277 1962 176 56 36 chr15 90755194 90755390 -12739584 - ORR1B2 LTR MaLR 0 367 166 4 1277 225 0 0 0 chr15 90755390 90755415 -12739559 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 1277 1962 176 56 36 chr15 90755415 90755578 -12739396 - ORR1B2 LTR MaLR -202 165 3 4 1277 974 128 6 81 chr15 90755999 90756160 -12738814 + B1_Mur4 SINE Alu 2 150 0 4 1277 735 12 0 0 chr15 90756166 90756250 -12738724 + (GAA)n Simple_repeat Simple_repeat 2 85 0 4 1277 586 317 78 38 chr15 90756251 90756727 -12738247 - MER52-int LTR ERV1 -973 6118 5624 4 1277 663 336 103 37 chr15 90757168 90757820 -12737154 - MER52-int LTR ERV1 -2002 5089 4395 4 1277 2495 105 12 0 chr15 90757947 90758270 -12736704 - ORR1A2 LTR MaLR 0 327 1 4 1277 26 30 0 0 chr15 90758340 90758373 -12736601 + AT_rich Low_complexity Low_complexity 1 33 0 4 1277 2419 82 3 0 chr15 90758982 90759299 -12735675 - ORR1A2 LTR MaLR -8 319 2 4 1277 277 55 0 69 chr15 90759568 90759626 -12735348 + (CAAAAA)n Simple_repeat Simple_repeat 3 56 0 4 1277 2434 61 20 0 chr15 90760041 90760334 -12734640 - L1_Mus1 LINE L1 0 6567 6269 4 1277 749 223 69 53 chr15 90760851 90761097 -12733877 - RLTR40 LTR ERVK -567 250 1 4 1277 202 152 67 17 chr15 90761180 90761240 -12733734 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 4 1277 686 12 12 0 chr15 90761416 90761499 -12733475 + (TAGA)n Simple_repeat Simple_repeat 2 85 0 4 1277 2008 120 3 73 chr15 90761501 90761842 -12733132 + ORR1A3 LTR MaLR 2 318 -8 4 1277 519 60 0 0 chr15 90761845 90761912 -12733062 + (CATA)n Simple_repeat Simple_repeat 4 70 0 4 1277 212 238 0 0 chr15 90761913 90761955 -12733019 + GA-rich Low_complexity Low_complexity 4 45 0 4 1277 232 239 153 18 chr15 90762121 90762232 -12732742 + L1MC LINE L1 3403 3528 -2618 4 1277 436 231 198 96 chr15 90762233 90762410 -12732564 + B3A SINE B2 4 198 0 4 1277 239 125 25 0 chr15 90762730 90762770 -12732204 - RMER19B LTR ERVK 0 902 862 4 1277 300 111 0 0 chr15 90763032 90763077 -12731897 + (T)n Simple_repeat Simple_repeat 1 45 0 4 1277 360 0 0 0 chr15 90763317 90763357 -12731617 + (TAAAA)n Simple_repeat Simple_repeat 2 41 0 4 1277 21 57 0 0 chr15 90764119 90764154 -12730820 + AT_rich Low_complexity Low_complexity 1 35 0 4 1277 714 119 0 17 chr15 90765558 90765678 -12729296 - Lx4A LINE L1 0 7058 6941 4 1277 388 291 36 9 chr15 90765796 90765907 -12729067 + PB1D10 SINE Alu 3 116 -1 4 1277 290 236 73 155 chr15 90766614 90766820 -12728154 - Charlie22a DNA MER1_type -81 410 222 4 1277 36 40 0 0 chr15 90767379 90767429 -12727545 + AT_rich Low_complexity Low_complexity 1 50 0 4 1277 213 39 0 0 chr15 90767491 90767517 -12727457 + (CACCAT)n Simple_repeat Simple_repeat 1 26 0 4 1277 948 232 168 86 chr15 90768260 90768646 -12726328 + MTD LTR MaLR 1 418 -1 4 1277 412 281 71 43 chr15 90768647 90768788 -12726186 + B1F2 SINE Alu 3 147 -2 4 1277 1052 247 49 28 chr15 90768887 90769212 -12725762 + Lx8 LINE L1 6896 7227 -246 4 1277 252 218 25 37 chr15 90769951 90770032 -12724942 + (CATATA)n Simple_repeat Simple_repeat 6 85 0 4 1277 222 91 0 0 chr15 90770232 90770265 -12724709 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 1277 896 148 14 14 chr15 90770595 90770739 -12724235 + B1_Mus1 SINE Alu 5 148 0 4 1277 683 108 0 10 chr15 90771592 90771695 -12723279 + Lx LINE L1 6541 6642 -12 4 1277 207 0 0 0 chr15 90771698 90771721 -12723253 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1277 1398 65 0 0 chr15 90773525 90773986 -12720988 + (TG)n Simple_repeat Simple_repeat 1 461 0 4 1277 695 244 28 28 chr15 90774004 90774185 -12720789 - B3A SINE B2 -16 182 2 4 1277 453 88 0 36 chr15 90775727 90775799 -12719175 + L1Md_F2 LINE L1 5536 5615 -676 4 1277 8588 45 4 7 chr15 90775799 90776797 -12718177 + L1Md_F2 LINE L1 5587 6581 -1 4 1277 29 28 0 0 chr15 90776798 90776834 -12718140 + AT_rich Low_complexity Low_complexity 1 36 0 4 1277 180 0 0 0 chr15 90776838 90776858 -12718116 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 4 1277 23 0 0 0 chr15 90777353 90777376 -12717598 + AT_rich Low_complexity Low_complexity 1 23 0 4 1277 189 147 0 0 chr15 90777517 90777551 -12717423 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 1277 400 226 193 57 chr15 90778064 90778256 -12716718 - B4A SINE B4 -18 274 57 4 1277 21 0 0 0 chr15 90778331 90778352 -12716622 + AT_rich Low_complexity Low_complexity 1 21 0 4 1277 510 61 0 0 chr15 90778604 90778670 -12716304 + (GGA)n Simple_repeat Simple_repeat 1 66 0 4 1277 23 33 0 0 chr15 90778939 90778969 -12716005 + AT_rich Low_complexity Low_complexity 1 30 0 4 1277 225 83 0 0 chr15 90779309 90779345 -12715629 + (A)n Simple_repeat Simple_repeat 1 36 0 4 1277 198 0 0 0 chr15 90779649 90779671 -12715303 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1277 449 293 29 50 chr15 90780381 90780521 -12714453 - B1F SINE Alu -11 138 2 4 1277 261 0 0 0 chr15 90781401 90781430 -12713544 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1277 197 33 33 0 chr15 90783266 90783296 -12711678 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 1277 262 324 0 14 chr15 90783809 90783881 -12711093 + B4A SINE B4 83 153 -139 4 1277 21 0 0 0 chr15 90784732 90784753 -12710221 + AT_rich Low_complexity Low_complexity 1 21 0 4 1277 1034 193 106 30 chr15 90785231 90785429 -12709545 + B3 SINE B2 1 213 -3 4 1277 223 259 0 0 chr15 90785473 90785527 -12709447 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1277 493 183 0 26 chr15 90785726 90785849 -12709125 + B1_Mur1 SINE Alu 2 149 0 4 1277 418 310 62 55 chr15 90786170 90786460 -12708514 + B4A SINE B4 1 292 0 4 1277 322 133 56 0 chr15 90786463 90786553 -12708421 + (CA)n Simple_repeat Simple_repeat 2 96 0 4 1277 209 139 23 0 chr15 90787396 90787439 -12707535 + G-rich Low_complexity Low_complexity 1 44 0 4 1277 393 173 14 21 chr15 90787437 90787579 -12707395 + (CAGAGA)n Simple_repeat Simple_repeat 2 142 0 4 1277 304 236 19 9 chr15 90787579 90787586 -12707388 + (CAGA)n Simple_repeat Simple_repeat 1 7 0 4 1277 189 74 0 0 chr15 90787586 90787613 -12707361 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1277 304 236 19 9 chr15 90787613 90787712 -12707262 + (CAGA)n Simple_repeat Simple_repeat 4 103 0 4 1277 226 0 0 56 chr15 90787852 90787888 -12707086 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1277 32 32 0 46 chr15 90789236 90789301 -12705673 + AT_rich Low_complexity Low_complexity 1 62 0 4 1277 212 149 92 26 chr15 90789302 90789378 -12705596 + (TTTAA)n Simple_repeat Simple_repeat 3 83 0 4 1277 728 231 69 23 chr15 90789870 90790043 -12704931 + B3A SINE B2 2 182 -16 4 1277 837 221 30 45 chr15 90791343 90791542 -12703432 + ORR1D2 LTR MaLR 1 196 -174 4 1277 3406 72 23 9 chr15 90791991 90792425 -12702549 + L1Md_F2 LINE L1 6132 6571 -11 4 1277 402 338 89 50 chr15 90792427 90792927 -12702047 + MER68 LTR ERVL 1 569 -38 4 1277 243 0 0 0 chr15 90793009 90793036 -12701938 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 4 1277 372 297 12 31 chr15 90793785 90793948 -12701026 + GA-rich Low_complexity Low_complexity 2 161 0 4 1277 564 15 0 0 chr15 90794135 90794200 -12700774 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 1277 1171 83 14 0 chr15 90794295 90794440 -12700534 + B1_Mus1 SINE Alu 2 148 0 4 1277 398 45 90 0 chr15 90794440 90794529 -12700445 + (CAAAA)n Simple_repeat Simple_repeat 3 99 0 4 1277 23 78 0 0 chr15 90794967 90795018 -12699956 + AT_rich Low_complexity Low_complexity 1 51 0 4 1277 993 168 28 6 chr15 90797215 90797395 -12697579 + B2_Mm2 SINE B2 1 184 -11 4 1277 422 280 25 25 chr15 90797475 90797596 -12697378 + ID_B1 SINE B4 104 224 0 4 1277 1493 225 177 30 chr15 90797952 90798443 -12696531 + RMER2 LTR ERV1 1 563 -4 4 1277 392 273 61 0 chr15 90799479 90799578 -12695396 + RSINE1 SINE B4 51 155 -10 4 1277 252 86 0 0 chr15 90799598 90799633 -12695341 + (A)n Simple_repeat Simple_repeat 1 35 0 4 1277 1327 41 0 0 chr15 90800023 90800170 -12694804 - B1_Mus2 SINE Alu 0 147 1 4 1277 327 104 0 0 chr15 90800477 90800525 -12694449 + (T)n Simple_repeat Simple_repeat 1 48 0 4 1277 248 312 0 0 chr15 90800573 90800637 -12694337 + MIR SINE MIR 78 141 -121 4 1277 240 122 0 0 chr15 90802151 90802192 -12692782 + (TCC)n Simple_repeat Simple_repeat 2 42 0 4 1277 810 153 11 6 chr15 90802306 90802484 -12692490 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 1277 226 138 35 0 chr15 90802499 90802557 -12692417 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1277 366 332 98 33 chr15 90802566 90802781 -12692193 - B4A SINE B4 -1 291 63 4 1277 182 233 45 23 chr15 90804529 90804573 -12690401 - L2 LINE L2 -3323 96 52 4 1277 360 0 0 0 chr15 90804917 90804957 -12690017 + (TCC)n Simple_repeat Simple_repeat 1 40 0 4 1277 28 48 0 0 chr15 90806841 90806883 -12688091 + AT_rich Low_complexity Low_complexity 1 42 0 4 1277 630 174 0 0 chr15 90808561 90808699 -12686275 + (TG)n Simple_repeat Simple_repeat 2 139 0 4 1277 408 311 22 22 chr15 90808704 90808842 -12686132 - RSINE1 SINE B4 0 165 28 4 1277 2147 152 9 3 chr15 90809537 90809861 -12685113 + ORR1A3 LTR MaLR 1 326 0 4 1277 241 268 127 78 chr15 90811947 90812113 -12682861 + MIRb SINE MIR 14 187 -81 4 1277 2662 93 57 23 chr15 90812476 90812861 -12682113 - Lx2 LINE L1 0 6997 6600 4 1277 390 21 0 0 chr15 90814010 90814057 -12680917 + (TC)n Simple_repeat Simple_repeat 1 47 0 4 1277 943 140 17 45 chr15 90814507 90814686 -12680288 + B2_Mm2 SINE B2 14 187 -8 4 1277 353 164 0 15 chr15 90814679 90814747 -12680227 - RLTR40 LTR ERVK -574 243 177 5 1277 245 312 13 13 chr15 90815282 90815360 -12679614 + ID4 SINE ID 6 83 0 5 1277 531 0 0 0 chr15 90815503 90815562 -12679412 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 1277 3778 92 11 28 chr15 90816676 90817214 -12677760 - L1_Mus3 LINE L1 0 6638 6110 5 1277 385 116 87 0 chr15 90817249 90817318 -12677656 - L1Md_F2 LINE L1 -1 6581 6507 5 1277 1322 54 84 0 chr15 90817335 90817502 -12677472 - B2_Mm2 SINE B2 -14 181 1 5 1277 979 227 9 14 chr15 90817636 90817846 -12677128 + B3 SINE B2 2 210 -6 5 1277 24 32 0 0 chr15 90817846 90817877 -12677097 + AT_rich Low_complexity Low_complexity 1 31 0 5 1277 356 225 0 14 chr15 90818497 90818569 -12676405 + B4A SINE B4 9 79 -213 5 1277 229 268 46 58 chr15 90818817 90818904 -12676070 + PB1D10 SINE Alu 29 114 -3 5 1277 335 247 52 107 chr15 90818912 90818963 -12676011 - B4A SINE B4 -28 264 133 5 1277 658 192 46 8 chr15 90818963 90819094 -12675880 - B1_Mur1 SINE Alu -5 144 9 5 1277 335 247 52 107 chr15 90819094 90819116 -12675858 - B4A SINE B4 -28 132 70 5 1277 28 0 0 0 chr15 90820210 90820238 -12674736 + AT_rich Low_complexity Low_complexity 1 28 0 5 1277 862 189 0 13 chr15 90820701 90820851 -12674123 + B1_Mur3 SINE Alu 2 149 0 5 1277 235 94 0 0 chr15 90820853 90820885 -12674089 + (GAAA)n Simple_repeat Simple_repeat 4 35 0 5 1277 743 168 7 0 chr15 90820885 90821028 -12673946 + GA-rich Low_complexity Low_complexity 4 147 0 5 1277 380 20 20 0 chr15 90821031 90821080 -12673894 + (GGGAA)n Simple_repeat Simple_repeat 1 50 0 5 1277 414 0 0 0 chr15 90822706 90822752 -12672222 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1277 360 342 58 0 chr15 90823974 90824094 -12670880 + B1F1 SINE Alu 1 127 -22 5 1277 180 0 0 0 chr15 90825076 90825096 -12669878 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1277 294 315 10 80 chr15 90825544 90825644 -12669330 - RSINE1 SINE B4 -5 160 68 5 1277 254 130 54 36 chr15 90826449 90826505 -12668469 - B1_Mur1 SINE Alu -19 130 74 5 1277 341 240 26 130 chr15 90826482 90826597 -12668377 - B1_Mur4 SINE Alu -24 126 24 5 1277 205 284 30 0 chr15 90826797 90826864 -12668110 + CT-rich Low_complexity Low_complexity 4 72 0 5 1277 206 206 0 0 chr15 90826801 90826835 -12668139 + C-rich Low_complexity Low_complexity 6 39 0 5 1277 227 151 38 0 chr15 90826861 90826914 -12668060 + T-rich Low_complexity Low_complexity 4 58 0 5 1277 649 234 23 104 chr15 90826941 90827161 -12667813 - L1MA4 LINE L1 -394 5906 5705 5 1277 432 0 0 0 chr15 90827230 90827278 -12667696 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1277 335 210 0 0 chr15 90827343 90827405 -12667569 - RSINE1 SINE B4 -91 74 13 5 1277 324 290 41 62 chr15 90828926 90828949 -12666025 - Charlie7a DNA MER1_type -46 226 204 5 1277 315 0 0 0 chr15 90828949 90828984 -12665990 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1277 324 290 41 62 chr15 90828984 90829155 -12665819 - Charlie7a DNA MER1_type -69 203 37 5 1277 512 290 186 1 chr15 90829908 90830091 -12664883 + B3A SINE B2 3 216 0 5 1277 747 121 38 8 chr15 90830160 90830293 -12664681 + Lx2B LINE L1 6849 6985 -15 5 159 584 304 0 0 chr15 90832870 90833005 -12661969 + B1_Mur3 SINE Alu 3 137 -12 5 1278 1142 80 0 6 chr15 90833005 90833169 -12661805 + (TAGA)n Simple_repeat Simple_repeat 4 166 0 5 1278 272 295 0 0 chr15 90833185 90833246 -12661728 + (TGGA)n Simple_repeat Simple_repeat 4 64 0 5 1278 320 323 74 45 chr15 90834328 90834683 -12660291 + LTR40b LTR ERVL 111 461 -1 5 1278 788 210 11 42 chr15 90835262 90835451 -12659523 - B3A SINE B2 -15 183 1 5 1278 351 0 0 0 chr15 90835615 90835654 -12659320 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1278 256 322 16 48 chr15 90836938 90837062 -12657912 + ID_B1 SINE B4 105 224 0 5 1278 323 303 188 10 chr15 90837241 90837438 -12657536 + MLT1D LTR MaLR 273 504 -1 5 1278 230 330 18 0 chr15 90837506 90837615 -12657359 - MER94 DNA AcHobo -11 123 13 5 1278 228 281 40 30 chr15 90837854 90837953 -12657021 + MER5B DNA MER1_type 53 152 -26 5 1278 737 219 184 6 chr15 90838105 90838284 -12656690 + B3 SINE B2 1 211 -5 5 1278 237 316 13 38 chr15 90838319 90838398 -12656576 + B4 SINE B4 209 285 -7 5 1278 180 0 0 0 chr15 90839245 90839265 -12655709 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 5 1278 708 119 0 0 chr15 90839478 90839587 -12655387 + (GGAA)n Simple_repeat Simple_repeat 1 109 0 5 1278 243 0 0 0 chr15 90840212 90840239 -12654735 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1278 784 286 47 9 chr15 90840335 90840547 -12654427 + B4A SINE B4 8 227 -65 5 1278 399 106 0 0 chr15 90840604 90840670 -12654304 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 1278 385 285 128 11 chr15 90840708 90840896 -12654078 - MLT1E1A LTR MaLR -127 553 344 5 1278 266 371 87 24 chr15 90842185 90842392 -12652582 + MLT1J LTR MaLR 292 511 -1 5 1278 702 321 109 17 chr15 90842546 90843006 -12651968 - RMER5 LTR ERV1 0 534 33 5 1278 2245 147 68 12 chr15 90843060 90843459 -12651515 - MTC LTR MaLR 0 421 1 5 1278 1246 55 0 12 chr15 90844273 90844440 -12650534 + B2_Mm2 SINE B2 3 167 -28 5 1278 272 276 0 65 chr15 90845760 90845853 -12649121 + MT2B LTR ERVL 178 264 -337 5 1278 785 75 0 0 chr15 90845770 90845877 -12649097 + B1_Mus1 SINE Alu 31 137 -11 5 1278 216 0 0 0 chr15 90845877 90845901 -12649073 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1278 449 201 255 0 chr15 90845901 90846050 -12648924 + B3 SINE B2 30 216 0 5 1278 366 242 23 70 chr15 90846263 90846283 -12648691 + MT2B LTR ERVL 147 160 -441 5 1278 583 189 36 0 chr15 90846283 90846394 -12648580 + B1_Mur1 SINE Alu 3 117 -32 5 1278 689 249 16 37 chr15 90846401 90846589 -12648385 - B3A SINE B2 0 198 15 5 1278 234 0 0 0 chr15 90847576 90847602 -12647372 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 1278 275 297 135 0 chr15 90848592 90848703 -12646271 + LTR16D LTR ERVL 526 651 0 5 1278 342 0 0 0 chr15 90848723 90848761 -12646213 + (TTG)n Simple_repeat Simple_repeat 2 39 0 5 1278 378 0 0 0 chr15 90848842 90848884 -12646090 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1278 374 325 17 75 chr15 90849731 90849904 -12645070 + RSINE1 SINE B4 3 165 0 5 1278 265 267 0 99 chr15 90849951 90850121 -12644853 + PB1D9 SINE Alu 6 143 -6 5 1278 389 306 23 6 chr15 90850147 90850321 -12644653 + Lx9 LINE L1 7319 7495 -149 5 1278 787 10 0 20 chr15 90850795 90850897 -12644077 + (CA)n Simple_repeat Simple_repeat 2 101 0 5 1278 1566 297 92 18 chr15 90850897 90851836 -12643138 - Lx7 LINE L1 -410 7286 6222 5 1278 622 229 135 39 chr15 90851923 90852182 -12642792 + RMER10A LTR ERVL 131 414 -28 5 1278 186 336 0 21 chr15 90852748 90852859 -12642115 + MIRb SINE MIR 41 147 -129 5 1278 809 165 18 64 chr15 90853475 90853679 -12641295 + RMER17C LTR ERVK 1 195 -215 5 1278 410 53 18 0 chr15 90853679 90853736 -12641238 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 5 1278 809 165 18 64 chr15 90853736 90853751 -12641223 + RMER17C LTR ERVK 196 210 -200 5 1278 1542 63 16 0 chr15 90854099 90854290 -12640684 - B2_Mm2 SINE B2 0 195 2 5 1278 207 259 52 0 chr15 90855670 90855728 -12639246 + L2 LINE L2 1294 1354 -2065 5 1278 1148 226 67 14 chr15 90855891 90856174 -12638800 - MTD LTR MaLR -121 298 1 5 1278 263 271 32 32 chr15 90856873 90857006 -12637968 + MIRc SINE MIR 60 200 -68 5 1278 396 0 0 0 chr15 90857585 90857629 -12637345 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 1278 2140 113 9 20 chr15 90857750 90858094 -12636880 - ORR1B2 LTR MaLR -1 366 27 5 1278 263 257 26 39 chr15 90858095 90858172 -12636802 - ORR1B2 LTR MaLR -265 102 27 5 1278 375 224 20 30 chr15 90858173 90858274 -12636700 - ORR1B2 LTR MaLR -265 102 3 5 1278 29 0 0 0 chr15 90858748 90858777 -12636197 + AT_rich Low_complexity Low_complexity 1 29 0 5 1278 819 54 0 9 chr15 90859810 90859923 -12635051 + B1_Mm SINE Alu 27 138 -9 5 1278 1145 126 0 5 chr15 90860033 90860224 -12634750 - B2_Mm2 SINE B2 0 195 6 5 1278 1396 197 85 37 chr15 90860274 90860627 -12634347 + ORR1D1 LTR MaLR 5 374 0 5 1278 399 297 40 7 chr15 90860775 90860924 -12634050 + L1M5 LINE L1 2556 2709 -3437 5 1278 460 297 25 25 chr15 90860930 90861092 -12633882 + ORR1E LTR MaLR 31 192 -167 5 1278 2678 139 9 5 chr15 90861175 90861594 -12633380 - MTC LTR MaLR 0 421 1 5 1278 246 208 0 36 chr15 90862188 90862243 -12632731 - PB1D10 SINE Alu 0 117 65 5 1278 653 224 0 81 chr15 90862439 90862599 -12632375 - B1_Mur1 SINE Alu 0 149 3 5 1278 760 154 7 7 chr15 90865331 90865468 -12629506 - B1_Mur3 SINE Alu -1 148 12 5 1278 988 53 8 0 chr15 90865952 90866085 -12628889 + BGLII LTR ERVK 1 134 -287 5 1278 1313 66 6 0 chr15 90866085 90866267 -12628707 - B2_Mm1a SINE B2 -3 190 8 5 1278 1934 74 20 0 chr15 90866266 90866565 -12628409 + BGLII LTR ERVK 117 421 0 5 1278 219 69 0 0 chr15 90866872 90866901 -12628073 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1278 21 0 0 0 chr15 90867430 90867451 -12627523 + AT_rich Low_complexity Low_complexity 1 21 0 5 1278 1319 60 63 24 chr15 90867808 90868013 -12626961 - ORR1A0 LTR MaLR 0 346 134 5 1278 253 227 29 29 chr15 90868016 90868084 -12626890 - ID4_ SINE ID -14 69 2 5 1278 2542 174 58 75 chr15 90868263 90868834 -12626140 + RLTR31_Mm LTR ERVK 1 561 0 5 1278 361 232 12 0 chr15 90870033 90870115 -12624859 + ORR1D1 LTR MaLR 3 85 -289 6 1278 799 10 20 0 chr15 90870115 90870215 -12624759 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 6 1278 636 200 124 45 chr15 90870216 90870263 -12624711 + ORR1D1 LTR MaLR 183 245 -129 6 1278 203 0 37 0 chr15 90870263 90870290 -12624684 + (CCTG)n Simple_repeat Simple_repeat 2 29 0 6 1278 636 200 124 45 chr15 90870290 90870420 -12624554 + ORR1D1 LTR MaLR 246 374 0 6 1278 513 0 0 0 chr15 90871171 90871228 -12623746 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 1278 224 224 29 39 chr15 90871644 90871746 -12623228 + (CATA)n Simple_repeat Simple_repeat 1 101 0 6 1278 243 0 0 0 chr15 90871752 90871779 -12623195 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1278 1091 51 65 0 chr15 90873627 90873765 -12621209 + B1_Mus1 SINE Alu 2 148 0 6 1278 471 48 0 0 chr15 90874187 90874249 -12620725 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 1278 994 118 0 0 chr15 90874449 90874585 -12620389 + B1_Mus2 SINE Alu 1 136 -11 6 1278 293 236 0 75 chr15 90875197 90875371 -12619603 + CT-rich Low_complexity Low_complexity 6 166 0 6 1278 612 133 133 52 chr15 90875633 90875768 -12619206 + B1_Mur3 SINE Alu 4 149 0 6 1278 339 130 0 0 chr15 90876655 90876709 -12618265 + (TAA)n Simple_repeat Simple_repeat 2 55 0 6 1278 705 202 263 3 chr15 90877029 90877362 -12617612 + MTD LTR MaLR 1 419 0 6 1278 287 211 31 82 chr15 90877489 90877587 -12617387 + PB1D9 SINE Alu 28 120 0 6 1278 1001 110 0 0 chr15 90877640 90877785 -12617189 + B1_Mus2 SINE Alu 1 145 -2 6 1278 351 0 0 0 chr15 90877785 90877824 -12617150 + (TAA)n Simple_repeat Simple_repeat 2 40 0 6 1278 342 0 0 0 chr15 90878541 90878579 -12616395 + (A)n Simple_repeat Simple_repeat 1 38 0 6 1278 1133 68 7 13 chr15 90878929 90878940 -12616034 - B1_Mus1 SINE Alu 0 148 139 6 1278 306 0 0 0 chr15 90878940 90878974 -12616000 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1278 1133 68 7 13 chr15 90878974 90879111 -12615863 - B1_Mus1 SINE Alu -10 138 1 6 1278 273 163 0 0 chr15 90880179 90880228 -12614746 + (CGG)n Simple_repeat Simple_repeat 2 50 0 6 1278 25 65 0 0 chr15 90880382 90880428 -12614546 + GC_rich Low_complexity Low_complexity 1 46 0 6 1278 360 350 45 93 chr15 90881450 90881803 -12613171 - MER102b DNA MER1_type -5 336 1 6 1278 289 326 39 31 chr15 90882374 90882607 -12612367 + L2a LINE L2 2934 3172 -215 6 1278 575 313 66 20 chr15 90882695 90882998 -12611976 - MER45B DNA Tip100 -70 970 654 6 1278 2112 181 89 84 chr15 90883131 90883657 -12611317 + RLTR24 LTR ERV1 1 529 0 6 1278 353 279 72 22 chr15 90883715 90883854 -12611120 + B3A SINE B2 65 210 -6 6 1278 388 343 96 48 chr15 90883979 90884270 -12610704 - MER45B DNA Tip100 -695 345 41 6 1278 238 243 93 13 chr15 90884714 90884789 -12610185 - MLT1A1 LTR MaLR -46 362 282 6 1278 350 111 48 0 chr15 90886003 90886066 -12608908 + T-rich Low_complexity Low_complexity 2 67 0 6 1278 245 98 0 24 chr15 90887813 90887855 -12607119 + (GGGA)n Simple_repeat Simple_repeat 1 41 0 6 1278 429 158 0 0 chr15 90888451 90888552 -12606422 + (TG)n Simple_repeat Simple_repeat 2 102 0 6 1278 226 345 16 109 chr15 90888988 90889048 -12605926 + MLT1A LTR MaLR 192 249 -125 6 1278 2907 82 20 2 chr15 90889048 90889441 -12605533 + MTB LTR MaLR 1 400 0 6 1278 226 345 16 109 chr15 90889441 90889501 -12605473 + MLT1A LTR MaLR 250 308 -66 6 1278 570 221 172 44 chr15 90889501 90889681 -12605293 + B3 SINE B2 1 203 -13 6 1278 226 345 16 109 chr15 90889681 90889751 -12605223 + MLT1A LTR MaLR 309 365 -9 6 1278 290 274 53 0 chr15 90890128 90890241 -12604733 + MLT-int LTR MaLR 1413 1531 -204 6 1278 1809 342 94 31 chr15 90890364 90891506 -12603468 - Lx8 LINE L1 -39 7434 6200 6 1278 2797 61 15 12 chr15 90891608 90892009 -12602965 - MTB_Mm LTR MaLR 0 407 6 6 1278 560 86 0 0 chr15 90892497 90892578 -12602396 + B2_Mm2 SINE B2 2 82 -113 6 1278 227 362 0 0 chr15 90892578 90892591 -12602383 + RSINE1 SINE B4 3 96 -69 6 1278 452 303 13 7 chr15 90892795 90892948 -12602026 - Tigger7 DNA MER2_type -1 2490 2337 6 1278 1161 187 20 5 chr15 90893042 90893241 -12601733 + B3 SINE B2 1 202 -14 6 1278 1405 82 16 0 chr15 90893243 90893425 -12601549 - B2_Mm2 SINE B2 -10 185 1 6 1278 473 106 7 0 chr15 90893517 90893590 -12601384 + L1_Mur3 LINE L1 3709 3803 -2340 6 1278 424 250 118 0 chr15 90893611 90893747 -12601227 + B3A SINE B2 2 153 -45 6 1278 180 0 0 0 chr15 90894681 90894701 -12600273 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 1278 1060 102 0 0 chr15 90895905 90896052 -12598922 + B1_Mus1 SINE Alu 1 147 -1 6 1278 951 109 0 0 chr15 90896412 90896559 -12598415 + (CA)n Simple_repeat Simple_repeat 2 148 0 6 1278 601 231 14 56 chr15 90896580 90896722 -12598252 - RSINE1 SINE B4 -26 139 4 6 1278 276 30 0 0 chr15 90897083 90897116 -12597858 + (TAA)n Simple_repeat Simple_repeat 2 34 0 6 1278 414 313 84 30 chr15 90897395 90897632 -12597342 + MLT2C1 LTR ERVL 143 392 -5 6 1278 521 307 99 65 chr15 90897795 90898167 -12596807 + MLT1A1 LTR MaLR 23 407 -1 6 1278 21 0 0 0 chr15 90898450 90898471 -12596503 + AT_rich Low_complexity Low_complexity 1 21 0 6 1278 316 298 54 71 chr15 90898836 90898948 -12596026 - PB1D7 SINE Alu -3 117 8 6 1278 577 211 0 0 chr15 90899109 90899218 -12595756 + B3 SINE B2 1 109 -107 6 1278 651 257 161 15 chr15 90899344 90899668 -12595306 + L1_Mur3 LINE L1 5087 5457 -423 6 1278 2722 225 21 18 chr15 90899697 90899981 -12594993 - Lx6 LINE L1 -189 7271 6987 6 1278 2526 164 49 5 chr15 90899981 90900389 -12594585 - RMER4A LTR ERVK 0 466 40 6 1278 189 0 0 0 chr15 90900389 90900410 -12594564 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 6 1278 2526 164 49 5 chr15 90900410 90900447 -12594527 - RMER4A LTR ERVK -427 39 1 6 1278 2722 225 21 18 chr15 90900447 90900724 -12594250 - Lx6 LINE L1 -474 6986 6708 6 1278 336 48 0 0 chr15 90900724 90900766 -12594208 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 6 1278 365 289 22 0 chr15 90900808 90900898 -12594076 + Lx7 LINE L1 7193 7284 -412 6 1278 405 0 0 0 chr15 90900929 90900974 -12594000 + (TC)n Simple_repeat Simple_repeat 2 46 0 6 1278 861 52 0 0 chr15 90900974 90901088 -12593886 + (TG)n Simple_repeat Simple_repeat 2 116 0 6 1278 2175 131 16 0 chr15 90901107 90901428 -12593546 + ORR1A3 LTR MaLR 1 326 0 6 1278 207 0 0 0 chr15 90901453 90901476 -12593498 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 6 1278 28 48 0 0 chr15 90901557 90901599 -12593375 + AT_rich Low_complexity Low_complexity 1 42 0 6 1278 975 258 46 20 chr15 90901614 90901926 -12593048 + Lx8 LINE L1 5429 5730 -117 6 1278 249 114 23 0 chr15 90901944 90901988 -12592986 - Lx5 LINE L1 0 7050 7006 6 1278 355 268 45 50 chr15 90901988 90902216 -12592758 + Lx8 LINE L1 5755 5982 -1662 6 1278 1318 139 0 5 chr15 90902362 90902586 -12592388 - RMER4A LTR ERVK -243 223 1 6 1278 752 146 36 12 chr15 90902643 90902809 -12592165 + (TATG)n Simple_repeat Simple_repeat 3 172 0 6 1278 222 37 0 0 chr15 90903354 90903381 -12591593 + (CATA)n Simple_repeat Simple_repeat 2 28 0 6 1278 248 68 16 63 chr15 90903840 90903903 -12591071 + (TTTG)n Simple_repeat Simple_repeat 1 60 0 6 1278 1225 48 0 0 chr15 90903903 90904049 -12590925 - B1_Mus1 SINE Alu -1 147 2 6 1278 1168 217 140 92 chr15 90904072 90904580 -12590394 + RLTR20C LTR ERVK 1 532 -2 6 1278 434 252 0 0 chr15 90906676 90906775 -12588199 - RSINE1 SINE B4 -65 100 2 6 1278 23 0 0 0 chr15 90906847 90906870 -12588104 + AT_rich Low_complexity Low_complexity 1 23 0 6 1278 1321 106 11 0 chr15 90907513 90907701 -12587273 + B2_Mm1t SINE B2 2 191 -2 6 1278 1938 247 186 15 chr15 90908953 90909102 -12585872 + Lx8 LINE L1 6582 6742 -731 6 1278 378 0 0 0 chr15 90909102 90909144 -12585830 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1278 1938 247 186 15 chr15 90909144 90909193 -12585781 + Lx8 LINE L1 6743 6810 -663 6 1278 2952 130 80 8 chr15 90909193 90909682 -12585292 + RLTR28 LTR ERVL 1 524 0 6 1278 1938 247 186 15 chr15 90909682 90910091 -12584883 + Lx8 LINE L1 6811 7293 -180 6 1278 203 176 0 0 chr15 90910148 90910182 -12584792 + (CAT)n Simple_repeat Simple_repeat 2 35 0 6 1278 48 32 0 0 chr15 90910288 90910350 -12584624 + AT_rich Low_complexity Low_complexity 1 62 0 6 1278 258 32 0 0 chr15 90910598 90910629 -12584345 + (T)n Simple_repeat Simple_repeat 1 31 0 6 1278 38707 31 1 1 chr15 90910772 90917833 -12577141 - L1Md_T LINE L1 0 6585 1 6 1278 34 0 0 0 chr15 90918387 90918421 -12576553 + AT_rich Low_complexity Low_complexity 1 34 0 6 1278 234 301 215 0 chr15 90919464 90919557 -12575417 - PB1D10 SINE Alu 0 117 5 6 1278 1951 202 80 4 chr15 90920462 90920925 -12574049 + Lx9 LINE L1 7146 7643 -1 6 1278 734 193 89 75 chr15 90920931 90921144 -12573830 + B3 SINE B2 1 216 0 6 1278 26 64 0 0 chr15 90921214 90921261 -12573713 + AT_rich Low_complexity Low_complexity 1 47 0 6 1278 477 0 0 0 chr15 90921883 90921936 -12573038 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1278 351 0 0 0 chr15 90921936 90921974 -12573000 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 1278 1221 110 0 0 chr15 90922333 90922646 -12572328 + (TC)n Simple_repeat Simple_repeat 1 313 0 6 1278 414 134 0 0 chr15 90923322 90923389 -12571585 + (TTA)n Simple_repeat Simple_repeat 3 69 0 6 1278 332 275 103 27 chr15 90923396 90923542 -12571432 - MLT1A0 LTR MaLR 0 365 209 6 1278 2070 226 42 24 chr15 90923964 90924623 -12570351 + Lx9 LINE L1 5388 6108 -1536 6 1278 2105 284 122 27 chr15 90924708 90924863 -12570111 + Lx9 LINE L1 6358 6527 -1117 6 1278 1639 181 78 26 chr15 90924863 90925210 -12569764 - ORR1B2 LTR MaLR -2 365 1 6 1278 2105 284 122 27 chr15 90925210 90926004 -12568970 + Lx9 LINE L1 6528 7396 -248 6 1278 354 45 0 0 chr15 90926093 90926137 -12568837 + (TATG)n Simple_repeat Simple_repeat 1 44 0 6 1278 1596 218 29 50 chr15 90927068 90927450 -12567524 - ORR1D1 LTR MaLR 0 374 1 6 1278 610 288 65 11 chr15 90927521 90927707 -12567267 + B3A SINE B2 1 196 -2 6 1278 216 0 0 0 chr15 90929378 90929402 -12565572 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 6 1278 522 327 91 67 chr15 90929445 90929730 -12565244 + B4A SINE B4 1 292 0 6 1278 1458 276 26 58 chr15 90930795 90931034 -12563940 - L1_Mur3 LINE L1 -494 5386 5159 6 1278 1185 48 7 0 chr15 90931034 90931180 -12563794 + B1_Mus1 SINE Alu 2 148 0 7 1278 1458 276 26 58 chr15 90931180 90931598 -12563376 - L1_Mur3 LINE L1 -722 5158 4750 6 1278 280 174 0 0 chr15 90931609 90931655 -12563319 + MTE2a LTR MaLR 1 46 -333 7 1278 1733 301 137 40 chr15 90931682 90932288 -12562686 + Lx8 LINE L1 5610 6281 -1192 7 1278 2236 138 114 5 chr15 90932288 90932666 -12562308 + MTC LTR MaLR 1 419 -2 7 1278 1733 301 137 40 chr15 90932666 90932960 -12562014 + Lx8 LINE L1 6282 6597 -876 7 1278 1284 57 109 0 chr15 90933023 90933198 -12561776 - B2_Mm2 SINE B2 -1 194 1 7 1278 1513 210 59 47 chr15 90933200 90933609 -12561365 - MTD LTR MaLR -5 414 1 7 1278 227 310 138 0 chr15 90933628 90933715 -12561259 + Lx8 LINE L1 6633 6731 -742 7 1278 662 165 50 0 chr15 90933723 90933844 -12561130 - B1_Mus2 SINE Alu -17 130 4 7 1278 695 235 144 5 chr15 90933846 90934047 -12560927 + Lx8 LINE L1 6803 7031 -442 7 1278 1201 61 0 0 chr15 90934047 90934194 -12560780 + B1_Mus2 SINE Alu 1 147 0 7 1278 360 0 0 0 chr15 90934639 90934679 -12560295 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1278 23 0 0 0 chr15 90934684 90934707 -12560267 + AT_rich Low_complexity Low_complexity 1 23 0 7 1278 393 22 0 0 chr15 90935026 90935072 -12559902 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1278 715 349 85 0 chr15 90935677 90936181 -12558793 + Lx8 LINE L1 6927 7473 0 7 1278 267 299 20 10 chr15 90936324 90936422 -12558552 + L1_Mur3 LINE L1 5314 5412 -468 7 1278 240 163 0 0 chr15 90936514 90936557 -12558417 + (ATGGTG)n Simple_repeat Simple_repeat 4 46 0 7 1278 233 0 0 156 chr15 90936560 90936669 -12558305 + (CAAGG)n Simple_repeat Simple_repeat 2 93 0 7 1278 241 217 0 0 chr15 90936672 90936718 -12558256 + (CCG)n Simple_repeat Simple_repeat 2 47 0 7 1278 669 348 91 25 chr15 90936867 90937139 -12557835 - L1M2 LINE L1 -868 5275 4963 7 1278 648 0 0 0 chr15 90937139 90937211 -12557763 + (GA)n Simple_repeat Simple_repeat 1 72 0 7 1278 669 348 91 25 chr15 90937211 90937566 -12557408 - L1M2 LINE L1 -1181 4962 4608 7 1278 237 308 22 0 chr15 90937734 90937825 -12557149 - L1_Mur3 LINE L1 -1549 4328 4236 7 1278 467 213 15 42 chr15 90937828 90937964 -12557010 - MTD LTR MaLR -7 414 277 7 1278 24 53 0 0 chr15 90937995 90938033 -12556941 + AT_rich Low_complexity Low_complexity 1 38 0 7 1278 941 264 0 0 chr15 90938039 90938255 -12556719 - B3 SINE B2 0 216 1 7 1278 3584 295 32 16 chr15 90938333 90939405 -12555569 - Lx7 LINE L1 -395 7301 6213 7 1278 4975 214 44 14 chr15 90939378 90940632 -12554342 - L1_Mur3 LINE L1 -3056 2824 1534 7 1278 307 231 15 0 chr15 90940646 90940711 -12554263 + B1_Mus2 SINE Alu 45 110 -37 7 1278 23 33 0 0 chr15 90940725 90940755 -12554219 + AT_rich Low_complexity Low_complexity 1 30 0 7 1278 1306 265 41 77 chr15 90940763 90941090 -12553884 + RMER5 LTR ERV1 23 329 -205 7 1278 1369 81 43 0 chr15 90941090 90941275 -12553699 - B2_Mm2 SINE B2 -2 193 1 7 1278 1306 265 41 77 chr15 90941275 90941478 -12553496 + RMER5 LTR ERV1 330 534 0 7 1278 796 239 78 101 chr15 90941538 90941975 -12552999 + RMER10A LTR ERVL 12 438 -4 7 1278 333 0 0 0 chr15 90943215 90943252 -12551722 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1278 430 294 91 50 chr15 90943809 90944149 -12550825 + L1MB2 LINE L1 5544 5897 -274 7 1278 3720 35 5 2 chr15 90945288 90945723 -12549251 + RLTR10C LTR ERVK 1 436 0 7 1278 2629 61 0 0 chr15 90945723 90946066 -12548908 + MMERVK10C-int LTR ERVK 1 343 -7238 7 1278 675 194 12 66 chr15 90946064 90946356 -12548618 + MMERVK10C-int LTR ERVK 729 952 -6629 7 1278 597 235 131 53 chr15 90946446 90946816 -12548158 + MMERVK10C-int LTR ERVK 312 668 -5469 7 1278 306 155 17 0 chr15 90946816 90946874 -12548100 + MMERVK10C-int LTR ERVK 1721 1779 -5627 7 1278 367 95 0 0 chr15 90946881 90946944 -12548030 + MMERVK10C-int LTR ERVK 1885 1947 -5634 7 1278 42424 17 5 0 chr15 90946950 90951956 -12543018 + MMERVK10C-int LTR ERVK 2552 7581 0 7 1278 3720 35 5 2 chr15 90951956 90952391 -12542583 + RLTR10C LTR ERVK 1 436 0 7 1278 251 350 23 75 chr15 90952683 90952816 -12542158 + PB1 SINE Alu 2 127 0 7 1278 1284 262 19 58 chr15 90952845 90953222 -12541752 - ORR1D2 LTR MaLR -4 366 5 7 1278 622 211 88 0 chr15 90953752 90953866 -12541108 + RSINE1 SINE B4 18 141 -24 7 1278 676 238 108 10 chr15 90954284 90954479 -12540495 - B3 SINE B2 -2 214 1 7 1278 218 347 13 13 chr15 90954505 90954581 -12540393 + ID4_ SINE ID 6 81 -2 7 1278 1037 230 14 0 chr15 90955871 90956084 -12538890 - B3 SINE B2 0 216 1 7 1278 1362 161 0 4 chr15 90956116 90956341 -12538633 + URR1B DNA MER1_type 2 225 0 7 1278 286 258 67 39 chr15 90956402 90956518 -12538456 - PB1D10 SINE Alu -8 119 1 7 1278 556 276 30 0 chr15 90956805 90956939 -12538035 + B1F SINE Alu 12 149 0 7 1278 300 278 113 0 chr15 90956996 90957093 -12537881 - PB1D10 SINE Alu -9 108 1 7 1278 1529 238 10 102 chr15 90957219 90957459 -12537515 - ORR1D1 LTR MaLR 0 374 163 7 1278 621 66 0 0 chr15 90957459 90957550 -12537424 + (CAGAGA)n Simple_repeat Simple_repeat 6 96 0 7 1278 1529 238 10 102 chr15 90957550 90957721 -12537253 - ORR1D1 LTR MaLR -212 162 1 7 1278 2114 241 56 52 chr15 90957722 90958386 -12536588 - L1_Mur3 LINE L1 -1881 3999 3328 7 1278 1253 95 38 22 chr15 90958386 90958569 -12536405 - B2_Mm2 SINE B2 -9 186 1 7 1278 2114 241 56 52 chr15 90958569 90958744 -12536230 - L1_Mur3 LINE L1 -2553 3327 3157 7 1278 3631 259 71 45 chr15 90960396 90961612 -12533362 - L1_Mur3 LINE L1 -2708 3172 1935 7 1278 3566 103 21 0 chr15 90961612 90962124 -12532850 - Lx2 LINE L1 0 6997 6475 7 1278 3631 259 71 45 chr15 90962124 90962606 -12532368 - L1_Mur3 LINE L1 -3946 1934 1429 7 1278 207 0 0 0 chr15 90962606 90962629 -12532345 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 7 1278 3631 259 71 45 chr15 90962629 90962672 -12532302 - L1_Mur3 LINE L1 -4452 1428 1386 7 1278 330 26 0 0 chr15 90962810 90962849 -12532125 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1278 429 20 0 0 chr15 90963525 90963575 -12531399 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1278 225 0 0 0 chr15 90963575 90963599 -12531375 + (GA)n Simple_repeat Simple_repeat 1 25 0 7 1278 23 25 0 24 chr15 90963688 90963701 -12531273 + AT_rich Low_complexity Low_complexity 1 13 0 7 1278 1203 40 0 33 chr15 90963701 90963854 -12531120 - B1_Mus1 SINE Alu 0 148 1 7 1278 23 25 0 24 chr15 90963854 90963881 -12531093 + AT_rich Low_complexity Low_complexity 1 27 0 7 1279 1322 37 0 0 chr15 90964012 90964174 -12530800 + L1Md_F2 LINE L1 5425 5586 -297 7 1279 8418 37 0 1 chr15 90964175 90965168 -12529806 + L1Md_F2 LINE L1 5588 6579 -3 7 1279 459 247 36 3 chr15 90965324 90965467 -12529507 + RMER1B Other Other 768 889 -177 7 1279 519 235 49 21 chr15 90965528 90965673 -12529301 + MTE2b LTR MaLR 216 377 -2 7 1279 606 63 0 0 chr15 90965827 90965906 -12529068 + (CTCA)n Simple_repeat Simple_repeat 3 81 0 7 1279 197 59 59 0 chr15 90966358 90966392 -12528582 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 7 1279 516 266 26 0 chr15 90966863 90966976 -12527998 + PB1D10 SINE Alu 1 116 -1 7 1279 2199 156 31 8 chr15 90967591 90968092 -12526882 + RLTR20D LTR ERVK 1 568 0 7 1279 279 154 0 19 chr15 90969139 90969192 -12525782 - U6 snRNA snRNA -52 55 4 7 1279 674 242 62 88 chr15 90969932 90970272 -12524702 + Lx8 LINE L1 7143 7473 0 7 1279 240 284 9 38 chr15 90970864 90970970 -12524004 + L1MB2 LINE L1 5460 5562 -618 7 1279 253 306 112 0 chr15 90971081 90971215 -12523759 + L1MB2 LINE L1 5827 5975 -196 7 1279 466 301 8 0 chr15 90971216 90971339 -12523635 + MTD LTR MaLR 1 124 -295 7 1279 919 261 201 0 chr15 90971725 90972009 -12522965 + MTD LTR MaLR 79 419 0 7 1279 275 258 11 0 chr15 90972045 90972134 -12522840 + L1MB2 LINE L1 6012 6101 -70 7 1279 297 0 0 0 chr15 90972134 90972167 -12522807 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1279 2146 139 70 6 chr15 90972751 90973106 -12521868 - ORR1C1 LTR MaLR 0 378 1 7 1279 400 246 66 33 chr15 90973201 90973323 -12521651 - B1F1 SINE Alu -1 148 23 7 1279 657 0 0 0 chr15 90973377 90973450 -12521524 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 7 1279 184 250 38 89 chr15 90973791 90973870 -12521104 + L2c LINE L2 3301 3375 -12 7 1279 775 252 19 28 chr15 90973874 90974090 -12520884 - B3 SINE B2 0 216 3 7 1279 180 0 0 0 chr15 90974597 90974617 -12520357 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 7 1279 239 281 31 15 chr15 90974617 90974682 -12520292 - B1F1 SINE Alu -11 138 73 7 1279 1461 172 77 83 chr15 90974648 90974922 -12520052 + RMER17C LTR ERVK 16 410 -548 7 1279 375 41 0 0 chr15 90974922 90974971 -12520003 + (TC)n Simple_repeat Simple_repeat 2 50 0 7 1279 1461 163 101 75 chr15 90974971 90975155 -12519819 + RMER17C LTR ERVK 232 409 -1 7 1279 301 276 67 0 chr15 90975156 90975238 -12519736 - PB1D7 SINE Alu -32 88 3 7 1279 1237 218 82 39 chr15 90975378 90975708 -12519266 - ORR1D1 LTR MaLR 0 374 31 7 1279 811 221 23 0 chr15 90977931 90978103 -12516871 - B3 SINE B2 -10 206 31 7 1279 1177 68 0 7 chr15 90978207 90978356 -12516618 - B1_Mus1 SINE Alu 0 148 1 7 1279 2747 212 128 37 chr15 90980479 90981282 -12513692 + Lx7 LINE L1 5885 6760 -936 7 1279 279 0 0 0 chr15 90981378 90981409 -12513565 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 7 1279 218 154 0 25 chr15 90981445 90981485 -12513489 + RSINE1 SINE B4 3 41 -124 7 1279 24 0 0 0 chr15 90981633 90981657 -12513317 + AT_rich Low_complexity Low_complexity 1 24 0 7 1279 192 77 0 0 chr15 90982215 90982241 -12512733 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7 1279 440 170 18 45 chr15 90982421 90982532 -12512442 - Lx9 LINE L1 0 7644 7537 7 1279 31 0 0 0 chr15 90982663 90982694 -12512280 + AT_rich Low_complexity Low_complexity 1 31 0 7 1279 992 114 16 47 chr15 90982694 90982887 -12512087 - Lx2 LINE L1 0 6997 6811 7 1279 474 18 0 0 chr15 90983247 90983302 -12511672 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1279 8333 76 14 22 chr15 90984424 90986549 -12508425 + L1VL2 LINE L1 116 2219 -1396 7 1279 520 303 12 50 chr15 90986695 90986855 -12508119 + RSINE1 SINE B4 12 165 0 7 1279 601 136 36 0 chr15 90986881 90987021 -12507953 + (TAGA)n Simple_repeat Simple_repeat 2 146 0 7 1279 2189 175 34 0 chr15 90987435 90987876 -12507098 - Lx2B LINE L1 -700 6300 5845 7 1279 2549 196 143 8 chr15 90987876 90988493 -12506481 + Lx2B LINE L1 6296 6995 -5 7 1279 314 261 21 54 chr15 90989094 90989187 -12505787 - RSINE1 SINE B4 0 165 76 7 1279 832 170 163 10 chr15 90989195 90989391 -12505583 + URR1A DNA MER1_type 1 226 0 7 1279 224 171 24 0 chr15 90989391 90989429 -12505545 - RSINE1 SINE B4 -123 42 4 7 1279 205 182 23 0 chr15 90989624 90989668 -12505306 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 7 1279 365 261 36 0 chr15 90991007 90991118 -12503856 + PB1D10 SINE Alu 3 117 0 7 1279 582 273 12 25 chr15 90991372 90991568 -12503406 + B3A SINE B2 2 190 -5 7 1279 224 296 65 43 chr15 90992454 90992546 -12502428 - MIRb SINE MIR -21 247 154 7 1279 204 122 0 0 chr15 90992933 90992974 -12502000 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 1279 263 279 67 3 chr15 90993311 90993421 -12501553 - B1F2 SINE Alu -190 124 6 7 1279 1785 170 146 89 chr15 90993874 90994346 -12500628 + MT2A LTR ERVL 1 499 -34 7 1279 727 95 41 17 chr15 90994435 90994607 -12500367 + (TCTA)n Simple_repeat Simple_repeat 2 177 0 8 1279 301 333 156 39 chr15 90994759 90995015 -12499959 + L1MC LINE L1 5420 5705 -2177 8 1279 444 289 95 62 chr15 90995579 90995789 -12499185 - MER20 DNA MER1_type 0 219 3 8 1279 689 182 0 7 chr15 90995960 90996104 -12498870 + CT-rich Low_complexity Low_complexity 2 144 0 8 1279 747 198 0 0 chr15 90996123 90996249 -12498725 - B1_Mur1 SINE Alu -6 143 18 8 1279 222 156 0 0 chr15 90996848 90996880 -12498094 + B3 SINE B2 16 47 -169 8 1279 1414 52 10 35 chr15 90996878 90997044 -12497930 - B2_Mm2 SINE B2 0 195 34 8 1279 2688 62 3 14 chr15 90997044 90997401 -12497573 - L1Md_F2 LINE L1 -1 6581 6229 8 1279 1414 52 10 35 chr15 90997401 90997434 -12497540 - B2_Mm2 SINE B2 -162 33 1 8 1279 700 307 28 6 chr15 90997434 90997611 -12497363 + B3 SINE B2 30 210 -6 8 1279 456 274 107 34 chr15 90998039 90998273 -12496701 - L1MB5 LINE L1 -201 5973 5723 8 1279 279 188 0 0 chr15 90998324 90998372 -12496602 - L1MB5 LINE L1 -578 5600 5553 8 1279 2607 108 53 21 chr15 90999120 90999538 -12495436 + Lx LINE L1 6220 6650 -4 8 1279 309 82 0 0 chr15 90999672 90999721 -12495253 + (CACAA)n Simple_repeat Simple_repeat 4 52 0 8 1279 1084 95 0 0 chr15 91000066 91000213 -12494761 - B1_Mm SINE Alu 0 147 1 1 1279 185 128 21 0 chr15 91000305 91000352 -12494622 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 1279 33 43 0 0 chr15 91000367 91000414 -12494560 + AT_rich Low_complexity Low_complexity 1 47 0 3 1279 22 0 0 0 chr15 91000433 91000455 -12494519 + AT_rich Low_complexity Low_complexity 1 22 0 4 1279 228 200 41 41 chr15 91001613 91001686 -12493288 + tRNA-Ala-GCY_ tRNA tRNA 2 74 -1 5 1279 26 82 0 0 chr15 91005479 91005540 -12489434 + AT_rich Low_complexity Low_complexity 1 61 0 6 1279 430 313 43 0 chr15 91005779 91005894 -12489080 + MER2 DNA MER2_type 2 121 -224 7 1279 249 277 48 12 chr15 91007187 91007271 -12487703 - BC1_Mm scRNA scRNA -59 93 7 8 1279 371 315 149 93 chr15 91007614 91007957 -12487017 + ORR1E LTR MaLR 8 369 -1 9 1279 591 15 0 0 chr15 91007974 91008042 -12486932 + (CTA)n Simple_repeat Simple_repeat 1 68 0 1 1279 185 65 0 31 chr15 91009452 91009484 -12485490 + (CAAAA)n Simple_repeat Simple_repeat 4 34 0 1 1279 471 222 28 40 chr15 91009995 91010131 -12484843 - PB1D9 SINE Alu -1 149 6 1 1279 216 259 34 17 chr15 91010164 91010223 -12484751 + ID SINE ID 3 62 -162 1 1279 1742 193 54 44 chr15 91011180 91011587 -12483387 - MTD LTR MaLR -8 411 1 1 1279 196 28 26 53 chr15 91012004 91012042 -12482932 + (TAA)n Simple_repeat Simple_repeat 1 37 0 1 1279 263 302 40 65 chr15 91012401 91012525 -12482449 - L2c LINE L2 -4 3383 3263 1 1279 31 0 0 0 chr15 91013357 91013388 -12481586 + AT_rich Low_complexity Low_complexity 1 31 0 1 1279 291 335 135 45 chr15 91013589 91013767 -12481207 + B4A SINE B4 1 194 -98 1 1279 495 261 160 42 chr15 91013801 91013945 -12481029 + RSINE1 SINE B4 5 165 0 1 1279 27 49 0 0 chr15 91013983 91014024 -12480950 + AT_rich Low_complexity Low_complexity 1 41 0 2 1279 286 303 0 15 chr15 91014030 91014097 -12480877 + B4A SINE B4 218 283 -9 1 1279 189 269 87 29 chr15 91014256 91014325 -12480649 + L2 LINE L2 315 387 -3032 2 1279 243 311 89 0 chr15 91014337 91014427 -12480547 - PB1D7 SINE Alu -21 99 2 2 1279 1117 166 71 0 chr15 91015425 91015636 -12479338 - URR1A DNA MER1_type 0 226 1 2 1279 197 295 230 9 chr15 91015730 91015843 -12479131 - MIRb SINE MIR -39 229 92 2 1279 217 280 108 3 chr15 91015926 91016029 -12478945 - MIRb SINE MIR -27 235 117 2 1279 516 16 0 0 chr15 91016203 91016264 -12478710 + (TATG)n Simple_repeat Simple_repeat 4 64 0 2 1279 435 318 76 25 chr15 91016279 91016437 -12478537 - B3A SINE B2 -30 168 3 2 1279 659 196 52 15 chr15 91016578 91016713 -12478261 - B1_Mm SINE Alu -6 141 2 2 1279 215 225 0 0 chr15 91017420 91017460 -12477514 + T-rich Low_complexity Low_complexity 5 44 0 2 1279 267 189 0 0 chr15 91019767 91019820 -12475154 + GA-rich Low_complexity Low_complexity 2 54 0 3 1279 33 43 0 0 chr15 91019831 91019878 -12475096 + AT_rich Low_complexity Low_complexity 1 47 0 3 1279 21 0 0 0 chr15 91020055 91020076 -12474898 + AT_rich Low_complexity Low_complexity 1 21 0 3 1279 23 0 0 0 chr15 91020220 91020243 -12474731 + AT_rich Low_complexity Low_complexity 1 23 0 3 1279 215 0 67 0 chr15 91023008 91023038 -12471936 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 3 1279 251 329 56 39 chr15 91023648 91023774 -12471200 + MIRb SINE MIR 99 233 -29 3 1279 746 257 9 26 chr15 91024058 91024286 -12470688 + Lx9 LINE L1 7066 7289 -355 3 1279 6037 92 75 1 chr15 91024289 91025225 -12469749 - Lx LINE L1 -3 6651 5647 3 1279 1007 198 71 28 chr15 91025254 91025577 -12469397 + Lx9 LINE L1 7308 7644 0 3 1279 1924 156 89 9 chr15 91026038 91026375 -12468599 + ORR1C1 LTR MaLR 15 378 0 3 1279 837 227 46 10 chr15 91027473 91027669 -12467305 + B3 SINE B2 3 205 -11 3 1279 2200 69 3 0 chr15 91027669 91027960 -12467014 + Lx3_Mus LINE L1 6718 7009 0 4 1279 22 56 0 0 chr15 91028078 91028114 -12466860 + AT_rich Low_complexity Low_complexity 1 36 0 4 1279 1273 111 26 0 chr15 91028523 91028713 -12466261 - B2_Mm2 SINE B2 0 195 1 4 1279 195 162 0 0 chr15 91028881 91028918 -12466056 + A-rich Low_complexity Low_complexity 1 37 0 4 1279 539 170 18 40 chr15 91029309 91029433 -12465541 - PB1D9 SINE Alu 0 120 1 4 1279 180 0 0 0 chr15 91029512 91029532 -12465442 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1279 579 122 0 0 chr15 91030328 91030418 -12464556 + (TA)n Simple_repeat Simple_repeat 1 90 0 4 1279 336 312 118 16 chr15 91030439 91030566 -12464408 - B1F1 SINE Alu -9 140 1 4 1279 233 135 0 55 chr15 91030792 91030847 -12464127 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1279 225 282 55 27 chr15 91030988 91031061 -12463913 + B1F SINE Alu 5 79 -70 4 1279 2227 157 164 58 chr15 91031206 91031726 -12463248 - RMER15 LTR ERVL 0 575 1 5 1279 362 267 99 0 chr15 91031934 91032035 -12462939 + B3A SINE B2 98 208 -8 5 1279 488 322 27 7 chr15 91032375 91032525 -12462449 + RSINE1 SINE B4 1 153 -12 5 1279 396 82 0 0 chr15 91032532 91032593 -12462381 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1279 543 107 0 0 chr15 91036414 91036498 -12458476 + (TA)n Simple_repeat Simple_repeat 2 85 0 5 1279 186 43 0 0 chr15 91036505 91036528 -12458446 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1279 442 261 80 28 chr15 91036570 91036783 -12458191 + Lx9 LINE L1 5796 6019 -1625 5 1279 331 241 280 6 chr15 91036832 91037007 -12457967 + Lx9 LINE L1 6168 6390 -1254 5 1279 873 262 27 4 chr15 91036996 91037252 -12457722 + Lx9 LINE L1 6267 6672 -972 5 1279 355 169 13 0 chr15 91039854 91039931 -12455043 + Lx4A LINE L1 6978 7055 -3 5 1279 216 97 0 0 chr15 91039931 91039962 -12455012 + (TAAG)n Simple_repeat Simple_repeat 1 31 0 5 1279 387 293 83 0 chr15 91040363 91040520 -12454454 - ORR1D1 LTR MaLR 0 374 205 6 1279 226 252 76 93 chr15 91040575 91040693 -12454281 + LTR86A1 LTR ERVL 43 158 -355 6 1279 210 118 0 0 chr15 91041022 91041056 -12453918 + (TCC)n Simple_repeat Simple_repeat 3 36 0 6 1279 254 340 28 0 chr15 91041743 91041849 -12453125 - HUERS-P3b-int LTR ERV1 -5532 1886 1778 6 1279 32 75 0 0 chr15 91042560 91042627 -12452347 + AT_rich Low_complexity Low_complexity 1 67 0 6 1279 225 227 11 64 chr15 91042697 91042791 -12452183 + A-rich Low_complexity Low_complexity 2 90 0 6 1279 281 299 45 27 chr15 91042797 91042907 -12452067 - Lx7 LINE L1 -377 7319 7208 6 1279 207 114 0 0 chr15 91042962 91042997 -12451977 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 6 1279 379 242 20 20 chr15 91043002 91043154 -12451820 - Lx7 LINE L1 -149 7547 7396 6 1279 779 230 65 31 chr15 91043159 91043451 -12451523 + L1_Mur3 LINE L1 54 355 -7357 6 1279 1894 76 54 17 chr15 91043855 91044149 -12450825 - L1_Mus3 LINE L1 0 6638 6334 7 1279 1220 69 0 0 chr15 91044149 91044309 -12450665 + L1_Mus3 LINE L1 6169 6328 -310 7 1279 4906 38 59 0 chr15 91045388 91045995 -12448979 - L1Md_F2 LINE L1 0 6582 5940 7 1279 465 288 68 0 chr15 91046354 91046486 -12448488 - RSINE1 SINE B4 -17 148 8 7 1279 324 289 58 11 chr15 91046569 91046670 -12448304 - B1F SINE Alu -6 114 1 7 1279 308 269 37 28 chr15 91046776 91046883 -12448091 + BLACKJACK DNA AcHobo 205 312 -2632 7 1279 1189 130 10 0 chr15 91047198 91047390 -12447584 - Lx LINE L1 -6 6648 6455 7 1279 393 258 129 36 chr15 91047591 91047900 -12447074 - L1MA5 LINE L1 -371 5929 5592 7 1279 716 269 0 12 chr15 91047936 91048098 -12446876 - RSINE1 SINE B4 -4 161 2 7 1279 647 275 45 0 chr15 91048186 91048430 -12446544 - L1MA5 LINE L1 -722 5581 5327 7 1279 420 328 39 29 chr15 91048672 91048879 -12446095 + RMER15 LTR ERVL 325 533 -42 7 1279 414 264 115 6 chr15 91048931 91049277 -12445697 + L1M2 LINE L1 2747 3137 -3009 7 1279 722 260 89 30 chr15 91049341 91049710 -12445264 - L1_Mur3 LINE L1 -3238 2642 2252 8 1279 1130 62 0 14 chr15 91049741 91049888 -12445086 - B1_Mus1 SINE Alu -2 146 2 8 1279 6214 226 65 21 chr15 91050721 91052918 -12442056 - Lx9 LINE L1 -8 7636 5296 8 1279 538 307 13 10 chr15 91052920 91053111 -12441863 - MT2A LTR ERVL -88 513 318 8 1279 10056 63 29 9 chr15 91053177 91054115 -12440859 - Lx3_Mus LINE L1 0 7009 6062 8 1279 599 25 0 37 chr15 91054115 91054197 -12440777 + (TCCC)n Simple_repeat Simple_repeat 2 80 0 8 1279 10056 56 11 15 chr15 91054197 91054700 -12440274 - Lx3_Mus LINE L1 -948 6061 5543 8 1279 307 189 0 0 chr15 91054700 91054753 -12440221 - MT2A LTR ERVL -386 147 95 8 1279 666 208 33 46 chr15 91054738 91054889 -12440085 - MT2A LTR ERVL -384 149 1 8 1279 273 161 18 0 chr15 91054889 91054945 -12440029 - MERVL_2A-int LTR ERVL 0 5761 5705 8 1279 227 292 40 40 chr15 91054948 91055048 -12439926 - ORR1A3-int LTR MaLR -1329 634 535 8 1279 8440 168 76 8 chr15 91055051 91056045 -12438929 - MERVL_2A-int LTR ERVL -111 5650 4575 8 1279 2441 146 11 6 chr15 91056045 91056410 -12438564 - ORR1B2 LTR MaLR 0 367 1 8 1279 21196 180 33 16 chr15 91056410 91059265 -12435709 - MERVL_2A-int LTR ERVL -1187 4574 1682 8 1279 2277 41 0 154 chr15 91059265 91059610 -12435364 - RLTR10B LTR ERVK 0 292 1 8 1279 21196 180 33 16 chr15 91059610 91059881 -12435093 - MERVL_2A-int LTR ERVL -4080 1681 1410 8 1279 2293 184 44 24 chr15 91059876 91060333 -12434641 - MERVL_2A-int LTR ERVL -4723 1038 573 8 1279 469 304 118 24 chr15 91060334 91060580 -12434394 + MLT1A0 LTR MaLR 43 311 -54 8 1279 410 232 142 55 chr15 91061060 91061247 -12433727 - LTR48 LTR ERV1 -466 178 1 9 1279 297 287 11 11 chr15 91061303 91061391 -12433583 - BC1_Mm scRNA scRNA -53 99 12 9 1279 426 339 31 0 chr15 91061405 91061532 -12433442 - B1F1 SINE Alu -16 133 3 9 1279 439 264 90 37 chr15 91062147 91062281 -12432693 + B1F1 SINE Alu 2 142 -7 9 1279 1579 198 113 20 chr15 91062547 91062945 -12432029 + Lx9 LINE L1 7142 7576 -68 9 1279 653 0 13 0 chr15 91063395 91063472 -12431502 + (GA)n Simple_repeat Simple_repeat 1 78 0 9 1279 580 264 114 25 chr15 91064220 91064463 -12430511 + L1MA4 LINE L1 5697 5954 -202 9 1279 315 0 0 0 chr15 91064478 91064513 -12430461 + (TA)n Simple_repeat Simple_repeat 2 36 0 9 1279 243 0 0 0 chr15 91064513 91064540 -12430434 + (TG)n Simple_repeat Simple_repeat 1 27 0 9 1279 944 164 6 0 chr15 91064540 91064717 -12430257 + (TA)n Simple_repeat Simple_repeat 1 178 0 9 1279 605 250 57 62 chr15 91064966 91065158 -12429816 + B3A SINE B2 2 192 -6 1 1279 445 299 17 0 chr15 91065453 91065570 -12429404 - RSINE1 SINE B4 -4 161 43 1 1279 1248 7 0 7 chr15 91065807 91065944 -12429030 + B1_Mus2 SINE Alu 1 136 -11 1 1279 693 41 49 0 chr15 91065946 91066068 -12428906 + (CAAAC)n Simple_repeat Simple_repeat 2 129 0 1 1279 23 0 0 0 chr15 91066446 91066469 -12428505 + AT_rich Low_complexity Low_complexity 1 23 0 1 1279 1182 69 7 7 chr15 91066629 91066775 -12428199 + B1_Mus1 SINE Alu 3 148 0 1 1279 488 275 143 0 chr15 91067053 91067242 -12427732 + B3 SINE B2 1 216 0 1 1279 293 266 84 11 chr15 91067468 91067563 -12427411 - MER34 LTR ERV1 -69 473 372 1 1279 1840 85 40 8 chr15 91068538 91068786 -12426188 + L1Md_F2 LINE L1 6315 6570 -12 1 1279 986 181 14 73 chr15 91068813 91069033 -12425941 - URR1B DNA MER1_type -2 223 17 1 1279 183 42 0 0 chr15 91070158 91070182 -12424792 + (TCTA)n Simple_repeat Simple_repeat 3 26 0 1 1279 798 289 77 59 chr15 91070229 91070516 -12424458 - B4A SINE B4 0 292 1 1 1279 357 24 0 0 chr15 91071685 91071727 -12423247 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 1 1279 21 71 0 0 chr15 91071976 91072018 -12422956 + AT_rich Low_complexity Low_complexity 1 42 0 1 1279 27 0 0 0 chr15 91072071 91072098 -12422876 + AT_rich Low_complexity Low_complexity 1 27 0 1 1279 295 167 16 16 chr15 91072468 91072529 -12422445 - Lx7 LINE L1 -375 7321 7261 1 1279 1061 292 118 35 chr15 91073415 91073523 -12421451 - L1MA5 LINE L1 -365 5935 5820 1 1279 180 77 0 0 chr15 91073523 91073549 -12421425 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1279 1061 292 118 35 chr15 91073549 91073834 -12421140 - L1MA5 LINE L1 -481 5819 5495 1 1279 225 0 0 0 chr15 91073834 91073859 -12421115 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1 1279 1061 292 118 35 chr15 91073859 91074032 -12420942 - L1MA5 LINE L1 -806 5494 5323 1 1279 1042 242 19 0 chr15 91074039 91074250 -12420724 - B3 SINE B2 0 216 2 1 1279 235 304 13 0 chr15 91074420 91074499 -12420475 - L1MA5 LINE L1 -1140 5003 4924 1 1279 617 260 55 22 chr15 91075047 91075228 -12419746 + B3A SINE B2 4 190 -8 1 1279 369 274 69 0 chr15 91076796 91076898 -12418076 + RSINE1 SINE B4 48 156 -9 1 1279 836 252 53 30 chr15 91078437 91078703 -12416271 + B4 SINE B4 2 273 -19 1 1279 293 0 27 0 chr15 91078707 91078744 -12416230 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1279 974 182 69 5 chr15 91079317 91079521 -12415453 + MTC LTR MaLR 1 217 -204 1 1279 439 161 24 12 chr15 91079496 91079578 -12415396 + MTC LTR MaLR 331 413 -8 1 1279 319 336 13 77 chr15 91080258 91080413 -12414561 + MTD LTR MaLR 1 145 -274 1 1279 393 339 53 38 chr15 91080412 91080544 -12414430 - RSINE1 SINE B4 -16 149 16 1 1279 258 312 49 12 chr15 91080975 91081056 -12413918 + MLT1J2 LTR MaLR 257 340 -108 1 1279 1182 227 101 15 chr15 91082151 91082477 -12412497 + ORR1D1 LTR MaLR 21 374 0 1 1279 186 43 0 0 chr15 91082950 91082973 -12412001 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1279 192 40 0 0 chr15 91083608 91083633 -12411341 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1279 311 252 47 18 chr15 91083851 91083975 -12410999 - L1MEg LINE L1 -4637 2465 2273 1 1279 482 196 9 0 chr15 91084461 91084573 -12410401 + CT-rich Low_complexity Low_complexity 2 114 0 1 1279 918 189 19 56 chr15 91086174 91086378 -12408596 - ORR1D1 LTR MaLR -92 282 87 1 1279 1649 157 125 23 chr15 91086378 91086723 -12408251 - ORR1C2 LTR MaLR 0 384 5 1 1279 28 0 0 0 chr15 91087041 91087069 -12407905 + AT_rich Low_complexity Low_complexity 1 28 0 1 1279 242 233 23 23 chr15 91088137 91088225 -12406749 + (TA)n Simple_repeat Simple_repeat 2 89 0 1 1279 1326 248 68 38 chr15 91088513 91088911 -12406063 - MTD LTR MaLR -7 412 3 1 1279 242 255 99 40 chr15 91089570 91089721 -12405253 - L1_Rod LINE L1 -754 5093 4934 1 1279 216 367 0 0 chr15 91090156 91090235 -12404739 - ID4_ SINE ID 0 83 5 1 1279 235 327 74 66 chr15 91090571 91090692 -12404282 - LTR78 LTR ERV1 -307 997 876 1 1279 2648 50 92 0 chr15 91091502 91091860 -12403114 - MTB_Mm LTR MaLR -16 391 1 1 1279 222 171 0 0 chr15 91091883 91091924 -12403050 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1279 4052 207 50 44 chr15 91092103 91093618 -12401356 + L1_Mur3 LINE L1 324 1828 -4052 1 1279 6402 101 31 25 chr15 91093618 91094549 -12400425 - Lx3C LINE L1 -7 6969 6033 1 1279 3743 191 50 67 chr15 91094549 91094937 -12400037 + L1_Mur3 LINE L1 1829 2222 -3658 1 159 300 191 29 144 chr15 91094940 91095044 -12399930 - RMER1B Other Other -973 93 2 1 1280 21 36 0 0 chr15 91095554 91095582 -12399392 + AT_rich Low_complexity Low_complexity 1 28 0 1 1280 1551 269 136 47 chr15 91095598 91096145 -12398829 + L1MCa LINE L1 806 1375 -5133 1 1280 423 0 0 0 chr15 91096145 91096192 -12398782 + (CAAAA)n Simple_repeat Simple_repeat 5 51 0 1 1280 1551 269 136 47 chr15 91096192 91096632 -12398342 + L1MCa LINE L1 1376 1881 -4627 1 1280 608 224 193 11 chr15 91096639 91096815 -12398159 + B3 SINE B2 4 211 -5 1 1280 989 301 27 36 chr15 91096856 91097389 -12397585 - Lx6 LINE L1 -1616 6028 5472 1 1280 491 277 21 0 chr15 91097442 91097583 -12397391 - RMER1C Other Other -599 743 600 1 1280 879 192 62 0 chr15 91097590 91097783 -12397191 + RLTR11A2 LTR ERVK 323 527 0 1 1280 1022 174 63 53 chr15 91097808 91098015 -12396959 + B3 SINE B2 5 213 -3 1 1280 322 71 33 56 chr15 91102940 91103030 -12391944 + A-rich Low_complexity Low_complexity 3 90 0 1 1280 708 98 0 0 chr15 91103775 91103877 -12391097 + (TTCC)n Simple_repeat Simple_repeat 4 105 0 1 1280 745 93 9 0 chr15 91103900 91104007 -12390967 - B1_Mm SINE Alu 0 147 40 1 1280 236 53 26 0 chr15 91104199 91104237 -12390737 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1280 280 180 39 136 chr15 91104963 91105066 -12389908 + URR1B DNA MER1_type 70 162 -63 1 1280 2345 37 4 4 chr15 91105503 91105773 -12389201 + L1Md_F2 LINE L1 6310 6579 -3 1 1280 550 128 15 15 chr15 91107205 91107340 -12387634 + (CAGA)n Simple_repeat Simple_repeat 2 136 0 1 1280 722 193 16 60 chr15 91107359 91107541 -12387433 - ORR1D1 LTR MaLR -204 180 7 1 1280 3307 237 92 26 chr15 91107543 91108424 -12386550 - ORR1D1-int LTR MaLR -39 1331 393 1 1280 2772 165 23 31 chr15 91108486 91108998 -12385976 + RMER1B Other Other 554 1061 -5 1 1280 1622 254 5 23 chr15 91109004 91109402 -12385572 - ORR1D1-int LTR MaLR -1118 391 1 1 1280 949 232 221 47 chr15 91109402 91109728 -12385246 - ORR1D1 LTR MaLR 0 384 2 1 1280 2976 271 70 14 chr15 91109729 91109874 -12385100 - Lx7 LINE L1 -323 7373 7227 1 1280 4074 107 51 26 chr15 91109874 91110460 -12384514 - MT2B LTR ERVL 0 601 1 1 1280 2976 271 70 14 chr15 91110460 91111198 -12383776 - Lx7 LINE L1 -470 7226 6442 1 1280 3291 233 35 57 chr15 91111200 91111604 -12383370 - Lx7 LINE L1 -1562 6134 5748 1 1280 3023 44 9 0 chr15 91111604 91111946 -12383028 + ORR1A1 LTR MaLR 2 346 0 1 1280 3262 224 49 33 chr15 91111946 91112611 -12382363 - Lx7 LINE L1 -133 5747 5054 1 1280 657 199 0 0 chr15 91112616 91112752 -12382222 + (TCTA)n Simple_repeat Simple_repeat 1 136 0 1 1280 396 208 99 0 chr15 91112771 91112872 -12382102 - Lx7 LINE L1 -847 5033 4923 1 1280 4857 148 18 63 chr15 91112873 91113103 -12381871 + RMER19B LTR ERVK 2 230 -672 1 1280 441 0 0 0 chr15 91113103 91113152 -12381822 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1280 4857 148 18 63 chr15 91113152 91113833 -12381141 + RMER19B LTR ERVK 231 876 -26 1 1280 4194 146 25 8 chr15 91113833 91114271 -12380703 + Lx4B LINE L1 6319 6767 -291 1 1280 189 0 0 0 chr15 91114271 91114292 -12380682 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 1280 4194 146 25 8 chr15 91114292 91114573 -12380401 + Lx4B LINE L1 6768 7050 -8 1 1280 4857 148 18 63 chr15 91114573 91114600 -12380374 + RMER19B LTR ERVK 877 899 -3 1 1280 213 94 0 0 chr15 91114859 91114891 -12380083 + (TGGGGG)n Simple_repeat Simple_repeat 3 34 0 1 1280 819 143 25 6 chr15 91116202 91116364 -12378610 + L1_Mus4 LINE L1 6470 6634 -2 1 1280 189 94 0 0 chr15 91116613 91116645 -12378329 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 1 1280 27 49 0 0 chr15 91116730 91116771 -12378203 + AT_rich Low_complexity Low_complexity 1 41 0 1 1280 4562 40 29 0 chr15 91117190 91117734 -12377240 + LTRIS2 LTR ERV1 5 564 0 1 1280 396 0 0 0 chr15 91119044 91119088 -12375886 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1 1280 558 289 29 19 chr15 91120232 91120440 -12374534 + RMER15 LTR ERVL 351 560 -15 1 1280 378 0 0 0 chr15 91121386 91121428 -12373546 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1280 330 152 0 0 chr15 91122603 91122662 -12372312 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 1280 1362 57 0 0 chr15 91122733 91122962 -12372012 + (CA)n Simple_repeat Simple_repeat 1 229 0 1 1280 1163 201 232 19 chr15 91123886 91124196 -12370778 + MTEb LTR MaLR 1 376 -3 1 1280 6033 241 47 81 chr15 91125205 91126977 -12367997 + Lx7 LINE L1 5581 7317 -379 1 1280 354 23 0 0 chr15 91126977 91127020 -12367954 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1280 6033 239 46 83 chr15 91127020 91127133 -12367841 + Lx7 LINE L1 7318 7408 -288 1 1280 231 264 0 165 chr15 91127153 91127280 -12367694 + Lx7 LINE L1 7563 7668 -28 1 1280 1566 70 30 9 chr15 91127722 91127952 -12367022 + L1_Mus3 LINE L1 6404 6638 0 1 1280 382 133 0 0 chr15 91128924 91128984 -12365990 - Lx3C LINE L1 -357 6619 6560 1 1280 1064 202 121 27 chr15 91128982 91129312 -12365662 + Lx3C LINE L1 6614 6974 -2 1 1280 204 97 0 0 chr15 91130987 91131018 -12363956 + (TAA)n Simple_repeat Simple_repeat 2 32 0 1 1280 707 113 17 0 chr15 91131050 91131165 -12363809 + (GAAA)n Simple_repeat Simple_repeat 1 117 0 1 1280 883 239 49 0 chr15 91131882 91132087 -12362887 - B3 SINE B2 -1 215 1 1 1280 1224 101 0 0 chr15 91132913 91133091 -12361883 + (TTC)n Simple_repeat Simple_repeat 1 178 0 1 1280 380 336 26 18 chr15 91135676 91135903 -12359071 + MT2A LTR ERVL 3 231 -302 1 1280 714 145 8 0 chr15 91135915 91136039 -12358935 + URR1B DNA MER1_type 100 224 -1 1 1280 432 246 54 14 chr15 91136146 91136294 -12358680 + MT2A LTR ERVL 279 432 -101 1 1280 25 51 0 0 chr15 91136523 91136562 -12358412 + AT_rich Low_complexity Low_complexity 1 39 0 1 1280 233 286 0 87 chr15 91136569 91136661 -12358313 - RSINE1 SINE B4 0 165 82 1 1280 519 239 26 0 chr15 91137535 91137652 -12357322 + PB1D9 SINE Alu 1 120 0 1 1280 444 225 18 0 chr15 91138154 91138265 -12356709 - ID_B1 SINE B4 -7 217 105 1 1280 338 266 69 23 chr15 91138265 91138285 -12356689 - B1F SINE Alu -7 142 6 1 1280 951 155 123 0 chr15 91138976 91139163 -12355811 + B3 SINE B2 2 211 -5 1 1280 398 284 42 32 chr15 91140600 91140816 -12354158 + ORR1E LTR MaLR 107 332 -38 1 1280 6263 85 17 7 chr15 91141925 91142770 -12352204 - Lx LINE L1 0 6654 5802 1 1280 2866 223 78 41 chr15 91142988 91143774 -12351200 + RLTR40 LTR ERVK 3 817 0 2 1280 3655 53 17 13 chr15 91143905 91144366 -12350608 + L1_Mus1 LINE L1 6105 6567 0 2 1280 33 0 0 0 chr15 91144634 91144667 -12350307 + AT_rich Low_complexity Low_complexity 1 33 0 2 1280 324 273 45 0 chr15 91144926 91145014 -12349960 - MLT1I LTR MaLR -219 192 101 2 1280 25 0 0 0 chr15 91145023 91145048 -12349926 + AT_rich Low_complexity Low_complexity 1 25 0 2 1280 219 258 0 16 chr15 91146994 91147067 -12347907 + T-rich Low_complexity Low_complexity 1 71 0 2 1280 1189 28 7 0 chr15 91147291 91147434 -12347540 + B1_Mm SINE Alu 1 144 -3 2 1280 248 154 19 0 chr15 91147964 91148016 -12346958 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1280 681 284 50 15 chr15 91148647 91148846 -12346128 - B3A SINE B2 -4 191 1 2 1280 230 339 0 0 chr15 91149758 91149817 -12345157 + B1F SINE Alu 3 61 -88 2 1280 759 204 9 80 chr15 91149920 91150133 -12344841 - B3A SINE B2 0 198 1 2 1280 334 307 17 50 chr15 91150389 91150509 -12344465 - PB1 SINE Alu -11 116 1 2 1280 218 333 39 0 chr15 91150539 91150617 -12344357 - B1F2 SINE Alu -47 102 22 2 1280 448 236 131 42 chr15 91150724 91150749 -12344225 - B3A SINE B2 -13 185 163 2 1280 408 20 0 0 chr15 91150749 91150798 -12344176 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1280 448 236 131 42 chr15 91150798 91150940 -12344034 - B3A SINE B2 -36 162 3 2 1280 1096 45 45 0 chr15 91152556 91152690 -12342284 + B1_Mm SINE Alu 1 140 -7 2 1280 21 0 0 0 chr15 91152750 91152771 -12342203 + AT_rich Low_complexity Low_complexity 1 21 0 2 1280 23 0 0 0 chr15 91154025 91154048 -12340926 + AT_rich Low_complexity Low_complexity 1 23 0 2 1280 1530 49 10 10 chr15 91154350 91154558 -12340416 + L1_Mus3 LINE L1 6424 6631 -7 2 1280 441 305 51 32 chr15 91155424 91155580 -12339394 - RSINE1 SINE B4 -4 161 3 2 1280 220 155 14 14 chr15 91155639 91155711 -12339263 + GA-rich Low_complexity Low_complexity 2 73 0 2 1280 34 24 0 0 chr15 91158602 91158643 -12336331 + AT_rich Low_complexity Low_complexity 1 41 0 2 1280 21 0 0 0 chr15 91159226 91159247 -12335727 + AT_rich Low_complexity Low_complexity 1 21 0 2 1280 402 79 0 0 chr15 91159271 91159334 -12335640 + (TC)n Simple_repeat Simple_repeat 2 64 0 2 1280 234 0 0 0 chr15 91159334 91159360 -12335614 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1280 303 327 19 0 chr15 91161147 91161251 -12333723 + PB1D10 SINE Alu 1 106 -11 2 1280 363 154 0 0 chr15 91161258 91161323 -12333651 + (CAA)n Simple_repeat Simple_repeat 1 65 0 2 1280 1571 191 58 71 chr15 91161891 91162006 -12332968 + ORR1C1 LTR MaLR 1 114 -264 2 1280 2240 99 48 0 chr15 91162006 91162318 -12332656 - ORR1A2 LTR MaLR 0 327 1 2 1280 1571 191 58 71 chr15 91162318 91162584 -12332390 + ORR1C1 LTR MaLR 115 377 -1 2 1280 6015 178 132 21 chr15 91162585 91163944 -12331030 + ORR1C1-int LTR MaLR 1 1509 0 2 1280 1263 139 302 47 chr15 91163944 91164245 -12330729 + ORR1C1 LTR MaLR 1 378 0 2 1280 348 272 38 19 chr15 91164603 91164708 -12330266 + PB1D10 SINE Alu 2 108 -9 2 1280 27 0 0 0 chr15 91164723 91164750 -12330224 + AT_rich Low_complexity Low_complexity 1 27 0 2 1280 293 247 24 47 chr15 91165189 91165274 -12329700 + PB1D10 SINE Alu 8 90 -27 2 1280 400 196 18 18 chr15 91165297 91165411 -12329563 + (CATA)n Simple_repeat Simple_repeat 1 114 0 2 1280 597 196 12 18 chr15 91165426 91165592 -12329382 + (CATA)n Simple_repeat Simple_repeat 4 168 0 2 1280 533 293 78 21 chr15 91166565 91166757 -12328217 + B3 SINE B2 1 203 -13 2 1280 549 0 0 0 chr15 91167606 91167667 -12327307 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 1280 389 227 242 19 chr15 91167994 91168205 -12326769 + Charlie4a DNA MER1_type 36 293 -215 2 1280 927 63 0 0 chr15 91168397 91168524 -12326450 + (GGGA)n Simple_repeat Simple_repeat 1 127 0 2 1280 270 250 54 0 chr15 91168524 91168580 -12326394 + ID4 SINE ID 14 72 -11 2 1280 301 259 47 0 chr15 91168596 91168681 -12326293 + Charlie4a DNA MER1_type 360 448 -60 2 1280 22 0 0 0 chr15 91168839 91168861 -12326113 + AT_rich Low_complexity Low_complexity 1 22 0 2 1280 1086 128 25 74 chr15 91168875 91169078 -12325896 + B2_Mm2 SINE B2 2 194 -1 2 1280 602 228 218 21 chr15 91169707 91169895 -12325079 + ORR1C2 LTR MaLR 160 384 0 2 1280 180 111 0 0 chr15 91169922 91169949 -12325025 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1280 1758 252 30 5 chr15 91170168 91170575 -12324399 + MTC LTR MaLR 5 421 0 2 1280 517 240 192 0 chr15 91170959 91171084 -12323890 - B1F2 SINE Alu 0 149 1 2 1280 300 333 0 61 chr15 91171226 91171325 -12323649 - PB1D10 SINE Alu -24 93 1 2 1280 1630 64 0 22 chr15 91172418 91172642 -12322332 - MTB LTR MaLR 0 400 182 2 1280 270 205 0 0 chr15 91172644 91172722 -12322252 + T-rich Low_complexity Low_complexity 1 78 0 2 1280 1161 90 7 0 chr15 91172729 91172874 -12322100 - B1_Mus2 SINE Alu 0 147 2 2 1280 1331 77 44 0 chr15 91172881 91173064 -12321910 - MTB LTR MaLR -209 191 1 2 1280 357 256 12 0 chr15 91174922 91175008 -12319966 + PB1D10 SINE Alu 24 110 -7 2 1280 221 220 80 0 chr15 91175015 91175065 -12319909 + ID4 SINE ID 4 57 -26 2 1280 531 138 0 0 chr15 91175108 91175195 -12319779 + (CA)n Simple_repeat Simple_repeat 1 87 0 2 1280 1801 181 86 3 chr15 91177026 91177374 -12317600 - RLTR14 LTR ERV1 0 382 6 2 1280 484 341 150 9 chr15 91178176 91178496 -12316478 + MT2A LTR ERVL 153 517 -16 2 1280 497 299 24 0 chr15 91178598 91178725 -12316249 - B1F SINE Alu -2 147 18 2 1280 351 0 0 0 chr15 91178764 91178803 -12316171 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1280 738 272 62 0 chr15 91178955 91179150 -12315824 + B4A SINE B4 10 216 -76 2 1280 211 351 14 79 chr15 91179029 91179168 -12315806 + B1F2 SINE Alu 9 138 -11 2 1280 215 51 0 71 chr15 91181227 91181269 -12313705 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 2 1280 210 87 87 0 chr15 91181269 91181315 -12313659 + (CAAAC)n Simple_repeat Simple_repeat 2 51 0 2 1280 273 29 0 0 chr15 91183399 91183433 -12311541 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1280 422 216 27 0 chr15 91184136 91184247 -12310727 + Lx9 LINE L1 7521 7634 -10 2 1280 528 16 0 0 chr15 91184967 91185028 -12309946 + (GA)n Simple_repeat Simple_repeat 2 62 0 2 1280 353 289 216 27 chr15 91185780 91186072 -12308902 + Tigger13a DNA MER2_type 218 564 -207 2 1280 749 300 40 70 chr15 91187877 91188175 -12306799 - B4A SINE B4 -3 289 1 2 1280 332 164 15 0 chr15 91188656 91188723 -12306251 + (CAA)n Simple_repeat Simple_repeat 2 69 0 2 1280 22 0 0 0 chr15 91188762 91188784 -12306190 + AT_rich Low_complexity Low_complexity 1 22 0 2 1280 525 193 0 0 chr15 91189748 91189893 -12305081 + (CA)n Simple_repeat Simple_repeat 2 146 0 2 1280 371 304 35 35 chr15 91190237 91190380 -12304594 - B1F SINE Alu -2 147 5 2 1280 310 265 114 63 chr15 91191629 91191907 -12303067 + MLT1D LTR MaLR 117 441 -64 2 1280 756 186 31 38 chr15 91191934 91192122 -12302852 + B3 SINE B2 1 190 -5 2 1280 408 324 105 44 chr15 91192684 91192865 -12302109 - RMER30 DNA MER1_type 0 202 11 2 1280 243 361 82 0 chr15 91193608 91193705 -12301269 + PB1D10 SINE Alu 11 115 -2 2 1280 4124 181 19 4 chr15 91194070 91194818 -12300156 - Lx2B LINE L1 -222 6778 6020 2 1280 4102 143 22 26 chr15 91194817 91195693 -12299281 + Lx2B LINE L1 5138 6010 -990 2 1280 4196 259 55 44 chr15 91195694 91197067 -12297907 - MYSERV6-int LTR ERVK -6687 2272 884 2 1280 240 100 0 0 chr15 91197246 91197286 -12297688 + (GA)n Simple_repeat Simple_repeat 1 40 0 2 1280 860 164 0 14 chr15 91198575 91198723 -12296251 + B1_Mus1 SINE Alu 3 148 0 2 1280 543 136 0 26 chr15 91198725 91198838 -12296136 + GA-rich Low_complexity Low_complexity 3 112 0 2 1280 389 280 19 0 chr15 91199220 91199327 -12295647 + MER3 DNA MER1_type 2 110 -99 2 1280 429 351 64 30 chr15 91200151 91200418 -12294556 + MamRep137 DNA TcMar? 140 415 -29 2 1280 216 67 0 0 chr15 91201416 91201446 -12293528 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2 1280 1218 63 0 0 chr15 91201447 91201589 -12293385 - B1_Mus1 SINE Alu -6 142 1 2 1280 621 80 0 0 chr15 91202005 91202093 -12292881 + (CA)n Simple_repeat Simple_repeat 2 89 0 2 1280 465 321 55 37 chr15 91202432 91202649 -12292325 - MER68 LTR ERVL -230 333 113 2 1280 387 0 0 0 chr15 91202956 91202999 -12291975 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1280 651 172 0 0 chr15 91203044 91203143 -12291831 - B2_Mm2 SINE B2 -96 99 1 2 1280 748 141 6 51 chr15 91203227 91203384 -12291590 - Lx4A LINE L1 0 7058 6909 2 1280 222 254 0 16 chr15 91203422 91203486 -12291488 - B1F2 SINE Alu -81 68 6 2 1280 423 0 0 0 chr15 91204856 91204903 -12290071 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1280 338 68 0 0 chr15 91206822 91206866 -12288108 - URR1B DNA MER1_type 0 225 182 2 1280 1161 299 61 15 chr15 91206963 91207422 -12287552 - Lx8 LINE L1 -863 6610 6131 2 1280 500 309 23 6 chr15 91208173 91208349 -12286625 - B3A SINE B2 -16 182 4 2 1280 229 151 34 23 chr15 91208459 91208547 -12286427 + (TA)n Simple_repeat Simple_repeat 1 89 0 2 1280 1754 211 28 33 chr15 91208617 91209077 -12285897 + Lx9 LINE L1 7187 7644 0 2 1280 329 197 0 0 chr15 91210421 91210482 -12284492 - B3 SINE B2 -155 61 1 2 1280 1024 279 35 36 chr15 91211060 91211501 -12283473 - RMER15 LTR ERVL -12 563 1 2 1280 843 291 65 72 chr15 91211524 91211927 -12283047 - RMER15-int LTR ERVL -67 4932 4533 2 1280 1133 276 147 43 chr15 91211973 91212725 -12282249 + RMER12B LTR ERVK 1 974 -430 2 1280 305 158 105 0 chr15 91212809 91212866 -12282108 + RMER12B LTR ERVK 1342 1404 0 2 1280 420 283 101 44 chr15 91212866 91213025 -12281949 - RMER15-int LTR ERVL -517 4482 4315 2 1280 715 336 41 86 chr15 91213025 91213491 -12281483 - RMER15-int LTR ERVL -2833 2166 1722 2 1280 440 35 17 0 chr15 91213491 91213549 -12281425 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2 1280 1786 318 71 54 chr15 91213730 91213914 -12281060 - RMER15-int LTR ERVL -3967 1032 851 2 1280 696 292 57 92 chr15 91213914 91214303 -12280671 + MTE2a LTR MaLR 1 375 -4 2 1280 1786 318 71 54 chr15 91214303 91215133 -12279841 - RMER15-int LTR ERVL -4149 850 2 2 1280 417 335 103 11 chr15 91215190 91215374 -12279600 - RMER15 LTR ERVL -91 484 284 2 1280 1987 132 127 14 chr15 91215440 91215794 -12279180 - ORR1B1 LTR MaLR 0 394 1 2 1280 754 195 55 0 chr15 91215867 91215995 -12278979 + B1_Mur2 SINE Alu 3 137 -12 2 1280 310 346 48 19 chr15 91216089 91216295 -12278679 - HAL1 LINE L1 -723 1784 1573 3 1280 394 249 238 56 chr15 91216315 91216558 -12278416 + B4 SINE B4 6 292 0 3 1280 216 0 0 0 chr15 91217104 91217128 -12277846 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1280 270 0 0 0 chr15 91218035 91218065 -12276909 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 3 1280 1327 103 11 16 chr15 91218071 91218258 -12276716 + B2_Mm1t SINE B2 2 187 -6 3 1280 234 0 0 0 chr15 91218592 91218618 -12276356 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1280 1553 218 70 38 chr15 91219379 91219751 -12275223 - RLTR41 LTR ERV1 -62 384 1 3 1280 432 292 29 17 chr15 91219888 91220062 -12274912 - MURVY-int LTR ERV1 -93 7359 7184 3 1280 859 152 63 58 chr15 91220864 91221038 -12273936 - RLTR41 LTR ERV1 0 446 272 3 1280 848 232 75 35 chr15 91221043 91221244 -12273730 - B3 SINE B2 -5 211 3 3 1280 999 103 0 0 chr15 91221266 91221412 -12273562 + (TCC)n Simple_repeat Simple_repeat 2 147 0 3 1280 221 0 0 33 chr15 91221736 91221766 -12273208 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 3 1280 1274 54 7 0 chr15 91221770 91221917 -12273057 - B1_Mus1 SINE Alu 0 148 1 3 1280 24 0 0 0 chr15 91222453 91222477 -12272497 + AT_rich Low_complexity Low_complexity 1 24 0 3 1280 4005 89 23 92 chr15 91223505 91224124 -12270850 + L1_Mus4 LINE L1 6060 6635 -1 3 1280 252 271 0 0 chr15 91225181 91225240 -12269734 + RMER15 LTR ERVL 1 59 -516 3 1280 369 0 0 0 chr15 91225298 91225339 -12269635 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1280 221 310 0 11 chr15 91225411 91225499 -12269475 + (TG)n Simple_repeat Simple_repeat 2 88 0 3 1280 1680 244 58 72 chr15 91225526 91225896 -12269078 + RMER15 LTR ERVL 83 457 -118 3 19 5347 59 2 11 chr15 91225896 91226531 -12268443 + L1Md_F2 LINE L1 5941 6569 -13 3 1281 1680 244 58 72 chr15 91226531 91226542 -12268432 + RMER15 LTR ERVL 458 458 -117 3 1281 219 36 0 0 chr15 91226542 91226570 -12268404 + (CAA)n Simple_repeat Simple_repeat 3 30 0 3 1281 1680 244 58 72 chr15 91226570 91226687 -12268287 + RMER15 LTR ERVL 458 575 0 3 1281 1627 51 10 0 chr15 91228583 91228779 -12266195 + L1_Mus1 LINE L1 6370 6567 0 3 1281 2402 195 105 10 chr15 91228999 91229591 -12265383 + RLTR40 LTR ERVK 1 648 -169 3 1281 1675 190 91 13 chr15 91229599 91229993 -12264981 + RMER10A LTR ERVL 1 425 -17 3 1281 396 0 0 0 chr15 91229996 91230040 -12264934 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 1281 853 220 42 16 chr15 91230052 91230241 -12264733 + RLTR40 LTR ERVK 620 813 -4 3 1281 354 279 0 0 chr15 91230260 91230339 -12264635 + PB1D7 SINE Alu 24 102 -18 3 1281 2048 197 121 38 chr15 91231297 91231706 -12263268 + Lx9 LINE L1 7079 7474 -170 3 1281 237 33 0 0 chr15 91231706 91231736 -12263238 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1281 2048 197 121 38 chr15 91231736 91231848 -12263126 + Lx9 LINE L1 7475 7642 -2 3 1281 223 308 12 60 chr15 91232059 91232142 -12262832 + L2 LINE L2 540 618 -2801 3 1281 624 281 75 82 chr15 91233505 91233799 -12261175 + B4A SINE B4 1 292 0 3 1281 192 245 0 0 chr15 91233801 91233854 -12261120 + (CATATA)n Simple_repeat Simple_repeat 6 58 0 3 1281 1713 232 119 44 chr15 91234253 91234314 -12260660 - RMER2 LTR ERV1 0 567 504 3 1281 3734 35 0 14 chr15 91234314 91234742 -12260232 - L1Md_F2 LINE L1 -12 6570 6149 3 1281 1713 232 119 44 chr15 91234742 91235207 -12259767 - RMER2 LTR ERV1 -64 503 1 3 1281 22 0 0 0 chr15 91235827 91235849 -12259125 + AT_rich Low_complexity Low_complexity 1 22 0 3 1281 322 291 4 8 chr15 91236186 91236458 -12258516 + (CA)n Simple_repeat Simple_repeat 1 270 0 3 1281 497 171 11 28 chr15 91236477 91236657 -12258317 + (CA)n Simple_repeat Simple_repeat 2 178 0 3 1281 320 93 0 115 chr15 91236698 91236759 -12258215 + HAL1-3A_ME LINE L1 1976 2029 -829 3 1281 192 77 0 0 chr15 91237702 91237728 -12257246 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 3 1281 23 0 0 0 chr15 91237855 91237878 -12257096 + AT_rich Low_complexity Low_complexity 1 23 0 3 1281 441 54 0 0 chr15 91237878 91237934 -12257040 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 1281 294 106 0 0 chr15 91238523 91238570 -12256404 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 1281 21 0 0 0 chr15 91238591 91238612 -12256362 + AT_rich Low_complexity Low_complexity 1 21 0 3 1281 193 91 68 0 chr15 91238626 91238670 -12256304 + A-rich Low_complexity Low_complexity 1 47 0 3 1281 324 0 0 0 chr15 91238682 91238718 -12256256 + (CAA)n Simple_repeat Simple_repeat 2 37 0 3 1281 1130 235 5 0 chr15 91239538 91239751 -12255223 + B3 SINE B2 3 216 0 3 1281 539 148 20 0 chr15 91239782 91239883 -12255091 + Lx4B LINE L1 6952 7054 -4 3 1281 1481 314 80 28 chr15 91239907 91240320 -12254654 + L1MA4A LINE L1 2725 3146 -2994 3 1281 323 60 0 20 chr15 91240320 91240371 -12254603 + (TGAA)n Simple_repeat Simple_repeat 3 52 0 3 1281 1481 298 115 63 chr15 91240371 91242046 -12252928 + L1MA4A LINE L1 3147 6004 -176 3 1281 872 19 9 0 chr15 91242249 91242356 -12252618 + B1_Mus2 SINE Alu 40 147 0 3 1281 184 77 25 25 chr15 91242356 91242396 -12252578 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 3 1281 682 84 19 0 chr15 91243075 91243182 -12251792 + (GA)n Simple_repeat Simple_repeat 2 110 0 3 1281 447 19 0 0 chr15 91243182 91243234 -12251740 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 3 1281 453 320 58 7 chr15 91243413 91243567 -12251407 + RSINE1 SINE B4 4 165 0 3 1281 298 327 88 25 chr15 91246070 91246274 -12248700 - ID_B1 SINE B4 -7 217 1 3 1281 320 267 109 22 chr15 91246614 91246752 -12248222 - B3 SINE B2 0 216 67 3 1281 239 226 92 35 chr15 91247192 91247279 -12247695 + RMER10A LTR ERVL 318 409 -33 3 1281 247 278 118 6 chr15 91247591 91247761 -12247213 + L1MD LINE L1 3061 3249 -2897 3 1281 339 121 0 0 chr15 91248026 91248084 -12246890 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 1281 186 71 0 0 chr15 91248171 91248199 -12246775 + (TGGA)n Simple_repeat Simple_repeat 1 28 0 3 1281 532 274 35 49 chr15 91248217 91248359 -12246615 - RSINE1 SINE B4 -23 142 3 3 1281 471 290 159 36 chr15 91249012 91249202 -12245772 + B3A SINE B2 1 208 -8 3 1281 288 242 0 0 chr15 91249227 91249322 -12245652 + (CA)n Simple_repeat Simple_repeat 2 96 0 3 1281 321 194 0 16 chr15 91249322 91249385 -12245589 + HAL1-3A_ME LINE L1 1975 2036 -822 3 1281 2619 101 63 25 chr15 91249914 91250310 -12244664 + IAPLTR2a LTR ERVK 1 411 0 3 1281 1073 114 10 83 chr15 91250378 91250570 -12244404 + IAPEz-int LTR ERVK 18 195 -6286 3 1281 228 321 0 0 chr15 91250570 91250623 -12244351 + RLTR27 LTR ERVK 223 275 -34 3 1281 291 81 0 0 chr15 91250623 91250660 -12244314 + IAPEz-int LTR ERVK 145 181 -7400 3 1281 231 273 0 0 chr15 91250660 91250704 -12244270 + RLTR27 LTR ERVK 232 275 -34 3 1281 3914 61 2 18 chr15 91250704 91251207 -12243767 + IAPEz-int LTR ERVK 168 662 -5819 3 1281 2258 58 0 4 chr15 91251207 91251486 -12243488 + IAPEz-int LTR ERVK 1359 1636 -4845 3 1281 6377 28 4 12 chr15 91251485 91252235 -12242739 + IAPEz-int LTR ERVK 5736 6479 -2 3 1281 2619 101 63 25 chr15 91252237 91252633 -12242341 + IAPLTR2a LTR ERVK 1 411 0 3 1281 3336 58 5 2 chr15 91253990 91254385 -12240589 + MTA_Mm LTR MaLR 1 396 0 3 1281 222 239 27 27 chr15 91254654 91254727 -12240247 + (CATATA)n Simple_repeat Simple_repeat 6 78 0 3 1281 757 0 21 0 chr15 91254732 91254825 -12240149 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 3 1281 338 234 0 9 chr15 91254825 91254933 -12240041 + (CA)n Simple_repeat Simple_repeat 2 108 0 3 1281 180 111 0 0 chr15 91256994 91257021 -12237953 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 1281 368 275 0 24 chr15 91257212 91257294 -12237680 + ID4_ SINE ID 2 81 -2 3 1281 200 238 0 0 chr15 91257763 91257805 -12237169 + A-rich Low_complexity Low_complexity 1 42 0 3 1281 200 311 33 0 chr15 91258056 91258117 -12236857 + GA-rich Low_complexity Low_complexity 5 67 0 3 1281 376 287 55 128 chr15 91258342 91258506 -12236468 + RSINE1 SINE B4 13 164 -1 3 1281 229 241 71 60 chr15 91258590 91258674 -12236300 + RMER15 LTR ERVL 71 155 -420 3 1281 568 298 81 31 chr15 91258719 91258941 -12236033 + RMER15 LTR ERVL 340 572 -3 3 1281 2878 165 27 69 chr15 91259219 91259771 -12235203 + RLTR24 LTR ERV1 1 529 0 3 1281 1710 259 55 136 chr15 91260734 91261732 -12233242 - L1_Mur3 LINE L1 -2965 2915 1999 3 1281 891 153 25 13 chr15 91261734 91261893 -12233081 + ORR1B2 LTR MaLR 207 367 0 3 1281 1182 257 60 74 chr15 91261894 91261960 -12233014 - L1_Mur3 LINE L1 -4017 1863 1803 3 1281 2231 194 21 57 chr15 91261960 91262397 -12232577 - MTC LTR MaLR 0 421 1 3 1281 1182 257 60 74 chr15 91262397 91262982 -12231992 - L1_Mur3 LINE L1 -4078 1802 1221 3 1281 2759 215 100 14 chr15 91263147 91264263 -12230711 - Lx7 LINE L1 -229 7467 6257 3 1281 570 29 0 0 chr15 91264283 91264351 -12230623 + (TC)n Simple_repeat Simple_repeat 1 68 0 3 1281 2146 277 125 35 chr15 91264351 91265539 -12229435 - L1_Rod LINE L1 -2561 3286 1992 3 1281 4283 167 58 53 chr15 91265569 91266542 -12228432 + RLTR22_Mur LTR ERVK 1 977 -871 3 1281 231 85 104 119 chr15 91266603 91266670 -12228304 + RLTR22_Mur LTR ERVK 822 887 -961 3 1281 765 165 309 9 chr15 91266757 91266977 -12227997 + RLTR22_Mur LTR ERVK 1563 1848 0 3 1281 2647 230 38 29 chr15 91266978 91267790 -12227184 - L1_Rod LINE L1 -3845 2002 1178 3 1281 1465 206 14 10 chr15 91267790 91268085 -12226889 + RLTR40 LTR ERVK 1 296 -521 3 1281 366 23 0 0 chr15 91268093 91268136 -12226838 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1281 1824 241 58 22 chr15 91268149 91268653 -12226321 + RLTR40 LTR ERVK 285 806 -11 3 1281 610 289 24 32 chr15 91268656 91268906 -12226068 - L1_Rod LINE L1 -6460 1148 901 3 1281 190 0 0 62 chr15 91269836 91269868 -12225106 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 3 1281 21 0 0 0 chr15 91270998 91271019 -12223955 + AT_rich Low_complexity Low_complexity 1 21 0 3 1281 244 200 16 32 chr15 91271374 91271436 -12223538 - MT2A LTR ERVL 0 584 524 3 1281 194 244 0 23 chr15 91271436 91271524 -12223450 + (CAGAGA)n Simple_repeat Simple_repeat 1 86 0 3 1281 497 234 0 0 chr15 91271535 91271629 -12223345 - MT2A LTR ERVL -71 462 369 3 1281 1603 192 3 69 chr15 91271636 91271971 -12223003 - MERVL_2A-int LTR ERVL -1261 4500 4188 3 1281 268 347 17 8 chr15 91271971 91272090 -12222884 - L2 LINE L2 -1178 2241 2122 3 1281 330 261 0 22 chr15 91272091 91272181 -12222793 + GA-rich Low_complexity Low_complexity 2 89 0 3 1281 295 204 0 3 chr15 91272880 91272943 -12222031 + Lx8 LINE L1 5660 5755 -1941 3 1281 434 323 85 42 chr15 91273110 91273369 -12221605 + Lx8 LINE L1 6172 6441 -1032 3 1281 1132 92 14 0 chr15 91273372 91273513 -12221461 + B1_Mus1 SINE Alu 2 144 -4 3 1281 882 121 0 0 chr15 91273513 91273679 -12221295 + (GA)n Simple_repeat Simple_repeat 1 166 0 3 1281 303 257 130 28 chr15 91273700 91273808 -12221166 + MTD LTR MaLR 301 419 0 3 1281 333 0 0 0 chr15 91274759 91274796 -12220178 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 1281 1045 82 52 0 chr15 91274800 91274935 -12220039 - B1_Mm SINE Alu -5 142 1 3 1281 186 160 0 0 chr15 91274935 91274985 -12219989 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1281 225 154 0 0 chr15 91274982 91275021 -12219953 + T-rich Low_complexity Low_complexity 6 44 0 3 1281 482 175 19 0 chr15 91275034 91275137 -12219837 + (TATG)n Simple_repeat Simple_repeat 2 106 0 4 1281 326 289 122 16 chr15 91275143 91275266 -12219708 - B1F2 SINE Alu -9 140 5 4 1281 29 0 0 0 chr15 91276433 91276462 -12218512 + AT_rich Low_complexity Low_complexity 1 29 0 4 1281 395 309 10 0 chr15 91276551 91276648 -12218326 - RSINE1 SINE B4 -25 140 43 4 1281 3424 164 146 8 chr15 91278053 91278661 -12216313 + RLTR17 LTR ERVK 1 692 0 4 1281 27592 121 34 14 chr15 91278889 91280797 -12214177 + Lx4A LINE L1 879 2815 -3062 4 1281 1149 80 7 0 chr15 91280797 91280935 -12214039 + B1_Mm SINE Alu 1 139 -8 4 1281 27592 131 35 16 chr15 91280935 91285069 -12209905 + Lx4A LINE L1 2816 7056 -2 4 1281 895 163 43 58 chr15 91285811 91286017 -12208957 - B3 SINE B2 -2 214 1 4 1281 451 303 96 53 chr15 91286505 91286693 -12208281 - ORR1D2 LTR MaLR -168 202 7 4 1281 225 291 16 108 chr15 91286692 91286783 -12208191 - Tigger7 DNA MER2_type -71 2420 2346 4 1281 1068 179 16 0 chr15 91286783 91286973 -12208001 + B2_Mm2 SINE B2 2 194 -1 4 1281 225 291 16 108 chr15 91286973 91287066 -12207908 - Tigger7 DNA MER2_type -146 2345 2253 4 1281 311 314 12 0 chr15 91287064 91287150 -12207824 - Tigger7 DNA MER2_type -2403 88 2 4 1281 793 236 42 17 chr15 91287321 91287524 -12207450 + B3A SINE B2 2 190 -26 4 1281 306 289 47 67 chr15 91288047 91288240 -12206734 + L2a LINE L2 2367 2555 -864 4 1281 233 254 31 16 chr15 91288381 91288445 -12206529 - B4 SINE B4 -211 81 17 4 1281 217 336 87 32 chr15 91289114 91289240 -12205734 + L2a LINE L2 3294 3426 0 4 1281 712 182 0 18 chr15 91289708 91289876 -12205098 + GA-rich Low_complexity Low_complexity 3 167 0 4 1281 258 241 36 60 chr15 91289915 91289999 -12204975 + RMER4B LTR ERVK 333 414 -171 4 1281 522 0 0 0 chr15 91290337 91290395 -12204579 + (TTTC)n Simple_repeat Simple_repeat 1 58 0 4 1281 358 170 5 88 chr15 91290669 91290959 -12204015 + G-rich Low_complexity Low_complexity 1 265 0 4 1281 186 103 0 0 chr15 91291846 91291875 -12203099 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 1281 24 77 0 0 chr15 91291994 91292046 -12202928 + AT_rich Low_complexity Low_complexity 1 52 0 4 1281 782 264 18 36 chr15 91292778 91292998 -12201976 + MTD LTR MaLR 3 218 -201 4 1281 1591 203 51 10 chr15 91293009 91293413 -12201561 + Lx7 LINE L1 5552 5985 -1711 4 1281 611 314 119 43 chr15 91293470 91293773 -12201201 - MLT1B LTR MaLR -12 378 53 4 1281 219 259 37 0 chr15 91294072 91294126 -12200848 + B4 SINE B4 2 57 -235 4 1281 678 313 74 10 chr15 91294427 91294630 -12200344 + B3 SINE B2 1 216 0 4 1281 989 88 0 7 chr15 91295351 91295488 -12199486 - B2_Mm2 SINE B2 -58 137 2 4 1281 209 323 84 21 chr15 91295576 91295671 -12199303 + L4 LINE RTE 1709 1809 -220 4 1281 2725 254 103 35 chr15 91295685 91296595 -12198379 + RCHARR1 DNA MER1_type 3 974 0 4 1281 468 0 0 0 chr15 91297363 91297415 -12197559 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1281 3150 120 24 15 chr15 91297786 91298242 -12196732 + RMER6B LTR ERVK 2 461 0 4 1281 817 299 18 5 chr15 91298988 91299210 -12195764 + B4A SINE B4 2 226 -66 4 1281 392 37 19 0 chr15 91299260 91299314 -12195660 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1281 1437 224 35 124 chr15 91300151 91300554 -12194420 + ORR1D1 LTR MaLR 8 374 0 4 1281 5657 221 32 41 chr15 91300582 91301925 -12193049 + ORR1D1-int LTR MaLR 40 1370 0 4 1281 1159 234 25 98 chr15 91301925 91302207 -12192767 + ORR1D1 LTR MaLR 1 258 -116 4 1281 1989 214 76 39 chr15 91302207 91302633 -12192341 + RLTR20C LTR ERVK 1 432 -102 4 1281 561 42 0 0 chr15 91302633 91302705 -12192269 + (TG)n Simple_repeat Simple_repeat 2 73 0 4 1281 1989 214 76 39 chr15 91302705 91302793 -12192181 + RLTR20C LTR ERVK 433 533 -1 4 1281 590 179 59 17 chr15 91302793 91302904 -12192070 + ORR1D1 LTR MaLR 269 384 0 4 1281 2519 113 37 73 chr15 91303880 91304289 -12190685 - ORR1B1 LTR MaLR 0 394 1 4 1281 514 309 39 72 chr15 91305542 91305821 -12189153 + MLT1E2 LTR MaLR 64 333 -294 4 1281 931 329 20 23 chr15 91305912 91306350 -12188624 + L1MC3 LINE L1 7338 7774 -11 4 1281 373 268 35 40 chr15 91306490 91306749 -12188225 + L1MA4 LINE L1 5278 5571 -729 4 1281 252 176 78 0 chr15 91306749 91306800 -12188174 + B3A SINE B2 8 62 -136 4 1281 1414 99 52 82 chr15 91306815 91307047 -12187927 - L1_Mus2 LINE L1 -1 6565 6341 4 1281 3687 91 6 0 chr15 91307051 91307558 -12187416 + L1_Mm LINE L1 3703 4212 -1671 4 1281 380 340 15 20 chr15 91307569 91307770 -12187204 + L1MA4 LINE L1 5732 5931 -369 4 1281 409 62 15 15 chr15 91308043 91308109 -12186865 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 1281 301 321 0 45 chr15 91308144 91308255 -12186719 - MTE2b LTR MaLR -87 292 187 4 1281 484 314 38 6 chr15 91308277 91308437 -12186537 - MER20 DNA MER1_type -53 166 2 4 1281 271 189 38 63 chr15 91308931 91309010 -12185964 + ID2 SINE ID 7 83 0 4 1281 262 194 119 0 chr15 91310008 91310075 -12184899 + MER34 LTR ERV1 378 452 -90 4 1281 21 0 0 0 chr15 91311174 91311195 -12183779 + AT_rich Low_complexity Low_complexity 1 21 0 4 1281 276 243 0 0 chr15 91311467 91311541 -12183433 + (TATG)n Simple_repeat Simple_repeat 2 75 0 4 1281 2714 168 55 59 chr15 91311845 91312407 -12182567 + RLTR31_Mm LTR ERVK 2 561 0 4 1281 216 0 0 0 chr15 91312964 91312988 -12181986 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1281 1172 75 0 33 chr15 91313018 91313169 -12181805 - B1_Mus2 SINE Alu -1 146 1 4 1281 209 238 16 16 chr15 91313506 91313570 -12181404 + (CATA)n Simple_repeat Simple_repeat 3 66 0 4 1281 420 270 127 100 chr15 91313579 91314090 -12180884 + L1M2 LINE L1 4438 4962 -1181 4 1281 909 280 98 41 chr15 91314098 91314662 -12180312 + L1M2 LINE L1 5152 5748 -543 4 1281 2047 175 126 14 chr15 91314672 91314911 -12180063 - L1_Mur3 LINE L1 -759 5121 4867 4 1281 366 123 0 0 chr15 91314911 91314968 -12180006 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 1281 2047 175 126 14 chr15 91314968 91315163 -12179811 - L1_Mur3 LINE L1 -1014 4866 4645 4 1281 1067 124 6 0 chr15 91315163 91315340 -12179634 + (TC)n Simple_repeat Simple_repeat 2 179 0 4 1281 2047 175 126 14 chr15 91315340 91315390 -12179584 - L1_Mur3 LINE L1 -1236 4644 4584 4 1281 2002 237 29 40 chr15 91315388 91315911 -12179063 + Lx7 LINE L1 7010 7526 -170 4 1281 5231 58 56 0 chr15 91315976 91316615 -12178359 + Lx3_Mus LINE L1 6335 7009 0 4 1281 1423 72 0 40 chr15 91316832 91317034 -12177940 - B2_Mm2 SINE B2 -1 194 1 4 1281 323 304 138 32 chr15 91317406 91317925 -12177049 - L1MB7 LINE L1 -181 5997 5412 4 1281 1130 212 232 4 chr15 91318239 91318576 -12176398 - MTD LTR MaLR -14 405 3 4 1281 970 306 38 32 chr15 91318598 91319104 -12175870 - L1MB7 LINE L1 -1206 4940 4432 4 1281 279 346 64 27 chr15 91320126 91320236 -12174738 + B1F1 SINE Alu 6 119 -30 4 1281 225 255 0 0 chr15 91320247 91320294 -12174680 + (ATG)n Simple_repeat Simple_repeat 3 49 0 4 1281 208 222 0 0 chr15 91320732 91320768 -12174206 + polypyrimidine Low_complexity Low_complexity 1 36 0 4 1281 231 204 0 0 chr15 91320768 91320817 -12174157 + T-rich Low_complexity Low_complexity 1 49 0 4 1281 216 0 0 0 chr15 91321000 91321024 -12173950 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1281 253 131 16 16 chr15 91321085 91321147 -12173827 + (TA)n Simple_repeat Simple_repeat 1 62 0 4 1281 236 329 14 0 chr15 91322621 91322694 -12172280 + ID4 SINE ID 6 79 -4 4 1281 23 0 0 0 chr15 91322723 91322746 -12172228 + AT_rich Low_complexity Low_complexity 1 23 0 4 1281 395 298 21 160 chr15 91323462 91323650 -12171324 + RSINE1 SINE B4 4 165 0 4 1281 788 207 43 29 chr15 91324777 91324986 -12169988 - RLTR15 LTR ERVK -131 228 17 4 1281 207 0 0 0 chr15 91325269 91325292 -12169682 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1281 414 285 0 163 chr15 91326682 91326854 -12168120 + ID_B1 SINE B4 81 224 0 4 1281 23 0 0 0 chr15 91326870 91326893 -12168081 + AT_rich Low_complexity Low_complexity 1 23 0 4 1281 242 368 37 28 chr15 91329626 91329735 -12165239 - PB1D10 SINE Alu -6 111 2 4 1281 1196 73 127 6 chr15 91329781 91329946 -12165028 - B2_Mm2 SINE B2 -9 186 2 4 1281 1215 58 0 0 chr15 91330269 91330406 -12164568 + B1_Mus2 SINE Alu 2 138 -9 4 1281 243 0 0 0 chr15 91330406 91330433 -12164541 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1281 188 313 14 72 chr15 91330657 91330726 -12164248 + MIRm SINE MIR 199 263 -13 4 1281 4649 156 41 62 chr15 91331270 91332156 -12162818 - Lx2A1 LINE L1 -1 7007 6141 4 1281 388 283 34 67 chr15 91333204 91333382 -12161592 - MER5B DNA MER1_type -4 174 3 4 1281 283 314 16 24 chr15 91334101 91334228 -12160746 - MIR SINE MIR -29 233 108 4 1281 377 212 50 0 chr15 91334685 91334765 -12160209 - PB1D7 SINE Alu -1 119 36 4 1281 1834 301 94 33 chr15 91335331 91336203 -12158771 + MTE-int LTR MaLR 595 1519 -61 4 1281 2707 51 43 3 chr15 91336463 91336836 -12158138 + MTB LTR MaLR 13 400 0 4 1281 338 292 11 0 chr15 91337887 91337976 -12156998 + B3A SINE B2 4 93 -105 4 1281 396 118 0 0 chr15 91338003 91338071 -12156903 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 1281 779 179 12 3 chr15 91338247 91338560 -12156414 + GA-rich Low_complexity Low_complexity 1 315 0 4 1281 368 83 0 0 chr15 91338560 91338608 -12156366 + (GAAA)n Simple_repeat Simple_repeat 4 51 0 4 1281 1326 78 0 0 chr15 91338610 91338790 -12156184 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 1281 483 266 43 0 chr15 91339495 91339634 -12155340 + ID_B1 SINE B4 80 224 0 4 1281 234 176 0 0 chr15 91340466 91340517 -12154457 + CT-rich Low_complexity Low_complexity 3 53 0 4 1281 699 125 33 7 chr15 91340560 91340680 -12154294 + CT-rich Low_complexity Low_complexity 35 159 0 4 1281 941 111 6 17 chr15 91340680 91340855 -12154119 + (TCC)n Simple_repeat Simple_repeat 3 175 0 4 1281 699 125 33 7 chr15 91340855 91340887 -12154087 + polypyrimidine Low_complexity Low_complexity 4 34 0 4 1281 246 311 102 15 chr15 91340925 91341062 -12153912 - B4 SINE B4 -63 229 81 4 1281 308 237 124 0 chr15 91341418 91341515 -12153459 - L1MC1 LINE L1 -223 6110 6002 4 1281 1141 209 5 9 chr15 91342331 91342548 -12152426 + B3 SINE B2 1 216 0 4 1281 607 216 0 0 chr15 91342814 91342925 -12152049 + Lx9 LINE L1 6352 6462 -1182 4 1281 578 136 0 19 chr15 91342932 91343000 -12151974 + polypurine Low_complexity Low_complexity 3 70 0 4 1281 1112 114 6 0 chr15 91343000 91343176 -12151798 + (GAA)n Simple_repeat Simple_repeat 3 179 0 5 1281 578 136 0 19 chr15 91343176 91343212 -12151762 + polypurine Low_complexity Low_complexity 71 105 0 5 1281 5360 193 55 33 chr15 91343214 91344352 -12150622 + Lx9 LINE L1 6483 7644 0 4 1281 1761 98 8 0 chr15 91344366 91344621 -12150353 + Lx2 LINE L1 6741 6997 0 5 1281 412 226 16 0 chr15 91345300 91345424 -12149550 + (TA)n Simple_repeat Simple_repeat 1 126 0 5 1281 201 161 17 35 chr15 91345490 91345548 -12149426 + (TTATA)n Simple_repeat Simple_repeat 3 59 0 5 1281 21 71 0 0 chr15 91347120 91347162 -12147812 + AT_rich Low_complexity Low_complexity 1 42 0 5 1281 221 213 49 0 chr15 91347190 91347251 -12147723 - ID_B1 SINE B4 -63 161 98 5 1281 1404 88 10 0 chr15 91347371 91347563 -12147411 + B2_Mm2 SINE B2 1 194 -1 5 1281 4103 84 2 7 chr15 91347563 91348127 -12146847 + Lx LINE L1 6093 6653 -1 5 1281 305 322 50 0 chr15 91349919 91350040 -12144934 + MIR SINE MIR 68 194 -68 5 1281 213 132 0 26 chr15 91351085 91351124 -12143850 + GA-rich Low_complexity Low_complexity 2 39 0 5 1281 752 186 0 15 chr15 91351275 91351411 -12143563 + B1_Mur3 SINE Alu 10 143 -6 5 1281 356 200 12 0 chr15 91351427 91351512 -12143462 + GA-rich Low_complexity Low_complexity 3 88 0 5 1281 5015 52 10 6 chr15 91352638 91353259 -12141715 + L1Md_F2 LINE L1 5949 6571 -11 5 1281 280 388 18 0 chr15 91353988 91354158 -12140816 + (TATATG)n Simple_repeat Simple_repeat 2 174 0 5 1281 283 368 29 0 chr15 91354254 91354428 -12140546 + (TATATG)n Simple_repeat Simple_repeat 1 179 0 5 1281 788 327 39 28 chr15 91354479 91354762 -12140212 - B4A SINE B4 -6 286 1 5 1281 1143 100 0 0 chr15 91355707 91355949 -12139025 + (TG)n Simple_repeat Simple_repeat 1 242 0 5 1281 267 104 0 0 chr15 91356334 91356382 -12138592 + (T)n Simple_repeat Simple_repeat 1 48 0 5 1281 920 139 0 27 chr15 91356423 91356608 -12138366 + GA-rich Low_complexity Low_complexity 1 180 0 5 1282 593 346 53 31 chr15 91357213 91357631 -12137343 + MT2A LTR ERVL 2 428 -105 5 1282 1331 208 154 22 chr15 91357750 91358119 -12136855 + MTD LTR MaLR 2 419 0 5 1282 190 116 23 23 chr15 91358126 91358170 -12136804 + CT-rich Low_complexity Low_complexity 5 48 0 5 1282 607 29 0 63 chr15 91358340 91358451 -12136523 + (TTTTG)n Simple_repeat Simple_repeat 2 105 0 5 1282 378 286 0 0 chr15 91358473 91358578 -12136396 + B1F2 SINE Alu 45 149 0 5 1282 329 323 10 0 chr15 91358677 91358776 -12136198 + LTR40b LTR ERVL 363 462 0 5 1282 22 35 0 0 chr15 91358812 91358841 -12136133 + AT_rich Low_complexity Low_complexity 1 29 0 5 1282 191 250 0 27 chr15 91358963 91359037 -12135937 + (TATATG)n Simple_repeat Simple_repeat 3 74 0 5 1282 460 325 34 58 chr15 91359157 91359453 -12135521 + ORR1D2 LTR MaLR 88 366 -4 5 1282 3316 61 0 12 chr15 91360928 91361340 -12133634 + MTB_Mm LTR MaLR 1 407 0 5 1282 1889 62 29 0 chr15 91362847 91363115 -12131859 - L1_Mus1 LINE L1 0 6567 6313 5 1282 3867 189 67 14 chr15 91363115 91363597 -12131377 - L1_Mur3 LINE L1 -140 5740 5229 5 1282 495 0 0 0 chr15 91363597 91363652 -12131322 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1282 3867 189 67 14 chr15 91363652 91364008 -12130966 - L1_Mur3 LINE L1 -652 5228 4858 5 1282 3272 186 24 3 chr15 91364002 91364626 -12130348 - L1_Mur3 LINE L1 -1722 4158 3522 5 1282 877 211 22 11 chr15 91364670 91364852 -12130122 + MERVL_2A-int LTR ERVL 2908 3091 -2670 5 1282 8821 226 54 34 chr15 91364859 91366989 -12127985 + MERVL_2A-int LTR ERVL 3411 5582 -179 5 1282 230 311 28 37 chr15 91366989 91367096 -12127878 + ORR1D2-int LTR MaLR 519 624 -1339 5 1282 249 246 0 42 chr15 91367106 91367178 -12127796 + ORR1D2-int LTR MaLR 569 637 -1326 5 1282 1724 191 134 63 chr15 91367242 91367718 -12127256 + MT2A LTR ERVL 2 511 -22 5 1282 1118 271 17 3 chr15 91367752 91368045 -12126929 + ORR1D2 LTR MaLR 72 368 -2 5 1282 300 206 152 0 chr15 91368047 91368139 -12126835 - L1M2 LINE L1 -1944 4199 4094 5 1282 380 181 205 8 chr15 91368162 91368279 -12126695 + B1F2 SINE Alu 3 142 -7 5 1282 222 62 0 0 chr15 91368288 91368320 -12126654 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 5 1282 180 230 43 75 chr15 91368341 91368435 -12126539 + L3 LINE CR1 3528 3618 -871 5 1282 549 0 0 0 chr15 91369612 91369673 -12125301 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 1282 252 342 41 0 chr15 91369732 91369805 -12125169 + ID4_ SINE ID 2 77 -6 5 1282 805 258 26 5 chr15 91369930 91370125 -12124849 + B3 SINE B2 1 199 -17 5 1282 376 305 76 0 chr15 91370771 91370902 -12124072 + B1F2 SINE Alu 4 144 -5 5 1282 254 87 22 0 chr15 91371454 91371500 -12123474 + (TTTTG)n Simple_repeat Simple_repeat 1 47 0 5 1282 1198 42 7 0 chr15 91371500 91371642 -12123332 - B1_Mm SINE Alu 0 147 5 5 1282 1008 262 27 24 chr15 91372603 91372935 -12122039 + L1_Mur3 LINE L1 3705 4037 -1843 5 1282 542 218 25 1 chr15 91372936 91373101 -12121873 + L1M4 LINE L1 5269 5442 -722 5 1282 369 267 166 31 chr15 91373262 91373455 -12121519 + Lx8 LINE L1 5636 5854 -1619 5 1282 635 252 154 13 chr15 91373514 91373747 -12121227 + ORR1D2 LTR MaLR 1 266 -104 5 1282 694 279 43 5 chr15 91373831 91374015 -12120959 + B3 SINE B2 1 191 -25 5 1282 504 0 0 0 chr15 91374101 91374157 -12120817 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 1282 288 329 0 12 chr15 91374191 91374271 -12120703 + Lx8 LINE L1 6214 6292 -1181 5 1282 640 239 437 76 chr15 91374318 91374580 -12120394 + Lx8 LINE L1 6381 6737 -736 5 1282 1150 221 178 3 chr15 91374588 91374942 -12120032 + MTD LTR MaLR 2 417 -2 5 1282 458 371 19 15 chr15 91375013 91375276 -12119698 + Lx8 LINE L1 7068 7331 -142 5 1282 291 250 28 0 chr15 91376087 91376159 -12118815 + URR1B DNA MER1_type 1 74 -151 5 1282 1873 285 52 14 chr15 91376159 91376828 -12118146 - ERVL-B4-int LTR ERVL -82 5632 4938 5 1282 345 210 74 0 chr15 91376850 91376931 -12118043 + ID_B1 SINE B4 136 222 -2 5 1282 477 0 0 0 chr15 91377061 91377114 -12117860 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 1282 316 235 108 24 chr15 91377351 91377434 -12117540 - B3 SINE B2 -121 95 6 5 1282 21 0 0 0 chr15 91379397 91379418 -12115556 + AT_rich Low_complexity Low_complexity 1 21 0 5 1282 390 277 21 49 chr15 91379435 91379579 -12115395 + B1F SINE Alu 3 142 -7 5 1282 479 241 26 9 chr15 91379792 91379905 -12115069 - RSINE1 SINE B4 -20 145 31 5 1282 803 315 36 4 chr15 91380414 91380691 -12114283 + B4A SINE B4 1 286 -6 5 1282 378 0 0 0 chr15 91380711 91380753 -12114221 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1282 768 336 91 21 chr15 91381127 91381699 -12113275 - Lx8 LINE L1 -9 7464 6853 5 1282 266 284 0 0 chr15 91382787 91382854 -12112120 + B1F SINE Alu 25 91 -58 5 1282 420 242 48 40 chr15 91383090 91383215 -12111759 - B1F2 SINE Alu -18 131 6 5 1282 232 260 92 20 chr15 91383703 91383718 -12111256 - ID_B1 SINE B4 -31 193 89 5 1282 270 220 65 14 chr15 91383718 91383801 -12111173 - PB1D10 SINE Alu -51 98 8 5 1282 207 0 0 0 chr15 91383972 91383995 -12110979 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5 1282 430 248 65 65 chr15 91383995 91384133 -12110841 - B1F SINE Alu -11 138 1 5 1282 307 280 82 46 chr15 91384403 91384582 -12110392 - L1MA6 LINE L1 0 6300 6118 5 1282 22 0 0 0 chr15 91384623 91384645 -12110329 + AT_rich Low_complexity Low_complexity 1 22 0 5 1282 242 333 76 25 chr15 91384774 91384931 -12110043 + ORR1E LTR MaLR 32 196 -163 5 1282 236 307 59 94 chr15 91385307 91385562 -12109412 + ORR1E LTR MaLR 101 346 -13 5 1282 594 318 67 22 chr15 91386053 91386320 -12108654 + B4A SINE B4 4 282 -10 5 1282 214 259 19 0 chr15 91386337 91386391 -12108583 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1282 231 258 98 100 chr15 91386520 91386832 -12108142 - B4A SINE B4 -16 276 4 5 1282 441 0 0 0 chr15 91386840 91386889 -12108085 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1282 438 177 10 40 chr15 91390114 91390214 -12104760 - 5S rRNA rRNA -24 97 1 5 1282 1155 223 74 40 chr15 91390579 91390972 -12104002 + RLTR11A LTR ERVK 35 483 -45 5 1282 431 287 0 57 chr15 91391430 91391588 -12103386 - B4 SINE B4 -15 277 129 5 1282 2033 82 53 0 chr15 91391588 91391891 -12103083 + ORR1A2 LTR MaLR 1 319 -8 5 1282 310 296 60 60 chr15 91392140 91392374 -12102600 - MIR SINE MIR -3 259 26 5 1282 3934 187 53 145 chr15 91393350 91394458 -12100516 - RMER1B Other Other -1 1065 60 5 1282 427 246 121 91 chr15 91394565 91394840 -12100134 + L1MB2 LINE L1 4874 5167 -973 5 1282 584 267 0 53 chr15 91394840 91395046 -12099928 + B3A SINE B2 3 197 -1 5 1282 427 246 121 91 chr15 91395046 91395200 -12099774 + L1MB2 LINE L1 5168 5316 -824 5 1282 396 299 0 0 chr15 91395207 91395324 -12099650 + ID_B1 SINE B4 108 224 0 5 1282 544 297 139 42 chr15 91395325 91395873 -12099101 + L1MB2 LINE L1 5304 5904 -267 5 1282 384 292 48 14 chr15 91395922 91396068 -12098906 + L1MB2 LINE L1 6021 6171 0 5 1282 990 237 0 19 chr15 91396078 91396289 -12098685 + B3 SINE B2 1 207 -9 5 1282 21 0 0 0 chr15 91396296 91396317 -12098657 + AT_rich Low_complexity Low_complexity 1 21 0 5 1282 728 274 62 24 chr15 91396449 91396789 -12098185 + ORR1E LTR MaLR 4 356 -3 5 1282 536 232 22 45 chr15 91398478 91398676 -12096298 - B3A SINE B2 -4 191 2 5 1282 22 35 0 0 chr15 91398684 91398713 -12096261 + AT_rich Low_complexity Low_complexity 1 29 0 5 1282 228 37 0 0 chr15 91399453 91399480 -12095494 - L1_Mm LINE L1 -1059 4824 4798 5 1282 404 222 100 45 chr15 91399842 91399980 -12094994 - B3A SINE B2 -47 146 1 5 1282 194 362 27 60 chr15 91400064 91400214 -12094760 + L2c LINE L2 3243 3387 0 5 1282 1005 126 189 5 chr15 91401187 91401378 -12093596 + URR1A DNA MER1_type 1 226 0 5 1282 243 0 0 0 chr15 91402255 91402282 -12092692 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1282 313 99 42 0 chr15 91404170 91404241 -12090733 + (CAGA)n Simple_repeat Simple_repeat 2 75 0 5 1282 234 338 65 0 chr15 91405870 91405947 -12089027 + ID4_ SINE ID 2 83 0 5 1282 27 0 0 0 chr15 91406057 91406084 -12088890 + AT_rich Low_complexity Low_complexity 1 27 0 5 1282 1124 212 161 16 chr15 91406098 91406233 -12088741 + ORR1D1 LTR MaLR 1 135 -239 5 1282 306 0 0 0 chr15 91406233 91406267 -12088707 + (TC)n Simple_repeat Simple_repeat 2 35 0 6 1282 351 0 0 0 chr15 91406267 91406305 -12088669 + (TA)n Simple_repeat Simple_repeat 2 40 0 6 1282 1124 212 161 16 chr15 91406305 91406484 -12088490 + ORR1D1 LTR MaLR 136 360 -14 5 1282 323 213 30 0 chr15 91406751 91406842 -12088132 + ORR1D1 LTR MaLR 11 107 -252 6 1282 616 348 44 44 chr15 91406862 91406975 -12087999 + Lx8 LINE L1 7041 7154 -319 6 1282 1153 233 148 21 chr15 91406975 91407135 -12087839 + ORR1C2 LTR MaLR 5 170 -214 6 1282 259 25 50 0 chr15 91407135 91407175 -12087799 + (TCTG)n Simple_repeat Simple_repeat 4 45 0 6 1282 1153 233 148 21 chr15 91407175 91407351 -12087623 + ORR1C2 LTR MaLR 171 383 -1 6 1282 616 348 44 44 chr15 91407351 91407508 -12087466 + Lx8 LINE L1 7155 7311 -162 6 1282 444 51 0 0 chr15 91407712 91407771 -12087203 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1282 189 74 0 0 chr15 91408373 91408400 -12086574 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1282 1112 79 44 0 chr15 91408685 91408914 -12086060 + (TCTA)n Simple_repeat Simple_repeat 1 238 0 6 1282 1160 41 47 0 chr15 91408935 91409106 -12085868 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 6 1282 1772 148 87 23 chr15 91409117 91409462 -12085512 - MTC LTR MaLR 0 421 55 6 1282 1910 131 13 0 chr15 91409464 91409778 -12085196 + RMER6A LTR ERVK 3 320 -436 6 1282 4075 66 0 0 chr15 91409778 91410326 -12084648 - L1_Mm LINE L1 -3972 1911 1364 6 1282 3777 46 7 11 chr15 91410327 91410788 -12084186 + L1_Mus1 LINE L1 6108 6566 -1 6 1282 729 169 89 11 chr15 91410877 91411056 -12083918 + RMER6A LTR ERVK 309 501 -255 6 1282 294 164 0 0 chr15 91411079 91411134 -12083840 + GA-rich Low_complexity Low_complexity 1 55 0 6 1282 1317 168 26 8 chr15 91411134 91411398 -12083576 + RMER6A LTR ERVK 488 756 0 6 1282 337 148 0 32 chr15 91411398 91411460 -12083514 - MTC LTR MaLR -361 60 1 6 1282 243 0 0 0 chr15 91411489 91411516 -12083458 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1282 266 279 12 12 chr15 91411596 91411676 -12083298 - 7SK RNA RNA -224 107 28 6 1282 285 341 0 0 chr15 91411711 91411799 -12083175 - PB1D10 SINE Alu -7 110 23 6 1282 428 282 123 34 chr15 91411860 91412186 -12082788 + L1M5 LINE L1 2802 3156 -2990 6 1282 482 300 35 64 chr15 91412458 91412661 -12082313 + B3A SINE B2 2 198 0 6 1282 269 250 167 20 chr15 91412768 91412870 -12082104 - PB1D10 SINE Alu 0 117 1 6 1282 1222 171 75 4 chr15 91413018 91413258 -12081716 - MTC LTR MaLR 0 421 165 6 1282 245 242 0 0 chr15 91413422 91413484 -12081490 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 1282 457 188 60 0 chr15 91414234 91414367 -12080607 + Lx9 LINE L1 7502 7642 -2 6 1282 23 33 0 0 chr15 91414381 91414411 -12080563 + AT_rich Low_complexity Low_complexity 1 30 0 6 1282 316 283 0 42 chr15 91415706 91415802 -12079172 - PB1D10 SINE Alu -7 110 19 6 1282 1280 209 54 49 chr15 91417848 91418216 -12076758 - ORR1D1 LTR MaLR -4 370 1 6 1282 1989 231 60 28 chr15 91419244 91419877 -12075097 + RCHARR1 DNA MER1_type 321 973 -1 6 1282 234 290 10 10 chr15 91419929 91420030 -12074944 - L1MC5 LINE L1 -465 7496 7396 6 1282 477 0 0 0 chr15 91420057 91420110 -12074864 + (TC)n Simple_repeat Simple_repeat 2 54 0 6 1282 210 205 36 0 chr15 91420111 91420194 -12074780 + (TA)n Simple_repeat Simple_repeat 1 86 0 6 1282 480 77 0 0 chr15 91420398 91420463 -12074511 + (TA)n Simple_repeat Simple_repeat 1 65 0 6 1282 1017 149 2 255 chr15 91421035 91421529 -12073445 - RMER17C LTR ERVK -41 369 1 6 1282 327 329 41 55 chr15 91423666 91423885 -12071089 + ORR1E LTR MaLR 1 216 -143 6 1282 463 271 100 17 chr15 91424069 91424249 -12070725 - RMER20B LTR ERVK -292 335 141 6 1282 226 76 29 57 chr15 91424546 91424616 -12070358 + T-rich Low_complexity Low_complexity 3 70 0 6 1282 262 202 54 71 chr15 91424819 91424931 -12070043 - RMER2 LTR ERV1 0 567 458 6 1282 585 164 0 96 chr15 91424951 91425086 -12069888 - RMER2 LTR ERV1 -233 334 213 6 1282 445 209 0 0 chr15 91425107 91425193 -12069781 - RMER2 LTR ERV1 -481 86 1 6 1282 1138 113 16 11 chr15 91425557 91425745 -12069229 - B2_Mm2 SINE B2 0 195 7 6 1282 485 327 19 37 chr15 91426669 91426831 -12068143 + RSINE1 SINE B4 6 164 -1 6 1282 905 122 7 0 chr15 91427003 91427150 -12067824 + (TTC)n Simple_repeat Simple_repeat 2 149 0 6 1282 402 21 0 0 chr15 91427151 91427198 -12067776 + (TTTTG)n Simple_repeat Simple_repeat 4 50 0 6 1282 1089 45 30 0 chr15 91427198 91427330 -12067644 - B1_Mus1 SINE Alu -12 136 1 6 1282 699 12 0 0 chr15 91427352 91427432 -12067542 + (TTC)n Simple_repeat Simple_repeat 2 81 0 6 1282 1120 228 83 39 chr15 91427866 91428247 -12066727 + RLTR16 LTR ERVK 17 400 -105 6 1282 538 58 23 0 chr15 91428247 91428334 -12066640 + (TG)n Simple_repeat Simple_repeat 2 90 0 6 1282 461 266 89 37 chr15 91428334 91428365 -12066609 + RLTR16 LTR ERVK 465 510 -58 6 1282 266 119 0 0 chr15 91428344 91428386 -12066588 + RLTR16 LTR ERVK 464 505 0 6 1282 254 342 45 19 chr15 91428406 91428561 -12066413 + Charlie1a DNA MER1_type 212 370 -1085 6 1282 1034 120 22 17 chr15 91428646 91428824 -12066150 - URR1A DNA MER1_type 0 226 48 6 1282 296 242 0 0 chr15 91428873 91428935 -12066039 + ID4 SINE ID 11 72 -11 6 1282 522 283 202 6 chr15 91428959 91429416 -12065558 + Charlie1a DNA MER1_type 556 1102 -353 6 1282 511 264 22 149 chr15 91429481 91429703 -12065271 + MTE2a LTR MaLR 14 207 -172 6 1282 3035 38 0 53 chr15 91432045 91432438 -12062536 + L1Md_T LINE L1 6211 6582 0 6 1282 1529 178 78 0 chr15 91432584 91432905 -12062069 - RMER1C Other Other 0 1342 997 6 1282 704 162 116 61 chr15 91433234 91433398 -12061576 - RMER1C Other Other -303 1039 867 6 1282 405 0 0 0 chr15 91433935 91433980 -12060994 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 1282 4448 204 54 28 chr15 91434121 91435098 -12059876 + Lx7 LINE L1 6694 7696 0 6 1282 573 285 164 16 chr15 91435249 91435541 -12059433 + MTD LTR MaLR 1 360 -59 6 1282 392 273 28 28 chr15 91435698 91435805 -12059169 - PB1D10 SINE Alu -5 112 9 6 1282 378 0 0 0 chr15 91435861 91435903 -12059071 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1282 1064 231 64 37 chr15 91436602 91436899 -12058075 - Lx7 LINE L1 -437 7259 6955 6 1282 347 257 158 0 chr15 91437171 91437272 -12057702 + PB1D10 SINE Alu 1 117 0 6 1282 341 282 74 105 chr15 91437825 91437859 -12057115 + L1MD3 LINE L1 6662 6696 -1089 6 1282 596 204 256 22 chr15 91437859 91438039 -12056935 - URR1A DNA MER1_type 0 226 5 6 1282 344 282 74 105 chr15 91438039 91438424 -12056550 + L1MD3 LINE L1 6697 7067 -718 6 1282 355 228 168 0 chr15 91438459 91438560 -12056414 - B1F SINE Alu -29 120 3 6 1282 803 303 98 32 chr15 91438565 91439224 -12055750 + L1MD3 LINE L1 7059 7964 -31 6 1282 413 297 69 37 chr15 91440472 91440717 -12054257 - L1MB3 LINE L1 -5 6178 5926 6 1282 216 0 0 0 chr15 91441253 91441277 -12053697 + (CACG)n Simple_repeat Simple_repeat 4 27 0 6 1282 650 275 75 86 chr15 91441672 91442125 -12052849 - Lx9 LINE L1 0 7644 7197 6 1282 1736 53 0 0 chr15 91442130 91442357 -12052617 - MTB_Mm LTR MaLR 0 407 181 6 1282 22 56 0 0 chr15 91442363 91442399 -12052575 + AT_rich Low_complexity Low_complexity 1 36 0 6 1282 425 285 90 0 chr15 91442399 91442543 -12052431 - RSINE1 SINE B4 -6 159 3 6 1282 1446 50 5 15 chr15 91443270 91443474 -12051500 - MTB_Mm LTR MaLR -203 204 3 6 1282 329 267 104 85 chr15 91443477 91443641 -12051333 - Lx9 LINE L1 -447 7197 7031 6 1282 229 267 0 16 chr15 91443645 91443706 -12051268 + L1_Mur1 LINE L1 4183 4242 -1644 6 1282 2964 81 15 2 chr15 91445437 91445832 -12049142 - MTB LTR MaLR 0 400 1 6 1282 354 23 0 0 chr15 91445959 91446002 -12048972 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1282 662 51 20 0 chr15 91447205 91447303 -12047671 + (TCTCTG)n Simple_repeat Simple_repeat 3 102 0 6 1282 207 0 0 0 chr15 91447303 91447325 -12047649 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 1282 663 284 33 45 chr15 91447625 91447868 -12047106 - 7SK RNA RNA -91 240 1 6 1282 369 62 0 0 chr15 91448077 91448125 -12046849 + (T)n Simple_repeat Simple_repeat 1 48 0 6 1282 660 87 0 0 chr15 91448591 91448683 -12046291 + (GA)n Simple_repeat Simple_repeat 1 92 0 6 1282 400 269 46 0 chr15 91448684 91448792 -12046182 + B1F1 SINE Alu 7 119 -1 6 1282 21 0 0 0 chr15 91448849 91448870 -12046104 + AT_rich Low_complexity Low_complexity 1 21 0 6 1282 744 100 9 0 chr15 91449305 91449415 -12045559 - B1_Mus1 SINE Alu -37 111 1 6 1282 958 278 143 23 chr15 91449476 91450243 -12044731 - L1M2 LINE L1 -283 5564 4690 6 1282 271 267 0 0 chr15 91450243 91450303 -12044671 - B2_Mm2 SINE B2 -135 60 1 6 1282 323 278 11 0 chr15 91450303 91450405 -12044569 - L1M2 LINE L1 -1567 4576 4443 6 1282 297 0 0 0 chr15 91450456 91450489 -12044485 + (GA)n Simple_repeat Simple_repeat 2 34 0 6 1282 226 235 71 63 chr15 91450489 91450616 -12044358 + L1_Mur3 LINE L1 4149 4276 -1604 6 1282 268 193 44 0 chr15 91450637 91450751 -12044223 + (TA)n Simple_repeat Simple_repeat 2 120 0 6 1282 864 196 0 0 chr15 91450750 91450929 -12044045 + (TG)n Simple_repeat Simple_repeat 2 180 0 6 1282 195 129 0 0 chr15 91450941 91450972 -12044002 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1282 936 281 112 41 chr15 91451085 91451219 -12043755 - L1M2 LINE L1 -1595 4285 4149 6 1282 441 0 0 0 chr15 91451219 91451268 -12043706 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 1282 936 281 112 41 chr15 91451268 91451648 -12043326 - L1M2 LINE L1 -1732 4148 3730 6 1282 2733 105 17 12 chr15 91451648 91452053 -12042921 - MTB_Mm LTR MaLR 0 407 1 6 1282 936 281 112 41 chr15 91452053 91452097 -12042877 - L1M2 LINE L1 -2151 3729 3689 6 1282 621 40 0 0 chr15 91452098 91452174 -12042800 + (TTCC)n Simple_repeat Simple_repeat 4 79 0 6 1282 459 0 0 0 chr15 91452174 91452225 -12042749 + (TC)n Simple_repeat Simple_repeat 1 51 0 6 1282 378 278 36 33 chr15 91452225 91452465 -12042509 - L1M2 LINE L1 -2630 3513 3246 6 1282 592 295 0 0 chr15 91452716 91452845 -12042129 + RSINE1 SINE B4 12 140 -25 6 1282 1089 283 70 54 chr15 91455302 91455567 -12039407 - L1M2 LINE L1 -693 5463 5211 6 1282 1067 161 106 39 chr15 91455567 91455774 -12039200 + URR1A DNA MER1_type 5 225 -1 6 1282 1089 301 140 44 chr15 91455774 91456473 -12038501 - L1M2 LINE L1 -933 5210 4404 6 1282 1045 251 12 26 chr15 91456473 91456788 -12038186 + L1_Mur3 LINE L1 5046 5326 -820 6 1282 1232 103 20 0 chr15 91456788 91456983 -12037991 - RLTR11B LTR ERVK -254 199 1 6 1282 1352 270 141 58 chr15 91456984 91457881 -12037093 + Lx7 LINE L1 6709 7679 -17 6 1282 296 299 62 0 chr15 91458147 91458244 -12036730 + MLT1F LTR MaLR 220 322 -226 6 1282 1202 178 105 23 chr15 91458804 91459109 -12035865 + RLTR15 LTR ERVK 6 335 -24 6 1282 341 212 11 56 chr15 91459136 91459226 -12035748 + B1F SINE Alu 64 149 0 6 1282 2781 235 127 58 chr15 91459379 91460306 -12034668 + RMER1A Other Other 37 1027 -3 6 1282 564 243 13 88 chr15 91460328 91460554 -12034420 - B3 SINE B2 -5 211 3 6 1282 1883 167 152 11 chr15 91460619 91461078 -12033896 + RLTR28 LTR ERVL 1 524 0 7 1282 2001 167 16 27 chr15 91461412 91461788 -12033186 + ORR1D1 LTR MaLR 1 372 -2 7 1282 248 296 94 29 chr15 91462494 91462667 -12032307 + L1MA6 LINE L1 5499 5681 -619 7 1282 520 258 92 7 chr15 91462672 91462824 -12032150 + B3A SINE B2 1 165 -33 7 1282 797 314 64 23 chr15 91462882 91463354 -12031620 + L1MA6 LINE L1 5662 6152 -148 7 1282 278 183 0 48 chr15 91463794 91463857 -12031117 - B1_Mur1 SINE Alu -1 148 89 7 1282 1266 158 11 44 chr15 91463862 91464134 -12030840 - BGLII LTR ERVK 0 421 159 7 1282 1635 87 0 12 chr15 91464118 91464374 -12030600 - BGLII LTR ERVK -168 253 1 7 1282 582 252 122 43 chr15 91464958 91465155 -12029819 + B4A SINE B4 4 217 -75 7 1282 249 33 0 0 chr15 91465155 91465185 -12029789 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 7 1282 582 252 122 43 chr15 91465185 91465240 -12029734 + B4A SINE B4 218 275 -17 7 1282 361 252 7 7 chr15 91465267 91465403 -12029571 + GA-rich Low_complexity Low_complexity 1 136 0 7 1282 641 174 57 14 chr15 91465673 91465813 -12029161 - B1_Mur3 SINE Alu -1 148 3 7 1282 391 319 143 25 chr15 91465824 91466104 -12028870 - MLT1C LTR MaLR -46 421 109 7 1282 486 0 0 0 chr15 91466893 91466947 -12028027 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1282 215 328 0 0 chr15 91467383 91467450 -12027524 + (TTG)n Simple_repeat Simple_repeat 2 68 0 7 1282 491 291 0 45 chr15 91467456 91467589 -12027385 - ID_B1 SINE B4 -3 221 95 7 1282 282 281 11 33 chr15 91468121 91468213 -12026761 + MER57A-int LTR ERV1 5806 5895 -292 7 1282 321 26 0 0 chr15 91468474 91468512 -12026462 + (CAA)n Simple_repeat Simple_repeat 1 38 0 7 1282 1248 220 92 113 chr15 91468526 91469038 -12025936 + RLTR11A LTR ERVK 1 501 -27 7 1282 469 299 19 58 chr15 91469522 91469742 -12025232 - B3A SINE B2 -5 211 1 7 1282 32 0 0 0 chr15 91470388 91470420 -12024554 + AT_rich Low_complexity Low_complexity 1 32 0 7 1282 873 273 5 0 chr15 91470420 91470625 -12024349 + B3 SINE B2 1 206 -10 7 1282 366 80 0 0 chr15 91470703 91470753 -12024221 + (TATG)n Simple_repeat Simple_repeat 1 50 0 7 1282 717 168 17 6 chr15 91470754 91470928 -12024046 + (TCTA)n Simple_repeat Simple_repeat 2 177 0 7 1282 258 32 0 0 chr15 91470935 91470966 -12024008 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 7 1282 673 163 130 0 chr15 91470972 91471095 -12023879 - B1_Mus2 SINE Alu -8 139 1 7 1282 676 201 14 3 chr15 91471406 91471701 -12023273 + (TG)n Simple_repeat Simple_repeat 1 298 0 7 1282 658 106 18 9 chr15 91471818 91471831 -12023143 + (TTCC)n Simple_repeat Simple_repeat 1 13 0 7 1282 771 11 0 0 chr15 91471831 91471919 -12023055 + (TTCCC)n Simple_repeat Simple_repeat 2 89 0 7 1282 658 106 18 9 chr15 91471919 91472019 -12022955 + (TTCC)n Simple_repeat Simple_repeat 3 104 0 7 1282 308 228 0 9 chr15 91472871 91472986 -12021988 + (TG)n Simple_repeat Simple_repeat 2 115 0 7 1282 279 180 0 90 chr15 91473247 91473314 -12021660 - ID4 SINE ID 0 83 23 7 1282 415 277 123 0 chr15 91474631 91474786 -12020188 + MTEa LTR MaLR 206 379 0 7 1282 2104 199 116 43 chr15 91474894 91475430 -12019544 + RMER15 LTR ERVL 1 575 0 7 1282 306 272 0 61 chr15 91476168 91476266 -12018708 - PB1D10 SINE Alu -2 115 24 7 1282 29 28 0 0 chr15 91477049 91477085 -12017889 + AT_rich Low_complexity Low_complexity 1 36 0 7 1282 496 270 56 0 chr15 91477085 91477096 -12017878 - RSINE1 SINE B4 -7 158 148 7 1282 675 90 0 0 chr15 91477096 91477196 -12017778 + (TG)n Simple_repeat Simple_repeat 2 101 0 7 1282 496 270 56 0 chr15 91477196 91477310 -12017664 - RSINE1 SINE B4 -18 147 27 7 1282 307 39 58 0 chr15 91477975 91478027 -12016947 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 7 1282 1074 80 0 0 chr15 91478027 91478165 -12016809 - B1_Mus1 SINE Alu -10 138 1 7 1282 381 22 0 0 chr15 91478191 91478237 -12016737 + (TC)n Simple_repeat Simple_repeat 1 46 0 7 1282 411 98 0 0 chr15 91478237 91478298 -12016676 + (TCCA)n Simple_repeat Simple_repeat 4 64 0 7 1282 337 138 230 35 chr15 91478298 91478411 -12016563 + Lx9 LINE L1 7509 7643 -1 7 1282 258 248 7 55 chr15 91478407 91478552 -12016422 + L1_Rod LINE L1 1325 1462 -4385 7 1282 273 255 0 0 chr15 91478571 91478669 -12016305 + (CA)n Simple_repeat Simple_repeat 2 99 0 7 1282 255 73 0 47 chr15 91478669 91478712 -12016262 + L1_Rod LINE L1 1455 1495 -4352 7 1282 584 273 43 100 chr15 91478714 91479015 -12015959 + L1_Mur3 LINE L1 547 830 -6898 7 1282 2219 211 153 9 chr15 91479341 91480264 -12014710 + L1_Mur3 LINE L1 830 1885 -3995 7 1282 606 198 8 23 chr15 91480259 91480388 -12014586 + Lx9 LINE L1 7355 7481 -163 7 1282 3552 144 80 108 chr15 91480388 91481255 -12013719 + RMER21B LTR ERV1 1 842 0 7 1282 242 220 42 8 chr15 91481283 91481402 -12013572 + (CATATA)n Simple_repeat Simple_repeat 4 126 0 7 1282 582 63 0 0 chr15 91481405 91481484 -12013490 + (GA)n Simple_repeat Simple_repeat 2 80 0 7 1282 738 136 0 0 chr15 91482394 91482549 -12012425 + (CA)n Simple_repeat Simple_repeat 2 156 0 7 1282 1045 168 25 5 chr15 91482698 91482895 -12012079 + URR1A DNA MER1_type 1 201 -25 7 1282 1311 85 32 5 chr15 91482897 91483086 -12011888 + B2_Mm2 SINE B2 2 195 0 7 1282 1032 251 89 36 chr15 91483537 91483665 -12011309 + MTD LTR MaLR 41 181 -238 7 1282 2890 52 0 42 chr15 91483665 91484046 -12010928 + RLTR10B2 LTR ERVK 1 365 0 7 1282 1032 251 89 36 chr15 91484046 91484277 -12010697 + MTD LTR MaLR 182 419 0 7 1282 226 295 62 21 chr15 91484283 91484380 -12010594 - L1MB8 LINE L1 -42 6136 6036 7 1282 395 193 179 32 chr15 91484567 91484690 -12010284 - MTD LTR MaLR -278 141 1 7 1282 852 200 26 58 chr15 91485564 91485755 -12009219 + MTD LTR MaLR 201 385 -34 7 1282 2257 252 119 7 chr15 91485755 91485785 -12009189 + Lx8 LINE L1 6146 6177 -1296 7 1282 3378 35 15 0 chr15 91485785 91486179 -12008795 + MTB LTR MaLR 1 400 0 7 1282 2257 252 119 7 chr15 91486179 91486827 -12008147 + Lx8 LINE L1 6178 6899 -574 7 1282 522 280 7 43 chr15 91486883 91487021 -12007953 + Lx8 LINE L1 7095 7227 -246 7 1282 390 42 0 0 chr15 91487021 91487069 -12007905 + (A)n Simple_repeat Simple_repeat 1 48 0 7 1282 1200 223 144 12 chr15 91487111 91487438 -12007536 - ORR1D1 LTR MaLR -2 372 3 7 1282 271 18 52 35 chr15 91487505 91487563 -12007411 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 7 1283 342 67 0 0 chr15 91488297 91488342 -12006632 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1283 318 316 106 11 chr15 91488392 91488571 -12006403 - MLT1A1 LTR MaLR -49 359 164 7 1283 246 353 12 0 chr15 91489114 91489199 -12005775 - PB1D10 SINE Alu -29 88 3 7 1283 220 224 155 0 chr15 91489356 91489414 -12005560 - ID2 SINE ID -4 79 13 7 1283 450 176 90 25 chr15 91489496 91489618 -12005356 - B1F SINE Alu -11 138 9 7 1283 450 0 0 0 chr15 91490096 91490146 -12004828 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 1283 216 306 0 65 chr15 91490170 91490247 -12004727 - B1F1 SINE Alu -55 94 23 7 1283 1169 174 56 0 chr15 91491769 91491982 -12002992 - URR1B DNA MER1_type 0 225 1 7 1283 441 224 106 50 chr15 91492352 91492493 -12002481 + MLT1A1 LTR MaLR 189 337 -71 7 1283 495 323 10 24 chr15 91492724 91492930 -12002044 + MT2A LTR ERVL 287 489 -44 7 1283 220 143 18 18 chr15 91492946 91493003 -12001971 + (TA)n Simple_repeat Simple_repeat 1 57 0 7 1283 3672 45 0 5 chr15 91493207 91493649 -12001325 + L1Md_T LINE L1 6123 6562 -20 7 1283 625 215 39 0 chr15 91494007 91494137 -12000837 - B1_Mur2 SINE Alu -6 143 9 7 1283 237 278 76 22 chr15 91494336 91494428 -12000546 - MamRep605 Unknown Unknown -601 275 179 7 1283 982 233 19 0 chr15 91494432 91494638 -12000336 + B3 SINE B2 5 214 -2 7 1283 502 71 24 0 chr15 91495278 91495362 -11999612 + (CA)n Simple_repeat Simple_repeat 2 87 0 7 1283 360 0 0 0 chr15 91496369 91496409 -11998565 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1283 315 0 0 0 chr15 91497117 91497152 -11997822 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1283 226 339 0 0 chr15 91497155 91497214 -11997760 - B3A SINE B2 -38 160 102 7 1283 433 126 50 2 chr15 91497197 91497284 -11997690 + MTC LTR MaLR 270 421 0 7 1283 211 269 39 0 chr15 91497292 91497344 -11997630 - B1F2 SINE Alu -95 54 1 7 1283 324 64 0 0 chr15 91497386 91497433 -11997541 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1283 1344 255 65 15 chr15 91497452 91497850 -11997124 - MTD LTR MaLR -1 418 1 7 1283 21 0 0 0 chr15 91497864 91497885 -11997089 + AT_rich Low_complexity Low_complexity 1 21 0 7 1283 4118 226 52 25 chr15 91497921 91499998 -11994976 + Lx9 LINE L1 4781 7130 -514 7 1283 967 199 112 142 chr15 91500000 91500266 -11994708 + Lx9 LINE L1 7136 7422 -222 1 1283 1272 48 0 0 chr15 91500266 91500411 -11994563 + B1_Mus1 SINE Alu 3 147 -1 2 1283 967 199 112 142 chr15 91500411 91500502 -11994472 + Lx9 LINE L1 7423 7482 -162 1 1283 189 0 0 0 chr15 91500549 91500570 -11994404 + (TC)n Simple_repeat Simple_repeat 2 22 0 3 1283 333 0 0 0 chr15 91500570 91500606 -11994368 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 1283 432 0 0 0 chr15 91502004 91502052 -11992922 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1283 320 200 39 32 chr15 91502820 91502975 -11991999 + CT-rich Low_complexity Low_complexity 1 156 0 6 1283 452 219 51 26 chr15 91502979 91503096 -11991878 - ID_B1 SINE B4 -1 223 104 7 1283 468 0 0 0 chr15 91504896 91504948 -11990026 + (TC)n Simple_repeat Simple_repeat 1 52 0 8 1283 256 48 23 23 chr15 91504948 91504991 -11989983 + (TCC)n Simple_repeat Simple_repeat 1 43 0 9 1283 401 320 10 0 chr15 91505008 91505108 -11989866 - PB1D10 SINE Alu -16 101 1 1 1283 212 260 13 27 chr15 91505522 91505597 -11989377 + CT-rich Low_complexity Low_complexity 2 75 0 1 1283 306 194 0 0 chr15 91505759 91505826 -11989148 + CT-rich Low_complexity Low_complexity 1 67 0 1 1283 323 247 82 0 chr15 91505832 91505905 -11989069 - ID4_ SINE ID -2 81 3 1 1283 2865 61 0 3 chr15 91506127 91506471 -11988503 - L1_Mus1 LINE L1 0 6567 6225 1 1283 288 0 0 0 chr15 91507416 91507448 -11987526 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1283 746 301 14 56 chr15 91508425 91508542 -11986432 + B3 SINE B2 1 114 -102 1 1283 1500 238 89 8 chr15 91508542 91508924 -11986050 + MTD LTR MaLR 3 415 -4 1 1283 746 301 14 56 chr15 91508924 91509021 -11985953 + B3 SINE B2 115 206 -10 1 1283 183 42 0 0 chr15 91509028 91509052 -11985922 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1283 446 0 19 0 chr15 91509536 91509590 -11985384 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1283 1213 90 0 0 chr15 91509775 91509920 -11985054 + B1_Mm SINE Alu 1 145 -2 2 1283 213 39 0 0 chr15 91509920 91509946 -11985028 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2 1283 600 292 55 37 chr15 91509962 91510179 -11984795 + ID_B1 SINE B4 2 222 -2 2 1283 224 338 14 14 chr15 91512658 91512730 -11982244 - ID4 SINE ID 0 83 12 2 1283 378 202 25 0 chr15 91512909 91512988 -11981986 - ID4 SINE ID 0 83 3 2 1283 568 288 15 0 chr15 91513144 91513276 -11981698 + B1_Mur1 SINE Alu 8 141 -8 2 1283 419 285 122 8 chr15 91513337 91513468 -11981506 - RSINE1 SINE B4 -9 156 11 2 1283 245 284 135 49 chr15 91514526 91514689 -11980285 + MER3 DNA MER1_type 9 185 -24 2 1283 300 238 78 84 chr15 91514864 91515006 -11979968 - B1F1 SINE Alu -8 141 1 2 1283 280 254 90 110 chr15 91515009 91515164 -11979810 + MIR SINE MIR 44 195 -67 2 1283 268 361 0 0 chr15 91515232 91515304 -11979670 + ID4 SINE ID 1 72 -11 3 1283 378 0 0 0 chr15 91515304 91515346 -11979628 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1283 969 112 0 0 chr15 91516896 91517201 -11977773 + (GA)n Simple_repeat Simple_repeat 1 305 0 3 1283 23 0 0 0 chr15 91517593 91517616 -11977358 + AT_rich Low_complexity Low_complexity 1 23 0 3 1283 1081 241 76 8 chr15 91518008 91518271 -11976703 + Lx5 LINE L1 6734 7014 -36 3 1283 367 299 128 17 chr15 91518279 91518459 -11976515 + B3 SINE B2 1 200 -16 3 1283 354 151 0 0 chr15 91518459 91518532 -11976442 + (TA)n Simple_repeat Simple_repeat 2 74 0 3 1283 1266 54 0 0 chr15 91518884 91519031 -11975943 + B1_Mm SINE Alu 1 147 0 3 1283 186 43 0 0 chr15 91519031 91519054 -11975920 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1283 222 229 21 0 chr15 91519847 91519895 -11975079 + PB1 SINE Alu 1 49 -78 3 1283 23 0 0 0 chr15 91519925 91519948 -11975026 + AT_rich Low_complexity Low_complexity 1 23 0 4 1283 361 261 0 11 chr15 91520110 91520292 -11974682 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1283 412 358 0 6 chr15 91520312 91520492 -11974482 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 1283 222 169 61 15 chr15 91520907 91520973 -11974001 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 4 1283 504 0 0 0 chr15 91521901 91521957 -11973017 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 1283 4692 249 20 44 chr15 91522070 91522560 -11972414 - Lx7 LINE L1 -284 7412 6923 4 1283 1812 165 232 3 chr15 91522560 91522901 -11972073 + MTC LTR MaLR 3 421 0 4 1283 5596 189 58 39 chr15 91522901 91523905 -11971069 + MTC-int LTR MaLR 1 1021 -237 4 1283 369 0 0 0 chr15 91523905 91523946 -11971028 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 4 1283 5596 189 58 39 chr15 91523946 91524175 -11970799 + MTC-int LTR MaLR 1022 1258 0 4 1283 1983 219 73 8 chr15 91524175 91524570 -11970404 + MTC LTR MaLR 1 421 0 4 1283 4692 249 20 44 chr15 91524570 91525263 -11969711 - Lx7 LINE L1 -774 6922 6257 4 1283 5070 201 73 14 chr15 91525276 91526456 -11968518 - Lx7 LINE L1 -138 5742 4494 4 1283 321 366 53 38 chr15 91527392 91527710 -11967264 - L1M5 LINE L1 -1333 4813 4491 4 1283 344 320 8 16 chr15 91527946 91528100 -11966874 - L1M5 LINE L1 -1986 4160 4008 4 1283 223 143 20 20 chr15 91529148 91529198 -11965776 + T-rich Low_complexity Low_complexity 6 55 0 4 1283 387 307 73 41 chr15 91529499 91529815 -11965159 + L1MA6 LINE L1 5972 6297 -3 4 1283 424 360 65 18 chr15 91532118 91532347 -11962627 + Tigger7 DNA MER2_type 13 252 -2239 5 1283 22 35 0 0 chr15 91533014 91533043 -11961931 + AT_rich Low_complexity Low_complexity 1 29 0 5 1283 216 0 0 0 chr15 91534243 91534267 -11960707 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1283 337 244 60 12 chr15 91534310 91534393 -11960581 + PB1D10 SINE Alu 1 87 -30 5 1283 210 304 0 0 chr15 91534401 91534457 -11960517 + GA-rich Low_complexity Low_complexity 5 60 0 5 1283 494 197 0 8 chr15 91535694 91535822 -11959152 + (CATATA)n Simple_repeat Simple_repeat 3 129 0 5 1283 1148 191 52 0 chr15 91536619 91536850 -11958124 - RMER15 LTR ERVL -62 513 271 5 1283 249 108 0 0 chr15 91537076 91537113 -11957861 + (CAA)n Simple_repeat Simple_repeat 2 38 0 5 1283 216 0 0 0 chr15 91537840 91537864 -11957110 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 1283 213 211 0 0 chr15 91537927 91537984 -11956990 + T-rich Low_complexity Low_complexity 1 57 0 5 1283 543 297 20 40 chr15 91537986 91538235 -11956739 - RMER15 LTR ERVL -310 265 22 5 1283 1091 131 34 43 chr15 91538788 91538996 -11955978 + Lx LINE L1 6448 6653 -1 6 1283 1230 55 0 20 chr15 91538997 91539145 -11955829 + B1_Mus2 SINE Alu 2 146 -1 6 1283 24 32 0 0 chr15 91539145 91539176 -11955798 + AT_rich Low_complexity Low_complexity 1 31 0 6 1283 207 302 97 22 chr15 91539288 91539397 -11955577 + MIRc SINE MIR 60 181 -87 6 1283 189 0 0 0 chr15 91541258 91541279 -11953695 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1283 466 228 0 0 chr15 91541970 91542062 -11952912 - PB1D9 SINE Alu -2 118 27 6 1283 361 299 23 80 chr15 91542227 91542424 -11952550 - B3A SINE B2 -4 191 2 6 1283 671 213 14 21 chr15 91544167 91544311 -11950663 + B1_Mur4 SINE Alu 7 149 -1 6 1283 429 20 0 0 chr15 91544359 91544409 -11950565 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1283 673 237 72 0 chr15 91545055 91545194 -11949780 + B1F SINE Alu 1 149 0 6 1283 303 346 58 0 chr15 91545230 91545386 -11949588 + L1MC LINE L1 5578 5742 -2140 7 1283 313 325 49 41 chr15 91545657 91545779 -11949195 + MLT1I LTR MaLR 281 403 -8 7 1283 22 0 0 0 chr15 91546375 91546397 -11948577 + AT_rich Low_complexity Low_complexity 1 22 0 7 1283 834 109 14 7 chr15 91546790 91546937 -11948037 + (TA)n Simple_repeat Simple_repeat 1 148 0 7 1283 316 325 44 31 chr15 91547200 91547359 -11947615 + RSINE1 SINE B4 3 163 -2 7 1283 317 374 8 8 chr15 91547475 91547599 -11947375 - MER45A DNA Tip100 0 178 55 7 1283 28 29 0 0 chr15 91547760 91547795 -11947179 + AT_rich Low_complexity Low_complexity 1 35 0 7 1283 1215 209 101 7 chr15 91547795 91548093 -11946881 - Lx9 LINE L1 -3 7641 7316 7 1283 504 137 0 0 chr15 91549258 91549331 -11945643 + (TG)n Simple_repeat Simple_repeat 1 73 0 7 1283 725 208 0 6 chr15 91549331 91549500 -11945474 + (TA)n Simple_repeat Simple_repeat 1 168 0 7 1283 23 0 0 0 chr15 91549909 91549932 -11945042 + AT_rich Low_complexity Low_complexity 1 23 0 8 1283 782 192 154 10 chr15 91549953 91550148 -11944826 - RMER1B Other Other -5 1061 839 8 1283 808 243 28 32 chr15 91550514 91550731 -11944243 + RMER1A Other Other 235 450 -580 8 1283 1608 292 13 22 chr15 91550725 91551212 -11943762 + RMER1A Other Other 15 455 -575 8 1283 3789 10 2 0 chr15 91551274 91551669 -11943305 - MTA_Mm LTR MaLR 0 396 1 8 1283 9847 19 19 1 chr15 91551669 91552747 -11942227 - MTA_Mm-int LTR MaLR 0 1098 1 8 1283 3778 10 2 0 chr15 91552747 91553142 -11941832 - MTA_Mm LTR MaLR 0 396 1 8 1283 691 296 39 6 chr15 91553143 91553323 -11941651 + RMER1A Other Other 1 186 -844 8 1283 268 200 20 0 chr15 91553324 91553374 -11941600 + RMER1A Other Other 533 583 -447 8 1283 3238 82 7 15 chr15 91553701 91554111 -11940863 - MTB_Mm LTR MaLR 0 407 1 8 1283 328 284 14 0 chr15 91554834 91554908 -11940066 + AluG_3 SINE Alu 147 221 -90 8 1283 228 254 0 125 chr15 91556886 91556958 -11938016 + B1F1 SINE Alu 46 108 -12 8 1283 389 281 104 28 chr15 91557238 91557537 -11937437 - L1MA7 LINE L1 -302 5989 5670 8 1283 480 292 149 10 chr15 91558220 91558414 -11936560 - RMER15 LTR ERVL -56 519 299 9 1283 2342 148 26 28 chr15 91558642 91559094 -11935880 - RMER19C LTR ERVK -94 517 1 9 1283 212 279 0 0 chr15 91559662 91559705 -11935269 - ID4_ SINE ID -20 63 21 9 1283 306 0 0 0 chr15 91560226 91560260 -11934714 + (CAAAA)n Simple_repeat Simple_repeat 5 38 0 9 1283 242 143 20 0 chr15 91560527 91560576 -11934398 + C-rich Low_complexity Low_complexity 5 54 0 9 1283 428 318 24 8 chr15 91560626 91560753 -11934221 - B1F SINE Alu -16 133 5 9 1283 1414 234 3 14 chr15 91561160 91561446 -11933528 - MTC LTR MaLR -138 283 1 9 1283 663 67 0 0 chr15 91562386 91562475 -11932499 + (TC)n Simple_repeat Simple_repeat 2 90 0 9 1283 1159 96 0 0 chr15 91562480 91562626 -11932348 - B1_Mus2 SINE Alu 0 147 2 9 1283 258 32 0 0 chr15 91562791 91562822 -11932152 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 1283 572 275 28 21 chr15 91562960 91563101 -11931873 - RSINE1 SINE B4 -21 144 3 1 1283 34 24 0 0 chr15 91563101 91563142 -11931832 + AT_rich Low_complexity Low_complexity 1 41 0 1 1283 252 264 13 92 chr15 91563473 91563569 -11931405 + ID4_ SINE ID 12 99 -53 1 1283 472 293 23 46 chr15 91564074 91564249 -11930725 - B4A SINE B4 -58 234 64 1 1283 897 62 0 0 chr15 91564689 91564818 -11930156 + (CA)n Simple_repeat Simple_repeat 2 130 0 1 1283 486 0 0 0 chr15 91565585 91565639 -11929335 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1283 531 0 0 0 chr15 91565639 91565697 -11929277 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 1283 702 299 73 11 chr15 91565837 91566124 -11928850 - Lx8 LINE L1 -324 7149 6845 1 1283 392 225 67 37 chr15 91566124 91566258 -11928716 + RSINE1 SINE B4 10 147 -18 1 1283 269 288 1 42 chr15 91566702 91566794 -11928180 + PB1D10 SINE Alu 5 90 -57 1 1283 1221 226 136 21 chr15 91567828 91568347 -11926627 - RLTR40 LTR ERVK -5 812 154 1 1283 1203 142 76 5 chr15 91568349 91568547 -11926427 + URR1A DNA MER1_type 4 215 -11 1 1283 675 229 13 7 chr15 91568538 91568692 -11926282 - RLTR40 LTR ERVK -662 155 1 1 1283 256 274 111 41 chr15 91569981 91570152 -11924822 + L1MC1 LINE L1 5819 6001 -332 1 1283 246 276 154 15 chr15 91570232 91570368 -11924606 + L1MC1 LINE L1 6164 6318 -26 1 1283 847 83 0 0 chr15 91570380 91570489 -11924485 + B2_Mm2 SINE B2 1 109 -86 1 1283 3156 276 107 37 chr15 91570727 91570839 -11924135 - Lx9 LINE L1 -15 7629 7506 1 1283 279 0 0 0 chr15 91570839 91570870 -11924104 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1283 3156 276 107 37 chr15 91570870 91571961 -11923013 - Lx9 LINE L1 -139 7505 6343 1 1283 537 16 0 0 chr15 91571965 91572027 -11922947 + (TC)n Simple_repeat Simple_repeat 1 62 0 1 1283 1441 270 26 26 chr15 91572048 91572501 -11922473 - L1M2 LINE L1 -1179 4964 4512 1 1283 28 29 0 0 chr15 91572993 91573028 -11921946 + AT_rich Low_complexity Low_complexity 1 35 0 1 1283 7629 92 8 7 chr15 91574166 91575312 -11919662 - L1_Mus3 LINE L1 -6 6632 5480 1 1283 346 236 91 9 chr15 91575704 91575859 -11919115 - L1MA6 LINE L1 -17 6283 6114 1 1283 1971 157 9 137 chr15 91576528 91576972 -11918002 - ORR1B1 LTR MaLR -7 387 1 1 1283 397 291 154 14 chr15 91577660 91577803 -11917171 + RSINE1 SINE B4 3 165 0 1 1283 23 0 0 0 chr15 91577831 91577854 -11917120 + AT_rich Low_complexity Low_complexity 1 23 0 1 1283 334 277 106 70 chr15 91578506 91578762 -11916212 - B4A SINE B4 -26 266 2 1 1283 1562 147 0 41 chr15 91578889 91579158 -11915816 + Lx3C LINE L1 6717 6974 -2 1 1283 489 142 88 9 chr15 91579198 91579312 -11915662 + Lx9 LINE L1 7520 7642 -2 1 1283 186 255 0 0 chr15 91579619 91579670 -11915304 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 1283 556 296 0 14 chr15 91580850 91580997 -11913977 - B1_Mur2 SINE Alu -4 145 1 1 1283 216 0 0 0 chr15 91581043 91581067 -11913907 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1283 300 233 0 0 chr15 91581093 91581166 -11913808 + CT-rich Low_complexity Low_complexity 4 76 0 1 1283 23 0 0 0 chr15 91582023 91582046 -11912928 + AT_rich Low_complexity Low_complexity 1 23 0 1 1283 266 292 11 11 chr15 91582093 91582193 -11912781 - MLT1A1 LTR MaLR -16 392 250 1 1283 21 0 0 0 chr15 91582996 91583017 -11911957 + AT_rich Low_complexity Low_complexity 1 21 0 1 1283 925 163 14 238 chr15 91583198 91583488 -11911486 - URR1B DNA MER1_type 0 225 1 1 1283 1897 53 0 13 chr15 91585279 91585510 -11909464 - L1Md_F2 LINE L1 -1 6581 6354 1 1283 29 0 0 0 chr15 91586084 91586113 -11908861 + AT_rich Low_complexity Low_complexity 1 29 0 1 1283 462 284 27 34 chr15 91587842 91587988 -11906986 + ID_B1 SINE B4 80 224 0 1 1283 897 81 0 0 chr15 91588956 91589079 -11905895 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 1 1283 214 156 0 99 chr15 91589380 91589451 -11905523 + A-rich Low_complexity Low_complexity 4 67 0 1 1283 588 292 13 21 chr15 91589619 91589786 -11905188 - B1F SINE Alu -18 293 1 1 1283 24 0 0 0 chr15 91589930 91589954 -11905020 + AT_rich Low_complexity Low_complexity 1 24 0 1 1283 1589 229 54 52 chr15 91590260 91590777 -11904197 - RLTR11A2 LTR ERVK 0 527 10 1 1283 2271 227 58 7 chr15 91591128 91591700 -11903274 - Lx9 LINE L1 -1 7643 7043 1 1283 490 269 25 31 chr15 91591774 91591935 -11903039 - RMER13A LTR ERVK -603 257 98 1 1283 3064 214 24 8 chr15 91592042 91592673 -11902301 - Lx9 LINE L1 -580 7064 6424 1 1283 5903 201 55 50 chr15 91592675 91592830 -11902144 - L1_Rod LINE L1 -2121 3726 3581 1 1283 387 0 0 0 chr15 91592830 91592873 -11902101 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1 1283 5903 201 55 50 chr15 91592873 91593606 -11901368 - L1_Rod LINE L1 -2267 3580 2869 1 1283 1586 48 0 11 chr15 91593606 91593795 -11901179 - B2_Mm2 SINE B2 -8 187 1 1 1283 5903 201 55 50 chr15 91593795 91594506 -11900468 - L1_Rod LINE L1 -2979 2868 2118 1 1283 225 108 0 0 chr15 91594514 91594551 -11900423 + (CAA)n Simple_repeat Simple_repeat 1 37 0 1 1283 234 333 62 0 chr15 91594551 91594632 -11900342 - MIR SINE MIR -160 102 17 1 1283 311 280 7 0 chr15 91596555 91596698 -11898276 + (CA)n Simple_repeat Simple_repeat 1 144 0 1 1283 249 284 0 13 chr15 91596701 91596776 -11898198 + (CATA)n Simple_repeat Simple_repeat 2 75 0 1 1283 602 229 6 0 chr15 91596779 91596958 -11898016 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1283 228 263 0 0 chr15 91596942 91597018 -11897956 + (CATA)n Simple_repeat Simple_repeat 3 78 0 1 1283 192 77 0 0 chr15 91597070 91597096 -11897878 + (CATATA)n Simple_repeat Simple_repeat 1 26 0 1 1283 22 80 0 0 chr15 91597441 91597491 -11897483 + AT_rich Low_complexity Low_complexity 1 50 0 1 1283 253 254 69 14 chr15 91597934 91598006 -11896968 + PB1 SINE Alu 16 91 -36 1 1283 623 206 85 31 chr15 91598144 91598274 -11896700 - B1_Mur1 SINE Alu -12 137 1 1 1283 662 178 8 15 chr15 91598275 91598406 -11896568 - B3 SINE B2 -3 213 84 1 1283 233 221 0 14 chr15 91598550 91598619 -11896355 + (TATG)n Simple_repeat Simple_repeat 2 69 0 1 1283 343 239 72 24 chr15 91598760 91598895 -11896079 - L1MA5 LINE L1 -392 5908 5748 1 1283 524 193 11 22 chr15 91598928 91599108 -11895866 + (TATG)n Simple_repeat Simple_repeat 1 178 0 1 1283 221 170 38 0 chr15 91599123 91599176 -11895798 + (TATG)n Simple_repeat Simple_repeat 4 58 0 1 1283 666 272 135 50 chr15 91599180 91599624 -11895350 - L1MA5 LINE L1 -512 5788 5307 1 1283 505 281 67 33 chr15 91599639 91599904 -11895070 - L1MA5 LINE L1 -933 5210 4906 1 1283 1399 320 109 60 chr15 91600157 91600897 -11894077 - L1MA5 LINE L1 -1653 4490 3692 1 1283 722 43 11 0 chr15 91600897 91600991 -11893983 + (TTCC)n Simple_repeat Simple_repeat 2 96 0 1 1283 580 291 94 35 chr15 91600993 91601196 -11893778 - ID_B1 SINE B4 -9 215 1 1 1283 1399 320 107 59 chr15 91601196 91602499 -11892475 - L1MA5 LINE L1 -2452 3691 2337 1 1283 1016 141 6 0 chr15 91602858 91603035 -11891939 + (TC)n Simple_repeat Simple_repeat 2 179 0 1 1283 938 157 6 0 chr15 91603043 91603221 -11891753 + CT-rich Low_complexity Low_complexity 1 179 0 1 1283 1173 22 0 0 chr15 91603528 91603663 -11891311 - L1_Mus3 LINE L1 -624 6014 5880 1 1283 5009 60 21 3 chr15 91603664 91604296 -11890678 + L1_Mus3 LINE L1 6010 6638 0 1 1283 1136 263 68 37 chr15 91604646 91605001 -11889973 - ORR1D2 LTR MaLR -2 368 3 1 1283 21 0 0 0 chr15 91605287 91605308 -11889666 + AT_rich Low_complexity Low_complexity 1 21 0 1 1283 401 279 49 6 chr15 91606342 91606504 -11888470 - L1MA8 LINE L1 -7 6284 6116 1 1283 645 269 245 3 chr15 91607638 91607951 -11887023 - MTD LTR MaLR -26 393 6 1 1283 574 249 71 66 chr15 91609524 91609735 -11885239 - B3 SINE B2 -1 215 4 1 1283 200 196 54 0 chr15 91611054 91611110 -11883864 + L2 LINE L2 2557 2615 -804 1 1283 594 0 0 0 chr15 91611299 91611365 -11883609 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 1283 926 194 179 34 chr15 91612356 91612713 -11882261 - RLTR9E LTR ERVK 0 409 1 1 1283 745 223 41 14 chr15 91612713 91612931 -11882043 - MMETn-int LTR ERVK 0 4844 4621 1 1283 259 159 22 22 chr15 91613250 91613295 -11881679 + B1F SINE Alu 95 139 -10 1 1283 253 227 13 26 chr15 91613295 91613372 -11881602 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 1 1283 284 64 0 21 chr15 91615533 91615581 -11879393 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1 1283 224 212 171 57 chr15 91615799 91615869 -11879105 - B1F SINE Alu -66 83 6 1 1283 25 0 0 0 chr15 91615883 91615908 -11879066 + AT_rich Low_complexity Low_complexity 1 25 0 1 1283 269 369 7 0 chr15 91616054 91616368 -11878606 + (TG)n Simple_repeat Simple_repeat 1 316 0 1 1283 281 385 0 0 chr15 91616390 91616564 -11878410 + (TG)n Simple_repeat Simple_repeat 1 174 0 1 1283 269 389 0 0 chr15 91616586 91616766 -11878208 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1283 216 397 0 0 chr15 91616908 91617082 -11877892 + (TG)n Simple_repeat Simple_repeat 1 174 0 1 1283 475 264 82 92 chr15 91618390 91618782 -11876192 - RMER10A LTR ERVL -4 438 51 1 1284 207 162 0 0 chr15 91620348 91620385 -11874589 + CT-rich Low_complexity Low_complexity 1 37 0 1 1284 265 264 0 40 chr15 91620400 91620475 -11874499 + CT-rich Low_complexity Low_complexity 3 74 0 1 1284 447 250 162 16 chr15 91620483 91620674 -11874300 - ID_B1 SINE B4 -2 222 4 1 1284 721 253 7 0 chr15 91621093 91621239 -11873735 + RSINE1 SINE B4 2 148 -17 1 1284 347 0 23 0 chr15 91621378 91621421 -11873553 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 1284 363 256 139 8 chr15 91621850 91621972 -11873002 - MLT1A1 LTR MaLR -270 138 1 1 1284 222 164 0 0 chr15 91622003 91622058 -11872916 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 1284 877 237 29 29 chr15 91622115 91622354 -11872620 - RCHARR1 DNA MER1_type 0 974 736 1 1284 843 232 192 18 chr15 91622340 91622673 -11872301 - RCHARR1 DNA MER1_type -505 469 79 1 1284 594 303 46 0 chr15 91622677 91622829 -11872145 + B4A SINE B4 5 163 -129 1 1284 381 309 0 11 chr15 91622927 91623022 -11871952 - RCHARR1 DNA MER1_type -880 94 1 1 1284 714 82 0 0 chr15 91623427 91623525 -11871449 + (TTCC)n Simple_repeat Simple_repeat 2 99 0 1 1284 291 285 95 68 chr15 91623962 91624109 -11870865 + B4A SINE B4 4 154 -138 1 1284 354 23 0 0 chr15 91624166 91624209 -11870765 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1284 3387 178 36 58 chr15 91624619 91625327 -11869647 + Lx5 LINE L1 6319 7003 -47 1 1284 2332 203 16 18 chr15 91625327 91625833 -11869141 - RLTR16 LTR ERVK 0 505 1 1 1284 3387 178 36 58 chr15 91625833 91625869 -11869105 + Lx5 LINE L1 7004 7047 -3 1 1284 1340 87 11 0 chr15 91625975 91626160 -11868814 - B2_Mm1t SINE B2 -6 187 1 1 1284 334 345 18 0 chr15 91627564 91627677 -11867297 - ID_B1 SINE B4 -11 213 99 1 1284 28 61 0 0 chr15 91628087 91628136 -11866838 + AT_rich Low_complexity Low_complexity 1 49 0 1 1284 1204 142 58 241 chr15 91628436 91628616 -11866358 + RMER17C LTR ERVK 3 179 -231 1 1284 1313 52 0 11 chr15 91628616 91628791 -11866183 + (TCTCC)n Simple_repeat Simple_repeat 5 177 0 2 1284 1204 142 58 241 chr15 91628791 91629109 -11865865 + RMER17C LTR ERVK 180 410 0 1 1284 2226 247 83 21 chr15 91629754 91630847 -11864127 + L1_Mur3 LINE L1 894 2053 -3827 2 1284 1225 54 0 0 chr15 91630856 91631003 -11863971 + B1_Mus1 SINE Alu 2 148 0 2 1284 304 247 51 85 chr15 91631028 91631205 -11863769 + L1_Mur3 LINE L1 2006 2176 -3704 2 1284 23 54 0 0 chr15 91631497 91631534 -11863440 + AT_rich Low_complexity Low_complexity 1 37 0 2 1284 248 252 64 150 chr15 91632597 91632737 -11862237 + RMER12 LTR ERVK 724 851 -471 2 1284 345 100 0 0 chr15 91634173 91634223 -11860751 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1284 485 299 7 26 chr15 91634387 91634538 -11860436 + RSINE1 SINE B4 5 152 -13 2 1284 428 328 32 75 chr15 91634994 91635182 -11859792 - MER67D LTR ERV1 -106 408 229 2 1284 2939 61 3 13 chr15 91635441 91635857 -11859117 - L1_Mus1 LINE L1 0 6567 6175 2 1284 2205 64 0 0 chr15 91635857 91636152 -11858822 + L1_Mus1 LINE L1 5853 6147 -420 2 1284 261 236 192 14 chr15 91636712 91636785 -11858189 + URR1A DNA MER1_type 1 86 -140 2 1284 21 0 0 0 chr15 91636885 91636906 -11858068 + AT_rich Low_complexity Low_complexity 1 21 0 2 1284 281 285 87 40 chr15 91638109 91638259 -11856715 + Lx8 LINE L1 7039 7195 -278 2 1284 282 390 72 10 chr15 91638405 91638612 -11856362 + MIRb SINE MIR 29 248 -20 2 1284 259 360 58 69 chr15 91639303 91639476 -11855498 + MER5B DNA MER1_type 1 171 -7 2 1284 201 354 52 17 chr15 91639897 91640012 -11854962 + MIRc SINE MIR 3 121 -147 2 1284 209 307 24 73 chr15 91640673 91640796 -11854178 - L2c LINE L2 -163 3224 3108 2 1284 582 15 0 0 chr15 91641746 91641813 -11853161 + (CATCT)n Simple_repeat Simple_repeat 5 71 0 2 1284 300 53 0 0 chr15 91641835 91641873 -11853101 + (TCTG)n Simple_repeat Simple_repeat 3 40 0 2 1284 559 273 67 40 chr15 91642262 91642487 -11852487 + MER2 DNA MER2_type 81 311 -34 2 1284 1127 55 14 7 chr15 91642889 91643035 -11851939 - B1_Mm SINE Alu 0 147 1 2 1284 181 435 14 7 chr15 91644321 91644460 -11850514 + L2a LINE L2 3283 3422 -4 2 1284 1145 92 17 34 chr15 91644758 91644937 -11850037 + B2_Mm2 SINE B2 4 179 -16 2 1284 227 31 31 0 chr15 91644937 91644969 -11850005 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 1284 23 0 0 0 chr15 91646078 91646101 -11848873 + AT_rich Low_complexity Low_complexity 1 23 0 2 1284 27 81 0 0 chr15 91646173 91646235 -11848739 + AT_rich Low_complexity Low_complexity 1 62 0 2 1284 440 283 57 32 chr15 91646871 91647028 -11847946 - RSINE1 SINE B4 -4 161 1 2 1284 254 89 44 0 chr15 91647162 91647207 -11847767 + (CATA)n Simple_repeat Simple_repeat 2 48 0 2 1284 3864 33 4 0 chr15 91647567 91648026 -11846948 - L1Md_F2 LINE L1 0 6582 6122 2 1284 1831 207 67 13 chr15 91648051 91648437 -11846537 + MTB_Mm LTR MaLR 1 407 0 2 1284 614 190 0 16 chr15 91648550 91648673 -11846301 + B4 SINE B4 172 292 0 2 1284 316 226 0 0 chr15 91648673 91648735 -11846239 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1284 560 186 11 34 chr15 91648736 91648914 -11846060 + (CATA)n Simple_repeat Simple_repeat 4 177 0 2 1284 433 154 11 11 chr15 91650847 91650939 -11844035 + GA-rich Low_complexity Low_complexity 4 95 0 2 1284 1555 194 53 13 chr15 91651150 91651453 -11843521 - ORR1B2 LTR MaLR -52 315 1 2 1284 6954 192 43 17 chr15 91651453 91652887 -11842087 - ORR1B2-int LTR MaLR 0 1509 39 2 1284 186 209 0 0 chr15 91652929 91652972 -11842002 + (TGG)n Simple_repeat Simple_repeat 3 45 0 2 1284 1190 62 0 0 chr15 91654228 91654374 -11840600 - B1_Mus2 SINE Alu 0 147 2 2 1284 2055 180 0 44 chr15 91655207 91655591 -11839383 - ORR1B2 LTR MaLR 0 367 1 2 1284 822 73 0 0 chr15 91656416 91656526 -11838448 + (TCTA)n Simple_repeat Simple_repeat 4 113 0 2 1284 817 253 36 16 chr15 91656573 91656766 -11838208 - ID_B1 SINE B4 -22 202 6 2 1284 1065 270 65 23 chr15 91657964 91658233 -11836741 + Lx9 LINE L1 6750 7038 -606 2 1284 422 0 38 0 chr15 91658233 91658286 -11836688 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 2 1284 1065 270 65 23 chr15 91658286 91658369 -11836605 + Lx9 LINE L1 7039 7117 -527 2 1284 1758 127 20 27 chr15 91658369 91658668 -11836306 - MTB_Mm LTR MaLR -8 399 103 2 1284 412 299 16 16 chr15 91658673 91658802 -11836172 + Lx9 LINE L1 7107 7235 -409 2 1284 24 53 0 0 chr15 91658943 91658981 -11835993 + AT_rich Low_complexity Low_complexity 1 38 0 2 1284 24 67 0 0 chr15 91659402 91659447 -11835527 + AT_rich Low_complexity Low_complexity 1 45 0 2 1284 966 145 89 0 chr15 91659447 91659525 -11835449 - Lx LINE L1 -3 6651 6574 2 1284 189 0 0 0 chr15 91659525 91659546 -11835428 + (TCCCC)n Simple_repeat Simple_repeat 1 21 0 2 1284 966 145 89 0 chr15 91659546 91659646 -11835328 - Lx LINE L1 -81 6573 6458 2 1284 1074 201 116 60 chr15 91659871 91659942 -11835032 - RMER2 LTR ERV1 -231 336 266 2 1284 284 0 0 27 chr15 91659942 91659979 -11834995 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 2 1284 1074 201 116 60 chr15 91659979 91660225 -11834749 - RMER2 LTR ERV1 -302 265 2 2 1284 404 322 62 36 chr15 91660821 91661237 -11833737 - L1M2 LINE L1 -4270 2579 2153 2 1284 5533 68 3 7 chr15 91661793 91662522 -11832452 - L1Md_F2 LINE L1 0 6582 5857 2 1284 1297 62 0 6 chr15 91662781 91662958 -11832016 - L1_Mus2 LINE L1 -136 6430 6255 2 1284 750 167 20 0 chr15 91662959 91663109 -11831865 + L1_Mus3 LINE L1 6481 6633 -5 2 1284 205 348 12 19 chr15 91663137 91663298 -11831676 + A-rich Low_complexity Low_complexity 2 161 0 2 1284 203 354 0 33 chr15 91663232 91663352 -11831622 + GA-rich Low_complexity Low_complexity 1 116 0 2 1284 271 45 22 22 chr15 91663456 91663502 -11831472 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 2 1284 380 283 175 37 chr15 91667318 91667564 -11827410 - B4A SINE B4 -11 281 2 2 1284 342 0 0 0 chr15 91669008 91669046 -11825928 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1284 600 53 0 0 chr15 91669440 91669516 -11825458 + (CA)n Simple_repeat Simple_repeat 1 76 0 2 1284 291 54 0 0 chr15 91672040 91672077 -11822897 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 2 1284 633 125 0 0 chr15 91676458 91676478 -11818496 + (TCC)n Simple_repeat Simple_repeat 2 21 0 2 1284 1431 50 0 0 chr15 91676478 91676658 -11818316 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 2 1284 633 125 0 0 chr15 91676658 91676741 -11818233 + (TCC)n Simple_repeat Simple_repeat 3 85 0 2 1284 362 304 231 42 chr15 91676743 91677076 -11817898 - HAL1-3A_ME LINE L1 -424 2434 2039 2 1284 234 207 0 0 chr15 91677643 91677701 -11817273 + T-rich Low_complexity Low_complexity 5 62 0 2 1284 1179 89 0 0 chr15 91680040 91680302 -11814672 + (TTC)n Simple_repeat Simple_repeat 1 262 0 2 1284 325 353 32 39 chr15 91680325 91680481 -11814493 - HAL1-3A_ME LINE L1 -420 2438 2284 2 1284 257 183 17 0 chr15 91680482 91680542 -11814432 + CT-rich Low_complexity Low_complexity 4 64 0 2 1284 234 207 0 0 chr15 91681157 91681215 -11813759 + T-rich Low_complexity Low_complexity 5 62 0 2 1284 578 232 6 0 chr15 91683583 91683747 -11811227 + CT-rich Low_complexity Low_complexity 2 166 0 2 1284 201 147 0 0 chr15 91685150 91685184 -11809790 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 2 1284 191 105 0 50 chr15 91687299 91687311 -11807663 + C-rich Low_complexity Low_complexity 27 38 0 2 1284 1194 107 0 0 chr15 91687311 91687488 -11807486 + (TCC)n Simple_repeat Simple_repeat 3 179 0 2 1284 191 105 0 50 chr15 91687488 91687515 -11807459 + C-rich Low_complexity Low_complexity 1 26 0 2 1284 204 135 0 0 chr15 91687775 91687812 -11807162 + (TCC)n Simple_repeat Simple_repeat 3 39 0 2 1284 1071 117 0 0 chr15 91689222 91689402 -11805572 + (GTTTG)n Simple_repeat Simple_repeat 1 180 0 2 1284 305 47 23 0 chr15 91690448 91690491 -11804483 + (TTG)n Simple_repeat Simple_repeat 2 45 0 2 1284 577 74 32 0 chr15 91692149 91692244 -11802730 + (TCTA)n Simple_repeat Simple_repeat 3 100 0 2 1284 35 24 0 0 chr15 91694312 91694354 -11800620 + AT_rich Low_complexity Low_complexity 1 42 0 2 1284 4417 160 51 26 chr15 91694354 91695234 -11799740 - RLTR13D6 LTR ERVK 0 902 1 2 1284 240 111 0 0 chr15 91695235 91695271 -11799703 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2 1284 1259 233 89 3 chr15 91695335 91695671 -11799303 - Lx2B LINE L1 -8 6992 6628 2 1284 216 0 0 0 chr15 91696689 91696713 -11798261 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1284 441 328 8 15 chr15 91697040 91697173 -11797801 - B1F1 SINE Alu -8 141 10 2 1284 262 282 14 0 chr15 91697239 91697310 -11797664 - ID4_ SINE ID -10 73 2 2 1284 310 21 43 0 chr15 91697429 91697476 -11797498 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 2 1284 4194 36 2 2 chr15 91697620 91698121 -11796853 + L1_Mus1 LINE L1 6063 6563 -4 2 1284 486 61 0 0 chr15 91698121 91698187 -11796787 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 1284 590 249 112 0 chr15 91698676 91698831 -11796143 - B3A SINE B2 -2 193 3 2 1284 528 59 0 0 chr15 91699401 91699469 -11795505 + (GGGA)n Simple_repeat Simple_repeat 4 71 0 2 1284 222 241 0 33 chr15 91699481 91699541 -11795433 + G-rich Low_complexity Low_complexity 1 58 0 2 1284 387 0 0 0 chr15 91699725 91699768 -11795206 + (TC)n Simple_repeat Simple_repeat 2 44 0 2 1284 474 18 0 0 chr15 91699773 91699828 -11795146 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1284 1775 231 32 64 chr15 91699908 91700469 -11794505 - Lx7 LINE L1 -25 7671 7129 2 1284 638 109 10 0 chr15 91702509 91702610 -11792364 + (GA)n Simple_repeat Simple_repeat 1 102 0 2 1284 291 104 0 0 chr15 91702609 91702657 -11792317 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 2 1284 310 211 22 88 chr15 91703914 91704096 -11790878 + Lx7 LINE L1 7405 7574 -122 2 1284 1724 67 0 0 chr15 91704114 91704338 -11790636 - L1Md_T LINE L1 0 6582 6359 2 1284 548 16 0 0 chr15 91704338 91704402 -11790572 + L1Md_A LINE L1 6304 6367 -215 2 1284 582 152 62 31 chr15 91704404 91704533 -11790441 + Lx7 LINE L1 7564 7696 0 2 1284 22 0 0 0 chr15 91705167 91705189 -11789785 + AT_rich Low_complexity Low_complexity 1 22 0 2 1284 25 0 0 0 chr15 91705520 91705545 -11789429 + GC_rich Low_complexity Low_complexity 1 25 0 2 1284 292 281 0 30 chr15 91705635 91705734 -11789240 - L1MA9 LINE L1 -429 5883 5788 2 1284 23 0 0 0 chr15 91705758 91705781 -11789193 + GC_rich Low_complexity Low_complexity 1 23 0 3 1284 333 0 0 0 chr15 91705972 91706009 -11788965 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 3 1284 657 0 0 0 chr15 91706169 91706242 -11788732 + (TTTC)n Simple_repeat Simple_repeat 3 75 0 3 1284 1143 52 0 0 chr15 91706243 91706379 -11788595 - B1_Mm SINE Alu -11 136 1 3 1284 453 313 39 49 chr15 91706381 91706894 -11788080 - L1MA9 LINE L1 -866 5274 4766 2 1284 415 310 109 13 chr15 91709744 91709973 -11785001 + MER99 DNA hAT? 2 252 -579 3 1284 277 347 49 0 chr15 91709988 91710132 -11784842 + MER99 DNA hAT? 298 448 -383 3 1284 767 89 9 42 chr15 91710193 91710406 -11784568 + (TCTA)n Simple_repeat Simple_repeat 1 205 0 3 1284 688 289 29 16 chr15 91710441 91710747 -11784227 - L1_Rod LINE L1 0 5847 5538 3 1284 2818 295 62 18 chr15 91711297 91712259 -11782715 - Lx8 LINE L1 -9 7464 6460 3 1284 557 340 18 18 chr15 91713237 91713510 -11781464 + B4A SINE B4 2 274 -18 3 1284 231 114 0 0 chr15 91713549 91713584 -11781390 + (GAA)n Simple_repeat Simple_repeat 2 36 0 3 1284 543 278 23 75 chr15 91713635 91713849 -11781125 + B4A SINE B4 65 267 -25 3 1284 626 68 11 0 chr15 91713850 91713938 -11781036 + (CA)n Simple_repeat Simple_repeat 2 90 0 3 1284 1001 127 13 0 chr15 91714800 91714957 -11780017 + RLTR40 LTR ERVK 24 182 -635 3 1284 577 294 71 10 chr15 91715042 91715238 -11779736 + B3 SINE B2 3 210 -6 3 1284 3639 72 21 38 chr15 91715915 91716445 -11778529 - L1Md_F2 LINE L1 0 6582 6062 3 1284 500 274 58 29 chr15 91717626 91717765 -11777209 + B1F SINE Alu 1 143 -6 3 1284 208 163 23 0 chr15 91718940 91718983 -11775991 + (ATTG)n Simple_repeat Simple_repeat 1 44 0 3 1284 1059 123 257 14 chr15 91718983 91719197 -11775777 - RLTR22_Mur LTR ERVK 0 1848 1543 3 1284 5543 92 19 16 chr15 91719566 91719675 -11775299 - RLTR22_Mur LTR ERVK -1016 832 721 3 1284 180 0 0 0 chr15 91719675 91719695 -11775279 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 1284 5543 92 19 16 chr15 91719695 91720414 -11774560 - RLTR22_Mur LTR ERVK -1128 720 1 3 1284 206 219 0 0 chr15 91721658 91721699 -11773275 + CT-rich Low_complexity Low_complexity 5 45 0 3 1284 810 147 23 16 chr15 91721715 91721971 -11773003 + (TCTA)n Simple_repeat Simple_repeat 1 257 0 3 1284 381 274 5 27 chr15 91721998 91722182 -11772792 + CT-rich Low_complexity Low_complexity 1 180 0 3 1284 764 190 0 6 chr15 91722182 91722351 -11772623 + (TA)n Simple_repeat Simple_repeat 2 169 0 3 1284 238 318 35 23 chr15 91722356 91722443 -11772531 - B1F1 SINE Alu -49 100 13 3 1284 21 36 0 0 chr15 91725124 91725152 -11769822 + AT_rich Low_complexity Low_complexity 1 28 0 3 1284 836 164 0 23 chr15 91725175 91725306 -11769668 + B1_Mur2 SINE Alu 3 130 -19 3 1284 325 172 59 20 chr15 91725452 91725553 -11769421 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 3 1284 213 121 0 0 chr15 91725555 91725588 -11769386 + (TTA)n Simple_repeat Simple_repeat 3 35 0 3 1284 200 64 85 0 chr15 91725585 91725632 -11769342 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 3 1284 3363 55 5 2 chr15 91725644 91726043 -11768931 - MTB LTR MaLR 0 400 1 3 1284 260 296 232 18 chr15 91726131 91726441 -11768533 - L1M2 LINE L1 -538 5762 5388 3 1284 1216 284 163 28 chr15 91726443 91726940 -11768034 - L1M2 LINE L1 -1209 4934 4344 3 1284 2468 150 62 25 chr15 91726940 91727344 -11767630 + MTC LTR MaLR 1 419 -2 3 1284 1216 288 150 48 chr15 91727344 91727944 -11767030 - L1M2 LINE L1 -1800 4343 3744 3 1284 416 278 17 42 chr15 91729219 91729339 -11765635 - B1F SINE Alu -29 120 4 3 1284 279 139 0 0 chr15 91729373 91729416 -11765558 + URR1B DNA MER1_type 54 96 -129 3 1284 225 94 0 0 chr15 91732041 91732073 -11762901 + (CAA)n Simple_repeat Simple_repeat 1 32 0 3 1284 603 237 0 0 chr15 91734010 91734187 -11760787 + (CA)n Simple_repeat Simple_repeat 2 178 0 3 1284 342 0 0 0 chr15 91734210 91734248 -11760726 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1284 43 35 0 0 chr15 91734654 91734711 -11760263 + AT_rich Low_complexity Low_complexity 1 57 0 3 1284 323 276 25 3 chr15 91735528 91735815 -11759159 + (TA)n Simple_repeat Simple_repeat 1 293 0 3 1284 234 105 0 0 chr15 91736476 91736514 -11758460 + (A)n Simple_repeat Simple_repeat 1 38 0 3 1284 300 127 0 0 chr15 91736973 91737028 -11757946 + (CCA)n Simple_repeat Simple_repeat 3 57 0 3 1284 387 73 0 0 chr15 91737462 91737517 -11757457 + (CCA)n Simple_repeat Simple_repeat 3 57 0 3 1284 387 73 0 0 chr15 91737951 91738006 -11756968 + (CCA)n Simple_repeat Simple_repeat 3 57 0 3 1284 387 73 0 0 chr15 91738440 91738495 -11756479 + (CCA)n Simple_repeat Simple_repeat 3 57 0 3 1284 387 73 0 0 chr15 91738930 91738985 -11755989 + (CCA)n Simple_repeat Simple_repeat 3 57 0 3 1284 387 73 0 0 chr15 91739419 91739474 -11755500 + (CCA)n Simple_repeat Simple_repeat 3 57 0 3 1284 387 73 0 0 chr15 91739908 91739963 -11755011 + (CCA)n Simple_repeat Simple_repeat 3 57 0 3 1284 354 91 0 0 chr15 91740397 91740452 -11754522 + (CCA)n Simple_repeat Simple_repeat 3 57 0 3 1284 2748 96 56 10 chr15 91742495 91742886 -11752088 - RLTR9E LTR ERVK 0 409 1 3 1284 33 0 0 0 chr15 91742923 91742956 -11752018 + AT_rich Low_complexity Low_complexity 1 33 0 3 1284 193 370 0 12 chr15 91744244 91744326 -11750648 + L2 LINE L2 448 528 -2891 3 1284 484 287 70 23 chr15 91744916 91745105 -11749869 - L1_Mur3 LINE L1 -55 5825 5634 3 1284 564 29 0 0 chr15 91745105 91745175 -11749799 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 3 1284 484 287 70 23 chr15 91745175 91745199 -11749775 - L1_Mur3 LINE L1 -247 5633 5602 3 1284 402 311 203 8 chr15 91745398 91745644 -11749330 - MER67C LTR ERV1 0 711 418 3 1284 269 286 153 0 chr15 91746980 91747078 -11747896 - B1F SINE Alu -32 117 5 3 1284 262 285 15 51 chr15 91747319 91747456 -11747518 + GA-rich Low_complexity Low_complexity 2 133 0 3 1284 488 209 0 9 chr15 91747764 91747880 -11747094 + Lx9 LINE L1 7504 7618 -26 3 1284 355 326 36 21 chr15 91748477 91748671 -11746303 + L1MC LINE L1 5427 5623 -2259 3 1284 23 33 0 0 chr15 91750174 91750204 -11744770 + AT_rich Low_complexity Low_complexity 1 30 0 3 1285 3545 186 32 7 chr15 91750846 91751916 -11743058 - L1_Mur3 LINE L1 -3923 1957 859 3 1285 805 289 22 50 chr15 91751910 91752270 -11742704 - L1_Mur3 LINE L1 -7167 561 212 3 1285 455 305 69 47 chr15 91752453 91752669 -11742305 - L1_Rod LINE L1 -439 5408 5189 3 1285 315 0 0 0 chr15 91752669 91752704 -11742270 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1285 455 319 69 69 chr15 91752704 91753035 -11741939 - L1_Rod LINE L1 -891 5252 4923 3 1285 544 283 40 60 chr15 91753038 91753237 -11741737 + B3A SINE B2 4 198 0 3 1285 342 327 39 0 chr15 91754862 91754966 -11740008 - PB1D10 SINE Alu -8 109 2 3 1285 513 0 0 0 chr15 91755829 91755886 -11739088 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 1285 21 36 0 0 chr15 91756390 91756418 -11738556 + AT_rich Low_complexity Low_complexity 1 28 0 3 1285 342 0 0 0 chr15 91757980 91758018 -11736956 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1285 1545 146 0 34 chr15 91759564 91759798 -11735176 + URR1A DNA MER1_type 1 226 0 3 1285 924 239 20 15 chr15 91759938 91760138 -11734836 - B3 SINE B2 -1 215 15 3 1285 224 30 0 29 chr15 91761098 91761132 -11733842 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 3 1285 1268 55 7 0 chr15 91761136 91761282 -11733692 - B1_Mm SINE Alu 0 147 1 3 1285 552 265 45 50 chr15 91761328 91761507 -11733467 - B3 SINE B2 0 216 39 3 1285 249 232 14 0 chr15 91761533 91761602 -11733372 + (TA)n Simple_repeat Simple_repeat 1 70 0 3 1285 43 56 0 0 chr15 91761675 91761746 -11733228 + AT_rich Low_complexity Low_complexity 1 71 0 3 1285 1989 196 10 26 chr15 91761924 91762312 -11732662 - MTD LTR MaLR -13 406 25 3 1285 4925 34 0 5 chr15 91763374 91763929 -11731045 + L1Md_F2 LINE L1 6031 6582 0 3 1285 1056 117 0 0 chr15 91765586 91765749 -11729225 + (TTC)n Simple_repeat Simple_repeat 3 165 0 3 1285 267 355 45 9 chr15 91766158 91766269 -11728705 + LTR16A LTR ERVL 11 125 -326 3 1285 281 333 97 40 chr15 91766360 91766535 -11728439 + LTR16A LTR ERVL 262 446 -5 3 1285 183 373 37 60 chr15 91766970 91767104 -11727870 + L2a LINE L2 3287 3417 -9 3 1285 256 258 158 21 chr15 91767231 91767326 -11727648 + L4 LINE RTE 1359 1466 -563 3 1285 234 0 0 0 chr15 91767478 91767504 -11727470 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 1285 396 0 0 0 chr15 91767504 91767547 -11727427 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 1285 1376 259 36 17 chr15 91767658 91768015 -11726959 - ORR1D2 LTR MaLR 0 370 7 3 1285 980 249 49 74 chr15 91768918 91769332 -11725642 + RLTR11B LTR ERVK 1 412 -29 3 1285 1218 291 46 32 chr15 91769419 91769708 -11725266 + MTE2a LTR MaLR 6 301 -78 3 1285 2290 167 49 20 chr15 91769708 91769932 -11725042 - MTC LTR MaLR 0 421 203 3 1285 225 0 0 0 chr15 91769932 91769957 -11725017 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 3 1285 2290 167 49 20 chr15 91769957 91770141 -11724833 - MTC LTR MaLR -219 202 2 3 1285 1218 291 46 32 chr15 91770141 91770220 -11724754 + MTE2a LTR MaLR 302 379 0 3 1285 212 283 0 0 chr15 91770565 91770618 -11724356 + PB1 SINE Alu 72 124 -3 3 1285 4928 242 28 21 chr15 91770840 91772025 -11722949 + Lx9 LINE L1 6306 7498 -146 3 1285 253 242 42 52 chr15 91772024 91772120 -11722854 - L1M4 LINE L1 -550 5634 5540 3 1285 387 0 0 0 chr15 91772124 91772167 -11722807 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1285 267 204 0 0 chr15 91772704 91772748 -11722226 - ID4 SINE ID -8 75 32 3 1285 911 149 22 40 chr15 91774263 91774489 -11720485 + MTB_Mm LTR MaLR 2 227 -169 3 1285 22 0 0 0 chr15 91774598 91774620 -11720354 + AT_rich Low_complexity Low_complexity 1 22 0 3 1285 307 315 17 92 chr15 91775624 91775743 -11719231 + MLT1H LTR MaLR 188 297 -252 3 1285 489 191 85 48 chr15 91776438 91776603 -11718371 + RLTR15 LTR ERVK 1 171 -188 3 1285 366 271 40 23 chr15 91776645 91776819 -11718155 + RLTR15 LTR ERVK 165 341 -18 3 1285 264 30 0 0 chr15 91776831 91776864 -11718110 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1285 234 333 42 56 chr15 91777368 91777511 -11717463 + MER57E1 LTR ERV1 86 226 -146 3 1285 995 323 41 39 chr15 91777931 91778392 -11716582 - MT2A LTR ERVL -71 462 1 3 1285 243 280 108 49 chr15 91778432 91778635 -11716339 + MTEb LTR MaLR 163 377 -2 3 1285 432 0 0 0 chr15 91779146 91779194 -11715780 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1285 514 270 9 0 chr15 91779355 91779470 -11715504 - B1_Mur1 SINE Alu -15 134 19 4 1285 427 333 59 0 chr15 91779509 91779662 -11715312 + RSINE1 SINE B4 2 163 -2 4 1285 3044 75 19 2 chr15 91779760 91780172 -11714802 + BGLII LTR ERVK 3 421 0 4 1285 23 54 0 0 chr15 91780587 91780624 -11714350 + AT_rich Low_complexity Low_complexity 1 37 0 4 1285 1585 120 24 230 chr15 91780814 91781322 -11713652 + RLTR23 LTR ERV1 1 403 -27 4 1285 261 235 14 14 chr15 91781834 91781903 -11713071 - MER73 LTR ERVL -15 629 561 4 1285 1348 71 33 5 chr15 91782903 91783087 -11711887 + B2_Mm2 SINE B2 1 189 -6 4 1285 562 265 26 91 chr15 91783216 91783448 -11711526 + MER46C DNA MER2_type 19 235 -103 4 1285 259 333 91 23 chr15 91783516 91783691 -11711283 + MLT1D LTR MaLR 1 187 -318 4 1285 782 243 10 10 chr15 91783926 91784130 -11710844 - ORR1D1 LTR MaLR -170 204 1 4 1285 30 27 0 0 chr15 91784404 91784441 -11710533 + AT_rich Low_complexity Low_complexity 1 37 0 4 1285 846 225 135 39 chr15 91784501 91784783 -11710191 - RLTR40 LTR ERVK -490 327 19 4 1285 3225 112 55 0 chr15 91785953 91786428 -11708546 + Lx2A1 LINE L1 6506 7006 -2 4 1285 834 123 0 0 chr15 91788142 91788272 -11706702 + (TTCC)n Simple_repeat Simple_repeat 3 132 0 4 1285 180 176 0 0 chr15 91788282 91788316 -11706658 + CT-rich Low_complexity Low_complexity 3 36 0 4 1285 248 102 0 20 chr15 91788569 91788619 -11706355 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 4 1285 366 226 129 21 chr15 91788650 91788790 -11706184 + Lx5 LINE L1 6008 6162 -888 4 1285 1918 111 19 19 chr15 91788811 91789124 -11705850 + ORR1A2 LTR MaLR 3 315 -12 4 1285 211 366 20 44 chr15 91789337 91789540 -11705434 - MIR SINE MIR -18 244 47 4 1285 1009 233 128 58 chr15 91789840 91790119 -11704855 + Lx9 LINE L1 7215 7488 -156 4 1285 261 0 0 0 chr15 91790119 91790148 -11704826 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1285 1009 233 128 58 chr15 91790148 91790268 -11704706 + Lx9 LINE L1 7489 7641 -3 4 1285 2488 172 102 73 chr15 91791712 91792594 -11702380 + RLTR25A LTR ERVK 1 1028 0 4 1285 3742 105 20 4 chr15 91792750 91793296 -11701678 - Lx2 LINE L1 0 6997 6443 4 1285 207 0 0 0 chr15 91794383 91794406 -11700568 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1285 525 174 0 0 chr15 91794606 91794692 -11700282 + B1_Mus2 SINE Alu 62 147 0 4 1285 21 36 0 0 chr15 91795468 91795496 -11699478 + AT_rich Low_complexity Low_complexity 1 28 0 4 1285 2539 147 8 47 chr15 91796260 91796730 -11698244 - RLTR11B LTR ERVK 0 453 2 4 1285 366 153 35 18 chr15 91797345 91797458 -11697516 + (TA)n Simple_repeat Simple_repeat 1 115 0 4 1285 272 200 15 0 chr15 91797660 91797725 -11697249 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 1285 273 266 104 21 chr15 91797844 91797940 -11697034 - PB1D9 SINE Alu -8 112 9 4 1285 591 15 0 0 chr15 91798061 91798129 -11696845 + (TG)n Simple_repeat Simple_repeat 2 69 0 4 1285 826 168 175 50 chr15 91798584 91798784 -11696190 + URR1B DNA MER1_type 1 225 0 4 1285 330 148 0 0 chr15 91798799 91798853 -11696121 + URR1B DNA MER1_type 172 225 0 4 1285 759 313 30 15 chr15 91800266 91800449 -11694525 - B4A SINE B4 -19 273 89 4 1285 576 0 0 0 chr15 91800449 91800513 -11694461 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 4 1285 759 313 30 15 chr15 91800513 91800598 -11694376 - B4A SINE B4 -204 88 3 4 1285 217 132 0 0 chr15 91800829 91800867 -11694107 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 4 1285 21 0 0 0 chr15 91801122 91801143 -11693831 + AT_rich Low_complexity Low_complexity 1 21 0 4 1285 669 25 0 0 chr15 91801151 91801230 -11693744 + (GA)n Simple_repeat Simple_repeat 1 79 0 4 1285 460 260 12 23 chr15 91801255 91801428 -11693546 + (TG)n Simple_repeat Simple_repeat 1 171 0 4 1285 239 146 0 18 chr15 91801471 91801527 -11693447 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1285 373 309 58 13 chr15 91801592 91801746 -11693228 - RSINE1 SINE B4 -4 161 1 4 1285 307 191 95 0 chr15 91801943 91802027 -11692947 + B4A SINE B4 129 220 -72 4 1285 518 79 13 0 chr15 91802113 91802189 -11692785 + (GA)n Simple_repeat Simple_repeat 2 78 0 4 1285 21 36 0 0 chr15 91803156 91803184 -11691790 + AT_rich Low_complexity Low_complexity 1 28 0 4 1285 221 146 0 20 chr15 91804475 91804524 -11690450 + CT-rich Low_complexity Low_complexity 1 48 0 4 1285 1527 229 41 82 chr15 91804608 91805045 -11689929 - MTD LTR MaLR 0 419 1 4 1285 3637 171 127 49 chr15 91806183 91807137 -11687837 + RLTR25B LTR ERVK 1 1028 0 4 1285 879 246 15 15 chr15 91807587 91807793 -11687181 + B3 SINE B2 1 206 -10 4 1285 1004 260 40 100 chr15 91808177 91808578 -11686396 - MTE2b LTR MaLR -2 377 1 4 1285 3383 93 15 2 chr15 91808608 91809070 -11685904 + L1_Mus4 LINE L1 6169 6636 0 4 1285 8183 39 2 2 chr15 91809287 91810552 -11684422 - L1Md_F2 LINE L1 0 6582 5319 4 1285 11851 22 13 0 chr15 91810545 91811923 -11683051 + L1Md_F2 LINE L1 3931 5326 -557 4 1285 1006 123 0 0 chr15 91812235 91812381 -11682593 + B1_Mus2 SINE Alu 2 147 0 4 1285 625 253 7 14 chr15 91812735 91812883 -11682091 + B1_Mur2 SINE Alu 2 148 -1 4 1285 836 94 16 0 chr15 91812889 91813016 -11681958 + (GGGAGA)n Simple_repeat Simple_repeat 4 132 0 4 1285 325 212 62 68 chr15 91813018 91813180 -11681794 - RMER10A LTR ERVL -158 284 124 4 1285 359 288 88 66 chr15 91813245 91813472 -11681502 + RMER5 LTR ERV1 17 248 -286 4 1285 290 117 0 32 chr15 91815148 91815210 -11679764 + (TTC)n Simple_repeat Simple_repeat 3 62 0 4 1285 42062 26 1 7 chr15 91815262 91824524 -11670450 - L1Md_A LINE L1 0 6582 1 4 1285 6166 38 0 15 chr15 91824687 91825432 -11669542 - L1Md_F2 LINE L1 -2 6580 5847 4 1285 1012 204 34 24 chr15 91826086 91826292 -11668682 + B3 SINE B2 5 212 -4 4 1285 407 220 5 58 chr15 91827164 91827243 -11667731 + polypyrimidine Low_complexity Low_complexity 107 180 0 4 1285 1007 123 0 6 chr15 91827243 91827407 -11667567 + (TTTC)n Simple_repeat Simple_repeat 4 166 0 4 1285 407 220 5 58 chr15 91827407 91827515 -11667459 + CT-rich Low_complexity Low_complexity 3 106 0 4 1285 294 106 0 0 chr15 91828710 91828757 -11666217 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1285 782 314 53 32 chr15 91829107 91829482 -11665492 - RMER5 LTR ERV1 0 534 152 4 1285 1636 242 168 20 chr15 91829490 91830140 -11664834 - L1_Mur3 LINE L1 -1379 4501 3756 4 1285 25 0 0 0 chr15 91831834 91831859 -11663115 + AT_rich Low_complexity Low_complexity 1 25 0 4 1285 688 308 55 51 chr15 91832565 91832839 -11662135 + MTE2b LTR MaLR 62 336 -43 4 1285 833 222 39 24 chr15 91832848 91833056 -11661918 - B3 SINE B2 -1 215 5 4 1285 26 0 0 0 chr15 91833481 91833507 -11661467 + AT_rich Low_complexity Low_complexity 1 26 0 4 1285 865 327 27 12 chr15 91833757 91834088 -11660886 - Lx7 LINE L1 -543 7153 6818 4 1285 24 0 0 0 chr15 91834091 91834115 -11660859 + AT_rich Low_complexity Low_complexity 1 24 0 4 1285 30 27 0 0 chr15 91834877 91834914 -11660060 + AT_rich Low_complexity Low_complexity 1 37 0 4 1285 365 303 68 60 chr15 91835141 91835376 -11659598 + LTR33A LTR ERVL 262 498 -22 4 1285 615 92 0 0 chr15 91835708 91835795 -11659179 + (TTCC)n Simple_repeat Simple_repeat 2 88 0 4 1285 2419 96 12 15 chr15 91836106 91836434 -11658540 - ORR1A2 LTR MaLR 0 327 1 4 1285 1947 203 8 18 chr15 91836460 91836851 -11658123 + Lx7 LINE L1 6797 7183 -513 4 1285 1604 242 76 33 chr15 91837140 91837656 -11657318 + Lx7 LINE L1 7157 7694 -2 4 1285 777 198 216 0 chr15 91837668 91837835 -11657139 - B3 SINE B2 -10 206 4 4 1285 1442 150 22 14 chr15 91837899 91838122 -11656852 - URR1B DNA MER1_type 0 225 1 4 1285 201 147 0 0 chr15 91838262 91838296 -11656678 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 4 1285 353 288 16 0 chr15 91838967 91839092 -11655882 + (TA)n Simple_repeat Simple_repeat 1 127 0 4 1285 2067 143 120 11 chr15 91839685 91840053 -11654921 + MTC LTR MaLR 6 413 -8 4 1285 1010 246 23 14 chr15 91840155 91840369 -11654605 + B3 SINE B2 1 216 0 4 1285 3255 66 15 0 chr15 91840820 91841214 -11653760 - L1_Mus1 LINE L1 -1 6566 6167 4 1285 2934 73 18 3 chr15 91841214 91841596 -11653378 + L1Md_F2 LINE L1 5764 6151 -431 4 1285 184 269 48 60 chr15 91842425 91842508 -11652466 - L2c LINE L2 0 3387 3306 4 1285 669 216 53 73 chr15 91843226 91843376 -11651598 - B1_Mur1 SINE Alu 0 149 3 4 1285 1816 210 71 56 chr15 91844093 91844285 -11650689 + Lx7 LINE L1 5951 6150 -1546 4 1285 252 0 0 0 chr15 91844285 91844313 -11650661 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 4 1285 1816 210 71 56 chr15 91844313 91844624 -11650350 + Lx7 LINE L1 6151 6462 -1234 4 1285 1062 195 10 0 chr15 91844650 91844845 -11650129 + Lx7 LINE L1 6767 6963 -733 4 1285 4104 218 57 15 chr15 91844832 91845716 -11649258 - Lx6 LINE L1 -392 7068 6148 4 1285 36319 62 3 3 chr15 91845815 91852018 -11642956 - L1Md_F2 LINE L1 -2 6583 285 4 1285 272 367 0 0 chr15 91852069 91852148 -11642826 - RSINE1 SINE B4 -58 107 29 4 1285 604 274 25 37 chr15 91852352 91852525 -11642449 - B3 SINE B2 -2 214 45 4 1285 241 289 204 34 chr15 91852570 91852717 -11642257 + MT2A LTR ERVL 356 527 -6 4 1285 450 0 0 0 chr15 91852748 91852798 -11642176 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1285 3596 220 73 48 chr15 91853349 91853649 -11641325 - Lx6 LINE L1 -267 7193 6879 4 1285 600 14 0 0 chr15 91853649 91853718 -11641256 + (TC)n Simple_repeat Simple_repeat 2 70 0 4 1285 333 0 0 0 chr15 91853718 91853754 -11641220 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1285 3596 220 73 48 chr15 91853754 91853894 -11641080 - Lx6 LINE L1 -582 6878 6744 4 1285 405 0 0 0 chr15 91853894 91853939 -11641035 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 4 1285 3596 220 73 48 chr15 91853939 91853969 -11641005 - Lx6 LINE L1 -717 6743 6718 4 1285 2328 131 16 0 chr15 91853969 91854290 -11640684 - ORR1A3 LTR MaLR 0 326 1 4 1285 3596 220 73 48 chr15 91854290 91854694 -11640280 - Lx6 LINE L1 -743 6717 6296 4 1285 285 143 0 0 chr15 91858036 91858085 -11636889 + RMER10B LTR ERVL 350 398 0 4 1285 948 281 122 27 chr15 91858800 91859170 -11635804 + MTD LTR MaLR 1 405 -14 4 1285 960 210 5 11 chr15 91859754 91859942 -11635032 + ORR1C2 LTR MaLR 198 384 0 5 1285 594 240 70 62 chr15 91859946 91860204 -11634770 + RLTR42-int LTR ERVK 5263 5522 0 5 1285 252 224 17 0 chr15 91860204 91860262 -11634712 + RLTR42 LTR ERVK 1 59 -180 5 1285 238 245 0 0 chr15 91860220 91860273 -11634701 + MLT1J LTR MaLR 100 152 -360 5 1285 320 282 172 77 chr15 91860311 91860480 -11634494 + RLTR42 LTR ERVK 55 239 0 5 1285 3570 167 30 27 chr15 91860870 91861467 -11633507 - MT2B LTR ERVL 0 601 3 5 1285 805 153 116 6 chr15 91861468 91861632 -11633342 - MERVL_2A-int LTR ERVL 0 5761 5580 5 1285 9851 162 11 6 chr15 91861631 91863212 -11631762 - MERVL_2A-int LTR ERVL -289 5472 3883 5 1285 180 111 0 0 chr15 91863580 91863607 -11631367 + (CATA)n Simple_repeat Simple_repeat 2 28 0 5 1285 265 136 50 17 chr15 91864105 91864165 -11630809 + RLTR19-int LTR ERVK 1124 1185 -4337 5 1285 508 62 0 0 chr15 91864269 91864334 -11630640 - L1Md_F2 LINE L1 -17 6565 6501 5 1285 320 209 50 65 chr15 91864336 91864525 -11630449 - MYSERV6-int LTR ERVK -997 7962 7814 5 1285 429 268 55 59 chr15 91864680 91864882 -11630092 + RLTR19-int LTR ERVK 1134 1334 -1904 5 1285 4969 184 65 110 chr15 91865012 91866591 -11628383 + RLTR19-int LTR ERVK 1895 3676 -2461 5 1285 262 241 0 18 chr15 91866596 91866651 -11628323 - LSU-rRNA_Hsa rRNA rRNA -782 4253 4200 5 1285 342 0 0 0 chr15 91866667 91866705 -11628269 + (CAA)n Simple_repeat Simple_repeat 2 39 0 5 1285 2305 230 54 57 chr15 91866804 91867432 -11627542 + RLTR19-int LTR ERVK 2613 3238 0 5 1285 369 293 61 113 chr15 91867503 91867849 -11627125 + RMER17C LTR ERVK 34 361 -49 5 1285 286 317 23 91 chr15 91869086 91869218 -11625756 - B4 SINE B4 -2 290 168 5 1285 2751 75 23 58 chr15 91869238 91869637 -11625337 + L1_Mus2 LINE L1 6182 6566 0 5 1285 496 296 12 98 chr15 91869665 91869868 -11625106 - B4 SINE B4 -100 192 16 5 1285 708 133 0 0 chr15 91869929 91870049 -11624925 + (TA)n Simple_repeat Simple_repeat 2 121 0 5 1285 1056 145 0 0 chr15 91870063 91870208 -11624766 - B1_Mus2 SINE Alu 0 147 3 5 1285 4315 31 2 2 chr15 91870371 91870850 -11624124 - L1Md_T LINE L1 -1 6581 6103 5 1285 4793 21 0 0 chr15 91870850 91871523 -11623451 + L1Md_A LINE L1 5460 6132 -450 5 1285 495 0 0 0 chr15 91871598 91871653 -11623321 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1285 269 195 269 13 chr15 91871671 91871749 -11623225 - B4A SINE B4 -71 221 124 5 1285 840 20 0 0 chr15 91871808 91871906 -11623068 + (TTCCC)n Simple_repeat Simple_repeat 4 101 0 5 1285 478 182 337 5 chr15 91871980 91872057 -11622917 + Lx9 LINE L1 7386 7479 -165 5 1285 369 0 0 0 chr15 91872057 91872098 -11622876 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1285 478 182 337 5 chr15 91872098 91872213 -11622761 + Lx9 LINE L1 7480 7641 -3 5 1285 855 29 0 0 chr15 91872293 91872395 -11622579 + (GA)n Simple_repeat Simple_repeat 1 102 0 5 1285 374 324 18 18 chr15 91872549 91872659 -11622315 - PB1D10 SINE Alu -7 110 1 5 1285 422 207 15 0 chr15 91873554 91873647 -11621327 + MTC LTR MaLR 1 97 -322 5 1285 1494 39 0 0 chr15 91873668 91873925 -11621049 + (TG)n Simple_repeat Simple_repeat 1 257 0 5 1285 1130 194 100 30 chr15 91873932 91874273 -11620701 - RMER16 LTR ERVK 0 533 1 5 1285 30 0 0 0 chr15 91874298 91874328 -11620646 + AT_rich Low_complexity Low_complexity 1 30 0 5 1285 1522 189 21 11 chr15 91874331 91874614 -11620360 + MTC LTR MaLR 116 401 -20 5 1285 323 267 9 71 chr15 91874698 91874811 -11620163 - MLT1A1 LTR MaLR -3 405 300 5 1285 686 265 98 76 chr15 91876446 91876855 -11618119 - MLT1D LTR MaLR -44 461 44 5 1285 324 149 103 15 chr15 91877019 91877087 -11617887 + URR1B DNA MER1_type 152 225 0 5 1285 1190 291 81 0 chr15 91877262 91877606 -11617368 + MTE2b LTR MaLR 1 372 -7 5 1286 530 332 43 30 chr15 91884022 91884104 -11610870 + MTD LTR MaLR 3 81 -338 5 1286 3236 62 36 3 chr15 91884104 91884491 -11610483 - MTB LTR MaLR 0 400 1 5 1286 530 332 43 30 chr15 91884491 91884638 -11610336 + MTD LTR MaLR 82 235 -184 5 1286 191 116 56 28 chr15 91884681 91884752 -11610222 + (CAAA)n Simple_repeat Simple_repeat 1 73 0 5 1286 193 368 0 0 chr15 91885837 91885905 -11609069 + MIRb SINE MIR 193 260 -8 5 1286 938 103 0 7 chr15 91886575 91886721 -11608253 + (TTCC)n Simple_repeat Simple_repeat 4 148 0 5 1286 396 0 0 0 chr15 91886721 91886765 -11608209 + (TC)n Simple_repeat Simple_repeat 2 45 0 5 1286 501 245 47 0 chr15 91886804 91886910 -11608064 - B1_Mur1 SINE Alu -32 117 7 5 1286 268 299 80 45 chr15 91886819 91886931 -11608043 - B4 SINE B4 -104 188 73 5 1286 484 281 37 7 chr15 91887575 91887711 -11607263 - B1F SINE Alu -9 140 1 5 1286 1768 140 95 3 chr15 91888455 91888791 -11606183 + ORR1B2 LTR MaLR 1 367 0 5 1286 288 114 0 0 chr15 91889973 91890017 -11604957 + Lx9 LINE L1 7310 7353 -291 5 1286 399 41 0 0 chr15 91890031 91890080 -11604894 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1286 360 0 0 0 chr15 91890080 91890119 -11604855 + (GA)n Simple_repeat Simple_repeat 1 40 0 5 1286 688 139 162 0 chr15 91890119 91890292 -11604682 + Lx9 LINE L1 7437 7637 -7 5 1286 295 281 135 0 chr15 91891115 91891204 -11603770 - B4 SINE B4 -11 281 181 5 1286 26 0 0 0 chr15 91891466 91891492 -11603482 + AT_rich Low_complexity Low_complexity 1 26 0 5 1286 597 221 5 64 chr15 91891966 91892154 -11602820 - Lx7 LINE L1 0 7696 7520 5 1286 4780 211 31 39 chr15 91892180 91893341 -11601633 - Lx7 LINE L1 -344 7352 6201 5 1286 5447 170 44 48 chr15 91893339 91895003 -11599971 - L1_Mur3 LINE L1 -3319 2561 902 5 1286 261 0 0 0 chr15 91895155 91895184 -11599790 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 1286 955 219 246 6 chr15 91895363 91895693 -11599281 + MTD LTR MaLR 10 418 -1 5 1286 204 125 0 0 chr15 91895841 91895873 -11599101 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 5 1286 180 0 0 0 chr15 91895895 91895915 -11599059 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 1286 596 316 0 0 chr15 91895916 91896074 -11598900 - RSINE1 SINE B4 -5 160 3 5 1286 210 37 0 0 chr15 91896108 91896135 -11598839 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1286 237 265 98 17 chr15 91896141 91896314 -11598660 - L1M5 LINE L1 -1703 4443 4257 5 1286 267 230 67 22 chr15 91896954 91897043 -11597931 + MTE2a LTR MaLR 14 106 -313 5 1286 498 79 0 0 chr15 91897062 91897138 -11597836 + (CA)n Simple_repeat Simple_repeat 2 77 0 5 1286 456 19 0 0 chr15 91897139 91897192 -11597782 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 5 1286 393 103 0 0 chr15 91897194 91897262 -11597712 + (TC)n Simple_repeat Simple_repeat 2 69 0 5 1286 360 0 0 0 chr15 91897264 91897304 -11597670 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1286 1595 235 23 2 chr15 91897304 91897719 -11597255 - MT2A LTR ERVL -74 459 1 5 1286 885 250 29 73 chr15 91897721 91897993 -11596981 + MTE2a LTR MaLR 116 375 -4 5 1286 312 246 136 24 chr15 91898008 91898133 -11596841 - L1M5 LINE L1 -2716 3430 3292 5 1286 40 21 0 0 chr15 91898174 91898221 -11596753 + AT_rich Low_complexity Low_complexity 1 47 0 5 1286 225 0 0 0 chr15 91898410 91898435 -11596539 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1286 1978 221 141 58 chr15 91898532 91899096 -11595878 + RMER1B Other Other 9 956 -110 5 1286 276 30 0 0 chr15 91899096 91899129 -11595845 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 5 1286 1978 218 148 57 chr15 91899129 91899242 -11595732 + RMER1B Other Other 957 1063 -3 5 1286 424 263 93 43 chr15 91899452 91899554 -11595420 - MTE2a LTR MaLR -67 312 202 5 1286 567 43 0 0 chr15 91899554 91899624 -11595350 + (GA)n Simple_repeat Simple_repeat 1 70 0 5 1286 424 263 93 43 chr15 91899624 91899660 -11595314 - MTE2a LTR MaLR -178 201 167 5 1286 279 263 243 15 chr15 91899713 91899972 -11595002 - Lx9 LINE L1 -10 7634 7317 5 1286 7222 163 34 10 chr15 91899957 91902065 -11592909 - Lx2B LINE L1 -290 6710 4534 5 1286 4404 142 29 9 chr15 91902063 91902912 -11592062 + L1_Mur1 LINE L1 2780 3645 -2241 5 1286 26 50 0 0 chr15 91903114 91903154 -11591820 + AT_rich Low_complexity Low_complexity 1 40 0 5 1286 21 0 0 0 chr15 91904716 91904737 -11590237 + AT_rich Low_complexity Low_complexity 1 21 0 5 1286 1030 224 5 19 chr15 91905154 91905368 -11589606 - B3 SINE B2 -4 212 2 5 1286 208 313 174 0 chr15 91906216 91906331 -11588643 - MER5A DNA MER1_type -2 187 53 5 1286 526 230 43 14 chr15 91906495 91906636 -11588338 + B1F SINE Alu 5 149 0 5 1286 902 142 35 0 chr15 91907738 91907879 -11587095 - B1_Mur4 SINE Alu -3 147 2 5 1286 599 315 41 64 chr15 91908314 91908609 -11586365 - B4 SINE B4 -4 288 1 5 1286 564 84 0 0 chr15 91909213 91909296 -11585678 + (TG)n Simple_repeat Simple_repeat 2 84 0 5 1286 611 60 66 15 chr15 91911665 91911801 -11583173 + (TCTA)n Simple_repeat Simple_repeat 4 146 0 5 1286 454 320 45 0 chr15 91912280 91912458 -11582516 + B3A SINE B2 2 187 -11 5 1286 252 0 0 0 chr15 91912628 91912656 -11582318 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 5 1286 28 0 0 0 chr15 91912756 91912784 -11582190 + AT_rich Low_complexity Low_complexity 1 28 0 5 1286 483 226 78 31 chr15 91914902 91915030 -11579944 - B1_Mur1 SINE Alu -13 136 3 5 1286 354 269 133 9 chr15 91915030 91915135 -11579839 + B1_Mur3 SINE Alu 26 143 -6 5 1286 453 154 0 0 chr15 91915427 91915518 -11579456 + (CA)n Simple_repeat Simple_repeat 2 92 0 5 1286 508 327 58 10 chr15 91918897 91919083 -11575891 - ID_B1 SINE B4 0 292 85 5 1286 607 245 81 6 chr15 91920199 91920359 -11574615 - RMER5 LTR ERV1 -17 517 346 5 1286 369 0 0 0 chr15 91920918 91920959 -11574015 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1286 636 249 178 17 chr15 91920959 91921314 -11573660 - Lx9 LINE L1 -181 7463 7052 5 1286 181 322 200 14 chr15 91923881 91924026 -11570948 + MIRb SINE MIR 69 240 -28 5 1286 2055 306 45 20 chr15 91924521 91926134 -11568840 - Lx9 LINE L1 -437 7207 5382 5 1286 2532 247 59 43 chr15 91926150 91927072 -11567902 + L1_Rod LINE L1 3853 4788 -1059 5 1286 1167 170 16 29 chr15 91927074 91927318 -11567656 - RMER19C LTR ERVK -238 664 384 5 1286 401 298 29 0 chr15 91927945 91928049 -11566925 + PB1D7 SINE Alu 3 109 -11 5 1286 193 380 88 0 chr15 91928296 91928433 -11566541 - L2 LINE L2 -1331 2088 1940 5 1286 512 250 36 7 chr15 91928578 91928715 -11566259 + B1F1 SINE Alu 1 141 -8 5 1286 4249 34 4 0 chr15 91928949 91929447 -11565527 + L1Md_F2 LINE L1 6081 6580 -2 5 1286 25 90 0 0 chr15 91930171 91930238 -11564736 + AT_rich Low_complexity Low_complexity 1 67 0 5 1286 486 295 170 38 chr15 91931644 91931961 -11563013 - ORR1E LTR MaLR 0 359 1 5 1286 753 106 0 0 chr15 91932336 91932449 -11562525 + (GGAA)n Simple_repeat Simple_repeat 3 115 0 5 1286 499 283 14 28 chr15 91933008 91933150 -11561824 + B1F SINE Alu 9 148 -1 6 1286 988 281 70 22 chr15 91933158 91933431 -11561543 + B4A SINE B4 7 292 0 6 1286 344 323 81 40 chr15 91933755 91933929 -11561045 - L1MC3 LINE L1 -1000 6785 6605 6 1286 423 0 0 0 chr15 91935470 91935517 -11559457 + (TTTTA)n Simple_repeat Simple_repeat 2 48 0 6 1286 216 133 0 43 chr15 91935632 91935679 -11559295 + T-rich Low_complexity Low_complexity 2 46 0 6 1286 3015 67 21 3 chr15 91935982 91936371 -11558603 - MTB LTR MaLR 0 400 5 6 1286 201 175 0 0 chr15 91937938 91937978 -11556996 + (ATG)n Simple_repeat Simple_repeat 2 41 0 6 1286 763 267 19 0 chr15 91938866 91938992 -11555982 + B3 SINE B2 1 130 -86 6 1286 285 29 0 0 chr15 91938992 91939026 -11555948 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 1286 763 267 19 0 chr15 91939026 91939105 -11555869 + B3 SINE B2 131 209 -7 6 1286 1468 154 0 8 chr15 91939391 91939626 -11555348 + ORR1B2 LTR MaLR 1 233 -134 6 1286 207 0 0 0 chr15 91939627 91939650 -11555324 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1286 545 273 93 6 chr15 91939660 91939822 -11555152 - B3 SINE B2 -37 179 4 6 1286 2770 125 40 38 chr15 91940012 91940486 -11554488 - MT2C_Mm LTR ERVL 0 475 1 6 1286 2234 106 48 0 chr15 91940503 91940815 -11554159 - ORR1A2 LTR MaLR 0 327 1 6 1286 259 318 74 28 chr15 91940951 91941168 -11553806 - L2 LINE L2 -1211 2208 1982 6 1286 234 175 25 0 chr15 91941275 91941315 -11553659 - URR1B DNA MER1_type -184 41 1 6 1286 228 204 20 0 chr15 91941689 91941738 -11553236 + B3A SINE B2 1 50 -148 6 1286 221 83 28 0 chr15 91941776 91941812 -11553162 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1286 443 118 0 13 chr15 91941813 91941890 -11553084 + (GA)n Simple_repeat Simple_repeat 1 76 0 6 1286 31 0 0 0 chr15 91941946 91941977 -11552997 + AT_rich Low_complexity Low_complexity 1 31 0 6 1286 21 36 0 0 chr15 91942274 91942302 -11552672 + AT_rich Low_complexity Low_complexity 1 28 0 6 1286 747 170 22 29 chr15 91943563 91943702 -11551272 + B1_Mur1 SINE Alu 11 148 -1 6 1286 1766 93 8 11 chr15 91944833 91945095 -11549879 + L1Md_F2 LINE L1 6321 6581 -1 6 1286 771 312 75 60 chr15 91946828 91947230 -11547744 - MT2A LTR ERVL -1 532 125 6 1286 195 42 0 0 chr15 91948110 91948134 -11546840 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1286 254 167 0 45 chr15 91948136 91948224 -11546750 + (TA)n Simple_repeat Simple_repeat 1 84 0 6 1286 609 286 212 11 chr15 91948574 91948927 -11546047 + Lx8 LINE L1 6599 7022 -451 6 1286 541 351 29 13 chr15 91949051 91949363 -11545611 + Lx8 LINE L1 7041 7357 -116 6 1286 24 32 0 0 chr15 91949483 91949514 -11545460 + AT_rich Low_complexity Low_complexity 1 31 0 6 1286 248 322 105 24 chr15 91949787 91949911 -11545063 + RLTR14 LTR ERV1 224 357 -25 6 1286 1206 264 55 103 chr15 91950247 91950644 -11544330 + MTE2b LTR MaLR 2 379 0 6 1286 360 0 0 0 chr15 91951167 91951207 -11543767 + (TTTTA)n Simple_repeat Simple_repeat 4 43 0 6 1286 706 359 12 12 chr15 91952052 91952303 -11542671 + Tigger7 DNA MER2_type 187 437 -2054 6 1286 203 55 88 35 chr15 91952311 91952368 -11542606 + A-rich Low_complexity Low_complexity 4 63 0 6 1286 233 167 42 53 chr15 91952821 91952916 -11542058 + A-rich Low_complexity Low_complexity 3 96 0 6 1286 25 0 0 0 chr15 91953725 91953750 -11541224 + AT_rich Low_complexity Low_complexity 1 25 0 6 1286 737 98 0 9 chr15 91953783 91953896 -11541078 + (GAA)n Simple_repeat Simple_repeat 3 114 0 6 1286 375 78 0 0 chr15 91953896 91953947 -11541027 + (CAA)n Simple_repeat Simple_repeat 1 51 0 6 1286 415 281 0 37 chr15 91953996 91954103 -11540871 - RSINE1 SINE B4 -61 104 2 6 1286 755 294 0 0 chr15 91954572 91954759 -11540215 + B3A SINE B2 2 188 -10 6 1286 189 107 0 0 chr15 91955527 91955555 -11539419 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 6 1286 234 0 0 0 chr15 91957405 91957431 -11537543 + (TATG)n Simple_repeat Simple_repeat 2 27 0 6 1286 384 333 86 60 chr15 91958695 91958963 -11536011 + B4A SINE B4 8 282 -10 6 1286 402 94 0 0 chr15 91958998 91959062 -11535912 + (CA)n Simple_repeat Simple_repeat 2 65 0 6 1286 290 207 0 24 chr15 91959684 91959768 -11535206 + (TATG)n Simple_repeat Simple_repeat 4 85 0 6 1286 396 303 147 35 chr15 91960028 91960527 -11534447 - MLT1E3 LTR MaLR -547 942 224 6 1286 683 105 0 26 chr15 91960590 91960707 -11534267 + Lx2 LINE L1 6884 6997 0 6 1286 240 236 0 0 chr15 91964011 91964066 -11530908 + ORR1C1 LTR MaLR 1 55 -323 6 1286 324 0 0 0 chr15 91966010 91966046 -11528928 + (TA)n Simple_repeat Simple_repeat 1 36 0 6 1286 1202 207 107 144 chr15 91966127 91966584 -11528390 + RLTR20B3 LTR ERVK 9 448 -129 6 1286 24 0 0 0 chr15 91966636 91966660 -11528314 + AT_rich Low_complexity Low_complexity 1 24 0 6 1286 959 145 90 6 chr15 91967107 91967274 -11527700 + URR1B DNA MER1_type 45 225 0 6 1286 1007 34 27 0 chr15 91968143 91968291 -11526683 + (TA)n Simple_repeat Simple_repeat 2 153 0 6 1286 289 227 136 98 chr15 91968323 91968455 -11526519 + MT2B LTR ERVL 120 256 -345 6 1286 481 263 26 17 chr15 91968359 91968475 -11526499 + B1_Mur3 SINE Alu 7 123 -26 6 1286 219 36 0 0 chr15 91968489 91968517 -11526457 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 6 1286 564 309 127 19 chr15 91968767 91969074 -11525900 + MLT2C1 LTR ERVL 8 347 -50 6 1286 277 355 45 9 chr15 91969179 91969290 -11525684 + PB1 SINE Alu 9 123 -4 6 1286 1122 93 0 0 chr15 91969392 91969631 -11525343 + (TG)n Simple_repeat Simple_repeat 1 239 0 6 1286 25 31 0 0 chr15 91969722 91969754 -11525220 + AT_rich Low_complexity Low_complexity 1 32 0 6 1286 584 226 58 14 chr15 91972240 91972379 -11522595 - B1_Mur1 SINE Alu -1 148 4 6 1286 225 302 50 8 chr15 91972469 91972589 -11522385 + L1MEf LINE L1 1426 1550 -4650 6 1286 22 35 0 0 chr15 91972711 91972740 -11522234 + AT_rich Low_complexity Low_complexity 1 29 0 6 1286 378 0 0 0 chr15 91973074 91973116 -11521858 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 6 1286 244 380 130 21 chr15 91974036 91974367 -11520607 - L2 LINE L2 -427 2992 2626 6 1286 237 319 197 0 chr15 91974410 91974598 -11520376 - L2 LINE L2 -882 2537 2313 6 1286 217 333 59 50 chr15 91974720 91974821 -11520153 - L2 LINE L2 -993 2426 2325 6 1286 1644 254 22 19 chr15 91975374 91975735 -11519239 - MTD LTR MaLR -14 405 44 6 1286 3882 252 73 50 chr15 91975763 91976981 -11517993 - MTD-int LTR MaLR 0 1258 13 6 1286 1307 217 111 16 chr15 91976982 91977327 -11517647 - MTD LTR MaLR 0 419 16 6 1286 6467 31 4 4 chr15 91978369 91979143 -11515831 - L1Md_F3 LINE L1 -2 6582 5809 6 1286 1055 126 0 6 chr15 91979481 91979641 -11515333 + B2_Mm2 SINE B2 2 160 -35 6 1286 432 0 0 0 chr15 91979643 91979691 -11515283 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 6 1286 1885 161 111 9 chr15 91979961 91980294 -11514680 - ORR1B2 LTR MaLR 0 367 1 6 1286 21 0 0 0 chr15 91981531 91981552 -11513422 + AT_rich Low_complexity Low_complexity 1 21 0 6 1286 245 265 161 15 chr15 91981891 91982090 -11512884 - L1M4c LINE L1 -3761 2618 2391 6 1286 510 302 106 26 chr15 91982577 91983453 -11511521 - L1M4c LINE L1 -4525 1788 1166 6 1286 837 196 7 7 chr15 91983474 91983623 -11511351 + B1_Mur2 SINE Alu 1 149 0 6 1286 2462 124 12 26 chr15 91983958 91984373 -11510601 - RLTR9E LTR ERVK 0 409 1 6 1286 693 312 0 23 chr15 91986012 91986232 -11508742 - B3 SINE B2 0 216 2 6 1286 243 215 0 0 chr15 91986324 91986389 -11508585 + (TTG)n Simple_repeat Simple_repeat 2 66 0 6 1286 21 57 0 0 chr15 91988636 91988671 -11506303 + AT_rich Low_complexity Low_complexity 1 35 0 6 1286 23 33 0 0 chr15 91988898 91988928 -11506046 + AT_rich Low_complexity Low_complexity 1 30 0 6 1286 543 300 46 26 chr15 91989815 91990010 -11504964 - B3 SINE B2 -11 205 7 6 1286 26 30 0 0 chr15 91990217 91990250 -11504724 + AT_rich Low_complexity Low_complexity 1 33 0 6 1286 34 0 0 0 chr15 91992539 91992573 -11502401 + AT_rich Low_complexity Low_complexity 1 34 0 6 1286 308 64 0 21 chr15 91994641 91994689 -11500285 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1286 418 286 28 35 chr15 91994692 91994837 -11500137 - B3A SINE B2 -54 144 1 6 1286 362 167 226 0 chr15 91994866 91994950 -11500024 + PB1D9 SINE Alu 7 109 -11 6 1286 212 0 36 0 chr15 91994952 91994980 -11499994 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1286 323 325 112 0 chr15 91995632 91995820 -11499154 + MER74A LTR ERVL 126 334 -224 6 1286 360 235 0 0 chr15 91998155 91998270 -11496704 + (TG)n Simple_repeat Simple_repeat 1 115 0 6 1286 251 386 48 7 chr15 91998287 91998433 -11496541 - RSINE1 SINE B4 -9 156 5 6 1286 22 56 0 0 chr15 91999336 91999372 -11495602 + AT_rich Low_complexity Low_complexity 1 36 0 6 1286 288 238 0 31 chr15 91999520 91999585 -11495389 + L2a LINE L2 3355 3417 -9 6 1286 24 0 0 0 chr15 92000056 92000080 -11494894 + AT_rich Low_complexity Low_complexity 1 24 0 1 1286 1509 209 16 20 chr15 92000187 92000525 -11494449 + MT2A LTR ERVL 1 488 -113 2 1286 1597 37 0 16 chr15 92000764 92000958 -11494016 - B2_Mm1t SINE B2 -2 191 1 3 1286 343 292 98 15 chr15 92001181 92001313 -11493661 + B1F SINE Alu 7 149 0 4 1286 267 251 30 24 chr15 92001747 92001841 -11493133 - B1_Mus1 SINE Alu -31 89 1 5 1286 1177 62 0 0 chr15 92002885 92003030 -11491944 + B1_Mus2 SINE Alu 1 145 -2 6 1286 315 0 0 0 chr15 92003030 92003065 -11491909 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 7 1286 341 313 66 24 chr15 92004470 92004637 -11490337 - L2b LINE L2 -1 3374 3201 8 1286 401 324 104 59 chr15 92004787 92005144 -11489830 - MTEa LTR MaLR 0 379 7 9 1286 510 261 74 41 chr15 92005135 92005406 -11489568 - Charlie2b DNA MER1_type -25 2757 2478 1 1286 226 354 36 41 chr15 92005532 92005753 -11489221 - Charlie2b DNA MER1_type -515 2267 2048 1 1286 22 56 0 0 chr15 92006756 92006792 -11488182 + AT_rich Low_complexity Low_complexity 1 36 0 1 1286 938 283 24 49 chr15 92006852 92006878 -11488096 - L1_Mur3 LINE L1 -6389 1323 1298 1 1286 180 0 0 0 chr15 92006878 92006898 -11488076 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 1286 938 283 24 49 chr15 92006898 92007380 -11487594 - L1_Mur3 LINE L1 -6415 1297 829 1 1286 322 298 26 0 chr15 92007625 92007739 -11487235 - L1_Mur3 LINE L1 -6898 814 698 1 1286 4342 170 51 49 chr15 92007746 92008645 -11486329 - RMER19B LTR ERVK -1 901 1 1 1286 558 209 38 6 chr15 92008698 92008857 -11486117 + L1_Mur3 LINE L1 4180 4343 -1537 1 1286 269 64 0 41 chr15 92008861 92008910 -11486064 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 1 1286 1093 109 0 0 chr15 92008969 92009116 -11485858 + B1_Mus1 SINE Alu 2 148 0 1 1286 224 300 71 0 chr15 92009144 92009214 -11485760 - RSINE1 SINE B4 -47 118 44 1 1286 1014 181 70 16 chr15 92009223 92009481 -11485493 + L1_Mur3 LINE L1 4444 4715 -1165 1 1286 199 296 45 0 chr15 92011585 92011673 -11483301 - MIR SINE MIR -45 217 126 1 1286 25 0 0 0 chr15 92012188 92012213 -11482761 + AT_rich Low_complexity Low_complexity 1 25 0 2 1287 562 373 5 16 chr15 92013620 92013993 -11480981 - MERVL_2A-int LTR ERVL -3748 2013 1645 2 1287 845 315 65 12 chr15 92014094 92014733 -11480241 - MERVL_2A-int LTR ERVL -5014 747 7 2 1287 530 319 77 73 chr15 92014738 92015269 -11479705 - MT2A LTR ERVL 0 533 1 2 1287 241 93 18 18 chr15 92015892 92015947 -11479027 + (CAAAAA)n Simple_repeat Simple_repeat 1 55 0 2 1287 216 0 0 0 chr15 92016082 92016106 -11478868 + (CCCTAA)n Simple_repeat Simple_repeat 5 28 0 2 1287 983 173 43 123 chr15 92017115 92017465 -11477509 - RLTRETN_Mm LTR ERVK 0 322 1 2 1287 206 75 18 70 chr15 92018405 92018462 -11476512 + T-rich Low_complexity Low_complexity 1 54 0 2 1287 1408 245 46 33 chr15 92019428 92019816 -11475158 - Lx5 LINE L1 -17 7033 6646 2 1287 257 0 0 29 chr15 92019836 92019870 -11475104 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2 1287 597 183 15 15 chr15 92019894 92020027 -11474947 - Lx9 LINE L1 -526 7118 6986 2 1287 213 121 0 0 chr15 92020244 92020277 -11474697 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 2 1287 227 208 0 20 chr15 92021119 92021168 -11473806 + MER5B DNA MER1_type 122 169 -9 3 1287 533 209 54 108 chr15 92021651 92021817 -11473157 - B3A SINE B2 0 216 60 3 1287 1319 203 16 0 chr15 92021876 92022127 -11472847 + Lx5 LINE L1 6793 7047 -3 3 1287 25 51 0 0 chr15 92022342 92022381 -11472593 + AT_rich Low_complexity Low_complexity 1 39 0 3 1287 229 304 0 65 chr15 92022711 92022834 -11472140 - PB1D10 SINE Alu 0 117 3 3 1287 318 224 0 0 chr15 92023216 92023301 -11471673 + (TA)n Simple_repeat Simple_repeat 2 86 0 3 1287 208 239 28 14 chr15 92023331 92023403 -11471571 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 3 1287 389 303 113 51 chr15 92023413 92023688 -11471286 - B4A SINE B4 0 292 1 3 1287 3543 158 26 17 chr15 92024064 92024824 -11470150 - L1_Mur3 LINE L1 -2990 2890 2124 3 1287 1184 62 0 14 chr15 92024924 92025061 -11469913 + B1_Mm SINE Alu 2 138 -9 3 1287 279 0 0 0 chr15 92025061 92025092 -11469882 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1287 738 201 14 0 chr15 92025880 92026019 -11468955 + B1_Mus1 SINE Alu 3 143 -5 4 1287 315 0 0 0 chr15 92026047 92026082 -11468892 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 1287 369 325 58 82 chr15 92026101 92026121 -11468853 - B4 SINE B4 0 292 277 4 1287 408 20 0 0 chr15 92026121 92026170 -11468804 + (CATAC)n Simple_repeat Simple_repeat 1 49 0 4 1287 369 325 58 82 chr15 92026170 92026320 -11468654 - B4 SINE B4 -16 276 126 4 1287 216 338 0 29 chr15 92026333 92026403 -11468571 - B4A SINE B4 -215 77 10 4 1287 1101 73 0 0 chr15 92026645 92026781 -11468193 + B1_Mus1 SINE Alu 1 136 -12 4 1287 675 37 0 0 chr15 92026782 92026864 -11468110 + (GA)n Simple_repeat Simple_repeat 1 82 0 4 1287 900 268 36 0 chr15 92026922 92027116 -11467858 - B3 SINE B2 -13 203 3 4 1287 349 281 0 0 chr15 92028473 92028587 -11466387 + (ATG)n Simple_repeat Simple_repeat 1 114 0 4 1287 2835 233 13 32 chr15 92029451 92030199 -11464775 + Lx9 LINE L1 6698 7431 -213 4 1287 488 16 0 16 chr15 92030403 92030465 -11464509 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 1287 437 89 0 15 chr15 92031500 92031568 -11463406 + (TCCC)n Simple_repeat Simple_repeat 1 67 0 5 1287 262 161 31 31 chr15 92031571 92031635 -11463339 + (TCTG)n Simple_repeat Simple_repeat 2 65 0 5 1287 668 288 0 0 chr15 92031639 92031778 -11463196 - B1_Mur3 SINE Alu -10 139 1 5 1287 1103 22 7 0 chr15 92033310 92033449 -11461525 - L1Md_F3 LINE L1 -18 6566 6427 5 1287 1290 295 43 19 chr15 92034835 92035526 -11459448 - L1_Mur3 LINE L1 -1545 4335 3628 5 1287 960 108 0 0 chr15 92035569 92035797 -11459177 + (TC)n Simple_repeat Simple_repeat 1 228 0 5 1287 348 275 36 30 chr15 92036109 92036274 -11458700 - L1M2 LINE L1 -3087 3056 2891 5 1287 189 147 28 56 chr15 92036356 92036428 -11458546 + T-rich Low_complexity Low_complexity 2 71 0 5 1287 1227 293 67 44 chr15 92036479 92037507 -11457467 - L1_Rod LINE L1 -3130 2717 1662 5 1287 396 0 0 0 chr15 92037507 92037551 -11457423 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1287 1227 293 67 44 chr15 92037551 92037594 -11457380 - L1_Rod LINE L1 -4186 1661 1622 5 1287 638 276 73 8 chr15 92037894 92038128 -11456846 - RCHARR1 DNA MER1_type -450 524 276 6 1287 220 205 0 0 chr15 92040191 92040230 -11454744 + (TTG)n Simple_repeat Simple_repeat 2 40 0 6 1287 753 276 29 19 chr15 92043272 92043479 -11451495 - B3 SINE B2 -1 215 7 6 1287 288 258 0 0 chr15 92044029 92044126 -11450848 + (CA)n Simple_repeat Simple_repeat 2 98 0 6 1287 770 275 50 60 chr15 92044143 92044470 -11450504 - MTE2a LTR MaLR -73 346 6 6 1287 987 177 193 0 chr15 92044720 92044901 -11450073 - B3 SINE B2 0 216 1 6 1287 396 351 13 7 chr15 92045740 92045889 -11449085 + Arthur1B DNA Tip100 1 150 -1075 6 1287 26 0 0 0 chr15 92047034 92047060 -11447914 + AT_rich Low_complexity Low_complexity 1 26 0 6 1287 382 317 67 51 chr15 92047197 92047450 -11447524 - MER63D DNA AcHobo -804 257 1 6 1287 1263 50 11 17 chr15 92047619 92047800 -11447174 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 7 1287 414 100 0 0 chr15 92047822 92047882 -11447092 + (TTTC)n Simple_repeat Simple_repeat 3 62 0 7 1287 474 252 63 0 chr15 92048086 92048213 -11446761 - B1F SINE Alu -2 147 13 7 1287 420 296 21 36 chr15 92048705 92048898 -11446076 - Lx5 LINE L1 -384 6666 6477 7 1287 1805 264 54 118 chr15 92048887 92049299 -11445675 - Lx6 LINE L1 -726 6734 6076 7 1287 639 65 0 0 chr15 92049299 92049392 -11445582 + (TC)n Simple_repeat Simple_repeat 1 93 0 7 1287 279 0 0 0 chr15 92049392 92049422 -11445552 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 1287 1805 208 54 104 chr15 92049422 92050010 -11444964 - Lx6 LINE L1 -932 6118 5557 7 1287 799 267 104 26 chr15 92050009 92050355 -11444619 + Lx6 LINE L1 7058 7430 -30 7 1287 543 69 0 0 chr15 92050931 92051003 -11443971 + (TATG)n Simple_repeat Simple_repeat 3 74 0 7 1287 600 27 0 0 chr15 92051141 92051215 -11443759 + (CA)n Simple_repeat Simple_repeat 2 75 0 7 1287 1320 157 83 0 chr15 92051277 92051519 -11443455 + Lx2B LINE L1 6729 6990 -10 8 1287 1030 88 6 6 chr15 92052358 92052519 -11442455 + (GAAA)n Simple_repeat Simple_repeat 2 162 0 8 1287 256 299 73 18 chr15 92052675 92052784 -11442190 - MLT1B LTR MaLR -1 389 275 8 1287 320 364 130 19 chr15 92053038 92053453 -11441521 + L2 LINE L2 1321 1781 -1638 8 1287 622 203 62 15 chr15 92053472 92053602 -11441372 + B1_Mur2 SINE Alu 12 147 -2 8 1287 360 0 0 0 chr15 92053604 92053644 -11441330 + (TAA)n Simple_repeat Simple_repeat 2 41 0 8 1287 231 204 0 0 chr15 92053883 92053932 -11441042 + CT-rich Low_complexity Low_complexity 1 49 0 8 1287 24 0 0 0 chr15 92054979 92055003 -11439971 + AT_rich Low_complexity Low_complexity 1 24 0 8 1287 412 156 11 11 chr15 92055765 92055856 -11439118 + (TA)n Simple_repeat Simple_repeat 2 92 0 8 1287 4006 203 26 8 chr15 92055994 92056861 -11438113 + Lx7 LINE L1 6227 7109 -587 8 1287 2453 90 14 11 chr15 92056885 92057232 -11437742 - Lx LINE L1 -14 6640 6293 9 1287 1127 206 54 147 chr15 92057232 92057716 -11437258 + Lx7 LINE L1 7257 7695 -1 8 1287 319 286 65 19 chr15 92057742 92057849 -11437125 + PB1D10 SINE Alu 6 117 0 9 1287 1113 118 0 0 chr15 92058659 92058911 -11436063 + (TG)n Simple_repeat Simple_repeat 1 252 0 9 1287 408 218 13 0 chr15 92059651 92059729 -11435245 - ID4_ SINE ID -1 82 4 9 1287 720 257 11 39 chr15 92062860 92063042 -11431932 + B3A SINE B2 5 181 -17 9 1287 263 192 14 0 chr15 92063067 92063140 -11431834 + (CA)n Simple_repeat Simple_repeat 2 75 0 9 1287 600 14 0 0 chr15 92064533 92064602 -11430372 + (TA)n Simple_repeat Simple_repeat 1 69 0 9 1287 542 265 104 36 chr15 92065085 92065277 -11429697 - RMER15 LTR ERVL 0 575 371 9 1287 287 299 147 35 chr15 92065284 92065454 -11429520 - Lx8 LINE L1 -251 7222 7034 9 1287 1069 176 36 27 chr15 92066910 92067132 -11427842 + URR1A DNA MER1_type 3 226 0 9 1287 429 20 0 0 chr15 92067944 92067994 -11426980 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 1287 252 0 0 0 chr15 92067994 92068021 -11426953 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1287 186 43 0 0 chr15 92068021 92068043 -11426931 + (GA)n Simple_repeat Simple_repeat 2 24 0 1 1287 252 0 0 0 chr15 92071066 92071094 -11423880 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 1287 1723 266 15 36 chr15 92071110 92071696 -11423278 - Lx7 LINE L1 -384 7312 6739 1 1287 1772 172 3 13 chr15 92071702 92072003 -11422971 - MTC LTR MaLR 0 421 124 1 1287 1235 54 0 0 chr15 92072082 92072229 -11422745 - B1_Mus2 SINE Alu 0 147 1 1 1287 217 344 40 30 chr15 92072943 92073042 -11421932 + MIRb SINE MIR 17 116 -152 1 1287 534 70 0 0 chr15 92074012 92074083 -11420891 + (T)n Simple_repeat Simple_repeat 1 71 0 1 1287 212 246 0 44 chr15 92075808 92075876 -11419098 + CT-rich Low_complexity Low_complexity 3 67 0 1 1287 361 323 21 0 chr15 92076891 92076987 -11417987 - MER5A DNA MER1_type -1 188 91 1 1287 306 125 0 0 chr15 92077010 92077058 -11417916 + (TTTTC)n Simple_repeat Simple_repeat 2 49 0 1 1287 1049 61 46 0 chr15 92077084 92077215 -11417759 - B1_Mus2 SINE Alu -9 138 2 1 1287 668 299 19 38 chr15 92077429 92077638 -11417336 - B3 SINE B2 -11 205 1 1 1287 581 203 0 8 chr15 92077754 92077873 -11417101 - B1F2 SINE Alu 0 149 32 1 1287 269 311 91 20 chr15 92077987 92078184 -11416790 + L2 LINE L2 1931 2141 -1278 1 1287 2827 107 24 2 chr15 92078602 92079071 -11415903 - Lx3_Mus LINE L1 -537 6472 5994 1 1287 3845 71 13 11 chr15 92079074 92079602 -11415372 + Lx3_Mus LINE L1 6481 7009 0 1 1287 27 62 0 0 chr15 92080074 92080122 -11414852 + AT_rich Low_complexity Low_complexity 1 48 0 1 1287 474 18 0 0 chr15 92080576 92080631 -11414343 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1287 593 49 12 0 chr15 92080631 92080711 -11414263 + (TA)n Simple_repeat Simple_repeat 2 83 0 1 1287 483 295 82 15 chr15 92080889 92081085 -11413889 + B3 SINE B2 2 210 -6 1 1287 6583 19 0 0 chr15 92081531 92082346 -11412628 - L1Md_A LINE L1 0 6582 5834 1 1287 282 307 0 28 chr15 92082346 92082420 -11412554 + T-rich Low_complexity Low_complexity 5 75 0 1 1287 1093 173 16 0 chr15 92083111 92083302 -11411672 - URR1A DNA MER1_type -1 225 32 1 1287 508 318 103 63 chr15 92085582 92085981 -11408993 - LTR16B LTR ERVL -18 445 31 1 1287 720 152 0 0 chr15 92086472 92086604 -11408370 + (TG)n Simple_repeat Simple_repeat 1 132 0 1 1287 2099 304 72 24 chr15 92087111 92087978 -11406996 - Lx8 LINE L1 -342 7131 6224 1 1287 1230 286 49 70 chr15 92088280 92088352 -11406622 - Lx8 LINE L1 -1781 5915 5850 1 1287 3991 137 69 17 chr15 92088352 92089066 -11405908 - RMER6A LTR ERVK -4 752 2 1 1287 1230 296 102 31 chr15 92089066 92089804 -11405170 - Lx8 LINE L1 -31 5849 5047 1 1287 523 307 75 16 chr15 92089800 92090171 -11404803 - L1_Rod LINE L1 -3534 2313 1921 1 1287 885 75 17 0 chr15 92090177 92090297 -11404677 - ORR1A2 LTR MaLR -205 122 1 1 1287 413 333 11 11 chr15 92090685 92090958 -11404016 - L1_Rod LINE L1 -4359 1488 1216 1 1287 256 265 48 10 chr15 92091032 92091135 -11403839 - L1_Rod LINE L1 -6532 1076 970 1 1287 333 0 0 0 chr15 92091145 92091182 -11403792 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1287 371 384 53 0 chr15 92092156 92092289 -11402685 + RSINE1 SINE B4 3 142 -23 1 1287 507 33 0 0 chr15 92092291 92092352 -11402622 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1287 37 69 0 0 chr15 92092352 92092424 -11402550 + AT_rich Low_complexity Low_complexity 1 72 0 1 1287 1022 159 36 31 chr15 92092924 92093119 -11401855 + Lx4A LINE L1 6862 7057 -1 1 1287 405 0 0 0 chr15 92093239 92093284 -11401690 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1287 390 261 17 42 chr15 92093354 92093474 -11401500 + PB1D7 SINE Alu 4 120 0 1 1287 413 83 0 62 chr15 92094430 92094494 -11400480 - L1Md_F2 LINE L1 -351 6231 6172 1 1287 774 61 0 17 chr15 92094494 92094611 -11400363 + L1Md_F2 LINE L1 6458 6572 -10 1 1287 1117 52 0 0 chr15 92094667 92094803 -11400171 + B1_Mus1 SINE Alu 1 136 -12 1 1287 311 33 16 62 chr15 92094803 92094867 -11400107 + (CAAA)n Simple_repeat Simple_repeat 3 63 0 1 1287 2588 51 84 0 chr15 92096117 92096452 -11398522 - L1_Mus1 LINE L1 0 6567 6205 1 1287 26 0 0 0 chr15 92096834 92096860 -11398114 + AT_rich Low_complexity Low_complexity 1 26 0 1 1287 183 156 0 0 chr15 92097053 92097085 -11397889 + (TATG)n Simple_repeat Simple_repeat 3 34 0 1 1287 432 320 50 41 chr15 92097148 92097366 -11397608 - B4A SINE B4 -71 221 2 1 1287 1157 42 14 0 chr15 92097878 92098021 -11396953 - B1_Mm SINE Alu -1 146 2 1 1287 348 24 0 0 chr15 92098061 92098102 -11396872 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1287 23 54 0 0 chr15 92099854 92099891 -11395083 + AT_rich Low_complexity Low_complexity 1 37 0 1 1287 303 28 0 0 chr15 92100814 92100850 -11394124 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1287 681 224 41 12 chr15 92101363 92101570 -11393404 - Lx4B LINE L1 -5 7053 6764 1 1287 22 0 0 0 chr15 92103546 92103568 -11391406 + AT_rich Low_complexity Low_complexity 1 22 0 1 1287 408 88 0 0 chr15 92104290 92104347 -11390627 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1287 734 318 27 14 chr15 92104367 92104610 -11390364 - B4 SINE B4 -34 258 2 1 1287 483 48 0 0 chr15 92104692 92104754 -11390220 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 1287 31 58 0 0 chr15 92104869 92104921 -11390053 + AT_rich Low_complexity Low_complexity 1 52 0 1 1287 423 0 0 0 chr15 92105075 92105122 -11389852 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1287 1121 145 6 0 chr15 92106051 92106230 -11388744 + B2_Mm2 SINE B2 1 180 -15 1 1287 3155 32 8 3 chr15 92106230 92106611 -11388363 + L1Md_F3 LINE L1 6201 6583 -1 1 1287 247 359 0 19 chr15 92106815 92106923 -11388051 + PB1 SINE Alu 4 109 -18 1 1287 207 0 0 0 chr15 92107177 92107200 -11387774 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 1287 407 331 24 12 chr15 92107613 92107778 -11387196 + MLT1F1 LTR MaLR 403 569 0 1 1287 438 296 5 16 chr15 92107873 92108062 -11386912 + L1MD2 LINE L1 5299 5485 -874 1 1287 260 264 0 86 chr15 92108270 92108386 -11386588 + L1MD2 LINE L1 5675 5780 -579 1 1287 367 349 77 28 chr15 92108550 92108798 -11386176 + L1MD2 LINE L1 6064 6323 -36 1 1287 2478 106 37 3 chr15 92108809 92109187 -11385787 - Lx2 LINE L1 0 6997 6607 1 1287 279 0 0 0 chr15 92109387 92109418 -11385556 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 1287 261 0 0 0 chr15 92110141 92110170 -11384804 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1287 1083 270 108 43 chr15 92110624 92110976 -11383998 - MTE2b LTR MaLR -4 375 1 1 1287 239 0 32 0 chr15 92111384 92111415 -11383559 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 1287 243 0 0 0 chr15 92112121 92112148 -11382826 + (TTGTG)n Simple_repeat Simple_repeat 2 28 0 1 1287 368 348 21 27 chr15 92112181 92112367 -11382607 + B3A SINE B2 1 185 -13 1 1287 1781 65 19 72 chr15 92112448 92112711 -11382263 + L1_Mus2 LINE L1 6316 6564 -2 1 1287 26 74 0 0 chr15 92112714 92112768 -11382206 + AT_rich Low_complexity Low_complexity 1 54 0 1 1287 544 300 119 56 chr15 92112828 92113079 -11381895 + B4 SINE B4 26 292 0 1 1287 480 18 0 0 chr15 92113084 92113141 -11381833 + (GA)n Simple_repeat Simple_repeat 1 57 0 1 1287 232 274 53 95 chr15 92114747 92114916 -11380058 + L1MA5 LINE L1 6115 6276 -24 1 1287 201 209 0 44 chr15 92117787 92117832 -11377142 + polypyrimidine Low_complexity Low_complexity 1 43 0 1 1287 546 57 0 0 chr15 92117928 92117998 -11376976 + (TATG)n Simple_repeat Simple_repeat 4 73 0 1 1287 1077 250 157 11 chr15 92118042 92118487 -11376487 - Lx8 LINE L1 -5 7468 6959 1 1287 261 0 0 0 chr15 92118515 92118544 -11376430 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1287 27 0 0 0 chr15 92121550 92121577 -11373397 + AT_rich Low_complexity Low_complexity 1 27 0 1 1287 363 192 0 0 chr15 92121577 92121655 -11373319 + (TTTA)n Simple_repeat Simple_repeat 2 79 0 1 1287 520 192 92 0 chr15 92121697 92121817 -11373157 - RSINE1 SINE B4 -33 132 2 1 1287 1129 264 48 94 chr15 92122397 92122962 -11372012 - Lx9 LINE L1 -183 7461 6923 1 1287 40 0 0 0 chr15 92122988 92123028 -11371946 + AT_rich Low_complexity Low_complexity 1 40 0 1 1287 22 35 0 0 chr15 92123042 92123071 -11371903 + AT_rich Low_complexity Low_complexity 1 29 0 1 1287 447 329 78 152 chr15 92123106 92123294 -11371680 - B4 SINE B4 -29 263 84 1 1287 830 240 9 33 chr15 92123294 92123505 -11371469 - B3 SINE B2 -10 206 1 1 1287 447 329 78 152 chr15 92123505 92123599 -11371375 - B4 SINE B4 -209 83 2 1 1287 339 65 0 0 chr15 92124950 92124996 -11369978 + (TTTTC)n Simple_repeat Simple_repeat 4 49 0 1 1287 550 238 73 18 chr15 92124997 92125215 -11369759 - RMER17C LTR ERVK -136 274 45 1 1287 180 0 0 0 chr15 92125223 92125243 -11369731 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 1287 22 56 0 0 chr15 92125780 92125816 -11369158 + AT_rich Low_complexity Low_complexity 1 36 0 1 1287 21 0 0 0 chr15 92126911 92126932 -11368042 + AT_rich Low_complexity Low_complexity 1 21 0 1 1287 326 281 11 11 chr15 92127990 92128080 -11366894 - PB1D10 SINE Alu -27 90 1 1 1287 2960 75 2 63 chr15 92128423 92128616 -11366358 + MTB LTR MaLR 2 195 -205 1 1287 1206 49 0 0 chr15 92128616 92128758 -11366216 + B1_Mus1 SINE Alu 1 142 -6 1 1287 495 0 0 0 chr15 92128759 92128814 -11366160 + (TAA)n Simple_repeat Simple_repeat 3 57 0 1 1287 2960 75 2 63 chr15 92128814 92129043 -11365931 + MTB LTR MaLR 196 400 0 1 1287 207 167 0 0 chr15 92130254 92130296 -11364678 + T-rich Low_complexity Low_complexity 1 42 0 1 1287 751 67 235 0 chr15 92130299 92130418 -11364556 - B1_Mm SINE Alu 0 147 1 1 1287 30 59 0 0 chr15 92130682 92130733 -11364241 + AT_rich Low_complexity Low_complexity 1 51 0 1 1287 318 133 84 23 chr15 92131531 92131662 -11363312 + (TA)n Simple_repeat Simple_repeat 2 140 0 1 1287 21 0 0 0 chr15 92133512 92133533 -11361441 + AT_rich Low_complexity Low_complexity 1 21 0 1 1287 480 185 0 0 chr15 92134323 92134431 -11360543 + C-rich Low_complexity Low_complexity 2 109 0 2 1287 31 26 0 0 chr15 92136017 92136055 -11358919 + AT_rich Low_complexity Low_complexity 1 38 0 2 1287 626 250 126 11 chr15 92136058 92136240 -11358734 - B3 SINE B2 -11 205 3 2 1287 213 39 0 0 chr15 92136583 92136609 -11358365 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1287 574 266 11 199 chr15 92136639 92136991 -11357983 - B4 SINE B4 -4 288 3 2 1287 564 304 105 23 chr15 92137244 92137510 -11357464 + B4A SINE B4 1 288 -4 2 1287 323 347 124 16 chr15 92137553 92137802 -11357172 + B4A SINE B4 2 277 -15 2 1287 1224 32 29 16 chr15 92137802 92138119 -11356855 + (GA)n Simple_repeat Simple_repeat 1 321 0 2 1287 446 229 71 35 chr15 92138357 92138470 -11356504 - PB1D7 SINE Alu -2 118 2 2 1287 1577 69 9 5 chr15 92139560 92139778 -11355196 + L1_Mus3 LINE L1 6414 6632 -6 2 1287 276 260 78 68 chr15 92139864 92140083 -11354891 + RLTR21 LTR ERVK 1086 1306 -266 2 1287 250 314 0 11 chr15 92140084 92140171 -11354803 + (TG)n Simple_repeat Simple_repeat 1 86 0 2 1287 22 35 0 0 chr15 92141110 92141139 -11353835 + AT_rich Low_complexity Low_complexity 1 29 0 2 1287 610 361 43 11 chr15 92141272 92141549 -11353425 + B4 SINE B4 1 286 -6 2 1287 447 19 0 0 chr15 92141821 92141873 -11353101 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 1287 234 337 52 62 chr15 92142065 92142258 -11352716 - Lx8 LINE L1 -132 7341 7151 2 1287 1975 157 42 109 chr15 92142729 92143180 -11351794 - MTC LTR MaLR 0 421 1 2 1288 420 354 45 23 chr15 92144169 92144302 -11350672 + RSINE1 SINE B4 30 165 0 2 1288 478 79 0 26 chr15 92144384 92144462 -11350512 + (CATA)n Simple_repeat Simple_repeat 4 79 0 2 1288 22 0 0 0 chr15 92145415 92145437 -11349537 + AT_rich Low_complexity Low_complexity 1 22 0 2 1288 610 36 12 0 chr15 92145895 92145979 -11348995 - L1Md_T LINE L1 -2 6580 6496 2 1288 191 331 122 40 chr15 92146652 92146800 -11348174 - L2 LINE L2 -806 2613 2454 2 1288 1290 45 4 13 chr15 92149939 92150167 -11344807 + (TG)n Simple_repeat Simple_repeat 1 225 0 2 1288 554 336 98 15 chr15 92150257 92150592 -11344382 - MER63D DNA AcHobo -680 381 19 2 1288 1991 147 57 9 chr15 92151158 92151494 -11343480 - MTC LTR MaLR -1 420 69 2 1288 219 69 0 0 chr15 92153084 92153113 -11341861 + (TTAA)n Simple_repeat Simple_repeat 4 32 0 2 1288 602 249 57 23 chr15 92153510 92153687 -11341287 + B3A SINE B2 4 186 -12 2 1288 453 244 0 51 chr15 92154126 92154264 -11340710 + BGLII_B LTR ERVK 1 131 -310 2 1288 292 291 26 26 chr15 92154474 92154587 -11340387 + L2 LINE L2 770 882 -2537 2 1288 683 323 36 5 chr15 92154701 92154897 -11340077 + B3 SINE B2 1 202 -14 2 1288 558 322 39 45 chr15 92154964 92155120 -11339854 - RSINE1 SINE B4 -8 157 3 2 1288 747 254 23 46 chr15 92155323 92155542 -11339432 - B3 SINE B2 0 216 3 2 1288 276 77 0 0 chr15 92155725 92155764 -11339210 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 1288 567 74 0 0 chr15 92155762 92155843 -11339131 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 2 1288 25 0 0 0 chr15 92159298 92159323 -11335651 + AT_rich Low_complexity Low_complexity 1 25 0 2 1288 193 75 50 0 chr15 92160287 92160327 -11334647 + (TTA)n Simple_repeat Simple_repeat 1 42 0 2 1288 231 186 32 63 chr15 92160709 92160772 -11334202 + (TATATG)n Simple_repeat Simple_repeat 2 62 0 2 1288 209 194 0 0 chr15 92161479 92161515 -11333459 + (CATA)n Simple_repeat Simple_repeat 4 39 0 2 1288 3108 288 62 16 chr15 92161601 92162636 -11332338 - Lx8 LINE L1 -78 7395 6307 2 1288 311 65 22 0 chr15 92162636 92162682 -11332292 + (CAGA)n Simple_repeat Simple_repeat 4 50 0 2 1288 3108 288 62 16 chr15 92162682 92162792 -11332182 - Lx8 LINE L1 -1167 6306 6198 2 1288 209 171 0 0 chr15 92162808 92162843 -11332131 + (TGG)n Simple_repeat Simple_repeat 2 36 0 2 1288 383 309 35 48 chr15 92163101 92163332 -11331642 - Lx9 LINE L1 -1545 6099 5872 2 1288 525 165 16 16 chr15 92164354 92164477 -11330497 - Lx9 LINE L1 -10 7634 7512 2 1288 306 0 0 0 chr15 92164480 92164514 -11330460 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1288 1680 207 32 8 chr15 92164514 92164884 -11330090 - Lx9 LINE L1 -297 7347 6969 2 1288 921 281 53 16 chr15 92165475 92165793 -11329181 - RLTR14-int LTR ERV1 -4890 427 98 2 1288 638 252 0 0 chr15 92165806 92165933 -11329041 + RLTR14 LTR ERV1 3 129 -253 2 1288 1680 220 68 0 chr15 92166037 92166391 -11328583 - RLTR14 LTR ERV1 -2 380 3 2 1288 2458 224 42 53 chr15 92166415 92167691 -11327283 - L1_Rod LINE L1 -4033 1814 568 2 1288 504 331 139 34 chr15 92168343 92168686 -11326288 + ORR1E LTR MaLR 1 379 0 2 1288 588 248 0 31 chr15 92168755 92168884 -11326090 + B1_Mur4 SINE Alu 15 139 -11 2 1288 512 15 15 0 chr15 92168884 92168949 -11326025 + (TAAAA)n Simple_repeat Simple_repeat 2 67 0 2 1288 484 215 7 22 chr15 92169165 92169303 -11325671 + Lx9 LINE L1 7507 7642 -2 2 1288 27 0 0 0 chr15 92169445 92169472 -11325502 + AT_rich Low_complexity Low_complexity 1 27 0 2 1288 410 230 82 65 chr15 92172567 92172739 -11322235 + B3 SINE B2 43 215 -1 2 1288 1624 26 0 5 chr15 92173607 92173797 -11321177 + B2_Mm1a SINE B2 1 189 -4 2 1288 350 213 57 0 chr15 92174499 92174615 -11320359 + L1ME1 LINE L1 5874 6001 -332 2 1288 201 121 0 0 chr15 92174644 92174677 -11320297 + (GGA)n Simple_repeat Simple_repeat 1 33 0 2 1288 778 288 55 64 chr15 92174719 92175270 -11319704 + RLTR17 LTR ERVK 125 553 0 2 1288 391 315 104 27 chr15 92175364 92175547 -11319427 + B3A SINE B2 1 197 -1 2 1288 1157 55 0 0 chr15 92175549 92175694 -11319280 + B1_Mus2 SINE Alu 3 147 0 2 1288 21 0 0 0 chr15 92175694 92175715 -11319259 + AT_rich Low_complexity Low_complexity 1 21 0 2 1288 985 213 162 11 chr15 92175718 92175989 -11318985 - Lx6 LINE L1 -159 7301 6990 2 1288 246 309 84 28 chr15 92176884 92177027 -11317947 - MLT1H2 LTR MaLR -281 208 58 2 1288 229 339 71 60 chr15 92177299 92177481 -11317493 + B3A SINE B2 1 184 -14 2 1288 447 317 85 40 chr15 92177872 92178190 -11316784 + MLT1F1 LTR MaLR 180 541 -28 2 1288 3240 50 2 5 chr15 92178922 92179323 -11315651 + MTB LTR MaLR 1 400 0 2 1288 439 296 89 21 chr15 92181192 92181382 -11313592 - B3 SINE B2 -11 205 3 2 1288 3492 15 5 0 chr15 92181819 92182213 -11312761 + MTA_Mm LTR MaLR 1 396 0 2 1288 1046 16 0 0 chr15 92182213 92182337 -11312637 + MTA_Mm-int LTR MaLR 1 124 -974 2 1288 379 321 32 13 chr15 92182343 92182501 -11312473 - MLT1D LTR MaLR 0 505 345 2 1288 360 336 151 35 chr15 92182984 92183119 -11311855 + MT2A LTR ERVL 96 254 -279 2 1288 423 56 0 0 chr15 92183119 92183173 -11311801 + (CCG)n Simple_repeat Simple_repeat 2 55 0 2 1288 360 336 151 35 chr15 92183173 92183321 -11311653 + MT2A LTR ERVL 255 411 -122 2 1288 226 172 33 33 chr15 92183460 92183520 -11311454 + CT-rich Low_complexity Low_complexity 2 61 0 2 1288 396 0 0 0 chr15 92183540 92183584 -11311390 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 1288 218 32 32 0 chr15 92183584 92183614 -11311360 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1288 1999 190 0 51 chr15 92183672 92184066 -11310908 - MTC LTR MaLR -45 376 3 2 1288 381 51 0 33 chr15 92186235 92186296 -11308678 + ETnERV2-int LTR ERVK 1893 1951 -5455 2 1288 5208 148 30 65 chr15 92186289 92186527 -11308447 + ETnERV2-int LTR ERVK 2167 2384 -5022 2 1288 207 0 0 0 chr15 92186527 92186550 -11308424 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 1288 5208 148 30 65 chr15 92186550 92187441 -11307533 + ETnERV2-int LTR ERVK 2385 3256 -4150 2 1288 657 58 0 0 chr15 92187450 92187536 -11307438 + (CA)n Simple_repeat Simple_repeat 2 87 0 2 1288 205 169 15 30 chr15 92187846 92187913 -11307061 + A-rich Low_complexity Low_complexity 2 67 0 2 1288 1068 125 85 31 chr15 92188711 92188934 -11306040 - Lx3C LINE L1 -727 6249 6015 2 1288 4100 126 47 3 chr15 92188935 92189571 -11305403 + Lx3C LINE L1 6313 6976 0 2 1288 258 105 0 0 chr15 92189656 92189694 -11305280 + (T)n Simple_repeat Simple_repeat 1 38 0 2 1288 271 284 39 19 chr15 92189863 92189967 -11305007 + MER3 DNA MER1_type 98 203 -6 2 1288 372 293 48 105 chr15 92190092 92190302 -11304672 - MTEa LTR MaLR 0 379 182 2 1288 1021 288 52 88 chr15 92191108 92192036 -11302938 - Lx8 LINE L1 -1477 5996 5062 2 1288 1299 127 134 4 chr15 92192070 92192308 -11302666 - Lx LINE L1 -3 6651 6383 2 1288 2213 54 30 20 chr15 92192322 92192626 -11302348 - IAPLTR2b LTR ERVK -20 307 1 2 1288 5156 107 31 4 chr15 92192626 92193705 -11301269 - Lx LINE L1 -263 6391 5288 2 1288 3237 148 2 55 chr15 92193712 92194348 -11300626 + L1_Mm LINE L1 4482 5083 -800 2 1288 486 323 8 25 chr15 92194354 92194592 -11300382 + Lx7 LINE L1 5804 6037 -1659 2 1288 338 171 0 14 chr15 92195346 92195417 -11299557 + GA-rich Low_complexity Low_complexity 4 73 0 2 1288 926 207 6 75 chr15 92195417 92195905 -11299069 - RMER17C LTR ERVK -14 396 3 2 1288 31 44 0 0 chr15 92197312 92197357 -11297617 + AT_rich Low_complexity Low_complexity 1 45 0 2 1288 21 0 0 0 chr15 92198246 92198267 -11296707 + AT_rich Low_complexity Low_complexity 1 21 0 2 1288 3238 110 79 6 chr15 92198824 92199328 -11295646 - Lx2 LINE L1 -1 6996 6456 2 1288 216 0 0 0 chr15 92199401 92199425 -11295549 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 1288 212 335 18 40 chr15 92200088 92200212 -11294762 + MIRb SINE MIR 56 176 -100 2 1288 305 263 184 8 chr15 92201350 92201490 -11293484 - MLT2B1 LTR ERVL -74 488 330 2 1288 1762 148 132 3 chr15 92201492 92201810 -11293164 + ORR1B2 LTR MaLR 1 359 -8 2 1288 239 239 104 78 chr15 92201912 92202066 -11292908 - MLT2B1 LTR ERVL -362 158 1 2 1288 3034 98 68 4 chr15 92202441 92202556 -11292418 - Lx2 LINE L1 -1 6996 6868 2 1288 189 0 0 0 chr15 92202556 92202577 -11292397 + (CCCA)n Simple_repeat Simple_repeat 1 21 0 2 1288 3034 98 68 4 chr15 92202577 92202931 -11292043 - Lx2 LINE L1 -130 6867 6498 2 1288 207 0 0 0 chr15 92203033 92203056 -11291918 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 1288 596 235 22 7 chr15 92203544 92203681 -11291293 + MTD LTR MaLR 3 141 -278 2 1288 875 272 47 80 chr15 92203750 92204113 -11290861 - MTC-int LTR MaLR -385 873 523 3 1288 718 255 55 97 chr15 92204132 92204489 -11290485 + RMER4B LTR ERVK 308 574 -11 3 1288 23 0 0 0 chr15 92204532 92204555 -11290419 + AT_rich Low_complexity Low_complexity 1 23 0 3 1288 256 301 120 32 chr15 92204639 92204797 -11290177 - MIRc SINE MIR -5 263 92 3 1288 414 0 0 0 chr15 92205827 92205873 -11289101 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1288 286 406 12 36 chr15 92206199 92206447 -11288527 - L2 LINE L2 -989 2430 2189 3 1288 1757 249 21 19 chr15 92206963 92207446 -11287528 + Lx7 LINE L1 6566 7049 -647 3 1288 679 291 118 37 chr15 92207529 92207850 -11287124 - ORR1E LTR MaLR -10 349 3 3 1288 809 194 6 0 chr15 92208523 92208698 -11286276 + GA-rich Low_complexity Low_complexity 2 177 0 3 1288 22 0 0 0 chr15 92209509 92209531 -11285443 + AT_rich Low_complexity Low_complexity 1 22 0 3 1288 1296 243 127 11 chr15 92209632 92209994 -11284980 - MTD LTR MaLR -14 405 2 3 1288 888 126 0 0 chr15 92210110 92210261 -11284713 + (TG)n Simple_repeat Simple_repeat 2 152 0 3 1288 194 378 25 16 chr15 92211169 92211290 -11283684 + MIRc SINE MIR 38 159 -109 3 1288 484 294 64 64 chr15 92211427 92211834 -11283140 - L1M2 LINE L1 -522 5778 5372 3 1288 342 0 0 0 chr15 92211842 92211880 -11283094 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1288 715 316 124 29 chr15 92211968 92213093 -11281881 - L1M2 LINE L1 -940 5203 3972 3 1288 226 345 23 98 chr15 92214386 92214518 -11280456 - ID_B1 SINE B4 -102 122 1 3 1288 6433 233 90 21 chr15 92214920 92217168 -11277806 - Lx7 LINE L1 -2 7694 5300 3 1288 844 51 17 0 chr15 92217168 92217286 -11277688 + (TC)n Simple_repeat Simple_repeat 1 120 0 3 1288 3319 216 56 19 chr15 92217286 92217727 -11277247 - Lx7 LINE L1 -581 5299 4820 3 1288 3135 161 42 29 chr15 92217748 92218177 -11276797 - Lx7 LINE L1 -1777 4103 3678 3 1288 1108 58 22 0 chr15 92218177 92218315 -11276659 + B1_Mm SINE Alu 2 142 -5 3 1288 3135 161 42 29 chr15 92218315 92218583 -11276391 - Lx7 LINE L1 -2203 3677 3397 3 1288 3167 171 28 20 chr15 92218591 92219524 -11275450 - Lx7 LINE L1 -3986 1894 953 3 1288 300 27 0 0 chr15 92220198 92220235 -11274739 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1288 273 346 52 0 chr15 92220424 92220635 -11274339 - Lx7 LINE L1 -6897 831 610 3 1288 296 314 25 0 chr15 92220692 92220813 -11274161 - L1_Mur3 LINE L1 -6898 814 691 3 1288 1971 170 119 5 chr15 92221687 92222065 -11272909 - MTC LTR MaLR 0 421 1 3 1288 1188 111 0 0 chr15 92223004 92223184 -11271790 + (TTC)n Simple_repeat Simple_repeat 1 180 0 3 1288 2447 268 78 28 chr15 92223198 92224099 -11270875 - Lx8 LINE L1 -61 7412 6467 3 1288 1953 200 192 19 chr15 92224101 92224564 -11270410 + MT2B LTR ERVL 1 543 -58 3 1288 302 45 0 22 chr15 92224564 92224609 -11270365 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 1288 222 173 93 0 chr15 92224697 92224772 -11270202 + (TA)n Simple_repeat Simple_repeat 2 83 0 3 1288 240 101 72 0 chr15 92224872 92224941 -11270033 + T-rich Low_complexity Low_complexity 4 77 0 3 1288 2163 191 189 21 chr15 92225185 92225708 -11269266 + RMER19C LTR ERVK 1 611 0 3 1288 921 104 0 7 chr15 92226175 92226311 -11268663 + B1_Mus2 SINE Alu 1 135 -12 3 1288 234 0 0 0 chr15 92226331 92226357 -11268617 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 1288 327 113 0 0 chr15 92226699 92226761 -11268213 + (T)n Simple_repeat Simple_repeat 1 62 0 3 1288 916 85 273 0 chr15 92229130 92229295 -11265679 - URR1A DNA MER1_type -16 210 1 3 1288 1161 59 51 40 chr15 92230363 92230384 -11264590 - B2_Mm2 SINE B2 -16 179 162 3 1288 225 0 0 0 chr15 92230384 92230409 -11264565 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 3 1288 1161 59 51 40 chr15 92230409 92230564 -11264410 - B2_Mm2 SINE B2 -34 161 1 3 1288 186 71 0 0 chr15 92232477 92232505 -11262469 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1288 413 36 0 18 chr15 92233046 92233102 -11261872 + (TC)n Simple_repeat Simple_repeat 2 56 0 3 1288 235 213 29 103 chr15 92233885 92233953 -11261021 + B3A SINE B2 5 67 -131 3 1288 4228 98 3 1 chr15 92233953 92234740 -11260234 - L1_Mus4 LINE L1 -669 5967 5178 3 1288 418 240 72 32 chr15 92234740 92234865 -11260109 + B3A SINE B2 37 166 -32 3 1288 429 20 0 0 chr15 92234866 92234916 -11260058 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1288 315 0 0 0 chr15 92235344 92235379 -11259595 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1288 208 209 23 0 chr15 92235388 92235431 -11259543 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 1288 1274 27 0 0 chr15 92236037 92236184 -11258790 + B1_Mm SINE Alu 1 147 0 3 1288 1228 27 7 0 chr15 92237330 92237477 -11257497 - B1_Mus1 SINE Alu 0 148 1 3 1288 614 223 40 26 chr15 92238598 92238750 -11256224 - B3 SINE B2 -12 204 51 3 1288 186 267 82 82 chr15 92239205 92239303 -11255671 - MIR SINE MIR -56 206 109 3 1288 324 0 0 0 chr15 92239398 92239434 -11255540 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1288 252 190 104 10 chr15 92240542 92240621 -11254353 + PB1D7 SINE Alu 7 93 -24 3 1288 456 86 0 0 chr15 92241824 92241894 -11253080 + (TTGG)n Simple_repeat Simple_repeat 2 71 0 3 1288 931 139 14 14 chr15 92241894 92242029 -11252945 - B1_Mus1 SINE Alu -9 139 3 3 1288 450 0 0 0 chr15 92242537 92242587 -11252387 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1288 387 0 0 0 chr15 92243583 92243626 -11251348 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1288 598 308 109 16 chr15 92244444 92244701 -11250273 - MLT1B LTR MaLR -7 383 103 3 1288 692 249 66 6 chr15 92244755 92244921 -11250053 + B3A SINE B2 14 189 -9 3 1288 227 112 24 59 chr15 92245174 92245259 -11249715 + (TA)n Simple_repeat Simple_repeat 1 82 0 3 1288 241 356 76 8 chr15 92245260 92245379 -11249595 + MLT1J2 LTR MaLR 38 164 -284 3 1288 799 267 72 82 chr15 92245561 92245977 -11248997 - RMER15-int LTR ERVL -4136 863 452 3 1288 268 353 60 8 chr15 92245979 92246096 -11248878 + RMER15 LTR ERVL 452 574 -1 3 1288 284 300 74 16 chr15 92246177 92246299 -11248675 - RMER15 LTR ERVL -446 129 1 3 1288 2703 205 124 70 chr15 92248940 92249684 -11245290 + Lx9 LINE L1 6743 7476 -168 3 1288 288 0 0 0 chr15 92249684 92249716 -11245258 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1288 2703 205 124 70 chr15 92249716 92249825 -11245149 + Lx9 LINE L1 7477 7641 -3 3 1288 642 60 0 0 chr15 92251961 92252044 -11242930 + (TTC)n Simple_repeat Simple_repeat 2 84 0 3 1288 405 0 0 0 chr15 92252044 92252088 -11242886 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 1288 1040 272 102 25 chr15 92252088 92252450 -11242524 - Lx5 LINE L1 -24 7026 6637 3 1288 3182 80 5 7 chr15 92253722 92254150 -11240824 - Lx LINE L1 0 6654 6228 3 1288 341 77 0 0 chr15 92254150 92254202 -11240772 + Lx LINE L1 6010 6061 -593 3 1288 181 297 174 51 chr15 92254555 92254750 -11240224 - L2 LINE L2 -503 2916 2698 3 1288 665 196 156 6 chr15 92255597 92255777 -11239197 - B3 SINE B2 -7 209 3 3 1288 236 290 0 0 chr15 92255819 92255881 -11239093 + B3A SINE B2 4 65 -133 3 1288 505 332 52 1 chr15 92256520 92256856 -11238118 - L1_Mur3 LINE L1 -3238 2609 2232 3 1288 780 153 144 23 chr15 92256982 92257156 -11237818 - B2_Mm2 SINE B2 0 195 1 3 1288 371 298 96 8 chr15 92257215 92257455 -11237519 - L1_Mur3 LINE L1 -3920 1927 1667 3 1288 618 14 0 0 chr15 92258381 92258452 -11236522 + (TA)n Simple_repeat Simple_repeat 1 71 0 3 1288 212 125 40 27 chr15 92258587 92258661 -11236313 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 3 1288 518 313 32 52 chr15 92258670 92258921 -11236053 - L1M2 LINE L1 -495 5805 5555 3 1288 1749 160 65 75 chr15 92258921 92259292 -11235682 + ORR1B2 LTR MaLR 1 367 0 3 1288 518 313 32 52 chr15 92259292 92259536 -11235438 - L1M2 LINE L1 -746 5554 5320 3 1288 957 207 100 0 chr15 92259544 92259805 -11235169 - Lx9 LINE L1 -4 7640 7354 3 1288 519 69 0 0 chr15 92259810 92259882 -11235092 + (TG)n Simple_repeat Simple_repeat 2 73 0 3 1288 24 32 0 0 chr15 92260046 92260077 -11234897 + AT_rich Low_complexity Low_complexity 1 31 0 3 1288 2766 302 36 28 chr15 92260415 92261571 -11233403 + Lx8 LINE L1 6145 7310 -163 3 1288 780 315 27 29 chr15 92261640 92262156 -11232818 - L1M2 LINE L1 -1201 4942 4428 3 1288 677 142 0 34 chr15 92262166 92262283 -11232691 - B1_Mur3 SINE Alu -6 143 31 3 1288 241 247 54 120 chr15 92262206 92262298 -11232676 - RLTR25A LTR ERVK -521 582 497 3 1288 963 213 37 37 chr15 92262339 92262554 -11232420 - B3 SINE B2 0 216 2 3 1288 444 326 63 12 chr15 92262589 92263002 -11231972 - L1M2 LINE L1 -2812 3331 2898 3 1288 1463 292 51 32 chr15 92263461 92264052 -11230922 + Lx9 LINE L1 6531 7132 -512 3 1288 324 48 0 0 chr15 92264052 92264094 -11230880 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1288 378 162 34 17 chr15 92264087 92264206 -11230768 + (TA)n Simple_repeat Simple_repeat 1 121 0 3 1288 242 316 0 12 chr15 92264764 92264844 -11230130 + GA-rich Low_complexity Low_complexity 2 80 0 3 1288 219 36 0 0 chr15 92265048 92265076 -11229898 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 3 1288 234 326 76 69 chr15 92266500 92266645 -11228329 - RSINE1 SINE B4 -19 146 1 3 1288 1836 164 22 10 chr15 92267657 92267971 -11227003 + RLTR31B_Mm LTR ERVK 224 541 -16 3 1288 26 0 0 0 chr15 92267976 92268002 -11226972 + AT_rich Low_complexity Low_complexity 1 26 0 3 1288 186 43 0 0 chr15 92268366 92268389 -11226585 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 1288 21 0 0 0 chr15 92269632 92269653 -11225321 + AT_rich Low_complexity Low_complexity 1 21 0 3 1288 315 127 0 0 chr15 92269798 92269861 -11225113 + (G)n Simple_repeat Simple_repeat 1 63 0 3 1288 417 167 0 0 chr15 92270119 92270221 -11224753 + CT-rich Low_complexity Low_complexity 1 102 0 3 1288 913 102 0 12 chr15 92270235 92270403 -11224571 + (TTC)n Simple_repeat Simple_repeat 1 166 0 3 1288 441 0 0 0 chr15 92270403 92270452 -11224522 + (TCG)n Simple_repeat Simple_repeat 1 49 0 3 1288 1155 70 0 0 chr15 92270452 92270623 -11224351 + (TTC)n Simple_repeat Simple_repeat 3 173 0 3 1288 227 79 0 26 chr15 92270634 92270673 -11224301 + (TC)n Simple_repeat Simple_repeat 2 39 0 3 1288 375 41 0 0 chr15 92270895 92270944 -11224030 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1288 513 0 0 0 chr15 92271549 92271606 -11223368 + (GA)n Simple_repeat Simple_repeat 2 58 0 3 1288 330 253 35 0 chr15 92273173 92273260 -11221714 - B1_Mur1 SINE Alu -2 147 58 3 1288 1194 63 6 22 chr15 92274257 92274436 -11220538 + (GGAGAA)n Simple_repeat Simple_repeat 3 178 0 3 1288 357 62 0 0 chr15 92274436 92274484 -11220490 + (GGA)n Simple_repeat Simple_repeat 2 49 0 4 1289 251 340 53 47 chr15 92275345 92275515 -11219459 - L3 LINE CR1 -125 4364 4194 4 1289 335 273 111 0 chr15 92276786 92276885 -11218089 + MER106A DNA MER1_type 55 164 -72 4 1289 2478 138 103 14 chr15 92277113 92277598 -11217376 - RLTR11A LTR ERVK 0 528 1 4 1289 353 22 22 0 chr15 92277711 92277757 -11217217 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1289 941 107 39 26 chr15 92280041 92280195 -11214779 + B2_Mm2 SINE B2 1 156 -39 4 1289 294 73 0 0 chr15 92280196 92280237 -11214737 + (TTAA)n Simple_repeat Simple_repeat 4 44 0 4 1289 1135 103 3 17 chr15 92281254 92281919 -11213055 + (CA)n Simple_repeat Simple_repeat 1 655 0 4 1289 1092 128 37 16 chr15 92284025 92284216 -11210758 + B2_Mm2 SINE B2 1 195 0 4 1289 1209 35 48 0 chr15 92284216 92284447 -11210527 + (GAAA)n Simple_repeat Simple_repeat 1 241 0 4 1289 207 0 0 0 chr15 92284447 92284470 -11210504 + (GGAAA)n Simple_repeat Simple_repeat 2 24 0 4 1289 1233 60 0 0 chr15 92285803 92285970 -11209004 + L1_Mus4 LINE L1 6277 6443 -193 4 1289 1029 252 45 102 chr15 92286030 92286502 -11208472 - RMER19C LTR ERVK -287 450 1 4 1289 201 175 0 0 chr15 92286506 92286546 -11208428 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1289 1051 282 52 47 chr15 92286574 92286654 -11208320 - MTEa LTR MaLR -11 368 297 4 1289 1006 212 51 9 chr15 92286654 92286868 -11208106 - URR1B DNA MER1_type -2 223 1 4 1289 1051 282 52 47 chr15 92286868 92287151 -11207823 - MTEa LTR MaLR -83 296 3 4 1289 237 173 164 55 chr15 92287527 92287582 -11207392 - ID4_ SINE ID -7 76 16 4 1289 359 356 15 0 chr15 92288368 92288500 -11206474 + ID_B1 SINE B4 89 222 -2 4 1289 251 320 73 112 chr15 92289242 92289474 -11205500 - MLT1J1 LTR MaLR -129 315 93 4 1289 1454 263 88 35 chr15 92290489 92290978 -11203996 - MT2A LTR ERVL -18 515 1 4 1289 1658 21 0 10 chr15 92290981 92291173 -11203801 - B2_Mm1a SINE B2 -2 191 2 4 1289 203 130 0 42 chr15 92291194 92291242 -11203732 + (TTA)n Simple_repeat Simple_repeat 1 46 0 4 1289 208 130 43 0 chr15 92291694 92291740 -11203234 + GA-rich Low_complexity Low_complexity 2 49 0 4 1289 531 45 0 0 chr15 92292276 92292342 -11202632 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 4 1289 816 125 0 0 chr15 92292986 92293114 -11201860 + (TA)n Simple_repeat Simple_repeat 1 128 0 4 1289 212 118 78 0 chr15 92293344 92293395 -11201579 + (TAAA)n Simple_repeat Simple_repeat 1 55 0 4 1289 210 143 0 0 chr15 92293571 92293606 -11201368 + (TTATG)n Simple_repeat Simple_repeat 2 36 0 4 1289 363 294 78 23 chr15 92293609 92293738 -11201236 - B1_Mur1 SINE Alu -13 136 1 4 1289 246 286 13 0 chr15 92294463 92294540 -11200434 + CT-rich Low_complexity Low_complexity 2 79 0 4 1289 351 113 0 0 chr15 92296706 92296768 -11198206 + (A)n Simple_repeat Simple_repeat 1 62 0 4 1289 369 236 24 0 chr15 92297395 92297522 -11197452 + (TG)n Simple_repeat Simple_repeat 1 130 0 4 1289 23 0 0 0 chr15 92297678 92297701 -11197273 + AT_rich Low_complexity Low_complexity 1 23 0 4 1289 1080 165 19 42 chr15 92300360 92300575 -11194399 - ORR1A4 LTR MaLR -119 210 1 4 1289 2934 30 0 0 chr15 92300641 92300978 -11193996 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1289 18685 19 2 1 chr15 92300978 92303187 -11191787 - IAPEz-int LTR ERVK 0 6481 4270 4 1289 15327 33 46 7 chr15 92303183 92305151 -11189823 - IAPEz-int LTR ERVK -4428 2053 8 4 1289 2934 30 0 0 chr15 92305151 92305488 -11189486 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1289 716 246 74 74 chr15 92305578 92305929 -11189045 + RLTR15 LTR ERVK 1 351 -8 4 1289 210 150 0 0 chr15 92306222 92306262 -11188712 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1289 243 88 0 0 chr15 92306651 92306685 -11188289 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1289 252 0 0 0 chr15 92307238 92307266 -11187708 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1289 423 0 0 0 chr15 92307268 92307315 -11187659 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 4 1289 1317 256 119 32 chr15 92308210 92308621 -11186353 - Lx8 LINE L1 -153 7320 6874 4 1289 201 227 0 120 chr15 92310252 92310327 -11184647 - L3 LINE CR1 -513 3976 3911 4 1289 210 71 0 0 chr15 92310421 92310449 -11184525 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1289 522 0 0 0 chr15 92310955 92311013 -11183961 + (GA)n Simple_repeat Simple_repeat 1 58 0 4 1289 427 202 35 32 chr15 92312303 92312549 -11182425 + Lx9 LINE L1 7360 7629 -15 4 1289 228 292 61 17 chr15 92313584 92313699 -11181275 + RMER12 LTR ERVK 737 856 -466 4 1289 536 341 56 35 chr15 92313776 92313847 -11181127 - B4A SINE B4 0 292 230 4 1289 580 0 40 0 chr15 92313847 92313922 -11181052 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 4 1289 518 244 102 0 chr15 92313922 92314049 -11180925 - B1_Mur2 SINE Alu -9 140 1 4 1289 536 341 56 35 chr15 92314049 92314262 -11180712 - B4A SINE B4 -63 229 2 4 1289 5330 71 18 6 chr15 92314409 92315114 -11179860 + L1_Mus2 LINE L1 5853 6566 0 4 1289 299 276 73 37 chr15 92315735 92315844 -11179130 - Lx8 LINE L1 -726 6747 6635 4 1289 21 0 0 0 chr15 92316769 92316790 -11178184 + AT_rich Low_complexity Low_complexity 1 21 0 4 1289 255 307 40 0 chr15 92317546 92317621 -11177353 + MER3 DNA MER1_type 39 116 -93 4 1289 351 0 0 0 chr15 92317877 92317916 -11177058 + (TC)n Simple_repeat Simple_repeat 2 40 0 4 1289 387 0 0 0 chr15 92317916 92317958 -11177016 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1289 652 349 62 4 chr15 92317961 92318217 -11176757 - B4A SINE B4 -20 272 2 4 1289 234 0 0 0 chr15 92318811 92318837 -11176137 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1289 1179 240 37 56 chr15 92319151 92319526 -11175448 + ORR1D2 LTR MaLR 1 368 -2 4 1289 252 0 0 0 chr15 92319888 92319916 -11175058 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1289 189 0 0 0 chr15 92321126 92321147 -11173827 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 4 1289 480 288 47 55 chr15 92322277 92322586 -11172388 + ORR1E LTR MaLR 9 378 -1 4 1289 2106 127 15 9 chr15 92323496 92323823 -11171151 - ORR1A4 LTR MaLR 0 329 1 4 1289 672 93 0 0 chr15 92323908 92324005 -11170969 + (TTTTC)n Simple_repeat Simple_repeat 2 98 0 4 1289 580 138 17 76 chr15 92324005 92324123 -11170851 - B1_Mur3 SINE Alu -12 137 27 4 1289 285 188 0 104 chr15 92324064 92324141 -11170833 - MT2B LTR ERVL -359 242 174 4 1289 1063 189 21 0 chr15 92324987 92325177 -11169797 - URR1A DNA MER1_type -26 200 7 4 1289 23 0 0 0 chr15 92327686 92327709 -11167265 + AT_rich Low_complexity Low_complexity 1 23 0 4 1289 1104 44 0 29 chr15 92328222 92328362 -11166612 - B1_Mus2 SINE Alu -11 136 1 4 1289 337 235 0 25 chr15 92330389 92330511 -11164463 - Lx9 LINE L1 -2 7642 7524 4 1289 217 191 0 45 chr15 92330964 92331008 -11163966 + C-rich Low_complexity Low_complexity 2 43 0 4 1289 198 71 0 0 chr15 92331220 92331248 -11163726 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 4 1289 319 241 0 25 chr15 92332097 92332178 -11162796 - L1MB7 LINE L1 -219 5965 5887 4 1289 2826 94 25 16 chr15 92332208 92332639 -11162335 - L1_Mus3 LINE L1 0 6638 6204 4 1289 1612 86 0 0 chr15 92332640 92332862 -11162112 + L1_Mus3 LINE L1 5990 6211 -425 4 1289 269 366 0 0 chr15 92332883 92332976 -11161998 + (TG)n Simple_repeat Simple_repeat 2 94 0 4 1289 300 314 129 36 chr15 92332998 92333137 -11161837 - RSINE1 SINE B4 -11 154 3 4 1289 326 286 57 29 chr15 92333444 92333653 -11161321 - L1MB7 LINE L1 -672 5502 5288 4 1289 293 391 54 25 chr15 92334587 92334682 -11160292 + Charlie1a DNA MER1_type 2 96 -1359 4 1289 288 0 0 0 chr15 92334682 92334714 -11160260 + (TTA)n Simple_repeat Simple_repeat 1 32 0 4 1289 293 391 54 25 chr15 92334714 92334745 -11160229 + Charlie1a DNA MER1_type 97 127 -1328 4 1289 932 240 116 12 chr15 92334745 92335082 -11159892 + ORR1D1 LTR MaLR 2 373 -1 4 1289 293 391 54 25 chr15 92335082 92335193 -11159781 + Charlie1a DNA MER1_type 128 247 -1208 4 1289 351 309 85 30 chr15 92335241 92335441 -11159533 + Charlie1a DNA MER1_type 258 468 -987 4 1289 430 349 87 23 chr15 92335503 92335802 -11159172 + Lx8 LINE L1 6932 7249 -224 4 1289 497 16 16 0 chr15 92335802 92335864 -11159110 + (TA)n Simple_repeat Simple_repeat 2 64 0 4 1289 380 310 93 37 chr15 92336058 92336453 -11158521 + Charlie1a DNA MER1_type 538 988 -467 4 1289 396 0 0 0 chr15 92336491 92336535 -11158439 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 1289 254 162 40 26 chr15 92336579 92336655 -11158319 + A-rich Low_complexity Low_complexity 4 80 0 4 1289 1012 319 30 13 chr15 92336682 92337076 -11157898 - Lx7 LINE L1 -388 7308 6908 4 1289 327 169 0 0 chr15 92337140 92337211 -11157763 + (TG)n Simple_repeat Simple_repeat 1 71 0 4 1289 265 263 0 39 chr15 92337212 92337315 -11157659 + T-rich Low_complexity Low_complexity 2 100 0 4 1289 3296 259 34 19 chr15 92337330 92338649 -11156325 - Lx7 LINE L1 -917 6779 5436 4 1289 781 251 45 22 chr15 92338667 92338936 -11156038 + L1_Mur3 LINE L1 4922 5196 -684 4 1289 304 228 157 26 chr15 92339014 92339167 -11155807 + Charlie1a DNA MER1_type 1227 1399 -56 4 1289 235 173 0 37 chr15 92340346 92340400 -11154574 + A-rich Low_complexity Low_complexity 2 53 0 4 1289 660 94 0 0 chr15 92341939 92342045 -11152929 + (GA)n Simple_repeat Simple_repeat 2 107 0 4 1289 235 289 136 32 chr15 92342225 92342350 -11152624 + MLT1N2 LTR MaLR 32 169 -393 4 1289 248 389 34 57 chr15 92342419 92342681 -11152293 + MLT1N2 LTR MaLR 295 550 -12 4 1289 612 116 0 0 chr15 92343159 92343254 -11151720 + (TC)n Simple_repeat Simple_repeat 2 96 0 4 1289 507 33 0 0 chr15 92343245 92343306 -11151668 + (TTC)n Simple_repeat Simple_repeat 2 62 0 4 1289 1148 69 0 0 chr15 92343307 92343452 -11151522 - B1_Mus2 SINE Alu 0 147 3 4 1289 387 0 0 0 chr15 92343452 92343495 -11151479 + (TC)n Simple_repeat Simple_repeat 1 43 0 4 1289 210 250 29 29 chr15 92347896 92347966 -11147008 - MIRc SINE MIR -135 133 64 4 1289 181 30 91 0 chr15 92348227 92348260 -11146714 + (TTTAA)n Simple_repeat Simple_repeat 2 37 0 4 1289 552 200 60 17 chr15 92348330 92348447 -11146527 - B1_Mus1 SINE Alu -1 147 26 4 1289 227 274 144 61 chr15 92348331 92348463 -11146511 - B4A SINE B4 -68 224 82 4 1289 3734 135 39 96 chr15 92348591 92349384 -11145590 + RMER6A LTR ERVK 3 750 -6 4 1289 3344 28 8 2 chr15 92349644 92350038 -11144936 + MTA_Mm LTR MaLR 1 396 0 4 1289 592 264 7 0 chr15 92352035 92352175 -11142799 - ID_B1 SINE B4 0 224 84 4 1289 877 119 13 0 chr15 92354249 92354400 -11140574 + (GGAA)n Simple_repeat Simple_repeat 4 156 0 4 1289 283 161 10 51 chr15 92354411 92354509 -11140465 + GA-rich Low_complexity Low_complexity 1 94 0 5 1289 200 94 0 30 chr15 92354511 92354544 -11140430 + (GAGAA)n Simple_repeat Simple_repeat 4 35 0 5 1289 582 239 49 0 chr15 92354585 92354727 -11140247 - B1F SINE Alu 0 149 1 5 1289 26 0 0 0 chr15 92354900 92354926 -11140048 + AT_rich Low_complexity Low_complexity 1 26 0 5 1289 189 0 0 0 chr15 92356421 92356442 -11138532 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1289 237 303 79 20 chr15 92357323 92357424 -11137550 - MamGypLTR3 LTR Gypsy -243 596 490 5 1289 360 0 0 0 chr15 92357818 92357858 -11137116 + (TTA)n Simple_repeat Simple_repeat 1 40 0 5 1289 245 330 68 113 chr15 92358776 92359042 -11135932 + ORR1E LTR MaLR 96 349 -10 5 1289 198 0 0 0 chr15 92359042 92359064 -11135910 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1289 28 48 0 0 chr15 92359130 92359172 -11135802 + AT_rich Low_complexity Low_complexity 1 42 0 5 1289 324 0 0 0 chr15 92359823 92359859 -11135115 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1289 318 194 0 0 chr15 92360283 92360350 -11134624 + (TA)n Simple_repeat Simple_repeat 2 68 0 5 1289 541 256 166 0 chr15 92360710 92360815 -11134159 - Lx8 LINE L1 -204 7269 7161 5 1289 438 20 0 0 chr15 92360815 92360866 -11134108 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1289 541 256 166 0 chr15 92360866 92360959 -11134015 - Lx8 LINE L1 -313 7160 7039 5 1289 400 269 33 16 chr15 92362212 92362333 -11132641 - B1F SINE Alu -5 144 22 5 1289 1048 46 0 0 chr15 92362432 92362562 -11132412 - B1_Mus2 SINE Alu 0 147 18 5 1289 21 36 0 0 chr15 92362624 92362652 -11132322 + AT_rich Low_complexity Low_complexity 1 28 0 5 1289 317 283 50 8 chr15 92362714 92362835 -11132139 - L1M4 LINE L1 -2556 3590 3465 5 1289 285 238 0 0 chr15 92362864 92362944 -11132030 + A-rich Low_complexity Low_complexity 1 80 0 5 1289 446 246 0 0 chr15 92362945 92363063 -11131911 + L1_Mur3 LINE L1 3647 3764 -2116 5 1289 1590 284 35 4 chr15 92363078 92363566 -11131408 + Lx8 LINE L1 6243 6745 -728 5 1289 240 274 161 0 chr15 92363582 92363706 -11131268 + Lx8 LINE L1 6973 7116 -357 5 1289 1460 158 21 35 chr15 92364244 92364527 -11130447 + RLTR46 LTR ERVK 42 320 0 5 1289 357 222 0 0 chr15 92365435 92365534 -11129440 + (TG)n Simple_repeat Simple_repeat 1 99 0 5 1289 248 266 83 145 chr15 92365550 92365695 -11129279 - B1_Mm SINE Alu -9 140 5 5 1289 423 95 358 37 chr15 92365826 92365935 -11129039 - B2_Mm2 SINE B2 -5 190 47 5 1289 1100 74 104 6 chr15 92365968 92366132 -11128842 - B2_Mm2 SINE B2 -15 180 1 5 1289 805 332 74 60 chr15 92366132 92366879 -11128095 - L1M2 LINE L1 -2707 3436 2680 5 1289 2990 210 62 0 chr15 92367109 92367734 -11127240 - Lx5 LINE L1 -36 7014 6351 5 1289 1408 259 42 33 chr15 92368081 92368440 -11126534 + MTE2a LTR MaLR 16 377 -2 5 1289 579 118 569 0 chr15 92368576 92368720 -11126254 + URR1A DNA MER1_type 1 226 0 5 1289 226 262 198 32 chr15 92368919 92369045 -11125929 - B1_Mus1 SINE Alu -1 147 1 5 1289 261 0 0 0 chr15 92369082 92369111 -11125863 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1289 227 194 44 15 chr15 92369349 92369417 -11125557 - L1MEf LINE L1 -5020 1180 1111 5 1289 592 302 161 20 chr15 92369877 92370156 -11124818 - MTE2a LTR MaLR -81 298 11 5 1289 353 155 13 32 chr15 92370610 92370730 -11124244 - B2_Mm2 SINE B2 0 195 47 5 1289 1233 107 11 0 chr15 92370762 92370939 -11124035 - B2_Mm1t SINE B2 -14 179 1 5 1289 272 162 0 57 chr15 92371444 92371549 -11123425 + A-rich Low_complexity Low_complexity 1 99 0 5 1289 719 286 19 14 chr15 92371555 92371764 -11123210 - B3 SINE B2 -6 210 1 5 1289 719 300 55 5 chr15 92371785 92371986 -11122988 - B3 SINE B2 0 216 6 5 1289 2871 45 55 18 chr15 92372884 92373267 -11121707 - MTB LTR MaLR -3 397 1 5 1289 279 344 0 11 chr15 92373354 92373448 -11121526 - RSINE1 SINE B4 -71 94 2 5 1289 211 216 26 39 chr15 92373581 92373658 -11121316 + (CAGG)n Simple_repeat Simple_repeat 2 77 0 5 1289 658 301 149 43 chr15 92373660 92374077 -11120897 - L2 LINE L2 -337 3082 2622 5 1289 315 0 0 0 chr15 92374636 92374671 -11120303 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1289 839 278 57 19 chr15 92374691 92374955 -11120019 - B4A SINE B4 -18 274 1 5 1289 402 260 55 119 chr15 92374983 92375184 -11119790 - RLTR11B LTR ERVK -13 440 253 5 1289 464 277 26 108 chr15 92375181 92375412 -11119562 - RLTR11B LTR ERVK -139 314 103 5 1289 239 221 48 83 chr15 92375645 92375729 -11119245 - ID4_ SINE ID -2 81 1 5 1289 4081 74 4 0 chr15 92376035 92376563 -11118411 - L1_Mus1 LINE L1 -1 6566 6037 5 1289 3097 43 12 0 chr15 92376563 92376962 -11118012 + L1Md_F2 LINE L1 5642 6045 -537 5 1289 734 269 42 69 chr15 92377318 92377650 -11117324 - Lx8 LINE L1 -59 7414 7092 5 1289 1149 164 9 44 chr15 92377650 92377983 -11116991 - RMER17C LTR ERVK 0 410 1 5 1289 531 285 26 21 chr15 92378004 92378194 -11116780 - Lx8 LINE L1 -417 7056 6866 5 1289 225 0 0 0 chr15 92380593 92380618 -11114356 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 1289 2876 158 37 2 chr15 92381120 92381629 -11113345 - RLTR11A LTR ERVK 0 528 2 5 1289 186 295 16 32 chr15 92381660 92381723 -11113251 - L2b LINE L2 -2 3373 3312 5 1289 395 318 25 9 chr15 92382607 92382742 -11112232 + B4A SINE B4 107 243 -49 5 1289 454 338 105 32 chr15 92383295 92383543 -11111431 - MLT1A0 LTR MaLR -6 359 94 5 1289 408 308 128 92 chr15 92383691 92383995 -11110979 - MLT1F1 LTR MaLR -8 561 247 5 1289 3430 249 48 18 chr15 92384001 92384937 -11110037 - RCHARR1 DNA MER1_type -8 966 3 5 1289 409 332 0 6 chr15 92385037 92385169 -11109805 - MLT1F1 LTR MaLR -406 149 24 5 1289 354 368 127 30 chr15 92385184 92385313 -11109661 - MLT1F1-int LTR MaLR 0 1489 1357 5 1289 876 209 139 75 chr15 92385313 92385659 -11109315 - RLTR9A LTR ERVK 0 368 1 5 1289 354 368 127 30 chr15 92385659 92385829 -11109145 - MLT1F1-int LTR MaLR -133 1356 1161 5 1289 465 354 67 29 chr15 92385900 92386246 -11108728 - MLT1F1-int LTR MaLR -462 1027 669 5 1289 260 300 0 0 chr15 92386373 92386443 -11108531 - MLT1F1-int LTR MaLR -999 490 421 5 1289 878 108 73 13 chr15 92386485 92386556 -11108418 + URR1B DNA MER1_type 67 148 -77 5 1289 279 0 0 0 chr15 92386556 92386587 -11108387 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1289 878 108 73 13 chr15 92386587 92386665 -11108309 + URR1B DNA MER1_type 149 225 0 5 1289 2974 112 9 9 chr15 92386876 92387319 -11107655 + Lx4A LINE L1 6615 7057 -1 5 1289 943 150 0 22 chr15 92387319 92387503 -11107471 + GA-rich Low_complexity Low_complexity 1 180 0 5 1289 196 385 70 40 chr15 92388951 92389051 -11105923 + MIRb SINE MIR 2 104 -164 5 1289 803 262 19 5 chr15 92389251 92389458 -11105516 + Lx8 LINE L1 6731 6940 -533 5 1289 1147 266 41 46 chr15 92389460 92389827 -11105147 + ORR1D2 LTR MaLR 6 370 0 5 1289 1017 306 32 3 chr15 92389827 92390138 -11104836 + Lx8 LINE L1 6953 7272 -201 5 1289 305 188 76 38 chr15 92390185 92390290 -11104684 + Lx8 LINE L1 7364 7472 -1 5 1289 335 244 0 37 chr15 92390442 92390523 -11104451 + polypurine Low_complexity Low_complexity 3 80 0 5 1289 1363 253 74 11 chr15 92390881 92391260 -11103714 + MTD LTR MaLR 6 408 -11 5 1289 23 33 0 0 chr15 92391583 92391613 -11103361 + AT_rich Low_complexity Low_complexity 1 30 0 5 1289 213 121 0 0 chr15 92391613 92391646 -11103328 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 1289 450 0 0 0 chr15 92394407 92394457 -11100517 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1289 772 154 31 0 chr15 92394551 92394681 -11100293 - B1_Mur3 SINE Alu -4 145 12 5 1289 553 80 0 22 chr15 92394702 92394792 -11100182 + (TTCCC)n Simple_repeat Simple_repeat 1 88 0 5 1289 202 77 0 0 chr15 92394793 92394819 -11100155 + (TTTC)n Simple_repeat Simple_repeat 4 29 0 5 1289 544 216 187 0 chr15 92394824 92394958 -11100016 - RSINE1 SINE B4 -2 163 5 5 1289 1393 103 110 29 chr15 92396371 92396580 -11098394 - URR1A DNA MER1_type 0 226 1 5 1289 1849 182 127 16 chr15 92397085 92397464 -11097510 - MTC LTR MaLR 0 421 1 5 1289 4619 195 59 43 chr15 92397470 92398605 -11096369 - MTC-int LTR MaLR -13 1245 93 5 1289 230 71 0 0 chr15 92398612 92398654 -11096320 + Lx LINE L1 6613 6654 0 5 1289 222 270 0 0 chr15 92398682 92398745 -11096229 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 1289 329 300 30 10 chr15 92399080 92399181 -11095793 + B4A SINE B4 2 104 -188 5 1289 408 129 139 79 chr15 92399176 92399277 -11095697 - MTC-int LTR MaLR -1150 108 2 5 1289 1822 198 68 18 chr15 92399276 92399671 -11095303 - MTC LTR MaLR 0 421 7 5 1289 971 288 65 11 chr15 92399857 92400134 -11094840 + B4A SINE B4 1 292 0 5 1289 1048 73 5 53 chr15 92400335 92400524 -11094450 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 5 1289 357 24 0 0 chr15 92401286 92401328 -11093646 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1289 749 255 25 30 chr15 92402798 92402815 -11092159 - B3 SINE B2 -15 201 186 5 1289 381 22 0 0 chr15 92402815 92402861 -11092113 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1289 749 255 25 30 chr15 92402861 92403045 -11091929 - B3 SINE B2 -31 185 2 5 1289 351 0 0 0 chr15 92403548 92403587 -11091387 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1289 354 312 49 18 chr15 92403597 92403760 -11091214 - L1MA4 LINE L1 -366 5934 5767 5 1289 180 77 0 0 chr15 92403978 92404004 -11090970 + (GAA)n Simple_repeat Simple_repeat 2 27 0 5 1289 1278 54 12 18 chr15 92404013 92404182 -11090792 + B2_Mm2 SINE B2 4 171 -24 5 1289 264 250 125 0 chr15 92404543 92404615 -11090359 - MLT1C LTR MaLR -317 150 70 5 1289 234 0 0 0 chr15 92404848 92404874 -11090100 + (TTG)n Simple_repeat Simple_repeat 1 26 0 5 1290 378 0 0 0 chr15 92406334 92406376 -11088598 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1290 306 67 0 0 chr15 92406380 92406425 -11088549 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 5 1290 510 132 78 55 chr15 92406839 92406967 -11088007 - Lx9 LINE L1 0 7644 7514 5 1290 246 273 12 38 chr15 92407000 92407080 -11087894 + HAL1 LINE L1 2043 2120 -387 5 1290 21 57 0 0 chr15 92408295 92408330 -11086644 + AT_rich Low_complexity Low_complexity 1 35 0 5 1290 21 57 0 0 chr15 92408625 92408660 -11086314 + AT_rich Low_complexity Low_complexity 1 35 0 5 1290 402 21 0 0 chr15 92410454 92410501 -11084473 + (GAAA)n Simple_repeat Simple_repeat 2 48 0 5 1290 213 39 0 0 chr15 92410775 92410801 -11084173 + (CAG)n Simple_repeat Simple_repeat 3 28 0 5 1290 475 226 0 15 chr15 92412745 92412880 -11082094 + (CA)n Simple_repeat Simple_repeat 2 134 0 6 1290 342 146 0 0 chr15 92413048 92413130 -11081844 + (TA)n Simple_repeat Simple_repeat 2 83 0 6 1290 22 0 0 0 chr15 92413289 92413311 -11081663 + AT_rich Low_complexity Low_complexity 1 22 0 6 1290 1197 41 0 7 chr15 92413932 92414081 -11080893 - L1Md_F2 LINE L1 -12 6570 6423 6 1290 231 36 0 0 chr15 92415964 92415992 -11078982 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 6 1290 252 59 0 0 chr15 92416034 92416068 -11078906 + (TA)n Simple_repeat Simple_repeat 1 34 0 6 1290 360 0 0 0 chr15 92417797 92417837 -11077137 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 6 1290 523 210 117 71 chr15 92417902 92418056 -11076918 - B3 SINE B2 0 216 56 6 1290 3203 76 2 20 chr15 92418136 92418541 -11076433 - MTB LTR MaLR 0 400 3 6 1290 341 229 0 0 chr15 92418543 92418604 -11076370 - B3 SINE B2 -154 62 2 6 1290 229 188 0 0 chr15 92418673 92418721 -11076253 + (CTA)n Simple_repeat Simple_repeat 2 49 0 6 1290 294 29 0 0 chr15 92419783 92419818 -11075156 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1290 583 196 0 0 chr15 92419828 92419925 -11075049 - B1_Mur2 SINE Alu -51 98 2 6 1290 494 257 149 10 chr15 92423522 92423730 -11071244 - Tigger7 DNA MER2_type -9 2482 2246 6 1290 359 335 99 22 chr15 92423750 92423973 -11071001 - Tigger7 DNA MER2_type -2101 390 151 6 1290 204 67 0 0 chr15 92424341 92424371 -11070603 + (ACTCG)n Simple_repeat Simple_repeat 2 31 0 6 1290 522 99 59 0 chr15 92424382 92424483 -11070491 + C-rich Low_complexity Low_complexity 3 109 0 6 1290 246 339 9 9 chr15 92424771 92424884 -11070090 - L1MC5 LINE L1 -814 7147 7035 6 1290 23 0 0 0 chr15 92425532 92425555 -11069419 + AT_rich Low_complexity Low_complexity 1 23 0 6 1290 22 35 0 0 chr15 92426577 92426606 -11068368 + AT_rich Low_complexity Low_complexity 1 29 0 6 1290 198 0 0 0 chr15 92428337 92428359 -11066615 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1290 202 182 0 0 chr15 92428429 92428462 -11066512 + polypurine Low_complexity Low_complexity 2 34 0 6 1290 188 34 0 33 chr15 92429423 92429453 -11065521 + (TGGGGG)n Simple_repeat Simple_repeat 5 33 0 6 1290 302 340 0 0 chr15 92430029 92430173 -11064801 + C-rich Low_complexity Low_complexity 1 144 0 6 1290 200 171 0 47 chr15 92430350 92430393 -11064581 + G-rich Low_complexity Low_complexity 2 42 0 6 1290 392 282 8 33 chr15 92431512 92431633 -11063341 + PB1D7 SINE Alu 3 120 0 6 1290 360 0 0 0 chr15 92431770 92431810 -11063164 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1290 529 248 64 0 chr15 92431816 92431941 -11063033 - RSINE1 SINE B4 -31 134 2 6 1290 1686 32 11 0 chr15 92433310 92433499 -11061475 - B2_Mm1t SINE B2 -2 191 1 6 1290 870 118 5 33 chr15 92433868 92434052 -11060922 + CT-rich Low_complexity Low_complexity 1 179 0 6 1290 242 56 0 27 chr15 92434073 92434110 -11060864 + (TCC)n Simple_repeat Simple_repeat 1 36 0 6 1290 570 323 106 26 chr15 92434694 92434996 -11059978 + LTR16A LTR ERVL 19 344 -107 6 1290 358 288 0 12 chr15 92435360 92435441 -11059533 + ID4_ SINE ID 1 80 -3 6 1290 416 321 51 22 chr15 92435538 92435675 -11059299 + RSINE1 SINE B4 2 142 -23 6 1290 396 0 0 0 chr15 92435676 92435720 -11059254 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1290 589 291 57 18 chr15 92437523 92437777 -11057197 - RLTR16 LTR ERVK -234 271 31 6 1290 492 253 42 88 chr15 92438430 92438465 -11056509 - CYRA11_Mm Unknown Y-chromosome -200 417 217 6 1290 1285 164 5 0 chr15 92438465 92438684 -11056290 + URR1A DNA MER1_type 2 221 -5 6 1290 23 0 0 0 chr15 92439595 92439618 -11055356 + AT_rich Low_complexity Low_complexity 1 23 0 6 1290 21 0 0 0 chr15 92440066 92440087 -11054887 + AT_rich Low_complexity Low_complexity 1 21 0 6 1290 21 0 0 0 chr15 92440953 92440974 -11054000 + AT_rich Low_complexity Low_complexity 1 21 0 6 1290 325 340 77 10 chr15 92443196 92443392 -11051582 + MER3 DNA MER1_type 1 209 0 6 1290 2350 122 39 11 chr15 92444197 92444553 -11050421 - IAPLTR1_Mm LTR ERVK -1 366 1 6 1290 9398 31 2 5 chr15 92444555 92445638 -11049336 - IAPEz-int LTR ERVK -2 6479 5400 6 1290 20978 44 32 20 chr15 92445613 92448241 -11046733 - IAPEz-int LTR ERVK -3807 2674 17 6 1290 322 119 56 69 chr15 92448240 92448312 -11046662 - IAPEz-int LTR ERVK -1914 73 3 6 1290 2389 119 39 11 chr15 92448314 92448671 -11046303 - IAPLTR1_Mm LTR ERVK 0 367 1 6 1290 27 49 0 0 chr15 92450275 92450316 -11044658 + AT_rich Low_complexity Low_complexity 1 41 0 6 1290 247 341 0 21 chr15 92450997 92451090 -11043884 + MLT1A1 LTR MaLR 315 405 -3 6 1290 713 246 50 25 chr15 92451095 92451335 -11043639 + B4A SINE B4 9 288 -4 6 1290 2845 166 26 12 chr15 92451510 92452004 -11042970 + Lx2 LINE L1 6497 6997 0 6 1290 877 194 50 25 chr15 92453418 92453619 -11041355 + URR1B DNA MER1_type 19 224 -1 6 1290 743 219 132 32 chr15 92453778 92453967 -11041007 - B3 SINE B2 -4 212 5 6 1290 493 271 8 16 chr15 92456483 92456607 -11038367 + RSINE1 SINE B4 2 124 -41 6 1290 276 169 0 73 chr15 92457358 92457454 -11037520 + T-rich Low_complexity Low_complexity 1 89 0 6 1290 219 36 0 0 chr15 92457472 92457500 -11037474 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 6 1290 320 248 15 41 chr15 92457503 92457595 -11037379 - B1F SINE Alu -22 98 9 6 1290 234 293 35 0 chr15 92457545 92457603 -11037371 - B4A SINE B4 -148 144 85 6 1290 186 174 0 0 chr15 92458152 92458198 -11036776 + CT-rich Low_complexity Low_complexity 2 47 0 6 1290 295 219 64 18 chr15 92458237 92458320 -11036654 - B1F SINE Alu -2 115 40 6 1290 340 227 5 59 chr15 92461289 92461555 -11033419 + (CTCA)n Simple_repeat Simple_repeat 1 251 0 6 1290 233 296 0 43 chr15 92461590 92461774 -11033200 + (CTCA)n Simple_repeat Simple_repeat 3 178 0 6 1290 370 242 18 35 chr15 92461686 92461857 -11033117 + (CA)n Simple_repeat Simple_repeat 2 169 0 6 1290 2461 144 109 113 chr15 92461878 92462409 -11032565 - RLTR24 LTR ERV1 0 529 1 6 1290 336 48 0 0 chr15 92463260 92463302 -11031672 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 1290 270 56 0 0 chr15 92463574 92463610 -11031364 + (T)n Simple_repeat Simple_repeat 1 36 0 6 1290 200 31 0 59 chr15 92465645 92465679 -11029295 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 6 1290 1287 48 0 0 chr15 92465684 92465829 -11029145 - B1_Mus2 SINE Alu -1 146 2 6 1290 196 328 101 29 chr15 92467094 92467232 -11027742 - MIRb SINE MIR -30 238 91 6 1290 279 355 2 12 chr15 92467271 92467431 -11027543 - MIR SINE MIR -25 243 81 6 1290 4870 198 23 33 chr15 92467534 92468553 -11026421 + Lx9 LINE L1 6510 7517 -127 6 1290 214 167 36 18 chr15 92468556 92468611 -11026363 + (CATG)n Simple_repeat Simple_repeat 4 59 0 6 1290 279 198 105 70 chr15 92468612 92468726 -11026248 + Lx9 LINE L1 7516 7633 -11 6 1290 202 29 57 0 chr15 92469021 92469056 -11025918 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 6 1290 211 312 0 20 chr15 92469252 92469301 -11025673 + L2b LINE L2 3308 3355 -20 6 1290 315 0 0 0 chr15 92472017 92472052 -11022922 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1290 1047 109 0 7 chr15 92472052 92472190 -11022784 - B1_Mus1 SINE Alu -10 138 2 6 1290 1722 176 49 32 chr15 92474244 92474591 -11020383 + ORR1B1 LTR MaLR 42 394 0 6 1290 861 216 53 70 chr15 92474988 92475287 -11019687 + Lx7 LINE L1 7385 7678 -18 6 1290 559 257 62 14 chr15 92476450 92476596 -11018378 + ID_B1 SINE B4 64 216 -8 6 1290 622 273 22 78 chr15 92476755 92476934 -11018040 - B3A SINE B2 -13 185 17 6 1290 218 329 96 0 chr15 92476870 92476943 -11018031 - RSINE1 SINE B4 -84 81 2 6 1290 423 0 0 0 chr15 92477092 92477139 -11017835 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1290 1630 185 170 19 chr15 92477329 92477693 -11017281 + MTD LTR MaLR 1 419 0 6 1290 218 288 25 18 chr15 92477730 92477822 -11017152 - MIRb SINE MIR -54 208 117 6 1290 23 0 0 0 chr15 92477886 92477909 -11017065 + AT_rich Low_complexity Low_complexity 1 23 0 6 1290 709 295 145 48 chr15 92478350 92478806 -11016168 + L1M2 LINE L1 4517 5016 -1127 6 1290 927 233 25 54 chr15 92478820 92479024 -11015950 + B3 SINE B2 10 207 -9 6 1290 1940 285 81 11 chr15 92479061 92479878 -11015096 - L1M2c LINE L1 -1686 5099 4226 6 1290 314 326 105 38 chr15 92480369 92480547 -11014427 - L1MEg LINE L1 -4542 1542 1355 6 1290 212 59 0 29 chr15 92480547 92480582 -11014392 + (TTA)n Simple_repeat Simple_repeat 2 35 0 6 1290 314 326 105 38 chr15 92480582 92480747 -11014227 - L1MEg LINE L1 -4730 1354 1177 6 1290 1342 145 0 0 chr15 92480945 92481138 -11013836 - B2_Mm2 SINE B2 -2 193 1 6 1290 262 245 26 26 chr15 92481207 92481358 -11013616 - L1M2c LINE L1 -4834 1955 1805 6 1290 401 287 41 71 chr15 92483518 92483532 -11011442 - RSINE1 SINE B4 0 165 152 6 1290 198 0 0 0 chr15 92483532 92483554 -11011420 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 1290 401 287 41 71 chr15 92483554 92483708 -11011266 - RSINE1 SINE B4 -14 151 2 6 1290 486 0 0 0 chr15 92484368 92484422 -11010552 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1290 232 295 0 0 chr15 92485644 92485705 -11009269 + L3 LINE CR1 4357 4417 -72 6 1290 577 278 148 11 chr15 92485821 92486010 -11008964 + B3 SINE B2 2 216 0 6 1290 1039 237 196 13 chr15 92486045 92486361 -11008613 + ORR1D1 LTR MaLR 1 374 0 6 1290 241 389 46 0 chr15 92487337 92487445 -11007529 + L2b LINE L2 3228 3340 -35 6 1290 30 0 0 0 chr15 92489133 92489163 -11005811 + AT_rich Low_complexity Low_complexity 1 30 0 6 1290 26 64 0 0 chr15 92489606 92489653 -11005321 + AT_rich Low_complexity Low_complexity 1 47 0 6 1290 283 283 98 0 chr15 92489691 92489783 -11005191 + MIRm SINE MIR 1 101 -175 6 1290 770 128 35 6 chr15 92490346 92490519 -11004455 + (TAGA)n Simple_repeat Simple_repeat 2 179 0 6 1290 234 0 0 0 chr15 92490947 92490973 -11004001 + (TC)n Simple_repeat Simple_repeat 2 27 0 6 1290 315 0 0 0 chr15 92490974 92491009 -11003965 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1290 324 0 0 0 chr15 92491799 92491835 -11003139 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1290 439 338 13 0 chr15 92491854 92492008 -11002966 + (TG)n Simple_repeat Simple_repeat 1 156 0 6 1290 230 304 109 51 chr15 92492009 92492165 -11002809 + RLTR22_Mur LTR ERVK 1311 1475 -373 6 1290 674 297 27 5 chr15 92493568 92493754 -11001220 - B3A SINE B2 -8 190 1 6 1290 510 83 0 0 chr15 92494205 92494277 -11000697 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 7 1290 450 358 66 22 chr15 92495146 92495463 -10999511 - Lx8 LINE L1 -61 7412 7082 7 1290 236 54 54 0 chr15 92495511 92495548 -10999426 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 7 1290 771 256 23 11 chr15 92496310 92496484 -10998490 + B3A SINE B2 2 177 -21 7 1290 302 250 26 0 chr15 92496717 92496793 -10998181 + Lx8 LINE L1 6864 6941 -532 7 1290 311 213 16 0 chr15 92496792 92496853 -10998121 + Lx8 LINE L1 7262 7323 -150 7 1290 739 265 109 48 chr15 92496863 92497156 -10997818 + Lx8 LINE L1 6934 7244 -229 7 1290 1098 56 34 27 chr15 92497160 92497176 -10997798 - B1_Mus2 SINE Alu 0 147 135 7 1290 423 0 0 0 chr15 92497176 92497223 -10997751 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 7 1290 1098 56 34 27 chr15 92497223 92497352 -10997622 - B1_Mus2 SINE Alu -13 134 1 7 1290 567 147 266 0 chr15 92497352 92497461 -10997513 - B1_Mus2 SINE Alu -8 139 2 7 1290 294 231 211 90 chr15 92497461 92497485 -10997489 - ID_B1 SINE B4 -8 216 68 7 1290 547 227 181 33 chr15 92497485 92497667 -10997307 + Lx8 LINE L1 7260 7468 -5 7 1290 286 264 96 32 chr15 92497778 92497903 -10997071 + L1MC4 LINE L1 7413 7545 -497 7 1290 314 309 53 53 chr15 92498410 92498598 -10996376 - L1MA7 LINE L1 0 6291 6104 7 1290 226 222 0 0 chr15 92499181 92499226 -10995748 - PB1 SINE Alu -6 121 77 7 1290 2308 138 42 55 chr15 92499349 92499732 -10995242 - ORR1C1 LTR MaLR 0 378 1 7 1290 1764 127 18 63 chr15 92500340 92500675 -10994299 - ORR1A4 LTR MaLR -8 321 2 1 1290 312 278 56 0 chr15 92500727 92500817 -10994157 - PB1D10 SINE Alu -21 96 2 2 1290 214 178 0 0 chr15 92501350 92501395 -10993579 + (TTTG)n Simple_repeat Simple_repeat 1 45 0 3 1290 755 226 7 0 chr15 92501395 92501541 -10993433 - B1_Mur3 SINE Alu -2 147 1 4 1290 689 103 103 0 chr15 92503183 92503299 -10991675 + B2_Mm2 SINE B2 2 129 -66 5 1290 2558 254 59 16 chr15 92504087 92504815 -10990159 - Lx8 LINE L1 -2 7471 6713 6 1290 4427 59 3 32 chr15 92506854 92506886 -10988088 - Lx3_Mus LINE L1 0 7009 6985 7 1290 362 145 0 0 chr15 92506886 92506955 -10988019 - Lx3_Mus LINE L1 0 7009 6941 8 1290 4427 59 3 32 chr15 92506955 92507518 -10987456 - Lx3_Mus LINE L1 -25 6984 6431 7 1290 21 0 0 0 chr15 92507832 92507853 -10987121 + AT_rich Low_complexity Low_complexity 1 21 0 9 1290 193 323 20 50 chr15 92509076 92509177 -10985797 + MER5B DNA MER1_type 74 171 -7 1 1290 2291 105 9 0 chr15 92509192 92509516 -10985458 - ORR1A2 LTR MaLR 0 327 1 1 1290 287 337 47 0 chr15 92510124 92510210 -10984764 + L2b LINE L2 3272 3361 -14 1 1290 342 0 0 0 chr15 92513092 92513130 -10981844 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1290 252 59 0 0 chr15 92513141 92513175 -10981799 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 1290 259 229 16 0 chr15 92513176 92513237 -10981737 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 1290 924 243 161 52 chr15 92513570 92513900 -10981074 - ORR1D2 LTR MaLR -4 366 1 1 1290 186 43 0 0 chr15 92514873 92514896 -10980078 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 1290 530 15 15 0 chr15 92514898 92514965 -10980009 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 1290 35 0 0 0 chr15 92514997 92515032 -10979942 + AT_rich Low_complexity Low_complexity 1 35 0 1 1290 414 121 0 0 chr15 92515915 92515981 -10978993 + (CA)n Simple_repeat Simple_repeat 2 67 0 2 1290 234 62 0 0 chr15 92516522 92516554 -10978420 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1290 733 320 46 28 chr15 92516600 92516883 -10978091 - B4A SINE B4 -3 289 2 2 1290 201 74 0 0 chr15 92516984 92517011 -10977963 + (CACG)n Simple_repeat Simple_repeat 2 28 0 2 1290 282 277 62 21 chr15 92518109 92518205 -10976769 - PB1D10 SINE Alu -6 111 12 2 1290 527 250 26 20 chr15 92518270 92518421 -10976553 - B3 SINE B2 0 216 65 2 1290 4115 44 28 0 chr15 92520720 92521219 -10973755 + L1_Mus1 LINE L1 6055 6567 0 2 1290 357 125 0 0 chr15 92521318 92521374 -10973600 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1290 613 252 84 11 chr15 92521487 92521748 -10973226 + L1MA6 LINE L1 6002 6294 -6 2 1290 26 30 0 0 chr15 92522137 92522170 -10972804 + AT_rich Low_complexity Low_complexity 1 33 0 2 1290 2881 68 15 15 chr15 92522253 92522653 -10972321 + MTB LTR MaLR 1 400 0 3 1290 1313 174 9 0 chr15 92524466 92524690 -10970284 - Lx7 LINE L1 -783 6913 6688 3 1290 1641 200 9 12 chr15 92524694 92525033 -10969941 - ORR1A1 LTR MaLR -8 338 1 3 1290 1880 234 18 13 chr15 92525033 92525414 -10969560 - Lx7 LINE L1 -1004 6692 6310 3 1290 659 309 52 45 chr15 92525555 92525948 -10969026 - RLTR26 LTR ERVK -225 417 2 3 1290 948 214 120 17 chr15 92525964 92526111 -10968863 - Lx7 LINE L1 -1465 6231 6070 3 1290 219 36 0 0 chr15 92526111 92526139 -10968835 + (TC)n Simple_repeat Simple_repeat 2 29 0 3 1290 948 214 120 17 chr15 92526139 92526290 -10968684 - Lx7 LINE L1 -1627 6069 5902 3 1290 990 228 9 14 chr15 92527385 92527607 -10967367 + URR1B DNA MER1_type 5 225 0 3 1290 368 98 33 0 chr15 92528030 92528091 -10966883 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 3 1290 578 227 32 119 chr15 92529411 92529596 -10965378 - B3A SINE B2 -7 191 23 3 1290 633 244 215 6 chr15 92529624 92529801 -10965173 + B3 SINE B2 1 214 -2 3 1290 555 250 204 73 chr15 92530021 92530379 -10964595 + MTE2a LTR MaLR 13 417 -2 3 1290 4714 93 17 48 chr15 92531588 92532363 -10962611 + RMER17A LTR ERVK 1 751 0 4 1290 240 184 0 0 chr15 92534126 92534175 -10960799 + T-rich Low_complexity Low_complexity 1 49 0 4 1290 396 0 0 0 chr15 92535066 92535110 -10959864 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 1290 306 0 0 0 chr15 92535145 92535179 -10959795 + (TC)n Simple_repeat Simple_repeat 2 35 0 4 1290 1560 175 18 72 chr15 92535790 92536266 -10958708 + RMER17C LTR ERVK 16 439 -519 4 1290 799 184 0 0 chr15 92536516 92536663 -10958311 - B1F2 SINE Alu 0 149 3 4 1291 793 194 28 0 chr15 92537717 92537861 -10957113 - B1_Mur2 SINE Alu 0 149 2 4 1291 359 241 28 9 chr15 92538586 92538695 -10956279 + MIR SINE MIR 90 200 -62 4 1291 534 16 0 0 chr15 92538954 92539017 -10955957 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 4 1291 333 82 0 0 chr15 92539246 92539295 -10955679 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1291 234 244 110 58 chr15 92539589 92539780 -10955194 - L1MEe LINE L1 -4009 845 645 4 1291 265 292 45 0 chr15 92540109 92540198 -10954776 - L1MEe LINE L1 -4574 280 188 4 1291 640 288 77 29 chr15 92541261 92541572 -10953402 + L1MC1 LINE L1 5990 6315 -18 5 1291 477 0 0 0 chr15 92541657 92541710 -10953264 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 1291 267 31 0 0 chr15 92541710 92541741 -10953233 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1291 243 211 105 0 chr15 92542625 92542720 -10952254 + Lx5 LINE L1 6944 7048 -2 5 1291 501 17 0 0 chr15 92543077 92543135 -10951839 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 1291 30 45 0 0 chr15 92543244 92543288 -10951686 + AT_rich Low_complexity Low_complexity 1 44 0 5 1291 227 276 80 11 chr15 92543430 92543518 -10951456 + B3 SINE B2 2 95 -121 5 1291 384 147 0 0 chr15 92543540 92543615 -10951359 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 1291 22 56 0 0 chr15 92543678 92543714 -10951260 + AT_rich Low_complexity Low_complexity 1 36 0 5 1291 216 97 0 0 chr15 92543929 92543960 -10951014 + (A)n Simple_repeat Simple_repeat 1 31 0 5 1291 421 283 18 0 chr15 92544883 92544996 -10949978 + PB1D10 SINE Alu 1 115 -2 6 1291 24 0 0 0 chr15 92545910 92545934 -10949040 + AT_rich Low_complexity Low_complexity 1 24 0 6 1291 22 56 0 0 chr15 92546017 92546053 -10948921 + AT_rich Low_complexity Low_complexity 1 36 0 6 1291 945 163 206 0 chr15 92546144 92546328 -10948646 - URR1A DNA MER1_type 0 226 5 6 1291 225 0 0 0 chr15 92547110 92547135 -10947839 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1291 273 98 0 0 chr15 92549786 92549827 -10945147 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1291 261 75 0 0 chr15 92549936 92549976 -10944998 + (CAGA)n Simple_repeat Simple_repeat 3 42 0 6 1291 497 322 7 0 chr15 92550361 92550510 -10944464 + Lx8 LINE L1 7141 7290 -183 6 1291 432 0 0 0 chr15 92550559 92550607 -10944367 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 1291 1048 274 133 10 chr15 92551293 92551908 -10943066 + L1MA8 LINE L1 5268 5965 -326 6 1291 7804 61 18 0 chr15 92552144 92553131 -10941843 - L1_Mus1 LINE L1 -3 6564 5587 7 1291 2586 130 45 38 chr15 92553131 92553603 -10941371 - IAPLTR2_Mm LTR ERVK 0 475 1 7 1291 43643 7 0 4 chr15 92553603 92560123 -10934851 - IAPEz-int LTR ERVK 0 6481 8 7 1291 2584 130 45 38 chr15 92560123 92560595 -10934379 - IAPLTR2_Mm LTR ERVK 0 475 1 7 1291 21688 155 15 100 chr15 92560595 92566326 -10928648 - L1Md_F LINE L1 -317 5569 328 7 1291 469 227 70 8 chr15 92566642 92566771 -10928203 + L1M2 LINE L1 5611 5747 -544 7 1291 1721 281 81 9 chr15 92567723 92568401 -10926573 - L1MA5 LINE L1 -3 6297 5571 7 1291 426 375 13 36 chr15 92569260 92569484 -10925490 + B4A SINE B4 3 221 -71 7 1291 338 316 34 0 chr15 92569486 92569603 -10925371 + RSINE1 SINE B4 2 122 -43 7 1291 549 242 173 6 chr15 92569818 92569997 -10924977 - B3 SINE B2 -7 209 1 7 1291 1689 283 81 44 chr15 92570008 92570785 -10924189 - RLTR40 LTR ERVK -11 806 1 7 1291 955 206 125 81 chr15 92571645 92571878 -10923096 - Lx9 LINE L1 -2 7642 7409 7 1291 809 166 27 14 chr15 92571878 92572025 -10922949 - B1_Mur2 SINE Alu 0 149 1 8 1291 955 206 125 81 chr15 92572025 92572151 -10922823 - Lx9 LINE L1 -236 7408 7267 7 1291 522 335 57 15 chr15 92572543 92572879 -10922095 - MLT1A0 LTR MaLR 0 365 16 8 1291 773 265 180 13 chr15 92574733 92575039 -10919935 - Lx6 LINE L1 -3 7457 7101 8 1291 327 25 0 0 chr15 92575250 92575290 -10919684 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 1291 254 19 54 54 chr15 92576452 92576508 -10918466 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 8 1291 387 89 0 0 chr15 92578088 92578144 -10916830 + (CA)n Simple_repeat Simple_repeat 1 56 0 8 1291 306 0 0 0 chr15 92579311 92579345 -10915629 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 1291 1201 54 0 0 chr15 92579656 92579803 -10915171 + B1_Mus2 SINE Alu 1 147 0 8 1291 239 133 0 22 chr15 92579803 92579849 -10915125 + GA-rich Low_complexity Low_complexity 2 46 0 8 1291 252 0 0 0 chr15 92581497 92581525 -10913449 + (A)n Simple_repeat Simple_repeat 1 28 0 8 1291 187 51 0 93 chr15 92581932 92581975 -10912999 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 9 1291 482 103 0 13 chr15 92583483 92583562 -10911412 + (CCCCCT)n Simple_repeat Simple_repeat 1 78 0 9 1291 315 49 0 0 chr15 92583815 92583856 -10911118 + (A)n Simple_repeat Simple_repeat 1 41 0 9 1291 258 32 0 0 chr15 92584868 92584899 -10910075 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 9 1291 1042 224 128 21 chr15 92586028 92586101 -10908873 - MTD LTR MaLR 0 419 349 9 1291 286 23 0 44 chr15 92586101 92586146 -10908828 + (TCTG)n Simple_repeat Simple_repeat 4 46 0 9 1291 1042 224 128 21 chr15 92586146 92586409 -10908565 - MTD LTR MaLR -71 348 48 9 1291 637 247 35 76 chr15 92587056 92587227 -10907747 + RSINE1 SINE B4 2 165 0 9 1291 672 107 65 0 chr15 92587272 92587440 -10907534 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 9 1291 3394 84 10 14 chr15 92588762 92589245 -10905729 - Lx3B LINE L1 -2 6971 6491 9 1291 233 164 55 0 chr15 92590848 92590903 -10904071 + T-rich Low_complexity Low_complexity 3 60 0 9 1291 1848 172 35 9 chr15 92591440 92591827 -10903147 - MTC LTR MaLR -2 419 24 1 1291 761 315 19 48 chr15 92593719 92594096 -10900878 + Lx9 LINE L1 7105 7470 -174 1 1291 485 222 0 17 chr15 92594096 92594331 -10900643 + (CA)n Simple_repeat Simple_repeat 1 230 0 1 1291 1036 61 0 43 chr15 92594939 92595126 -10899848 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 1 1291 183 42 0 0 chr15 92595129 92595153 -10899821 + (CCTG)n Simple_repeat Simple_repeat 1 24 0 1 1291 622 124 22 71 chr15 92595153 92595336 -10899638 + CT-rich Low_complexity Low_complexity 4 177 0 1 1291 212 202 18 55 chr15 92596132 92596173 -10898801 + (TTTG)n Simple_repeat Simple_repeat 3 43 0 1 1291 303 28 0 0 chr15 92596173 92596209 -10898765 + (TTG)n Simple_repeat Simple_repeat 1 36 0 1 1291 212 202 18 55 chr15 92596209 92596277 -10898697 + (TTTG)n Simple_repeat Simple_repeat 3 66 0 1 1291 1703 121 38 7 chr15 92598521 92598813 -10896161 - MT2C_Mm LTR ERVL 0 475 175 1 1291 1556 189 116 23 chr15 92599154 92599500 -10895474 + RLTR30 LTR ERV1 1 378 -1 1 1291 195 204 0 0 chr15 92601678 92601732 -10893242 + A-rich Low_complexity Low_complexity 1 54 0 1 1291 24 0 0 0 chr15 92602066 92602090 -10892884 + AT_rich Low_complexity Low_complexity 1 24 0 1 1291 4021 51 12 8 chr15 92603192 92603690 -10891284 - L1_Mus2 LINE L1 -1 6565 6066 1 1291 951 204 181 42 chr15 92603793 92604139 -10890835 - MTD LTR MaLR -15 404 6 1 1291 939 158 0 0 chr15 92604188 92604353 -10890621 + CT-rich Low_complexity Low_complexity 1 165 0 1 1291 201 209 0 44 chr15 92604353 92604398 -10890576 + polypyrimidine Low_complexity Low_complexity 1 43 0 1 1291 459 301 72 80 chr15 92607379 92608219 -10886755 + L1M2c LINE L1 1667 2496 -4353 1 1291 359 268 121 8 chr15 92608363 92608487 -10886487 + Lx8 LINE L1 6247 6384 -1089 1 1291 357 24 0 0 chr15 92608890 92608932 -10886042 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1291 351 175 16 0 chr15 92609142 92609205 -10885769 + Lx8 LINE L1 6374 6437 -1036 1 1291 1760 312 23 2 chr15 92609211 92609696 -10885278 + Lx8 LINE L1 6549 7043 -430 1 1291 577 251 193 27 chr15 92609949 92610359 -10884615 + L1M2c LINE L1 3767 4244 -2601 1 1291 308 83 21 0 chr15 92610899 92610947 -10884027 + (CCTG)n Simple_repeat Simple_repeat 2 50 0 1 1291 240 290 14 14 chr15 92611620 92611690 -10883284 + MIR3 SINE MIR 125 194 -14 1 1291 211 122 20 39 chr15 92611711 92611762 -10883212 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 1 1291 952 195 154 0 chr15 92611908 92612103 -10882871 + URR1A DNA MER1_type 1 225 -1 1 1291 669 110 0 0 chr15 92612617 92612726 -10882248 + (GGGGA)n Simple_repeat Simple_repeat 3 111 0 1 1291 500 186 12 0 chr15 92613335 92613421 -10881553 - Lx2B LINE L1 -154 6846 6760 1 1291 1246 68 11 6 chr15 92613455 92613633 -10881341 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1 1291 222 231 0 37 chr15 92613633 92613679 -10881295 + T-rich Low_complexity Low_complexity 1 45 0 1 1291 238 282 95 27 chr15 92613717 92613939 -10881035 - L1_Mur3 LINE L1 -4387 1493 1257 1 1291 635 200 0 77 chr15 92613956 92614086 -10880888 - B1_Mur1 SINE Alu -8 141 22 1 1291 694 281 25 59 chr15 92614404 92614673 -10880301 - MTE2a LTR MaLR -114 265 18 1 1291 354 329 44 73 chr15 92614765 92615037 -10879937 + RMER13A LTR ERVK 16 279 -581 1 1291 246 81 0 0 chr15 92615724 92615761 -10879213 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1291 372 43 0 0 chr15 92616166 92616212 -10878762 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 1291 249 33 0 0 chr15 92616327 92616357 -10878617 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1291 518 115 23 0 chr15 92616516 92616603 -10878371 + (GGGA)n Simple_repeat Simple_repeat 4 92 0 1 1291 1274 73 11 0 chr15 92616603 92616781 -10878193 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 1 1291 387 0 0 0 chr15 92619159 92619202 -10875772 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1291 500 48 233 23 chr15 92620899 92620985 -10873989 + B1_Mm SINE Alu 43 146 -1 1 1291 230 229 0 0 chr15 92621398 92621459 -10873515 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 1 1291 255 230 230 0 chr15 92621896 92621996 -10872978 - L1M5 LINE L1 -432 5808 5686 1 1291 903 302 112 58 chr15 92622281 92622882 -10872092 - L1MB7 LINE L1 -182 6002 5368 1 1291 207 0 0 0 chr15 92622882 92622905 -10872069 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1291 851 302 112 58 chr15 92622905 92622965 -10872009 - L1MB7 LINE L1 -807 5367 5306 1 1291 1235 224 190 75 chr15 92623054 92623571 -10871403 - RMER4B LTR ERVK -9 576 1 1 1291 229 200 89 18 chr15 92623730 92623786 -10871188 - L1M5 LINE L1 -3365 2781 2722 1 1291 2461 49 14 0 chr15 92623922 92624209 -10870765 - L1_Mus1 LINE L1 -1 6566 6276 1 1291 1129 192 81 5 chr15 92625222 92625431 -10869543 - URR1B DNA MER1_type 0 225 1 1 1291 595 186 0 0 chr15 92625675 92625793 -10869181 - Lx9 LINE L1 -1 7643 7526 1 1291 2866 57 17 84 chr15 92626583 92627001 -10867973 + RLTR10 LTR ERVK 1 390 0 1 1291 4460 32 0 3 chr15 92627001 92627627 -10867347 + RLTR10-int LTR ERVK 302 998 -989 1 1291 374 271 31 8 chr15 92627691 92627821 -10867153 + RLTR10-int LTR ERVK 1462 1594 -5987 1 1291 8940 17 2 0 chr15 92627903 92628898 -10866076 + RLTR10-int LTR ERVK 990 1986 -1 1 1291 2848 60 17 84 chr15 92628898 92629316 -10865658 + RLTR10 LTR ERVK 1 390 0 1 1291 311 246 43 0 chr15 92629319 92629388 -10865586 + 5S rRNA rRNA 12 83 -38 1 1291 225 293 52 0 chr15 92629337 92629395 -10865579 + AmnSINE1 SINE SINE 30 90 -485 1 1291 680 247 22 73 chr15 92629661 92629840 -10865134 + B3 SINE B2 40 209 -7 1 1291 619 293 143 24 chr15 92629863 92630735 -10864239 + L1MA4 LINE L1 1959 2953 -3892 1 1291 5835 116 49 2 chr15 92630733 92631629 -10863345 + L1_Mm LINE L1 3401 4338 -1545 1 1291 530 168 74 80 chr15 92631639 92631801 -10863173 + Lx9 LINE L1 6919 7079 -565 1 1291 8597 151 98 24 chr15 92631801 92631966 -10863008 + RLTR22_Mur LTR ERVK 1 177 -1671 1 1291 423 0 0 0 chr15 92631966 92632013 -10862961 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 1291 8597 151 98 24 chr15 92632013 92633062 -10861912 + RLTR22_Mur LTR ERVK 178 1307 -541 1 1291 240 111 0 0 chr15 92633062 92633107 -10861867 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1291 8597 151 98 24 chr15 92633107 92633611 -10861363 + RLTR22_Mur LTR ERVK 1308 1847 -1 1 1291 353 308 165 55 chr15 92633612 92634122 -10860852 + Lx9 LINE L1 7075 7640 -4 1 1291 666 329 89 19 chr15 92634196 92634679 -10860295 + L1MA4 LINE L1 3060 3576 -3269 1 1291 1820 288 132 68 chr15 92634889 92636914 -10858060 + L1MA4 LINE L1 4468 6642 -360 1 1291 23 0 0 0 chr15 92637007 92637030 -10857944 + AT_rich Low_complexity Low_complexity 1 23 0 1 1291 50 0 0 0 chr15 92637062 92637112 -10857862 + AT_rich Low_complexity Low_complexity 1 50 0 1 1291 22 35 0 0 chr15 92637129 92637158 -10857816 + AT_rich Low_complexity Low_complexity 1 29 0 1 1291 301 22 43 0 chr15 92637386 92637432 -10857542 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1291 594 218 89 15 chr15 92637583 92637718 -10857256 + B1_Mur2 SINE Alu 1 145 -4 1 1291 1041 119 0 0 chr15 92637730 92637890 -10857084 + (TA)n Simple_repeat Simple_repeat 1 160 0 1 1291 1011 241 173 49 chr15 92637897 92638342 -10856632 + Lx8 LINE L1 6973 7472 -1 1 1291 225 0 0 0 chr15 92639360 92639385 -10855589 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1291 423 0 0 0 chr15 92640199 92640246 -10854728 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 1291 659 322 84 55 chr15 92641490 92641763 -10853211 - B4A SINE B4 -6 286 6 1 1291 184 274 71 40 chr15 92642001 92642100 -10852874 - MIRc SINE MIR -111 157 56 1 1291 2318 93 89 14 chr15 92642183 92642544 -10852430 + MTC LTR MaLR 12 399 -22 1 1291 441 252 185 22 chr15 92642966 92643193 -10851781 - Lx8 LINE L1 0 7473 7210 1 1291 359 275 115 0 chr15 92643198 92643336 -10851638 + RMER20B LTR ERVK 1 160 -356 1 1291 338 316 110 19 chr15 92643503 92643658 -10851316 - Lx8 LINE L1 -267 7206 7038 1 1291 831 344 16 10 chr15 92643673 92643981 -10850993 - Lx8 LINE L1 -816 6657 6348 1 1291 36225 49 0 3 chr15 92643983 92649581 -10845393 + L1Md_T LINE L1 1 5589 -297 1 1291 9037 32 0 0 chr15 92649581 92650577 -10844397 + L1Md_T LINE L1 5590 6585 0 1 1291 189 0 0 0 chr15 92650600 92650621 -10844353 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1291 569 277 110 3 chr15 92650621 92650855 -10844119 - Lx8 LINE L1 -1113 6360 6096 1 1291 689 267 0 0 chr15 92651155 92651290 -10843684 - B1_Mur1 SINE Alu -5 144 10 1 1291 522 294 134 36 chr15 92651679 92652067 -10842907 + Charlie7 DNA MER1_type 1774 2199 -413 1 1291 21 36 0 0 chr15 92652218 92652246 -10842728 + AT_rich Low_complexity Low_complexity 1 28 0 1 1291 355 299 14 20 chr15 92652321 92652468 -10842506 - MER104 DNA Tc2 0 181 36 1 1291 4598 152 106 9 chr15 92653161 92653976 -10840998 - RMER19B LTR ERVK 0 902 9 1 1291 746 197 7 11 chr15 92654468 92654724 -10840250 + (TCTCTG)n Simple_repeat Simple_repeat 1 255 0 1 1291 368 338 20 47 chr15 92654943 92655092 -10839882 + B1F SINE Alu 3 147 -2 1 1291 459 0 0 0 chr15 92655381 92655432 -10839542 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 1291 468 0 0 0 chr15 92656043 92656095 -10838879 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1291 683 273 12 18 chr15 92657356 92657520 -10837454 + RSINE1 SINE B4 2 164 -1 1 1291 213 175 0 0 chr15 92657531 92657571 -10837403 + GA-rich Low_complexity Low_complexity 4 43 0 1 1291 480 289 53 80 chr15 92657651 92658232 -10836742 + L1_Mm LINE L1 3125 3685 -2461 1 1291 780 89 0 0 chr15 92658232 92658355 -10836619 + (GA)n Simple_repeat Simple_repeat 2 124 0 1 1291 2889 114 24 11 chr15 92658721 92659318 -10835656 + L1_Mm LINE L1 5525 5886 0 1 1291 2812 59 9 0 chr15 92659322 92659662 -10835312 + L1Md_A LINE L1 6239 6581 -1 1 1291 343 277 92 0 chr15 92659699 92659818 -10835156 + L1M5 LINE L1 4516 4645 -1501 1 1291 261 254 0 48 chr15 92659833 92659895 -10835079 + RSINE1 SINE B4 47 105 -60 1 1291 612 276 19 13 chr15 92659981 92660139 -10834835 + B3A SINE B2 2 160 -38 1 1291 435 19 0 0 chr15 92660148 92660200 -10834774 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1291 432 0 0 0 chr15 92660204 92660252 -10834722 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1291 522 287 131 28 chr15 92660382 92660672 -10834302 + L1MC LINE L1 4706 5025 -1121 1 1291 345 299 56 9 chr15 92661288 92661360 -10833614 - PB1D10 SINE Alu 0 117 43 1 1291 240 35 0 0 chr15 92661360 92661389 -10833585 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1291 345 299 56 9 chr15 92661389 92661424 -10833550 - PB1D10 SINE Alu -75 42 6 1 1291 945 276 57 18 chr15 92661692 92662153 -10832821 - Lx9 LINE L1 -1653 5991 5501 1 1291 2537 70 35 6 chr15 92662189 92662507 -10832467 + ORR1A2 LTR MaLR 1 327 0 1 1291 254 173 19 0 chr15 92662622 92662674 -10832300 + Lx9 LINE L1 6191 6243 -1401 1 1291 1309 252 67 27 chr15 92662720 92663168 -10831806 - Lx9 LINE L1 -412 5435 4970 1 1291 2039 310 66 22 chr15 92663173 92664018 -10830956 + Lx9 LINE L1 6496 7377 -267 2 1291 760 245 84 69 chr15 92664190 92664537 -10830437 + L1M5 LINE L1 5315 5666 -513 1 1291 1098 117 81 32 chr15 92665683 92665868 -10829106 + B2_Mm2 SINE B2 2 195 0 2 1291 4530 179 15 26 chr15 92665897 92666749 -10828225 - Lx5 LINE L1 -501 6549 5707 2 1291 2290 221 26 23 chr15 92666720 92667249 -10827725 + Lx5 LINE L1 6513 7043 -7 2 1291 303 271 184 22 chr15 92667352 92667599 -10827375 + L1_Mur3 LINE L1 1210 1514 -4366 2 1291 1145 108 0 6 chr15 92667599 92667776 -10827198 + (GGAGAA)n Simple_repeat Simple_repeat 5 180 0 2 1291 303 271 184 22 chr15 92667776 92667887 -10827087 + L1_Mur3 LINE L1 1515 1625 -4255 2 1292 633 309 27 3 chr15 92667965 92668246 -10826728 - L1MA4A LINE L1 -245 5938 5653 2 1292 238 222 72 24 chr15 92668236 92668319 -10826655 + L1MC LINE L1 5691 5777 -2008 2 1292 185 213 83 21 chr15 92668367 92668415 -10826559 - L2a LINE L2 -71 3355 3305 2 1292 338 0 24 0 chr15 92669172 92669214 -10825760 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1292 260 53 26 0 chr15 92669214 92669252 -10825722 + (TAGA)n Simple_repeat Simple_repeat 2 40 0 2 1292 180 337 195 16 chr15 92669352 92669542 -10825432 - MIRb SINE MIR -10 258 35 2 1292 616 89 20 0 chr15 92670464 92670565 -10824409 + (GGGA)n Simple_repeat Simple_repeat 1 103 0 2 1292 327 290 113 15 chr15 92671328 92671461 -10823513 + MLT1A LTR MaLR 224 369 -5 2 1292 378 360 105 53 chr15 92671574 92671673 -10823301 - MLT2B3 LTR ERVL -63 491 392 2 1292 535 259 178 18 chr15 92671673 92671842 -10823132 + B3A SINE B2 3 198 0 2 1292 378 360 105 53 chr15 92671842 92672209 -10822765 - MLT2B3 LTR ERVL -163 391 1 2 1292 2179 144 45 11 chr15 92672401 92672760 -10822214 + ORR1C2 LTR MaLR 14 384 0 2 1292 207 0 0 0 chr15 92673450 92673473 -10821501 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1292 337 303 80 10 chr15 92673494 92673594 -10821380 - B1F2 SINE Alu -12 137 31 2 1292 769 326 64 51 chr15 92673947 92674399 -10820575 + MLT1C LTR MaLR 2 459 -8 2 1292 288 346 0 0 chr15 92674988 92675066 -10819908 + ID4 SINE ID 2 79 -4 2 1292 679 25 4 3 chr15 92675673 92675760 -10819214 - L1Md_F2 LINE L1 -388 5790 5671 2 1292 6409 52 1 16 chr15 92675760 92676524 -10818450 + L1Md_F2 LINE L1 5819 6571 -11 2 1292 453 208 0 453 chr15 92676524 92676550 -10818424 - L1M5 LINE L1 -598 5702 5682 2 1292 33 25 0 0 chr15 92676556 92676596 -10818378 + AT_rich Low_complexity Low_complexity 1 40 0 2 1292 21 0 0 0 chr15 92677557 92677578 -10817396 + AT_rich Low_complexity Low_complexity 1 21 0 2 1292 594 153 38 8 chr15 92677717 92677849 -10817125 + CT-rich Low_complexity Low_complexity 3 138 0 2 1292 238 276 35 0 chr15 92678118 92678176 -10816798 + (CGTG)n Simple_repeat Simple_repeat 1 60 0 2 1292 27 49 0 0 chr15 92678864 92678905 -10816069 + AT_rich Low_complexity Low_complexity 1 41 0 2 1292 263 281 61 82 chr15 92680998 92681145 -10813829 - Charlie4z DNA MER1_type -9 158 15 2 1292 230 297 0 51 chr15 92681472 92681550 -10813424 - MIRb SINE MIR -18 250 177 2 1292 406 301 17 26 chr15 92682619 92682735 -10812239 - MER58B DNA MER1_type 0 341 227 2 1292 259 364 20 0 chr15 92683525 92683624 -10811350 - MIRb SINE MIR -11 257 157 2 1292 550 123 9 19 chr15 92683775 92683883 -10811091 + G-rich Low_complexity Low_complexity 5 111 0 2 1292 905 309 70 70 chr15 92683914 92684130 -10810844 + Lx8 LINE L1 6783 7018 -455 2 1292 1318 87 46 6 chr15 92684130 92684303 -10810671 + B2_Mm2 SINE B2 2 181 -14 2 1292 905 309 70 70 chr15 92684303 92684724 -10810250 + Lx8 LINE L1 7019 7420 -53 2 1292 25 31 0 0 chr15 92684753 92684785 -10810189 + AT_rich Low_complexity Low_complexity 1 32 0 2 1292 22 0 0 0 chr15 92684865 92684887 -10810087 + AT_rich Low_complexity Low_complexity 1 22 0 2 1292 26 0 0 0 chr15 92686651 92686677 -10808297 + AT_rich Low_complexity Low_complexity 1 26 0 2 1292 183 42 0 0 chr15 92687535 92687559 -10807415 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 1292 4450 98 5 8 chr15 92688416 92689002 -10805972 + MT2B2 LTR ERVL 1 584 0 2 1292 228 83 41 20 chr15 92689564 92689613 -10805361 + (TAA)n Simple_repeat Simple_repeat 1 50 0 2 1292 387 0 0 0 chr15 92690508 92690551 -10804423 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1292 549 80 0 0 chr15 92690902 92690977 -10803997 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 1292 207 0 0 0 chr15 92691742 92691765 -10803209 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 2 1292 246 132 0 0 chr15 92691839 92691892 -10803082 + (A)n Simple_repeat Simple_repeat 1 53 0 2 1292 222 91 0 0 chr15 92692228 92692261 -10802713 + (TC)n Simple_repeat Simple_repeat 1 33 0 2 1292 447 78 0 0 chr15 92692261 92692325 -10802649 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 1292 190 298 0 50 chr15 92692578 92692638 -10802336 + L2 LINE L2 2043 2099 -1320 2 1292 201 119 0 45 chr15 92692656 92692700 -10802274 + T-rich Low_complexity Low_complexity 2 43 0 2 1292 321 342 166 14 chr15 92693300 92693596 -10801378 - L2 LINE L2 -1621 1798 1458 2 1292 27 29 0 0 chr15 92694167 92694201 -10800773 + AT_rich Low_complexity Low_complexity 1 34 0 2 1292 686 207 278 0 chr15 92696312 92696481 -10798493 + B3 SINE B2 1 216 0 2 1292 1224 220 71 0 chr15 92697343 92697639 -10797335 - Lx9 LINE L1 -1 7643 7327 2 1292 528 207 35 35 chr15 92697640 92697755 -10797219 + RMER20B LTR ERVK 1 115 -512 2 1292 237 65 0 0 chr15 92698134 92698165 -10796809 + (TTG)n Simple_repeat Simple_repeat 2 32 0 2 1292 366 23 0 0 chr15 92698166 92698209 -10796765 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1292 4636 228 69 40 chr15 92698213 92698992 -10795982 - Lx9 LINE L1 -338 7306 6521 2 1292 2272 196 44 5 chr15 92698992 92699397 -10795577 - MTC LTR MaLR 0 421 1 2 1292 7422 234 47 49 chr15 92699397 92702036 -10792938 - Lx9 LINE L1 -1124 6520 3718 2 1292 504 225 24 105 chr15 92702037 92702246 -10792728 - Lx7 LINE L1 -1726 5970 5779 2 1292 12095 188 52 68 chr15 92702255 92704228 -10790746 - L1_Mur3 LINE L1 -1680 4200 2220 2 1292 4400 98 19 2 chr15 92704228 92704802 -10790172 - MT2B2 LTR ERVL 0 584 1 2 1292 12095 188 52 68 chr15 92704802 92705881 -10789093 - L1_Mur3 LINE L1 -3661 2219 1199 2 1292 429 20 0 0 chr15 92705881 92705931 -10789043 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1292 1103 246 90 42 chr15 92705931 92706245 -10788729 - L1_Mur3 LINE L1 -6530 1198 861 2 1292 228 204 162 27 chr15 92706494 92706605 -10788369 - L1_Mur3 LINE L1 -7288 440 315 2 1292 353 206 0 0 chr15 92706710 92706778 -10788196 + ORR1D1 LTR MaLR 306 373 -1 2 1292 1879 194 63 12 chr15 92706859 92707271 -10787703 + ORR1D1-int LTR MaLR 24 456 -914 2 1292 290 215 11 168 chr15 92707292 92707387 -10787587 + MER44C DNA MER2_type 647 726 -7 2 1292 756 351 72 43 chr15 92707446 92707863 -10787111 + MT2A LTR ERVL 5 433 -100 2 1292 497 280 8 8 chr15 92708283 92708416 -10786558 - Lx7 LINE L1 -910 6786 6654 2 1292 671 284 30 34 chr15 92708449 92708686 -10786288 - Lx8 LINE L1 -1129 6344 6109 2 1292 5883 60 24 14 chr15 92709266 92709988 -10784986 - L1Md_F2 LINE L1 -7 6575 5847 2 1292 8369 45 1 1 chr15 92710769 92711952 -10783022 - L1Md_F2 LINE L1 0 6582 5400 2 1292 35347 69 2 1 chr15 92712639 92718838 -10776136 - L1Md_F2 LINE L1 0 6582 375 2 1292 222 116 0 0 chr15 92720157 92720200 -10774774 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2 1292 362 275 231 8 chr15 92720690 92720811 -10774163 - RSINE1 SINE B4 -14 151 4 2 1292 486 286 50 80 chr15 92720973 92721212 -10773762 + B4A SINE B4 1 232 -60 2 1292 441 66 0 0 chr15 92721236 92721297 -10773677 + (CA)n Simple_repeat Simple_repeat 1 61 0 2 1292 441 192 201 11 chr15 92721406 92721590 -10773384 + Lx9 LINE L1 7425 7643 -1 2 1292 227 196 0 21 chr15 92722063 92722110 -10772864 + G-rich Low_complexity Low_complexity 5 50 0 2 1292 432 343 46 17 chr15 92722389 92722564 -10772410 - MER21B LTR ERV1 -48 815 636 2 1292 1300 186 160 5 chr15 92722578 92722867 -10772107 + MTD LTR MaLR 85 405 -14 2 1292 436 377 38 19 chr15 92722869 92723080 -10771894 - MER21B LTR ERV1 -239 624 410 2 1292 1921 116 156 3 chr15 92723102 92723430 -10771544 + RLTR44A LTR ERVK 28 405 0 2 1292 342 309 0 0 chr15 92723685 92723769 -10771205 - MER21B LTR ERV1 -779 84 1 2 1292 235 273 73 100 chr15 92723798 92723908 -10771066 + B1F2 SINE Alu 37 143 -6 2 1292 304 326 35 42 chr15 92723926 92724070 -10770904 + HAL1-3A_ME LINE L1 2284 2426 -432 2 1292 1343 42 18 0 chr15 92724529 92724695 -10770279 + L1Md_F2 LINE L1 6414 6582 0 2 1292 411 38 0 0 chr15 92724781 92724834 -10770140 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1292 215 218 0 0 chr15 92725060 92725115 -10769859 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 2 1292 360 0 0 0 chr15 92725514 92725554 -10769420 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1292 689 272 75 46 chr15 92725580 92725819 -10769155 - B4 SINE B4 -8 284 39 2 1292 1012 323 65 27 chr15 92725859 92726445 -10768529 + L1MCa LINE L1 555 1162 -5346 2 1292 231 78 0 89 chr15 92726851 92726907 -10768067 + G-rich Low_complexity Low_complexity 4 54 0 2 1292 22 0 0 0 chr15 92728380 92728402 -10766572 + AT_rich Low_complexity Low_complexity 1 22 0 2 1292 211 98 0 56 chr15 92729074 92729128 -10765846 + A-rich Low_complexity Low_complexity 4 54 0 2 1292 234 231 264 34 chr15 92729654 92729802 -10765172 + L1M2 LINE L1 4871 5052 -1091 2 1292 760 294 9 103 chr15 92729859 92730147 -10764827 - MTC-int LTR MaLR -157 1101 847 2 1292 837 214 87 64 chr15 92730147 92730412 -10764562 + RLTR20B3 LTR ERVK 1 271 -306 2 1292 625 207 44 7 chr15 92730379 92730515 -10764459 + RLTR20B3 LTR ERVK 392 532 -45 2 1292 1431 247 77 52 chr15 92730538 92731147 -10763827 - MTC-int LTR MaLR -478 620 1 2 1292 1400 251 34 20 chr15 92731151 92731500 -10763474 - ORR1D2 LTR MaLR -2 368 15 2 1292 466 200 199 7 chr15 92731558 92731709 -10763265 + L1MB2 LINE L1 5991 6170 -1 2 1292 1138 260 59 20 chr15 92731837 92732241 -10762733 + L1MA5 LINE L1 3660 4079 -2064 2 1292 529 281 7 52 chr15 92732282 92732417 -10762557 + B1F1 SINE Alu 15 143 -6 2 1292 309 236 33 11 chr15 92732433 92732523 -10762451 + L1MA5 LINE L1 5095 5186 -957 2 1292 1183 301 90 24 chr15 92732524 92733147 -10761827 + L1MA5 LINE L1 5637 6300 0 2 1292 297 51 0 0 chr15 92733572 92733611 -10761363 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 2 1292 283 98 16 16 chr15 92735856 92735918 -10759056 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 1292 297 51 0 0 chr15 92735918 92735957 -10759017 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1292 514 82 0 23 chr15 92736098 92736185 -10758789 + (GGAA)n Simple_repeat Simple_repeat 1 85 0 2 1292 213 39 0 0 chr15 92736248 92736274 -10758700 + (TGG)n Simple_repeat Simple_repeat 1 26 0 2 1292 1454 134 4 55 chr15 92736838 92737075 -10757899 - URR1B DNA MER1_type 0 225 1 3 1292 393 254 127 0 chr15 92737287 92737405 -10757569 + L1M5 LINE L1 5528 5660 -519 3 1292 396 0 0 0 chr15 92737968 92738012 -10756962 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1292 321 228 0 0 chr15 92738940 92739019 -10755955 + (CATATA)n Simple_repeat Simple_repeat 6 84 0 3 1292 277 291 38 56 chr15 92739075 92739235 -10755739 - L1M5 LINE L1 -581 5583 5427 3 1292 216 185 0 0 chr15 92739349 92739403 -10755571 + GA-rich Low_complexity Low_complexity 2 55 0 3 1292 446 324 50 60 chr15 92739671 92739970 -10755004 - L1M5 LINE L1 -353 5811 5516 3 1292 314 276 91 43 chr15 92740012 92740183 -10754791 + MLT1B LTR MaLR 25 185 -223 3 1292 486 368 91 31 chr15 92740504 92740989 -10753985 - L1M5 LINE L1 -3169 2977 2464 3 1292 1111 254 99 35 chr15 92741436 92741778 -10753196 + ORR1D2 LTR MaLR 3 366 -4 3 1292 661 294 54 5 chr15 92741779 92741964 -10753010 - B3 SINE B2 -22 194 1 3 1292 23 0 0 0 chr15 92742239 92742262 -10752712 + AT_rich Low_complexity Low_complexity 1 23 0 3 1292 225 178 0 0 chr15 92742779 92742824 -10752150 + G-rich Low_complexity Low_complexity 4 48 0 3 1292 22 35 0 0 chr15 92742987 92743016 -10751958 + AT_rich Low_complexity Low_complexity 1 29 0 3 1292 263 157 200 0 chr15 92743031 92743101 -10751873 + Lx8 LINE L1 7387 7470 -3 3 1292 248 405 19 48 chr15 92743931 92744141 -10750833 - L2c LINE L2 -195 3192 2989 3 1292 3819 43 65 0 chr15 92744225 92744671 -10750303 - MT2C_Mm LTR ERVL 0 475 1 3 1292 236 356 0 38 chr15 92744782 92744887 -10750087 + GA-rich Low_complexity Low_complexity 1 101 0 3 1292 23 0 0 0 chr15 92745912 92745935 -10749039 + AT_rich Low_complexity Low_complexity 1 23 0 3 1292 24 0 0 0 chr15 92747202 92747226 -10747748 + AT_rich Low_complexity Low_complexity 1 24 0 3 1292 213 0 0 75 chr15 92747277 92747317 -10747657 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 1292 257 178 108 14 chr15 92747989 92748063 -10746911 - L1MC4 LINE L1 -611 7431 7351 3 1292 286 280 13 0 chr15 92748539 92748614 -10746360 - B3A SINE B2 -16 182 107 3 1292 1662 31 0 5 chr15 92748802 92748996 -10745978 + L1_Mus1 LINE L1 6375 6567 0 3 1292 23 0 0 0 chr15 92750154 92750177 -10744797 + AT_rich Low_complexity Low_complexity 1 23 0 3 1292 333 0 0 0 chr15 92751858 92751895 -10743079 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1292 375 349 120 0 chr15 92751920 92752112 -10742862 - MER20 DNA MER1_type -4 215 1 3 1292 408 293 80 37 chr15 92752232 92752420 -10742554 + B4A SINE B4 3 198 -94 3 1292 23 0 0 0 chr15 92752563 92752586 -10742388 + AT_rich Low_complexity Low_complexity 1 23 0 3 1292 1687 274 39 31 chr15 92752627 92752994 -10741980 + Lx7 LINE L1 5383 5766 -1694 3 1292 1338 110 11 0 chr15 92752994 92753176 -10741798 - B2_Mm1t SINE B2 -9 184 1 3 1292 2030 293 24 70 chr15 92753176 92754237 -10740737 + Lx7 LINE L1 5767 6734 -962 3 1292 807 197 0 0 chr15 92754251 92754429 -10740545 + (CTA)n Simple_repeat Simple_repeat 1 178 0 3 1292 893 161 0 16 chr15 92754441 92754624 -10740350 + (CTA)n Simple_repeat Simple_repeat 1 180 0 3 1292 627 125 21 0 chr15 92754648 92754744 -10740230 + Lx7 LINE L1 6753 6850 -846 3 1292 580 269 139 24 chr15 92754775 92755026 -10739948 + Lx7 LINE L1 7025 7304 -392 3 1292 260 138 47 70 chr15 92755053 92755139 -10739835 + T-rich Low_complexity Low_complexity 2 85 0 3 1292 367 218 58 0 chr15 92755143 92755230 -10739744 + ORR1D1 LTR MaLR 4 95 -279 3 1292 20363 92 11 12 chr15 92755239 92758892 -10736082 - L1_Mus2 LINE L1 0 6566 2923 3 1292 1485 228 14 24 chr15 92758892 92758982 -10735992 + ORR1D1 LTR MaLR 82 166 -208 3 1292 2422 86 45 3 chr15 92758982 92759296 -10735678 - ORR1A2 LTR MaLR 0 327 1 3 1292 1485 228 14 24 chr15 92759296 92759501 -10735473 + ORR1D1 LTR MaLR 167 374 0 3 1292 30 45 0 0 chr15 92759612 92759656 -10735318 + AT_rich Low_complexity Low_complexity 1 44 0 3 1292 275 372 51 17 chr15 92759892 92760127 -10734847 - Tigger13a DNA MER2_type -49 722 480 3 1292 287 308 75 12 chr15 92760144 92760305 -10734669 - Tigger13a DNA MER2_type -366 405 235 3 1292 443 273 69 42 chr15 92760577 92760902 -10734072 + L1MD LINE L1 5160 5493 -2502 3 1292 551 81 12 0 chr15 92761162 92761248 -10733726 + (CA)n Simple_repeat Simple_repeat 2 88 0 3 1292 453 36 0 0 chr15 92761663 92761718 -10733256 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1292 591 211 14 21 chr15 92761972 92762117 -10732857 + Lx6 LINE L1 7288 7431 -29 3 1292 522 0 0 0 chr15 92762124 92762182 -10732792 + (TAGA)n Simple_repeat Simple_repeat 3 60 0 3 1292 486 0 0 0 chr15 92762186 92762240 -10732734 + (TGAA)n Simple_repeat Simple_repeat 4 57 0 3 1292 8061 67 18 1 chr15 92762364 92763380 -10731594 + Lx LINE L1 5619 6651 -3 3 1292 479 319 30 103 chr15 92763779 92764146 -10730828 + MT2A LTR ERVL 190 529 -4 3 1292 305 299 73 22 chr15 92764392 92764581 -10730393 + MamGypLTR1b LTR Gypsy 565 768 -35 3 1292 224 325 48 12 chr15 92765041 92765125 -10729849 - L2a LINE L2 -2 3424 3338 3 1292 4871 152 101 18 chr15 92765140 92765973 -10729001 - RMER19B LTR ERVK 0 902 1 3 1292 497 339 173 26 chr15 92766930 92767497 -10727477 + L1ME3 LINE L1 5465 6114 -48 3 1292 1273 41 0 7 chr15 92768382 92768530 -10726444 + B1_Mus2 SINE Alu 1 147 0 3 1292 199 294 71 29 chr15 92769115 92769185 -10725789 - MIR3 SINE MIR -129 79 7 3 1292 740 83 9 0 chr15 92769191 92769300 -10725674 + (TTCC)n Simple_repeat Simple_repeat 1 110 0 3 1292 1104 81 23 6 chr15 92769301 92769474 -10725500 + (TTTC)n Simple_repeat Simple_repeat 4 179 0 3 1292 1738 42 0 0 chr15 92769542 92769735 -10725239 + B2_Mm1t SINE B2 1 193 0 3 1292 2097 104 87 18 chr15 92769737 92770069 -10724905 - RMER1B Other Other -9 1057 703 3 1292 336 312 112 0 chr15 92772970 92773095 -10721879 + B1F1 SINE Alu 2 140 -9 3 1292 310 250 16 0 chr15 92773127 92773191 -10721783 + ID4_ SINE ID 4 68 -15 3 1292 452 249 160 36 chr15 92773886 92774136 -10720838 + RMER10A LTR ERVL 162 442 0 3 1292 533 278 22 44 chr15 92774141 92774322 -10720652 - MLT1D LTR MaLR -145 360 184 3 1292 275 373 80 0 chr15 92774484 92774634 -10720340 - MLT1D LTR MaLR -340 165 4 3 1292 363 23 0 0 chr15 92775151 92775195 -10719779 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1292 505 247 157 24 chr15 92775341 92775507 -10719467 - B4A SINE B4 -66 226 39 3 1292 597 327 56 34 chr15 92775846 92776112 -10718862 - LTR52-int LTR ERVL -3150 2535 2264 3 1292 322 311 9 9 chr15 92776497 92776604 -10718370 - LTR52-int LTR ERVL -3628 2057 1951 3 1292 503 304 69 22 chr15 92776605 92776837 -10718137 - LTR52-int LTR ERVL -1723 1833 1591 3 1292 305 351 62 11 chr15 92776899 92777149 -10717825 - LTR52-int LTR ERVL -2076 1480 1276 3 1292 525 299 35 110 chr15 92777455 92777813 -10717161 + ORR1D1 LTR MaLR 1 332 -42 3 1292 443 321 78 60 chr15 92777827 92778264 -10716710 - LTR52-int LTR ERVL -2726 830 386 3 1292 680 314 55 10 chr15 92778277 92778570 -10716404 - LTR52-int LTR ERVL -3196 360 55 3 1292 447 19 0 0 chr15 92778675 92778727 -10716247 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1292 430 294 88 27 chr15 92779031 92779136 -10715838 + RSINE1 SINE B4 10 126 -39 3 1292 996 139 0 0 chr15 92779136 92779308 -10715666 + (CA)n Simple_repeat Simple_repeat 1 172 0 3 1292 430 294 88 27 chr15 92779308 92779349 -10715625 + RSINE1 SINE B4 127 165 0 3 1292 359 246 8 0 chr15 92779357 92779483 -10715491 + (CA)n Simple_repeat Simple_repeat 2 128 0 3 1292 237 236 144 11 chr15 92779514 92779604 -10715370 - LTR52 LTR ERVL -309 112 11 3 1292 454 231 6 23 chr15 92779988 92780161 -10714813 + GA-rich Low_complexity Low_complexity 1 170 0 3 1292 490 292 25 72 chr15 92781099 92781168 -10713806 - L1_Mur3 LINE L1 -2324 3556 3486 3 1292 246 81 0 0 chr15 92781168 92781205 -10713769 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 1292 490 292 25 72 chr15 92781205 92781229 -10713745 - L1_Mur3 LINE L1 -2395 3485 3471 3 1292 198 0 0 0 chr15 92781229 92781251 -10713723 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 3 1292 490 292 25 72 chr15 92781251 92781477 -10713497 - L1_Mur3 LINE L1 -2410 3470 3251 3 1292 1227 90 68 0 chr15 92781478 92781655 -10713319 - B2_Mm1a SINE B2 -3 190 2 3 1292 297 167 0 0 chr15 92781655 92781709 -10713265 + (TTA)n Simple_repeat Simple_repeat 3 56 0 3 1292 343 307 30 9 chr15 92781709 92781892 -10713082 - L1M2 LINE L1 -1676 4464 4250 3 1292 1605 223 63 99 chr15 92781892 92782419 -10712555 + RLTR18B LTR ERVK 1 508 -4 3 1292 1749 216 82 15 chr15 92782449 92782853 -10712121 + RLTR18-int LTR ERVK 3 433 -4928 3 1292 642 301 51 11 chr15 92782920 92783098 -10711876 + RLTR18-int LTR ERVK 2111 2295 -3066 3 1292 983 97 0 0 chr15 92783159 92783293 -10711681 - L1_Mus3 LINE L1 -371 6267 6134 3 1292 2167 88 40 28 chr15 92783294 92783647 -10711327 + L1_Mus3 LINE L1 6282 6638 0 3 1292 1799 204 33 45 chr15 92783650 92784077 -10710897 + RLTR18-int LTR ERVK 2376 2797 -2564 3 1292 1649 181 192 84 chr15 92784080 92784605 -10710369 - RLTR18 LTR ERVK -3 613 32 3 1292 2021 206 14 16 chr15 92784608 92785038 -10709936 + RLTR18-int LTR ERVK 3040 3468 -1893 3 1292 267 266 16 0 chr15 92785039 92785103 -10709871 + RLTR18B LTR ERVK 448 512 0 3 1292 262 238 19 25 chr15 92785115 92785210 -10709764 - L1M2 LINE L1 -1868 4278 4182 3 1292 1318 268 11 25 chr15 92785219 92785579 -10709395 + RMER15 LTR ERVL 203 557 -18 3 1292 686 281 11 11 chr15 92785594 92785781 -10709193 + RMER15-int LTR ERVL 1 187 -4812 3 1292 183 169 45 15 chr15 92785833 92785899 -10709075 + (TTATA)n Simple_repeat Simple_repeat 2 69 0 3 1292 246 81 0 0 chr15 92786004 92786041 -10708933 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1292 411 329 88 71 chr15 92786145 92786384 -10708590 + RMER15-int LTR ERVL 286 528 -4471 3 1292 402 319 0 27 chr15 92786469 92786617 -10708357 + Lx7 LINE L1 6784 6927 -769 3 1292 1038 281 38 46 chr15 92786635 92787130 -10707844 + Lx7 LINE L1 7016 7668 -28 3 1292 1344 281 97 39 chr15 92787147 92788071 -10706903 - L1M2 LINE L1 -2816 3327 2320 3 1292 794 28 151 0 chr15 92788126 92788232 -10706742 - L1Md_A LINE L1 -16 6566 6445 3 1292 220 365 0 0 chr15 92788239 92788302 -10706672 + B3A SINE B2 2 64 -134 3 1292 897 314 69 18 chr15 92788661 92788993 -10705981 - L1M4 LINE L1 -796 5350 5006 3 1292 2709 83 35 17 chr15 92788993 92789397 -10705577 - RLTR10A LTR ERVK 0 411 1 3 1292 897 314 69 18 chr15 92789397 92789632 -10705342 - L1M4 LINE L1 -1141 5005 4754 3 1292 351 286 30 20 chr15 92790404 92790504 -10704470 - B1F2 SINE Alu -48 101 1 3 1292 321 321 63 19 chr15 92791362 92791521 -10703453 + MLT1B LTR MaLR 210 375 -15 3 1292 181 114 91 0 chr15 92792051 92792095 -10702879 + (CATG)n Simple_repeat Simple_repeat 3 50 0 3 1292 1440 297 93 8 chr15 92792314 92792409 -10702565 - Lx8 LINE L1 -28 7445 7335 3 1292 297 0 0 0 chr15 92792409 92792442 -10702532 + (TTG)n Simple_repeat Simple_repeat 1 33 0 3 1292 1440 297 93 8 chr15 92792442 92792936 -10702038 - Lx8 LINE L1 -139 7334 6808 3 1292 1554 221 64 27 chr15 92794548 92794952 -10700022 - MTD LTR MaLR 0 419 1 3 1292 3855 246 73 39 chr15 92794952 92796169 -10698805 - MTD-int LTR MaLR 0 1258 1 3 1292 787 294 24 92 chr15 92796209 92796384 -10698590 - MTD LTR MaLR -105 314 136 3 1292 2070 97 26 56 chr15 92796384 92796723 -10698251 - ORR1A4 LTR MaLR 0 329 1 3 1292 787 294 24 92 chr15 92796723 92796786 -10698188 - MTD LTR MaLR -284 135 89 3 1292 1092 89 7 7 chr15 92796786 92796933 -10698041 - B1_Mus1 SINE Alu -1 147 1 3 1292 787 294 24 92 chr15 92796933 92797030 -10697944 - MTD LTR MaLR -331 88 1 3 1292 644 67 11 0 chr15 92797169 92797259 -10697715 + (GAAA)n Simple_repeat Simple_repeat 4 94 0 3 1292 423 0 0 0 chr15 92797259 92797306 -10697668 + (GGGA)n Simple_repeat Simple_repeat 1 47 0 3 1292 634 195 81 0 chr15 92797353 92797476 -10697498 - B1_Mur1 SINE Alu -11 138 6 3 1292 269 333 98 0 chr15 92797480 92797582 -10697392 - MTEb LTR MaLR 0 379 268 3 1292 717 208 0 0 chr15 92797582 92797814 -10697160 + (TG)n Simple_repeat Simple_repeat 1 232 0 3 161 3220 48 10 2 chr15 92798609 92799006 -10695968 - MTB LTR MaLR 0 400 1 3 1293 1033 97 0 41 chr15 92799006 92799200 -10695774 - MTB-int LTR MaLR 0 1098 913 3 1293 441 0 0 0 chr15 92799895 92799944 -10695030 + (CTG)n Simple_repeat Simple_repeat 1 49 0 4 1293 782 130 12 54 chr15 92800089 92800264 -10694710 + Lx LINE L1 6478 6631 -5 4 1293 212 86 29 0 chr15 92800265 92800300 -10694674 + (GGA)n Simple_repeat Simple_repeat 3 38 0 4 1293 3331 134 84 9 chr15 92801831 92802470 -10692504 - MTB-int LTR MaLR -191 1067 381 4 1293 7497 42 3 4 chr15 92802487 92803389 -10691585 - L1Md_F3 LINE L1 -1 6583 5683 4 1293 2533 100 0 3 chr15 92803391 92803781 -10691193 - MTB-int LTR MaLR -709 389 1 4 1293 2640 43 137 17 chr15 92803781 92804138 -10690836 - MTB LTR MaLR 0 400 1 4 1293 225 0 0 0 chr15 92804186 92804211 -10690763 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1293 211 93 23 23 chr15 92804830 92804874 -10690100 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 1293 1186 238 17 28 chr15 92804889 92805179 -10689795 + B4A SINE B4 5 291 -1 4 1293 758 213 116 24 chr15 92805253 92805460 -10689514 + URR1A DNA MER1_type 1 226 0 4 1293 760 144 36 36 chr15 92806059 92806158 -10688816 - RMER2 LTR ERV1 0 567 468 4 1293 258 32 0 0 chr15 92806158 92806189 -10688785 + (CCCCCA)n Simple_repeat Simple_repeat 5 35 0 4 1293 760 144 36 36 chr15 92806189 92806226 -10688748 - RMER2 LTR ERV1 -100 467 431 4 1293 259 234 52 0 chr15 92806845 92806922 -10688052 + L1MA6 LINE L1 6075 6155 -145 4 1293 1098 82 7 20 chr15 92807437 92807575 -10687399 + B1_Mus1 SINE Alu 1 139 -9 4 1293 261 0 0 0 chr15 92807575 92807604 -10687370 + (CAA)n Simple_repeat Simple_repeat 2 30 0 4 1293 423 0 0 0 chr15 92809153 92809200 -10685774 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 1293 415 323 142 12 chr15 92810431 92810685 -10684289 + B4A SINE B4 2 288 -4 4 1293 188 111 28 0 chr15 92811563 92811599 -10683375 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1293 379 222 0 8 chr15 92811658 92811906 -10683068 + (TG)n Simple_repeat Simple_repeat 1 245 0 4 1293 315 132 0 0 chr15 92813096 92813164 -10681810 + (A)n Simple_repeat Simple_repeat 1 68 0 4 1293 1389 291 39 61 chr15 92815619 92816136 -10678838 + Lx8 LINE L1 6730 7245 -228 4 1293 1204 185 4 13 chr15 92816136 92816361 -10678613 + URR1B DNA MER1_type 1 223 -2 4 1293 1389 291 39 61 chr15 92816361 92816466 -10678508 + Lx8 LINE L1 7246 7338 -135 4 1293 2183 91 3 16 chr15 92816495 92816818 -10678156 + ORR1A2 LTR MaLR 1 319 -8 4 1293 1206 61 0 0 chr15 92817226 92817373 -10677601 + B1_Mus1 SINE Alu 2 148 0 4 1293 234 292 125 0 chr15 92817661 92817733 -10677241 - RSINE1 SINE B4 -27 138 58 4 1293 344 294 40 32 chr15 92817814 92818017 -10676957 + MER31A LTR ERV1 109 312 -154 4 1293 192 77 0 0 chr15 92818320 92818346 -10676628 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1293 786 231 119 85 chr15 92818526 92818880 -10676094 + ORR1D2 LTR MaLR 5 370 0 4 1293 273 280 11 11 chr15 92819213 92819307 -10675667 + L1M5 LINE L1 5557 5650 -529 4 1293 328 335 42 37 chr15 92819328 92819517 -10675457 - MLT1D LTR MaLR -28 477 288 4 1293 1252 119 114 0 chr15 92820201 92820403 -10674571 + URR1A DNA MER1_type 1 225 -1 4 1293 895 119 110 29 chr15 92820562 92820735 -10674239 + B2_Mm2 SINE B2 1 187 -8 4 1293 2835 67 0 0 chr15 92821333 92821679 -10673295 - ORR1A1 LTR MaLR 0 346 1 4 1293 14045 55 8 3 chr15 92821679 92823462 -10671512 - ORR1A1-int LTR MaLR 0 1792 1 4 1293 2842 61 0 0 chr15 92823462 92823808 -10671166 - ORR1A1 LTR MaLR 0 346 1 4 1293 320 83 0 0 chr15 92823808 92823856 -10671118 - ORR1A2 LTR MaLR -279 48 1 4 1293 23 0 0 0 chr15 92824186 92824209 -10670765 + AT_rich Low_complexity Low_complexity 1 23 0 4 1293 293 0 0 26 chr15 92824470 92824508 -10670466 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 4 1293 234 0 0 0 chr15 92825366 92825392 -10669582 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4 1293 303 317 100 62 chr15 92826038 92826378 -10668596 + ORR1E LTR MaLR 1 353 -6 4 1293 1890 109 104 71 chr15 92826386 92826781 -10668193 - RMER17C LTR ERVK 0 410 3 4 1293 558 270 7 20 chr15 92827199 92827350 -10667624 - RSINE1 SINE B4 0 165 17 4 1293 581 230 30 0 chr15 92827801 92827936 -10667038 + B1F SINE Alu 1 139 -10 4 1293 180 0 0 0 chr15 92827936 92827956 -10667018 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 4 1293 183 80 0 0 chr15 92828681 92828706 -10666268 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1293 593 69 11 0 chr15 92830998 92831085 -10663889 + (GGAA)n Simple_repeat Simple_repeat 4 91 0 4 1293 3339 49 2 2 chr15 92831509 92831916 -10663058 - MTB_Mm LTR MaLR 0 407 1 4 1293 436 276 94 6 chr15 92831985 92832156 -10662818 + MLT1D LTR MaLR 301 486 -19 4 1293 394 264 55 16 chr15 92833146 92833273 -10661701 + B3 SINE B2 84 215 -1 4 1293 21 0 0 0 chr15 92833273 92833294 -10661680 + AT_rich Low_complexity Low_complexity 1 21 0 4 1293 547 214 351 5 chr15 92833317 92833519 -10661455 + Lx8 LINE L1 7197 7468 -5 4 1293 497 286 95 0 chr15 92833548 92833695 -10661279 + RSINE1 SINE B4 4 164 -1 4 1293 436 279 142 0 chr15 92833789 92833972 -10661002 - B3 SINE B2 -5 211 3 4 1293 566 51 0 13 chr15 92834006 92834085 -10660889 + (GGAA)n Simple_repeat Simple_repeat 4 81 0 4 1293 407 247 0 0 chr15 92834107 92834196 -10660778 - B3A SINE B2 -109 89 1 4 1293 186 43 0 0 chr15 92835462 92835485 -10659489 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 4 1293 325 222 0 53 chr15 92835488 92835564 -10659410 - RSINE1 SINE B4 -59 106 35 4 1293 1253 103 29 0 chr15 92835660 92835835 -10659139 + B2_Mm1t SINE B2 1 180 -13 4 1293 334 69 350 39 chr15 92835880 92835983 -10658991 + B2_Mm2 SINE B2 47 181 -14 4 1293 480 305 68 104 chr15 92836987 92837313 -10657661 + MLT1B LTR MaLR 22 335 -55 4 1293 606 283 89 64 chr15 92837641 92837954 -10657020 - MER2 DNA MER2_type 0 345 25 4 1293 426 205 24 0 chr15 92838347 92838430 -10656544 + B1_Mur3 SINE Alu 4 88 -61 4 1293 2182 92 3 144 chr15 92838459 92838840 -10656134 - ORR1A2 LTR MaLR 0 327 1 4 1293 1089 281 74 58 chr15 92841350 92841920 -10653054 - Charlie1a DNA MER1_type -8 1447 869 4 1293 255 125 0 0 chr15 92843475 92843515 -10651459 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 1293 180 0 0 0 chr15 92843515 92843535 -10651439 + (ATG)n Simple_repeat Simple_repeat 1 20 0 4 1293 327 170 105 11 chr15 92843700 92843795 -10651179 - Lx9 LINE L1 0 7644 7541 4 1293 246 32 0 0 chr15 92843797 92843828 -10651146 + (TTG)n Simple_repeat Simple_repeat 2 32 0 4 1293 396 0 0 0 chr15 92843840 92843884 -10651090 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1293 5326 190 64 14 chr15 92843884 92844531 -10650443 - Lx9 LINE L1 -168 7476 6775 4 1293 4604 6 0 0 chr15 92844531 92845024 -10649950 + MT2_Mm LTR ERVL 1 493 0 4 1293 5326 190 64 14 chr15 92845024 92845422 -10649552 - Lx9 LINE L1 -870 6774 6379 4 1293 265 310 0 0 chr15 92845432 92845519 -10649455 + (CATATA)n Simple_repeat Simple_repeat 3 89 0 4 1293 1425 69 11 0 chr15 92845564 92845752 -10649222 - B2_Mm1t SINE B2 -3 190 1 4 1293 1229 187 32 28 chr15 92845881 92846134 -10648840 + Lx9 LINE L1 5467 5720 -127 4 1293 520 212 8 8 chr15 92846134 92846267 -10648707 + (TG)n Simple_repeat Simple_repeat 1 133 0 4 1293 929 250 39 12 chr15 92846267 92846522 -10648452 + Lx9 LINE L1 5767 6028 -1616 4 1293 245 303 58 39 chr15 92847917 92848020 -10646954 + MT2B LTR ERVL 159 263 -338 4 1293 507 218 105 0 chr15 92847934 92848058 -10646916 + B1_Mur1 SINE Alu 12 148 -1 4 1293 679 226 20 7 chr15 92849129 92849276 -10645698 + Lx9 LINE L1 493 641 -6967 4 1293 395 186 61 10 chr15 92849276 92849374 -10645600 + MT2A LTR ERVL 1 103 -430 4 1293 432 0 0 0 chr15 92849563 92849611 -10645363 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 4 1293 2555 211 64 12 chr15 92850032 92850626 -10644348 + Lx9 LINE L1 640 1264 -6344 4 1293 4261 182 41 39 chr15 92850623 92851667 -10643307 + L1_Rod LINE L1 1334 2379 -3468 4 1293 6593 221 67 51 chr15 92851700 92853786 -10641188 + Lx9 LINE L1 5471 7618 -26 4 1293 285 221 0 0 chr15 92853808 92853876 -10641098 + GA-rich Low_complexity Low_complexity 2 69 0 4 1293 468 81 0 0 chr15 92853876 92853950 -10641024 + (CAGG)n Simple_repeat Simple_repeat 2 75 0 4 1293 328 155 20 20 chr15 92854465 92854564 -10640410 + (TCTCTG)n Simple_repeat Simple_repeat 2 100 0 4 1293 262 275 236 9 chr15 92855337 92855447 -10639527 + B1F SINE Alu 8 142 -7 4 1293 232 259 12 0 chr15 92856229 92856310 -10638664 + (TTA)n Simple_repeat Simple_repeat 2 83 0 4 1293 191 170 21 0 chr15 92857965 92858012 -10636962 + T-rich Low_complexity Low_complexity 3 50 0 4 1293 251 264 150 30 chr15 92858017 92858150 -10636824 - PB1D10 SINE Alu 0 149 1 4 1293 258 224 35 0 chr15 92858097 92858155 -10636819 - B4 SINE B4 -152 140 81 4 1293 358 268 130 0 chr15 92858464 92858602 -10636372 + MLT1D LTR MaLR 350 505 0 4 1293 201 305 0 17 chr15 92859068 92859128 -10635846 + GA-rich Low_complexity Low_complexity 2 60 0 4 1293 245 158 25 38 chr15 92859456 92859535 -10635439 + CT-rich Low_complexity Low_complexity 6 83 0 4 1293 1301 143 247 3 chr15 92859724 92860011 -10634963 - ORR1B2 LTR MaLR -8 359 3 4 1293 1202 69 0 0 chr15 92860283 92860428 -10634546 + B1_Mus2 SINE Alu 3 147 0 4 1293 207 0 0 0 chr15 92860879 92860902 -10634072 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 4 1293 180 275 0 38 chr15 92861047 92861100 -10633874 + L2 LINE L2 2685 2735 -684 4 1293 362 278 96 23 chr15 92861200 92861377 -10633597 + L1ME3A LINE L1 5398 5587 -586 4 1293 468 292 12 58 chr15 92861387 92861558 -10633416 - MTEa LTR MaLR -12 367 205 4 1293 365 296 61 44 chr15 92861947 92862127 -10632847 + L1ME3A LINE L1 5943 6125 -48 4 1293 3081 129 88 22 chr15 92862171 92862719 -10632255 + RMER4B LTR ERVK 2 585 0 4 1293 709 283 43 96 chr15 92862978 92863376 -10631598 + MTE2a LTR MaLR 1 377 -2 4 1293 441 0 0 0 chr15 92863468 92863517 -10631457 + (TC)n Simple_repeat Simple_repeat 1 49 0 4 1293 882 52 0 0 chr15 92863517 92863632 -10631342 + (CA)n Simple_repeat Simple_repeat 1 116 0 4 1293 1545 233 47 61 chr15 92863768 92864176 -10630798 - RMER19C LTR ERVK 0 611 203 4 1293 6670 49 1 6 chr15 92864176 92864993 -10629981 - L1Md_F2 LINE L1 -2 6580 5768 4 1293 1545 233 47 61 chr15 92864993 92865077 -10629897 - RMER19C LTR ERVK -409 202 126 4 1293 954 249 118 82 chr15 92865118 92865482 -10629492 - MTEa LTR MaLR 0 379 3 4 1293 816 244 147 11 chr15 92865484 92865757 -10629217 - MTEa-int LTR MaLR 0 1580 1271 4 1293 2818 126 34 1 chr15 92865761 92866330 -10628644 + ORR1A3-int LTR MaLR 1001 1771 -192 5 1293 2464 125 81 2 chr15 92867307 92867701 -10627273 - Lx4B LINE L1 -11 7047 6623 5 1293 15395 110 96 19 chr15 92867701 92868733 -10626241 - L1_Mur2 LINE L1 -21 5856 4743 5 1293 2913 46 3 0 chr15 92868733 92869078 -10625896 - ORR1A1 LTR MaLR 0 346 1 5 1293 15395 110 96 19 chr15 92869078 92869464 -10625510 - L1_Mur2 LINE L1 -1135 4742 4282 5 1293 198 0 0 0 chr15 92869464 92869486 -10625488 + (TTG)n Simple_repeat Simple_repeat 2 23 0 5 1293 15395 110 96 19 chr15 92869486 92869561 -10625413 - L1_Mur2 LINE L1 -1596 4281 4214 5 1293 1195 56 0 0 chr15 92869561 92869705 -10625269 - B1_Mus1 SINE Alu 0 148 5 5 1293 15395 110 96 19 chr15 92869705 92870397 -10624577 - L1_Mur2 LINE L1 -1664 4213 3472 5 1293 198 0 0 0 chr15 92870397 92870419 -10624555 + (TTG)n Simple_repeat Simple_repeat 2 23 0 5 1293 15395 110 96 19 chr15 92870419 92870768 -10624206 - L1_Mur2 LINE L1 -2406 3471 3124 5 1293 459 0 0 0 chr15 92871278 92871329 -10623645 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 1293 21 0 0 0 chr15 92871378 92871399 -10623575 + AT_rich Low_complexity Low_complexity 1 21 0 5 1293 276 325 78 22 chr15 92871626 92871897 -10623077 + L1_Rod LINE L1 1569 1854 -3993 5 1293 1383 335 63 11 chr15 92872238 92873060 -10621914 + L1M2 LINE L1 2131 2995 -3148 5 1293 370 288 42 66 chr15 92873144 92873356 -10621618 + Lx7 LINE L1 6029 6235 -1461 5 1293 670 207 12 0 chr15 92873387 92873556 -10621418 + GA-rich Low_complexity Low_complexity 3 173 0 5 1293 461 285 14 35 chr15 92873600 92873742 -10621232 - Lx8 LINE L1 -1036 6437 6299 5 1293 41957 5 0 0 chr15 92874506 92881082 -10613892 - L1Md_A LINE L1 0 6582 7 5 1293 234 286 75 67 chr15 92882630 92882750 -10612224 + L1M2 LINE L1 2721 2841 -3302 5 1293 246 213 25 74 chr15 92883731 92883812 -10611162 - MER112 DNA MER1_type -169 92 16 5 1293 2286 115 9 0 chr15 92884014 92884337 -10610637 + ORR1A3 LTR MaLR 1 326 0 5 1293 31443 37 0 3 chr15 92885795 92892230 -10602744 - L1Md_T LINE L1 0 6585 73 5 1293 387 0 0 0 chr15 92892624 92892667 -10602307 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 1293 836 212 17 113 chr15 92894776 92894968 -10600006 - B3 SINE B2 0 216 40 5 1293 261 0 0 0 chr15 92894968 92894997 -10599977 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 1293 1139 57 0 14 chr15 92895002 92895145 -10599829 - B1_Mus1 SINE Alu -5 143 3 5 1293 836 212 17 113 chr15 92895145 92895185 -10599789 - B3 SINE B2 -177 39 1 5 1293 1676 129 157 35 chr15 92895539 92895908 -10599066 - MTD LTR MaLR 0 419 6 5 1293 233 305 12 0 chr15 92896056 92896138 -10598836 + ID4_ SINE ID 1 83 0 5 1293 2797 250 52 29 chr15 92896311 92897195 -10597779 + Lx7 LINE L1 5546 6457 -1239 5 1293 277 260 232 16 chr15 92897392 92897517 -10597457 - RMER15 LTR ERVL -70 505 354 5 1293 215 170 21 0 chr15 92898558 92898605 -10596369 + T-rich Low_complexity Low_complexity 2 49 0 5 1293 306 0 0 0 chr15 92898647 92898681 -10596293 + (TC)n Simple_repeat Simple_repeat 1 34 0 5 1293 372 119 0 0 chr15 92898681 92898739 -10596235 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 1293 256 143 0 0 chr15 92899902 92899944 -10595030 - RMER30 DNA MER1_type -153 49 8 5 1293 414 288 98 52 chr15 92900331 92900968 -10594006 - L1M5 LINE L1 -568 5605 4887 5 1293 618 289 22 30 chr15 92901293 92901579 -10593395 - L1MA4 LINE L1 -393 5907 5614 5 1293 1208 202 0 0 chr15 92902371 92902574 -10592400 + B3 SINE B2 1 203 -13 5 1293 251 337 138 66 chr15 92902715 92903032 -10591942 + L2 LINE L2 2041 2409 -1010 5 1293 539 0 30 0 chr15 92903032 92903098 -10591876 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 5 1293 251 337 138 66 chr15 92903098 92903521 -10591453 + L2 LINE L2 2410 2834 -585 5 1293 1553 198 132 15 chr15 92903567 92903900 -10591074 - ORR1D1 LTR MaLR 0 374 3 5 1293 609 14 0 0 chr15 92904110 92904180 -10590794 + (CTATT)n Simple_repeat Simple_repeat 4 73 0 5 1293 334 195 11 11 chr15 92905407 92905495 -10589479 + (TA)n Simple_repeat Simple_repeat 2 89 0 5 1293 286 308 0 0 chr15 92905982 92906060 -10588914 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 1293 345 371 89 28 chr15 92906737 92907275 -10587699 - L1MEf LINE L1 -4796 1404 834 5 1293 483 250 96 0 chr15 92907692 92907828 -10587146 - Lx8 LINE L1 -179 7294 7146 5 1293 360 0 0 0 chr15 92907829 92907869 -10587105 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 5 1293 345 159 0 0 chr15 92907999 92908062 -10586912 + CT-rich Low_complexity Low_complexity 3 65 0 5 1293 22 70 0 0 chr15 92908121 92908164 -10586810 + AT_rich Low_complexity Low_complexity 1 43 0 5 1293 258 319 0 32 chr15 92908272 92908395 -10586579 + ID_B1 SINE B4 99 217 -7 5 1293 249 264 19 0 chr15 92908412 92908465 -10586509 + ID4_ SINE ID 4 57 -26 5 1293 628 301 136 69 chr15 92908559 92908919 -10586055 + MT2A LTR ERVL 1 384 -149 5 1293 561 270 72 50 chr15 92908937 92909214 -10585760 + L1M2 LINE L1 5254 5536 -755 5 1293 290 247 59 0 chr15 92909230 92909315 -10585659 + L1M2 LINE L1 5711 5800 -491 5 1293 676 254 52 30 chr15 92909635 92909866 -10585108 + RMER20B LTR ERVK 234 469 -158 5 1293 459 48 0 0 chr15 92909872 92909934 -10585040 + (CCA)n Simple_repeat Simple_repeat 1 62 0 5 1293 209 194 0 0 chr15 92910538 92910574 -10584400 + T-rich Low_complexity Low_complexity 1 36 0 5 1293 2912 32 0 0 chr15 92910583 92910923 -10584051 - L1Md_F2 LINE L1 -12 6570 6231 5 1293 819 0 0 0 chr15 92911446 92911537 -10583437 + (GAAAA)n Simple_repeat Simple_repeat 1 91 0 5 1293 383 36 36 0 chr15 92911537 92911593 -10583381 + (GGGGA)n Simple_repeat Simple_repeat 4 61 0 5 1293 831 229 198 3 chr15 92912202 92912505 -10582469 - ORR1D2 LTR MaLR -6 364 3 5 1293 296 301 22 5 chr15 92912816 92912938 -10582036 - MER5A DNA MER1_type -53 136 15 5 1293 180 0 0 0 chr15 92913621 92913641 -10581333 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1293 1348 192 0 0 chr15 92913918 92914142 -10580832 + URR1B DNA MER1_type 2 225 0 5 1293 823 45 18 0 chr15 92915132 92915244 -10579730 + (TAGA)n Simple_repeat Simple_repeat 4 117 0 5 1293 216 0 0 0 chr15 92916910 92916934 -10578040 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1293 552 194 0 0 chr15 92917526 92917655 -10577319 + (CA)n Simple_repeat Simple_repeat 2 130 0 5 1293 282 260 199 34 chr15 92917936 92918203 -10576771 - Arthur1B DNA Tip100 -90 1135 825 5 1293 489 299 19 45 chr15 92918210 92918364 -10576610 + RSINE1 SINE B4 16 165 0 5 1293 347 310 36 60 chr15 92918418 92918586 -10576388 + RSINE1 SINE B4 2 165 0 5 1293 300 154 0 0 chr15 92918591 92918643 -10576331 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1293 892 151 0 20 chr15 92918654 92918905 -10576069 + (CA)n Simple_repeat Simple_repeat 1 245 0 5 1293 689 331 175 15 chr15 92919045 92919588 -10575386 - Arthur1B DNA Tip100 -594 631 2 5 1293 449 319 78 0 chr15 92920861 92921052 -10573922 - MLT1A0 LTR MaLR -9 356 151 5 1293 219 158 0 50 chr15 92921061 92921100 -10573874 + (TTA)n Simple_repeat Simple_repeat 3 40 0 5 1293 1196 54 7 0 chr15 92921100 92921247 -10573727 - B1_Mus1 SINE Alu 0 148 1 5 1293 219 158 0 50 chr15 92921247 92921267 -10573707 + (TTA)n Simple_repeat Simple_repeat 2 20 0 5 1293 342 98 0 0 chr15 92921267 92921318 -10573656 + (CCA)n Simple_repeat Simple_repeat 2 52 0 5 1293 366 321 18 9 chr15 92921330 92921443 -10573531 - PB1 SINE Alu -13 114 1 5 1293 291 233 82 49 chr15 92921514 92921636 -10573338 - MLT1A0 LTR MaLR -239 126 1 5 1293 8207 77 13 1 chr15 92922113 92923438 -10571536 - L1_Mus3 LINE L1 -1 6637 5288 5 1293 333 185 89 0 chr15 92923811 92923946 -10571028 + (CTGGGG)n Simple_repeat Simple_repeat 1 147 0 5 1293 293 200 67 39 chr15 92924003 92924107 -10570867 + RMER13B LTR ERVK 802 908 0 5 1293 424 160 108 45 chr15 92924107 92924218 -10570756 + Lx5 LINE L1 6933 7050 0 5 1293 213 211 0 0 chr15 92924945 92924997 -10569977 + CT-rich Low_complexity Low_complexity 2 53 0 5 1293 24 32 0 0 chr15 92925696 92925727 -10569247 + AT_rich Low_complexity Low_complexity 1 31 0 5 1293 554 254 215 21 chr15 92926509 92926746 -10568228 - B4 SINE B4 -8 284 2 5 1293 1387 165 102 10 chr15 92928242 92928415 -10566559 + ORR1C2 LTR MaLR 1 190 -194 5 1293 486 0 0 0 chr15 92928415 92928469 -10566505 + (TC)n Simple_repeat Simple_repeat 2 55 0 5 1293 1387 165 102 10 chr15 92928469 92928589 -10566385 + ORR1C2 LTR MaLR 191 321 -63 5 1293 3933 173 63 25 chr15 92928589 92929691 -10565283 - Lx6 LINE L1 -1073 6387 5232 5 161 736 327 99 44 chr15 92929868 92930341 -10564633 + Lx9 LINE L1 7103 7601 -43 5 1294 221 261 14 28 chr15 92930952 92931023 -10563951 + GA-rich Low_complexity Low_complexity 3 72 0 5 1294 258 136 0 0 chr15 92931102 92931146 -10563828 + (TTA)n Simple_repeat Simple_repeat 3 46 0 5 1294 985 174 107 10 chr15 92932744 92932941 -10562033 + B3 SINE B2 1 216 0 5 1294 1129 267 59 33 chr15 92933438 92933775 -10561199 - ORR1D2 LTR MaLR 0 370 25 5 1294 513 0 0 0 chr15 92933827 92933884 -10561090 + (GGGA)n Simple_repeat Simple_repeat 3 59 0 5 1294 276 276 31 103 chr15 92934063 92934160 -10560814 + B1F1 SINE Alu 1 90 -59 5 1294 420 20 0 0 chr15 92934211 92934260 -10560714 + (TAA)n Simple_repeat Simple_repeat 3 51 0 5 1294 408 229 205 19 chr15 92934394 92934550 -10560424 - Lx7 LINE L1 -9 7464 7280 5 1294 1576 135 74 16 chr15 92934550 92934595 -10560379 - MT2B LTR ERVL 0 601 545 5 1294 203 61 30 0 chr15 92934595 92934628 -10560346 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 1294 1576 156 138 29 chr15 92934628 92935076 -10559898 - MT2B LTR ERVL -57 544 2 5 1294 381 254 79 0 chr15 92935077 92935191 -10559783 - Lx8 LINE L1 -190 7283 7161 5 1294 679 281 61 52 chr15 92935225 92935673 -10559301 - Lx7 LINE L1 -373 5930 5454 5 1294 207 0 0 0 chr15 92936133 92936156 -10558818 + (CAG)n Simple_repeat Simple_repeat 2 24 0 5 1294 3211 61 5 0 chr15 92937135 92937529 -10557445 - MTA_Mm LTR MaLR 0 396 1 5 1294 349 111 0 40 chr15 92937779 92937854 -10557120 + B1_Mur3 SINE Alu 78 147 0 5 1294 505 308 53 10 chr15 92937865 92938133 -10556841 + L1MA5A LINE L1 5703 6005 -295 5 1294 294 298 129 56 chr15 92938347 92938741 -10556233 + L1M5 LINE L1 3084 3506 -2640 5 1294 977 61 0 0 chr15 92938945 92939077 -10555897 + B1_Mm SINE Alu 16 147 0 5 1294 690 100 0 0 chr15 92939079 92939179 -10555795 + (GGAA)n Simple_repeat Simple_repeat 3 102 0 6 1294 897 300 169 25 chr15 92939223 92939324 -10555650 + L1MEc LINE L1 548 665 -5735 6 1294 1882 177 8 52 chr15 92939324 92939675 -10555299 - ORR1B2 LTR MaLR -1 366 21 6 1294 180 0 0 0 chr15 92939675 92939695 -10555279 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 1294 1882 177 8 52 chr15 92939695 92939725 -10555249 - ORR1B2 LTR MaLR -347 20 2 6 1294 897 300 169 25 chr15 92939725 92940272 -10554702 + L1MEc LINE L1 666 1299 -5101 6 1294 289 0 49 0 chr15 92940272 92940313 -10554661 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1294 897 300 169 25 chr15 92940313 92940477 -10554497 + L1MEc LINE L1 1300 1478 -4922 6 1294 342 0 0 0 chr15 92940501 92940539 -10554435 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1294 516 231 179 84 chr15 92940575 92940826 -10554148 - B4 SINE B4 -17 275 1 6 1294 226 143 12 49 chr15 92940849 92940930 -10554044 + (TG)n Simple_repeat Simple_repeat 1 78 0 6 1294 594 264 76 72 chr15 92940930 92941220 -10553754 - B4 SINE B4 0 292 2 6 1294 1706 21 0 15 chr15 92941226 92941422 -10553552 - B2_Mm1a SINE B2 0 193 1 6 1294 920 97 237 6 chr15 92942906 92943062 -10551912 + B2_Mm2 SINE B2 2 193 -2 6 1294 3685 147 29 26 chr15 92943067 92943680 -10551294 - Lx5 LINE L1 0 7050 6436 6 1294 252 0 0 0 chr15 92944192 92944220 -10550754 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 6 1294 456 309 64 64 chr15 92944268 92944503 -10550471 - MARNA DNA Mariner -17 569 335 6 1294 1701 182 36 111 chr15 92944826 92945460 -10549514 - RMER4A LTR ERVK 0 585 1 6 1294 376 284 66 41 chr15 92945652 92945773 -10549201 - RSINE1 SINE B4 -40 125 2 6 1294 272 83 21 0 chr15 92946682 92946730 -10548244 + (TTTTTG)n Simple_repeat Simple_repeat 5 53 0 6 1294 1442 52 178 14 chr15 92946909 92947123 -10547851 - Lx3_Mus LINE L1 0 7009 6761 6 1294 1240 183 4 4 chr15 92947164 92947389 -10547585 - URR1B DNA MER1_type 0 225 1 6 1294 198 0 0 0 chr15 92947490 92947512 -10547462 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1294 624 240 82 20 chr15 92947589 92947785 -10547189 + B3 SINE B2 3 210 -6 6 1294 234 0 0 0 chr15 92948199 92948225 -10546749 + (TA)n Simple_repeat Simple_repeat 1 26 0 6 1294 510 86 0 0 chr15 92948225 92948305 -10546669 + (CAGAGA)n Simple_repeat Simple_repeat 4 84 0 6 1294 315 224 145 0 chr15 92948308 92948384 -10546590 - PB1D10 SINE Alu -8 141 47 6 1294 227 213 0 13 chr15 92948446 92948522 -10546452 + (TG)n Simple_repeat Simple_repeat 2 76 0 6 1294 369 0 0 0 chr15 92948531 92948572 -10546402 + (TC)n Simple_repeat Simple_repeat 2 42 0 6 1294 519 31 0 0 chr15 92948572 92948636 -10546338 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 1294 236 258 14 57 chr15 92948907 92948977 -10545997 - L2a LINE L2 -5 3421 3355 6 1294 1517 175 50 0 chr15 92949033 92949313 -10545661 + MTC LTR MaLR 120 413 -8 6 1294 1133 212 223 14 chr15 92949347 92949692 -10545282 + MTD LTR MaLR 1 417 -2 6 1294 22 0 0 0 chr15 92950148 92950170 -10544804 + GC_rich Low_complexity Low_complexity 1 22 0 6 1294 511 267 85 20 chr15 92950669 92950822 -10544152 - B3A SINE B2 -9 189 27 6 1294 250 317 78 10 chr15 92951433 92951535 -10543439 + MLT1J LTR MaLR 389 497 -15 6 1294 2277 82 69 0 chr15 92951537 92951843 -10543131 - ORR1A2 LTR MaLR 0 327 1 6 1294 405 224 147 125 chr15 92953756 92953806 -10541168 - B3A SINE B2 -6 192 154 6 1294 288 0 0 0 chr15 92953806 92953838 -10541136 + (CATG)n Simple_repeat Simple_repeat 3 34 0 6 1294 405 224 147 125 chr15 92953838 92953971 -10541003 - B3A SINE B2 -45 153 5 6 1294 210 167 0 0 chr15 92954118 92954154 -10540820 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 6 1294 342 45 0 0 chr15 92954425 92954469 -10540505 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1294 622 276 45 22 chr15 92954473 92954651 -10540323 + MLT1A LTR MaLR 189 370 -4 6 1294 255 61 0 0 chr15 92956758 92956791 -10538183 + (TTG)n Simple_repeat Simple_repeat 2 34 0 6 1294 411 21 0 0 chr15 92956933 92956981 -10537993 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1294 978 227 6 21 chr15 92957073 92957287 -10537687 + B3 SINE B2 6 210 -6 6 1294 1210 135 79 33 chr15 92958767 92958982 -10535992 + URR1B DNA MER1_type 1 225 0 6 1294 2074 236 65 10 chr15 92959101 92959561 -10535413 + MT2A LTR ERVL 1 488 -45 6 1294 342 0 0 0 chr15 92959561 92959599 -10535375 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1294 2074 236 65 10 chr15 92959599 92959643 -10535331 + MT2A LTR ERVL 489 532 -1 6 1294 197 188 19 77 chr15 92960109 92960161 -10534813 - L3b LINE CR1 -101 381 333 6 1294 554 75 12 0 chr15 92960433 92960513 -10534461 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 6 1294 877 261 54 0 chr15 92960513 92960697 -10534277 - B3 SINE B2 -8 208 15 6 1294 955 160 23 3 chr15 92961790 92962140 -10532834 + GA-rich Low_complexity Low_complexity 1 356 0 6 1294 468 0 0 0 chr15 92962308 92962360 -10532614 + (TC)n Simple_repeat Simple_repeat 1 52 0 6 1294 187 353 29 0 chr15 92962416 92962484 -10532490 + L2c LINE L2 3257 3326 -61 6 1294 682 258 33 9 chr15 92962809 92963020 -10531954 - B3 SINE B2 0 216 1 6 1294 2936 212 47 97 chr15 92964681 92965520 -10529454 - Lx7 LINE L1 0 7696 6900 6 1294 928 141 155 5 chr15 92965519 92965712 -10529262 + Lx4B LINE L1 6819 7040 -18 6 1294 339 25 0 0 chr15 92965712 92965752 -10529222 + (CATA)n Simple_repeat Simple_repeat 2 41 0 6 1294 1128 267 118 24 chr15 92965761 92966144 -10528830 - MTD LTR MaLR 0 419 1 6 1294 444 304 87 43 chr15 92966305 92966559 -10528415 - L1ME3 LINE L1 -2 6160 5896 6 1294 675 245 109 0 chr15 92966577 92966761 -10528213 - B3 SINE B2 -12 204 1 6 1294 297 0 0 0 chr15 92966862 92966895 -10528079 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1294 608 283 164 41 chr15 92967512 92967829 -10527145 - MLT1F2 LTR MaLR 0 560 205 6 1294 2374 66 122 11 chr15 92968002 92968353 -10526621 + RLTR10 LTR ERVK 1 390 0 6 1294 285 29 0 0 chr15 92968962 92968996 -10525978 + (GTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1294 483 231 0 0 chr15 92969925 92970059 -10524915 + (TA)n Simple_repeat Simple_repeat 2 135 0 6 1294 28 71 0 0 chr15 92970146 92970202 -10524772 + AT_rich Low_complexity Low_complexity 1 56 0 6 1294 3260 58 10 0 chr15 92970490 92970886 -10524088 - MTB LTR MaLR 0 400 1 6 1294 239 328 84 54 chr15 92970997 92971258 -10523716 - Tigger7 DNA MER2_type -11 2480 2212 6 1294 287 337 11 0 chr15 92971233 92971322 -10523652 - Tigger7 DNA MER2_type -2081 410 321 6 1294 344 307 76 38 chr15 92971346 92971478 -10523496 - Tigger7 DNA MER2_type -2283 208 72 6 1294 1086 82 14 0 chr15 92972016 92972162 -10522812 + B1_Mus1 SINE Alu 1 148 0 6 1294 605 139 58 5 chr15 92972162 92972599 -10522375 + GA-rich Low_complexity Low_complexity 1 460 0 6 1294 1504 269 34 120 chr15 92973061 92973128 -10521846 - MLT2B3 LTR ERVL -6 509 455 6 1294 3339 114 20 42 chr15 92973128 92973676 -10521298 - Lx3C LINE L1 0 6976 6441 6 1294 1575 269 34 120 chr15 92973676 92974165 -10520809 - MLT2B3 LTR ERVL -50 504 1 6 1294 643 257 68 14 chr15 92974260 92974481 -10520493 + L1M3 LINE L1 5563 5795 -385 6 1294 394 274 128 99 chr15 92974538 92974850 -10520124 - MLT2B4 LTR ERVL -53 503 183 6 1294 894 160 28 0 chr15 92974988 92975132 -10519842 - B1_Mur4 SINE Alu -2 148 1 6 1294 230 332 83 26 chr15 92976154 92976383 -10518591 + L1ME2 LINE L1 5272 5513 -931 6 1294 341 323 107 34 chr15 92976406 92976640 -10518334 + L1ME2 LINE L1 5624 5874 -290 6 1294 504 0 0 0 chr15 92976645 92976701 -10518273 + (TAA)n Simple_repeat Simple_repeat 2 57 0 6 1294 396 301 10 0 chr15 92976961 92977064 -10517910 - PB1D10 SINE Alu -9 108 5 6 1294 587 108 0 11 chr15 92977491 92977585 -10517389 + (TA)n Simple_repeat Simple_repeat 1 93 0 6 1294 349 161 23 0 chr15 92978594 92978681 -10516293 + (TA)n Simple_repeat Simple_repeat 1 89 0 6 1294 275 206 63 0 chr15 92979466 92979529 -10515445 - MER45A DNA Tip100 -32 146 80 6 1294 708 114 0 0 chr15 92979704 92979835 -10515139 + (TAGA)n Simple_repeat Simple_repeat 2 132 0 6 1294 387 0 0 0 chr15 92979835 92979877 -10515097 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 6 1294 1454 55 11 11 chr15 92979884 92980069 -10514905 + B2_Mm2 SINE B2 1 185 -10 6 1294 603 0 0 0 chr15 92980069 92980136 -10514838 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 6 1294 758 11 0 11 chr15 92980606 92980698 -10514276 + (TG)n Simple_repeat Simple_repeat 1 91 0 6 1294 439 295 58 159 chr15 92980754 92981012 -10513962 + L1MC4 LINE L1 6797 7028 -1014 6 1294 1006 244 90 38 chr15 92981100 92981390 -10513584 - ORR1D2 LTR MaLR 0 370 66 6 1294 1700 144 97 89 chr15 92981391 92981741 -10513233 - ORR1B1 LTR MaLR -1 393 41 6 1294 233 160 120 0 chr15 92981919 92981969 -10513005 + L1MC4 LINE L1 7488 7543 -499 6 1294 2619 143 24 12 chr15 92982056 92982472 -10512502 - MTC LTR MaLR 0 421 1 6 1294 207 267 138 51 chr15 92983056 92983194 -10511780 + MIRb SINE MIR 73 222 -46 6 1294 362 297 122 7 chr15 92983197 92983336 -10511638 + RSINE1 SINE B4 3 157 -8 6 1294 1196 48 0 7 chr15 92983384 92983531 -10511443 - B1_Mm SINE Alu 0 147 2 6 1294 1938 157 103 3 chr15 92983543 92983894 -10511080 - ORR1B1 LTR MaLR -8 386 1 6 1294 527 0 16 0 chr15 92984705 92984768 -10510206 + (TAAAA)n Simple_repeat Simple_repeat 2 65 0 6 1294 791 200 112 31 chr15 92985012 92985208 -10509766 + B3 SINE B2 5 216 0 6 1294 180 324 27 0 chr15 92985386 92985460 -10509514 + L2 LINE L2 2457 2532 -887 6 1294 207 331 0 0 chr15 92985543 92985721 -10509253 + (CA)n Simple_repeat Simple_repeat 1 178 0 6 1294 399 248 0 0 chr15 92985753 92985906 -10509068 + (CA)n Simple_repeat Simple_repeat 1 153 0 6 1294 381 269 0 0 chr15 92985919 92986090 -10508884 + (CA)n Simple_repeat Simple_repeat 1 171 0 6 1294 283 353 34 45 chr15 92986992 92987170 -10507804 - MIRb SINE MIR -76 192 17 6 1294 920 120 8 0 chr15 92988034 92988167 -10506807 + B1_Mus1 SINE Alu 2 135 -13 6 1294 204 40 0 0 chr15 92988198 92988223 -10506751 + (TA)n Simple_repeat Simple_repeat 2 26 0 6 1294 188 309 151 0 chr15 92988245 92988384 -10506590 + L2 LINE L2 1107 1266 -2153 6 1294 603 330 34 22 chr15 92988744 92989011 -10505963 - L3 LINE CR1 -642 3847 3578 7 1294 229 385 36 15 chr15 92989170 92989307 -10505667 - MER5A DNA MER1_type -2 187 48 7 1294 2173 80 60 0 chr15 92989774 92990075 -10504899 + ORR1A2 LTR MaLR 1 319 -8 7 1294 618 179 0 0 chr15 92990079 92990213 -10504761 + (TG)n Simple_repeat Simple_repeat 2 135 0 7 1294 621 263 76 15 chr15 92990305 92990502 -10504472 - ID_B1 SINE B4 -2 222 14 7 1294 204 185 0 0 chr15 92990583 92990637 -10504337 + G-rich Low_complexity Low_complexity 1 54 0 7 1294 21 71 0 0 chr15 92990721 92990763 -10504211 + AT_rich Low_complexity Low_complexity 1 42 0 7 1294 2211 111 9 0 chr15 92990936 92991252 -10503722 - ORR1A2 LTR MaLR -8 319 1 7 1294 191 359 176 41 chr15 92991384 92991605 -10503369 - L4 LINE RTE -916 1113 863 7 1294 2019 139 56 20 chr15 92993120 92993320 -10501654 + RMER17C LTR ERVK 1 206 -204 7 1294 744 30 37 29 chr15 92993320 92993456 -10501518 + (TTCTC)n Simple_repeat Simple_repeat 4 140 0 7 1294 2019 139 56 20 chr15 92993456 92993651 -10501323 + RMER17C LTR ERVK 207 410 0 7 1294 187 193 182 57 chr15 92994137 92994225 -10500749 + L3 LINE CR1 2029 2127 -2362 7 1294 3739 36 5 0 chr15 92994515 92994955 -10500019 - L1_Mus1 LINE L1 0 6567 6126 7 1294 388 232 24 0 chr15 92994955 92995037 -10499937 + B3 SINE B2 39 122 -94 7 1294 471 264 124 35 chr15 92995028 92995173 -10499801 - MER58B DNA MER1_type -8 333 176 7 1294 212 0 36 0 chr15 92995175 92995203 -10499771 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 1294 1195 62 0 0 chr15 92995524 92995670 -10499304 + B1_Mus2 SINE Alu 2 147 0 7 1294 188 34 0 33 chr15 92995675 92995705 -10499269 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 1294 859 236 44 5 chr15 92996450 92996654 -10498320 + B3 SINE B2 1 212 -4 7 1294 280 181 37 13 chr15 92996674 92996745 -10498229 + MER77 LTR ERVL 260 354 -253 7 1294 270 305 114 0 chr15 92997501 92997606 -10497368 + RMER30 DNA MER1_type 26 142 -60 7 1294 695 300 59 0 chr15 92998643 92998863 -10496111 - MER58B DNA MER1_type -105 236 4 7 1294 1032 246 104 68 chr15 92998866 92999040 -10495934 + MTEb LTR MaLR 1 179 -200 7 1294 1621 212 44 68 chr15 92999040 92999469 -10495505 + MTD LTR MaLR 1 419 0 7 1294 1032 246 104 68 chr15 92999469 92999660 -10495314 + MTEb LTR MaLR 180 378 -1 7 1294 36025 35 0 0 chr15 93000168 93005635 -10489339 + L1Md_T LINE L1 26 5589 -297 1 1294 9159 6 0 0 chr15 93005635 93006631 -10488343 + L1Md_T LINE L1 5590 6585 0 1 1294 1804 187 66 30 chr15 93009059 93009500 -10485474 + L1_Rod LINE L1 1466 1922 -3925 2 1294 457 178 20 10 chr15 93009502 93009604 -10485370 + ORR1D2 LTR MaLR 206 308 -62 3 1294 582 138 0 0 chr15 93009913 93010022 -10484952 + (TTG)n Simple_repeat Simple_repeat 2 110 0 4 1294 1916 273 87 20 chr15 93011666 93012357 -10482617 + Lx8 LINE L1 6297 7033 -440 5 1294 225 94 0 0 chr15 93012357 93012389 -10482585 + (GGA)n Simple_repeat Simple_repeat 2 33 0 6 1294 781 166 12 6 chr15 93012393 93012557 -10482417 + GA-rich Low_complexity Low_complexity 3 167 0 7 1294 604 241 7 43 chr15 93012557 93012696 -10482278 + B1_Mur1 SINE Alu 1 134 -15 8 1294 608 0 14 0 chr15 93012697 93012769 -10482205 + (GGAA)n Simple_repeat Simple_repeat 1 73 0 9 1294 987 289 68 70 chr15 93012778 93013221 -10481753 + Lx8 LINE L1 7016 7457 -16 5 1294 2917 22 0 145 chr15 93013778 93014205 -10480769 + RLTR10B2 LTR ERVK 1 365 0 1 1294 195 371 0 0 chr15 93014382 93014452 -10480522 - MIR SINE MIR -81 127 58 1 1294 2589 104 52 0 chr15 93014459 93014845 -10480129 + Lx2 LINE L1 6592 6997 0 1 1294 23 68 0 0 chr15 93014845 93014889 -10480085 + AT_rich Low_complexity Low_complexity 1 44 0 1 1294 7078 27 19 2 chr15 93016386 93017205 -10477769 + L1Md_F2 LINE L1 5749 6581 -1 1 1294 2744 154 48 39 chr15 93017510 93018029 -10476945 - RLTR28 LTR ERVL 0 524 1 1 1294 287 346 124 13 chr15 93018076 93018310 -10476664 - MER44A DNA MER2_type -56 283 24 1 1294 315 0 0 0 chr15 93018486 93018521 -10476453 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1294 759 94 24 0 chr15 93018838 93018965 -10476009 + (TCTCC)n Simple_repeat Simple_repeat 3 132 0 1 1294 280 274 14 0 chr15 93019513 93019586 -10475388 + ID_B1 SINE B4 98 171 -53 1 1294 277 333 11 0 chr15 93019586 93019606 -10475368 + PB1D10 SINE Alu 17 110 -7 2 1294 21 0 0 0 chr15 93020370 93020391 -10474583 + AT_rich Low_complexity Low_complexity 1 21 0 2 1294 22 0 0 0 chr15 93021814 93021836 -10473138 + AT_rich Low_complexity Low_complexity 1 22 0 2 1294 339 65 0 0 chr15 93023178 93023224 -10471750 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 2 1294 372 317 33 16 chr15 93023459 93023581 -10471393 - MER5A DNA MER1_type -36 153 30 2 1294 1359 168 152 19 chr15 93023721 93024033 -10470941 - ORR1C2 LTR MaLR 0 374 21 2 1294 959 186 4 112 chr15 93024033 93024293 -10470681 - ORR1C2-int LTR MaLR 0 1370 1139 2 1294 1790 173 71 16 chr15 93024584 93024691 -10470283 - ORR1C2 LTR MaLR 0 384 281 2 1294 1911 222 59 135 chr15 93024691 93025351 -10469623 - RMER19C LTR ERVK 0 611 2 2 1294 1790 173 71 16 chr15 93025351 93025607 -10469367 - ORR1C2 LTR MaLR -104 280 1 2 1294 186 103 0 0 chr15 93026295 93026324 -10468650 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1294 304 170 0 0 chr15 93026348 93026401 -10468573 + L1_Rod LINE L1 2247 2299 -3548 2 1294 1381 105 21 0 chr15 93026402 93026593 -10468381 + B2_Mm2 SINE B2 1 195 0 2 1294 727 241 124 39 chr15 93026596 93026951 -10468023 + L1_Rod LINE L1 2898 3282 -2565 2 1294 1084 221 62 22 chr15 93028226 93028549 -10466425 + L1_Rod LINE L1 3253 3588 -2259 2 1294 3852 209 58 53 chr15 93028538 93028758 -10466216 + L1_Rod LINE L1 4700 4916 -931 2 1294 225 0 0 0 chr15 93028758 93028783 -10466191 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 3 1294 3852 209 58 53 chr15 93028783 93029589 -10465385 + L1_Rod LINE L1 4917 5731 -116 2 1294 208 293 121 0 chr15 93029874 93029973 -10465001 - L2a LINE L2 -32 3394 3284 3 1294 189 333 36 36 chr15 93030106 93030190 -10464784 + MER5B DNA MER1_type 93 176 -2 3 1294 184 364 11 0 chr15 93030425 93030513 -10464461 - MIRc SINE MIR -114 154 66 3 1294 695 275 106 11 chr15 93030568 93030851 -10464123 - Charlie13b DNA Charlie -165 347 38 3 1294 1018 276 46 56 chr15 93031030 93031421 -10463553 + MLT1B LTR MaLR 1 387 -3 3 1294 1771 263 47 20 chr15 93031457 93032004 -10462970 + Lx6 LINE L1 6495 7434 -26 3 1294 1075 114 42 37 chr15 93032091 93032282 -10462692 + B2_Mm2 SINE B2 2 193 -2 3 1294 246 154 77 0 chr15 93032783 93032882 -10462092 + (TA)n Simple_repeat Simple_repeat 1 106 0 3 1294 922 191 23 0 chr15 93033431 93033604 -10461370 + B3A SINE B2 5 181 -17 3 1294 405 0 0 0 chr15 93033604 93033649 -10461325 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 1294 263 140 20 0 chr15 93033774 93033824 -10461150 + GA-rich Low_complexity Low_complexity 1 51 0 4 1294 366 188 0 0 chr15 93033912 93034013 -10460961 + (CAGAGA)n Simple_repeat Simple_repeat 2 102 0 4 1294 458 312 86 43 chr15 93034535 93034707 -10460267 - ORR1E LTR MaLR -20 339 161 4 1294 872 67 0 8 chr15 93034707 93034828 -10460146 + (GGAA)n Simple_repeat Simple_repeat 4 123 0 4 1294 458 312 86 43 chr15 93034828 93034980 -10459994 - ORR1E LTR MaLR -199 160 3 4 1294 24 0 0 0 chr15 93035272 93035296 -10459678 + AT_rich Low_complexity Low_complexity 1 24 0 4 1294 907 240 5 11 chr15 93035344 93035529 -10459445 + B3 SINE B2 4 187 -29 4 1294 251 259 107 82 chr15 93036721 93036843 -10458131 + MIRb SINE MIR 64 188 -80 4 1294 24 32 0 0 chr15 93036924 93036955 -10458019 + AT_rich Low_complexity Low_complexity 1 31 0 4 1294 245 287 170 32 chr15 93037823 93038001 -10456973 - MLT1H1 LTR MaLR -300 295 54 4 1294 1145 141 93 42 chr15 93038441 93038656 -10456318 - URR1A DNA MER1_type 0 226 1 5 1294 591 194 132 8 chr15 93038831 93038994 -10455980 - MTD LTR MaLR -14 405 236 5 1294 457 113 0 0 chr15 93039001 93039072 -10455902 + B1_Mus2 SINE Alu 77 147 0 5 1294 607 211 63 7 chr15 93039101 93039244 -10455730 - MTD LTR MaLR -230 189 39 5 1294 192 111 0 0 chr15 93039703 93039739 -10455235 + (A)n Simple_repeat Simple_repeat 1 36 0 5 1294 23 0 0 0 chr15 93042644 93042667 -10452307 + AT_rich Low_complexity Low_complexity 1 23 0 5 1294 207 0 0 0 chr15 93042819 93042842 -10452132 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1294 223 252 158 26 chr15 93043450 93043564 -10451410 + MIRb SINE MIR 70 198 -70 5 1294 267 68 104 52 chr15 93043704 93043781 -10451193 + (CCCCAG)n Simple_repeat Simple_repeat 6 86 0 5 1294 575 127 54 6 chr15 93045283 93045409 -10449565 + CT-rich Low_complexity Low_complexity 46 175 0 5 1294 207 0 0 0 chr15 93045409 93045432 -10449542 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 1294 749 84 0 72 chr15 93045432 93045629 -10449345 + CT-rich Low_complexity Low_complexity 1 182 0 6 1294 200 14 0 127 chr15 93045629 93045708 -10449266 + (TCTCC)n Simple_repeat Simple_repeat 2 70 0 6 1294 1208 213 24 68 chr15 93047035 93047373 -10447601 - Lx7 LINE L1 -204 7492 7170 6 1294 1477 158 65 7 chr15 93047376 93047410 -10447564 + Lx5 LINE L1 6741 6778 -272 6 1294 243 0 0 0 chr15 93047410 93047437 -10447537 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1294 1477 158 65 7 chr15 93047437 93047695 -10447279 + Lx5 LINE L1 6779 7049 -1 6 1294 318 26 0 0 chr15 93047698 93047737 -10447237 + (CATA)n Simple_repeat Simple_repeat 2 40 0 6 1294 1621 187 6 39 chr15 93048290 93048647 -10446327 - ORR1D1 LTR MaLR -29 345 1 6 1294 247 222 0 36 chr15 93049048 93049104 -10445870 - Lx8 LINE L1 -254 7219 7166 6 1294 969 288 46 11 chr15 93049208 93049492 -10445482 - Lx8 LINE L1 -716 6757 6464 6 1294 706 237 57 0 chr15 93049871 93050048 -10444926 + B3 SINE B2 5 191 -25 6 1294 1051 91 7 0 chr15 93050075 93050218 -10444756 + B1_Mus2 SINE Alu 4 147 0 6 1294 230 192 39 0 chr15 93050506 93050558 -10444416 + GA-rich Low_complexity Low_complexity 2 55 0 7 1294 432 0 0 0 chr15 93050560 93050608 -10444366 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 1294 302 256 171 37 chr15 93050722 93050909 -10444065 + MLT1A LTR MaLR 88 299 -75 7 1294 213 196 0 0 chr15 93051066 93051112 -10443862 + (TGAA)n Simple_repeat Simple_repeat 2 47 0 7 1294 396 111 12 24 chr15 93052354 93052437 -10442537 + (TA)n Simple_repeat Simple_repeat 1 82 0 7 1294 387 149 0 0 chr15 93052515 93052589 -10442385 + (TG)n Simple_repeat Simple_repeat 2 75 0 7 1294 486 175 0 0 chr15 93054745 93054930 -10440044 + (TG)n Simple_repeat Simple_repeat 1 185 0 7 1294 791 215 25 19 chr15 93054933 93055094 -10439880 - RSINE1 SINE B4 -1 164 3 7 1294 239 291 22 34 chr15 93055418 93055507 -10439467 + MIRm SINE MIR 48 135 -141 7 1294 309 51 0 0 chr15 93055611 93055650 -10439324 + (CCTA)n Simple_repeat Simple_repeat 1 39 0 7 1294 214 200 18 0 chr15 93055650 93055705 -10439269 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 8 1294 231 156 0 0 chr15 93055822 93055867 -10439107 + Lx8 LINE L1 7428 7472 -1 8 1294 2187 75 51 16 chr15 93056253 93056566 -10438408 - ORR1A2 LTR MaLR -1 326 3 8 1294 309 26 0 0 chr15 93056630 93056668 -10438306 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 1294 1546 57 5 0 chr15 93056810 93057003 -10437971 + B2_Mm2 SINE B2 2 195 0 8 1294 180 216 0 51 chr15 93057098 93057137 -10437837 + L2a LINE L2 3146 3182 -244 8 1294 250 263 51 36 chr15 93057437 93057575 -10437399 + (CCTG)n Simple_repeat Simple_repeat 2 141 0 8 1294 230 284 0 47 chr15 93057706 93057791 -10437183 - MLT1A1 LTR MaLR -1 407 327 8 1294 951 145 0 40 chr15 93058604 93058755 -10436219 + B1_Mus1 SINE Alu 2 146 -2 8 1294 1200 132 10 10 chr15 93060260 93060452 -10434522 + B2_Mm1t SINE B2 1 192 -1 8 1294 338 61 20 0 chr15 93060452 93060501 -10434473 + (GAAA)n Simple_repeat Simple_repeat 1 50 0 9 1294 935 150 5 0 chr15 93060501 93060716 -10434258 + G-rich Low_complexity Low_complexity 1 216 0 9 1294 464 48 16 0 chr15 93060716 93060779 -10434195 + (GA)n Simple_repeat Simple_repeat 1 64 0 9 161 258 311 89 0 chr15 93061102 93061192 -10433782 - PB1D10 SINE Alu -7 110 13 9 1295 459 135 27 0 chr15 93061424 93061498 -10433476 + B3A SINE B2 2 77 -121 9 1295 231 230 122 81 chr15 93061600 93061723 -10433251 + LTR33 LTR ERVL 1 128 -387 9 1295 477 0 0 0 chr15 93062742 93062795 -10432179 + (TAA)n Simple_repeat Simple_repeat 2 54 0 9 1295 1567 256 25 72 chr15 93062900 93063389 -10431585 + Lx8 LINE L1 6299 6764 -709 9 1295 787 158 21 7 chr15 93063395 93063535 -10431439 + ORR1D1 LTR MaLR 1 142 -232 9 1295 7493 121 17 53 chr15 93063541 93064793 -10430181 - Lx2 LINE L1 0 6997 5792 9 1295 1964 4 0 8 chr15 93064793 93065034 -10429940 + 7SK RNA RNA 1 239 -92 1 1295 6070 131 7 0 chr15 93065034 93065940 -10429034 - L1_Mm LINE L1 -78 5805 4894 1 1295 1114 178 37 5 chr15 93065944 93066159 -10428815 + ORR1D1 LTR MaLR 145 366 -8 9 1295 1126 269 87 6 chr15 93066174 93066531 -10428443 + Lx8 LINE L1 6774 7188 -285 9 1295 312 205 99 37 chr15 93066822 93066903 -10428071 + B3A SINE B2 1 86 -112 1 1295 233 118 18 73 chr15 93066926 93066981 -10427993 - B2_Mm1t SINE B2 -2 191 140 1 1295 3097 82 71 7 chr15 93066981 93067147 -10427827 + RLTR44C LTR ERVK 1 167 -335 1 1295 405 0 0 0 chr15 93067147 93067192 -10427782 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1295 3097 82 71 7 chr15 93067192 93067490 -10427484 + RLTR44C LTR ERVK 168 494 -8 1 1295 985 110 21 0 chr15 93067488 93067633 -10427341 - B2_Mm1t SINE B2 -45 148 1 1 1295 1849 225 221 41 chr15 93067757 93068329 -10426645 - Lx9 LINE L1 -1671 5973 5285 1 1295 1229 62 0 0 chr15 93068329 93068475 -10426499 - B1_Mus2 SINE Alu 0 147 2 1 1295 1849 218 209 46 chr15 93068475 93068671 -10426303 - Lx9 LINE L1 -563 5284 5043 1 1295 397 296 31 0 chr15 93068678 93068776 -10426198 + RSINE1 SINE B4 3 103 -62 1 1295 750 225 93 17 chr15 93068871 93069043 -10425931 - B3 SINE B2 -4 212 28 1 1295 23 33 0 0 chr15 93069482 93069512 -10425462 + AT_rich Low_complexity Low_complexity 1 30 0 1 1295 392 312 131 59 chr15 93069770 93069844 -10425130 - B4A SINE B4 -1 291 226 1 1295 683 204 53 8 chr15 93069844 93069977 -10424997 - B1_Mur1 SINE Alu -8 141 3 1 1295 392 312 131 59 chr15 93069977 93070123 -10424851 - B4A SINE B4 -67 225 55 1 1295 293 228 155 19 chr15 93071272 93071375 -10423599 - PB1D10 SINE Alu 0 117 1 1 1295 671 210 14 34 chr15 93071815 93071963 -10423011 - B3 SINE B2 -4 212 68 1 1295 257 294 16 40 chr15 93072547 93072671 -10422303 + CT-rich Low_complexity Low_complexity 6 126 0 1 1295 236 159 265 102 chr15 93074354 93074452 -10420522 + Tigger1 DNA MER2_type 701 814 -1604 1 1295 675 81 0 0 chr15 93074690 93074789 -10420185 + (CA)n Simple_repeat Simple_repeat 2 100 0 1 1295 186 246 25 76 chr15 93075535 93075614 -10419360 + L3 LINE CR1 1919 1993 -2496 1 1295 490 110 360 18 chr15 93075823 93075920 -10419054 + B1_Mur4 SINE Alu 2 137 -13 1 1295 180 0 0 0 chr15 93075920 93075940 -10419034 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1 1295 490 110 360 18 chr15 93075940 93075953 -10419021 + B1_Mur4 SINE Alu 138 150 0 1 1295 252 233 17 0 chr15 93076787 93076847 -10418127 + Lx8 LINE L1 6463 6523 -950 1 1295 259 229 14 14 chr15 93076864 93076935 -10418039 + Lx8 LINE L1 6878 6948 -525 1 1295 1596 27 32 0 chr15 93076951 93077138 -10417836 + B2_Mm1a SINE B2 1 193 0 1 1295 411 330 56 6 chr15 93077175 93077355 -10417619 + Lx8 LINE L1 7036 7224 -249 1 1295 180 257 0 0 chr15 93077408 93077478 -10417496 + GA-rich Low_complexity Low_complexity 2 71 0 1 1295 268 316 25 0 chr15 93078633 93078712 -10416262 - ID2 SINE ID -1 82 2 1 1295 293 327 54 9 chr15 93079185 93079296 -10415678 - PB1D10 SINE Alu -1 116 1 1 1295 335 196 43 75 chr15 93079575 93079669 -10415305 - PB1D7 SINE Alu 0 120 30 1 1295 23 33 0 0 chr15 93079708 93079738 -10415236 + AT_rich Low_complexity Low_complexity 1 30 0 1 1295 188 200 0 0 chr15 93079784 93079814 -10415160 - MIR SINE MIR -28 234 205 1 1295 231 350 6 92 chr15 93079977 93080150 -10414824 + B4A SINE B4 42 199 -93 1 1295 342 261 45 136 chr15 93080450 93080627 -10414347 + RMER15 LTR ERVL 347 507 -68 1 1295 256 223 85 113 chr15 93080853 93080959 -10414015 + PB1D10 SINE Alu 15 117 0 1 1295 1150 127 35 0 chr15 93080959 93081132 -10413842 + B2_Mm1t SINE B2 1 179 -14 1 1295 346 73 323 121 chr15 93081179 93081303 -10413671 + B2_Mm2 SINE B2 47 195 0 1 1295 239 351 97 56 chr15 93081395 93081591 -10413383 + B4A SINE B4 87 290 -2 1 1295 626 233 52 84 chr15 93082539 93083005 -10411969 + MT2A LTR ERVL 1 558 -43 1 1295 224 208 186 10 chr15 93083083 93083180 -10411794 + B1_Mus2 SINE Alu 6 119 -1 1 1295 385 208 101 152 chr15 93083537 93083735 -10411239 - B3A SINE B2 -13 203 16 1 1295 231 36 0 0 chr15 93084101 93084129 -10410845 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 1295 438 191 147 11 chr15 93084150 93084245 -10410729 - PB1D9 SINE Alu -11 109 2 1 1295 809 238 32 16 chr15 93084273 93084461 -10410513 - B3 SINE B2 -25 191 1 1 1295 395 228 172 62 chr15 93084502 93084647 -10410327 - B3A SINE B2 -36 162 2 1 1295 522 264 55 36 chr15 93085648 93085813 -10409161 + RMER30 DNA MER1_type 7 174 -28 1 1295 2225 179 134 17 chr15 93086151 93086628 -10408346 + MT2A LTR ERVL 1 533 0 1 1295 273 260 27 14 chr15 93086637 93086711 -10408263 - B1F1 SINE Alu -52 97 23 1 1295 212 284 11 100 chr15 93086827 93086841 -10408133 + ID SINE ID 70 75 -149 1 1295 265 290 70 61 chr15 93086841 93086955 -10408019 + PB1D10 SINE Alu 1 115 -2 1 1295 193 312 0 135 chr15 93087452 93087578 -10407396 + L2b LINE L2 3246 3354 -21 1 1295 500 273 29 7 chr15 93087599 93087739 -10407235 + B1_Mur1 SINE Alu 1 143 -6 1 1295 375 174 72 52 chr15 93087893 93087990 -10406984 + PB1D7 SINE Alu 22 120 0 1 1295 725 219 35 23 chr15 93088003 93088176 -10406798 + B3A SINE B2 2 176 -22 1 1295 656 143 65 43 chr15 93088379 93088518 -10406456 - B1_Mur3 SINE Alu -1 148 7 1 1295 1638 193 102 6 chr15 93089078 93089422 -10405552 + ORR1C1 LTR MaLR 1 377 -1 1 1295 221 152 0 0 chr15 93089904 93089937 -10405037 + B4A SINE B4 43 75 -217 1 1295 292 200 67 0 chr15 93090577 93090682 -10404292 + (CAA)n Simple_repeat Simple_repeat 1 112 0 1 1295 1323 75 32 16 chr15 93090821 93091010 -10403964 + B2_Mm2 SINE B2 2 193 -2 1 1295 270 151 276 51 chr15 93091189 93091287 -10403687 + PB1D7 SINE Alu 1 120 0 1 1295 338 343 38 9 chr15 93091786 93091892 -10403082 + MLT1J LTR MaLR 200 308 -204 1 1295 780 177 7 7 chr15 93093467 93093609 -10401365 + B3 SINE B2 75 216 0 1 1295 287 240 148 10 chr15 93093636 93093737 -10401237 + PB1D10 SINE Alu 3 117 0 1 1295 384 315 8 61 chr15 93093973 93094105 -10400869 + ID_B1 SINE B4 99 223 -1 1 1295 22 0 0 0 chr15 93095411 93095433 -10399541 + AT_rich Low_complexity Low_complexity 1 22 0 1 1295 647 238 187 43 chr15 93095708 93096013 -10398961 + MTC LTR MaLR 17 395 -26 1 1295 1347 91 16 0 chr15 93098963 93099150 -10395824 + B2_Mm1a SINE B2 1 190 -3 1 1295 454 305 26 0 chr15 93099251 93099405 -10395569 + RSINE1 SINE B4 2 159 -6 1 1295 268 319 11 0 chr15 93099518 93099609 -10395365 + ID_B1 SINE B4 131 222 -2 1 1295 399 294 138 22 chr15 93099609 93099939 -10395035 + L1MB7 LINE L1 5677 6042 -142 1 1295 898 193 149 4 chr15 93100068 93100323 -10394651 + B4A SINE B4 1 292 0 1 1295 190 247 12 24 chr15 93100324 93100407 -10394567 + (CATATA)n Simple_repeat Simple_repeat 4 85 0 1 1295 608 235 8 0 chr15 93100502 93100621 -10394353 + B3A SINE B2 1 120 -78 1 1295 276 152 0 0 chr15 93100664 93100710 -10394264 + RMER19B LTR ERVK 3 48 -854 1 1295 251 125 20 20 chr15 93100716 93100765 -10394209 + PB1D9 SINE Alu 41 89 -31 1 1295 285 241 96 0 chr15 93100779 93100862 -10394112 + PB1 SINE Alu 19 109 -18 1 1295 216 0 0 0 chr15 93101348 93101372 -10393602 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 1 1295 1138 142 11 0 chr15 93102075 93102251 -10392723 + B2_Mm1t SINE B2 2 179 -14 1 1295 284 194 12 33 chr15 93102298 93102371 -10392603 + B2_Mm2 SINE B2 47 121 -95 1 1295 26 30 0 0 chr15 93102371 93102404 -10392570 + AT_rich Low_complexity Low_complexity 1 33 0 1 1295 1207 68 0 0 chr15 93102463 93102611 -10392363 + B1_Mus1 SINE Alu 1 148 0 1 1295 294 264 182 51 chr15 93102739 93102915 -10392059 + MLT1A0 LTR MaLR 6 204 -161 1 1295 213 208 36 36 chr15 93103450 93103505 -10391469 - MIRb SINE MIR -35 233 179 1 1295 594 252 28 0 chr15 93103916 93104059 -10390915 - B1F SINE Alu -2 147 1 1 1295 261 0 0 0 chr15 93104200 93104229 -10390745 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1295 840 174 14 0 chr15 93104229 93104367 -10390607 - B1_Mur4 SINE Alu -10 140 1 1 1295 436 169 0 0 chr15 93104370 93104441 -10390533 - 4.5SRNA scRNA scRNA -3 91 21 1 1295 339 130 0 0 chr15 93105521 93105575 -10389399 + (CCG)n Simple_repeat Simple_repeat 3 56 0 1 1295 312 226 16 50 chr15 93105635 93105756 -10389218 + (CCCCG)n Simple_repeat Simple_repeat 2 118 0 1 1295 505 313 122 17 chr15 93106463 93106819 -10388155 + RMER5 LTR ERV1 97 521 -13 1 1295 299 294 17 84 chr15 93107735 93107854 -10387120 - L2c LINE L2 0 3387 3277 1 1295 476 313 0 15 chr15 93108042 93108175 -10386799 + B1F SINE Alu 13 143 -6 1 1295 26 0 0 0 chr15 93108382 93108408 -10386566 + AT_rich Low_complexity Low_complexity 1 26 0 1 1295 506 295 0 0 chr15 93108929 93109051 -10385923 + B3A SINE B2 29 150 -48 1 1295 230 115 0 19 chr15 93109061 93109114 -10385860 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1295 242 293 93 0 chr15 93109373 93109448 -10385526 + B4A SINE B4 86 167 -125 1 1295 362 279 37 37 chr15 93109382 93109490 -10385484 + PB1D10 SINE Alu 10 117 0 1 1295 432 248 97 8 chr15 93109507 93109641 -10385333 + B1_Mur3 SINE Alu 2 147 -2 1 1295 630 241 137 16 chr15 93110164 93110354 -10384620 + B3 SINE B2 1 213 -3 1 1295 1025 104 88 50 chr15 93110519 93110701 -10384273 + B2_Mm2 SINE B2 1 189 -6 1 1295 960 173 81 5 chr15 93110925 93111111 -10383863 + B3 SINE B2 15 214 -2 1 1295 375 326 26 56 chr15 93111570 93111765 -10383209 + B4 SINE B4 1 189 -103 1 1295 433 294 71 28 chr15 93111795 93111977 -10382997 + B3 SINE B2 8 197 -19 1 1295 459 202 68 68 chr15 93111963 93112096 -10382878 + B1_Mur4 SINE Alu 15 147 -3 2 1295 22 0 0 0 chr15 93112098 93112120 -10382854 + AT_rich Low_complexity Low_complexity 1 22 0 2 1295 207 0 0 0 chr15 93112123 93112146 -10382828 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1295 862 174 14 0 chr15 93112940 93113084 -10381890 - B1_Mur4 SINE Alu -3 147 2 2 1295 327 157 0 0 chr15 93113129 93113199 -10381775 + CT-rich Low_complexity Low_complexity 2 71 0 2 1295 712 209 198 0 chr15 93113638 93113815 -10381159 + B3 SINE B2 1 212 -4 2 1295 767 197 143 5 chr15 93116249 93116438 -10378536 + B3 SINE B2 1 215 -1 2 1295 1135 73 12 6 chr15 93117165 93117331 -10377643 - B2_Mm1t SINE B2 -26 167 1 2 1295 207 204 0 0 chr15 93117938 93117982 -10376992 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1295 522 247 92 81 chr15 93118578 93118851 -10376123 + B4A SINE B4 5 280 -12 2 1295 326 328 74 7 chr15 93119008 93119143 -10375831 - MER5A DNA MER1_type -23 166 23 2 1295 917 196 132 5 chr15 93119146 93119366 -10375608 - RMER15 LTR ERVL -1 574 327 2 1295 2526 198 242 0 chr15 93119396 93119731 -10375243 + RMER21A LTR ERV1 50 471 -476 2 1295 1156 70 103 23 chr15 93119731 93119906 -10375068 + B2_Mm2 SINE B2 2 190 -5 2 1295 2526 198 242 0 chr15 93119906 93120288 -10374686 + RMER21A LTR ERV1 472 940 -7 2 1295 1408 157 62 31 chr15 93120299 93120621 -10374353 - RMER15 LTR ERVL -243 332 1 2 1295 722 223 56 52 chr15 93121521 93121734 -10373240 + B3 SINE B2 2 215 -1 2 1295 1108 65 0 0 chr15 93121818 93121972 -10373002 + B2_Mm2 SINE B2 3 156 -39 2 1295 305 293 111 0 chr15 93122747 93122846 -10372128 + ORR1E LTR MaLR 36 145 -214 2 1295 210 196 0 35 chr15 93122902 93122960 -10372014 + A-rich Low_complexity Low_complexity 2 57 0 2 1295 1133 288 32 12 chr15 93123245 93123589 -10371385 + Lx8 LINE L1 6879 7229 -244 2 1295 1782 244 93 11 chr15 93124949 93125475 -10369499 + Lx7 LINE L1 6725 7293 -403 2 1295 186 43 0 0 chr15 93125534 93125557 -10369417 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1295 189 0 0 0 chr15 93125591 93125612 -10369362 + (GA)n Simple_repeat Simple_repeat 1 21 0 2 1295 279 216 66 33 chr15 93125628 93125719 -10369255 + Lx7 LINE L1 7602 7695 -1 2 1295 542 242 120 6 chr15 93126182 93126365 -10368609 + MLT1F LTR MaLR 186 389 -159 2 1295 250 315 18 53 chr15 93126387 93126501 -10368473 - ID_B1 SINE B4 -31 193 84 2 1295 256 300 38 0 chr15 93126422 93126502 -10368472 - PB1D9 SINE Alu -36 84 2 2 1295 207 0 0 0 chr15 93126622 93126645 -10368329 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1295 774 196 99 85 chr15 93126859 93127008 -10367966 + URR1A DNA MER1_type 1 155 -71 2 1295 1180 55 0 0 chr15 93127008 93127153 -10367821 + B1_Mus2 SINE Alu 1 145 -2 2 1295 297 0 0 0 chr15 93127153 93127186 -10367788 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2 1295 774 196 99 85 chr15 93127186 93127258 -10367716 + URR1A DNA MER1_type 156 225 -1 2 1295 510 316 31 6 chr15 93127324 93127483 -10367491 - RSINE1 SINE B4 0 165 3 2 1295 1175 62 0 20 chr15 93128162 93128311 -10366663 - B1_Mm SINE Alu -1 146 1 2 1295 269 0 56 0 chr15 93129212 93129248 -10365726 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 2 1295 790 301 17 38 chr15 93129638 93129928 -10365046 + B4A SINE B4 6 289 -3 2 1295 280 274 47 12 chr15 93130695 93130780 -10364194 - MIR SINE MIR -7 255 168 2 1295 257 330 19 37 chr15 93131000 93131107 -10363867 - PB1D10 SINE Alu -1 116 12 2 1295 224 374 0 0 chr15 93131268 93131359 -10363615 + (TG)n Simple_repeat Simple_repeat 1 91 0 2 1295 808 279 43 21 chr15 93131367 93131649 -10363325 - B4 SINE B4 -4 288 1 2 1295 532 233 44 22 chr15 93132313 93132449 -10362525 - RSINE1 SINE B4 -14 151 13 2 1295 219 256 66 11 chr15 93132613 93132704 -10362270 + B4 SINE B4 44 139 -153 2 1295 685 214 14 20 chr15 93133029 93133177 -10361797 + B1_Mur1 SINE Alu 2 148 -1 2 1295 279 188 31 0 chr15 93133673 93133737 -10361237 - B3 SINE B2 -6 210 145 2 1295 236 306 14 27 chr15 93133850 93133924 -10361050 + ID4_ SINE ID 2 74 -9 2 1295 217 261 0 0 chr15 93134411 93134457 -10360517 + RSINE1 SINE B4 16 61 -104 2 1295 407 188 0 12 chr15 93135224 93135305 -10359669 + B3A SINE B2 1 80 -118 2 1295 1242 54 0 0 chr15 93135479 93135627 -10359347 + B1_Mus1 SINE Alu 1 148 0 2 1295 233 191 32 0 chr15 93135647 93135710 -10359264 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 1295 484 292 115 12 chr15 93136055 93136308 -10358666 + B4A SINE B4 5 283 -9 2 1295 195 42 0 0 chr15 93136548 93136572 -10358402 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2 1295 1048 88 0 75 chr15 93136580 93136739 -10358235 - B1_Mus1 SINE Alu 0 148 2 2 1295 407 260 169 23 chr15 93136987 93137117 -10357857 + B1_Mur1 SINE Alu 1 149 0 2 1295 554 196 54 0 chr15 93137121 93137233 -10357741 + PB1D9 SINE Alu 2 119 -1 2 1295 201 178 0 0 chr15 93137233 93137278 -10357696 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 2 1295 276 62 0 0 chr15 93137892 93137924 -10357050 + L1_Mur2 LINE L1 236 267 -6445 2 1295 24 109 0 0 chr15 93138973 93139074 -10355900 + AT_rich Low_complexity Low_complexity 1 101 0 2 1295 391 236 104 0 chr15 93139214 93139320 -10355654 + B1_Mur2 SINE Alu 33 149 0 2 1295 643 248 112 32 chr15 93139554 93139804 -10355170 + B4 SINE B4 4 273 -19 2 1295 504 0 0 0 chr15 93139812 93139868 -10355106 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 1295 240 234 175 14 chr15 93139997 93140140 -10354834 - L1ME3 LINE L1 -228 5934 5769 2 1295 221 282 12 71 chr15 93140670 93140754 -10354220 + RSINE1 SINE B4 86 164 -1 2 1295 1684 146 212 81 chr15 93140754 93140990 -10353984 - MTC LTR MaLR 0 421 210 2 1295 1158 41 0 45 chr15 93140990 93141144 -10353830 - B1_Mus2 SINE Alu 0 147 1 2 1295 1684 146 212 81 chr15 93141144 93141279 -10353695 - MTC LTR MaLR -212 209 1 2 1295 293 0 56 37 chr15 93141404 93141458 -10353516 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 2 1295 1070 66 7 0 chr15 93141458 93141595 -10353379 - B1_Mus2 SINE Alu -9 138 1 2 1295 42 48 0 0 chr15 93141906 93141969 -10353005 + AT_rich Low_complexity Low_complexity 1 63 0 2 1295 281 178 0 0 chr15 93142285 93142330 -10352644 + L1_Rod LINE L1 62 106 -7066 2 1295 2381 195 28 14 chr15 93142433 93142937 -10352037 + L1_Rod LINE L1 113 623 -6549 2 1295 717 217 27 27 chr15 93142970 93143117 -10351857 + B1_Mur2 SINE Alu 1 147 -2 2 1295 386 312 229 21 chr15 93143182 93143751 -10351223 + Lx9 LINE L1 6920 7606 -38 2 1295 497 144 11 0 chr15 93144339 93144429 -10350545 + CT-rich Low_complexity Low_complexity 2 92 0 2 1295 297 0 0 0 chr15 93144429 93144462 -10350512 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1295 426 246 40 42 chr15 93144467 93144645 -10350329 + L1MB1 LINE L1 5675 5852 -316 2 1295 259 169 235 69 chr15 93144860 93144962 -10350012 - PB1 SINE Alu -8 119 1 2 1295 5121 75 14 0 chr15 93145604 93146273 -10348701 + Lx3_Mus LINE L1 6332 7009 0 2 1295 795 21 0 0 chr15 93146524 93146617 -10348357 + (GGGGA)n Simple_repeat Simple_repeat 1 93 0 2 1295 284 272 62 0 chr15 93146824 93146905 -10348069 + PB1D10 SINE Alu 1 86 -31 2 1295 409 304 0 0 chr15 93146837 93146962 -10348012 + ID_B1 SINE B4 100 224 0 2 1295 1427 84 5 10 chr15 93147000 93147193 -10347781 + B2_Mm1t SINE B2 1 192 -1 2 1295 272 279 106 0 chr15 93147290 93147394 -10347580 + PB1D10 SINE Alu 2 116 -1 2 1295 243 0 0 0 chr15 93147676 93147703 -10347271 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 2 1295 1429 77 16 0 chr15 93148300 93148482 -10346492 - B2_Mm2 SINE B2 -9 186 2 2 1295 839 155 226 17 chr15 93148635 93148812 -10346162 - B3 SINE B2 -1 215 2 2 1295 795 204 14 0 chr15 93149655 93149802 -10345172 - B1_Mur3 SINE Alu 0 149 1 2 1295 498 210 10 0 chr15 93150465 93150565 -10344409 + B1_Mur4 SINE Alu 50 150 0 2 1295 221 286 111 28 chr15 93150612 93150720 -10344254 + PB1D10 SINE Alu 1 117 0 2 1295 399 277 27 0 chr15 93150721 93150833 -10344141 + B1F SINE Alu 3 117 -32 2 1295 260 264 11 75 chr15 93150871 93150965 -10344009 + ID SINE ID 1 88 -136 2 1295 739 275 10 0 chr15 93151609 93151802 -10343172 - B3 SINE B2 -1 215 21 2 1295 295 310 14 0 chr15 93152112 93152183 -10342791 + RSINE1 SINE B4 23 94 -71 2 1295 216 67 0 0 chr15 93152812 93152842 -10342132 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 1295 769 46 37 0 chr15 93152853 93152961 -10342013 - B2_Mm2 SINE B2 -83 112 1 2 1295 22 35 0 0 chr15 93153127 93153156 -10341818 + AT_rich Low_complexity Low_complexity 1 29 0 2 1295 1168 115 15 35 chr15 93154173 93154371 -10340603 + B2_Mm2 SINE B2 2 195 0 2 1295 222 37 0 0 chr15 93155337 93155364 -10339610 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1295 2122 129 90 13 chr15 93155371 93155749 -10339225 - MTB_Mm LTR MaLR 0 407 1 2 1295 628 151 37 33 chr15 93155996 93156146 -10338828 + B1_Mus1 SINE Alu 1 148 0 2 1295 240 270 0 0 chr15 93156243 93156306 -10338668 - PB1D10 SINE Alu -54 63 1 2 1295 395 308 155 49 chr15 93157597 93157881 -10337093 + RMER15-int LTR ERVL 1518 1831 -3168 2 1295 915 212 45 5 chr15 93157964 93158187 -10336787 + MTD LTR MaLR 52 283 -136 2 1295 457 304 61 24 chr15 93158411 93158623 -10336351 + RMER15-int LTR ERVL 2336 2555 -2444 2 1295 201 167 0 0 chr15 93158666 93158702 -10336272 + A-rich Low_complexity Low_complexity 1 36 0 2 1295 754 308 57 31 chr15 93158742 93159091 -10335883 + RMER15-int LTR ERVL 4352 4709 -290 2 1295 469 308 93 68 chr15 93159150 93159460 -10335514 + Lx8 LINE L1 6779 7096 -377 2 1295 277 300 75 0 chr15 93159596 93159716 -10335258 + RMER15 LTR ERVL 432 560 -15 2 1295 1048 190 19 23 chr15 93160361 93160576 -10334398 - B3 SINE B2 -2 214 1 2 1295 1270 302 87 85 chr15 93160927 93161150 -10333824 - Charlie1a DNA MER1_type -207 1248 1027 3 1295 374 292 0 26 chr15 93161150 93161266 -10333708 - PB1D10 SINE Alu 0 117 5 3 1295 1270 302 87 85 chr15 93161266 93161938 -10333036 - Charlie1a DNA MER1_type -429 1026 351 3 1295 860 272 9 5 chr15 93162637 93162851 -10332123 - B3 SINE B2 -1 215 1 3 1295 447 243 19 0 chr15 93163526 93163629 -10331345 + PB1D7 SINE Alu 11 115 -5 3 1295 422 347 17 11 chr15 93163993 93164251 -10330723 + (TATG)n Simple_repeat Simple_repeat 1 259 0 3 1295 255 397 20 7 chr15 93164230 93164382 -10330592 + (CATA)n Simple_repeat Simple_repeat 3 156 0 3 1295 207 69 0 0 chr15 93164816 93164845 -10330129 + (G)n Simple_repeat Simple_repeat 1 29 0 3 1295 261 0 0 0 chr15 93165107 93165136 -10329838 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1295 255 79 0 0 chr15 93165422 93165460 -10329514 + (A)n Simple_repeat Simple_repeat 1 38 0 3 1295 212 131 0 21 chr15 93166437 93166484 -10328490 + C-rich Low_complexity Low_complexity 3 48 0 3 1295 251 178 45 45 chr15 93166611 93166723 -10328251 + (CCG)n Simple_repeat Simple_repeat 3 114 0 3 1295 22 0 0 0 chr15 93166725 93166747 -10328227 + GC_rich Low_complexity Low_complexity 1 22 0 3 1295 201 85 48 48 chr15 93166941 93167003 -10327971 + (CCCCG)n Simple_repeat Simple_repeat 5 66 0 3 1295 223 177 0 48 chr15 93167064 93167147 -10327827 + (CCGCG)n Simple_repeat Simple_repeat 2 80 0 3 1295 27 29 0 0 chr15 93167150 93167184 -10327790 + GC_rich Low_complexity Low_complexity 1 34 0 3 1295 372 43 0 0 chr15 93167310 93167356 -10327618 + (CCG)n Simple_repeat Simple_repeat 1 46 0 3 1295 466 280 53 12 chr15 93168234 93168404 -10326570 - MER44D DNA MER2_type -528 177 1 3 1295 694 230 53 155 chr15 93168749 93169012 -10325962 - MLT1B LTR MaLR -27 363 130 3 1295 180 0 0 0 chr15 93169012 93169032 -10325942 + (TC)n Simple_repeat Simple_repeat 1 20 0 3 1295 686 204 157 70 chr15 93169036 93169118 -10325856 - B3 SINE B2 -13 203 97 3 1295 180 0 0 0 chr15 93169118 93169138 -10325836 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1295 1191 42 0 7 chr15 93169138 93169283 -10325691 - B1_Mm SINE Alu -3 144 1 3 1295 686 204 157 70 chr15 93169283 93169384 -10325590 - B3 SINE B2 -120 96 4 3 1295 694 230 53 155 chr15 93169384 93169419 -10325555 - MLT1B LTR MaLR -261 129 91 3 1295 228 70 70 0 chr15 93169460 93169503 -10325471 + B2_Mm2 SINE B2 142 187 -8 3 1295 1196 171 252 18 chr15 93169709 93170042 -10324932 + MTD LTR MaLR 1 411 -8 3 1295 519 347 87 24 chr15 93170078 93170492 -10324482 - ERVL-E-int LTR ERVL -540 5127 4688 3 1295 897 284 14 40 chr15 93170523 93170724 -10324250 - B4A SINE B4 -2 290 92 3 1295 1677 36 0 0 chr15 93170724 93170916 -10324058 - B2_Mm1a SINE B2 -1 192 1 3 1295 897 284 14 40 chr15 93170916 93171011 -10323963 - B4A SINE B4 -201 91 3 3 1295 429 268 0 26 chr15 93171112 93171227 -10323747 + PB1D7 SINE Alu 3 114 -6 3 1295 1037 326 107 34 chr15 93171461 93172217 -10322757 - ERVL-E-int LTR ERVL -1301 4366 3556 3 1295 1259 119 11 0 chr15 93172568 93172745 -10322229 + B2_Mm1t SINE B2 1 179 -14 3 1295 189 0 0 0 chr15 93172746 93172767 -10322207 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 3 1295 186 43 0 0 chr15 93173097 93173120 -10321854 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1295 376 261 69 9 chr15 93173236 93173352 -10321622 - ID_B1 SINE B4 -4 220 98 3 1295 369 0 0 0 chr15 93173379 93173420 -10321554 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1295 333 182 0 0 chr15 93173461 93173516 -10321458 - B3A SINE B2 -123 75 21 3 1295 736 109 0 0 chr15 93173519 93173629 -10321345 - B1_Mus1 SINE Alu -38 110 1 3 1295 1294 80 42 16 chr15 93173634 93173824 -10321150 - B2_Mm2 SINE B2 0 195 1 3 1295 1353 66 11 16 chr15 93174232 93174418 -10320556 - B2_Mm2 SINE B2 -10 185 1 3 1295 811 169 42 0 chr15 93174744 93174886 -10320088 + B1_Mur2 SINE Alu 2 149 0 3 1295 479 214 29 0 chr15 93175114 93175217 -10319757 + U6 snRNA snRNA 1 106 -1 3 1295 216 321 0 0 chr15 93175791 93175847 -10319127 - B4 SINE B4 -152 140 85 3 1295 593 157 124 0 chr15 93175997 93176118 -10318856 + B1_Mur1 SINE Alu 7 142 -7 3 1295 229 121 0 0 chr15 93176266 93176299 -10318675 + B3A SINE B2 3 35 -163 3 1295 1020 103 11 11 chr15 93176299 93176475 -10318499 + Lx LINE L1 6473 6648 -6 3 1295 1236 41 0 0 chr15 93176483 93176629 -10318345 + B1_Mm SINE Alu 1 146 -1 3 1295 276 244 0 0 chr15 93176630 93176716 -10318258 + A-rich Low_complexity Low_complexity 1 86 0 3 1295 884 102 42 48 chr15 93176716 93176881 -10318093 + B2_Mm2 SINE B2 27 190 -5 3 1295 2935 151 12 136 chr15 93176995 93177649 -10317325 + RMER15 LTR ERVL 3 575 0 3 1295 360 0 0 0 chr15 93177720 93177760 -10317214 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1295 243 146 0 0 chr15 93177862 93177903 -10317071 + (TCCA)n Simple_repeat Simple_repeat 3 43 0 3 1295 578 316 42 31 chr15 93177908 93178101 -10316873 - B4 SINE B4 -69 223 29 3 1295 361 254 40 88 chr15 93178112 93178237 -10316737 - RMER10B LTR ERVL -10 388 270 3 1295 263 274 54 40 chr15 93178954 93179049 -10315925 - PB1D10 SINE Alu -19 101 5 3 1295 2051 116 27 39 chr15 93179210 93179541 -10315433 - ORR1A2 LTR MaLR 0 327 1 3 1295 2052 115 9 26 chr15 93179596 93179987 -10314987 - RLTR31_Mm LTR ERVK -169 384 1 3 1295 3270 202 109 33 chr15 93179989 93181205 -10313769 - RMER3D-int LTR ERVK -2 2840 1532 3 1295 644 142 35 26 chr15 93181237 93181353 -10313621 - RMER3D-int LTR ERVK -1310 1532 1416 3 1295 242 228 10 61 chr15 93181354 93181452 -10313522 - RLTR31_Mm LTR ERVK -371 190 98 3 1295 814 192 14 0 chr15 93181454 93181600 -10313374 - B1_Mus1 SINE Alu 0 148 1 3 1295 328 249 101 78 chr15 93181600 93181779 -10313195 - L1MB2 LINE L1 -42 6129 5947 3 1295 26495 133 22 17 chr15 93181868 93183426 -10311548 + Lx LINE L1 583 2159 -3724 3 1295 4235 56 0 2 chr15 93183426 93183930 -10311044 + RLTR1C LTR ERV1 1 503 0 3 1295 26495 145 19 27 chr15 93183930 93184697 -10310277 + Lx LINE L1 2160 2884 -2999 3 1295 1184 62 0 0 chr15 93184697 93184842 -10310132 + B1_Mus2 SINE Alu 3 147 0 3 1295 26495 145 19 27 chr15 93184842 93187069 -10307905 + Lx LINE L1 2885 5106 -777 3 1295 1231 48 0 0 chr15 93187069 93187216 -10307758 + B1_Mm SINE Alu 1 147 0 3 1295 26495 108 29 9 chr15 93187216 93188707 -10306267 + Lx LINE L1 5107 6629 -25 3 1295 1149 64 0 0 chr15 93188718 93188858 -10306116 + B1_Mus2 SINE Alu 2 141 -6 3 1295 540 0 0 0 chr15 93188859 93188919 -10306055 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 1295 493 301 217 0 chr15 93189083 93189281 -10305693 - MTE2b LTR MaLR -138 241 1 3 1295 416 262 37 18 chr15 93189290 93189453 -10305521 - L1MB2 LINE L1 -441 5742 5577 3 1295 613 252 6 30 chr15 93189739 93189903 -10305071 - B3A SINE B2 -36 162 3 3 1295 1670 184 58 19 chr15 93189979 93190339 -10304635 - ORR1D1 LTR MaLR 0 374 1 3 1295 344 283 11 11 chr15 93190430 93190523 -10304451 + B1F1 SINE Alu 16 108 -41 3 1295 21 0 0 0 chr15 93190575 93190596 -10304378 + AT_rich Low_complexity Low_complexity 1 21 0 3 1295 233 211 171 86 chr15 93190711 93190851 -10304123 - MT2A LTR ERVL -112 421 270 3 1295 468 51 0 0 chr15 93191329 93191388 -10303586 + (TTA)n Simple_repeat Simple_repeat 2 60 0 3 1295 339 93 0 36 chr15 93191525 93191581 -10303393 + ID_B1 SINE B4 166 219 -5 3 1295 364 208 311 0 chr15 93191972 93192078 -10302896 - ID_B1 SINE B4 0 224 86 3 161 14159 65 5 18 chr15 93192100 93194267 -10300707 - L1_Mus1 LINE L1 -2 6565 4437 3 1296 1098 96 7 0 chr15 93194267 93194413 -10300561 - B1_Mus2 SINE Alu 0 147 1 3 1296 14159 84 3 26 chr15 93194413 93194897 -10300077 - L1_Mus1 LINE L1 -1447 4436 3958 3 1296 1048 28 16 43 chr15 93194897 93195082 -10299892 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1296 207 0 0 0 chr15 93195082 93195104 -10299870 + (GA)n Simple_repeat Simple_repeat 1 23 0 3 1296 1453 74 0 16 chr15 93195337 93195530 -10299444 - B2_Mm2 SINE B2 -4 191 2 3 1296 465 296 162 15 chr15 93196091 93196362 -10298612 - MLT1F2 LTR MaLR -86 474 164 3 1296 241 176 0 26 chr15 93196414 93196490 -10298484 + (TG)n Simple_repeat Simple_repeat 1 74 0 3 1296 648 157 26 22 chr15 93196566 93196839 -10298135 + (TG)n Simple_repeat Simple_repeat 1 274 0 3 1296 312 27 0 0 chr15 93196867 93196904 -10298070 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 1296 452 287 99 66 chr15 93196917 93197189 -10297785 - B4 SINE B4 -11 281 1 3 1296 183 80 0 0 chr15 93197422 93197447 -10297527 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 1296 596 245 0 55 chr15 93197770 93197934 -10297040 - RLTR20C LTR ERVK -2 576 422 3 1296 821 194 208 31 chr15 93197936 93198196 -10296778 - RLTR20C LTR ERVK -228 306 1 3 1296 1274 91 17 0 chr15 93198696 93198872 -10296102 + B2_Mm1t SINE B2 1 179 -14 3 1296 327 111 0 36 chr15 93198919 93198975 -10295999 + B2_Mm2 SINE B2 47 100 -95 3 1296 312 27 0 0 chr15 93199015 93199052 -10295922 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 1296 1912 243 138 81 chr15 93199224 93200038 -10294936 + RMER13A LTR ERVK 1 860 0 3 1296 959 79 72 0 chr15 93200809 93200961 -10294013 - B2_Mm1t SINE B2 -8 185 23 3 1296 1132 55 7 0 chr15 93201195 93201340 -10293634 - B1_Mm SINE Alu 0 147 2 3 1296 203 0 37 0 chr15 93201391 93201418 -10293556 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 1296 1907 144 20 12 chr15 93201480 93201824 -10293150 - ORR1B1 LTR MaLR -1 393 47 3 1296 1391 64 26 31 chr15 93201921 93202114 -10292860 + B2_Mm2 SINE B2 3 194 -1 3 1296 1202 55 0 7 chr15 93202177 93202325 -10292649 + B1_Mus2 SINE Alu 1 147 0 3 1296 184 0 30 61 chr15 93202325 93202358 -10292616 + (CAAAAA)n Simple_repeat Simple_repeat 5 36 0 3 1296 889 171 72 0 chr15 93202419 93202600 -10292374 - B2_Mm2 SINE B2 -1 194 1 3 1296 222 118 0 0 chr15 93204356 93204390 -10290584 + (T)n Simple_repeat Simple_repeat 1 34 0 3 1296 1115 82 0 0 chr15 93204924 93205082 -10289892 + B2_Mm2 SINE B2 1 158 -37 3 1296 243 88 0 0 chr15 93205083 93205117 -10289857 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 3 1296 774 229 104 0 chr15 93205356 93205539 -10289435 - B3 SINE B2 0 216 15 3 1296 1049 90 83 6 chr15 93205549 93205717 -10289257 - B2_Mm2 SINE B2 -14 181 1 4 1296 228 137 0 0 chr15 93205744 93205795 -10289179 + (T)n Simple_repeat Simple_repeat 1 51 0 4 1296 1133 37 0 0 chr15 93205880 93206015 -10288959 + B1_Mus2 SINE Alu 1 135 -12 4 1296 198 0 0 0 chr15 93206015 93206037 -10288937 + (G)n Simple_repeat Simple_repeat 1 22 0 4 1296 506 254 8 17 chr15 93206038 93206158 -10288816 - RSINE1 SINE B4 -43 122 4 4 1296 1459 176 21 219 chr15 93206230 93206393 -10288581 + ORR1C2 LTR MaLR 1 165 -219 4 1296 797 154 23 8 chr15 93206393 93206524 -10288450 + B1_Mus2 SINE Alu 3 135 -12 4 1296 288 0 0 0 chr15 93206524 93206556 -10288418 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 4 1296 1459 176 21 219 chr15 93206556 93206870 -10288104 + ORR1C2 LTR MaLR 166 383 -1 4 1296 270 81 0 0 chr15 93207060 93207097 -10287877 + (A)n Simple_repeat Simple_repeat 1 37 0 4 1296 1067 76 14 27 chr15 93207176 93207324 -10287650 - B1_Mus2 SINE Alu 0 147 2 4 1296 692 54 0 11 chr15 93207390 93207484 -10287490 + (GGAAA)n Simple_repeat Simple_repeat 3 95 0 4 1296 284 281 125 0 chr15 93207522 93207618 -10287356 + RSINE1 SINE B4 11 118 -47 4 1296 425 19 19 0 chr15 93207629 93207683 -10287291 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1296 1097 205 316 64 chr15 93208300 93208753 -10286221 + RMER2 LTR ERV1 1 567 0 4 1296 342 0 0 0 chr15 93208851 93208889 -10286085 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 4 1296 271 136 0 0 chr15 93208907 93208951 -10286023 - B2_Mm2 SINE B2 -94 101 58 4 1296 546 40 13 0 chr15 93208967 93209042 -10285932 - B1_Mus2 SINE Alu 0 147 72 4 1296 1083 79 0 0 chr15 93209130 93209282 -10285692 - B2_Mm2 SINE B2 -26 169 18 4 1296 600 141 41 8 chr15 93209257 93209379 -10285595 + B2_Mm2 SINE B2 70 195 0 4 1296 286 53 0 0 chr15 93209491 93209529 -10285445 + B1_Mus1 SINE Alu 1 38 -110 4 1296 225 0 0 0 chr15 93209532 93209557 -10285417 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 1296 621 0 0 0 chr15 93209717 93209786 -10285188 + (TC)n Simple_repeat Simple_repeat 1 69 0 4 1296 759 141 11 16 chr15 93209805 93209949 -10285025 - B2_Mm2 SINE B2 -42 156 2 4 1296 211 85 0 41 chr15 93210062 93210111 -10284863 + (TTTTTG)n Simple_repeat Simple_repeat 1 47 0 4 1296 1131 70 0 0 chr15 93210113 93210256 -10284718 - B1_Mm SINE Alu 0 147 5 4 1296 213 125 0 82 chr15 93210266 93210327 -10284647 + T-rich Low_complexity Low_complexity 2 57 0 4 1296 380 186 0 0 chr15 93210349 93210419 -10284555 - B1_Mur1 SINE Alu -21 128 59 4 1296 360 0 0 0 chr15 93211022 93211062 -10283912 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1296 1666 125 138 25 chr15 93211065 93211392 -10283582 - ORR1B1 LTR MaLR -8 386 23 4 1296 2310 136 198 27 chr15 93211723 93212073 -10282901 + RMER2 LTR ERV1 1 398 -169 4 1296 180 0 0 0 chr15 93212073 93212093 -10282881 + (CCA)n Simple_repeat Simple_repeat 1 20 0 4 1296 2310 136 198 27 chr15 93212093 93212226 -10282748 + RMER2 LTR ERV1 399 566 -1 4 1296 519 195 99 23 chr15 93212251 93212382 -10282592 + ID_B1 SINE B4 84 224 0 4 1296 1223 20 7 26 chr15 93212727 93212878 -10282096 - B1_Mus1 SINE Alu 0 148 1 4 1296 269 178 0 19 chr15 93212886 93212945 -10282029 - PB1D9 SINE Alu -5 115 55 4 1296 390 305 43 43 chr15 93212994 93213155 -10281819 - B3A SINE B2 -11 187 27 4 1296 347 233 20 7 chr15 93213178 93213329 -10281645 + CT-rich Low_complexity Low_complexity 3 155 0 4 1296 323 292 9 0 chr15 93213341 93213448 -10281526 - B1F2 SINE Alu -33 116 9 4 1296 181 162 0 68 chr15 93213707 93213780 -10281194 + (TCTCTG)n Simple_repeat Simple_repeat 1 68 0 4 1296 354 235 96 73 chr15 93213832 93214052 -10280922 - L1M5 LINE L1 -1425 4721 4497 4 1296 603 122 111 9 chr15 93214057 93214165 -10280809 - PB1D9 SINE Alu -1 119 1 4 1296 1186 78 12 0 chr15 93214291 93214458 -10280516 + B2_Mm2 SINE B2 9 177 -18 4 1296 459 258 0 57 chr15 93214469 93214609 -10280365 - RSINE1 SINE B4 -33 132 1 4 1296 1145 68 7 0 chr15 93214915 93215061 -10279913 + B1_Mus1 SINE Alu 2 148 0 4 1296 208 87 42 42 chr15 93215061 93215133 -10279841 + A-rich Low_complexity Low_complexity 1 72 0 4 1296 1044 36 62 35 chr15 93215290 93215435 -10279539 - B1_Mur4 SINE Alu 0 150 2 4 1296 518 158 0 0 chr15 93216056 93216138 -10278836 + B3 SINE B2 1 82 -134 4 1296 1192 61 0 7 chr15 93216328 93216476 -10278498 - B1_Mm SINE Alu 0 147 1 4 1296 22 56 0 0 chr15 93216554 93216590 -10278384 + AT_rich Low_complexity Low_complexity 1 36 0 4 1296 280 239 103 26 chr15 93216920 93217036 -10277938 - ID_B1 SINE B4 -99 125 1 4 1296 183 80 0 0 chr15 93217039 93217064 -10277910 + (TTCTG)n Simple_repeat Simple_repeat 1 25 0 4 1296 360 281 44 0 chr15 93217064 93217177 -10277797 - B1F SINE Alu -15 134 16 4 1296 250 282 141 0 chr15 93217270 93217348 -10277626 - PB1D10 SINE Alu -28 89 1 4 1296 212 0 0 0 chr15 93217544 93217570 -10277404 + B1_Mus2 SINE Alu 72 97 -50 4 1296 239 222 183 32 chr15 93217615 93217708 -10277266 - PB1D7 SINE Alu -1 119 13 4 1296 201 138 0 0 chr15 93218201 93218230 -10276744 + (TTC)n Simple_repeat Simple_repeat 2 30 0 4 1296 1238 35 0 0 chr15 93218576 93218719 -10276255 + B1_Mus2 SINE Alu 5 147 0 4 1296 189 0 0 0 chr15 93219254 93219275 -10275699 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1296 352 266 101 0 chr15 93219353 93219462 -10275512 + ID_B1 SINE B4 105 224 0 4 1296 255 311 0 86 chr15 93219462 93219578 -10275396 + MT2B LTR ERVL 155 260 -341 4 1296 619 234 29 0 chr15 93219480 93219617 -10275357 + B1_Mur1 SINE Alu 9 149 0 4 1296 261 217 83 0 chr15 93219909 93219969 -10275005 - B1F1 SINE Alu -12 137 73 4 1296 1367 213 22 44 chr15 93220241 93220605 -10274369 + ORR1D1 LTR MaLR 11 366 -8 4 1296 402 244 81 0 chr15 93222120 93222243 -10272731 + ID_B1 SINE B4 90 222 -2 4 1296 680 235 127 11 chr15 93222737 93222926 -10272048 - B3 SINE B2 -3 213 3 4 1296 806 110 17 0 chr15 93222952 93223061 -10271913 + PB1D9 SINE Alu 1 111 -9 4 1296 186 43 0 0 chr15 93223061 93223084 -10271890 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 4 1296 474 305 56 23 chr15 93224061 93224276 -10270698 + B4A SINE B4 34 255 -37 4 1296 682 184 211 26 chr15 93224360 93224550 -10270424 - URR1B DNA MER1_type 0 225 1 4 1296 1515 62 0 20 chr15 93224805 93225002 -10269972 + B2_Mm2 SINE B2 2 194 -1 4 1296 257 349 88 44 chr15 93226608 93226722 -10268252 + PB1D7 SINE Alu 1 119 -1 4 1296 356 281 0 0 chr15 93227054 93227136 -10267838 - ID SINE ID -142 82 1 4 1296 262 152 0 0 chr15 93227249 93227295 -10267679 - B1F1 SINE Alu -88 61 16 4 1296 252 268 20 49 chr15 93227304 93227406 -10267568 + MT2B LTR ERVL 167 265 -336 4 1296 579 143 34 51 chr15 93227315 93227433 -10267541 + B1_Mus2 SINE Alu 29 144 -3 4 1296 183 301 0 0 chr15 93228470 93228543 -10266431 + (CTGGGG)n Simple_repeat Simple_repeat 6 78 0 4 1296 192 184 0 0 chr15 93228826 93228875 -10266099 + (CGG)n Simple_repeat Simple_repeat 1 49 0 4 1296 23 0 0 0 chr15 93228931 93228954 -10266020 + GC_rich Low_complexity Low_complexity 1 23 0 4 1296 1049 55 27 7 chr15 93229418 93229565 -10265409 - B1_Mur4 SINE Alu 0 150 1 4 1296 202 222 0 0 chr15 93230232 93230277 -10264697 + T-rich Low_complexity Low_complexity 1 45 0 4 1296 261 275 71 14 chr15 93230780 93230850 -10264124 - B1_Mur4 SINE Alu -72 78 5 4 1296 627 133 0 54 chr15 93230887 93230998 -10263976 - B1_Mus1 SINE Alu -21 127 23 4 1296 981 264 49 107 chr15 93231632 93231758 -10263216 - RMER5 LTR ERV1 -47 487 385 4 1296 1083 47 0 0 chr15 93231758 93231887 -10263087 - B1_Mus2 SINE Alu -18 129 1 4 1296 981 264 49 107 chr15 93231887 93232248 -10262726 - RMER5 LTR ERV1 -150 384 28 4 1296 1098 122 20 65 chr15 93232907 93233108 -10261866 - B2_Mm2 SINE B2 -1 194 3 4 1296 372 206 27 0 chr15 93233310 93233383 -10261591 + B1_Mus2 SINE Alu 10 84 -63 4 1296 25 51 0 0 chr15 93233569 93233608 -10261366 + AT_rich Low_complexity Low_complexity 1 39 0 4 1296 974 51 7 14 chr15 93233618 93233758 -10261216 + B1_Mus2 SINE Alu 9 147 0 4 1296 207 88 0 0 chr15 93233949 93233983 -10260991 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1296 1145 88 0 0 chr15 93233984 93234131 -10260843 - B1_Mus2 SINE Alu 0 147 1 4 1296 531 282 25 104 chr15 93234134 93234336 -10260638 - B3 SINE B2 -5 211 26 4 1296 322 260 26 0 chr15 93234340 93234417 -10260557 - PB1D10 SINE Alu -37 80 2 4 1296 232 200 0 0 chr15 93234497 93234542 -10260432 + B1F1 SINE Alu 88 132 -17 4 1296 297 0 0 0 chr15 93234698 93234731 -10260243 + (CTTG)n Simple_repeat Simple_repeat 2 34 0 4 1296 1156 58 0 0 chr15 93236282 93236420 -10258554 + B1_Mus2 SINE Alu 1 138 -9 4 1296 1526 165 25 47 chr15 93236456 93236633 -10258341 - MTC LTR MaLR -38 383 211 4 1296 312 27 0 0 chr15 93236633 93236670 -10258304 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 4 1296 1147 58 14 0 chr15 93236672 93236811 -10258163 - B1_Mus1 SINE Alu -6 142 2 4 1296 1526 165 25 47 chr15 93236811 93236948 -10258026 - MTC LTR MaLR -211 210 73 4 1296 236 323 100 10 chr15 93237679 93237779 -10257195 - B4A SINE B4 0 292 184 4 1296 1437 58 16 5 chr15 93237857 93238048 -10256926 - B2_Mm2 SINE B2 0 195 3 4 1296 1074 213 212 69 chr15 93238064 93238554 -10256420 - RMER4B LTR ERVK -9 576 17 4 1296 2142 151 97 13 chr15 93239269 93239652 -10255322 - MTC LTR MaLR -3 418 4 5 1296 294 143 0 0 chr15 93239827 93239876 -10255098 + (TCC)n Simple_repeat Simple_repeat 2 50 0 5 1296 935 142 7 0 chr15 93239985 93240126 -10254848 - B1_Mur4 SINE Alu -8 142 1 5 1296 1229 103 11 11 chr15 93240157 93240334 -10254640 - B2_Mm2 SINE B2 -18 177 1 5 1296 338 336 97 0 chr15 93240454 93240588 -10254386 + RSINE1 SINE B4 11 157 -8 5 1296 257 253 92 13 chr15 93240701 93240777 -10254197 + B1F1 SINE Alu 7 88 -61 5 1296 442 155 22 8 chr15 93241550 93241639 -10253335 + B1_Mur1 SINE Alu 34 117 0 5 1296 273 258 0 0 chr15 93242106 93242168 -10252806 - ID4_ SINE ID -14 69 8 5 1296 239 288 52 126 chr15 93242187 93242322 -10252652 - PB1 SINE Alu -2 125 1 5 1296 1468 62 16 5 chr15 93242668 93242861 -10252113 - B2_Mm2 SINE B2 0 195 1 5 1296 315 0 0 0 chr15 93242936 93242971 -10252003 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1296 1217 55 0 0 chr15 93244002 93244148 -10250826 + B1_Mus2 SINE Alu 2 147 0 5 1296 195 42 0 0 chr15 93244148 93244172 -10250802 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1296 250 261 78 22 chr15 93244882 93244972 -10250002 + ID_B1 SINE B4 2 96 -128 5 1296 476 279 84 50 chr15 93245058 93245379 -10249595 - RLTR15 LTR ERVK -17 342 11 5 1296 237 33 0 0 chr15 93245519 93245549 -10249425 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5 1296 412 210 193 0 chr15 93245552 93245671 -10249303 - ORR1D2 LTR MaLR -34 336 195 5 1296 24 0 0 0 chr15 93245671 93245695 -10249279 + AT_rich Low_complexity Low_complexity 1 24 0 5 1296 729 116 37 37 chr15 93245695 93245856 -10249118 - RMER17B LTR ERVK -502 456 296 5 1296 644 308 77 28 chr15 93245798 93246045 -10248929 - ORR1D2 LTR MaLR -111 259 1 5 1296 606 231 37 47 chr15 93246335 93246526 -10248448 + B3A SINE B2 1 189 -9 5 1296 1340 41 111 0 chr15 93246571 93246742 -10248232 - L1_Mus1 LINE L1 -1 6566 6377 5 1296 532 128 0 11 chr15 93247163 93247258 -10247716 - ORR1B1 LTR MaLR 0 394 301 5 1296 2657 201 78 20 chr15 93247260 93248174 -10246800 - L1_Rod LINE L1 -4330 1517 550 5 1296 21 36 0 0 chr15 93248330 93248358 -10246616 + AT_rich Low_complexity Low_complexity 1 28 0 5 1296 28 29 0 0 chr15 93248401 93248436 -10246538 + AT_rich Low_complexity Low_complexity 1 35 0 5 1296 714 228 20 56 chr15 93248556 93248751 -10246223 - B3 SINE B2 -10 206 19 5 1296 603 289 13 0 chr15 93248893 93249042 -10245932 + RSINE1 SINE B4 4 154 -11 5 1296 26 0 0 0 chr15 93249052 93249078 -10245896 + AT_rich Low_complexity Low_complexity 1 26 0 5 1296 318 239 92 25 chr15 93249446 93249566 -10245408 + B1F SINE Alu 22 149 0 5 1296 609 244 65 40 chr15 93249736 93249937 -10245037 - B3 SINE B2 -10 206 1 5 1296 706 286 32 21 chr15 93250264 93250450 -10244524 - B3 SINE B2 0 216 29 5 1296 220 311 33 0 chr15 93251085 93251175 -10243799 - PB1D10 SINE Alu -7 113 21 5 1296 226 279 0 29 chr15 93252349 93252419 -10242555 + ID2 SINE ID 16 83 0 5 1296 296 135 0 13 chr15 93252721 93252796 -10242178 + (TTTTTA)n Simple_repeat Simple_repeat 2 75 0 5 1296 1166 68 0 0 chr15 93252798 93252945 -10242029 - B1_Mus2 SINE Alu 0 147 1 5 1296 811 186 27 14 chr15 93252948 93253095 -10241879 - B1_Mur2 SINE Alu 0 149 1 5 1296 716 251 45 5 chr15 93253097 93253297 -10241677 - B3 SINE B2 -8 208 1 5 1296 747 212 78 0 chr15 93253308 93253487 -10241487 - B2_Mm2 SINE B2 -2 193 1 5 1296 201 158 0 0 chr15 93253521 93253559 -10241415 + T-rich Low_complexity Low_complexity 1 38 0 5 1296 1483 63 0 5 chr15 93253560 93253751 -10241223 - B2_Mm1a SINE B2 -3 190 1 5 1296 1019 103 139 0 chr15 93253757 93253922 -10241052 - B2_Mm2 SINE B2 -5 190 3 5 1296 25 51 0 0 chr15 93253957 93253996 -10240978 + AT_rich Low_complexity Low_complexity 1 39 0 5 1296 31 0 0 0 chr15 93254669 93254700 -10240274 + AT_rich Low_complexity Low_complexity 1 31 0 5 1296 1360 68 34 0 chr15 93254707 93254884 -10240090 - B2_Mm1a SINE B2 -9 184 2 5 1296 620 317 65 53 chr15 93255122 93255459 -10239515 + MTE-int LTR MaLR 751 1091 -489 5 1296 482 198 49 16 chr15 93255890 93256013 -10238961 + MTE-int LTR MaLR 1326 1452 -128 5 1296 472 238 76 15 chr15 93256016 93256148 -10238826 + B1_Mur1 SINE Alu 10 149 0 5 1296 232 314 71 0 chr15 93256153 93256223 -10238751 + MTE-int LTR MaLR 1461 1535 -45 5 1296 253 284 27 0 chr15 93256358 93256432 -10238542 + MTEa LTR MaLR 289 364 -15 5 1296 257 124 0 102 chr15 93257152 93257243 -10237731 + T-rich Low_complexity Low_complexity 20 100 0 5 1296 1117 68 7 7 chr15 93257243 93257390 -10237584 - B1_Mus2 SINE Alu 0 147 1 5 1296 257 124 0 102 chr15 93257390 93257406 -10237568 + T-rich Low_complexity Low_complexity 4 19 0 5 1296 1175 62 0 7 chr15 93257849 93257996 -10236978 + B1_Mm SINE Alu 2 147 0 5 1296 252 59 0 0 chr15 93257996 93258030 -10236944 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1296 217 167 167 0 chr15 93258740 93258806 -10236168 - B1_Mus2 SINE Alu 0 147 71 5 1296 198 191 0 0 chr15 93258810 93258857 -10236117 + CT-rich Low_complexity Low_complexity 4 50 0 5 1296 215 167 103 69 chr15 93258870 93258928 -10236046 - B1_Mur4 SINE Alu -90 60 1 5 1296 217 326 34 34 chr15 93259011 93259100 -10235874 + ID_B1 SINE B4 78 166 -58 5 1296 525 262 48 114 chr15 93259127 93259355 -10235619 - B3A SINE B2 0 216 4 5 1296 450 0 0 0 chr15 93259735 93259785 -10235189 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 1296 1543 57 0 5 chr15 93260076 93260269 -10234705 - B2_Mm2 SINE B2 -2 193 2 5 1296 243 0 0 0 chr15 93260289 93260316 -10234658 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 5 1296 318 258 0 0 chr15 93261361 93261423 -10233551 - ID4_ SINE ID -19 64 3 5 1296 517 286 64 55 chr15 93261811 93262029 -10232945 - ID_B1 SINE B4 -3 221 2 5 1296 400 350 52 56 chr15 93262036 93262287 -10232687 + MLT1A0 LTR MaLR 43 292 -73 5 1296 302 309 91 32 chr15 93262595 93262749 -10232225 + LTR40c LTR ERVL 303 465 0 5 1296 731 126 131 6 chr15 93262826 93262986 -10231988 - ORR1D1 LTR MaLR -192 182 3 5 1296 258 264 128 60 chr15 93263230 93263347 -10231627 - B1_Mus1 SINE Alu -23 125 1 5 1296 231 208 0 20 chr15 93263589 93263638 -10231336 + CT-rich Low_complexity Low_complexity 4 51 0 5 1296 517 164 42 17 chr15 93263647 93263765 -10231209 - B1_Mur4 SINE Alu -20 130 10 5 1296 280 0 0 0 chr15 93263794 93263828 -10231146 + U2 snRNA snRNA 1 34 -154 5 1296 486 303 38 0 chr15 93264216 93264348 -10230626 + RSINE1 SINE B4 4 140 -25 5 1296 247 269 13 0 chr15 93264458 93264536 -10230438 + ID4 SINE ID 2 80 -3 5 1296 299 85 0 21 chr15 93264831 93264879 -10230095 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1296 773 138 41 61 chr15 93264892 93265039 -10229935 - B1_Mur2 SINE Alu -1 148 5 5 1296 1459 70 16 0 chr15 93265406 93265593 -10229381 - B2_Mm1a SINE B2 -3 190 1 5 1296 311 280 75 11 chr15 93265640 93265734 -10229240 - B3A SINE B2 -24 174 75 5 1296 21 0 0 0 chr15 93266283 93266304 -10228670 + GC_rich Low_complexity Low_complexity 1 21 0 5 1296 396 0 0 0 chr15 93267364 93267408 -10227566 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1296 258 224 0 0 chr15 93267410 93267459 -10227515 - ID_B1 SINE B4 -33 191 143 5 1296 792 154 15 0 chr15 93267479 93267609 -10227365 + B1_Mur4 SINE Alu 1 132 -18 5 1296 458 255 86 40 chr15 93267651 93267802 -10227172 - RSINE1 SINE B4 0 165 8 5 1296 231 241 0 0 chr15 93267796 93267854 -10227120 - ID_B1 SINE B4 -71 153 96 5 1296 3099 205 58 40 chr15 93267995 93268607 -10226367 + Lx7 LINE L1 6902 7523 -173 5 1296 1141 68 0 7 chr15 93268607 93268754 -10226220 - B1_Mus2 SINE Alu -1 146 1 5 1296 3099 205 58 40 chr15 93268754 93268919 -10226055 + Lx7 LINE L1 7524 7692 -4 5 1296 361 235 221 29 chr15 93268939 93269075 -10225899 + MTD LTR MaLR 204 365 -54 5 1296 1044 94 141 0 chr15 93270426 93270596 -10224378 + B2_Mm2 SINE B2 2 195 0 5 1296 1417 89 16 0 chr15 93270693 93270883 -10224091 - B2_Mm2 SINE B2 -1 194 2 5 1296 248 284 202 25 chr15 93272632 93272751 -10222223 + B4 SINE B4 134 273 -19 5 1296 760 220 30 99 chr15 93272820 93273052 -10221922 - B3 SINE B2 0 216 1 5 1296 530 56 98 16 chr15 93273088 93273210 -10221764 + ORR1B1 LTR MaLR 41 172 -154 5 1296 228 214 0 0 chr15 93273419 93273475 -10221499 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1296 483 327 64 15 chr15 93273481 93273683 -10221291 - B4 SINE B4 0 292 81 5 1296 299 225 33 33 chr15 93273826 93273918 -10221056 - B4A SINE B4 -196 96 5 5 1296 250 161 15 106 chr15 93274179 93274311 -10220663 + (CTCTG)n Simple_repeat Simple_repeat 2 121 0 5 1296 26 0 0 0 chr15 93274601 93274627 -10220347 + AT_rich Low_complexity Low_complexity 1 26 0 5 1296 421 0 0 68 chr15 93274692 93274766 -10220208 + (CTATA)n Simple_repeat Simple_repeat 1 69 0 5 1296 286 196 18 0 chr15 93274797 93274853 -10220121 - Lx8 LINE L1 -1579 5894 5838 5 1296 2909 93 80 0 chr15 93275166 93275606 -10219368 - IAPLTR2_Mm LTR ERVK 0 475 1 5 1296 700 283 50 121 chr15 93276019 93276417 -10218557 - MTE2a LTR MaLR -3 376 7 5 1296 1445 258 91 68 chr15 93276600 93277252 -10217722 - Lx8 LINE L1 0 7473 6807 5 1296 427 243 97 18 chr15 93277280 93277393 -10217581 - PB1D10 SINE Alu -25 124 3 5 1296 1625 27 5 0 chr15 93278240 93278427 -10216547 + B2_Mm1t SINE B2 2 189 -4 6 1296 6484 121 56 9 chr15 93280443 93281436 -10213538 - Lx LINE L1 -24 6630 5591 6 1296 1233 94 66 0 chr15 93281450 93281631 -10213343 - B2_Mm1t SINE B2 0 193 1 6 1296 235 293 188 36 chr15 93281853 93281991 -10212983 - LTR48 LTR ERV1 -16 771 613 6 1296 207 0 0 0 chr15 93283151 93283174 -10211800 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1296 594 182 251 17 chr15 93283859 93284038 -10210936 - URR1A DNA MER1_type -5 221 1 6 1296 230 81 27 0 chr15 93284164 93284201 -10210773 + (TC)n Simple_repeat Simple_repeat 1 38 0 6 1296 1024 117 12 6 chr15 93284205 93284377 -10210597 + (TTCC)n Simple_repeat Simple_repeat 3 175 0 6 1296 283 207 94 35 chr15 93286787 93286872 -10208102 - PB1D10 SINE Alu -3 114 25 6 1296 37 0 0 0 chr15 93287117 93287154 -10207820 + AT_rich Low_complexity Low_complexity 1 37 0 6 1296 225 150 25 0 chr15 93287212 93287252 -10207722 + B1F SINE Alu 20 60 -89 6 1296 244 141 0 45 chr15 93287420 93287469 -10207505 + T-rich Low_complexity Low_complexity 18 65 0 6 1296 1049 75 0 76 chr15 93287469 93287627 -10207347 - B1_Mus2 SINE Alu 0 147 2 6 1296 244 141 0 45 chr15 93287627 93287644 -10207330 + T-rich Low_complexity Low_complexity 2 17 0 6 1296 372 189 26 37 chr15 93287702 93287830 -10207144 - B3 SINE B2 -70 128 2 6 1296 1151 82 0 0 chr15 93288267 93288413 -10206561 - B1_Mus1 SINE Alu 0 148 3 6 1296 330 252 120 10 chr15 93288501 93288601 -10206373 - MTEa LTR MaLR -265 114 4 6 1296 257 182 29 29 chr15 93289353 93289421 -10205553 + B3 SINE B2 145 212 -4 6 1296 378 0 0 0 chr15 93289684 93289726 -10205248 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 6 1296 1305 30 0 18 chr15 93289726 93289886 -10205088 - B2_Mm1a SINE B2 -33 160 1 6 1296 348 256 47 81 chr15 93290286 93290435 -10204539 + ID_B1 SINE B4 81 224 0 6 1296 558 220 114 0 chr15 93290561 93290693 -10204281 + B1_Mus1 SINE Alu 2 148 0 6 1296 24 53 0 0 chr15 93291067 93291105 -10203869 + AT_rich Low_complexity Low_complexity 1 38 0 6 1296 24 53 0 0 chr15 93291159 93291197 -10203777 + AT_rich Low_complexity Low_complexity 1 38 0 6 1296 1295 92 48 11 chr15 93291262 93291290 -10203684 - B2_Mm2 SINE B2 0 195 159 6 1296 351 0 0 0 chr15 93291290 93291329 -10203645 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 6 1296 1295 92 48 11 chr15 93291329 93291487 -10203487 - B2_Mm2 SINE B2 -37 158 2 6 1296 261 0 0 0 chr15 93291505 93291534 -10203440 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1296 214 307 93 21 chr15 93291550 93291690 -10203284 - RSINE1 SINE B4 -15 150 1 6 1296 375 286 89 15 chr15 93292210 93292345 -10202629 - Lx7 LINE L1 -1134 6339 6195 6 1296 1021 294 82 50 chr15 93292561 93293507 -10201467 - Lx7 LINE L1 -1571 6125 5100 6 1296 890 181 98 0 chr15 93293587 93293792 -10201182 + URR1B DNA MER1_type 1 225 0 6 1296 351 242 180 0 chr15 93293910 93294038 -10200936 + B3 SINE B2 53 203 -13 6 1296 822 193 219 23 chr15 93294041 93294306 -10200668 + MTD LTR MaLR 103 419 0 6 1296 1057 268 216 45 chr15 93294346 93294995 -10199979 - Lx7 LINE L1 -1752 4128 3346 6 1296 324 196 455 0 chr15 93294995 93295138 -10199836 - B3 SINE B2 -6 210 3 6 1296 1057 268 216 45 chr15 93295138 93295317 -10199657 - Lx7 LINE L1 -2535 3345 3158 6 1296 369 231 169 0 chr15 93295788 93295918 -10199056 - B4 SINE B4 -14 278 127 6 1296 305 292 115 0 chr15 93295950 93296063 -10198911 - B1F SINE Alu -18 131 6 6 1296 907 194 33 0 chr15 93296429 93296609 -10198365 - B3 SINE B2 -10 206 21 6 1296 212 243 108 0 chr15 93296973 93297047 -10197927 + PB1D9 SINE Alu 5 86 -34 6 1296 932 191 71 15 chr15 93297547 93297744 -10197230 - B3 SINE B2 -7 209 2 6 1296 286 326 67 20 chr15 93299852 93300002 -10194972 + RSINE1 SINE B4 8 164 -1 6 1296 225 326 10 10 chr15 93300113 93300212 -10194762 - MER5A1 DNA MER1_type -31 135 37 6 1296 433 279 93 26 chr15 93300631 93300782 -10194192 + RSINE1 SINE B4 3 163 -2 6 1296 1259 71 36 0 chr15 93301156 93301324 -10193650 + B2_Mm1t SINE B2 1 174 -19 6 1296 333 330 0 0 chr15 93302611 93302705 -10192269 - RMER15 LTR ERVL -105 470 377 6 1296 1075 268 167 29 chr15 93302711 93303291 -10191683 - Lx8 LINE L1 -235 7238 6579 6 1296 450 0 0 0 chr15 93303865 93303915 -10191059 + (T)n Simple_repeat Simple_repeat 1 50 0 6 1296 663 131 53 99 chr15 93303995 93304147 -10190827 - B1_Mur4 SINE Alu 0 150 6 6 1296 22 0 0 0 chr15 93304580 93304602 -10190372 + AT_rich Low_complexity Low_complexity 1 22 0 6 1296 236 312 12 0 chr15 93304646 93304726 -10190248 - ID4 SINE ID 0 83 3 6 1296 438 290 38 43 chr15 93305513 93305697 -10189277 + ID_B1 SINE B4 1 183 -41 6 1296 22 0 0 0 chr15 93305761 93305783 -10189191 + AT_rich Low_complexity Low_complexity 1 22 0 6 1296 1068 60 0 0 chr15 93308686 93308820 -10186154 - B1_Mus1 SINE Alu -12 136 3 6 1296 22 0 0 0 chr15 93311050 93311072 -10183902 + AT_rich Low_complexity Low_complexity 1 22 0 6 1296 1411 73 17 0 chr15 93311100 93311277 -10183697 + B2_Mm2 SINE B2 2 181 -14 6 1296 225 350 27 60 chr15 93311580 93311729 -10183245 + B4A SINE B4 2 145 -147 6 1296 192 152 0 0 chr15 93312513 93312546 -10182428 + (CATG)n Simple_repeat Simple_repeat 4 36 0 6 1296 405 253 55 0 chr15 93312906 93312997 -10181977 - B1_Mm SINE Alu -51 96 1 6 1296 288 198 89 44 chr15 93313854 93313944 -10181030 + MTEb LTR MaLR 154 247 -132 6 1296 420 235 232 31 chr15 93314422 93314650 -10180324 - L1MC LINE L1 -2676 3470 3197 6 1296 616 256 28 51 chr15 93314650 93314864 -10180110 + ID_B1 SINE B4 6 214 -10 6 1296 270 314 0 0 chr15 93314919 93314989 -10179985 - B4A SINE B4 -2 290 221 6 1296 235 319 77 0 chr15 93315029 93315120 -10179854 - B3A SINE B2 -100 98 1 6 1296 288 239 15 0 chr15 93315199 93315266 -10179708 - B4 SINE B4 -224 68 1 6 1296 1502 68 16 0 chr15 93315277 93315468 -10179506 - B2_Mm2 SINE B2 0 195 2 6 1296 257 238 123 20 chr15 93315568 93315714 -10179260 - L1MC LINE L1 -3106 3040 2880 6 1296 239 342 0 0 chr15 93315739 93315812 -10179162 + BC1_Mm scRNA scRNA 25 97 -55 6 1296 213 114 65 43 chr15 93316033 93316079 -10178895 + C-rich Low_complexity Low_complexity 5 51 0 6 1296 225 0 0 0 chr15 93316858 93316883 -10178091 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 6 1296 527 199 94 24 chr15 93317002 93317172 -10177802 - B2_Mm2 SINE B2 -9 186 5 6 1296 324 0 0 0 chr15 93317753 93317789 -10177185 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1296 247 228 184 88 chr15 93317821 93317946 -10177028 - RSINE1 SINE B4 0 165 29 6 1296 470 17 0 17 chr15 93318035 93318095 -10176879 + (TCCC)n Simple_repeat Simple_repeat 4 62 0 6 1296 247 275 14 28 chr15 93318108 93318179 -10176795 - B1F SINE Alu -34 115 46 6 1296 1493 48 38 0 chr15 93318288 93318474 -10176500 - B2_Mm2 SINE B2 -2 193 1 6 1296 275 293 8 128 chr15 93318514 93318647 -10176327 + RSINE1 SINE B4 49 165 0 6 1296 455 188 116 33 chr15 93318968 93319089 -10175885 - B1_Mur1 SINE Alu -12 137 7 6 1296 183 80 0 0 chr15 93319208 93319233 -10175741 + (TCTG)n Simple_repeat Simple_repeat 1 25 0 6 1296 1068 35 0 0 chr15 93319985 93320127 -10174847 - B1_Mus1 SINE Alu 0 148 7 6 1296 348 301 20 20 chr15 93320322 93320471 -10174503 + RLTR15 LTR ERVK 186 334 -25 6 1296 490 303 0 0 chr15 93321236 93321368 -10173606 - B1_Mur1 SINE Alu -16 133 2 6 1296 275 224 0 115 chr15 93321415 93321511 -10173463 - PB1 SINE Alu -2 125 41 6 1296 287 257 41 99 chr15 93323009 93323130 -10171844 - MTEb LTR MaLR -250 129 16 6 1297 318 72 354 9 chr15 93323572 93323682 -10171292 - B2_Mm2 SINE B2 0 195 48 6 1297 1147 115 40 0 chr15 93323747 93323921 -10171053 - B2_Mm1t SINE B2 -12 181 1 6 1297 250 145 24 169 chr15 93324388 93324429 -10170545 - B2_Mm1t SINE B2 -121 72 37 6 1297 916 115 28 41 chr15 93324429 93324574 -10170400 - B1_Mus1 SINE Alu -5 143 1 6 1297 253 49 4 29 chr15 93324574 93324615 -10170359 - B3A SINE B2 -157 36 2 6 1297 1519 64 16 0 chr15 93325808 93325996 -10168978 - B2_Mm2 SINE B2 -4 191 1 6 1297 405 230 0 0 chr15 93326384 93326484 -10168490 + (TA)n Simple_repeat Simple_repeat 1 100 0 6 1297 2356 192 78 25 chr15 93327056 93327584 -10167390 + L1_Mur3 LINE L1 5090 5645 -235 6 1297 1267 239 84 15 chr15 93327577 93327912 -10167062 + Lx7 LINE L1 6867 7224 -472 6 1297 293 47 23 0 chr15 93327940 93327983 -10166991 + (TA)n Simple_repeat Simple_repeat 1 44 0 6 1297 180 176 0 0 chr15 93328885 93328919 -10166055 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1297 646 151 21 17 chr15 93332682 93332807 -10162167 - B1_Mus1 SINE Alu -19 130 1 6 1297 1192 99 55 0 chr15 93332867 93333049 -10161925 - B2_Mm1t SINE B2 0 193 2 6 1297 251 266 189 11 chr15 93334325 93334420 -10160554 - PB1D7 SINE Alu -8 112 1 6 1297 1530 52 15 20 chr15 93334517 93334712 -10160262 - B2_Mm2 SINE B2 -1 194 1 6 1297 527 309 107 48 chr15 93334860 93335132 -10159842 - MER82 DNA MER2_type -252 401 114 6 1297 225 0 0 0 chr15 93335855 93335880 -10159094 + (GA)n Simple_repeat Simple_repeat 1 25 0 6 1297 393 22 0 0 chr15 93335880 93335925 -10159049 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1297 261 83 0 0 chr15 93336418 93336454 -10158520 + (T)n Simple_repeat Simple_repeat 1 36 0 6 1297 1135 75 7 0 chr15 93336454 93336601 -10158373 - B1_Mus1 SINE Alu 0 148 1 6 1297 1699 16 0 20 chr15 93336731 93336928 -10158046 - B2_Mm1a SINE B2 0 193 1 6 1297 538 168 17 86 chr15 93336930 93337047 -10157927 - PB1D9 SINE Alu -1 119 11 6 1297 229 253 138 12 chr15 93337679 93337759 -10157215 + ID_B1 SINE B4 117 206 -18 7 1297 2555 83 3 0 chr15 93337978 93338304 -10156670 + ORR1A2 LTR MaLR 1 327 0 7 1297 259 304 41 59 chr15 93338365 93338417 -10156557 - YREP_Mm Unknown Unknown -1452 360 228 7 1297 457 276 29 29 chr15 93338417 93338555 -10156419 + ID_B1 SINE B4 87 224 0 7 1297 259 304 41 59 chr15 93338555 93338585 -10156389 - YREP_Mm Unknown Unknown -1452 227 145 7 1297 259 270 178 71 chr15 93339889 93339917 -10155057 + ID_B1 SINE B4 52 161 -131 7 1297 395 254 0 35 chr15 93339917 93340045 -10154929 + B1_Mur3 SINE Alu 2 120 0 7 1297 259 270 178 71 chr15 93340045 93340064 -10154910 + ID_B1 SINE B4 162 246 -46 7 1297 227 189 19 0 chr15 93340064 93340117 -10154857 + GA-rich Low_complexity Low_complexity 1 54 0 7 1297 774 126 34 22 chr15 93340118 93340219 -10154755 + polypurine Low_complexity Low_complexity 1 103 0 7 1297 1165 56 0 43 chr15 93340219 93340407 -10154567 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 7 1297 774 126 34 22 chr15 93340407 93340483 -10154491 + polypurine Low_complexity Low_complexity 104 179 0 7 1297 379 138 24 24 chr15 93340484 93340566 -10154408 + GA-rich Low_complexity Low_complexity 4 85 0 7 1297 354 284 29 49 chr15 93340879 93341083 -10153891 - RMER17D2 LTR ERVK -376 433 234 7 1297 198 0 0 0 chr15 93341810 93341832 -10153142 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1297 855 80 0 0 chr15 93342008 93342121 -10152853 - B2_Mm2 SINE B2 -81 114 2 7 1297 251 233 0 118 chr15 93342485 93342553 -10152421 + MT2B LTR ERVL 168 227 -374 7 1297 604 184 9 60 chr15 93342492 93342608 -10152366 + PB1D9 SINE Alu 10 119 -1 7 1297 780 206 235 0 chr15 93343949 93344119 -10150855 + B3 SINE B2 1 210 -6 7 1297 26 0 0 0 chr15 93344119 93344145 -10150829 + AT_rich Low_complexity Low_complexity 1 26 0 7 1297 22 0 0 0 chr15 93344884 93344906 -10150068 + AT_rich Low_complexity Low_complexity 1 22 0 7 1297 409 198 0 90 chr15 93345632 93345732 -10149242 + B3 SINE B2 122 212 -4 7 1297 659 189 6 69 chr15 93346108 93346267 -10148707 - B1_Mur2 SINE Alu 0 149 1 7 1297 1495 34 39 0 chr15 93346396 93346575 -10148399 + B2_Mm2 SINE B2 1 186 -9 7 1297 914 178 144 20 chr15 93346801 93347002 -10147972 - URR1A DNA MER1_type 0 226 1 7 1297 180 111 0 0 chr15 93347033 93347060 -10147914 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 7 1297 1218 61 0 0 chr15 93347060 93347207 -10147767 - B1_Mm SINE Alu 0 147 1 7 1297 1360 53 20 46 chr15 93347213 93347410 -10147564 - B2_Mm2 SINE B2 -2 193 2 7 1297 854 173 111 21 chr15 93347847 93348036 -10146938 + B3 SINE B2 1 206 -10 7 1297 275 316 50 50 chr15 93351149 93351269 -10143705 - PB1D7 SINE Alu 0 120 1 7 1297 247 234 0 0 chr15 93351893 93351940 -10143034 + C-rich Low_complexity Low_complexity 2 48 0 7 1297 799 312 10 38 chr15 93352375 93352668 -10142306 + B4A SINE B4 2 286 -6 7 1297 671 181 0 8 chr15 93354951 93355068 -10139906 + B3 SINE B2 1 116 -100 7 1297 1261 34 7 0 chr15 93355104 93355251 -10139723 - B1_Mus1 SINE Alu 0 148 1 7 1297 232 338 0 0 chr15 93355256 93355327 -10139647 + B3 SINE B2 111 181 -35 7 1297 239 114 23 0 chr15 93355352 93355396 -10139578 + (TA)n Simple_repeat Simple_repeat 1 45 0 7 1297 231 36 0 0 chr15 93356272 93356300 -10138674 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1297 1110 69 14 7 chr15 93356300 93356446 -10138528 - B1_Mm SINE Alu 0 147 1 7 1297 1712 26 0 0 chr15 93356492 93356685 -10138289 + B2_Mm1a SINE B2 1 193 0 7 1297 201 121 0 0 chr15 93356686 93356719 -10138255 + (A)n Simple_repeat Simple_repeat 1 33 0 7 1297 358 173 66 13 chr15 93356720 93356796 -10138178 + ID4_ SINE ID 4 83 0 7 1297 219 268 18 0 chr15 93356796 93356816 -10138158 + polypurine Low_complexity Low_complexity 1 20 0 7 1297 1696 26 0 0 chr15 93356816 93357008 -10137966 + B2_Mm1t SINE B2 2 193 0 7 1297 219 268 18 0 chr15 93357008 93357043 -10137931 + polypurine Low_complexity Low_complexity 21 56 0 7 1297 695 179 0 22 chr15 93357043 93357226 -10137748 + GA-rich Low_complexity Low_complexity 1 179 0 7 1297 387 0 0 0 chr15 93357428 93357471 -10137503 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1297 462 36 0 0 chr15 93357491 93357547 -10137427 + (TG)n Simple_repeat Simple_repeat 1 56 0 7 1297 324 0 0 0 chr15 93357547 93357582 -10137392 + (GA)n Simple_repeat Simple_repeat 1 36 0 7 1297 393 326 39 0 chr15 93357583 93357712 -10137262 - B1F SINE Alu -15 134 1 7 1297 354 127 0 0 chr15 93358582 93358653 -10136321 + (TG)n Simple_repeat Simple_repeat 2 72 0 7 1297 216 0 0 0 chr15 93358659 93358683 -10136291 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 1297 1203 75 6 18 chr15 93358758 93358922 -10136052 + B2_Mm2 SINE B2 3 164 -31 7 1297 252 0 0 0 chr15 93358927 93358955 -10136019 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 7 1297 564 252 64 7 chr15 93360046 93360186 -10134788 - B1_Mur1 SINE Alu 0 149 2 7 1297 234 279 29 0 chr15 93361197 93361265 -10133709 - ID SINE ID -154 70 1 7 1297 216 0 0 0 chr15 93361387 93361411 -10133563 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1297 734 319 108 11 chr15 93361483 93361743 -10133231 + B4 SINE B4 8 292 0 7 1297 318 132 0 0 chr15 93361840 93361893 -10133081 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1297 777 221 64 25 chr15 93362400 93362604 -10132370 - B3 SINE B2 -2 214 3 7 1297 353 22 22 0 chr15 93362606 93362652 -10132322 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 1297 579 246 51 0 chr15 93363749 93363867 -10131107 + B1F SINE Alu 25 148 -1 7 1297 351 0 0 0 chr15 93364650 93364689 -10130285 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 1297 228 67 0 0 chr15 93364719 93364749 -10130225 + (CATG)n Simple_repeat Simple_repeat 1 30 0 7 1297 354 244 12 25 chr15 93364865 93364945 -10130029 + PB1 SINE Alu 19 97 -30 7 1297 1717 31 0 0 chr15 93365872 93366065 -10128909 - B2_Mm1t SINE B2 0 193 1 7 1297 24 0 0 0 chr15 93366115 93366139 -10128835 + AT_rich Low_complexity Low_complexity 1 24 0 7 1297 558 108 0 0 chr15 93366191 93366274 -10128700 + (TCCC)n Simple_repeat Simple_repeat 4 86 0 7 1297 852 165 70 27 chr15 93367144 93367200 -10127774 - B2_Mm2 SINE B2 0 195 135 7 1297 750 11 0 0 chr15 93367200 93367287 -10127687 + (CA)n Simple_repeat Simple_repeat 2 88 0 7 1297 852 165 70 27 chr15 93367287 93367417 -10127557 - B2_Mm2 SINE B2 -61 134 2 7 1297 662 140 45 36 chr15 93367445 93367556 -10127418 - B1_Mur2 SINE Alu -37 112 1 7 1297 1211 133 112 15 chr15 93368012 93368218 -10126756 + URR1A DNA MER1_type 1 226 0 7 1297 688 98 67 0 chr15 93368655 93368819 -10126155 + (TG)n Simple_repeat Simple_repeat 1 175 0 7 1297 252 0 0 0 chr15 93369753 93369781 -10125193 + (TA)n Simple_repeat Simple_repeat 2 29 0 7 1297 1021 98 21 7 chr15 93370623 93370767 -10124207 + B1_Mur4 SINE Alu 5 150 0 7 1297 190 109 65 0 chr15 93371268 93371314 -10123660 + A-rich Low_complexity Low_complexity 2 50 0 7 1297 416 299 114 46 chr15 93372259 93372522 -10122452 - B4A SINE B4 -10 282 2 7 1297 216 0 0 0 chr15 93372896 93372920 -10122054 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1297 1127 55 0 20 chr15 93372920 93373061 -10121913 - B1_Mus1 SINE Alu -8 140 2 7 1297 1396 62 0 11 chr15 93373285 93373463 -10121511 - B2_Mm2 SINE B2 -16 179 4 7 1297 21 0 0 0 chr15 93373606 93373627 -10121347 + AT_rich Low_complexity Low_complexity 1 21 0 7 1297 971 234 9 5 chr15 93374082 93374297 -10120677 - B3 SINE B2 0 216 1 7 1297 563 288 7 33 chr15 93374626 93374777 -10120197 + RSINE1 SINE B4 15 161 -4 7 1297 352 199 22 22 chr15 93375201 93375381 -10119593 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 1297 412 220 16 8 chr15 93375397 93375650 -10119324 + (CA)n Simple_repeat Simple_repeat 1 255 0 7 1297 1009 193 49 15 chr15 93376181 93376386 -10118588 - B3 SINE B2 -4 212 1 7 1297 554 108 36 73 chr15 93376501 93376611 -10118363 - B1_Mus2 SINE Alu -1 146 41 7 1297 223 374 0 45 chr15 93377181 93377360 -10117614 + (CATA)n Simple_repeat Simple_repeat 2 172 0 7 1297 221 0 0 33 chr15 93377615 93377645 -10117329 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 7 1297 1251 75 0 0 chr15 93377645 93377804 -10117170 - B2_Mm2 SINE B2 -35 160 2 7 1297 180 0 0 0 chr15 93378504 93378524 -10116450 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7 1297 320 362 57 0 chr15 93379292 93379433 -10115541 + B1F1 SINE Alu 1 149 0 7 1297 695 279 7 0 chr15 93379576 93379730 -10115244 - B3 SINE B2 -19 197 43 7 1297 1100 130 39 6 chr15 93379741 93379919 -10115055 - B2_Mm2 SINE B2 -11 184 1 7 1297 22 0 0 0 chr15 93379973 93379995 -10114979 + AT_rich Low_complexity Low_complexity 1 22 0 7 1297 23 0 0 0 chr15 93380597 93380620 -10114354 + AT_rich Low_complexity Low_complexity 1 23 0 7 1297 256 179 63 0 chr15 93381540 93381635 -10113339 + (TA)n Simple_repeat Simple_repeat 2 102 0 7 1297 969 162 0 0 chr15 93381637 93381810 -10113164 + (CA)n Simple_repeat Simple_repeat 2 174 0 7 1297 362 197 53 0 chr15 93381823 93381899 -10113075 - PB1D9 SINE Alu -26 94 15 7 1297 325 250 121 33 chr15 93382118 93382209 -10112765 + PB1D10 SINE Alu 1 99 -18 7 1297 248 189 37 19 chr15 93383432 93383486 -10111488 - RSINE1 SINE B4 -61 104 50 7 1297 481 152 29 7 chr15 93383558 93383697 -10111277 + (CA)n Simple_repeat Simple_repeat 2 143 0 7 1297 232 170 47 0 chr15 93383728 93383834 -10111140 + (CA)n Simple_repeat Simple_repeat 2 112 0 7 1297 411 158 36 18 chr15 93383851 93384019 -10110955 + (CA)n Simple_repeat Simple_repeat 1 171 0 7 1297 21 0 0 0 chr15 93384021 93384042 -10110932 + AT_rich Low_complexity Low_complexity 1 21 0 7 1297 225 169 56 14 chr15 93384568 93384640 -10110334 + GA-rich Low_complexity Low_complexity 2 76 0 7 1297 312 27 0 0 chr15 93385393 93385430 -10109544 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 8 1297 414 0 0 0 chr15 93385430 93385475 -10109499 + (TG)n Simple_repeat Simple_repeat 1 46 0 8 1297 368 214 0 0 chr15 93385640 93385710 -10109264 + MTD LTR MaLR 1 70 -349 8 1297 1182 249 99 19 chr15 93385770 93386093 -10108881 + MTD LTR MaLR 71 419 0 8 1297 205 89 22 22 chr15 93387127 93387173 -10107801 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 8 1297 551 40 0 13 chr15 93387317 93387392 -10107582 + (GA)n Simple_repeat Simple_repeat 1 74 0 8 1297 374 134 15 0 chr15 93387392 93387459 -10107515 + (GGA)n Simple_repeat Simple_repeat 3 70 0 8 1297 200 304 173 16 chr15 93387512 93387639 -10107335 + MIR SINE MIR 14 160 -102 8 1297 621 152 144 0 chr15 93387742 93387867 -10107107 - B1_Mus2 SINE Alu 0 147 5 8 1297 523 221 0 34 chr15 93388008 93388126 -10106848 + B1_Mur1 SINE Alu 5 118 -31 8 1297 296 0 51 0 chr15 93388126 93388165 -10106809 + (CAAT)n Simple_repeat Simple_repeat 4 44 0 8 1297 510 242 0 53 chr15 93388165 93388177 -10106797 + B1_Mur3 SINE Alu 119 128 -21 8 1297 782 150 28 7 chr15 93388476 93388617 -10106357 + B1_Mus1 SINE Alu 5 148 0 8 1297 230 257 0 79 chr15 93389133 93389209 -10105765 - PB1D7 SINE Alu -37 83 14 8 1297 529 323 50 82 chr15 93389474 93389754 -10105220 + MLT1A0 LTR MaLR 95 365 0 8 1297 195 42 0 0 chr15 93390345 93390369 -10104605 + (TGGGGG)n Simple_repeat Simple_repeat 2 25 0 8 1297 28 0 0 0 chr15 93391268 93391296 -10103678 + AT_rich Low_complexity Low_complexity 1 28 0 8 1297 246 62 0 0 chr15 93391503 93391535 -10103439 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 8 1297 312 247 37 0 chr15 93393167 93393248 -10101726 - B1_Mm SINE Alu 0 147 64 8 1297 402 228 65 11 chr15 93393217 93393310 -10101664 - B1F1 SINE Alu -23 126 29 8 1297 22 0 0 0 chr15 93393756 93393778 -10101196 + AT_rich Low_complexity Low_complexity 1 22 0 8 1297 606 269 67 92 chr15 93395124 93395288 -10099686 - B3 SINE B2 -7 186 27 8 1297 871 156 52 58 chr15 93395284 93395475 -10099499 - B2_Mm2 SINE B2 -4 191 2 8 1297 432 277 106 20 chr15 93395722 93395873 -10099101 - RSINE1 SINE B4 0 165 2 8 1297 378 0 0 0 chr15 93396070 93396112 -10098862 + (CAA)n Simple_repeat Simple_repeat 3 44 0 8 1297 384 263 28 164 chr15 93396414 93396628 -10098346 - 7SK RNA RNA -144 187 3 8 1297 573 189 63 0 chr15 93396635 93396746 -10098228 - B1_Mur2 SINE Alu -21 128 11 8 1297 387 0 0 0 chr15 93398732 93398775 -10096199 + (TC)n Simple_repeat Simple_repeat 2 44 0 8 1297 245 51 26 0 chr15 93400102 93400141 -10094833 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 8 1297 788 207 37 31 chr15 93400605 93400785 -10094189 - B3 SINE B2 -5 188 1 8 1297 213 121 0 0 chr15 93402460 93402493 -10092481 + (TCCA)n Simple_repeat Simple_repeat 4 36 0 8 1297 513 223 10 10 chr15 93402619 93402723 -10092251 + PB1D9 SINE Alu 10 113 -7 8 1297 193 29 29 29 chr15 93402725 93402760 -10092214 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 1297 1141 157 46 0 chr15 93402766 93402963 -10092011 + B3 SINE B2 1 206 -10 8 1297 1338 99 0 20 chr15 93403056 93403252 -10091722 + B2_Mm2 SINE B2 3 194 -1 8 1297 772 179 0 36 chr15 93403919 93404058 -10090916 - B1_Mur1 SINE Alu -6 143 10 8 1297 200 143 24 0 chr15 93404536 93404578 -10090396 + (TGG)n Simple_repeat Simple_repeat 2 44 0 8 1297 920 121 0 0 chr15 93404578 93404710 -10090264 + B1_Mus2 SINE Alu 9 140 -7 8 1297 222 37 0 0 chr15 93404799 93404826 -10090148 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 8 1297 1141 58 0 0 chr15 93404826 93404964 -10090010 - B1_Mus1 SINE Alu -10 138 1 8 1297 484 232 6 6 chr15 93405252 93405430 -10089544 + (TG)n Simple_repeat Simple_repeat 1 178 0 8 1297 248 279 8 0 chr15 93405443 93405565 -10089409 + (TG)n Simple_repeat Simple_repeat 1 123 0 8 1297 724 252 55 65 chr15 93405585 93405878 -10089096 - B4 SINE B4 0 292 3 8 1297 361 277 88 18 chr15 93405887 93406001 -10088973 - ID_B1 SINE B4 -20 204 83 8 1297 235 274 16 31 chr15 93406943 93407007 -10087967 + AmnSINE1 SINE SINE 147 209 -366 8 1297 1191 94 5 53 chr15 93407530 93407720 -10087254 - B2_Mm2 SINE B2 -14 181 1 8 1297 968 131 0 20 chr15 93408896 93409044 -10085930 + B1_Mur1 SINE Alu 5 149 0 8 1297 370 213 12 33 chr15 93409116 93409226 -10085748 + BC1_Mm scRNA scRNA 5 111 -41 8 1297 51 0 0 0 chr15 93409456 93409507 -10085467 + AT_rich Low_complexity Low_complexity 1 51 0 8 1297 305 276 201 0 chr15 93410244 93410378 -10084596 - MER53 DNA hAT 0 193 33 8 1297 830 139 14 35 chr15 93410972 93411114 -10083860 + B1_Mur1 SINE Alu 3 141 -8 8 1297 804 146 12 0 chr15 93413050 93413189 -10081785 - B1_Mur3 SINE Alu 0 150 1 8 1297 21 0 0 0 chr15 93413991 93414012 -10080962 + AT_rich Low_complexity Low_complexity 1 21 0 8 1297 455 206 43 0 chr15 93414486 93414578 -10080396 + B1_Mus1 SINE Alu 33 128 -20 8 1297 1436 48 32 5 chr15 93414680 93414868 -10080106 - B2_Mm1t SINE B2 0 193 1 8 1297 900 182 0 0 chr15 93415646 93415794 -10079180 + B1_Mur4 SINE Alu 3 150 0 8 1297 570 54 0 0 chr15 93415802 93415876 -10079098 + (GGA)n Simple_repeat Simple_repeat 3 76 0 8 1297 486 46 0 0 chr15 93415876 93415941 -10079033 + (CAG)n Simple_repeat Simple_repeat 1 65 0 8 1297 1100 75 0 39 chr15 93416023 93416176 -10078798 - B1_Mus1 SINE Alu 0 148 2 8 1297 1359 134 9 39 chr15 93416654 93416886 -10078088 - URR1A DNA MER1_type 0 226 2 8 1297 491 312 38 38 chr15 93416887 93417047 -10077927 + B3 SINE B2 3 162 -54 8 1297 21 36 0 0 chr15 93417071 93417099 -10077875 + AT_rich Low_complexity Low_complexity 1 28 0 8 1297 1189 80 101 11 chr15 93417350 93417528 -10077446 - B2_Mm2 SINE B2 0 195 2 8 1297 234 338 0 39 chr15 93418309 93418386 -10076588 + ID4_ SINE ID 2 75 -8 8 1297 246 283 164 16 chr15 93418440 93418562 -10076412 - MIR3 SINE MIR -45 217 78 8 1297 408 158 0 0 chr15 93419850 93419926 -10075048 + (TA)n Simple_repeat Simple_repeat 1 76 0 8 1297 336 48 0 0 chr15 93419926 93419968 -10075006 + (TG)n Simple_repeat Simple_repeat 1 42 0 8 1297 242 147 15 0 chr15 93419972 93420040 -10074934 + (TCTG)n Simple_repeat Simple_repeat 4 72 0 8 1297 456 72 0 0 chr15 93420979 93421048 -10073926 + (TC)n Simple_repeat Simple_repeat 2 70 0 8 1297 890 246 36 88 chr15 93423090 93423398 -10071576 - B4A SINE B4 0 292 1 8 1297 22 0 0 0 chr15 93423974 93423996 -10070978 + AT_rich Low_complexity Low_complexity 1 22 0 8 1297 465 19 0 0 chr15 93425251 93425305 -10069669 + (T)n Simple_repeat Simple_repeat 1 54 0 8 1297 189 0 0 0 chr15 93427042 93427063 -10067911 + (GGCTG)n Simple_repeat Simple_repeat 1 21 0 8 1297 253 208 0 20 chr15 93428567 93428616 -10066358 - ID2 SINE ID -3 80 33 8 1297 303 264 115 0 chr15 93428642 93428729 -10066245 - PB1 SINE Alu -29 98 2 8 1297 804 249 6 33 chr15 93428769 93428990 -10065984 + B3A SINE B2 2 214 -2 8 1297 552 257 29 0 chr15 93429196 93429336 -10065638 + MLT1B LTR MaLR 18 161 -229 8 1297 503 235 10 10 chr15 93429342 93429445 -10065529 - ID_B1 SINE B4 -1 223 121 8 1297 329 353 7 0 chr15 93429600 93429736 -10065238 + MLT1B LTR MaLR 328 464 -3 8 1297 210 234 21 21 chr15 93430268 93430316 -10064658 - B4A SINE B4 -243 49 2 8 1297 641 264 21 0 chr15 93430399 93430539 -10064435 - B1_Mm SINE Alu -2 145 3 8 1297 308 351 88 72 chr15 93430539 93430580 -10064394 - B4 SINE B4 -69 223 40 8 1297 411 319 9 0 chr15 93433019 93433132 -10061842 - ID_B1 SINE B4 -2 222 109 8 1297 278 281 94 47 chr15 93433025 93433152 -10061822 - B1F2 SINE Alu -8 141 9 8 1297 213 231 0 37 chr15 93433639 93433693 -10061281 + MIR3 SINE MIR 14 65 -143 8 1297 1180 61 0 20 chr15 93434694 93434844 -10060130 + B1_Mus1 SINE Alu 2 148 0 8 1297 276 368 112 28 chr15 93435385 93435564 -10059410 - L4 LINE RTE -1268 761 568 8 1297 739 72 9 9 chr15 93435920 93436032 -10058942 + (TTCC)n Simple_repeat Simple_repeat 2 113 0 8 1297 252 0 0 0 chr15 93436142 93436170 -10058804 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 8 1297 1427 75 27 0 chr15 93437181 93437368 -10057606 - B2_Mm1a SINE B2 0 193 2 8 1297 977 73 66 0 chr15 93437386 93437522 -10057452 - B1_Mm SINE Alu 0 147 3 8 1297 285 29 0 0 chr15 93437579 93437613 -10057361 + (TC)n Simple_repeat Simple_repeat 2 35 0 8 1297 1300 111 39 0 chr15 93437614 93437795 -10057179 - B2_Mm2 SINE B2 -4 191 4 8 1297 252 0 0 0 chr15 93437855 93437883 -10057091 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 1297 231 258 63 16 chr15 93437897 93437960 -10057014 - B3A SINE B2 -48 150 85 8 1297 1097 84 0 6 chr15 93438014 93438182 -10056792 + (CA)n Simple_repeat Simple_repeat 1 167 0 8 1297 324 329 7 40 chr15 93438310 93438459 -10056515 - B4A SINE B4 -86 138 2 8 1297 2566 60 3 0 chr15 93438904 93439222 -10055752 - ORR1A2 LTR MaLR -8 319 1 8 1297 2009 119 8 116 chr15 93439362 93439724 -10055250 - ORR1A3 LTR MaLR -1 325 3 8 1297 225 0 0 0 chr15 93440280 93440305 -10054669 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1297 31 68 0 0 chr15 93441831 93441890 -10053084 + AT_rich Low_complexity Low_complexity 1 59 0 8 1297 200 34 0 33 chr15 93442060 93442090 -10052884 + (CCCCCT)n Simple_repeat Simple_repeat 4 32 0 8 1297 426 311 17 62 chr15 93442798 93442976 -10051998 - ID_B1 SINE B4 -8 216 47 8 1297 894 131 0 0 chr15 93443575 93443705 -10051269 - B3 SINE B2 -86 130 1 8 1297 481 141 10 10 chr15 93444274 93444374 -10050600 + GA-rich Low_complexity Low_complexity 3 102 0 9 1297 462 36 0 0 chr15 93444446 93444502 -10050472 + (TG)n Simple_repeat Simple_repeat 1 56 0 9 1297 260 91 23 0 chr15 93444629 93444673 -10050301 + (TGGGGG)n Simple_repeat Simple_repeat 3 47 0 9 1297 251 294 0 0 chr15 93444977 93445045 -10049929 + MIR3 SINE MIR 92 159 -49 9 1297 184 243 0 0 chr15 93445298 93445335 -10049639 - L2b LINE L2 -14 3361 3325 9 1297 2111 168 85 3 chr15 93445414 93445801 -10049173 - MTC LTR MaLR 0 421 3 9 1297 316 264 48 32 chr15 93446058 93446183 -10048791 - ID_B1 SINE B4 -7 217 91 9 1297 7582 116 15 3 chr15 93447026 93448161 -10046813 + L1_Mm LINE L1 4186 5333 -550 9 1297 521 30 15 0 chr15 93449906 93449973 -10045001 + (TC)n Simple_repeat Simple_repeat 1 68 0 9 1297 22 35 0 0 chr15 93450006 93450035 -10044939 + AT_rich Low_complexity Low_complexity 1 29 0 9 1297 936 148 8 114 chr15 93450136 93450373 -10044601 + Lx3B LINE L1 6755 6966 -7 9 1297 315 0 0 0 chr15 93450382 93450417 -10044557 + (CAA)n Simple_repeat Simple_repeat 2 36 0 9 1297 279 0 0 0 chr15 93450504 93450535 -10044439 + (TA)n Simple_repeat Simple_repeat 1 31 0 9 1297 234 0 0 0 chr15 93450611 93450637 -10044337 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 9 1297 631 314 24 32 chr15 93450925 93451172 -10043802 + Lx8 LINE L1 6149 6393 -1080 9 1297 758 140 106 19 chr15 93451173 93451333 -10043641 - ORR1D1 LTR MaLR -3 371 198 9 1297 377 287 8 17 chr15 93451927 93452044 -10042930 - L2a LINE L2 -4 3422 3307 9 162 398 318 90 0 chr15 93454185 93454374 -10040600 + MER63D DNA AcHobo 16 221 -840 9 1298 2017 229 161 22 chr15 93454412 93454953 -10040021 + Lx6 LINE L1 6823 7438 -22 9 1298 5277 200 169 37 chr15 93455072 93455427 -10039547 + L1_Mur3 LINE L1 2649 3000 -2880 9 1298 878 207 207 0 chr15 93455427 93455606 -10039368 + B3 SINE B2 1 216 0 9 1298 5277 200 169 37 chr15 93455606 93456524 -10038450 + L1_Mur3 LINE L1 3001 3951 -1929 9 1298 1248 41 0 0 chr15 93456524 93456669 -10038305 + B1_Mm SINE Alu 1 145 -2 9 1298 5277 200 169 37 chr15 93456669 93457220 -10037754 + L1_Mur3 LINE L1 3952 4715 -1165 9 1298 701 263 38 55 chr15 93457755 93457992 -10036982 + B4A SINE B4 34 266 -26 9 1298 180 0 0 0 chr15 93458121 93458141 -10036833 + (CG)n Simple_repeat Simple_repeat 2 21 0 9 1298 486 0 0 0 chr15 93458141 93458194 -10036780 + (CA)n Simple_repeat Simple_repeat 1 54 0 9 1298 411 266 65 0 chr15 93459732 93459856 -10035118 + Tigger7 DNA MER2_type 176 307 -2184 9 1298 537 291 116 31 chr15 93459862 93460181 -10034793 + Tigger7 DNA MER2_type 2137 2482 -9 9 1298 22 0 0 0 chr15 93461412 93461434 -10033540 + AT_rich Low_complexity Low_complexity 1 22 0 9 1298 288 0 0 0 chr15 93461667 93461699 -10033275 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 1298 230 322 147 58 chr15 93461861 93462052 -10032922 - MIRc SINE MIR -1 267 60 9 1298 360 176 15 38 chr15 93465463 93465600 -10029374 + (TA)n Simple_repeat Simple_repeat 1 133 0 9 1298 297 336 22 15 chr15 93465945 93466081 -10028893 + L3 LINE CR1 3995 4131 -358 9 1298 333 282 15 88 chr15 93466233 93466369 -10028605 - MER117 DNA MER1_type -31 166 41 9 1298 237 197 0 0 chr15 93466802 93466863 -10028111 + GA-rich Low_complexity Low_complexity 2 62 0 9 1298 237 155 52 0 chr15 93466864 93466922 -10028052 + (CAGAGA)n Simple_repeat Simple_repeat 6 66 0 9 1298 578 105 9 0 chr15 93466946 93467051 -10027923 + (GA)n Simple_repeat Simple_repeat 2 107 0 9 1298 241 308 97 66 chr15 93467219 93467476 -10027498 + L3 LINE CR1 4167 4431 -58 9 1298 654 192 23 35 chr15 93467825 93467998 -10026976 + Lx9 LINE L1 7468 7638 -6 9 1298 24 0 0 0 chr15 93468044 93468068 -10026906 + AT_rich Low_complexity Low_complexity 1 24 0 9 1298 291 71 0 0 chr15 93468865 93468907 -10026067 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 9 1298 390 295 210 77 chr15 93469449 93469721 -10025253 - MLT1D LTR MaLR 0 505 192 9 1298 2987 109 12 5 chr15 93469721 93470152 -10024822 + RLTR10C LTR ERVK 1 434 -2 9 1298 390 295 210 77 chr15 93470152 93470217 -10024757 - MLT1D LTR MaLR -314 191 124 9 1298 1008 91 7 47 chr15 93470987 93471137 -10023837 + B1_Mus1 SINE Alu 3 146 -2 9 1298 575 143 0 19 chr15 93471137 93471244 -10023730 + (CAA)n Simple_repeat Simple_repeat 1 105 0 9 1298 1724 132 65 65 chr15 93471424 93471749 -10023225 + ORR1A4 LTR MaLR 5 329 0 9 1298 356 38 0 36 chr15 93472733 93472788 -10022186 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 9 1298 255 287 68 25 chr15 93475499 93475617 -10019357 - L1MA7 LINE L1 -24 6267 6145 9 1298 198 0 0 0 chr15 93475641 93475663 -10019311 + (TG)n Simple_repeat Simple_repeat 2 23 0 9 1298 360 0 0 0 chr15 93477092 93477132 -10017842 + (GAGAA)n Simple_repeat Simple_repeat 5 44 0 9 1298 568 265 137 20 chr15 93477777 93478050 -10016924 - L1ME2 LINE L1 -2078 5964 5652 9 1298 288 0 0 0 chr15 93478118 93478150 -10016824 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 9 1298 348 24 0 0 chr15 93479538 93479579 -10015395 + (TC)n Simple_repeat Simple_repeat 2 42 0 9 1298 1946 256 32 107 chr15 93479580 93479933 -10015041 - Lx8 LINE L1 -7 7466 7151 9 1298 639 153 176 8 chr15 93479933 93480052 -10014922 - B1_Mur4 SINE Alu -11 139 1 9 1298 1946 256 32 107 chr15 93480052 93480490 -10014484 - Lx8 LINE L1 -323 7150 6735 9 1298 338 212 82 0 chr15 93480524 93480609 -10014365 - L2a LINE L2 -2 3424 3333 9 1298 195 129 0 0 chr15 93480633 93480664 -10014310 + (TCC)n Simple_repeat Simple_repeat 3 33 0 9 1298 1186 264 12 22 chr15 93480666 93480987 -10013987 - Lx6 LINE L1 -44 7416 7099 9 1298 252 0 0 0 chr15 93482133 93482161 -10012813 + (CAA)n Simple_repeat Simple_repeat 3 30 0 9 1298 373 309 75 83 chr15 93483251 93483558 -10011416 - RLTR25A LTR ERVK -716 312 8 9 1298 492 119 84 0 chr15 93483564 93483667 -10011307 + RMER1B Other Other 971 1066 0 9 1298 923 164 0 0 chr15 93484411 93484570 -10010404 - ORR1B1 LTR MaLR -231 163 5 9 1298 705 152 22 22 chr15 93484851 93484986 -10009988 - MTC LTR MaLR -5 416 282 9 1298 603 294 54 140 chr15 93484964 93485427 -10009547 + RLTR23 LTR ERV1 8 430 0 9 1298 833 78 0 0 chr15 93485429 93485544 -10009430 - MTC LTR MaLR -107 314 200 9 1298 628 223 0 11 chr15 93486016 93486193 -10008781 + (TG)n Simple_repeat Simple_repeat 1 175 0 9 1298 661 130 0 31 chr15 93487941 93488051 -10006923 + CT-rich Low_complexity Low_complexity 17 124 0 9 1298 1104 50 28 0 chr15 93488051 93488192 -10006782 - B1_Mus2 SINE Alu 0 147 3 9 1298 661 130 0 31 chr15 93488192 93488208 -10006766 + polypyrimidine Low_complexity Low_complexity 2 16 0 9 1298 27 0 0 0 chr15 93488540 93488567 -10006407 + AT_rich Low_complexity Low_complexity 1 27 0 9 1298 999 148 196 0 chr15 93488860 93489049 -10005925 - URR1A DNA MER1_type 0 226 1 9 1298 22 0 0 0 chr15 93489703 93489725 -10005249 + AT_rich Low_complexity Low_complexity 1 22 0 9 1298 465 294 60 66 chr15 93489745 93489927 -10005047 - B3A SINE B2 -16 182 2 9 1298 3355 169 138 77 chr15 93490006 93490856 -10004118 + RMER19B LTR ERVK 1 902 0 9 1298 1393 271 3 28 chr15 93490856 93491217 -10003757 + Lx6 LINE L1 7083 7434 -26 9 1298 248 49 49 0 chr15 93492263 93492304 -10002670 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 9 1298 353 284 82 9 chr15 93492308 93492418 -10002556 - RSINE1 SINE B4 -2 163 46 9 1298 1547 142 54 122 chr15 93492430 93492783 -10002191 + ORR1A4 LTR MaLR 1 329 0 9 1298 232 364 0 0 chr15 93493564 93493641 -10001333 - ID4 SINE ID -2 81 5 9 1298 472 241 98 0 chr15 93493654 93493766 -10001208 - PB1 SINE Alu -4 123 1 9 1298 237 77 37 37 chr15 93494101 93494155 -10000819 + (TTTG)n Simple_repeat Simple_repeat 1 54 0 9 1298 460 299 57 6 chr15 93494545 93494720 -10000254 + MLT1F-int LTR MaLR 125 308 -1181 9 1298 456 336 61 35 chr15 93495367 93495734 -9999240 + MLT1F-int LTR MaLR 1028 1479 -10 9 1298 487 204 23 17 chr15 93495955 93496130 -9998844 + (TG)n Simple_repeat Simple_repeat 2 177 0 9 1298 515 186 17 39 chr15 93496105 93496284 -9998690 + (TATG)n Simple_repeat Simple_repeat 4 178 0 9 1298 512 218 19 10 chr15 93496284 93496596 -9998378 + (TG)n Simple_repeat Simple_repeat 1 314 0 9 1298 212 312 71 20 chr15 93496894 93496992 -9997982 - MIRc SINE MIR -112 156 54 9 1298 1330 149 18 0 chr15 93497331 93497552 -9997422 - URR1A DNA MER1_type -1 225 1 9 1298 396 0 0 0 chr15 93498009 93498053 -9996921 + (GA)n Simple_repeat Simple_repeat 1 44 0 9 1298 836 187 6 6 chr15 93498050 93498399 -9996575 + GA-rich Low_complexity Low_complexity 1 349 0 9 1298 247 299 0 0 chr15 93498512 93498579 -9996395 + CT-rich Low_complexity Low_complexity 1 67 0 9 1298 447 346 0 0 chr15 93498950 93499077 -9995897 - ID_B1 SINE B4 -14 210 84 9 1298 834 146 124 87 chr15 93500204 93500422 -9994552 + URR1A DNA MER1_type 1 226 0 1 1298 372 324 126 70 chr15 93501641 93501983 -9992991 + MLT1G3 LTR MaLR 218 578 -17 2 1298 966 144 0 0 chr15 93502382 93502562 -9992412 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1298 747 161 0 0 chr15 93502578 93502758 -9992216 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1298 251 312 13 0 chr15 93502877 93502954 -9992020 + CT-rich Low_complexity Low_complexity 1 78 0 4 1298 181 336 108 9 chr15 93503665 93503776 -9991198 - MIRb SINE MIR -18 250 129 5 1298 318 26 0 0 chr15 93504051 93504090 -9990884 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 1298 624 294 73 52 chr15 93505542 93505872 -9989102 - MLT1E1A LTR MaLR 0 680 344 7 1298 501 274 98 15 chr15 93505896 93506100 -9988874 - MLT1E1A LTR MaLR -424 229 9 7 1298 183 264 13 40 chr15 93506562 93506637 -9988337 + MIRc SINE MIR 134 206 -62 8 1298 206 336 70 9 chr15 93506725 93506839 -9988135 - L2b LINE L2 -17 3358 3238 9 1298 244 323 16 22 chr15 93507031 93507177 -9987797 - MIR SINE MIR -93 169 33 1 1298 366 23 0 0 chr15 93507772 93507815 -9987159 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1298 1200 215 138 20 chr15 93508038 93508385 -9986589 + MTD LTR MaLR 18 405 -14 1 1298 207 0 0 0 chr15 93508599 93508622 -9986352 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1 1298 21 0 0 0 chr15 93511200 93511221 -9983753 + AT_rich Low_complexity Low_complexity 1 21 0 1 1298 374 274 62 56 chr15 93511658 93511968 -9983006 + ORR1E LTR MaLR 75 359 -11 1 1298 447 106 0 0 chr15 93512537 93512603 -9982371 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 1298 192 97 0 0 chr15 93513711 93513742 -9981232 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1298 456 261 14 56 chr15 93513743 93513885 -9981089 - RSINE1 SINE B4 -24 141 6 1 1298 1923 192 48 5 chr15 93514633 93515030 -9979944 + MTD LTR MaLR 6 419 0 1 1298 360 327 46 36 chr15 93515083 93515302 -9979672 - MLT1A0 LTR MaLR -143 222 2 2 1298 198 0 0 0 chr15 93516300 93516322 -9978652 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2 1298 2254 145 10 55 chr15 93517453 93517870 -9977104 - RMER10B LTR ERVL 0 398 1 2 1298 184 100 0 0 chr15 93519667 93519697 -9975277 + L2 LINE L2 3029 3058 -361 2 1298 213 284 13 39 chr15 93519849 93519926 -9975048 + L2a LINE L2 3279 3353 -73 2 1298 191 363 85 32 chr15 93520422 93520610 -9974364 + MIRb SINE MIR 65 262 -6 2 1298 432 0 0 0 chr15 93521074 93521122 -9973852 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1298 24 0 0 0 chr15 93521552 93521576 -9973398 + AT_rich Low_complexity Low_complexity 1 24 0 2 1298 19800 5 0 0 chr15 93522047 93524931 -9970043 - L1Md_A LINE L1 0 6582 3699 2 1298 183 290 32 0 chr15 93526547 93526609 -9968365 - MIRc SINE MIR -131 137 74 2 1298 755 315 76 51 chr15 93533283 93533463 -9961511 + L1MB1 LINE L1 5532 5705 -463 3 1298 194 0 0 37 chr15 93533463 93533490 -9961484 + (TTA)n Simple_repeat Simple_repeat 2 27 0 3 1298 4341 75 82 0 chr15 93533491 93534079 -9960895 - L1_Mus3 LINE L1 -16 6622 5987 3 1298 755 315 76 51 chr15 93534079 93534518 -9960456 + L1MB1 LINE L1 5706 6168 0 3 1298 521 258 113 21 chr15 93535380 93535574 -9959400 - B4A SINE B4 -80 212 1 3 1298 247 372 85 32 chr15 93536097 93536286 -9958688 + Tigger12c DNA MER2_type 25 223 -511 3 1298 208 250 0 0 chr15 93536797 93536849 -9958125 + MIR SINE MIR 91 142 -66 3 1298 32 0 0 0 chr15 93538437 93538469 -9956505 + AT_rich Low_complexity Low_complexity 1 32 0 3 1298 327 153 12 100 chr15 93539172 93539252 -9955722 + Lx7 LINE L1 7040 7112 -584 3 1298 406 323 96 15 chr15 93540348 93540546 -9954428 + MER47B DNA MER2_type 47 260 -158 3 1298 180 0 0 0 chr15 93541766 93541786 -9953188 + (GA)n Simple_repeat Simple_repeat 2 21 0 3 1298 190 223 117 18 chr15 93543151 93543218 -9951756 + MIR3 SINE MIR 8 80 -196 4 1298 406 112 70 22 chr15 93544892 93545171 -9949803 + (CA)n Simple_repeat Simple_repeat 1 292 0 4 1298 384 172 34 17 chr15 93545211 93545388 -9949586 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1298 327 339 62 0 chr15 93546063 93546288 -9948686 - MLT1G3 LTR MaLR -16 563 229 4 1298 396 130 0 0 chr15 93546289 93546358 -9948616 + (AGGGGG)n Simple_repeat Simple_repeat 5 73 0 4 1298 254 378 56 7 chr15 93546373 93546517 -9948457 - MLT1G3 LTR MaLR -398 193 43 4 1298 432 37 0 0 chr15 93546643 93546697 -9948277 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 1298 345 250 115 26 chr15 93546716 93546872 -9948102 - B4A SINE B4 -16 276 107 4 1298 819 122 0 0 chr15 93548434 93548565 -9946409 + (TG)n Simple_repeat Simple_repeat 2 132 0 4 1298 721 274 75 0 chr15 93550145 93550346 -9944628 + B3 SINE B2 1 216 0 4 1298 317 97 66 28 chr15 93550461 93550567 -9944407 + CT-rich Low_complexity Low_complexity 2 111 0 4 1298 259 333 53 40 chr15 93550618 93550768 -9944206 - MIRb SINE MIR -47 221 70 4 1298 356 190 194 14 chr15 93551227 93551366 -9943608 + RCHARR1 DNA MER1_type 318 481 -493 5 1298 1428 287 42 32 chr15 93551384 93551953 -9943021 - Lx9 LINE L1 -18 7626 7052 5 1298 5567 182 52 26 chr15 93551966 93553190 -9941784 + L1_Mur3 LINE L1 1617 2871 -3009 5 1298 4031 173 40 34 chr15 93553204 93554030 -9940944 + L1_Mur3 LINE L1 4881 5711 -169 5 1298 1964 108 68 62 chr15 93554031 93554356 -9940618 + ORR1A2 LTR MaLR 1 327 0 5 1298 4187 208 117 48 chr15 93554364 93555453 -9939521 + Lx7 LINE L1 6510 7673 -23 5 1298 369 308 139 6 chr15 93556771 93556944 -9938030 - MLT1D LTR MaLR -50 455 260 5 1298 230 356 17 8 chr15 93557006 93557125 -9937849 - MLT1D LTR MaLR -378 127 8 5 1298 24 53 0 0 chr15 93557231 93557269 -9937705 + AT_rich Low_complexity Low_complexity 1 38 0 5 1298 857 260 8 83 chr15 93557307 93557559 -9937415 + B4A SINE B4 2 234 -58 5 1298 1218 61 0 0 chr15 93557911 93558058 -9936916 - B1_Mus2 SINE Alu 0 147 1 5 1298 934 169 26 31 chr15 93558318 93558513 -9936461 - URR1A DNA MER1_type 0 226 33 5 1298 289 286 104 28 chr15 93560146 93560290 -9934684 + MER20 DNA MER1_type 3 157 -62 6 1298 1190 164 5 27 chr15 93560723 93560942 -9934032 - URR1B DNA MER1_type 0 225 12 6 1298 702 282 25 47 chr15 93560942 93561217 -9933757 - L1M2 LINE L1 -1150 4993 4725 6 1298 24 32 0 0 chr15 93562231 93562262 -9932712 + AT_rich Low_complexity Low_complexity 1 31 0 6 1298 231 114 0 0 chr15 93562313 93562348 -9932626 + (A)n Simple_repeat Simple_repeat 1 35 0 6 1298 301 284 115 25 chr15 93562641 93562808 -9932166 - MIR SINE MIR -65 203 29 6 1298 618 14 0 0 chr15 93563602 93563673 -9931301 + (TG)n Simple_repeat Simple_repeat 1 71 0 6 1298 189 0 0 0 chr15 93564141 93564162 -9930812 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 6 1298 582 24 24 12 chr15 93565587 93565672 -9929302 + (TCTA)n Simple_repeat Simple_repeat 3 88 0 6 1298 2117 122 21 54 chr15 93566510 93566934 -9928040 - RMER17C LTR ERVK 0 410 1 6 1298 267 31 0 0 chr15 93567257 93567289 -9927685 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 1298 415 127 41 25 chr15 93567289 93567410 -9927564 + (TA)n Simple_repeat Simple_repeat 1 123 0 7 1298 796 177 0 7 chr15 93568739 93568881 -9926093 - B1F2 SINE Alu -7 142 2 7 1298 276 100 0 0 chr15 93568921 93568961 -9926013 + (A)n Simple_repeat Simple_repeat 1 40 0 7 1298 229 339 8 24 chr15 93570457 93570581 -9924393 + MTEb LTR MaLR 250 371 -8 7 1298 1119 158 112 10 chr15 93572755 93572960 -9922014 + URR1A DNA MER1_type 1 226 0 7 1298 482 295 31 0 chr15 93573022 93573151 -9921823 + B1F SINE Alu 10 142 -7 7 1298 1124 192 9 9 chr15 93573241 93573462 -9921512 + URR1A DNA MER1_type 1 221 -5 7 1298 537 271 0 90 chr15 93573577 93573743 -9921231 + B3A SINE B2 2 152 -46 7 1298 477 0 0 0 chr15 93573764 93573817 -9921157 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 1298 191 388 0 0 chr15 93575164 93575231 -9919743 - MIRb SINE MIR -31 237 171 7 1298 329 262 25 39 chr15 93576115 93576268 -9918706 - L1MA5 LINE L1 -363 5937 5729 8 1298 225 214 35 35 chr15 93576593 93576651 -9918323 - Lx7 LINE L1 -12 7684 7627 8 1298 615 331 47 19 chr15 93576652 93576972 -9918002 - Lx7 LINE L1 -1533 6163 5835 8 1298 2651 235 55 55 chr15 93576970 93576997 -9917977 + Lx7 LINE L1 4596 4624 -1256 8 1298 456 51 0 0 chr15 93576997 93577056 -9917918 + (CA)n Simple_repeat Simple_repeat 2 60 0 8 1298 2651 235 55 55 chr15 93577056 93577120 -9917854 + Lx7 LINE L1 4625 4696 -1184 8 1298 1366 86 16 21 chr15 93577120 93577311 -9917663 - B2_Mm2 SINE B2 -5 190 1 8 1298 2651 235 55 55 chr15 93577311 93578054 -9916920 + Lx7 LINE L1 4697 5431 -449 8 1298 666 200 7 15 chr15 93578046 93578183 -9916791 + Lx7 LINE L1 5689 5824 -1872 8 1298 315 71 0 0 chr15 93578916 93578958 -9916016 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 8 1298 939 272 76 92 chr15 93579513 93579685 -9915289 - MTE2a LTR MaLR 0 379 191 8 1298 324 111 0 0 chr15 93579685 93579739 -9915235 + (CTTG)n Simple_repeat Simple_repeat 1 54 0 8 1298 939 272 76 92 chr15 93579739 93579947 -9915027 - MTE2a LTR MaLR -189 190 5 8 1298 646 285 104 58 chr15 93579951 93580454 -9914520 + MT2A LTR ERVL 4 543 -19 8 1298 421 127 12 12 chr15 93580541 93580598 -9914376 + polypyrimidine Low_complexity Low_complexity 25 81 0 9 1298 1329 73 0 0 chr15 93580598 93580776 -9914198 + (TTC)n Simple_repeat Simple_repeat 2 179 0 9 1298 421 127 12 12 chr15 93580776 93580798 -9914176 + polypyrimidine Low_complexity Low_complexity 2 24 0 9 1298 288 0 0 0 chr15 93580798 93580830 -9914144 + (TC)n Simple_repeat Simple_repeat 1 32 0 9 1298 563 294 5 11 chr15 93580894 93581080 -9913894 + L1MA8 LINE L1 5866 6050 -241 9 1298 192 143 0 0 chr15 93581088 93581130 -9913844 + (T)n Simple_repeat Simple_repeat 1 42 0 9 1298 189 0 0 0 chr15 93582133 93582154 -9912820 + (A)n Simple_repeat Simple_repeat 1 21 0 9 1298 345 47 0 0 chr15 93582823 93582866 -9912108 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 1298 246 116 0 0 chr15 93582939 93582982 -9911992 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 1298 11069 60 9 3 chr15 93583031 93585137 -9909837 - L1Md_F2 LINE L1 0 6582 4466 9 162 1730 173 0 7 chr15 93585149 93585457 -9909517 - L1Md_F LINE L1 -6148 371 66 1 1299 186 189 0 0 chr15 93585612 93585649 -9909325 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1299 1341 240 109 3 chr15 93586031 93586399 -9908575 + MTD LTR MaLR 13 419 0 1 1299 558 302 119 25 chr15 93586408 93586693 -9908281 + MTEa LTR MaLR 55 366 -13 1 1299 324 0 0 0 chr15 93588524 93588560 -9906414 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1299 366 363 70 73 chr15 93589183 93589510 -9905464 - MLT1J1 LTR MaLR -7 437 112 1 1299 204 83 56 0 chr15 93589911 93589947 -9905027 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 1 1299 260 309 49 0 chr15 93590480 93590603 -9904371 + CT-rich Low_complexity Low_complexity 1 129 0 1 1299 355 200 32 32 chr15 93591554 93591647 -9903327 - MTC LTR MaLR -328 93 1 1 1299 261 0 0 0 chr15 93591786 93591815 -9903159 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 1299 195 69 0 0 chr15 93591833 93591862 -9903112 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 1299 352 231 218 24 chr15 93593201 93593307 -9901667 + RSINE1 SINE B4 18 149 -16 1 1299 609 14 0 0 chr15 93593307 93593377 -9901597 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1299 352 231 218 24 chr15 93593377 93593394 -9901580 + RSINE1 SINE B4 150 165 0 1 1299 479 284 98 22 chr15 93595656 93595973 -9899001 - RLTR15 LTR ERVK -18 341 1 1 1299 864 258 59 24 chr15 93596811 93597065 -9897909 + Lx6 LINE L1 7198 7460 0 1 1299 26 30 0 0 chr15 93597289 93597322 -9897652 + AT_rich Low_complexity Low_complexity 1 33 0 1 1299 202 261 0 0 chr15 93597678 93597724 -9897250 - L2c LINE L2 -318 3069 3024 1 1299 771 321 44 24 chr15 93598291 93598629 -9896345 - LTR53 LTR ERVL -166 353 9 1 1299 276 30 0 0 chr15 93599108 93599141 -9895833 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1299 347 352 15 35 chr15 93599299 93599499 -9895475 + MLT1E1 LTR MaLR 450 645 -9 1 1299 288 0 0 0 chr15 93599850 93599882 -9895092 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1299 207 286 19 9 chr15 93602302 93602408 -9892566 + (TTATA)n Simple_repeat Simple_repeat 3 109 0 1 1299 599 291 76 30 chr15 93602409 93602671 -9892303 - Lx8 LINE L1 -5 7468 7195 1 1299 297 0 0 0 chr15 93603520 93603553 -9891421 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1299 402 21 0 0 chr15 93603553 93603599 -9891375 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 1299 2115 194 42 5 chr15 93604159 93604564 -9890410 + MTC LTR MaLR 1 420 -1 1 1299 297 296 118 6 chr15 93605740 93605910 -9889064 + MER5A DNA MER1_type 1 189 0 1 1299 278 267 56 0 chr15 93606226 93606316 -9888658 + MIRc SINE MIR 64 158 -110 1 1299 24 32 0 0 chr15 93606349 93606380 -9888594 + AT_rich Low_complexity Low_complexity 1 31 0 1 1299 2056 180 2 82 chr15 93606387 93606877 -9888097 + RMER4A LTR ERVK 16 466 0 1 1299 538 183 31 62 chr15 93606883 93607011 -9887963 - B1_Mur1 SINE Alu -21 128 5 1 1299 428 202 6 47 chr15 93607132 93607303 -9887671 + C-rich Low_complexity Low_complexity 1 164 0 1 1299 747 275 75 50 chr15 93608082 93608450 -9886524 - MTD LTR MaLR -6 373 1 1 1299 765 85 0 0 chr15 93608556 93608662 -9886312 + (TTC)n Simple_repeat Simple_repeat 1 106 0 1 1299 498 285 8 8 chr15 93608689 93608813 -9886161 - ID_B1 SINE B4 -17 207 84 1 1299 3823 251 87 26 chr15 93609846 93611059 -9883915 - Lx8 LINE L1 -9 7464 6178 1 1299 980 274 142 65 chr15 93611065 93611713 -9883261 - L1_Rod LINE L1 -31 5816 5119 1 1299 565 276 61 141 chr15 93611872 93612184 -9882790 + B4 SINE B4 5 291 -1 1 1299 552 375 25 25 chr15 93612319 93612601 -9882373 - B4A SINE B4 -10 282 1 1 1299 180 111 0 0 chr15 93612614 93612641 -9882333 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 1 1299 198 167 0 0 chr15 93614154 93614190 -9880784 + A-rich Low_complexity Low_complexity 1 36 0 1 1299 359 242 72 33 chr15 93615475 93615603 -9879371 - MIR SINE MIR -59 149 17 1 1299 381 257 19 45 chr15 93615768 93615905 -9879069 + MTEa LTR MaLR 233 377 -2 1 1299 280 255 39 10 chr15 93615956 93616059 -9878915 + MLT1L LTR MaLR 143 248 -362 1 1299 434 297 15 52 chr15 93616063 93616198 -9878776 + RSINE1 SINE B4 8 137 -28 1 1299 318 306 124 34 chr15 93616254 93616545 -9878429 + MLT1L LTR MaLR 255 571 -39 1 1299 192 152 0 0 chr15 93616658 93616691 -9878283 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1299 250 45 22 22 chr15 93621569 93621614 -9873360 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 1 1299 318 67 0 0 chr15 93622062 93622107 -9872867 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1299 820 212 6 23 chr15 93622885 93623059 -9871915 - URR1A DNA MER1_type -55 171 1 1 1299 212 175 0 0 chr15 93623059 93623099 -9871875 - PB1D7 SINE Alu -63 57 18 1 1299 891 158 7 14 chr15 93623833 93624116 -9870858 + (TATG)n Simple_repeat Simple_repeat 1 281 0 1 1299 254 245 51 74 chr15 93624602 93624753 -9870221 + RLTR15 LTR ERVK 50 278 -250 1 1299 2012 123 37 3 chr15 93624938 93625265 -9869709 + ORR1A1 LTR MaLR 1 338 -8 1 1299 597 279 99 34 chr15 93625273 93625596 -9869378 + MTEa LTR MaLR 36 379 0 1 1299 898 250 50 120 chr15 93626389 93626771 -9868203 + ORR1E LTR MaLR 1 355 -4 1 1299 387 0 0 0 chr15 93626919 93626962 -9868012 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1299 597 126 0 0 chr15 93626962 93627072 -9867902 + (CA)n Simple_repeat Simple_repeat 2 112 0 1 1299 400 306 0 16 chr15 93627101 93627224 -9867750 + MTE-int LTR MaLR 135 255 -1325 1 1299 461 158 10 0 chr15 93627245 93627346 -9867628 + (TG)n Simple_repeat Simple_repeat 2 103 0 1 1299 747 33 0 0 chr15 93627491 93627581 -9867393 + (TTC)n Simple_repeat Simple_repeat 2 91 0 1 1299 252 86 0 0 chr15 93628136 93628171 -9866803 + (GGAA)n Simple_repeat Simple_repeat 1 35 0 1 1299 1106 0 16 0 chr15 93628382 93628511 -9866463 + (TTTCC)n Simple_repeat Simple_repeat 5 135 0 1 1299 423 38 0 0 chr15 93628511 93628564 -9866410 + (TCCCC)n Simple_repeat Simple_repeat 5 57 0 1 1299 952 154 0 20 chr15 93628585 93628598 -9866376 - B1_Mur3 SINE Alu 0 149 137 1 1299 276 30 0 0 chr15 93628598 93628631 -9866343 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1 1299 952 154 0 20 chr15 93628631 93628769 -9866205 - B1_Mur3 SINE Alu -13 136 1 1 1299 328 275 51 51 chr15 93630027 93630066 -9864908 - Tigger7 DNA MER2_type -45 2446 2411 1 1299 1404 259 50 17 chr15 93630066 93630424 -9864550 - ORR1D2 LTR MaLR 0 370 1 1 1299 328 275 51 51 chr15 93630424 93630541 -9864433 - Tigger7 DNA MER2_type -81 2410 2290 1 1299 794 219 66 0 chr15 93630535 93630718 -9864256 - MTD LTR MaLR -223 196 2 1 1299 438 20 0 0 chr15 93630718 93630769 -9864205 + (CAAAC)n Simple_repeat Simple_repeat 3 53 0 1 1299 247 133 44 0 chr15 93630936 93630981 -9863993 + MTD LTR MaLR 359 405 -14 1 1299 397 50 33 0 chr15 93632789 93632849 -9862125 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 1299 360 0 0 0 chr15 93632856 93632896 -9862078 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1299 441 0 0 0 chr15 93632896 93632944 -9862030 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 1299 2290 266 186 6 chr15 93632948 93633761 -9861213 + Lx8 LINE L1 6190 7148 -325 1 1299 195 42 0 0 chr15 93633762 93633786 -9861188 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 1299 294 265 137 0 chr15 93633796 93633898 -9861076 - L1MEg LINE L1 -502 5660 5545 1 1299 358 232 0 18 chr15 93634051 93634165 -9860809 + CT-rich Low_complexity Low_complexity 4 115 0 1 1299 319 298 18 0 chr15 93634191 93634305 -9860669 - PB1D10 SINE Alu -1 116 1 1 1299 22 0 0 0 chr15 93634460 93634482 -9860492 + AT_rich Low_complexity Low_complexity 1 22 0 1 1299 290 206 27 14 chr15 93634630 93634704 -9860270 + CT-rich Low_complexity Low_complexity 2 76 0 1 1299 282 295 44 73 chr15 93634854 93635059 -9859915 - L1MEg LINE L1 -1351 4795 4597 1 1299 902 292 181 57 chr15 93635056 93636136 -9858838 - L1MC3 LINE L1 -8 7777 6563 1 1299 216 0 0 0 chr15 93636206 93636230 -9858744 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1299 360 0 0 0 chr15 93636788 93636828 -9858146 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1 1299 671 318 58 23 chr15 93636909 93637302 -9857672 - L1MEg LINE L1 -2170 3976 3570 1 1299 2884 80 27 35 chr15 93637306 93637709 -9857265 + MTB LTR MaLR 1 400 0 1 1299 443 305 93 0 chr15 93637734 93637885 -9857089 + B3A SINE B2 1 165 -33 1 1299 289 299 0 86 chr15 93637985 93638102 -9856872 - RSINE1 SINE B4 -55 110 4 1 1299 333 0 0 0 chr15 93638214 93638251 -9856723 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1299 576 294 31 84 chr15 93638252 93638575 -9856399 + RLTR18 LTR ERVK 5 310 -306 1 1299 643 316 49 21 chr15 93638622 93638910 -9856064 + RLTR18B LTR ERVK 187 482 -30 1 1299 183 42 0 0 chr15 93638941 93638965 -9856009 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1299 286 231 92 60 chr15 93639242 93639426 -9855548 - L1MEg LINE L1 -3144 3002 2813 1 1299 1160 69 0 0 chr15 93639725 93639870 -9855104 - B1_Mus1 SINE Alu -2 146 2 1 1299 926 254 92 24 chr15 93639930 93640225 -9854749 + Lx5 LINE L1 6735 7049 -1 1 1299 253 255 86 52 chr15 93640249 93640365 -9854609 - L1MEg LINE L1 -3609 2537 2418 1 1299 387 0 0 0 chr15 93640694 93640737 -9854237 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1299 369 311 92 0 chr15 93640739 93640999 -9853975 - L1MEg LINE L1 -4274 1968 1685 1 1299 349 252 132 102 chr15 93641058 93641536 -9853438 - L1MEg LINE L1 -4651 1591 1100 1 1299 26 0 0 0 chr15 93641614 93641640 -9853334 + AT_rich Low_complexity Low_complexity 1 26 0 1 1299 281 255 41 0 chr15 93642012 93642092 -9852882 - ID4 SINE ID -58 94 12 1 1299 231 284 22 120 chr15 93642024 93642116 -9852858 - ID SINE ID -141 83 1 1 1299 1975 289 75 22 chr15 93642202 93643142 -9851832 - Lx8 LINE L1 -6 7467 6625 1 1299 1808 229 12 17 chr15 93643146 93643559 -9851415 - MTD LTR MaLR -8 411 1 1 1299 232 254 36 0 chr15 93643574 93643629 -9851345 - Lx9 LINE L1 -889 6755 6699 1 1299 459 321 57 31 chr15 93643634 93643827 -9851147 - Lx8 LINE L1 -1097 6376 6179 1 1299 312 182 0 0 chr15 93643827 93643915 -9851059 + (CA)n Simple_repeat Simple_repeat 1 88 0 1 1299 256 258 29 49 chr15 93643918 93644020 -9850954 - Lx8 LINE L1 -1310 6163 6064 1 1299 261 270 9 45 chr15 93644071 93644182 -9850792 + Lx6 LINE L1 5798 5900 -1109 1 1299 4482 188 15 80 chr15 93644687 93645671 -9849303 - Lx7 LINE L1 -1 7695 6776 2 1299 495 198 0 10 chr15 93645676 93645773 -9849201 + MTC LTR MaLR 6 101 -306 2 1299 1970 233 15 21 chr15 93645812 93646289 -9848685 + RMER19C LTR ERVK 138 611 0 2 1299 1903 162 0 22 chr15 93646289 93646601 -9848373 + MTC LTR MaLR 109 413 -8 2 1299 3082 188 61 18 chr15 93646604 93647215 -9847759 - Lx7 LINE L1 -915 6781 6145 2 1299 3444 185 92 73 chr15 93647274 93648148 -9846826 - RMER19B LTR ERVK -12 890 1 2 1299 1827 160 108 4 chr15 93648148 93648574 -9846400 - Lx7 LINE L1 -1691 6005 5545 2 1299 197 329 0 0 chr15 93648710 93648780 -9846194 + MIRc SINE MIR 174 243 -25 2 1299 531 284 87 53 chr15 93649402 93649908 -9845066 - L1_Rod LINE L1 -4066 1781 1259 2 1299 743 20 10 20 chr15 93649924 93650026 -9844948 + B1_Mus2 SINE Alu 47 147 0 2 1299 311 232 12 0 chr15 93650382 93650464 -9844510 - L1MEc LINE L1 -5547 853 771 2 1299 315 266 84 23 chr15 93650560 93650691 -9844283 - L1MEc LINE L1 -5505 895 757 2 1299 236 167 59 82 chr15 93650697 93650782 -9844192 - Lx9 LINE L1 -12 7632 7550 2 1299 211 54 26 26 chr15 93650784 93650822 -9844152 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 2 1299 237 108 0 0 chr15 93650823 93650860 -9844114 + (TCCC)n Simple_repeat Simple_repeat 3 39 0 2 1299 241 223 0 25 chr15 93651007 93651073 -9843901 - ID4_ SINE ID -9 74 13 2 1299 252 314 29 0 chr15 93651110 93651179 -9843795 - B1F2 SINE Alu -225 70 1 2 1299 1701 272 114 27 chr15 93651393 93651945 -9843029 + Lx8 LINE L1 6581 7180 -293 2 1299 525 307 44 36 chr15 93651966 93652216 -9842758 + Lx8 LINE L1 7217 7468 -5 2 1299 270 302 50 33 chr15 93652311 93652431 -9842543 + RSINE1 SINE B4 2 123 -42 2 1299 261 0 0 0 chr15 93652437 93652466 -9842508 + (TC)n Simple_repeat Simple_repeat 1 29 0 2 1299 252 77 0 0 chr15 93652949 93652988 -9841986 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1299 845 67 30 0 chr15 93653036 93653170 -9841804 + (GGAGA)n Simple_repeat Simple_repeat 3 140 0 2 1299 606 266 118 6 chr15 93653235 93653413 -9841561 + B3 SINE B2 4 201 -15 2 1299 207 69 0 0 chr15 93656204 93656233 -9838741 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 2 1299 6488 63 39 0 chr15 93657506 93657537 -9837437 - Lx3_Mus LINE L1 0 7009 6979 2 1299 450 0 0 0 chr15 93657537 93657587 -9837387 + (CATTC)n Simple_repeat Simple_repeat 2 51 0 2 1299 6488 63 39 0 chr15 93657587 93658398 -9836576 - Lx3_Mus LINE L1 -31 6978 6136 2 1299 5922 65 21 2 chr15 93658398 93659380 -9835594 + Lx3_Mus LINE L1 5124 6132 -877 2 1299 2368 92 6 3 chr15 93660071 93660397 -9834577 + ORR1A2 LTR MaLR 1 327 0 2 1299 21 0 0 0 chr15 93660662 93660683 -9834291 + AT_rich Low_complexity Low_complexity 1 21 0 2 1299 279 0 0 0 chr15 93661080 93661111 -9833863 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1299 441 0 0 0 chr15 93661340 93661389 -9833585 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1299 584 307 118 16 chr15 93661667 93661922 -9833052 + B4A SINE B4 6 286 -6 2 1299 222 37 0 0 chr15 93661949 93661976 -9832998 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2 1299 321 172 0 0 chr15 93662040 93662104 -9832870 + GA-rich Low_complexity Low_complexity 4 67 0 2 1299 1933 166 92 18 chr15 93664359 93664595 -9830379 + MTC LTR MaLR 1 253 -168 2 1299 3379 35 5 0 chr15 93664595 93664989 -9829985 + MTA_Mm LTR MaLR 1 396 0 2 1299 1933 166 92 18 chr15 93664989 93665144 -9829830 + MTC LTR MaLR 254 421 0 2 1299 489 259 77 0 chr15 93665192 93665362 -9829612 - MER53 DNA hAT -6 187 5 2 1299 206 292 13 40 chr15 93665579 93665654 -9829320 + L2b LINE L2 3302 3374 -1 2 1299 195 42 0 0 chr15 93666379 93666403 -9828571 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1299 1211 28 7 7 chr15 93666406 93666552 -9828422 - B1_Mm SINE Alu 0 147 2 2 1299 230 298 28 46 chr15 93666580 93666689 -9828285 - MLT1I LTR MaLR 0 411 305 2 1299 1143 185 13 9 chr15 93667711 93667935 -9827039 - URR1B DNA MER1_type 0 225 1 2 1299 246 128 0 0 chr15 93668926 93668965 -9826009 + (T)n Simple_repeat Simple_repeat 1 39 0 2 1299 859 234 67 107 chr15 93669824 93670284 -9824690 + RMER10A LTR ERVL 1 442 0 2 1299 302 344 101 0 chr15 93670457 93670675 -9824299 - L1MC3 LINE L1 -87 7698 7459 2 1299 369 200 8 167 chr15 93670683 93670761 -9824213 - ORR1D1 LTR MaLR 0 374 315 2 1299 468 0 0 0 chr15 93670761 93670813 -9824161 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1299 369 200 8 167 chr15 93670813 93670860 -9824114 - ORR1D1 LTR MaLR -60 314 269 2 1299 466 241 98 42 chr15 93670873 93670953 -9824021 - RLTR20C LTR ERVK -12 566 490 2 1299 225 65 0 0 chr15 93670953 93670984 -9823990 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1299 466 241 98 42 chr15 93670984 93671046 -9823928 - RLTR20C LTR ERVK -89 489 417 2 1299 887 177 141 65 chr15 93671038 93671328 -9823646 - RLTR20C LTR ERVK -222 312 1 2 1299 353 279 14 65 chr15 93671328 93671430 -9823544 - ORR1D1 LTR MaLR -114 260 166 2 1299 678 174 0 0 chr15 93671432 93671604 -9823370 + GA-rich Low_complexity Low_complexity 1 172 0 2 1299 514 206 20 10 chr15 93671604 93671702 -9823272 - ORR1D1 LTR MaLR -193 181 83 2 1299 1564 194 118 5 chr15 93671911 93672285 -9822689 - MTD LTR MaLR -3 416 1 2 1299 950 275 103 33 chr15 93672479 93672810 -9822164 - MTE2b LTR MaLR -21 358 5 2 1299 1979 158 0 30 chr15 93672901 93673272 -9821702 - ORR1B1 LTR MaLR 0 394 35 2 1299 207 0 0 0 chr15 93673389 93673412 -9821562 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2 1299 1014 104 0 0 chr15 93673412 93673546 -9821428 - B1_Mus2 SINE Alu -12 135 2 2 1299 1546 59 0 0 chr15 93674289 93674476 -9820498 + B2_Mm1t SINE B2 1 187 -6 2 1299 529 269 78 34 chr15 93675838 93676042 -9818932 + B3 SINE B2 1 213 -3 2 1299 180 0 0 0 chr15 93676758 93676778 -9818196 + (TC)n Simple_repeat Simple_repeat 2 21 0 2 1299 207 0 0 0 chr15 93676778 93676800 -9818174 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1299 413 314 47 147 chr15 93678000 93678163 -9816811 - MTEa LTR MaLR -147 232 82 2 1299 1204 68 0 0 chr15 93678163 93678309 -9816665 - B1_Mus2 SINE Alu -1 146 1 2 1299 413 314 47 147 chr15 93678309 93678331 -9816643 - MTEa LTR MaLR -298 81 65 2 1299 2181 157 3 3 chr15 93678331 93678677 -9816297 + ORR1A1 LTR MaLR 1 346 0 2 1299 413 314 47 147 chr15 93678677 93678748 -9816226 - MTEa LTR MaLR -315 64 1 2 1299 1107 170 110 0 chr15 93679020 93679220 -9815754 + URR1A DNA MER1_type 2 223 -3 2 1299 25 0 0 0 chr15 93680316 93680341 -9814633 + AT_rich Low_complexity Low_complexity 1 25 0 2 1299 350 331 0 43 chr15 93680520 93680659 -9814315 - B3 SINE B2 -83 133 1 2 1299 432 97 0 0 chr15 93680721 93680783 -9814191 + (A)n Simple_repeat Simple_repeat 1 62 0 2 1299 346 280 58 106 chr15 93682158 93682366 -9812608 + MLT1C LTR MaLR 76 273 -194 2 1299 1212 147 9 36 chr15 93683352 93683577 -9811397 + URR1B DNA MER1_type 2 220 -5 2 1299 572 264 134 10 chr15 93683918 93684158 -9810816 - MLT1D LTR MaLR -9 496 200 2 1299 657 0 0 0 chr15 93684465 93684538 -9810436 + (TC)n Simple_repeat Simple_repeat 2 74 0 2 1299 1038 178 1 1 chr15 93685077 93685275 -9809699 - ORR1C2 LTR MaLR 0 394 197 2 1299 288 139 150 12 chr15 93685282 93685362 -9809612 - ORR1C2 LTR MaLR -292 92 2 2 1299 261 286 0 0 chr15 93685577 93685654 -9809320 + CT-rich Low_complexity Low_complexity 2 78 0 2 1299 225 333 14 43 chr15 93685655 93685724 -9809250 - ID4_ SINE ID -16 67 1 2 1299 229 243 159 53 chr15 93685732 93685845 -9809129 - PB1 SINE Alu -2 125 1 2 1299 863 164 234 5 chr15 93686033 93686217 -9808757 - URR1A DNA MER1_type 0 226 1 2 1299 503 251 184 0 chr15 93687189 93687352 -9807622 + MTD LTR MaLR 3 195 -224 2 1299 250 294 0 34 chr15 93689081 93689169 -9805805 + ID_B1 SINE B4 84 168 -56 2 1299 360 0 0 0 chr15 93689981 93690021 -9804953 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 2 1299 1148 54 0 0 chr15 93690026 93690174 -9804800 - B2_Mm2 SINE B2 -41 154 7 2 1299 230 291 70 0 chr15 93690174 93690260 -9804714 - L1Md_F2 LINE L1 -14 6568 6477 2 1299 1194 48 0 27 chr15 93690309 93690459 -9804515 + B1_Mus2 SINE Alu 2 147 0 2 1299 220 241 0 17 chr15 93690460 93690519 -9804455 + A-rich Low_complexity Low_complexity 2 59 0 2 1299 296 231 185 28 chr15 93690643 93690833 -9804141 - L1MC2 LINE L1 -307 6026 5804 2 1299 436 265 32 49 chr15 93691866 93691989 -9802985 - B4A SINE B4 -171 121 1 2 1299 542 169 2 39 chr15 93692266 93692680 -9802294 + (TG)n Simple_repeat Simple_repeat 1 398 0 2 1299 699 211 0 8 chr15 93693710 93693839 -9801135 - B1_Mus2 SINE Alu -19 128 1 2 1299 225 214 255 0 chr15 93694352 93694450 -9800524 - L1ME2z LINE L1 -2 6505 6383 2 1299 978 307 115 14 chr15 93694538 93695042 -9799932 - L1ME2z LINE L1 -418 6114 5560 2 1299 455 195 0 0 chr15 93695083 93695165 -9799809 + (TA)n Simple_repeat Simple_repeat 1 82 0 2 1299 675 228 0 0 chr15 93695165 93695345 -9799629 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1299 669 235 0 0 chr15 93695359 93695538 -9799436 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 1299 846 305 131 17 chr15 93695541 93696443 -9798531 - L1ME2z LINE L1 -3124 3195 2183 2 1299 38992 42 0 3 chr15 93697493 93703966 -9791008 - L1Md_T LINE L1 0 6585 34 2 1299 22 0 0 0 chr15 93704438 93704460 -9790514 + AT_rich Low_complexity Low_complexity 1 22 0 2 1299 308 320 20 0 chr15 93704960 93705113 -9789861 + (CATG)n Simple_repeat Simple_repeat 4 159 0 2 1299 369 0 0 0 chr15 93705114 93705155 -9789819 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1299 216 248 10 19 chr15 93705155 93705258 -9789716 + (CATATA)n Simple_repeat Simple_repeat 4 105 0 2 1299 1575 108 87 16 chr15 93705281 93705357 -9789617 - L1Md_F2 LINE L1 -3 6579 6505 2 1299 204 40 0 0 chr15 93705357 93705382 -9789592 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 2 1299 1575 108 87 16 chr15 93705382 93705559 -9789415 - L1Md_F2 LINE L1 -78 6504 6309 2 1299 1255 87 29 6 chr15 93705559 93705733 -9789241 - B2_Mm2 SINE B2 -16 179 2 2 1299 446 302 0 11 chr15 93705791 93706004 -9788970 + (TATG)n Simple_repeat Simple_repeat 1 210 0 2 1299 657 0 0 0 chr15 93709151 93709224 -9785750 + (GA)n Simple_repeat Simple_repeat 2 74 0 2 1299 183 129 0 0 chr15 93709225 93709256 -9785718 + (AGGGGG)n Simple_repeat Simple_repeat 2 32 0 2 1299 326 260 0 0 chr15 93709358 93709438 -9785536 - Lx9 LINE L1 -1155 6489 6431 2 1299 591 15 0 0 chr15 93711590 93711658 -9783316 + (GA)n Simple_repeat Simple_repeat 1 68 0 2 1299 1871 169 9 89 chr15 93712062 93712311 -9782663 + RMER10B LTR ERVL 4 230 -168 2 1299 1355 57 0 15 chr15 93712311 93712649 -9782325 + (TCTCC)n Simple_repeat Simple_repeat 1 332 0 2 1299 1871 169 9 89 chr15 93712649 93712826 -9782148 + RMER10B LTR ERVL 231 396 -2 2 1299 510 290 130 45 chr15 93713281 93713635 -9781339 + MLT1B LTR MaLR 5 388 -2 2 1299 919 9 17 9 chr15 93714041 93714157 -9780817 + (TTTC)n Simple_repeat Simple_repeat 3 119 0 3 1299 708 35 0 0 chr15 93714157 93714244 -9780730 + (TTC)n Simple_repeat Simple_repeat 2 88 0 3 1299 591 240 116 17 chr15 93714244 93714477 -9780497 - L1MD3 LINE L1 -165 7830 7575 3 1299 433 325 36 36 chr15 93714847 93715067 -9779907 + MLT1A0 LTR MaLR 146 365 0 3 1299 1628 187 18 15 chr15 93715234 93715565 -9779409 + RLTR12A LTR ERVK 233 564 -4 3 1300 758 237 26 56 chr15 93716584 93716852 -9778122 + RLTR11A2 LTR ERVK 1 260 -267 3 1300 413 271 47 108 chr15 93716886 93717118 -9777856 + RLTR11A2 LTR ERVK 214 431 -22 3 1300 189 74 0 0 chr15 93717231 93717258 -9777716 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 3 1300 3519 23 2 0 chr15 93717295 93717690 -9777284 + MTA_Mm LTR MaLR 1 396 0 3 1300 259 279 139 0 chr15 93719165 93719251 -9775723 + RMER30 DNA MER1_type 103 200 -2 3 1300 708 314 89 52 chr15 93719579 93720188 -9774786 - Lx8 LINE L1 -1 7472 6842 3 1300 737 174 61 75 chr15 93721941 93722136 -9772838 - ORR1D1 LTR MaLR 0 374 182 3 1300 279 0 0 0 chr15 93722136 93722167 -9772807 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1300 737 174 61 75 chr15 93722167 93722183 -9772791 - ORR1D1 LTR MaLR -193 181 166 3 1300 374 101 14 0 chr15 93722183 93722252 -9772722 + (GA)n Simple_repeat Simple_repeat 1 70 0 3 1300 818 198 23 22 chr15 93722256 93722498 -9772476 - ORR1D1 LTR MaLR -135 243 1 3 1300 184 340 26 71 chr15 93722651 93722806 -9772168 - MIR3 SINE MIR 0 208 61 3 1300 195 301 115 0 chr15 93722938 93723069 -9771905 + MIRc SINE MIR 29 169 -99 3 1300 249 344 0 0 chr15 93724098 93724188 -9770786 + GA-rich Low_complexity Low_complexity 1 90 0 3 1300 184 321 99 18 chr15 93725327 93725438 -9769536 + L2 LINE L2 2953 3072 -347 3 1300 615 196 0 0 chr15 93726217 93726380 -9768594 + (CA)n Simple_repeat Simple_repeat 2 164 0 3 1300 924 156 0 0 chr15 93726412 93726592 -9768382 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1300 652 287 39 5 chr15 93727974 93728155 -9766819 - B4A SINE B4 -13 279 92 3 1300 374 246 87 0 chr15 93728155 93728281 -9766693 - MTD LTR MaLR 0 419 283 3 1300 1849 225 99 54 chr15 93728342 93728916 -9766058 - RMER13A LTR ERVK -242 618 19 3 1300 1248 171 36 75 chr15 93728983 93729318 -9765656 - RLTRETN_Mm LTR ERVK 0 322 1 3 1300 235 262 87 95 chr15 93729364 93729617 -9765357 + L1MEe LINE L1 926 1176 -4943 3 1300 447 337 32 47 chr15 93730082 93730421 -9764553 + L1MEe LINE L1 1892 2225 -3924 3 1300 244 336 73 0 chr15 93730630 93730767 -9764207 + L1M5 LINE L1 5652 5798 -442 3 1300 27 0 0 0 chr15 93730869 93730896 -9764078 + GC_rich Low_complexity Low_complexity 1 27 0 3 1300 186 213 136 85 chr15 93731496 93731614 -9763360 + MIR3 SINE MIR 50 173 -35 3 1300 537 338 57 24 chr15 93731715 93732048 -9762926 - MER34A LTR ERV1 -227 344 1 3 1300 278 222 0 11 chr15 93733800 93733891 -9761083 + (CA)n Simple_repeat Simple_repeat 1 90 0 3 1300 393 95 0 0 chr15 93733935 93733998 -9760976 + (GA)n Simple_repeat Simple_repeat 1 63 0 3 1300 180 0 0 0 chr15 93736779 93736799 -9758175 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 1300 396 0 0 0 chr15 93739336 93739380 -9755594 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1300 180 0 0 0 chr15 93739380 93739399 -9755575 + (CG)n Simple_repeat Simple_repeat 1 20 0 3 1300 258 42 0 59 chr15 93739783 93739834 -9755140 + (CAAAC)n Simple_repeat Simple_repeat 2 49 0 3 1300 189 107 0 0 chr15 93740405 93740433 -9754541 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 3 1300 279 261 152 43 chr15 93740482 93740574 -9754400 - PB1D10 SINE Alu -15 102 1 3 1300 189 139 0 0 chr15 93740725 93740768 -9754206 + (CAAAAA)n Simple_repeat Simple_repeat 4 46 0 3 1300 266 122 0 0 chr15 93741070 93741111 -9753863 + URR1B DNA MER1_type 184 224 -1 3 1300 198 103 0 0 chr15 93742295 93742324 -9752650 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 3 1300 245 307 34 34 chr15 93744817 93744935 -9750039 + ORR1E LTR MaLR 8 125 -234 3 1300 432 0 0 0 chr15 93744961 93745009 -9749965 + (TC)n Simple_repeat Simple_repeat 1 48 0 3 1300 1797 303 31 45 chr15 93745530 93745823 -9749151 - Lx8 LINE L1 -457 7016 6734 3 1300 1108 129 140 0 chr15 93745823 93746016 -9748958 + URR1A DNA MER1_type 3 222 -4 3 1300 1797 303 31 45 chr15 93746016 93746409 -9748565 - Lx8 LINE L1 -740 6733 6340 3 1300 435 254 90 23 chr15 93746546 93746679 -9748295 + B1F SINE Alu 8 149 0 3 1300 1225 166 9 18 chr15 93746935 93747156 -9747818 + URR1B DNA MER1_type 7 225 0 3 1300 369 0 0 0 chr15 93748040 93748081 -9746893 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1300 1281 50 0 0 chr15 93749022 93749183 -9745791 + (TCCC)n Simple_repeat Simple_repeat 1 161 0 3 1300 257 100 0 20 chr15 93749892 93749943 -9745031 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 3 1300 668 196 12 81 chr15 93751756 93751928 -9743046 - B3A SINE B2 -38 160 1 3 1300 925 208 8 89 chr15 93752598 93752835 -9742139 + URR1B DNA MER1_type 7 224 -1 3 1300 561 30 0 0 chr15 93752901 93752968 -9742006 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 3 1300 369 0 0 0 chr15 93753304 93753345 -9741629 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1300 684 67 0 0 chr15 93753802 93753892 -9741082 + (TC)n Simple_repeat Simple_repeat 2 91 0 3 1300 220 263 89 59 chr15 93753944 93754045 -9740929 + PB1D7 SINE Alu 15 118 -2 3 1300 596 135 9 0 chr15 93754056 93754167 -9740807 + (CA)n Simple_repeat Simple_repeat 1 112 0 3 1300 884 36 9 0 chr15 93754466 93754578 -9740396 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 3 1300 504 0 0 0 chr15 93754580 93754636 -9740338 + (GA)n Simple_repeat Simple_repeat 1 56 0 3 1300 504 0 0 0 chr15 93755202 93755258 -9739716 + (GA)n Simple_repeat Simple_repeat 2 57 0 3 1300 180 0 0 0 chr15 93756266 93756286 -9738688 + (CAGA)n Simple_repeat Simple_repeat 3 22 0 3 1300 955 191 100 67 chr15 93756286 93756644 -9738330 + RLTR20C LTR ERVK 1 489 -89 3 1300 408 55 0 0 chr15 93756644 93756699 -9738275 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1300 500 252 65 22 chr15 93756699 93756778 -9738196 + RLTR20C LTR ERVK 490 566 -12 3 1300 315 0 0 0 chr15 93756789 93756824 -9738150 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1300 405 0 0 0 chr15 93756824 93756868 -9738106 + (GA)n Simple_repeat Simple_repeat 2 46 0 3 1300 705 150 33 24 chr15 93756946 93757284 -9737690 + CT-rich Low_complexity Low_complexity 1 341 0 3 1300 26 30 0 0 chr15 93757915 93757948 -9737026 + AT_rich Low_complexity Low_complexity 1 33 0 3 1300 360 0 0 0 chr15 93759354 93759394 -9735580 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 3 1300 600 257 36 46 chr15 93759868 93760064 -9734910 + B3 SINE B2 1 194 -22 3 1300 419 203 188 78 chr15 93760456 93760584 -9734390 - RSINE1 SINE B4 -21 144 3 3 1300 375 202 20 29 chr15 93760722 93760824 -9734150 + HAL1-2a_MD LINE L1 2424 2524 -500 3 1300 415 287 138 50 chr15 93761082 93761379 -9733595 + MTEb LTR MaLR 3 325 -54 3 1300 240 43 43 21 chr15 93761973 93762020 -9732954 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 3 1300 477 192 0 0 chr15 93763107 93763237 -9731737 + GA-rich Low_complexity Low_complexity 1 130 0 3 1300 581 272 100 74 chr15 93764182 93764452 -9730522 + B4A SINE B4 2 278 -14 3 1300 333 0 0 0 chr15 93764462 93764499 -9730475 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1300 243 88 0 0 chr15 93764748 93764782 -9730192 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 1300 1038 53 0 0 chr15 93764794 93764927 -9730047 + (TCTCCC)n Simple_repeat Simple_repeat 4 136 0 3 1300 539 300 62 23 chr15 93765723 93765979 -9728995 - ERVL-E-int LTR ERVL -5381 286 21 3 1300 1697 195 37 3 chr15 93766040 93766394 -9728580 - MTC LTR MaLR -55 366 1 3 1300 202 253 24 37 chr15 93766806 93766888 -9728086 + (TATATG)n Simple_repeat Simple_repeat 5 85 0 3 1300 205 309 0 0 chr15 93766831 93766886 -9728088 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 1300 848 273 22 51 chr15 93766894 93767168 -9727806 - B4A SINE B4 -2 290 25 3 1300 219 146 0 0 chr15 93767614 93767655 -9727319 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1300 203 313 30 20 chr15 93767707 93767808 -9727166 + L2a LINE L2 2491 2592 -827 3 1300 740 315 77 16 chr15 93768128 93768493 -9726481 + L2a LINE L2 3035 3421 -5 3 1300 3055 54 30 15 chr15 93769873 93770267 -9724707 + MTB LTR MaLR 1 400 0 3 1300 25 31 0 0 chr15 93770287 93770319 -9724655 + AT_rich Low_complexity Low_complexity 1 32 0 3 1300 926 233 19 9 chr15 93770645 93770857 -9724117 - B3 SINE B2 0 216 3 3 1300 24 53 0 0 chr15 93770933 93770971 -9724003 + AT_rich Low_complexity Low_complexity 1 38 0 3 1300 414 0 0 0 chr15 93771037 93771083 -9723891 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 1300 550 267 26 74 chr15 93771099 93771177 -9723797 + L1MA7 LINE L1 4743 4813 -1330 3 1300 2358 174 17 21 chr15 93771177 93771595 -9723379 + MTD LTR MaLR 4 419 0 3 1300 561 295 140 59 chr15 93771595 93772449 -9722525 + L1MA7 LINE L1 4811 5791 -500 3 1300 198 0 0 0 chr15 93772449 93772471 -9722503 + (TG)n Simple_repeat Simple_repeat 2 23 0 3 1300 555 305 163 44 chr15 93772471 93772538 -9722436 + L1MA7 LINE L1 5792 5863 -428 3 1300 724 359 48 33 chr15 93773245 93773764 -9721210 - MER74B LTR ERVL -31 591 65 3 1300 18012 141 18 12 chr15 93774811 93779023 -9715951 - Lx LINE L1 0 6654 2423 3 1300 1148 286 70 17 chr15 93781053 93781398 -9713576 - MTD LTR MaLR -39 380 18 3 1300 25 0 0 0 chr15 93782167 93782192 -9712782 + AT_rich Low_complexity Low_complexity 1 25 0 3 1300 21 0 0 0 chr15 93782660 93782681 -9712293 + AT_rich Low_complexity Low_complexity 1 21 0 3 1300 279 133 0 0 chr15 93783050 93783095 -9711879 + (T)n Simple_repeat Simple_repeat 1 45 0 3 1300 950 213 92 56 chr15 93783418 93783721 -9711253 + Lx2B LINE L1 6687 7000 0 3 1300 396 273 87 41 chr15 93783745 93783963 -9711011 + MLT1A0 LTR MaLR 80 307 -58 3 1300 225 65 0 0 chr15 93784228 93784259 -9710715 + (TC)n Simple_repeat Simple_repeat 2 32 0 3 1300 3363 204 51 35 chr15 93784443 93784734 -9710240 + Lx9 LINE L1 6707 6996 -648 4 1300 1096 73 7 0 chr15 93784734 93784870 -9710104 + B1_Mus1 SINE Alu 2 138 -10 4 1300 387 0 0 0 chr15 93784870 93784913 -9710061 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 4 1300 3363 204 51 35 chr15 93784913 93785367 -9709607 + Lx9 LINE L1 6997 7464 -180 4 1300 531 78 0 0 chr15 93785371 93785448 -9709526 + (TG)n Simple_repeat Simple_repeat 2 78 0 4 1300 251 114 23 0 chr15 93785617 93785661 -9709313 + (TC)n Simple_repeat Simple_repeat 2 46 0 4 1300 21 57 0 0 chr15 93785770 93785805 -9709169 + AT_rich Low_complexity Low_complexity 1 35 0 4 1300 280 103 35 0 chr15 93785973 93786031 -9708943 + (TTTC)n Simple_repeat Simple_repeat 3 62 0 4 1300 4361 50 87 0 chr15 93786385 93786904 -9708070 + LTRIS2 LTR ERV1 1 564 0 4 1300 217 206 0 60 chr15 93787027 93787094 -9707880 + GA-rich Low_complexity Low_complexity 3 65 0 4 1300 417 245 11 0 chr15 93788083 93788177 -9706797 - PB1D7 SINE Alu -2 118 24 4 1300 207 250 23 35 chr15 93788794 93788881 -9706093 + CT-rich Low_complexity Low_complexity 2 87 0 4 1300 240 316 164 17 chr15 93789023 93789310 -9705664 + L2 LINE L2 1943 2271 -1148 4 1300 31 76 0 0 chr15 93790139 93790205 -9704769 + AT_rich Low_complexity Low_complexity 1 66 0 4 1300 695 116 0 0 chr15 93791419 93791547 -9703427 + RMER19A LTR ERVK 2 189 -548 4 1300 775 100 0 53 chr15 93791567 93791757 -9703217 + GA-rich Low_complexity Low_complexity 1 180 0 4 1300 462 271 30 0 chr15 93791775 93791790 -9703184 + Lx9 LINE L1 7343 7357 -287 4 1300 1052 89 0 11 chr15 93791790 93791971 -9703003 + (GA)n Simple_repeat Simple_repeat 2 180 0 4 1300 462 271 30 0 chr15 93791971 93792083 -9702891 + Lx9 LINE L1 7358 7473 -171 4 1300 324 70 0 0 chr15 93792083 93792126 -9702848 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1300 462 271 30 0 chr15 93792126 93792163 -9702811 + Lx9 LINE L1 7474 7511 -133 4 1300 39 76 0 25 chr15 93792173 93792294 -9702680 + AT_rich Low_complexity Low_complexity 1 118 0 4 1300 362 217 44 50 chr15 93792294 93792494 -9702480 + Lx9 LINE L1 7370 7626 -18 4 1300 3286 219 100 26 chr15 93793142 93793981 -9700993 - Lx7 LINE L1 0 7696 6796 4 1300 1567 180 87 69 chr15 93793982 93794316 -9700658 - ORR1B1 LTR MaLR -8 386 47 4 1300 802 184 85 6 chr15 93794332 93794496 -9700478 - Lx7 LINE L1 -894 6802 6626 4 1300 449 248 8 58 chr15 93796304 93796424 -9698550 + PB1 SINE Alu 6 119 -8 4 1300 823 143 7 15 chr15 93796839 93796974 -9698000 + B2_Mm1t SINE B2 2 135 -58 4 1300 299 186 12 33 chr15 93797004 93797077 -9697897 + B2_Mm2 SINE B2 47 121 -95 4 1300 369 0 0 0 chr15 93797079 93797120 -9697854 + (TAA)n Simple_repeat Simple_repeat 3 43 0 4 1300 780 244 141 35 chr15 93797428 93797548 -9697426 - L1MA6 LINE L1 -31 6269 6124 4 1300 387 0 0 0 chr15 93797548 93797591 -9697383 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1300 780 244 141 35 chr15 93797591 93797789 -9697185 - L1MA6 LINE L1 -177 6123 5917 4 1300 325 219 149 14 chr15 93797786 93797934 -9697040 - L1MA6 LINE L1 -872 5428 5261 4 1300 234 308 128 0 chr15 93799193 93799271 -9695703 + MT2B LTR ERVL 154 241 -360 4 1300 399 267 144 0 chr15 93799206 93799296 -9695678 + PB1D10 SINE Alu 6 108 -9 4 1300 1475 70 5 16 chr15 93799329 93799517 -9695457 + B2_Mm2 SINE B2 2 187 -8 4 1300 249 328 0 29 chr15 93800516 93800585 -9694389 + PB1 SINE Alu 2 68 -52 4 1300 390 344 154 51 chr15 93801071 93801344 -9693630 - MLT1A1 LTR MaLR -7 401 101 4 1300 746 200 227 6 chr15 93802402 93802578 -9692396 - B3 SINE B2 -1 215 1 4 1300 356 293 49 121 chr15 93803971 93804182 -9690792 + MER33 DNA MER1_type 3 210 -114 4 1300 514 309 55 27 chr15 93804182 93804365 -9690609 + B3A SINE B2 2 189 -9 4 1300 337 291 39 157 chr15 93804365 93804501 -9690473 + MER33 DNA MER1_type 211 320 -4 4 1300 432 0 0 0 chr15 93805059 93805107 -9689867 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 1300 1797 215 40 5 chr15 93805238 93805608 -9689366 + MTD LTR MaLR 26 408 -11 4 1300 459 196 0 0 chr15 93806625 93806758 -9688216 + (TA)n Simple_repeat Simple_repeat 1 133 0 4 1300 374 251 72 24 chr15 93807132 93807299 -9687675 + L1M3 LINE L1 2998 3172 -2968 4 1300 554 251 62 39 chr15 93807304 93807519 -9687455 + L1M3 LINE L1 3814 4032 -2111 4 1300 254 192 153 3 chr15 93807589 93807673 -9687301 + L1M3 LINE L1 5725 5819 -472 4 1300 554 283 37 12 chr15 93807726 93807928 -9687046 - L1_Rod LINE L1 -1956 4190 3953 4 1300 1613 187 65 12 chr15 93807947 93808272 -9686702 - ORR1C1 LTR MaLR -35 343 2 4 1300 3625 168 32 185 chr15 93808804 93809914 -9685060 + RMER19B LTR ERVK 1 902 0 4 1300 1294 202 9 0 chr15 93810350 93810563 -9684411 - B3 SINE B2 0 216 2 4 1300 187 278 110 65 chr15 93812528 93812682 -9682292 + L2c LINE L2 3038 3198 -189 4 1300 263 140 70 0 chr15 93813456 93813513 -9681461 - L1MA6 LINE L1 -1 6299 6239 4 1300 247 140 20 20 chr15 93813692 93813743 -9681231 - B3 SINE B2 -5 211 161 4 1300 361 212 0 100 chr15 93813744 93813854 -9681120 - PB1 SINE Alu -7 120 22 4 1300 754 239 59 36 chr15 93813852 93814073 -9680901 + MTE2b LTR MaLR 151 376 -3 4 1300 245 109 22 0 chr15 93814074 93814120 -9680854 + (TCCA)n Simple_repeat Simple_repeat 4 50 0 4 1300 1080 268 58 39 chr15 93814218 93814529 -9680445 + MTEa LTR MaLR 2 318 -61 4 1300 212 148 16 0 chr15 93814532 93814593 -9680381 + T-rich Low_complexity Low_complexity 3 64 0 4 1300 1026 259 49 114 chr15 93814641 93815046 -9679928 - MTE2a LTR MaLR 0 379 1 4 1300 2300 213 72 6 chr15 93815337 93815847 -9679127 - RMER15 LTR ERVL -5 570 27 4 1300 267 252 99 20 chr15 93817709 93817810 -9677164 + MER117 DNA MER1_type 1 109 -88 4 1300 405 0 0 0 chr15 93817836 93817881 -9677093 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1300 355 316 171 33 chr15 93818018 93818352 -9676622 - MLT2C2 LTR ERVL -41 423 44 4 1300 816 259 110 33 chr15 93821246 93821536 -9673438 - MTE2a LTR MaLR -22 397 125 4 1300 3058 73 67 13 chr15 93822363 93822749 -9672225 - MTB_Mm LTR MaLR 0 407 1 4 1300 1099 231 69 33 chr15 93823272 93823577 -9671397 - MTE2a LTR MaLR 0 379 64 4 1300 367 328 93 59 chr15 93823599 93823803 -9671171 - B4A SINE B4 -53 239 29 4 1300 373 348 96 60 chr15 93824500 93824833 -9670141 + ORR1E LTR MaLR 5 349 -10 4 1300 243 276 0 0 chr15 93825687 93825774 -9669200 + (CATATA)n Simple_repeat Simple_repeat 2 88 0 4 1300 553 237 0 12 chr15 93825786 93825957 -9669017 + (TA)n Simple_repeat Simple_repeat 1 169 0 4 1300 423 0 0 0 chr15 93825957 93826004 -9668970 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1300 633 300 126 15 chr15 93826623 93827019 -9667955 - L1MA5 LINE L1 -6 6294 5855 4 1300 240 35 0 0 chr15 93827454 93827483 -9667491 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1300 405 0 0 0 chr15 93827489 93827534 -9667440 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 1300 234 295 139 37 chr15 93828648 93828863 -9666111 + MLT1J-int LTR MaLR 507 743 -644 4 1300 242 370 30 10 chr15 93828910 93829011 -9665963 + MLT1J-int LTR MaLR 839 941 -446 4 1300 236 346 36 45 chr15 93829019 93829131 -9665843 - MLT2B1 LTR ERVL -65 502 392 4 1300 292 264 0 12 chr15 93829370 93829453 -9665521 - L1M3 LINE L1 -2279 3861 3777 4 1300 402 21 0 0 chr15 93829469 93829516 -9665458 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 1300 273 298 142 6 chr15 93829733 93829895 -9665079 - L1M3 LINE L1 -2383 3763 3580 4 1300 599 309 7 19 chr15 93829970 93830125 -9664849 - RSINE1 SINE B4 -8 157 5 4 1300 530 268 70 62 chr15 93830155 93830468 -9664506 - L1M3 LINE L1 -2600 3540 3239 4 1300 630 0 0 0 chr15 93830468 93830538 -9664436 + (TTTC)n Simple_repeat Simple_repeat 4 73 0 4 1300 530 266 102 76 chr15 93830538 93830921 -9664053 - L1M3 LINE L1 -2906 3240 2833 4 1300 201 39 0 0 chr15 93830926 93830952 -9664022 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 4 1300 415 267 17 86 chr15 93838071 93838247 -9656727 + L2c LINE L2 3175 3371 -16 4 1300 695 217 4 0 chr15 93838996 93839247 -9655727 + (TA)n Simple_repeat Simple_repeat 1 252 0 4 1300 2289 226 17 17 chr15 93839927 93840446 -9654528 + Lx7 LINE L1 6907 7425 -271 4 1300 304 264 14 0 chr15 93840766 93840838 -9654136 + ID4_ SINE ID 2 74 -9 4 1300 398 331 101 13 chr15 93840876 93841271 -9653703 + Charlie7 DNA MER1_type 295 724 -1888 4 1300 568 170 49 8 chr15 93841322 93841566 -9653408 + (TA)n Simple_repeat Simple_repeat 1 254 0 4 1300 843 154 3 3 chr15 93842988 93843667 -9651307 + (TCTG)n Simple_repeat Simple_repeat 1 679 0 4 1300 3515 57 77 0 chr15 93844144 93844585 -9650389 - MT2C_Mm LTR ERVL 0 475 1 4 1300 196 53 26 26 chr15 93844976 93845015 -9649959 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1300 9194 125 51 9 chr15 93845217 93847346 -9647628 - Lx2 LINE L1 -1 6996 4796 4 1301 1783 164 32 90 chr15 93849809 93849880 -9645094 - ORR1C1 LTR MaLR 0 378 325 4 1301 766 198 233 0 chr15 93849880 93850052 -9644922 - B3 SINE B2 -4 212 1 4 1301 1783 164 32 90 chr15 93850052 93850381 -9644593 - ORR1C1 LTR MaLR -54 324 1 4 1301 2679 150 0 12 chr15 93850408 93850832 -9644142 - MTC LTR MaLR -2 419 1 4 1301 780 169 88 17 chr15 93851417 93851598 -9643376 + B2_Mm2 SINE B2 2 195 0 4 1301 198 71 0 0 chr15 93851825 93851853 -9643121 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 4 1301 280 370 45 45 chr15 93852479 93852745 -9642229 + L2 LINE L2 2367 2632 -787 4 1301 507 304 7 4 chr15 93853536 93853817 -9641157 + (TG)n Simple_repeat Simple_repeat 1 282 0 4 1301 223 259 0 25 chr15 93853890 93854009 -9640965 + (TATG)n Simple_repeat Simple_repeat 4 119 0 4 1301 496 314 51 17 chr15 93854048 93854223 -9640751 - B4A SINE B4 -41 251 71 4 1301 1605 147 97 59 chr15 93854834 93855174 -9639800 + ORR1C1 LTR MaLR 1 353 -25 4 1301 291 362 116 28 chr15 93856686 93857004 -9637970 - L3b LINE CR1 -125 357 12 4 1301 449 17 17 0 chr15 93858005 93858063 -9636911 + (TG)n Simple_repeat Simple_repeat 1 59 0 4 1301 891 26 0 0 chr15 93858249 93858363 -9636611 + B1_Mus1 SINE Alu 35 148 0 4 1301 1016 16 8 0 chr15 93859235 93859357 -9635617 + (TCTA)n Simple_repeat Simple_repeat 4 126 0 4 1301 1235 267 75 9 chr15 93859491 93859824 -9635150 + MTE2b LTR MaLR 1 355 -24 4 1301 523 314 86 5 chr15 93859847 93860052 -9634922 - MLT2B1 LTR ERVL -70 450 218 5 1301 678 25 0 0 chr15 93860052 93860132 -9634842 + (TC)n Simple_repeat Simple_repeat 1 80 0 5 1301 292 337 114 45 chr15 93860132 93860255 -9634719 - MLT2B1 LTR ERVL -339 217 74 5 1301 7429 174 39 35 chr15 93860328 93861821 -9633153 - Lx5 LINE L1 -1 7049 5571 5 1301 531 285 79 24 chr15 93861833 93862085 -9632889 - ERVL-E-int LTR ERVL -68 5689 5424 5 1301 333 281 188 6 chr15 93862322 93862487 -9632487 - ERVL-E-int LTR ERVL -541 5173 4979 5 1301 272 164 0 32 chr15 93862572 93862635 -9632339 + (TATATG)n Simple_repeat Simple_repeat 2 62 0 5 1301 499 232 13 0 chr15 93862695 93862850 -9632124 + (TA)n Simple_repeat Simple_repeat 2 158 0 5 1301 396 0 0 0 chr15 93862851 93862895 -9632079 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1301 883 220 94 111 chr15 93862920 93863318 -9631656 - MT2A LTR ERVL -78 523 1 5 1301 2048 292 82 35 chr15 93863496 93864357 -9630617 - ERVL-E-int LTR ERVL -964 4703 3802 5 1301 453 271 30 8 chr15 93864450 93864584 -9630390 - ERVL-B4-int LTR ERVL -4087 1627 1491 5 1301 288 0 0 0 chr15 93864708 93864740 -9630234 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 1301 531 112 0 0 chr15 93864740 93864819 -9630155 + (CA)n Simple_repeat Simple_repeat 1 80 0 5 1301 778 243 81 90 chr15 93865241 93865562 -9629412 - ERVL-B4-int LTR ERVL -4550 1164 847 5 1301 33144 86 14 11 chr15 93865589 93871099 -9623875 + L1Md_F2 LINE L1 66 5584 -299 5 1301 7998 64 0 2 chr15 93871101 93872099 -9622875 + L1Md_F2 LINE L1 5587 6582 0 5 1301 2533 191 138 29 chr15 93872184 93872735 -9622239 - RMER19C LTR ERVK 0 611 1 5 1301 26 30 0 0 chr15 93872994 93873027 -9621947 + AT_rich Low_complexity Low_complexity 1 33 0 5 1301 351 0 0 0 chr15 93873801 93873840 -9621134 + (TC)n Simple_repeat Simple_repeat 2 40 0 5 1301 243 0 0 0 chr15 93873931 93873958 -9621016 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 5 1301 335 242 57 57 chr15 93873958 93874063 -9620911 - MTE-int LTR MaLR -316 1264 1160 5 1301 258 400 14 51 chr15 93874202 93874418 -9620556 - MTE-int LTR MaLR -522 1058 851 5 1301 228 301 98 43 chr15 93875119 93875282 -9619692 - MTE-int LTR MaLR -773 807 636 5 1301 773 320 34 22 chr15 93875450 93875859 -9619115 - MTE-int LTR MaLR -1165 415 2 5 1301 920 233 5 14 chr15 93876105 93876318 -9618656 - B3 SINE B2 -3 213 3 5 1301 383 294 53 24 chr15 93876588 93876797 -9618177 - Tigger13a DNA MER2_type -428 343 129 5 1301 822 244 69 10 chr15 93876928 93877131 -9617843 + B3 SINE B2 1 215 -1 5 1301 2848 212 44 20 chr15 93877495 93878106 -9616868 + Lx7 LINE L1 5986 6611 -1085 5 1301 483 198 49 8 chr15 93878106 93878247 -9616727 + Lx7 LINE L1 7565 7694 -2 5 1301 1621 157 51 3 chr15 93878281 93878575 -9616399 - Lx3C LINE L1 -2 6974 6667 5 1301 327 252 217 18 chr15 93879548 93879714 -9615260 - Lx8 LINE L1 -2 7471 7273 5 1301 2138 127 21 52 chr15 93881132 93881555 -9613419 + RMER17C LTR ERVK 1 410 0 5 1301 642 285 178 34 chr15 93884663 93885164 -9609810 + L1MB5 LINE L1 2212 2784 -3362 5 1301 889 230 46 4 chr15 93886782 93887017 -9607957 + MTD LTR MaLR 180 421 0 5 1301 273 240 142 57 chr15 93887038 93887250 -9607724 + L1MB5 LINE L1 5647 5876 -308 5 1301 1280 201 146 67 chr15 93887250 93887592 -9607382 - ORR1C1 LTR MaLR 0 378 10 5 1301 367 285 44 33 chr15 93887605 93887873 -9607101 + L1MB5 LINE L1 5876 6146 -32 5 1301 2285 119 50 45 chr15 93887876 93888341 -9606633 + IAPLTR2_Mm LTR ERVK 1 467 -8 5 1301 5307 53 0 31 chr15 93888342 93889025 -9605949 + IAPEz-int LTR ERVK 1 662 -5819 5 1301 454 66 0 32 chr15 93889025 93889088 -9605886 + IAPEz-int LTR ERVK 1359 1419 -5062 5 1301 1827 119 4 4 chr15 93889077 93889339 -9605635 + IAPEz-int LTR ERVK 2236 2497 -5183 5 1301 953 80 24 0 chr15 93889334 93889459 -9605515 + IAPEz-int LTR ERVK 4783 4910 -2770 5 1301 26770 16 4 0 chr15 93889459 93892405 -9602569 + IAPEz-int LTR ERVK 3525 6481 0 5 1301 2283 119 50 45 chr15 93892405 93892870 -9602104 + IAPLTR2_Mm LTR ERVK 1 467 -8 5 1301 463 292 0 32 chr15 93892935 93893059 -9601915 + RSINE1 SINE B4 11 130 -35 5 1301 433 256 25 0 chr15 93894091 93894212 -9600762 + L1_Mur3 LINE L1 4031 4154 -1726 5 1301 234 293 102 60 chr15 93894213 93894380 -9600594 + L1_Rod LINE L1 4289 4462 -1385 5 1301 1229 51 57 0 chr15 93894381 93894558 -9600416 + B2_Mm2 SINE B2 1 187 -8 5 1301 776 278 11 25 chr15 93894577 93894854 -9600120 + L1M2 LINE L1 4519 4791 -1352 5 1301 250 216 66 26 chr15 93895341 93895417 -9599557 - MTD LTR MaLR -14 407 329 5 1301 476 230 7 86 chr15 93895395 93895547 -9599427 - MTD LTR MaLR -267 152 13 5 1301 462 213 32 0 chr15 93895902 93895996 -9598978 - RMER17C-int LTR ERVK -141 3097 3001 5 1301 338 194 0 16 chr15 93895996 93896059 -9598915 - RLTR23 LTR ERV1 0 430 369 5 1301 360 0 0 0 chr15 93896097 93896137 -9598837 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 5 1301 2017 146 70 39 chr15 93896156 93896542 -9598432 + RMER10B LTR ERVL 1 398 0 5 1301 259 179 0 82 chr15 93896542 93896606 -9598368 + Lx8 LINE L1 7217 7276 -197 5 1301 633 206 27 107 chr15 93896606 93896803 -9598171 + RMER1C Other Other 1103 1342 0 5 1301 32 26 0 0 chr15 93897338 93897377 -9597597 + AT_rich Low_complexity Low_complexity 1 39 0 5 1301 253 352 71 14 chr15 93897987 93898128 -9596846 - MLT1H1 LTR MaLR -2 553 405 5 1301 362 268 181 75 chr15 93900769 93900859 -9594115 + RSINE1 SINE B4 13 123 -42 5 1301 1882 132 116 9 chr15 93900859 93901187 -9593787 + ORR1B2 LTR MaLR 1 363 -4 5 1301 362 268 181 75 chr15 93901187 93901229 -9593745 + RSINE1 SINE B4 124 159 -6 5 1301 410 0 20 0 chr15 93901234 93901284 -9593690 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1301 1341 264 15 6 chr15 93902300 93902643 -9592331 - ORR1D2 LTR MaLR 0 370 25 5 1301 375 23 0 0 chr15 93903940 93903984 -9590990 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1301 541 278 0 0 chr15 93903984 93904099 -9590875 - B3 SINE B2 -30 186 72 5 1301 526 248 0 9 chr15 93904097 93904207 -9590767 - B3 SINE B2 -103 113 5 5 1301 297 333 62 17 chr15 93906423 93906600 -9588374 + L2 LINE L2 2530 2714 -705 5 1301 527 290 109 29 chr15 93907176 93907350 -9587624 - ID_B1 SINE B4 -8 216 29 5 1301 408 71 0 0 chr15 93908035 93908091 -9586883 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1301 427 345 160 66 chr15 93908301 93908788 -9586186 - MLT1G LTR MaLR -39 552 20 5 1301 235 198 33 55 chr15 93908986 93909077 -9585897 - MTEb LTR MaLR -15 364 276 5 1301 588 216 115 24 chr15 93909845 93910054 -9584920 - MER5C DNA MER1_type -82 231 4 5 1301 305 271 66 52 chr15 93910872 93911008 -9583966 - MER5B DNA MER1_type -38 140 3 5 1301 1563 200 112 58 chr15 93911360 93911912 -9583062 - Lx7 LINE L1 -1 7695 7114 5 1301 328 300 60 64 chr15 93911963 93912212 -9582762 + L1MA7 LINE L1 5911 6158 -133 5 1301 2651 65 98 19 chr15 93912234 93912611 -9582363 + MTB_Mm LTR MaLR 1 407 0 5 1301 24 0 0 0 chr15 93913302 93913326 -9581648 + AT_rich Low_complexity Low_complexity 1 24 0 5 1301 285 98 0 0 chr15 93913817 93913858 -9581116 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1301 1563 258 56 45 chr15 93914085 93914660 -9580314 + Lx6 LINE L1 6486 7434 -26 5 1301 760 180 6 17 chr15 93914897 93915078 -9579896 + CT-rich Low_complexity Low_complexity 2 180 0 5 1301 229 278 0 67 chr15 93915655 93915848 -9579126 + GA-rich Low_complexity Low_complexity 1 180 0 5 1301 278 235 0 68 chr15 93915812 93916004 -9578970 + (TGAA)n Simple_repeat Simple_repeat 2 180 0 5 1301 230 197 55 27 chr15 93916378 93916451 -9578523 + MTEb LTR MaLR 288 362 -17 5 1301 555 277 31 25 chr15 93916585 93916748 -9578226 + RSINE1 SINE B4 1 164 -1 5 1301 340 317 67 35 chr15 93917365 93917620 -9577354 - MIR SINE MIR -1 267 5 5 1301 503 266 43 14 chr15 93918248 93918389 -9576585 + RSINE1 SINE B4 14 158 -7 5 1301 1861 128 76 3 chr15 93918553 93918882 -9576092 + RMER6D LTR ERVK 1 353 -367 5 1301 543 206 0 0 chr15 93918885 93919975 -9574999 + (TG)n Simple_repeat Simple_repeat 1 1090 0 5 1301 3368 143 26 7 chr15 93920008 93920592 -9574382 + RLTR17 LTR ERVK 98 692 0 5 1301 906 135 38 13 chr15 93920599 93920757 -9574217 + RMER6D LTR ERVK 362 523 -197 5 1301 459 0 0 0 chr15 93920757 93920808 -9574166 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1301 3380 199 99 48 chr15 93921209 93922013 -9572961 + Lx7 LINE L1 6781 7623 -73 5 1301 308 64 21 0 chr15 93922013 93922060 -9572914 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1301 3380 199 99 48 chr15 93922060 93922111 -9572863 + Lx7 LINE L1 7624 7679 -17 5 1301 461 221 128 25 chr15 93922419 93922663 -9572311 - L1MA4 LINE L1 -379 5921 5599 5 1301 305 322 117 34 chr15 93922665 93922929 -9572045 - L1MEc LINE L1 -760 5559 5274 5 1301 308 155 0 17 chr15 93922929 93922988 -9571986 - B2_Mm2 SINE B2 -87 108 51 5 1301 309 331 78 16 chr15 93923239 93923432 -9571542 - L1MEc LINE L1 -5492 908 704 5 1301 378 0 0 0 chr15 93923600 93923642 -9571332 + (TATG)n Simple_repeat Simple_repeat 2 43 0 5 1301 1381 138 4 39 chr15 93924642 93924875 -9570099 + URR1B DNA MER1_type 1 225 0 5 1301 613 308 91 64 chr15 93925574 93925927 -9569047 + MER34A LTR ERV1 28 395 -176 5 1301 900 217 82 0 chr15 93925927 93926134 -9568840 - URR1B DNA MER1_type 0 225 2 5 1301 613 308 91 64 chr15 93926134 93926252 -9568722 + MER34A LTR ERV1 396 511 -60 5 1301 549 0 0 0 chr15 93927053 93927114 -9567860 + (TC)n Simple_repeat Simple_repeat 2 62 0 5 1301 270 240 41 16 chr15 93927231 93927312 -9567662 + MTEa LTR MaLR 281 361 -18 5 1301 2052 113 15 6 chr15 93928659 93928988 -9565986 + IAPLTR1a_Mm LTR ERVK 1 332 -5 5 1301 280 53 0 0 chr15 93928992 93929030 -9565944 + IAPEz-int LTR ERVK 3 40 -1947 5 1301 3650 80 19 31 chr15 93929030 93929854 -9565120 + IAPEz-int LTR ERVK 10 662 -5819 5 1301 2262 68 0 0 chr15 93929854 93930132 -9564842 + IAPEz-int LTR ERVK 1359 1636 -4845 5 1301 6141 48 3 21 chr15 93930131 93930891 -9564083 + IAPEz-int LTR ERVK 5736 6481 0 5 1301 2040 116 15 6 chr15 93930891 93931220 -9563754 + IAPLTR1a_Mm LTR ERVK 1 332 -5 5 1301 4659 112 18 8 chr15 93932206 93932936 -9562038 + RMER19A LTR ERVK 1 737 0 5 1301 239 301 0 0 chr15 93933052 93933125 -9561849 + tRNA-Ala-GCY_ tRNA tRNA 3 75 0 5 1301 396 243 11 0 chr15 93934273 93934561 -9560413 + GA-rich Low_complexity Low_complexity 1 291 0 5 1301 445 204 21 0 chr15 93935171 93935264 -9559710 - RSINE1 SINE B4 -68 97 3 5 1301 439 330 133 10 chr15 93935390 93935870 -9559104 - L2 LINE L2 -2414 1005 467 5 1301 1735 90 4 12 chr15 93935951 93936210 -9558764 + L1_Mus4 LINE L1 6376 6632 -4 5 1301 421 298 156 14 chr15 93936222 93936440 -9558534 + B4 SINE B4 24 272 -20 5 1301 342 0 0 0 chr15 93936440 93936478 -9558496 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1301 287 289 0 22 chr15 93936633 93936725 -9558249 + MER57-int LTR ERV1 7155 7244 -293 5 1301 702 241 43 24 chr15 93936916 93937124 -9557850 - B3 SINE B2 -4 212 1 5 1301 186 103 0 0 chr15 93937662 93937691 -9557283 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 1301 214 318 130 23 chr15 93937768 93937945 -9557029 + L2b LINE L2 3015 3210 -165 5 1301 1065 116 0 0 chr15 93938143 93938307 -9556667 + (TCTCCC)n Simple_repeat Simple_repeat 3 166 0 5 1301 223 329 66 0 chr15 93939717 93939793 -9555181 - ID4_ SINE ID 0 83 3 5 1301 270 0 0 0 chr15 93939822 93939852 -9555122 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 6 1301 270 0 0 0 chr15 93939852 93939882 -9555092 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 1301 411 240 42 0 chr15 93939883 93939979 -9554995 + B1F2 SINE Alu 41 140 -9 6 1301 303 321 161 36 chr15 93940259 93940427 -9554547 - ORR1E LTR MaLR -167 192 4 6 1301 405 167 0 0 chr15 93940444 93940522 -9554452 + (CA)n Simple_repeat Simple_repeat 1 78 0 6 1301 1740 165 130 19 chr15 93942403 93942565 -9552409 - MTC LTR MaLR -3 418 260 6 1301 1482 79 5 0 chr15 93942565 93942755 -9552219 + B2_Mm2 SINE B2 2 192 -3 6 1301 1740 165 130 19 chr15 93942755 93942968 -9552006 - MTC LTR MaLR -162 259 1 6 1301 4139 192 256 14 chr15 93942969 93943979 -9550995 - MTC-int LTR MaLR -2 1256 2 6 1301 2074 188 54 27 chr15 93943979 93944388 -9550586 - MTC LTR MaLR 0 421 1 6 1301 219 330 0 21 chr15 93945568 93945661 -9549313 + GA-rich Low_complexity Low_complexity 6 96 0 6 1301 6302 102 65 9 chr15 93945934 93946841 -9548133 - RMER17B LTR ERVK 0 958 1 6 1301 741 294 124 32 chr15 93947095 93947978 -9546996 - L1MB1 LINE L1 -15 6156 5145 6 1301 260 0 57 0 chr15 93948001 93948036 -9546938 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 6 1301 788 62 0 0 chr15 93948038 93948135 -9546839 - B1_Mus2 SINE Alu -13 134 38 6 1301 334 326 0 48 chr15 93948060 93948163 -9546811 - MT2B LTR ERVL -337 264 167 6 1301 40132 30 1 1 chr15 93948673 93954785 -9540189 - L1Md_T LINE L1 0 6582 469 6 1301 330 271 100 67 chr15 93955513 93955663 -9539311 + RMER15 LTR ERVL 3 157 -418 6 1301 585 302 81 78 chr15 93955660 93955944 -9539030 + RMER15 LTR ERVL 273 557 -18 6 1301 1855 167 127 0 chr15 93956017 93956340 -9538634 + ORR1B2 LTR MaLR 3 366 -1 6 1301 186 150 0 0 chr15 93956934 93956974 -9538000 + (A)n Simple_repeat Simple_repeat 1 40 0 6 1301 1856 184 27 27 chr15 93956979 93957348 -9537626 - ORR1C2 LTR MaLR -2 382 14 6 1301 753 173 31 12 chr15 93957444 93957703 -9537271 + (CATA)n Simple_repeat Simple_repeat 1 264 0 6 1301 244 217 60 12 chr15 93958052 93958136 -9536838 + L1ME2z LINE L1 1468 1555 -4687 6 1301 333 231 70 86 chr15 93958350 93958478 -9536496 + B4A SINE B4 2 127 -165 6 1301 707 238 3 0 chr15 93958510 93958870 -9536104 + (CA)n Simple_repeat Simple_repeat 1 361 0 6 1301 885 320 136 43 chr15 93959609 93960188 -9534786 + L1ME2z LINE L1 2435 3059 -3087 6 1301 1040 45 8 0 chr15 93960188 93960322 -9534652 + (GAAAA)n Simple_repeat Simple_repeat 5 139 0 6 1301 885 320 136 43 chr15 93960322 93960930 -9534044 + L1ME2z LINE L1 3060 3732 -2414 6 1301 812 196 6 23 chr15 93961023 93961195 -9533779 + Lx6 LINE L1 7266 7434 -26 6 1301 228 149 0 0 chr15 93961489 93961536 -9533438 + (GA)n Simple_repeat Simple_repeat 1 47 0 6 1301 920 209 137 54 chr15 93961536 93961914 -9533060 - MT2A LTR ERVL -71 462 1 6 1301 249 159 0 0 chr15 93962048 93962092 -9532882 + CT-rich Low_complexity Low_complexity 3 46 0 6 1301 23 0 0 0 chr15 93962265 93962288 -9532686 + AT_rich Low_complexity Low_complexity 1 23 0 6 1301 1939 142 153 6 chr15 93962513 93962833 -9532141 - ORR1B2 LTR MaLR 0 367 1 6 1301 720 240 144 11 chr15 93962835 93963016 -9531958 + B3 SINE B2 1 205 -11 6 1301 718 223 0 65 chr15 93963042 93963061 -9531913 + RSINE1 SINE B4 2 18 -147 6 1301 2671 144 10 3 chr15 93963061 93963450 -9531524 + ORR1B1 LTR MaLR 3 394 0 6 1301 718 223 0 65 chr15 93963450 93963569 -9531405 + RSINE1 SINE B4 19 131 -34 6 1301 432 51 0 0 chr15 93963583 93963642 -9531332 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 1301 226 254 15 0 chr15 93963691 93963758 -9531216 + L1ME2z LINE L1 5366 5433 -745 6 1301 8333 73 7 0 chr15 93963767 93965561 -9529413 + L1_Mus1 LINE L1 4759 6567 0 6 1301 224 73 0 68 chr15 93965566 93965610 -9529364 + (TAAAAA)n Simple_repeat Simple_repeat 2 42 0 6 1301 335 296 89 54 chr15 93965672 93965840 -9529134 + MLT1A LTR MaLR 20 193 -181 6 1301 270 294 35 0 chr15 93966039 93966124 -9528850 + L1ME2z LINE L1 5567 5654 -510 6 1301 287 274 115 64 chr15 93966152 93966562 -9528412 + L1ME2z LINE L1 5713 6145 -19 6 1301 1226 189 13 22 chr15 93967296 93967523 -9527451 - URR1B DNA MER1_type 0 225 1 6 1301 22 56 0 0 chr15 93970449 93970485 -9524489 + AT_rich Low_complexity Low_complexity 1 36 0 6 1301 23 33 0 0 chr15 93970586 93970616 -9524358 + AT_rich Low_complexity Low_complexity 1 30 0 6 1301 976 123 6 12 chr15 93970852 93971024 -9523950 + L1_Mus4 LINE L1 6460 6630 -6 6 1301 1165 271 124 16 chr15 93971205 93971569 -9523405 + MTD LTR MaLR 5 407 -12 6 1301 2307 193 7 7 chr15 93971745 93972157 -9522817 + MTC LTR MaLR 10 421 0 6 1301 526 248 5 0 chr15 93972312 93972451 -9522523 - B1F SINE Alu -9 140 7 6 1301 225 238 16 16 chr15 93973264 93973328 -9521646 + B3 SINE B2 153 216 0 6 1301 421 291 70 7 chr15 93975080 93975222 -9519752 - ID_B1 SINE B4 -54 170 20 6 1301 236 279 0 68 chr15 93975370 93975443 -9519531 + ID4 SINE ID 12 79 -4 6 1301 28 48 0 0 chr15 93976202 93976244 -9518730 + AT_rich Low_complexity Low_complexity 1 42 0 6 1301 1108 194 30 0 chr15 93976909 93977110 -9517864 - B3 SINE B2 -7 209 3 6 1301 387 0 0 0 chr15 93977626 93977669 -9517305 + (TC)n Simple_repeat Simple_repeat 2 44 0 6 1301 276 322 103 50 chr15 93977718 93977769 -9517205 - Lx9 LINE L1 -78 7566 7516 6 1301 297 0 0 0 chr15 93977769 93977802 -9517172 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1301 276 322 103 50 chr15 93977802 93978051 -9516923 - Lx9 LINE L1 -129 7515 7250 6 1302 1078 84 77 135 chr15 93980172 93980379 -9514595 - B2_Mm2 SINE B2 0 195 1 6 1302 38765 31 0 0 chr15 93980895 93987306 -9507668 - L1Md_T LINE L1 0 6585 78 6 1302 229 253 175 12 chr15 93987894 93987974 -9507000 - B4A SINE B4 -198 94 2 6 1302 1230 56 7 0 chr15 93988316 93988460 -9506514 + B1_Mus2 SINE Alu 1 145 -2 6 1302 374 179 11 77 chr15 93990580 93990671 -9504303 - RSINE1 SINE B4 -29 136 52 6 1302 486 0 0 0 chr15 93990912 93990966 -9504008 + (GA)n Simple_repeat Simple_repeat 2 55 0 6 1302 572 184 299 0 chr15 93990979 93991126 -9503848 + URR1B DNA MER1_type 35 225 0 6 1302 304 199 16 8 chr15 93991956 93991991 -9502983 + (TCTA)n Simple_repeat Simple_repeat 2 35 0 6 1302 228 35 0 0 chr15 93991991 93992020 -9502954 + (TGGA)n Simple_repeat Simple_repeat 4 32 0 6 1302 304 199 16 8 chr15 93992020 93992111 -9502863 + (TCTA)n Simple_repeat Simple_repeat 1 93 0 6 1302 531 294 13 32 chr15 93992121 93992279 -9502695 - RSINE1 SINE B4 -2 163 9 6 1302 807 142 0 0 chr15 93992299 93992433 -9502541 + (GGAA)n Simple_repeat Simple_repeat 3 136 0 6 1302 639 324 99 37 chr15 93994209 93994613 -9500361 - MER89 LTR ERV1 -30 529 101 6 1302 2211 167 66 20 chr15 93994629 93995470 -9499504 - RMER6A LTR ERVK -2 754 3 6 1302 520 327 43 82 chr15 93995504 93995807 -9499167 - B4A SINE B4 0 292 2 6 1302 334 250 83 33 chr15 93996178 93996298 -9498676 + B1_Mur4 SINE Alu 22 147 -3 6 1302 432 0 0 0 chr15 93996328 93996376 -9498598 + (GA)n Simple_repeat Simple_repeat 2 49 0 6 1302 234 105 0 0 chr15 93997780 93997818 -9497156 + (CAGAGA)n Simple_repeat Simple_repeat 2 39 0 6 1302 222 242 31 31 chr15 93998395 93998493 -9496481 + (CCA)n Simple_repeat Simple_repeat 1 98 0 6 1302 679 295 180 52 chr15 93999219 93999937 -9495037 + L1M2 LINE L1 1857 2711 -3838 6 1302 384 306 92 39 chr15 94000090 94000416 -9494558 + L1_Mur3 LINE L1 2206 2551 -3296 1 1302 1184 318 38 34 chr15 94000435 94000935 -9494039 + L1_Mur3 LINE L1 3843 4352 -1528 1 1302 531 0 0 0 chr15 94000935 94000994 -9493980 + (GGAA)n Simple_repeat Simple_repeat 1 59 0 2 1302 1235 78 0 11 chr15 94000995 94001177 -9493797 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1302 1184 318 38 34 chr15 94001177 94001286 -9493688 + L1_Mur3 LINE L1 4353 4456 -1424 1 1302 322 237 95 13 chr15 94001266 94001424 -9493550 + L1MA4 LINE L1 5317 5487 -813 4 1302 404 272 47 7 chr15 94001495 94001667 -9493307 + L1MA4 LINE L1 5766 5937 -363 4 1302 276 258 11 21 chr15 94001668 94001763 -9493211 + (TA)n Simple_repeat Simple_repeat 2 95 0 5 1302 1716 206 178 75 chr15 94002078 94002561 -9492413 + MT2A LTR ERVL 1 533 0 6 1302 1046 78 35 7 chr15 94002864 94003006 -9491968 + B1_Mm SINE Alu 1 146 -1 7 1302 1329 237 64 39 chr15 94003373 94003457 -9491517 - ORR1D2 LTR MaLR 0 370 292 8 1302 1806 159 103 21 chr15 94003457 94003836 -9491138 + RMER17C LTR ERVK 1 410 0 9 1302 1329 237 64 39 chr15 94003836 94004111 -9490863 - ORR1D2 LTR MaLR -79 291 2 8 1302 711 280 0 68 chr15 94004263 94004497 -9490477 - B4A SINE B4 -11 281 64 1 1302 265 256 23 47 chr15 94004736 94004822 -9490152 - L1MEd LINE L1 -5587 532 449 1 1302 275 338 58 20 chr15 94005352 94005566 -9489408 + L1MA5 LINE L1 5914 6138 -162 1 1302 1114 184 31 48 chr15 94005699 94005928 -9489046 + URR1B DNA MER1_type 1 225 0 1 1302 4365 149 38 23 chr15 94005994 94006734 -9488240 + Lx LINE L1 5904 6654 0 1 1302 23 0 0 0 chr15 94007056 94007079 -9487895 + AT_rich Low_complexity Low_complexity 1 23 0 1 1302 447 52 0 0 chr15 94007503 94007561 -9487413 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1302 363 219 14 7 chr15 94007561 94007699 -9487275 + (TA)n Simple_repeat Simple_repeat 2 140 0 1 1302 916 272 105 40 chr15 94008551 94008979 -9485995 - Lx7 LINE L1 -177 7519 7064 1 1302 257 114 95 0 chr15 94009882 94009987 -9484987 + (TA)n Simple_repeat Simple_repeat 1 115 0 1 1302 229 204 40 61 chr15 94009992 94010091 -9484883 + (TTATA)n Simple_repeat Simple_repeat 5 101 0 2 1302 4684 214 45 49 chr15 94010443 94010791 -9484183 - Lx7 LINE L1 0 7696 7376 2 1302 213 39 0 0 chr15 94010791 94010817 -9484157 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 2 1302 4684 214 45 49 chr15 94010817 94011600 -9483374 - Lx7 LINE L1 -321 7375 6569 2 1302 22 0 0 30 chr15 94013048 94013059 -9481915 + AT_rich Low_complexity Low_complexity 1 11 0 2 1302 1337 65 82 0 chr15 94013059 94013229 -9481745 - B2_Mm2 SINE B2 -10 185 2 2 1302 22 0 0 30 chr15 94013229 94013250 -9481724 + AT_rich Low_complexity Low_complexity 1 21 0 2 1302 772 191 202 28 chr15 94013558 94013736 -9481238 - B3 SINE B2 -7 209 1 2 1302 2261 131 101 0 chr15 94014551 94014909 -9480065 + ORR1B1 LTR MaLR 1 394 0 2 1302 240 318 18 18 chr15 94014964 94015073 -9479901 + (CATATA)n Simple_repeat Simple_repeat 3 111 0 2 1302 448 296 77 46 chr15 94015681 94015876 -9479098 - ERVL-E-int LTR ERVL -1005 4662 4462 2 1302 1824 249 33 62 chr15 94016239 94016542 -9478432 - RMER15 LTR ERVL -46 529 233 3 1302 1023 161 194 0 chr15 94016542 94016728 -9478246 + URR1A DNA MER1_type 5 226 0 3 1302 1824 249 33 62 chr15 94016728 94016941 -9478033 - RMER15 LTR ERVL -343 232 28 3 1302 220 271 0 0 chr15 94017068 94017116 -9477858 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1302 744 329 13 34 chr15 94017168 94017401 -9477573 - B4 SINE B4 -44 248 21 3 1302 2078 127 3 56 chr15 94018724 94019083 -9475891 - Lx2 LINE L1 0 6997 6658 3 1302 610 259 0 0 chr15 94019545 94019661 -9475313 - PB1D9 SINE Alu 0 120 5 3 1302 414 151 0 0 chr15 94021178 94021251 -9473723 + (TA)n Simple_repeat Simple_repeat 1 73 0 3 1302 272 310 30 44 chr15 94021271 94021406 -9473568 - L1MA6 LINE L1 -30 6270 6138 3 1302 230 279 0 56 chr15 94021908 94021980 -9472994 + MER34A LTR ERV1 71 138 -433 3 1302 455 269 0 9 chr15 94023759 94023868 -9471106 - PB1D10 SINE Alu -8 109 2 3 1302 647 216 50 0 chr15 94026677 94026816 -9468158 - B3 SINE B2 -70 146 1 4 1302 21 36 0 0 chr15 94027468 94027496 -9467478 + AT_rich Low_complexity Low_complexity 1 28 0 4 1302 411 322 88 88 chr15 94027725 94028021 -9466953 - Lx8 LINE L1 0 7473 7178 4 1302 583 258 123 5 chr15 94028072 94028275 -9466699 - B4A SINE B4 -63 229 3 4 1302 393 249 103 21 chr15 94029239 94029470 -9465504 + L1ME1 LINE L1 3730 3977 -2169 4 1302 329 206 15 0 chr15 94029517 94029585 -9465389 + B3A SINE B2 2 70 -128 4 1302 43 20 0 0 chr15 94029621 94029671 -9465303 + AT_rich Low_complexity Low_complexity 1 50 0 4 1302 348 313 35 40 chr15 94029876 94030102 -9464872 + L1ME1 LINE L1 4942 5166 -980 4 1302 518 274 87 9 chr15 94030151 94030328 -9464646 - L1M5 LINE L1 -497 5667 5484 4 1302 226 212 76 0 chr15 94030323 94030389 -9464585 + L1MC LINE L1 5184 5254 -892 4 1302 237 304 25 34 chr15 94030471 94030590 -9464384 + L1ME1 LINE L1 5357 5474 -970 4 1302 306 355 47 47 chr15 94030946 94031138 -9463836 + L1ME1 LINE L1 5970 6161 -18 4 1302 206 269 0 0 chr15 94031717 94031769 -9463205 + C-rich Low_complexity Low_complexity 1 52 0 4 1302 25 0 0 0 chr15 94032087 94032112 -9462862 + AT_rich Low_complexity Low_complexity 1 25 0 5 1302 344 281 49 20 chr15 94032129 94032270 -9462704 - B4 SINE B4 -7 158 7 5 1302 303 256 0 0 chr15 94032270 94032360 -9462614 + (TATATG)n Simple_repeat Simple_repeat 3 92 0 5 1302 3108 27 0 121 chr15 94032546 94032961 -9462013 - RLTR10B2 LTR ERVK 0 365 1 5 1302 603 183 0 32 chr15 94033188 94033374 -9461600 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 1302 186 71 0 0 chr15 94034191 94034219 -9460755 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1302 21 36 0 0 chr15 94034682 94034710 -9460264 + AT_rich Low_complexity Low_complexity 1 28 0 5 1302 341 32 31 31 chr15 94035561 94035626 -9459348 + (CAAAA)n Simple_repeat Simple_repeat 2 66 0 5 1302 222 37 0 0 chr15 94035688 94035715 -9459259 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1302 609 208 50 69 chr15 94036313 94036473 -9458501 - B3A SINE B2 -1 197 41 5 1302 335 343 9 0 chr15 94036865 94036970 -9458004 + MIR SINE MIR 66 171 -91 6 1302 359 299 116 7 chr15 94038095 94038233 -9456741 - MER74B LTR ERVL -375 247 95 6 1302 198 309 189 28 chr15 94038338 94038481 -9456493 - MER5B DNA MER1_type -1 177 12 6 1302 1459 222 98 11 chr15 94039161 94039529 -9455445 - MTD LTR MaLR -14 405 6 6 1302 553 317 26 36 chr15 94039711 94039904 -9455070 + MLT1K LTR MaLR 383 573 -22 6 1302 2222 299 96 29 chr15 94040162 94041089 -9453885 - Lx8 LINE L1 -92 7381 6393 6 1302 691 348 48 45 chr15 94041348 94041616 -9453358 - MTEb LTR MaLR -65 314 46 6 1302 1990 298 69 19 chr15 94041612 94042238 -9452736 - MTEb-int LTR MaLR -923 657 1 6 1302 902 293 50 53 chr15 94042238 94042269 -9452705 - MTEb LTR MaLR 0 379 348 6 1302 441 0 0 0 chr15 94042269 94042318 -9452656 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 6 1302 902 293 50 53 chr15 94042318 94042664 -9452310 - MTEb LTR MaLR -32 347 4 6 1302 645 218 8 8 chr15 94042793 94042918 -9452056 - B3 SINE B2 -90 126 2 6 1302 180 111 0 0 chr15 94045092 94045119 -9449855 + (CTG)n Simple_repeat Simple_repeat 3 29 0 7 1302 249 108 0 0 chr15 94045466 94045503 -9449471 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1302 1122 91 0 0 chr15 94045568 94045711 -9449263 - B1_Mus1 SINE Alu -5 143 1 7 1302 3454 50 2 2 chr15 94046576 94046976 -9447998 - MTB LTR MaLR 0 400 1 7 1302 22 0 0 0 chr15 94047163 94047185 -9447789 + AT_rich Low_complexity Low_complexity 1 22 0 7 1302 4377 93 3 28 chr15 94047994 94048592 -9446382 + L1_Mus4 LINE L1 6054 6636 0 7 1302 845 130 0 6 chr15 94050074 94050237 -9444737 + (TA)n Simple_repeat Simple_repeat 2 163 0 7 1302 198 0 0 0 chr15 94050237 94050259 -9444715 + (GA)n Simple_repeat Simple_repeat 2 23 0 7 1302 614 32 43 0 chr15 94050263 94050356 -9444618 + (CA)n Simple_repeat Simple_repeat 2 98 0 7 1302 653 128 23 23 chr15 94052532 94052751 -9442223 + (CA)n Simple_repeat Simple_repeat 1 219 0 7 1302 239 267 0 26 chr15 94052754 94052831 -9442143 + (CATA)n Simple_repeat Simple_repeat 1 75 0 8 1302 718 148 23 6 chr15 94052831 94053008 -9441966 + (CA)n Simple_repeat Simple_repeat 1 180 0 8 1302 427 74 14 14 chr15 94053014 94053083 -9441891 + (CATA)n Simple_repeat Simple_repeat 4 72 0 8 1302 797 184 0 26 chr15 94054722 94054873 -9440101 - RMER15 LTR ERVL 0 575 429 8 1302 1140 169 136 0 chr15 94054902 94055115 -9439859 - ORR1B1 LTR MaLR -152 242 1 8 1302 1372 236 82 21 chr15 94055115 94055230 -9439744 - RMER15 LTR ERVL -177 398 276 8 1302 1357 200 73 81 chr15 94055230 94055611 -9439363 - ORR1C1 LTR MaLR 0 378 1 8 1302 1372 236 82 21 chr15 94055611 94055870 -9439104 - RMER15 LTR ERVL -300 275 2 8 1302 923 227 181 31 chr15 94055870 94056291 -9438683 - RMER15-int LTR ERVL -26 4973 4490 8 1302 2751 215 60 19 chr15 94056282 94056917 -9438057 - RMER15-int LTR ERVL -3657 1342 686 8 1302 2184 258 72 26 chr15 94056931 94057541 -9437433 - RMER15-int LTR ERVL -4361 638 1 8 1302 288 170 0 0 chr15 94057541 94057588 -9437386 - RMER15 LTR ERVL 0 575 529 8 1302 944 167 12 0 chr15 94057603 94057765 -9437209 - ORR1B2 LTR MaLR -8 359 196 8 1302 497 167 0 0 chr15 94057772 94057862 -9437112 - ORR1B2 LTR MaLR -277 90 1 8 1302 1147 195 64 19 chr15 94057862 94058299 -9436675 - RMER15 LTR ERVL -62 513 1 8 1302 239 311 27 36 chr15 94058772 94058882 -9436092 - PB1D10 SINE Alu 0 117 9 8 1302 31 0 0 0 chr15 94059256 94059287 -9435687 + AT_rich Low_complexity Low_complexity 1 31 0 8 1302 368 289 40 60 chr15 94059287 94059438 -9435536 + RSINE1 SINE B4 18 165 0 8 1302 245 209 18 41 chr15 94059495 94059665 -9435309 + (CA)n Simple_repeat Simple_repeat 1 166 0 9 1302 450 322 53 0 chr15 94060319 94060471 -9434503 - LTR31 LTR ERV1 -291 328 169 9 1302 372 317 38 32 chr15 94060558 94060744 -9434230 + ORR1E LTR MaLR 6 192 -167 9 1302 259 317 33 8 chr15 94060783 94060904 -9434070 + ORR1E LTR MaLR 256 379 0 9 1302 454 260 277 0 chr15 94063319 94063561 -9431413 + MER57C2 LTR ERV1 8 316 -118 9 1302 212 355 50 51 chr15 94064743 94065249 -9429725 + L2a LINE L2 2849 3349 -77 9 1302 539 194 20 0 chr15 94066241 94066339 -9428635 - B3A SINE B2 -95 103 4 9 1302 1185 54 0 0 chr15 94066370 94066517 -9428457 - B1_Mm SINE Alu 0 147 1 9 1302 194 174 22 0 chr15 94066570 94066616 -9428358 + CT-rich Low_complexity Low_complexity 3 49 0 9 1302 524 296 95 8 chr15 94066741 94066993 -9427981 + MER90a LTR ERV1 97 370 -244 9 1302 588 270 29 0 chr15 94066994 94067182 -9427792 + B3 SINE B2 1 198 0 9 1302 321 26 0 0 chr15 94067688 94067726 -9427248 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 1 1302 337 306 87 21 chr15 94067869 94068137 -9426837 + B4 SINE B4 1 281 -11 1 1302 528 16 0 0 chr15 94068159 94068220 -9426754 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 1302 369 0 0 0 chr15 94069485 94069526 -9425448 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1302 1060 122 37 47 chr15 94070148 94070338 -9424636 + B2_Mm1t SINE B2 2 189 -4 1 1302 4357 69 9 7 chr15 94071063 94071633 -9423341 - L1_Mus4 LINE L1 -8 6628 6058 1 1302 21 0 0 0 chr15 94071791 94071812 -9423162 + AT_rich Low_complexity Low_complexity 1 21 0 1 1302 315 309 31 67 chr15 94072896 94073090 -9421884 + RLTR23 LTR ERV1 244 430 0 1 1302 1340 251 35 30 chr15 94073091 94073457 -9421517 - ORR1D2 LTR MaLR -2 368 1 1 1302 252 0 0 0 chr15 94073518 94073546 -9421428 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1302 414 0 0 0 chr15 94074720 94074766 -9420208 + (TTTCC)n Simple_repeat Simple_repeat 3 48 0 1 1302 690 13 0 0 chr15 94074770 94074849 -9420125 + (TC)n Simple_repeat Simple_repeat 2 80 0 1 1302 490 272 0 31 chr15 94075602 94075731 -9419243 - B3A SINE B2 -73 125 1 1 1302 258 138 0 0 chr15 94076018 94076076 -9418898 + (TC)n Simple_repeat Simple_repeat 1 58 0 1 1302 22 0 0 0 chr15 94077421 94077443 -9417531 + AT_rich Low_complexity Low_complexity 1 22 0 1 1302 411 331 70 67 chr15 94077836 94078121 -9416853 - B4A SINE B4 -5 287 2 1 1302 269 350 57 8 chr15 94079956 94080080 -9414894 + B1F1 SINE Alu 3 132 -17 1 1302 187 31 30 30 chr15 94080975 94081008 -9413966 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1 1302 244 222 0 0 chr15 94081025 94081070 -9413904 - B2_Mm2 SINE B2 -143 52 8 1 1302 529 319 84 48 chr15 94081382 94081737 -9413237 - MER47B DNA MER2_type -4 414 47 1 1302 243 298 12 0 chr15 94081793 94081877 -9413097 + L1ME2 LINE L1 6064 6148 -16 1 1302 223 182 23 0 chr15 94083204 94083248 -9411726 + CT-rich Low_complexity Low_complexity 2 46 0 1 1302 732 281 123 46 chr15 94083416 94083897 -9411077 + Charlie1b DNA MER1_type 2 519 -4 1 1302 253 47 47 0 chr15 94084097 94084140 -9410834 + (CAAAAA)n Simple_repeat Simple_repeat 2 46 0 1 1302 228 312 83 33 chr15 94084896 94085090 -9409884 + MIRb SINE MIR 26 230 -38 1 1302 22 0 0 0 chr15 94085998 94086020 -9408954 + AT_rich Low_complexity Low_complexity 1 22 0 1 1302 648 278 19 67 chr15 94087197 94087231 -9407743 - B3A SINE B2 0 198 171 1 1302 420 20 0 0 chr15 94087231 94087280 -9407694 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 1302 297 0 0 0 chr15 94087285 94087318 -9407656 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 1 1302 648 278 19 67 chr15 94087318 94087485 -9407489 - B3A SINE B2 -28 170 1 1 1302 519 304 55 44 chr15 94087869 94088162 -9406812 - MT2A LTR ERVL -160 373 78 1 1302 315 318 101 0 chr15 94088094 94088223 -9406751 - MTE2a LTR MaLR -231 148 7 1 1302 34 0 0 0 chr15 94089088 94089122 -9405852 + AT_rich Low_complexity Low_complexity 1 34 0 1 1302 1221 308 85 102 chr15 94089843 94090395 -9404579 - Lx8 LINE L1 -607 6866 6327 1 1302 874 196 7 0 chr15 94090395 94090538 -9404436 - B1_Mus1 SINE Alu -2 146 3 1 1302 1221 308 85 102 chr15 94090538 94090675 -9404299 - Lx8 LINE L1 -1147 6326 6215 1 1302 1374 216 78 33 chr15 94090675 94091034 -9403940 + ORR1C1 LTR MaLR 2 376 -2 1 1302 1221 308 85 102 chr15 94091034 94091189 -9403785 - Lx8 LINE L1 -1259 6214 6035 1 1302 1066 120 0 42 chr15 94091199 94091336 -9403638 + B2_Mm2 SINE B2 8 144 -51 1 1302 492 48 0 0 chr15 94091336 94091399 -9403575 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 1302 1066 120 0 42 chr15 94091399 94091453 -9403521 + B2_Mm2 SINE B2 145 191 -4 1 1302 982 269 73 35 chr15 94091553 94091944 -9403030 - Lx8 LINE L1 -1740 5956 5551 1 1302 1848 108 0 0 chr15 94091945 94092214 -9402760 + ORR1A2 LTR MaLR 1 269 -58 1 1302 1195 70 41 0 chr15 94092214 94092386 -9402588 + B2_Mm2 SINE B2 11 189 -6 1 1302 485 62 0 0 chr15 94092386 94092451 -9402523 + ORR1A2 LTR MaLR 263 327 0 1 1302 544 236 118 36 chr15 94092455 94092695 -9402279 - Lx8 LINE L1 -731 5572 5317 1 1302 187 125 0 59 chr15 94092801 94092852 -9402122 + T-rich Low_complexity Low_complexity 2 49 0 1 1302 652 340 32 42 chr15 94092867 94093180 -9401794 + MTE2b LTR MaLR 1 310 -69 1 1302 638 134 18 0 chr15 94093223 94093335 -9401639 + CT-rich Low_complexity Low_complexity 1 114 0 1 1302 213 39 0 0 chr15 94093344 94093370 -9401604 + (CCCCCT)n Simple_repeat Simple_repeat 5 30 0 1 1302 320 224 84 46 chr15 94093384 94093515 -9401459 + Lx8 LINE L1 7331 7466 -7 1 1302 205 51 0 49 chr15 94096376 94096417 -9398557 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1302 210 276 101 37 chr15 94096830 94096939 -9398035 + PB1D7 SINE Alu 3 118 -2 1 1302 3261 60 8 0 chr15 94097227 94097627 -9397347 + MTB_Mm LTR MaLR 5 407 0 1 1302 346 175 161 12 chr15 94098372 94098453 -9396521 + RLTR23 LTR ERV1 8 100 -330 1 1302 330 209 11 42 chr15 94098618 94098713 -9396261 + RLTR23 LTR ERV1 339 430 0 1 1302 291 323 40 8 chr15 94099205 94099330 -9395644 + MTE2b LTR MaLR 2 130 -249 1 1302 1248 156 9 5 chr15 94099641 94099860 -9395114 - URR1B DNA MER1_type 0 225 6 1 1302 576 268 67 27 chr15 94102510 94102745 -9392229 - B4A SINE B4 -7 285 1 1 1302 242 308 0 49 chr15 94103186 94103268 -9391706 - ID4_ SINE ID -3 80 3 1 1302 318 319 43 0 chr15 94103283 94103377 -9391597 - B1F SINE Alu -9 140 43 1 1302 528 278 28 17 chr15 94104447 94104626 -9390348 + RCHARR1 DNA MER1_type 735 915 -59 1 1302 599 344 75 6 chr15 94105189 94105508 -9389466 - L1M2a LINE L1 -5904 1264 924 1 1302 1439 129 9 5 chr15 94105696 94105914 -9389060 + URR1B DNA MER1_type 5 223 -2 1 1302 300 261 124 55 chr15 94106150 94106417 -9388557 + L1MC LINE L1 5143 5423 -2572 1 1302 216 0 0 0 chr15 94106417 94106441 -9388533 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1302 335 239 64 45 chr15 94106441 94106575 -9388399 + L1MC LINE L1 5424 5563 -781 1 1302 232 239 182 0 chr15 94106615 94106703 -9388271 + L1M5 LINE L1 5637 5740 -439 1 1302 863 134 12 29 chr15 94108150 94108498 -9386476 + GA-rich Low_complexity Low_complexity 1 341 0 1 1302 449 90 45 0 chr15 94108498 94108587 -9386387 + (GGA)n Simple_repeat Simple_repeat 1 93 0 1 1302 814 241 61 47 chr15 94108685 94108963 -9386011 + B4A SINE B4 5 286 -6 1 1302 378 0 0 0 chr15 94109002 94109044 -9385930 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1302 318 287 16 39 chr15 94109107 94109234 -9385740 + L1M4b LINE L1 67 190 -7144 1 1302 384 182 146 20 chr15 94109251 94109402 -9385572 + L1M4b LINE L1 3779 3948 -3058 1 1302 571 277 30 82 chr15 94109411 94109643 -9385331 + Lx9 LINE L1 6960 7179 -465 1 1303 182 284 14 56 chr15 94112723 94112794 -9382180 + L2 LINE L2 2243 2310 -1109 1 1303 180 357 26 9 chr15 94114582 94114695 -9380279 - MIR SINE MIR -123 139 25 1 1303 341 200 23 23 chr15 94114813 94114900 -9380074 - L1M4 LINE L1 -1441 4705 4619 1 1303 339 309 93 31 chr15 94114921 94115275 -9379699 + L1M4 LINE L1 4824 5199 -947 1 1303 1320 283 121 30 chr15 94115257 94115679 -9379295 + Lx9 LINE L1 6413 6879 -765 1 1303 1429 146 14 5 chr15 94115679 94115900 -9379074 - URR1B DNA MER1_type -2 223 1 1 1303 1320 283 121 30 chr15 94115900 94116016 -9378958 + Lx9 LINE L1 6880 7000 -644 1 1303 235 128 0 0 chr15 94116020 94116059 -9378915 + MTE2b LTR MaLR 339 377 -2 1 1303 253 238 97 19 chr15 94116315 94116418 -9378556 + PB1D7 SINE Alu 5 115 -5 1 1303 236 325 0 12 chr15 94116425 94116506 -9378468 + G-rich Low_complexity Low_complexity 2 81 0 1 1303 220 265 0 0 chr15 94116620 94116669 -9378305 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 1303 486 211 0 0 chr15 94117092 94117201 -9377773 + (TA)n Simple_repeat Simple_repeat 1 109 0 1 1303 443 221 90 35 chr15 94117545 94117690 -9377284 - MLT-int LTR MaLR -1532 203 51 1 1303 447 337 83 28 chr15 94117735 94117972 -9377002 - MLT1A0 LTR MaLR -9 399 105 1 1303 1148 83 12 0 chr15 94121597 94121925 -9373049 + (TAGA)n Simple_repeat Simple_repeat 1 332 0 1 1303 188 246 14 0 chr15 94123161 94123230 -9371744 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 1303 410 345 22 66 chr15 94123237 94123420 -9371554 + B3A SINE B2 1 175 -23 1 1303 851 219 148 0 chr15 94124136 94124319 -9370655 - B3 SINE B2 -6 210 1 1 1303 570 15 0 0 chr15 94124430 94124497 -9370477 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 1303 407 212 123 78 chr15 94125229 94125408 -9369566 + RLTR15 LTR ERVK 1 187 -172 1 1303 286 235 132 16 chr15 94125432 94125553 -9369421 + RLTR15 LTR ERVK 161 295 -64 1 1303 42223 5 1 0 chr15 94125872 94132493 -9362481 - L1Md_A LINE L1 0 6582 1 1 1303 297 0 0 0 chr15 94133572 94133605 -9361369 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1303 1659 52 0 74 chr15 94134277 94134537 -9360437 - L1Md_F3 LINE L1 0 6584 6358 1 1303 316 333 119 12 chr15 94134538 94134857 -9360117 + L1MA4 LINE L1 5564 5916 -384 1 1303 22 88 0 0 chr15 94135214 94135271 -9359703 + AT_rich Low_complexity Low_complexity 1 57 0 1 1303 279 245 0 0 chr15 94135289 94135342 -9359632 + (TATG)n Simple_repeat Simple_repeat 2 54 0 1 1303 640 240 3 11 chr15 94135345 94135628 -9359346 + (TA)n Simple_repeat Simple_repeat 1 280 0 1 1303 1669 43 0 0 chr15 94135696 94135881 -9359093 - B2_Mm1t SINE B2 -7 186 2 1 1303 250 275 12 48 chr15 94136295 94136379 -9358595 + ID SINE ID 4 84 -140 1 1303 879 229 32 41 chr15 94136459 94136678 -9358296 - ID_B1 SINE B4 -7 217 1 1 1303 5883 45 0 0 chr15 94136716 94137383 -9357591 + L1Md_T LINE L1 5916 6582 0 1 1303 345 194 151 56 chr15 94139339 94139545 -9355429 - MTC LTR MaLR -125 294 26 1 1303 228 213 0 0 chr15 94139560 94139607 -9355367 + G-rich Low_complexity Low_complexity 1 47 0 1 1303 678 246 7 7 chr15 94139704 94139843 -9355131 - B1_Mur1 SINE Alu -10 139 1 1 1303 1063 311 62 6 chr15 94140896 94141236 -9353738 + ORR1E LTR MaLR 1 359 0 1 1303 288 127 0 0 chr15 94141459 94141514 -9353460 + (TTCC)n Simple_repeat Simple_repeat 2 56 0 1 1303 797 92 8 0 chr15 94141514 94141634 -9353340 + (TTCTC)n Simple_repeat Simple_repeat 1 121 0 2 1303 207 88 0 0 chr15 94141934 94141968 -9353006 + (TTG)n Simple_repeat Simple_repeat 1 34 0 2 1303 281 354 20 0 chr15 94141969 94142068 -9352906 - PB1D7 SINE Alu -18 102 2 2 1303 311 224 0 0 chr15 94142570 94142619 -9352355 - B1F2 SINE Alu -100 49 1 2 1303 256 196 0 0 chr15 94144357 94144403 -9350571 + L1M5 LINE L1 5470 5515 -725 2 1303 263 324 54 7 chr15 94144419 94144568 -9350406 + L1M5 LINE L1 5561 5716 -457 2 1303 982 219 33 24 chr15 94146731 94146941 -9348033 - B3 SINE B2 -4 212 1 2 1303 256 233 120 22 chr15 94146952 94147044 -9347930 - PB1D10 SINE Alu -2 115 15 2 1303 249 209 26 141 chr15 94147084 94147162 -9347812 + B1F2 SINE Alu 16 84 -65 2 1303 387 0 0 0 chr15 94147382 94147425 -9347549 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1303 659 240 70 19 chr15 94149575 94149732 -9345242 + RSINE1 SINE B4 1 165 0 2 1303 236 53 26 0 chr15 94149735 94149773 -9345201 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2 1303 219 69 0 0 chr15 94150249 94150278 -9344696 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1303 809 215 155 5 chr15 94153455 94153642 -9341332 - ID_B1 SINE B4 -5 219 5 2 1303 3153 138 77 117 chr15 94154028 94154757 -9340217 + RMER6A LTR ERVK 57 756 0 2 1303 223 191 42 21 chr15 94155454 94155502 -9339472 + B1_Mus1 SINE Alu 6 54 -94 2 1303 273 271 0 0 chr15 94155539 94155716 -9339258 + GA-rich Low_complexity Low_complexity 2 178 0 2 1303 452 157 14 52 chr15 94155720 94155831 -9339143 + PB1D9 SINE Alu 40 149 0 2 1303 2528 114 11 8 chr15 94156979 94157358 -9337616 + Lx2 LINE L1 6264 6643 -354 2 1303 1493 110 5 0 chr15 94157358 94157567 -9337407 + Lx2 LINE L1 6775 6984 -13 2 1303 325 266 45 0 chr15 94158676 94158830 -9336144 + (CAGGA)n Simple_repeat Simple_repeat 5 165 0 2 1303 279 0 0 0 chr15 94159129 94159160 -9335814 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 1303 478 300 22 111 chr15 94160026 94160206 -9334768 - RSINE1 SINE B4 0 165 2 2 1303 372 59 0 0 chr15 94161085 94161136 -9333838 + (TAA)n Simple_repeat Simple_repeat 2 52 0 2 1303 4595 49 2 0 chr15 94161156 94161682 -9333292 - L1Md_F2 LINE L1 -2 6580 6054 2 1303 426 20 0 0 chr15 94162151 94162202 -9332772 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 1303 441 172 0 0 chr15 94162335 94162428 -9332546 + (TG)n Simple_repeat Simple_repeat 1 93 0 2 1303 21 0 0 0 chr15 94162759 94162780 -9332194 + AT_rich Low_complexity Low_complexity 1 21 0 2 1303 3807 10 0 2 chr15 94163574 94163971 -9331003 + MTA_Mm LTR MaLR 1 396 0 2 1303 287 320 92 40 chr15 94164711 94165059 -9329915 + L1MC2 LINE L1 5963 6328 -16 2 1303 388 271 83 25 chr15 94165577 94165781 -9329193 - MER33 DNA MER1_type -24 300 85 2 1303 214 98 19 19 chr15 94166314 94166366 -9328608 + (CAAAAA)n Simple_repeat Simple_repeat 2 53 0 2 1303 772 186 25 6 chr15 94167695 94167857 -9327117 + MTD LTR MaLR 1 165 -254 2 1303 280 151 19 0 chr15 94167857 94167910 -9327064 + MTD LTR MaLR 357 410 -9 2 1303 222 220 0 20 chr15 94169746 94169797 -9325177 + C-rich Low_complexity Low_complexity 4 53 0 2 1303 1010 275 31 84 chr15 94170079 94170460 -9324514 + MTE2b LTR MaLR 18 378 -1 2 1303 613 212 57 52 chr15 94171883 94172077 -9322897 - B3A SINE B2 0 198 4 2 1303 294 73 0 0 chr15 94172394 94172435 -9322539 + (A)n Simple_repeat Simple_repeat 1 41 0 2 1303 217 172 52 0 chr15 94173679 94173737 -9321237 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 2 1303 186 71 0 0 chr15 94173904 94173932 -9321042 + (TTG)n Simple_repeat Simple_repeat 3 30 0 2 1303 518 297 24 6 chr15 94173945 94174111 -9320863 + ID_B1 SINE B4 2 170 -54 2 1303 354 307 50 0 chr15 94174032 94174133 -9320841 + PB1D10 SINE Alu 11 116 -1 2 1303 1249 158 10 10 chr15 94174823 94175028 -9319946 + B3 SINE B2 2 206 -10 2 1303 304 325 0 0 chr15 94175252 94175332 -9319642 - RSINE1 SINE B4 -48 117 38 2 1303 3199 145 21 21 chr15 94176634 94177163 -9317811 + Lx2 LINE L1 6469 6997 0 2 1303 353 117 17 0 chr15 94178644 94178704 -9316270 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1303 323 44 22 0 chr15 94178728 94178773 -9316201 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1303 811 289 21 21 chr15 94178778 94179114 -9315860 + L1M2 LINE L1 4409 4744 -1399 2 1303 270 0 0 0 chr15 94179918 94179948 -9315026 + (TTG)n Simple_repeat Simple_repeat 1 30 0 2 1303 963 147 0 17 chr15 94180371 94180544 -9314430 - URR1A DNA MER1_type 0 226 57 2 1303 786 185 7 13 chr15 94180564 94180717 -9314257 - URR1A DNA MER1_type -16 210 59 2 1303 662 225 24 95 chr15 94181456 94181667 -9313307 + B3A SINE B2 3 198 0 2 1303 206 0 0 65 chr15 94182339 94182370 -9312604 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1303 627 236 60 13 chr15 94183678 94183828 -9311146 - RSINE1 SINE B4 -6 159 3 2 1303 22 35 0 0 chr15 94186032 94186061 -9308913 + AT_rich Low_complexity Low_complexity 1 29 0 2 1303 387 0 0 0 chr15 94187475 94187518 -9307456 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1303 932 241 10 0 chr15 94187551 94187746 -9307228 + B3 SINE B2 16 212 -4 2 1303 1326 241 64 8 chr15 94187775 94188148 -9306826 + Lx9 LINE L1 7052 7445 -199 2 1303 409 165 21 0 chr15 94188158 94188255 -9306719 + CT-rich Low_complexity Low_complexity 2 100 0 2 1303 1285 46 0 0 chr15 94188635 94188788 -9306186 - L1_Mus3 LINE L1 -718 5920 5768 2 1303 4976 60 11 20 chr15 94188788 94189461 -9305513 + L1_Mus3 LINE L1 5992 6638 0 2 1303 6441 58 30 19 chr15 94189696 94190542 -9304432 + RLTR13A LTR ERVK 1 855 0 2 1303 25 0 0 0 chr15 94190934 94190959 -9304015 + AT_rich Low_complexity Low_complexity 1 25 0 2 1303 444 37 0 0 chr15 94192622 94192676 -9302298 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 1303 508 209 69 9 chr15 94192696 94192812 -9302162 - B1_Mur2 SINE Alu -6 143 21 2 1303 365 123 0 15 chr15 94193303 94193369 -9301605 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 1303 248 221 11 23 chr15 94193765 94193853 -9301121 + (TATAA)n Simple_repeat Simple_repeat 2 88 0 2 1303 241 272 0 24 chr15 94193937 94194020 -9300954 + CT-rich Low_complexity Low_complexity 2 82 0 2 1303 5560 46 5 3 chr15 94194629 94195298 -9299676 + L1_Mus1 LINE L1 5898 6567 0 2 1303 422 310 28 50 chr15 94195343 94195523 -9299451 + B4A SINE B4 53 228 -64 2 1303 1031 64 0 0 chr15 94195697 94195837 -9299137 - B1_Mus1 SINE Alu 0 148 9 2 1303 35 24 0 0 chr15 94195936 94195978 -9298996 + AT_rich Low_complexity Low_complexity 1 42 0 2 1303 252 291 0 23 chr15 94196108 94196196 -9298778 + (CA)n Simple_repeat Simple_repeat 1 86 0 2 1303 4804 90 10 9 chr15 94197321 94198008 -9296966 + Lx3_Mus LINE L1 6311 6998 -11 2 1303 282 87 0 0 chr15 94199435 94199481 -9295493 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1303 2682 245 72 62 chr15 94199617 94200578 -9294396 - L1_Rod LINE L1 -1545 4302 3333 2 1303 2557 245 95 42 chr15 94200580 94201588 -9293386 + L1_Rod LINE L1 4328 5389 -458 2 1303 1733 250 37 30 chr15 94201583 94202343 -9292631 + Lx LINE L1 6018 6243 -411 2 1303 42073 5 1 0 chr15 94203429 94209956 -9285018 - L1Md_A LINE L1 0 6582 53 2 1303 369 228 224 42 chr15 94209956 94210121 -9284853 + B3A SINE B2 4 198 0 2 1303 519 17 0 0 chr15 94211030 94211090 -9283884 + (TTCC)n Simple_repeat Simple_repeat 1 60 0 2 1303 503 139 0 10 chr15 94211260 94211362 -9283612 + (TG)n Simple_repeat Simple_repeat 2 102 0 2 1303 639 241 8 0 chr15 94213592 94213725 -9281249 + ID_B1 SINE B4 83 216 -8 2 1303 250 195 52 0 chr15 94213832 94213909 -9281065 + (TATAG)n Simple_repeat Simple_repeat 3 83 0 2 1303 938 101 0 7 chr15 94214712 94214791 -9280183 + (GAA)n Simple_repeat Simple_repeat 2 80 0 2 1303 1326 78 0 0 chr15 94214791 94214971 -9280003 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 2 1303 1431 67 0 1 chr15 94214971 94215399 -9279575 + (GAA)n Simple_repeat Simple_repeat 1 427 0 2 1303 241 341 37 32 chr15 94215870 94216058 -9278916 - MIR SINE MIR 0 262 74 2 1303 726 282 0 46 chr15 94216849 94217046 -9277928 + B3 SINE B2 1 188 -28 2 1303 697 288 98 52 chr15 94217082 94217489 -9277485 + L1_Rod LINE L1 3774 4199 -1648 2 1303 240 250 0 56 chr15 94218415 94218504 -9276470 + GA-rich Low_complexity Low_complexity 1 84 0 2 1303 254 306 47 114 chr15 94218572 94218871 -9276103 + L1M4 LINE L1 3922 4200 -1946 2 1303 682 237 0 0 chr15 94219195 94219330 -9275644 + B3A SINE B2 26 160 -38 2 1303 603 62 0 0 chr15 94219333 94219413 -9275561 + (CA)n Simple_repeat Simple_repeat 2 81 0 2 1303 207 0 0 0 chr15 94219579 94219602 -9275372 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 2 1303 324 237 26 0 chr15 94219753 94219829 -9275145 + ORR1D1 LTR MaLR 66 143 -231 2 1303 999 0 0 0 chr15 94219842 94219953 -9275021 + (TCTCCC)n Simple_repeat Simple_repeat 4 114 0 2 1303 413 179 48 0 chr15 94219954 94220038 -9274936 + ORR1D1 LTR MaLR 287 374 0 2 1303 305 114 310 34 chr15 94220519 94220635 -9274339 - B2_Mm2 SINE B2 -1 194 47 2 1303 1116 100 0 0 chr15 94220703 94220863 -9274111 - B2_Mm2 SINE B2 -35 160 1 2 1303 1082 80 0 0 chr15 94221374 94221512 -9273462 + B1_Mus2 SINE Alu 3 140 -7 2 1303 207 0 0 0 chr15 94221512 94221535 -9273439 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2 1303 915 98 0 0 chr15 94221539 94221671 -9273303 + (GAAA)n Simple_repeat Simple_repeat 3 134 0 2 1303 218 125 0 35 chr15 94222011 94222069 -9272905 + T-rich Low_complexity Low_complexity 4 59 0 2 1303 1094 82 7 0 chr15 94222071 94222218 -9272756 - B1_Mus1 SINE Alu 0 148 1 2 1303 244 225 136 12 chr15 94222227 94222308 -9272666 + B4A SINE B4 113 203 -89 2 1303 525 64 39 0 chr15 94223737 94223815 -9271159 - B2_Mm2 SINE B2 -109 86 6 2 1303 255 202 12 25 chr15 94224119 94224200 -9270774 + (TA)n Simple_repeat Simple_repeat 2 81 0 2 1303 241 314 0 0 chr15 94225277 94225347 -9269627 + ID4 SINE ID 3 72 -11 3 1303 2325 117 8 17 chr15 94226201 94226557 -9268417 + Lx2 LINE L1 6645 6997 0 3 1303 757 303 42 19 chr15 94226652 94226867 -9268107 + B4A SINE B4 1 220 -72 3 1303 331 300 0 0 chr15 94227281 94227361 -9267613 + ID2 SINE ID 1 80 -3 3 1303 629 146 7 0 chr15 94228635 94228772 -9266202 + (TG)n Simple_repeat Simple_repeat 2 139 0 3 1303 1568 33 5 5 chr15 94228873 94229058 -9265916 - B2_Mm1t SINE B2 -8 185 1 3 1303 576 211 22 106 chr15 94229074 94229300 -9265674 - B4 SINE B4 -79 213 7 3 1303 267 295 144 21 chr15 94229393 94229490 -9265484 + LTR16B2 LTR ERVL 354 462 0 3 1303 385 319 8 17 chr15 94229599 94229717 -9265257 + RSINE1 SINE B4 2 118 -47 3 1303 717 33 0 0 chr15 94230970 94231062 -9263912 + L1Md_A LINE L1 6491 6582 0 3 1303 22 35 0 0 chr15 94231231 94231260 -9263714 + AT_rich Low_complexity Low_complexity 1 29 0 3 1303 201 74 0 0 chr15 94231296 94231323 -9263651 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 3 1303 805 126 14 43 chr15 94231811 94231952 -9263022 + B1_Mur3 SINE Alu 13 149 0 3 1303 1375 216 43 103 chr15 94232028 94232446 -9262528 - MTD LTR MaLR -8 411 19 3 1303 210 71 0 0 chr15 94233064 94233092 -9261882 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 3 1303 28 29 0 0 chr15 94234811 94234846 -9260128 + GC_rich Low_complexity Low_complexity 1 35 0 3 1303 28 79 0 0 chr15 94234872 94234935 -9260039 + GC_rich Low_complexity Low_complexity 1 63 0 3 1303 1333 288 109 95 chr15 94236352 94237285 -9257689 - Lx8 LINE L1 -2 7471 6526 3 1303 324 236 14 14 chr15 94237958 94238031 -9256943 - ID4 SINE ID -8 75 3 3 1303 395 282 42 11 chr15 94238328 94238518 -9256456 - L1MEc LINE L1 -4024 2376 2181 3 1303 442 212 12 0 chr15 94238606 94238691 -9256283 - RSINE1 SINE B4 -62 103 18 3 1303 270 206 27 14 chr15 94238704 94238778 -9256196 - L1MEc LINE L1 -4241 2159 2085 3 1303 423 0 0 0 chr15 94238828 94238875 -9256099 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 1303 2439 167 31 16 chr15 94239055 94239454 -9255520 + RLTR16 LTR ERVK 1 403 -102 3 1303 396 0 0 0 chr15 94239454 94239498 -9255476 + (TC)n Simple_repeat Simple_repeat 2 45 0 3 1303 315 0 0 0 chr15 94239498 94239532 -9255442 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1303 2439 167 31 16 chr15 94239532 94239617 -9255357 + RLTR16 LTR ERVK 404 492 -13 3 1303 252 257 29 0 chr15 94239618 94239688 -9255286 + RLTR16 LTR ERVK 434 505 0 3 1303 566 160 0 29 chr15 94239816 94239919 -9255055 - MTC LTR MaLR -321 100 1 3 162 3647 195 157 13 chr15 94239920 94240849 -9254125 - MTC-int LTR MaLR -1 1257 195 3 1304 222 128 0 0 chr15 94240994 94241033 -9253941 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 3 1304 3727 87 4 4 chr15 94241093 94241587 -9253387 - L1Md_F2 LINE L1 -14 6568 6075 3 1304 2579 244 110 35 chr15 94241786 94242594 -9252380 + RMER1C Other Other 474 1342 0 3 1304 469 156 21 0 chr15 94242669 94242765 -9252209 + (TA)n Simple_repeat Simple_repeat 2 99 0 3 1304 335 266 63 21 chr15 94243198 94243340 -9251634 + L1ME3A LINE L1 5653 5800 -373 3 1304 232 314 101 82 chr15 94243499 94243718 -9251256 + L1ME3A LINE L1 5937 6159 -14 3 1304 836 236 11 11 chr15 94243983 94244163 -9250811 + B3 SINE B2 36 215 -1 3 1304 276 258 15 0 chr15 94244286 94244352 -9250622 + U4 snRNA snRNA 1 67 -78 3 1304 276 300 62 28 chr15 94244634 94244778 -9250196 - B1F SINE Alu 0 149 1 3 1304 3403 195 72 1 chr15 94244887 94245600 -9249374 + Lx9 LINE L1 6729 7491 -153 3 1304 219 103 0 0 chr15 94246243 94246282 -9248692 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 3 1304 283 278 59 67 chr15 94246689 94246824 -9248150 + L1M2 LINE L1 5525 5658 -654 3 1304 242 220 51 0 chr15 94246823 94246882 -9248092 + L1MB1 LINE L1 6104 6165 -3 3 1304 331 216 44 33 chr15 94247192 94247283 -9247691 + BC1_Mm scRNA scRNA 14 105 -47 3 1304 252 317 50 14 chr15 94247364 94247505 -9247469 + L1M3 LINE L1 5512 5657 -514 3 1304 696 24 0 0 chr15 94252249 94252331 -9242643 + (GGGA)n Simple_repeat Simple_repeat 4 85 0 3 1304 192 208 16 48 chr15 94252361 94252487 -9242487 + (TG)n Simple_repeat Simple_repeat 1 122 0 3 1304 321 100 0 0 chr15 94252487 94252537 -9242437 - HAL1-3A_ME LINE L1 -840 2018 1969 3 1304 279 321 62 41 chr15 94254562 94254708 -9240266 - MLT1A1 LTR MaLR -1 407 259 3 1304 1279 119 101 29 chr15 94254767 94254975 -9239999 - URR1A DNA MER1_type 0 226 4 3 1304 6741 198 40 8 chr15 94255031 94256317 -9238657 - Lx5 LINE L1 0 7050 5723 3 1304 971 213 64 0 chr15 94256520 94256722 -9238252 + B3 SINE B2 2 216 0 3 1304 384 208 0 0 chr15 94256732 94256838 -9238136 + GA-rich Low_complexity Low_complexity 3 108 0 3 1304 1112 102 0 11 chr15 94256863 94257042 -9237932 + (GGAA)n Simple_repeat Simple_repeat 2 178 0 3 1304 390 42 0 0 chr15 94257401 94257449 -9237525 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 3 1304 282 253 217 43 chr15 94257582 94257817 -9237157 + LTR52 LTR ERVL 56 331 -90 3 1304 67 25 0 0 chr15 94257823 94257904 -9237070 + AT_rich Low_complexity Low_complexity 1 81 0 3 1304 1370 66 5 32 chr15 94257907 94258095 -9236879 - B2_Mm2 SINE B2 -11 184 2 3 1304 731 341 83 72 chr15 94258198 94258725 -9236249 + MLT1F2 LTR MaLR 27 559 -1 3 1304 387 56 0 0 chr15 94259523 94259577 -9235397 + (CAGA)n Simple_repeat Simple_repeat 3 56 0 3 1304 271 303 30 8 chr15 94259678 94259811 -9235163 + GA-rich Low_complexity Low_complexity 3 138 0 3 1304 293 297 96 28 chr15 94260006 94260224 -9234750 - L1MC3 LINE L1 -239 7546 7314 3 1304 782 252 63 24 chr15 94262702 94262909 -9232065 + B3 SINE B2 1 215 -1 3 1304 1418 91 5 0 chr15 94263159 94263357 -9231617 - L1_Mus4 LINE L1 -578 6058 5860 3 1304 4462 78 34 15 chr15 94263357 94263971 -9231003 + L1_Mus4 LINE L1 5992 6617 -19 3 1304 360 0 0 0 chr15 94263971 94264011 -9230963 + (TAA)n Simple_repeat Simple_repeat 3 42 0 3 1304 298 244 0 85 chr15 94264696 94264717 -9230257 - PB1D10 SINE Alu -8 109 24 3 1304 351 247 0 0 chr15 94264717 94264790 -9230184 - ID_B1 SINE B4 -47 177 105 3 1304 823 294 41 41 chr15 94265152 94265468 -9229506 - MLT1A0 LTR MaLR -10 355 40 3 1304 180 111 0 0 chr15 94265482 94265509 -9229465 + (CAT)n Simple_repeat Simple_repeat 2 28 0 3 1304 245 292 0 0 chr15 94266161 94266226 -9228748 - L2a LINE L2 -8 3418 3354 3 1304 1121 181 97 5 chr15 94267772 94267978 -9226996 - URR1B DNA MER1_type 0 225 1 3 1304 295 205 84 59 chr15 94268733 94268852 -9226122 - Lx9 LINE L1 -6 7638 7517 3 1304 297 75 0 0 chr15 94268886 94268926 -9226048 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1304 1533 48 11 0 chr15 94270173 94270359 -9224615 - B2_Mm1t SINE B2 -4 189 2 3 1304 4779 62 0 8 chr15 94270504 94271108 -9223866 + L1Md_F2 LINE L1 5984 6582 0 3 1304 24 32 0 0 chr15 94271112 94271143 -9223831 + AT_rich Low_complexity Low_complexity 1 31 0 3 1304 313 184 0 0 chr15 94271288 94271337 -9223637 + polypurine Low_complexity Low_complexity 3 51 0 3 1304 881 146 6 22 chr15 94271338 94271520 -9223454 + GA-rich Low_complexity Low_complexity 2 180 0 3 1304 220 91 0 29 chr15 94271520 94271554 -9223420 + (GGA)n Simple_repeat Simple_repeat 2 34 0 3 1304 1182 112 0 0 chr15 94271554 94271732 -9223242 + (GAA)n Simple_repeat Simple_repeat 1 178 0 3 1304 231 328 27 81 chr15 94272145 94272294 -9222680 + MER5A1 DNA MER1_type 19 159 -7 3 1304 324 234 170 82 chr15 94272359 94272494 -9222480 - B3A SINE B2 -3 195 49 3 1304 356 338 22 0 chr15 94273056 94273192 -9221782 + CT-rich Low_complexity Low_complexity 2 140 0 3 1304 230 157 98 0 chr15 94273750 94273801 -9221173 + ID4 SINE ID 3 58 -25 3 1304 348 24 0 0 chr15 94275639 94275680 -9219294 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1304 597 52 0 0 chr15 94275680 94275756 -9219218 + (GA)n Simple_repeat Simple_repeat 1 77 0 3 1304 273 57 0 0 chr15 94275770 94275805 -9219169 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1304 189 0 0 0 chr15 94275835 94275856 -9219118 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 1304 416 172 0 8 chr15 94275856 94275973 -9219001 + GA-rich Low_complexity Low_complexity 2 117 0 3 1304 266 0 29 0 chr15 94276026 94276060 -9218914 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1304 243 0 0 0 chr15 94276060 94276086 -9218888 + (GA)n Simple_repeat Simple_repeat 1 27 0 3 1304 544 161 14 0 chr15 94276100 94276243 -9218731 + (TG)n Simple_repeat Simple_repeat 1 145 0 3 1304 307 229 0 13 chr15 94276242 94276274 -9218700 + polypurine Low_complexity Low_complexity 1 32 0 3 1304 279 0 0 0 chr15 94276274 94276305 -9218669 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1304 307 229 0 13 chr15 94276305 94276431 -9218543 + GA-rich Low_complexity Low_complexity 33 156 0 3 1304 366 23 0 0 chr15 94276447 94276490 -9218484 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1304 310 283 17 0 chr15 94276523 94276643 -9218331 + (TG)n Simple_repeat Simple_repeat 1 122 0 3 1304 561 30 0 0 chr15 94276643 94276710 -9218264 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 1304 816 243 148 31 chr15 94276793 94277116 -9217858 + Lx7 LINE L1 5553 5912 -1784 3 1304 279 229 76 5 chr15 94277328 94277433 -9217541 - L1M2 LINE L1 -596 5716 5600 3 1304 706 45 171 0 chr15 94277501 94277612 -9217362 - B1_Mm SINE Alu -7 140 11 3 1304 892 192 104 0 chr15 94277616 94277809 -9217165 - B3 SINE B2 -1 215 3 3 1304 1325 316 70 35 chr15 94277821 94278527 -9216447 - L1M2 LINE L1 -708 5604 4795 3 1304 459 0 0 0 chr15 94278527 94278578 -9216396 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1304 2256 124 3 0 chr15 94278578 94278901 -9216073 - ORR1A2 LTR MaLR -3 324 1 3 1304 1325 322 65 61 chr15 94278901 94280034 -9214940 - L1M2 LINE L1 -1349 4794 3649 3 1304 297 0 0 0 chr15 94280131 94280164 -9214810 + (CAA)n Simple_repeat Simple_repeat 1 33 0 3 1304 2109 142 50 36 chr15 94280660 94281178 -9213796 - RLTR31_Mm LTR ERVK -88 604 2 3 1304 1230 38 0 0 chr15 94282483 94282641 -9212333 + B2_Mm1a SINE B2 1 158 -35 4 1304 225 0 0 0 chr15 94282641 94282666 -9212308 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 4 1304 605 158 8 40 chr15 94283747 94283872 -9211102 - B1_Mus1 SINE Alu -1 147 27 4 1304 180 231 0 0 chr15 94284323 94284375 -9210599 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 1304 246 353 65 0 chr15 94284389 94284542 -9210432 - RSINE1 SINE B4 0 165 3 4 1304 270 238 16 0 chr15 94284826 94284889 -9210085 + MLT1C LTR MaLR 320 383 -84 4 1304 21 0 0 0 chr15 94285314 94285335 -9209639 + AT_rich Low_complexity Low_complexity 1 21 0 4 1304 1959 228 112 29 chr15 94287022 94287613 -9207361 - Lx7 LINE L1 0 7696 7057 4 1304 183 156 0 0 chr15 94288550 94288582 -9206392 + CT-rich Low_complexity Low_complexity 2 33 0 4 1304 2263 85 3 0 chr15 94289615 94289933 -9205041 + ORR1A2 LTR MaLR 1 319 -8 4 1304 315 0 0 0 chr15 94289954 94289989 -9204985 + (GA)n Simple_repeat Simple_repeat 1 35 0 4 1304 380 303 0 0 chr15 94289989 94290078 -9204896 - RSINE1 SINE B4 -71 94 6 4 1304 688 267 55 0 chr15 94290892 94291094 -9203880 + B3 SINE B2 1 213 -3 4 1304 216 0 0 0 chr15 94292033 94292057 -9202917 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1304 243 0 0 0 chr15 94293738 94293765 -9201209 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1304 1414 179 103 3 chr15 94294517 94294837 -9200137 + RLTR15 LTR ERVK 4 355 -4 4 1304 719 221 101 75 chr15 94295773 94296206 -9198768 - RMER2 LTR ERV1 -54 513 28 4 1304 191 364 0 25 chr15 94296389 94296468 -9198506 + L2a LINE L2 3340 3416 -10 4 1304 867 158 134 52 chr15 94297506 94297700 -9197274 - B3 SINE B2 -5 211 2 4 1304 499 292 150 21 chr15 94298339 94298519 -9196455 + Lx8 LINE L1 7109 7298 -175 4 1304 477 0 0 0 chr15 94298519 94298572 -9196402 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1304 499 292 150 21 chr15 94298572 94298678 -9196296 + Lx8 LINE L1 7299 7431 -42 4 1304 459 0 0 0 chr15 94300287 94300338 -9194636 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 1304 195 302 19 0 chr15 94301142 94301195 -9193779 - MIR SINE MIR -181 81 28 4 1304 246 62 0 0 chr15 94301310 94301342 -9193632 + (A)n Simple_repeat Simple_repeat 1 32 0 4 1304 460 332 32 32 chr15 94301669 94301859 -9193115 + MER63A DNA AcHobo 1 190 -20 4 1304 1310 191 84 38 chr15 94302114 94302464 -9192510 - RMER19B LTR ERVK -346 391 3 4 1304 30 27 0 0 chr15 94303003 94303040 -9191934 + AT_rich Low_complexity Low_complexity 1 37 0 4 1304 953 218 70 9 chr15 94303136 94303349 -9191625 + URR1A DNA MER1_type 1 226 0 4 1304 402 327 65 74 chr15 94303536 94303889 -9191085 - MLT1A0 LTR MaLR -15 350 1 4 1304 1034 212 14 14 chr15 94304671 94304886 -9190088 + B3 SINE B2 1 215 -1 4 1304 553 326 30 13 chr15 94305397 94305630 -9189344 + Lx9 LINE L1 7196 7432 -212 4 1304 729 33 0 0 chr15 94306321 94306413 -9188561 + (TG)n Simple_repeat Simple_repeat 1 92 0 4 1304 198 0 0 0 chr15 94306733 94306755 -9188219 + (TC)n Simple_repeat Simple_repeat 1 22 0 4 1304 405 0 0 0 chr15 94306755 94306799 -9188175 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1304 293 312 77 24 chr15 94306850 94307057 -9187917 + L2 LINE L2 1814 2031 -1388 4 1304 399 83 0 0 chr15 94308502 94308562 -9186412 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1304 210 292 21 63 chr15 94308711 94308806 -9186168 - B4A SINE B4 -201 91 1 4 1304 897 230 132 0 chr15 94311269 94311504 -9183470 + MTD LTR MaLR 141 406 -13 4 1304 372 43 0 0 chr15 94312951 94312997 -9181977 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1304 397 311 118 13 chr15 94313881 94314109 -9180865 + L1M4 LINE L1 4465 4716 -1430 4 1304 430 275 21 0 chr15 94314120 94314241 -9180733 - B3A SINE B2 -6 210 83 4 1304 399 306 148 20 chr15 94314296 94314687 -9180287 + L1M4 LINE L1 4721 5161 -985 4 1304 369 314 48 14 chr15 94314677 94314887 -9180087 + L1MA4A LINE L1 2764 2980 -3163 4 1304 243 0 0 0 chr15 94314921 94314948 -9180026 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1304 423 0 0 0 chr15 94314948 94314994 -9179980 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1304 499 294 65 0 chr15 94315161 94315314 -9179660 + RSINE1 SINE B4 3 165 0 4 1304 338 287 56 39 chr15 94315753 94315878 -9179096 - RMER15 LTR ERVL -15 560 433 4 1304 1219 61 0 0 chr15 94315878 94316025 -9178949 + B1_Mus2 SINE Alu 1 147 0 4 1304 338 287 56 39 chr15 94316025 94316077 -9178897 - RMER15 LTR ERVL -143 432 380 4 1304 285 264 139 26 chr15 94316514 94316708 -9178266 + RLTR15 LTR ERVK 71 286 -73 4 1304 425 246 77 66 chr15 94316769 94316952 -9178022 + MTD LTR MaLR 235 419 0 4 1304 501 314 43 39 chr15 94317706 94317799 -9177175 + L1MA4A LINE L1 5606 5704 -599 4 1304 3994 60 28 2 chr15 94317799 94318298 -9176676 - RLTR1B LTR ERV1 0 512 1 4 1304 501 314 43 39 chr15 94318298 94318311 -9176663 + L1MA4A LINE L1 5705 5711 -592 4 1304 6624 46 23 0 chr15 94318311 94319101 -9175873 + RLTR13C2 LTR ERVK 1 808 0 4 1304 501 319 56 46 chr15 94319101 94319317 -9175657 + L1MA4A LINE L1 5677 5906 -1567 4 1304 742 246 21 98 chr15 94319521 94319715 -9175259 - B3 SINE B2 -16 179 1 4 1304 216 346 78 10 chr15 94319780 94319882 -9175092 + PB1D10 SINE Alu 5 113 -4 4 1304 1006 134 215 0 chr15 94319947 94320133 -9174841 + URR1A DNA MER1_type 1 226 0 4 1304 260 274 16 45 chr15 94320462 94320559 -9174415 + MTE2a LTR MaLR 265 362 -17 4 1304 589 118 17 0 chr15 94320658 94320777 -9174197 + (TG)n Simple_repeat Simple_repeat 2 122 0 4 1304 719 137 23 0 chr15 94320810 94320985 -9173989 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 1304 300 27 0 0 chr15 94321012 94321049 -9173925 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1304 308 65 0 61 chr15 94321116 94321154 -9173820 - HAL1-3A_ME LINE L1 -846 2012 1976 4 1304 582 281 19 12 chr15 94321154 94321316 -9173658 - RSINE1 SINE B4 0 165 3 4 1304 2566 131 42 7 chr15 94321334 94321741 -9173233 - MTC LTR MaLR 0 421 1 4 1304 596 214 56 31 chr15 94322286 94322480 -9172494 + RLTR31B_Mm LTR ERVK 364 561 0 4 1304 799 176 159 5 chr15 94322706 94322895 -9172079 - URR1B DNA MER1_type -7 218 1 4 1304 194 0 39 0 chr15 94323069 94323095 -9171879 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1304 2579 70 0 105 chr15 94323322 94323723 -9171251 - RLTR10D LTR ERVK 0 359 1 4 1304 333 0 0 0 chr15 94323945 94323982 -9170992 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 4 1304 307 328 78 16 chr15 94324022 94324267 -9170707 + L1M2a LINE L1 1943 2202 -4966 4 1304 791 305 120 36 chr15 94324302 94324945 -9170029 + L1M2a LINE L1 5682 6378 -786 4 1304 815 195 88 21 chr15 94324950 94325144 -9169830 + B3 SINE B2 1 207 -9 4 1304 1023 261 61 3 chr15 94325170 94325500 -9169474 + L1M2a LINE L1 6373 6721 -600 4 1304 421 307 68 24 chr15 94325503 94325710 -9169264 - B3 SINE B2 0 216 1 4 1304 456 19 0 0 chr15 94325872 94325925 -9169049 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 1304 29 47 0 0 chr15 94326200 94326243 -9168731 + AT_rich Low_complexity Low_complexity 1 43 0 4 1304 243 0 0 0 chr15 94326259 94326286 -9168688 + (CCA)n Simple_repeat Simple_repeat 1 27 0 4 1304 1160 61 0 26 chr15 94326857 94327008 -9167966 + B1_Mus2 SINE Alu 1 147 0 4 1304 266 102 0 114 chr15 94327376 94327508 -9167466 + CT-rich Low_complexity Low_complexity 4 120 0 4 1304 501 333 76 94 chr15 94327749 94327817 -9167157 - Lx8 LINE L1 -298 7175 7107 4 1304 1279 238 119 8 chr15 94327817 94328194 -9166780 - MTD LTR MaLR 0 419 1 4 1304 501 333 76 94 chr15 94328194 94328378 -9166596 - Lx8 LINE L1 -367 7106 6929 4 1304 3836 44 46 4 chr15 94328378 94328857 -9166117 + L1Md_F3 LINE L1 6074 6572 -12 4 1304 501 333 76 94 chr15 94328857 94329037 -9165937 - Lx8 LINE L1 -545 6928 6750 4 1304 2150 78 36 0 chr15 94329096 94329404 -9165570 - ORR1A2 LTR MaLR -8 319 1 4 1304 1133 276 17 72 chr15 94329404 94329763 -9165211 - Lx8 LINE L1 -838 6635 6297 4 1304 707 202 79 27 chr15 94329764 94329973 -9165001 + L1_Mur3 LINE L1 2206 2424 -3456 4 1304 914 164 0 17 chr15 94329979 94330159 -9164815 + GA-rich Low_complexity Low_complexity 1 177 0 4 1304 227 196 65 0 chr15 94330159 94330205 -9164769 + polypurine Low_complexity Low_complexity 4 52 0 4 1304 533 181 0 66 chr15 94330205 94330388 -9164586 + GA-rich Low_complexity Low_complexity 6 176 0 4 1304 1783 277 58 33 chr15 94330398 94331100 -9163874 + L1_Mur3 LINE L1 3655 4374 -1506 4 1304 3241 223 36 7 chr15 94331423 94332153 -9162821 - Lx9 LINE L1 -44 7600 6850 4 1304 401 261 16 12 chr15 94332366 94332572 -9162402 - HAL1-2a_MD LINE L1 -519 2505 2362 4 1304 372 261 56 0 chr15 94332547 94332689 -9162285 - HAL1-2a_MD LINE L1 -513 2511 2362 4 1304 929 169 0 8 chr15 94332692 94332934 -9162040 + (TTG)n Simple_repeat Simple_repeat 1 239 0 4 1304 310 275 70 66 chr15 94333221 94333572 -9161402 - RLTR12B LTR ERVK -257 271 1 4 1304 243 0 0 0 chr15 94335297 94335324 -9159650 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 4 1304 1193 121 11 11 chr15 94335559 94335735 -9159239 + B2_Mm1t SINE B2 4 179 -14 4 1304 278 45 0 22 chr15 94335786 94335832 -9159142 + B2_Mm2 SINE B2 137 181 -14 4 1304 451 66 0 95 chr15 94336717 94336801 -9158173 - B1_Mus2 SINE Alu 0 147 72 4 1304 491 165 0 0 chr15 94336857 94336937 -9158037 - ORR1D1 LTR MaLR 0 374 295 4 1304 2434 207 50 170 chr15 94336937 94337977 -9156997 + RMER17B LTR ERVK 1 915 -43 4 1304 1259 140 128 4 chr15 94337995 94338260 -9156714 - ORR1D1 LTR MaLR -74 300 3 4 1304 221 266 17 40 chr15 94338569 94338596 -9156378 + (TAA)n Simple_repeat Simple_repeat 1 25 0 4 1304 3077 64 5 58 chr15 94338596 94338827 -9156147 - MTB_Mm LTR MaLR 0 407 184 4 1304 1250 48 0 0 chr15 94338827 94338974 -9156000 - B1_Mus1 SINE Alu -1 147 1 4 1304 3077 64 5 58 chr15 94338974 94339172 -9155802 - MTB_Mm LTR MaLR -224 183 1 4 1304 221 266 17 40 chr15 94339172 94339320 -9155654 + (TAA)n Simple_repeat Simple_repeat 2 147 0 4 1304 249 33 0 0 chr15 94339413 94339443 -9155531 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1304 41 21 0 0 chr15 94339665 94339713 -9155261 + AT_rich Low_complexity Low_complexity 1 48 0 4 1304 280 314 79 36 chr15 94340867 94341006 -9153968 - MLT2B1 LTR ERVL -1 566 422 4 1304 1288 78 24 0 chr15 94341020 94341203 -9153771 - L1Md_F2 LINE L1 -415 6167 6018 4 1304 263 283 77 15 chr15 94341339 94341474 -9153500 - LTR16B LTR ERVL -22 458 319 4 1304 284 257 71 35 chr15 94341714 94341827 -9153147 - L1ME1 LINE L1 -6 6158 6042 4 1304 328 246 58 40 chr15 94341889 94342063 -9152911 + (CACCC)n Simple_repeat Simple_repeat 4 180 0 5 1304 587 312 64 35 chr15 94342064 94342469 -9152505 - L1ME1 LINE L1 -178 6001 5585 4 1304 633 277 20 15 chr15 94342593 94342799 -9152175 - B3A SINE B2 -4 212 2 5 1304 957 217 50 0 chr15 94342849 94343047 -9151927 - Lx6 LINE L1 -414 7046 6839 5 1304 1724 90 0 0 chr15 94343048 94343293 -9151681 + MTB_Mm LTR MaLR 161 405 -2 5 1304 641 159 42 35 chr15 94343298 94343441 -9151533 + Lx6 LINE L1 7313 7456 -4 5 1304 823 176 0 20 chr15 94343445 94343596 -9151378 + B1_Mur4 SINE Alu 3 150 0 5 1304 314 45 23 0 chr15 94343656 94343700 -9151274 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 5 1304 752 121 21 7 chr15 94343722 94343864 -9151110 + (TTC)n Simple_repeat Simple_repeat 1 144 0 5 1304 623 238 146 56 chr15 94344170 94344423 -9150551 + B4A SINE B4 2 281 -11 5 1304 447 19 0 0 chr15 94344423 94344475 -9150499 + (GA)n Simple_repeat Simple_repeat 2 53 0 5 1304 623 238 146 56 chr15 94344475 94344488 -9150486 + B4A SINE B4 282 292 0 5 1304 849 172 0 0 chr15 94344516 94344696 -9150278 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1304 23 33 0 0 chr15 94345116 94345146 -9149828 + AT_rich Low_complexity Low_complexity 1 30 0 5 1304 419 89 13 55 chr15 94345568 94345654 -9149320 - B2_Mm2 SINE B2 -136 80 1 5 1304 369 277 61 41 chr15 94346171 94346318 -9148656 + RSINE1 SINE B4 4 153 -12 5 1304 483 260 114 96 chr15 94346383 94346715 -9148259 - RLTR14 LTR ERV1 -44 338 1 5 1304 817 117 7 7 chr15 94347048 94347186 -9147788 + (TC)n Simple_repeat Simple_repeat 2 139 0 5 1304 779 153 7 0 chr15 94347221 94347371 -9147603 + CT-rich Low_complexity Low_complexity 2 152 0 5 1304 26 74 0 0 chr15 94347496 94347550 -9147424 + AT_rich Low_complexity Low_complexity 1 54 0 5 1304 847 256 125 20 chr15 94347579 94347930 -9147044 - L1MA8 LINE L1 -2 6289 5902 5 1304 210 128 0 0 chr15 94348195 94348234 -9146740 + (G)n Simple_repeat Simple_repeat 1 39 0 5 1304 1792 239 82 10 chr15 94349155 94349641 -9145333 + Lx6 LINE L1 6914 7434 -26 5 1304 301 106 0 57 chr15 94349641 94349711 -9145263 + (TAA)n Simple_repeat Simple_repeat 1 66 0 5 1304 1977 159 43 0 chr15 94350123 94350494 -9144480 + MTC LTR MaLR 1 387 -34 5 1304 1223 257 52 16 chr15 94351442 94351806 -9143168 + MTE2b LTR MaLR 1 377 -2 5 1304 579 153 23 0 chr15 94351859 94351990 -9142984 + (TA)n Simple_repeat Simple_repeat 1 134 0 5 1304 1047 121 119 16 chr15 94352549 94352743 -9142231 - URR1A DNA MER1_type -4 222 9 5 1304 23 54 0 0 chr15 94353276 94353313 -9141661 + AT_rich Low_complexity Low_complexity 1 37 0 5 1304 2881 244 46 84 chr15 94354707 94355716 -9139258 - RCHARR1 DNA MER1_type -2 972 3 5 1304 223 179 36 0 chr15 94356739 94356795 -9138179 + B3A SINE B2 4 61 -137 5 1304 188 140 43 85 chr15 94357098 94357145 -9137829 + MIRm SINE MIR 119 163 -113 5 1304 1133 126 0 14 chr15 94357605 94358057 -9136917 + (TG)n Simple_repeat Simple_repeat 1 445 0 5 1304 234 128 0 0 chr15 94359357 94359396 -9135578 + (CCCCCT)n Simple_repeat Simple_repeat 3 41 0 5 1304 567 198 26 0 chr15 94360442 94360558 -9134416 + RSINE1 SINE B4 4 122 -43 5 1304 1074 56 0 0 chr15 94360605 94360749 -9134225 + B2_Mm2 SINE B2 15 158 -37 5 1304 270 0 0 0 chr15 94360749 94360779 -9134195 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1304 314 91 353 39 chr15 94360952 94361054 -9133920 + B2_Mm2 SINE B2 47 180 -15 5 1304 1810 213 26 13 chr15 94361097 94361298 -9133676 + MTD LTR MaLR 2 198 -221 5 1304 279 0 0 0 chr15 94361298 94361329 -9133645 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1304 1810 213 26 13 chr15 94361329 94361507 -9133467 + MTD LTR MaLR 199 386 -33 5 1304 246 62 0 0 chr15 94362759 94362791 -9132183 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1304 395 259 136 7 chr15 94363204 94363344 -9131630 + RSINE1 SINE B4 6 163 -2 5 1304 1091 200 15 0 chr15 94364225 94364430 -9130544 + B3 SINE B2 3 210 -6 5 1304 4304 109 4 34 chr15 94364653 94365328 -9129646 + Lx3B LINE L1 6319 6973 0 5 1304 209 108 0 26 chr15 94365328 94365366 -9129608 + (TAA)n Simple_repeat Simple_repeat 3 39 0 5 1304 1101 22 15 15 chr15 94365676 94365811 -9129163 + B1_Mus2 SINE Alu 1 135 -12 5 1304 261 0 0 0 chr15 94365811 94365840 -9129134 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 5 1304 581 271 10 30 chr15 94366575 94366773 -9128201 - B3A SINE B2 -4 194 1 5 1304 273 242 63 24 chr15 94367331 94367458 -9127516 + RLTR15 LTR ERVK 31 162 -197 5 1304 286 310 50 96 chr15 94367610 94367828 -9127146 + L1MB3 LINE L1 5961 6168 -15 5 1304 702 168 7 7 chr15 94367853 94367991 -9126983 - URR1B DNA MER1_type 0 225 88 5 1304 739 274 184 11 chr15 94368309 94368656 -9126318 + Lx5 LINE L1 5957 6363 -687 5 1304 1309 296 70 40 chr15 94368685 94369212 -9125762 + Lx5 LINE L1 6507 7049 -1 5 1304 229 286 0 0 chr15 94369512 94369575 -9125399 + ID4 SINE ID 4 66 -17 5 1304 315 0 0 0 chr15 94370042 94370077 -9124897 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1304 468 0 0 0 chr15 94370077 94370128 -9124846 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 20 554 258 29 67 chr15 94371643 94371851 -9123123 + B3 SINE B2 11 210 -6 5 1305 312 273 38 90 chr15 94371860 94371993 -9122981 + MT2B LTR ERVL 153 278 -323 5 1305 862 129 0 14 chr15 94371881 94372022 -9122952 + B1_Mur3 SINE Alu 11 149 0 5 1305 1229 27 0 13 chr15 94372067 94372216 -9122758 + B1_Mus2 SINE Alu 1 147 0 5 1305 220 180 41 92 chr15 94372217 94372280 -9122694 + A-rich Low_complexity Low_complexity 4 63 0 5 1305 516 198 146 31 chr15 94372280 94372410 -9122564 + B1_Mus2 SINE Alu 2 146 -1 5 1305 220 180 41 92 chr15 94372410 94372444 -9122530 + A-rich Low_complexity Low_complexity 64 96 0 5 1305 225 331 160 8 chr15 94373103 94373228 -9121746 + L2a LINE L2 3279 3422 -4 5 1305 22 0 0 0 chr15 94374604 94374626 -9120348 + AT_rich Low_complexity Low_complexity 1 22 0 5 1305 194 0 39 0 chr15 94374811 94374837 -9120137 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1305 836 124 7 16 chr15 94374873 94375014 -9119960 + ORR1A4 LTR MaLR 213 379 0 5 1305 1152 214 88 147 chr15 94375331 94375956 -9119018 - RLTR42-int LTR ERVK -517 5005 4418 5 1305 829 222 91 30 chr15 94376016 94376248 -9118726 - RLTR42-int LTR ERVK -1066 4456 4211 5 1305 230 229 0 20 chr15 94376288 94376337 -9118637 + GA-rich Low_complexity Low_complexity 2 49 0 5 1305 198 405 24 0 chr15 94376629 94376713 -9118261 - L2b LINE L2 -68 3307 3222 5 1305 205 156 44 0 chr15 94377402 94377447 -9117527 + T-rich Low_complexity Low_complexity 2 48 0 5 1305 845 218 67 38 chr15 94377481 94377691 -9117283 + B3 SINE B2 1 216 0 5 1305 977 84 40 34 chr15 94378077 94378225 -9116749 - B1_Mur4 SINE Alu -1 149 1 5 1305 1732 147 106 24 chr15 94379086 94379463 -9115511 - RMER17C LTR ERVK 0 410 3 5 1305 414 241 83 0 chr15 94379740 94379848 -9115126 - ID_B1 SINE B4 -14 210 94 5 1305 243 297 85 85 chr15 94379915 94380114 -9114860 + L1MC4 LINE L1 7403 7601 -441 5 1305 559 254 13 66 chr15 94380438 94380577 -9114397 - B4A SINE B4 0 292 161 5 1305 3384 136 35 152 chr15 94380577 94381358 -9113616 - RMER6C LTR ERVK 0 690 2 5 1305 559 254 13 66 chr15 94381358 94381370 -9113604 - B4A SINE B4 -132 160 149 5 1305 981 148 55 0 chr15 94381359 94381542 -9113432 - URR1A DNA MER1_type -1 225 33 5 1305 592 254 42 68 chr15 94381543 94381733 -9113241 - B4A SINE B4 -106 186 2 5 1305 880 256 19 5 chr15 94381764 94381976 -9112998 - B3 SINE B2 0 216 2 5 1305 309 140 0 0 chr15 94381993 94382050 -9112924 + (CAT)n Simple_repeat Simple_repeat 1 57 0 5 1305 673 201 6 2 chr15 94382934 94383432 -9111542 + (TG)n Simple_repeat Simple_repeat 1 500 0 5 1305 576 279 32 59 chr15 94383444 94383676 -9111298 - ID_B1 SINE B4 0 292 80 5 1305 1955 146 39 22 chr15 94383845 94384202 -9110772 - ORR1B2 LTR MaLR 0 367 5 5 1305 331 358 0 14 chr15 94384665 94384697 -9110277 + ID_B1 SINE B4 80 216 -8 5 1305 366 255 65 9 chr15 94384697 94384804 -9110170 + B1F2 SINE Alu 29 141 -8 5 1305 401 97 14 0 chr15 94384961 94385033 -9109941 + (TG)n Simple_repeat Simple_repeat 2 74 0 5 1305 620 279 36 0 chr15 94385635 94385775 -9109199 + RSINE1 SINE B4 2 146 -19 5 1305 774 149 0 0 chr15 94385799 94385933 -9109041 + (TA)n Simple_repeat Simple_repeat 1 134 0 5 1305 895 133 15 0 chr15 94385933 94386068 -9108906 - B1_Mur3 SINE Alu -11 138 2 5 1305 298 221 51 13 chr15 94386724 94386802 -9108172 - ID4_ SINE ID -1 82 2 5 1305 222 289 16 22 chr15 94386846 94386947 -9108027 - PB1D10 SINE Alu -44 105 3 5 1305 283 286 0 0 chr15 94387403 94387415 -9107559 + B4A SINE B4 76 87 -205 5 1305 638 248 22 0 chr15 94387415 94387552 -9107422 + B1F1 SINE Alu 3 142 -7 5 1305 186 71 0 0 chr15 94387554 94387582 -9107392 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 5 1305 211 316 0 0 chr15 94389696 94389753 -9105221 - L2b LINE L2 -221 3154 3098 5 1305 294 29 0 0 chr15 94390883 94390918 -9104056 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1305 310 239 116 27 chr15 94391044 94391156 -9103818 + L1MA4 LINE L1 5886 6007 -293 5 1305 21 0 0 0 chr15 94391473 94391494 -9103480 + AT_rich Low_complexity Low_complexity 1 21 0 5 1305 225 141 54 40 chr15 94391727 94391801 -9103173 + (TA)n Simple_repeat Simple_repeat 1 75 0 5 1305 671 224 18 66 chr15 94392101 94392268 -9102706 - RSINE1 SINE B4 -3 162 4 5 1305 1939 107 9 59 chr15 94392342 94392681 -9102293 + RLTRETN_Mm LTR ERVK 1 322 0 5 1305 1189 62 0 0 chr15 94393088 94393234 -9101740 + B1_Mus2 SINE Alu 2 147 0 6 1305 415 282 39 33 chr15 94394267 94394447 -9100527 + B3A SINE B2 2 182 -16 6 1305 1374 61 61 0 chr15 94394718 94394899 -9100075 + B2_Mm1a SINE B2 2 193 0 6 1305 303 220 250 0 chr15 94395043 94395143 -9099831 + RSINE1 SINE B4 2 126 -39 6 1305 239 320 0 13 chr15 94395198 94395274 -9099700 + ID4 SINE ID 6 80 -3 6 1305 513 0 0 0 chr15 94395754 94395811 -9099163 + (TC)n Simple_repeat Simple_repeat 2 58 0 6 1305 1165 82 0 0 chr15 94395811 94395957 -9099017 - B1_Mus2 SINE Alu -1 146 1 6 1305 254 256 206 8 chr15 94395957 94396083 -9098891 - MLT1C LTR MaLR -35 432 282 6 1305 315 0 0 0 chr15 94396168 94396203 -9098771 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1305 1104 266 50 27 chr15 94396270 94396617 -9098357 - ORR1D2 LTR MaLR 0 370 23 6 1305 794 121 0 0 chr15 94397831 94397955 -9097019 - B1_Mus2 SINE Alu -12 135 12 6 1305 450 136 52 104 chr15 94397854 94397969 -9097005 - MT2B LTR ERVL -337 264 156 6 1305 450 272 9 144 chr15 94397989 94398204 -9096770 + RMER15 LTR ERVL 367 552 -23 6 1305 677 338 45 58 chr15 94398238 94398568 -9096406 + RMER15-int LTR ERVL 18 343 -4656 6 1305 519 17 0 0 chr15 94398736 94398796 -9096178 + (GAAA)n Simple_repeat Simple_repeat 1 60 0 6 1305 380 208 0 0 chr15 94398808 94398880 -9096094 + PB1D9 SINE Alu 24 95 -25 6 1305 201 180 0 0 chr15 94398881 94398931 -9096043 + CT-rich Low_complexity Low_complexity 1 50 0 6 1305 2989 199 87 43 chr15 94398945 94399715 -9095259 + RLTR40 LTR ERVK 2 805 -12 6 1305 225 0 0 0 chr15 94399855 94399880 -9095094 + (GGA)n Simple_repeat Simple_repeat 2 26 0 6 1305 3136 47 13 3 chr15 94399959 94400340 -9094634 + IAPEY_LTR LTR ERVK 1 385 0 6 1305 1427 277 68 0 chr15 94400367 94400764 -9094210 + RMER15-int LTR ERVL 906 1329 -3670 6 1305 740 290 81 87 chr15 94401582 94402088 -9092886 + RMER15-int LTR ERVL 1349 1851 -3148 6 1305 301 256 76 88 chr15 94402271 94402442 -9092532 - RMER15-int LTR ERVL -3434 1565 1397 6 1305 924 166 63 110 chr15 94402603 94402904 -9092070 + Lx5 LINE L1 6783 7058 0 6 1305 823 264 89 17 chr15 94402899 94403476 -9091498 + Lx8 LINE L1 3049 3735 -2408 6 1305 180 0 0 0 chr15 94403491 94403511 -9091463 + (C)n Simple_repeat Simple_repeat 1 20 0 6 1305 285 329 0 0 chr15 94403523 94403602 -9091372 + RSINE1 SINE B4 34 112 -53 6 1305 297 0 0 0 chr15 94403604 94403637 -9091337 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1305 317 248 129 8 chr15 94403637 94403765 -9091209 + Lx8 LINE L1 5298 5466 -834 6 1305 600 263 0 0 chr15 94403771 94403950 -9091024 + (TA)n Simple_repeat Simple_repeat 1 179 0 6 1305 295 207 17 0 chr15 94403951 94404009 -9090965 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1305 769 275 133 35 chr15 94404009 94404485 -9090489 + Lx8 LINE L1 5429 5972 -1672 6 1305 835 224 54 5 chr15 94404559 94404743 -9090231 + B3A SINE B2 2 194 -4 6 1305 537 44 0 0 chr15 94404903 94404971 -9090003 + (TGAA)n Simple_repeat Simple_repeat 3 70 0 6 1305 617 252 19 0 chr15 94405033 94405188 -9089786 + Lx8 LINE L1 6316 6473 -1000 6 1305 2742 144 16 31 chr15 94405276 94405791 -9089183 - RMER15 LTR ERVL 0 575 69 6 1305 370 289 24 32 chr15 94405901 94406026 -9088948 - B4 SINE B4 -39 126 2 6 1305 364 249 75 188 chr15 94406033 94406246 -9088728 + Lx8 LINE L1 7076 7264 -209 6 1305 238 292 136 40 chr15 94407684 94407809 -9087165 - RSINE1 SINE B4 -7 158 22 6 1305 293 93 0 18 chr15 94409417 94409472 -9085502 + (CAAAAA)n Simple_repeat Simple_repeat 1 54 0 6 1305 250 238 229 8 chr15 94411064 94411195 -9083779 + MER3 DNA MER1_type 34 193 -16 6 1305 3025 171 70 24 chr15 94411884 94412586 -9082388 + RMER12 LTR ERVK 1 734 -588 6 1305 941 251 106 33 chr15 94412623 94412982 -9081992 + RMER12 LTR ERVK 938 1322 0 6 1305 22 0 0 0 chr15 94415130 94415152 -9079822 + GC_rich Low_complexity Low_complexity 1 22 0 6 1305 585 215 0 32 chr15 94415639 94415793 -9079181 - B1_Mur3 SINE Alu 0 149 1 6 1305 276 30 0 0 chr15 94416731 94416764 -9078210 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 6 1305 22 0 0 0 chr15 94417200 94417222 -9077752 + AT_rich Low_complexity Low_complexity 1 22 0 6 1305 195 100 0 0 chr15 94420459 94420489 -9074485 + (C)n Simple_repeat Simple_repeat 1 30 0 6 1305 649 254 62 78 chr15 94420812 94421120 -9073854 - RMER5 LTR ERV1 -10 524 222 6 1305 27 0 0 0 chr15 94421644 94421671 -9073303 + AT_rich Low_complexity Low_complexity 1 27 0 6 1305 712 154 7 22 chr15 94422293 94422432 -9072542 - B1_Mur3 SINE Alu -2 147 11 6 1305 270 0 0 0 chr15 94422539 94422569 -9072405 + (A)n Simple_repeat Simple_repeat 1 30 0 6 1305 286 282 81 9 chr15 94423494 94423605 -9071369 - Charlie8 DNA MER1_type -2193 235 117 6 1305 215 203 17 0 chr15 94423668 94423727 -9071247 + (TA)n Simple_repeat Simple_repeat 2 61 0 6 1305 208 239 60 0 chr15 94423764 94423831 -9071143 + (CATATA)n Simple_repeat Simple_repeat 1 71 0 6 1305 741 139 0 0 chr15 94423850 94423972 -9071002 + (TA)n Simple_repeat Simple_repeat 1 122 0 6 1305 244 30 0 0 chr15 94424022 94424055 -9070919 - RMER19C LTR ERVK -578 33 1 6 1305 843 235 43 9 chr15 94424095 94424326 -9070648 + ID_B1 SINE B4 10 246 -46 6 1305 1142 107 6 0 chr15 94425177 94425354 -9069620 + (TTC)n Simple_repeat Simple_repeat 3 180 0 6 1305 800 125 13 40 chr15 94425570 94425720 -9069254 - B1_Mm SINE Alu 0 147 2 6 1305 345 197 0 0 chr15 94425755 94425826 -9069148 + GA-rich Low_complexity Low_complexity 1 71 0 6 1305 967 123 6 6 chr15 94425835 94425999 -9068975 + (GAA)n Simple_repeat Simple_repeat 1 164 0 6 1305 340 326 32 0 chr15 94426276 94426371 -9068603 + ID_B1 SINE B4 113 210 -14 6 1305 752 234 55 37 chr15 94426402 94426619 -9068355 + ID_B1 SINE B4 1 221 -3 6 1305 36 53 0 0 chr15 94427223 94427280 -9067694 + AT_rich Low_complexity Low_complexity 1 57 0 6 1305 534 163 0 0 chr15 94427502 94427600 -9067374 + (TA)n Simple_repeat Simple_repeat 2 99 0 6 1305 477 241 17 0 chr15 94428156 94428272 -9066702 + B1F SINE Alu 30 147 -2 6 1305 234 0 0 0 chr15 94428597 94428623 -9066351 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1305 1186 234 76 0 chr15 94429562 94429904 -9065070 + MTD LTR MaLR 52 419 0 6 1305 294 323 16 31 chr15 94430096 94430224 -9064750 + MIRb SINE MIR 35 160 -108 6 1305 32 0 0 0 chr15 94433466 94433498 -9061476 + AT_rich Low_complexity Low_complexity 1 32 0 6 1305 199 234 110 61 chr15 94433593 94433675 -9061299 - L3 LINE CR1 -890 3599 3514 6 1305 237 98 0 0 chr15 94434357 94434398 -9060576 + (T)n Simple_repeat Simple_repeat 1 41 0 6 1305 204 330 0 0 chr15 94435341 94435429 -9059545 + (TTAGGG)n Simple_repeat Simple_repeat 1 88 0 6 1305 566 174 0 0 chr15 94435432 94435530 -9059444 + B1_Mur2 SINE Alu 42 139 -10 6 1305 190 100 66 16 chr15 94435533 94435594 -9059380 + (TA)n Simple_repeat Simple_repeat 1 64 0 6 1305 204 40 0 0 chr15 94435596 94435621 -9059353 + (TATAA)n Simple_repeat Simple_repeat 5 29 0 6 1305 363 320 56 98 chr15 94435986 94436136 -9058838 + B4A SINE B4 1 147 -145 6 1305 654 13 0 0 chr15 94436136 94436211 -9058763 + (GA)n Simple_repeat Simple_repeat 2 76 0 6 1305 363 320 56 98 chr15 94436211 94436365 -9058609 + B4A SINE B4 148 292 0 6 1305 477 0 0 0 chr15 94436585 94436638 -9058336 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1305 727 122 15 8 chr15 94436655 94436787 -9058187 + Lx4A LINE L1 6919 7051 -7 6 1305 222 118 0 0 chr15 94436801 94436835 -9058139 + (TATG)n Simple_repeat Simple_repeat 2 35 0 6 1305 476 115 19 19 chr15 94437961 94438067 -9056907 + (TA)n Simple_repeat Simple_repeat 1 106 0 6 1305 238 273 47 66 chr15 94438259 94438365 -9056609 - MER5A DNA MER1_type -3 186 83 6 1305 962 278 94 30 chr15 94438612 94438983 -9055991 + MTD LTR MaLR 8 402 -17 6 1305 2006 97 25 48 chr15 94439065 94439421 -9055553 - RLTR10B2 LTR ERVK 0 365 18 6 1305 320 24 0 0 chr15 94439471 94439513 -9055461 - RLTR10B2 LTR ERVK -250 42 1 6 1305 7703 48 2 28 chr15 94439513 94440469 -9054505 - MMERVK10C-int LTR ERVK 0 7581 6651 6 1305 36639 39 1 0 chr15 94440460 94445402 -9049572 - MMERVK10C-int LTR ERVK -1771 5810 870 6 1305 1462 103 20 16 chr15 94445400 94445713 -9049261 - MMERVK10C-int LTR ERVK -7182 399 1 6 1305 2044 75 87 39 chr15 94445713 94446045 -9048929 - RLTR10B2 LTR ERVK 0 365 18 6 1305 259 29 0 0 chr15 94446095 94446129 -9048845 - RLTR10B2 LTR ERVK -250 42 9 6 1305 292 0 50 0 chr15 94446137 94446177 -9048797 - RLTR10B LTR ERVK -250 42 1 6 1305 500 348 12 24 chr15 94446177 94446342 -9048632 - ID_B1 SINE B4 -61 163 1 6 1305 3986 143 54 26 chr15 94446534 94447199 -9047775 - RMER19B LTR ERVK -194 708 25 6 1305 1027 213 162 64 chr15 94447765 94448212 -9046762 - RMER4B LTR ERVK -24 561 17 6 1305 466 308 123 41 chr15 94448399 94448643 -9046331 + MLT1C LTR MaLR 146 409 -58 6 1305 475 305 82 102 chr15 94448685 94449087 -9045887 + RLTR11A2 LTR ERVK 116 509 -18 6 1305 4628 30 11 2 chr15 94449723 94450285 -9044689 - L1Md_F3 LINE L1 0 6584 6039 6 1305 234 62 0 0 chr15 94451082 94451114 -9043860 + (GA)n Simple_repeat Simple_repeat 2 33 0 6 1305 974 71 8 0 chr15 94451114 94451240 -9043734 + B1_Mm SINE Alu 19 145 -2 6 1305 248 70 0 23 chr15 94451240 94451284 -9043690 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 6 1305 297 0 0 0 chr15 94451293 94451326 -9043648 + (GA)n Simple_repeat Simple_repeat 2 34 0 6 1305 235 183 0 24 chr15 94451715 94451799 -9043175 + CT-rich Low_complexity Low_complexity 1 82 0 6 1305 847 249 53 5 chr15 94451802 94451992 -9042982 - ID_B1 SINE B4 -21 203 5 6 1305 968 133 49 22 chr15 94452186 94452370 -9042604 + B2_Mm2 SINE B2 1 189 -6 6 1305 1667 173 138 0 chr15 94452466 94452807 -9042167 - MTD LTR MaLR -14 405 18 6 1305 253 253 11 0 chr15 94452810 94452897 -9042077 + (CAA)n Simple_repeat Simple_repeat 3 90 0 6 1305 2397 132 5 14 chr15 94453110 94453479 -9041495 - ORR1B2 LTR MaLR -1 366 1 6 1305 513 333 75 21 chr15 94453878 94454157 -9040817 - Lx8 LINE L1 -181 7292 6999 6 1305 360 0 0 0 chr15 94454158 94454198 -9040776 + (TC)n Simple_repeat Simple_repeat 1 40 0 6 1305 532 156 8 8 chr15 94454198 94454327 -9040647 + (CA)n Simple_repeat Simple_repeat 2 130 0 6 1305 3042 81 2 5 chr15 94454340 94454737 -9040237 - MTA_Mm LTR MaLR 0 396 1 6 1305 259 357 67 40 chr15 94454746 94454895 -9040079 - MT2A LTR ERVL -76 457 305 6 1305 6507 129 68 19 chr15 94455066 94456195 -9038779 - Lx2 LINE L1 0 6997 5813 7 1305 192 227 22 22 chr15 94456692 94456737 -9038237 - L2c LINE L2 -13 3374 3330 7 1305 1232 48 0 0 chr15 94457198 94457345 -9037629 - B1_Mus2 SINE Alu 0 147 1 7 1305 324 0 0 0 chr15 94457907 94457943 -9037031 + (TGG)n Simple_repeat Simple_repeat 1 36 0 7 1305 347 283 7 46 chr15 94458555 94458707 -9036267 + (TATG)n Simple_repeat Simple_repeat 2 147 0 7 1305 189 274 0 0 chr15 94458754 94458816 -9036158 + (CATATA)n Simple_repeat Simple_repeat 5 66 0 7 1305 417 263 0 18 chr15 94458835 94459118 -9035856 + (CATATA)n Simple_repeat Simple_repeat 1 277 0 7 1305 519 228 0 0 chr15 94459120 94459269 -9035705 + (CA)n Simple_repeat Simple_repeat 2 150 0 7 1305 315 113 0 0 chr15 94459453 94459506 -9035468 + (CCCTG)n Simple_repeat Simple_repeat 3 55 0 7 1305 23 78 0 0 chr15 94459801 94459852 -9035122 + GC_rich Low_complexity Low_complexity 1 51 0 7 1305 516 16 0 0 chr15 94460162 94460223 -9034751 + (TG)n Simple_repeat Simple_repeat 1 61 0 7 1305 212 174 22 0 chr15 94460398 94460444 -9034530 + (TCCA)n Simple_repeat Simple_repeat 3 49 0 7 1305 195 212 72 77 chr15 94461691 94461782 -9033192 + MIRb SINE MIR 155 250 -18 7 1305 318 26 0 0 chr15 94461920 94461959 -9033015 + (CTG)n Simple_repeat Simple_repeat 1 39 0 7 1305 456 19 0 0 chr15 94461959 94462012 -9032962 + (TCC)n Simple_repeat Simple_repeat 3 55 0 7 1305 999 161 0 0 chr15 94462540 94462720 -9032254 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 7 1305 927 141 20 7 chr15 94462759 94463214 -9031760 + (TCCA)n Simple_repeat Simple_repeat 1 461 0 7 1305 182 395 38 19 chr15 94463975 94464135 -9030839 + MIRb SINE MIR 98 260 -8 7 1305 182 313 77 88 chr15 94465015 94465197 -9029777 + MIRb SINE MIR 51 230 -38 7 1305 792 35 8 17 chr15 94465485 94465602 -9029372 - L1Md_F3 LINE L1 -14 6570 6455 7 1305 2776 61 3 6 chr15 94465602 94465941 -9029033 + L1Md_F3 LINE L1 6109 6448 -136 7 1305 207 288 13 52 chr15 94466587 94466664 -9028310 + MIR SINE MIR 106 179 -83 7 1305 210 105 0 0 chr15 94466726 94466764 -9028210 + (T)n Simple_repeat Simple_repeat 1 38 0 7 1305 421 172 19 123 chr15 94467044 94467150 -9027824 + MT2B LTR ERVL 166 260 -341 7 1305 815 154 21 29 chr15 94467055 94467195 -9027779 + B1_Mur3 SINE Alu 11 149 0 7 1305 252 77 0 0 chr15 94467291 94467330 -9027644 + (T)n Simple_repeat Simple_repeat 1 39 0 7 1305 189 0 0 0 chr15 94467448 94467469 -9027505 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1305 189 0 0 0 chr15 94467725 94467746 -9027228 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 7 1305 580 248 25 0 chr15 94467750 94467871 -9027103 - ID_B1 SINE B4 -19 205 82 7 1305 255 245 28 122 chr15 94467778 94467885 -9027089 - MT2B2 LTR ERVL -332 252 156 7 1305 1157 109 40 17 chr15 94467915 94468092 -9026882 - B2_Mm2 SINE B2 -14 181 1 7 1305 862 157 0 48 chr15 94468148 94468295 -9026679 + B1_Mus1 SINE Alu 3 142 -6 7 1305 23 0 0 0 chr15 94468299 94468322 -9026652 + AT_rich Low_complexity Low_complexity 1 23 0 7 1305 468 281 59 40 chr15 94469268 94469420 -9025554 - RSINE1 SINE B4 0 165 11 7 1305 648 38 0 0 chr15 94469510 94469589 -9025385 + (TA)n Simple_repeat Simple_repeat 2 80 0 7 1305 872 179 109 86 chr15 94469692 94469912 -9025062 - URR1A DNA MER1_type -1 225 1 7 1305 472 236 197 20 chr15 94469912 94470059 -9024915 + B3 SINE B2 44 216 0 7 1305 194 341 42 42 chr15 94470337 94470432 -9024542 - L2c LINE L2 -33 3354 3260 7 1305 310 244 24 12 chr15 94472683 94472766 -9022208 - PB1D10 SINE Alu -13 104 21 7 1305 46 33 0 0 chr15 94473006 94473066 -9021908 + AT_rich Low_complexity Low_complexity 1 60 0 7 1305 2207 128 49 111 chr15 94474038 94474291 -9020683 - MTC LTR MaLR 0 421 202 7 1305 306 0 0 0 chr15 94474298 94474332 -9020642 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 1305 975 86 57 7 chr15 94474332 94474464 -9020510 - B1_Mus1 SINE Alu -8 140 1 7 1305 2207 128 49 111 chr15 94474464 94474659 -9020315 - MTC LTR MaLR -220 201 1 7 1305 373 251 105 45 chr15 94474660 94474860 -9020114 + L2a LINE L2 3215 3426 0 7 1305 642 122 0 36 chr15 94475564 94476013 -9018961 + (TGGA)n Simple_repeat Simple_repeat 1 432 0 7 1305 504 48 0 0 chr15 94476738 94476801 -9018173 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 1305 207 100 0 0 chr15 94476840 94476870 -9018104 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 1305 255 31 0 0 chr15 94478017 94478049 -9016925 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 7 1305 2560 159 11 13 chr15 94478049 94478496 -9016478 - Lx LINE L1 -16 6638 6193 7 1305 492 211 97 23 chr15 94480776 94480879 -9014095 - Lx7 LINE L1 -4 7692 7579 7 1305 864 108 0 0 chr15 94480879 94481009 -9013965 + (TC)n Simple_repeat Simple_repeat 1 130 0 7 1305 492 211 97 23 chr15 94481009 94481080 -9013894 - Lx7 LINE L1 -118 7578 7506 7 1305 206 372 0 0 chr15 94481977 94482055 -9012919 - L2a LINE L2 -273 3153 3076 7 1305 299 263 59 66 chr15 94482408 94482430 -9012544 - B1F SINE Alu -16 133 63 7 1305 299 286 24 0 chr15 94482430 94482514 -9012460 - ID_B1 SINE B4 -29 195 110 7 1305 299 263 59 66 chr15 94482514 94482527 -9012447 - B1F SINE Alu -16 62 14 7 1305 205 350 15 54 chr15 94483157 94483287 -9011687 - L2a LINE L2 -3 3423 3299 7 1305 491 195 0 9 chr15 94483642 94483874 -9011100 + (TG)n Simple_repeat Simple_repeat 1 229 0 7 1305 488 278 92 6 chr15 94483909 94484072 -9010902 - B3A SINE B2 -19 179 3 7 1305 245 295 80 9 chr15 94484110 94484223 -9010751 + L1M5 LINE L1 2955 3075 -3071 7 1305 399 305 117 54 chr15 94484458 94484697 -9010277 + L1M5 LINE L1 3133 3386 -2760 7 1305 544 274 75 19 chr15 94484776 94484936 -9010038 - B4A SINE B4 -2 290 122 7 1305 797 217 28 79 chr15 94487540 94487755 -9007219 + B3 SINE B2 4 207 -9 7 1305 797 205 86 11 chr15 94487779 94487966 -9007008 + ID_B1 SINE B4 12 212 -12 7 1305 466 211 149 78 chr15 94487985 94488139 -9006835 - RSINE1 SINE B4 0 165 1 7 1305 303 122 0 0 chr15 94488910 94488959 -9006015 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1305 585 264 31 0 chr15 94490092 94490221 -9004753 - RSINE1 SINE B4 -2 163 31 7 1305 502 122 19 0 chr15 94490681 94490788 -9004186 + (GGGA)n Simple_repeat Simple_repeat 3 111 0 7 1305 233 0 62 0 chr15 94490892 94490924 -9004050 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 7 1305 280 220 0 0 chr15 94491649 94491708 -9003266 + MER33 DNA MER1_type 158 216 -108 7 1305 23 0 0 0 chr15 94492287 94492310 -9002664 + AT_rich Low_complexity Low_complexity 1 23 0 7 1305 395 295 0 21 chr15 94492483 94492580 -9002394 + PB1D7 SINE Alu 24 118 -2 7 1305 351 407 32 9 chr15 94494661 94494877 -9000097 + MIRb SINE MIR 48 268 0 7 1305 719 262 69 0 chr15 94494935 94495137 -8999837 - ID_B1 SINE B4 -4 220 5 7 1305 306 261 87 0 chr15 94495152 94495221 -8999753 - ID4 SINE ID -2 81 7 7 1305 948 152 43 38 chr15 94495534 94495718 -8999256 - B2_Mm2 SINE B2 -10 185 1 7 1305 444 287 48 152 chr15 94495898 94496128 -8998846 - B4A SINE B4 -84 208 3 7 1305 763 274 143 71 chr15 94496257 94496556 -8998418 - ORR1E LTR MaLR 0 359 36 7 1305 1173 168 22 31 chr15 94496556 94496783 -8998191 - URR1B DNA MER1_type 0 225 1 7 1305 763 274 143 71 chr15 94496783 94496805 -8998169 - ORR1E LTR MaLR -324 35 15 7 1305 300 311 134 58 chr15 94496790 94497132 -8997842 - LTR16A LTR ERVL -20 431 64 7 1305 246 358 0 0 chr15 94497769 94497864 -8997110 - L2a LINE L2 -20 3406 3312 7 1305 1075 189 90 24 chr15 94497909 94498120 -8996854 - URR1B DNA MER1_type 0 225 1 7 1305 762 315 76 86 chr15 94498495 94499064 -8995910 - MER68 LTR ERVL 0 563 1 7 1305 414 0 0 0 chr15 94499177 94499223 -8995751 + (TC)n Simple_repeat Simple_repeat 1 46 0 7 1305 237 265 115 19 chr15 94499223 94499327 -8995647 - RMER4B LTR ERVK -32 553 440 7 1305 281 227 0 83 chr15 94499456 94499528 -8995446 - B4 SINE B4 -4 288 223 7 1305 213 39 0 0 chr15 94500067 94500093 -8994881 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 1305 269 64 43 0 chr15 94500096 94500143 -8994831 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 2 1305 464 258 54 8 chr15 94500143 94500272 -8994702 - B1F SINE Alu -12 137 3 3 1305 263 321 76 8 chr15 94500798 94500930 -8994044 + MLT1M LTR MaLR 58 198 -474 4 1306 267 31 0 0 chr15 94503542 94503574 -8991400 + (TTGG)n Simple_repeat Simple_repeat 3 34 0 5 1306 553 279 47 36 chr15 94504320 94504513 -8990461 + B3A SINE B2 4 198 0 6 1306 393 22 0 0 chr15 94504605 94504651 -8990323 + (GGAA)n Simple_repeat Simple_repeat 1 46 0 7 1306 549 276 154 37 chr15 94504691 94504879 -8990095 + ID_B1 SINE B4 3 212 -12 8 1306 206 105 26 0 chr15 94505065 94505103 -8989871 + (TTTTC)n Simple_repeat Simple_repeat 4 42 0 9 1306 234 229 82 0 chr15 94505241 94505302 -8989672 - L1M4 LINE L1 -604 5574 5509 1 1306 1940 159 32 0 chr15 94505520 94505866 -8989108 - ORR1C1 LTR MaLR 0 378 22 1 1306 710 188 8 15 chr15 94507257 94507523 -8987451 + (CATATA)n Simple_repeat Simple_repeat 1 264 0 1 1306 309 246 0 15 chr15 94507523 94507589 -8987385 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 1306 197 210 16 0 chr15 94508418 94508480 -8986494 + (TCTG)n Simple_repeat Simple_repeat 2 64 0 1 1306 784 188 7 20 chr15 94508483 94508630 -8986344 - B1_Mur4 SINE Alu -1 149 5 1 1306 234 268 0 0 chr15 94510111 94510167 -8984807 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 1 1306 3035 196 191 51 chr15 94510211 94511345 -8983629 - RMER1A Other Other -10 1020 2 1 1306 3105 74 5 0 chr15 94511862 94512256 -8982718 + MTA_Mm LTR MaLR 1 396 0 1 1306 525 202 212 6 chr15 94512453 94512632 -8982342 + B3 SINE B2 1 216 0 1 1306 219 36 0 0 chr15 94512660 94512688 -8982286 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 1306 201 225 209 22 chr15 94512709 94512800 -8982174 + L2a LINE L2 3305 3412 -14 2 1306 2433 70 41 0 chr15 94513050 94513364 -8981610 + ORR1A2 LTR MaLR 1 327 0 2 1306 386 230 5 0 chr15 94513787 94513880 -8981094 + B1_Mur1 SINE Alu 35 129 -20 2 1306 1845 156 21 6 chr15 94515508 94515843 -8979131 - ORR1B1 LTR MaLR -11 383 44 2 1306 306 0 0 0 chr15 94515938 94515972 -8979002 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1306 894 35 0 0 chr15 94515972 94516085 -8978889 + (GA)n Simple_repeat Simple_repeat 1 114 0 2 1306 518 235 0 22 chr15 94516138 94516273 -8978701 - L1M3 LINE L1 -556 5612 5481 2 1306 2458 98 108 62 chr15 94516282 94516715 -8978259 - RLTR11B LTR ERVK 0 453 1 2 1306 355 176 0 0 chr15 94516726 94516794 -8978180 + B1_Mur3 SINE Alu 31 98 -51 2 1306 392 97 16 0 chr15 94516794 94516856 -8978118 + (GA)n Simple_repeat Simple_repeat 2 64 0 3 1306 1335 207 102 35 chr15 94517685 94518056 -8976918 + MTD LTR MaLR 42 402 -17 3 1306 187 333 40 13 chr15 94518426 94518502 -8976472 + MIRc SINE MIR 22 99 -169 3 1306 468 0 0 0 chr15 94518843 94518895 -8976079 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 1306 833 297 130 41 chr15 94519936 94520421 -8974553 - Lx8 LINE L1 -1 7472 6945 3 1306 252 0 0 0 chr15 94520648 94520676 -8974298 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 1306 36039 70 6 10 chr15 94521873 94528108 -8966866 - L1Md_F2 LINE L1 -2 6580 366 3 1306 289 100 49 24 chr15 94528627 94528709 -8966265 + T-rich Low_complexity Low_complexity 6 89 0 3 1306 1013 66 72 7 chr15 94528709 94528847 -8966127 - B1_Mm SINE Alu 0 147 1 3 1306 828 280 98 7 chr15 94529128 94529423 -8965551 + MTE2b LTR MaLR 13 334 -45 3 1306 230 261 120 43 chr15 94529600 94529830 -8965144 - L1M1 LINE L1 -374 5929 5692 4 1306 3300 41 20 0 chr15 94529894 94530286 -8964688 - MTB LTR MaLR 0 400 1 4 1306 647 249 132 0 chr15 94530311 94530451 -8964523 - L1M2 LINE L1 -619 5537 5382 4 1306 234 0 0 0 chr15 94530451 94530477 -8964497 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 1306 647 225 213 0 chr15 94530477 94530616 -8964358 - L1M2 LINE L1 -775 5381 5210 4 1306 708 282 204 24 chr15 94530780 94531289 -8963685 - L1M2 LINE L1 -928 5215 4615 4 1306 335 127 16 0 chr15 94531331 94531394 -8963580 + (CATA)n Simple_repeat Simple_repeat 4 67 0 4 1306 1179 249 55 86 chr15 94532553 94533062 -8961912 + RLTR42-int LTR ERVK 2323 2851 -2671 4 1306 181 261 0 61 chr15 94533062 94533111 -8961863 - MIR SINE MIR -129 79 34 4 1306 365 221 0 34 chr15 94535854 94535943 -8959031 - RMER30 DNA MER1_type -115 87 2 4 1306 21 36 0 0 chr15 94537347 94537375 -8957599 + AT_rich Low_complexity Low_complexity 1 28 0 4 1306 3278 194 57 71 chr15 94537599 94538467 -8956507 - RLTR13A LTR ERVK 0 855 1 4 1306 296 269 10 51 chr15 94540540 94540638 -8954336 - MLT1A1 LTR MaLR 0 408 315 5 1306 2961 89 8 5 chr15 94541209 94541606 -8953368 + MTB LTR MaLR 1 398 -2 5 1306 25 31 0 0 chr15 94542505 94542537 -8952437 + AT_rich Low_complexity Low_complexity 1 32 0 5 1306 536 247 125 39 chr15 94542890 94543122 -8951852 - B4A SINE B4 -40 252 1 5 1306 491 248 67 10 chr15 94543326 94543479 -8951495 - B3A SINE B2 -44 172 3 5 1306 612 169 0 0 chr15 94543734 94543888 -8951086 + GA-rich Low_complexity Low_complexity 2 155 0 5 1306 324 48 0 0 chr15 94543888 94543930 -8951044 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1306 450 0 0 0 chr15 94543930 94543980 -8950994 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1306 558 41 0 0 chr15 94545584 94545657 -8949317 + (TTTC)n Simple_repeat Simple_repeat 2 74 0 5 1306 245 229 0 0 chr15 94545874 94545935 -8949039 - PB1D10 SINE Alu 0 117 57 5 1306 180 0 0 0 chr15 94547580 94547600 -8947374 + (A)n Simple_repeat Simple_repeat 1 20 0 6 1306 1261 167 18 9 chr15 94547984 94548207 -8946767 + URR1B DNA MER1_type 1 225 0 6 1306 186 43 0 0 chr15 94548381 94548404 -8946570 + (CCAA)n Simple_repeat Simple_repeat 1 23 0 6 1306 366 23 0 0 chr15 94548404 94548447 -8946527 + (CAAAC)n Simple_repeat Simple_repeat 2 44 0 6 1306 2508 158 22 2 chr15 94549151 94549564 -8945410 + MTC LTR MaLR 1 421 0 6 1306 2475 46 26 0 chr15 94550194 94550497 -8944477 - RLTR10E LTR ERVK 0 311 1 6 1306 8639 128 34 40 chr15 94550691 94552345 -8942629 - Lx4B LINE L1 -15 7043 5382 6 1306 5899 133 32 3 chr15 94552343 94553309 -8941665 + L1_Mur2 LINE L1 4213 5206 -671 6 1306 533 253 266 51 chr15 94553663 94554081 -8940893 - Lx9 LINE L1 -3 7641 7134 6 1306 275 226 136 10 chr15 94554118 94554221 -8940753 - B3 SINE B2 -100 116 1 6 1306 435 31 0 151 chr15 94554883 94555308 -8939666 + (AGGTG)n Simple_repeat Simple_repeat 1 360 0 7 1306 293 34 0 160 chr15 94555327 94555540 -8939434 + (AGGTG)n Simple_repeat Simple_repeat 2 180 0 7 1306 3330 112 20 4 chr15 94555739 94556231 -8938743 - Lx LINE L1 -7 6647 6148 7 1306 579 15 0 0 chr15 94556266 94556334 -8938640 + (TG)n Simple_repeat Simple_repeat 2 69 0 7 1306 712 239 19 0 chr15 94556334 94556493 -8938481 + B3 SINE B2 9 170 -46 7 1306 919 260 67 34 chr15 94556495 94556762 -8938212 - B4A SINE B4 -16 276 1 7 1306 194 123 52 17 chr15 94557488 94557546 -8937428 + GA-rich Low_complexity Low_complexity 4 63 0 7 1306 324 275 29 51 chr15 94557838 94557976 -8936998 - B1F SINE Alu -13 136 2 7 1306 396 0 0 0 chr15 94558779 94558823 -8936151 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 1306 395 167 9 36 chr15 94559885 94559997 -8934977 + CT-rich Low_complexity Low_complexity 4 112 0 7 1306 777 282 71 26 chr15 94560024 94560290 -8934684 - B4A SINE B4 -13 279 2 7 1306 1258 315 9 6 chr15 94560411 94560750 -8934224 + MTE2b LTR MaLR 1 340 -39 8 1306 1189 88 6 0 chr15 94561349 94561520 -8933454 + B2_Mm1t SINE B2 2 173 -20 8 1306 476 227 0 0 chr15 94562928 94563016 -8931958 + Lx9 LINE L1 6605 6692 -952 8 1306 339 224 0 13 chr15 94563622 94563699 -8931275 - PB1D9 SINE Alu -43 77 2 8 1306 2595 140 34 5 chr15 94564012 94564421 -8930553 - MTC LTR MaLR 0 421 1 8 1306 321 257 298 18 chr15 94565622 94565840 -8929134 + L1MB1 LINE L1 5888 6166 -2 8 1306 271 338 0 83 chr15 94565867 94565951 -8929023 + ID4 SINE ID 1 77 -6 8 1306 534 239 0 0 chr15 94565951 94566085 -8928889 + (TA)n Simple_repeat Simple_repeat 1 134 0 8 1306 261 0 0 0 chr15 94566085 94566114 -8928860 + (CA)n Simple_repeat Simple_repeat 1 29 0 8 1306 718 262 132 8 chr15 94566360 94566618 -8928356 + B4A SINE B4 1 290 -2 8 1306 356 306 46 95 chr15 94567334 94567765 -8927209 - L1M2 LINE L1 -674 5509 5083 9 1306 547 246 69 119 chr15 94567869 94568129 -8926845 - L1M2 LINE L1 -1216 4924 4676 9 1306 408 20 0 0 chr15 94568129 94568178 -8926796 + (TG)n Simple_repeat Simple_repeat 2 50 0 9 1306 580 247 29 20 chr15 94568178 94568353 -8926621 - L1M2 LINE L1 -1469 4677 4516 9 1306 299 234 46 9 chr15 94568636 94568744 -8926230 + (TA)n Simple_repeat Simple_repeat 1 112 0 9 1306 272 146 0 35 chr15 94568769 94568826 -8926148 + (CATATA)n Simple_repeat Simple_repeat 6 60 0 9 1306 406 186 23 35 chr15 94568886 94569059 -8925915 + (CATATA)n Simple_repeat Simple_repeat 4 174 0 9 1306 230 283 0 0 chr15 94569060 94569113 -8925861 + (CA)n Simple_repeat Simple_repeat 2 54 0 9 1306 185 306 0 61 chr15 94569443 94569509 -8925465 + L2a LINE L2 3363 3424 -2 9 1306 451 87 36 38 chr15 94569510 94569612 -8925362 - L1_Mur2 LINE L1 -2571 3306 3206 9 1306 4762 129 48 103 chr15 94569612 94570286 -8924688 - RMER12 LTR ERVK 0 1404 376 9 1306 1291 77 21 32 chr15 94570286 94570475 -8924499 - B2_Mm2 SINE B2 -7 188 2 9 1306 4762 109 17 55 chr15 94570475 94570852 -8924122 - RMER12 LTR ERVK -947 375 1 9 1306 7620 157 36 20 chr15 94570852 94571435 -8923539 - L1_Mur2 LINE L1 -2670 3207 2604 9 1306 450 65 0 0 chr15 94571435 94571497 -8923477 + (TG)n Simple_repeat Simple_repeat 1 62 0 9 1306 7620 157 36 20 chr15 94571497 94572047 -8922927 - L1_Mur2 LINE L1 -3274 2603 2051 9 1306 249 33 0 0 chr15 94572047 94572077 -8922897 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1306 7620 157 36 20 chr15 94572077 94572420 -8922554 - L1_Mur2 LINE L1 -3827 2050 1706 9 1306 21 36 0 0 chr15 94572841 94572869 -8922105 + AT_rich Low_complexity Low_complexity 1 28 0 1 1306 4750 106 20 0 chr15 94573550 94574209 -8920765 - Lx4A LINE L1 -2 7056 6385 1 1306 2811 172 22 104 chr15 94575173 94575796 -8919178 - RMER15 LTR ERVL 0 575 4 1 1306 607 324 47 0 chr15 94576477 94576690 -8918284 + ID_B1 SINE B4 2 224 0 1 1306 201 161 0 0 chr15 94576690 94576721 -8918253 + (CTAA)n Simple_repeat Simple_repeat 3 33 0 1 1306 1087 63 50 0 chr15 94576913 94577232 -8917742 + (TCTA)n Simple_repeat Simple_repeat 1 335 0 1 1306 285 220 0 0 chr15 94577446 94577505 -8917469 - MER46C DNA MER2_type -12 326 268 1 1306 1295 107 24 10 chr15 94577621 94577829 -8917145 + URR1B DNA MER1_type 15 225 0 1 1306 489 168 78 99 chr15 94577659 94577851 -8917123 - CYRA11_Mm Unknown Y-chromosome -272 345 158 1 1306 22 0 0 0 chr15 94577911 94577933 -8917041 + AT_rich Low_complexity Low_complexity 1 22 0 1 1306 292 289 86 37 chr15 94578102 94578264 -8916710 - B4A SINE B4 -120 172 3 1 1306 340 360 19 42 chr15 94578402 94578663 -8916311 + L3 LINE CR1 4146 4400 -89 1 1306 314 353 17 0 chr15 94579143 94579262 -8915712 + ORR1E LTR MaLR 9 129 -230 1 1306 268 298 37 82 chr15 94579388 94579523 -8915451 + ORR1E LTR MaLR 251 379 0 1 1306 188 191 48 0 chr15 94580473 94580515 -8914459 - MIR SINE MIR -135 127 84 1 1306 234 0 0 0 chr15 94581584 94581610 -8913364 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1306 349 320 91 25 chr15 94581714 94581913 -8913061 - Lx9 LINE L1 -311 7333 7122 1 1306 918 84 19 0 chr15 94581950 94582105 -8912869 + (TCTA)n Simple_repeat Simple_repeat 4 161 0 1 1306 2640 247 40 16 chr15 94582120 94582745 -8912229 - Lx9 LINE L1 -663 6981 6342 1 1306 189 107 0 0 chr15 94582746 94582774 -8912200 + (CATA)n Simple_repeat Simple_repeat 2 29 0 1 1306 280 219 0 15 chr15 94582979 94583044 -8911930 - Lx9 LINE L1 -1679 5965 5902 1 1306 21 57 0 0 chr15 94583384 94583419 -8911555 + AT_rich Low_complexity Low_complexity 1 35 0 1 1306 226 361 0 10 chr15 94583712 94583810 -8911164 + PB1D7 SINE Alu 23 119 -1 1 1306 563 224 152 13 chr15 94583845 94584003 -8910971 + B3A SINE B2 1 180 -18 1 1306 618 286 103 21 chr15 94584742 94585071 -8909903 + MLT1B LTR MaLR 25 380 -10 1 1306 300 300 0 0 chr15 94585829 94585909 -8909065 + ID4_ SINE ID 4 83 0 1 1306 6237 92 21 1 chr15 94586388 94587240 -8907734 - Lx LINE L1 -3 6651 5783 1 1306 8716 93 22 20 chr15 94587240 94588897 -8906077 - L1Md_F2 LINE L1 0 6997 5339 1 1306 426 16 31 16 chr15 94589567 94589631 -8905343 + (TTA)n Simple_repeat Simple_repeat 2 66 0 1 1306 1195 56 0 0 chr15 94589632 94589774 -8905200 - B1_Mus2 SINE Alu -4 143 2 1 1306 638 75 11 0 chr15 94591525 94591618 -8903356 + (TCTA)n Simple_repeat Simple_repeat 3 96 0 1 1306 2287 185 252 5 chr15 94592977 94593568 -8901406 + RMER19A LTR ERVK 1 737 0 1 1306 2063 78 18 61 chr15 94594405 94594472 -8900502 - ORR1A2 LTR MaLR 0 327 258 1 1306 6283 27 0 0 chr15 94594472 94595186 -8899788 - L1Md_T LINE L1 0 6582 5869 1 1306 2063 78 18 61 chr15 94595186 94595460 -8899514 - ORR1A2 LTR MaLR -70 257 2 1 1306 1102 88 0 0 chr15 94596815 94596974 -8898000 - B2_Mm2 SINE B2 -35 160 2 1 1306 314 228 8 0 chr15 94597677 94597804 -8897170 + (TG)n Simple_repeat Simple_repeat 1 128 0 1 1306 806 290 16 62 chr15 94597861 94598166 -8896808 - B4 SINE B4 0 292 2 1 1306 348 152 0 0 chr15 94598233 94598299 -8896675 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 1306 309 260 0 0 chr15 94598386 94598490 -8896484 + (TG)n Simple_repeat Simple_repeat 2 105 0 1 1306 307 301 97 11 chr15 94598603 94598778 -8896196 - L1M1 LINE L1 -523 5777 5588 1 1306 180 0 0 0 chr15 94599371 94599391 -8895583 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 1306 1726 129 76 84 chr15 94599826 94600206 -8894768 + ORR1B1 LTR MaLR 18 394 0 1 1306 254 38 0 71 chr15 94600286 94600342 -8894632 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1306 631 289 0 0 chr15 94601070 94601219 -8893755 + RSINE1 SINE B4 9 157 -8 1 1306 270 0 0 0 chr15 94601556 94601586 -8893388 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1306 291 146 0 0 chr15 94601691 94601746 -8893228 + (A)n Simple_repeat Simple_repeat 1 55 0 1 1306 2655 207 13 19 chr15 94603488 94604011 -8890963 + Lx6 LINE L1 6935 7454 -6 1 1306 28 0 0 0 chr15 94604475 94604503 -8890471 + AT_rich Low_complexity Low_complexity 1 28 0 1 1306 21 0 0 0 chr15 94605407 94605428 -8889546 + AT_rich Low_complexity Low_complexity 1 21 0 1 1306 741 260 48 24 chr15 94605460 94605669 -8889305 - B3 SINE B2 0 216 3 1 1306 260 96 0 19 chr15 94605685 94605738 -8889236 - RMER1B Other Other 0 1066 1015 1 1306 1325 176 151 0 chr15 94605776 94606067 -8888907 - RMER1B Other Other -135 931 597 1 1306 251 332 60 81 chr15 94606156 94606490 -8888484 + LTR55 LTR ERV 96 422 -126 1 1306 253 127 37 25 chr15 94606824 94606905 -8888069 + CT-rich Low_complexity Low_complexity 1 82 0 1 1306 195 69 0 0 chr15 94607736 94607765 -8887209 + (TTAA)n Simple_repeat Simple_repeat 4 32 0 1 1306 1227 37 6 0 chr15 94607766 94607927 -8887047 - B2_Mm2 SINE B2 -32 163 2 1 1306 229 290 107 45 chr15 94608151 94608328 -8886646 - L1MD3 LINE L1 -252 7743 7453 1 1306 192 111 0 0 chr15 94608622 94608658 -8886316 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1306 1301 20 0 0 chr15 94608660 94608807 -8886167 - B1_Mm SINE Alu 0 147 1 1 1306 180 0 0 0 chr15 94608817 94608837 -8886137 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1 1306 226 281 0 89 chr15 94609175 94609265 -8885709 + ID4 SINE ID 1 82 -1 1 1306 395 330 74 19 chr15 94611229 94611460 -8883514 + MLT2B1 LTR ERVL 311 548 -19 1 1306 289 330 0 11 chr15 94611608 94611703 -8883271 - L2c LINE L2 -21 3366 3273 1 1306 340 318 79 0 chr15 94612372 94612498 -8882476 + B4A SINE B4 139 274 -18 1 1306 543 43 0 0 chr15 94612514 94612584 -8882390 + (CA)n Simple_repeat Simple_repeat 1 70 0 1 1306 606 99 0 0 chr15 94612725 94612816 -8882158 + (TCCC)n Simple_repeat Simple_repeat 4 94 0 1 1306 503 294 70 75 chr15 94614461 94614660 -8880314 - MER63B DNA AcHobo -3 433 236 1 1306 450 0 0 0 chr15 94614695 94614745 -8880229 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1306 6627 70 42 6 chr15 94614933 94615795 -8879179 - RLTR13B1 LTR ERVK 0 893 1 1 1306 2557 83 0 0 chr15 94616928 94617255 -8877719 - ORR1A2 LTR MaLR 0 327 1 1 1306 206 118 0 0 chr15 94617340 94617374 -8877600 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 1 1306 1219 41 7 0 chr15 94617375 94617521 -8877453 - B1_Mus2 SINE Alu 0 147 1 1 1306 251 224 13 0 chr15 94617538 94617614 -8877360 + CT-rich Low_complexity Low_complexity 3 79 0 1 1306 639 88 0 0 chr15 94618246 94618337 -8876637 + (CA)n Simple_repeat Simple_repeat 1 91 0 1 1306 1290 243 85 46 chr15 94618505 94619109 -8875865 - RLTR40 LTR ERVK -47 770 59 1 1306 395 289 9 9 chr15 94619213 94619328 -8875646 + CT-rich Low_complexity Low_complexity 6 120 0 1 1306 392 231 53 33 chr15 94619528 94619680 -8875294 - L1_Rod LINE L1 -34 5813 5659 1 1306 373 319 118 34 chr15 94619949 94620093 -8874881 - L1M5 LINE L1 -2432 3714 3577 1 1306 216 0 0 0 chr15 94620093 94620117 -8874857 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 1306 373 319 118 34 chr15 94620117 94620329 -8874645 - L1M5 LINE L1 -2570 3576 3328 1 1306 7726 61 0 1 chr15 94620515 94621465 -8873509 - L1_Mus1 LINE L1 0 6567 5619 1 1306 257 242 90 15 chr15 94621530 94621597 -8873377 - ORR1E LTR MaLR -5 354 283 1 1306 2533 156 47 25 chr15 94622288 94622735 -8872239 + RMER6B LTR ERVK 1 457 -4 1 1306 26 0 0 0 chr15 94623320 94623346 -8871628 + AT_rich Low_complexity Low_complexity 1 26 0 1 1306 2095 147 49 10 chr15 94623383 94623774 -8871200 - MTC LTR MaLR -8 413 8 1 1306 796 302 23 36 chr15 94624057 94624359 -8870615 - ORR1E LTR MaLR -5 354 57 1 1306 1550 55 10 0 chr15 94624388 94624587 -8870387 - L1_Mus1 LINE L1 0 6567 6367 1 1306 989 153 196 0 chr15 94624608 94624797 -8870177 - URR1A DNA MER1_type 0 226 1 1 1306 537 276 38 38 chr15 94624826 94625063 -8869911 - RMER15 LTR ERVL -14 561 325 1 1306 324 0 0 0 chr15 94627531 94627567 -8867407 + (TC)n Simple_repeat Simple_repeat 1 36 0 1 1306 408 88 0 0 chr15 94627567 94627623 -8867351 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 1306 270 0 0 0 chr15 94627843 94627873 -8867101 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 1306 378 306 96 10 chr15 94627882 94627953 -8867021 + MER2 DNA MER2_type 123 200 -145 1 1306 534 286 169 4 chr15 94627953 94628202 -8866772 + B4A SINE B4 2 291 -1 1 1306 378 306 96 10 chr15 94628202 94628328 -8866646 + MER2 DNA MER2_type 201 337 -8 1 1306 397 233 320 0 chr15 94628636 94628786 -8866188 - B3A SINE B2 0 198 1 1 1306 889 318 84 8 chr15 94629424 94629779 -8865195 - Lx8 LINE L1 -270 7203 6822 1 1306 300 91 0 0 chr15 94631449 94631493 -8863481 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1306 29 0 0 0 chr15 94632642 94632671 -8862303 + AT_rich Low_complexity Low_complexity 1 29 0 1 1306 198 0 0 0 chr15 94633003 94633025 -8861949 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1 1306 529 285 11 16 chr15 94633452 94633634 -8861340 - B3A SINE B2 -16 182 2 1 1307 506 173 0 8 chr15 94634914 94635048 -8859926 + GA-rich Low_complexity Low_complexity 2 134 0 1 1307 270 136 0 0 chr15 94635245 94635289 -8859685 + (ATG)n Simple_repeat Simple_repeat 2 45 0 1 1307 4089 28 11 4 chr15 94635957 94636432 -8858542 - L1Md_F2 LINE L1 0 6582 6105 1 1307 379 205 13 0 chr15 94637112 94637190 -8857784 - PB1D10 SINE Alu -1 116 38 1 1307 211 135 0 0 chr15 94638386 94638423 -8856551 + BC1_Mm scRNA scRNA 6 42 -110 2 1307 459 222 211 50 chr15 94638469 94638616 -8856358 - MTEa LTR MaLR -156 223 47 2 1307 1433 74 21 0 chr15 94638616 94638805 -8856169 - B2_Mm1a SINE B2 0 193 1 2 1307 459 222 211 50 chr15 94638805 94638818 -8856156 - MTEa LTR MaLR -333 46 37 2 1307 343 247 31 31 chr15 94638838 94638934 -8856040 + MTEa LTR MaLR 283 378 -1 2 1307 216 129 30 61 chr15 94639009 94639075 -8855899 + (TTTA)n Simple_repeat Simple_repeat 3 66 0 2 1307 231 61 0 0 chr15 94639189 94639222 -8855752 + (CAA)n Simple_repeat Simple_repeat 2 34 0 2 1307 1892 153 56 51 chr15 94639256 94639590 -8855384 + ORR1B1 LTR MaLR 1 339 -55 2 1307 4928 49 2 0 chr15 94639590 94640180 -8854794 + L1_Mus1 LINE L1 5977 6567 0 2 1307 1892 153 56 51 chr15 94640180 94640237 -8854737 + ORR1B1 LTR MaLR 340 394 0 2 1307 1468 246 35 30 chr15 94640277 94640680 -8854294 - MTD LTR MaLR -14 405 1 2 1307 226 208 133 40 chr15 94640950 94641025 -8853949 - L2 LINE L2 -544 2875 2794 2 1307 340 253 17 22 chr15 94641561 94641739 -8853235 + (CATA)n Simple_repeat Simple_repeat 4 180 0 2 1307 213 236 36 0 chr15 94641758 94641868 -8853106 + (CATA)n Simple_repeat Simple_repeat 4 117 0 2 1307 453 36 0 0 chr15 94641876 94641931 -8853043 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 1307 402 358 145 4 chr15 94643227 94643482 -8851492 + B4A SINE B4 2 292 0 2 1307 647 226 4 0 chr15 94643487 94643751 -8851223 + (CA)n Simple_repeat Simple_repeat 1 265 0 2 1307 4354 144 55 68 chr15 94644555 94645464 -8849510 + RMER19B LTR ERVK 1 897 -5 2 1307 495 301 133 15 chr15 94645502 94645840 -8849134 - MTEb LTR MaLR -1 378 1 2 1307 5680 16 0 0 chr15 94645876 94646556 -8848418 - L1_Mm LINE L1 -3793 2090 1411 2 1307 5373 15 13 0 chr15 94646556 94647169 -8847805 + L1Md_T LINE L1 4965 5585 -298 2 1307 8659 31 0 0 chr15 94647170 94648166 -8846808 + L1Md_T LINE L1 5587 6582 0 2 1307 666 281 65 5 chr15 94648343 94648529 -8846445 - B3A SINE B2 -1 197 1 2 1307 713 259 207 3 chr15 94649499 94649794 -8845180 - MTD LTR MaLR -12 407 53 2 1307 1469 149 44 138 chr15 94649885 94650336 -8844638 - RMER17C LTR ERVK -1 409 1 2 1307 1305 95 0 0 chr15 94653090 94653587 -8841387 + (TG)n Simple_repeat Simple_repeat 1 497 0 2 1307 529 356 50 38 chr15 94653699 94654041 -8840933 + Tigger7 DNA MER2_type 1 346 -2145 2 1307 718 300 10 0 chr15 94654174 94654374 -8840600 + ID_B1 SINE B4 2 203 -21 2 1307 27 29 0 0 chr15 94654462 94654496 -8840478 + AT_rich Low_complexity Low_complexity 1 34 0 2 1307 441 0 0 0 chr15 94655149 94655198 -8839776 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 2 1307 444 93 0 0 chr15 94655405 94655480 -8839494 + (TATG)n Simple_repeat Simple_repeat 2 76 0 2 1307 2657 226 83 31 chr15 94655572 94656356 -8838618 - Lx7 LINE L1 -174 7522 6819 2 1307 737 225 48 54 chr15 94656393 94656602 -8838372 - B3 SINE B2 -8 208 2 2 1307 8150 45 6 2 chr15 94656919 94658005 -8836969 - L1Md_F2 LINE L1 -2 6580 5490 2 1307 22 35 0 0 chr15 94658322 94658351 -8836623 + AT_rich Low_complexity Low_complexity 1 29 0 2 1307 311 284 102 39 chr15 94658892 94659097 -8835877 - L1M5 LINE L1 -407 5833 5616 2 1307 591 112 0 0 chr15 94661269 94661358 -8833616 + (TTCC)n Simple_repeat Simple_repeat 1 89 0 2 1307 980 140 0 20 chr15 94661390 94661543 -8833431 - B1_Mur4 SINE Alu 0 150 1 2 1307 825 11 0 0 chr15 94661934 94662028 -8832946 + (TC)n Simple_repeat Simple_repeat 1 94 0 2 1307 382 277 8 32 chr15 94662794 94662917 -8832057 - PB1D9 SINE Alu 0 120 1 2 1307 360 167 174 20 chr15 94663144 94663242 -8831732 - Lx9 LINE L1 -1 7643 7531 2 1307 432 261 0 0 chr15 94663550 94663642 -8831332 - B3A SINE B2 -105 93 2 2 1307 191 61 30 0 chr15 94666161 94666194 -8828780 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1307 342 295 23 26 chr15 94667501 94667670 -8827304 + L1MA5 LINE L1 6118 6293 -10 2 1307 461 365 87 35 chr15 94668641 94669010 -8825964 + MamRep605 Unknown Unknown 355 742 -134 2 1307 504 0 0 0 chr15 94669440 94669496 -8825478 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 2 1307 339 274 69 26 chr15 94671612 94671728 -8823246 - MLT1A0 LTR MaLR -89 276 156 2 1307 1159 132 122 0 chr15 94671732 94671929 -8823045 + URR1A DNA MER1_type 1 221 -5 2 1307 354 297 52 41 chr15 94671914 94672086 -8822888 - MLT1A0 LTR MaLR -191 174 1 2 1307 312 309 103 20 chr15 94672705 94672900 -8822074 + L3b LINE CR1 11 221 -261 2 1307 429 20 0 0 chr15 94672989 94673039 -8821935 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1307 29 0 0 0 chr15 94673182 94673211 -8821763 + AT_rich Low_complexity Low_complexity 1 29 0 2 1307 225 163 0 0 chr15 94673284 94673333 -8821641 + CT-rich Low_complexity Low_complexity 1 49 0 2 1307 3194 154 93 22 chr15 94673778 94674040 -8820934 - RMER6C LTR ERVK 0 690 405 2 1307 1411 6 6 6 chr15 94674040 94674209 -8820765 + (TTCTC)n Simple_repeat Simple_repeat 4 172 0 2 1307 819 0 0 0 chr15 94674209 94674299 -8820675 + (TTCCC)n Simple_repeat Simple_repeat 5 95 0 2 1307 3194 154 93 22 chr15 94674299 94674679 -8820295 - RMER6C LTR ERVK -286 404 2 2 1307 1894 183 212 30 chr15 94675658 94676153 -8818821 - RMER19B LTR ERVK 0 902 318 2 1307 3235 38 0 11 chr15 94676310 94676679 -8818295 - RLTR10B2 LTR ERVK 0 365 1 2 1307 893 232 94 117 chr15 94676759 94677057 -8817917 - B4 SINE B4 0 292 2 2 1307 349 235 335 7 chr15 94677081 94677377 -8817597 - L1MCa LINE L1 -4998 1753 1361 2 1307 1238 82 0 0 chr15 94677388 94677535 -8817439 - B1_Mus1 SINE Alu -1 147 1 2 1307 285 153 14 27 chr15 94677621 94677695 -8817279 + CT-rich Low_complexity Low_complexity 2 74 0 2 1307 317 244 78 62 chr15 94677712 94677891 -8817083 - L1MCa LINE L1 -4887 1158 977 2 1307 510 329 98 44 chr15 94678286 94678807 -8816167 - L1MCa LINE L1 -5735 1016 468 2 1307 1056 234 154 6 chr15 94678831 94679150 -8815824 - ORR1D1 LTR MaLR -1 373 8 2 1307 343 207 126 0 chr15 94679432 94679519 -8815455 + L1MA7 LINE L1 6013 6110 -181 2 1307 189 0 0 0 chr15 94679925 94679946 -8815028 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2 1307 412 295 0 0 chr15 94680634 94680739 -8814235 + MTD LTR MaLR 4 108 -311 2 1307 1124 225 58 37 chr15 94680770 94681065 -8813909 + MTD LTR MaLR 74 374 -45 2 1307 666 207 21 21 chr15 94681641 94681784 -8813190 + B1_Mur1 SINE Alu 2 144 -5 2 1307 2226 128 0 0 chr15 94683322 94683641 -8811333 - ORR1A2 LTR MaLR -8 319 1 2 1307 2400 144 70 41 chr15 94683927 94684413 -8810561 - RLTR28 LTR ERVL -14 510 11 2 1307 1315 61 33 6 chr15 94685517 94685699 -8809275 - B2_Mm1a SINE B2 0 193 7 2 1307 578 300 84 5 chr15 94685715 94685906 -8809068 + Tigger5 DNA MER2_type 39 244 -2162 2 1307 231 118 0 0 chr15 94686024 94686058 -8808916 - RMER15 LTR ERVL 0 575 542 2 1307 284 330 49 33 chr15 94686335 94686457 -8808517 + RMER10B LTR ERVL 244 367 -31 2 1307 1842 173 50 123 chr15 94686499 94686961 -8808013 - RLTR23 LTR ERV1 0 430 3 2 1307 1572 161 179 120 chr15 94686969 94687427 -8807547 - RMER15 LTR ERVL -90 485 1 2 1307 435 237 26 26 chr15 94688318 94688435 -8806539 - RLTR23 LTR ERV1 0 430 314 2 1307 3467 50 2 2 chr15 94689628 94690028 -8804946 + MTB LTR MaLR 1 400 0 2 1307 420 20 0 0 chr15 94690530 94690579 -8804395 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1307 351 216 22 96 chr15 94690579 94690676 -8804298 - B1F2 SINE Alu -13 136 2 2 1307 1197 258 21 21 chr15 94691153 94691482 -8803492 + Lx6 LINE L1 7105 7433 -27 2 1307 360 0 0 0 chr15 94692826 94692866 -8802108 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 2 1307 416 246 7 0 chr15 94692969 94693107 -8801867 + (TG)n Simple_repeat Simple_repeat 1 139 0 2 1307 186 43 0 0 chr15 94693200 94693223 -8801751 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 1307 483 319 125 0 chr15 94693275 94693419 -8801555 + RSINE1 SINE B4 2 163 -2 2 1307 777 316 36 77 chr15 94693574 94693965 -8801009 + MLT2C1 LTR ERVL 13 541 -15 2 1307 565 175 15 0 chr15 94693965 94694102 -8800872 + (TCTA)n Simple_repeat Simple_repeat 2 140 0 2 1307 639 150 0 0 chr15 94694104 94694244 -8800730 + (TATG)n Simple_repeat Simple_repeat 2 141 0 2 1307 286 275 26 0 chr15 94694682 94694779 -8800195 + L2c LINE L2 3274 3375 0 2 1307 250 362 8 49 chr15 94695034 94695156 -8799818 - MamGypLTR3 LTR Gypsy -7 832 716 2 1307 558 67 0 0 chr15 94695782 94695857 -8799117 + (TA)n Simple_repeat Simple_repeat 2 76 0 2 1307 265 316 81 36 chr15 94696532 94696755 -8798219 - L1M5 LINE L1 -346 5894 5662 2 1307 317 299 36 76 chr15 94696753 94697028 -8797946 - L1M5 LINE L1 -2614 3532 3269 2 1307 261 289 72 102 chr15 94697104 94697270 -8797704 - MTEb LTR MaLR -18 361 201 2 1307 566 325 60 10 chr15 94697400 94697599 -8797375 - MTE-int LTR MaLR -45 1535 1327 2 1307 303 49 0 0 chr15 94699160 94699201 -8795773 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 2 1307 713 285 43 14 chr15 94699430 94699640 -8795334 + B3 SINE B2 1 216 0 2 1307 216 0 0 0 chr15 94699732 94699756 -8795218 + (TTTTTA)n Simple_repeat Simple_repeat 1 24 0 2 1307 204 40 0 0 chr15 94700651 94700676 -8794298 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 1307 200 86 29 0 chr15 94700771 94700806 -8794168 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1307 1926 289 54 29 chr15 94700867 94701555 -8793419 - Lx9 LINE L1 -171 7473 6769 2 1307 306 183 0 0 chr15 94701876 94701947 -8793027 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 1307 4236 193 143 24 chr15 94703254 94704319 -8790655 + RMER12 LTR ERVK 1 1191 -131 2 1307 192 396 10 29 chr15 94705761 94705865 -8789109 - L2a LINE L2 -12 3414 3313 2 1307 1023 224 9 18 chr15 94706136 94706359 -8788615 - URR1B DNA MER1_type 0 225 5 2 1307 281 308 149 45 chr15 94706623 94706844 -8788130 - L1MEg1 LINE L1 -5961 274 31 2 1307 267 31 0 0 chr15 94706883 94706915 -8788059 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1307 1327 137 108 0 chr15 94707614 94707818 -8787156 + URR1A DNA MER1_type 1 226 0 3 1307 213 36 0 0 chr15 94707888 94707901 -8787073 + (A)n Simple_repeat Simple_repeat 1 13 0 3 1307 864 110 165 0 chr15 94707901 94708028 -8786946 + B1_Mus1 SINE Alu 1 148 0 3 1307 213 36 0 0 chr15 94708028 94708042 -8786932 + (A)n Simple_repeat Simple_repeat 1 14 0 3 1307 3245 176 32 33 chr15 94708609 94709208 -8785766 + Lx5 LINE L1 6453 7050 0 3 1307 24 0 0 0 chr15 94709208 94709232 -8785742 + AT_rich Low_complexity Low_complexity 1 24 0 3 1307 180 0 0 0 chr15 94711589 94711609 -8783365 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 3 1307 1435 202 16 42 chr15 94713248 94713558 -8781416 - ORR1B2 LTR MaLR -65 302 1 3 1307 491 304 38 47 chr15 94713704 94713939 -8781035 - Lx8 LINE L1 -484 6989 6757 3 1307 21 0 0 0 chr15 94714264 94714285 -8780689 + AT_rich Low_complexity Low_complexity 1 21 0 3 1307 821 306 95 36 chr15 94714471 94714799 -8780175 + Lx8 LINE L1 6967 7325 -148 3 1307 225 0 0 0 chr15 94714799 94714824 -8780150 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 1307 821 306 95 36 chr15 94714824 94714939 -8780035 + Lx8 LINE L1 7326 7436 -37 3 1307 424 303 97 75 chr15 94714930 94715251 -8779723 + Lx8 LINE L1 7144 7471 -2 3 1307 237 374 96 30 chr15 94715343 94715478 -8779496 + ID_B1 SINE B4 81 224 0 3 1307 234 91 0 0 chr15 94715502 94715535 -8779439 + (T)n Simple_repeat Simple_repeat 1 33 0 3 1307 1179 224 9 0 chr15 94716270 94716484 -8778490 + B3 SINE B2 1 216 0 3 1307 24 32 0 0 chr15 94716684 94716715 -8778259 + AT_rich Low_complexity Low_complexity 1 31 0 3 1307 209 108 27 0 chr15 94717485 94717522 -8777452 + (GGAA)n Simple_repeat Simple_repeat 4 41 0 3 1307 327 257 9 37 chr15 94718958 94719067 -8775907 + CT-rich Low_complexity Low_complexity 4 109 0 3 1307 32 43 0 0 chr15 94720765 94720811 -8774163 + AT_rich Low_complexity Low_complexity 1 46 0 3 1307 883 224 69 10 chr15 94721729 94721932 -8773042 - B3 SINE B2 -1 215 1 3 1307 1107 251 60 12 chr15 94722311 94722620 -8772354 - ORR1D2 LTR MaLR 0 370 39 3 1307 380 319 7 0 chr15 94722948 94723086 -8771888 - Lx9 LINE L1 -266 7378 7240 3 1307 381 16 32 32 chr15 94723971 94724034 -8770940 + (CAAAA)n Simple_repeat Simple_repeat 2 64 0 3 1307 431 336 90 83 chr15 94727676 94727965 -8767009 + B4A SINE B4 2 292 0 3 1307 259 326 203 37 chr15 94729145 94729416 -8765558 - Tigger10 DNA Tigger -96 1747 1432 3 1307 256 240 154 0 chr15 94729503 94729607 -8765367 + Lx8 LINE L1 7231 7350 -123 3 1307 2135 161 31 10 chr15 94730102 94730485 -8764489 + Lx2B LINE L1 6610 7000 0 3 1307 743 50 0 10 chr15 94731003 94731104 -8763870 + (TTC)n Simple_repeat Simple_repeat 3 102 0 3 1307 1141 96 0 11 chr15 94731104 94731284 -8763690 + (TCC)n Simple_repeat Simple_repeat 3 180 0 3 1307 241 204 20 0 chr15 94732436 94732485 -8762489 - ID4 SINE ID -2 81 32 3 1307 4417 171 58 36 chr15 94732549 94733166 -8761808 - RMER19B LTR ERVK 0 902 248 3 1307 306 0 0 0 chr15 94733166 94733200 -8761774 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1307 4417 171 58 36 chr15 94733200 94733465 -8761509 - RMER19B LTR ERVK -655 247 2 3 1307 850 294 134 22 chr15 94733723 94734193 -8760781 - L1MB3 LINE L1 -162 6021 5499 3 1307 301 167 0 0 chr15 94735664 94735712 -8759262 - URR1B DNA MER1_type -1 224 177 3 1307 1072 260 0 11 chr15 94735712 94735988 -8758986 + Lx6 LINE L1 7159 7431 -29 3 1307 581 270 8 0 chr15 94735988 94736114 -8758860 - URR1B DNA MER1_type -98 127 1 3 1307 1283 54 6 0 chr15 94736225 94736393 -8758581 + (TTCC)n Simple_repeat Simple_repeat 4 172 0 3 1307 21 71 0 0 chr15 94736802 94736844 -8758130 + AT_rich Low_complexity Low_complexity 1 42 0 3 1307 25 0 0 0 chr15 94737135 94737160 -8757814 + AT_rich Low_complexity Low_complexity 1 25 0 3 1307 21 0 0 0 chr15 94737619 94737640 -8757334 + AT_rich Low_complexity Low_complexity 1 21 0 3 1307 603 331 118 99 chr15 94738118 94738695 -8756279 + MLT1E2 LTR MaLR 6 595 -32 3 1307 489 110 0 0 chr15 94738769 94738842 -8756132 + (TCCC)n Simple_repeat Simple_repeat 4 76 0 3 1307 1254 219 104 72 chr15 94739228 94739455 -8755519 - RMER13A LTR ERVK -400 460 220 3 1307 3468 168 232 51 chr15 94739455 94740219 -8754755 + RMER19B LTR ERVK 1 902 0 3 1307 1254 219 104 72 chr15 94740219 94740424 -8754550 - RMER13A LTR ERVK -641 219 14 3 1307 495 308 129 21 chr15 94740684 94741056 -8753918 + Charlie22a DNA MER1_type 18 429 -62 3 1307 244 245 202 10 chr15 94741144 94741243 -8753731 + B1_Mus2 SINE Alu 22 139 -9 3 1307 288 77 0 0 chr15 94741243 94741282 -8753692 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 3 1307 252 0 0 0 chr15 94741395 94741423 -8753551 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 3 1307 895 80 14 0 chr15 94741507 94741645 -8753329 + (CA)n Simple_repeat Simple_repeat 2 141 0 3 1307 417 39 0 0 chr15 94742836 94742887 -8752087 + (TCCC)n Simple_repeat Simple_repeat 3 53 0 3 1307 233 119 24 0 chr15 94743019 94743061 -8751913 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 3 1307 1292 55 0 0 chr15 94743062 94743208 -8751766 - B1_Mus1 SINE Alu -1 147 2 3 1307 22 35 0 0 chr15 94743214 94743243 -8751731 + AT_rich Low_complexity Low_complexity 1 29 0 3 1307 212 0 36 0 chr15 94744214 94744242 -8750732 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1307 1157 71 0 7 chr15 94744248 94744389 -8750585 - B1_Mus2 SINE Alu -5 142 3 3 1307 196 53 53 0 chr15 94744392 94744430 -8750544 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 3 1307 189 121 0 0 chr15 94745780 94745813 -8749161 + (ATTG)n Simple_repeat Simple_repeat 1 33 0 3 1307 3215 226 24 62 chr15 94746992 94747594 -8747380 - Lx6 LINE L1 -4 7456 6879 3 1307 468 0 0 0 chr15 94747594 94747646 -8747328 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1307 3215 205 23 155 chr15 94747646 94747943 -8747031 - Lx6 LINE L1 -810 6886 6637 3 1307 762 303 83 64 chr15 94747949 94748002 -8746972 - L1_Mur3 LINE L1 -121 5759 5696 3 1307 3105 55 47 13 chr15 94748002 94748387 -8746587 + MTB LTR MaLR 3 400 0 3 1307 949 298 25 9 chr15 94748387 94748725 -8746249 - L1_Mur3 LINE L1 -579 5712 5348 3 1307 4192 92 34 11 chr15 94748725 94749277 -8745697 + L1_Mus4 LINE L1 6065 6629 -7 3 1307 762 303 83 64 chr15 94749277 94749402 -8745572 - L1_Mur3 LINE L1 -533 5347 5233 3 1307 903 287 52 96 chr15 94749465 94749479 -8745495 - L1M2 LINE L1 -873 5270 5257 3 1307 597 120 0 0 chr15 94749479 94749571 -8745403 + (TA)n Simple_repeat Simple_repeat 2 93 0 3 1307 333 0 0 0 chr15 94749571 94749607 -8745367 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1307 903 287 52 96 chr15 94749607 94750230 -8744744 - L1M2 LINE L1 -887 5256 4661 3 1307 576 267 0 64 chr15 94750264 94750436 -8744538 - ID_B1 SINE B4 0 224 64 3 1307 346 246 14 0 chr15 94750528 94750597 -8744377 - ID4_ SINE ID -11 72 3 3 1307 935 292 93 4 chr15 94750597 94751047 -8743927 - L1_Mur3 LINE L1 -1737 4143 3654 3 1307 298 218 45 11 chr15 94751067 94751155 -8743819 + L1_Mur3 LINE L1 3280 3370 -2510 3 1307 219 231 215 0 chr15 94751193 94751258 -8743716 + B3 SINE B2 1 79 -137 3 1307 1353 314 30 32 chr15 94751796 94752323 -8742651 - Lx8 LINE L1 -453 7020 6495 3 1307 282 362 33 9 chr15 94752330 94752446 -8742528 - PB1D9 SINE Alu -26 123 1 3 1307 302 315 119 56 chr15 94752694 94752997 -8741977 + L1M5 LINE L1 2943 3264 -2882 3 1307 21 0 0 0 chr15 94753398 94753419 -8741555 + AT_rich Low_complexity Low_complexity 1 21 0 3 1307 243 61 0 0 chr15 94753525 94753558 -8741416 + (TTG)n Simple_repeat Simple_repeat 2 34 0 3 1307 267 162 51 10 chr15 94755837 94755896 -8739078 - MTC LTR MaLR -301 78 21 3 1307 1128 198 36 27 chr15 94755942 94755991 -8738983 + URR1B DNA MER1_type 1 49 -176 3 1307 2112 151 101 0 chr15 94755991 94756349 -8738625 - ORR1B1 LTR MaLR 0 394 1 3 1307 1128 198 36 27 chr15 94756349 94756522 -8738452 + URR1B DNA MER1_type 50 225 0 3 1307 350 312 31 39 chr15 94756648 94756778 -8738196 + RSINE1 SINE B4 13 141 -24 3 1307 446 254 75 17 chr15 94757380 94757500 -8737474 + B1F SINE Alu 16 142 -7 3 1307 430 323 79 57 chr15 94759539 94759684 -8735290 + B3A SINE B2 2 153 -45 3 1307 459 52 0 0 chr15 94759684 94759742 -8735232 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 1307 430 323 79 57 chr15 94759742 94759773 -8735201 + B3A SINE B2 154 182 -16 3 1307 273 253 67 0 chr15 94759948 94760023 -8734951 - RMER15-int LTR ERVL -33 4966 4887 3 1307 1418 71 15 89 chr15 94760117 94760319 -8734655 - B2_Mm2 SINE B2 -8 187 1 3 1307 2386 183 9 9 chr15 94760413 94760833 -8734141 + MTC LTR MaLR 1 420 -1 3 1307 654 13 0 0 chr15 94761607 94761682 -8733292 + (GA)n Simple_repeat Simple_repeat 1 75 0 3 1307 223 93 23 23 chr15 94763938 94763982 -8730992 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 1307 491 312 42 101 chr15 94763982 94764289 -8730685 - B4A SINE B4 -3 289 1 3 1307 29 0 0 0 chr15 94764671 94764700 -8730274 + AT_rich Low_complexity Low_complexity 1 29 0 3 1308 204 40 0 0 chr15 94765627 94765652 -8729322 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1308 270 81 0 0 chr15 94766652 94766689 -8728285 + (CAT)n Simple_repeat Simple_repeat 2 38 0 3 1308 3384 215 68 156 chr15 94766915 94768023 -8726951 + RMER1B Other Other 44 1053 -13 3 1308 564 15 0 0 chr15 94768024 94768089 -8726885 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 1308 398 272 17 9 chr15 94768091 94768206 -8726768 + ID_B1 SINE B4 109 224 0 3 1308 799 291 67 56 chr15 94769238 94769522 -8725452 + B4 SINE B4 2 288 -4 3 1308 399 320 0 38 chr15 94769524 94769736 -8725238 + (CATA)n Simple_repeat Simple_repeat 1 203 0 3 1308 227 215 27 36 chr15 94769777 94769888 -8725086 + (CATA)n Simple_repeat Simple_repeat 4 113 0 3 1308 218 136 23 0 chr15 94771112 94771156 -8723818 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1308 537 333 32 13 chr15 94772150 94772308 -8722666 + RSINE1 SINE B4 3 163 -2 3 1308 207 0 0 0 chr15 94772332 94772355 -8722619 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 3 1308 328 256 155 31 chr15 94772927 94773056 -8721918 - B1F SINE Alu 0 149 5 3 1308 306 291 115 47 chr15 94773056 94773075 -8721899 - ID_B1 SINE B4 0 224 67 3 1308 698 303 15 35 chr15 94773452 94773611 -8721363 + B3A SINE B2 1 157 -41 4 1308 321 26 0 0 chr15 94773611 94773649 -8721325 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1308 698 303 15 35 chr15 94773649 94773691 -8721283 + B3A SINE B2 158 198 0 4 1308 331 322 186 25 chr15 94773692 94773904 -8721070 + L1M2 LINE L1 3766 4011 -2135 4 1308 2618 131 2 28 chr15 94773904 94774297 -8720677 + Lx2B LINE L1 6618 7000 0 4 1308 331 322 186 25 chr15 94774297 94774450 -8720524 + L1M2 LINE L1 4009 4190 -1956 4 1308 349 290 76 96 chr15 94774827 94775071 -8719903 + B4 SINE B4 22 274 -18 4 1308 891 181 0 0 chr15 94775141 94775405 -8719569 + (CA)n Simple_repeat Simple_repeat 1 264 0 4 1308 180 0 0 0 chr15 94776086 94776106 -8718868 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1308 381 253 106 58 chr15 94776391 94776580 -8718394 + L1MC4 LINE L1 6450 6647 -1138 4 1308 456 314 49 33 chr15 94776896 94777140 -8717834 + L1MC4 LINE L1 6660 6907 -1135 4 1308 2609 148 35 0 chr15 94777506 94777911 -8717063 + MTC LTR MaLR 1 419 -2 4 1308 459 0 0 0 chr15 94778380 94778431 -8716543 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 4 1308 302 324 0 0 chr15 94779062 94779173 -8715801 + (CA)n Simple_repeat Simple_repeat 2 112 0 4 1308 285 29 0 0 chr15 94780352 94780386 -8714588 + (GA)n Simple_repeat Simple_repeat 1 34 0 4 1308 1007 142 6 0 chr15 94781440 94781616 -8713358 + (TCTA)n Simple_repeat Simple_repeat 3 179 0 4 1308 297 0 0 0 chr15 94781642 94781675 -8713299 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 1308 23 0 0 0 chr15 94781677 94781700 -8713274 + AT_rich Low_complexity Low_complexity 1 23 0 4 1308 764 255 113 25 chr15 94781732 94782006 -8712968 + MLT1B LTR MaLR 16 313 -77 4 1308 242 294 0 32 chr15 94782337 94782432 -8712542 + Tigger15a DNA TcMar 508 599 -116 4 1308 188 259 74 0 chr15 94783180 94783234 -8711740 - L2a LINE L2 -2 3424 3367 4 1308 1975 199 26 42 chr15 94783549 94783973 -8711001 - MTC LTR MaLR -1 420 4 4 1308 386 259 52 26 chr15 94784293 94784408 -8710566 + ORR1C2 LTR MaLR 267 384 0 4 1308 2040 161 20 14 chr15 94784621 94784967 -8710007 + ORR1B1 LTR MaLR 47 394 0 4 1308 326 297 163 21 chr15 94786369 94786510 -8708464 - HAL1-3A_ME LINE L1 -414 2444 2284 4 1308 266 265 83 56 chr15 94786695 94786803 -8708171 + L2 LINE L2 2689 2799 -620 4 1308 404 51 0 17 chr15 94787054 94787114 -8707860 + (TG)n Simple_repeat Simple_repeat 1 59 0 4 1308 260 240 40 47 chr15 94787441 94787590 -8707384 - L1M5 LINE L1 -627 5817 5671 4 1308 198 184 60 20 chr15 94787963 94788013 -8706961 + MIR SINE MIR 17 68 -194 4 1308 386 253 123 32 chr15 94788420 94788575 -8706399 - B3A SINE B2 0 216 48 4 1308 487 303 0 0 chr15 94788554 94788663 -8706311 - RSINE1 SINE B4 -55 110 2 4 1308 366 107 0 0 chr15 94789519 94789575 -8705399 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1308 22 0 0 0 chr15 94789659 94789681 -8705293 + AT_rich Low_complexity Low_complexity 1 22 0 4 1308 26 0 0 0 chr15 94789863 94789889 -8705085 + AT_rich Low_complexity Low_complexity 1 26 0 4 1308 1934 236 25 5 chr15 94789889 94790328 -8704646 - Lx5 LINE L1 -8 7042 6595 4 1308 966 165 0 0 chr15 94790329 94790493 -8704481 - L1_Mur3 LINE L1 -353 5524 5361 4 1308 1743 118 14 3 chr15 94790493 94790754 -8704220 - ORR1A2 LTR MaLR -65 302 4 4 1308 16325 154 24 71 chr15 94790755 94793744 -8701230 - L1_Mur3 LINE L1 -1030 4847 2050 4 1308 492 32 0 0 chr15 94793744 94793806 -8701168 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 1308 16325 184 19 54 chr15 94793806 94794954 -8700020 - L1_Mur3 LINE L1 -3828 2049 891 4 1308 702 322 34 13 chr15 94795669 94795905 -8699069 - B4A SINE B4 -51 241 1 4 1308 309 280 76 81 chr15 94796284 94796344 -8698630 - L1MEg LINE L1 -4493 1591 1533 4 1308 408 71 0 0 chr15 94796344 94796400 -8698574 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 4 1308 309 280 76 81 chr15 94796400 94796537 -8698437 - L1MEg LINE L1 -4552 1532 1397 4 1308 498 244 149 25 chr15 94796688 94797003 -8697971 - L1M2 LINE L1 -1622 4521 4168 4 1308 474 18 0 0 chr15 94797009 94797064 -8697910 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 1308 861 167 150 5 chr15 94797177 94797370 -8697604 - URR1B DNA MER1_type 0 225 5 4 1308 2035 166 31 6 chr15 94797813 94797959 -8697015 + ORR1B2 LTR MaLR 1 155 -212 4 1308 243 0 0 0 chr15 94797959 94797986 -8696988 + (TCTG)n Simple_repeat Simple_repeat 3 29 0 4 1308 2035 166 31 6 chr15 94797986 94798197 -8696777 + ORR1B2 LTR MaLR 156 367 0 4 1308 1029 255 55 46 chr15 94798531 94798860 -8696114 - ORR1E LTR MaLR -17 342 11 4 1308 6359 56 4 6 chr15 94799654 94800457 -8694517 + L1Md_F2 LINE L1 5778 6578 -4 4 1308 180 0 0 0 chr15 94801442 94801462 -8693512 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1308 311 312 71 8 chr15 94802394 94802520 -8692454 - MIR SINE MIR -66 196 63 4 1308 278 197 0 15 chr15 94802723 94802754 -8692220 + polypyrimidine Low_complexity Low_complexity 36 66 0 4 1308 207 69 0 0 chr15 94802754 94802783 -8692191 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1308 278 197 0 15 chr15 94802783 94802818 -8692156 + polypyrimidine Low_complexity Low_complexity 1 35 0 4 1308 409 241 7 21 chr15 94802817 94802957 -8692017 + (CA)n Simple_repeat Simple_repeat 1 138 0 4 1308 212 333 11 11 chr15 94803026 94803117 -8691857 + (CA)n Simple_repeat Simple_repeat 1 91 0 4 1308 316 281 15 23 chr15 94803510 94803641 -8691333 + (TA)n Simple_repeat Simple_repeat 1 130 0 4 1308 26 0 0 0 chr15 94804155 94804181 -8690793 + AT_rich Low_complexity Low_complexity 1 26 0 4 1308 180 0 0 0 chr15 94804275 94804295 -8690679 + (TTA)n Simple_repeat Simple_repeat 2 21 0 4 1308 3747 63 2 2 chr15 94804295 94804772 -8690202 - L1_Mus2 LINE L1 -16 6550 6074 4 1308 879 197 274 125 chr15 94804942 94805351 -8689623 + MT2A LTR ERVL 1 458 -75 4 1308 567 0 0 0 chr15 94805351 94805414 -8689560 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 1308 243 0 0 0 chr15 94805414 94805440 -8689534 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1308 879 197 274 125 chr15 94805440 94805493 -8689481 + MT2A LTR ERVL 459 532 -1 4 1308 1127 92 0 0 chr15 94806294 94806435 -8688539 + B1_Mus1 SINE Alu 3 143 -5 4 1308 240 35 0 0 chr15 94806443 94806472 -8688502 + (A)n Simple_repeat Simple_repeat 1 29 0 4 1308 366 304 0 0 chr15 94806725 94806925 -8688049 + (TG)n Simple_repeat Simple_repeat 1 200 0 4 1308 360 286 176 65 chr15 94806945 94807207 -8687767 - B4A SINE B4 0 292 2 4 1308 275 350 73 37 chr15 94807835 94808108 -8686866 + MER33 DNA MER1_type 15 297 -27 4 1308 185 200 33 0 chr15 94808224 94808284 -8686690 + T-rich Low_complexity Low_complexity 1 62 0 4 1308 362 285 13 13 chr15 94808304 94808413 -8686561 - PB1D10 SINE Alu 0 120 12 4 1308 601 273 27 25 chr15 94808482 94808688 -8686286 - B3A SINE B2 -14 202 1 4 1308 225 94 0 0 chr15 94808734 94808766 -8686208 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 4 1308 2075 246 40 20 chr15 94808769 94809405 -8685569 - Lx5 LINE L1 -19 7031 6456 4 1308 704 273 55 116 chr15 94809934 94810245 -8684729 - B4A SINE B4 0 292 1 4 1308 543 285 11 11 chr15 94810265 94810439 -8684535 - Lx9 LINE L1 -681 6963 6790 4 1308 586 340 26 47 chr15 94810536 94810959 -8684015 + Lx9 LINE L1 7028 7441 -203 4 1308 663 46 0 0 chr15 94810986 94811073 -8683901 + (GA)n Simple_repeat Simple_repeat 2 88 0 4 1308 22 0 0 0 chr15 94811169 94811191 -8683783 + AT_rich Low_complexity Low_complexity 1 22 0 4 1308 3201 153 84 19 chr15 94811702 94812276 -8682698 - RMER19C LTR ERVK 0 611 1 4 1308 1499 212 166 38 chr15 94813055 94813477 -8681497 - RMER19C LTR ERVK 0 611 136 4 1308 182 344 54 54 chr15 94813662 94813828 -8681146 - L2 LINE L2 -611 2808 2643 4 1308 347 299 0 23 chr15 94813862 94813992 -8680982 - L1MB5 LINE L1 -8 6166 6040 4 1308 324 311 163 9 chr15 94814035 94814256 -8680718 - L1MB5 LINE L1 -199 5979 5725 4 1308 284 219 30 40 chr15 94814687 94814787 -8680187 - L1M5 LINE L1 -435 5729 5631 4 1308 436 288 86 7 chr15 94814800 94814940 -8680034 - RMER5 LTR ERV1 -1 533 383 4 1308 2586 240 68 84 chr15 94815502 94817124 -8677850 - RMER1B Other Other -11 1055 15 4 1308 182 37 0 36 chr15 94818073 94818101 -8676873 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 4 1308 363 258 40 20 chr15 94818177 94818276 -8676698 + RSINE1 SINE B4 3 103 -62 4 1308 2422 57 3 59 chr15 94818280 94818618 -8676356 - ORR1A2 LTR MaLR -8 319 1 4 1308 214 258 56 70 chr15 94818618 94818686 -8676288 + RSINE1 SINE B4 99 165 0 4 1308 471 113 0 0 chr15 94818687 94818758 -8676216 + (TA)n Simple_repeat Simple_repeat 1 71 0 4 1308 237 65 0 0 chr15 94818760 94818791 -8676183 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1308 226 300 0 0 chr15 94819559 94819629 -8675345 - L1M4 LINE L1 -734 5434 5365 4 1308 186 133 0 0 chr15 94819712 94819742 -8675232 + (TC)n Simple_repeat Simple_repeat 1 30 0 4 1308 572 286 67 84 chr15 94819742 94820080 -8674894 - L1M4 LINE L1 -844 5302 4980 4 1308 357 109 0 0 chr15 94820080 94820135 -8674839 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1308 572 286 67 84 chr15 94820135 94820262 -8674712 - L1M4 LINE L1 -1167 4979 4845 4 1308 238 360 35 26 chr15 94820272 94820386 -8674588 + RMER12 LTR ERVK 736 850 -472 4 1308 377 198 8 22 chr15 94820387 94820521 -8674453 + (TA)n Simple_repeat Simple_repeat 2 133 0 4 1308 843 275 37 3 chr15 94820543 94820871 -8674103 - L1M4 LINE L1 -1487 4659 4321 4 1308 383 244 43 43 chr15 94820881 94821022 -8673952 - B1F1 SINE Alu -8 141 1 4 1308 234 293 65 55 chr15 94821615 94821814 -8673160 - L1M4 LINE L1 -2444 3702 3502 4 1308 21 57 0 0 chr15 94822040 94822075 -8672899 + AT_rich Low_complexity Low_complexity 1 35 0 4 1308 542 245 77 5 chr15 94822422 94822643 -8672331 - L1MC LINE L1 -1498 4648 4412 4 1308 24 67 0 0 chr15 94823348 94823393 -8671581 + AT_rich Low_complexity Low_complexity 1 45 0 4 1308 432 37 0 0 chr15 94823457 94823511 -8671463 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1308 1531 201 14 166 chr15 94823522 94824000 -8670974 - MTD LTR MaLR 0 419 17 4 1308 216 0 0 0 chr15 94824000 94824024 -8670950 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4 1308 1531 201 14 166 chr15 94824024 94824039 -8670935 - MTD LTR MaLR -403 16 2 4 1308 279 0 0 0 chr15 94824185 94824216 -8670758 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1308 1404 35 0 0 chr15 94824528 94824698 -8670276 + (TG)n Simple_repeat Simple_repeat 1 170 0 4 1308 24 32 0 0 chr15 94825321 94825352 -8669622 + AT_rich Low_complexity Low_complexity 1 31 0 5 1308 779 171 31 31 chr15 94825403 94825509 -8669465 - Lx3B LINE L1 -2 6971 6864 5 1308 447 35 0 0 chr15 94825509 94825566 -8669408 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1308 779 171 31 31 chr15 94825566 94825622 -8669352 - Lx3B LINE L1 -110 6863 6810 5 1308 23 68 0 0 chr15 94826948 94826992 -8667982 + AT_rich Low_complexity Low_complexity 1 44 0 5 1308 279 0 0 0 chr15 94827283 94827314 -8667660 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1308 2318 73 13 0 chr15 94827646 94827960 -8667014 - ORR1A2 LTR MaLR -8 319 2 5 1308 506 335 86 28 chr15 94827967 94828382 -8666592 - MLT1E1 LTR MaLR -204 423 52 5 1308 1194 189 14 0 chr15 94829311 94829533 -8665441 + URR1B DNA MER1_type 1 225 0 5 1308 510 83 0 0 chr15 94829639 94829711 -8665263 + (CA)n Simple_repeat Simple_repeat 2 73 0 5 1308 1004 206 91 173 chr15 94829731 94830148 -8664826 + ORR1C2 LTR MaLR 2 384 0 5 1308 345 355 91 13 chr15 94830274 94830428 -8664546 + Tigger5 DNA MER2_type 2 167 -2239 5 1308 228 86 0 0 chr15 94830521 94830556 -8664418 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1308 1139 62 7 7 chr15 94830556 94830703 -8664271 - B1_Mus2 SINE Alu 0 147 1 5 1308 622 272 23 27 chr15 94831453 94831672 -8663302 - ID_B1 SINE B4 -6 218 1 5 1308 243 88 0 0 chr15 94832835 94832869 -8662105 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1308 23 0 0 0 chr15 94833773 94833796 -8661178 + AT_rich Low_complexity Low_complexity 1 23 0 5 1308 270 0 0 0 chr15 94833804 94833834 -8661140 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1308 252 0 0 0 chr15 94833836 94833864 -8661110 + (GA)n Simple_repeat Simple_repeat 1 28 0 5 1308 541 276 0 0 chr15 94833974 94834079 -8660895 - B3 SINE B2 -111 105 1 5 1308 3837 243 126 15 chr15 94834290 94835541 -8659433 + Lx9 LINE L1 6201 7643 -1 5 1308 25 0 0 0 chr15 94836385 94836410 -8658564 + AT_rich Low_complexity Low_complexity 1 25 0 5 1308 299 260 29 73 chr15 94836955 94837092 -8657882 - L1M3 LINE L1 -758 5533 5403 5 1308 783 189 70 41 chr15 94837085 94837256 -8657718 - Lx6 LINE L1 -51 7409 7234 5 1308 595 289 162 44 chr15 94837256 94838122 -8656852 - L1M3 LINE L1 -763 5377 4354 5 1308 1871 118 0 0 chr15 94838128 94838399 -8656575 - MT2B2 LTR ERVL 0 584 314 5 1308 1207 76 14 0 chr15 94838537 94838682 -8656292 - B1_Mm SINE Alu 0 147 1 5 1308 331 71 0 0 chr15 94838682 94838724 -8656250 - ORR1A2 LTR MaLR -3 391 350 5 1308 3767 18 0 0 chr15 94838725 94839264 -8655710 - L1Md_T LINE L1 -576 6006 5468 5 1308 5099 32 2 0 chr15 94839264 94839825 -8655149 + L1Md_T LINE L1 6021 6582 0 5 1308 2052 94 31 0 chr15 94839826 94840114 -8654860 - ORR1A2 LTR MaLR -30 297 1 5 1308 371 299 125 21 chr15 94840308 94840546 -8654428 - L1M3 LINE L1 -2179 3961 3702 5 1308 234 0 0 0 chr15 94840557 94840583 -8654391 + (CAGT)n Simple_repeat Simple_repeat 4 29 0 5 1308 234 338 91 5 chr15 94840583 94840782 -8654192 - L1M3 LINE L1 -2477 3663 3448 5 1308 2231 82 26 3 chr15 94840786 94841091 -8653883 - ORR1A2 LTR MaLR 0 327 16 5 1308 221 159 0 0 chr15 94841560 94841604 -8653370 + T-rich Low_complexity Low_complexity 1 44 0 5 1308 435 78 0 0 chr15 94842061 94842125 -8652849 + (TG)n Simple_repeat Simple_repeat 2 65 0 5 1308 204 200 0 0 chr15 94842126 94842176 -8652798 + GA-rich Low_complexity Low_complexity 6 55 0 5 1308 267 31 0 0 chr15 94842219 94842251 -8652723 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 1308 3152 78 16 32 chr15 94843936 94844375 -8650599 - L1_Mus3 LINE L1 -2 6636 6205 5 1308 2572 188 97 13 chr15 94844380 94844979 -8649995 - L1Md_F3 LINE L1 -16 6568 5920 5 1308 4285 81 2 2 chr15 94844990 94845619 -8649355 + L1_Mus3 LINE L1 5288 5917 -721 5 1308 665 173 0 11 chr15 94847949 94848130 -8646844 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 1308 605 185 0 6 chr15 94848176 94848355 -8646619 + (TG)n Simple_repeat Simple_repeat 1 178 0 5 1308 258 239 0 0 chr15 94848361 94848432 -8646542 + (TCTG)n Simple_repeat Simple_repeat 4 74 0 5 1308 334 313 0 0 chr15 94849321 94849404 -8645570 + ID4_ SINE ID 1 83 0 5 1308 737 303 39 13 chr15 94849815 94850126 -8644848 + L1MA7 LINE L1 5972 6290 -1 5 1308 663 216 145 9 chr15 94851718 94852013 -8642961 + MTD LTR MaLR 34 419 0 5 1308 440 83 42 0 chr15 94853280 94853352 -8641622 + (GGGGA)n Simple_repeat Simple_repeat 4 78 0 5 1308 378 254 0 0 chr15 94853845 94853916 -8641058 + B1_Mur2 SINE Alu 71 141 -8 5 1308 255 173 0 0 chr15 94855208 94855260 -8639714 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1308 1506 198 90 71 chr15 94855263 94855635 -8639339 - MTD LTR MaLR -12 407 44 5 1308 186 43 0 0 chr15 94855644 94855667 -8639307 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1308 1017 314 7 11 chr15 94856013 94856293 -8638681 - B4A SINE B4 -10 282 4 5 1308 540 0 0 0 chr15 94856321 94856381 -8638593 + (TC)n Simple_repeat Simple_repeat 2 61 0 5 1308 1239 56 0 0 chr15 94856618 94856762 -8638212 + B1_Mus1 SINE Alu 5 148 0 5 1308 196 71 71 0 chr15 94856764 94856806 -8638168 + (CAAAAA)n Simple_repeat Simple_repeat 5 49 0 5 1308 577 171 71 0 chr15 94858276 94858416 -8636558 - Lx6 LINE L1 -7 7453 7304 5 1308 1178 56 7 7 chr15 94858418 94858563 -8636411 - B1_Mus1 SINE Alu -1 147 3 5 1308 469 30 15 15 chr15 94858638 94858706 -8636268 + (TTTTG)n Simple_repeat Simple_repeat 3 70 0 5 1308 234 336 62 26 chr15 94858713 94858826 -8636148 - Lx8 LINE L1 -147 7326 7210 5 1308 306 0 0 0 chr15 94860490 94860524 -8634450 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1308 222 211 109 109 chr15 94861144 94861162 -8633812 - B2_Mm2 SINE B2 -14 181 142 5 1308 598 260 31 39 chr15 94861162 94861184 -8633790 - RSINE1 SINE B4 -2 163 142 5 1308 651 125 0 0 chr15 94861184 94861288 -8633686 + (CA)n Simple_repeat Simple_repeat 1 104 0 5 1308 222 211 109 109 chr15 94861288 94861375 -8633599 - B2_Mm2 SINE B2 -54 141 54 5 1308 598 260 31 39 chr15 94861375 94861393 -8633581 - RSINE1 SINE B4 -24 141 37 5 1308 1119 80 0 0 chr15 94861595 94861807 -8633167 + (CA)n Simple_repeat Simple_repeat 1 212 0 5 1308 24 0 0 0 chr15 94862029 94862053 -8632921 + AT_rich Low_complexity Low_complexity 1 24 0 5 1308 213 39 0 0 chr15 94862690 94862716 -8632258 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1308 230 366 11 11 chr15 94863761 94863855 -8631119 + B1F SINE Alu 1 94 -55 5 1308 246 237 0 30 chr15 94863867 94863967 -8631007 + GA-rich Low_complexity Low_complexity 1 97 0 5 1308 235 243 99 14 chr15 94865018 94865089 -8629885 - MLT1A1 LTR MaLR 0 408 332 5 1308 2188 214 73 85 chr15 94865517 94866197 -8628777 + Lx9 LINE L1 6925 7596 -48 5 1308 3229 168 37 16 chr15 94866209 94866456 -8628518 - L1_Mur2 LINE L1 -156 5721 5466 5 1308 297 0 0 0 chr15 94866456 94866489 -8628485 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1308 3229 168 37 16 chr15 94866489 94866865 -8628109 - L1_Mur2 LINE L1 -412 5465 5086 5 1308 425 66 16 0 chr15 94867318 94867379 -8627595 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 1308 360 0 0 0 chr15 94867523 94867563 -8627411 + (GA)n Simple_repeat Simple_repeat 2 41 0 5 1308 441 0 0 0 chr15 94867563 94867612 -8627362 + (GAA)n Simple_repeat Simple_repeat 3 51 0 5 1308 267 31 0 0 chr15 94867917 94867949 -8627025 + (CAG)n Simple_repeat Simple_repeat 3 34 0 5 1308 477 0 0 0 chr15 94868911 94868964 -8626010 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1308 197 293 28 83 chr15 94869252 94869360 -8625614 - L4 LINE RTE -817 1212 1111 5 1308 1026 215 5 0 chr15 94870351 94870546 -8624428 + URR1B DNA MER1_type 1 196 -29 5 1308 2152 123 111 32 chr15 94871044 94871207 -8623767 - MTC LTR MaLR -8 413 224 5 1308 2502 82 28 0 chr15 94871207 94871525 -8623449 - ORR1A2 LTR MaLR 0 327 1 5 1308 2152 123 111 32 chr15 94871525 94871740 -8623234 - MTC LTR MaLR -198 223 5 5 1308 338 284 134 27 chr15 94871761 94871985 -8622989 + L1MB3 LINE L1 5906 6153 -30 5 1308 27 0 0 0 chr15 94872181 94872208 -8622766 + AT_rich Low_complexity Low_complexity 1 27 0 5 1308 258 105 0 0 chr15 94873497 94873535 -8621439 + (GA)n Simple_repeat Simple_repeat 2 39 0 5 1308 540 186 29 6 chr15 94873692 94873865 -8621109 + (TG)n Simple_repeat Simple_repeat 2 178 0 5 1308 217 132 0 0 chr15 94873914 94873952 -8621022 + (CAGA)n Simple_repeat Simple_repeat 2 39 0 5 1308 504 0 0 0 chr15 94875104 94875160 -8619814 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 1308 383 306 3 65 chr15 94875539 94875738 -8619236 - B3A SINE B2 -11 205 21 5 1308 799 137 23 6 chr15 94875862 94876038 -8618936 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 1308 774 258 12 73 chr15 94876047 94876306 -8618668 - RMER15 LTR ERVL -39 536 294 5 1308 207 0 0 0 chr15 94876361 94876384 -8618590 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 5 1308 22 0 0 0 chr15 94877335 94877357 -8617617 + AT_rich Low_complexity Low_complexity 1 22 0 5 1308 215 197 0 47 chr15 94877813 94877877 -8617097 + (CATATA)n Simple_repeat Simple_repeat 4 64 0 5 1308 387 41 0 0 chr15 94877877 94877926 -8617048 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1308 304 222 48 36 chr15 94877927 94878011 -8616963 - L2c LINE L2 -31 3356 3272 5 1308 22 0 0 0 chr15 94878388 94878410 -8616564 + AT_rich Low_complexity Low_complexity 1 22 0 5 1308 183 279 94 39 chr15 94880631 94880758 -8614216 + L2c LINE L2 3055 3188 -199 5 1308 328 274 66 92 chr15 94880864 94881137 -8613837 - RLTR12B LTR ERVK -25 503 238 5 1308 783 256 36 36 chr15 94881114 94881365 -8613609 - RLTR12B LTR ERVK -230 298 48 5 1308 181 328 69 0 chr15 94881601 94881659 -8613315 + L3 LINE CR1 4333 4394 -95 5 1308 21 0 0 0 chr15 94882791 94882812 -8612162 + AT_rich Low_complexity Low_complexity 1 21 0 5 1308 387 43 0 0 chr15 94882836 94882883 -8612091 - HAL1-3A_ME LINE L1 -836 2022 1976 5 1308 315 0 0 0 chr15 94883962 94883997 -8610977 + (TTA)n Simple_repeat Simple_repeat 2 36 0 5 1308 730 252 45 56 chr15 94884148 94884417 -8610557 + RLTR15 LTR ERVK 1 266 -93 5 1308 538 288 100 10 chr15 94884498 94884698 -8610276 + MER2 DNA MER2_type 127 344 -1 5 1308 1848 159 19 112 chr15 94886211 94886630 -8608344 - ORR1C2 LTR MaLR -4 380 1 5 1308 578 314 84 84 chr15 94887524 94887871 -8607103 + ORR1E LTR MaLR 9 355 -4 6 1308 261 302 67 51 chr15 94888981 94889159 -8605815 + MLT2B2 LTR ERVL 380 560 -2 6 1308 242 232 0 35 chr15 94889339 94889397 -8605577 + MTEa LTR MaLR 275 330 -49 6 1308 210 91 0 0 chr15 94889527 94889560 -8605414 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1308 261 0 0 0 chr15 94892009 94892038 -8602936 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1308 378 255 43 0 chr15 94892184 94892278 -8602696 + B4A SINE B4 113 210 -82 6 1308 887 279 54 66 chr15 94892359 94892582 -8602392 - L1MA6 LINE L1 -276 6024 5804 6 1308 1602 261 68 8 chr15 94892582 94893080 -8601894 - MT2A LTR ERVL -4 529 2 6 1308 887 279 54 66 chr15 94893080 94893266 -8601708 - L1MA6 LINE L1 -497 5803 5620 6 1308 930 220 199 23 chr15 94893341 94893648 -8601326 - MTD LTR MaLR -14 405 45 6 1308 280 242 84 0 chr15 94893699 94893794 -8601180 - L1MA6 LINE L1 -818 5479 5377 6 1308 246 318 8 101 chr15 94894139 94894258 -8600716 + PB1D10 SINE Alu 1 108 -9 6 1308 290 194 71 22 chr15 94894386 94894491 -8600483 - L1MA6 LINE L1 -824 5322 5208 6 1308 337 287 43 14 chr15 94894617 94894755 -8600219 - B1F1 SINE Alu -7 142 1 6 1308 384 151 10 31 chr15 94895514 94895610 -8599364 + CT-rich Low_complexity Low_complexity 3 96 0 6 1308 1112 112 0 11 chr15 94895610 94895791 -8599183 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 6 1308 804 21 0 0 chr15 94895798 94895892 -8599082 + (TTCC)n Simple_repeat Simple_repeat 3 96 0 6 1308 646 191 30 5 chr15 94895897 94896032 -8598942 - B1_Mur2 SINE Alu -17 132 1 6 1309 958 193 54 10 chr15 94896784 94896988 -8597986 + B3 SINE B2 2 214 -2 6 1309 585 246 172 6 chr15 94897726 94897906 -8597068 + B3 SINE B2 2 211 -5 6 1309 262 120 18 193 chr15 94898472 94898586 -8596388 - MT2A LTR ERVL -7 526 433 6 1309 1087 91 16 178 chr15 94898583 94898825 -8596149 - MT2A LTR ERVL -327 206 4 6 1309 363 299 50 25 chr15 94899092 94899253 -8595721 - L2a LINE L2 -7 3419 3255 6 1309 905 330 66 13 chr15 94899712 94900105 -8594869 + Lx8 LINE L1 7058 7471 -2 6 1309 245 126 33 244 chr15 94901847 94902089 -8592885 + RMER17C LTR ERVK 78 268 -142 6 1309 225 154 0 0 chr15 94902092 94902131 -8592843 + (CATA)n Simple_repeat Simple_repeat 1 39 0 6 1309 27 29 0 0 chr15 94907261 94907295 -8587679 + AT_rich Low_complexity Low_complexity 1 34 0 6 1309 219 370 0 0 chr15 94907312 94907393 -8587581 - MER5A DNA MER1_type -39 150 70 6 1309 717 12 0 0 chr15 94907749 94907831 -8587143 + (GA)n Simple_repeat Simple_repeat 1 82 0 6 1309 742 252 83 83 chr15 94908203 94908481 -8586493 + MTC-int LTR MaLR 813 1321 -259 6 1309 1118 277 47 6 chr15 94908493 94908834 -8586140 + ORR1D2 LTR MaLR 6 360 -10 6 1309 1965 211 34 15 chr15 94908841 94909249 -8585725 + MTC LTR MaLR 5 420 -1 6 1309 2638 251 40 50 chr15 94909295 94910112 -8584862 + ORR1D2-int LTR MaLR 562 1370 0 6 1309 943 280 77 40 chr15 94910112 94910465 -8584509 + ORR1D2 LTR MaLR 1 366 -4 6 1309 265 264 136 11 chr15 94910473 94910561 -8584413 + MTE2a-int LTR MaLR 1478 1576 -4 6 1309 686 266 78 149 chr15 94910571 94910968 -8584006 + MTE2a LTR MaLR 11 379 0 6 1309 186 133 0 0 chr15 94913647 94913677 -8581297 + (TTA)n Simple_repeat Simple_repeat 2 31 0 6 1309 545 76 0 12 chr15 94913785 94913865 -8581109 + (TA)n Simple_repeat Simple_repeat 1 79 0 6 1309 405 0 0 0 chr15 94913871 94913916 -8581058 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1309 384 22 0 0 chr15 94914696 94914741 -8580233 + (TTTTTG)n Simple_repeat Simple_repeat 3 47 0 6 1309 212 274 136 58 chr15 94917813 94917968 -8577006 - B3 SINE B2 -2 214 48 6 1309 36837 64 5 12 chr15 94917969 94924098 -8570876 - L1Md_F2 LINE L1 -12 6570 485 6 1309 21 0 0 0 chr15 94924651 94924672 -8570302 + AT_rich Low_complexity Low_complexity 1 21 0 6 1309 243 0 0 0 chr15 94926789 94926816 -8568158 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 6 1309 349 274 80 48 chr15 94929520 94929708 -8565266 - MIRc SINE MIR -61 207 14 6 1309 306 0 0 0 chr15 94929721 94929755 -8565219 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1309 188 86 0 28 chr15 94930108 94930144 -8564830 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1309 817 174 25 6 chr15 94931494 94931656 -8563318 - URR1B DNA MER1_type -60 165 1 6 1309 280 272 19 87 chr15 94931512 94931673 -8563301 + CYRA11_Mm Unknown Y-chromosome 254 403 -214 6 1309 1001 197 8 47 chr15 94933310 94933544 -8561430 + URR1A DNA MER1_type 1 225 -1 6 1309 302 246 47 74 chr15 94935420 94935579 -8559395 + MERVL_2A-int LTR ERVL 1995 2258 -3503 6 1309 1857 98 81 0 chr15 94935582 94935879 -8559095 - ORR1A4 LTR MaLR -8 321 1 6 1309 306 310 0 0 chr15 94936001 94936072 -8558902 + RMER1B Other Other 445 515 -551 6 1309 3087 181 91 59 chr15 94936072 94936754 -8558220 + RMER1B Other Other 363 1066 0 6 1309 342 157 36 0 chr15 94937405 94937488 -8557486 + GA-rich Low_complexity Low_complexity 4 89 0 6 1309 204 146 73 0 chr15 94938104 94938145 -8556829 + (CAGAGA)n Simple_repeat Simple_repeat 4 47 0 6 1309 195 69 0 0 chr15 94938145 94938174 -8556800 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1309 507 17 0 0 chr15 94938174 94938233 -8556741 + (GA)n Simple_repeat Simple_repeat 2 61 0 6 1309 218 156 22 0 chr15 94939669 94939714 -8555260 + (TGAA)n Simple_repeat Simple_repeat 4 49 0 6 1309 473 264 78 128 chr15 94939774 94940150 -8554824 + ORR1E LTR MaLR 1 374 -5 6 1309 751 265 71 41 chr15 94940468 94940806 -8554168 + L1_Mur3 LINE L1 825 1172 -6540 6 1309 2750 110 7 9 chr15 94941084 94941505 -8553469 + Lx2 LINE L1 6577 6996 -1 6 1309 234 0 0 0 chr15 94942335 94942361 -8552613 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 6 1309 494 289 63 59 chr15 94942597 94942836 -8552138 + LTR82A LTR ERVL 13 252 -620 6 1309 334 352 29 42 chr15 94942868 94943108 -8551866 + LTR82A LTR ERVL 383 619 -253 6 1309 407 324 129 12 chr15 94943613 94943869 -8551105 + Lx8 LINE L1 6669 6954 -519 6 1309 1102 69 23 6 chr15 94943906 94944081 -8550893 + (GA)n Simple_repeat Simple_repeat 2 179 0 6 1309 787 161 35 0 chr15 94944094 94944320 -8550654 + GA-rich Low_complexity Low_complexity 1 233 0 6 1309 270 0 0 0 chr15 94944320 94944350 -8550624 + (ATTG)n Simple_repeat Simple_repeat 4 33 0 6 1309 681 171 0 8 chr15 94944606 94944724 -8550250 + MTC LTR MaLR 3 119 -302 6 1309 621 279 39 10 chr15 94945056 94945259 -8549715 + ID_B1 SINE B4 1 209 -15 6 1309 689 274 104 34 chr15 94945361 94945779 -8549195 - RMER15 LTR ERVL -3 572 1 6 1309 1647 283 50 13 chr15 94946045 94946521 -8548453 - RMER15-int LTR ERVL -345 4654 4161 6 1309 453 292 72 14 chr15 94946670 94946809 -8548165 - RMER15-int LTR ERVL -2775 2224 2078 6 1309 731 123 0 8 chr15 94947084 94947207 -8547767 + (TTTC)n Simple_repeat Simple_repeat 3 124 0 6 1309 1927 298 65 52 chr15 94947290 94948058 -8546916 - RMER15-int LTR ERVL -3365 1634 852 6 1309 4701 132 44 28 chr15 94948058 94948783 -8546191 - RMER19A LTR ERVK 0 737 1 6 1309 1927 298 65 52 chr15 94948783 94948848 -8546126 - RMER15-int LTR ERVL -4148 851 790 6 1309 507 344 53 38 chr15 94948849 94949112 -8545862 + RMER15 LTR ERVL 309 575 0 6 1309 359 387 47 4 chr15 94949478 94949714 -8545260 + RMER15-int LTR ERVL 431 676 -4323 6 1309 432 248 38 46 chr15 94949746 94949877 -8545097 - RMER15 LTR ERVL -445 130 1 6 1309 329 281 39 64 chr15 94950499 94950569 -8544405 + L1MCa LINE L1 3 68 -5977 6 1309 1731 37 0 0 chr15 94950569 94950759 -8544215 + B2_Mm1t SINE B2 3 192 -1 6 1309 329 281 39 64 chr15 94950759 94950844 -8544130 + L1MCa LINE L1 69 154 -5891 6 1309 566 294 15 7 chr15 94950924 94951061 -8543913 + RSINE1 SINE B4 23 160 -5 6 1309 185 119 0 23 chr15 94951077 94951120 -8543854 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 6 1309 461 283 46 42 chr15 94951312 94951552 -8543422 + RLTR15 LTR ERVK 102 342 -17 6 1309 443 295 94 11 chr15 94951682 94951949 -8543025 + L1MCa LINE L1 1773 2061 -4690 6 1309 423 0 0 0 chr15 94952013 94952060 -8542914 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1309 535 326 20 40 chr15 94952132 94952333 -8542641 - MLT1B LTR MaLR -2 388 192 6 1309 730 312 33 77 chr15 94952492 94952884 -8542090 - MTEa LTR MaLR -4 375 1 6 1309 403 290 128 50 chr15 94952887 94953246 -8541728 + L1M2 LINE L1 4820 5206 -937 6 1309 210 86 82 49 chr15 94953246 94953307 -8541667 + (TTAAA)n Simple_repeat Simple_repeat 5 67 0 6 1309 419 293 58 43 chr15 94953350 94953628 -8541346 + L1M4 LINE L1 5287 5568 -616 6 1309 1292 183 191 111 chr15 94953910 94954298 -8540676 - MT2A LTR ERVL -114 419 1 6 1309 1121 268 142 22 chr15 94954354 94954719 -8540255 - MTD LTR MaLR 0 421 18 6 1309 264 150 0 0 chr15 94954856 94954896 -8540078 + Lx8 LINE L1 6354 6393 -1080 6 1309 654 268 76 57 chr15 94954910 94955202 -8539772 + RLTR12B LTR ERVK 21 315 -253 6 1309 360 0 0 0 chr15 94955202 94955242 -8539732 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 1309 575 92 0 11 chr15 94955239 94955327 -8539647 + (GAA)n Simple_repeat Simple_repeat 3 89 0 6 1309 717 12 0 0 chr15 94955348 94955430 -8539544 + (GGAGA)n Simple_repeat Simple_repeat 4 85 0 6 1309 379 293 8 8 chr15 94955708 94955832 -8539142 + Lx8 LINE L1 6400 6523 -950 6 1309 934 319 58 23 chr15 94955873 94956268 -8538706 + L1MC3 LINE L1 6491 6899 -886 6 1309 614 296 150 12 chr15 94956716 94957211 -8537763 + L1MC3 LINE L1 6891 7454 -331 6 1309 2788 276 62 58 chr15 94957213 94958627 -8536347 + L1_Mur3 LINE L1 2336 3755 -2125 6 1309 2729 173 82 19 chr15 94958627 94959163 -8535811 + RLTR26 LTR ERVK 1 570 -72 6 1309 5940 108 42 15 chr15 94959842 94959959 -8535015 - Lx LINE L1 -7 6647 6535 6 1309 186 71 0 0 chr15 94959959 94959987 -8534987 + (CCCA)n Simple_repeat Simple_repeat 2 29 0 6 1309 5940 108 42 15 chr15 94959987 94960727 -8534247 - Lx LINE L1 -120 6534 5769 6 1309 266 318 46 9 chr15 94960727 94960835 -8534139 - MIR SINE MIR -112 150 39 6 1309 579 29 0 0 chr15 94960907 94960976 -8533998 + (ATGGTG)n Simple_repeat Simple_repeat 4 72 0 6 1309 211 284 85 12 chr15 94961967 94962049 -8532925 + MIR SINE MIR 84 171 -91 6 1309 1426 290 40 81 chr15 94962634 94962808 -8532166 + RLTR18 LTR ERVK 1 161 -455 6 1309 5209 58 37 18 chr15 94962808 94963462 -8531512 - L1Md_F2 LINE L1 -1 6581 5916 6 1309 1426 290 40 81 chr15 94963462 94963929 -8531045 + RLTR18 LTR ERVK 162 616 0 6 1309 2264 106 15 15 chr15 94964012 94964349 -8530625 + Lx2A1 LINE L1 6672 7008 0 6 1309 180 0 0 0 chr15 94965667 94965687 -8529287 + (TG)n Simple_repeat Simple_repeat 2 21 0 6 1309 2798 149 68 21 chr15 94965687 94966214 -8528760 - RMER15 LTR ERVL -3 572 21 6 1309 238 284 6 6 chr15 94966744 94966921 -8528053 + (CTGTG)n Simple_repeat Simple_repeat 1 177 0 6 1309 186 191 0 0 chr15 94967001 94967048 -8527926 + (CTGTG)n Simple_repeat Simple_repeat 1 47 0 6 1309 195 374 55 55 chr15 94967083 94967247 -8527727 + L2a LINE L2 2985 3148 -278 7 1309 227 291 15 107 chr15 94967347 94967478 -8527496 + LTR16D1 LTR ERVL 374 492 -183 7 1309 847 262 71 68 chr15 94967898 94968265 -8526709 + MLT2B4 LTR ERVL 1 358 -56 7 1309 929 278 59 94 chr15 94968352 94968693 -8526281 + MTEa LTR MaLR 51 379 0 7 1309 348 133 0 0 chr15 94969983 94970043 -8524931 + (TAA)n Simple_repeat Simple_repeat 2 61 0 7 1309 221 336 102 90 chr15 94971130 94971473 -8523501 - L2 LINE L2 -1004 2415 2069 7 1309 1105 222 110 61 chr15 94971764 94972090 -8522884 + RLTR14 LTR ERV1 7 348 -34 7 1309 220 321 170 27 chr15 94972138 94972474 -8522500 - L2 LINE L2 -1684 1735 1352 7 1309 4186 184 82 31 chr15 94973557 94974460 -8520514 + RMER19B LTR ERVK 17 902 0 7 1309 210 342 58 58 chr15 94974707 94974878 -8520096 - L4 LINE RTE -199 1830 1660 7 1309 1250 173 23 78 chr15 94976087 94976344 -8518630 + ORR1D1 LTR MaLR 5 247 -127 7 1309 3620 186 21 37 chr15 94976370 94977103 -8517871 + ORR1D1-int LTR MaLR 799 1506 -3 7 1309 687 184 73 0 chr15 94977110 94977246 -8517728 + ORR1D1 LTR MaLR 1 146 -228 7 1309 1008 116 7 0 chr15 94977243 94977398 -8517576 + URR1A DNA MER1_type 71 226 0 7 1309 441 253 56 28 chr15 94977398 94977416 -8517558 - CYRA11_Mm Unknown Y-chromosome -285 295 149 7 1309 402 234 26 0 chr15 94978141 94978218 -8516756 + B3 SINE B2 127 205 -11 7 1309 387 0 0 0 chr15 94978430 94978473 -8516501 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1309 333 47 0 0 chr15 94978473 94978515 -8516459 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 1309 382 317 18 6 chr15 94978529 94978694 -8516280 - Lx9 LINE L1 -183 7461 7295 7 1309 4350 171 33 15 chr15 94981719 94982785 -8512189 + Lx5 LINE L1 901 2046 -3831 7 1309 357 24 0 0 chr15 94982789 94982831 -8512143 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1309 8452 156 33 3 chr15 94982870 94984477 -8510497 + Lx5 LINE L1 4384 6041 -1009 7 1309 417 149 0 63 chr15 94984477 94984556 -8510418 - RLTR9A2 LTR ERVK 0 383 310 7 1309 1413 71 0 0 chr15 94984555 94984739 -8510235 - RLTR9A2 LTR ERVK -199 184 1 7 1309 516 242 72 6 chr15 94984739 94984905 -8510069 + Lx5 LINE L1 6036 6212 -838 7 1309 728 250 56 114 chr15 94984994 94985184 -8509790 - RLTR11B LTR ERVK -65 388 221 7 1309 3271 72 0 17 chr15 94985184 94985591 -8509383 + MTB LTR MaLR 1 400 0 7 1309 849 127 0 0 chr15 94985597 94985731 -8509243 + (TTC)n Simple_repeat Simple_repeat 2 135 0 7 1309 728 250 56 114 chr15 94985731 94985944 -8509030 - RLTR11B LTR ERVK -239 214 2 7 1309 3426 232 41 35 chr15 94985944 94986714 -8508260 + Lx5 LINE L1 6214 6990 -60 7 1309 378 0 0 0 chr15 94986714 94986756 -8508218 + (GA)n Simple_repeat Simple_repeat 1 42 0 7 1309 3426 232 41 35 chr15 94986756 94986812 -8508162 + Lx5 LINE L1 6991 7045 -5 7 1309 1891 142 43 17 chr15 94989140 94989441 -8505533 - Lx3C LINE L1 0 6976 6668 7 1309 520 320 7 7 chr15 94989479 94989627 -8505347 - MTEa LTR MaLR -231 148 1 7 1309 224 125 241 89 chr15 94989944 94990023 -8504951 + MIR SINE MIR 114 204 -58 7 1309 680 338 5 5 chr15 94990148 94990371 -8504603 - ID_B1 SINE B4 -1 223 1 7 1309 3295 58 13 0 chr15 94990614 94990994 -8503980 + IAPEY_LTR LTR ERVK 1 385 0 7 1309 5288 192 46 17 chr15 94991004 94992521 -8502453 + Lx7 LINE L1 841 2407 -3473 7 1309 1343 231 104 54 chr15 94992522 94993050 -8501924 - RMER19B LTR ERVK 0 902 189 7 1309 695 135 170 0 chr15 94993050 94993191 -8501783 + Lx7 LINE L1 4505 4669 -1211 7 1309 2401 222 71 55 chr15 94993193 94993638 -8501336 - Lx6 LINE L1 -125 7335 6880 7 1309 378 0 0 0 chr15 94993638 94993680 -8501294 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1309 2401 222 71 55 chr15 94993680 94993782 -8501192 - Lx6 LINE L1 -581 6879 6779 7 1309 997 169 0 0 chr15 94993782 94993942 -8501032 + Lx6 LINE L1 7299 7458 -2 7 1309 44 0 0 0 chr15 94993978 94994022 -8500952 + AT_rich Low_complexity Low_complexity 1 44 0 7 1309 249 250 29 0 chr15 94994168 94994236 -8500738 - L1ME2z LINE L1 -463 5981 5912 7 1309 5562 213 19 24 chr15 94994269 94995725 -8499249 + Lx7 LINE L1 4659 6124 -1572 7 1309 732 277 57 27 chr15 94995734 94996068 -8498906 - RLTR15 LTR ERVK -15 344 1 7 1309 7078 201 72 12 chr15 94996068 94997224 -8497750 + Lx7 LINE L1 6120 7329 -367 7 1309 180 0 0 0 chr15 94997224 94997244 -8497730 + (TTA)n Simple_repeat Simple_repeat 2 21 0 7 1309 7078 201 72 12 chr15 94997244 94997574 -8497400 + Lx7 LINE L1 7330 7695 -1 7 1309 27 0 0 0 chr15 94997606 94997633 -8497341 + AT_rich Low_complexity Low_complexity 1 27 0 7 1309 2015 304 74 17 chr15 94997638 94998410 -8496564 - Lx8 LINE L1 -530 6943 6128 7 1309 936 308 88 30 chr15 94998405 94998880 -8496094 + Lx8 LINE L1 6966 7468 -5 7 1309 407 377 125 35 chr15 94999316 94999747 -8495227 + LTR88b LTR Gypsy? 2 471 -366 7 1309 33 25 0 0 chr15 94999933 94999973 -8495001 + AT_rich Low_complexity Low_complexity 1 40 0 7 1309 2376 173 9 9 chr15 95000487 95000931 -8494043 + MT2A LTR ERVL 1 444 -89 1 1309 195 42 0 0 chr15 95000931 95000955 -8494019 + (TTCA)n Simple_repeat Simple_repeat 2 25 0 2 1309 491 194 9 0 chr15 95000955 95001063 -8493911 + (TG)n Simple_repeat Simple_repeat 2 110 0 3 1309 363 230 212 0 chr15 95002083 95002196 -8492778 + B1_Mur2 SINE Alu 1 137 -12 4 1309 381 22 0 0 chr15 95002196 95002242 -8492732 + (CAAAA)n Simple_repeat Simple_repeat 3 48 0 5 1309 462 305 30 0 chr15 95002621 95002752 -8492222 + B1F2 SINE Alu 2 136 -13 6 1309 1372 84 16 5 chr15 95002764 95002955 -8492019 - B2_Mm2 SINE B2 -1 194 2 7 1309 600 40 0 0 chr15 95003077 95003152 -8491822 + (GAAA)n Simple_repeat Simple_repeat 3 77 0 8 1309 474 286 47 51 chr15 95003273 95003487 -8491487 + MamRep434 DNA TcMar 114 326 -100 9 1309 207 0 0 0 chr15 95004679 95004702 -8490272 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1309 243 349 0 0 chr15 95005137 95005223 -8489751 + L1MEg LINE L1 5 90 -5994 1 1309 411 73 0 0 chr15 95006257 95006312 -8488662 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 1309 493 149 29 0 chr15 95006966 95007181 -8487793 + (TCTA)n Simple_repeat Simple_repeat 1 221 0 1 1309 1197 62 0 0 chr15 95008178 95008323 -8486651 + B1_Mus2 SINE Alu 3 147 0 1 1309 183 42 0 0 chr15 95008326 95008350 -8486624 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1309 24 32 0 0 chr15 95008425 95008456 -8486518 + AT_rich Low_complexity Low_complexity 1 31 0 1 1309 12441 32 2 1 chr15 95009188 95011262 -8483712 - L1Md_F2 LINE L1 -73 6509 4433 1 1309 303 155 35 0 chr15 95012421 95012479 -8482495 - MTD LTR MaLR 0 419 360 1 1309 507 97 104 41 chr15 95012481 95012558 -8482416 - MTD LTR MaLR -15 404 304 1 1309 2232 128 53 0 chr15 95012558 95012917 -8482057 - ORR1C1 LTR MaLR 0 378 1 1 1309 507 159 14 131 chr15 95012917 95013001 -8481973 - MTD LTR MaLR -57 362 277 1 1309 462 324 23 6 chr15 95013129 95013306 -8481668 + MER2 DNA MER2_type 139 318 -27 2 1309 315 203 0 0 chr15 95013925 95013994 -8480980 + CT-rich Low_complexity Low_complexity 3 71 0 2 1309 192 40 0 0 chr15 95015274 95015299 -8479675 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 2 1309 974 261 108 15 chr15 95016224 95016559 -8478415 + MTEb LTR MaLR 1 366 -13 2 1309 378 0 0 0 chr15 95017597 95017639 -8477335 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1309 184 174 152 0 chr15 95017685 95017731 -8477243 - L2b LINE L2 -5 3370 3318 2 1309 964 45 108 50 chr15 95018065 95018204 -8476770 + B1_Mus2 SINE Alu 1 147 0 2 1309 247 25 24 24 chr15 95018209 95018250 -8476724 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 2 1309 587 270 154 33 chr15 95018445 95018744 -8476230 + MLT1A0 LTR MaLR 28 362 -3 2 1309 283 235 10 20 chr15 95018948 95019048 -8475926 + (TA)n Simple_repeat Simple_repeat 1 99 0 2 1309 288 0 0 0 chr15 95019120 95019152 -8475822 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1309 327 49 0 0 chr15 95019298 95019339 -8475635 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1309 1963 96 13 168 chr15 95019702 95020015 -8474959 + ORR1A2 LTR MaLR 1 272 -55 3 1309 1197 41 7 0 chr15 95020015 95020161 -8474813 + B1_Mus1 SINE Alu 1 147 -1 3 1309 1963 96 13 168 chr15 95020161 95020234 -8474740 + ORR1A2 LTR MaLR 273 327 0 3 1309 742 149 20 8 chr15 95020622 95020867 -8474107 + (CA)n Simple_repeat Simple_repeat 1 248 0 3 1309 594 302 255 0 chr15 95021522 95021820 -8473154 + MTEa LTR MaLR 1 374 -5 3 1309 1006 222 18 81 chr15 95021831 95022115 -8472859 - Lx7 LINE L1 -269 7427 7162 3 1309 424 159 34 0 chr15 95022120 95022208 -8472766 + Lx7 LINE L1 7605 7695 -1 3 1309 863 130 7 0 chr15 95022295 95022441 -8472533 + (TA)n Simple_repeat Simple_repeat 1 147 0 3 1309 331 206 46 29 chr15 95022476 95022651 -8472323 + (TA)n Simple_repeat Simple_repeat 1 178 0 3 1309 306 0 0 0 chr15 95023702 95023736 -8471238 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1309 423 238 23 23 chr15 95023737 95023909 -8471065 + (CAGAGA)n Simple_repeat Simple_repeat 3 174 0 4 1309 239 295 9 0 chr15 95023856 95023968 -8471006 + (CA)n Simple_repeat Simple_repeat 2 114 0 4 1309 564 15 0 0 chr15 95023973 95024038 -8470936 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 1309 372 320 11 28 chr15 95024958 95025138 -8469836 + (TATG)n Simple_repeat Simple_repeat 3 179 0 4 1309 429 320 0 17 chr15 95025093 95025271 -8469703 + (TATATG)n Simple_repeat Simple_repeat 1 175 0 4 1309 208 406 6 6 chr15 95025340 95025516 -8469458 + (TG)n Simple_repeat Simple_repeat 1 176 0 4 1309 336 281 5 82 chr15 95025441 95025687 -8469287 + (TATATG)n Simple_repeat Simple_repeat 1 226 0 4 1309 572 240 89 36 chr15 95026059 95026284 -8468690 + B4A SINE B4 50 286 -6 4 1309 378 0 0 0 chr15 95026308 95026350 -8468624 + (TC)n Simple_repeat Simple_repeat 1 42 0 4 1309 564 15 0 0 chr15 95026350 95026414 -8468560 + (CA)n Simple_repeat Simple_repeat 1 65 0 4 1309 262 344 87 20 chr15 95026446 95026642 -8468332 - L2 LINE L2 -473 2946 2738 5 1309 253 316 213 33 chr15 95026741 95027013 -8467961 - LTR52 LTR ERVL -34 387 67 5 1310 213 39 0 0 chr15 95027332 95027358 -8467616 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 5 1310 243 0 0 0 chr15 95028404 95028431 -8466543 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1310 207 100 0 0 chr15 95028431 95028461 -8466513 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 1310 687 255 79 110 chr15 95028486 95028566 -8466408 - B4 SINE B4 -10 282 222 5 1310 609 52 0 0 chr15 95028566 95028643 -8466331 + (TC)n Simple_repeat Simple_repeat 2 78 0 5 1310 687 255 79 110 chr15 95028643 95028853 -8466121 - B4 SINE B4 -71 221 1 5 1310 27 29 0 0 chr15 95028856 95028890 -8466084 + AT_rich Low_complexity Low_complexity 1 34 0 5 1310 1819 115 34 123 chr15 95029536 95029893 -8465081 + ORR1A4 LTR MaLR 1 325 -4 5 1310 232 316 0 48 chr15 95030677 95030760 -8464214 - ID4_ SINE ID 0 83 5 5 1310 762 94 7 41 chr15 95030859 95031004 -8463970 + (TCTA)n Simple_repeat Simple_repeat 2 141 0 6 1310 1072 234 108 9 chr15 95031066 95031389 -8463585 - ORR1D1 LTR MaLR 0 374 20 6 1310 334 267 0 0 chr15 95032487 95032562 -8462412 + ID4 SINE ID 8 82 -1 6 1310 1015 301 125 27 chr15 95032647 95033286 -8461688 - Cheshire DNA MER1_type -328 2092 1391 6 1310 599 261 51 74 chr15 95033286 95033501 -8461473 + B3 SINE B2 1 210 -6 6 1310 3780 71 0 20 chr15 95034194 95034696 -8460278 - L1_Mus4 LINE L1 0 6636 6145 6 1310 361 306 0 87 chr15 95034875 95035036 -8459938 - Cheshire DNA MER1_type -1191 1229 1083 6 1310 237 33 0 0 chr15 95035251 95035281 -8459693 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 6 1310 349 252 195 39 chr15 95035287 95035415 -8459559 + RSINE1 SINE B4 10 157 -8 6 1310 246 296 173 0 chr15 95035419 95035581 -8459393 - Cheshire DNA MER1_type -1545 875 686 6 1310 208 158 35 0 chr15 95035581 95035638 -8459336 + CT-rich Low_complexity Low_complexity 2 60 0 6 1310 504 296 82 27 chr15 95036036 95036220 -8458754 - ID_B1 SINE B4 -30 194 1 6 1310 2275 132 8 20 chr15 95036294 95036696 -8458278 - MTB_Mm LTR MaLR 0 407 11 7 1310 255 296 190 0 chr15 95036704 95036846 -8458128 - Cheshire DNA MER1_type -1859 561 393 6 1310 230 317 24 0 chr15 95037020 95037102 -8457872 - Cheshire DNA MER1_type -2315 105 22 6 1310 678 58 0 0 chr15 95037144 95037231 -8457743 + (TG)n Simple_repeat Simple_repeat 2 88 0 7 1310 618 259 27 85 chr15 95037934 95038158 -8456816 + B4 SINE B4 3 213 -79 7 1310 383 210 10 0 chr15 95038165 95038265 -8456709 + GA-rich Low_complexity Low_complexity 1 101 0 7 1310 1060 81 12 0 chr15 95038314 95038475 -8456499 + (CA)n Simple_repeat Simple_repeat 2 164 0 7 1310 450 0 0 0 chr15 95038475 95038524 -8456450 + (GA)n Simple_repeat Simple_repeat 2 51 0 7 1310 563 290 39 20 chr15 95038674 95038878 -8456096 + ID_B1 SINE B4 1 208 -16 7 1310 226 372 43 30 chr15 95038913 95039143 -8455831 + MLT1J-int LTR MaLR 126 358 -1029 7 1310 351 339 51 34 chr15 95039283 95039460 -8455514 + B3A SINE B2 1 180 -18 7 1310 387 58 0 0 chr15 95039475 95039518 -8455456 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 1310 438 20 0 0 chr15 95039518 95039569 -8455405 + (TG)n Simple_repeat Simple_repeat 2 52 0 8 1310 387 58 0 0 chr15 95039569 95039577 -8455397 + (TA)n Simple_repeat Simple_repeat 1 8 0 8 1310 379 123 0 58 chr15 95040132 95040201 -8454773 + Lx3C LINE L1 6631 6695 -281 8 1310 270 0 0 0 chr15 95040244 95040274 -8454700 + (TAA)n Simple_repeat Simple_repeat 2 31 0 8 1310 1989 102 158 6 chr15 95041259 95041614 -8453360 - MusHAL1 LINE L1 -300 2412 2004 8 1310 7760 82 17 6 chr15 95041611 95042835 -8452139 + L1_Mus3 LINE L1 5404 6638 0 8 1310 211 306 48 0 chr15 95043239 95043301 -8451673 + RSINE1 SINE B4 53 117 -48 8 1310 431 308 68 104 chr15 95044261 95044616 -8450358 - ORR1E LTR MaLR 0 359 18 8 1310 22 0 0 0 chr15 95044659 95044681 -8450293 + AT_rich Low_complexity Low_complexity 1 22 0 8 1310 351 0 0 0 chr15 95044782 95044821 -8450153 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1310 186 43 0 0 chr15 95045070 95045093 -8449881 + (TC)n Simple_repeat Simple_repeat 2 24 0 9 1310 189 74 0 0 chr15 95045537 95045564 -8449410 + (TC)n Simple_repeat Simple_repeat 1 27 0 9 1310 2088 178 93 2 chr15 95045734 95046144 -8448830 - Lx LINE L1 -13 6641 6195 9 1310 23 0 0 0 chr15 95046506 95046529 -8448445 + AT_rich Low_complexity Low_complexity 1 23 0 9 1310 2268 84 55 0 chr15 95048071 95048381 -8446593 - ORR1A2 LTR MaLR 0 327 1 9 1310 306 0 0 0 chr15 95048504 95048538 -8446436 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 1310 500 336 117 52 chr15 95049245 95049672 -8445302 - LTR33 LTR ERVL -7 508 54 9 1310 207 0 0 0 chr15 95050453 95050476 -8444498 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 9 1310 258 273 25 76 chr15 95051079 95051198 -8443776 + B1F SINE Alu 5 117 -32 9 1310 369 264 0 62 chr15 95051098 95051211 -8443763 + ID_B1 SINE B4 103 208 -16 9 1310 429 129 0 0 chr15 95051237 95051307 -8443667 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1310 233 301 132 9 chr15 95052026 95052140 -8442834 - MIRb SINE MIR -119 149 22 1 1310 311 237 0 3 chr15 95053547 95053624 -8441350 + B1_Mus2 SINE Alu 1 76 -44 1 1310 259 264 92 8 chr15 95053624 95053754 -8441220 + L1MEf LINE L1 882 1022 -5178 1 1310 699 90 0 0 chr15 95053876 95053976 -8440998 + (CA)n Simple_repeat Simple_repeat 1 100 0 1 1310 643 287 97 80 chr15 95053978 95054443 -8440531 + L1MEf LINE L1 1252 1724 -4476 1 1310 352 317 95 14 chr15 95054669 95054816 -8440158 - RSINE1 SINE B4 -5 160 2 1 1310 234 82 60 52 chr15 95055065 95055181 -8439793 + (TCTA)n Simple_repeat Simple_repeat 1 117 0 1 1310 336 48 0 0 chr15 95055183 95055225 -8439749 + (TCTG)n Simple_repeat Simple_repeat 2 43 0 1 1310 498 289 75 47 chr15 95056514 95056728 -8438246 + B4A SINE B4 2 221 -71 1 1310 477 293 94 25 chr15 95057332 95057535 -8437439 + ID_B1 SINE B4 4 220 -4 1 1310 326 279 39 0 chr15 95057552 95057656 -8437318 + MER3 DNA MER1_type 49 156 -53 1 1310 285 310 57 23 chr15 95060891 95061155 -8433819 - B4A SINE B4 -18 274 2 1 1310 1105 176 19 5 chr15 95061390 95061596 -8433378 - URR1A DNA MER1_type -13 213 5 1 1310 426 152 48 0 chr15 95061954 95062079 -8432895 + (TA)n Simple_repeat Simple_repeat 2 132 0 1 1310 503 290 39 108 chr15 95062472 95062859 -8432115 + L1ME1 LINE L1 5764 6123 -56 1 1310 288 130 0 0 chr15 95064718 95064764 -8430210 + (TAA)n Simple_repeat Simple_repeat 2 47 0 1 1310 182 262 33 0 chr15 95065429 95065490 -8429484 + L2 LINE L2 2014 2076 -1343 1 1310 210 268 78 39 chr15 95065998 95066126 -8428848 - MIR SINE MIR -123 139 7 1 1310 267 190 0 0 chr15 95066628 95066686 -8428288 + CT-rich Low_complexity Low_complexity 1 58 0 1 1310 186 43 0 0 chr15 95067385 95067408 -8427566 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1 1310 878 75 0 131 chr15 95067437 95067590 -8427384 - L1_Mus2 LINE L1 -1 6565 6433 1 1310 3049 79 4 2 chr15 95067590 95067999 -8426975 + L1_Mus2 LINE L1 6042 6841 -167 1 1310 1128 263 67 32 chr15 95068413 95068755 -8426219 - MTE2b LTR MaLR -7 372 19 1 1310 213 274 119 28 chr15 95068824 95068933 -8426041 - L2a LINE L2 -30 3396 3278 1 1310 305 324 115 18 chr15 95069211 95069428 -8425546 - L2a LINE L2 -550 2869 2632 1 1310 182 62 0 30 chr15 95070287 95070320 -8424654 + (CACCC)n Simple_repeat Simple_repeat 3 34 0 1 1310 2285 107 0 60 chr15 95070427 95070774 -8424200 + ORR1A2 LTR MaLR 1 326 -1 1 1310 332 285 146 76 chr15 95070839 95071010 -8423964 - B3A SINE B2 -14 184 2 1 1310 451 314 85 18 chr15 95072494 95072718 -8422256 + MLT1I LTR MaLR 139 377 -34 1 1310 251 250 33 0 chr15 95072900 95072960 -8422014 + GA-rich Low_complexity Low_complexity 3 64 0 1 1310 352 304 35 9 chr15 95073761 95073874 -8421100 - PB1D10 SINE Alu -1 116 1 1 1310 296 311 65 32 chr15 95073874 95073912 -8421062 - ID SINE ID -142 82 41 1 1310 282 356 43 6 chr15 95076021 95076185 -8418789 - L1M3 LINE L1 -573 5595 5426 1 1310 1780 180 134 10 chr15 95078268 95078672 -8416302 - Lx9 LINE L1 -638 7006 6553 1 1310 374 243 73 18 chr15 95080550 95080659 -8414315 + PB1D10 SINE Alu 3 117 0 1 1310 207 288 75 17 chr15 95081366 95081449 -8413525 - MIR SINE MIR -97 165 76 1 1310 1947 138 3 71 chr15 95081449 95081799 -8413175 - ORR1A3 LTR MaLR 0 326 1 1 1310 207 288 75 17 chr15 95081799 95081835 -8413139 - MIR SINE MIR -187 75 40 1 1310 225 198 37 12 chr15 95083169 95083251 -8411723 + (TA)n Simple_repeat Simple_repeat 2 85 0 1 1310 432 0 0 0 chr15 95084461 95084509 -8410465 + (TAAAA)n Simple_repeat Simple_repeat 2 49 0 1 1310 3311 236 48 13 chr15 95084531 95085390 -8409584 + RMER1A Other Other 272 1028 -2 1 1310 373 287 32 8 chr15 95086268 95086391 -8408583 + MLT1A1 LTR MaLR 19 144 -264 1 1310 218 257 80 35 chr15 95086420 95086533 -8408441 + PB1D7 SINE Alu 2 119 -1 1 1310 235 253 12 12 chr15 95086562 95086603 -8408371 + polypurine Low_complexity Low_complexity 2 43 0 1 1310 333 0 0 0 chr15 95086603 95086640 -8408334 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1310 235 253 12 12 chr15 95086640 95086678 -8408296 + polypurine Low_complexity Low_complexity 44 81 0 1 1310 397 240 123 8 chr15 95086777 95086899 -8408075 + RSINE1 SINE B4 1 136 -29 1 1310 279 0 0 0 chr15 95087035 95087066 -8407908 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1310 378 0 0 0 chr15 95087066 95087107 -8407867 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 1310 357 272 132 69 chr15 95087108 95087259 -8407715 + B3A SINE B2 4 168 -30 1 1310 402 57 0 0 chr15 95087259 95087312 -8407662 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1310 378 0 0 0 chr15 95087312 95087353 -8407621 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1310 256 272 132 69 chr15 95087353 95087374 -8407600 + B2_Mm2 SINE B2 165 187 -8 1 1310 247 257 60 67 chr15 95087375 95087525 -8407449 + L1M2 LINE L1 5599 5747 -565 1 1310 294 263 60 10 chr15 95087598 95087698 -8407276 + B3A SINE B2 5 109 -89 1 1310 234 308 0 0 chr15 95088265 95088317 -8406657 + B1F1 SINE Alu 1 52 -97 1 1310 396 0 0 0 chr15 95089632 95089676 -8405298 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1310 622 321 35 35 chr15 95089773 95090005 -8404969 + B4A SINE B4 39 270 -22 1 1310 327 78 0 0 chr15 95090005 95090056 -8404918 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1310 222 37 0 0 chr15 95090060 95090087 -8404887 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1310 375 23 0 0 chr15 95090436 95090480 -8404494 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1310 934 232 31 9 chr15 95090518 95090740 -8404234 + MTE2b LTR MaLR 1 227 -152 1 1310 783 145 164 0 chr15 95091987 95092146 -8402828 + URR1A DNA MER1_type 5 189 -37 1 1310 540 344 50 98 chr15 95092825 95093302 -8401672 + Lx8 LINE L1 7012 7465 -8 1 1310 370 268 86 8 chr15 95093805 95093933 -8401041 - Tigger14a DNA MER2_type -111 213 76 1 1310 221 0 35 0 chr15 95094112 95094141 -8400833 + (TTATA)n Simple_repeat Simple_repeat 3 32 0 1 1310 288 0 0 0 chr15 95094141 95094173 -8400801 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1310 276 289 41 10 chr15 95094184 95094282 -8400692 - RSINE1 SINE B4 -31 134 34 1 1310 229 182 0 0 chr15 95094417 95094461 -8400513 - B3A SINE B2 -154 44 1 1 1310 446 223 8 0 chr15 95095809 95095930 -8399044 + (TA)n Simple_repeat Simple_repeat 2 123 0 1 1310 261 0 0 0 chr15 95097629 95097658 -8397316 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 1310 232 306 0 27 chr15 95098503 95098577 -8396397 - ID4_ SINE ID 0 83 12 1 1310 615 259 14 0 chr15 95098616 95098759 -8396215 + B1_Mur1 SINE Alu 3 147 -2 1 1310 1058 67 0 48 chr15 95098759 95098948 -8396026 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 1 1310 785 117 5 58 chr15 95098982 95099013 -8395961 + polypurine Low_complexity Low_complexity 1 32 0 1 1310 1228 0 53 0 chr15 95099013 95099335 -8395639 + (GGGAA)n Simple_repeat Simple_repeat 1 339 0 1 1310 785 117 5 58 chr15 95099335 95099357 -8395617 + polypurine Low_complexity Low_complexity 33 53 0 1 1310 198 0 0 0 chr15 95099357 95099379 -8395595 + (GGAAA)n Simple_repeat Simple_repeat 4 25 0 1 1310 785 117 5 58 chr15 95099379 95099513 -8395461 + polypurine Low_complexity Low_complexity 54 178 0 1 1310 336 83 0 0 chr15 95099603 95099651 -8395323 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1310 216 0 0 0 chr15 95100299 95100323 -8394651 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1310 219 78 78 0 chr15 95100334 95100385 -8394589 + (CAAAC)n Simple_repeat Simple_repeat 5 59 0 1 1310 405 14 81 0 chr15 95101247 95101321 -8393653 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 1310 186 43 0 0 chr15 95101396 95101419 -8393555 + (CTA)n Simple_repeat Simple_repeat 1 23 0 1 1310 544 297 65 5 chr15 95101426 95101612 -8393362 - B3 SINE B2 -17 199 3 1 1310 193 274 13 40 chr15 95102154 95102230 -8392744 + L2a LINE L2 3248 3321 -105 1 1310 3510 184 57 34 chr15 95102824 95103566 -8391408 + Lx5 LINE L1 6290 7048 -2 1 1310 194 350 48 0 chr15 95103857 95103960 -8391014 + L2a LINE L2 2973 3080 -346 1 1310 210 139 0 0 chr15 95104432 95104468 -8390506 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 1310 337 153 14 14 chr15 95104808 95104881 -8390093 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 1310 1008 81 0 45 chr15 95104900 95105056 -8389918 - L1_Mus2 LINE L1 -1 6565 6417 1 1310 199 203 13 13 chr15 95105106 95105181 -8389793 + (TA)n Simple_repeat Simple_repeat 2 76 0 1 1310 299 243 14 0 chr15 95105272 95105342 -8389632 - ID4_ SINE ID -11 72 2 1 1310 260 290 0 41 chr15 95107659 95107756 -8387218 - Lx6 LINE L1 -26 7434 7342 1 1310 228 280 64 18 chr15 95111643 95111752 -8383222 + L1MC LINE L1 5647 5760 -2122 1 1310 396 218 6 11 chr15 95111774 95111955 -8383019 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 1 1310 224 279 16 0 chr15 95113703 95113764 -8381210 + (TATATG)n Simple_repeat Simple_repeat 1 62 0 1 1310 1088 74 18 7 chr15 95113771 95114234 -8380740 + (TAGA)n Simple_repeat Simple_repeat 1 468 0 1 1310 7797 66 4 0 chr15 95114438 95115553 -8379421 + L1_Mus2 LINE L1 5448 6566 0 1 1310 242 321 89 41 chr15 95115620 95115766 -8379208 - MIRb SINE MIR -17 251 99 1 1310 455 247 66 2 chr15 95117636 95117820 -8377154 + L1MA4 LINE L1 6054 6269 -31 1 1310 258 296 63 74 chr15 95117861 95118036 -8376938 + MIRb SINE MIR 22 194 -74 1 1310 2285 148 21 37 chr15 95118095 95118531 -8376443 + Lx4B LINE L1 6623 7051 -7 1 1310 483 63 0 0 chr15 95119013 95119076 -8375898 + (TAA)n Simple_repeat Simple_repeat 3 65 0 2 1310 761 286 51 54 chr15 95120690 95121004 -8373970 + Lx7 LINE L1 7000 7312 -384 2 1310 409 343 22 0 chr15 95121493 95121630 -8373344 - B1F1 SINE Alu -4 145 6 2 1310 193 384 0 0 chr15 95122188 95122261 -8372713 - MIRm SINE MIR -177 99 27 2 1310 455 202 9 0 chr15 95122303 95122412 -8372562 + (CATAA)n Simple_repeat Simple_repeat 2 111 0 2 1310 459 0 0 0 chr15 95125187 95125238 -8369736 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 2 1310 180 0 0 0 chr15 95128920 95128940 -8366034 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 2 1310 202 314 86 0 chr15 95130040 95130145 -8364829 - MIRc SINE MIR -67 201 88 2 1310 330 26 0 0 chr15 95131565 95131604 -8363370 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2 1310 614 229 47 70 chr15 95132284 95132542 -8362432 - Lx7 LINE L1 -1 7695 7444 2 1310 279 48 0 0 chr15 95132572 95132614 -8362360 + B1_Mur4 SINE Alu 109 150 0 2 1310 284 81 0 75 chr15 95132629 95132676 -8362298 + A-rich Low_complexity Low_complexity 4 47 0 2 1310 1188 35 0 7 chr15 95132676 95132820 -8362154 + B1_Mus1 SINE Alu 5 147 -1 2 1310 284 81 0 75 chr15 95132820 95132852 -8362122 + A-rich Low_complexity Low_complexity 48 76 0 2 1310 542 216 0 25 chr15 95133027 95133146 -8361828 + PB1D10 SINE Alu 2 117 0 2 1310 251 304 43 0 chr15 95133182 95133251 -8361723 + B1F SINE Alu 9 80 -69 2 1310 379 173 43 14 chr15 95135096 95135237 -8359737 + (TA)n Simple_repeat Simple_repeat 2 146 0 2 1310 3835 9 121 0 chr15 95136407 95136847 -8358127 - MT2_Mm LTR ERVL 0 493 1 2 1310 321 0 0 0 chr15 95136847 95136885 -8358089 - MERVL-int LTR ERVL 0 5485 5448 2 1310 324 157 58 46 chr15 95136885 95136972 -8358002 - ORR1A3-int LTR MaLR -1323 640 553 2 1310 48655 18 0 0 chr15 95136976 95142331 -8352643 - MERVL-int LTR ERVL -130 5355 1 2 1310 3846 9 121 0 chr15 95142331 95142771 -8352203 - MT2_Mm LTR ERVL 0 493 1 2 1310 273 370 30 0 chr15 95144319 95144419 -8350555 - MIRc SINE MIR -129 139 37 2 1310 246 174 0 0 chr15 95145205 95145251 -8349723 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 2 1310 316 169 50 75 chr15 95146468 95146572 -8348402 - RMER19B LTR ERVK -6 896 806 2 1310 611 265 101 89 chr15 95148613 95148961 -8346013 + ORR1E LTR MaLR 8 359 0 2 1310 276 30 0 0 chr15 95149022 95149055 -8345919 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1310 210 71 0 0 chr15 95149192 95149220 -8345754 + (CCCCCA)n Simple_repeat Simple_repeat 2 29 0 2 1310 288 0 0 0 chr15 95150841 95150873 -8344101 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1310 325 321 14 21 chr15 95150886 95151029 -8343945 - Lx9 LINE L1 -172 7472 7331 2 1310 563 81 0 11 chr15 95151097 95151184 -8343790 + (TA)n Simple_repeat Simple_repeat 1 86 0 2 1310 243 0 0 0 chr15 95151297 95151324 -8343650 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1310 2376 318 79 19 chr15 95151324 95152253 -8342721 + Lx9 LINE L1 6349 7332 -312 2 1310 287 309 19 9 chr15 95152522 95152630 -8342344 + RSINE1 SINE B4 4 112 -53 2 1310 978 119 11 22 chr15 95152641 95152821 -8342153 + CT-rich Low_complexity Low_complexity 3 180 0 2 1310 197 33 33 0 chr15 95152826 95152856 -8342118 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1310 241 336 58 0 chr15 95153065 95153169 -8341805 + PB1D9 SINE Alu 3 112 -8 2 1310 328 160 160 0 chr15 95153942 95154017 -8340957 - URR1B DNA MER1_type -56 169 83 2 163 681 116 16 47 chr15 95158217 95158344 -8336630 + ORR1C2 LTR MaLR 63 185 -199 2 1311 465 138 0 0 chr15 95158344 95158424 -8336550 + (TC)n Simple_repeat Simple_repeat 1 80 0 2 1311 876 155 52 37 chr15 95158425 95158653 -8336321 + ORR1C2 LTR MaLR 188 394 0 2 1311 189 107 0 0 chr15 95158803 95158831 -8336143 + (TTCTCC)n Simple_repeat Simple_repeat 6 33 0 2 1311 742 149 13 90 chr15 95158839 95158994 -8335980 - B1_Mur1 SINE Alu 0 149 7 2 1311 343 167 0 0 chr15 95159229 95159283 -8335691 + B1_Mus1 SINE Alu 11 64 -84 2 1311 501 307 55 36 chr15 95160041 95160315 -8334659 - B4 SINE B4 -13 279 1 2 1311 433 290 98 49 chr15 95161424 95161794 -8333180 - MLT1E2 LTR MaLR -38 467 52 2 1311 1082 64 6 0 chr15 95162179 95162335 -8332639 + (TGGA)n Simple_repeat Simple_repeat 4 160 0 2 1311 510 311 44 22 chr15 95162965 95163192 -8331782 - Lx7 LINE L1 -290 7406 7175 2 1311 1957 163 15 12 chr15 95163199 95163528 -8331446 + Lx4A LINE L1 6678 7007 -51 2 1311 238 183 233 0 chr15 95163634 95163694 -8331280 + RLTR20D LTR ERVK 3 76 -458 2 1311 475 195 66 44 chr15 95163691 95163881 -8331093 + RLTR20D LTR ERVK 195 430 -104 2 1311 315 0 0 0 chr15 95163881 95163916 -8331058 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1311 286 261 179 48 chr15 95163916 95163995 -8330979 + RLTR20D LTR ERVK 431 533 -1 2 1311 611 316 133 23 chr15 95164251 95164598 -8330376 + MLT1F2 LTR MaLR 45 429 -131 2 1311 296 48 24 0 chr15 95164804 95164846 -8330128 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 2 1311 405 227 17 17 chr15 95165867 95166042 -8328932 + (TG)n Simple_repeat Simple_repeat 1 175 0 2 1311 483 63 0 0 chr15 95166054 95166117 -8328857 + (TA)n Simple_repeat Simple_repeat 2 64 0 2 1311 380 284 21 54 chr15 95166148 95166334 -8328640 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1311 382 304 0 10 chr15 95166474 95166577 -8328397 - B4A SINE B4 -176 116 15 2 1311 853 224 73 0 chr15 95167958 95168137 -8326837 + B3 SINE B2 1 192 -24 2 1311 2787 136 19 15 chr15 95168507 95168985 -8325989 - Lx2B LINE L1 -548 6452 5973 2 1311 2567 204 26 11 chr15 95168988 95169528 -8325446 + Lx2B LINE L1 6453 7000 0 2 1311 288 339 0 25 chr15 95170138 95170256 -8324718 + CT-rich Low_complexity Low_complexity 1 115 0 2 1311 7617 70 7 1 chr15 95173546 95174526 -8320448 + L1_Mus3 LINE L1 5650 6635 -3 2 1311 650 352 100 35 chr15 95174579 95174979 -8319995 + RMER15-int LTR ERVL 94 519 -4480 2 1311 1539 224 20 14 chr15 95175196 95175544 -8319430 + Lx9 LINE L1 6370 6719 -925 2 1311 899 318 64 44 chr15 95175699 95176196 -8318778 + RMER15-int LTR ERVL 4187 4693 -306 2 1311 317 354 61 33 chr15 95176797 95177010 -8317964 + RMER15 LTR ERVL 353 571 -4 2 1311 359 305 39 15 chr15 95178072 95178202 -8316772 + B4A SINE B4 2 134 -158 2 1311 422 204 211 70 chr15 95178202 95178429 -8316545 + L1MA6 LINE L1 5881 6139 -161 2 1311 22 56 0 0 chr15 95178495 95178531 -8316443 + AT_rich Low_complexity Low_complexity 1 36 0 2 1311 488 304 46 25 chr15 95178634 95178830 -8316144 + L1_Rod LINE L1 507 706 -6902 2 1311 197 159 23 0 chr15 95178895 95178939 -8316035 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1311 321 26 0 0 chr15 95178941 95178979 -8315995 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1311 5485 243 51 48 chr15 95178989 95180675 -8314299 + L1_Rod LINE L1 755 2458 -3389 2 1311 7083 28 2 6 chr15 95180675 95181504 -8313470 - L1Md_F2 LINE L1 0 6582 5757 2 1311 5485 241 46 39 chr15 95181504 95181997 -8312977 + L1_Rod LINE L1 2459 2940 -2907 2 1311 1919 253 9 77 chr15 95181994 95182563 -8312411 + Lx9 LINE L1 6925 7454 -190 2 1311 616 261 55 65 chr15 95183950 95184241 -8310733 + B4 SINE B4 2 289 -3 2 1311 468 0 0 0 chr15 95184289 95184341 -8310633 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 1311 189 357 0 28 chr15 95184585 95184657 -8310317 - L2b LINE L2 0 3375 3306 2 1311 186 71 0 0 chr15 95186196 95186224 -8308750 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 1311 4317 70 2 0 chr15 95186487 95187027 -8307947 + L1_Mus1 LINE L1 6027 6567 0 2 1311 201 182 0 0 chr15 95187045 95187078 -8307896 + A-rich Low_complexity Low_complexity 1 33 0 2 1311 522 0 0 0 chr15 95187148 95187206 -8307768 + (GA)n Simple_repeat Simple_repeat 2 59 0 2 1311 316 149 40 0 chr15 95188386 95188460 -8306514 + (TATATG)n Simple_repeat Simple_repeat 4 80 0 2 1311 234 150 0 0 chr15 95188599 95188639 -8306335 + (TAA)n Simple_repeat Simple_repeat 3 42 0 2 1311 1547 224 70 23 chr15 95188981 95189379 -8305595 - MTD LTR MaLR 0 419 3 2 1311 1808 247 27 98 chr15 95189945 95190601 -8304373 + RMER19C LTR ERVK 2 611 0 2 1311 346 247 19 14 chr15 95193773 95193896 -8301078 + Lx8 LINE L1 5741 5893 -1580 2 1311 471 281 31 46 chr15 95194136 95194330 -8300644 + MER20 DNA MER1_type 1 191 -28 2 1311 338 323 10 0 chr15 95194849 95194945 -8300029 - MER5A1 DNA MER1_type -29 137 41 2 1311 1265 185 4 4 chr15 95195213 95195452 -8299522 + RLTR42 LTR ERVK 1 239 0 2 1311 1495 199 68 6 chr15 95196344 95196682 -8298292 + ORR1B2 LTR MaLR 1 359 -8 2 1311 264 322 18 73 chr15 95196764 95196928 -8298046 + MLT2B4 LTR ERVL 353 507 -49 2 1311 459 0 0 0 chr15 95196972 95197023 -8297951 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 1311 275 204 43 21 chr15 95197413 95197553 -8297421 + GA-rich Low_complexity Low_complexity 2 144 0 2 1311 207 163 23 0 chr15 95197795 95197817 -8297157 + polypurine Low_complexity Low_complexity 3 25 0 2 1311 579 66 0 0 chr15 95197817 95197893 -8297081 + (GA)n Simple_repeat Simple_repeat 1 76 0 2 1311 207 163 23 0 chr15 95197893 95197913 -8297061 + polypurine Low_complexity Low_complexity 26 45 0 2 1311 185 325 32 73 chr15 95197913 95198036 -8296938 + MIRb SINE MIR 1 118 -150 2 1311 236 283 0 131 chr15 95198265 95198395 -8296579 + Lx8 LINE L1 7218 7330 -143 2 1311 28 0 0 0 chr15 95198401 95198429 -8296545 + AT_rich Low_complexity Low_complexity 1 28 0 2 1311 446 49 16 0 chr15 95198593 95198654 -8296320 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 1311 1272 257 13 11 chr15 95199273 95199604 -8295370 + MTD LTR MaLR 12 342 -58 2 1311 280 217 29 0 chr15 95199643 95199712 -8295262 + MTD LTR MaLR 345 415 -4 2 1311 1379 227 76 74 chr15 95200933 95201404 -8293570 - RLTR28B LTR ERVL -6 475 4 2 1311 373 300 43 27 chr15 95201405 95201590 -8293384 + ORR1E LTR MaLR 50 237 -122 2 1311 447 162 0 0 chr15 95202441 95202521 -8292453 + (TG)n Simple_repeat Simple_repeat 1 80 0 2 1311 546 265 6 50 chr15 95202574 95202753 -8292221 + ID_B1 SINE B4 49 219 -5 2 1311 201 381 45 23 chr15 95203014 95203280 -8291694 + L2a LINE L2 2477 2748 -671 2 1311 203 321 51 44 chr15 95203733 95203870 -8291104 + L2a LINE L2 3289 3426 0 2 1311 530 170 20 88 chr15 95205369 95205517 -8289457 - Lx7 LINE L1 0 7696 7559 2 1311 411 21 0 0 chr15 95205531 95205579 -8289395 + (GGAA)n Simple_repeat Simple_repeat 2 49 0 3 1311 226 259 0 94 chr15 95205585 95205649 -8289325 + B1_Mur4 SINE Alu 3 60 -90 3 1311 395 0 0 163 chr15 95205653 95206084 -8288890 + (CAGAG)n Simple_repeat Simple_repeat 1 360 0 3 1311 531 154 9 88 chr15 95206111 95206225 -8288749 + B1_Mus2 SINE Alu 42 146 -1 3 1311 540 0 0 0 chr15 95206450 95206510 -8288464 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1311 314 291 26 0 chr15 95206583 95206700 -8288274 - Lx8 LINE L1 -274 7199 7080 3 1311 240 291 105 0 chr15 95208813 95208899 -8286075 + MLT1K LTR MaLR 175 269 -326 3 1311 1679 149 81 21 chr15 95209107 95209442 -8285532 + ORR1B1 LTR MaLR 40 394 0 3 1311 220 326 56 11 chr15 95210424 95210514 -8284460 + PB1D10 SINE Alu 9 102 -15 3 1311 588 298 88 78 chr15 95210952 95211338 -8283636 - MTD LTR MaLR -12 407 18 3 1311 333 287 52 44 chr15 95211380 95211515 -8283459 + MLT1H1 LTR MaLR 78 213 -382 3 1311 390 367 47 14 chr15 95211568 95211847 -8283127 + MLT1H1 LTR MaLR 261 548 -7 3 1311 496 308 6 30 chr15 95212279 95212443 -8282531 + RSINE1 SINE B4 4 163 -2 3 1311 240 74 69 19 chr15 95212583 95212644 -8282330 - Lx2 LINE L1 -2 6998 6942 3 1311 215 217 56 78 chr15 95212836 95212926 -8282048 - L2c LINE L2 -46 3341 3254 3 1311 201 250 31 62 chr15 95213013 95213077 -8281897 - L3 LINE CR1 -125 4364 4303 3 1311 890 332 29 27 chr15 95213567 95214047 -8280927 - L1MA5 LINE L1 0 6300 5820 3 1311 1483 184 21 14 chr15 95214516 95214797 -8280177 - Lx LINE L1 -167 6487 6205 3 1311 2735 216 104 81 chr15 95216145 95216866 -8278108 + Lx7 LINE L1 6804 7531 -165 3 1311 228 67 0 0 chr15 95216866 95216896 -8278078 + (TTATA)n Simple_repeat Simple_repeat 2 31 0 3 1311 2735 216 104 81 chr15 95216896 95217047 -8277927 + Lx7 LINE L1 7532 7696 0 3 1311 2873 218 115 13 chr15 95221278 95221519 -8273455 + Lx9 LINE L1 6771 7045 -599 3 1311 954 131 0 0 chr15 95221519 95221672 -8273302 + Lx LINE L1 6497 6649 -5 3 1311 2873 218 115 13 chr15 95221672 95222223 -8272751 + Lx9 LINE L1 7046 7644 0 3 1311 474 252 23 86 chr15 95223476 95223650 -8271324 + RSINE1 SINE B4 3 165 0 3 1311 24 32 0 0 chr15 95223712 95223743 -8271231 + AT_rich Low_complexity Low_complexity 1 31 0 3 1311 1014 241 14 0 chr15 95223761 95223973 -8271001 - B3 SINE B2 -1 215 1 3 1311 1577 277 101 48 chr15 95224579 95225221 -8269753 + Lx8 LINE L1 6598 7273 -200 3 1311 204 40 0 0 chr15 95226123 95226148 -8268826 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1311 229 211 39 0 chr15 95226168 95226220 -8268754 - L1MA5 LINE L1 -53 6247 6194 3 1311 581 255 108 25 chr15 95226350 95226591 -8268383 - L1MA5 LINE L1 -315 5985 5725 3 1311 4246 274 81 110 chr15 95226649 95230085 -8264889 - Lx7 LINE L1 -1507 6189 2936 3 1311 389 270 99 87 chr15 95230581 95230856 -8264118 + L1MB1 LINE L1 5643 5920 -269 3 1311 1114 214 121 26 chr15 95230871 95231124 -8263850 - ORR1D1 LTR MaLR -9 365 79 3 1311 1914 157 49 37 chr15 95231124 95231449 -8263525 + ORR1A4 LTR MaLR 1 329 0 3 1311 1114 214 121 26 chr15 95231449 95231502 -8263472 - ORR1D1 LTR MaLR -296 78 30 3 1311 7347 114 7 3 chr15 95231525 95232987 -8261987 + L1_Mus4 LINE L1 5161 6630 -6 3 1311 710 187 0 7 chr15 95233002 95233153 -8261821 + GA-rich Low_complexity Low_complexity 3 152 0 3 1311 21199 113 126 6 chr15 95233228 95234704 -8260270 + Lx3A LINE L1 34 1709 -4177 3 1311 8280 41 22 12 chr15 95234704 95235676 -8259298 + L1Md_F2 LINE L1 5602 6582 0 3 1311 21199 84 20 10 chr15 95235676 95238263 -8256711 + Lx3A LINE L1 1710 4326 -1560 3 1311 1156 137 62 19 chr15 95238265 95238474 -8256500 + Lx LINE L1 6437 6654 0 3 1311 8743 94 39 12 chr15 95238474 95240101 -8254873 + Lx3A LINE L1 5297 6957 -24 3 1311 342 0 0 0 chr15 95240115 95240153 -8254821 + (TAA)n Simple_repeat Simple_repeat 2 39 0 3 1311 28 0 0 0 chr15 95241970 95241998 -8252976 + AT_rich Low_complexity Low_complexity 1 28 0 3 1311 246 62 0 0 chr15 95242300 95242332 -8252642 + (CAG)n Simple_repeat Simple_repeat 1 32 0 3 1311 204 40 0 0 chr15 95243471 95243496 -8251478 + (TATG)n Simple_repeat Simple_repeat 3 27 0 3 1311 541 259 14 22 chr15 95243851 95243989 -8250985 + MT2A LTR ERVL 1 137 -396 3 1311 1012 255 70 57 chr15 95244006 95244322 -8250652 + MT2A LTR ERVL 207 526 -7 3 1311 351 0 0 0 chr15 95244607 95244646 -8250328 + (TATG)n Simple_repeat Simple_repeat 1 39 0 3 1311 523 156 61 30 chr15 95247347 95247459 -8247515 - Lx9 LINE L1 -7 7637 7519 3 1311 204 40 0 0 chr15 95247459 95247484 -8247490 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1311 661 193 44 7 chr15 95247484 95247620 -8247354 - Lx9 LINE L1 -168 7476 7336 3 1311 1206 212 239 13 chr15 95247629 95247930 -8247044 + ORR1D1 LTR MaLR 5 373 -1 3 1311 1142 238 116 9 chr15 95247932 95248259 -8246715 + Lx9 LINE L1 6978 7339 -305 3 1311 2712 168 7 2 chr15 95248367 95248786 -8246188 + MTC LTR MaLR 1 421 0 3 1311 244 250 83 60 chr15 95249785 95250002 -8244972 + L1_Mm LINE L1 1462 1683 -4200 3 1311 2614 108 14 6 chr15 95250040 95250402 -8244572 + RLTR9A LTR ERVK 1 365 -3 3 1311 316 283 102 15 chr15 95250418 95250651 -8244323 + L1MEg LINE L1 2152 2340 -4604 3 1311 797 212 162 0 chr15 95251685 95251864 -8243110 + B3 SINE B2 7 214 -2 3 1311 246 275 29 0 chr15 95252029 95252098 -8242876 + L2 LINE L2 2607 2677 -742 3 1311 540 45 0 0 chr15 95253677 95253744 -8241230 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 3 1311 1929 82 10 17 chr15 95253746 95254045 -8240929 - Lx3_Mus LINE L1 -683 6326 6030 3 1311 4861 86 14 12 chr15 95254059 95254699 -8240275 + Lx3_Mus LINE L1 6351 6991 -18 3 1311 492 251 79 34 chr15 95254744 95254921 -8240053 + B2_Mm2 SINE B2 7 191 -4 3 1311 450 252 71 0 chr15 95256673 95256800 -8238174 + MER5A1 DNA MER1_type 31 166 0 3 1311 306 67 0 0 chr15 95259839 95259884 -8235090 + (TTTTG)n Simple_repeat Simple_repeat 5 49 0 3 1311 231 231 0 0 chr15 95261011 95261063 -8233911 - RLTR22_Mur LTR ERVK -487 1361 1310 3 1311 552 134 0 0 chr15 95261114 95261211 -8233763 + (TC)n Simple_repeat Simple_repeat 2 98 0 3 1311 360 0 0 0 chr15 95261211 95261251 -8233723 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1311 211 265 0 0 chr15 95266114 95266163 -8228811 + G-rich Low_complexity Low_complexity 2 50 0 3 1311 195 129 0 0 chr15 95266277 95266308 -8228666 + (TATG)n Simple_repeat Simple_repeat 2 32 0 3 1311 2687 289 65 33 chr15 95266412 95266527 -8228447 + Lx8 LINE L1 6328 6439 -1034 3 1311 2102 175 3 8 chr15 95266527 95266895 -8228079 - Lx LINE L1 0 6654 6289 3 1311 2687 289 65 33 chr15 95266895 95267758 -8227216 + Lx8 LINE L1 6440 7329 -144 3 1311 405 0 0 0 chr15 95267758 95267803 -8227171 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1311 2687 289 65 33 chr15 95267803 95267896 -8227078 + Lx8 LINE L1 7330 7435 -38 3 1311 34 0 0 0 chr15 95267896 95267930 -8227044 + AT_rich Low_complexity Low_complexity 1 34 0 3 1311 499 256 75 6 chr15 95268057 95268230 -8226744 - L1MA6 LINE L1 0 6300 6116 3 1311 428 301 182 4 chr15 95268237 95268484 -8226490 - L1MA6 LINE L1 -504 5787 5497 3 1311 937 68 0 0 chr15 95268578 95268695 -8226279 + B2_Mm2 SINE B2 3 119 -76 3 1311 239 291 45 44 chr15 95269002 95269119 -8225855 + MIRm SINE MIR 35 154 -114 3 1311 499 196 0 0 chr15 95269286 95269383 -8225591 - Lx9 LINE L1 -7 7637 7541 3 1311 199 336 67 30 chr15 95269525 95269660 -8225314 + MIRc SINE MIR 60 199 -69 3 1311 198 259 67 33 chr15 95270245 95270305 -8224669 - L3 LINE CR1 -73 4416 4355 3 1311 2379 191 15 67 chr15 95271295 95271833 -8223141 - RLTR28 LTR ERVL -14 510 1 3 1311 289 288 0 0 chr15 95272623 95272689 -8222285 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 1311 2078 153 68 22 chr15 95272776 95273163 -8221811 - MTC LTR MaLR -19 402 3 3 1311 557 235 8 25 chr15 95273191 95273313 -8221661 + B1_Mur2 SINE Alu 29 148 -1 3 1311 352 211 106 35 chr15 95273340 95273381 -8221593 + RLTR15 LTR ERVK 1 52 -307 3 1311 180 0 0 0 chr15 95273381 95273401 -8221573 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1311 352 211 106 35 chr15 95273401 95273472 -8221502 + RLTR15 LTR ERVK 53 120 -239 3 1311 1595 203 54 18 chr15 95273684 95274165 -8220809 + Lx4B LINE L1 6465 6969 -31 3 1311 182 37 0 36 chr15 95274165 95274193 -8220781 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 3 1311 193 331 52 15 chr15 95274244 95274379 -8220595 - L2 LINE L2 -743 2676 2537 3 1311 487 219 396 24 chr15 95275808 95275972 -8219002 - URR1B DNA MER1_type 0 225 1 3 1311 386 298 169 26 chr15 95276449 95276762 -8218212 - L1M2 LINE L1 -2950 4214 3857 3 1311 35590 54 3 0 chr15 95276801 95281740 -8213234 + L1Md_F3 LINE L1 679 5585 -298 3 1311 8528 38 12 0 chr15 95281743 95282708 -8212266 + L1Md_F3 LINE L1 5589 6565 -19 3 1311 511 277 56 35 chr15 95282714 95282946 -8212028 - L1M2 LINE L1 -3350 3814 3578 3 1311 598 305 57 64 chr15 95283301 95283756 -8211218 - L1M2 LINE L1 -3545 3619 3168 3 1311 1092 306 68 29 chr15 95283868 95284616 -8210358 - L1M2 LINE L1 -4167 3001 2225 3 1311 250 255 64 36 chr15 95284719 95284829 -8210145 - L1M2 LINE L1 -4961 2207 2095 3 1311 453 246 35 69 chr15 95284840 95284984 -8209990 + B1_Mur1 SINE Alu 10 148 -1 3 1311 314 345 102 20 chr15 95285297 95285551 -8209423 + L1MC LINE L1 3661 3935 -2211 3 1311 907 265 57 28 chr15 95285723 95286041 -8208933 + Lx6 LINE L1 7133 7459 -1 3 1311 227 275 55 9 chr15 95286071 95286181 -8208793 + L1MD LINE L1 4215 4329 -1817 3 1311 446 0 0 18 chr15 95286295 95286350 -8208624 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 3 1311 1292 39 0 0 chr15 95286350 95286506 -8208468 - B2_Mm1t SINE B2 -33 160 5 3 1311 201 215 0 30 chr15 95286666 95286733 -8208241 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 3 1311 213 121 0 0 chr15 95286857 95286890 -8208084 + (T)n Simple_repeat Simple_repeat 1 33 0 3 1311 954 269 39 32 chr15 95286904 95287215 -8207759 + MTE-int LTR MaLR 31 343 -1237 3 1311 414 289 38 30 chr15 95287274 95287406 -8207568 + MTE2b LTR MaLR 247 379 0 3 1311 2479 102 6 3 chr15 95288392 95288718 -8206256 - ORR1A2 LTR MaLR 0 327 1 3 1311 324 143 0 0 chr15 95288760 95288816 -8206158 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1311 603 337 80 11 chr15 95288872 95289136 -8205838 - B4A SINE B4 -9 283 2 3 1312 350 275 29 37 chr15 95290440 95290576 -8204398 + MIR SINE MIR 127 261 -1 3 1312 238 232 60 24 chr15 95291401 95291485 -8203489 + L1MC4 LINE L1 7232 7318 -724 3 1312 231 207 17 33 chr15 95291953 95292013 -8202961 + A-rich Low_complexity Low_complexity 2 60 0 3 1312 561 55 0 0 chr15 95292152 95292225 -8202749 + (TG)n Simple_repeat Simple_repeat 1 73 0 4 1312 272 333 0 29 chr15 95292257 95292359 -8202615 - RSINE1 SINE B4 -65 100 2 4 1312 21 0 0 0 chr15 95293170 95293191 -8201783 + AT_rich Low_complexity Low_complexity 1 21 0 4 1312 1375 142 5 18 chr15 95293463 95293686 -8201288 - URR1A DNA MER1_type 0 226 7 4 1312 1389 94 17 0 chr15 95294232 95294412 -8200562 + B2_Mm2 SINE B2 2 184 -11 4 1312 369 89 0 0 chr15 95294557 95294582 -8200392 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1312 1244 75 0 0 chr15 95294582 95294729 -8200245 + B1_Mus2 SINE Alu 1 147 0 4 1312 369 89 0 0 chr15 95294729 95294759 -8200215 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1312 1840 188 68 0 chr15 95295462 95295846 -8199128 + Lx4B LINE L1 6017 6426 -632 4 1312 736 261 18 12 chr15 95299263 95299426 -8195548 + RSINE1 SINE B4 2 165 0 4 1312 674 290 53 53 chr15 95301523 95301807 -8193167 + B4A SINE B4 1 284 -8 4 1312 245 319 46 33 chr15 95303066 95303241 -8191733 - MIR SINE MIR -43 225 50 4 1312 378 282 111 32 chr15 95304935 95305188 -8189786 + L1MA9 LINE L1 6027 6299 -13 4 1312 653 262 88 46 chr15 95305376 95305704 -8189270 - L1M3 LINE L1 -1498 4642 4301 4 1312 207 277 104 26 chr15 95306138 95306253 -8188721 - MIRb SINE MIR -30 238 115 4 1312 790 162 205 6 chr15 95306677 95306838 -8188136 + B2_Mm2 SINE B2 1 193 -2 4 1312 23 0 0 0 chr15 95307366 95307389 -8187585 + AT_rich Low_complexity Low_complexity 1 23 0 4 1312 353 284 37 0 chr15 95307493 95307602 -8187372 - MER67D LTR ERV1 -401 113 1 4 1312 3180 74 2 49 chr15 95307677 95308105 -8186869 - L1_Mus2 LINE L1 0 6566 6159 4 1312 415 60 15 15 chr15 95308955 95309023 -8185951 + (TAA)n Simple_repeat Simple_repeat 2 69 0 4 1312 348 263 122 115 chr15 95309600 95309853 -8185121 - MTEa LTR MaLR -8 371 103 4 1312 365 294 102 76 chr15 95310191 95310427 -8184547 + MLT1J LTR MaLR 2 243 -269 4 1312 843 283 91 38 chr15 95311065 95311351 -8183623 + MTEa LTR MaLR 20 314 -65 4 1312 198 0 0 0 chr15 95311351 95311373 -8183601 + (CTAA)n Simple_repeat Simple_repeat 4 25 0 4 1312 843 283 91 38 chr15 95311373 95311428 -8183546 + MTEa LTR MaLR 315 379 0 4 1312 2244 289 66 81 chr15 95311511 95312093 -8182881 + MTD-int LTR MaLR 163 720 -860 4 1312 2478 147 26 0 chr15 95312093 95312473 -8182501 + ORR1B1 LTR MaLR 2 391 -3 4 1312 2244 289 66 81 chr15 95312473 95312839 -8182135 + MTD-int LTR MaLR 721 1097 -483 4 1312 1480 273 12 5 chr15 95312876 95313277 -8181697 + MERVL_2A-int LTR ERVL 3722 4125 -1636 4 1312 1218 297 31 31 chr15 95313282 95313737 -8181237 + MERVL_2A-int LTR ERVL 4765 5219 -542 4 1312 1026 200 36 69 chr15 95313782 95314029 -8180945 + MERVL_2A-int LTR ERVL 5319 5557 -204 4 1312 756 55 0 0 chr15 95314115 95314206 -8180768 + L1Md_F2 LINE L1 5496 5586 -297 4 1312 8921 33 2 7 chr15 95314207 95315155 -8179819 + L1Md_F2 LINE L1 5588 6536 -46 4 1312 3720 15 2 0 chr15 95315155 95315550 -8179424 - MTA_Mm LTR MaLR 0 396 1 4 1312 8921 33 2 7 chr15 95315550 95315601 -8179373 + L1Md_F2 LINE L1 6537 6582 0 4 1312 415 304 14 21 chr15 95315660 95315801 -8179173 + MTD-int LTR MaLR 1124 1263 -317 4 1312 254 316 21 21 chr15 95315929 95316026 -8178948 + MTD-int LTR MaLR 1484 1580 0 4 1312 276 257 65 65 chr15 95316032 95316140 -8178834 + MTD LTR MaLR 8 115 -304 4 1312 186 291 58 84 chr15 95318400 95318554 -8176420 - L2c LINE L2 -320 3067 2918 4 1312 203 389 0 0 chr15 95319437 95319509 -8175465 + L2a LINE L2 3351 3422 -4 4 1312 464 303 121 15 chr15 95319632 95319830 -8175144 - MER20 DNA MER1_type 0 219 1 4 1312 1426 226 132 65 chr15 95320098 95320148 -8174826 + RMER4B LTR ERVK 1 52 -533 4 1312 2237 94 18 48 chr15 95320148 95320482 -8174492 - ORR1A2 LTR MaLR -1 326 3 4 1312 1426 226 128 62 chr15 95320482 95320946 -8174028 + RMER4B LTR ERVK 53 588 -23 4 1312 21 89 0 0 chr15 95321058 95321114 -8173860 + AT_rich Low_complexity Low_complexity 1 56 0 4 1312 225 283 0 0 chr15 95321338 95321391 -8173583 - ID4_ SINE ID -30 53 1 4 1312 275 234 155 31 chr15 95321398 95321495 -8173479 - PB1D10 SINE Alu -2 115 7 4 1312 443 287 57 0 chr15 95321803 95321925 -8173049 + RSINE1 SINE B4 2 130 -35 4 1312 377 289 76 29 chr15 95322083 95322293 -8172681 - L1MA6 LINE L1 0 6300 6081 4 1312 186 263 0 109 chr15 95322320 95322384 -8172590 + MIRc SINE MIR 102 158 -110 4 1312 672 249 80 38 chr15 95323141 95323354 -8171620 + MTE2a LTR MaLR 15 236 -143 4 1312 189 171 0 0 chr15 95323354 95323389 -8171585 + (ATGTG)n Simple_repeat Simple_repeat 4 38 0 4 1312 699 210 22 7 chr15 95323426 95323565 -8171409 + MTE2a LTR MaLR 224 364 -15 4 1312 2566 145 17 5 chr15 95323635 95324043 -8170931 + MTC LTR MaLR 1 413 -8 4 1312 327 25 0 0 chr15 95324866 95324906 -8170068 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 1312 897 156 126 6 chr15 95326510 95326684 -8168290 - URR1A DNA MER1_type -31 195 1 4 1312 453 323 81 16 chr15 95327202 95327460 -8167514 + L1M5 LINE L1 4906 5180 -966 4 1312 310 58 19 37 chr15 95327945 95327999 -8166975 + (CATA)n Simple_repeat Simple_repeat 3 55 0 4 1312 630 296 33 36 chr15 95328080 95328135 -8166839 + L1_Mur3 LINE L1 4942 4999 -881 4 1312 475 299 38 13 chr15 95328135 95328294 -8166680 + RSINE1 SINE B4 1 163 -2 4 1312 630 296 35 35 chr15 95328294 95328588 -8166386 + L1_Mur3 LINE L1 5000 5328 -818 4 1312 3296 292 49 97 chr15 95329312 95331365 -8163609 + L1_Mur3 LINE L1 1372 3372 -2508 4 1312 6062 71 15 1 chr15 95331365 95332116 -8162858 + L1_Mus3 LINE L1 5877 6637 -1 4 1312 3058 291 49 99 chr15 95332116 95332797 -8162177 + L1_Mur3 LINE L1 3370 3975 -1902 4 1312 824 258 121 18 chr15 95332795 95333075 -8161899 + Lx6 LINE L1 7143 7451 -9 4 1312 384 77 0 0 chr15 95333090 95333142 -8161832 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 1312 240 122 0 0 chr15 95333142 95333183 -8161791 + U5 snRNA snRNA 4 44 -72 4 1312 1038 223 36 121 chr15 95333191 95333629 -8161345 + L1_Mur3 LINE L1 3975 4375 -1505 4 1312 1006 168 134 5 chr15 95333636 95333822 -8161152 + B3 SINE B2 1 210 -6 4 1312 1607 293 155 21 chr15 95333905 95335088 -8159886 + Lx8 LINE L1 6132 7473 0 4 1312 318 336 9 0 chr15 95335100 95335207 -8159767 - Lx8 LINE L1 -151 7322 7215 4 1312 239 283 68 34 chr15 95335216 95335333 -8159641 + Lx8 LINE L1 7353 7473 0 4 1312 23 33 0 0 chr15 95335952 95335982 -8158992 + AT_rich Low_complexity Low_complexity 1 30 0 4 1312 947 258 15 0 chr15 95335982 95336180 -8158794 - B3 SINE B2 -11 205 5 4 1312 863 166 0 33 chr15 95336275 95336425 -8158549 - B1_Mur4 SINE Alu -5 145 1 4 1312 626 95 0 10 chr15 95336762 95336858 -8158116 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 4 1312 246 182 36 18 chr15 95337172 95337228 -8157746 - ID2 SINE ID -15 68 12 4 1312 414 247 22 0 chr15 95337245 95337334 -8157640 - PB1D10 SINE Alu -6 111 21 4 1312 495 292 62 0 chr15 95338242 95338372 -8156602 + RSINE1 SINE B4 11 148 -17 4 1312 1096 101 14 4 chr15 95338388 95338673 -8156301 + (TAGA)n Simple_repeat Simple_repeat 1 288 0 4 1312 1059 130 0 0 chr15 95339649 95339795 -8155179 - B1_Mus2 SINE Alu 0 147 2 4 1312 437 269 7 7 chr15 95339850 95339992 -8154982 + L1MD LINE L1 5135 5276 -870 4 1312 369 197 0 0 chr15 95339992 95340068 -8154906 + (TA)n Simple_repeat Simple_repeat 1 76 0 4 1312 601 247 124 121 chr15 95340847 95341137 -8153837 + B4A SINE B4 2 292 0 4 1312 360 111 0 0 chr15 95342082 95342136 -8152838 + (CAGA)n Simple_repeat Simple_repeat 2 55 0 4 1312 840 108 24 12 chr15 95342171 95342339 -8152635 + (TAGA)n Simple_repeat Simple_repeat 2 171 0 4 1312 8125 75 6 6 chr15 95342631 95343900 -8151074 - L1_Mus3 LINE L1 0 6638 5369 4 1312 315 0 0 0 chr15 95344375 95344410 -8150564 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1312 524 152 158 0 chr15 95346713 95346877 -8148097 - MER33 DNA MER1_type -33 291 102 4 1312 237 210 159 16 chr15 95347607 95347670 -8147304 - PB1 SINE Alu -20 107 36 4 1312 264 333 12 12 chr15 95347674 95347759 -8147215 - MIR SINE MIR -169 93 9 4 1312 188 35 35 0 chr15 95348477 95348506 -8146468 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 1312 383 314 70 76 chr15 95348752 95349211 -8145763 - MLT1D LTR MaLR -12 493 1 4 1312 23 0 0 71 chr15 95349296 95349338 -8145636 + AT_rich Low_complexity Low_complexity 1 39 0 4 1312 852 201 57 38 chr15 95349350 95349562 -8145412 - B3 SINE B2 0 216 1 4 1312 1677 242 46 15 chr15 95349833 95350223 -8144751 - MTD LTR MaLR 0 419 18 4 1312 283 0 23 45 chr15 95350224 95350268 -8144706 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1312 390 364 71 7 chr15 95350343 95350484 -8144490 + RSINE1 SINE B4 9 158 -7 4 1312 735 266 162 59 chr15 95351386 95351774 -8143200 + MTE-int LTR MaLR 74 501 -1079 4 1312 511 270 122 80 chr15 95351821 95351916 -8143058 + ID_B1 SINE B4 1 222 -2 4 1312 623 178 169 0 chr15 95351916 95352034 -8142940 + B1_Mur3 SINE Alu 10 147 -2 4 1312 720 80 0 0 chr15 95352042 95352142 -8142832 + (GAAA)n Simple_repeat Simple_repeat 4 103 0 4 1312 603 0 0 0 chr15 95352142 95352209 -8142765 + (GAGAA)n Simple_repeat Simple_repeat 1 67 0 4 1312 694 318 10 0 chr15 95352221 95352422 -8142552 + B4 SINE B4 86 288 -4 4 1312 352 284 169 36 chr15 95352499 95352718 -8142256 + MLT1A0 LTR MaLR 1 248 -117 4 1312 247 205 11 74 chr15 95352718 95352813 -8142161 + L1M4 LINE L1 3072 3164 -2982 4 1312 1066 90 6 12 chr15 95352842 95352886 -8142088 + (GAAA)n Simple_repeat Simple_repeat 1 44 0 4 1312 576 0 0 0 chr15 95352886 95352950 -8142024 + (GGGA)n Simple_repeat Simple_repeat 2 65 0 4 1312 1066 90 6 12 chr15 95352950 95353073 -8141901 + (GAAA)n Simple_repeat Simple_repeat 1 122 0 4 1312 258 242 0 0 chr15 95353075 95353141 -8141833 + GA-rich Low_complexity Low_complexity 6 71 0 4 1312 230 286 110 8 chr15 95353239 95353366 -8141608 + L1M4 LINE L1 3207 3346 -2794 4 1312 324 243 102 0 chr15 95353389 95353499 -8141475 - MLT1D-int LTR MaLR -1287 122 2 4 1312 233 245 57 0 chr15 95353574 95353627 -8141347 - MLT1D LTR MaLR -64 441 386 4 1312 188 306 88 53 chr15 95353691 95353805 -8141169 - MIRb SINE MIR -132 136 19 4 1312 795 275 86 99 chr15 95353867 95354251 -8140723 + MTEb LTR MaLR 1 379 0 4 1312 263 28 28 0 chr15 95356775 95356811 -8138163 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1312 232 178 22 0 chr15 95357503 95357548 -8137426 + GA-rich Low_complexity Low_complexity 3 48 0 4 1312 22 35 0 0 chr15 95358431 95358460 -8136514 + GC_rich Low_complexity Low_complexity 1 29 0 5 1312 29 47 0 0 chr15 95358615 95358658 -8136316 + GC_rich Low_complexity Low_complexity 1 43 0 5 1312 29 28 0 0 chr15 95358718 95358754 -8136220 + GC_rich Low_complexity Low_complexity 1 36 0 5 1312 405 39 0 0 chr15 95359425 95359476 -8135498 + (TGGA)n Simple_repeat Simple_repeat 4 54 0 5 1312 231 292 22 0 chr15 95359478 95359567 -8135407 + (TAGA)n Simple_repeat Simple_repeat 3 93 0 5 1312 196 55 17 85 chr15 95360244 95360303 -8134671 + (TATAA)n Simple_repeat Simple_repeat 4 58 0 5 1312 535 309 66 11 chr15 95360692 95360875 -8134099 + ID_B1 SINE B4 18 210 -14 5 1312 427 340 154 60 chr15 95361457 95361776 -8133198 - MLT1D LTR MaLR -133 372 24 5 1312 396 240 124 27 chr15 95361985 95362367 -8132607 + L1MEf LINE L1 1965 2386 -3760 5 1312 584 282 63 69 chr15 95362596 95363057 -8131917 + L1MEf LINE L1 3516 3973 -2173 5 1312 324 296 171 19 chr15 95363360 95363629 -8131345 + L1M5 LINE L1 4365 4674 -1472 5 1312 576 42 0 0 chr15 95363761 95363832 -8131142 + (TA)n Simple_repeat Simple_repeat 2 72 0 5 1312 253 263 42 42 chr15 95363932 95364075 -8130899 + L1M2 LINE L1 5743 5885 -415 5 1312 369 301 92 43 chr15 95364147 95364494 -8130480 + L1MEf LINE L1 4968 5331 -815 5 1312 321 26 0 0 chr15 95365012 95365050 -8129924 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1312 1164 196 163 109 chr15 95365518 95365910 -8129064 + RLTR20A2 LTR ERVK 31 476 -102 5 1312 600 14 0 0 chr15 95365910 95365979 -8128995 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 1312 1164 232 86 36 chr15 95365979 95366070 -8128904 + RLTR20A2 LTR ERVK 477 573 -5 5 1312 182 296 73 18 chr15 95368390 95368445 -8126529 + MIRb SINE MIR 192 249 -19 5 1312 234 193 148 66 chr15 95368846 95368968 -8126006 - MamGypLTR2c LTR Gypsy 0 1068 937 5 1312 269 285 20 20 chr15 95369056 95369167 -8125807 - MIR SINE MIR -71 137 22 5 1312 817 273 19 5 chr15 95369990 95370196 -8124778 - B3 SINE B2 -6 210 2 5 1312 23 0 0 0 chr15 95370245 95370268 -8124706 + AT_rich Low_complexity Low_complexity 1 23 0 5 1312 545 341 104 62 chr15 95370689 95371189 -8123785 - Charlie10 DNA MER1_type -643 2179 1659 5 1312 618 283 107 35 chr15 95371559 95371877 -8123097 - Charlie10 DNA MER1_type -1173 1649 1309 5 1312 208 261 0 42 chr15 95372459 95372531 -8122443 + GA-rich Low_complexity Low_complexity 2 70 0 5 1312 248 53 26 0 chr15 95372673 95372711 -8122263 + (CCCCCT)n Simple_repeat Simple_repeat 6 44 0 5 1312 421 277 54 47 chr15 95373058 95373206 -8121768 - MLT1A0 LTR MaLR -216 149 1 5 1312 384 119 0 0 chr15 95375077 95375136 -8119838 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1312 245 222 77 48 chr15 95375194 95375289 -8119685 - Lx7 LINE L1 -1842 5854 5756 5 1312 641 287 38 0 chr15 95375289 95375446 -8119528 + RSINE1 SINE B4 3 165 0 5 1312 180 200 0 0 chr15 95375457 95375502 -8119472 + (CATA)n Simple_repeat Simple_repeat 2 46 0 5 1312 992 273 85 24 chr15 95375535 95375948 -8119026 - L1M2 LINE L1 -513 5784 5347 5 1312 651 42 32 0 chr15 95376004 95376099 -8118875 + (TC)n Simple_repeat Simple_repeat 1 98 0 5 1312 1596 232 27 106 chr15 95376110 95376674 -8118300 - Lx7 LINE L1 -46 7650 7132 5 1312 4529 214 42 13 chr15 95376685 95378122 -8116852 - Lx7 LINE L1 -1024 6672 5186 5 1312 1260 82 21 16 chr15 95378148 95378334 -8116640 + RLTR9A LTR ERVK 1 187 -181 5 1312 2549 208 83 3 chr15 95378346 95378939 -8116035 - Lx7 LINE L1 -1221 4659 4020 5 1312 213 94 0 0 chr15 95379668 95379700 -8115274 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 1312 4836 50 9 4 chr15 95379700 95380257 -8114717 - LTRIS2 LTR ERV1 0 564 5 5 1312 213 39 0 0 chr15 95380259 95380285 -8114689 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1312 284 222 0 47 chr15 95381167 95381252 -8113722 + GA-rich Low_complexity Low_complexity 3 83 0 5 1312 808 280 35 5 chr15 95381825 95382026 -8112948 + B3 SINE B2 1 207 -9 5 1312 26971 55 5 6 chr15 95382132 95384707 -8110267 + L1Md_F3 LINE L1 2176 4736 -1147 5 1312 376 18 54 0 chr15 95384707 95384763 -8110211 + (CAAAA)n Simple_repeat Simple_repeat 3 61 0 5 1312 26971 55 5 6 chr15 95384763 95385599 -8109375 + L1Md_F3 LINE L1 4737 5586 -297 5 1312 8766 37 2 7 chr15 95385599 95386600 -8108374 + L1Md_F3 LINE L1 5587 6582 -2 5 1312 368 192 95 9 chr15 95386849 95386954 -8108020 + PB1D7 SINE Alu 1 114 -6 5 1312 277 261 56 22 chr15 95387625 95387715 -8107259 + B1F SINE Alu 52 144 -5 5 1312 186 71 0 0 chr15 95387806 95387834 -8107140 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 5 1312 323 231 114 9 chr15 95388197 95388302 -8106672 - MLT1A1 LTR MaLR -2 406 291 5 1312 383 341 68 42 chr15 95388691 95389000 -8105974 - MLT-int LTR MaLR -1081 654 338 5 1312 343 312 19 77 chr15 95389057 95389213 -8105761 - RSINE1 SINE B4 -15 150 4 5 1312 1536 204 70 22 chr15 95389497 95389689 -8105285 - ORR1D1 LTR MaLR 0 374 177 5 1312 579 29 0 0 chr15 95389689 95389758 -8105216 + (GA)n Simple_repeat Simple_repeat 2 70 0 5 1312 1536 204 70 22 chr15 95389758 95389922 -8105052 - ORR1D1 LTR MaLR -198 176 3 5 1312 218 317 48 0 chr15 95390794 95390898 -8104076 - L2 LINE L2 -1001 2418 2310 5 1312 423 0 0 0 chr15 95391599 95391646 -8103328 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1312 453 128 0 44 chr15 95392115 95392229 -8102745 + (CATA)n Simple_repeat Simple_repeat 3 111 0 5 1312 225 0 0 0 chr15 95392261 95392286 -8102688 + (CATA)n Simple_repeat Simple_repeat 3 27 0 5 1312 225 0 0 0 chr15 95392322 95392347 -8102627 + (CATA)n Simple_repeat Simple_repeat 3 27 0 5 1312 573 144 0 54 chr15 95392380 95392564 -8102410 + (CATA)n Simple_repeat Simple_repeat 2 175 0 5 1312 600 141 0 53 chr15 95392596 95392783 -8102191 + (CATA)n Simple_repeat Simple_repeat 3 179 0 5 1312 559 268 46 82 chr15 95393199 95393394 -8101580 + ID_B1 SINE B4 12 199 -25 5 1312 253 203 15 30 chr15 95393784 95393850 -8101124 - MER5B DNA MER1_type -110 68 4 5 1312 321 336 55 115 chr15 95394030 95394389 -8100585 + MLT1E1A LTR MaLR 219 675 -5 5 1312 1149 62 0 0 chr15 95395038 95395182 -8099792 + B1_Mus1 SINE Alu 5 148 0 5 1312 21 0 0 0 chr15 95395182 95395203 -8099771 + AT_rich Low_complexity Low_complexity 1 21 0 5 1312 902 255 136 17 chr15 95395460 95395870 -8099104 - L1MA4 LINE L1 -282 6018 5560 5 1312 240 277 73 21 chr15 95396136 95396232 -8098742 + L1MA5 LINE L1 6188 6288 -12 5 1312 321 264 55 122 chr15 95396793 95397030 -8097944 + MLT1B LTR MaLR 103 323 -67 5 1312 21 0 0 0 chr15 95397929 95397950 -8097024 + AT_rich Low_complexity Low_complexity 1 21 0 5 1312 332 264 142 38 chr15 95398108 95398348 -8096626 + MLT1C LTR MaLR 98 362 -105 5 1312 1192 65 35 0 chr15 95399731 95399900 -8095074 + B2_Mm2 SINE B2 14 188 -7 5 1312 773 237 43 14 chr15 95401606 95401802 -8093172 + B3 SINE B2 6 188 -7 5 1312 183 439 0 0 chr15 95403861 95403991 -8090983 + MIRb SINE MIR 77 206 -62 5 1312 911 228 45 96 chr15 95406256 95406591 -8088383 - MTEa LTR MaLR 0 379 62 5 1312 247 289 142 99 chr15 95406427 95406638 -8088336 - MLT2B1 LTR ERVL -280 240 21 5 1312 432 305 48 63 chr15 95407409 95407741 -8087233 + RodERV21-int LTR ERV1 8 334 -4657 5 1312 1531 278 96 34 chr15 95407953 95408435 -8086539 + RodERV21-int LTR ERV1 689 1208 -3783 5 1312 717 12 0 0 chr15 95408435 95408517 -8086457 + (TC)n Simple_repeat Simple_repeat 1 82 0 5 1312 1531 278 96 34 chr15 95408517 95408704 -8086270 + RodERV21-int LTR ERV1 1209 1399 -3592 5 1312 30 0 0 0 chr15 95408722 95408752 -8086222 + AT_rich Low_complexity Low_complexity 1 30 0 5 1312 3597 321 49 51 chr15 95408783 95408884 -8086090 + RodERV21-int LTR ERV1 2762 2862 -2129 5 1312 4468 148 65 64 chr15 95408884 95409785 -8085189 + RMER19B LTR ERVK 1 902 0 5 1312 3597 321 49 51 chr15 95409785 95411666 -8083308 + RodERV21-int LTR ERV1 2863 4740 -251 5 1312 261 0 0 0 chr15 95411666 95411695 -8083279 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1312 3597 321 49 51 chr15 95411695 95411813 -8083161 + RodERV21-int LTR ERV1 4741 4857 -134 5 1312 368 71 18 0 chr15 95412694 95412750 -8082224 + (TTG)n Simple_repeat Simple_repeat 1 57 0 5 1312 411 256 43 50 chr15 95412819 95412959 -8082015 - B4A SINE B4 -149 143 5 5 1312 21 36 0 0 chr15 95413869 95413897 -8081077 + AT_rich Low_complexity Low_complexity 1 28 0 5 1312 193 377 57 0 chr15 95414956 95415131 -8079843 - L2 LINE L2 -1822 1597 1413 5 1312 186 327 158 31 chr15 95415573 95415832 -8079142 - L2 LINE L2 -2299 1120 829 5 1312 425 233 154 8 chr15 95416752 95416869 -8078105 - RSINE1 SINE B4 -28 137 4 5 1312 24 0 0 0 chr15 95417015 95417039 -8077935 + AT_rich Low_complexity Low_complexity 1 24 0 5 1312 256 263 115 48 chr15 95417928 95418032 -8076942 - MER2B DNA MER2_type -8 328 218 5 1312 347 176 24 0 chr15 95418182 95418267 -8076707 + (CAGAGA)n Simple_repeat Simple_repeat 4 90 0 5 1312 230 95 0 23 chr15 95418266 95418309 -8076665 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 1312 1554 39 5 9 chr15 95418609 95418819 -8076155 + MTA_Mm LTR MaLR 1 209 -187 5 1312 1336 57 65 19 chr15 95418789 95419004 -8075970 - ORR1A1 LTR MaLR -121 225 1 5 1312 22 0 0 0 chr15 95419030 95419052 -8075922 + AT_rich Low_complexity Low_complexity 1 22 0 5 1313 21 36 0 0 chr15 95420956 95420984 -8073990 + AT_rich Low_complexity Low_complexity 1 28 0 5 1313 1466 278 20 14 chr15 95421068 95421522 -8073452 - Lx8 LINE L1 -775 6685 6234 5 1313 195 304 0 0 chr15 95421543 95421599 -8073375 - L2a LINE L2 -4 3422 3367 5 1313 2140 119 3 6 chr15 95421605 95421917 -8073057 - RLTR10E LTR ERVK 0 311 1 5 1313 225 355 70 9 chr15 95422072 95422285 -8072689 - L2a LINE L2 -544 2875 2650 5 1313 646 346 69 15 chr15 95423285 95423433 -8071541 - MLT1A0 LTR MaLR -13 352 194 5 1313 2012 101 104 3 chr15 95423433 95423730 -8071244 - ORR1A2 LTR MaLR 0 327 1 5 1313 646 346 69 15 chr15 95423730 95423915 -8071059 - MLT1A0 LTR MaLR -172 193 1 5 1313 300 276 67 50 chr15 95423933 95424112 -8070862 + MLT1E2 LTR MaLR 44 225 -402 5 1313 204 40 0 0 chr15 95424138 95424163 -8070811 + (TTG)n Simple_repeat Simple_repeat 2 26 0 5 1313 332 281 68 40 chr15 95424199 95424427 -8070547 + MTEa LTR MaLR 86 372 -7 5 1313 446 319 127 17 chr15 95424469 95424912 -8070062 + L1ME1 LINE L1 5658 6150 -12 5 1313 2456 41 0 6 chr15 95425073 95425393 -8069581 - MTB LTR MaLR -2 398 81 5 1313 1173 70 0 0 chr15 95425403 95425559 -8069415 + (CATATA)n Simple_repeat Simple_repeat 3 158 0 5 1313 22 35 0 0 chr15 95425581 95425610 -8069364 + AT_rich Low_complexity Low_complexity 1 29 0 5 1313 28 0 0 0 chr15 95425963 95425991 -8068983 + AT_rich Low_complexity Low_complexity 1 28 0 5 1313 1046 258 131 18 chr15 95426060 95426458 -8068516 - MER67C LTR ERV1 -264 447 5 5 1313 43 35 0 0 chr15 95426460 95426517 -8068457 + AT_rich Low_complexity Low_complexity 1 57 0 5 1313 183 242 0 0 chr15 95426683 95426745 -8068229 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 1313 492 52 30 40 chr15 95427081 95427181 -8067793 + (TAGA)n Simple_repeat Simple_repeat 3 101 0 5 1313 204 125 0 0 chr15 95427181 95427213 -8067761 + (CATA)n Simple_repeat Simple_repeat 1 32 0 6 1313 2475 140 28 61 chr15 95427224 95427377 -8067597 - RMER6B LTR ERVK -1 460 298 6 1313 219 36 0 0 chr15 95427377 95427405 -8067569 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 1313 2475 140 28 61 chr15 95427405 95427724 -8067250 - RMER6B LTR ERVK -164 297 4 6 1313 297 51 0 0 chr15 95427726 95427765 -8067209 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 6 1313 22 80 0 0 chr15 95427961 95428011 -8066963 + AT_rich Low_complexity Low_complexity 1 50 0 6 1313 267 31 0 0 chr15 95429463 95429495 -8065479 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1313 484 257 19 0 chr15 95430114 95430219 -8064755 + PB1D7 SINE Alu 1 107 -13 6 1313 198 91 0 0 chr15 95430391 95430424 -8064550 + (A)n Simple_repeat Simple_repeat 1 33 0 6 1313 285 29 0 0 chr15 95430919 95430953 -8064021 + (TTA)n Simple_repeat Simple_repeat 2 35 0 6 1313 342 61 0 0 chr15 95431312 95431361 -8063613 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 1313 396 0 0 0 chr15 95431361 95431405 -8063569 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1313 322 70 140 0 chr15 95432411 95432468 -8062506 - ORR1A2 LTR MaLR -1 326 262 6 1313 724 139 20 62 chr15 95432466 95432612 -8062362 - B2_Mm2 SINE B2 -14 181 42 6 1313 1766 124 14 14 chr15 95432622 95432908 -8062066 - ORR1A2 LTR MaLR -41 286 1 6 1313 295 323 27 7 chr15 95433562 95433738 -8061236 - L1_Mur3 LINE L1 -2213 3930 3746 6 1313 274 303 61 60 chr15 95433859 95433954 -8061020 - L1_Mur3 LINE L1 -2705 3438 3332 6 1313 9234 78 5 28 chr15 95433954 95435251 -8059723 - Lx3_Mus LINE L1 0 7009 5742 6 1313 274 297 65 65 chr15 95435251 95435463 -8059511 - L1_Mur3 LINE L1 -2516 3331 3115 6 1313 4440 123 54 8 chr15 95435633 95436352 -8058622 + RMER6A LTR ERVK 1 752 -4 6 1313 934 291 45 46 chr15 95436488 95436995 -8057979 - L1MA4A LINE L1 -378 5925 5408 6 1313 547 178 30 0 chr15 95436995 95437096 -8057878 - U6 snRNA snRNA -3 104 1 6 1313 676 313 49 116 chr15 95437096 95437481 -8057493 - L1MA4A LINE L1 -473 5407 5053 6 1313 453 172 0 0 chr15 95437504 95437597 -8057377 + (TG)n Simple_repeat Simple_repeat 2 94 0 6 1313 385 281 68 48 chr15 95437602 95437630 -8057344 + CYRA11_Mm Unknown Y-chromosome 136 167 -450 6 1313 952 165 16 26 chr15 95437630 95437823 -8057151 - URR1B DNA MER1_type 0 225 35 6 1313 838 299 6 19 chr15 95437835 95438149 -8056825 - L1MA4A LINE L1 -879 5001 4692 6 1313 438 284 197 39 chr15 95440583 95440775 -8054199 + B4A SINE B4 15 245 -47 6 1313 2427 93 12 0 chr15 95440775 95441098 -8053876 - ORR1A2 LTR MaLR 0 327 1 6 1313 438 284 197 39 chr15 95441098 95441139 -8053835 + B4A SINE B4 246 285 -7 6 1313 1352 91 32 0 chr15 95441755 95441941 -8053033 + B2_Mm2 SINE B2 3 194 -1 6 1313 292 229 83 12 chr15 95442323 95442407 -8052567 - MER20 DNA MER1_type -7 212 123 6 1313 538 40 0 13 chr15 95442715 95442791 -8052183 + B1_Mur4 SINE Alu 71 145 -5 6 1313 871 168 6 16 chr15 95442831 95443013 -8051961 + GA-rich Low_complexity Low_complexity 1 180 0 6 1313 246 94 0 0 chr15 95443013 95443045 -8051929 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 6 1313 2444 98 3 0 chr15 95444375 95444701 -8050273 - ORR1A2 LTR MaLR 0 327 1 6 1313 234 324 179 18 chr15 95445285 95445508 -8049466 + L2a LINE L2 2635 2893 -526 6 1313 520 159 47 111 chr15 95445653 95445803 -8049171 - MTE2a LTR MaLR -2 405 248 6 1313 2519 214 85 66 chr15 95445803 95446677 -8048297 + RMER19B LTR ERVK 1 890 -12 6 1313 445 299 22 169 chr15 95446698 95446976 -8047998 - MTE2a LTR MaLR -137 242 6 6 1313 192 302 0 0 chr15 95446985 95447038 -8047936 + L2a LINE L2 3042 3094 -332 6 1313 315 0 0 0 chr15 95447176 95447211 -8047763 + (A)n Simple_repeat Simple_repeat 1 35 0 6 1313 245 192 58 0 chr15 95447344 95447396 -8047578 - MurSatRep1 Unknown Unknown -1854 283 229 6 1313 338 288 90 8 chr15 95449622 95449755 -8045219 + MLT1D LTR MaLR 49 192 -313 6 1313 207 100 0 0 chr15 95449880 95449910 -8045064 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1313 24 53 0 0 chr15 95451664 95451702 -8043272 + AT_rich Low_complexity Low_complexity 1 38 0 6 1313 258 32 0 0 chr15 95452079 95452110 -8042864 + (TA)n Simple_repeat Simple_repeat 2 32 0 6 1313 210 337 11 34 chr15 95453456 95453545 -8041429 + MIRb SINE MIR 168 254 -14 6 1313 207 0 0 0 chr15 95453730 95453753 -8041221 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 6 1313 252 0 0 0 chr15 95453965 95453993 -8040981 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1313 576 65 0 0 chr15 95455898 95455975 -8038999 + (TG)n Simple_repeat Simple_repeat 1 77 0 6 1313 291 268 24 31 chr15 95456005 95456132 -8038842 + (TG)n Simple_repeat Simple_repeat 2 127 0 6 1313 1122 141 97 0 chr15 95456771 95456977 -8037997 - URR1A DNA MER1_type 0 226 1 6 1313 896 275 10 0 chr15 95457083 95457161 -8037813 + ID SINE ID 2 81 -143 6 1313 371 333 28 7 chr15 95457161 95457292 -8037682 + B1_Mur3 SINE Alu 1 133 -16 6 1313 333 0 0 0 chr15 95457292 95457329 -8037645 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 1313 371 333 28 7 chr15 95457329 95457342 -8037632 + B1_Mur3 SINE Alu 134 146 -3 6 1313 383 247 0 6 chr15 95457660 95457835 -8037139 + (TG)n Simple_repeat Simple_repeat 2 175 0 6 1313 448 306 46 34 chr15 95458050 95458287 -8036687 + L1M5 LINE L1 4966 5205 -941 6 1313 904 298 34 101 chr15 95458293 95458857 -8036117 + L1MB3 LINE L1 5648 6173 -10 6 1313 333 0 0 0 chr15 95459791 95459828 -8035146 + (CAT)n Simple_repeat Simple_repeat 3 39 0 6 1313 1899 106 12 62 chr15 95460644 95460967 -8034007 - ORR1A2 LTR MaLR 0 327 21 6 1313 295 210 22 38 chr15 95461828 95462011 -8032963 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 1313 293 218 39 19 chr15 95462031 95462134 -8032840 + (TA)n Simple_repeat Simple_repeat 1 105 0 6 1313 468 259 125 56 chr15 95462143 95462462 -8032512 - RLTR15 LTR ERVK -18 341 1 6 1313 385 133 13 13 chr15 95463174 95463250 -8031724 + (CATATA)n Simple_repeat Simple_repeat 4 79 0 6 1313 3031 81 65 49 chr15 95463250 95463744 -8031230 + RLTR44C LTR ERVK 1 502 0 6 1313 358 128 0 0 chr15 95463744 95463791 -8031183 + RLTR44-int LTR ERVK 1 47 -2765 6 1313 633 110 111 4 chr15 95463791 95463925 -8031049 + RLTR44C LTR ERVK 313 502 0 6 1313 255 190 0 0 chr15 95463925 95463983 -8030991 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 6 1313 3548 158 8 37 chr15 95466307 95466932 -8028042 + Lx2 LINE L1 6348 6954 -43 6 1313 213 121 0 0 chr15 95468633 95468666 -8026308 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 1313 21 0 0 0 chr15 95468703 95468724 -8026250 + AT_rich Low_complexity Low_complexity 1 21 0 6 1313 216 158 0 0 chr15 95468748 95468786 -8026188 + T-rich Low_complexity Low_complexity 1 38 0 6 1313 336 341 81 12 chr15 95471467 95471639 -8023335 + MER3 DNA MER1_type 22 205 -4 6 1313 655 299 125 25 chr15 95472988 95473348 -8021626 + Lx8 LINE L1 7078 7473 0 6 1313 324 0 0 0 chr15 95473915 95473951 -8021023 + (A)n Simple_repeat Simple_repeat 1 36 0 6 1313 256 250 0 45 chr15 95476103 95476170 -8018804 - MER5B DNA MER1_type -13 165 102 6 1313 191 121 30 0 chr15 95476288 95476321 -8018653 + MIRb SINE MIR 226 259 -9 6 1313 390 320 63 93 chr15 95477320 95477620 -8017354 + MLT1G3 LTR MaLR 83 373 -222 6 1313 256 247 20 70 chr15 95477664 95477764 -8017210 + MLT1G3 LTR MaLR 372 466 -23 6 1313 1152 82 0 0 chr15 95477967 95478114 -8016860 + B1_Mus1 SINE Alu 1 147 -1 6 1313 642 60 0 0 chr15 95478114 95478197 -8016777 + (GA)n Simple_repeat Simple_repeat 2 84 0 6 1313 600 14 0 0 chr15 95479387 95479456 -8015518 + (GGA)n Simple_repeat Simple_repeat 2 70 0 6 1313 352 294 19 71 chr15 95479479 95479633 -8015341 + B1F1 SINE Alu 3 148 -1 6 1313 668 214 61 14 chr15 95485669 95485834 -8009140 + B3A SINE B2 1 162 -31 6 1313 204 179 0 0 chr15 95485844 95485883 -8009091 + CT-rich Low_complexity Low_complexity 2 40 0 6 1313 195 100 0 0 chr15 95485969 95485999 -8008975 + (GGGAGA)n Simple_repeat Simple_repeat 6 35 0 6 1313 596 278 23 0 chr15 95486265 95486398 -8008576 + RSINE1 SINE B4 2 137 -28 6 1313 271 0 51 0 chr15 95486419 95486458 -8008516 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1313 187 295 66 0 chr15 95486742 95486803 -8008171 - L2c LINE L2 -45 3342 3278 6 1313 232 365 14 42 chr15 95487459 95487602 -8007372 + MER20 DNA MER1_type 6 144 -75 6 1313 316 224 23 12 chr15 95488156 95488242 -8006732 + MLT1A1 LTR MaLR 300 386 -22 6 1313 465 19 0 0 chr15 95488634 95488688 -8006286 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 1313 1087 49 13 53 chr15 95488737 95488880 -8006094 + B1_Mus2 SINE Alu 1 138 -9 6 1313 305 24 0 23 chr15 95488880 95488923 -8006051 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 6 1313 469 211 129 8 chr15 95489018 95489142 -8005832 - RMER15 LTR ERVL -34 541 403 6 1313 243 337 29 19 chr15 95489284 95489387 -8005587 - Lx8 LINE L1 -305 7168 7065 6 1313 216 0 0 0 chr15 95490276 95490300 -8004674 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 1313 1257 257 181 42 chr15 95491159 95491712 -8003262 + Lx8 LINE L1 6705 7334 -139 6 1313 964 139 6 6 chr15 95491712 95491885 -8003089 + GA-rich Low_complexity Low_complexity 2 174 0 6 1313 233 213 0 0 chr15 95491915 95491962 -8003012 + Lx8 LINE L1 7423 7469 -4 6 1313 4397 144 134 48 chr15 95492067 95492898 -8002076 + RMER19B LTR ERVK 1 902 0 6 1313 197 159 0 22 chr15 95493580 95493625 -8001349 + (TAA)n Simple_repeat Simple_repeat 1 44 0 6 1313 297 0 0 0 chr15 95494028 95494061 -8000913 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1313 192 40 0 0 chr15 95494492 95494517 -8000457 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 1313 266 216 186 17 chr15 95494533 95494651 -8000323 + L1MC5 LINE L1 7766 7903 -58 6 1313 897 156 263 0 chr15 95495801 95495980 -7998994 - URR1A DNA MER1_type 0 226 1 6 1313 324 0 0 0 chr15 95496337 95496373 -7998601 + (TTA)n Simple_repeat Simple_repeat 2 37 0 6 1313 351 0 0 0 chr15 95496398 95496437 -7998537 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1313 428 160 13 0 chr15 95496448 95496523 -7998451 - RSINE1 SINE B4 -34 131 56 6 1313 448 30 30 0 chr15 95496716 95496782 -7998192 + (TA)n Simple_repeat Simple_repeat 2 69 0 6 1313 649 273 134 0 chr15 95496782 95496998 -7997976 - MTE2a LTR MaLR -72 307 63 6 1313 930 193 113 5 chr15 95498293 95498496 -7996478 - URR1A DNA MER1_type -1 225 1 6 1313 276 53 0 0 chr15 95499096 95499134 -7995840 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1313 1043 218 84 54 chr15 95499134 95499423 -7995551 - MTD LTR MaLR -119 300 2 6 1313 539 208 10 0 chr15 95499440 95499541 -7995433 - L1_Mur3 LINE L1 -2046 3834 3733 7 1313 858 161 103 39 chr15 95499548 95499781 -7995193 - Lx7 LINE L1 0 7696 7449 7 1313 1202 150 61 0 chr15 95499787 95500000 -7994974 - L1_Mur3 LINE L1 -1906 3974 3749 7 1313 874 146 18 42 chr15 95500003 95500168 -7994806 - L1_Mur3 LINE L1 -2135 3745 3585 1 1313 14591 13 0 0 chr15 95500168 95501801 -7993173 + L1Md_T LINE L1 3954 5586 -297 2 1313 8582 34 0 0 chr15 95501801 95502796 -7992178 + L1Md_T LINE L1 5587 6581 -1 2 1313 11150 152 67 17 chr15 95502796 95502961 -7992013 - L1_Mur3 LINE L1 -2285 3595 3358 1 1313 729 63 0 0 chr15 95502961 95503056 -7991918 + (CATATA)n Simple_repeat Simple_repeat 2 96 0 3 1313 11150 152 67 17 chr15 95503056 95504323 -7990651 - L1_Mur3 LINE L1 -2523 3357 2080 1 1313 565 49 25 0 chr15 95504323 95504404 -7990570 + (TGG)n Simple_repeat Simple_repeat 3 85 0 4 1313 11150 152 67 17 chr15 95504404 95505191 -7989783 - L1_Mur3 LINE L1 -3801 2079 1265 1 1313 3562 182 52 50 chr15 95505189 95506014 -7988960 - L1_Mur3 LINE L1 -6626 1102 276 1 1313 387 0 0 0 chr15 95506540 95506583 -7988391 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 5 1313 2235 239 102 48 chr15 95507021 95507633 -7987341 + Lx9 LINE L1 6846 7459 -185 6 1313 351 0 0 0 chr15 95507633 95507672 -7987302 + (TA)n Simple_repeat Simple_repeat 2 40 0 7 1313 405 0 0 0 chr15 95507672 95507716 -7987258 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1313 2235 239 102 48 chr15 95507716 95507856 -7987118 + Lx9 LINE L1 7460 7639 -5 6 1313 663 199 22 0 chr15 95507987 95508123 -7986851 + B1F2 SINE Alu 3 141 -8 9 1313 216 0 0 0 chr15 95508124 95508148 -7986826 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 1 1313 213 39 0 0 chr15 95508299 95508325 -7986649 + (CCTG)n Simple_repeat Simple_repeat 1 26 0 1 1313 288 0 0 0 chr15 95508978 95509010 -7985964 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1313 708 271 0 18 chr15 95509362 95509536 -7985438 + B3A SINE B2 1 171 -45 1 1313 1158 123 0 0 chr15 95509536 95509715 -7985259 + (CA)n Simple_repeat Simple_repeat 1 181 -184 1 1313 1158 123 0 0 chr15 95509722 95509901 -7985073 + (CA)n Simple_repeat Simple_repeat 182 365 0 1 1313 588 284 9 74 chr15 95509901 95509935 -7985039 + B3 SINE B2 177 203 -13 1 1313 489 138 0 0 chr15 95509935 95510015 -7984959 + (CA)n Simple_repeat Simple_repeat 1 80 0 1 1313 324 319 0 0 chr15 95510595 95510686 -7984288 + MER44D DNA MER2_type 11 101 -604 1 1313 2481 155 38 57 chr15 95511189 95511278 -7983696 - RLTR20C LTR ERVK 0 534 446 1 1313 252 0 0 0 chr15 95511278 95511306 -7983668 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1313 2481 155 38 57 chr15 95511306 95511649 -7983325 - RLTR20C LTR ERVK -89 445 93 1 1313 2269 111 40 5 chr15 95511649 95512020 -7982954 + Lx2 LINE L1 6600 6983 -14 1 1313 2481 155 38 57 chr15 95512020 95512093 -7982881 - RLTR20C LTR ERVK -442 92 40 1 1313 660 254 47 112 chr15 95512398 95512977 -7981997 - RLTR19-int LTR ERVK -3181 2956 2583 2 1313 2354 99 38 14 chr15 95514108 95514477 -7980497 - MTB_Mm LTR MaLR -27 380 3 2 1313 5801 173 65 26 chr15 95514479 95515688 -7979286 - MTB_Mm-int LTR MaLR 0 1258 2 2 1313 1680 125 45 57 chr15 95515691 95516005 -7978969 - MTB_Mm LTR MaLR -8 399 90 2 1313 433 131 12 12 chr15 95516906 95516991 -7977983 + CT-rich Low_complexity Low_complexity 4 88 0 2 1313 7126 148 55 7 chr15 95516997 95517785 -7977189 - Lx4B LINE L1 -36 7022 6175 2 1313 225 0 0 0 chr15 95517785 95517810 -7977164 + (TCCCC)n Simple_repeat Simple_repeat 2 26 0 2 1313 7126 133 20 6 chr15 95517810 95518494 -7976480 - Lx4B LINE L1 -884 6174 5452 2 1313 4996 112 0 9 chr15 95518494 95519234 -7975740 + Lx4B LINE L1 4756 5488 -389 2 1313 907 330 45 38 chr15 95519524 95519554 -7975420 + RMER15-int LTR ERVL 4187 4211 -788 2 1313 1645 169 81 89 chr15 95519554 95519924 -7975050 - ORR1B2 LTR MaLR 0 367 1 2 1313 907 330 45 38 chr15 95519924 95520318 -7974656 + RMER15-int LTR ERVL 4212 4614 -385 2 1313 235 383 47 8 chr15 95520318 95520447 -7974527 - MLT1J LTR MaLR -273 239 106 2 1313 25 0 0 0 chr15 95520717 95520742 -7974232 + AT_rich Low_complexity Low_complexity 1 25 0 2 1313 195 42 0 0 chr15 95520854 95520878 -7974096 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 2 1313 312 330 18 0 chr15 95520925 95521034 -7973940 - PB1D7 SINE Alu -8 112 2 3 1313 198 122 0 0 chr15 95522442 95522465 -7972509 + (TTTTG)n Simple_repeat Simple_repeat 4 26 0 3 1313 237 65 0 0 chr15 95522465 95522496 -7972478 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1313 198 122 0 0 chr15 95522496 95522513 -7972461 + (TTTTG)n Simple_repeat Simple_repeat 2 18 0 3 1313 889 230 10 10 chr15 95523102 95523300 -7971674 + B3A SINE B2 1 198 0 3 1313 607 207 0 17 chr15 95523626 95523744 -7971230 + PB1D10 SINE Alu 1 116 -1 3 1313 352 209 128 103 chr15 95523970 95524087 -7970887 + PB1D7 SINE Alu 1 120 0 3 1313 584 225 0 0 chr15 95524555 95524675 -7970299 + B1F SINE Alu 2 121 -28 3 1313 1098 135 0 0 chr15 95524715 95524893 -7970081 + (GGA)n Simple_repeat Simple_repeat 3 180 0 3 1313 3009 258 136 15 chr15 95525122 95526107 -7968867 - Lx8 LINE L1 -29 7444 6341 3 1313 851 184 14 0 chr15 95526502 95526649 -7968325 - B1_Mur4 SINE Alu -1 149 1 4 1313 468 0 0 0 chr15 95527049 95527101 -7967873 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1313 981 222 44 15 chr15 95527418 95527624 -7967350 - B3 SINE B2 -3 213 2 4 1313 255 214 0 0 chr15 95528819 95528889 -7966085 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 1313 762 289 95 45 chr15 95529016 95529396 -7965578 - L1MB5 LINE L1 -40 6134 5736 4 1313 602 315 68 26 chr15 95529462 95529726 -7965248 - B4A SINE B4 -15 277 3 4 1313 234 231 0 0 chr15 95530169 95530221 -7964753 + G-rich Low_complexity Low_complexity 1 52 0 4 1313 204 40 0 0 chr15 95531000 95531025 -7963949 + (CCCCCA)n Simple_repeat Simple_repeat 5 29 0 4 1313 261 325 25 0 chr15 95531291 95531371 -7963603 - ID4_ SINE ID 0 83 2 4 1313 227 299 39 13 chr15 95531451 95531529 -7963445 - B1F SINE Alu -49 100 21 4 1313 1227 52 0 0 chr15 95533957 95534112 -7960862 + (GAA)n Simple_repeat Simple_repeat 2 156 0 5 1313 447 176 43 12 chr15 95535205 95535366 -7959608 + (CA)n Simple_repeat Simple_repeat 2 167 0 5 1313 255 309 39 56 chr15 95535424 95535602 -7959372 - L1MC1 LINE L1 -6 6327 6153 5 1313 304 236 104 39 chr15 95536199 95536353 -7958621 - Lx9 LINE L1 0 7644 7481 5 1313 351 209 25 25 chr15 95536369 95536526 -7958448 + (TATG)n Simple_repeat Simple_repeat 2 158 0 5 1313 219 239 0 29 chr15 95536534 95536603 -7958371 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 1313 448 294 11 22 chr15 95536600 95536781 -7958193 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 1313 961 223 151 55 chr15 95536796 95537110 -7957864 - MT2A LTR ERVL -50 534 127 5 1313 343 284 35 12 chr15 95537112 95537255 -7957719 - MLT1C LTR MaLR -319 148 2 5 1313 926 222 10 19 chr15 95537584 95537791 -7957183 - B3 SINE B2 -11 205 1 5 1313 390 74 0 0 chr15 95538346 95538400 -7956574 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1313 324 0 0 0 chr15 95538454 95538490 -7956484 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1313 703 270 105 38 chr15 95538868 95539238 -7955736 + L1MA8 LINE L1 5783 6177 -114 6 1313 19884 81 8 1 chr15 95539238 95542737 -7952237 + L1VL4 LINE L1 37 3559 0 6 1313 700 220 0 0 chr15 95542742 95542874 -7952100 - B3 SINE B2 -84 132 1 6 1313 738 128 0 0 chr15 95543355 95543472 -7951502 + (TA)n Simple_repeat Simple_repeat 2 118 0 6 1313 22 0 0 0 chr15 95543654 95543676 -7951298 + AT_rich Low_complexity Low_complexity 1 22 0 6 1313 564 269 8 8 chr15 95543810 95543941 -7951033 + B1_Mur1 SINE Alu 13 143 -6 6 1313 922 71 94 0 chr15 95543952 95544079 -7950895 + B1_Mus1 SINE Alu 2 140 -8 6 1313 288 0 0 0 chr15 95544080 95544112 -7950862 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6 1313 216 228 0 0 chr15 95544118 95544175 -7950799 + GA-rich Low_complexity Low_complexity 1 57 0 6 1313 368 305 24 63 chr15 95544186 95544312 -7950662 + ID_B1 SINE B4 96 216 -8 7 1313 28 86 0 0 chr15 95544401 95544471 -7950503 + AT_rich Low_complexity Low_complexity 1 70 0 7 1313 781 213 17 91 chr15 95545182 95545414 -7949560 + B3 SINE B2 2 216 0 7 1313 591 85 0 0 chr15 95547079 95547161 -7947813 + (GGAA)n Simple_repeat Simple_repeat 3 84 0 7 1313 1334 106 21 0 chr15 95547248 95547436 -7947538 + B2_Mm2 SINE B2 2 193 -2 7 1313 840 232 5 22 chr15 95548183 95548368 -7946606 + B3A SINE B2 1 182 -16 7 1313 231 273 15 15 chr15 95548805 95548811 -7946163 + (TGGA)n Simple_repeat Simple_repeat 3 8 0 7 1313 1211 46 29 0 chr15 95548811 95548985 -7945989 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 7 1313 231 273 15 15 chr15 95548985 95549045 -7945929 + (TGGA)n Simple_repeat Simple_repeat 1 61 0 7 1313 225 108 0 0 chr15 95549046 95549083 -7945891 + (GA)n Simple_repeat Simple_repeat 2 38 0 7 1313 846 99 24 18 chr15 95549096 95549260 -7945714 + (TAGA)n Simple_repeat Simple_repeat 3 167 0 8 1313 348 272 138 5 chr15 95549260 95549466 -7945508 + L1MA4 LINE L1 5800 6032 -268 8 1313 657 109 463 13 chr15 95549547 95549696 -7945278 + B3 SINE B2 1 216 0 8 1313 1046 208 189 13 chr15 95550374 95550520 -7944454 - ORR1D1 LTR MaLR -2 372 211 8 1313 198 0 0 0 chr15 95550520 95550542 -7944432 + (CAG)n Simple_repeat Simple_repeat 1 22 0 8 1313 1046 208 189 13 chr15 95550542 95550707 -7944267 - ORR1D1 LTR MaLR -164 210 6 8 1313 2931 106 5 2 chr15 95550978 95551403 -7943571 - L1_Mus4 LINE L1 -10 6626 6201 8 1314 1066 184 0 0 chr15 95551543 95551717 -7943257 + Lx7 LINE L1 5612 5785 -1911 8 1314 1117 58 29 0 chr15 95551727 95551864 -7943110 + B1_Mus1 SINE Alu 3 143 -5 8 1314 405 0 0 0 chr15 95551866 95551911 -7943063 + (GA)n Simple_repeat Simple_repeat 2 46 0 8 1314 3903 214 120 10 chr15 95551936 95552917 -7942057 + Lx7 LINE L1 6571 7659 -37 8 1314 579 240 0 16 chr15 95553848 95553975 -7940999 - B1_Mur2 SINE Alu -17 132 8 8 1314 360 148 0 0 chr15 95553999 95554060 -7940914 + (TA)n Simple_repeat Simple_repeat 1 61 0 9 1314 419 294 135 25 chr15 95554928 95555185 -7939789 + B4A SINE B4 1 284 -8 9 1314 739 220 21 78 chr15 95555718 95555910 -7939064 + B3A SINE B2 1 181 -17 9 1314 189 0 0 0 chr15 95555913 95555934 -7939040 + (CA)n Simple_repeat Simple_repeat 1 21 0 9 1314 576 0 0 0 chr15 95555934 95555998 -7938976 + (GA)n Simple_repeat Simple_repeat 2 65 0 9 1314 321 206 0 47 chr15 95556048 95556136 -7938838 - L1_Rod LINE L1 -3087 2760 2666 9 1314 21 0 0 0 chr15 95557709 95557730 -7937244 + AT_rich Low_complexity Low_complexity 1 21 0 9 1314 234 0 0 0 chr15 95557948 95557974 -7937000 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 9 1314 1266 182 87 14 chr15 95557980 95558269 -7936705 - Lx5 LINE L1 0 7050 6741 9 1314 230 184 0 0 chr15 95558692 95558730 -7936244 - L1M5 LINE L1 -426 5753 5716 9 1314 21 0 0 0 chr15 95558883 95558904 -7936070 + AT_rich Low_complexity Low_complexity 1 21 0 1 1314 39358 7 0 1 chr15 95558919 95564886 -7930088 + L1Md_A LINE L1 1 5586 -297 1 1314 9224 2 0 0 chr15 95564886 95565882 -7929092 + L1Md_A LINE L1 5587 6582 0 1 1314 4368 187 125 29 chr15 95566409 95567565 -7927409 - RMER12 LTR ERVK 0 1322 1 1 1314 1600 297 53 28 chr15 95567616 95568357 -7926617 + L1M2 LINE L1 4512 5270 -873 1 1314 471 306 46 60 chr15 95568343 95568648 -7926326 + L1M2 LINE L1 5377 5711 -468 1 1314 970 306 91 24 chr15 95568672 95569137 -7925837 + L1M2 LINE L1 4473 4958 -1185 1 1314 591 15 0 0 chr15 95569137 95569205 -7925769 + (TC)n Simple_repeat Simple_repeat 2 69 0 1 1314 234 0 0 0 chr15 95569205 95569230 -7925744 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1314 970 306 91 24 chr15 95569230 95569315 -7925659 + L1M2 LINE L1 4959 5060 -1083 1 1314 1312 45 17 11 chr15 95569354 95569533 -7925441 + B2_Mm2 SINE B2 8 187 -8 1 1314 278 225 10 110 chr15 95569554 95569654 -7925320 + MT2B LTR ERVL 150 239 -362 1 1314 694 209 29 0 chr15 95569575 95569714 -7925260 + B1_Mur1 SINE Alu 7 149 0 1 1314 836 69 0 8 chr15 95569735 95569852 -7925122 + (GGGA)n Simple_repeat Simple_repeat 2 117 0 1 1314 300 220 9 27 chr15 95569857 95569969 -7925005 + L1M2 LINE L1 5104 5213 -930 1 1314 352 174 22 0 chr15 95570026 95570118 -7924856 + (TG)n Simple_repeat Simple_repeat 2 95 0 1 1314 1642 216 45 3 chr15 95570185 95570565 -7924409 - MTD LTR MaLR -1 418 23 1 1314 219 250 37 12 chr15 95570910 95570991 -7923983 + (TAAAG)n Simple_repeat Simple_repeat 2 84 0 1 1314 215 176 70 12 chr15 95571066 95571278 -7923696 + (TATAA)n Simple_repeat Simple_repeat 1 224 0 1 1314 3046 186 52 5 chr15 95571282 95571903 -7923071 - Lx9 LINE L1 -145 7499 6850 1 1314 270 286 138 17 chr15 95572137 95572311 -7922663 + L2a LINE L2 3197 3391 -35 1 1314 22 56 0 0 chr15 95572536 95572572 -7922402 + AT_rich Low_complexity Low_complexity 1 36 0 1 1314 1943 149 7 84 chr15 95573514 95573919 -7921055 + ORR1B1 LTR MaLR 2 394 0 1 1314 418 259 77 31 chr15 95573934 95574148 -7920826 + MLT1A1 LTR MaLR 153 400 -8 1 1314 270 320 99 13 chr15 95574147 95574299 -7920675 + Charlie25 DNA MER1_type 147 311 -2213 1 1314 268 248 39 177 chr15 95574718 95574899 -7920075 + RMER15 LTR ERVL 5 160 -415 1 1314 686 237 112 41 chr15 95574893 95575135 -7919839 + RMER15 LTR ERVL 273 531 -44 1 1314 360 0 0 0 chr15 95576426 95576466 -7918508 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1314 181 250 23 0 chr15 95576589 95576633 -7918341 - MIRb SINE MIR -34 234 190 1 1314 270 0 0 0 chr15 95577516 95577546 -7917428 + (CTG)n Simple_repeat Simple_repeat 1 30 0 1 1314 1442 111 17 25 chr15 95578343 95578629 -7916345 + ORR1A4 LTR MaLR 93 394 0 1 1314 439 308 72 80 chr15 95578640 95579002 -7915972 + ORR1E LTR MaLR 1 375 -4 1 1314 318 353 29 17 chr15 95579450 95579623 -7915351 + L4 LINE RTE 1646 1820 -209 1 1314 228 333 50 17 chr15 95580588 95580707 -7914267 - L2b LINE L2 -20 3355 3233 1 1314 492 285 135 60 chr15 95580761 95581251 -7913723 + MER34 LTR ERV1 11 571 0 1 1314 207 286 42 14 chr15 95581252 95581323 -7913651 + L2a LINE L2 3313 3385 -41 1 1314 346 241 38 0 chr15 95581908 95581987 -7912987 + PB1D7 SINE Alu 27 108 -12 1 1314 765 169 0 0 chr15 95582069 95582342 -7912632 + (CA)n Simple_repeat Simple_repeat 1 273 0 1 1314 269 145 0 16 chr15 95582359 95582422 -7912552 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 1314 708 173 6 11 chr15 95582452 95582633 -7912341 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1314 2427 99 72 18 chr15 95583746 95584136 -7910838 + IAPLTR2a LTR ERVK 1 411 0 1 1314 509 264 26 45 chr15 95584224 95584379 -7910595 - Lx9 LINE L1 -313 7331 7180 1 1314 6345 70 0 0 chr15 95584722 95585528 -7909446 - L1_Mm LINE L1 -625 5258 4453 1 1314 298 71 0 0 chr15 95585524 95585566 -7909408 + L1_Mm LINE L1 5247 5288 -595 1 1314 2808 45 0 0 chr15 95585566 95585901 -7909073 + L1Md_F2 LINE L1 5252 5586 -297 1 1314 8422 38 1 2 chr15 95585901 95586898 -7908076 + L1Md_F2 LINE L1 5587 6582 0 1 1314 851 277 19 0 chr15 95588222 95588428 -7906546 + B3 SINE B2 4 213 -3 1 1314 721 199 14 14 chr15 95589029 95589177 -7905797 + B1_Mus1 SINE Alu 1 148 0 1 1314 332 161 0 0 chr15 95590171 95590233 -7904741 + MLT1A1 LTR MaLR 347 408 0 1 1314 592 256 87 19 chr15 95590298 95590505 -7904469 + L1MA6 LINE L1 6072 6292 -8 1 1314 843 105 0 0 chr15 95591639 95591763 -7903211 + (GGAA)n Simple_repeat Simple_repeat 1 124 0 1 1314 499 318 33 33 chr15 95592309 95592585 -7902389 + Tigger7 DNA MER2_type 2206 2481 -10 1 1314 1309 164 14 0 chr15 95592870 95593089 -7901885 + URR1A DNA MER1_type 5 226 0 1 1314 1263 78 4 0 chr15 95593630 95593886 -7901088 + (TC)n Simple_repeat Simple_repeat 1 256 0 1 1314 32 26 0 0 chr15 95594193 95594232 -7900742 + AT_rich Low_complexity Low_complexity 1 39 0 1 1314 387 0 0 0 chr15 95594558 95594601 -7900373 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1314 624 204 0 0 chr15 95594601 95594709 -7900265 - B1F2 SINE Alu -10 139 32 1 1314 321 273 26 32 chr15 95594961 95595116 -7899858 + GA-rich Low_complexity Low_complexity 2 155 0 1 1314 555 213 16 0 chr15 95595289 95595416 -7899558 + RSINE1 SINE B4 2 130 -35 1 1314 26 30 0 0 chr15 95596063 95596096 -7898878 + AT_rich Low_complexity Low_complexity 1 33 0 1 1314 266 295 47 9 chr15 95596357 95596463 -7898511 + MLT1A1 LTR MaLR 24 133 -275 1 1314 533 28 0 14 chr15 95596803 95596875 -7898099 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 1314 486 0 0 0 chr15 95597329 95597383 -7897591 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 1314 1395 69 16 31 chr15 95597661 95597855 -7897119 - B2_Mm1a SINE B2 -2 191 1 1 1314 323 311 34 0 chr15 95598977 95599096 -7895878 + L1MA7 LINE L1 2337 2459 -4390 1 1314 820 294 83 81 chr15 95599502 95599957 -7895017 - MT2A LTR ERVL -71 462 7 1 1314 1064 282 46 36 chr15 95600267 95600670 -7894304 - MTE2a LTR MaLR -17 402 7 1 1314 453 248 93 46 chr15 95600747 95600963 -7894011 + L1MA7 LINE L1 5461 5686 -1159 1 1314 414 324 66 0 chr15 95600965 95601101 -7893873 + B3A SINE B2 8 152 -46 1 1314 480 18 0 0 chr15 95601120 95601177 -7893797 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 1314 243 88 0 0 chr15 95601182 95601216 -7893758 + (GA)n Simple_repeat Simple_repeat 1 34 0 1 1314 597 312 54 46 chr15 95601239 95601737 -7893237 + L1MA7 LINE L1 5623 6193 -953 1 1314 647 278 13 7 chr15 95601741 95601893 -7893081 + RSINE1 SINE B4 10 162 -3 1 1314 585 325 65 44 chr15 95602012 95602424 -7892550 + L1MA7 LINE L1 6182 6602 -391 1 1314 1521 203 99 5 chr15 95602889 95603261 -7891713 - MTD LTR MaLR 0 419 13 1 1314 246 62 0 0 chr15 95603838 95603870 -7891104 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1314 1061 207 9 24 chr15 95604025 95604238 -7890736 - B3 SINE B2 -5 211 2 1 1314 2460 176 77 16 chr15 95605581 95606078 -7888896 - RLTR11A2 LTR ERVK 0 527 1 1 1314 761 308 132 25 chr15 95606975 95607301 -7887673 - MTE-int LTR MaLR -306 1274 914 1 1314 3693 166 128 12 chr15 95607523 95608321 -7886653 - RMER19B LTR ERVK -12 890 1 1 1314 550 186 490 0 chr15 95609932 95610077 -7884897 + B3 SINE B2 1 216 0 1 1314 222 258 182 0 chr15 95610210 95610276 -7884698 + ID4 SINE ID 1 78 -5 1 1314 2576 75 12 0 chr15 95610354 95610676 -7884298 - ORR1A3 LTR MaLR 0 326 1 1 1314 267 185 0 18 chr15 95610789 95610844 -7884130 - MTEa LTR MaLR -38 341 288 1 1314 304 346 56 25 chr15 95611357 95611517 -7883457 - MTEa LTR MaLR -162 217 53 1 1314 22 0 0 0 chr15 95611629 95611651 -7883323 + AT_rich Low_complexity Low_complexity 1 22 0 1 1314 1163 183 18 32 chr15 95611820 95611888 -7883086 - ORR1D2 LTR MaLR -23 398 285 1 1314 2146 173 131 41 chr15 95611888 95612377 -7882597 - MT2A LTR ERVL 0 533 1 1 1314 1163 269 59 50 chr15 95612377 95612652 -7882322 - ORR1D2 LTR MaLR -86 284 1 1 1314 201 39 0 0 chr15 95613561 95613587 -7881387 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1314 409 235 0 45 chr15 95613641 95613730 -7881244 + PB1D7 SINE Alu 1 85 -35 1 1314 400 243 265 0 chr15 95613778 95613818 -7881156 - MT2A LTR ERVL -7 594 553 1 1314 600 40 0 0 chr15 95613818 95613893 -7881081 + (TC)n Simple_repeat Simple_repeat 2 76 0 1 1314 400 243 265 0 chr15 95613893 95613988 -7880986 - MT2A LTR ERVL -49 552 424 1 1314 321 47 0 0 chr15 95613993 95614036 -7880938 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 1314 1270 27 7 0 chr15 95614048 95614194 -7880780 - B1_Mus1 SINE Alu 0 148 2 1 1314 541 108 0 0 chr15 95614200 95614274 -7880700 - B2_Mm2 SINE B2 -121 74 1 1 1314 1230 71 58 32 chr15 95614294 95614483 -7880491 - B2_Mm2 SINE B2 0 195 2 1 1314 451 209 56 150 chr15 95614483 95614658 -7880316 - MT2A LTR ERVL -165 436 279 1 1314 255 324 42 0 chr15 95614630 95614701 -7880273 - MT2A LTR ERVL -471 130 57 1 1314 507 197 129 16 chr15 95614669 95614793 -7880181 - MT2A LTR ERVL -394 139 2 1 1314 1056 229 63 60 chr15 95614818 95615134 -7879840 - ORR1D2 LTR MaLR -53 317 1 1 1314 693 272 84 34 chr15 95615265 95615528 -7879446 + L1M2 LINE L1 4788 5063 -1080 1 1314 402 275 166 29 chr15 95615506 95615783 -7879191 + L1M2 LINE L1 5317 5631 -669 1 1314 417 254 79 7 chr15 95615863 95616002 -7878972 + B1F SINE Alu 1 149 0 1 1314 234 279 25 25 chr15 95616070 95616151 -7878823 + L1M2 LINE L1 5836 5916 -252 1 1314 1899 151 31 61 chr15 95616256 95616630 -7878344 + ORR1A0 LTR MaLR 1 338 -8 1 1314 297 0 0 0 chr15 95616769 95616802 -7878172 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1314 237 333 31 31 chr15 95617214 95617310 -7877664 + L2a LINE L2 3042 3137 -289 1 1314 350 279 124 72 chr15 95617676 95618053 -7876921 + RMER15 LTR ERVL 6 500 -75 1 1314 423 205 92 59 chr15 95618176 95618295 -7876679 + B3A SINE B2 76 198 0 1 1314 30 0 0 0 chr15 95618297 95618327 -7876647 + AT_rich Low_complexity Low_complexity 1 30 0 1 1314 254 231 0 0 chr15 95618772 95618837 -7876137 - MER45R DNA Tip100 -1421 160 96 1 1314 925 142 15 0 chr15 95618847 95618981 -7875993 + B1_Mur4 SINE Alu 5 140 -10 1 1314 203 171 0 0 chr15 95618995 95619030 -7875944 + GA-rich Low_complexity Low_complexity 2 36 0 1 1314 226 353 81 23 chr15 95619033 95619120 -7875854 - MER45R DNA Tip100 -1483 98 8 1 1314 186 304 183 19 chr15 95619138 95619242 -7875732 - L2 LINE L2 -1094 2325 2205 1 1314 228 185 18 18 chr15 95621294 95621349 -7873625 + (CGGAG)n Simple_repeat Simple_repeat 2 56 0 1 1314 204 67 0 0 chr15 95621356 95621386 -7873588 + (CCGAG)n Simple_repeat Simple_repeat 1 30 0 1 1314 201 132 0 0 chr15 95623358 95623396 -7871578 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1314 441 207 27 182 chr15 95623598 95623746 -7871228 + RSINE1 SINE B4 3 127 -38 1 1314 382 301 98 43 chr15 95625090 95625283 -7869691 - ID_B1 SINE B4 -43 249 46 2 1314 231 88 0 0 chr15 95626829 95626863 -7868111 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1314 1235 48 0 7 chr15 95626873 95627021 -7867953 - B1_Mus1 SINE Alu -1 147 1 2 1314 204 40 0 0 chr15 95627662 95627687 -7867287 + (GGAAA)n Simple_repeat Simple_repeat 4 28 0 2 1314 417 20 0 0 chr15 95628014 95628064 -7866910 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1314 2268 148 8 14 chr15 95628708 95629077 -7865897 + ORR1B2 LTR MaLR 1 367 0 2 1314 204 289 205 60 chr15 95629913 95630079 -7864895 + MIRb SINE MIR 35 224 -44 2 1314 950 276 152 71 chr15 95630632 95631213 -7863761 - Lx8 LINE L1 -20 7453 6826 2 1314 1018 47 8 0 chr15 95631305 95631434 -7863540 - B1_Mus2 SINE Alu 0 147 18 2 1314 219 339 84 103 chr15 95632531 95632745 -7862229 - L2b LINE L2 -6 3381 3172 2 1314 237 211 0 0 chr15 95634255 95634312 -7860662 + T-rich Low_complexity Low_complexity 1 57 0 2 1314 24 0 0 0 chr15 95636138 95636162 -7858812 + AT_rich Low_complexity Low_complexity 1 24 0 2 1314 873 241 19 96 chr15 95636308 95636342 -7858632 - MTE2a LTR MaLR -10 369 342 2 1314 1385 68 21 21 chr15 95636342 95636536 -7858438 + B2_Mm2 SINE B2 1 194 -1 2 1314 873 241 19 96 chr15 95636536 95636762 -7858212 - MTE2a LTR MaLR -38 341 129 2 1314 567 193 62 156 chr15 95636800 95636960 -7858014 - MTE2a LTR MaLR -231 148 4 2 1314 551 298 159 70 chr15 95637046 95637360 -7857614 - MER2 DNA MER2_type -3 342 1 2 1314 473 222 0 0 chr15 95637680 95637770 -7857204 - PB1D10 SINE Alu -6 111 22 2 1314 1483 67 10 0 chr15 95637925 95638118 -7856856 - B2_Mm2 SINE B2 0 195 1 2 1314 206 279 0 0 chr15 95638451 95638494 -7856480 + C-rich Low_complexity Low_complexity 5 47 0 2 1314 239 216 20 0 chr15 95638775 95638826 -7856148 + Lx8 LINE L1 6722 6773 -700 2 1314 1153 305 108 23 chr15 95638879 95638964 -7856010 + Lx8 LINE L1 6864 6952 -521 2 1314 387 0 0 0 chr15 95638964 95639007 -7855967 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1314 1153 305 108 23 chr15 95639007 95639478 -7855496 + Lx8 LINE L1 6953 7466 -7 2 1314 194 315 0 0 chr15 95640099 95640153 -7854821 + MIRb SINE MIR 177 230 -38 2 1314 468 302 50 0 chr15 95641230 95641369 -7853605 - MLT1A LTR MaLR -224 150 5 2 1314 576 252 28 14 chr15 95641470 95641611 -7853363 - ID_B1 SINE B4 -1 223 81 2 1314 2056 101 30 57 chr15 95642080 95642416 -7852558 + ORR1A2 LTR MaLR 1 327 0 2 1314 331 149 141 51 chr15 95643326 95643404 -7851570 + RMER20B LTR ERVK 180 264 -363 2 1314 325 286 102 73 chr15 95643666 95643976 -7850998 - ORR1E LTR MaLR -29 341 24 2 1314 311 378 87 14 chr15 95646633 95646840 -7848134 - MIR SINE MIR -28 234 13 2 1314 231 215 0 0 chr15 95646934 95646999 -7847975 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 1314 231 36 0 0 chr15 95647060 95647088 -7847886 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2 1314 390 283 20 33 chr15 95647098 95647248 -7847726 - RSINE1 SINE B4 -14 151 4 2 1314 288 293 109 20 chr15 95647349 95647450 -7847524 - PB1D10 SINE Alu -5 112 3 2 1314 364 248 72 18 chr15 95648225 95648336 -7846638 + PB1D10 SINE Alu 1 117 0 2 1314 435 173 0 0 chr15 95648606 95648687 -7846287 + (CA)n Simple_repeat Simple_repeat 1 81 0 2 1314 350 118 0 42 chr15 95649475 95649510 -7845464 + A-rich Low_complexity Low_complexity 1 33 0 2 1314 1145 82 0 0 chr15 95649510 95649657 -7845317 + B1_Mus2 SINE Alu 1 147 0 2 1314 350 118 0 42 chr15 95649657 95649692 -7845282 + A-rich Low_complexity Low_complexity 34 68 0 2 1314 1369 226 136 122 chr15 95649851 95650381 -7844593 + RMER17B LTR ERVK 1 497 -409 2 1314 1232 48 0 20 chr15 95650381 95650531 -7844443 + B1_Mus2 SINE Alu 1 147 0 2 1314 1369 197 162 105 chr15 95650531 95650866 -7844108 + RMER17B LTR ERVK 448 811 -147 2 1314 21 36 0 0 chr15 95651536 95651564 -7843410 + AT_rich Low_complexity Low_complexity 1 28 0 2 1314 376 120 53 0 chr15 95651582 95651657 -7843317 + GA-rich Low_complexity Low_complexity 3 81 0 2 1314 2413 81 3 0 chr15 95651736 95652057 -7842917 + ORR1A2 LTR MaLR 1 322 -5 2 1314 1362 31 0 0 chr15 95652889 95653049 -7841925 + B2_Mm1t SINE B2 1 160 -33 2 1314 225 0 0 0 chr15 95653049 95653074 -7841900 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 2 1314 196 30 61 0 chr15 95653394 95653427 -7841547 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2 1314 213 196 0 0 chr15 95653447 95653498 -7841476 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1314 1121 166 102 0 chr15 95654019 95654224 -7840750 + URR1A DNA MER1_type 1 226 0 2 1314 216 0 0 0 chr15 95655010 95655034 -7839940 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 1314 349 224 174 7 chr15 95655957 95656101 -7838873 - L1MB4 LINE L1 0 6180 6013 2 1314 954 198 57 34 chr15 95656257 95656466 -7838508 + B3 SINE B2 2 215 -1 2 1314 558 315 122 27 chr15 95658103 95658439 -7836535 - MLT1B LTR MaLR -2 388 21 2 1314 452 124 0 37 chr15 95658771 95658880 -7836094 + (TG)n Simple_repeat Simple_repeat 1 105 0 2 1314 349 177 0 52 chr15 95658949 95659104 -7835870 + (TG)n Simple_repeat Simple_repeat 1 147 0 2 1314 354 305 100 38 chr15 95660528 95660688 -7834286 - MER5B DNA MER1_type 0 178 9 2 1314 330 270 70 26 chr15 95660908 95661022 -7833952 - MIR3 SINE MIR -78 130 12 2 1314 378 0 0 0 chr15 95662499 95662541 -7832433 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1314 220 260 20 20 chr15 95662556 95662607 -7832367 - MIRc SINE MIR -196 72 22 2 1314 800 251 112 0 chr15 95662737 95662996 -7831978 + L1MA9 LINE L1 5502 5789 -523 2 1314 373 271 16 38 chr15 95663018 95663202 -7831772 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 2 1314 195 129 0 0 chr15 95663221 95663252 -7831722 + (TATG)n Simple_repeat Simple_repeat 2 32 0 2 1314 859 224 103 8 chr15 95663267 95663528 -7831446 + L1MA9 LINE L1 5798 6083 -229 2 1314 1427 102 127 0 chr15 95664752 95664997 -7829977 - Lx2 LINE L1 0 6997 6722 2 1314 245 338 12 0 chr15 95665671 95665751 -7829223 - BC1_Mm scRNA scRNA -57 95 15 2 1314 398 267 108 29 chr15 95665776 95665915 -7829059 - B3 SINE B2 0 216 67 2 1314 623 317 84 24 chr15 95665921 95666347 -7828627 - HAL1 LINE L1 -169 2338 1887 2 1314 397 263 58 100 chr15 95666719 95666743 -7828231 - B4 SINE B4 -46 246 174 2 1314 564 151 80 115 chr15 95666743 95666799 -7828175 - B1_Mur1 SINE Alu 0 149 92 2 1314 824 203 98 5 chr15 95666799 95667002 -7827972 - URR1A DNA MER1_type 0 226 5 2 1314 564 148 49 122 chr15 95667002 95667089 -7827885 - B1_Mur1 SINE Alu -57 92 2 2 1314 397 263 58 100 chr15 95667089 95667111 -7827863 - B4 SINE B4 -119 173 65 2 1314 189 178 0 0 chr15 95669337 95669382 -7825592 + A-rich Low_complexity Low_complexity 1 45 0 2 1314 3582 89 55 56 chr15 95669526 95670094 -7824880 - RMER2 LTR ERV1 0 567 1 2 1314 351 0 0 0 chr15 95670245 95670284 -7824690 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1314 351 260 188 55 chr15 95670314 95670380 -7824594 - B4A SINE B4 -2 290 214 2 1314 225 0 0 0 chr15 95670380 95670405 -7824569 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2 1314 351 260 188 55 chr15 95670405 95670594 -7824380 - B4A SINE B4 -79 213 1 2 1314 726 259 83 55 chr15 95671233 95671523 -7823451 - L1MA4 LINE L1 -313 5987 5690 2 1314 338 286 0 75 chr15 95671635 95671741 -7823233 - ID_B1 SINE B4 -48 176 79 2 1314 721 222 167 39 chr15 95671937 95671976 -7822998 - Lx7 LINE L1 0 7696 7660 2 1314 1120 73 0 0 chr15 95671976 95672112 -7822862 + B1_Mus1 SINE Alu 3 138 -10 2 1314 207 0 0 0 chr15 95672112 95672135 -7822839 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2 1314 721 222 167 39 chr15 95672135 95672240 -7822734 - Lx7 LINE L1 -37 7659 7560 2 1314 1404 58 26 11 chr15 95672240 95672430 -7822544 + B2_Mm2 SINE B2 3 195 0 2 1314 721 222 167 39 chr15 95672430 95672672 -7822302 - Lx7 LINE L1 -137 7559 7260 2 1314 190 370 18 9 chr15 95672767 95672876 -7822098 - L2 LINE L2 -556 2863 2754 2 1314 292 260 40 0 chr15 95673264 95673394 -7821580 + PB1D10 SINE Alu 4 144 -3 2 1314 336 216 0 0 chr15 95673611 95673708 -7821266 + CT-rich Low_complexity Low_complexity 4 100 0 2 1314 207 0 0 0 chr15 95673711 95673734 -7821240 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 2 1314 228 294 14 29 chr15 95673744 95673814 -7821160 - ID4 SINE ID -13 70 2 2 1314 180 0 0 0 chr15 95674395 95674415 -7820559 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1314 3076 65 2 45 chr15 95674535 95674953 -7820021 + MTB LTR MaLR 1 400 0 2 1314 4543 78 31 2 chr15 95675615 95676219 -7818755 + L1_Mus4 LINE L1 6005 6626 -10 2 1314 1737 288 146 34 chr15 95676271 95677073 -7817901 - Lx8 LINE L1 -386 7087 6196 2 1314 180 27 53 26 chr15 95677130 95677168 -7817806 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 2 1314 521 138 11 0 chr15 95677288 95677382 -7817592 + (TC)n Simple_repeat Simple_repeat 1 95 0 2 1314 276 143 43 0 chr15 95677446 95677516 -7817458 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 2 1314 210 71 0 0 chr15 95677539 95677567 -7817407 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 2 1314 330 229 121 0 chr15 95678013 95678096 -7816878 + PB1 SINE Alu 33 125 -2 2 1314 224 231 0 0 chr15 95678118 95678157 -7816817 + ID4 SINE ID 22 60 -23 2 1314 211 333 103 17 chr15 95678157 95678225 -7816749 + ID_B1 SINE B4 28 140 -84 2 1314 656 154 0 8 chr15 95678225 95678349 -7816625 + GA-rich Low_complexity Low_complexity 1 123 0 2 1314 291 39 19 56 chr15 95678349 95678403 -7816571 + (GGA)n Simple_repeat Simple_repeat 2 53 0 2 1314 340 339 118 15 chr15 95679818 95680013 -7814961 - MIRb SINE MIR -15 253 39 2 1314 991 241 105 20 chr15 95680770 95681259 -7813715 - L1MB3 LINE L1 -5 6178 5638 2 1314 3428 38 10 0 chr15 95681408 95681804 -7813170 + MTB LTR MaLR 1 400 0 2 1315 242 239 116 99 chr15 95682573 95682754 -7812220 + L1MB4 LINE L1 351 534 -6013 2 1315 219 231 0 37 chr15 95683027 95683081 -7811893 + PB1D9 SINE Alu 8 59 -61 3 1315 349 183 0 30 chr15 95683091 95683226 -7811748 + GA-rich Low_complexity Low_complexity 3 133 0 3 1315 444 180 0 35 chr15 95683241 95683414 -7811560 + GA-rich Low_complexity Low_complexity 3 169 0 3 1315 397 141 0 82 chr15 95683429 95683623 -7811351 + GA-rich Low_complexity Low_complexity 3 180 0 3 1315 427 228 23 69 chr15 95683632 95683806 -7811168 + (CAGAGA)n Simple_repeat Simple_repeat 2 167 0 3 1315 438 197 0 110 chr15 95683747 95684074 -7810900 + GA-rich Low_complexity Low_complexity 1 291 0 3 1315 310 276 57 38 chr15 95683966 95684124 -7810850 - SUBTEL_sa Satellite Satellite -11 163 3 3 1315 337 274 0 58 chr15 95684157 95684347 -7810627 + G-rich Low_complexity Low_complexity 1 179 0 3 1315 488 99 259 0 chr15 95684397 95684478 -7810496 + B1_Mur4 SINE Alu 43 144 -6 3 1315 869 297 127 24 chr15 95684553 95685153 -7809821 + L1MB4 LINE L1 5216 5883 -699 2 1315 351 113 0 0 chr15 95685153 95685206 -7809768 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1315 670 318 143 31 chr15 95685206 95685566 -7809408 + L1MB4 LINE L1 5884 6305 -273 2 1315 927 186 122 5 chr15 95685566 95685755 -7809219 + B3 SINE B2 3 213 -3 3 1315 670 329 150 16 chr15 95685755 95685971 -7809003 + L1MB4 LINE L1 6306 6538 -40 2 1315 1309 210 128 59 chr15 95686588 95686978 -7807996 - MTD LTR MaLR -2 417 1 3 1315 519 17 0 0 chr15 95686995 95687055 -7807919 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 1315 3357 251 87 67 chr15 95687056 95688241 -7806733 - MTD-int LTR MaLR -33 1225 17 3 1315 331 185 3 57 chr15 95688617 95688708 -7806266 - B1F2 SINE Alu -230 84 1 3 1315 286 226 0 0 chr15 95688653 95688715 -7806259 - B4A SINE B4 -151 141 80 3 1315 507 232 205 12 chr15 95689135 95689301 -7805673 - B3 SINE B2 -18 198 1 3 1315 351 225 24 24 chr15 95689485 95689567 -7805407 - ID4 SINE ID 0 83 2 3 1315 1032 227 29 5 chr15 95690298 95690506 -7804468 - B3 SINE B2 0 216 4 3 1315 1110 150 125 0 chr15 95691775 95691975 -7802999 - URR1A DNA MER1_type 0 226 2 3 1315 495 0 0 0 chr15 95692357 95692412 -7802562 + (TTTTA)n Simple_repeat Simple_repeat 1 55 0 3 1315 3119 146 3 80 chr15 95693062 95693666 -7801308 - Lx LINE L1 -1 6653 6096 3 1315 751 106 15 24 chr15 95693666 95693803 -7801171 - Lx LINE L1 -1091 5906 5807 3 1315 322 248 98 51 chr15 95693976 95694321 -7800653 + MER33 DNA MER1_type 12 312 -12 3 1315 204 128 0 0 chr15 95695495 95695513 -7799461 + (TG)n Simple_repeat Simple_repeat 2 19 0 3 1315 459 0 0 0 chr15 95695513 95695564 -7799410 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 1315 204 128 0 0 chr15 95695564 95695584 -7799390 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 1315 231 250 0 0 chr15 95696526 95696574 -7798400 + LTR45 LTR ERV1 30 77 -448 3 1315 732 263 138 72 chr15 95696595 95696972 -7798002 + MTB_Mm LTR MaLR 1 402 -5 3 1315 645 173 5 32 chr15 95697061 95697246 -7797728 + (TATG)n Simple_repeat Simple_repeat 1 180 0 3 1315 702 141 36 10 chr15 95697272 95697584 -7797390 + (TATG)n Simple_repeat Simple_repeat 1 320 0 3 1315 236 235 8 25 chr15 95697581 95697699 -7797275 + (TATATG)n Simple_repeat Simple_repeat 2 117 0 3 1315 844 248 65 43 chr15 95697699 95697977 -7796997 - Lx8 LINE L1 -21 7452 7169 3 1315 1353 92 60 0 chr15 95699223 95699407 -7795567 + B2_Mm2 SINE B2 1 195 0 3 1315 408 302 13 86 chr15 95699442 95699594 -7795380 - RSINE1 SINE B4 -16 149 9 3 1315 593 294 0 0 chr15 95699833 95699969 -7795005 + RSINE1 SINE B4 1 136 -29 3 1315 1134 214 199 10 chr15 95700787 95701094 -7793880 + ORR1D1 LTR MaLR 10 374 0 3 1315 238 340 206 15 chr15 95701196 95701371 -7793603 - L2a LINE L2 -4 3422 3205 3 1315 269 89 0 22 chr15 95701371 95701417 -7793557 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1315 238 323 303 12 chr15 95701417 95701698 -7793276 - L2a LINE L2 -222 3204 2851 3 1315 281 330 23 0 chr15 95701821 95701909 -7793065 + RMER30 DNA MER1_type 2 91 -111 3 1315 240 111 0 0 chr15 95701909 95701945 -7793029 + (GA)n Simple_repeat Simple_repeat 1 36 0 3 1315 258 105 0 0 chr15 95701937 95701975 -7792999 + (GGA)n Simple_repeat Simple_repeat 2 39 0 3 1315 369 264 18 9 chr15 95702523 95702634 -7792340 + PB1D10 SINE Alu 1 112 -5 3 1315 253 300 0 0 chr15 95702640 95702710 -7792264 + tRNA-Ala-GCY_ tRNA tRNA 1 70 -5 3 1315 243 88 0 0 chr15 95702773 95702807 -7792167 + (ATTG)n Simple_repeat Simple_repeat 3 36 0 3 1315 224 214 89 0 chr15 95703005 95703061 -7791913 + PB1D7 SINE Alu 19 79 -41 3 1315 21 0 0 0 chr15 95703465 95703486 -7791488 + AT_rich Low_complexity Low_complexity 1 21 0 3 1315 1452 44 0 0 chr15 95704039 95704219 -7790755 + (TCCCC)n Simple_repeat Simple_repeat 1 180 0 3 1315 23 33 0 0 chr15 95704249 95704279 -7790695 + AT_rich Low_complexity Low_complexity 1 30 0 3 1315 572 244 0 186 chr15 95704303 95704529 -7790445 - B3A SINE B2 -13 203 20 3 1315 1200 63 0 0 chr15 95704546 95704689 -7790285 - B1_Mus2 SINE Alu 0 147 5 3 1315 21 57 0 0 chr15 95705690 95705725 -7789249 + AT_rich Low_complexity Low_complexity 1 35 0 3 1315 414 255 17 52 chr15 95706175 95706291 -7788683 - PB1D10 SINE Alu 0 117 6 3 1315 2137 164 107 39 chr15 95706781 95707275 -7787699 - RLTR11A LTR ERVK 0 528 1 3 1315 242 291 115 42 chr15 95708253 95708418 -7786556 - L2a LINE L2 -1 3425 3249 3 1315 212 330 0 82 chr15 95708577 95708699 -7786275 + PB1D10 SINE Alu 5 116 -1 3 1315 237 276 107 62 chr15 95709147 95709371 -7785603 - Charlie1a DNA MER1_type -98 1357 1124 3 1315 480 317 180 45 chr15 95709374 95709797 -7785177 - Charlie1a DNA MER1_type -639 816 337 3 1315 3277 34 40 0 chr15 95709919 95710298 -7784676 - MTA_Mm LTR MaLR 0 396 3 3 1315 1030 187 65 5 chr15 95710316 95710515 -7784459 - B3 SINE B2 -4 212 2 3 1315 287 317 78 62 chr15 95710516 95710644 -7784330 - Charlie1a DNA MER1_type -1298 157 28 3 1315 419 335 21 24 chr15 95711458 95711656 -7783318 + B3A SINE B2 16 216 0 3 1315 365 122 14 0 chr15 95711998 95712072 -7782902 + (GA)n Simple_repeat Simple_repeat 1 75 0 3 1315 204 291 0 35 chr15 95712281 95712338 -7782636 - MIR3 SINE MIR -139 69 15 3 1315 590 239 6 0 chr15 95712473 95712649 -7782325 + (TA)n Simple_repeat Simple_repeat 1 177 0 3 1315 267 203 0 0 chr15 95712648 95712707 -7782267 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 1315 241 283 0 0 chr15 95712877 95712937 -7782037 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 1315 677 247 46 0 chr15 95712939 95713113 -7781861 - B3A SINE B2 -15 183 2 3 1315 3174 84 8 46 chr15 95713339 95713813 -7781161 + Lx LINE L1 6196 6651 -3 3 1315 3320 24 39 0 chr15 95714418 95714799 -7780175 - MTA_Mm LTR MaLR 0 396 1 3 1315 423 52 0 0 chr15 95715379 95715437 -7779537 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 1315 252 0 0 0 chr15 95715437 95715465 -7779509 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1315 513 296 82 23 chr15 95717125 95717381 -7777593 + L1M5 LINE L1 5523 5793 -331 3 1315 305 261 78 70 chr15 95717504 95717632 -7777342 + HAL1b LINE L1 1869 1997 -12 3 1315 279 0 0 0 chr15 95718357 95718388 -7776586 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1315 369 0 0 0 chr15 95718388 95718428 -7776546 + (GA)n Simple_repeat Simple_repeat 1 41 0 3 1315 22 35 0 0 chr15 95718593 95718622 -7776352 + AT_rich Low_complexity Low_complexity 1 29 0 3 1315 802 267 108 56 chr15 95719595 95719881 -7775093 - Lx8 LINE L1 -312 7161 6861 3 1315 843 206 0 0 chr15 95719883 95720063 -7774911 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 1315 655 239 30 55 chr15 95720168 95720332 -7774642 - ORR1D1 LTR MaLR 0 374 215 3 1315 586 183 12 19 chr15 95720476 95720632 -7774342 - ORR1D1 LTR MaLR -255 139 1 3 1315 511 302 139 14 chr15 95720648 95720856 -7774118 - Lx8 LINE L1 -179 7294 7061 3 1315 371 164 0 0 chr15 95720897 95720958 -7774016 - URR1B DNA MER1_type -4 221 161 3 1315 1184 82 0 6 chr15 95721699 95721870 -7773104 + (TTTC)n Simple_repeat Simple_repeat 3 172 0 3 1315 1002 224 9 9 chr15 95723297 95723518 -7771456 + URR1B DNA MER1_type 5 225 0 3 1315 325 250 117 29 chr15 95724107 95724210 -7770764 - PB1D10 SINE Alu -5 112 1 3 1315 182 333 117 11 chr15 95724424 95724518 -7770456 - L4 LINE RTE -127 1902 1799 3 1315 3591 113 127 10 chr15 95725680 95726288 -7768686 - Lx3C LINE L1 -3 6973 6295 3 1315 938 52 251 84 chr15 95726467 95726610 -7768364 + B2_Mm2 SINE B2 1 180 -15 3 1315 225 0 0 0 chr15 95726610 95726635 -7768339 + (GA)n Simple_repeat Simple_repeat 2 26 0 3 1315 938 52 251 84 chr15 95726635 95726658 -7768316 + B2_Mm2 SINE B2 181 195 0 3 1315 371 289 36 29 chr15 95727058 95727197 -7767777 - MLT1J1 LTR MaLR -118 326 187 3 1315 372 296 27 34 chr15 95727345 95727492 -7767482 + MER104 DNA Tc2 36 181 0 3 1315 250 281 99 43 chr15 95728582 95728723 -7766251 - MLT1L LTR MaLR -3 607 459 3 1315 521 300 62 0 chr15 95728942 95729072 -7765902 - ID_B1 SINE B4 0 224 87 3 1315 1150 248 119 63 chr15 95729076 95729472 -7765502 + MTD LTR MaLR 2 419 0 3 1315 266 306 0 0 chr15 95729490 95729552 -7765422 - tRNA-Ala-GCY_ tRNA tRNA -13 62 1 3 1315 448 343 27 110 chr15 95729585 95729664 -7765310 + MER2B DNA MER2_type 2 71 -265 3 1315 673 274 38 24 chr15 95729664 95729877 -7765097 + B3 SINE B2 1 216 0 3 1315 594 306 96 25 chr15 95729877 95730134 -7764840 + MER2 DNA MER2_type 65 319 -26 3 1315 840 127 16 0 chr15 95731287 95731413 -7763561 - B1_Mus1 SINE Alu -20 128 1 3 1315 416 314 100 41 chr15 95731417 95731686 -7763288 - L1M5 LINE L1 -1945 4201 3917 3 1315 693 224 0 33 chr15 95731707 95731859 -7763115 + B1_Mur1 SINE Alu 3 149 0 3 1315 590 326 97 34 chr15 95731946 95732244 -7762730 - MER2 DNA MER2_type -27 318 2 3 1315 381 260 124 26 chr15 95732418 95732683 -7762291 + L1MA8 LINE L1 5938 6228 -63 3 1315 835 286 73 30 chr15 95732800 95733103 -7761871 - Lx8 LINE L1 -142 7331 7016 3 1315 1021 203 65 9 chr15 95733189 95733403 -7761571 - URR1B DNA MER1_type 0 225 1 3 1315 26 50 0 0 chr15 95733570 95733610 -7761364 + AT_rich Low_complexity Low_complexity 1 40 0 3 1315 283 176 39 0 chr15 95734716 95734767 -7760207 - L2b LINE L2 -2 3373 3321 3 1315 592 281 105 8 chr15 95735260 95735508 -7759466 + L1M5 LINE L1 5550 5821 -303 3 1315 251 256 49 0 chr15 95736547 95736629 -7758345 - L2a LINE L2 -1 3425 3340 4 1315 524 320 153 26 chr15 95737177 95737485 -7757489 + ORR1E LTR MaLR 9 355 -4 4 1315 272 152 22 0 chr15 95737622 95737664 -7757310 - MTD LTR MaLR 0 421 379 4 1315 3463 154 84 15 chr15 95737664 95738270 -7756704 - RMER19B LTR ERVK -2 900 253 4 1315 461 129 0 0 chr15 95738268 95738338 -7756636 - RMER19B LTR ERVK -831 71 2 4 1315 1425 249 41 22 chr15 95738338 95738647 -7756327 - MTD LTR MaLR -83 336 21 4 1315 345 192 10 29 chr15 95738647 95738749 -7756225 + GA-rich Low_complexity Low_complexity 1 100 0 4 1315 1364 107 102 0 chr15 95738828 95739033 -7755941 + URR1A DNA MER1_type 1 226 0 4 1315 541 258 130 99 chr15 95739323 95739437 -7755537 - MER44C DNA MER2_type 0 733 604 4 1315 246 32 0 0 chr15 95739437 95739468 -7755506 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1315 541 258 130 99 chr15 95739468 95739646 -7755328 - MER44C DNA MER2_type -130 603 432 4 1315 1557 52 10 5 chr15 95739666 95739858 -7755116 + B2_Mm2 SINE B2 1 193 -2 4 1315 261 0 0 0 chr15 95739873 95739902 -7755072 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1315 225 0 0 0 chr15 95739916 95739941 -7755033 + (ACTG)n Simple_repeat Simple_repeat 3 27 0 4 1315 678 213 7 29 chr15 95739950 95740090 -7754884 - ORR1D1 LTR MaLR -237 137 1 4 1315 284 148 16 0 chr15 95740749 95740810 -7754164 + A-rich Low_complexity Low_complexity 2 63 0 4 1315 1453 241 72 65 chr15 95741045 95741489 -7753485 - RLTR16 LTR ERVK -58 447 1 4 1315 365 276 67 0 chr15 95741742 95741847 -7753127 - MTD LTR MaLR -14 405 294 4 1315 222 62 0 0 chr15 95742266 95742298 -7752676 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1315 405 295 52 39 chr15 95742931 95743086 -7751888 + RSINE1 SINE B4 4 160 -5 4 1315 523 287 108 35 chr15 95743362 95743548 -7751426 + B3A SINE B2 1 198 -18 4 1315 25 0 0 0 chr15 95743572 95743597 -7751377 + AT_rich Low_complexity Low_complexity 1 25 0 4 1315 218 275 81 32 chr15 95744718 95744842 -7750132 + MIR SINE MIR 77 206 -56 4 1315 250 357 60 52 chr15 95745170 95745421 -7749553 - Tigger12 DNA MER2_type -111 1848 1596 4 1315 440 346 17 11 chr15 95747678 95747859 -7747115 - MER2 DNA MER2_type -75 270 89 4 1315 250 208 42 0 chr15 95747965 95748013 -7746961 - MER2 DNA MER2_type -294 51 2 4 1315 22 0 0 0 chr15 95748165 95748187 -7746787 + AT_rich Low_complexity Low_complexity 1 22 0 4 1315 32 0 0 0 chr15 95748331 95748363 -7746611 + AT_rich Low_complexity Low_complexity 1 32 0 4 1315 4358 56 4 0 chr15 95748368 95748906 -7746068 - L1Md_F2 LINE L1 0 6582 6043 4 1315 1004 120 0 21 chr15 95749044 95749189 -7745785 + B1_Mur2 SINE Alu 1 142 -7 4 1315 2507 65 16 6 chr15 95749564 95749887 -7745087 - ORR1A2 LTR MaLR -1 326 1 4 1315 267 31 0 0 chr15 95750639 95750671 -7744303 + (TC)n Simple_repeat Simple_repeat 1 32 0 4 1315 522 180 0 0 chr15 95751014 95751114 -7743860 + (TA)n Simple_repeat Simple_repeat 2 101 0 4 1315 1287 164 18 31 chr15 95751446 95751673 -7743301 + URR1B DNA MER1_type 2 225 0 4 1315 312 91 0 0 chr15 95752166 95752210 -7742764 + (TGG)n Simple_repeat Simple_repeat 1 44 0 4 1315 647 287 73 10 chr15 95752273 95752477 -7742497 - B4A SINE B4 -15 277 61 4 1315 2585 236 42 46 chr15 95752464 95753135 -7741839 + ORR1D2-int LTR MaLR 703 1370 0 4 1315 1675 188 88 0 chr15 95753135 95753475 -7741499 + ORR1D2 LTR MaLR 1 370 0 4 1315 305 248 109 9 chr15 95753475 95753585 -7741389 - L1MB7 LINE L1 -134 6044 5924 4 1315 768 316 70 8 chr15 95753677 95754050 -7740924 - L1MB7 LINE L1 -278 5906 5511 4 1315 2162 120 9 0 chr15 95754098 95754414 -7740560 + ORR1A2 LTR MaLR 1 319 -8 4 1315 334 232 163 12 chr15 95754421 95754616 -7740358 - L1MB7 LINE L1 -710 5468 5241 4 1315 273 29 0 0 chr15 95754786 95754820 -7740154 + (TTTG)n Simple_repeat Simple_repeat 4 37 0 4 1315 346 318 96 14 chr15 95754834 95754996 -7739978 - L1M4 LINE L1 -4724 2284 2112 4 1315 330 26 0 0 chr15 95754996 95755035 -7739939 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 4 1315 346 319 99 17 chr15 95755035 95755326 -7739648 - L1M4 LINE L1 -4897 2111 1795 4 1315 407 301 137 48 chr15 95755557 95755892 -7739082 - L1M4 LINE L1 -5485 1419 1055 4 1315 826 225 5 55 chr15 95756317 95756519 -7738455 - B3A SINE B2 -5 193 2 4 1315 528 294 33 103 chr15 95756869 95757112 -7737862 - L1MB7 LINE L1 -1650 4496 4271 4 1315 212 220 0 145 chr15 95757112 95757181 -7737793 + PB1D9 SINE Alu 62 120 0 4 1315 847 211 97 10 chr15 95757541 95757737 -7737237 + B3 SINE B2 4 216 0 4 1315 261 305 24 24 chr15 95758746 95758830 -7736144 + MIRb SINE MIR 91 174 -94 4 1315 846 150 104 35 chr15 95758990 95759163 -7735811 - B2_Mm2 SINE B2 -5 190 6 4 1315 222 37 0 0 chr15 95759179 95759206 -7735768 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1315 252 292 103 26 chr15 95759212 95759328 -7735646 - RSINE1 SINE B4 -31 134 10 4 1315 414 297 80 13 chr15 95759340 95759490 -7735484 - MIRc SINE MIR -46 222 63 4 1315 239 315 0 0 chr15 95760091 95760164 -7734810 + (GGGTG)n Simple_repeat Simple_repeat 4 76 0 4 1315 2174 112 48 0 chr15 95761185 95761497 -7733477 + ORR1A2 LTR MaLR 1 327 0 4 1315 1805 301 78 39 chr15 95762724 95763574 -7731400 - Lx8 LINE L1 -2 7471 6589 4 1315 1801 161 28 31 chr15 95764502 95764862 -7730112 + RLTR15 LTR ERVK 1 359 0 4 1315 999 90 0 52 chr15 95764866 95765019 -7729955 + B1_Mur4 SINE Alu 6 150 0 4 1315 279 0 0 0 chr15 95766490 95766521 -7728453 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1315 1039 146 97 51 chr15 95766658 95766874 -7728100 - URR1A DNA MER1_type 0 226 1 4 1315 826 177 14 0 chr15 95767494 95767641 -7727333 + B1_Mur2 SINE Alu 1 149 0 4 1315 418 218 30 0 chr15 95767777 95767878 -7727096 + L1M2 LINE L1 2649 2752 -3128 4 1315 290 299 109 22 chr15 95767911 95768048 -7726926 + B3A SINE B2 46 194 -4 4 1315 509 253 59 47 chr15 95768050 95768407 -7726567 + L1M2 LINE L1 2804 3197 -2946 4 1315 1264 82 60 11 chr15 95768407 95768592 -7726382 + B2_Mm2 SINE B2 1 194 -1 4 1315 424 267 45 90 chr15 95768592 95768612 -7726362 + L1M2 LINE L1 3151 3164 -2716 4 1315 254 231 116 93 chr15 95769442 95769571 -7725403 + MER5B DNA MER1_type 8 139 -39 4 1315 1623 189 71 11 chr15 95769751 95769931 -7725043 - ORR1D1 LTR MaLR 0 374 177 4 1315 459 0 0 0 chr15 95769931 95769982 -7724992 + (GA)n Simple_repeat Simple_repeat 2 52 0 4 1315 1623 189 71 11 chr15 95769982 95770154 -7724820 - ORR1D1 LTR MaLR -198 176 1 4 1315 725 135 282 0 chr15 95770671 95770834 -7724140 - URR1A DNA MER1_type -5 221 13 4 1315 379 0 39 0 chr15 95772897 95772948 -7722026 + (CCCCCA)n Simple_repeat Simple_repeat 3 55 0 4 1315 278 284 82 49 chr15 95773122 95773244 -7721730 + MIRb SINE MIR 119 244 -24 4 1315 1076 97 0 0 chr15 95773387 95773531 -7721443 + B1_Mus2 SINE Alu 1 144 -3 4 1315 180 97 0 0 chr15 95773535 95773566 -7721408 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1315 216 0 0 0 chr15 95773966 95773990 -7720984 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1315 1571 43 21 0 chr15 95774348 95774536 -7720438 + B2_Mm1a SINE B2 2 193 0 4 1315 431 204 0 112 chr15 95774655 95774771 -7720203 + MT2B LTR ERVL 155 257 -344 4 1315 915 129 14 14 chr15 95774675 95774816 -7720158 + B1_Mur3 SINE Alu 9 149 0 4 1315 315 0 0 0 chr15 95775495 95775530 -7719444 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1315 282 56 0 0 chr15 95776793 95776829 -7718145 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1315 379 187 0 51 chr15 95777320 95777399 -7717575 - URR1B DNA MER1_type 0 225 151 4 1315 1027 146 5 100 chr15 95777802 95778022 -7716952 - URR1B DNA MER1_type 0 225 27 4 1315 27 62 0 0 chr15 95778092 95778140 -7716834 + AT_rich Low_complexity Low_complexity 1 48 0 4 1315 357 154 14 0 chr15 95778145 95778210 -7716764 - B2_Mm2 SINE B2 -82 116 46 4 1315 1358 58 23 0 chr15 95778225 95778398 -7716576 - B2_Mm2 SINE B2 -16 179 3 4 1315 246 128 0 0 chr15 95779620 95779659 -7715315 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1315 234 0 0 0 chr15 95779815 95779841 -7715133 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 1315 660 279 82 19 chr15 95780572 95780839 -7714135 + B4A SINE B4 4 287 -5 4 1315 1273 102 11 0 chr15 95781002 95781179 -7713795 + B2_Mm1t SINE B2 2 180 -13 4 1315 201 74 0 0 chr15 95781188 95781215 -7713759 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1315 315 0 0 0 chr15 95781216 95781251 -7713723 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 4 1315 298 302 42 25 chr15 95781462 95781581 -7713393 - MIRm SINE MIR -115 161 41 4 1315 471 271 101 29 chr15 95781791 95782000 -7712974 - MLT1D LTR MaLR 0 505 282 4 1315 191 240 0 20 chr15 95784041 95784092 -7710882 + MER5B DNA MER1_type 122 171 -7 4 1315 2347 69 69 0 chr15 95785718 95786024 -7708950 + ORR1A2 LTR MaLR 1 327 0 4 1315 1340 220 87 23 chr15 95788860 95789204 -7705770 - MTE2a LTR MaLR -13 366 1 4 1315 879 188 53 53 chr15 95792749 95792957 -7702017 - B3 SINE B2 -7 209 2 4 1315 202 256 115 11 chr15 95793639 95793726 -7701248 + MIRc SINE MIR 3 98 -170 4 1315 279 0 0 0 chr15 95794429 95794460 -7700514 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1315 405 0 0 0 chr15 95795137 95795182 -7699792 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1315 451 283 13 27 chr15 95796820 95796969 -7698005 + B1F SINE Alu 1 147 -2 4 1315 1737 21 0 0 chr15 95797291 95797483 -7697491 - B2_Mm1a SINE B2 0 193 2 4 1315 23 0 0 0 chr15 95798714 95798737 -7696237 + AT_rich Low_complexity Low_complexity 1 23 0 4 1315 267 269 34 25 chr15 95799326 95799444 -7695530 + PB1D9 SINE Alu 2 120 0 4 1315 197 33 0 32 chr15 95799444 95799475 -7695499 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 4 1315 846 322 96 30 chr15 95800019 95800595 -7694379 + L1M2 LINE L1 2377 2990 -3153 4 1315 267 147 0 56 chr15 95801584 95801656 -7693318 + CT-rich Low_complexity Low_complexity 2 69 0 4 1315 229 292 123 9 chr15 95802010 95802124 -7692850 + L1M5 LINE L1 5695 5821 -352 4 1315 852 238 16 0 chr15 95802213 95802402 -7692572 + B3 SINE B2 1 192 -24 4 1315 252 0 0 0 chr15 95805180 95805208 -7689766 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1315 22 0 0 0 chr15 95805849 95805871 -7689103 + AT_rich Low_complexity Low_complexity 1 22 0 4 1315 414 0 0 0 chr15 95806639 95806685 -7688289 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1315 221 188 42 0 chr15 95806771 95806819 -7688155 + GA-rich Low_complexity Low_complexity 4 53 0 5 1315 531 308 51 15 chr15 95807041 95807234 -7687740 + ORR1E LTR MaLR 3 185 -185 5 1315 270 136 0 0 chr15 95807346 95807390 -7687584 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 1315 1272 173 122 28 chr15 95807392 95807564 -7687410 - RMER17C LTR ERVK -14 396 200 5 1315 237 83 0 0 chr15 95807564 95807600 -7687374 + (CAGA)n Simple_repeat Simple_repeat 1 36 0 5 1315 1272 173 122 28 chr15 95807600 95807789 -7687185 - RMER17C LTR ERVK -211 199 2 5 1315 207 0 0 0 chr15 95807965 95807988 -7686986 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1315 272 333 12 0 chr15 95808659 95808743 -7686231 + MLT2B2 LTR ERVL 2 86 -429 5 1315 741 246 230 16 chr15 95808853 95808941 -7686033 - MTD LTR MaLR 0 419 313 5 1315 354 98 0 0 chr15 95808941 95808992 -7685982 + (CACCAT)n Simple_repeat Simple_repeat 4 54 0 5 1315 741 246 230 16 chr15 95808992 95809221 -7685753 - MTD LTR MaLR -107 312 34 5 1315 1517 180 125 41 chr15 95809423 95809910 -7685064 + RLTR31_Mm LTR ERVK 34 561 0 5 1315 317 89 58 19 chr15 95810361 95810464 -7684510 + T-rich Low_complexity Low_complexity 6 112 0 5 1315 1195 68 0 0 chr15 95810464 95810610 -7684364 - B1_Mus2 SINE Alu 0 147 2 5 1315 707 314 139 18 chr15 95810638 95811192 -7683782 + L1M2 LINE L1 1906 2526 -4323 5 1315 253 304 29 10 chr15 95811215 95811318 -7683656 + ID_B1 SINE B4 72 176 -48 5 1315 364 222 81 0 chr15 95811232 95811331 -7683643 + B1F2 SINE Alu 10 116 -33 5 1315 323 279 51 0 chr15 95811352 95811431 -7683543 + L1M2 LINE L1 3321 3403 -3442 5 1315 471 212 67 15 chr15 95811467 95811601 -7683373 + Lx5 LINE L1 6906 7046 -4 5 1315 307 252 84 56 chr15 95811622 95811765 -7683209 + L1M2 LINE L1 3435 3581 -3264 5 1315 294 352 0 19 chr15 95812193 95812300 -7682674 + RSINE1 SINE B4 44 148 -17 5 1315 1930 296 102 31 chr15 95812401 95813444 -7681530 + L1MA4 LINE L1 2151 3267 -2613 5 1315 180 111 0 0 chr15 95813448 95813475 -7681499 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 164 322 156 62 15 chr15 95813612 95813677 -7681297 + Lx7 LINE L1 5697 5764 -1932 5 1316 1652 283 70 20 chr15 95813767 95813893 -7681081 + Lx8 LINE L1 6221 6347 -1126 5 1316 1446 80 0 11 chr15 95813893 95814082 -7680892 - B2_Mm2 SINE B2 -8 187 1 5 1316 1652 283 70 20 chr15 95814082 95814442 -7680532 + Lx8 LINE L1 6348 6731 -742 5 1316 398 272 116 6 chr15 95814602 95814842 -7680132 + L1MA4 LINE L1 3379 3644 -2236 5 1316 799 311 28 28 chr15 95814989 95815240 -7679734 + B4 SINE B4 42 292 0 5 1316 393 75 0 0 chr15 95815258 95815311 -7679663 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1316 1607 281 64 33 chr15 95815315 95816017 -7678957 + L1MA4 LINE L1 3691 4414 -1466 5 1316 2066 291 107 49 chr15 95816052 95817091 -7677883 + Lx9 LINE L1 6533 7631 -13 5 1316 1889 267 67 64 chr15 95817125 95817833 -7677141 + L1MA4 LINE L1 4428 5170 -973 5 1316 216 0 0 0 chr15 95817833 95817857 -7677117 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 5 1316 1889 246 96 70 chr15 95817857 95818364 -7676610 + L1MA4 LINE L1 5136 5681 -616 5 1316 759 246 9 14 chr15 95819335 95819545 -7675429 + L1MA4 LINE L1 5690 5898 -402 5 1316 407 269 0 0 chr15 95819551 95819655 -7675319 + B3 SINE B2 7 110 -106 5 1316 213 108 0 0 chr15 95819655 95819692 -7675282 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1316 21 57 0 0 chr15 95819692 95819727 -7675247 + AT_rich Low_complexity Low_complexity 1 35 0 5 1316 1183 281 114 20 chr15 95820035 95820533 -7674441 + MER89 LTR ERV1 3 547 -12 5 1316 2511 163 87 48 chr15 95820848 95821410 -7673564 - RLTR31A_Mm LTR ERVK 0 584 1 5 1316 726 285 46 20 chr15 95822658 95822855 -7672119 + B3A SINE B2 15 216 0 5 1316 837 243 141 64 chr15 95822975 95823641 -7671333 + L1MA7 LINE L1 2380 3098 -3747 5 1316 26 0 0 0 chr15 95823873 95823899 -7671075 + AT_rich Low_complexity Low_complexity 1 26 0 5 1316 1326 134 188 10 chr15 95823921 95824214 -7670760 + IAPLTR4 LTR ERVK 1 345 0 5 1316 363 265 26 0 chr15 95824217 95824334 -7670640 + L1MA7 LINE L1 3549 3668 -3177 5 1316 613 210 0 55 chr15 95824346 95824363 -7670611 + B1_Mur1 SINE Alu 1 13 -136 5 1316 3187 68 0 2 chr15 95824363 95824760 -7670214 - MTB LTR MaLR 0 400 5 5 1316 613 210 0 55 chr15 95824760 95824888 -7670086 + B1_Mur1 SINE Alu 14 138 -11 5 1316 267 210 32 0 chr15 95824900 95824962 -7670012 + L1MA7 LINE L1 3671 3734 -3111 5 1316 3369 249 100 7 chr15 95824962 95825861 -7669113 + RMER1A Other Other 38 1020 -10 5 1316 1486 260 90 94 chr15 95825961 95826878 -7668096 + L1MA7 LINE L1 3749 4658 -2187 5 1316 333 0 0 0 chr15 95826878 95826915 -7668059 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1316 1486 260 90 94 chr15 95826915 95826944 -7668030 + L1MA7 LINE L1 4659 4690 -2155 5 1316 2986 298 101 20 chr15 95827019 95827761 -7667213 + Lx8 LINE L1 6176 6952 -521 5 1316 225 0 0 0 chr15 95827761 95827786 -7667188 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 1316 2986 298 101 20 chr15 95827786 95828243 -7666731 + Lx8 LINE L1 6953 7471 -2 5 1316 272 205 53 55 chr15 95828242 95828339 -7666635 + L1MB8 LINE L1 6085 6178 0 5 1316 657 244 16 50 chr15 95828389 95828631 -7666343 + L1MA7 LINE L1 5259 5492 -1353 5 1316 650 272 12 184 chr15 95828633 95828975 -7665999 + B4A SINE B4 1 283 -9 5 1316 324 0 0 0 chr15 95828990 95829026 -7665948 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1316 232 217 0 126 chr15 95829026 95829121 -7665853 + L1MD LINE L1 5197 5279 -867 5 1316 252 220 33 11 chr15 95829491 95829583 -7665391 + (CATATA)n Simple_repeat Simple_repeat 2 95 0 5 1316 870 188 75 128 chr15 95829635 95829916 -7665058 - MT2A LTR ERVL -266 267 2 5 1316 1243 301 64 36 chr15 95829919 95830695 -7664279 + L1M2 LINE L1 1962 2759 -4090 5 1316 715 226 156 49 chr15 95831125 95831413 -7663561 + ORR1D2 LTR MaLR 1 319 -51 5 1316 363 121 0 0 chr15 95831434 95831492 -7663482 + (CATA)n Simple_repeat Simple_repeat 2 59 0 5 1316 212 281 0 50 chr15 95831512 95831572 -7663402 + B3A SINE B2 63 119 -79 5 1316 1438 267 54 81 chr15 95831623 95831809 -7663165 + L1MA7 LINE L1 5965 6132 -861 5 1316 387 227 61 43 chr15 95831809 95831924 -7663050 + PB1D7 SINE Alu 1 117 -3 5 1316 198 0 0 0 chr15 95831933 95831955 -7663019 + (CAA)n Simple_repeat Simple_repeat 3 24 0 5 1316 1438 267 54 81 chr15 95831955 95832379 -7662595 + L1MA7 LINE L1 6133 6558 -435 5 1316 1842 208 28 13 chr15 95832379 95832773 -7662201 - Lx4B LINE L1 -4 7054 6655 5 1316 1438 280 50 82 chr15 95832773 95832920 -7662054 + L1MA7 LINE L1 6558 6708 -297 5 1316 268 247 0 49 chr15 95834077 95834158 -7660816 + L2a LINE L2 3350 3426 0 5 1316 2163 152 35 10 chr15 95834776 95835175 -7659799 + MTC LTR MaLR 5 413 -8 5 1316 2013 169 56 15 chr15 95835328 95835724 -7659250 + MTC LTR MaLR 2 413 -8 5 1316 24 0 0 0 chr15 95835768 95835792 -7659182 + AT_rich Low_complexity Low_complexity 1 24 0 5 1316 403 88 56 56 chr15 95836709 95836889 -7658085 + (TA)n Simple_repeat Simple_repeat 1 180 0 5 1316 651 311 33 22 chr15 95837305 95837581 -7657393 + L1M3 LINE L1 3889 4167 -1973 5 1316 631 276 127 23 chr15 95837715 95837975 -7656999 + RMER19C LTR ERVK 2 288 -323 5 1316 201 139 0 0 chr15 95838173 95838216 -7656758 + (A)n Simple_repeat Simple_repeat 1 43 0 5 1316 277 373 8 8 chr15 95838772 95838891 -7656083 - L2a LINE L2 -290 3136 3018 5 1316 270 268 26 53 chr15 95838917 95839095 -7655879 + MLT1L LTR MaLR 268 407 -105 5 1316 239 224 0 0 chr15 95840112 95840161 -7654813 + RSINE1 SINE B4 51 99 -66 5 1316 267 215 25 12 chr15 95840287 95840367 -7654607 + C-rich Low_complexity Low_complexity 3 83 0 5 1316 1210 62 0 0 chr15 95840488 95840633 -7654341 - B1_Mus1 SINE Alu 0 148 4 5 1316 324 0 0 0 chr15 95840633 95840669 -7654305 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1316 180 0 0 0 chr15 95841145 95841165 -7653809 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 5 1316 216 86 0 0 chr15 95842443 95842478 -7652496 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1316 182 105 26 0 chr15 95842544 95842582 -7652392 + (CACCC)n Simple_repeat Simple_repeat 3 41 0 5 1316 551 144 44 81 chr15 95842582 95842718 -7652256 - ORR1D2 LTR MaLR -239 131 1 5 1316 1565 47 0 20 chr15 95843705 95843901 -7651073 - B2_Mm1a SINE B2 0 193 2 5 1316 24 0 0 0 chr15 95844380 95844404 -7650570 + AT_rich Low_complexity Low_complexity 1 24 0 5 1316 3567 40 28 5 chr15 95846300 95846726 -7648248 + RLTR10C LTR ERVK 1 436 0 5 1316 21 57 0 0 chr15 95846742 95846777 -7648197 + AT_rich Low_complexity Low_complexity 1 35 0 5 1316 1442 155 96 79 chr15 95846782 95847377 -7647597 - RMER6C LTR ERVK -12 708 215 5 1316 678 158 0 9 chr15 95847374 95847489 -7647485 - RLTR25B LTR ERVK -888 140 27 5 1316 792 130 91 8 chr15 95847762 95847894 -7647080 + B1_Mur4 SINE Alu 1 143 -7 5 1316 507 111 29 36 chr15 95847897 95848037 -7646937 + (TAGA)n Simple_repeat Simple_repeat 2 140 0 5 1316 240 179 14 29 chr15 95848064 95848121 -7646853 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 5 1316 677 43 22 0 chr15 95848121 95848213 -7646761 + (GAAA)n Simple_repeat Simple_repeat 4 97 0 5 1316 240 179 14 29 chr15 95848213 95848224 -7646750 + (TAGA)n Simple_repeat Simple_repeat 2 13 0 5 1316 233 188 56 28 chr15 95848458 95848529 -7646445 - L1M5 LINE L1 -1833 4313 4241 5 1316 371 253 84 7 chr15 95848556 95848711 -7646263 + L1MD LINE L1 4370 4536 -1610 5 1316 234 322 39 28 chr15 95848721 95848903 -7646071 + L1MA4A LINE L1 5039 5222 -921 5 1316 355 305 33 1 chr15 95849094 95849248 -7645726 + L1MA4A LINE L1 5779 5937 -354 5 1316 259 145 28 42 chr15 95849707 95849779 -7645195 + (TA)n Simple_repeat Simple_repeat 2 72 0 5 1316 4002 165 105 72 chr15 95849808 95850681 -7644293 + RMER19B LTR ERVK 1 902 0 5 1316 322 322 0 69 chr15 95850683 95850813 -7644161 - MLT2B1 LTR ERVL -69 498 378 5 1316 308 306 145 0 chr15 95850858 95851044 -7643930 + L1MD LINE L1 4575 4787 -1359 5 1316 228 35 0 0 chr15 95851410 95851439 -7643535 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 5 1316 21 57 0 0 chr15 95851553 95851588 -7643386 + AT_rich Low_complexity Low_complexity 1 35 0 5 1316 186 133 0 0 chr15 95852317 95852347 -7642627 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1316 1754 242 52 18 chr15 95853521 95854017 -7640957 + RMER15 LTR ERVL 24 536 -39 5 1316 345 109 0 0 chr15 95854145 95854200 -7640774 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 1316 594 285 0 0 chr15 95854200 95854337 -7640637 - RSINE1 SINE B4 -24 141 5 5 1316 262 336 27 14 chr15 95854789 95854937 -7640037 + L1M2 LINE L1 1634 1783 -5066 5 1316 432 284 23 58 chr15 95854966 95855102 -7639872 - RLTR11B LTR ERVK -15 438 305 5 1316 3285 47 12 2 chr15 95855102 95855505 -7639469 + MTB_Mm LTR MaLR 1 407 0 5 1316 432 284 23 58 chr15 95855505 95855540 -7639434 - RLTR11B LTR ERVK -149 304 273 5 1316 536 261 105 61 chr15 95855577 95855859 -7639115 - RLTR11B LTR ERVK -151 294 1 5 1316 1340 312 65 21 chr15 95855901 95856856 -7638118 + L1_Rod LINE L1 1182 2184 -3663 5 1316 493 307 7 32 chr15 95856859 95857014 -7637960 + RSINE1 SINE B4 5 155 -10 5 1316 271 0 25 25 chr15 95857034 95857074 -7637900 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 1316 933 198 58 0 chr15 95857078 95857285 -7637689 + L1_Mur3 LINE L1 3687 3905 -1975 6 1316 5763 46 11 69 chr15 95857290 95857392 -7637582 + RLTR13C2 LTR ERVK 1 102 -706 6 1316 4897 55 3 0 chr15 95857392 95857977 -7636997 - LTRIS_Mus LTR ERV1 0 587 1 6 1316 5763 46 11 69 chr15 95857977 95858732 -7636242 + RLTR13C2 LTR ERVK 103 808 0 6 1316 1581 290 101 26 chr15 95858738 95859285 -7635689 + L1_Mur3 LINE L1 3911 4482 -1398 6 1316 243 0 0 0 chr15 95859285 95859312 -7635662 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 1316 1581 290 101 29 chr15 95859312 95859689 -7635285 + L1_Mur3 LINE L1 4483 4929 -1211 6 1316 333 62 0 0 chr15 95860109 95860157 -7634817 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1316 625 293 101 40 chr15 95860561 95860956 -7634018 + L1MA4A LINE L1 5500 5918 -385 6 1316 422 176 169 173 chr15 95860968 95861216 -7633758 + RMER4B LTR ERVK 1 247 -338 6 1316 372 254 16 69 chr15 95861274 95861470 -7633504 + RMER4B LTR ERVK 415 561 -24 6 1316 21 82 0 0 chr15 95862847 95862896 -7632078 + AT_rich Low_complexity Low_complexity 1 49 0 6 1316 367 274 37 0 chr15 95862908 95863010 -7631964 + PB1D10 SINE Alu 10 117 0 6 1316 306 0 0 0 chr15 95863010 95863044 -7631930 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1316 303 28 0 0 chr15 95863044 95863079 -7631895 + (GA)n Simple_repeat Simple_repeat 1 36 0 6 1316 398 248 19 6 chr15 95863314 95863472 -7631502 + CT-rich Low_complexity Low_complexity 1 160 0 6 1316 457 254 36 0 chr15 95863499 95863609 -7631365 - PB1D10 SINE Alu -3 114 1 6 1316 1799 264 61 15 chr15 95863610 95864149 -7630825 - Ricksha DNA MuDR -566 2680 2117 6 1316 191 204 0 22 chr15 95864655 95864700 -7630274 - L2c LINE L2 -232 3155 3112 6 1316 358 320 34 34 chr15 95864754 95864932 -7630042 - MLT1C LTR MaLR 0 467 290 6 1316 260 120 20 0 chr15 95865146 95865196 -7629778 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 1316 290 152 0 17 chr15 95865263 95865323 -7629651 + (TA)n Simple_repeat Simple_repeat 2 60 0 6 1316 186 143 0 0 chr15 95865339 95865374 -7629600 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 6 1316 270 0 0 0 chr15 95865396 95865426 -7629548 + (GA)n Simple_repeat Simple_repeat 1 30 0 6 1316 369 117 0 0 chr15 95865428 95865488 -7629486 + (TA)n Simple_repeat Simple_repeat 1 60 0 6 1316 920 301 94 43 chr15 95865528 95866248 -7628726 - L1MA5A LINE L1 -368 5929 5103 6 1316 480 257 29 4 chr15 95866247 95866385 -7628589 - L1MA5A LINE L1 -1190 4953 4801 6 1316 457 260 44 28 chr15 95866401 95866583 -7628391 + L1_Mur1 LINE L1 4213 4397 -1489 6 1316 744 269 20 82 chr15 95866718 95867070 -7627904 + L1M3 LINE L1 4400 4729 -1411 6 1316 321 68 0 0 chr15 95867240 95867284 -7627690 + (TTA)n Simple_repeat Simple_repeat 2 45 0 6 1316 23 33 0 0 chr15 95867974 95868004 -7626970 + AT_rich Low_complexity Low_complexity 1 30 0 6 1316 767 242 0 12 chr15 95869110 95869273 -7625701 + B3 SINE B2 1 161 -55 6 1316 580 251 92 8 chr15 95869309 95869475 -7625499 + B3 SINE B2 2 181 -17 6 1316 200 182 0 0 chr15 95869476 95869509 -7625465 + (CACG)n Simple_repeat Simple_repeat 3 35 0 6 1316 682 338 61 18 chr15 95870593 95870919 -7624055 - MER2 DNA MER2_type 0 345 6 6 1316 1310 90 17 6 chr15 95871408 95871587 -7623387 + B2_Mm2 SINE B2 1 181 -14 6 1316 560 256 130 5 chr15 95871742 95871927 -7623047 + Lx9 LINE L1 5777 5984 -1660 6 1316 1824 190 15 12 chr15 95871925 95872266 -7622708 - Lx9 LINE L1 -569 7075 6734 6 1316 240 86 0 0 chr15 95872271 95872306 -7622668 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1316 260 312 48 56 chr15 95872313 95872564 -7622410 - Lx9 LINE L1 -1359 6285 6037 6 1316 828 121 9 5 chr15 95872729 95872946 -7622028 + (TAGA)n Simple_repeat Simple_repeat 1 218 0 6 1316 225 94 0 0 chr15 95872946 95872978 -7621996 + (TGGA)n Simple_repeat Simple_repeat 1 32 0 6 1316 655 283 26 42 chr15 95873117 95873309 -7621665 + B3A SINE B2 1 189 -9 6 1316 696 300 27 18 chr15 95873667 95873891 -7621083 + B4A SINE B4 1 226 -66 6 1316 261 0 0 0 chr15 95873955 95873984 -7620990 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1316 553 217 0 16 chr15 95874273 95874527 -7620447 + (TG)n Simple_repeat Simple_repeat 1 249 0 6 1316 674 181 6 22 chr15 95874524 95874705 -7620269 + (TATG)n Simple_repeat Simple_repeat 1 178 0 6 1316 471 296 78 49 chr15 95874948 95875254 -7619720 + MER74A LTR ERVL 120 434 -124 6 1316 246 307 123 69 chr15 95877927 95878130 -7616844 - MIR SINE MIR -34 228 15 6 1316 207 88 0 0 chr15 95878460 95878494 -7616480 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1316 469 326 14 14 chr15 95878520 95878663 -7616311 + ID_B1 SINE B4 82 224 0 6 1316 4283 57 0 4 chr15 95878926 95879453 -7615521 - L1_Mus1 LINE L1 0 6567 6043 6 1316 516 32 0 0 chr15 95879699 95879761 -7615213 + (GA)n Simple_repeat Simple_repeat 1 62 0 6 1316 539 277 24 36 chr15 95880389 95880554 -7614420 - RSINE1 SINE B4 0 165 3 6 1316 737 252 120 70 chr15 95881032 95881374 -7613600 + MLT2D LTR ERVL 6 364 -50 6 1316 707 162 15 37 chr15 95881720 95881855 -7613119 + B1_Mur3 SINE Alu 2 133 -16 6 1316 2858 98 2 29 chr15 95883060 95883471 -7611503 - L1VL4 LINE L1 -5704 598 199 6 1316 864 213 40 5 chr15 95883949 95884147 -7610827 - B3 SINE B2 -7 209 5 6 1316 195 204 0 0 chr15 95884822 95884866 -7610108 + (ATG)n Simple_repeat Simple_repeat 3 46 0 6 1316 182 216 118 0 chr15 95884881 95884932 -7610042 - MIR SINE MIR -21 241 185 6 1316 1565 136 61 107 chr15 95885087 95885450 -7609524 - ORR1B1 LTR MaLR -8 386 41 6 1316 292 317 0 19 chr15 95886665 95886771 -7608203 + (CGAG)n Simple_repeat Simple_repeat 4 107 0 6 1316 205 151 19 19 chr15 95886771 95886825 -7608149 + GA-rich Low_complexity Low_complexity 3 56 0 6 1316 812 75 15 15 chr15 95886846 95886982 -7607992 + (GA)n Simple_repeat Simple_repeat 2 137 0 6 1316 214 351 37 0 chr15 95887053 95887244 -7607730 + L2a LINE L2 2918 3115 -311 6 1316 1258 251 4 7 chr15 95887304 95887585 -7607389 + B4 SINE B4 5 284 -8 6 1316 391 324 29 0 chr15 95887797 95887933 -7607041 - Lx8 LINE L1 -353 7120 6981 6 1316 589 276 5 22 chr15 95888220 95888405 -7606569 - B3A SINE B2 -16 182 1 6 1316 249 279 124 77 chr15 95888572 95889054 -7605920 - L1MCa LINE L1 -5104 1404 900 6 1316 318 67 0 0 chr15 95889094 95889139 -7605835 + (TTG)n Simple_repeat Simple_repeat 3 47 0 6 1316 291 289 67 121 chr15 95889855 95890079 -7604895 + LTR85c LTR Gypsy? 410 621 -202 6 1316 830 127 0 8 chr15 95890989 95891116 -7603858 - URR1B DNA MER1_type 0 225 100 6 1316 397 296 52 109 chr15 95892501 95892694 -7602280 - MLT1E2 LTR MaLR -445 182 1 6 1316 402 330 53 51 chr15 95893182 95893556 -7601418 - L2a LINE L2 -88 3338 2964 6 1316 190 295 114 13 chr15 95893857 95893936 -7601038 - MIRb SINE MIR -155 113 27 6 1316 465 289 78 8 chr15 95893979 95894108 -7600866 + RSINE1 SINE B4 3 140 -25 6 1316 1032 196 2 2 chr15 95894278 95894855 -7600119 + (CCCA)n Simple_repeat Simple_repeat 1 577 0 6 1316 266 371 91 6 chr15 95896191 95896367 -7598607 + MIR SINE MIR 26 216 -46 6 1316 205 178 0 0 chr15 95896633 95896678 -7598296 + T-rich Low_complexity Low_complexity 1 45 0 6 1316 1103 70 14 0 chr15 95896683 95896826 -7598148 - B1_Mus1 SINE Alu 0 148 4 6 1316 740 144 112 15 chr15 95897516 95897650 -7597324 - B1_Mur2 SINE Alu -1 148 2 6 1316 424 250 40 10 chr15 95898098 95898199 -7596775 - MER20 DNA MER1_type -115 104 1 6 1316 1225 170 9 43 chr15 95899616 95899849 -7595125 + URR1B DNA MER1_type 1 225 0 6 1316 27 0 0 0 chr15 95900685 95900712 -7594262 + AT_rich Low_complexity Low_complexity 1 27 0 6 1316 238 319 108 7 chr15 95900716 95900729 -7594245 + MT2C_Mm LTR ERVL 97 244 -226 6 1316 496 263 16 25 chr15 95900729 95900850 -7594124 + ID_B1 SINE B4 78 197 -27 6 1316 383 299 102 0 chr15 95900858 95901005 -7593969 + MIR SINE MIR 70 231 -31 6 1316 408 20 0 0 chr15 95901051 95901100 -7593874 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1316 538 312 52 66 chr15 95901290 95901578 -7593396 - RLTR12B LTR ERVK 0 528 245 6 1316 193 214 10 10 chr15 95901590 95901689 -7593285 + CT-rich Low_complexity Low_complexity 2 100 0 6 1316 441 156 0 0 chr15 95901723 95901819 -7593155 + CT-rich Low_complexity Low_complexity 2 97 0 6 1316 701 270 43 93 chr15 95901833 95902123 -7592851 - RLTR11B LTR ERVK -159 286 1 6 1316 1302 75 40 6 chr15 95903151 95903325 -7591649 + B2_Mm2 SINE B2 1 180 -15 6 1316 396 0 0 0 chr15 95903325 95903369 -7591605 + (GA)n Simple_repeat Simple_repeat 1 44 0 6 1316 24 0 0 0 chr15 95907052 95907076 -7587898 + AT_rich Low_complexity Low_complexity 1 24 0 6 1316 204 67 0 0 chr15 95907441 95907471 -7587503 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 6 1316 411 73 0 0 chr15 95907884 95907939 -7587035 + (GGGA)n Simple_repeat Simple_repeat 1 55 0 6 1316 268 300 13 67 chr15 95908329 95908404 -7586570 - BC1_Mm scRNA scRNA -67 85 15 6 1316 355 373 35 16 chr15 95908825 95909081 -7585893 - HERV16-int LTR ERVL -3981 1015 755 6 1316 266 256 91 23 chr15 95909223 95909311 -7585663 + ID_B1 SINE B4 100 193 -31 6 1316 300 287 18 44 chr15 95909335 95909448 -7585526 + B4A SINE B4 1 110 -182 6 1316 1347 244 153 3 chr15 95909713 95910079 -7584895 - MTC LTR MaLR 0 421 1 6 1316 567 141 24 12 chr15 95911418 95911583 -7583391 + (TCTCTG)n Simple_repeat Simple_repeat 2 168 0 6 1316 1197 188 31 4 chr15 95911879 95912104 -7582870 + RLTR42-int LTR ERVK 1114 1344 -4178 6 1316 480 163 0 0 chr15 95912104 95912190 -7582784 + GA-rich Low_complexity Low_complexity 1 86 0 6 1316 814 174 42 73 chr15 95912190 95912382 -7582592 + RLTR42-int LTR ERVK 1340 1525 -3997 6 1316 64 62 0 0 chr15 95912461 95912574 -7582400 + AT_rich Low_complexity Low_complexity 1 113 0 6 1316 201 121 0 0 chr15 95914242 95914275 -7580699 + (T)n Simple_repeat Simple_repeat 1 33 0 7 1316 644 95 47 19 chr15 95914275 95914382 -7580592 - B1_Mur4 SINE Alu 0 150 41 7 1316 933 168 0 6 chr15 95914382 95914735 -7580239 + (CCTG)n Simple_repeat Simple_repeat 1 351 0 7 1316 225 216 0 38 chr15 95914744 95914797 -7580177 - B1_Mus2 SINE Alu -92 55 5 7 1316 24 85 0 0 chr15 95915051 95915110 -7579864 + AT_rich Low_complexity Low_complexity 1 59 0 7 1316 2136 128 65 6 chr15 95915439 95915778 -7579196 + ORR1B2 LTR MaLR 1 359 -8 7 1316 501 174 16 99 chr15 95917056 95917177 -7577797 + URR1B DNA MER1_type 113 223 -2 7 1316 25 0 0 0 chr15 95918113 95918138 -7576836 + AT_rich Low_complexity Low_complexity 1 25 0 7 1316 635 279 14 29 chr15 95918355 95918562 -7576412 + B3 SINE B2 10 213 -3 7 1316 322 295 0 110 chr15 95918574 95918692 -7576282 + MT2B LTR ERVL 155 259 -342 7 1316 611 199 22 2 chr15 95918588 95918712 -7576262 + B1_Mus1 SINE Alu 2 137 -10 7 1316 810 260 54 47 chr15 95919140 95919418 -7575556 - B4A SINE B4 -11 281 2 7 1316 5293 124 82 12 chr15 95919608 95920451 -7574523 - RMER19B LTR ERVK 0 902 1 7 1316 328 280 32 11 chr15 95920689 95920783 -7574191 + Cheshire DNA MER1_type 185 280 -2140 7 1316 3861 198 45 21 chr15 95921132 95921923 -7573051 + Lx6 LINE L1 6220 7029 -431 7 1316 1570 237 108 58 chr15 95921930 95922449 -7572525 - RLTR20B3 LTR ERVK -12 565 21 7 1316 1579 200 153 11 chr15 95922453 95922832 -7572142 + Lx6 LINE L1 7026 7458 -2 7 1316 192 77 0 0 chr15 95922862 95922888 -7572086 + (GGA)n Simple_repeat Simple_repeat 2 27 0 7 1316 403 288 107 9 chr15 95922927 95923039 -7571935 + RSINE1 SINE B4 3 125 -40 7 1316 342 67 0 0 chr15 95923040 95923085 -7571889 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1316 3304 190 68 43 chr15 95923088 95923642 -7571332 + RLTR40 LTR ERVK 11 580 -237 7 1316 216 0 0 0 chr15 95923642 95923666 -7571308 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 1316 3304 190 68 43 chr15 95923666 95923852 -7571122 + RLTR40 LTR ERVK 581 768 -49 7 1316 414 0 0 0 chr15 95923861 95923907 -7571067 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1316 999 318 30 11 chr15 95923925 95924294 -7570680 - Lx9 LINE L1 -661 6983 6608 7 1316 562 292 18 22 chr15 95924288 95924532 -7570442 + Lx9 LINE L1 6878 7239 -405 7 1316 831 325 88 35 chr15 95925892 95926686 -7568288 - L1ME1 LINE L1 -43 6136 5301 7 1316 788 242 41 59 chr15 95926693 95926913 -7568061 - Lx8 LINE L1 -133 7340 7125 7 1316 661 241 7 33 chr15 95927004 95927154 -7567820 - B3A SINE B2 -8 190 45 7 1316 210 37 0 0 chr15 95927933 95927960 -7567014 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 1316 225 183 0 0 chr15 95927962 95928022 -7566952 + GA-rich Low_complexity Low_complexity 1 60 0 7 1316 440 305 174 32 chr15 95928103 95928569 -7566405 - L1ME1 LINE L1 -1916 4230 3711 7 1316 1620 67 4 47 chr15 95928596 95928830 -7566144 + L1Md_F2 LINE L1 6359 6582 0 7 1316 310 217 17 0 chr15 95929671 95929731 -7565243 + PB1D10 SINE Alu 31 91 -26 7 1316 317 233 0 11 chr15 95929754 95929845 -7565129 + GA-rich Low_complexity Low_complexity 1 90 0 7 1316 1276 152 9 69 chr15 95929850 95929965 -7565009 + URR1A DNA MER1_type 8 121 -105 7 1316 1202 40 0 20 chr15 95929965 95930116 -7564858 + B1_Mus1 SINE Alu 1 148 0 7 1316 1276 152 9 69 chr15 95930116 95930233 -7564741 + URR1A DNA MER1_type 122 226 0 7 1316 287 328 41 16 chr15 95931207 95931328 -7563646 + MIR SINE MIR 18 141 -121 7 1316 2359 94 41 33 chr15 95931367 95931731 -7563243 + ORR1B2 LTR MaLR 1 367 0 7 1316 273 333 0 45 chr15 95932050 95932138 -7562836 + MLT1I LTR MaLR 326 409 -2 7 1316 260 258 0 0 chr15 95932231 95932293 -7562681 - ID4 SINE ID -17 66 5 7 1316 962 215 62 0 chr15 95933018 95933213 -7561761 + B3 SINE B2 3 209 -7 7 1316 706 131 0 0 chr15 95933740 95933839 -7561135 + B3 SINE B2 3 101 -115 7 1316 186 43 0 0 chr15 95933839 95933862 -7561112 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1316 342 0 0 0 chr15 95933917 95933955 -7561019 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1316 207 0 0 0 chr15 95934193 95934216 -7560758 + (A)n Simple_repeat Simple_repeat 1 23 0 7 1316 221 0 35 0 chr15 95934697 95934726 -7560248 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 7 1316 306 316 67 55 chr15 95934783 95934947 -7560027 - RMER15 LTR ERVL -7 568 403 7 1316 423 96 40 27 chr15 95935157 95935232 -7559742 - HAL1-3A_ME LINE L1 -808 2050 1975 7 1316 374 244 0 6 chr15 95935252 95935425 -7559549 + (TG)n Simple_repeat Simple_repeat 1 172 0 7 1316 222 276 11 22 chr15 95935427 95935516 -7559458 + (TATATG)n Simple_repeat Simple_repeat 3 90 0 7 1316 336 251 0 0 chr15 95935520 95935691 -7559283 + (TG)n Simple_repeat Simple_repeat 2 172 0 7 1316 324 235 0 0 chr15 95935703 95935818 -7559156 + (TG)n Simple_repeat Simple_repeat 2 116 0 7 1316 287 323 71 0 chr15 95936085 95936184 -7558790 - LTR33C LTR ERVL -322 307 202 7 1316 494 272 23 2 chr15 95936391 95936535 -7558439 - LTR33C LTR ERVL -482 147 1 7 1316 204 40 0 0 chr15 95936612 95936637 -7558337 + (CTCTG)n Simple_repeat Simple_repeat 1 25 0 7 1316 237 288 15 0 chr15 95937234 95937300 -7557674 + L2c LINE L2 3289 3355 -32 7 1316 539 198 32 65 chr15 95937510 95937634 -7557340 + PB1D9 SINE Alu 1 120 0 7 1316 815 63 23 8 chr15 95938289 95938417 -7556557 + (GGA)n Simple_repeat Simple_repeat 2 131 0 7 1316 666 232 59 7 chr15 95938592 95938744 -7556230 + RSINE1 SINE B4 6 165 0 7 1316 558 301 27 49 chr15 95938805 95938990 -7555984 - B3A SINE B2 -16 182 2 7 1316 227 204 143 0 chr15 95939332 95939381 -7555593 - Charlie24 DNA MER1_type -412 2038 1983 7 1316 1311 291 14 19 chr15 95939635 95939999 -7554975 + ORR1D2 LTR MaLR 5 366 -4 7 1316 4982 219 66 70 chr15 95940003 95940296 -7554678 + ORR1D2-int LTR MaLR 1 299 -1071 7 1316 905 167 199 6 chr15 95940296 95940477 -7554497 + B3 SINE B2 1 216 0 7 1316 4982 219 66 70 chr15 95940477 95941503 -7553471 + ORR1D2-int LTR MaLR 300 1315 -55 7 1316 313 304 176 0 chr15 95941940 95942065 -7552909 + Tigger5 DNA MER2_type 2260 2406 0 7 1316 206 293 0 0 chr15 95942651 95942709 -7552265 + MIR SINE MIR 97 154 -108 7 1316 1153 117 15 78 chr15 95942950 95943154 -7551820 + RMER15 LTR ERVL 52 242 -333 7 1316 339 290 81 0 chr15 95943154 95943278 -7551696 - Tigger5 DNA MER2_type -101 2305 2172 7 1316 850 293 74 4 chr15 95943283 95943513 -7551461 - Tigger5 DNA MER2_type -2153 253 8 7 1317 202 87 43 0 chr15 95946175 95946221 -7548753 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 7 1317 247 279 12 12 chr15 95946679 95946759 -7548215 + PB1D10 SINE Alu 24 103 -14 7 1317 306 0 0 0 chr15 95946786 95946820 -7548154 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1317 283 237 40 0 chr15 95946820 95946896 -7548078 + BC1_Mm scRNA scRNA 15 93 -59 7 1317 21 0 0 0 chr15 95947033 95947054 -7547920 + AT_rich Low_complexity Low_complexity 1 21 0 7 1317 247 320 39 10 chr15 95947336 95947440 -7547534 + MER104 DNA Tc2 39 145 -36 7 1317 1157 219 5 14 chr15 95947578 95947796 -7547178 - B3 SINE B2 0 216 1 7 1317 303 28 0 0 chr15 95947839 95947875 -7547099 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1317 349 292 124 28 chr15 95948227 95948445 -7546529 + MIRb SINE MIR 29 267 -1 7 1317 295 94 31 15 chr15 95948656 95948721 -7546253 + (TTTTTG)n Simple_repeat Simple_repeat 2 67 0 7 1317 2038 140 24 41 chr15 95948759 95949176 -7545798 + RMER17C LTR ERVK 1 410 0 7 1317 586 270 14 0 chr15 95949325 95949473 -7545501 + RSINE1 SINE B4 3 152 -13 7 1317 198 0 0 0 chr15 95949491 95949513 -7545461 + (CAAA)n Simple_repeat Simple_repeat 1 22 0 7 1317 270 0 0 0 chr15 95949630 95949660 -7545314 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 1317 567 310 0 0 chr15 95949661 95949806 -7545168 - RSINE1 SINE B4 -19 146 2 7 1317 365 252 29 66 chr15 95949896 95950032 -7544942 + RMER15 LTR ERVL 1 131 -444 7 1317 1433 183 158 3 chr15 95950036 95950359 -7544615 - ORR1D1 LTR MaLR -1 373 1 7 1317 1179 250 14 7 chr15 95950392 95950674 -7544300 + RMER15 LTR ERVL 276 559 -16 7 1317 438 20 0 0 chr15 95950680 95950731 -7544243 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 1317 1318 87 44 0 chr15 95950908 95951091 -7543883 - B2_Mm2 SINE B2 -4 191 1 7 1317 602 253 0 32 chr15 95951286 95951441 -7543533 + Lx8 LINE L1 6381 6530 -943 7 1317 433 302 129 57 chr15 95951457 95951931 -7543043 - RLTR12B LTR ERVK -20 508 1 7 1317 1291 333 10 25 chr15 95951936 95952417 -7542557 + Lx8 LINE L1 6549 7022 -451 7 1317 415 362 57 48 chr15 95952450 95952781 -7542193 + L2 LINE L2 2460 2793 -626 7 1317 2328 303 96 41 chr15 95952781 95954255 -7540719 + Lx8 LINE L1 5439 6960 -513 7 1317 279 0 0 0 chr15 95955731 95955762 -7539212 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 7 1317 188 324 85 38 chr15 95955812 95955918 -7539056 - L2b LINE L2 -24 3351 3241 7 1317 566 258 0 0 chr15 95956037 95956161 -7538813 - B1F2 SINE Alu -25 124 1 7 1317 283 265 128 0 chr15 95956161 95956262 -7538712 - MER5A1 DNA MER1_type -33 133 20 7 1317 733 268 94 49 chr15 95956965 95957232 -7537742 + ERVL-int LTR ERVL 3377 3655 -2059 7 1317 5281 265 47 42 chr15 95957246 95959133 -7535841 + ERVL-int LTR ERVL 3909 5756 -1 7 1317 395 274 231 27 chr15 95959140 95959365 -7535609 + MLT2B2 LTR ERVL 16 286 -229 7 1317 434 328 17 23 chr15 95959804 95959918 -7535056 - MER106A DNA MER1_type -62 174 65 7 1317 315 0 0 0 chr15 95959918 95959953 -7535021 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1317 434 328 17 23 chr15 95959953 95960013 -7534961 - MER106A DNA MER1_type -172 64 2 7 1317 1625 138 4 0 chr15 95960496 95960750 -7534224 - RLTR41 LTR ERV1 -1 445 191 7 1317 478 149 0 11 chr15 95960739 95960827 -7534147 - RLTR41 LTR ERV1 -359 87 1 7 1317 447 19 0 0 chr15 95961198 95961250 -7533724 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 1317 195 85 0 60 chr15 95961797 95961847 -7533127 + (CAAAAA)n Simple_repeat Simple_repeat 3 49 0 7 1317 1339 164 50 94 chr15 95962084 95962467 -7532507 - RMER10A LTR ERVL -76 366 1 7 1317 227 222 0 0 chr15 95963536 95963581 -7531393 - MLT1D LTR MaLR -8 497 453 7 1317 855 253 5 21 chr15 95963583 95963773 -7531201 + B3 SINE B2 3 189 -27 7 1317 24 32 0 0 chr15 95963801 95963832 -7531142 + AT_rich Low_complexity Low_complexity 1 31 0 7 1317 405 291 90 2 chr15 95963867 95964104 -7530870 + B4A SINE B4 1 272 -20 8 1317 222 128 0 0 chr15 95964142 95964181 -7530793 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 1317 251 299 96 53 chr15 95964535 95964743 -7530231 - ORR1E LTR MaLR -142 217 1 8 1317 389 244 76 8 chr15 95964977 95965109 -7529865 + RSINE1 SINE B4 13 153 -12 8 1317 23 0 0 0 chr15 95965250 95965273 -7529701 + AT_rich Low_complexity Low_complexity 1 23 0 8 1317 183 162 0 0 chr15 95966240 95966277 -7528697 + C-rich Low_complexity Low_complexity 5 41 0 8 1317 180 0 0 0 chr15 95966597 95966617 -7528357 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 8 1317 289 200 0 0 chr15 95966644 95966699 -7528275 - B2_Mm2 SINE B2 -94 101 47 8 1317 1364 79 11 0 chr15 95966711 95966888 -7528086 - B2_Mm1t SINE B2 -13 180 2 8 1317 319 182 26 0 chr15 95967082 95967159 -7527815 + CT-rich Low_complexity Low_complexity 1 79 0 8 1317 203 0 0 36 chr15 95967422 95967450 -7527524 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 1317 237 65 0 0 chr15 95968375 95968406 -7526568 + (A)n Simple_repeat Simple_repeat 1 31 0 8 1317 745 218 107 15 chr15 95968903 95969099 -7525875 - B3 SINE B2 -2 214 1 8 1317 467 252 136 19 chr15 95970863 95971065 -7523909 - Lx7 LINE L1 -17 7679 7339 8 1317 192 40 0 0 chr15 95971065 95971090 -7523884 + (CAAAG)n Simple_repeat Simple_repeat 5 29 0 8 1317 467 273 77 46 chr15 95971090 95971220 -7523754 - Lx7 LINE L1 -358 7338 7215 8 1317 1431 218 122 146 chr15 95971223 95971259 -7523715 - MT2A LTR ERVL -3 530 496 8 1317 1212 106 0 0 chr15 95971259 95971438 -7523536 + (TG)n Simple_repeat Simple_repeat 2 180 0 8 1317 1431 218 122 146 chr15 95971438 95971944 -7523030 - MT2A LTR ERVL -38 495 1 8 1317 733 227 108 87 chr15 95971958 95972409 -7522565 - RMER2 LTR ERV1 -5 562 1 8 1317 1161 238 108 10 chr15 95972409 95972706 -7522268 - Lx7 LINE L1 -499 7197 6872 8 1317 1414 195 60 26 chr15 95972707 95973055 -7521919 - ORR1C1 LTR MaLR 0 378 19 8 1317 1414 240 33 68 chr15 95973104 95973471 -7521503 - Lx7 LINE L1 -893 6803 6450 8 1317 978 181 1 7 chr15 95973502 95973726 -7521248 + RLTR12A LTR ERVK 1 219 -309 8 1317 799 337 70 40 chr15 95973735 95973816 -7521158 + Lx8 LINE L1 2089 2167 -3680 8 1317 208 0 62 0 chr15 95973816 95973848 -7521126 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 1317 799 337 70 40 chr15 95973848 95974674 -7520300 + Lx8 LINE L1 2168 3024 -2823 8 1317 352 241 28 50 chr15 95975534 95975713 -7519261 + (GTGTG)n Simple_repeat Simple_repeat 2 176 0 8 1317 1213 88 16 11 chr15 95975741 95975925 -7519049 - B2_Mm2 SINE B2 -2 193 9 8 1317 189 195 0 0 chr15 95975973 95976014 -7518960 + A-rich Low_complexity Low_complexity 1 41 0 8 1317 239 289 0 0 chr15 95976014 95976097 -7518877 + L1M2 LINE L1 3025 3107 -3036 8 1317 435 241 78 44 chr15 95976184 95976388 -7518586 + L1M2 LINE L1 5001 5211 -932 8 1317 1829 161 2 143 chr15 95976388 95976808 -7518166 + ORR1B2 LTR MaLR 6 366 -1 8 1317 1299 283 46 69 chr15 95976809 95977730 -7517244 + Lx8 LINE L1 5147 6103 -1541 8 1317 180 0 0 0 chr15 95978559 95978579 -7516395 + (CA)n Simple_repeat Simple_repeat 2 21 0 8 1317 312 27 0 0 chr15 95978885 95978922 -7516052 + (TTTC)n Simple_repeat Simple_repeat 2 38 0 8 1317 819 236 34 5 chr15 95979091 95979300 -7515674 - B3 SINE B2 0 216 2 8 1317 646 185 0 13 chr15 95979472 95979779 -7515195 + (TG)n Simple_repeat Simple_repeat 1 302 0 8 1317 605 196 0 11 chr15 95979790 95979971 -7515003 + (TG)n Simple_repeat Simple_repeat 1 179 0 8 1317 539 168 0 53 chr15 95980018 95980207 -7514767 + (TG)n Simple_repeat Simple_repeat 1 179 0 8 1317 330 326 14 34 chr15 95980255 95980401 -7514573 - RSINE1 SINE B4 -1 164 22 8 1317 291 269 0 0 chr15 95980966 95981044 -7513930 - L1MEg LINE L1 -4962 1122 1045 8 1317 1502 205 27 88 chr15 95981045 95981456 -7513518 + MTD LTR MaLR 2 387 -32 8 1317 271 113 16 16 chr15 95981474 95981537 -7513437 + (TTTTTG)n Simple_repeat Simple_repeat 3 65 0 8 1317 319 96 0 37 chr15 95981537 95981591 -7513383 + MTD LTR MaLR 368 419 0 8 1317 261 0 0 0 chr15 95981627 95981656 -7513318 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 1317 341 285 102 54 chr15 95981868 95982183 -7512791 - L1MEg LINE L1 -5376 708 379 8 1317 588 303 28 9 chr15 95982239 95982452 -7512522 - RMER15 LTR ERVL -3 572 356 8 1317 615 165 74 8 chr15 95982635 95982757 -7512217 - Lx7 LINE L1 -847 6849 6720 8 1317 1775 151 26 11 chr15 95982759 95983134 -7511840 - ORR1A2 LTR MaLR 0 394 3 8 1317 2028 175 19 25 chr15 95983134 95983441 -7511533 - Lx6 LINE L1 -772 6688 6378 8 1317 2282 125 52 0 chr15 95983441 95983786 -7511188 - ORR1B2 LTR MaLR 0 367 5 8 1317 2028 175 19 25 chr15 95983786 95983841 -7511133 - Lx6 LINE L1 -1083 6377 6328 8 1317 22 0 0 0 chr15 95983984 95984006 -7510968 + AT_rich Low_complexity Low_complexity 1 22 0 8 1317 279 303 40 47 chr15 95984758 95984907 -7510067 + MIRb SINE MIR 113 260 -8 8 1317 261 0 0 0 chr15 95985457 95985486 -7509488 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 8 1317 329 85 136 0 chr15 95985501 95985560 -7509414 - B2_Mm2 SINE B2 -82 116 46 8 1317 1157 62 112 0 chr15 95985574 95985735 -7509239 - B2_Mm1t SINE B2 -14 179 1 8 1317 885 110 0 0 chr15 95985798 95985934 -7509040 + (GGAA)n Simple_repeat Simple_repeat 3 138 0 8 1317 210 71 0 0 chr15 95985936 95985964 -7509010 + (CAAGG)n Simple_repeat Simple_repeat 2 29 0 8 1317 2221 220 45 9 chr15 95986622 95987159 -7507815 + RLTR12A LTR ERVK 1 556 -12 8 1317 1230 123 5 5 chr15 95987464 95987660 -7507314 - ORR1B2 LTR MaLR 0 367 172 8 1317 319 146 18 0 chr15 95987646 95987701 -7507273 - ORR1B2 LTR MaLR -312 58 3 8 1317 650 224 124 103 chr15 95987809 95988117 -7506857 + RLTR20D LTR ERVK 1 321 -247 8 1317 396 0 0 0 chr15 95988117 95988161 -7506813 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 1317 650 205 110 26 chr15 95988161 95988251 -7506723 + RLTR20D LTR ERVK 322 346 -222 8 1317 286 305 12 0 chr15 95988700 95988806 -7506168 + MIRc SINE MIR 56 163 -105 8 1317 405 0 0 0 chr15 95988968 95989013 -7505961 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 1317 809 154 0 14 chr15 95989307 95989452 -7505522 - URR1A DNA MER1_type -1 225 83 8 1317 312 187 79 13 chr15 95989721 95989797 -7505177 + B3 SINE B2 90 170 -46 8 1317 273 29 0 0 chr15 95989805 95989839 -7505135 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 1317 29 28 0 0 chr15 95989839 95989875 -7505099 + AT_rich Low_complexity Low_complexity 1 36 0 8 1317 1141 187 68 231 chr15 95990605 95991009 -7503965 + ORR1C2 LTR MaLR 1 332 -52 8 1317 1073 87 0 0 chr15 95991009 95991147 -7503827 + B1_Mus1 SINE Alu 2 139 -9 8 1317 306 0 0 0 chr15 95991147 95991181 -7503793 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 1317 1141 187 68 231 chr15 95991181 95991234 -7503740 + ORR1C2 LTR MaLR 333 383 -1 8 1317 3071 161 126 22 chr15 95991399 95992026 -7502948 + RLTR17 LTR ERVK 1 692 0 8 1317 240 35 0 0 chr15 95992322 95992351 -7502623 + (A)n Simple_repeat Simple_repeat 1 29 0 8 1317 21 36 0 0 chr15 95993057 95993085 -7501889 + AT_rich Low_complexity Low_complexity 1 28 0 8 1317 213 265 0 0 chr15 95994069 95994118 -7500856 - L2a LINE L2 0 3426 3378 8 1317 24 0 0 0 chr15 95995063 95995087 -7499887 + AT_rich Low_complexity Low_complexity 1 24 0 8 1317 360 0 0 0 chr15 95995436 95995476 -7499498 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 1317 1117 241 143 3 chr15 95996270 95996578 -7498396 + MTE2b LTR MaLR 29 379 0 8 1317 22 35 0 0 chr15 95997141 95997170 -7497804 + AT_rich Low_complexity Low_complexity 1 29 0 8 1317 215 111 0 0 chr15 95997191 95997227 -7497747 - B2_Mm2 SINE B2 -99 96 61 8 1317 1153 77 0 0 chr15 95997264 95997420 -7497554 - B2_Mm2 SINE B2 -39 156 1 8 1317 294 95 0 0 chr15 95997474 95997516 -7497458 + (TG)n Simple_repeat Simple_repeat 1 42 0 8 1317 222 236 18 18 chr15 95997548 95997604 -7497370 - RSINE1 SINE B4 -25 140 85 8 1317 414 174 0 0 chr15 95998576 95998685 -7496289 + CT-rich Low_complexity Low_complexity 2 110 0 8 1317 382 308 29 0 chr15 95998714 95998818 -7496156 - B1F SINE Alu -9 140 34 8 1317 187 305 17 17 chr15 95998943 95999003 -7495971 - MIR3 SINE MIR -11 197 138 8 1317 280 282 126 73 chr15 95999746 95999937 -7495037 + MER112 DNA MER1_type 38 238 -23 8 1317 232 171 65 91 chr15 96000776 96000853 -7494121 - MIR SINE MIR -116 146 72 1 1317 396 0 0 0 chr15 96001023 96001067 -7493907 + (TTA)n Simple_repeat Simple_repeat 2 45 0 2 1317 1104 94 0 0 chr15 96001067 96001226 -7493748 - B2_Mm2 SINE B2 -35 160 2 3 1317 414 319 130 13 chr15 96002198 96002497 -7492477 + L1MB8 LINE L1 5517 5850 -328 4 1317 339 207 73 0 chr15 96002617 96002699 -7492275 + L1MB8 LINE L1 6055 6142 -42 4 1317 330 198 58 11 chr15 96002743 96002830 -7492144 + PB1D7 SINE Alu 28 118 -2 5 1317 210 185 19 0 chr15 96002837 96002891 -7492083 + A-rich Low_complexity Low_complexity 4 58 0 6 1317 555 233 131 8 chr15 96003350 96003480 -7491494 + RSINE1 SINE B4 3 148 -17 7 1317 1477 43 5 16 chr15 96003534 96003721 -7491253 + B2_Mm1a SINE B2 2 186 -7 8 1317 930 216 34 48 chr15 96004759 96004968 -7490006 - Lx7 LINE L1 -1090 6606 6401 9 1317 189 74 0 0 chr15 96004984 96005011 -7489963 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1 1317 2075 158 37 31 chr15 96005011 96005536 -7489438 - RLTR31A_Mm LTR ERVK -35 522 1 1 1317 1439 259 33 23 chr15 96005536 96005927 -7489047 - Lx7 LINE L1 -1289 6407 6013 9 1317 805 97 329 27 chr15 96005982 96006131 -7488843 + B2_Mm2 SINE B2 2 195 0 1 1317 1381 83 17 0 chr15 96006137 96006318 -7488656 + B2_Mm2 SINE B2 1 184 -11 1 1317 2367 68 3 121 chr15 96007030 96007098 -7487876 + ORR1A2 LTR MaLR 1 57 -270 1 1317 1003 116 0 0 chr15 96007098 96007244 -7487730 - B1_Mm SINE Alu 0 147 2 1 1317 2367 68 3 121 chr15 96007244 96007546 -7487428 + ORR1A2 LTR MaLR 58 327 0 1 1317 353 271 29 36 chr15 96007694 96007832 -7487142 + B4A SINE B4 136 272 -20 1 1317 246 32 0 0 chr15 96008208 96008239 -7486735 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1317 224 272 167 20 chr15 96009710 96009860 -7485114 + MIR SINE MIR 78 249 -13 1 1317 3948 151 53 9 chr15 96010068 96010731 -7484243 + RLTR17 LTR ERVK 1 692 0 1 1317 295 340 51 6 chr15 96010912 96011069 -7483905 - RMER15 LTR ERVL -11 564 401 2 1317 294 98 0 0 chr15 96011350 96011401 -7483573 + (CAAAAA)n Simple_repeat Simple_repeat 4 54 0 2 1317 423 301 58 105 chr15 96011750 96012045 -7482929 - ORR1E LTR MaLR -7 372 75 2 1317 494 168 29 58 chr15 96012887 96013026 -7481948 + RLTR15 LTR ERVK 33 167 -192 2 1317 384 277 80 28 chr15 96013063 96013275 -7481699 + RLTR15 LTR ERVK 119 341 -18 2 1317 775 229 5 31 chr15 96013552 96013746 -7481228 + ORR1E LTR MaLR 1 189 -170 2 1317 438 143 0 0 chr15 96013753 96013830 -7481144 + (TC)n Simple_repeat Simple_repeat 1 77 0 2 1317 354 245 34 81 chr15 96013830 96013931 -7481043 + ORR1E LTR MaLR 242 353 -66 2 1317 395 185 12 0 chr15 96013931 96014012 -7480962 + MT2A LTR ERVL 1 82 -451 2 1317 349 109 31 0 chr15 96014015 96014079 -7480895 + (TA)n Simple_repeat Simple_repeat 1 66 0 2 1317 830 112 91 25 chr15 96014089 96014262 -7480712 - B2_Mm2 SINE B2 -16 182 2 2 1317 1400 242 63 0 chr15 96014262 96014606 -7480368 + MT2A LTR ERVL 74 439 -94 2 1317 821 194 34 22 chr15 96014851 96015030 -7479944 - URR1B DNA MER1_type -2 223 43 2 1317 282 237 78 13 chr15 96015526 96015603 -7479371 - PB1D10 SINE Alu -26 91 10 3 1317 246 176 0 0 chr15 96016324 96016375 -7478599 + C-rich Low_complexity Low_complexity 1 51 0 3 1317 590 249 31 49 chr15 96016438 96016662 -7478312 + ORR1E LTR MaLR 1 220 -139 3 1317 324 0 0 0 chr15 96016671 96016707 -7478267 + (TC)n Simple_repeat Simple_repeat 1 36 0 3 1317 342 0 0 0 chr15 96016707 96016744 -7478230 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1317 312 161 0 0 chr15 96016991 96017072 -7477902 + A-rich Low_complexity Low_complexity 1 81 0 3 1317 221 0 0 33 chr15 96017089 96017119 -7477855 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1317 579 322 23 18 chr15 96017491 96017709 -7477265 + B4A SINE B4 1 219 -73 3 1317 358 295 125 90 chr15 96017720 96017999 -7476975 + B4 SINE B4 4 292 0 3 1317 245 333 10 10 chr15 96018235 96018332 -7476642 - L2 LINE L2 -683 2736 2640 3 1317 3502 30 0 0 chr15 96018426 96018822 -7476152 - MTA_Mm LTR MaLR 0 396 1 4 1317 228 135 0 0 chr15 96019653 96019690 -7475284 + (A)n Simple_repeat Simple_repeat 1 37 0 4 1317 1989 181 113 19 chr15 96019749 96020211 -7474763 + RLTR16 LTR ERVK 1 505 0 4 1317 2179 205 5 80 chr15 96020310 96020887 -7474087 + RLTR20C LTR ERVK 1 534 0 4 1317 293 247 33 11 chr15 96021013 96021103 -7473871 + L1M4 LINE L1 4804 4895 -1245 4 1317 1076 298 98 27 chr15 96021268 96021816 -7473158 + Lx8 LINE L1 6887 7473 0 4 1317 242 190 69 92 chr15 96021745 96021832 -7473142 + RMER1C Other Other 1256 1340 -2 4 1317 2082 182 16 28 chr15 96021847 96022271 -7472703 + MTD LTR MaLR 1 419 0 4 1317 1683 253 43 55 chr15 96022273 96022855 -7472119 + Lx8 LINE L1 4394 4968 -912 4 1317 1655 155 107 19 chr15 96022860 96023450 -7471524 + RLTR26 LTR ERVK 1 642 0 4 1317 325 253 0 0 chr15 96023454 96023529 -7471445 + Lx8 LINE L1 4985 5059 -821 4 1317 3191 183 161 28 chr15 96023538 96024369 -7470605 - RMER19B LTR ERVK 0 902 1 5 1317 1338 283 39 34 chr15 96024369 96024906 -7470068 + Lx8 LINE L1 5061 5600 -280 4 1317 2383 49 30 3 chr15 96024912 96025241 -7469733 - ORR1A1 LTR MaLR -8 338 1 5 1317 515 276 119 22 chr15 96025302 96025528 -7469446 - Lx7 LINE L1 -1782 5914 5667 5 1317 283 202 74 63 chr15 96025531 96025626 -7469348 + Lx8 LINE L1 6102 6197 -1276 4 1317 475 201 110 0 chr15 96025629 96025748 -7469226 + B1_Mur1 SINE Alu 1 133 -17 5 1317 757 304 39 18 chr15 96025794 96026075 -7468899 + Lx8 LINE L1 6954 7240 -233 4 1317 3213 192 32 22 chr15 96026091 96026713 -7468261 - Lx7 LINE L1 -898 6798 6171 5 1317 748 177 7 41 chr15 96026725 96026872 -7468102 - Lx7 LINE L1 -1751 5945 5804 5 1317 497 240 68 34 chr15 96027071 96027308 -7467666 + RLTR15 LTR ERVK 45 289 -70 5 1317 718 298 71 10 chr15 96027471 96027917 -7467057 + L1M4 LINE L1 5228 5707 -476 4 1317 2410 185 19 25 chr15 96028183 96028714 -7466260 - RLTR12B LTR ERVK 0 528 1 5 1317 270 229 80 56 chr15 96028714 96028839 -7466135 + L1MB3 LINE L1 6041 6168 -15 5 1317 268 293 32 26 chr15 96028881 96029035 -7465939 - L1MC5 LINE L1 -355 7606 7452 5 1317 723 95 0 0 chr15 96029150 96029255 -7465719 + (TG)n Simple_repeat Simple_repeat 1 105 0 5 1317 362 230 80 0 chr15 96029266 96029366 -7465608 - PB1D9 SINE Alu -7 113 6 6 1317 23 0 0 0 chr15 96029828 96029851 -7465123 + AT_rich Low_complexity Low_complexity 1 23 0 6 1317 907 211 60 0 chr15 96029865 96030064 -7464910 + B3 SINE B2 6 216 0 6 1317 342 332 65 43 chr15 96030137 96030414 -7464560 - B4 SINE B4 -8 284 2 6 1317 229 294 21 11 chr15 96030426 96030519 -7464455 - L1MC5 LINE L1 -1014 7028 6935 5 1317 1059 116 0 0 chr15 96030844 96030990 -7463984 + B1_Mus2 SINE Alu 2 147 0 6 1317 654 307 93 40 chr15 96031613 96032056 -7462918 - L1MC5 LINE L1 -2141 5741 5271 5 1317 312 301 40 58 chr15 96032343 96032569 -7462405 - L1MC5 LINE L1 -1199 4947 4726 5 1317 286 91 36 0 chr15 96033981 96034036 -7460938 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 1317 545 259 15 22 chr15 96034054 96034188 -7460786 - RSINE1 SINE B4 -31 134 2 6 1317 539 261 47 29 chr15 96034348 96034518 -7460456 - B4A SINE B4 -114 178 6 6 1317 241 209 164 0 chr15 96034600 96034667 -7460307 - L1MC5 LINE L1 -2051 4095 4018 5 1317 272 340 30 20 chr15 96034766 96034865 -7460109 - MER5A1 DNA MER1_type -3 163 64 6 1317 708 336 46 14 chr15 96035480 96035896 -7459078 + L1M2 LINE L1 4739 5167 -976 6 1317 2649 178 138 5 chr15 96035891 96036479 -7458495 + L1_Mur3 LINE L1 289 954 -6774 7 1317 3771 177 37 24 chr15 96036511 96037315 -7457659 + L1_Mur3 LINE L1 2308 3122 -2758 7 1317 200 34 0 33 chr15 96037323 96037353 -7457621 + (TAA)n Simple_repeat Simple_repeat 2 30 0 7 1317 439 156 0 25 chr15 96037355 96037434 -7457540 + L1_Mur3 LINE L1 4670 4746 -1134 7 1317 2593 205 42 148 chr15 96037432 96037984 -7456990 + Lx6 LINE L1 6807 7273 -187 7 1317 465 103 0 0 chr15 96037984 96038052 -7456922 + (CATA)n Simple_repeat Simple_repeat 2 69 0 7 1317 2593 205 42 148 chr15 96038052 96038230 -7456744 + Lx6 LINE L1 7274 7459 -1 7 1317 21 0 0 0 chr15 96038288 96038309 -7456665 + AT_rich Low_complexity Low_complexity 1 21 0 7 1317 26 93 0 0 chr15 96038541 96038616 -7456358 + AT_rich Low_complexity Low_complexity 1 75 0 7 1317 408 265 14 75 chr15 96038616 96038828 -7456146 + L1M2 LINE L1 5157 5355 -788 6 1317 466 330 78 44 chr15 96038841 96039136 -7455838 + L1_Mur3 LINE L1 5508 5812 -68 7 1317 979 196 11 5 chr15 96039621 96039811 -7455163 - URR1B DNA MER1_type 0 225 35 7 1317 2103 144 3 19 chr15 96041032 96041401 -7453573 - RLTR17 LTR ERVK -232 460 98 7 1317 210 37 0 0 chr15 96041487 96041514 -7453460 + (CAAAAA)n Simple_repeat Simple_repeat 1 27 0 7 1317 975 234 128 78 chr15 96042844 96043243 -7451731 - MTD LTR MaLR 0 419 1 8 1317 630 193 76 0 chr15 96043246 96043365 -7451609 + B3 SINE B2 3 130 -86 8 1317 31 0 0 0 chr15 96043375 96043406 -7451568 + AT_rich Low_complexity Low_complexity 1 31 0 8 1317 351 0 0 0 chr15 96043636 96043675 -7451299 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1317 477 0 0 0 chr15 96043675 96043727 -7451247 + (GA)n Simple_repeat Simple_repeat 2 54 0 8 1317 315 324 34 54 chr15 96043919 96044066 -7450908 - MER106B DNA MER1_type -913 146 3 8 1317 740 191 124 52 chr15 96044811 96045021 -7449953 - URR1B DNA MER1_type 0 225 1 8 1317 281 156 68 51 chr15 96045735 96045911 -7449063 + (TA)n Simple_repeat Simple_repeat 1 179 0 8 1317 186 376 68 31 chr15 96046613 96046775 -7448199 - L4 LINE RTE -1786 243 76 8 1317 568 165 99 30 chr15 96046918 96047049 -7447925 - B1F2 SINE Alu -3 146 7 8 1317 885 308 109 45 chr15 96047470 96047957 -7447017 - MER21B LTR ERV1 -49 814 297 9 1317 3318 148 33 7 chr15 96048483 96049063 -7445911 + RLTR17 LTR ERVK 98 692 0 9 1317 351 141 0 15 chr15 96049079 96049144 -7445830 + ORR1D2 LTR MaLR 6 69 -301 9 1317 1063 186 68 50 chr15 96049158 96049379 -7445595 + URR1B DNA MER1_type 1 225 0 9 1317 270 143 20 0 chr15 96049508 96049557 -7445417 + ORR1D2 LTR MaLR 321 370 0 9 1317 249 33 0 0 chr15 96050065 96050095 -7444879 + (A)n Simple_repeat Simple_repeat 1 30 0 9 1317 195 170 0 0 chr15 96051447 96051494 -7443480 + C-rich Low_complexity Low_complexity 1 47 0 9 1317 351 0 0 0 chr15 96052077 96052116 -7442858 + (TG)n Simple_repeat Simple_repeat 1 39 0 9 1317 558 286 126 9 chr15 96052140 96052362 -7442612 - B4A SINE B4 -41 251 4 9 1317 201 74 0 0 chr15 96052716 96052743 -7442231 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 9 1317 224 30 0 29 chr15 96053495 96053529 -7441445 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 9 1317 333 242 104 10 chr15 96053719 96053815 -7441159 + B1F SINE Alu 23 127 -22 1 1317 214 167 0 143 chr15 96053874 96053937 -7441037 + B1_Mur1 SINE Alu 74 127 -22 1 1317 243 154 4 125 chr15 96053912 96053991 -7440983 + B1_Mur1 SINE Alu 63 127 -22 1 1317 2102 160 78 5 chr15 96053999 96054395 -7440579 + RMER19B LTR ERVK 478 902 0 1 1317 328 319 45 38 chr15 96054396 96054663 -7440311 + L1M2 LINE L1 3889 4157 -1986 1 1317 255 270 16 0 chr15 96054928 96054991 -7439983 - ID4_ SINE ID -18 65 2 1 1317 26 98 0 0 chr15 96055027 96055109 -7439865 + AT_rich Low_complexity Low_complexity 1 82 0 1 1317 4630 213 58 29 chr15 96055303 96056212 -7438762 + Lx9 LINE L1 6560 7465 -179 1 1317 189 74 0 0 chr15 96056212 96056239 -7438735 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1317 4630 213 58 29 chr15 96056239 96056384 -7438590 + Lx9 LINE L1 7466 7643 -1 1 1317 243 307 78 26 chr15 96057241 96057395 -7437579 + MER67C LTR ERV1 279 440 -271 1 1317 327 146 0 0 chr15 96058449 96058504 -7436470 + (CACG)n Simple_repeat Simple_repeat 3 57 0 1 1317 302 364 34 39 chr15 96058596 96058830 -7436144 - MIR SINE MIR 0 262 30 1 1317 324 209 58 11 chr15 96058963 96059050 -7435924 + B3 SINE B2 126 216 0 1 1317 3400 41 89 2 chr15 96059113 96059550 -7435424 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1317 2586 165 167 21 chr15 96059669 96060033 -7434941 + RMER19B LTR ERVK 61 466 -436 1 1317 4110 78 29 7 chr15 96060033 96060589 -7434385 - L1_Mus3 LINE L1 0 6638 6071 1 1317 2586 157 61 44 chr15 96060589 96061006 -7433968 + RMER19B LTR ERVK 467 902 0 1 1317 1073 150 5 34 chr15 96061006 96061213 -7433761 - URR1B DNA MER1_type -5 220 20 1 1317 1260 113 0 4 chr15 96061313 96061864 -7433110 + (TGGA)n Simple_repeat Simple_repeat 1 549 0 1 1317 341 299 55 79 chr15 96062528 96062782 -7432192 + RLTR12B LTR ERVK 19 266 -262 1 1317 27 29 0 0 chr15 96063400 96063434 -7431540 + AT_rich Low_complexity Low_complexity 1 34 0 1 1317 436 185 29 20 chr15 96063525 96063877 -7431097 + CT-rich Low_complexity Low_complexity 1 355 0 1 1317 39 50 0 0 chr15 96064659 96064719 -7430255 + AT_rich Low_complexity Low_complexity 1 60 0 1 1317 266 219 11 32 chr15 96064885 96064959 -7430015 - ID4_ SINE ID -63 89 14 1 1317 2263 147 68 0 chr15 96064959 96065023 -7429951 - RLTR20D LTR ERVK 0 568 468 1 1317 456 19 0 0 chr15 96065023 96065076 -7429898 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1317 2263 141 132 0 chr15 96065076 96065495 -7429479 - RLTR20D LTR ERVK -101 467 3 1 1317 354 347 33 40 chr15 96065812 96065936 -7429038 - ID_B1 SINE B4 -10 214 92 1 1317 352 236 36 121 chr15 96065936 96066076 -7428898 - MTE2b LTR MaLR -2 377 250 1 1317 418 242 14 43 chr15 96066078 96066216 -7428758 + G-rich Low_complexity Low_complexity 4 137 0 1 1317 335 313 0 0 chr15 96066219 96066318 -7428656 - MTE2b LTR MaLR -108 271 173 1 1317 21 57 0 0 chr15 96066345 96066380 -7428594 + AT_rich Low_complexity Low_complexity 1 35 0 1 1317 1130 75 0 14 chr15 96066390 96066538 -7428436 + B1_Mus1 SINE Alu 2 147 -1 1 1317 962 274 34 50 chr15 96066572 96066894 -7428080 + MTEa LTR MaLR 51 367 -12 1 1317 270 103 0 0 chr15 96067457 96067496 -7427478 + ORR1A2 LTR MaLR 3 41 -286 1 1317 358 84 36 36 chr15 96067497 96067608 -7427366 + (TATAA)n Simple_repeat Simple_repeat 2 112 0 1 1317 1366 109 149 25 chr15 96067618 96067918 -7427056 + ORR1A2 LTR MaLR 17 346 0 1 1317 286 306 12 0 chr15 96067935 96068020 -7426954 + (CA)n Simple_repeat Simple_repeat 1 86 0 1 1317 418 256 128 104 chr15 96068043 96068388 -7426586 + ORR1E LTR MaLR 1 353 -6 1 1317 434 317 56 0 chr15 96068409 96068551 -7426423 + ORR1E-int LTR MaLR 15 164 -1416 1 1317 1082 321 78 52 chr15 96069019 96069075 -7425899 + ORR1E-int LTR MaLR 151 204 -1376 1 1317 3426 36 2 0 chr15 96069075 96069468 -7425506 - MTA_Mm LTR MaLR 0 396 3 1 1317 1082 321 78 52 chr15 96069468 96070062 -7424912 + ORR1E-int LTR MaLR 205 818 -762 1 1317 310 262 12 12 chr15 96070071 96070156 -7424818 + ORR1E-int LTR MaLR 1446 1530 -50 1 1317 311 230 21 103 chr15 96070150 96070213 -7424761 + ORR1E LTR MaLR 12 72 -287 1 1317 2313 81 12 12 chr15 96070213 96070540 -7424434 + ORR1A2 LTR MaLR 1 327 0 1 1317 311 230 21 103 chr15 96070540 96070573 -7424401 + ORR1E LTR MaLR 73 100 -259 1 1317 267 211 19 52 chr15 96071104 96071259 -7423715 + (TATAA)n Simple_repeat Simple_repeat 1 150 0 1 1317 222 293 0 0 chr15 96071927 96071985 -7422989 + MIRc SINE MIR 193 250 -18 1 1317 3139 43 27 0 chr15 96072103 96072478 -7422496 + IAPEY_LTR LTR ERVK 1 385 0 1 1317 495 230 0 0 chr15 96073308 96073408 -7421566 - PB1D9 SINE Alu -6 114 15 1 1317 579 288 130 5 chr15 96073542 96073758 -7421216 - MLT1F2 LTR MaLR -2 558 316 1 1317 824 153 14 27 chr15 96073866 96074014 -7420960 - B1_Mus1 SINE Alu -2 146 1 1 1317 849 298 20 24 chr15 96074113 96074405 -7420569 - B4A SINE B4 0 292 2 1 1317 974 181 67 14 chr15 96074520 96074728 -7420246 + URR1A DNA MER1_type 1 219 -7 1 1317 1624 158 136 11 chr15 96075217 96075570 -7419404 + RLTR9D LTR ERVK 1 397 -6 1 164 570 89 0 0 chr15 96075773 96075852 -7419122 + B2_Mm2 SINE B2 1 79 -116 1 1318 2278 119 49 27 chr15 96076229 96076634 -7418340 - Lx LINE L1 -2 6652 6239 1 1318 2538 91 0 0 chr15 96077362 96077723 -7417251 - MTB LTR MaLR 0 400 40 1 1318 2297 92 35 3 chr15 96078347 96078664 -7416310 + ORR1A2 LTR MaLR 1 327 0 1 1318 843 167 0 7 chr15 96079136 96079281 -7415693 - B1_Mur2 SINE Alu -1 148 5 1 1318 235 340 138 67 chr15 96079332 96079600 -7415374 - L2b LINE L2 -40 3335 3049 1 1318 756 100 0 0 chr15 96079660 96079770 -7415204 + RMER19A LTR ERVK 1 110 -627 1 1318 251 262 14 36 chr15 96079783 96079889 -7415085 + L1MB3 LINE L1 5158 5260 -883 1 1318 330 321 16 81 chr15 96079922 96080169 -7414805 + L1MB3 LINE L1 5323 5553 -630 1 1318 658 270 114 83 chr15 96080179 96080520 -7414454 + L1MB3 LINE L1 5675 6042 -141 1 1318 3515 83 146 12 chr15 96080520 96081035 -7413939 - MT2B2 LTR ERVL 0 584 1 1 1318 658 270 114 83 chr15 96081035 96081141 -7413833 + L1MB3 LINE L1 6043 6136 -47 1 1318 1488 65 16 0 chr15 96081886 96082072 -7412902 + B2_Mm2 SINE B2 2 190 -5 1 1318 2070 140 35 177 chr15 96082281 96082801 -7412173 - RLTR41 LTR ERV1 0 446 1 1 1318 2681 144 31 42 chr15 96083335 96083858 -7411116 + RLTR28 LTR ERVL 1 517 -7 1 1318 399 21 0 0 chr15 96084223 96084271 -7410703 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1318 490 222 121 18 chr15 96084297 96084462 -7410512 + MTEa LTR MaLR 3 184 -195 1 1318 333 193 97 44 chr15 96084484 96084598 -7410376 + MTEa LTR MaLR 223 342 -37 1 1318 803 220 68 5 chr15 96085379 96085571 -7409403 + B3 SINE B2 3 206 -10 1 1318 207 0 0 0 chr15 96086029 96086052 -7408922 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 1 1318 597 251 69 12 chr15 96086286 96086459 -7408515 + B3A SINE B2 1 183 -15 1 1318 22 35 0 0 chr15 96086479 96086508 -7408466 + AT_rich Low_complexity Low_complexity 1 29 0 1 1318 794 131 0 0 chr15 96086530 96086652 -7408322 + B1_Mus1 SINE Alu 25 146 -2 1 1318 906 147 37 6 chr15 96086843 96087007 -7407967 - URR1A DNA MER1_type 0 226 58 1 1318 448 16 33 0 chr15 96087246 96087307 -7407667 + (GA)n Simple_repeat Simple_repeat 1 63 0 1 1318 594 165 0 0 chr15 96087335 96087438 -7407536 + B1_Mur1 SINE Alu 47 149 0 1 1318 477 231 276 6 chr15 96087468 96087638 -7407336 + B3 SINE B2 1 216 0 1 1318 242 209 75 50 chr15 96087862 96087959 -7407015 + PB1D7 SINE Alu 1 101 -19 1 1318 1144 54 0 20 chr15 96087992 96088142 -7406832 + B1_Mus1 SINE Alu 2 148 0 1 1318 1196 205 153 24 chr15 96088142 96088521 -7406453 - RMER10A LTR ERVL -14 428 1 1 1318 189 0 0 0 chr15 96088632 96088653 -7406321 + (CG)n Simple_repeat Simple_repeat 2 22 0 1 1318 249 385 35 12 chr15 96088803 96088974 -7406000 + MIR SINE MIR 23 197 -65 1 1318 1444 282 142 26 chr15 96088990 96089779 -7405195 - Lx8 LINE L1 -33 7440 6535 1 1318 933 319 54 18 chr15 96089801 96090190 -7404784 - Lx8 LINE L1 -1014 6459 6057 1 1318 327 49 0 0 chr15 96090205 96090246 -7404728 + (TTCTCC)n Simple_repeat Simple_repeat 3 43 0 1 1318 207 0 0 0 chr15 96090319 96090342 -7404632 + (AGCTG)n Simple_repeat Simple_repeat 1 23 0 1 1318 4207 110 73 33 chr15 96090668 96090952 -7404022 - RMER6A LTR ERVK -4 752 451 1 1318 1235 127 5 11 chr15 96090952 96091143 -7403831 - B2_Mm2 SINE B2 -5 190 1 1 1318 4207 110 73 33 chr15 96091143 96091580 -7403394 - RMER6A LTR ERVK -306 450 2 1 1318 3418 38 2 0 chr15 96091748 96092142 -7402832 - MTA_Mm LTR MaLR 0 396 2 1 1318 1216 326 42 42 chr15 96092329 96093181 -7401793 - Lx8 LINE L1 -182 5698 4847 1 1318 1196 120 0 17 chr15 96093795 96093973 -7401001 + B2_Mm2 SINE B2 2 176 -19 1 1318 479 238 29 0 chr15 96094064 96094169 -7400805 + B1_Mur2 SINE Alu 28 135 -14 1 1318 234 281 74 46 chr15 96094303 96094411 -7400563 - HAL1 LINE L1 -1097 1410 1300 1 1318 297 0 0 0 chr15 96094483 96094516 -7400458 + (A)n Simple_repeat Simple_repeat 1 33 0 1 1318 1091 70 28 0 chr15 96094526 96094669 -7400305 + B1_Mus1 SINE Alu 2 148 0 1 1318 475 208 0 56 chr15 96094877 96094984 -7399990 - RSINE1 SINE B4 -62 103 3 1 1318 378 61 0 0 chr15 96095399 96095448 -7399526 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1318 242 298 84 42 chr15 96095454 96095573 -7399401 - L1MEd LINE L1 -5994 125 2 1 1318 377 269 18 53 chr15 96095922 96095982 -7398992 - B3A SINE B2 -88 110 49 1 1318 432 0 0 0 chr15 96095982 96096030 -7398944 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1318 377 269 18 53 chr15 96096030 96096083 -7398891 - B3A SINE B2 -150 48 1 1 1318 2641 168 109 71 chr15 96097276 96097865 -7397109 + RMER19C LTR ERVK 1 611 0 1 1318 204 216 0 0 chr15 96099605 96099656 -7395318 + CT-rich Low_complexity Low_complexity 3 53 0 1 1318 358 208 30 30 chr15 96099835 96099934 -7395040 - B3 SINE B2 -2 214 116 1 1318 463 250 20 27 chr15 96099971 96100119 -7394855 + B1F SINE Alu 3 149 0 1 1318 22 56 0 0 chr15 96100240 96100276 -7394698 + AT_rich Low_complexity Low_complexity 1 36 0 1 1318 1085 247 126 3 chr15 96100627 96100952 -7394022 - ORR1D1 LTR MaLR -6 368 4 1 1318 24 0 0 0 chr15 96101378 96101402 -7393572 + AT_rich Low_complexity Low_complexity 1 24 0 1 1318 225 0 0 0 chr15 96101905 96101930 -7393044 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1318 180 0 0 0 chr15 96103767 96103787 -7391187 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1318 564 211 0 9 chr15 96103853 96103963 -7391011 - B3 SINE B2 -100 116 8 2 1318 290 173 84 24 chr15 96103982 96104065 -7390909 + B3 SINE B2 129 216 0 2 1318 1239 34 0 0 chr15 96104285 96104431 -7390543 - B1_Mus1 SINE Alu 0 148 3 2 1318 345 276 46 36 chr15 96105844 96106037 -7388937 - Lx9 LINE L1 -200 5956 5704 2 1318 913 162 52 5 chr15 96106096 96106288 -7388686 + URR1A DNA MER1_type 25 225 -1 2 1318 269 248 113 89 chr15 96107853 96108021 -7386953 - MLT1A0 LTR MaLR -182 183 12 2 1318 670 163 16 0 chr15 96109021 96109144 -7385830 - B1_Mur3 SINE Alu -3 146 22 2 1318 219 121 0 0 chr15 96109305 96109338 -7385636 + B1F2 SINE Alu 6 38 -111 2 1318 429 258 107 67 chr15 96109353 96109623 -7385351 + RLTR15 LTR ERVK 14 294 -65 2 1318 197 65 32 0 chr15 96109770 96109801 -7385173 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1318 3563 166 91 57 chr15 96109858 96110756 -7384218 - RMER19B LTR ERVK -12 890 1 2 1318 327 235 57 29 chr15 96110776 96110881 -7384093 + PB1D10 SINE Alu 4 111 -6 2 1318 1533 168 146 16 chr15 96111826 96112189 -7382785 + RMER17C LTR ERVK 1 410 0 2 1318 21 0 0 0 chr15 96112556 96112577 -7382397 + AT_rich Low_complexity Low_complexity 1 21 0 2 1318 270 0 0 0 chr15 96112654 96112684 -7382290 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1318 249 209 16 97 chr15 96112902 96113008 -7381966 - B1F1 SINE Alu -6 143 1 2 1318 22 0 0 0 chr15 96114080 96114102 -7380872 + AT_rich Low_complexity Low_complexity 1 22 0 2 1318 217 216 180 30 chr15 96116412 96116512 -7378462 + MIR SINE MIR 41 155 -107 2 1318 22 0 0 0 chr15 96117061 96117083 -7377891 + GC_rich Low_complexity Low_complexity 1 22 0 2 1318 24 85 0 0 chr15 96117273 96117332 -7377642 + GC_rich Low_complexity Low_complexity 1 59 0 2 1318 180 125 0 0 chr15 96117345 96117377 -7377597 + (CAGG)n Simple_repeat Simple_repeat 2 33 0 2 1318 180 0 0 0 chr15 96117427 96117447 -7377527 + (CCG)n Simple_repeat Simple_repeat 3 22 0 2 1318 257 0 30 0 chr15 96117564 96117597 -7377377 + (CCG)n Simple_repeat Simple_repeat 3 36 0 2 1318 24 91 0 0 chr15 96117610 96117676 -7377298 + GC_rich Low_complexity Low_complexity 1 66 0 2 1318 29 84 0 0 chr15 96117743 96117814 -7377160 + GC_rich Low_complexity Low_complexity 1 71 0 2 1318 204 113 18 54 chr15 96117895 96117951 -7377023 + C-rich Low_complexity Low_complexity 4 57 0 2 1318 375 23 0 0 chr15 96117953 96117997 -7376977 + (CCG)n Simple_repeat Simple_repeat 1 44 0 2 1318 30 69 0 0 chr15 96118229 96118287 -7376687 + GC_rich Low_complexity Low_complexity 1 58 0 2 1318 37 97 0 0 chr15 96118604 96118718 -7376256 + GC_rich Low_complexity Low_complexity 1 114 0 2 1318 189 68 44 22 chr15 96118726 96118771 -7376203 + (CCCG)n Simple_repeat Simple_repeat 4 49 0 2 1318 22 0 0 0 chr15 96119078 96119100 -7375874 + GC_rich Low_complexity Low_complexity 1 22 0 2 1318 606 215 0 0 chr15 96121570 96121705 -7373269 + (TA)n Simple_repeat Simple_repeat 1 135 0 2 1318 252 256 58 28 chr15 96121941 96122050 -7372924 - B1F1 SINE Alu 0 117 1 2 1318 1172 82 0 0 chr15 96122106 96122253 -7372721 - B1_Mm SINE Alu 0 147 1 2 1318 926 156 200 0 chr15 96122644 96122824 -7372150 - B3 SINE B2 0 216 1 2 1318 25 0 0 0 chr15 96122880 96122905 -7372069 + AT_rich Low_complexity Low_complexity 1 25 0 2 1318 827 151 14 21 chr15 96122905 96123047 -7371927 + B1_Mur4 SINE Alu 1 141 -9 2 1318 770 196 7 14 chr15 96123473 96123618 -7371356 + B1_Mur3 SINE Alu 1 144 -5 2 1318 21 0 0 0 chr15 96123631 96123652 -7371322 + AT_rich Low_complexity Low_complexity 1 21 0 2 1318 243 0 0 0 chr15 96123849 96123876 -7371098 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1318 403 327 0 0 chr15 96125476 96125583 -7369391 - PB1D10 SINE Alu -10 107 1 2 1318 451 235 20 20 chr15 96125609 96125709 -7369265 + RSINE1 SINE B4 66 165 0 2 1318 204 179 0 0 chr15 96126230 96126269 -7368705 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2 1318 23 33 0 0 chr15 96126507 96126537 -7368437 + AT_rich Low_complexity Low_complexity 1 30 0 2 1318 393 22 0 0 chr15 96128110 96128156 -7366818 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1318 219 306 14 14 chr15 96128239 96128312 -7366662 + (TG)n Simple_repeat Simple_repeat 1 73 0 2 1318 485 301 15 116 chr15 96128341 96128494 -7366480 - B4A SINE B4 -59 233 103 2 1318 724 174 127 35 chr15 96128494 96128691 -7366283 - B3 SINE B2 0 216 2 2 1318 485 301 15 116 chr15 96128691 96128796 -7366178 - B4A SINE B4 -190 102 1 2 1318 339 250 0 14 chr15 96128999 96129072 -7365902 - ID4_ SINE ID -11 72 1 2 1318 24 32 0 0 chr15 96129851 96129882 -7365092 + AT_rich Low_complexity Low_complexity 1 31 0 2 1318 739 265 43 0 chr15 96129885 96130070 -7364904 - B3A SINE B2 -3 195 3 2 1318 372 289 19 0 chr15 96130572 96130676 -7364298 + B1F SINE Alu 5 110 -39 2 1318 310 272 144 23 chr15 96130700 96130873 -7364101 + B4 SINE B4 7 200 -92 2 1318 310 222 214 0 chr15 96131374 96131500 -7363474 - L1MC4 LINE L1 -634 7408 7256 2 1318 714 255 83 69 chr15 96131745 96132120 -7362854 - L1MC4 LINE L1 -1062 6980 6601 2 1318 273 266 61 50 chr15 96132367 96132466 -7362508 + PB1 SINE Alu 16 115 -12 2 1318 3322 153 75 31 chr15 96133042 96133776 -7361198 - RMER19B LTR ERVK -12 890 20 2 1318 202 260 13 0 chr15 96133884 96133961 -7361013 + (CA)n Simple_repeat Simple_repeat 2 79 0 2 1318 790 170 7 0 chr15 96133999 96134134 -7360840 - B1_Mus2 SINE Alu 0 147 12 2 1318 440 270 67 43 chr15 96134504 96134713 -7360261 - RLTR12B LTR ERVK -312 216 3 2 1318 574 233 103 86 chr15 96134752 96134926 -7360048 + B3 SINE B2 8 184 -11 2 1318 235 261 43 14 chr15 96134937 96135007 -7359967 + ID SINE ID 2 73 -151 2 1318 1583 41 0 25 chr15 96136223 96136421 -7358553 + B2_Mm1a SINE B2 1 193 0 2 1318 194 276 129 8 chr15 96136526 96136650 -7358324 - MIR SINE MIR -43 219 81 2 1318 372 269 13 96 chr15 96136677 96136833 -7358141 + B4A SINE B4 2 144 -148 2 1318 213 311 90 15 chr15 96137690 96137824 -7357150 - ID_B1 SINE B4 0 224 81 2 1318 187 264 108 65 chr15 96138177 96138313 -7356661 - MIR SINE MIR -59 209 61 2 1318 1066 204 136 0 chr15 96138780 96139060 -7355914 + MTD LTR MaLR 1 318 -101 2 1318 427 319 20 50 chr15 96140842 96141043 -7353931 + MER2 DNA MER2_type 138 332 -13 2 1318 4404 30 0 0 chr15 96141446 96141948 -7353026 - L1Md_T LINE L1 -115 6467 5966 2 1318 881 58 0 0 chr15 96141948 96142069 -7352905 + L1Md_A LINE L1 6462 6582 0 2 1318 342 182 0 0 chr15 96142682 96142748 -7352226 + (TA)n Simple_repeat Simple_repeat 1 66 0 2 1318 185 0 0 39 chr15 96142812 96142838 -7352136 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 2 1318 1184 62 0 0 chr15 96142839 96142983 -7351991 - B1_Mus2 SINE Alu 0 147 4 2 1318 23 54 0 0 chr15 96143688 96143725 -7351249 + AT_rich Low_complexity Low_complexity 1 37 0 2 1318 2586 109 47 2 chr15 96143726 96144129 -7350845 - BGLII LTR ERVK 0 421 1 2 1318 3319 190 40 61 chr15 96144136 96145066 -7349908 - RMER3D-int LTR ERVK -5 2837 1928 2 1318 2094 178 65 82 chr15 96145064 96145615 -7349359 - RMER3D-int LTR ERVK -1148 1694 1153 2 1318 265 152 22 0 chr15 96145659 96145705 -7349269 - BGLII LTR ERVK -115 306 260 2 1318 2817 210 82 25 chr15 96146008 96146797 -7348177 - Lx9 LINE L1 -1723 5921 5054 2 1318 198 91 0 0 chr15 96146996 96147029 -7347945 + (T)n Simple_repeat Simple_repeat 1 33 0 2 1318 22 24 0 45 chr15 96147056 96147083 -7347891 + AT_rich Low_complexity Low_complexity 1 27 0 2 1318 1303 87 48 11 chr15 96147083 96147269 -7347705 - B2_Mm1t SINE B2 0 193 1 2 1318 22 24 0 45 chr15 96147269 96147285 -7347689 + AT_rich Low_complexity Low_complexity 1 15 0 2 1318 627 261 42 11 chr15 96147463 96147653 -7347321 - B3 SINE B2 -19 197 2 2 1318 680 268 6 23 chr15 96147796 96147968 -7347006 - B3 SINE B2 -46 170 2 2 1318 310 242 0 0 chr15 96148229 96148291 -7346683 - B1F1 SINE Alu -87 62 1 2 1318 394 276 8 17 chr15 96148900 96149018 -7345956 - B4A SINE B4 -5 287 171 2 1318 207 0 0 0 chr15 96150766 96150789 -7344185 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 1318 180 0 0 0 chr15 96150789 96150808 -7344166 + (CG)n Simple_repeat Simple_repeat 2 21 0 2 1318 439 292 15 0 chr15 96150818 96150948 -7344026 - RSINE1 SINE B4 -33 132 1 2 1318 1114 54 6 58 chr15 96151103 96151259 -7343715 - B1_Mus1 SINE Alu 0 148 1 2 1318 22 35 0 0 chr15 96151536 96151565 -7343409 + AT_rich Low_complexity Low_complexity 1 29 0 2 1318 1661 26 0 20 chr15 96151569 96151766 -7343208 - B2_Mm1a SINE B2 0 193 1 2 1318 957 129 7 0 chr15 96153087 96153234 -7341740 - B1_Mur3 SINE Alu 0 149 2 2 1318 261 21 0 94 chr15 96153520 96153573 -7341401 + (TATATG)n Simple_repeat Simple_repeat 1 48 0 2 1318 459 288 7 28 chr15 96154446 96154589 -7340385 + ID_B1 SINE B4 1 140 -84 2 1318 477 278 7 43 chr15 96154698 96154837 -7340137 - RSINE1 SINE B4 -28 137 4 2 1318 708 219 89 116 chr15 96155213 96155471 -7339503 - RMER20B LTR ERVK 0 627 377 2 1318 2331 158 97 18 chr15 96155524 96156020 -7338954 - RMER19B LTR ERVK -12 890 356 2 1318 735 198 61 9 chr15 96156040 96156297 -7338677 - RMER19B LTR ERVK -675 227 1 2 1318 1291 196 8 15 chr15 96156336 96156601 -7338373 - RMER20B LTR ERVK -364 263 1 2 1318 699 314 61 10 chr15 96156644 96156937 -7338037 + Tigger7 DNA MER2_type 1 308 -2183 2 1318 293 308 53 61 chr15 96156937 96157051 -7337923 + Tigger7 DNA MER2_type 2132 2244 -247 2 1318 349 285 61 85 chr15 96157099 96157429 -7337545 + RLTR15 LTR ERVK 1 322 -37 2 1318 276 255 39 48 chr15 96158470 96158573 -7336401 - B1F2 SINE Alu -7 142 41 2 1318 1722 10 0 20 chr15 96159108 96159305 -7335669 + B2_Mm1a SINE B2 1 193 0 3 1318 26 64 0 0 chr15 96160122 96160169 -7334805 + AT_rich Low_complexity Low_complexity 1 47 0 3 1318 608 246 268 7 chr15 96160548 96160772 -7334202 + L1MB5 LINE L1 5607 5893 -281 3 1318 231 36 0 0 chr15 96160772 96160800 -7334174 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1318 608 246 268 7 chr15 96160800 96160870 -7334104 + L1MB5 LINE L1 5894 5978 -196 3 1318 340 278 111 28 chr15 96162132 96162384 -7332590 - Charlie25 DNA MER1_type -1926 598 326 3 1318 254 315 31 61 chr15 96164323 96164421 -7330553 - ID_B1 SINE B4 -118 106 12 3 1318 263 285 20 16 chr15 96164344 96164430 -7330544 - ID4 SINE ID -67 85 2 3 1318 26 50 0 0 chr15 96164569 96164609 -7330365 + AT_rich Low_complexity Low_complexity 1 40 0 3 1318 376 312 152 7 chr15 96164886 96165031 -7329943 - ID_B1 SINE B4 -55 169 4 3 1318 21 0 0 0 chr15 96165416 96165437 -7329537 + AT_rich Low_complexity Low_complexity 1 21 0 3 1318 340 269 55 25 chr15 96165744 96165946 -7329028 - L1MEg LINE L1 -2818 3328 3121 3 1318 480 320 23 81 chr15 96166081 96166302 -7328672 - B4A SINE B4 -81 211 4 3 1318 248 286 52 35 chr15 96166492 96166608 -7328366 - L1MEg LINE L1 -4041 2201 2084 3 1318 17274 62 42 13 chr15 96166945 96169487 -7325487 - L1VL4 LINE L1 -206 3353 740 3 1318 1226 72 83 6 chr15 96169487 96169668 -7325306 - B2_Mm2 SINE B2 0 195 1 3 1318 2389 108 39 20 chr15 96169668 96169814 -7325160 - L1VL4 LINE L1 -5563 739 632 3 1318 324 64 0 0 chr15 96170606 96170653 -7324321 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1318 472 241 89 0 chr15 96170690 96170802 -7324172 - RSINE1 SINE B4 -43 122 1 3 1318 1123 133 39 0 chr15 96171144 96171325 -7323649 + B2_Mm2 SINE B2 1 188 -7 3 1318 252 329 0 0 chr15 96171576 96171658 -7323316 - B2_Mm2 SINE B2 -113 82 1 3 1318 285 98 0 0 chr15 96171677 96171718 -7323256 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1318 536 262 61 14 chr15 96171732 96171879 -7323095 - B3A SINE B2 -41 157 4 3 1318 202 73 24 24 chr15 96172325 96172367 -7322607 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 3 1318 970 40 0 0 chr15 96172809 96172935 -7322039 + B1_Mus2 SINE Alu 9 134 -13 3 1318 367 242 79 58 chr15 96172988 96173177 -7321797 - B3A SINE B2 0 195 3 3 1318 2430 80 9 0 chr15 96173177 96173501 -7321473 - ORR1A2 LTR MaLR 0 327 1 3 1318 23 0 0 0 chr15 96174329 96174352 -7320622 + AT_rich Low_complexity Low_complexity 1 23 0 3 1318 1632 31 0 20 chr15 96174359 96174556 -7320418 + B2_Mm1a SINE B2 1 193 0 3 1318 21 36 0 0 chr15 96174796 96174824 -7320150 + AT_rich Low_complexity Low_complexity 1 28 0 3 1318 369 0 0 0 chr15 96175140 96175181 -7319793 + (TCCCC)n Simple_repeat Simple_repeat 4 44 0 3 1318 318 264 136 0 chr15 96175241 96175351 -7319623 - Lx9 LINE L1 -978 6666 6542 3 1318 258 174 43 0 chr15 96175396 96175442 -7319532 - Lx9 LINE L1 -848 6796 6749 3 1318 612 181 304 0 chr15 96175455 96175633 -7319341 - Lx9 LINE L1 -972 6672 6441 3 1318 2421 239 81 43 chr15 96175660 96176523 -7318451 - Lx9 LINE L1 -1728 5916 4986 3 1318 603 165 0 0 chr15 96176923 96177032 -7317942 + C-rich Low_complexity Low_complexity 4 112 0 3 1318 1389 237 100 33 chr15 96177202 96177414 -7317560 - Lx9 LINE L1 -885 4962 4717 3 1318 351 0 0 0 chr15 96177414 96177453 -7317521 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 1318 288 0 0 0 chr15 96177453 96177484 -7317490 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1318 1389 237 100 33 chr15 96177484 96177728 -7317246 - Lx9 LINE L1 -1131 4716 4475 3 1318 300 111 0 0 chr15 96179023 96179068 -7315906 + (TTAG)n Simple_repeat Simple_repeat 3 47 0 3 1318 189 0 0 0 chr15 96179442 96179463 -7315511 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3 1318 1314 84 11 0 chr15 96179463 96179641 -7315333 - B2_Mm1t SINE B2 -13 180 1 3 1318 1517 152 102 2 chr15 96179691 96180017 -7314957 - MTC LTR MaLR -53 366 1 3 1318 462 226 54 39 chr15 96181587 96181716 -7313258 + MTD LTR MaLR 283 413 -6 3 1318 312 302 19 0 chr15 96181734 96181840 -7313134 - PB1D10 SINE Alu -8 109 2 3 1318 213 65 0 0 chr15 96182398 96182429 -7312545 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 3 1318 329 255 60 20 chr15 96182697 96182797 -7312177 + B4A SINE B4 1 104 -188 3 1318 3465 152 146 58 chr15 96182864 96183693 -7311281 + RMER19B LTR ERVK 1 902 0 3 1318 260 181 28 0 chr15 96183767 96183839 -7311135 + (CATATA)n Simple_repeat Simple_repeat 1 74 0 3 1318 232 284 218 9 chr15 96184634 96184744 -7310230 - RSINE1 SINE B4 -22 143 11 3 1318 390 269 59 0 chr15 96185131 96185250 -7309724 - B4A SINE B4 -10 282 157 3 1318 928 152 14 0 chr15 96185953 96186098 -7308876 + B1_Mus2 SINE Alu 1 147 0 3 1318 572 299 179 10 chr15 96186258 96186708 -7308266 + L1ME1 LINE L1 5498 6027 -152 3 1318 24 0 0 0 chr15 96186859 96186883 -7308091 + AT_rich Low_complexity Low_complexity 1 24 0 3 1318 240 239 27 40 chr15 96188265 96188339 -7306635 + PB1D9 SINE Alu 41 113 -7 3 1318 180 0 0 0 chr15 96188347 96188367 -7306607 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 3 1318 289 255 68 10 chr15 96188397 96188500 -7306474 + B4A SINE B4 2 110 -182 3 1318 268 310 59 86 chr15 96188833 96188856 -7306118 - B2_Mm2 SINE B2 -10 185 162 3 1318 282 29 0 0 chr15 96188856 96188891 -7306083 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1318 414 286 68 47 chr15 96188891 96189054 -7305920 - B3 SINE B2 -34 161 4 3 1318 215 262 0 0 chr15 96189074 96189116 -7305858 - ID4 SINE ID -3 80 39 3 1318 347 286 147 45 chr15 96190037 96190392 -7304582 - L1MEc LINE L1 -4876 1611 1221 3 1318 586 259 88 39 chr15 96190451 96190632 -7304342 - B3 SINE B2 -1 194 5 3 1318 252 257 143 0 chr15 96190892 96190997 -7303977 - L1MEc LINE L1 -5172 1237 1118 3 1318 268 302 48 97 chr15 96191581 96191808 -7303166 - Charlie4a DNA MER1_type -292 216 1 3 1318 231 36 0 0 chr15 96192715 96192743 -7302231 + (TTCC)n Simple_repeat Simple_repeat 4 31 0 3 1318 670 250 91 24 chr15 96193179 96193388 -7301586 - ID_B1 SINE B4 0 224 2 3 1318 1215 55 11 32 chr15 96194961 96195148 -7299826 - MTA_Mm LTR MaLR -7 389 207 3 1318 2049 52 78 44 chr15 96195144 96195463 -7299511 - MT2C_Mm LTR ERVL -145 330 1 3 1318 468 0 0 0 chr15 96196060 96196112 -7298862 + (TTCTC)n Simple_repeat Simple_repeat 3 54 0 3 1318 289 335 80 13 chr15 96196237 96196388 -7298586 - MER5A DNA MER1_type -2 187 27 3 1318 24 32 0 0 chr15 96196567 96196598 -7298376 + AT_rich Low_complexity Low_complexity 1 31 0 3 1318 267 228 151 47 chr15 96197719 96197825 -7297149 - PB1D10 SINE Alu 0 117 1 3 1318 21 0 0 0 chr15 96198670 96198691 -7296283 + AT_rich Low_complexity Low_complexity 1 21 0 3 1318 234 253 151 35 chr15 96200005 96200091 -7294883 - PB1D10 SINE Alu -1 116 21 3 1318 237 194 14 14 chr15 96201470 96201543 -7293431 + (CAG)n Simple_repeat Simple_repeat 3 75 0 3 1318 224 313 15 15 chr15 96204190 96204258 -7290716 + ID4_ SINE ID 2 69 -14 3 1318 24 32 0 0 chr15 96204685 96204716 -7290258 + AT_rich Low_complexity Low_complexity 1 31 0 3 1318 250 23 85 85 chr15 96205175 96205222 -7289752 + RMER17C-int LTR ERVK 2875 2921 -317 3 1318 1109 58 0 7 chr15 96205586 96205726 -7289248 + B1_Mus1 SINE Alu 2 140 -8 3 1318 612 211 157 7 chr15 96205941 96206094 -7288880 - B3 SINE B2 -2 214 39 3 1319 359 228 87 0 chr15 96207142 96207234 -7287740 + RSINE1 SINE B4 65 164 -1 3 1319 336 200 0 0 chr15 96207241 96207321 -7287653 + (CA)n Simple_repeat Simple_repeat 1 80 0 3 1319 397 239 76 8 chr15 96207597 96207715 -7287259 - ID_B1 SINE B4 0 224 99 3 1319 250 185 19 0 chr15 96207720 96207774 -7287200 + ID4 SINE ID 17 71 -12 3 1319 328 268 70 16 chr15 96208278 96208407 -7286567 + B1F SINE Alu 1 136 -13 3 1319 207 0 0 0 chr15 96209408 96209431 -7285543 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 1319 717 189 38 0 chr15 96209667 96209799 -7285175 + B1_Mur1 SINE Alu 1 137 -12 3 1319 373 216 86 29 chr15 96209832 96209937 -7285037 + PB1D7 SINE Alu 5 115 -5 3 1319 478 108 12 12 chr15 96210169 96210253 -7284721 + (TG)n Simple_repeat Simple_repeat 1 84 0 3 1319 224 274 122 31 chr15 96210312 96210410 -7284564 - B4A SINE B4 -185 107 1 3 1319 242 29 0 28 chr15 96210841 96210877 -7284097 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1319 234 281 0 58 chr15 96211066 96211153 -7283821 - ID4 SINE ID 0 83 2 3 1319 990 118 0 0 chr15 96211156 96211308 -7283666 + (TCCC)n Simple_repeat Simple_repeat 3 154 0 3 1319 186 43 0 0 chr15 96212368 96212391 -7282583 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1319 1283 14 0 0 chr15 96212391 96212537 -7282437 - B1_Mus2 SINE Alu 0 147 2 3 1319 591 242 90 12 chr15 96212621 96212788 -7282186 - B3 SINE B2 -20 196 17 3 1319 1279 313 85 16 chr15 96212827 96213402 -7281572 - Lx8 LINE L1 -272 7201 6587 3 1319 366 219 0 0 chr15 96213513 96213586 -7281388 - RSINE1 SINE B4 -90 75 3 3 1319 235 160 40 0 chr15 96213751 96213801 -7281173 - PB1D9 SINE Alu -66 54 3 3 1319 734 183 291 18 chr15 96214210 96214433 -7280541 + Lx9 LINE L1 7085 7368 -276 3 1319 405 0 0 0 chr15 96214450 96214495 -7280479 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1319 192 254 0 0 chr15 96214543 96214602 -7280372 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 3 1319 651 152 8 0 chr15 96214627 96214745 -7280229 + MTC LTR MaLR 294 412 -7 3 1319 6241 145 91 29 chr15 96214745 96215725 -7279249 + MTC-int LTR MaLR 2 1044 -214 3 1319 1391 91 16 0 chr15 96215725 96215912 -7279062 - B2_Mm2 SINE B2 -4 191 2 3 1319 6241 145 91 29 chr15 96215912 96216113 -7278861 + MTC-int LTR MaLR 1045 1256 -2 3 1319 1572 157 73 7 chr15 96216119 96216421 -7278553 + MTC LTR MaLR 92 413 -8 3 1319 370 192 155 31 chr15 96216425 96216554 -7278420 + Lx9 LINE L1 7493 7637 -7 3 1319 252 300 54 22 chr15 96216753 96216845 -7278129 - B1_Mur1 SINE Alu -2 147 53 3 1319 326 311 89 12 chr15 96216885 96217054 -7277920 - B3A SINE B2 -13 185 4 3 1319 256 191 44 0 chr15 96218377 96218445 -7276529 + (TAGA)n Simple_repeat Simple_repeat 1 71 0 3 1319 263 183 220 70 chr15 96218812 96218912 -7276062 + PB1D10 SINE Alu 3 117 0 4 1319 245 284 179 36 chr15 96219515 96219599 -7275375 - PB1D10 SINE Alu -11 106 11 4 1319 492 150 190 0 chr15 96219987 96220087 -7274887 + PB1D9 SINE Alu 2 120 0 4 1319 794 238 19 42 chr15 96220924 96221139 -7273835 + B3 SINE B2 1 210 -6 4 1319 23 68 0 0 chr15 96222052 96222096 -7272878 + AT_rich Low_complexity Low_complexity 1 44 0 4 1319 304 186 128 49 chr15 96222578 96222680 -7272294 + PB1D10 SINE Alu 3 112 -5 4 1319 270 56 0 0 chr15 96223257 96223293 -7271681 + (A)n Simple_repeat Simple_repeat 1 36 0 4 1319 612 165 25 8 chr15 96223597 96223719 -7271255 - URR1B DNA MER1_type -1 224 101 4 1319 3978 62 21 6 chr15 96223734 96224253 -7270721 - L1_Mus1 LINE L1 0 6567 6041 4 1319 1095 189 33 33 chr15 96224669 96224943 -7270031 - RMER17C LTR ERVK 0 410 137 4 1319 378 0 0 0 chr15 96224947 96224989 -7269985 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1319 2285 264 45 43 chr15 96224994 96225847 -7269127 - Lx9 LINE L1 -211 7433 6580 4 1319 2246 242 129 45 chr15 96225838 96227067 -7267907 + L1_Rod LINE L1 4512 5843 -4 4 1319 215 245 0 20 chr15 96227431 96227481 -7267493 + CT-rich Low_complexity Low_complexity 3 51 0 4 1319 1072 191 29 5 chr15 96227482 96227692 -7267282 - B3 SINE B2 0 216 2 4 1319 293 250 0 0 chr15 96228675 96228727 -7266247 - B3 SINE B2 -51 165 114 4 1319 297 304 129 26 chr15 96228857 96229205 -7265769 + L1M3 LINE L1 4892 5275 -865 4 1319 294 324 49 7 chr15 96229464 96229607 -7265367 - CYRA11_Mm Unknown Y-chromosome -296 321 173 4 1319 655 165 31 0 chr15 96229482 96229609 -7265365 + URR1B DNA MER1_type 95 225 0 4 1319 680 176 203 40 chr15 96230029 96230206 -7264768 + B3 SINE B2 2 207 -9 4 1319 259 231 0 25 chr15 96230436 96230516 -7264458 - L1MA6 LINE L1 -6 6294 6217 4 1319 543 171 9 43 chr15 96231162 96231278 -7263696 + PB1D9 SINE Alu 9 120 0 4 1319 213 281 18 0 chr15 96231342 96231399 -7263575 + PB1D10 SINE Alu 52 109 -8 4 1319 504 72 0 0 chr15 96231882 96231951 -7263023 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 1319 315 0 0 0 chr15 96231951 96231985 -7262989 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 1319 251 68 0 64 chr15 96232706 96232753 -7262221 + (A)n Simple_repeat Simple_repeat 1 44 0 4 1319 228 191 0 0 chr15 96235329 96235371 -7259603 + MARNA DNA Mariner 199 240 -346 4 1319 241 306 49 13 chr15 96235876 96235975 -7258999 + B4A SINE B4 7 107 -185 4 1319 670 174 50 0 chr15 96236565 96236686 -7258288 + B1_Mur2 SINE Alu 18 144 -5 4 1319 310 355 7 22 chr15 96237113 96237251 -7257723 + ID_B1 SINE B4 87 222 -2 4 1319 342 0 0 0 chr15 96237398 96237436 -7257538 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 1319 221 287 136 11 chr15 96238310 96238398 -7256576 + PB1D7 SINE Alu 12 110 -10 4 1319 243 0 0 0 chr15 96238568 96238595 -7256379 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1319 1271 20 0 0 chr15 96238595 96238742 -7256232 - B1_Mus2 SINE Alu 0 147 1 4 1319 310 189 42 42 chr15 96238909 96238981 -7255993 - ID4 SINE ID -8 75 4 4 1319 373 254 8 109 chr15 96239900 96240028 -7254946 - B3A SINE B2 -83 115 1 4 1319 289 306 0 53 chr15 96240143 96240219 -7254755 + ID4_ SINE ID 9 80 -3 4 1319 1164 64 0 0 chr15 96240237 96240378 -7254596 + B1_Mus1 SINE Alu 2 142 -6 4 1319 299 216 364 14 chr15 96240837 96240979 -7253995 + B3 SINE B2 1 192 -24 4 1319 213 342 108 0 chr15 96241551 96241662 -7253312 - ID_B1 SINE B4 -18 206 84 4 1319 1136 64 0 0 chr15 96241675 96241816 -7253158 - B1_Mus1 SINE Alu -7 141 1 4 1319 727 190 41 21 chr15 96241886 96242031 -7252943 + B1_Mur1 SINE Alu 2 149 0 4 1319 237 307 92 7 chr15 96242059 96242200 -7252774 + L1M5 LINE L1 5746 5898 -226 4 1319 1149 111 12 0 chr15 96244109 96244281 -7250693 - B2_Mm1t SINE B2 -19 174 1 4 1319 1344 95 11 0 chr15 96245773 96245963 -7249011 - B2_Mm1t SINE B2 -1 192 1 4 1319 653 214 30 8 chr15 96246596 96246728 -7248246 + RSINE1 SINE B4 2 136 -29 4 1319 363 73 0 0 chr15 96246749 96246804 -7248170 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1319 241 236 308 9 chr15 96247833 96247940 -7247034 + B1_Mur2 SINE Alu 11 149 0 4 1319 396 236 44 22 chr15 96248203 96248294 -7246680 + B1_Mur1 SINE Alu 37 129 -20 4 1319 233 172 35 0 chr15 96249252 96249310 -7245664 + CT-rich Low_complexity Low_complexity 2 61 0 4 1319 449 271 0 54 chr15 96251453 96251582 -7243392 - ID_B1 SINE B4 -21 203 82 4 1319 281 276 51 1 chr15 96252081 96252218 -7242756 - L1MA9 LINE L1 -367 5933 5788 4 1319 22 56 0 0 chr15 96252577 96252613 -7242361 + AT_rich Low_complexity Low_complexity 1 36 0 4 1319 365 257 148 44 chr15 96252815 96252998 -7241976 + B3 SINE B2 2 203 -13 4 1319 1024 52 0 0 chr15 96255877 96256011 -7238963 - B1_Mus1 SINE Alu 0 148 15 4 1319 304 307 118 11 chr15 96256108 96256286 -7238688 - B3A SINE B2 0 198 2 4 1319 259 381 89 19 chr15 96256442 96256600 -7238374 - B4A SINE B4 -122 170 2 4 1319 746 194 0 65 chr15 96257038 96257192 -7237782 - B1_Mus1 SINE Alu -4 144 1 4 1319 505 244 190 97 chr15 96257538 96257733 -7237241 + B3 SINE B2 1 213 -3 4 1319 216 365 21 35 chr15 96257885 96258027 -7236947 - B1_Mus1 SINE Alu 0 148 9 4 1319 209 196 18 0 chr15 96258502 96258558 -7236416 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1319 246 314 14 0 chr15 96258779 96258849 -7236125 + BC1_Mm scRNA scRNA 2 72 -80 4 1319 1155 68 0 0 chr15 96259367 96259514 -7235460 + B1_Mus2 SINE Alu 1 147 0 4 1319 449 284 44 15 chr15 96259536 96259672 -7235302 + B1_Mur2 SINE Alu 10 149 0 4 1319 795 185 20 0 chr15 96259697 96259843 -7235131 + B1_Mur4 SINE Alu 1 149 -1 4 1319 253 312 53 21 chr15 96260268 96260363 -7234611 + RLTR20B2 LTR ERVK 102 199 -361 4 1319 1608 131 111 12 chr15 96260368 96260692 -7234282 + RLTR15 LTR ERVK 4 359 0 4 1319 286 257 0 67 chr15 96260957 96261032 -7233942 + tRNA-Ala-GCY_ tRNA tRNA 1 70 -5 4 1319 876 298 10 30 chr15 96261185 96261483 -7233491 + B4A SINE B4 1 292 0 4 1319 878 241 166 34 chr15 96264179 96264626 -7230348 + Lx9 LINE L1 7139 7644 0 4 1319 986 109 66 33 chr15 96264746 96264927 -7230047 - B2_Mm2 SINE B2 -8 187 1 4 1319 26 88 0 0 chr15 96266729 96266797 -7228177 + AT_rich Low_complexity Low_complexity 1 68 0 4 1319 807 56 105 8 chr15 96268072 96268201 -7226773 - B1_Mus1 SINE Alu 0 148 5 4 1319 22 88 0 0 chr15 96268305 96268362 -7226612 + AT_rich Low_complexity Low_complexity 1 57 0 4 1319 862 126 42 48 chr15 96269737 96269904 -7225070 + B2_Mm2 SINE B2 1 166 -29 4 1319 875 247 11 0 chr15 96270392 96270566 -7224408 - B3 SINE B2 -39 177 2 4 1319 474 262 56 0 chr15 96270779 96270905 -7224069 - B1F1 SINE Alu -16 133 1 4 1319 234 309 92 83 chr15 96271862 96272042 -7222932 + CYRA11_Mm Unknown Y-chromosome 1 175 -442 4 1319 1914 110 9 56 chr15 96272042 96272380 -7222594 + RLTRETN_Mm LTR ERVK 1 322 0 4 1319 234 309 92 83 chr15 96272380 96272524 -7222450 + CYRA11_Mm Unknown Y-chromosome 176 328 -289 4 1319 692 172 90 32 chr15 96272524 96272536 -7222438 - URR1B DNA MER1_type -5 220 56 4 1319 700 287 7 13 chr15 96272773 96272925 -7222049 + B3A SINE B2 1 151 -47 4 1319 324 0 0 0 chr15 96272930 96272966 -7222008 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1319 198 0 0 0 chr15 96273269 96273291 -7221683 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 1319 184 172 34 22 chr15 96274714 96274803 -7220171 + (TG)n Simple_repeat Simple_repeat 1 90 0 4 1319 256 299 15 15 chr15 96274806 96274874 -7220100 - tRNA-Ala-GCY_ tRNA tRNA -5 70 3 4 1319 22 0 0 0 chr15 96274928 96274950 -7220024 + AT_rich Low_complexity Low_complexity 1 22 0 4 1319 342 0 0 0 chr15 96275050 96275088 -7219886 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 1319 1230 47 0 0 chr15 96275100 96275248 -7219726 - B1_Mus1 SINE Alu 0 148 1 4 1319 775 208 7 0 chr15 96275320 96275464 -7219510 + B1_Mus1 SINE Alu 1 145 -3 4 1319 298 307 0 0 chr15 96275482 96275557 -7219417 - PB1D10 SINE Alu -37 80 6 4 1319 235 283 16 48 chr15 96275696 96275759 -7219215 - ID SINE ID -149 75 15 4 1319 719 201 104 0 chr15 96275831 96275965 -7219009 + B1_Mus1 SINE Alu 1 148 0 4 1319 273 217 0 42 chr15 96276297 96276369 -7218605 + B3 SINE B2 148 216 0 4 1319 770 286 132 35 chr15 96276427 96276684 -7218290 + B4 SINE B4 8 289 -3 4 1319 228 185 0 0 chr15 96276693 96276747 -7218227 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1319 222 62 0 0 chr15 96276760 96276792 -7218182 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 4 1319 445 279 40 32 chr15 96277374 96277500 -7217474 + MTEa LTR MaLR 17 143 -236 4 1319 461 281 22 45 chr15 96277527 96277706 -7217268 + MTEa LTR MaLR 205 379 0 4 1319 889 251 74 35 chr15 96277863 96278274 -7216700 - L1MC1 LINE L1 -93 6240 5851 4 1319 396 224 176 7 chr15 96278384 96278532 -7216442 - L1MA4 LINE L1 -315 5988 5816 4 1319 395 149 0 13 chr15 96278748 96278823 -7216151 + (CA)n Simple_repeat Simple_repeat 1 74 0 4 1319 3592 154 73 184 chr15 96278903 96279916 -7215058 + RMER19B LTR ERVK 1 901 -1 5 1319 196 274 16 31 chr15 96279935 96279999 -7214975 + L4 LINE RTE 1967 2029 0 5 1319 1490 41 0 107 chr15 96280441 96280657 -7214317 - B2_Mm1a SINE B2 0 193 1 5 1319 323 274 108 25 chr15 96280962 96281082 -7213892 + L1MC LINE L1 4897 5026 -1120 5 1319 599 194 342 6 chr15 96281082 96281243 -7213731 - URR1A DNA MER1_type -4 222 8 5 1319 336 211 70 44 chr15 96281312 96281426 -7213548 + L1M2 LINE L1 5153 5269 -874 5 1319 503 99 0 0 chr15 96281436 96281510 -7213464 - L1_Mm LINE L1 -1304 4842 4740 5 1319 3746 58 2 6 chr15 96281510 96281977 -7212997 + L1_Mus1 LINE L1 6102 6566 -1 5 1319 2036 4 0 0 chr15 96282921 96283146 -7211828 + L1Md_A LINE L1 6358 6582 0 5 1319 489 130 26 0 chr15 96283387 96283464 -7211510 - B3 SINE B2 -135 81 3 5 1319 243 0 0 0 chr15 96284116 96284143 -7210831 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 5 1319 888 180 128 20 chr15 96284294 96284498 -7210476 - URR1A DNA MER1_type 0 226 1 5 1319 229 156 102 82 chr15 96284505 96284554 -7210420 + B4 SINE B4 23 72 -220 5 1319 1369 65 38 5 chr15 96284916 96285102 -7209872 + B2_Mm2 SINE B2 1 192 -3 5 1319 338 284 253 33 chr15 96285254 96285436 -7209538 + L1MC4 LINE L1 7589 7810 -232 5 1319 243 242 89 151 chr15 96285447 96285556 -7209418 + B4A SINE B4 111 220 -72 5 1319 266 50 0 24 chr15 96285556 96285597 -7209377 + (CAA)n Simple_repeat Simple_repeat 2 41 0 5 1319 243 242 89 151 chr15 96285604 96285633 -7209341 + B4A SINE B4 221 247 -45 5 1319 579 167 353 0 chr15 96285771 96285927 -7209047 + URR1B DNA MER1_type 1 211 -14 5 1319 214 229 21 0 chr15 96286017 96286065 -7208909 - BC1_Mm scRNA scRNA -103 49 1 5 1319 243 270 159 18 chr15 96286360 96286473 -7208501 + MIRb SINE MIR 104 232 -36 5 1319 228 282 187 28 chr15 96287172 96287196 -7207778 + B3 SINE B2 3 30 -186 5 1319 204 40 0 0 chr15 96287196 96287221 -7207753 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 5 1319 228 282 187 28 chr15 96287221 96287378 -7207596 + B3 SINE B2 31 212 -4 5 1319 209 325 24 12 chr15 96287521 96287605 -7207369 - L2a LINE L2 -8 3418 3334 5 1319 466 277 138 0 chr15 96287609 96287739 -7207235 + RSINE1 SINE B4 3 150 -15 5 1319 218 303 116 62 chr15 96287761 96287986 -7206988 - L2a LINE L2 -86 3340 3104 5 1319 221 316 183 61 chr15 96287963 96288209 -7206765 - L2a LINE L2 -455 2964 2689 5 1319 760 277 17 16 chr15 96288580 96288770 -7206204 + B3A SINE B2 1 191 -4 5 1319 377 186 0 14 chr15 96288790 96288861 -7206113 + PB1D10 SINE Alu 17 86 -31 5 1319 339 219 17 125 chr15 96288861 96288883 -7206091 + MT2B LTR ERVL 162 204 -397 5 1319 650 221 13 46 chr15 96288883 96289035 -7205939 + B1_Mus1 SINE Alu 2 148 0 5 1319 935 131 7 0 chr15 96289507 96289644 -7205330 + B1_Mus1 SINE Alu 5 142 -6 5 1319 21 0 0 0 chr15 96289888 96289909 -7205065 + AT_rich Low_complexity Low_complexity 1 21 0 5 1319 225 202 0 101 chr15 96290775 96290874 -7204100 + (CCCCG)n Simple_repeat Simple_repeat 5 93 0 5 1319 204 205 38 25 chr15 96290944 96291024 -7203950 + (CCCCG)n Simple_repeat Simple_repeat 2 82 0 5 1319 221 170 0 21 chr15 96290958 96291006 -7203968 + (CCGCG)n Simple_repeat Simple_repeat 1 47 0 5 1319 189 107 0 0 chr15 96291269 96291297 -7203677 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 5 1319 216 0 0 0 chr15 96291344 96291368 -7203606 + (CGGG)n Simple_repeat Simple_repeat 4 27 0 5 1319 21 0 0 0 chr15 96292963 96292984 -7201990 + AT_rich Low_complexity Low_complexity 1 21 0 5 1319 513 243 193 59 chr15 96293070 96293324 -7201650 + B4 SINE B4 2 289 -3 5 1319 716 250 58 19 chr15 96293391 96293599 -7201375 - B3 SINE B2 0 216 1 5 1319 3664 26 28 7 chr15 96294599 96295026 -7199948 - RLTR10C LTR ERVK 0 436 1 5 1319 641 328 228 15 chr15 96296255 96296378 -7198596 - Lx8 LINE L1 0 7473 7340 5 1319 261 0 0 0 chr15 96296378 96296407 -7198567 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1319 641 328 228 15 chr15 96296407 96296762 -7198212 - Lx8 LINE L1 -134 7339 6894 5 1319 2620 141 89 184 chr15 96296894 96297605 -7197369 - RMER19B LTR ERVK -259 643 1 5 1319 1231 108 0 21 chr15 96298062 96298252 -7196722 + B2_Mm2 SINE B2 2 187 -8 5 1319 575 226 238 0 chr15 96298348 96298529 -7196445 - Lx3C LINE L1 0 6976 6753 5 1319 385 332 126 15 chr15 96299673 96299871 -7195103 + L1MC3 LINE L1 4616 4832 -1314 5 1319 491 0 17 0 chr15 96299871 96299930 -7195044 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 1319 385 345 105 13 chr15 96299930 96300021 -7194953 + L1MC3 LINE L1 4833 4934 -1212 5 1319 225 227 104 85 chr15 96300061 96300167 -7194807 - LTR81C LTR ERV1? -125 1028 921 5 1319 978 244 62 121 chr15 96300107 96300454 -7194520 - MT2A LTR ERVL -146 455 1 5 1319 355 273 56 21 chr15 96300583 96300725 -7194249 - L1M2 LINE L1 -1158 4985 4839 5 1319 407 189 27 0 chr15 96300733 96300807 -7194167 + B1_Mur4 SINE Alu 11 86 -64 5 1319 324 0 0 0 chr15 96300897 96300933 -7194041 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1319 872 280 22 67 chr15 96300957 96301355 -7193619 - L1M2 LINE L1 -1356 4787 4406 5 1319 219 69 0 0 chr15 96301355 96301384 -7193590 + (TTAA)n Simple_repeat Simple_repeat 1 29 0 5 1319 1200 54 0 0 chr15 96302024 96302171 -7192803 + B1_Mm SINE Alu 1 147 0 5 1319 330 87 0 0 chr15 96302173 96302219 -7192755 + (GAAA)n Simple_repeat Simple_repeat 1 46 0 5 1319 363 337 53 81 chr15 96302219 96302658 -7192316 + L1MC3 LINE L1 5662 6111 -1674 5 1319 537 288 34 11 chr15 96302658 96302837 -7192137 + B3A SINE B2 1 183 -15 5 1319 363 337 53 81 chr15 96302837 96302904 -7192070 + L1MC3 LINE L1 6112 6154 -1631 5 1319 2479 68 3 58 chr15 96302926 96303268 -7191706 - ORR1A2 LTR MaLR -4 323 1 5 1319 1053 187 102 0 chr15 96303268 96303514 -7191460 + Lx9 LINE L1 7366 7636 -8 5 1319 1090 292 124 18 chr15 96303744 96304357 -7190617 + L1MC3 LINE L1 6423 7100 -685 5 1319 588 289 45 17 chr15 96304489 96304734 -7190240 + L1MA4 LINE L1 5637 5925 -375 5 1319 1147 69 7 0 chr15 96305491 96305635 -7189339 + B1_Mus1 SINE Alu 1 145 -3 5 1319 323 0 48 0 chr15 96305635 96305677 -7189297 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 5 1319 1208 68 0 0 chr15 96305689 96305836 -7189138 + B1_Mus2 SINE Alu 1 147 0 5 1319 296 113 0 31 chr15 96305837 96305901 -7189073 + (CAAAAA)n Simple_repeat Simple_repeat 3 64 0 5 1319 2106 154 28 14 chr15 96306259 96306621 -7188353 + ORR1B2 LTR MaLR 1 367 0 5 1319 401 229 93 67 chr15 96306766 96306916 -7188058 - RMER15 LTR ERVL -75 500 347 5 1319 425 312 54 15 chr15 96307757 96307773 -7187201 + B4 SINE B4 70 90 -202 5 1319 723 240 0 15 chr15 96307773 96307904 -7187070 + B1_Mur2 SINE Alu 4 132 -17 5 1319 985 113 6 6 chr15 96307912 96308081 -7186893 + (TA)n Simple_repeat Simple_repeat 2 170 0 5 1319 1032 103 96 6 chr15 96308153 96308319 -7186655 + B2_Mm2 SINE B2 1 181 -14 5 1319 508 328 100 60 chr15 96308502 96308882 -7186092 + MLT1A1 LTR MaLR 1 395 -13 5 1319 739 184 148 56 chr15 96309218 96309414 -7185560 - B3 SINE B2 -1 215 2 5 1319 201 147 0 0 chr15 96309738 96309772 -7185202 + (GGGA)n Simple_repeat Simple_repeat 3 36 0 5 1319 237 132 0 0 chr15 96309844 96309882 -7185092 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 5 1319 646 250 39 22 chr15 96310710 96310890 -7184084 - Lx7 LINE L1 -1119 6354 6172 5 1319 828 191 0 0 chr15 96310890 96311068 -7183906 + (TG)n Simple_repeat Simple_repeat 2 179 0 5 1319 1028 124 6 0 chr15 96311087 96311265 -7183709 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 1319 200 256 0 0 chr15 96311296 96311335 -7183639 + C-rich Low_complexity Low_complexity 5 43 0 5 1319 671 241 51 0 chr15 96311336 96311473 -7183501 - B1_Mur2 SINE Alu -5 144 1 5 1319 231 320 65 65 chr15 96311477 96311584 -7183390 - LTR81B LTR ERV1? -237 1156 1050 5 1319 1212 114 0 0 chr15 96311528 96311694 -7183280 - B2_Mm2 SINE B2 -29 166 1 5 1319 2460 206 76 108 chr15 96311733 96312535 -7182439 + RMER17B LTR ERVK 1 776 -182 5 1319 1015 284 29 89 chr15 96312616 96312770 -7182204 - Lx7 LINE L1 -1388 6085 5942 5 1319 1949 142 199 3 chr15 96312770 96313122 -7181852 - MTC LTR MaLR 0 421 1 5 1319 1098 251 27 76 chr15 96313122 96313496 -7181478 - Lx7 LINE L1 -1532 5941 5589 5 1319 1359 285 55 47 chr15 96313511 96313626 -7181348 + Lx8 LINE L1 6358 6467 -1006 5 1319 2336 114 6 0 chr15 96313626 96313950 -7181024 + ORR1A3 LTR MaLR 1 326 0 5 1319 1359 285 55 47 chr15 96313950 96314346 -7180628 + Lx8 LINE L1 6468 6873 -600 5 1319 245 277 122 26 chr15 96314633 96314748 -7180226 + MIR SINE MIR 127 252 -10 5 1319 544 272 0 0 chr15 96314765 96314890 -7180084 - RSINE1 SINE B4 -38 127 3 5 1319 1282 41 129 0 chr15 96315046 96315216 -7179758 - B2_Mm1a SINE B2 -1 192 1 5 1319 722 224 0 7 chr15 96315232 96315367 -7179607 + ID_B1 SINE B4 87 220 -4 5 1319 420 71 0 0 chr15 96315439 96315495 -7179479 + (TCC)n Simple_repeat Simple_repeat 3 58 0 5 1319 207 0 0 0 chr15 96315811 96315834 -7179140 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1319 673 267 0 0 chr15 96316498 96316644 -7178330 - RSINE1 SINE B4 -17 148 3 5 1319 309 169 0 0 chr15 96317441 96317500 -7177474 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 1319 342 335 44 30 chr15 96318033 96318236 -7176738 + L1MEe LINE L1 719 924 -3930 5 1319 300 49 82 0 chr15 96318309 96318370 -7176604 + (CAAAA)n Simple_repeat Simple_repeat 2 67 0 5 1319 384 212 12 0 chr15 96318370 96318450 -7176524 + B4A SINE B4 2 82 -210 5 1319 322 154 46 99 chr15 96318770 96318884 -7176090 + B1_Mur4 SINE Alu 17 150 0 5 1319 554 288 20 20 chr15 96319033 96319182 -7175792 - RSINE1 SINE B4 -6 159 11 5 1319 260 0 57 0 chr15 96319268 96319303 -7175671 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 5 1319 643 259 46 20 chr15 96320039 96320236 -7174738 - B3 SINE B2 -14 202 1 5 1319 805 163 145 0 chr15 96320328 96320555 -7174419 - RMER17C LTR ERVK 0 410 151 5 1319 3875 54 27 0 chr15 96321042 96321520 -7173454 - L1_Mus1 LINE L1 0 6567 6077 5 1319 2175 156 83 28 chr15 96321700 96322123 -7172851 - RLTR41 LTR ERV1 0 446 1 5 1319 404 276 10 48 chr15 96322614 96322717 -7172257 + ID_B1 SINE B4 117 215 -9 5 1319 1520 58 0 25 chr15 96323328 96323524 -7171450 - B2_Mm1t SINE B2 -1 192 2 6 1319 27 0 0 0 chr15 96323609 96323636 -7171338 + AT_rich Low_complexity Low_complexity 1 27 0 6 1319 21 36 0 0 chr15 96323705 96323733 -7171241 + AT_rich Low_complexity Low_complexity 1 28 0 6 1319 235 0 28 28 chr15 96323733 96323769 -7171205 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 6 1319 656 246 0 0 chr15 96323769 96323907 -7171067 - B1F1 SINE Alu -11 138 1 6 1319 1541 145 91 58 chr15 96324184 96324579 -7170395 + RMER17C LTR ERVK 3 410 0 6 1319 310 262 165 53 chr15 96324743 96324876 -7170098 - RSINE1 SINE B4 -6 159 12 6 1319 180 0 0 0 chr15 96324879 96324899 -7170075 + (C)n Simple_repeat Simple_repeat 1 20 0 6 1319 434 298 26 0 chr15 96325603 96325717 -7169257 + RSINE1 SINE B4 1 117 -48 6 1319 4018 80 46 4 chr15 96325719 96326260 -7168714 - LTRIS2 LTR ERV1 0 564 1 6 1319 390 42 0 0 chr15 96326288 96326336 -7168638 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1319 499 267 35 0 chr15 96326522 96326638 -7168336 + ID_B1 SINE B4 92 211 -13 6 1319 346 287 76 15 chr15 96326638 96326653 -7168321 + B1F SINE Alu 11 149 0 6 1319 210 307 130 65 chr15 96326769 96326877 -7168097 - PB1D10 SINE Alu 0 117 3 6 1319 1247 205 67 70 chr15 96327134 96327187 -7167787 + ORR1D2 LTR MaLR 5 60 -310 6 1319 6096 124 31 24 chr15 96327187 96328163 -7166811 + RLTR13C1 LTR ERVK 1 983 0 6 1319 1247 205 67 70 chr15 96328163 96328232 -7166742 + ORR1D2 LTR MaLR 61 122 -248 6 1319 195 42 0 0 chr15 96328232 96328256 -7166718 + (AGGGGG)n Simple_repeat Simple_repeat 6 29 0 6 1319 1247 205 67 70 chr15 96328256 96328473 -7166501 + ORR1D2 LTR MaLR 123 343 -27 6 1319 265 372 16 32 chr15 96329055 96329180 -7165794 + MER21B LTR ERV1 345 467 -396 6 1319 285 344 93 6 chr15 96329666 96329827 -7165147 + MER21B LTR ERV1 487 661 -202 6 1319 4944 99 59 6 chr15 96329900 96330598 -7164376 + RMER19A LTR ERVK 1 735 -2 6 1319 653 327 96 21 chr15 96330663 96330944 -7164030 + RMER5 LTR ERV1 233 534 0 6 1319 24 0 0 0 chr15 96331103 96331127 -7163847 + AT_rich Low_complexity Low_complexity 1 24 0 6 1319 1027 276 121 17 chr15 96331498 96331904 -7163070 + RLTR20A2 LTR ERVK 115 562 -16 6 1319 793 162 36 7 chr15 96332196 96332333 -7162641 + B1_Mur1 SINE Alu 9 149 0 6 1319 621 207 0 0 chr15 96333034 96333339 -7161635 + (TG)n Simple_repeat Simple_repeat 1 305 0 6 1319 281 239 41 61 chr15 96333435 96333533 -7161441 + RLTR9E LTR ERVK 1 96 -272 6 1319 334 172 66 44 chr15 96333522 96333613 -7161361 - RLTR9A LTR ERVK -275 93 1 6 1319 291 191 116 108 chr15 96333717 96333846 -7161128 - RMER16-int LTR ERVK -27 5379 5250 6 1319 313 206 54 117 chr15 96333849 96333982 -7160992 + RLTR9E LTR ERVK 280 437 0 6 1319 217 273 57 57 chr15 96334059 96334129 -7160845 + B4A SINE B4 86 155 -137 6 1319 474 172 0 0 chr15 96334485 96334613 -7160361 + CT-rich Low_complexity Low_complexity 2 129 0 6 1319 387 303 57 78 chr15 96334613 96334806 -7160168 + ORR1E LTR MaLR 159 347 -12 6 1319 815 108 8 0 chr15 96334866 96334995 -7159979 + (TTC)n Simple_repeat Simple_repeat 2 131 0 6 1319 479 344 47 27 chr15 96335009 96335305 -7159669 - Lx8 LINE L1 -2 7471 7170 6 1319 3741 233 38 38 chr15 96335324 96336221 -7158753 - Lx8 LINE L1 -359 7114 6218 6 1319 301 164 0 0 chr15 96336221 96336276 -7158698 + RLTR15 LTR ERVK 1 55 -304 6 1319 225 119 0 0 chr15 96336276 96336318 -7158656 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 6 1319 854 125 7 0 chr15 96336988 96337132 -7157842 + (GA)n Simple_repeat Simple_repeat 1 145 0 6 1319 346 198 20 30 chr15 96337661 96337760 -7157214 - RLTR15 LTR ERVK -229 130 33 6 1320 234 0 0 0 chr15 96338288 96338314 -7156660 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 6 1320 7080 79 5 12 chr15 96338615 96339558 -7155416 - L1Md_F2 LINE L1 -3 6579 5643 6 1320 12756 84 23 4 chr15 96339555 96342046 -7152928 - L1Md_F LINE L1 -2979 2904 364 6 1320 329 0 0 24 chr15 96342088 96342130 -7152844 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1320 483 243 47 0 chr15 96342142 96342249 -7152725 - RSINE1 SINE B4 -51 114 3 6 1320 523 262 266 5 chr15 96342249 96342429 -7152545 - B4 SINE B4 -63 229 2 6 1320 1916 128 78 39 chr15 96342587 96342919 -7152055 + ORR1B2 LTR MaLR 15 359 -8 6 1320 474 210 1 0 chr15 96343529 96343623 -7151351 - MTE2a LTR MaLR -8 411 278 6 1320 309 320 86 43 chr15 96343665 96343685 -7151289 - MTE2a LTR MaLR -66 313 289 6 1320 1227 41 0 0 chr15 96343685 96343831 -7151143 - B1_Mus1 SINE Alu -2 146 1 6 1320 374 311 63 49 chr15 96343831 96343973 -7151001 - MTE2a LTR MaLR -92 287 144 6 1320 444 314 27 23 chr15 96344000 96344180 -7150794 - MTE2a LTR MaLR -237 182 1 6 1320 28 71 0 0 chr15 96344684 96344740 -7150234 + AT_rich Low_complexity Low_complexity 1 56 0 6 1320 206 118 0 0 chr15 96344807 96344841 -7150133 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 6 1320 1163 44 0 0 chr15 96344851 96344987 -7149987 + B1_Mus2 SINE Alu 2 137 -10 6 1320 2932 115 27 13 chr15 96345017 96345465 -7149509 - RMER19B LTR ERVK 0 902 449 6 1320 970 79 0 0 chr15 96345465 96345591 -7149383 + B1_Mus1 SINE Alu 3 128 -20 6 1320 2437 192 39 51 chr15 96345576 96346150 -7148824 - RMER19B LTR ERVK -452 450 1 6 1320 369 0 0 0 chr15 96346153 96346194 -7148780 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1320 384 119 0 0 chr15 96346683 96346742 -7148232 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1320 390 42 0 0 chr15 96346995 96347043 -7147931 + (TC)n Simple_repeat Simple_repeat 1 48 0 6 1320 311 335 113 47 chr15 96347221 96347434 -7147540 + MIRb SINE MIR 40 266 -2 6 1320 826 258 26 96 chr15 96347475 96348059 -7146915 + RLTR11B LTR ERVK 1 453 0 6 1320 504 276 32 19 chr15 96348175 96348330 -7146644 + L1MD2 LINE L1 5567 5723 -519 6 1320 441 274 127 47 chr15 96348834 96349087 -7145887 + L1MD2 LINE L1 5827 6099 -260 6 1320 669 131 321 12 chr15 96349540 96349702 -7145272 + B3 SINE B2 2 213 -3 6 1320 283 296 18 36 chr15 96350036 96350148 -7144826 + PB1 SINE Alu 1 110 -17 6 1320 347 301 16 66 chr15 96350305 96350426 -7144548 - MER2 DNA MER2_type -5 340 226 6 1320 497 160 156 25 chr15 96350425 96350547 -7144427 - B2_Mm2 SINE B2 -11 184 47 6 1320 1194 66 72 6 chr15 96350594 96350761 -7144213 - B2_Mm1t SINE B2 -14 179 2 6 1320 671 240 16 0 chr15 96351911 96352036 -7142938 + B1_Mur1 SINE Alu 12 138 -11 6 1320 797 57 32 0 chr15 96352036 96352160 -7142814 + (CA)n Simple_repeat Simple_repeat 2 129 0 6 1320 594 268 96 12 chr15 96352330 96352496 -7142478 + B3A SINE B2 1 180 -18 6 1320 1407 96 38 42 chr15 96353094 96353318 -7141656 + Lx3A LINE L1 6736 6966 -15 6 1320 405 0 0 0 chr15 96353318 96353363 -7141611 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 6 1320 1407 96 38 42 chr15 96353363 96353378 -7141596 + Lx3A LINE L1 6967 6974 -7 6 1320 262 273 105 85 chr15 96353473 96353747 -7141227 + L2a LINE L2 3133 3423 -3 6 1320 453 260 37 37 chr15 96354049 96354185 -7140789 + B1_Mur3 SINE Alu 3 138 -11 6 1320 288 0 0 0 chr15 96354510 96354542 -7140432 + (TTA)n Simple_repeat Simple_repeat 2 33 0 6 1320 504 158 0 0 chr15 96354543 96354638 -7140336 + GA-rich Low_complexity Low_complexity 1 95 0 6 1320 469 249 64 46 chr15 96354851 96355024 -7139950 - LTR80B LTR ERVL -390 194 19 6 1320 196 323 30 40 chr15 96355038 96355138 -7139836 - MIRb SINE MIR -168 100 2 6 1320 1024 108 7 0 chr15 96355198 96355346 -7139628 - B1_Mur4 SINE Alu -1 149 1 6 1320 282 73 0 0 chr15 96355767 96355808 -7139166 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 6 1320 334 305 74 39 chr15 96355898 96356127 -7138847 + RLTR15 LTR ERVK 105 341 -18 6 1320 360 111 0 0 chr15 96357309 96357363 -7137611 + (GGA)n Simple_repeat Simple_repeat 2 55 0 6 1320 334 209 105 79 chr15 96359102 96359216 -7135758 - MTEa LTR MaLR -4 375 259 6 1320 582 276 58 81 chr15 96359207 96359515 -7135459 - MTEa LTR MaLR -75 304 4 6 1320 895 155 0 53 chr15 96359521 96359580 -7135394 + B1_Mur1 SINE Alu 5 63 -86 6 1320 1580 132 36 63 chr15 96359580 96359911 -7135063 + RLTRETN_Mm LTR ERVK 1 322 0 6 1320 895 155 0 53 chr15 96359911 96360001 -7134973 + B1_Mur1 SINE Alu 64 146 -3 6 1320 234 0 0 0 chr15 96360390 96360416 -7134558 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 6 1320 1078 53 0 15 chr15 96360417 96360551 -7134423 - B1_Mus2 SINE Alu -12 135 4 6 1320 422 288 104 22 chr15 96360987 96361122 -7133852 + RSINE1 SINE B4 7 152 -13 6 1320 2509 212 89 6 chr15 96361201 96361728 -7133246 - Lx5 LINE L1 0 7050 6480 6 1320 613 197 8 38 chr15 96362053 96362185 -7132789 - B1_Mur1 SINE Alu -21 128 1 6 1320 688 276 40 142 chr15 96362569 96362757 -7132217 - MTEa LTR MaLR -17 362 192 6 1320 1345 246 194 54 chr15 96362757 96363293 -7131681 + RMER19C LTR ERVK 1 611 0 6 1320 688 276 40 142 chr15 96363293 96363378 -7131596 - MTEa LTR MaLR -188 191 115 6 1320 396 0 0 0 chr15 96363378 96363422 -7131552 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1320 688 276 40 142 chr15 96363422 96363548 -7131426 - MTEa LTR MaLR -265 114 3 6 1320 300 25 0 24 chr15 96364503 96364544 -7130430 + B2_Mm2 SINE B2 130 169 -26 6 1320 1342 57 34 11 chr15 96364549 96364726 -7130248 + B2_Mm2 SINE B2 1 181 -14 6 1320 323 107 335 77 chr15 96364768 96364878 -7130096 + B2_Mm2 SINE B2 46 187 -8 6 1320 584 222 89 0 chr15 96365818 96365953 -7129021 + B1_Mur1 SINE Alu 3 149 0 6 1320 368 261 44 18 chr15 96366231 96366344 -7128630 - PB1D10 SINE Alu -1 116 1 6 1320 369 0 0 0 chr15 96366427 96366468 -7128506 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1320 271 144 11 78 chr15 96366518 96366608 -7128366 + (TTATA)n Simple_repeat Simple_repeat 1 84 0 6 1320 307 264 0 27 chr15 96367085 96367159 -7127815 - L1MEg LINE L1 -4132 1952 1881 6 1320 1126 95 0 0 chr15 96367375 96367522 -7127452 - B1_Mm SINE Alu 0 147 1 6 1320 278 309 62 41 chr15 96367732 96367877 -7127097 + L2c LINE L2 3222 3369 -18 6 1320 1248 64 0 0 chr15 96368368 96368525 -7126449 + B2_Mm2 SINE B2 2 158 -37 6 1320 387 0 0 0 chr15 96368526 96368569 -7126405 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 6 1320 1127 197 48 106 chr15 96368601 96369099 -7125875 + RMER10A LTR ERVL 2 401 -41 6 1320 773 118 16 0 chr15 96369131 96369258 -7125716 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 6 1320 477 34 0 0 chr15 96369269 96369328 -7125646 + (CA)n Simple_repeat Simple_repeat 1 59 0 7 1320 4270 63 21 7 chr15 96370519 96371458 -7123516 - L1VL2 LINE L1 -2198 1417 459 7 1320 3201 27 0 0 chr15 96371488 96371855 -7123119 - L1Md_T LINE L1 -2 6580 6214 7 1320 423 0 0 0 chr15 96372881 96372928 -7122046 + (CAATA)n Simple_repeat Simple_repeat 2 48 0 7 1320 22 0 0 0 chr15 96373363 96373385 -7121589 + AT_rich Low_complexity Low_complexity 1 22 0 7 1320 216 0 0 0 chr15 96373972 96373996 -7120978 + (A)n Simple_repeat Simple_repeat 1 24 0 7 1320 193 29 59 0 chr15 96374432 96374466 -7120508 + (TTTTTG)n Simple_repeat Simple_repeat 4 39 0 7 1320 25 51 0 0 chr15 96374491 96374530 -7120444 + AT_rich Low_complexity Low_complexity 1 39 0 7 1320 546 228 26 52 chr15 96374545 96374739 -7120235 + Lx7 LINE L1 7507 7695 -1 7 1320 1162 57 0 14 chr15 96375236 96375379 -7119595 + B1_Mus1 SINE Alu 1 141 -7 7 1320 213 39 0 0 chr15 96375382 96375408 -7119566 + (TAA)n Simple_repeat Simple_repeat 2 27 0 7 1320 234 0 0 0 chr15 96375602 96375628 -7119346 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7 1320 501 263 58 75 chr15 96375962 96376188 -7118786 - RMER15 LTR ERVL -2 573 352 7 1320 757 139 14 28 chr15 96376565 96376706 -7118268 - B1_Mus2 SINE Alu 0 147 9 7 1320 566 301 47 51 chr15 96376835 96377111 -7117863 - L1MB5 LINE L1 -117 6057 5783 7 1320 330 324 183 4 chr15 96377094 96377367 -7117607 - L1M5 LINE L1 -419 5760 5439 7 1320 1276 34 0 0 chr15 96377415 96377562 -7117412 - B1_Mm SINE Alu 0 147 1 7 1320 369 0 0 0 chr15 96377669 96377710 -7117264 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1320 203 0 37 0 chr15 96377979 96378006 -7116968 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 7 1320 238 355 40 64 chr15 96378803 96379005 -7115969 - MIRb SINE MIR 0 268 72 7 1320 1136 49 35 0 chr15 96379673 96379815 -7115159 + B1_Mm SINE Alu 1 147 0 7 1320 217 274 0 16 chr15 96380219 96380282 -7114692 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 7 1320 1970 161 29 0 chr15 96380563 96380912 -7114062 - RLTR15 LTR ERVK 0 359 1 7 1320 459 170 2 159 chr15 96381063 96381199 -7113775 + PB1 SINE Alu 8 140 -9 7 1320 252 276 65 13 chr15 96381219 96381296 -7113678 + ID4 SINE ID 3 83 0 7 1320 629 39 427 0 chr15 96381334 96381437 -7113537 + B1_Mm SINE Alu 1 147 0 7 1320 249 182 0 0 chr15 96381443 96381498 -7113476 + G-rich Low_complexity Low_complexity 1 55 0 7 1320 369 308 31 3 chr15 96381500 96381613 -7113361 + B1F SINE Alu 2 115 -2 7 1320 3275 148 161 29 chr15 96381636 96382387 -7112587 - RMER17B LTR ERVK -107 851 2 7 1320 359 281 6 0 chr15 96383086 96383257 -7111717 + (TG)n Simple_repeat Simple_repeat 1 172 0 7 1320 433 327 32 13 chr15 96383262 96383420 -7111554 - RSINE1 SINE B4 -1 164 4 7 1320 4536 12 0 0 chr15 96383455 96383948 -7111026 - MT2_Mm LTR ERVL 0 493 1 7 1320 319 0 0 0 chr15 96383948 96383986 -7110988 - MERVL-int LTR ERVL 0 5485 5448 7 1320 384 179 46 35 chr15 96383986 96384073 -7110901 - ORR1A3-int LTR MaLR -1323 640 553 7 1320 47768 13 10 0 chr15 96384073 96389399 -7105575 - MERVL-int LTR ERVL -125 5360 1 7 1320 4536 12 0 0 chr15 96389399 96389892 -7105082 - MT2_Mm LTR ERVL 0 493 1 7 1320 439 78 56 0 chr15 96390819 96390909 -7104065 + (TG)n Simple_repeat Simple_repeat 2 96 0 7 1320 336 270 36 112 chr15 96391446 96391642 -7103332 - L2a LINE L2 -268 3158 2978 7 1320 3361 41 0 145 chr15 96391968 96392478 -7102496 - RLTR10C LTR ERVK 0 436 1 7 1320 344 22 22 0 chr15 96392651 96392696 -7102278 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1320 999 235 93 39 chr15 96392948 96393282 -7101692 - MTB_Mm LTR MaLR -59 362 2 7 1320 2948 122 9 114 chr15 96394363 96394607 -7100367 + RLTR28 LTR ERVL 1 211 -313 7 1320 1160 107 17 22 chr15 96394607 96394788 -7100186 + B2_Mm2 SINE B2 2 181 -14 7 1320 1132 82 7 0 chr15 96394791 96394937 -7100037 - B1_Mm SINE Alu 0 147 1 7 1320 2948 122 9 114 chr15 96394937 96395269 -7099705 + RLTR28 LTR ERVL 212 520 -4 7 1320 2656 62 6 0 chr15 96395454 96395779 -7099195 - ORR1A2 LTR MaLR 0 327 1 7 1320 180 200 127 114 chr15 96395804 96395883 -7099091 - L2 LINE L2 -2790 629 550 7 1320 2475 118 25 18 chr15 96396278 96396674 -7098300 + MTB_Mm LTR MaLR 1 399 -8 7 1320 744 167 91 0 chr15 96397729 96397861 -7097113 + RMER10B LTR ERVL 1 144 -254 7 1320 1189 56 7 0 chr15 96398073 96398217 -7096757 + B1_Mus1 SINE Alu 4 148 0 7 1320 204 40 0 0 chr15 96399106 96399131 -7095843 + (A)n Simple_repeat Simple_repeat 1 25 0 7 1320 395 285 84 19 chr15 96399448 96399602 -7095372 + LTR37A LTR ERV1 77 240 -186 7 1320 873 167 28 0 chr15 96399844 96399988 -7094986 + B1F SINE Alu 1 148 -1 7 1320 261 0 0 0 chr15 96400044 96400073 -7094901 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 1320 405 0 0 0 chr15 96400561 96400606 -7094368 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1320 708 168 92 0 chr15 96400769 96400900 -7094074 + B1_Mur2 SINE Alu 5 147 -2 7 1320 340 270 40 10 chr15 96401410 96401511 -7093463 - PB1D10 SINE Alu -13 104 1 7 1320 1507 63 11 0 chr15 96401585 96401776 -7093198 - B2_Mm2 SINE B2 -1 194 2 7 1320 280 275 156 42 chr15 96403719 96403886 -7091088 - MER5A DNA MER1_type -1 188 3 7 1320 27 0 0 0 chr15 96406439 96406466 -7088508 + AT_rich Low_complexity Low_complexity 1 27 0 7 1320 723 203 6 63 chr15 96407580 96407738 -7087236 + B1_Mur1 SINE Alu 1 149 0 7 1320 2789 93 27 12 chr15 96409954 96410355 -7084619 + MTB_Mm LTR MaLR 1 407 0 7 1320 1094 212 127 46 chr15 96411070 96411377 -7083597 - IAPEY3_LTR LTR ERVK 0 332 1 7 1320 1467 189 55 15 chr15 96411377 96411720 -7083254 - IAPEz-int LTR ERVK 0 6481 6125 7 1320 1602 120 95 32 chr15 96411737 96412054 -7082920 - IAPEY3-int LTR ERVK -342 7338 6965 7 1320 1435 124 107 0 chr15 96412054 96412279 -7082695 - IAPEz-int LTR ERVK -1287 5255 5007 7 1320 386 140 0 0 chr15 96412279 96412336 -7082638 - IAPEz-int LTR ERVK -6039 503 447 7 1320 297 260 49 20 chr15 96412353 96412455 -7082519 - RMER16-int LTR ERVK -6015 1566 1462 7 1320 759 202 129 0 chr15 96412598 96412761 -7082213 - RMER16-int LTR ERVK -4903 503 320 7 1320 844 110 8 0 chr15 96412774 96412901 -7082073 - MMERVK10C-int LTR ERVK -6746 835 708 7 1320 1212 159 0 10 chr15 96413000 96413203 -7081771 - MMERVK10C-int LTR ERVK -7155 426 226 7 1320 239 278 0 36 chr15 96413203 96413259 -7081715 - RLTR27 LTR ERVK -35 274 221 7 1320 900 158 28 39 chr15 96413259 96413437 -7081537 - MMERVK10C-int LTR ERVK -6288 193 18 7 1320 354 58 19 0 chr15 96413437 96413489 -7081485 - MMERVK10C-int LTR ERVK -1932 55 3 7 1320 1099 195 119 52 chr15 96413500 96413798 -7081176 - IAPEY3_LTR LTR ERVK -6 305 1 7 1320 293 0 0 26 chr15 96415718 96415756 -7079218 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1320 577 169 16 48 chr15 96416446 96416570 -7078404 + PB1D9 SINE Alu 1 120 0 7 1320 22 0 0 0 chr15 96416579 96416601 -7078373 + AT_rich Low_complexity Low_complexity 1 22 0 7 1320 207 0 0 0 chr15 96416707 96416730 -7078244 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 7 1320 184 182 0 0 chr15 96416886 96416919 -7078055 - MIRb SINE MIR -199 69 37 7 1320 1425 133 0 46 chr15 96417991 96418228 -7076746 - URR1A DNA MER1_type 0 226 1 7 1320 21 36 0 0 chr15 96418724 96418752 -7076222 + AT_rich Low_complexity Low_complexity 1 28 0 7 1320 359 308 0 0 chr15 96418953 96419031 -7075943 + ID4 SINE ID 6 83 0 7 1320 899 86 132 0 chr15 96420271 96420422 -7074552 - URR1A DNA MER1_type -4 222 52 7 1320 899 291 158 15 chr15 96421337 96421742 -7073232 + Lx8 LINE L1 6833 7295 -178 7 1320 1226 76 0 0 chr15 96421776 96421933 -7073041 + B2_Mm2 SINE B2 1 157 -38 7 1320 197 33 0 32 chr15 96421938 96421969 -7073005 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 7 1320 503 137 84 112 chr15 96423092 96423306 -7071668 + RMER17C LTR ERVK 68 275 -135 7 1320 240 228 0 0 chr15 96424619 96424676 -7070298 + (CATA)n Simple_repeat Simple_repeat 3 59 0 7 1320 329 289 26 0 chr15 96425284 96425360 -7069614 - PB1D7 SINE Alu -41 79 2 7 1320 785 225 22 16 chr15 96425412 96425597 -7069377 + B3 SINE B2 19 204 -12 7 1320 541 250 36 7 chr15 96426197 96426334 -7068640 + ID_B1 SINE B4 82 222 -2 7 1320 330 26 0 0 chr15 96426525 96426564 -7068410 + (TTCC)n Simple_repeat Simple_repeat 3 41 0 7 1320 186 43 0 0 chr15 96426570 96426593 -7068381 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 7 1320 1251 50 6 0 chr15 96426593 96426752 -7068222 - B2_Mm1t SINE B2 -33 160 1 7 1320 210 353 48 29 chr15 96426968 96427073 -7067901 - L3 LINE CR1 -518 3971 3865 7 1320 279 0 0 0 chr15 96427082 96427113 -7067861 + (T)n Simple_repeat Simple_repeat 1 31 0 7 1320 510 288 71 53 chr15 96427990 96428272 -7066702 + B4A SINE B4 1 287 -5 7 1320 21 0 0 0 chr15 96428980 96429001 -7065973 + AT_rich Low_complexity Low_complexity 1 21 0 7 1320 206 293 39 39 chr15 96429102 96429180 -7065794 - MIRb SINE MIR -137 131 54 7 1320 355 280 119 18 chr15 96429920 96430029 -7064945 + MIRb SINE MIR 86 205 -63 7 1320 225 0 0 0 chr15 96430065 96430090 -7064884 + (TA)n Simple_repeat Simple_repeat 2 26 0 7 1320 1410 91 0 5 chr15 96431258 96431446 -7063528 + B2_Mm2 SINE B2 2 188 -7 7 1320 752 265 87 32 chr15 96431550 96431827 -7063147 + B4 SINE B4 1 292 0 7 1320 572 235 159 18 chr15 96432341 96432643 -7062331 + ORR1D2 LTR MaLR 2 359 0 7 1320 248 333 42 25 chr15 96433699 96433819 -7061155 + B4 SINE B4 2 123 -169 7 1320 738 134 84 0 chr15 96433834 96433953 -7061021 - B1_Mus2 SINE Alu -18 129 1 7 1320 25 65 0 0 chr15 96434132 96434178 -7060796 + AT_rich Low_complexity Low_complexity 1 46 0 7 1320 487 218 0 65 chr15 96434228 96434336 -7060638 - PB1D10 SINE Alu -6 111 11 7 1320 424 287 18 48 chr15 96434395 96434560 -7060414 - RSINE1 SINE B4 -3 162 3 7 1320 258 32 0 0 chr15 96435378 96435409 -7059565 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 1320 227 283 106 21 chr15 96435462 96435603 -7059371 + HAL1 LINE L1 229 381 -2126 7 1320 355 293 42 76 chr15 96435653 96435711 -7059263 + MT2B2 LTR ERVL 106 158 -426 8 1320 479 233 33 0 chr15 96435711 96435801 -7059173 + B1F1 SINE Alu 1 93 -56 8 1320 414 133 0 0 chr15 96435816 96435906 -7059068 + (TCTA)n Simple_repeat Simple_repeat 1 90 0 8 1320 321 361 55 23 chr15 96436268 96436486 -7058488 + L1MC5 LINE L1 7337 7561 -400 8 1320 272 277 11 57 chr15 96436508 96436596 -7058378 + B1_Mm SINE Alu 8 91 -56 8 1320 691 161 9 19 chr15 96436973 96437289 -7057685 + (CA)n Simple_repeat Simple_repeat 1 312 0 8 1320 528 327 102 66 chr15 96437308 96437367 -7057607 + HAL1 LINE L1 1288 1347 -1160 7 1320 664 217 65 0 chr15 96437367 96437505 -7057469 + B1_Mur2 SINE Alu 3 149 0 8 1320 528 327 102 66 chr15 96437505 96437808 -7057166 + HAL1 LINE L1 1348 1663 -844 7 1320 225 0 0 0 chr15 96438083 96438108 -7056866 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 8 1320 426 254 57 16 chr15 96438110 96438234 -7056740 + RSINE1 SINE B4 1 129 -36 8 1320 35 88 0 0 chr15 96438247 96438338 -7056636 + AT_rich Low_complexity Low_complexity 1 91 0 8 1320 897 116 19 64 chr15 96438353 96438510 -7056464 + B1_Mur4 SINE Alu 1 150 0 8 1320 196 417 25 25 chr15 96438599 96438759 -7056215 - MIR3 SINE MIR -7 201 42 8 1320 342 98 0 0 chr15 96438940 96438991 -7055983 + (CGTG)n Simple_repeat Simple_repeat 1 51 0 8 1320 779 132 4 52 chr15 96439760 96440018 -7054956 + GA-rich Low_complexity Low_complexity 1 245 0 8 1320 228 86 0 0 chr15 96440642 96440677 -7054297 + (TC)n Simple_repeat Simple_repeat 2 36 0 8 1320 180 0 0 0 chr15 96440677 96440697 -7054277 + (CA)n Simple_repeat Simple_repeat 2 21 0 8 1320 562 240 112 17 chr15 96440705 96440883 -7054091 - Lx5 LINE L1 -11 7039 6845 8 1320 3557 187 71 1 chr15 96440910 96441585 -7053389 + RMER1B Other Other 345 1066 0 8 1320 10762 184 71 52 chr15 96441586 96443526 -7051448 - Lx5 LINE L1 -164 6886 4947 8 1320 216 0 0 0 chr15 96443526 96443550 -7051424 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 1320 18822 162 60 13 chr15 96443550 96444926 -7050048 - Lx5 LINE L1 -931 4946 3481 8 1320 261 0 0 0 chr15 96444926 96444955 -7050019 + (TTG)n Simple_repeat Simple_repeat 2 30 0 8 1320 18822 162 60 13 chr15 96444955 96446289 -7048685 - Lx5 LINE L1 -2397 3480 2070 8 1320 342 0 0 0 chr15 96446794 96446832 -7048142 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 1320 257 264 221 35 chr15 96447337 96447482 -7047492 + MIRc SINE MIR 31 202 -66 8 1320 398 264 45 53 chr15 96447691 96447823 -7047151 + B4 SINE B4 74 204 -88 8 1320 857 72 2 0 chr15 96447717 96447833 -7047141 + B1_Mus2 SINE Alu 9 126 -24 8 1320 402 21 0 0 chr15 96447833 96447880 -7047094 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1320 828 98 68 0 chr15 96447880 96447895 -7047079 + B1_Mur4 SINE Alu 127 147 -3 8 1320 404 228 0 42 chr15 96447957 96448053 -7046921 - RSINE1 SINE B4 -71 94 3 8 1320 2203 166 11 78 chr15 96448099 96448180 -7046794 + MTC LTR MaLR 1 81 -340 8 1320 1214 81 10 36 chr15 96448180 96448372 -7046602 + L1_Mus3 LINE L1 6451 6637 -1 8 1320 2203 166 11 78 chr15 96448372 96448741 -7046233 + MTC LTR MaLR 82 421 0 8 1320 716 171 8 0 chr15 96448996 96449119 -7045855 + URR1B DNA MER1_type 102 225 0 8 1320 484 215 125 0 chr15 96449889 96450025 -7044949 + B1F SINE Alu 7 149 0 8 1320 189 94 0 0 chr15 96450044 96450076 -7044898 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 8 1320 21 71 0 0 chr15 96450107 96450149 -7044825 + AT_rich Low_complexity Low_complexity 1 42 0 8 1320 377 265 29 29 chr15 96451229 96451365 -7043609 + MER5A1 DNA MER1_type 26 161 -5 8 1320 264 284 81 0 chr15 96451904 96451978 -7042996 + ID4_ SINE ID 2 81 -2 8 1320 371 114 36 45 chr15 96452066 96452176 -7042798 + GA-rich Low_complexity Low_complexity 1 109 0 8 1320 234 0 0 0 chr15 96452182 96452208 -7042766 + (CAGA)n Simple_repeat Simple_repeat 1 26 0 8 1320 546 211 51 34 chr15 96452718 96452836 -7042138 + B1F2 SINE Alu 24 143 -6 8 1320 293 0 27 0 chr15 96452839 96452876 -7042098 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 8 1320 629 248 18 59 chr15 96452884 96453092 -7041882 + B3A SINE B2 12 216 0 8 1320 547 250 48 0 chr15 96453402 96453526 -7041448 + RSINE1 SINE B4 1 130 -35 8 1320 339 25 0 0 chr15 96453574 96453614 -7041360 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 1320 207 0 0 0 chr15 96453680 96453703 -7041271 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 1320 22 0 0 0 chr15 96453920 96453942 -7041032 + AT_rich Low_complexity Low_complexity 1 22 0 8 1320 1125 135 15 25 chr15 96454842 96455039 -7039935 + B2_Mm2 SINE B2 1 195 0 8 1320 415 278 90 8 chr15 96455134 96455268 -7039706 + RSINE1 SINE B4 3 147 -18 8 1320 390 21 0 0 chr15 96455303 96455350 -7039624 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 8 1320 234 0 0 0 chr15 96455410 96455436 -7039538 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 8 1320 1296 44 0 12 chr15 96455436 96455597 -7039377 - B2_Mm2 SINE B2 -34 161 3 8 1320 1125 143 0 176 chr15 96456271 96456543 -7038431 - URR1A DNA MER1_type -2 224 1 8 1320 251 233 305 55 chr15 96456552 96456653 -7038321 + Lx9 LINE L1 7316 7411 -233 8 1320 348 24 0 0 chr15 96456653 96456694 -7038280 + (CATA)n Simple_repeat Simple_repeat 1 41 0 8 1320 251 233 305 55 chr15 96456694 96456792 -7038182 + Lx9 LINE L1 7412 7564 -80 8 1320 257 218 13 0 chr15 96457666 96457744 -7037230 + (TG)n Simple_repeat Simple_repeat 2 80 0 8 1320 2997 76 5 2 chr15 96458019 96458428 -7036546 + L1_Mus3 LINE L1 6229 6638 0 8 1320 1391 84 16 10 chr15 96458487 96458679 -7036295 + B2_Mm1t SINE B2 1 193 0 8 1320 927 251 56 19 chr15 96459037 96459252 -7035722 + B4A SINE B4 56 278 -14 8 1320 284 243 80 13 chr15 96459670 96459745 -7035229 - ID_B1 SINE B4 -63 161 82 8 1320 861 86 0 0 chr15 96459748 96459865 -7035109 + B1_Mus2 SINE Alu 28 144 -3 8 1320 639 0 0 0 chr15 96459878 96459949 -7035025 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 8 1320 210 37 0 0 chr15 96460165 96460192 -7034782 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 8 1320 569 264 38 75 chr15 96460375 96460588 -7034386 + B4A SINE B4 16 220 -72 8 1320 557 178 19 9 chr15 96460624 96460732 -7034242 + RSINE1 SINE B4 23 131 -34 8 1320 263 71 24 0 chr15 96460735 96460777 -7034197 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 1320 571 128 106 0 chr15 96461452 96461546 -7033428 - B3 SINE B2 -112 104 1 8 1320 222 118 0 0 chr15 96461567 96461601 -7033373 + (TAA)n Simple_repeat Simple_repeat 1 34 0 8 1320 905 257 134 12 chr15 96461673 96462008 -7032966 + L1M2 LINE L1 5353 5728 -584 8 1320 566 187 7 0 chr15 96462072 96462222 -7032752 + (CA)n Simple_repeat Simple_repeat 2 152 0 8 1320 240 319 132 9 chr15 96462594 96462612 -7032362 + B4 SINE B4 71 102 -190 8 1320 432 248 139 0 chr15 96462612 96462741 -7032233 + B1F1 SINE Alu 3 149 0 8 1320 248 235 260 20 chr15 96462759 96462859 -7032115 + B3 SINE B2 47 170 -46 8 1320 198 0 0 0 chr15 96462879 96462901 -7032073 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 8 1320 494 279 57 0 chr15 96462917 96463039 -7031935 + RSINE1 SINE B4 16 144 -21 8 1320 297 0 0 0 chr15 96463059 96463092 -7031882 + (CA)n Simple_repeat Simple_repeat 1 33 0 8 1320 189 0 0 0 chr15 96463222 96463243 -7031731 + (GA)n Simple_repeat Simple_repeat 2 22 0 8 1320 198 273 115 13 chr15 96463463 96463541 -7031433 + MIRb SINE MIR 65 150 -118 8 1320 1068 194 78 153 chr15 96463560 96463660 -7031314 - MTD LTR MaLR 0 419 364 8 1320 2719 148 13 19 chr15 96463660 96464122 -7030852 - RMER6B LTR ERVK -2 459 1 8 1320 1068 194 78 153 chr15 96464122 96464355 -7030619 - MTD LTR MaLR -56 363 111 8 1320 1868 108 17 103 chr15 96464364 96464713 -7030261 + ORR1A4 LTR MaLR 2 320 -9 8 1320 739 218 7 27 chr15 96464713 96464859 -7030115 + B1_Mur3 SINE Alu 1 143 -6 8 1320 225 289 0 0 chr15 96464905 96464957 -7030017 - MTD LTR MaLR -300 119 68 8 1320 189 0 0 0 chr15 96464957 96464978 -7029996 + (T)n Simple_repeat Simple_repeat 1 21 0 8 1320 1065 103 7 0 chr15 96464978 96465124 -7029850 - B1_Mus1 SINE Alu 0 148 2 8 1320 1022 102 32 6 chr15 96466091 96466249 -7028725 - B2_Mm2 SINE B2 0 195 34 8 1320 416 262 146 11 chr15 96466763 96466948 -7028026 + MER20 DNA MER1_type 8 217 -2 8 1320 1092 70 20 14 chr15 96466985 96467131 -7027843 + B1_Mus2 SINE Alu 1 147 0 8 1320 568 200 71 36 chr15 96468333 96468473 -7026501 - B1_Mur2 SINE Alu 0 149 5 8 1321 309 100 0 0 chr15 96469063 96469113 -7025861 + (T)n Simple_repeat Simple_repeat 1 50 0 8 1321 242 281 36 24 chr15 96469135 96469219 -7025755 + MER5B DNA MER1_type 93 177 -1 8 1321 243 0 0 0 chr15 96469220 96469247 -7025727 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 8 1321 306 328 65 14 chr15 96469617 96469756 -7025218 - MIRb SINE MIR -110 158 13 8 1321 189 0 0 0 chr15 96470554 96470575 -7024399 + (A)n Simple_repeat Simple_repeat 1 21 0 8 1321 181 275 86 12 chr15 96471987 96472068 -7022906 + L2 LINE L2 502 588 -2831 8 1321 732 52 0 0 chr15 96472770 96472867 -7022107 + (TCC)n Simple_repeat Simple_repeat 1 97 0 8 1321 246 32 0 0 chr15 96474715 96474746 -7020228 + (CCCCCG)n Simple_repeat Simple_repeat 4 34 0 8 1321 1320 129 8 37 chr15 96474746 96474988 -7019986 + Lx3A LINE L1 6732 6966 -15 8 1321 210 71 0 0 chr15 96474988 96475016 -7019958 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 8 1321 3058 204 12 129 chr15 96476126 96476737 -7018237 + Lx7 LINE L1 4587 5169 -711 8 1321 1058 44 79 22 chr15 96476737 96476876 -7018098 + B1_Mm SINE Alu 1 147 0 8 1321 3058 204 12 129 chr15 96476876 96477189 -7017785 + Lx7 LINE L1 5170 5403 -477 8 1321 864 251 159 24 chr15 96477203 96477586 -7017388 + Lx7 LINE L1 5702 6136 -1560 8 1321 412 66 88 0 chr15 96477670 96477761 -7017213 + T-rich Low_complexity Low_complexity 3 101 0 8 1321 24 0 0 0 chr15 96477873 96477897 -7017077 + GC_rich Low_complexity Low_complexity 1 24 0 8 1321 997 87 29 14 chr15 96478721 96478732 -7016242 - B1_Mus1 SINE Alu -2 146 137 8 1321 189 0 0 0 chr15 96478732 96478753 -7016221 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 9 1321 997 87 29 14 chr15 96478753 96478881 -7016093 - B1_Mus1 SINE Alu -12 136 5 8 1321 318 267 0 0 chr15 96478910 96478985 -7015989 + MIRb SINE MIR 92 166 -102 9 1321 383 247 22 22 chr15 96478987 96479078 -7015896 - MTEb LTR MaLR -2 377 287 9 1321 277 292 14 91 chr15 96479087 96479230 -7015744 - RMER12 LTR ERVK -464 858 727 9 1321 205 374 0 0 chr15 96479838 96480001 -7014973 + (CAGA)n Simple_repeat Simple_repeat 4 166 0 9 1321 186 43 0 0 chr15 96480427 96480450 -7014524 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 1321 197 296 224 0 chr15 96480968 96481093 -7013881 + L2 LINE L2 2437 2589 -830 9 1321 276 310 153 57 chr15 96481539 96481997 -7012977 - Charlie7 DNA MER1_type -21 2591 2090 9 1321 511 168 17 126 chr15 96482920 96483044 -7011930 + B1_Mur3 SINE Alu 1 120 0 9 1321 630 249 56 28 chr15 96483605 96483783 -7011191 - B3A SINE B2 -15 183 1 9 1321 239 211 39 0 chr15 96483867 96483919 -7011055 + GA-rich Low_complexity Low_complexity 3 56 0 9 1321 285 299 39 0 chr15 96484277 96484354 -7010620 + PB1D10 SINE Alu 30 109 -8 9 1321 29 28 0 0 chr15 96484900 96484936 -7010038 + AT_rich Low_complexity Low_complexity 1 36 0 9 1321 443 232 5 2 chr15 96485122 96485224 -7009750 - PB1D10 SINE Alu -7 113 10 9 1321 941 261 58 76 chr15 96485224 96485558 -7009416 + ORR1E LTR MaLR 1 351 -28 9 1321 814 211 116 40 chr15 96485659 96485857 -7009117 - B3 SINE B2 -3 213 1 9 1321 880 255 67 31 chr15 96485950 96486205 -7008769 + ORR1D2 LTR MaLR 1 264 -106 9 1321 491 245 47 65 chr15 96486259 96486429 -7008545 + ORR1D2 LTR MaLR 204 370 0 9 1321 282 216 13 39 chr15 96487807 96487884 -7007090 + GA-rich Low_complexity Low_complexity 2 76 0 9 1321 199 282 118 54 chr15 96488813 96488976 -7005998 + MIRm SINE MIR 51 225 -51 9 1321 477 327 45 18 chr15 96489063 96489284 -7005690 + MIR SINE MIR 12 238 -24 9 1321 198 103 0 0 chr15 96489931 96489960 -7005014 + (TTTCC)n Simple_repeat Simple_repeat 3 31 0 9 1321 271 254 28 14 chr15 96489984 96490056 -7004918 - ID4 SINE ID -9 74 2 9 1321 329 340 38 38 chr15 96490447 96490478 -7004496 + RLTR14 LTR ERV1 224 252 -130 9 1321 1078 152 182 5 chr15 96490478 96490670 -7004304 + URR1A DNA MER1_type 1 226 0 9 1321 329 340 38 38 chr15 96490670 96490797 -7004177 + RLTR14 LTR ERV1 253 381 -1 9 1321 376 191 186 31 chr15 96490923 96491020 -7003954 + PB1D7 SINE Alu 5 116 -4 9 1321 234 329 71 52 chr15 96491181 96491335 -7003639 - MIRb SINE MIR -24 244 88 9 1321 777 37 9 18 chr15 96492139 96492250 -7002724 + (GGAGA)n Simple_repeat Simple_repeat 2 111 0 9 1321 189 163 0 75 chr15 96492263 96492356 -7002618 + G-rich Low_complexity Low_complexity 1 86 0 9 1321 335 264 196 2 chr15 96492356 96492547 -7002427 + HAL1-3A_ME LINE L1 2285 2449 -409 9 1321 207 139 0 44 chr15 96493052 96493097 -7001877 + A-rich Low_complexity Low_complexity 5 47 0 9 1321 1246 189 14 0 chr15 96493338 96493550 -7001424 + B3 SINE B2 2 216 0 9 1321 3094 50 0 3 chr15 96493666 96494050 -7000924 - L1Md_F2 LINE L1 -2 6580 6198 9 1321 368 182 40 111 chr15 96494677 96494776 -7000198 + MTEa LTR MaLR 278 369 -10 9 1321 302 258 74 4 chr15 96494850 96495041 -6999933 + L1MD LINE L1 5195 5397 -746 9 1321 1339 79 10 31 chr15 96495065 96495261 -6999713 + B2_Mm2 SINE B2 2 193 -2 9 1321 447 316 99 0 chr15 96495284 96495455 -6999519 + L1MD LINE L1 5593 5780 -511 9 1321 2434 149 78 11 chr15 96495458 96495906 -6999068 + Lx4A LINE L1 6579 7056 -2 9 1321 27 62 0 0 chr15 96495913 96495961 -6999013 + AT_rich Low_complexity Low_complexity 1 48 0 9 1321 227 140 0 20 chr15 96495961 96496012 -6998962 + (TA)n Simple_repeat Simple_repeat 2 51 0 9 1321 333 268 52 32 chr15 96496035 96496189 -6998785 + Lx8 LINE L1 5750 5906 -1567 9 1321 200 296 0 0 chr15 96496194 96496248 -6998726 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 9 1321 2385 278 126 19 chr15 96496674 96497631 -6997343 + Lx9 LINE L1 6581 7640 -4 9 1321 252 191 29 73 chr15 96498177 96498245 -6996729 + L1M4c LINE L1 17 81 -6303 9 1321 553 106 59 0 chr15 96498322 96498407 -6996567 - B2_Mm1t SINE B2 -102 91 2 9 1321 1099 292 75 102 chr15 96498446 96499045 -6995929 + L1M4c LINE L1 228 848 -5536 9 1321 377 267 96 0 chr15 96499045 96499180 -6995794 + B1F1 SINE Alu 2 149 0 9 1321 1099 292 75 102 chr15 96499180 96499585 -6995389 + L1M4c LINE L1 849 1204 -5180 9 1321 641 24 24 0 chr15 96499808 96499890 -6995084 + (TTTC)n Simple_repeat Simple_repeat 2 85 0 9 1321 853 57 0 9 chr15 96502224 96502331 -6992643 + U6 snRNA snRNA 2 107 0 1 1321 669 186 283 20 chr15 96502331 96502529 -6992445 + Lx2B LINE L1 6741 6990 -10 2 1321 355 284 0 0 chr15 96502734 96502808 -6992166 + B3A SINE B2 5 78 -120 3 1321 679 92 18 0 chr15 96503286 96503395 -6991579 + (TTC)n Simple_repeat Simple_repeat 2 112 0 4 1321 1166 102 6 0 chr15 96503395 96503571 -6991403 + (TCC)n Simple_repeat Simple_repeat 2 178 0 5 1321 587 231 8 0 chr15 96503600 96503717 -6991257 - PB1D9 SINE Alu 0 120 3 6 1321 1135 213 151 67 chr15 96504002 96504138 -6990836 + MTD LTR MaLR 1 116 -303 7 1321 192 77 0 0 chr15 96504138 96504164 -6990810 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 8 1321 1135 213 151 67 chr15 96504164 96504399 -6990575 + MTD LTR MaLR 117 402 -17 7 1321 323 329 67 55 chr15 96505519 96505683 -6989291 - B4A SINE B4 -3 289 124 9 1321 1092 107 0 0 chr15 96505798 96505947 -6989027 + B1_Mur4 SINE Alu 2 150 0 1 1321 207 0 0 0 chr15 96505947 96505970 -6989004 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1321 195 100 0 0 chr15 96505968 96505998 -6988976 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 1 1321 370 353 103 45 chr15 96506810 96507208 -6987766 + MLT1J-int LTR MaLR 633 1053 -334 1 1321 212 0 36 0 chr15 96507382 96507410 -6987564 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1 1321 489 120 44 22 chr15 96507411 96507547 -6987427 + CT-rich Low_complexity Low_complexity 2 140 0 1 1321 297 331 47 16 chr15 96507689 96507818 -6987156 + L1M3 LINE L1 5461 5593 -587 1 1321 1685 317 118 144 chr15 96507958 96508130 -6986844 - MTE-int LTR MaLR -2 1578 1393 1 1321 551 228 8 42 chr15 96508130 96508249 -6986725 - PB1D10 SINE Alu -1 116 2 1 1321 1685 317 118 144 chr15 96508249 96509346 -6985628 - MTE-int LTR MaLR -188 1392 358 1 1321 496 261 0 0 chr15 96509346 96509457 -6985517 - PB1D10 SINE Alu -4 113 3 1 1321 1685 317 118 144 chr15 96509457 96509804 -6985170 - MTE-int LTR MaLR -1223 357 3 1 1321 207 0 0 0 chr15 96509856 96509879 -6985095 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1321 370 241 8 51 chr15 96509962 96510080 -6984894 - PB1D10 SINE Alu -3 114 2 2 1321 1284 89 0 0 chr15 96510746 96510926 -6984048 + (TCC)n Simple_repeat Simple_repeat 1 180 0 2 1321 940 151 0 11 chr15 96510929 96510968 -6984006 + polypyrimidine Low_complexity Low_complexity 142 180 0 2 1321 1188 111 0 0 chr15 96510968 96511148 -6983826 + (TCC)n Simple_repeat Simple_repeat 1 180 0 2 1321 940 151 0 11 chr15 96511148 96511223 -6983751 + polypyrimidine Low_complexity Low_complexity 67 141 0 2 1321 1173 113 0 0 chr15 96511223 96511400 -6983574 + (TCC)n Simple_repeat Simple_repeat 2 178 0 2 1321 940 151 0 11 chr15 96511400 96511465 -6983509 + polypyrimidine Low_complexity Low_complexity 2 66 0 2 1321 245 200 0 0 chr15 96511871 96511911 -6983063 + B2_Mm2 SINE B2 1 40 -155 2 1321 1093 96 7 0 chr15 96511912 96512058 -6982916 + B1_Mus1 SINE Alu 2 148 0 2 1321 222 62 0 0 chr15 96512062 96512094 -6982880 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 3 1321 576 232 110 21 chr15 96512101 96512246 -6982728 + B3 SINE B2 27 184 -32 3 1321 458 209 21 32 chr15 96513231 96513325 -6981649 + B3A SINE B2 1 93 -105 3 1321 489 277 149 18 chr15 96513390 96513666 -6981308 + Lx9 LINE L1 7326 7637 -7 3 1321 246 62 0 0 chr15 96513724 96513756 -6981218 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1321 1141 93 69 32 chr15 96514178 96514366 -6980608 + B2_Mm2 SINE B2 1 195 0 3 1321 351 0 0 0 chr15 96514512 96514551 -6980423 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1321 2562 171 97 78 chr15 96516045 96516635 -6978339 - MT2B LTR ERVL 0 601 1 3 1321 185 265 0 0 chr15 96517207 96517241 -6977733 + L2b LINE L2 3333 3366 -9 3 1321 1161 69 0 0 chr15 96517567 96517712 -6977262 - B1_Mm SINE Alu -2 145 1 3 1321 228 35 0 0 chr15 96520366 96520395 -6974579 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1321 398 20 20 0 chr15 96522502 96522553 -6972421 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 1321 336 266 128 0 chr15 96524717 96524811 -6970163 + PB1D9 SINE Alu 10 115 -5 4 1321 22 0 0 0 chr15 96526808 96526830 -6968144 + AT_rich Low_complexity Low_complexity 1 22 0 4 1321 180 0 0 0 chr15 96528264 96528284 -6966690 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1321 23 0 0 0 chr15 96528704 96528727 -6966247 + AT_rich Low_complexity Low_complexity 1 23 0 4 1321 29 0 0 0 chr15 96529279 96529308 -6965666 + GC_rich Low_complexity Low_complexity 1 29 0 4 1321 236 143 18 0 chr15 96529778 96529834 -6965140 + C-rich Low_complexity Low_complexity 5 61 0 4 1321 34 0 0 0 chr15 96529956 96529990 -6964984 + AT_rich Low_complexity Low_complexity 1 34 0 4 1321 195 153 16 48 chr15 96531938 96531991 -6962983 + GA-rich Low_complexity Low_complexity 2 53 0 4 1321 1294 17 23 6 chr15 96531991 96532165 -6962809 + (GGGAGA)n Simple_repeat Simple_repeat 1 177 0 5 1321 567 179 0 0 chr15 96532325 96532420 -6962554 + B3 SINE B2 2 96 -120 5 1321 395 223 15 117 chr15 96532536 96532673 -6962301 + B3 SINE B2 88 210 -6 5 1321 201 58 93 37 chr15 96533311 96533365 -6961609 + T-rich Low_complexity Low_complexity 4 60 0 5 1321 690 168 23 15 chr15 96533381 96533514 -6961460 - B1_Mus1 SINE Alu -13 135 2 5 1321 510 17 0 0 chr15 96533938 96533997 -6960977 + (TC)n Simple_repeat Simple_repeat 2 60 0 5 1321 198 0 0 0 chr15 96533997 96534018 -6960956 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 1321 483 295 65 0 chr15 96534028 96534167 -6960807 - B3A SINE B2 -50 148 1 5 1321 730 245 31 6 chr15 96534208 96534368 -6960606 + B3 SINE B2 1 164 -52 5 1321 405 317 83 0 chr15 96534398 96534543 -6960431 + MLT1F2 LTR MaLR 402 558 -2 5 1321 780 20 69 0 chr15 96534686 96534787 -6960187 - B1_Mm SINE Alu 0 147 40 5 1321 228 153 157 132 chr15 96534729 96534812 -6960162 - RLTR25B LTR ERVK -519 509 425 6 1321 300 98 0 0 chr15 96534883 96534924 -6960050 + 5S rRNA rRNA 1 41 -80 6 1321 569 209 36 0 chr15 96535775 96535885 -6959089 - B1_Mus2 SINE Alu -30 117 4 6 1321 390 286 58 7 chr15 96535931 96536086 -6958888 - Lx8 LINE L1 -10 7463 7301 6 1321 575 221 70 29 chr15 96536084 96536256 -6958718 - Lx8 LINE L1 -326 7147 6969 6 1321 1208 61 0 0 chr15 96536656 96536803 -6958171 + B1_Mus1 SINE Alu 2 148 0 6 1321 333 284 121 84 chr15 96536929 96537367 -6957607 - L1MA8 LINE L1 0 6291 5838 6 1321 776 139 36 21 chr15 96537425 96537565 -6957409 + B1_Mur4 SINE Alu 5 146 -4 6 1321 579 291 242 8 chr15 96537754 96538121 -6956853 - MLT1F1 LTR MaLR -3 566 114 6 1321 222 325 109 17 chr15 96541298 96541417 -6953557 - B1F1 SINE Alu -8 141 12 6 1321 310 261 147 61 chr15 96541431 96541594 -6953380 - MIR SINE MIR -46 216 40 6 1321 626 234 85 71 chr15 96541632 96541844 -6953130 + B3 SINE B2 1 215 -1 7 1321 30 45 0 0 chr15 96541881 96541925 -6953049 + AT_rich Low_complexity Low_complexity 1 44 0 7 1321 356 143 14 0 chr15 96542748 96542818 -6952156 + (TCCA)n Simple_repeat Simple_repeat 2 72 0 7 1321 475 281 141 66 chr15 96542904 96543102 -6951872 - B2_Mm2 SINE B2 -2 214 2 7 1321 2821 61 14 0 chr15 96543142 96543488 -6951486 + L1_Mus1 LINE L1 6215 6565 -2 7 1321 299 360 9 18 chr15 96543920 96544033 -6950941 - RSINE1 SINE B4 -51 114 3 7 1321 496 259 40 46 chr15 96544033 96544181 -6950793 - ID_B1 SINE B4 -74 218 80 7 1321 1389 56 79 0 chr15 96544431 96544609 -6950365 - B2_Mm1t SINE B2 0 193 2 7 1321 533 230 303 0 chr15 96544899 96545064 -6949910 + B3 SINE B2 2 216 0 7 1321 246 235 126 10 chr15 96545143 96545246 -6949728 + RSINE1 SINE B4 1 115 -50 7 1321 226 200 0 0 chr15 96545450 96545490 -6949484 + C-rich Low_complexity Low_complexity 1 40 0 8 1321 603 107 8 24 chr15 96545490 96545614 -6949360 - L1_Mus3 LINE L1 -4 6634 6513 8 1321 248 344 22 0 chr15 96545647 96545737 -6949237 + MIR SINE MIR 57 148 -114 8 1321 697 191 240 34 chr15 96545790 96545969 -6949005 + B3 SINE B2 1 216 0 8 1321 261 283 76 57 chr15 96546678 96546783 -6948191 - MIR SINE MIR -145 117 11 8 1321 327 199 161 0 chr15 96546786 96546952 -6948022 - Charlie1a DNA MER1_type -1 1454 1243 8 1321 771 194 124 16 chr15 96547057 96547251 -6947723 + B3 SINE B2 2 216 0 8 1321 216 235 0 0 chr15 96547344 96547395 -6947579 - MIR SINE MIR -117 91 41 8 1321 22 0 0 0 chr15 96548120 96548142 -6946832 + AT_rich Low_complexity Low_complexity 1 22 0 8 1321 405 0 0 0 chr15 96548432 96548477 -6946497 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 1321 805 109 18 31 chr15 96548514 96548741 -6946233 + (CAGAGA)n Simple_repeat Simple_repeat 1 224 0 9 1321 1221 68 0 0 chr15 96549721 96549868 -6945106 + B1_Mus2 SINE Alu 1 147 0 9 1321 279 113 0 0 chr15 96549868 96549921 -6945053 + (A)n Simple_repeat Simple_repeat 1 53 0 9 1321 1483 213 103 36 chr15 96550893 96551282 -6943692 - MTD LTR MaLR -2 417 3 9 1321 315 315 18 27 chr15 96551394 96551505 -6943469 - PB1D10 SINE Alu -7 110 1 9 1321 256 102 41 0 chr15 96551811 96551860 -6943114 + (GA)n Simple_repeat Simple_repeat 2 52 0 9 1321 1117 255 44 0 chr15 96552051 96552302 -6942672 + Lx8 LINE L1 6593 6854 -619 9 1321 632 203 93 8 chr15 96552304 96552433 -6942541 + B1_Mur2 SINE Alu 10 149 0 9 1321 1109 269 142 9 chr15 96552455 96552800 -6942174 + Lx8 LINE L1 6842 7232 -241 9 1321 1170 274 134 3 chr15 96552801 96553174 -6941800 + BGLII_Mus LTR ERVK 1 422 0 9 1321 681 274 115 9 chr15 96553177 96553394 -6941580 + Lx8 LINE L1 7231 7470 -3 9 1321 231 321 12 0 chr15 96553863 96553944 -6941030 + ID4_ SINE ID 2 83 0 9 1321 198 0 0 0 chr15 96553947 96553969 -6941005 + (CAAG)n Simple_repeat Simple_repeat 2 23 0 1 1321 187 208 62 0 chr15 96554046 96554094 -6940880 - L4 LINE RTE -1614 415 365 1 1321 2753 164 4 21 chr15 96554503 96554977 -6939997 + RMER4A LTR ERVK 1 466 0 1 1321 850 173 237 0 chr15 96555356 96555529 -6939445 - B3 SINE B2 0 216 3 1 1321 429 262 126 55 chr15 96555873 96556055 -6938919 - B3A SINE B2 0 198 4 1 1321 564 284 104 18 chr15 96556065 96556345 -6938629 - L2 LINE L2 -1308 2111 1808 1 1321 336 88 394 0 chr15 96556754 96556858 -6938116 - B2_Mm2 SINE B2 0 195 51 1 1321 1350 57 23 6 chr15 96556873 96557050 -6937924 - B2_Mm2 SINE B2 -14 181 2 1 1321 372 43 0 0 chr15 96557400 96557446 -6937528 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 1321 342 0 0 0 chr15 96557700 96557738 -6937236 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1321 1219 21 7 27 chr15 96558077 96558213 -6936761 + B1_Mm SINE Alu 2 138 -9 1 1321 217 0 0 57 chr15 96558213 96558248 -6936726 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 1 1321 1219 21 7 27 chr15 96558248 96558260 -6936714 + B1_Mm SINE Alu 139 147 0 1 1321 1035 134 0 0 chr15 96558407 96558549 -6936425 + B1_Mus2 SINE Alu 3 144 -3 1 1321 324 284 156 17 chr15 96560364 96560543 -6934431 - MLT1H2 LTR MaLR -8 481 278 1 1321 574 237 21 21 chr15 96560547 96560689 -6934285 + ID_B1 SINE B4 14 155 -69 1 1321 621 307 107 10 chr15 96560765 96561046 -6933928 + MLT1A LTR MaLR 49 408 0 1 1321 372 280 122 50 chr15 96561336 96561475 -6933499 + B1F SINE Alu 1 149 0 1 1321 429 20 0 0 chr15 96562127 96562177 -6932797 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1321 890 168 193 11 chr15 96563027 96563208 -6931766 + B3 SINE B2 1 214 -2 1 1321 208 347 105 20 chr15 96563741 96563894 -6931080 - MIR SINE MIR 0 262 97 1 1321 360 291 50 44 chr15 96563943 96564123 -6930851 + Tigger10 DNA Tigger 1543 1723 -120 1 1321 498 46 0 0 chr15 96565330 96565395 -6929579 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 1321 207 88 0 0 chr15 96565537 96565571 -6929403 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1321 1268 20 0 7 chr15 96565572 96565719 -6929255 - B1_Mus2 SINE Alu -1 146 1 1 1321 354 301 58 0 chr15 96565944 96566047 -6928927 + PB1D10 SINE Alu 9 117 0 1 1321 251 118 59 0 chr15 96566047 96566098 -6928876 + A-rich Low_complexity Low_complexity 2 55 0 1 1321 1279 266 53 9 chr15 96567137 96567474 -6927500 + ORR1D2 LTR MaLR 11 362 -8 1 1321 29 28 0 0 chr15 96567973 96568009 -6926965 + AT_rich Low_complexity Low_complexity 1 36 0 1 1321 516 213 0 0 chr15 96568078 96568200 -6926774 + (CCCTA)n Simple_repeat Simple_repeat 2 123 0 1 1321 207 0 0 0 chr15 96568657 96568680 -6926294 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1321 252 0 0 0 chr15 96568680 96568707 -6926267 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1321 1196 27 0 46 chr15 96568707 96568848 -6926126 - B1_Mm SINE Alu -9 138 2 1 1321 308 265 152 10 chr15 96569162 96569261 -6925713 - PB1D7 SINE Alu -5 115 3 1 1321 1019 177 61 19 chr15 96569889 96570102 -6924872 + URR1A DNA MER1_type 5 226 0 1 1321 1232 169 28 45 chr15 96570213 96570466 -6924508 - MTC LTR MaLR -156 223 1 1 1321 23 0 0 0 chr15 96570524 96570547 -6924427 + AT_rich Low_complexity Low_complexity 1 23 0 1 1321 859 176 152 11 chr15 96570547 96570725 -6924249 - B3 SINE B2 -9 207 5 1 1321 479 180 11 11 chr15 96570919 96571009 -6923965 - B3A SINE B2 -107 91 2 1 1321 424 231 213 44 chr15 96571679 96571928 -6923046 - B4A SINE B4 0 292 2 1 1321 691 211 100 24 chr15 96572171 96572341 -6922633 - B3A SINE B2 -12 186 4 1 1321 423 0 0 0 chr15 96572787 96572834 -6922140 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1321 219 321 4 65 chr15 96574009 96574123 -6920851 - MIRb SINE MIR -59 149 45 1 1321 509 211 381 0 chr15 96575160 96575307 -6919667 - B3 SINE B2 -11 205 3 1 1321 758 183 14 0 chr15 96575971 96576113 -6918861 + B1_Mur2 SINE Alu 6 149 0 1 1321 301 269 25 13 chr15 96576434 96576513 -6918461 - ID4 SINE ID -1 82 3 1 1321 21 36 0 0 chr15 96576665 96576693 -6918281 + AT_rich Low_complexity Low_complexity 1 28 0 1 1321 495 274 6 70 chr15 96576783 96576794 -6918180 - ID_B1 SINE B4 0 224 158 1 1321 810 178 0 7 chr15 96576794 96576930 -6918044 - B1_Mur4 SINE Alu -7 143 9 1 1321 368 336 92 22 chr15 96577158 96577386 -6917588 - L2a LINE L2 -2 3424 3181 1 1321 223 316 53 0 chr15 96577495 96577571 -6917403 + ID4_ SINE ID 3 82 -1 1 1321 278 322 82 57 chr15 96578043 96578165 -6916809 - Charlie4z DNA MER1_type -38 129 5 1 1321 262 300 28 91 chr15 96579415 96579558 -6915416 - MIRb SINE MIR -81 187 54 1 1321 288 0 0 0 chr15 96579583 96579615 -6915359 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1321 353 251 57 13 chr15 96580247 96580374 -6914600 - PB1D10 SINE Alu -20 129 1 1 1321 392 202 24 12 chr15 96580290 96580375 -6914599 - ID_B1 SINE B4 -58 166 81 1 1321 290 287 113 61 chr15 96580677 96580792 -6914182 - MER45A DNA Tip100 -3 175 55 1 1321 232 43 149 0 chr15 96580812 96580859 -6914115 + Lx3_Mus LINE L1 6948 7001 -8 1 1321 23 33 0 0 chr15 96580859 96580889 -6914085 + AT_rich Low_complexity Low_complexity 1 30 0 1 1321 1182 98 5 84 chr15 96580901 96581091 -6913883 + B2_Mm1t SINE B2 4 178 -15 1 1321 332 114 444 25 chr15 96581155 96581236 -6913738 + B2_Mm2 SINE B2 47 161 -34 1 1321 405 0 0 0 chr15 96581236 96581281 -6913693 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 1 1321 1227 35 7 0 chr15 96581292 96581435 -6913539 - B1_Mus1 SINE Alu -2 146 3 1 1321 228 331 113 64 chr15 96581940 96582143 -6912831 + MLT1I LTR MaLR 98 310 -101 1 1321 200 256 151 12 chr15 96582414 96582513 -6912461 + MIRc SINE MIR 61 175 -87 1 1321 263 98 0 24 chr15 96582794 96582836 -6912138 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 1321 488 146 0 11 chr15 96582836 96582898 -6912076 + polypurine Low_complexity Low_complexity 2 63 0 1 1321 1506 28 0 0 chr15 96582898 96583077 -6911897 + (GAA)n Simple_repeat Simple_repeat 1 179 0 1 1321 488 146 0 11 chr15 96583077 96583104 -6911870 + polypurine Low_complexity Low_complexity 64 90 0 1 1321 699 28 0 0 chr15 96583100 96583206 -6911768 + (GAAAA)n Simple_repeat Simple_repeat 1 106 0 1 1321 343 302 0 0 chr15 96583484 96583590 -6911384 + PB1D10 SINE Alu 3 108 -9 1 1321 5476 138 20 14 chr15 96584055 96584937 -6910037 + Lx2 LINE L1 6110 6997 0 1 1321 660 294 88 85 chr15 96584937 96585618 -6909356 + L1MA4 LINE L1 5344 6071 -1402 1 1321 181 270 132 26 chr15 96585831 96585907 -6909067 - MIR SINE MIR -67 141 58 1 1321 195 167 0 0 chr15 96587724 96587766 -6907208 + (TATATG)n Simple_repeat Simple_repeat 1 42 0 1 1321 261 191 75 60 chr15 96587857 96587924 -6907050 - PB1D10 SINE Alu -10 107 40 1 1321 288 0 0 0 chr15 96588679 96588711 -6906263 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1321 216 111 0 0 chr15 96588754 96588790 -6906184 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1321 1067 108 7 7 chr15 96588883 96589032 -6905942 - B1_Mur3 SINE Alu 0 149 1 1 1321 495 182 0 0 chr15 96589067 96589188 -6905786 + (TG)n Simple_repeat Simple_repeat 2 122 0 1 1321 732 245 143 23 chr15 96589189 96589448 -6905526 - B4A SINE B4 -2 290 1 1 1321 443 232 173 2 chr15 96590305 96590448 -6904526 - B3A SINE B2 -22 171 1 1 1321 21 36 0 0 chr15 96590448 96590476 -6904498 + AT_rich Low_complexity Low_complexity 1 28 0 1 1321 573 149 0 0 chr15 96590656 96590770 -6904204 + (TCCC)n Simple_repeat Simple_repeat 2 115 0 1 1321 181 267 48 48 chr15 96591041 96591104 -6903870 + MIRm SINE MIR 156 218 -58 1 1321 1034 76 0 7 chr15 96591228 96591374 -6903600 + (TCCC)n Simple_repeat Simple_repeat 2 146 0 1 1321 1050 106 0 0 chr15 96591374 96591515 -6903459 - B1_Mur4 SINE Alu -8 142 2 1 1321 233 254 155 0 chr15 96591540 96591611 -6903363 - Charlie7 DNA MER1_type -352 2260 2179 1 1321 520 190 37 31 chr15 96591664 96591677 -6903297 - Lx9 LINE L1 -1 7643 7634 1 1321 198 0 0 0 chr15 96591677 96591699 -6903275 + (TTTTC)n Simple_repeat Simple_repeat 2 23 0 1 1321 520 190 37 31 chr15 96591699 96591848 -6903126 - Lx9 LINE L1 -11 7633 7480 1 1321 696 173 0 10 chr15 96591848 96592152 -6902822 + (TG)n Simple_repeat Simple_repeat 1 300 0 1 1321 1629 225 16 19 chr15 96592177 96592548 -6902426 - Lx9 LINE L1 -213 7431 7062 1 1321 1101 84 21 0 chr15 96592622 96592765 -6902209 - B1_Mus1 SINE Alu -2 146 1 1 1321 486 281 53 19 chr15 96592794 96593001 -6901973 - Charlie7 DNA MER1_type -561 2051 1838 1 1321 454 244 52 9 chr15 96593012 96593128 -6901846 - MLT1F1 LTR MaLR -6 563 443 1 1321 469 277 78 57 chr15 96593096 96593119 -6901855 + CYRA11_Mm Unknown Y-chromosome 153 305 -312 1 1321 1270 135 29 9 chr15 96593119 96593329 -6901645 - URR1A DNA MER1_type -1 225 12 1 1321 469 277 78 57 chr15 96593329 96593341 -6901633 + CYRA11_Mm Unknown Y-chromosome 306 402 -215 1 1321 2266 211 89 6 chr15 96593752 96594292 -6900682 - RCHARR1 DNA MER1_type 0 974 390 1 1321 1152 270 112 62 chr15 96594292 96594837 -6900137 + Lx8 LINE L1 6444 7015 -458 1 1321 1506 222 106 5 chr15 96594875 96595242 -6899732 - MTD LTR MaLR -15 404 1 1 1321 228 333 40 16 chr15 96595253 96595378 -6899596 + Lx8 LINE L1 7049 7176 -297 1 1321 1217 288 85 8 chr15 96595663 96596027 -6898947 - RCHARR1 DNA MER1_type -581 393 2 1 1321 1515 48 16 0 chr15 96596031 96596219 -6898755 + B2_Mm2 SINE B2 2 192 -3 1 1321 195 141 0 45 chr15 96596389 96596456 -6898518 + A-rich Low_complexity Low_complexity 2 65 0 1 1321 489 240 53 123 chr15 96596515 96596686 -6898288 - B3 SINE B2 -15 201 43 1 1321 931 132 13 19 chr15 96596706 96596861 -6898113 - URR1B DNA MER1_type -13 212 59 1 1321 461 17 17 0 chr15 96597116 96597174 -6897800 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 1321 264 306 59 0 chr15 96597669 96597754 -6897220 + MTEa LTR MaLR 288 377 -2 2 1321 243 0 0 0 chr15 96598087 96598114 -6896860 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 2 1321 795 163 8 0 chr15 96598165 96598294 -6896680 + B1_Mur4 SINE Alu 13 142 -8 2 1321 472 116 11 11 chr15 96598294 96598381 -6896593 + (GGAA)n Simple_repeat Simple_repeat 1 87 0 2 1321 353 296 51 36 chr15 96598542 96598679 -6896295 - B1F SINE Alu -10 139 1 2 1321 182 174 0 21 chr15 96599528 96599575 -6895399 + CT-rich Low_complexity Low_complexity 2 47 0 2 1322 25 0 0 0 chr15 96600154 96600179 -6894795 + AT_rich Low_complexity Low_complexity 1 25 0 2 1322 239 279 0 48 chr15 96600991 96601074 -6893900 + GA-rich Low_complexity Low_complexity 3 81 0 2 1322 231 162 43 29 chr15 96603636 96603706 -6891268 + G-rich Low_complexity Low_complexity 5 75 0 2 1322 258 14 127 0 chr15 96604049 96604120 -6890854 + (GCTG)n Simple_repeat Simple_repeat 4 83 0 2 1322 297 0 0 0 chr15 96605582 96605615 -6889359 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1322 316 327 90 14 chr15 96605686 96605828 -6889146 + MIRb SINE MIR 67 234 -34 2 1322 1194 69 0 0 chr15 96606492 96606637 -6888337 - B1_Mus1 SINE Alu 0 148 4 2 1322 32 0 0 0 chr15 96607720 96607752 -6887222 + AT_rich Low_complexity Low_complexity 1 32 0 2 1322 435 318 60 8 chr15 96607792 96607925 -6887049 - RSINE1 SINE B4 -25 140 1 2 1322 1936 162 98 8 chr15 96610422 96610808 -6884166 + MTC LTR MaLR 1 421 0 2 1322 201 39 0 0 chr15 96611702 96611728 -6883246 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1322 636 107 0 0 chr15 96611755 96611858 -6883116 + (TG)n Simple_repeat Simple_repeat 1 103 0 2 1322 444 279 0 140 chr15 96611869 96611951 -6883023 - RSINE1 SINE B4 -17 148 74 2 1322 1148 75 123 6 chr15 96611951 96612113 -6882861 - B2_Mm2 SINE B2 -14 181 1 2 1322 444 279 0 140 chr15 96612113 96612201 -6882773 - RSINE1 SINE B4 -92 73 2 2 1322 1298 68 8 11 chr15 96613273 96613632 -6881342 + (TCTA)n Simple_repeat Simple_repeat 1 357 0 2 1322 1347 80 23 0 chr15 96613946 96614122 -6880852 + B2_Mm2 SINE B2 2 181 -14 2 1322 839 116 0 0 chr15 96614978 96615107 -6879867 - B1_Mus2 SINE Alu 0 147 19 2 1322 378 261 54 134 chr15 96615107 96615154 -6879820 - B4 SINE B4 -64 201 58 2 1322 228 279 48 112 chr15 96615920 96616045 -6878929 - RSINE1 SINE B4 -36 129 13 2 1322 5539 88 23 0 chr15 96616187 96616933 -6878041 - L1_Mus2 LINE L1 0 6566 5804 2 1322 862 82 13 20 chr15 96616940 96617089 -6877885 + (TTCTC)n Simple_repeat Simple_repeat 4 151 0 2 1322 1153 64 0 0 chr15 96617089 96617229 -6877745 - B1_Mus1 SINE Alu -8 140 1 2 1322 1324 282 117 26 chr15 96617310 96618071 -6876903 - Lx8 LINE L1 -1556 5917 5057 2 1322 851 249 184 3 chr15 96618071 96618353 -6876621 + MTD LTR MaLR 38 370 -49 2 1322 433 184 9 52 chr15 96618400 96618515 -6876459 + ORR1B1 LTR MaLR 32 141 -253 2 1322 288 195 0 25 chr15 96618516 96618595 -6876379 + ORR1A4 LTR MaLR 65 141 -253 2 1322 1731 139 20 10 chr15 96618582 96618988 -6875986 + ORR1A4 LTR MaLR 8 391 -3 2 1322 357 295 55 44 chr15 96619032 96619273 -6875701 - Lx8 LINE L1 -1987 4156 3871 2 1322 21 0 0 0 chr15 96619507 96619528 -6875446 + AT_rich Low_complexity Low_complexity 1 21 0 2 1322 267 150 0 0 chr15 96619812 96619872 -6875102 + (T)n Simple_repeat Simple_repeat 1 60 0 2 1322 42 109 0 0 chr15 96620033 96620208 -6874766 + AT_rich Low_complexity Low_complexity 1 175 0 2 1322 246 306 31 39 chr15 96621089 96621218 -6873756 + MLT1A0 LTR MaLR 1 128 -237 2 1322 304 256 127 113 chr15 96622713 96622844 -6872130 + RSINE1 SINE B4 9 144 -21 2 1322 363 60 0 0 chr15 96622844 96622894 -6872080 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1322 304 256 127 113 chr15 96622894 96622912 -6872062 + RSINE1 SINE B4 145 160 -5 2 1322 351 0 0 0 chr15 96623160 96623199 -6871775 + (T)n Simple_repeat Simple_repeat 1 39 0 2 1322 1181 48 7 0 chr15 96623537 96623682 -6871292 - B1_Mus2 SINE Alu 0 147 2 2 1322 407 290 6 49 chr15 96624020 96624183 -6870791 - MER57A-int LTR ERV1 -5946 241 86 2 1322 226 364 49 8 chr15 96624916 96625038 -6869936 - L2 LINE L2 -616 2803 2677 2 1322 313 324 13 66 chr15 96625119 96625271 -6869703 - MER2 DNA MER2_type -23 322 179 2 1322 332 321 42 14 chr15 96625634 96625776 -6869198 - MER2 DNA MER2_type -120 225 80 2 1322 949 154 0 0 chr15 96628408 96628551 -6866423 + B1_Mur4 SINE Alu 1 143 -7 2 1322 679 194 89 0 chr15 96628583 96628707 -6866267 + B1_Mus2 SINE Alu 1 135 -12 2 1322 615 281 58 26 chr15 96628722 96628912 -6866062 - ID_B1 SINE B4 -15 209 14 2 1322 296 235 59 0 chr15 96628855 96628923 -6866051 - BC1_Mm scRNA scRNA -78 74 3 2 1322 604 72 93 0 chr15 96628966 96629063 -6865911 - B1_Mus2 SINE Alu -1 146 41 2 1322 319 67 368 47 chr15 96629247 96629353 -6865621 - B2_Mm2 SINE B2 -9 186 47 2 1322 1158 136 11 0 chr15 96629393 96629570 -6865404 - B2_Mm1t SINE B2 -14 179 1 2 1322 258 192 0 0 chr15 96630804 96630856 -6864118 + (CATA)n Simple_repeat Simple_repeat 1 52 0 2 1322 264 201 22 0 chr15 96631015 96631077 -6863897 - L1MC LINE L1 -589 5770 5701 2 1322 288 275 61 97 chr15 96631180 96631345 -6863629 + B3A SINE B2 40 198 0 2 1322 611 269 19 0 chr15 96631532 96631688 -6863286 - B3 SINE B2 -6 210 52 2 1322 501 47 0 0 chr15 96632181 96632245 -6862729 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 1322 826 204 0 13 chr15 96632251 96632410 -6862564 - B3A SINE B2 -41 157 1 2 1322 1188 218 125 3 chr15 96632508 96632835 -6862139 - ORR1D2 LTR MaLR -3 367 1 2 1322 348 270 78 20 chr15 96633317 96633419 -6861555 - PB1D7 SINE Alu -3 117 10 2 1322 233 345 76 14 chr15 96634022 96634166 -6860808 + MIRb SINE MIR 51 203 -65 2 1322 546 16 0 0 chr15 96634214 96634277 -6860697 + (TA)n Simple_repeat Simple_repeat 2 64 0 2 1322 760 243 149 0 chr15 96634516 96634751 -6860223 + ORR1D2 LTR MaLR 6 275 -95 2 1322 1745 133 7 14 chr15 96634782 96635072 -6859902 + ORR1A2 LTR MaLR 1 288 -39 2 1322 33837 79 20 13 chr15 96635073 96637208 -6857766 + L1Md_F3 LINE L1 416 2532 -3351 2 1322 5104 63 0 0 chr15 96637208 96637839 -6857135 - L1Md_T LINE L1 0 6582 5952 2 1322 33837 48 27 4 chr15 96637839 96640794 -6854180 + L1Md_F3 LINE L1 2533 5585 -298 2 1322 8350 31 5 4 chr15 96640795 96641780 -6853194 + L1Md_F3 LINE L1 5587 6572 -12 2 1322 296 160 0 0 chr15 96641794 96641844 -6853130 + ORR1A2 LTR MaLR 269 318 -8 2 1322 513 190 270 26 chr15 96641848 96641957 -6853017 - Lx9 LINE L1 -20 7624 7517 2 1322 279 0 0 0 chr15 96641957 96641988 -6852986 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1322 483 18 0 0 chr15 96641988 96642044 -6852930 + (TTA)n Simple_repeat Simple_repeat 1 56 0 2 1322 513 190 270 26 chr15 96642044 96642122 -6852852 - Lx9 LINE L1 -128 7516 7391 2 1322 530 158 10 10 chr15 96642127 96642229 -6852745 + ORR1D2 LTR MaLR 267 368 -2 2 1322 2201 136 2 148 chr15 96643047 96643521 -6851453 + RMER19B LTR ERVK 1 405 -497 2 1322 1002 94 12 6 chr15 96643515 96643675 -6851299 + URR1A DNA MER1_type 66 226 0 2 1322 206 350 20 20 chr15 96643680 96643782 -6851192 - MIRc SINE MIR -102 166 65 2 1322 216 0 0 0 chr15 96644950 96644974 -6850000 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1322 244 311 94 22 chr15 96645079 96645217 -6849757 - MIRb SINE MIR -1 267 120 2 1322 1442 212 75 23 chr15 96645412 96645538 -6849436 + ORR1D2 LTR MaLR 5 154 -216 2 1322 2286 81 52 0 chr15 96645538 96645848 -6849126 + ORR1A2 LTR MaLR 1 326 -1 2 1322 1442 212 75 23 chr15 96645848 96646068 -6848906 + ORR1D2 LTR MaLR 155 369 -1 2 1322 1441 71 38 0 chr15 96647098 96647282 -6847692 + B2_Mm2 SINE B2 1 191 -4 2 1322 918 258 88 50 chr15 96647360 96647500 -6847474 - L1_Rod LINE L1 -19 5828 5684 2 1322 1666 193 96 21 chr15 96647500 96647886 -6847088 - MTD LTR MaLR 0 419 5 2 1322 918 261 89 49 chr15 96647886 96648140 -6846834 - L1_Rod LINE L1 -164 5683 5439 2 1322 252 205 176 90 chr15 96648301 96648489 -6846485 + RMER10A LTR ERVL 18 221 -221 2 1322 567 170 0 0 chr15 96648492 96648645 -6846329 + (CA)n Simple_repeat Simple_repeat 1 153 0 2 1322 687 169 0 0 chr15 96648673 96648850 -6846124 + (CA)n Simple_repeat Simple_repeat 2 178 0 2 1322 383 180 9 0 chr15 96648876 96648987 -6845987 + (CA)n Simple_repeat Simple_repeat 2 113 0 2 1322 3396 318 112 49 chr15 96649167 96649355 -6845619 - L1M2 LINE L1 -430 5447 5253 2 1322 180 125 0 0 chr15 96649355 96649387 -6845587 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1322 3396 322 58 62 chr15 96649387 96651072 -6843902 - L1M2 LINE L1 -855 5288 3660 2 1322 1728 194 16 68 chr15 96651072 96651514 -6843460 - MTC LTR MaLR -2 419 1 2 1322 3396 322 58 62 chr15 96651514 96652927 -6842047 - L1M2 LINE L1 -2484 3659 2207 2 1322 773 236 0 0 chr15 96652966 96653123 -6841851 - RSINE1 SINE B4 -8 157 1 2 1322 250 340 0 0 chr15 96653123 96653217 -6841757 - L1_Rod LINE L1 -3637 2210 2117 2 1322 329 328 16 47 chr15 96653440 96653632 -6841342 - MusHAL1 LINE L1 -2192 520 335 2 1322 1085 207 49 0 chr15 96653703 96653906 -6841068 - B3 SINE B2 -3 213 1 2 1322 1249 73 11 0 chr15 96654084 96654262 -6840712 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2 1322 714 86 26 0 chr15 96654262 96654378 -6840596 + (TCCC)n Simple_repeat Simple_repeat 2 120 0 2 1322 315 0 0 0 chr15 96654726 96654761 -6840213 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1322 213 232 179 0 chr15 96655013 96655069 -6839905 + B3 SINE B2 53 118 -98 2 1322 342 0 0 0 chr15 96655069 96655107 -6839867 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1322 1260 221 95 30 chr15 96655725 96656094 -6838880 + MTD LTR MaLR 13 405 -14 2 1322 634 206 15 7 chr15 96656987 96657124 -6837850 - B1_Mur2 SINE Alu -2 147 10 2 1322 442 190 20 0 chr15 96658409 96658509 -6836465 - MTC LTR MaLR -316 105 4 2 1322 3062 80 2 10 chr15 96658774 96659177 -6835797 - MTB LTR MaLR 0 400 1 2 1322 184 330 21 11 chr15 96659418 96659513 -6835461 - L2b LINE L2 -290 3085 2990 2 1322 314 267 11 0 chr15 96662064 96662154 -6832820 - MIR SINE MIR -108 154 64 2 1322 396 0 0 0 chr15 96662154 96662198 -6832776 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 2 1322 252 86 0 0 chr15 96662198 96662233 -6832741 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3 1322 2242 144 39 32 chr15 96664471 96664910 -6830064 + RMER10A LTR ERVL 1 442 0 3 1322 207 0 0 0 chr15 96665877 96665900 -6829074 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1322 653 190 49 37 chr15 96665930 96666094 -6828880 - B3 SINE B2 -7 209 44 3 1322 244 180 0 0 chr15 96666921 96666971 -6828003 - B3A SINE B2 -148 50 1 3 1322 658 186 0 17 chr15 96667076 96667196 -6827778 - PB1D9 SINE Alu 0 120 3 3 1322 345 47 0 0 chr15 96667265 96667308 -6827666 + (A)n Simple_repeat Simple_repeat 1 43 0 3 1322 1316 84 90 0 chr15 96667728 96667744 -6827230 - B2_Mm2 SINE B2 -1 194 179 3 1322 345 82 0 0 chr15 96667744 96667793 -6827181 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 3 1322 1316 84 90 0 chr15 96667793 96667954 -6827020 - B2_Mm2 SINE B2 -17 178 2 3 1322 440 259 43 14 chr15 96668308 96668449 -6826525 + B1_Mur2 SINE Alu 5 149 0 3 1322 195 45 21 64 chr15 96668472 96668519 -6826455 + (CAAAC)n Simple_repeat Simple_repeat 5 49 0 3 1322 2575 36 0 9 chr15 96668738 96669076 -6825898 + ORR1A0 LTR MaLR 1 335 -11 3 1322 1211 112 56 0 chr15 96669090 96669268 -6825706 - B2_Mm2 SINE B2 -7 188 1 3 1322 387 0 0 0 chr15 96669588 96669631 -6825343 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1322 245 208 0 0 chr15 96669731 96669779 -6825195 - L1M3de LINE L1 -4491 2243 2196 3 1322 347 186 90 17 chr15 96669873 96669987 -6824987 - PB1D10 SINE Alu -1 119 1 3 1322 621 296 63 25 chr15 96670191 96670510 -6824464 - L1M3de LINE L1 -4812 1841 1511 3 1322 23 0 0 0 chr15 96670517 96670540 -6824434 + GC_rich Low_complexity Low_complexity 1 23 0 3 1322 717 269 97 56 chr15 96670800 96671256 -6823718 - RLTR12B LTR ERVK -34 494 1 3 1322 635 148 12 36 chr15 96672049 96672217 -6822757 + GA-rich Low_complexity Low_complexity 1 164 0 3 1322 180 0 0 0 chr15 96672550 96672570 -6822404 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 1322 184 149 21 21 chr15 96672935 96672983 -6821991 + CT-rich Low_complexity Low_complexity 1 48 0 3 1322 192 308 0 30 chr15 96673653 96673720 -6821254 - MIR SINE MIR -86 122 58 3 1322 468 0 0 0 chr15 96675283 96675335 -6819639 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1322 345 50 0 48 chr15 96676407 96676470 -6818504 + (AGGGGG)n Simple_repeat Simple_repeat 1 60 0 3 1322 599 206 71 29 chr15 96676819 96676959 -6818015 + B1_Mur4 SINE Alu 5 150 0 3 1322 3257 156 25 12 chr15 96676959 96677567 -6817407 + L1_Mur2 LINE L1 4773 5430 -726 3 1322 222 217 0 0 chr15 96677568 96677637 -6817337 + A-rich Low_complexity Low_complexity 1 69 0 3 1322 226 0 0 56 chr15 96678652 96678688 -6816286 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1322 972 232 14 0 chr15 96678695 96678906 -6816068 - B3 SINE B2 -2 214 1 3 1322 338 367 86 30 chr15 96678919 96679292 -6815682 - L1M5 LINE L1 -757 5389 4996 3 1322 322 250 25 22 chr15 96679404 96679495 -6815479 + L1MC LINE L1 3847 3957 -2189 3 1322 826 254 65 68 chr15 96679520 96679812 -6815162 + B4A SINE B4 2 292 0 3 1322 189 213 0 0 chr15 96679864 96679911 -6815063 + (TATG)n Simple_repeat Simple_repeat 2 48 0 3 1322 683 218 7 0 chr15 96679933 96680234 -6814740 + (TA)n Simple_repeat Simple_repeat 1 303 0 3 1322 329 108 46 0 chr15 96680267 96680332 -6814642 - B2_Mm2 SINE B2 -8 187 120 3 1322 234 343 29 0 chr15 96680451 96680556 -6814418 + L1MC1 LINE L1 6077 6184 -149 3 1322 2111 138 57 79 chr15 96681607 96682010 -6812964 - ORR1B1 LTR MaLR 0 394 1 3 1322 21 0 0 0 chr15 96685185 96685206 -6809768 + AT_rich Low_complexity Low_complexity 1 21 0 3 1322 366 342 7 33 chr15 96685233 96685384 -6809590 - B1F SINE Alu -2 147 1 3 1322 423 259 104 0 chr15 96685753 96685888 -6809086 - B4A SINE B4 0 292 144 3 1322 2177 128 113 0 chr15 96686561 96686906 -6808068 - ORR1C2 LTR MaLR 0 384 1 3 1322 612 213 0 16 chr15 96687505 96687634 -6807340 - ID_B1 SINE B4 0 224 98 3 1322 916 159 241 0 chr15 96687832 96688002 -6806972 - B3 SINE B2 -5 211 1 3 1322 553 265 13 13 chr15 96688975 96689124 -6805850 - B1F SINE Alu 0 149 1 3 1322 513 0 0 0 chr15 96689445 96689502 -6805472 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1322 1220 48 0 7 chr15 96690772 96690920 -6804054 - B1_Mm SINE Alu 0 147 1 3 1322 241 250 0 0 chr15 96691566 96691618 -6803356 - ID_B1 SINE B4 -87 137 86 3 1322 441 145 0 0 chr15 96693825 96693901 -6801073 + (CCAA)n Simple_repeat Simple_repeat 3 78 0 3 1322 594 0 0 0 chr15 96694309 96694375 -6800599 + (TCTA)n Simple_repeat Simple_repeat 3 68 0 3 1322 628 220 8 8 chr15 96694624 96694757 -6800217 - ID_B1 SINE B4 -8 216 84 3 1322 228 311 0 0 chr15 96694841 96694915 -6800059 - ID2 SINE ID -8 75 2 3 1322 2213 139 70 3 chr15 96695256 96695625 -6799349 + ORR1B1 LTR MaLR 1 394 0 3 1322 247 281 50 40 chr15 96695873 96695968 -6799006 + B4A SINE B4 35 130 -162 3 1322 3078 26 0 0 chr15 96695968 96696314 -6798660 + ORR1A0 LTR MaLR 1 346 0 3 1322 423 0 0 0 chr15 96696821 96696868 -6798106 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 3 1322 939 90 62 0 chr15 96696869 96697013 -6797961 - B2_Mm2 SINE B2 -41 154 2 3 1322 451 238 185 6 chr15 96697594 96697767 -6797207 - L1MA8 LINE L1 -5 6286 6083 3 1322 1171 227 133 0 chr15 96697772 96698102 -6796872 - MTD LTR MaLR 0 419 46 3 1322 357 255 187 16 chr15 96698208 96698395 -6796579 - L1MA8 LINE L1 -219 6072 5854 3 1322 1166 84 0 9 chr15 96698998 96699226 -6795748 + (TTC)n Simple_repeat Simple_repeat 1 225 0 3 1322 530 124 0 11 chr15 96699226 96699316 -6795658 + (TCC)n Simple_repeat Simple_repeat 3 91 0 3 1322 1015 106 0 0 chr15 96699318 96699459 -6795515 - B1_Mus1 SINE Alu -6 142 2 3 1322 17538 40 1 1 chr15 96699702 96701813 -6793161 + L1Md_F2 LINE L1 3478 5586 -297 3 1322 7978 47 1 32 chr15 96701813 96702841 -6792133 + L1Md_F2 LINE L1 5587 6582 0 3 1322 249 119 0 0 chr15 96703379 96703421 -6791553 + (CAAT)n Simple_repeat Simple_repeat 1 42 0 3 1322 26 0 0 0 chr15 96703810 96703836 -6791138 + AT_rich Low_complexity Low_complexity 1 26 0 3 1322 399 97 300 58 chr15 96708853 96708973 -6786001 - B2_Mm2 SINE B2 0 195 47 3 1322 1232 120 11 0 chr15 96709020 96709195 -6785779 - B2_Mm1t SINE B2 -14 179 3 3 1322 463 259 8 8 chr15 96709821 96709938 -6785036 - PB1D10 SINE Alu 0 117 1 3 1322 424 288 119 0 chr15 96710360 96710478 -6784496 - RSINE1 SINE B4 -32 133 2 3 1322 1196 215 99 11 chr15 96710850 96711203 -6783771 - MTD LTR MaLR -14 405 22 3 1322 188 86 0 28 chr15 96711754 96711790 -6783184 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1322 247 324 123 11 chr15 96713145 96713332 -6781642 + MER33 DNA MER1_type 9 216 -108 3 1322 282 183 0 0 chr15 96713663 96713734 -6781240 + CT-rich Low_complexity Low_complexity 2 72 0 3 1322 270 0 0 0 chr15 96713734 96713764 -6781210 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1322 369 0 0 0 chr15 96713764 96713804 -6781170 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 1322 288 77 0 0 chr15 96714567 96714606 -6780368 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 3 1322 976 47 0 0 chr15 96714640 96714768 -6780206 - B2_Mm2 SINE B2 -67 128 1 3 1322 782 73 0 9 chr15 96714976 96715087 -6779887 + (TCC)n Simple_repeat Simple_repeat 1 110 0 3 1322 468 0 0 0 chr15 96715159 96715211 -6779763 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 1322 392 342 70 10 chr15 96715218 96715419 -6779555 + L4 LINE RTE 130 342 -1687 3 1322 224 100 0 24 chr15 96715905 96715946 -6779028 + (CAA)n Simple_repeat Simple_repeat 2 41 0 3 1322 414 39 0 0 chr15 96716033 96716085 -6778889 + (TTTTG)n Simple_repeat Simple_repeat 4 55 0 3 1322 214 277 167 10 chr15 96716732 96716834 -6778140 + L2a LINE L2 3307 3424 -2 3 1322 993 65 29 17 chr15 96717260 96717433 -6777541 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 3 1322 1922 283 123 21 chr15 96717930 96718789 -6776185 + Lx8 LINE L1 6521 7467 -6 3 1322 2182 100 3 12 chr15 96719400 96719735 -6775239 - IAPLTR1a_Mm LTR ERVK -5 332 1 3 1322 41790 18 10 12 chr15 96719737 96726236 -6768738 - IAPEz-int LTR ERVK -2 6479 6 3 1322 2174 103 3 12 chr15 96726236 96726571 -6768403 - IAPLTR1a_Mm LTR ERVK -5 332 1 3 1322 1590 298 58 101 chr15 96726741 96727584 -6767390 - L1M2 LINE L1 -1872 4271 3453 3 1322 1159 62 7 0 chr15 96727584 96727730 -6767244 - B1_Mus2 SINE Alu 0 147 1 3 1322 1357 83 50 0 chr15 96727736 96727917 -6767057 - B2_Mm2 SINE B2 -5 190 1 3 1322 1590 298 58 101 chr15 96727917 96728328 -6766646 - L1M2 LINE L1 -2691 3452 3065 3 1322 252 0 0 0 chr15 96728331 96728359 -6766615 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 3 1322 1213 55 0 0 chr15 96729275 96729421 -6765553 + B1_Mus1 SINE Alu 2 147 -1 3 1322 189 0 0 0 chr15 96729438 96729459 -6765515 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 3 1322 180 0 0 0 chr15 96730087 96730107 -6764867 + (GA)n Simple_repeat Simple_repeat 1 20 0 3 1323 643 243 8 7 chr15 96732127 96732311 -6762663 - B3A SINE B2 -6 210 26 3 1323 422 308 158 40 chr15 96732375 96732906 -6762068 - L1M4 LINE L1 -1184 4962 4369 3 1323 286 146 48 12 chr15 96732932 96733015 -6761959 + CT-rich Low_complexity Low_complexity 4 89 0 3 1323 434 309 68 20 chr15 96733019 96733267 -6761707 - Lx8 LINE L1 -60 7413 7154 3 1323 861 307 112 42 chr15 96733267 96734052 -6760922 - L1M4 LINE L1 -1764 4376 3537 3 1323 245 259 64 25 chr15 96734133 96734243 -6760731 - L1MA9 LINE L1 -30 6282 6167 3 1323 575 185 45 108 chr15 96734761 96734979 -6759995 - L1MA9 LINE L1 -187 6104 5886 3 1323 351 0 0 0 chr15 96735388 96735427 -6759547 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1323 999 283 52 81 chr15 96735468 96736063 -6758911 - L1M4 LINE L1 -2972 3174 2597 3 1323 253 309 0 30 chr15 96737637 96737737 -6757237 + MLT1A LTR MaLR 65 161 -213 3 1323 1175 68 0 7 chr15 96737883 96738032 -6756942 - B1_Mus1 SINE Alu 0 148 1 3 1323 366 23 0 0 chr15 96739376 96739419 -6755555 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 1323 405 0 0 0 chr15 96739419 96739463 -6755511 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1323 311 280 11 16 chr15 96739565 96739678 -6755296 + GA-rich Low_complexity Low_complexity 1 112 0 4 1323 192 284 0 0 chr15 96739916 96739983 -6754991 + (TA)n Simple_repeat Simple_repeat 2 68 0 4 1323 669 98 0 0 chr15 96740082 96740194 -6754780 + (TC)n Simple_repeat Simple_repeat 1 112 0 4 1323 1145 88 12 0 chr15 96741261 96741432 -6753542 + (TTTC)n Simple_repeat Simple_repeat 1 173 0 4 1323 501 32 0 0 chr15 96741940 96742003 -6752971 + (GA)n Simple_repeat Simple_repeat 2 64 0 4 1323 299 211 0 0 chr15 96743380 96743437 -6751537 + ID4 SINE ID 17 73 -10 4 1323 208 143 29 0 chr15 96743589 96743624 -6751350 + (TGG)n Simple_repeat Simple_repeat 3 38 0 4 1323 932 284 24 21 chr15 96743624 96743912 -6751062 - B4A SINE B4 -1 291 3 4 1323 256 220 0 0 chr15 96744062 96744112 -6750862 + ID4_ SINE ID 4 53 -30 4 1323 432 0 0 0 chr15 96744192 96744240 -6750734 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1323 432 0 0 0 chr15 96744991 96745039 -6749935 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1323 299 294 101 22 chr15 96745376 96745515 -6749459 - MER5A DNA MER1_type -1 188 39 4 1323 290 45 0 22 chr15 96746436 96746481 -6748493 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 4 1323 342 0 0 0 chr15 96747465 96747503 -6747471 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1323 33 0 0 0 chr15 96748195 96748228 -6746746 + AT_rich Low_complexity Low_complexity 1 33 0 4 1323 241 283 61 0 chr15 96748298 96748397 -6746577 - L1MC1 LINE L1 -13 6506 6402 4 1323 528 299 186 27 chr15 96748575 96749022 -6745952 - L1MC1 LINE L1 -405 6103 5586 4 1323 1874 104 94 67 chr15 96749027 96749204 -6745770 + L1_Mur1 LINE L1 2434 2627 -3259 4 1323 315 0 0 0 chr15 96749204 96749239 -6745735 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1323 1874 104 94 67 chr15 96749239 96749422 -6745552 + L1_Mur1 LINE L1 2628 2804 -3082 4 1323 3255 268 109 121 chr15 96749536 96752365 -6742609 - L1MC1 LINE L1 -922 5399 2606 4 1323 330 87 0 0 chr15 96752365 96752411 -6742563 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 4 1323 1165 56 7 0 chr15 96752421 96752563 -6742411 - B1_Mus1 SINE Alu -2 146 4 4 1323 3255 268 109 121 chr15 96752563 96752648 -6742326 - L1MC1 LINE L1 -3730 2591 2509 4 1323 349 230 205 44 chr15 96752975 96753180 -6741794 - L1MC1 LINE L1 -4581 1927 1690 4 1323 1541 22 21 16 chr15 96753883 96754070 -6740904 - B2_Mm1a SINE B2 -5 188 1 4 1323 2119 192 181 38 chr15 96754237 96754763 -6740211 - MT2B LTR ERVL 0 601 1 4 1323 596 243 51 26 chr15 96754805 96754961 -6740013 - RSINE1 SINE B4 -4 161 2 4 1323 1070 248 81 35 chr15 96754966 96755388 -6739586 - L1MC1 LINE L1 -5000 1508 1068 4 1323 383 293 37 98 chr15 96755398 96755644 -6739330 - L1_Mur3 LINE L1 -445 5435 5205 4 1323 628 259 82 38 chr15 96755643 96755880 -6739094 + L1MA4A LINE L1 5714 5961 -195 4 1323 238 280 13 0 chr15 96755883 96755958 -6739016 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 4 1323 695 332 82 19 chr15 96756111 96756587 -6738387 - L1MC1 LINE L1 -5443 1065 560 4 1323 644 333 86 40 chr15 96756642 96757070 -6737904 - L1MC1 LINE L1 -6060 448 1 4 1323 405 0 0 0 chr15 96759347 96759392 -6735582 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1323 197 108 27 0 chr15 96759405 96759442 -6735532 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 4 1323 396 328 43 29 chr15 96759920 96760127 -6734847 - B4A SINE B4 -81 211 2 4 1323 387 0 0 0 chr15 96760204 96760247 -6734727 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1323 816 200 0 0 chr15 96761465 96761635 -6733339 + CT-rich Low_complexity Low_complexity 2 171 0 4 1323 458 105 13 0 chr15 96761619 96761673 -6733301 + (TTCC)n Simple_repeat Simple_repeat 2 55 0 4 1323 555 16 0 0 chr15 96761673 96761737 -6733237 + (TC)n Simple_repeat Simple_repeat 2 65 0 4 1323 458 105 13 0 chr15 96761737 96761758 -6733216 + (TTCC)n Simple_repeat Simple_repeat 4 25 0 4 1323 190 250 215 11 chr15 96761874 96761967 -6733007 + MIR3 SINE MIR 75 186 -22 4 1323 645 112 52 17 chr15 96764408 96764580 -6730394 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 4 1323 260 288 73 0 chr15 96765512 96765850 -6729124 + (CCTG)n Simple_repeat Simple_repeat 1 362 0 4 1323 217 304 71 0 chr15 96765864 96766032 -6728942 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 4 1323 273 263 26 0 chr15 96766193 96766269 -6728705 + (TG)n Simple_repeat Simple_repeat 1 78 0 4 1323 254 281 159 37 chr15 96766269 96766376 -6728598 - B3 SINE B2 -94 122 3 4 1323 228 213 0 0 chr15 96766450 96766511 -6728463 + GA-rich Low_complexity Low_complexity 1 61 0 4 1323 1211 66 6 6 chr15 96767607 96767775 -6727199 + B2_Mm2 SINE B2 2 169 -26 4 1323 324 0 0 0 chr15 96767786 96767822 -6727152 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 1323 25 51 0 0 chr15 96768606 96768645 -6726329 + AT_rich Low_complexity Low_complexity 1 39 0 4 1323 364 84 60 0 chr15 96768670 96768753 -6726221 + (TCTA)n Simple_repeat Simple_repeat 3 90 0 4 1323 3983 139 30 9 chr15 96769510 96770150 -6724824 - Lx LINE L1 -1 6653 6001 4 1323 2686 74 0 6 chr15 96770150 96770503 -6724471 + Lx LINE L1 5663 6013 -641 4 1323 184 50 100 0 chr15 96770951 96770991 -6723983 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 4 1323 685 231 0 39 chr15 96771902 96772055 -6722919 - B1_Mur2 SINE Alu 0 149 3 4 1323 947 231 75 34 chr15 96772112 96772407 -6722567 + ORR1E LTR MaLR 1 307 -52 4 1323 653 242 85 5 chr15 96773184 96773383 -6721591 - B3 SINE B2 0 216 2 4 1323 1008 164 0 0 chr15 96773428 96773741 -6721233 + (CA)n Simple_repeat Simple_repeat 1 313 0 4 1323 628 128 78 0 chr15 96773925 96774027 -6720947 - B1_Mur2 SINE Alu -15 134 25 4 1323 307 242 71 40 chr15 96773947 96774046 -6720928 - MT2B LTR ERVL -344 257 156 4 1323 1012 108 7 13 chr15 96774047 96774197 -6720777 - B1_Mur4 SINE Alu 0 150 2 4 1323 473 283 156 0 chr15 96774284 96774457 -6720517 - B3 SINE B2 -7 209 10 4 1323 398 278 49 79 chr15 96774470 96774673 -6720301 - B3A SINE B2 -1 197 1 4 1323 238 93 0 53 chr15 96774974 96775031 -6719943 + (TTTTTG)n Simple_repeat Simple_repeat 1 54 0 4 1323 1167 62 0 0 chr15 96775031 96775177 -6719797 - B1_Mus2 SINE Alu -1 146 1 4 1323 204 78 38 38 chr15 96776635 96776688 -6718286 + (TTTG)n Simple_repeat Simple_repeat 3 55 0 4 1323 1096 77 14 0 chr15 96776690 96776833 -6718141 - B1_Mus2 SINE Alu 0 147 3 4 1323 801 214 127 11 chr15 96777110 96777299 -6717675 + B3 SINE B2 2 212 -4 4 1323 300 148 0 0 chr15 96777579 96777640 -6717334 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 1323 336 19 57 0 chr15 96777640 96777693 -6717281 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1323 4302 182 46 88 chr15 96778553 96779491 -6715483 + RMER1A Other Other 18 896 -134 4 1323 576 65 0 0 chr15 96779491 96779568 -6715406 + (TG)n Simple_repeat Simple_repeat 2 78 0 4 1323 4302 182 46 88 chr15 96779568 96779669 -6715305 + RMER1A Other Other 897 1013 -17 4 1323 559 294 120 42 chr15 96779744 96780003 -6714971 + B4 SINE B4 12 290 -2 4 1323 445 210 5 5 chr15 96780006 96780235 -6714739 + (CA)n Simple_repeat Simple_repeat 1 229 0 4 1323 485 226 0 6 chr15 96780270 96780639 -6714335 + (CA)n Simple_repeat Simple_repeat 1 366 0 4 1323 1283 4 64 0 chr15 96781471 96781969 -6713005 + (GGGAA)n Simple_repeat Simple_repeat 1 529 0 4 1323 189 182 0 0 chr15 96782826 96782881 -6712093 + A-rich Low_complexity Low_complexity 1 55 0 4 1323 434 309 65 0 chr15 96784771 96784972 -6710002 - Kanga1b DNA Tc2 -8 771 558 4 1323 491 118 47 0 chr15 96784978 96785063 -6709911 - URR1B DNA MER1_type 0 225 137 4 1323 476 297 51 13 chr15 96785250 96785407 -6709567 - RSINE1 SINE B4 -2 163 1 4 1323 262 320 65 82 chr15 96785518 96785885 -6709089 - L1ME3A LINE L1 -116 6057 5697 4 1323 223 222 29 29 chr15 96786648 96786718 -6708256 + (TATG)n Simple_repeat Simple_repeat 2 72 0 4 1323 533 114 9 0 chr15 96786718 96786823 -6708151 + (TCTA)n Simple_repeat Simple_repeat 2 107 0 4 1323 223 222 29 29 chr15 96786823 96786854 -6708120 + (TATG)n Simple_repeat Simple_repeat 3 33 0 4 1323 780 151 0 0 chr15 96786854 96787033 -6707941 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 4 1323 333 117 0 0 chr15 96788316 96788376 -6706598 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 1323 234 0 0 0 chr15 96788473 96788499 -6706475 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1323 202 224 0 17 chr15 96789473 96789532 -6705442 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 1323 808 239 6 0 chr15 96789537 96789717 -6705257 - B3A SINE B2 -17 181 1 4 1323 226 133 22 0 chr15 96790054 96790099 -6704875 - MLT2D LTR ERVL -2 558 513 4 1323 407 106 15 0 chr15 96790132 96790198 -6704776 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 1323 254 299 183 45 chr15 96790313 96790525 -6704449 - MT2A LTR ERVL -154 379 1 4 1323 319 283 91 8 chr15 96790525 96790646 -6704328 - MTE2a LTR MaLR -248 131 1 4 1323 210 358 49 0 chr15 96791067 96791148 -6703826 + PB1D10 SINE Alu 1 85 -32 4 1323 477 252 20 64 chr15 96791177 96791334 -6703640 + B4 SINE B4 99 248 -44 4 1323 189 74 0 0 chr15 96791395 96791422 -6703552 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1323 1401 130 41 18 chr15 96791686 96791906 -6703068 + URR1B DNA MER1_type 1 225 0 4 1323 2771 144 98 78 chr15 96792385 96793062 -6701912 - RMER6C LTR ERVK 0 690 1 4 1323 233 328 68 17 chr15 96793464 96793582 -6701392 + MIR3 SINE MIR 15 138 -70 4 1323 207 0 0 0 chr15 96793683 96793706 -6701268 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1323 860 250 24 68 chr15 96794554 96794923 -6700051 - Lx7 LINE L1 -4 7692 7340 4 1323 4595 182 47 16 chr15 96794921 96795504 -6699470 - L1_Mur3 LINE L1 -3609 2271 1681 4 1323 1370 70 48 5 chr15 96795504 96795691 -6699283 - B2_Mm2 SINE B2 0 195 1 4 1323 4595 182 47 16 chr15 96795691 96795947 -6699027 - L1_Mur3 LINE L1 -4200 1680 1402 4 1323 2522 95 3 0 chr15 96795947 96796273 -6698701 + ORR1A2 LTR MaLR 1 327 0 4 1323 4595 182 47 16 chr15 96796273 96796467 -6698507 - L1_Mur3 LINE L1 -4479 1401 1204 4 1323 2097 259 78 8 chr15 96796479 96797110 -6697864 - L1_Mur3 LINE L1 -6591 1137 463 4 1323 243 79 0 0 chr15 96797400 96797438 -6697536 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 4 1323 977 84 69 0 chr15 96797438 96797569 -6697405 - B1_Mus1 SINE Alu -8 140 1 4 1323 527 330 0 96 chr15 96797675 96797873 -6697101 + B3 SINE B2 24 202 -14 4 1323 462 36 0 0 chr15 96797873 96797929 -6697045 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 4 1323 402 310 39 7 chr15 96798558 96798773 -6696201 + MLT1H2 LTR MaLR 1 186 -303 5 1323 480 307 96 60 chr15 96799159 96799512 -6695462 - MLT1F2 LTR MaLR -92 468 53 5 1323 531 135 0 0 chr15 96799815 96799911 -6695063 + (TAGA)n Simple_repeat Simple_repeat 1 96 0 5 1323 521 259 131 6 chr15 96799925 96800100 -6694874 - B3 SINE B2 -8 208 12 5 1323 608 264 90 158 chr15 96800233 96800890 -6694084 - RLTR18 LTR ERVK -4 612 1 5 1323 1277 251 72 99 chr15 96801025 96801612 -6693362 + RMER4B LTR ERVK 15 585 0 5 1323 278 319 50 25 chr15 96801859 96801978 -6692996 - L3 LINE CR1 -62 4427 4306 5 1323 180 176 0 0 chr15 96802076 96802110 -6692864 + T-rich Low_complexity Low_complexity 1 34 0 5 1323 1225 54 0 0 chr15 96802110 96802257 -6692717 - B1_Mus2 SINE Alu 0 147 1 5 1323 1742 160 55 80 chr15 96802372 96802772 -6692202 + ORR1B1 LTR MaLR 5 394 0 5 1323 681 194 0 0 chr15 96806077 96806205 -6688769 + ID_B1 SINE B4 84 207 -17 5 1323 1010 226 73 128 chr15 96806242 96806916 -6688058 + Lx7 LINE L1 6803 7680 -16 5 1323 456 19 0 0 chr15 96806916 96806969 -6688005 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 5 1323 2330 114 0 15 chr15 96807025 96807355 -6687619 - ORR1A3 LTR MaLR 0 326 2 5 1323 218 106 0 21 chr15 96808239 96808287 -6686687 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 5 1323 1219 27 7 7 chr15 96808289 96808436 -6686538 - B1_Mm SINE Alu 0 147 1 5 1323 3121 11 43 0 chr15 96808504 96808856 -6686118 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1323 22809 32 25 14 chr15 96808856 96811571 -6683403 + IAPEz-int LTR ERVK 8 2751 -3730 5 1323 10835 7 0 0 chr15 96811563 96812735 -6682239 + IAPEz-int LTR ERVK 3244 4415 -2066 5 1323 6987 30 4 2 chr15 96812713 96813520 -6681454 + IAPEz-int LTR ERVK 5674 6481 0 5 1323 3121 11 43 0 chr15 96813520 96813872 -6681102 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1323 274 156 66 4 chr15 96813957 96814043 -6680931 + MTEa LTR MaLR 3 97 -322 5 1323 531 0 0 0 chr15 96814264 96814323 -6680651 + (TC)n Simple_repeat Simple_repeat 1 59 0 5 1323 480 332 72 41 chr15 96815087 96815432 -6679542 + MTEa LTR MaLR 24 379 0 5 1323 190 344 10 51 chr15 96815608 96815706 -6679268 - MIR SINE MIR -60 202 109 5 1323 636 148 0 0 chr15 96815864 96815986 -6678988 + (TC)n Simple_repeat Simple_repeat 1 122 0 5 1323 564 285 75 29 chr15 96816761 96817039 -6677935 + L1MB2 LINE L1 5537 5827 -344 5 1323 559 266 52 16 chr15 96817280 96817444 -6677530 + B3A SINE B2 1 173 -25 5 1323 195 42 0 0 chr15 96817444 96817468 -6677506 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1323 559 266 52 16 chr15 96817468 96817494 -6677480 + B3A SINE B2 174 198 0 5 1323 1232 91 28 0 chr15 96817608 96817784 -6677190 + B2_Mm2 SINE B2 1 181 -14 5 1323 349 128 364 9 chr15 96817816 96817926 -6677048 + B2_Mm2 SINE B2 47 195 0 5 1323 32 0 0 0 chr15 96817926 96817958 -6677016 + AT_rich Low_complexity Low_complexity 1 32 0 5 1323 306 0 0 0 chr15 96818025 96818059 -6676915 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1323 576 0 0 0 chr15 96818450 96818514 -6676460 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 1323 1089 96 7 0 chr15 96818515 96818661 -6676313 - B1_Mus1 SINE Alu 0 148 2 5 1323 1377 142 7 84 chr15 96819038 96819451 -6675523 + ORR1B1 LTR MaLR 4 393 -1 5 1323 273 301 58 52 chr15 96819451 96819586 -6675388 - ORR1E LTR MaLR -223 136 1 5 1323 715 299 84 123 chr15 96819721 96820158 -6674816 - L1MDa LINE L1 -3143 3394 2980 5 1323 776 294 49 4 chr15 96820158 96820424 -6674550 - B4A SINE B4 -14 278 1 5 1323 715 299 84 123 chr15 96820424 96820651 -6674323 - L1MDa LINE L1 -3558 2979 2753 5 1323 1201 68 0 0 chr15 96820651 96820798 -6674176 + B1_Mus1 SINE Alu 2 148 0 5 1323 715 299 84 123 chr15 96820798 96821062 -6673912 - L1MDa LINE L1 -3785 2752 2501 5 1323 21 36 0 0 chr15 96821362 96821390 -6673584 + AT_rich Low_complexity Low_complexity 1 28 0 5 1323 1192 57 0 0 chr15 96821390 96821548 -6673426 + B2_Mm1t SINE B2 1 158 -35 5 1323 201 74 0 0 chr15 96821549 96821576 -6673398 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1323 426 240 28 13 chr15 96821590 96821702 -6673272 + B1_Mur2 SINE Alu 34 142 -7 5 1323 410 303 75 83 chr15 96821707 96822189 -6672785 - L1MDa LINE L1 -4493 2140 1663 5 1323 279 266 84 48 chr15 96822210 96822376 -6672598 - Kanga1b DNA Tc2 -139 640 469 5 1323 1983 212 17 0 chr15 96822376 96822781 -6672193 + Lx5 LINE L1 6639 7050 0 5 1323 1409 75 16 21 chr15 96823058 96823249 -6671725 - B2_Mm2 SINE B2 -5 190 1 5 1323 4162 124 37 3 chr15 96823312 96823953 -6671021 + Lx4A LINE L1 6393 7055 -3 5 1323 346 223 16 0 chr15 96824554 96824675 -6670299 + GA-rich Low_complexity Low_complexity 2 124 0 5 1323 572 258 91 61 chr15 96824749 96824916 -6670058 + MLT1D LTR MaLR 258 436 -69 5 1323 251 308 28 18 chr15 96824916 96825025 -6669949 - PB1D10 SINE Alu -7 110 1 5 1323 572 258 91 61 chr15 96825025 96825088 -6669886 + MLT1D LTR MaLR 437 495 -10 5 1323 246 32 0 0 chr15 96830173 96830204 -6664770 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1323 237 297 21 21 chr15 96830256 96830349 -6664625 - L1MB2 LINE L1 -10 6161 6069 5 1323 1065 241 116 14 chr15 96833325 96833754 -6661220 + RLTR16 LTR ERVK 1 473 -32 5 1323 206 32 32 0 chr15 96835426 96835457 -6659517 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 1323 308 167 0 0 chr15 96835486 96835540 -6659434 + B2_Mm1t SINE B2 49 102 -91 5 1323 361 233 98 110 chr15 96835495 96835536 -6659438 + B4A SINE B4 57 218 -74 5 1323 914 65 0 0 chr15 96835536 96835659 -6659315 + B1_Mus1 SINE Alu 17 139 -9 5 1323 887 92 0 8 chr15 96835659 96835791 -6659183 + (GAAA)n Simple_repeat Simple_repeat 2 132 0 5 1323 364 173 27 0 chr15 96835791 96835866 -6659108 + B2_Mm1t SINE B2 103 179 -14 5 1323 377 109 0 0 chr15 96835894 96835949 -6659025 + B2_Mm2 SINE B2 47 101 -94 5 1323 189 0 0 0 chr15 96835974 96835995 -6658979 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 5 1323 24 0 0 0 chr15 96836008 96836032 -6658942 + AT_rich Low_complexity Low_complexity 1 24 0 5 1323 378 0 0 0 chr15 96836074 96836116 -6658858 + (TCTA)n Simple_repeat Simple_repeat 2 43 0 5 1323 261 0 0 0 chr15 96836393 96836422 -6658552 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 5 1323 234 0 0 0 chr15 96836689 96836715 -6658259 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 5 1323 288 0 0 0 chr15 96836797 96836829 -6658145 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1323 791 269 9 26 chr15 96836830 96837059 -6657915 - B4A SINE B4 -18 274 50 5 1323 42 48 0 0 chr15 96837940 96838003 -6656971 + AT_rich Low_complexity Low_complexity 1 63 0 5 1323 432 0 0 0 chr15 96838341 96838389 -6656585 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1323 531 316 166 0 chr15 96838407 96838600 -6656374 - B4A SINE B4 -64 228 4 5 1323 438 20 0 0 chr15 96841512 96841563 -6653411 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1323 236 259 0 16 chr15 96841709 96841783 -6653191 + BC1_Mm scRNA scRNA 4 76 -7 5 1323 212 170 57 0 chr15 96842812 96842865 -6652109 + A-rich Low_complexity Low_complexity 2 57 0 5 1323 1123 89 0 7 chr15 96843038 96843185 -6651789 + B1_Mus2 SINE Alu 1 146 -1 5 1323 364 253 22 0 chr15 96844563 96844654 -6650320 + PB1D10 SINE Alu 4 96 -21 5 1323 569 171 16 49 chr15 96847976 96848099 -6646875 + B1_Mus2 SINE Alu 9 127 -20 5 1323 372 191 0 0 chr15 96848099 96848188 -6646786 + (CTAA)n Simple_repeat Simple_repeat 2 90 0 5 1323 1350 106 16 0 chr15 96848523 96848712 -6646262 + B2_Mm2 SINE B2 3 194 -1 5 1323 585 105 0 0 chr15 96850568 96850654 -6644320 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 5 1323 291 285 98 0 chr15 96851751 96851874 -6643100 + L1MEg LINE L1 871 1005 -5079 5 1323 231 36 0 0 chr15 96852374 96852402 -6642572 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 5 1323 230 156 0 0 chr15 96852408 96852453 -6642521 - Lx4A LINE L1 0 7058 7014 5 1323 363 281 0 10 chr15 96852635 96852732 -6642242 + Tigger5 DNA MER2_type 2307 2402 -4 5 1323 1075 134 11 5 chr15 96852771 96852958 -6642016 + RMER10B LTR ERVL 1 188 -210 5 1323 21 57 0 0 chr15 96852970 96853005 -6641969 + AT_rich Low_complexity Low_complexity 1 35 0 5 1323 276 231 0 0 chr15 96853191 96853256 -6641718 + C-rich Low_complexity Low_complexity 1 65 0 5 1323 699 46 0 0 chr15 96853717 96853804 -6641170 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 5 1323 889 291 71 68 chr15 96853804 96854243 -6640731 + Lx9 LINE L1 6998 7437 -207 5 1323 229 264 0 65 chr15 96854988 96855081 -6639893 + MLT2B2 LTR ERVL 38 124 -391 5 1323 552 297 112 95 chr15 96855083 96855492 -6639482 + MLT2B2 LTR ERVL 33 448 -67 5 1323 200 34 0 33 chr15 96856180 96856210 -6638764 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 5 1323 242 293 25 0 chr15 96856487 96856603 -6638371 - MIRb SINE MIR -24 244 120 5 1323 183 276 0 0 chr15 96857939 96857998 -6636976 + L2a LINE L2 3019 3080 -346 5 1323 1238 120 71 60 chr15 96858661 96858927 -6636047 + RMER10A LTR ERVL 18 286 -156 5 1323 306 339 40 61 chr15 96859638 96859836 -6635138 + B4 SINE B4 1 194 -98 5 1323 313 247 101 0 chr15 96860000 96860089 -6634885 + B1F SINE Alu 52 149 0 5 1323 726 96 0 0 chr15 96861001 96861105 -6633869 + (TC)n Simple_repeat Simple_repeat 1 104 0 5 1323 22 0 0 0 chr15 96861973 96861995 -6632979 + AT_rich Low_complexity Low_complexity 1 22 0 5 1324 337 308 0 101 chr15 96863589 96863606 -6631368 + ID_B1 SINE B4 78 210 -14 5 1324 670 210 0 53 chr15 96863606 96863737 -6631237 + B1_Mus1 SINE Alu 11 134 -14 5 1324 393 22 0 0 chr15 96863737 96863783 -6631191 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 5 1324 204 40 0 0 chr15 96863863 96863888 -6631086 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 5 1324 404 48 32 0 chr15 96865156 96865218 -6629756 + (TTTTC)n Simple_repeat Simple_repeat 2 65 0 5 1324 299 322 0 50 chr15 96865256 96865377 -6629597 - PB1D10 SINE Alu -2 115 1 5 1324 681 103 256 0 chr15 96865398 96865515 -6629459 - B1_Mus1 SINE Alu 0 148 2 5 1324 578 135 10 0 chr15 96865654 96865758 -6629216 + (TTCC)n Simple_repeat Simple_repeat 1 105 0 6 1324 344 270 0 63 chr15 96865790 96865885 -6629089 - ID_B1 SINE B4 -28 196 108 6 1324 297 0 0 0 chr15 96866260 96866293 -6628681 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1324 421 238 75 81 chr15 96866972 96867146 -6627828 + B4A SINE B4 2 174 -118 6 1324 486 0 0 0 chr15 96867212 96867266 -6627708 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1324 225 253 21 32 chr15 96867271 96867365 -6627609 + (CATA)n Simple_repeat Simple_repeat 4 96 0 6 1324 186 43 0 0 chr15 96867523 96867546 -6627428 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 1324 402 94 0 0 chr15 96868086 96868150 -6626824 + (GGTTG)n Simple_repeat Simple_repeat 5 68 0 6 1324 902 110 7 0 chr15 96868167 96868303 -6626671 - B1_Mus1 SINE Alu 0 148 12 6 1324 315 225 37 12 chr15 96868497 96868578 -6626396 + MTEa LTR MaLR 290 372 -7 6 1324 333 68 0 0 chr15 96868943 96868987 -6625987 + (TGG)n Simple_repeat Simple_repeat 2 45 0 6 1324 569 165 44 110 chr15 96868989 96869125 -6625849 + B1_Mus1 SINE Alu 19 145 -3 6 1324 195 140 120 0 chr15 96869332 96869382 -6625592 + L2a LINE L2 3370 3425 -1 6 1324 1166 58 0 0 chr15 96869536 96869674 -6625300 + B1_Mus2 SINE Alu 1 138 -9 6 1324 1081 222 169 17 chr15 96869695 96870044 -6624930 + Lx9 LINE L1 7235 7636 -8 6 1324 345 344 39 69 chr15 96871046 96871249 -6623725 + MIR SINE MIR 44 240 -22 6 1324 459 250 18 9 chr15 96871328 96871441 -6623533 + PB1D10 SINE Alu 3 116 -1 6 1324 212 59 29 0 chr15 96871448 96871482 -6623492 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1324 504 0 0 0 chr15 96872350 96872406 -6622568 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 1324 285 260 39 0 chr15 96873588 96873665 -6621309 - ID4 SINE ID -3 80 1 6 1324 338 298 71 49 chr15 96875023 96875249 -6619725 - L1MB1 LINE L1 -78 6090 5860 6 1324 1520 277 144 64 chr15 96875260 96876742 -6618232 - L1M3 LINE L1 -500 5812 4212 6 1324 246 245 171 48 chr15 96876742 96876888 -6618086 + RSINE1 SINE B4 2 165 0 6 1324 190 271 14 28 chr15 96877690 96877762 -6617212 - MIRc SINE MIR -103 165 95 6 1324 615 172 0 27 chr15 96878481 96878666 -6616308 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 1324 214 325 88 31 chr15 96880899 96881058 -6613916 - MIR SINE MIR -47 215 48 6 1324 180 0 0 0 chr15 96881519 96881539 -6613435 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 1324 336 48 0 0 chr15 96881543 96881585 -6613389 + (TGG)n Simple_repeat Simple_repeat 3 44 0 6 1324 419 305 86 68 chr15 96881759 96882051 -6612923 + RMER15 LTR ERVL 265 561 -14 6 1324 1147 43 21 0 chr15 96882099 96882240 -6612734 + B1_Mus1 SINE Alu 5 148 0 6 1324 185 86 57 0 chr15 96882285 96882320 -6612654 + (TCTCTG)n Simple_repeat Simple_repeat 2 38 0 6 1324 382 354 47 9 chr15 96882345 96882559 -6612415 + B4A SINE B4 51 272 -20 6 1324 39 38 0 0 chr15 96883166 96883219 -6611755 + AT_rich Low_complexity Low_complexity 1 53 0 6 1324 209 274 25 69 chr15 96883699 96883814 -6611160 + L2c LINE L2 3022 3139 -248 6 1324 616 146 187 0 chr15 96883819 96883942 -6611032 + B1_Mus1 SINE Alu 2 147 -1 6 1324 696 209 47 42 chr15 96884400 96884590 -6610384 + URR1A DNA MER1_type 27 217 -9 6 1324 360 133 0 0 chr15 96886155 96886215 -6608759 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 1324 251 183 33 16 chr15 96887202 96887263 -6607711 - L1_Rod LINE L1 -162 5685 5624 6 1324 323 60 20 0 chr15 96887375 96887425 -6607549 + (TC)n Simple_repeat Simple_repeat 2 52 0 6 1324 423 0 0 0 chr15 96887425 96887472 -6607502 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1324 1076 209 30 0 chr15 96888066 96888267 -6606707 - B3 SINE B2 -6 210 4 6 1324 207 0 0 0 chr15 96888311 96888334 -6606640 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1324 251 346 38 9 chr15 96889802 96889907 -6605067 - L2c LINE L2 -8 3379 3272 6 1324 757 269 138 20 chr15 96891206 96891460 -6603514 + B4A SINE B4 5 288 -4 6 1324 794 240 67 15 chr15 96891524 96891719 -6603255 + RLTR18B LTR ERVK 1 205 -307 6 1324 460 252 70 31 chr15 96891824 96891980 -6602994 + RLTR18B LTR ERVK 296 511 -105 6 1324 1088 162 70 11 chr15 96891991 96892178 -6602796 - URR1B DNA MER1_type -27 198 1 6 1324 479 260 10 0 chr15 96892178 96892282 -6602692 + RLTR18B LTR ERVK 402 506 -6 6 1324 617 189 9 0 chr15 96893337 96893448 -6601526 + URR1A DNA MER1_type 7 118 -108 6 1324 315 218 0 0 chr15 96893449 96893504 -6601470 + URR1A DNA MER1_type 171 225 -1 6 1324 1150 14 21 0 chr15 96894373 96894516 -6600458 + (TTTC)n Simple_repeat Simple_repeat 2 147 0 6 1324 246 203 27 0 chr15 96894942 96895016 -6599958 + (TTTG)n Simple_repeat Simple_repeat 1 76 0 6 1324 219 36 0 0 chr15 96895040 96895068 -6599906 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 6 1324 1170 55 0 14 chr15 96895068 96895206 -6599768 - B1_Mus1 SINE Alu -9 139 2 6 1324 214 317 202 43 chr15 96897246 96897434 -6597540 + MIR SINE MIR 23 240 -22 6 1324 304 213 82 41 chr15 96897438 96897536 -6597438 - MLT1A1 LTR MaLR 0 408 307 6 1324 230 333 0 0 chr15 96897610 96897664 -6597310 + RMER15 LTR ERVL 1 54 -521 6 1324 225 0 0 0 chr15 96897713 96897738 -6597236 + (TG)n Simple_repeat Simple_repeat 1 25 0 6 1324 465 19 0 0 chr15 96897738 96897791 -6597183 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 1324 1045 256 77 29 chr15 96897791 96898101 -6596873 + RMER15 LTR ERVL 34 358 -217 6 1324 227 276 72 31 chr15 96898676 96898773 -6596201 - MIR3 SINE MIR -24 184 84 6 1324 668 247 47 0 chr15 96899612 96899782 -6595192 + B3 SINE B2 36 213 -3 6 1324 812 241 125 19 chr15 96899882 96900195 -6594779 + L1M4b LINE L1 840 1185 -6149 6 1324 290 290 101 18 chr15 96900271 96900380 -6594594 - MTE2a LTR MaLR -242 137 20 6 1324 513 335 88 77 chr15 96900452 96900931 -6594043 - MT2A LTR ERVL -13 520 37 6 1324 512 270 65 126 chr15 96900954 96901382 -6593592 + L1M4b LINE L1 1354 1755 -5579 6 1324 232 268 131 21 chr15 96901432 96901577 -6593397 + L1M4b LINE L1 1822 1982 -5026 6 1324 307 229 14 3 chr15 96901733 96901826 -6593148 + L1M4b LINE L1 2279 2406 -4681 6 1324 413 244 68 31 chr15 96902048 96902209 -6592765 + L1M4b LINE L1 2658 2824 -4510 6 1324 405 0 0 0 chr15 96902266 96902311 -6592663 + (TAA)n Simple_repeat Simple_repeat 1 45 0 6 1324 1208 48 7 0 chr15 96902409 96902555 -6592419 - B1_Mus1 SINE Alu 0 148 2 6 1324 258 333 32 0 chr15 96902616 96902742 -6592232 - L1M2 LINE L1 -1305 4835 4706 6 1324 213 143 94 43 chr15 96902765 96902882 -6592092 + (GTTTG)n Simple_repeat Simple_repeat 2 124 0 6 1324 238 107 33 82 chr15 96902815 96902876 -6592098 + (TTGG)n Simple_repeat Simple_repeat 2 59 0 6 1324 310 258 58 42 chr15 96902889 96903043 -6591931 - L1M2 LINE L1 -1440 4700 4531 6 1324 1491 288 168 15 chr15 96903142 96903755 -6591219 - MTE-int LTR MaLR -317 1263 557 6 1324 468 285 65 29 chr15 96903777 96903947 -6591027 - MTE-int LTR MaLR -1179 401 226 6 1324 884 154 123 50 chr15 96903943 96904162 -6590812 + RLTR28 LTR ERVL 274 508 -16 6 1324 443 257 44 9 chr15 96904189 96904303 -6590671 - MTE-int LTR MaLR -1425 155 38 6 1324 917 238 73 84 chr15 96904322 96904693 -6590281 + RMER17C LTR ERVK 44 410 0 6 1324 291 184 41 0 chr15 96904693 96904742 -6590232 - MTE-int LTR MaLR -1529 51 1 6 1324 198 103 0 0 chr15 96904849 96904878 -6590096 + (GGAA)n Simple_repeat Simple_repeat 3 31 0 6 1324 688 335 0 5 chr15 96904922 96905111 -6589863 - MTE2a LTR MaLR -133 246 59 6 1324 242 178 135 14 chr15 96905395 96905469 -6589505 - MTE2a LTR MaLR -272 107 25 6 1324 1603 164 38 76 chr15 96906577 96907000 -6587974 + RMER17C LTR ERVK 3 409 -1 6 1324 204 67 0 0 chr15 96907298 96907328 -6587646 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 1324 444 336 20 0 chr15 96907331 96907480 -6587494 - RSINE1 SINE B4 -12 153 2 6 1324 248 291 49 106 chr15 96907869 96907992 -6586982 - MTEa LTR MaLR -1 378 263 6 1324 1159 213 104 46 chr15 96908517 96908862 -6586112 - ORR1D2 LTR MaLR -4 366 2 6 1324 1358 60 49 5 chr15 96909260 96909444 -6585530 + B2_Mm2 SINE B2 2 193 -2 6 1324 979 130 6 6 chr15 96909444 96909614 -6585360 + (GAA)n Simple_repeat Simple_repeat 2 171 0 6 1324 2946 156 59 30 chr15 96910361 96910618 -6584356 - RMER4B LTR ERVK 0 585 323 6 1324 351 0 0 0 chr15 96910618 96910657 -6584317 + (TC)n Simple_repeat Simple_repeat 2 40 0 6 1324 2946 156 59 30 chr15 96910657 96910956 -6584018 - RMER4B LTR ERVK -263 322 13 6 1324 3148 274 88 72 chr15 96910971 96911861 -6583113 + Lx8 LINE L1 6097 6996 -477 6 1324 360 0 0 0 chr15 96911861 96911901 -6583073 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1324 3148 274 88 72 chr15 96911901 96912030 -6582944 + Lx8 LINE L1 6997 7115 -358 6 1324 1296 20 0 0 chr15 96912030 96912176 -6582798 - B1_Mus2 SINE Alu 0 147 2 6 1324 3148 274 88 72 chr15 96912176 96912509 -6582465 + Lx8 LINE L1 7116 7470 -3 6 1324 13626 66 10 0 chr15 96912536 96915037 -6579937 + L1Md_F LINE L1 450 2976 -2907 6 1324 5594 100 71 7 chr15 96915037 96915910 -6579064 + RMER17B LTR ERVK 30 958 0 6 1324 1254 242 113 18 chr15 96916002 96916092 -6578882 - RLTR20D LTR ERVK 0 505 414 6 1324 396 0 0 0 chr15 96916092 96916136 -6578838 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1324 2032 142 48 47 chr15 96916136 96916554 -6578420 - RLTR20D LTR ERVK -92 413 1 6 1324 746 143 8 0 chr15 96916709 96916842 -6578132 + CT-rich Low_complexity Low_complexity 1 134 0 6 1324 1336 66 50 0 chr15 96916910 96917091 -6577883 + B2_Mm2 SINE B2 2 191 -4 6 1324 289 193 7 29 chr15 96917150 96917289 -6577685 + (TG)n Simple_repeat Simple_repeat 2 137 0 6 1324 294 29 0 0 chr15 96917453 96917488 -6577486 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1324 328 346 25 6 chr15 96917675 96917835 -6577139 + L2 LINE L2 2235 2397 -1022 6 1324 934 76 30 0 chr15 96918291 96918423 -6576551 - B1_Mus2 SINE Alu -1 146 11 6 1324 295 205 34 57 chr15 96918344 96918432 -6576542 - 4.5SRNA scRNA scRNA -8 86 1 6 1324 1145 82 0 0 chr15 96919161 96919307 -6575667 + B1_Mus1 SINE Alu 1 146 -2 6 1324 247 365 14 0 chr15 96919709 96919783 -6575191 + ID4_ SINE ID 1 75 -8 6 1324 450 0 0 0 chr15 96919784 96919834 -6575140 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 6 1324 204 67 0 0 chr15 96920623 96920653 -6574321 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1324 908 163 48 0 chr15 96921180 96921346 -6573628 - B2_Mm2 SINE B2 -18 177 4 6 1324 6104 146 47 20 chr15 96921391 96922479 -6572495 - Lx4B LINE L1 -5 7053 5937 6 1324 1944 117 0 0 chr15 96922481 96922754 -6572220 + Lx4B LINE L1 5653 5925 -1133 6 1324 768 250 35 57 chr15 96923783 96924012 -6570962 + ORR1E LTR MaLR 15 238 -121 7 1324 427 221 0 0 chr15 96924076 96924162 -6570812 - MTEa LTR MaLR 0 379 294 7 1324 599 272 11 69 chr15 96924229 96924403 -6570571 + MTE-int LTR MaLR 19 182 -1398 7 1324 2257 142 19 31 chr15 96924403 96924816 -6570158 - L1_Mur3 LINE L1 -3029 2851 2444 7 1324 5019 148 65 13 chr15 96924816 96925662 -6569312 + RMER19B LTR ERVK 1 890 -12 7 1324 6406 151 36 8 chr15 96925677 96926037 -6568937 - L1_Mur3 LINE L1 -3431 2449 2083 7 1324 351 0 0 0 chr15 96926037 96926076 -6568898 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1324 6566 164 36 9 chr15 96926076 96928043 -6566931 - L1_Mur3 LINE L1 -3798 2082 56 7 1324 354 251 6 12 chr15 96928448 96928613 -6566361 + CT-rich Low_complexity Low_complexity 4 167 0 7 1324 258 340 30 55 chr15 96928633 96928798 -6566176 - LTR16B2 LTR ERVL -301 161 1 7 1324 285 182 0 0 chr15 96929076 96929131 -6565843 + GA-rich Low_complexity Low_complexity 3 57 0 7 1324 779 306 122 27 chr15 96929289 96929585 -6565389 + MTD LTR MaLR 11 334 -85 7 1324 340 164 32 16 chr15 96929660 96929722 -6565252 + MTD LTR MaLR 344 406 -15 7 1324 266 351 71 24 chr15 96930117 96930286 -6564688 + MIRb SINE MIR 92 268 0 7 1324 298 248 62 62 chr15 96930878 96931007 -6563967 + L1MD2 LINE L1 5204 5332 -814 7 1324 252 258 39 67 chr15 96931237 96931341 -6563633 - B4A SINE B4 -190 102 2 7 1324 255 340 65 42 chr15 96931348 96931563 -6563411 + L1MD2 LINE L1 5927 6146 -213 7 1324 207 0 0 0 chr15 96931642 96931665 -6563309 + (TTG)n Simple_repeat Simple_repeat 3 25 0 7 1324 190 271 127 14 chr15 96931788 96931859 -6563115 - MER5A DNA MER1_type -104 85 7 7 1324 225 241 21 94 chr15 96931982 96932078 -6562896 + ORR1D-int LTR MaLR 514 602 -768 7 1324 677 290 43 43 chr15 96933751 96933982 -6560992 + B4A SINE B4 2 232 -60 7 1324 378 0 0 0 chr15 96934056 96934098 -6560876 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1324 490 303 19 31 chr15 96934100 96934260 -6560714 + RSINE1 SINE B4 2 159 -6 7 1324 197 318 16 0 chr15 96934762 96934825 -6560149 - MIR SINE MIR -168 94 31 7 1324 391 322 98 85 chr15 96934879 96935103 -6559871 + B4 SINE B4 47 273 -19 7 1324 279 241 0 0 chr15 96935086 96935140 -6559834 + RSINE1 SINE B4 112 165 0 7 1324 2572 170 47 24 chr15 96935317 96935811 -6559163 + RLTR16 LTR ERVK 1 505 0 7 1324 506 287 38 13 chr15 96936106 96936265 -6558709 + B3 SINE B2 1 163 -53 7 1324 949 292 3 102 chr15 96936280 96936604 -6558370 + B4 SINE B4 1 292 0 7 1324 637 182 60 48 chr15 96937543 96937710 -6557264 - RMER1B Other Other -11 1055 887 7 1324 876 236 13 82 chr15 96937800 96938031 -6556943 + B3 SINE B2 1 215 -1 7 1324 23 0 0 0 chr15 96939384 96939407 -6555567 + AT_rich Low_complexity Low_complexity 1 23 0 7 1324 252 0 0 0 chr15 96939495 96939523 -6555451 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 1324 1048 314 65 24 chr15 96939529 96940190 -6554784 + L1MB8 LINE L1 5134 5832 -346 7 1324 335 267 9 28 chr15 96940233 96940341 -6554633 + L1MB8 LINE L1 6074 6179 -5 7 1324 226 67 44 0 chr15 96940549 96940594 -6554380 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 7 1324 195 69 0 0 chr15 96940717 96940746 -6554228 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 7 1324 22 0 0 0 chr15 96940934 96940956 -6554018 + AT_rich Low_complexity Low_complexity 1 22 0 7 1324 432 77 0 0 chr15 96941401 96941466 -6553508 + (CCA)n Simple_repeat Simple_repeat 2 66 0 7 1324 209 57 0 28 chr15 96941658 96941694 -6553280 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 7 1324 534 203 101 68 chr15 96942068 96942216 -6552758 - MLT1A1 LTR MaLR 0 408 256 7 1324 353 110 14 0 chr15 96942236 96942309 -6552665 + (GA)n Simple_repeat Simple_repeat 1 74 0 7 1324 279 133 0 0 chr15 96942695 96942740 -6552234 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 1324 201 167 20 20 chr15 96942812 96942844 -6552130 + polypyrimidine Low_complexity Low_complexity 20 50 0 7 1324 1219 61 0 0 chr15 96942844 96942992 -6551982 - B1_Mus1 SINE Alu 0 148 1 7 1324 201 167 20 20 chr15 96942992 96943008 -6551966 + polypyrimidine Low_complexity Low_complexity 3 19 0 7 1324 469 261 49 56 chr15 96943030 96943192 -6551782 - B4A SINE B4 -131 161 1 7 1324 471 78 0 0 chr15 96943773 96943837 -6551137 + (TTA)n Simple_repeat Simple_repeat 3 66 0 7 1324 906 155 119 31 chr15 96943838 96944031 -6550943 - L1_Mus4 LINE L1 -18 6618 6409 7 1324 241 242 45 0 chr15 96944594 96944660 -6550314 - MTE-int LTR MaLR -931 649 581 7 1324 4777 233 78 5 chr15 96944740 96945875 -6549099 - Lx7 LINE L1 -29 7667 6451 7 1324 1206 136 5 16 chr15 96945875 96946069 -6548905 - URR1A DNA MER1_type 0 226 35 7 1324 617 209 284 6 chr15 96946094 96946277 -6548697 - Lx7 LINE L1 -1227 6469 6236 7 1324 1951 229 48 78 chr15 96946271 96947025 -6547949 + Lx7 LINE L1 5520 6259 -1437 7 1324 466 143 0 0 chr15 96947022 96947092 -6547882 + Lx7 LINE L1 6893 6962 -734 7 1324 2970 188 51 157 chr15 96947087 96947555 -6547419 - L1_Mur3 LINE L1 -1243 4637 4181 7 1324 575 190 157 0 chr15 96947555 96947676 -6547298 + B1_Mur4 SINE Alu 2 141 -9 7 1324 423 0 0 0 chr15 96947681 96947728 -6547246 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 7 1324 2970 188 51 157 chr15 96947728 96947764 -6547210 - L1_Mur3 LINE L1 -1705 4175 4144 7 1324 732 52 0 0 chr15 96947764 96947861 -6547113 + (GGAA)n Simple_repeat Simple_repeat 4 100 0 7 1324 2970 189 50 147 chr15 96947861 96948305 -6546669 - L1_Mur3 LINE L1 -1737 4143 3702 7 1324 547 121 20 0 chr15 96948311 96948410 -6546564 + (TCC)n Simple_repeat Simple_repeat 3 103 0 7 1324 1412 188 31 10 chr15 96948410 96948701 -6546273 - L1_Mur3 LINE L1 -2874 3006 2710 7 1324 939 125 19 13 chr15 96948701 96948855 -6546119 + RMER6C LTR ERVK 535 689 -1 7 1324 354 228 0 0 chr15 96948857 96948936 -6546038 - L1_Mur3 LINE L1 -6807 921 843 7 1324 640 228 45 50 chr15 96949284 96949506 -6545468 - L1_Mur3 LINE L1 -6890 838 618 7 1324 501 62 0 0 chr15 96949770 96949835 -6545139 + (TC)n Simple_repeat Simple_repeat 2 66 0 7 1324 368 297 241 53 chr15 96949890 96950163 -6544811 + MLT1A0 LTR MaLR 10 365 0 7 1324 596 262 61 50 chr15 96950165 96950423 -6544551 + MLT1A0-int LTR MaLR 2 236 -1135 7 1324 313 278 33 42 chr15 96950424 96950445 -6544529 + CYRA11_Mm Unknown Y-chromosome 156 274 -343 7 1324 577 124 10 20 chr15 96950445 96950544 -6544430 - URR1B DNA MER1_type -4 221 124 7 1324 776 294 76 30 chr15 96950680 96950982 -6543992 + MLT1A0-int LTR MaLR 1397 1712 -23 7 1324 624 305 118 30 chr15 96950993 96951297 -6543677 + MLT1A0 LTR MaLR 26 356 -9 7 1324 594 120 167 0 chr15 96951317 96951425 -6543549 - B1_Mur3 SINE Alu -13 136 11 7 1324 258 105 0 0 chr15 96951495 96951533 -6543441 + (TCC)n Simple_repeat Simple_repeat 3 40 0 7 1324 903 225 102 123 chr15 96951722 96952103 -6542871 + RMER4B LTR ERVK 15 387 -198 7 1324 804 138 156 0 chr15 96952123 96952283 -6542691 + B2_Mm2 SINE B2 1 185 -10 7 1324 203 125 25 0 chr15 96952283 96952323 -6542651 + (TA)n Simple_repeat Simple_repeat 2 42 0 7 1324 194 298 35 0 chr15 96954188 96954245 -6540729 + L2a LINE L2 3355 3413 -13 7 1324 295 247 71 0 chr15 96954256 96954341 -6540633 - MER58B DNA MER1_type -180 161 71 7 1324 1198 103 32 11 chr15 96955276 96955463 -6539511 - B2_Mm2 SINE B2 -2 193 3 7 1324 1299 95 39 0 chr15 96955878 96956057 -6538917 + B2_Mm2 SINE B2 1 186 -9 7 1324 999 258 66 7 chr15 96956225 96956473 -6538501 - ORR1D2 LTR MaLR -80 314 37 7 1324 1755 211 59 31 chr15 96956473 96956962 -6538012 - RLTR16 LTR ERVK -2 503 1 7 1324 999 249 57 4 chr15 96956962 96956998 -6537976 - ORR1D2 LTR MaLR -332 38 2 7 1324 1316 105 11 0 chr15 96957076 96957267 -6537707 + B2_Mm1a SINE B2 1 193 0 7 1324 347 260 95 9 chr15 96957758 96957863 -6537111 + PB1D10 SINE Alu 4 117 0 7 1324 1021 211 19 14 chr15 96958345 96958556 -6536418 + B3 SINE B2 1 212 -4 7 1324 681 237 45 0 chr15 96959216 96959393 -6535581 + RMER15 LTR ERVL 377 561 -14 7 1324 291 307 19 68 chr15 96959614 96959775 -6535199 + L1MC4a LINE L1 7729 7881 -1 7 1324 462 320 20 89 chr15 96960216 96960463 -6534511 + L1MCa LINE L1 729 958 -5550 7 1324 635 256 11 90 chr15 96960498 96960687 -6534287 + B3A SINE B2 9 182 -16 7 1324 420 180 36 0 chr15 96960710 96960877 -6534097 + (CAGA)n Simple_repeat Simple_repeat 2 174 0 7 1324 255 268 66 96 chr15 96960908 96961044 -6533930 + YREP_Mm Unknown Unknown 163 294 -1518 7 1324 894 187 7 0 chr15 96960926 96961065 -6533909 - B1_Mur4 SINE Alu -8 142 3 7 1324 396 380 37 32 chr15 96961129 96961477 -6533497 + Lx8 LINE L1 7049 7398 -75 7 1324 690 177 58 16 chr15 96961640 96961819 -6533155 - B3 SINE B2 -10 185 8 7 1324 2752 162 39 26 chr15 96961903 96962410 -6532564 - RLTR31A_Mm LTR ERVK -70 514 1 7 1324 595 265 105 17 chr15 96962883 96963121 -6531853 + L1MCa LINE L1 1488 1746 -4762 7 1324 1177 22 0 0 chr15 96963122 96963257 -6531717 + B1_Mus2 SINE Alu 2 136 -11 7 1324 909 28 0 0 chr15 96963257 96963365 -6531609 + (GAA)n Simple_repeat Simple_repeat 1 108 0 7 1324 1396 82 5 11 chr15 96963368 96963553 -6531421 + B2_Mm1t SINE B2 1 184 -9 7 1324 789 216 0 0 chr15 96963575 96963714 -6531260 + B1_Mur2 SINE Alu 3 141 -8 7 1324 428 130 26 0 chr15 96963717 96963794 -6531180 + GA-rich Low_complexity Low_complexity 2 80 0 7 1324 306 306 75 19 chr15 96963884 96964044 -6530930 + L1MCa LINE L1 2552 2720 -3601 7 1324 445 383 54 17 chr15 96964092 96964445 -6530529 - L1M2a LINE L1 -6498 670 305 7 1324 394 252 89 8 chr15 96964472 96964596 -6530378 - L1M2a LINE L1 -7033 135 2 7 1324 984 289 133 29 chr15 96964680 96965447 -6529527 + L1MC1 LINE L1 5487 6333 0 7 1324 387 0 0 0 chr15 96966679 96966722 -6528252 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 1324 721 289 69 52 chr15 96966766 96967209 -6527765 - RLTR15 LTR ERVK -195 333 1 7 1324 655 252 0 0 chr15 96967369 96967504 -6527470 + B1F SINE Alu 9 143 -6 7 1324 3380 124 138 8 chr15 96967894 96968505 -6526469 - RMER6C LTR ERVK 0 690 1 7 1324 1933 141 73 75 chr15 96968613 96968998 -6525976 - ORR1C2 LTR MaLR 0 384 1 7 1324 272 212 45 0 chr15 96969261 96969327 -6525647 + CT-rich Low_complexity Low_complexity 4 72 0 7 1324 194 81 0 26 chr15 96969338 96969376 -6525598 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 7 1324 414 253 91 74 chr15 96969445 96969688 -6525286 - L1MCa LINE L1 -1903 4418 4172 7 1324 202 250 33 16 chr15 96969832 96969893 -6525081 + (CACCC)n Simple_repeat Simple_repeat 5 66 0 7 1324 271 148 16 0 chr15 96970208 96970269 -6524705 - L1MCa LINE L1 -4296 2212 2151 7 1324 2020 156 23 23 chr15 96970379 96970733 -6524241 - ORR1B1 LTR MaLR 0 394 41 7 1324 408 166 195 54 chr15 96970743 96970928 -6524046 - L1MCa LINE L1 -4478 2030 1820 7 1324 341 267 138 48 chr15 96970986 96971175 -6523799 - L1MCa LINE L1 -4571 1937 1732 7 1324 890 230 14 23 chr15 96971217 96971431 -6523543 - ID_B1 SINE B4 -12 212 1 7 1324 436 353 52 76 chr15 96971433 96971853 -6523121 - L1MCa LINE L1 -4778 1730 1321 7 1324 428 314 61 4 chr15 96971936 96972198 -6522776 - L1MCa LINE L1 -5204 1304 1028 7 1324 450 209 12 12 chr15 96972203 96972363 -6522611 + CT-rich Low_complexity Low_complexity 1 160 0 7 1324 1648 280 90 112 chr15 96972399 96973444 -6521530 - L1MCa LINE L1 -5486 1022 1 7 1324 278 132 19 0 chr15 96973511 96973564 -6521410 + (TG)n Simple_repeat Simple_repeat 2 55 0 8 1324 394 385 52 24 chr15 96973879 96974129 -6520845 + L1ME4a LINE L1 5602 5858 -266 8 1324 471 267 73 33 chr15 96974250 96974401 -6520573 + B4A SINE B4 10 166 -126 8 1324 494 103 11 0 chr15 96975424 96975511 -6519463 + (TC)n Simple_repeat Simple_repeat 2 89 0 8 1324 315 303 26 35 chr15 96975804 96975879 -6519095 - L1MEg LINE L1 -4132 1952 1877 8 1324 921 32 195 0 chr15 96975879 96976002 -6518972 - B1_Mus2 SINE Alu 0 147 1 8 1324 315 303 26 35 chr15 96976002 96976039 -6518935 - L1MEg LINE L1 -4208 1876 1841 8 1324 195 42 0 0 chr15 96976151 96976175 -6518799 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 1324 1426 80 16 5 chr15 96976343 96976531 -6518443 + B2_Mm2 SINE B2 1 190 -5 8 1324 207 0 0 0 chr15 96976827 96976850 -6518124 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 8 1324 2238 158 83 0 chr15 96976852 96977237 -6517737 - RMER1B Other Other -27 1039 623 8 1324 515 141 85 1 chr15 96977237 96977351 -6517623 + B1_Mur2 SINE Alu 21 144 -5 8 1324 405 0 0 0 chr15 96977777 96977822 -6517152 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1324 687 284 38 11 chr15 96978014 96978199 -6516775 - B3A SINE B2 -7 191 2 8 1324 243 286 12 23 chr15 96978241 96978327 -6516647 + LTR16B2 LTR ERVL 287 371 -91 8 1324 1950 133 59 78 chr15 96978394 96978642 -6516332 + ORR1B2 LTR MaLR 1 248 -119 8 1324 2213 212 32 88 chr15 96978642 96979289 -6515685 - RMER19C LTR ERVK 0 611 1 8 1324 1950 133 59 78 chr15 96979289 96979414 -6515560 + ORR1B2 LTR MaLR 249 367 0 8 1324 198 0 0 0 chr15 96979875 96979897 -6515077 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1324 1313 14 0 0 chr15 96979897 96980044 -6514930 - B1_Mus2 SINE Alu 0 147 1 8 1324 449 62 0 15 chr15 96980152 96980218 -6514756 + (TG)n Simple_repeat Simple_repeat 1 65 0 8 1324 461 301 96 52 chr15 96980234 96980504 -6514470 - B4A SINE B4 -10 282 1 8 1324 1024 265 142 12 chr15 96980803 96981128 -6513846 - ORR1D2 LTR MaLR -3 367 1 8 1324 197 67 47 62 chr15 96981291 96981330 -6513644 + A-rich Low_complexity Low_complexity 4 38 0 8 1324 1215 35 7 0 chr15 96981330 96981475 -6513499 + B1_Mus1 SINE Alu 3 148 0 8 1324 197 67 47 62 chr15 96981475 96981499 -6513475 + A-rich Low_complexity Low_complexity 39 64 0 8 1324 1059 211 14 9 chr15 96981529 96981744 -6513230 - B3 SINE B2 0 216 1 8 1324 675 391 67 26 chr15 96984054 96984622 -6510352 - MLT-int LTR MaLR -1140 595 5 8 1324 1251 129 114 0 chr15 96985555 96985757 -6509217 + URR1B DNA MER1_type 1 225 0 8 1324 25 0 0 0 chr15 96985925 96985950 -6509024 + AT_rich Low_complexity Low_complexity 1 25 0 8 1324 398 275 52 37 chr15 96986032 96986168 -6508806 - B1F1 SINE Alu -10 139 2 8 1324 2820 6 0 0 chr15 96987112 96987423 -6507551 - L1Md_A LINE L1 0 6582 6272 8 1324 1523 58 5 0 chr15 96987434 96987624 -6507350 - B2_Mm1a SINE B2 -2 191 1 8 1324 237 279 16 0 chr15 96987826 96987887 -6507087 - MLT1L LTR MaLR -221 389 328 8 1324 181 140 23 23 chr15 96988080 96988124 -6506850 + GA-rich Low_complexity Low_complexity 1 44 0 8 1324 539 172 30 0 chr15 96988741 96988875 -6506099 + CT-rich Low_complexity Low_complexity 1 138 0 8 1324 242 238 88 0 chr15 96990025 96990105 -6504869 + B4A SINE B4 157 243 -49 8 1324 448 211 115 3 chr15 96990092 96990216 -6504758 + B1_Mur1 SINE Alu 5 138 -11 8 1324 243 0 0 0 chr15 96990216 96990243 -6504731 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 1324 246 128 0 0 chr15 96990314 96990353 -6504621 + (CATG)n Simple_repeat Simple_repeat 3 41 0 8 1324 2911 165 23 4 chr15 96990695 96991207 -6503767 + RLTR11A LTR ERVK 1 522 -6 8 1324 29 0 0 0 chr15 96991363 96991392 -6503582 + AT_rich Low_complexity Low_complexity 1 29 0 8 1324 332 214 122 37 chr15 96992192 96992299 -6502675 + MTD LTR MaLR 4 119 -300 8 1324 250 302 47 0 chr15 96992316 96992402 -6502572 + MTE2b LTR MaLR 48 137 -242 8 1324 186 103 0 0 chr15 96992463 96992492 -6502482 + (TGG)n Simple_repeat Simple_repeat 1 29 0 8 1324 590 264 95 6 chr15 96992496 96992664 -6502310 + MT2A LTR ERVL 346 528 -5 8 1324 207 209 0 0 chr15 96993095 96993138 -6501836 + T-rich Low_complexity Low_complexity 1 43 0 8 1325 238 211 17 17 chr15 96993341 96993399 -6501575 + (CA)n Simple_repeat Simple_repeat 1 58 0 8 1325 378 0 0 0 chr15 96993402 96993444 -6501530 + (GA)n Simple_repeat Simple_repeat 1 42 0 8 1325 390 233 56 0 chr15 96993454 96993544 -6501430 + PB1D10 SINE Alu 14 108 -9 8 1325 239 250 15 59 chr15 96993610 96993678 -6501296 + MLT1A0 LTR MaLR 172 236 -129 8 1325 82 21 0 0 chr15 96994330 96994426 -6500548 + AT_rich Low_complexity Low_complexity 1 96 0 8 1325 396 174 20 61 chr15 96995812 96995910 -6499064 - PB1D10 SINE Alu 0 117 24 8 1325 1163 63 0 0 chr15 96996150 96996292 -6498682 - B1_Mus1 SINE Alu -6 142 1 8 1325 608 251 43 11 chr15 96996478 96996655 -6498319 - B3A SINE B2 -6 189 1 8 1325 2449 160 136 17 chr15 96997267 96997789 -6497185 - RLTR31A_Mm LTR ERVK 0 584 1 8 1325 185 318 30 0 chr15 96998170 96998236 -6496738 - L2 LINE L2 -640 2779 2712 8 1325 210 339 0 0 chr15 96998492 96998554 -6496420 + G-rich Low_complexity Low_complexity 4 65 0 8 1325 292 230 0 119 chr15 96998907 96998991 -6495983 + B3A SINE B2 1 74 -124 8 1325 776 101 9 0 chr15 97001117 97001226 -6493748 + RMER10A LTR ERVL 1 110 -332 1 1325 820 236 97 0 chr15 97001315 97001510 -6493464 - B3 SINE B2 0 216 3 2 1325 1427 226 80 20 chr15 97002247 97002664 -6492310 + RLTR20A LTR ERVK 36 468 -109 3 1325 198 0 0 0 chr15 97002664 97002686 -6492288 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 1325 1427 252 89 35 chr15 97002686 97002769 -6492205 + RLTR20A LTR ERVK 444 544 -7 3 1325 1423 153 135 55 chr15 97003074 97003385 -6491589 + RLTR12B LTR ERVK 1 336 -192 5 1325 381 258 60 22 chr15 97004401 97004583 -6490391 - L1_Mur3 LINE L1 -605 5566 5341 6 1325 333 0 0 0 chr15 97004681 97004718 -6490256 + (TA)n Simple_repeat Simple_repeat 1 37 0 7 1325 817 188 27 0 chr15 97004922 97005071 -6489903 - URR1A DNA MER1_type -73 153 1 8 1325 333 155 0 56 chr15 97005325 97005414 -6489560 + G-rich Low_complexity Low_complexity 2 85 0 9 1325 991 201 32 46 chr15 97007608 97007827 -6487147 - B3 SINE B2 0 216 1 1 1325 465 218 0 0 chr15 97009193 97009358 -6485616 + (CA)n Simple_repeat Simple_repeat 2 166 0 1 1325 501 213 0 0 chr15 97009426 97009595 -6485379 + (CA)n Simple_repeat Simple_repeat 2 170 0 1 1325 1529 246 46 104 chr15 97009850 97010159 -6484815 + RMER5 LTR ERV1 1 267 -267 1 1325 774 190 198 16 chr15 97010159 97010341 -6484633 + B3 SINE B2 2 216 0 1 1325 192 40 0 0 chr15 97010345 97010370 -6484604 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 1 1325 1529 246 46 104 chr15 97010370 97010622 -6484352 + RMER5 LTR ERV1 268 526 -8 1 1325 708 313 15 68 chr15 97011353 97011617 -6483357 - B4A SINE B4 -2 290 41 1 1325 405 0 0 0 chr15 97011724 97011769 -6483205 + (T)n Simple_repeat Simple_repeat 1 45 0 1 1325 392 318 99 86 chr15 97012484 97012869 -6482105 + MLT1B LTR MaLR 1 390 0 1 1325 417 297 0 26 chr15 97013604 97013718 -6481256 + PB1D10 SINE Alu 1 111 -6 1 1325 898 260 4 35 chr15 97013779 97013942 -6481032 - URR1A DNA MER1_type -1 225 67 2 1325 885 92 36 58 chr15 97013942 97014081 -6480893 + B1_Mus1 SINE Alu 2 137 -11 2 1325 898 260 4 35 chr15 97014081 97014148 -6480826 - URR1A DNA MER1_type -160 66 2 2 1325 756 207 0 7 chr15 97015000 97015136 -6479838 - B1_Mur2 SINE Alu -13 136 2 2 1325 3020 26 6 0 chr15 97015167 97015511 -6479463 - ORR1A0 LTR MaLR 0 346 1 2 1325 408 236 234 6 chr15 97015978 97016136 -6478838 + B3A SINE B2 5 198 0 2 1325 1201 205 140 12 chr15 97016138 97016255 -6478719 - RMER16 LTR ERVK 0 533 414 2 1325 251 28 0 27 chr15 97016255 97016292 -6478682 + (TTTTA)n Simple_repeat Simple_repeat 4 39 0 2 1325 1201 179 100 47 chr15 97016292 97016545 -6478429 - RMER16 LTR ERVK -120 413 1 2 1325 281 271 72 90 chr15 97016766 97017064 -6477910 - MLT1J2 LTR MaLR -41 407 75 2 1325 441 0 0 0 chr15 97018001 97018050 -6476924 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1325 580 270 7 21 chr15 97018052 97018192 -6476782 - RSINE1 SINE B4 -26 139 2 2 1325 22 0 0 0 chr15 97018339 97018361 -6476613 + AT_rich Low_complexity Low_complexity 1 22 0 3 1325 210 105 0 0 chr15 97018494 97018532 -6476442 + (T)n Simple_repeat Simple_repeat 1 38 0 3 1325 225 236 62 111 chr15 97019095 97019176 -6475798 + MER54B LTR ERVL 143 219 -574 3 1325 238 132 14 68 chr15 97020450 97020523 -6474451 + A-rich Low_complexity Low_complexity 1 69 0 3 1325 423 38 0 0 chr15 97021656 97021709 -6473265 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1325 183 156 0 0 chr15 97022186 97022218 -6472756 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 3 1325 836 86 0 49 chr15 97022462 97022585 -6472389 + B1_Mur3 SINE Alu 25 141 -8 3 1325 321 26 0 0 chr15 97022585 97022623 -6472351 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3 1325 231 227 75 15 chr15 97022624 97022691 -6472283 - ORR1D2 LTR MaLR -98 272 202 3 1325 232 362 9 54 chr15 97023028 97023139 -6471835 + RMER12 LTR ERVK 746 851 -471 3 1325 420 20 0 0 chr15 97023186 97023235 -6471739 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1325 998 254 46 35 chr15 97023344 97023405 -6471569 - B4A SINE B4 -2 290 237 4 1325 684 286 22 22 chr15 97023405 97023584 -6471390 - B3A SINE B2 -17 181 3 4 1325 998 254 46 35 chr15 97023584 97023807 -6471167 - B4A SINE B4 -56 236 4 4 1325 237 280 13 0 chr15 97023857 97023932 -6471042 + L1MA5 LINE L1 5533 5608 -683 4 1325 1667 297 65 9 chr15 97024036 97024671 -6470303 + L1MA5 LINE L1 5621 6290 -10 4 1325 364 250 12 24 chr15 97024804 97024886 -6470088 - ID4 SINE ID 0 83 3 4 1325 254 299 189 53 chr15 97025107 97025351 -6469623 + MER110A LTR ERV1 144 420 -48 4 1325 237 127 76 0 chr15 97025596 97025675 -6469299 + (TA)n Simple_repeat Simple_repeat 1 85 0 4 1325 214 38 75 19 chr15 97025740 97025793 -6469181 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1325 2087 83 110 16 chr15 97025805 97026123 -6468851 - Lx LINE L1 0 6654 6307 4 1325 245 286 111 14 chr15 97027049 97027133 -6467841 + LTR85a LTR Gypsy? 573 651 -51 4 1325 199 340 87 10 chr15 97028069 97028173 -6466801 - L2c LINE L2 -4 3383 3272 5 1325 741 220 12 36 chr15 97028644 97028809 -6466165 + B2_Mm2 SINE B2 4 164 -31 5 1325 184 333 163 24 chr15 97029344 97029510 -6465464 - MIR SINE MIR -34 228 40 5 1325 914 226 20 0 chr15 97029955 97030150 -6464824 + B3 SINE B2 1 199 -17 5 1325 238 87 21 21 chr15 97030165 97030212 -6464762 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 5 1325 27 62 0 0 chr15 97031274 97031322 -6463652 + AT_rich Low_complexity Low_complexity 1 48 0 5 1325 566 325 84 59 chr15 97031337 97031657 -6463317 + L1M5 LINE L1 3775 4102 -2044 5 1325 317 156 13 0 chr15 97031700 97031777 -6463197 + (CATA)n Simple_repeat Simple_repeat 3 80 0 5 1325 597 172 59 25 chr15 97031791 97031910 -6463064 + B1_Mur4 SINE Alu 27 149 -1 5 1325 464 259 107 0 chr15 97031957 97032088 -6462886 + B1_Mur1 SINE Alu 3 147 -2 5 1325 200 132 26 0 chr15 97032088 97032126 -6462848 + (TA)n Simple_repeat Simple_repeat 2 40 0 6 1325 348 268 65 7 chr15 97032129 97032283 -6462691 + L1M5 LINE L1 4122 4284 -1862 5 1325 558 188 0 56 chr15 97032296 97032383 -6462591 + B3 SINE B2 116 200 -16 6 1325 1700 205 85 5 chr15 97032383 97032771 -6462203 - MTD LTR MaLR 0 419 1 6 1325 558 188 0 56 chr15 97032771 97032790 -6462184 + B3 SINE B2 201 216 0 6 1325 311 309 164 73 chr15 97032793 97032936 -6462038 + L1M5 LINE L1 4419 4556 -1590 5 1325 649 155 61 18 chr15 97032936 97033100 -6461874 - Lx2B LINE L1 0 7000 6830 6 1325 311 309 164 73 chr15 97033100 97033378 -6461596 + L1M5 LINE L1 4557 4878 -1268 5 1325 233 250 0 0 chr15 97033381 97033437 -6461537 + ID4_ SINE ID 19 74 -9 6 1325 736 251 39 17 chr15 97033396 97033523 -6461451 + B3 SINE B2 35 162 -54 6 1325 297 0 0 0 chr15 97033523 97033556 -6461418 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1325 736 251 39 17 chr15 97033556 97033606 -6461368 + B3 SINE B2 163 215 -1 6 1325 1283 92 48 11 chr15 97033675 97033862 -6461112 + B2_Mm2 SINE B2 1 194 -1 6 1325 291 220 17 34 chr15 97034117 97034298 -6460676 + GA-rich Low_complexity Low_complexity 1 177 0 6 1325 22 56 0 0 chr15 97034581 97034617 -6460357 + AT_rich Low_complexity Low_complexity 1 36 0 6 1325 268 192 41 0 chr15 97034621 97034694 -6460280 + (CATA)n Simple_repeat Simple_repeat 3 78 0 7 1325 508 330 76 12 chr15 97034694 97034889 -6460085 - B3A SINE B2 -13 203 2 7 1325 465 152 0 214 chr15 97035335 97035494 -6459480 + PB1 SINE Alu 1 125 -2 7 1325 216 0 0 0 chr15 97035569 97035593 -6459381 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 7 1325 249 148 22 22 chr15 97037391 97037452 -6457522 + L1MC LINE L1 5439 5502 -738 7 1325 480 72 0 0 chr15 97037929 97037998 -6456976 - B1_Mus1 SINE Alu -79 69 1 7 1325 464 300 0 32 chr15 97038158 97038313 -6456661 - B4A SINE B4 -4 288 139 7 1325 243 333 12 0 chr15 97038455 97038539 -6456435 + (TG)n Simple_repeat Simple_repeat 1 85 0 7 1325 274 259 89 57 chr15 97039060 97039183 -6455791 - MER77 LTR ERVL -417 190 64 7 1325 301 284 153 6 chr15 97039258 97039421 -6455553 - L1M5 LINE L1 -2416 3730 3544 7 1325 234 254 18 0 chr15 97039735 97039790 -6455184 + (TG)n Simple_repeat Simple_repeat 1 56 0 8 1325 3646 65 9 4 chr15 97039850 97040311 -6454663 - L1Md_F2 LINE L1 -19 6563 6101 8 1325 715 168 67 0 chr15 97040389 97040508 -6454466 - B4A SINE B4 -58 234 108 8 1325 270 197 73 29 chr15 97040448 97040516 -6454458 - PB1D7 SINE Alu -38 82 12 8 1325 605 206 34 54 chr15 97040521 97040670 -6454304 + B2_Mm2 SINE B2 29 174 -21 8 1325 245 186 43 0 chr15 97040673 97040743 -6454231 + (TA)n Simple_repeat Simple_repeat 1 73 0 8 1325 247 192 39 0 chr15 97040772 97040824 -6454150 - B4 SINE B4 -237 55 2 8 1325 552 234 145 0 chr15 97041241 97041365 -6453609 + ID_B1 SINE B4 82 223 -1 8 1325 420 256 83 49 chr15 97041546 97041690 -6453284 - B1F1 SINE Alu 0 149 1 8 1325 221 233 61 91 chr15 97041870 97041936 -6453038 + PB1D10 SINE Alu 49 112 -5 8 1325 275 217 0 0 chr15 97041894 97041940 -6453034 + ID_B1 SINE B4 178 223 -1 8 1325 1055 88 75 0 chr15 97041961 97042108 -6452866 + B2_Mm1t SINE B2 3 160 -33 9 1325 219 36 0 0 chr15 97042108 97042136 -6452838 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 9 1325 371 165 321 27 chr15 97042205 97042317 -6452657 + B2_Mm2 SINE B2 47 191 -4 9 1325 239 300 41 91 chr15 97042477 97042598 -6452376 - L2 LINE L2 -521 2898 2784 9 1325 588 261 108 99 chr15 97042696 97043019 -6451955 - MER44A DNA MER2_type -9 330 5 9 1325 384 22 0 0 chr15 97043223 97043268 -6451706 + (CCCCCA)n Simple_repeat Simple_repeat 3 47 0 9 1325 25 51 0 0 chr15 97044292 97044331 -6450643 + AT_rich Low_complexity Low_complexity 1 39 0 9 1325 3369 50 2 2 chr15 97044336 97044734 -6450240 - MTB LTR MaLR 0 400 3 9 1325 797 254 48 0 chr15 97044736 97044925 -6450049 - B3 SINE B2 -18 198 1 9 1325 362 284 39 189 chr15 97045231 97045299 -6449675 - MLT1C LTR MaLR 0 467 409 9 1325 441 196 89 119 chr15 97045299 97045467 -6449507 + RSINE1 SINE B4 3 165 0 1 1325 362 284 39 189 chr15 97045467 97045684 -6449290 - MLT1C LTR MaLR -59 408 225 9 1325 1251 48 0 0 chr15 97045865 97046012 -6448962 + B1_Mus2 SINE Alu 1 147 0 1 1325 1245 54 0 0 chr15 97046383 97046530 -6448444 - B1_Mus2 SINE Alu 0 147 1 1 1325 414 0 0 0 chr15 97046739 97046785 -6448189 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 1325 2163 149 117 0 chr15 97046942 97047317 -6447657 + MTC LTR MaLR 1 419 -2 1 1325 2060 158 136 158 chr15 97047387 97048012 -6446962 + RMER19C LTR ERVK 1 611 0 1 1325 297 0 0 0 chr15 97048080 97048113 -6446861 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1325 279 0 0 0 chr15 97048114 97048145 -6446829 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 1 1325 752 194 21 7 chr15 97048462 97048607 -6446367 - B1_Mur3 SINE Alu 0 149 3 1 1325 218 197 113 16 chr15 97048723 97048785 -6446189 + ID SINE ID 18 85 -139 1 1325 238 218 60 11 chr15 97048740 97048808 -6446166 + ID4 SINE ID 36 104 -48 1 1325 362 349 102 37 chr15 97048798 97049042 -6445932 - MLT1A1 LTR MaLR -55 353 94 1 1325 1591 135 88 20 chr15 97049377 97049672 -6445302 + ORR1B2 LTR MaLR 53 367 0 1 1325 479 287 144 32 chr15 97049870 97050099 -6444875 - ORR1E LTR MaLR -2 377 100 1 1325 360 64 0 0 chr15 97050099 97050146 -6444828 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1325 479 315 79 57 chr15 97050146 97050240 -6444734 - ORR1E LTR MaLR -260 99 2 1 1325 306 0 0 0 chr15 97050453 97050487 -6444487 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1325 765 298 106 61 chr15 97050843 97051336 -6443638 + LTR40a LTR ERVL 1 515 -4 1 1325 205 307 30 0 chr15 97051879 97051980 -6442994 + (CA)n Simple_repeat Simple_repeat 1 104 0 1 1325 2888 141 138 43 chr15 97052919 97053549 -6441425 + RMER6C LTR ERVK 1 690 0 1 1325 1111 127 185 0 chr15 97053619 97053808 -6441166 - URR1B DNA MER1_type -1 224 1 1 1325 1716 220 85 5 chr15 97055419 97055807 -6439167 + MTD LTR MaLR 1 419 0 1 1325 200 382 38 19 chr15 97056200 97056360 -6438614 + L2 LINE L2 2683 2845 -574 1 1325 569 228 48 8 chr15 97056535 97056659 -6438315 - B1F SINE Alu -1 148 20 1 1325 1420 233 114 12 chr15 97057051 97057481 -6437493 - Lx9 LINE L1 -7 7637 7164 1 1325 296 148 16 0 chr15 97057851 97057912 -6437062 + CT-rich Low_complexity Low_complexity 2 63 0 1 1325 354 159 79 0 chr15 97057962 97058025 -6436949 - MER57A-int LTR ERV1 -294 5893 5826 1 1325 185 132 0 26 chr15 97058277 97058316 -6436658 + A-rich Low_complexity Low_complexity 3 40 0 1 1325 555 194 338 0 chr15 97058320 97058480 -6436494 + B3 SINE B2 2 215 -1 1 1325 2475 62 6 58 chr15 97058813 97059158 -6435816 + ORR1A2 LTR MaLR 1 327 0 1 1325 231 276 217 18 chr15 97059408 97059562 -6435412 + MIR SINE MIR 25 195 -73 1 1325 1666 157 54 66 chr15 97060890 97061225 -6433749 + ORR1B2 LTR MaLR 1 331 -36 1 1325 3014 128 69 14 chr15 97061226 97061731 -6433243 + RMER19A LTR ERVK 1 533 -204 1 1325 225 208 167 0 chr15 97061698 97061746 -6433228 + RMER19A LTR ERVK 403 458 -153 1 1325 2403 93 12 3 chr15 97062565 97062889 -6432085 - ORR1A2 LTR MaLR 0 327 1 1 1325 1564 125 152 0 chr15 97063175 97063431 -6431543 - RMER6D LTR ERVK -425 295 1 1 1325 1197 74 0 0 chr15 97063431 97063579 -6431395 + B1_Mus1 SINE Alu 1 148 0 1 1325 282 160 0 0 chr15 97064655 97064705 -6430269 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1325 1317 71 5 16 chr15 97065372 97065558 -6429416 - B2_Mm2 SINE B2 -11 184 1 1 1325 554 125 57 0 chr15 97065902 97065990 -6428984 + URR1A DNA MER1_type 73 165 -61 1 1325 898 136 256 0 chr15 97065993 97066169 -6428805 + RMER19B LTR ERVK 1 221 -681 1 1325 2407 139 123 22 chr15 97066197 97066661 -6428313 + RMER19B LTR ERVK 392 902 0 1 1325 333 131 65 16 chr15 97066661 97066723 -6428251 + URR1A DNA MER1_type 161 225 -1 1 1325 921 133 164 36 chr15 97067141 97067336 -6427638 - URR1A DNA MER1_type -6 220 1 1 1325 779 212 168 40 chr15 97067560 97067786 -6427188 + MTD LTR MaLR 153 407 -12 1 1325 23 0 0 0 chr15 97068022 97068045 -6426929 + AT_rich Low_complexity Low_complexity 1 23 0 1 1325 848 192 73 34 chr15 97068348 97068526 -6426448 + ORR1D1 LTR MaLR 2 186 -188 1 1325 320 232 10 0 chr15 97068537 97068636 -6426338 + CT-rich Low_complexity Low_complexity 1 100 0 1 1325 422 238 155 22 chr15 97068637 97068798 -6426176 + ORR1D1 LTR MaLR 205 374 0 1 1325 1283 28 0 0 chr15 97068872 97069016 -6425958 + B1_Mus2 SINE Alu 4 147 0 1 1325 21 0 0 0 chr15 97069030 97069051 -6425923 + AT_rich Low_complexity Low_complexity 1 21 0 1 1325 433 267 111 70 chr15 97069155 97069425 -6425549 - B4A SINE B4 -10 282 2 1 1325 706 271 228 6 chr15 97069863 97070205 -6424769 + MTD LTR MaLR 1 418 -1 1 1325 360 0 0 0 chr15 97071436 97071476 -6423498 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1325 213 39 0 0 chr15 97071476 97071501 -6423473 + (CG)n Simple_repeat Simple_repeat 2 27 0 1 1325 254 350 0 0 chr15 97071544 97071641 -6423333 + (TG)n Simple_repeat Simple_repeat 2 98 0 1 1325 260 279 6 0 chr15 97071665 97071826 -6423148 + (TG)n Simple_repeat Simple_repeat 1 162 0 1 1325 444 312 7 0 chr15 97071838 97071992 -6422982 + (TG)n Simple_repeat Simple_repeat 2 156 0 1 1325 274 262 156 90 chr15 97072027 97072283 -6422691 - B4A SINE B4 -18 274 2 1 1325 572 250 17 0 chr15 97072393 97072513 -6422461 + B3A SINE B2 2 123 -75 1 1325 189 0 0 0 chr15 97072527 97072548 -6422426 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 1325 963 73 36 12 chr15 97072548 97072714 -6422260 + (GGAGA)n Simple_repeat Simple_repeat 3 173 0 1 1325 26 104 0 0 chr15 97077609 97077705 -6417269 + GC_rich Low_complexity Low_complexity 1 96 0 1 1325 30 103 0 0 chr15 97077893 97078000 -6416974 + GC_rich Low_complexity Low_complexity 1 107 0 1 1325 192 111 0 0 chr15 97078343 97078379 -6416595 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1325 307 240 51 20 chr15 97079594 97079692 -6415282 - MLT1A1 LTR MaLR -4 370 270 1 1325 341 252 39 155 chr15 97079865 97080020 -6414954 - MLT1A1 LTR MaLR -271 137 1 1 1325 264 331 71 14 chr15 97080218 97080359 -6414615 + MLT1K LTR MaLR 438 586 -9 1 1325 1117 266 176 9 chr15 97080960 97081267 -6413707 - MT2A LTR ERVL -16 517 137 1 1325 240 35 0 0 chr15 97081267 97081296 -6413678 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 1 1325 1117 266 176 9 chr15 97081296 97081431 -6413543 - MT2A LTR ERVL -397 136 1 1 1325 399 113 0 0 chr15 97081562 97081624 -6413350 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 1325 377 216 196 9 chr15 97083017 97083129 -6411845 + ORR1E LTR MaLR 11 143 -216 1 1325 287 341 23 23 chr15 97083123 97083252 -6411722 + ORR1E LTR MaLR 246 374 -5 1 1325 21 0 0 0 chr15 97083895 97083916 -6411058 + AT_rich Low_complexity Low_complexity 1 21 0 1 1325 604 166 68 54 chr15 97083945 97084092 -6410882 - B1F1 SINE Alu 0 149 1 1 1325 2020 269 133 26 chr15 97084240 97084900 -6410074 + RCHARR1 DNA MER1_type 5 735 -239 1 1325 678 214 16 54 chr15 97084936 97085142 -6409832 - B3A SINE B2 -15 201 2 1 1325 672 236 70 61 chr15 97085145 97085375 -6409599 + RCHARR1 DNA MER1_type 743 974 0 1 1325 260 211 0 13 chr15 97086267 97086344 -6408630 + CT-rich Low_complexity Low_complexity 2 77 0 1 1325 601 172 17 7 chr15 97086394 97086686 -6408288 + CT-rich Low_complexity Low_complexity 1 295 0 1 1325 339 269 0 13 chr15 97086695 97086774 -6408200 - PB1D10 SINE Alu -23 94 17 1 1325 640 303 48 33 chr15 97086878 97087148 -6407826 + B4A SINE B4 1 274 -18 1 1325 470 315 8 30 chr15 97088289 97088423 -6406551 + ID_B1 SINE B4 86 216 -8 1 1325 202 250 13 147 chr15 97088793 97088868 -6406106 + L2c LINE L2 3314 3378 -9 1 1325 213 39 0 0 chr15 97089185 97089211 -6405763 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1325 587 236 109 60 chr15 97089677 97089925 -6405049 - RMER2 LTR ERV1 0 567 308 1 1325 414 0 0 0 chr15 97090352 97090398 -6404576 + (TGG)n Simple_repeat Simple_repeat 2 47 0 1 1325 234 0 0 0 chr15 97090402 97090428 -6404546 + (TTGG)n Simple_repeat Simple_repeat 1 26 0 1 1325 600 247 143 0 chr15 97090431 97090613 -6404361 - ID_B1 SINE B4 -16 208 1 1 1325 341 213 27 0 chr15 97091191 97091266 -6403708 - L1MEg LINE L1 -364 5809 5733 1 1325 537 271 4 0 chr15 97091266 97091542 -6403432 + (TG)n Simple_repeat Simple_repeat 1 277 0 1 1325 817 325 29 0 chr15 97091555 97091835 -6403139 - B4A SINE B4 -2 290 3 1 1325 338 263 0 0 chr15 97091909 97091985 -6402989 - ID_B1 SINE B4 -1 223 148 1 1325 308 311 24 18 chr15 97092024 97092188 -6402786 - L1MEg LINE L1 -520 5653 5489 1 1325 331 262 0 23 chr15 97092253 97092339 -6402635 - L1MEg LINE L1 -967 5179 5096 1 1325 2316 172 103 14 chr15 97092404 97092889 -6402085 - RLTR11A LTR ERVK 0 528 1 1 1325 284 292 87 61 chr15 97093563 97093840 -6401134 - L1MEg LINE L1 -2387 3759 3476 1 1325 492 302 33 7 chr15 97093868 97094018 -6400956 - RSINE1 SINE B4 -9 156 3 1 1325 281 233 146 7 chr15 97094047 97094198 -6400776 - L1MEg LINE L1 -2686 3460 3289 1 1325 657 38 0 0 chr15 97094227 97094307 -6400667 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 1325 1018 232 5 0 chr15 97094308 97094506 -6400468 - Lx5 LINE L1 -180 6870 6672 1 1325 1920 192 97 15 chr15 97094518 97094930 -6400044 - MT2A LTR ERVL -77 456 11 1 1325 1457 63 16 11 chr15 97094930 97095121 -6399853 + B2_Mm2 SINE B2 1 192 -3 1 1325 383 187 128 18 chr15 97095150 97095259 -6399715 - MERVL_2A-int LTR ERVL -33 5728 5608 1 1325 228 300 105 35 chr15 97095542 97095770 -6399204 - L1MEg LINE L1 -3355 2791 2548 1 1325 405 349 83 24 chr15 97095978 97096266 -6398708 - L1MEg LINE L1 -3928 2238 1934 1 1325 430 226 52 7 chr15 97096268 97096408 -6398566 - MLT1A LTR MaLR 0 390 245 1 1325 1498 137 31 174 chr15 97096436 97096557 -6398417 - Lx LINE L1 0 6654 6538 1 1325 180 0 0 0 chr15 97096557 97096577 -6398397 + (CCCCCA)n Simple_repeat Simple_repeat 5 24 0 1 1325 1498 137 31 174 chr15 97096577 97096845 -6398129 - Lx LINE L1 -117 6537 6321 1 1325 1018 241 77 98 chr15 97096862 97097239 -6397735 - MTE2a LTR MaLR 0 379 11 1 1325 292 350 0 10 chr15 97097247 97097345 -6397629 - MLT1A LTR MaLR -268 97 1 1 1325 661 286 152 41 chr15 97097433 97097893 -6397081 - L1MEg LINE L1 -4432 1810 1300 1 1325 190 325 94 0 chr15 97098215 97098332 -6396642 - L3 LINE CR1 -548 3941 3814 1 1325 1085 63 56 3 chr15 97098372 97098657 -6396317 + (TG)n Simple_repeat Simple_repeat 1 299 0 1 1325 281 324 64 37 chr15 97098667 97098776 -6396198 - RSINE1 SINE B4 0 165 54 1 1325 384 103 0 0 chr15 97098825 97098883 -6396091 + (TCCC)n Simple_repeat Simple_repeat 2 59 0 1 1325 549 283 0 62 chr15 97098948 97099140 -6395834 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1325 771 169 113 11 chr15 97099195 97099380 -6395594 - B3 SINE B2 -12 204 1 1 1325 231 262 43 120 chr15 97099529 97099646 -6395328 - LTR86A1 LTR ERVL -399 114 7 1 1325 21 82 0 0 chr15 97099839 97099888 -6395086 + AT_rich Low_complexity Low_complexity 1 49 0 1 1325 307 281 12 12 chr15 97100099 97100182 -6394792 + ID4 SINE ID 1 83 0 2 1325 385 280 157 13 chr15 97100350 97100509 -6394465 + B3A SINE B2 7 188 -10 2 1325 1672 205 80 31 chr15 97100657 97101044 -6393930 - MTD LTR MaLR 0 419 14 2 1325 194 354 164 33 chr15 97101070 97101283 -6393691 - MIRc SINE MIR -26 242 2 2 1325 342 0 0 0 chr15 97101947 97101985 -6392989 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1325 696 24 0 0 chr15 97103245 97103327 -6391647 + (GGGA)n Simple_repeat Simple_repeat 3 84 0 2 1325 496 286 71 52 chr15 97103713 97103868 -6391106 + RSINE1 SINE B4 8 165 0 2 1325 745 159 8 0 chr15 97104164 97104424 -6390550 + (TCCA)n Simple_repeat Simple_repeat 1 262 0 2 1325 276 100 0 0 chr15 97104425 97104465 -6390509 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 2 1325 1149 147 0 3 chr15 97104462 97104809 -6390165 + (TCCA)n Simple_repeat Simple_repeat 1 345 0 2 1325 261 0 0 0 chr15 97105550 97105579 -6389395 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1325 292 232 72 0 chr15 97106191 97106260 -6388714 - MADE2 DNA Mariner 0 80 7 2 1325 330 26 0 0 chr15 97106897 97106936 -6388038 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1325 403 301 85 81 chr15 97107924 97108195 -6386779 - ORR1E LTR MaLR -5 354 83 2 1325 1244 153 5 28 chr15 97108182 97108397 -6386577 + URR1A DNA MER1_type 17 226 0 2 1325 2131 84 78 3 chr15 97108467 97108800 -6386174 - ORR1A3 LTR MaLR -8 386 1 2 1325 344 311 72 13 chr15 97110822 97110975 -6383999 + ORR1E LTR MaLR 28 189 -170 2 1325 253 304 63 0 chr15 97111032 97111111 -6383863 + ORR1E LTR MaLR 283 366 -13 2 1325 233 168 105 94 chr15 97112244 97112415 -6382559 + (CAGTA)n Simple_repeat Simple_repeat 5 177 0 2 1325 690 232 19 6 chr15 97112731 97112887 -6382087 - ID_B1 SINE B4 -66 158 1 2 1325 1366 244 60 0 chr15 97113855 97114171 -6380803 - MTE2b LTR MaLR -44 335 1 2 1325 432 261 92 37 chr15 97114605 97114768 -6380206 + MIRb SINE MIR 92 263 -5 2 1325 258 32 0 0 chr15 97115337 97115368 -6379606 + (TTAG)n Simple_repeat Simple_repeat 3 33 0 2 1325 183 156 0 0 chr15 97115408 97115440 -6379534 + (CACG)n Simple_repeat Simple_repeat 4 35 0 2 1325 580 243 6 103 chr15 97116516 97116672 -6378302 + RSINE1 SINE B4 4 144 -21 2 1325 272 285 35 109 chr15 97116672 97116717 -6378257 + B2_Mm2 SINE B2 3 188 -7 2 1325 619 194 267 12 chr15 97116723 97116895 -6378079 + B3 SINE B2 1 216 0 2 1325 1937 87 134 10 chr15 97117824 97118114 -6376860 - ORR1A3 LTR MaLR 0 326 1 2 1325 270 143 0 0 chr15 97118142 97118184 -6376790 - ID_B1 SINE B4 -9 215 174 2 1325 270 236 42 61 chr15 97118184 97118240 -6376734 - PB1D10 SINE Alu -1 115 25 2 1325 379 209 25 92 chr15 97118244 97118407 -6376567 - L1MB3 LINE L1 -86 6097 5946 2 1325 248 70 0 23 chr15 97118469 97118513 -6376461 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 2 1325 2507 78 15 3 chr15 97118513 97118849 -6376125 - L1_Mus3 LINE L1 -33 6605 6266 2 1325 371 250 31 42 chr15 97119042 97119138 -6375836 + PB1D10 SINE Alu 23 117 0 2 1325 214 128 0 49 chr15 97119140 97119181 -6375793 + (GGGTG)n Simple_repeat Simple_repeat 3 41 0 2 1325 1833 223 20 24 chr15 97119868 97119884 -6375090 - MTD LTR MaLR -12 407 394 2 1325 2917 57 29 51 chr15 97119884 97120293 -6374681 - MTB LTR MaLR 0 400 1 2 1325 1833 223 20 24 chr15 97120293 97120685 -6374289 - MTD LTR MaLR -26 393 1 2 1325 190 317 0 0 chr15 97121996 97122037 -6372937 - MIRc SINE MIR -197 71 31 2 1325 2359 65 3 124 chr15 97122561 97122933 -6372041 - ORR1A2 LTR MaLR 0 327 1 2 1325 990 120 7 0 chr15 97123934 97124076 -6370898 + B1_Mus1 SINE Alu 5 147 -1 2 1325 218 136 23 0 chr15 97124093 97124137 -6370837 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 2 165 734 276 72 19 chr15 97124180 97124387 -6370587 - ID_B1 SINE B4 -1 223 6 2 1326 438 235 36 89 chr15 97125019 97125033 -6369941 - PB1D7 SINE Alu -3 117 107 2 1326 192 40 0 0 chr15 97125033 97125058 -6369916 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 1326 438 235 36 89 chr15 97125058 97125155 -6369819 - PB1D7 SINE Alu -14 106 12 2 1326 203 88 29 0 chr15 97125191 97125225 -6369749 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1326 210 322 35 14 chr15 97125226 97125371 -6369603 + (TATG)n Simple_repeat Simple_repeat 4 151 0 2 1326 870 300 45 31 chr15 97125391 97125422 -6369552 - B4A SINE B4 -2 290 264 2 1326 186 118 0 0 chr15 97125422 97125456 -6369518 + (TATG)n Simple_repeat Simple_repeat 1 34 0 2 1326 870 300 45 31 chr15 97125456 97125710 -6369264 - B4A SINE B4 -29 263 1 2 1326 436 181 24 12 chr15 97126645 97126729 -6368245 + PB1D10 SINE Alu 33 117 0 2 1326 184 224 83 33 chr15 97126778 97126838 -6368136 - L3 LINE CR1 -2260 2229 2167 2 1326 557 28 14 0 chr15 97126908 97126979 -6367995 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 1326 1328 192 82 7 chr15 97127101 97127394 -6367580 - Lx7 LINE L1 0 7696 7382 2 1326 325 255 110 20 chr15 97127412 97127512 -6367462 - RMER12 LTR ERVK -471 851 743 2 1326 1230 28 0 0 chr15 97127596 97127741 -6367233 + B1_Mus2 SINE Alu 2 146 -1 2 1326 934 230 34 13 chr15 97127757 97127995 -6366979 - Lx7 LINE L1 -437 7259 7017 2 1326 14558 139 75 15 chr15 97127994 97128451 -6366523 - L1_Mur3 LINE L1 -1662 4218 3744 2 1326 243 0 0 0 chr15 97128451 97128478 -6366496 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1326 14558 139 75 15 chr15 97128478 97128916 -6366058 - L1_Mur3 LINE L1 -2137 3743 3260 2 1326 585 28 0 0 chr15 97128916 97128987 -6365987 + (TC)n Simple_repeat Simple_repeat 2 72 0 2 1326 14558 149 68 22 chr15 97128987 97131985 -6362989 - L1_Mur3 LINE L1 -2621 3259 130 2 1326 449 312 126 78 chr15 97131996 97132409 -6362565 - L1M4 LINE L1 -1462 4684 4252 2 1326 818 58 0 0 chr15 97132437 97132540 -6362434 - B1_Mm SINE Alu -43 104 2 2 1326 34 55 0 0 chr15 97132661 97132716 -6362258 + AT_rich Low_complexity Low_complexity 1 55 0 2 1326 305 177 0 12 chr15 97132789 97132869 -6362105 + CT-rich Low_complexity Low_complexity 2 80 0 2 1326 31 0 0 0 chr15 97133508 97133539 -6361435 + AT_rich Low_complexity Low_complexity 1 31 0 2 1326 369 366 15 19 chr15 97133553 97133759 -6361215 - L1M4 LINE L1 -2014 4132 3928 2 1326 258 236 258 23 chr15 97133836 97134053 -6360921 - L1M4 LINE L1 -2405 3735 3468 2 1326 352 314 139 23 chr15 97134069 97134457 -6360517 - L1M4 LINE L1 -3149 2997 2565 2 1326 566 12 0 46 chr15 97134939 97135026 -6359948 + (GGGTG)n Simple_repeat Simple_repeat 3 85 0 2 1326 2443 149 7 26 chr15 97135510 97135938 -6359036 - MTC LTR MaLR 0 421 2 2 1326 270 286 13 0 chr15 97136223 97136300 -6358674 + ID4 SINE ID 2 79 -4 2 1326 886 223 56 0 chr15 97136621 97136818 -6358156 + B3 SINE B2 1 208 -8 2 1326 505 217 11 17 chr15 97137973 97138151 -6356823 + CT-rich Low_complexity Low_complexity 3 179 0 2 1326 310 262 190 27 chr15 97138176 97138360 -6356614 - L1M5 LINE L1 -651 5473 5260 2 1326 204 360 77 50 chr15 97138899 97139080 -6355894 + MIRc SINE MIR 34 219 -49 2 1326 1158 61 0 7 chr15 97139446 97139595 -6355379 + B1_Mus1 SINE Alu 1 148 0 2 1326 277 159 32 0 chr15 97139597 97139660 -6355314 + GA-rich Low_complexity Low_complexity 2 66 0 2 1326 955 253 46 39 chr15 97139666 97139946 -6355028 + B4A SINE B4 11 292 0 2 1326 530 200 19 4 chr15 97139962 97140229 -6354745 + (CA)n Simple_repeat Simple_repeat 1 271 0 2 1326 453 230 11 6 chr15 97140255 97140434 -6354540 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1326 732 23 0 0 chr15 97141242 97141328 -6353646 + (GGGAA)n Simple_repeat Simple_repeat 4 89 0 2 1326 987 164 179 5 chr15 97142297 97142487 -6352487 - URR1B DNA MER1_type -2 223 1 2 1326 520 284 14 21 chr15 97142605 97142749 -6352225 + B1_Mur2 SINE Alu 2 144 -5 2 1326 225 307 41 33 chr15 97142936 97143062 -6351912 + PB1D10 SINE Alu 10 136 -13 2 1326 300 304 78 2 chr15 97143136 97143319 -6351655 + L1M3 LINE L1 5090 5292 -851 2 1326 831 292 78 38 chr15 97143336 97143706 -6351268 - MER77 LTR ERVL -2 605 221 2 1326 290 295 26 0 chr15 97143803 97143881 -6351093 - MER77 LTR ERVL -506 101 22 2 1326 660 102 0 0 chr15 97144179 97144267 -6350707 - B2_Mm2 SINE B2 -106 89 2 2 1326 293 263 30 59 chr15 97144267 97144350 -6350624 - MLT1L LTR MaLR -317 293 214 2 1326 1220 41 7 0 chr15 97144375 97144521 -6350453 + B1_Mus1 SINE Alu 2 148 0 2 1326 181 53 79 0 chr15 97144521 97144559 -6350415 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 2 1326 203 243 0 0 chr15 97145500 97145537 -6349437 + polypyrimidine Low_complexity Low_complexity 5 41 0 2 1326 302 298 24 12 chr15 97146957 97147042 -6347932 + LTR40a LTR ERVL 1 86 -433 2 1326 390 312 42 7 chr15 97148082 97148224 -6346750 - MER104 DNA Tc2 -33 148 2 2 1326 1028 205 259 14 chr15 97148225 97148522 -6346452 - ORR1D2 LTR MaLR 0 370 1 2 1326 181 0 0 65 chr15 97148546 97148577 -6346397 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 2 1326 183 284 164 19 chr15 97148651 97148755 -6346219 - MIRb SINE MIR -9 259 141 2 1326 187 301 200 29 chr15 97149723 97149863 -6345111 + MIRb SINE MIR 82 245 -23 2 1326 184 293 37 85 chr15 97149892 97149974 -6345000 + L2c LINE L2 3291 3368 -19 2 1326 1017 82 55 0 chr15 97150232 97150378 -6344596 - B2_Mm2 SINE B2 -2 193 40 2 1326 231 312 0 0 chr15 97150417 97150481 -6344493 - L1_Mur2 LINE L1 -261 5922 5859 2 1326 684 337 48 36 chr15 97150492 97151071 -6343903 - L1_Mur2 LINE L1 -1676 4467 3856 2 1326 261 0 0 0 chr15 97151071 97151100 -6343874 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2 1326 684 341 67 46 chr15 97151100 97151258 -6343716 - L1_Mur2 LINE L1 -2256 3887 3696 2 1326 540 314 55 38 chr15 97151288 97151523 -6343451 - MTEb LTR MaLR -135 244 6 2 1326 471 328 12 116 chr15 97151529 97151623 -6343351 - L1_Mur2 LINE L1 -3052 3091 2999 2 1326 1177 68 0 0 chr15 97151623 97151769 -6343205 - B1_Mus2 SINE Alu 0 147 2 2 1326 471 328 12 116 chr15 97151769 97151912 -6343062 - L1_Mur2 LINE L1 -3145 2998 2866 2 1326 1389 79 0 36 chr15 97151912 97152108 -6342866 + B2_Mm2 SINE B2 2 190 -5 2 1326 471 328 12 116 chr15 97152108 97152214 -6342760 - L1_Mur2 LINE L1 -3278 2865 2783 2 1326 577 272 128 0 chr15 97152224 97152404 -6342570 + ID_B1 SINE B4 1 203 -21 2 1326 243 306 0 62 chr15 97152487 97152616 -6342358 - L1_Mur2 LINE L1 -3496 2647 2527 2 1326 229 220 0 0 chr15 97152915 97152965 -6342009 - L1MEf LINE L1 -3999 2201 2152 2 1326 249 83 0 0 chr15 97153131 97153167 -6341807 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1326 180 0 0 0 chr15 97153651 97153671 -6341303 + (GA)n Simple_repeat Simple_repeat 2 21 0 2 1326 320 219 0 59 chr15 97156076 97156144 -6338830 + tRNA-Ala-GCY_ tRNA tRNA 4 67 -8 3 1326 2890 99 12 15 chr15 97156167 97156575 -6338399 - MTB_Mm LTR MaLR 0 407 1 3 1326 732 129 16 31 chr15 97156781 97156909 -6338065 + B1_Mur3 SINE Alu 23 148 -1 3 1326 470 77 0 10 chr15 97156962 97157073 -6337901 + B2_Mm2 SINE B2 47 192 -3 3 1326 1249 96 11 11 chr15 97157158 97157348 -6337626 - B2_Mm1t SINE B2 0 193 4 3 1326 502 309 37 11 chr15 97157621 97157811 -6337163 - RMER5 LTR ERV1 0 534 340 3 1326 274 258 124 0 chr15 97157871 97157968 -6337006 - RMER5 LTR ERV1 -333 201 93 3 1326 388 201 68 40 chr15 97158021 97158205 -6336769 - B3A SINE B2 -6 210 8 3 1326 275 47 0 65 chr15 97158373 97158397 -6336577 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1326 1222 41 7 0 chr15 97158397 97158542 -6336432 - B1_Mus2 SINE Alu 0 147 2 3 1326 275 47 0 65 chr15 97158542 97158563 -6336411 + (T)n Simple_repeat Simple_repeat 1 19 0 3 1326 631 212 75 178 chr15 97158705 97158946 -6336028 - B3 SINE B2 0 216 1 3 1326 397 312 74 53 chr15 97159155 97159399 -6335575 - MER34 LTR ERV1 -3 539 291 3 1326 232 224 0 59 chr15 97159487 97159765 -6335209 + (CACCC)n Simple_repeat Simple_repeat 1 261 0 3 1326 274 244 176 80 chr15 97160129 97160179 -6334795 - B1F1 SINE Alu -8 141 89 3 1326 1381 73 15 35 chr15 97160179 97160377 -6334597 - B2_Mm2 SINE B2 0 195 2 3 1326 274 244 176 80 chr15 97160377 97160451 -6334523 - B1F1 SINE Alu -61 88 5 3 1326 626 247 69 6 chr15 97160964 97161139 -6333835 + B3A SINE B2 1 186 -12 3 1326 297 75 0 0 chr15 97161330 97161370 -6333604 + (CATA)n Simple_repeat Simple_repeat 4 43 0 3 1326 274 283 9 26 chr15 97161443 97161559 -6333415 + (TATG)n Simple_repeat Simple_repeat 2 115 0 3 1326 809 330 7 28 chr15 97161571 97161855 -6333119 - B4A SINE B4 -13 279 2 3 1326 491 276 62 23 chr15 97161876 97162006 -6332968 + ID_B1 SINE B4 74 208 -16 3 1326 408 55 0 0 chr15 97162042 97162097 -6332877 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1326 1886 146 153 52 chr15 97162890 97163295 -6331679 - RLTR41 LTR ERV1 0 446 1 3 1326 1056 62 0 0 chr15 97163392 97163521 -6331453 + B1_Mus2 SINE Alu 1 129 -18 3 1326 405 0 0 0 chr15 97163521 97163566 -6331408 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1326 225 0 0 0 chr15 97163658 97163683 -6331291 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 1326 231 261 193 0 chr15 97163886 97163974 -6331000 + MER21B LTR ERV1 71 175 -688 3 1326 556 175 19 10 chr15 97164098 97164202 -6330772 - MTD LTR MaLR -21 398 294 3 1326 576 152 11 0 chr15 97164205 97164297 -6330677 - MTD LTR MaLR -324 95 3 3 1326 347 362 21 14 chr15 97164302 97164439 -6330535 + MER21B LTR ERV1 342 479 -384 3 1326 521 137 56 13 chr15 97164439 97164587 -6330387 + B3 SINE B2 3 175 -18 3 1326 3219 39 13 3 chr15 97164587 97164972 -6330002 + L1_Mus1 LINE L1 6179 6567 0 3 1326 393 211 179 42 chr15 97164972 97164991 -6329983 + B2_Mm1t SINE B2 176 192 -1 3 1326 243 61 0 0 chr15 97165547 97165580 -6329394 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 3 1326 2836 56 6 0 chr15 97166477 97166835 -6328139 + MTB LTR MaLR 41 400 0 3 1326 995 111 0 22 chr15 97167414 97167598 -6327376 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1326 2371 157 36 18 chr15 97167680 97168177 -6326797 - Lx4A LINE L1 0 7000 6517 3 1326 1824 152 37 56 chr15 97168185 97168595 -6326379 - RMER17C LTR ERVK -8 402 1 3 1326 588 102 11 0 chr15 97168600 97168688 -6326286 - Lx4A LINE L1 -542 6516 6428 3 1326 201 279 0 32 chr15 97169277 97169340 -6325634 + GA-rich Low_complexity Low_complexity 2 62 0 3 1326 2118 142 192 7 chr15 97169355 97169772 -6325202 - RLTR28 LTR ERVL -30 494 1 3 1326 301 286 88 98 chr15 97169772 97169964 -6325010 - MTEa LTR MaLR -171 208 19 3 1326 300 27 0 0 chr15 97170146 97170183 -6324791 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1326 535 234 28 0 chr15 97170317 97170424 -6324550 - B1_Mur1 SINE Alu 0 149 40 3 1326 214 274 0 0 chr15 97170427 97170489 -6324485 + CT-rich Low_complexity Low_complexity 2 63 0 3 1326 298 211 35 0 chr15 97170494 97170551 -6324423 - PB1D9 SINE Alu -61 59 1 3 1326 249 244 97 32 chr15 97170608 97170701 -6324273 - MIR SINE MIR -163 99 1 3 1326 838 278 75 109 chr15 97171167 97171542 -6323432 + MTC LTR MaLR 40 401 -20 3 1326 1259 54 0 0 chr15 97171756 97171904 -6323070 + B1_Mus1 SINE Alu 1 148 0 3 1326 369 62 0 0 chr15 97171904 97171952 -6323022 + (A)n Simple_repeat Simple_repeat 1 48 0 3 1326 269 286 35 113 chr15 97172239 97172311 -6322663 + RSINE1 SINE B4 2 69 -96 3 1326 2349 71 55 6 chr15 97172311 97172623 -6322351 - ORR1A2 LTR MaLR 0 327 1 3 1326 269 286 35 113 chr15 97172623 97172692 -6322282 + RSINE1 SINE B4 70 131 -34 3 1326 340 295 21 0 chr15 97173275 97173365 -6321609 + PB1D10 SINE Alu 6 97 -20 3 1326 854 249 24 60 chr15 97173365 97173646 -6321328 + MTD LTR MaLR 1 270 -130 3 1326 21 0 0 0 chr15 97173789 97173810 -6321164 + GC_rich Low_complexity Low_complexity 1 21 0 3 1326 222 62 0 0 chr15 97173881 97173913 -6321061 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1326 450 0 0 0 chr15 97173913 97173962 -6321012 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 1326 245 125 38 94 chr15 97173967 97174020 -6320954 - PB1D10 SINE Alu -29 88 39 3 1326 385 240 0 51 chr15 97174144 97174223 -6320751 - PB1D7 SINE Alu -16 104 30 3 1326 419 272 88 7 chr15 97174640 97174777 -6320197 - B3 SINE B2 -68 148 1 3 1326 682 179 108 20 chr15 97175539 97175628 -6319346 - RLTR16 LTR ERVK -1 504 401 3 1326 456 19 0 0 chr15 97175628 97175681 -6319293 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1326 682 215 55 72 chr15 97175681 97175807 -6319167 - RLTR16 LTR ERVK -105 400 210 3 1326 1115 66 7 0 chr15 97175807 97175944 -6319030 + B1_Mus1 SINE Alu 2 139 -9 3 1326 243 0 0 0 chr15 97175944 97175971 -6319003 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1326 511 239 39 71 chr15 97176006 97176252 -6318722 - LTRIS_Mm LTR ERV1 0 482 244 3 1326 198 0 0 0 chr15 97176374 97176396 -6318578 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 3 1326 689 178 89 35 chr15 97176399 97176568 -6318406 - RLTR16 LTR ERVK -327 178 1 3 1326 392 325 68 77 chr15 97176881 97177014 -6317960 + ID_B1 SINE B4 7 145 -79 3 1326 1172 103 97 0 chr15 97177014 97177189 -6317785 + B2_Mm2 SINE B2 2 193 -2 3 1326 622 37 0 35 chr15 97177190 97177275 -6317699 + B1_Mur4 SINE Alu 69 150 0 3 1326 387 0 0 0 chr15 97178664 97178707 -6316267 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1326 216 0 0 0 chr15 97178707 97178730 -6316244 + (GA)n Simple_repeat Simple_repeat 1 24 0 3 1326 783 199 27 14 chr15 97178736 97178884 -6316090 - B3A SINE B2 -47 151 2 3 1326 198 366 29 19 chr15 97179346 97179449 -6315525 - MIRb SINE MIR -31 237 134 3 1326 329 333 94 53 chr15 97179740 97179911 -6315063 - MIRb SINE MIR -45 223 46 3 1326 1387 84 21 5 chr15 97180130 97180322 -6314652 - B2_Mm2 SINE B2 0 195 1 3 1326 2265 97 15 6 chr15 97180327 97180658 -6314316 - L1_Mus3 LINE L1 -3 6635 6302 3 1326 244 291 139 0 chr15 97181106 97181192 -6313782 + PB1D10 SINE Alu 1 98 -19 3 1326 349 243 0 0 chr15 97181208 97181278 -6313696 + ID4_ SINE ID 1 70 -13 3 1326 239 240 0 20 chr15 97181961 97181979 -6312995 + polypurine Low_complexity Low_complexity 1 18 0 3 1326 575 51 0 12 chr15 97181979 97182059 -6312915 + (GGGGA)n Simple_repeat Simple_repeat 1 79 0 3 1326 239 240 0 20 chr15 97182059 97182091 -6312883 + polypurine Low_complexity Low_complexity 19 50 0 3 1326 315 343 102 48 chr15 97182092 97182279 -6312695 + HAL1-3A_ME LINE L1 2284 2480 -378 3 1326 622 236 8 0 chr15 97182516 97182639 -6312335 - ID_B1 SINE B4 0 224 101 3 1326 240 143 0 0 chr15 97182647 97182689 -6312285 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1326 1153 36 50 0 chr15 97182791 97182931 -6312043 - B1_Mm SINE Alu 0 147 1 3 1326 790 203 128 5 chr15 97183289 97183477 -6311497 + B3 SINE B2 1 211 -5 3 1326 1044 147 15 40 chr15 97183850 97184049 -6310925 - B2_Mm2 SINE B2 0 195 2 3 1326 260 309 151 0 chr15 97184053 97184192 -6310782 + MIR SINE MIR 103 262 0 3 1326 258 188 0 0 chr15 97184204 97184219 -6310755 + A-rich Low_complexity Low_complexity 1 15 0 3 1326 1183 54 0 39 chr15 97184219 97184372 -6310602 + B1_Mm SINE Alu 1 147 0 3 1326 258 188 0 0 chr15 97184372 97184420 -6310554 + A-rich Low_complexity Low_complexity 16 63 0 3 1326 755 322 94 37 chr15 97184701 97185265 -6309709 + L1MC LINE L1 3258 3853 -2293 3 1326 1483 63 5 35 chr15 97185336 97185534 -6309440 + B2_Mm1t SINE B2 2 193 0 3 1326 1232 43 0 0 chr15 97185577 97185717 -6309257 + B1_Mus2 SINE Alu 2 141 -6 3 1326 364 250 107 0 chr15 97185744 97185828 -6309146 + ID_B1 SINE B4 120 212 -12 3 1326 326 266 25 0 chr15 97185826 97185905 -6309069 - ID SINE ID -136 88 8 3 1326 662 279 53 6 chr15 97185913 97186194 -6308780 + L1MC2 LINE L1 5315 5628 -2157 3 1326 657 53 274 0 chr15 97186352 97186465 -6308509 + B1_Mus1 SINE Alu 5 148 0 3 1326 907 104 0 49 chr15 97186474 97186616 -6308358 + URR1A DNA MER1_type 90 224 -2 3 1326 258 164 18 18 chr15 97186626 97186682 -6308292 + L1MC2 LINE L1 6118 6173 -171 3 1326 259 265 53 105 chr15 97186854 97186921 -6308053 - B1F1 SINE Alu 0 149 91 3 1326 925 274 0 0 chr15 97186921 97187136 -6307838 - B3 SINE B2 -1 215 1 3 1326 259 265 53 105 chr15 97187136 97187182 -6307792 - B1F1 SINE Alu -59 90 42 3 1326 763 185 11 11 chr15 97187859 97188039 -6306935 + (CATA)n Simple_repeat Simple_repeat 1 180 0 3 1326 586 211 11 0 chr15 97188044 97188219 -6306755 + (CA)n Simple_repeat Simple_repeat 2 178 0 3 1326 1351 79 22 0 chr15 97188662 97188840 -6306134 + B2_Mm2 SINE B2 1 182 -13 3 1326 230 192 86 0 chr15 97188872 97188929 -6306045 + PB1 SINE Alu 55 125 -2 3 1326 415 277 110 80 chr15 97188946 97189146 -6305828 + ID_B1 SINE B4 9 214 -10 4 1326 1200 62 7 0 chr15 97189179 97189325 -6305649 - B1_Mus2 SINE Alu 0 147 1 4 1326 236 203 31 15 chr15 97189569 97189609 -6305365 + polypurine Low_complexity Low_complexity 2 41 0 4 1326 360 0 0 0 chr15 97189609 97189649 -6305325 + (GGAAA)n Simple_repeat Simple_repeat 4 43 0 4 1326 236 203 31 15 chr15 97189649 97189673 -6305301 + polypurine Low_complexity Low_complexity 42 66 0 4 1326 243 0 0 0 chr15 97189673 97189700 -6305274 + (CAGGG)n Simple_repeat Simple_repeat 2 28 0 4 1326 460 136 224 120 chr15 97189854 97189979 -6304995 + B1_Mus1 SINE Alu 2 139 -9 4 1326 961 80 31 0 chr15 97190012 97190174 -6304800 + (TAGA)n Simple_repeat Simple_repeat 3 169 0 4 1326 256 173 158 13 chr15 97190288 97190364 -6304610 + ID_B1 SINE B4 125 211 -13 4 1326 303 242 118 29 chr15 97190389 97190491 -6304483 - PB1D10 SINE Alu -2 115 5 4 1326 465 240 20 10 chr15 97190518 97190619 -6304355 + RSINE1 SINE B4 2 103 -62 4 1326 929 272 5 0 chr15 97190664 97190848 -6304126 - B3 SINE B2 -11 205 21 4 1326 668 199 69 0 chr15 97190861 97190992 -6303982 + B1_Mur1 SINE Alu 3 142 -7 4 1326 955 26 0 0 chr15 97193158 97193273 -6301701 + B1_Mus1 SINE Alu 31 145 -3 4 1326 183 42 0 0 chr15 97193273 97193297 -6301677 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4 1326 994 142 0 20 chr15 97193381 97193532 -6301442 - B1_Mus1 SINE Alu 0 148 1 4 1326 520 243 61 54 chr15 97193658 97193806 -6301168 - B1_Mur1 SINE Alu 0 149 1 4 1326 477 51 0 0 chr15 97194285 97194344 -6300630 - ORR1A2 LTR MaLR 0 326 268 4 1326 441 36 0 0 chr15 97194344 97194399 -6300575 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1326 643 123 184 0 chr15 97194399 97194513 -6300461 - B2_Mm2 SINE B2 -46 149 15 4 1326 1226 48 7 0 chr15 97194542 97194688 -6300286 + B1_Mus2 SINE Alu 1 147 0 4 1326 2004 89 4 4 chr15 97194716 97194986 -6299988 - ORR1A2 LTR MaLR -57 270 1 4 1326 1235 109 0 47 chr15 97195204 97195397 -6299577 - B2_Mm2 SINE B2 -10 185 2 4 1326 1588 48 0 0 chr15 97196021 97196208 -6298766 - B2_Mm1t SINE B2 -6 187 1 4 1326 393 330 9 9 chr15 97196254 97196370 -6298604 - PB1D10 SINE Alu -1 116 1 4 1326 432 104 0 0 chr15 97196427 97196494 -6298480 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 1326 436 235 154 49 chr15 97196494 97196626 -6298348 - B3A SINE B2 -45 153 5 4 1326 2073 201 62 83 chr15 97196632 97196691 -6298283 - RLTR20C LTR ERVK -14 520 445 4 1326 302 0 26 0 chr15 97196691 97196729 -6298245 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1326 2073 201 62 83 chr15 97196729 97197200 -6297774 - RLTR20C LTR ERVK -90 444 1 4 1326 521 226 0 20 chr15 97197228 97197352 -6297622 - PB1D7 SINE Alu 0 120 1 4 1326 331 208 153 0 chr15 97197371 97197443 -6297531 - ID4_ SINE ID 0 83 1 4 1326 1385 74 21 0 chr15 97197457 97197646 -6297328 - B2_Mm1t SINE B2 0 193 1 4 1326 336 111 0 0 chr15 97197685 97197748 -6297226 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1326 445 231 0 0 chr15 97197762 97197853 -6297121 - B1F SINE Alu -39 110 20 4 1326 180 0 0 0 chr15 97198285 97198305 -6296669 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1326 737 290 11 3 chr15 97198472 97198674 -6296300 + B3A SINE B2 4 209 -7 4 1326 385 113 294 49 chr15 97198699 97198801 -6296173 + B1_Mur1 SINE Alu 22 148 -1 4 1326 407 175 0 0 chr15 97198803 97198866 -6296108 + B1_Mus2 SINE Alu 2 64 -83 4 1326 270 0 0 0 chr15 97198890 97198920 -6296054 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1326 287 117 0 155 chr15 97198993 97199064 -6295910 + 4.5SRNA scRNA scRNA 30 89 -5 4 1326 565 131 0 12 chr15 97199015 97199100 -6295874 + B1_Mur1 SINE Alu 46 129 -20 4 1326 251 356 0 0 chr15 97199114 97199187 -6295787 + L2 LINE L2 1221 1293 -2126 4 1326 250 277 87 19 chr15 97199235 97199338 -6295636 + L2 LINE L2 1680 1789 -1630 4 1326 203 250 0 20 chr15 97199346 97199395 -6295579 + G-rich Low_complexity Low_complexity 6 53 0 4 1326 425 19 0 18 chr15 97199397 97199452 -6295522 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 1326 228 277 70 133 chr15 97199548 97199706 -6295268 - MIRb SINE MIR -108 160 13 4 1326 1180 68 14 0 chr15 97199989 97200136 -6294838 + B1_Mur4 SINE Alu 1 149 -1 4 1326 216 0 0 0 chr15 97200201 97200225 -6294749 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 4 1326 1067 53 8 0 chr15 97200225 97200357 -6294617 - B1_Mus2 SINE Alu -13 134 2 4 1326 334 43 0 0 chr15 97200361 97200408 -6294566 + B1_Mm SINE Alu 101 147 0 4 1326 288 200 15 0 chr15 97200406 97200471 -6294503 + RLTR12A LTR ERVK 500 565 -3 4 1326 336 102 0 0 chr15 97200970 97201019 -6293955 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1326 198 143 0 0 chr15 97201046 97201081 -6293893 + (CCCCCT)n Simple_repeat Simple_repeat 5 39 0 4 1326 569 289 28 42 chr15 97201081 97201294 -6293680 - ID_B1 SINE B4 -14 210 1 4 1326 266 73 0 24 chr15 97201308 97201350 -6293624 + (TTTTC)n Simple_repeat Simple_repeat 2 42 0 4 1326 732 130 195 0 chr15 97201352 97201475 -6293499 - B1_Mm SINE Alu 0 147 1 4 1326 243 95 19 98 chr15 97202339 97202405 -6292569 - PB1D7 SINE Alu -1 119 56 4 1326 472 56 0 40 chr15 97202433 97202529 -6292445 - L1Md_F2 LINE L1 0 6582 6500 4 1326 2465 68 9 3 chr15 97202537 97202860 -6292114 - L1_Mus3 LINE L1 0 6638 6314 4 1326 2079 164 169 33 chr15 97202862 97203346 -6291628 + RMER4B LTR ERVK 25 574 -11 4 1326 227 287 21 94 chr15 97203325 97203421 -6291553 - B1F2 SINE Alu -47 102 14 4 1326 310 260 29 77 chr15 97203622 97203726 -6291248 - HAL1 LINE L1 -1536 971 873 4 1326 207 100 0 0 chr15 97204663 97204693 -6290281 + (TCC)n Simple_repeat Simple_repeat 1 30 0 4 1326 23 0 0 0 chr15 97205484 97205507 -6289467 + AT_rich Low_complexity Low_complexity 1 23 0 4 1326 1216 41 0 20 chr15 97205516 97205665 -6289309 - B1_Mm SINE Alu 0 147 2 4 1326 225 0 0 0 chr15 97206164 97206189 -6288785 + (CCA)n Simple_repeat Simple_repeat 2 26 0 4 1326 210 261 0 0 chr15 97206414 97206460 -6288514 + ID4_ SINE ID 38 83 0 4 1326 263 312 108 42 chr15 97207349 97207590 -6287384 - L2 LINE L2 -1372 2047 1791 4 1326 245 29 0 29 chr15 97207759 97207794 -6287180 + (GGGTG)n Simple_repeat Simple_repeat 3 36 0 4 1326 191 233 0 23 chr15 97207906 97207950 -6287024 - MIRc SINE MIR -115 153 111 4 1326 331 200 219 51 chr15 97208093 97208122 -6286852 + ID_B1 SINE B4 64 222 -1 4 1326 499 187 47 0 chr15 97208122 97208229 -6286745 + PB1D9 SINE Alu 9 120 0 4 1326 439 195 0 0 chr15 97208383 97208465 -6286509 - B1_Mus2 SINE Alu 0 147 66 4 1326 24 0 0 0 chr15 97208747 97208771 -6286203 + AT_rich Low_complexity Low_complexity 1 24 0 4 1326 502 198 112 32 chr15 97209307 97209432 -6285542 + B1_Mur2 SINE Alu 11 145 -4 4 1326 227 79 0 26 chr15 97209432 97209471 -6285503 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 4 1326 180 0 0 0 chr15 97210350 97210370 -6284604 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 4 1326 405 242 62 56 chr15 97211240 97211397 -6283577 + B3A SINE B2 39 195 -21 4 1326 362 239 58 66 chr15 97211666 97211787 -6283187 - PB1D7 SINE Alu 0 120 1 4 1326 238 274 0 0 chr15 97211832 97211905 -6283069 + T-rich Low_complexity Low_complexity 1 73 0 4 1326 754 256 28 9 chr15 97211921 97212134 -6282840 - ID_B1 SINE B4 -6 218 2 4 1326 654 171 48 16 chr15 97212205 97212330 -6282644 - B1_Mur4 SINE Alu 0 150 22 4 1326 251 209 176 55 chr15 97212271 97212362 -6282612 - MT2B LTR ERVL -361 240 139 4 1326 573 157 53 45 chr15 97212496 97212627 -6282347 + B1_Mur2 SINE Alu 1 132 -18 4 1326 406 302 19 0 chr15 97212635 97212741 -6282233 + PB1D10 SINE Alu 4 111 -6 4 1326 685 214 21 7 chr15 97212948 97213089 -6281885 - B1_Mur1 SINE Alu 0 149 7 4 1326 450 198 7 104 chr15 97212971 97213106 -6281868 - MT2B LTR ERVL -325 276 155 4 1326 371 308 64 80 chr15 97212985 97213172 -6281802 - B4 SINE B4 -93 199 16 4 1326 1230 61 0 0 chr15 97213475 97213623 -6281351 - B1_Mus1 SINE Alu 0 148 1 4 1326 490 235 73 7 chr15 97213709 97213846 -6281128 - B1_Mus2 SINE Alu -1 146 1 4 1326 355 281 32 43 chr15 97213865 97213958 -6281016 - B4A SINE B4 -66 226 135 4 1326 180 0 0 0 chr15 97215861 97215881 -6279093 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1326 233 232 18 0 chr15 97216138 97216194 -6278780 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1326 198 0 0 0 chr15 97216442 97216464 -6278510 + (TCTG)n Simple_repeat Simple_repeat 1 22 0 4 1326 502 321 69 8 chr15 97216480 97216652 -6278322 - ID_B1 SINE B4 -100 192 13 4 1326 313 309 150 12 chr15 97217499 97217666 -6277308 + MamRep605 Unknown Unknown 584 773 -103 4 1326 327 262 0 0 chr15 97217772 97217833 -6277141 + MT2A LTR ERVL 1 61 -472 4 1326 451 105 0 34 chr15 97217828 97217917 -6277057 + MT2A LTR ERVL 403 488 -45 4 1326 243 158 66 0 chr15 97217953 97218029 -6276945 + MT2A LTR ERVL 453 533 0 4 1326 611 153 13 105 chr15 97218029 97218081 -6276893 + MERVL_2A-int LTR ERVL 1 40 -5721 4 1326 1235 55 0 0 chr15 97218081 97218227 -6276747 - B1_Mus2 SINE Alu 0 147 2 4 1326 611 153 13 105 chr15 97218227 97218327 -6276647 + MERVL_2A-int LTR ERVL 41 139 -5622 4 1326 867 104 36 15 chr15 97218328 97218465 -6276509 - ORR1A2 LTR MaLR -187 140 1 4 1326 867 272 14 14 chr15 97218997 97219213 -6275761 - B3 SINE B2 0 216 1 4 1326 29 0 0 0 chr15 97219464 97219493 -6275481 + AT_rich Low_complexity Low_complexity 1 29 0 4 1326 2445 99 16 0 chr15 97219709 97220031 -6274943 + ORR1A2 LTR MaLR 1 327 0 5 1326 322 224 128 12 chr15 97221357 97221443 -6273531 - ID_B1 SINE B4 -7 217 122 5 1326 230 255 109 109 chr15 97221443 97221470 -6273504 - PB1D9 SINE Alu -1 101 1 5 1326 581 277 47 7 chr15 97221753 97221902 -6273072 + RSINE1 SINE B4 11 165 0 5 1326 246 210 65 0 chr15 97222063 97222125 -6272849 + ID4_ SINE ID 16 81 -2 5 1326 397 258 59 59 chr15 97222176 97222312 -6272662 + B1F SINE Alu 1 136 -13 5 1326 2296 98 6 12 chr15 97222313 97222634 -6272340 + ORR1A2 LTR MaLR 1 319 -8 5 1326 600 182 23 5 chr15 97222691 97222824 -6272150 - MTC LTR MaLR -159 220 77 5 1326 1155 52 0 0 chr15 97222824 97222960 -6272014 + B1_Mus2 SINE Alu 1 136 -11 5 1326 878 92 8 0 chr15 97222960 97223090 -6271884 + (GAGAA)n Simple_repeat Simple_repeat 1 131 0 5 1326 635 47 23 0 chr15 97223092 97223178 -6271796 + (GGAA)n Simple_repeat Simple_repeat 1 88 0 5 1326 780 143 0 0 chr15 97223194 97223313 -6271661 - MTC LTR MaLR -302 119 1 5 1326 681 274 12 12 chr15 97223343 97223513 -6271461 + B3A SINE B2 15 184 -14 5 1326 211 311 67 13 chr15 97223544 97223619 -6271355 + MIRb SINE MIR 162 240 -28 5 1326 5825 34 3 0 chr15 97223733 97224410 -6270564 + L1Md_T LINE L1 5904 6582 0 5 1326 1245 207 38 42 chr15 97224423 97224862 -6270112 - RLTR28 LTR ERVL 0 524 2 5 1326 298 303 0 0 chr15 97225546 97225622 -6269352 + ID4_ SINE ID 2 77 -6 5 1326 1356 58 0 0 chr15 97225634 97225808 -6269166 + (GGA)n Simple_repeat Simple_repeat 2 175 0 5 1326 600 221 38 0 chr15 97226993 97227124 -6267850 - RMER15 LTR ERVL 0 575 440 5 1326 1909 182 66 3 chr15 97227125 97227472 -6267502 + ORR1C1 LTR MaLR 2 370 -8 5 1326 1545 214 102 23 chr15 97227439 97227832 -6267142 - RMER15 LTR ERVL -123 452 29 5 1326 285 300 0 0 chr15 97227907 97227967 -6267007 - RMER15 LTR ERVL -515 60 1 5 1326 3304 51 5 0 chr15 97228012 97228406 -6266568 - MTA_Mm LTR MaLR 0 396 1 5 1326 261 0 0 0 chr15 97228525 97228554 -6266420 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1326 218 182 70 35 chr15 97229281 97229338 -6265636 - L2b LINE L2 -5 3370 3312 5 1326 435 250 200 5 chr15 97229475 97229660 -6265314 - ID_B1 SINE B4 -1 223 3 5 1326 1160 58 0 0 chr15 97229908 97230046 -6264928 + B1_Mus2 SINE Alu 1 138 -9 5 1326 468 0 0 0 chr15 97230046 97230098 -6264876 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 5 1326 424 59 0 29 chr15 97230154 97230224 -6264750 + (TTCC)n Simple_repeat Simple_repeat 1 68 0 5 1326 207 0 0 0 chr15 97230299 97230322 -6264652 + (TC)n Simple_repeat Simple_repeat 1 23 0 5 1326 594 187 93 47 chr15 97230323 97230452 -6264522 - B1_Mur1 SINE Alu -10 139 5 5 1326 253 339 116 53 chr15 97230678 97230873 -6264101 - MIRc SINE MIR -7 255 40 5 1326 377 20 20 0 chr15 97231192 97231242 -6263732 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 5 1326 3495 131 175 14 chr15 97231326 97231961 -6263013 + RMER19A LTR ERVK 1 737 0 5 1326 1044 323 59 32 chr15 97232084 97232225 -6262749 + L1MA5 LINE L1 5168 5299 -581 5 1326 1218 99 5 35 chr15 97232225 97232423 -6262551 - B2_Mm2 SINE B2 -2 193 2 5 1326 1093 302 73 18 chr15 97232423 97232564 -6262410 + L1MA5 LINE L1 5300 5478 -822 5 1326 329 0 0 24 chr15 97232564 97232606 -6262368 + (CAA)n Simple_repeat Simple_repeat 2 42 0 5 1326 1093 299 75 16 chr15 97232606 97233004 -6261970 + L1MA5 LINE L1 5479 5904 -396 5 1326 1496 269 107 71 chr15 97233011 97233599 -6261375 + RLTR18 LTR ERVK 5 613 -3 5 1326 414 0 0 0 chr15 97233637 97233683 -6261291 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1326 1600 31 0 30 chr15 97233839 97234037 -6260937 + B2_Mm1a SINE B2 2 193 0 5 1326 312 214 96 41 chr15 97234096 97234242 -6260732 + L1MC5 LINE L1 7541 7694 -267 5 1326 230 323 41 10 chr15 97234261 97234358 -6260616 + B1F SINE Alu 3 102 -47 5 1326 357 278 86 9 chr15 97235601 97235717 -6259257 + PB1 SINE Alu 1 125 -2 5 1326 276 286 0 0 chr15 97235731 97235794 -6259180 + ID4_ SINE ID 7 69 -14 5 1326 1655 36 0 0 chr15 97235853 97236045 -6258929 - B2_Mm1a SINE B2 -1 192 1 5 1326 998 141 57 127 chr15 97236316 97236600 -6258374 - RMER4B LTR ERVK -1 465 248 5 1326 315 141 105 105 chr15 97236594 97236689 -6258285 - RMER4B LTR ERVK -490 95 1 5 1326 631 182 212 20 chr15 97236689 97236839 -6258135 + URR1A DNA MER1_type 45 223 -3 5 1326 621 184 178 32 chr15 97237025 97237210 -6257764 + B3 SINE B2 2 213 -3 5 1326 765 266 81 44 chr15 97237221 97237516 -6257458 + Lx6 LINE L1 7099 7404 -56 5 1326 183 205 16 49 chr15 97237524 97237647 -6257327 + GA-rich Low_complexity Low_complexity 1 119 0 5 1326 352 167 11 32 chr15 97237763 97237856 -6257118 + Lx6 LINE L1 7354 7444 -16 5 1326 2187 77 36 16 chr15 97241462 97241767 -6253207 - ORR1A2 LTR MaLR -16 311 1 5 1326 1000 229 23 5 chr15 97242177 97242396 -6252578 + ID_B1 SINE B4 2 224 0 5 1326 1481 58 16 5 chr15 97242552 97242744 -6252230 + B2_Mm2 SINE B2 2 195 0 5 1326 286 330 92 27 chr15 97242750 97242934 -6252040 + MIR SINE MIR 9 204 -58 5 1326 1556 195 5 168 chr15 97243229 97243653 -6251321 + ORR1D2 LTR MaLR 14 368 -2 5 1326 681 317 73 46 chr15 97243653 97243907 -6251067 - MER34A LTR ERV1 -308 263 3 5 1326 316 222 28 55 chr15 97244212 97244477 -6250497 + CT-rich Low_complexity Low_complexity 1 257 0 5 1326 384 22 0 0 chr15 97246249 97246294 -6248680 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1326 1080 168 78 37 chr15 97246742 97246959 -6248015 + URR1A DNA MER1_type 1 226 0 5 1326 284 243 54 0 chr15 97247418 97247492 -6247482 - PB1D10 SINE Alu -31 86 9 5 1326 314 45 23 0 chr15 97247519 97247563 -6247411 + (GGA)n Simple_repeat Simple_repeat 3 47 0 5 1326 290 237 107 45 chr15 97247777 97247874 -6247100 - RSINE1 SINE B4 -2 163 78 5 1326 308 257 0 91 chr15 97247918 97247963 -6247011 - B4A SINE B4 -173 119 81 5 1326 1539 238 57 0 chr15 97247963 97248312 -6246662 - ORR1D2 LTR MaLR -1 369 1 5 1326 308 257 0 91 chr15 97248312 97248343 -6246631 - B4A SINE B4 -212 80 50 5 1326 895 201 23 60 chr15 97248348 97248421 -6246553 + B3 SINE B2 1 71 -145 5 1326 420 20 0 0 chr15 97248421 97248470 -6246504 + (TC)n Simple_repeat Simple_repeat 1 49 0 5 1326 895 201 23 60 chr15 97248470 97248487 -6246487 + B3 SINE B2 72 91 -125 5 1326 207 0 0 0 chr15 97248487 97248510 -6246464 + (CCA)n Simple_repeat Simple_repeat 1 23 0 5 1326 895 201 23 60 chr15 97248510 97248635 -6246339 + B3 SINE B2 92 209 -7 5 1326 607 271 10 62 chr15 97248637 97248830 -6246144 + MTE-int LTR MaLR 645 827 -753 5 1326 1220 281 174 14 chr15 97248851 97249363 -6245611 - MTEa-int LTR MaLR -967 613 20 5 1326 749 224 145 5 chr15 97249363 97249556 -6245418 - MTEa LTR MaLR 0 379 160 5 1326 23 33 0 0 chr15 97249559 97249589 -6245385 + AT_rich Low_complexity Low_complexity 1 30 0 5 1326 270 315 11 43 chr15 97249642 97249735 -6245239 - RSINE1 SINE B4 -5 160 71 5 1326 458 285 101 131 chr15 97249743 97249950 -6245024 - MTD LTR MaLR -15 364 132 5 1326 1423 90 16 0 chr15 97249950 97250139 -6244835 - B2_Mm2 SINE B2 -2 193 2 5 1326 458 278 24 188 chr15 97250139 97250282 -6244692 - MTD LTR MaLR -288 131 1 5 1326 234 149 0 41 chr15 97250337 97250386 -6244588 + T-rich Low_complexity Low_complexity 1 47 0 5 1326 1124 75 7 7 chr15 97250386 97250533 -6244441 - B1_Mus1 SINE Alu -1 147 1 5 1326 205 27 81 0 chr15 97250576 97250613 -6244361 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 5 1326 3036 166 2 8 chr15 97250705 97251197 -6243777 + RLTR19 LTR ERVK 11 499 0 5 1326 1099 208 80 132 chr15 97251254 97251692 -6243282 - MT2A LTR ERVL -48 553 1 5 1326 301 304 25 0 chr15 97251692 97251758 -6243216 - RSINE1 SINE B4 -51 114 47 5 1326 2528 138 6 131 chr15 97251758 97252268 -6242706 - RLTR41 LTR ERV1 0 446 1 5 1326 301 304 25 0 chr15 97252268 97252280 -6242694 - RSINE1 SINE B4 -119 46 35 5 1326 717 306 0 16 chr15 97252295 97252478 -6242496 - MTE2b LTR MaLR -199 180 1 5 1326 1154 45 0 0 chr15 97252546 97252680 -6242294 + B1_Mm SINE Alu 1 134 -13 5 1326 243 0 0 0 chr15 97252680 97252707 -6242267 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 5 1326 879 252 105 34 chr15 97253768 97254167 -6240807 + RLTR11B LTR ERVK 7 424 -17 5 1326 216 0 0 0 chr15 97254299 97254323 -6240651 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1326 925 148 0 7 chr15 97254412 97254562 -6240412 - B1_Mur4 SINE Alu 0 150 2 5 1327 580 274 19 25 chr15 97255677 97255847 -6239127 + RLTR11A2 LTR ERVK 1 170 -275 5 1327 944 67 185 7 chr15 97255824 97255975 -6238999 + B2_Mm2 SINE B2 9 186 -9 5 1327 1229 41 7 0 chr15 97255983 97256128 -6238846 + B1_Mm SINE Alu 2 147 0 5 1327 1840 132 83 14 chr15 97256161 97256523 -6238451 + RLTR11A2 LTR ERVK 141 527 0 5 1327 324 70 0 0 chr15 97256754 97256797 -6238177 + (TTCTG)n Simple_repeat Simple_repeat 4 46 0 5 1327 456 216 61 20 chr15 97256882 97256981 -6237993 - PB1D7 SINE Alu -5 115 13 5 1327 341 248 19 67 chr15 97256895 97256999 -6237975 - ID_B1 SINE B4 -46 178 80 5 1327 1540 33 11 16 chr15 97257073 97257258 -6237716 - B2_Mm1a SINE B2 -8 185 2 5 1327 49 32 0 0 chr15 97257386 97257449 -6237525 + AT_rich Low_complexity Low_complexity 1 63 0 5 1327 243 0 0 0 chr15 97257649 97257676 -6237298 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1327 1659 36 0 10 chr15 97258128 97258323 -6236651 + B2_Mm1a SINE B2 1 193 0 5 1327 929 143 14 0 chr15 97258344 97258484 -6236490 + B1_Mus2 SINE Alu 5 146 -1 5 1327 623 228 174 0 chr15 97258510 97258694 -6236280 - B3 SINE B2 0 216 1 5 1327 2100 168 8 8 chr15 97258732 97259099 -6235875 - ORR1B2 LTR MaLR 0 367 1 5 1327 180 152 0 0 chr15 97259449 97259482 -6235492 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 1327 324 70 0 0 chr15 97259632 97259675 -6235299 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 1327 310 324 109 36 chr15 97259836 97260083 -6234891 - L2a LINE L2 -61 3365 3101 5 1327 1675 173 67 72 chr15 97260087 97260504 -6234470 + RLTR31A_Mm LTR ERVK 1 415 -169 5 1327 303 93 0 0 chr15 97260527 97260570 -6234404 + (CACCC)n Simple_repeat Simple_repeat 4 46 0 6 1327 948 70 0 8 chr15 97260670 97260800 -6234174 - B1_Mus2 SINE Alu 0 147 19 6 1327 393 331 129 25 chr15 97261135 97261596 -6233378 + MER90 LTR ERV1 30 511 -64 6 1327 207 0 0 0 chr15 97261994 97262017 -6232957 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 1327 393 278 142 126 chr15 97262821 97263138 -6231836 + MER77 LTR ERVL 53 374 -233 6 1327 234 105 0 0 chr15 97263160 97263198 -6231776 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1327 627 173 4 260 chr15 97263210 97263316 -6231658 - ORR1D1 LTR MaLR -205 169 111 6 1327 1682 171 47 131 chr15 97263316 97263513 -6231461 - MTB_Mm LTR MaLR 0 407 211 6 1327 564 56 0 0 chr15 97263513 97263585 -6231389 + (TTTC)n Simple_repeat Simple_repeat 1 72 0 6 1327 1682 171 47 131 chr15 97263585 97263831 -6231143 - MTB_Mm LTR MaLR -197 210 1 6 1327 627 173 4 260 chr15 97263831 97263951 -6231023 - ORR1D1 LTR MaLR -264 110 1 6 1327 955 136 13 0 chr15 97263997 97264235 -6230739 + RMER6A LTR ERVK 1 287 -469 6 1327 884 161 7 0 chr15 97264223 97264366 -6230608 + RMER6A LTR ERVK 613 756 0 6 1327 337 286 19 9 chr15 97264766 97264872 -6230102 - PB1D7 SINE Alu 0 120 14 6 1327 1124 113 46 46 chr15 97265232 97265427 -6229547 - B2_Mm2 SINE B2 0 195 1 6 1327 206 279 16 0 chr15 97265751 97265812 -6229162 + L2a LINE L2 2604 2665 -754 6 1327 1967 202 138 96 chr15 97266207 97266775 -6228199 + RMER19C LTR ERVK 1 588 -23 6 1327 183 42 0 0 chr15 97266775 97266799 -6228175 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6 1327 1967 202 138 96 chr15 97266799 97266816 -6228158 + RMER19C LTR ERVK 589 610 -1 6 1327 513 311 166 31 chr15 97267024 97267671 -6227303 + L2a LINE L2 2663 3400 -26 6 1327 1300 53 65 12 chr15 97267775 97267945 -6227029 - B2_Mm2 SINE B2 -16 179 1 6 1327 620 287 75 27 chr15 97267986 97268172 -6226802 - B3A SINE B2 -1 197 3 6 1327 1711 222 90 4 chr15 97269126 97269210 -6225764 - MTD LTR MaLR -14 405 285 6 1327 3827 130 157 3 chr15 97269210 97269849 -6225125 - RMER19A LTR ERVK 0 737 1 6 1327 1711 218 96 3 chr15 97269849 97270141 -6224833 - MTD LTR MaLR -87 332 9 6 1327 222 62 0 0 chr15 97270450 97270482 -6224492 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 6 1327 1018 68 47 20 chr15 97270482 97270631 -6224343 - B2_Mm2 SINE B2 -42 153 1 6 1327 882 216 42 38 chr15 97270652 97270864 -6224110 - B3 SINE B2 -2 214 2 6 1327 2415 169 29 2 chr15 97271104 97271514 -6223460 + MTC LTR MaLR 1 421 0 6 1327 884 194 142 15 chr15 97271705 97271909 -6223065 - MTEb LTR MaLR -149 230 1 6 1327 326 280 139 57 chr15 97271978 97272110 -6222864 - L1MEf LINE L1 -4361 1839 1696 6 1327 270 321 43 26 chr15 97272110 97272225 -6222749 - PB1D10 SINE Alu 0 117 1 6 1327 326 280 139 57 chr15 97272225 97272460 -6222514 - L1MEf LINE L1 -4505 1695 1443 6 1327 246 62 0 0 chr15 97272467 97272499 -6222475 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 6 1327 559 268 176 0 chr15 97272701 97272854 -6222120 - B3A SINE B2 -18 180 1 6 1327 2706 41 73 3 chr15 97273334 97273675 -6221299 + RLTR10B2 LTR ERVK 1 365 0 6 1327 342 0 0 0 chr15 97274110 97274148 -6220826 + (CTG)n Simple_repeat Simple_repeat 2 39 0 6 1327 324 279 94 75 chr15 97274187 97274297 -6220677 + MER34A LTR ERV1 1 120 -451 6 1327 1362 155 0 13 chr15 97274297 97274526 -6220448 + URR1A DNA MER1_type 1 226 0 6 1327 324 291 89 79 chr15 97274526 97274601 -6220373 + MER34A LTR ERV1 120 185 -357 6 1327 306 304 139 20 chr15 97274718 97274869 -6220105 + MER34A LTR ERV1 403 571 0 6 1327 2606 38 3 6 chr15 97275039 97275368 -6219606 + MT-int LTR MaLR 721 1349 -21 6 1327 361 349 42 19 chr15 97275478 97275694 -6219280 + L2a LINE L2 2950 3170 -256 6 1327 694 309 12 0 chr15 97275797 97275965 -6219009 + B3A SINE B2 1 170 -28 6 1327 261 0 0 0 chr15 97275965 97275994 -6218980 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1327 503 320 31 77 chr15 97275994 97276021 -6218953 + B2_Mm2 SINE B2 161 187 -8 6 1327 222 143 0 0 chr15 97276098 97276133 -6218841 - ID4_ SINE ID 0 83 49 6 1327 730 131 65 14 chr15 97276132 97276271 -6218703 - B1_Mus2 SINE Alu -1 146 1 6 1327 338 335 105 28 chr15 97277832 97278013 -6216961 + MLT1H LTR MaLR 113 307 -242 6 1327 3438 28 13 0 chr15 97278197 97278588 -6216386 - MTA_Mm LTR MaLR 0 396 1 6 1327 411 193 0 0 chr15 97278698 97278781 -6216193 + CT-rich Low_complexity Low_complexity 3 85 0 6 1327 267 200 33 0 chr15 97278782 97278842 -6216132 - MTA_Mm LTR MaLR -155 241 180 6 1327 257 175 0 31 chr15 97278843 97278908 -6216066 + CT-rich Low_complexity Low_complexity 1 63 0 6 1327 518 258 42 0 chr15 97279359 97279479 -6215495 + B1F SINE Alu 18 142 -7 6 1327 201 180 115 0 chr15 97279496 97279557 -6215417 + L3b LINE CR1 161 228 -254 6 1327 318 269 98 49 chr15 97279614 97279798 -6215176 - HAL1 LINE L1 -1058 1449 1257 6 1327 189 351 51 51 chr15 97280857 97281034 -6213940 - L3 LINE CR1 -17 4472 4296 6 1327 538 192 0 19 chr15 97281447 97281542 -6213432 + ID_B1 SINE B4 121 214 -10 6 1327 189 74 0 0 chr15 97281542 97281569 -6213405 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1327 351 294 37 56 chr15 97281990 97282152 -6212822 - RSINE1 SINE B4 -5 160 2 6 1327 936 154 7 7 chr15 97282175 97282319 -6212655 - B1_Mur4 SINE Alu -6 144 1 6 1327 1175 87 98 0 chr15 97282514 97282687 -6212287 - B2_Mm2 SINE B2 -1 194 5 6 1327 1056 130 6 6 chr15 97283807 97283969 -6211005 + B2_Mm2 SINE B2 1 162 -33 6 1327 180 0 0 0 chr15 97283969 97283989 -6210985 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 6 1327 414 239 183 35 chr15 97284009 97284178 -6210796 + B2_Mm2 SINE B2 1 194 -1 6 1327 213 246 0 17 chr15 97284207 97284265 -6210709 + CT-rich Low_complexity Low_complexity 2 58 0 6 1327 215 345 143 41 chr15 97284499 97284778 -6210196 - L2 LINE L2 -345 3074 2765 6 1327 2366 83 3 27 chr15 97284778 97285113 -6209861 + ORR1A2 LTR MaLR 1 327 0 6 1327 215 345 143 41 chr15 97285113 97285126 -6209848 - L2 LINE L2 -655 2764 2752 6 1327 302 305 109 30 chr15 97285190 97285420 -6209554 - L2 LINE L2 -815 2604 2357 6 1327 319 292 50 8 chr15 97285498 97285619 -6209355 - MER33 DNA MER1_type -69 255 130 6 1327 294 294 82 0 chr15 97286792 97286877 -6208097 + HAL1 LINE L1 806 897 -1610 6 1327 308 306 75 33 chr15 97286922 97287229 -6207745 + HAL1 LINE L1 989 1308 -1199 6 1327 233 197 70 0 chr15 97287332 97287403 -6207571 + HAL1 LINE L1 1472 1547 -960 6 1327 294 302 17 8 chr15 97288168 97288285 -6206689 - L2 LINE L2 -1908 1511 1394 6 1327 255 125 0 0 chr15 97288465 97288505 -6206469 + (TCCCC)n Simple_repeat Simple_repeat 5 44 0 6 1327 712 298 199 13 chr15 97288534 97288922 -6206052 - Lx8 LINE L1 -55 7418 6959 6 1327 284 102 0 20 chr15 97289116 97289166 -6205808 + (CGGGG)n Simple_repeat Simple_repeat 3 51 0 6 1327 287 127 18 0 chr15 97289698 97289718 -6205256 + RMER19B LTR ERVK 2 21 -881 6 1327 266 0 29 0 chr15 97289718 97289752 -6205222 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1327 287 173 16 16 chr15 97289752 97289810 -6205164 + RMER19B LTR ERVK 22 77 -660 6 1327 239 315 21 78 chr15 97290299 97290440 -6204534 + MLT1J2 LTR MaLR 316 448 0 6 1327 2565 159 67 30 chr15 97291555 97292048 -6202926 + RLTR11A2 LTR ERVK 17 527 0 6 1327 831 30 0 0 chr15 97292129 97292229 -6202745 - B1_Mm SINE Alu -1 146 47 6 1327 303 189 105 26 chr15 97292171 97292247 -6202727 - RLTR25B LTR ERVK -519 509 428 6 1327 1208 41 0 13 chr15 97292340 97292489 -6202485 - B1_Mm SINE Alu 0 147 1 6 1327 402 262 0 0 chr15 97292615 97292699 -6202275 + PB1D10 SINE Alu 25 108 -9 6 1327 368 276 140 50 chr15 97292851 97293213 -6201761 + L1MC LINE L1 5291 5677 -2205 6 1327 665 214 15 8 chr15 97293271 97293403 -6201571 + B1_Mur1 SINE Alu 6 138 -11 6 1327 189 0 0 0 chr15 97293404 97293425 -6201549 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 6 1327 27 0 0 0 chr15 97293756 97293783 -6201191 + AT_rich Low_complexity Low_complexity 1 27 0 6 1327 445 303 154 34 chr15 97293806 97294073 -6200901 - B4 SINE B4 -20 272 11 6 1327 426 252 97 18 chr15 97294079 97294209 -6200765 - B1F SINE Alu -8 142 4 6 1327 2105 107 7 3 chr15 97294377 97294678 -6200296 + ORR1A3 LTR MaLR 3 304 -22 6 1327 581 232 39 62 chr15 97294685 97294922 -6200052 - LTRIS5 LTR ERV1 -8 439 238 6 1327 964 252 5 5 chr15 97296077 97296296 -6198678 - B4A SINE B4 -62 230 12 6 1327 713 243 15 78 chr15 97296578 97296783 -6198191 + B3A SINE B2 1 192 -6 6 1327 1093 89 32 0 chr15 97296875 97297032 -6197942 + B2_Mm2 SINE B2 2 163 -32 6 1327 495 92 23 11 chr15 97297034 97297122 -6197852 + (GGA)n Simple_repeat Simple_repeat 3 91 0 6 1327 311 345 66 46 chr15 97297124 97297276 -6197698 + HAL1-3A_ME LINE L1 2284 2438 -420 6 1327 1901 176 82 64 chr15 97297357 97297795 -6197179 + RLTR41 LTR ERV1 1 446 0 6 1327 509 277 217 18 chr15 97297835 97298052 -6196922 + MER21B LTR ERV1 40 299 -564 6 1327 654 279 120 68 chr15 97298181 97298489 -6196485 + MER21B LTR ERV1 466 789 -74 6 1327 351 0 0 0 chr15 97298969 97299008 -6195966 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1327 1150 45 0 0 chr15 97299008 97299142 -6195832 - B1_Mus1 SINE Alu -10 138 5 6 1327 223 222 0 0 chr15 97299908 97299953 -6195021 + PB1D10 SINE Alu 8 52 -65 6 1327 441 0 0 0 chr15 97299988 97300037 -6194937 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 1327 618 281 72 0 chr15 97300039 97300105 -6194869 + ID SINE ID 12 88 -136 6 1327 305 331 136 8 chr15 97300105 97300230 -6194744 + PB1D10 SINE Alu 1 141 -8 6 1327 387 0 0 0 chr15 97300961 97301004 -6193970 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1327 1254 79 90 0 chr15 97301093 97301270 -6193704 + B2_Mm2 SINE B2 2 194 -1 6 1327 1259 228 64 92 chr15 97301958 97302093 -6192881 - RMER10A LTR ERVL 0 442 335 6 1327 1489 130 185 20 chr15 97302093 97302445 -6192529 + RMER17C LTR ERVK 1 410 0 6 1327 1259 228 64 92 chr15 97302445 97302764 -6192210 - RMER10A LTR ERVL -108 334 1 6 1327 4520 14 0 0 chr15 97303343 97303836 -6191138 + MT2_Mm LTR ERVL 1 493 0 6 1327 39266 18 0 0 chr15 97303842 97308161 -6186813 + MERVL-int LTR ERVL 1041 5360 -125 6 1327 376 179 46 35 chr15 97308161 97308248 -6186726 + ORR1A3-int LTR MaLR 553 640 -1323 6 1327 314 26 0 0 chr15 97308248 97308286 -6186688 + MERVL-int LTR ERVL 5448 5485 0 6 1327 4501 10 0 12 chr15 97308286 97308785 -6186189 + MT2_Mm LTR ERVL 1 493 0 6 1327 393 286 12 5 chr15 97308786 97308892 -6186082 - ID_B1 SINE B4 -104 188 79 7 1327 2338 106 39 22 chr15 97309292 97309648 -6185326 - ORR1B1 LTR MaLR 0 394 33 7 1327 323 320 208 11 chr15 97309908 97310091 -6184883 + MER20 DNA MER1_type 1 219 0 7 1327 3455 41 0 128 chr15 97310462 97310962 -6184012 - RLTR10C LTR ERVK 0 436 1 7 1327 8247 34 0 0 chr15 97310962 97311893 -6183081 - MMERVK10C-int LTR ERVK 0 7581 6651 7 1327 42549 41 0 1 chr15 97311884 97316828 -6178146 - MMERVK10C-int LTR ERVK -1771 5810 870 7 1327 1965 94 155 105 chr15 97316826 97317206 -6177768 - MMERVK10C-int LTR ERVK -7182 399 1 7 1327 3425 46 0 128 chr15 97317206 97317706 -6177268 - RLTR10C LTR ERVK 0 436 1 7 1327 606 211 16 31 chr15 97318842 97318969 -6176005 - RMER20B LTR ERVK -502 125 1 7 1327 249 320 55 39 chr15 97319135 97319262 -6175712 - ID_B1 SINE B4 0 224 96 7 1327 1283 121 21 0 chr15 97319635 97319825 -6175149 + B2_Mm2 SINE B2 2 195 0 7 1327 1667 219 42 75 chr15 97320416 97320840 -6174134 + MTC LTR MaLR 1 410 -11 7 1327 3520 189 130 26 chr15 97320846 97321806 -6173168 + MTC-int LTR MaLR 86 1254 -4 7 1327 2460 117 45 30 chr15 97321810 97322082 -6172892 + MTC LTR MaLR 1 284 -137 7 1327 2786 75 85 3 chr15 97322082 97322470 -6172504 - RLTR9B2 LTR ERVK 0 420 1 7 1327 2460 117 45 30 chr15 97322470 97322595 -6172379 + MTC LTR MaLR 285 404 -17 7 1327 4497 59 12 14 chr15 97322614 97323179 -6171795 + LTRIS2 LTR ERV1 1 564 0 7 1327 898 228 14 10 chr15 97323259 97323467 -6171507 - B3 SINE B2 -5 211 3 7 1327 347 381 65 19 chr15 97323491 97323705 -6171269 - MER34A LTR ERV1 -192 379 156 7 1327 26 64 0 0 chr15 97324350 97324397 -6170577 + AT_rich Low_complexity Low_complexity 1 47 0 7 1327 479 336 7 7 chr15 97324448 97324583 -6170391 + RSINE1 SINE B4 7 141 -24 7 1327 414 0 0 0 chr15 97324590 97324636 -6170338 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1327 2033 144 10 3 chr15 97324709 97325016 -6169958 - RLTR27 LTR ERVK 0 309 1 7 1327 294 291 65 46 chr15 97325056 97325164 -6169810 - Tigger7 DNA MER2_type 0 2491 2382 7 1327 2934 155 22 53 chr15 97325165 97325709 -6169265 + RLTR11A2 LTR ERVK 1 527 0 7 1327 1037 193 31 0 chr15 97325709 97325901 -6169073 + RLTR33 LTR ERVK 479 676 -2 7 1327 1724 155 63 39 chr15 97326362 97326775 -6168199 - ORR1B2 LTR MaLR 0 378 6 7 1327 213 0 81 0 chr15 97326943 97326980 -6167994 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 7 1327 26 30 0 0 chr15 97327543 97327576 -6167398 + AT_rich Low_complexity Low_complexity 1 33 0 7 1327 1806 190 54 10 chr15 97327877 97328265 -6166709 - MTD LTR MaLR -14 405 1 7 1327 498 294 62 6 chr15 97328316 97328477 -6166497 - MTE2b LTR MaLR -208 171 2 7 1327 763 248 93 23 chr15 97328478 97328693 -6166281 + MLT1D LTR MaLR 17 246 -259 7 1327 300 27 0 0 chr15 97328844 97328881 -6166093 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1327 230 318 35 26 chr15 97329338 97329451 -6165523 + PB1D10 SINE Alu 2 115 -2 7 1327 233 186 17 17 chr15 97329451 97329511 -6165463 + A-rich Low_complexity Low_complexity 1 60 0 7 1327 552 281 39 6 chr15 97329659 97329838 -6165136 - MER57E1 LTR ERV1 0 372 188 7 1327 679 169 263 6 chr15 97329850 97330029 -6164945 + URR1B DNA MER1_type 1 225 0 7 1327 942 123 18 0 chr15 97330125 97330296 -6164678 + (GA)n Simple_repeat Simple_repeat 2 175 0 7 1327 1157 95 0 0 chr15 97331208 97331356 -6163618 - B1_Mus1 SINE Alu 0 148 1 7 1327 266 192 32 32 chr15 97331453 97331609 -6163365 + (TG)n Simple_repeat Simple_repeat 2 157 0 7 1327 249 211 54 22 chr15 97331624 97331716 -6163258 + (TG)n Simple_repeat Simple_repeat 2 96 0 7 1327 213 131 44 67 chr15 97331728 97331818 -6163156 + (TG)n Simple_repeat Simple_repeat 2 89 0 7 1327 277 188 29 14 chr15 97331839 97331909 -6163065 + (TG)n Simple_repeat Simple_repeat 2 72 0 7 1327 756 256 43 10 chr15 97332315 97332524 -6162450 - B3 SINE B2 0 216 1 7 1327 2172 166 13 26 chr15 97333261 97333461 -6161513 - ORR1C1 LTR MaLR 0 378 175 7 1327 2162 136 175 53 chr15 97333461 97333936 -6161038 + RMER16 LTR ERVK 1 533 0 7 1327 2172 166 13 26 chr15 97333936 97334118 -6160856 - ORR1C1 LTR MaLR -204 174 1 7 1327 435 38 0 0 chr15 97334141 97334194 -6160780 + (CA)n Simple_repeat Simple_repeat 1 53 0 7 1327 336 293 67 91 chr15 97334715 97334880 -6160094 - B4A SINE B4 -47 245 85 7 1327 255 290 142 74 chr15 97334718 97334738 -6160236 - MT2B LTR ERVL -262 339 274 7 1327 715 211 38 30 chr15 97334738 97334870 -6160104 - B1_Mur1 SINE Alu -6 143 11 7 1327 255 290 142 74 chr15 97334870 97334908 -6160066 - MT2B LTR ERVL -262 273 137 7 1327 474 162 40 17 chr15 97335146 97335322 -6159652 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 7 1327 471 298 54 33 chr15 97335330 97335514 -6159460 - ORR1E LTR MaLR -171 188 1 7 1327 2043 153 223 108 chr15 97335521 97336135 -6158839 + RMER12 LTR ERVK 533 1217 -105 7 1327 1084 83 14 7 chr15 97336755 97336901 -6158073 - B1_Mm SINE Alu 0 147 1 7 1327 198 160 0 0 chr15 97336987 97337037 -6157937 + C-rich Low_complexity Low_complexity 1 50 0 7 1327 680 176 40 0 chr15 97337037 97337162 -6157812 + ORR1E LTR MaLR 24 153 -206 7 1327 333 19 56 0 chr15 97337162 97337216 -6157758 + (TTG)n Simple_repeat Simple_repeat 1 57 0 7 1327 630 79 101 0 chr15 97337216 97337305 -6157669 - B1_Mus1 SINE Alu -13 135 38 7 1327 369 293 61 68 chr15 97337306 97337505 -6157469 + ORR1E LTR MaLR 140 358 -21 7 1327 262 268 0 53 chr15 97338730 97338805 -6156169 + MIR SINE MIR 172 242 -20 7 1327 514 177 21 10 chr15 97339302 97339399 -6155575 - MT2A LTR ERVL -350 183 86 7 1327 691 195 31 8 chr15 97339385 97339514 -6155460 - MT2A LTR ERVL -400 133 2 7 1327 202 284 36 36 chr15 97339960 97340044 -6154930 - L2b LINE L2 -4 3371 3288 7 1327 3402 168 91 27 chr15 97340660 97341317 -6153657 + RLTR25B LTR ERVK 1 699 -329 7 1327 277 294 251 55 chr15 97341994 97342376 -6152598 + MLT1H2 LTR MaLR 20 476 -13 7 1327 438 269 29 0 chr15 97342712 97342816 -6152158 + RSINE1 SINE B4 20 126 -39 7 1327 2668 52 25 33 chr15 97342825 97343011 -6151963 + MTB LTR MaLR 43 224 -176 7 1327 2573 64 0 0 chr15 97343011 97343322 -6151652 + RLTR10E LTR ERVK 1 311 0 7 1327 2668 52 25 33 chr15 97343322 97343496 -6151478 + MTB LTR MaLR 225 400 0 7 1327 860 153 42 0 chr15 97344097 97344241 -6150733 + B1_Mur4 SINE Alu 1 150 0 7 1327 2721 184 6 43 chr15 97344914 97345187 -6149787 + Lx3B LINE L1 6433 6692 -281 7 1327 198 0 0 0 chr15 97345187 97345209 -6149765 + (CCCA)n Simple_repeat Simple_repeat 2 23 0 7 1327 2721 184 6 43 chr15 97345209 97345465 -6149509 + Lx3B LINE L1 6693 6941 -32 7 1327 803 191 6 53 chr15 97345473 97345644 -6149330 - URR1B DNA MER1_type -61 164 2 7 1327 380 349 20 20 chr15 97348169 97348318 -6146656 + MLT1A0 LTR MaLR 1 149 -216 7 1327 693 75 418 8 chr15 97349199 97349333 -6145641 + B2_Mm2 SINE B2 1 189 -6 7 1327 406 293 27 19 chr15 97349398 97349555 -6145419 + L1MD LINE L1 3483 3640 -2506 7 1327 433 337 24 45 chr15 97349807 97350099 -6144875 + L1MD LINE L1 4771 5056 -1090 7 1327 201 69 0 0 chr15 97350156 97350174 -6144800 + (A)n Simple_repeat Simple_repeat 1 18 0 7 1327 1592 27 27 0 chr15 97350174 97350361 -6144613 + B2_Mm1a SINE B2 2 193 0 7 1327 201 69 0 0 chr15 97350361 97350371 -6144603 + (A)n Simple_repeat Simple_repeat 1 10 0 7 1327 361 255 98 0 chr15 97350487 97350589 -6144385 + ORR1E LTR MaLR 256 367 -12 7 1327 3408 296 126 41 chr15 97350594 97351433 -6143541 + ORR1E-int LTR MaLR 1 891 -689 7 1327 3510 25 10 2 chr15 97351433 97351830 -6143144 + MTB LTR MaLR 1 400 0 7 1327 3408 296 126 41 chr15 97351830 97351890 -6143084 + ORR1E-int LTR MaLR 892 946 -634 7 1327 1188 49 5 35 chr15 97351890 97352291 -6142683 + (TG)n Simple_repeat Simple_repeat 1 389 0 7 1327 3408 296 126 41 chr15 97352291 97352797 -6142177 + ORR1E-int LTR MaLR 947 1528 -52 7 1327 568 306 76 30 chr15 97352797 97353033 -6141941 + ORR1E LTR MaLR 4 250 -109 7 1327 198 91 0 0 chr15 97353112 97353145 -6141829 + (A)n Simple_repeat Simple_repeat 1 33 0 7 1327 530 269 158 53 chr15 97353147 97353527 -6141447 + L1MD LINE L1 5396 5815 -427 7 1327 2451 69 7 5 chr15 97353529 97353853 -6141121 + ORR1A2 LTR MaLR 1 377 -2 7 1327 272 343 81 15 chr15 97354067 97354203 -6140771 - MLT1J LTR MaLR -67 445 301 7 1327 1762 216 24 47 chr15 97354428 97354641 -6140333 - ORR1D1 LTR MaLR 0 374 165 7 1327 612 40 0 0 chr15 97354641 97354716 -6140258 + (GGAGA)n Simple_repeat Simple_repeat 2 76 0 7 1327 1762 216 24 47 chr15 97354716 97354859 -6140115 - ORR1D1 LTR MaLR -210 164 26 7 1327 3250 69 2 2 chr15 97354859 97355266 -6139708 - MTB_Mm LTR MaLR 0 407 1 7 1327 1762 216 24 47 chr15 97355266 97355291 -6139683 - ORR1D1 LTR MaLR -349 25 1 7 1327 383 273 0 20 chr15 97355291 97355391 -6139583 + RMER30 DNA MER1_type 102 199 -3 7 1327 343 263 105 23 chr15 97355404 97355533 -6139441 - MLT1J LTR MaLR -365 184 53 7 1327 249 344 19 103 chr15 97355605 97355658 -6139316 - Arthur1B DNA Tip100 -1084 141 95 7 1327 2095 122 64 91 chr15 97355658 97355710 -6139264 - ORR1B1 LTR MaLR 0 394 350 7 1327 1371 100 0 16 chr15 97355710 97355903 -6139071 - B2_Mm2 SINE B2 -5 190 1 7 1327 2095 122 64 91 chr15 97355903 97356255 -6138719 - ORR1B1 LTR MaLR -45 349 1 7 1327 249 344 19 103 chr15 97356255 97356308 -6138666 - Arthur1B DNA Tip100 -1131 94 44 7 1327 242 258 168 21 chr15 97356495 97356590 -6138384 + MIRb SINE MIR 100 208 -60 7 1327 1713 21 0 0 chr15 97357251 97357443 -6137531 - B2_Mm1a SINE B2 -1 192 1 7 1327 932 136 6 0 chr15 97357463 97357639 -6137335 + (TG)n Simple_repeat Simple_repeat 2 178 0 7 1327 363 283 18 0 chr15 97357857 97357970 -6137004 + PB1D10 SINE Alu 1 115 -2 7 1327 325 250 12 84 chr15 97358022 97358105 -6136869 + ID4_ SINE ID 7 83 0 7 1327 396 294 50 8 chr15 97358114 97358234 -6136740 - B1F SINE Alu 0 149 25 7 1327 360 170 132 33 chr15 97358380 97358471 -6136503 - PB1D10 SINE Alu 0 117 18 7 1327 243 0 0 0 chr15 97358670 97358697 -6136277 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1327 27 29 0 0 chr15 97359053 97359087 -6135887 + AT_rich Low_complexity Low_complexity 1 34 0 7 1327 284 331 70 38 chr15 97359097 97359254 -6135720 - RSINE1 SINE B4 -2 163 2 7 1327 284 302 100 36 chr15 97359386 97359496 -6135478 + ORR1E LTR MaLR 57 173 -186 7 1327 351 0 0 0 chr15 97359645 97359684 -6135290 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 7 1327 1748 308 77 81 chr15 97359694 97360509 -6134465 + ORR1E-int LTR MaLR 1 812 -768 7 1327 317 292 123 49 chr15 97360488 97360650 -6134324 - RLTR9E LTR ERVK -6 409 236 7 1327 1214 117 0 22 chr15 97360826 97361010 -6133964 - B2_Mm2 SINE B2 -14 181 2 7 1327 1706 285 122 48 chr15 97361023 97361727 -6133247 + ORR1E-int LTR MaLR 770 1527 -53 7 1327 278 292 174 15 chr15 97361727 97361859 -6133115 + ORR1E LTR MaLR 1 153 -206 7 1327 426 39 0 0 chr15 97362069 97362121 -6132853 + (TTCC)n Simple_repeat Simple_repeat 4 55 0 7 1327 333 68 0 0 chr15 97362121 97362165 -6132809 + (TC)n Simple_repeat Simple_repeat 2 45 0 7 1327 401 0 20 0 chr15 97362706 97362755 -6132219 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 1327 279 0 0 0 chr15 97363451 97363482 -6131492 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 1327 388 271 46 18 chr15 97363483 97363592 -6131382 + RSINE1 SINE B4 14 125 -40 8 1327 222 385 60 0 chr15 97365027 97365110 -6129864 + RSINE1 SINE B4 69 156 -9 8 1327 351 0 0 0 chr15 97365131 97365170 -6129804 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 1327 684 149 251 18 chr15 97366691 97366862 -6128112 + B3 SINE B2 1 211 -5 8 1327 266 295 112 11 chr15 97367372 97367461 -6127513 - MER63B DNA AcHobo -26 410 313 8 1327 534 240 10 0 chr15 97367473 97367569 -6127405 + B3 SINE B2 106 202 -14 8 1327 210 98 49 0 chr15 97367780 97367821 -6127153 + (GA)n Simple_repeat Simple_repeat 2 44 0 8 1327 772 126 6 12 chr15 97367822 97367868 -6127106 + (GAA)n Simple_repeat Simple_repeat 2 48 0 8 1327 1079 129 6 0 chr15 97367868 97368046 -6126928 + (GGA)n Simple_repeat Simple_repeat 2 180 0 8 1327 772 126 6 12 chr15 97368046 97368160 -6126814 + (GAA)n Simple_repeat Simple_repeat 1 113 0 8 1327 621 27 0 0 chr15 97368160 97368235 -6126739 + (GA)n Simple_repeat Simple_repeat 2 76 0 8 1327 1474 58 0 21 chr15 97368962 97369154 -6125820 + B2_Mm2 SINE B2 2 189 -6 8 1327 33 0 0 0 chr15 97369164 97369197 -6125777 + AT_rich Low_complexity Low_complexity 1 33 0 8 1327 481 282 205 46 chr15 97369584 97369832 -6125142 + MLT1J2 LTR MaLR 37 333 -115 8 1327 1669 158 139 23 chr15 97369832 97370002 -6124972 + ORR1C2 LTR MaLR 1 167 -217 8 1327 423 0 0 0 chr15 97370002 97370049 -6124925 + (TC)n Simple_repeat Simple_repeat 2 48 0 8 1327 1669 158 139 23 chr15 97370049 97370222 -6124752 + ORR1C2 LTR MaLR 168 383 -1 8 1327 481 282 205 46 chr15 97370222 97370300 -6124674 + MLT1J2 LTR MaLR 334 415 -33 8 1327 195 204 0 22 chr15 97370998 97371043 -6123931 - L2 LINE L2 -1594 1825 1782 8 1327 529 232 13 72 chr15 97371249 97371402 -6123572 + RSINE1 SINE B4 1 144 -21 8 1327 910 149 210 11 chr15 97371446 97371622 -6123352 - B3 SINE B2 -5 211 1 8 1327 23 33 0 0 chr15 97371622 97371652 -6123322 + AT_rich Low_complexity Low_complexity 1 30 0 8 1327 367 203 0 39 chr15 97371786 97371858 -6123116 + MER82 DNA MER2_type 446 514 -139 8 1327 305 295 0 31 chr15 97371858 97371956 -6123018 - MLT1A1 LTR MaLR -2 406 312 8 1327 189 0 0 0 chr15 97372707 97372728 -6122246 + (T)n Simple_repeat Simple_repeat 1 21 0 8 1327 1332 248 104 9 chr15 97373071 97373397 -6121577 - MTEa LTR MaLR -8 371 15 8 1327 993 284 78 31 chr15 97373560 97373775 -6121199 - MTD LTR MaLR -41 378 146 8 1327 2571 147 95 8 chr15 97373775 97374261 -6120713 - RLTR11A LTR ERVK 0 528 1 8 1327 993 284 78 31 chr15 97374261 97374404 -6120570 - MTD LTR MaLR -274 145 3 8 1327 412 291 43 0 chr15 97374902 97375019 -6119955 - MIRc SINE MIR -35 233 112 8 1327 276 30 0 0 chr15 97375279 97375312 -6119662 + (TTG)n Simple_repeat Simple_repeat 2 34 0 8 1327 664 146 15 24 chr15 97375327 97375467 -6119507 - RLTR1B LTR ERV1 -72 552 355 8 1327 814 155 329 0 chr15 97376059 97376220 -6118754 + B3 SINE B2 3 216 0 8 1327 550 337 44 132 chr15 97376856 97377464 -6117510 - MER77 LTR ERVL -9 598 44 8 1327 588 269 108 91 chr15 97378001 97378287 -6116687 + B4A SINE B4 2 292 0 8 1327 586 346 146 24 chr15 97378362 97378829 -6116145 + L1M5 LINE L1 4347 4870 -1276 8 1327 677 236 61 35 chr15 97378864 97379062 -6115912 + B3 SINE B2 8 210 -6 8 1327 21 0 0 0 chr15 97379648 97379669 -6115305 + AT_rich Low_complexity Low_complexity 1 21 0 8 1327 480 266 0 0 chr15 97379820 97379989 -6114985 + (TATAG)n Simple_repeat Simple_repeat 2 170 0 8 1327 666 168 51 45 chr15 97380403 97380559 -6114415 - RLTRETN_Mm LTR ERVK 0 322 166 8 1327 2723 108 70 37 chr15 97380559 97381019 -6113955 - IAPLTR2_Mm LTR ERVK 0 475 1 8 165 59209 12 2 5 chr15 97381019 97387514 -6107460 - IAPEz-int LTR ERVK 0 6481 8 8 1328 2708 108 70 37 chr15 97387514 97387974 -6107000 - IAPLTR2_Mm LTR ERVK 0 475 1 8 1328 353 179 94 116 chr15 97387975 97388141 -6106833 - RLTRETN_Mm LTR ERVK -148 261 35 8 1328 189 0 0 0 chr15 97388171 97388192 -6106782 + (TGG)n Simple_repeat Simple_repeat 2 22 0 8 1328 189 0 0 0 chr15 97388771 97388792 -6106182 + (TTG)n Simple_repeat Simple_repeat 2 22 0 8 1328 2073 174 118 4 chr15 97389571 97390027 -6104947 + RLTR28 LTR ERVL 3 510 -14 8 1328 250 169 0 30 chr15 97390518 97390585 -6104389 + (GGGTG)n Simple_repeat Simple_repeat 3 67 0 8 1328 271 162 23 159 chr15 97390664 97390724 -6104250 + PB1D10 SINE Alu 42 95 -22 8 1328 3994 99 50 7 chr15 97390724 97391284 -6103690 - MT2B2 LTR ERVL 0 584 1 8 1328 271 162 23 159 chr15 97391284 97391311 -6103663 + PB1D10 SINE Alu 96 117 0 8 1328 222 37 0 0 chr15 97392145 97392172 -6102802 + (CA)n Simple_repeat Simple_repeat 1 27 0 8 1328 248 71 48 0 chr15 97392255 97392297 -6102677 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 8 1328 280 205 167 12 chr15 97392300 97392384 -6102590 + PB1D7 SINE Alu 23 119 -1 8 1328 375 23 0 0 chr15 97392589 97392633 -6102341 + (TAG)n Simple_repeat Simple_repeat 1 44 0 8 1328 247 203 65 48 chr15 97392769 97392831 -6102143 - L1VL2 LINE L1 -5825 510 448 8 1328 341 292 147 59 chr15 97392860 97393064 -6101910 + RLTR14 LTR ERV1 161 382 0 8 1328 4133 111 39 55 chr15 97393452 97394215 -6100759 + RMER17A LTR ERVK 1 751 0 8 1328 281 273 104 71 chr15 97394436 97394585 -6100389 - MLT1A1 LTR MaLR -2 406 207 8 1328 213 94 0 0 chr15 97394622 97394654 -6100320 + (GGA)n Simple_repeat Simple_repeat 3 34 0 8 1328 271 222 14 0 chr15 97394777 97394849 -6100125 + B3A SINE B2 1 73 -125 8 1328 583 348 30 30 chr15 97395738 97396005 -6098969 - B4A SINE B4 -22 270 4 8 1328 535 279 54 38 chr15 97396086 97396272 -6098702 - ID_B1 SINE B4 -35 189 1 8 1328 471 316 86 50 chr15 97396513 97396793 -6098181 + B4 SINE B4 3 292 0 8 1328 1126 50 20 27 chr15 97396796 97397501 -6097473 + (CA)n Simple_repeat Simple_repeat 1 699 0 8 1328 1022 67 18 12 chr15 97397556 97397722 -6097252 + (TAGA)n Simple_repeat Simple_repeat 2 168 0 8 1328 1428 69 5 26 chr15 97398882 97399075 -6095899 + B2_Mm2 SINE B2 1 189 -6 8 1328 1722 215 80 6 chr15 97399092 97399473 -6095501 + MTD LTR MaLR 1 399 -20 8 1328 689 337 10 97 chr15 97399778 97400077 -6094897 + B4A SINE B4 19 291 -1 8 1328 315 171 0 0 chr15 97400078 97400154 -6094820 + (CA)n Simple_repeat Simple_repeat 1 76 0 8 1328 342 157 0 0 chr15 97400156 97400239 -6094735 + CT-rich Low_complexity Low_complexity 1 83 0 8 1328 351 0 0 0 chr15 97400628 97400667 -6094307 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 1328 279 71 0 0 chr15 97401342 97401384 -6093590 + (ATTG)n Simple_repeat Simple_repeat 4 45 0 8 1328 367 228 15 59 chr15 97401685 97401820 -6093154 - L1MEc LINE L1 -4074 2757 2629 8 1328 365 277 92 28 chr15 97401850 97401991 -6092983 - L1MEc LINE L1 -4200 2525 2376 8 1328 227 298 124 49 chr15 97402069 97402218 -6092756 - L1MEc LINE L1 -4907 1818 1663 8 1328 318 50 0 0 chr15 97402218 97402258 -6092716 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 1328 251 233 108 45 chr15 97402258 97402394 -6092580 - L1MEc LINE L1 -5063 1662 1463 8 1328 815 264 142 54 chr15 97402893 97403322 -6091652 - L1MEc LINE L1 -5335 1390 924 8 1328 400 286 127 9 chr15 97403456 97403668 -6091306 - L1MEc LINE L1 -6097 628 392 8 1328 274 287 41 57 chr15 97404030 97404152 -6090822 - MLT1K LTR MaLR -22 573 454 8 1328 206 105 0 26 chr15 97404152 97404191 -6090783 + (TCC)n Simple_repeat Simple_repeat 2 39 0 8 1328 442 234 6 99 chr15 97404416 97404577 -6090397 + MTEb LTR MaLR 1 146 -233 8 1328 1161 110 12 0 chr15 97405073 97405237 -6089737 + B2_Mm2 SINE B2 2 167 -28 8 1328 369 0 0 0 chr15 97405242 97405283 -6089691 + (GA)n Simple_repeat Simple_repeat 2 42 0 8 1328 493 293 21 21 chr15 97405350 97405493 -6089481 + B3A SINE B2 7 149 -49 8 1328 225 281 40 176 chr15 97405552 97405751 -6089223 + ORR1E LTR MaLR 26 197 -162 8 1328 197 33 33 0 chr15 97406308 97406338 -6088636 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 1328 1128 88 0 0 chr15 97406338 97406478 -6088496 - B1_Mus1 SINE Alu -7 141 2 8 1328 396 0 0 0 chr15 97406869 97406913 -6088061 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 1328 429 151 46 11 chr15 97407006 97407093 -6087881 + PB1D10 SINE Alu 27 116 -1 8 1328 201 147 0 0 chr15 97407126 97407160 -6087814 + (GAA)n Simple_repeat Simple_repeat 2 35 0 8 1328 261 171 0 0 chr15 97407359 97407400 -6087574 + L1MC5 LINE L1 7757 7797 -164 8 1328 1404 79 26 0 chr15 97408053 97408242 -6086732 + B2_Mm2 SINE B2 2 195 0 8 1328 184 311 0 0 chr15 97409715 97409760 -6085214 + MIR SINE MIR 76 120 -142 8 1328 1919 187 39 0 chr15 97409947 97410311 -6084663 - ORR1C1 LTR MaLR 0 378 1 8 1328 671 124 9 0 chr15 97410674 97410787 -6084187 + (TGG)n Simple_repeat Simple_repeat 3 116 0 8 1328 250 326 43 0 chr15 97410794 97410886 -6084088 - MIRb SINE MIR -113 155 60 8 1328 517 121 9 108 chr15 97410977 97411088 -6083886 - RLTR9A LTR ERVK -268 100 1 8 1328 1401 188 76 73 chr15 97411517 97411678 -6083296 + MTD LTR MaLR 41 203 -216 8 1328 1122 93 0 0 chr15 97411678 97411818 -6083156 + B1_Mus1 SINE Alu 2 141 -7 8 1328 267 31 0 0 chr15 97411822 97411854 -6083120 + (GGA)n Simple_repeat Simple_repeat 3 34 0 8 1328 1401 188 76 73 chr15 97411854 97412043 -6082931 + MTD LTR MaLR 204 397 -22 8 1328 251 72 0 23 chr15 97412043 97412086 -6082888 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 8 1328 268 200 149 50 chr15 97412086 97412106 -6082868 + ORR1E LTR MaLR 341 356 -3 8 1328 345 225 0 14 chr15 97412106 97412170 -6082804 - LTR33B LTR ERVL -401 102 40 8 1328 396 0 0 0 chr15 97412941 97412985 -6081989 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1328 279 0 0 0 chr15 97413914 97413945 -6081029 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 1328 1133 78 0 0 chr15 97413947 97414088 -6080886 - B1_Mus1 SINE Alu -6 142 2 8 1328 1468 88 5 0 chr15 97414705 97414897 -6080077 - B2_Mm1a SINE B2 0 193 1 8 1328 693 0 0 0 chr15 97414906 97414983 -6079991 + (TC)n Simple_repeat Simple_repeat 2 78 0 8 1328 1189 54 0 0 chr15 97414983 97415130 -6079844 - B1_Mm SINE Alu 0 147 1 8 1328 1751 180 120 152 chr15 97415331 97415889 -6079085 + RMER19C LTR ERVK 72 611 0 8 1328 242 236 55 14 chr15 97416227 97416300 -6078674 - ID SINE ID -147 77 2 9 1328 232 250 0 0 chr15 97416660 97416716 -6078258 + Lx8 LINE L1 7416 7471 -2 9 1328 652 273 165 28 chr15 97416742 97417141 -6077833 - L1MA4A LINE L1 -373 5930 5477 9 1328 2116 164 72 92 chr15 97417135 97417532 -6077442 - L1_Mur3 LINE L1 -3260 2620 2249 9 1328 1439 48 16 36 chr15 97417532 97417725 -6077249 - B2_Mm2 SINE B2 -6 189 1 9 1328 2116 164 72 92 chr15 97417725 97417838 -6077136 - L1_Mur3 LINE L1 -3632 2248 2120 9 1328 771 192 103 0 chr15 97417838 97417984 -6076990 + 7SLRNA srpRNA srpRNA 5 165 -149 9 1328 183 49 0 68 chr15 97418331 97418375 -6076599 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 9 1328 235 241 62 25 chr15 97418491 97418572 -6076402 + RLTR14 LTR ERV1 299 382 0 9 1328 388 239 0 33 chr15 97418807 97418898 -6076076 + PB1D10 SINE Alu 28 115 -2 9 1328 25 0 0 0 chr15 97419461 97419486 -6075488 + AT_rich Low_complexity Low_complexity 1 25 0 9 1328 316 302 84 25 chr15 97419935 97420054 -6074920 + MIRb SINE MIR 26 151 -117 9 1328 724 205 43 115 chr15 97420059 97420268 -6074706 + B3A SINE B2 1 194 -4 9 1328 306 400 54 31 chr15 97420508 97420730 -6074244 + L1M5 LINE L1 5600 5826 -298 9 1328 213 139 0 0 chr15 97422444 97422487 -6072487 + (A)n Simple_repeat Simple_repeat 1 43 0 9 1328 1055 147 35 148 chr15 97423751 97424007 -6070967 + RMER10B LTR ERVL 172 398 0 9 1328 1907 128 61 23 chr15 97425542 97425934 -6069040 - RMER17C LTR ERVK -3 407 1 9 1328 352 273 243 6 chr15 97426048 97426221 -6068753 - ID_B1 SINE B4 -5 219 6 9 1328 1678 208 14 27 chr15 97426301 97426545 -6068429 - RMER5 LTR ERV1 -7 527 287 9 1328 3271 109 43 95 chr15 97426545 97427143 -6067831 - RMER2 LTR ERV1 0 567 1 9 1328 1678 208 14 27 chr15 97427143 97427264 -6067710 - RMER5 LTR ERV1 -248 286 167 9 1328 1082 193 9 42 chr15 97427260 97427476 -6067498 - RMER5 LTR ERV1 -313 221 13 9 1328 1490 157 105 56 chr15 97427751 97427772 -6067202 - RMER17C LTR ERVK 0 410 390 9 1328 414 0 0 0 chr15 97427772 97427818 -6067156 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 9 1328 1490 157 105 56 chr15 97427818 97428187 -6066787 - RMER17C LTR ERVK -21 389 3 9 1328 195 42 0 0 chr15 97429514 97429538 -6065436 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 9 1328 2173 165 21 24 chr15 97429538 97429959 -6065015 - RMER10A LTR ERVL -22 420 1 9 1328 1416 65 21 0 chr15 97430020 97430206 -6064768 - B2_Mm1t SINE B2 0 193 4 9 1328 603 102 0 0 chr15 97430209 97430297 -6064677 + (TTTC)n Simple_repeat Simple_repeat 1 88 0 9 1328 327 239 222 0 chr15 97430645 97430762 -6064212 + B1F SINE Alu 1 143 -6 9 1328 363 223 194 0 chr15 97430662 97430765 -6064209 + ID_B1 SINE B4 99 221 -3 9 1328 1204 256 70 31 chr15 97431037 97431364 -6063610 - MTD LTR MaLR -47 372 33 9 1328 200 195 49 0 chr15 97431428 97431469 -6063505 - L2 LINE L2 -577 2842 2800 9 1328 1521 214 34 6 chr15 97431510 97431830 -6063144 + MT2A LTR ERVL 205 533 0 9 1328 2844 235 28 59 chr15 97431835 97432266 -6062708 + MTC-int LTR MaLR 21 444 -814 9 1328 1170 22 0 0 chr15 97432266 97432403 -6062571 + (CA)n Simple_repeat Simple_repeat 1 137 0 9 1328 2844 235 28 59 chr15 97432403 97432716 -6062258 + MTC-int LTR MaLR 445 741 -517 9 1328 263 282 70 12 chr15 97432803 97432889 -6062085 + MLT1A1 LTR MaLR 318 408 0 9 1328 520 249 201 49 chr15 97432889 97433128 -6061846 - L1M4 LINE L1 -1865 4281 4009 9 1328 2528 62 6 58 chr15 97433128 97433473 -6061501 - ORR1A2 LTR MaLR 0 327 1 9 1328 520 249 201 49 chr15 97433473 97433537 -6061437 - L1M4 LINE L1 -2138 4008 3932 9 1328 686 298 42 108 chr15 97433582 97433868 -6061106 + B4A SINE B4 1 267 -25 9 1328 234 326 120 30 chr15 97433878 97434011 -6060963 - MLT1B LTR MaLR -72 477 333 9 1328 580 157 0 38 chr15 97435162 97435268 -6059706 + B1_Mur3 SINE Alu 40 141 -8 9 1328 225 65 0 0 chr15 97435268 97435299 -6059675 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 9 1328 210 71 0 0 chr15 97435299 97435327 -6059647 + (GGA)n Simple_repeat Simple_repeat 3 30 0 9 1328 689 250 109 38 chr15 97435504 97435770 -6059204 - MLT1B LTR MaLR -29 361 77 9 1328 804 275 41 15 chr15 97435770 97435966 -6059008 + B3 SINE B2 3 203 -13 9 1328 239 284 119 0 chr15 97436602 97436669 -6058305 + B4A SINE B4 1 75 -217 9 1328 632 243 21 14 chr15 97436702 97436844 -6058130 + B4A SINE B4 149 291 -1 9 1328 1187 174 5 0 chr15 97438791 97438987 -6055987 + B3 SINE B2 8 204 -12 9 1328 443 302 119 10 chr15 97439227 97439421 -6055553 - MLT1H LTR MaLR 0 549 335 9 1328 2553 38 47 0 chr15 97439362 97439680 -6055294 + IAPEY_LTR LTR ERVK 53 385 0 9 1328 319 231 22 15 chr15 97439867 97440003 -6054971 + GA-rich Low_complexity Low_complexity 4 140 0 9 1328 207 329 42 120 chr15 97440256 97440515 -6054459 - L4 LINE RTE 0 2029 1791 9 1328 1294 87 35 0 chr15 97440516 97440688 -6054286 + B2_Mm2 SINE B2 4 181 -14 9 1328 1146 70 0 14 chr15 97440695 97440840 -6054134 - B1_Mus2 SINE Alu 0 147 5 9 1328 25 31 0 0 chr15 97440840 97440872 -6054102 + AT_rich Low_complexity Low_complexity 1 32 0 9 1328 3012 53 47 13 chr15 97440884 97441268 -6053706 - MTB LTR MaLR -3 397 1 9 1328 1274 79 0 82 chr15 97442648 97442842 -6052132 + B2_Mm2 SINE B2 3 180 -15 9 1328 873 116 93 47 chr15 97442844 97443016 -6051958 + B2_Mm2 SINE B2 2 181 -14 9 1328 180 0 0 0 chr15 97443248 97443268 -6051706 + (TGGGGG)n Simple_repeat Simple_repeat 5 24 0 9 1328 432 284 61 71 chr15 97443415 97443627 -6051347 + Charlie7 DNA MER1_type 445 654 -1958 9 1328 270 115 16 32 chr15 97443745 97443808 -6051166 + GA-rich Low_complexity Low_complexity 5 66 0 9 1328 298 309 45 9 chr15 97443885 97443996 -6050978 - MLT1A1 LTR MaLR -266 142 28 9 1328 1623 153 75 31 chr15 97444249 97444633 -6050341 + RMER17C LTR ERVK 1 401 -9 9 1328 322 296 37 9 chr15 97444641 97444750 -6050224 - ID_B1 SINE B4 -20 204 93 9 1328 1540 125 350 30 chr15 97445529 97445866 -6049108 - RLTR41 LTR ERV1 -1 445 1 9 1328 601 276 135 10 chr15 97445997 97446246 -6048728 - MuRRS4-int LTR ERV1 -230 4833 4594 9 1328 1209 50 0 0 chr15 97446246 97446387 -6048587 - B1_Mus1 SINE Alu -5 143 3 9 1328 601 283 88 41 chr15 97446387 97446567 -6048407 - MuRRS4-int LTR ERV1 -470 4593 4545 9 1328 337 320 16 8 chr15 97446754 97446880 -6048094 - MMERGLN-int LTR ERV1 -2016 5540 5414 9 1328 1821 240 70 18 chr15 97447019 97447477 -6047497 - MuRRS4-int LTR ERV1 -1049 4014 3533 9 1328 384 116 63 0 chr15 97447560 97447655 -6047319 + (TA)n Simple_repeat Simple_repeat 2 102 0 9 1328 620 278 65 80 chr15 97447665 97448079 -6046895 - RLTR4_MM-int LTR ERV1 -3207 4394 3987 9 1328 356 190 0 60 chr15 97448182 97448462 -6046512 + GA-rich Low_complexity Low_complexity 1 263 0 9 1328 252 357 14 14 chr15 97448483 97448625 -6046349 - RLTR4_MM-int LTR ERV1 -4212 3344 3203 9 1328 316 197 0 15 chr15 97448635 97448702 -6046272 - RLTR14-int LTR ERV1 -3810 1507 1442 9 1328 370 319 50 13 chr15 97448799 97448958 -6046016 - RLTR6-int LTR ERV1 -6069 1709 1545 9 1328 274 284 31 31 chr15 97449597 97449695 -6045279 - RLTR6-int LTR ERV1 -6856 700 603 9 1328 348 111 238 0 chr15 97450162 97450225 -6044749 + RLTR23 LTR ERV1 20 97 -333 9 1328 209 33 0 32 chr15 97450229 97450260 -6044714 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 9 1328 303 256 63 53 chr15 97450346 97450441 -6044533 + PB1D7 SINE Alu 18 113 -7 9 1328 462 269 0 1 chr15 97451367 97451470 -6043504 - B1F1 SINE Alu -4 116 15 9 1328 633 234 3 0 chr15 97451482 97451784 -6043190 + (TG)n Simple_repeat Simple_repeat 1 302 0 9 1328 734 208 0 11 chr15 97451809 97451989 -6042985 + (TATG)n Simple_repeat Simple_repeat 1 178 0 9 1328 213 194 0 0 chr15 97451989 97452025 -6042949 + (TG)n Simple_repeat Simple_repeat 1 36 0 9 1328 1230 61 0 0 chr15 97452498 97452645 -6042329 + B1_Mus2 SINE Alu 1 147 0 9 1328 273 98 0 0 chr15 97452648 97452689 -6042285 + (A)n Simple_repeat Simple_repeat 1 41 0 9 1328 506 297 8 8 chr15 97453576 97453695 -6041279 + B1F2 SINE Alu 2 120 -29 9 1328 235 338 0 0 chr15 97453840 97453911 -6041063 + (TG)n Simple_repeat Simple_repeat 1 71 0 9 1328 288 243 122 0 chr15 97453959 97454033 -6040941 - Lx9 LINE L1 -249 7395 7313 9 1328 898 241 136 16 chr15 97454434 97454691 -6040283 + MTD LTR MaLR 132 419 0 9 1328 3022 41 6 0 chr15 97455408 97455770 -6039204 + L1Md_F2 LINE L1 6201 6564 -18 9 1328 447 19 0 0 chr15 97455770 97455822 -6039152 + (GA)n Simple_repeat Simple_repeat 2 53 0 9 1328 625 244 53 0 chr15 97455822 97456003 -6038971 + ORR1D2 LTR MaLR 1 207 -152 9 1328 3174 45 24 0 chr15 97456027 97456403 -6038571 + IAPEY_LTR LTR ERVK 1 385 0 9 1328 59505 65 5 6 chr15 97456403 97463926 -6031048 + IAPEy-int LTR ERVK 1 7513 0 9 1328 2643 49 12 3 chr15 97463926 97464254 -6030720 + IAPEY_LTR LTR ERVK 55 385 0 9 1328 495 0 0 0 chr15 97464413 97464468 -6030506 + (GA)n Simple_repeat Simple_repeat 2 56 0 9 1328 402 302 59 44 chr15 97464610 97464745 -6030229 + RSINE1 SINE B4 25 161 -4 9 1328 1239 128 11 6 chr15 97465005 97465186 -6029788 + URR1B DNA MER1_type 1 182 -43 9 1328 2050 217 98 40 chr15 97466324 97466872 -6028102 + Lx9 LINE L1 6120 6699 -945 9 1328 613 230 187 13 chr15 97466924 97467195 -6027779 + MTE2b LTR MaLR 1 369 -10 9 1328 1802 128 11 4 chr15 97468280 97468554 -6026420 - ORR1B2 LTR MaLR 0 367 92 9 1328 1488 189 31 3 chr15 97469070 97469357 -6025617 + Lx9 LINE L1 7162 7456 -188 9 1328 881 118 134 17 chr15 97470041 97470213 -6024761 - URR1A DNA MER1_type 0 226 35 9 1328 2229 117 63 17 chr15 97470209 97470556 -6024418 + ORR1B1 LTR MaLR 24 386 -8 9 1328 234 0 0 0 chr15 97470879 97470905 -6024069 + (TTG)n Simple_repeat Simple_repeat 1 26 0 9 1328 1292 246 56 28 chr15 97470965 97471287 -6023687 + Lx5 LINE L1 6719 7049 -1 9 1328 198 421 24 24 chr15 97471781 97471905 -6023069 + L2c LINE L2 3029 3152 -235 9 1328 225 132 0 0 chr15 97471963 97472001 -6022973 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 1328 182 250 52 65 chr15 97472432 97472509 -6022465 - MIR SINE MIR -167 95 20 9 1328 230 267 99 55 chr15 97473525 97473616 -6021358 - MLT1A1 LTR MaLR 0 408 314 1 1328 738 260 45 5 chr15 97474159 97474360 -6020614 - RMER15-int LTR ERVL -3326 1673 1465 1 1328 464 0 18 0 chr15 97474368 97474424 -6020550 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1328 315 0 0 0 chr15 97474424 97474458 -6020516 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1328 2998 152 83 8 chr15 97474536 97475054 -6019920 - RMER15 LTR ERVL -18 557 1 1 1328 243 310 103 0 chr15 97475055 97475142 -6019832 - MLT1A1-int LTR MaLR -1271 100 5 1 1328 1704 166 92 12 chr15 97475193 97475529 -6019445 - ORR1D1 LTR MaLR 0 374 12 1 1328 319 303 73 0 chr15 97477529 97477694 -6017280 + (CTAA)n Simple_repeat Simple_repeat 3 179 0 1 1328 222 319 52 21 chr15 97477792 97477888 -6017086 - MIR SINE MIR -5 257 159 1 1328 198 0 0 0 chr15 97477889 97477911 -6017063 + (CCA)n Simple_repeat Simple_repeat 2 23 0 1 1328 260 340 53 11 chr15 97478124 97478219 -6016755 - MIRb SINE MIR -75 193 95 1 1328 2303 140 26 16 chr15 97478233 97478611 -6016363 - RLTR14 LTR ERV1 0 382 1 1 1328 234 289 0 0 chr15 97478916 97478968 -6016006 + C-rich Low_complexity Low_complexity 3 54 0 1 1328 287 290 84 0 chr15 97479386 97479493 -6015481 - MamGypLTR1c LTR Gypsy -3 800 685 1 1328 463 229 49 67 chr15 97479692 97479926 -6015048 + LTRIS5 LTR ERV1 238 439 -8 1 1328 240 35 0 0 chr15 97480558 97480587 -6014387 + (GGGTG)n Simple_repeat Simple_repeat 3 31 0 1 1328 1483 279 93 53 chr15 97480624 97481139 -6013835 + L1M2 LINE L1 3141 3684 -2459 1 1328 1338 85 28 0 chr15 97481139 97481315 -6013659 + B2_Mm2 SINE B2 1 181 -14 1 1328 1483 282 87 70 chr15 97481315 97481955 -6013019 + L1M2 LINE L1 3654 4256 -1624 1 1328 1123 253 57 10 chr15 97481952 97482248 -6012726 + Lx7 LINE L1 1912 2221 -3659 1 1328 1537 198 159 116 chr15 97482248 97482283 -6012691 - MT2A LTR ERVL -2 531 486 1 1328 414 0 0 0 chr15 97482283 97482329 -6012645 + (GA)n Simple_repeat Simple_repeat 2 47 0 1 1328 1537 198 159 116 chr15 97482329 97482709 -6012265 - MT2A LTR ERVL -48 485 75 1 1328 524 55 0 0 chr15 97482709 97482782 -6012192 + L1_Mus2 LINE L1 6494 6566 0 1 1328 1537 198 159 116 chr15 97482782 97482798 -6012176 - MT2A LTR ERVL -459 74 70 1 1328 702 35 0 0 chr15 97482798 97482883 -6012091 + (GGAA)n Simple_repeat Simple_repeat 4 88 0 1 1328 1537 198 159 116 chr15 97482883 97482958 -6012016 - MT2A LTR ERVL -464 69 2 1 1328 6982 194 29 59 chr15 97482960 97484300 -6010674 + Lx7 LINE L1 2217 3520 -2360 1 1328 573 15 0 0 chr15 97484300 97484366 -6010608 + (TTCC)n Simple_repeat Simple_repeat 4 69 0 1 1328 1124 86 0 6 chr15 97484369 97484532 -6010442 + (TTTC)n Simple_repeat Simple_repeat 4 165 0 1 1328 1415 35 65 0 chr15 97484534 97484703 -6010271 - B2_Mm2 SINE B2 -14 181 2 1 1328 6982 194 29 59 chr15 97484703 97485180 -6009794 + Lx7 LINE L1 3521 3987 -1893 1 1328 1731 222 51 25 chr15 97485177 97485823 -6009151 + Lx7 LINE L1 5529 6218 -1255 1 1328 340 156 4 23 chr15 97485823 97485904 -6009070 - RMER19B LTR ERVK 0 902 847 1 1328 1848 247 56 32 chr15 97485907 97486405 -6008569 + Lx7 LINE L1 6822 7331 -365 1 1328 180 111 0 0 chr15 97486447 97486474 -6008500 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1328 180 0 0 0 chr15 97486545 97486565 -6008409 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1 1328 203 291 25 12 chr15 97486570 97486650 -6008324 + GA-rich Low_complexity Low_complexity 4 84 0 1 1328 1863 285 46 73 chr15 97486682 97486929 -6008045 + L1M2 LINE L1 4400 4634 -1509 1 1328 1143 42 35 0 chr15 97486929 97487072 -6007902 + B1_Mus1 SINE Alu 1 148 0 1 1328 1863 265 57 59 chr15 97487072 97487894 -6007080 + L1M2 LINE L1 4635 5448 -676 1 1328 1708 178 95 55 chr15 97489415 97489787 -6005187 - MTD LTR MaLR -15 404 20 1 1328 351 0 0 0 chr15 97489787 97489826 -6005148 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1328 1708 176 98 57 chr15 97489826 97489852 -6005122 - MTD LTR MaLR -400 19 3 1 1328 261 0 0 0 chr15 97489924 97489953 -6005021 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1 1328 186 314 169 24 chr15 97490076 97490200 -6004774 - L2b LINE L2 -1 3374 3233 1 1328 191 366 10 19 chr15 97491323 97491426 -6003548 + L2c LINE L2 3054 3155 -232 1 1328 190 338 65 0 chr15 97491573 97491650 -6003324 + L2c LINE L2 3271 3352 -23 1 1328 3384 62 0 2 chr15 97491907 97492315 -6002659 - MTB_Mm LTR MaLR 0 407 1 1 1328 668 296 12 42 chr15 97492606 97492772 -6002202 + B3A SINE B2 22 182 -16 1 1328 1033 132 26 11 chr15 97492772 97493238 -6001736 + (CATA)n Simple_repeat Simple_repeat 1 473 0 1 1328 209 182 0 0 chr15 97493239 97493272 -6001702 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1328 1056 106 0 32 chr15 97493274 97493460 -6001514 + (CATA)n Simple_repeat Simple_repeat 1 180 0 1 1328 41 36 0 0 chr15 97493480 97493535 -6001439 + AT_rich Low_complexity Low_complexity 1 55 0 1 1328 821 113 37 22 chr15 97493586 97493722 -6001252 - B1_Mus2 SINE Alu -3 144 7 1 1328 368 217 46 77 chr15 97493607 97493737 -6001237 - MT2B LTR ERVL -323 278 153 1 1328 432 0 0 0 chr15 97493896 97493944 -6001030 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 1328 422 260 71 24 chr15 97494193 97494319 -6000655 - MLT1A0 LTR MaLR -86 279 148 1 1328 615 253 220 34 chr15 97494337 97494632 -6000342 - ORR1E LTR MaLR -9 350 1 1 1328 825 177 14 0 chr15 97494943 97495084 -5999890 + B1_Mur2 SINE Alu 2 144 -5 1 1328 234 193 0 0 chr15 97495084 97495141 -5999833 + GA-rich Low_complexity Low_complexity 1 57 0 1 1328 1004 60 113 0 chr15 97495181 97495314 -5999660 + B1_Mus1 SINE Alu 1 148 0 1 1328 350 269 82 25 chr15 97495360 97495482 -5999492 + L1MDa LINE L1 137 265 -6368 1 1328 240 265 58 48 chr15 97495538 97495641 -5999333 + L1MDa LINE L1 1811 1914 -4719 1 1328 361 194 0 0 chr15 97496554 97496621 -5998353 - B1_Mus1 SINE Alu -77 71 5 1 1328 458 191 24 0 chr15 97497274 97497358 -5997616 + MT2A LTR ERVL 3 88 -445 1 1328 1213 128 0 26 chr15 97497338 97497374 -5997600 - B2_Mm2 SINE B2 -6 189 158 1 1328 387 0 0 0 chr15 97497374 97497417 -5997557 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 1 1328 1213 128 0 26 chr15 97497417 97497573 -5997401 - B2_Mm2 SINE B2 -38 157 2 1 1328 1058 196 174 0 chr15 97497573 97497794 -5997180 + MT2A LTR ERVL 74 333 -200 1 1328 2018 99 59 7 chr15 97498860 97499166 -5995808 - RLTRETN_Mm LTR ERVK 0 322 1 1 1328 1237 94 0 14 chr15 97499297 97499651 -5995323 + (TCTCC)n Simple_repeat Simple_repeat 1 349 0 1 1328 456 104 0 0 chr15 97499651 97499718 -5995256 + (TCCCC)n Simple_repeat Simple_repeat 1 67 0 1 1328 229 331 170 52 chr15 97499718 97499871 -5995103 - MLT1B LTR MaLR -215 175 5 1 1328 293 203 125 7 chr15 97500022 97500112 -5994862 - MTC-int LTR MaLR -1003 95 3 1 1328 2158 159 99 3 chr15 97500112 97500496 -5994478 - MTC LTR MaLR 0 421 1 1 1328 726 234 40 23 chr15 97501118 97501293 -5993681 - MTE2a LTR MaLR -200 179 2 2 1328 298 272 123 25 chr15 97501360 97501388 -5993586 - B2_Mm1a SINE B2 -14 179 153 3 1328 407 19 19 0 chr15 97501388 97501440 -5993534 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1328 763 151 8 16 chr15 97501445 97501573 -5993401 - RSINE1 SINE B4 -36 129 3 5 1328 230 257 26 39 chr15 97503173 97503250 -5991724 + RLTR20B3 LTR ERVK 56 131 -446 6 1328 216 0 0 0 chr15 97503726 97503750 -5991224 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1328 248 273 51 13 chr15 97503846 97503924 -5991050 + B1F2 SINE Alu 1 81 -68 8 1328 2060 114 38 3 chr15 97504601 97504917 -5990057 + ORR1A4 LTR MaLR 1 327 -2 9 1328 252 0 0 0 chr15 97505985 97506013 -5988961 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1 1328 555 162 0 93 chr15 97506014 97506143 -5988831 - B1_Mus2 SINE Alu -30 117 1 1 1328 330 262 17 78 chr15 97506755 97506871 -5988103 + RSINE1 SINE B4 16 124 -41 1 1328 270 0 0 0 chr15 97506871 97506901 -5988073 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1328 387 312 75 13 chr15 97507072 97507231 -5987743 + ID_B1 SINE B4 56 224 0 1 1328 394 225 231 8 chr15 97507446 97507567 -5987407 + B1F1 SINE Alu 1 148 -1 1 1328 244 300 57 0 chr15 97507572 97507642 -5987332 + B3A SINE B2 43 116 -82 1 1328 2218 114 15 9 chr15 97507833 97508160 -5986814 + ORR1A4 LTR MaLR 1 329 0 1 1328 1351 88 16 21 chr15 97509249 97509435 -5985539 + B2_Mm2 SINE B2 5 189 -6 1 1328 416 247 103 7 chr15 97509773 97509881 -5985093 + B3A SINE B2 13 134 -64 1 1328 1013 72 0 53 chr15 97509881 97510071 -5984903 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1328 416 247 103 7 chr15 97510071 97510117 -5984857 + B3A SINE B2 135 182 -16 1 1328 386 279 42 63 chr15 97510139 97510330 -5984644 + HAL1-3A_ME LINE L1 1975 2161 -697 2 1328 286 292 81 24 chr15 97512947 97513070 -5981904 - B4 SINE B4 -159 133 4 2 1328 584 233 42 0 chr15 97513136 97513256 -5981718 - RSINE1 SINE B4 -37 128 4 2 1328 418 252 92 0 chr15 97514632 97514751 -5980223 - ID_B1 SINE B4 -9 215 86 2 1328 597 238 24 8 chr15 97514980 97515107 -5979867 + B1_Mur3 SINE Alu 1 129 -20 2 1328 860 8 34 0 chr15 97515126 97515243 -5979731 + (TC)n Simple_repeat Simple_repeat 1 121 0 2 1328 515 269 69 8 chr15 97515257 97515388 -5979586 + RSINE1 SINE B4 25 163 -2 2 1328 331 236 10 61 chr15 97515518 97515617 -5979357 + PB1D10 SINE Alu 19 112 -5 2 1328 1273 240 60 9 chr15 97515973 97516309 -5978665 - MTD LTR MaLR 0 419 67 2 1328 363 60 0 0 chr15 97516496 97516546 -5978428 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1328 368 214 197 0 chr15 97516563 97516680 -5978294 + B1_Mm SINE Alu 1 140 -7 3 1328 518 196 130 26 chr15 97517054 97517169 -5977805 + RSINE1 SINE B4 2 128 -37 3 1328 245 280 9 130 chr15 97517109 97517224 -5977750 - B1_Mm SINE Alu -45 102 2 3 20 421 262 144 54 chr15 97517541 97517763 -5977211 - B4A SINE B4 -8 284 43 3 1329 416 324 81 0 chr15 97518031 97518167 -5976807 + RSINE1 SINE B4 9 155 -10 3 1329 275 262 91 116 chr15 97518794 97519027 -5975947 + B4A SINE B4 9 292 0 3 1329 1199 56 0 0 chr15 97519264 97519406 -5975568 + B1_Mus1 SINE Alu 1 142 -6 3 1329 234 270 40 13 chr15 97519472 97519547 -5975427 + ID2 SINE ID 4 80 -3 3 1329 473 136 23 0 chr15 97519548 97519636 -5975338 + G-rich Low_complexity Low_complexity 1 90 0 3 1329 414 310 62 8 chr15 97519714 97519844 -5975130 - ID_B1 SINE B4 -6 218 82 4 1329 1095 84 14 0 chr15 97519920 97520062 -5974912 - B1_Mus2 SINE Alu -2 145 2 4 1329 951 179 104 30 chr15 97520089 97520130 -5974844 - B3 SINE B2 0 216 176 4 1329 3619 69 28 0 chr15 97520130 97520592 -5974382 + MT2C_Mm LTR ERVL 1 475 0 4 1329 951 179 104 30 chr15 97520592 97520751 -5974223 - B3 SINE B2 -41 175 1 4 1329 244 233 152 76 chr15 97520855 97520934 -5974040 + B3A SINE B2 1 85 -113 4 1329 189 171 0 0 chr15 97520942 97520977 -5973997 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 1329 831 157 64 7 chr15 97521046 97521187 -5973787 - B1_Mur3 SINE Alu 0 149 1 4 1329 184 306 32 0 chr15 97521986 97522048 -5972926 - L2a LINE L2 0 3426 3363 4 1329 342 205 195 9 chr15 97522351 97522464 -5972510 - B1F SINE Alu -5 144 11 4 1329 180 0 0 0 chr15 97522575 97522595 -5972379 + (CG)n Simple_repeat Simple_repeat 2 21 0 4 1329 576 0 0 0 chr15 97522595 97522658 -5972316 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 1329 581 251 41 33 chr15 97522683 97522855 -5972119 + B3A SINE B2 2 179 -37 5 1329 23 0 0 0 chr15 97522980 97523003 -5971971 + AT_rich Low_complexity Low_complexity 1 23 0 5 1329 371 255 29 23 chr15 97523241 97523338 -5971636 + B1F SINE Alu 17 119 -1 5 1329 924 219 99 0 chr15 97523353 97523545 -5971429 + B3 SINE B2 1 211 -5 5 1329 238 294 110 58 chr15 97524042 97524197 -5970777 - LTR79 LTR ERVL -362 165 3 5 1329 294 271 163 0 chr15 97524239 97524368 -5970606 + RSINE1 SINE B4 16 165 0 5 1329 206 252 52 9 chr15 97524794 97524910 -5970064 + (CTATA)n Simple_repeat Simple_repeat 2 122 0 5 1329 791 178 0 70 chr15 97524944 97525101 -5969873 - B1_Mur1 SINE Alu -2 147 2 5 1329 226 273 108 29 chr15 97525185 97525287 -5969687 + RLTR25B LTR ERVK 403 512 -516 5 1329 657 138 55 9 chr15 97525208 97525318 -5969656 + B1_Mus2 SINE Alu 32 146 -1 6 1329 504 0 0 0 chr15 97525361 97525417 -5969557 + (GGAGA)n Simple_repeat Simple_repeat 1 56 0 6 1329 345 241 26 61 chr15 97525626 97525741 -5969233 - PB1D10 SINE Alu -1 116 6 6 1329 695 194 72 0 chr15 97525810 97525949 -5969025 + B1_Mur1 SINE Alu 1 149 0 6 1329 203 133 22 0 chr15 97525950 97525995 -5968979 + A-rich Low_complexity Low_complexity 2 47 0 6 1329 189 74 0 0 chr15 97526286 97526313 -5968661 + (TCTCCC)n Simple_repeat Simple_repeat 2 28 0 6 1329 330 225 288 0 chr15 97526618 97526729 -5968245 + B1_Mur1 SINE Alu 1 143 -6 6 1329 831 144 0 0 chr15 97526729 97526868 -5968106 + (GAAA)n Simple_repeat Simple_repeat 1 139 0 6 1329 264 59 0 0 chr15 97527570 97527604 -5967370 + (CAGA)n Simple_repeat Simple_repeat 2 35 0 6 1329 278 276 13 0 chr15 97529632 97529708 -5965266 + GA-rich Low_complexity Low_complexity 1 77 0 6 1329 546 271 42 0 chr15 97529733 97529877 -5965097 - B3 SINE B2 -66 150 1 7 1329 477 281 0 0 chr15 97530359 97530455 -5964519 + B1_Mur3 SINE Alu 3 98 -51 7 1329 249 108 0 0 chr15 97530455 97530492 -5964482 + (GAAAA)n Simple_repeat Simple_repeat 5 41 0 7 1329 611 218 111 55 chr15 97530515 97530714 -5964260 + B3 SINE B2 2 211 -5 7 1329 854 215 50 11 chr15 97531006 97531185 -5963789 + MTD LTR MaLR 1 186 -233 7 1329 230 246 53 0 chr15 97531181 97531238 -5963736 + MTD LTR MaLR 360 419 0 7 1329 326 263 18 103 chr15 97531251 97531371 -5963603 + PB1D10 SINE Alu 6 115 -5 7 1329 735 129 62 131 chr15 97531749 97531838 -5963136 - B1_Mur4 SINE Alu 0 150 64 7 1329 1031 52 97 0 chr15 97531838 97531972 -5963002 + B1_Mus2 SINE Alu 1 147 0 7 1329 735 129 62 131 chr15 97531972 97532042 -5962932 - B1_Mur4 SINE Alu -87 63 2 7 1329 741 256 77 15 chr15 97532114 97532387 -5962587 + B4A SINE B4 2 291 -1 7 1329 28 29 0 0 chr15 97532705 97532740 -5962234 + AT_rich Low_complexity Low_complexity 1 35 0 7 1329 1284 41 0 0 chr15 97532937 97533084 -5961890 - B1_Mus1 SINE Alu -1 147 1 8 1329 778 177 15 30 chr15 97533128 97533262 -5961712 - B1_Mur4 SINE Alu -13 137 6 8 1329 278 211 0 0 chr15 97533268 97533320 -5961654 - ID_B1 SINE B4 -71 153 102 8 1329 27 29 0 0 chr15 97533358 97533392 -5961582 + AT_rich Low_complexity Low_complexity 1 34 0 8 1329 521 293 56 62 chr15 97533392 97533525 -5961449 + RSINE1 SINE B4 7 146 -19 8 1329 255 31 0 0 chr15 97533525 97533557 -5961417 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 1329 521 293 56 62 chr15 97533557 97533583 -5961391 + RSINE1 SINE B4 147 165 0 8 1329 286 221 56 44 chr15 97533833 97533923 -5961051 - Tigger5 DNA MER2_type 0 2406 2316 8 1329 310 244 64 85 chr15 97534351 97534445 -5960529 + RSINE1 SINE B4 63 154 -11 8 1329 1155 68 7 0 chr15 97535329 97535475 -5959499 + B1_Mus1 SINE Alu 2 148 0 8 1329 241 277 56 81 chr15 97535620 97535654 -5959320 + B4A SINE B4 69 224 -67 8 1329 601 123 71 32 chr15 97535654 97535780 -5959194 + B1_Mur3 SINE Alu 17 147 -2 9 1329 23 68 0 0 chr15 97536086 97536130 -5958844 + GC_rich Low_complexity Low_complexity 1 44 0 9 1329 195 351 26 0 chr15 97536929 97537006 -5957968 - MER5B DNA MER1_type -56 122 44 9 1329 819 211 50 143 chr15 97537161 97537203 -5957771 + B3 SINE B2 1 36 -180 9 1329 706 114 379 0 chr15 97537203 97537324 -5957650 + B2_Mm2 SINE B2 3 159 -36 9 1329 423 0 0 0 chr15 97537324 97537371 -5957603 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 9 1329 706 114 379 0 chr15 97537371 97537389 -5957585 + B2_Mm2 SINE B2 160 193 -2 9 1329 819 211 50 143 chr15 97537389 97537584 -5957390 + B3 SINE B2 37 216 0 9 1329 253 227 109 88 chr15 97537714 97537740 -5957234 - YREP_Mm Unknown Unknown -1488 324 218 9 1329 607 226 73 0 chr15 97537740 97537864 -5957110 + B1_Mur1 SINE Alu 17 149 0 9 1329 253 227 109 88 chr15 97537864 97537877 -5957097 - YREP_Mm Unknown Unknown -1488 217 154 9 1329 862 202 108 10 chr15 97537877 97538072 -5956902 + B3 SINE B2 2 215 -1 9 1329 253 227 109 88 chr15 97538072 97538101 -5956873 - YREP_Mm Unknown Unknown -1659 153 128 9 1329 231 278 18 117 chr15 97538841 97539004 -5955970 - B1F SINE Alu -2 147 1 9 1329 911 233 47 11 chr15 97539143 97539334 -5955640 - B3 SINE B2 -17 199 2 1 1329 280 309 69 128 chr15 97539337 97539426 -5955548 - MLT1J LTR MaLR -76 436 350 1 1329 1011 117 0 0 chr15 97539426 97539606 -5955368 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1329 280 309 69 128 chr15 97539606 97539720 -5955254 - MLT1J LTR MaLR -163 349 245 1 1329 1203 34 7 7 chr15 97539774 97539920 -5955054 + B1_Mus1 SINE Alu 1 146 -2 1 1329 463 278 0 53 chr15 97539936 97540050 -5954924 + B3A SINE B2 6 113 -85 1 1329 689 232 104 16 chr15 97540424 97540617 -5954357 + B3 SINE B2 2 211 -5 1 1329 684 197 28 28 chr15 97540628 97540769 -5954205 + B1_Mur2 SINE Alu 9 149 0 1 1329 243 286 67 67 chr15 97542898 97543018 -5951956 + B1F1 SINE Alu 1 120 0 1 1329 212 289 0 0 chr15 97545192 97545237 -5949737 + (CG)n Simple_repeat Simple_repeat 2 46 0 1 1329 321 26 0 0 chr15 97545237 97545275 -5949699 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1329 570 218 9 0 chr15 97545426 97545536 -5949438 - B1_Mur2 SINE Alu -2 147 37 1 1329 228 341 142 9 chr15 97546078 97546297 -5948677 - MIR SINE MIR -5 257 10 1 1329 1231 246 160 16 chr15 97546323 97546551 -5948423 + MTD LTR MaLR 5 275 -144 1 1329 199 0 0 61 chr15 97546551 97546584 -5948390 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1 1329 1231 246 160 16 chr15 97546584 97546718 -5948256 + MTD LTR MaLR 276 419 0 1 1329 617 186 17 11 chr15 97546794 97546968 -5948006 + (CATA)n Simple_repeat Simple_repeat 4 178 0 1 1329 228 118 0 0 chr15 97546969 97547003 -5947971 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1329 324 267 126 56 chr15 97547005 97547219 -5947755 - L2 LINE L2 -854 2565 2337 1 1329 242 316 103 17 chr15 97547466 97547582 -5947392 - MLT1A1 LTR MaLR -14 394 269 1 1329 216 0 0 0 chr15 97547713 97547737 -5947237 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 1329 890 125 0 0 chr15 97547748 97547876 -5947098 - B1_Mur3 SINE Alu -13 136 9 1 1329 863 148 19 0 chr15 97548264 97548419 -5946555 + URR1B DNA MER1_type 68 225 0 1 1329 825 190 7 26 chr15 97549550 97549701 -5945273 - B1_Mur4 SINE Alu 0 150 3 1 1329 447 215 207 7 chr15 97550351 97550501 -5944473 - MER5A DNA MER1_type -4 185 6 1 1329 834 276 72 46 chr15 97552044 97552306 -5942668 + RCHARR1 DNA MER1_type 3 271 -703 1 1329 649 296 13 26 chr15 97552421 97552603 -5942371 - ID_B1 SINE B4 -46 246 72 1 1329 471 234 0 11 chr15 97552605 97552700 -5942274 + RCHARR1 DNA MER1_type 877 970 -4 1 1329 2129 105 9 61 chr15 97553358 97553702 -5941272 + ORR1A3 LTR MaLR 1 326 0 1 1329 189 0 0 0 chr15 97554320 97554341 -5940633 + (CCA)n Simple_repeat Simple_repeat 1 21 0 1 1329 269 253 71 40 chr15 97554746 97554845 -5940129 - MamRep1161 DNA TcMar -778 179 78 1 1329 806 190 13 26 chr15 97555188 97555339 -5939635 + B1_Mur4 SINE Alu 2 150 0 1 1329 233 390 76 0 chr15 97555371 97555489 -5939485 - MER91A DNA Tip100 -58 138 12 1 1329 608 250 69 29 chr15 97555680 97555853 -5939121 + B3A SINE B2 2 181 -17 1 1329 501 228 44 20 chr15 97555930 97556069 -5938905 + B1F SINE Alu 1 141 -8 1 1329 290 324 0 0 chr15 97556084 97556158 -5938816 + ID4_ SINE ID 2 75 -8 1 1329 714 226 0 14 chr15 97556274 97556422 -5938552 - B1_Mur2 SINE Alu -2 147 2 1 1329 221 320 0 0 chr15 97557543 97557618 -5937356 + C-rich Low_complexity Low_complexity 5 79 0 1 1329 244 336 0 91 chr15 97557668 97557789 -5937185 + MamSINE1 SINE tRNA 58 167 -123 1 1329 807 84 80 44 chr15 97557823 97557960 -5937014 - B1_Mus1 SINE Alu 0 148 7 1 1329 437 311 25 0 chr15 97558202 97558324 -5936650 + ID_B1 SINE B4 95 219 -5 1 1329 312 158 0 0 chr15 97558345 97558402 -5936572 + GA-rich Low_complexity Low_complexity 2 58 0 1 1329 501 301 38 31 chr15 97558689 97558888 -5936086 + MIR SINE MIR 34 234 -34 1 1329 204 40 0 0 chr15 97561890 97561915 -5933059 + (AGGGGG)n Simple_repeat Simple_repeat 5 29 0 1 1329 1779 176 171 8 chr15 97562480 97562836 -5932138 + MTD LTR MaLR 5 418 -1 1 1329 309 118 0 0 chr15 97563299 97563350 -5931624 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 1 1329 333 177 0 0 chr15 97563399 97563478 -5931496 + (TATG)n Simple_repeat Simple_repeat 4 82 0 1 1329 348 308 103 73 chr15 97563490 97563765 -5931209 - B4A SINE B4 -11 281 27 1 1329 357 148 0 0 chr15 97563873 97563954 -5931020 + (CAGA)n Simple_repeat Simple_repeat 2 82 0 1 1329 359 271 10 10 chr15 97563954 97564051 -5930923 + HAL1-3A_ME LINE L1 1975 2071 -787 1 1329 3319 37 9 31 chr15 97564463 97564883 -5930091 + IAPLTR2a LTR ERVK 1 411 0 1 1329 3316 95 30 34 chr15 97564884 97565693 -5929281 + IAPEz-int LTR ERVK 9 662 -5819 1 1329 2142 72 0 0 chr15 97565693 97565971 -5929003 + IAPEz-int LTR ERVK 1359 1636 -4845 1 1329 5535 61 13 20 chr15 97565970 97566719 -5928255 + IAPEz-int LTR ERVK 5736 6479 -2 1 1329 3321 37 9 31 chr15 97566721 97567141 -5927833 + IAPLTR2a LTR ERVK 1 411 0 1 1329 400 242 8 104 chr15 97567655 97567671 -5927303 - ID_B1 SINE B4 0 224 216 1 1329 315 0 0 0 chr15 97567671 97567706 -5927268 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1329 400 242 8 104 chr15 97567706 97567758 -5927216 - ID_B1 SINE B4 -9 215 164 1 1329 2491 92 6 0 chr15 97567758 97568083 -5926891 + ORR1A2 LTR MaLR 1 327 0 1 1329 400 242 8 104 chr15 97568083 97568147 -5926827 - ID_B1 SINE B4 -61 163 104 1 1329 1250 136 21 16 chr15 97568331 97568525 -5926449 + B2_Mm2 SINE B2 1 195 0 1 1329 280 306 50 67 chr15 97568852 97568971 -5926003 + PB1D10 SINE Alu 1 117 0 1 1329 1364 73 11 6 chr15 97569007 97569187 -5925787 + B2_Mm2 SINE B2 1 181 -14 1 1329 434 336 65 26 chr15 97570012 97570244 -5924730 + MIR SINE MIR 20 260 -2 1 1329 318 254 135 21 chr15 97570257 97570398 -5924576 + ID_B1 SINE B4 1 157 -67 1 1329 564 273 16 88 chr15 97570535 97570728 -5924246 + B3 SINE B2 27 205 -11 1 1329 326 250 0 14 chr15 97570740 97570813 -5924161 + ID_B1 SINE B4 143 214 -10 1 1329 215 326 137 4 chr15 97572648 97572738 -5922236 + MIR SINE MIR 65 170 -106 1 1329 833 178 6 0 chr15 97573225 97573581 -5921393 + (CA)n Simple_repeat Simple_repeat 1 357 0 1 1329 459 0 0 0 chr15 97575132 97575183 -5919791 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 1329 306 0 0 0 chr15 97575536 97575570 -5919404 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1329 295 288 0 0 chr15 97576364 97576437 -5918537 + PB1D10 SINE Alu 3 75 -42 1 1329 370 347 99 12 chr15 97576417 97576459 -5918515 + B4 SINE B4 44 226 -62 1 1329 559 262 16 0 chr15 97576459 97576585 -5918389 + B1_Mur1 SINE Alu 2 129 -20 1 1329 365 273 98 85 chr15 97576638 97576802 -5918172 + B4 SINE B4 106 271 -21 1 1329 853 117 128 94 chr15 97577943 97578123 -5916851 - B2_Mm2 SINE B2 -8 187 2 1 1329 431 260 13 33 chr15 97578223 97578374 -5916600 + ID_B1 SINE B4 73 220 -4 1 1329 859 89 7 15 chr15 97578242 97578379 -5916595 + B1_Mus1 SINE Alu 12 147 -1 1 1329 231 70 51 34 chr15 97578379 97578438 -5916536 + (CAAA)n Simple_repeat Simple_repeat 1 60 0 1 1329 334 250 48 0 chr15 97578451 97578535 -5916439 - PB1D10 SINE Alu -13 104 17 1 1329 184 382 9 29 chr15 97581508 97581613 -5913361 + MIRc SINE MIR 89 191 -77 1 1329 1258 77 38 0 chr15 97581943 97582126 -5912848 - B2_Mm2 SINE B2 0 195 6 1 1329 937 255 9 23 chr15 97582738 97582955 -5912019 + B3 SINE B2 2 215 -1 1 1329 1389 211 110 24 chr15 97582994 97583274 -5911700 + MTD LTR MaLR 5 322 -97 1 1329 218 56 28 0 chr15 97583274 97583310 -5911664 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 1329 1166 37 0 0 chr15 97583310 97583445 -5911529 - B1_Mus1 SINE Alu -9 139 5 1 1329 1389 211 110 24 chr15 97583445 97583536 -5911438 + MTD LTR MaLR 323 408 -11 1 1329 1195 132 11 11 chr15 97583678 97583869 -5911105 + B2_Mm2 SINE B2 2 192 -3 1 1329 192 350 67 47 chr15 97583915 97584065 -5910909 - MIR SINE MIR -49 213 61 1 1329 224 262 158 0 chr15 97585173 97585263 -5909711 - MIRb SINE MIR -88 188 85 1 1329 1292 178 14 9 chr15 97590011 97590226 -5904748 + B3 SINE B2 1 216 0 1 1329 379 306 128 51 chr15 97590639 97590835 -5904139 - MIRb SINE MIR -39 229 19 1 1329 859 120 286 0 chr15 97591264 97591439 -5903535 + URR1A DNA MER1_type 1 225 -1 1 1329 222 194 32 16 chr15 97591759 97591822 -5903152 + C-rich Low_complexity Low_complexity 3 66 0 1 1329 534 269 78 0 chr15 97593612 97593753 -5901221 - B3A SINE B2 -42 156 5 1 1329 287 187 755 17 chr15 97593796 97593906 -5901068 - ID_B1 SINE B4 -16 208 18 1 1329 585 0 0 0 chr15 97594035 97594100 -5900874 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 1329 197 253 108 65 chr15 97594214 97594307 -5900667 - MIRb SINE MIR -169 99 3 1 1329 359 312 40 88 chr15 97594519 97594747 -5900227 + MIR SINE MIR 39 255 -7 1 1329 1091 84 0 0 chr15 97594800 97594943 -5900031 - B1_Mus2 SINE Alu 0 147 5 1 1329 341 312 36 42 chr15 97595300 97595467 -5899507 + MIRb SINE MIR 71 236 -32 1 1329 1029 40 0 0 chr15 97596446 97596572 -5898402 + (GA)n Simple_repeat Simple_repeat 2 127 0 1 1329 1196 62 7 0 chr15 97599654 97599800 -5895174 - B1_Mus1 SINE Alu 0 148 2 1 1329 2075 154 311 22 chr15 97599811 97600489 -5894485 - RMER19B LTR ERVK -27 875 1 1 1329 894 235 150 59 chr15 97600693 97601032 -5893942 + MTEa LTR MaLR 1 370 -9 1 1329 331 330 88 42 chr15 97601468 97601683 -5893291 - MIR SINE MIR -28 234 10 1 1329 1373 74 0 22 chr15 97602306 97602327 -5892647 - B2_Mm2 SINE B2 -19 176 159 1 1329 195 42 0 0 chr15 97602327 97602351 -5892623 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 1329 1373 74 0 22 chr15 97602351 97602509 -5892465 - B2_Mm2 SINE B2 -37 158 1 1 1329 202 324 40 13 chr15 97602542 97602617 -5892357 - MIR SINE MIR -123 139 63 1 1329 758 250 172 0 chr15 97602844 97603024 -5891950 + ID_B1 SINE B4 3 213 -11 1 1329 378 0 0 0 chr15 97604142 97604184 -5890790 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1329 1146 121 0 3 chr15 97604948 97605271 -5889703 + (TCC)n Simple_repeat Simple_repeat 1 321 0 2 1329 1124 165 79 42 chr15 97606446 97606661 -5888313 + URR1B DNA MER1_type 1 223 -2 2 1329 1063 165 11 0 chr15 97607267 97607455 -5887519 - URR1B DNA MER1_type -2 223 34 2 1329 586 217 70 0 chr15 97607499 97607628 -5887346 + RSINE1 SINE B4 4 141 -24 2 1329 2644 151 44 113 chr15 97607781 97608349 -5886625 - RLTR24 LTR ERV1 0 529 1 2 1329 1365 80 23 0 chr15 97608452 97608627 -5886347 + B2_Mm2 SINE B2 3 181 -14 2 1329 408 121 13 0 chr15 97608655 97608726 -5886248 + B2_Mm2 SINE B2 47 121 -95 2 1329 576 42 0 0 chr15 97608755 97608826 -5886148 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 2 1329 468 0 0 0 chr15 97609822 97609874 -5885100 + (TC)n Simple_repeat Simple_repeat 1 52 0 2 1329 228 135 0 0 chr15 97609894 97609931 -5885043 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 1329 569 126 25 83 chr15 97609935 97609961 -5885013 - B1_Mur2 SINE Alu -12 137 116 2 1329 2326 123 67 19 chr15 97609961 97610335 -5884639 - ORR1B1 LTR MaLR -2 392 1 2 1329 569 126 25 83 chr15 97610335 97610429 -5884545 - B1_Mur2 SINE Alu -34 115 24 2 1329 442 323 51 79 chr15 97610703 97610918 -5884056 - MER3 DNA MER1_type 0 209 1 2 1329 243 88 0 0 chr15 97611590 97611624 -5883350 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1329 613 157 26 9 chr15 97611624 97611740 -5883234 - B2_Mm2 SINE B2 -28 167 49 2 1329 441 0 0 0 chr15 97611752 97611801 -5883173 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 2 1329 231 259 35 0 chr15 97612105 97612163 -5882811 + PB1D7 SINE Alu 1 60 -60 2 1329 222 37 0 0 chr15 97612165 97612192 -5882782 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 2 1329 716 116 196 0 chr15 97612192 97612325 -5882649 - B2_Mm2 SINE B2 -30 165 6 2 1329 313 362 65 35 chr15 97612870 97613099 -5881875 + MLT1D LTR MaLR 267 502 -3 2 1329 1066 100 0 0 chr15 97613499 97613639 -5881335 - B1_Mus1 SINE Alu -7 141 2 2 1329 822 157 71 0 chr15 97613770 97613910 -5881064 - B1_Mur4 SINE Alu 0 150 1 2 1329 21 82 0 0 chr15 97613939 97613988 -5880986 + AT_rich Low_complexity Low_complexity 1 49 0 2 1329 336 181 121 95 chr15 97614104 97614220 -5880754 - PB1D9 SINE Alu -1 119 1 2 1329 633 191 0 31 chr15 97614274 97614404 -5880570 + B1_Mur2 SINE Alu 24 149 0 2 1329 1303 69 57 11 chr15 97614432 97614608 -5880366 + B2_Mm2 SINE B2 1 184 -11 2 1329 207 88 0 0 chr15 97614825 97614859 -5880115 + (CTGGGG)n Simple_repeat Simple_repeat 5 38 0 2 1329 308 319 7 61 chr15 97615697 97615844 -5879130 - MIRb SINE MIR -45 223 85 2 1329 1069 136 0 0 chr15 97616106 97616253 -5878721 + B1_Mus1 SINE Alu 2 148 0 2 1329 253 161 15 75 chr15 97616825 97616892 -5878082 + RLTR25B LTR ERVK 429 491 -537 2 1329 412 150 0 36 chr15 97616832 97616915 -5878059 + PB1D10 SINE Alu 36 115 -2 2 1329 198 0 0 0 chr15 97617513 97617535 -5877439 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 2 1329 233 250 0 77 chr15 97618484 97618562 -5876412 + tRNA-Ala-GCY_ tRNA tRNA 1 72 -3 2 1329 256 281 19 19 chr15 97619841 97619946 -5875028 - Charlie1b DNA MER1_type -56 467 363 2 1329 1027 109 20 0 chr15 97619973 97620120 -5874854 - B1_Mur4 SINE Alu 0 150 1 2 1329 180 216 0 0 chr15 97623201 97623252 -5871722 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1329 740 255 48 0 chr15 97624784 97624972 -5870002 + B3 SINE B2 3 199 -17 2 1329 720 181 23 0 chr15 97624966 97625099 -5869875 + B1_Mus2 SINE Alu 6 141 -6 2 1329 258 321 36 0 chr15 97625245 97625329 -5869645 + PB1D10 SINE Alu 1 87 -30 2 1329 273 301 50 50 chr15 97626763 97626882 -5868092 - MIR3 SINE MIR -38 170 52 2 1329 404 218 81 0 chr15 97628119 97628206 -5866768 - B1_Mm SINE Alu -53 94 1 2 1329 21 0 0 0 chr15 97628213 97628234 -5866740 + AT_rich Low_complexity Low_complexity 1 21 0 2 1329 231 241 189 49 chr15 97628480 97628602 -5866372 - MIR3 SINE MIR -66 210 66 2 1329 349 250 0 0 chr15 97628991 97629067 -5865907 - B1_Mur1 SINE Alu 0 149 74 2 1329 682 219 0 0 chr15 97629070 97629193 -5865781 - B1_Mur1 SINE Alu -25 124 2 2 1329 399 41 0 0 chr15 97629217 97629266 -5865708 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1329 342 364 66 33 chr15 97630508 97630690 -5864284 - MIR SINE MIR -32 230 43 2 1329 243 283 18 36 chr15 97631698 97631808 -5863166 + GA-rich Low_complexity Low_complexity 1 108 0 2 1329 1396 266 50 63 chr15 97633493 97633729 -5861245 + RLTR20B3 LTR ERVK 1 241 -336 2 1329 1001 145 0 6 chr15 97633729 97633909 -5861065 + GA-rich Low_complexity Low_complexity 1 179 0 2 1329 1396 277 51 74 chr15 97633909 97634254 -5860720 + RLTR20B3 LTR ERVK 212 534 0 2 1329 732 120 36 54 chr15 97634309 97634437 -5860537 + Lx LINE L1 6491 6622 -32 2 1329 1313 20 0 0 chr15 97634437 97634583 -5860391 + B1_Mm SINE Alu 2 147 0 2 1329 732 120 36 54 chr15 97634583 97634621 -5860353 + Lx LINE L1 6623 6653 -1 2 1329 584 279 31 83 chr15 97634684 97634812 -5860162 + MER2 DNA MER2_type 100 229 -116 2 1329 3375 33 8 2 chr15 97634812 97635206 -5859768 + MTA_Mm LTR MaLR 1 396 0 2 1329 584 279 31 83 chr15 97635206 97635331 -5859643 + MER2 DNA MER2_type 230 340 -5 2 1329 611 200 17 42 chr15 97635518 97635638 -5859336 + PB1D9 SINE Alu 3 119 -1 2 1329 645 176 8 23 chr15 97635685 97635813 -5859161 + B1_Mur4 SINE Alu 22 147 -3 2 1329 219 36 0 0 chr15 97635813 97635841 -5859133 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 1329 336 314 76 0 chr15 97635926 97636031 -5858943 + PB1D7 SINE Alu 1 113 -7 2 1329 198 0 0 0 chr15 97636223 97636245 -5858729 + (TAA)n Simple_repeat Simple_repeat 3 24 0 2 1329 180 0 0 0 chr15 97636366 97636386 -5858588 + (TC)n Simple_repeat Simple_repeat 2 21 0 2 1329 719 54 0 0 chr15 97636403 97636496 -5858478 - B1_Mus2 SINE Alu 0 147 55 2 1329 468 0 0 0 chr15 97636496 97636548 -5858426 + (TC)n Simple_repeat Simple_repeat 2 53 0 2 1329 203 321 0 0 chr15 97637856 97637909 -5857065 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1329 224 149 21 0 chr15 97640001 97640048 -5854926 + CT-rich Low_complexity Low_complexity 1 48 0 2 1329 522 143 0 0 chr15 97640048 97640132 -5854842 - PB1D9 SINE Alu -5 115 32 2 1329 204 40 0 0 chr15 97640208 97640233 -5854741 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 1329 373 369 0 0 chr15 97640904 97641083 -5853891 + (CA)n Simple_repeat Simple_repeat 1 179 0 2 1329 713 175 63 0 chr15 97646473 97646599 -5848375 - B1_Mur4 SINE Alu -8 142 9 2 1329 1090 237 53 117 chr15 97646619 97646723 -5848251 + MTD LTR MaLR 10 116 -303 2 1329 195 42 0 0 chr15 97646723 97646747 -5848227 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 1329 1090 237 53 117 chr15 97646747 97647077 -5847897 + MTD LTR MaLR 117 416 -3 2 1329 196 77 25 25 chr15 97647085 97647125 -5847849 + (CCCCCG)n Simple_repeat Simple_repeat 6 45 0 2 1329 520 71 0 0 chr15 97648172 97648242 -5846732 + B1_Mus2 SINE Alu 1 70 -77 2 1329 846 0 0 0 chr15 97648242 97648336 -5846638 + (GGAGA)n Simple_repeat Simple_repeat 2 95 0 2 1330 225 214 109 87 chr15 97648673 97648757 -5846217 + PB1D10 SINE Alu 21 109 -8 2 1330 432 51 0 0 chr15 97648757 97648816 -5846158 + (CAAG)n Simple_repeat Simple_repeat 1 59 0 2 1330 307 275 88 0 chr15 97648852 97648932 -5846042 - PB1D10 SINE Alu -13 104 18 2 1330 330 210 27 107 chr15 97649006 97649118 -5845856 - B1_Mur4 SINE Alu 0 150 48 2 1330 340 293 49 0 chr15 97649153 97649235 -5845739 + B4A SINE B4 1 86 -206 2 1330 1005 198 34 34 chr15 97649235 97649444 -5845530 + B3 SINE B2 4 212 -4 2 1330 554 330 78 24 chr15 97649500 97649705 -5845269 + B4 SINE B4 77 292 0 2 1330 205 366 0 41 chr15 97649708 97649805 -5845169 + (CA)n Simple_repeat Simple_repeat 2 94 0 2 1330 778 170 309 0 chr15 97649916 97650081 -5844893 + B3 SINE B2 1 216 0 2 1330 399 21 0 0 chr15 97650665 97650713 -5844261 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1330 329 375 47 8 chr15 97650790 97650919 -5844055 - MIR SINE MIR -33 229 96 2 1330 886 162 27 27 chr15 97650925 97651109 -5843865 + B3 SINE B2 1 184 -32 2 1330 768 127 126 7 chr15 97651424 97651567 -5843407 - URR1B DNA MER1_type -10 215 56 2 1330 271 312 147 23 chr15 97651426 97651603 -5843371 + CYRA11_Mm Unknown Y-chromosome 183 381 -236 2 1330 235 281 0 0 chr15 97653031 97653088 -5841886 + tRNA-Ala-GCY_ tRNA tRNA 5 61 -14 2 1330 265 235 72 14 chr15 97653451 97653520 -5841454 + MIRc SINE MIR 171 243 -25 2 1330 287 368 46 59 chr15 97655158 97655311 -5839663 - MIR SINE MIR -70 192 42 2 1330 181 314 44 55 chr15 97657381 97657472 -5837502 + L2b LINE L2 3246 3335 -40 2 1330 897 132 0 0 chr15 97657710 97657854 -5837120 + (CA)n Simple_repeat Simple_repeat 2 145 0 2 1330 1048 104 7 0 chr15 97658178 97658322 -5836652 + B1_Mus2 SINE Alu 2 146 -1 2 1330 1055 114 6 0 chr15 97658327 97658493 -5836481 + (GAAA)n Simple_repeat Simple_repeat 2 168 0 2 1330 27 0 0 0 chr15 97661842 97661869 -5833105 + GC_rich Low_complexity Low_complexity 1 27 0 2 1330 27 81 0 0 chr15 97662169 97662231 -5832743 + GC_rich Low_complexity Low_complexity 1 62 0 2 1330 419 0 20 0 chr15 97662460 97662511 -5832463 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1330 384 119 0 0 chr15 97664576 97664635 -5830339 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 2 1330 597 149 0 0 chr15 97664639 97664733 -5830241 + B1_Mur3 SINE Alu 42 135 -14 2 1330 692 251 8 102 chr15 97665005 97665240 -5829734 - B3 SINE B2 0 216 4 2 1330 324 0 0 0 chr15 97665244 97665280 -5829694 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1330 748 294 43 40 chr15 97665745 97666021 -5828953 + B4A SINE B4 3 279 -13 3 1330 246 105 0 0 chr15 97666077 97666115 -5828859 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1330 341 22 22 0 chr15 97666153 97666199 -5828775 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 1330 22 0 0 0 chr15 97666235 97666257 -5828717 + AT_rich Low_complexity Low_complexity 1 22 0 3 1330 626 265 8 8 chr15 97666257 97666390 -5828584 + B3A SINE B2 1 133 -65 3 1330 480 18 0 0 chr15 97666392 97666449 -5828525 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1330 387 0 0 0 chr15 97666449 97666491 -5828483 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 3 1330 221 228 18 0 chr15 97666562 97666619 -5828355 - MIR SINE MIR -136 126 69 3 1330 381 22 0 0 chr15 97667170 97667216 -5827758 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1330 236 263 115 10 chr15 97667473 97667569 -5827405 + MIRc SINE MIR 117 222 -46 3 1330 293 0 27 0 chr15 97667691 97667728 -5827246 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1330 364 325 45 32 chr15 97668810 97668966 -5826008 - MIRm SINE MIR -105 171 14 3 1330 481 205 229 10 chr15 97671544 97671736 -5823238 - MER33 DNA MER1_type -90 234 1 3 1330 798 212 10 55 chr15 97671987 97672187 -5822787 + B3 SINE B2 1 191 -25 3 1330 320 355 33 0 chr15 97672941 97673062 -5821912 + L1MC LINE L1 5695 5819 -2063 3 1330 424 269 0 9 chr15 97673174 97673283 -5821691 + PB1D10 SINE Alu 1 108 -9 3 1330 270 0 0 0 chr15 97673294 97673324 -5821650 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 3 1330 259 237 0 0 chr15 97675743 97675802 -5819172 - MIRc SINE MIR -125 143 85 3 1330 285 29 0 0 chr15 97675829 97675863 -5819111 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 3 1330 581 197 43 43 chr15 97675863 97676001 -5818973 - B1_Mur3 SINE Alu -10 139 2 3 1330 593 118 109 0 chr15 97676031 97676141 -5818833 - B1_Mur1 SINE Alu -1 148 27 3 1330 324 308 54 45 chr15 97676178 97676290 -5818684 - RSINE1 SINE B4 -15 150 38 3 1330 2773 153 112 6 chr15 97676548 97677068 -5817906 + RMER15 LTR ERVL 1 575 0 3 1330 806 234 75 0 chr15 97678096 97678284 -5816690 + B3 SINE B2 1 202 -14 3 1330 294 29 0 0 chr15 97678287 97678322 -5816652 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 1330 450 36 0 0 chr15 97678582 97678638 -5816336 + (TTGG)n Simple_repeat Simple_repeat 2 57 0 3 1330 290 337 0 0 chr15 97678638 97678736 -5816238 - PB1D10 SINE Alu -10 107 10 3 1330 737 310 79 47 chr15 97679124 97679530 -5815444 + Charlie1b DNA MER1_type 9 427 -96 3 1330 722 274 13 25 chr15 97679549 97679772 -5815202 - ID_B1 SINE B4 -67 225 11 3 1330 248 315 67 0 chr15 97679694 97679783 -5815191 + Charlie1b DNA MER1_type 429 523 0 3 1330 1094 80 74 0 chr15 97680522 97680684 -5814290 - B2_Mm2 SINE B2 -7 188 15 3 1330 272 312 0 25 chr15 97680714 97680793 -5814181 - MIRb SINE MIR -86 182 106 3 1330 452 312 70 5 chr15 97681327 97681514 -5813460 + LTR16A LTR ERVL 147 345 -106 3 1330 438 209 53 3 chr15 97681692 97681786 -5813188 + B1F SINE Alu 52 143 -6 3 1330 233 191 0 0 chr15 97681997 97682044 -5812930 - B1_Mur2 SINE Alu 0 149 103 3 1330 783 104 0 0 chr15 97682059 97682174 -5812800 + (TTTC)n Simple_repeat Simple_repeat 2 116 0 3 1330 3744 224 99 25 chr15 97682190 97683505 -5811469 - RMER1B Other Other 0 1066 74 3 1330 252 300 112 0 chr15 97683517 97683597 -5811377 - RMER1B Other Other -976 90 2 3 1330 855 27 9 0 chr15 97683646 97683757 -5811217 - B1_Mus1 SINE Alu 0 148 37 3 1330 663 152 98 8 chr15 97683762 97683895 -5811079 + B1_Mus2 SINE Alu 1 145 -2 3 1330 198 0 0 0 chr15 97684284 97684306 -5810668 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 3 1330 200 413 18 35 chr15 97684803 97684916 -5810058 + MIR SINE MIR 141 251 -11 3 1330 245 271 47 12 chr15 97688512 97688598 -5806376 + MIRm SINE MIR 188 276 0 3 1330 417 39 0 0 chr15 97690118 97690169 -5804805 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1330 676 304 77 4 chr15 97690170 97690418 -5804556 - B4A SINE B4 -23 269 4 3 1330 1382 160 70 103 chr15 97690418 97690815 -5804159 + ORR1C2 LTR MaLR 1 384 0 3 1330 21 36 0 0 chr15 97691124 97691152 -5803822 + AT_rich Low_complexity Low_complexity 1 28 0 3 1330 455 285 28 42 chr15 97691156 97691299 -5803675 - RSINE1 SINE B4 0 165 25 3 1330 1365 67 0 6 chr15 97692265 97692446 -5802528 - B2_Mm2 SINE B2 -14 181 2 3 1330 26 30 0 0 chr15 97692446 97692479 -5802495 + AT_rich Low_complexity Low_complexity 1 33 0 3 1330 350 264 22 104 chr15 97692495 97692630 -5802344 - RSINE1 SINE B4 -1 164 41 3 1330 968 130 6 0 chr15 97692647 97692808 -5802166 + (TTTTC)n Simple_repeat Simple_repeat 3 164 0 3 1330 383 54 0 0 chr15 97692893 97692949 -5802025 + L1_Mus2 LINE L1 6511 6566 0 3 1330 442 219 94 0 chr15 97692990 97693086 -5801888 + B1F SINE Alu 24 128 -21 3 1330 207 114 0 0 chr15 97693096 97693131 -5801843 + (CAAG)n Simple_repeat Simple_repeat 1 35 0 3 1330 208 314 0 0 chr15 97693730 97693781 -5801193 + L2b LINE L2 3230 3280 -95 3 1330 597 180 0 0 chr15 97695242 97695414 -5799560 + (TG)n Simple_repeat Simple_repeat 2 173 0 3 1330 757 134 0 22 chr15 97695425 97695608 -5799366 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 1330 324 158 43 9 chr15 97696201 97696316 -5798658 + (TA)n Simple_repeat Simple_repeat 2 120 0 3 1330 504 324 41 54 chr15 97696372 97696567 -5798407 - B4A SINE B4 -2 290 94 3 1330 770 263 48 5 chr15 97696567 97696773 -5798201 - B3 SINE B2 0 216 2 3 1330 504 324 41 54 chr15 97696773 97696871 -5798103 - B4A SINE B4 -199 93 1 3 1330 623 203 35 21 chr15 97698334 97698475 -5796499 - B1_Mur1 SINE Alu 0 149 7 3 1330 1140 84 0 0 chr15 97698679 97698858 -5796116 + (GA)n Simple_repeat Simple_repeat 1 179 0 3 1330 860 68 158 33 chr15 97700659 97700811 -5794163 - B2_Mm2 SINE B2 0 195 25 3 1330 1249 72 27 16 chr15 97700818 97701003 -5793971 - B2_Mm2 SINE B2 -8 187 1 3 1330 222 37 0 0 chr15 97703260 97703287 -5791687 + (TTA)n Simple_repeat Simple_repeat 2 28 0 3 1330 874 156 101 0 chr15 97703294 97703473 -5791501 - B3 SINE B2 -19 197 1 3 1330 660 174 0 34 chr15 97703481 97703600 -5791374 - B1_Mur2 SINE Alu -5 144 30 3 1330 229 295 10 83 chr15 97703521 97703617 -5791357 - MT2B LTR ERVL -344 257 169 3 1330 598 269 120 15 chr15 97703721 97703934 -5791040 - MIR SINE MIR -35 241 4 3 1330 530 236 20 41 chr15 97704084 97704230 -5790744 + RSINE1 SINE B4 2 144 -21 3 1330 233 180 40 0 chr15 97704938 97704988 -5789986 - L2c LINE L2 0 3387 3336 3 1330 271 270 52 67 chr15 97705403 97705538 -5789436 + MIRb SINE MIR 120 252 -16 3 1330 215 225 0 0 chr15 97705506 97705546 -5789428 + L2a LINE L2 3375 3414 -12 3 1330 1123 81 0 0 chr15 97707520 97707668 -5787306 + B1_Mus1 SINE Alu 1 148 0 3 1330 213 119 0 0 chr15 97707668 97707710 -5787264 + (A)n Simple_repeat Simple_repeat 1 42 0 3 1330 315 0 0 0 chr15 97709662 97709697 -5785277 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1330 360 0 0 0 chr15 97709697 97709736 -5785238 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 1330 571 293 113 65 chr15 97712453 97712763 -5782211 + MER82 DNA MER2_type 107 431 -222 3 1330 225 102 0 93 chr15 97712773 97712816 -5782158 + ID4 SINE ID 7 45 -38 3 1330 451 337 122 10 chr15 97712861 97713065 -5781909 + MER82 DNA MER2_type 427 653 0 3 1330 494 279 50 16 chr15 97714421 97714603 -5780371 + Lx6 LINE L1 7268 7455 -5 3 1330 294 95 0 0 chr15 97716946 97716988 -5777986 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1330 428 311 7 13 chr15 97717091 97717241 -5777733 - RSINE1 SINE B4 -14 151 3 3 1330 1326 60 16 16 chr15 97717253 97717439 -5777535 - B2_Mm2 SINE B2 -9 186 1 3 1330 1194 34 0 0 chr15 97717480 97717626 -5777348 + B1_Mm SINE Alu 2 147 0 3 1330 273 89 0 0 chr15 97717626 97717671 -5777303 + (A)n Simple_repeat Simple_repeat 1 45 0 3 1330 600 276 80 37 chr15 97717709 97717805 -5777169 - RMER30 DNA MER1_type -2 200 110 3 1330 201 74 0 0 chr15 97717805 97717832 -5777142 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1330 600 276 80 37 chr15 97717832 97717923 -5777051 - RMER30 DNA MER1_type -93 109 5 3 1330 261 333 37 52 chr15 97720344 97720480 -5774494 - MIRc SINE MIR -20 248 115 3 1330 341 301 26 0 chr15 97720602 97720715 -5774259 - MIR SINE MIR -29 233 118 3 1330 229 273 58 25 chr15 97723253 97723388 -5771586 - MIR SINE MIR -52 224 72 3 1330 926 119 7 0 chr15 97723999 97724142 -5770832 + B1_Mur3 SINE Alu 5 148 -1 3 1330 294 271 0 0 chr15 97725630 97725700 -5769274 - ID4_ SINE ID -10 73 4 3 1330 1153 54 0 0 chr15 97725725 97725873 -5769101 - B1_Mus1 SINE Alu 0 148 1 3 1330 1032 219 9 5 chr15 97728204 97728424 -5766550 - ID_B1 SINE B4 -1 223 3 3 1330 759 115 115 0 chr15 97728744 97728866 -5766108 + B1_Mur4 SINE Alu 1 136 -14 3 1330 223 301 118 24 chr15 97728922 97729007 -5765967 + B4A SINE B4 8 100 -192 3 1330 266 253 21 21 chr15 97729036 97729133 -5765841 + B4A SINE B4 196 292 0 3 1330 250 363 97 5 chr15 97729425 97729503 -5765471 + MIR SINE MIR 20 115 -147 3 1330 558 0 0 0 chr15 97729503 97729565 -5765409 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 1330 250 363 97 5 chr15 97729565 97729702 -5765272 + MIR SINE MIR 116 255 -7 3 1330 286 331 27 54 chr15 97730526 97730673 -5764301 + MIRc SINE MIR 14 156 -112 3 1330 414 100 0 0 chr15 97731856 97731916 -5763058 + (TTTG)n Simple_repeat Simple_repeat 2 61 0 3 1330 303 281 22 0 chr15 97731995 97732084 -5762890 + L1M5 LINE L1 5713 5803 -361 3 1330 428 244 292 14 chr15 97732342 97732554 -5762420 + B4 SINE B4 5 275 -17 3 1330 945 74 0 0 chr15 97732556 97732691 -5762283 + (CA)n Simple_repeat Simple_repeat 2 136 0 4 1330 180 0 0 0 chr15 97732708 97732728 -5762246 + (ATTG)n Simple_repeat Simple_repeat 1 20 0 4 1330 469 308 25 6 chr15 97732728 97732885 -5762089 - RSINE1 SINE B4 -2 163 4 4 1330 189 0 0 0 chr15 97733002 97733023 -5761951 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 4 1330 1137 134 148 21 chr15 97733454 97733690 -5761284 + Lx4A LINE L1 6793 7058 0 4 1330 217 259 0 18 chr15 97734461 97734516 -5760458 + MIRb SINE MIR 116 169 -99 4 1330 435 38 0 0 chr15 97736191 97736244 -5758730 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1330 474 96 0 0 chr15 97737811 97737884 -5757090 + (GGA)n Simple_repeat Simple_repeat 2 74 0 4 1330 192 149 0 0 chr15 97740137 97740184 -5754790 + (C)n Simple_repeat Simple_repeat 1 47 0 4 1330 772 194 206 0 chr15 97740531 97740706 -5754268 + B3 SINE B2 1 211 -5 4 1330 519 60 0 0 chr15 97740706 97740773 -5754201 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 4 1330 550 120 29 39 chr15 97741336 97741440 -5753534 + B1_Mur4 SINE Alu 48 150 0 4 1330 1363 51 28 0 chr15 97741653 97741829 -5753145 - B2_Mm2 SINE B2 -14 181 1 4 1330 1071 45 0 0 chr15 97742668 97742801 -5752173 + (GAAA)n Simple_repeat Simple_repeat 4 136 0 4 1330 1437 164 46 114 chr15 97742810 97743222 -5751752 - RMER10A LTR ERVL -17 425 42 4 1330 600 154 6 13 chr15 97743252 97743410 -5751564 + CT-rich Low_complexity Low_complexity 2 158 0 4 1330 555 62 0 0 chr15 97743410 97743490 -5751484 + (CA)n Simple_repeat Simple_repeat 1 80 0 4 1330 1261 95 21 0 chr15 97743633 97743822 -5751152 + B2_Mm1a SINE B2 1 193 0 4 1330 1694 176 59 63 chr15 97745242 97745686 -5749288 - RMER10A LTR ERVL 0 442 1 4 1330 393 308 58 0 chr15 97745716 97745836 -5749138 - Charlie7 DNA MER1_type -1924 688 562 4 1330 247 170 245 0 chr15 97745996 97746090 -5748884 + B1_Mur4 SINE Alu 33 149 -1 4 1330 239 113 19 0 chr15 97746514 97746567 -5748407 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 4 1330 1156 68 0 0 chr15 97746573 97746721 -5748253 - B1_Mus1 SINE Alu 0 148 1 4 1330 212 320 69 20 chr15 97746849 97746951 -5748023 + MIRb SINE MIR 75 181 -87 4 1330 327 266 60 26 chr15 97747037 97747153 -5747821 - B1F1 SINE Alu -9 140 21 4 1330 571 215 16 32 chr15 97747231 97747356 -5747618 - B1_Mur2 SINE Alu -2 147 25 4 1330 441 281 23 62 chr15 97747395 97747524 -5747450 - RSINE1 SINE B4 0 165 42 4 1330 324 244 61 0 chr15 97747514 97747596 -5747378 + B1F SINE Alu 31 117 -32 4 1330 305 366 0 31 chr15 97747850 97747977 -5746997 + L1ME3A LINE L1 6047 6169 -4 4 1330 184 219 24 0 chr15 97748022 97748063 -5746911 - MIRc SINE MIR -112 156 115 4 1330 247 294 130 0 chr15 97748993 97749085 -5745889 + PB1 SINE Alu 21 124 -3 4 1330 183 80 0 0 chr15 97749176 97749201 -5745773 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 4 1330 1026 68 0 0 chr15 97749204 97749337 -5745637 + B1_Mus1 SINE Alu 2 134 -14 4 1330 225 0 0 0 chr15 97749337 97749362 -5745612 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 4 1330 423 307 46 106 chr15 97749484 97749768 -5745206 + L1MEd LINE L1 767 1033 -5103 4 1330 590 277 44 17 chr15 97750339 97750519 -5744455 + B3A SINE B2 9 193 -5 4 1330 316 360 33 15 chr15 97750522 97750756 -5744218 + L1MEd LINE L1 2599 2835 -3311 4 1330 286 207 17 0 chr15 97750796 97750854 -5744120 + B1F2 SINE Alu 3 61 -88 4 1330 425 254 108 46 chr15 97750860 97751054 -5743920 + B4A SINE B4 1 206 -86 4 1330 1279 15 9 35 chr15 97751106 97751536 -5743438 + (CA)n Simple_repeat Simple_repeat 1 418 0 4 1330 1271 14 11 37 chr15 97751558 97751993 -5742981 + (CA)n Simple_repeat Simple_repeat 1 423 0 4 1330 282 260 0 0 chr15 97752015 97752092 -5742882 + ID_B1 SINE B4 145 221 -3 4 1330 593 248 56 0 chr15 97752098 97752259 -5742715 + B3A SINE B2 7 176 -22 4 1330 1021 164 97 0 chr15 97752501 97752696 -5742278 - B3 SINE B2 -1 215 2 4 1330 308 330 54 0 chr15 97752899 97753011 -5741963 + L1MEd LINE L1 2894 3011 -3135 4 1330 1458 207 172 8 chr15 97753100 97753460 -5741514 + MTD LTR MaLR 1 419 0 4 1330 1142 48 0 33 chr15 97753654 97753806 -5741168 - B1_Mus1 SINE Alu 0 148 2 4 1330 212 0 36 0 chr15 97753809 97753837 -5741137 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 1330 432 350 110 40 chr15 97753856 97754228 -5740746 + L1MEd LINE L1 3138 3535 -2611 4 1330 236 350 68 0 chr15 97754434 97754537 -5740437 - LTR16D LTR ERVL -325 326 217 4 1330 353 302 83 23 chr15 97754704 97754836 -5740138 + L1MCa LINE L1 1824 1963 -4545 4 1330 369 0 0 0 chr15 97754836 97754877 -5740097 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 1330 342 0 0 0 chr15 97754919 97754957 -5740017 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1330 659 282 33 28 chr15 97754957 97755172 -5739802 - B4 SINE B4 -75 217 2 4 1330 303 277 0 57 chr15 97755197 97755285 -5739689 + PB1D10 SINE Alu 34 116 -1 4 1330 344 280 189 65 chr15 97755752 97756107 -5738867 - RMER10A LTR ERVL -25 417 19 4 1330 21 0 0 0 chr15 97756504 97756525 -5738449 + AT_rich Low_complexity Low_complexity 1 21 0 4 1330 1075 218 0 0 chr15 97756529 97756740 -5738234 - B3 SINE B2 -5 211 1 4 1330 271 26 0 0 chr15 97756743 97756782 -5738192 - B3 SINE B2 -177 39 1 4 1330 226 77 0 0 chr15 97756785 97756824 -5738150 - B3 SINE B2 -177 39 1 4 1330 219 167 0 0 chr15 97758717 97758759 -5736215 + (ATG)n Simple_repeat Simple_repeat 3 44 0 4 1330 493 248 213 44 chr15 97758841 97759090 -5735884 + B4A SINE B4 2 292 0 4 1330 538 313 0 32 chr15 97759097 97759282 -5735692 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 1330 282 204 19 10 chr15 97759339 97759443 -5735531 + (CA)n Simple_repeat Simple_repeat 2 106 0 4 1330 192 291 0 0 chr15 97759497 97759655 -5735319 + CT-rich Low_complexity Low_complexity 2 159 0 4 1330 232 304 126 10 chr15 97759932 97760035 -5734939 + MLT1E2 LTR MaLR 156 270 -357 4 1330 451 287 124 75 chr15 97760055 97760281 -5734693 + MLT1E2 LTR MaLR 322 558 -69 4 1330 223 204 9 29 chr15 97760503 97760571 -5734403 - PB1D7 SINE Alu 0 127 61 4 1330 234 136 0 0 chr15 97760574 97760618 -5734356 + (ATG)n Simple_repeat Simple_repeat 1 44 0 4 1330 691 167 71 0 chr15 97760626 97760752 -5734222 - B1_Mur1 SINE Alu -2 147 13 4 1330 274 267 0 0 chr15 97760753 97760813 -5734161 - ID_B1 SINE B4 -67 157 98 4 1330 219 36 0 0 chr15 97760815 97760843 -5734131 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 4 1330 518 189 11 0 chr15 97760843 97760938 -5734036 - ID_B1 SINE B4 -8 216 121 4 1330 205 152 0 0 chr15 97761149 97761182 -5733792 + (CTCG)n Simple_repeat Simple_repeat 3 35 0 4 1330 2295 135 25 122 chr15 97763956 97764472 -5730502 + RMER4A LTR ERVK 1 466 0 4 1330 410 284 0 25 chr15 97764906 97765025 -5729949 - PB1D10 SINE Alu 0 117 2 4 1330 585 190 0 0 chr15 97765093 97765272 -5729702 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 1330 862 220 43 13 chr15 97765713 97765943 -5729031 + 7SK RNA RNA 1 237 -94 4 1330 414 0 0 0 chr15 97766100 97766146 -5728828 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1330 1116 75 0 7 chr15 97766451 97766599 -5728375 - B1_Mus1 SINE Alu -1 147 1 4 1330 241 299 42 17 chr15 97766631 97766750 -5728224 + L1M5 LINE L1 2583 2704 -3442 4 1330 307 357 43 0 chr15 97766776 97766916 -5728058 + B1F SINE Alu 1 146 -3 4 1330 405 153 0 0 chr15 97766916 97766988 -5727986 + (CA)n Simple_repeat Simple_repeat 1 72 0 4 1330 905 130 48 48 chr15 97767035 97767221 -5727753 + B2_Mm2 SINE B2 2 187 -8 4 1330 1047 75 0 0 chr15 97767253 97767387 -5727587 + B1_Mus1 SINE Alu 5 138 -10 4 1330 312 240 85 19 chr15 97767400 97767557 -5727417 + B3 SINE B2 27 195 0 4 1330 23 0 0 0 chr15 97767594 97767617 -5727357 + AT_rich Low_complexity Low_complexity 1 23 0 4 1330 3368 23 2 0 chr15 97768041 97768436 -5726538 - MTA_Mm LTR MaLR 0 396 1 4 1330 324 282 76 57 chr15 97769707 97769865 -5725109 + MER5A1 DNA MER1_type 3 163 -3 4 1330 2067 175 81 71 chr15 97770513 97771035 -5723939 + RLTR11A LTR ERVK 1 527 -1 4 1330 232 362 64 75 chr15 97771236 97771502 -5723472 - LTR85c LTR Gypsy? -157 666 404 4 1330 1457 187 72 72 chr15 97771838 97772014 -5722960 + ORR1C1 LTR MaLR 8 171 -207 4 1330 267 31 0 0 chr15 97772014 97772046 -5722928 + (TCTCCC)n Simple_repeat Simple_repeat 5 36 0 4 1330 1457 187 72 72 chr15 97772046 97772232 -5722742 + ORR1C1 LTR MaLR 172 369 -9 4 1330 450 0 0 0 chr15 97772236 97772286 -5722688 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1330 1372 201 101 0 chr15 97772286 97772584 -5722390 - MT2A LTR ERVL -65 468 141 4 1330 1770 151 2 146 chr15 97772603 97772844 -5722130 + RMER19B LTR ERVK 1 242 -660 4 1330 213 39 0 0 chr15 97772844 97772870 -5722104 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 4 1330 1770 151 2 146 chr15 97772870 97773025 -5721949 + RMER19B LTR ERVK 243 340 -562 4 1330 430 134 0 0 chr15 97773025 97773092 -5721882 + URR1B DNA MER1_type 159 225 0 4 1330 748 248 200 21 chr15 97773092 97773372 -5721602 - MTEa LTR MaLR -49 330 1 4 1330 663 54 0 0 chr15 97773486 97773578 -5721396 + (GCCTAA)n Simple_repeat Simple_repeat 3 94 0 4 1330 669 25 0 0 chr15 97774792 97774871 -5720103 + (CA)n Simple_repeat Simple_repeat 1 79 0 4 1330 523 280 13 26 chr15 97774953 97775107 -5719867 - RSINE1 SINE B4 0 165 14 4 1330 404 67 78 0 chr15 97775997 97776087 -5718887 + (TCCC)n Simple_repeat Simple_repeat 2 98 0 4 1330 807 185 0 0 chr15 97776857 97777003 -5717971 + B1_Mur3 SINE Alu 2 147 -2 4 1330 360 273 57 57 chr15 97778766 97778923 -5716051 + MIR SINE MIR 15 178 -98 4 1330 253 276 77 8 chr15 97779000 97779117 -5715857 + L1ME3B LINE L1 6064 6188 -52 4 1330 420 20 0 0 chr15 97779557 97779606 -5715368 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1331 661 238 18 6 chr15 97781198 97781363 -5713611 + B4A SINE B4 122 288 -4 5 1331 647 282 72 5 chr15 97781431 97781638 -5713336 + MER2 DNA MER2_type 118 338 -7 5 1331 288 0 0 0 chr15 97783258 97783290 -5711684 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 1331 363 201 5 63 chr15 97786001 97786192 -5708782 + CT-rich Low_complexity Low_complexity 1 180 0 5 1331 610 323 54 44 chr15 97787294 97787589 -5707385 - BGLII_B LTR ERVK -8 433 136 5 1331 1172 190 125 68 chr15 97787598 97787751 -5707223 + RLTR11A LTR ERVK 7 187 -341 5 1331 3501 33 2 0 chr15 97787751 97788146 -5706828 + MTA_Mm LTR MaLR 1 396 0 5 1331 1172 190 125 68 chr15 97788146 97788343 -5706631 + RLTR11A LTR ERVK 188 377 -151 5 1331 1245 79 16 53 chr15 97788343 97788530 -5706444 + B2_Mm2 SINE B2 2 181 -14 5 1331 1136 112 90 0 chr15 97788573 97788751 -5706223 + B2_Mm2 SINE B2 2 195 0 5 1331 692 208 25 12 chr15 97788753 97788914 -5706060 + RLTR11A LTR ERVK 366 528 0 5 1331 497 219 78 35 chr15 97788915 97789057 -5705917 - RLTR11A2 LTR ERVK -379 148 1 5 1331 516 157 261 0 chr15 97790068 97790183 -5704791 + B1_Mus2 SINE Alu 3 147 0 5 1331 13848 70 12 13 chr15 97790185 97792763 -5702211 + L1VL2 LINE L1 101 2983 -632 5 1331 228 313 133 20 chr15 97793518 97793668 -5701306 - MLT1J LTR MaLR -144 368 202 5 1331 1212 105 41 0 chr15 97793825 97793997 -5700977 + B2_Mm2 SINE B2 2 180 -15 5 1331 370 264 154 8 chr15 97793998 97794128 -5700846 - B1F1 SINE Alu 0 149 1 5 1331 1186 270 31 19 chr15 97795656 97795973 -5699001 - MTE2a LTR MaLR 0 379 59 5 1331 333 0 0 0 chr15 97796894 97796931 -5698043 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 5 1331 326 257 14 0 chr15 97796931 97797005 -5697969 - ID2 SINE ID -7 76 2 5 1331 1003 211 46 5 chr15 97799270 97799465 -5695509 + B3 SINE B2 6 208 -8 5 1331 198 261 116 0 chr15 97800273 97800342 -5694632 + L2a LINE L2 3350 3426 0 5 1331 372 22 0 0 chr15 97801438 97801483 -5693491 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 5 1331 1070 229 35 11 chr15 97801494 97801754 -5693220 - B4A SINE B4 -22 270 5 5 1331 3384 45 8 0 chr15 97801996 97802393 -5692581 + MTB LTR MaLR 1 400 0 5 1331 225 281 0 17 chr15 97802459 97802483 -5692491 - RSINE1 SINE B4 -1 164 141 5 1331 423 0 0 0 chr15 97802483 97802530 -5692444 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1331 315 215 15 30 chr15 97802530 97802589 -5692385 - B4 SINE B4 -7 285 227 5 1331 589 182 266 24 chr15 97802675 97802844 -5692130 - B3 SINE B2 -4 212 3 5 1331 492 18 0 0 chr15 97802934 97802991 -5691983 + (TC)n Simple_repeat Simple_repeat 1 57 0 5 1331 1361 89 0 27 chr15 97803339 97803524 -5691450 + B2_Mm2 SINE B2 2 181 -14 5 1331 321 88 81 81 chr15 97803719 97803781 -5691193 - L1Md_F LINE L1 -5812 707 646 5 1331 246 242 15 15 chr15 97804472 97804539 -5690435 - ID4 SINE ID -13 70 4 5 1331 233 240 12 74 chr15 97805713 97805794 -5689180 + MTEb LTR MaLR 288 363 -16 5 1331 396 0 0 0 chr15 97814631 97814675 -5680299 + (TTGG)n Simple_repeat Simple_repeat 2 45 0 5 1331 207 0 0 0 chr15 97814938 97814961 -5680013 + (TC)n Simple_repeat Simple_repeat 2 24 0 5 1331 237 33 0 0 chr15 97817507 97817537 -5677437 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1331 561 30 0 0 chr15 97820410 97820477 -5674497 + (TC)n Simple_repeat Simple_repeat 2 68 0 5 1331 576 0 0 0 chr15 97821070 97821134 -5673840 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 1331 203 0 0 36 chr15 97822314 97822342 -5672632 + (TGGGGG)n Simple_repeat Simple_repeat 3 29 0 5 1331 807 189 0 0 chr15 97822519 97822662 -5672312 - URR1B DNA MER1_type 0 225 83 5 1331 217 375 31 10 chr15 97823747 97823844 -5671130 + MIRb SINE MIR 97 195 -73 5 1331 302 255 69 30 chr15 97824248 97824349 -5670625 - PB1D10 SINE Alu -12 105 1 5 1331 204 274 0 0 chr15 97827193 97827244 -5667730 + GA-rich Low_complexity Low_complexity 2 52 0 5 1331 23 0 0 0 chr15 97829670 97829693 -5665281 + AT_rich Low_complexity Low_complexity 1 23 0 5 1331 22 56 0 0 chr15 97830793 97830829 -5664145 + AT_rich Low_complexity Low_complexity 1 36 0 5 1331 223 238 0 16 chr15 97832716 97832780 -5662194 + G-rich Low_complexity Low_complexity 3 65 0 5 1331 315 0 0 0 chr15 97836563 97836598 -5658376 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1331 234 242 0 0 chr15 97836885 97836951 -5658023 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 5 1331 1176 75 0 0 chr15 97837010 97837157 -5657817 + B1_Mus1 SINE Alu 2 148 0 5 1331 4546 175 16 19 chr15 97837695 97838582 -5656392 + Lx9 LINE L1 6601 7484 -160 5 1331 303 28 0 0 chr15 97838596 97838632 -5656342 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1331 935 152 7 0 chr15 97838646 97838791 -5656183 - B1_Mus2 SINE Alu -1 146 1 5 1331 536 185 0 0 chr15 97839100 97839181 -5655793 - ID4_ SINE ID -1 82 2 5 1331 239 306 12 12 chr15 97839755 97839841 -5655133 + GA-rich Low_complexity Low_complexity 3 88 0 5 1331 1136 73 0 0 chr15 97840257 97840394 -5654580 + B1_Mus1 SINE Alu 2 138 -10 5 1331 450 0 0 0 chr15 97840780 97840830 -5654144 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 1331 360 0 0 0 chr15 97840830 97840869 -5654105 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1331 299 226 109 34 chr15 97841168 97841287 -5653687 + MLT1A1 LTR MaLR 281 408 0 5 1331 192 214 66 79 chr15 97841539 97841615 -5653359 + L4 LINE RTE 472 546 -1483 5 1331 954 166 0 0 chr15 97842619 97842794 -5652180 + GA-rich Low_complexity Low_complexity 3 177 0 5 1331 719 199 37 0 chr15 97843668 97843804 -5651170 + RSINE1 SINE B4 4 144 -21 5 1331 1147 56 28 0 chr15 97843829 97843972 -5651002 + B1_Mus1 SINE Alu 2 148 0 5 1331 376 292 74 8 chr15 97844016 97844137 -5650837 + MER3 DNA MER1_type 5 133 -76 5 1331 833 99 0 0 chr15 97844141 97844252 -5650722 - B2_Mm2 SINE B2 -82 113 3 5 1331 354 275 12 0 chr15 97844380 97844460 -5650514 + MER5A1 DNA MER1_type 78 158 -8 5 1331 449 301 20 27 chr15 97844489 97844639 -5650335 + MER5B DNA MER1_type 30 178 0 5 1331 227 241 56 67 chr15 97844786 97844875 -5650099 + Charlie12 DNA MER1_type 2454 2541 -332 5 1331 264 219 175 24 chr15 97846069 97846195 -5648779 - MER96B DNA hAT -212 205 61 5 1331 696 244 37 92 chr15 97846224 97846441 -5648533 + ID_B1 SINE B4 5 209 -15 5 1331 2037 134 0 60 chr15 97846445 97846779 -5648195 + ORR1A2 LTR MaLR 6 319 -8 5 1331 203 189 0 0 chr15 97846795 97846832 -5648142 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 5 1331 300 205 100 25 chr15 97846880 97846960 -5648014 + PB1D10 SINE Alu 18 103 -14 5 1331 272 91 0 22 chr15 97846965 97847010 -5647964 + (GGGA)n Simple_repeat Simple_repeat 1 44 0 5 1331 982 130 7 0 chr15 97847797 97847935 -5647039 - B1_Mus2 SINE Alu -7 140 2 5 1331 335 129 60 29 chr15 97848335 97848431 -5646543 + B1_Mur2 SINE Alu 40 149 0 5 1331 186 43 0 0 chr15 97848431 97848454 -5646520 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 5 1331 1010 139 39 34 chr15 97848469 97848648 -5646326 + ORR1B2 LTR MaLR 3 182 -185 5 1331 2231 162 86 25 chr15 97848644 97849087 -5645887 + ORR1B2-int LTR MaLR 153 622 -887 5 1331 920 172 0 0 chr15 97849094 97849239 -5645735 + B1_Mus2 SINE Alu 2 146 -1 5 1331 216 210 16 0 chr15 97849246 97849308 -5645666 + A-rich Low_complexity Low_complexity 4 66 0 5 1331 243 0 0 0 chr15 97849742 97849769 -5645205 + (CAAAA)n Simple_repeat Simple_repeat 5 31 0 5 1331 249 265 77 112 chr15 97849818 97849988 -5644986 + L1MC5 LINE L1 7725 7888 -73 5 1331 851 330 14 11 chr15 97851026 97851311 -5643663 - B4 SINE B4 -5 287 2 5 1331 613 238 26 26 chr15 97851554 97851705 -5643269 - RSINE1 SINE B4 0 165 15 5 1331 288 0 0 0 chr15 97852409 97852441 -5642533 + (GA)n Simple_repeat Simple_repeat 1 32 0 5 1331 322 284 99 88 chr15 97852562 97852824 -5642150 - L1M5 LINE L1 -2854 3292 3028 5 1331 1241 84 0 11 chr15 97852827 97853008 -5641966 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 5 1331 1162 93 3 9 chr15 97853010 97853347 -5641627 + (TTTC)n Simple_repeat Simple_repeat 1 334 0 5 1331 477 105 0 0 chr15 97853363 97853449 -5641525 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 5 1331 670 183 6 96 chr15 97853450 97853607 -5641367 - B1F SINE Alu -6 143 1 5 1331 227 103 0 25 chr15 97853914 97853954 -5641020 + (GGA)n Simple_repeat Simple_repeat 3 41 0 5 1331 381 278 140 57 chr15 97853972 97854135 -5640839 + L1MC4 LINE L1 1110 1275 -4940 5 1331 674 206 88 0 chr15 97854135 97854271 -5640703 + B1_Mus1 SINE Alu 1 148 0 5 1331 381 278 140 57 chr15 97854271 97854336 -5640638 + L1MC4 LINE L1 1276 1357 -4858 5 1331 924 199 86 10 chr15 97854337 97854535 -5640439 + B3 SINE B2 2 214 -2 5 1331 195 42 0 0 chr15 97854684 97854708 -5640266 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1331 195 333 0 0 chr15 97856666 97856726 -5638248 - MIRb SINE MIR -97 171 112 5 1331 369 0 0 0 chr15 97857377 97857418 -5637556 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1331 206 369 65 8 chr15 97858679 97858802 -5636172 + MIRc SINE MIR 69 198 -70 5 1331 890 248 30 23 chr15 97859487 97859751 -5635223 + L1MA5 LINE L1 5735 6000 -300 5 1331 1103 186 83 0 chr15 97859787 97859980 -5634994 + B3 SINE B2 6 214 -2 5 1331 198 0 0 0 chr15 97860502 97860524 -5634450 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 5 1331 488 316 38 12 chr15 97860531 97860691 -5634283 - B3A SINE B2 -31 167 4 5 1331 181 326 53 0 chr15 97861288 97861383 -5633591 + MIR3 SINE MIR 109 208 0 6 1331 657 69 0 0 chr15 97862457 97862544 -5632430 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 6 1331 1174 58 0 0 chr15 97862544 97862683 -5632291 - B1_Mus1 SINE Alu -9 139 1 6 1331 911 222 19 66 chr15 97863229 97863441 -5631533 - B3 SINE B2 -10 206 5 6 1331 373 309 25 41 chr15 97863509 97863680 -5631294 - MIR3 SINE MIR -83 193 22 6 1331 257 267 19 47 chr15 97864788 97864894 -5630080 + L2c LINE L2 3285 3387 0 6 1331 437 188 156 0 chr15 97866884 97866980 -5627994 + B1F1 SINE Alu 32 142 -7 6 1331 902 197 78 26 chr15 97867094 97867287 -5627687 + B3 SINE B2 1 203 -13 6 1331 465 90 0 0 chr15 97867299 97867366 -5627608 + (TATG)n Simple_repeat Simple_repeat 2 68 0 6 1331 248 286 54 0 chr15 97867453 97867509 -5627465 + ID_B1 SINE B4 150 208 -16 6 1331 476 82 27 0 chr15 97869028 97869101 -5625873 + (CATA)n Simple_repeat Simple_repeat 2 76 0 6 1331 28 29 0 0 chr15 97869207 97869242 -5625732 + AT_rich Low_complexity Low_complexity 1 35 0 6 1331 235 301 130 50 chr15 97870078 97870239 -5624735 - MLT-int LTR MaLR -830 905 732 6 1331 240 35 0 0 chr15 97870545 97870574 -5624400 + (TC)n Simple_repeat Simple_repeat 1 29 0 6 1331 192 213 20 41 chr15 97871580 97871629 -5623345 + L3 LINE CR1 1286 1333 -3156 6 1331 242 226 19 0 chr15 97871694 97871747 -5623227 + GA-rich Low_complexity Low_complexity 6 59 0 6 1331 198 250 0 0 chr15 97872441 97872497 -5622477 + (TATG)n Simple_repeat Simple_repeat 3 58 0 6 1331 710 187 64 14 chr15 97873755 97873896 -5621078 - B1_Mur1 SINE Alu -1 148 1 6 1331 1859 299 164 30 chr15 97873908 97873943 -5621031 + RCHARR1 DNA MER1_type 7 41 -933 6 1331 1154 115 55 6 chr15 97873943 97874126 -5620848 - B2_Mm2 SINE B2 -2 193 2 6 1331 1859 299 164 30 chr15 97874126 97874925 -5620049 + RCHARR1 DNA MER1_type 42 953 -21 6 1331 914 211 35 15 chr15 97874952 97875154 -5619820 - B3 SINE B2 -10 206 1 6 1331 378 0 0 0 chr15 97875497 97875539 -5619435 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1331 199 293 55 87 chr15 97876230 97876357 -5618617 + L2 LINE L2 612 734 -2685 6 1331 23 0 0 0 chr15 97876586 97876609 -5618365 + AT_rich Low_complexity Low_complexity 1 23 0 6 1331 264 30 0 0 chr15 97876668 97876701 -5618273 + (TA)n Simple_repeat Simple_repeat 1 33 0 6 1331 785 151 42 35 chr15 97876766 97876910 -5618064 + B1_Mus1 SINE Alu 3 147 -1 6 1331 407 295 30 15 chr15 97877059 97877193 -5617781 - B4A SINE B4 -154 138 3 6 1331 1069 122 25 46 chr15 97878008 97878042 -5616932 - B2_Mm1a SINE B2 0 193 161 6 1331 351 0 0 0 chr15 97878042 97878081 -5616893 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 6 1331 1069 122 25 46 chr15 97878081 97878243 -5616731 - B2_Mm1a SINE B2 -33 160 1 6 1331 248 254 28 14 chr15 97879165 97879237 -5615737 + CT-rich Low_complexity Low_complexity 6 78 0 6 1331 570 246 40 0 chr15 97879244 97879370 -5615604 - B1F SINE Alu -10 139 9 6 1331 36 23 0 0 chr15 97880396 97880439 -5614535 + AT_rich Low_complexity Low_complexity 1 43 0 6 1331 207 0 0 0 chr15 97881595 97881618 -5613356 + (TA)n Simple_repeat Simple_repeat 2 24 0 6 1331 1677 21 0 5 chr15 97881618 97881799 -5613175 - B2_Mm1a SINE B2 -11 182 2 6 1331 742 216 179 16 chr15 97881825 97882009 -5612965 - B3 SINE B2 -2 214 1 6 1331 224 303 67 0 chr15 97882770 97882859 -5612115 - ID_B1 SINE B4 -112 112 18 6 1331 298 237 0 0 chr15 97882799 97882867 -5612107 - ID2 SINE ID -6 77 10 6 1331 363 23 0 0 chr15 97883282 97883326 -5611648 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1331 390 371 137 3 chr15 97883477 97883791 -5611183 - L1M5 LINE L1 -3560 2586 2231 6 1331 568 215 40 45 chr15 97884030 97884155 -5610819 + MER33 DNA MER1_type 126 254 -70 6 1331 350 232 12 12 chr15 97884155 97884238 -5610736 - ID4 SINE ID 0 83 1 6 1331 568 215 40 45 chr15 97884238 97884312 -5610662 + MER33 DNA MER1_type 255 324 0 6 1331 580 206 34 14 chr15 97884712 97884860 -5610114 + B3 SINE B2 1 151 -65 6 1331 445 298 42 60 chr15 97884948 97885116 -5609858 - RSINE1 SINE B4 0 165 1 6 1331 737 51 10 0 chr15 97885119 97885217 -5609757 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 6 1331 1173 68 0 0 chr15 97886561 97886708 -5608266 - B1_Mus2 SINE Alu 0 147 1 6 1331 37 52 0 0 chr15 97888219 97888277 -5606697 + AT_rich Low_complexity Low_complexity 1 58 0 6 1331 594 209 36 7 chr15 97888455 97888595 -5606379 - B1_Mur1 SINE Alu -5 144 1 6 1331 486 49 0 0 chr15 97888973 97889034 -5605940 + (TCTA)n Simple_repeat Simple_repeat 1 61 0 6 1331 748 126 110 0 chr15 97889037 97889164 -5605810 - B1_Mur4 SINE Alu -7 143 3 6 1331 580 255 87 0 chr15 97889165 97889326 -5605648 - B3 SINE B2 -1 215 41 6 1331 577 190 367 0 chr15 97889998 97890156 -5604818 + B3 SINE B2 1 216 0 6 1331 2987 120 14 119 chr15 97890843 97891570 -5603404 + RMER6A LTR ERVK 63 756 0 6 1331 272 224 0 0 chr15 97891895 97891957 -5603017 + MIR SINE MIR 83 144 -124 6 1331 396 0 0 0 chr15 97892154 97892198 -5602776 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1331 274 346 19 0 chr15 97892287 97892394 -5602580 + L2a LINE L2 3286 3394 -32 6 1331 182 352 75 19 chr15 97892950 97893057 -5601917 - L2c LINE L2 -223 3164 3052 6 1331 417 20 0 0 chr15 97893384 97893434 -5601540 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1331 396 0 0 0 chr15 97893434 97893477 -5601497 + (GA)n Simple_repeat Simple_repeat 1 44 0 6 1331 295 271 143 20 chr15 97893537 97893635 -5601339 - B1F SINE Alu -35 114 5 6 1331 532 165 0 46 chr15 97894217 97894325 -5600649 + PB1D9 SINE Alu 2 104 -16 6 1331 243 0 0 0 chr15 97894335 97894362 -5600612 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1331 270 116 0 0 chr15 97894362 97894405 -5600569 + (CAAAC)n Simple_repeat Simple_repeat 2 44 0 6 1331 209 356 178 0 chr15 97894541 97894721 -5600253 + L2a LINE L2 3215 3426 0 6 1331 230 323 21 10 chr15 97894902 97894922 -5600052 + polypurine Low_complexity Low_complexity 4 23 0 6 1331 1298 27 0 0 chr15 97894922 97895069 -5599905 + B1_Mus2 SINE Alu 1 147 0 6 1331 230 323 21 10 chr15 97895069 97895145 -5599829 + GA-rich Low_complexity Low_complexity 24 101 0 6 1331 382 205 124 33 chr15 97896456 97896577 -5598397 + B1F1 SINE Alu 1 132 -17 6 1331 315 0 0 0 chr15 97898782 97898817 -5596157 + (TCCC)n Simple_repeat Simple_repeat 4 38 0 6 1331 438 290 113 31 chr15 97899280 97899304 -5595670 + L1MB1 LINE L1 3295 3316 -2830 6 1331 713 124 113 30 chr15 97899304 97899437 -5595537 + B1_Mus1 SINE Alu 5 148 0 6 1331 836 240 107 18 chr15 97899437 97899802 -5595172 + L1MB1 LINE L1 3317 3714 -2432 6 1331 486 178 19 47 chr15 97899810 97899916 -5595058 - B1_Mur3 SINE Alu 0 149 47 6 1331 304 259 144 15 chr15 97899923 97900146 -5594828 + L1MB1 LINE L1 3695 3943 -2200 6 1331 3219 192 93 134 chr15 97900644 97901707 -5593267 + RMER1B Other Other 44 1062 -4 6 1331 671 250 87 87 chr15 97901761 97901892 -5593082 + L1MB1 LINE L1 4033 4167 -1973 6 1331 1417 78 5 30 chr15 97901892 97902090 -5592884 + B2_Mm1t SINE B2 1 193 0 6 1331 671 250 87 87 chr15 97902090 97902234 -5592740 + L1MB1 LINE L1 4168 4308 -1832 6 1331 677 244 57 0 chr15 97902901 97903110 -5591864 + L1MB1 LINE L1 4413 4633 -1510 6 1331 367 306 9 27 chr15 97903131 97903242 -5591732 + PB1D10 SINE Alu 1 109 -8 6 1331 563 274 69 67 chr15 97903283 97903634 -5591340 + L1MB1 LINE L1 4635 5022 -1124 6 1331 668 241 148 111 chr15 97903745 97904102 -5590872 + L1MB1 LINE L1 5283 5666 -523 6 1331 1119 166 79 15 chr15 97904102 97904304 -5590670 + B3 SINE B2 2 216 0 6 1331 668 247 139 105 chr15 97904304 97904578 -5590396 + L1MB1 LINE L1 5667 5938 -374 6 1331 494 252 43 7 chr15 97904592 97904732 -5590242 + B1F SINE Alu 5 149 0 6 1331 309 100 0 0 chr15 97904732 97904782 -5590192 + (A)n Simple_repeat Simple_repeat 1 50 0 6 1331 220 71 0 0 chr15 97904782 97904810 -5590164 + (GGAAA)n Simple_repeat Simple_repeat 1 28 0 6 1331 508 306 55 73 chr15 97905594 97905883 -5589091 - B4 SINE B4 -8 284 1 6 1331 437 198 47 9 chr15 97906475 97906553 -5588421 + B3 SINE B2 2 83 -133 6 1331 1428 124 60 8 chr15 97906553 97906821 -5588153 + RMER4A LTR ERVK 1 282 -184 6 1331 496 222 40 0 chr15 97908057 97908156 -5586818 + PB1D10 SINE Alu 5 107 -10 6 1331 761 175 164 60 chr15 97909870 97910071 -5584903 + URR1A DNA MER1_type 4 225 -1 6 1331 1276 72 60 16 chr15 97910239 97910395 -5584579 + B2_Mm1a SINE B2 2 158 -35 6 1331 261 0 0 0 chr15 97910395 97910424 -5584550 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 6 1331 1276 72 60 16 chr15 97910424 97910450 -5584524 + B2_Mm1a SINE B2 159 192 -1 6 1331 351 319 24 24 chr15 97910460 97910627 -5584347 + Tigger12c DNA MER2_type 533 699 -35 6 1332 182 62 31 0 chr15 97910997 97911029 -5583945 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 6 1332 257 280 13 26 chr15 97912492 97912569 -5582405 - ID4_ SINE ID 0 83 8 6 1332 21 36 0 0 chr15 97913270 97913298 -5581676 + AT_rich Low_complexity Low_complexity 1 28 0 6 1332 3105 184 85 10 chr15 97913711 97914500 -5580474 + ORR1A3-int LTR MaLR 153 1000 -963 6 1332 717 103 70 23 chr15 97914779 97914908 -5580066 - ORR1A2-int LTR MaLR -1828 135 1 6 1332 2660 65 9 0 chr15 97914908 97915232 -5579742 - ORR1A2 LTR MaLR 0 327 1 6 1332 1366 66 44 0 chr15 97915758 97915940 -5579034 - B2_Mm1a SINE B2 -2 191 2 6 1332 26 0 0 0 chr15 97916004 97916030 -5578944 + AT_rich Low_complexity Low_complexity 1 26 0 6 1332 710 314 51 14 chr15 97916237 97916512 -5578462 + B4A SINE B4 1 285 -7 6 1332 230 297 217 8 chr15 97918233 97918362 -5576612 - Tigger7 DNA MER2_type -4 2487 2332 6 1332 2066 83 9 62 chr15 97918360 97918696 -5576278 - ORR1A2 LTR MaLR -9 318 1 6 1332 7259 97 24 7 chr15 97918696 97919859 -5575115 - ORR1A2-int LTR MaLR 0 1963 781 6 1332 419 165 58 12 chr15 97919814 97919900 -5575074 - MT2B LTR ERVL -344 257 168 6 1332 1308 95 0 26 chr15 97920336 97920531 -5574443 - B2_Mm2 SINE B2 -5 190 1 6 1332 869 212 126 11 chr15 97920540 97920731 -5574243 - B3 SINE B2 0 216 4 6 1332 1182 49 0 0 chr15 97920873 97921017 -5573957 + B1_Mus1 SINE Alu 2 145 -3 6 1332 210 71 0 0 chr15 97921017 97921045 -5573929 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 7 1332 585 156 0 11 chr15 97921651 97921742 -5573232 + B1_Mur3 SINE Alu 51 140 -9 7 1332 573 28 0 0 chr15 97921742 97921813 -5573161 + (CA)n Simple_repeat Simple_repeat 2 72 0 7 1332 190 333 10 29 chr15 97922316 97922418 -5572556 - L2c LINE L2 -34 3353 3254 7 1332 1044 82 7 52 chr15 97926253 97926408 -5568566 + B1_Mus1 SINE Alu 1 148 0 7 1332 273 309 62 61 chr15 97926654 97926982 -5567992 - ORR1E LTR MaLR -9 370 56 7 1332 208 95 23 23 chr15 97927013 97927056 -5567918 + (TTTTG)n Simple_repeat Simple_repeat 1 43 0 7 1332 1151 62 14 0 chr15 97927056 97927201 -5567773 - B1_Mus2 SINE Alu 0 147 1 7 1332 1038 160 25 44 chr15 97927452 97927655 -5567319 + B3 SINE B2 1 199 -17 7 1332 183 129 0 0 chr15 97928482 97928513 -5566461 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 7 1332 591 139 9 9 chr15 97928531 97928640 -5566334 + URR1B DNA MER1_type 89 197 -28 7 1332 254 292 43 70 chr15 97928854 97929112 -5565862 - RLTR15 LTR ERVK -5 354 104 7 1332 318 186 11 44 chr15 97929147 97929237 -5565737 - RLTR15 LTR ERVK -238 121 35 7 1332 277 217 50 0 chr15 97929464 97929524 -5565450 - ID4_ SINE ID -19 64 2 7 1332 315 99 348 18 chr15 97929591 97929703 -5565271 - B2_Mm2 SINE B2 0 195 47 7 1332 1399 73 11 0 chr15 97929750 97929927 -5565047 - B2_Mm1t SINE B2 -14 179 1 7 1332 1023 129 114 86 chr15 97929930 97930150 -5564824 + URR1A DNA MER1_type 1 226 0 7 1332 251 83 83 0 chr15 97930654 97930702 -5564272 + MER20 DNA MER1_type 118 169 -50 7 1332 1128 81 0 0 chr15 97931040 97931188 -5563786 - B1_Mus1 SINE Alu 0 148 1 7 1332 714 203 0 0 chr15 97931383 97931516 -5563458 - B1_Mur2 SINE Alu 0 149 17 7 1332 222 118 0 0 chr15 97931845 97931879 -5563095 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 7 1332 3833 142 26 51 chr15 97932139 97932903 -5562071 + RMER6A LTR ERVK 1 745 -11 7 1332 1458 218 85 14 chr15 97933380 97933743 -5561231 - MTD LTR MaLR -2 417 29 7 1332 561 152 161 0 chr15 97933764 97933882 -5561092 - B1_Mur4 SINE Alu -7 143 7 7 1332 587 291 52 0 chr15 97934575 97934747 -5560227 + B4A SINE B4 109 289 -3 7 1332 545 233 110 55 chr15 97936000 97936182 -5558792 - L1MC2 LINE L1 -111 6233 6042 7 1332 1732 171 32 25 chr15 97936187 97936698 -5558276 - RLTR20D LTR ERVK 0 568 1 7 1332 962 266 145 38 chr15 97936698 97937364 -5557610 - L1MC2 LINE L1 -302 6042 5278 7 1332 213 39 0 0 chr15 97937436 97937462 -5557512 + (CATA)n Simple_repeat Simple_repeat 3 28 0 7 1332 420 243 122 27 chr15 97937527 97937675 -5557299 - Lx8 LINE L1 -124 7349 7188 7 1332 310 289 24 0 chr15 97937867 97937962 -5557012 - Lx8 LINE L1 -561 6912 6811 7 1332 296 254 14 18 chr15 97938034 97938131 -5556843 - L1MC2 LINE L1 -858 5288 5193 7 1332 561 247 28 71 chr15 97940152 97940371 -5554603 - L1MA5 LINE L1 -365 5935 5658 7 1332 784 211 96 20 chr15 97940611 97940809 -5554165 - B3 SINE B2 0 216 4 7 1332 482 225 24 40 chr15 97941029 97941154 -5553820 - PB1 SINE Alu 0 127 5 7 1332 318 320 150 0 chr15 97941162 97941309 -5553665 - MER58B DNA MER1_type -172 169 1 7 1332 345 82 0 0 chr15 97941513 97941562 -5553412 + (TATG)n Simple_repeat Simple_repeat 1 49 0 7 1332 318 180 0 0 chr15 97941957 97942018 -5552956 + (TG)n Simple_repeat Simple_repeat 1 61 0 7 1332 1236 47 0 7 chr15 97943542 97943691 -5551283 + B1_Mus1 SINE Alu 1 148 0 7 1332 486 0 0 0 chr15 97943864 97943918 -5551056 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1332 553 296 19 101 chr15 97943947 97944054 -5550920 - B4A SINE B4 -46 246 161 7 1332 339 25 0 0 chr15 97944054 97944094 -5550880 + (CCCCCA)n Simple_repeat Simple_repeat 2 41 0 7 1332 553 296 19 101 chr15 97944094 97944193 -5550781 - B4A SINE B4 -132 160 58 7 1332 202 172 33 49 chr15 97944542 97944603 -5550371 + GA-rich Low_complexity Low_complexity 2 61 0 7 1332 375 216 40 0 chr15 97945399 97945473 -5549501 + ID_B1 SINE B4 86 162 -62 7 1332 254 268 115 11 chr15 97945473 97945486 -5549488 + B1_Mur3 SINE Alu 5 100 -49 7 1332 227 293 92 92 chr15 97945901 97946074 -5548900 - Kanga1b DNA Tc2 -385 394 222 7 1332 243 0 0 0 chr15 97947038 97947065 -5547909 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1332 449 285 51 7 chr15 97947075 97947213 -5547761 - Charlie4z DNA MER1_type -20 147 4 7 1332 207 274 20 0 chr15 97947557 97947608 -5547366 + L2a LINE L2 3346 3397 -29 7 1332 213 154 0 25 chr15 97947697 97947737 -5547237 + GA-rich Low_complexity Low_complexity 2 40 0 7 1332 315 49 0 0 chr15 97948124 97948165 -5546809 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1332 663 173 46 86 chr15 97949224 97949376 -5545598 + B1_Mur1 SINE Alu 2 147 -2 7 1332 1036 60 97 0 chr15 97949380 97949514 -5545460 + B1_Mus1 SINE Alu 2 148 0 7 1332 334 245 20 41 chr15 97949527 97949625 -5545349 + L1MEg LINE L1 1857 1952 -4132 7 1332 249 264 30 99 chr15 97951323 97951424 -5543550 + MER45B DNA Tip100 338 431 -609 7 1332 1141 155 125 0 chr15 97952028 97952228 -5542746 - URR1A DNA MER1_type 0 226 2 7 1332 313 331 87 35 chr15 97956342 97956514 -5538460 - MER5A DNA MER1_type -1 188 8 7 1332 924 136 7 26 chr15 97957633 97957784 -5537190 - B1_Mur4 SINE Alu -2 148 1 7 1332 227 247 49 88 chr15 97958011 97958113 -5536861 - MLT-int LTR MaLR -938 797 700 7 1332 2217 146 21 34 chr15 97960401 97960784 -5534190 - ORR1C2 LTR MaLR 0 384 7 7 1332 414 134 0 0 chr15 97961347 97961414 -5533560 + (TATG)n Simple_repeat Simple_repeat 2 68 0 7 1332 295 277 79 18 chr15 97963639 97963753 -5531221 - MIRb SINE MIR -38 230 110 7 1332 1103 86 29 0 chr15 97963806 97963946 -5531028 + B1_Mur3 SINE Alu 1 144 -5 7 1332 1010 218 19 15 chr15 97963959 97964164 -5530810 - B3 SINE B2 0 216 11 7 1332 21 0 0 0 chr15 97964360 97964381 -5530593 + AT_rich Low_complexity Low_complexity 1 21 0 7 1332 228 100 0 0 chr15 97965427 97965467 -5529507 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 7 1332 1405 194 148 45 chr15 97967386 97967743 -5527231 - ORR1B1 LTR MaLR 0 394 1 7 1332 6076 203 55 144 chr15 97967743 97968831 -5526143 - ORR1B1-int LTR MaLR 0 1963 935 7 1332 1263 35 0 0 chr15 97968831 97968973 -5526001 - B1_Mus1 SINE Alu -5 143 2 7 1332 6076 203 55 144 chr15 97968973 97970040 -5524934 - ORR1B1-int LTR MaLR -1029 934 1 7 1332 2025 153 97 8 chr15 97970040 97970402 -5524572 - ORR1B1 LTR MaLR 0 394 1 7 1332 1272 87 43 0 chr15 97970718 97970902 -5524072 - B2_Mm1t SINE B2 0 193 2 7 1332 374 274 104 0 chr15 97970908 97971014 -5523960 - MIR SINE MIR -118 144 28 7 1332 361 286 18 54 chr15 97971038 97971149 -5523825 - PB1D10 SINE Alu -10 107 1 7 1332 225 268 115 58 chr15 97971318 97971405 -5523569 - L4 LINE RTE -589 1440 1349 7 1332 461 193 0 24 chr15 97972180 97972265 -5522709 + B3A SINE B2 3 85 -113 7 1332 292 295 0 0 chr15 97972970 97973048 -5521926 + C-rich Low_complexity Low_complexity 1 78 0 7 1332 240 35 0 0 chr15 97973455 97973484 -5521490 + (TC)n Simple_repeat Simple_repeat 2 30 0 7 1332 1251 41 0 0 chr15 97973500 97973646 -5521328 - B1_Mus2 SINE Alu 0 147 2 7 1332 1633 57 0 0 chr15 97974035 97974227 -5520747 - B2_Mm1t SINE B2 0 193 2 7 1332 1208 42 7 7 chr15 97974610 97974755 -5520219 + B1_Mus2 SINE Alu 2 146 -1 7 1332 218 200 22 0 chr15 97974809 97974854 -5520120 + L2a LINE L2 3373 3418 -8 7 1332 528 16 0 0 chr15 97976557 97976618 -5518356 + (TC)n Simple_repeat Simple_repeat 1 61 0 7 1332 4171 67 44 9 chr15 97976858 97977399 -5517575 + LTRIS2 LTR ERV1 5 564 0 7 1332 33 0 0 0 chr15 97977647 97977680 -5517294 + AT_rich Low_complexity Low_complexity 1 33 0 7 1332 1233 34 7 0 chr15 97977778 97977925 -5517049 + B1_Mus1 SINE Alu 1 148 0 7 1332 246 329 0 26 chr15 97978846 97978924 -5516050 + LTR78 LTR ERV1 737 812 -492 7 1332 225 343 77 123 chr15 97979049 97979375 -5515599 + LTR78 LTR ERV1 980 1290 -14 7 1332 842 89 0 0 chr15 97980308 97980420 -5514554 - B1_Mur4 SINE Alu -5 145 34 7 1332 205 319 54 22 chr15 97980484 97980619 -5514355 + MIR SINE MIR 93 237 -31 7 1332 423 143 114 25 chr15 97980636 97980715 -5514259 + MTC LTR MaLR 35 120 -301 7 1332 356 293 48 8 chr15 97980717 97980841 -5514133 - L1M5 LINE L1 -2946 3200 3072 7 1332 1192 61 7 0 chr15 97980843 97980991 -5513983 - B1_Mur3 SINE Alu 0 149 1 7 1332 4458 208 77 29 chr15 97980999 97981306 -5513668 + Lx7 LINE L1 6242 6569 -1127 7 1332 891 268 113 38 chr15 97981306 97981483 -5513491 + RLTR16 LTR ERVK 1 176 -329 7 1332 392 0 21 0 chr15 97981483 97981531 -5513443 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 1332 891 268 113 38 chr15 97981531 97981732 -5513242 + RLTR16 LTR ERVK 177 411 -94 7 1332 387 0 0 0 chr15 97981732 97981775 -5513199 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 1332 891 268 113 38 chr15 97981775 97981865 -5513109 + RLTR16 LTR ERVK 412 503 -2 7 1332 4458 208 77 29 chr15 97981865 97982664 -5512310 + Lx7 LINE L1 6570 7401 -295 7 1332 1172 108 13 37 chr15 97982664 97982873 -5512101 - B2_Mm2 SINE B2 0 216 1 7 1332 560 192 129 27 chr15 97982881 97983106 -5511868 + Lx7 LINE L1 7449 7696 0 7 1332 579 227 198 11 chr15 97983148 97983335 -5511639 + MTC LTR MaLR 199 420 -1 7 1332 328 204 211 22 chr15 97984053 97984200 -5510774 - URR1B DNA MER1_type 0 225 7 7 1332 693 36 0 0 chr15 97984404 97984488 -5510486 + (TATATG)n Simple_repeat Simple_repeat 4 87 0 7 1332 1688 169 106 80 chr15 97984674 97985099 -5509875 - RMER6C LTR ERVK -243 447 12 7 1332 252 336 82 79 chr15 97985185 97985366 -5509608 - L2 LINE L2 -435 2984 2821 7 1332 1464 56 17 0 chr15 97985366 97985544 -5509430 - B2_Mm2 SINE B2 -14 181 1 7 1332 252 336 82 79 chr15 97985544 97985740 -5509234 - L2 LINE L2 -599 2820 2606 7 1332 230 325 59 42 chr15 97985880 97985999 -5508975 - L2b LINE L2 -8 3367 3247 7 1332 504 0 0 0 chr15 97986211 97986267 -5508707 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 1332 656 213 94 0 chr15 97986267 97986394 -5508580 - B1_Mur2 SINE Alu -10 139 1 7 1332 2046 98 115 142 chr15 97986435 97986877 -5508097 + RLTR23 LTR ERV1 1 430 0 7 1332 1264 7 7 13 chr15 97987064 97987213 -5507761 + B1_Mus1 SINE Alu 1 148 0 8 1332 477 50 0 0 chr15 97987536 97987596 -5507378 + (TG)n Simple_repeat Simple_repeat 1 60 0 8 1332 1431 261 69 68 chr15 97987604 97988249 -5506725 - RLTR18B LTR ERVK -25 591 1 8 1332 246 128 0 0 chr15 97988706 97988745 -5506229 + (T)n Simple_repeat Simple_repeat 1 39 0 8 1332 760 168 0 0 chr15 97988771 97988890 -5506084 - B1_Mus1 SINE Alu -28 120 2 8 1332 794 171 81 27 chr15 97989020 97989262 -5505712 - RMER4B LTR ERVK 0 585 279 8 1332 951 153 0 0 chr15 97989358 97989502 -5505472 - B1_Mus1 SINE Alu 0 148 5 8 1332 316 248 99 92 chr15 97989562 97989704 -5505270 + L1MEc LINE L1 1782 1924 -4476 8 1332 881 155 0 0 chr15 97989707 97989836 -5505138 + B1_Mur2 SINE Alu 1 129 -20 8 1332 399 241 0 108 chr15 97990214 97990344 -5504630 - B3 SINE B2 0 216 101 8 1332 771 201 86 29 chr15 97990335 97990509 -5504465 + B3 SINE B2 33 216 0 8 1332 285 353 80 5 chr15 97990682 97990870 -5504104 + L1MEc LINE L1 2845 3046 -3273 8 1332 365 235 71 0 chr15 97990986 97991071 -5503903 + MTC LTR MaLR 331 421 0 8 1332 509 175 333 0 chr15 97991372 97991449 -5503525 + Lx9 LINE L1 7386 7464 -180 8 1332 396 0 0 0 chr15 97991449 97991493 -5503481 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1332 509 175 333 0 chr15 97991493 97991604 -5503370 + Lx9 LINE L1 7465 7636 -8 8 1332 180 0 0 0 chr15 97991851 97991871 -5503103 + (TG)n Simple_repeat Simple_repeat 1 20 0 8 1332 763 142 10 8 chr15 97992257 97992389 -5502585 + B1_Mur4 SINE Alu 6 149 -1 8 1332 392 161 287 0 chr15 97993262 97993349 -5501625 + RSINE1 SINE B4 16 127 -38 8 1332 261 0 0 0 chr15 97993385 97993414 -5501560 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 8 1332 826 59 0 0 chr15 97993428 97993530 -5501444 + B1_Mus2 SINE Alu 42 143 -4 8 1332 204 67 0 0 chr15 97993532 97993562 -5501412 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 8 1332 207 0 0 0 chr15 97993575 97993598 -5501376 + (CTAA)n Simple_repeat Simple_repeat 2 24 0 8 1332 290 241 79 22 chr15 97993614 97993703 -5501271 + MT2B2 LTR ERVL 161 254 -330 8 1332 335 232 122 0 chr15 97993626 97993708 -5501266 + PB1D10 SINE Alu 13 104 -13 8 1332 1012 228 167 40 chr15 97993911 97994282 -5500692 - MTD-int LTR MaLR -811 447 30 8 1332 955 259 71 117 chr15 97994343 97994572 -5500402 - MTD LTR MaLR -2 417 210 8 1332 1159 62 7 0 chr15 97994572 97994718 -5500256 - B1_Mus2 SINE Alu 0 147 1 8 1332 955 259 71 117 chr15 97994718 97994778 -5500196 - MTD LTR MaLR -210 209 152 8 1332 2441 76 38 0 chr15 97994778 97995093 -5499881 + ORR1A2 LTR MaLR 1 327 0 8 1332 955 259 71 117 chr15 97995093 97995239 -5499735 - MTD LTR MaLR -268 151 1 8 1332 189 411 18 9 chr15 97997521 97997634 -5497340 - L2a LINE L2 -8 3418 3305 8 1332 390 21 0 0 chr15 97997749 97997796 -5497178 + (T)n Simple_repeat Simple_repeat 1 47 0 8 1332 453 19 0 0 chr15 98001149 98001203 -5493771 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1332 234 268 0 99 chr15 98001472 98001563 -5493411 - B3 SINE B2 -10 206 125 2 1332 292 317 79 0 chr15 98001615 98001716 -5493258 - B3A SINE B2 -86 112 4 2 1332 603 212 9 9 chr15 98001759 98001873 -5493101 - B1_Mur1 SINE Alu 0 149 36 3 1332 264 225 196 18 chr15 98002202 98002339 -5492635 - MIRc SINE MIR -70 198 37 4 1332 24 0 0 0 chr15 98002367 98002391 -5492583 + AT_rich Low_complexity Low_complexity 1 24 0 5 1332 599 257 60 40 chr15 98003385 98003636 -5491338 - RMER15 LTR ERVL -21 554 299 6 1332 450 0 0 0 chr15 98004717 98004767 -5490207 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 1332 943 85 62 0 chr15 98005191 98005320 -5489654 + B1_Mus1 SINE Alu 4 140 -8 8 1332 220 65 21 42 chr15 98005320 98005368 -5489606 + (CAA)n Simple_repeat Simple_repeat 2 48 0 9 1332 1401 62 17 0 chr15 98005567 98005743 -5489231 - B2_Mm2 SINE B2 -16 179 1 1 1332 709 316 177 22 chr15 98005906 98006527 -5488447 - Kanga1a DNA Tc2 -33 721 5 1 1332 586 209 17 9 chr15 98006541 98006657 -5488317 - PB1D9 SINE Alu -2 118 2 1 1332 1257 104 33 0 chr15 98006754 98006936 -5488038 + B2_Mm2 SINE B2 2 189 -6 1 1332 355 118 294 0 chr15 98007075 98007143 -5487831 + RLTR25A LTR ERVK 1016 1103 0 1 1332 836 176 170 5 chr15 98007949 98008143 -5486831 + URR1A DNA MER1_type 1 226 0 1 1332 615 266 19 0 chr15 98008543 98008697 -5486277 + B3A SINE B2 3 159 -39 1 1332 465 19 0 0 chr15 98008714 98008768 -5486206 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1332 528 220 11 5 chr15 98008784 98008903 -5486071 + B1_Mus2 SINE Alu 1 122 -25 1 1332 391 299 64 17 chr15 98009024 98009328 -5485646 + L1M5 LINE L1 5173 5485 -709 1 1332 292 257 13 26 chr15 98009672 98009748 -5485226 + ID4_ SINE ID 9 83 0 2 1332 187 322 22 22 chr15 98009928 98010017 -5484957 + L3 LINE CR1 2613 2701 -1788 2 1332 1228 64 12 0 chr15 98010307 98010478 -5484496 + (TTCC)n Simple_repeat Simple_repeat 4 176 0 2 1332 207 0 0 0 chr15 98010479 98010502 -5484472 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 2 1332 212 0 0 35 chr15 98010844 98010873 -5484101 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 2 1332 1184 102 140 15 chr15 98012150 98012350 -5482624 - URR1A DNA MER1_type -1 225 1 2 1332 198 295 71 40 chr15 98012703 98012802 -5482172 + L2c LINE L2 3078 3179 -208 2 1332 365 283 121 42 chr15 98012939 98013105 -5481869 - Lx8 LINE L1 -246 7227 7049 2 1332 1029 132 171 45 chr15 98013394 98013593 -5481381 + URR1B DNA MER1_type 2 225 0 2 1332 664 251 74 92 chr15 98013764 98014058 -5480916 + MER67C LTR ERV1 16 328 -383 2 1332 1376 81 38 0 chr15 98014058 98014243 -5480731 - B2_Mm1t SINE B2 0 193 2 3 1332 664 273 120 38 chr15 98014243 98014316 -5480658 + MER67C LTR ERV1 329 409 -302 2 1332 189 171 0 0 chr15 98014691 98014726 -5480248 + C-rich Low_complexity Low_complexity 2 36 0 3 1332 862 264 106 25 chr15 98014877 98015206 -5479768 - Lx8 LINE L1 -1642 5831 5433 2 1332 573 98 0 24 chr15 98015498 98015582 -5479392 - B1_Mur2 SINE Alu -3 146 65 3 1332 566 167 0 48 chr15 98015583 98015707 -5479267 - L1_Mur3 LINE L1 -409 5474 5355 3 1332 473 147 89 27 chr15 98015712 98015824 -5479150 + Lx9 LINE L1 7503 7621 -23 3 1332 640 296 176 26 chr15 98015832 98016017 -5478957 - L1_Mur3 LINE L1 -557 5323 5139 3 1332 895 102 73 0 chr15 98016017 98016154 -5478820 - B1_Mus1 SINE Alu -1 147 1 3 1332 640 296 176 26 chr15 98016154 98016388 -5478586 - L1_Mur3 LINE L1 -742 5138 4842 3 1332 452 336 63 97 chr15 98016400 98016784 -5478190 - MTEa LTR MaLR -4 375 23 3 1332 237 313 96 0 chr15 98017126 98017241 -5477733 - IAPLTR1a_Mm LTR ERVK -28 309 184 3 1332 3691 92 98 47 chr15 98018320 98018892 -5476082 + MT2B LTR ERVL 1 601 0 3 1332 225 0 0 0 chr15 98019900 98019925 -5475049 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1332 1327 93 22 0 chr15 98019966 98020148 -5474826 + B2_Mm1t SINE B2 1 186 -7 4 1332 1039 124 0 20 chr15 98020162 98020310 -5474664 + B1_Mur4 SINE Alu 1 145 -5 4 1332 711 220 34 97 chr15 98020451 98020617 -5474357 + B3A SINE B2 1 164 -31 4 1332 932 160 193 0 chr15 98020617 98020798 -5474176 + B3 SINE B2 1 216 0 4 1332 555 220 34 97 chr15 98020798 98020837 -5474137 + B2_Mm2 SINE B2 165 193 -2 4 1332 980 228 40 0 chr15 98020862 98021064 -5473910 - B3 SINE B2 -2 214 5 4 1332 200 103 33 33 chr15 98021137 98021197 -5473777 + A-rich Low_complexity Low_complexity 1 60 0 4 1332 697 232 58 6 chr15 98022523 98022679 -5472295 + B4A SINE B4 127 290 -2 4 1332 295 256 56 73 chr15 98022681 98022919 -5472055 + L1MA7 LINE L1 5258 5489 -811 4 1332 500 250 128 41 chr15 98022919 98023115 -5471859 + B3 SINE B2 2 214 -2 4 1332 609 232 29 82 chr15 98023121 98023328 -5471646 + B3A SINE B2 2 197 -1 4 1332 25 0 0 0 chr15 98023337 98023362 -5471612 + AT_rich Low_complexity Low_complexity 1 25 0 5 1332 1232 328 65 33 chr15 98023377 98024103 -5470871 + L1MA7 LINE L1 5492 6240 -51 4 1332 292 270 0 0 chr15 98024111 98024174 -5470800 + ID2 SINE ID 5 67 -16 5 1332 317 256 0 55 chr15 98024237 98024328 -5470646 - B1_Mus1 SINE Alu -23 125 40 5 1332 4621 199 68 37 chr15 98026286 98026599 -5468375 - Lx9 LINE L1 -197 7447 7141 5 1332 1337 110 5 0 chr15 98026599 98026790 -5468184 - B2_Mm1a SINE B2 0 193 2 5 1332 4621 199 68 37 chr15 98026790 98027319 -5467655 - Lx9 LINE L1 -504 7140 6582 5 1332 3184 61 36 0 chr15 98027319 98027712 -5467262 + MTB_Mm LTR MaLR 1 407 0 5 1332 4621 199 68 37 chr15 98027712 98027920 -5467054 - Lx9 LINE L1 -1063 6581 6364 5 1332 1226 0 0 72 chr15 98027944 98028137 -5466837 + (TTCTCC)n Simple_repeat Simple_repeat 2 180 0 5 1332 652 72 71 24 chr15 98028165 98028335 -5466639 + CT-rich Low_complexity Low_complexity 2 179 0 5 1332 865 19 2 119 chr15 98028341 98028743 -5466231 + (TTCTCC)n Simple_repeat Simple_repeat 1 355 0 5 1332 333 0 0 0 chr15 98028831 98028868 -5466106 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 5 1332 937 99 113 7 chr15 98028869 98029011 -5465963 - B2_Mm2 SINE B2 -37 158 2 6 1332 1605 224 49 16 chr15 98029038 98029465 -5465509 - Lx9 LINE L1 -1513 6131 5691 5 1332 499 156 121 45 chr15 98029467 98029653 -5465321 - RMER4A LTR ERVK 0 466 240 6 1332 2398 147 33 2 chr15 98029658 98030055 -5464919 - RMER4A LTR ERVK 0 466 33 6 1332 519 17 0 0 chr15 98030055 98030115 -5464859 + (TC)n Simple_repeat Simple_repeat 1 60 0 6 1332 1472 159 123 7 chr15 98030115 98030145 -5464829 - RMER4A LTR ERVK -553 32 2 6 1332 1941 186 15 39 chr15 98030146 98030555 -5464419 - Lx9 LINE L1 -189 5658 5260 5 1332 1443 236 83 29 chr15 98030588 98030998 -5463976 - Lx2B LINE L1 -19 6981 6550 6 1332 659 213 201 10 chr15 98031002 98031224 -5463750 - L1_Rod LINE L1 -837 5306 4980 6 1332 2011 257 29 17 chr15 98031221 98031769 -5463205 - Lx6 LINE L1 -26 7434 6507 6 1332 186 43 0 0 chr15 98031779 98031802 -5463172 + (ATG)n Simple_repeat Simple_repeat 1 23 0 6 1332 354 119 17 0 chr15 98031820 98031879 -5463095 - Lx6 LINE L1 -1581 5879 5820 6 1332 1749 216 101 47 chr15 98031880 98032454 -5462520 - L1_Rod LINE L1 -854 4993 4389 6 1332 334 195 0 68 chr15 98032452 98032540 -5462434 + L1_Rod LINE L1 4295 4376 -1471 6 1332 1231 273 63 3 chr15 98033150 98033528 -5461446 + Lx8 LINE L1 6241 6641 -832 6 1332 804 136 2 2 chr15 98033817 98033968 -5461006 + MTB_Mm LTR MaLR 1 162 -259 7 1332 1368 334 45 14 chr15 98033968 98034481 -5460493 + Lx7 LINE L1 6640 7168 -528 7 1332 2873 164 51 32 chr15 98034505 98035034 -5459940 + RMER1B Other Other 400 938 -128 7 1332 598 299 0 22 chr15 98035045 98035223 -5459751 + L1M2 LINE L1 3611 3784 -2359 7 1332 1279 233 53 13 chr15 98035227 98035527 -5459447 + MTD LTR MaLR 108 419 0 7 1332 287 247 50 7 chr15 98036062 98036164 -5458810 - MER20 DNA MER1_type -605 178 76 7 1332 457 68 13 13 chr15 98036578 98036653 -5458321 + (CA)n Simple_repeat Simple_repeat 2 76 0 7 1332 1384 265 104 96 chr15 98036769 98037270 -5457704 + RLTR18B LTR ERVK 3 507 -5 7 1332 1915 107 20 94 chr15 98037348 98037700 -5457274 - ORR1A4 LTR MaLR -3 326 1 7 1332 227 152 0 21 chr15 98040060 98040107 -5454867 + GA-rich Low_complexity Low_complexity 3 48 0 7 1332 593 61 12 0 chr15 98040849 98040931 -5454043 + (TCTA)n Simple_repeat Simple_repeat 2 84 0 8 1332 600 208 184 0 chr15 98040931 98041160 -5453814 - MT2A LTR ERVL -73 460 190 8 166 1830 130 122 79 chr15 98041607 98042049 -5452925 + RMER6B LTR ERVK 1 461 0 8 1333 2116 200 54 60 chr15 98042255 98042770 -5452204 + RLTR18B LTR ERVK 1 512 0 8 1333 315 0 0 0 chr15 98043231 98043266 -5451708 + (A)n Simple_repeat Simple_repeat 1 35 0 8 1333 850 286 107 28 chr15 98043331 98043723 -5451251 + L1M2 LINE L1 5317 5739 -552 8 1333 1508 181 30 51 chr15 98044259 98044591 -5450383 + RMER5 LTR ERV1 17 341 -193 8 1333 2196 121 29 15 chr15 98044598 98044941 -5450033 - MTC LTR MaLR -18 403 56 8 1333 776 147 83 14 chr15 98045040 98045185 -5449789 + Lx4A LINE L1 6789 6943 -115 8 1333 198 0 0 0 chr15 98045275 98045297 -5449677 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 8 1333 23 0 0 0 chr15 98045363 98045386 -5449588 + AT_rich Low_complexity Low_complexity 1 23 0 9 1333 795 222 42 5 chr15 98045800 98045990 -5448984 - B3A SINE B2 -1 197 1 9 1333 277 114 45 0 chr15 98046975 98047019 -5447955 + RLTR6-int LTR ERV1 5002 5047 -2731 9 1333 225 0 0 0 chr15 98048878 98048903 -5446071 + (CAA)n Simple_repeat Simple_repeat 3 27 0 9 1333 421 179 70 78 chr15 98049139 98049254 -5445720 + URR1B DNA MER1_type 112 225 0 9 1333 2153 331 35 6 chr15 98049346 98050151 -5444823 + Lx8 LINE L1 6451 7278 -195 9 1333 204 40 0 0 chr15 98050198 98050223 -5444751 + (TAA)n Simple_repeat Simple_repeat 3 27 0 9 1333 1145 76 0 0 chr15 98050226 98050371 -5444603 + B1_Mus1 SINE Alu 3 147 -1 9 1333 521 238 43 87 chr15 98050392 98050411 -5444563 + B4 SINE B4 70 81 -211 9 1333 1075 103 0 0 chr15 98050411 98050556 -5444418 + B1_Mus1 SINE Alu 4 148 0 9 1333 1850 131 35 77 chr15 98052163 98052503 -5442471 + ORR1A3 LTR MaLR 1 326 0 1 1333 219 65 0 0 chr15 98052527 98052536 -5442438 + (T)n Simple_repeat Simple_repeat 1 9 0 1 1333 1052 105 7 0 chr15 98052536 98052679 -5442295 - B1_Mus2 SINE Alu 0 147 4 1 1333 219 65 0 0 chr15 98052679 98052700 -5442274 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1333 1631 173 88 70 chr15 98052928 98053314 -5441660 + MTD LTR MaLR 13 405 -14 1 1333 656 12 12 0 chr15 98053600 98053681 -5441293 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 1 1333 426 39 0 0 chr15 98053696 98053748 -5441226 + (TATG)n Simple_repeat Simple_repeat 4 55 0 1 1333 333 248 104 9 chr15 98053750 98053856 -5441118 - ID_B1 SINE B4 -7 217 102 1 1333 465 103 0 0 chr15 98053977 98054045 -5440929 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 1333 686 331 48 14 chr15 98054197 98054568 -5440406 + L1MA6 LINE L1 5915 6298 -2 1 1333 562 165 58 0 chr15 98054586 98054689 -5440285 + PB1D9 SINE Alu 12 120 0 1 1333 1418 62 17 0 chr15 98054767 98054944 -5440030 - B2_Mm2 SINE B2 -14 181 2 1 1333 367 191 9 39 chr15 98054987 98055077 -5439897 + B1_Mus1 SINE Alu 1 83 -66 1 1333 853 176 179 11 chr15 98055629 98055813 -5439161 - B3 SINE B2 0 216 2 1 1333 381 315 94 36 chr15 98055907 98056353 -5438621 - Lx8 LINE L1 -5 7468 6869 1 1333 1054 192 102 4 chr15 98056564 98056789 -5438185 + ORR1B2 LTR MaLR 118 364 -3 1 1333 814 304 183 15 chr15 98058134 98058479 -5436495 - MTD LTR MaLR -16 403 1 1 1333 540 0 0 0 chr15 98058722 98058782 -5436192 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 1333 292 251 97 51 chr15 98058787 98058963 -5436011 - L1MC1 LINE L1 -29 6304 6121 1 1333 418 255 100 81 chr15 98059028 98059288 -5435686 + B4 SINE B4 9 273 -19 1 1333 394 205 73 8 chr15 98059396 98059519 -5435455 - MER63D DNA AcHobo -845 216 86 1 1333 457 129 116 21 chr15 98059737 98059832 -5435142 - MTD LTR MaLR -315 104 1 1 1333 1353 269 88 25 chr15 98059839 98060277 -5434697 + Lx8 LINE L1 6756 7216 -257 1 1333 492 18 0 0 chr15 98060277 98060334 -5434640 + (GA)n Simple_repeat Simple_repeat 1 57 0 1 1333 1353 269 88 25 chr15 98060334 98060372 -5434602 + Lx8 LINE L1 7217 7261 -212 1 1333 243 302 162 15 chr15 98060587 98060776 -5434198 + MIRc SINE MIR 50 255 -13 1 1333 648 345 111 5 chr15 98061573 98061952 -5433022 + Lx8 LINE L1 6723 7141 -332 1 1333 531 0 0 0 chr15 98063524 98063583 -5431391 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1333 198 0 0 0 chr15 98064732 98064754 -5430220 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 1333 3434 255 79 43 chr15 98064998 98066101 -5428873 - Lx8 LINE L1 0 7473 6332 1 1333 931 52 15 7 chr15 98066168 98066303 -5428671 - B1_Mus2 SINE Alu 0 147 12 1 1333 738 269 80 94 chr15 98066306 98066679 -5428295 - L1_Mur3 LINE L1 -2927 2953 2586 1 1333 506 333 0 0 chr15 98066717 98066855 -5428119 - RSINE1 SINE B4 0 165 28 1 1333 350 203 183 17 chr15 98066858 98066978 -5427996 - L1_Mur3 LINE L1 -3279 2601 2462 1 1333 389 135 0 26 chr15 98067027 98067103 -5427871 + CT-rich Low_complexity Low_complexity 5 78 0 1 1333 2838 212 25 35 chr15 98067188 98068168 -5426806 + Lx5 LINE L1 6166 7043 -7 1 1333 1093 311 52 67 chr15 98068185 98069228 -5425746 - L1_Mur3 LINE L1 -3407 2473 1447 1 1333 2509 143 34 2 chr15 98069239 98069647 -5425327 - MTC LTR MaLR 0 421 1 1 1333 23 0 0 0 chr15 98069678 98069701 -5425273 + AT_rich Low_complexity Low_complexity 1 23 0 1 1333 4401 189 51 20 chr15 98069701 98070565 -5424409 - Lx5 LINE L1 0 7050 6160 1 1333 6056 155 27 31 chr15 98070565 98070741 -5424233 - MTC-int LTR MaLR -44 1214 1052 1 1333 276 30 0 0 chr15 98070741 98070774 -5424200 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 1333 6056 155 27 31 chr15 98070774 98070812 -5424162 - MTC-int LTR MaLR -207 1051 1014 1 1333 414 0 0 0 chr15 98070812 98070858 -5424116 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 1333 6056 155 27 31 chr15 98070858 98071861 -5423113 - MTC-int LTR MaLR -245 1013 1 1 1333 2190 154 3 3 chr15 98071884 98072249 -5422725 - MTC LTR MaLR -52 369 5 1 1333 510 296 120 31 chr15 98072329 98072713 -5422261 - L1_Rod LINE L1 -6265 907 490 1 1333 3199 49 15 5 chr15 98072721 98073113 -5421861 - MTA_Mm LTR MaLR 0 396 1 1 1333 9168 45 4 0 chr15 98073113 98074207 -5420767 - MTA_Mm-int LTR MaLR 0 1098 1 1 1333 3474 15 8 5 chr15 98074207 98074602 -5420372 - MTA_Mm LTR MaLR 0 396 1 1 1333 325 129 330 9 chr15 98074607 98074719 -5420255 - B2_Mm2 SINE B2 -1 194 47 1 1333 1250 113 11 0 chr15 98074770 98074947 -5420027 - B2_Mm1t SINE B2 -14 179 1 1 1333 585 235 51 15 chr15 98075669 98075846 -5419128 + Lx6 LINE L1 7179 7297 -163 1 1333 285 140 0 0 chr15 98075972 98076029 -5418945 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1333 786 261 60 0 chr15 98076042 98076241 -5418733 - B4 SINE B4 0 292 82 1 1333 278 129 330 35 chr15 98076357 98076469 -5418505 - B2_Mm2 SINE B2 -4 191 47 1 1333 640 124 19 0 chr15 98076535 98076640 -5418334 - B2_Mm1t SINE B2 -14 179 73 1 1333 1331 189 143 6 chr15 98076757 98077071 -5417903 + ORR1D1 LTR MaLR 17 373 -1 1 1333 776 281 9 28 chr15 98077073 98077289 -5417685 + B4A SINE B4 22 233 -59 1 1333 330 195 0 54 chr15 98077289 98077381 -5417593 + Lx2 LINE L1 6907 6993 -4 1 1333 349 234 26 13 chr15 98077762 98077840 -5417134 + ID4_ SINE ID 5 83 0 1 1333 414 39 0 0 chr15 98077841 98077893 -5417081 + (TGGGGG)n Simple_repeat Simple_repeat 3 54 0 1 1333 415 254 249 0 chr15 98077904 98078046 -5416928 + B3 SINE B2 1 177 -39 1 1333 276 77 0 0 chr15 98078046 98078085 -5416889 + (CATA)n Simple_repeat Simple_repeat 4 42 0 1 1333 415 254 249 0 chr15 98078085 98078115 -5416859 + B3 SINE B2 178 215 -1 1 1333 23 0 0 0 chr15 98079051 98079074 -5415900 + AT_rich Low_complexity Low_complexity 1 23 0 1 1333 3993 82 7 70 chr15 98079551 98080154 -5414820 - RMER2 LTR ERV1 -2 565 1 1 1333 1006 263 35 19 chr15 98080530 98080786 -5414188 - Lx5 LINE L1 -1 7049 6790 1 1333 238 312 0 25 chr15 98081251 98081330 -5413644 - ID2 SINE ID -2 81 5 1 1333 375 23 0 0 chr15 98081335 98081379 -5413595 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1333 996 116 0 0 chr15 98081379 98081525 -5413449 - B2_Mm2 SINE B2 -48 147 2 1 1333 2417 223 65 32 chr15 98081526 98082677 -5412297 - L1_Mur3 LINE L1 -4161 1719 523 1 1333 802 222 88 1 chr15 98082797 98083042 -5411932 + ORR1D2 LTR MaLR 85 365 -9 1 1333 258 159 28 113 chr15 98083254 98083325 -5411649 + RMER15 LTR ERVL 4 68 -507 1 1333 298 172 83 83 chr15 98083349 98083457 -5411517 + RMER15 LTR ERVL 22 129 -446 1 1333 1721 192 59 8 chr15 98083457 98083814 -5411160 + ORR1C1 LTR MaLR 3 377 -1 1 1333 4186 132 80 10 chr15 98084904 98085213 -5409761 + RMER6A LTR ERVK 3 358 -398 1 1333 321 26 0 0 chr15 98085213 98085251 -5409723 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 1333 4186 132 80 10 chr15 98085251 98085642 -5409332 + RMER6A LTR ERVK 359 752 -4 1 1333 243 0 0 0 chr15 98085935 98085962 -5409012 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1333 244 193 12 12 chr15 98086190 98086274 -5408700 - Lx4A LINE L1 0 7058 6975 1 1333 275 349 0 0 chr15 98086958 98087124 -5407850 + (CCCTAG)n Simple_repeat Simple_repeat 1 166 0 1 1333 217 0 29 29 chr15 98088232 98088266 -5406708 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 1 1333 3091 61 193 2 chr15 98088414 98088844 -5406130 - RLTR1B LTR ERV1 0 512 1 1 1333 578 264 50 0 chr15 98089162 98089302 -5405672 + B1F SINE Alu 1 147 -2 1 1333 1138 82 0 0 chr15 98089568 98089715 -5405259 + B1_Mm SINE Alu 1 147 0 1 1333 261 57 0 0 chr15 98089718 98089753 -5405221 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1333 211 280 20 0 chr15 98090100 98090150 -5404824 + polypurine Low_complexity Low_complexity 3 53 0 1 1333 198 231 0 0 chr15 98090184 98090249 -5404725 + G-rich Low_complexity Low_complexity 6 70 0 1 1333 402 284 166 0 chr15 98090307 98090464 -5404510 + L1MC LINE L1 3473 3653 -2493 1 1333 1001 266 100 6 chr15 98090464 98090793 -5404181 + MTE2a LTR MaLR 1 360 -19 1 1333 1464 34 0 0 chr15 98091295 98091473 -5403501 + (TTC)n Simple_repeat Simple_repeat 3 180 0 1 1333 234 91 0 0 chr15 98091473 98091506 -5403468 + (TCC)n Simple_repeat Simple_repeat 3 35 0 1 1333 783 93 8 0 chr15 98091863 98091981 -5402993 - ORR1A2 LTR MaLR 0 327 209 1 1333 401 310 82 27 chr15 98092312 98092531 -5402443 + MER90 LTR ERV1 147 377 -198 1 1333 212 223 0 10 chr15 98092593 98092697 -5402277 + CT-rich Low_complexity Low_complexity 2 104 0 1 1333 22 35 0 0 chr15 98092948 98092977 -5401997 + AT_rich Low_complexity Low_complexity 1 29 0 1 1333 2393 93 19 0 chr15 98093137 98093458 -5401516 + ORR1A2 LTR MaLR 1 327 0 1 1333 439 280 119 15 chr15 98093458 98093592 -5401382 - RSINE1 SINE B4 -15 150 3 1 1333 3848 150 45 46 chr15 98094678 98095524 -5399450 + RLTR22_Mur LTR ERVK 17 861 -987 1 1333 1023 85 0 0 chr15 98095563 98095704 -5399270 - B1_Mus1 SINE Alu -1 147 7 1 1333 1068 171 30 89 chr15 98095805 98096075 -5398899 + RLTR22_Mur LTR ERVK 1590 1843 -5 1 1333 234 0 0 0 chr15 98096354 98096380 -5398594 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1 1333 780 143 17 28 chr15 98096535 98096715 -5398259 + (TATATG)n Simple_repeat Simple_repeat 2 179 0 1 1333 256 62 0 0 chr15 98096715 98096747 -5398227 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 1333 645 14 0 0 chr15 98096918 98096992 -5397982 + (CA)n Simple_repeat Simple_repeat 2 75 0 1 1333 526 222 93 8 chr15 98097008 98097126 -5397848 + Lx7 LINE L1 6906 7033 -663 1 1333 477 34 0 0 chr15 98097193 98097252 -5397722 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 1 1333 211 118 62 31 chr15 98097278 98097374 -5397600 + T-rich Low_complexity Low_complexity 1 99 0 1 1333 34 42 0 0 chr15 98097479 98097527 -5397447 + AT_rich Low_complexity Low_complexity 1 48 0 1 1333 200 62 104 0 chr15 98097598 98097646 -5397328 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 1333 380 331 15 0 chr15 98097744 98097874 -5397100 + (CATG)n Simple_repeat Simple_repeat 3 134 0 1 1333 448 261 161 35 chr15 98098150 98098529 -5396445 + L1_Mur3 LINE L1 5349 5743 -137 2 1333 444 19 0 0 chr15 98098535 98098588 -5396386 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1333 334 227 0 0 chr15 98098621 98098696 -5396278 + RLTR24 LTR ERV1 1 75 -454 2 1333 477 260 116 32 chr15 98099391 98099546 -5395428 + RLTR19-int LTR ERVK 1142 1309 -4213 2 1333 331 216 91 0 chr15 98099647 98099735 -5395239 + RLTR14-int LTR ERV1 1284 1379 -3938 2 1333 1138 268 99 20 chr15 98099792 98100182 -5394792 + MTC-int LTR MaLR 469 990 -268 2 1333 539 250 7 35 chr15 98100182 98100323 -5394651 + RLTR14 LTR ERV1 1 137 -245 2 1333 392 280 53 88 chr15 98100351 98100692 -5394282 + RLTR15 LTR ERVK 1 329 -30 2 1333 1371 216 91 202 chr15 98100801 98101016 -5393958 + RLTR19-int LTR ERVK 2183 2330 -3807 2 1333 4046 78 2 9 chr15 98101016 98101543 -5393431 - Lx3_Mus LINE L1 0 7009 6487 2 1333 1371 216 91 202 chr15 98101543 98102273 -5392701 + RLTR19-int LTR ERVK 2331 3023 -3114 2 1333 823 243 24 92 chr15 98102708 98103002 -5391972 + RLTR19-int LTR ERVK 3774 4047 -2503 2 1333 4999 147 34 25 chr15 98103032 98103942 -5391032 - L1_Mur2 LINE L1 -592 5285 4368 2 1333 24 53 0 0 chr15 98104057 98104095 -5390879 + AT_rich Low_complexity Low_complexity 1 38 0 2 1333 683 317 89 30 chr15 98104203 98104564 -5390410 - Lx8 LINE L1 -129 7344 6963 2 1333 2160 156 20 70 chr15 98104565 98104757 -5390217 + MTC LTR MaLR 2 197 -224 2 1333 3208 46 15 15 chr15 98104757 98105157 -5389817 + MTB LTR MaLR 1 400 0 2 1333 2160 156 20 70 chr15 98105157 98105405 -5389569 + MTC LTR MaLR 198 420 -1 2 1333 6614 144 56 17 chr15 98105405 98106612 -5388362 + MTC-int LTR MaLR 2 1256 -2 2 1333 2014 182 15 3 chr15 98106614 98107026 -5387948 - Lx8 LINE L1 -54 5823 5469 2 1333 951 220 54 214 chr15 98107045 98107185 -5387789 - Lx7 LINE L1 -1750 5946 5791 2 1333 3121 148 6 37 chr15 98107185 98107731 -5387243 - Lx2 LINE L1 0 6997 6469 2 1333 349 106 136 0 chr15 98107732 98107798 -5387176 + B2_Mm2 SINE B2 9 83 -112 2 1333 2583 177 356 64 chr15 98107798 98108557 -5386417 - Lx7 LINE L1 -1906 5789 4750 2 1333 2288 99 15 9 chr15 98108557 98108884 -5386090 + ORR1A4 LTR MaLR 1 329 0 2 1333 2583 221 259 61 chr15 98108884 98109005 -5385969 - Lx7 LINE L1 -1131 4749 4603 2 1333 1138 215 99 0 chr15 98109039 98109341 -5385633 - Lx7 LINE L1 -2647 3233 2902 2 1333 740 61 0 0 chr15 98109478 98109576 -5385398 + B2_Mm2 SINE B2 1 98 -97 2 1333 9873 42 2 17 chr15 98109576 98111516 -5383458 - L1Md_F2 LINE L1 -3 6579 4677 2 1333 4057 234 62 34 chr15 98111524 98112722 -5382252 - Lx7 LINE L1 -2989 2891 1661 2 1333 308 183 0 0 chr15 98112722 98112782 -5382192 - Lx7 LINE L1 -4370 1510 1451 2 1333 589 249 106 98 chr15 98112947 98113242 -5381732 - L1M2 LINE L1 -2851 3698 3385 2 1333 453 36 0 0 chr15 98113242 98113297 -5381677 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1333 589 249 106 98 chr15 98113297 98113319 -5381655 - L1M2 LINE L1 -3165 3384 3377 2 1333 324 70 0 0 chr15 98113319 98113362 -5381612 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 1333 589 249 106 98 chr15 98113362 98113439 -5381535 - L1M2 LINE L1 -3173 3376 3300 2 1333 1048 275 106 24 chr15 98113633 98114047 -5380927 - L1M2 LINE L1 -3263 3286 2839 2 1333 469 252 48 40 chr15 98114049 98114234 -5380740 - L1M2 LINE L1 -3947 2602 2348 2 1333 252 226 0 0 chr15 98114247 98114309 -5380665 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 1333 228 149 64 0 chr15 98114316 98114363 -5380611 - MT2B LTR ERVL -233 368 319 2 1333 438 20 0 0 chr15 98114923 98114974 -5380000 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1333 204 130 91 18 chr15 98115441 98115496 -5379478 + GA-rich Low_complexity Low_complexity 3 61 0 2 1333 397 229 113 15 chr15 98115793 98115926 -5379048 + B3 SINE B2 68 213 -3 2 1333 230 0 33 0 chr15 98116522 98116552 -5378422 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2 1333 320 271 29 68 chr15 98116553 98116656 -5378318 - PB1D9 SINE Alu -13 107 9 2 1333 519 163 16 8 chr15 98118143 98118267 -5376707 + (TG)n Simple_repeat Simple_repeat 2 126 0 2 1333 885 158 0 0 chr15 98119857 98120034 -5374940 + (TG)n Simple_repeat Simple_repeat 2 178 0 2 1333 978 149 0 22 chr15 98120049 98120416 -5374558 + (TG)n Simple_repeat Simple_repeat 1 358 0 2 1333 381 22 0 0 chr15 98121039 98121085 -5373889 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1333 859 145 5 37 chr15 98122540 98122954 -5372020 + CT-rich Low_complexity Low_complexity 1 400 0 2 1333 470 295 0 0 chr15 98122957 98123079 -5371895 - PB1 SINE Alu -2 125 4 2 1333 468 202 141 0 chr15 98123864 98123963 -5371011 - PB1D7 SINE Alu -6 114 2 2 1333 1104 82 13 0 chr15 98125482 98125641 -5369333 + B2_Mm2 SINE B2 3 163 -32 2 1333 24 32 0 0 chr15 98126511 98126542 -5368432 + GC_rich Low_complexity Low_complexity 1 31 0 2 1333 369 0 0 0 chr15 98127760 98127801 -5367173 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 2 1333 207 0 0 0 chr15 98127939 98127962 -5367012 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2 1333 4493 182 26 18 chr15 98127962 98128806 -5366168 - Lx5 LINE L1 -5 7045 6195 2 1333 18418 104 39 22 chr15 98128817 98132202 -5362772 - L1_Mur2 LINE L1 -1630 4247 801 2 1333 22 70 0 0 chr15 98132705 98132748 -5362226 + AT_rich Low_complexity Low_complexity 1 43 0 2 1333 256 186 0 0 chr15 98132778 98132821 -5362153 + B2_Mm2 SINE B2 1 43 -152 2 1333 3099 101 2 19 chr15 98132875 98133387 -5361587 - RLTR1C LTR ERV1 0 605 1 2 1333 291 244 45 68 chr15 98133581 98133713 -5361261 + RLTR13D3 LTR ERVK 944 1072 -42 2 1333 238 279 42 31 chr15 98133826 98133922 -5361052 - L1_Mur2 LINE L1 -6452 260 164 2 1333 1200 68 0 0 chr15 98135000 98135146 -5359828 + B1_Mm SINE Alu 2 147 0 2 1333 429 90 0 0 chr15 98135146 98135213 -5359761 + (A)n Simple_repeat Simple_repeat 1 67 0 2 1333 7796 185 42 62 chr15 98135824 98138040 -5356934 + RMER3D-int LTR ERVK 163 2814 -28 2 1333 183 42 0 0 chr15 98138040 98138064 -5356910 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1333 7796 180 41 58 chr15 98138064 98138081 -5356893 + RMER3D-int LTR ERVK 2815 2836 -6 2 1333 2488 165 21 21 chr15 98138088 98138608 -5356366 + RLTR31_Mm LTR ERVK 3 522 -39 2 1333 2246 132 2 79 chr15 98138929 98139358 -5355616 + RMER2 LTR ERV1 172 567 0 2 1333 370 228 34 102 chr15 98139928 98140104 -5354870 - Lx6 LINE L1 0 7460 7297 2 1333 502 212 338 0 chr15 98140108 98140268 -5354706 - B3 SINE B2 0 216 3 2 1333 819 206 46 26 chr15 98140295 98140489 -5354485 - B3A SINE B2 0 198 1 2 1333 614 303 102 100 chr15 98140499 98140910 -5354064 + MER67D LTR ERV1 96 507 -7 2 1333 1061 77 21 0 chr15 98141404 98141547 -5353427 + B1_Mus1 SINE Alu 2 147 -1 2 1333 402 21 0 0 chr15 98141547 98141594 -5353380 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 2 1333 254 281 91 32 chr15 98141670 98141864 -5353110 - L1M4 LINE L1 -2469 3677 3473 2 1333 525 296 36 27 chr15 98141879 98142098 -5352876 + L1ME1 LINE L1 5470 5690 -489 2 1333 369 293 15 29 chr15 98142138 98142275 -5352699 + L1ME1 LINE L1 5865 5999 -180 2 1333 1196 136 16 0 chr15 98144145 98144336 -5350638 - B2_Mm2 SINE B2 0 195 2 2 1333 419 291 84 92 chr15 98145387 98145648 -5349326 - B4A SINE B4 0 292 34 2 1333 278 309 183 7 chr15 98145775 98145928 -5349046 + B3A SINE B2 3 182 -16 2 1333 342 0 0 0 chr15 98146743 98146781 -5348193 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1333 204 200 0 0 chr15 98146835 98146890 -5348084 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 1333 327 248 18 0 chr15 98146904 98147013 -5347961 + (TCTCTG)n Simple_repeat Simple_repeat 6 116 0 2 1333 603 0 0 0 chr15 98147266 98147333 -5347641 + (GA)n Simple_repeat Simple_repeat 2 68 0 2 1333 2476 180 25 31 chr15 98147969 98148683 -5346291 - Lx4B LINE L1 -12 6288 5539 2 1333 949 192 49 118 chr15 98148709 98149057 -5345917 - Lx8 LINE L1 0 7473 7150 2 1333 862 309 73 8 chr15 98149061 98149443 -5345531 + L1_Mur3 LINE L1 4905 5311 -569 2 1333 574 284 24 6 chr15 98149445 98149639 -5345335 - L1M2 LINE L1 -1835 4311 4113 2 1333 680 308 128 48 chr15 98149660 98150201 -5344773 - L1M2 LINE L1 -2271 3872 3292 2 1333 9840 69 3 17 chr15 98150207 98152135 -5342839 - L1Md_T LINE L1 -13 6569 4679 2 1333 2135 140 14 36 chr15 98152140 98152502 -5342472 - IAPEY2_LTR LTR ERVK -3 354 1 2 1333 21004 73 3 6 chr15 98152502 98155220 -5339754 - IAPEy-int LTR ERVK 0 7513 4804 2 1333 3538 158 34 2 chr15 98155220 98155837 -5339137 - IAPEY3-int LTR ERVK -6630 1050 414 2 1333 2293 125 0 9 chr15 98156273 98156619 -5338355 - IAPEY3-int LTR ERVK -7081 432 90 2 1333 27161 60 1 3 chr15 98156619 98159532 -5335442 - L1Md_A LINE L1 -1199 4684 1779 2 1333 2907 99 74 5 chr15 98159532 98159976 -5334998 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1333 27161 85 1 19 chr15 98159976 98161128 -5333846 - L1Md_A LINE L1 -4105 1778 651 2 1333 396 0 0 0 chr15 98161454 98161498 -5333476 + (A)n Simple_repeat Simple_repeat 1 44 0 2 1333 388 200 12 0 chr15 98161897 98161977 -5332997 - Lx9 LINE L1 -171 7473 7393 2 1333 1193 238 169 20 chr15 98161983 98162532 -5332442 - L1M2 LINE L1 -2991 3152 2522 2 1333 505 151 94 0 chr15 98162548 98162654 -5332320 - MTD LTR MaLR -12 407 292 2 1333 255 189 0 0 chr15 98162663 98162716 -5332258 - L1M2 LINE L1 -3735 2408 2356 2 1333 290 296 66 60 chr15 98162717 98162868 -5332106 + ORR1E LTR MaLR 1 152 -207 2 1333 1500 244 79 100 chr15 98163399 98163958 -5331016 - RMER15 LTR ERVL 0 575 29 2 1333 300 230 448 0 chr15 98164577 98164727 -5330247 + L1MA9 LINE L1 6096 6312 0 2 1333 1208 48 7 0 chr15 98165508 98165654 -5329320 - B1_Mus1 SINE Alu -1 147 1 2 1333 910 256 20 60 chr15 98166538 98166842 -5328132 + B4A SINE B4 2 292 0 2 1333 491 258 68 48 chr15 98167366 98167522 -5327452 + B3A SINE B2 2 152 -64 2 1333 347 41 0 20 chr15 98167522 98167572 -5327402 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1333 437 253 78 50 chr15 98167572 98167620 -5327354 + B3 SINE B2 153 211 -5 2 1333 680 217 77 26 chr15 98168237 98168393 -5326581 + Lx9 LINE L1 7064 7227 -417 2 1333 180 0 0 0 chr15 98168448 98168468 -5326506 + (CACCC)n Simple_repeat Simple_repeat 5 24 0 2 1333 1391 180 24 108 chr15 98168492 98168872 -5326102 - RMER19B LTR ERVK -247 655 308 2 1333 366 289 196 12 chr15 98168896 98169064 -5325910 + Lx9 LINE L1 7226 7424 -220 2 1333 565 333 87 46 chr15 98169236 98169673 -5325301 - MLT1E2 LTR MaLR -58 569 115 2 1333 491 0 17 0 chr15 98169840 98169899 -5325075 + (TTTTG)n Simple_repeat Simple_repeat 2 61 0 2 1333 378 0 0 0 chr15 98171806 98171848 -5323126 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1334 333 0 0 0 chr15 98173394 98173431 -5321543 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 1334 370 321 28 14 chr15 98173832 98173974 -5321000 + MLT1B LTR MaLR 210 353 -37 2 1334 663 224 0 88 chr15 98174078 98174249 -5320725 + RSINE1 SINE B4 4 159 -6 2 1334 456 272 131 17 chr15 98174620 98174796 -5320178 + B4 SINE B4 34 229 -63 2 1334 740 188 125 0 chr15 98174800 98174960 -5320014 + B3 SINE B2 30 209 -7 2 1334 795 205 40 59 chr15 98175829 98176031 -5318943 - B3A SINE B2 0 198 1 2 1334 510 96 0 0 chr15 98177768 98177841 -5317133 + (GGAA)n Simple_repeat Simple_repeat 4 76 0 2 1334 2017 154 105 16 chr15 98177856 98178286 -5316688 + L1_Mur2 LINE L1 2846 3313 -2564 2 1334 446 272 162 103 chr15 98178501 98178821 -5316153 + ORR1E LTR MaLR 1 339 -20 2 1334 1764 120 14 10 chr15 98178927 98179221 -5315753 + RMER4B LTR ERVK 1 295 -290 2 1334 191 82 0 115 chr15 98179230 98179326 -5315648 + (TTG)n Simple_repeat Simple_repeat 1 85 0 3 1334 425 239 88 0 chr15 98179379 98179492 -5315482 + RMER4B LTR ERVK 463 585 0 2 1334 1257 172 232 10 chr15 98179595 98179901 -5315073 - ORR1D1 LTR MaLR 0 374 1 3 1334 261 0 0 0 chr15 98179989 98180018 -5314956 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1334 439 312 83 7 chr15 98180028 98180173 -5314801 - RSINE1 SINE B4 -4 161 6 3 1334 1191 236 168 26 chr15 98180351 98180757 -5314217 + RMER15 LTR ERVL 27 491 -84 3 1334 1891 112 89 6 chr15 98180757 98181072 -5313902 - ORR1B1 LTR MaLR 0 394 54 3 1334 336 227 79 11 chr15 98181104 98181193 -5313781 + RMER15 LTR ERVL 481 575 0 3 1334 237 250 0 0 chr15 98181198 98181246 -5313728 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 3 1334 642 323 19 91 chr15 98181251 98181558 -5313416 - B4A SINE B4 -6 286 2 3 1334 573 264 58 26 chr15 98181568 98181794 -5313180 - L1M2 LINE L1 -3227 3615 3383 3 1334 718 278 97 11 chr15 98181816 98182165 -5312809 - L1M2 LINE L1 -3555 3290 2912 3 1334 2403 93 6 0 chr15 98182388 98182709 -5312265 + ORR1A2 LTR MaLR 5 327 0 3 1334 357 320 122 47 chr15 98182870 98183378 -5311596 - L1M2 LINE L1 -4171 2678 2133 3 1334 1132 298 14 107 chr15 98183538 98183915 -5311059 + MTE-int LTR MaLR 1 336 -1244 3 1334 2006 101 104 10 chr15 98183915 98184214 -5310760 - ORR1A2 LTR MaLR 0 327 1 3 1334 1132 298 14 107 chr15 98184214 98184321 -5310653 + MTE-int LTR MaLR 337 440 -1140 3 1334 2563 121 29 3 chr15 98184321 98184701 -5310273 + ORR1B1 LTR MaLR 5 394 0 3 1334 942 131 0 0 chr15 98184701 98184846 -5310128 - MTC LTR MaLR -276 145 1 3 1334 1200 80 0 4 chr15 98184854 98185118 -5309856 + (TTC)n Simple_repeat Simple_repeat 1 262 0 3 1334 406 278 50 34 chr15 98185123 98185302 -5309672 + MTEa LTR MaLR 1 182 -197 3 1334 320 295 0 25 chr15 98185302 98185382 -5309592 + G-rich Low_complexity Low_complexity 5 82 0 3 1334 577 276 83 5 chr15 98185384 98185588 -5309386 + MTEa LTR MaLR 160 379 0 3 1334 14722 55 7 4 chr15 98185639 98187575 -5307399 + L1Md_T LINE L1 3909 5586 -297 3 1334 9138 6 0 0 chr15 98187575 98188571 -5306403 + L1Md_T LINE L1 5587 6582 0 3 1334 799 287 45 5 chr15 98188584 98188724 -5306250 + L1MA5A LINE L1 5332 5466 -723 3 1334 4074 78 89 5 chr15 98188724 98189277 -5305697 - MT2B LTR ERVL -2 599 1 3 1334 799 270 176 9 chr15 98189277 98189659 -5305315 + L1MA5A LINE L1 5467 5930 -367 3 1334 376 307 96 7 chr15 98190922 98191204 -5303770 - L1MCa LINE L1 -4680 1828 1522 3 1334 2144 104 6 5 chr15 98191528 98191889 -5303085 - MTB_Mm-int LTR MaLR -808 450 1 3 1334 441 65 0 0 chr15 98191889 98191951 -5303023 - MTB_Mm LTR MaLR 0 407 346 3 1334 2230 85 0 9 chr15 98191951 98192273 -5302701 + ORR1A2 LTR MaLR 1 319 -8 3 1334 1323 87 0 0 chr15 98192277 98192461 -5302513 - MTB_Mm LTR MaLR -57 350 167 3 1334 862 121 0 8 chr15 98192566 98192699 -5302275 + B2_Mm2 SINE B2 1 132 -63 3 1334 824 260 30 5 chr15 98193152 98193349 -5301625 - B3 SINE B2 -7 209 8 3 1334 1844 231 31 14 chr15 98193369 98193877 -5301097 - L1_Rod LINE L1 -4118 1729 1213 3 1334 792 175 90 0 chr15 98193903 98194069 -5300905 + MT2A LTR ERVL 347 527 -6 3 1334 393 241 30 88 chr15 98194071 98194269 -5300705 + L1MA5A LINE L1 6098 6287 -4 3 1334 286 293 44 22 chr15 98194297 98194433 -5300541 + L1MB8 LINE L1 6018 6156 -22 3 1334 3913 146 0 8 chr15 98195222 98195836 -5299138 - L1_Mur2 LINE L1 -198 5679 5071 3 1334 2798 197 63 4 chr15 98195838 98196379 -5298595 + Lx2B LINE L1 6424 6996 -4 3 1334 912 295 118 20 chr15 98196381 98196890 -5298084 + L1M2 LINE L1 3602 4160 -1983 3 1334 1935 216 153 11 chr15 98196893 98197351 -5297623 + Lx9 LINE L1 6345 6867 -777 3 1334 1323 296 33 30 chr15 98197397 98197763 -5297211 + Lx7 LINE L1 6535 6892 -804 3 1334 474 18 0 0 chr15 98197763 98197818 -5297156 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 1334 1323 296 33 30 chr15 98197818 98197880 -5297094 + Lx7 LINE L1 6893 6963 -733 3 1334 985 223 68 5 chr15 98197925 98198132 -5296842 - MTD LTR MaLR 0 419 200 3 1334 234 174 0 0 chr15 98198167 98198213 -5296761 + (TGG)n Simple_repeat Simple_repeat 1 46 0 3 1334 893 176 28 0 chr15 98198214 98198356 -5296618 - B1_Mur4 SINE Alu -4 146 1 3 1334 806 283 21 25 chr15 98198382 98198625 -5296349 + Lx7 LINE L1 6664 6905 -791 3 1334 643 239 94 6 chr15 98198628 98198788 -5296186 - MTD LTR MaLR -247 174 1 3 1334 709 314 22 19 chr15 98198795 98199064 -5295910 + Lx7 LINE L1 7039 7308 -388 3 1334 692 127 17 0 chr15 98199082 98199200 -5295774 + (TTCC)n Simple_repeat Simple_repeat 3 122 0 3 1334 376 20 20 0 chr15 98199204 98199244 -5295730 + (TTC)n Simple_repeat Simple_repeat 2 41 0 3 1334 1094 120 6 0 chr15 98199244 98199419 -5295555 + (TCC)n Simple_repeat Simple_repeat 3 178 0 3 1334 376 20 20 0 chr15 98199419 98199428 -5295546 + (TTC)n Simple_repeat Simple_repeat 1 10 0 3 1334 573 276 0 7 chr15 98199519 98199654 -5295320 + B1_Mur2 SINE Alu 1 134 -15 3 1334 180 0 0 0 chr15 98199656 98199676 -5295298 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 3 1334 2532 58 12 0 chr15 98199756 98200098 -5294876 - ORR1A1 LTR MaLR 0 346 1 3 1334 1510 288 81 47 chr15 98200102 98200591 -5294383 + L1M2 LINE L1 4445 4972 -1171 3 1334 213 121 0 0 chr15 98200591 98200624 -5294350 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1334 1510 291 81 48 chr15 98200624 98201008 -5293966 + L1M2 LINE L1 4942 5317 -563 3 1334 1502 82 0 5 chr15 98201008 98201204 -5293770 + B2_Mm2 SINE B2 1 195 0 3 1334 1391 308 79 52 chr15 98201204 98201343 -5293631 + L1M2 LINE L1 5318 5454 -426 3 1334 583 303 0 13 chr15 98201353 98201510 -5293464 + B3A SINE B2 28 182 -16 3 1334 852 198 0 0 chr15 98201510 98201768 -5293206 + (CA)n Simple_repeat Simple_repeat 1 258 0 3 1334 717 292 58 25 chr15 98201768 98202201 -5292773 + Lx4B LINE L1 5421 5861 -1197 3 1334 1080 62 7 40 chr15 98202266 98202416 -5292558 + B1_Mus1 SINE Alu 2 146 -2 3 1334 1191 112 0 0 chr15 98202416 98202595 -5292379 + (GA)n Simple_repeat Simple_repeat 2 180 0 3 1334 282 56 0 0 chr15 98202595 98202631 -5292343 + (GAAA)n Simple_repeat Simple_repeat 3 38 0 3 1334 227 194 32 16 chr15 98202632 98202695 -5292279 + L1M3 LINE L1 4282 4345 -1795 3 1334 219 69 0 0 chr15 98202822 98202851 -5292123 + (GGA)n Simple_repeat Simple_repeat 3 31 0 3 1334 657 126 0 0 chr15 98203026 98203137 -5291837 + (TCCC)n Simple_repeat Simple_repeat 4 114 0 3 1334 8243 45 4 0 chr15 98203144 98204189 -5290785 - L1Md_F2 LINE L1 0 6582 5532 3 1334 503 268 0 0 chr15 98204189 98204301 -5290673 - PB1D10 SINE Alu -5 112 1 3 1334 1203 259 21 27 chr15 98204301 98204338 -5290636 - L1MB5 LINE L1 -613 5561 5528 3 1334 354 277 78 26 chr15 98204610 98204725 -5290249 + RSINE1 SINE B4 16 136 -29 3 1334 248 268 153 14 chr15 98205122 98205266 -5289708 + L1M5 LINE L1 3899 4062 -2084 3 1334 385 111 0 40 chr15 98206166 98206241 -5288733 + C-rich Low_complexity Low_complexity 2 73 0 3 1334 215 351 30 30 chr15 98206971 98207106 -5287868 + MIRb SINE MIR 108 242 -26 3 1334 2293 52 41 3 chr15 98207152 98207443 -5287531 + L1_Mus2 LINE L1 6265 6566 0 3 1334 4411 54 11 26 chr15 98207451 98208024 -5286950 + L1Md_F2 LINE L1 6017 6580 -2 3 1334 27 0 0 0 chr15 98208024 98208051 -5286923 + AT_rich Low_complexity Low_complexity 1 27 0 3 1334 204 40 0 0 chr15 98208087 98208112 -5286862 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 3 1334 248 155 0 94 chr15 98208128 98208192 -5286782 + A-rich Low_complexity Low_complexity 1 58 0 3 1334 545 186 221 0 chr15 98209714 98209880 -5285094 + B3 SINE B2 10 215 -1 3 1334 350 316 0 7 chr15 98212113 98212222 -5282752 - PB1D9 SINE Alu -12 137 32 3 1334 243 247 21 86 chr15 98212608 98212701 -5282273 + MLT1E2 LTR MaLR 42 128 -499 3 1334 264 270 39 110 chr15 98213430 98213584 -5281390 + RLTR28B LTR ERVL 1 143 -338 3 1334 444 37 0 0 chr15 98213671 98213725 -5281249 + (CTG)n Simple_repeat Simple_repeat 1 54 0 3 1334 1033 220 205 10 chr15 98213916 98214219 -5280755 - ORR1D2 LTR MaLR -4 366 5 3 1334 14267 62 29 3 chr15 98214700 98216413 -5278561 + L1VL2 LINE L1 283 2048 -1567 3 1334 1236 42 12 6 chr15 98216413 98216581 -5278393 + (GAAA)n Simple_repeat Simple_repeat 2 170 0 3 1334 14267 64 40 6 chr15 98216581 98217493 -5277481 + L1VL2 LINE L1 2049 2988 -627 3 1334 22 56 0 0 chr15 98217985 98218021 -5276953 + AT_rich Low_complexity Low_complexity 1 36 0 3 1334 2161 112 57 23 chr15 98218133 98218517 -5276457 + RLTR17 LTR ERVK 1 397 -295 3 1334 318 26 0 0 chr15 98218517 98218556 -5276418 + (GA)n Simple_repeat Simple_repeat 2 40 0 3 1334 644 164 44 122 chr15 98218560 98218741 -5276233 - ORR1D2 LTR MaLR -203 167 1 3 1334 1417 201 72 21 chr15 98219386 98219773 -5275201 - RLTR11A2 LTR ERVK 0 527 121 3 1334 1275 164 282 8 chr15 98219925 98220312 -5274662 + Lx9 LINE L1 7145 7637 -7 3 1334 468 219 0 0 chr15 98220788 98220952 -5274022 + (TG)n Simple_repeat Simple_repeat 1 164 0 3 1334 201 154 0 0 chr15 98221038 98221077 -5273897 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1334 741 168 0 0 chr15 98221092 98221271 -5273703 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 1334 336 320 10 0 chr15 98222549 98222652 -5272322 - MER5A DNA MER1_type -58 131 28 3 1334 445 229 146 8 chr15 98223488 98223611 -5271363 + MT2A LTR ERVL 318 457 -76 3 1334 352 127 81 46 chr15 98223713 98223886 -5271088 + (TA)n Simple_repeat Simple_repeat 2 180 0 3 1334 240 59 39 0 chr15 98223891 98223942 -5271032 + MT2A LTR ERVL 481 533 0 3 1334 244 167 131 16 chr15 98223944 98224005 -5270969 + Lx8 LINE L1 7397 7464 -9 3 1334 418 240 99 68 chr15 98224004 98224165 -5270809 + Lx7 LINE L1 6143 6308 -1388 3 1334 354 284 26 44 chr15 98224171 98224314 -5270660 + Lx7 LINE L1 7090 7236 -237 3 1334 6065 110 50 20 chr15 98224314 98225244 -5269730 + RMER17B LTR ERVK 1 958 0 3 1334 272 320 82 39 chr15 98225244 98225331 -5269643 + Lx7 LINE L1 7235 7329 -367 3 1334 2391 297 74 14 chr15 98225380 98226243 -5268731 + L1_Mur3 LINE L1 1504 2428 -3452 3 1334 3467 38 0 0 chr15 98226243 98226639 -5268335 - MTA_Mm LTR MaLR 0 396 1 3 1334 2391 297 74 14 chr15 98226639 98226883 -5268091 + L1_Mur3 LINE L1 2429 2677 -3203 3 1334 316 287 59 10 chr15 98226870 98226972 -5268002 + Lx8 LINE L1 7164 7270 -203 3 1334 355 299 39 16 chr15 98227033 98227162 -5267812 + MLT1C LTR MaLR 284 415 -52 3 1334 471 108 189 0 chr15 98227326 98227437 -5267537 - Lx5 LINE L1 -1 7049 6918 3 1334 301 267 163 11 chr15 98227499 98227677 -5267297 + L1MD2 LINE L1 5791 5995 -364 3 1334 493 195 356 6 chr15 98227721 98227766 -5267208 + B3 SINE B2 1 58 -158 3 1334 324 0 0 0 chr15 98227766 98227802 -5267172 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1334 493 195 356 6 chr15 98227802 98227916 -5267058 + B3 SINE B2 59 215 -1 3 1334 21 0 0 0 chr15 98227922 98227943 -5267031 + AT_rich Low_complexity Low_complexity 1 21 0 3 1334 423 0 0 0 chr15 98229282 98229329 -5265645 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1334 633 181 99 19 chr15 98229834 98230009 -5264965 + B3 SINE B2 3 186 -9 4 1334 455 0 18 0 chr15 98230244 98230299 -5264675 + (TTG)n Simple_repeat Simple_repeat 1 56 0 4 1334 327 25 0 0 chr15 98230600 98230640 -5264334 + (GA)n Simple_repeat Simple_repeat 2 41 0 4 1334 582 234 42 21 chr15 98230715 98230859 -5264115 + B3A SINE B2 2 148 -50 4 1334 534 79 0 0 chr15 98230859 98230935 -5264039 + (CA)n Simple_repeat Simple_repeat 1 76 0 4 1334 1152 68 0 0 chr15 98233371 98233518 -5261456 + B1_Mus1 SINE Alu 2 148 0 4 1334 335 313 100 41 chr15 98233563 98233883 -5261091 - L1_Rod LINE L1 -506 5341 5003 4 1334 282 296 9 2 chr15 98233944 98234053 -5260921 + L1MEg LINE L1 2145 2226 -4718 4 1334 858 163 13 20 chr15 98234149 98234299 -5260675 - B1_Mur3 SINE Alu 0 149 1 4 1334 1316 278 72 15 chr15 98234299 98234704 -5260270 + Lx8 LINE L1 6185 6612 -861 4 1334 8256 138 13 8 chr15 98234811 98236099 -5258875 + MurERV4-int LTR ERVK 3966 5260 0 4 1334 2291 114 55 49 chr15 98236110 98236561 -5258413 + RMER4A LTR ERVK 13 466 0 4 1334 236 230 66 26 chr15 98236563 98236639 -5258335 + RMER4A LTR ERVK 308 386 -80 4 1334 222 37 0 0 chr15 98236639 98236666 -5258308 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 4 1334 1080 158 30 0 chr15 98236682 98236884 -5258090 + ORR1D1 LTR MaLR 167 374 0 4 1334 346 152 68 0 chr15 98236954 98237013 -5257961 + ORR1D1 LTR MaLR 1 63 -311 4 1334 201 250 29 14 chr15 98237855 98237924 -5257050 + CT-rich Low_complexity Low_complexity 2 71 0 4 1334 1095 139 0 0 chr15 98237936 98238116 -5256858 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1334 1095 139 0 0 chr15 98238132 98238500 -5256474 + (TG)n Simple_repeat Simple_repeat 1 368 0 4 1334 432 190 122 14 chr15 98239310 98239449 -5255525 + B3 SINE B2 63 216 0 4 1334 403 168 18 2 chr15 98240262 98240346 -5254628 - MLT1A0 LTR MaLR -35 330 258 4 1334 534 243 25 16 chr15 98240411 98240558 -5254416 - MLT1A0 LTR MaLR -214 160 2 4 1334 288 0 0 0 chr15 98240682 98240714 -5254260 + (TC)n Simple_repeat Simple_repeat 2 33 0 4 1334 378 0 0 0 chr15 98240714 98240755 -5254219 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1334 587 291 38 0 chr15 98240755 98240913 -5254061 - B3A SINE B2 -32 166 3 4 1334 556 257 128 7 chr15 98241650 98241799 -5253175 + ID_B1 SINE B4 4 170 -54 4 1334 378 250 34 0 chr15 98241730 98241818 -5253156 + PB1D10 SINE Alu 21 111 -6 4 1334 885 259 55 34 chr15 98241831 98242067 -5252907 + B4 SINE B4 1 241 -51 4 1334 324 70 0 0 chr15 98242080 98242123 -5252851 + (CATA)n Simple_repeat Simple_repeat 3 45 0 4 1334 214 179 0 125 chr15 98243242 98243306 -5251668 - ID4 SINE ID -26 57 2 4 1334 528 231 21 14 chr15 98243316 98243461 -5251513 - B1F SINE Alu -2 147 2 4 1334 439 302 226 41 chr15 98244531 98245066 -5249908 - Lx8 LINE L1 -55 7418 6785 4 1334 218 192 0 19 chr15 98246537 98246590 -5248384 + GA-rich Low_complexity Low_complexity 3 54 0 4 1334 1188 67 45 14 chr15 98247151 98247440 -5247534 + (TAGA)n Simple_repeat Simple_repeat 1 297 0 4 1334 994 57 22 43 chr15 98247451 98247635 -5247339 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 4 1334 406 0 37 0 chr15 98247798 98247852 -5247122 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 1334 405 309 13 39 chr15 98247855 98247984 -5246990 - B3A SINE B2 -46 152 23 4 1334 4152 50 19 6 chr15 98247984 98248508 -5246466 - L1Md_F3 LINE L1 0 6584 6054 4 1334 405 309 13 39 chr15 98248508 98248533 -5246441 - B3A SINE B2 -176 22 2 4 1334 2358 288 59 50 chr15 98249157 98249907 -5245067 + Lx8 LINE L1 6510 7242 -231 4 1334 1039 117 66 16 chr15 98249907 98250090 -5244884 + B2_Mm2 SINE B2 1 192 -3 4 1334 2358 288 59 50 chr15 98250090 98250288 -5244686 + Lx8 LINE L1 7243 7467 -6 4 1334 3345 42 0 17 chr15 98251625 98252032 -5242942 + MTB LTR MaLR 1 400 0 4 1334 1870 185 47 8 chr15 98252065 98252430 -5242544 - RLTR14 LTR ERV1 -3 379 1 4 1334 372 312 98 78 chr15 98253563 98253775 -5241199 + L1MEg LINE L1 1386 1624 -4460 4 1334 393 58 0 0 chr15 98253775 98253827 -5241147 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1334 372 312 98 78 chr15 98253827 98253962 -5241012 + L1MEg LINE L1 1625 1739 -4345 4 1334 983 243 151 0 chr15 98254146 98254418 -5240556 + Lx9 LINE L1 7153 7465 -179 4 1334 264 216 40 0 chr15 98254443 98254517 -5240457 + RMER13A LTR ERVK 746 822 -38 4 1334 267 237 0 0 chr15 98254534 98254593 -5240381 + RMER13A LTR ERVK 802 860 0 4 1334 331 186 52 132 chr15 98254593 98254729 -5240245 + Lx9 LINE L1 7498 7622 -22 4 1334 462 169 0 0 chr15 98255673 98255762 -5239212 + CT-rich Low_complexity Low_complexity 1 89 0 4 1334 15692 175 87 27 chr15 98256516 98257454 -5237520 + L1_Mur3 LINE L1 1327 2468 -3412 4 1334 252 0 0 0 chr15 98257454 98257482 -5237492 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 1334 15692 175 87 27 chr15 98257482 98258373 -5236601 + L1_Mur3 LINE L1 2469 3349 -2531 4 1334 1939 133 35 10 chr15 98258373 98258685 -5236289 + Lx5 LINE L1 6730 7049 -1 4 1334 15692 175 87 27 chr15 98258685 98258823 -5236151 + L1_Mur3 LINE L1 3350 3480 -2400 4 1334 245 29 29 0 chr15 98258823 98258857 -5236117 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1334 15692 175 87 27 chr15 98258857 98260522 -5234452 + L1_Mur3 LINE L1 3481 5177 -703 4 1334 339 187 0 0 chr15 98260659 98260734 -5234240 + L1_Mur3 LINE L1 5135 5209 -671 4 1334 366 240 16 47 chr15 98260747 98260874 -5234100 - Lx7 LINE L1 -1688 6008 5886 4 1334 749 156 7 0 chr15 98260853 98260994 -5233980 + L1_Mur3 LINE L1 5219 5360 -520 4 1334 736 143 14 0 chr15 98261959 98262099 -5232875 + CT-rich Low_complexity Low_complexity 1 142 0 4 1334 259 146 0 0 chr15 98263098 98263139 -5231835 - 7SLRNA srpRNA srpRNA -122 192 152 4 1334 343 272 12 54 chr15 98263143 98263310 -5231664 + Lx7 LINE L1 7290 7449 -247 4 1334 330 167 0 0 chr15 98263310 98263394 -5231580 + (TG)n Simple_repeat Simple_repeat 2 85 0 4 1334 590 188 6 0 chr15 98263420 98263585 -5231389 + (TG)n Simple_repeat Simple_repeat 2 167 0 4 1334 369 0 0 0 chr15 98263637 98263678 -5231296 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1334 538 207 37 48 chr15 98263709 98263897 -5231077 + Lx7 LINE L1 7511 7696 0 4 1334 768 312 44 7 chr15 98263915 98264189 -5230785 + B4A SINE B4 5 288 -4 4 1334 189 147 0 0 chr15 98264193 98264227 -5230747 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1334 340 247 112 0 chr15 98264947 98265036 -5229938 + ID_B1 SINE B4 95 193 -31 4 1334 1029 123 6 11 chr15 98265058 98265239 -5229735 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 1334 753 187 11 6 chr15 98265241 98265344 -5229630 + polypurine Low_complexity Low_complexity 3 104 0 4 1334 2494 51 13 3 chr15 98265344 98265661 -5229313 + L1Md_F2 LINE L1 6263 6582 0 4 1334 753 187 11 6 chr15 98265661 98265734 -5229240 + polypurine Low_complexity Low_complexity 105 179 0 4 1334 902 131 11 17 chr15 98265716 98265895 -5229079 + GA-rich Low_complexity Low_complexity 3 180 0 4 1334 216 0 0 0 chr15 98265895 98265919 -5229055 + (GGAA)n Simple_repeat Simple_repeat 1 24 0 4 1334 1017 0 0 0 chr15 98265919 98266032 -5228942 + (GGGAA)n Simple_repeat Simple_repeat 3 115 0 4 1334 342 0 0 0 chr15 98266032 98266069 -5228905 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 4 1334 5615 64 27 22 chr15 98267060 98267840 -5227134 + L1_Mus3 LINE L1 5851 6634 -4 4 1334 363 181 0 0 chr15 98269142 98269214 -5225760 + GA-rich Low_complexity Low_complexity 4 75 0 4 1334 678 294 70 0 chr15 98269489 98269690 -5225284 + ID_B1 SINE B4 2 216 -8 4 1334 852 265 82 37 chr15 98269707 98269977 -5224997 + B4 SINE B4 11 292 0 4 1334 22 0 0 0 chr15 98270113 98270135 -5224839 + AT_rich Low_complexity Low_complexity 1 22 0 4 1334 301 304 43 0 chr15 98270214 98270306 -5224668 + PB1D10 SINE Alu 1 96 -21 4 1334 180 0 0 0 chr15 98270306 98270326 -5224648 + (TCCC)n Simple_repeat Simple_repeat 4 23 0 4 1334 340 228 120 0 chr15 98270406 98270498 -5224476 + PB1D10 SINE Alu 1 103 -14 4 1334 1331 82 16 21 chr15 98270827 98271015 -5223959 + B2_Mm2 SINE B2 1 187 -8 4 1334 383 294 15 97 chr15 98271097 98271293 -5223681 - B3A SINE B2 -13 185 6 4 1334 1234 41 0 0 chr15 98271330 98271476 -5223498 + B1_Mus1 SINE Alu 2 147 -1 4 1334 914 246 44 103 chr15 98271606 98271789 -5223185 + Lx9 LINE L1 7278 7473 -171 4 1334 643 29 49 0 chr15 98271789 98271891 -5223083 + (TG)n Simple_repeat Simple_repeat 2 108 0 4 1334 914 246 44 103 chr15 98271891 98271911 -5223063 + Lx9 LINE L1 7474 7481 -163 4 1334 1241 63 20 11 chr15 98271911 98272359 -5222615 + (TG)n Simple_repeat Simple_repeat 1 452 0 4 1334 914 246 44 103 chr15 98272359 98272388 -5222586 + Lx9 LINE L1 7482 7495 -149 4 1334 1116 89 0 16 chr15 98272388 98272571 -5222403 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1334 914 246 44 103 chr15 98272571 98272720 -5222254 + Lx9 LINE L1 7496 7642 -2 4 1334 2266 129 159 17 chr15 98272949 98273352 -5221622 + RMER6B LTR ERVK 2 461 0 4 1334 5695 142 57 9 chr15 98273352 98273678 -5221296 + MYSERV6-int LTR ERVK 2 367 -8592 4 1334 5397 141 46 32 chr15 98273678 98274647 -5220327 + RLTR13C1 LTR ERVK 1 983 0 4 1334 5695 142 57 9 chr15 98274647 98275265 -5219709 + MYSERV6-int LTR ERVK 368 991 -7968 4 1334 3254 127 20 62 chr15 98275272 98275869 -5219105 + MYSERV6-int LTR ERVK 5630 6201 -2758 4 1334 710 159 131 24 chr15 98275869 98276005 -5218969 - RMER6D LTR ERVK -199 521 364 4 1334 423 0 0 0 chr15 98276005 98276052 -5218922 + (TC)n Simple_repeat Simple_repeat 1 47 0 4 1334 710 159 131 24 chr15 98276052 98276083 -5218891 - RMER6D LTR ERVK -357 363 337 4 1334 1373 138 153 21 chr15 98276084 98276372 -5218602 - ORR1B1 LTR MaLR -68 326 1 4 1334 309 44 0 0 chr15 98276752 98276797 -5218177 - Lx2 LINE L1 0 6997 6953 4 1334 2227 107 0 0 chr15 98276797 98277116 -5217858 + ORR1A2 LTR MaLR 1 319 -8 4 1334 1113 230 95 0 chr15 98277327 98277610 -5217364 + ORR1D2 LTR MaLR 21 330 -40 4 1334 1233 104 40 0 chr15 98277611 98277784 -5217190 + B2_Mm2 SINE B2 2 181 -14 4 1334 429 80 346 8 chr15 98277784 98277887 -5217087 - B2_Mm2 SINE B2 -11 184 47 4 1334 1327 51 28 22 chr15 98277915 98278094 -5216880 - B2_Mm2 SINE B2 -14 181 2 4 1334 21 0 0 0 chr15 98278094 98278115 -5216859 + AT_rich Low_complexity Low_complexity 1 21 0 4 1334 378 114 0 6 chr15 98278115 98278175 -5216799 + ORR1D2 LTR MaLR 317 378 -6 4 1334 203 161 0 0 chr15 98278311 98278342 -5216632 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1334 341 274 92 31 chr15 98278496 98278594 -5216380 + PB1D10 SINE Alu 13 116 -1 4 1334 237 132 0 0 chr15 98278701 98278739 -5216235 + (A)n Simple_repeat Simple_repeat 1 38 0 4 1334 2220 169 60 5 chr15 98280045 98280444 -5214530 - MTC LTR MaLR 0 421 1 4 1334 313 302 32 0 chr15 98280660 98280754 -5214220 + ID2 SINE ID 1 97 -55 4 1334 2905 58 5 10 chr15 98281359 98281743 -5213231 + L1_Mus2 LINE L1 6184 6565 -1 4 1334 856 207 133 0 chr15 98282066 98282254 -5212720 + B3 SINE B2 1 213 -3 4 1334 427 269 107 27 chr15 98282375 98282451 -5212523 + ID_B1 SINE B4 7 94 -130 4 1334 329 215 181 11 chr15 98282451 98282545 -5212429 + PB1D10 SINE Alu 1 110 -7 4 1334 453 133 0 0 chr15 98285945 98286020 -5208954 + (T)n Simple_repeat Simple_repeat 1 75 0 5 1334 396 271 16 78 chr15 98286020 98286148 -5208826 - PB1D7 SINE Alu 0 120 1 5 1334 494 120 47 16 chr15 98286272 98286399 -5208575 + (CAGA)n Simple_repeat Simple_repeat 2 132 0 5 1334 21 36 0 0 chr15 98287912 98287940 -5207034 + AT_rich Low_complexity Low_complexity 1 28 0 5 1334 22 70 0 0 chr15 98288033 98288076 -5206898 + AT_rich Low_complexity Low_complexity 1 43 0 5 1334 1538 123 20 20 chr15 98288163 98288412 -5206562 + MTC LTR MaLR 173 421 0 5 1334 6338 152 91 14 chr15 98288412 98289577 -5205397 + MTC-int LTR MaLR 1 1255 -3 5 1334 2216 145 108 3 chr15 98289580 98289961 -5205013 + MTC LTR MaLR 1 421 0 5 1334 521 284 81 17 chr15 98290296 98290468 -5204506 - Lx9 LINE L1 -613 7031 6849 5 1334 914 282 39 61 chr15 98290480 98290878 -5204096 - Lx9 LINE L1 -1051 6593 6205 5 1334 387 0 0 0 chr15 98290878 98290921 -5204053 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1334 914 282 39 61 chr15 98290921 98290933 -5204041 - Lx9 LINE L1 -1440 6204 6192 5 1334 729 313 37 65 chr15 98290953 98291336 -5203638 + L1M2 LINE L1 4649 5020 -1123 5 1334 460 304 121 82 chr15 98291341 98291621 -5203353 + B4 SINE B4 2 292 0 5 1334 231 242 115 75 chr15 98291648 98291822 -5203152 - RLTR21 LTR ERVK -317 1255 1075 5 1334 1123 55 7 52 chr15 98291842 98291996 -5202978 + B1_Mus1 SINE Alu 2 148 0 5 1334 747 247 131 12 chr15 98292023 98292351 -5202623 + L1_Mur3 LINE L1 5051 5417 -463 5 1334 1035 140 11 39 chr15 98292349 98292528 -5202446 - Lx8 LINE L1 -941 6532 6359 5 1334 315 281 103 10 chr15 98292568 98292665 -5202309 - MER21B LTR ERV1 -660 203 98 5 1334 1812 276 56 10 chr15 98292720 98293218 -5201756 + Lx8 LINE L1 6634 7154 -319 5 1334 480 39 25 25 chr15 98293529 98293609 -5201365 + (GTTTG)n Simple_repeat Simple_repeat 2 81 0 5 1334 198 0 0 0 chr15 98293711 98293733 -5201241 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 5 1334 209 57 29 0 chr15 98293749 98293784 -5201190 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 5 1334 666 0 0 0 chr15 98293798 98293872 -5201102 + (CTTG)n Simple_repeat Simple_repeat 2 75 0 5 1334 693 178 44 0 chr15 98293882 98294017 -5200957 - B1_Mur2 SINE Alu -7 142 2 5 1334 198 0 0 0 chr15 98294240 98294262 -5200712 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 1334 3721 47 9 9 chr15 98294273 98294727 -5200247 - L1_Mur1 LINE L1 0 5886 5433 5 1334 5202 125 80 20 chr15 98294729 98295627 -5199347 - MTC-int LTR MaLR -192 1066 115 5 1334 536 127 13 0 chr15 98295617 98295696 -5199278 - B2_Mm2 SINE B2 -113 82 3 5 1334 1208 77 13 0 chr15 98296369 98296525 -5198449 + B2_Mm2 SINE B2 3 160 -35 5 1334 1118 100 0 5 chr15 98296525 98296747 -5198227 + (GAAA)n Simple_repeat Simple_repeat 1 221 0 5 1334 888 279 14 0 chr15 98296968 98297176 -5197798 - B3 SINE B2 -4 212 2 5 1334 426 73 0 0 chr15 98297205 98297260 -5197714 - ORR1A3 LTR MaLR 0 326 272 5 1334 225 0 0 0 chr15 98297260 98297285 -5197689 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1334 21 36 0 0 chr15 98297325 98297353 -5197621 + AT_rich Low_complexity Low_complexity 1 28 0 5 1334 294 181 0 0 chr15 98297443 98297470 -5197504 + A-rich Low_complexity Low_complexity 1 27 0 5 1334 1224 42 0 0 chr15 98297470 98297612 -5197362 + B1_Mus2 SINE Alu 1 142 -5 5 1334 294 181 0 0 chr15 98297612 98297667 -5197307 + A-rich Low_complexity Low_complexity 28 82 0 5 1334 21 0 0 0 chr15 98298048 98298069 -5196905 + AT_rich Low_complexity Low_complexity 1 21 0 5 1334 328 219 71 71 chr15 98298077 98298190 -5196784 - Lx8 LINE L1 -3 7470 7358 5 1334 315 0 0 0 chr15 98298192 98298227 -5196747 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1334 2290 172 272 2 chr15 98298254 98298732 -5196242 - RMER19C LTR ERVK -2 609 3 5 1334 627 112 0 0 chr15 98298732 98298830 -5196144 + (CA)n Simple_repeat Simple_repeat 1 98 0 5 1334 874 174 14 7 chr15 98298832 98298977 -5195997 - B1_Mur2 SINE Alu -3 146 1 5 1334 237 167 152 22 chr15 98298994 98299086 -5195888 - Lx9 LINE L1 -9 7635 7532 5 1334 925 325 43 32 chr15 98299052 98299545 -5195429 + Lx9 LINE L1 6969 7466 -178 5 1334 189 0 0 0 chr15 98299701 98299722 -5195252 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1334 353 245 7 0 chr15 98299875 98300014 -5194960 + (TG)n Simple_repeat Simple_repeat 2 141 0 5 1334 246 204 0 0 chr15 98301095 98301139 -5193835 - MIR3 SINE MIR -11 197 154 5 1334 418 286 189 8 chr15 98301173 98301300 -5193674 - RSINE1 SINE B4 -13 152 3 5 1334 1264 51 6 6 chr15 98302820 98302998 -5191976 + (GGGAGA)n Simple_repeat Simple_repeat 1 178 0 5 1334 270 276 175 48 chr15 98303005 98303108 -5191866 + PB1D10 SINE Alu 1 116 -1 5 166 749 185 6 0 chr15 98303859 98304032 -5190942 + (TG)n Simple_repeat Simple_repeat 1 174 0 5 1335 639 199 14 25 chr15 98304042 98304480 -5190494 + (TATG)n Simple_repeat Simple_repeat 1 433 0 5 1335 560 303 22 38 chr15 98304480 98304665 -5190309 - B3A SINE B2 -16 182 1 5 1335 1028 215 5 0 chr15 98304968 98305168 -5189806 + B3 SINE B2 1 201 -15 5 1335 204 188 0 0 chr15 98305168 98305200 -5189774 + (CGA)n Simple_repeat Simple_repeat 2 33 0 5 1335 324 0 0 0 chr15 98306256 98306292 -5188682 + (CCA)n Simple_repeat Simple_repeat 2 37 0 5 1335 243 0 0 0 chr15 98307523 98307550 -5187424 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1335 1198 50 0 0 chr15 98307555 98307694 -5187280 - B1_Mus2 SINE Alu -8 139 1 5 1335 450 0 0 0 chr15 98308592 98308642 -5186332 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1335 1274 268 42 15 chr15 98308740 98309077 -5185897 + MTEa LTR MaLR 10 355 -24 5 1335 1131 52 0 0 chr15 98309396 98309532 -5185442 + B1_Mus1 SINE Alu 2 137 -11 5 1335 834 64 0 0 chr15 98309532 98309641 -5185333 + (GAAA)n Simple_repeat Simple_repeat 3 111 0 5 1335 301 272 68 2 chr15 98309848 98309943 -5185031 + B1F1 SINE Alu 16 117 0 5 1335 788 302 17 24 chr15 98310003 98310291 -5184683 - B4 SINE B4 -6 286 1 5 1335 543 210 287 0 chr15 98310366 98310533 -5184441 + B3 SINE B2 2 216 0 5 1335 180 0 0 0 chr15 98311098 98311118 -5183856 + (G)n Simple_repeat Simple_repeat 1 20 0 5 1335 409 283 8 32 chr15 98311488 98311612 -5183362 + ID_B1 SINE B4 78 198 -26 5 1335 770 157 0 0 chr15 98311501 98311622 -5183352 + B1_Mur4 SINE Alu 11 131 -19 5 1335 180 135 0 0 chr15 98311622 98311659 -5183315 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1335 23 0 0 0 chr15 98312729 98312752 -5182222 + GC_rich Low_complexity Low_complexity 1 23 0 5 1335 1269 34 0 0 chr15 98313779 98313926 -5181048 + B1_Mus1 SINE Alu 2 148 0 5 1335 204 40 0 0 chr15 98313940 98313965 -5181009 + (GA)n Simple_repeat Simple_repeat 2 26 0 5 1335 1375 72 38 16 chr15 98315512 98315695 -5179279 + B2_Mm2 SINE B2 1 187 -8 5 1335 450 0 0 0 chr15 98315821 98315871 -5179103 + (TTTTG)n Simple_repeat Simple_repeat 1 50 0 5 1335 630 180 74 0 chr15 98315872 98315994 -5178980 - B1F2 SINE Alu -13 136 6 5 1335 292 270 11 63 chr15 98315917 98316012 -5178962 - MT2B LTR ERVL -360 241 152 5 1335 3209 58 22 10 chr15 98316016 98316418 -5178556 - MTB_Mm LTR MaLR 0 407 1 5 1335 1175 148 63 19 chr15 98316531 98316738 -5178236 - B3 SINE B2 0 216 1 5 1335 255 93 0 0 chr15 98316740 98316783 -5178191 + (TTA)n Simple_repeat Simple_repeat 3 45 0 5 1335 3935 22 32 4 chr15 98317436 98317898 -5177076 - IAPLTR2_Mm LTR ERVK 0 475 1 5 1335 748 203 101 32 chr15 98317950 98318138 -5176836 + B3 SINE B2 2 202 -14 5 1335 259 344 36 31 chr15 98318287 98318363 -5176611 - L1M3c LINE L1 -5007 1134 1057 5 1335 1526 226 60 51 chr15 98318363 98318469 -5176505 + MTD LTR MaLR 1 94 -325 5 1335 1477 44 60 0 chr15 98318469 98318651 -5176323 + B2_Mm1a SINE B2 1 193 0 5 1335 1526 226 60 51 chr15 98318651 98318959 -5176015 + MTD LTR MaLR 95 419 0 5 1335 259 344 36 31 chr15 98318959 98319107 -5175867 - L1M3c LINE L1 -5085 1056 911 5 1335 1844 110 75 160 chr15 98319298 98319699 -5175275 + ORR1B2 LTR MaLR 1 367 0 5 1335 247 184 0 0 chr15 98319864 98319902 -5175072 - L1M3c LINE L1 -5612 519 482 5 1335 241 141 0 27 chr15 98320153 98320226 -5174748 + T-rich Low_complexity Low_complexity 2 72 0 5 1335 234 0 0 0 chr15 98320226 98320252 -5174722 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 5 1335 1241 42 0 0 chr15 98320252 98320396 -5174578 - B1_Mus2 SINE Alu -3 144 1 5 1335 512 268 31 23 chr15 98320637 98320754 -5174220 + B1_Mur1 SINE Alu 19 138 -11 5 1335 222 37 0 0 chr15 98320754 98320781 -5174193 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 5 1335 512 268 31 23 chr15 98320781 98320793 -5174181 + B1_Mur1 SINE Alu 139 149 0 5 1335 1421 67 17 0 chr15 98320800 98320978 -5173996 + B2_Mm2 SINE B2 1 181 -14 5 1335 1236 54 0 0 chr15 98320984 98321131 -5173843 - B1_Mus2 SINE Alu 0 147 1 5 1335 206 118 0 0 chr15 98321141 98321175 -5173799 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1335 338 256 0 6 chr15 98322097 98322147 -5172827 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1335 459 78 0 0 chr15 98322147 98322211 -5172763 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 5 1335 338 256 0 6 chr15 98322211 98322317 -5172657 + (TG)n Simple_repeat Simple_repeat 2 106 0 5 1335 231 204 0 0 chr15 98322328 98322382 -5172592 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 5 1335 240 213 0 0 chr15 98322391 98322438 -5172536 + (TATG)n Simple_repeat Simple_repeat 4 50 0 5 1335 744 248 6 58 chr15 98322438 98322609 -5172365 - RSINE1 SINE B4 0 165 4 5 1335 738 0 0 0 chr15 98323497 98323579 -5171395 + (TCTCCC)n Simple_repeat Simple_repeat 4 85 0 5 1335 498 70 0 0 chr15 98323579 98323649 -5171325 + (TG)n Simple_repeat Simple_repeat 2 72 0 5 1335 224 132 0 50 chr15 98323668 98323708 -5171266 + B3A SINE B2 88 125 -73 5 1335 527 223 33 0 chr15 98323731 98323852 -5171122 - B3A SINE B2 -73 125 1 6 1335 184 403 56 30 chr15 98323975 98324172 -5170802 - L3 LINE CR1 -800 3689 3488 6 1335 823 141 0 0 chr15 98324275 98324396 -5170578 - B1_Mus2 SINE Alu -10 137 17 6 1335 423 250 42 77 chr15 98324310 98324397 -5170577 - MT2B LTR ERVL -344 257 180 6 1335 306 0 0 0 chr15 98324397 98324431 -5170543 + (CCA)n Simple_repeat Simple_repeat 2 35 0 6 1335 423 250 42 77 chr15 98324431 98324486 -5170488 - MT2B LTR ERVL -422 179 120 6 1335 596 209 9 0 chr15 98324513 98324628 -5170346 + B1_Mur1 SINE Alu 34 149 0 6 1335 534 248 20 105 chr15 98324654 98324807 -5170167 + B1F SINE Alu 7 146 -3 6 1335 589 277 25 69 chr15 98324827 98324912 -5170062 + B3 SINE B2 20 96 -120 6 1335 1258 119 0 11 chr15 98324912 98325099 -5169875 + B2_Mm2 SINE B2 3 187 -8 6 1335 589 277 25 69 chr15 98325099 98325215 -5169759 + B3 SINE B2 97 212 -4 6 1335 1063 171 85 33 chr15 98325304 98325516 -5169458 - URR1B DNA MER1_type 0 225 3 6 1335 1630 37 5 0 chr15 98325826 98326017 -5168957 - B2_Mm1a SINE B2 0 193 2 6 1335 530 304 0 7 chr15 98326224 98326363 -5168611 + B1F SINE Alu 3 140 -9 6 1335 764 50 50 0 chr15 98326836 98326956 -5168018 + (TTTC)n Simple_repeat Simple_repeat 1 126 0 6 1335 991 35 39 30 chr15 98326959 98327631 -5167343 + (TG)n Simple_repeat Simple_repeat 1 678 0 6 1335 417 198 0 0 chr15 98329200 98329286 -5165688 + (TG)n Simple_repeat Simple_repeat 1 86 0 6 1335 431 264 26 60 chr15 98329286 98329403 -5165571 - B3 SINE B2 -30 186 74 6 1335 933 139 0 27 chr15 98329484 98329632 -5165342 + B1_Mur4 SINE Alu 6 149 -1 6 1335 260 317 38 97 chr15 98329800 98329903 -5165071 - B4 SINE B4 -118 174 1 6 1335 529 183 0 0 chr15 98329903 98329985 -5164989 - B3 SINE B2 -134 82 1 6 1335 1085 72 14 0 chr15 98330534 98330673 -5164301 + B1_Mur4 SINE Alu 3 143 -7 6 1335 228 283 0 0 chr15 98332314 98332360 -5162614 + ID4 SINE ID 3 48 -35 6 1335 324 0 0 0 chr15 98332368 98332404 -5162570 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1335 839 176 14 7 chr15 98332453 98332596 -5162378 + B1_Mur2 SINE Alu 1 144 -5 6 1335 2014 102 7 0 chr15 98332629 98332912 -5162062 + ORR1A2 LTR MaLR 1 285 -42 6 1335 1174 77 13 0 chr15 98332912 98333068 -5161906 + B2_Mm2 SINE B2 1 158 -37 6 1335 423 0 0 0 chr15 98333069 98333116 -5161858 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 6 1335 396 59 0 0 chr15 98333137 98333188 -5161786 + ORR1A2 LTR MaLR 296 346 0 6 1335 206 351 0 22 chr15 98333713 98333847 -5161127 + GA-rich Low_complexity Low_complexity 2 132 0 6 1335 431 229 209 0 chr15 98333950 98334055 -5160919 + RSINE1 SINE B4 2 128 -37 6 1335 782 87 40 17 chr15 98334056 98334232 -5160742 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 1335 964 172 27 22 chr15 98334246 98334430 -5160544 - B2_Mm2 SINE B2 -8 187 3 6 1335 282 123 0 81 chr15 98334478 98334540 -5160434 - B1_Mm SINE Alu -1 146 90 6 1335 534 248 17 0 chr15 98335009 98335126 -5159848 + B3A SINE B2 32 150 -48 6 1335 339 307 128 28 chr15 98335183 98335401 -5159573 + Lx8 LINE L1 7173 7412 -61 6 1335 522 219 8 15 chr15 98335404 98335534 -5159440 - RCHARR1 DNA MER1_type -125 849 721 6 1335 520 252 41 0 chr15 98335579 98335702 -5159272 + B4A SINE B4 158 285 -7 6 1335 201 291 0 0 chr15 98335737 98335823 -5159151 + (CA)n Simple_repeat Simple_repeat 1 86 0 6 1335 397 409 0 0 chr15 98335843 98336019 -5158955 + (CA)n Simple_repeat Simple_repeat 2 177 0 6 1335 374 60 40 0 chr15 98336061 98336111 -5158863 + ORR1C1 LTR MaLR 327 378 0 6 1335 438 242 64 64 chr15 98336200 98336341 -5158633 + RSINE1 SINE B4 3 143 -22 6 1335 590 259 38 12 chr15 98336322 98336482 -5158492 - B3 SINE B2 -52 164 1 6 1335 402 286 148 60 chr15 98336501 98336683 -5158291 - RCHARR1 DNA MER1_type -774 200 3 6 1335 240 35 0 0 chr15 98336794 98336823 -5158151 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1335 873 156 89 12 chr15 98337165 98337334 -5157640 + B2_Mm2 SINE B2 3 184 -11 6 1335 21 0 0 0 chr15 98337334 98337355 -5157619 + AT_rich Low_complexity Low_complexity 1 21 0 6 1335 1268 34 0 0 chr15 98337429 98337576 -5157398 + B1_Mm SINE Alu 1 147 0 6 1335 291 259 71 0 chr15 98337634 98337719 -5157255 - MIR SINE MIR -24 238 148 6 1335 446 111 11 53 chr15 98337839 98337934 -5157040 + RLTR15 LTR ERVK 34 124 -235 6 1335 1744 183 156 40 chr15 98338018 98338124 -5156850 + RMER1B Other Other 251 388 -678 6 1335 405 0 0 0 chr15 98338124 98338169 -5156805 + (TC)n Simple_repeat Simple_repeat 1 45 0 6 1335 312 27 0 0 chr15 98338169 98338205 -5156769 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 1335 1744 183 156 40 chr15 98338205 98338547 -5156427 + RMER1B Other Other 389 751 -315 6 1335 2461 88 120 14 chr15 98338549 98338917 -5156057 + MTB_Mm LTR MaLR 1 407 0 6 1335 5097 134 37 13 chr15 98338917 98339774 -5155200 + MTB_Mm-int LTR MaLR 3 880 -378 6 1335 306 0 0 0 chr15 98339793 98339827 -5155147 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 1335 803 113 32 8 chr15 98339828 98339953 -5155021 - B1_Mus2 SINE Alu -12 135 8 6 1335 230 246 0 116 chr15 98339927 98339996 -5154978 + RSINE1 SINE B4 23 83 -82 6 1335 811 225 0 12 chr15 98339966 98340128 -5154846 + B3 SINE B2 53 212 -4 6 1335 1078 67 0 0 chr15 98340325 98340459 -5154515 + B1_Mus1 SINE Alu 2 135 -13 6 1335 405 0 0 0 chr15 98340460 98340505 -5154469 + (GGA)n Simple_repeat Simple_repeat 1 45 0 6 1335 409 96 21 31 chr15 98340516 98340613 -5154361 + (TAGA)n Simple_repeat Simple_repeat 3 98 0 6 1335 928 0 18 0 chr15 98340876 98340988 -5153986 + (CA)n Simple_repeat Simple_repeat 1 114 0 6 1335 23 0 0 0 chr15 98341823 98341846 -5153128 + AT_rich Low_complexity Low_complexity 1 23 0 6 1335 721 127 54 31 chr15 98342199 98342329 -5152645 - B1_Mur3 SINE Alu 0 149 17 6 1335 947 152 37 37 chr15 98342390 98342581 -5152393 - B2_Mm2 SINE B2 -4 191 1 6 1335 520 335 74 62 chr15 98342701 98343086 -5151888 + MT2A LTR ERVL 1 397 -136 6 1335 278 0 54 0 chr15 98343086 98343123 -5151851 + (CCCA)n Simple_repeat Simple_repeat 1 39 0 6 1335 520 335 74 62 chr15 98343123 98343157 -5151817 + MT2A LTR ERVL 398 425 -108 6 1335 357 306 9 9 chr15 98343569 98343681 -5151293 + B1F1 SINE Alu 31 142 -7 6 1335 839 154 70 173 chr15 98343698 98343941 -5151033 - URR1A DNA MER1_type -8 218 1 6 1335 802 225 115 45 chr15 98344000 98344109 -5150865 - B3 SINE B2 -1 215 115 6 1335 4036 62 71 6 chr15 98344109 98344641 -5150333 - RMER2 LTR ERV1 0 567 1 6 1335 802 225 115 45 chr15 98344641 98344731 -5150243 - B3 SINE B2 -102 114 2 6 1335 3788 132 17 36 chr15 98345282 98345950 -5149024 - RMER6A LTR ERVK 0 756 57 6 1335 302 300 96 39 chr15 98346000 98346208 -5148766 + RLTR12B LTR ERVK 267 486 -42 6 1335 465 60 212 12 chr15 98346605 98346690 -5148284 + B2_Mm2 SINE B2 1 102 -93 6 1335 273 57 0 0 chr15 98346801 98346836 -5148138 + (TC)n Simple_repeat Simple_repeat 1 35 0 6 1335 632 27 0 0 chr15 98346964 98347038 -5147936 + B2_Mm2 SINE B2 67 140 -55 6 1335 426 162 14 0 chr15 98347037 98347111 -5147863 - B3 SINE B2 -141 75 1 6 1335 1265 41 0 0 chr15 98347128 98347275 -5147699 - B1_Mus2 SINE Alu 0 147 1 6 1335 530 209 45 0 chr15 98347312 98347422 -5147552 + B1_Mus2 SINE Alu 1 115 -32 6 1335 420 275 76 0 chr15 98347422 98347439 -5147535 + ID_B1 SINE B4 82 218 -6 6 1335 458 270 143 22 chr15 98348051 98348233 -5146741 - RMER15 LTR ERVL -64 511 308 6 1335 627 286 73 5 chr15 98348517 98348735 -5146239 + ORR1D2 LTR MaLR 1 233 -137 6 1335 428 294 119 0 chr15 98349021 98349164 -5145810 - RMER15-int LTR ERVL -3642 1357 1198 6 1335 555 206 147 22 chr15 98350407 98350605 -5144369 + MTD LTR MaLR 177 399 -22 6 1335 1136 62 7 0 chr15 98351196 98351341 -5143633 - B1_Mm SINE Alu 0 147 2 6 1335 451 273 141 0 chr15 98351356 98351484 -5143490 + RSINE1 SINE B4 20 165 0 6 1335 215 247 342 0 chr15 98351532 98351605 -5143369 + RSINE1 SINE B4 1 98 -67 6 1335 350 21 0 21 chr15 98351621 98351669 -5143305 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1335 180 0 0 0 chr15 98351669 98351688 -5143286 + (TC)n Simple_repeat Simple_repeat 2 21 0 6 1335 261 0 0 0 chr15 98351932 98351961 -5143013 + (TC)n Simple_repeat Simple_repeat 1 29 0 6 1335 549 191 30 8 chr15 98352023 98352155 -5142819 - B1F SINE Alu -14 135 1 6 1335 482 235 0 10 chr15 98352676 98352775 -5142199 + PB1D9 SINE Alu 23 120 0 6 1335 776 199 101 10 chr15 98352809 98353007 -5141967 + B3 SINE B2 1 216 0 6 1335 428 171 0 50 chr15 98353033 98353113 -5141861 + PB1D9 SINE Alu 1 76 -44 6 1335 376 271 113 31 chr15 98353694 98353888 -5141086 + L1M3de LINE L1 414 623 -6030 6 1335 698 254 76 20 chr15 98353902 98354052 -5140922 + B3 SINE B2 9 167 -49 6 1335 312 70 0 0 chr15 98354052 98354095 -5140879 + (CATA)n Simple_repeat Simple_repeat 4 46 0 6 1335 698 254 76 20 chr15 98354095 98354141 -5140833 + B3 SINE B2 168 216 0 6 1335 274 305 133 0 chr15 98354613 98354718 -5140256 + PB1D7 SINE Alu 2 120 0 6 1335 291 170 38 0 chr15 98356137 98356190 -5138784 - PB1 SINE Alu -49 78 24 6 1335 226 222 44 0 chr15 98356698 98356743 -5138231 - PB1D7 SINE Alu -13 107 61 6 1335 379 246 183 17 chr15 98357660 98357780 -5137194 + B1_Mur2 SINE Alu 1 140 -9 6 1335 218 310 127 0 chr15 98357789 98357860 -5137114 - ID4_ SINE ID -2 81 2 6 1335 579 140 42 42 chr15 98358363 98358482 -5136492 - PB1D9 SINE Alu -1 119 1 6 1335 579 176 246 12 chr15 98358493 98358660 -5136314 - B3 SINE B2 -9 207 2 6 1335 233 271 53 96 chr15 98358673 98358767 -5136207 - PB1D10 SINE Alu -27 90 1 6 1335 181 264 18 36 chr15 98358930 98358985 -5135989 - MIRc SINE MIR -192 76 23 6 1335 198 0 0 0 chr15 98359026 98359048 -5135926 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 6 1335 1010 72 7 7 chr15 98359049 98359188 -5135786 - B1_Mus1 SINE Alu 0 148 10 7 1335 493 208 107 94 chr15 98359051 98359210 -5135764 - B4 SINE B4 -69 223 63 7 1335 234 0 0 0 chr15 98359473 98359499 -5135475 + (A)n Simple_repeat Simple_repeat 1 26 0 7 1335 268 234 88 75 chr15 98359503 98359601 -5135373 - PB1D7 SINE Alu -4 116 10 7 1335 493 316 53 13 chr15 98359927 98360078 -5134896 + ID_B1 SINE B4 68 224 0 7 1335 22 56 0 0 chr15 98360188 98360224 -5134750 + AT_rich Low_complexity Low_complexity 1 36 0 7 1335 244 200 86 52 chr15 98360244 98360302 -5134672 + tRNA-Ala-GCY_ tRNA tRNA 8 67 -8 7 1335 231 226 66 61 chr15 98360302 98360335 -5134639 + ID4_ SINE ID 14 102 -50 7 1335 389 265 108 108 chr15 98360330 98360478 -5134496 - B3 SINE B2 -14 181 34 7 1335 1419 74 26 5 chr15 98360482 98360672 -5134302 + B2_Mm2 SINE B2 2 195 0 7 1335 234 271 21 0 chr15 98360728 98360776 -5134198 + PB1D9 SINE Alu 2 50 -70 7 1335 654 179 16 0 chr15 98360827 98360953 -5134021 + B1_Mus2 SINE Alu 12 141 -6 7 1335 232 190 32 168 chr15 98360952 98361047 -5133927 + RMER17A LTR ERVK 670 751 0 7 1335 397 230 27 0 chr15 98361143 98361217 -5133757 + B1_Mur1 SINE Alu 66 141 -8 7 1335 969 64 0 102 chr15 98362388 98362545 -5132429 + B1_Mus1 SINE Alu 5 145 -3 7 1335 268 281 27 20 chr15 98363024 98363113 -5131861 + PB1D10 SINE Alu 16 103 -17 7 1335 431 179 255 0 chr15 98363197 98363303 -5131671 - B1_Mus1 SINE Alu -10 138 6 7 1335 392 184 142 50 chr15 98363468 98363588 -5131386 + B3 SINE B2 82 212 -4 7 1335 222 200 0 0 chr15 98363720 98363765 -5131209 + RSINE1 SINE B4 93 137 -28 7 1335 21 0 0 0 chr15 98364308 98364329 -5130645 + GC_rich Low_complexity Low_complexity 1 21 0 7 1335 992 108 163 0 chr15 98365028 98365194 -5129780 + B2_Mm2 SINE B2 3 195 0 7 1335 484 96 27 0 chr15 98365601 98365674 -5129300 - PB1D9 SINE Alu -8 112 38 7 1335 841 157 21 0 chr15 98365704 98365738 -5129236 + B1_Mus1 SINE Alu 6 39 -109 7 1335 189 0 0 0 chr15 98365738 98365759 -5129215 + (G)n Simple_repeat Simple_repeat 1 21 0 7 1335 841 157 21 0 chr15 98365759 98365864 -5129110 + B1_Mus1 SINE Alu 40 147 -1 7 1335 224 274 26 40 chr15 98365895 98365971 -5129003 + PB1D10 SINE Alu 11 85 -32 7 1335 1150 35 0 59 chr15 98366016 98366169 -5128805 + B1_Mus2 SINE Alu 2 145 -2 7 1335 252 182 23 0 chr15 98366178 98366222 -5128752 + ORR1B2 LTR MaLR 312 356 -11 7 1335 1162 88 0 0 chr15 98366370 98366518 -5128456 - B1_Mus1 SINE Alu 0 148 1 7 1335 472 214 12 0 chr15 98366807 98366891 -5128083 - B1F SINE Alu -63 86 2 7 1335 423 300 307 10 chr15 98367035 98367647 -5127327 + L2 LINE L2 2061 2854 -565 7 1335 627 182 122 96 chr15 98367689 98367877 -5127097 - B3 SINE B2 -19 197 5 7 1335 395 270 128 7 chr15 98367877 98368026 -5126948 + B3 SINE B2 50 216 0 7 1335 529 250 24 0 chr15 98368183 98368307 -5126667 + B3 SINE B2 2 128 -88 7 1335 247 355 43 22 chr15 98368365 98368457 -5126517 - RSINE1 SINE B4 -6 159 66 7 1335 1306 97 43 0 chr15 98368469 98368654 -5126320 - B2_Mm2 SINE B2 0 195 3 7 1335 225 0 0 0 chr15 98369424 98369449 -5125525 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 7 1335 21 0 0 0 chr15 98369896 98369917 -5125057 + AT_rich Low_complexity Low_complexity 1 21 0 7 1335 228 241 0 0 chr15 98372030 98372088 -5122886 + (CATATA)n Simple_repeat Simple_repeat 5 62 0 7 1335 324 161 0 0 chr15 98372934 98372996 -5121978 + (CA)n Simple_repeat Simple_repeat 2 63 0 7 1335 218 208 0 0 chr15 98373594 98373642 -5121332 + T-rich Low_complexity Low_complexity 1 48 0 7 1335 180 77 0 0 chr15 98374247 98374273 -5120701 + (TGG)n Simple_repeat Simple_repeat 3 28 0 7 1335 382 249 58 39 chr15 98375139 98375256 -5119718 - B1_Mm SINE Alu 0 120 3 7 1335 1173 61 7 0 chr15 98375304 98375451 -5119523 - B1_Mus1 SINE Alu 0 148 1 7 1335 611 191 30 53 chr15 98375649 98375782 -5119192 + ID_B1 SINE B4 89 218 -6 7 1335 838 209 118 0 chr15 98375957 98376144 -5118830 + B3 SINE B2 2 210 -6 7 1335 452 200 94 0 chr15 98376171 98376256 -5118718 - PB1D9 SINE Alu -27 93 1 7 1335 702 93 93 0 chr15 98376288 98376395 -5118579 + B1_Mm SINE Alu 1 117 -30 7 1335 1053 91 0 7 chr15 98376397 98376541 -5118433 - B2_Mm2 SINE B2 -49 146 4 7 1335 1119 75 0 13 chr15 98376651 98376800 -5118174 + B1_Mus1 SINE Alu 2 148 0 7 1335 407 271 70 10 chr15 98377566 98377708 -5117266 - B3A SINE B2 -41 157 9 7 1335 195 114 0 0 chr15 98377797 98377832 -5117142 + (A)n Simple_repeat Simple_repeat 1 35 0 7 1335 722 185 19 82 chr15 98377842 98378001 -5116973 + B1_Mur2 SINE Alu 1 149 0 7 1335 264 91 0 0 chr15 98378312 98378356 -5116618 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 1335 255 31 0 0 chr15 98378388 98378420 -5116554 + (TCTG)n Simple_repeat Simple_repeat 4 35 0 7 1335 461 254 49 0 chr15 98378431 98378553 -5116421 - ID_B1 SINE B4 -29 195 68 7 1335 351 0 0 0 chr15 98378679 98378718 -5116256 + (TAGA)n Simple_repeat Simple_repeat 1 39 0 7 1335 213 343 162 0 chr15 98379178 98379283 -5115691 - L2b LINE L2 0 3375 3254 7 1335 207 162 0 0 chr15 98379381 98379418 -5115556 + T-rich Low_complexity Low_complexity 1 37 0 7 1335 1108 56 21 7 chr15 98379418 98379563 -5115411 - B1_Mus1 SINE Alu 0 148 2 7 1335 1633 47 0 0 chr15 98380338 98380528 -5114446 + B2_Mm1t SINE B2 1 190 -3 7 1335 318 321 12 0 chr15 98380565 98380649 -5114325 - BC1_Mm scRNA scRNA -67 85 1 7 1335 364 281 146 3 chr15 98380682 98380787 -5114187 - B1F1 SINE Alu -27 120 2 7 1335 295 293 0 58 chr15 98380830 98380917 -5114057 + ID4 SINE ID 2 83 0 7 1335 473 186 221 0 chr15 98380940 98381053 -5113921 + B1F2 SINE Alu 5 142 -7 7 1335 1234 21 7 14 chr15 98381116 98381263 -5113711 - B1_Mus2 SINE Alu 0 147 2 7 1335 682 267 23 45 chr15 98381282 98381502 -5113472 + B3 SINE B2 2 216 0 7 1335 497 217 22 0 chr15 98381680 98381772 -5113202 - RSINE1 SINE B4 -27 138 45 7 1335 655 257 198 19 chr15 98381925 98382183 -5112791 - MTE2b LTR MaLR -74 305 2 7 1335 1517 62 10 5 chr15 98382619 98382812 -5112162 + B2_Mm2 SINE B2 2 195 0 7 1335 645 251 148 11 chr15 98382869 98383034 -5111940 + B3 SINE B2 1 187 -29 7 1335 1075 102 7 0 chr15 98383034 98383181 -5111793 + B1_Mus1 SINE Alu 1 148 0 7 1335 645 251 148 11 chr15 98383181 98383204 -5111770 + B3 SINE B2 188 215 -1 7 1335 595 275 48 27 chr15 98383378 98383565 -5111409 - ID_B1 SINE B4 -13 211 21 7 1335 285 219 26 40 chr15 98383568 98383644 -5111330 - PB1D7 SINE Alu -23 97 23 7 1335 25 0 0 0 chr15 98383852 98383877 -5111097 + AT_rich Low_complexity Low_complexity 1 25 0 7 1335 1246 48 0 0 chr15 98383877 98384024 -5110950 - B1_Mus2 SINE Alu 0 147 1 7 1335 239 202 28 75 chr15 98384219 98384237 -5110737 + ORR1E-int LTR MaLR 632 644 -865 7 1335 605 160 173 16 chr15 98384237 98384364 -5110610 + B1_Mus1 SINE Alu 1 147 -1 7 1335 1070 145 0 0 chr15 98384416 98384575 -5110399 + B2_Mm2 SINE B2 2 160 -35 7 1335 187 0 28 83 chr15 98384577 98384613 -5110361 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 7 1335 1054 89 44 6 chr15 98384615 98384773 -5110201 + B2_Mm2 SINE B2 25 188 -7 7 1335 877 228 26 5 chr15 98385187 98385381 -5109593 + B3 SINE B2 8 205 -11 7 1335 228 175 25 0 chr15 98385731 98385771 -5109203 + B1_Mur4 SINE Alu 45 85 -65 7 1335 2275 135 94 7 chr15 98385770 98386174 -5108800 + RLTR11B LTR ERVK 13 451 -2 7 1335 23 33 0 0 chr15 98386741 98386771 -5108203 + AT_rich Low_complexity Low_complexity 1 30 0 7 1335 956 322 12 30 chr15 98387176 98387506 -5107468 + MurERV4-int LTR ERVK 4544 4867 -393 7 1335 226 250 0 0 chr15 98387512 98387556 -5107418 + ORR1E LTR MaLR 1 44 -315 7 1335 257 242 82 71 chr15 98387573 98387671 -5107303 + B4 SINE B4 3 101 -191 7 1335 284 239 5 33 chr15 98387936 98388016 -5106958 + MTEa LTR MaLR 287 365 -14 7 1335 1154 75 7 0 chr15 98388167 98388313 -5106661 + B1_Mus2 SINE Alu 1 147 0 7 1335 257 278 306 0 chr15 98388411 98388556 -5106418 + B3A SINE B2 2 190 -8 7 1335 597 222 39 16 chr15 98388632 98388760 -5106214 - B1_Mur2 SINE Alu 0 149 19 7 1335 216 111 0 0 chr15 98388842 98388878 -5106096 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 1335 28 0 0 0 chr15 98389004 98389032 -5105942 + AT_rich Low_complexity Low_complexity 1 28 0 7 1335 1291 59 0 0 chr15 98389278 98389448 -5105526 + B2_Mm1a SINE B2 1 170 -23 7 1335 1286 80 23 0 chr15 98389457 98389633 -5105341 + B2_Mm2 SINE B2 2 181 -14 7 1335 362 108 0 39 chr15 98389706 98389773 -5105201 + B2_Mm2 SINE B2 47 109 -107 7 1335 180 0 0 0 chr15 98389788 98389808 -5105166 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 7 1335 705 206 7 33 chr15 98389825 98389976 -5104998 + B1_Mus2 SINE Alu 1 147 0 7 1335 571 204 37 29 chr15 98389995 98390131 -5104843 + B1_Mur3 SINE Alu 1 137 -12 7 1335 198 171 0 0 chr15 98390138 98390179 -5104795 + GA-rich Low_complexity Low_complexity 4 44 0 7 1335 311 199 201 63 chr15 98390432 98390536 -5104438 + B1_Mur4 SINE Alu 40 150 0 7 1335 1424 65 11 0 chr15 98391047 98391233 -5103741 - B2_Mm1a SINE B2 -4 189 2 8 1335 365 322 50 61 chr15 98391298 98391496 -5103478 + B4A SINE B4 95 290 -2 8 1335 410 189 146 0 chr15 98391533 98391657 -5103317 + B1_Mur2 SINE Alu 2 149 0 8 1335 1240 76 12 0 chr15 98391701 98391873 -5103101 + B2_Mm1t SINE B2 1 174 -19 8 1335 416 345 102 15 chr15 98391881 98392087 -5102887 + ID_B1 SINE B4 1 224 0 8 1335 657 129 52 0 chr15 98392095 98392211 -5102763 + B1_Mus1 SINE Alu 10 131 -17 8 1335 225 119 0 0 chr15 98392749 98392791 -5102183 + (A)n Simple_repeat Simple_repeat 1 42 0 8 1335 1179 41 7 0 chr15 98393043 98393188 -5101786 - B1_Mus2 SINE Alu 0 147 2 8 1335 201 74 0 0 chr15 98393222 98393249 -5101725 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 8 1335 625 162 16 41 chr15 98393255 98393377 -5101597 - PB1D9 SINE Alu 0 120 2 8 1335 1164 61 0 0 chr15 98393436 98393584 -5101390 + B1_Mus1 SINE Alu 1 148 0 8 1335 300 292 179 21 chr15 98393883 98394023 -5100951 + RSINE1 SINE B4 4 165 0 8 1335 301 331 62 16 chr15 98394218 98394233 -5100741 + B4A SINE B4 73 93 -199 8 1335 526 233 37 4 chr15 98394233 98394357 -5100617 + PB1D9 SINE Alu 3 127 -20 8 1335 223 265 0 0 chr15 98394685 98394734 -5100240 + GA-rich Low_complexity Low_complexity 2 50 0 8 1335 216 0 0 0 chr15 98394872 98394896 -5100078 + (A)n Simple_repeat Simple_repeat 1 24 0 8 1335 460 273 26 32 chr15 98395074 98395229 -5099745 + B3A SINE B2 45 198 0 8 1335 614 244 37 0 chr15 98395901 98396036 -5098938 - RSINE1 SINE B4 -23 142 3 8 1335 689 223 124 11 chr15 98396051 98396237 -5098737 - B3 SINE B2 -9 207 1 8 1335 570 248 22 7 chr15 98396396 98396534 -5098440 - B1_Mur3 SINE Alu -9 140 1 8 1335 28 48 0 0 chr15 98397049 98397091 -5097883 + AT_rich Low_complexity Low_complexity 1 42 0 8 1335 1288 86 11 11 chr15 98398781 98398969 -5096005 - B2_Mm2 SINE B2 -7 188 1 8 1335 263 194 60 0 chr15 98399015 98399082 -5095892 - B1_Mus2 SINE Alu -73 74 4 8 1335 377 292 22 65 chr15 98399658 98399797 -5095177 + RSINE1 SINE B4 10 142 -23 8 1335 260 136 148 33 chr15 98399965 98400026 -5094948 + B1F1 SINE Alu 81 148 -1 8 1335 301 368 22 7 chr15 98400231 98400368 -5094606 - RSINE1 SINE B4 -18 147 9 8 1335 223 176 0 171 chr15 98400382 98400464 -5094510 - B1_Mm SINE Alu -8 139 72 8 1335 385 152 150 12 chr15 98400425 98400505 -5094469 + B1_Mus2 SINE Alu 49 139 -8 8 1335 262 270 135 0 chr15 98400544 98400633 -5094341 + Lx8 LINE L1 7062 7162 -311 8 1335 478 261 201 5 chr15 98400653 98400842 -5094132 + Lx8 LINE L1 7245 7470 -3 8 1335 703 136 88 0 chr15 98400916 98401041 -5093933 + B1_Mus1 SINE Alu 8 143 -5 8 1335 231 36 0 0 chr15 98401042 98401070 -5093904 + (GA)n Simple_repeat Simple_repeat 2 29 0 8 1335 774 197 0 21 chr15 98401128 98401273 -5093701 + B1_Mur3 SINE Alu 1 142 -7 8 1335 347 111 47 16 chr15 98401765 98401829 -5093145 + PB1D9 SINE Alu 31 96 -24 8 1335 879 73 24 0 chr15 98401800 98401923 -5093051 + B2_Mm2 SINE B2 56 181 -14 8 1335 27 0 0 0 chr15 98402535 98402562 -5092412 + AT_rich Low_complexity Low_complexity 1 27 0 8 1335 1104 119 54 0 chr15 98402634 98402819 -5092155 - B2_Mm2 SINE B2 0 195 1 8 1335 1981 132 133 11 chr15 98402872 98403240 -5091734 + MTC LTR MaLR 1 413 -8 8 1335 958 101 140 18 chr15 98403253 98403424 -5091550 + B2_Mm2 SINE B2 1 192 -3 8 1335 236 275 28 28 chr15 98403633 98403704 -5091270 + ID2 SINE ID 2 72 -11 8 1335 450 222 82 20 chr15 98403715 98403849 -5091125 + B4A SINE B4 90 232 -60 8 1335 906 197 75 5 chr15 98403849 98404048 -5090926 + B3 SINE B2 2 214 -2 8 1335 450 222 82 20 chr15 98404048 98404060 -5090914 + B4A SINE B4 233 244 -48 8 1335 1511 52 5 0 chr15 98404066 98404258 -5090716 + B2_Mm1t SINE B2 1 193 0 8 1335 1183 54 0 0 chr15 98404266 98404413 -5090561 + B1_Mm SINE Alu 1 147 0 8 1335 261 232 116 0 chr15 98404419 98404488 -5090486 + B4A SINE B4 216 292 0 8 1335 192 158 0 0 chr15 98404498 98404536 -5090438 + (CATA)n Simple_repeat Simple_repeat 3 40 0 8 1335 437 257 96 0 chr15 98404566 98404702 -5090272 + B1F SINE Alu 1 149 0 8 1335 517 297 61 28 chr15 98404743 98404923 -5090051 - B3 SINE B2 -6 210 25 8 1335 243 307 189 23 chr15 98405070 98405330 -5089644 - HAL1 LINE L1 -1048 1459 1157 8 1335 240 360 11 0 chr15 98405421 98405510 -5089464 + RSINE1 SINE B4 75 164 -1 8 1335 496 235 35 0 chr15 98405535 98405650 -5089324 - PB1D9 SINE Alu -1 119 1 8 1335 577 250 28 7 chr15 98405787 98405928 -5089046 - ID_B1 SINE B4 -3 221 78 8 1335 624 171 8 39 chr15 98405936 98406064 -5088910 - B1_Mur3 SINE Alu -21 128 5 8 1335 1073 93 116 0 chr15 98406092 98406264 -5088710 - B2_Mm1t SINE B2 -1 192 1 8 1335 530 266 110 7 chr15 98406312 98406467 -5088507 - B3A SINE B2 -27 171 1 8 1335 239 305 98 0 chr15 98406471 98406553 -5088421 - Tigger7 DNA MER2_type -2398 93 4 8 1335 340 137 0 14 chr15 98406709 98406783 -5088191 - B2_Mm2 SINE B2 -2 193 121 8 1335 825 167 7 0 chr15 98406991 98407129 -5087845 + B1_Mus1 SINE Alu 10 148 0 8 1335 988 99 0 0 chr15 98407197 98407339 -5087635 - B1_Mus2 SINE Alu -5 142 1 8 1335 425 240 94 23 chr15 98407431 98407559 -5087415 - B1_Mur4 SINE Alu 0 150 14 8 1335 25 0 0 0 chr15 98407648 98407673 -5087301 + AT_rich Low_complexity Low_complexity 1 25 0 8 1335 372 43 0 0 chr15 98407833 98407879 -5087095 + (TTTTC)n Simple_repeat Simple_repeat 5 50 0 8 1335 842 153 17 11 chr15 98407894 98408072 -5086902 + CT-rich Low_complexity Low_complexity 2 180 0 8 1335 744 187 7 0 chr15 98408077 98408216 -5086758 - B1_Mur2 SINE Alu -8 141 2 8 1335 549 318 44 15 chr15 98408344 98408615 -5086359 - L1MC4 LINE L1 -291 7751 7473 8 1335 510 267 104 68 chr15 98408662 98408794 -5086180 + Tigger7 DNA MER2_type 2140 2269 -222 8 1335 1465 33 17 0 chr15 98408794 98408975 -5085999 - B2_Mm2 SINE B2 -7 188 5 8 1335 510 267 104 68 chr15 98408975 98409091 -5085883 + Tigger7 DNA MER2_type 2270 2397 -94 8 1335 902 198 47 5 chr15 98409581 98409774 -5085200 + B3 SINE B2 6 206 -10 8 1335 312 132 19 0 chr15 98409977 98410030 -5084944 + B1F SINE Alu 1 54 -95 8 1335 1382 57 0 54 chr15 98410141 98410346 -5084628 - B2_Mm2 SINE B2 -1 194 1 8 1335 396 0 0 0 chr15 98410510 98410554 -5084420 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1335 1430 53 21 5 chr15 98411229 98411417 -5083557 - B2_Mm2 SINE B2 -1 194 4 8 1335 245 206 0 31 chr15 98412021 98412086 -5082888 + (TG)n Simple_repeat Simple_repeat 1 63 0 8 1335 555 280 39 113 chr15 98412086 98412368 -5082606 - B4A SINE B4 0 292 32 8 1335 1377 73 21 0 chr15 98414155 98414346 -5080628 + B2_Mm2 SINE B2 1 195 0 8 1335 363 136 0 0 chr15 98414350 98414409 -5080565 + (TAAA)n Simple_repeat Simple_repeat 3 61 0 8 1335 583 206 39 16 chr15 98414445 98414573 -5080401 + B1_Mur2 SINE Alu 18 148 -1 8 1335 189 107 0 0 chr15 98414573 98414601 -5080373 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 8 1335 579 117 68 6 chr15 98414842 98415005 -5079969 + CT-rich Low_complexity Low_complexity 2 174 0 8 1335 725 144 8 34 chr15 98415031 98415269 -5079705 + CT-rich Low_complexity Low_complexity 1 231 0 8 1335 540 229 0 94 chr15 98416286 98416445 -5078529 + B1_Mus1 SINE Alu 4 147 -1 8 1335 228 135 0 0 chr15 98416464 98416501 -5078473 + (GGGAA)n Simple_repeat Simple_repeat 2 38 0 8 1335 655 192 46 97 chr15 98416526 98416722 -5078252 + B3A SINE B2 8 193 -5 8 1335 1065 71 0 0 chr15 98416778 98416919 -5078055 + B1_Mus2 SINE Alu 5 145 -2 8 1335 579 96 0 0 chr15 98416921 98417004 -5077970 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 8 1335 817 53 61 0 chr15 98417024 98417138 -5077836 - B2_Mm2 SINE B2 -72 123 3 8 1335 558 270 0 0 chr15 98417138 98417377 -5077597 + (TA)n Simple_repeat Simple_repeat 1 239 0 8 1335 280 310 59 12 chr15 98417390 98417475 -5077499 - PB1D10 SINE Alu -8 109 21 8 1335 364 288 59 86 chr15 98417677 98417718 -5077256 + B4 SINE B4 43 78 -214 8 1335 677 162 41 34 chr15 98417718 98417865 -5077109 + B1_Mur2 SINE Alu 2 149 0 8 1335 268 211 0 17 chr15 98417899 98417957 -5077017 + B4A SINE B4 230 286 -6 8 1335 438 176 0 0 chr15 98417973 98418058 -5076916 + (CA)n Simple_repeat Simple_repeat 1 85 0 8 1335 299 196 0 0 chr15 98418058 98418109 -5076865 + B4 SINE B4 17 67 -225 8 1335 636 174 20 14 chr15 98418508 98418654 -5076320 + Lx4A LINE L1 6912 7058 0 8 1335 30 0 0 0 chr15 98418654 98418684 -5076290 + AT_rich Low_complexity Low_complexity 1 30 0 8 1335 494 202 60 60 chr15 98419230 98419346 -5075628 + B1_Mur4 SINE Alu 13 128 -22 8 1335 961 59 72 14 chr15 98419628 98419766 -5075208 - B1_Mus2 SINE Alu 0 147 2 8 1335 25 31 0 0 chr15 98420436 98420468 -5074506 + AT_rich Low_complexity Low_complexity 1 32 0 8 1335 234 81 0 0 chr15 98421698 98421735 -5073239 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 8 1335 375 23 0 0 chr15 98421942 98421986 -5072988 + (TCC)n Simple_repeat Simple_repeat 1 44 0 8 1335 576 42 0 0 chr15 98424309 98424380 -5070594 + (TG)n Simple_repeat Simple_repeat 1 71 0 8 1335 273 276 13 13 chr15 98425755 98425832 -5069142 + MIRc SINE MIR 68 144 -124 8 1335 294 292 12 15 chr15 98425940 98426064 -5068910 - MIRc SINE MIR -131 137 9 8 1335 474 173 0 0 chr15 98426103 98426184 -5068790 + B1_Mur4 SINE Alu 38 118 -32 8 1335 198 0 0 0 chr15 98426197 98426219 -5068755 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 9 1335 387 209 11 55 chr15 98429516 98429607 -5065367 + RSINE1 SINE B4 2 88 -77 9 1335 522 86 0 0 chr15 98429626 98429707 -5065267 + (CA)n Simple_repeat Simple_repeat 1 81 0 9 1335 1102 45 0 0 chr15 98429744 98429878 -5065096 + B1_Mm SINE Alu 1 134 -13 9 1335 377 37 37 0 chr15 98429878 98429932 -5065042 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 9 1335 333 0 0 0 chr15 98431547 98431584 -5063390 + (CA)n Simple_repeat Simple_repeat 1 37 0 9 1335 198 337 73 42 chr15 98431888 98431984 -5062990 + MIR3 SINE MIR 86 184 -24 9 1335 431 235 28 47 chr15 98432045 98432152 -5062822 - PB1D7 SINE Alu -7 113 9 9 1335 283 276 202 25 chr15 98432152 98432164 -5062810 - ID_B1 SINE B4 -7 217 78 9 1335 265 326 116 63 chr15 98432217 98432407 -5062567 - MIR SINE MIR -52 210 11 9 1336 673 140 0 0 chr15 98435316 98435423 -5059551 - B2_Mm2 SINE B2 -88 107 1 9 1336 456 302 0 16 chr15 98435535 98435656 -5059318 + B3 SINE B2 12 130 -86 9 1336 1117 48 0 26 chr15 98435715 98435866 -5059108 + B1_Mus2 SINE Alu 1 147 0 9 1336 246 365 96 48 chr15 98435971 98436022 -5058952 + L2b LINE L2 3021 3083 -304 9 1336 261 0 0 0 chr15 98436022 98436051 -5058923 + (CA)n Simple_repeat Simple_repeat 1 29 0 9 1336 362 366 43 60 chr15 98436051 98436333 -5058641 + L2b LINE L2 3082 3358 -17 9 1336 319 320 0 0 chr15 98436364 98436439 -5058535 + ID4_ SINE ID 7 81 -2 9 1336 334 274 175 39 chr15 98436541 98436826 -5058148 + L2a LINE L2 2965 3288 -138 9 1336 207 0 0 0 chr15 98437071 98437094 -5057880 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 1336 279 0 0 0 chr15 98438081 98438112 -5056862 + (CA)n Simple_repeat Simple_repeat 1 31 0 9 1336 30 0 0 0 chr15 98439510 98439540 -5055434 + GC_rich Low_complexity Low_complexity 1 30 0 9 1336 227 222 24 57 chr15 98439659 98439783 -5055191 + (CCCG)n Simple_repeat Simple_repeat 3 122 0 9 1336 618 103 259 0 chr15 98441070 98441186 -5053788 + B1_Mus2 SINE Alu 2 147 0 9 1336 182 156 111 0 chr15 98441235 98441280 -5053694 + MIRc SINE MIR 131 180 -88 9 1336 1101 76 0 7 chr15 98441725 98441871 -5053103 + B1_Mus2 SINE Alu 1 145 -2 9 1336 463 229 90 0 chr15 98441887 98442009 -5052965 + B3 SINE B2 27 159 -57 9 1336 865 249 35 0 chr15 98442060 98442261 -5052713 + B3 SINE B2 2 209 -7 9 1336 474 296 22 22 chr15 98442297 98442432 -5052542 + B1F2 SINE Alu 2 136 -13 9 1336 335 244 78 0 chr15 98442403 98442493 -5052481 + B1_Mur4 SINE Alu 50 146 -4 9 1336 600 265 13 26 chr15 98442504 98442659 -5052315 + RSINE1 SINE B4 11 163 -2 9 1336 756 221 12 0 chr15 98442661 98443088 -5051886 + (CA)n Simple_repeat Simple_repeat 1 432 0 9 1336 549 233 0 0 chr15 98443124 98443389 -5051585 + (CA)n Simple_repeat Simple_repeat 1 265 0 9 1336 183 170 0 0 chr15 98443441 98443488 -5051486 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 1336 343 304 106 9 chr15 98443510 98443623 -5051351 + PB1 SINE Alu 1 124 -3 9 1336 530 262 0 16 chr15 98443670 98443798 -5051176 + RSINE1 SINE B4 4 129 -36 9 1336 871 122 0 21 chr15 98443863 98444005 -5050969 - B1_Mus1 SINE Alu -4 144 6 9 1336 21 0 0 0 chr15 98444767 98444788 -5050186 + AT_rich Low_complexity Low_complexity 1 21 0 9 1336 282 272 152 0 chr15 98444817 98444942 -5050032 - RSINE1 SINE B4 -19 146 3 9 1336 260 346 143 0 chr15 98445447 98445580 -5049394 - Charlie22a DNA MER1_type -304 187 36 9 1336 1202 68 0 0 chr15 98446068 98446215 -5048759 + B1_Mus1 SINE Alu 1 147 -1 9 1336 209 57 29 0 chr15 98446217 98446252 -5048722 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 9 1336 446 117 311 0 chr15 98446253 98446356 -5048618 - B1_Mur4 SINE Alu -15 135 1 9 1336 350 283 81 27 chr15 98446493 98446616 -5048358 + B3A SINE B2 42 175 -23 9 1336 276 30 0 0 chr15 98446616 98446649 -5048325 + (CA)n Simple_repeat Simple_repeat 1 33 0 9 1336 350 283 81 27 chr15 98446649 98446674 -5048300 + B3A SINE B2 176 198 0 9 1336 910 323 83 19 chr15 98446776 98447259 -5047715 - L2b LINE L2 -218 3157 2656 9 1336 235 316 0 0 chr15 98447345 98447402 -5047572 - MIRm SINE MIR -5 271 215 9 1336 190 310 17 0 chr15 98448270 98448328 -5046646 + MIRc SINE MIR 92 150 -118 9 1336 1138 44 0 7 chr15 98448329 98448465 -5046509 + B1_Mus1 SINE Alu 1 135 -13 9 1336 207 0 0 0 chr15 98448465 98448488 -5046486 + (T)n Simple_repeat Simple_repeat 1 23 0 9 1336 642 269 76 6 chr15 98448618 98448790 -5046184 - B3A SINE B2 -14 184 1 9 1336 3226 79 2 0 chr15 98448913 98449319 -5045655 - MTB_Mm LTR MaLR 0 407 1 9 1336 313 216 23 0 chr15 98449614 98449702 -5045272 + GA-rich Low_complexity Low_complexity 4 93 0 9 1336 1353 192 218 3 chr15 98449752 98450060 -5044914 - ORR1D1 LTR MaLR 0 374 1 9 1336 1126 92 0 0 chr15 98450236 98450378 -5044596 + B1_Mus1 SINE Alu 1 142 -6 9 1336 669 66 0 0 chr15 98450381 98450472 -5044502 + (GA)n Simple_repeat Simple_repeat 1 91 0 9 1336 528 252 68 37 chr15 98451291 98451452 -5043522 - B3 SINE B2 0 216 51 9 1336 378 0 0 0 chr15 98451468 98451510 -5043464 + (TGGGGG)n Simple_repeat Simple_repeat 4 45 0 9 1336 792 21 0 0 chr15 98451626 98451720 -5043254 + (GGGGA)n Simple_repeat Simple_repeat 4 97 0 9 1336 970 116 42 154 chr15 98452085 98452235 -5042739 + B2_Mm2 SINE B2 2 149 -46 9 1336 942 102 50 14 chr15 98452235 98452374 -5042600 + B1_Mus1 SINE Alu 5 148 0 9 1336 970 116 42 154 chr15 98452374 98452407 -5042567 + B2_Mm2 SINE B2 150 161 -34 9 1336 315 0 0 0 chr15 98452407 98452442 -5042532 + (GA)n Simple_repeat Simple_repeat 2 36 0 9 1336 970 116 42 154 chr15 98452442 98452471 -5042503 + B2_Mm2 SINE B2 162 190 -5 9 1336 183 42 0 0 chr15 98452578 98452602 -5042372 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 9 1336 225 235 117 81 chr15 98452607 98452718 -5042256 - PB1D10 SINE Alu -1 116 2 9 1336 180 0 0 0 chr15 98453430 98453450 -5041524 + (TGGGGG)n Simple_repeat Simple_repeat 4 23 0 9 1336 565 234 92 99 chr15 98453483 98453635 -5041339 - B3A SINE B2 -44 151 1 9 1336 269 237 65 13 chr15 98453809 98453886 -5041088 - ID4_ SINE ID -2 81 1 9 1336 641 318 61 31 chr15 98454039 98454351 -5040623 + MLT1F2 LTR MaLR 29 342 -227 9 1336 3136 127 90 40 chr15 98454385 98454692 -5040282 + RMER4B LTR ERVK 1 329 -256 9 1336 363 44 0 0 chr15 98454692 98454737 -5040237 + (GGA)n Simple_repeat Simple_repeat 3 47 0 9 1336 3136 127 90 40 chr15 98454737 98454986 -5039988 + RMER4B LTR ERVK 330 584 -1 9 1336 23 0 0 0 chr15 98455056 98455079 -5039895 + AT_rich Low_complexity Low_complexity 1 23 0 9 1336 1183 62 0 0 chr15 98455163 98455309 -5039665 + B1_Mus2 SINE Alu 2 147 0 9 1336 429 313 88 46 chr15 98455360 98455602 -5039372 + L1ME3 LINE L1 5621 5877 -285 9 1336 592 234 83 55 chr15 98455602 98455783 -5039191 + B3A SINE B2 3 188 -10 9 1336 429 313 88 46 chr15 98455783 98455868 -5039106 + L1ME3 LINE L1 5878 5961 -201 9 1336 478 16 31 0 chr15 98455892 98455956 -5039018 + B1_Mus2 SINE Alu 82 147 0 9 1336 252 263 18 0 chr15 98455972 98456029 -5038945 - B3 SINE B2 -128 88 31 9 1336 240 59 0 0 chr15 98456029 98456063 -5038911 + (TCTG)n Simple_repeat Simple_repeat 3 36 0 9 1336 410 333 7 26 chr15 98456420 98456432 -5038542 - B1F1 SINE Alu -1 148 137 9 1336 369 0 0 0 chr15 98456432 98456473 -5038501 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1336 410 333 7 26 chr15 98456473 98456611 -5038363 - B1F1 SINE Alu -13 136 2 9 1336 209 204 20 0 chr15 98456807 98456856 -5038118 + G-rich Low_complexity Low_complexity 4 53 0 9 1336 315 336 0 17 chr15 98457217 98457332 -5037642 - PB1D10 SINE Alu 0 117 5 9 1336 776 210 72 0 chr15 98457370 98457537 -5037437 - B3 SINE B2 -10 206 28 9 1336 366 85 0 0 chr15 98457540 98457599 -5037375 + (TG)n Simple_repeat Simple_repeat 2 60 0 9 1336 834 157 200 32 chr15 98457610 98457795 -5037179 - B3 SINE B2 0 216 1 9 1336 828 269 4 35 chr15 98457801 98458032 -5036942 - ID_B1 SINE B4 0 224 1 9 1336 998 205 63 5 chr15 98458063 98458254 -5036720 - B3 SINE B2 -7 209 8 9 1336 650 208 75 23 chr15 98458308 98458482 -5036492 - B3 SINE B2 0 193 1 9 1336 33 25 0 0 chr15 98460341 98460381 -5034593 + AT_rich Low_complexity Low_complexity 1 40 0 9 1336 260 250 23 35 chr15 98462688 98462775 -5032199 + GA-rich Low_complexity Low_complexity 1 86 0 9 1336 28 61 0 0 chr15 98465261 98465310 -5029664 + GC_rich Low_complexity Low_complexity 1 49 0 9 1336 21 57 0 0 chr15 98465534 98465569 -5029405 + GC_rich Low_complexity Low_complexity 1 35 0 9 1336 333 117 0 0 chr15 98468597 98468657 -5026317 + (T)n Simple_repeat Simple_repeat 1 60 0 9 1336 1254 48 0 0 chr15 98468658 98468805 -5026169 - B1_Mm SINE Alu 0 147 1 9 1336 324 0 0 0 chr15 98468885 98468921 -5026053 + (TC)n Simple_repeat Simple_repeat 2 37 0 9 1336 348 24 0 0 chr15 98468921 98468961 -5026013 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1336 369 129 0 0 chr15 98468969 98469031 -5025943 - B1_Mur4 SINE Alu -7 143 82 9 1336 306 0 0 0 chr15 98469050 98469084 -5025890 + (TG)n Simple_repeat Simple_repeat 2 35 0 9 1336 291 54 0 0 chr15 98469130 98469167 -5025807 + (TTCTCC)n Simple_repeat Simple_repeat 3 39 0 9 1336 1110 96 162 0 chr15 98469167 98469334 -5025640 - B2_Mm2 SINE B2 0 195 2 9 1336 273 352 11 0 chr15 98469444 98469532 -5025442 - PB1D10 SINE Alu -28 89 1 9 1336 450 0 0 0 chr15 98470971 98471021 -5023953 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 1336 1196 68 0 0 chr15 98473331 98473478 -5021496 - B1_Mus2 SINE Alu 0 147 1 9 1336 360 0 0 0 chr15 98475679 98475719 -5019255 + (A)n Simple_repeat Simple_repeat 1 40 0 9 1336 1205 82 0 0 chr15 98478275 98478422 -5016552 - B1_Mur3 SINE Alu -2 147 1 9 1336 398 184 163 0 chr15 98478462 98478560 -5016414 - B2_Mm2 SINE B2 -81 114 1 1 1336 408 261 96 7 chr15 98478576 98478711 -5016263 - B1F SINE Alu -1 148 2 1 1336 277 236 41 14 chr15 98482215 98482288 -5012686 - ID4 SINE ID 0 83 9 1 1336 188 186 66 33 chr15 98482329 98482390 -5012584 - L3 LINE CR1 -4400 89 27 1 1336 571 173 385 0 chr15 98483015 98483171 -5011803 + B3 SINE B2 1 216 0 1 1336 420 110 27 0 chr15 98483218 98483291 -5011683 + B1_Mus1 SINE Alu 7 81 -67 1 1336 758 201 27 34 chr15 98483642 98483791 -5011183 + B1_Mur3 SINE Alu 1 148 -1 1 1336 1365 228 110 27 chr15 98483791 98484201 -5010773 + Lx9 LINE L1 7200 7643 -1 1 1336 21 0 0 0 chr15 98484208 98484229 -5010745 + AT_rich Low_complexity Low_complexity 1 21 0 1 1336 295 257 140 19 chr15 98484254 98484361 -5010613 + PB1D7 SINE Alu 1 120 0 1 1336 1010 218 19 14 chr15 98484390 98484599 -5010375 + B3 SINE B2 7 216 0 1 1336 515 244 61 30 chr15 98484619 98484750 -5010224 + B1F SINE Alu 1 135 -14 1 1336 533 136 336 0 chr15 98485045 98485155 -5009819 - B1_Mus1 SINE Alu -1 147 1 1 1336 1282 53 129 0 chr15 98485285 98485456 -5009518 + B2_Mm1t SINE B2 1 193 0 1 1336 738 218 55 69 chr15 98485488 98485690 -5009284 + B3 SINE B2 5 203 -13 1 1336 196 30 61 0 chr15 98485711 98485744 -5009230 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1336 249 33 0 0 chr15 98485908 98485938 -5009036 + (CGTG)n Simple_repeat Simple_repeat 1 30 0 1 1336 602 229 94 19 chr15 98485944 98486104 -5008870 - B4A SINE B4 -14 278 107 1 1336 625 204 70 145 chr15 98487445 98487686 -5007288 + MT2A LTR ERVL 1 223 -310 1 1336 427 268 174 14 chr15 98487724 98487868 -5007106 - B4A SINE B4 -85 207 41 1 1336 833 226 0 78 chr15 98487912 98488104 -5006870 - B3 SINE B2 -32 184 8 1 1336 457 327 107 5 chr15 98488082 98488110 -5006864 - B4A SINE B4 -51 241 215 1 1336 195 42 0 0 chr15 98488110 98488134 -5006840 + (TTTTC)n Simple_repeat Simple_repeat 1 24 0 1 1336 457 327 107 5 chr15 98488134 98488302 -5006672 - B4A SINE B4 -78 214 26 1 1336 214 244 74 53 chr15 98488515 98488610 -5006364 + PB1D7 SINE Alu 21 117 -3 1 1336 523 140 42 34 chr15 98489142 98489260 -5005714 + Lx3A LINE L1 6863 6981 0 1 1336 529 349 79 20 chr15 98489317 98489534 -5005440 + B4A SINE B4 1 232 -60 1 1336 604 286 12 36 chr15 98489534 98489701 -5005273 + RSINE1 SINE B4 3 165 0 1 1336 529 349 79 20 chr15 98489701 98489737 -5005237 + B4A SINE B4 233 268 -24 1 1336 369 0 0 0 chr15 98489737 98489778 -5005196 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1336 194 0 39 0 chr15 98489835 98489861 -5005113 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 1 1336 1234 35 0 0 chr15 98489863 98490004 -5004970 - B1_Mus1 SINE Alu -6 142 2 1 1336 1455 74 16 0 chr15 98490275 98490464 -5004510 - B2_Mm1t SINE B2 -1 192 1 1 1336 1580 47 5 0 chr15 98490608 98490798 -5004176 + B2_Mm1t SINE B2 2 192 -1 1 1336 551 186 0 56 chr15 98490990 98491115 -5003859 - B1_Mur1 SINE Alu 0 149 32 1 1336 250 264 76 11 chr15 98491115 98491207 -5003767 - L2b LINE L2 -27 3348 3251 1 1336 796 68 3 0 chr15 98491436 98491561 -5003413 + B1_Mus1 SINE Alu 12 139 -10 1 1336 1002 206 10 10 chr15 98491599 98491800 -5003174 + B3 SINE B2 1 201 -15 1 1336 1378 99 21 0 chr15 98491995 98492186 -5002788 + B2_Mm2 SINE B2 1 195 0 1 1336 192 308 15 15 chr15 98492324 98492390 -5002584 - L2b LINE L2 -568 2851 2786 1 1336 344 324 34 27 chr15 98492432 98492578 -5002396 + ID_B1 SINE B4 73 219 -5 1 1336 1613 32 27 0 chr15 98493649 98493837 -5001137 - B2_Mm1t SINE B2 0 193 1 1 1336 854 188 188 27 chr15 98494451 98494637 -5000337 - B3 SINE B2 0 216 1 1 1336 1193 48 0 14 chr15 98494935 98495083 -4999891 - B1_Mm SINE Alu 0 147 2 1 1336 1013 191 4 95 chr15 98495446 98495678 -4999296 - B3 SINE B2 0 216 6 1 1336 1405 79 17 0 chr15 98495715 98495893 -4999081 + B2_Mm2 SINE B2 1 181 -14 1 1336 188 286 18 0 chr15 98495897 98495953 -4999021 - MIR SINE MIR -67 141 85 1 1336 450 230 54 82 chr15 98496349 98496496 -4998478 - B4 SINE B4 -148 144 2 1 1336 346 214 33 40 chr15 98496633 98496784 -4998190 + (TATAA)n Simple_repeat Simple_repeat 5 154 0 1 1336 393 274 45 36 chr15 98496870 98496980 -4997994 + ID_B1 SINE B4 94 204 -20 1 1336 838 158 13 46 chr15 98496980 98497133 -4997841 + B1_Mur4 SINE Alu 3 150 0 1 1336 256 254 28 0 chr15 98497241 98497312 -4997662 + PB1 SINE Alu 27 99 -28 1 1336 401 270 36 0 chr15 98497448 98497559 -4997415 + ID_B1 SINE B4 84 198 -26 1 1336 539 221 8 42 chr15 98497561 98497679 -4997295 + PB1D9 SINE Alu 1 114 -6 1 1336 732 282 22 33 chr15 98497883 98498066 -4996908 + B3A SINE B2 2 182 -16 1 1336 1041 151 43 11 chr15 98498119 98498306 -4996668 + B2_Mm2 SINE B2 1 193 -2 1 1336 302 238 155 0 chr15 98498317 98498401 -4996573 - PB1D10 SINE Alu -2 115 19 1 1336 223 283 0 91 chr15 98498362 98498407 -4996567 - ID_B1 SINE B4 -86 138 99 1 1336 2317 84 62 0 chr15 98498407 98498715 -4996259 + ORR1A2 LTR MaLR 1 327 0 1 1336 223 283 0 91 chr15 98498715 98498735 -4996239 - ID_B1 SINE B4 -126 98 79 1 1336 709 223 171 16 chr15 98498749 98498936 -4996038 - B3 SINE B2 0 216 1 1 1336 1424 87 0 44 chr15 98499210 98499414 -4995560 - B2_Mm2 SINE B2 0 195 1 1 1336 814 161 0 0 chr15 98499480 98499623 -4995351 + URR1A DNA MER1_type 79 221 -5 1 1336 489 316 113 10 chr15 98499631 98499826 -4995148 + MER20 DNA MER1_type 4 218 -1 1 1336 261 128 0 0 chr15 98499961 98500000 -4994974 + PB1D9 SINE Alu 5 43 -77 1 1336 808 49 0 10 chr15 98500001 98500105 -4994869 + B1_Mus2 SINE Alu 45 147 0 1 1336 246 81 0 0 chr15 98500105 98500142 -4994832 + (CAAAA)n Simple_repeat Simple_repeat 1 37 0 2 1336 327 149 0 130 chr15 98501332 98501409 -4993565 - RMER19C LTR ERVK -417 194 128 3 1336 1306 27 0 0 chr15 98501509 98501656 -4993318 + B1_Mus1 SINE Alu 2 148 0 4 1336 586 264 18 30 chr15 98501710 98501874 -4993100 - RSINE1 SINE B4 -2 163 2 5 1336 1445 79 16 0 chr15 98501918 98502107 -4992867 + B2_Mm2 SINE B2 2 193 -2 6 1336 419 262 116 41 chr15 98502178 98502325 -4992649 + RSINE1 SINE B4 2 159 -6 7 1336 248 191 14 14 chr15 98502445 98502514 -4992460 + T-rich Low_complexity Low_complexity 1 69 0 8 1336 376 212 168 4 chr15 98502514 98502645 -4992329 - PB1D10 SINE Alu 0 149 3 9 1336 435 38 0 0 chr15 98502888 98502941 -4992033 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1336 254 293 0 0 chr15 98503847 98503905 -4991069 - ID4_ SINE ID -7 76 19 1 1336 225 94 0 0 chr15 98503929 98503961 -4991013 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1336 1273 47 0 0 chr15 98503961 98504109 -4990865 - B1_Mus1 SINE Alu 0 148 1 1 1336 401 286 13 103 chr15 98504111 98504267 -4990707 - ID_B1 SINE B4 -1 223 82 1 1336 253 125 36 0 chr15 98506578 98506634 -4988340 + GA-rich Low_complexity Low_complexity 2 59 0 1 1336 21 0 0 0 chr15 98507340 98507361 -4987613 + GC_rich Low_complexity Low_complexity 1 21 0 1 1336 200 116 70 0 chr15 98508389 98508432 -4986542 + A-rich Low_complexity Low_complexity 1 46 0 1 1336 248 53 26 0 chr15 98508959 98508997 -4985977 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 1 1336 492 18 0 0 chr15 98509824 98509881 -4985093 + (GA)n Simple_repeat Simple_repeat 2 58 0 1 1336 339 25 0 0 chr15 98510084 98510124 -4984850 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1336 763 257 28 65 chr15 98510152 98510368 -4984606 + ID_B1 SINE B4 15 222 -2 2 1336 544 221 97 35 chr15 98510375 98510520 -4984454 + RSINE1 SINE B4 2 155 -10 2 1336 304 275 14 0 chr15 98510541 98510610 -4984364 - ID_B1 SINE B4 -65 159 90 2 1336 219 107 51 51 chr15 98510666 98510744 -4984230 + T-rich Low_complexity Low_complexity 1 78 0 2 1336 911 169 0 20 chr15 98510744 98510895 -4984079 - B1_Mus1 SINE Alu 0 148 1 2 1336 679 288 60 5 chr15 98511019 98511218 -4983756 + B3 SINE B2 2 211 -5 2 1336 247 329 87 47 chr15 98511665 98511837 -4983137 - B3 SINE B2 -28 188 10 2 1336 640 221 28 28 chr15 98511699 98511843 -4983131 - RSINE1 SINE B4 -17 148 5 2 1336 297 0 0 0 chr15 98511983 98512016 -4982958 + (TC)n Simple_repeat Simple_repeat 1 33 0 2 1336 585 220 197 56 chr15 98512867 98513045 -4981929 - B3 SINE B2 -13 203 1 3 1336 386 215 165 0 chr15 98513046 98513125 -4981849 - B1_Mur2 SINE Alu -55 94 3 3 1336 331 297 106 69 chr15 98513146 98513363 -4981611 - MER90a LTR ERV1 0 614 390 3 1336 830 305 49 4 chr15 98513376 98513639 -4981335 - MER90a LTR ERV1 -271 343 69 3 1336 357 82 0 0 chr15 98513931 98513980 -4980994 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1336 285 333 0 107 chr15 98514025 98514156 -4980818 + PB1 SINE Alu 9 125 -2 3 1336 279 286 14 0 chr15 98514169 98514239 -4980735 + ID4_ SINE ID 4 74 -9 3 1336 292 211 0 32 chr15 98514245 98514338 -4980636 + G-rich Low_complexity Low_complexity 1 90 0 3 1336 909 133 14 20 chr15 98514677 98514823 -4980151 - B1_Mur2 SINE Alu 0 149 5 3 1336 447 252 20 0 chr15 98514838 98514937 -4980037 - PB1D7 SINE Alu -10 110 10 3 1336 211 333 64 11 chr15 98514857 98514951 -4980023 - B4 SINE B4 -113 179 81 3 1336 375 141 0 0 chr15 98514958 98515022 -4979952 + (TCC)n Simple_repeat Simple_repeat 1 64 0 4 1336 285 300 47 0 chr15 98515022 98515097 -4979877 - BC1_Mm scRNA scRNA -5 78 1 4 1336 1471 74 16 0 chr15 98515214 98515404 -4979570 + B2_Mm2 SINE B2 2 194 -1 4 1336 420 258 31 62 chr15 98515422 98515550 -4979424 + ID_B1 SINE B4 82 205 -19 4 1336 291 54 0 0 chr15 98515553 98515590 -4979384 + (CAAG)n Simple_repeat Simple_repeat 3 39 0 4 1336 210 71 0 0 chr15 98515591 98515619 -4979355 + (GGA)n Simple_repeat Simple_repeat 3 30 0 4 1336 1463 221 128 79 chr15 98515826 98516382 -4978592 - RMER4B LTR ERVK 0 585 3 4 1336 671 161 34 0 chr15 98516521 98516639 -4978335 + B3 SINE B2 94 215 -1 4 1336 180 176 0 0 chr15 98516640 98516674 -4978300 + (TAA)n Simple_repeat Simple_repeat 1 34 0 4 1336 1362 87 27 0 chr15 98516930 98517113 -4977861 - B2_Mm1t SINE B2 -4 189 2 4 1336 671 256 32 6 chr15 98517146 98517303 -4977671 - RSINE1 SINE B4 -2 163 3 5 1336 919 233 0 132 chr15 98517325 98517567 -4977407 - B3 SINE B2 -6 210 1 5 1336 278 26 26 0 chr15 98517584 98517623 -4977351 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 5 1336 1168 45 0 0 chr15 98517623 98517757 -4977217 - B1_Mus2 SINE Alu -13 134 1 5 1336 241 308 16 71 chr15 98517782 98517908 -4977066 + ID4 SINE ID 3 121 -31 5 1336 217 286 33 0 chr15 98517939 98518009 -4976965 - MIRm SINE MIR -114 154 84 5 1336 310 231 89 13 chr15 98518016 98518095 -4976879 + PB1D10 SINE Alu 2 86 -31 5 1336 468 0 0 0 chr15 98518101 98518153 -4976821 + (TC)n Simple_repeat Simple_repeat 1 52 0 5 1336 384 22 0 0 chr15 98518153 98518197 -4976777 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1336 298 220 85 0 chr15 98518682 98518741 -4976233 + ID_B1 SINE B4 155 218 -6 5 1336 281 243 0 114 chr15 98518790 98518869 -4976105 - ORR1D2 LTR MaLR 0 370 301 6 1336 1713 159 15 201 chr15 98519301 98519764 -4975210 - ORR1C1 LTR MaLR 0 378 2 6 1336 277 273 185 15 chr15 98520137 98520267 -4974707 - MamRep1161 DNA TcMar -804 153 2 6 1336 346 278 69 38 chr15 98520344 98520475 -4974499 + MIRc SINE MIR 2 136 -132 6 1336 952 232 67 0 chr15 98520510 98520704 -4974270 + ID_B1 SINE B4 1 207 -17 6 1336 2194 103 111 8 chr15 98520767 98521129 -4973845 - MTB_Mm LTR MaLR -8 399 1 6 1336 258 0 47 23 chr15 98522487 98522530 -4972444 + (CAAA)n Simple_repeat Simple_repeat 4 47 0 6 1336 208 172 106 0 chr15 98522547 98522607 -4972367 + MIRc SINE MIR 108 177 -85 6 1336 438 200 171 0 chr15 98523116 98523221 -4971753 + ID_B1 SINE B4 102 224 0 6 1336 929 226 59 0 chr15 98523258 98523462 -4971512 + B3 SINE B2 1 216 0 6 1336 456 182 118 29 chr15 98523494 98523596 -4971378 + B1_Mus2 SINE Alu 37 147 0 6 1336 1619 52 0 0 chr15 98523600 98523792 -4971182 + B2_Mm1a SINE B2 1 192 -1 7 1336 755 191 0 6 chr15 98523806 98523969 -4971005 + GA-rich Low_complexity Low_complexity 3 164 0 7 1336 942 105 20 27 chr15 98524254 98524401 -4970573 + B1_Mus2 SINE Alu 2 147 0 7 1336 942 62 43 9 chr15 98524507 98524661 -4970313 - MT2_Mm LTR ERVL 0 601 374 7 1336 403 289 75 111 chr15 98524791 98525017 -4969957 + ID_B1 SINE B4 7 224 0 7 1336 714 270 107 0 chr15 98525054 98525232 -4969742 + B3 SINE B2 3 199 -17 7 1336 333 0 0 0 chr15 98525233 98525270 -4969704 + (TAAAA)n Simple_repeat Simple_repeat 5 41 0 7 1336 241 301 75 106 chr15 98525285 98525352 -4969622 + RSINE1 SINE B4 11 89 -76 7 1336 2783 128 17 2 chr15 98525352 98525767 -4969207 - MTC LTR MaLR 0 421 1 7 1336 241 301 75 106 chr15 98525767 98525859 -4969115 + RSINE1 SINE B4 90 165 0 7 1336 324 284 58 58 chr15 98525997 98526040 -4968934 + ID_B1 SINE B4 52 98 -126 7 1336 228 67 0 0 chr15 98526040 98526070 -4968904 + (CGG)n Simple_repeat Simple_repeat 2 31 0 8 1336 324 284 58 58 chr15 98526070 98526198 -4968776 + ID_B1 SINE B4 99 223 -1 7 1336 688 134 38 38 chr15 98526071 98526203 -4968771 + B1_Mur3 SINE Alu 18 149 0 8 1336 183 237 26 0 chr15 98526503 98526541 -4968433 - MIR SINE MIR -149 113 75 8 1336 496 306 0 0 chr15 98527123 98527270 -4967704 + RSINE1 SINE B4 3 149 -16 8 1336 360 119 0 0 chr15 98527278 98527337 -4967637 + (CATA)n Simple_repeat Simple_repeat 1 59 0 8 1336 1469 77 0 15 chr15 98527368 98527565 -4967409 + B2_Mm2 SINE B2 2 195 0 8 1336 218 333 92 22 chr15 98527583 98527767 -4967207 - L2b LINE L2 -136 3239 3043 8 1336 39 22 0 0 chr15 98527819 98527865 -4967109 + AT_rich Low_complexity Low_complexity 1 46 0 8 1336 891 226 10 1 chr15 98527879 98528059 -4966915 - B3 SINE B2 -4 194 9 8 1336 582 234 231 45 chr15 98528192 98528434 -4966540 + B4 SINE B4 2 288 -4 8 1336 293 130 0 0 chr15 98528493 98528547 -4966427 - MT2A LTR ERVL -1 532 479 9 1336 421 244 18 18 chr15 98528597 98528798 -4966176 + (TA)n Simple_repeat Simple_repeat 1 201 0 9 1336 1573 37 0 21 chr15 98528877 98529069 -4965905 - B2_Mm1a SINE B2 -4 189 2 9 1336 796 283 58 30 chr15 98529076 98529403 -4965571 - MT2B LTR ERVL -59 542 94 9 1336 1304 88 55 0 chr15 98529407 98529588 -4965386 + B2_Mm2 SINE B2 5 195 0 9 1336 427 357 26 0 chr15 98530565 98530719 -4964255 + MIR SINE MIR 102 259 -3 9 1336 702 203 21 21 chr15 98530804 98530932 -4964042 + ID_B1 SINE B4 84 212 -12 9 1336 654 49 0 0 chr15 98530932 98531014 -4963960 + (GGA)n Simple_repeat Simple_repeat 3 84 0 9 1336 702 203 21 21 chr15 98531014 98531026 -4963948 + ID_B1 SINE B4 213 224 0 9 1336 516 129 39 34 chr15 98531053 98531294 -4963680 + (TCTCTG)n Simple_repeat Simple_repeat 1 242 0 9 1336 190 70 0 85 chr15 98531307 98531354 -4963620 + (TCTCTG)n Simple_repeat Simple_repeat 2 44 0 9 1336 750 349 26 15 chr15 98531412 98531680 -4963294 - B4A SINE B4 -20 272 2 9 1336 194 174 22 0 chr15 98531941 98531987 -4962987 + GA-rich Low_complexity Low_complexity 4 50 0 1 1336 757 184 12 0 chr15 98532327 98532490 -4962484 + GA-rich Low_complexity Low_complexity 2 166 0 1 1336 592 236 34 14 chr15 98532507 98532653 -4962321 + B1_Mur1 SINE Alu 1 149 0 1 1336 444 315 95 7 chr15 98532690 98532837 -4962137 - ID_B1 SINE B4 0 224 65 1 1336 432 342 91 14 chr15 98532838 98533191 -4961783 + L1M5 LINE L1 4482 4861 -1285 1 1336 289 229 28 28 chr15 98533516 98533588 -4961386 + RSINE1 SINE B4 3 74 -91 1 1336 423 0 0 0 chr15 98533617 98533664 -4961310 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1336 383 292 30 30 chr15 98533724 98533858 -4961116 + ID_B1 SINE B4 70 203 -21 1 1336 681 168 35 0 chr15 98533746 98533859 -4961115 + B1_Mur4 SINE Alu 12 128 -22 1 1336 897 126 0 0 chr15 98533883 98534026 -4960948 + (GAGAA)n Simple_repeat Simple_repeat 3 145 0 1 1336 512 236 57 0 chr15 98534031 98534137 -4960837 + ID_B1 SINE B4 112 223 -1 1 1336 1037 281 69 45 chr15 98534282 98534675 -4960299 + ERVL-int LTR ERVL 4909 5316 -441 1 1336 3833 123 172 17 chr15 98534675 98535310 -4959664 - RMER19A LTR ERVK 0 737 5 1 1336 1037 281 69 45 chr15 98535310 98535378 -4959596 + ERVL-int LTR ERVL 5317 5381 -376 1 1336 864 168 35 0 chr15 98535424 98535567 -4959407 + B1_Mur1 SINE Alu 1 148 -1 1 1336 600 301 56 10 chr15 98535607 98535802 -4959172 - B3 SINE B2 -12 204 1 1 1336 652 200 65 29 chr15 98535817 98535956 -4959018 - B1_Mur4 SINE Alu 0 150 7 1 1336 1116 42 0 0 chr15 98535973 98536115 -4958859 + (TC)n Simple_repeat Simple_repeat 1 142 0 1 1336 1449 29 40 23 chr15 98536115 98536291 -4958683 - B2_Mm2 SINE B2 -15 180 2 1 1336 469 245 15 71 chr15 98536433 98536638 -4958336 - B3 SINE B2 0 193 1 1 1336 403 283 69 94 chr15 98536700 98536726 -4958248 - B4 SINE B4 -46 246 173 1 1336 911 152 0 7 chr15 98536726 98536865 -4958109 - B1_Mus2 SINE Alu -5 142 5 1 1336 403 283 69 94 chr15 98536865 98536906 -4958068 - B4 SINE B4 -46 172 48 1 1336 261 57 0 0 chr15 98537130 98537165 -4957809 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 1 1336 21 0 0 0 chr15 98537346 98537367 -4957607 + AT_rich Low_complexity Low_complexity 1 21 0 1 1336 1287 12 133 18 chr15 98537378 98537543 -4957431 + B2_Mm1a SINE B2 2 185 -8 1 1336 753 114 97 0 chr15 98537543 98537657 -4957317 + B2_Mm2 SINE B2 1 125 -70 1 1336 369 0 0 0 chr15 98537695 98537736 -4957238 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 1336 323 231 15 194 chr15 98537746 98537880 -4957094 + PB1D9 SINE Alu 1 110 -10 1 1336 1084 221 5 5 chr15 98537893 98538098 -4956876 - B3 SINE B2 -6 210 6 1 1336 405 245 18 45 chr15 98538122 98538233 -4956741 - B3A SINE B2 -2 196 89 1 1336 521 234 9 9 chr15 98538314 98538426 -4956548 + B3 SINE B2 105 216 0 1 1336 225 0 0 0 chr15 98538486 98538511 -4956463 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1336 1214 50 0 0 chr15 98539666 98539806 -4955168 + B1_Mus2 SINE Alu 4 143 -4 1 1336 532 179 17 0 chr15 98539814 98539931 -4955043 + GA-rich Low_complexity Low_complexity 2 120 0 1 1336 187 189 0 36 chr15 98540006 98540061 -4954913 + (TTA)n Simple_repeat Simple_repeat 2 54 0 1 1336 192 77 0 0 chr15 98540082 98540108 -4954866 + (TTA)n Simple_repeat Simple_repeat 1 26 0 1 1336 406 306 29 22 chr15 98540109 98540246 -4954728 - ID_B1 SINE B4 -8 216 79 1 1336 185 309 51 41 chr15 98540416 98540514 -4954460 - MIR3 SINE MIR -52 156 58 1 1336 664 109 29 10 chr15 98540526 98540628 -4954346 - B1_Mur2 SINE Alu 0 149 46 1 1336 308 253 95 0 chr15 98540801 98540896 -4954078 - PB1D10 SINE Alu -11 106 3 1 1336 422 178 370 0 chr15 98540983 98541118 -4953856 + B2_Mm2 SINE B2 1 185 -10 1 1336 291 250 49 12 chr15 98541121 98541202 -4953772 - RSINE1 SINE B4 0 165 82 1 1336 230 0 33 0 chr15 98541775 98541805 -4953169 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1 1336 637 189 97 52 chr15 98541811 98541945 -4953029 - B1_Mur1 SINE Alu 0 149 10 1 1336 254 121 356 61 chr15 98542024 98542139 -4952835 - B2_Mm2 SINE B2 -1 194 46 1 1336 1310 101 11 0 chr15 98542151 98542329 -4952645 - B2_Mm1t SINE B2 -13 180 1 1 1336 1051 140 197 0 chr15 98542479 98542657 -4952317 - B3 SINE B2 0 216 4 1 1336 3515 28 2 0 chr15 98542657 98543052 -4951922 - MTA_Mm LTR MaLR 0 396 1 1 1336 351 270 0 0 chr15 98543076 98543150 -4951824 - ID4 SINE ID -8 75 2 1 1336 383 55 0 18 chr15 98543167 98543222 -4951752 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1336 426 225 45 9 chr15 98543309 98543421 -4951553 + B3 SINE B2 2 117 -99 1 1336 723 169 23 8 chr15 98543390 98543521 -4951453 + B1_Mus2 SINE Alu 14 146 -1 1 1336 304 315 114 59 chr15 98543421 98543545 -4951429 + B4A SINE B4 2 250 -42 1 1336 242 206 0 16 chr15 98543599 98543663 -4951311 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 1336 516 286 68 7 chr15 98543686 98543834 -4951140 - RSINE1 SINE B4 -1 164 8 1 1336 1332 77 27 16 chr15 98543890 98544075 -4950899 + B2_Mm2 SINE B2 2 188 -7 1 1336 724 184 8 0 chr15 98544097 98544222 -4950752 - B1_Mur2 SINE Alu -17 132 7 1 1336 423 275 18 84 chr15 98544222 98544269 -4950705 - ID_B1 SINE B4 -82 210 43 1 1336 362 227 114 35 chr15 98544320 98544434 -4950540 - MLT1G3 LTR MaLR 0 489 367 1 1336 375 215 62 45 chr15 98544542 98544654 -4950320 + RMER15 LTR ERVL 88 201 -374 1 1336 424 285 86 115 chr15 98544870 98545148 -4949826 - MLT1G3 LTR MaLR -212 383 114 1 1336 829 242 21 26 chr15 98545253 98545271 -4949703 - B3A SINE B2 -8 190 176 1 1336 222 37 0 0 chr15 98545271 98545298 -4949676 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 1336 829 242 21 26 chr15 98545298 98545470 -4949504 - B3A SINE B2 -23 175 1 1 1336 406 256 0 0 chr15 98545710 98545788 -4949186 - ID4 SINE ID -5 78 1 1 1336 550 212 0 30 chr15 98545803 98545914 -4949060 + B1_Mur3 SINE Alu 3 110 -10 1 1336 183 80 0 0 chr15 98545938 98545963 -4949011 + (TCTG)n Simple_repeat Simple_repeat 3 27 0 1 1336 267 31 0 0 chr15 98545963 98545994 -4948980 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1336 241 292 118 36 chr15 98545996 98546106 -4948868 - B1F SINE Alu -20 129 11 1 1336 810 206 43 142 chr15 98546270 98546432 -4948542 - B3 SINE B2 -1 215 54 1 1336 1202 62 7 0 chr15 98546432 98546578 -4948396 + B1_Mm SINE Alu 1 147 0 1 1336 810 206 43 142 chr15 98546578 98546647 -4948327 - B3 SINE B2 -163 53 7 1 1336 668 211 14 36 chr15 98546666 98546804 -4948170 - B1_Mur1 SINE Alu -3 146 12 1 1336 551 216 10 0 chr15 98546847 98546949 -4948025 + B3A SINE B2 3 105 -93 1 1336 312 27 0 0 chr15 98546963 98547000 -4947974 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 1 1336 391 136 0 12 chr15 98547052 98547166 -4947808 - B2_Mm2 SINE B2 0 195 47 1 1336 1261 107 11 11 chr15 98547213 98547392 -4947582 - B2_Mm1t SINE B2 -14 179 1 1 1336 383 0 0 21 chr15 98547588 98547636 -4947338 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1336 433 253 93 33 chr15 98547636 98547787 -4947187 - B4A SINE B4 -47 245 86 1 1336 205 185 0 71 chr15 98548337 98548372 -4946602 + polypyrimidine Low_complexity Low_complexity 33 66 0 1 1336 1190 88 0 0 chr15 98548372 98548519 -4946455 - B1_Mus2 SINE Alu 0 147 1 1 1336 205 185 0 71 chr15 98548519 98548536 -4946438 + polypyrimidine Low_complexity Low_complexity 18 32 0 1 1336 1654 26 5 0 chr15 98548536 98548728 -4946246 - B2_Mm1t SINE B2 0 193 1 1 1336 205 185 0 71 chr15 98548728 98548744 -4946230 + polypyrimidine Low_complexity Low_complexity 3 17 0 1 1336 501 62 0 0 chr15 98548760 98548825 -4946149 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 1336 276 30 0 0 chr15 98548900 98548933 -4946041 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 1 1336 859 151 7 28 chr15 98548933 98549071 -4945903 - B1_Mur3 SINE Alu -9 140 5 1 1336 1069 238 43 32 chr15 98549459 98549737 -4945237 - Lx6 LINE L1 -26 7434 7154 1 1336 324 0 0 0 chr15 98549738 98549774 -4945200 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1 1336 197 284 101 63 chr15 98549778 98549936 -4945038 - MIR3 SINE MIR -41 167 4 1 1336 401 310 94 117 chr15 98550000 98550223 -4944751 - ID_B1 SINE B4 -5 219 2 1 1336 338 73 356 10 chr15 98550311 98550412 -4944562 - B2_Mm2 SINE B2 -2 193 58 1 1336 956 58 260 0 chr15 98550446 98550600 -4944374 + B2_Mm2 SINE B2 2 195 0 1 1336 774 122 26 0 chr15 98550646 98550761 -4944213 + B1_Mus2 SINE Alu 30 147 0 1 1336 264 59 0 0 chr15 98550766 98550800 -4944174 + (A)n Simple_repeat Simple_repeat 1 34 0 1 1336 531 0 0 0 chr15 98551823 98551882 -4943092 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1336 460 251 68 34 chr15 98552158 98552335 -4942639 + RLTR42-int LTR ERVK 4253 4435 -1087 1 1336 189 0 0 0 chr15 98553648 98553669 -4941305 + (CAGA)n Simple_repeat Simple_repeat 1 21 0 1 1336 291 54 0 0 chr15 98553793 98553830 -4941144 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 1 1336 566 161 0 85 chr15 98553836 98553965 -4941009 + B1_Mur4 SINE Alu 3 120 -30 1 1336 260 358 0 60 chr15 98554475 98554591 -4940383 + PB1D10 SINE Alu 1 109 -8 1 1336 306 239 106 35 chr15 98554598 98554711 -4940263 + RSINE1 SINE B4 8 128 -37 1 1336 195 42 0 0 chr15 98555139 98555163 -4939811 + (CGGGG)n Simple_repeat Simple_repeat 1 24 0 1 1336 852 242 43 5 chr15 98555484 98555692 -4939282 - B3 SINE B2 0 216 1 1 1336 658 147 0 49 chr15 98555967 98556089 -4938885 - B1_Mur2 SINE Alu 0 149 34 1 1336 288 293 196 20 chr15 98555990 98556143 -4938831 - B4 SINE B4 -71 221 42 2 1336 1232 34 7 20 chr15 98556155 98556304 -4938670 - B1_Mus1 SINE Alu 0 148 2 2 1336 1297 95 15 55 chr15 98556335 98556535 -4938439 + B2_Mm2 SINE B2 1 192 -3 2 1336 196 310 18 99 chr15 98558885 98558996 -4935978 - MIRm SINE MIR -160 116 15 2 1336 187 290 43 0 chr15 98559568 98559637 -4935337 + L2 LINE L2 1773 1844 -1575 2 1336 221 254 92 66 chr15 98559706 98559782 -4935192 - ID4 SINE ID -4 79 2 2 1336 623 191 206 77 chr15 98559811 98559981 -4934993 + B3A SINE B2 1 192 -3 2 1336 497 267 17 17 chr15 98559996 98560114 -4934860 + PB1D9 SINE Alu 3 120 0 2 1336 750 191 0 0 chr15 98560375 98560511 -4934463 - B1_Mus2 SINE Alu 0 147 12 2 1336 27 29 0 0 chr15 98560555 98560589 -4934385 + AT_rich Low_complexity Low_complexity 1 34 0 2 1336 482 204 135 10 chr15 98561171 98561275 -4933699 - PB1D10 SINE Alu 0 117 1 2 1336 228 276 9 117 chr15 98561724 98561835 -4933139 + MT2B LTR ERVL 156 254 -347 2 1336 483 238 0 19 chr15 98561736 98561843 -4933131 + B1_Mus1 SINE Alu 4 108 -40 2 1336 248 372 75 31 chr15 98561743 98561904 -4933070 + B4 SINE B4 95 262 -30 2 1336 1237 80 4 169 chr15 98562047 98562231 -4932743 - B2_Mm1a SINE B2 -4 189 35 2 1336 1241 48 0 0 chr15 98562231 98562378 -4932596 - B1_Mus2 SINE Alu 0 147 1 2 1336 1237 80 4 169 chr15 98562378 98562418 -4932556 - B2_Mm1a SINE B2 -159 34 2 2 1336 747 206 58 43 chr15 98562549 98562757 -4932217 + ID_B1 SINE B4 2 212 -12 2 1336 657 203 0 30 chr15 98562900 98563032 -4931942 - B1_Mur1 SINE Alu -21 128 1 2 1336 785 212 175 0 chr15 98563231 98563420 -4931554 - URR1A DNA MER1_type -4 222 1 2 1336 323 196 31 61 chr15 98563558 98563656 -4931318 - PB1D10 SINE Alu 0 117 23 2 1336 523 201 186 7 chr15 98563593 98563733 -4931241 - ID_B1 SINE B4 -57 167 3 2 1336 579 243 81 0 chr15 98563765 98563901 -4931073 - B1_Mur3 SINE Alu -1 148 2 2 1337 1336 86 48 11 chr15 98566194 98566382 -4928592 - B2_Mm2 SINE B2 0 195 1 2 1337 495 220 0 0 chr15 98566424 98566515 -4928459 - B1F2 SINE Alu -57 92 2 2 1337 344 319 43 29 chr15 98566515 98566563 -4928411 - ID_B1 SINE B4 -54 170 30 2 1337 574 205 36 36 chr15 98566624 98566761 -4928213 + B1_Mur3 SINE Alu 12 148 -1 2 1337 539 114 121 34 chr15 98567480 98567601 -4927373 + PB1D9 SINE Alu 7 147 0 2 1337 622 113 208 0 chr15 98567658 98567764 -4927210 - URR1A DNA MER1_type -98 128 1 2 1337 1245 62 0 0 chr15 98568890 98569066 -4925908 + (CA)n Simple_repeat Simple_repeat 2 177 0 2 1337 217 0 0 57 chr15 98570588 98570623 -4924351 + (GGA)n Simple_repeat Simple_repeat 1 33 0 2 1337 752 226 26 1 chr15 98572042 98572205 -4922769 + B3 SINE B2 2 169 -29 2 1337 234 62 0 0 chr15 98572205 98572237 -4922737 + (CATA)n Simple_repeat Simple_repeat 3 34 0 2 1337 634 267 38 16 chr15 98572237 98572256 -4922718 + B3A SINE B2 170 188 -10 2 1337 1023 56 8 6 chr15 98572488 98572637 -4922337 + B1_Mus2 SINE Alu 5 147 0 2 1337 198 357 111 31 chr15 98573418 98573580 -4921394 + MIR3 SINE MIR 22 196 -12 2 1337 310 324 76 0 chr15 98573930 98574075 -4920899 + L2 LINE L2 2740 2895 -524 2 1337 330 216 67 67 chr15 98574590 98574694 -4920280 - B3A SINE B2 -92 106 3 2 1337 565 252 38 0 chr15 98574704 98574835 -4920139 - ID_B1 SINE B4 -8 216 81 2 1337 234 0 0 0 chr15 98576098 98576124 -4918850 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 1337 684 75 71 0 chr15 98576124 98576239 -4918735 - B1_Mus1 SINE Alu -9 139 17 2 1337 537 271 0 17 chr15 98576361 98576481 -4918493 + ID_B1 SINE B4 79 196 -28 2 1337 601 286 97 0 chr15 98576871 98577056 -4917918 - B3 SINE B2 -12 204 2 2 1337 238 300 83 39 chr15 98577187 98577343 -4917631 + RSINE1 SINE B4 3 165 0 2 1337 431 291 80 13 chr15 98577564 98577714 -4917260 - RSINE1 SINE B4 -4 161 2 2 1337 3128 56 0 13 chr15 98579046 98579441 -4915533 - L1Md_F2 LINE L1 0 6582 6193 2 1337 638 191 87 14 chr15 98579595 98579733 -4915241 - B1F2 SINE Alu -1 148 1 2 1337 282 312 127 8 chr15 98579742 98579760 -4915214 - B4 SINE B4 -57 235 95 2 1337 489 209 56 28 chr15 98579760 98579868 -4915106 - PB1D9 SINE Alu 0 120 10 2 1337 383 287 26 9 chr15 98580057 98580173 -4914801 + ID_B1 SINE B4 29 146 -78 2 1337 240 231 14 122 chr15 98580324 98580398 -4914576 + 4.5SRNA scRNA scRNA 23 88 -6 2 1337 409 196 103 0 chr15 98580345 98580442 -4914532 + B1_Mus1 SINE Alu 37 143 -5 2 1337 1204 106 28 0 chr15 98580545 98580725 -4914249 + B2_Mm2 SINE B2 8 192 -3 2 1337 404 315 48 18 chr15 98580779 98580947 -4914027 - B3A SINE B2 0 198 26 2 1337 439 263 35 0 chr15 98581349 98581463 -4913511 + PB1D7 SINE Alu 1 118 -2 2 1337 690 244 37 41 chr15 98581473 98581691 -4913283 + B4 SINE B4 9 225 -67 2 1337 1024 67 89 0 chr15 98581723 98581858 -4913116 - B1_Mus2 SINE Alu 0 147 1 2 1337 1390 65 42 16 chr15 98581858 98582046 -4912928 - B2_Mm2 SINE B2 0 195 2 2 1337 198 0 0 0 chr15 98582109 98582131 -4912843 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 1337 263 324 0 0 chr15 98582180 98582248 -4912726 + RSINE1 SINE B4 2 69 -96 2 1337 423 100 27 0 chr15 98582319 98582421 -4912553 - B2_Mm2 SINE B2 -8 187 47 2 1337 1334 85 11 0 chr15 98582449 98582625 -4912349 - B2_Mm1t SINE B2 -14 179 2 2 1337 594 238 175 11 chr15 98582744 98582927 -4912047 + B3 SINE B2 1 213 -3 2 1337 288 159 77 1 chr15 98582991 98583071 -4911903 + PB1D10 SINE Alu 27 111 -38 2 1337 1236 48 0 7 chr15 98583212 98583360 -4911614 + B1_Mm SINE Alu 1 147 0 2 1337 348 306 30 7 chr15 98583374 98583509 -4911465 - L1MB3 LINE L1 -32 6151 6014 2 1337 280 338 0 0 chr15 98583615 98583686 -4911288 - RSINE1 SINE B4 -31 134 64 2 1337 1485 223 83 11 chr15 98583745 98584108 -4910866 + MTD LTR MaLR 18 406 -13 2 1337 315 197 53 0 chr15 98584221 98584297 -4910677 + ID_B1 SINE B4 145 224 0 2 1337 721 190 0 47 chr15 98584312 98584461 -4910513 + B1_Mur1 SINE Alu 7 148 -1 2 1337 501 206 28 0 chr15 98584549 98584656 -4910318 - B3 SINE B2 -7 209 100 2 1337 2063 228 94 8 chr15 98584791 98585465 -4909509 + Lx6 LINE L1 6517 7460 0 2 1337 694 216 104 6 chr15 98585631 98585813 -4909161 + B3 SINE B2 1 200 -16 2 1337 284 236 243 9 chr15 98586321 98586428 -4908546 + B1_Mur2 SINE Alu 11 142 -7 2 1337 438 261 0 0 chr15 98586432 98586524 -4908450 + RSINE1 SINE B4 10 101 -64 2 1337 813 65 0 0 chr15 98586530 98586638 -4908336 + (CA)n Simple_repeat Simple_repeat 1 108 0 2 1337 194 0 39 0 chr15 98586689 98586715 -4908259 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1337 1156 75 0 7 chr15 98586715 98586853 -4908121 - B1_Mus2 SINE Alu -9 138 1 2 1337 481 249 192 17 chr15 98586910 98587082 -4907892 + B3 SINE B2 9 210 -6 2 1337 661 135 62 9 chr15 98587083 98587195 -4907779 - PB1D9 SINE Alu -1 119 2 2 1337 846 275 24 0 chr15 98587447 98587654 -4907320 + ID_B1 SINE B4 2 213 -11 2 1337 1274 34 0 0 chr15 98587875 98588023 -4906951 + B1_Mus1 SINE Alu 1 148 0 2 1337 225 94 0 0 chr15 98588105 98588137 -4906837 + (A)n Simple_repeat Simple_repeat 1 32 0 2 1337 314 148 0 0 chr15 98588157 98588211 -4906763 + B1_Mur4 SINE Alu 6 59 -91 2 1337 721 244 64 10 chr15 98588221 98588424 -4906550 + B3 SINE B2 1 214 -2 2 1337 396 0 0 0 chr15 98588436 98588480 -4906494 + (TCCA)n Simple_repeat Simple_repeat 4 47 0 2 1337 661 213 0 0 chr15 98588480 98588602 -4906372 - B1_Mur1 SINE Alu -13 136 15 2 1337 432 270 99 28 chr15 98588772 98588911 -4906063 - RSINE1 SINE B4 0 165 17 2 1337 833 146 57 0 chr15 98588911 98589069 -4905905 - URR1B DNA MER1_type 0 225 59 2 1337 747 218 65 30 chr15 98589172 98589371 -4905603 + B3 SINE B2 9 214 -2 2 1337 360 235 39 48 chr15 98589367 98589470 -4905504 - B1_Mur1 SINE Alu -43 106 5 2 1337 321 316 70 43 chr15 98589774 98589959 -4905015 - ID_B1 SINE B4 0 224 35 2 1337 473 268 51 6 chr15 98589845 98590023 -4904951 - B3 SINE B2 0 193 1 2 1337 198 71 0 0 chr15 98590035 98590063 -4904911 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 1337 1199 22 0 0 chr15 98590063 98590197 -4904777 - B1_Mus2 SINE Alu -13 134 1 2 1337 665 239 94 20 chr15 98590338 98590539 -4904435 - B3 SINE B2 0 216 1 2 1337 305 245 65 19 chr15 98590599 98590707 -4904267 - B3A SINE B2 -72 126 14 2 1337 423 248 21 107 chr15 98590871 98591011 -4903963 - RSINE1 SINE B4 -35 130 3 2 1337 371 341 40 40 chr15 98591299 98591560 -4903414 - MIR SINE MIR -23 245 4 2 1337 217 238 0 0 chr15 98591949 98591991 -4902983 + GA-rich Low_complexity Low_complexity 3 44 0 2 1337 312 197 41 27 chr15 98594308 98594381 -4900593 - B2_Mm1t SINE B2 -119 74 1 2 1337 601 179 0 51 chr15 98594557 98594675 -4900299 + B1_Mur4 SINE Alu 5 116 -34 2 1337 807 186 7 14 chr15 98595069 98595216 -4899758 - B1_Mur1 SINE Alu -2 147 2 3 1337 326 319 103 42 chr15 98595224 98595400 -4899574 - B3A SINE B2 0 216 31 3 1337 246 268 42 14 chr15 98595426 98595498 -4899476 - B4 SINE B4 -217 75 2 3 1337 1311 201 155 21 chr15 98595544 98595879 -4899095 + MTD LTR MaLR 1 380 -39 3 1337 926 223 26 225 chr15 98595877 98596273 -4898701 + MTD-int LTR MaLR 10 375 -723 3 1337 187 54 54 0 chr15 98596273 98596310 -4898664 + (CAA)n Simple_repeat Simple_repeat 2 40 0 3 1337 1460 272 75 119 chr15 98596310 98596904 -4898070 + MTD-int LTR MaLR 313 1092 -166 3 1337 1650 42 0 0 chr15 98596904 98597095 -4897879 + B2_Mm1a SINE B2 2 192 -1 3 1337 1460 247 82 100 chr15 98597095 98597278 -4897696 + MTD-int LTR MaLR 955 1256 -2 3 1337 1739 198 37 81 chr15 98597279 98597465 -4897509 + MTD LTR MaLR 1 181 -238 3 1337 762 244 84 30 chr15 98597465 98597668 -4897306 + B3 SINE B2 2 215 -1 3 1337 1739 198 37 81 chr15 98597668 98597705 -4897269 + MTD LTR MaLR 182 209 -210 3 1337 719 204 13 26 chr15 98597705 98597856 -4897118 + B1_Mur3 SINE Alu 1 149 0 3 1337 1739 198 37 81 chr15 98597856 98598061 -4896913 + MTD LTR MaLR 210 411 -8 3 1337 1250 21 7 0 chr15 98598071 98598216 -4896758 + B1_Mus2 SINE Alu 1 146 -1 3 1337 956 250 0 44 chr15 98599335 98599561 -4895413 - B3 SINE B2 0 216 1 3 1337 712 165 8 0 chr15 98599587 98599708 -4895266 - B1_Mur4 SINE Alu 0 150 29 3 1337 848 191 39 0 chr15 98599883 98600061 -4894913 - B3 SINE B2 -2 214 30 3 1337 581 176 0 27 chr15 98600161 98600272 -4894702 - B1_Mur4 SINE Alu -1 149 42 3 1337 1465 64 43 0 chr15 98600296 98600483 -4894491 - B2_Mm2 SINE B2 0 195 1 3 1337 766 197 18 2 chr15 98600483 98600661 -4894313 - B3 SINE B2 -9 189 1 3 1337 749 98 41 0 chr15 98600695 98600818 -4894156 - B1_Mus2 SINE Alu 0 147 20 3 1337 406 340 19 32 chr15 98600910 98601065 -4893909 + RSINE1 SINE B4 4 156 -9 3 1337 390 42 0 0 chr15 98601074 98601122 -4893852 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1337 425 277 72 7 chr15 98601275 98601413 -4893561 + B1F SINE Alu 1 147 -2 3 1337 288 297 62 18 chr15 98601634 98601747 -4893227 + MER58A DNA MER1_type 2 119 -105 3 1337 271 293 27 0 chr15 98601800 98601875 -4893099 + MER58A DNA MER1_type 128 204 -20 3 1337 223 135 0 0 chr15 98602044 98602081 -4892893 + L4 LINE RTE 1989 2025 -4 3 1337 886 30 101 115 chr15 98603585 98603733 -4891241 + B1_Mus2 SINE Alu 2 147 0 3 1337 565 244 0 24 chr15 98603796 98603922 -4891052 + B3 SINE B2 1 123 -93 3 1337 809 129 0 35 chr15 98603896 98604024 -4890950 + B2_Mm2 SINE B2 33 155 -40 3 1337 207 0 0 0 chr15 98604024 98604047 -4890927 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 3 1337 809 129 0 35 chr15 98604047 98604062 -4890912 + B2_Mm2 SINE B2 156 170 -25 3 1337 545 205 0 17 chr15 98604062 98604181 -4890793 + B3 SINE B2 100 216 0 3 1337 195 69 0 0 chr15 98604181 98604210 -4890764 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1337 284 242 115 10 chr15 98604403 98604499 -4890475 + PB1D10 SINE Alu 1 106 -11 3 1337 234 0 0 0 chr15 98605024 98605050 -4889924 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1337 439 186 93 0 chr15 98605057 98605143 -4889831 - PB1D7 SINE Alu -18 102 9 3 1337 220 267 0 0 chr15 98605170 98605215 -4889759 + MIRc SINE MIR 57 101 -167 3 1337 833 113 53 13 chr15 98605310 98605462 -4889512 - URR1A DNA MER1_type 0 226 69 3 1337 338 0 0 23 chr15 98608190 98608233 -4886741 + (TCTG)n Simple_repeat Simple_repeat 1 42 0 3 1337 22 35 0 0 chr15 98608438 98608467 -4886507 + GC_rich Low_complexity Low_complexity 1 29 0 3 1337 207 0 0 0 chr15 98608687 98608710 -4886264 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1337 189 0 0 0 chr15 98609297 98609318 -4885656 + (G)n Simple_repeat Simple_repeat 1 21 0 3 1337 324 0 0 0 chr15 98610202 98610238 -4884736 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1337 748 152 17 22 chr15 98610238 98610380 -4884594 + B1_Mur2 SINE Alu 4 142 -7 3 1337 234 270 0 0 chr15 98610382 98610456 -4884518 + (ATG)n Simple_repeat Simple_repeat 3 76 0 3 1337 315 0 0 0 chr15 98611497 98611532 -4883442 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 1337 497 292 163 6 chr15 98611740 98611912 -4883062 + B3 SINE B2 18 216 0 3 1337 26 0 0 0 chr15 98611914 98611940 -4883034 + AT_rich Low_complexity Low_complexity 1 26 0 3 1337 446 271 15 75 chr15 98611960 98612114 -4882860 + B1_Mur1 SINE Alu 4 147 -2 3 1337 298 341 81 33 chr15 98612131 98612405 -4882569 - L2a LINE L2 -337 3089 2803 3 1337 547 205 9 9 chr15 98612439 98612552 -4882422 - B3A SINE B2 -84 114 2 3 1337 288 0 0 0 chr15 98612733 98612765 -4882209 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1337 269 348 21 43 chr15 98612815 98612956 -4882018 - L2a LINE L2 -865 2554 2417 3 1337 1113 166 74 20 chr15 98612994 98613197 -4881777 + B3 SINE B2 2 215 -1 3 1337 803 152 7 0 chr15 98613279 98613424 -4881550 + CT-rich Low_complexity Low_complexity 2 147 0 3 1337 405 328 86 65 chr15 98613438 98613624 -4881350 - ID_B1 SINE B4 -2 222 33 3 1337 249 108 0 0 chr15 98613625 98613662 -4881312 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1337 251 286 12 38 chr15 98613667 98613747 -4881227 - B4A SINE B4 -2 290 213 3 1337 23 33 0 0 chr15 98613755 98613785 -4881189 + AT_rich Low_complexity Low_complexity 1 30 0 3 1337 1961 87 29 181 chr15 98613933 98613996 -4880978 - ORR1A3 LTR MaLR -1 325 279 3 1337 1282 34 0 0 chr15 98613996 98614143 -4880831 - B1_Mm SINE Alu 0 147 1 3 1337 1961 87 29 181 chr15 98614143 98614172 -4880802 - ORR1A3 LTR MaLR -48 278 270 3 1337 1747 16 0 0 chr15 98614172 98614364 -4880610 - B2_Mm1a SINE B2 0 193 2 3 1337 1525 59 0 5 chr15 98614373 98614561 -4880413 - B2_Mm2 SINE B2 -7 188 2 3 1337 1961 87 29 181 chr15 98614561 98614838 -4880136 - ORR1A3 LTR MaLR -57 269 3 3 1337 351 0 0 0 chr15 98615067 98615106 -4879868 + (TAAAA)n Simple_repeat Simple_repeat 4 42 0 3 1337 983 163 197 0 chr15 98615114 98615292 -4879682 + B3 SINE B2 4 216 0 3 1337 468 0 0 0 chr15 98615514 98615566 -4879408 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 1337 186 118 0 0 chr15 98615566 98615600 -4879374 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1337 1220 59 75 17 chr15 98615623 98615796 -4879178 + B2_Mm2 SINE B2 2 184 -11 3 1337 417 320 16 0 chr15 98616145 98616267 -4878707 + ID_B1 SINE B4 95 218 -6 3 1337 625 210 208 11 chr15 98616294 98616472 -4878502 + B3 SINE B2 3 215 -1 3 1337 652 126 160 0 chr15 98616480 98616599 -4878375 + B1_Mm SINE Alu 9 146 -1 3 1337 348 146 0 146 chr15 98616661 98616757 -4878217 - B1F SINE Alu 0 149 68 3 1337 269 119 0 157 chr15 98616759 98616829 -4878145 - B1F SINE Alu -23 126 68 3 1337 233 153 0 157 chr15 98616795 98616865 -4878109 - B1F1 SINE Alu -23 126 68 3 1337 502 228 8 61 chr15 98616867 98616998 -4877976 - B1F2 SINE Alu -23 126 3 3 1337 269 182 0 18 chr15 98617015 98617071 -4877903 - B1F SINE Alu -88 61 7 3 1337 263 256 89 13 chr15 98617071 98617090 -4877884 - ID_B1 SINE B4 -78 142 62 3 1337 246 256 0 0 chr15 98617195 98617273 -4877701 + (TG)n Simple_repeat Simple_repeat 1 78 0 3 1337 428 316 0 75 chr15 98617277 98617424 -4877550 - RSINE1 SINE B4 0 165 30 3 1337 207 88 0 0 chr15 98617426 98617460 -4877514 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 3 1337 1177 55 7 0 chr15 98617460 98617606 -4877368 - B1_Mus2 SINE Alu 0 147 1 3 1337 250 24 0 67 chr15 98617663 98617708 -4877266 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 3 1337 599 230 10 25 chr15 98617724 98617910 -4877064 - B3A SINE B2 -12 183 7 3 1337 418 254 125 15 chr15 98617950 98618086 -4876888 - RSINE1 SINE B4 0 165 15 3 1337 774 161 16 14 chr15 98618071 98618219 -4876755 - B1_Mur4 SINE Alu -2 148 1 3 1337 341 231 70 61 chr15 98618218 98618333 -4876641 - PB1D10 SINE Alu -1 116 1 3 1337 620 199 51 14 chr15 98618333 98618390 -4876584 - ID SINE ID -139 85 24 3 1337 541 263 20 87 chr15 98618790 98618825 -4876149 - B2_Mm2 SINE B2 -5 190 162 3 1337 423 0 0 0 chr15 98618825 98618872 -4876102 + (TATG)n Simple_repeat Simple_repeat 2 48 0 3 1337 782 216 25 1 chr15 98618872 98619032 -4875942 - B3 SINE B2 -47 169 8 3 1337 354 23 0 0 chr15 98619427 98619470 -4875504 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1337 252 0 0 0 chr15 98621026 98621054 -4873920 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1337 1319 102 11 16 chr15 98624830 98625019 -4869955 + B2_Mm2 SINE B2 2 189 -6 3 1337 215 194 0 0 chr15 98625532 98625568 -4869406 + G-rich Low_complexity Low_complexity 1 36 0 3 1337 271 283 31 77 chr15 98625818 98625948 -4869026 + RMER12 LTR ERVK 733 856 -466 3 1337 285 146 0 0 chr15 98625960 98626008 -4868966 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1337 405 0 0 0 chr15 98626682 98626727 -4868247 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1337 1176 8 0 0 chr15 98627891 98628024 -4866950 + (GGGAA)n Simple_repeat Simple_repeat 1 133 0 3 1337 647 146 14 14 chr15 98629538 98629684 -4865290 + (TG)n Simple_repeat Simple_repeat 2 147 0 3 1337 509 348 37 19 chr15 98630157 98630371 -4864603 - ID_B1 SINE B4 -6 218 1 3 1337 586 244 7 7 chr15 98630511 98630647 -4864327 + B1_Mur1 SINE Alu 2 137 -12 3 1337 362 333 0 0 chr15 98630834 98630945 -4864029 - PB1 SINE Alu -11 116 6 3 1337 749 233 19 6 chr15 98631284 98631603 -4863371 + (TGGA)n Simple_repeat Simple_repeat 1 323 0 3 1337 353 291 0 0 chr15 98631824 98631910 -4863064 - U6 snRNA snRNA -1 106 21 3 1337 988 65 14 0 chr15 98632127 98632266 -4862708 - B1_Mus1 SINE Alu 0 148 8 3 1337 277 304 0 48 chr15 98632866 98632949 -4862025 - ID4_ SINE ID -3 80 2 3 1337 408 275 127 22 chr15 98632967 98633101 -4861873 - B1F2 SINE Alu 0 149 1 3 1337 285 131 0 0 chr15 98633107 98633168 -4861806 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 3 1337 550 207 34 25 chr15 98633168 98633287 -4861687 - B1_Mur1 SINE Alu -20 129 10 3 1337 212 294 0 0 chr15 98633450 98633501 -4861473 + L2b LINE L2 3309 3359 -16 4 1337 1146 176 0 10 chr15 98634226 98634432 -4860542 - MIRb SINE MIR -15 253 50 4 1337 224 122 0 24 chr15 98634434 98634476 -4860498 + (GAA)n Simple_repeat Simple_repeat 2 42 0 4 1337 206 378 10 39 chr15 98635173 98635275 -4859699 - MIR SINE MIR -63 145 47 4 1337 24 32 0 0 chr15 98636034 98636065 -4858909 + GC_rich Low_complexity Low_complexity 1 31 0 4 1337 21 0 0 0 chr15 98637530 98637551 -4857423 + GC_rich Low_complexity Low_complexity 1 21 0 4 1337 223 273 0 29 chr15 98638363 98638431 -4856543 + (CGTG)n Simple_repeat Simple_repeat 3 68 0 4 1337 1408 80 32 0 chr15 98640767 98640955 -4854019 - B2_Mm2 SINE B2 0 195 2 4 1337 22 0 0 0 chr15 98640965 98640987 -4853987 + AT_rich Low_complexity Low_complexity 1 22 0 4 1337 618 176 8 32 chr15 98640987 98641110 -4853864 - PB1D9 SINE Alu 0 120 1 4 1337 431 216 102 88 chr15 98641118 98641265 -4853709 - B1_Mur2 SINE Alu 0 149 1 4 1337 516 292 212 22 chr15 98641484 98641715 -4853259 + B4 SINE B4 1 275 -17 4 1337 438 282 159 6 chr15 98641724 98641906 -4853068 + B3 SINE B2 6 215 -1 4 1337 483 285 80 43 chr15 98641918 98642093 -4852881 + B3A SINE B2 5 187 -11 4 1337 1138 88 0 0 chr15 98642093 98642240 -4852734 + B1_Mus1 SINE Alu 2 148 0 4 1337 483 285 80 43 chr15 98642240 98642251 -4852723 + B3A SINE B2 188 198 0 4 1337 708 197 44 0 chr15 98642279 98642416 -4852558 + B1_Mur1 SINE Alu 2 144 -5 4 1337 773 174 71 14 chr15 98642422 98642562 -4852412 + B1_Mus1 SINE Alu 1 148 0 4 1337 255 61 0 0 chr15 98642649 98642682 -4852292 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1337 180 0 0 0 chr15 98642699 98642719 -4852255 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1337 416 248 0 10 chr15 98642753 98642858 -4852116 + PB1D7 SINE Alu 15 115 -5 4 1337 1226 42 0 0 chr15 98642865 98643009 -4851965 + B1_Mus2 SINE Alu 1 144 -3 4 1337 283 347 57 16 chr15 98645168 98645291 -4849683 + ID_B1 SINE B4 84 211 -13 4 1337 236 318 92 64 chr15 98645291 98645308 -4849666 + B1F SINE Alu 3 146 -3 4 1337 183 204 0 0 chr15 98646521 98646570 -4848404 + T-rich Low_complexity Low_complexity 1 49 0 4 1337 1093 72 65 0 chr15 98646616 98646755 -4848219 + B1_Mus1 SINE Alu 1 148 0 4 1337 1272 48 0 6 chr15 98646774 98646943 -4848031 - B2_Mm2 SINE B2 -26 169 2 4 1337 642 204 225 11 chr15 98647219 98647397 -4847577 - B3 SINE B2 0 216 1 4 1337 484 271 75 0 chr15 98647397 98647504 -4847470 - PB1D10 SINE Alu -1 116 2 4 1337 647 160 40 40 chr15 98647643 98647767 -4847207 - B1_Mur2 SINE Alu -6 143 20 4 1337 1505 54 22 5 chr15 98647777 98647962 -4847012 - B2_Mm1t SINE B2 -5 188 1 4 1337 1074 82 136 28 chr15 98648025 98648201 -4846773 + B2_Mm2 SINE B2 1 195 0 4 1337 456 281 0 64 chr15 98648322 98648342 -4846632 + ID_B1 SINE B4 69 214 -10 4 1337 810 158 0 22 chr15 98648342 98648478 -4846496 + B1_Mus1 SINE Alu 6 138 -10 4 1337 273 243 95 0 chr15 98648522 98648596 -4846378 - ID4_ SINE ID -1 82 2 4 1337 280 310 0 45 chr15 98648608 98648696 -4846278 - B1F SINE Alu -65 84 1 4 1337 207 0 0 0 chr15 98648827 98648850 -4846124 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1337 1148 65 0 0 chr15 98648856 98648994 -4845980 - B1_Mm SINE Alu -8 139 2 4 1337 613 186 9 0 chr15 98649016 98649129 -4845845 - B3 SINE B2 0 216 103 4 1337 340 224 120 20 chr15 98649145 98649245 -4845729 - PB1D10 SINE Alu -5 112 3 4 1337 851 230 22 11 chr15 98649488 98649668 -4845306 + B3A SINE B2 1 182 -16 4 1337 669 122 0 0 chr15 98649767 98649882 -4845092 + (CA)n Simple_repeat Simple_repeat 2 116 0 4 1337 346 299 91 35 chr15 98650011 98650243 -4844731 - HAL1 LINE L1 -671 1836 1592 4 1337 765 178 7 0 chr15 98650392 98650527 -4844447 - B1_Mur3 SINE Alu -2 147 12 4 1337 293 0 0 26 chr15 98650603 98650641 -4844333 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 1337 1210 39 0 0 chr15 98650645 98650798 -4844176 - B2_Mm2 SINE B2 -42 153 1 4 1337 240 342 38 51 chr15 98650994 98651151 -4843823 + B4A SINE B4 134 288 -4 4 1337 345 258 57 32 chr15 98651571 98651695 -4843279 - HAL1 LINE L1 -2271 236 110 4 1337 235 296 5 124 chr15 98651781 98651966 -4843008 - RSINE1 SINE B4 0 165 3 4 1337 761 238 47 52 chr15 98651970 98652183 -4842791 - B3 SINE B2 -4 212 1 4 1337 250 273 69 15 chr15 98652362 98652492 -4842482 + MER102b DNA MER1_type 38 174 -167 4 1337 442 173 40 107 chr15 98652755 98652770 -4842204 - B1_Mus2 SINE Alu -1 146 132 4 1337 1777 192 64 47 chr15 98652770 98653131 -4841843 + ORR1B2 LTR MaLR 1 367 0 4 1337 442 173 40 107 chr15 98653131 98653264 -4841710 - B1_Mus2 SINE Alu -16 131 8 4 1337 285 224 0 0 chr15 98653217 98653275 -4841699 - B4 SINE B4 -153 139 82 4 1337 286 340 134 80 chr15 98653444 98653668 -4841306 - B4A SINE B4 -2 290 55 4 1337 939 248 5 5 chr15 98653710 98653913 -4841061 + B3 SINE B2 11 213 -3 4 1337 1105 130 43 16 chr15 98653942 98654130 -4840844 + B2_Mm2 SINE B2 3 195 0 4 1337 226 321 45 97 chr15 98654159 98654314 -4840660 - RLTR12B LTR ERVK -335 193 47 4 1337 545 118 11 11 chr15 98654339 98654433 -4840541 + B1_Mur4 SINE Alu 57 150 0 4 1337 920 212 42 42 chr15 98654603 98654795 -4840179 + B3 SINE B2 1 192 -24 4 1337 331 217 14 0 chr15 98654827 98654896 -4840078 + ID SINE ID 3 72 -152 4 1337 1576 181 127 19 chr15 98654904 98655275 -4839699 - MTC LTR MaLR -9 412 2 4 1337 905 185 25 55 chr15 98655616 98655816 -4839158 - B2_Mm2 SINE B2 -1 194 1 4 1337 291 264 13 53 chr15 98655921 98655997 -4838977 - ID4_ SINE ID -4 79 7 4 1337 293 233 52 26 chr15 98656229 98656325 -4838649 + PB1 SINE Alu 34 120 -7 4 1337 186 43 0 0 chr15 98656343 98656366 -4838608 + (GGGA)n Simple_repeat Simple_repeat 2 24 0 4 1337 452 202 50 10 chr15 98656479 98656579 -4838395 + ID_B1 SINE B4 111 214 -10 4 1337 1012 51 29 0 chr15 98656705 98656843 -4838131 + B1_Mm SINE Alu 6 147 0 4 1337 378 268 121 8 chr15 98657075 98657199 -4837775 + B1_Mur1 SINE Alu 12 149 0 4 1337 307 237 51 45 chr15 98657274 98657394 -4837580 + B1_Mm SINE Alu 5 122 -27 4 1337 266 211 0 17 chr15 98658353 98658411 -4836563 - MTE2a LTR MaLR -1 369 313 4 1337 637 33 22 22 chr15 98658411 98658503 -4836471 + B1_Mus1 SINE Alu 4 95 -53 4 1337 274 260 26 80 chr15 98658450 98658563 -4836411 + RLTR25B LTR ERVK 441 547 -481 4 1337 485 317 66 145 chr15 98658542 98658845 -4836129 - MTE2a LTR MaLR -82 297 19 4 1337 568 236 35 7 chr15 98658949 98659090 -4835884 + ID_B1 SINE B4 78 222 -2 4 1337 1073 63 7 34 chr15 98659445 98659592 -4835382 - B1_Mus2 SINE Alu 0 147 5 4 1337 262 299 13 13 chr15 98659987 98660065 -4834909 + B4 SINE B4 3 80 -212 4 1337 221 150 0 0 chr15 98660139 98660179 -4834795 + (TC)n Simple_repeat Simple_repeat 2 41 0 4 1337 315 0 0 0 chr15 98660401 98660436 -4834538 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 1337 845 31 7 92 chr15 98660574 98660715 -4834259 + B1_Mus1 SINE Alu 20 148 0 4 1337 207 0 0 0 chr15 98661686 98661709 -4833265 + (CGGG)n Simple_repeat Simple_repeat 3 25 0 4 1337 411 119 0 0 chr15 98662909 98662976 -4831998 + (A)n Simple_repeat Simple_repeat 1 67 0 4 1337 204 40 0 0 chr15 98664122 98664147 -4830827 + (TTG)n Simple_repeat Simple_repeat 3 27 0 4 1337 216 259 0 0 chr15 98664393 98664447 -4830527 + GA-rich Low_complexity Low_complexity 2 55 0 4 1337 274 274 53 97 chr15 98666511 98666624 -4828350 - Charlie15a DNA MER1_type 0 224 117 4 1337 947 178 44 25 chr15 98666879 98667099 -4827875 + MIRc SINE MIR 18 255 -13 4 1337 333 193 33 98 chr15 98668332 98668424 -4826550 + MT2B LTR ERVL 172 257 -344 4 1337 746 132 8 24 chr15 98668347 98668471 -4826503 + B1_Mus1 SINE Alu 27 148 0 4 1337 280 275 23 20 chr15 98668510 98668625 -4826349 + ID4_ SINE ID 2 114 -38 4 1337 704 201 72 0 chr15 98668679 98668818 -4826156 + B1_Mur3 SINE Alu 1 149 0 4 1337 551 204 0 10 chr15 98668830 98668934 -4826040 + B3 SINE B2 3 105 -111 4 1337 22 0 0 0 chr15 98668966 98668988 -4825986 + AT_rich Low_complexity Low_complexity 1 22 0 4 1337 660 124 213 8 chr15 98668988 98669110 -4825864 + B1_Mus1 SINE Alu 1 147 -1 4 1337 599 217 7 0 chr15 98669124 98669276 -4825698 + (CA)n Simple_repeat Simple_repeat 1 153 0 4 1337 490 246 100 0 chr15 98669359 98669489 -4825485 - ID_B1 SINE B4 0 224 82 4 1337 639 39 0 0 chr15 98675562 98675640 -4819334 + (CTG)n Simple_repeat Simple_repeat 3 80 0 4 1337 819 178 0 0 chr15 98675678 98675969 -4819005 + (CTG)n Simple_repeat Simple_repeat 1 291 0 4 1337 507 107 0 0 chr15 98676059 98676134 -4818840 + (CTG)n Simple_repeat Simple_repeat 1 75 0 4 1337 222 37 0 0 chr15 98676258 98676285 -4818689 + (CTG)n Simple_repeat Simple_repeat 3 29 0 4 1337 282 143 0 0 chr15 98676468 98676517 -4818457 + (TTG)n Simple_repeat Simple_repeat 2 50 0 4 1337 420 20 0 0 chr15 98676876 98676925 -4818049 + (CTG)n Simple_repeat Simple_repeat 2 50 0 4 1337 186 317 60 24 chr15 98678152 98678236 -4816738 + MIRc SINE MIR 120 206 -62 4 1337 753 55 264 0 chr15 98678418 98678528 -4816446 + B1_Mus1 SINE Alu 2 140 -8 4 1337 198 91 0 0 chr15 98678528 98678561 -4816413 + (CAA)n Simple_repeat Simple_repeat 2 34 0 4 1337 424 269 37 9 chr15 98678567 98678676 -4816298 + PB1D10 SINE Alu 5 116 -1 4 1337 387 328 26 0 chr15 98678688 98678804 -4816170 + ID_B1 SINE B4 81 199 -25 5 1337 663 229 50 0 chr15 98678915 98679055 -4815919 - B1_Mur2 SINE Alu -1 148 2 5 1337 282 336 123 7 chr15 98679163 98679301 -4815673 + MIR SINE MIR 77 230 -32 5 1337 450 0 0 0 chr15 98680018 98680068 -4814906 + (CTG)n Simple_repeat Simple_repeat 1 50 0 5 1337 938 118 0 7 chr15 98681415 98681568 -4813406 + (CTG)n Simple_repeat Simple_repeat 1 152 0 5 1337 223 303 11 0 chr15 98687646 98687728 -4807246 + MIR SINE MIR 4 81 -195 5 1337 700 165 113 0 chr15 98689126 98689259 -4805715 - B1_Mur1 SINE Alu 0 149 2 5 1337 916 41 0 261 chr15 98689455 98689654 -4805320 + B1_Mus2 SINE Alu 1 147 0 5 1337 448 294 119 0 chr15 98689699 98689825 -4805149 + RSINE1 SINE B4 9 149 -16 5 1337 226 174 22 0 chr15 98690082 98690128 -4804846 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 5 1337 843 298 45 0 chr15 98690161 98690403 -4804571 - B4A SINE B4 -38 254 2 5 1337 405 286 0 0 chr15 98690833 98690980 -4803994 + (CA)n Simple_repeat Simple_repeat 1 147 0 5 1337 228 277 10 29 chr15 98692751 98692855 -4802119 + GA-rich Low_complexity Low_complexity 1 102 0 5 1338 487 294 14 7 chr15 98698251 98698398 -4796576 + B1F2 SINE Alu 2 149 0 5 1338 336 111 0 0 chr15 98699316 98699370 -4795604 + (TC)n Simple_repeat Simple_repeat 2 55 0 5 1338 207 69 0 0 chr15 98701614 98701643 -4793331 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1338 29 47 0 0 chr15 98701800 98701843 -4793131 + GC_rich Low_complexity Low_complexity 1 43 0 5 1338 198 0 0 0 chr15 98701901 98701923 -4793051 + (CCGCG)n Simple_repeat Simple_repeat 5 26 0 5 1338 31 0 0 0 chr15 98701973 98702004 -4792970 + GC_rich Low_complexity Low_complexity 1 31 0 5 1338 194 316 147 17 chr15 98703403 98703519 -4791455 - MIRb SINE MIR -46 222 92 5 1338 442 282 46 0 chr15 98703630 98703761 -4791213 + RSINE1 SINE B4 28 164 -1 5 1338 233 212 0 83 chr15 98703899 98703971 -4791003 + Charlie5 DNA MER1_type 19 84 -2540 5 1338 236 245 71 50 chr15 98704349 98704448 -4790526 + MurSatRep1 Unknown Unknown 195 295 -1842 5 1338 626 277 30 30 chr15 98704482 98704683 -4790291 - B3 SINE B2 0 216 16 5 1338 407 228 219 0 chr15 98704798 98704912 -4790062 + RSINE1 SINE B4 8 146 -19 5 1338 387 0 0 0 chr15 98704917 98704960 -4790014 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1338 1117 88 7 0 chr15 98705008 98705155 -4789819 + B1_Mus1 SINE Alu 1 148 0 5 1338 217 0 61 0 chr15 98705157 98705190 -4789784 + (GAA)n Simple_repeat Simple_repeat 2 36 0 5 1338 769 249 13 82 chr15 98705240 98705472 -4789502 + B3 SINE B2 1 216 0 5 1338 914 121 0 7 chr15 98705481 98705623 -4789351 - B1_Mus2 SINE Alu 0 147 7 5 1338 682 191 45 8 chr15 98705644 98705776 -4789198 + B3 SINE B2 3 139 -77 5 1338 1224 74 114 6 chr15 98705787 98705963 -4789011 - B2_Mm2 SINE B2 0 195 1 5 1338 249 254 28 0 chr15 98706026 98706097 -4788877 + B3 SINE B2 135 207 -9 5 1338 1308 129 0 15 chr15 98706107 98706304 -4788670 + B2_Mm2 SINE B2 1 194 -1 5 1338 796 199 0 7 chr15 98706320 98706462 -4788512 + B1_Mus1 SINE Alu 6 146 -2 5 1338 1611 32 21 0 chr15 98706479 98706668 -4788306 + B2_Mm1a SINE B2 1 193 0 5 1338 553 301 56 7 chr15 98706693 98706837 -4788137 + RSINE1 SINE B4 8 158 -7 5 1338 224 167 24 0 chr15 98706918 98706960 -4788014 - B1F1 SINE Alu -91 58 16 5 1338 695 303 43 0 chr15 98707186 98707371 -4787603 + B3A SINE B2 2 194 -4 5 1338 1155 62 14 0 chr15 98707373 98707519 -4787455 + B1_Mus1 SINE Alu 1 148 0 5 1338 245 65 7 0 chr15 98707704 98707746 -4787228 + B1_Mus2 SINE Alu 88 131 -18 5 1338 347 275 51 68 chr15 98709211 98709328 -4785646 + PB1D10 SINE Alu 1 115 -2 5 1338 506 200 37 28 chr15 98710413 98710521 -4784453 - URR1A DNA MER1_type -43 183 75 5 1338 892 160 28 0 chr15 98710752 98710896 -4784078 + B1_Mur4 SINE Alu 2 149 -1 5 1338 688 208 14 20 chr15 98712169 98712316 -4782658 - B1_Mur1 SINE Alu -3 146 1 5 1338 268 219 59 118 chr15 98712334 98712453 -4782521 + MT2B LTR ERVL 153 264 -337 5 1338 674 187 0 0 chr15 98712353 98712476 -4782498 + B1_Mus2 SINE Alu 13 135 -12 5 1338 285 191 12 150 chr15 98712609 98712689 -4782285 + PB1D10 SINE Alu 44 112 -5 5 1338 382 274 96 64 chr15 98712708 98712833 -4782141 + ID_B1 SINE B4 96 224 0 5 1338 228 135 0 0 chr15 98712980 98713017 -4781957 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1338 1050 44 80 7 chr15 98713163 98713300 -4781674 - B1_Mus2 SINE Alu 0 147 1 5 1338 400 225 42 75 chr15 98713579 98713699 -4781275 + MT2B LTR ERVL 142 257 -344 5 1338 809 169 0 0 chr15 98713601 98713737 -4781237 + B1_Mus1 SINE Alu 6 141 -7 5 1338 219 69 0 0 chr15 98713737 98713766 -4781208 + (TAA)n Simple_repeat Simple_repeat 2 30 0 5 1338 551 172 130 8 chr15 98713851 98713974 -4781000 - B1_Mur2 SINE Alu 0 149 12 5 1338 323 288 82 22 chr15 98713856 98713991 -4780983 - B4 SINE B4 -71 221 79 5 1338 393 232 43 35 chr15 98714000 98714116 -4780858 - B1_Mur1 SINE Alu -1 148 32 5 1338 249 33 0 0 chr15 98714282 98714312 -4780662 + (TCTCTG)n Simple_repeat Simple_repeat 1 30 0 5 1338 297 229 66 0 chr15 98714628 98714689 -4780285 - B3 SINE B2 -96 120 56 5 1338 1748 16 0 0 chr15 98714866 98715059 -4779915 - B2_Mm1a SINE B2 0 193 1 5 1338 283 307 91 0 chr15 98715288 98715376 -4779598 - B1F SINE Alu -52 97 2 5 1338 26 0 0 0 chr15 98715384 98715410 -4779564 + AT_rich Low_complexity Low_complexity 1 26 0 5 1338 1209 55 0 0 chr15 98715430 98715575 -4779399 + B1_Mm SINE Alu 1 145 -2 5 1338 765 0 0 0 chr15 98715575 98715660 -4779314 + (GAA)n Simple_repeat Simple_repeat 2 86 0 5 1338 495 0 0 0 chr15 98715660 98715715 -4779259 + (CGA)n Simple_repeat Simple_repeat 1 55 0 5 1338 1098 61 7 0 chr15 98715758 98715906 -4779068 - B2_Mm2 SINE B2 -46 149 1 5 1338 266 152 203 0 chr15 98715910 98715969 -4779005 - B1_Mur4 SINE Alu -62 88 18 5 1338 566 274 93 21 chr15 98716040 98716234 -4778740 + B3 SINE B2 9 216 0 5 1338 787 207 0 14 chr15 98716243 98716390 -4778584 + B1_Mur2 SINE Alu 5 149 0 5 1338 306 0 0 0 chr15 98716404 98716438 -4778536 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1338 270 0 0 0 chr15 98716438 98716467 -4778507 + (GA)n Simple_repeat Simple_repeat 1 30 0 5 1338 514 109 0 21 chr15 98716565 98716659 -4778315 + (TA)n Simple_repeat Simple_repeat 1 92 0 5 1338 279 0 0 0 chr15 98716666 98716697 -4778277 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1338 907 239 5 0 chr15 98716802 98717007 -4777967 + B3 SINE B2 10 215 -1 5 1338 1361 97 0 11 chr15 98717015 98717202 -4777772 + B2_Mm2 SINE B2 1 185 -10 5 1338 504 250 78 0 chr15 98717857 98717985 -4776989 + B1F SINE Alu 9 146 -3 5 1338 233 339 80 32 chr15 98717999 98718124 -4776850 - MLT1A LTR MaLR -53 321 191 5 1338 779 277 14 23 chr15 98718142 98718360 -4776614 + B3 SINE B2 1 216 0 5 1338 1656 21 0 20 chr15 98718394 98718590 -4776384 + B2_Mm1a SINE B2 1 192 -1 5 1338 396 216 59 67 chr15 98718686 98718697 -4776277 - PB1D7 SINE Alu 0 120 112 5 1338 189 0 0 0 chr15 98718697 98718718 -4776256 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5 1338 396 216 59 67 chr15 98718718 98718825 -4776149 - PB1D7 SINE Alu -9 111 3 5 1338 358 200 59 69 chr15 98718827 98718929 -4776045 - B1_Mur1 SINE Alu 0 149 49 5 1338 416 283 31 8 chr15 98718960 98719088 -4775886 - B1F SINE Alu -9 140 10 5 1338 313 261 0 0 chr15 98719167 98719236 -4775738 - ID4 SINE ID -6 77 9 5 1338 212 88 0 0 chr15 98719387 98719421 -4775553 + B3 SINE B2 1 34 -182 5 1338 228 308 77 0 chr15 98719430 98719521 -4775453 + MIR SINE MIR 154 251 -11 5 1338 786 220 120 6 chr15 98719558 98719741 -4775233 - B3 SINE B2 -10 206 3 5 1338 4379 32 0 0 chr15 98719975 98720468 -4774506 + MT2_Mm LTR ERVL 1 493 0 5 1338 1491 57 5 59 chr15 98720749 98720953 -4774021 - B2_Mm1a SINE B2 0 193 1 5 1338 541 286 7 7 chr15 98721012 98721153 -4773821 - B1_Mur3 SINE Alu -7 142 2 5 1338 22 35 0 0 chr15 98721211 98721240 -4773734 + AT_rich Low_complexity Low_complexity 1 29 0 5 1338 1046 88 0 0 chr15 98721298 98721435 -4773539 - B1_Mus1 SINE Alu -7 141 5 5 1338 213 94 0 0 chr15 98721530 98721562 -4773412 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 5 1338 282 208 0 40 chr15 98721602 98721677 -4773297 - PB1D10 SINE Alu -5 112 41 5 1338 244 333 13 13 chr15 98722139 98722218 -4772756 - ID4_ SINE ID -2 81 3 5 1338 291 28 0 0 chr15 98723297 98723333 -4771641 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1338 343 253 0 98 chr15 98723346 98723438 -4771536 - PB1D10 SINE Alu -20 97 15 5 1338 234 0 0 0 chr15 98725976 98726002 -4768972 + (TTCC)n Simple_repeat Simple_repeat 4 29 0 5 1338 387 245 153 0 chr15 98727072 98727170 -4767804 + B1_Mur1 SINE Alu 13 125 -24 5 1338 286 248 171 18 chr15 98727170 98727183 -4767791 + ID_B1 SINE B4 94 221 -3 5 1338 497 58 14 0 chr15 98727194 98727263 -4767711 + (GA)n Simple_repeat Simple_repeat 2 71 0 5 1338 243 0 0 0 chr15 98727348 98727375 -4767599 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 1338 361 306 27 9 chr15 98727406 98727545 -4767429 + MIR SINE MIR 10 149 -119 6 1338 21 0 0 0 chr15 98729006 98729027 -4765947 + GC_rich Low_complexity Low_complexity 1 21 0 6 1338 254 50 0 24 chr15 98729499 98729540 -4765434 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 6 1338 504 256 31 25 chr15 98729545 98729705 -4765269 - RSINE1 SINE B4 -2 163 3 6 1338 456 314 35 29 chr15 98729766 98729940 -4765034 - ID_B1 SINE B4 0 224 50 6 1338 811 197 72 57 chr15 98729944 98730138 -4764836 + B3 SINE B2 15 211 -5 6 1338 1135 41 0 20 chr15 98730141 98730291 -4764683 + B1_Mus2 SINE Alu 1 147 0 6 1338 189 0 0 0 chr15 98730294 98730315 -4764659 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 6 1338 250 344 25 0 chr15 98730315 98730437 -4764537 + B4 SINE B4 70 194 -98 6 1338 597 172 39 41 chr15 98730338 98730480 -4764494 + B1_Mur4 SINE Alu 9 150 0 6 1338 213 193 35 0 chr15 98730481 98730538 -4764436 + A-rich Low_complexity Low_complexity 2 60 0 6 1338 1021 224 149 77 chr15 98730890 98730994 -4763980 - MTD LTR MaLR -30 389 293 6 1338 873 225 0 66 chr15 98730994 98731222 -4763752 + B3 SINE B2 1 213 -3 6 1338 1021 224 149 77 chr15 98731222 98731480 -4763494 - MTD LTR MaLR -127 292 1 6 1338 735 191 119 31 chr15 98731509 98731703 -4763271 + B3 SINE B2 6 216 0 6 1338 349 333 101 19 chr15 98731744 98731903 -4763071 + B3 SINE B2 3 174 -42 6 1338 708 270 28 29 chr15 98731912 98732130 -4762844 + B3 SINE B2 6 216 0 6 1338 977 40 0 0 chr15 98732182 98732307 -4762667 - B2_Mm2 SINE B2 -70 125 1 6 1338 26 0 0 0 chr15 98732320 98732346 -4762628 + AT_rich Low_complexity Low_complexity 1 26 0 6 1338 1007 44 73 0 chr15 98732346 98732482 -4762492 - B1_Mus2 SINE Alu 0 147 2 6 1338 687 190 34 40 chr15 98732486 98732634 -4762340 - B1_Mur2 SINE Alu -1 148 2 6 1338 541 181 55 89 chr15 98732646 98732792 -4762182 + B1_Mur1 SINE Alu 7 147 -2 6 1338 489 255 75 44 chr15 98732789 98732949 -4762025 + RSINE1 SINE B4 1 165 0 6 1338 275 226 95 114 chr15 98733519 98733624 -4761350 + MT2B LTR ERVL 155 257 -344 6 1338 539 200 66 16 chr15 98733540 98733662 -4761312 + B1_Mur3 SINE Alu 21 148 -1 6 1338 452 252 52 30 chr15 98734052 98734187 -4760787 - B1_Mur1 SINE Alu -10 139 2 6 1338 457 210 74 25 chr15 98736036 98736158 -4758816 + RSINE1 SINE B4 3 130 -35 6 1338 248 246 59 110 chr15 98736367 98736467 -4758507 + MT2B LTR ERVL 62 250 -334 6 1338 490 131 25 14 chr15 98736467 98736567 -4758407 + PB1D9 SINE Alu 9 109 -11 6 1338 267 133 0 0 chr15 98736582 98736627 -4758347 + (CAA)n Simple_repeat Simple_repeat 1 45 0 6 1338 239 301 40 40 chr15 98736849 98736925 -4758049 - B4A SINE B4 -1 291 216 6 1338 317 206 85 93 chr15 98736929 98737047 -4757927 - RSINE1 SINE B4 -2 163 47 6 1338 25 0 0 0 chr15 98737055 98737080 -4757894 + AT_rich Low_complexity Low_complexity 1 25 0 6 1338 1610 36 0 0 chr15 98737081 98737273 -4757701 - B2_Mm1a SINE B2 -1 192 1 6 1338 516 142 179 0 chr15 98737328 98737434 -4757540 + B3 SINE B2 2 126 -90 6 1338 616 261 18 18 chr15 98737511 98737675 -4757299 - B3A SINE B2 -27 171 8 6 1338 279 0 0 0 chr15 98738124 98738155 -4756819 + (TC)n Simple_repeat Simple_repeat 1 31 0 6 1338 203 0 119 0 chr15 98739591 98739633 -4755341 + (CATA)n Simple_repeat Simple_repeat 3 49 0 6 1338 495 157 35 61 chr15 98740289 98740404 -4754570 - PB1D9 SINE Alu -8 112 1 6 1338 565 222 34 0 chr15 98740618 98740735 -4754239 - B3 SINE B2 -95 121 1 6 1338 331 305 92 8 chr15 98740735 98740854 -4754120 - B1F1 SINE Alu 0 149 21 6 1338 789 207 57 57 chr15 98740882 98741092 -4753882 + B3 SINE B2 1 210 -6 6 1338 1158 50 0 0 chr15 98741111 98741252 -4753722 + B1_Mm SINE Alu 1 141 -6 6 1338 207 0 0 0 chr15 98741255 98741278 -4753696 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1338 1208 92 11 26 chr15 98741298 98741488 -4753486 + B2_Mm1t SINE B2 2 188 -5 6 1338 639 144 144 0 chr15 98741553 98741678 -4753296 + B1_Mur4 SINE Alu 2 144 -6 6 1338 213 326 45 23 chr15 98744668 98744756 -4750218 - MIRb SINE MIR -71 197 108 6 1338 1110 55 7 0 chr15 98744759 98744905 -4750069 + B1_Mus2 SINE Alu 1 147 0 6 1338 634 157 57 24 chr15 98744969 98745093 -4749881 + B1_Mur4 SINE Alu 2 129 -21 6 1338 308 264 110 7 chr15 98745143 98745173 -4749801 + B1_Mus1 SINE Alu 5 144 -1 6 1338 414 223 87 0 chr15 98745173 98745276 -4749698 + ID_B1 SINE B4 111 222 -2 6 1338 759 141 8 0 chr15 98746695 98746823 -4748151 - B1_Mur4 SINE Alu -16 134 6 6 1338 350 312 41 61 chr15 98746720 98746867 -4748107 - B4 SINE B4 -95 197 54 6 1338 195 42 0 0 chr15 98747306 98747330 -4747644 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1338 252 0 0 0 chr15 98747527 98747555 -4747419 + (CACCC)n Simple_repeat Simple_repeat 3 30 0 6 1338 1112 55 0 0 chr15 98749020 98749165 -4745809 - B1_Mus1 SINE Alu 0 148 4 6 1338 288 175 32 0 chr15 98749324 98749387 -4745587 - PB1D10 SINE Alu 0 117 53 6 1338 580 234 42 14 chr15 98749625 98749768 -4745206 + B1_Mur2 SINE Alu 3 149 0 6 1338 445 251 162 51 chr15 98749885 98750082 -4744892 + B4 SINE B4 4 222 -70 6 1338 339 244 51 0 chr15 98750135 98750213 -4744761 + ID4 SINE ID 2 83 0 6 1338 457 284 38 43 chr15 98750219 98750295 -4744679 + MER2 DNA MER2_type 69 147 -198 6 1338 1177 21 21 0 chr15 98750295 98750440 -4744534 - B1_Mus1 SINE Alu 0 148 1 6 1338 457 284 38 43 chr15 98750440 98750547 -4744427 + MER2 DNA MER2_type 148 251 -94 6 1338 517 262 28 0 chr15 98750574 98750715 -4744259 - B1_Mur2 SINE Alu 0 149 5 6 1338 240 59 0 0 chr15 98750761 98750795 -4744179 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 1338 216 0 0 0 chr15 98750795 98750819 -4744155 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1338 539 246 0 8 chr15 98750833 98750952 -4744022 - RSINE1 SINE B4 -20 145 28 6 1338 398 246 87 63 chr15 98751052 98751178 -4743796 + B1F1 SINE Alu 15 143 -6 6 1338 1160 41 7 0 chr15 98751240 98751386 -4743588 + B1_Mus1 SINE Alu 2 148 0 6 1338 219 150 0 0 chr15 98751387 98751427 -4743547 + (A)n Simple_repeat Simple_repeat 1 40 0 6 1338 500 283 123 19 chr15 98751584 98751746 -4743228 + ID_B1 SINE B4 1 179 -45 6 1338 915 143 0 20 chr15 98751748 98751898 -4743076 + B1_Mus1 SINE Alu 2 148 0 6 1338 1624 167 64 15 chr15 98752144 98752473 -4742501 + ORR1D1 LTR MaLR 28 372 -2 6 1338 1147 54 0 13 chr15 98752474 98752623 -4742351 + B1_Mus2 SINE Alu 1 147 0 6 1338 1568 204 187 26 chr15 98752641 98753069 -4741905 + ORR1D1-int LTR MaLR 3 499 -871 6 1338 2212 213 35 12 chr15 98753060 98753575 -4741399 + ORR1D1-int LTR MaLR 846 1533 -47 6 1338 1478 107 99 78 chr15 98753597 98753891 -4741083 + ORR1D1 LTR MaLR 75 374 0 6 1338 641 202 78 0 chr15 98753941 98754070 -4740904 + B1_Mur2 SINE Alu 1 139 -10 6 1338 486 314 0 0 chr15 98754107 98754225 -4740749 + B3A SINE B2 2 119 -79 6 1338 255 125 0 0 chr15 98754230 98754270 -4740704 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1338 31 0 0 0 chr15 98754288 98754319 -4740655 + AT_rich Low_complexity Low_complexity 1 31 0 6 1338 483 82 0 0 chr15 98754486 98754559 -4740415 + (TG)n Simple_repeat Simple_repeat 1 73 0 6 1338 1416 64 21 0 chr15 98754648 98754836 -4740138 - B2_Mm1t SINE B2 0 193 2 6 1338 1120 69 0 0 chr15 98754839 98754984 -4739990 - B1_Mus2 SINE Alu 0 147 3 6 1338 494 128 23 11 chr15 98755010 98755097 -4739877 + B1_Mur3 SINE Alu 62 149 0 6 1338 313 299 99 46 chr15 98755516 98755667 -4739307 - RSINE1 SINE B4 -4 161 3 6 1338 360 188 12 48 chr15 98755966 98756050 -4738924 - ID4 SINE ID -1 82 2 6 1338 364 282 0 83 chr15 98756062 98756154 -4738820 - B1F SINE Alu 0 149 67 6 1338 3516 44 5 2 chr15 98756154 98756589 -4738385 + RLTR10C LTR ERVK 1 436 0 6 1338 364 282 0 83 chr15 98756589 98756616 -4738358 - B1F SINE Alu -83 66 40 6 1338 281 164 4 16 chr15 98756683 98756746 -4738228 - PB1D7 SINE Alu -4 123 66 6 1338 629 222 22 15 chr15 98756802 98756939 -4738035 + B3 SINE B2 2 139 -77 6 1338 316 167 178 14 chr15 98756967 98757040 -4737934 - B1_Mur1 SINE Alu -1 148 64 6 1338 870 122 0 44 chr15 98757097 98757234 -4737740 + B1_Mur4 SINE Alu 1 131 -19 6 1338 276 77 0 0 chr15 98757278 98757317 -4737657 + (A)n Simple_repeat Simple_repeat 1 39 0 6 1338 818 142 14 21 chr15 98757695 98757839 -4737135 + B1_Mus2 SINE Alu 5 147 0 6 1338 237 186 0 0 chr15 98758076 98758119 -4736855 + ID SINE ID 2 44 -180 6 1338 315 0 0 0 chr15 98758120 98758155 -4736819 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 1338 571 180 104 45 chr15 98758227 98758361 -4736613 - B1_Mur4 SINE Alu -7 143 2 6 1338 1199 88 5 54 chr15 98758523 98758568 -4736406 - B2_Mm2 SINE B2 0 195 156 6 1338 198 0 0 0 chr15 98758568 98758590 -4736384 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 6 1338 1199 88 5 54 chr15 98758590 98758748 -4736226 - B2_Mm2 SINE B2 -40 155 2 6 1338 460 111 0 0 chr15 98758857 98758938 -4736036 - L1Md_F2 LINE L1 0 6582 6502 6 1338 180 0 0 0 chr15 98759184 98759204 -4735770 + (GCTTG)n Simple_repeat Simple_repeat 2 21 0 6 1338 195 0 27 54 chr15 98759587 98759624 -4735350 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 6 1338 272 328 0 0 chr15 98759648 98759715 -4735259 + RSINE1 SINE B4 41 107 -58 6 1338 311 200 0 0 chr15 98760000 98760050 -4734924 + B1F SINE Alu 22 71 -78 7 1338 459 141 39 216 chr15 98760067 98760248 -4734726 + B1_Mur3 SINE Alu 1 149 0 7 1338 644 206 14 29 chr15 98760366 98760506 -4734468 - ID_B1 SINE B4 -75 149 12 7 1338 504 223 115 0 chr15 98760530 98760660 -4734314 - B1_Mur1 SINE Alu -3 146 2 7 1338 265 238 79 0 chr15 98760722 98760785 -4734189 - B4 SINE B4 -8 284 217 7 1338 266 270 141 50 chr15 98760802 98760923 -4734051 - B3A SINE B2 -24 174 43 7 1338 283 250 36 36 chr15 98760961 98761044 -4733930 - B4A SINE B4 -72 220 138 7 1338 235 233 67 0 chr15 98761083 98761143 -4733831 - PB1D10 SINE Alu -5 112 49 7 1338 211 62 31 0 chr15 98761152 98761184 -4733790 + B1_Mus1 SINE Alu 22 54 -94 7 1338 41 0 0 0 chr15 98765019 98765060 -4729914 + GC_rich Low_complexity Low_complexity 1 41 0 7 1338 372 276 147 30 chr15 98766015 98766228 -4728746 + B4 SINE B4 28 253 -39 7 1338 420 248 82 44 chr15 98766430 98766565 -4728409 - ID_B1 SINE B4 -3 221 82 7 1338 186 103 0 0 chr15 98766699 98766728 -4728246 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 7 1338 635 216 64 14 chr15 98766734 98766875 -4728099 - B1_Mur2 SINE Alu 0 149 2 7 1338 21 0 0 0 chr15 98766878 98766899 -4728075 + AT_rich Low_complexity Low_complexity 1 21 0 7 1338 425 291 88 15 chr15 98766917 98767053 -4727921 - RSINE1 SINE B4 -12 153 8 7 1338 456 134 0 0 chr15 98767067 98767164 -4727810 + (TA)n Simple_repeat Simple_repeat 1 97 0 7 1338 1136 61 7 0 chr15 98767172 98767319 -4727655 - B1_Mus1 SINE Alu 0 148 1 7 1338 241 282 11 114 chr15 98767319 98767407 -4727567 + MT2B2 LTR ERVL 177 255 -329 7 1338 1236 74 0 0 chr15 98768044 98768558 -4726416 + (CA)n Simple_repeat Simple_repeat 1 514 0 7 1338 572 299 30 43 chr15 98768637 98768871 -4726103 + B4A SINE B4 3 233 -59 7 1338 485 223 145 108 chr15 98768864 98769050 -4725924 + B3A SINE B2 6 198 0 7 1338 1160 48 7 0 chr15 98769074 98769221 -4725753 + B1_Mus1 SINE Alu 1 148 0 7 1338 306 0 0 0 chr15 98769225 98769259 -4725715 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 7 1338 338 302 105 47 chr15 98769269 98769460 -4725514 + B4A SINE B4 83 284 -8 7 1338 791 204 148 23 chr15 98769860 98770273 -4724701 - RLTR40 LTR ERVK -12 805 297 7 1338 378 0 0 0 chr15 98770275 98770317 -4724657 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 1338 538 231 204 0 chr15 98770339 98770525 -4724449 - RLTR40 LTR ERVK -593 224 1 7 1338 345 207 92 75 chr15 98770655 98770775 -4724199 + B1F2 SINE Alu 12 133 -16 7 1338 466 232 39 48 chr15 98770791 98770895 -4724079 - B1_Mur2 SINE Alu -27 122 20 7 1338 21 0 0 0 chr15 98771160 98771181 -4723793 + AT_rich Low_complexity Low_complexity 1 21 0 7 1338 389 296 38 43 chr15 98771282 98771466 -4723508 - MLT1H LTR MaLR -249 300 118 7 1338 269 89 22 0 chr15 98771568 98771613 -4723361 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1338 657 130 36 27 chr15 98771696 98771807 -4723167 - B3 SINE B2 -102 114 3 7 1338 225 94 0 0 chr15 98771836 98771868 -4723106 + (T)n Simple_repeat Simple_repeat 1 32 0 7 1338 973 54 0 0 chr15 98771879 98772009 -4722965 - B1_Mus2 SINE Alu 0 147 18 7 1338 1391 68 16 5 chr15 98772350 98772542 -4722432 - B2_Mm2 SINE B2 0 195 2 7 1338 840 168 0 0 chr15 98772918 98773055 -4721919 - B1_Mur4 SINE Alu -13 137 1 7 1338 203 233 0 0 chr15 98773410 98773453 -4721521 + C-rich Low_complexity Low_complexity 1 43 0 7 1338 3020 92 86 47 chr15 98773587 98773989 -4720985 + RMER2 LTR ERV1 10 435 -132 7 1338 270 0 0 0 chr15 98773989 98774019 -4720955 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 7 1338 3020 92 86 47 chr15 98774019 98774153 -4720821 + RMER2 LTR ERV1 436 566 -1 7 1338 228 135 0 0 chr15 98774377 98774414 -4720560 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1338 549 221 16 24 chr15 98774428 98774551 -4720423 + B3A SINE B2 1 122 -76 7 1338 1613 94 150 0 chr15 98774551 98774818 -4720156 - MT2C_Mm LTR ERVL 0 475 169 7 1338 1178 35 0 0 chr15 98774841 98774982 -4719992 - B1_Mus1 SINE Alu -6 142 2 7 1338 372 253 0 12 chr15 98774988 98775068 -4719906 - B4A SINE B4 -57 235 157 7 1338 601 27 0 0 chr15 98775077 98775151 -4719823 - B2_Mm2 SINE B2 -121 74 1 7 1338 1424 201 85 30 chr15 98775151 98775477 -4719497 - ORR1B1 LTR MaLR -43 351 8 7 1338 310 43 21 42 chr15 98775481 98775529 -4719445 - ORR1A3 LTR MaLR -8 318 272 7 1338 448 139 38 0 chr15 98775525 98775604 -4719370 - B2_Mm2 SINE B2 -3 192 111 7 1338 978 97 7 33 chr15 98775607 98775757 -4719217 - B2_Mm2 SINE B2 -31 164 19 7 1338 719 209 98 84 chr15 98775751 98775965 -4719009 - RLTR26 LTR ERVK -112 530 314 7 1338 1379 78 5 0 chr15 98775965 98776156 -4718818 - B2_Mm1a SINE B2 -1 192 1 7 1338 29 0 0 0 chr15 98776185 98776214 -4718760 + AT_rich Low_complexity Low_complexity 1 29 0 7 1338 449 0 0 0 chr15 98776233 98776292 -4718682 - PB1D9 SINE Alu -61 59 1 7 1338 1530 160 108 7 chr15 98776294 98776590 -4718384 - RLTR26 LTR ERVK -316 326 1 7 1338 262 213 0 0 chr15 98776591 98776638 -4718336 - PB1D9 SINE Alu -48 72 26 7 1338 1265 99 16 5 chr15 98776649 98776841 -4718133 - B2_Mm2 SINE B2 0 195 2 7 1338 342 0 0 0 chr15 98777111 98777149 -4717825 + (TC)n Simple_repeat Simple_repeat 2 39 0 7 1338 243 158 16 81 chr15 98777185 98777247 -4717727 - B2_Mm2 SINE B2 -91 104 47 7 1338 1202 107 22 0 chr15 98777292 98777470 -4717504 - B2_Mm2 SINE B2 -12 183 2 7 1338 784 164 7 40 chr15 98777480 98777632 -4717342 - B1_Mur2 SINE Alu -1 148 2 7 1338 434 287 109 14 chr15 98777660 98777798 -4717176 - RSINE1 SINE B4 -12 153 3 7 1338 568 157 139 16 chr15 98777892 98778021 -4716953 + B1_Mur2 SINE Alu 5 149 0 7 1338 1210 86 45 11 chr15 98778027 98778204 -4716770 + B2_Mm2 SINE B2 4 186 -9 7 1338 530 144 0 58 chr15 98779238 98779341 -4715633 - B1_Mur3 SINE Alu -1 148 52 7 1338 595 192 57 32 chr15 98779571 98779695 -4715279 - B1_Mur1 SINE Alu -21 128 2 7 1338 255 61 0 0 chr15 98779695 98779728 -4715246 + (TATG)n Simple_repeat Simple_repeat 3 35 0 7 1338 494 299 73 0 chr15 98779745 98779882 -4715092 - ID_B1 SINE B4 -7 217 71 7 1338 849 242 118 22 chr15 98779910 98780196 -4714778 + MTD LTR MaLR 18 339 -57 7 1338 36 23 0 0 chr15 98783367 98783410 -4711564 + AT_rich Low_complexity Low_complexity 1 43 0 7 1338 290 238 0 45 chr15 98784562 98784628 -4710346 + ID_B1 SINE B4 99 161 -63 7 1338 318 261 80 18 chr15 98784628 98784741 -4710233 + PB1D7 SINE Alu 1 120 0 7 1338 310 182 15 29 chr15 98784748 98784816 -4710158 + L1MEg LINE L1 1883 1949 -4135 7 1338 22 0 0 0 chr15 98786032 98786054 -4708920 + AT_rich Low_complexity Low_complexity 1 22 0 7 1338 432 111 0 0 chr15 98786142 98786214 -4708760 + (TG)n Simple_repeat Simple_repeat 2 73 0 7 1338 494 270 9 0 chr15 98786217 98786328 -4708646 - RSINE1 SINE B4 -38 127 16 7 1338 261 0 0 0 chr15 98786344 98786373 -4708601 + (TAA)n Simple_repeat Simple_repeat 2 30 0 7 1338 295 120 20 0 chr15 98786949 98786999 -4707975 - ID4 SINE ID -31 52 2 7 1338 576 276 0 36 chr15 98787228 98787367 -4707607 - ID_B1 SINE B4 -1 223 90 7 1338 522 0 0 0 chr15 98787399 98787457 -4707517 + (TTG)n Simple_repeat Simple_repeat 3 60 0 7 1338 890 133 0 0 chr15 98787461 98787589 -4707385 - B1_Mur4 SINE Alu -10 140 13 7 1338 624 206 150 7 chr15 98787593 98787740 -4707234 - ORR1C1 LTR MaLR -208 170 3 7 1338 285 29 0 0 chr15 98787740 98787774 -4707200 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1338 957 196 37 16 chr15 98788077 98788264 -4706710 + B3 SINE B2 2 192 -24 7 1338 1261 48 0 0 chr15 98788292 98788439 -4706535 - B1_Mus2 SINE Alu 0 147 1 7 1338 254 293 7 75 chr15 98788495 98788674 -4706300 - B4A SINE B4 0 165 12 7 1338 634 278 114 0 chr15 98788675 98788851 -4706123 - ID_B1 SINE B4 -25 199 4 7 1338 351 0 0 0 chr15 98788862 98788901 -4706073 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 7 1338 1209 76 6 0 chr15 98788901 98789059 -4705915 - B2_Mm1a SINE B2 -33 160 2 7 1338 1007 122 69 48 chr15 98789061 98789250 -4705724 - B2_Mm2 SINE B2 -2 193 1 7 1338 1198 282 62 58 chr15 98789322 98789789 -4705185 + MTC-int LTR MaLR 620 1088 -170 7 1338 557 248 82 8 chr15 98789713 98789847 -4705127 - B1_Mur3 SINE Alu -3 146 3 7 1338 264 317 129 84 chr15 98789717 98789872 -4705102 - B4 SINE B4 -73 219 58 7 1338 234 223 82 41 chr15 98789875 98789938 -4705036 + MTC-int LTR MaLR 1010 1077 -181 7 1338 336 102 0 0 chr15 98789938 98789987 -4704987 + (TATG)n Simple_repeat Simple_repeat 2 50 0 7 1338 234 223 82 41 chr15 98789987 98790021 -4704953 + MTC-int LTR MaLR 1078 1110 -148 7 1338 743 282 11 23 chr15 98790085 98790298 -4704676 + MTD LTR MaLR 1 209 -210 7 1338 406 158 0 84 chr15 98790298 98790381 -4704593 + B1_Mus1 SINE Alu 1 76 -72 7 1338 395 288 85 0 chr15 98790378 98790496 -4704478 + ID_B1 SINE B4 95 222 -2 7 1338 230 288 109 83 chr15 98790666 98790722 -4704252 - YREP_Mm Unknown Unknown -1435 377 186 7 1338 1092 37 0 7 chr15 98790722 98790853 -4704121 + B1_Mus1 SINE Alu 10 140 -8 7 1338 314 0 49 0 chr15 98790853 98790894 -4704080 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 7 1338 767 283 136 53 chr15 98790903 98791321 -4703653 - Lx6 LINE L1 -19 7441 6989 7 1338 5447 208 45 38 chr15 98791318 98791402 -4703572 - Lx7 LINE L1 -861 6835 6761 7 1338 1398 84 11 0 chr15 98791402 98791592 -4703382 - B2_Mm1t SINE B2 0 193 2 7 1338 5447 208 45 38 chr15 98791592 98792548 -4702426 - Lx7 LINE L1 -936 6760 5786 7 1338 180 0 0 0 chr15 98792548 98792568 -4702406 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8 1338 1219 48 7 0 chr15 98792569 98792715 -4702259 - B1_Mm SINE Alu 0 147 1 8 1338 5447 163 22 119 chr15 98792715 98793064 -4701910 - Lx7 LINE L1 -88 5792 5470 7 1338 1031 165 6 18 chr15 98793092 98793292 -4701682 - Lx7 LINE L1 -810 5549 5351 7 1338 2700 174 105 21 chr15 98793271 98793586 -4701388 - Lx5 LINE L1 0 7050 6703 8 1338 234 0 0 0 chr15 98793586 98793612 -4701362 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 8 1338 2700 174 105 21 chr15 98793612 98793818 -4701156 - Lx5 LINE L1 -348 6702 6487 8 1338 1343 94 10 10 chr15 98793828 98794021 -4700953 - B2_Mm1t SINE B2 0 193 1 8 1338 6196 126 27 47 chr15 98794022 98794992 -4699982 - Lx7 LINE L1 -514 5366 4410 7 1338 2714 36 8 186 chr15 98794992 98795464 -4699510 + RLTR10 LTR ERVK 1 388 -2 8 1338 6196 126 27 47 chr15 98795464 98795676 -4699298 - Lx7 LINE L1 -1471 4409 4207 7 1338 252 0 31 0 chr15 98795676 98795708 -4699266 - L1_Mur3 LINE L1 -1880 4000 3968 8 1338 2124 178 33 36 chr15 98795710 98796130 -4698844 - Lx7 LINE L1 -6808 920 502 7 1338 1538 176 26 15 chr15 98796139 98796405 -4698569 - RLTR14 LTR ERV1 -113 269 1 8 1338 287 219 53 5 chr15 98796450 98796585 -4698389 - Lx7 LINE L1 -7503 225 52 7 1338 222 136 0 0 chr15 98796766 98796810 -4698164 + (CAGG)n Simple_repeat Simple_repeat 2 45 0 8 1338 279 0 0 0 chr15 98796821 98796852 -4698122 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 1338 653 268 7 0 chr15 98796853 98796991 -4697983 + ID_B1 SINE B4 86 224 0 8 1338 1327 81 0 6 chr15 98797006 98797181 -4697793 + B2_Mm2 SINE B2 2 175 -20 8 1338 494 202 83 21 chr15 98797265 98797361 -4697613 - PB1D7 SINE Alu -1 119 18 8 1338 265 337 56 0 chr15 98797396 98797485 -4697489 - B1F1 SINE Alu -34 115 22 8 1338 22 35 0 0 chr15 98797491 98797520 -4697454 + AT_rich Low_complexity Low_complexity 1 29 0 8 1338 330 26 0 0 chr15 98797535 98797574 -4697400 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1338 212 222 56 0 chr15 98797579 98797633 -4697341 - B3A SINE B2 -140 58 2 8 1338 425 295 25 0 chr15 98797642 98797764 -4697210 - ID_B1 SINE B4 -8 216 92 8 1338 623 208 101 34 chr15 98797804 98797983 -4696991 + RMER1C Other Other 1131 1321 -21 8 1338 249 108 0 0 chr15 98797984 98798021 -4696953 + (GAA)n Simple_repeat Simple_repeat 1 37 0 8 1338 254 278 125 0 chr15 98798058 98798130 -4696844 + ID SINE ID 6 86 -138 8 1338 805 140 0 139 chr15 98798183 98798201 -4696773 + B1_Mus1 SINE Alu 6 17 -131 8 1338 4871 119 19 9 chr15 98798201 98798949 -4696025 + RMER6A LTR ERVK 2 756 0 8 1338 805 140 0 139 chr15 98798949 98799096 -4695878 + B1_Mus1 SINE Alu 18 148 0 8 1338 206 225 0 0 chr15 98799185 98799225 -4695749 + CT-rich Low_complexity Low_complexity 1 40 0 8 1338 526 254 72 99 chr15 98799225 98799448 -4695526 - ID_B1 SINE B4 -5 219 3 8 1338 471 226 184 8 chr15 98799708 98799833 -4695141 - B4A SINE B4 -116 176 30 8 1338 34 0 0 0 chr15 98799853 98799887 -4695087 + AT_rich Low_complexity Low_complexity 1 34 0 8 1338 987 186 170 86 chr15 98800082 98800418 -4694556 - ORR1D2 LTR MaLR -6 364 1 8 1338 315 0 0 0 chr15 98800752 98800787 -4694187 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 1338 336 327 37 18 chr15 98800802 98800911 -4694063 - RSINE1 SINE B4 -37 128 18 8 1338 389 294 28 0 chr15 98800932 98801041 -4693933 - PB1D10 SINE Alu -5 112 1 8 1338 469 129 0 0 chr15 98801100 98801170 -4693804 - B3 SINE B2 -146 70 1 8 1338 510 297 87 7 chr15 98801205 98801354 -4693620 - RSINE1 SINE B4 -2 163 3 8 1338 281 267 246 12 chr15 98802129 98802296 -4692678 + ID_B1 SINE B4 1 206 -18 8 1338 348 43 0 0 chr15 98802296 98802342 -4692632 + (GA)n Simple_repeat Simple_repeat 2 47 0 8 1338 3113 58 33 2 chr15 98802354 98802753 -4692221 + RLTR10A LTR ERVK 1 411 0 8 1338 30 0 0 0 chr15 98802831 98802861 -4692113 + AT_rich Low_complexity Low_complexity 1 30 0 8 1338 226 261 14 0 chr15 98802962 98803031 -4691943 - RLTR22_Mur LTR ERVK -471 1377 1308 8 1338 464 267 118 59 chr15 98803065 98803252 -4691722 + B3A SINE B2 1 198 0 8 1338 565 146 0 59 chr15 98803280 98803382 -4691592 + PB1D9 SINE Alu 23 118 -2 8 1338 1140 246 18 7 chr15 98803449 98803723 -4691251 - Lx7 LINE L1 -410 7286 7010 8 1338 284 298 169 7 chr15 98804143 98804285 -4690689 + RSINE1 SINE B4 1 165 0 8 1338 431 266 89 9 chr15 98804392 98804531 -4690443 + ID_B1 SINE B4 80 224 0 8 1338 402 252 9 55 chr15 98804562 98804681 -4690293 + B1F1 SINE Alu 36 149 0 8 1338 914 47 79 0 chr15 98804728 98804855 -4690119 + B1_Mur4 SINE Alu 9 145 -5 8 1338 673 190 19 10 chr15 98804913 98805055 -4689919 + B3 SINE B2 1 143 -55 8 1338 440 193 32 54 chr15 98804995 98805088 -4689886 - B1_Mus2 SINE Alu -49 98 8 8 1338 312 209 0 56 chr15 98805034 98805105 -4689869 - B4 SINE B4 -146 146 80 8 1338 544 280 19 0 chr15 98805110 98805267 -4689707 - B3 SINE B2 -14 202 43 8 1338 2338 52 56 138 chr15 98805308 98805685 -4689289 + ORR1A1 LTR MaLR 1 346 0 8 1338 364 170 206 31 chr15 98805739 98805836 -4689138 - RSINE1 SINE B4 -41 124 11 8 1338 559 266 40 37 chr15 98805801 98806009 -4688965 + ID_B1 SINE B4 15 218 -74 8 1338 482 313 96 10 chr15 98806018 98806215 -4688759 + B4A SINE B4 2 215 -77 8 1338 195 42 0 0 chr15 98806215 98806239 -4688735 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 8 1338 671 254 69 37 chr15 98806317 98806385 -4688589 + ID_B1 SINE B4 2 195 -29 8 1338 759 129 0 33 chr15 98806385 98806505 -4688469 + B1_Mur2 SINE Alu 2 117 -32 8 1338 874 176 7 20 chr15 98806544 98806695 -4688279 - B1_Mur2 SINE Alu 0 149 1 8 1338 289 43 55 55 chr15 98806710 98806756 -4688218 + A-rich Low_complexity Low_complexity 3 49 0 8 1338 1255 48 0 0 chr15 98806756 98806903 -4688071 + B1_Mus2 SINE Alu 1 147 0 8 1338 289 43 55 55 chr15 98806903 98806929 -4688045 + A-rich Low_complexity Low_complexity 50 75 0 8 1338 325 290 21 21 chr15 98807043 98807138 -4687836 + ID_B1 SINE B4 111 205 -19 8 1338 216 274 59 0 chr15 98807226 98807277 -4687697 + AluF_3 SINE Alu 146 199 -112 8 1338 231 342 13 0 chr15 98807295 98807374 -4687600 - RSINE1 SINE B4 -64 101 22 8 1338 435 256 8 47 chr15 98807384 98807511 -4687463 - ID_B1 SINE B4 -1 223 102 8 1338 304 331 48 27 chr15 98807385 98807531 -4687443 - B1F1 SINE Alu 0 149 1 8 1338 557 101 0 12 chr15 98809023 98809103 -4685871 + B2_Mm2 SINE B2 1 79 -116 8 1338 1221 35 0 0 chr15 98809742 98809883 -4685091 + B1_Mus1 SINE Alu 1 141 -7 8 1338 216 0 0 0 chr15 98809886 98809910 -4685064 + (A)n Simple_repeat Simple_repeat 1 24 0 8 1338 1461 64 16 0 chr15 98809928 98810116 -4684858 + B2_Mm1t SINE B2 2 192 -1 8 1338 516 222 0 0 chr15 98810725 98810825 -4684149 + B1F SINE Alu 10 109 -40 8 1338 1239 34 7 0 chr15 98811084 98811230 -4683744 + B1_Mus1 SINE Alu 2 148 0 8 1338 206 86 57 0 chr15 98811448 98811483 -4683491 + (TCTCTG)n Simple_repeat Simple_repeat 6 42 0 8 1338 246 128 0 0 chr15 98811526 98811565 -4683409 + (T)n Simple_repeat Simple_repeat 1 39 0 8 1338 1675 173 26 68 chr15 98811566 98811994 -4682980 + RMER17C LTR ERVK 1 410 0 8 1338 877 152 21 0 chr15 98812000 98812145 -4682829 - B1F2 SINE Alu 0 149 2 8 1338 375 281 88 0 chr15 98812194 98812308 -4682666 - ID_B1 SINE B4 -2 222 99 8 1338 337 305 122 0 chr15 98812308 98812325 -4682649 - B1F SINE Alu -2 147 1 8 1338 21 0 0 0 chr15 98812908 98812929 -4682045 + AT_rich Low_complexity Low_complexity 1 21 0 8 1338 27 0 0 0 chr15 98813362 98813389 -4681585 + AT_rich Low_complexity Low_complexity 1 27 0 8 1338 486 236 0 0 chr15 98813396 98813485 -4681489 + B1F2 SINE Alu 41 129 -20 8 1338 206 174 0 21 chr15 98813595 98813642 -4681332 + GA-rich Low_complexity Low_complexity 3 48 0 8 1338 850 51 197 0 chr15 98814656 98814773 -4680201 - B1_Mus2 SINE Alu -7 140 1 8 1338 190 286 21 45 chr15 98815160 98815262 -4679712 - MIR SINE MIR -45 223 122 8 1338 1199 68 108 0 chr15 98816674 98816850 -4678124 - B2_Mm2 SINE B2 0 195 1 8 1338 204 40 0 0 chr15 98817028 98817053 -4677921 + (TGGGGG)n Simple_repeat Simple_repeat 4 28 0 8 1338 369 244 0 0 chr15 98817054 98817132 -4677842 - PB1D10 SINE Alu -39 78 1 8 1338 28 71 0 0 chr15 98817380 98817436 -4677538 + AT_rich Low_complexity Low_complexity 1 56 0 8 1338 313 241 73 9 chr15 98818170 98818279 -4676695 - PB1D7 SINE Alu 0 120 5 8 1338 191 36 36 0 chr15 98818368 98818396 -4676578 + (TTCTCC)n Simple_repeat Simple_repeat 2 30 0 8 1338 1868 154 95 11 chr15 98818511 98818878 -4676096 - RMER10B LTR ERVL 0 398 1 8 1338 306 0 0 0 chr15 98819512 98819546 -4675428 + (TG)n Simple_repeat Simple_repeat 1 34 0 8 1338 186 43 0 0 chr15 98819658 98819681 -4675293 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 1338 239 347 0 14 chr15 98819775 98819848 -4675126 + RSINE1 SINE B4 1 72 -93 8 1338 896 165 32 16 chr15 98819848 98820033 -4674941 - RMER17C LTR ERVK 0 410 223 8 1338 1075 64 0 7 chr15 98820038 98820179 -4674795 + B1_Mus2 SINE Alu 8 147 0 8 1338 878 215 13 39 chr15 98820167 98820399 -4674575 - RMER17C LTR ERVK -184 226 1 8 1338 27 0 0 0 chr15 98820611 98820638 -4674336 + GC_rich Low_complexity Low_complexity 1 27 0 8 1338 206 261 0 0 chr15 98821697 98821743 -4673231 + GA-rich Low_complexity Low_complexity 1 46 0 8 1338 583 220 17 8 chr15 98822360 98822479 -4672495 + PB1D9 SINE Alu 1 120 0 8 1338 221 303 102 39 chr15 98823916 98824043 -4670931 + RSINE1 SINE B4 3 137 -28 8 1338 451 316 27 43 chr15 98824061 98824246 -4670728 + B3A SINE B2 6 187 -11 8 1338 612 0 0 0 chr15 98824663 98824731 -4670243 + (CATA)n Simple_repeat Simple_repeat 2 69 0 9 1338 862 177 20 0 chr15 98824756 98824903 -4670071 + B1_Mur4 SINE Alu 1 150 0 9 1338 1930 43 0 0 chr15 98825244 98825476 -4669498 - L1Md_F2 LINE L1 -13 6569 6338 9 1338 1372 85 32 0 chr15 98826310 98826498 -4668476 - B2_Mm2 SINE B2 0 195 2 9 1338 37 23 0 0 chr15 98826840 98826884 -4668090 + AT_rich Low_complexity Low_complexity 1 44 0 9 1338 1201 14 7 0 chr15 98827032 98827170 -4667804 + B1_Mus2 SINE Alu 3 141 -6 9 1338 688 198 0 0 chr15 98827189 98827315 -4667659 - B3 SINE B2 -90 126 1 9 1338 258 218 0 0 chr15 98827536 98827591 -4667383 + PB1 SINE Alu 1 55 -72 9 1338 2445 119 32 3 chr15 98827591 98827962 -4667012 - RLTR14 LTR ERV1 0 382 1 9 167 934 216 71 19 chr15 98828106 98828318 -4666656 + ID_B1 SINE B4 1 223 -1 9 1339 604 271 104 37 chr15 98828409 98828677 -4666297 + MTE2a LTR MaLR 1 286 -93 9 1339 1587 214 132 21 chr15 98828677 98829101 -4665873 - RLTR18B LTR ERVK 0 512 42 9 1339 213 39 0 0 chr15 98829104 98829130 -4665844 + (TGGGGG)n Simple_repeat Simple_repeat 6 31 0 9 1339 745 158 71 7 chr15 98829136 98829276 -4665698 + URR1A DNA MER1_type 69 217 -9 9 1339 237 133 89 0 chr15 98829284 98829329 -4665645 - RLTR18B LTR ERVK -463 49 1 9 1339 404 160 9 130 chr15 98829329 98829425 -4665549 + MTE2a LTR MaLR 297 379 0 9 1339 1527 49 0 5 chr15 98829462 98829648 -4665326 + B2_Mm2 SINE B2 4 188 -7 9 1339 249 322 96 32 chr15 98829648 98829663 -4665311 + B4 SINE B4 73 97 -195 9 1339 656 207 49 28 chr15 98829663 98829807 -4665167 + B1_Mur1 SINE Alu 3 149 0 9 1339 276 278 49 49 chr15 98829824 98829926 -4665048 + B3A SINE B2 1 102 -96 9 1339 279 0 0 0 chr15 98830027 98830058 -4664916 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 9 1339 602 278 99 15 chr15 98830146 98830301 -4664673 + ID_B1 SINE B4 6 165 -59 9 1339 583 13 26 0 chr15 98830301 98830377 -4664597 + (TCTA)n Simple_repeat Simple_repeat 3 80 0 9 1339 602 278 99 15 chr15 98830377 98830422 -4664552 + ID_B1 SINE B4 166 222 -2 9 1339 389 282 8 60 chr15 98830418 98830431 -4664543 + MT2B LTR ERVL 143 153 -448 9 1339 1581 42 10 0 chr15 98830431 98830623 -4664351 + B2_Mm2 SINE B2 2 195 0 9 1339 389 282 8 60 chr15 98830623 98830635 -4664339 + MT2B LTR ERVL 154 253 -348 9 1339 625 110 66 0 chr15 98830635 98830726 -4664248 + B1_Mus2 SINE Alu 2 98 -49 9 1339 239 0 32 0 chr15 98830735 98830766 -4664208 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 9 1339 797 222 11 31 chr15 98831222 98831413 -4663561 - B3 SINE B2 -29 187 1 9 1339 230 206 87 14 chr15 98831551 98831584 -4663390 + PB1D7 SINE Alu 39 112 -8 9 1339 236 111 0 0 chr15 98831584 98831620 -4663354 + ID_B1 SINE B4 181 216 -8 9 1339 363 279 102 58 chr15 98831634 98831652 -4663322 + ID_B1 SINE B4 80 222 -2 9 1339 464 235 143 0 chr15 98831652 98831771 -4663203 + B1F2 SINE Alu 12 147 -2 9 1339 234 286 97 21 chr15 98831846 98831939 -4663035 - RMER15 LTR ERVL -24 551 452 9 1339 254 288 0 14 chr15 98832353 98832427 -4662547 + C-rich Low_complexity Low_complexity 5 77 0 9 1339 263 222 15 60 chr15 98832431 98832498 -4662476 - B1_Mur3 SINE Alu -43 106 43 9 1339 1147 159 261 4 chr15 98832497 98832769 -4662205 + ORR1D-int LTR MaLR 916 1257 -113 9 1339 4041 128 243 7 chr15 98832862 98833637 -4661337 + RMER17B LTR ERVK 1 958 0 9 1339 1640 31 0 20 chr15 98833820 98834017 -4660957 + B2_Mm1a SINE B2 1 193 0 9 1339 368 78 20 0 chr15 98834076 98834127 -4660847 - B2_Mm1t SINE B2 -141 52 1 9 1339 848 190 29 39 chr15 98834156 98834345 -4660629 - B3 SINE B2 -5 190 2 9 1339 381 122 435 35 chr15 98834347 98834432 -4660542 - PB1D9 SINE Alu -1 119 1 9 1339 772 226 20 0 chr15 98834514 98834660 -4660314 + B1_Mur2 SINE Alu 1 149 0 9 1339 201 147 0 0 chr15 98835586 98835620 -4659354 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 9 1339 395 259 35 61 chr15 98835622 98835737 -4659237 - B1F SINE Alu -1 148 37 9 1339 407 286 40 85 chr15 98835769 98835968 -4659006 + B3A SINE B2 2 191 -7 9 1339 865 158 20 0 chr15 98835976 98836122 -4658852 + B1_Mur4 SINE Alu 2 150 0 9 1339 1219 48 7 7 chr15 98836125 98836272 -4658702 + B1_Mus2 SINE Alu 1 147 0 9 1339 200 59 0 29 chr15 98836273 98836308 -4658666 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 9 1339 1337 60 55 0 chr15 98836808 98836990 -4657984 + B2_Mm1a SINE B2 1 192 -1 9 1339 207 0 0 0 chr15 98837028 98837051 -4657923 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 9 1339 228 67 0 0 chr15 98837066 98837096 -4657878 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 9 1339 438 267 26 8 chr15 98837277 98837394 -4657580 - B1_Mur3 SINE Alu -25 124 6 9 1339 1331 51 103 0 chr15 98837479 98837654 -4657320 - B2_Mm1a SINE B2 0 193 1 9 1339 1096 85 7 0 chr15 98837661 98837802 -4657172 - B1_Mus2 SINE Alu -5 142 1 9 1339 591 301 60 6 chr15 98837806 98837973 -4657001 - B3A SINE B2 -22 176 1 9 1339 1374 88 16 10 chr15 98838008 98838184 -4656790 + B2_Mm2 SINE B2 1 177 -18 9 1339 769 186 0 20 chr15 98838184 98838332 -4656642 + B1_Mur1 SINE Alu 5 149 0 9 1339 1374 88 16 10 chr15 98838332 98838349 -4656625 + B2_Mm2 SINE B2 178 194 -1 9 1339 547 271 25 83 chr15 98838349 98838402 -4656572 + B1F SINE Alu 1 53 -96 9 1339 1319 110 0 25 chr15 98838402 98838598 -4656376 + B2_Mm2 SINE B2 1 191 -4 9 1339 547 271 25 83 chr15 98838598 98838700 -4656274 + B1F SINE Alu 54 146 -3 9 1339 217 296 54 108 chr15 98838721 98838850 -4656124 + PB1 SINE Alu 3 124 -3 9 1339 569 217 42 0 chr15 98838734 98838854 -4656120 + ID_B1 SINE B4 100 224 0 9 1339 366 23 0 0 chr15 98838854 98838897 -4656077 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 1339 1074 36 48 41 chr15 98839057 98839203 -4655771 - B1_Mm SINE Alu 0 147 1 9 1339 1529 48 16 0 chr15 98839708 98839895 -4655079 - B2_Mm2 SINE B2 -3 192 3 9 1339 409 292 33 8 chr15 98840038 98840159 -4654815 + B1F1 SINE Alu 24 147 -2 9 1339 1372 80 0 0 chr15 98840164 98840339 -4654635 + B2_Mm2 SINE B2 2 176 -19 9 1339 1324 89 10 26 chr15 98840339 98840534 -4654440 + B2_Mm1t SINE B2 2 193 0 9 1339 302 196 71 0 chr15 98840543 98840599 -4654375 + PB1D9 SINE Alu 5 64 -56 9 1339 596 208 73 40 chr15 98840599 98840749 -4654225 + RSINE1 SINE B4 5 159 -6 9 1339 449 62 15 0 chr15 98840982 98841047 -4653927 + (TTTA)n Simple_repeat Simple_repeat 2 67 0 9 1339 1204 51 0 0 chr15 98841047 98841185 -4653789 - B1_Mus2 SINE Alu -9 138 1 9 1339 628 304 18 44 chr15 98841202 98841426 -4653548 - B3A SINE B2 0 216 2 9 1339 396 0 0 0 chr15 98841437 98841481 -4653493 + (TG)n Simple_repeat Simple_repeat 1 44 0 9 1339 438 298 26 0 chr15 98841482 98841596 -4653378 - RSINE1 SINE B4 -41 124 8 9 1339 223 196 0 56 chr15 98841598 98841652 -4653322 + RSINE1 SINE B4 48 98 -67 9 1339 405 0 0 0 chr15 98841656 98841701 -4653273 + (CA)n Simple_repeat Simple_repeat 1 45 0 9 1339 460 53 26 13 chr15 98841789 98841865 -4653109 + (CATA)n Simple_repeat Simple_repeat 2 78 0 9 1339 1359 74 5 40 chr15 98841950 98842148 -4652826 + B2_Mm1t SINE B2 2 192 -1 9 1339 616 167 132 0 chr15 98842400 98842514 -4652460 + B3 SINE B2 2 130 -86 9 1339 259 314 107 21 chr15 98842514 98842540 -4652434 + RSINE1 SINE B4 3 154 -11 9 1339 288 0 0 0 chr15 98842796 98842828 -4652146 + (CCCCCA)n Simple_repeat Simple_repeat 3 34 0 9 1339 288 77 0 0 chr15 98843137 98843176 -4651798 + (TC)n Simple_repeat Simple_repeat 1 39 0 9 1339 1001 86 37 133 chr15 98843178 98843366 -4651608 - B2_Mm2 SINE B2 -23 172 3 9 1339 245 57 0 0 chr15 98843466 98843501 -4651473 - MTC-int LTR MaLR -282 976 942 9 1339 331 237 0 0 chr15 98843516 98843575 -4651399 + B1F SINE Alu 68 126 -23 9 1339 411 235 26 154 chr15 98843594 98843612 -4651362 + MT2B LTR ERVL 153 200 -401 9 1339 693 126 0 46 chr15 98843612 98843720 -4651254 + B1_Mur4 SINE Alu 9 111 -39 9 1339 411 235 26 154 chr15 98843720 98843750 -4651224 + MT2B LTR ERVL 201 288 -313 9 1339 353 256 47 0 chr15 98843744 98843830 -4651144 + PB1D10 SINE Alu 26 115 -2 9 1339 728 235 0 45 chr15 98843840 98843996 -4650978 + B1_Mur1 SINE Alu 1 149 0 9 1339 185 83 0 27 chr15 98844000 98844037 -4650937 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 9 1339 296 221 98 26 chr15 98844076 98844229 -4650745 + L1MD LINE L1 2804 2967 -3179 9 1339 262 309 82 0 chr15 98844310 98844407 -4650567 + MER21B LTR ERV1 4 108 -755 9 1339 1067 134 107 10 chr15 98844487 98844682 -4650292 + MTC LTR MaLR 1 214 -207 9 1339 1128 107 6 0 chr15 98844682 98844841 -4650133 + B2_Mm1a SINE B2 1 160 -33 9 1339 409 106 0 5 chr15 98844893 98844958 -4650016 + B2_Mm2 SINE B2 47 109 -107 9 1339 861 210 144 5 chr15 98845014 98845201 -4649773 + MTC LTR MaLR 209 421 0 9 1339 3542 208 78 66 chr15 98845200 98846160 -4648814 + MTC-int LTR MaLR 2 978 -120 9 1339 1319 56 5 62 chr15 98846175 98846208 -4648766 - B2_Mm1a SINE B2 -11 182 161 9 1339 315 0 0 0 chr15 98846208 98846243 -4648731 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 9 1339 1319 56 5 62 chr15 98846243 98846401 -4648573 - B2_Mm1a SINE B2 -33 160 2 9 1339 260 70 0 23 chr15 98846624 98846668 -4648306 + (TTTTTG)n Simple_repeat Simple_repeat 2 44 0 9 1339 2389 123 68 32 chr15 98846672 98847084 -4647890 - RMER6B LTR ERVK -32 429 3 9 1339 1336 85 11 0 chr15 98847156 98847333 -4647641 + B2_Mm1t SINE B2 3 181 -12 9 1339 280 173 0 19 chr15 98847378 98847431 -4647543 + B2_Mm2 SINE B2 47 98 -97 9 1339 21 36 0 0 chr15 98847441 98847469 -4647505 + AT_rich Low_complexity Low_complexity 1 28 0 9 1339 907 154 7 0 chr15 98847662 98847798 -4647176 - B1_Mus2 SINE Alu -1 146 10 1 1339 470 296 8 17 chr15 98848967 98849084 -4645890 - RSINE1 SINE B4 -49 116 1 1 1339 262 115 57 19 chr15 98849084 98849137 -4645837 - PB1D10 SINE Alu 0 117 63 1 1339 414 278 0 18 chr15 98849090 98849200 -4645774 - ID_B1 SINE B4 -6 218 111 1 1339 356 248 113 57 chr15 98849352 98849476 -4645498 + ID_B1 SINE B4 94 224 0 1 1339 772 80 16 8 chr15 98850343 98850469 -4644505 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 1 1339 896 62 125 44 chr15 98850470 98850606 -4644368 - B1_Mus2 SINE Alu 0 147 1 1 1339 265 176 20 0 chr15 98850672 98850723 -4644251 + PB1D10 SINE Alu 37 88 -29 1 1339 875 247 20 25 chr15 98850830 98851029 -4643945 + ID_B1 SINE B4 1 198 -26 1 1339 1572 43 0 21 chr15 98851083 98851274 -4643700 - B2_Mm1t SINE B2 -6 187 1 1 1339 1406 54 42 26 chr15 98851279 98851468 -4643506 - B2_Mm2 SINE B2 -2 193 2 1 1339 530 249 57 34 chr15 98851476 98851655 -4643319 - B3A SINE B2 -2 196 1 1 1339 845 238 136 91 chr15 98851729 98852090 -4642884 + MTE2a LTR MaLR 1 377 -2 1 1339 1400 79 16 16 chr15 98852114 98852307 -4642667 + B2_Mm2 SINE B2 2 194 -1 1 1339 334 261 243 6 chr15 98852316 98852493 -4642481 + ID_B1 SINE B4 5 223 -1 1 1339 1333 125 5 0 chr15 98852497 98852689 -4642285 + B2_Mm2 SINE B2 1 193 -2 1 1339 464 253 36 121 chr15 98852732 98852898 -4642076 + B3A SINE B2 47 198 0 1 1339 1302 88 41 0 chr15 98852931 98853102 -4641872 + B2_Mm2 SINE B2 3 180 -15 1 1339 1607 37 5 0 chr15 98853102 98853290 -4641684 + B2_Mm1a SINE B2 2 190 -3 1 1339 185 0 40 0 chr15 98853297 98853322 -4641652 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1339 241 150 0 0 chr15 98853333 98853373 -4641601 + B3 SINE B2 1 40 -176 1 1339 1249 41 7 0 chr15 98853374 98853519 -4641455 + B1_Mm SINE Alu 2 147 0 1 1339 252 0 0 0 chr15 98853519 98853547 -4641427 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 1 1339 649 290 11 30 chr15 98853555 98853738 -4641236 + B3 SINE B2 27 195 0 1 1339 641 262 36 25 chr15 98853808 98854004 -4640970 + B3 SINE B2 4 201 -15 1 1339 23 33 0 0 chr15 98854005 98854035 -4640939 + AT_rich Low_complexity Low_complexity 1 30 0 1 1339 838 169 14 27 chr15 98854035 98854181 -4640793 + B1_Mur3 SINE Alu 1 144 -5 1 1339 444 243 65 0 chr15 98854680 98854787 -4640187 - B1F SINE Alu -35 114 1 1 1339 361 281 48 40 chr15 98854787 98854798 -4640176 - ID_B1 SINE B4 -32 192 73 1 1339 1205 129 118 10 chr15 98854798 98855001 -4639973 - URR1B DNA MER1_type 0 225 1 1 1339 283 213 66 0 chr15 98855170 98855231 -4639743 - ID4 SINE ID -14 69 5 1 1339 441 241 36 36 chr15 98855328 98855440 -4639534 - B1F2 SINE Alu -17 132 21 1 1339 33 0 0 0 chr15 98855656 98855689 -4639285 + AT_rich Low_complexity Low_complexity 1 33 0 1 1339 463 264 70 29 chr15 98855689 98855710 -4639264 - B2_Mm2 SINE B2 0 195 170 1 1339 1234 55 0 0 chr15 98855710 98855855 -4639119 - B1_Mus2 SINE Alu 0 147 3 1 1339 590 221 25 11 chr15 98855855 98856005 -4638969 - B3 SINE B2 -26 169 17 1 1339 362 147 15 0 chr15 98856359 98856427 -4638547 + CT-rich Low_complexity Low_complexity 1 69 0 1 1339 1158 110 0 0 chr15 98856439 98856612 -4638362 + (TTCTCC)n Simple_repeat Simple_repeat 3 175 0 1 1339 1311 97 27 5 chr15 98856612 98856789 -4638185 - B2_Mm2 SINE B2 -11 184 3 1 1339 727 214 128 0 chr15 98856843 98857030 -4637944 - B3 SINE B2 -5 211 1 1 1339 338 237 103 7 chr15 98857073 98857209 -4637765 - B2_Mm2 SINE B2 0 195 47 1 1339 1013 126 21 79 chr15 98857251 98857380 -4637594 - B2_Mm1t SINE B2 -14 179 63 1 1339 1258 27 7 0 chr15 98857380 98857526 -4637448 - B1_Mus1 SINE Alu 0 148 2 1 1339 1013 126 21 79 chr15 98857526 98857586 -4637388 - B2_Mm1t SINE B2 -131 62 1 1 1339 388 278 113 0 chr15 98857654 98857751 -4637223 - PB1 SINE Alu -12 115 8 1 1339 262 325 85 8 chr15 98857751 98857770 -4637204 - B4A SINE B4 -95 195 71 1 1339 1159 81 0 7 chr15 98857895 98858044 -4636930 - B1_Mus1 SINE Alu 0 148 1 1 1339 255 286 0 0 chr15 98858078 98858134 -4636840 - RSINE1 SINE B4 -14 151 96 1 1339 220 183 0 88 chr15 98858339 98858441 -4636533 + CT-rich Low_complexity Low_complexity 4 96 0 1 1339 1181 105 0 11 chr15 98858694 98858868 -4636106 - B2_Mm2 SINE B2 -23 172 1 1 1339 185 0 40 0 chr15 98858941 98858966 -4636008 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 1 1339 483 302 8 38 chr15 98859023 98859154 -4635820 - RSINE1 SINE B4 -35 130 4 1 1339 360 0 0 0 chr15 98859304 98859344 -4635630 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1339 324 0 0 0 chr15 98859344 98859379 -4635595 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 1339 552 276 73 108 chr15 98859382 98859609 -4635365 - B4A SINE B4 -10 282 63 1 1339 182 118 29 0 chr15 98861497 98861531 -4633443 + (TCTCCC)n Simple_repeat Simple_repeat 3 37 0 1 1339 450 0 0 0 chr15 98861531 98861581 -4633393 + (TTCC)n Simple_repeat Simple_repeat 2 51 0 1 1339 616 171 36 0 chr15 98861581 98861692 -4633282 - B1_Mus2 SINE Alu -12 135 21 1 1339 345 284 32 57 chr15 98861613 98861736 -4633238 - MT2B LTR ERVL -345 256 137 1 1339 382 257 61 44 chr15 98861710 98861824 -4633150 - ID_B1 SINE B4 -2 222 107 1 1339 361 185 75 21 chr15 98861876 98861970 -4633004 + PB1D9 SINE Alu 21 119 -1 1 1339 313 248 39 69 chr15 98861984 98862114 -4632860 + B1F SINE Alu 1 126 -23 1 1339 1309 73 67 0 chr15 98862219 98862398 -4632576 + B2_Mm2 SINE B2 3 193 -2 1 1339 609 221 114 16 chr15 98862477 98862661 -4632313 - ID_B1 SINE B4 -22 202 1 1 1339 225 0 0 0 chr15 98864069 98864094 -4630880 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1339 1114 207 29 5 chr15 98865381 98865590 -4629384 + B3 SINE B2 1 214 -2 1 1339 910 136 13 20 chr15 98865634 98865784 -4629190 + B1_Mur4 SINE Alu 1 149 -1 1 1339 1305 55 0 0 chr15 98866483 98866646 -4628328 + B2_Mm2 SINE B2 1 163 -32 1 1339 954 52 123 22 chr15 98868791 98868929 -4626045 + B2_Mm2 SINE B2 2 153 -42 1 1339 23 0 0 0 chr15 98868930 98868953 -4626021 + GC_rich Low_complexity Low_complexity 1 23 0 1 1339 1078 23 55 0 chr15 98868958 98869086 -4625888 - B1_Mm SINE Alu -12 135 1 1 1339 1180 42 0 20 chr15 98869691 98869837 -4625137 + B1_Mm SINE Alu 5 147 0 1 1339 317 266 181 80 chr15 98869940 98870128 -4624846 + ID_B1 SINE B4 2 208 -16 1 1339 630 188 86 53 chr15 98872154 98872292 -4622682 + B3 SINE B2 3 149 -67 1 1339 189 0 0 0 chr15 98872292 98872313 -4622661 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 1339 630 210 126 34 chr15 98872313 98872348 -4622626 + B3 SINE B2 150 198 0 1 1339 709 234 32 32 chr15 98873343 98873533 -4621441 - B3A SINE B2 -7 191 2 1 1339 252 258 0 16 chr15 98873593 98873656 -4621318 + CT-rich Low_complexity Low_complexity 5 66 0 1 1339 243 146 0 0 chr15 98873740 98873781 -4621193 + (TTCC)n Simple_repeat Simple_repeat 2 42 0 1 1339 885 67 58 0 chr15 98873807 98873927 -4621047 - B1_Mur4 SINE Alu 0 150 24 1 1339 335 119 15 0 chr15 98873930 98873997 -4620977 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 1339 248 247 165 58 chr15 98874129 98874232 -4620742 + B1F SINE Alu 36 149 0 1 1339 572 228 18 0 chr15 98874368 98874482 -4620492 - B3 SINE B2 -100 116 1 1 1339 890 144 65 27 chr15 98874562 98874748 -4620226 - B2_Mm2 SINE B2 0 195 3 1 1339 808 159 45 15 chr15 98874991 98875125 -4619849 + B1_Mm SINE Alu 9 146 -1 1 1339 410 261 33 42 chr15 98875207 98875327 -4619647 - PB1D7 SINE Alu -1 119 1 1 1339 986 307 108 42 chr15 98875342 98875794 -4619180 + MLT1L LTR MaLR 50 531 -79 1 1339 288 0 0 0 chr15 98875894 98875926 -4619048 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1 1339 353 233 27 0 chr15 98875944 98876017 -4618957 - RSINE1 SINE B4 -35 130 56 1 1339 468 0 0 0 chr15 98876042 98876094 -4618880 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 1339 261 0 0 0 chr15 98876101 98876130 -4618844 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1339 387 246 72 0 chr15 98876255 98876361 -4618613 + B1F SINE Alu 1 120 0 1 1339 342 115 0 0 chr15 98876390 98876442 -4618532 + (T)n Simple_repeat Simple_repeat 1 52 0 1 1339 1011 80 73 0 chr15 98876442 98876579 -4618395 - B1_Mus2 SINE Alu 0 147 1 1 1339 335 73 348 18 chr15 98876595 98876707 -4618267 - B2_Mm2 SINE B2 0 195 47 1 1339 1258 97 17 0 chr15 98876739 98876914 -4618060 - B2_Mm1t SINE B2 -14 179 2 1 1339 1739 11 0 0 chr15 98877009 98877200 -4617774 - B2_Mm1a SINE B2 -1 192 2 1 1339 342 0 0 0 chr15 98877492 98877530 -4617444 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1339 182 316 50 12 chr15 98877589 98877669 -4617305 + MIR3 SINE MIR 106 188 -20 1 1339 414 0 0 0 chr15 98877939 98877985 -4616989 + (GGGA)n Simple_repeat Simple_repeat 3 48 0 1 1339 612 233 65 0 chr15 98877985 98878126 -4616848 + ID_B1 SINE B4 78 223 -1 1 1339 414 0 0 0 chr15 98878182 98878228 -4616746 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1339 306 315 14 0 chr15 98878378 98878451 -4616523 - PB1D10 SINE Alu -43 74 1 1 1339 366 23 0 0 chr15 98878660 98878703 -4616271 + (TC)n Simple_repeat Simple_repeat 1 43 0 1 1339 839 194 5 16 chr15 98878714 98878903 -4616071 + Lx4A LINE L1 6871 7057 -1 1 1339 311 213 161 129 chr15 98878933 98879057 -4615917 - B1_Mur1 SINE Alu -13 136 9 1 1339 762 0 31 0 chr15 98879143 98879241 -4615733 + (TCC)n Simple_repeat Simple_repeat 3 103 0 1 1339 333 33 31 47 chr15 98879339 98879403 -4615571 + (TTTTG)n Simple_repeat Simple_repeat 4 66 0 1 1339 1229 62 0 0 chr15 98879406 98879552 -4615422 - B1_Mus2 SINE Alu 0 147 2 1 1339 701 245 124 46 chr15 98879577 98879930 -4615044 - RLTR12B LTR ERVK -179 348 1 1 1339 190 328 16 0 chr15 98880302 98880363 -4614611 + MIR SINE MIR 74 135 -73 1 1339 1042 199 34 5 chr15 98880386 98880593 -4614381 - B3 SINE B2 0 216 4 1 1339 229 265 123 68 chr15 98881199 98881345 -4613629 + LTR85a LTR Gypsy? 549 702 0 1 1339 1557 53 5 5 chr15 98881532 98881723 -4613251 + B2_Mm2 SINE B2 2 192 -3 1 1339 222 349 54 45 chr15 98882131 98882242 -4612732 - MIR SINE MIR -35 227 116 1 1339 3149 51 15 12 chr15 98882249 98882648 -4612326 + MTB LTR MaLR 1 400 0 1 1339 225 0 0 0 chr15 98882834 98882859 -4612115 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1339 731 197 7 21 chr15 98883046 98883191 -4611783 + URR1A DNA MER1_type 80 222 -4 1 1339 369 0 0 0 chr15 98887122 98887163 -4607811 + (TTAA)n Simple_repeat Simple_repeat 4 44 0 1 1339 22 0 0 0 chr15 98887610 98887632 -4607342 + GC_rich Low_complexity Low_complexity 1 22 0 1 1339 316 247 81 12 chr15 98888456 98888542 -4606432 - RSINE1 SINE B4 -59 106 15 1 1339 977 142 0 7 chr15 98888570 98888719 -4606255 + B1_Mus1 SINE Alu 1 148 0 1 1339 599 242 53 42 chr15 98888726 98888916 -4606058 + B2_Mm2 SINE B2 4 195 0 1 1339 367 283 0 57 chr15 98889527 98889632 -4605342 - PB1D10 SINE Alu -13 104 6 1 1339 329 238 12 48 chr15 98889722 98889806 -4605168 + B1_Mur4 SINE Alu 2 82 -68 1 1339 1863 170 0 9 chr15 98889805 98890125 -4604849 + MTC LTR MaLR 104 420 -1 1 1339 661 119 0 0 chr15 98890131 98890232 -4604742 - B1_Mus2 SINE Alu -21 126 26 1 1339 473 343 15 7 chr15 98890243 98890378 -4604596 - B1F1 SINE Alu -6 143 8 1 1339 482 284 67 76 chr15 98890469 98890679 -4604295 - RMER2 LTR ERV1 -26 541 334 1 1339 727 60 436 0 chr15 98890754 98890887 -4604087 - B2_Mm2 SINE B2 -4 191 1 1 1339 906 282 55 8 chr15 98891283 98891537 -4603437 - RMER15 LTR ERVL -24 551 286 1 1339 324 0 0 0 chr15 98891642 98891678 -4603296 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 1339 1121 124 0 31 chr15 98891678 98891861 -4603113 - B2_Mm2 SINE B2 -17 178 2 1 1339 1193 88 65 5 chr15 98891909 98892093 -4602881 - B2_Mm2 SINE B2 0 195 1 1 1339 1199 47 0 0 chr15 98892119 98892267 -4602707 + B1_Mus1 SINE Alu 1 148 0 1 1339 616 173 76 30 chr15 98892300 98892431 -4602543 - B1_Mur4 SINE Alu -13 137 1 1 1339 452 18 18 0 chr15 98892431 98892488 -4602486 + (TTCC)n Simple_repeat Simple_repeat 4 61 0 1 1339 264 290 129 8 chr15 98892566 98892698 -4602276 + B1F1 SINE Alu 1 148 -1 1 1339 957 123 0 17 chr15 98892724 98892799 -4602175 + (GAA)n Simple_repeat Simple_repeat 2 75 0 1 1339 1325 62 0 11 chr15 98892799 98892980 -4601994 + (GGAGAA)n Simple_repeat Simple_repeat 2 180 0 1 1339 957 123 0 17 chr15 98892980 98893077 -4601897 + (GAA)n Simple_repeat Simple_repeat 1 96 0 1 1339 536 195 72 56 chr15 98893166 98893291 -4601683 - B1_Mus2 SINE Alu 0 147 21 1 1339 423 353 12 44 chr15 98893294 98893454 -4601520 + RSINE1 SINE B4 11 165 0 1 1339 1604 21 0 16 chr15 98893583 98893777 -4601197 - B2_Mm1a SINE B2 -2 191 1 1 1339 343 194 42 0 chr15 98894183 98894255 -4600719 + B3A SINE B2 1 75 -123 1 1339 263 263 176 29 chr15 98894343 98894361 -4600613 - PB1D9 SINE Alu 0 120 97 1 1339 865 181 0 7 chr15 98894361 98894511 -4600463 - B1_Mur3 SINE Alu 0 149 1 1 1339 277 226 123 25 chr15 98894511 98894594 -4600380 - B1_Mus2 SINE Alu -24 96 4 1 1339 436 286 37 49 chr15 98894625 98894787 -4600187 - B3 SINE B2 -27 189 30 1 1339 501 189 0 0 chr15 98894781 98894876 -4600098 + PB1D9 SINE Alu 8 102 -18 1 1339 487 212 124 24 chr15 98894903 98895072 -4599902 + L1MA6 LINE L1 6115 6300 0 1 1339 435 297 24 42 chr15 98895074 98895239 -4599735 + RSINE1 SINE B4 3 164 -1 1 1339 298 292 56 0 chr15 98895275 98895347 -4599627 + RSINE1 SINE B4 2 77 -88 1 1339 33 43 0 0 chr15 98895538 98895585 -4599389 + AT_rich Low_complexity Low_complexity 1 47 0 1 1339 699 238 0 27 chr15 98895585 98895732 -4599242 - RSINE1 SINE B4 -3 162 20 1 1339 948 234 108 25 chr15 98895736 98896060 -4598914 - ORR1E LTR MaLR -4 355 5 1 1339 722 169 164 6 chr15 98896162 98896418 -4598556 + BGLII_B LTR ERVK 1 276 -416 1 1339 279 0 0 0 chr15 98896430 98896461 -4598513 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1339 1157 54 0 0 chr15 98896461 98896608 -4598366 - B1_Mus2 SINE Alu 0 147 1 1 1339 940 76 229 0 chr15 98896636 98896793 -4598181 - B2_Mm2 SINE B2 -1 194 2 1 1339 180 0 0 0 chr15 98896979 98896999 -4597975 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 1339 266 70 23 0 chr15 98897005 98897048 -4597926 - B1_Mus2 SINE Alu -1 146 103 1 1339 657 38 0 0 chr15 98897266 98897346 -4597628 + (GAAA)n Simple_repeat Simple_repeat 3 82 0 1 1339 871 62 5 73 chr15 98897346 98897538 -4597436 + (GGGAA)n Simple_repeat Simple_repeat 2 180 0 1 1339 430 315 26 73 chr15 98897542 98897775 -4597199 + ID_B1 SINE B4 3 224 0 1 1339 321 26 0 0 chr15 98897785 98897823 -4597151 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1339 308 136 0 78 chr15 98897825 98897889 -4597085 + B3 SINE B2 4 62 -154 1 1339 282 83 0 0 chr15 98897898 98897946 -4597028 + B3 SINE B2 169 216 0 1 1339 1173 34 0 20 chr15 98898165 98898315 -4596659 + B1_Mm SINE Alu 1 147 0 1 1339 207 0 0 0 chr15 98898315 98898338 -4596636 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1339 716 204 13 13 chr15 98898349 98898498 -4596476 + B1_Mur2 SINE Alu 1 149 0 1 1339 23 33 0 0 chr15 98898559 98898589 -4596385 + AT_rich Low_complexity Low_complexity 1 30 0 1 1339 850 122 0 54 chr15 98898608 98898756 -4596218 + B2_Mm2 SINE B2 1 140 -55 1 1339 555 81 0 0 chr15 98898890 98898976 -4595998 + (TG)n Simple_repeat Simple_repeat 2 87 0 1 1339 390 212 24 0 chr15 98898985 98899059 -4595915 - RLTR28 LTR ERVL -11 513 438 1 1339 1065 72 0 0 chr15 98899059 98899198 -4595776 + B2_Mm2 SINE B2 1 139 -56 1 1339 2204 132 33 42 chr15 98899192 98899620 -4595354 - RLTR28 LTR ERVL -100 424 1 1 1339 300 309 29 96 chr15 98899648 98899713 -4595261 - B4 SINE B4 -6 286 226 1 1339 570 270 66 10 chr15 98899713 98899911 -4595063 - B3 SINE B2 -3 213 5 1 1339 300 309 29 96 chr15 98899911 98899981 -4594993 - B4 SINE B4 -67 225 160 1 1339 1350 125 1 21 chr15 98900018 98900256 -4594718 + BGLII_B LTR ERVK 192 441 0 1 1339 731 219 12 0 chr15 98900256 98900417 -4594557 - B4 SINE B4 -129 163 1 1 1339 1133 116 131 0 chr15 98900629 98900828 -4594146 + URR1A DNA MER1_type 2 226 0 1 1339 972 88 0 104 chr15 98900956 98901054 -4593920 - B1_Mm SINE Alu 0 147 65 1 1339 1598 26 0 0 chr15 98901054 98901246 -4593728 + B2_Mm1a SINE B2 2 193 0 1 1339 972 88 0 104 chr15 98901246 98901311 -4593663 - B1_Mm SINE Alu -83 64 1 1 1339 249 33 0 0 chr15 98901397 98901427 -4593547 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1339 506 250 114 17 chr15 98901566 98901741 -4593233 - RMER5 LTR ERV1 0 534 343 1 1339 655 250 0 13 chr15 98901736 98901886 -4593088 - B1_Mur1 SINE Alu 0 149 2 1 1339 479 261 144 132 chr15 98901888 98901915 -4593059 - RMER5 LTR ERV1 -178 356 331 1 1339 601 236 64 146 chr15 98901915 98901956 -4593018 + B3 SINE B2 1 40 -176 1 1339 1123 62 7 0 chr15 98901956 98902102 -4592872 + B1_Mus1 SINE Alu 2 148 0 1 1339 601 236 64 146 chr15 98902102 98902262 -4592712 + B3 SINE B2 41 184 -32 1 1339 396 103 0 0 chr15 98902262 98902320 -4592654 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1339 601 236 64 146 chr15 98902320 98902350 -4592624 + B3 SINE B2 185 214 -2 1 1339 479 261 144 132 chr15 98902350 98902546 -4592428 - RMER5 LTR ERV1 -204 330 104 1 1339 987 134 46 41 chr15 98902546 98902740 -4592234 - B2_Mm2 SINE B2 0 195 1 1 1339 479 261 144 132 chr15 98902740 98902802 -4592172 - RMER5 LTR ERV1 -431 103 54 1 1339 812 137 280 0 chr15 98902802 98902970 -4592004 - B3 SINE B2 -1 215 1 1 1339 479 261 144 132 chr15 98902970 98903022 -4591952 - RMER5 LTR ERV1 -481 53 13 1 1339 2574 178 8 15 chr15 98903164 98903636 -4591338 + Lx7 LINE L1 6949 7417 -279 1 1339 1080 82 0 0 chr15 98903689 98903836 -4591138 + B1_Mus2 SINE Alu 1 147 0 1 1339 988 141 20 3 chr15 98903845 98904013 -4590961 + B2_Mm2 SINE B2 27 193 -23 1 1339 1312 60 16 5 chr15 98904013 98904198 -4590776 + B2_Mm1a SINE B2 1 187 -6 1 1339 423 276 58 84 chr15 98904198 98904219 -4590755 + B3 SINE B2 194 211 -5 1 1339 1319 70 32 11 chr15 98904280 98904469 -4590505 + B2_Mm2 SINE B2 2 194 -1 1 1339 409 227 120 8 chr15 98906378 98906511 -4588463 + B1_Mur1 SINE Alu 2 149 0 1 1339 26 0 0 27 chr15 98906625 98906643 -4588331 + AT_rich Low_complexity Low_complexity 1 18 0 1 1339 1527 28 0 0 chr15 98906643 98906823 -4588151 - B2_Mm1a SINE B2 -12 181 2 1 1339 26 0 0 27 chr15 98906823 98906841 -4588133 + AT_rich Low_complexity Low_complexity 1 18 0 1 1339 1171 48 0 0 chr15 98906848 98906995 -4587979 - B1_Mus2 SINE Alu 0 147 1 1 1339 838 226 15 6 chr15 98907001 98907187 -4587787 - B3 SINE B2 -6 192 1 1 1339 562 241 58 76 chr15 98907210 98907381 -4587593 - B3A SINE B2 -30 168 1 1 1339 387 258 78 8 chr15 98907504 98907633 -4587341 - ID_B1 SINE B4 -6 218 81 1 1339 252 283 149 51 chr15 98908501 98908676 -4586298 + MIRb SINE MIR 56 247 -21 1 1339 369 0 0 0 chr15 98908910 98908951 -4586023 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1339 927 124 0 0 chr15 98909661 98909806 -4585168 + (TG)n Simple_repeat Simple_repeat 2 146 0 1 1339 350 188 222 0 chr15 98909975 98910092 -4584882 + B1F SINE Alu 1 143 -6 1 1339 504 0 0 0 chr15 98910098 98910154 -4584820 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1339 1057 95 0 26 chr15 98910236 98910387 -4584587 + B1_Mus2 SINE Alu 1 147 0 1 1339 251 269 30 0 chr15 98910392 98910459 -4584515 + B3A SINE B2 95 163 -35 1 1339 1129 48 0 27 chr15 98911876 98912025 -4582949 + B1_Mus1 SINE Alu 2 146 -2 1 1339 237 299 0 144 chr15 98912076 98912166 -4582808 - ID_B1 SINE B4 -69 155 79 1 1339 385 206 41 0 chr15 98914104 98914201 -4580773 + PB1 SINE Alu 20 120 -7 1 1339 180 0 0 0 chr15 98914904 98914924 -4580050 + (TC)n Simple_repeat Simple_repeat 2 21 0 1 1339 210 71 0 0 chr15 98915374 98915402 -4579572 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1339 968 137 141 5 chr15 98915499 98915697 -4579277 + URR1A DNA MER1_type 2 226 0 1 1339 314 291 93 25 chr15 98915729 98915891 -4579083 + MIR SINE MIR 90 262 0 1 1339 256 48 23 23 chr15 98919397 98919440 -4575534 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 1339 195 42 0 0 chr15 98919477 98919501 -4575473 + (CAGAGA)n Simple_repeat Simple_repeat 1 24 0 1 1339 210 128 0 0 chr15 98919536 98919575 -4575399 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 1339 495 14 42 0 chr15 98920528 98920600 -4574374 + (CTGGGG)n Simple_repeat Simple_repeat 2 76 0 1 1339 414 0 0 0 chr15 98921105 98921151 -4573823 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1339 288 0 0 0 chr15 98921642 98921674 -4573300 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 1339 23 0 0 0 chr15 98922314 98922337 -4572637 + AT_rich Low_complexity Low_complexity 1 23 0 1 1339 192 40 0 0 chr15 98922339 98922364 -4572610 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1 1339 1115 42 0 0 chr15 98922365 98922509 -4572465 - B2_Mm2 SINE B2 -50 145 2 1 1339 718 84 340 7 chr15 98922513 98922657 -4572317 - B2_Mm2 SINE B2 -3 192 1 1 1339 186 367 26 52 chr15 98922667 98922822 -4572152 - MIRb SINE MIR -19 249 99 1 1339 1345 84 5 0 chr15 98924679 98924870 -4570104 - B2_Mm1t SINE B2 0 193 2 1 1339 1019 70 139 13 chr15 98924871 98925029 -4569945 - B2_Mm2 SINE B2 -14 181 4 1 1339 729 152 0 23 chr15 98926231 98926245 -4568729 - B1_Mus1 SINE Alu 0 148 137 1 1339 180 77 0 0 chr15 98926245 98926271 -4568703 + (TTG)n Simple_repeat Simple_repeat 1 26 0 1 1339 729 152 0 23 chr15 98926271 98926384 -4568590 - B1_Mus1 SINE Alu -12 136 24 1 1339 230 164 64 15 chr15 98928996 98929062 -4565912 - MIRc SINE MIR -54 154 81 1 1339 522 0 0 0 chr15 98930304 98930362 -4564612 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1339 414 256 137 46 chr15 98930526 98930679 -4564295 - B3 SINE B2 -5 211 33 1 1339 828 86 255 7 chr15 98930765 98930918 -4564056 + B2_Mm2 SINE B2 1 191 -4 1 1339 361 256 107 41 chr15 98930931 98931053 -4563921 + ID_B1 SINE B4 86 215 -9 1 1339 30 27 0 0 chr15 98931057 98931094 -4563880 + AT_rich Low_complexity Low_complexity 1 37 0 1 1339 1144 48 7 0 chr15 98932433 98932579 -4562395 - B1_Mus2 SINE Alu 0 147 1 1 1339 1014 71 28 0 chr15 98932579 98932720 -4562254 - B2_Mm2 SINE B2 -48 147 3 1 1339 183 80 0 0 chr15 98932722 98932747 -4562227 + (TTC)n Simple_repeat Simple_repeat 3 27 0 1 1339 311 272 39 42 chr15 98932747 98932884 -4562090 - B1F2 SINE Alu 0 149 9 1 1339 228 149 0 0 chr15 98932911 98932958 -4562016 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 1 1339 1073 84 7 0 chr15 98932968 98933110 -4561864 - B1_Mm SINE Alu -1 146 4 1 1339 240 353 109 0 chr15 98933136 98933288 -4561686 - L1ME3A LINE L1 -224 5949 5784 1 1339 4350 63 3 15 chr15 98933288 98933871 -4561103 - L1_Mus3 LINE L1 -6 6632 6057 1 1339 240 353 109 0 chr15 98933871 98933919 -4561055 - L1ME3A LINE L1 -390 5783 5728 1 1339 1512 52 0 5 chr15 98933924 98934118 -4560856 - B2_Mm2 SINE B2 -2 193 1 1 1339 1498 47 0 5 chr15 98934123 98934314 -4560660 - B2_Mm2 SINE B2 -5 190 1 1 1339 238 320 0 48 chr15 98934510 98934615 -4560359 - BC1_Mm scRNA scRNA -50 102 3 1 1339 27 0 0 0 chr15 98935128 98935155 -4559819 + AT_rich Low_complexity Low_complexity 1 27 0 1 1339 534 176 7 30 chr15 98935381 98935394 -4559580 + polypurine Low_complexity Low_complexity 3 15 0 1 1339 1123 48 7 14 chr15 98935394 98935542 -4559432 + B1_Mus2 SINE Alu 1 147 0 1 1339 534 176 7 30 chr15 98935542 98935663 -4559311 + GA-rich Low_complexity Low_complexity 16 134 0 1 1339 922 255 66 56 chr15 98935693 98936013 -4558961 + MTE2b LTR MaLR 57 379 0 1 1339 1362 45 67 0 chr15 98936236 98936415 -4558559 - B2_Mm1a SINE B2 -1 192 2 1 1339 1050 97 14 0 chr15 98936417 98936561 -4558413 - B1_Mus1 SINE Alu -1 147 2 1 1339 871 127 118 24 chr15 98936591 98936760 -4558214 - B2_Mm2 SINE B2 -9 186 2 1 1339 200 34 0 33 chr15 98936915 98936945 -4558029 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1339 3003 90 21 41 chr15 98936947 98937432 -4557542 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1339 357 237 13 45 chr15 98937439 98937542 -4557432 - B1F SINE Alu -1 148 42 1 1339 217 132 0 0 chr15 98937548 98937586 -4557388 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 1339 333 0 0 0 chr15 98937586 98937623 -4557351 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1339 1450 49 27 0 chr15 98938174 98938357 -4556617 - B2_Mm1a SINE B2 -5 188 1 1 1339 812 313 58 3 chr15 98938368 98938660 -4556314 + LTR48B LTR ERV1 303 610 -34 1 1339 242 35 16 95 chr15 98938799 98938809 -4556165 + (CAAAAA)n Simple_repeat Simple_repeat 2 10 0 1 1339 1149 61 0 0 chr15 98938809 98938956 -4556018 + B1_Mm SINE Alu 1 147 0 1 1339 242 35 16 95 chr15 98938956 98939008 -4555966 + (CAAAAA)n Simple_repeat Simple_repeat 5 53 0 1 1339 594 133 208 0 chr15 98939019 98939139 -4555835 + B1_Mus1 SINE Alu 3 147 -1 1 1339 630 261 46 0 chr15 98939196 98939349 -4555625 + B3 SINE B2 1 160 -56 1 1339 600 53 0 0 chr15 98939349 98939425 -4555549 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 1 1339 458 187 262 0 chr15 98939425 98939532 -4555442 - B1_Mus1 SINE Alu -10 138 4 1 1339 486 0 0 0 chr15 98939684 98939738 -4555236 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1339 608 245 26 39 chr15 98939813 98939966 -4555008 - RLTR20C LTR ERVK 0 578 428 1 1339 908 203 118 45 chr15 98939965 98940254 -4554720 - RLTR20C LTR ERVK -224 310 1 1 1339 414 242 53 23 chr15 98940285 98940416 -4554558 - B1F1 SINE Alu -10 139 5 1 1339 570 239 0 0 chr15 98940475 98940592 -4554382 - B1F SINE Alu -27 122 6 1 1339 328 331 39 0 chr15 98940492 98940619 -4554355 - B4A SINE B4 -98 194 63 1 1339 328 221 36 71 chr15 98941191 98941303 -4553671 + PB1D9 SINE Alu 1 108 -12 1 1339 231 299 124 0 chr15 98941324 98941421 -4553553 - PB1D10 SINE Alu -8 109 1 1 1339 244 306 70 70 chr15 98941365 98941431 -4553543 + MT2B2 LTR ERVL 107 235 -349 1 1339 272 206 51 76 chr15 98941431 98941510 -4553464 + RLTR25A LTR ERVK 497 573 -530 1 1339 768 29 19 19 chr15 98941453 98941560 -4553414 + B1_Mur3 SINE Alu 43 149 0 1 1339 244 306 70 70 chr15 98941510 98941523 -4553451 + MT2B2 LTR ERVL 236 264 -320 1 1339 410 259 42 33 chr15 98941598 98941718 -4553256 - RSINE1 SINE B4 -2 163 43 1 1339 232 264 0 40 chr15 98941776 98941851 -4553123 + ID4 SINE ID 1 72 -11 1 1339 1112 212 9 13 chr15 98941864 98942089 -4552885 + URR1B DNA MER1_type 1 224 -1 1 1339 335 290 83 18 chr15 98942152 98942261 -4552713 - PB1D10 SINE Alu 0 117 2 1 1339 308 278 20 30 chr15 98942284 98942384 -4552590 - ID_B1 SINE B4 -5 219 121 1 1339 211 317 45 98 chr15 98942384 98942415 -4552559 - B1F1 SINE Alu -3 144 21 1 1339 650 180 24 24 chr15 98942461 98942586 -4552388 + B1_Mur2 SINE Alu 25 149 0 1 1339 237 237 167 26 chr15 98942905 98942983 -4551991 - ID_B1 SINE B4 -55 169 81 1 1339 625 236 28 0 chr15 98942989 98943133 -4551841 - B1F SINE Alu -1 148 1 1 1339 402 194 96 52 chr15 98943133 98943269 -4551705 - L1MB5 LINE L1 -232 5942 5801 1 1339 420 217 16 57 chr15 98943389 98943511 -4551463 - L1M5 LINE L1 -442 5682 5566 1 1339 183 271 35 70 chr15 98943513 98943628 -4551346 - L3 LINE CR1 -498 3991 3881 1 1339 217 289 0 0 chr15 98943628 98943673 -4551301 + polypyrimidine Low_complexity Low_complexity 1 45 0 1 1339 291 71 0 0 chr15 98943673 98943715 -4551259 + (T)n Simple_repeat Simple_repeat 1 42 0 1 1339 253 172 17 33 chr15 98943752 98943812 -4551162 - B1F SINE Alu -1 148 90 1 1339 959 216 13 58 chr15 98943973 98944199 -4550775 - B3 SINE B2 0 216 1 1 1339 555 114 271 1 chr15 98944244 98944400 -4550574 + B2_Mm2 SINE B2 1 199 -17 1 1339 221 0 35 0 chr15 98944421 98944450 -4550524 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1 1339 1308 58 81 0 chr15 98944451 98944623 -4550351 - B2_Mm1t SINE B2 -7 186 1 1 1339 734 176 250 28 chr15 98944763 98944939 -4550035 - B3 SINE B2 0 216 2 1 1339 297 0 0 0 chr15 98945020 98945053 -4549921 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 1339 519 17 0 0 chr15 98945053 98945112 -4549862 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 1339 270 268 112 10 chr15 98945233 98945331 -4549643 + RSINE1 SINE B4 16 123 -42 1 1339 1270 34 0 0 chr15 98945826 98945973 -4549001 + B1_Mus2 SINE Alu 1 147 0 1 1339 703 231 37 75 chr15 98945987 98946174 -4548800 - B3A SINE B2 -17 181 2 1 1339 920 132 107 62 chr15 98946189 98946367 -4548607 + B3 SINE B2 1 186 -9 1 1339 1328 85 0 41 chr15 98946493 98946689 -4548285 + B2_Mm2 SINE B2 1 188 -7 1 1339 804 131 73 44 chr15 98946690 98946826 -4548148 + B1_Mus2 SINE Alu 7 146 -1 1 1339 362 375 62 0 chr15 98947439 98947599 -4547375 + MIRc SINE MIR 74 243 -25 1 1339 366 330 31 78 chr15 98947809 98947937 -4547037 - RSINE1 SINE B4 0 165 44 1 1339 1463 45 23 0 chr15 98947951 98948128 -4546846 - B2_Mm2 SINE B2 -14 181 1 1 1339 1111 59 0 0 chr15 98948242 98948378 -4546596 + B1_Mus1 SINE Alu 3 138 -10 1 1339 222 37 0 0 chr15 98948378 98948405 -4546569 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1339 180 0 0 0 chr15 98948405 98948425 -4546549 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1 1339 308 200 0 0 chr15 98948588 98948659 -4546315 - ID4_ SINE ID -49 103 33 1 1339 412 298 26 0 chr15 98948684 98948798 -4546176 - PB1D10 SINE Alu 0 117 1 1 1339 844 212 11 45 chr15 98948868 98949046 -4545928 + B3 SINE B2 45 216 0 1 1339 252 328 0 0 chr15 98949063 98949127 -4545847 + PB1D9 SINE Alu 1 64 -56 1 1339 252 86 0 0 chr15 98949138 98949173 -4545801 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1339 883 115 129 0 chr15 98949174 98949313 -4545661 - B2_Mm2 SINE B2 -37 158 2 1 1339 913 288 34 4 chr15 98949374 98949581 -4545393 + B4 SINE B4 3 214 -78 1 1339 4224 79 0 0 chr15 98949581 98950125 -4544849 + L1Md_T LINE L1 6039 6582 0 1 1339 913 288 34 4 chr15 98950125 98950151 -4544823 + B4 SINE B4 215 243 -49 1 1339 1084 97 0 0 chr15 98950161 98950306 -4544668 + B1_Mus1 SINE Alu 1 145 -3 1 1339 396 40 0 0 chr15 98950306 98950356 -4544618 + (CAA)n Simple_repeat Simple_repeat 2 51 0 1 1339 1067 164 46 26 chr15 98950370 98950564 -4544410 + B3 SINE B2 8 205 -11 1 1339 786 117 0 0 chr15 98950564 98950684 -4544290 + (GGA)n Simple_repeat Simple_repeat 2 121 0 1 1339 4652 99 25 104 chr15 98950684 98951562 -4543412 + RMER17D2 LTR ERVK 1 809 0 1 1339 449 193 0 16 chr15 98951562 98951683 -4543291 + GA-rich Low_complexity Low_complexity 2 120 0 1 1339 525 16 0 0 chr15 98951750 98951812 -4543162 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 1339 454 188 25 0 chr15 98951923 98952003 -4542971 - ID2 SINE ID 0 83 2 1 1339 218 319 0 0 chr15 98952003 98952075 -4542899 - PB1D10 SINE Alu -3 114 43 1 1339 580 171 200 25 chr15 98952130 98952250 -4542724 - B1_Mur1 SINE Alu -8 141 1 1 1339 885 139 46 72 chr15 98952258 98952452 -4542522 - B2_Mm2 SINE B2 -6 189 1 1 1339 201 39 0 0 chr15 98952583 98952609 -4542365 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1339 627 245 7 70 chr15 98952659 98952828 -4542146 - B4A SINE B4 -137 155 1 1 1339 1265 41 0 0 chr15 98953030 98953177 -4541797 + B1_Mm SINE Alu 1 147 0 1 1339 186 43 0 0 chr15 98953499 98953522 -4541452 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 1339 1219 56 0 0 chr15 98953605 98953749 -4541225 + B1_Mus2 SINE Alu 4 147 0 1 1339 538 226 22 36 chr15 98953756 98953894 -4541080 - B1F1 SINE Alu -13 136 1 1 1339 443 296 69 125 chr15 98953904 98954136 -4540838 - B4A SINE B4 -72 220 2 1 1339 1285 78 28 11 chr15 98954219 98954401 -4540573 - B2_Mm2 SINE B2 -3 192 8 1 1339 801 129 8 8 chr15 98954425 98954550 -4540424 - B1_Mur3 SINE Alu -8 141 17 1 1339 771 216 30 55 chr15 98954559 98954760 -4540214 - B3A SINE B2 0 198 3 1 1339 305 297 91 30 chr15 98954773 98954905 -4540069 - B1F1 SINE Alu -9 140 1 1 1339 478 223 96 0 chr15 98954964 98955058 -4539916 - B1_Mur2 SINE Alu -44 105 3 1 1339 1342 86 32 0 chr15 98955090 98955276 -4539698 + B2_Mm2 SINE B2 1 192 -3 1 1339 477 245 10 0 chr15 98955287 98955389 -4539585 - PB1D10 SINE Alu -13 104 2 1 1339 502 264 84 14 chr15 98955445 98955587 -4539387 + B3 SINE B2 61 212 -4 1 1339 365 230 5 59 chr15 98955674 98955786 -4539188 + PB1D10 SINE Alu 14 117 0 1 1339 336 146 36 0 chr15 98956048 98956103 -4538871 + RMER30 DNA MER1_type 1 57 -145 1 1339 216 250 12 12 chr15 98956902 98956983 -4537991 + (CG)n Simple_repeat Simple_repeat 2 82 0 1 1339 210 259 24 65 chr15 98957106 98957230 -4537744 + G-rich Low_complexity Low_complexity 3 121 0 1 1339 23 0 0 0 chr15 98957960 98957983 -4536991 + AT_rich Low_complexity Low_complexity 1 23 0 1 1339 413 270 34 59 chr15 98958474 98958592 -4536382 - B1F SINE Alu -19 130 16 1 1339 925 167 0 45 chr15 98958884 98959041 -4535933 + B1_Mur4 SINE Alu 1 150 0 1 1339 670 245 67 47 chr15 98959076 98959269 -4535705 - B3A SINE B2 -1 197 1 1 167 350 224 61 39 chr15 98959269 98959375 -4535599 - B1F SINE Alu -43 104 3 1 1340 397 296 7 57 chr15 98959411 98959551 -4535423 + ID_B1 SINE B4 81 213 -11 1 1340 192 208 18 54 chr15 98959622 98959678 -4535296 - MIRb SINE MIR -35 233 180 1 1340 924 169 0 0 chr15 98959725 98959873 -4535101 + B1_Mus1 SINE Alu 1 148 0 1 1340 281 287 106 76 chr15 98959987 98960119 -4534855 - ID_B1 SINE B4 -71 153 18 1 1340 379 200 99 10 chr15 98960156 98960257 -4534717 - B1_Mur3 SINE Alu -1 148 39 1 1340 231 274 11 87 chr15 98960301 98960393 -4534581 - B1F SINE Alu -21 99 15 1 1340 246 105 0 0 chr15 98960421 98960459 -4534515 + (CGTG)n Simple_repeat Simple_repeat 1 38 0 1 1340 201 39 0 0 chr15 98960459 98960485 -4534489 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 1 1340 269 189 132 0 chr15 98960516 98960569 -4534405 - B3A SINE B2 -82 116 57 1 1340 22 0 0 0 chr15 98961522 98961544 -4533430 + GC_rich Low_complexity Low_complexity 1 22 0 1 1340 204 97 0 0 chr15 98961642 98961673 -4533301 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1 1340 261 188 2 0 chr15 98961685 98961740 -4533234 + B1_Mur1 SINE Alu 64 148 -1 1 1340 401 226 93 83 chr15 98961790 98961983 -4532991 - L1MB3 LINE L1 -35 6148 5954 1 1340 267 133 0 0 chr15 98962036 98962081 -4532893 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1340 293 282 43 2 chr15 98962116 98962207 -4532767 - PB1 SINE Alu -45 82 5 1 1340 245 234 77 15 chr15 98962221 98962286 -4532688 - L1MB3 LINE L1 -408 5775 5707 1 1340 289 313 26 9 chr15 98962328 98962444 -4532530 + PB1D7 SINE Alu 1 118 -2 1 1340 451 286 27 41 chr15 98962493 98962639 -4532335 - ID_B1 SINE B4 0 224 81 1 1340 289 250 0 73 chr15 98962637 98962719 -4532255 - B1F SINE Alu -2 147 72 1 1340 697 102 154 15 chr15 98962725 98962855 -4532119 - B1_Mur1 SINE Alu -1 148 1 1 1340 317 249 106 83 chr15 98962855 98962939 -4532035 - MT2B LTR ERVL -433 168 81 1 1340 362 261 183 71 chr15 98962855 98962889 -4532085 - B4 SINE B4 -62 225 43 1 1340 25 65 0 0 chr15 98962963 98963009 -4531965 + AT_rich Low_complexity Low_complexity 1 46 0 1 1340 181 75 24 24 chr15 98964028 98964069 -4530905 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1 1340 1023 84 0 0 chr15 98965019 98965162 -4529812 + (TG)n Simple_repeat Simple_repeat 1 143 0 1 1340 31 0 0 0 chr15 98965567 98965598 -4529376 + AT_rich Low_complexity Low_complexity 1 31 0 1 1340 425 178 120 22 chr15 98965598 98965690 -4529284 - B1_Mur1 SINE Alu -4 145 45 1 1340 375 164 15 0 chr15 98965691 98965758 -4529216 - B3 SINE B2 -148 68 1 1 1340 244 259 0 0 chr15 98965784 98965838 -4529136 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1340 345 218 0 0 chr15 98965844 98965923 -4529051 + T-rich Low_complexity Low_complexity 23 101 0 1 1340 1178 61 0 7 chr15 98965923 98966071 -4528903 - B1_Mus2 SINE Alu 0 147 1 1 1340 345 218 0 0 chr15 98966071 98966092 -4528882 + T-rich Low_complexity Low_complexity 2 22 0 1 1340 1201 41 7 0 chr15 98966529 98966675 -4528299 - B1_Mus2 SINE Alu 0 147 1 1 1340 795 203 20 0 chr15 98966675 98966823 -4528151 - B3 SINE B2 -62 154 4 1 1340 318 204 144 22 chr15 98966956 98967046 -4527928 - B1F2 SINE Alu 0 149 49 1 1340 973 236 5 5 chr15 98967033 98967233 -4527741 - B3 SINE B2 0 216 17 1 1340 821 242 16 1 chr15 98967348 98967542 -4527432 - B3A SINE B2 -13 203 10 1 1340 227 238 44 77 chr15 98967462 98967553 -4527421 - B4A SINE B4 -202 90 3 1 1340 300 250 32 54 chr15 98967556 98967649 -4527325 - L1M LINE L1 -960 5399 5309 1 1340 262 275 48 36 chr15 98967656 98967739 -4527235 - PB1 SINE Alu -3 124 41 1 1340 357 226 0 0 chr15 98968310 98968587 -4526387 + (CAGCT)n Simple_repeat Simple_repeat 1 277 0 1 1340 440 200 0 0 chr15 98969062 98969137 -4525837 + ID_B1 SINE B4 144 218 -6 1 1340 507 282 160 29 chr15 98969353 98969528 -4525446 + B3A SINE B2 1 198 0 1 1340 393 146 0 0 chr15 98969553 98969608 -4525366 + B3 SINE B2 23 77 -139 1 1340 180 0 0 0 chr15 98969666 98969686 -4525288 + (TCCG)n Simple_repeat Simple_repeat 3 22 0 1 1340 359 284 0 0 chr15 98969757 98969905 -4525069 + (CAGG)n Simple_repeat Simple_repeat 2 149 0 1 1340 254 83 0 0 chr15 98970123 98970159 -4524815 - B1F SINE Alu -87 62 27 1 1340 450 264 18 18 chr15 98970992 98971104 -4523870 - PB1D10 SINE Alu 0 117 6 1 1340 22 0 0 0 chr15 98971426 98971448 -4523526 + AT_rich Low_complexity Low_complexity 1 22 0 1 1340 374 312 69 7 chr15 98971520 98971665 -4523309 - RSINE1 SINE B4 -4 161 8 1 1340 312 294 20 40 chr15 98971686 98971835 -4523139 - B1F1 SINE Alu 0 149 4 1 1340 247 239 78 22 chr15 98971998 98972088 -4522886 + PB1D10 SINE Alu 1 98 -22 1 1340 775 212 118 31 chr15 98972286 98972390 -4522584 + B3 SINE B2 1 121 -95 1 1340 1691 184 44 25 chr15 98972390 98972757 -4522217 - ORR1D1 LTR MaLR 0 374 1 1 1340 775 212 118 31 chr15 98972757 98972847 -4522127 + B3 SINE B2 122 212 -4 1 1340 345 297 134 50 chr15 98972877 98973079 -4521895 + ID_B1 SINE B4 3 221 -3 1 1340 301 225 0 90 chr15 98973101 98973179 -4521795 + B1_Mur4 SINE Alu 1 71 -79 1 1340 592 217 15 44 chr15 98973335 98973470 -4521504 + B3A SINE B2 1 131 -67 1 1340 906 207 64 29 chr15 98973606 98973810 -4521164 - B3 SINE B2 -5 211 1 1 1340 1188 55 14 0 chr15 98973932 98974077 -4520897 - B1_Mus1 SINE Alu 0 148 2 1 1340 320 265 67 19 chr15 98974086 98974190 -4520784 - PB1D9 SINE Alu -4 116 8 1 1340 384 302 21 124 chr15 98974102 98974295 -4520679 - B4 SINE B4 -117 175 3 1 1340 485 173 230 75 chr15 98974303 98974490 -4520484 - B3 SINE B2 0 216 1 1 1340 825 40 0 0 chr15 98974498 98974599 -4520375 + (TTCTC)n Simple_repeat Simple_repeat 1 101 0 1 1340 234 0 0 0 chr15 98974600 98974626 -4520348 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1340 225 0 0 0 chr15 98974644 98974669 -4520305 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 1 1340 404 239 45 18 chr15 98975096 98975207 -4519767 + PB1D9 SINE Alu 5 118 -2 1 1340 419 243 37 9 chr15 98975258 98975366 -4519608 - PB1D7 SINE Alu 0 120 10 1 1340 491 221 169 57 chr15 98975448 98975625 -4519349 + B3 SINE B2 20 216 0 1 1340 979 181 11 11 chr15 98976067 98976246 -4518728 - B3 SINE B2 -10 206 28 1 1340 1912 110 65 46 chr15 98976246 98976569 -4518405 - ORR1A4 LTR MaLR 0 329 1 1 1340 2131 165 36 186 chr15 98976569 98977215 -4517759 - ORR1A4-int LTR MaLR 0 1792 1244 1 1340 407 192 283 0 chr15 98977207 98977306 -4517668 - B1_Mm SINE Alu -20 127 1 1 1340 21 36 0 0 chr15 98977308 98977336 -4517638 + AT_rich Low_complexity Low_complexity 1 28 0 1 1340 342 0 0 0 chr15 98977436 98977474 -4517500 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1340 1296 94 39 0 chr15 98977949 98978129 -4516845 + B2_Mm2 SINE B2 1 187 -8 1 1340 831 256 28 24 chr15 98978144 98978356 -4516618 + B3 SINE B2 4 216 0 1 1340 303 258 96 59 chr15 98978430 98978566 -4516408 - L1M5 LINE L1 -2890 3256 3116 1 1340 438 108 0 0 chr15 98978566 98978631 -4516343 + (TTCC)n Simple_repeat Simple_repeat 1 65 0 1 1340 1062 97 65 0 chr15 98978631 98978785 -4516189 - B2_Mm1a SINE B2 -28 165 2 1 1340 628 233 23 10 chr15 98978794 98978962 -4516012 - B3 SINE B2 -20 175 1 1 1340 855 137 21 7 chr15 98979042 98979182 -4515792 - B1_Mur4 SINE Alu -6 144 3 1 1340 29 0 0 0 chr15 98979218 98979247 -4515727 + AT_rich Low_complexity Low_complexity 1 29 0 1 1340 632 272 174 28 chr15 98979249 98979718 -4515256 - Lx9 LINE L1 -48 7596 6931 1 1340 201 147 0 0 chr15 98980279 98980313 -4514661 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 1 1340 290 176 43 14 chr15 98980411 98980480 -4514494 + ID4_ SINE ID 1 71 -12 1 1340 252 81 0 0 chr15 98980689 98980726 -4514248 + B2_Mm2 SINE B2 2 38 -157 1 1340 970 25 0 0 chr15 98980725 98980843 -4514131 + B1_Mus2 SINE Alu 30 147 0 1 1340 258 106 0 0 chr15 98980843 98980890 -4514084 + (A)n Simple_repeat Simple_repeat 1 47 0 1 1340 200 111 67 0 chr15 98980914 98980959 -4514015 + A-rich Low_complexity Low_complexity 1 48 0 1 1340 396 0 0 0 chr15 98981883 98981927 -4513047 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1340 534 194 19 10 chr15 98981929 98982033 -4512941 - B3A SINE B2 -51 147 43 1 1340 318 225 18 9 chr15 98982034 98982146 -4512828 - Lx9 LINE L1 -2 7642 7530 1 1340 791 263 51 73 chr15 98982331 98982606 -4512368 - B4 SINE B4 -23 269 1 1 1340 188 135 0 26 chr15 98982759 98982797 -4512177 + CT-rich Low_complexity Low_complexity 2 38 0 1 1340 423 0 0 0 chr15 98983142 98983189 -4511785 + (TCCC)n Simple_repeat Simple_repeat 3 49 0 1 1340 285 262 0 24 chr15 98983191 98983273 -4511701 + CT-rich Low_complexity Low_complexity 2 81 0 1 1340 500 180 39 20 chr15 98983279 98983381 -4511593 + B4 SINE B4 107 210 -82 1 1340 491 274 22 29 chr15 98983558 98983697 -4511277 - RSINE1 SINE B4 -9 156 19 1 1340 612 97 11 11 chr15 98983726 98983820 -4511154 - B1_Mur3 SINE Alu -22 127 34 1 1340 380 247 0 0 chr15 98984206 98984283 -4510691 + ID4 SINE ID 3 79 -4 1 1340 1299 27 0 0 chr15 98984530 98984677 -4510297 + B1_Mm SINE Alu 1 147 0 1 1340 243 0 0 0 chr15 98984677 98984704 -4510270 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1340 351 231 63 10 chr15 98984730 98984873 -4510101 - L1M3 LINE L1 -493 5669 5501 1 1340 191 242 0 16 chr15 98984937 98985000 -4509974 + T-rich Low_complexity Low_complexity 3 64 0 1 1340 3514 63 48 2 chr15 98985002 98985463 -4509511 - RLTR45 LTR ERVK 0 482 1 1 1340 54050 58 24 22 chr15 98985463 98987968 -4507006 - RLTR45-int LTR ERVK 0 7244 4768 1 1340 261 0 0 0 chr15 98987968 98987997 -4506977 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1 1340 54050 58 24 22 chr15 98987997 98989835 -4505139 - RLTR45-int LTR ERVK -2477 4767 2919 1 1340 1573 21 5 16 chr15 98989835 98990026 -4504948 + B2_Mm1a SINE B2 1 189 -4 1 1340 54050 58 24 22 chr15 98990026 98992912 -4502062 - RLTR45-int LTR ERVK -4326 2918 3 1 1340 3980 48 8 2 chr15 98992912 98993391 -4501583 - RLTR45 LTR ERVK 0 482 1 1 1340 285 279 15 0 chr15 98993396 98993464 -4501510 + CT-rich Low_complexity Low_complexity 3 71 0 1 1340 770 104 96 0 chr15 98993590 98993715 -4501259 + B1_Mus1 SINE Alu 12 148 0 1 1340 823 290 172 12 chr15 98993986 98994324 -4500650 + Lx8 LINE L1 6881 7272 -201 1 1340 883 264 69 5 chr15 98994602 98994810 -4500164 - B4 SINE B4 -2 290 69 1 1340 822 266 0 0 chr15 98994810 98994964 -4500010 + B3 SINE B2 1 154 -62 1 1340 213 254 15 73 chr15 98995138 98995206 -4499768 - B4 SINE B4 -160 132 69 1 1340 321 298 10 31 chr15 98996082 98996179 -4498795 + MER5A1 DNA MER1_type 70 164 -2 1 1340 776 261 39 6 chr15 98996772 98996953 -4498021 + B3 SINE B2 20 206 -10 1 1340 1012 146 0 0 chr15 98996966 98997110 -4497864 - B1_Mur2 SINE Alu 0 149 6 1 1340 265 246 44 51 chr15 98997006 98997143 -4497831 - ORR1B1-int LTR MaLR -755 754 619 1 1340 1341 87 11 16 chr15 98997273 98997460 -4497514 + B2_Mm1t SINE B2 2 187 -6 1 1340 566 188 83 25 chr15 98997682 98997802 -4497172 + B1_Mur1 SINE Alu 2 128 -21 1 1340 472 152 76 0 chr15 98998043 98998122 -4496852 - B1_Mur4 SINE Alu -6 144 60 1 1340 369 303 124 11 chr15 98998414 98998591 -4496383 + HAL1-2a_MD LINE L1 1221 1417 -1607 1 1340 289 276 136 118 chr15 98998598 98998877 -4496097 + B4 SINE B4 1 284 -8 1 1340 346 207 387 0 chr15 98998915 98999065 -4495909 - B3 SINE B2 -8 208 1 1 1340 207 94 0 0 chr15 98999092 98999106 -4495868 + (T)n Simple_repeat Simple_repeat 1 14 0 1 1340 1649 21 21 0 chr15 98999106 98999295 -4495679 - B2_Mm1a SINE B2 0 193 1 1 1340 207 94 0 0 chr15 98999295 98999312 -4495662 + (T)n Simple_repeat Simple_repeat 1 17 0 1 1340 21 36 0 0 chr15 98999315 98999343 -4495631 + AT_rich Low_complexity Low_complexity 1 28 0 1 1340 570 175 138 17 chr15 98999364 98999480 -4495494 + B1_Mur1 SINE Alu 2 131 -18 1 1340 621 260 108 50 chr15 99002607 99002866 -4492108 + B4A SINE B4 1 274 -18 1 1340 333 259 67 22 chr15 99002984 99003021 -4491953 - L1MEe LINE L1 -4029 825 787 2 1340 1216 48 0 20 chr15 99003021 99003171 -4491803 - B1_Mus2 SINE Alu 0 147 1 3 1340 333 259 67 22 chr15 99003171 99003244 -4491730 - L1MEe LINE L1 -4068 786 713 2 1340 704 159 121 0 chr15 99003244 99003376 -4491598 - B1_Mur3 SINE Alu 0 149 2 4 1340 333 259 67 22 chr15 99003376 99003398 -4491576 - L1MEe LINE L1 -4142 712 686 2 1340 240 130 0 0 chr15 99003434 99003480 -4491494 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 1340 531 259 59 0 chr15 99003490 99003625 -4491349 - RSINE1 SINE B4 -21 144 2 6 1340 292 260 143 0 chr15 99004951 99005028 -4489946 + B3 SINE B2 11 98 -118 7 1340 456 200 644 0 chr15 99005229 99005367 -4489607 - 7SK RNA RNA -96 235 9 8 1340 360 228 103 56 chr15 99006041 99006148 -4488826 + PB1D10 SINE Alu 4 115 -2 9 1340 3414 35 5 2 chr15 99006308 99006703 -4488271 - MTA_Mm LTR MaLR 0 396 1 1 1340 684 135 0 0 chr15 99006721 99006832 -4488142 + (TCC)n Simple_repeat Simple_repeat 2 112 0 1 1340 294 188 0 19 chr15 99006840 99006911 -4488063 - B1_Mus2 SINE Alu 0 149 84 1 1340 1460 73 16 5 chr15 99007497 99007689 -4487285 - B2_Mm2 SINE B2 0 195 2 1 1340 442 264 0 18 chr15 99007767 99007904 -4487070 - ID4 SINE ID -21 131 1 1 1340 328 282 118 35 chr15 99008011 99008180 -4486794 - L1MC LINE L1 -2120 5762 5580 1 1340 294 143 0 0 chr15 99009330 99009379 -4485595 + (ATG)n Simple_repeat Simple_repeat 1 49 0 1 1340 885 202 6 17 chr15 99009614 99009795 -4485179 - B3 SINE B2 0 216 38 1 1340 666 239 0 43 chr15 99009961 99010101 -4484873 + B1_Mur2 SINE Alu 1 134 -15 1 1340 1008 229 9 18 chr15 99010151 99010369 -4484605 + B3 SINE B2 1 216 0 1 1340 252 143 0 0 chr15 99010401 99010443 -4484531 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 2 1340 1287 34 0 0 chr15 99010443 99010591 -4484383 - B1_Mus1 SINE Alu 0 148 1 2 1340 221 326 49 39 chr15 99010682 99010784 -4484190 - B2_Mm2 SINE B2 -8 187 85 2 1340 314 268 0 0 chr15 99011711 99011782 -4483192 + PB1D10 SINE Alu 13 83 -34 2 1340 606 60 0 0 chr15 99011836 99011919 -4483055 + (TG)n Simple_repeat Simple_repeat 2 84 0 2 1340 691 176 88 0 chr15 99011921 99012046 -4482928 - B1_Mur1 SINE Alu -8 141 6 2 1340 324 312 112 91 chr15 99012046 99012108 -4482866 - B4 SINE B4 -74 218 28 2 1340 189 74 0 0 chr15 99012275 99012302 -4482672 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1340 201 121 0 0 chr15 99012305 99012338 -4482636 + (CCTG)n Simple_repeat Simple_repeat 4 36 0 2 1340 359 264 127 0 chr15 99012346 99012456 -4482518 - RSINE1 SINE B4 -30 135 12 2 1340 26 0 0 0 chr15 99012583 99012609 -4482365 + AT_rich Low_complexity Low_complexity 1 26 0 3 1340 285 301 0 52 chr15 99012609 99012686 -4482288 + PB1 SINE Alu 33 105 -22 3 1340 521 277 179 5 chr15 99012720 99012916 -4482058 + B4A SINE B4 1 230 -62 3 1340 727 228 44 54 chr15 99012919 99013123 -4481851 + B3 SINE B2 5 206 -10 3 1340 1228 109 23 0 chr15 99013129 99013304 -4481670 + B2_Mm2 SINE B2 2 180 -15 3 1340 25 31 0 0 chr15 99013332 99013364 -4481610 + AT_rich Low_complexity Low_complexity 1 32 0 3 1340 747 175 145 0 chr15 99013413 99013579 -4481395 - B3 SINE B2 -25 191 2 3 1340 350 195 0 105 chr15 99013603 99013689 -4481285 + B4 SINE B4 216 292 0 3 1340 345 315 26 26 chr15 99013704 99013818 -4481156 + PB1D10 SINE Alu 2 115 -2 3 1340 204 40 0 0 chr15 99013944 99013969 -4481005 + (GGAA)n Simple_repeat Simple_repeat 1 25 0 3 1340 358 183 0 0 chr15 99013970 99014030 -4480944 + ID_B1 SINE B4 163 222 -2 3 1340 474 257 51 34 chr15 99014166 99014283 -4480691 + B1F1 SINE Alu 26 144 -5 4 1340 830 261 113 19 chr15 99014704 99015013 -4479961 - Lx6 LINE L1 -27 7433 7096 4 1340 276 109 152 0 chr15 99015169 99015215 -4479759 - ID4 SINE ID -13 70 18 4 1340 453 283 0 0 chr15 99015216 99015308 -4479666 - B3 SINE B2 -32 184 93 4 1340 343 119 33 17 chr15 99015289 99015349 -4479625 - B2_Mm2 SINE B2 -133 62 2 4 1340 403 272 79 53 chr15 99015380 99015683 -4479291 - L1MEc LINE L1 -5471 929 619 4 1340 326 345 103 59 chr15 99015743 99015996 -4478978 - L1MEc LINE L1 -5957 443 180 4 1340 641 103 8 0 chr15 99016158 99016275 -4478699 + (TTG)n Simple_repeat Simple_repeat 1 118 0 4 1340 228 259 84 24 chr15 99016814 99016897 -4478077 + B4A SINE B4 82 169 -123 4 1340 310 154 152 13 chr15 99016842 99016921 -4478053 + PB1D10 SINE Alu 27 116 -1 4 1340 368 361 13 89 chr15 99017235 99017393 -4477581 - B4A SINE B4 -129 163 18 4 1340 284 275 91 78 chr15 99017394 99017548 -4477426 - RLTR25B LTR ERVK 0 1028 873 5 1340 227 205 61 18 chr15 99017567 99017681 -4477293 + (CA)n Simple_repeat Simple_repeat 1 119 0 5 1340 243 331 65 52 chr15 99018847 99019000 -4475974 - B4A SINE B4 0 292 138 5 1340 297 246 14 14 chr15 99019021 99019091 -4475883 - B4A SINE B4 -221 71 2 5 1340 293 253 45 22 chr15 99019126 99019215 -4475759 + MER103 DNA DNA 74 164 -2 5 1340 547 208 100 0 chr15 99019363 99019493 -4475481 + RSINE1 SINE B4 4 146 -19 5 1340 287 247 169 0 chr15 99019845 99019922 -4475052 - B1F1 SINE Alu 0 127 37 5 1340 774 0 0 0 chr15 99020441 99020527 -4474447 + (GA)n Simple_repeat Simple_repeat 1 86 0 5 1340 27 0 0 0 chr15 99020981 99021008 -4473966 + AT_rich Low_complexity Low_complexity 1 27 0 5 1340 863 235 217 10 chr15 99021207 99021516 -4473458 - MTD LTR MaLR -1 418 46 5 1340 694 239 7 7 chr15 99021553 99021692 -4473282 + ID_B1 SINE B4 76 214 -10 5 1340 1002 220 25 10 chr15 99021702 99021904 -4473070 + B3 SINE B2 1 205 -11 6 1340 285 98 0 0 chr15 99022073 99022114 -4472860 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1340 288 53 0 0 chr15 99022293 99022331 -4472643 + (ATTG)n Simple_repeat Simple_repeat 2 39 0 6 1340 734 280 21 21 chr15 99022808 99022998 -4471976 + B3A SINE B2 2 191 -7 6 1340 403 259 215 6 chr15 99023294 99023457 -4471517 + B3 SINE B2 1 197 -19 6 1340 601 245 28 0 chr15 99023469 99023612 -4471362 + B1_Mur2 SINE Alu 2 148 -1 6 1340 2106 43 0 12 chr15 99023692 99023949 -4471025 + L1_Mus2 LINE L1 6312 6565 -1 6 1340 192 77 0 0 chr15 99024040 99024066 -4470908 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 6 1340 612 167 175 0 chr15 99024066 99024186 -4470788 - B1_Mur3 SINE Alu -8 141 1 6 1340 1051 124 0 0 chr15 99024683 99024828 -4470146 + B1_Mur4 SINE Alu 1 145 -5 6 1340 192 27 81 0 chr15 99024841 99024878 -4470096 + (GA)n Simple_repeat Simple_repeat 1 40 0 7 1340 22 35 0 0 chr15 99025791 99025820 -4469154 + AT_rich Low_complexity Low_complexity 1 29 0 7 1340 947 197 77 5 chr15 99025824 99026018 -4468956 - B3 SINE B2 -8 208 1 7 1340 492 18 0 0 chr15 99026029 99026086 -4468888 + (TG)n Simple_repeat Simple_repeat 1 57 0 7 1340 595 226 22 8 chr15 99026096 99026230 -4468744 - B1_Mur1 SINE Alu 0 149 14 7 1340 712 294 21 21 chr15 99026255 99026443 -4468531 - B4 SINE B4 -83 209 22 7 1340 691 223 145 11 chr15 99026592 99026726 -4468248 + B3 SINE B2 1 153 -63 7 1340 423 0 0 0 chr15 99026726 99026773 -4468201 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 1340 691 223 145 11 chr15 99026773 99026824 -4468150 + B3 SINE B2 154 209 -7 7 1340 2172 222 62 35 chr15 99026843 99027412 -4467562 - RLTR40 LTR ERVK -231 586 3 7 1340 438 302 26 0 chr15 99028020 99028136 -4466838 + RSINE1 SINE B4 4 122 -43 7 1340 440 298 17 87 chr15 99028127 99028180 -4466794 + MT2B LTR ERVL 118 158 -443 8 1340 757 217 14 0 chr15 99028180 99028318 -4466656 + B1_Mus2 SINE Alu 1 140 -7 8 1340 427 250 33 0 chr15 99028366 99028458 -4466516 + PB1D10 SINE Alu 10 104 -13 8 1340 227 206 53 186 chr15 99028368 99028481 -4466493 + MT2B2 LTR ERVL 176 273 -311 8 1340 218 236 96 14 chr15 99028456 99028529 -4466445 + ID4_ SINE ID 5 83 0 8 1340 1457 69 26 0 chr15 99028677 99028866 -4466108 + B2_Mm2 SINE B2 2 195 0 8 1340 371 280 24 102 chr15 99029131 99029298 -4465676 + ID_B1 SINE B4 69 222 -2 8 1340 703 222 26 46 chr15 99029151 99029302 -4465672 + B1_Mur2 SINE Alu 1 148 -1 8 1340 361 304 80 15 chr15 99029693 99029732 -4465242 + B4 SINE B4 41 88 -204 8 1340 612 218 29 43 chr15 99029732 99029871 -4465103 + B1_Mur1 SINE Alu 1 137 -12 8 1340 1136 205 5 0 chr15 99030891 99031091 -4463883 + B3 SINE B2 1 201 -15 9 1340 321 307 202 0 chr15 99031131 99031245 -4463729 + B4A SINE B4 2 138 -154 9 1340 1227 48 0 0 chr15 99031246 99031393 -4463581 + B1_Mus2 SINE Alu 1 147 0 9 1340 607 312 39 10 chr15 99031480 99031684 -4463290 + B4A SINE B4 1 210 -82 9 1340 731 132 18 31 chr15 99031813 99031946 -4463028 - B1_Mur1 SINE Alu -1 148 13 9 1340 745 235 97 16 chr15 99031956 99032142 -4462832 - B3 SINE B2 -5 211 11 9 1340 1006 222 14 42 chr15 99032203 99032419 -4462555 + B3 SINE B2 2 211 -5 9 1340 580 299 35 10 chr15 99032589 99032792 -4462182 + B3 SINE B2 3 210 -6 9 1340 191 161 18 0 chr15 99032801 99032813 -4462161 + polypurine Low_complexity Low_complexity 2 13 0 9 1340 2998 53 13 3 chr15 99032813 99033211 -4461763 + L1Md_F3 LINE L1 6200 6584 0 9 1340 1386 65 32 0 chr15 99033211 99033375 -4461599 + B2_Mm1a SINE B2 2 166 -27 1 1340 1223 68 0 0 chr15 99033375 99033523 -4461451 + B1_Mus1 SINE Alu 1 148 0 1 1340 1386 65 32 0 chr15 99033523 99033544 -4461430 + B2_Mm1a SINE B2 167 192 -1 1 1340 191 161 18 0 chr15 99033544 99033569 -4461405 + polypurine Low_complexity Low_complexity 31 55 0 1 1340 213 228 246 0 chr15 99033591 99033648 -4461326 + B4 SINE B4 10 80 -212 1 1340 228 282 129 0 chr15 99033669 99033754 -4461220 - B4 SINE B4 -187 105 10 1 1340 492 312 43 0 chr15 99034196 99034337 -4460637 - B1F SINE Alu -2 147 1 1 1340 964 169 100 55 chr15 99034464 99034664 -4460310 + B3 SINE B2 1 209 -7 1 1340 1004 84 7 40 chr15 99034926 99035075 -4459899 + B1_Mur4 SINE Alu 7 150 0 1 1340 230 298 136 32 chr15 99035134 99035259 -4459715 + B1F SINE Alu 1 138 -11 1 1340 24 0 0 0 chr15 99035352 99035376 -4459598 + AT_rich Low_complexity Low_complexity 1 24 0 1 1340 377 292 44 0 chr15 99036939 99037052 -4457922 - PB1D7 SINE Alu -2 118 1 1 1340 734 186 233 0 chr15 99037091 99037263 -4457711 + B3 SINE B2 5 216 0 1 1340 884 232 10 35 chr15 99037310 99037511 -4457463 + B3 SINE B2 15 210 -6 1 1340 243 0 0 0 chr15 99037526 99037553 -4457421 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1340 490 98 0 24 chr15 99038923 99039007 -4455967 + (TCCC)n Simple_repeat Simple_repeat 1 82 0 1 1340 288 118 0 4 chr15 99039638 99039690 -4455284 - B1_Mus2 SINE Alu 0 147 70 1 1340 649 243 79 0 chr15 99039999 99040176 -4454798 + B3A SINE B2 2 192 -6 1 1340 926 229 28 33 chr15 99040180 99040392 -4454582 + B3 SINE B2 1 211 -5 1 1340 478 286 123 16 chr15 99044573 99044778 -4450196 + B4A SINE B4 6 231 -61 1 1340 447 198 198 5 chr15 99044778 99044946 -4450028 + B3A SINE B2 4 195 -21 1 1340 189 155 0 49 chr15 99044995 99045056 -4449918 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1340 442 180 0 20 chr15 99045087 99045189 -4449785 + (TA)n Simple_repeat Simple_repeat 1 100 0 1 1340 494 259 89 0 chr15 99045211 99045323 -4449651 + B1F1 SINE Alu 21 142 -7 1 1340 222 293 17 0 chr15 99045357 99045415 -4449559 + ID SINE ID 17 75 -149 1 1340 642 238 47 65 chr15 99045462 99045673 -4449301 - B3A SINE B2 -4 212 1 1 1340 568 275 113 16 chr15 99045673 99045839 -4449135 - B4 SINE B4 -50 242 59 1 1340 559 82 20 20 chr15 99045903 99046003 -4448971 - L1Md_F2 LINE L1 0 6582 6483 1 1340 180 0 0 0 chr15 99046094 99046114 -4448860 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 1340 289 297 140 76 chr15 99046142 99046171 -4448803 + B4 SINE B4 55 93 -199 1 1340 613 162 135 23 chr15 99046171 99046304 -4448670 + B1_Mus1 SINE Alu 1 148 0 1 1340 235 318 37 18 chr15 99046351 99046455 -4448519 + ID_B1 SINE B4 104 209 -15 1 1340 2530 191 99 42 chr15 99046455 99046908 -4448066 - RMER19C LTR ERVK 0 611 131 1 1340 2414 29 0 0 chr15 99046908 99047184 -4447790 - L1Md_A LINE L1 0 6582 6307 1 1340 2530 191 99 42 chr15 99047184 99047308 -4447666 - RMER19C LTR ERVK -481 130 2 1 1340 267 125 20 20 chr15 99047343 99047392 -4447582 + B1F SINE Alu 100 148 -1 1 1340 1583 47 16 0 chr15 99047422 99047612 -4447362 + B2_Mm2 SINE B2 1 193 -2 1 1340 1307 56 0 0 chr15 99047621 99047781 -4447193 + B2_Mm2 SINE B2 1 160 -35 1 1340 207 0 0 0 chr15 99047782 99047805 -4447169 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1 1340 511 337 71 6 chr15 99047872 99047947 -4447027 - B4 SINE B4 -18 274 106 1 1340 517 208 10 20 chr15 99047947 99048045 -4446929 - B1_Mur2 SINE Alu -46 103 7 1 1340 493 282 0 0 chr15 99048280 99048390 -4446584 + PB1D10 SINE Alu 1 110 -7 1 1340 1058 201 157 4 chr15 99048833 99049063 -4445911 + B4 SINE B4 22 286 -6 1 1340 198 0 0 0 chr15 99049075 99049097 -4445877 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1 1340 1406 89 11 0 chr15 99049294 99049484 -4445490 - B2_Mm1t SINE B2 -1 192 1 1 1340 243 157 0 0 chr15 99051201 99051252 -4443722 + T-rich Low_complexity Low_complexity 1 51 0 1 1340 1158 61 0 7 chr15 99051282 99051430 -4443544 + B1_Mm SINE Alu 1 147 0 1 1340 213 39 0 0 chr15 99051432 99051458 -4443516 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1340 818 256 29 29 chr15 99051635 99051844 -4443130 - ID_B1 SINE B4 0 224 16 1 1340 349 240 113 7 chr15 99052713 99052834 -4442140 + PB1D9 SINE Alu 14 149 0 1 1340 634 61 0 39 chr15 99052839 99052941 -4442033 + (GAAA)n Simple_repeat Simple_repeat 1 98 0 1 1340 342 0 0 0 chr15 99053387 99053425 -4441549 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 1340 365 257 76 40 chr15 99053540 99053716 -4441258 - MIR SINE MIR -41 221 49 1 1340 36 91 0 0 chr15 99055303 99055402 -4439572 + GC_rich Low_complexity Low_complexity 1 99 0 1 1340 275 323 53 21 chr15 99058643 99058738 -4436236 + MIRb SINE MIR 5 108 -160 1 1340 215 200 0 0 chr15 99059327 99059367 -4435607 + MIRc SINE MIR 109 148 -120 1 1340 405 0 0 0 chr15 99060004 99060049 -4434925 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1340 230 243 40 13 chr15 99060320 99060395 -4434579 + CT-rich Low_complexity Low_complexity 1 77 0 1 1340 728 247 0 7 chr15 99061173 99061320 -4433654 + RSINE1 SINE B4 14 159 -6 1 1340 495 311 0 22 chr15 99061503 99061684 -4433290 + C-rich Low_complexity Low_complexity 4 180 0 1 1340 1189 68 0 0 chr15 99062175 99062322 -4432652 + B1_Mus1 SINE Alu 2 148 0 1 1340 198 0 0 0 chr15 99062323 99062345 -4432629 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 1 1340 243 170 0 0 chr15 99063219 99063266 -4431708 + (CAG)n Simple_repeat Simple_repeat 3 49 0 1 1340 261 0 0 0 chr15 99065194 99065223 -4429751 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1340 288 0 0 0 chr15 99065665 99065697 -4429277 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1340 361 302 17 25 chr15 99065776 99065895 -4429079 + PB1 SINE Alu 2 119 -8 1 1340 228 188 0 40 chr15 99065897 99065947 -4429027 + GA-rich Low_complexity Low_complexity 2 49 0 1 1340 763 237 0 0 chr15 99065963 99066119 -4428855 + ID_B1 SINE B4 2 157 -67 1 1340 928 57 0 8 chr15 99066119 99066244 -4428730 + B1_Mus2 SINE Alu 15 138 -9 1 1340 466 136 12 0 chr15 99066263 99066344 -4428630 + ID_B1 SINE B4 143 224 0 1 1340 198 0 0 0 chr15 99066353 99066375 -4428599 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1 1340 300 257 27 0 chr15 99066559 99066633 -4428341 - PB1D10 SINE Alu -23 94 19 1 1340 224 327 38 9 chr15 99066633 99066662 -4428312 - ID_B1 SINE B4 -47 175 70 1 1340 1167 68 0 7 chr15 99067504 99067652 -4427322 - B1_Mus1 SINE Alu 0 148 2 1 1340 549 108 21 11 chr15 99067679 99067773 -4427201 - B1_Mur3 SINE Alu -1 148 54 1 1340 1195 29 0 0 chr15 99068024 99068160 -4426814 + B1_Mus2 SINE Alu 2 137 -10 1 1340 399 41 0 0 chr15 99068160 99068209 -4426765 + (GAAAA)n Simple_repeat Simple_repeat 2 50 0 1 1340 636 233 67 22 chr15 99068868 99069048 -4425926 - B3 SINE B2 -6 210 23 1 1340 816 188 7 20 chr15 99069079 99069226 -4425748 + B1_Mur2 SINE Alu 5 149 0 1 1340 1073 231 160 31 chr15 99069458 99069776 -4425198 - ORR1D2 LTR MaLR -5 365 7 1 1340 281 274 87 0 chr15 99070479 99070575 -4424399 - B1F1 SINE Alu 0 120 13 1 1340 639 121 0 0 chr15 99070588 99070687 -4424287 + (TCC)n Simple_repeat Simple_repeat 2 100 0 1 1340 452 302 131 6 chr15 99070690 99070845 -4424129 - B3A SINE B2 0 198 24 1 1340 707 167 7 34 chr15 99070845 99070994 -4423980 - RLTR16 LTR ERVK 0 505 361 1 1340 201 222 56 0 chr15 99071656 99071710 -4423264 + MIRb SINE MIR 173 229 -39 1 1340 285 246 74 66 chr15 99071838 99071960 -4423014 + ID_B1 SINE B4 91 213 -11 1 1340 28 29 0 0 chr15 99073207 99073242 -4421732 + AT_rich Low_complexity Low_complexity 1 35 0 1 1340 1227 27 7 20 chr15 99075658 99075807 -4419167 - B1_Mus1 SINE Alu 0 148 2 1 1340 200 100 25 0 chr15 99076368 99076408 -4418566 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 1 1340 252 194 54 27 chr15 99078002 99078076 -4416898 + B1_Mur4 SINE Alu 70 145 -5 1 1340 212 93 47 0 chr15 99078386 99078429 -4416545 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 1 1340 568 138 83 0 chr15 99078435 99078544 -4416430 - B1_Mus2 SINE Alu -1 146 29 1 1340 415 158 64 82 chr15 99081274 99081384 -4413590 + B1_Mur2 SINE Alu 42 149 0 1 1340 501 213 96 0 chr15 99083312 99083448 -4411526 + MTD LTR MaLR 1 149 -270 1 1340 586 201 13 120 chr15 99083449 99083518 -4411456 + MTD LTR MaLR 279 334 -85 1 1340 1675 42 0 0 chr15 99083518 99083711 -4411263 + B2_Mm1a SINE B2 1 193 0 1 1340 586 201 13 120 chr15 99083711 99083799 -4411175 + MTD LTR MaLR 335 419 0 1 1340 207 0 0 0 chr15 99083882 99083905 -4411069 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1340 988 269 48 51 chr15 99084021 99084372 -4410602 - MTEb LTR MaLR -2 377 19 1 1340 695 188 90 0 chr15 99084475 99084608 -4410366 - B1_Mur2 SINE Alu -2 147 3 1 1340 1145 195 24 14 chr15 99084617 99084830 -4410144 - ID_B1 SINE B4 -8 216 2 1 1340 414 191 263 25 chr15 99085476 99085594 -4409380 - B1_Mm SINE Alu -1 146 1 1 1340 2117 265 136 83 chr15 99085594 99086449 -4408525 - MTEb-int LTR MaLR -76 1504 605 1 1340 1137 256 129 36 chr15 99086441 99086581 -4408393 - MTEb-int LTR MaLR -1124 456 325 1 1340 4862 101 63 13 chr15 99086581 99087283 -4407691 + RMER19A LTR ERVK 1 737 0 1 1340 1137 256 129 36 chr15 99087283 99087559 -4407415 - MTEb-int LTR MaLR -1256 324 1 1 1340 766 260 110 37 chr15 99087559 99087858 -4407116 - MTEb LTR MaLR 0 379 59 1 1340 305 78 39 0 chr15 99087858 99087909 -4407065 + Lx6 LINE L1 6519 6571 -889 1 1340 473 249 71 44 chr15 99087909 99088147 -4406827 - RMER10A LTR ERVL -174 224 1 2 1340 1417 154 114 17 chr15 99088149 99088439 -4406535 + RLTR24 LTR ERV1 212 529 0 2 1340 385 313 9 9 chr15 99088493 99088609 -4406365 + PB1D10 SINE Alu 2 117 0 2 1340 1451 66 39 0 chr15 99089475 99089656 -4405318 + B2_Mm2 SINE B2 2 189 -6 2 1340 195 253 0 0 chr15 99090249 99090328 -4404646 + C-rich Low_complexity Low_complexity 4 82 0 2 167 416 242 0 11 chr15 99090331 99090511 -4404463 + CT-rich Low_complexity Low_complexity 1 178 0 2 1341 334 316 116 70 chr15 99090629 99090956 -4404018 - L2 LINE L2 -917 2502 2161 2 1341 784 204 42 0 chr15 99091173 99091315 -4403659 - B1_Mur1 SINE Alu 0 149 2 2 1341 321 314 9 38 chr15 99091473 99091579 -4403395 - RSINE1 SINE B4 -57 108 6 2 1341 366 91 0 0 chr15 99091630 99091685 -4403289 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1341 443 292 58 0 chr15 99091705 99091825 -4403149 - RSINE1 SINE B4 -37 128 2 2 1341 24 32 0 0 chr15 99092002 99092033 -4402941 + AT_rich Low_complexity Low_complexity 1 31 0 2 1341 677 185 37 37 chr15 99092052 99092215 -4402759 + MTD LTR MaLR 10 172 -247 2 1341 891 235 50 9 chr15 99092261 99092480 -4402494 + MTD LTR MaLR 144 371 -48 2 1341 276 30 0 0 chr15 99092480 99092513 -4402461 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 2 1341 1239 55 0 6 chr15 99092514 99092678 -4402296 - B2_Mm2 SINE B2 -32 163 1 2 1341 366 366 80 35 chr15 99092982 99093670 -4401304 + L1M5 LINE L1 4423 5141 -1005 2 1341 279 223 118 47 chr15 99093825 99093952 -4401022 + L1MC LINE L1 5348 5483 -2399 2 1341 1166 68 0 7 chr15 99094211 99094359 -4400615 + B1_Mus1 SINE Alu 2 148 0 2 1341 533 276 6 43 chr15 99094470 99094633 -4400341 + B3 SINE B2 59 215 -1 2 1341 1229 68 0 0 chr15 99094636 99094784 -4400190 + B1_Mus1 SINE Alu 1 148 0 2 1341 231 61 0 0 chr15 99094784 99094817 -4400157 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 2 1341 219 239 0 0 chr15 99095427 99095494 -4399480 + (TGGA)n Simple_repeat Simple_repeat 1 67 0 2 1341 238 338 0 36 chr15 99095584 99095667 -4399307 + L2b LINE L2 3281 3360 -15 2 1341 833 172 20 7 chr15 99095682 99095828 -4399146 + B1_Mur1 SINE Alu 1 148 -1 2 1341 243 0 0 0 chr15 99096036 99096063 -4398911 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2 1341 529 205 103 0 chr15 99096519 99096636 -4398338 + B1_Mur1 SINE Alu 20 148 -1 2 1341 288 137 0 0 chr15 99096644 99096695 -4398279 + (GGAA)n Simple_repeat Simple_repeat 1 51 0 2 1341 441 141 0 0 chr15 99097055 99097140 -4397834 + (T)n Simple_repeat Simple_repeat 1 85 0 2 1341 1212 62 7 0 chr15 99097141 99097287 -4397687 - B1_Mus1 SINE Alu 0 148 2 2 1341 204 40 0 0 chr15 99097414 99097439 -4397535 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 1341 1115 70 28 0 chr15 99097467 99097609 -4397365 + B1_Mus2 SINE Alu 2 147 0 2 1341 1123 199 24 0 chr15 99097626 99097837 -4397137 + B3 SINE B2 1 216 0 2 1341 300 194 271 6 chr15 99097844 99098010 -4396964 - L1MEg LINE L1 -4859 1225 1016 2 1341 332 225 37 12 chr15 99098185 99098266 -4396708 - ID4_ SINE ID 0 83 1 2 1341 303 28 0 0 chr15 99098274 99098310 -4396664 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1341 448 271 154 6 chr15 99098318 99098474 -4396500 - B3A SINE B2 -19 179 1 2 1341 894 146 0 0 chr15 99099049 99099220 -4395754 + (CA)n Simple_repeat Simple_repeat 2 172 0 2 1341 690 109 0 0 chr15 99099238 99099348 -4395626 + (CA)n Simple_repeat Simple_repeat 1 110 0 2 1341 1072 110 0 0 chr15 99099694 99099840 -4395134 - B1_Mus2 SINE Alu 0 147 2 2 1341 228 254 28 0 chr15 99099841 99099912 -4395062 - PB1D10 SINE Alu -22 95 23 2 1341 223 363 25 91 chr15 99100054 99100141 -4394833 - L3 LINE CR1 -3410 1079 992 2 1341 487 209 96 141 chr15 99100141 99100230 -4394744 - B1F2 SINE Alu 0 149 68 2 1341 1389 85 37 0 chr15 99100230 99100418 -4394556 - B2_Mm2 SINE B2 0 195 1 2 1341 487 209 96 141 chr15 99100418 99100484 -4394490 - B1F2 SINE Alu -82 67 1 2 1341 223 363 25 91 chr15 99100484 99100593 -4394381 - L3 LINE CR1 -3498 991 896 2 1341 1197 90 78 0 chr15 99100677 99100843 -4394131 + B2_Mm1t SINE B2 1 179 -14 2 1341 467 80 310 26 chr15 99100890 99101006 -4393968 + B2_Mm2 SINE B2 47 195 0 2 1341 387 253 0 0 chr15 99101110 99101193 -4393781 - ID_B1 SINE B4 -55 169 87 2 1341 258 226 160 11 chr15 99102052 99102146 -4392828 - B1F2 SINE Alu -1 148 41 2 1341 264 293 41 8 chr15 99102189 99102310 -4392664 - B1F2 SINE Alu -22 128 6 2 1341 1119 246 21 28 chr15 99102851 99103139 -4391835 - B4A SINE B4 -4 288 3 2 1341 230 289 40 0 chr15 99103607 99103683 -4391291 - B1_Mus1 SINE Alu -64 84 6 2 1341 1302 101 11 0 chr15 99105247 99105425 -4389549 + B2_Mm1t SINE B2 1 180 -13 2 1341 261 0 0 0 chr15 99105498 99105527 -4389447 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 2 1341 455 288 7 40 chr15 99105804 99105956 -4389018 - RSINE1 SINE B4 -8 157 11 2 1341 300 322 119 11 chr15 99106112 99106288 -4388686 - ORR1E LTR MaLR -164 195 1 2 1341 424 283 57 16 chr15 99106288 99106453 -4388521 - L1M2 LINE L1 -648 5643 5471 2 1341 486 244 98 58 chr15 99106498 99106692 -4388282 + L1MA9 LINE L1 5828 6031 -281 2 1341 239 346 83 38 chr15 99107876 99108008 -4386966 - Charlie12 DNA MER1_type -2715 158 21 2 1341 236 346 30 0 chr15 99108058 99108159 -4386815 + HAL1 LINE L1 1289 1392 -1115 2 1341 936 166 190 16 chr15 99108521 99108705 -4386269 + B3 SINE B2 1 216 0 2 1341 264 334 97 29 chr15 99112120 99112332 -4382642 + MIRm SINE MIR 31 249 -13 2 1341 763 197 51 0 chr15 99112344 99112481 -4382493 + B1_Mur4 SINE Alu 1 144 -6 2 1341 180 0 0 0 chr15 99112483 99112503 -4382471 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2 1341 987 267 38 42 chr15 99112539 99112828 -4382146 + B4A SINE B4 1 288 -4 2 1341 1068 94 195 0 chr15 99112951 99113110 -4381864 - B2_Mm2 SINE B2 -5 190 1 2 1341 802 168 13 47 chr15 99113115 99113265 -4381709 - B1_Mm SINE Alu -2 145 1 2 1341 636 108 0 211 chr15 99113653 99113763 -4381211 - B1_Mus2 SINE Alu -1 146 65 2 1341 1713 26 0 0 chr15 99113763 99113956 -4381018 + B2_Mm1a SINE B2 1 193 0 2 1341 636 108 0 211 chr15 99113956 99113997 -4380977 - B1_Mus2 SINE Alu -83 64 27 2 1341 208 196 0 42 chr15 99114766 99114796 -4380178 + (CTTG)n Simple_repeat Simple_repeat 2 30 0 2 1341 1211 48 0 7 chr15 99114796 99114943 -4380031 - B1_Mus2 SINE Alu 0 147 2 2 1341 208 196 0 42 chr15 99114943 99114960 -4380014 + (CTTG)n Simple_repeat Simple_repeat 1 17 0 2 1341 419 288 349 0 chr15 99115001 99115213 -4379761 - B4A SINE B4 -6 286 1 2 1341 306 67 0 0 chr15 99115432 99115477 -4379497 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1341 255 319 26 34 chr15 99116176 99116293 -4378681 + MIR SINE MIR 111 226 -36 2 1341 1236 41 0 0 chr15 99116294 99116439 -4378535 + B1_Mus2 SINE Alu 2 146 -1 2 1341 296 23 70 0 chr15 99116440 99116483 -4378491 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 2 1341 1274 99 0 20 chr15 99116524 99116720 -4378254 - B2_Mm2 SINE B2 -2 193 2 2 1341 222 37 0 0 chr15 99117789 99117816 -4377158 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1341 294 288 80 9 chr15 99117838 99117950 -4377024 + ORR1E LTR MaLR 1 120 -239 2 1341 1379 89 10 5 chr15 99118328 99118520 -4376454 - B2_Mm1t SINE B2 0 193 1 2 1341 293 308 33 0 chr15 99118525 99118616 -4376358 + L2a LINE L2 3333 3426 0 2 1341 236 313 30 0 chr15 99119050 99119117 -4375857 - ID4_ SINE ID -13 70 2 2 1341 303 246 81 138 chr15 99119416 99119576 -4375398 + B4 SINE B4 48 198 -94 2 1341 706 144 16 31 chr15 99119471 99119600 -4375374 + B1_Mur2 SINE Alu 7 133 -16 2 1341 1163 68 0 13 chr15 99119688 99119838 -4375136 + B1_Mus1 SINE Alu 1 148 0 2 1341 1364 125 88 74 chr15 99119871 99120156 -4374818 - ORR1A4 LTR MaLR -40 289 1 2 1341 23 33 0 0 chr15 99120165 99120195 -4374779 + AT_rich Low_complexity Low_complexity 1 30 0 2 1341 477 50 0 0 chr15 99120217 99120277 -4374697 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 1341 379 0 39 0 chr15 99120277 99120327 -4374647 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 1341 1004 125 33 38 chr15 99120374 99120557 -4374417 - B2_Mm2 SINE B2 -11 184 3 2 1341 23 33 0 0 chr15 99120562 99120592 -4374382 + AT_rich Low_complexity Low_complexity 1 30 0 2 1341 495 149 9 18 chr15 99120652 99120761 -4374213 + (CA)n Simple_repeat Simple_repeat 2 109 0 2 1341 466 237 30 16 chr15 99121243 99121431 -4373543 - B4 SINE B4 -20 272 8 2 1341 352 200 0 0 chr15 99121512 99121572 -4373402 + ID4 SINE ID 4 63 -20 2 1341 279 0 0 0 chr15 99121584 99121615 -4373359 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 1341 321 82 0 0 chr15 99121782 99121831 -4373143 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1341 975 122 7 20 chr15 99121844 99121995 -4372979 + B1_Mur4 SINE Alu 1 149 -1 2 1341 187 140 20 20 chr15 99122004 99122055 -4372919 + GA-rich Low_complexity Low_complexity 4 54 0 2 1341 602 291 159 16 chr15 99122482 99122740 -4372234 - MER115 DNA Tip100 -5 688 394 2 1341 248 306 82 0 chr15 99122781 99122866 -4372108 - MER115 DNA Tip100 -359 334 243 2 1341 194 81 0 26 chr15 99123061 99123099 -4371875 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 2 1341 650 197 55 0 chr15 99123228 99123355 -4371619 + B1F SINE Alu 15 148 -1 2 1341 189 159 0 0 chr15 99123409 99123453 -4371521 + C-rich Low_complexity Low_complexity 1 44 0 2 1341 246 62 0 0 chr15 99123456 99123488 -4371486 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1341 378 0 0 0 chr15 99123762 99123804 -4371170 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1341 1150 44 0 0 chr15 99123826 99123961 -4371013 - B1_Mus1 SINE Alu -13 135 1 3 1341 720 231 7 7 chr15 99123982 99124130 -4370844 + RSINE1 SINE B4 2 149 -16 3 1341 181 57 28 28 chr15 99124218 99124254 -4370720 + (TTTTG)n Simple_repeat Simple_repeat 1 36 0 3 1341 677 192 6 121 chr15 99124254 99124420 -4370554 - B1_Mus1 SINE Alu 0 148 2 3 1341 402 274 20 0 chr15 99124546 99124648 -4370326 - B4 SINE B4 -73 219 116 3 1341 1114 15 68 0 chr15 99125069 99125202 -4369772 + B1_Mus2 SINE Alu 1 142 -5 3 1341 28 79 0 0 chr15 99125402 99125465 -4369509 + GC_rich Low_complexity Low_complexity 1 63 0 3 1341 26 64 0 0 chr15 99125485 99125532 -4369442 + GC_rich Low_complexity Low_complexity 1 47 0 3 1341 21 0 0 0 chr15 99125914 99125935 -4369039 + GC_rich Low_complexity Low_complexity 1 21 0 3 1341 353 210 20 132 chr15 99126252 99126412 -4368562 + MIRm SINE MIR 13 163 -45 3 1341 284 296 12 0 chr15 99126900 99126981 -4367993 - ID4_ SINE ID -1 82 1 3 1341 365 261 166 10 chr15 99127173 99127369 -4367605 + MIR SINE MIR 34 266 -2 3 1341 515 323 66 48 chr15 99128117 99128390 -4366584 + B4A SINE B4 3 280 -12 3 1341 23 0 0 0 chr15 99128759 99128782 -4366192 + AT_rich Low_complexity Low_complexity 1 23 0 3 1341 725 182 29 7 chr15 99128782 99128920 -4366054 - B1_Mus2 SINE Alu -2 145 5 3 1341 444 244 125 8 chr15 99128936 99129056 -4365918 - B1_Mur2 SINE Alu -3 146 13 3 1341 300 274 37 47 chr15 99129319 99129426 -4365548 + PB1D10 SINE Alu 2 107 -10 3 1341 445 239 7 97 chr15 99129433 99129577 -4365397 + B1F SINE Alu 13 143 -6 3 1341 437 278 39 31 chr15 99129751 99129881 -4365093 - RSINE1 SINE B4 -17 148 18 3 1341 435 289 62 0 chr15 99129900 99130028 -4364946 - B1F SINE Alu -7 142 7 3 1341 936 140 88 0 chr15 99130137 99130308 -4364666 - B2_Mm2 SINE B2 -7 188 3 3 1341 770 191 8 24 chr15 99130975 99131168 -4363806 + B3 SINE B2 1 187 -11 3 1341 964 82 126 0 chr15 99131553 99131712 -4363262 + B2_Mm2 SINE B2 15 193 -2 3 1341 795 176 49 0 chr15 99131720 99131862 -4363112 + B1_Mur2 SINE Alu 1 149 0 3 1341 425 274 126 119 chr15 99131890 99132176 -4362798 - B4A SINE B4 -2 290 3 3 1341 738 227 49 34 chr15 99132194 99132399 -4362575 - B3 SINE B2 -2 214 7 3 1341 311 316 143 46 chr15 99132618 99132814 -4362160 - L1MC4a LINE L1 -1972 5910 5696 3 1341 328 319 39 67 chr15 99132955 99133133 -4361841 - L2a LINE L2 -4 3422 3250 3 1341 486 0 0 0 chr15 99135111 99135165 -4359809 + (TTCC)n Simple_repeat Simple_repeat 2 55 0 3 1341 189 0 0 0 chr15 99136637 99136658 -4358316 + (TTCC)n Simple_repeat Simple_repeat 3 23 0 3 1341 234 312 64 13 chr15 99138993 99139071 -4355903 - ID4_ SINE ID 0 83 2 3 1341 271 243 0 139 chr15 99140628 99140714 -4354260 + PB1D7 SINE Alu 46 119 -1 3 1341 482 314 141 58 chr15 99140938 99141049 -4353925 + Charlie8 DNA MER1_type 11 123 -2305 3 1341 511 174 71 35 chr15 99141049 99141162 -4353812 - PB1D10 SINE Alu 0 117 1 3 1341 482 314 141 58 chr15 99141162 99141483 -4353491 + Charlie8 DNA MER1_type 124 479 -1949 3 1341 1367 72 28 6 chr15 99141616 99141798 -4353176 + B2_Mm2 SINE B2 1 186 -9 3 1341 349 228 109 0 chr15 99141978 99142079 -4352895 + PB1D7 SINE Alu 1 112 -8 3 1341 838 148 16 0 chr15 99142545 99142673 -4352301 + B1_Mus2 SINE Alu 2 131 -16 3 1341 1314 69 64 0 chr15 99142673 99142846 -4352128 - B2_Mm2 SINE B2 -9 186 3 3 1341 436 265 170 13 chr15 99143945 99144098 -4350876 + B4A SINE B4 28 204 -88 3 1341 247 307 123 0 chr15 99144561 99144675 -4350299 + MIRb SINE MIR 127 254 -14 3 1341 21 0 0 0 chr15 99147416 99147437 -4347537 + AT_rich Low_complexity Low_complexity 1 21 0 3 1341 216 0 0 0 chr15 99149872 99149896 -4345078 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1341 230 231 0 0 chr15 99153758 99153810 -4341164 + GA-rich Low_complexity Low_complexity 1 52 0 3 1341 831 209 0 7 chr15 99154823 99154972 -4340002 + B1_Mus1 SINE Alu 1 148 0 3 1341 347 300 54 9 chr15 99156483 99156594 -4338380 + PB1D7 SINE Alu 5 120 0 3 1341 203 133 44 0 chr15 99156621 99156666 -4338308 + A-rich Low_complexity Low_complexity 5 51 0 3 1341 224 273 0 0 chr15 99157219 99157274 -4337700 + MER5B DNA MER1_type 25 79 -99 3 1341 854 12 81 0 chr15 99157298 99157458 -4337516 + (GA)n Simple_repeat Simple_repeat 1 173 0 3 1341 216 175 0 24 chr15 99157458 99157499 -4337475 + GA-rich Low_complexity Low_complexity 2 41 0 3 1341 818 250 33 0 chr15 99157501 99157685 -4337289 - B3 SINE B2 -24 192 3 3 1341 450 0 0 0 chr15 99157874 99157924 -4337050 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1341 902 167 0 0 chr15 99165427 99165571 -4329403 - B1_Mus2 SINE Alu 0 147 4 3 1341 908 257 29 0 chr15 99165587 99165797 -4329177 - B3 SINE B2 0 216 1 3 1341 465 258 41 0 chr15 99165833 99165930 -4329044 - PB1D10 SINE Alu -16 101 1 3 1341 234 218 0 75 chr15 99167927 99168061 -4326913 + (CATGC)n Simple_repeat Simple_repeat 3 126 0 3 1341 308 303 120 53 chr15 99168383 99168533 -4326441 + RSINE1 SINE B4 6 165 0 3 1341 951 130 7 0 chr15 99168658 99168804 -4326170 + B1_Mus1 SINE Alu 2 148 0 3 1341 537 200 138 88 chr15 99168899 99169080 -4325894 - B3A SINE B2 -8 190 1 3 1341 810 199 22 0 chr15 99170570 99170706 -4324268 - B1_Mus1 SINE Alu -9 139 1 3 1341 1151 190 50 41 chr15 99170720 99170960 -4324014 + MTD LTR MaLR 28 269 -150 3 1341 3236 130 117 15 chr15 99170960 99171354 -4323620 - RMER6A LTR ERVK 0 756 322 3 1341 363 44 0 0 chr15 99171354 99171399 -4323575 + (TC)n Simple_repeat Simple_repeat 1 45 0 3 1341 3236 130 117 15 chr15 99171399 99171596 -4323378 - RMER6A LTR ERVK -435 321 105 3 1341 308 207 322 0 chr15 99171595 99171682 -4323292 + MTD LTR MaLR 298 412 -9 3 1341 277 339 91 48 chr15 99176422 99176608 -4318366 + MLT1J LTR MaLR 118 311 -201 3 1341 279 244 12 35 chr15 99176653 99176738 -4318236 + ID4 SINE ID 1 83 0 3 1341 380 242 11 11 chr15 99176775 99176867 -4318107 + PB1D10 SINE Alu 5 96 -21 3 1341 449 328 22 22 chr15 99177692 99177870 -4317104 + MIR SINE MIR 64 241 -21 3 1341 352 382 116 0 chr15 99178425 99178624 -4316350 - MIRb SINE MIR -46 222 1 3 1341 546 168 109 23 chr15 99178897 99179025 -4315949 + B1_Mur2 SINE Alu 5 143 -6 3 1341 578 27 0 26 chr15 99179380 99179457 -4315517 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 3 1341 1193 64 6 0 chr15 99179457 99179614 -4315360 - B2_Mm2 SINE B2 -36 159 2 3 1341 504 207 159 22 chr15 99180061 99180199 -4314775 - RSINE1 SINE B4 -6 159 3 3 1341 1229 59 0 0 chr15 99181023 99181176 -4313798 + B2_Mm2 SINE B2 2 154 -41 3 1341 231 36 0 0 chr15 99181176 99181204 -4313770 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 3 1341 180 0 0 0 chr15 99181226 99181246 -4313728 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 1341 813 178 184 0 chr15 99181277 99181451 -4313523 + B3 SINE B2 1 206 -10 3 1341 611 214 43 0 chr15 99181518 99181635 -4313339 + B1_Mur1 SINE Alu 9 130 -19 3 1341 864 101 15 44 chr15 99181846 99181981 -4312993 + B1_Mur3 SINE Alu 4 134 -15 3 1341 222 189 0 0 chr15 99181986 99182023 -4312951 + (CCA)n Simple_repeat Simple_repeat 1 37 0 3 1341 210 71 0 0 chr15 99182046 99182074 -4312900 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1341 433 215 101 18 chr15 99182399 99182508 -4312466 + PB1D9 SINE Alu 2 119 -1 3 1341 246 299 51 42 chr15 99182556 99182675 -4312299 + MIR SINE MIR 44 155 -113 3 1341 186 355 21 53 chr15 99183129 99183224 -4311750 + L2c LINE L2 2325 2416 -1003 3 1341 365 289 174 44 chr15 99183568 99183958 -4311016 + L2c LINE L2 2937 3377 -10 3 1341 1063 68 0 0 chr15 99184578 99184710 -4310264 + B1_Mus1 SINE Alu 1 132 -16 3 1341 971 230 25 0 chr15 99185179 99185379 -4309595 - B3 SINE B2 -10 206 2 3 1341 792 255 32 19 chr15 99185469 99185685 -4309289 + ID_B1 SINE B4 2 220 -4 3 1341 545 347 46 21 chr15 99185687 99185881 -4309093 - MIRb SINE MIR -17 251 53 3 1341 628 142 17 42 chr15 99185882 99186000 -4308974 + PB1D9 SINE Alu 5 119 -1 3 1341 303 313 138 11 chr15 99186480 99186661 -4308313 + L2a LINE L2 3223 3426 0 3 1341 850 212 112 16 chr15 99187715 99187964 -4307010 - B4A SINE B4 -18 274 2 3 1341 897 227 102 15 chr15 99188633 99188839 -4306135 - ID_B1 SINE B4 0 224 1 3 1341 181 200 0 0 chr15 99189015 99189050 -4305924 + MIR SINE MIR 203 237 -25 3 1341 257 234 51 13 chr15 99189217 99189295 -4305679 - ID_B1 SINE B4 -29 195 115 3 1341 600 242 8 0 chr15 99189325 99189457 -4305517 - ID_B1 SINE B4 0 224 92 3 1341 214 295 76 83 chr15 99189493 99189637 -4305337 + B4 SINE B4 76 218 -74 3 1341 389 238 127 32 chr15 99189520 99189646 -4305328 + B1F SINE Alu 12 149 0 3 1341 427 295 89 0 chr15 99189655 99189767 -4305207 + MIRb SINE MIR 35 156 -112 3 1341 206 0 0 65 chr15 99189862 99189893 -4305081 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 3 1341 23 33 0 0 chr15 99190593 99190623 -4304351 + AT_rich Low_complexity Low_complexity 1 30 0 3 1341 201 350 71 30 chr15 99190787 99190955 -4304019 - L2c LINE L2 -13 3374 3200 4 1341 268 111 0 0 chr15 99190962 99190998 -4303976 + U2 snRNA snRNA 1 36 -152 4 1341 181 368 74 33 chr15 99191033 99191154 -4303820 - L2c LINE L2 -284 3142 3017 4 1341 195 309 156 29 chr15 99191215 99191388 -4303586 - L2c LINE L2 -699 2720 2526 4 1341 863 45 9 0 chr15 99191405 99191517 -4303457 + (GAGAA)n Simple_repeat Simple_repeat 4 116 0 4 1341 338 254 140 44 chr15 99191672 99191808 -4303166 + B1F2 SINE Alu 1 149 0 4 1341 439 263 8 34 chr15 99191887 99192005 -4302969 - PB1D7 SINE Alu -3 117 3 4 1341 338 297 102 0 chr15 99192214 99192332 -4302642 + MIRb SINE MIR 111 240 -28 4 1341 592 99 55 0 chr15 99192432 99192523 -4302451 - B1_Mur1 SINE Alu -21 128 33 4 1341 23 33 0 0 chr15 99192560 99192590 -4302384 + AT_rich Low_complexity Low_complexity 1 30 0 4 1341 283 330 39 0 chr15 99193116 99193219 -4301755 + PB1D10 SINE Alu 1 107 -10 4 1341 24 32 0 0 chr15 99193472 99193503 -4301471 + AT_rich Low_complexity Low_complexity 1 31 0 4 1341 444 226 160 8 chr15 99193779 99193904 -4301070 + RSINE1 SINE B4 22 165 0 4 1341 315 0 0 0 chr15 99194062 99194097 -4300877 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 1341 239 196 46 156 chr15 99194343 99194358 -4300616 + MT2B LTR ERVL 154 156 -445 4 1341 464 147 68 76 chr15 99194358 99194476 -4300498 + PB1D9 SINE Alu 4 120 0 4 1341 629 269 0 7 chr15 99196053 99196188 -4298786 + B1_Mur2 SINE Alu 4 137 -12 4 1341 324 347 0 94 chr15 99196188 99196199 -4298775 + ID_B1 SINE B4 85 216 -8 4 1341 369 102 0 0 chr15 99196199 99196258 -4298716 + (TGGA)n Simple_repeat Simple_repeat 4 62 0 4 1341 468 297 100 14 chr15 99196450 99196590 -4298384 + RSINE1 SINE B4 10 161 -4 4 1341 438 248 25 0 chr15 99196608 99196729 -4298245 + L1M5 LINE L1 5586 5709 -415 4 1341 496 171 200 16 chr15 99196870 99196995 -4297979 + B1_Mur3 SINE Alu 1 148 -1 4 1341 463 195 276 58 chr15 99197015 99197189 -4297785 + B3 SINE B2 1 212 -4 4 1341 22 35 0 0 chr15 99197218 99197247 -4297727 + AT_rich Low_complexity Low_complexity 1 29 0 4 1341 654 203 0 0 chr15 99197336 99197474 -4297500 + (TA)n Simple_repeat Simple_repeat 2 139 0 4 1341 1540 67 0 5 chr15 99197559 99197755 -4297219 + B2_Mm2 SINE B2 1 195 0 4 1341 448 283 50 0 chr15 99197776 99197875 -4297099 - PB1D10 SINE Alu -8 109 6 4 1341 422 256 131 8 chr15 99197938 99198060 -4296914 + RSINE1 SINE B4 3 139 -26 4 1341 216 86 0 0 chr15 99198236 99198271 -4296703 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1341 1175 51 0 0 chr15 99198271 99198409 -4296565 - B1_Mus2 SINE Alu -9 138 1 4 1341 426 0 0 0 chr15 99198409 99198459 -4296515 - L1_Mus1 LINE L1 -9 6558 6509 4 1341 896 56 0 0 chr15 99198459 99198566 -4296408 - U6 snRNA snRNA 0 107 1 4 1341 192 171 47 47 chr15 99198941 99198984 -4295990 + L2b LINE L2 3324 3366 -9 4 1341 461 197 32 35 chr15 99201128 99201250 -4293724 + PB1D10 SINE Alu 12 131 -18 4 1341 1299 27 0 0 chr15 99201341 99201488 -4293486 + B1_Mm SINE Alu 1 147 0 4 1341 186 43 0 0 chr15 99201488 99201511 -4293463 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1341 660 213 34 35 chr15 99201532 99201712 -4293262 + B3 SINE B2 2 184 -9 4 1341 234 250 141 26 chr15 99202251 99202329 -4292645 + MLT1K LTR MaLR 2 88 -507 4 1341 466 300 84 52 chr15 99202372 99202622 -4292352 + MLT1K LTR MaLR 214 471 -124 4 1341 290 289 0 24 chr15 99202649 99202734 -4292240 - L2a LINE L2 -2 3424 3342 4 1341 501 255 51 73 chr15 99202902 99202921 -4292053 + B4A SINE B4 75 153 -139 4 1341 1120 58 0 0 chr15 99202921 99203060 -4291914 + B1_Mus1 SINE Alu 10 148 0 4 1341 501 255 51 73 chr15 99203060 99203080 -4291894 + B4A SINE B4 154 248 -44 4 1341 422 108 333 0 chr15 99203110 99203203 -4291771 - B3 SINE B2 -92 124 1 4 1341 212 307 132 62 chr15 99203653 99203910 -4291064 - L2a LINE L2 -59 3328 3054 4 1341 416 266 18 9 chr15 99204075 99204189 -4290785 - PB1D10 SINE Alu -2 115 1 4 1341 1174 0 50 0 chr15 99204447 99204650 -4290324 + (TG)n Simple_repeat Simple_repeat 1 213 0 4 1341 580 250 48 0 chr15 99204650 99204774 -4290200 - RSINE1 SINE B4 -24 141 12 4 1341 191 349 11 46 chr15 99204809 99204896 -4290078 - MIRb SINE MIR -67 201 118 4 1341 476 188 73 0 chr15 99205092 99205188 -4289786 - B1_Mur2 SINE Alu -4 145 43 4 1341 241 247 107 36 chr15 99205128 99205212 -4289762 - MT2B LTR ERVL -345 256 167 4 1341 555 322 83 22 chr15 99205220 99205420 -4289554 - B3A SINE B2 0 216 1 4 1341 911 130 8 0 chr15 99205633 99205764 -4289210 + B1_Mur2 SINE Alu 12 143 -6 4 1341 381 282 121 8 chr15 99205868 99206000 -4288974 + B1F SINE Alu 1 147 -2 4 1341 864 158 8 0 chr15 99206002 99206135 -4288839 - B1_Mus2 SINE Alu -5 142 9 4 1341 802 190 0 0 chr15 99206175 99206312 -4288662 + B1_Mus2 SINE Alu 2 138 -9 4 1341 180 0 0 0 chr15 99206315 99206335 -4288639 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 4 1341 289 324 86 20 chr15 99206353 99206504 -4288470 + L2c LINE L2 3081 3241 -146 4 1341 1083 103 0 14 chr15 99206971 99207119 -4287855 + B1_Mus2 SINE Alu 2 147 0 4 1341 231 213 0 41 chr15 99207555 99207604 -4287370 + B1F SINE Alu 1 47 -102 4 1341 234 0 0 0 chr15 99207735 99207761 -4287213 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 4 1341 243 0 0 0 chr15 99207761 99207787 -4287187 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1341 820 154 0 23 chr15 99207790 99207923 -4287051 - B1_Mur4 SINE Alu -14 136 7 4 1341 268 247 184 10 chr15 99207931 99208029 -4286945 - PB1D7 SINE Alu 0 120 6 4 1341 467 167 241 0 chr15 99208060 99208168 -4286806 - B1F SINE Alu -1 148 15 4 1341 255 254 173 71 chr15 99208061 99208188 -4286786 - B4A SINE B4 -68 224 85 4 1341 1079 98 117 28 chr15 99208247 99208406 -4286568 + B2_Mm2 SINE B2 1 155 -40 4 1341 189 0 0 0 chr15 99208406 99208427 -4286547 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 4 1341 1079 98 117 28 chr15 99208427 99208446 -4286528 + B2_Mm2 SINE B2 156 195 0 4 1341 332 247 45 34 chr15 99208448 99208536 -4286438 + L1MD LINE L1 5354 5442 -917 4 1341 310 281 88 32 chr15 99208619 99208744 -4286230 + L1ME2 LINE L1 5457 5588 -576 4 1341 485 256 164 19 chr15 99208779 99208938 -4286036 + B3A SINE B2 1 182 -16 4 1341 456 179 26 0 chr15 99208966 99209044 -4285930 + B3A SINE B2 1 80 -118 4 1341 462 160 344 0 chr15 99209050 99209181 -4285793 - ORR1D1 LTR MaLR 0 370 195 4 1341 776 53 18 3 chr15 99209181 99209288 -4285686 + B1_Mus2 SINE Alu 1 147 0 4 1341 922 225 40 10 chr15 99209293 99209495 -4285479 - ORR1D1 LTR MaLR -166 208 1 4 1341 496 214 9 9 chr15 99209497 99209610 -4285364 + B3A SINE B2 86 198 0 4 1341 240 250 0 136 chr15 99209719 99209807 -4285167 + PB1D9 SINE Alu 44 119 -1 4 1341 309 310 199 40 chr15 99209889 99210161 -4284813 + L1ME2 LINE L1 5848 6162 -2 4 1341 1630 37 0 0 chr15 99210181 99210370 -4284604 + B2_Mm1a SINE B2 2 190 -3 4 1341 561 90 222 51 chr15 99210392 99210509 -4284465 + B1_Mur3 SINE Alu 13 149 0 4 1341 268 401 37 37 chr15 99210555 99210718 -4284256 + L2b LINE L2 3212 3374 -1 4 1341 23 0 0 0 chr15 99210879 99210902 -4284072 + AT_rich Low_complexity Low_complexity 1 23 0 4 1341 929 121 7 0 chr15 99210906 99211047 -4283927 + B1_Mus1 SINE Alu 7 148 0 4 1341 360 155 0 0 chr15 99211085 99211143 -4283831 - HAL1-3A_ME LINE L1 -825 2033 1976 4 1341 1158 161 0 2 chr15 99211143 99211632 -4283342 + (TG)n Simple_repeat Simple_repeat 1 488 0 4 1341 665 326 16 21 chr15 99211734 99211928 -4283046 - ID_B1 SINE B4 -29 195 3 4 1341 364 299 8 127 chr15 99211971 99212067 -4282907 + ID_B1 SINE B4 91 184 -40 4 1341 1122 68 0 0 chr15 99212067 99212200 -4282774 + B1_Mus1 SINE Alu 3 135 -13 4 1341 714 24 0 0 chr15 99212203 99212287 -4282687 + (GAA)n Simple_repeat Simple_repeat 2 85 0 4 1341 364 299 8 127 chr15 99212287 99212320 -4282654 + ID_B1 SINE B4 185 208 -16 4 1341 972 229 19 10 chr15 99212434 99212641 -4282333 + B3 SINE B2 2 210 -6 4 1341 739 230 78 20 chr15 99212867 99213071 -4281903 + B3 SINE B2 1 216 0 4 1341 1151 103 0 6 chr15 99213085 99213251 -4281723 + B2_Mm2 SINE B2 29 193 -2 4 1341 235 253 232 0 chr15 99213502 99213597 -4281377 + MIR SINE MIR 92 208 -54 4 1341 1014 96 92 43 chr15 99213660 99213845 -4281129 + B2_Mm2 SINE B2 2 195 0 4 1341 304 57 0 70 chr15 99213859 99213873 -4281101 + (GAAA)n Simple_repeat Simple_repeat 2 15 0 4 1341 1204 68 0 0 chr15 99213873 99214020 -4280954 + B1_Mus2 SINE Alu 1 147 0 4 1341 304 57 0 70 chr15 99214020 99214062 -4280912 + (GAAA)n Simple_repeat Simple_repeat 4 42 0 4 1341 273 244 139 6 chr15 99214064 99214169 -4280805 + ID4 SINE ID 2 115 -37 4 1341 756 231 27 219 chr15 99214176 99214359 -4280615 - B3 SINE B2 -6 210 45 4 1341 259 280 55 83 chr15 99214396 99214505 -4280469 + MT2B LTR ERVL 155 260 -341 4 1341 465 220 0 0 chr15 99214431 99214526 -4280448 + B1_Mur1 SINE Alu 34 129 -21 4 1341 326 269 90 27 chr15 99214528 99214639 -4280335 - PB1 SINE Alu -9 118 1 4 1341 1244 103 23 0 chr15 99215304 99215479 -4279495 + B2_Mm2 SINE B2 3 181 -14 4 1341 21 36 0 0 chr15 99215523 99215551 -4279423 + AT_rich Low_complexity Low_complexity 1 28 0 4 1341 627 224 31 43 chr15 99215560 99215723 -4279251 - RSINE1 SINE B4 0 165 5 4 1341 316 200 0 49 chr15 99215795 99215874 -4279100 - B1_Mus2 SINE Alu -80 69 2 4 1341 267 224 0 33 chr15 99215823 99215883 -4279091 - B4 SINE B4 -155 137 80 4 1341 1729 21 0 0 chr15 99216248 99216440 -4278534 - B2_Mm1a SINE B2 -1 192 1 4 1341 302 120 100 0 chr15 99216533 99216583 -4278391 - ORR1A3 LTR MaLR -1 328 274 5 1341 258 32 0 0 chr15 99216584 99216615 -4278359 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1341 243 57 0 28 chr15 99216615 99216644 -4278330 - B1_Mur4 SINE Alu -11 139 111 5 1341 1232 102 28 11 chr15 99216677 99216855 -4278119 - B2_Mm2 SINE B2 -14 181 1 5 1341 1368 164 67 77 chr15 99216856 99217141 -4277833 - ORR1A3 LTR MaLR -44 282 1 5 1341 375 135 394 0 chr15 99217193 99217297 -4277677 - B2_Mm1t SINE B2 -1 192 48 5 1341 211 132 26 26 chr15 99217263 99217302 -4277672 - B4 SINE B4 -213 79 41 5 1341 1220 78 66 0 chr15 99217326 99217493 -4277481 - B2_Mm1t SINE B2 -14 179 2 5 1341 1843 282 95 25 chr15 99217493 99218126 -4276848 - ORR1E-int LTR MaLR -903 677 1 5 1341 356 267 39 77 chr15 99218169 99218279 -4276695 - ORR1E LTR MaLR 0 379 273 5 1341 2208 141 35 21 chr15 99218279 99218656 -4276318 - RLTR14 LTR ERV1 0 382 1 5 1341 356 267 39 77 chr15 99218656 99218675 -4276299 - ORR1E LTR MaLR -107 272 255 5 1341 767 289 5 31 chr15 99218767 99218963 -4276011 - ORR1E LTR MaLR -168 191 1 5 1341 234 0 0 0 chr15 99219182 99219208 -4275766 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1341 863 243 74 39 chr15 99219302 99219652 -4275322 + ORR1C2 LTR MaLR 17 378 -6 5 1341 2277 130 69 42 chr15 99219652 99219688 -4275286 + RMER6B LTR ERVK 1 41 -420 5 1341 769 85 246 0 chr15 99219688 99219806 -4275168 - B1_Mus1 SINE Alu 0 148 2 5 1341 2277 130 69 42 chr15 99219806 99220218 -4274756 + RMER6B LTR ERVK 42 461 0 5 1341 822 131 28 28 chr15 99220346 99220487 -4274487 - B1_Mus2 SINE Alu -5 142 2 5 1341 329 342 48 19 chr15 99220577 99220697 -4274277 + B1F SINE Alu 1 123 -26 5 1341 306 354 76 17 chr15 99220590 99220708 -4274266 + ID_B1 SINE B4 95 219 -5 5 1341 368 243 67 19 chr15 99220964 99221069 -4273905 - RMER4A LTR ERVK 0 466 357 5 1341 2466 139 58 10 chr15 99221060 99221474 -4273500 - RMER4B LTR ERVK -150 435 2 5 167 660 210 25 8 chr15 99221488 99221608 -4273366 - B3 SINE B2 -86 130 9 5 1342 180 0 0 0 chr15 99221637 99221657 -4273317 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1342 375 278 34 17 chr15 99221657 99221774 -4273200 - PB1D9 SINE Alu 0 120 2 5 1342 239 246 16 0 chr15 99221907 99221968 -4273006 - ID_B1 SINE B4 -57 167 106 5 1342 225 196 0 0 chr15 99221975 99222026 -4272948 + C-rich Low_complexity Low_complexity 64 114 0 5 1342 504 187 33 0 chr15 99222106 99222197 -4272777 - B1_Mur3 SINE Alu -21 128 35 5 1342 293 243 148 70 chr15 99222129 99222244 -4272730 - MT2B LTR ERVL -343 258 135 5 1342 544 93 370 9 chr15 99222885 99222993 -4271981 + B1_Mus2 SINE Alu 1 147 0 5 1342 288 0 0 0 chr15 99225082 99225114 -4269860 + (C)n Simple_repeat Simple_repeat 1 32 0 5 1342 253 177 241 0 chr15 99225875 99225954 -4269020 + B3 SINE B2 15 112 -104 5 1342 646 185 98 15 chr15 99226213 99226345 -4268629 + B1_Mm SINE Alu 1 143 -4 5 1342 1206 174 92 0 chr15 99226485 99226692 -4268282 + URR1A DNA MER1_type 1 226 0 5 1342 219 280 37 74 chr15 99227358 99227439 -4267535 - ID4 SINE ID -4 79 2 5 1342 246 145 78 31 chr15 99227711 99227775 -4267199 + 4.5SRNA scRNA scRNA 20 86 -8 5 1342 611 93 10 0 chr15 99227724 99227821 -4267153 + B1_Mur3 SINE Alu 40 137 -12 5 1342 307 286 33 11 chr15 99228092 99228184 -4266790 - B1F2 SINE Alu -52 97 4 5 1342 225 305 0 0 chr15 99228132 99228191 -4266783 - B4A SINE B4 -152 140 82 5 1342 261 0 0 0 chr15 99228274 99228303 -4266671 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1342 263 257 171 0 chr15 99228303 99228373 -4266601 - ID4_ SINE ID 0 83 2 5 1342 424 186 0 44 chr15 99228392 99228482 -4266492 + PB1D9 SINE Alu 34 119 -1 5 1342 1398 100 11 0 chr15 99228602 99228792 -4266182 + B2_Mm1a SINE B2 1 192 -1 5 1342 443 277 52 0 chr15 99228881 99229036 -4265938 - RSINE1 SINE B4 0 165 3 5 1342 655 182 8 16 chr15 99229118 99229246 -4265728 + B1_Mur4 SINE Alu 1 127 -23 5 1342 1567 44 16 0 chr15 99229400 99229583 -4265391 - B2_Mm1t SINE B2 -7 186 1 5 1342 519 198 240 60 chr15 99229596 99229779 -4265195 - B3 SINE B2 0 216 1 5 1342 888 145 20 20 chr15 99231050 99231198 -4263776 + B1_Mur1 SINE Alu 1 148 -1 5 1342 482 251 68 57 chr15 99231213 99231390 -4263584 + B3 SINE B2 1 179 -37 5 1342 229 196 0 0 chr15 99231485 99231531 -4263443 + PB1D9 SINE Alu 74 119 -1 5 1342 221 349 27 45 chr15 99231632 99231743 -4263231 + RSINE1 SINE B4 55 163 -2 5 1342 21 0 0 0 chr15 99232340 99232361 -4262613 + AT_rich Low_complexity Low_complexity 1 21 0 5 1342 216 0 0 0 chr15 99232604 99232628 -4262346 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 1342 1034 83 38 0 chr15 99233003 99233135 -4261839 + B1_Mus1 SINE Alu 2 138 -10 5 1342 333 0 0 0 chr15 99233135 99233172 -4261802 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1342 713 54 0 0 chr15 99233201 99233293 -4261681 - B2_Mm2 SINE B2 -103 92 1 5 1342 336 210 157 20 chr15 99233769 99233871 -4261103 - PB1D9 SINE Alu -3 117 2 5 1342 340 243 383 5 chr15 99233875 99234087 -4260887 - MER82 DNA MER2_type -260 393 102 5 1342 510 17 0 0 chr15 99234321 99234380 -4260594 + (TG)n Simple_repeat Simple_repeat 1 59 0 5 1342 26 0 0 0 chr15 99235279 99235305 -4259669 + AT_rich Low_complexity Low_complexity 1 26 0 5 1342 348 167 0 42 chr15 99235395 99235482 -4259492 + B1_Mur3 SINE Alu 41 149 0 5 1342 233 218 106 75 chr15 99237158 99237252 -4257722 - MT2B LTR ERVL -328 273 177 5 1342 569 216 101 0 chr15 99237173 99237312 -4257662 - ID_B1 SINE B4 -45 179 27 5 1342 1013 79 28 7 chr15 99238202 99238343 -4256631 - B1_Mus1 SINE Alu 0 148 5 5 1342 467 247 267 12 chr15 99238362 99238534 -4256440 - B3 SINE B2 0 216 1 5 1342 294 294 130 22 chr15 99240866 99241050 -4253924 - ORR1D1 LTR MaLR -129 245 42 5 1342 249 234 100 60 chr15 99241414 99241514 -4253460 - RSINE1 SINE B4 -9 156 53 5 1342 1155 75 0 13 chr15 99242761 99242910 -4252064 - B1_Mus1 SINE Alu 0 148 2 5 1342 430 263 0 41 chr15 99243159 99243282 -4251692 - B3 SINE B2 0 216 99 5 1342 290 307 114 0 chr15 99243280 99243394 -4251580 - ID_B1 SINE B4 -47 177 51 5 1342 208 206 0 0 chr15 99243457 99243491 -4251483 + (CG)n Simple_repeat Simple_repeat 2 35 0 5 1342 1591 38 5 0 chr15 99244235 99244421 -4250553 - B2_Mm1a SINE B2 -2 191 5 5 1342 380 276 113 31 chr15 99244640 99244834 -4250140 + B3 SINE B2 6 215 -1 5 1342 829 118 0 0 chr15 99244846 99244973 -4250001 + B1_Mur3 SINE Alu 11 137 -12 5 1342 244 0 56 0 chr15 99244973 99245009 -4249965 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 5 1342 1639 32 11 0 chr15 99245140 99245330 -4249644 - B2_Mm1a SINE B2 0 193 2 5 1342 25 22 0 43 chr15 99245380 99245397 -4249577 + AT_rich Low_complexity Low_complexity 1 17 0 5 1342 259 286 39 0 chr15 99245397 99245474 -4249500 + ID4 SINE ID 1 80 -3 5 1342 25 22 0 43 chr15 99245474 99245503 -4249471 + AT_rich Low_complexity Low_complexity 1 28 0 5 1342 410 350 0 0 chr15 99245503 99245623 -4249351 + B1F SINE Alu 1 120 -29 5 1342 234 236 27 40 chr15 99245619 99245694 -4249280 + ID_B1 SINE B4 105 178 -46 5 1342 229 220 46 0 chr15 99245751 99245860 -4249114 + (TA)n Simple_repeat Simple_repeat 2 115 0 5 1342 324 266 114 9 chr15 99245862 99245976 -4248998 + L1MD LINE L1 5478 5603 -756 5 1342 338 203 0 0 chr15 99245991 99246050 -4248924 - B3A SINE B2 -136 62 4 5 1342 336 48 0 0 chr15 99246050 99246092 -4248882 + (TTTTC)n Simple_repeat Simple_repeat 1 42 0 5 1342 489 34 0 0 chr15 99246095 99246154 -4248820 + (TC)n Simple_repeat Simple_repeat 2 60 0 5 1342 852 181 50 28 chr15 99246154 99246301 -4248673 - B2_Mm2 SINE B2 -35 160 5 5 1342 975 226 4 73 chr15 99246315 99246549 -4248425 - ID_B1 SINE B4 -2 222 5 5 1342 210 154 0 0 chr15 99247222 99247261 -4247713 + T-rich Low_complexity Low_complexity 1 39 0 5 1342 273 237 0 8 chr15 99247324 99247384 -4247590 + B1F SINE Alu 48 104 -13 5 1342 221 0 35 0 chr15 99247384 99247413 -4247561 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 5 1342 644 132 0 17 chr15 99247717 99247833 -4247141 + (TTTTC)n Simple_repeat Simple_repeat 1 114 0 5 1342 940 111 7 7 chr15 99247833 99247987 -4246987 + (TTTC)n Simple_repeat Simple_repeat 2 155 0 5 1342 1109 67 0 0 chr15 99247990 99248125 -4246849 - B1_Mus2 SINE Alu -12 135 1 5 1342 231 254 55 0 chr15 99248139 99248194 -4246780 - ID2 SINE ID -20 63 6 5 1342 288 0 0 0 chr15 99248197 99248229 -4246745 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1342 210 71 0 0 chr15 99248377 99248405 -4246569 + (GGGTG)n Simple_repeat Simple_repeat 2 29 0 5 1342 226 380 99 14 chr15 99248467 99248678 -4246296 + MIR SINE MIR 2 230 -32 5 1342 259 337 11 11 chr15 99249104 99249197 -4245777 + ID_B1 SINE B4 81 173 -51 5 1342 434 292 0 0 chr15 99249114 99249220 -4245754 + PB1D10 SINE Alu 10 115 -2 5 1342 381 149 15 0 chr15 99249268 99249335 -4245639 - B1_Mur2 SINE Alu -1 148 81 5 1342 784 145 0 8 chr15 99249331 99249463 -4245511 - B1_Mus2 SINE Alu -16 131 1 5 1342 31 66 0 13 chr15 99249465 99249493 -4245481 + AT_rich Low_complexity Low_complexity 1 28 0 5 1342 1141 85 77 33 chr15 99249493 99249676 -4245298 - B2_Mm2 SINE B2 -4 191 1 5 1342 31 66 0 13 chr15 99249676 99249724 -4245250 + AT_rich Low_complexity Low_complexity 1 48 0 5 1342 472 269 104 0 chr15 99249724 99249858 -4245116 - RSINE1 SINE B4 -2 163 16 6 1342 238 308 53 53 chr15 99249876 99249989 -4244985 - PB1D7 SINE Alu -7 113 1 6 1342 738 128 0 0 chr15 99250029 99250146 -4244828 - B1_Mus1 SINE Alu 0 148 32 6 1342 449 312 42 61 chr15 99250160 99250372 -4244602 - B4A SINE B4 -67 225 18 6 1342 1343 45 33 27 chr15 99250449 99250633 -4244341 + B2_Mm1t SINE B2 1 185 -8 6 1342 180 0 0 0 chr15 99252580 99252600 -4242374 + (TA)n Simple_repeat Simple_repeat 1 20 0 6 1342 448 177 73 0 chr15 99254865 99254961 -4240013 + B1_Mur1 SINE Alu 44 146 -3 6 1342 1251 98 27 0 chr15 99258885 99259068 -4235906 - B2_Mm2 SINE B2 -2 193 6 6 1342 308 306 131 7 chr15 99259333 99259478 -4235496 + MIR SINE MIR 10 172 -90 6 1342 602 166 0 49 chr15 99260248 99260388 -4234586 + B1_Mur3 SINE Alu 17 149 0 6 1342 737 320 17 47 chr15 99261195 99261493 -4233481 - B4 SINE B4 -2 290 2 6 1342 374 363 25 45 chr15 99261806 99262005 -4232969 - MIRb SINE MIR -62 206 12 6 1342 403 265 20 0 chr15 99262772 99262874 -4232100 + PB1D7 SINE Alu 3 106 -14 6 1342 735 171 48 35 chr15 99264954 99265099 -4229875 - B1_Mur3 SINE Alu -1 148 2 6 1342 400 192 0 0 chr15 99265125 99265203 -4229771 + B3 SINE B2 2 79 -137 6 1342 299 73 0 117 chr15 99266082 99266159 -4228815 + A-rich Low_complexity Low_complexity 1 68 0 6 1342 387 41 0 0 chr15 99267647 99267696 -4227278 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1342 782 126 142 0 chr15 99267824 99267951 -4227023 - B1_Mus1 SINE Alu -3 145 1 6 1342 908 199 85 15 chr15 99267995 99268194 -4226780 + B3 SINE B2 4 216 0 6 1342 279 0 0 0 chr15 99268496 99268527 -4226447 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1342 221 307 23 0 chr15 99269053 99269141 -4225833 + (TATG)n Simple_repeat Simple_repeat 1 90 0 6 1342 251 276 92 0 chr15 99269276 99269352 -4225622 + PB1D10 SINE Alu 1 83 -34 6 1342 333 231 103 77 chr15 99269911 99270028 -4224946 + PB1D7 SINE Alu 1 120 0 6 1342 541 90 250 0 chr15 99270083 99270183 -4224791 + B1_Mus1 SINE Alu 18 142 -6 6 1342 1079 129 0 6 chr15 99270186 99270365 -4224609 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 6 1342 1429 88 0 10 chr15 99270402 99270598 -4224376 + B2_Mm2 SINE B2 2 195 0 6 1342 256 245 138 0 chr15 99270629 99270723 -4224251 + PB1D10 SINE Alu 10 116 -1 6 1342 333 0 0 0 chr15 99270903 99270940 -4224034 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1342 426 233 108 8 chr15 99272024 99272154 -4222820 + Charlie1b DNA MER1_type 189 331 -192 6 1342 615 172 69 0 chr15 99272210 99272326 -4222648 - B1_Mur1 SINE Alu -5 144 21 6 1342 494 283 66 40 chr15 99272374 99272525 -4222449 - RSINE1 SINE B4 0 165 11 6 1342 538 288 19 25 chr15 99272558 99272718 -4222256 - RSINE1 SINE B4 -3 162 4 6 1342 812 110 40 14 chr15 99273164 99273592 -4221382 + (TCTA)n Simple_repeat Simple_repeat 1 439 0 6 1342 857 144 0 103 chr15 99274008 99274163 -4220811 + B1_Mur1 SINE Alu 3 141 -8 6 1342 235 268 18 0 chr15 99274309 99274365 -4220609 - ID4_ SINE ID 0 83 27 6 1342 2166 209 103 13 chr15 99274390 99274913 -4220061 + RMER15 LTR ERVL 6 575 0 6 1342 1484 73 21 0 chr15 99274942 99275133 -4219841 + B2_Mm2 SINE B2 1 195 0 6 1342 757 175 15 0 chr15 99275200 99275354 -4219620 + RMER1B Other Other 467 684 -382 6 1342 884 140 23 107 chr15 99275361 99275577 -4219397 + RMER1B Other Other 866 1063 -3 6 1342 225 284 124 21 chr15 99275798 99275895 -4219079 + PB1D10 SINE Alu 2 108 -9 6 1342 972 293 98 20 chr15 99276008 99276457 -4218517 - L1MB8 LINE L1 -182 5996 5513 6 1342 210 118 0 0 chr15 99276464 99276498 -4218476 + (TTCC)n Simple_repeat Simple_repeat 4 37 0 6 1342 1225 62 0 0 chr15 99276498 99276644 -4218330 - B1_Mus2 SINE Alu 0 147 2 6 1342 261 109 0 21 chr15 99276757 99276804 -4218170 + B3 SINE B2 68 113 -103 6 1342 24 32 0 0 chr15 99276856 99276887 -4218087 + AT_rich Low_complexity Low_complexity 1 31 0 6 1342 1631 36 0 10 chr15 99276891 99277086 -4217888 + B2_Mm1a SINE B2 1 193 0 6 1342 341 191 16 0 chr15 99277097 99277160 -4217814 + PB1D9 SINE Alu 47 110 -10 6 1342 628 191 17 0 chr15 99277234 99277349 -4217625 + B1_Mus2 SINE Alu 31 147 0 6 1342 876 294 82 2 chr15 99277355 99277757 -4217217 + L1MA8 LINE L1 5334 5767 -524 6 1342 272 266 84 53 chr15 99277761 99277892 -4217082 + L1MA8 LINE L1 5915 6049 -242 6 1342 422 256 47 16 chr15 99277962 99278089 -4216885 + B1F SINE Alu 2 132 -17 6 1342 839 189 13 7 chr15 99278148 99278297 -4216677 + B1_Mur4 SINE Alu 1 150 0 6 1342 222 37 0 0 chr15 99278305 99278332 -4216642 + (CAAG)n Simple_repeat Simple_repeat 1 27 0 6 1342 237 424 0 0 chr15 99278418 99278595 -4216379 + (CATA)n Simple_repeat Simple_repeat 2 178 0 6 1342 879 270 30 17 chr15 99278724 99278961 -4216013 + B4A SINE B4 53 292 0 6 1342 325 299 41 0 chr15 99279376 99279495 -4215479 + MIRm SINE MIR 28 158 -118 6 1342 332 331 72 26 chr15 99280527 99280679 -4214295 + MLT1A0 LTR MaLR 1 159 -206 6 1342 1303 92 0 122 chr15 99280683 99280905 -4214069 + B2_Mm2 SINE B2 1 195 0 6 1342 387 41 0 0 chr15 99280955 99281004 -4213970 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 1342 249 342 24 105 chr15 99281369 99281493 -4213481 + PB1D10 SINE Alu 4 117 0 6 1342 429 198 0 0 chr15 99281494 99281585 -4213389 + GA-rich Low_complexity Low_complexity 3 93 0 6 1342 618 168 0 0 chr15 99281604 99281717 -4213257 + CT-rich Low_complexity Low_complexity 2 114 0 6 1342 671 141 40 32 chr15 99281789 99281914 -4213060 + B1_Mur2 SINE Alu 14 139 -10 6 1342 687 139 9 9 chr15 99282384 99282500 -4212474 - URR1B DNA MER1_type -1 224 109 6 1342 680 78 0 0 chr15 99282497 99282587 -4212387 - B2_Mm2 SINE B2 -104 91 2 6 1342 248 0 31 0 chr15 99283036 99283068 -4211906 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 6 1342 203 158 26 0 chr15 99284318 99284356 -4210618 - L2b LINE L2 -31 3344 3306 6 1342 709 160 84 46 chr15 99284693 99284824 -4210150 - B1_Mur2 SINE Alu -13 136 1 6 1342 995 129 0 7 chr15 99284870 99285011 -4209963 - B1_Mus2 SINE Alu -6 141 2 6 1342 193 274 11 77 chr15 99285011 99285102 -4209872 + MIR3 SINE MIR 122 206 -2 6 1342 459 78 0 0 chr15 99286398 99286462 -4208512 + (TG)n Simple_repeat Simple_repeat 1 64 0 6 1342 287 250 43 56 chr15 99286470 99286617 -4208357 - MIR3 SINE MIR -43 165 27 6 1342 271 207 35 0 chr15 99288783 99288841 -4206133 + PB1D9 SINE Alu 3 62 -58 6 1342 428 258 65 0 chr15 99289013 99289106 -4205868 - B1F2 SINE Alu -10 139 41 6 1342 401 104 13 0 chr15 99289568 99289645 -4205329 + (CAA)n Simple_repeat Simple_repeat 2 79 0 6 1342 189 0 0 0 chr15 99289643 99289664 -4205310 + (CCA)n Simple_repeat Simple_repeat 2 22 0 6 1342 207 0 0 0 chr15 99290135 99290158 -4204816 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 6 1342 600 155 36 42 chr15 99290172 99290297 -4204677 - B1_Mus2 SINE Alu -2 118 1 6 1342 415 260 30 0 chr15 99290739 99290839 -4204135 - B3 SINE B2 -93 123 21 6 1342 719 137 8 0 chr15 99291214 99291338 -4203636 + (TCC)n Simple_repeat Simple_repeat 3 127 0 6 1342 303 352 15 69 chr15 99291339 99291470 -4203504 + PB1 SINE Alu 2 125 -2 6 1342 406 233 0 43 chr15 99291377 99291471 -4203503 + ID_B1 SINE B4 133 222 -2 6 1342 376 224 0 0 chr15 99291480 99291547 -4203427 + ID4_ SINE ID 2 68 -15 6 1342 325 315 0 0 chr15 99291485 99291558 -4203416 + tRNA-Ala-GCY_ tRNA tRNA 1 73 -2 6 1342 345 103 35 0 chr15 99291733 99291791 -4203183 - B1F1 SINE Alu 0 149 90 6 1342 1335 159 19 5 chr15 99291792 99292007 -4202967 - URR1A DNA MER1_type 0 226 9 6 1342 378 184 92 0 chr15 99292005 99292081 -4202893 - B1_Mur3 SINE Alu -66 83 1 6 1342 579 194 102 22 chr15 99292250 99292387 -4202587 + B1_Mur1 SINE Alu 2 149 0 6 1342 1427 72 5 58 chr15 99292600 99292805 -4202169 + B2_Mm2 SINE B2 1 194 -1 6 1342 1127 66 0 7 chr15 99292809 99292947 -4202027 + B1_Mus2 SINE Alu 1 137 -10 6 1342 189 0 0 0 chr15 99292947 99292968 -4202006 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 6 1342 622 156 115 0 chr15 99293415 99293537 -4201437 + B3 SINE B2 81 216 0 6 1342 832 243 85 31 chr15 99294081 99294340 -4200634 + B4A SINE B4 2 274 -18 6 1342 348 64 0 0 chr15 99294427 99294474 -4200500 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1342 684 243 96 58 chr15 99294505 99294686 -4200288 + B4A SINE B4 44 225 -67 6 1342 450 234 116 14 chr15 99294686 99294833 -4200141 + RSINE1 SINE B4 4 165 0 6 1342 684 243 96 58 chr15 99294833 99294891 -4200083 + B4A SINE B4 226 292 0 6 1342 228 193 0 48 chr15 99294896 99295021 -4199953 + (CA)n Simple_repeat Simple_repeat 1 119 0 6 1342 289 135 23 149 chr15 99295043 99295130 -4199844 + B4A SINE B4 217 292 0 6 1342 948 84 40 60 chr15 99295233 99295384 -4199590 - B1_Mus1 SINE Alu 0 148 1 6 1342 203 264 33 11 chr15 99295431 99295523 -4199451 + (TTTA)n Simple_repeat Simple_repeat 3 96 0 6 1342 239 277 169 0 chr15 99295560 99295643 -4199331 - RSINE1 SINE B4 -31 134 38 6 1342 264 167 36 18 chr15 99295669 99295724 -4199250 - B1F1 SINE Alu -1 148 93 6 1342 351 0 0 0 chr15 99295759 99295798 -4199176 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 7 1342 457 231 16 53 chr15 99295802 99295931 -4199043 - PB1D10 SINE Alu -13 136 12 7 1342 1157 75 7 0 chr15 99295976 99296122 -4198852 - B1_Mus1 SINE Alu 0 148 2 7 1342 390 224 26 13 chr15 99296154 99296231 -4198743 - B1_Mur1 SINE Alu -42 107 30 7 1342 672 189 44 89 chr15 99296249 99296452 -4198522 - B2_Mm2 SINE B2 -1 194 1 7 1342 340 248 155 19 chr15 99296567 99296670 -4198304 + PB1D7 SINE Alu 1 117 -3 7 1342 731 88 86 34 chr15 99296733 99296850 -4198124 - B2_Mm2 SINE B2 -24 171 49 7 1342 811 116 16 0 chr15 99296873 99296994 -4197980 - B1_Mur2 SINE Alu -8 141 19 7 1342 333 264 0 33 chr15 99297348 99297438 -4197536 - PB1D10 SINE Alu -7 110 24 7 1342 1328 72 16 6 chr15 99297657 99297839 -4197135 - B2_Mm1a SINE B2 -9 184 1 7 1342 698 175 71 28 chr15 99298063 99298204 -4196770 + B1_Mur3 SINE Alu 3 149 0 7 1342 319 167 0 0 chr15 99299538 99299592 -4195382 + L1MB3 LINE L1 6089 6142 -41 7 1342 929 198 50 20 chr15 99299593 99299794 -4195180 + B3 SINE B2 2 208 -8 7 1342 232 130 41 61 chr15 99299800 99299849 -4195125 + B1_Mur2 SINE Alu 101 148 -1 7 1342 244 308 0 60 chr15 99299898 99299981 -4194993 + ID4 SINE ID 3 80 -3 7 1342 620 167 26 17 chr15 99300192 99300308 -4194666 - PB1D10 SINE Alu 0 117 1 7 1342 335 225 138 0 chr15 99301761 99301841 -4193133 - ID_B1 SINE B4 -3 221 131 7 1342 1070 45 75 0 chr15 99302491 99302625 -4192349 + B1_Mus1 SINE Alu 3 146 -2 7 1342 337 198 78 44 chr15 99302716 99302806 -4192168 - PB1D10 SINE Alu 0 117 25 7 1342 238 211 19 0 chr15 99302818 99302870 -4192104 + L1ME3B LINE L1 5915 5967 -273 7 1342 197 135 0 19 chr15 99302892 99302945 -4192029 + A-rich Low_complexity Low_complexity 2 53 0 7 1342 632 234 88 33 chr15 99303281 99303462 -4191512 - B3 SINE B2 -1 215 25 7 1342 367 289 56 56 chr15 99303487 99303648 -4191326 - MER5A1 DNA MER1_type -5 161 1 7 1342 226 196 18 73 chr15 99304050 99304105 -4190869 - ID_B1 SINE B4 0 224 173 7 1342 200 373 43 60 chr15 99305597 99305642 -4189332 + MIRm SINE MIR 159 273 -3 7 1342 256 271 69 28 chr15 99305642 99305714 -4189260 + L2b LINE L2 3296 3370 -5 7 1342 1241 242 63 7 chr15 99305835 99306105 -4188869 + B4A SINE B4 5 289 -3 7 1342 1797 123 198 0 chr15 99306192 99306510 -4188464 - ORR1C2 LTR MaLR -3 381 1 7 1342 517 252 18 9 chr15 99306744 99306856 -4188118 - ID_B1 SINE B4 -7 217 105 7 1342 237 333 101 27 chr15 99306746 99306894 -4188080 + YREP_Mm Unknown Unknown 186 344 -1468 7 1342 380 121 35 0 chr15 99306992 99307050 -4187924 - B1_Mus2 SINE Alu -9 138 79 7 1342 388 103 35 0 chr15 99307039 99307097 -4187877 - B1_Mur3 SINE Alu -9 140 81 7 1342 364 113 0 0 chr15 99307086 99307139 -4187835 - B1_Mur3 SINE Alu -9 140 88 7 1342 977 91 15 0 chr15 99307139 99307271 -4187703 - B1_Mur3 SINE Alu -15 134 1 7 1342 210 268 36 0 chr15 99307382 99307438 -4187536 + ID2 SINE ID 2 59 -24 7 1342 261 0 0 0 chr15 99307459 99307488 -4187486 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1342 974 347 140 16 chr15 99307488 99308094 -4186880 - Arthur1 DNA Tip100 -3259 688 8 7 1342 264 284 0 0 chr15 99308145 99308226 -4186748 + L1M1 LINE L1 5526 5606 -685 7 1342 624 278 12 24 chr15 99308226 99308392 -4186582 + RSINE1 SINE B4 2 165 0 7 1342 830 184 0 13 chr15 99308441 99308590 -4186384 + B1_Mur2 SINE Alu 1 147 -2 7 1342 250 192 4 0 chr15 99308635 99308692 -4186282 + PB1 SINE Alu 54 119 -8 7 1342 214 191 0 0 chr15 99308716 99308758 -4186216 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 1342 491 234 37 130 chr15 99308768 99308800 -4186174 + B4 SINE B4 77 100 -192 7 1342 180 77 0 0 chr15 99308800 99308826 -4186148 + (TGG)n Simple_repeat Simple_repeat 2 27 0 7 1342 491 234 37 130 chr15 99308826 99308955 -4186019 + B4 SINE B4 101 223 -69 7 1342 244 175 0 0 chr15 99308962 99309002 -4185972 + L1M1 LINE L1 5675 5714 -583 7 1342 203 284 0 0 chr15 99309004 99309092 -4185882 + (TA)n Simple_repeat Simple_repeat 1 88 0 7 1342 462 204 0 0 chr15 99309119 99309217 -4185757 + (TA)n Simple_repeat Simple_repeat 2 99 0 7 1342 281 282 67 17 chr15 99309268 99309387 -4185587 + L1M1 LINE L1 5739 5863 -440 7 1342 493 299 94 5 chr15 99309389 99309601 -4185373 + L1MA6 LINE L1 5937 6167 -133 7 1342 1120 213 17 10 chr15 99309909 99310175 -4184799 - ORR1C1 LTR MaLR 0 378 68 7 1342 292 186 17 0 chr15 99310175 99310293 -4184681 + GA-rich Low_complexity Low_complexity 2 121 0 7 1342 750 212 17 34 chr15 99310296 99310472 -4184502 - ORR1C1 LTR MaLR -187 187 15 7 1342 1364 66 11 0 chr15 99310541 99310723 -4184251 + B2_Mm1t SINE B2 10 193 0 7 1342 543 335 0 40 chr15 99310747 99310924 -4184050 + B4A SINE B4 49 218 -74 7 1342 376 214 414 0 chr15 99310940 99311080 -4183894 + B4 SINE B4 91 288 -4 7 1342 860 131 14 35 chr15 99311155 99311298 -4183676 + B1_Mur4 SINE Alu 11 150 0 7 1342 564 182 64 0 chr15 99311364 99311474 -4183500 + PB1D9 SINE Alu 2 118 -2 7 1342 1989 171 40 68 chr15 99311556 99311813 -4183161 - RLTR21 LTR ERVK -30 1542 1304 7 1342 483 95 0 0 chr15 99311813 99311887 -4183087 + (CA)n Simple_repeat Simple_repeat 1 74 0 7 1342 1989 171 40 68 chr15 99311887 99312056 -4182918 - RLTR21 LTR ERVK -269 1303 1129 7 1342 453 116 0 0 chr15 99312056 99312125 -4182849 + (CA)n Simple_repeat Simple_repeat 1 69 0 7 1342 6881 147 20 89 chr15 99312132 99312262 -4182712 - RLTR21 LTR ERVK -285 1287 1170 7 1342 248 111 22 0 chr15 99312262 99312307 -4182667 + (CATA)n Simple_repeat Simple_repeat 1 46 0 7 1342 6881 147 20 89 chr15 99312307 99312969 -4182005 - RLTR21 LTR ERVK -403 1169 563 7 1342 1669 15 0 5 chr15 99312969 99313166 -4181808 + L1Md_F3 LINE L1 6376 6571 -13 7 1342 6881 147 20 89 chr15 99313166 99313304 -4181670 - RLTR21 LTR ERVK -1010 562 441 7 1342 1460 73 16 0 chr15 99313304 99313495 -4181479 + B2_Mm2 SINE B2 1 194 -1 7 1342 6881 147 20 89 chr15 99313495 99313943 -4181031 - RLTR21 LTR ERVK -1132 440 2 7 1342 560 268 67 26 chr15 99313946 99314349 -4180625 + L1MD LINE L1 5175 5592 -650 7 1342 225 214 53 18 chr15 99314352 99314409 -4180565 - B1_Mm SINE Alu -1 146 88 7 1342 406 253 258 6 chr15 99314413 99314580 -4180394 - B3 SINE B2 -6 210 2 7 1342 284 222 153 27 chr15 99315241 99315352 -4179622 - MLT1A1 LTR MaLR -30 378 254 7 1342 808 154 29 7 chr15 99315460 99315597 -4179377 - B1_Mur2 SINE Alu -9 140 1 7 1342 2137 225 43 57 chr15 99316028 99316589 -4178385 + RLTR20B3 LTR ERVK 12 564 -13 7 1342 415 298 88 0 chr15 99316748 99316862 -4178112 - B1F SINE Alu -23 126 3 7 1342 285 128 0 0 chr15 99317039 99317086 -4177888 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 1342 858 275 14 29 chr15 99317146 99317356 -4177618 - B3 SINE B2 -7 209 3 7 1342 480 239 65 114 chr15 99317383 99317489 -4177485 - B4 SINE B4 -69 223 126 7 1342 2841 31 6 3 chr15 99317489 99317815 -4177159 + IAPLTR2b LTR ERVK 1 327 0 7 1342 1065 54 7 52 chr15 99317815 99317861 -4177113 - B1_Mus1 SINE Alu -107 41 1 7 1342 480 239 65 114 chr15 99317861 99317892 -4177082 - B4 SINE B4 -167 125 49 7 1342 273 267 157 96 chr15 99317878 99318044 -4176930 - B4 SINE B4 -114 178 3 7 1342 307 247 56 0 chr15 99318234 99318323 -4176651 - L1MC4a LINE L1 -475 7567 7474 7 1342 235 273 100 22 chr15 99318412 99318502 -4176472 - PB1D10 SINE Alu -2 115 19 7 1342 250 331 80 0 chr15 99318533 99318684 -4176290 - L1MC4a LINE L1 -598 7444 7282 7 1342 4122 143 52 3 chr15 99319191 99319848 -4175126 - RLTR17 LTR ERVK -3 689 1 7 1342 772 236 113 20 chr15 99320052 99320247 -4174727 - B3 SINE B2 -2 214 2 7 1342 258 230 82 74 chr15 99320250 99320343 -4174631 + L1M4 LINE L1 5638 5737 -441 7 1342 1193 50 0 7 chr15 99320343 99320480 -4174494 + B1_Mus1 SINE Alu 2 138 -10 7 1342 207 0 0 0 chr15 99320480 99320503 -4174471 + (CAA)n Simple_repeat Simple_repeat 2 24 0 7 1342 258 249 99 66 chr15 99320503 99320568 -4174406 + L1M4 LINE L1 5738 5801 -383 7 1342 770 305 16 5 chr15 99320603 99320794 -4174180 + ID_B1 SINE B4 6 198 -26 7 1342 233 321 0 0 chr15 99320864 99320945 -4174029 + L1MB8 LINE L1 6074 6154 -24 7 1342 442 284 10 0 chr15 99321022 99321124 -4173850 + PB1D10 SINE Alu 15 117 0 7 1342 679 145 8 114 chr15 99321143 99321275 -4173699 + B1_Mm SINE Alu 25 142 -5 7 1342 301 291 13 136 chr15 99321144 99321299 -4173675 + B4A SINE B4 111 246 -46 7 1342 322 134 0 29 chr15 99321299 99321368 -4173606 + A-rich Low_complexity Low_complexity 4 70 0 7 1342 307 264 10 94 chr15 99321429 99321525 -4173449 - MTE-int LTR MaLR -642 938 851 7 1342 1076 115 0 0 chr15 99321555 99321703 -4173271 - B1_Mur4 SINE Alu -1 149 2 7 1342 1344 55 77 0 chr15 99322075 99322256 -4172718 - B2_Mm2 SINE B2 0 195 1 7 1342 376 304 133 13 chr15 99322995 99323145 -4171829 + MTE-int LTR MaLR 120 287 -1293 7 1342 405 338 101 29 chr15 99323306 99323513 -4171461 - L1MC4a LINE L1 -2055 5827 5606 7 1342 232 164 15 15 chr15 99323761 99323829 -4171145 + (TG)n Simple_repeat Simple_repeat 1 68 0 7 1342 1051 168 108 42 chr15 99323896 99324108 -4170866 - URR1A DNA MER1_type 0 226 1 7 1342 296 290 50 0 chr15 99324173 99324273 -4170701 - B4A SINE B4 -105 187 83 7 1342 429 315 109 97 chr15 99324376 99324706 -4170268 - MLT1H1 LTR MaLR -11 544 211 7 1342 232 316 0 37 chr15 99325354 99325436 -4169538 + MLT1E2 LTR MaLR 546 624 -3 7 1342 3405 47 5 12 chr15 99325521 99325931 -4169043 + MTB_Mm LTR MaLR 1 407 0 7 1342 404 208 147 10 chr15 99326032 99326134 -4168840 + PB1D10 SINE Alu 1 116 -1 7 1342 28 0 0 0 chr15 99326267 99326295 -4168679 + AT_rich Low_complexity Low_complexity 1 28 0 7 1342 2271 115 102 46 chr15 99326355 99326661 -4168313 - MTC LTR MaLR -8 413 83 7 1342 1144 75 7 0 chr15 99326661 99326807 -4168167 - B1_Mus1 SINE Alu 0 148 2 7 1342 2271 115 102 46 chr15 99326807 99326891 -4168083 - MTC LTR MaLR -339 82 1 7 1342 291 320 29 0 chr15 99326931 99327034 -4167940 + MIR3 SINE MIR 55 160 -48 8 1342 203 88 0 29 chr15 99327034 99327069 -4167905 + (TCCC)n Simple_repeat Simple_repeat 2 35 0 8 1342 546 16 0 0 chr15 99329759 99329822 -4165152 + (GA)n Simple_repeat Simple_repeat 2 64 0 8 1342 228 319 20 78 chr15 99331264 99331366 -4163608 - MIRb SINE MIR -131 137 42 8 1342 181 357 102 11 chr15 99332357 99332544 -4162430 + MIRb SINE MIR 53 256 -12 8 1342 185 77 0 0 chr15 99333394 99333420 -4161554 - L2b LINE L2 -17 3358 3333 8 1342 383 288 66 33 chr15 99333521 99333643 -4161331 + RSINE1 SINE B4 3 128 -37 8 1342 351 0 0 0 chr15 99333646 99333685 -4161289 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 1342 1195 197 0 51 chr15 99334258 99334493 -4160481 - URR1A DNA MER1_type 0 226 4 8 1342 246 293 33 33 chr15 99335167 99335287 -4159687 - MIR SINE MIR -74 188 69 8 1342 283 350 43 37 chr15 99336467 99336630 -4158344 - L2b LINE L2 0 3375 3212 8 1342 238 320 160 54 chr15 99337022 99337316 -4157658 - L2b LINE L2 -787 2632 2308 8 1342 1225 55 0 0 chr15 99337319 99337465 -4157509 + B1_Mus1 SINE Alu 1 146 -2 8 1342 333 62 0 0 chr15 99337465 99337513 -4157461 + (CAAAC)n Simple_repeat Simple_repeat 2 49 0 8 1342 205 238 87 122 chr15 99337640 99337755 -4157219 - L2b LINE L2 -1349 2070 1960 8 1342 267 54 0 0 chr15 99337904 99337941 -4157033 + (T)n Simple_repeat Simple_repeat 1 37 0 8 1342 287 267 26 71 chr15 99337950 99338063 -4156911 - L2b LINE L2 -1567 1852 1745 8 1342 194 192 0 19 chr15 99338079 99338132 -4156842 + (ATG)n Simple_repeat Simple_repeat 3 54 0 8 1342 209 385 44 68 chr15 99338175 99338423 -4156551 + MIRc SINE MIR 27 268 0 8 1342 1333 173 0 30 chr15 99338935 99339168 -4155806 - URR1A DNA MER1_type 0 226 1 8 1342 196 260 20 0 chr15 99339422 99339472 -4155502 + MIRm SINE MIR 222 272 -4 8 1342 501 246 79 8 chr15 99339753 99339880 -4155094 - ID_B1 SINE B4 0 224 89 8 1342 474 18 0 0 chr15 99340017 99340072 -4154902 + (GA)n Simple_repeat Simple_repeat 2 56 0 8 1342 281 356 81 0 chr15 99340281 99340430 -4154544 + MIR SINE MIR 27 187 -75 8 1342 328 227 53 0 chr15 99340486 99340561 -4154413 + PB1D10 SINE Alu 3 81 -36 8 1342 867 90 84 123 chr15 99341448 99341651 -4153323 + B2_Mm2 SINE B2 1 195 0 8 1342 22 0 0 0 chr15 99341657 99341679 -4153295 + AT_rich Low_complexity Low_complexity 1 22 0 8 1342 350 65 0 0 chr15 99341711 99341757 -4153217 + B2_Mm2 SINE B2 47 92 -103 8 1342 510 17 0 0 chr15 99343919 99343978 -4150996 + (CA)n Simple_repeat Simple_repeat 2 60 0 8 1342 1217 62 0 0 chr15 99344608 99344754 -4150220 - B1_Mm SINE Alu 0 147 2 8 1342 374 257 8 50 chr15 99345127 99345246 -4149728 - PB1D10 SINE Alu -3 114 1 8 1342 722 267 48 65 chr15 99345281 99345573 -4149401 + B4 SINE B4 2 288 -4 8 1342 309 352 73 8 chr15 99345667 99345790 -4149184 + ID_B1 SINE B4 87 217 -7 8 1342 298 282 0 0 chr15 99345823 99345894 -4149080 - B1_Mur1 SINE Alu -7 142 72 8 1342 181 333 41 14 chr15 99345968 99346041 -4148933 - MIRm SINE MIR -152 124 50 8 1342 242 167 0 0 chr15 99346877 99346931 -4148043 + L2 LINE L2 2136 2189 -1230 8 1342 1395 80 43 0 chr15 99347817 99348004 -4146970 + B2_Mm2 SINE B2 1 195 0 8 1342 281 143 0 39 chr15 99348838 99348889 -4146085 + MIRm SINE MIR 115 163 -113 8 1342 511 291 84 9 chr15 99350168 99350404 -4144570 + MIRb SINE MIR 3 268 0 8 1342 189 0 0 0 chr15 99352213 99352234 -4142740 + (CCCCAG)n Simple_repeat Simple_repeat 3 23 0 8 1343 566 239 0 0 chr15 99352633 99352746 -4142228 - ID_B1 SINE B4 -1 223 111 8 1343 414 0 0 0 chr15 99353848 99353894 -4141080 + (GA)n Simple_repeat Simple_repeat 1 46 0 8 1343 21 57 0 0 chr15 99353960 99353995 -4140979 + AT_rich Low_complexity Low_complexity 1 35 0 8 1343 523 255 0 86 chr15 99354048 99354211 -4140763 - RSINE1 SINE B4 -13 152 4 8 1343 243 0 0 0 chr15 99354641 99354668 -4140306 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 8 1343 1029 76 8 0 chr15 99354683 99354814 -4140160 - B1_Mur4 SINE Alu -18 132 1 8 1343 183 42 0 0 chr15 99355643 99355667 -4139307 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 8 1343 1168 81 0 0 chr15 99355669 99355817 -4139157 - B1_Mus1 SINE Alu 0 148 1 8 1343 1098 102 0 7 chr15 99355927 99356075 -4138899 - B1_Mur3 SINE Alu -1 148 2 8 1343 211 259 77 66 chr15 99356079 99356170 -4138804 - MIRc SINE MIR -125 143 52 8 1343 181 344 21 21 chr15 99356307 99356402 -4138572 - MIR3 SINE MIR -5 203 109 8 1343 259 274 16 0 chr15 99357662 99357724 -4137250 + CT-rich Low_complexity Low_complexity 3 65 0 8 1343 365 264 27 26 chr15 99358914 99359055 -4135919 + MIRc SINE MIR 39 172 -104 8 1343 243 0 0 0 chr15 99359503 99359530 -4135444 + (T)n Simple_repeat Simple_repeat 1 27 0 8 1343 212 374 100 23 chr15 99359695 99359996 -4134978 + L2a LINE L2 3098 3421 -5 8 1343 1563 121 9 9 chr15 99360301 99360526 -4134448 + URR1B DNA MER1_type 1 225 0 8 1343 182 261 145 0 chr15 99361146 99361215 -4133759 + MIRm SINE MIR 93 171 -105 8 1343 224 281 36 12 chr15 99361904 99361994 -4132980 - MIRc SINE MIR -121 155 62 8 1343 495 0 0 0 chr15 99362202 99362257 -4132717 + (TTCC)n Simple_repeat Simple_repeat 3 57 0 8 1343 928 110 0 0 chr15 99362770 99362906 -4132068 - B1_Mur4 SINE Alu -6 144 9 8 1343 206 306 9 117 chr15 99363259 99363370 -4131604 + L2c LINE L2 3256 3354 -33 8 1343 325 321 75 15 chr15 99363361 99363494 -4131480 + MIRb SINE MIR 10 150 -118 8 1343 498 246 45 0 chr15 99363528 99363638 -4131336 - PB1D7 SINE Alu -5 115 1 8 1343 1420 72 0 11 chr15 99363655 99363837 -4131137 - B2_Mm2 SINE B2 -14 181 2 8 1343 237 336 50 33 chr15 99364021 99364141 -4130833 - L2c LINE L2 -3 3384 3251 8 1343 971 126 42 0 chr15 99364401 99364544 -4130430 + B1_Mur4 SINE Alu 2 150 0 8 1343 200 35 35 0 chr15 99364544 99364573 -4130401 + (CAAAAA)n Simple_repeat Simple_repeat 6 35 0 8 1343 239 128 0 0 chr15 99364589 99364628 -4130346 + B1_Mus2 SINE Alu 109 147 0 8 1343 239 169 66 33 chr15 99364632 99364693 -4130281 + Lx8 LINE L1 6400 6462 -1011 8 1343 2119 277 78 14 chr15 99364744 99365382 -4129592 + Lx8 LINE L1 6466 7144 -329 8 1343 318 257 0 28 chr15 99365674 99365746 -4129228 + RSINE1 SINE B4 3 72 -93 8 1343 270 0 0 0 chr15 99366208 99366238 -4128736 + (CA)n Simple_repeat Simple_repeat 1 30 0 8 1343 1330 63 69 0 chr15 99366374 99366548 -4128426 + B2_Mm2 SINE B2 1 186 -9 8 1343 589 58 0 23 chr15 99366548 99366636 -4128338 + (GGA)n Simple_repeat Simple_repeat 1 86 0 8 1343 180 176 0 0 chr15 99367899 99367933 -4127041 + GA-rich Low_complexity Low_complexity 2 35 0 8 1343 463 92 54 40 chr15 99368166 99368314 -4126660 + (CAGAGA)n Simple_repeat Simple_repeat 3 152 0 8 1343 33 43 0 0 chr15 99368515 99368562 -4126412 + AT_rich Low_complexity Low_complexity 1 47 0 8 1343 527 236 114 0 chr15 99368566 99368706 -4126268 + B4A SINE B4 1 156 -136 8 1343 527 88 0 11 chr15 99368707 99368799 -4126175 + (CAGC)n Simple_repeat Simple_repeat 4 94 0 8 1343 381 242 115 91 chr15 99368975 99369224 -4125750 + B4 SINE B4 53 279 -13 8 1343 857 75 22 41 chr15 99369247 99369619 -4125355 + (CA)n Simple_repeat Simple_repeat 1 364 0 8 1343 314 304 61 92 chr15 99369809 99369849 -4125125 - L1ME4a LINE L1 -5 6119 6077 8 1343 206 32 32 0 chr15 99369849 99369880 -4125094 + (TTG)n Simple_repeat Simple_repeat 2 33 0 8 1343 1127 62 0 14 chr15 99369880 99370027 -4124947 - B1_Mus1 SINE Alu -3 145 1 8 1343 314 304 61 92 chr15 99370027 99370148 -4124826 - L1ME4a LINE L1 -48 6076 5963 8 1343 869 316 16 45 chr15 99370525 99370837 -4124137 + MER33 DNA MER1_type 22 324 0 8 1343 662 194 91 23 chr15 99371292 99371424 -4123550 - B1_Mur4 SINE Alu -8 142 2 8 1343 311 353 25 0 chr15 99372312 99372431 -4122543 + MIR SINE MIR 28 149 -113 8 1343 1411 94 17 0 chr15 99372434 99372615 -4122359 + B2_Mm2 SINE B2 3 186 -9 8 1343 211 302 126 67 chr15 99372622 99372757 -4122217 + B4A SINE B4 11 153 -139 8 1343 26 0 0 0 chr15 99372949 99372975 -4121999 + AT_rich Low_complexity Low_complexity 1 26 0 8 1343 796 203 7 0 chr15 99372983 99373121 -4121853 + B1_Mur2 SINE Alu 3 141 -8 8 1343 680 268 31 5 chr15 99373180 99373371 -4121603 - B3A SINE B2 -2 196 1 8 1343 260 202 10 144 chr15 99373385 99373489 -4121485 - RSINE1 SINE B4 0 165 76 8 1343 221 275 60 36 chr15 99373567 99373650 -4121324 - B4A SINE B4 -152 140 56 8 1343 247 298 48 0 chr15 99373914 99373998 -4120976 - MIRb SINE MIR -145 123 36 8 1343 364 265 51 8 chr15 99374457 99374575 -4120399 - MIRb SINE MIR -107 161 39 8 1343 3103 67 15 5 chr15 99375425 99375817 -4119157 - MTA_Mm LTR MaLR 0 396 1 8 1343 387 258 96 24 chr15 99376901 99377068 -4117906 + MER53 DNA hAT 9 187 -6 8 1343 277 242 64 32 chr15 99377606 99377700 -4117274 - MIRb SINE MIR -137 131 35 8 1343 233 320 41 0 chr15 99378376 99378473 -4116501 + L1M2 LINE L1 4978 5078 -1065 8 1343 271 241 158 18 chr15 99378662 99378776 -4116198 + B3A SINE B2 30 159 -39 8 1343 22 0 0 0 chr15 99378781 99378803 -4116171 + AT_rich Low_complexity Low_complexity 1 22 0 8 1343 191 340 0 0 chr15 99378935 99378988 -4115986 + L4 LINE RTE 1541 1593 -436 8 1343 369 0 0 0 chr15 99379103 99379144 -4115830 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 1343 289 162 29 0 chr15 99379144 99379212 -4115762 + (TA)n Simple_repeat Simple_repeat 1 70 0 9 1343 693 268 14 28 chr15 99379256 99379467 -4115507 + B3A SINE B2 9 216 0 9 1343 488 333 0 7 chr15 99379545 99379681 -4115293 + ID_B1 SINE B4 84 218 -6 9 1343 399 319 28 83 chr15 99379691 99380016 -4114958 + L4 LINE RTE 1722 2028 -1 8 1343 218 121 0 0 chr15 99380689 99380722 -4114252 - PB1D10 SINE Alu -8 109 77 9 1343 652 155 0 128 chr15 99381558 99381706 -4113268 - B1_Mur1 SINE Alu -4 145 17 9 1343 327 233 27 184 chr15 99381589 99381736 -4113238 - B4 SINE B4 -87 205 82 9 1343 357 62 0 0 chr15 99381736 99381784 -4113190 + (TC)n Simple_repeat Simple_repeat 2 49 0 9 1343 310 252 132 28 chr15 99381798 99381904 -4113070 - PB1D10 SINE Alu 0 117 1 9 1343 711 0 0 0 chr15 99381916 99381995 -4112979 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 9 1343 378 253 0 0 chr15 99381995 99382070 -4112904 - ID2 SINE ID -7 76 2 9 1343 701 276 125 20 chr15 99382202 99382601 -4112373 - Zaphod DNA Tip100 -298 3733 3293 9 1343 917 256 10 0 chr15 99384051 99384254 -4110720 - ID_B1 SINE B4 -18 206 2 9 1343 457 327 37 70 chr15 99384254 99384284 -4110690 - Charlie1 DNA MER1_type -2547 234 215 9 1343 349 203 81 0 chr15 99384284 99384358 -4110616 + ID4_ SINE ID 4 83 0 9 1343 457 327 37 70 chr15 99384358 99384564 -4110410 - Charlie1 DNA MER1_type -2567 214 7 9 1343 246 237 0 38 chr15 99384644 99384723 -4110251 + PB1D7 SINE Alu 1 76 -44 9 1343 1351 206 101 36 chr15 99385095 99385482 -4109492 - Lx9 LINE L1 -136 7508 7097 9 1343 315 175 41 8 chr15 99385571 99385692 -4109282 + C-rich Low_complexity Low_complexity 4 128 0 9 1343 621 330 19 33 chr15 99385695 99385908 -4109066 - B4 SINE B4 -2 290 81 9 1343 210 286 0 18 chr15 99386712 99386769 -4108205 - B4 SINE B4 -207 85 30 9 1343 180 0 0 0 chr15 99386769 99386789 -4108185 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 9 1343 332 290 92 18 chr15 99386842 99386951 -4108023 - PB1 SINE Alu -8 119 3 9 1343 3419 43 0 2 chr15 99387592 99387989 -4106985 + MTA_Mm LTR MaLR 1 396 0 9 1343 183 80 0 0 chr15 99388174 99388199 -4106775 + (T)n Simple_repeat Simple_repeat 1 25 0 9 1343 269 282 60 52 chr15 99388314 99388330 -4106644 + B1F SINE Alu 32 148 -1 9 1343 422 270 0 0 chr15 99388330 99388430 -4106544 + ID_B1 SINE B4 123 222 -2 9 1343 1059 301 115 67 chr15 99388430 99389306 -4105668 - L1MB8 LINE L1 -53 6125 5211 9 1343 584 221 8 8 chr15 99389324 99389452 -4105522 - ID_B1 SINE B4 -2 222 95 9 1343 460 268 8 30 chr15 99389505 99389636 -4105338 - B3A SINE B2 -3 195 68 9 1343 324 0 0 0 chr15 99389763 99389799 -4105175 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 1343 1191 50 0 0 chr15 99389909 99390048 -4104926 - B1_Mus1 SINE Alu -9 139 1 9 1343 283 277 11 65 chr15 99390461 99390586 -4104388 - BC1_Mm scRNA scRNA -28 124 5 9 1343 261 83 0 0 chr15 99390910 99390946 -4104028 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 9 1343 242 250 99 27 chr15 99392125 99392236 -4102738 - L1ME3A LINE L1 -105 6068 5950 9 1343 270 183 0 0 chr15 99392293 99392364 -4102610 + (TG)n Simple_repeat Simple_repeat 1 71 0 9 1343 375 258 139 103 chr15 99392366 99392647 -4102327 - B4 SINE B4 0 292 2 9 1343 603 254 78 62 chr15 99392777 99392970 -4102004 - B3A SINE B2 0 198 3 9 1343 802 109 80 7 chr15 99393030 99393168 -4101806 + URR1B DNA MER1_type 78 225 0 9 1343 237 248 129 57 chr15 99393182 99393306 -4101668 - Charlie19a DNA Charlie -102 284 152 9 1343 225 83 0 0 chr15 99393691 99393727 -4101247 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 9 1343 242 116 23 0 chr15 99394251 99394294 -4100680 + (TG)n Simple_repeat Simple_repeat 1 44 0 9 1343 201 39 0 0 chr15 99394400 99394426 -4100548 + (CAGAG)n Simple_repeat Simple_repeat 1 26 0 9 1343 732 317 60 0 chr15 99395659 99395926 -4099048 - L1MB5 LINE L1 -30 6150 5869 9 1343 718 161 7 7 chr15 99395954 99396092 -4098882 - ORR1A1 LTR MaLR -208 138 1 9 1343 366 228 10 52 chr15 99396095 99396192 -4098782 - Lx9 LINE L1 -209 7435 7343 9 1343 3854 174 83 3 chr15 99396190 99396748 -4098226 - Lx9 LINE L1 -489 7155 6559 9 1343 369 0 0 0 chr15 99396748 99396789 -4098185 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 1343 3854 174 83 3 chr15 99396789 99396963 -4098011 - Lx9 LINE L1 -1086 6558 6365 9 1343 2656 85 54 0 chr15 99396975 99397362 -4097612 - RMER19A LTR ERVK 0 737 330 9 1343 1026 87 116 0 chr15 99397361 99397533 -4097441 + ORR1A4 LTR MaLR 138 329 0 9 1343 290 211 0 0 chr15 99397545 99397597 -4097377 - RSINE1 SINE B4 -98 67 16 9 1343 229 89 44 0 chr15 99397744 99397789 -4097185 + (TTCTG)n Simple_repeat Simple_repeat 4 50 0 9 1343 226 346 0 0 chr15 99397966 99398047 -4096927 + L2a LINE L2 3334 3414 -12 9 1343 266 187 88 2 chr15 99398751 99398814 -4096160 + MIRc SINE MIR 34 103 -165 9 1343 286 312 30 50 chr15 99398815 99398916 -4096058 - L2c LINE L2 0 3387 3289 9 1343 366 23 0 0 chr15 99399501 99399544 -4095430 + (CCA)n Simple_repeat Simple_repeat 3 45 0 9 1343 196 317 124 9 chr15 99399672 99399777 -4095197 - MIRm SINE MIR 0 276 160 9 1343 496 161 47 31 chr15 99400577 99400679 -4094295 + RMER17C LTR ERVK 80 183 -227 9 1343 372 43 0 0 chr15 99400679 99400725 -4094249 + (TCC)n Simple_repeat Simple_repeat 3 48 0 9 1343 496 161 47 31 chr15 99400725 99400814 -4094160 + RMER17C LTR ERVK 184 274 -136 9 1343 651 189 33 65 chr15 99400877 99400905 -4094069 - B1_Mur1 SINE Alu 0 149 124 9 1343 1450 159 209 63 chr15 99400905 99401095 -4093879 + ORR1C2 LTR MaLR 1 171 -213 9 1343 591 15 0 0 chr15 99401095 99401163 -4093811 + (TC)n Simple_repeat Simple_repeat 1 68 0 9 1343 1450 159 209 63 chr15 99401163 99401307 -4093667 + ORR1C2 LTR MaLR 172 383 -1 9 1343 651 189 33 65 chr15 99401307 99401431 -4093543 - B1_Mur1 SINE Alu -26 123 2 9 1343 437 347 7 14 chr15 99401568 99401714 -4093260 - B1_Mur1 SINE Alu -2 147 3 9 1343 437 296 69 23 chr15 99401788 99401961 -4093013 + B3A SINE B2 4 184 -14 9 1343 1019 165 35 15 chr15 99401996 99402199 -4092775 - B3 SINE B2 0 216 10 9 1343 522 210 0 0 chr15 99402213 99402332 -4092642 + (TA)n Simple_repeat Simple_repeat 2 120 0 9 1343 493 244 8 34 chr15 99402337 99402351 -4092623 - B1_Mur4 SINE Alu -15 135 121 9 1343 405 0 0 0 chr15 99402351 99402396 -4092578 + (TC)n Simple_repeat Simple_repeat 2 46 0 9 1343 493 244 8 34 chr15 99402396 99402500 -4092474 - B1_Mur4 SINE Alu -30 120 20 9 1343 586 151 122 9 chr15 99402527 99402634 -4092340 - PB1D9 SINE Alu 0 120 2 9 1343 818 242 42 10 chr15 99402682 99402874 -4092100 + B3 SINE B2 17 214 -2 9 1343 457 233 59 15 chr15 99402898 99403033 -4091941 + MIR SINE MIR 48 188 -74 9 1343 2182 106 115 6 chr15 99403038 99403369 -4091605 - ORR1B2 LTR MaLR 0 367 1 9 1343 237 232 26 104 chr15 99403491 99403568 -4091406 + Kanga1 DNA Tc2 87 157 -1588 9 1343 453 240 9 48 chr15 99403643 99403748 -4091226 + PB1D10 SINE Alu 16 116 -1 9 1343 1902 270 106 40 chr15 99403770 99404395 -4090579 + Lx8 LINE L1 6634 7299 -174 9 1343 328 302 115 85 chr15 99404520 99404780 -4090194 + Kanga1 DNA Tc2 253 521 -1224 9 1343 615 279 25 0 chr15 99404875 99405033 -4089941 + RSINE1 SINE B4 4 165 0 9 1343 1449 243 65 32 chr15 99405609 99406073 -4088901 - RCHARR1 DNA MER1_type -15 959 481 9 1343 525 280 22 36 chr15 99406107 99406244 -4088730 - B1F SINE Alu -3 146 12 9 1343 1477 248 55 71 chr15 99406282 99406759 -4088215 - RCHARR1 DNA MER1_type -469 505 37 9 1343 657 119 0 0 chr15 99407101 99407202 -4087772 + (CTG)n Simple_repeat Simple_repeat 1 101 0 9 1343 275 256 12 49 chr15 99407202 99407284 -4087690 - ID4 SINE ID -4 79 1 9 1343 249 305 0 87 chr15 99408150 99408265 -4086709 + MIR SINE MIR 35 139 -69 9 1343 182 171 24 0 chr15 99409493 99409534 -4085440 + GA-rich Low_complexity Low_complexity 2 43 0 9 1343 1156 45 0 0 chr15 99412895 99413029 -4081945 - B1_Mus1 SINE Alu -10 138 5 9 1343 389 66 0 16 chr15 99413046 99413108 -4081866 + (TATG)n Simple_repeat Simple_repeat 3 63 0 9 1343 928 67 52 0 chr15 99413108 99413242 -4081732 - B2_Mm2 SINE B2 -47 148 8 9 1343 279 79 0 0 chr15 99413243 99413281 -4081693 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 9 1343 642 190 72 0 chr15 99413281 99413420 -4081554 - B1_Mur2 SINE Alu 0 149 2 9 1343 308 288 162 11 chr15 99413900 99414073 -4080901 - MIRb SINE MIR -24 244 40 9 1343 898 41 66 0 chr15 99416589 99416711 -4078263 + B1_Mus2 SINE Alu 10 139 -8 9 1343 258 32 0 0 chr15 99416711 99416742 -4078232 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 9 1343 447 245 100 31 chr15 99416800 99416960 -4078014 - MIRc SINE MIR -79 189 19 9 1343 299 25 0 24 chr15 99417798 99417839 -4077135 + (TTA)n Simple_repeat Simple_repeat 1 40 0 9 1343 1148 172 39 25 chr15 99417841 99418044 -4076930 - B3 SINE B2 -6 210 5 9 1343 709 193 56 21 chr15 99419236 99419379 -4075595 - B1_Mur1 SINE Alu 0 149 2 9 1343 463 192 0 0 chr15 99419406 99419479 -4075495 - ID4_ SINE ID -8 75 3 9 1343 224 343 6 23 chr15 99420496 99420669 -4074305 + GA-rich Low_complexity Low_complexity 2 171 0 9 1343 47 102 0 0 chr15 99421376 99421542 -4073432 + GC_rich Low_complexity Low_complexity 1 166 0 9 1343 206 222 0 18 chr15 99421631 99421686 -4073288 + (CCG)n Simple_repeat Simple_repeat 1 54 0 9 1343 837 141 34 47 chr15 99426016 99426165 -4068809 - B1_Mus1 SINE Alu 0 148 2 9 1343 490 189 34 67 chr15 99428907 99429026 -4065948 + RSINE1 SINE B4 7 121 -44 9 1343 1466 68 10 5 chr15 99429105 99429297 -4065677 + B2_Mm2 SINE B2 1 193 -2 9 1343 23 0 0 0 chr15 99429297 99429320 -4065654 + AT_rich Low_complexity Low_complexity 1 23 0 9 1343 974 106 0 14 chr15 99429326 99429469 -4065505 + B1_Mus2 SINE Alu 5 145 -2 9 1343 300 50 0 91 chr15 99429469 99429535 -4065439 + (CAAA)n Simple_repeat Simple_repeat 1 60 0 9 1343 183 80 0 0 chr15 99430447 99430472 -4064502 + (TGGGGG)n Simple_repeat Simple_repeat 3 27 0 1 1343 1205 14 0 7 chr15 99432487 99432631 -4062343 + (GGGAGA)n Simple_repeat Simple_repeat 3 145 0 1 1343 225 221 0 122 chr15 99434958 99435154 -4059820 + C-rich Low_complexity Low_complexity 2 173 0 1 1343 216 272 24 36 chr15 99435770 99435854 -4059120 + MIRb SINE MIR 112 194 -74 1 1343 318 132 0 0 chr15 99435995 99436048 -4058926 + (GA)n Simple_repeat Simple_repeat 1 53 0 1 1343 822 110 0 0 chr15 99436538 99436684 -4058290 + (TG)n Simple_repeat Simple_repeat 2 147 0 1 1343 276 277 0 0 chr15 99436903 99436968 -4058006 + L2c LINE L2 3321 3385 -2 1 1343 2198 184 83 75 chr15 99437169 99437262 -4057712 + RLTR18B LTR ERVK 1 95 -417 1 1343 915 111 35 0 chr15 99437262 99437406 -4057568 + B1_Mur4 SINE Alu 1 149 -1 1 1343 2198 184 83 75 chr15 99437406 99437817 -4057157 + RLTR18B LTR ERVK 96 509 -3 1 1343 682 238 14 0 chr15 99438694 99438837 -4056137 + ID_B1 SINE B4 2 146 -78 1 1343 398 215 0 48 chr15 99438838 99438921 -4056053 - PB1D7 SINE Alu -4 116 38 1 1343 255 267 0 0 chr15 99439152 99439227 -4055747 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 1343 272 290 151 0 chr15 99439449 99439542 -4055432 + PB1D10 SINE Alu 1 107 -10 1 1343 201 39 0 0 chr15 99439543 99439569 -4055405 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1343 1238 75 110 0 chr15 99440189 99440362 -4054612 - B2_Mm2 SINE B2 -2 193 2 1 1343 234 282 23 23 chr15 99440586 99440673 -4054301 + B4A SINE B4 71 157 -135 1 1343 310 278 62 23 chr15 99440602 99440731 -4054243 + FAM SINE Alu 137 270 -41 1 1343 1465 80 5 0 chr15 99440869 99441057 -4053917 - B2_Mm1a SINE B2 -4 189 1 1 1343 205 143 39 39 chr15 99441254 99441305 -4053669 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 1 1343 274 254 16 0 chr15 99442422 99442497 -4052477 - B1F SINE Alu -57 92 14 1 1343 1492 239 27 32 chr15 99442900 99443276 -4051698 - ORR1D1 LTR MaLR 0 374 1 1 1343 217 86 138 0 chr15 99443288 99443360 -4051614 + (TTGG)n Simple_repeat Simple_repeat 1 81 0 1 1343 1190 55 0 20 chr15 99443362 99443511 -4051463 - B1_Mus2 SINE Alu 0 147 2 1 1343 1129 95 0 20 chr15 99446357 99446507 -4048467 + B1_Mus1 SINE Alu 2 148 0 1 1343 346 115 30 35 chr15 99446514 99446609 -4048365 - B2_Mm2 SINE B2 -13 182 47 1 1343 1340 85 11 0 chr15 99446655 99446831 -4048143 - B2_Mm1t SINE B2 -14 179 2 1 1343 663 217 126 37 chr15 99446894 99447085 -4047889 - B3 SINE B2 -7 209 2 1 1343 242 188 0 0 chr15 99447130 99447178 -4047796 - ID4_ SINE ID -33 50 3 1 1343 225 284 66 26 chr15 99447425 99447501 -4047473 + MIR SINE MIR 31 109 -99 1 1343 651 269 66 5 chr15 99447607 99447805 -4047169 + B3 SINE B2 1 210 -6 1 1343 694 302 19 34 chr15 99447985 99448191 -4046783 + ID_B1 SINE B4 21 223 -1 1 1343 23 0 0 0 chr15 99448455 99448478 -4046496 + AT_rich Low_complexity Low_complexity 1 23 0 1 1343 366 327 19 0 chr15 99449218 99449322 -4045652 + MER44D DNA MER2_type 11 116 -589 1 1343 421 268 132 16 chr15 99449507 99449636 -4045338 + B1F SINE Alu 6 149 0 1 1343 1192 55 14 0 chr15 99449814 99449959 -4045015 + B1_Mus2 SINE Alu 1 147 0 1 1343 270 136 0 0 chr15 99450690 99450734 -4044240 + (T)n Simple_repeat Simple_repeat 1 44 0 1 1343 355 225 150 61 chr15 99451938 99452085 -4042889 + RSINE1 SINE B4 4 163 -2 1 1343 277 260 23 125 chr15 99452277 99452365 -4042609 - B1F1 SINE Alu -50 99 21 1 1343 405 39 0 0 chr15 99452583 99452634 -4042340 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1343 480 258 10 0 chr15 99453170 99453267 -4041707 + RSINE1 SINE B4 62 159 -6 1 1343 1441 65 38 0 chr15 99453369 99453554 -4041420 + B2_Mm2 SINE B2 4 195 0 1 1343 1150 65 0 0 chr15 99453608 99453746 -4041228 + B1_Mus1 SINE Alu 4 141 -7 1 1343 309 268 60 12 chr15 99453812 99453895 -4041079 - ID_B1 SINE B4 -10 214 128 1 1343 233 166 199 6 chr15 99454178 99454278 -4040696 - B1_Mus2 SINE Alu -23 126 1 1 1343 221 292 133 11 chr15 99455052 99455142 -4039832 - L2a LINE L2 -24 3402 3302 1 1343 394 314 16 8 chr15 99455281 99455403 -4039571 - ID_B1 SINE B4 -7 217 95 1 1343 310 68 0 22 chr15 99455560 99455605 -4039369 + B2_Mm2 SINE B2 2 45 -150 1 1343 857 175 7 0 chr15 99455776 99455913 -4039061 + B1_Mus1 SINE Alu 1 138 -10 1 1343 198 0 0 0 chr15 99455913 99455935 -4039039 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1 1343 570 251 147 5 chr15 99456257 99456441 -4038533 - B3 SINE B2 -6 210 1 1 1343 790 243 36 26 chr15 99457124 99457318 -4037656 + B3A SINE B2 1 196 -2 1 1343 315 135 120 13 chr15 99457394 99457469 -4037505 + ID_B1 SINE B4 90 172 -52 1 1343 1270 27 0 13 chr15 99457546 99457695 -4037279 - B1_Mus2 SINE Alu 0 147 1 1 1343 21 26 0 26 chr15 99458314 99458334 -4036640 + AT_rich Low_complexity Low_complexity 1 20 0 1 1343 949 139 0 14 chr15 99458334 99458480 -4036494 + B1_Mus2 SINE Alu 4 147 0 1 1343 21 26 0 26 chr15 99458480 99458498 -4036476 + AT_rich Low_complexity Low_complexity 1 18 0 1 1343 216 0 0 0 chr15 99458658 99458682 -4036292 + (CGA)n Simple_repeat Simple_repeat 2 25 0 1 1343 34 0 0 0 chr15 99458764 99458798 -4036176 + AT_rich Low_complexity Low_complexity 1 34 0 1 1343 279 51 0 0 chr15 99458798 99458807 -4036167 + (T)n Simple_repeat Simple_repeat 1 9 0 1 1343 1194 68 0 20 chr15 99458807 99458957 -4036017 - B1_Mus2 SINE Alu 0 147 1 1 1343 279 51 0 0 chr15 99458957 99458986 -4035988 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1343 537 231 28 0 chr15 99459439 99459547 -4035427 + PB1D9 SINE Alu 5 115 -5 1 1343 321 194 0 0 chr15 99459584 99459646 -4035328 - Lx8 LINE L1 -269 7204 7143 1 1343 359 222 10 72 chr15 99459686 99459783 -4035191 + Lx8 LINE L1 7259 7349 -124 1 1343 732 283 118 61 chr15 99459890 99460500 -4034474 + L1MB8 LINE L1 5490 6134 -44 1 1343 247 222 111 0 chr15 99460504 99460555 -4034419 + B1_Mus1 SINE Alu 1 57 -91 1 1343 511 305 23 0 chr15 99460555 99460683 -4034291 + B3A SINE B2 1 131 -67 1 1343 368 167 0 0 chr15 99460738 99460792 -4034182 + B2_Mm2 SINE B2 4 57 -138 1 1343 389 197 14 0 chr15 99460791 99460862 -4034112 + RSINE1 SINE B4 22 93 -72 1 1343 1257 103 0 49 chr15 99460920 99461124 -4033850 + B2_Mm2 SINE B2 2 195 0 1 1343 458 280 27 34 chr15 99461181 99461329 -4033645 + ID_B1 SINE B4 78 224 0 1 1343 678 160 39 23 chr15 99461202 99461330 -4033644 + B1_Mus1 SINE Alu 19 148 0 1 1343 360 267 11 0 chr15 99461405 99461495 -4033479 + PB1D7 SINE Alu 23 113 -7 1 1343 288 0 0 0 chr15 99461741 99461773 -4033201 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1343 682 251 26 68 chr15 99462163 99462355 -4032619 - B3 SINE B2 0 216 33 1 1343 300 269 66 19 chr15 99462359 99462465 -4032509 - B1F SINE Alu -19 130 20 1 1343 810 158 20 40 chr15 99462821 99462973 -4032001 - B1_Mur2 SINE Alu 0 149 1 1 1343 296 246 34 39 chr15 99463726 99463854 -4031120 + B4 SINE B4 31 159 -6 1 1343 218 215 308 0 chr15 99463870 99463935 -4031039 - B1_Mus2 SINE Alu -61 86 2 1 1343 584 291 38 24 chr15 99464051 99464262 -4030712 - B3 SINE B2 0 216 3 1 1343 342 129 0 0 chr15 99464395 99464457 -4030517 + (A)n Simple_repeat Simple_repeat 1 62 0 1 1343 263 277 107 11 chr15 99464493 99464604 -4030370 + PB1D10 SINE Alu 3 127 -22 1 1343 1547 43 11 5 chr15 99465604 99465791 -4029183 + B2_Mm2 SINE B2 2 189 -6 1 1343 264 224 14 29 chr15 99466166 99466235 -4028739 + B1_Mur2 SINE Alu 81 148 -1 1 1343 292 309 203 0 chr15 99466949 99467072 -4027902 - ID_B1 SINE B4 -14 210 63 1 1343 307 305 38 0 chr15 99467127 99467232 -4027742 + PB1D10 SINE Alu 1 109 -8 1 1343 384 302 128 12 chr15 99467251 99467415 -4027559 + B3A SINE B2 1 183 -15 1 1343 1237 112 21 0 chr15 99468847 99468875 -4026099 - B2_Mm1a SINE B2 0 193 162 1 1343 336 64 0 0 chr15 99468875 99468922 -4026052 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 1 1343 1237 112 21 0 chr15 99468922 99469081 -4025893 - B2_Mm1a SINE B2 -32 161 3 1 1343 437 273 0 35 chr15 99469110 99469224 -4025750 + PB1D10 SINE Alu 2 111 -6 1 1343 1273 98 0 102 chr15 99469297 99469331 -4025643 - B2_Mm2 SINE B2 -1 194 168 1 1343 1224 48 7 0 chr15 99469331 99469478 -4025496 + B1_Mus1 SINE Alu 1 148 0 1 1343 1273 98 0 102 chr15 99469478 99469658 -4025316 - B2_Mm2 SINE B2 -28 167 2 1 1343 1230 48 0 0 chr15 99470782 99470928 -4024046 + B1_Mus2 SINE Alu 2 147 0 1 1343 213 121 0 0 chr15 99470928 99470961 -4024013 + (A)n Simple_repeat Simple_repeat 1 33 0 1 1343 1124 105 0 0 chr15 99471435 99471578 -4023396 + B1_Mus1 SINE Alu 1 143 -5 1 1343 219 103 0 0 chr15 99471579 99471618 -4023356 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 1 1343 1059 116 0 7 chr15 99471632 99471780 -4023194 + B1_Mur4 SINE Alu 1 147 -3 1 1343 217 158 0 26 chr15 99471780 99471819 -4023155 + GA-rich Low_complexity Low_complexity 1 38 0 1 1343 851 156 8 0 chr15 99471925 99472053 -4022921 + B3 SINE B2 2 130 -86 1 1343 384 314 71 112 chr15 99472053 99472122 -4022852 + ID_B1 SINE B4 2 190 -34 1 1343 294 220 82 4 chr15 99472143 99472233 -4022741 + PB1D7 SINE Alu 1 101 -19 1 1343 444 109 313 43 chr15 99472240 99472355 -4022619 - B2_Mm1t SINE B2 0 193 48 1 1343 216 195 24 0 chr15 99472319 99472360 -4022614 - B4 SINE B4 -210 82 41 1 1343 1366 74 11 0 chr15 99472383 99472559 -4022415 - B2_Mm1t SINE B2 -14 179 2 1 1343 431 71 157 0 chr15 99472719 99472789 -4022185 + B2_Mm1t SINE B2 99 179 -14 1 1343 356 97 313 26 chr15 99472802 99472917 -4022057 + B2_Mm2 SINE B2 47 194 -1 1 1343 197 122 0 47 chr15 99472918 99472961 -4022013 + GA-rich Low_complexity Low_complexity 1 41 0 1 1343 373 281 12 10 chr15 99472985 99473131 -4021843 + B3A SINE B2 26 168 -48 1 1343 201 74 0 0 chr15 99473604 99473631 -4021343 + (C)n Simple_repeat Simple_repeat 1 27 0 1 1343 604 194 0 28 chr15 99473691 99473797 -4021177 - PB1D10 SINE Alu -2 115 13 1 1343 809 175 35 7 chr15 99473829 99473973 -4021001 + B1_Mus1 SINE Alu 1 148 0 1 1343 1193 28 7 14 chr15 99474187 99474331 -4020643 - B1_Mm SINE Alu 0 147 5 1 1343 247 247 260 0 chr15 99475686 99475700 -4019274 - B1_Mur3 SINE Alu -51 98 48 1 1343 251 189 132 0 chr15 99475700 99475753 -4019221 - MT2B LTR ERVL -366 235 176 1 1343 330 295 48 0 chr15 99475779 99475884 -4019090 + PB1D10 SINE Alu 4 113 -4 1 1343 236 242 48 0 chr15 99475937 99475999 -4018975 + MLT1A0 LTR MaLR 15 79 -329 1 1343 385 300 153 0 chr15 99476011 99476161 -4018813 + MLT1A0 LTR MaLR 134 306 -59 1 1343 274 247 37 49 chr15 99476164 99476245 -4018729 + B4A SINE B4 1 80 -212 1 1343 460 149 102 11 chr15 99476455 99476543 -4018431 + PB1D9 SINE Alu 24 119 -1 1 1343 287 255 210 102 chr15 99476457 99476614 -4018360 + B4 SINE B4 111 284 -8 1 1343 260 250 17 0 chr15 99476614 99476674 -4018300 + MLT1A0 LTR MaLR 340 400 -8 1 1343 400 250 21 22 chr15 99476758 99476876 -4018098 - B1F SINE Alu -3 114 1 1 1343 837 168 21 14 chr15 99477324 99477469 -4017505 - B1_Mur1 SINE Alu -3 146 1 1 1343 225 280 0 0 chr15 99477469 99477519 -4017455 - B4A SINE B4 -159 133 84 1 1343 207 0 0 0 chr15 99479290 99479313 -4015661 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1343 198 264 172 21 chr15 99480126 99480219 -4014755 + L2a LINE L2 3186 3292 -134 1 1343 369 269 136 96 chr15 99480413 99480557 -4014417 + RMER5 LTR ERV1 53 219 -315 1 1343 761 167 26 65 chr15 99480557 99480711 -4014263 + B1_Mur4 SINE Alu 3 150 0 1 1343 369 269 136 96 chr15 99480711 99480817 -4014157 + RMER5 LTR ERV1 220 313 -221 1 1343 629 227 80 132 chr15 99480912 99481125 -4013849 + ID_B1 SINE B4 12 213 -11 1 1343 219 216 0 0 chr15 99481224 99481261 -4013713 + polypyrimidine Low_complexity Low_complexity 4 40 0 1 1343 270 281 157 7 chr15 99481263 99481403 -4013571 - RMER5 LTR ERV1 -4 530 370 1 1343 558 234 75 94 chr15 99481404 99481616 -4013358 - RMER5 LTR ERV1 -278 256 49 1 1343 186 43 0 0 chr15 99481897 99481920 -4013054 + (CTCG)n Simple_repeat Simple_repeat 4 26 0 1 1343 180 264 101 89 chr15 99482503 99482661 -4012313 - L2a LINE L2 -3 3423 3264 1 1343 358 195 142 25 chr15 99482942 99483061 -4011913 + B1_Mur4 SINE Alu 8 140 -9 1 1343 332 267 75 9 chr15 99483100 99483206 -4011768 + PB1D10 SINE Alu 5 117 0 1 1343 242 289 121 95 chr15 99483206 99483494 -4011480 + L2b LINE L2 2815 3128 -247 1 1343 21 0 0 0 chr15 99483494 99483515 -4011459 + AT_rich Low_complexity Low_complexity 1 21 0 1 1344 237 284 15 0 chr15 99484128 99484195 -4010779 + MIRb SINE MIR 17 84 -184 1 1344 188 250 82 16 chr15 99484973 99485034 -4009940 + MIRb SINE MIR 172 236 -32 1 1344 222 317 137 10 chr15 99485253 99485355 -4009619 + B4 SINE B4 53 167 -125 1 1344 488 198 151 0 chr15 99485285 99485391 -4009583 + B1_Mur2 SINE Alu 7 128 -21 1 1344 700 192 0 0 chr15 99486057 99486177 -4008797 - PB1D9 SINE Alu 0 120 1 1 1344 327 25 0 0 chr15 99486440 99486480 -4008494 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1344 37 19 0 18 chr15 99487791 99487809 -4007165 + AT_rich Low_complexity Low_complexity 1 18 0 1 1344 1122 71 7 7 chr15 99487809 99487951 -4007023 + B1_Mus1 SINE Alu 2 143 -5 1 1344 37 19 0 18 chr15 99487951 99487987 -4006987 + AT_rich Low_complexity Low_complexity 1 36 0 1 1344 609 239 89 75 chr15 99487989 99488202 -4006772 - B3 SINE B2 0 216 1 1 1344 1058 91 7 0 chr15 99488223 99488366 -4006608 - B1_Mur3 SINE Alu -1 148 5 1 1344 228 262 14 110 chr15 99488624 99488641 -4006333 - ZP3AR Satellite Satellite -2 210 149 1 1344 244 231 19 0 chr15 99488641 99488693 -4006281 - ID4 SINE ID -30 53 1 1 1344 27 29 0 0 chr15 99488699 99488733 -4006241 + GC_rich Low_complexity Low_complexity 1 34 0 1 1344 202 244 119 24 chr15 99488915 99488999 -4005975 + L2c LINE L2 3073 3164 -223 1 1344 2297 126 5 97 chr15 99489022 99489443 -4005531 + MTC LTR MaLR 40 421 0 1 1344 388 296 10 118 chr15 99489697 99489767 -4005207 - MLT1F2 LTR MaLR -1 559 500 1 1344 1422 85 0 5 chr15 99489767 99489956 -4005018 + B2_Mm2 SINE B2 3 190 -5 1 1344 388 296 10 118 chr15 99489956 99490088 -4004886 - MLT1F2 LTR MaLR -61 499 379 1 1344 211 255 0 21 chr15 99490108 99490156 -4004818 - PB1 SINE Alu -29 98 52 1 1344 1323 74 0 73 chr15 99490188 99490203 -4004771 - B2_Mm2 SINE B2 -5 190 176 1 1344 315 0 0 0 chr15 99490203 99490238 -4004736 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1 1344 1241 35 0 0 chr15 99490243 99490384 -4004590 - B1_Mm SINE Alu -6 141 1 1 1344 1323 74 0 73 chr15 99490384 99490567 -4004407 - B2_Mm2 SINE B2 -21 174 1 1 1344 500 275 63 0 chr15 99490619 99490761 -4004213 + RSINE1 SINE B4 15 165 0 1 1344 180 111 0 0 chr15 99490790 99490817 -4004157 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 1 1344 217 370 21 48 chr15 99491880 99492025 -4002949 - B4A SINE B4 -64 228 88 1 1344 235 333 31 70 chr15 99491922 99492051 -4002923 - MT2B2 LTR ERVL -323 261 138 1 1344 189 0 0 0 chr15 99492745 99492766 -4002208 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1344 1653 31 0 5 chr15 99494046 99494240 -4000734 + B2_Mm1t SINE B2 1 193 0 1 1344 276 271 0 28 chr15 99494290 99494362 -4000612 + C-rich Low_complexity Low_complexity 1 70 0 1 1344 201 236 17 52 chr15 99494434 99494492 -4000482 + L2a LINE L2 3287 3342 -84 1 1344 344 152 0 15 chr15 99495609 99495676 -3999298 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 1344 219 211 0 0 chr15 99495676 99495714 -3999260 + (CG)n Simple_repeat Simple_repeat 2 39 0 1 1344 1265 82 53 0 chr15 99497479 99497649 -3997325 - B2_Mm2 SINE B2 -16 179 1 1 1344 973 254 9 18 chr15 99498042 99498259 -3996715 + B3 SINE B2 1 215 -1 1 1344 789 192 20 14 chr15 99498285 99498433 -3996541 + B1_Mur1 SINE Alu 1 149 0 1 1344 347 195 0 94 chr15 99498485 99498570 -3996404 + MT2B LTR ERVL 188 264 -337 1 1344 911 36 0 0 chr15 99498495 99498605 -3996369 + B1_Mm SINE Alu 38 147 0 1 1344 1668 36 0 0 chr15 99498607 99498799 -3996175 + B2_Mm1a SINE B2 1 192 -1 1 1344 268 345 94 35 chr15 99498971 99499172 -3995802 - MIRb SINE MIR -43 225 13 1 1344 356 0 23 0 chr15 99499913 99499957 -3995017 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1344 279 133 0 0 chr15 99500606 99500651 -3994323 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1344 254 132 19 0 chr15 99500765 99500818 -3994156 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1344 23 0 0 0 chr15 99500931 99500954 -3994020 + GC_rich Low_complexity Low_complexity 1 23 0 3 1344 420 20 0 0 chr15 99501588 99501637 -3993337 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1344 216 0 0 0 chr15 99502887 99502911 -3992063 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1344 1162 62 7 0 chr15 99502913 99503058 -3991916 - B1_Mm SINE Alu -1 146 1 6 1344 307 308 120 27 chr15 99503840 99503990 -3990984 + MER5A1 DNA MER1_type 1 164 -2 7 1344 237 234 0 0 chr15 99504037 99504084 -3990890 + (CATG)n Simple_repeat Simple_repeat 3 49 0 8 1344 277 284 147 0 chr15 99504558 99504660 -3990314 + PB1D10 SINE Alu 1 117 0 9 1344 238 287 29 96 chr15 99504793 99504897 -3990077 + MT2B2 LTR ERVL 155 251 -333 1 1344 450 192 19 57 chr15 99504817 99504922 -3990052 + PB1D10 SINE Alu 17 117 0 1 1344 320 0 25 0 chr15 99504923 99504963 -3990011 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1344 269 334 25 72 chr15 99505021 99505182 -3989792 - MIR SINE MIR -57 151 4 1 1344 315 0 0 0 chr15 99505596 99505631 -3989343 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1344 326 23 23 0 chr15 99505631 99505673 -3989301 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 1344 591 296 25 19 chr15 99505856 99506018 -3988956 + RSINE1 SINE B4 2 164 -1 1 1344 477 50 0 0 chr15 99506027 99506087 -3988887 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 1344 774 202 106 30 chr15 99506198 99506397 -3988577 - B3 SINE B2 -2 214 1 1 1344 378 61 0 0 chr15 99506904 99506953 -3988021 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 1 1344 262 194 115 77 chr15 99506963 99507041 -3987933 - B1_Mm SINE Alu -51 96 16 2 1344 1471 73 21 0 chr15 99508340 99508531 -3986443 + B2_Mm2 SINE B2 1 195 0 2 1344 960 134 42 12 chr15 99508641 99508807 -3986167 - B2_Mm2 SINE B2 -24 171 1 2 1344 423 56 0 0 chr15 99508848 99508902 -3986072 + (GA)n Simple_repeat Simple_repeat 1 54 0 2 1344 339 177 0 0 chr15 99509885 99509981 -3984993 + (CAGGG)n Simple_repeat Simple_repeat 4 99 0 2 1344 245 65 0 61 chr15 99510205 99510254 -3984720 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 2 1344 3170 52 34 0 chr15 99510266 99510652 -3984322 - MTB LTR MaLR 0 400 2 2 1344 785 158 31 0 chr15 99510652 99510779 -3984195 - B1_Mus2 SINE Alu -15 132 2 2 1344 207 104 41 20 chr15 99510907 99510956 -3984018 + GA-rich Low_complexity Low_complexity 1 50 0 2 1344 875 36 0 0 chr15 99510956 99511066 -3983908 - B2_Mm2 SINE B2 -85 110 1 2 1344 704 195 23 8 chr15 99511873 99512002 -3982972 - B1_Mur3 SINE Alu -17 132 2 3 1344 1175 43 0 0 chr15 99512034 99512172 -3982802 - B1_Mus1 SINE Alu -10 138 1 3 1344 312 87 0 0 chr15 99512326 99512372 -3982602 - BC1_Mm scRNA scRNA -57 95 50 3 1344 1242 87 5 120 chr15 99512386 99512595 -3982379 - B2_Mm2 SINE B2 -8 187 3 3 1344 195 346 98 6 chr15 99512612 99512775 -3982199 + L2b LINE L2 1321 1498 -1921 3 1344 394 269 18 18 chr15 99512977 99513087 -3981887 + PB1 SINE Alu 1 110 -17 3 1344 905 47 143 38 chr15 99513287 99513420 -3981554 - B1_Mm SINE Alu 0 147 1 3 1344 1109 142 56 51 chr15 99513422 99513637 -3981337 - B3 SINE B2 0 216 1 3 1344 386 313 0 9 chr15 99513836 99513952 -3981022 + PB1D10 SINE Alu 1 115 -2 3 1344 1136 66 167 6 chr15 99513957 99514125 -3980849 + B2_Mm2 SINE B2 1 195 0 3 1344 1726 167 70 20 chr15 99514145 99514359 -3980615 + ORR1D1 LTR MaLR 15 231 -143 4 1344 195 42 0 0 chr15 99514359 99514383 -3980591 + (CCTG)n Simple_repeat Simple_repeat 4 27 0 4 1344 1726 167 70 20 chr15 99514383 99514511 -3980463 + ORR1D1 LTR MaLR 232 373 -1 4 1344 2930 140 2 12 chr15 99514532 99515023 -3979951 - MERVL_2A-int LTR ERVL -2422 3339 2854 4 1344 1680 168 79 101 chr15 99515024 99515402 -3979572 - ORR1D1 LTR MaLR -4 370 1 4 1344 538 301 22 28 chr15 99515419 99515600 -3979374 + ID_B1 SINE B4 36 215 -9 4 1344 430 296 0 167 chr15 99515612 99515786 -3979188 + ID_B1 SINE B4 80 224 0 4 1344 253 300 25 0 chr15 99515826 99515906 -3979068 + ID4 SINE ID 1 82 -1 4 1344 770 279 47 7 chr15 99516361 99516635 -3978339 - L1ME3 LINE L1 -299 5863 5579 4 1344 272 388 70 13 chr15 99516636 99516934 -3978040 + L2b LINE L2 2235 2549 -870 3 1344 707 185 82 0 chr15 99517049 99517184 -3977790 - B1F SINE Alu -2 147 2 4 1344 189 0 0 0 chr15 99517362 99517383 -3977591 + (CAGA)n Simple_repeat Simple_repeat 3 23 0 4 1344 251 349 84 22 chr15 99517437 99517616 -3977358 + L2b LINE L2 3119 3308 -67 3 1344 565 136 56 37 chr15 99517704 99517831 -3977143 - B1_Mur4 SINE Alu -8 142 1 5 1344 189 0 0 0 chr15 99517886 99517907 -3977067 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 1344 413 319 100 0 chr15 99518077 99518237 -3976737 - B2_Mm2 SINE B2 -14 181 6 5 1344 788 216 117 22 chr15 99518220 99518443 -3976531 - B4A SINE B4 -47 245 2 5 1344 430 211 8 119 chr15 99518777 99518895 -3976079 - B1_Mur1 SINE Alu -25 124 20 5 1344 312 27 0 0 chr15 99519050 99519087 -3975887 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 1344 562 250 8 8 chr15 99519680 99519809 -3975165 - RSINE1 SINE B4 -29 136 8 5 1344 539 213 74 0 chr15 99520022 99520130 -3974844 + PB1 SINE Alu 1 116 -11 5 1344 849 219 26 71 chr15 99520150 99520376 -3974598 + B3 SINE B2 1 216 0 5 1344 1228 54 0 0 chr15 99520382 99520529 -3974445 - B1_Mus1 SINE Alu 0 148 2 5 1344 604 259 43 0 chr15 99520560 99520699 -3974275 + B1_Mur1 SINE Alu 3 147 -2 6 1344 288 343 20 113 chr15 99520736 99520887 -3974087 + RSINE1 SINE B4 3 139 -26 6 1344 237 139 0 0 chr15 99521418 99521461 -3973513 + (TCCC)n Simple_repeat Simple_repeat 1 43 0 6 1344 240 100 0 0 chr15 99521773 99521813 -3973161 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1344 315 49 0 0 chr15 99524005 99524046 -3970928 + (TC)n Simple_repeat Simple_repeat 1 41 0 6 1344 372 22 0 0 chr15 99524049 99524094 -3970880 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1344 439 264 83 0 chr15 99524809 99524930 -3970044 - LTR33 LTR ERVL -52 463 333 6 1344 883 227 99 67 chr15 99526075 99526358 -3968616 + B4A SINE B4 1 292 0 6 1344 543 140 0 89 chr15 99526360 99526784 -3968190 + (CA)n Simple_repeat Simple_repeat 1 386 0 6 1344 395 294 150 17 chr15 99528278 99528451 -3966523 - MIRc SINE MIR -29 239 44 6 1344 369 0 0 0 chr15 99529775 99529816 -3965158 + (GA)n Simple_repeat Simple_repeat 2 42 0 7 1344 796 90 44 22 chr15 99531588 99531725 -3963249 - B1_Mur3 SINE Alu 0 149 10 7 1344 334 276 200 0 chr15 99531828 99531933 -3963041 + ID_B1 SINE B4 82 207 -17 7 1344 293 200 62 62 chr15 99532107 99532203 -3962771 - RLTR25B LTR ERVK -492 536 441 7 1344 986 16 0 0 chr15 99532117 99532242 -3962732 - B1_Mus1 SINE Alu -22 126 2 7 1344 466 239 41 82 chr15 99532242 99532268 -3962706 - MT2B LTR ERVL -443 158 139 7 1344 21 0 0 0 chr15 99532640 99532661 -3962313 + GC_rich Low_complexity Low_complexity 1 21 0 7 1344 25 0 0 0 chr15 99532679 99532704 -3962270 + GC_rich Low_complexity Low_complexity 1 25 0 7 1344 27 0 0 0 chr15 99532947 99532974 -3962000 + GC_rich Low_complexity Low_complexity 1 27 0 7 1344 1429 54 27 5 chr15 99535749 99535775 -3959199 - B2_Mm1a SINE B2 -1 192 162 7 1344 279 0 0 0 chr15 99535775 99535806 -3959168 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 8 1344 1429 54 27 5 chr15 99535806 99535966 -3959008 - B2_Mm1a SINE B2 -32 161 3 7 1344 312 27 0 0 chr15 99536897 99536934 -3958040 + (T)n Simple_repeat Simple_repeat 1 37 0 8 1344 1166 68 0 0 chr15 99537368 99537515 -3957459 - B1_Mus1 SINE Alu 0 148 2 8 1344 1124 35 0 0 chr15 99539076 99539219 -3955755 - B1_Mus1 SINE Alu 0 148 6 8 1344 442 248 108 14 chr15 99539302 99539441 -3955533 + RSINE1 SINE B4 6 157 -8 8 1344 1117 63 42 0 chr15 99540043 99540185 -3954789 - B1_Mus1 SINE Alu 0 148 1 8 1344 224 250 13 77 chr15 99540194 99540272 -3954702 - PB1D7 SINE Alu 0 120 48 8 1344 603 126 16 8 chr15 99540582 99540710 -3954264 + (GA)n Simple_repeat Simple_repeat 1 129 0 8 1344 441 259 9 0 chr15 99540749 99540857 -3954117 + B1F2 SINE Alu 1 109 -40 8 1344 1004 285 45 58 chr15 99542122 99542498 -3952476 - MLT1B LTR MaLR 0 390 20 8 1344 234 0 0 0 chr15 99544321 99544347 -3950627 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 9 1344 334 241 22 44 chr15 99545092 99545183 -3949791 - ID_B1 SINE B4 -53 171 83 9 1344 1287 34 0 0 chr15 99545206 99545353 -3949621 - B1_Mus2 SINE Alu 0 147 1 9 1344 305 265 0 105 chr15 99545568 99545682 -3949292 + MT2B LTR ERVL 146 247 -354 9 1344 466 206 62 0 chr15 99545602 99545699 -3949275 + PB1D9 SINE Alu 13 115 -5 9 1344 826 207 0 52 chr15 99547109 99547262 -3947712 - B1_Mur3 SINE Alu 0 149 5 9 1344 497 227 0 0 chr15 99547532 99547629 -3947345 - B1_Mur3 SINE Alu -51 98 2 9 1344 317 321 8 97 chr15 99547629 99547667 -3947307 - B4 SINE B4 -206 86 60 9 1344 1203 62 0 0 chr15 99549867 99550013 -3944961 + B1_Mus2 SINE Alu 2 147 0 9 1344 297 0 0 0 chr15 99550046 99550079 -3944895 + (CAAG)n Simple_repeat Simple_repeat 2 34 0 9 1344 433 197 14 0 chr15 99550082 99550153 -3944821 + ID4_ SINE ID 1 72 -11 1 1344 188 214 0 18 chr15 99550166 99550223 -3944751 + GA-rich Low_complexity Low_complexity 2 57 0 1 1344 228 67 0 0 chr15 99550755 99550785 -3944189 + (GGGGA)n Simple_repeat Simple_repeat 4 33 0 1 1344 276 275 89 25 chr15 99550847 99550968 -3944006 + PB1D10 SINE Alu 12 137 -12 1 1344 230 313 0 67 chr15 99551404 99551493 -3943481 + B4A SINE B4 87 169 -123 1 1344 543 165 0 44 chr15 99551414 99551528 -3943446 + PB1D9 SINE Alu 10 118 -2 1 1344 334 272 19 28 chr15 99551581 99551598 -3943376 + B4 SINE B4 70 85 -207 1 1344 457 198 11 21 chr15 99551598 99551681 -3943293 + B1_Mus1 SINE Alu 2 83 -65 1 1344 734 251 85 19 chr15 99551681 99551892 -3943082 + B4A SINE B4 3 227 -65 1 1344 786 184 14 14 chr15 99551895 99552033 -3942941 + B1_Mur1 SINE Alu 3 140 -9 1 1344 555 43 0 0 chr15 99552110 99552180 -3942794 + (CA)n Simple_repeat Simple_repeat 2 71 0 1 1344 292 176 2 90 chr15 99552691 99552770 -3942204 + ID4 SINE ID 8 81 -71 1 1344 210 299 60 0 chr15 99553298 99553365 -3941609 - MIRm SINE MIR -125 151 81 1 1344 211 114 0 28 chr15 99555597 99555633 -3939341 + (CCCCCA)n Simple_repeat Simple_repeat 2 36 0 1 1344 418 254 22 2 chr15 99556999 99557102 -3937872 - ID_B1 SINE B4 -142 150 39 1 1344 228 196 250 0 chr15 99557062 99557118 -3937856 - ID4_ SINE ID -6 77 8 1 1344 511 111 14 0 chr15 99557305 99557377 -3937597 + B3 SINE B2 1 73 -143 1 1344 1540 57 0 15 chr15 99557398 99557593 -3937381 - B2_Mm2 SINE B2 -3 192 1 1 1344 1719 26 0 0 chr15 99557747 99557940 -3937034 - B2_Mm1a SINE B2 0 193 1 1 1344 751 149 48 41 chr15 99558574 99558721 -3936253 - B1_Mur2 SINE Alu 0 149 2 1 1344 1499 186 66 71 chr15 99558726 99559055 -3935919 - ORR1D1 LTR MaLR -11 363 34 1 1344 1312 90 16 16 chr15 99559055 99559246 -3935728 - B2_Mm2 SINE B2 0 195 5 1 1344 1499 186 66 71 chr15 99559246 99559281 -3935693 - ORR1D1 LTR MaLR -341 33 1 1 1344 790 200 43 26 chr15 99559591 99559775 -3935199 + B3 SINE B2 27 205 -11 1 1344 977 125 21 0 chr15 99559783 99559927 -3935047 + B1_Mus1 SINE Alu 1 147 -1 1 1344 1076 96 44 22 chr15 99559949 99560130 -3934844 - B2_Mm2 SINE B2 -9 186 2 1 1344 231 114 0 0 chr15 99560133 99560168 -3934806 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1344 961 17 0 0 chr15 99560173 99560289 -3934685 - B1_Mm SINE Alu 0 147 32 1 1344 322 163 65 140 chr15 99560216 99560323 -3934651 - RLTR25B LTR ERVK -519 509 411 1 1344 493 237 8 33 chr15 99560437 99560559 -3934415 + PB1D9 SINE Alu 2 120 0 1 1344 631 252 35 21 chr15 99560777 99560919 -3934055 + RSINE1 SINE B4 5 148 -17 1 1344 411 202 78 39 chr15 99560904 99561007 -3933967 + PB1D9 SINE Alu 8 114 -6 1 1344 21 0 0 0 chr15 99561045 99561066 -3933908 + AT_rich Low_complexity Low_complexity 1 21 0 1 1344 1173 82 0 144 chr15 99561132 99561171 -3933803 + B2_Mm2 SINE B2 1 39 -156 1 1344 1189 48 21 0 chr15 99561171 99561316 -3933658 + B1_Mus1 SINE Alu 1 148 0 1 1344 1173 82 0 144 chr15 99561316 99561477 -3933497 + B2_Mm2 SINE B2 40 172 -23 1 1344 714 206 23 0 chr15 99561485 99561616 -3933358 + B1_Mus1 SINE Alu 6 139 -9 1 1344 306 243 26 88 chr15 99561520 99561633 -3933341 + RLTR25B LTR ERVK 444 549 -479 1 1344 428 306 27 34 chr15 99561649 99561661 -3933313 + ID_B1 SINE B4 77 158 -66 1 1344 617 215 54 0 chr15 99561661 99561791 -3933183 + B1F2 SINE Alu 6 142 -7 1 1344 521 169 31 10 chr15 99561794 99561890 -3933084 + B3 SINE B2 1 98 -118 1 1344 1648 37 0 0 chr15 99561927 99562115 -3932859 + B2_Mm1a SINE B2 2 189 -4 1 1344 778 174 23 8 chr15 99562348 99562481 -3932493 + B3 SINE B2 1 135 -81 1 1344 315 0 0 0 chr15 99562496 99562531 -3932443 + (CATA)n Simple_repeat Simple_repeat 4 38 0 1 1344 661 250 26 26 chr15 99562580 99562732 -3932242 + RSINE1 SINE B4 14 165 0 1 1344 254 323 41 65 chr15 99562732 99562749 -3932225 + B2_Mm2 SINE B2 13 177 -18 1 1344 300 253 80 0 chr15 99562866 99562941 -3932033 + RSINE1 SINE B4 79 159 -6 1 1344 1216 116 22 0 chr15 99563256 99563437 -3931537 - B2_Mm2 SINE B2 -10 185 1 1 1344 419 237 29 58 chr15 99563444 99563547 -3931427 - PB1D9 SINE Alu -20 100 1 1 1344 461 290 63 16 chr15 99564012 99564138 -3930836 - RSINE1 SINE B4 -31 134 3 1 1344 1191 75 103 0 chr15 99564148 99564322 -3930652 - B2_Mm1a SINE B2 -1 192 1 1 1344 1207 41 7 0 chr15 99564337 99564483 -3930491 - B1_Mus1 SINE Alu 0 148 2 1 1344 25 31 0 0 chr15 99564503 99564535 -3930439 + AT_rich Low_complexity Low_complexity 1 32 0 1 1344 333 0 0 0 chr15 99564663 99564700 -3930274 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1344 448 176 167 53 chr15 99564708 99564822 -3930152 - B3 SINE B2 -88 128 2 1 1344 336 279 87 119 chr15 99564822 99564937 -3930037 - PB1D7 SINE Alu -37 111 1 1 1344 1811 175 166 3 chr15 99565266 99565621 -3929353 - MTC LTR MaLR -8 413 1 1 1344 544 261 77 42 chr15 99565761 99565929 -3929045 - B3 SINE B2 -5 211 38 1 1344 1260 41 0 0 chr15 99568574 99568721 -3926253 + B1_Mus2 SINE Alu 1 147 0 1 1344 588 246 144 33 chr15 99568819 99569000 -3925974 - ID_B1 SINE B4 -23 201 1 1 1344 395 216 90 11 chr15 99570265 99570354 -3924620 + B3A SINE B2 70 165 -33 1 1344 231 125 0 0 chr15 99570357 99570397 -3924577 + (CAGA)n Simple_repeat Simple_repeat 3 42 0 1 1344 680 138 134 31 chr15 99570472 99570599 -3924375 - B1_Mus2 SINE Alu -6 141 2 1 1344 601 297 63 75 chr15 99570708 99571043 -3923931 + ORR1E LTR MaLR 1 331 -28 1 1344 366 317 48 27 chr15 99572194 99572340 -3922634 + B1F2 SINE Alu 1 149 0 1 1344 367 177 0 0 chr15 99572388 99572450 -3922524 - B1F SINE Alu -61 88 27 1 1344 411 256 0 0 chr15 99572450 99572532 -3922442 + B1F SINE Alu 66 147 -2 1 1344 336 309 0 0 chr15 99572608 99572689 -3922285 - B4A SINE B4 -211 81 1 1 1344 25 0 0 0 chr15 99572689 99572714 -3922260 + AT_rich Low_complexity Low_complexity 1 25 0 1 1344 342 264 93 9 chr15 99572885 99572992 -3921982 - B3A SINE B2 -2 196 81 1 1344 714 224 141 7 chr15 99573029 99573209 -3921765 - B3 SINE B2 -11 205 4 1 1344 207 0 0 0 chr15 99573272 99573295 -3921679 + (TC)n Simple_repeat Simple_repeat 1 23 0 1 1344 397 239 17 68 chr15 99573297 99573414 -3921560 - PB1D9 SINE Alu -8 112 2 1 1344 692 132 19 0 chr15 99573477 99573583 -3921391 - PB1D9 SINE Alu -11 109 2 1 1344 285 177 60 23 chr15 99573730 99573812 -3921162 - PB1 SINE Alu 0 150 59 1 1344 729 279 26 17 chr15 99574017 99574213 -3920761 - B3A SINE B2 0 216 23 1 1344 669 134 27 136 chr15 99574194 99574341 -3920633 + B1_Mur4 SINE Alu 13 143 -7 1 1344 342 0 0 0 chr15 99574342 99574380 -3920594 + (CAAT)n Simple_repeat Simple_repeat 3 40 0 1 1344 265 239 11 32 chr15 99574392 99574487 -3920487 - Lx9 LINE L1 -49 7595 7503 1 1344 385 268 28 128 chr15 99574573 99574714 -3920260 + B3A SINE B2 65 191 -7 1 1344 631 190 267 19 chr15 99574737 99574898 -3920076 + B3 SINE B2 1 201 -15 1 1344 921 158 14 0 chr15 99574898 99575044 -3919930 + B1_Mur4 SINE Alu 3 150 0 1 1344 1244 40 0 0 chr15 99575147 99575295 -3919679 - B1_Mus1 SINE Alu 0 148 1 1 1344 1536 61 0 0 chr15 99575302 99575499 -3919475 - L1_Mus2 LINE L1 0 6566 6370 1 1344 221 258 58 43 chr15 99575590 99575659 -3919315 + PB1D10 SINE Alu 1 70 -47 1 1344 323 329 66 9 chr15 99575677 99575816 -3919158 + B4A SINE B4 1 151 -73 1 1344 304 253 54 11 chr15 99575838 99575930 -3919044 + PB1D9 SINE Alu 25 120 0 1 1344 232 196 16 111 chr15 99576131 99576194 -3918780 + B1F1 SINE Alu 2 58 -91 1 1344 1542 27 32 5 chr15 99576752 99576938 -3918036 - B2_Mm1a SINE B2 -1 192 2 1 1344 418 36 0 35 chr15 99576956 99577013 -3917961 - B1_Mus2 SINE Alu 0 147 93 1 1344 225 0 0 0 chr15 99577013 99577038 -3917936 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1344 528 191 76 38 chr15 99577045 99577176 -3917798 - B1_Mur1 SINE Alu -13 136 1 1 1344 531 0 0 0 chr15 99577867 99577926 -3917048 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 1344 750 254 9 24 chr15 99577941 99578126 -3916848 + B3 SINE B2 3 185 -31 1 1344 207 0 0 0 chr15 99578126 99578149 -3916825 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 1344 750 254 9 24 chr15 99578149 99578173 -3916801 + B3 SINE B2 186 209 -7 1 1344 7831 144 29 156 chr15 99578424 99579775 -3915199 - ORR1B1-int LTR MaLR -14 1949 1 1 1344 297 51 0 0 chr15 99579775 99579814 -3915160 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1344 7831 145 39 190 chr15 99579814 99581120 -3913854 - ORR1B1-int LTR MaLR -920 1043 1 1 1344 1086 99 86 0 chr15 99581124 99581338 -3913636 - ORR1B1 LTR MaLR -8 386 51 1 1344 578 58 195 0 chr15 99581346 99581433 -3913541 + B1_Mus2 SINE Alu 1 104 -43 1 1344 287 25 0 24 chr15 99581436 99581477 -3913497 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 1 1344 492 157 0 105 chr15 99581480 99581594 -3913380 - ORR1B1 LTR MaLR -292 102 1 1 1344 461 163 130 0 chr15 99581972 99582064 -3912910 + B1_Mus1 SINE Alu 35 138 -10 1 1344 294 0 21 42 chr15 99582064 99582112 -3912862 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 1 1344 513 204 44 9 chr15 99582123 99582237 -3912737 + PB1D9 SINE Alu 2 119 -1 1 1344 220 317 28 46 chr15 99582322 99582431 -3912543 + PB1D10 SINE Alu 1 107 -10 2 1344 42 36 0 0 chr15 99582455 99582511 -3912463 + AT_rich Low_complexity Low_complexity 1 56 0 2 1344 732 252 45 10 chr15 99582512 99582712 -3912262 - B3 SINE B2 -9 207 1 2 1344 301 140 0 0 chr15 99582814 99582864 -3912110 - B3 SINE B2 -9 207 158 2 1344 1037 165 33 0 chr15 99583436 99583618 -3911356 + MTD LTR MaLR 225 412 -7 2 1344 273 135 68 119 chr15 99584042 99584101 -3910873 - B3 SINE B2 -67 149 94 2 1344 431 223 64 55 chr15 99584185 99584294 -3910680 - B1_Mur2 SINE Alu -7 142 33 2 1344 410 353 45 0 chr15 99584392 99584525 -3910449 - RSINE1 SINE B4 -21 144 6 2 1344 266 291 314 13 chr15 99584613 99584766 -3910208 + ID_B1 SINE B4 10 208 -16 2 1344 393 208 0 14 chr15 99585025 99585098 -3909876 + B1_Mur1 SINE Alu 73 144 -5 2 1344 841 267 28 32 chr15 99585137 99585354 -3909620 + B4 SINE B4 3 218 -74 2 1344 620 260 19 32 chr15 99585356 99585511 -3909463 + B3A SINE B2 27 179 -19 2 1344 966 129 7 7 chr15 99585521 99585669 -3909305 - B1_Mur4 SINE Alu 0 150 3 2 1344 466 220 11 42 chr15 99585718 99585813 -3909161 - RSINE1 SINE B4 -67 98 7 2 1344 640 274 184 11 chr15 99585827 99586196 -3908778 + Charlie1b DNA MER1_type 47 479 -44 2 1344 279 0 0 0 chr15 99586222 99586253 -3908721 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1344 479 327 67 29 chr15 99586389 99586597 -3908377 - B4A SINE B4 -74 218 3 2 1344 401 247 20 30 chr15 99586641 99586741 -3908233 - PB1D7 SINE Alu -10 110 12 2 1344 263 212 109 100 chr15 99587162 99587272 -3907702 + RMER20B LTR ERVK 479 589 -38 2 1344 601 194 108 8 chr15 99587864 99587994 -3906980 + B1_Mur1 SINE Alu 5 147 -2 2 1344 275 321 36 0 chr15 99588006 99588090 -3906884 + Lx8 LINE L1 7184 7270 -203 2 1344 393 182 0 0 chr15 99588320 99588386 -3906588 - B1_Mur4 SINE Alu -83 67 2 2 1344 343 261 33 0 chr15 99588649 99588741 -3906233 - ID_B1 SINE B4 -31 193 99 2 1344 191 36 36 0 chr15 99588815 99588843 -3906131 + (TGG)n Simple_repeat Simple_repeat 3 31 0 2 1344 392 329 7 47 chr15 99589000 99589041 -3905933 + B1F SINE Alu 6 46 -103 2 1344 1755 160 107 18 chr15 99589041 99589378 -3905596 - ORR1B2 LTR MaLR 0 367 1 2 1344 392 329 7 47 chr15 99589378 99589486 -3905488 + B1F SINE Alu 47 148 -1 2 1344 779 127 17 0 chr15 99589505 99589623 -3905351 + PB1D9 SINE Alu 1 120 0 2 1344 264 293 0 24 chr15 99589645 99589729 -3905245 + ID4_ SINE ID 1 82 -1 2 1344 333 317 0 24 chr15 99589733 99589844 -3905130 + B1F SINE Alu 1 138 -11 2 1344 428 222 229 23 chr15 99590005 99590180 -3904794 - B3 SINE B2 -5 211 1 2 1344 222 235 172 23 chr15 99590369 99590456 -3904518 - PB1D10 SINE Alu -43 104 5 2 1344 426 215 213 9 chr15 99590448 99590556 -3904418 - B1_Mm SINE Alu -15 132 3 2 1344 233 313 36 12 chr15 99590571 99590619 -3904355 + B3A SINE B2 21 70 -128 2 1344 410 196 79 29 chr15 99590619 99590724 -3904250 + PB1D9 SINE Alu 3 119 -1 2 1344 1120 98 98 0 chr15 99590727 99590901 -3904073 + B2_Mm1t SINE B2 2 192 -1 2 1344 198 71 0 0 chr15 99590904 99590932 -3904042 + (CAAAC)n Simple_repeat Simple_repeat 1 28 0 2 1344 390 273 45 0 chr15 99590947 99591035 -3903939 + B1_Mur3 SINE Alu 1 92 -57 2 1344 1087 112 12 6 chr15 99591039 99591200 -3903774 + B2_Mm1t SINE B2 15 176 -17 2 1344 234 0 0 0 chr15 99591202 99591228 -3903746 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 1344 547 257 59 18 chr15 99591435 99591592 -3903382 - B3A SINE B2 -46 170 9 2 1344 1048 73 66 0 chr15 99591607 99591744 -3903230 - B1_Mus1 SINE Alu 0 148 3 2 1344 488 156 220 0 chr15 99591963 99592072 -3902902 - B1_Mus1 SINE Alu -15 133 1 2 1344 324 243 37 136 chr15 99592095 99592257 -3902717 - YREP_Mm Unknown Unknown -1485 327 182 2 1344 584 286 11 48 chr15 99592104 99592290 -3902684 + ID_B1 SINE B4 81 257 -35 2 1344 1035 39 8 0 chr15 99592298 99592427 -3902547 + B1_Mus1 SINE Alu 10 139 -9 2 1344 230 158 0 0 chr15 99592572 99592610 -3902364 + ID_B1 SINE B4 177 214 -10 2 1344 1494 47 10 10 chr15 99592707 99592900 -3902074 + B2_Mm1a SINE B2 1 193 0 2 1344 1678 120 129 14 chr15 99593469 99593764 -3901210 + ORR1A4 LTR MaLR 1 329 0 2 1344 8746 155 67 86 chr15 99593764 99595620 -3899354 + ORR1A4-int LTR MaLR 1 1814 -149 2 1344 1392 78 0 6 chr15 99595620 99595801 -3899173 - B2_Mm2 SINE B2 -14 181 2 2 1344 8746 155 67 86 chr15 99595801 99595945 -3899029 + ORR1A4-int LTR MaLR 1815 1963 0 2 1344 1442 131 60 15 chr15 99595945 99596220 -3898754 + ORR1A4 LTR MaLR 1 321 -8 2 1344 335 235 99 50 chr15 99596826 99596843 -3898131 + MT2B LTR ERVL 152 174 -427 2 1344 617 131 168 0 chr15 99596843 99596950 -3898024 + B1_Mur3 SINE Alu 1 125 -24 2 1344 712 169 72 8 chr15 99597067 99597192 -3897782 + B1_Mur3 SINE Alu 1 133 -16 2 1344 318 214 11 67 chr15 99597216 99597306 -3897668 + MT2B2 LTR ERVL 155 239 -345 2 1344 598 221 52 37 chr15 99597237 99597373 -3897601 + B1_Mur1 SINE Alu 9 146 -3 2 1344 1183 68 0 0 chr15 99597700 99597847 -3897127 + B1_Mus1 SINE Alu 2 148 0 2 1344 240 196 71 0 chr15 99597871 99597927 -3897047 + B1F SINE Alu 10 69 -80 2 1344 381 330 9 0 chr15 99598448 99598560 -3896414 + B1F SINE Alu 5 117 -32 2 1344 420 273 0 0 chr15 99598738 99598826 -3896148 + PB1D10 SINE Alu 17 104 -13 2 1344 549 218 91 0 chr15 99598889 99598999 -3895975 + B1_Mur2 SINE Alu 21 140 -9 2 1344 227 240 27 0 chr15 99599161 99599236 -3895738 + (TA)n Simple_repeat Simple_repeat 1 77 0 2 1344 442 268 28 14 chr15 99599308 99599420 -3895554 - B1F1 SINE Alu -17 130 23 2 1344 1022 103 20 0 chr15 99599470 99599616 -3895358 + B1_Mur4 SINE Alu 2 150 0 2 1344 322 280 82 27 chr15 99599639 99599749 -3895225 + B1F1 SINE Alu 33 148 -1 2 1344 342 0 0 0 chr15 99600082 99600120 -3894854 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1344 1340 87 22 0 chr15 99600136 99600319 -3894655 - B2_Mm1t SINE B2 -5 188 2 2 1344 802 120 17 0 chr15 99600321 99600438 -3894536 - PB1D9 SINE Alu 0 120 2 2 1344 259 230 207 0 chr15 99600442 99600529 -3894445 - B1_Mus2 SINE Alu 0 149 45 2 1344 786 197 50 73 chr15 99600550 99600769 -3894205 - B3 SINE B2 -2 214 1 2 1344 213 39 0 0 chr15 99601129 99601155 -3893819 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1344 215 200 18 91 chr15 99602489 99602599 -3892375 + C-rich Low_complexity Low_complexity 6 107 0 2 1344 624 59 0 0 chr15 99603317 99603402 -3891572 + (TCC)n Simple_repeat Simple_repeat 3 87 0 2 1344 267 324 24 0 chr15 99603843 99603925 -3891049 - MIR SINE MIR -127 149 60 2 1344 1605 52 0 0 chr15 99603935 99604127 -3890847 + B2_Mm1a SINE B2 1 192 -1 2 1344 22 0 0 0 chr15 99604181 99604203 -3890771 + AT_rich Low_complexity Low_complexity 1 22 0 2 1344 1253 82 0 12 chr15 99604238 99604410 -3890564 - B2_Mm2 SINE B2 -25 170 1 2 1344 280 243 40 0 chr15 99604852 99604926 -3890048 - ID4_ SINE ID -3 80 4 2 1344 198 0 0 0 chr15 99604927 99604949 -3890025 + (CTTG)n Simple_repeat Simple_repeat 2 23 0 2 1344 1001 78 122 13 chr15 99604953 99605109 -3889865 - B2_Mm2 SINE B2 -22 173 1 2 1344 882 245 25 5 chr15 99605247 99605448 -3889526 - B3 SINE B2 -11 205 1 2 1344 572 199 45 15 chr15 99605574 99605707 -3889267 - B1_Mus2 SINE Alu 0 147 11 2 1344 337 246 73 80 chr15 99605707 99605724 -3889250 - ID_B1 SINE B4 0 224 76 2 1344 857 98 15 29 chr15 99605936 99606073 -3888901 + B1_Mur3 SINE Alu 2 136 -13 2 1344 216 0 0 0 chr15 99606077 99606101 -3888873 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 1344 573 244 57 36 chr15 99606511 99606651 -3888323 + B1_Mur1 SINE Alu 1 143 -6 2 1344 982 238 24 24 chr15 99606718 99606929 -3888045 + B3 SINE B2 6 216 0 2 1344 667 298 65 8 chr15 99606944 99607042 -3887932 + RCHARR1 DNA MER1_type 714 822 -152 2 1344 883 209 45 15 chr15 99607042 99607241 -3887733 + B3 SINE B2 2 206 -10 2 1344 667 298 65 8 chr15 99607241 99607389 -3887585 + RCHARR1 DNA MER1_type 823 974 0 2 1344 975 116 0 21 chr15 99607535 99607676 -3887298 + B1_Mur3 SINE Alu 1 138 -11 2 1344 361 248 28 0 chr15 99607796 99607905 -3887069 - PB1D7 SINE Alu -3 117 6 2 1344 388 293 71 86 chr15 99607946 99607963 -3887011 - B2_Mm2 SINE B2 0 195 181 2 1344 1263 20 7 0 chr15 99607963 99608109 -3886865 - B1_Mus2 SINE Alu 0 147 1 2 1344 618 293 19 16 chr15 99608109 99608289 -3886685 - B3 SINE B2 -15 180 1 2 1344 491 229 18 44 chr15 99608289 99608403 -3886571 - PB1D7 SINE Alu -1 119 9 2 1344 303 266 51 68 chr15 99608299 99608416 -3886558 - B4A SINE B4 -94 198 84 2 1344 929 252 45 38 chr15 99609226 99609490 -3885484 + MTD LTR MaLR 154 419 0 2 1344 226 274 71 31 chr15 99609885 99609983 -3884991 - RSINE1 SINE B4 -49 116 15 2 1344 630 143 0 92 chr15 99610369 99610500 -3884474 - PB1D9 SINE Alu -1 119 1 2 1344 1527 33 27 16 chr15 99611944 99612130 -3882844 - B2_Mm1t SINE B2 -4 189 2 2 1344 1101 68 7 20 chr15 99612134 99612283 -3882691 - B1_Mus1 SINE Alu 0 148 2 2 1344 522 193 79 122 chr15 99612283 99612325 -3882649 - B4A SINE B4 -215 77 44 2 1344 404 258 85 47 chr15 99612344 99612450 -3882524 - PB1D10 SINE Alu 0 117 8 2 1344 1207 88 19 0 chr15 99612850 99613010 -3881964 - B2_Mm2 SINE B2 -31 164 2 2 1344 1215 49 0 0 chr15 99613031 99613175 -3881799 - B1_Mm SINE Alu 0 147 4 3 1344 587 224 103 15 chr15 99613188 99613324 -3881650 - B1_Mur1 SINE Alu 0 149 2 3 1344 758 193 222 6 chr15 99613359 99613526 -3881448 + B3 SINE B2 1 203 -13 3 1344 587 62 0 24 chr15 99613552 99613635 -3881339 + B2_Mm1t SINE B2 105 185 -8 3 1344 240 229 16 0 chr15 99614339 99614400 -3880574 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 20 451 348 58 0 chr15 99614688 99614826 -3880148 - ID_B1 SINE B4 -5 219 74 3 1345 25 65 0 0 chr15 99614827 99614873 -3880101 + AT_rich Low_complexity Low_complexity 1 46 0 3 1345 699 267 0 0 chr15 99614884 99615034 -3879940 - RSINE1 SINE B4 -14 151 2 3 1345 978 85 0 0 chr15 99615064 99615193 -3879781 - B1_Mm SINE Alu -18 129 1 3 1345 1087 98 102 17 chr15 99615398 99615574 -3879400 + B2_Mm2 SINE B2 3 193 -2 3 1345 621 280 71 20 chr15 99615643 99615840 -3879134 + ID_B1 SINE B4 1 207 -17 3 1345 255 31 0 0 chr15 99616208 99616240 -3878734 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 1345 447 289 20 27 chr15 99616243 99616389 -3878585 + B1F2 SINE Alu 1 145 -4 3 1345 1524 58 16 0 chr15 99616999 99617187 -3877787 + B2_Mm2 SINE B2 2 192 -3 3 1345 1159 48 0 14 chr15 99617358 99617505 -3877469 + B1_Mus2 SINE Alu 1 145 -2 3 1345 209 270 10 0 chr15 99617576 99617676 -3877298 + (CA)n Simple_repeat Simple_repeat 2 102 0 3 1345 201 39 0 0 chr15 99618630 99618656 -3876318 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 3 1345 231 365 28 9 chr15 99618684 99618792 -3876182 - MIR SINE MIR -62 146 37 3 1345 180 97 0 0 chr15 99619304 99619335 -3875639 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1345 429 20 0 0 chr15 99619750 99619800 -3875174 + (TTCC)n Simple_repeat Simple_repeat 4 53 0 3 1345 204 40 0 0 chr15 99619801 99619826 -3875148 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 3 1345 1010 168 26 16 chr15 99619837 99620030 -3874944 - B2_Mm2 SINE B2 0 195 1 3 1345 1422 79 11 0 chr15 99620350 99620540 -3874434 + B2_Mm1t SINE B2 1 192 -1 3 1345 1012 196 43 0 chr15 99620560 99620744 -3874230 + B3 SINE B2 2 193 -23 3 1345 1048 155 103 5 chr15 99620787 99620982 -3873992 - B3 SINE B2 0 216 3 3 1345 211 243 13 67 chr15 99621755 99621830 -3873144 - PB1D10 SINE Alu -2 115 45 3 1345 2226 152 60 12 chr15 99622024 99622425 -3872549 + MTC LTR MaLR 2 421 0 3 1345 269 337 23 11 chr15 99622428 99622515 -3872459 - BC1_Mm scRNA scRNA -52 100 13 3 1345 538 224 117 12 chr15 99622601 99622764 -3872210 - B3A SINE B2 -16 182 3 3 1345 1154 104 46 11 chr15 99623401 99623576 -3871398 + B2_Mm2 SINE B2 15 195 0 3 1345 195 69 0 0 chr15 99623663 99623692 -3871282 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 3 1345 1244 53 0 0 chr15 99623693 99623845 -3871129 - B2_Mm2 SINE B2 -43 152 1 3 1345 943 229 152 16 chr15 99623970 99624227 -3870747 - B4A SINE B4 0 292 1 3 1345 954 219 4 65 chr15 99624251 99624481 -3870493 - B3 SINE B2 0 216 1 3 1345 1302 58 109 0 chr15 99624576 99624750 -3870224 + B2_Mm2 SINE B2 3 195 0 3 1345 205 111 0 53 chr15 99625312 99625369 -3869605 + T-rich Low_complexity Low_complexity 2 55 0 3 1345 1259 41 0 0 chr15 99625408 99625555 -3869419 - B1_Mus2 SINE Alu 0 147 1 3 1345 232 152 20 80 chr15 99625589 99625639 -3869335 - B1_Mur1 SINE Alu -6 143 97 3 1345 704 172 8 8 chr15 99625706 99625835 -3869139 + B1_Mus2 SINE Alu 2 130 -17 3 1345 1106 83 7 0 chr15 99625970 99626115 -3868859 + B1_Mus2 SINE Alu 2 147 0 3 1345 309 100 0 0 chr15 99626115 99626165 -3868809 + (A)n Simple_repeat Simple_repeat 1 50 0 3 1345 1191 114 11 32 chr15 99626199 99626389 -3868585 - B2_Mm2 SINE B2 -7 188 3 3 1345 409 237 424 0 chr15 99626638 99626786 -3868188 + B3 SINE B2 2 212 -4 3 1345 801 161 6 86 chr15 99626844 99627007 -3867967 - B1_Mur4 SINE Alu 0 150 1 3 1345 459 247 0 0 chr15 99627655 99627752 -3867222 + ID_B1 SINE B4 117 213 -11 3 1345 501 17 0 0 chr15 99627752 99627810 -3867164 + (GGGGA)n Simple_repeat Simple_repeat 4 61 0 3 1345 623 296 0 27 chr15 99627832 99627978 -3866996 + B3 SINE B2 40 181 -35 3 1345 270 81 0 0 chr15 99627988 99628025 -3866949 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1345 21 71 0 0 chr15 99628222 99628264 -3866710 + AT_rich Low_complexity Low_complexity 1 42 0 3 1345 292 338 0 0 chr15 99628412 99628486 -3866488 - MIRb SINE MIR -8 260 187 3 1345 448 231 118 47 chr15 99628543 99628670 -3866304 + ID_B1 SINE B4 87 222 -2 3 1345 515 252 0 40 chr15 99628913 99629037 -3865937 + B3 SINE B2 1 119 -97 3 1345 192 40 0 0 chr15 99629057 99629082 -3865892 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1345 23 0 0 0 chr15 99629520 99629543 -3865431 + AT_rich Low_complexity Low_complexity 1 23 0 3 1345 620 255 7 0 chr15 99629603 99629744 -3865230 + B1_Mur1 SINE Alu 1 142 -7 3 1345 1053 173 99 0 chr15 99629813 99630004 -3864970 - B3 SINE B2 -5 211 2 3 1345 211 360 77 26 chr15 99630275 99630392 -3864582 + L2c LINE L2 3029 3151 -236 3 1345 377 188 0 12 chr15 99630519 99630605 -3864369 + GA-rich Low_complexity Low_complexity 1 85 0 3 1345 1453 69 5 0 chr15 99630644 99630833 -3864141 - B2_Mm1t SINE B2 -3 190 1 3 1345 419 350 19 0 chr15 99630965 99631125 -3863849 - RSINE1 SINE B4 0 165 3 3 1345 368 262 15 5 chr15 99631203 99631298 -3863676 + ID4 SINE ID 5 99 -53 3 1345 964 146 60 22 chr15 99631308 99631490 -3863484 + B2_Mm2 SINE B2 2 190 -5 3 1345 387 269 74 22 chr15 99631504 99631626 -3863348 + PB1 SINE Alu 9 124 -3 3 1345 1215 80 29 105 chr15 99631629 99631838 -3863136 + B2_Mm2 SINE B2 3 195 0 3 1345 1093 49 26 53 chr15 99631881 99632032 -3862942 - B1_Mm SINE Alu 0 147 1 3 1345 362 208 403 0 chr15 99632083 99632232 -3862742 + B3 SINE B2 2 210 -6 3 1345 365 256 0 25 chr15 99633397 99633477 -3861497 - ID_B1 SINE B4 -2 222 145 3 1345 654 98 11 0 chr15 99633465 99633557 -3861417 - U6 snRNA snRNA -14 93 1 3 1345 225 337 108 43 chr15 99633603 99633696 -3861278 - ID_B1 SINE B4 -125 99 1 3 1345 273 57 0 0 chr15 99633863 99633898 -3861076 + (CCTG)n Simple_repeat Simple_repeat 1 35 0 3 1345 782 206 61 38 chr15 99634135 99634347 -3860627 + ID_B1 SINE B4 1 217 -7 3 1345 217 0 61 0 chr15 99634426 99634459 -3860515 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 3 1345 1117 121 0 0 chr15 99634989 99635146 -3859828 + B2_Mm2 SINE B2 1 157 -38 3 1345 252 0 0 0 chr15 99635147 99635175 -3859799 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 3 1345 948 118 35 0 chr15 99635184 99635328 -3859646 + B2_Mm2 SINE B2 46 194 -1 3 1345 262 282 0 112 chr15 99635383 99635463 -3859511 + PB1D7 SINE Alu 40 110 -10 3 1345 574 115 0 11 chr15 99635463 99635551 -3859423 + B1_Mus2 SINE Alu 22 108 -39 3 1345 260 296 0 0 chr15 99635791 99635862 -3859112 - ID4 SINE ID -11 72 2 3 1345 344 311 22 22 chr15 99635905 99636043 -3858931 + L1MB7 LINE L1 5988 6125 -59 3 1345 388 216 0 0 chr15 99636059 99636133 -3858841 - ID4 SINE ID -6 77 4 3 1345 221 304 36 0 chr15 99636271 99636327 -3858647 + ID SINE ID 2 59 -165 3 1345 1254 54 0 0 chr15 99636384 99636532 -3858442 + B1_Mus1 SINE Alu 1 148 0 3 1345 635 170 26 18 chr15 99637102 99637216 -3857758 + PB1D7 SINE Alu 6 120 0 3 1345 1113 111 23 28 chr15 99637266 99637284 -3857690 - B2_Mm2 SINE B2 -20 175 162 3 1345 189 0 0 0 chr15 99637284 99637305 -3857669 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 3 1345 1113 111 23 28 chr15 99637305 99637462 -3857512 - B2_Mm2 SINE B2 -34 161 1 3 1345 243 239 145 66 chr15 99637587 99637663 -3857311 - ID4 SINE ID 0 83 2 3 1345 463 216 138 39 chr15 99637793 99637923 -3857051 + ID_B1 SINE B4 82 224 0 3 1345 284 185 54 33 chr15 99639042 99639113 -3855861 - ID4 SINE ID -65 87 14 3 1345 262 158 118 151 chr15 99639225 99639344 -3855630 + PB1D10 SINE Alu 3 117 0 3 1345 1138 68 0 33 chr15 99639347 99639499 -3855475 + B1_Mus1 SINE Alu 2 148 0 3 1345 23 33 0 0 chr15 99639505 99639535 -3855439 + AT_rich Low_complexity Low_complexity 1 30 0 3 1345 504 86 0 0 chr15 99639812 99639882 -3855092 + (TTC)n Simple_repeat Simple_repeat 1 70 0 3 1345 343 245 50 75 chr15 99640226 99640385 -3854589 - RSINE1 SINE B4 -8 157 3 3 1345 584 215 7 84 chr15 99640492 99640634 -3854340 - B1_Mur1 SINE Alu -1 148 18 3 1345 972 160 37 16 chr15 99641041 99641231 -3853743 - B2_Mm2 SINE B2 -1 194 1 3 1345 390 79 1 19 chr15 99641262 99641319 -3853655 - B1_Mur4 SINE Alu -5 145 56 3 1345 1433 78 11 0 chr15 99641319 99641510 -3853464 - B2_Mm1t SINE B2 0 193 1 3 1345 356 138 0 0 chr15 99641808 99641866 -3853108 + B1_Mur2 SINE Alu 73 130 -19 3 1345 407 237 86 17 chr15 99641875 99641991 -3852983 + ID_B1 SINE B4 86 209 -15 3 1345 267 299 101 16 chr15 99641991 99642004 -3852970 + B1_Mus2 SINE Alu 5 144 -3 3 1345 533 318 6 34 chr15 99642008 99642184 -3852790 + B4 SINE B4 6 176 -116 3 1345 488 235 59 0 chr15 99642181 99642300 -3852674 + RSINE1 SINE B4 5 130 -35 3 1345 414 0 0 0 chr15 99642984 99643030 -3851944 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1345 556 15 0 0 chr15 99643380 99643448 -3851526 + B1_Mm SINE Alu 45 112 -35 4 1345 441 214 11 46 chr15 99643521 99643636 -3851338 - B1F SINE Alu -3 114 10 4 1345 438 271 16 78 chr15 99643647 99643810 -3851164 + B4 SINE B4 98 249 -43 4 1345 840 143 0 8 chr15 99643803 99643930 -3851044 - B1_Mus1 SINE Alu -12 136 11 4 1345 597 211 2 13 chr15 99643938 99644086 -3850888 - B1_Mur2 SINE Alu 0 149 6 4 1345 507 241 138 0 chr15 99644133 99644249 -3850725 + ID_B1 SINE B4 81 212 -12 4 1345 1105 141 161 86 chr15 99644529 99644808 -3850166 + MTD LTR MaLR 120 419 0 4 1345 884 129 0 7 chr15 99644905 99645053 -3849921 + (GGGA)n Simple_repeat Simple_repeat 2 148 0 4 1345 466 267 26 62 chr15 99645093 99645285 -3849689 + B3A SINE B2 1 185 -13 4 1345 1191 49 0 0 chr15 99645677 99645821 -3849153 + B1_Mm SINE Alu 2 145 -2 4 1345 994 122 0 0 chr15 99645860 99645999 -3848975 + B1_Mur4 SINE Alu 3 141 -9 4 1345 302 271 55 18 chr15 99646424 99646533 -3848441 + PB1D10 SINE Alu 4 116 -1 4 1345 736 242 52 0 chr15 99646535 99646688 -3848286 + B3 SINE B2 50 210 -6 4 1345 348 218 0 94 chr15 99646903 99647003 -3847971 - B1F SINE Alu -5 144 27 4 1345 688 221 14 7 chr15 99647270 99647416 -3847558 + B1_Mur1 SINE Alu 1 147 -2 4 1345 389 170 0 9 chr15 99647456 99647569 -3847405 + (TG)n Simple_repeat Simple_repeat 2 113 0 4 1345 203 211 77 0 chr15 99647876 99647928 -3847046 + CT-rich Low_complexity Low_complexity 3 58 0 4 1345 237 167 0 0 chr15 99647978 99648014 -3846960 - B1F SINE Alu -99 50 15 4 1345 917 177 0 4 chr15 99648122 99648401 -3846573 + CT-rich Low_complexity Low_complexity 1 277 0 4 1345 26 50 0 0 chr15 99648649 99648689 -3846285 + AT_rich Low_complexity Low_complexity 1 40 0 4 1345 263 85 21 0 chr15 99650817 99650864 -3844110 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 4 1345 324 253 0 60 chr15 99651742 99651826 -3843148 + PB1 SINE Alu 29 107 -20 4 1345 797 238 16 42 chr15 99652195 99652384 -3842590 - B4 SINE B4 -2 290 107 4 1345 315 269 89 36 chr15 99652399 99652440 -3842534 - L1MC LINE L1 -2958 3188 3144 4 1345 1677 21 0 20 chr15 99652440 99652637 -3842337 - B2_Mm1a SINE B2 0 193 1 4 1345 315 269 89 36 chr15 99652637 99652683 -3842291 - L1MC LINE L1 -3003 3143 3095 4 1345 1677 21 0 20 chr15 99652683 99652880 -3842094 - B2_Mm1a SINE B2 0 193 1 4 1345 315 269 89 36 chr15 99652880 99652903 -3842071 - L1MC LINE L1 -3052 3094 3072 4 1345 1198 67 12 24 chr15 99652915 99653084 -3841890 - B2_Mm1a SINE B2 0 193 27 4 1345 241 269 49 37 chr15 99653079 99653160 -3841814 - B4 SINE B4 -206 86 5 4 1345 637 92 23 0 chr15 99653487 99653574 -3841400 - B1_Mus2 SINE Alu -5 142 54 4 1345 233 208 34 135 chr15 99653507 99653596 -3841378 - MT2B2 LTR ERVL -306 278 199 4 1345 495 252 55 0 chr15 99654048 99654175 -3840799 + B4 SINE B4 69 202 -90 4 1345 203 360 11 0 chr15 99654213 99654302 -3840672 + (CATA)n Simple_repeat Simple_repeat 4 93 0 4 1345 208 277 0 15 chr15 99654235 99654301 -3840673 + (CATATA)n Simple_repeat Simple_repeat 6 70 0 4 1345 429 281 0 49 chr15 99654856 99654998 -3839976 + B1F1 SINE Alu 2 136 -13 4 1345 749 138 12 30 chr15 99654951 99655088 -3839886 - B3 SINE B2 -53 140 2 4 1345 314 273 88 29 chr15 99655137 99655239 -3839735 + PB1D10 SINE Alu 7 114 -3 4 1345 198 71 0 0 chr15 99655263 99655291 -3839683 + (CAGA)n Simple_repeat Simple_repeat 2 29 0 4 1345 299 271 108 72 chr15 99655402 99655420 -3839554 - B1_Mur2 SINE Alu -5 144 131 4 1345 1305 63 58 0 chr15 99655420 99655594 -3839380 + B2_Mm2 SINE B2 2 185 -10 4 1345 516 170 32 104 chr15 99655594 99655699 -3839275 - ID_B1 SINE B4 -19 205 105 4 1345 299 271 108 72 chr15 99655699 99655714 -3839260 - B1_Mur2 SINE Alu -19 130 1 4 1345 516 32 0 0 chr15 99656065 99656127 -3838847 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 1345 231 312 27 39 chr15 99656130 99656245 -3838729 + L2a LINE L2 3270 3425 -1 4 1345 653 243 37 0 chr15 99656331 99656467 -3838507 - B1F SINE Alu 0 149 9 4 1345 224 258 116 157 chr15 99656336 99656483 -3838491 - B4 SINE B4 -71 221 81 4 1345 265 257 12 75 chr15 99656638 99656718 -3838256 + PB1D7 SINE Alu 45 119 -1 4 1345 213 264 153 0 chr15 99657515 99657587 -3837387 + ID_B1 SINE B4 10 92 -132 4 1345 372 161 83 36 chr15 99657612 99657696 -3837278 + ID_B1 SINE B4 137 224 0 4 1345 219 318 259 25 chr15 99657992 99658150 -3836824 - B4A SINE B4 -13 279 85 4 1345 189 0 0 0 chr15 99658157 99658178 -3836796 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 4 1345 577 163 20 0 chr15 99658185 99658283 -3836691 - PB1D9 SINE Alu 0 120 21 4 1345 513 241 188 26 chr15 99658283 99658377 -3836597 - ID_B1 SINE B4 0 224 2 4 1345 1203 82 35 12 chr15 99658403 99658576 -3836398 + B2_Mm2 SINE B2 15 191 -4 4 1345 222 197 110 27 chr15 99658663 99658736 -3836238 - ID4_ SINE ID -1 82 4 4 1345 302 176 173 19 chr15 99658799 99658931 -3836043 + L1MC LINE L1 5501 5657 -702 4 1345 1022 73 0 7 chr15 99658944 99659081 -3835893 + B1_Mus1 SINE Alu 12 147 -1 4 1345 708 232 6 84 chr15 99659166 99659345 -3835629 - B3A SINE B2 -5 193 29 4 1345 378 314 42 69 chr15 99659359 99659480 -3835494 - B1F1 SINE Alu -8 141 24 4 1345 3402 50 0 0 chr15 99659480 99659880 -3835094 - MTB LTR MaLR 0 400 1 4 1345 378 314 42 69 chr15 99659880 99659902 -3835072 - B1F1 SINE Alu -126 23 2 4 1345 488 256 49 29 chr15 99659902 99660107 -3834867 + L1M3 LINE L1 5059 5267 -873 4 1345 26 30 0 0 chr15 99660262 99660295 -3834679 + AT_rich Low_complexity Low_complexity 1 33 0 4 1345 204 67 0 0 chr15 99660305 99660335 -3834639 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 4 1345 599 227 29 36 chr15 99660352 99660489 -3834485 + B3 SINE B2 81 216 0 4 1345 335 240 10 0 chr15 99660502 99660606 -3834368 + GA-rich Low_complexity Low_complexity 1 105 0 4 1345 189 147 0 0 chr15 99660666 99660700 -3834274 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 4 1345 251 247 73 12 chr15 99660773 99660855 -3834119 + PB1D10 SINE Alu 9 95 -22 4 1345 335 206 0 26 chr15 99660800 99660885 -3834089 - BC1_Mm scRNA scRNA -3 80 3 4 1345 247 224 52 0 chr15 99660888 99660946 -3834028 + PB1D7 SINE Alu 53 113 -7 4 1345 268 269 30 0 chr15 99660947 99661014 -3833960 + GA-rich Low_complexity Low_complexity 1 69 0 4 1345 183 129 0 0 chr15 99661015 99661046 -3833928 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 4 1345 192 77 0 0 chr15 99661380 99661406 -3833568 + (GA)n Simple_repeat Simple_repeat 2 27 0 4 1345 961 253 67 27 chr15 99661489 99661764 -3833210 - RLTR12A LTR ERVK 0 568 281 4 1345 1152 99 128 0 chr15 99661764 99661936 -3833038 - B2_Mm2 SINE B2 0 195 2 4 1345 961 253 67 27 chr15 99661936 99661957 -3833017 - RLTR12A LTR ERVK -288 280 260 4 1345 1089 206 78 17 chr15 99661966 99662264 -3832710 - RLTR12A LTR ERVK -194 334 15 4 1345 23 0 0 0 chr15 99662331 99662354 -3832620 + AT_rich Low_complexity Low_complexity 1 23 0 4 1345 757 137 0 8 chr15 99662364 99662489 -3832485 + B1_Mur4 SINE Alu 20 143 -7 4 1345 369 0 0 0 chr15 99662492 99662533 -3832441 + (CAAAC)n Simple_repeat Simple_repeat 2 42 0 4 1345 738 267 101 15 chr15 99662553 99662751 -3832223 + ID_B1 SINE B4 7 221 -3 4 1345 2471 150 50 0 chr15 99662808 99663209 -3831765 + MTC LTR MaLR 1 421 0 4 1345 519 326 28 0 chr15 99663282 99663302 -3831672 - RSINE1 SINE B4 -12 153 130 4 1345 243 0 0 0 chr15 99663302 99663329 -3831645 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 1345 519 326 28 0 chr15 99663329 99663452 -3831522 - RSINE1 SINE B4 -36 129 7 4 1345 302 247 86 0 chr15 99663821 99663902 -3831072 - ID_B1 SINE B4 -22 202 115 4 1345 255 189 0 0 chr15 99664013 99664066 -3830908 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 1345 333 129 28 21 chr15 99664073 99664215 -3830759 + L1MC4 LINE L1 6615 6757 -1285 4 1345 930 173 0 0 chr15 99664610 99664760 -3830214 - B3 SINE B2 -60 156 7 4 1345 371 216 153 10 chr15 99665100 99665198 -3829776 + PB1D10 SINE Alu 6 117 0 4 1345 851 156 7 0 chr15 99666326 99666461 -3828513 - B1_Mur3 SINE Alu -13 136 1 4 1345 21 0 0 0 chr15 99666462 99666483 -3828491 + AT_rich Low_complexity Low_complexity 1 21 0 4 1345 1458 62 15 45 chr15 99666628 99666829 -3828145 - B2_Mm2 SINE B2 0 195 1 4 1345 1069 108 127 0 chr15 99666829 99666995 -3827979 - B2_Mm2 SINE B2 -7 188 2 4 1345 474 293 25 13 chr15 99667049 99667208 -3827766 - B3A SINE B2 -35 163 3 4 1345 254 333 0 0 chr15 99667464 99667536 -3827438 + ID4 SINE ID 3 74 -9 4 1345 370 196 188 45 chr15 99667690 99667802 -3827172 + B1_Mur4 SINE Alu 23 150 0 4 1345 315 311 104 43 chr15 99667826 99667961 -3827013 + B3A SINE B2 20 170 -46 4 1345 294 29 0 0 chr15 99667970 99668005 -3826969 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 4 1345 1076 158 0 0 chr15 99668931 99669095 -3825879 + B2_Mm2 SINE B2 1 164 -31 4 1345 1276 68 0 0 chr15 99669110 99669272 -3825702 + B2_Mm2 SINE B2 1 162 -33 4 1345 180 0 0 0 chr15 99669272 99669292 -3825682 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 4 1345 180 0 0 0 chr15 99669294 99669314 -3825660 + (GA)n Simple_repeat Simple_repeat 1 20 0 4 1345 400 213 128 0 chr15 99669985 99670079 -3824895 + ID_B1 SINE B4 119 224 0 4 1345 290 265 0 24 chr15 99670182 99670267 -3824707 + ID4_ SINE ID 1 83 0 4 1345 189 0 0 0 chr15 99670379 99670400 -3824574 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1345 456 303 161 83 chr15 99670404 99670789 -3824185 + MLT1G3 LTR MaLR 27 441 -150 5 1345 754 209 186 6 chr15 99670879 99671062 -3823912 - B3 SINE B2 0 216 1 5 1345 512 289 0 0 chr15 99671062 99671166 -3823808 - B1F1 SINE Alu -41 108 5 5 1345 317 276 38 29 chr15 99671163 99671284 -3823690 - B1F SINE Alu -22 127 6 5 1345 1032 150 49 127 chr15 99671319 99671563 -3823411 - RMER4A LTR ERVK 0 466 242 5 1345 609 72 0 0 chr15 99671563 99671646 -3823328 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 5 1345 1002 38 122 0 chr15 99671654 99671785 -3823189 - B1_Mus2 SINE Alu 0 147 1 5 1345 1385 140 58 21 chr15 99671789 99672029 -3822945 - RMER4A LTR ERVK -215 251 3 5 1345 418 219 49 0 chr15 99672030 99672112 -3822862 - B1F1 SINE Alu -54 95 10 5 1345 189 0 0 0 chr15 99672127 99672148 -3822826 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1345 285 276 13 0 chr15 99672262 99672338 -3822636 + RLTR20D LTR ERVK 369 445 -123 5 1345 257 256 193 60 chr15 99672338 99672421 -3822553 + RLTR16 LTR ERVK 412 505 0 5 1345 636 186 0 0 chr15 99672612 99672714 -3822260 - B1_Mus1 SINE Alu -15 133 32 5 1345 1372 80 21 0 chr15 99672745 99672933 -3822041 - B2_Mm2 SINE B2 -2 193 2 5 1345 413 312 11 173 chr15 99673136 99673236 -3821738 + ID_B1 SINE B4 6 167 -57 5 1345 482 285 0 31 chr15 99673236 99673363 -3821611 + B1F SINE Alu 5 127 -22 5 1345 413 312 11 173 chr15 99673363 99673396 -3821578 + ID_B1 SINE B4 168 223 -1 5 1345 591 285 21 0 chr15 99673388 99673532 -3821442 + ID_B1 SINE B4 77 223 -1 5 1345 270 153 13 40 chr15 99673649 99673724 -3821250 + T-rich Low_complexity Low_complexity 3 75 0 5 1345 759 129 69 41 chr15 99673726 99673871 -3821103 - B1_Mur3 SINE Alu 0 149 1 5 1345 214 274 14 14 chr15 99674140 99674214 -3820760 - L2 LINE L2 -513 2906 2833 5 1345 279 281 149 40 chr15 99674305 99674479 -3820495 + MIR3 SINE MIR 3 195 -13 5 1345 923 84 45 8 chr15 99674993 99675125 -3819849 + B1_Mus1 SINE Alu 2 138 -10 5 1345 2454 219 92 85 chr15 99675448 99675526 -3819448 + Lx8 LINE L1 6197 6245 -1228 5 1345 1258 162 14 19 chr15 99675526 99675740 -3819234 - B3 SINE B2 -3 213 1 5 1345 2454 232 86 71 chr15 99675740 99676538 -3818436 + Lx8 LINE L1 6246 7121 -352 5 1345 453 219 105 0 chr15 99676554 99676659 -3818315 + RSINE1 SINE B4 2 117 -48 5 1345 21 0 0 0 chr15 99677577 99677598 -3817376 + AT_rich Low_complexity Low_complexity 1 21 0 5 1345 549 208 0 38 chr15 99678159 99678264 -3816710 - PB1D10 SINE Alu -16 101 1 5 1345 207 260 0 0 chr15 99678621 99678671 -3816303 + G-rich Low_complexity Low_complexity 3 52 0 5 1345 206 291 198 28 chr15 99678765 99678871 -3816103 + MIRm SINE MIR 21 144 -132 5 1345 435 271 10 0 chr15 99679155 99679251 -3815723 + RSINE1 SINE B4 3 99 -66 5 1345 1397 57 0 39 chr15 99679251 99679432 -3815542 + B2_Mm1t SINE B2 1 174 -19 5 1345 337 91 15 29 chr15 99679433 99679501 -3815473 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 5 1345 299 212 91 0 chr15 99679501 99679567 -3815407 + RSINE1 SINE B4 84 155 -10 5 1345 373 209 165 0 chr15 99679694 99679785 -3815189 + PB1D7 SINE Alu 5 110 -10 5 1345 431 304 157 6 chr15 99679837 99680009 -3814965 + MER2 DNA MER2_type 85 282 -63 5 1345 258 174 82 0 chr15 99680244 99680342 -3814632 + (TA)n Simple_repeat Simple_repeat 2 107 0 5 1345 590 99 0 0 chr15 99680344 99680425 -3814549 + B1_Mm SINE Alu 67 147 0 5 1345 22 35 0 0 chr15 99680425 99680454 -3814520 + AT_rich Low_complexity Low_complexity 1 29 0 5 1345 321 269 50 61 chr15 99680544 99680643 -3814331 + B1F2 SINE Alu 1 98 -51 5 1345 258 271 0 4 chr15 99681186 99681260 -3813714 - ID2 SINE ID -79 73 1 5 1345 825 40 0 0 chr15 99681268 99681369 -3813605 + (TCC)n Simple_repeat Simple_repeat 2 102 0 5 1345 1321 108 0 11 chr15 99681471 99681659 -3813315 - B2_Mm2 SINE B2 -9 186 1 5 1345 1586 22 0 32 chr15 99681681 99681871 -3813103 - B2_Mm1a SINE B2 -8 185 2 5 1345 880 109 0 8 chr15 99682053 99682182 -3812792 + B1_Mur4 SINE Alu 22 149 -1 5 1345 228 167 0 0 chr15 99682237 99682273 -3812701 + MurSatRep1 Unknown Unknown 229 264 -1873 5 1345 529 274 68 0 chr15 99682464 99682610 -3812364 + RSINE1 SINE B4 4 159 -6 5 1345 270 56 0 0 chr15 99682683 99682719 -3812255 + (TCTA)n Simple_repeat Simple_repeat 2 37 0 5 1345 1055 198 30 0 chr15 99682720 99682917 -3812057 - B3 SINE B2 -13 203 1 5 1345 316 220 308 0 chr15 99682925 99683016 -3811958 - ID_B1 SINE B4 -4 220 102 5 1345 295 320 107 57 chr15 99683380 99683539 -3811435 - MER5A DNA MER1_type 0 189 12 5 1345 385 229 36 116 chr15 99683647 99683674 -3811300 + B4 SINE B4 68 113 -179 5 1345 449 119 0 0 chr15 99683674 99683741 -3811233 + B1_Mus1 SINE Alu 1 67 -81 5 1345 599 57 159 0 chr15 99683739 99683827 -3811147 - B1_Mm SINE Alu -14 133 32 5 1345 385 229 36 116 chr15 99683741 99683785 -3811189 + B4 SINE B4 114 194 -98 5 1345 418 273 36 18 chr15 99683815 99683927 -3811047 + PB1D10 SINE Alu 3 116 -1 5 1345 347 198 76 137 chr15 99683927 99684138 -3810836 + B3A SINE B2 1 198 0 5 1345 180 0 0 0 chr15 99684138 99684158 -3810816 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1345 426 159 216 0 chr15 99684163 99684251 -3810723 + B3 SINE B2 2 108 -108 5 1345 518 254 9 0 chr15 99684306 99684416 -3810558 + B1_Mus2 SINE Alu 4 114 -33 5 1345 216 0 0 0 chr15 99684434 99684458 -3810516 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 5 1345 1252 41 0 0 chr15 99684577 99684724 -3810250 + B1_Mus2 SINE Alu 1 147 0 5 1345 1352 82 5 5 chr15 99684873 99685058 -3809916 + B2_Mm2 SINE B2 1 185 -10 5 1345 293 239 0 75 chr15 99685073 99685163 -3809811 + ID4_ SINE ID 23 102 -50 5 1345 369 272 71 18 chr15 99685557 99685691 -3809283 + MIR SINE MIR 17 151 -57 5 1345 229 279 59 0 chr15 99685702 99685770 -3809204 + MER112 DNA MER1_type 2 73 -188 5 1345 1021 132 0 0 chr15 99686046 99686190 -3808784 - B1_Mus2 SINE Alu -1 146 3 5 1345 1615 37 0 10 chr15 99686218 99686411 -3808563 - B2_Mm1a SINE B2 0 193 3 5 1345 271 287 52 0 chr15 99686443 99686558 -3808416 + L1M3 LINE L1 5490 5610 -579 5 1345 310 240 65 28 chr15 99686595 99686702 -3808272 + L1MB7 LINE L1 6074 6184 0 5 1345 382 178 27 0 chr15 99687205 99687278 -3807696 + B3 SINE B2 1 75 -141 5 1345 215 61 30 0 chr15 99687366 99687399 -3807575 + (TC)n Simple_repeat Simple_repeat 1 34 0 5 1345 1842 257 149 24 chr15 99687429 99688303 -3806671 - Lx6 LINE L1 -112 7348 6123 5 1345 181 171 0 0 chr15 99688424 99688459 -3806515 - MIR SINE MIR -123 139 105 5 1345 329 281 90 62 chr15 99688480 99688624 -3806350 + B1F SINE Alu 2 149 0 5 1345 231 114 0 0 chr15 99688672 99688716 -3806258 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 5 1345 1176 69 0 0 chr15 99688717 99688862 -3806112 - B1_Mus1 SINE Alu -2 146 2 5 1345 3148 51 18 10 chr15 99689007 99689404 -3805570 + MTB LTR MaLR 1 400 0 5 1345 1322 35 118 0 chr15 99689508 99689522 -3805452 - B2_Mm1a SINE B2 -4 189 176 5 1345 222 37 0 0 chr15 99689522 99689549 -3805425 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 5 1345 1322 35 118 0 chr15 99689549 99689703 -3805271 - B2_Mm1a SINE B2 -18 175 2 5 1345 336 188 102 34 chr15 99689792 99689880 -3805094 - HAL1-3A_ME LINE L1 -789 2069 1976 5 1345 234 220 17 17 chr15 99689880 99689940 -3805034 + (TATG)n Simple_repeat Simple_repeat 3 62 0 5 1345 368 313 64 39 chr15 99689940 99690096 -3804878 - RSINE1 SINE B4 -1 164 5 5 1345 386 263 54 77 chr15 99690395 99690582 -3804392 - B1F SINE Alu -123 191 10 5 1345 305 341 79 53 chr15 99690626 99690815 -3804159 - MIRb SINE MIR -12 256 63 5 1345 440 245 68 10 chr15 99690817 99690920 -3804054 + RSINE1 SINE B4 11 119 -46 5 1345 456 269 8 8 chr15 99690960 99691080 -3803894 + PB1D7 SINE Alu 1 120 0 5 1345 1367 61 39 0 chr15 99691287 99691468 -3803506 + B2_Mm1a SINE B2 1 188 -5 5 1345 410 291 76 28 chr15 99691497 99691642 -3803332 + ID_B1 SINE B4 2 153 -71 5 1345 345 273 92 69 chr15 99691650 99691780 -3803194 + RSINE1 SINE B4 11 143 -22 5 1345 452 171 0 79 chr15 99691822 99691911 -3803063 + ID_B1 SINE B4 142 223 -1 5 1345 513 137 12 0 chr15 99691972 99692064 -3802910 - B1_Mus2 SINE Alu 0 147 53 5 1345 344 204 129 0 chr15 99692075 99692168 -3802806 - PB1D10 SINE Alu 0 117 13 5 1345 393 283 71 0 chr15 99692658 99692771 -3802203 + RSINE1 SINE B4 37 157 -8 5 1345 276 30 0 0 chr15 99693342 99693375 -3801599 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 1345 756 94 85 15 chr15 99693451 99693581 -3801393 + B1_Mus1 SINE Alu 9 147 -1 5 1345 579 154 163 0 chr15 99693658 99693781 -3801193 + B1_Mus1 SINE Alu 5 147 -1 5 1345 1139 172 16 0 chr15 99694350 99694536 -3800438 - B3 SINE B2 -20 196 8 5 1345 412 255 78 0 chr15 99694558 99694660 -3800314 - ID_B1 SINE B4 -21 203 94 5 1345 525 278 146 61 chr15 99694850 99694925 -3800049 - B4A SINE B4 0 292 213 5 1345 599 39 13 0 chr15 99694925 99695003 -3799971 + (TC)n Simple_repeat Simple_repeat 1 79 0 5 1345 525 278 146 61 chr15 99695003 99695188 -3799786 - B4A SINE B4 -80 212 12 5 1345 215 289 0 0 chr15 99695444 99695489 -3799485 + polypurine Low_complexity Low_complexity 1 45 0 5 1345 798 92 92 0 chr15 99695726 99695846 -3799128 + B1_Mur4 SINE Alu 5 135 -15 5 1345 207 0 0 0 chr15 99695849 99695872 -3799102 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1345 303 335 95 87 chr15 99696246 99696658 -3798316 - L2b LINE L2 0 3375 2961 6 1345 22 0 0 0 chr15 99697437 99697459 -3797515 + AT_rich Low_complexity Low_complexity 1 22 0 6 1345 569 178 0 0 chr15 99697550 99697640 -3797334 + B3A SINE B2 1 90 -108 6 1345 252 321 18 44 chr15 99697640 99697664 -3797310 + B4 SINE B4 1 111 -181 6 1345 294 279 57 9 chr15 99697782 99697887 -3797087 - PB1D10 SINE Alu -7 110 1 6 1345 565 189 119 32 chr15 99698919 99699045 -3795929 + MTC LTR MaLR 285 421 0 6 1345 398 293 49 14 chr15 99699101 99699243 -3795731 - B1F SINE Alu -2 147 1 6 1345 406 270 10 0 chr15 99699257 99699357 -3795617 + ID_B1 SINE B4 70 170 -54 6 1345 459 202 26 96 chr15 99699271 99699386 -3795588 + PB1D10 SINE Alu 10 116 -1 6 1345 1364 89 11 0 chr15 99699826 99700016 -3794958 - B2_Mm1a SINE B2 -1 192 1 6 1345 214 75 24 48 chr15 99700245 99700287 -3794687 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 6 1345 1051 65 0 7 chr15 99700290 99700429 -3794545 - B1_Mur4 SINE Alu 0 150 13 6 1345 679 222 24 87 chr15 99700681 99700888 -3794086 + B3A SINE B2 5 198 0 6 1345 1240 48 0 0 chr15 99701180 99701326 -3793648 - B1_Mus2 SINE Alu 0 147 2 6 1345 596 255 26 32 chr15 99701483 99701637 -3793337 + RSINE1 SINE B4 13 165 0 6 1345 765 197 2 0 chr15 99701645 99702070 -3792904 + (CA)n Simple_repeat Simple_repeat 1 426 0 6 1345 425 149 26 9 chr15 99702185 99702300 -3792674 + (TG)n Simple_repeat Simple_repeat 2 118 0 6 1345 23 0 0 0 chr15 99702372 99702395 -3792579 + AT_rich Low_complexity Low_complexity 1 23 0 6 1345 1220 96 15 65 chr15 99702627 99702827 -3792147 + B2_Mm1t SINE B2 1 190 -3 6 1345 223 340 0 69 chr15 99702906 99703007 -3791967 + PB1D10 SINE Alu 1 94 -23 6 1345 256 339 48 32 chr15 99702917 99703042 -3791932 + ID_B1 SINE B4 90 216 -8 6 1345 231 36 0 0 chr15 99703789 99703817 -3791157 + (GA)n Simple_repeat Simple_repeat 1 28 0 6 1345 491 238 11 121 chr15 99704086 99704268 -3790706 + RSINE1 SINE B4 4 165 0 6 1345 852 82 0 0 chr15 99704291 99704413 -3790561 + (GAAA)n Simple_repeat Simple_repeat 2 123 0 6 1345 507 258 35 83 chr15 99704420 99704589 -3790385 + RSINE1 SINE B4 3 163 -2 6 1345 828 0 0 0 chr15 99704605 99704697 -3790277 + (TA)n Simple_repeat Simple_repeat 2 93 0 6 1345 382 272 107 0 chr15 99704702 99704805 -3790169 + B1_Mur1 SINE Alu 2 115 -34 6 1345 213 226 0 0 chr15 99704814 99704867 -3790107 + GA-rich Low_complexity Low_complexity 3 55 0 6 1345 23 0 0 0 chr15 99705862 99705885 -3789089 + GC_rich Low_complexity Low_complexity 1 23 0 6 1345 241 254 53 66 chr15 99706260 99706336 -3788638 + MIR3 SINE MIR 101 175 -33 6 1345 324 263 9 116 chr15 99706407 99706519 -3788455 - ID_B1 SINE B4 -3 221 122 6 1345 438 212 0 50 chr15 99706494 99706613 -3788361 + B3A SINE B2 86 198 0 6 1345 216 308 25 13 chr15 99706986 99707065 -3787909 + PB1D7 SINE Alu 41 120 0 6 1345 198 0 0 0 chr15 99707215 99707237 -3787737 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 6 1345 298 345 58 44 chr15 99707249 99707455 -3787519 - MER57D LTR ERV1 -96 315 107 6 1345 1176 91 41 18 chr15 99707456 99707666 -3787308 - MTB LTR MaLR -204 203 1 6 1345 243 88 0 0 chr15 99707787 99707821 -3787153 + (CAA)n Simple_repeat Simple_repeat 3 36 0 6 1345 1696 16 11 0 chr15 99707835 99708026 -3786948 + B2_Mm1a SINE B2 1 193 0 6 1345 1618 37 0 10 chr15 99708182 99708374 -3786600 - B2_Mm2 SINE B2 -5 190 1 6 1345 300 309 69 44 chr15 99708435 99708594 -3786380 + RSINE1 SINE B4 3 165 0 6 1345 1682 11 21 0 chr15 99708685 99708874 -3786100 - B2_Mm1a SINE B2 0 193 1 6 1345 301 256 122 147 chr15 99708891 99708911 -3786063 + B4 SINE B4 77 224 -64 6 1345 597 212 91 0 chr15 99708911 99709043 -3785931 + B1F SINE Alu 1 144 -5 6 1345 450 294 66 7 chr15 99709040 99709177 -3785797 - MER58A DNA MER1_type -24 200 56 6 1345 603 267 49 43 chr15 99709188 99709372 -3785602 - ID_B1 SINE B4 -39 185 1 6 1345 558 151 170 0 chr15 99709730 99709836 -3785138 - B1_Mus1 SINE Alu -1 147 24 6 1345 652 252 14 0 chr15 99709877 99710020 -3784954 + B1_Mur1 SINE Alu 4 148 -1 6 1345 522 284 63 0 chr15 99710037 99710164 -3784810 + RSINE1 SINE B4 5 139 -26 6 1345 303 281 54 0 chr15 99710261 99710344 -3784630 - ID4_ SINE ID -61 91 5 6 1345 532 123 0 0 chr15 99711230 99711303 -3783671 + B2_Mm2 SINE B2 1 73 -122 6 1345 544 131 24 0 chr15 99711371 99711455 -3783519 + B2_Mm2 SINE B2 83 168 -27 6 1345 309 302 82 44 chr15 99711844 99711979 -3782995 + B4A SINE B4 85 224 -68 6 1345 904 251 80 83 chr15 99712101 99712462 -3782512 + RLTR14 LTR ERV1 10 369 -13 6 1345 760 203 0 7 chr15 99712533 99712672 -3782302 + B1_Mus2 SINE Alu 5 142 -5 6 1345 183 42 0 0 chr15 99712672 99712696 -3782278 + (CAGG)n Simple_repeat Simple_repeat 2 25 0 6 1345 247 170 0 96 chr15 99712705 99712757 -3782217 + ID_B1 SINE B4 114 160 -64 6 1345 236 281 0 58 chr15 99712757 99712792 -3782182 + PB1D9 SINE Alu 33 114 -6 6 1345 476 262 26 40 chr15 99712792 99712943 -3782031 + B1_Mur1 SINE Alu 1 149 0 6 1345 416 235 8 92 chr15 99712989 99713054 -3781920 + ID_B1 SINE B4 102 167 -57 6 1345 1241 146 26 31 chr15 99713054 99713280 -3781694 + URR1B DNA MER1_type 1 225 0 6 1345 1847 211 109 143 chr15 99713290 99713920 -3781054 - RMER19C LTR ERVK -2 609 1 6 1345 416 235 8 92 chr15 99713920 99713974 -3781000 + ID_B1 SINE B4 170 221 -3 6 1345 1521 58 0 16 chr15 99715125 99715317 -3779657 - B2_Mm1t SINE B2 -4 189 1 6 1345 778 186 7 33 chr15 99715338 99715488 -3779486 - B1_Mus2 SINE Alu -1 146 1 6 1345 557 194 97 0 chr15 99715551 99715654 -3779320 - B1_Mur2 SINE Alu -10 139 27 6 1345 213 219 0 0 chr15 99715925 99715966 -3779008 + B1_Mus1 SINE Alu 11 51 -97 6 1345 2362 80 85 9 chr15 99716228 99716569 -3778405 - MTB LTR MaLR -33 367 1 6 1345 1347 81 38 5 chr15 99717021 99717207 -3777767 - B2_Mm2 SINE B2 -1 194 3 6 1345 848 178 0 0 chr15 99717293 99717428 -3777546 - B1_Mur4 SINE Alu -6 144 10 6 1345 326 237 0 139 chr15 99717331 99717439 -3777535 - MT2B LTR ERVL -343 258 166 6 1345 3547 103 15 78 chr15 99717529 99717859 -3777115 + LTRIS2 LTR ERV1 1 296 -268 6 1345 1079 71 50 0 chr15 99717859 99717999 -3776975 - B1_Mm SINE Alu 0 147 1 6 1345 3547 103 15 78 chr15 99717999 99718270 -3776704 + LTRIS2 LTR ERV1 297 564 0 6 1345 1020 88 0 21 chr15 99718405 99718545 -3776429 + B1_Mus1 SINE Alu 2 138 -10 6 1345 888 222 15 25 chr15 99718594 99718793 -3776181 + B3 SINE B2 7 203 -13 6 1345 376 284 17 0 chr15 99718798 99718914 -3776060 + (CA)n Simple_repeat Simple_repeat 1 118 0 6 1345 244 274 82 0 chr15 99718918 99718991 -3775983 - RSINE1 SINE B4 -5 160 82 6 1345 182 151 38 0 chr15 99719233 99719286 -3775688 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 6 1345 391 200 0 0 chr15 99719481 99719551 -3775423 - B1_Mur4 SINE Alu -6 144 75 6 1345 290 219 16 0 chr15 99719541 99719605 -3775369 + ID_B1 SINE B4 152 216 -8 6 1345 236 163 82 0 chr15 99719561 99719610 -3775364 + PB1D7 SINE Alu 65 117 -3 6 1345 183 277 21 0 chr15 99720056 99720103 -3774871 - L4 LINE RTE -658 1371 1324 6 1345 1360 94 11 0 chr15 99720359 99720550 -3774424 - B2_Mm2 SINE B2 -2 193 1 6 1345 907 167 0 0 chr15 99720560 99720698 -3774276 - B1_Mur1 SINE Alu -7 142 5 6 1345 227 316 0 62 chr15 99721776 99721857 -3773117 - ID_B1 SINE B4 -65 159 84 6 1345 24 0 0 0 chr15 99721858 99721882 -3773092 + GC_rich Low_complexity Low_complexity 1 24 0 6 1345 274 207 96 164 chr15 99721891 99721995 -3772979 - B1F1 SINE Alu -52 97 1 6 1345 206 128 26 0 chr15 99722001 99722040 -3772934 + (TCTG)n Simple_repeat Simple_repeat 4 43 0 6 1345 584 189 72 43 chr15 99722108 99722246 -3772728 - B1_Mur2 SINE Alu -7 142 1 6 1345 959 161 194 0 chr15 99722442 99722622 -3772352 - B3 SINE B2 0 216 2 6 1345 311 109 0 0 chr15 99722666 99722712 -3772262 + B1_Mus2 SINE Alu 100 145 -2 6 1345 259 306 28 0 chr15 99722769 99722841 -3772133 - MER58C DNA MER1_type -106 109 36 6 1345 599 294 167 43 chr15 99723010 99723334 -3771640 + MTEa LTR MaLR 1 364 -15 6 1345 468 202 83 0 chr15 99723347 99723456 -3771518 + PB1D7 SINE Alu 2 119 -1 6 1345 2134 157 31 28 chr15 99723513 99723726 -3771248 + RLTR14 LTR ERV1 22 234 -148 6 1345 207 0 0 0 chr15 99723726 99723749 -3771225 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 1345 2134 157 31 28 chr15 99723749 99723895 -3771079 + RLTR14 LTR ERV1 235 382 0 6 1345 465 237 21 0 chr15 99723984 99724077 -3770897 + B1_Mus2 SINE Alu 12 106 -41 6 1345 3785 132 152 15 chr15 99724050 99724720 -3770254 - RMER13A LTR ERVK -98 762 1 6 1345 391 183 0 27 chr15 99724720 99724791 -3770183 + B1_Mur2 SINE Alu 80 148 -1 6 1345 22 0 0 0 chr15 99724791 99724813 -3770161 + AT_rich Low_complexity Low_complexity 1 22 0 6 1345 204 67 0 0 chr15 99724840 99724870 -3770104 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 6 1345 1190 62 7 0 chr15 99724870 99725014 -3769960 - B1_Mus1 SINE Alu -3 145 1 6 1345 1394 79 21 10 chr15 99725020 99725212 -3769762 - B2_Mm2 SINE B2 0 195 2 6 1345 180 0 0 0 chr15 99725612 99725632 -3769342 + (TGGGGG)n Simple_repeat Simple_repeat 5 24 0 7 1345 657 167 0 0 chr15 99725901 99726027 -3768947 + (TG)n Simple_repeat Simple_repeat 2 127 0 7 1345 467 227 23 98 chr15 99726096 99726151 -3768823 - B4 SINE B4 -168 124 80 7 1345 1350 88 22 6 chr15 99726151 99726334 -3768640 + B2_Mm2 SINE B2 1 186 -9 7 1345 467 227 23 98 chr15 99726334 99726410 -3768564 - B4 SINE B4 -213 79 3 7 1345 481 284 95 47 chr15 99726429 99726577 -3768397 + RSINE1 SINE B4 2 156 -9 7 1345 332 272 65 0 chr15 99726669 99726761 -3768213 - B1F SINE Alu -51 98 1 7 1345 372 266 13 0 chr15 99726684 99726763 -3768211 - ID_B1 SINE B4 -65 159 80 7 1345 815 264 30 0 chr15 99726932 99727129 -3767845 - B3 SINE B2 -13 203 1 7 1345 324 0 0 0 chr15 99727317 99727353 -3767621 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1345 280 173 53 147 chr15 99727367 99727462 -3767512 - B1_Mm SINE Alu -1 146 61 7 1345 267 299 57 57 chr15 99727773 99727897 -3767077 + MLT1F1 LTR MaLR 276 399 -170 7 1345 203 194 0 0 chr15 99727901 99727937 -3767037 + T-rich Low_complexity Low_complexity 1 36 0 7 1345 648 241 0 8 chr15 99727953 99728087 -3766887 - B1_Mur3 SINE Alu -12 137 5 7 1345 222 288 14 14 chr15 99729216 99729290 -3765684 - PB1D7 SINE Alu -14 106 33 7 1345 690 213 56 49 chr15 99729377 99729487 -3765487 - B1_Mus2 SINE Alu -1 146 34 7 1345 3471 24 66 5 chr15 99729487 99729898 -3765076 + RLTR10C LTR ERVK 1 436 0 7 1345 690 213 56 49 chr15 99729898 99729930 -3765044 - B1_Mus2 SINE Alu -114 33 3 7 1345 894 192 46 46 chr15 99729931 99730127 -3764847 - B3A SINE B2 -2 196 1 7 1345 1203 43 0 0 chr15 99730924 99731062 -3763912 + B1_Mus2 SINE Alu 3 140 -7 7 1345 873 218 69 30 chr15 99731184 99731387 -3763587 - B3 SINE B2 -2 214 4 7 1345 463 242 219 0 chr15 99731419 99731547 -3763427 - RSINE1 SINE B4 -4 161 6 7 1345 924 181 46 46 chr15 99731784 99731981 -3762993 - B3A SINE B2 0 198 2 7 1345 1844 115 39 68 chr15 99731999 99732335 -3762639 + ORR1A3 LTR MaLR 1 326 0 7 1345 180 0 0 0 chr15 99732348 99732368 -3762606 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1345 900 45 0 0 chr15 99732368 99732480 -3762494 + B1_Mus2 SINE Alu 36 147 0 7 1345 260 272 53 111 chr15 99732491 99732517 -3762457 - B2_Mm2 SINE B2 -14 181 3 7 1345 644 275 12 24 chr15 99732517 99732681 -3762293 - RSINE1 SINE B4 0 165 4 7 1345 824 226 14 36 chr15 99732841 99733061 -3761913 - B3 SINE B2 -1 215 1 7 1345 335 311 19 0 chr15 99733413 99733519 -3761455 - MER63D DNA AcHobo -843 218 111 7 1345 388 262 103 0 chr15 99733520 99733627 -3761347 + B1F SINE Alu 2 119 -30 7 1345 265 324 73 9 chr15 99733656 99733765 -3761209 - MER63D DNA AcHobo -944 117 2 7 1345 238 344 111 47 chr15 99733921 99734092 -3760882 - LTR16A LTR ERVL -165 286 105 7 1345 688 186 73 15 chr15 99734306 99734442 -3760532 + B1_Mur2 SINE Alu 5 148 -1 7 1345 585 200 67 164 chr15 99734586 99734885 -3760089 - Lx9 LINE L1 -4 7640 7371 7 1345 215 296 171 12 chr15 99735037 99735119 -3759855 - ID_B1 SINE B4 -36 188 94 7 1345 288 111 0 0 chr15 99735144 99735189 -3759785 + (TTCC)n Simple_repeat Simple_repeat 1 45 0 7 1345 288 310 0 83 chr15 99735190 99735299 -3759675 - PB1D7 SINE Alu -6 114 15 7 1345 425 227 30 20 chr15 99735772 99735871 -3759103 + B1F SINE Alu 50 149 0 7 1345 1483 54 21 0 chr15 99736014 99736200 -3758774 - B2_Mm2 SINE B2 -5 190 1 7 1345 587 290 27 49 chr15 99736205 99736390 -3758584 - B3A SINE B2 -3 195 15 7 1345 1222 48 7 0 chr15 99736430 99736575 -3758399 - B1_Mus2 SINE Alu 0 147 2 7 1345 697 204 61 0 chr15 99736599 99736731 -3758243 - RSINE1 SINE B4 -19 146 7 7 1345 535 250 25 13 chr15 99736769 99736927 -3758047 - B3A SINE B2 -16 182 23 7 1345 544 209 18 18 chr15 99736997 99737109 -3757865 - B1F SINE Alu -37 112 1 7 1345 1744 10 0 0 chr15 99737156 99737348 -3757626 + B2_Mm1a SINE B2 2 193 0 7 1345 1030 112 0 7 chr15 99737394 99737547 -3757427 + B2_Mm1a SINE B2 35 186 -7 7 1345 189 0 0 0 chr15 99737566 99737587 -3757387 + (A)n Simple_repeat Simple_repeat 1 21 0 7 1345 229 231 185 0 chr15 99737595 99737660 -3757314 + B1_Mus2 SINE Alu 1 77 -70 7 1345 451 255 48 19 chr15 99737929 99738033 -3756941 - B1_Mur1 SINE Alu -39 110 4 7 1345 833 196 174 0 chr15 99738092 99738276 -3756698 + ID_B1 SINE B4 2 217 -7 7 1345 1121 223 38 47 chr15 99738413 99738854 -3756120 - MT2B LTR ERVL 0 601 12 7 1345 673 234 34 23 chr15 99738856 99739031 -3755943 - B3A SINE B2 -18 180 4 7 1345 407 280 11 0 chr15 99739159 99739252 -3755722 - PB1D10 SINE Alu -23 94 1 7 1345 1082 99 111 6 chr15 99739537 99739709 -3755265 + B2_Mm2 SINE B2 3 192 -3 7 1345 246 239 13 90 chr15 99739743 99739821 -3755153 - B4A SINE B4 -81 211 140 7 1345 261 267 31 94 chr15 99739915 99740043 -3754931 - PB1D7 SINE Alu 0 120 1 7 1345 258 56 0 0 chr15 99740063 99740099 -3754875 + (T)n Simple_repeat Simple_repeat 1 36 0 7 1345 1241 61 0 0 chr15 99740103 99740250 -3754724 - B1_Mus2 SINE Alu 0 147 1 7 1345 1134 44 44 0 chr15 99740338 99740474 -3754500 + B1_Mus1 SINE Alu 1 142 -6 7 1345 236 294 59 23 chr15 99740718 99740820 -3754154 + B1F SINE Alu 7 118 -2 7 1345 180 0 0 0 chr15 99740835 99740855 -3754119 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 7 1345 565 270 98 30 chr15 99741024 99741239 -3753735 + B3A SINE B2 3 216 0 7 1345 23 0 0 0 chr15 99741239 99741262 -3753712 + AT_rich Low_complexity Low_complexity 1 23 0 7 1345 661 268 167 0 chr15 99741288 99741456 -3753518 + B3 SINE B2 5 200 -16 7 1345 230 323 29 29 chr15 99741501 99741603 -3753371 + PB1D9 SINE Alu 17 118 -2 7 1345 2604 74 3 0 chr15 99741633 99741958 -3753016 + ORR1A2 LTR MaLR 1 326 -1 7 1345 206 118 0 0 chr15 99741972 99742006 -3752968 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 7 1345 476 250 120 0 chr15 99742018 99742126 -3752848 + RSINE1 SINE B4 2 122 -43 7 1345 396 0 0 0 chr15 99742126 99742170 -3752804 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1345 180 0 0 0 chr15 99742170 99742189 -3752785 + (GA)n Simple_repeat Simple_repeat 2 21 0 7 1345 190 380 104 37 chr15 99742191 99742298 -3752676 - L2 LINE L2 -1247 2172 2060 7 1345 596 248 35 7 chr15 99742298 99742440 -3752534 - B1F2 SINE Alu -2 147 2 7 1345 190 380 104 37 chr15 99742440 99742600 -3752374 - L2 LINE L2 -1360 2059 1888 7 1345 722 164 14 0 chr15 99742600 99742740 -3752234 + CT-rich Low_complexity Low_complexity 2 143 0 7 1345 404 204 79 11 chr15 99742775 99742864 -3752110 - PB1D10 SINE Alu -20 97 3 7 1345 189 360 13 0 chr15 99742907 99742982 -3751992 - L2 LINE L2 -1541 1878 1803 7 1345 693 229 28 7 chr15 99742983 99743128 -3751846 - B1_Mur1 SINE Alu -1 148 1 7 1345 1223 68 0 0 chr15 99743138 99743285 -3751689 - B1_Mus1 SINE Alu 0 148 2 7 1345 21 0 0 0 chr15 99743309 99743330 -3751644 + AT_rich Low_complexity Low_complexity 1 21 0 7 1345 534 129 0 0 chr15 99743352 99743437 -3751537 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 7 1345 229 103 0 25 chr15 99743438 99743478 -3751496 - B3A SINE B2 -158 40 2 7 1345 189 0 0 0 chr15 99743768 99743789 -3751185 + (TG)n Simple_repeat Simple_repeat 1 21 0 7 1345 592 244 30 24 chr15 99743819 99743964 -3751010 + ID_B1 SINE B4 84 227 -65 7 1345 760 223 67 38 chr15 99743970 99744180 -3750794 + B3 SINE B2 1 216 0 7 1345 1135 256 35 21 chr15 99744185 99744427 -3750547 + B4A SINE B4 2 251 -41 7 1345 3116 40 53 0 chr15 99744427 99744803 -3750171 - MTA_Mm LTR MaLR 0 396 1 7 1345 1135 256 35 21 chr15 99744803 99744847 -3750127 + B4A SINE B4 252 292 0 7 1345 234 0 0 0 chr15 99744880 99744906 -3750068 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 1345 389 340 68 91 chr15 99744930 99745383 -3749591 - L2 LINE L2 -1906 1513 1071 7 1345 332 221 84 28 chr15 99745501 99745608 -3749366 + B3A SINE B2 70 182 -16 7 1346 180 0 0 0 chr15 99745799 99745819 -3749155 + (CCCCCA)n Simple_repeat Simple_repeat 5 24 0 7 1346 1117 44 0 7 chr15 99746403 99746541 -3748433 - B1_Mus1 SINE Alu 0 148 12 7 1346 536 239 40 92 chr15 99746405 99746557 -3748417 - B4 SINE B4 -69 223 80 7 1346 406 236 70 34 chr15 99746654 99746827 -3748147 - PB1D10 SINE Alu 0 150 5 7 1346 198 0 0 0 chr15 99747224 99747246 -3747728 + (TG)n Simple_repeat Simple_repeat 1 22 0 7 1346 832 231 88 44 chr15 99747278 99747536 -3747438 - B4A SINE B4 -6 286 2 7 1346 524 300 60 74 chr15 99747694 99747910 -3747064 - B3 SINE B2 0 216 4 7 1346 659 294 5 47 chr15 99747953 99748167 -3746807 - ID_B1 SINE B4 -17 207 3 7 1346 1264 34 0 0 chr15 99748233 99748379 -3746595 - B1_Mm SINE Alu 0 147 2 7 1346 201 39 0 0 chr15 99748400 99748426 -3746548 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 7 1346 530 273 60 98 chr15 99748426 99748641 -3746333 - B3 SINE B2 -9 207 1 7 1346 233 259 17 17 chr15 99748661 99748720 -3746254 - ID_B1 SINE B4 -53 171 113 7 1346 953 121 42 7 chr15 99749447 99749589 -3745385 + B1_Mus2 SINE Alu 1 147 0 7 1346 246 341 12 47 chr15 99749614 99749700 -3745274 + U4 snRNA snRNA 18 100 -45 7 1346 750 168 278 12 chr15 99749870 99750039 -3744935 + B3 SINE B2 3 216 0 7 1346 515 268 252 22 chr15 99750096 99750500 -3744474 + L1MCa LINE L1 35 531 -5977 7 1346 967 166 82 64 chr15 99750715 99750934 -3744040 + URR1A DNA MER1_type 2 224 -2 8 1346 249 225 11 22 chr15 99750978 99751069 -3743905 + CT-rich Low_complexity Low_complexity 3 92 0 8 1346 229 329 0 26 chr15 99751075 99751153 -3743821 - PB1D10 SINE Alu -41 76 1 8 1346 1664 16 16 0 chr15 99751365 99751555 -3743419 - B2_Mm1a SINE B2 0 193 1 8 1346 1346 222 24 45 chr15 99751564 99751894 -3743080 - ORR1D2-int LTR MaLR -1047 323 1 8 1346 1197 62 0 20 chr15 99751978 99752127 -3742847 - B1_Mus1 SINE Alu -1 147 2 8 1346 1020 123 0 40 chr15 99752133 99752285 -3742689 - B1_Mus1 SINE Alu -2 146 1 8 1346 1161 256 18 29 chr15 99752305 99752586 -3742388 - ORR1D2 LTR MaLR -57 313 36 8 1346 378 42 0 0 chr15 99752752 99752800 -3742174 + (TC)n Simple_repeat Simple_repeat 1 48 0 8 1346 229 86 29 0 chr15 99752920 99752955 -3742019 - ORR1D2 LTR MaLR -334 36 1 8 1346 233 231 0 37 chr15 99752993 99753047 -3741927 - B4 SINE B4 -217 75 24 8 1346 633 193 99 78 chr15 99753061 99753252 -3741722 - B3A SINE B2 -1 197 3 8 1346 198 0 0 0 chr15 99753273 99753295 -3741679 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 8 1346 268 304 23 6 chr15 99753741 99753926 -3741048 + L1M5 LINE L1 5681 5873 -486 8 1346 682 254 28 85 chr15 99753987 99754198 -3740776 + ID_B1 SINE B4 24 222 -2 8 1346 200 262 0 0 chr15 99754198 99754240 -3740734 + G-rich Low_complexity Low_complexity 3 44 0 8 1346 365 259 216 72 chr15 99754374 99754675 -3740299 - MTEa LTR MaLR -4 375 32 8 1346 310 366 20 0 chr15 99754691 99754792 -3740182 - ID_B1 SINE B4 -39 185 83 8 1346 284 305 17 29 chr15 99754869 99755041 -3739933 + (TG)n Simple_repeat Simple_repeat 1 170 0 8 1346 312 307 11 33 chr15 99755071 99755253 -3739721 + (TG)n Simple_repeat Simple_repeat 1 178 0 8 1346 266 295 5 64 chr15 99755203 99755391 -3739583 + (TATG)n Simple_repeat Simple_repeat 4 180 0 8 1346 284 285 34 34 chr15 99755340 99755518 -3739456 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 8 1346 280 320 11 33 chr15 99755464 99755645 -3739329 + (TG)n Simple_repeat Simple_repeat 2 178 0 8 1346 207 293 0 39 chr15 99755658 99755761 -3739213 + (TATATG)n Simple_repeat Simple_repeat 6 104 0 8 1346 254 164 0 18 chr15 99755787 99755843 -3739131 + (TA)n Simple_repeat Simple_repeat 2 56 0 8 1346 272 311 17 29 chr15 99755855 99755938 -3739036 + (TG)n Simple_repeat Simple_repeat 1 82 0 8 1346 201 39 0 0 chr15 99755938 99755964 -3739010 + (TAGA)n Simple_repeat Simple_repeat 4 29 0 8 1346 303 277 8 25 chr15 99755964 99756117 -3738857 + (TATATG)n Simple_repeat Simple_repeat 1 150 0 8 1346 219 69 0 0 chr15 99756163 99756192 -3738782 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 1346 551 258 54 33 chr15 99756200 99756384 -3738590 - B4A SINE B4 -3 289 102 8 1346 240 338 86 65 chr15 99756536 99756675 -3738299 - B4A SINE B4 -150 142 1 8 1346 338 281 34 0 chr15 99756684 99756773 -3738201 - PB1D7 SINE Alu -8 112 21 8 1346 307 238 48 0 chr15 99756925 99756988 -3737986 - ID4 SINE ID 0 83 18 8 1346 583 167 0 30 chr15 99757012 99757111 -3737863 - PB1D10 SINE Alu 0 117 22 8 1346 663 255 14 0 chr15 99757499 99757640 -3737334 - B1_Mur1 SINE Alu -6 143 1 8 1346 234 0 0 0 chr15 99757664 99757690 -3737284 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 8 1346 288 304 9 89 chr15 99757698 99757810 -3737164 - PB1 SINE Alu -18 109 5 8 1346 456 214 17 0 chr15 99758592 99758765 -3736209 + GA-rich Low_complexity Low_complexity 2 177 0 8 1346 1115 110 11 34 chr15 99758782 99758961 -3736013 + B2_Mm2 SINE B2 1 175 -20 8 1346 271 288 138 41 chr15 99759116 99759239 -3735735 - RSINE1 SINE B4 -28 137 3 8 1346 308 309 69 52 chr15 99759303 99759419 -3735555 - RSINE1 SINE B4 -39 126 9 8 1346 1320 96 26 11 chr15 99759480 99759670 -3735304 + B2_Mm2 SINE B2 2 194 -1 8 1346 630 143 9 14 chr15 99759696 99759819 -3735155 + PB1D9 SINE Alu 1 120 0 8 1346 274 56 494 0 chr15 99759908 99759995 -3734979 - B2_Mm2 SINE B2 -6 189 60 8 1346 1430 86 5 0 chr15 99759995 99760182 -3734792 - B2_Mm1t SINE B2 -5 188 1 8 1346 203 133 0 0 chr15 99760475 99760505 -3734469 + (G)n Simple_repeat Simple_repeat 1 30 0 8 1346 1060 189 23 19 chr15 99760789 99761004 -3733970 - URR1B DNA MER1_type -9 216 1 8 1346 323 208 56 0 chr15 99761306 99761378 -3733596 - B1F1 SINE Alu 0 149 74 8 1346 923 159 0 14 chr15 99761397 99761537 -3733437 + B1_Mur4 SINE Alu 1 138 -12 8 1346 336 48 0 0 chr15 99761537 99761579 -3733395 + (GAAA)n Simple_repeat Simple_repeat 1 42 0 8 1346 275 281 150 40 chr15 99761651 99761751 -3733223 + ID_B1 SINE B4 79 189 -35 8 1346 362 227 142 85 chr15 99761663 99761769 -3733205 + B1F2 SINE Alu 6 117 0 8 1346 279 284 40 13 chr15 99762548 99762623 -3732351 + B3A SINE B2 86 162 -36 8 1346 348 264 2 4 chr15 99762901 99762980 -3731994 + B1F SINE Alu 12 89 -38 8 1346 266 330 247 34 chr15 99763134 99763434 -3731540 + MLT1C LTR MaLR 51 414 -53 8 1346 567 252 35 43 chr15 99763486 99763627 -3731347 - B1F SINE Alu -9 140 1 8 1346 431 286 6 93 chr15 99763627 99763648 -3731326 - ID_B1 SINE B4 -9 215 68 8 1346 759 163 14 47 chr15 99763743 99763891 -3731083 + B1_Mur2 SINE Alu 7 149 0 8 1346 236 100 0 24 chr15 99764148 99764189 -3730785 + (GAAA)n Simple_repeat Simple_repeat 1 40 0 8 1346 867 123 21 28 chr15 99764361 99764503 -3730471 + B1_Mur4 SINE Alu 8 148 -2 8 1346 370 228 12 25 chr15 99764630 99764711 -3730263 + PB1D10 SINE Alu 24 103 -14 8 1346 588 40 0 0 chr15 99764713 99764788 -3730186 + (CA)n Simple_repeat Simple_repeat 2 76 0 8 1346 549 203 116 36 chr15 99764856 99764994 -3729980 - RSINE1 SINE B4 -16 149 1 8 1346 1884 120 128 74 chr15 99765062 99765413 -3729561 + ORR1B1 LTR MaLR 1 370 -24 8 1346 806 181 0 7 chr15 99765418 99765557 -3729417 - B1_Mus1 SINE Alu -10 138 1 8 1346 571 218 0 0 chr15 99765654 99765755 -3729219 - ID_B1 SINE B4 -9 215 115 8 1346 268 258 0 88 chr15 99765930 99765998 -3728976 - tRNA-Ala-GCA tRNA tRNA -12 63 2 8 1346 1120 204 0 0 chr15 99766092 99766278 -3728696 + B3 SINE B2 1 186 -30 8 1346 275 105 0 0 chr15 99766278 99766316 -3728658 + RMER6A LTR ERVK 1 38 -682 8 1346 3435 132 76 12 chr15 99766328 99766933 -3728041 + RMER6A LTR ERVK 113 756 0 8 1346 180 0 0 0 chr15 99766956 99766976 -3727998 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 8 1346 1001 113 28 2 chr15 99767075 99767535 -3727439 + (CA)n Simple_repeat Simple_repeat 1 472 0 8 1346 619 164 18 35 chr15 99767587 99767701 -3727273 - PB1D9 SINE Alu 0 120 9 8 1346 360 267 54 107 chr15 99767621 99767789 -3727185 - B4 SINE B4 -113 179 21 8 1346 357 275 110 0 chr15 99767872 99767963 -3727011 - PB1D10 SINE Alu -5 112 12 8 1346 711 0 0 0 chr15 99767965 99768044 -3726930 + (GGAGA)n Simple_repeat Simple_repeat 1 79 0 8 1346 1815 168 110 54 chr15 99768059 99768468 -3726506 + RLTR20C LTR ERVK 1 432 -102 8 1346 420 37 0 0 chr15 99768468 99768522 -3726452 + (TG)n Simple_repeat Simple_repeat 2 55 0 8 1346 459 234 105 49 chr15 99768522 99768594 -3726380 + RLTR20C LTR ERVK 440 519 -22 8 1346 232 378 54 9 chr15 99768571 99768604 -3726370 + B1F SINE Alu 32 64 -85 8 1346 450 0 0 0 chr15 99768604 99768654 -3726320 + (CAG)n Simple_repeat Simple_repeat 1 50 0 8 1346 232 378 54 9 chr15 99768654 99768732 -3726242 + B1F SINE Alu 65 148 -1 8 1346 390 271 67 17 chr15 99768738 99768858 -3726116 + B1F SINE Alu 24 149 0 8 1346 544 219 28 37 chr15 99769046 99769174 -3725800 - B1_Mur1 SINE Alu -20 127 2 8 1346 333 319 16 48 chr15 99769062 99769187 -3725787 - ID_B1 SINE B4 -34 190 70 8 1346 566 265 0 22 chr15 99769202 99769341 -3725633 - ID_B1 SINE B4 -2 222 87 8 1346 626 206 49 14 chr15 99769452 99769595 -3725379 + B1F SINE Alu 1 148 -1 8 1346 253 227 130 120 chr15 99769684 99769784 -3725190 + B4A SINE B4 192 292 0 8 1346 734 261 84 11 chr15 99769936 99770126 -3724848 + B3 SINE B2 8 211 -5 8 1346 213 121 0 0 chr15 99776657 99776690 -3718284 + (CCG)n Simple_repeat Simple_repeat 2 34 0 8 1346 257 155 17 0 chr15 99778350 99778408 -3716566 + (TA)n Simple_repeat Simple_repeat 2 60 0 8 1346 267 307 17 9 chr15 99778495 99778610 -3716364 + L1MC3 LINE L1 7051 7166 -619 8 1346 530 151 19 112 chr15 99778656 99778809 -3716165 - B1F2 SINE Alu -2 147 1 8 1346 594 318 14 36 chr15 99778809 99778933 -3716041 - B4A SINE B4 -63 229 110 8 1346 1395 79 16 21 chr15 99778933 99779126 -3715848 - B2_Mm2 SINE B2 -3 192 1 8 1346 594 318 14 36 chr15 99779126 99779221 -3715753 - B4A SINE B4 -183 109 15 8 1346 3623 102 93 39 chr15 99779289 99779367 -3715607 - RLTR33 LTR ERVK 0 678 607 8 1346 5793 124 34 8 chr15 99779367 99780246 -3714728 - RMER19B LTR ERVK 0 902 1 8 1346 3623 102 93 39 chr15 99780246 99780624 -3714350 - RLTR33 LTR ERVK -72 606 200 8 1346 281 26 26 0 chr15 99780624 99780662 -3714312 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 8 1346 1183 51 0 0 chr15 99780662 99780800 -3714174 - B1_Mus1 SINE Alu -8 140 3 8 1346 3623 102 93 39 chr15 99780800 99780984 -3713990 - RLTR33 LTR ERVK -479 199 2 8 1346 1327 97 43 0 chr15 99781054 99781240 -3713734 + B2_Mm2 SINE B2 2 195 0 8 1346 1263 58 15 36 chr15 99781361 99781377 -3713597 + B2_Mm2 SINE B2 1 16 -179 8 1346 2973 53 53 8 chr15 99781377 99781756 -3713218 - MTA_Mm LTR MaLR 0 396 1 8 1346 1263 58 15 36 chr15 99781756 99781935 -3713039 + B2_Mm2 SINE B2 17 192 -3 8 1346 433 167 122 0 chr15 99781936 99782026 -3712948 + B1_Mus1 SINE Alu 1 101 -47 8 1346 356 266 0 0 chr15 99782048 99782127 -3712847 - PB1D10 SINE Alu -24 93 15 8 1346 1201 55 0 0 chr15 99782131 99782276 -3712698 + B1_Mus2 SINE Alu 3 147 0 8 1346 1169 98 0 6 chr15 99782311 99782486 -3712488 + (TTC)n Simple_repeat Simple_repeat 3 176 0 8 1346 223 158 0 26 chr15 99782488 99782527 -3712447 + CT-rich Low_complexity Low_complexity 3 40 0 9 1346 881 162 28 0 chr15 99782530 99782672 -3712302 - B1_Mur4 SINE Alu 0 150 5 9 1346 312 27 0 0 chr15 99782685 99782722 -3712252 + (T)n Simple_repeat Simple_repeat 1 37 0 9 1346 1239 47 0 0 chr15 99782722 99782870 -3712104 - B1_Mus1 SINE Alu 0 148 1 9 1346 329 244 16 101 chr15 99782892 99783017 -3711957 - B3 SINE B2 -6 192 85 9 1346 1270 34 0 0 chr15 99783150 99783297 -3711677 + B1_Mus2 SINE Alu 1 147 0 9 1346 1391 75 37 0 chr15 99783319 99783506 -3711468 + B2_Mm2 SINE B2 1 194 -1 9 1346 279 356 10 0 chr15 99783659 99783763 -3711211 + ID_B1 SINE B4 72 176 -48 9 1346 503 255 0 0 chr15 99783679 99783785 -3711189 + PB1D10 SINE Alu 12 117 0 9 1346 367 289 63 54 chr15 99783950 99784195 -3710779 + RMER20B LTR ERVK 176 417 -225 9 1346 377 78 0 0 chr15 99784637 99784688 -3710286 + B1_Mur4 SINE Alu 90 140 -10 9 1346 1087 194 9 19 chr15 99784907 99785117 -3709857 - B3 SINE B2 -8 208 1 9 1346 313 142 13 51 chr15 99785506 99785574 -3709400 + B2_Mm2 SINE B2 46 116 -82 9 1346 222 175 0 0 chr15 99786199 99786239 -3708735 + RSINE1 SINE B4 8 47 -118 9 1346 236 281 43 53 chr15 99786681 99786775 -3708199 + PB1D10 SINE Alu 17 109 -40 9 1346 459 244 109 0 chr15 99786853 99786972 -3708002 + ID_B1 SINE B4 86 217 -7 9 1346 530 219 9 0 chr15 99787251 99787365 -3707609 + ID_B1 SINE B4 98 212 -12 9 1346 180 0 0 0 chr15 99787366 99787386 -3707588 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 9 1346 462 344 7 13 chr15 99787486 99787639 -3707335 + RSINE1 SINE B4 5 156 -9 9 1346 237 98 0 0 chr15 99787651 99787692 -3707282 + (GA)n Simple_repeat Simple_repeat 2 42 0 9 1346 544 340 69 55 chr15 99787819 99788167 -3706807 - MTD LTR MaLR -8 411 59 9 1346 1311 199 80 26 chr15 99788082 99788433 -3706541 + MTD LTR MaLR 44 413 -6 9 1346 932 49 106 0 chr15 99788433 99788556 -3706418 + B1_Mus2 SINE Alu 1 136 -11 9 1346 743 88 9 0 chr15 99788561 99788674 -3706300 + (GAAAA)n Simple_repeat Simple_repeat 2 115 0 9 1346 695 133 298 35 chr15 99788677 99788848 -3706126 + B3 SINE B2 1 216 0 9 1346 599 254 0 60 chr15 99789157 99789308 -3705666 + ID_B1 SINE B4 79 220 -4 9 1346 615 191 9 9 chr15 99789326 99789442 -3705532 - PB1D9 SINE Alu 0 120 5 9 1346 361 254 106 50 chr15 99789532 99789673 -3705301 + B4A SINE B4 74 222 -70 9 1346 243 250 0 0 chr15 99789675 99789743 -3705231 + (TG)n Simple_repeat Simple_repeat 2 69 0 9 1346 1123 62 7 0 chr15 99789961 99790105 -3704869 + B1_Mm SINE Alu 3 147 0 9 1346 183 80 0 0 chr15 99790105 99790130 -3704844 + (GAAAA)n Simple_repeat Simple_repeat 3 27 0 9 1346 522 213 35 42 chr15 99790130 99790272 -3704702 - MT2B LTR ERVL -70 531 391 9 1346 900 152 7 7 chr15 99790281 99790427 -3704547 + B1_Mur4 SINE Alu 5 150 0 9 1346 288 0 0 0 chr15 99790451 99790483 -3704491 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 9 1346 484 152 0 0 chr15 99790485 99790564 -3704410 - MT2B LTR ERVL -454 79 1 9 1346 770 269 11 11 chr15 99790564 99790752 -3704222 + ID_B1 SINE B4 37 224 0 9 1346 678 245 21 0 chr15 99790776 99790919 -3704055 + B1_Mur1 SINE Alu 1 146 -3 9 1346 590 269 23 0 chr15 99790951 99791081 -3703893 + B1F SINE Alu 9 141 -8 9 1346 230 191 15 73 chr15 99791123 99791136 -3703838 + B4 SINE B4 77 140 -152 9 1346 287 200 0 0 chr15 99791136 99791191 -3703783 + B1_Mur4 SINE Alu 2 56 -94 9 1346 1162 55 0 0 chr15 99791244 99791390 -3703584 + B1_Mus2 SINE Alu 2 147 0 9 1346 1383 175 77 3 chr15 99791414 99791700 -3703274 - MTC LTR MaLR -105 316 10 9 1346 640 198 0 0 chr15 99792243 99792354 -3702620 - PB1D9 SINE Alu -7 113 3 9 1346 714 251 42 28 chr15 99792488 99792701 -3702273 + B3 SINE B2 1 216 0 9 1346 1210 55 0 0 chr15 99792707 99792852 -3702122 + B1_Mus2 SINE Alu 2 146 -1 9 1346 1108 59 0 0 chr15 99792944 99793079 -3701895 - B1_Mus1 SINE Alu -13 135 1 9 1346 604 189 97 16 chr15 99793517 99793641 -3701333 + B1_Mm SINE Alu 2 135 -12 9 1346 954 55 87 0 chr15 99793641 99793768 -3701206 + B1_Mus1 SINE Alu 1 138 -10 9 1346 356 0 0 22 chr15 99793768 99793813 -3701161 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 9 1346 701 219 216 32 chr15 99793816 99793938 -3701036 + ORR1D1 LTR MaLR 77 203 -171 9 1346 962 107 189 0 chr15 99793938 99794097 -3700877 + B2_Mm2 SINE B2 2 190 -5 9 1346 701 219 216 32 chr15 99794097 99794224 -3700750 + ORR1D1 LTR MaLR 204 372 -2 9 1346 4822 197 50 128 chr15 99794247 99794577 -3700397 + ORR1D1-int LTR MaLR 34 385 -985 9 1346 960 221 117 64 chr15 99794577 99794997 -3699977 + RMER10A LTR ERVL 1 442 0 9 1346 4822 197 50 128 chr15 99794997 99796115 -3698859 + ORR1D1-int LTR MaLR 386 1369 -1 9 1346 460 209 304 37 chr15 99796116 99796370 -3698604 + ORR1D1 LTR MaLR 1 374 0 9 1346 325 295 39 45 chr15 99796584 99796740 -3698234 - RSINE1 SINE B4 0 165 11 9 1346 500 0 17 0 chr15 99796756 99796816 -3698158 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 9 1346 259 286 0 135 chr15 99796829 99796937 -3698037 - B1F2 SINE Alu -52 97 3 9 1346 269 297 0 59 chr15 99796874 99796942 -3698032 - ID_B1 SINE B4 -82 142 79 9 1346 253 234 16 0 chr15 99798479 99798543 -3696431 - ID4_ SINE ID -18 65 1 9 1346 327 25 0 0 chr15 99798635 99798675 -3696299 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 9 1346 1187 57 0 0 chr15 99798677 99798817 -3696157 - B1_Mus2 SINE Alu -6 141 2 9 1346 342 0 0 0 chr15 99798865 99798903 -3696071 + (TG)n Simple_repeat Simple_repeat 1 38 0 9 1346 450 238 79 0 chr15 99798904 99799005 -3695969 - RSINE1 SINE B4 -53 112 4 9 1346 322 312 28 0 chr15 99799152 99799261 -3695713 + PB1D7 SINE Alu 1 112 -8 9 1346 844 56 175 0 chr15 99799269 99799395 -3695579 - B1_Mus1 SINE Alu 0 148 1 9 1346 54 0 0 15 chr15 99799831 99799871 -3695103 + AT_rich Low_complexity Low_complexity 1 40 0 9 1346 1187 35 7 0 chr15 99799871 99800015 -3694959 + B1_Mus2 SINE Alu 2 146 -1 9 1346 54 0 0 15 chr15 99800015 99800039 -3694935 + AT_rich Low_complexity Low_complexity 1 24 0 9 1346 500 123 0 0 chr15 99800047 99800120 -3694854 - B1_Mus1 SINE Alu -75 73 1 9 1346 249 57 0 0 chr15 99800203 99800238 -3694736 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 9 1346 843 82 0 47 chr15 99800239 99800367 -3694607 - B1_Mm SINE Alu -12 135 14 9 1346 236 254 0 16 chr15 99800350 99800414 -3694560 - MT2C_Mm LTR ERVL -240 235 173 9 1346 698 55 0 0 chr15 99800375 99800466 -3694508 - B1_Mus1 SINE Alu -57 91 1 9 1346 3764 134 111 13 chr15 99800747 99801435 -3693539 - RMER6A LTR ERVK 0 756 2 9 1346 353 116 0 7 chr15 99801473 99801541 -3693433 + PB1D9 SINE Alu 2 67 -50 9 1346 712 206 8 0 chr15 99801595 99801726 -3693248 + B1_Mus2 SINE Alu 2 133 -14 9 1346 297 229 0 79 chr15 99801802 99801878 -3693096 + B3 SINE B2 2 71 -145 9 1346 872 114 38 8 chr15 99801963 99802001 -3692973 + B1_Mus2 SINE Alu 2 39 -108 9 1346 198 0 0 0 chr15 99802001 99802023 -3692951 + (TGGGGG)n Simple_repeat Simple_repeat 5 26 0 9 1346 872 114 38 8 chr15 99802023 99802117 -3692857 + B1_Mus2 SINE Alu 40 136 -11 9 1346 198 71 0 0 chr15 99802123 99802151 -3692823 + (A)n Simple_repeat Simple_repeat 1 28 0 9 1346 642 138 43 8 chr15 99802194 99802311 -3692663 + B1_Mur4 SINE Alu 30 150 0 9 1346 28 36 0 35 chr15 99802325 99802352 -3692622 + AT_rich Low_complexity Low_complexity 1 27 0 9 1346 1162 68 0 7 chr15 99802352 99802500 -3692474 - B1_Mus2 SINE Alu 0 147 1 9 1346 28 36 0 35 chr15 99802500 99802529 -3692445 + AT_rich Low_complexity Low_complexity 1 28 0 9 1346 21 57 0 0 chr15 99802578 99802613 -3692361 + AT_rich Low_complexity Low_complexity 1 35 0 9 1346 229 224 26 26 chr15 99803715 99803793 -3691181 + (CGGG)n Simple_repeat Simple_repeat 3 80 0 9 1346 624 155 8 8 chr15 99805040 99805157 -3689817 - B1_Mus2 SINE Alu -12 135 19 9 1346 725 159 76 0 chr15 99805365 99805497 -3689477 + B1_Mus1 SINE Alu 5 146 -2 9 1346 713 31 10 10 chr15 99805611 99805710 -3689264 - B1_Mm SINE Alu 0 147 49 9 1346 513 96 0 0 chr15 99805709 99805782 -3689192 - B2_Mm2 SINE B2 -121 74 2 9 1346 249 254 0 17 chr15 99805917 99805977 -3688997 - RSINE1 SINE B4 -90 75 17 9 1346 280 192 24 71 chr15 99806001 99806085 -3688889 - L1MB3 LINE L1 -77 6106 6027 9 1346 458 251 127 4 chr15 99806091 99806237 -3688737 + B3A SINE B2 22 181 -14 9 1346 375 178 61 13 chr15 99806379 99806485 -3688489 + B1_Mur2 SINE Alu 9 149 0 9 1346 336 91 0 0 chr15 99806509 99806528 -3688446 + (A)n Simple_repeat Simple_repeat 1 19 0 9 1346 1180 61 0 7 chr15 99806528 99806676 -3688298 + B1_Mm SINE Alu 1 147 0 9 1346 336 91 0 0 chr15 99806676 99806711 -3688263 + (A)n Simple_repeat Simple_repeat 1 35 0 9 1346 648 292 58 0 chr15 99806814 99806985 -3687989 - B4A SINE B4 0 292 112 9 1346 242 312 0 119 chr15 99807015 99807124 -3687850 - RSINE1 SINE B4 0 165 70 9 1346 493 231 8 83 chr15 99807163 99807295 -3687679 - B1_Mur1 SINE Alu -21 128 7 9 1346 452 168 198 0 chr15 99807332 99807433 -3687541 - B1_Mus2 SINE Alu 0 147 27 9 1346 349 284 249 0 chr15 99807739 99807900 -3687074 + B3 SINE B2 10 210 -6 9 1346 1666 42 0 0 chr15 99808366 99808559 -3686415 + B2_Mm1a SINE B2 1 193 0 9 1346 299 210 77 39 chr15 99808837 99808941 -3686033 - ID_B1 SINE B4 -9 215 108 1 1346 216 284 104 0 chr15 99809119 99809186 -3685788 + ID SINE ID 4 77 -147 1 1346 252 209 31 2 chr15 99809330 99809401 -3685573 + B1_Mus1 SINE Alu 4 76 -72 1 1346 259 200 49 16 chr15 99809434 99809495 -3685479 + PB1 SINE Alu 63 125 -2 1 1346 221 273 30 0 chr15 99809536 99809619 -3685355 + MIR SINE MIR 79 157 -105 1 1346 268 179 188 12 chr15 99809797 99809882 -3685092 + B2_Mm2 SINE B2 3 102 -93 1 1346 244 300 25 12 chr15 99810340 99810421 -3684553 + MIR SINE MIR 12 93 -169 1 1346 352 303 9 9 chr15 99810547 99810657 -3684317 - B1F SINE Alu -39 110 1 1 1346 997 72 65 0 chr15 99810732 99810870 -3684104 - B1_Mm SINE Alu 0 147 1 1 1346 961 107 47 0 chr15 99811019 99811168 -3683806 - B2_Mm2 SINE B2 -38 157 2 1 1346 1163 112 21 0 chr15 99811174 99811198 -3683776 - B2_Mm2 SINE B2 -3 192 168 1 1346 180 0 0 0 chr15 99811198 99811218 -3683756 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1 1346 1163 112 21 0 chr15 99811218 99811380 -3683594 - B2_Mm2 SINE B2 -28 167 3 1 1346 585 232 43 0 chr15 99811418 99811556 -3683418 - ID_B1 SINE B4 -1 223 80 1 1346 1026 65 58 0 chr15 99811586 99811725 -3683249 - B1_Mus2 SINE Alu 0 147 1 1 1346 260 252 74 46 chr15 99812137 99812245 -3682729 - L1MD2 LINE L1 -76 6283 6173 1 1346 637 249 67 46 chr15 99812519 99812713 -3682261 + B3A SINE B2 1 198 0 1 1346 527 235 35 0 chr15 99812836 99812951 -3682023 - B1_Mur1 SINE Alu -30 119 1 1 1346 237 268 62 125 chr15 99812951 99812980 -3681994 - MT2B LTR ERVL -444 157 137 1 1346 444 241 101 9 chr15 99813033 99813142 -3681832 - PB1D9 SINE Alu -1 119 1 1 1346 371 293 24 16 chr15 99813169 99813294 -3681680 - ID_B1 SINE B4 -19 205 80 1 1346 567 195 0 0 chr15 99813295 99813413 -3681561 + (CATA)n Simple_repeat Simple_repeat 3 120 0 1 1346 617 189 30 45 chr15 99813420 99813553 -3681421 + B1_Mur1 SINE Alu 2 132 -17 1 1346 33 25 0 0 chr15 99813560 99813600 -3681374 + AT_rich Low_complexity Low_complexity 1 40 0 1 1346 482 296 46 7 chr15 99814275 99814341 -3680633 - RSINE1 SINE B4 -5 160 92 1 1346 459 195 194 47 chr15 99814341 99814470 -3680504 - B1_Mur4 SINE Alu -1 149 2 1 1346 482 296 46 7 chr15 99814470 99814556 -3680418 - RSINE1 SINE B4 -74 91 2 1 1346 270 269 0 29 chr15 99814634 99814703 -3680271 + RSINE1 SINE B4 27 93 -72 1 1346 369 0 0 0 chr15 99814733 99814774 -3680200 + (CATA)n Simple_repeat Simple_repeat 2 42 0 1 1346 346 278 78 0 chr15 99814783 99814873 -3680101 - ID_B1 SINE B4 -38 186 90 1 1346 445 226 66 0 chr15 99814898 99815004 -3679970 + PB1D9 SINE Alu 2 114 -6 1 1346 246 281 0 34 chr15 99815139 99815198 -3679776 + B4 SINE B4 87 143 -149 1 1346 226 200 49 24 chr15 99815579 99815661 -3679313 - MTEb LTR MaLR -2 377 294 1 1346 929 49 0 0 chr15 99816849 99816972 -3678002 + B1_Mus2 SINE Alu 25 147 0 1 1346 208 0 62 0 chr15 99816972 99817004 -3677970 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 1 1346 508 82 47 0 chr15 99817098 99817183 -3677791 + (TATG)n Simple_repeat Simple_repeat 2 90 0 1 1346 29 22 0 21 chr15 99817183 99817200 -3677774 + AT_rich Low_complexity Low_complexity 1 17 0 1 1346 816 70 131 58 chr15 99817200 99817337 -3677637 - B1_Mm SINE Alu 0 147 1 1 1346 29 22 0 21 chr15 99817337 99817366 -3677608 + AT_rich Low_complexity Low_complexity 1 29 0 1 1346 189 0 0 0 chr15 99817483 99817504 -3677470 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1346 589 183 16 8 chr15 99818298 99818419 -3676555 + B1_Mm SINE Alu 26 147 0 1 1346 426 243 19 0 chr15 99818574 99818681 -3676293 - PB1D9 SINE Alu 0 120 12 1 1346 499 231 19 0 chr15 99818830 99818934 -3676040 - RMER1C Other Other -149 1193 1088 1 1346 247 349 18 70 chr15 99818937 99819051 -3675923 - PB1D10 SINE Alu -7 110 3 1 1346 1305 92 22 0 chr15 99819814 99819999 -3674975 - B2_Mm1t SINE B2 -3 190 2 1 1346 664 273 76 20 chr15 99820066 99820264 -3674710 - B3 SINE B2 -4 212 4 1 1346 998 47 0 0 chr15 99820410 99820537 -3674437 + B1_Mus1 SINE Alu 9 135 -13 1 1346 240 59 0 0 chr15 99820537 99820571 -3674403 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 1 1346 411 237 21 0 chr15 99821252 99821349 -3673625 - PB1D9 SINE Alu -21 99 1 1 1346 191 61 0 29 chr15 99821402 99821436 -3673538 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1 1346 555 209 75 37 chr15 99821588 99821722 -3673252 + B1_Mur3 SINE Alu 1 139 -10 1 1346 271 224 73 15 chr15 99821728 99821796 -3673178 - B3 SINE B2 -13 203 132 1 1346 21 0 0 0 chr15 99822131 99822152 -3672822 + AT_rich Low_complexity Low_complexity 1 21 0 1 1346 210 37 0 0 chr15 99823190 99823217 -3671757 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 1346 1342 78 39 11 chr15 99823217 99823391 -3671583 - B2_Mm2 SINE B2 -15 180 1 1 1346 435 313 22 40 chr15 99823933 99824159 -3670815 + ID_B1 SINE B4 3 224 0 1 1346 282 293 40 0 chr15 99824172 99824271 -3670703 + PB1D10 SINE Alu 9 111 -6 1 1346 282 269 66 125 chr15 99824508 99824644 -3670330 - B1F SINE Alu 0 149 22 1 1346 21 36 0 0 chr15 99825224 99825252 -3669722 + AT_rich Low_complexity Low_complexity 1 28 0 1 1346 383 290 28 0 chr15 99825714 99825821 -3669153 + B1F SINE Alu 6 115 -34 1 1346 354 23 0 0 chr15 99826120 99826163 -3668811 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1346 227 278 87 22 chr15 99826600 99826692 -3668282 - L1M2 LINE L1 -401 5899 5802 1 1346 279 0 0 0 chr15 99827449 99827480 -3667494 + (ATTG)n Simple_repeat Simple_repeat 4 34 0 1 1346 599 90 89 10 chr15 99827483 99827584 -3667390 - B1_Mur2 SINE Alu -17 132 24 1 1346 1395 70 48 0 chr15 99828003 99828189 -3666785 - B2_Mm2 SINE B2 0 195 1 1 1346 23 0 0 0 chr15 99828189 99828212 -3666762 + AT_rich Low_complexity Low_complexity 1 23 0 1 1346 685 226 99 5 chr15 99828315 99828343 -3666631 - B3 SINE B2 -7 209 182 1 1346 387 0 0 0 chr15 99828343 99828386 -3666588 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1346 342 115 0 0 chr15 99828386 99828437 -3666537 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1346 685 226 99 5 chr15 99828437 99828598 -3666376 - B3 SINE B2 -35 181 2 1 1346 294 309 25 0 chr15 99828605 99828686 -3666288 - B4 SINE B4 -206 86 4 1 1346 1701 21 5 0 chr15 99829007 99829199 -3665775 - B2_Mm1t SINE B2 0 193 1 1 1346 496 224 90 0 chr15 99829204 99829338 -3665636 - B1_Mus1 SINE Alu -1 147 2 1 1346 225 209 0 23 chr15 99829770 99829814 -3665160 - PB1D9 SINE Alu -68 52 10 1 1346 1091 92 7 0 chr15 99830374 99830516 -3664458 - B1_Mus1 SINE Alu -5 143 1 1 1346 570 197 91 0 chr15 99830551 99830683 -3664291 - B1_Mus1 SINE Alu 0 148 5 1 1346 239 293 50 41 chr15 99830585 99830706 -3664268 - MT2B LTR ERVL -337 264 143 1 1346 330 226 34 0 chr15 99830954 99831035 -3663939 - B1_Mur4 SINE Alu -11 138 52 1 1346 326 59 0 38 chr15 99831165 99831218 -3663756 + L1_Mus2 LINE L1 6516 6566 0 1 1346 226 226 38 0 chr15 99831518 99831571 -3663403 + B1_Mur3 SINE Alu 55 109 -40 1 1346 369 202 56 32 chr15 99831819 99831926 -3663048 - B1_Mur1 SINE Alu -31 118 6 1 1346 295 214 169 0 chr15 99832519 99832608 -3662366 + PB1D9 SINE Alu 12 115 -5 1 1346 543 284 43 0 chr15 99832929 99833091 -3661883 + B3 SINE B2 31 199 -17 1 1346 549 311 161 13 chr15 99833415 99833570 -3661404 - MT2A LTR ERVL -77 456 267 1 1346 927 74 80 15 chr15 99833570 99833707 -3661267 + B1_Mus1 SINE Alu 3 148 0 1 1346 549 311 161 13 chr15 99833707 99833861 -3661113 - MT2A LTR ERVL -267 266 101 1 1346 531 231 107 0 chr15 99833945 99834066 -3660908 + B1_Mur1 SINE Alu 1 134 -15 1 1346 637 293 32 60 chr15 99834097 99834315 -3660659 + B3 SINE B2 3 214 -2 1 1346 21 57 0 0 chr15 99835914 99835949 -3659025 + AT_rich Low_complexity Low_complexity 1 35 0 1 1346 218 283 74 32 chr15 99836157 99836252 -3658722 - PB1D10 SINE Alu -7 110 12 1 1346 443 243 36 9 chr15 99836385 99836497 -3658477 - RSINE1 SINE B4 -40 125 11 1 1346 608 255 34 68 chr15 99836825 99837002 -3657972 + B3A SINE B2 21 191 -7 1 1346 488 244 86 36 chr15 99837436 99837576 -3657398 - B3 SINE B2 -25 191 45 1 1346 404 198 33 10 chr15 99837606 99837734 -3657240 - B3 SINE B2 -1 197 58 1 1346 183 42 0 0 chr15 99838200 99838224 -3656750 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1346 1209 48 0 0 chr15 99838224 99838370 -3656604 - B1_Mus1 SINE Alu -2 146 1 1 1346 1434 84 5 10 chr15 99838401 99838594 -3656380 - B2_Mm1t SINE B2 0 193 2 1 1346 247 337 32 0 chr15 99838613 99838708 -3656266 + PB1D10 SINE Alu 10 107 -10 1 1346 589 282 57 11 chr15 99838730 99838906 -3656068 + B3A SINE B2 12 195 -3 1 1346 1006 90 95 73 chr15 99838909 99839088 -3655886 + B2_Mm2 SINE B2 2 184 -11 1 1346 383 239 95 19 chr15 99839112 99839270 -3655704 + B2_Mm2 SINE B2 2 171 -24 1 1346 871 158 13 27 chr15 99839360 99839510 -3655464 + B1_Mur2 SINE Alu 1 148 -1 1 1346 534 198 6 105 chr15 99840945 99841126 -3653848 + RMER10B LTR ERVL 188 350 -48 1 1346 329 336 26 0 chr15 99841231 99841347 -3653627 + B1F SINE Alu 19 137 -12 1 1346 982 63 35 0 chr15 99841396 99841538 -3653436 - B1_Mus2 SINE Alu 0 147 1 1 1346 288 120 0 0 chr15 99842804 99842854 -3652120 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 1346 214 315 61 35 chr15 99843712 99843827 -3651147 + PB1D9 SINE Alu 3 120 0 1 1346 24 0 0 0 chr15 99846137 99846161 -3648813 + AT_rich Low_complexity Low_complexity 1 24 0 1 1346 24 53 0 0 chr15 99846743 99846781 -3648193 + AT_rich Low_complexity Low_complexity 1 38 0 1 1346 577 213 112 37 chr15 99847093 99847254 -3647720 - B3 SINE B2 -41 175 3 1 1346 333 266 21 11 chr15 99847271 99847366 -3647608 + PB1D9 SINE Alu 18 113 -7 1 1346 381 240 57 8 chr15 99847873 99847995 -3646979 - B3A SINE B2 -50 148 21 1 1346 230 111 52 69 chr15 99848018 99848076 -3646898 - B1F SINE Alu -1 148 92 1 1346 354 249 207 11 chr15 99848031 99848210 -3646764 - ID_B1 SINE B4 -10 214 1 1 1346 588 141 21 16 chr15 99848229 99848342 -3646632 - B1_Mus2 SINE Alu -199 115 1 1 1346 252 77 0 0 chr15 99848352 99848391 -3646583 + (T)n Simple_repeat Simple_repeat 1 39 0 1 1346 1280 27 0 0 chr15 99848391 99848538 -3646436 - B1_Mm SINE Alu 0 147 1 1 1346 831 132 0 8 chr15 99848684 99848814 -3646160 + B2_Mm2 SINE B2 17 145 -50 1 1346 1494 240 52 92 chr15 99848959 99849492 -3645482 + RLTR18B LTR ERVK 1 512 0 1 1346 817 134 29 13 chr15 99851726 99851910 -3643064 - B2_Mm2 SINE B2 -9 184 1 1 1346 241 226 0 61 chr15 99851927 99851993 -3642981 + L1M2 LINE L1 4791 4852 -1291 1 1346 676 237 116 16 chr15 99851993 99852182 -3642792 - B3 SINE B2 -8 208 1 1 1346 1142 69 0 0 chr15 99852238 99852383 -3642591 + B1_Mm SINE Alu 3 147 0 1 1346 1085 69 0 40 chr15 99852383 99852534 -3642440 + B1_Mus2 SINE Alu 1 145 -2 1 1346 202 128 0 60 chr15 99852537 99852587 -3642387 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 1346 792 48 0 0 chr15 99852599 99852704 -3642270 + B1_Mm SINE Alu 43 147 0 1 1346 440 292 98 81 chr15 99852835 99853204 -3641770 + RLTR4_MM-int LTR ERV1 2115 2503 -5275 1 1346 983 317 45 31 chr15 99853369 99853929 -3641045 + RLTR4_MM-int LTR ERV1 3338 3975 -3803 1 1346 2773 42 45 0 chr15 99853985 99854316 -3640658 - ORR1A0 LTR MaLR 0 346 1 1 1346 242 329 78 84 chr15 99854356 99854535 -3640439 - MLT1J-int LTR MaLR -50 1337 1160 1 1346 275 368 0 17 chr15 99854633 99854749 -3640225 + PB1D10 SINE Alu 4 117 0 1 1346 186 189 0 0 chr15 99854750 99854787 -3640187 + GA-rich Low_complexity Low_complexity 3 39 0 1 1346 272 152 15 0 chr15 99854987 99855053 -3639921 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 1346 713 289 62 36 chr15 99855068 99855344 -3639630 - B4A SINE B4 -9 283 1 1 1346 281 268 82 0 chr15 99855369 99855466 -3639508 - MLT1H LTR MaLR -15 534 430 1 1346 239 290 89 83 chr15 99855574 99855743 -3639231 - MLT1H LTR MaLR -251 238 69 1 1346 222 355 26 61 chr15 99855799 99855913 -3639061 - PB1D10 SINE Alu -2 115 6 1 1346 399 336 114 9 chr15 99856039 99856258 -3638716 - MLT1J-int LTR MaLR -488 899 658 1 1346 734 102 24 18 chr15 99856326 99856496 -3638478 + (TG)n Simple_repeat Simple_repeat 2 172 0 1 1346 283 216 24 6 chr15 99856512 99856680 -3638294 + (TG)n Simple_repeat Simple_repeat 2 172 0 1 1346 281 288 14 14 chr15 99856729 99856803 -3638171 - ID4 SINE ID -6 77 4 1 1346 246 224 45 45 chr15 99856819 99856908 -3638066 + MER33 DNA MER1_type 236 324 0 1 1346 932 57 0 28 chr15 99856996 99857140 -3637834 + (TCCC)n Simple_repeat Simple_repeat 4 143 0 1 1346 293 250 0 14 chr15 99857145 99857214 -3637760 - ID4 SINE ID -3 80 13 1 1346 330 332 37 98 chr15 99857431 99857488 -3637486 + B4A SINE B4 46 186 -106 1 1346 776 193 0 0 chr15 99857488 99857623 -3637351 + B1_Mus2 SINE Alu 12 146 -1 1 1346 330 332 37 98 chr15 99857623 99857645 -3637329 + B4A SINE B4 187 246 -46 1 1346 609 169 26 0 chr15 99857645 99857799 -3637175 + GA-rich Low_complexity Low_complexity 3 160 0 1 1346 365 130 0 0 chr15 99857808 99857862 -3637112 + B3 SINE B2 3 56 -160 1 1346 246 355 30 0 chr15 99858180 99858349 -3636625 + (CAGTG)n Simple_repeat Simple_repeat 3 176 0 1 1346 277 323 32 0 chr15 99858356 99858584 -3636390 + (CAGTG)n Simple_repeat Simple_repeat 1 235 0 1 1346 1039 195 41 20 chr15 99858640 99858886 -3636088 + MTD LTR MaLR 3 253 -166 1 1346 2929 149 48 36 chr15 99858986 99859509 -3635465 - RLTR24 LTR ERV1 0 529 1 1 1346 242 87 22 0 chr15 99859562 99859608 -3635366 + (TTTG)n Simple_repeat Simple_repeat 1 47 0 1 1346 717 77 239 0 chr15 99859608 99859725 -3635249 - B1_Mus1 SINE Alu 0 148 4 1 1346 422 288 40 40 chr15 99859838 99859990 -3634984 - RLTR19-int LTR ERVK -1758 4379 4228 1 1346 1031 279 46 86 chr15 99860137 99860639 -3634335 - RLTR19-int LTR ERVK -2028 4109 3628 1 1346 886 109 7 7 chr15 99860647 99860786 -3634188 + B1_Mur3 SINE Alu 11 149 0 1 1346 535 242 61 115 chr15 99860819 99861080 -3633894 - RLTR19-int LTR ERVK -2487 3650 3404 1 1346 34 24 0 0 chr15 99861100 99861141 -3633833 + AT_rich Low_complexity Low_complexity 1 41 0 1 1346 847 110 13 33 chr15 99861141 99861292 -3633682 - B1_Mur4 SINE Alu 0 150 3 1 1346 308 246 70 116 chr15 99861380 99861509 -3633465 - RLTR19-int LTR ERVK -3114 3023 2901 1 1346 1054 254 131 44 chr15 99861596 99862094 -3632880 - RLTR19-int LTR ERVK -3254 2883 2343 1 1346 296 221 0 49 chr15 99862083 99862164 -3632810 - RLTR19-int LTR ERVK -3408 2114 2038 1 1346 410 168 5 171 chr15 99862195 99862417 -3632557 - RMER17C LTR ERVK -135 275 91 1 1346 666 188 31 119 chr15 99862425 99862471 -3632503 - RLTR19-int LTR ERVK -3471 2051 2024 1 1346 1070 103 7 0 chr15 99862471 99862617 -3632357 - B1_Mus2 SINE Alu 0 147 1 1 1346 666 188 31 119 chr15 99862617 99862763 -3632211 - RLTR19-int LTR ERVK -3499 2023 1876 1 1346 213 39 0 0 chr15 99862819 99862845 -3632129 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1346 1166 82 0 0 chr15 99862845 99862992 -3631982 - B1_Mus1 SINE Alu 0 148 2 1 1346 618 130 10 0 chr15 99863021 99863121 -3631853 - RLTR14 LTR ERV1 -111 271 171 1 1346 2127 206 44 75 chr15 99863319 99863865 -3631109 - RLTR24 LTR ERV1 0 529 1 1 1346 550 230 44 0 chr15 99863868 99863981 -3630993 - B3 SINE B2 -98 118 1 1 1346 349 324 27 53 chr15 99863982 99864055 -3630919 - B1F1 SINE Alu -2 147 81 1 1346 3551 20 2 0 chr15 99864055 99864450 -3630524 + MTA_Mm LTR MaLR 1 396 0 1 1346 349 324 27 53 chr15 99864450 99864526 -3630448 - B1F1 SINE Alu -69 80 2 1 1346 957 122 141 0 chr15 99864563 99864719 -3630255 + B2_Mm1t SINE B2 2 179 -14 1 1346 317 99 349 9 chr15 99864770 99864879 -3630095 + B2_Mm2 SINE B2 47 192 -3 1 1346 674 203 82 6 chr15 99864884 99865043 -3629931 + RMER6C LTR ERVK 1 171 -519 1 1346 469 157 0 12 chr15 99865007 99865091 -3629883 + MT2B LTR ERVL 177 259 -342 1 1346 289 315 230 24 chr15 99865320 99865597 -3629377 - MLT1G LTR MaLR -2 589 220 1 1346 360 0 0 0 chr15 99865597 99865637 -3629337 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1346 289 315 230 24 chr15 99865637 99865785 -3629189 - MLT1G LTR MaLR -372 219 76 1 1346 299 242 0 0 chr15 99865779 99865845 -3629129 - B1F1 SINE Alu -44 105 40 1 1346 263 316 161 43 chr15 99865906 99866068 -3628906 - B3A SINE B2 0 198 18 1 1346 449 107 45 45 chr15 99866068 99866156 -3628818 - B2_Mm2 SINE B2 -9 186 99 1 1346 584 242 136 17 chr15 99866179 99866375 -3628599 - B3 SINE B2 -10 206 14 1 1346 1688 26 0 0 chr15 99866392 99866583 -3628391 - B2_Mm1a SINE B2 -1 192 2 1 1346 34 0 0 0 chr15 99866608 99866642 -3628332 + AT_rich Low_complexity Low_complexity 1 34 0 1 1346 514 246 116 27 chr15 99866643 99866789 -3628185 - RSINE1 SINE B4 0 165 7 1 1346 1394 82 16 0 chr15 99866848 99867031 -3627943 - B2_Mm2 SINE B2 -9 186 1 1 1346 198 0 0 0 chr15 99867147 99867169 -3627805 + (TC)n Simple_repeat Simple_repeat 1 22 0 1 1346 207 69 0 0 chr15 99867169 99867197 -3627777 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1346 203 161 0 0 chr15 99867370 99867401 -3627573 + polypyrimidine Low_complexity Low_complexity 3 33 0 1 1346 277 278 42 0 chr15 99867410 99867482 -3627492 - B1_Mur1 SINE Alu -9 140 66 1 1346 332 261 113 35 chr15 99867933 99868048 -3626926 + B1_Mur1 SINE Alu 13 136 -13 1 1346 1035 152 0 0 chr15 99868052 99868230 -3626744 + CT-rich Low_complexity Low_complexity 3 180 0 1 1346 320 295 49 98 chr15 99868243 99868260 -3626714 - B4 SINE B4 -60 232 191 1 1346 752 163 15 8 chr15 99868260 99868390 -3626584 - B1_Mur1 SINE Alu -13 136 6 1 1346 320 295 49 98 chr15 99868390 99868446 -3626528 - B4 SINE B4 -60 190 40 1 1346 263 338 0 0 chr15 99868457 99868531 -3626443 - B3 SINE B2 -142 74 1 1 1346 608 115 78 26 chr15 99868602 99868718 -3626256 - ID_B1 SINE B4 0 224 103 1 1346 276 77 0 0 chr15 99869096 99869135 -3625839 + (CGG)n Simple_repeat Simple_repeat 2 40 0 1 1346 187 133 22 22 chr15 99869338 99869384 -3625590 + (CGGG)n Simple_repeat Simple_repeat 2 47 0 1 1346 420 109 0 0 chr15 99873067 99873122 -3621852 - L1_Mur1 LINE L1 -337 5549 5495 1 1346 25 31 0 0 chr15 99873135 99873167 -3621807 + AT_rich Low_complexity Low_complexity 1 32 0 1 1346 333 257 121 34 chr15 99873179 99873328 -3621646 - RSINE1 SINE B4 0 165 4 1 1346 24 32 0 0 chr15 99873332 99873363 -3621611 + AT_rich Low_complexity Low_complexity 1 31 0 1 1346 229 213 62 47 chr15 99873363 99873427 -3621547 - ID4_ SINE ID 0 83 19 1 1346 428 230 79 10 chr15 99873578 99873679 -3621295 - B1F2 SINE Alu -41 108 1 1 1346 801 210 0 0 chr15 99873707 99873845 -3621129 - B1_Mur3 SINE Alu -8 141 4 1 1346 33 0 0 0 chr15 99874061 99874094 -3620880 + AT_rich Low_complexity Low_complexity 1 33 0 1 1346 480 193 48 95 chr15 99874108 99874234 -3620740 - PB1D9 SINE Alu 0 120 1 1 1346 646 213 136 17 chr15 99874266 99874443 -3620531 - B3 SINE B2 -14 202 5 1 1346 235 315 58 65 chr15 99874453 99874474 -3620500 - B4 SINE B4 -72 220 139 1 1346 521 189 9 0 chr15 99874474 99874580 -3620394 - PB1D10 SINE Alu -2 115 9 1 1346 235 315 58 65 chr15 99874580 99874592 -3620382 - B4 SINE B4 -72 138 83 1 1346 725 224 51 6 chr15 99874583 99874758 -3620216 - B3 SINE B2 0 216 34 1 1346 1396 80 0 0 chr15 99874762 99874938 -3620036 + B2_Mm2 SINE B2 2 177 -18 1 1346 31 44 0 0 chr15 99874938 99874983 -3619991 + AT_rich Low_complexity Low_complexity 1 45 0 1 1346 654 184 7 62 chr15 99875000 99875145 -3619829 + B1_Mur4 SINE Alu 9 145 -5 1 1346 207 163 20 20 chr15 99875181 99875231 -3619743 + T-rich Low_complexity Low_complexity 1 50 0 1 1346 752 193 28 0 chr15 99875231 99875376 -3619598 - B1_Mur1 SINE Alu 0 149 1 1 1346 548 224 45 96 chr15 99875376 99875574 -3619400 - B3A SINE B2 -2 196 9 1 1346 253 276 0 26 chr15 99875719 99875797 -3619177 + MIRb SINE MIR 45 120 -148 1 1347 737 279 58 87 chr15 99877157 99877538 -3617436 + MTEa LTR MaLR 3 372 -7 1 1347 622 325 93 25 chr15 99877561 99877883 -3617091 - MLT1A0 LTR MaLR -21 344 1 1 1347 342 0 0 0 chr15 99878022 99878060 -3616914 + (TTCC)n Simple_repeat Simple_repeat 2 39 0 1 1347 471 141 0 0 chr15 99878060 99878138 -3616836 + (TC)n Simple_repeat Simple_repeat 2 79 0 1 1347 959 62 0 0 chr15 99878138 99878267 -3616707 - B1_Mus2 SINE Alu 0 147 19 1 1347 22 0 0 0 chr15 99878783 99878805 -3616169 + AT_rich Low_complexity Low_complexity 1 22 0 1 1347 1352 150 14 0 chr15 99878807 99879014 -3615960 - B3 SINE B2 -6 210 1 1 1347 512 176 0 0 chr15 99879044 99879129 -3615845 - B1_Mm SINE Alu -43 104 20 1 1347 1525 68 5 0 chr15 99880519 99880710 -3614264 + B2_Mm1a SINE B2 2 193 0 1 1347 1109 58 36 0 chr15 99880859 99880998 -3613976 - B1_Mus1 SINE Alu 0 148 5 1 1347 854 150 29 0 chr15 99882347 99882487 -3612487 + B1_Mur4 SINE Alu 1 144 -6 1 1347 192 77 0 0 chr15 99882503 99882529 -3612445 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 1 1347 233 143 24 0 chr15 99882567 99882609 -3612365 + B3 SINE B2 2 44 -172 1 1347 240 236 111 0 chr15 99882624 99882696 -3612278 + PB1 SINE Alu 23 102 -25 1 1347 266 0 0 29 chr15 99882707 99882742 -3612232 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1347 546 214 68 0 chr15 99882750 99882867 -3612107 - B1_Mur1 SINE Alu -13 136 12 1 1347 225 0 0 0 chr15 99883861 99883886 -3611088 + (GAA)n Simple_repeat Simple_repeat 1 25 0 1 1347 476 215 149 99 chr15 99884165 99884346 -3610628 - B3A SINE B2 -2 196 7 1 1347 192 152 0 0 chr15 99884841 99884874 -3610100 + T-rich Low_complexity Low_complexity 1 33 0 1 1347 1036 75 0 110 chr15 99884874 99884974 -3610000 - B1_Mm SINE Alu 0 147 65 1 1347 1525 43 27 0 chr15 99884974 99885161 -3609813 + B2_Mm1t SINE B2 2 193 0 1 1347 1036 75 0 110 chr15 99885161 99885224 -3609750 - B1_Mm SINE Alu -83 64 2 1 1347 22 0 0 0 chr15 99885227 99885249 -3609725 + AT_rich Low_complexity Low_complexity 1 22 0 1 1347 528 168 21 0 chr15 99885290 99885385 -3609589 + B1_Mur1 SINE Alu 33 129 -20 1 1347 917 171 193 0 chr15 99885490 99885666 -3609308 + B3 SINE B2 1 210 -6 1 1347 653 144 58 43 chr15 99885727 99885865 -3609109 - B1_Mus1 SINE Alu -8 140 1 1 1347 693 204 124 55 chr15 99885894 99886096 -3608878 - B3 SINE B2 0 216 1 1 1347 259 239 15 15 chr15 99886103 99886171 -3608803 - PB1D10 SINE Alu -49 68 1 1 1347 853 144 0 0 chr15 99886270 99886409 -3608565 - B1_Mus2 SINE Alu 0 147 9 1 1347 236 253 171 13 chr15 99886470 99886546 -3608428 + ID SINE ID 2 89 -135 1 1347 206 81 27 0 chr15 99886601 99886638 -3608336 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 1 1347 1121 89 6 0 chr15 99886715 99886872 -3608102 + B2_Mm1t SINE B2 2 159 -34 1 1347 280 218 140 35 chr15 99886872 99886986 -3607988 - B1F2 SINE Alu -17 132 7 1 1347 21 0 0 0 chr15 99887513 99887534 -3607440 + AT_rich Low_complexity Low_complexity 1 21 0 1 1347 487 157 147 0 chr15 99887578 99887680 -3607294 - B1_Mur2 SINE Alu -7 142 26 1 1347 1181 54 0 0 chr15 99887720 99887867 -3607107 - B1_Mus1 SINE Alu 0 148 2 1 1347 207 0 0 0 chr15 99887869 99887892 -3607082 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1347 253 29 0 0 chr15 99887892 99887926 -3607048 - B1_Mm SINE Alu -9 138 105 1 1347 343 235 75 47 chr15 99888460 99888567 -3606407 + PB1D10 SINE Alu 7 116 -1 1 1347 425 217 155 9 chr15 99888969 99889085 -3605889 + RSINE1 SINE B4 14 146 -19 1 1347 294 209 14 43 chr15 99889116 99889186 -3605788 + 4.5SRNA scRNA scRNA 19 86 -8 1 1347 828 57 0 0 chr15 99889138 99889244 -3605730 + B1_Mus2 SINE Alu 42 147 0 1 1347 34 0 0 0 chr15 99889986 99890020 -3604954 + AT_rich Low_complexity Low_complexity 1 34 0 1 1347 600 222 12 34 chr15 99890030 99890178 -3604796 - B1_Mus1 SINE Alu 0 148 1 1 1347 1696 55 8 52 chr15 99890689 99890938 -3604036 - L1_Mus3 LINE L1 -4 6634 6397 1 1347 257 156 39 13 chr15 99891760 99891838 -3603136 + (CAGTA)n Simple_repeat Simple_repeat 4 83 0 1 1347 341 171 5 102 chr15 99891851 99892047 -3602927 + (CAGTA)n Simple_repeat Simple_repeat 2 178 0 1 1347 479 214 36 0 chr15 99892277 99892389 -3602585 - B3A SINE B2 -81 117 2 1 1347 728 238 134 5 chr15 99892508 99892702 -3602272 + ID_B1 SINE B4 3 221 -3 1 1347 200 143 18 0 chr15 99893065 99893121 -3601853 + T-rich Low_complexity Low_complexity 5 61 0 1 1347 893 145 14 7 chr15 99893135 99893281 -3601693 - B1_Mur3 SINE Alu -2 147 1 1 1347 1222 29 0 0 chr15 99894060 99894199 -3600775 + B1_Mus2 SINE Alu 1 139 -8 1 1347 252 0 0 0 chr15 99894201 99894229 -3600745 + (CAAAA)n Simple_repeat Simple_repeat 5 32 0 1 1347 573 187 0 78 chr15 99894847 99894963 -3600011 - ID_B1 SINE B4 -40 184 78 1 1347 924 132 0 7 chr15 99894989 99895126 -3599848 + B1_Mur4 SINE Alu 13 148 -2 1 1347 273 232 155 28 chr15 99895396 99895467 -3599507 - PB1D10 SINE Alu -5 112 33 1 1347 754 235 63 6 chr15 99895532 99895718 -3599256 + B3 SINE B2 2 195 -3 1 1347 245 327 90 6 chr15 99895769 99895935 -3599039 - L1M4 LINE L1 -1115 5031 4852 1 1347 1060 116 22 39 chr15 99895941 99896120 -3598854 + B2_Mm2 SINE B2 1 176 -19 1 1347 436 272 42 42 chr15 99896147 99896266 -3598708 + RSINE1 SINE B4 47 165 0 1 1347 447 177 30 24 chr15 99896347 99896515 -3598459 + (CA)n Simple_repeat Simple_repeat 2 170 0 1 1347 266 310 0 0 chr15 99896901 99896972 -3598002 - ID4_ SINE ID -8 75 5 1 1347 1014 75 8 0 chr15 99896989 99897123 -3597851 - B2_Mm2 SINE B2 -31 164 30 1 1347 547 269 99 0 chr15 99897711 99897852 -3597122 + RSINE1 SINE B4 3 157 -8 1 1347 381 241 11 28 chr15 99898087 99898266 -3596708 + CT-rich Low_complexity Low_complexity 3 178 0 1 1347 208 143 18 18 chr15 99898462 99898519 -3596455 + (TTTG)n Simple_repeat Simple_repeat 2 58 0 1 1347 1259 34 0 7 chr15 99898523 99898670 -3596304 - B1_Mm SINE Alu 0 147 2 1 1347 838 164 0 33 chr15 99898673 99898824 -3596150 - B1_Mus2 SINE Alu -1 146 1 1 1347 317 278 38 85 chr15 99899042 99899148 -3595826 - PB1D10 SINE Alu -8 109 9 1 1347 412 296 18 9 chr15 99899209 99899318 -3595656 + PB1D10 SINE Alu 1 110 -7 1 1347 211 286 38 114 chr15 99899546 99899625 -3595349 - RSINE1 SINE B4 0 165 93 1 1347 638 220 157 6 chr15 99899621 99899799 -3595175 - B3 SINE B2 -1 215 11 1 1347 183 129 0 0 chr15 99899803 99899834 -3595140 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 1 1347 186 158 0 0 chr15 99899852 99899871 -3595103 + T-rich Low_complexity Low_complexity 20 38 0 1 1347 868 158 0 27 chr15 99899871 99900021 -3594953 - B1_Mus2 SINE Alu 0 147 2 1 1347 186 158 0 0 chr15 99900021 99900039 -3594935 + T-rich Low_complexity Low_complexity 2 19 0 1 1347 216 0 0 0 chr15 99900667 99900691 -3594283 + (CTGTG)n Simple_repeat Simple_repeat 3 26 0 1 1347 388 174 33 44 chr15 99901057 99901147 -3593827 - PB1D10 SINE Alu 0 117 29 1 1347 293 143 0 82 chr15 99901728 99901789 -3593185 - B3 SINE B2 -160 56 1 1 1347 216 143 0 0 chr15 99901827 99901869 -3593105 + (TCCA)n Simple_repeat Simple_repeat 4 45 0 1 1347 504 202 10 21 chr15 99901892 99901988 -3592986 + PB1D9 SINE Alu 21 115 -5 1 1347 359 262 36 0 chr15 99901995 99902079 -3592895 - PB1D10 SINE Alu -20 97 11 1 1347 253 323 43 0 chr15 99901997 99902090 -3592884 - ID_B1 SINE B4 -48 176 80 1 1347 390 293 202 36 chr15 99902091 99902339 -3592635 - L1M2 LINE L1 -1050 5093 4805 1 1347 39 50 0 0 chr15 99902636 99902696 -3592278 + AT_rich Low_complexity Low_complexity 1 60 0 1 1347 634 131 180 0 chr15 99902727 99902849 -3592125 + B1_Mus1 SINE Alu 5 148 0 1 1347 254 243 63 36 chr15 99903053 99903164 -3591810 - HAL1 LINE L1 -292 2215 2102 1 1347 764 160 34 14 chr15 99903322 99903468 -3591506 - B1_Mur4 SINE Alu -1 149 1 1 1347 223 302 0 0 chr15 99903936 99903999 -3590975 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 1347 264 59 0 0 chr15 99904026 99904060 -3590914 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1347 311 105 52 17 chr15 99904092 99904150 -3590824 + B1_Mur3 SINE Alu 80 139 -10 1 1347 359 191 15 0 chr15 99904146 99904214 -3590760 + B1_Mus2 SINE Alu 69 137 -10 1 1347 258 0 0 67 chr15 99904653 99904698 -3590276 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1347 180 0 0 0 chr15 99904857 99904877 -3590097 + (TTTCC)n Simple_repeat Simple_repeat 4 23 0 1 1347 543 31 0 0 chr15 99904877 99904942 -3590032 + (TCTCCC)n Simple_repeat Simple_repeat 2 66 0 1 1347 483 210 70 0 chr15 99904971 99905071 -3589903 - PB1D9 SINE Alu -13 107 1 1 1347 351 0 0 0 chr15 99905464 99905503 -3589471 + (CGGGGG)n Simple_repeat Simple_repeat 3 41 0 1 1347 186 43 0 0 chr15 99905616 99905639 -3589335 + (TCCCC)n Simple_repeat Simple_repeat 1 23 0 1 1347 617 198 30 67 chr15 99905729 99905864 -3589110 - B1F2 SINE Alu -14 135 6 1 1347 427 275 256 0 chr15 99905929 99906089 -3588885 - B3 SINE B2 -11 205 5 1 1347 577 280 25 6 chr15 99906438 99906596 -3588378 + B3A SINE B2 1 161 -37 1 1347 1008 224 55 5 chr15 99906638 99906840 -3588134 + B3 SINE B2 1 212 -4 1 1347 224 311 47 28 chr15 99906858 99906889 -3588085 - ID_B1 SINE B4 -115 109 2 1 1347 230 301 13 27 chr15 99906889 99906964 -3588010 - ID2 SINE ID -8 75 2 1 1347 180 0 0 0 chr15 99907631 99907651 -3587323 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 1347 231 36 0 0 chr15 99907651 99907678 -3587296 + (GA)n Simple_repeat Simple_repeat 1 28 0 1 1347 622 253 11 80 chr15 99907774 99907950 -3587024 + RSINE1 SINE B4 1 164 -1 1 1347 1152 94 43 37 chr15 99908655 99908842 -3586132 - B2_Mm2 SINE B2 -5 190 3 1 1347 195 114 0 0 chr15 99908884 99908919 -3586055 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 1 1347 291 281 16 0 chr15 99909207 99909271 -3585703 - RSINE1 SINE B4 -13 152 88 1 1347 283 309 64 0 chr15 99909435 99909451 -3585523 - B1F2 SINE Alu -41 108 9 1 1347 343 244 26 0 chr15 99909451 99909529 -3585445 - ID_B1 SINE B4 -55 169 90 1 1347 24 0 0 0 chr15 99909545 99909569 -3585405 + AT_rich Low_complexity Low_complexity 1 24 0 1 1347 1427 88 0 25 chr15 99910042 99910241 -3584733 - B2_Mm2 SINE B2 -1 194 1 1 1347 420 227 216 15 chr15 99910273 99910407 -3584567 + RSINE1 SINE B4 2 162 -3 1 1347 484 268 24 0 chr15 99910440 99910563 -3584411 - B1_Mur1 SINE Alu -20 129 4 1 1347 261 353 42 96 chr15 99910563 99910620 -3584354 - B4 SINE B4 -197 95 48 1 1347 582 211 0 121 chr15 99911182 99911306 -3583668 + B1_Mur3 SINE Alu 11 128 -21 1 1347 420 260 40 24 chr15 99911404 99911530 -3583444 + RSINE1 SINE B4 3 130 -35 1 1347 285 247 221 0 chr15 99914103 99914180 -3580794 - B1F SINE Alu -53 96 3 1 1347 379 242 61 0 chr15 99914184 99914283 -3580691 - PB1D10 SINE Alu -11 106 2 1 1347 1411 59 5 21 chr15 99914758 99914948 -3580026 - B2_Mm2 SINE B2 -7 188 2 1 1347 235 197 164 0 chr15 99915539 99915600 -3579374 - B1_Mur2 SINE Alu -18 131 61 1 1347 442 300 26 71 chr15 99915839 99915898 -3579076 - L1MD1 LINE L1 -192 6050 5990 1 1347 192 40 0 0 chr15 99915898 99915923 -3579051 + (CACAC)n Simple_repeat Simple_repeat 4 28 0 1 1347 442 300 26 71 chr15 99915923 99916089 -3578885 - L1MD1 LINE L1 -253 5989 5835 1 1347 525 259 155 48 chr15 99916365 99916674 -3578300 - Charlie1 DNA MER1_type -122 2659 2318 1 1347 566 113 0 10 chr15 99916728 99916826 -3578148 + (TCCC)n Simple_repeat Simple_repeat 2 98 0 1 1347 896 94 72 0 chr15 99916852 99916990 -3577984 - B1_Mur4 SINE Alu -1 149 2 1 1347 424 226 107 132 chr15 99917064 99917270 -3577704 - B3A SINE B2 -1 215 7 1 1347 541 262 0 18 chr15 99917285 99917394 -3577580 - B1_Mur1 SINE Alu 0 149 43 1 1347 231 279 29 0 chr15 99917394 99917462 -3577512 - Charlie1 DNA MER1_type -534 2247 2178 1 1347 250 182 15 15 chr15 99917465 99917532 -3577442 + CT-rich Low_complexity Low_complexity 1 67 0 1 1347 572 297 34 24 chr15 99917532 99917738 -3577236 - ID_B1 SINE B4 -15 209 13 1 1347 450 270 148 18 chr15 99917757 99917980 -3576994 + B4 SINE B4 9 280 -12 1 1347 282 295 152 65 chr15 99918021 99918159 -3576815 - Charlie1 DNA MER1_type -864 1917 1768 1 1347 398 194 0 0 chr15 99919242 99919309 -3575665 - PB1D9 SINE Alu -53 67 1 1 1347 1084 98 12 30 chr15 99919342 99919511 -3575463 + B2_Mm1t SINE B2 28 193 0 1 1347 27 52 0 17 chr15 99919519 99919544 -3575430 + AT_rich Low_complexity Low_complexity 1 25 0 1 1347 539 197 172 47 chr15 99919544 99919736 -3575238 + B3 SINE B2 1 216 0 1 1347 27 52 0 17 chr15 99919736 99919769 -3575205 + AT_rich Low_complexity Low_complexity 1 33 0 1 1347 328 272 22 101 chr15 99920854 99920993 -3573981 - L1MC5 LINE L1 -65 7896 7769 1 1347 541 246 138 40 chr15 99920994 99921050 -3573924 - B3A SINE B2 0 198 143 1 1347 618 109 0 0 chr15 99921050 99921142 -3573832 + (CA)n Simple_repeat Simple_repeat 1 92 0 1 1347 541 246 138 40 chr15 99921142 99921259 -3573715 - B3A SINE B2 -56 142 8 1 1347 1110 81 0 26 chr15 99921399 99921551 -3573423 + B1_Mus1 SINE Alu 1 148 0 1 1347 312 294 59 0 chr15 99921551 99921636 -3573338 + L1MEg LINE L1 1882 1971 -4113 1 1347 681 299 126 27 chr15 99921734 99921995 -3572979 + B4A SINE B4 5 291 -1 1 1347 180 111 0 0 chr15 99922998 99923025 -3571949 + (TGGG)n Simple_repeat Simple_repeat 3 29 0 1 1347 552 236 104 73 chr15 99923934 99924126 -3570848 - B3A SINE B2 0 198 1 1 1347 418 187 0 39 chr15 99924132 99924210 -3570764 - B1_Mur2 SINE Alu -5 144 70 1 1347 242 356 0 33 chr15 99924217 99924309 -3570665 - B1F2 SINE Alu -16 104 16 1 1347 301 283 150 0 chr15 99924302 99924415 -3570559 - B3A SINE B2 -19 179 50 1 1347 949 108 0 12 chr15 99924587 99924756 -3570218 + (TTCC)n Simple_repeat Simple_repeat 2 168 0 1 1347 1100 61 0 0 chr15 99924756 99924888 -3570086 - B1_Mus2 SINE Alu -14 133 2 1 1347 4897 151 29 19 chr15 99924904 99925735 -3569239 - Lx LINE L1 0 6654 5816 1 1347 1011 259 74 101 chr15 99925834 99926160 -3568814 - MTE2a LTR MaLR 0 379 63 1 1347 189 107 0 0 chr15 99926464 99926492 -3568482 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1 1347 734 134 40 66 chr15 99926492 99926644 -3568330 - B1_Mur2 SINE Alu -1 148 1 1 1347 198 0 0 0 chr15 99926670 99926692 -3568282 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1347 1218 54 0 0 chr15 99926731 99926879 -3568095 - B1_Mus1 SINE Alu 0 148 1 1 1347 230 154 76 15 chr15 99926899 99926965 -3568009 - B3 SINE B2 0 216 147 1 1347 1222 57 6 0 chr15 99927768 99927926 -3567048 - B2_Mm1t SINE B2 -3 190 32 1 1347 1002 166 20 11 chr15 99927933 99928133 -3566841 - Lx5 LINE L1 -121 6929 6757 1 1347 225 0 0 0 chr15 99928133 99928158 -3566816 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 1347 939 111 30 0 chr15 99928178 99928313 -3566661 - B2_Mm2 SINE B2 -55 140 2 1 1347 440 255 149 87 chr15 99928435 99928716 -3566258 + RMER10A LTR ERVL 87 384 -58 1 1347 785 114 98 0 chr15 99928716 99928839 -3566135 + B1_Mur3 SINE Alu 2 136 -13 1 1347 231 36 0 0 chr15 99928839 99928867 -3566107 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 1347 440 255 149 87 chr15 99928867 99928919 -3566055 + RMER10A LTR ERVL 385 441 -1 1 1347 298 172 113 42 chr15 99928995 99929091 -3565883 - PB1D10 SINE Alu 0 117 10 1 1347 3637 119 91 11 chr15 99929796 99930431 -3564543 - RMER6A LTR ERVK 0 756 71 1 1347 577 230 138 12 chr15 99931492 99931597 -3563377 - ID_B1 SINE B4 -9 215 97 1 1347 342 0 0 0 chr15 99931597 99931635 -3563339 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1347 577 230 138 12 chr15 99931635 99931696 -3563278 - ID_B1 SINE B4 -128 96 29 1 1347 1867 232 72 52 chr15 99932116 99932656 -3562318 - RLTR20A1 LTR ERVK 0 551 1 1 1347 394 205 86 86 chr15 99932815 99932943 -3562031 + MT2B LTR ERVL 131 258 -343 1 1347 623 198 85 31 chr15 99932856 99932986 -3561988 + B1_Mur4 SINE Alu 9 145 -5 1 1347 197 184 0 39 chr15 99933493 99933544 -3561430 + CT-rich Low_complexity Low_complexity 3 51 0 1 1347 935 214 62 5 chr15 99933547 99933740 -3561234 - B3 SINE B2 -11 205 2 1 1347 396 250 80 9 chr15 99933770 99933883 -3561091 - L1MB8 LINE L1 -171 6007 5887 1 1347 311 260 0 14 chr15 99933885 99933959 -3561015 + CT-rich Low_complexity Low_complexity 1 73 0 1 1347 843 149 22 7 chr15 99933959 99934094 -3560880 - B1_Mur4 SINE Alu -1 149 13 1 1347 307 253 27 14 chr15 99934102 99934227 -3560747 - L1MB8 LINE L1 -372 5802 5674 1 1347 781 52 252 0 chr15 99934402 99934517 -3560457 - B1_Mm SINE Alu -2 145 2 1 1347 205 191 0 0 chr15 99934590 99934632 -3560342 + A-rich Low_complexity Low_complexity 1 42 0 1 1347 721 204 0 7 chr15 99935007 99935150 -3559824 - B3 SINE B2 -9 207 66 1 1347 364 266 95 16 chr15 99935240 99935366 -3559608 + B1F2 SINE Alu 1 136 -13 1 1347 261 154 58 58 chr15 99935441 99935510 -3559464 - B1F SINE Alu -26 123 55 1 1347 260 132 0 70 chr15 99935477 99935534 -3559440 - B1_Mus2 SINE Alu -29 118 66 1 1347 461 174 88 35 chr15 99935543 99935656 -3559318 - B1F SINE Alu -29 120 2 1 1347 1033 184 8 101 chr15 99936179 99936311 -3558663 + URR1A DNA MER1_type 2 125 -101 1 1347 1369 95 26 0 chr15 99936311 99936501 -3558473 + B2_Mm2 SINE B2 1 195 0 1 1347 1033 184 8 101 chr15 99936501 99936525 -3558449 + URR1A DNA MER1_type 126 146 -80 1 1347 747 108 0 0 chr15 99936525 99936636 -3558338 + (TC)n Simple_repeat Simple_repeat 2 112 0 1 1347 1023 128 14 0 chr15 99936638 99936786 -3558188 - B1_Mur4 SINE Alu 0 150 1 1 1347 1033 184 8 101 chr15 99936786 99936873 -3558101 + URR1A DNA MER1_type 147 226 0 1 1347 30 0 0 0 chr15 99936984 99937014 -3557960 + AT_rich Low_complexity Low_complexity 1 30 0 1 1347 330 353 0 0 chr15 99937498 99937600 -3557374 + (CA)n Simple_repeat Simple_repeat 1 102 0 1 1347 1243 14 0 0 chr15 99938032 99938170 -3556804 + B1_Mus2 SINE Alu 1 138 -9 1 1347 180 0 0 0 chr15 99938179 99938199 -3556775 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 1347 232 266 234 0 chr15 99938842 99938936 -3556038 - MIR SINE MIR -59 149 34 1 1347 192 152 0 0 chr15 99939009 99939042 -3555932 + (CTGTG)n Simple_repeat Simple_repeat 1 33 0 1 1347 368 210 26 95 chr15 99939255 99939371 -3555603 + MT2B LTR ERVL 149 256 -345 1 1347 824 176 0 7 chr15 99939280 99939417 -3555557 + B1_Mur3 SINE Alu 14 149 0 1 1347 435 272 58 22 chr15 99939913 99940052 -3554922 - RSINE1 SINE B4 -19 146 3 1 1347 251 185 74 0 chr15 99940960 99941014 -3553960 - B1F SINE Alu -2 147 90 1 1347 499 264 28 35 chr15 99941530 99941675 -3553299 + RSINE1 SINE B4 3 146 -19 1 1347 497 245 81 13 chr15 99943111 99943260 -3551714 + RSINE1 SINE B4 5 163 -2 1 1347 259 265 29 0 chr15 99943333 99943401 -3551573 + ID SINE ID 5 74 -150 1 1347 637 116 35 35 chr15 99943677 99943793 -3551181 - PB1D10 SINE Alu 0 117 2 1 1347 432 255 133 6 chr15 99943973 99944131 -3550843 - L2c LINE L2 -6 3381 3204 1 1347 499 273 0 9 chr15 99945151 99945262 -3549712 + PB1D10 SINE Alu 1 110 -7 1 1347 210 71 0 0 chr15 99945590 99945618 -3549356 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1 1347 21 0 0 0 chr15 99946680 99946701 -3548273 + AT_rich Low_complexity Low_complexity 1 21 0 1 1347 412 270 0 0 chr15 99946704 99946778 -3548196 + B1_Mur3 SINE Alu 2 75 -74 1 1347 476 97 21 0 chr15 99947076 99947164 -3547810 - B1_Mus2 SINE Alu -10 137 17 1 1347 21 0 0 0 chr15 99947278 99947299 -3547675 + AT_rich Low_complexity Low_complexity 1 21 0 1 1347 829 188 0 35 chr15 99947302 99947445 -3547529 + B1_Mur3 SINE Alu 2 139 -10 1 1347 243 0 0 0 chr15 99947445 99947472 -3547502 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1347 531 222 92 43 chr15 99947540 99947681 -3547293 - B1_Mur2 SINE Alu 0 149 2 1 1347 418 340 0 0 chr15 99947764 99947870 -3547104 - MER5A DNA MER1_type -79 110 5 1 1347 297 278 78 0 chr15 99947910 99948000 -3546974 + L2 LINE L2 2309 2405 -1014 1 1347 519 194 30 30 chr15 99948019 99948120 -3546854 - B1F2 SINE Alu -8 141 41 1 1347 233 268 35 18 chr15 99948074 99948131 -3546843 - 4.5SRNA scRNA scRNA -10 84 27 1 1347 4143 178 127 10 chr15 99948144 99948941 -3546033 - RMER19B LTR ERVK -12 890 1 1 1347 867 271 117 52 chr15 99949066 99949409 -3545565 + MTE2a LTR MaLR 8 372 -7 1 1347 590 229 0 0 chr15 99949506 99949611 -3545363 + RSINE1 SINE B4 23 127 -38 1 1347 30 27 0 0 chr15 99950226 99950263 -3544711 + AT_rich Low_complexity Low_complexity 1 37 0 1 1347 202 154 0 84 chr15 99950342 99950413 -3544561 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 1 1347 201 147 0 0 chr15 99950438 99950472 -3544502 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 1 1347 1210 28 14 0 chr15 99950502 99950647 -3544327 + B1_Mus1 SINE Alu 2 148 0 1 1347 1356 64 12 0 chr15 99950832 99951004 -3543970 - B2_Mm1a SINE B2 -19 174 1 1 1347 459 279 0 24 chr15 99952135 99952260 -3542714 - RSINE1 SINE B4 0 165 44 1 1347 325 333 92 21 chr15 99952984 99953125 -3541849 - HAL1 LINE L1 -105 2402 2252 1 1347 461 257 10 10 chr15 99953127 99953229 -3541745 + PB1D10 SINE Alu 7 108 -9 1 1347 264 288 50 50 chr15 99953281 99953519 -3541455 + RMER17D LTR ERVK 214 451 -438 1 1347 374 85 17 0 chr15 99953561 99953620 -3541354 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 1347 550 241 69 57 chr15 99953622 99953785 -3541189 - B3A SINE B2 -52 164 3 1 1347 389 283 10 0 chr15 99953866 99953965 -3541009 + ID_B1 SINE B4 86 185 -39 1 1347 304 288 42 59 chr15 99953965 99953984 -3540990 + PB1D9 SINE Alu 5 120 0 1 1347 269 254 14 0 chr15 99954065 99954136 -3540838 + B1_Mus2 SINE Alu 71 142 -5 1 1347 180 0 0 0 chr15 99954435 99954455 -3540519 + (TTCC)n Simple_repeat Simple_repeat 3 22 0 1 1347 409 213 13 0 chr15 99955806 99955881 -3539093 - MamGypLTR3 LTR Gypsy -83 756 681 1 1347 325 169 138 0 chr15 99956489 99956554 -3538420 + PB1D10 SINE Alu 21 94 -23 1 1347 213 271 0 0 chr15 99958246 99958294 -3536680 + B1F2 SINE Alu 1 48 -101 1 1347 511 253 79 110 chr15 99958477 99958641 -3536333 - RSINE1 SINE B4 0 165 7 1 1347 456 244 0 0 chr15 99958654 99958736 -3536238 - PB1D7 SINE Alu -26 94 13 1 1347 310 287 0 69 chr15 99958736 99958755 -3536219 - ID_B1 SINE B4 -52 172 79 1 1347 250 258 147 51 chr15 99958755 99958783 -3536191 - MT2B2 LTR ERVL -354 247 106 1 1347 1111 49 27 27 chr15 99959197 99959345 -3535629 - B1_Mus1 SINE Alu 0 148 1 1 1347 216 0 0 0 chr15 99959657 99959681 -3535293 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 1 1347 203 56 56 0 chr15 99960258 99960294 -3534680 + (TTTTTG)n Simple_repeat Simple_repeat 4 41 0 1 1347 1179 61 0 13 chr15 99960299 99960448 -3534526 - B1_Mus1 SINE Alu -1 147 1 1 1347 450 345 56 17 chr15 99960501 99960636 -3534338 - MER58A DNA MER1_type -1 223 82 1 1347 2162 80 42 54 chr15 99960636 99960967 -3534007 - ORR1A2 LTR MaLR 0 327 1 1 1347 450 345 56 17 chr15 99960967 99961011 -3533963 - MER58A DNA MER1_type -143 81 37 1 1347 358 238 60 0 chr15 99961050 99961134 -3533840 + ID_B1 SINE B4 135 223 -1 1 1347 275 321 44 18 chr15 99961152 99961266 -3533708 + PB1D10 SINE Alu 1 117 0 1 1347 1045 122 14 0 chr15 99961354 99961501 -3533473 + B1_Mur4 SINE Alu 1 149 -1 1 1347 285 253 66 92 chr15 99961884 99962042 -3532932 + BC1_Mm scRNA scRNA 5 151 -1 1 1347 749 214 33 22 chr15 99963503 99963685 -3531289 + B3A SINE B2 15 198 0 1 1347 1035 177 88 0 chr15 99963715 99963907 -3531067 + B3 SINE B2 2 210 -6 1 1347 222 260 0 0 chr15 99964141 99964191 -3530783 + G-rich Low_complexity Low_complexity 1 50 0 1 1347 898 255 14 0 chr15 99964448 99964656 -3530318 - B3 SINE B2 -5 211 1 1 1347 729 164 60 0 chr15 99964747 99964881 -3530093 + B1_Mus1 SINE Alu 6 147 -1 1 1347 1723 99 72 119 chr15 99965077 99965422 -3529552 - ORR1B1 LTR MaLR 0 329 1 1 1347 4999 193 72 137 chr15 99965422 99967168 -3527806 - ORR1B1-int LTR MaLR 0 1963 331 1 1347 539 68 0 0 chr15 99967166 99967239 -3527735 - ORR1B1-int LTR MaLR -1890 73 1 1 1347 1978 114 67 91 chr15 99967239 99967614 -3527360 - ORR1B1 LTR MaLR 0 394 29 1 1347 1325 101 5 26 chr15 99968189 99968382 -3526592 + B2_Mm1t SINE B2 1 189 -4 1 1347 236 204 0 75 chr15 99968515 99968568 -3526406 + PB1D10 SINE Alu 1 49 -68 1 1347 904 195 79 60 chr15 99968914 99968947 -3526027 - ORR1D1 LTR MaLR -102 272 243 1 1347 414 0 0 0 chr15 99968947 99968993 -3525981 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1347 904 195 79 60 chr15 99968993 99969226 -3525748 - ORR1D1 LTR MaLR -132 242 1 1 1347 436 195 26 0 chr15 99969433 99969510 -3525464 + PB1D10 SINE Alu 33 111 -6 1 1347 341 292 336 82 chr15 99969540 99969772 -3525202 + B4A SINE B4 1 290 -2 1 1347 248 342 79 0 chr15 99969870 99969946 -3525028 + ID SINE ID 1 82 -142 1 1347 2524 259 97 36 chr15 99970263 99971332 -3523642 + RMER1C Other Other 140 1339 -3 1 1347 245 234 30 45 chr15 99971531 99971598 -3523376 - MLT1M LTR MaLR -379 293 228 1 1347 240 273 13 0 chr15 99971744 99971821 -3523153 + (TG)n Simple_repeat Simple_repeat 1 78 0 1 1347 201 273 0 0 chr15 99971894 99971949 -3523025 - L2 LINE L2 -937 2482 2428 1 1347 1172 74 0 7 chr15 99973142 99973291 -3521683 + B1_Mus1 SINE Alu 1 148 0 1 1347 198 0 0 0 chr15 99973330 99973352 -3521622 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1347 707 262 82 25 chr15 99973400 99973596 -3521378 - B3 SINE B2 -6 210 4 1 1347 1150 82 0 0 chr15 99974571 99974718 -3520256 + B1_Mus2 SINE Alu 1 147 0 1 1347 230 116 23 0 chr15 99974730 99974773 -3520201 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1 1347 851 151 29 0 chr15 99974971 99975110 -3519864 + B1_Mus1 SINE Alu 5 147 -1 1 1347 375 78 0 0 chr15 99975266 99975317 -3519657 + (GGA)n Simple_repeat Simple_repeat 1 51 0 1 1347 436 298 47 11 chr15 99975408 99975564 -3519410 + B4A SINE B4 57 222 -70 1 1347 655 231 14 24 chr15 99977010 99977206 -3517768 - B3 SINE B2 -3 192 2 1 1347 318 50 0 0 chr15 99977679 99977719 -3517255 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1347 478 215 0 0 chr15 99977859 99977955 -3517019 - B3 SINE B2 -102 96 1 1 1347 300 83 0 0 chr15 99978244 99978292 -3516682 + (CTGGGG)n Simple_repeat Simple_repeat 5 52 0 1 1347 298 248 117 117 chr15 99978304 99978432 -3516542 + ID_B1 SINE B4 30 157 -67 1 1347 258 215 45 30 chr15 99978378 99978445 -3516529 + B1_Mm SINE Alu 24 91 -56 1 1347 404 183 45 12 chr15 99978765 99978877 -3516097 - B3A SINE B2 -78 117 1 1 1347 1286 87 49 0 chr15 99979108 99979292 -3515682 - B2_Mm2 SINE B2 -1 194 2 1 1347 1519 37 37 0 chr15 99979302 99979490 -3515484 - B2_Mm2 SINE B2 0 195 1 1 1347 180 0 0 0 chr15 99982075 99982095 -3512879 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1347 285 29 0 0 chr15 99982306 99982340 -3512634 + (CTG)n Simple_repeat Simple_repeat 1 34 0 1 1347 233 233 0 0 chr15 99982984 99983027 -3511947 + B1_Mus2 SINE Alu 5 47 -100 1 1347 305 192 161 37 chr15 99983180 99983261 -3511713 + PB1D10 SINE Alu 27 117 0 1 1347 403 276 11 0 chr15 99983271 99983358 -3511616 + PB1D10 SINE Alu 1 88 -29 1 1347 26 50 0 0 chr15 99983430 99983470 -3511504 + AT_rich Low_complexity Low_complexity 1 40 0 1 1347 234 284 212 22 chr15 99984224 99984361 -3510613 + RSINE1 SINE B4 3 165 0 1 1347 285 167 0 0 chr15 99984361 99984415 -3510559 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1347 1393 89 16 0 chr15 99985179 99985370 -3509604 - B2_Mm2 SINE B2 0 195 2 1 1347 357 24 0 0 chr15 99986171 99986213 -3508761 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1347 973 215 26 0 chr15 99986542 99986737 -3508237 - B3 SINE B2 -6 210 11 1 1347 625 164 26 28 chr15 99987093 99987236 -3507738 + B1_Mur1 SINE Alu 8 149 -1 1 1347 611 226 72 0 chr15 99987901 99988042 -3506932 + B1_Mur2 SINE Alu 1 149 0 1 1347 204 125 0 0 chr15 99988050 99988082 -3506892 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 1 1347 615 261 142 11 chr15 99988517 99988707 -3506267 - B3 SINE B2 -1 215 1 1 1347 220 343 107 10 chr15 99989218 99989321 -3505653 - RSINE1 SINE B4 -50 115 3 1 1347 369 0 0 0 chr15 99989404 99989445 -3505529 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1347 293 315 120 0 chr15 99989452 99989560 -3505414 - RSINE1 SINE B4 -28 137 17 1 1347 394 241 138 28 chr15 99989871 99990016 -3504958 + RSINE1 SINE B4 3 163 -2 1 1347 250 270 108 0 chr15 99990609 99990683 -3504291 - ID4_ SINE ID -1 82 1 1 1347 1498 65 0 5 chr15 99991616 99991801 -3503173 - B2_Mm2 SINE B2 -11 184 1 1 1347 312 310 146 8 chr15 99992642 99992772 -3502202 - MIR SINE MIR -96 166 19 1 1347 29 0 0 0 chr15 99992973 99993002 -3501972 + AT_rich Low_complexity Low_complexity 1 29 0 1 1347 1176 37 0 0 chr15 99993616 99993751 -3501223 + B1_Mus1 SINE Alu 2 136 -12 1 1347 216 0 0 0 chr15 99993752 99993776 -3501198 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1347 556 322 44 24 chr15 99994181 99994521 -3500453 - Lx8 LINE L1 -249 7224 6878 1 1347 669 257 7 7 chr15 99994584 99994733 -3500241 + RSINE1 SINE B4 2 150 -15 1 1347 339 326 20 60 chr15 99995450 99995600 -3499374 + RSINE1 SINE B4 6 149 -16 1 1347 815 211 34 0 chr15 99996653 99996828 -3498146 - B3 SINE B2 -9 207 27 1 1347 743 179 22 15 chr15 99997052 99997188 -3497786 + B1_Mur2 SINE Alu 4 140 -9 1 1347 246 280 109 27 chr15 99997366 99997476 -3497498 + B1F SINE Alu 31 149 0 1 1347 351 215 25 12 chr15 99997690 99997770 -3497204 - ID4_ SINE ID -2 81 1 1 1347 21 0 0 0 chr15 99998261 99998282 -3496692 + AT_rich Low_complexity Low_complexity 1 21 0 1 1347 24 53 0 0 chr15 99998540 99998578 -3496396 + AT_rich Low_complexity Low_complexity 1 38 0 1 1347 306 229 19 81 chr15 99998764 99998889 -3496085 + B1F SINE Alu 1 149 0 1 1347 443 236 25 91 chr15 99999864 99999985 -3494989 + B4A SINE B4 21 133 -159 1 1347 523 301 10 30 chr15 100000006 100000205 -3494769 + B3A SINE B2 4 198 0 1 1347 202 204 23 0 chr15 100000229 100000273 -3494701 + C-rich Low_complexity Low_complexity 5 49 0 2 1347 1319 51 84 17 chr15 100000302 100000481 -3494493 - B2_Mm2 SINE B2 -4 191 1 3 1347 189 0 0 0 chr15 100000484 100000505 -3494469 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1347 258 267 82 9 chr15 100000651 100000746 -3494228 + B1F1 SINE Alu 47 148 -1 5 1347 345 108 192 52 chr15 100002279 100002371 -3492603 + B1_Mur4 SINE Alu 39 141 -9 6 1347 397 244 208 0 chr15 100002483 100002651 -3492323 - B3 SINE B2 -13 203 1 7 1347 222 37 0 0 chr15 100002689 100002716 -3492258 + (T)n Simple_repeat Simple_repeat 1 27 0 8 1347 1104 82 7 0 chr15 100002716 100002863 -3492111 - B1_Mus1 SINE Alu 0 148 1 9 1347 268 363 87 12 chr15 100004166 100004420 -3490554 - B4A SINE B4 -18 274 2 1 1347 330 26 0 0 chr15 100004430 100004469 -3490505 + (TTTCC)n Simple_repeat Simple_repeat 3 41 0 1 1347 450 237 17 42 chr15 100004469 100004588 -3490386 - PB1D10 SINE Alu -1 116 1 1 1347 488 216 169 15 chr15 100004626 100004762 -3490212 - RSINE1 SINE B4 -5 160 4 1 1347 293 288 12 12 chr15 100005054 100005135 -3489839 + ID SINE ID 2 82 -142 1 1347 310 300 45 9 chr15 100005991 100006102 -3488872 + PB1D10 SINE Alu 3 117 0 1 1347 859 158 14 0 chr15 100006104 100006250 -3488724 + B1_Mur3 SINE Alu 2 149 0 1 1347 227 288 17 0 chr15 100006298 100006357 -3488617 + MIR SINE MIR 139 198 -64 1 1347 245 191 0 0 chr15 100006375 100006443 -3488531 + B2_Mm1t SINE B2 122 189 -4 1 1347 1435 77 6 0 chr15 100006444 100006627 -3488347 + B2_Mm1a SINE B2 1 184 -9 1 1347 278 292 56 96 chr15 100006938 100007063 -3487911 + RSINE1 SINE B4 38 157 -8 2 1347 225 94 0 0 chr15 100007082 100007114 -3487860 + (TGGG)n Simple_repeat Simple_repeat 1 32 0 2 1347 309 228 0 0 chr15 100007164 100007221 -3487753 + B3 SINE B2 57 113 -103 2 1347 222 331 35 42 chr15 100007711 100007853 -3487121 - MIRc SINE MIR -125 143 3 2 1348 23 0 0 0 chr15 100007950 100007973 -3487001 + AT_rich Low_complexity Low_complexity 1 23 0 2 1348 256 306 0 23 chr15 100007983 100008070 -3486904 + (TG)n Simple_repeat Simple_repeat 2 86 0 2 1348 244 219 31 0 chr15 100008194 100008258 -3486716 - B4A SINE B4 -204 88 23 2 1348 384 331 60 20 chr15 100008305 100008456 -3486518 + RSINE1 SINE B4 9 165 0 2 1348 180 0 0 0 chr15 100008606 100008626 -3486348 + (TTGG)n Simple_repeat Simple_repeat 2 21 0 2 1348 617 206 29 7 chr15 100008626 100008763 -3486211 - B1_Mur1 SINE Alu -9 140 1 2 1348 390 232 60 10 chr15 100009091 100009191 -3485783 - PB1D9 SINE Alu -1 119 15 3 1348 2824 24 48 0 chr15 100009447 100009779 -3485195 - L1Md_A LINE L1 0 6582 6235 3 1348 234 91 0 0 chr15 100009784 100009817 -3485157 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 3 1348 1214 62 0 0 chr15 100009817 100009963 -3485011 - B1_Mus2 SINE Alu 0 147 2 3 1348 246 62 0 0 chr15 100010244 100010276 -3484698 + (TCC)n Simple_repeat Simple_repeat 3 34 0 3 1348 235 238 111 0 chr15 100010474 100010537 -3484437 - MLT1J LTR MaLR -335 177 108 3 1348 341 260 60 0 chr15 100010666 100010766 -3484208 - B3A SINE B2 -87 111 6 3 1348 419 201 137 48 chr15 100011313 100011459 -3483515 + RSINE1 SINE B4 7 165 0 3 1348 229 229 82 41 chr15 100012496 100012569 -3482405 + L2b LINE L2 3262 3337 -38 3 1348 292 242 266 32 chr15 100012631 100012789 -3482185 - L2a LINE L2 -3 3423 3229 3 1348 279 163 0 0 chr15 100012800 100012849 -3482125 - L2a LINE L2 -261 3165 3117 3 1348 913 242 29 8 chr15 100012881 100013243 -3481731 + L2a LINE L2 2920 3307 -68 4 1348 962 144 14 14 chr15 100013631 100013779 -3481195 + B1_Mur3 SINE Alu 1 148 -1 4 1348 281 140 18 0 chr15 100013781 100013838 -3481136 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 1348 1217 61 0 0 chr15 100014358 100014505 -3480469 - B1_Mus1 SINE Alu 0 148 2 4 1348 446 207 224 0 chr15 100014861 100014977 -3479997 + B1_Mur1 SINE Alu 1 142 -7 4 1348 424 231 134 20 chr15 100015190 100015357 -3479617 + B3 SINE B2 1 184 -11 4 1348 527 321 25 25 chr15 100015357 100015520 -3479454 + RSINE1 SINE B4 2 164 -1 4 1348 1246 109 11 5 chr15 100015529 100015714 -3479260 - B2_Mm1t SINE B2 -6 187 2 4 1348 460 287 28 42 chr15 100017310 100017323 -3477651 + ID_B1 SINE B4 82 219 -3 4 1348 746 157 18 0 chr15 100017323 100017450 -3477524 + B1_Mur1 SINE Alu 16 144 -5 4 1348 440 280 128 28 chr15 100018055 100018235 -3476739 + B3A SINE B2 1 198 0 5 1348 319 267 13 0 chr15 100018307 100018382 -3476592 + ID4_ SINE ID 6 81 -2 5 1348 1382 92 5 0 chr15 100018443 100018627 -3476347 + B2_Mm1t SINE B2 2 186 -7 5 1348 1289 14 0 0 chr15 100018633 100018774 -3476200 + B1_Mm SINE Alu 1 141 -6 5 1348 261 0 0 0 chr15 100018777 100018806 -3476168 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 5 1348 325 181 115 21 chr15 100018899 100018995 -3475979 - PB1D10 SINE Alu -2 115 11 5 1348 783 240 86 10 chr15 100019095 100019293 -3475681 - B3 SINE B2 -3 213 1 5 1348 246 136 0 0 chr15 100019872 100019916 -3475058 + (TC)n Simple_repeat Simple_repeat 1 44 0 5 1348 324 0 0 0 chr15 100019929 100019965 -3475009 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1348 442 296 33 52 chr15 100019965 100020118 -3474856 - RSINE1 SINE B4 -13 152 3 5 1348 842 228 68 5 chr15 100020788 100020978 -3473996 + ID_B1 SINE B4 22 223 -1 6 1348 242 153 13 89 chr15 100020979 100020998 -3473976 + polypurine Low_complexity Low_complexity 2 16 0 6 1348 850 167 35 0 chr15 100020998 100021142 -3473832 + B1_Mur4 SINE Alu 1 149 -1 6 1348 242 153 13 89 chr15 100021142 100021201 -3473773 + GA-rich Low_complexity Low_complexity 17 74 0 6 1348 296 276 100 33 chr15 100021789 100021879 -3473095 + PB1D10 SINE Alu 2 97 -20 6 1348 669 184 94 14 chr15 100021887 100022025 -3472949 + B1_Mur2 SINE Alu 1 149 0 6 1348 255 250 0 0 chr15 100022071 100022139 -3472835 + (TA)n Simple_repeat Simple_repeat 2 69 0 6 1348 195 129 0 0 chr15 100022141 100022172 -3472802 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1348 549 220 56 21 chr15 100022179 100022323 -3472651 + B3 SINE B2 68 216 0 6 1348 355 309 80 80 chr15 100022389 100022494 -3472480 + B4A SINE B4 117 230 -62 6 1348 607 215 112 35 chr15 100022494 100022663 -3472311 + B3A SINE B2 1 182 -16 7 1348 355 309 80 80 chr15 100022663 100022733 -3472241 + B4A SINE B4 231 292 0 6 1348 242 154 0 0 chr15 100022858 100022897 -3472077 + Alu SINE Alu 126 164 -11 7 1348 419 252 42 34 chr15 100023108 100023227 -3471747 - RSINE1 SINE B4 -6 159 40 7 1348 249 175 276 17 chr15 100023777 100023835 -3471139 + ID4_ SINE ID 1 73 -10 7 1348 468 0 0 0 chr15 100023842 100023894 -3471080 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 1348 420 281 73 24 chr15 100023902 100024026 -3470948 - B1F SINE Alu -19 130 1 7 1348 215 176 0 0 chr15 100024093 100024127 -3470847 + PB1D7 SINE Alu 1 34 -86 7 1348 22 0 0 0 chr15 100025072 100025094 -3469880 + AT_rich Low_complexity Low_complexity 1 22 0 7 1348 900 118 52 0 chr15 100025210 100025346 -3469628 - B1_Mus1 SINE Alu -1 147 5 7 1348 599 191 72 78 chr15 100025921 100026074 -3468900 + B4 SINE B4 70 221 -71 7 1348 1153 36 0 0 chr15 100025937 100026076 -3468898 + B1_Mm SINE Alu 6 144 -3 8 1348 242 29 0 28 chr15 100026076 100026112 -3468862 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 8 1348 371 259 145 75 chr15 100026112 100026131 -3468843 + FAM SINE Alu 294 310 -1 8 1348 375 304 9 0 chr15 100026565 100026680 -3468294 + PB1D10 SINE Alu 2 117 0 8 1348 493 194 0 58 chr15 100026779 100026883 -3468091 + B4 SINE B4 195 292 0 7 1348 1283 119 11 0 chr15 100026997 100027182 -3467792 + B2_Mm2 SINE B2 1 187 -8 8 1348 231 244 16 0 chr15 100027201 100027252 -3467722 + MIR SINE MIR 27 83 -185 8 1348 236 324 0 63 chr15 100027720 100027799 -3467175 - ID_B1 SINE B4 -109 115 42 8 1348 869 306 29 38 chr15 100027886 100028199 -3466775 - MTE2b LTR MaLR -19 360 51 8 1348 241 265 53 117 chr15 100028192 100028286 -3466688 - MTE2b LTR MaLR -281 98 11 8 1348 1180 54 0 0 chr15 100028351 100028498 -3466476 + B1_Mus2 SINE Alu 1 147 0 8 1348 654 211 71 24 chr15 100028591 100028761 -3466213 + B3 SINE B2 1 178 -38 8 1348 266 324 64 9 chr15 100030726 100030835 -3464139 + PB1D10 SINE Alu 3 117 0 9 1348 236 211 64 90 chr15 100030835 100030913 -3464061 + B3 SINE B2 2 77 -139 9 1348 1655 36 0 0 chr15 100031097 100031289 -3463685 + B2_Mm1a SINE B2 2 193 0 9 1348 974 135 0 0 chr15 100031601 100031742 -3463232 + B1_Mus1 SINE Alu 8 148 0 9 1348 408 277 43 81 chr15 100031603 100031764 -3463210 + B4A SINE B4 94 248 -44 9 1348 187 145 224 52 chr15 100032910 100032968 -3462006 - MIRc SINE MIR -180 88 21 9 1348 581 272 28 151 chr15 100033772 100033869 -3461105 - RLTR12B LTR ERVK -24 504 409 9 1348 1315 77 55 0 chr15 100033869 100034052 -3460922 - B2_Mm2 SINE B2 -2 193 1 9 1348 581 276 35 140 chr15 100034052 100034458 -3460516 - RLTR12B LTR ERVK -120 408 11 9 1348 243 246 246 0 chr15 100034495 100034556 -3460418 - PB1D7 SINE Alu -7 113 38 9 1348 958 65 253 0 chr15 100034826 100034980 -3459994 - B2_Mm2 SINE B2 -2 193 1 9 1348 415 244 67 0 chr15 100035793 100035898 -3459076 - B1F SINE Alu -9 111 1 1 1348 261 330 57 28 chr15 100035804 100035910 -3459064 - ID_B1 SINE B4 -46 178 70 1 1348 536 149 108 36 chr15 100035965 100036076 -3458898 + PB1D9 SINE Alu 2 120 0 1 1348 556 318 5 67 chr15 100036332 100036541 -3458433 - B4 SINE B4 0 292 97 1 1348 181 244 65 109 chr15 100037811 100037903 -3457071 + MIRb SINE MIR 37 124 -144 1 1348 2064 143 87 20 chr15 100038759 100039116 -3455858 - ORR1C2 LTR MaLR -3 381 1 1 1348 240 216 20 0 chr15 100039486 100039537 -3455437 + MIR SINE MIR 2 53 -209 1 1348 180 0 0 0 chr15 100039755 100039775 -3455199 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1348 1234 61 0 0 chr15 100039788 100039935 -3455039 - B1_Mus2 SINE Alu 0 147 1 1 1348 530 220 10 0 chr15 100040544 100040644 -3454330 - PB1D9 SINE Alu -18 102 2 1 1348 283 300 88 35 chr15 100040644 100040698 -3454276 - ID SINE ID -142 82 23 1 1348 462 277 45 0 chr15 100041151 100041263 -3453711 + B3A SINE B2 17 133 -65 1 1348 457 208 0 118 chr15 100041265 100041401 -3453573 + B3A SINE B2 79 198 0 1 1348 571 177 56 0 chr15 100041426 100041536 -3453438 + B3 SINE B2 5 125 -68 1 1348 1084 89 0 27 chr15 100041545 100041695 -3453279 - B1_Mus2 SINE Alu 0 147 2 1 1348 1485 59 5 0 chr15 100041744 100041930 -3453044 - B2_Mm1a SINE B2 -6 187 1 1 1348 32 0 0 0 chr15 100041932 100041964 -3453010 + AT_rich Low_complexity Low_complexity 1 32 0 1 1348 972 128 13 7 chr15 100041968 100042117 -3452857 + B1_Mur4 SINE Alu 1 150 0 1 1348 488 246 203 0 chr15 100042937 100043055 -3451919 + RSINE1 SINE B4 13 154 -11 1 1348 472 266 28 111 chr15 100043351 100043503 -3451471 - B3A SINE B2 0 198 57 1 1348 267 31 0 0 chr15 100043503 100043535 -3451439 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1 1348 1477 70 16 0 chr15 100043539 100043724 -3451250 - B2_Mm2 SINE B2 -7 188 1 1 1348 472 266 28 111 chr15 100043724 100043782 -3451192 - B3A SINE B2 -142 56 3 1 1348 675 181 0 8 chr15 100043801 100043918 -3451056 - B1_Mur4 SINE Alu -1 149 34 1 1348 248 247 11 34 chr15 100044038 100044126 -3450848 + PB1D10 SINE Alu 32 117 0 1 1348 1152 115 54 5 chr15 100044198 100044382 -3450592 - B2_Mm2 SINE B2 -1 194 2 1 1348 759 236 0 0 chr15 100044630 100044770 -3450204 + B1_Mus2 SINE Alu 1 140 -7 1 1348 611 244 114 0 chr15 100045369 100045562 -3449412 + B3 SINE B2 1 215 -1 1 1348 26 64 0 0 chr15 100047061 100047108 -3447866 + AT_rich Low_complexity Low_complexity 1 47 0 1 1348 291 114 0 0 chr15 100047585 100047629 -3447345 + (T)n Simple_repeat Simple_repeat 1 44 0 1 1348 321 298 115 55 chr15 100047886 100047968 -3447006 - MER33 DNA MER1_type -3 321 241 1 1348 611 219 31 0 chr15 100047968 100048096 -3446878 - B1_Mur2 SINE Alu -17 132 1 1 1348 321 298 115 55 chr15 100048096 100048230 -3446744 - MER33 DNA MER1_type -84 240 92 1 1348 315 239 62 21 chr15 100048447 100048540 -3446434 - PB1D10 SINE Alu -22 98 2 1 1348 296 250 56 111 chr15 100048948 100048961 -3446013 - PB1D7 SINE Alu 0 120 109 1 1348 459 0 0 0 chr15 100048961 100049012 -3445962 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 1348 303 214 69 84 chr15 100049012 100049124 -3445850 - B1F1 SINE Alu -12 108 2 1 1348 1033 98 165 0 chr15 100050219 100050383 -3444591 - B2_Mm2 SINE B2 -1 194 4 1 1348 349 216 62 55 chr15 100051092 100051204 -3443770 - PB1D7 SINE Alu 0 120 2 1 1348 423 196 163 0 chr15 100051284 100051376 -3443598 + ID_B1 SINE B4 112 218 -6 1 1348 324 282 68 8 chr15 100051957 100052075 -3442899 + PB1 SINE Alu 1 125 -2 1 1348 657 263 38 6 chr15 100052329 100052486 -3442488 - B3A SINE B2 -33 165 4 1 1348 968 183 47 12 chr15 100052583 100052754 -3442220 + B3 SINE B2 1 177 -39 1 1348 630 187 62 9 chr15 100052892 100053005 -3441969 + RSINE1 SINE B4 15 133 -32 1 1348 2055 138 66 105 chr15 100053024 100053462 -3441512 + RLTR23 LTR ERV1 10 430 0 1 1348 192 97 0 0 chr15 100053796 100053827 -3441147 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 1 1348 282 296 79 8 chr15 100053997 100054123 -3440851 + RLTR6-int LTR ERV1 599 733 -6868 1 1348 361 333 23 6 chr15 100054468 100054643 -3440331 + RLTR6-int LTR ERV1 1290 1467 -6311 1 1348 269 349 20 50 chr15 100054668 100054870 -3440104 + RLTR6-int LTR ERV1 1647 1842 -5936 1 1348 284 294 22 89 chr15 100055101 100055280 -3439694 + RLTR6-int LTR ERV1 1812 1978 -2712 1 1348 1448 65 37 5 chr15 100055691 100055878 -3439096 + B2_Mm2 SINE B2 1 193 -2 1 1348 360 307 15 0 chr15 100055941 100056078 -3438896 + RLTR6-int LTR ERV1 2720 2858 -4748 1 1348 246 236 18 0 chr15 100056108 100056163 -3438811 - B1F2 SINE Alu -87 62 7 1 1348 342 209 62 52 chr15 100056224 100056320 -3438654 + B3A SINE B2 1 97 -101 1 1348 369 264 134 81 chr15 100056329 100056696 -3438278 - RMER10A LTR ERVL -25 417 12 1 1348 325 263 9 139 chr15 100056712 100056827 -3438147 + B3A SINE B2 92 191 -7 1 1348 1100 113 45 70 chr15 100056891 100057042 -3437932 + B2_Mm2 SINE B2 2 151 -44 1 1348 1213 48 0 0 chr15 100057042 100057187 -3437787 + B1_Mm SINE Alu 2 146 -1 1 1348 1100 113 45 70 chr15 100057187 100057206 -3437768 + B2_Mm2 SINE B2 152 168 -27 1 1348 279 0 0 0 chr15 100057206 100057237 -3437737 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1348 1100 113 45 70 chr15 100057237 100057264 -3437710 + B2_Mm2 SINE B2 169 194 -1 1 1348 321 258 128 8 chr15 100057465 100057590 -3437384 - B1_Mm SINE Alu -6 141 2 1 1348 236 222 28 0 chr15 100058223 100058295 -3436679 + C-rich Low_complexity Low_complexity 4 77 0 1 1348 41 97 0 17 chr15 100058483 100058662 -3436312 + GC_rich Low_complexity Low_complexity 1 176 0 1 1348 360 64 0 0 chr15 100059105 100059152 -3435822 + (CATA)n Simple_repeat Simple_repeat 2 48 0 1 1348 1280 83 28 6 chr15 100059187 100059369 -3435605 - B2_Mm2 SINE B2 -8 187 2 1 1348 233 304 149 50 chr15 100059442 100059563 -3435411 - L2b LINE L2 -17 3358 3226 1 1348 261 146 42 0 chr15 100059627 100059675 -3435299 + B1_Mus2 SINE Alu 3 52 -95 1 1348 337 288 48 54 chr15 100059958 100060105 -3434869 + ID_B1 SINE B4 68 213 -11 1 1348 1128 144 16 11 chr15 100060336 100060526 -3434448 + B2_Mm1t SINE B2 2 192 -1 1 1348 250 218 323 65 chr15 100060535 100060628 -3434346 + PB1D9 SINE Alu 1 117 0 1 1348 434 213 21 31 chr15 100060668 100060765 -3434209 + B3 SINE B2 33 128 -88 1 1348 201 39 0 0 chr15 100060896 100060922 -3434052 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1 1348 730 129 35 0 chr15 100060945 100061061 -3433913 - PB1D9 SINE Alu 0 120 1 1 1348 792 200 137 11 chr15 100061068 100061250 -3433724 - B3 SINE B2 -8 208 4 1 1348 899 129 13 13 chr15 100061273 100061422 -3433552 + B1_Mur4 SINE Alu 2 150 0 1 1348 226 263 160 8 chr15 100061465 100061584 -3433390 + L1M4 LINE L1 5385 5521 -653 1 1348 180 0 0 0 chr15 100061593 100061613 -3433361 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1348 881 58 0 55 chr15 100061613 100061741 -3433233 - B1_Mm SINE Alu 0 147 27 1 1348 369 286 30 53 chr15 100061878 100062011 -3432963 - B1_Mus1 SINE Alu -1 147 18 1 1348 496 220 162 43 chr15 100061955 100061979 -3432995 - CYRA11_Mm Unknown Y-chromosome -242 375 173 1 1348 849 103 121 6 chr15 100061979 100062136 -3432838 + URR1A DNA MER1_type 50 224 -2 1 1348 414 299 61 0 chr15 100062174 100062338 -3432636 + L1MB2 LINE L1 5662 5835 -336 1 1348 1232 41 7 0 chr15 100062388 100062534 -3432440 - B1_Mm SINE Alu 0 147 1 1 1348 305 187 53 0 chr15 100062678 100062753 -3432221 + L1MB2 LINE L1 6051 6129 -42 1 1348 532 204 91 0 chr15 100062754 100062886 -3432088 + B1_Mur4 SINE Alu 1 144 -6 1 1348 1183 48 7 0 chr15 100062981 100063126 -3431848 - B1_Mm SINE Alu -1 146 1 1 1348 410 229 92 62 chr15 100063783 100063913 -3431061 - MER82 DNA MER2_type -329 324 191 1 1348 489 285 111 0 chr15 100064042 100064186 -3430788 - B3A SINE B2 -11 187 28 1 1348 428 100 243 65 chr15 100064183 100064290 -3430684 - B2_Mm2 SINE B2 -23 172 47 1 1348 1066 69 138 0 chr15 100064322 100064481 -3430493 - B2_Mm2 SINE B2 -14 181 1 1 1348 422 307 107 0 chr15 100064558 100064698 -3430276 - RSINE1 SINE B4 -4 161 7 1 1348 255 170 0 0 chr15 100064777 100064824 -3430150 + CT-rich Low_complexity Low_complexity 2 48 0 1 1348 392 226 21 31 chr15 100064902 100064998 -3429976 - PB1D10 SINE Alu 0 117 23 1 1348 261 197 0 0 chr15 100065004 100065075 -3429899 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 1348 263 194 28 56 chr15 100065175 100065246 -3429728 + MTE2a LTR MaLR 311 379 0 1 1348 599 213 0 55 chr15 100065220 100065255 -3429719 + ID_B1 SINE B4 69 223 -1 1 1348 1024 39 8 0 chr15 100065255 100065384 -3429590 + B1_Mur4 SINE Alu 20 149 -1 1 1348 1154 34 7 7 chr15 100065619 100065765 -3429209 - B1_Mm SINE Alu 0 147 2 1 1348 216 0 0 0 chr15 100065810 100065834 -3429140 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 1 1348 30 45 0 0 chr15 100066244 100066288 -3428686 + AT_rich Low_complexity Low_complexity 1 44 0 1 1348 792 198 83 5 chr15 100066348 100066541 -3428433 + B3 SINE B2 4 211 -5 1 1348 818 163 7 13 chr15 100066569 100066718 -3428256 + B1_Mur1 SINE Alu 1 148 -1 1 1348 1433 64 16 0 chr15 100067080 100067267 -3427707 + B2_Mm1t SINE B2 2 191 -2 1 1348 318 200 0 0 chr15 100068466 100068516 -3426458 + RSINE1 SINE B4 3 52 -113 1 1348 462 175 61 10 chr15 100068887 100068985 -3425989 + PB1D9 SINE Alu 5 107 -13 1 1348 3711 181 104 45 chr15 100069427 100070150 -3424824 - Lx9 LINE L1 -291 7353 6572 1 1348 1190 55 0 7 chr15 100070150 100070297 -3424677 - B1_Mus1 SINE Alu 0 148 3 1 1348 3711 181 104 45 chr15 100070297 100070445 -3424529 - Lx9 LINE L1 -1073 6571 6430 1 1348 249 33 0 0 chr15 100070445 100070475 -3424499 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 1 1348 782 130 89 0 chr15 100070490 100070613 -3424361 - B1_Mus1 SINE Alu -1 147 14 1 1348 249 267 120 146 chr15 100070494 100070652 -3424322 - B4 SINE B4 -71 221 68 2 1348 222 235 0 0 chr15 100070756 100070807 -3424167 + T-rich Low_complexity Low_complexity 1 51 0 2 1348 295 130 5 45 chr15 100070811 100070883 -3424091 - B1_Mur4 SINE Alu 0 150 86 2 1348 288 240 103 10 chr15 100071402 100071499 -3423475 - LTR40a LTR ERVL -368 151 46 2 1348 1030 90 13 27 chr15 100071733 100071882 -3423092 - B1_Mus2 SINE Alu 0 147 1 2 1348 261 272 75 28 chr15 100072196 100072302 -3422672 - PB1D9 SINE Alu -8 112 2 2 1348 1143 89 0 0 chr15 100072733 100072879 -3422095 + B1_Mus1 SINE Alu 3 148 0 2 1348 778 117 17 2 chr15 100073037 100073159 -3421815 + B1_Mur2 SINE Alu 13 134 -15 2 1348 1442 64 11 0 chr15 100073588 100073775 -3421199 + B2_Mm1a SINE B2 2 190 -3 2 1348 900 163 211 11 chr15 100073785 100073965 -3421009 + B3 SINE B2 1 216 0 2 1348 717 145 7 71 chr15 100073985 100074126 -3420848 + B1_Mur3 SINE Alu 10 141 -8 2 1348 1419 66 44 0 chr15 100074232 100074414 -3420560 - B2_Mm2 SINE B2 -4 191 2 2 1348 231 301 80 51 chr15 100074672 100074687 -3420287 - B2_Mm2 SINE B2 0 195 181 2 1348 1168 62 7 0 chr15 100074687 100074833 -3420141 - B1_Mus1 SINE Alu 0 148 2 2 1348 231 301 80 51 chr15 100074833 100074992 -3419982 - B2_Mm2 SINE B2 -15 180 17 2 1348 796 173 62 34 chr15 100075129 100075308 -3419666 - B2_Mm2 SINE B2 -11 184 1 2 1348 594 178 139 0 chr15 100075391 100075520 -3419454 - B1_Mm SINE Alu 0 147 1 2 1348 572 174 9 9 chr15 100075911 100076021 -3418953 - PB1D9 SINE Alu -10 110 1 2 1348 482 255 158 18 chr15 100076126 100076236 -3418738 - B3 SINE B2 -15 201 81 2 1348 330 26 0 0 chr15 100076236 100076275 -3418699 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1348 482 255 158 18 chr15 100076275 100076328 -3418646 - B3 SINE B2 -136 80 17 2 1348 2035 136 226 18 chr15 100076869 100077325 -3417649 + RMER4B LTR ERVK 17 567 -18 2 1348 287 191 93 28 chr15 100077388 100077496 -3417478 - RLTR17 LTR ERVK -105 587 473 2 1348 3096 140 38 19 chr15 100077510 100078042 -3416932 - RLTR17 LTR ERVK -137 555 14 2 1348 645 228 106 50 chr15 100078163 100078343 -3416631 - B3A SINE B2 0 198 9 2 1348 1302 143 153 70 chr15 100079237 100079537 -3415437 + ORR1A3 LTR MaLR 2 326 0 2 1348 314 269 25 13 chr15 100079691 100079770 -3415204 + ID4 SINE ID 1 80 -3 2 1348 339 272 111 8 chr15 100079974 100080100 -3414874 - RSINE1 SINE B4 -26 139 1 2 1348 320 256 244 16 chr15 100080395 100080406 -3414568 - B4 SINE B4 -57 235 167 2 1348 555 167 88 0 chr15 100080406 100080508 -3414466 - PB1D9 SINE Alu 0 120 10 2 1348 722 249 80 28 chr15 100080746 100081087 -3413887 - Lx6 LINE L1 -524 7172 6783 2 1348 221 0 0 33 chr15 100081570 100081600 -3413374 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1348 365 191 132 22 chr15 100082223 100082314 -3412660 - PB1D10 SINE Alu -14 103 3 2 1348 277 214 102 45 chr15 100082339 100082427 -3412547 + PB1D7 SINE Alu 4 96 -24 2 1348 261 0 0 0 chr15 100082671 100082700 -3412274 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2 1348 1199 43 0 0 chr15 100082700 100082838 -3412136 - B1_Mus2 SINE Alu -9 138 1 2 1348 270 226 48 16 chr15 100083142 100083205 -3411769 + tRNA-Ala-GCY_ tRNA tRNA 5 69 -6 2 1348 354 289 25 146 chr15 100083396 100083554 -3411420 + ID_B1 SINE B4 82 220 -4 2 1348 757 135 56 0 chr15 100083853 100083979 -3410995 - B1_Mus1 SINE Alu -1 147 15 2 1348 862 17 252 0 chr15 100083980 100084095 -3410879 + B1_Mm SINE Alu 2 145 -2 2 1348 24 0 0 0 chr15 100084277 100084301 -3410673 + AT_rich Low_complexity Low_complexity 1 24 0 2 1348 216 97 0 0 chr15 100084360 100084391 -3410583 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1348 1206 56 0 0 chr15 100085015 100085158 -3409816 + B1_Mus1 SINE Alu 2 144 -4 2 1348 21 0 0 0 chr15 100085161 100085182 -3409792 + AT_rich Low_complexity Low_complexity 1 21 0 2 1348 770 236 75 27 chr15 100085386 100085573 -3409401 + B3 SINE B2 8 203 -13 2 1348 234 278 100 30 chr15 100085745 100085845 -3409129 - Tigger1 DNA MER2_type -545 1873 1767 2 1348 221 176 0 0 chr15 100085848 100085882 -3409092 + B3 SINE B2 1 34 -182 2 1348 561 234 9 0 chr15 100085902 100086013 -3408961 - PB1D9 SINE Alu -8 112 1 2 1348 331 202 38 0 chr15 100086322 100086401 -3408573 - B1_Mus1 SINE Alu -66 82 1 2 1348 243 0 0 0 chr15 100086796 100086823 -3408151 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1348 1109 66 7 0 chr15 100086823 100086959 -3408015 - B1_Mm SINE Alu -8 139 3 2 1348 261 313 77 23 chr15 100087005 100087126 -3407848 + B1F SINE Alu 2 120 0 2 1348 251 242 49 26 chr15 100087151 100087233 -3407741 + B1F SINE Alu 52 135 -14 2 1348 1296 105 5 5 chr15 100087338 100087529 -3407445 - B2_Mm2 SINE B2 -4 191 1 2 1348 266 161 29 101 chr15 100087579 100087648 -3407326 - B1_Mm SINE Alu 0 147 84 2 1348 622 216 129 18 chr15 100088358 100088528 -3406446 + B3 SINE B2 1 189 -27 2 1348 239 280 0 0 chr15 100088616 100088666 -3406308 + PB1D10 SINE Alu 9 58 -59 2 1348 3010 152 138 24 chr15 100088684 100089600 -3405374 - RLTR13D1 LTR ERVK 0 1023 1 2 1348 657 219 119 50 chr15 100089868 100090027 -3404947 - B3A SINE B2 -28 170 1 2 1348 330 315 102 59 chr15 100090052 100090170 -3404804 + PB1D10 SINE Alu 2 124 -3 2 1348 633 61 0 0 chr15 100090713 100090795 -3404179 + (TG)n Simple_repeat Simple_repeat 1 82 0 2 1348 1137 62 7 27 chr15 100092307 100092456 -3402518 + B1_Mus2 SINE Alu 1 146 -1 2 1348 267 227 63 51 chr15 100092671 100092750 -3402224 + PB1D7 SINE Alu 7 86 -34 2 1348 770 178 200 6 chr15 100092766 100092941 -3402033 - B3 SINE B2 -4 212 4 2 1348 716 197 15 22 chr15 100092943 100093078 -3401896 + B1_Mur3 SINE Alu 11 144 -5 2 1348 282 162 77 51 chr15 100093166 100093244 -3401730 + RSINE1 SINE B4 86 165 0 2 1348 21 0 0 0 chr15 100093249 100093270 -3401704 + AT_rich Low_complexity Low_complexity 1 21 0 2 1348 1132 89 71 16 chr15 100093359 100093541 -3401433 + B2_Mm2 SINE B2 1 192 -3 2 1348 482 312 99 0 chr15 100093906 100094047 -3400927 + RSINE1 SINE B4 11 165 0 2 1348 327 202 152 0 chr15 100094229 100094308 -3400666 + PB1D10 SINE Alu 24 114 -3 2 1348 275 29 0 0 chr15 100094310 100094345 -3400629 + RLTRETN_Mm LTR ERVK 1 35 -287 2 1348 6588 92 14 52 chr15 100094345 100095412 -3399562 - MMETn-int LTR ERVK -1250 3594 2569 2 1348 473 255 9 18 chr15 100095515 100095627 -3399347 + MTD LTR MaLR 295 405 -14 2 1348 1369 89 11 5 chr15 100095681 100095872 -3399102 - B2_Mm1a SINE B2 0 193 2 2 1348 231 271 71 20 chr15 100095878 100095976 -3398998 + MLT2B2 LTR ERVL 457 559 -3 2 1348 186 43 0 0 chr15 100096404 100096427 -3398547 + (TC)n Simple_repeat Simple_repeat 2 24 0 2 1348 414 0 0 0 chr15 100096430 100096476 -3398498 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1348 423 0 0 0 chr15 100096476 100096523 -3398451 + (GA)n Simple_repeat Simple_repeat 1 47 0 2 1348 1325 189 127 37 chr15 100096818 100097142 -3397832 - MTD LTR MaLR -8 411 59 2 1348 791 188 0 7 chr15 100097419 100097569 -3397405 + B1_Mur2 SINE Alu 1 149 0 2 1348 360 267 44 0 chr15 100097988 100098078 -3396896 + B3A SINE B2 2 95 -103 2 1348 4433 37 2 8 chr15 100098383 100098897 -3396077 - LTRIS3 LTR ERV1 -1 511 1 2 1348 1312 96 23 0 chr15 100099035 100099212 -3395762 - B2_Mm2 SINE B2 -14 181 1 2 1348 417 86 0 0 chr15 100099260 100099318 -3395656 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 2 1348 2172 149 16 29 chr15 100099395 100099688 -3395286 + MTC LTR MaLR 1 293 -128 2 1348 3778 98 50 11 chr15 100099688 100100233 -3394741 + RMER2 LTR ERV1 1 566 -1 2 1348 2172 149 16 29 chr15 100100233 100100296 -3394678 + MTC LTR MaLR 294 352 -69 2 1348 1928 90 82 16 chr15 100100296 100100611 -3394363 + RLTR9E LTR ERVK 1 336 -73 2 1348 355 171 32 153 chr15 100100625 100100749 -3394225 + ETnERV2-int LTR ERVK 2 110 -3204 2 1348 4536 147 92 33 chr15 100100766 100101900 -3393074 + ETnERV2-int LTR ERVK 108 2083 -5323 2 1348 3434 124 56 0 chr15 100102178 100102736 -3392238 + ETnERV2-int LTR ERVK 3442 4030 -3376 2 1348 270 250 0 27 chr15 100102730 100102804 -3392170 + ETnERV2-int LTR ERVK 4630 4701 -2543 2 1348 349 286 50 66 chr15 100102933 100103131 -3391843 + RLTR46 LTR ERVK 126 320 0 2 1348 3410 197 67 61 chr15 100103131 100103565 -3391409 + MMETn-int LTR ERVK 2310 2592 -2252 2 1348 285 29 0 0 chr15 100103565 100103599 -3391375 + (TTA)n Simple_repeat Simple_repeat 2 35 0 2 1348 1231 41 0 0 chr15 100103599 100103744 -3391230 - B1_Mm SINE Alu -1 146 2 2 1348 3410 191 16 63 chr15 100103744 100104258 -3390716 + MMETn-int LTR ERVK 2593 3085 -1759 2 1348 1492 165 16 25 chr15 100104266 100104654 -3390320 + MMETn-int LTR ERVK 6222 6429 -977 2 1348 400 94 0 59 chr15 100104750 100104818 -3390156 + ETnERV2-int LTR ERVK 6009 6072 -1172 2 1348 1630 136 8 8 chr15 100104831 100105083 -3389891 + ETnERV3-int LTR ERVK 5529 5780 -28 2 1348 1970 187 142 8 chr15 100105090 100105574 -3389400 + RLTR13D6 LTR ERVK 1 549 -353 2 1348 378 68 0 92 chr15 100105574 100105639 -3389335 + ETnERV2-int LTR ERVK 7343 7401 -5 2 1348 1965 130 108 29 chr15 100105644 100106023 -3388951 + RLTR9E LTR ERVK 1 409 0 2 1348 238 167 129 32 chr15 100106023 100106079 -3388895 + MTD LTR MaLR 349 411 -8 2 1348 26 30 0 0 chr15 100106239 100106272 -3388702 + AT_rich Low_complexity Low_complexity 1 33 0 2 1348 867 73 0 0 chr15 100106275 100106385 -3388589 - B2_Mm2 SINE B2 -84 111 2 2 1348 937 206 12 127 chr15 100107033 100107069 -3387905 + B3 SINE B2 1 36 -180 2 1348 1141 69 7 14 chr15 100107069 100107216 -3387758 + B1_Mus1 SINE Alu 1 146 -2 2 1348 937 206 12 127 chr15 100107216 100107423 -3387551 + B3 SINE B2 37 216 0 2 1348 1351 95 11 0 chr15 100107608 100107798 -3387176 + B2_Mm1t SINE B2 2 193 0 2 1348 547 196 0 93 chr15 100108289 100108407 -3386567 + PB1D9 SINE Alu 2 108 -12 2 1348 186 43 0 0 chr15 100108407 100108430 -3386544 + (TAAAA)n Simple_repeat Simple_repeat 4 26 0 2 1348 344 212 484 7 chr15 100108455 100108600 -3386374 + B3 SINE B2 2 215 -1 3 1348 26 0 0 0 chr15 100108639 100108665 -3386309 + AT_rich Low_complexity Low_complexity 1 26 0 3 1348 1193 36 0 0 chr15 100108670 100108808 -3386166 + B1_Mm SINE Alu 1 138 -9 3 1348 243 0 0 0 chr15 100108808 100108835 -3386139 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1348 1228 55 0 0 chr15 100108846 100108992 -3385982 + B1_Mus1 SINE Alu 1 146 -2 3 1348 223 26 77 0 chr15 100108997 100109036 -3385938 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 3 1348 253 236 81 27 chr15 100109312 100109386 -3385588 + B4A SINE B4 14 91 -201 3 1348 195 42 0 0 chr15 100109479 100109503 -3385471 + (TTTC)n Simple_repeat Simple_repeat 1 24 0 3 1348 655 217 39 6 chr15 100109514 100109691 -3385283 + B3 SINE B2 1 193 -2 3 1348 4190 53 14 4 chr15 100110034 100110541 -3384433 + RLTR1B LTR ERV1 1 512 0 3 1348 473 211 28 19 chr15 100110563 100110669 -3384305 + RLTR23 LTR ERV1 324 430 0 3 1348 189 0 0 0 chr15 100110785 100110806 -3384168 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1348 544 130 30 10 chr15 100110831 100110932 -3384042 - PB1D9 SINE Alu -1 119 17 3 1348 339 269 19 37 chr15 100110868 100110976 -3383998 - B4A SINE B4 -125 167 62 3 1348 477 0 0 0 chr15 100111674 100111727 -3383247 + (TAA)n Simple_repeat Simple_repeat 3 55 0 3 1348 395 283 4 0 chr15 100111898 100111998 -3382976 - PB1D10 SINE Alu -8 112 10 3 1348 672 187 29 29 chr15 100112005 100112143 -3382831 + B1_Mm SINE Alu 9 146 -1 3 1348 1414 79 21 0 chr15 100112189 100112379 -3382595 - B2_Mm2 SINE B2 0 195 2 3 1348 1390 89 5 10 chr15 100113107 100113300 -3381674 - B2_Mm1t SINE B2 0 193 2 3 1348 668 228 115 11 chr15 100113462 100113653 -3381321 - B3 SINE B2 -4 212 2 3 1348 180 77 0 0 chr15 100113683 100113709 -3381265 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 1348 257 257 127 14 chr15 100114033 100114104 -3380870 - ID SINE ID -143 81 3 3 1348 839 259 125 18 chr15 100114207 100114479 -3380495 + MTE2b LTR MaLR 67 367 -12 3 1348 315 0 0 0 chr15 100114543 100114578 -3380396 + (CAA)n Simple_repeat Simple_repeat 2 36 0 3 1348 785 242 79 0 chr15 100114700 100114878 -3380096 + B3 SINE B2 1 192 -24 3 1348 238 338 14 14 chr15 100115938 100116010 -3378964 - ID SINE ID -151 73 2 3 1348 180 200 0 0 chr15 100116455 100116510 -3378464 + C-rich Low_complexity Low_complexity 1 55 0 3 1348 440 250 86 35 chr15 100116603 100116719 -3378255 + ID_B1 SINE B4 93 214 -10 3 1348 1144 59 0 0 chr15 100116906 100117041 -3377933 + B1_Mm SINE Alu 4 138 -9 3 1348 189 0 0 0 chr15 100117041 100117062 -3377912 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 3 1348 259 207 190 0 chr15 100117105 100117163 -3377811 - ID_B1 SINE B4 -2 222 154 3 1348 370 235 12 36 chr15 100117167 100117251 -3377723 + PB1D9 SINE Alu 2 83 -37 3 1348 201 39 0 0 chr15 100117297 100117323 -3377651 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 1348 1209 48 7 0 chr15 100117334 100117480 -3377494 - B1_Mus1 SINE Alu 0 148 2 3 1348 1214 74 0 0 chr15 100117595 100117743 -3377231 - B1_Mus1 SINE Alu 0 148 1 3 1348 695 197 40 90 chr15 100117747 100117780 -3377194 - B2_Mm1t SINE B2 -1 192 166 3 1348 192 77 0 0 chr15 100117780 100117806 -3377168 + (ATTG)n Simple_repeat Simple_repeat 1 26 0 3 1348 798 161 0 72 chr15 100117806 100117973 -3377001 - B2_Mm2 SINE B2 -39 156 2 3 1348 678 153 49 49 chr15 100118074 100118218 -3376756 + B1_Mur1 SINE Alu 5 148 -1 3 1348 189 0 0 0 chr15 100118448 100118469 -3376505 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 1348 954 190 14 71 chr15 100118513 100118723 -3376251 + B3 SINE B2 11 208 -8 3 1348 264 277 29 29 chr15 100119072 100119176 -3375798 + L1MB8 LINE L1 5863 5966 -212 3 1348 248 226 57 0 chr15 100119297 100119350 -3375624 - PB1D7 SINE Alu 0 120 65 3 1348 784 275 26 21 chr15 100119303 100119496 -3375478 - ID_B1 SINE B4 -6 218 25 3 1348 337 250 0 0 chr15 100119511 100119583 -3375391 - PB1D7 SINE Alu 0 120 49 3 1348 279 0 0 0 chr15 100120061 100120092 -3374882 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1348 927 143 7 0 chr15 100120093 100120233 -3374741 - B1_Mus1 SINE Alu -7 141 1 3 1348 516 32 0 0 chr15 100120273 100120335 -3374639 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 1348 1040 101 0 26 chr15 100120335 100120488 -3374486 - B3 SINE B2 -67 149 1 3 1348 307 298 121 30 chr15 100120632 100120864 -3374110 + B4A SINE B4 2 254 -38 3 1348 242 216 0 73 chr15 100120897 100120952 -3374022 + B4A SINE B4 242 292 0 3 1348 265 193 35 0 chr15 100121452 100121509 -3373465 - ID4 SINE ID -10 73 15 3 1348 538 157 56 0 chr15 100121526 100121634 -3373340 - PB1D9 SINE Alu -6 114 1 3 1348 860 168 207 0 chr15 100123509 100123688 -3371286 - B3 SINE B2 0 216 1 3 1348 482 321 0 0 chr15 100123956 100124065 -3370909 - PB1D10 SINE Alu -8 109 1 3 1348 327 352 0 54 chr15 100123971 100124082 -3370892 - ID_B1 SINE B4 -49 175 71 3 1348 466 271 150 44 chr15 100124292 100124440 -3370534 + L1M2 LINE L1 2162 2325 -4524 3 1348 1123 69 21 0 chr15 100124440 100124585 -3370389 + B1_Mus1 SINE Alu 1 148 0 3 1348 466 271 150 44 chr15 100124585 100124730 -3370244 + L1M2 LINE L1 2326 2486 -4363 3 1348 217 243 55 0 chr15 100124748 100124819 -3370155 + BC1_Mm scRNA scRNA 5 80 -3 3 1348 536 33 76 11 chr15 100124861 100124953 -3370021 + (GAAAA)n Simple_repeat Simple_repeat 3 100 0 3 1348 23 0 0 0 chr15 100125224 100125247 -3369727 + AT_rich Low_complexity Low_complexity 1 23 0 3 1348 3688 174 71 81 chr15 100125319 100125597 -3369377 + RMER17B LTR ERVK 1 297 -661 3 1348 1611 27 27 0 chr15 100125597 100125782 -3369192 + B2_Mm1t SINE B2 1 190 -3 3 1348 3688 174 71 81 chr15 100125782 100126470 -3368504 + RMER17B LTR ERVK 298 958 0 3 1348 397 257 38 9 chr15 100126495 100126601 -3368373 - PB1D10 SINE Alu -7 110 2 3 1348 629 221 56 14 chr15 100126733 100126875 -3368099 + RSINE1 SINE B4 3 150 -15 3 1348 369 0 0 0 chr15 100126884 100126925 -3368049 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1348 302 304 0 37 chr15 100126963 100127045 -3367929 + B3A SINE B2 101 179 -19 3 1348 1276 90 51 0 chr15 100127101 100127278 -3367696 + B2_Mm2 SINE B2 2 187 -8 3 1348 28 71 0 0 chr15 100127280 100127336 -3367638 + AT_rich Low_complexity Low_complexity 1 56 0 3 1348 381 277 12 0 chr15 100127436 100127519 -3367455 + B4 SINE B4 2 85 -207 3 1348 284 48 24 0 chr15 100128342 100128384 -3366590 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1348 1549 171 42 112 chr15 100128475 100128876 -3366098 + ORR1D1 LTR MaLR 1 373 -1 3 1348 654 267 117 5 chr15 100129124 100129312 -3365662 + ID_B1 SINE B4 14 222 -2 3 1348 248 234 0 0 chr15 100129396 100129443 -3365531 + RSINE1 SINE B4 91 137 -28 3 1348 252 203 35 139 chr15 100129441 100129480 -3365494 + ORR1D2 LTR MaLR 26 59 -311 3 1348 3330 56 2 0 chr15 100129480 100129876 -3365098 - MTB LTR MaLR -3 397 1 3 1348 252 203 35 139 chr15 100129876 100129922 -3365052 + ORR1D2 LTR MaLR 60 102 -268 3 1348 527 252 36 9 chr15 100129928 100130040 -3364934 + B1_Mur2 SINE Alu 7 121 -28 3 1348 762 226 50 43 chr15 100130044 100130280 -3364694 + ORR1D2 LTR MaLR 115 370 0 3 1348 234 260 0 0 chr15 100130308 100130381 -3364593 + (CA)n Simple_repeat Simple_repeat 1 73 0 3 1348 627 186 55 35 chr15 100130446 100130591 -3364383 - B1F2 SINE Alu 0 149 2 3 1348 1250 41 0 0 chr15 100131384 100131531 -3363443 + B1_Mm SINE Alu 1 147 0 3 1348 24 32 0 0 chr15 100131531 100131562 -3363412 + AT_rich Low_complexity Low_complexity 1 31 0 3 1348 691 203 219 6 chr15 100131572 100131750 -3363224 + B3 SINE B2 1 216 0 3 1348 744 181 75 0 chr15 100131771 100131904 -3363070 + B1_Mur2 SINE Alu 7 149 0 3 1348 197 230 14 0 chr15 100132466 100132540 -3362434 + GA-rich Low_complexity Low_complexity 3 77 0 3 1348 189 0 0 0 chr15 100132669 100132690 -3362284 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1348 184 30 61 0 chr15 100132847 100132880 -3362094 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1348 1417 76 5 0 chr15 100132880 100133057 -3361917 - B2_Mm1t SINE B2 -14 179 2 3 1348 227 55 18 53 chr15 100133065 100133122 -3361852 + (TTTTTG)n Simple_repeat Simple_repeat 3 57 0 3 1348 22 0 0 0 chr15 100133274 100133296 -3361678 + AT_rich Low_complexity Low_complexity 1 22 0 3 1348 775 94 0 0 chr15 100133298 100133404 -3361570 + B2_Mm2 SINE B2 2 107 -88 3 1348 461 171 92 85 chr15 100133623 100133764 -3361210 - B1_Mm SINE Alu -5 142 1 3 1348 268 274 63 45 chr15 100134345 100134456 -3360518 + PB1D10 SINE Alu 1 113 -4 3 1348 261 0 0 0 chr15 100135129 100135158 -3359816 + (C)n Simple_repeat Simple_repeat 1 29 0 3 1348 198 0 0 0 chr15 100135855 100135877 -3359097 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 1348 293 189 20 109 chr15 100136084 100136185 -3358789 + PB1D9 SINE Alu 27 118 -2 3 1348 195 42 0 0 chr15 100136510 100136534 -3358440 + (TC)n Simple_repeat Simple_repeat 2 25 0 3 1348 1191 77 65 6 chr15 100136535 100136705 -3358269 - B2_Mm2 SINE B2 -15 180 1 3 1348 320 259 65 97 chr15 100136830 100136984 -3357990 + B1F SINE Alu 1 149 0 3 1348 674 191 4 0 chr15 100137345 100137589 -3357385 + (CA)n Simple_repeat Simple_repeat 1 245 0 3 1348 315 0 0 0 chr15 100137629 100137664 -3357310 + HAL1-3A_ME LINE L1 1977 2011 -847 3 1348 225 297 74 86 chr15 100137752 100137815 -3357159 + ID SINE ID 20 80 -144 3 1348 247 321 8 97 chr15 100137815 100137939 -3357035 + PB1D10 SINE Alu 3 115 -2 4 1348 609 176 10 0 chr15 100138265 100138367 -3356607 - B2_Mm1t SINE B2 -14 179 77 4 1348 994 106 112 0 chr15 100138586 100138746 -3356228 - B2_Mm1t SINE B2 -14 179 2 4 1349 2161 118 31 17 chr15 100139214 100139568 -3355406 + RLTR22_Mur LTR ERVK 1 359 -1489 4 1349 911 82 264 7 chr15 100139568 100139716 -3355258 - B2_Mm2 SINE B2 -9 186 1 4 1349 5467 172 95 9 chr15 100139716 100140119 -3354855 + RLTR22_Mur LTR ERVK 648 1116 -732 4 1349 243 0 0 0 chr15 100140119 100140146 -3354828 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 4 1349 5467 172 95 9 chr15 100140146 100140346 -3354628 + RLTR22_Mur LTR ERVK 1117 1326 -522 4 1349 276 30 0 0 chr15 100140346 100140379 -3354595 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1349 5467 172 95 9 chr15 100140379 100140878 -3354096 + RLTR22_Mur LTR ERVK 1327 1846 -2 4 1349 493 227 51 102 chr15 100140890 100141047 -3353927 + B1F SINE Alu 1 149 0 4 1349 591 15 0 0 chr15 100141132 100141200 -3353774 + (TC)n Simple_repeat Simple_repeat 2 69 0 4 1349 211 284 80 50 chr15 100141286 100141386 -3353588 - PB1D10 SINE Alu -14 103 1 4 1349 662 250 41 25 chr15 100141556 100141746 -3353228 - B4 SINE B4 -4 288 92 4 1349 220 143 0 169 chr15 100141778 100141837 -3353137 + PB1D10 SINE Alu 62 110 -7 4 1349 230 308 58 33 chr15 100141885 100142006 -3352968 + L1M5 LINE L1 5515 5638 -486 4 1349 626 225 0 0 chr15 100142375 100142495 -3352479 - ID_B1 SINE B4 -1 223 104 4 1349 566 185 92 43 chr15 100142653 100142794 -3352180 + B1_Mur2 SINE Alu 2 149 0 4 1349 598 197 38 15 chr15 100142826 100142962 -3352012 - B1F SINE Alu -2 147 9 4 1349 291 272 48 19 chr15 100143130 100143235 -3351739 - PB1D10 SINE Alu -9 108 1 4 1349 540 196 37 112 chr15 100144381 100144570 -3350404 + B1_Mur3 SINE Alu 5 149 0 4 1349 846 267 92 60 chr15 100144909 100144942 -3350032 - ORR1E LTR MaLR -10 349 316 4 1349 2295 107 121 18 chr15 100144942 100145323 -3349651 + RLTR9B2 LTR ERVK 1 420 0 4 1349 846 267 92 60 chr15 100145323 100145624 -3349350 - ORR1E LTR MaLR -44 315 4 4 1349 248 286 16 0 chr15 100145731 100145794 -3349180 - ID4_ SINE ID -6 77 14 4 1349 599 174 18 0 chr15 100145831 100145940 -3349034 - PB1D9 SINE Alu -5 115 5 4 1349 532 209 81 50 chr15 100146285 100146506 -3348468 - RMER3D-int LTR ERVK -2033 809 582 4 1349 418 228 66 61 chr15 100146448 100146644 -3348330 + RMER3D-int LTR ERVK 387 583 -2259 4 1349 2975 147 86 4 chr15 100146645 100147156 -3347818 + RLTR17 LTR ERVK 140 692 0 4 1349 286 222 226 32 chr15 100147191 100147284 -3347690 - B4A SINE B4 -180 112 2 4 1349 523 246 103 21 chr15 100147285 100147430 -3347544 + MER34 LTR ERV1 386 542 0 4 1349 200 228 198 25 chr15 100147446 100147527 -3347447 + MIRb SINE MIR 93 187 -81 4 1349 590 171 61 3 chr15 100147534 100147647 -3347327 + B1_Mur2 SINE Alu 2 118 -2 4 1349 413 266 0 0 chr15 100147694 100147788 -3347186 - PB1D10 SINE Alu -17 100 7 4 1349 243 167 74 0 chr15 100147866 100147920 -3347054 - ID4_ SINE ID 0 83 26 4 1349 577 118 0 0 chr15 100147917 100148002 -3346972 - BC1_Mm scRNA scRNA -67 85 1 4 1349 587 221 143 29 chr15 100148341 100148481 -3346493 + RSINE1 SINE B4 8 163 -2 4 1349 249 150 0 0 chr15 100148545 100148585 -3346389 + PB1 SINE Alu 83 122 -5 4 1349 284 321 26 35 chr15 100149281 100149394 -3345580 + B1F SINE Alu 18 129 -20 4 1349 229 286 0 0 chr15 100149575 100149631 -3345343 + PB1D10 SINE Alu 33 88 -29 4 1349 593 228 21 35 chr15 100149953 100150094 -3344880 - B3 SINE B2 -77 139 1 4 1349 1064 102 7 0 chr15 100150116 100150263 -3344711 + B1_Mur4 SINE Alu 2 149 -1 4 1349 310 225 53 63 chr15 100150270 100150365 -3344609 + L1MDa LINE L1 2446 2539 -4094 4 1349 921 141 37 0 chr15 100151171 100151306 -3343668 - B1_Mur3 SINE Alu -1 148 9 4 1349 426 291 8 8 chr15 100151695 100151823 -3343151 - RSINE1 SINE B4 -25 140 13 4 1349 1333 47 9 0 chr15 100152069 100152303 -3342671 + (TCTA)n Simple_repeat Simple_repeat 1 236 0 4 1349 705 182 47 16 chr15 100152304 100152432 -3342542 - B1_Mus2 SINE Alu -7 140 9 4 1349 360 164 0 0 chr15 100152502 100152569 -3342405 + (TA)n Simple_repeat Simple_repeat 1 67 0 4 1349 406 163 60 16 chr15 100152571 100152669 -3342305 - B4A SINE B4 -71 221 109 4 1349 232 333 69 0 chr15 100152948 100153050 -3341924 - RLTR47_MM LTR ERV1 -311 221 113 4 1349 769 212 98 21 chr15 100153129 100153322 -3341652 - B3 SINE B2 -8 208 1 4 1349 756 182 22 7 chr15 100153427 100153565 -3341409 + B1_Mur2 SINE Alu 2 141 -8 4 1349 207 167 0 0 chr15 100153565 100153607 -3341367 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 4 1349 1335 73 16 22 chr15 100153732 100153914 -3341060 - B2_Mm2 SINE B2 -14 181 1 4 1349 765 209 52 73 chr15 100154117 100154289 -3340685 + B3 SINE B2 3 176 -40 4 1349 333 0 0 0 chr15 100154289 100154326 -3340648 + (CAA)n Simple_repeat Simple_repeat 2 38 0 4 1349 765 209 52 73 chr15 100154326 100154344 -3340630 + B3 SINE B2 177 189 -27 4 1349 900 134 0 7 chr15 100155249 100155384 -3339590 + B1_Mus1 SINE Alu 3 136 -12 4 1349 3096 39 28 18 chr15 100155384 100155772 -3339202 - MTA_Mm LTR MaLR -4 392 1 4 1349 940 214 71 0 chr15 100155908 100156104 -3338870 + B3 SINE B2 2 211 -5 4 1349 1373 85 16 0 chr15 100156248 100156436 -3338538 + B2_Mm2 SINE B2 2 192 -3 4 1349 924 239 34 10 chr15 100157112 100157319 -3337655 + B3 SINE B2 5 216 0 4 1349 1194 114 17 0 chr15 100157428 100157603 -3337371 + B2_Mm1t SINE B2 2 179 -14 4 1349 301 130 0 85 chr15 100157650 100157709 -3337265 + B2_Mm2 SINE B2 47 100 -95 4 1349 774 42 0 0 chr15 100157774 100157869 -3337105 + BC1_Mm scRNA scRNA 1 95 -57 4 1349 1474 58 16 5 chr15 100157888 100158077 -3336897 + B2_Mm2 SINE B2 1 191 -4 4 1349 6246 112 45 24 chr15 100158139 100159150 -3335824 + RMER17A-int LTR ERVK 695 1726 -2 4 1349 601 261 90 42 chr15 100159304 100159331 -3335643 + ID SINE ID 2 29 -195 4 1349 2843 48 65 31 chr15 100159331 100159714 -3335260 - MTA_Mm LTR MaLR 0 396 1 4 1349 601 261 90 42 chr15 100159714 100159898 -3335076 + ID_B1 SINE B4 30 223 -1 4 1349 465 200 10 31 chr15 100160440 100160538 -3334436 - B1F2 SINE Alu -1 148 53 4 1349 1110 37 0 0 chr15 100160558 100160693 -3334281 - B1_Mus1 SINE Alu 0 148 14 4 1349 241 244 76 13 chr15 100160789 100160868 -3334106 - L1M5 LINE L1 -456 5668 5585 4 1349 465 250 57 42 chr15 100160900 100161106 -3333868 - B3A SINE B2 -2 214 8 4 1349 207 0 0 0 chr15 100161134 100161157 -3333817 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 1349 198 0 0 0 chr15 100161157 100161178 -3333796 + (GA)n Simple_repeat Simple_repeat 1 22 0 4 1349 331 217 32 168 chr15 100161189 100161344 -3333630 - RSINE1 SINE B4 -31 134 1 4 1349 303 259 96 58 chr15 100161563 100161627 -3333347 + L1M4b LINE L1 2173 2230 -5104 4 1349 1151 74 0 13 chr15 100161627 100161777 -3333197 + B1_Mus1 SINE Alu 1 148 0 4 1349 303 259 96 58 chr15 100161777 100161868 -3333106 + L1M4b LINE L1 2231 2333 -5001 4 1349 204 125 0 0 chr15 100161923 100161955 -3333019 + (TATATG)n Simple_repeat Simple_repeat 2 33 0 4 1349 270 116 0 0 chr15 100161959 100162002 -3332972 + (CATA)n Simple_repeat Simple_repeat 2 44 0 4 1349 315 358 82 22 chr15 100162767 100162950 -3332024 + MER20 DNA MER1_type 19 212 -7 4 1349 201 269 0 0 chr15 100163409 100163476 -3331498 + (TA)n Simple_repeat Simple_repeat 1 67 0 4 1349 286 113 54 54 chr15 100163483 100163539 -3331435 + ERVL-E-int LTR ERVL 1777 1832 -3835 4 1349 373 288 93 0 chr15 100163941 100164080 -3330894 + ERVL-E-int LTR ERVL 2084 2235 -3432 4 1349 318 67 0 0 chr15 100164640 100164685 -3330289 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1349 180 152 0 0 chr15 100165154 100165187 -3329787 + (GGGTG)n Simple_repeat Simple_repeat 4 36 0 4 1349 216 0 0 0 chr15 100165218 100165242 -3329732 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 4 1349 555 159 26 26 chr15 100166148 100166264 -3328710 + B1_Mur1 SINE Alu 32 147 -2 4 1349 231 36 0 0 chr15 100166592 100166620 -3328354 + (TC)n Simple_repeat Simple_repeat 2 29 0 4 1349 1144 105 41 0 chr15 100166620 100166792 -3328182 - B2_Mm2 SINE B2 -14 181 3 4 1349 320 258 70 77 chr15 100166903 100167046 -3327928 + B1F SINE Alu 7 148 -1 4 1349 1624 32 5 0 chr15 100167072 100167258 -3327716 + B2_Mm1t SINE B2 2 188 -5 4 1349 605 197 4 0 chr15 100167577 100167814 -3327160 + (CA)n Simple_repeat Simple_repeat 1 237 0 4 1349 236 297 74 86 chr15 100167900 100167963 -3327011 + ID SINE ID 20 80 -144 4 1349 256 297 34 51 chr15 100167963 100168087 -3326887 + B1F2 SINE Alu 3 115 -2 4 1349 604 186 10 0 chr15 100168413 100168515 -3326459 - B2_Mm1t SINE B2 -14 179 77 4 1349 1143 68 106 0 chr15 100168734 100168895 -3326079 - B2_Mm1t SINE B2 -14 179 2 4 1349 515 213 41 16 chr15 100169010 100169146 -3325828 - B1F SINE Alu -2 147 9 4 1349 23 33 0 0 chr15 100169328 100169358 -3325616 + AT_rich Low_complexity Low_complexity 1 30 0 4 1349 359 276 11 0 chr15 100169379 100169466 -3325508 - PB1D10 SINE Alu -29 88 1 4 1349 231 235 0 38 chr15 100170561 100170614 -3324360 - ID4_ SINE ID -11 72 22 4 1349 1310 44 0 0 chr15 100170614 100170772 -3324202 + B2_Mm1a SINE B2 1 158 -35 4 1349 468 0 0 0 chr15 100170772 100170824 -3324150 + (TAA)n Simple_repeat Simple_repeat 3 54 0 4 1349 288 268 8 118 chr15 100170853 100170980 -3323994 - MT2B LTR ERVL -313 288 176 4 1349 655 130 18 18 chr15 100170878 100170988 -3323986 - PB1D9 SINE Alu -5 115 6 4 1349 469 247 0 0 chr15 100171057 100171150 -3323824 - PB1D10 SINE Alu -17 100 8 4 1349 238 167 74 0 chr15 100171230 100171284 -3323690 - ID4_ SINE ID 0 83 26 4 1349 581 118 54 0 chr15 100171280 100171373 -3323601 - BC1_Mm scRNA scRNA -54 98 1 5 1349 548 206 138 62 chr15 100171672 100171817 -3323157 + RSINE1 SINE B4 4 159 -6 5 1349 251 181 12 0 chr15 100171862 100171923 -3323051 + PB1D9 SINE Alu 75 142 -8 5 1349 246 339 26 35 chr15 100172633 100172746 -3322228 + B1F SINE Alu 18 129 -20 5 1349 215 286 54 0 chr15 100172932 100172988 -3321986 + B1F2 SINE Alu 33 91 -58 5 1349 3306 35 2 39 chr15 100172997 100173408 -3321566 + MTA_Mm LTR MaLR 1 396 0 5 1349 1164 125 11 6 chr15 100174084 100174261 -3320713 + B2_Mm1t SINE B2 2 179 -14 5 1349 335 103 324 45 chr15 100174308 100174419 -3320555 + B2_Mm2 SINE B2 47 188 -7 5 1349 1429 65 22 0 chr15 100174438 100174623 -3320351 + B2_Mm2 SINE B2 1 189 -6 5 1349 505 239 8 22 chr15 100174845 100174973 -3320001 + PB1D9 SINE Alu 2 120 0 5 1349 1361 85 23 0 chr15 100175079 100175256 -3319718 + B2_Mm2 SINE B2 1 181 -14 5 1349 1242 35 0 7 chr15 100175273 100175418 -3319556 - B1_Mm SINE Alu 0 147 4 5 1349 279 113 345 25 chr15 100175439 100175549 -3319425 + B2_Mm2 SINE B2 46 189 -6 5 1349 406 240 411 6 chr15 100175593 100175746 -3319228 + B3A SINE B2 2 216 0 5 1349 4241 119 16 70 chr15 100175920 100176714 -3318260 + RMER17A LTR ERVK 1 751 0 5 1349 7012 161 58 74 chr15 100176716 100176953 -3318021 + RMER17A-int LTR ERVK 3 248 -1480 5 1349 189 0 0 0 chr15 100176953 100176974 -3318000 + (CCCCCA)n Simple_repeat Simple_repeat 3 23 0 5 1349 7012 161 58 74 chr15 100176974 100178488 -3316486 + RMER17A-int LTR ERVK 249 1726 -2 5 1349 2112 149 30 50 chr15 100178490 100178808 -3316166 + RMER17A LTR ERVK 1 407 -344 5 1349 879 99 35 0 chr15 100178808 100178980 -3315994 + (TC)n Simple_repeat Simple_repeat 2 179 0 5 1349 2112 153 18 28 chr15 100178980 100179324 -3315650 + RMER17A LTR ERVK 408 751 0 5 1349 621 261 0 7 chr15 100179689 100179828 -3315146 - B1_Mur4 SINE Alu -7 143 6 5 1349 347 216 39 39 chr15 100179903 100179980 -3314994 - B3A SINE B2 -121 77 1 5 1349 353 335 6 23 chr15 100180707 100180878 -3314096 + (CA)n Simple_repeat Simple_repeat 1 168 0 5 1349 1208 118 0 31 chr15 100181430 100181623 -3313351 - B2_Mm2 SINE B2 -8 187 1 5 1349 326 305 102 8 chr15 100182626 100182751 -3312223 + L1MC4a LINE L1 7543 7673 -369 5 1349 240 35 0 0 chr15 100183503 100183532 -3311442 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1349 546 168 26 26 chr15 100184435 100184551 -3310423 + B1_Mur1 SINE Alu 32 147 -2 5 1349 1173 82 0 0 chr15 100184763 100184910 -3310064 + B1_Mus2 SINE Alu 1 147 0 5 1349 660 135 48 0 chr15 100184971 100185075 -3309899 - B2_Mm1t SINE B2 -14 179 71 5 1349 275 186 0 33 chr15 100185052 100185113 -3309861 + B2_Mm2 SINE B2 21 79 -116 5 1349 1143 68 106 0 chr15 100185302 100185463 -3309511 - B2_Mm1t SINE B2 -14 179 2 5 1349 8349 162 45 104 chr15 100185897 100186695 -3308279 + RLTR22_Mur LTR ERVK 1 653 -1195 5 1349 1555 47 0 25 chr15 100186695 100186891 -3308083 - B2_Mm2 SINE B2 -4 191 1 5 1349 8349 162 45 104 chr15 100186891 100186940 -3308034 + RLTR22_Mur LTR ERVK 654 696 -1152 5 1349 1507 33 61 0 chr15 100186940 100187121 -3307853 - B2_Mm1a SINE B2 0 193 2 5 1349 8349 162 45 104 chr15 100187121 100187374 -3307600 + RLTR22_Mur LTR ERVK 697 999 -849 5 1349 1702 21 0 0 chr15 100187374 100187563 -3307411 + B2_Mm1a SINE B2 2 190 -3 5 1349 8349 162 45 104 chr15 100187563 100188424 -3306550 + RLTR22_Mur LTR ERVK 1000 1848 0 5 1349 499 218 47 107 chr15 100188436 100188585 -3306389 + B1F SINE Alu 1 140 -9 5 1349 657 25 0 0 chr15 100188677 100188756 -3306218 + (TC)n Simple_repeat Simple_repeat 2 80 0 5 1349 261 248 27 171 chr15 100188756 100188902 -3306072 - ID_B1 SINE B4 -12 212 88 5 1349 214 232 53 18 chr15 100188851 100188908 -3306066 - PB1D7 SINE Alu -61 59 1 5 1349 701 251 41 25 chr15 100189083 100189274 -3305700 - B4 SINE B4 -4 288 92 5 1349 221 156 22 22 chr15 100189318 100189364 -3305610 + PB1D7 SINE Alu 68 113 -7 5 1349 399 321 88 54 chr15 100189412 100189672 -3305302 + L1M5 LINE L1 5515 5783 -341 5 1349 229 192 205 0 chr15 100189780 100189858 -3305116 - B3 SINE B2 -32 184 91 5 1349 584 250 28 26 chr15 100189858 100190008 -3304966 - ID_B1 SINE B4 -52 240 93 5 1349 404 208 88 122 chr15 100190163 100190311 -3304663 + B1_Mur2 SINE Alu 2 144 -5 5 1349 378 229 45 143 chr15 100190351 100190463 -3304511 - B1F SINE Alu -2 147 18 5 1349 23 33 0 0 chr15 100190654 100190684 -3304290 + AT_rich Low_complexity Low_complexity 1 30 0 5 1349 359 276 11 0 chr15 100190705 100190792 -3304182 - PB1D10 SINE Alu -29 88 1 5 1349 705 157 59 7 chr15 100191928 100192063 -3302911 + B1_Mur4 SINE Alu 3 144 -6 5 1349 844 282 90 48 chr15 100192396 100192728 -3302246 - ORR1E LTR MaLR -10 349 4 5 1349 256 270 16 0 chr15 100192829 100192892 -3302082 - ID4_ SINE ID -6 77 14 5 1349 281 297 0 106 chr15 100192904 100193036 -3301938 - MT2B LTR ERVL -313 288 171 5 1349 635 139 18 18 chr15 100192929 100193039 -3301935 - PB1D9 SINE Alu -5 115 6 5 1349 469 247 0 0 chr15 100193108 100193201 -3301773 - PB1D10 SINE Alu -17 100 8 5 1349 238 167 74 0 chr15 100193285 100193339 -3301635 - ID4_ SINE ID 0 83 26 5 1349 602 105 0 0 chr15 100193336 100193422 -3301552 - BC1_Mm scRNA scRNA -66 86 1 5 1349 572 228 143 29 chr15 100193729 100193869 -3301105 + RSINE1 SINE B4 8 163 -2 5 1349 251 181 12 0 chr15 100193910 100193971 -3301003 + PB1D9 SINE Alu 75 142 -8 5 1349 213 259 18 18 chr15 100194367 100194422 -3300552 - ID SINE ID -166 58 4 5 1349 743 116 137 15 chr15 100194682 100194813 -3300161 + B1_Mus1 SINE Alu 1 147 -1 5 1349 704 259 0 20 chr15 100195988 100196138 -3298836 - RSINE1 SINE B4 -16 149 3 5 1349 561 262 101 24 chr15 100196345 100196552 -3298422 + ID_B1 SINE B4 1 223 -1 5 1349 483 192 32 30 chr15 100197089 100197210 -3297764 - B1F2 SINE Alu -1 148 16 5 1349 225 275 38 0 chr15 100197299 100197379 -3297595 - L1M5 LINE L1 -456 5668 5586 5 1349 416 249 99 63 chr15 100197417 100197618 -3297356 - B3A SINE B2 -7 209 8 5 1349 216 0 0 0 chr15 100197649 100197673 -3297301 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 1349 306 0 0 0 chr15 100197673 100197706 -3297268 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 1349 364 240 32 168 chr15 100197717 100197872 -3297102 - RSINE1 SINE B4 -31 134 1 5 1349 225 252 92 0 chr15 100198149 100198268 -3296706 + ORR1B1-int LTR MaLR 625 754 -755 5 1349 1031 99 0 0 chr15 100198167 100198308 -3296666 + B1_Mus1 SINE Alu 8 148 0 5 1349 185 0 40 0 chr15 100198316 100198341 -3296633 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 5 1349 249 273 0 0 chr15 100198447 100198524 -3296450 + (TA)n Simple_repeat Simple_repeat 2 78 0 5 1349 1391 228 160 50 chr15 100198582 100199057 -3295917 - RMER4B LTR ERVK -58 527 1 5 1349 295 227 27 0 chr15 100199057 100199132 -3295842 + L1MC LINE L1 4551 4627 -1519 5 1349 795 239 0 12 chr15 100199134 100199299 -3295675 + B4 SINE B4 41 203 -89 5 1349 268 272 27 64 chr15 100199201 100199311 -3295663 + B1F SINE Alu 22 127 -22 5 1349 210 301 12 99 chr15 100199308 100199389 -3295585 + RSINE1 SINE B4 92 165 0 5 1349 344 229 50 50 chr15 100199540 100199641 -3295333 - PB1D10 SINE Alu -2 115 15 5 1349 859 235 50 20 chr15 100199821 100199861 -3295113 - B3 SINE B2 -10 206 169 5 1349 240 86 0 0 chr15 100199861 100199896 -3295078 + (TATG)n Simple_repeat Simple_repeat 4 38 0 5 1349 859 235 50 20 chr15 100199896 100200055 -3294919 - B3 SINE B2 -48 168 2 5 1349 259 363 39 0 chr15 100200283 100200385 -3294589 - RSINE1 SINE B4 -4 161 56 5 1349 499 278 74 34 chr15 100200412 100200561 -3294413 - RSINE1 SINE B4 0 165 11 5 1349 1277 68 11 0 chr15 100200782 100200958 -3294016 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 5 1349 707 20 40 0 chr15 100201024 100201125 -3293849 + (GA)n Simple_repeat Simple_repeat 2 106 0 5 1349 404 321 18 0 chr15 100201491 100201603 -3293371 - PB1D10 SINE Alu -3 114 1 5 1349 1471 68 16 0 chr15 100201628 100201819 -3293155 - B2_Mm2 SINE B2 -1 194 1 5 1349 297 340 78 23 chr15 100201849 100202105 -3292869 - Tigger12A DNA MER2_type -509 282 13 5 1349 274 254 246 0 chr15 100202141 100202255 -3292719 - B1F SINE Alu -7 142 1 5 1349 319 219 0 27 chr15 100202292 100202367 -3292607 + B4 SINE B4 14 86 -206 5 1349 903 131 0 7 chr15 100203123 100203261 -3291713 - B1_Mus1 SINE Alu -7 141 5 5 1349 959 92 175 12 chr15 100203320 100203486 -3291488 - B2_Mm2 SINE B2 0 195 3 5 1349 316 297 116 67 chr15 100203486 100203847 -3291127 - MMTV-int LTR ERVK -2453 4800 4422 5 1349 1237 166 122 52 chr15 100203924 100204251 -3290723 - RMER12 LTR ERVK -34 1288 980 5 1349 1734 237 98 21 chr15 100204244 100204870 -3290104 - RMER12 LTR ERVK -546 858 1 5 1349 868 183 200 0 chr15 100205106 100205286 -3289688 - B3 SINE B2 0 216 1 5 1349 213 159 0 0 chr15 100205481 100205525 -3289449 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1349 723 234 133 0 chr15 100205602 100205790 -3289184 + B3 SINE B2 1 213 -3 5 1349 973 178 147 0 chr15 100205907 100206104 -3288870 - URR1A DNA MER1_type 0 226 1 5 1349 2269 144 114 5 chr15 100206331 100206709 -3288265 - MTC LTR MaLR 0 421 3 5 1349 365 305 21 0 chr15 100206732 100206827 -3288147 - B1F1 SINE Alu -51 98 2 5 1349 371 269 132 16 chr15 100206841 100206962 -3288012 - B1F SINE Alu -1 148 14 5 1349 221 143 194 0 chr15 100207083 100207181 -3287793 + (CATTG)n Simple_repeat Simple_repeat 3 119 0 5 1349 986 110 21 0 chr15 100207504 100207649 -3287325 + B1_Mus1 SINE Alu 1 148 0 5 1349 319 358 82 22 chr15 100208535 100208718 -3286256 + MER20 DNA MER1_type 19 212 -7 5 1349 201 269 0 0 chr15 100209177 100209244 -3285730 + (TA)n Simple_repeat Simple_repeat 2 68 0 6 1349 225 301 0 57 chr15 100209291 100209379 -3285595 - LTR89 LTR ERVL? -726 153 71 6 1349 343 288 93 0 chr15 100209709 100209848 -3285126 + ERVL-E-int LTR ERVL 2084 2235 -3432 6 1349 313 181 80 60 chr15 100210415 100210515 -3284459 - HAL1-3A_ME LINE L1 -840 2018 1917 6 1349 282 314 8 68 chr15 100210688 100210821 -3284153 - MER21B LTR ERV1 -122 741 617 6 1349 254 208 21 0 chr15 100211175 100211223 -3283751 + ID_B1 SINE B4 160 208 -16 6 1349 404 271 41 0 chr15 100211317 100211439 -3283535 + PB1 SINE Alu 1 127 0 6 1349 274 253 140 65 chr15 100211510 100211603 -3283371 + PB1D10 SINE Alu 15 114 -3 6 1349 307 289 187 13 chr15 100212105 100212340 -3282634 + B4 SINE B4 1 276 -16 6 1349 888 159 0 0 chr15 100212408 100212565 -3282409 + (TG)n Simple_repeat Simple_repeat 1 157 0 6 1349 1034 238 19 5 chr15 100212790 100213001 -3281973 - ID_B1 SINE B4 -10 214 1 6 1349 394 307 31 23 chr15 100213528 100213658 -3281316 - ID_B1 SINE B4 -2 222 92 6 1349 940 157 7 7 chr15 100213679 100213827 -3281147 + B1_Mur3 SINE Alu 1 148 -1 6 1349 516 223 58 0 chr15 100214589 100214710 -3280264 + RSINE1 SINE B4 8 135 -30 6 1349 249 302 116 0 chr15 100214901 100214987 -3279987 + PB1D10 SINE Alu 5 100 -17 6 1349 297 75 0 0 chr15 100215859 100215899 -3279075 + (TGAA)n Simple_repeat Simple_repeat 4 43 0 6 1349 407 234 240 8 chr15 100216178 100216307 -3278667 - B3 SINE B2 -57 159 1 6 1349 350 227 43 14 chr15 100216307 100216413 -3278561 - PB1D10 SINE Alu -2 125 5 6 1349 457 258 68 62 chr15 100216451 100216612 -3278362 - RSINE1 SINE B4 -2 163 2 6 1349 467 198 55 0 chr15 100216640 100216731 -3278243 - B3 SINE B2 -4 212 117 6 1349 341 264 27 134 chr15 100216754 100216903 -3278071 - ID_B1 SINE B4 -58 166 34 6 1349 484 194 42 0 chr15 100217411 100217517 -3277457 + B1_Mur1 SINE Alu 2 111 -38 6 1349 1047 84 151 0 chr15 100217519 100217685 -3277289 + B2_Mm2 SINE B2 2 192 -3 6 1349 881 154 42 0 chr15 100217761 100217904 -3277070 + B1_Mur4 SINE Alu 1 149 -1 6 1349 247 314 51 107 chr15 100217998 100218176 -3276798 - MER102b DNA MER1_type -2 339 172 6 1349 300 148 0 0 chr15 100218218 100218279 -3276695 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 1349 639 282 62 0 chr15 100218682 100218859 -3276115 + B4A SINE B4 20 207 -85 6 1349 474 18 0 0 chr15 100218917 100218972 -3276002 + (CA)n Simple_repeat Simple_repeat 1 55 0 6 1349 300 111 0 0 chr15 100219034 100219079 -3275895 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1349 371 215 176 9 chr15 100219759 100219867 -3275107 - B3 SINE B2 -3 213 88 6 1349 345 312 111 8 chr15 100220343 100220469 -3274505 - ID_B1 SINE B4 0 224 86 6 1349 767 233 14 14 chr15 100220573 100220721 -3274253 - B1_Mur2 SINE Alu -1 148 1 6 1349 355 169 183 0 chr15 100220939 100221010 -3273964 - BC1_Mm scRNA scRNA -68 84 1 6 1349 403 212 141 0 chr15 100221016 100221101 -3273873 - PB1D9 SINE Alu -17 103 7 6 1349 395 266 54 15 chr15 100221649 100221779 -3273195 - B1F1 SINE Alu -14 135 1 6 1349 873 167 0 21 chr15 100222036 100222177 -3272797 + B1_Mus1 SINE Alu 10 147 -1 6 1349 320 195 47 102 chr15 100222211 100222309 -3272665 - B3A SINE B2 -104 112 2 6 1349 289 276 39 39 chr15 100222727 100222855 -3272119 - RSINE1 SINE B4 0 165 38 6 1349 531 207 83 28 chr15 100223803 100223947 -3271027 - URR1A DNA MER1_type 0 226 75 6 1349 739 129 72 92 chr15 100224901 100225054 -3269920 + B1_Mur4 SINE Alu 1 150 0 6 1349 678 238 14 7 chr15 100225296 100225444 -3269530 + B1F1 SINE Alu 1 149 0 6 1349 345 47 0 0 chr15 100225460 100225503 -3269471 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1349 1082 120 21 16 chr15 100226120 100226306 -3268668 - B2_Mm2 SINE B2 -6 189 3 6 1349 320 220 76 0 chr15 100226595 100226727 -3268247 + (TAGA)n Simple_repeat Simple_repeat 2 143 0 6 1349 418 303 8 47 chr15 100226867 100226995 -3267979 - B4A SINE B4 -129 163 41 6 1349 770 208 7 14 chr15 100227121 100227267 -3267707 + B1_Mus2 SINE Alu 1 145 -2 6 1349 693 161 0 24 chr15 100227306 100227433 -3267541 + B1_Mur2 SINE Alu 3 126 -23 6 1349 2282 91 28 0 chr15 100227563 100227881 -3267093 + ORR1A2 LTR MaLR 1 327 0 6 1349 372 261 80 29 chr15 100228467 100228605 -3266369 - RSINE1 SINE B4 -10 155 11 6 1349 596 280 104 90 chr15 100229144 100229509 -3265465 + MTE2a LTR MaLR 1 370 -9 6 1349 626 221 8 198 chr15 100230196 100230421 -3264553 + B3 SINE B2 1 181 -35 6 1349 315 71 0 0 chr15 100230421 100230463 -3264511 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 1349 626 221 8 198 chr15 100230463 100230480 -3264494 + B3 SINE B2 182 197 -19 6 1349 1987 194 51 53 chr15 100230487 100230768 -3264206 + RLTR16 LTR ERVK 1 301 -204 6 1349 1270 34 0 0 chr15 100230768 100230914 -3264060 + B1_Mus2 SINE Alu 2 147 0 6 1349 1987 194 51 53 chr15 100230914 100231138 -3263836 + RLTR16 LTR ERVK 302 505 0 6 1349 234 91 0 0 chr15 100231321 100231354 -3263620 + (CAGA)n Simple_repeat Simple_repeat 3 35 0 6 1349 331 294 37 67 chr15 100231360 100231524 -3263450 - RSINE1 SINE B4 -5 160 2 6 1349 229 284 107 25 chr15 100234737 100234896 -3260078 + MTEb LTR MaLR 206 377 -2 6 1349 409 235 81 32 chr15 100235489 100235612 -3259362 - B1_Mur2 SINE Alu -20 129 1 6 1349 468 319 6 69 chr15 100237223 100237398 -3257576 + B3A SINE B2 2 165 -33 6 1349 213 65 0 0 chr15 100237398 100237429 -3257545 + (CATA)n Simple_repeat Simple_repeat 4 34 0 6 1349 297 282 50 158 chr15 100237429 100237455 -3257519 + B2_Mm2 SINE B2 160 181 -14 6 1349 257 262 50 0 chr15 100237705 100237785 -3257189 + ID_B1 SINE B4 89 172 -52 6 1349 200 59 29 0 chr15 100237822 100237856 -3257118 + (ACTG)n Simple_repeat Simple_repeat 3 37 0 6 1349 942 191 276 3 chr15 100238926 100239220 -3255754 + ORR1D1 LTR MaLR 1 374 0 6 1349 1579 27 5 26 chr15 100239238 100239430 -3255544 + B2_Mm2 SINE B2 1 188 -7 6 1349 1216 83 77 0 chr15 100240029 100240197 -3254777 + B2_Mm2 SINE B2 1 181 -14 6 1349 329 178 0 5 chr15 100240229 100240294 -3254680 + B2_Mm2 SINE B2 47 109 -107 6 1349 216 0 0 0 chr15 100240310 100240334 -3254640 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 6 1349 553 256 76 38 chr15 100240948 100241106 -3253868 - ID_B1 SINE B4 -59 165 2 6 1349 348 223 27 80 chr15 100241168 100241280 -3253694 + PB1D10 SINE Alu 12 117 0 6 1349 268 197 118 66 chr15 100241545 100241621 -3253353 + PB1D10 SINE Alu 37 116 -1 6 1349 483 238 33 0 chr15 100243119 100243241 -3251733 + ID_B1 SINE B4 99 224 0 6 1349 1216 21 43 0 chr15 100243274 100243415 -3251559 + B1_Mus2 SINE Alu 1 147 0 6 1349 1002 9 0 0 chr15 100244075 100244190 -3250784 + (GGGAGA)n Simple_repeat Simple_repeat 2 116 0 6 1349 766 147 88 0 chr15 100244288 100244424 -3250550 - B1_Mus1 SINE Alu 0 148 1 6 1349 640 242 11 75 chr15 100245081 100245255 -3249719 + RSINE1 SINE B4 3 165 0 6 1349 198 71 0 0 chr15 100245259 100245287 -3249687 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 1349 334 227 73 77 chr15 100245396 100245506 -3249468 - PB1D7 SINE Alu 0 127 16 6 1349 424 196 110 51 chr15 100245820 100245938 -3249036 + B1_Mur2 SINE Alu 25 149 0 6 1349 382 240 64 46 chr15 100246333 100246442 -3248532 + RSINE1 SINE B4 5 115 -50 6 1349 269 259 15 145 chr15 100246508 100246639 -3248335 + MT2B LTR ERVL 145 258 -343 6 1349 549 190 40 0 chr15 100246541 100246641 -3248333 + PB1D9 SINE Alu 10 113 -7 6 1349 228 244 254 25 chr15 100246641 100246663 -3248311 + B4A SINE B4 95 244 -48 6 1349 328 203 93 13 chr15 100246706 100246781 -3248193 + PB1D7 SINE Alu 1 81 -39 6 1349 183 42 0 0 chr15 100247057 100247081 -3247893 + (CAGG)n Simple_repeat Simple_repeat 3 26 0 6 1349 518 256 113 0 chr15 100247586 100247719 -3247255 + B1F2 SINE Alu 2 149 0 6 1349 315 262 48 10 chr15 100248194 100248298 -3246676 - RSINE1 SINE B4 -2 163 56 6 1349 337 320 0 10 chr15 100248344 100248442 -3246532 + PB1D10 SINE Alu 21 117 0 6 1349 213 65 0 0 chr15 100248983 100249014 -3245960 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1349 480 269 0 84 chr15 100249022 100249164 -3245810 + ID_B1 SINE B4 93 222 -2 6 1349 356 224 10 0 chr15 100249289 100249387 -3245587 + (TA)n Simple_repeat Simple_repeat 1 99 0 6 1349 541 206 0 62 chr15 100249421 100249613 -3245361 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 1349 190 290 0 31 chr15 100249703 100249767 -3245207 - L2 LINE L2 -1605 1814 1753 6 1349 532 194 78 56 chr15 100250130 100250272 -3244702 + B1_Mur4 SINE Alu 5 149 -1 6 1349 305 312 88 0 chr15 100250295 100250420 -3244554 + B1F SINE Alu 1 136 -13 6 1349 233 77 0 49 chr15 100250448 100250489 -3244485 + (GGGGA)n Simple_repeat Simple_repeat 2 40 0 6 1349 629 220 126 50 chr15 100250627 100250809 -3244165 + B3A SINE B2 2 197 -1 6 1349 21 0 0 0 chr15 100251314 100251335 -3243639 + AT_rich Low_complexity Low_complexity 1 21 0 6 1349 475 270 80 7 chr15 100252093 100252231 -3242743 + B1F2 SINE Alu 1 148 -1 6 1349 198 0 0 0 chr15 100252508 100252530 -3242444 + (CCA)n Simple_repeat Simple_repeat 2 23 0 6 1349 22 0 0 0 chr15 100253135 100253157 -3241817 + GC_rich Low_complexity Low_complexity 1 22 0 6 1349 375 164 51 17 chr15 100255724 100255962 -3239012 + (CA)n Simple_repeat Simple_repeat 1 246 0 6 1349 855 192 0 0 chr15 100255977 100256123 -3238851 + B1_Mus2 SINE Alu 2 147 0 7 1349 1195 34 0 45 chr15 100256127 100256281 -3238693 + B1_Mm SINE Alu 1 147 0 7 1349 798 172 18 24 chr15 100256507 100256678 -3238296 + B3 SINE B2 8 172 -21 7 1349 849 158 8 0 chr15 100256920 100257053 -3237921 - B1_Mus2 SINE Alu -12 135 2 7 1349 447 281 146 0 chr15 100257089 100257274 -3237700 - B3 SINE B2 -3 213 2 7 1349 237 221 0 0 chr15 100257557 100257625 -3237349 + GA-rich Low_complexity Low_complexity 1 68 0 7 1349 199 361 30 30 chr15 100258066 100258166 -3236808 - L2b LINE L2 0 3375 3276 7 1349 417 257 9 56 chr15 100258222 100258329 -3236645 + PB1D9 SINE Alu 1 102 -18 7 1349 356 209 46 122 chr15 100258329 100258343 -3236631 + MT2B LTR ERVL 198 274 -327 7 1349 423 132 0 0 chr15 100258581 100258649 -3236325 + (A)n Simple_repeat Simple_repeat 1 68 0 7 1349 325 253 80 0 chr15 100258702 100258777 -3236197 - ID_B1 SINE B4 -10 214 134 7 1349 543 159 13 44 chr15 100258772 100258905 -3236069 - B1_Mur4 SINE Alu -6 143 7 7 1349 254 222 14 100 chr15 100258916 100258986 -3235988 + LTR16A LTR ERVL 45 108 -343 7 1349 297 269 86 0 chr15 100259019 100259112 -3235862 + LTR16A LTR ERVL 297 397 -54 7 1349 577 93 0 76 chr15 100259401 100259506 -3235468 - B2_Mm2 SINE B2 0 195 99 7 1349 806 96 27 82 chr15 100259528 100259675 -3235299 - B1_Mus1 SINE Alu 0 148 10 7 1349 412 243 41 129 chr15 100259530 100259700 -3235274 - B4 SINE B4 -69 223 69 7 1349 1167 77 13 0 chr15 100259779 100259935 -3235039 + B2_Mm1t SINE B2 1 158 -35 7 1349 276 0 44 22 chr15 100259935 100259980 -3234994 + (TAA)n Simple_repeat Simple_repeat 3 48 0 7 1349 1225 43 0 0 chr15 100259980 100260121 -3234853 + B1_Mus2 SINE Alu 1 141 -6 7 1349 216 0 0 0 chr15 100260123 100260147 -3234827 + (TAA)n Simple_repeat Simple_repeat 1 24 0 7 1349 534 273 30 0 chr15 100260235 100260367 -3234607 - ID_B1 SINE B4 0 224 89 7 1349 749 200 191 20 chr15 100261049 100261343 -3233631 - MTD LTR MaLR -8 411 1 7 1349 447 279 0 19 chr15 100261498 100261604 -3233370 - PB1D10 SINE Alu -9 108 5 7 1349 611 175 52 17 chr15 100261791 100261913 -3233061 + B1_Mur2 SINE Alu 25 149 0 7 1349 351 0 0 0 chr15 100262128 100262167 -3232807 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 1349 511 265 26 0 chr15 100262178 100262295 -3232679 - RSINE1 SINE B4 -5 160 41 7 1349 213 280 45 36 chr15 100262358 100262469 -3232505 + BC1_Mm scRNA scRNA 18 129 -23 7 1349 256 342 0 0 chr15 100262460 100262533 -3232441 + PB1D10 SINE Alu 26 98 -19 7 1349 242 149 21 0 chr15 100262678 100262725 -3232249 - B1_Mus2 SINE Alu 0 147 100 7 1349 242 202 91 45 chr15 100262851 100262939 -3232035 - MT2C_Mm LTR ERVL -230 245 154 7 1349 365 321 9 27 chr15 100262863 100262975 -3231999 - PB1D10 SINE Alu -7 110 1 7 1349 249 298 58 87 chr15 100263073 100263085 -3231889 + ID SINE ID 80 88 -136 7 1349 366 240 91 10 chr15 100263085 100263199 -3231775 + B1F SINE Alu 2 123 -24 7 1349 255 93 0 0 chr15 100263199 100263242 -3231732 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1349 270 0 0 0 chr15 100263242 100263271 -3231703 + (GA)n Simple_repeat Simple_repeat 2 31 0 7 1349 514 267 35 0 chr15 100263294 100263410 -3231564 + ID_B1 SINE B4 104 223 -1 7 1349 761 117 92 0 chr15 100263560 100263680 -3231294 - B1_Mus2 SINE Alu -1 146 16 7 1349 242 175 0 136 chr15 100263682 100263748 -3231226 - B1F SINE Alu -1 148 92 7 1349 300 225 41 98 chr15 100264231 100264354 -3230620 + MT2B LTR ERVL 163 278 -323 7 1349 570 198 33 0 chr15 100264253 100264374 -3230600 + B1_Mur1 SINE Alu 21 145 -4 7 1349 598 257 69 0 chr15 100264375 100264519 -3230455 + RSINE1 SINE B4 2 155 -10 7 1349 984 243 276 28 chr15 100264585 100265012 -3229962 - MT2A LTR ERVL 0 533 1 7 1349 789 167 29 36 chr15 100265251 100265388 -3229586 - B1_Mur3 SINE Alu -12 137 2 7 1349 547 285 133 10 chr15 100265389 100265584 -3229390 - B4A SINE B4 -60 232 14 7 1349 183 231 77 0 chr15 100265621 100265673 -3229301 - L2a LINE L2 -339 3087 3032 7 1349 912 118 7 7 chr15 100265676 100265812 -3229162 + B1_Mus1 SINE Alu 1 136 -12 7 1349 333 136 0 63 chr15 100265813 100265869 -3229105 - MTB_Mm LTR MaLR -5 414 362 7 1349 980 115 0 33 chr15 100265869 100266022 -3228952 + B1_Mur3 SINE Alu 1 148 -1 7 1349 579 96 0 0 chr15 100266028 100266111 -3228863 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 7 1349 1210 165 95 34 chr15 100266113 100266377 -3228597 - MTB_Mm LTR MaLR -106 301 22 7 1349 860 127 0 7 chr15 100266379 100266522 -3228452 + (GGAA)n Simple_repeat Simple_repeat 2 143 0 7 1349 499 192 37 28 chr15 100266604 100266711 -3228263 - PB1D10 SINE Alu 0 117 10 7 1349 217 268 54 0 chr15 100266775 100266831 -3228143 + ID2 SINE ID 25 83 0 7 1349 1542 173 137 23 chr15 100267529 100267777 -3227197 - MTC LTR MaLR 0 421 173 7 1349 1116 49 14 14 chr15 100267777 100267922 -3227052 + B1_Mur4 SINE Alu 5 149 -1 7 1349 1542 173 137 23 chr15 100267922 100268016 -3226958 - MTC LTR MaLR -249 172 41 7 1349 210 319 0 40 chr15 100268245 100268320 -3226654 + BC1_Mm scRNA scRNA 26 97 -55 7 1349 1189 62 0 0 chr15 100268983 100269127 -3225847 + B1_Mm SINE Alu 4 147 0 7 1349 207 0 0 0 chr15 100269127 100269150 -3225824 + (A)n Simple_repeat Simple_repeat 1 23 0 7 1349 580 177 124 0 chr15 100269232 100269345 -3225629 + B1_Mur4 SINE Alu 14 140 -10 7 1349 201 39 0 0 chr15 100269345 100269371 -3225603 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 7 1349 547 246 102 51 chr15 100269371 100269444 -3225530 + B4A SINE B4 218 291 -1 7 1349 180 0 0 0 chr15 100269648 100269668 -3225306 + (C)n Simple_repeat Simple_repeat 1 20 0 7 1349 361 311 29 57 chr15 100269798 100269938 -3225036 - B1F1 SINE Alu -13 136 1 7 1349 690 222 102 37 chr15 100269938 100270000 -3224974 - ID SINE ID -149 75 2 7 168 27 0 0 0 chr15 100270069 100270096 -3224878 + AT_rich Low_complexity Low_complexity 1 27 0 7 1350 310 106 0 0 chr15 100270421 100270468 -3224506 - PB1D9 SINE Alu -51 69 23 7 1350 399 203 100 52 chr15 100270440 100270547 -3224427 + B1_Mur2 SINE Alu 30 136 -13 7 1350 195 42 0 0 chr15 100270547 100270571 -3224403 + (TA)n Simple_repeat Simple_repeat 2 25 0 7 1350 233 273 83 83 chr15 100270576 100270599 -3224375 + B4 SINE B4 70 141 -151 7 1350 244 224 122 0 chr15 100270599 100270648 -3224326 + B1_Mus2 SINE Alu 2 56 -91 7 1350 348 273 43 57 chr15 100270732 100270872 -3224102 + B4A SINE B4 103 240 -52 7 1350 728 176 24 0 chr15 100270864 100270989 -3223985 + B1_Mur4 SINE Alu 22 149 -1 7 1350 540 282 128 9 chr15 100271320 100271538 -3223436 - ORR1D2 LTR MaLR -6 364 121 7 1350 215 274 49 99 chr15 100271590 100271671 -3223303 + RSINE1 SINE B4 89 165 0 7 1350 768 203 0 51 chr15 100271842 100271998 -3222976 - B1_Mur2 SINE Alu 0 149 2 7 1350 1223 165 9 22 chr15 100272022 100272245 -3222729 + URR1B DNA MER1_type 1 220 -5 7 1350 571 39 52 0 chr15 100272390 100272467 -3222507 - B1_Mus2 SINE Alu 0 147 67 7 1350 1003 106 143 0 chr15 100272467 100272628 -3222346 - B2_Mm2 SINE B2 -10 185 2 7 1350 1182 65 137 0 chr15 100272917 100273085 -3221889 + B2_Mm1t SINE B2 1 191 -2 7 1350 251 120 192 39 chr15 100273118 100273170 -3221804 + B1_Mur4 SINE Alu 1 60 -90 7 1350 234 0 0 158 chr15 100273171 100273285 -3221689 + (CAGAG)n Simple_repeat Simple_repeat 5 100 0 7 1350 686 130 0 9 chr15 100273288 100273397 -3221577 + B1_Mur4 SINE Alu 43 150 0 7 1350 453 265 62 97 chr15 100273528 100273754 -3221220 - ERVL-E-int LTR ERVL -5397 270 53 7 1350 237 330 50 20 chr15 100273811 100273910 -3221064 - MLT2F LTR ERVL 0 563 462 7 1350 186 43 0 0 chr15 100273913 100273936 -3221038 + (CGGGGG)n Simple_repeat Simple_repeat 2 24 0 7 1350 411 21 0 0 chr15 100274002 100274050 -3220924 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1350 262 304 132 42 chr15 100274069 100274282 -3220692 - B4 SINE B4 -41 251 20 7 1350 228 338 0 42 chr15 100274248 100274319 -3220655 - ORR1D2 LTR MaLR -244 135 68 7 1350 231 242 135 52 chr15 100274354 100274450 -3220524 + MIR SINE MIR 48 151 -57 7 1350 819 182 127 0 chr15 100274911 100275076 -3219898 + B3 SINE B2 31 216 0 7 1350 299 246 33 0 chr15 100275152 100275213 -3219761 - ID SINE ID -160 64 2 7 1350 252 0 0 0 chr15 100275231 100275259 -3219715 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 7 1350 442 248 18 35 chr15 100275332 100275445 -3219529 + PB1D10 SINE Alu 1 111 -6 7 1350 254 350 0 0 chr15 100275451 100275533 -3219441 - ID4_ SINE ID -59 93 12 7 1350 431 226 29 19 chr15 100275593 100275697 -3219277 + RSINE1 SINE B4 5 109 -56 7 1350 705 206 28 21 chr15 100275707 100275851 -3219123 - B1_Mus2 SINE Alu -1 146 2 7 1350 380 240 52 0 chr15 100275877 100275973 -3219001 + ID_B1 SINE B4 79 179 -45 7 1350 466 203 76 8 chr15 100275888 100275992 -3218982 + B1_Mus1 SINE Alu 9 120 0 7 1350 1573 37 21 0 chr15 100276029 100276217 -3218757 - B2_Mm1a SINE B2 0 193 2 7 1350 978 41 8 0 chr15 100276240 100276361 -3218613 - ORR1B1 LTR MaLR 0 394 273 7 1350 250 103 0 25 chr15 100276354 100276394 -3218580 - ORR1B1 LTR MaLR -355 39 1 7 1350 369 310 18 0 chr15 100276496 100276609 -3218365 + PB1D7 SINE Alu 2 116 -4 7 1350 850 196 162 5 chr15 100276610 100276795 -3218179 + B3 SINE B2 1 214 -2 7 1350 1457 84 5 0 chr15 100276795 100276986 -3217988 - B2_Mm1a SINE B2 0 193 2 7 1350 834 123 55 55 chr15 100277005 100277151 -3217823 + B1_Mur4 SINE Alu 5 150 0 8 1350 419 0 0 19 chr15 100277151 100277203 -3217771 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 8 1350 1147 81 0 13 chr15 100277252 100277402 -3217572 + B1_Mus1 SINE Alu 1 148 0 8 1350 216 0 0 0 chr15 100277402 100277426 -3217548 + (A)n Simple_repeat Simple_repeat 1 24 0 8 1350 269 321 73 0 chr15 100277445 100277554 -3217420 - PB1D10 SINE Alu 0 117 1 8 1350 470 192 91 97 chr15 100277680 100277830 -3217144 - RMER12 LTR ERVK -190 1132 994 8 1350 518 98 0 12 chr15 100277835 100277918 -3217056 + (GGAA)n Simple_repeat Simple_repeat 4 85 0 8 1350 1873 222 165 69 chr15 100277919 100278640 -3216334 - RMER12 LTR ERVK -532 790 1 8 1350 1090 69 108 70 chr15 100278680 100278866 -3216108 + B2_Mm2 SINE B2 2 194 -1 8 1350 346 206 48 0 chr15 100278879 100278942 -3216032 + ID2 SINE ID 4 69 -14 8 1350 1141 81 44 44 chr15 100279101 100279281 -3215693 + B2_Mm2 SINE B2 2 181 -14 8 1350 379 129 203 17 chr15 100279302 100279401 -3215573 + B2_Mm2 SINE B2 47 187 -6 8 1350 894 225 85 23 chr15 100279431 100279690 -3215284 + ORR1D1 LTR MaLR 1 275 -99 8 1350 689 95 162 8 chr15 100279700 100279817 -3215157 - B1_Mus1 SINE Alu -2 146 12 8 1350 382 134 30 0 chr15 100279824 100279891 -3215083 + ORR1D1 LTR MaLR 302 370 0 8 1350 469 261 0 32 chr15 100279962 100280085 -3214889 + PB1D9 SINE Alu 1 119 -1 8 1350 533 185 11 0 chr15 100280114 100280206 -3214768 + 5S rRNA rRNA 1 93 -28 8 1350 464 259 56 0 chr15 100280751 100280859 -3214115 + B1F SINE Alu 14 127 -22 8 1350 220 232 54 0 chr15 100280850 100280906 -3214068 + PB1D7 SINE Alu 61 119 -1 8 1350 24 0 0 0 chr15 100280931 100280955 -3214019 + AT_rich Low_complexity Low_complexity 1 24 0 8 1350 563 238 23 15 chr15 100281217 100281349 -3213625 + ID_B1 SINE B4 83 215 -9 8 1350 666 208 19 7 chr15 100281458 100281538 -3213436 + ID SINE ID 1 82 -142 8 1350 301 330 28 0 chr15 100281538 100281647 -3213327 + PB1D10 SINE Alu 1 112 -5 8 1350 487 251 205 11 chr15 100282129 100282314 -3212660 + ID_B1 SINE B4 2 222 -2 8 1350 909 27 0 0 chr15 100282401 100282512 -3212462 - B1_Mus2 SINE Alu 0 147 37 8 1350 549 253 127 0 chr15 100282536 100282694 -3212280 - B3 SINE B2 -10 206 29 8 1350 534 251 70 25 chr15 100282695 100282904 -3212070 + Lx8 LINE L1 5322 5603 -700 8 1350 349 255 18 2 chr15 100282908 100283002 -3211972 + RSINE1 SINE B4 7 102 -190 8 1350 677 338 40 17 chr15 100283211 100283560 -3211414 + Lx8 LINE L1 5617 5973 -1500 8 1350 527 308 35 14 chr15 100283742 100283887 -3211087 + RSINE1 SINE B4 3 150 -15 8 1350 22 35 0 0 chr15 100283906 100283935 -3211039 + AT_rich Low_complexity Low_complexity 1 29 0 8 1350 1052 67 0 0 chr15 100284061 100284195 -3210779 + B1_Mur4 SINE Alu 16 149 -1 8 1350 269 258 102 79 chr15 100284069 100284246 -3210728 - YREP_Mm Unknown Unknown -1518 294 114 8 1350 584 230 39 8 chr15 100284238 100284365 -3210609 - B1F SINE Alu -5 144 14 8 1350 365 262 12 12 chr15 100284382 100284467 -3210507 + B4 SINE B4 1 85 -207 8 1350 37 39 0 0 chr15 100284528 100284579 -3210395 + AT_rich Low_complexity Low_complexity 1 51 0 8 1350 276 287 115 0 chr15 100284616 100284703 -3210271 + PB1D10 SINE Alu 19 115 -34 8 1350 837 204 0 0 chr15 100284707 100284849 -3210125 + B3 SINE B2 4 145 -71 8 1350 435 83 0 0 chr15 100284851 100284911 -3210063 + (CA)n Simple_repeat Simple_repeat 2 61 0 8 1350 561 72 0 0 chr15 100285051 100285134 -3209840 + (TG)n Simple_repeat Simple_repeat 1 83 0 8 1350 1021 46 1 0 chr15 100285171 100285310 -3209664 - B1_Mus1 SINE Alu 0 148 8 8 1350 503 192 192 0 chr15 100285303 100285407 -3209567 - B1_Mur2 SINE Alu -24 125 2 8 1350 379 137 129 59 chr15 100285325 100285426 -3209548 - MT2B LTR ERVL -345 256 149 8 1350 443 270 6 0 chr15 100285745 100285908 -3209066 + (TA)n Simple_repeat Simple_repeat 2 165 0 8 1350 396 262 0 0 chr15 100285942 100286083 -3208891 + (TG)n Simple_repeat Simple_repeat 2 142 0 8 1350 310 251 29 12 chr15 100286068 100286241 -3208733 + (TATG)n Simple_repeat Simple_repeat 3 178 0 8 1350 787 181 0 0 chr15 100286258 100286391 -3208583 - B1_Mur1 SINE Alu -15 134 2 8 1350 3616 64 115 4 chr15 100286749 100287254 -3207720 - RMER2 LTR ERV1 -4 563 3 8 1350 981 118 0 14 chr15 100287560 100287706 -3207268 - B1_Mus2 SINE Alu 0 147 4 8 1350 189 229 0 0 chr15 100288268 100288316 -3206658 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 8 1350 380 317 85 14 chr15 100288325 100288466 -3206508 - RSINE1 SINE B4 -14 151 1 8 1350 459 48 0 0 chr15 100288773 100288835 -3206139 + (TC)n Simple_repeat Simple_repeat 2 63 0 8 1350 1236 35 0 0 chr15 100288835 100288977 -3205997 - B1_Mus1 SINE Alu -3 145 4 8 1350 1031 199 49 10 chr15 100289097 100289300 -3205674 - B3 SINE B2 0 216 6 8 1350 484 250 56 0 chr15 100289354 100289462 -3205512 + B1F SINE Alu 35 148 -1 8 1350 513 266 28 21 chr15 100289467 100289609 -3205365 + B1F SINE Alu 5 147 -2 8 1350 1170 71 0 0 chr15 100289609 100289749 -3205225 + B1_Mus2 SINE Alu 1 141 -6 8 1350 180 0 0 0 chr15 100290343 100290363 -3204611 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 8 1350 204 158 0 0 chr15 100290387 100290425 -3204549 + T-rich Low_complexity Low_complexity 1 38 0 8 1350 1162 208 218 102 chr15 100291128 100291540 -3203434 - RMER6B LTR ERVK 0 461 2 8 1350 875 239 214 25 chr15 100291574 100291938 -3203036 + Lx8 LINE L1 6483 6915 -558 8 1350 390 161 230 0 chr15 100293284 100293371 -3201603 + B1_Mur2 SINE Alu 23 129 -20 8 1350 265 206 45 60 chr15 100293643 100293710 -3201264 + B1F SINE Alu 83 148 -1 8 1350 186 390 0 12 chr15 100293832 100293915 -3201059 + L2c LINE L2 3266 3347 -40 8 1350 686 245 114 26 chr15 100293983 100294176 -3200798 - ID_B1 SINE B4 -11 213 4 8 1350 736 236 50 1 chr15 100294228 100294401 -3200573 + B3A SINE B2 1 179 -37 8 1350 508 228 114 0 chr15 100294540 100294663 -3200311 - B1_Mur3 SINE Alu -8 141 5 8 1350 942 140 0 20 chr15 100294716 100294862 -3200112 - B1_Mus2 SINE Alu 0 147 5 8 1350 709 202 8 15 chr15 100295095 100295226 -3199748 - B1_Mur1 SINE Alu -6 143 14 8 1350 239 323 0 0 chr15 100295223 100295285 -3199689 + ID_B1 SINE B4 83 144 -80 8 1350 212 375 11 22 chr15 100295224 100295300 -3199674 + PB1 SINE Alu 3 77 -50 8 1350 447 241 138 54 chr15 100295300 100295467 -3199507 + MTE2a LTR MaLR 1 181 -198 8 1350 227 206 266 16 chr15 100295475 100295539 -3199435 + PB1D10 SINE Alu 9 88 -29 8 1350 301 169 231 0 chr15 100295506 100295571 -3199403 + B1_Mus2 SINE Alu 57 136 -11 8 1350 249 266 152 0 chr15 100295640 100295719 -3199255 + MTE2a LTR MaLR 241 331 -48 8 1350 1182 171 88 21 chr15 100295719 100295958 -3199016 + RLTR18 LTR ERVK 1 255 -361 8 1350 974 150 164 52 chr15 100295958 100296011 -3198963 - ORR1A4 LTR MaLR 0 329 285 8 1350 1231 121 21 0 chr15 100296011 100296201 -3198773 - B2_Mm2 SINE B2 -1 194 1 8 1350 974 150 164 52 chr15 100296201 100296379 -3198595 - ORR1A4 LTR MaLR -45 284 72 8 1350 860 196 7 0 chr15 100296398 100296541 -3198433 - B1_Mur1 SINE Alu -4 145 2 8 1350 1325 219 107 46 chr15 100296617 100297178 -3197796 - RMER12 LTR ERVK -597 807 31 8 1350 1882 56 0 0 chr15 100297524 100297758 -3197216 - L1Md_A LINE L1 0 6582 6349 8 1350 305 327 87 111 chr15 100297851 100298023 -3196951 - B4 SINE B4 -25 267 100 8 1350 399 307 87 0 chr15 100298181 100298331 -3196643 - B4A SINE B4 -3 289 127 8 1350 330 306 65 0 chr15 100298404 100298512 -3196462 - B4A SINE B4 -177 115 1 8 1350 28 29 0 0 chr15 100299418 100299453 -3195521 + GC_rich Low_complexity Low_complexity 1 35 0 8 1350 271 261 162 17 chr15 100300804 100300921 -3194053 + MIR SINE MIR 31 164 -98 8 1350 394 233 122 37 chr15 100300965 100301072 -3193902 - ID_B1 SINE B4 -26 198 83 8 1350 275 272 21 11 chr15 100301320 100301413 -3193561 + PB1D10 SINE Alu 22 115 -2 8 1350 858 232 37 42 chr15 100301521 100301737 -3193237 - B3 SINE B2 0 216 2 8 1350 473 0 0 17 chr15 100302660 100302718 -3192256 + (TTTTC)n Simple_repeat Simple_repeat 4 60 0 8 1350 1250 21 0 0 chr15 100302719 100302860 -3192114 - B1_Mus1 SINE Alu -6 142 2 8 1350 1161 155 93 5 chr15 100303114 100303308 -3191666 - B3 SINE B2 -2 214 4 8 1350 536 214 25 17 chr15 100303358 100303477 -3191497 + ID_B1 SINE B4 105 224 0 8 1350 852 204 71 6 chr15 100303513 100303695 -3191279 - B3 SINE B2 0 216 23 8 1350 348 213 78 147 chr15 100303786 100303990 -3190984 - B2_Mm2 SINE B2 -4 191 2 8 1350 368 306 9 9 chr15 100304305 100304414 -3190560 + B3A SINE B2 49 157 -41 8 1350 251 357 42 67 chr15 100304610 100304706 -3190268 - MLT1H1 LTR MaLR -290 265 174 8 1350 389 240 41 10 chr15 100304706 100304803 -3190171 - PB1D9 SINE Alu -16 104 5 8 1350 251 357 42 67 chr15 100304803 100304871 -3190103 - MLT1H1 LTR MaLR -382 173 105 8 1350 771 59 21 2 chr15 100304888 100305003 -3189971 + B1_Mus2 SINE Alu 14 140 -9 8 1350 204 40 0 0 chr15 100305003 100305028 -3189946 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 8 1350 204 40 0 0 chr15 100305032 100305057 -3189917 + (GA)n Simple_repeat Simple_repeat 2 26 0 8 1350 425 191 8 27 chr15 100306188 100306288 -3188686 - B1_Mur1 SINE Alu 0 149 23 8 1350 477 229 22 55 chr15 100306291 100306421 -3188553 - B1F SINE Alu -16 133 1 8 1350 626 237 23 8 chr15 100307398 100307530 -3187444 - B1F1 SINE Alu -15 134 1 8 1350 376 134 30 20 chr15 100307585 100307684 -3187290 + (TA)n Simple_repeat Simple_repeat 1 100 0 8 1350 241 254 191 63 chr15 100307801 100307927 -3187047 - MER20 DNA MER1_type -52 167 26 9 1350 325 254 78 17 chr15 100308623 100308739 -3186235 - PB1 SINE Alu 0 127 5 9 1350 254 289 47 24 chr15 100308753 100308778 -3186196 - PB1D10 SINE Alu -2 115 29 9 1350 304 217 17 0 chr15 100308778 100308838 -3186136 - ID_B1 SINE B4 -54 170 110 9 1350 247 253 138 0 chr15 100309032 100309119 -3185855 - PB1D10 SINE Alu -7 110 12 9 1350 198 0 0 0 chr15 100310695 100310717 -3184257 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 9 1350 455 262 115 0 chr15 100310895 100311017 -3183957 + B1F2 SINE Alu 1 136 -13 9 1350 537 58 0 0 chr15 100311018 100311087 -3183887 + (GAAAA)n Simple_repeat Simple_repeat 2 70 0 9 1350 265 368 94 23 chr15 100313296 100313424 -3181550 + MIR3 SINE MIR 47 183 -25 9 1350 356 168 173 82 chr15 100313750 100313860 -3181114 + B1F SINE Alu 5 124 -25 9 1350 447 106 0 0 chr15 100313891 100313957 -3181017 + (GGGA)n Simple_repeat Simple_repeat 1 66 0 9 1350 450 256 64 85 chr15 100314091 100314232 -3180742 + ID_B1 SINE B4 83 220 -4 9 1350 268 229 240 0 chr15 100315276 100315372 -3179602 + MER3 DNA MER1_type 91 209 0 9 1350 219 285 83 75 chr15 100315862 100315995 -3178979 + L3 LINE CR1 943 1076 -3413 9 1350 492 269 13 54 chr15 100316525 100316674 -3178300 + ID_B1 SINE B4 79 221 -3 9 1350 369 232 62 31 chr15 100317526 100317655 -3177319 + B1_Mur1 SINE Alu 2 134 -15 9 1350 218 184 0 0 chr15 100317666 100317704 -3177270 - B3 SINE B2 -174 42 5 9 1350 1220 56 0 0 chr15 100318751 100318893 -3176081 - B1_Mus1 SINE Alu -2 146 5 9 1350 469 221 164 0 chr15 100319079 100319219 -3175755 - MER3 DNA MER1_type -45 164 2 9 1350 368 276 28 112 chr15 100319235 100319378 -3175596 - MER58B DNA MER1_type -16 325 195 9 1350 247 262 121 16 chr15 100320588 100320712 -3174262 + MER103 DNA DNA 29 165 -1 9 1350 460 195 12 0 chr15 100320935 100321017 -3173957 + ID4 SINE ID 1 83 0 9 1350 762 165 0 0 chr15 100321636 100321757 -3173217 + B1_Mur2 SINE Alu 3 123 -26 9 1350 499 258 7 22 chr15 100321757 100321771 -3173203 + ID_B1 SINE B4 84 216 -8 9 1350 764 169 173 13 chr15 100321794 100321950 -3173024 + B3 SINE B2 9 189 -27 9 1350 252 0 0 0 chr15 100322285 100322313 -3172661 + (A)n Simple_repeat Simple_repeat 1 28 0 9 1350 234 247 0 100 chr15 100322840 100322930 -3172044 + ID4_ SINE ID 3 83 0 9 1350 224 209 23 0 chr15 100323102 100323145 -3171829 - PB1D7 SINE Alu -42 78 35 9 1350 328 189 135 62 chr15 100323473 100323569 -3171405 + PB1D7 SINE Alu 8 110 -10 9 1350 614 228 15 0 chr15 100323941 100324077 -3170897 + B1_Mur3 SINE Alu 5 142 -7 9 1350 685 164 41 0 chr15 100326083 100326205 -3168769 - B1_Mur4 SINE Alu -13 137 11 9 1350 375 264 78 23 chr15 100326098 100326226 -3168748 - B4 SINE B4 -81 211 77 9 1350 964 51 0 0 chr15 100326325 100326443 -3168531 - B1_Mm SINE Alu -29 118 1 9 1350 429 20 0 0 chr15 100326527 100326577 -3168397 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 1350 639 117 36 46 chr15 100326622 100326769 -3168205 - B1_Mur4 SINE Alu -1 149 18 9 1350 242 288 14 107 chr15 100326668 100326808 -3168166 - RLTR25A LTR ERVK -531 572 446 9 1350 297 0 0 0 chr15 100327002 100327035 -3167939 + (TG)n Simple_repeat Simple_repeat 1 33 0 9 1350 577 182 154 7 chr15 100327385 100327534 -3167440 + B3 SINE B2 45 215 -1 9 1350 970 139 14 0 chr15 100327563 100327707 -3167267 + B1_Mur3 SINE Alu 1 146 -3 9 1350 461 168 242 8 chr15 100327735 100327855 -3167119 + B1_Mur1 SINE Alu 1 148 -1 9 1350 221 0 0 33 chr15 100328028 100328058 -3166916 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 9 1350 1250 41 0 7 chr15 100328063 100328212 -3166762 - B1_Mus1 SINE Alu 0 148 1 9 1350 236 195 101 121 chr15 100328532 100328631 -3166343 + LTR78 LTR ERV1 363 459 -845 9 1350 359 264 167 53 chr15 100328980 100329041 -3165933 - B3A SINE B2 -48 150 73 9 1350 324 0 0 0 chr15 100329041 100329077 -3165897 + (TG)n Simple_repeat Simple_repeat 1 36 0 9 1350 359 264 167 53 chr15 100329077 100329147 -3165827 - B3A SINE B2 -126 72 5 9 1350 287 227 61 0 chr15 100329145 100329211 -3165763 - B3 SINE B2 -79 137 68 9 1350 2276 128 95 10 chr15 100329327 100329720 -3165254 + MTC LTR MaLR 1 413 -8 9 1350 4127 52 20 12 chr15 100329804 100330312 -3164662 - RLTR1B LTR ERV1 0 512 1 9 1350 2248 88 6 48 chr15 100330313 100330649 -3164325 + ORR1A2 LTR MaLR 6 327 0 9 1350 201 74 0 0 chr15 100330676 100330703 -3164271 + (GA)n Simple_repeat Simple_repeat 2 28 0 9 1350 440 241 74 102 chr15 100330867 100331043 -3163931 - ID_B1 SINE B4 -1 223 53 9 1350 1622 176 89 58 chr15 100331456 100331817 -3163157 + ORR1D1 LTR MaLR 1 372 -2 9 1350 226 214 85 51 chr15 100332160 100332219 -3162755 + 4.5SRNA scRNA scRNA 25 85 -9 9 1350 742 178 95 15 chr15 100332268 100332405 -3162569 + B1_Mur4 SINE Alu 1 148 -2 9 1350 866 165 201 17 chr15 100332521 100332700 -3162274 - B3 SINE B2 -4 212 1 9 1350 342 300 130 0 chr15 100332791 100332891 -3162083 + B1_Mur1 SINE Alu 3 115 -34 9 1350 351 250 27 91 chr15 100333346 100333456 -3161518 + MT2B LTR ERVL 155 257 -344 9 1350 801 127 79 0 chr15 100333373 100333499 -3161475 + B1_Mus1 SINE Alu 11 146 -2 9 1350 198 71 0 0 chr15 100333657 100333685 -3161289 + (A)n Simple_repeat Simple_repeat 1 28 0 9 1350 491 259 22 22 chr15 100334210 100334344 -3160630 + ID_B1 SINE B4 12 145 -79 9 1350 266 235 62 115 chr15 100334989 100335085 -3159889 - PB1D9 SINE Alu -5 115 25 9 1350 296 301 58 0 chr15 100335318 100335421 -3159553 + PB1D10 SINE Alu 3 111 -6 9 1350 214 289 137 81 chr15 100335329 100335453 -3159521 + B4A SINE B4 100 230 -62 9 1350 428 289 25 63 chr15 100335633 100335792 -3159182 + B4 SINE B4 63 215 -77 9 1350 576 320 9 62 chr15 100335821 100336031 -3158943 + B3 SINE B2 1 199 -17 9 1350 635 259 53 0 chr15 100336075 100336245 -3158729 + B3A SINE B2 17 195 -3 9 1350 232 323 0 58 chr15 100336287 100336356 -3158618 + B4 SINE B4 216 280 -12 9 1350 381 43 0 0 chr15 100336366 100336413 -3158561 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 1350 449 312 35 0 chr15 100336438 100336579 -3158395 + RSINE1 SINE B4 2 147 -18 9 1350 1097 77 0 14 chr15 100336989 100337124 -3157850 + B1_Mus1 SINE Alu 1 135 -13 9 1350 288 0 0 0 chr15 100337124 100337156 -3157818 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 9 1350 361 283 66 53 chr15 100337469 100337658 -3157316 - B3 SINE B2 -2 193 1 9 1350 507 230 93 13 chr15 100338045 100338195 -3156779 + B3 SINE B2 29 190 -26 9 1350 411 286 53 0 chr15 100338342 100338475 -3156499 - Lx8 LINE L1 -188 7285 7146 9 1350 234 358 8 16 chr15 100338602 100338724 -3156250 + Charlie2a DNA MER1_type 12 132 -2729 9 1350 295 327 56 107 chr15 100339052 100339230 -3155744 + Charlie2a DNA MER1_type 1992 2160 -701 9 1350 218 303 106 0 chr15 100339527 100339593 -3155381 - BC1_Mm scRNA scRNA -65 87 15 9 1350 263 293 35 0 chr15 100339540 100339598 -3155376 - tRNA-Ala-GCY_ tRNA tRNA -12 63 4 9 1350 194 116 23 0 chr15 100339688 100339731 -3155243 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 9 1350 1151 50 43 0 chr15 100339735 100339876 -3155098 - B1_Mus1 SINE Alu 0 148 2 9 1350 33 25 0 0 chr15 100339971 100340011 -3154963 + AT_rich Low_complexity Low_complexity 1 40 0 9 1350 460 205 36 0 chr15 100340028 100340111 -3154863 + B3A SINE B2 19 104 -94 9 1350 405 0 0 0 chr15 100340121 100340166 -3154808 + (CA)n Simple_repeat Simple_repeat 2 46 0 9 1350 286 286 16 0 chr15 100340172 100340235 -3154739 + ID_B1 SINE B4 154 217 -7 9 1350 415 280 24 70 chr15 100340258 100340438 -3154536 + B4A SINE B4 1 165 0 9 1350 669 207 237 0 chr15 100340496 100340665 -3154309 - B3 SINE B2 -7 209 1 9 1350 319 310 96 73 chr15 100340984 100341256 -3153718 - B4A SINE B4 -8 284 7 9 1350 261 0 0 0 chr15 100341279 100341308 -3153666 + (T)n Simple_repeat Simple_repeat 1 29 0 9 1350 211 238 24 0 chr15 100341396 100341438 -3153536 - ID_B1 SINE B4 -106 118 76 9 1350 1214 48 0 0 chr15 100341464 100341610 -3153364 - B1_Mus2 SINE Alu 0 147 2 9 1350 1320 85 31 16 chr15 100341636 100341828 -3153146 + B2_Mm2 SINE B2 1 195 0 9 1350 206 200 0 0 chr15 100341832 100341867 -3153107 + (CAAG)n Simple_repeat Simple_repeat 1 35 0 9 1350 450 248 0 35 chr15 100341876 100341989 -3152985 + PB1 SINE Alu 1 109 -18 9 1350 219 146 0 0 chr15 100342667 100342708 -3152266 + (CTG)n Simple_repeat Simple_repeat 2 42 0 9 1350 259 292 0 0 chr15 100342944 100343009 -3151965 + BC1_Mm scRNA scRNA 20 84 -68 9 1350 276 250 0 0 chr15 100343344 100343396 -3151578 - RSINE1 SINE B4 -37 128 77 9 1350 547 198 0 0 chr15 100344122 100344223 -3150751 - B1_Mus2 SINE Alu -38 109 9 9 1350 294 307 51 34 chr15 100344846 100344964 -3150010 + PB1D9 SINE Alu 1 120 0 9 1350 256 108 0 0 chr15 100345618 100345655 -3149319 - B2_Mm2 SINE B2 -157 38 2 9 1350 242 285 46 59 chr15 100345690 100345843 -3149131 - RSINE1 SINE B4 -12 153 3 9 1350 261 83 0 0 chr15 100345873 100345909 -3149065 + (TCTG)n Simple_repeat Simple_repeat 1 36 0 9 1350 414 0 0 0 chr15 100345911 100345957 -3149017 + (TG)n Simple_repeat Simple_repeat 1 46 0 9 1350 348 64 0 0 chr15 100345957 100346004 -3148970 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 1350 375 305 15 59 chr15 100346034 100346170 -3148804 - B3A SINE B2 -68 130 1 1 1350 335 208 52 78 chr15 100346192 100346307 -3148667 - L1MEg LINE L1 -4091 1993 1882 1 1350 1161 76 0 0 chr15 100346323 100346468 -3148506 - B1_Mm SINE Alu 0 147 3 1 1350 562 149 25 66 chr15 100346472 100346594 -3148380 - PB1D9 SINE Alu -2 118 2 1 1350 793 178 15 0 chr15 100346628 100346763 -3148211 - B1_Mus1 SINE Alu -1 147 11 1 1350 349 230 80 34 chr15 100346904 100347004 -3147970 + PB1 SINE Alu 21 116 -1 1 1350 353 286 82 15 chr15 100347024 100347159 -3147815 + B1F1 SINE Alu 5 148 -1 1 1350 1595 37 5 0 chr15 100347335 100347523 -3147451 - B2_Mm1t SINE B2 -4 189 1 1 1350 233 301 13 52 chr15 100347615 100347692 -3147282 - ID4 SINE ID -5 78 5 1 1350 1179 177 76 83 chr15 100347732 100348034 -3146940 - Lx4A LINE L1 0 7058 6759 1 1350 213 227 45 0 chr15 100348589 100348633 -3146341 + ID SINE ID 15 60 -164 1 1350 369 131 0 0 chr15 100348644 100348705 -3146269 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 1350 279 281 0 0 chr15 100348724 100348781 -3146193 + ID4_ SINE ID 3 59 -24 1 1350 279 175 0 0 chr15 100348792 100348849 -3146125 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 1350 320 299 13 0 chr15 100348868 100348945 -3146029 + ID4 SINE ID 3 80 -3 1 1350 550 170 160 0 chr15 100349143 100349249 -3145725 + B1_Mur4 SINE Alu 23 145 -5 1 1350 201 156 0 0 chr15 100349704 100349736 -3145238 + CT-rich Low_complexity Low_complexity 3 34 0 1 1350 286 371 0 0 chr15 100349830 100349919 -3145055 + PB1D10 SINE Alu 6 94 -23 1 1350 1295 27 0 0 chr15 100350099 100350247 -3144727 + B1_Mus1 SINE Alu 1 148 0 1 1350 492 241 9 9 chr15 100350362 100350471 -3144503 + RLTR33 LTR ERVK 175 283 -395 1 1350 535 131 185 9 chr15 100350838 100350946 -3144028 + B1_Mus2 SINE Alu 1 127 -20 1 1350 353 284 57 85 chr15 100350946 100351006 -3143968 + MT2B2 LTR ERVL 176 327 -257 1 1350 687 182 112 59 chr15 100351561 100351748 -3143226 + B3A SINE B2 2 198 0 1 1350 581 184 34 26 chr15 100351879 100351996 -3142978 + PB1D9 SINE Alu 1 118 -2 1 1350 355 331 65 12 chr15 100352031 100352199 -3142775 + L1M5 LINE L1 5639 5815 -309 1 1350 509 184 158 16 chr15 100352383 100352510 -3142464 - B1_Mur2 SINE Alu 0 149 5 1 1350 403 318 31 0 chr15 100352627 100352756 -3142218 - ID_B1 SINE B4 -90 134 2 1 1350 448 226 18 52 chr15 100352973 100353079 -3141895 - PB1 SINE Alu 0 117 4 1 1350 277 326 35 15 chr15 100353163 100353264 -3141710 - PB1D9 SINE Alu -7 113 13 1 1350 825 126 8 30 chr15 100353501 100353632 -3141342 + B1_Mur4 SINE Alu 5 132 -18 1 1350 456 19 0 0 chr15 100353940 100353993 -3140981 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 1350 322 208 56 0 chr15 100354226 100354298 -3140676 + RSINE1 SINE B4 29 104 -61 1 1350 655 245 31 6 chr15 100354288 100354448 -3140526 + B3 SINE B2 48 211 -5 1 1350 274 225 44 111 chr15 100354470 100354560 -3140414 + MT2B LTR ERVL 156 239 -362 1 1350 721 179 24 0 chr15 100354501 100354624 -3140350 + B1_Mur2 SINE Alu 24 149 0 1 1350 202 145 27 80 chr15 100354649 100354703 -3140271 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1 1350 577 252 89 0 chr15 100354703 100354838 -3140136 + B1_Mur1 SINE Alu 1 147 -2 1 1350 202 145 27 80 chr15 100354838 100354858 -3140116 + (TAA)n Simple_repeat Simple_repeat 1 21 0 1 1350 1198 89 13 0 chr15 100354881 100355039 -3139935 + B2_Mm2 SINE B2 3 162 -33 1 1350 180 0 0 0 chr15 100355039 100355059 -3139915 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1 1350 258 247 0 120 chr15 100355074 100355166 -3139808 + ID SINE ID 3 83 -141 1 1350 266 206 41 81 chr15 100355093 100355179 -3139795 + ID4 SINE ID 13 95 -57 1 1350 240 225 12 70 chr15 100355200 100355286 -3139688 + L1M2 LINE L1 5564 5644 -668 1 1350 428 258 79 58 chr15 100355302 100355441 -3139533 + PB1D7 SINE Alu 4 147 -3 1 1350 247 180 392 15 chr15 100355531 100355661 -3139313 + L1MB3 LINE L1 5831 6009 -174 1 1350 1237 41 0 0 chr15 100356160 100356306 -3138668 + B1_Mm SINE Alu 2 147 0 1 1350 231 36 0 0 chr15 100356306 100356334 -3138640 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1350 630 145 36 9 chr15 100356426 100356537 -3138437 - PB1D9 SINE Alu -5 115 2 1 1350 204 158 0 0 chr15 100356580 100356618 -3138356 + T-rich Low_complexity Low_complexity 1 38 0 1 1350 1058 64 43 0 chr15 100356625 100356766 -3138208 - B1_Mus2 SINE Alu 0 147 1 1 1350 1437 74 11 0 chr15 100356771 100356960 -3138014 - B2_Mm1t SINE B2 -2 191 1 1 1350 229 253 162 12 chr15 100357002 100357082 -3137892 - RSINE1 SINE B4 -69 96 5 1 1350 336 242 0 0 chr15 100357669 100357731 -3137243 + ID4 SINE ID 11 72 -11 1 1350 588 40 0 0 chr15 100357731 100357806 -3137168 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 1350 634 280 0 7 chr15 100357810 100357954 -3137020 + RSINE1 SINE B4 23 165 0 1 1350 189 0 0 0 chr15 100358041 100358062 -3136912 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1 1350 315 281 25 42 chr15 100358118 100358237 -3136737 + PB1D10 SINE Alu 1 117 0 1 1350 383 304 91 75 chr15 100358445 100358644 -3136330 - MIRb SINE MIR 0 268 67 1 1350 363 293 16 41 chr15 100359429 100359550 -3135424 + PB1 SINE Alu 8 125 -2 1 1350 237 208 139 0 chr15 100359641 100359713 -3135261 + MLT1A1 LTR MaLR 315 396 -12 1 1350 1493 50 17 0 chr15 100359832 100360012 -3134962 + B2_Mm2 SINE B2 1 183 -12 1 1350 1459 162 70 13 chr15 100360012 100360312 -3134662 + RLTR11A2 LTR ERVK 211 527 0 1 1350 2356 73 0 25 chr15 100360360 100360684 -3134290 + L1Md_F2 LINE L1 6265 6580 -2 1 1350 2338 255 200 11 chr15 100360759 100361600 -3133374 + Lx8 LINE L1 6192 7191 -282 1 1350 282 56 0 0 chr15 100361659 100361695 -3133279 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1350 206 250 0 29 chr15 100361717 100361787 -3133187 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 1350 210 71 0 0 chr15 100361809 100361837 -3133137 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1350 328 174 0 21 chr15 100361859 100361953 -3133021 + (TG)n Simple_repeat Simple_repeat 1 92 0 1 1350 210 37 0 0 chr15 100361975 100362002 -3132972 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1350 354 146 21 10 chr15 100362079 100362176 -3132798 + (TG)n Simple_repeat Simple_repeat 1 98 0 1 1350 468 299 112 27 chr15 100362180 100362438 -3132536 + Lx8 LINE L1 7185 7464 -9 1 1350 1005 222 5 5 chr15 100362474 100362673 -3132301 + B3 SINE B2 3 201 -15 1 1350 434 196 38 36 chr15 100362895 100363059 -3131915 + PB1D9 SINE Alu 5 150 0 1 1350 511 340 44 30 chr15 100363097 100363300 -3131674 - B3 SINE B2 -3 213 8 1 1350 316 255 35 120 chr15 100363302 100363430 -3131544 - B1F2 SINE Alu 0 117 1 1 1350 264 306 8 143 chr15 100363324 100363450 -3131524 - ID_B1 SINE B4 -49 175 67 1 1350 273 119 0 0 chr15 100363468 100363510 -3131464 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1350 224 77 26 0 chr15 100363535 100363574 -3131400 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1350 405 275 137 7 chr15 100363627 100363766 -3131208 - B4A SINE B4 -51 241 85 1 1350 853 133 166 32 chr15 100364102 100364289 -3130685 + B3 SINE B2 1 212 -4 1 1350 333 159 217 0 chr15 100364310 100364379 -3130595 + PB1D10 SINE Alu 1 84 -33 1 1350 596 280 8 8 chr15 100364898 100365031 -3129943 - RSINE1 SINE B4 -31 134 2 1 1350 1463 121 405 20 chr15 100365209 100365513 -3129461 + MTC LTR MaLR 1 421 0 1 1350 243 305 30 117 chr15 100365864 100365963 -3129011 - RLTR25B LTR ERVK -407 621 528 1 1350 207 0 0 0 chr15 100365963 100365986 -3128988 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1350 243 305 30 117 chr15 100365986 100366083 -3128891 - RLTR25B LTR ERVK -501 527 442 1 1350 741 206 30 0 chr15 100366083 100366117 -3128857 - B1_Mur4 SINE Alu -10 140 6 1 1350 527 281 14 28 chr15 100366187 100366330 -3128644 + ID_B1 SINE B4 5 145 -79 1 1350 185 265 217 0 chr15 100366853 100366936 -3128038 + L3 LINE CR1 2457 2557 -1932 1 1350 194 231 15 0 chr15 100367013 100367078 -3127896 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 1350 300 210 41 12 chr15 100367107 100367276 -3127698 + (CA)n Simple_repeat Simple_repeat 1 174 0 1 1350 186 410 10 10 chr15 100367339 100367440 -3127534 + L3 LINE CR1 2778 2878 -1611 1 1350 1466 70 27 0 chr15 100367512 100367699 -3127275 - B2_Mm1t SINE B2 0 193 2 1 1350 286 257 159 35 chr15 100367786 100367899 -3127075 + ID_B1 SINE B4 93 219 -5 1 1350 258 32 0 0 chr15 100368038 100368069 -3126905 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1350 1040 95 7 7 chr15 100368069 100368206 -3126768 - B1_Mus1 SINE Alu -10 138 1 1 1350 279 0 0 0 chr15 100368333 100368364 -3126610 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 1350 659 163 138 0 chr15 100368520 100368643 -3126331 + B1_Mur4 SINE Alu 1 140 -10 1 1350 677 210 38 139 chr15 100368670 100368790 -3126184 + L1_Rod LINE L1 3016 3131 -2716 1 1350 1205 62 0 0 chr15 100368790 100368936 -3126038 + B1_Mus2 SINE Alu 2 147 0 1 1350 677 210 38 139 chr15 100368936 100369131 -3125843 + L1_Rod LINE L1 3132 3299 -2548 1 1350 398 274 28 99 chr15 100369132 100369274 -3125700 + MT2B LTR ERVL 126 257 -344 1 1350 873 130 0 22 chr15 100369183 100369317 -3125657 + B1_Mm SINE Alu 12 142 -5 1 1350 4532 205 169 26 chr15 100369340 100369821 -3125153 + L1_Rod LINE L1 3336 3853 -1994 1 1350 215 31 0 30 chr15 100369821 100369854 -3125120 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 1350 4532 205 169 26 chr15 100369854 100370005 -3124969 + L1_Rod LINE L1 3854 4009 -1838 1 1350 526 177 430 0 chr15 100370005 100370163 -3124811 - URR1A DNA MER1_type 0 226 1 1 1350 4532 205 169 26 chr15 100370163 100371085 -3123889 + L1_Rod LINE L1 4010 5111 -736 1 1350 580 258 55 59 chr15 100371094 100371134 -3123840 + B3 SINE B2 3 44 -172 1 1350 7325 50 14 2 chr15 100371134 100372017 -3122957 + RLTR13B1 LTR ERVK 1 893 0 1 1350 580 258 55 59 chr15 100372017 100372178 -3122796 + B3 SINE B2 45 203 -13 1 1350 210 118 0 0 chr15 100372216 100372250 -3122724 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1350 523 214 225 27 chr15 100372256 100372443 -3122531 + ID_B1 SINE B4 1 224 0 1 1350 309 220 35 35 chr15 100372491 100372576 -3122398 + ID_B1 SINE B4 137 221 -3 1 1350 2218 100 19 0 chr15 100372952 100373271 -3121703 + IAPEY2_LTR LTR ERVK 33 357 0 1 1350 7913 122 23 8 chr15 100373271 100374465 -3120509 + IAPEY3-int LTR ERVK 1 1211 -6469 1 1350 9424 108 4 17 chr15 100374446 100375807 -3119167 + IAPEy-int LTR ERVK 6171 7513 0 1 1350 2261 82 85 0 chr15 100375807 100376136 -3118838 + IAPEY2_LTR LTR ERVK 1 357 0 1 1350 1204 61 0 0 chr15 100376692 100376839 -3118135 + B1_Mm SINE Alu 1 147 0 1 1350 231 61 0 0 chr15 100376841 100376874 -3118100 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 1 1350 3292 34 37 0 chr15 100376898 100377280 -3117694 + MTA_Mm LTR MaLR 1 396 0 1 1350 9145 40 8 0 chr15 100377280 100378369 -3116605 + MTA_Mm-int LTR MaLR 1 1098 0 1 1350 3348 23 0 0 chr15 100378369 100378755 -3116219 + MTA_Mm LTR MaLR 1 386 -10 1 1350 328 226 173 24 chr15 100378820 100378947 -3116027 - B4A SINE B4 -6 286 141 1 1350 249 232 62 125 chr15 100379001 100379129 -3115845 - B4A SINE B4 -171 121 2 1 1350 938 128 14 7 chr15 100379167 100379309 -3115665 - B1_Mur4 SINE Alu -1 149 7 1 1350 379 315 72 72 chr15 100379168 100379349 -3115625 - B4 SINE B4 -69 223 43 1 1350 204 40 0 0 chr15 100379464 100379489 -3115485 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1350 1346 89 10 21 chr15 100379735 100379929 -3115045 + B2_Mm1a SINE B2 1 192 -1 1 1350 404 296 25 25 chr15 100380031 100380149 -3114825 + RSINE1 SINE B4 29 146 -19 1 1350 234 0 0 0 chr15 100380156 100380182 -3114792 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1350 708 155 17 8 chr15 100380718 100380835 -3114139 + PB1D9 SINE Alu 2 119 -1 1 1350 298 354 0 0 chr15 100381000 100381096 -3113878 - ID_B1 SINE B4 -49 175 80 1 1350 210 105 0 0 chr15 100381107 100381145 -3113829 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 1350 1068 30 0 29 chr15 100381145 100381272 -3113702 - B1_Mus2 SINE Alu -7 140 14 1 1350 505 215 56 84 chr15 100381272 100381287 -3113687 - B4 SINE B4 -73 219 82 1 1350 331 252 80 9 chr15 100382794 100382906 -3112068 - PB1D9 SINE Alu 0 120 1 1 1350 211 211 0 0 chr15 100382908 100382960 -3112014 + T-rich Low_complexity Low_complexity 2 53 0 1 1350 564 160 40 10 chr15 100383094 100383195 -3111779 + PB1D9 SINE Alu 1 104 -16 1 1350 497 240 3 0 chr15 100383341 100383457 -3111517 + B1F2 SINE Alu 5 123 -26 1 1350 468 137 17 136 chr15 100383480 100383598 -3111376 - B1_Mur4 SINE Alu -6 144 41 1 1350 434 249 38 9 chr15 100383839 100383952 -3111022 + B1_Mur3 SINE Alu 6 114 -6 1 1350 434 266 27 34 chr15 100383965 100384113 -3110861 + B1F1 SINE Alu 2 148 -1 1 1350 217 65 0 0 chr15 100384135 100384166 -3110808 + B3A SINE B2 3 33 -165 1 1350 435 220 8 68 chr15 100384166 100384283 -3110691 + ID_B1 SINE B4 80 189 -35 1 1350 737 159 16 16 chr15 100384178 100384306 -3110668 + B1_Mus1 SINE Alu 6 133 -15 1 1350 1212 235 200 62 chr15 100384317 100384821 -3110153 - RMER4B LTR ERVK -11 574 1 1 1350 263 292 75 9 chr15 100384872 100384979 -3109995 + B3A SINE B2 82 195 -3 1 1350 1219 165 10 5 chr15 100384986 100385193 -3109781 + B3 SINE B2 1 208 -8 1 1350 3320 64 28 12 chr15 100385392 100385820 -3109154 + RLTR10C LTR ERVK 1 435 -1 1 1350 465 19 0 0 chr15 100385991 100386045 -3108929 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1350 390 333 38 44 chr15 100386605 100386972 -3108002 + MMERGLN-int LTR ERV1 1308 1672 -5884 1 1350 2365 96 12 3 chr15 100387982 100388306 -3106668 - ORR1A2 LTR MaLR 0 327 1 1 1350 2588 161 21 47 chr15 100388376 100388890 -3106084 + RMER1C Other Other 824 1324 -18 1 1350 1445 179 3 126 chr15 100389033 100389390 -3105584 - ORR1B1 LTR MaLR 0 394 82 1 1350 4145 14 0 46 chr15 100389390 100389907 -3105067 - MT2_Mm LTR ERVL 0 493 1 1 1350 301 0 0 0 chr15 100389907 100389945 -3105029 - MERVL-int LTR ERVL 0 5485 5448 1 1350 379 167 46 35 chr15 100389945 100390032 -3104942 - ORR1B1-int LTR MaLR -1323 640 553 1 1350 39450 16 14 0 chr15 100390032 100395319 -3099655 - MERVL-int LTR ERVL -125 5360 1 1 1350 4115 14 0 57 chr15 100395319 100395842 -3099132 - MT2_Mm LTR ERVL 0 493 1 1 1350 304 336 89 41 chr15 100395893 100396346 -3098628 + MMERGLN-int LTR ERV1 2783 3288 -4268 1 1350 1256 167 18 0 chr15 100396383 100396605 -3098369 + URR1A DNA MER1_type 1 226 0 1 1350 1747 150 75 0 chr15 100396649 100396955 -3098019 - ORR1A4 LTR MaLR 0 329 1 1 1350 365 350 59 63 chr15 100397112 100397329 -3097645 + MuLV-int LTR ERV1 2223 2438 -2625 1 1350 1277 105 16 0 chr15 100397329 100397519 -3097455 + B2_Mm2 SINE B2 1 193 -2 1 1350 295 350 60 65 chr15 100397519 100397723 -3097251 + MuLV-int LTR ERV1 3742 3943 -3613 1 1350 665 314 80 42 chr15 100397849 100398274 -3096700 + MuLV-int LTR ERV1 4036 4476 -3130 1 1350 1247 105 11 0 chr15 100398359 100398549 -3096425 + B2_Mm1t SINE B2 1 192 -1 1 1350 721 332 102 38 chr15 100398597 100399129 -3095845 + RLTR14-int LTR ERV1 2877 3442 -1875 1 1350 363 318 95 74 chr15 100399525 100399851 -3095123 + RLTR14-int LTR ERV1 4983 5315 -2 1 1350 318 105 310 26 chr15 100400137 100400253 -3094721 - B2_Mm2 SINE B2 0 195 47 1 1350 1122 120 11 17 chr15 100400319 100400497 -3094477 - B2_Mm1t SINE B2 -14 179 3 1 1350 361 278 109 16 chr15 100400497 100400625 -3094349 + RLTR14 LTR ERV1 230 369 -13 1 1350 1028 69 106 34 chr15 100400836 100401015 -3093959 + B2_Mm2 SINE B2 1 192 -3 1 168 692 219 7 0 chr15 100401057 100401194 -3093780 + B1_Mur4 SINE Alu 12 149 -1 1 1351 993 312 93 54 chr15 100401244 100401705 -3093269 - MT2A LTR ERVL 0 533 55 1 1351 267 239 107 27 chr15 100401670 100401782 -3093192 - MTD LTR MaLR -298 121 1 1 1351 345 315 67 0 chr15 100401782 100401931 -3093043 + RSINE1 SINE B4 5 163 -2 1 1351 1128 198 5 5 chr15 100401960 100402168 -3092806 - B3 SINE B2 -8 208 1 1 1351 771 82 0 0 chr15 100402220 100402330 -3092644 - B1_Mus1 SINE Alu -37 111 2 1 1351 792 148 44 0 chr15 100402323 100402458 -3092516 + B1_Mus1 SINE Alu 2 142 -6 1 1351 40 21 0 0 chr15 100402469 100402516 -3092458 + AT_rich Low_complexity Low_complexity 1 47 0 1 1351 1239 7 0 7 chr15 100402583 100402731 -3092243 - B1_Mm SINE Alu 0 147 1 1 1351 258 262 135 31 chr15 100403853 100404011 -3090963 + MIRb SINE MIR 17 202 -66 1 1351 295 250 46 83 chr15 100405089 100405198 -3089776 - MER115 DNA Tip100 -1 692 588 1 1351 226 174 43 0 chr15 100406649 100406695 -3088279 - L1Md_Gf LINE L1 -5820 702 655 1 1351 436 242 108 39 chr15 100407089 100407218 -3087756 + ID_B1 SINE B4 87 224 0 1 1351 1165 103 29 0 chr15 100409219 100409394 -3085580 + B2_Mm2 SINE B2 2 181 -14 1 1351 416 88 0 5 chr15 100409420 100409485 -3085489 + B2_Mm2 SINE B2 47 109 -107 1 1351 351 0 0 0 chr15 100409487 100409526 -3085448 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 1351 378 0 0 0 chr15 100409526 100409567 -3085407 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 1351 224 30 30 0 chr15 100409584 100409617 -3085357 + (GA)n Simple_repeat Simple_repeat 1 34 0 1 1351 1084 61 0 33 chr15 100410057 100410209 -3084765 + B1_Mus1 SINE Alu 2 148 0 1 1351 377 167 0 89 chr15 100410958 100411037 -3083937 + RSINE1 SINE B4 16 87 -78 1 1351 399 254 39 47 chr15 100411746 100411874 -3083100 - B4A SINE B4 -138 154 28 1 1351 779 159 14 14 chr15 100412018 100412158 -3082816 + B1_Mur3 SINE Alu 1 140 -9 1 1351 308 177 89 0 chr15 100412623 100412705 -3082269 - B1F SINE Alu -2 147 55 1 1351 944 64 0 0 chr15 100412734 100412859 -3082115 - B1_Mus1 SINE Alu -23 125 1 1 1351 226 256 24 16 chr15 100412746 100412873 -3082101 - ORR1B1-int LTR MaLR -750 759 632 1 1351 362 38 38 0 chr15 100412883 100412936 -3082038 + B1_Mus2 SINE Alu 83 137 -10 1 1351 200 291 0 44 chr15 100415583 100415763 -3079211 + GA-rich Low_complexity Low_complexity 5 176 0 1 1351 232 197 16 16 chr15 100416425 100416487 -3078487 + (CTGGGG)n Simple_repeat Simple_repeat 2 63 0 1 1351 228 122 0 0 chr15 100417322 100417363 -3077611 + (TAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 1351 447 158 52 9 chr15 100417570 100417685 -3077289 - Lx9 LINE L1 -127 7517 7398 1 1351 330 194 35 21 chr15 100419147 100419289 -3075685 + (TAAA)n Simple_repeat Simple_repeat 4 147 0 1 1351 920 131 0 20 chr15 100419570 100419718 -3075256 - B1_Mur3 SINE Alu -3 146 2 1 1351 214 175 48 0 chr15 100420164 100420227 -3074747 + (TAAA)n Simple_repeat Simple_repeat 4 69 0 1 1351 960 58 36 0 chr15 100420292 100420430 -3074544 + B2_Mm1t SINE B2 51 193 0 1 1351 295 244 0 173 chr15 100420464 100420568 -3074406 + B1F SINE Alu 12 97 -20 1 1351 281 250 28 139 chr15 100420810 100420862 -3074112 - B1F SINE Alu -18 131 80 1 1351 1814 178 116 31 chr15 100420862 100421286 -3073688 + RMER6B LTR ERVK 2 461 0 1 1351 1533 27 5 0 chr15 100421291 100421477 -3073497 + B2_Mm1t SINE B2 1 187 -6 1 1351 281 250 28 139 chr15 100421477 100421562 -3073412 - B1F SINE Alu -70 79 4 1 1351 858 145 12 6 chr15 100421630 100421797 -3073177 + CT-rich Low_complexity Low_complexity 1 168 0 1 1351 787 200 7 0 chr15 100421797 100421937 -3073037 - B1_Mus2 SINE Alu -6 141 1 1 1351 815 131 80 0 chr15 100421992 100422129 -3072845 + B1_Mus1 SINE Alu 1 148 0 1 1351 372 167 0 0 chr15 100422905 100422977 -3071997 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 1351 332 287 102 0 chr15 100423052 100423160 -3071814 - B4A SINE B4 -172 120 2 1 1351 1032 127 0 0 chr15 100423409 100423567 -3071407 + B2_Mm2 SINE B2 1 158 -37 1 1351 369 0 0 0 chr15 100423568 100423609 -3071365 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 1 1351 1079 59 0 0 chr15 100423901 100424037 -3070937 + B1_Mus2 SINE Alu 2 137 -10 1 1351 186 43 0 0 chr15 100424037 100424060 -3070914 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1351 366 75 27 107 chr15 100424134 100424209 -3070765 - B3 SINE B2 -4 212 144 1 1351 814 141 15 7 chr15 100424647 100424783 -3070191 + B1_Mur4 SINE Alu 1 137 -13 1 1351 414 0 0 0 chr15 100425289 100425335 -3069639 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 1 1351 181 319 76 25 chr15 100425381 100425500 -3069474 - MIRb SINE MIR -14 254 130 1 1351 277 239 0 15 chr15 100425591 100425659 -3069315 - ID4_ SINE ID -16 67 1 1 1351 299 320 47 31 chr15 100425771 100425964 -3069010 + MLT1A0 LTR MaLR 214 396 -12 1 1351 360 231 26 0 chr15 100426023 100426101 -3068873 - ID2 SINE ID 0 83 4 1 1351 1239 27 0 0 chr15 100426123 100426270 -3068704 - B1_Mm SINE Alu 0 147 1 1 1351 504 212 70 9 chr15 100426319 100426433 -3068541 - B1_Mur1 SINE Alu -20 129 9 1 1351 475 277 113 5 chr15 100426438 100426623 -3068351 - L1MB5 LINE L1 -38 6136 5932 1 1351 436 188 30 0 chr15 100426624 100426725 -3068249 - B3A SINE B2 -94 104 1 1 1351 950 160 101 25 chr15 100426836 100427035 -3067939 - URR1A DNA MER1_type 0 226 13 1 1351 404 279 41 8 chr15 100427105 100427228 -3067746 - ID_B1 SINE B4 -2 222 96 1 1351 778 157 22 0 chr15 100427541 100427675 -3067299 - B1_Mur4 SINE Alu -12 138 2 1 1351 1344 33 5 16 chr15 100427677 100427864 -3067110 - L1Md_F2 LINE L1 0 6582 6398 1 1351 183 156 0 0 chr15 100428151 100428183 -3066791 + T-rich Low_complexity Low_complexity 1 32 0 1 1351 592 182 16 5 chr15 100428183 100428329 -3066645 - B1_Mus1 SINE Alu 0 150 1 1 1351 1458 34 0 0 chr15 100428339 100428515 -3066459 + (TTC)n Simple_repeat Simple_repeat 3 178 0 1 1351 668 169 0 8 chr15 100428517 100428648 -3066326 + CT-rich Low_complexity Low_complexity 2 131 0 1 1351 405 207 47 147 chr15 100428668 100428838 -3066136 - RSINE1 SINE B4 0 165 13 1 1351 27 29 0 0 chr15 100430024 100430058 -3064916 + GC_rich Low_complexity Low_complexity 1 34 0 1 1351 31 26 0 0 chr15 100430261 100430299 -3064675 + GC_rich Low_complexity Low_complexity 1 38 0 1 1351 23 33 0 0 chr15 100430422 100430452 -3064522 + GC_rich Low_complexity Low_complexity 1 30 0 1 1351 200 256 0 0 chr15 100430461 100430500 -3064474 + C-rich Low_complexity Low_complexity 1 39 0 1 1351 378 0 0 0 chr15 100431776 100431818 -3063156 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 1351 347 0 23 0 chr15 100431818 100431860 -3063114 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1351 194 235 12 0 chr15 100431936 100432017 -3062957 + (CA)n Simple_repeat Simple_repeat 2 83 0 1 1351 811 163 50 11 chr15 100432017 100432197 -3062777 + RMER17C LTR ERVK 1 187 -223 1 1351 778 162 7 0 chr15 100432397 100432539 -3062435 - B1_Mus2 SINE Alu 0 147 5 1 1351 437 174 8 135 chr15 100432431 100432557 -3062417 - MT2B LTR ERVL -337 264 155 1 1351 271 119 0 0 chr15 100432842 100432884 -3062090 + B2_Mm2 SINE B2 1 42 -153 1 1351 301 215 125 55 chr15 100433133 100433261 -3061713 + RLTR13D6 LTR ERVK 727 863 -39 1 1351 1056 146 0 0 chr15 100433287 100433465 -3061509 + (TCTCC)n Simple_repeat Simple_repeat 1 178 0 1 1351 1029 162 24 14 chr15 100433465 100433678 -3061296 + RMER17C LTR ERVK 196 410 0 1 1351 342 237 41 0 chr15 100433678 100433775 -3061199 + (CA)n Simple_repeat Simple_repeat 1 101 0 1 1351 538 242 162 26 chr15 100433791 100433982 -3060992 + ID_B1 SINE B4 3 219 -5 1 1351 356 210 28 0 chr15 100434033 100434119 -3060855 + B3 SINE B2 80 172 -44 1 1351 335 230 13 13 chr15 100434260 100434335 -3060639 - MLT1A0 LTR MaLR -257 108 34 1 1351 261 57 0 0 chr15 100434629 100434664 -3060310 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1351 196 200 0 32 chr15 100434690 100434752 -3060222 + GA-rich Low_complexity Low_complexity 6 65 0 1 1351 250 260 180 40 chr15 100434777 100434877 -3060097 - RSINE1 SINE B4 -41 124 11 1 1351 411 21 0 0 chr15 100434944 100434992 -3059982 + (CCCCCA)n Simple_repeat Simple_repeat 3 50 0 1 1351 229 197 225 5 chr15 100436128 100436212 -3058762 - B1_Mur2 SINE Alu -46 103 1 1 1351 719 168 58 0 chr15 100436362 100436499 -3058475 + B1_Mur1 SINE Alu 5 149 0 1 1351 922 114 14 0 chr15 100436537 100436677 -3058297 + B1_Mus1 SINE Alu 2 143 -5 1 1351 1197 27 0 13 chr15 100436677 100436825 -3058149 + B1_Mus1 SINE Alu 1 147 -1 1 1351 348 184 0 0 chr15 100436832 100436930 -3058044 + A-rich Low_complexity Low_complexity 1 98 0 1 1351 623 233 55 35 chr15 100436936 100437129 -3057845 + B3A SINE B2 1 193 -2 1 1351 267 211 0 0 chr15 100437127 100437179 -3057795 + B3A SINE B2 2 53 -145 1 1351 219 231 19 37 chr15 100437191 100437245 -3057729 + B3 SINE B2 100 152 -64 1 1351 237 167 0 0 chr15 100437225 100437267 -3057707 + B3A SINE B2 12 53 -145 1 1351 442 184 106 10 chr15 100437279 100437383 -3057591 + B3 SINE B2 100 213 -3 1 1351 867 77 138 0 chr15 100437425 100437555 -3057419 + B1_Mus1 SINE Alu 1 148 0 1 1351 207 0 0 0 chr15 100437555 100437578 -3057396 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 1351 266 133 0 0 chr15 100437653 100437698 -3057276 - B1_Mur4 SINE Alu -40 110 66 1 1351 221 265 221 0 chr15 100437717 100437785 -3057189 + PB1D10 SINE Alu 12 94 -23 1 1351 640 158 74 15 chr15 100438175 100438310 -3056664 + B3 SINE B2 1 143 -73 1 1351 793 225 45 6 chr15 100438305 100438484 -3056490 - B3 SINE B2 -28 188 3 1 1351 327 49 0 0 chr15 100438507 100438548 -3056426 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 1 1351 261 57 0 0 chr15 100438717 100438752 -3056222 + (CCTG)n Simple_repeat Simple_repeat 2 36 0 1 1351 228 182 0 0 chr15 100438786 100438830 -3056144 + T-rich Low_complexity Low_complexity 1 44 0 1 1351 431 267 52 22 chr15 100438838 100438972 -3056002 + B1_Mur1 SINE Alu 2 139 -10 1 1351 180 0 0 0 chr15 100438972 100438992 -3055982 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1 1351 634 219 55 30 chr15 100438992 100439147 -3055827 - B3A SINE B2 -8 190 31 1 1351 921 144 7 0 chr15 100439198 100439344 -3055630 - B1_Mus2 SINE Alu 0 147 1 1 1351 31 26 0 0 chr15 100439357 100439395 -3055579 + AT_rich Low_complexity Low_complexity 1 38 0 1 1351 236 204 19 0 chr15 100439560 100439614 -3055360 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1351 250 231 8 8 chr15 100439649 100439767 -3055207 + (CA)n Simple_repeat Simple_repeat 2 119 0 1 1351 365 222 43 22 chr15 100440841 100440933 -3054041 - B1_Mus2 SINE Alu -13 134 41 1 1351 648 262 89 0 chr15 100441317 100441508 -3053466 - B3 SINE B2 -7 209 2 1 1351 366 307 56 74 chr15 100441543 100441705 -3053269 + RSINE1 SINE B4 6 164 -1 1 1351 451 252 18 0 chr15 100441799 100441910 -3053064 - PB1D10 SINE Alu 0 117 5 1 1351 402 157 12 35 chr15 100441916 100442002 -3052972 - B1_Mur2 SINE Alu -1 148 65 1 1351 266 203 51 0 chr15 100442074 100442133 -3052841 - MTE2a LTR MaLR -317 62 1 1 1351 927 182 24 0 chr15 100442198 100442368 -3052606 - B3 SINE B2 -41 175 2 1 1351 296 44 44 0 chr15 100442418 100442463 -3052511 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 1 1351 216 0 0 0 chr15 100442675 100442699 -3052275 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1351 301 316 61 0 chr15 100442872 100442970 -3052004 - PB1 SINE Alu 0 127 24 1 1351 284 286 13 13 chr15 100443068 100443146 -3051828 - B4A SINE B4 -214 78 1 1 1351 1245 80 5 60 chr15 100443157 100443197 -3051777 - B2_Mm2 SINE B2 -6 189 160 1 1351 207 0 0 0 chr15 100443197 100443220 -3051754 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1 1351 1245 80 5 60 chr15 100443220 100443379 -3051595 - B2_Mm2 SINE B2 -36 159 1 1 1351 21 0 0 0 chr15 100443386 100443407 -3051567 + AT_rich Low_complexity Low_complexity 1 21 0 1 1351 371 266 35 9 chr15 100443436 100443550 -3051424 - RSINE1 SINE B4 -31 134 18 1 1351 200 366 60 30 chr15 100443655 100443821 -3051153 + L2b LINE L2 2820 2990 -429 1 1351 295 394 67 56 chr15 100443867 100444152 -3050822 + L2b LINE L2 3080 3367 -8 1 1351 240 314 17 28 chr15 100445551 100445728 -3049246 + (CGGGG)n Simple_repeat Simple_repeat 4 178 0 1 1351 235 263 52 22 chr15 100445753 100445938 -3049036 + (CAGGG)n Simple_repeat Simple_repeat 1 190 0 1 1351 350 221 77 13 chr15 100447143 100447282 -3047692 - B3A SINE B2 -35 160 7 1 1351 1280 82 60 0 chr15 100447756 100447940 -3047034 + B2_Mm2 SINE B2 1 195 0 1 1351 345 231 63 27 chr15 100447968 100448079 -3046895 + PB1D10 SINE Alu 1 115 -2 1 1351 867 226 43 0 chr15 100448079 100448287 -3046687 + ID_B1 SINE B4 1 217 -7 1 1351 773 156 7 2 chr15 100448805 100448941 -3046033 + B1_Mus1 SINE Alu 11 140 -8 1 1351 223 269 0 37 chr15 100449260 100449314 -3045660 + ID4 SINE ID 4 55 -28 1 1351 364 308 43 0 chr15 100449545 100449662 -3045312 + B1F1 SINE Alu 12 133 -16 1 1351 423 192 28 37 chr15 100451373 100451481 -3043493 + PB1D7 SINE Alu 14 120 0 1 1351 329 241 38 0 chr15 100453260 100453339 -3041635 + B3 SINE B2 132 213 -3 1 1351 699 156 27 54 chr15 100453481 100453630 -3041344 + B1_Mus2 SINE Alu 1 145 -2 1 1351 679 181 16 8 chr15 100453667 100453795 -3041179 + B1_Mur1 SINE Alu 5 133 -16 1 1351 311 226 196 0 chr15 100453810 100453917 -3041057 + B1F SINE Alu 2 133 -14 1 1351 188 309 50 60 chr15 100453919 100454019 -3040955 + MIRb SINE MIR 81 179 -89 1 1351 206 143 20 0 chr15 100454104 100454153 -3040821 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1351 213 263 122 108 chr15 100454223 100454436 -3040538 - B4A SINE B4 -11 281 66 1 1351 296 261 65 11 chr15 100454414 100454507 -3040467 + PB1D9 SINE Alu 22 119 -1 1 1351 284 207 0 0 chr15 100454530 100454588 -3040386 - B4A SINE B4 -232 60 3 1 1351 1449 67 0 5 chr15 100454633 100454829 -3040145 - B2_Mm2 SINE B2 0 195 1 1 1351 281 191 73 153 chr15 100455029 100455043 -3039931 - MT2B LTR ERVL -301 300 187 1 1351 611 165 9 9 chr15 100455043 100455153 -3039821 - B1_Mur1 SINE Alu -17 132 23 1 1351 236 299 93 0 chr15 100455332 100455429 -3039545 + PB1D7 SINE Alu 15 120 0 1 1351 281 294 10 19 chr15 100455452 100455556 -3039418 + GA-rich Low_complexity Low_complexity 2 104 0 1 1351 600 195 9 0 chr15 100456032 100456145 -3038829 - B1_Mur4 SINE Alu -11 139 26 1 1351 346 191 31 8 chr15 100456397 100456524 -3038450 + (TG)n Simple_repeat Simple_repeat 2 131 0 1 1351 395 251 6 0 chr15 100456537 100456712 -3038262 + (TG)n Simple_repeat Simple_repeat 1 176 0 1 1351 198 171 0 0 chr15 100456737 100456778 -3038196 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1351 645 252 20 0 chr15 100456784 100456931 -3038043 + B3A SINE B2 36 185 -13 1 1351 228 277 15 0 chr15 100456949 100457014 -3037960 + RSINE1 SINE B4 3 68 -97 1 1351 547 261 45 25 chr15 100457015 100457172 -3037802 - ID_B1 SINE B4 -62 162 3 1 1351 1108 55 7 0 chr15 100457227 100457372 -3037602 + B1_Mus2 SINE Alu 2 147 0 1 1351 702 163 54 0 chr15 100457372 100457501 -3037473 - B1_Mur3 SINE Alu -13 136 1 1 1351 318 245 128 0 chr15 100457524 100457626 -3037348 - PB1D9 SINE Alu -5 115 1 1 1351 213 240 211 13 chr15 100457654 100457730 -3037244 + B1_Mur3 SINE Alu 13 103 -46 1 1351 335 312 43 14 chr15 100457862 100458002 -3036972 + Tigger9a DNA Tigger 558 701 -31 1 1351 180 0 0 0 chr15 100458002 100458022 -3036952 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1351 378 192 95 57 chr15 100458310 100458415 -3036559 + PB1D10 SINE Alu 1 109 -8 1 1351 327 263 111 0 chr15 100458665 100458764 -3036210 + PB1D7 SINE Alu 1 110 -10 1 1351 226 234 0 0 chr15 100458781 100458828 -3036146 + PB1D9 SINE Alu 1 47 -73 1 1351 490 302 6 58 chr15 100458965 100459137 -3035837 + RSINE1 SINE B4 2 164 -1 1 1351 558 108 0 0 chr15 100459153 100459236 -3035738 + (TC)n Simple_repeat Simple_repeat 1 83 0 1 1351 345 212 0 0 chr15 100459240 100459306 -3035668 + PB1D10 SINE Alu 51 116 -1 1 1351 272 276 102 0 chr15 100459572 100459635 -3035339 + B3 SINE B2 7 71 -145 1 1351 428 0 19 0 chr15 100459635 100459687 -3035287 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1351 272 276 102 0 chr15 100459687 100459721 -3035253 + B3 SINE B2 72 112 -104 1 1351 253 230 32 13 chr15 100459754 100459848 -3035126 + L1M3 LINE L1 5813 5909 -274 1 1351 347 279 101 0 chr15 100459856 100459985 -3034989 + B1_Mur2 SINE Alu 6 147 -2 1 1351 548 225 9 0 chr15 100460001 100460112 -3034862 - B3 SINE B2 -104 112 1 1 1351 256 352 64 18 chr15 100460374 100460704 -3034270 - L2a LINE L2 -124 3302 2958 1 1351 761 231 62 38 chr15 100460828 100461039 -3033935 + B3 SINE B2 1 216 0 1 1351 1323 67 62 0 chr15 100461072 100461250 -3033724 + B2_Mm2 SINE B2 2 190 -5 1 1351 653 93 111 0 chr15 100461320 100461428 -3033546 - PB1D9 SINE Alu 0 120 1 1 1351 288 242 31 62 chr15 100462188 100462285 -3032689 + BC1_Mm scRNA scRNA 2 95 -57 1 1351 320 192 19 19 chr15 100462564 100462670 -3032304 + (TG)n Simple_repeat Simple_repeat 1 106 0 1 1351 590 211 28 0 chr15 100462670 100462779 -3032195 - PB1D9 SINE Alu -8 112 1 1 1351 228 234 238 16 chr15 100462792 100462918 -3032056 - L2 LINE L2 -1532 1887 1734 1 1351 354 98 0 0 chr15 100463356 100463407 -3031567 + (CAA)n Simple_repeat Simple_repeat 1 51 0 1 1351 180 77 0 0 chr15 100464340 100464366 -3030608 + (GGGTG)n Simple_repeat Simple_repeat 5 30 0 1 1351 208 0 62 0 chr15 100464685 100464717 -3030257 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 1 1351 491 203 65 95 chr15 100464887 100465056 -3029918 + RSINE1 SINE B4 2 165 0 1 1351 746 299 66 41 chr15 100465082 100465098 -3029876 + L1M3 LINE L1 5293 5306 -868 1 1351 1123 42 28 0 chr15 100465098 100465241 -3029733 + B1_Mus1 SINE Alu 2 148 0 1 1351 893 277 67 32 chr15 100465241 100465590 -3029384 + L1M3 LINE L1 5307 5667 -516 1 1351 232 258 30 0 chr15 100465613 100465679 -3029295 + L1M3 LINE L1 5842 5909 -274 1 1351 540 261 0 8 chr15 100466095 100466215 -3028759 - ID_B1 SINE B4 -28 196 78 1 1351 219 69 0 0 chr15 100466478 100466507 -3028467 + (GGGTG)n Simple_repeat Simple_repeat 3 31 0 1 1351 299 317 26 12 chr15 100467565 100467734 -3027240 + MIR SINE MIR 13 176 -86 1 1351 225 270 187 13 chr15 100467967 100468042 -3026932 + MIR SINE MIR 167 254 -8 1 1351 21 36 0 0 chr15 100468104 100468132 -3026842 + AT_rich Low_complexity Low_complexity 1 28 0 1 1351 334 208 14 14 chr15 100468197 100468270 -3026704 + B3A SINE B2 84 156 -42 1 1351 216 260 64 64 chr15 100468290 100468368 -3026606 + B4 SINE B4 1 78 -214 1 1351 492 252 54 40 chr15 100469096 100469245 -3025729 - ID_B1 SINE B4 -54 170 20 1 1351 189 0 0 0 chr15 100469589 100469610 -3025364 + (CTTG)n Simple_repeat Simple_repeat 2 22 0 1 1351 1386 42 0 98 chr15 100469979 100470193 -3024781 - B2_Mm1a SINE B2 0 193 1 1 1351 317 233 117 0 chr15 100470952 100471055 -3023919 + PB1D10 SINE Alu 2 116 -1 1 1351 830 29 0 9 chr15 100471692 100471798 -3023176 + (TG)n Simple_repeat Simple_repeat 1 105 0 1 1351 366 253 0 0 chr15 100472247 100472338 -3022636 + (TG)n Simple_repeat Simple_repeat 2 92 0 1 1351 591 257 51 23 chr15 100472445 100472620 -3022354 - ID_B1 SINE B4 -43 181 2 1 1351 373 115 0 65 chr15 100473114 100473207 -3021767 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 1351 285 332 61 101 chr15 100473230 100473271 -3021703 - B4A SINE B4 0 292 268 1 1351 216 0 0 0 chr15 100473271 100473295 -3021679 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 1351 285 332 61 101 chr15 100473295 100473481 -3021493 - B4A SINE B4 -25 267 74 1 1351 1183 55 0 0 chr15 100473509 100473655 -3021319 - B1_Mus2 SINE Alu 0 147 2 1 1351 1014 145 117 20 chr15 100473703 100473900 -3021074 + B3 SINE B2 1 216 0 1 1351 464 269 49 43 chr15 100473940 100474103 -3020871 + RSINE1 SINE B4 2 165 0 1 1351 616 205 12 126 chr15 100474156 100474323 -3020651 + B1_Mur1 SINE Alu 1 148 -1 1 1351 293 274 62 69 chr15 100474584 100474729 -3020245 + B1F2 SINE Alu 1 144 -5 1 1351 1220 74 0 0 chr15 100474821 100474984 -3019990 + B2_Mm1t SINE B2 2 164 -29 1 1351 189 74 0 0 chr15 100474984 100475011 -3019963 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 1351 539 218 40 0 chr15 100475089 100475213 -3019761 + B1_Mur2 SINE Alu 1 129 -20 1 1351 279 104 0 0 chr15 100475672 100475720 -3019254 + (TCC)n Simple_repeat Simple_repeat 2 49 0 1 1351 452 260 47 0 chr15 100477340 100477467 -3017507 + RSINE1 SINE B4 2 134 -31 1 1351 372 268 94 39 chr15 100479158 100479286 -3015688 - B1F SINE Alu -14 135 1 1 1351 395 78 0 15 chr15 100480259 100480324 -3014650 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 1351 418 198 110 0 chr15 100480916 100481007 -3013967 + PB1D9 SINE Alu 2 102 -18 1 1351 1039 85 0 0 chr15 100481453 100481594 -3013380 + B1_Mus1 SINE Alu 2 142 -6 1 1351 344 268 52 10 chr15 100481910 100482022 -3012952 + PB1D10 SINE Alu 7 126 -21 1 1351 364 230 7 61 chr15 100482505 100482653 -3012321 + C-rich Low_complexity Low_complexity 1 140 0 1 1351 180 0 0 0 chr15 100482666 100482686 -3012288 + (TCC)n Simple_repeat Simple_repeat 2 21 0 1 1351 264 297 33 0 chr15 100483184 100483275 -3011699 + MIR SINE MIR 32 125 -83 1 1351 782 202 50 94 chr15 100483525 100483694 -3011280 + B3A SINE B2 1 164 -31 1 1351 378 0 0 0 chr15 100483694 100483736 -3011238 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1351 606 202 50 94 chr15 100483736 100483768 -3011206 + B2_Mm2 SINE B2 165 192 -3 1 1351 312 271 172 33 chr15 100483775 100483849 -3011125 + B1_Mur2 SINE Alu 2 92 -57 1 1351 2335 125 72 8 chr15 100483849 100484235 -3010739 + MTC LTR MaLR 3 413 -8 1 1351 369 0 0 0 chr15 100484261 100484302 -3010672 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 1 1351 1350 57 40 0 chr15 100484310 100484485 -3010489 + B2_Mm2 SINE B2 2 183 -12 1 1351 192 40 0 0 chr15 100484485 100484510 -3010464 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1 1351 1394 53 37 0 chr15 100484611 100484798 -3010176 + B2_Mm2 SINE B2 2 195 0 1 1351 202 231 0 0 chr15 100484945 100484984 -3009990 + (TTAGGG)n Simple_repeat Simple_repeat 4 42 0 1 1351 247 309 64 0 chr15 100484984 100485078 -3009896 + RSINE1 SINE B4 24 123 -42 1 1351 423 0 0 0 chr15 100485100 100485147 -3009827 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1351 27 29 0 0 chr15 100485160 100485194 -3009780 + AT_rich Low_complexity Low_complexity 1 34 0 1 1351 253 333 53 40 chr15 100485202 100485352 -3009622 - L3 LINE CR1 -251 4238 4087 1 1351 598 198 0 8 chr15 100485368 100485485 -3009489 + PB1D10 SINE Alu 1 116 -1 1 1351 669 211 29 91 chr15 100485533 100485742 -3009232 + B3A SINE B2 3 198 0 1 1351 347 250 12 12 chr15 100488295 100488376 -3006598 - PB1D7 SINE Alu -9 111 31 1 1351 659 274 24 24 chr15 100488398 100488603 -3006371 - B3A SINE B2 -1 194 2 1 1351 1170 123 37 11 chr15 100488719 100488908 -3006066 - B2_Mm2 SINE B2 0 195 2 1 1351 794 214 50 15 chr15 100488932 100489131 -3005843 - B3 SINE B2 -10 206 1 1 1351 282 132 0 0 chr15 100489131 100489184 -3005790 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1351 375 23 0 0 chr15 100489339 100489383 -3005591 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1351 387 113 0 0 chr15 100489383 100489454 -3005520 + (GA)n Simple_repeat Simple_repeat 1 71 0 1 1351 308 307 60 17 chr15 100489980 100490096 -3004878 - RSINE1 SINE B4 -39 126 6 1 1351 242 333 25 0 chr15 100490490 100490571 -3004403 - B3A SINE B2 -103 95 13 1 1351 240 35 0 0 chr15 100490779 100490808 -3004166 + (TCTG)n Simple_repeat Simple_repeat 1 29 0 1 1351 484 310 41 41 chr15 100491237 100491432 -3003542 + ID_B1 SINE B4 27 221 -3 1 1351 924 121 7 20 chr15 100491794 100491931 -3003043 + B1_Mur4 SINE Alu 1 138 -12 1 1351 300 53 0 0 chr15 100491931 100491969 -3003005 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 1 1351 924 121 7 20 chr15 100491969 100491983 -3002991 + B1_Mur4 SINE Alu 139 149 -1 1 1351 402 250 96 0 chr15 100492315 100492419 -3002555 - PB1D7 SINE Alu 0 117 4 1 1351 230 319 48 56 chr15 100492336 100492361 -3002613 - MT2B LTR ERVL -357 244 195 1 1351 245 303 0 0 chr15 100492361 100492427 -3002547 - B4 SINE B4 -146 146 81 1 1351 230 319 48 56 chr15 100492427 100492462 -3002512 - MT2B LTR ERVL -357 194 120 1 1351 812 90 29 22 chr15 100493343 100493480 -3001494 - B1_Mus1 SINE Alu -1 147 10 1 1351 703 208 7 53 chr15 100493910 100494062 -3000912 + RSINE1 SINE B4 21 165 0 1 1351 180 0 0 0 chr15 100495147 100495167 -2999807 + (CATA)n Simple_repeat Simple_repeat 3 22 0 1 1351 902 149 0 0 chr15 100495261 100495402 -2999572 - B1_Mur2 SINE Alu -8 141 1 1 1351 22 0 0 0 chr15 100495803 100495825 -2999149 + AT_rich Low_complexity Low_complexity 1 22 0 1 1351 436 214 97 0 chr15 100495850 100495953 -2999021 - 5S rRNA rRNA -8 113 1 1 1351 428 271 8 8 chr15 100496143 100496262 -2998712 - PB1D7 SINE Alu -1 119 1 1 1351 180 0 0 0 chr15 100496502 100496522 -2998452 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1351 186 71 0 0 chr15 100497209 100497237 -2997737 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1 1351 208 264 75 0 chr15 100497876 100497929 -2997045 - MIRm SINE MIR -105 171 115 1 1351 243 0 0 0 chr15 100498037 100498064 -2996910 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1351 339 245 176 21 chr15 100498740 100498928 -2996046 + ID_B1 SINE B4 1 217 -7 1 1351 269 186 0 5 chr15 100498977 100499042 -2995932 + PB1D10 SINE Alu 58 120 0 1 1351 788 129 30 0 chr15 100499109 100499241 -2995733 - B1_Mur2 SINE Alu 0 149 14 1 1351 261 246 14 14 chr15 100499377 100499447 -2995527 - ID_B1 SINE B4 -27 197 128 1 1351 1361 84 16 21 chr15 100500670 100500864 -2994110 + B2_Mm2 SINE B2 2 194 -1 1 1351 1447 89 16 5 chr15 100501632 100501825 -2993149 + B2_Mm2 SINE B2 1 195 0 2 1351 213 214 0 0 chr15 100501905 100501947 -2993027 + A-rich Low_complexity Low_complexity 4 45 0 3 1351 530 183 58 0 chr15 100502152 100502256 -2992718 - PB1D7 SINE Alu -10 110 1 4 1351 446 277 80 0 chr15 100503362 100503499 -2991475 + B3A SINE B2 17 164 -34 5 1351 683 175 80 5 chr15 100503682 100503860 -2991114 - B3 SINE B2 0 198 2 6 1351 222 115 19 37 chr15 100504272 100504326 -2990648 + C-rich Low_complexity Low_complexity 2 54 0 7 1351 369 286 0 0 chr15 100504974 100505051 -2989923 - ID4 SINE ID -5 78 2 8 1351 510 17 0 0 chr15 100505986 100506045 -2988929 + (GGGA)n Simple_repeat Simple_repeat 4 62 0 9 1351 268 231 62 0 chr15 100506329 100506394 -2988580 - RSINE1 SINE B4 -44 121 53 1 1351 638 274 80 0 chr15 100506559 100506734 -2988240 + B3 SINE B2 1 189 -27 1 1351 25 0 0 0 chr15 100506767 100506792 -2988182 + AT_rich Low_complexity Low_complexity 1 25 0 1 1351 623 211 31 44 chr15 100506793 100506952 -2988022 - B3A SINE B2 -41 157 1 1 1351 288 269 190 23 chr15 100507035 100507134 -2987840 + B1F SINE Alu 2 112 -5 1 1351 1436 57 23 0 chr15 100507265 100507441 -2987533 + B2_Mm2 SINE B2 2 181 -14 1 1351 409 80 0 12 chr15 100507469 100507569 -2987405 + B2_Mm2 SINE B2 47 181 -14 1 1351 673 285 130 31 chr15 100507603 100507827 -2987147 + B4 SINE B4 6 253 -39 1 1351 761 197 0 0 chr15 100507827 100507959 -2987015 + B1_Mur4 SINE Alu 1 132 -18 1 1351 673 285 130 31 chr15 100507959 100507995 -2986979 + B4 SINE B4 254 291 -1 1 1351 638 252 15 0 chr15 100508179 100508310 -2986664 - B3 SINE B2 -6 210 78 1 1351 351 0 0 0 chr15 100508448 100508487 -2986487 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1351 748 139 64 28 chr15 100508877 100509018 -2985956 - B1_Mur1 SINE Alu -2 147 2 2 1351 452 293 45 77 chr15 100510358 100510580 -2984394 - ID_B1 SINE B4 -1 223 9 2 1351 302 284 0 36 chr15 100510610 100510694 -2984280 - MER58B DNA MER1_type -241 100 20 2 1351 186 219 0 0 chr15 100511419 100511460 -2983514 + L3 LINE CR1 4443 4483 -6 2 1351 458 61 15 0 chr15 100512002 100512068 -2982906 + (TCCC)n Simple_repeat Simple_repeat 4 70 0 2 1351 250 272 131 36 chr15 100512073 100512157 -2982817 - PB1 SINE Alu -2 125 34 2 1351 502 140 10 10 chr15 100512177 100512278 -2982696 + CT-rich Low_complexity Low_complexity 2 102 0 2 1351 595 171 115 8 chr15 100512279 100512409 -2982565 - B1_Mur2 SINE Alu -5 144 1 2 1351 508 162 0 0 chr15 100512458 100512538 -2982436 + B3A SINE B2 1 80 -118 2 1351 180 0 0 0 chr15 100512633 100512653 -2982321 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1351 1225 41 0 7 chr15 100512661 100512808 -2982166 - B1_Mus1 SINE Alu -1 147 2 3 1351 230 0 0 103 chr15 100513261 100513300 -2981674 + (TGGGGG)n Simple_repeat Simple_repeat 2 36 0 3 1351 369 189 151 19 chr15 100513462 100513572 -2981402 + B3A SINE B2 7 127 -71 3 1351 342 0 0 0 chr15 100513579 100513617 -2981357 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1351 23 0 0 0 chr15 100513732 100513755 -2981219 + AT_rich Low_complexity Low_complexity 1 23 0 3 1351 317 250 0 89 chr15 100514038 100514139 -2980835 - ID_B1 SINE B4 -1 223 132 3 1351 363 221 52 73 chr15 100514294 100514410 -2980564 + PB1D9 SINE Alu 10 120 0 3 1351 1443 72 0 49 chr15 100514410 100514614 -2980360 + B2_Mm2 SINE B2 2 195 0 3 1351 225 296 25 140 chr15 100514614 100514654 -2980320 + B1_Mur3 SINE Alu 119 148 -1 3 1351 871 162 7 20 chr15 100516095 100516246 -2978728 + B1_Mur4 SINE Alu 2 150 0 3 1351 21 0 0 0 chr15 100516301 100516322 -2978652 + AT_rich Low_complexity Low_complexity 1 21 0 4 1351 376 264 112 107 chr15 100516752 100516829 -2978145 + B4 SINE B4 24 181 -111 4 1351 532 178 16 25 chr15 100516829 100516950 -2978024 + B1F2 SINE Alu 29 148 -1 4 1351 376 264 112 107 chr15 100516950 100516985 -2977989 + B4 SINE B4 182 257 -35 4 1351 660 91 0 0 chr15 100517186 100517296 -2977678 + (TC)n Simple_repeat Simple_repeat 1 110 0 4 1351 243 0 0 0 chr15 100517296 100517322 -2977652 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 1351 683 236 12 18 chr15 100518595 100518759 -2976215 + RSINE1 SINE B4 3 165 0 4 1351 1437 35 39 22 chr15 100518794 100518972 -2976002 + B2_Mm2 SINE B2 1 181 -14 4 1351 488 134 10 0 chr15 100519677 100519774 -2975200 + (TCC)n Simple_repeat Simple_repeat 1 98 0 4 1351 210 304 0 42 chr15 100519985 100520057 -2974917 + PB1D10 SINE Alu 2 70 -47 4 1351 1875 168 74 41 chr15 100520448 100520815 -2974159 - RLTR30 LTR ERV1 0 379 1 4 1351 220 233 0 0 chr15 100520887 100520930 -2974044 + PB1D10 SINE Alu 70 112 -5 4 1351 351 173 66 13 chr15 100521295 100521371 -2973603 + ORSL DNA Tip100 25 104 -171 5 1351 423 309 63 52 chr15 100521425 100521616 -2973358 - ID_B1 SINE B4 -28 196 4 5 1351 814 277 49 5 chr15 100521646 100521849 -2973125 - B3 SINE B2 -1 215 4 5 1351 587 126 38 19 chr15 100521865 100521970 -2973004 - B1_Mur1 SINE Alu -1 148 42 5 1351 190 314 0 41 chr15 100522630 100522703 -2972271 + MIRm SINE MIR 53 122 -154 5 1351 336 327 9 9 chr15 100522797 100522905 -2972069 - PB1D10 SINE Alu -9 108 1 5 1351 231 307 108 8 chr15 100524286 100524447 -2970527 + MIRc SINE MIR 3 184 -92 5 1351 858 189 0 0 chr15 100524728 100524908 -2970066 + GA-rich Low_complexity Low_complexity 1 180 0 5 1351 415 252 86 9 chr15 100525406 100525522 -2969452 - B1F2 SINE Alu -20 129 5 5 1351 1539 48 16 5 chr15 100525651 100525839 -2969135 - B2_Mm2 SINE B2 -5 190 1 5 1351 1352 211 124 82 chr15 100525987 100526331 -2968643 + MTD LTR MaLR 1 353 -66 6 1351 860 164 7 0 chr15 100526331 100526471 -2968503 + B1_Mur3 SINE Alu 2 142 -7 6 1351 1352 211 124 82 chr15 100526471 100526528 -2968446 + MTD LTR MaLR 354 419 0 6 1351 218 257 8 96 chr15 100529962 100530087 -2964887 + GA-rich Low_complexity Low_complexity 2 115 0 6 1351 316 304 0 21 chr15 100531200 100531294 -2963680 - B1F SINE Alu 0 149 58 6 1351 444 306 83 54 chr15 100531392 100531668 -2963306 + B4A SINE B4 1 284 -8 6 1351 1080 143 40 0 chr15 100531899 100532074 -2962900 + URR1A DNA MER1_type 45 226 0 6 1351 432 0 0 0 chr15 100532086 100532134 -2962840 + (TTTTG)n Simple_repeat Simple_repeat 5 52 0 6 168 372 241 138 0 chr15 100532135 100532251 -2962723 - ID_B1 SINE B4 -12 212 81 6 1352 388 246 45 18 chr15 100532547 100532659 -2962315 - B1F SINE Alu -8 141 27 6 1352 382 113 141 0 chr15 100532660 100532731 -2962243 + MTC LTR MaLR 1 81 -340 6 1352 1450 89 16 10 chr15 100532731 100532923 -2962051 + B2_Mm2 SINE B2 1 193 -2 7 1352 681 101 0 0 chr15 100532925 100533024 -2961950 + (GAAA)n Simple_repeat Simple_repeat 3 101 0 7 1352 1491 132 19 60 chr15 100533028 100533295 -2961679 + MTC LTR MaLR 158 413 -8 6 1352 418 239 86 26 chr15 100535219 100535335 -2959639 - B1_Mur3 SINE Alu -26 123 1 7 1352 1236 54 0 0 chr15 100535404 100535551 -2959423 + B1_Mus2 SINE Alu 1 147 0 7 1352 531 31 0 0 chr15 100535557 100535622 -2959352 + (TG)n Simple_repeat Simple_repeat 1 65 0 7 1352 453 264 90 8 chr15 100535641 100535763 -2959211 - B3A SINE B2 -65 133 2 7 1352 187 281 35 0 chr15 100535923 100535980 -2958994 - MIR SINE MIR -18 244 186 7 1352 184 118 88 0 chr15 100536031 100536065 -2958909 - L2a LINE L2 -14 3412 3376 7 1352 187 188 125 0 chr15 100537954 100538002 -2956972 + L2 LINE L2 2410 2463 -956 7 1352 732 91 9 9 chr15 100538245 100538356 -2956618 + B1_Mus1 SINE Alu 38 148 0 7 1352 237 254 40 40 chr15 100538428 100538502 -2956472 - ID4 SINE ID -9 74 1 8 1352 240 86 0 0 chr15 100538556 100538591 -2956383 + (T)n Simple_repeat Simple_repeat 1 35 0 8 1352 750 200 56 82 chr15 100538612 100538808 -2956166 - B3 SINE B2 -19 197 7 8 1352 603 301 7 7 chr15 100538849 100539003 -2955971 - ID_B1 SINE B4 -70 154 1 8 1352 257 181 13 0 chr15 100539093 100539169 -2955805 - FAM SINE Alu -3 312 261 8 1352 355 239 0 0 chr15 100539581 100539652 -2955322 + B3 SINE B2 1 71 -145 8 1352 794 196 76 0 chr15 100539670 100539828 -2955146 + B3 SINE B2 46 215 -1 8 1352 562 126 0 19 chr15 100539831 100539936 -2955038 + (GGA)n Simple_repeat Simple_repeat 1 103 0 8 1352 587 234 65 35 chr15 100539986 100540194 -2954780 + B3A SINE B2 10 214 -2 8 1352 279 0 0 0 chr15 100540242 100540273 -2954701 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 1352 1556 47 0 5 chr15 100540295 100540486 -2954488 + B2_Mm1t SINE B2 3 192 -1 8 1352 1483 198 73 116 chr15 100540559 100540982 -2953992 + MTD LTR MaLR 15 419 0 9 1352 402 282 37 92 chr15 100541007 100541171 -2953803 + MTC-int LTR MaLR 92 246 -1012 9 1352 3249 216 88 45 chr15 100541174 100542031 -2952943 + MTC-int LTR MaLR 153 1045 -213 9 1352 582 279 194 8 chr15 100542323 100542463 -2952511 + MTE2a LTR MaLR 61 222 -157 9 1352 983 139 48 43 chr15 100542463 100542651 -2952323 - B2_Mm2 SINE B2 -6 189 1 9 1352 216 97 0 0 chr15 100542651 100542682 -2952292 + (CTTG)n Simple_repeat Simple_repeat 4 34 0 9 1352 180 0 0 0 chr15 100542685 100542705 -2952269 + (TC)n Simple_repeat Simple_repeat 2 21 0 9 1352 582 279 194 8 chr15 100542705 100542801 -2952173 + MTE2a LTR MaLR 223 343 -36 9 1352 1084 216 39 0 chr15 100542815 100543019 -2951955 - B3 SINE B2 -4 212 1 9 1352 220 265 0 14 chr15 100543102 100543171 -2951803 + C-rich Low_complexity Low_complexity 1 68 0 9 1352 325 269 0 13 chr15 100543971 100544050 -2950924 - RSINE1 SINE B4 -85 80 3 9 1352 355 313 16 57 chr15 100545380 100545502 -2949472 - PB1D10 SINE Alu 0 117 1 9 1352 567 200 64 0 chr15 100547240 100547350 -2947624 - PB1D10 SINE Alu 0 117 1 1 1352 737 184 15 8 chr15 100547513 100547780 -2947194 + (CATATA)n Simple_repeat Simple_repeat 1 269 0 1 1352 1294 109 16 5 chr15 100547800 100547984 -2946990 - B2_Mm2 SINE B2 -8 187 2 1 1352 739 115 0 17 chr15 100547998 100548113 -2946861 - B1_Mur4 SINE Alu 0 150 38 1 1352 289 343 74 0 chr15 100548120 100548228 -2946746 - PB1D10 SINE Alu -1 116 1 1 1352 440 292 25 38 chr15 100548582 100548742 -2946232 + MIRb SINE MIR 90 247 -21 1 1352 977 204 60 0 chr15 100549113 100549314 -2945660 + B3 SINE B2 1 213 -3 1 1352 1450 50 44 0 chr15 100549314 100549493 -2945481 - B2_Mm2 SINE B2 -6 189 2 1 1352 22 0 0 0 chr15 100549493 100549515 -2945459 + AT_rich Low_complexity Low_complexity 1 22 0 1 1352 882 247 0 0 chr15 100551300 100551482 -2943492 + B3 SINE B2 24 205 -11 1 1352 433 320 26 26 chr15 100551495 100551649 -2943325 + ID_B1 SINE B4 63 216 -8 1 1352 608 219 55 0 chr15 100551523 100551651 -2943323 + B1_Mm SINE Alu 10 144 -3 1 1352 272 163 77 0 chr15 100551656 100551731 -2943243 + ID4 SINE ID 4 92 -60 1 1352 719 232 137 0 chr15 100551969 100552159 -2942815 + ID_B1 SINE B4 1 216 -8 1 1352 277 323 0 39 chr15 100552418 100552521 -2942453 - BC1_Mm scRNA scRNA -49 103 5 1 1352 692 218 0 6 chr15 100553439 100553619 -2941355 + CT-rich Low_complexity Low_complexity 2 180 0 1 1352 664 193 9 0 chr15 100553635 100553851 -2941123 + CT-rich Low_complexity Low_complexity 1 218 0 1 1352 793 189 0 6 chr15 100554742 100555099 -2939875 + (TG)n Simple_repeat Simple_repeat 1 354 0 1 1352 219 36 0 0 chr15 100555397 100555425 -2939549 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1352 495 228 24 24 chr15 100555441 100555567 -2939407 + B3A SINE B2 3 128 -70 1 1352 477 0 0 0 chr15 100555567 100555620 -2939354 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 1352 408 40 0 0 chr15 100555620 100555669 -2939305 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1352 581 273 145 16 chr15 100555743 100555929 -2939045 + B3 SINE B2 7 216 0 1 1352 279 190 7 52 chr15 100556290 100556445 -2938529 + (TATG)n Simple_repeat Simple_repeat 2 149 0 1 1352 291 170 51 25 chr15 100556474 100556631 -2938343 + (TG)n Simple_repeat Simple_repeat 1 161 0 1 1352 387 215 26 9 chr15 100556654 100556885 -2938089 + (TG)n Simple_repeat Simple_repeat 1 235 0 1 1352 220 250 26 13 chr15 100556828 100556905 -2938069 + (TATG)n Simple_repeat Simple_repeat 3 80 0 1 1352 413 171 27 20 chr15 100556905 100557054 -2937920 + (TG)n Simple_repeat Simple_repeat 1 150 0 1 1352 243 219 92 40 chr15 100557158 100557234 -2937740 - LTR88c LTR Genie? -545 317 238 1 1352 319 244 51 0 chr15 100557675 100557735 -2937239 - PB1 SINE Alu -28 99 36 1 1352 532 206 0 186 chr15 100557735 100557896 -2937078 + B1_Mur1 SINE Alu 1 131 -18 1 1352 422 171 0 0 chr15 100557897 100557967 -2937007 + B1F SINE Alu 71 140 -9 1 1352 289 311 38 38 chr15 100558010 100558167 -2936807 + YREP_Mm Unknown Unknown 151 307 -1505 1 1352 942 242 16 16 chr15 100558037 100558226 -2936748 - ID_B1 SINE B4 -3 221 33 1 1352 216 221 111 56 chr15 100558173 100558245 -2936729 - BC1_Mm scRNA scRNA -71 81 6 1 1352 195 250 0 22 chr15 100558351 100558396 -2936578 - MIR SINE MIR -104 104 61 1 1352 198 0 0 0 chr15 100558912 100558934 -2936040 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 1352 446 198 29 10 chr15 100560374 100560476 -2934498 + PB1D10 SINE Alu 13 116 -1 1 1352 392 235 94 65 chr15 100560638 100560825 -2934149 - B3A SINE B2 -10 183 2 1 1352 316 181 59 69 chr15 100560920 100561021 -2933953 - RMER19C LTR ERVK -18 593 494 1 1352 289 195 110 0 chr15 100560993 100561075 -2933899 - RMER4B LTR ERVK -133 452 362 1 1352 203 0 37 0 chr15 100561083 100561110 -2933864 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1352 318 336 0 51 chr15 100561148 100561286 -2933688 - ID_B1 SINE B4 -46 178 48 1 1352 241 238 165 37 chr15 100561270 100561379 -2933595 + B1F SINE Alu 26 148 -1 1 1352 427 320 192 10 chr15 100562035 100562069 -2932905 - B4 SINE B4 0 292 252 1 1352 468 0 0 0 chr15 100562069 100562121 -2932853 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 1 1352 727 215 0 0 chr15 100562125 100562246 -2932728 - B1_Mus1 SINE Alu -16 132 12 1 1352 427 320 192 10 chr15 100562246 100562264 -2932710 - B4 SINE B4 -41 247 80 1 1352 391 214 139 30 chr15 100562264 100562365 -2932609 - PB1D7 SINE Alu -8 112 1 1 1352 427 320 192 10 chr15 100562365 100562394 -2932580 - B4 SINE B4 -213 79 48 1 1352 613 250 30 0 chr15 100562580 100562712 -2932262 + ID_B1 SINE B4 82 217 -7 1 1352 453 281 82 0 chr15 100562719 100562865 -2932109 + RSINE1 SINE B4 3 160 -5 1 1352 262 239 111 14 chr15 100563424 100563496 -2931478 + RSINE1 SINE B4 2 80 -85 1 1352 663 185 48 60 chr15 100563552 100563719 -2931255 + B2_Mm2 SINE B2 23 187 -8 1 1352 234 268 18 18 chr15 100563713 100563770 -2931204 + ID_B1 SINE B4 134 190 -34 1 1352 409 228 169 11 chr15 100563779 100563905 -2931069 + ID_B1 SINE B4 82 221 -3 1 1352 548 0 30 0 chr15 100564038 100564105 -2930869 + (TTCC)n Simple_repeat Simple_repeat 3 71 0 1 1352 248 221 13 105 chr15 100564128 100564182 -2930792 - PB1D10 SINE Alu -2 115 66 1 1352 1804 162 65 27 chr15 100564182 100564550 -2930424 - RLTR14 LTR ERV1 0 382 1 1 1352 248 221 13 105 chr15 100564550 100564571 -2930403 - PB1D10 SINE Alu -52 65 47 1 1352 317 289 44 11 chr15 100564747 100564838 -2930136 + MER96B DNA hAT 4 97 -320 1 1352 450 308 46 0 chr15 100564848 100564978 -2929996 - B1F2 SINE Alu -12 137 2 1 1352 285 235 103 87 chr15 100565001 100565127 -2929847 + MT2B LTR ERVL 151 278 -323 1 1352 624 146 96 44 chr15 100565020 100565156 -2929818 + B1_Mus1 SINE Alu 6 148 0 1 1352 1610 37 16 0 chr15 100565158 100565347 -2929627 + B2_Mm1a SINE B2 2 193 0 1 1352 1240 21 21 0 chr15 100565498 100565642 -2929332 + B1_Mm SINE Alu 1 147 0 1 1352 387 0 0 0 chr15 100565642 100565685 -2929289 + (A)n Simple_repeat Simple_repeat 1 43 0 1 1352 207 0 0 0 chr15 100565685 100565708 -2929266 + (GA)n Simple_repeat Simple_repeat 2 24 0 1 1352 229 239 13 66 chr15 100566001 100566077 -2928897 + ID4_ SINE ID 6 77 -6 1 1352 1161 254 109 26 chr15 100566453 100566666 -2928308 + MTD LTR MaLR 44 281 -138 1 1352 643 227 88 238 chr15 100566666 100566827 -2928147 - ORR1D2 LTR MaLR -1 369 261 1 1352 1275 41 0 0 chr15 100566827 100566974 -2928000 + B1_Mus1 SINE Alu 2 148 0 1 1352 643 227 88 238 chr15 100566974 100567216 -2927758 - ORR1D2 LTR MaLR -110 260 28 1 1352 836 94 16 0 chr15 100567216 100567343 -2927631 + (TTCC)n Simple_repeat Simple_repeat 3 131 0 1 1352 1342 62 22 11 chr15 100567343 100567524 -2927450 - B2_Mm2 SINE B2 -10 185 3 1 1352 643 227 88 238 chr15 100567524 100567551 -2927423 - ORR1D2 LTR MaLR -343 27 3 1 1352 1161 254 109 26 chr15 100567551 100567684 -2927290 + MTD LTR MaLR 282 419 0 1 1352 444 19 0 0 chr15 100567754 100567807 -2927167 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1352 485 279 7 28 chr15 100568430 100568574 -2926400 + B3A SINE B2 1 141 -57 1 1352 378 0 0 0 chr15 100568574 100568616 -2926358 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1352 1076 133 4 186 chr15 100569228 100569486 -2925488 + URR1A DNA MER1_type 16 226 0 1 1352 1162 62 7 0 chr15 100569577 100569721 -2925253 - B1_Mus2 SINE Alu -1 146 2 1 1352 883 161 0 75 chr15 100569725 100569886 -2925088 - B1_Mur4 SINE Alu -1 149 1 1 1352 1903 157 77 6 chr15 100570653 100570817 -2924157 + MurERV4-int LTR ERVK 1851 2038 -3222 1 1352 333 0 0 0 chr15 100570817 100570854 -2924120 + (GA)n Simple_repeat Simple_repeat 1 37 0 1 1352 1903 157 77 6 chr15 100570854 100571054 -2923920 + MurERV4-int LTR ERVK 2039 2240 -3020 1 1352 1121 163 52 52 chr15 100571063 100571315 -2923659 + ORR1B1 LTR MaLR 12 263 -131 1 1352 11172 130 36 42 chr15 100571315 100571975 -2922999 + MurERV4-int LTR ERVK 3035 3673 -1587 1 1352 1463 74 21 0 chr15 100571975 100572165 -2922809 - B2_Mm2 SINE B2 -1 194 1 1 1352 11172 130 36 42 chr15 100572165 100573349 -2921625 + MurERV4-int LTR ERVK 3674 4854 -406 1 1352 1443 90 0 0 chr15 100573349 100573538 -2921436 + B2_Mm1a SINE B2 1 189 -4 1 1352 11172 130 36 42 chr15 100573538 100573764 -2921210 + MurERV4-int LTR ERVK 4855 5092 -168 1 1352 1952 165 10 82 chr15 100573764 100574167 -2920807 + ORR1B1 LTR MaLR 13 386 -8 1 1352 536 266 12 108 chr15 100574216 100574381 -2920593 + MYSERV-int LTR ERVK 4523 4680 -1870 1 1352 207 0 0 0 chr15 100574381 100574404 -2920570 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 1 1352 1253 48 0 0 chr15 100574407 100574553 -2920421 - B1_Mus1 SINE Alu -1 147 2 1 1352 536 266 12 108 chr15 100574553 100574623 -2920351 + MYSERV-int LTR ERVK 4681 4739 -1811 1 1352 1407 98 0 10 chr15 100574623 100574819 -2920155 + B2_Mm2 SINE B2 2 195 0 1 1352 265 196 0 0 chr15 100574881 100574932 -2920042 + MYSERV-int LTR ERVK 5078 5128 -652 1 1352 1238 238 46 13 chr15 100575253 100575560 -2919414 + MYSERV-int LTR ERVK 4810 5126 -1424 1 1352 604 230 25 80 chr15 100575560 100575759 -2919215 + RMER4A LTR ERVK 250 437 -29 1 1352 4564 179 45 62 chr15 100575790 100576913 -2918061 + MYSERV6-int LTR ERVK 7856 8959 0 1 1352 991 245 189 39 chr15 100576921 100577373 -2917601 + RMER4B LTR ERVK 17 467 -118 1 1352 241 64 42 21 chr15 100577376 100577424 -2917550 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1 1352 519 226 188 27 chr15 100577438 100577624 -2917350 - B4 SINE B4 -62 230 15 1 1352 225 0 0 0 chr15 100577645 100577670 -2917304 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 1 1352 451 236 18 37 chr15 100577670 100577833 -2917141 + (TCCCG)n Simple_repeat Simple_repeat 2 161 0 1 1352 291 238 88 26 chr15 100577905 100578074 -2916900 - L1M2 LINE L1 -1121 5019 4787 1 1352 1354 186 84 17 chr15 100578226 100578582 -2916392 + RMER17C LTR ERVK 1 380 -30 1 1352 300 27 0 0 chr15 100578586 100578623 -2916351 + (TC)n Simple_repeat Simple_repeat 1 37 0 1 1352 313 179 15 0 chr15 100578646 100578713 -2916261 - L1M2 LINE L1 -1498 4645 4578 1 1352 1079 293 75 102 chr15 100579271 100579536 -2915438 - RLTR18B LTR ERVK -3 509 234 1 1352 1190 54 163 0 chr15 100579536 100579702 -2915272 + B2_Mm2 SINE B2 2 194 -1 1 1352 1079 293 75 102 chr15 100579702 100579956 -2915018 - RLTR18B LTR ERVK -279 233 4 1 1352 666 0 0 0 chr15 100580165 100580239 -2914735 + (TC)n Simple_repeat Simple_repeat 1 74 0 1 1352 1349 209 51 134 chr15 100580857 100581222 -2913752 - MTD LTR MaLR -12 407 72 1 1352 847 59 70 128 chr15 100581222 100581378 -2913596 - B1_Mm SINE Alu 0 147 1 1 1352 1349 230 40 128 chr15 100581378 100581468 -2913506 - MTD LTR MaLR -326 81 1 1 1352 706 319 63 8 chr15 100581631 100581868 -2913106 + B4A SINE B4 39 288 -4 2 1352 210 258 0 0 chr15 100581874 100581936 -2913038 + (CATA)n Simple_repeat Simple_repeat 1 62 0 2 1352 390 216 34 11 chr15 100581938 100582027 -2912947 + B3 SINE B2 118 208 -8 2 1352 185 0 0 39 chr15 100582065 100582091 -2912883 + (TAA)n Simple_repeat Simple_repeat 3 27 0 2 1352 559 65 361 0 chr15 100582235 100582343 -2912631 - B2_Mm2 SINE B2 -2 193 47 2 1352 218 171 24 0 chr15 100582307 100582348 -2912626 - B4 SINE B4 -210 82 41 2 1352 1295 91 28 0 chr15 100582372 100582548 -2912426 - B2_Mm2 SINE B2 -14 181 1 2 1352 183 42 0 0 chr15 100582558 100582582 -2912392 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 1352 1234 55 0 0 chr15 100582583 100582729 -2912245 - B1_Mus1 SINE Alu 0 148 3 2 1352 1007 94 29 0 chr15 100582850 100582988 -2911986 + B1_Mus2 SINE Alu 5 146 -1 2 1352 464 191 63 54 chr15 100583069 100583180 -2911794 - B1F2 SINE Alu -3 146 6 2 1352 347 245 63 9 chr15 100583527 100583638 -2911336 - PB1D10 SINE Alu 0 117 1 2 1352 502 211 19 19 chr15 100584132 100584238 -2910736 + BC1_Mm scRNA scRNA 1 106 -46 2 1352 625 193 0 0 chr15 100584430 100584539 -2910435 - B1_Mur2 SINE Alu -7 142 34 2 1352 973 189 118 43 chr15 100584549 100584804 -2910170 - MTD LTR MaLR -132 287 14 2 1352 671 187 3 3 chr15 100585027 100585361 -2909613 + CT-rich Low_complexity Low_complexity 1 334 0 2 1352 407 244 0 12 chr15 100586336 100586419 -2908555 + ID SINE ID 2 83 -141 2 1352 234 0 0 0 chr15 100586422 100586448 -2908526 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 1352 515 228 3 20 chr15 100586657 100587312 -2907662 + (CA)n Simple_repeat Simple_repeat 1 643 0 2 1352 341 270 55 72 chr15 100587708 100587892 -2907082 + MIRc SINE MIR 30 204 -64 2 1352 282 307 91 42 chr15 100588396 100588539 -2906435 + L2b LINE L2 3206 3355 -20 2 1352 263 299 118 3 chr15 100588563 100588671 -2906303 + MIR SINE MIR 54 175 -93 2 1352 1146 61 7 13 chr15 100588780 100588929 -2906045 - B1_Mus1 SINE Alu 0 148 1 2 1352 282 56 0 0 chr15 100588931 100588967 -2906007 + (TTA)n Simple_repeat Simple_repeat 3 38 0 2 1352 1724 77 139 0 chr15 100589001 100589260 -2905714 + ORR1A2 LTR MaLR 1 295 -32 2 1352 1026 52 22 0 chr15 100589258 100589394 -2905580 + B1_Mus1 SINE Alu 10 148 0 2 1352 1339 71 49 0 chr15 100589615 100589798 -2905176 - B2_Mm2 SINE B2 -1 194 3 2 1352 574 340 6 6 chr15 100589947 100590107 -2904867 - RSINE1 SINE B4 -3 162 3 2 1352 1223 61 0 12 chr15 100590280 100590445 -2904529 + B2_Mm2 SINE B2 3 165 -30 2 1352 975 271 24 41 chr15 100590521 100590586 -2904388 - B4A SINE B4 -4 288 225 2 1352 347 0 23 0 chr15 100590586 100590629 -2904345 + (TTG)n Simple_repeat Simple_repeat 2 45 0 2 1352 1111 66 7 0 chr15 100590629 100590766 -2904208 - B1_Mus1 SINE Alu -10 138 1 2 1352 832 283 5 0 chr15 100590769 100590981 -2903993 - B3 SINE B2 0 216 4 2 1352 975 271 24 41 chr15 100590981 100591203 -2903771 - B4A SINE B4 -68 224 4 2 1352 381 276 51 0 chr15 100591283 100591381 -2903593 - PB1D10 SINE Alu -5 112 10 2 1352 450 323 67 22 chr15 100592942 100593134 -2901840 + MIRc SINE MIR 4 199 -69 2 1352 275 307 70 35 chr15 100593236 100593408 -2901566 - L2 LINE L2 -2691 728 551 2 1352 287 253 65 0 chr15 100593570 100593676 -2901298 - ID2 SINE ID -33 119 9 2 1352 216 111 0 0 chr15 100593693 100593729 -2901245 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1352 279 279 275 36 chr15 100593773 100593940 -2901034 - B4A SINE B4 -62 230 24 2 1352 479 202 67 0 chr15 100593973 100594062 -2900912 + PB1D10 SINE Alu 23 117 0 2 1352 252 367 139 11 chr15 100594923 100595204 -2899770 + L2b LINE L2 2766 3082 -337 2 1352 194 349 91 23 chr15 100595830 100595962 -2899012 - MIR SINE MIR -25 237 97 2 1352 280 329 0 0 chr15 100596423 100596499 -2898475 + ID_B1 SINE B4 82 157 -67 2 1352 537 255 26 46 chr15 100596500 100596652 -2898322 + RSINE1 SINE B4 11 159 -6 2 1352 540 204 216 1 chr15 100596728 100596858 -2898116 + B3 SINE B2 8 163 -53 2 1352 396 0 0 0 chr15 100596858 100596902 -2898072 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 1352 405 86 0 0 chr15 100596902 100596959 -2898015 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1352 479 246 70 97 chr15 100596959 100597012 -2897962 + B2_Mm2 SINE B2 150 186 -9 2 1352 277 176 39 0 chr15 100597010 100597061 -2897913 + ID_B1 SINE B4 145 197 -27 2 1352 204 312 78 0 chr15 100597206 100597270 -2897704 + L2b LINE L2 3307 3375 0 2 1352 1061 224 10 0 chr15 100597954 100598155 -2896819 - B3 SINE B2 -11 205 3 2 1352 505 248 20 0 chr15 100598180 100598281 -2896693 - PB1D10 SINE Alu -14 103 1 2 1352 235 272 9 132 chr15 100598188 100598294 -2896680 - MT2B2 LTR ERVL -337 247 155 2 1352 579 259 50 6 chr15 100599350 100599509 -2895465 - Lx9 LINE L1 -127 7517 7352 2 1352 645 199 4 92 chr15 100599825 100600038 -2894936 - B3A SINE B2 0 216 40 2 1352 338 237 0 26 chr15 100600275 100600353 -2894621 - Charlie24 DNA MER1_type -10 2440 2365 2 1352 476 195 126 20 chr15 100600979 100601117 -2893857 + PB1D9 SINE Alu 4 147 -2 2 1352 1026 174 66 5 chr15 100601216 100601413 -2893561 + B3 SINE B2 6 214 -2 2 1352 246 297 0 0 chr15 100601430 100601494 -2893480 + ID4_ SINE ID 17 80 -3 2 1352 378 238 12 0 chr15 100601685 100601765 -2893209 - B1F1 SINE Alu -17 132 52 2 1352 423 221 71 18 chr15 100602056 100602201 -2892773 - L1MC1 LINE L1 -293 6051 5900 2 1352 354 80 0 0 chr15 100602205 100602255 -2892719 + (TCC)n Simple_repeat Simple_repeat 2 51 0 2 1352 345 82 0 0 chr15 100602246 100602295 -2892679 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 1352 264 170 52 52 chr15 100602307 100602372 -2892602 - PB1D10 SINE Alu -48 79 18 2 1352 245 254 148 9 chr15 100602372 100602487 -2892487 - L1MC1 LINE L1 -581 5763 5633 2 1352 380 176 40 13 chr15 100602651 100602726 -2892248 + B1F SINE Alu 73 149 0 2 1352 706 224 47 47 chr15 100602981 100603173 -2891801 - B3A SINE B2 -6 192 1 2 1352 859 190 144 21 chr15 100603232 100603420 -2891554 - B3 SINE B2 0 216 6 2 1352 212 0 36 0 chr15 100603504 100603532 -2891442 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1352 233 211 177 15 chr15 100603594 100603724 -2891250 + Kanga2_a DNA Tc2 692 842 -46 2 1352 475 221 200 24 chr15 100604083 100604208 -2890766 - B1F2 SINE Alu 0 149 3 2 1352 237 115 37 37 chr15 100604209 100604263 -2890711 + T-rich Low_complexity Low_complexity 5 58 0 2 1352 1291 14 14 0 chr15 100604272 100604417 -2890557 - B1_Mus2 SINE Alu 0 147 1 2 1352 728 216 171 6 chr15 100604417 100604590 -2890384 - B3A SINE B2 0 198 5 2 1352 360 0 0 0 chr15 100604592 100604632 -2890342 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1352 200 291 45 64 chr15 100604828 100604938 -2890036 + MIRc SINE MIR 88 195 -73 2 1352 321 296 58 32 chr15 100605169 100605318 -2889656 + MIRc SINE MIR 30 181 -27 2 1352 342 0 0 0 chr15 100608073 100608111 -2886863 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1352 1157 51 0 0 chr15 100609546 100609684 -2885290 + B1_Mm SINE Alu 1 138 -9 2 1352 1289 258 57 64 chr15 100609938 100610361 -2884613 + MTC LTR MaLR 1 420 -1 2 1352 362 145 0 191 chr15 100611252 100611346 -2883628 + BC1_Mm scRNA scRNA 1 76 -76 2 1352 1005 84 14 0 chr15 100612237 100612379 -2882595 - B1_Mur4 SINE Alu 0 150 7 2 1352 254 311 88 97 chr15 100612489 100612590 -2882384 - MIR SINE MIR -34 228 122 2 1352 871 145 65 0 chr15 100612590 100612728 -2882246 + B1_Mus1 SINE Alu 2 148 0 2 1352 254 311 88 97 chr15 100612728 100612854 -2882120 - MIR SINE MIR -141 121 3 2 1352 237 246 0 0 chr15 100612985 100613050 -2881924 + C-rich Low_complexity Low_complexity 3 67 0 2 1352 1263 161 25 0 chr15 100613790 100613989 -2880985 - B3 SINE B2 -11 205 2 2 1352 537 203 409 7 chr15 100614694 100614848 -2880126 + B3 SINE B2 1 216 0 2 1352 275 266 99 18 chr15 100615358 100615469 -2879505 + PB1D7 SINE Alu 1 120 0 2 1352 320 250 47 135 chr15 100615516 100615664 -2879310 + RSINE1 SINE B4 31 165 0 2 1352 270 0 0 0 chr15 100616368 100616398 -2878576 + (T)n Simple_repeat Simple_repeat 1 30 0 2 1352 437 218 49 10 chr15 100617040 100617142 -2877832 + PB1D10 SINE Alu 7 112 -5 2 1352 1247 34 7 0 chr15 100617277 100617423 -2877551 - B1_Mus2 SINE Alu 0 147 1 2 1352 616 242 40 20 chr15 100619023 100619175 -2875799 + RSINE1 SINE B4 11 165 0 2 1352 226 162 3 0 chr15 100620544 100620597 -2874377 - B1F1 SINE Alu -3 124 61 2 1352 313 276 20 10 chr15 100621032 100621131 -2873843 - PB1D7 SINE Alu -20 100 1 2 1352 243 0 0 0 chr15 100621236 100621263 -2873711 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 1352 468 0 0 0 chr15 100623114 100623166 -2871808 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 1352 1953 182 141 11 chr15 100623174 100623248 -2871726 - RLTR20C LTR ERVK -12 522 446 2 1352 198 91 0 0 chr15 100623248 100623281 -2871693 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 2 1352 1953 182 141 11 chr15 100623281 100623668 -2871306 - RLTR20C LTR ERVK -89 445 2 2 1352 595 169 16 33 chr15 100623993 100624115 -2870859 + PB1D9 SINE Alu 1 120 0 2 1352 210 382 52 46 chr15 100625298 100625471 -2869503 + L2 LINE L2 2729 2902 -517 2 1352 221 242 45 0 chr15 100625657 100625723 -2869251 + L2a LINE L2 3316 3384 -42 2 1352 1183 173 24 19 chr15 100627242 100627454 -2867520 - B3 SINE B2 -2 214 2 2 1352 357 273 73 0 chr15 100627454 100627564 -2867410 - B1F SINE Alu -2 147 30 3 1352 748 161 43 14 chr15 100627623 100627762 -2867212 - B1_Mur4 SINE Alu 0 150 8 3 1352 1493 50 28 0 chr15 100627784 100627965 -2867009 - B2_Mm2 SINE B2 -8 187 2 3 1352 345 100 0 0 chr15 100628879 100628929 -2866045 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1352 865 189 7 13 chr15 100628945 100629100 -2865874 - RSINE1 SINE B4 -9 156 3 3 1352 333 306 46 13 chr15 100629262 100629378 -2865596 - PB1 SINE Alu -7 120 7 3 1352 517 198 0 19 chr15 100629383 100629491 -2865483 - L1MA5 LINE L1 -2 6298 6193 3 1352 335 321 144 67 chr15 100629517 100629787 -2865187 - B4 SINE B4 0 292 2 3 1352 417 254 98 23 chr15 100630295 100630428 -2864546 + B1F SINE Alu 4 146 -3 3 1352 206 122 61 0 chr15 100631440 100631489 -2863485 + (CCTG)n Simple_repeat Simple_repeat 4 55 0 3 1352 256 312 192 13 chr15 100631852 100632008 -2862966 + B2_Mm2 SINE B2 2 185 -10 3 1352 264 237 30 15 chr15 100632372 100632505 -2862469 + (CA)n Simple_repeat Simple_repeat 2 136 0 3 1352 229 276 68 88 chr15 100632868 100633015 -2861959 + B4 SINE B4 8 151 -141 3 1352 287 63 15 45 chr15 100634316 100634382 -2860592 + (TTTTG)n Simple_repeat Simple_repeat 3 66 0 3 1352 672 67 19 0 chr15 100634388 100634493 -2860481 - B1_Mus2 SINE Alu 0 147 41 3 1352 499 71 0 0 chr15 100634445 100634515 -2860459 - 4.5SRNA scRNA scRNA -8 86 17 3 1352 1956 180 80 10 chr15 100634513 100634928 -2860046 + RMER4A LTR ERVK 23 466 0 3 1352 241 274 15 114 chr15 100634928 100635058 -2859916 + MT2B LTR ERVL 153 269 -332 3 1352 566 204 0 26 chr15 100634957 100635073 -2859901 + B1_Mur1 SINE Alu 15 127 -22 3 1352 325 363 62 25 chr15 100635559 100635720 -2859254 - MER2 DNA MER2_type -58 287 121 3 1352 244 309 85 0 chr15 100638199 100638293 -2856681 - PB1D7 SINE Alu 0 120 19 3 1352 501 246 242 34 chr15 100638293 100638623 -2856351 - MTD LTR MaLR 0 419 1 3 1352 298 282 148 47 chr15 100638789 100638938 -2856036 + ID_B1 SINE B4 45 208 -16 3 1352 208 381 0 0 chr15 100639240 100639337 -2855637 + (TG)n Simple_repeat Simple_repeat 2 98 0 3 1352 243 364 59 29 chr15 100639516 100639550 -2855424 + B4 SINE B4 59 198 -94 3 1352 494 216 29 0 chr15 100639550 100639652 -2855322 + B1_Mur1 SINE Alu 5 109 -40 3 1352 551 239 36 0 chr15 100640120 100640258 -2854716 + RSINE1 SINE B4 3 145 -20 3 1352 551 244 17 86 chr15 100640283 100640458 -2854516 - RSINE1 SINE B4 -1 164 2 3 1352 315 236 0 0 chr15 100640592 100640664 -2854310 - B1F SINE Alu -6 143 72 3 1352 217 212 0 88 chr15 100641209 100641227 -2853747 - ID_B1 SINE B4 -77 147 119 3 1352 272 75 0 24 chr15 100641227 100641268 -2853706 - B1_Mus2 SINE Alu -95 52 13 3 1352 217 212 0 88 chr15 100641268 100641288 -2853686 - ID_B1 SINE B4 -77 118 83 3 1352 341 345 77 4 chr15 100641321 100641554 -2853420 - L1MB3 LINE L1 -10 6173 5924 3 1352 319 269 8 108 chr15 100641650 100641779 -2853195 + B3 SINE B2 101 216 0 3 1352 2026 143 88 16 chr15 100642499 100642875 -2852099 + MTC LTR MaLR 2 404 -17 3 1352 447 19 0 0 chr15 100642875 100642927 -2852047 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 1352 258 32 0 0 chr15 100642927 100642957 -2852017 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1352 199 341 194 18 chr15 100644449 100644619 -2850355 + MIRc SINE MIR 37 236 -32 3 1352 571 248 37 37 chr15 100648962 100649125 -2845849 - B3 SINE B2 0 216 54 3 1352 2360 136 50 77 chr15 100649125 100649603 -2845371 - RMER4A LTR ERVK 0 466 2 3 1352 1450 122 57 0 chr15 100649605 100649850 -2845124 - MurERV4-int LTR ERVK -1 5259 5001 3 1352 556 261 78 53 chr15 100649863 100650183 -2844791 - RLTR15 LTR ERVK -17 342 15 3 1352 896 154 95 11 chr15 100650183 100650373 -2844601 - MurERV4-int LTR ERVK -263 4997 4792 3 1352 459 167 0 12 chr15 100650353 100650438 -2844536 - MurERV4-int LTR ERVK -2771 2489 2406 3 1352 4578 184 44 22 chr15 100650468 100651813 -2843161 - MurERV4-int LTR ERVK -2821 2439 975 3 1352 4462 211 128 6 chr15 100651897 100652949 -2842025 - RMER12B LTR ERVK -201 1203 23 3 1352 469 172 0 41 chr15 100653051 100653148 -2841826 - RMER12B LTR ERVK -1310 94 2 3 1352 355 266 83 0 chr15 100653402 100653511 -2841463 - PB1D9 SINE Alu -2 118 1 3 1352 22 35 0 0 chr15 100653685 100653714 -2841260 + GC_rich Low_complexity Low_complexity 1 29 0 3 1352 805 186 147 11 chr15 100656191 100656381 -2838593 + B3 SINE B2 1 216 0 3 1352 507 120 56 9 chr15 100656604 100656725 -2838249 - ORR1B1 LTR MaLR -83 311 158 3 1352 411 183 104 19 chr15 100656873 100656979 -2837995 + MTD LTR MaLR 3 117 -302 3 1352 1419 79 26 10 chr15 100656981 100657173 -2837801 - B2_Mm2 SINE B2 0 195 1 3 1352 329 272 101 31 chr15 100657188 100657235 -2837739 + L1MCa LINE L1 1826 1872 -4636 3 1352 1191 41 0 46 chr15 100657235 100657388 -2837586 + B1_Mus2 SINE Alu 2 147 0 3 1352 329 272 101 31 chr15 100657388 100657469 -2837505 + L1MCa LINE L1 1873 1963 -4545 3 1352 318 180 0 0 chr15 100657471 100657532 -2837442 + (TATATG)n Simple_repeat Simple_repeat 2 62 0 3 1352 321 395 35 12 chr15 100657535 100657704 -2837270 - L1MD3 LINE L1 -1328 6667 6495 3 1352 794 251 181 9 chr15 100657774 100658066 -2836908 + MTD LTR MaLR 32 405 -14 3 1352 769 281 119 15 chr15 100659141 100659401 -2835573 - B4A SINE B4 0 292 6 3 1352 848 244 19 19 chr15 100659440 100659645 -2835329 + B3 SINE B2 1 205 -11 3 1352 965 276 32 32 chr15 100659807 100660088 -2834886 - B4A SINE B4 -1 291 11 3 1352 194 348 63 56 chr15 100660958 100661101 -2833873 - MIRm SINE MIR -99 177 34 3 1352 706 216 130 16 chr15 100661266 100661450 -2833524 - B3 SINE B2 -11 205 1 3 1352 254 333 30 10 chr15 100661588 100661688 -2833286 + MIR3 SINE MIR 101 202 -6 3 1352 414 0 0 0 chr15 100661857 100661903 -2833071 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1352 325 340 10 0 chr15 100662849 100662949 -2832025 - MIRb SINE MIR -91 177 77 3 1352 571 204 77 16 chr15 100662979 100663132 -2831842 + B3 SINE B2 2 168 -27 3 1353 331 209 116 0 chr15 100663865 100663951 -2831023 + B1F SINE Alu 53 148 -1 3 1353 305 230 95 0 chr15 100663949 100664023 -2830951 + ID SINE ID 1 81 -143 3 1353 180 0 0 0 chr15 100664400 100664420 -2830554 + (TCTG)n Simple_repeat Simple_repeat 1 20 0 3 1353 627 169 29 6 chr15 100664420 100664593 -2830381 + CT-rich Low_complexity Low_complexity 2 178 0 3 1353 379 212 0 0 chr15 100664594 100664660 -2830314 + C-rich Low_complexity Low_complexity 2 67 0 3 1353 923 121 0 7 chr15 100664770 100664912 -2830062 + B1_Mur4 SINE Alu 10 150 0 3 1353 508 286 49 80 chr15 100664933 100665321 -2829653 - RMER17C LTR ERVK -34 376 1 3 1353 860 212 0 0 chr15 100665653 100665799 -2829175 - B1_Mur2 SINE Alu -2 147 2 3 1353 247 323 11 0 chr15 100665800 100665893 -2829081 - L1MA9 LINE L1 -59 6253 6160 3 1353 1190 187 5 28 chr15 100665907 100666122 -2828852 + B3 SINE B2 4 213 -3 3 1353 703 170 24 0 chr15 100666651 100666816 -2828158 + (TCTA)n Simple_repeat Simple_repeat 2 170 0 3 1353 239 203 43 0 chr15 100666827 100666896 -2828078 + CT-rich Low_complexity Low_complexity 1 72 0 3 1353 183 114 0 0 chr15 100666920 100666955 -2828019 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 1353 3617 137 160 111 chr15 100667813 100668661 -2826313 - RMER19B LTR ERVK -12 890 1 3 1353 265 167 0 0 chr15 100668661 100668703 -2826271 - B1_Mur4 SINE Alu -107 43 2 3 1353 236 271 165 71 chr15 100668798 100668861 -2826113 - ID_B1 SINE B4 -2 222 159 3 1353 547 212 187 35 chr15 100668861 100669032 -2825942 - B3A SINE B2 0 198 2 3 1353 236 271 165 71 chr15 100669032 100669095 -2825879 - ID_B1 SINE B4 -66 158 85 3 1353 1023 243 82 32 chr15 100670228 100670568 -2824406 + ORSL-2b DNA Tip100 89 445 -63 3 1353 31 0 0 0 chr15 100670716 100670747 -2824227 + AT_rich Low_complexity Low_complexity 1 31 0 3 1353 354 237 285 13 chr15 100670758 100670993 -2823981 - L1MD3 LINE L1 -23 7972 7674 3 1353 2127 78 11 0 chr15 100671014 100671296 -2823678 + ORR1A2 LTR MaLR 1 285 -42 3 1353 707 49 0 10 chr15 100671296 100671400 -2823574 + L1_Mus1 LINE L1 6465 6567 0 3 1353 380 43 0 0 chr15 100671445 100671491 -2823483 + ORR1A2 LTR MaLR 273 318 -8 3 1353 318 307 76 25 chr15 100671620 100671777 -2823197 - L1MD3 LINE L1 -363 7632 7468 3 1353 509 260 98 35 chr15 100671819 100672111 -2822863 - L1MD3 LINE L1 -586 7199 6880 3 1353 228 277 0 30 chr15 100672113 100672180 -2822794 - MLT1A1 LTR MaLR -4 404 340 3 1353 892 273 112 12 chr15 100672208 100672531 -2822443 - MTE2b LTR MaLR -6 373 19 3 1353 683 267 144 79 chr15 100672539 100672942 -2822032 - MT2A LTR ERVL -11 522 94 3 1353 1191 76 0 6 chr15 100672948 100673107 -2821867 + B2_Mm2 SINE B2 1 158 -37 3 1353 353 252 20 29 chr15 100673146 100673248 -2821726 - MT2A LTR ERVL -432 101 1 3 1353 367 281 3 0 chr15 100673543 100673629 -2821345 - ID4 SINE ID -63 89 2 3 1353 351 233 0 0 chr15 100673691 100673794 -2821180 + (TG)n Simple_repeat Simple_repeat 2 104 0 3 1353 648 222 0 0 chr15 100673805 100673985 -2820989 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1353 503 179 57 0 chr15 100673993 100674099 -2820875 - B4 SINE B4 -72 220 109 3 1353 1211 131 18 72 chr15 100674100 100674322 -2820652 - ORR1C2 LTR MaLR -3 381 172 3 1353 739 101 50 17 chr15 100674330 100674572 -2820402 + (CAGAGA)n Simple_repeat Simple_repeat 1 250 0 3 1353 755 240 35 35 chr15 100674584 100674832 -2820142 - ORR1D1 LTR MaLR -133 245 2 3 1353 222 193 121 17 chr15 100674859 100674917 -2820057 - B4A SINE B4 -221 71 8 3 1353 386 191 134 32 chr15 100675086 100675193 -2819781 - PB1D10 SINE Alu -1 116 3 3 1353 229 214 36 0 chr15 100676927 100676983 -2817991 - L1MD3 LINE L1 -18 7977 7920 3 1353 276 253 120 90 chr15 100677130 100677146 -2817828 - B1F SINE Alu -21 128 118 3 1353 381 43 0 0 chr15 100677146 100677193 -2817781 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 1353 302 0 26 0 chr15 100677193 100677230 -2817744 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1353 276 253 120 90 chr15 100677230 100677312 -2817662 - B1F SINE Alu -32 117 27 3 1353 306 261 62 174 chr15 100677438 100677679 -2817295 - L1MC4 LINE L1 -955 7087 6874 3 1353 567 167 0 27 chr15 100677705 100677816 -2817158 + B1_Mur2 SINE Alu 6 113 -36 4 1353 560 274 22 0 chr15 100677788 100677923 -2817051 - B3A SINE B2 -35 163 26 4 1353 347 337 81 23 chr15 100678159 100678332 -2816642 - L1MC5 LINE L1 -767 7194 7012 4 1353 260 250 0 0 chr15 100678344 100678388 -2816586 + B1_Mus2 SINE Alu 4 47 -100 4 1353 209 100 0 48 chr15 100678391 100678433 -2816541 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 4 1353 225 196 41 61 chr15 100678741 100678888 -2816086 + (TATAA)n Simple_repeat Simple_repeat 3 146 0 4 1353 385 305 98 33 chr15 100678930 100679052 -2815922 + RSINE1 SINE B4 12 141 -24 4 1353 339 25 0 0 chr15 100679052 100679092 -2815882 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1353 202 93 22 44 chr15 100679104 100679124 -2815850 + A-rich Low_complexity Low_complexity 5 22 0 4 1353 1075 57 42 7 chr15 100679124 100679266 -2815708 + B1_Mus2 SINE Alu 1 147 0 4 1353 202 93 22 44 chr15 100679266 100679290 -2815684 + A-rich Low_complexity Low_complexity 23 47 0 4 1353 497 257 38 167 chr15 100679302 100679512 -2815462 + RMER15 LTR ERVL 375 557 -18 4 1353 341 335 102 10 chr15 100680681 100680877 -2814097 - MER63D DNA AcHobo -103 958 745 4 1353 557 311 86 25 chr15 100680885 100681165 -2813809 - MER63D DNA AcHobo -531 530 234 4 1353 392 171 12 0 chr15 100681169 100681251 -2813723 + (CA)n Simple_repeat Simple_repeat 1 83 0 4 1353 292 274 85 8 chr15 100681311 100681429 -2813545 - MER63D DNA AcHobo -926 135 9 4 1353 432 77 0 0 chr15 100681438 100681503 -2813471 + (CA)n Simple_repeat Simple_repeat 1 65 0 4 1353 875 146 22 0 chr15 100681516 100681653 -2813321 - B1_Mur1 SINE Alu -9 140 1 4 1353 1637 107 29 37 chr15 100682044 100682304 -2812670 + Lx3_Mus LINE L1 6727 6986 -23 4 1353 180 0 0 0 chr15 100682304 100682324 -2812650 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 4 1353 1637 107 29 37 chr15 100682324 100682336 -2812638 + Lx3_Mus LINE L1 6987 6996 -13 4 1353 299 227 121 33 chr15 100682347 100682438 -2812536 + PB1D10 SINE Alu 27 125 -2 4 1353 2443 96 8 63 chr15 100682471 100682851 -2812123 - RLTR10D LTR ERVK 0 359 1 4 1353 249 295 94 91 chr15 100683108 100683373 -2811601 + ORR1E LTR MaLR 55 320 -39 4 1353 252 346 9 9 chr15 100683713 100683821 -2811153 + L1MC LINE L1 5769 5876 -2006 4 1353 222 286 191 0 chr15 100683959 100684022 -2810952 + ID4_ SINE ID 3 77 -6 4 1353 495 217 25 0 chr15 100684025 100684186 -2810788 + (CATATA)n Simple_repeat Simple_repeat 6 170 0 4 1353 202 228 0 37 chr15 100684213 100684295 -2810679 + (CATA)n Simple_repeat Simple_repeat 2 80 0 4 1353 546 209 11 17 chr15 100684308 100684488 -2810486 + (CATA)n Simple_repeat Simple_repeat 2 180 0 4 1353 240 273 0 0 chr15 100684503 100684602 -2810372 + (CATA)n Simple_repeat Simple_repeat 4 102 0 4 1353 976 173 299 4 chr15 100684713 100684974 -2810000 - MTD LTR MaLR -58 361 24 4 1353 467 282 112 30 chr15 100685104 100685371 -2809603 - Tigger12c DNA MER2_type -155 579 291 4 1353 193 211 301 27 chr15 100685440 100685586 -2809388 - L2a LINE L2 -263 3163 2978 4 1353 187 29 27 54 chr15 100685703 100685740 -2809234 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 1353 251 297 0 0 chr15 100685971 100686035 -2808939 - Tigger12c DNA MER2_type -433 301 238 4 1353 402 334 183 37 chr15 100686366 100686776 -2808198 - MER119 DNA MER1_type -105 478 9 4 1353 2966 63 47 3 chr15 100686862 100687245 -2807729 + MTB LTR MaLR 1 400 0 4 1353 275 274 0 14 chr15 100687442 100687516 -2807458 + RSINE1 SINE B4 64 136 -29 4 1353 365 265 36 12 chr15 100687647 100687731 -2807243 + B1F SINE Alu 4 89 -60 4 1353 389 286 0 51 chr15 100687892 100688217 -2806757 + G-rich Low_complexity Low_complexity 1 308 0 4 1353 971 223 69 62 chr15 100688272 100688592 -2806382 - ORR1D2 LTR MaLR -7 363 42 4 1353 1089 136 0 0 chr15 100688604 100688781 -2806193 + (CATA)n Simple_repeat Simple_repeat 4 180 0 4 1353 785 297 21 8 chr15 100688830 100689064 -2805910 + B4A SINE B4 26 262 -30 4 1353 262 0 53 0 chr15 100689066 100689104 -2805870 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1353 3117 61 2 39 chr15 100689246 100689455 -2805519 - MTA_Mm LTR MaLR 0 396 194 4 1353 1189 50 0 12 chr15 100689455 100689618 -2805356 + (TTTC)n Simple_repeat Simple_repeat 1 161 0 4 1353 873 0 0 0 chr15 100689620 100689717 -2805257 + (TTCCC)n Simple_repeat Simple_repeat 4 100 0 4 1353 609 52 0 0 chr15 100689719 100689796 -2805178 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 4 1353 1124 67 0 0 chr15 100689796 100689931 -2805043 - B1_Mm SINE Alu -12 135 1 4 1353 3117 61 2 39 chr15 100689931 100690125 -2804849 - MTA_Mm LTR MaLR -203 193 2 4 1353 24 0 0 0 chr15 100691129 100691153 -2803821 + AT_rich Low_complexity Low_complexity 1 24 0 4 1353 480 260 0 0 chr15 100691218 100691391 -2803583 + (TG)n Simple_repeat Simple_repeat 2 174 0 4 1353 564 300 12 6 chr15 100691404 100691565 -2803409 - RSINE1 SINE B4 0 165 4 4 1353 235 273 0 83 chr15 100692176 100692248 -2802726 + Charlie24 DNA MER1_type 2369 2434 -16 4 1353 1200 94 35 0 chr15 100692967 100693137 -2801837 - B2_Mm2 SINE B2 -19 176 1 4 1353 329 252 81 7 chr15 100693592 100693740 -2801234 + L1ME1 LINE L1 2158 2316 -4084 4 1353 1240 303 102 7 chr15 100693914 100694483 -2800491 - L1MA8 LINE L1 -25 6266 5644 4 1353 420 313 26 0 chr15 100694521 100694636 -2800338 - RSINE1 SINE B4 -30 135 18 4 1353 466 261 0 48 chr15 100694715 100694860 -2800114 - L1MA8 LINE L1 -684 5628 5491 4 1353 523 101 0 57 chr15 100694863 100694968 -2800006 + L1Md_F3 LINE L1 6470 6568 -16 4 1353 236 269 87 0 chr15 100695044 100695148 -2799826 - Lx8 LINE L1 0 7473 7361 4 1353 505 216 37 7 chr15 100695161 100695296 -2799678 - L1MA8 LINE L1 -819 5472 5334 4 1353 280 177 0 151 chr15 100695296 100695369 -2799605 + PB1D9 SINE Alu 2 63 -57 4 1353 352 324 194 22 chr15 100695431 100695967 -2799007 + L1ME1 LINE L1 2679 3300 -3019 4 1353 360 0 0 0 chr15 100696027 100696067 -2798907 + (GA)n Simple_repeat Simple_repeat 1 40 0 4 1353 1354 224 16 74 chr15 100696072 100696438 -2798536 - ORR1D1 LTR MaLR -29 345 1 4 1353 458 289 194 53 chr15 100696438 100697124 -2797850 + L1ME1 LINE L1 3578 4360 -1959 4 1353 414 0 0 0 chr15 100698391 100698437 -2796537 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1353 296 299 12 100 chr15 100698630 100698790 -2796184 + L1ME1 LINE L1 4730 4875 -1444 4 1353 535 259 74 19 chr15 100699377 100699630 -2795344 + L1ME1 LINE L1 5439 5718 -633 4 1353 258 193 35 0 chr15 100699821 100699878 -2795096 - ID SINE ID -165 59 1 4 1353 653 265 101 97 chr15 100699913 100700327 -2794647 + L1ME1 LINE L1 5794 6209 -143 4 1353 241 309 52 60 chr15 100700471 100700605 -2794369 - MIRb SINE MIR -35 233 101 4 1353 26 101 0 0 chr15 100700993 100701082 -2793892 + GC_rich Low_complexity Low_complexity 1 89 0 4 1353 350 156 7 43 chr15 100701131 100701272 -2793702 + (CGGG)n Simple_repeat Simple_repeat 3 138 0 4 1353 47 0 0 0 chr15 100701280 100701327 -2793647 + GC_rich Low_complexity Low_complexity 1 47 0 4 1353 21 0 0 0 chr15 100701355 100701376 -2793598 + GC_rich Low_complexity Low_complexity 1 21 0 4 1353 207 88 0 0 chr15 100701466 100701500 -2793474 + (CCG)n Simple_repeat Simple_repeat 1 34 0 4 1353 200 351 119 45 chr15 100704214 100704390 -2790584 - L3 LINE CR1 -11 4478 4290 4 1353 421 264 191 7 chr15 100705475 100705616 -2789358 + MIRb SINE MIR 32 198 -70 4 1353 1233 141 0 0 chr15 100706933 100707201 -2787773 + (TG)n Simple_repeat Simple_repeat 1 268 0 4 1353 908 182 112 0 chr15 100708666 100708853 -2786121 - B3 SINE B2 -7 209 2 4 1353 263 234 117 0 chr15 100709344 100709438 -2785536 - B1F SINE Alu -11 138 34 4 1353 25 31 0 0 chr15 100709940 100709972 -2785002 + AT_rich Low_complexity Low_complexity 1 32 0 4 1353 429 286 93 93 chr15 100710164 100710326 -2784648 - RSINE1 SINE B4 -1 164 3 4 1353 483 289 194 16 chr15 100710399 100710652 -2784322 - Lx9 LINE L1 -226 7418 7121 4 1353 31 44 0 0 chr15 100711154 100711199 -2783775 + AT_rich Low_complexity Low_complexity 1 45 0 4 1353 1742 163 29 0 chr15 100712692 100713005 -2781969 + Lx LINE L1 6323 6644 -10 4 1353 180 111 0 0 chr15 100713007 100713034 -2781940 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 4 1353 470 332 112 80 chr15 100713056 100713520 -2781454 - L1ME1 LINE L1 -73 6106 5628 4 1353 832 156 0 75 chr15 100713520 100713680 -2781294 + B1_Mur4 SINE Alu 2 149 -1 4 1353 781 269 115 8 chr15 100713763 100714007 -2780967 - B4A SINE B4 -10 282 13 4 1353 274 267 98 12 chr15 100714129 100714292 -2780682 - L1MC LINE L1 -902 5442 5266 4 1353 21 36 0 0 chr15 100714479 100714507 -2780467 + AT_rich Low_complexity Low_complexity 1 28 0 4 1353 3340 16 8 3 chr15 100714507 100714887 -2780087 - L1Md_F2 LINE L1 -14 6568 6187 4 1353 331 362 90 5 chr15 100715057 100715257 -2779717 - L1MEf LINE L1 -1230 5314 5098 4 1353 547 306 197 21 chr15 100715275 100715414 -2779560 - L1MEf LINE L1 -1536 5008 4868 4 1353 614 269 47 0 chr15 100715414 100715563 -2779411 - RSINE1 SINE B4 -8 157 2 4 1353 547 306 197 21 chr15 100715563 100716048 -2778926 - L1MEf LINE L1 -1677 4867 4274 4 1353 740 116 104 37 chr15 100716146 100716280 -2778694 + B1_Mur2 SINE Alu 7 149 0 4 1353 579 299 137 19 chr15 100716435 100716640 -2778334 + B4A SINE B4 2 230 -62 4 1353 524 317 92 8 chr15 100716641 100716892 -2778082 + B4A SINE B4 2 273 -19 4 1353 2356 127 32 11 chr15 100717133 100717506 -2777468 - ORR1C2 LTR MaLR 0 384 4 4 1353 293 242 117 31 chr15 100717600 100717762 -2777212 - L1MEf LINE L1 -2719 3825 3650 4 1353 205 197 0 32 chr15 100717825 100717888 -2777086 + CT-rich Low_complexity Low_complexity 3 63 0 4 1353 380 194 0 14 chr15 100717896 100717969 -2777005 - PB1D10 SINE Alu 0 117 46 4 1353 934 289 89 60 chr15 100718032 100718680 -2776294 - L1MEf LINE L1 -3207 3337 2671 4 1353 423 232 171 27 chr15 100718677 100718823 -2776151 - L1MD3 LINE L1 -2 7993 7827 4 1353 268 259 202 9 chr15 100719072 100719181 -2775793 - L1MB1 LINE L1 -99 6090 5961 4 1353 198 0 0 0 chr15 100719239 100719261 -2775713 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 1353 359 171 13 0 chr15 100719302 100719378 -2775596 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 1353 611 194 19 0 chr15 100719422 100719530 -2775444 - B1_Mur3 SINE Alu -2 147 38 4 1353 268 324 49 28 chr15 100719739 100719882 -2775092 - L1MEf LINE L1 -4492 2148 2003 4 1353 857 220 73 36 chr15 100719939 100720198 -2774776 + MTD LTR MaLR 75 405 -14 4 1353 2351 219 133 115 chr15 100720202 100721211 -2773763 + MTD-int LTR MaLR 1 1098 -160 4 1353 423 0 0 0 chr15 100721212 100721259 -2773715 + (TTTA)n Simple_repeat Simple_repeat 1 47 0 4 1353 722 101 37 0 chr15 100721263 100721372 -2773602 - B1_Mus1 SINE Alu 0 148 36 4 1353 459 224 155 7 chr15 100721391 100721539 -2773435 + MTD-int LTR MaLR 1086 1255 -3 4 1353 30 27 0 0 chr15 100721556 100721593 -2773381 + AT_rich Low_complexity Low_complexity 1 37 0 4 1353 484 151 194 0 chr15 100721608 100721701 -2773273 + MTD LTR MaLR 308 418 -1 4 1353 412 238 133 0 chr15 100721834 100721939 -2773035 - PB1D9 SINE Alu -1 119 1 4 1353 364 286 55 61 chr15 100722076 100722240 -2772734 - RSINE1 SINE B4 0 165 3 5 1353 592 299 113 11 chr15 100722272 100722391 -2772583 - Lx8 LINE L1 -1 7472 7305 5 1353 227 242 48 0 chr15 100722391 100722453 -2772521 - RMER15 LTR ERVL -108 467 403 5 1353 592 299 113 11 chr15 100722453 100722546 -2772428 - Lx8 LINE L1 -1 7304 7171 5 1353 240 321 36 9 chr15 100723185 100723295 -2771679 - L1MEf LINE L1 -6223 324 212 4 1353 405 219 50 50 chr15 100723573 100723693 -2771281 - B1_Mur3 SINE Alu -7 142 23 5 1353 1259 35 7 0 chr15 100724075 100724220 -2770754 - B1_Mus2 SINE Alu 0 147 2 5 1353 2501 78 24 9 chr15 100725017 100725132 -2769842 - L1_Mus2 LINE L1 0 6566 6546 5 1353 1155 54 0 52 chr15 100725132 100725287 -2769687 - B1_Mm SINE Alu 0 147 1 5 1353 2501 78 24 9 chr15 100725287 100725615 -2769359 - L1_Mus2 LINE L1 -21 6545 6212 5 1353 27 0 0 0 chr15 100725843 100725870 -2769104 + AT_rich Low_complexity Low_complexity 1 27 0 5 1353 1551 240 63 25 chr15 100726521 100726965 -2768009 - Lx6 LINE L1 -5 7455 6995 5 1353 360 119 0 0 chr15 100727125 100727184 -2767790 + (CACG)n Simple_repeat Simple_repeat 2 60 0 5 1353 790 171 22 18 chr15 100727548 100727700 -2767274 + B3A SINE B2 1 142 -53 5 1353 487 75 12 24 chr15 100727701 100727783 -2767191 + (TCCCC)n Simple_repeat Simple_repeat 2 82 0 5 1353 257 283 0 0 chr15 100728375 100728435 -2766539 - BC1_Mm scRNA scRNA -71 81 22 5 1353 246 215 0 0 chr15 100728486 100728551 -2766423 - L1MC3 LINE L1 -1 7994 7930 5 1353 450 150 181 48 chr15 100728562 100728667 -2766307 - PB1D9 SINE Alu -1 119 1 5 1353 328 278 144 31 chr15 100728672 100728832 -2766142 - L1MC3 LINE L1 -133 7862 7685 5 1353 275 157 20 0 chr15 100728873 100728924 -2766050 - L1MC3 LINE L1 -400 7595 7544 5 1353 304 289 146 13 chr15 100729744 100729895 -2765079 - L1MC3 LINE L1 -506 7489 7319 5 1353 281 302 133 5 chr15 100729981 100730177 -2764797 - L1MC3 LINE L1 -982 7013 6793 5 1353 241 257 122 0 chr15 100730272 100730346 -2764628 - MER46C DNA MER2_type -11 327 245 5 1353 1433 158 113 0 chr15 100730358 100730624 -2764350 - ORR1D1 LTR MaLR 0 374 79 5 1353 2333 83 10 0 chr15 100730625 100730939 -2764035 + ORR1A3 LTR MaLR 2 318 -8 5 1353 438 144 0 98 chr15 100730943 100731035 -2763939 - ORR1D1 LTR MaLR -291 83 1 5 1353 315 298 112 41 chr15 100731255 100731549 -2763425 - L1MC3 LINE L1 -1210 6672 6358 5 1353 211 269 0 0 chr15 100731677 100731729 -2763245 - B1F SINE Alu -1 148 97 5 1353 201 74 0 0 chr15 100731783 100731810 -2763164 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1353 2622 305 59 18 chr15 100731915 100732943 -2762031 - Lx8 LINE L1 -69 7404 6334 5 1353 261 0 0 0 chr15 100732943 100732972 -2762002 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1353 381 252 16 16 chr15 100733042 100733167 -2761807 - L1MC3 LINE L1 -1571 6214 6090 5 1353 950 254 95 84 chr15 100733359 100733411 -2761563 + MTE2a LTR MaLR 4 60 -319 5 1353 360 0 0 0 chr15 100733411 100733451 -2761523 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 5 1353 1133 83 0 0 chr15 100733453 100733597 -2761377 - B1_Mus1 SINE Alu -2 146 3 5 1353 950 254 95 84 chr15 100733597 100733911 -2761063 + MTE2a LTR MaLR 61 375 -4 5 1353 316 206 0 0 chr15 100734311 100734374 -2760600 - MER74A LTR ERVL -249 309 247 5 1353 182 321 131 0 chr15 100734528 100734612 -2760362 - L2c LINE L2 -8 3379 3285 5 1353 233 319 0 53 chr15 100734627 100734703 -2760271 - L2b LINE L2 0 3375 3304 5 1353 267 282 0 0 chr15 100734787 100734897 -2760077 + C-rich Low_complexity Low_complexity 1 110 0 5 1353 307 287 185 8 chr15 100734905 100735035 -2759939 - HAL1-3A_ME LINE L1 -422 2436 2284 5 1353 481 258 20 17 chr15 100735051 100735404 -2759570 + CT-rich Low_complexity Low_complexity 1 354 0 5 1353 225 0 0 0 chr15 100735516 100735541 -2759433 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1353 188 254 49 33 chr15 100737645 100737706 -2757268 + L3 LINE CR1 4319 4380 -109 5 1353 419 315 68 32 chr15 100737986 100738176 -2756798 - MER20 DNA MER1_type -1 218 22 5 1353 736 229 88 13 chr15 100738705 100738864 -2756110 + B4 SINE B4 2 172 -120 5 1353 626 189 9 0 chr15 100738911 100739017 -2755957 - B1_Mus1 SINE Alu -13 135 29 5 1353 633 239 52 0 chr15 100739010 100739144 -2755830 + B4 SINE B4 148 288 -4 5 1353 250 252 57 0 chr15 100739574 100739670 -2755304 - L1MB2 LINE L1 -179 6004 5905 5 1353 333 47 0 0 chr15 100740698 100740741 -2754233 + (TCTG)n Simple_repeat Simple_repeat 4 46 0 5 1353 759 236 7 26 chr15 100741451 100741603 -2753371 + RSINE1 SINE B4 17 165 0 5 1353 417 305 91 0 chr15 100742171 100742325 -2752649 + MIRc SINE MIR 62 229 -39 5 1353 218 136 0 22 chr15 100742481 100742526 -2752448 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1353 545 157 40 17 chr15 100742544 100742719 -2752255 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 1353 644 289 58 25 chr15 100742738 100742981 -2751993 - B4 SINE B4 0 292 50 5 1353 1175 223 160 14 chr15 100743103 100743453 -2751521 - MER31A LTR ERV1 -82 403 3 5 1353 353 221 22 44 chr15 100743524 100743614 -2751360 + PB1D10 SINE Alu 9 96 -21 5 1353 203 0 0 36 chr15 100743614 100743642 -2751332 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 5 1353 236 284 50 86 chr15 100743642 100743690 -2751284 + B1_Mur3 SINE Alu 95 142 -7 5 1353 1173 55 0 33 chr15 100744438 100744589 -2750385 + B1_Mus2 SINE Alu 1 146 -1 5 1353 25 31 0 0 chr15 100744861 100744893 -2750081 + AT_rich Low_complexity Low_complexity 1 32 0 5 1353 42 50 0 12 chr15 100744900 100744950 -2750024 + AT_rich Low_complexity Low_complexity 1 50 0 5 1353 399 77 90 0 chr15 100744950 100745028 -2749946 + Lx LINE L1 6569 6653 -1 5 1353 42 50 0 12 chr15 100745028 100745058 -2749916 + AT_rich Low_complexity Low_complexity 1 30 0 5 1353 919 146 61 0 chr15 100745324 100745489 -2749485 - URR1A DNA MER1_type -8 218 44 5 1353 187 203 14 14 chr15 100746082 100746152 -2748822 + CT-rich Low_complexity Low_complexity 4 73 0 5 1353 285 300 0 0 chr15 100746158 100746228 -2748746 - ID4_ SINE ID -13 70 1 5 1353 276 200 0 0 chr15 100746233 100746298 -2748676 + (TG)n Simple_repeat Simple_repeat 1 65 0 5 1353 290 286 80 75 chr15 100746330 100746530 -2748444 + RLTR21 LTR ERVK 1056 1256 -316 5 1353 636 247 50 12 chr15 100746514 100746674 -2748300 - B4A SINE B4 0 292 127 5 1353 1004 178 101 29 chr15 100747047 100747255 -2747719 - URR1B DNA MER1_type 0 225 3 5 1353 312 266 16 85 chr15 100747420 100747609 -2747365 + G-rich Low_complexity Low_complexity 1 176 0 5 1353 361 178 0 179 chr15 100747661 100747873 -2747101 + G-rich Low_complexity Low_complexity 3 176 0 5 1353 234 347 6 11 chr15 100747834 100748012 -2746962 + GA-rich Low_complexity Low_complexity 3 179 0 5 1353 315 302 11 55 chr15 100747938 100748120 -2746854 + G-rich Low_complexity Low_complexity 3 176 0 5 1353 302 278 27 75 chr15 100748204 100748391 -2746583 + G-rich Low_complexity Low_complexity 3 180 0 5 1353 330 253 0 114 chr15 100748413 100748614 -2746360 + G-rich Low_complexity Low_complexity 3 180 0 5 1353 418 291 42 52 chr15 100749075 100749267 -2745707 + MIRc SINE MIR 66 255 -13 5 1353 213 39 0 0 chr15 100749394 100749420 -2745554 + (TGG)n Simple_repeat Simple_repeat 1 26 0 5 1353 477 280 62 39 chr15 100749441 100749571 -2745403 - RSINE1 SINE B4 -30 135 3 5 1353 188 290 16 16 chr15 100750270 100750333 -2744641 + MIR SINE MIR 123 185 -77 5 1353 210 291 28 33 chr15 100750904 100751085 -2743889 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 5 1353 277 262 25 0 chr15 100751691 100751771 -2743203 + MIR SINE MIR 107 188 -74 5 1353 704 167 57 14 chr15 100751819 100751959 -2743015 + B1_Mur2 SINE Alu 2 147 -2 5 1353 474 196 98 70 chr15 100751955 100752098 -2742876 + B4A SINE B4 69 215 -77 5 1353 629 263 25 25 chr15 100753003 100753163 -2741811 - RSINE1 SINE B4 -4 161 2 5 1353 716 272 121 0 chr15 100753163 100753365 -2741609 - B4A SINE B4 -65 227 1 5 1353 2768 168 54 86 chr15 100754602 100755119 -2739855 + Lx9 LINE L1 6936 7465 -179 5 1353 261 0 0 0 chr15 100755119 100755148 -2739826 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 1353 2768 168 54 86 chr15 100755148 100755352 -2739622 + Lx9 LINE L1 7466 7634 -10 5 1353 448 210 216 7 chr15 100755357 100755496 -2739478 + RCHARR1 DNA MER1_type 67 234 -740 5 1353 402 307 102 0 chr15 100755755 100755931 -2739043 + RCHARR1 DNA MER1_type 272 465 -509 5 1353 502 256 168 33 chr15 100755915 100756129 -2738845 + RCHARR1 DNA MER1_type 732 974 0 5 1353 284 364 68 26 chr15 100756344 100756578 -2738396 + L2c LINE L2 3082 3325 -62 5 1353 429 270 144 36 chr15 100756668 100756918 -2738056 - L1MB3 LINE L1 -250 5933 5657 5 1353 285 329 70 38 chr15 100757118 100757276 -2737698 - RSINE1 SINE B4 0 165 3 5 1353 3317 31 0 0 chr15 100757427 100757810 -2737164 - L1Md_A LINE L1 0 6582 6200 5 1353 620 339 28 48 chr15 100757938 100758186 -2736788 - B4A SINE B4 0 292 50 5 1353 2516 80 6 0 chr15 100758194 100758519 -2736455 + ORR1A2 LTR MaLR 1 327 0 5 1353 522 303 82 22 chr15 100758519 100758652 -2736322 - L1M4 LINE L1 -1068 5078 4941 5 1353 396 0 0 0 chr15 100758652 100758696 -2736278 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1353 522 303 82 22 chr15 100758696 100758930 -2736044 - L1M4 LINE L1 -1206 4940 4689 5 1353 340 289 0 26 chr15 100759033 100759111 -2735863 - B1F SINE Alu -1 148 73 5 1353 372 191 71 18 chr15 100759130 100759242 -2735732 - Lx8 LINE L1 0 7473 7356 5 1353 446 251 0 50 chr15 100759363 100759650 -2735324 + (CCTG)n Simple_repeat Simple_repeat 1 272 0 5 1353 1166 75 0 0 chr15 100760379 100760525 -2734449 - B1_Mus1 SINE Alu -2 146 1 5 1353 438 237 15 15 chr15 100760757 100760890 -2734084 - Tigger2b DNA MER2_type -464 262 130 5 1353 216 0 0 0 chr15 100760890 100760914 -2734060 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1353 262 279 0 0 chr15 100760949 100761010 -2733964 - Tigger2b DNA MER2_type -665 61 1 5 1353 337 283 84 13 chr15 100761385 100761539 -2733435 + L1M5 LINE L1 4912 5076 -1070 5 1353 282 127 53 35 chr15 100761669 100761726 -2733248 + B1_Mus2 SINE Alu 2 59 -88 5 1353 321 161 0 0 chr15 100761735 100761822 -2733152 + GA-rich Low_complexity Low_complexity 94 180 0 5 1353 600 62 125 0 chr15 100761826 100761922 -2733052 + B1_Mur4 SINE Alu 43 150 0 5 1353 303 282 88 103 chr15 100761929 100762123 -2732851 + L1M5 LINE L1 5191 5381 -765 5 1353 385 344 25 18 chr15 100762185 100762348 -2732626 + B4 SINE B4 46 209 -83 5 1353 240 286 0 31 chr15 100762578 100762643 -2732331 + tRNA-Gly-GGG tRNA tRNA 2 64 -10 5 1353 553 165 124 19 chr15 100762585 100762690 -2732284 + B3 SINE B2 15 130 -86 5 1353 477 229 38 0 chr15 100762773 100762878 -2732096 + PB1D7 SINE Alu 1 109 -11 5 1353 1960 175 33 18 chr15 100763137 100763532 -2731442 - RMER17C LTR ERVK -9 401 1 5 1353 310 286 40 20 chr15 100764351 100764451 -2730523 + MIRc SINE MIR 57 158 -110 5 1353 21 36 0 0 chr15 100764835 100764863 -2730111 + AT_rich Low_complexity Low_complexity 1 28 0 5 1353 526 268 57 8 chr15 100764955 100765079 -2729895 - RSINE1 SINE B4 -25 140 11 6 1353 211 311 102 19 chr15 100765097 100765205 -2729769 + MIR3 SINE MIR 85 201 -7 6 1353 231 36 0 0 chr15 100765529 100765557 -2729417 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1353 360 0 0 0 chr15 100765741 100765781 -2729193 + (CCCTAA)n Simple_repeat Simple_repeat 1 40 0 6 1353 279 197 32 32 chr15 100767304 100767367 -2727607 + ID4 SINE ID 1 63 -20 6 1353 284 111 19 0 chr15 100768287 100768341 -2726633 + (CATA)n Simple_repeat Simple_repeat 4 58 0 6 1353 283 202 54 0 chr15 100768420 100768588 -2726386 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 6 1353 495 285 97 46 chr15 100768598 100768793 -2726181 - ID_B1 SINE B4 -10 214 10 6 1353 195 42 0 0 chr15 100768896 100768920 -2726054 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 6 1353 238 333 0 74 chr15 100770149 100770230 -2724744 + RSINE1 SINE B4 91 165 0 6 1353 567 210 11 6 chr15 100770263 100770440 -2724534 + (CA)n Simple_repeat Simple_repeat 1 178 0 6 1353 261 336 98 60 chr15 100770815 100770844 -2724130 + MIR3 SINE MIR 1 28 -180 6 1353 1452 141 256 20 chr15 100770844 100771141 -2723833 - ORR1B2 LTR MaLR 0 367 1 6 1353 261 336 98 60 chr15 100771141 100771244 -2723730 + MIR3 SINE MIR 29 138 -70 6 1353 2284 183 81 19 chr15 100771543 100771597 -2723377 - RLTR20A1 LTR ERVK -41 510 448 6 1353 378 0 0 0 chr15 100771597 100771639 -2723335 + (TC)n Simple_repeat Simple_repeat 1 42 0 6 1353 2284 183 81 19 chr15 100771639 100772064 -2722910 - RLTR20A1 LTR ERVK -104 447 2 6 1353 306 0 0 0 chr15 100772242 100772276 -2722698 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1353 202 189 0 0 chr15 100772967 100773004 -2721970 + G-rich Low_complexity Low_complexity 1 37 0 6 1353 1106 200 9 28 chr15 100775365 100775581 -2719393 - B3 SINE B2 -4 212 1 6 1353 255 31 0 0 chr15 100775625 100775657 -2719317 + (CCAA)n Simple_repeat Simple_repeat 2 33 0 6 1353 231 88 0 0 chr15 100776342 100776376 -2718598 + (CCCTG)n Simple_repeat Simple_repeat 1 34 0 6 1353 593 157 132 0 chr15 100776759 100776880 -2718094 - B1_Mur1 SINE Alu 0 149 13 6 1353 378 231 111 37 chr15 100776880 100776894 -2718080 - ID_B1 SINE B4 -2 222 78 6 1353 228 161 86 35 chr15 100777058 100777116 -2717858 + MIRb SINE MIR 192 252 -16 6 1353 351 213 376 13 chr15 100777188 100777345 -2717629 - B3 SINE B2 -2 214 1 6 1353 2240 114 6 0 chr15 100777698 100778015 -2716959 - ORR1A2 LTR MaLR -8 319 1 6 1353 405 241 11 44 chr15 100778095 100778186 -2716788 - PB1D10 SINE Alu -1 116 29 6 1353 1072 254 89 39 chr15 100778308 100778669 -2716305 - MTEb LTR MaLR 0 379 1 6 1353 928 332 86 79 chr15 100778676 100779311 -2715663 - MTEb-int LTR MaLR -24 1556 912 6 1353 849 159 0 21 chr15 100779311 100779452 -2715522 - B1_Mus1 SINE Alu -9 139 2 6 1353 928 332 86 79 chr15 100779452 100779664 -2715310 - MTEb-int LTR MaLR -669 911 703 6 1353 590 287 31 0 chr15 100779692 100779821 -2715153 - MTEb LTR MaLR -246 133 1 6 1353 764 137 46 0 chr15 100780911 100781042 -2713932 + B1_Mur1 SINE Alu 12 148 -1 6 1353 387 0 0 0 chr15 100781053 100781096 -2713878 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1353 339 264 36 194 chr15 100781137 100781466 -2713508 - ORR1E LTR MaLR -6 353 77 6 1353 234 364 30 30 chr15 100781772 100781905 -2713069 - MIR3 SINE MIR -9 199 67 6 1353 231 365 41 20 chr15 100781949 100782047 -2712927 + MER5A DNA MER1_type 68 167 -22 6 1353 388 316 118 7 chr15 100782064 100782333 -2712641 + MER58B DNA MER1_type 1 334 -7 6 1353 288 0 0 0 chr15 100782821 100782853 -2712121 + (T)n Simple_repeat Simple_repeat 1 32 0 6 1353 212 136 21 64 chr15 100782900 100782947 -2712027 - L2b LINE L2 -1 3374 3330 6 1353 21 0 0 0 chr15 100783023 100783044 -2711930 + AT_rich Low_complexity Low_complexity 1 21 0 6 1353 198 0 0 0 chr15 100783151 100783173 -2711801 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 6 1353 477 87 0 0 chr15 100783985 100784036 -2710938 + (GA)n Simple_repeat Simple_repeat 1 51 0 6 1353 648 0 0 0 chr15 100784036 100784108 -2710866 + (GAA)n Simple_repeat Simple_repeat 3 74 0 6 1353 477 87 0 0 chr15 100784108 100784125 -2710849 + (GA)n Simple_repeat Simple_repeat 2 18 0 6 1353 417 97 0 0 chr15 100784129 100784201 -2710773 + (CAGG)n Simple_repeat Simple_repeat 2 73 0 6 1353 882 260 124 24 chr15 100784241 100784651 -2710323 - L1M4 LINE L1 -2191 3955 3505 6 1353 509 0 16 0 chr15 100786922 100786983 -2707991 + (TTA)n Simple_repeat Simple_repeat 2 63 0 6 1353 466 16 32 0 chr15 100788051 100788114 -2706860 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 1353 643 224 36 14 chr15 100788210 100788367 -2706607 - ID_B1 SINE B4 -46 246 82 6 1353 279 0 0 0 chr15 100789363 100789394 -2705580 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 6 1353 254 237 11 21 chr15 100789917 100790012 -2704962 + T-rich Low_complexity Low_complexity 6 99 0 6 1353 220 191 24 0 chr15 100791808 100791850 -2703124 + L2b LINE L2 3320 3362 -13 6 1353 216 0 0 0 chr15 100792228 100792252 -2702722 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1353 1011 285 64 31 chr15 100792428 100792786 -2702188 - MTEb LTR MaLR -2 377 8 6 1353 1206 35 0 7 chr15 100793274 100793417 -2701557 - B1_Mus1 SINE Alu -2 146 5 6 1353 233 209 171 69 chr15 100793875 100793897 -2701077 + YREP_Mm Unknown Unknown 130 203 -1609 6 1353 852 75 8 8 chr15 100793897 100794018 -2700956 - B1_Mus2 SINE Alu -1 146 26 6 1353 233 209 171 69 chr15 100794018 100794050 -2700924 + YREP_Mm Unknown Unknown 204 322 -1490 6 169 1526 42 5 45 chr15 100794314 100794513 -2700461 - B2_Mm2 SINE B2 -3 192 2 6 1354 220 405 57 8 chr15 100797869 100797991 -2696983 - MIRb SINE MIR -25 243 116 6 1354 232 252 77 36 chr15 100797987 100798096 -2696878 - MIR SINE MIR -14 254 142 6 1354 296 313 0 46 chr15 100798613 100798700 -2696274 + ID4_ SINE ID 1 83 0 6 1354 1007 171 35 53 chr15 100800108 100800336 -2694638 + URR1A DNA MER1_type 1 224 -2 6 1354 233 384 18 18 chr15 100801164 100801278 -2693696 + MIRc SINE MIR 129 242 -26 6 1354 1347 73 45 0 chr15 100801364 100801543 -2693431 + B2_Mm2 SINE B2 1 187 -8 6 1354 358 104 0 0 chr15 100801718 100801766 -2693208 - HAL1-3A_ME LINE L1 -835 2023 1976 6 1354 198 71 0 0 chr15 100801789 100801817 -2693157 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1354 230 294 75 0 chr15 100801841 100801921 -2693053 - ID2 SINE ID -59 93 8 6 1354 227 39 36 55 chr15 100802808 100802863 -2692111 + (TGGGGG)n Simple_repeat Simple_repeat 2 55 0 6 1354 506 231 19 9 chr15 100802863 100802968 -2692006 + B1F2 SINE Alu 41 146 -3 6 1354 1077 188 96 15 chr15 100803730 100804000 -2690974 + B4 SINE B4 1 292 0 6 1354 523 215 11 0 chr15 100804003 100804180 -2690794 + (CA)n Simple_repeat Simple_repeat 2 180 0 6 1354 472 290 92 52 chr15 100804218 100804371 -2690603 + RSINE1 SINE B4 7 165 0 6 1354 324 0 0 0 chr15 100804494 100804530 -2690444 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1354 435 245 51 0 chr15 100805475 100805573 -2689401 + PB1D10 SINE Alu 13 115 -2 6 1354 828 162 37 0 chr15 100805581 100805717 -2689257 + B1_Mus1 SINE Alu 3 143 -5 6 1354 948 189 26 26 chr15 100805716 100805906 -2689068 + B3 SINE B2 27 216 0 6 1354 1426 75 11 5 chr15 100806249 100806438 -2688536 + B2_Mm2 SINE B2 1 190 -5 6 1354 255 303 38 8 chr15 100806793 100806926 -2688048 + (TCTA)n Simple_repeat Simple_repeat 4 140 0 6 1354 387 60 0 0 chr15 100807540 100807590 -2687384 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 6 1354 904 136 0 73 chr15 100807590 100807741 -2687233 - B1_Mur3 SINE Alu -9 140 1 6 1354 276 224 0 17 chr15 100807867 100807924 -2687050 - Charlie1 DNA MER1_type -1 2780 2725 6 1354 407 247 0 0 chr15 100807924 100808005 -2686969 + RSINE1 SINE B4 2 82 -83 6 1354 222 37 0 0 chr15 100808042 100808069 -2686905 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 1354 378 259 96 0 chr15 100808178 100808313 -2686661 - Charlie1 DNA MER1_type -536 2245 2098 6 1354 362 305 60 45 chr15 100808370 100808504 -2686470 - Charlie1 DNA MER1_type -2644 137 2 6 1354 788 79 70 0 chr15 100808577 100808807 -2686167 + (TCTA)n Simple_repeat Simple_repeat 1 246 0 6 1354 28 0 0 0 chr15 100809241 100809269 -2685705 + AT_rich Low_complexity Low_complexity 1 28 0 6 1354 385 242 10 87 chr15 100810200 100810304 -2684670 - PB1D7 SINE Alu 0 120 25 6 1354 272 260 13 27 chr15 100810238 100810313 -2684661 - ID_B1 SINE B4 -55 169 96 6 1354 1324 40 89 17 chr15 100810321 100810500 -2684474 - B2_Mm2 SINE B2 -1 194 3 6 1354 540 269 62 0 chr15 100810549 100810694 -2684280 - MER5C1 DNA MER1_type -10 253 100 6 1354 216 299 63 25 chr15 100811179 100811258 -2683716 - ID4 SINE ID 0 83 2 6 1354 426 302 46 28 chr15 100812009 100812227 -2682747 + Charlie2a DNA MER1_type 1441 1662 -1199 6 1354 567 297 106 70 chr15 100812885 100813313 -2681661 + Charlie2a DNA MER1_type 1847 2292 -569 6 1354 441 0 0 0 chr15 100813313 100813362 -2681612 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 6 1354 477 315 96 93 chr15 100813362 100813686 -2681288 + Charlie2a DNA MER1_type 2293 2600 -261 6 1354 270 81 0 0 chr15 100814066 100814103 -2680871 + (TC)n Simple_repeat Simple_repeat 1 37 0 6 1354 387 0 0 0 chr15 100815710 100815753 -2679221 + (TC)n Simple_repeat Simple_repeat 1 43 0 6 1354 219 279 44 0 chr15 100815861 100815929 -2679045 - ID SINE ID -149 75 5 6 1354 225 94 0 0 chr15 100816418 100816450 -2678524 + (GGTTG)n Simple_repeat Simple_repeat 1 32 0 6 1354 321 26 0 0 chr15 100816944 100816982 -2677992 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1354 180 111 0 0 chr15 100817576 100817603 -2677371 + (GAAA)n Simple_repeat Simple_repeat 3 29 0 6 1354 1159 14 7 0 chr15 100817828 100817966 -2677008 - B1_Mus2 SINE Alu 0 147 9 6 1354 697 55 214 18 chr15 100817997 100818099 -2676875 + B1_Mus2 SINE Alu 13 138 -9 6 1354 221 30 61 0 chr15 100818099 100818132 -2676842 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1354 540 0 0 0 chr15 100818142 100818202 -2676772 + (GAAAA)n Simple_repeat Simple_repeat 3 62 0 6 1354 222 332 24 115 chr15 100818265 100818473 -2676501 - MIRb SINE MIR -62 206 18 7 1354 1082 76 0 27 chr15 100818875 100819024 -2675950 + B1_Mus1 SINE Alu 4 148 0 7 1354 309 51 0 0 chr15 100819262 100819301 -2675673 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1354 346 68 0 0 chr15 100819366 100819410 -2675564 - HAL1-3A_ME LINE L1 -846 2012 1969 7 1354 267 79 0 0 chr15 100819483 100819521 -2675453 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1354 503 123 0 92 chr15 100819569 100819765 -2675209 + (TG)n Simple_repeat Simple_repeat 2 179 0 7 1354 299 193 0 95 chr15 100819776 100819839 -2675135 - ID4_ SINE ID -26 57 1 7 1354 472 223 58 0 chr15 100819844 100819947 -2675027 - PB1D10 SINE Alu -5 112 4 7 1354 648 284 172 7 chr15 100820141 100820578 -2674396 + L1MB8 LINE L1 5511 6019 -159 7 1354 302 359 127 45 chr15 100821122 100821312 -2673662 + MER89 LTR ERV1 244 449 -110 7 1354 2003 109 44 6 chr15 100821312 100821627 -2673347 + ORR1A2 LTR MaLR 1 327 0 7 1354 302 359 127 45 chr15 100821627 100821704 -2673270 + MER89 LTR ERV1 450 533 -26 7 1354 250 226 294 0 chr15 100822067 100822169 -2672805 - L1M5 LINE L1 -349 5830 5699 7 1354 978 197 122 55 chr15 100822174 100822412 -2672562 - Lx7 LINE L1 0 7696 7434 7 1354 381 102 0 0 chr15 100822412 100822471 -2672503 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1354 978 197 122 55 chr15 100822471 100822544 -2672430 - Lx7 LINE L1 -263 7433 7365 7 1354 253 270 13 13 chr15 100822561 100822636 -2672338 + CT-rich Low_complexity Low_complexity 4 78 0 7 1354 650 100 0 10 chr15 100822653 100822754 -2672220 + (TC)n Simple_repeat Simple_repeat 2 101 0 7 1354 4134 188 76 1 chr15 100822813 100823628 -2671346 - Lx7 LINE L1 -329 7367 6492 7 1354 1005 223 64 8 chr15 100823628 100823863 -2671111 - Lx7 LINE L1 -1337 6359 6112 7 1354 1840 205 14 0 chr15 100823855 100824206 -2670768 - Lx7 LINE L1 -55 5825 5470 7 1354 231 159 91 0 chr15 100824236 100824280 -2670694 - L1_Mur3 LINE L1 -363 5517 5470 7 1354 240 100 100 0 chr15 100824314 100824354 -2670620 - L1_Mur3 LINE L1 -367 5513 5470 7 1354 240 229 0 54 chr15 100824389 100824463 -2670511 - L1_Mur3 LINE L1 -341 5539 5470 7 1354 2226 178 89 20 chr15 100824533 100825072 -2669902 - L1_Mur3 LINE L1 -341 5539 4964 7 1354 11970 153 40 26 chr15 100825064 100827408 -2667566 - L1_Mur3 LINE L1 -1746 4134 1759 7 1354 2193 219 91 21 chr15 100827408 100828078 -2666896 - L1_Mur3 LINE L1 -4502 1378 653 7 1354 243 0 0 0 chr15 100828241 100828268 -2666706 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 1354 342 0 0 0 chr15 100828268 100828305 -2666669 + (GA)n Simple_repeat Simple_repeat 1 38 0 7 1354 640 200 15 67 chr15 100828307 100828441 -2666533 - B1_Mur2 SINE Alu -22 127 1 7 1354 259 297 56 138 chr15 100828441 100828490 -2666484 - MT2B LTR ERVL -455 146 111 7 1354 264 207 56 33 chr15 100828490 100828580 -2666394 - L1M5 LINE L1 -563 5616 5525 7 1354 258 206 14 100 chr15 100828628 100828698 -2666276 - tRNA-Ala-GCY_ tRNA tRNA -8 67 4 7 1354 378 211 143 31 chr15 100828714 100828812 -2666162 - B1_Mur1 SINE Alu -8 141 33 7 1354 26 30 0 0 chr15 100828839 100828872 -2666102 + AT_rich Low_complexity Low_complexity 1 33 0 7 1354 616 227 111 22 chr15 100829113 100829293 -2665681 - B3A SINE B2 0 198 3 7 1354 1295 74 114 0 chr15 100829377 100829552 -2665422 - B2_Mm2 SINE B2 0 195 1 7 1354 316 328 165 25 chr15 100830029 100830598 -2664376 - L1M5 LINE L1 -1446 4700 4052 7 1354 253 315 0 22 chr15 100831117 100831208 -2663766 - Tigger14a DNA MER2_type -218 106 18 7 1354 356 320 6 64 chr15 100831772 100831929 -2663045 - Lx8 LINE L1 -802 6671 6524 7 1354 422 196 9 29 chr15 100831928 100832033 -2662941 + Lx8 LINE L1 7125 7227 -246 7 1354 23 0 0 0 chr15 100832146 100832169 -2662805 + AT_rich Low_complexity Low_complexity 1 23 0 7 1354 1047 124 41 12 chr15 100832180 100832351 -2662623 + B2_Mm2 SINE B2 1 176 -19 7 1354 575 48 12 0 chr15 100833499 100833582 -2661392 + (TG)n Simple_repeat Simple_repeat 2 85 0 7 1354 691 183 0 11 chr15 100834315 100834497 -2660477 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 1354 254 323 71 0 chr15 100834538 100834637 -2660337 - RMER12 LTR ERVK -471 851 746 7 1354 270 295 168 9 chr15 100836598 100836711 -2658263 - B1F SINE Alu -1 148 18 7 1354 180 0 0 0 chr15 100836816 100836836 -2658138 + (GA)n Simple_repeat Simple_repeat 2 21 0 7 1354 242 224 26 89 chr15 100836841 100837032 -2657942 - RMER17C LTR ERVK -161 249 71 7 1354 241 295 28 35 chr15 100837405 100837549 -2657425 + GA-rich Low_complexity Low_complexity 4 146 0 7 1354 229 259 0 0 chr15 100837761 100837815 -2657159 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1354 554 203 187 13 chr15 100837838 100837988 -2656986 - B4A SINE B4 -116 176 1 7 1354 1453 116 40 27 chr15 100838221 100838443 -2656531 - URR1B DNA MER1_type 0 225 1 7 1354 538 271 25 0 chr15 100840242 100840364 -2654610 + B1_Mus1 SINE Alu 2 126 -22 7 1354 571 291 50 0 chr15 100840918 100841100 -2653874 - L1MA6 LINE L1 -22 6278 6088 7 1354 945 176 134 0 chr15 100842561 100842748 -2652226 - B3 SINE B2 -2 214 3 7 1354 412 239 0 0 chr15 100844817 100844905 -2650069 + PB1D10 SINE Alu 11 98 -19 7 1354 414 57 0 0 chr15 100845247 100845300 -2649674 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 1354 1248 48 0 0 chr15 100845739 100845886 -2649088 + B1_Mus2 SINE Alu 1 147 0 7 1354 240 35 0 0 chr15 100845886 100845915 -2649059 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1354 180 0 0 0 chr15 100847133 100847153 -2647821 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 7 1354 560 274 21 19 chr15 100848148 100848335 -2646639 + B3A SINE B2 27 215 -1 7 1354 21 0 0 0 chr15 100848336 100848357 -2646617 + AT_rich Low_complexity Low_complexity 1 21 0 7 1354 289 272 264 13 chr15 100848357 100848588 -2646386 + L1MB8 LINE L1 5880 6168 -10 7 1354 261 83 0 0 chr15 100849549 100849585 -2645389 + (CAG)n Simple_repeat Simple_repeat 2 37 0 7 1354 1093 261 96 26 chr15 100849899 100850292 -2644682 - MT2B LTR ERVL 0 601 56 7 1354 301 174 119 97 chr15 100850277 100850411 -2644563 - MT2B LTR ERVL -456 145 9 7 1354 216 364 75 0 chr15 100852422 100852595 -2642379 + B2_Mm2 SINE B2 8 193 -2 7 1354 551 204 56 0 chr15 100852979 100853087 -2641887 + B1_Mm SINE Alu 2 115 -32 7 1354 337 200 17 0 chr15 100853112 100853172 -2641802 + ID2 SINE ID 5 65 -18 7 1354 261 163 0 0 chr15 100854636 100854685 -2640289 + T-rich Low_complexity Low_complexity 1 49 0 7 1354 296 328 30 0 chr15 100858559 100858690 -2636284 + (CA)n Simple_repeat Simple_repeat 1 135 0 7 1354 823 171 236 6 chr15 100860511 100860693 -2634281 + URR1B DNA MER1_type 1 224 -1 7 1354 312 293 96 22 chr15 100860917 100861053 -2633921 + MIRb SINE MIR 93 238 -30 7 1354 323 227 0 31 chr15 100861303 100861387 -2633587 + ID4 SINE ID 24 99 -53 7 1354 1125 85 0 0 chr15 100862837 100863097 -2631877 + (TC)n Simple_repeat Simple_repeat 1 260 0 7 1354 342 209 163 25 chr15 100863510 100863630 -2631344 + B1_Mur1 SINE Alu 5 136 -13 7 1354 247 204 6 19 chr15 100864323 100864395 -2630579 + B1F SINE Alu 46 117 0 7 1354 282 281 78 17 chr15 100864436 100864552 -2630422 - MTEa LTR MaLR -112 267 145 7 1354 386 261 55 138 chr15 100864708 100864781 -2630193 + B4A SINE B4 25 79 -213 7 1354 857 155 7 33 chr15 100864781 100864934 -2630040 + B1_Mur4 SINE Alu 2 150 0 7 1354 416 331 27 27 chr15 100864953 100865099 -2629875 + B3A SINE B2 24 169 -29 7 1354 936 131 0 14 chr15 100865132 100865272 -2629702 - B1_Mus1 SINE Alu -9 139 2 7 1354 570 169 17 8 chr15 100865340 100865459 -2629515 + B1F SINE Alu 21 140 -9 7 1354 909 217 40 58 chr15 100866539 100866575 -2628399 + B4 SINE B4 8 35 -257 7 1354 2391 140 78 3 chr15 100866575 100866962 -2628012 - MTC LTR MaLR -1 420 5 7 1354 909 217 40 58 chr15 100866962 100867150 -2627824 + B4 SINE B4 36 228 -64 7 1354 1157 95 0 0 chr15 100867150 100867298 -2627676 + B1_Mus1 SINE Alu 1 148 0 7 1354 828 257 32 134 chr15 100867298 100867386 -2627588 + B4A SINE B4 230 289 -3 7 1354 378 132 0 0 chr15 100868120 100868196 -2626778 + (TTCC)n Simple_repeat Simple_repeat 3 78 0 7 1354 405 184 0 112 chr15 100868212 100868328 -2626646 + MT2B LTR ERVL 156 258 -343 7 1354 866 159 0 7 chr15 100868226 100868372 -2626602 + B1_Mur2 SINE Alu 5 149 0 7 1354 980 224 82 0 chr15 100868438 100868468 -2626506 - B3 SINE B2 -4 212 175 7 1354 351 0 0 0 chr15 100868468 100868507 -2626467 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1354 980 224 82 0 chr15 100868507 100868672 -2626302 - B3 SINE B2 -42 174 2 7 1354 889 213 76 5 chr15 100868673 100868871 -2626103 - B3 SINE B2 -3 213 2 7 1354 357 102 0 0 chr15 100871575 100871634 -2623340 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1354 306 73 0 0 chr15 100872205 100872246 -2622728 + (A)n Simple_repeat Simple_repeat 1 41 0 7 1354 22 0 0 0 chr15 100873330 100873352 -2621622 + AT_rich Low_complexity Low_complexity 1 22 0 7 1354 218 122 24 0 chr15 100874116 100874157 -2620817 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 1354 183 42 0 0 chr15 100874207 100874231 -2620743 + (TAA)n Simple_repeat Simple_repeat 1 24 0 7 1354 905 180 69 20 chr15 100875750 100875954 -2619020 + MIRb SINE MIR 2 215 -53 7 1354 23 0 0 0 chr15 100877097 100877120 -2617854 + GC_rich Low_complexity Low_complexity 1 23 0 7 1354 231 203 0 0 chr15 100877147 100877216 -2617758 + G-rich Low_complexity Low_complexity 5 73 0 7 1354 640 303 78 15 chr15 100878878 100879146 -2615828 - B4A SINE B4 -6 286 2 7 1354 2305 182 62 24 chr15 100879713 100880248 -2614726 + RLTR31_Mm LTR ERVK 1 555 -6 7 1354 210 71 0 0 chr15 100880271 100880299 -2614675 + (TCC)n Simple_repeat Simple_repeat 3 30 0 7 1354 28 61 0 0 chr15 100884086 100884135 -2610839 + GC_rich Low_complexity Low_complexity 1 49 0 7 1354 205 252 25 38 chr15 100884153 100884310 -2610664 + (CGCGG)n Simple_repeat Simple_repeat 3 157 0 7 1354 220 204 19 0 chr15 100884255 100884309 -2610665 + (CGG)n Simple_repeat Simple_repeat 2 56 0 7 1354 808 133 7 0 chr15 100885408 100885543 -2609431 + URR1B DNA MER1_type 90 225 0 7 1354 1440 84 5 10 chr15 100885564 100885757 -2609217 + B2_Mm2 SINE B2 1 192 -3 7 1354 245 251 0 22 chr15 100889228 100889411 -2605563 + (TG)n Simple_repeat Simple_repeat 1 179 0 7 1354 779 171 6 3 chr15 100889437 100889796 -2605178 + (TG)n Simple_repeat Simple_repeat 1 360 0 7 1354 269 182 36 0 chr15 100891245 100891300 -2603674 + ID_B1 SINE B4 80 136 -88 7 1354 340 146 0 0 chr15 100891252 100891307 -2603667 + B1_Mur4 SINE Alu 9 63 -87 8 1354 219 69 0 0 chr15 100891347 100891376 -2603598 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 8 1354 730 263 47 0 chr15 100891441 100891612 -2603362 - B3 SINE B2 -1 215 37 8 1354 270 0 0 0 chr15 100891633 100891663 -2603311 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 1354 317 348 71 0 chr15 100891664 100891805 -2603169 - B3 SINE B2 -40 176 26 8 1354 207 317 106 46 chr15 100892774 100892992 -2601982 + L2a LINE L2 1708 1938 -1481 8 1354 441 206 0 0 chr15 100893790 100893897 -2601077 + (TG)n Simple_repeat Simple_repeat 2 108 0 8 1354 534 240 0 0 chr15 100893961 100894132 -2600842 + (TG)n Simple_repeat Simple_repeat 1 171 0 8 1354 468 264 0 0 chr15 100894166 100894340 -2600634 + (TG)n Simple_repeat Simple_repeat 1 174 0 8 1354 1022 245 97 11 chr15 100894340 100894608 -2600366 - B4A SINE B4 0 292 2 8 1354 187 295 33 0 chr15 100894612 100894673 -2600301 + L2a LINE L2 2859 2921 -498 8 1354 262 266 181 0 chr15 100894875 100894969 -2600005 + L2a LINE L2 3300 3410 -16 8 1354 786 158 0 18 chr15 100895005 100895235 -2599739 + (TGGG)n Simple_repeat Simple_repeat 1 225 0 8 1354 242 314 112 8 chr15 100895948 100896073 -2598901 - MIR3 SINE MIR -59 149 12 8 1354 180 0 0 0 chr15 100896259 100896279 -2598695 + (CCCTAA)n Simple_repeat Simple_repeat 2 21 0 8 1354 472 277 47 0 chr15 100896458 100896606 -2598368 - MER3 DNA MER1_type 0 209 55 8 1354 390 21 0 0 chr15 100897432 100897479 -2597495 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1354 272 91 0 22 chr15 100897657 100897702 -2597272 + (TCCCC)n Simple_repeat Simple_repeat 1 44 0 8 1354 216 0 0 0 chr15 100898492 100898516 -2596458 + (A)n Simple_repeat Simple_repeat 1 24 0 8 1354 288 0 0 0 chr15 100898679 100898711 -2596263 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 1354 288 0 125 0 chr15 100899181 100899253 -2595721 + (CAGG)n Simple_repeat Simple_repeat 4 84 0 8 1354 268 293 50 0 chr15 100900922 100901021 -2593953 - Charlie4a DNA MER1_type -17 491 388 8 1354 432 280 119 15 chr15 100902380 100902514 -2592460 + B1F SINE Alu 1 148 -1 8 1354 403 300 12 85 chr15 100902654 100902818 -2592156 + ID_B1 SINE B4 25 176 -48 8 1354 599 178 9 0 chr15 100902730 100902837 -2592137 + PB1D9 SINE Alu 10 117 -3 8 1354 724 228 20 13 chr15 100903696 100903847 -2591127 + RSINE1 SINE B4 2 153 -12 8 1354 291 321 0 2 chr15 100904269 100904367 -2590607 + ID4_ SINE ID 2 98 -54 8 1354 591 179 9 0 chr15 100905101 100905207 -2589767 + B1_Mus2 SINE Alu 41 147 0 8 1354 276 242 16 0 chr15 100905209 100905271 -2589703 - ID4_ SINE ID -19 64 2 8 1354 475 278 0 9 chr15 100905467 100905576 -2589398 - PB1D10 SINE Alu -9 108 1 8 1354 251 343 56 35 chr15 100906440 100906727 -2588247 - L2c LINE L2 -128 3247 2955 8 1354 186 43 0 0 chr15 100907775 100907798 -2587176 + (CCCA)n Simple_repeat Simple_repeat 1 23 0 8 1354 184 216 0 0 chr15 100907914 100907951 -2587023 - MIR SINE MIR -6 256 220 8 1354 22 35 0 0 chr15 100908696 100908725 -2586249 + GC_rich Low_complexity Low_complexity 1 29 0 8 1354 189 141 20 61 chr15 100908987 100909085 -2585889 + (CCCCG)n Simple_repeat Simple_repeat 1 94 0 8 1354 261 0 0 0 chr15 100909561 100909590 -2585384 + (TG)n Simple_repeat Simple_repeat 1 29 0 8 1354 207 36 16 97 chr15 100912570 100912632 -2582342 + (CCCCCA)n Simple_repeat Simple_repeat 4 60 0 8 1354 591 253 13 13 chr15 100913296 100913437 -2581537 + PB1 SINE Alu 11 146 -1 8 1354 279 252 0 0 chr15 100913608 100913735 -2581239 + GA-rich Low_complexity Low_complexity 2 128 0 8 1354 211 245 20 0 chr15 100913767 100913816 -2581158 + B1F2 SINE Alu 42 91 -58 8 1354 251 250 0 0 chr15 100914007 100914063 -2580911 - B1_Mus2 SINE Alu -20 127 72 8 1354 225 65 0 0 chr15 100914080 100914111 -2580863 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 1354 334 316 97 53 chr15 100914112 100914339 -2580635 - L1ME4a LINE L1 -8 6116 5880 8 1354 258 32 0 0 chr15 100914369 100914400 -2580574 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 8 1354 832 85 17 8 chr15 100914400 100914519 -2580455 - PB1D9 SINE Alu 0 120 1 8 1354 297 0 0 0 chr15 100915769 100915802 -2579172 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1354 405 0 0 0 chr15 100915802 100915846 -2579128 + (GA)n Simple_repeat Simple_repeat 2 46 0 8 1354 1351 89 39 0 chr15 100916120 100916299 -2578675 - B2_Mm2 SINE B2 -8 187 2 8 1354 393 22 0 0 chr15 100916509 100916555 -2578419 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 8 1354 470 277 25 0 chr15 100916578 100916697 -2578277 - RSINE1 SINE B4 -41 124 3 8 1354 541 253 144 17 chr15 100916722 100916895 -2578079 - B3 SINE B2 -21 195 1 8 1354 253 278 125 16 chr15 100916914 100917042 -2577932 - B1F1 SINE Alu -7 142 1 8 1354 225 361 98 8 chr15 100917193 100917316 -2577658 - Kanga1 DNA Tc2 -218 1527 1394 8 1354 595 270 235 17 chr15 100917363 100917657 -2577317 - MLT1F1 LTR MaLR -2 567 210 8 1354 1709 217 34 43 chr15 100917735 100918150 -2576824 - MTC LTR MaLR -10 411 1 8 1354 286 281 84 23 chr15 100918150 100918264 -2576710 - Kanga1 DNA Tc2 -1586 159 36 8 1354 516 271 57 7 chr15 100918264 100918405 -2576569 + B1F SINE Alu 1 148 -1 8 1354 286 281 84 23 chr15 100918405 100918418 -2576556 - Kanga1 DNA Tc2 -1710 35 24 8 1354 412 339 67 110 chr15 100918537 100918911 -2576063 - ORR1E LTR MaLR 0 359 2 8 1354 334 115 0 0 chr15 100919349 100919401 -2575573 - HAL1-3A_ME LINE L1 -831 2027 1976 8 1354 542 138 0 9 chr15 100919430 100919540 -2575434 + (TG)n Simple_repeat Simple_repeat 2 110 0 8 1354 279 0 0 0 chr15 100919571 100919602 -2575372 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 1354 337 324 6 17 chr15 100919668 100919847 -2575127 + (TG)n Simple_repeat Simple_repeat 2 178 0 8 1354 414 0 0 0 chr15 100919874 100919920 -2575054 + (TG)n Simple_repeat Simple_repeat 2 47 0 8 1354 503 264 45 57 chr15 100919948 100920105 -2574869 - RSINE1 SINE B4 0 165 11 8 1354 226 385 15 44 chr15 100920532 100920668 -2574306 + MLT1L LTR MaLR 299 430 -180 8 1354 888 282 44 7 chr15 100921039 100921246 -2573728 + B4 SINE B4 8 220 -72 8 1354 792 165 123 50 chr15 100921246 100921425 -2573549 + B2_Mm2 SINE B2 1 192 -3 8 1354 888 282 44 7 chr15 100921425 100921492 -2573482 + B4 SINE B4 221 291 -1 8 1354 476 200 0 7 chr15 100921494 100921630 -2573344 + (CA)n Simple_repeat Simple_repeat 1 135 0 8 1354 350 328 16 0 chr15 100921630 100921755 -2573219 + HAL1-3A_ME LINE L1 1974 2100 -758 8 1354 275 219 0 165 chr15 100921938 100922032 -2572942 + PB1D9 SINE Alu 1 80 -70 8 1354 210 338 38 0 chr15 100922489 100922569 -2572405 + MIRb SINE MIR 173 255 -13 8 1354 194 231 100 25 chr15 100922693 100922773 -2572201 + L2c LINE L2 3101 3186 -201 8 1354 512 225 8 55 chr15 100924219 100924346 -2570628 + B3A SINE B2 1 121 -77 8 1354 599 39 0 13 chr15 100924354 100924433 -2570541 + (GA)n Simple_repeat Simple_repeat 2 79 0 8 1354 238 170 92 26 chr15 100924490 100924573 -2570401 + B1F SINE Alu 44 141 -8 8 1354 294 188 250 0 chr15 100925240 100925304 -2569670 - B1_Mur1 SINE Alu -30 119 40 8 1355 450 0 0 0 chr15 100925830 100925880 -2569094 + (TG)n Simple_repeat Simple_repeat 2 51 0 8 1355 581 219 33 8 chr15 100926314 100926434 -2568540 + ID_B1 SINE B4 87 209 -15 8 1355 371 193 0 12 chr15 100926458 100926542 -2568432 + GA-rich Low_complexity Low_complexity 2 84 0 8 1355 848 154 15 0 chr15 100926677 100926813 -2568161 + B1_Mur4 SINE Alu 2 139 -11 8 1355 180 0 0 0 chr15 100926813 100926833 -2568141 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 8 1355 220 196 0 0 chr15 100926834 100926880 -2568094 + (CAGAGA)n Simple_repeat Simple_repeat 4 49 0 8 1355 271 224 0 82 chr15 100926917 100926990 -2567984 - ID4 SINE ID -15 68 2 8 1355 184 77 0 49 chr15 100927504 100927545 -2567429 + (TGGGGG)n Simple_repeat Simple_repeat 3 41 0 8 1355 276 247 72 41 chr15 100927608 100927705 -2567269 - PB1D10 SINE Alu -3 114 15 8 1355 296 230 162 48 chr15 100927946 100928051 -2566923 - PB1D10 SINE Alu 0 117 1 8 1355 273 321 18 27 chr15 100929846 100929958 -2565016 - MIR SINE MIR -19 243 133 8 1355 216 194 0 0 chr15 100930196 100930232 -2564742 + B1_Mus2 SINE Alu 4 39 -108 8 1355 1367 124 0 0 chr15 100930259 100930461 -2564513 - URR1B DNA MER1_type -19 206 5 8 1355 444 99 0 0 chr15 100930479 100930550 -2564424 + (TA)n Simple_repeat Simple_repeat 1 71 0 8 1355 384 22 0 0 chr15 100930550 100930595 -2564379 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 1355 495 283 85 66 chr15 100930600 100930812 -2564162 - MT2B LTR ERVL -88 513 298 8 1355 637 90 0 0 chr15 100930799 100930888 -2564086 + B1_Mus1 SINE Alu 40 128 -20 8 1355 513 0 0 0 chr15 100930906 100930963 -2564011 + (GA)n Simple_repeat Simple_repeat 2 58 0 8 1355 677 224 5 134 chr15 100930986 100931187 -2563787 + Lx9 LINE L1 6725 6899 -745 8 1355 255 61 0 0 chr15 100931187 100931220 -2563754 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 8 1355 380 263 50 50 chr15 100931763 100931883 -2563091 - RSINE1 SINE B4 -44 121 2 8 1355 327 257 0 26 chr15 100931888 100931964 -2563010 - B4 SINE B4 -217 75 2 8 1355 274 272 65 37 chr15 100932573 100932680 -2562294 + L3 LINE CR1 2767 2876 -1613 8 1355 252 360 44 19 chr15 100932706 100932888 -2562086 + MIRc SINE MIR 18 202 -66 8 1355 210 287 234 0 chr15 100932914 100933008 -2561966 + PB1D10 SINE Alu 1 116 -1 8 1355 236 77 0 25 chr15 100933255 100933295 -2561679 + (TA)n Simple_repeat Simple_repeat 2 40 0 8 1355 809 221 0 74 chr15 100933300 100933476 -2561498 - RSINE1 SINE B4 0 165 3 8 1355 372 238 0 12 chr15 100934816 100934897 -2560077 + B3 SINE B2 4 83 -133 8 1355 1068 141 0 0 chr15 100934930 100935107 -2559867 + (CA)n Simple_repeat Simple_repeat 2 178 0 8 1355 893 245 45 10 chr15 100935134 100935336 -2559638 + B3 SINE B2 1 209 -7 8 1355 303 203 0 0 chr15 100935386 100935455 -2559519 + GA-rich Low_complexity Low_complexity 2 70 0 9 1355 411 303 0 0 chr15 100935457 100935556 -2559418 - PB1D7 SINE Alu -12 108 10 9 1355 679 165 132 16 chr15 100936376 100936505 -2558469 - B1_Mus1 SINE Alu -4 144 1 9 1355 272 299 41 10 chr15 100936631 100936729 -2558245 + MER5B DNA MER1_type 1 101 -77 9 1355 263 186 119 0 chr15 100936953 100937012 -2557962 - ID4_ SINE ID -16 67 2 9 1355 31 44 0 0 chr15 100937018 100937063 -2557911 + AT_rich Low_complexity Low_complexity 1 45 0 9 1355 1408 75 0 16 chr15 100937074 100937263 -2557711 + B2_Mm2 SINE B2 3 188 -7 9 1355 1414 81 0 21 chr15 100937264 100937454 -2557520 - B2_Mm2 SINE B2 -9 186 1 9 1355 950 240 5 20 chr15 100937483 100937683 -2557291 - B3 SINE B2 -19 197 1 9 1355 267 31 0 0 chr15 100937702 100937734 -2557240 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 1355 321 117 0 0 chr15 100937734 100937794 -2557180 + (GA)n Simple_repeat Simple_repeat 2 61 0 9 1355 620 304 20 30 chr15 100937816 100938016 -2556958 - B4 SINE B4 -52 240 43 9 1355 610 251 73 90 chr15 100938307 100938775 -2556199 - RMER4B LTR ERVK -14 452 17 9 1355 869 123 0 8 chr15 100938778 100938909 -2556065 + B2_Mm2 SINE B2 2 131 -64 9 1355 424 279 0 0 chr15 100939100 100939204 -2555770 - PB1D10 SINE Alu -2 115 12 9 1355 708 220 14 7 chr15 100939228 100939370 -2555604 - B1_Mur2 SINE Alu -1 148 6 9 1355 270 0 0 0 chr15 100939370 100939400 -2555574 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 9 1355 710 184 25 19 chr15 100939400 100939561 -2555413 - B2_Mm2 SINE B2 -11 184 23 9 1355 608 174 43 9 chr15 100939571 100939687 -2555287 - PB1D9 SINE Alu 0 120 1 9 1355 221 0 35 0 chr15 100939699 100939728 -2555246 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 9 1355 349 327 48 36 chr15 100939728 100939893 -2555081 - L1M LINE L1 -811 5429 5263 9 1355 1508 225 95 0 chr15 100940138 100940476 -2554498 - Lx8 LINE L1 -467 7006 6637 9 1355 340 238 24 0 chr15 100940738 100940822 -2554152 + B4 SINE B4 1 86 -206 9 1355 234 285 170 2 chr15 100940812 100940969 -2554005 - MLT1A LTR MaLR -84 290 100 9 1355 422 248 119 40 chr15 100941145 100941296 -2553678 + RSINE1 SINE B4 3 165 0 9 1355 318 290 60 87 chr15 100941885 100942070 -2552904 - MLT1A LTR MaLR -86 288 109 9 1355 359 197 0 14 chr15 100942076 100942148 -2552826 - ID2 SINE ID -4 79 9 9 1355 917 298 91 22 chr15 100942438 100942851 -2552123 - L1MA8 LINE L1 -355 5936 5463 9 1355 453 170 112 35 chr15 100942885 100943001 -2551973 - B1_Mur4 SINE Alu -1 149 25 9 1355 375 258 43 0 chr15 100942952 100943045 -2551929 + MTE2b LTR MaLR 239 335 -44 9 1355 235 186 0 0 chr15 100943045 100943088 -2551886 + L1M5 LINE L1 5750 5792 -402 9 1355 347 155 0 0 chr15 100944230 100944288 -2550686 + B1_Mur2 SINE Alu 41 98 -51 9 1355 532 184 267 20 chr15 100944330 100944480 -2550494 + B2_Mm2 SINE B2 1 187 -8 9 1355 1181 68 7 0 chr15 100944480 100944626 -2550348 + B1_Mus1 SINE Alu 1 148 0 9 1355 240 59 0 0 chr15 100944648 100944682 -2550292 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 9 1355 492 271 0 0 chr15 100944690 100944812 -2550162 + ID_B1 SINE B4 102 223 -1 9 1355 37 52 0 0 chr15 100945130 100945188 -2549786 + AT_rich Low_complexity Low_complexity 1 58 0 9 1355 1004 238 10 5 chr15 100945188 100945395 -2549579 - B3 SINE B2 -8 208 1 9 1355 3303 41 28 0 chr15 100945534 100945923 -2549051 + MTB LTR MaLR 1 400 0 9 1355 180 104 0 77 chr15 100947152 100947204 -2547770 + (CACCC)n Simple_repeat Simple_repeat 3 50 0 9 1355 240 209 14 43 chr15 100947712 100947782 -2547192 + C-rich Low_complexity Low_complexity 4 71 0 9 1355 249 261 73 0 chr15 100947804 100947969 -2547005 + (GTATG)n Simple_repeat Simple_repeat 3 179 0 9 1355 1228 68 0 0 chr15 100948036 100948184 -2546790 + B1_Mus1 SINE Alu 1 148 0 9 1355 300 336 124 0 chr15 100950479 100950616 -2544358 + MTEa LTR MaLR 2 155 -224 9 1355 1158 171 34 0 chr15 100950616 100950821 -2544153 + B3 SINE B2 5 216 0 9 1355 1128 104 17 0 chr15 100950835 100951008 -2543966 + B2_Mm2 SINE B2 20 195 0 9 1355 727 159 98 8 chr15 100951044 100951177 -2543797 + B1_Mus2 SINE Alu 3 147 0 9 1355 813 151 6 16 chr15 100951331 100951513 -2543461 + CT-rich Low_complexity Low_complexity 1 180 0 9 1355 608 175 57 32 chr15 100951992 100952116 -2542858 + B3 SINE B2 1 127 -89 9 1355 257 363 89 0 chr15 100952120 100952266 -2542708 - MIRm SINE MIR -114 162 4 9 1355 729 129 0 119 chr15 100952783 100952942 -2542032 + ORR1A4 LTR MaLR 1 140 -189 9 1355 433 305 11 1 chr15 100954642 100954794 -2540180 + B4A SINE B4 1 160 -132 9 1355 225 65 0 0 chr15 100954819 100954850 -2540124 + (TATAA)n Simple_repeat Simple_repeat 2 32 0 9 1355 672 247 43 55 chr15 100954899 100955062 -2539912 + RSINE1 SINE B4 3 163 -2 9 1355 180 0 0 0 chr15 100955095 100955115 -2539859 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 9 1355 392 276 56 16 chr15 100955138 100955263 -2539711 - B1F SINE Alu -19 130 1 9 1355 1683 180 141 9 chr15 100955285 100955611 -2539363 + ORR1D1 LTR MaLR 4 372 -2 9 1355 199 250 33 0 chr15 100955797 100955857 -2539117 - MIRc SINE MIR -89 179 118 9 1355 320 273 0 33 chr15 100956349 100956440 -2538534 - MIR3 SINE MIR -15 193 106 9 1355 340 272 32 95 chr15 100956810 100956936 -2538038 - MER45A DNA Tip100 -3 175 58 9 1355 268 296 56 0 chr15 100956987 100957095 -2537879 + PB1D10 SINE Alu 4 117 0 9 1355 243 0 0 0 chr15 100957095 100957122 -2537852 + (CAAAAA)n Simple_repeat Simple_repeat 6 32 0 9 1355 210 242 94 52 chr15 100957311 100957407 -2537567 - L3b LINE CR1 -243 239 140 9 1355 206 0 69 0 chr15 100960357 100960386 -2534588 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 1355 214 190 16 79 chr15 100960441 100960504 -2534470 - B1F1 SINE Alu -90 59 1 9 1355 231 164 36 18 chr15 100960655 100960711 -2534263 - RLTR13D3 LTR ERVK -48 1066 1010 9 1355 328 281 65 16 chr15 100960743 100960866 -2534108 - ETnERV2-int LTR ERVK -7218 188 60 9 1355 1012 320 128 3 chr15 100960995 100961096 -2533878 + Tigger7 DNA MER2_type 2 110 -2381 9 1355 423 38 0 0 chr15 100961096 100961149 -2533825 + (TA)n Simple_repeat Simple_repeat 1 53 0 9 1355 1012 321 108 36 chr15 100961149 100961598 -2533376 + Tigger7 DNA MER2_type 110 550 0 9 1355 297 75 0 0 chr15 100962728 100962768 -2532206 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 9 1355 234 289 17 126 chr15 100962791 100962910 -2532064 - PB1D10 SINE Alu 0 117 12 9 1355 1072 51 0 42 chr15 100963985 100964129 -2530845 - B1_Mus1 SINE Alu -10 138 1 9 1355 468 312 12 42 chr15 100964230 100964397 -2530577 + RSINE1 SINE B4 3 164 -1 9 1355 414 0 0 0 chr15 100965328 100965374 -2529600 + (CCA)n Simple_repeat Simple_repeat 3 48 0 9 1355 446 245 157 0 chr15 100966916 100967018 -2527956 + RSINE1 SINE B4 16 133 -32 9 1355 270 0 0 0 chr15 100967036 100967066 -2527908 + (CA)n Simple_repeat Simple_repeat 1 30 0 9 1355 400 341 39 45 chr15 100967107 100967285 -2527689 + B4 SINE B4 47 223 -69 9 1355 754 149 52 7 chr15 100967153 100967288 -2527686 + B1_Mur1 SINE Alu 9 149 0 9 1355 692 172 0 0 chr15 100968186 100968302 -2526672 + B1_Mus2 SINE Alu 24 139 -8 9 1355 414 0 0 0 chr15 100968857 100968903 -2526071 + (TG)n Simple_repeat Simple_repeat 2 47 0 9 1355 245 310 0 14 chr15 100969095 100969167 -2525807 + ID4 SINE ID 2 72 -11 9 1355 200 287 228 0 chr15 100969331 100969432 -2525542 + MIR SINE MIR 101 224 -38 9 1355 367 181 39 53 chr15 100969441 100969536 -2525438 + B1_Mus2 SINE Alu 24 128 -21 9 1355 264 289 8 8 chr15 100969831 100969953 -2525021 + (CTGTG)n Simple_repeat Simple_repeat 4 125 0 9 1355 200 343 126 29 chr15 100970905 100971079 -2523895 + MIRb SINE MIR 61 251 -17 9 1355 1014 41 53 0 chr15 100971670 100971839 -2523135 + (CTGGGG)n Simple_repeat Simple_repeat 1 178 0 9 1355 241 347 0 0 chr15 100972116 100972123 -2522851 + (CATA)n Simple_repeat Simple_repeat 2 8 0 9 1355 1266 41 0 0 chr15 100972123 100972270 -2522704 + B1_Mm SINE Alu 1 147 0 9 1355 241 347 0 0 chr15 100972270 100972357 -2522617 + (CATA)n Simple_repeat Simple_repeat 1 87 0 9 1355 714 178 19 64 chr15 100972437 100972593 -2522381 - B1_Mur1 SINE Alu 0 149 1 9 1355 941 139 7 27 chr15 100972625 100972773 -2522201 + B1_Mus2 SINE Alu 2 146 -1 9 1355 232 167 0 91 chr15 100972868 100972934 -2522040 + C-rich Low_complexity Low_complexity 5 64 0 9 1355 232 403 0 7 chr15 100973390 100973485 -2521489 + C-rich Low_complexity Low_complexity 59 153 0 9 1355 697 182 66 0 chr15 100973485 100973622 -2521352 - B1_Mus1 SINE Alu -2 146 1 9 1355 232 403 0 7 chr15 100973622 100973676 -2521298 + C-rich Low_complexity Low_complexity 5 58 0 9 1355 568 250 16 8 chr15 100977259 100977388 -2517586 + ID_B1 SINE B4 69 198 -26 9 1355 261 139 0 0 chr15 100977995 100978038 -2516936 + (GGA)n Simple_repeat Simple_repeat 3 45 0 9 1355 216 0 0 0 chr15 100979283 100979307 -2515667 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1355 306 256 13 0 chr15 100979405 100979483 -2515491 + ID2 SINE ID 5 83 0 9 1355 1149 195 39 5 chr15 100979494 100979700 -2515274 + B3 SINE B2 1 213 -3 9 1355 1258 141 5 5 chr15 100979730 100979922 -2515052 + B2_Mm2 SINE B2 1 192 -3 1 1355 1294 98 54 0 chr15 100980049 100980233 -2514741 - B2_Mm2 SINE B2 0 195 2 1 1355 454 204 87 0 chr15 100980271 100980374 -2514600 + B3A SINE B2 22 133 -65 1 1355 312 266 14 20 chr15 100980416 100980528 -2514446 - ID4 SINE ID -44 108 1 1 1355 266 313 138 30 chr15 100980644 100981013 -2513961 - L1MC4a LINE L1 -1853 6029 5621 1 1355 246 81 0 0 chr15 100981157 100981194 -2513780 + (CAAAAA)n Simple_repeat Simple_repeat 3 39 0 1 1355 591 219 89 0 chr15 100981202 100981325 -2513649 + B1_Mus2 SINE Alu 1 134 -13 1 1355 206 219 0 15 chr15 100981328 100981393 -2513581 + (TA)n Simple_repeat Simple_repeat 1 64 0 1 1355 390 214 159 0 chr15 100981648 100981774 -2513200 + B1F SINE Alu 1 146 -3 1 1355 237 291 54 54 chr15 100981795 100981962 -2513012 + L1ME5 LINE L1 5877 6043 -151 1 1355 399 258 0 21 chr15 100982289 100982384 -2512590 + ID_B1 SINE B4 110 202 -22 1 1355 283 307 28 56 chr15 100982384 100982396 -2512578 + B1F SINE Alu 29 132 -17 1 1355 516 16 0 0 chr15 100982404 100982465 -2512509 + (TAGA)n Simple_repeat Simple_repeat 3 63 0 1 1355 216 0 0 0 chr15 100982502 100982526 -2512448 + (CAGA)n Simple_repeat Simple_repeat 1 24 0 1 1355 318 296 0 0 chr15 100983270 100983351 -2511623 + ID_B1 SINE B4 123 203 -21 1 1355 201 74 0 0 chr15 100983360 100983387 -2511587 + (GGAA)n Simple_repeat Simple_repeat 3 29 0 1 1355 340 200 104 57 chr15 100983620 100983726 -2511248 - PB1D10 SINE Alu -6 111 1 1 1355 251 293 197 10 chr15 100983802 100983995 -2510979 + L2c LINE L2 1825 2053 -1366 1 1355 447 218 0 0 chr15 100984193 100984280 -2510694 - ID_B1 SINE B4 -2 222 136 1 1355 270 265 190 2 chr15 100984729 100984883 -2510091 + L2c LINE L2 2936 3111 -276 1 1355 818 260 38 19 chr15 100985619 100985831 -2509143 + ID_B1 SINE B4 1 216 -8 1 1355 383 291 17 17 chr15 100985872 100986000 -2508974 + B1F SINE Alu 1 128 -21 1 1355 426 197 7 35 chr15 100986096 100986238 -2508736 + CT-rich Low_complexity Low_complexity 4 141 0 1 1355 378 0 0 0 chr15 100986492 100986534 -2508440 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1355 2969 237 40 34 chr15 100986537 100987021 -2507953 - Lx7 LINE L1 -343 7353 6877 1 1355 1586 173 166 3 chr15 100987021 100987340 -2507634 + ORR1D1 LTR MaLR 3 373 -1 1 1355 2969 237 40 34 chr15 100987340 100987623 -2507351 - Lx7 LINE L1 -820 6876 6581 1 1355 287 313 0 0 chr15 100987624 100987691 -2507283 - B1F2 SINE Alu -81 68 2 1 1355 566 258 8 0 chr15 100987693 100987817 -2507157 - ID_B1 SINE B4 -14 210 86 1 1355 518 233 104 15 chr15 100988217 100988352 -2506622 - B1_Mur3 SINE Alu 0 149 3 1 1355 1407 94 16 10 chr15 100988425 100988618 -2506356 + B2_Mm2 SINE B2 2 195 0 1 1355 383 292 229 33 chr15 100988667 100988720 -2506254 - L1ME4a LINE L1 -1 6123 6073 1 1355 672 183 107 0 chr15 100988720 100988851 -2506123 + B1_Mur2 SINE Alu 5 149 0 1 1355 383 292 229 33 chr15 100988851 100989041 -2505933 - L1ME4a LINE L1 -52 6072 5832 1 1355 296 257 0 0 chr15 100989045 100989115 -2505859 - tRNA-Ala-GCY_ tRNA tRNA -4 71 2 1 1355 752 275 42 28 chr15 100989287 100989500 -2505474 + B3 SINE B2 1 216 0 1 1355 1528 35 25 20 chr15 100989512 100989715 -2505259 + L1Md_F3 LINE L1 6381 6584 0 1 1355 1263 164 26 26 chr15 100989962 100990188 -2504786 + URR1A DNA MER1_type 1 226 0 1 1355 272 27 27 0 chr15 100990235 100990272 -2504702 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 1 1355 228 303 44 11 chr15 100990339 100990429 -2504545 + MIRb SINE MIR 81 173 -95 1 1355 387 284 82 0 chr15 100990560 100990694 -2504280 + ID_B1 SINE B4 80 224 0 1 1355 733 169 11 22 chr15 100990696 100990878 -2504096 + GA-rich Low_complexity Low_complexity 1 180 0 1 1355 232 0 77 26 chr15 100990976 100991015 -2503959 + (TGGGGG)n Simple_repeat Simple_repeat 5 45 0 1 1355 244 375 35 9 chr15 100991380 100991493 -2503481 - MIR SINE MIR -52 210 95 1 1355 322 277 56 93 chr15 100991528 100991631 -2503343 + MT2B LTR ERVL 63 157 -444 1 1355 733 174 20 20 chr15 100991631 100991778 -2503196 + B1_Mur1 SINE Alu 3 149 0 1 1355 345 344 15 20 chr15 100991790 100991944 -2503030 - MIRb SINE MIR -109 159 7 1 1355 356 135 14 0 chr15 100994122 100994196 -2500778 + (TC)n Simple_repeat Simple_repeat 1 75 0 1 1355 513 298 0 40 chr15 100995168 100995443 -2499531 + C-rich Low_complexity Low_complexity 1 263 0 1 1355 196 327 28 73 chr15 100995733 100995842 -2499132 + MIRm SINE MIR 41 148 -128 1 1355 740 141 133 0 chr15 100995851 100995979 -2498995 + B1_Mus2 SINE Alu 1 145 -2 1 1355 536 318 118 22 chr15 100997237 100997465 -2497509 - L1MEe LINE L1 -3931 923 674 1 1355 425 270 225 13 chr15 100998102 100998338 -2496636 - RMER15 LTR ERVL -14 561 276 1 1355 216 211 135 0 chr15 100998459 100998511 -2496463 - ID4 SINE ID -12 71 13 1 1355 23 0 0 0 chr15 100999260 100999283 -2495691 + AT_rich Low_complexity Low_complexity 1 23 0 1 1355 680 304 14 19 chr15 100999287 100999495 -2495479 - B3 SINE B2 -8 208 2 1 1355 2272 102 9 18 chr15 101000079 101000409 -2494565 - ORR1A2 LTR MaLR 0 327 1 1 1355 471 331 82 8 chr15 101000409 101000677 -2494297 + L1MA6 LINE L1 5980 6267 -33 2 1355 197 347 66 25 chr15 101001246 101001367 -2493607 - MIR3 SINE MIR -70 138 13 3 1355 518 260 32 0 chr15 101001582 101001705 -2493269 + ID_B1 SINE B4 98 224 0 4 1355 233 200 37 206 chr15 101001700 101001807 -2493167 + MT2B LTR ERVL 152 240 -361 5 1355 456 125 12 128 chr15 101001716 101001833 -2493141 + B1_Mur4 SINE Alu 9 120 0 6 1355 194 161 0 46 chr15 101001833 101001898 -2493076 + A-rich Low_complexity Low_complexity 1 62 0 7 1355 234 364 0 0 chr15 101002045 101002111 -2492863 - B4A SINE B4 -10 282 217 8 1355 556 139 56 0 chr15 101002111 101002255 -2492719 + (TCTA)n Simple_repeat Simple_repeat 2 153 0 9 1355 630 301 12 6 chr15 101002426 101002593 -2492381 - B4A SINE B4 -120 172 5 8 1355 253 43 21 42 chr15 101003099 101003147 -2491827 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1 1355 548 113 31 0 chr15 101003147 101003244 -2491730 - B1_Mur4 SINE Alu -10 140 41 1 1355 542 189 19 19 chr15 101003519 101003627 -2491347 + PB1D9 SINE Alu 12 119 -1 1 1355 254 323 154 46 chr15 101003627 101003694 -2491280 + B4 SINE B4 97 290 -2 1 1355 342 312 133 15 chr15 101003769 101004039 -2490935 - L1ME4a LINE L1 -284 5840 5539 1 1355 30 69 0 0 chr15 101004373 101004431 -2490543 + GC_rich Low_complexity Low_complexity 1 58 0 1 1355 206 81 27 0 chr15 101004485 101004522 -2490452 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 1 1355 22 0 0 0 chr15 101004522 101004544 -2490430 + GC_rich Low_complexity Low_complexity 1 22 0 1 1355 22 35 0 0 chr15 101004775 101004804 -2490170 + GC_rich Low_complexity Low_complexity 1 29 0 1 1355 375 113 0 0 chr15 101005950 101006021 -2488953 + (TG)n Simple_repeat Simple_repeat 1 71 0 1 1355 309 51 0 0 chr15 101006032 101006071 -2488903 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1355 189 0 0 0 chr15 101007450 101007471 -2487503 + (GGGA)n Simple_repeat Simple_repeat 2 22 0 2 1355 208 254 48 0 chr15 101007505 101007568 -2487406 + MIR SINE MIR 86 151 -111 2 1355 449 138 0 12 chr15 101008189 101008270 -2486704 + (GGGGA)n Simple_repeat Simple_repeat 4 83 0 2 1355 199 333 11 87 chr15 101009234 101009326 -2485648 - L2a LINE L2 -36 3390 3306 2 1355 1236 226 78 17 chr15 101009457 101009803 -2485171 + MER82 DNA MER2_type 22 388 -265 2 1355 806 244 135 40 chr15 101010164 101010416 -2484558 - B4A SINE B4 -16 276 1 2 1355 431 339 63 47 chr15 101010838 101011171 -2483803 + MLT1E1A LTR MaLR 223 529 -151 2 1355 836 205 62 48 chr15 101012472 101012682 -2482292 - B3 SINE B2 -2 214 2 2 1355 234 0 0 0 chr15 101013543 101013569 -2481405 + (CCCCCA)n Simple_repeat Simple_repeat 1 26 0 2 1355 330 210 71 36 chr15 101013592 101013676 -2481298 + PB1D10 SINE Alu 29 115 -2 3 1355 307 291 42 17 chr15 101013676 101013795 -2481179 + RSINE1 SINE B4 9 130 -35 3 1355 507 186 64 11 chr15 101013942 101014085 -2480889 + L1MB5 LINE L1 5730 5888 -285 3 1355 260 314 94 19 chr15 101014123 101014282 -2480692 + L1MB5 LINE L1 5967 6137 -37 3 1355 948 220 28 41 chr15 101014626 101014844 -2480130 - B3 SINE B2 0 216 2 3 1355 472 271 41 0 chr15 101014848 101014970 -2480004 - B1_Mur1 SINE Alu -11 138 12 3 1355 258 322 48 45 chr15 101014970 101015051 -2479923 - ID_B1 SINE B4 0 224 10 3 1355 220 230 47 47 chr15 101014994 101015058 -2479916 - B1F SINE Alu -9 140 77 3 1355 524 248 52 15 chr15 101015197 101015332 -2479642 + RSINE1 SINE B4 2 141 -24 3 1355 247 299 114 54 chr15 101015332 101015381 -2479593 + B2_Mm2 SINE B2 1 195 0 3 1355 469 270 89 44 chr15 101015730 101016001 -2478973 - L1M4 LINE L1 -1234 4912 4630 3 1355 827 250 5 53 chr15 101016059 101016266 -2478708 + B3A SINE B2 2 198 0 4 1355 923 162 0 33 chr15 101016292 101016445 -2478529 + B1_Mur2 SINE Alu 1 148 -1 4 1355 241 180 33 44 chr15 101016831 101017011 -2477963 + (CA)n Simple_repeat Simple_repeat 1 178 0 4 1355 483 290 0 30 chr15 101017516 101017651 -2477323 + RSINE1 SINE B4 23 153 -12 4 1355 207 100 0 0 chr15 101017655 101017685 -2477289 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1355 437 219 76 0 chr15 101017886 101017991 -2476983 + PB1D10 SINE Alu 5 117 0 4 1355 1010 201 52 0 chr15 101017995 101018189 -2476785 + B3 SINE B2 1 204 -12 4 1355 336 291 68 0 chr15 101018209 101018312 -2476662 + PB1D10 SINE Alu 1 110 -7 4 1355 259 244 134 52 chr15 101018325 101018459 -2476515 + L1MC5 LINE L1 7299 7443 -518 4 1355 476 272 58 7 chr15 101018879 101019016 -2475958 - RSINE1 SINE B4 -21 144 1 4 1355 225 271 0 0 chr15 101019959 101020007 -2474967 + ID4 SINE ID 14 61 -22 5 1355 256 259 12 36 chr15 101020729 101020813 -2474161 - BC1_Mm scRNA scRNA -45 107 26 5 1355 217 277 27 76 chr15 101021360 101021462 -2473512 - MIRm SINE MIR -25 183 82 5 1355 414 192 91 0 chr15 101022588 101022687 -2472287 + PB1D10 SINE Alu 1 108 -9 5 1355 369 75 0 0 chr15 101023603 101023656 -2471318 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1355 250 333 0 0 chr15 101023723 101023789 -2471185 - MIRc SINE MIR -37 231 166 5 1355 406 248 6 144 chr15 101026131 101026150 -2468824 + ID_B1 SINE B4 68 217 -7 5 1355 562 237 7 103 chr15 101026150 101026305 -2468669 + B1F1 SINE Alu 3 142 -7 5 1355 1074 140 0 0 chr15 101026331 101026510 -2468464 + (CTG)n Simple_repeat Simple_repeat 1 179 0 5 1355 297 183 0 0 chr15 101026510 101026570 -2468404 + (TTG)n Simple_repeat Simple_repeat 1 60 0 5 1355 576 237 64 124 chr15 101027504 101027662 -2467312 - B3A SINE B2 -6 192 38 6 1355 270 81 0 0 chr15 101027662 101027699 -2467275 + (CTTG)n Simple_repeat Simple_repeat 2 38 0 6 1355 684 246 22 0 chr15 101027699 101027833 -2467141 - B1_Mur2 SINE Alu -8 141 5 6 1355 576 237 64 124 chr15 101027833 101027875 -2467099 - B3A SINE B2 -161 37 4 6 1355 477 164 16 53 chr15 101029960 101030147 -2464827 + CT-rich Low_complexity Low_complexity 1 180 0 6 1355 501 17 0 0 chr15 101030349 101030407 -2464567 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 1355 327 287 40 0 chr15 101030430 101030531 -2464443 + B3 SINE B2 97 201 -15 6 1355 390 144 0 108 chr15 101031587 101031680 -2463294 + MT2B LTR ERVL 166 248 -353 6 1355 673 78 179 17 chr15 101031598 101031715 -2463259 + B1_Mus1 SINE Alu 13 148 0 6 1355 1146 129 37 21 chr15 101031725 101031915 -2463059 + B2_Mm2 SINE B2 2 194 -1 6 1355 569 264 122 20 chr15 101032050 101032247 -2462727 - ORR1D1 LTR MaLR -157 217 1 6 1355 1220 68 0 0 chr15 101033772 101033919 -2461055 + B1_Mus2 SINE Alu 1 147 0 7 1355 735 221 27 14 chr15 101033963 101034110 -2460864 + B1_Mur3 SINE Alu 1 149 0 7 1355 198 0 0 0 chr15 101035650 101035672 -2459302 + (GTTTG)n Simple_repeat Simple_repeat 2 23 0 7 1355 496 136 224 56 chr15 101035672 101035797 -2459177 - B1_Mus1 SINE Alu -2 146 1 7 1355 475 73 76 22 chr15 101036006 101036229 -2458745 + (TATAG)n Simple_repeat Simple_repeat 1 234 0 7 1355 2749 179 34 58 chr15 101036311 101036893 -2458081 - RLTR12A LTR ERVK 0 568 1 7 1355 376 229 540 5 chr15 101036923 101037112 -2457862 - B4A SINE B4 0 292 3 7 1355 441 272 64 17 chr15 101037244 101037425 -2457549 - MIR SINE MIR -58 204 20 7 1355 321 229 36 12 chr15 101037941 101038025 -2456949 + PB1D10 SINE Alu 32 117 0 7 1355 251 206 0 52 chr15 101038737 101038805 -2456169 + B1F SINE Alu 80 144 -5 7 1355 502 156 41 20 chr15 101039018 101039116 -2455858 + B1_Mur2 SINE Alu 48 147 -2 8 1355 276 53 0 0 chr15 101041869 101041907 -2453067 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 1355 210 91 0 0 chr15 101042692 101042725 -2452249 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 8 1355 261 83 0 0 chr15 101044828 101044864 -2450110 + (T)n Simple_repeat Simple_repeat 1 36 0 8 1355 1232 61 0 0 chr15 101044864 101045011 -2449963 - B1_Mus1 SINE Alu 0 148 2 8 1355 395 302 113 52 chr15 101046136 101046349 -2448625 - MLT2C1 LTR ERVL -20 377 152 8 1355 228 279 70 81 chr15 101046349 101046435 -2448539 + ORR1E LTR MaLR 1 85 -274 8 1355 232 152 25 27 chr15 101046515 101046588 -2448386 + B1_Mus2 SINE Alu 80 149 0 8 1355 654 277 152 98 chr15 101046597 101046933 -2448041 - MTE2b LTR MaLR -25 354 1 8 1355 207 196 0 0 chr15 101046960 101047006 -2447968 + T-rich Low_complexity Low_complexity 1 46 0 8 1355 234 0 0 0 chr15 101047031 101047057 -2447917 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 9 1355 571 79 0 0 chr15 101047057 101047133 -2447841 - B1_Mus2 SINE Alu -15 132 57 9 1355 267 179 26 29 chr15 101047127 101047253 -2447721 + B3 SINE B2 64 216 0 9 1355 22 0 0 0 chr15 101047703 101047725 -2447249 + AT_rich Low_complexity Low_complexity 1 22 0 9 1355 225 94 0 0 chr15 101047864 101047896 -2447078 + B1_Mur2 SINE Alu 62 93 -56 9 1355 425 192 143 9 chr15 101047911 101048016 -2446958 + B3 SINE B2 97 215 -1 9 1355 397 214 71 0 chr15 101048463 101048547 -2446427 + ID_B1 SINE B4 129 218 -6 9 1355 1478 69 21 0 chr15 101048619 101048808 -2446166 - B2_Mm1a SINE B2 0 193 1 9 1355 545 114 0 33 chr15 101048810 101048901 -2446073 + B1_Mur4 SINE Alu 63 150 0 9 1355 189 0 0 0 chr15 101048916 101048937 -2446037 + (CA)n Simple_repeat Simple_repeat 2 22 0 9 1355 441 0 0 0 chr15 101048937 101048985 -2445989 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 1355 693 184 34 41 chr15 101049091 101049238 -2445736 + B1_Mur1 SINE Alu 3 148 -1 1 1355 2222 86 13 0 chr15 101049304 101049619 -2445355 + ORR1A2 LTR MaLR 1 319 -8 1 1355 607 197 14 25 chr15 101049699 101049841 -2445133 - PB1D9 SINE Alu 0 150 5 1 1355 468 311 100 0 chr15 101049842 101050022 -2444952 - MLT1A0 LTR MaLR -42 323 126 1 1355 2230 142 11 60 chr15 101050019 101050370 -2444604 - MTC LTR MaLR -8 413 82 1 1355 859 138 43 21 chr15 101050370 101050511 -2444463 - B1_Mur4 SINE Alu -6 144 1 1 1355 2230 142 11 60 chr15 101050511 101050593 -2444381 - MTC LTR MaLR -340 81 1 1 1355 275 289 30 91 chr15 101050593 101050692 -2444282 - MLT1A0 LTR MaLR -270 138 46 1 1355 197 65 0 31 chr15 101051572 101051604 -2443370 + (TCCCC)n Simple_repeat Simple_repeat 1 31 0 1 1355 186 182 0 0 chr15 101052595 101052628 -2442346 + MIR3 SINE MIR 167 199 -9 1 1355 360 307 135 17 chr15 101053490 101053667 -2441307 + MIR SINE MIR 2 214 -54 1 1356 435 332 56 23 chr15 101057946 101058034 -2436940 + MER58A DNA MER1_type 1 94 -130 1 1356 354 45 0 0 chr15 101058034 101058078 -2436896 + (TTG)n Simple_repeat Simple_repeat 2 45 0 1 1356 640 162 9 35 chr15 101058083 101058198 -2436776 - PB1D9 SINE Alu -8 112 1 1 1356 435 332 56 23 chr15 101058198 101058319 -2436655 + MER58A DNA MER1_type 100 223 -1 1 1356 367 206 167 56 chr15 101059100 101059208 -2435766 - PB1D7 SINE Alu 0 120 1 1 1356 789 169 6 57 chr15 101060459 101060616 -2434358 - B1_Mur3 SINE Alu 0 149 1 1 1356 882 135 0 21 chr15 101060643 101060787 -2434187 - B1_Mur3 SINE Alu 0 149 9 1 1356 391 169 85 53 chr15 101061656 101061750 -2433224 + B1_Mur4 SINE Alu 22 118 -32 1 1356 37 0 0 0 chr15 101062271 101062308 -2432666 + GC_rich Low_complexity Low_complexity 1 37 0 1 1356 357 75 0 0 chr15 101062878 101062931 -2432043 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1356 190 278 37 0 chr15 101064137 101064191 -2430783 - MIR SINE MIR -118 90 35 1 1356 554 184 0 66 chr15 101064383 101064505 -2430469 + ID_B1 SINE B4 111 224 0 1 1356 274 322 56 40 chr15 101064521 101064647 -2430327 + RSINE1 SINE B4 21 148 -17 1 1356 273 349 73 0 chr15 101064699 101064711 -2430263 - B4 SINE B4 -76 216 100 1 1356 531 175 10 0 chr15 101064711 101064808 -2430166 - PB1D10 SINE Alu -5 112 15 1 1356 207 0 0 0 chr15 101064811 101064834 -2430140 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1356 545 115 50 40 chr15 101064839 101064939 -2430035 - B1_Mur4 SINE Alu -7 143 43 1 1356 189 0 0 0 chr15 101065040 101065061 -2429913 + (TCTG)n Simple_repeat Simple_repeat 3 23 0 1 1356 219 305 26 96 chr15 101065161 101065351 -2429623 + L2c LINE L2 2896 3078 -341 1 1356 331 216 81 0 chr15 101065587 101065661 -2429313 + ID4_ SINE ID 2 81 -2 1 1356 1563 38 27 0 chr15 101066985 101067171 -2427803 + B2_Mm1a SINE B2 1 191 -2 1 1356 1305 50 17 0 chr15 101068079 101068258 -2426716 + B2_Mm2 SINE B2 14 195 0 1 1356 243 343 78 0 chr15 101068532 101068634 -2426340 + PB1 SINE Alu 1 110 -17 1 1356 478 219 0 20 chr15 101068676 101068774 -2426200 + PB1D10 SINE Alu 21 116 -1 1 1356 222 37 0 0 chr15 101069665 101069692 -2425282 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 1 1356 25 51 0 0 chr15 101070004 101070043 -2424931 + AT_rich Low_complexity Low_complexity 1 39 0 1 1356 274 242 0 0 chr15 101070048 101070110 -2424864 - RSINE1 SINE B4 -29 136 75 1 1356 242 274 0 0 chr15 101070256 101070307 -2424667 + MIRb SINE MIR 26 76 -192 1 1356 480 183 0 0 chr15 101070586 101070679 -2424295 + (TG)n Simple_repeat Simple_repeat 2 94 0 1 1356 275 307 0 0 chr15 101070732 101070807 -2424167 - B1F SINE Alu -4 145 71 1 1356 669 248 43 0 chr15 101070833 101070974 -2424000 - B1F2 SINE Alu 0 149 3 1 1356 573 15 0 0 chr15 101071023 101071089 -2423885 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 1356 253 231 0 84 chr15 101071091 101071162 -2423812 - B4A SINE B4 -16 276 212 1 1356 493 268 40 53 chr15 101072728 101072878 -2422096 + B1F SINE Alu 2 149 0 1 1356 304 282 13 3 chr15 101072879 101072970 -2422004 + ID4_ SINE ID 3 92 -60 1 1356 381 93 0 0 chr15 101073447 101073501 -2421473 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 1 1356 33 25 0 0 chr15 101073528 101073568 -2421406 + AT_rich Low_complexity Low_complexity 1 40 0 1 1356 234 210 0 31 chr15 101073568 101073590 -2421384 + (TATG)n Simple_repeat Simple_repeat 2 22 0 1 1356 315 0 0 0 chr15 101073590 101073625 -2421349 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1356 234 210 0 31 chr15 101073625 101073666 -2421308 + (TATG)n Simple_repeat Simple_repeat 2 41 0 1 1356 783 146 36 7 chr15 101073696 101073834 -2421140 - B1_Mur4 SINE Alu 0 150 9 1 1356 369 0 0 0 chr15 101073861 101073902 -2421072 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1356 1231 187 26 30 chr15 101073911 101074176 -2420798 + MTD LTR MaLR 2 265 -154 1 1356 1348 90 32 11 chr15 101074310 101074500 -2420474 - B2_Mm2 SINE B2 0 195 2 1 1356 212 296 155 9 chr15 101074698 101074814 -2420160 + MIRb SINE MIR 102 234 -34 1 1356 990 158 14 0 chr15 101074993 101075139 -2419835 + B1_Mur3 SINE Alu 2 149 0 1 1356 256 350 20 10 chr15 101075456 101075557 -2419417 - MER2 DNA MER2_type -32 313 212 1 1356 1158 82 0 0 chr15 101075588 101075734 -2419240 + B1_Mus2 SINE Alu 2 147 0 1 1356 450 298 0 9 chr15 101075741 101075846 -2419128 - PB1D10 SINE Alu -13 104 1 1 1356 330 362 40 0 chr15 101075852 101076004 -2418970 - MER2 DNA MER2_type -127 218 61 1 1356 209 0 0 88 chr15 101076234 101076268 -2418706 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1356 832 210 118 0 chr15 101076288 101076474 -2418500 - B3 SINE B2 -7 209 2 1 1356 321 136 311 22 chr15 101076479 101076569 -2418405 - PB1D10 SINE Alu 0 117 2 1 1356 21 0 0 0 chr15 101077578 101077599 -2417375 + AT_rich Low_complexity Low_complexity 1 21 0 1 1356 1353 73 84 0 chr15 101078116 101078135 -2416839 - B2_Mm2 SINE B2 -1 194 176 1 1356 201 39 0 0 chr15 101078135 101078161 -2416813 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1 1356 1353 73 84 0 chr15 101078161 101078319 -2416655 - B2_Mm2 SINE B2 -20 175 3 1 1356 246 341 68 61 chr15 101078805 101079017 -2415957 - MIRb SINE MIR -48 220 15 1 1356 2262 146 100 18 chr15 101079876 101080315 -2414659 + RMER15 LTR ERVL 1 475 -100 1 1356 592 145 5 1 chr15 101080323 101080425 -2414549 + B1_Mur4 SINE Alu 35 139 -10 1 1356 718 146 53 15 chr15 101080482 101080614 -2414360 + RMER15 LTR ERVL 439 575 0 1 1356 4790 255 58 22 chr15 101080614 101082089 -2412885 + RMER15-int LTR ERVL 1 1690 -3309 1 1356 2431 107 3 3 chr15 101082089 101082416 -2412558 - ORR1A2 LTR MaLR 0 327 1 1 1356 4790 259 37 26 chr15 101082416 101082779 -2412195 + RMER15-int LTR ERVL 1691 2038 -2961 1 1356 790 231 156 11 chr15 101082749 101083115 -2411859 + RMER15-int LTR ERVL 4539 4957 -42 1 1356 2701 155 50 27 chr15 101083125 101083649 -2411325 + RMER15 LTR ERVL 1 536 -39 1 1356 212 182 0 108 chr15 101083948 101084022 -2410952 - MIRc SINE MIR -133 135 70 1 1356 242 307 33 33 chr15 101084211 101084302 -2410672 + MIRc SINE MIR 48 138 -130 1 1356 264 228 0 32 chr15 101084601 101084696 -2410278 + G-rich Low_complexity Low_complexity 1 92 0 1 1356 1464 63 16 5 chr15 101085712 101085903 -2409071 - B2_Mm2 SINE B2 0 195 3 1 1356 475 133 208 30 chr15 101086125 101086226 -2408748 + PB1D9 SINE Alu 2 120 0 1 1356 271 307 0 13 chr15 101087264 101087340 -2407634 - ID_B1 SINE B4 -127 97 23 1 1356 279 204 0 18 chr15 101087286 101087341 -2407633 - ID2 SINE ID -9 74 21 1 1356 247 259 0 18 chr15 101087791 101087846 -2407128 - ID4_ SINE ID -11 72 19 1 1356 391 305 25 8 chr15 101087861 101087980 -2406994 - B1F SINE Alu -8 141 21 1 1356 367 228 0 20 chr15 101088048 101088140 -2406834 - PB1D9 SINE Alu -27 123 39 1 1356 1659 31 0 0 chr15 101089743 101089934 -2405040 - B2_Mm1a SINE B2 0 193 3 1 1356 577 173 121 179 chr15 101089947 101090052 -2404922 - URR1B DNA MER1_type -7 218 106 1 1356 1255 41 0 0 chr15 101090052 101090198 -2404776 + B1_Mus2 SINE Alu 2 147 0 1 1356 577 173 121 179 chr15 101090198 101090282 -2404692 - URR1B DNA MER1_type -120 105 40 1 1356 249 81 0 0 chr15 101090316 101090353 -2404621 - URR1B DNA MER1_type -188 37 1 1 1356 225 0 0 0 chr15 101091302 101091327 -2403647 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1356 206 205 0 0 chr15 101091404 101091443 -2403531 + G-rich Low_complexity Low_complexity 4 42 0 1 1356 312 273 121 0 chr15 101093484 101093583 -2401391 - B1F1 SINE Alu -31 118 8 1 1356 1311 127 9 18 chr15 101093754 101093971 -2401003 - URR1B DNA MER1_type -10 215 1 1 1356 359 195 49 49 chr15 101095775 101095856 -2399118 - ID4_ SINE ID -1 82 2 1 1356 373 294 82 21 chr15 101096287 101096457 -2398517 + MIR3 SINE MIR 32 199 -9 1 1356 511 156 517 28 chr15 101099284 101099429 -2395545 + B3 SINE B2 1 216 0 1 1356 887 238 20 20 chr15 101099568 101099765 -2395209 - B3A SINE B2 -1 197 1 1 1356 220 289 0 0 chr15 101100748 101100824 -2394150 + CT-rich Low_complexity Low_complexity 1 76 0 1 1356 340 311 79 32 chr15 101105172 101105290 -2389684 - L1MEf LINE L1 -4061 2572 2448 1 1356 1267 27 7 0 chr15 101105290 101105436 -2389538 - B1_Mm SINE Alu 0 147 1 1 1356 337 305 98 14 chr15 101105436 101105460 -2389514 - L1MEf LINE L1 -4189 2444 2419 1 1356 355 301 47 39 chr15 101105606 101105734 -2389240 - B1F2 SINE Alu -2 147 19 1 1356 312 330 37 0 chr15 101105636 101105745 -2389229 - ID_B1 SINE B4 -24 200 88 1 1356 795 169 0 0 chr15 101105954 101106084 -2388890 + B1_Mus2 SINE Alu 13 142 -5 1 1356 477 313 100 0 chr15 101106108 101106258 -2388716 - RSINE1 SINE B4 0 165 1 1 1356 342 0 0 0 chr15 101107375 101107413 -2387561 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1356 342 0 0 0 chr15 101107413 101107450 -2387524 + (GA)n Simple_repeat Simple_repeat 1 38 0 1 1356 382 218 28 47 chr15 101107566 101107672 -2387302 - PB1D10 SINE Alu 0 117 14 1 1356 415 259 63 49 chr15 101110732 101110874 -2384100 - ID_B1 SINE B4 0 224 81 1 1356 464 238 243 6 chr15 101111009 101111182 -2383792 - B3 SINE B2 0 216 3 2 1356 216 0 0 0 chr15 101111357 101111381 -2383593 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1356 216 0 0 0 chr15 101111413 101111437 -2383537 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2 1356 1235 29 0 0 chr15 101111437 101111576 -2383398 - B1_Mus2 SINE Alu -8 139 1 2 1356 994 174 94 35 chr15 101111624 101111827 -2383147 - B3 SINE B2 0 216 2 2 1356 1241 48 0 0 chr15 101111842 101111987 -2382987 - B1_Mus1 SINE Alu -2 146 2 2 1356 238 184 88 0 chr15 101111995 101112065 -2382909 - B1F SINE Alu -2 145 72 2 1356 189 0 0 0 chr15 101112167 101112188 -2382786 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2 1356 318 148 0 0 chr15 101112502 101112556 -2382418 + (CAA)n Simple_repeat Simple_repeat 1 54 0 2 1356 426 287 106 52 chr15 101112630 101112998 -2381976 - MLT2B4 LTR ERVL -19 548 78 2 1356 327 250 0 14 chr15 101113250 101113319 -2381655 + ID4 SINE ID 2 69 -14 2 1356 275 261 42 42 chr15 101115459 101115555 -2379419 + PB1 SINE Alu 30 125 -2 2 1356 306 216 80 13 chr15 101115945 101116020 -2378954 - ID4 SINE ID 0 83 4 2 1356 859 179 0 20 chr15 101116238 101116386 -2378588 + B1_Mus1 SINE Alu 4 148 0 2 1356 638 190 14 0 chr15 101116526 101116658 -2378316 - B1_Mur2 SINE Alu -7 142 1 2 1356 337 178 109 12 chr15 101118660 101118756 -2376218 + B1_Mur2 SINE Alu 41 144 -5 2 1356 716 174 148 6 chr15 101118988 101119185 -2375789 - ORR1D1-int LTR MaLR -128 1452 1068 2 1356 1776 180 79 37 chr15 101119273 101119677 -2375297 - ORR1D1-int LTR MaLR -949 421 1 2 1356 1151 201 84 84 chr15 101119681 101119980 -2374994 - ORR1D1 LTR MaLR -8 366 68 2 1356 341 188 114 34 chr15 101122296 101122384 -2372590 - B1_Mm SINE Alu 0 147 53 2 1356 323 311 112 53 chr15 101122414 101122584 -2372390 - ID_B1 SINE B4 -44 180 1 2 1356 227 304 11 18 chr15 101123103 101123137 -2371837 + ID_B1 SINE B4 50 136 -153 2 1356 334 164 0 0 chr15 101123137 101123192 -2371782 + B1_Mus1 SINE Alu 1 55 -93 2 1356 778 38 0 19 chr15 101123242 101123349 -2371625 + B1_Mus2 SINE Alu 42 146 -1 2 1356 342 91 0 0 chr15 101125147 101125202 -2369772 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 1356 341 287 53 99 chr15 101126842 101126870 -2368104 - ID_B1 SINE B4 0 224 201 2 1356 1287 138 26 0 chr15 101126870 101127059 -2367915 + B2_Mm2 SINE B2 1 194 -1 2 1356 452 242 45 61 chr15 101127059 101127162 -2367812 - B1F SINE Alu -26 123 20 2 1356 341 287 53 99 chr15 101127162 101127181 -2367793 - ID_B1 SINE B4 -24 200 81 2 1356 404 277 78 37 chr15 101127229 101127473 -2367501 + RMER12 LTR ERVK 735 988 -334 2 1356 816 176 0 0 chr15 101127473 101127643 -2367331 + (TG)n Simple_repeat Simple_repeat 2 171 0 2 1356 1364 211 72 47 chr15 101127809 101128168 -2366806 - ORR1D2 LTR MaLR -2 368 1 2 1356 1713 171 50 20 chr15 101128210 101128303 -2366671 + ORR1D1 LTR MaLR 7 104 -270 2 1356 429 20 0 0 chr15 101128303 101128353 -2366621 + (GGA)n Simple_repeat Simple_repeat 1 50 0 2 1356 1713 171 50 20 chr15 101128353 101128616 -2366358 + ORR1D1 LTR MaLR 105 372 -2 2 1356 198 143 0 0 chr15 101128634 101128669 -2366305 + (GGGGA)n Simple_repeat Simple_repeat 3 37 0 2 1356 243 169 0 0 chr15 101129019 101129090 -2365884 + G-rich Low_complexity Low_complexity 85 155 0 2 1356 1489 74 16 0 chr15 101129380 101129570 -2365404 - B2_Mm2 SINE B2 -2 193 1 2 1356 1287 108 37 11 chr15 101129572 101129759 -2365215 - B2_Mm2 SINE B2 0 195 4 2 1356 263 309 93 22 chr15 101129761 101129900 -2365074 - MLT1K LTR MaLR -62 533 385 2 1356 365 215 176 0 chr15 101130798 101130919 -2364055 - B1_Mm SINE Alu 0 149 7 2 1356 471 321 19 0 chr15 101131042 101131201 -2363773 - B4A SINE B4 -7 285 124 2 1356 369 0 0 0 chr15 101131225 101131266 -2363708 + (CAT)n Simple_repeat Simple_repeat 2 42 0 2 1356 643 267 0 0 chr15 101131266 101131401 -2363573 - B1_Mur1 SINE Alu -10 139 5 2 1356 323 292 24 0 chr15 101131502 101131670 -2363304 + (TG)n Simple_repeat Simple_repeat 1 172 0 2 1356 574 273 7 0 chr15 101131676 101131815 -2363159 - RSINE1 SINE B4 0 165 26 2 1356 392 241 0 11 chr15 101131809 101131897 -2363077 - B4A SINE B4 -205 87 1 2 1356 800 253 6 30 chr15 101132182 101132349 -2362625 - RSINE1 SINE B4 0 165 3 2 1356 960 129 14 0 chr15 101133119 101133266 -2361708 + B1_Mur3 SINE Alu 1 149 0 2 1356 2006 144 25 113 chr15 101133318 101133563 -2361411 - ORR1D1 LTR MaLR 0 374 166 2 1356 1191 68 6 22 chr15 101133563 101133744 -2361230 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 2 1356 2006 144 25 113 chr15 101133744 101133906 -2361068 - ORR1D1 LTR MaLR -209 165 3 2 1356 477 299 83 5 chr15 101134355 101134560 -2360414 - L2b LINE L2 -214 3161 2941 2 1356 429 62 31 0 chr15 101134824 101134888 -2360086 - MTB LTR MaLR 0 400 335 2 1356 1594 198 137 56 chr15 101134888 101134922 -2360052 - RLTR31A_Mm LTR ERVK 0 561 521 2 1356 1189 62 7 0 chr15 101134922 101135067 -2359907 + B1_Mus1 SINE Alu 3 148 0 2 1356 2146 149 44 40 chr15 101135067 101135551 -2359423 - RLTR31A_Mm LTR ERVK -41 520 1 2 1356 2361 86 9 0 chr15 101135551 101135888 -2359086 - MTB LTR MaLR -60 340 1 2 1356 2940 57 0 24 chr15 101135943 101136322 -2358652 - L1Md_F3 LINE L1 0 6584 6215 2 1356 996 185 43 24 chr15 101136331 101136541 -2358433 - B3 SINE B2 -2 214 1 2 1356 268 372 114 54 chr15 101136711 101137063 -2357911 + L2b LINE L2 3003 3375 0 2 1356 333 0 0 0 chr15 101137567 101137604 -2357370 + (TC)n Simple_repeat Simple_repeat 2 38 0 2 1356 447 19 0 0 chr15 101137604 101137655 -2357319 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 1356 954 131 125 0 chr15 101137690 101137850 -2357124 + B2_Mm2 SINE B2 1 180 -15 2 1356 814 88 8 8 chr15 101137851 101137977 -2356997 + (GAA)n Simple_repeat Simple_repeat 2 127 0 2 1356 214 245 20 0 chr15 101137979 101138028 -2356946 - B1F2 SINE Alu -92 57 8 2 1356 867 222 50 40 chr15 101138641 101138843 -2356131 - B3 SINE B2 -12 204 1 2 1356 495 193 92 0 chr15 101139734 101139843 -2355131 + B2_Mm2 SINE B2 1 119 -76 2 1356 336 253 21 21 chr15 101140049 101140146 -2354828 - PB1D10 SINE Alu -3 114 18 2 1356 428 184 0 22 chr15 101140204 101140293 -2354681 + PB1 SINE Alu 41 127 0 2 1356 399 328 0 16 chr15 101140292 101140419 -2354555 + ID_B1 SINE B4 82 206 -18 2 1356 528 179 0 82 chr15 101140438 101140560 -2354414 + B3A SINE B2 1 112 -86 2 1356 346 289 47 19 chr15 101140558 101140664 -2354310 - B1_Mur1 SINE Alu -35 114 6 2 1356 1120 118 17 0 chr15 101140734 101140912 -2354062 - B2_Mm2 SINE B2 0 195 15 2 1356 1204 74 0 0 chr15 101140926 101141074 -2353900 - B1_Mus1 SINE Alu 0 148 1 2 1356 22 0 0 0 chr15 101141081 101141103 -2353871 + AT_rich Low_complexity Low_complexity 1 22 0 2 1356 339 25 0 0 chr15 101141137 101141177 -2353797 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 2 1356 453 242 83 8 chr15 101141259 101141392 -2353582 - ID_B1 SINE B4 -1 223 81 2 1356 315 49 0 0 chr15 101141834 101141875 -2353099 + (C)n Simple_repeat Simple_repeat 1 41 0 2 1356 576 167 0 0 chr15 101142186 101142282 -2352692 - ID_B1 SINE B4 -11 213 118 2 1356 231 303 119 0 chr15 101142187 101142296 -2352678 - B1_Mus1 SINE Alu -12 136 15 2 1356 592 272 5 61 chr15 101142307 101142419 -2352555 + MT2A LTR ERVL 8 108 -425 2 1356 1903 191 65 5 chr15 101142419 101142803 -2352171 - MTD LTR MaLR 0 419 13 2 1356 1378 229 92 16 chr15 101142819 101143188 -2351786 + MT2A LTR ERVL 137 533 0 2 1356 491 61 256 0 chr15 101143570 101143652 -2351322 + B1_Mus1 SINE Alu 40 142 -6 2 1356 281 238 140 19 chr15 101143571 101143654 -2351320 + B4 SINE B4 125 221 -71 2 1356 378 0 0 0 chr15 101143654 101143696 -2351278 + (GA)n Simple_repeat Simple_repeat 1 42 0 2 1356 281 238 140 19 chr15 101143696 101143719 -2351255 + B4 SINE B4 222 244 -48 2 1356 832 116 35 35 chr15 101143828 101143971 -2351003 - B1_Mus2 SINE Alu -4 143 1 2 1356 302 234 0 49 chr15 101144050 101144131 -2350843 + MLT1A1 LTR MaLR 331 407 -1 2 1356 2465 72 15 42 chr15 101144676 101144779 -2350195 + ORR1A2 LTR MaLR 5 96 -231 2 1356 1160 65 0 0 chr15 101144779 101144918 -2350056 + B1_Mus1 SINE Alu 2 140 -8 2 1356 360 59 0 0 chr15 101144918 101144969 -2350005 + (CCAA)n Simple_repeat Simple_repeat 2 52 0 2 1356 2465 72 15 42 chr15 101144969 101145196 -2349778 + ORR1A2 LTR MaLR 97 326 -1 2 1356 452 198 43 78 chr15 101145226 101145341 -2349633 - B3 SINE B2 -102 114 4 2 1356 1183 185 19 57 chr15 101145654 101145918 -2349056 - MTC LTR MaLR -54 367 114 2 1356 26 64 0 0 chr15 101146703 101146750 -2348224 + AT_rich Low_complexity Low_complexity 1 47 0 2 1356 279 0 0 0 chr15 101146751 101146782 -2348192 + (TC)n Simple_repeat Simple_repeat 1 31 0 2 1356 440 282 36 51 chr15 101146784 101146922 -2348052 - RSINE1 SINE B4 -16 149 14 2 1356 265 148 113 16 chr15 101146928 101146990 -2347984 - PB1D9 SINE Alu -15 105 38 2 1356 499 254 165 25 chr15 101147290 101147411 -2347563 + MTB_Mm LTR MaLR 1 151 -256 2 1356 1509 201 104 23 chr15 101147411 101147757 -2347217 - ORR1D1 LTR MaLR 0 374 1 2 1356 499 254 165 25 chr15 101147757 101147877 -2347097 + MTB_Mm LTR MaLR 152 276 -131 2 1356 246 279 15 0 chr15 101148332 101148400 -2346574 - MLT1J LTR MaLR -335 177 109 2 1356 1517 58 21 0 chr15 101148471 101148662 -2346312 + B2_Mm2 SINE B2 1 195 0 2 1356 282 281 11 63 chr15 101149129 101149224 -2345750 + B4A SINE B4 86 175 -117 2 1356 348 244 0 37 chr15 101150045 101150126 -2344848 + ID4_ SINE ID 3 80 -3 2 1356 992 130 0 0 chr15 101150473 101150611 -2344363 + B1_Mur4 SINE Alu 5 142 -8 2 1356 218 380 49 37 chr15 101151228 101151392 -2343582 + L4 LINE RTE 1584 1749 -280 2 1356 235 296 256 36 chr15 101151814 101151951 -2343023 + MIR SINE MIR 60 226 -36 2 1356 230 294 0 0 chr15 101151993 101152044 -2342930 + polypurine Low_complexity Low_complexity 3 53 0 3 1356 342 115 0 0 chr15 101152061 101152113 -2342861 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1356 1127 149 71 6 chr15 101152205 101152387 -2342587 - B2_Mm2 SINE B2 0 195 2 3 1356 262 281 125 44 chr15 101153346 101153506 -2341468 + MLT1F1 LTR MaLR 166 338 -231 3 1356 441 260 95 14 chr15 101153517 101153665 -2341309 + MLT1F1 LTR MaLR 402 561 -8 3 1356 489 34 0 0 chr15 101153778 101153837 -2341137 + (TTTA)n Simple_repeat Simple_repeat 4 62 0 3 1356 633 183 17 0 chr15 101153848 101153968 -2341006 - B1F2 SINE Alu 0 149 28 3 1356 487 237 192 18 chr15 101154077 101154273 -2340701 + B3A SINE B2 1 216 0 3 1356 390 244 0 0 chr15 101154301 101154379 -2340595 + PB1D10 SINE Alu 10 87 -30 3 1356 985 58 26 7 chr15 101154383 101154538 -2340436 + (TCTA)n Simple_repeat Simple_repeat 1 158 0 3 1356 1058 69 31 4 chr15 101154568 101154829 -2340145 + (TCTA)n Simple_repeat Simple_repeat 1 268 0 3 1356 1247 52 23 0 chr15 101154865 101155213 -2339761 + (TCTA)n Simple_repeat Simple_repeat 1 356 0 3 1356 505 310 6 42 chr15 101155249 101155414 -2339560 + RSINE1 SINE B4 6 164 -1 3 1356 29 0 0 0 chr15 101155494 101155523 -2339451 + AT_rich Low_complexity Low_complexity 1 29 0 3 1356 279 305 81 24 chr15 101155569 101155731 -2339243 + ERVL-B4-int LTR ERVL 2288 2499 -3258 3 1356 21 0 0 0 chr15 101155819 101155840 -2339134 + GC_rich Low_complexity Low_complexity 1 21 0 3 1356 1476 211 66 44 chr15 101155873 101156038 -2338936 + ORR1D1 LTR MaLR 1 167 -207 3 1356 302 0 26 0 chr15 101156038 101156076 -2338898 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 3 1356 1476 211 66 44 chr15 101156076 101156276 -2338698 + ORR1D1 LTR MaLR 168 373 -1 3 1356 248 239 63 32 chr15 101156408 101156503 -2338471 - ID_B1 SINE B4 -9 215 118 3 1356 435 251 152 34 chr15 101156933 101157110 -2337864 - MLT1D LTR MaLR -6 499 302 3 1356 378 0 0 0 chr15 101158033 101158075 -2336899 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1356 396 0 0 0 chr15 101159177 101159221 -2335753 + (AACTG)n Simple_repeat Simple_repeat 1 44 0 3 1356 393 22 0 0 chr15 101159440 101159486 -2335488 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1356 200 35 35 0 chr15 101161531 101161560 -2333414 + (TGG)n Simple_repeat Simple_repeat 2 31 0 3 1356 1110 161 129 10 chr15 101164246 101164447 -2330527 - URR1B DNA MER1_type 0 225 1 3 1356 645 14 0 0 chr15 101165271 101165345 -2329629 + (GA)n Simple_repeat Simple_repeat 1 74 0 3 1356 957 250 36 0 chr15 101165671 101165863 -2329111 - B3 SINE B2 -17 199 1 3 1356 1470 72 0 0 chr15 101165878 101166058 -2328916 - B2_Mm2 SINE B2 -14 181 2 3 1356 239 183 0 32 chr15 101166251 101166313 -2328661 + G-rich Low_complexity Low_complexity 2 61 0 3 1356 267 31 0 0 chr15 101166359 101166391 -2328583 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1356 198 118 0 0 chr15 101167056 101167090 -2327884 + (TCCCG)n Simple_repeat Simple_repeat 4 37 0 3 1356 203 265 0 0 chr15 101167781 101167830 -2327144 - MIR SINE MIR -97 165 117 3 1356 407 258 92 13 chr15 101169234 101169387 -2325587 - MIRb SINE MIR -61 207 43 3 1356 343 38 19 19 chr15 101170245 101170299 -2324675 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1356 559 201 0 11 chr15 101170299 101170362 -2324612 + polypurine Low_complexity Low_complexity 2 64 0 3 1356 387 60 0 0 chr15 101170362 101170412 -2324562 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1356 559 201 0 11 chr15 101170412 101170497 -2324477 + polypurine Low_complexity Low_complexity 65 147 0 3 1356 371 73 18 0 chr15 101170497 101170552 -2324422 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1356 559 201 0 11 chr15 101170552 101170583 -2324391 + polypurine Low_complexity Low_complexity 148 178 0 3 1356 229 330 136 83 chr15 101170633 101170861 -2324113 - LTR84b LTR ERVL -348 413 174 3 1356 754 181 60 0 chr15 101171261 101171394 -2323580 - B1_Mur1 SINE Alu -6 143 3 3 1356 1783 293 4 53 chr15 101171394 101171930 -2323044 - Lx8 LINE L1 -320 7153 6645 3 1356 220 254 0 33 chr15 101172666 101172727 -2322247 - MIRb SINE MIR -17 251 193 3 1356 799 175 103 93 chr15 101172736 101172950 -2322024 - B3 SINE B2 0 216 1 3 1356 1128 120 72 3 chr15 101174432 101174658 -2320316 - Lx3B LINE L1 -240 6769 6502 3 1356 276 243 14 0 chr15 101174644 101174714 -2320260 - L1_Mur1 LINE L1 -6219 763 693 3 1356 1420 60 16 42 chr15 101175397 101175589 -2319385 + B2_Mm2 SINE B2 2 188 -7 3 1356 3124 40 13 0 chr15 101176452 101176829 -2318145 - L1Md_F2 LINE L1 -2 6580 6199 3 1356 183 125 34 51 chr15 101176940 101176974 -2318000 + (TCTA)n Simple_repeat Simple_repeat 4 37 0 3 1356 279 0 0 0 chr15 101176974 101177005 -2317969 + (TATG)n Simple_repeat Simple_repeat 1 31 0 3 1356 939 82 40 6 chr15 101177005 101177199 -2317775 + (TCTA)n Simple_repeat Simple_repeat 1 200 0 3 1356 1103 17 11 68 chr15 101177234 101177425 -2317549 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 3 1356 446 81 0 13 chr15 101177427 101177445 -2317529 + (TATG)n Simple_repeat Simple_repeat 3 19 0 3 1356 408 89 38 0 chr15 101177445 101177524 -2317450 + (TCTA)n Simple_repeat Simple_repeat 1 82 0 3 1356 446 81 0 13 chr15 101177524 101177580 -2317394 + (TATG)n Simple_repeat Simple_repeat 3 58 0 3 1356 593 77 58 29 chr15 101177567 101177740 -2317234 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 3 1356 860 68 43 0 chr15 101177775 101177938 -2317036 + (TCTA)n Simple_repeat Simple_repeat 1 170 0 3 1356 399 21 0 0 chr15 101177938 101177986 -2316988 + (TATG)n Simple_repeat Simple_repeat 2 49 0 3 1356 427 271 0 53 chr15 101178069 101178182 -2316792 - RSINE1 SINE B4 -56 109 3 3 1356 490 237 50 58 chr15 101178560 101178699 -2316275 + ID_B1 SINE B4 87 224 0 3 1356 360 0 0 0 chr15 101181088 101181128 -2313846 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1356 312 250 212 9 chr15 101181130 101181243 -2313731 - RSINE1 SINE B4 -26 139 4 3 1356 201 300 65 65 chr15 101185057 101185164 -2309810 + MIRm SINE MIR 45 151 -125 3 1356 380 276 120 73 chr15 101185261 101185535 -2309439 + B4 SINE B4 2 288 -4 3 1356 405 295 0 0 chr15 101185539 101185778 -2309196 + (CA)n Simple_repeat Simple_repeat 1 239 0 3 1356 187 314 127 16 chr15 101185797 101185839 -2309135 - MIR SINE MIR -106 162 111 3 1356 321 26 0 0 chr15 101185839 101185877 -2309097 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 1356 187 314 127 16 chr15 101185877 101185960 -2309014 - MIR SINE MIR -151 117 24 3 1356 200 391 0 0 chr15 101185975 101186067 -2308907 + MIRb SINE MIR 169 260 -8 3 1356 280 319 12 35 chr15 101186563 101186691 -2308283 + MER33 DNA MER1_type 1 124 -2500 3 1356 313 239 85 21 chr15 101186680 101186774 -2308200 - B1F2 SINE Alu -24 125 26 3 1356 323 301 28 83 chr15 101186779 101186960 -2308014 + Charlie5 DNA MER1_type 2404 2574 -50 3 1356 546 299 107 37 chr15 101187267 101187482 -2307492 + MER2 DNA MER2_type 74 303 -42 3 169 638 182 0 81 chr15 101187509 101187655 -2307319 + ORR1C1 LTR MaLR 1 131 -247 3 1357 454 211 11 0 chr15 101187657 101187752 -2307222 + ORR1C1 LTR MaLR 263 358 -26 3 1357 274 333 24 32 chr15 101187752 101187876 -2307098 - MIR SINE MIR -108 154 32 3 1357 540 127 0 0 chr15 101188573 101188683 -2306291 + (GA)n Simple_repeat Simple_repeat 1 110 0 3 1357 270 0 0 0 chr15 101189401 101189431 -2305543 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1357 499 290 64 14 chr15 101190090 101190230 -2304744 + B1F2 SINE Alu 3 149 0 3 1357 513 0 0 0 chr15 101192295 101192352 -2302622 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1357 21 0 0 0 chr15 101193624 101193645 -2301329 + GC_rich Low_complexity Low_complexity 1 21 0 3 1357 186 319 14 27 chr15 101194058 101194132 -2300842 + L2c LINE L2 3256 3328 -59 3 1357 224 304 14 14 chr15 101195300 101195370 -2299604 + MIRb SINE MIR 117 186 -82 3 1357 313 329 73 23 chr15 101195430 101195607 -2299367 - MIR SINE MIR -29 233 48 3 1357 597 268 95 6 chr15 101195628 101195797 -2299177 - ID_B1 SINE B4 -39 185 2 3 1357 182 271 83 17 chr15 101196066 101196126 -2298848 + L4 LINE RTE 1428 1491 -538 3 1357 495 0 0 0 chr15 101196638 101196693 -2298281 + (TC)n Simple_repeat Simple_repeat 1 55 0 3 1357 246 170 0 0 chr15 101197851 101197898 -2297076 - MIR SINE MIR -135 127 81 3 1357 345 309 22 0 chr15 101198290 101198398 -2296576 - MIRm SINE MIR -125 151 34 3 1357 465 19 0 0 chr15 101198906 101198960 -2296014 + (TCTG)n Simple_repeat Simple_repeat 3 56 0 3 1357 343 339 18 0 chr15 101198991 101199103 -2295871 + MIRb SINE MIR 46 159 -109 3 1357 210 71 0 0 chr15 101201353 101201381 -2293593 + (C)n Simple_repeat Simple_repeat 1 28 0 3 1357 205 314 49 33 chr15 101204172 101204294 -2290680 + MIRc SINE MIR 3 126 -142 3 1357 241 349 45 23 chr15 101204531 101204663 -2290311 + L2b LINE L2 3219 3353 -22 3 1357 680 202 100 8 chr15 101205051 101205181 -2289793 + B1_Mur1 SINE Alu 2 143 -6 3 1357 180 0 0 0 chr15 101205192 101205212 -2289762 + (GAAAA)n Simple_repeat Simple_repeat 5 24 0 3 1357 410 260 7 136 chr15 101208022 101208169 -2286805 + MLT1D LTR MaLR 370 497 -8 3 1357 306 0 0 0 chr15 101208539 101208573 -2286401 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1357 722 278 71 75 chr15 101211030 101211310 -2283664 - B4A SINE B4 -6 286 8 3 1357 294 335 97 19 chr15 101211548 101211703 -2283271 - MIRc SINE MIR -101 167 1 3 1357 181 295 12 60 chr15 101213761 101213844 -2281130 - L2a LINE L2 -83 3343 3265 3 1357 232 364 42 0 chr15 101214665 101214783 -2280191 - MIR3 SINE MIR -15 193 71 3 1357 446 248 10 0 chr15 101215021 101215143 -2279831 + MIRc SINE MIR 24 149 -119 3 1357 321 26 0 0 chr15 101215892 101215930 -2279044 + (GA)n Simple_repeat Simple_repeat 2 39 0 3 1357 256 309 8 38 chr15 101217505 101217636 -2277338 + CT-rich Low_complexity Low_complexity 3 129 0 3 1357 186 43 0 0 chr15 101218422 101218445 -2276529 + (CCCA)n Simple_repeat Simple_repeat 3 25 0 3 1357 369 205 205 0 chr15 101219673 101219790 -2275184 + B1F SINE Alu 2 142 -7 3 1357 513 268 18 0 chr15 101220191 101220303 -2274671 - PB1D10 SINE Alu -1 116 3 3 1357 501 337 68 34 chr15 101220967 101221231 -2273743 - L1MC4 LINE L1 -156 7886 7614 4 1357 448 128 0 41 chr15 101221235 101221333 -2273641 + C-rich Low_complexity Low_complexity 4 97 0 4 1357 182 150 25 0 chr15 101221427 101221467 -2273507 + CT-rich Low_complexity Low_complexity 3 43 0 4 1357 328 186 171 0 chr15 101221469 101221539 -2273435 - ID4 SINE ID 0 83 2 4 1357 1212 296 141 9 chr15 101221623 101222260 -2272714 - L1MC4 LINE L1 -503 7539 6819 4 1357 1800 222 47 2 chr15 101222282 101222678 -2272296 - MTD LTR MaLR -14 405 1 4 1357 1100 83 13 0 chr15 101223485 101223641 -2271333 - ORR1B1 LTR MaLR 0 394 237 4 1357 279 333 102 0 chr15 101223699 101223807 -2271167 - MER21B LTR ERV1 -291 572 454 4 1357 267 221 43 14 chr15 101224178 101224247 -2270727 - MER21B LTR ERV1 -775 88 18 4 1357 254 284 126 18 chr15 101224388 101224499 -2270475 - MIRb SINE MIR -24 244 122 4 1357 376 287 28 0 chr15 101225281 101225389 -2269585 - PB1D7 SINE Alu 0 120 10 4 1357 234 286 39 85 chr15 101225338 101225468 -2269506 - B4A SINE B4 -147 145 22 4 1357 274 382 0 0 chr15 101225887 101225989 -2268985 - PB1D10 SINE Alu -2 115 14 4 1357 186 279 82 0 chr15 101226237 101226298 -2268676 - MIRm SINE MIR 0 276 211 4 1357 1037 338 97 32 chr15 101226460 101227017 -2267957 + Tigger9b DNA MER2_type 26 618 -6 4 1357 324 311 115 101 chr15 101227579 101228215 -2266759 + L1ME1 LINE L1 4744 5388 -758 4 1357 303 281 50 40 chr15 101228373 101228473 -2266501 - B1F1 SINE Alu -38 111 11 4 1357 384 59 0 0 chr15 101228488 101228539 -2266435 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1357 668 316 104 21 chr15 101228541 101228607 -2266367 + L1ME1 LINE L1 5600 5666 -513 4 1357 3130 143 214 2 chr15 101228607 101229215 -2265759 - RMER19A LTR ERVK 0 737 1 4 1357 668 316 104 21 chr15 101229215 101229675 -2265299 + L1ME1 LINE L1 5667 6170 -9 4 1357 346 367 67 4 chr15 101229691 101229959 -2265015 + HAL1 LINE L1 342 626 -1881 4 1357 592 249 51 92 chr15 101230408 101230625 -2264349 - B4 SINE B4 0 292 85 4 1357 339 262 78 54 chr15 101230759 101231017 -2263957 + RMER17C LTR ERVK 133 396 -14 4 1357 232 337 0 30 chr15 101230991 101231092 -2263882 - B4 SINE B4 -192 100 3 4 1357 546 288 14 0 chr15 101231993 101232139 -2262835 + ID_B1 SINE B4 76 223 -1 4 1357 41 21 0 0 chr15 101232164 101232212 -2262762 + AT_rich Low_complexity Low_complexity 1 48 0 4 1357 447 264 36 0 chr15 101232879 101233007 -2261967 - B1_Mur1 SINE Alu -8 141 3 4 1357 200 79 53 0 chr15 101233023 101233061 -2261913 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 4 1357 488 240 0 22 chr15 101233092 101233275 -2261699 + CT-rich Low_complexity Low_complexity 2 180 0 4 1357 1219 151 32 9 chr15 101233708 101233928 -2261046 - URR1B DNA MER1_type 0 225 1 4 1357 842 255 106 51 chr15 101233980 101234236 -2260738 - B4A SINE B4 -22 270 1 4 1357 180 344 94 0 chr15 101235084 101235180 -2259794 - MIR SINE MIR -89 173 69 4 1357 602 211 45 8 chr15 101236088 101236222 -2258752 + RSINE1 SINE B4 2 140 -25 4 1357 753 124 5 53 chr15 101236723 101236911 -2258063 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 1357 186 227 0 0 chr15 101236918 101236962 -2258012 + C-rich Low_complexity Low_complexity 4 47 0 4 1357 348 74 0 0 chr15 101237087 101237141 -2257833 + ORR1A4 LTR MaLR 1 54 -275 4 1357 1661 222 25 40 chr15 101237421 101237825 -2257149 - MTD LTR MaLR -14 405 8 4 1357 297 0 0 0 chr15 101237964 101237997 -2256977 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 1357 854 224 25 15 chr15 101238097 101238301 -2256673 + B3 SINE B2 1 206 -10 4 1357 1162 176 194 7 chr15 101238371 101238680 -2256294 + ORR1D2 LTR MaLR 1 367 -3 4 1357 806 226 17 82 chr15 101238893 101239124 -2255850 - B3 SINE B2 0 216 1 4 1357 328 260 28 19 chr15 101239282 101239388 -2255586 - PB1D10 SINE Alu -9 108 2 4 1357 22 70 0 0 chr15 101239471 101239514 -2255460 + AT_rich Low_complexity Low_complexity 1 43 0 4 1357 686 191 31 0 chr15 101239514 101239780 -2255194 + (TATATG)n Simple_repeat Simple_repeat 1 274 0 4 1357 487 250 125 45 chr15 101239780 101239956 -2255018 - B3A SINE B2 -2 196 7 4 1357 350 302 22 95 chr15 101240019 101240126 -2254848 + MIR SINE MIR 43 151 -111 4 1357 343 336 0 0 chr15 101240126 101240233 -2254741 + PB1D10 SINE Alu 3 109 -8 4 1357 350 302 22 95 chr15 101240233 101240304 -2254670 + MIR SINE MIR 152 208 -54 4 1357 246 243 12 86 chr15 101240469 101240550 -2254424 - ID4_ SINE ID -2 81 7 4 1357 415 167 18 0 chr15 101240896 101241010 -2253964 + (TG)n Simple_repeat Simple_repeat 2 117 0 4 1357 318 67 0 0 chr15 101241125 101241170 -2253804 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 1357 188 188 0 0 chr15 101241185 101241217 -2253757 + L2c LINE L2 3278 3309 -78 4 1357 351 0 0 0 chr15 101241278 101241317 -2253657 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1357 225 352 37 37 chr15 101244936 101245098 -2249876 - MIR3 SINE MIR -14 194 33 4 1357 297 0 0 0 chr15 101246298 101246331 -2248643 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1357 333 0 0 0 chr15 101246331 101246367 -2248607 + (GA)n Simple_repeat Simple_repeat 1 37 0 4 1357 668 189 0 5 chr15 101246887 101247108 -2247866 + (TG)n Simple_repeat Simple_repeat 1 219 0 4 1357 291 196 0 0 chr15 101247517 101247568 -2247406 + MTEa LTR MaLR 1 51 -328 4 1357 570 248 8 0 chr15 101247568 101247697 -2247277 + B1F1 SINE Alu 1 130 -19 4 1357 364 319 25 33 chr15 101247741 101247861 -2247113 + MTEa LTR MaLR 65 183 -196 4 1357 387 202 0 0 chr15 101247904 101248028 -2246946 + GA-rich Low_complexity Low_complexity 1 124 0 4 1357 426 20 0 0 chr15 101248052 101248103 -2246871 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1357 441 0 0 0 chr15 101248103 101248151 -2246823 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 1357 199 146 18 18 chr15 101249139 101249195 -2245779 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 4 1357 483 287 37 0 chr15 101249394 101249530 -2245444 - B1F SINE Alu -8 141 1 4 1357 299 331 37 24 chr15 101250380 101250544 -2244430 - MIR SINE MIR -69 193 28 4 1357 230 343 42 21 chr15 101252528 101252671 -2242303 - ORR1E LTR MaLR -210 149 4 4 1357 23 54 0 0 chr15 101252807 101252844 -2242130 + AT_rich Low_complexity Low_complexity 1 37 0 4 1357 22 0 0 0 chr15 101253122 101253144 -2241830 + AT_rich Low_complexity Low_complexity 1 22 0 4 1357 468 244 90 42 chr15 101253153 101253198 -2241776 - B2_Mm2 SINE B2 -18 177 136 4 1357 390 42 0 0 chr15 101253198 101253246 -2241728 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1357 561 216 15 3 chr15 101253246 101253367 -2241607 - B3 SINE B2 -60 135 3 4 1357 394 333 101 22 chr15 101253370 101253548 -2241426 - MIR SINE MIR -55 207 16 4 1357 1100 68 0 0 chr15 101254088 101254234 -2240740 - B1_Mm SINE Alu 0 147 2 4 1357 1211 131 56 5 chr15 101254273 101254488 -2240486 - URR1A DNA MER1_type 0 226 1 4 1357 215 237 34 0 chr15 101254565 101254624 -2240350 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 1357 226 219 96 0 chr15 101254652 101254725 -2240249 - B4A SINE B4 -20 272 193 4 1357 505 252 117 48 chr15 101254723 101255020 -2239954 - RLTR9B LTR ERVK -19 418 8 4 1357 414 0 0 0 chr15 101255071 101255117 -2239857 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1357 367 216 34 11 chr15 101255117 101255206 -2239768 - B4A SINE B4 -201 91 1 4 1357 263 28 0 27 chr15 101255797 101255834 -2239140 + (TTA)n Simple_repeat Simple_repeat 1 36 0 4 1357 402 245 153 35 chr15 101255888 101256032 -2238942 - RSINE1 SINE B4 -3 162 2 4 1357 207 0 0 0 chr15 101256044 101256067 -2238907 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 1357 360 307 103 44 chr15 101256513 101256765 -2238209 - Arthur1C DNA Tip100 -27 336 70 4 1357 297 0 0 0 chr15 101258722 101258755 -2236219 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1357 858 146 84 18 chr15 101259674 101259841 -2235133 - MTC-int LTR MaLR -1080 178 1 4 1357 1932 188 64 101 chr15 101259854 101260483 -2234491 + MTC-int LTR MaLR 469 1098 -160 4 1357 1294 79 17 0 chr15 101260483 101260660 -2234314 - B2_Mm2 SINE B2 -14 181 2 4 1357 937 288 68 120 chr15 101260660 101260862 -2234112 + MTC-int LTR MaLR 1068 1257 -1 4 1357 1988 144 113 11 chr15 101260863 101261243 -2233731 + MTC LTR MaLR 1 419 -2 4 1357 27 29 0 0 chr15 101266280 101266314 -2228660 + AT_rich Low_complexity Low_complexity 1 34 0 4 1357 22 0 0 0 chr15 101266338 101266360 -2228614 + AT_rich Low_complexity Low_complexity 1 22 0 4 1357 990 236 15 0 chr15 101266367 101266570 -2228404 - B3 SINE B2 0 216 11 4 1357 1263 98 113 0 chr15 101266623 101266826 -2228148 + URR1A DNA MER1_type 1 226 0 4 1357 304 51 51 0 chr15 101268556 101268615 -2226359 + B2_Mm2 SINE B2 134 195 0 4 1357 199 298 107 42 chr15 101269620 101269688 -2225286 + MIRb SINE MIR 89 159 -109 4 1357 258 105 0 0 chr15 101269688 101269726 -2225248 + (TAA)n Simple_repeat Simple_repeat 2 39 0 4 1357 199 298 107 42 chr15 101269726 101269825 -2225149 + MIRb SINE MIR 160 267 -1 4 1357 1095 114 0 0 chr15 101269892 101270058 -2224916 + (TCTCC)n Simple_repeat Simple_repeat 1 166 0 4 1357 356 162 0 20 chr15 101270061 101270162 -2224812 + (TCTCTG)n Simple_repeat Simple_repeat 4 102 0 4 1357 367 266 115 46 chr15 101270272 101270402 -2224572 - ID_B1 SINE B4 0 224 86 4 1357 338 91 18 0 chr15 101271059 101271114 -2223860 + (CCCCCT)n Simple_repeat Simple_repeat 6 61 0 4 1357 266 184 0 0 chr15 101271120 101271169 -2223805 - PB1D10 SINE Alu -16 101 53 4 1357 948 166 7 0 chr15 101272117 101272425 -2222549 + (TATG)n Simple_repeat Simple_repeat 1 310 0 4 1357 1991 93 27 63 chr15 101274313 101274646 -2220328 - ORR1A3 LTR MaLR 0 326 6 4 1357 335 218 2 31 chr15 101274664 101274765 -2220209 + L1MDa LINE L1 1298 1394 -5133 4 1357 677 239 9 69 chr15 101274786 101275002 -2219972 + B3 SINE B2 1 203 -13 4 1357 237 216 0 0 chr15 101275003 101275091 -2219883 + (CA)n Simple_repeat Simple_repeat 2 89 0 4 1357 616 325 110 58 chr15 101275147 101275701 -2219273 - MER54B LTR ERVL -29 764 112 4 1357 297 156 38 38 chr15 101275755 101275835 -2219139 + L1MEf LINE L1 964 1043 -5157 4 1357 976 123 203 16 chr15 101276114 101276296 -2218678 - B3 SINE B2 0 216 1 5 1357 419 337 55 30 chr15 101276382 101276607 -2218367 + L1MC LINE L1 5080 5310 -836 5 1357 1320 206 146 15 chr15 101276719 101277054 -2217920 + MTEb LTR MaLR 1 379 0 5 1357 1507 232 102 29 chr15 101277095 101277575 -2217399 - RLTR20B1 LTR ERVK 0 563 49 5 1357 877 230 96 10 chr15 101277749 101277947 -2217027 - B3 SINE B2 0 216 2 5 1357 315 0 0 0 chr15 101277972 101278007 -2216967 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 5 1357 933 235 56 105 chr15 101278616 101278920 -2216054 + B4 SINE B4 4 292 0 5 1357 309 109 0 0 chr15 101278921 101278976 -2215998 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1357 286 254 0 27 chr15 101278979 101279052 -2215922 + B4 SINE B4 222 292 0 5 1357 654 161 0 0 chr15 101279053 101279208 -2215766 + (CA)n Simple_repeat Simple_repeat 2 156 0 5 1357 651 108 0 0 chr15 101279264 101279384 -2215590 + (CA)n Simple_repeat Simple_repeat 1 120 0 5 1357 244 384 9 9 chr15 101279863 101279976 -2214998 + PB1D10 SINE Alu 1 113 -4 5 1357 1832 137 0 67 chr15 101280058 101280402 -2214572 - ORR1A4 LTR MaLR -8 321 1 5 1357 244 239 67 53 chr15 101280402 101280472 -2214502 + RSINE1 SINE B4 81 151 -14 5 1357 396 0 0 0 chr15 101280475 101280519 -2214455 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1357 809 178 21 34 chr15 101281119 101281322 -2213652 - B2_Mm2 SINE B2 -2 214 1 5 1357 22 35 0 0 chr15 101281330 101281359 -2213615 + AT_rich Low_complexity Low_complexity 1 29 0 5 1357 240 304 185 0 chr15 101281453 101281543 -2213431 + B1F1 SINE Alu 17 123 -26 5 1357 3325 117 22 40 chr15 101281543 101282096 -2212878 - MT2B2 LTR ERVL 0 584 42 5 1357 536 122 0 0 chr15 101282097 101282179 -2212795 + URR1B DNA MER1_type 144 225 0 5 1357 821 80 58 4 chr15 101282320 101282788 -2212186 + (TCTA)n Simple_repeat Simple_repeat 1 493 0 5 1357 207 100 0 0 chr15 101284271 101284301 -2210673 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 1357 232 286 35 105 chr15 101284628 101284714 -2210260 - ID4_ SINE ID -3 80 1 5 1357 467 195 88 9 chr15 101284734 101284848 -2210126 - B1F SINE Alu -7 142 20 5 1357 691 259 20 45 chr15 101286462 101286660 -2208314 - B3A SINE B2 -5 193 1 5 1357 234 0 0 0 chr15 101286815 101286841 -2208133 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1357 283 269 38 13 chr15 101287224 101287303 -2207671 - ID4_ SINE ID -1 82 2 5 1357 741 345 97 29 chr15 101287577 101287998 -2206976 - MT2A LTR ERVL -82 451 2 5 1357 1144 51 19 6 chr15 101294920 101295079 -2199895 + (CATATA)n Simple_repeat Simple_repeat 5 165 0 5 1357 319 341 22 28 chr15 101295708 101295886 -2199088 - MIR SINE MIR -16 246 70 5 1357 7647 93 21 17 chr15 101297092 101298003 -2196971 + Lx3B LINE L1 5875 6770 -203 5 1357 540 0 0 0 chr15 101298003 101298063 -2196911 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 1357 7647 93 21 17 chr15 101298063 101298245 -2196729 + Lx3B LINE L1 6771 6971 -2 5 1357 357 24 0 0 chr15 101298746 101298788 -2196186 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1357 655 279 0 18 chr15 101298789 101298953 -2196021 - RSINE1 SINE B4 -1 164 4 5 1357 645 253 142 6 chr15 101298977 101299160 -2195814 - B3 SINE B2 -5 211 4 5 1357 325 167 0 0 chr15 101299540 101299594 -2195380 + L2c LINE L2 3331 3384 -3 5 1357 687 156 0 0 chr15 101299913 101300164 -2194810 + (TG)n Simple_repeat Simple_repeat 1 251 0 5 1357 306 133 33 0 chr15 101300164 101300224 -2194750 + (TCTG)n Simple_repeat Simple_repeat 2 63 0 5 1357 274 80 20 20 chr15 101301079 101301130 -2193844 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 5 1357 2104 190 91 18 chr15 101301173 101301745 -2193229 - Lx9 LINE L1 -2 7642 7029 5 1357 614 331 42 13 chr15 101302206 101302445 -2192529 - MIR SINE MIR -6 256 11 5 1357 381 70 0 0 chr15 101308774 101308831 -2186143 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1357 420 20 0 0 chr15 101308831 101308879 -2186095 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1357 399 303 14 50 chr15 101310633 101310772 -2184202 - MER20 DNA MER1_type -55 164 31 5 1357 231 36 0 0 chr15 101311049 101311077 -2183897 + (TCTG)n Simple_repeat Simple_repeat 2 29 0 5 1357 200 246 86 29 chr15 101311091 101311189 -2183785 + MIR SINE MIR 101 205 -63 5 1357 291 319 0 0 chr15 101311233 101311302 -2183672 - ID4 SINE ID -1 82 14 5 1357 315 0 0 0 chr15 101311356 101311391 -2183583 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1357 504 290 46 64 chr15 101311682 101311855 -2183119 + MTEa LTR MaLR 10 179 -200 5 1357 317 278 130 65 chr15 101311697 101311897 -2183077 + MLT2B2 LTR ERVL 25 237 -278 5 1357 225 132 0 0 chr15 101312153 101312191 -2182783 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1357 596 259 7 21 chr15 101313460 101313602 -2181372 + ID_B1 SINE B4 79 218 -6 5 1357 697 201 21 18 chr15 101314699 101314979 -2179995 + (CAGA)n Simple_repeat Simple_repeat 1 281 0 5 1357 326 228 10 0 chr15 101314989 101315090 -2179884 + (CAGG)n Simple_repeat Simple_repeat 1 102 0 5 1357 212 137 20 0 chr15 101315088 101315139 -2179835 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 1357 264 293 40 20 chr15 101316156 101316257 -2178717 + MIR3 SINE MIR 100 202 -6 5 1357 546 290 90 78 chr15 101316712 101317056 -2177918 + ORR1E LTR MaLR 9 356 -3 5 1358 295 318 36 0 chr15 101319037 101319147 -2175827 + (CATG)n Simple_repeat Simple_repeat 1 114 0 5 1358 332 319 55 66 chr15 101319149 101319330 -2175644 + RLTR22_Mur LTR ERVK 1306 1484 -364 5 1358 261 0 0 0 chr15 101320276 101320305 -2174669 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 1358 889 167 213 11 chr15 101322596 101322784 -2172190 - URR1A DNA MER1_type 0 226 1 5 1358 346 313 119 81 chr15 101325929 101326273 -2168701 - ORR1E LTR MaLR -2 357 1 5 1358 576 253 153 24 chr15 101326330 101326500 -2168474 + B4A SINE B4 1 192 -100 5 1358 234 333 21 10 chr15 101326576 101326673 -2168301 + MLT1A1 LTR MaLR 291 391 -17 5 1358 217 319 0 67 chr15 101327044 101327222 -2167752 + (CTGGGG)n Simple_repeat Simple_repeat 1 166 0 5 1358 1641 139 88 110 chr15 101328385 101328511 -2166463 - RMER17C LTR ERVK 0 410 285 5 1358 222 62 0 0 chr15 101328511 101328543 -2166431 + (TATAG)n Simple_repeat Simple_repeat 2 33 0 5 1358 1641 139 88 110 chr15 101328543 101328835 -2166139 - RMER17C LTR ERVK -126 284 2 5 1358 403 300 117 43 chr15 101328893 101329228 -2165746 + ORR1E LTR MaLR 1 376 -3 5 1358 3076 171 108 63 chr15 101329511 101330212 -2164762 + RMER19A LTR ERVK 1 733 -4 5 1358 712 206 12 0 chr15 101330797 101330957 -2164017 - RMER17C LTR ERVK -248 162 1 5 1358 221 135 0 0 chr15 101331237 101331274 -2163700 + B3A SINE B2 2 38 -160 5 1358 454 297 106 32 chr15 101331531 101331719 -2163255 + B3 SINE B2 2 203 -13 5 1358 333 233 0 0 chr15 101331719 101331835 -2163139 + (CA)n Simple_repeat Simple_repeat 1 116 0 5 1358 900 88 0 0 chr15 101331895 101332020 -2162954 + B1_Mus1 SINE Alu 1 125 -23 5 1358 405 0 0 0 chr15 101332020 101332065 -2162909 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1358 1231 138 13 60 chr15 101333469 101333701 -2161273 + Lx3C LINE L1 6549 6769 -207 5 1358 1429 153 268 12 chr15 101333734 101334059 -2160915 - RMER17C LTR ERVK -2 408 1 5 1358 3132 62 10 15 chr15 101334410 101334821 -2160153 - L1Md_F2 LINE L1 0 6582 6174 5 1358 256 24 24 24 chr15 101334985 101335027 -2159947 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 5 1358 734 97 0 9 chr15 101335431 101335545 -2159429 + (TCCC)n Simple_repeat Simple_repeat 4 116 0 5 1358 401 266 9 60 chr15 101335545 101335661 -2159313 - PB1D10 SINE Alu -7 110 1 5 1358 207 393 66 7 chr15 101335671 101335822 -2159152 + MER91A DNA Tip100 1 160 -36 5 1358 315 261 29 25 chr15 101336296 101336455 -2158519 - L1_Mur1 LINE L1 -552 5604 5458 5 1358 195 42 0 0 chr15 101338157 101338181 -2156793 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1358 336 333 96 12 chr15 101338932 101339099 -2155875 + MIRc SINE MIR 72 252 -16 5 1358 304 128 10 5 chr15 101339239 101339299 -2155675 - B1_Mus1 SINE Alu -50 67 7 5 1358 268 217 39 104 chr15 101339255 101339332 -2155642 - B4 SINE B4 -157 135 64 5 1358 2496 93 48 47 chr15 101339479 101339927 -2155047 + RMER16 LTR ERVK 1 533 0 5 1358 182 167 0 53 chr15 101340753 101340791 -2154183 + L3 LINE CR1 2087 2122 -2367 5 1358 219 221 28 0 chr15 101341374 101341435 -2153539 - MIR SINE MIR -120 148 83 5 1358 1623 238 77 0 chr15 101341784 101342162 -2152812 - MTD LTR MaLR -1 418 12 5 1358 377 174 60 27 chr15 101342526 101342638 -2152336 - ORR1D1 LTR MaLR -86 292 158 5 1358 362 195 12 0 chr15 101342638 101342720 -2152254 + GA-rich Low_complexity Low_complexity 1 83 0 5 1358 526 275 27 7 chr15 101342720 101342870 -2152104 - ORR1D1 LTR MaLR -188 186 34 5 1358 1950 116 3 22 chr15 101342898 101343216 -2151758 + ORR1A3 LTR MaLR 15 326 0 5 1358 345 350 42 7 chr15 101343300 101343444 -2151530 - HAL1-2a_MD LINE L1 -532 2492 2344 5 1358 4441 140 79 0 chr15 101343725 101344405 -2150569 - RMER19A LTR ERVK -3 734 1 5 1358 403 283 116 16 chr15 101345235 101345425 -2149549 + B4A SINE B4 74 282 -10 5 1358 1258 106 37 5 chr15 101345453 101345642 -2149332 + B2_Mm2 SINE B2 1 195 0 5 1358 349 184 26 0 chr15 101345642 101345718 -2149256 + MTC-int LTR MaLR 1181 1258 0 5 1358 2260 169 47 15 chr15 101345718 101346126 -2148848 + MTC LTR MaLR 1 421 0 5 1358 873 163 6 11 chr15 101347835 101348015 -2146959 + CT-rich Low_complexity Low_complexity 2 180 0 5 1358 525 45 0 0 chr15 101348017 101348024 -2146950 + (TTC)n Simple_repeat Simple_repeat 2 8 0 5 1358 1254 95 0 0 chr15 101348024 101348203 -2146771 + (TCC)n Simple_repeat Simple_repeat 2 180 0 6 1358 525 45 0 0 chr15 101348203 101348261 -2146713 + (TTC)n Simple_repeat Simple_repeat 1 58 0 6 1358 319 355 98 30 chr15 101349201 101349436 -2145538 + L2a LINE L2 2973 3223 -203 6 1358 486 0 0 0 chr15 101349437 101349491 -2145483 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 1358 362 21 21 0 chr15 101349491 101349538 -2145436 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 1358 770 313 57 23 chr15 101349553 101349818 -2145156 - B4A SINE B4 -8 284 11 6 1358 191 357 60 30 chr15 101349904 101350037 -2144937 + L2a LINE L2 3285 3421 -5 6 1358 258 307 37 66 chr15 101350647 101350783 -2144191 - MIRb SINE MIR -16 252 121 6 1358 232 291 17 8 chr15 101350919 101351037 -2143937 - L1MEf LINE L1 -4100 2540 2422 6 1358 454 259 66 59 chr15 101351052 101351204 -2143770 + RSINE1 SINE B4 2 154 -11 6 1358 351 0 0 0 chr15 101351314 101351353 -2143621 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1358 432 0 0 0 chr15 101351353 101351400 -2143574 + (GA)n Simple_repeat Simple_repeat 2 49 0 6 1358 337 333 111 0 chr15 101351406 101351514 -2143460 - B1F SINE Alu -27 122 3 6 1358 235 299 15 0 chr15 101351928 101351995 -2142979 + ID4 SINE ID 10 77 -6 6 1358 308 333 24 48 chr15 101352030 101352156 -2142818 - L1MEf LINE L1 -4762 1878 1756 6 1358 313 274 121 10 chr15 101352165 101352364 -2142610 - L1MEf LINE L1 -5163 1477 1257 6 1358 248 321 12 0 chr15 101352377 101352458 -2142516 - ID4 SINE ID -1 82 1 6 1358 250 321 25 144 chr15 101352472 101352632 -2142342 - B1F1 SINE Alu -8 141 1 6 1358 322 328 34 42 chr15 101352515 101352633 -2142341 - ID_B1 SINE B4 -27 197 81 6 1358 369 384 12 6 chr15 101352643 101352816 -2142158 - L1MEf LINE L1 -5377 1263 1090 6 1358 495 0 0 0 chr15 101352819 101352874 -2142100 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 1358 1260 30 18 0 chr15 101352878 101353043 -2141931 + (GGGAGA)n Simple_repeat Simple_repeat 5 172 0 6 1358 389 329 82 57 chr15 101353058 101353553 -2141421 - L1MEf LINE L1 -5492 1055 641 6 1358 265 337 128 28 chr15 101353623 101353803 -2141171 - L1MEf LINE L1 -5910 730 533 6 1358 491 233 197 33 chr15 101354047 101354275 -2140699 - RMER12 LTR ERVK -133 1189 975 6 1358 436 327 130 37 chr15 101354543 101354867 -2140107 + L2c LINE L2 3033 3386 -1 6 1358 352 312 98 27 chr15 101354879 101355103 -2139871 - L2 LINE L2 -434 2985 2746 6 1358 576 53 0 0 chr15 101357659 101357735 -2137239 + (GA)n Simple_repeat Simple_repeat 1 76 0 6 1358 618 196 9 0 chr15 101360290 101360402 -2134572 + RSINE1 SINE B4 4 116 -49 6 1358 279 0 0 0 chr15 101360444 101360475 -2134499 + (A)n Simple_repeat Simple_repeat 1 31 0 6 1358 370 339 166 0 chr15 101364423 101364700 -2130274 + L2 LINE L2 1995 2317 -1102 6 1358 279 71 0 0 chr15 101364748 101364790 -2130184 + (TCTG)n Simple_repeat Simple_repeat 4 45 0 6 1358 662 274 17 17 chr15 101364790 101364961 -2130013 - B3A SINE B2 -21 177 5 6 1358 225 350 195 21 chr15 101364979 101365559 -2129415 + L2 LINE L2 2401 3081 -338 6 1358 1620 0 0 0 chr15 101367516 101367696 -2127278 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 6 1358 669 143 0 28 chr15 101367698 101367842 -2127132 + C-rich Low_complexity Low_complexity 4 143 0 6 1358 401 169 0 15 chr15 101367848 101367914 -2127060 - ID4 SINE ID -16 67 3 6 1358 831 299 142 12 chr15 101369170 101369579 -2125395 - L1MB7 LINE L1 -178 6006 5545 6 1358 379 0 0 38 chr15 101369753 101369806 -2125168 + (AGGGGG)n Simple_repeat Simple_repeat 2 52 0 6 1358 948 128 0 39 chr15 101370078 101370232 -2124742 + B1_Mur2 SINE Alu 2 149 0 6 1358 22 0 0 0 chr15 101371641 101371663 -2123311 + AT_rich Low_complexity Low_complexity 1 22 0 6 1358 204 194 0 0 chr15 101372537 101372573 -2122401 + C-rich Low_complexity Low_complexity 1 36 0 6 1358 200 73 0 68 chr15 101372981 101373025 -2121949 + (TGGGGG)n Simple_repeat Simple_repeat 6 46 0 6 1358 270 341 65 8 chr15 101374765 101374889 -2120085 + L2a LINE L2 3289 3419 -7 6 1358 196 333 106 0 chr15 101376260 101376326 -2118648 + L2a LINE L2 3347 3419 -7 6 1358 272 313 88 68 chr15 101377257 101377449 -2117525 + MIR SINE MIR 32 227 -35 6 1358 649 186 92 8 chr15 101377713 101377843 -2117131 - B1F SINE Alu -8 141 1 6 1358 756 33 0 0 chr15 101380294 101380385 -2114589 + (GAA)n Simple_repeat Simple_repeat 2 92 0 6 1358 294 316 32 0 chr15 101380402 101380497 -2114477 + PB1D7 SINE Alu 3 100 -20 6 1358 833 123 18 24 chr15 101381703 101381869 -2113105 + GA-rich Low_complexity Low_complexity 4 168 0 6 1358 201 367 0 0 chr15 101383636 101383745 -2111229 + (CCG)n Simple_repeat Simple_repeat 3 111 0 6 1358 255 270 0 0 chr15 101384083 101384146 -2110828 - MIR SINE MIR -115 147 85 6 1358 204 232 52 35 chr15 101385216 101385274 -2109700 - MIRb SINE MIR -18 250 192 6 1358 1873 148 178 6 chr15 101386239 101386598 -2108376 + MTC LTR MaLR 1 421 0 6 1358 244 266 0 15 chr15 101387809 101387874 -2107100 + (TATATG)n Simple_repeat Simple_repeat 1 64 0 6 1358 204 301 155 0 chr15 101389433 101389536 -2105438 + MIR SINE MIR 27 145 -63 6 1358 576 77 0 0 chr15 101390011 101390089 -2104885 + (TCC)n Simple_repeat Simple_repeat 3 80 0 6 1358 360 0 0 0 chr15 101391331 101391371 -2103603 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1358 205 300 43 0 chr15 101391526 101391596 -2103378 + MIRc SINE MIR 30 102 -166 6 1358 225 265 87 14 chr15 101396222 101396291 -2098683 + PB1D7 SINE Alu 38 111 -9 6 1358 273 282 28 0 chr15 101397231 101397302 -2097672 - MIRb SINE MIR -78 190 118 6 1358 593 207 234 6 chr15 101397415 101397590 -2097384 + B3 SINE B2 2 216 0 6 1358 714 289 6 44 chr15 101397601 101397782 -2097192 - B3A SINE B2 -9 189 16 6 1358 180 0 0 0 chr15 101397788 101397808 -2097166 + (CAAAA)n Simple_repeat Simple_repeat 4 23 0 6 1358 491 370 11 16 chr15 101397833 101398020 -2096954 - MIR SINE MIR -21 241 56 6 1358 416 19 19 0 chr15 101399161 101399214 -2095760 + (TGG)n Simple_repeat Simple_repeat 3 56 0 6 1358 211 203 66 33 chr15 101401890 101401951 -2093023 - ID SINE ID -160 64 2 6 1358 215 283 0 0 chr15 101401951 101402004 -2092970 - PB1D7 SINE Alu -2 118 66 6 1358 360 0 0 0 chr15 101405537 101405577 -2089397 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1358 350 317 54 40 chr15 101405581 101405729 -2089245 - RSINE1 SINE B4 -14 151 2 6 1358 12895 80 9 8 chr15 101407139 101409691 -2085283 - L1_Mus1 LINE L1 0 6567 4038 6 1358 930 246 88 22 chr15 101409899 101410173 -2084801 - B4 SINE B4 0 292 1 6 1358 1272 89 0 0 chr15 101411736 101411916 -2083058 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 1358 226 324 35 26 chr15 101414129 101414243 -2080731 + L3 LINE CR1 3997 4111 -378 6 1358 462 114 0 0 chr15 101415910 101415980 -2078994 + (TC)n Simple_repeat Simple_repeat 1 70 0 6 1358 249 33 0 0 chr15 101415980 101416010 -2078964 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1358 327 290 112 99 chr15 101416050 101416211 -2078763 + MTEa LTR MaLR 3 165 -214 6 1358 252 352 120 30 chr15 101416227 101416394 -2078580 + MT2A LTR ERVL 208 389 -144 6 1358 467 289 93 89 chr15 101416420 101416667 -2078307 + MTEa LTR MaLR 132 379 0 6 1358 201 94 0 0 chr15 101418386 101418418 -2076556 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1358 355 345 0 0 chr15 101419035 101419119 -2075855 - B4A SINE B4 -208 84 1 6 1358 2318 190 49 4 chr15 101419708 101419972 -2075002 - MYSERV16_I-int LTR ERVK -534 1792 1524 6 1358 360 0 0 0 chr15 101419972 101420012 -2074962 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1358 2318 190 49 4 chr15 101420012 101420218 -2074756 - MYSERV16_I-int LTR ERVK -803 1523 1303 6 1358 1331 157 104 44 chr15 101420229 101420666 -2074308 - RLTR1B LTR ERV1 -76 436 1 6 1358 4855 38 57 0 chr15 101420666 101421245 -2073729 - RLTR1B-int LTR ERV1 0 3299 2688 6 1358 9641 75 43 87 chr15 101421243 101422723 -2072251 - RLTR1B-int LTR ERV1 -765 2534 1119 6 1358 1559 131 14 21 chr15 101422719 101423008 -2071966 - MYSERV16_I-int LTR ERVK -1007 1319 1033 6 1358 312 295 93 28 chr15 101423008 101423116 -2071858 - RMER4A LTR ERVK -42 424 310 6 1358 4739 174 21 40 chr15 101423120 101424088 -2070886 - MYSERV16_I-int LTR ERVK -1474 1368 1 6 1358 360 0 0 0 chr15 101424908 101424948 -2070026 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 6 1358 1744 218 48 50 chr15 101424955 101425433 -2069541 - RLTR11A LTR ERVK -28 500 24 6 1358 416 182 122 76 chr15 101425436 101425567 -2069407 + Lx6 LINE L1 7313 7449 -11 6 1358 413 19 19 0 chr15 101425584 101425638 -2069336 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 1358 709 244 40 17 chr15 101425639 101425814 -2069160 + RCHARR1 DNA MER1_type 72 250 -724 6 1358 484 185 12 43 chr15 101425814 101425978 -2068996 + (CATA)n Simple_repeat Simple_repeat 1 159 0 6 1358 1249 209 333 20 chr15 101425984 101426471 -2068503 + RCHARR1 DNA MER1_type 209 847 -127 6 1358 648 231 18 12 chr15 101426460 101426631 -2068343 + RCHARR1 DNA MER1_type 795 966 -8 6 1358 1181 75 0 0 chr15 101427131 101427278 -2067696 - B1_Mus2 SINE Alu 0 147 1 6 1358 1404 0 0 0 chr15 101427321 101427477 -2067497 + (TCTCCC)n Simple_repeat Simple_repeat 4 159 0 6 1358 189 0 0 0 chr15 101427478 101427499 -2067475 + (TCTCTG)n Simple_repeat Simple_repeat 4 24 0 6 1358 612 290 64 17 chr15 101427502 101427674 -2067300 - B3 SINE B2 -36 180 1 6 1358 275 320 0 26 chr15 101428261 101428338 -2066636 - PB1D7 SINE Alu -6 114 40 6 1358 420 241 0 30 chr15 101428341 101428577 -2066397 + CT-rich Low_complexity Low_complexity 1 228 0 6 1358 201 121 0 0 chr15 101428577 101428610 -2066364 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 6 1358 690 100 0 0 chr15 101428693 101428793 -2066181 + (TTTC)n Simple_repeat Simple_repeat 2 101 0 6 1358 951 325 101 15 chr15 101428867 101429582 -2065392 - L1MC3 LINE L1 -104 7681 6906 6 1358 712 333 65 68 chr15 101429745 101429951 -2065023 - MLT2B4 LTR ERVL 0 397 217 6 1358 402 39 0 0 chr15 101429951 101430003 -2064971 + (TC)n Simple_repeat Simple_repeat 2 53 0 6 1358 712 297 81 42 chr15 101430003 101430197 -2064777 - MLT2B4 LTR ERVL -333 223 13 6 1358 362 285 14 71 chr15 101430226 101430366 -2064608 - L1MC3 LINE L1 -1252 6790 6659 6 1358 273 221 0 0 chr15 101430367 101430435 -2064539 + (CATATA)n Simple_repeat Simple_repeat 6 73 0 6 1358 307 242 169 36 chr15 101430435 101430494 -2064480 - L1MC3 LINE L1 -1139 6646 6580 6 1358 428 222 0 0 chr15 101430494 101430575 -2064399 - ID4 SINE ID -2 81 1 6 1358 307 242 169 36 chr15 101430575 101430734 -2064240 - L1MC3 LINE L1 -1206 6579 6400 6 1358 668 291 114 88 chr15 101430738 101431134 -2063840 + MLT2D LTR ERVL 9 414 0 6 1358 618 139 107 57 chr15 101431241 101431363 -2063611 + RMER4B LTR ERVK 458 585 0 6 1358 3566 151 17 14 chr15 101431363 101431942 -2063032 - MurERV4-int LTR ERVK -2665 2595 2015 6 1358 4818 153 17 27 chr15 101432370 101433196 -2061778 - MurERV4-int LTR ERVK -3374 1886 1069 6 1358 37512 52 10 8 chr15 101433196 101439143 -2055831 - L1Md_F3 LINE L1 0 6584 630 6 1358 1808 188 29 3 chr15 101441489 101441863 -2053111 - L1_Mur3 LINE L1 -1836 4044 3661 7 1358 1659 137 101 0 chr15 101441863 101442141 -2052833 - Lx LINE L1 0 6654 6349 7 1358 943 284 39 18 chr15 101442141 101442190 -2052784 - L1M2 LINE L1 -2452 3691 3645 7 1358 2015 213 16 26 chr15 101442451 101442879 -2052095 - RLTR11A2 LTR ERVK 0 527 104 7 1358 1226 197 4 21 chr15 101442881 101443119 -2051855 + RMER19B LTR ERVK 669 902 0 7 1358 3161 136 49 0 chr15 101443130 101443617 -2051357 + MurERV4_19-int LTR ERVK 717 1227 -4553 7 1358 5064 124 46 1 chr15 101443614 101444413 -2050561 + MurERV4_19-int LTR ERVK 3000 3834 -1946 7 1358 771 176 0 0 chr15 101444414 101444545 -2050429 - Lx2B LINE L1 -663 6337 6207 7 1358 2101 168 48 0 chr15 101444545 101444902 -2050072 - MurERV4-int LTR ERVK -3346 1914 1541 7 1358 1502 143 51 4 chr15 101444894 101445147 -2049827 - MurERV4-int LTR ERVK -4949 311 47 7 1358 2496 192 86 36 chr15 101445151 101445708 -2049266 - RMER4B LTR ERVK 0 585 1 7 1358 405 58 0 0 chr15 101446001 101446053 -2048921 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 1358 383 271 56 78 chr15 101446158 101446442 -2048532 - L1MC4 LINE L1 -1605 6437 6160 7 1358 1678 169 15 62 chr15 101446565 101446906 -2048068 - Lx7 LINE L1 0 7696 7372 7 1358 3745 219 69 20 chr15 101446906 101447846 -2047128 - Lx7 LINE L1 -700 6996 6011 7 1358 793 209 85 0 chr15 101447853 101448054 -2046920 - Lx7 LINE L1 -441 5439 5222 7 1358 1916 229 108 36 chr15 101448013 101448681 -2046293 - RMER1C Other Other 0 1342 43 7 1358 5248 207 37 48 chr15 101448747 101449413 -2045561 - L1_Mur3 LINE L1 -581 5299 4626 7 1358 213 39 0 0 chr15 101449413 101449439 -2045535 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 169 5248 192 112 29 chr15 101449439 101451212 -2043762 - L1_Mur3 LINE L1 -1255 4625 2366 7 1359 672 141 8 30 chr15 101451216 101451348 -2043626 - MTC-int LTR MaLR -1000 258 130 7 1359 591 157 8 16 chr15 101451549 101451678 -2043296 + GA-rich Low_complexity Low_complexity 1 128 0 7 1359 11646 80 50 33 chr15 101452468 101452751 -2042223 + RLTR22_Mus LTR ERVK 1 303 -1505 7 1359 1310 41 0 0 chr15 101452751 101452897 -2042077 + B1_Mus1 SINE Alu 2 147 -1 7 1359 11646 80 50 33 chr15 101452897 101454391 -2040583 + RLTR22_Mus LTR ERVK 304 1808 0 7 1359 3520 62 2 44 chr15 101456776 101457260 -2037714 - L1_Mus2 LINE L1 0 6566 6125 7 1359 423 298 190 6 chr15 101459359 101459538 -2035436 + B3 SINE B2 1 212 -4 7 1359 792 250 25 5 chr15 101459699 101459896 -2035078 - B3 SINE B2 -15 201 1 7 1359 823 114 0 8 chr15 101459988 101460112 -2034862 - RMER19B LTR ERVK 0 902 780 7 1359 1969 55 0 0 chr15 101460112 101460350 -2034624 - L1_Mus4 LINE L1 -315 6321 6084 7 1359 2223 93 3 7 chr15 101460350 101460653 -2034321 + L1_Mus4 LINE L1 6333 6634 -2 7 1359 4739 170 16 27 chr15 101460653 101461457 -2033517 - RMER19B LTR ERVK -107 795 1 7 1359 5803 118 58 98 chr15 101461457 101461895 -2033079 - MurERV4_19-int LTR ERVK 0 5780 5429 7 1359 547 39 77 0 chr15 101461895 101461973 -2033001 - L1Md_F3 LINE L1 0 6584 6501 7 1359 5803 161 53 61 chr15 101461973 101463263 -2031711 - MurERV4_19-int LTR ERVK -161 5619 4339 7 1359 26 30 0 0 chr15 101463287 101463320 -2031654 + AT_rich Low_complexity Low_complexity 1 33 0 7 1359 3806 179 30 16 chr15 101463323 101463390 -2031584 - L1_Mur3 LINE L1 -1184 4696 4620 7 1359 252 0 0 0 chr15 101463390 101463418 -2031556 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 1359 3806 179 30 16 chr15 101463418 101464096 -2030878 - L1_Mur3 LINE L1 -1261 4619 3942 7 1359 336 268 55 11 chr15 101464124 101464222 -2030752 - B3A SINE B2 -94 101 1 7 1359 244 135 56 37 chr15 101464241 101464295 -2030679 - L1M2 LINE L1 -3955 2188 2134 7 1359 523 254 0 76 chr15 101464668 101464813 -2030161 + ID_B1 SINE B4 85 218 -6 7 1359 528 200 21 0 chr15 101464814 101464954 -2030020 + (TA)n Simple_repeat Simple_repeat 1 143 0 7 1359 229 51 51 0 chr15 101465025 101465064 -2029910 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 7 1359 3482 132 2 6 chr15 101465087 101465581 -2029393 - Lx4A LINE L1 -2 7056 6565 7 1359 1292 174 13 4 chr15 101466165 101466402 -2028572 - RLTR11A2 LTR ERVK 0 527 289 7 1359 5079 190 40 1 chr15 101466403 101467107 -2027867 + L1_Mur3 LINE L1 3580 4310 -1570 7 1359 207 0 0 0 chr15 101467107 101467130 -2027844 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 7 1359 5079 190 40 1 chr15 101467130 101467436 -2027538 + L1_Mur3 LINE L1 4311 4622 -1258 7 1359 513 0 0 0 chr15 101467436 101467493 -2027481 + (CA)n Simple_repeat Simple_repeat 2 58 0 7 1359 5079 190 40 1 chr15 101467493 101467556 -2027418 + L1_Mur3 LINE L1 4623 4695 -1185 7 1359 648 227 141 43 chr15 101467726 101467910 -2027064 + B3 SINE B2 1 202 -14 7 1359 946 279 5 0 chr15 101468093 101468308 -2026666 - B3 SINE B2 0 216 1 7 1359 269 171 29 0 chr15 101469817 101469880 -2025094 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 7 1359 570 15 0 0 chr15 101469880 101469947 -2025027 + (CA)n Simple_repeat Simple_repeat 2 68 0 7 1359 269 171 29 0 chr15 101469947 101469953 -2025021 + (TATATG)n Simple_repeat Simple_repeat 2 7 0 7 1359 257 287 57 103 chr15 101470745 101470939 -2024035 - RMER20A LTR ERVK -276 240 56 7 1359 666 152 9 0 chr15 101470994 101471106 -2023868 + MurERV4-int LTR ERVK 1016 1128 -4132 7 1359 251 325 100 24 chr15 101471503 101471673 -2023301 + Lx8 LINE L1 7264 7446 -27 7 1359 757 200 76 12 chr15 101474364 101474536 -2020438 - B2_Mm2 SINE B2 -9 186 4 7 1359 204 216 0 0 chr15 101475793 101475830 -2019144 + GA-rich Low_complexity Low_complexity 2 38 0 7 1359 674 105 0 0 chr15 101478517 101478612 -2016362 + B1_Mus2 SINE Alu 49 143 -4 7 1359 471 35 0 0 chr15 101478612 101478669 -2016305 + (TA)n Simple_repeat Simple_repeat 2 58 0 7 1359 568 330 16 0 chr15 101478704 101478886 -2016088 + B3 SINE B2 32 216 0 7 1359 624 254 88 46 chr15 101479073 101479267 -2015707 - B3 SINE B2 -14 202 1 7 1359 3501 184 28 21 chr15 101479435 101480184 -2014790 - L1_Mur3 LINE L1 -1184 4696 3943 7 1359 424 167 0 0 chr15 101480204 101480270 -2014704 - B2_Mm2 SINE B2 -129 66 1 7 1359 592 208 20 20 chr15 101480270 101480417 -2014557 - L1_Mur3 LINE L1 -2226 3654 3508 7 1359 2286 283 33 91 chr15 101480467 101480753 -2014221 - MYSERV16_I-int LTR ERVK -675 1651 1378 7 1359 5373 25 5 0 chr15 101480753 101481341 -2013633 - L1Md_F2 LINE L1 0 6582 5992 7 1359 2286 286 60 78 chr15 101481341 101482747 -2012227 - MYSERV16_I-int LTR ERVK -949 1377 2 7 1359 225 0 0 0 chr15 101482949 101482974 -2012000 + (TTA)n Simple_repeat Simple_repeat 1 25 0 7 1359 442 281 8 55 chr15 101482983 101483111 -2011863 - B1_Mur3 SINE Alu -10 139 18 7 1359 2068 238 22 10 chr15 101483985 101484477 -2010497 - RLTR11A2 LTR ERVK -7 520 23 7 1359 296 271 28 9 chr15 101484477 101484585 -2010389 + (TA)n Simple_repeat Simple_repeat 1 110 0 7 1359 2209 246 12 76 chr15 101484599 101484721 -2010253 + RMER19C LTR ERVK 3 125 -486 7 1359 180 0 0 0 chr15 101484721 101484741 -2010233 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 7 1359 2209 246 12 76 chr15 101484741 101485266 -2009708 + RMER19C LTR ERVK 126 609 -2 7 1359 733 199 25 0 chr15 101485272 101485433 -2009541 + L1_Mur3 LINE L1 3492 3656 -2224 7 1359 2528 64 10 0 chr15 101485427 101485741 -2009233 - L1_Mus3 LINE L1 -534 6104 5788 7 1359 2370 112 9 0 chr15 101485736 101486083 -2008891 + L1_Mus3 LINE L1 6257 6606 -32 7 1359 36190 36 0 0 chr15 101486084 101491555 -2003419 + L1Md_T LINE L1 22 5589 -297 7 1359 9601 5 0 0 chr15 101491555 101492551 -2002423 + L1Md_T LINE L1 5590 6585 0 7 1359 760 223 0 45 chr15 101492584 101492805 -2002169 + L1_Mur3 LINE L1 3647 3857 -2023 7 1359 2099 241 62 37 chr15 101492796 101493488 -2001486 + RMER1C Other Other 45 1334 -8 7 1359 837 192 18 8 chr15 101493493 101493677 -2001297 + L1_Mur3 LINE L1 5299 5524 -665 7 1359 1529 248 36 25 chr15 101493786 101494233 -2000741 + Lx2B LINE L1 6549 7000 0 7 1359 513 0 0 0 chr15 101494266 101494323 -2000651 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 7 1359 733 75 24 36 chr15 101494345 101494510 -2000464 + (TAGA)n Simple_repeat Simple_repeat 4 166 0 7 1359 2465 247 70 49 chr15 101494517 101495293 -1999681 + Lx7 LINE L1 6201 6992 -704 7 1359 1409 163 36 55 chr15 101495299 101495629 -1999345 + Lx7 LINE L1 7373 7696 0 7 1359 387 326 43 47 chr15 101495724 101496023 -1998951 + L1MC3 LINE L1 6102 6399 -1386 7 1359 660 159 0 0 chr15 101496139 101496296 -1998678 + GA-rich Low_complexity Low_complexity 2 158 0 7 1359 894 194 37 36 chr15 101496581 101496882 -1998092 + RMER4B LTR ERVK 250 585 0 7 1359 2013 171 175 17 chr15 101496883 101497594 -1997380 + MurERV4-int LTR ERVK 2 923 -4337 7 1359 2237 167 22 27 chr15 101497603 101497731 -1997243 + MurERV4-int LTR ERVK 617 751 -4509 7 1359 790 276 65 68 chr15 101497731 101498100 -1996874 - RLTR9A LTR ERVK 0 368 1 7 1359 2237 167 22 27 chr15 101498100 101498378 -1996596 + MurERV4-int LTR ERVK 752 1021 -4239 7 1359 527 239 138 30 chr15 101498519 101498752 -1996222 - RMER20B LTR ERVK -228 399 134 7 1359 5007 185 14 7 chr15 101498905 101499792 -1995182 + MurERV4-int LTR ERVK 1016 1908 -3352 7 1359 849 163 0 0 chr15 101499798 101499939 -1995035 + Lx2B LINE L1 6207 6347 -653 7 1359 517 265 82 72 chr15 101500001 101500270 -1994704 + MurERV4_19-int LTR ERVK 4943 5371 -409 1 1359 283 333 24 67 chr15 101500270 101500434 -1994540 + RMER4A LTR ERVK 261 417 -49 2 1359 2836 276 43 38 chr15 101500435 101500635 -1994339 + MYSERV-int LTR ERVK 1037 1238 -1088 3 1359 2691 88 8 3 chr15 101500635 101501000 -1993974 - Lx3_Mus LINE L1 0 7009 6643 4 1359 3348 237 70 23 chr15 101501000 101502080 -1992894 + MYSERV-int LTR ERVK 5415 6548 -2 3 1359 361 155 0 0 chr15 101502081 101502139 -1992835 + RLTR11A2 LTR ERVK 1 58 -469 3 1359 468 0 0 0 chr15 101502316 101502368 -1992606 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1359 435 333 57 0 chr15 101503072 101503249 -1991725 - B4A SINE B4 -4 288 102 6 1359 216 0 0 0 chr15 101510759 101510783 -1984191 + (GGCTG)n Simple_repeat Simple_repeat 4 27 0 7 1359 752 282 14 14 chr15 101511426 101511638 -1983336 + B3 SINE B2 5 216 0 8 1359 715 253 35 40 chr15 101511818 101512020 -1982954 - B3 SINE B2 -15 201 1 9 1359 1141 215 79 0 chr15 101512190 101512455 -1982519 - L1_Mur3 LINE L1 -1184 4696 4411 1 1359 19663 151 18 20 chr15 101512452 101515409 -1979565 - Lx5 LINE L1 -604 6446 3486 1 1359 207 88 0 0 chr15 101515409 101515443 -1979531 + (ATTG)n Simple_repeat Simple_repeat 2 35 0 1 1359 19663 147 16 19 chr15 101515443 101516648 -1978326 - Lx5 LINE L1 -2392 3485 2291 1 1359 4303 155 99 81 chr15 101516648 101517534 -1977440 - RMER19B LTR ERVK 0 902 1 1 1359 2308 198 52 7 chr15 101517534 101517761 -1977213 - Lx5 LINE L1 -3581 2296 2059 1 1359 384 119 0 0 chr15 101517761 101517820 -1977154 + (TAG)n Simple_repeat Simple_repeat 3 61 0 1 1359 2308 198 52 7 chr15 101517820 101518147 -1976827 - Lx5 LINE L1 -3819 2058 1717 1 1359 854 296 81 33 chr15 101518150 101518538 -1976436 + Lx8 LINE L1 6641 7053 -420 1 1359 982 129 7 0 chr15 101518538 101518678 -1976296 + B1_Mus1 SINE Alu 1 141 -7 1 1359 432 0 0 0 chr15 101518680 101518728 -1976246 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 1359 854 296 81 33 chr15 101518728 101518758 -1976216 + Lx8 LINE L1 7054 7082 -391 1 1359 23 54 0 0 chr15 101520179 101520216 -1974758 + AT_rich Low_complexity Low_complexity 1 37 0 1 1359 1062 150 0 31 chr15 101521370 101521382 -1973592 - B2_Mm2 SINE B2 -5 190 182 1 1359 229 26 0 50 chr15 101521382 101521422 -1973552 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2 1359 1062 150 0 31 chr15 101521422 101521602 -1973372 - B2_Mm2 SINE B2 -14 181 4 1 1359 183 42 0 0 chr15 101526754 101526778 -1968196 + (TGGGGG)n Simple_repeat Simple_repeat 6 29 0 2 1359 508 227 38 30 chr15 101527716 101527848 -1967126 - B1_Mur1 SINE Alu -16 133 1 2 1359 326 259 11 45 chr15 101528589 101528678 -1966296 + HAL1-3A_ME LINE L1 1964 2049 -809 2 1359 193 194 43 0 chr15 101528678 101528771 -1966203 + (CAGA)n Simple_repeat Simple_repeat 2 98 0 2 1359 408 185 23 11 chr15 101528841 101529016 -1965958 + (CAGA)n Simple_repeat Simple_repeat 2 178 0 2 1359 373 274 8 25 chr15 101530725 101530845 -1964129 - L1ME2 LINE L1 -279 6165 6048 2 1359 244 217 0 0 chr15 101530858 101530918 -1964056 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 1359 513 327 180 23 chr15 101530918 101531262 -1963712 - L1ME2 LINE L1 -119 6045 5648 2 1359 1486 307 97 29 chr15 101531376 101531670 -1963304 - L1MC1 LINE L1 -98 6410 6100 2 1359 732 98 23 0 chr15 101531670 101531803 -1963171 + (TAGA)n Simple_repeat Simple_repeat 3 138 0 2 1359 1486 294 85 37 chr15 101531803 101533074 -1961900 - L1MC1 LINE L1 -409 6099 4739 2 1359 424 280 103 4 chr15 101533261 101533494 -1961480 - L1MC1 LINE L1 -4611 1897 1642 2 1359 557 108 4 73 chr15 101533496 101533744 -1961230 + (TCTCTG)n Simple_repeat Simple_repeat 1 230 0 3 1359 405 188 16 0 chr15 101533782 101533846 -1961128 - ID4_ SINE ID -15 68 4 3 1359 456 285 85 0 chr15 101533867 101533997 -1960977 - B1F SINE Alu -8 141 1 3 1359 274 248 38 23 chr15 101534011 101534042 -1960932 + ORR1B1-int LTR MaLR 614 646 -863 3 1359 751 200 14 0 chr15 101534042 101534187 -1960787 + B1_Mus1 SINE Alu 1 147 -1 3 1359 268 212 30 15 chr15 101534198 101534265 -1960709 - L1MC1 LINE L1 -4897 1611 1544 2 1359 508 262 56 6 chr15 101534627 101534788 -1960186 - L1MC1 LINE L1 -6033 475 307 2 1359 323 314 93 21 chr15 101534807 101534947 -1960027 - L1MC1 LINE L1 -6291 217 68 2 1359 420 382 67 14 chr15 101535179 101535535 -1959439 + LTR52-int LTR ERVL 127 501 -3055 3 1359 322 308 11 40 chr15 101535934 101536110 -1958864 + LTR52-int LTR ERVL 1067 1237 -2319 3 1359 299 292 93 85 chr15 101536226 101536473 -1958501 + LTR52-int LTR ERVL 1492 1740 -3945 3 1359 387 317 23 23 chr15 101536888 101537059 -1957915 + LTR52-int LTR ERVL 2301 2471 -1085 3 1359 504 293 7 28 chr15 101537129 101537399 -1957575 + C-rich Low_complexity Low_complexity 1 264 0 3 1359 615 140 35 0 chr15 101539709 101539880 -1955094 + (TG)n Simple_repeat Simple_repeat 1 177 0 3 1359 648 133 25 25 chr15 101539901 101540143 -1954831 + (TG)n Simple_repeat Simple_repeat 1 242 0 3 1359 374 257 14 0 chr15 101541482 101541556 -1953418 + ID4 SINE ID 6 80 -3 3 1359 221 325 0 0 chr15 101542867 101542990 -1951984 + (CCA)n Simple_repeat Simple_repeat 1 123 0 3 1359 531 0 0 0 chr15 101545204 101545263 -1949711 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1359 477 0 0 0 chr15 101546691 101546744 -1948230 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 1359 348 360 0 6 chr15 101546866 101547028 -1947946 + (TG)n Simple_repeat Simple_repeat 2 162 0 4 1359 232 290 0 0 chr15 101547054 101547116 -1947858 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 1359 252 0 0 0 chr15 101547146 101547174 -1947800 + (GA)n Simple_repeat Simple_repeat 2 29 0 4 1359 369 141 0 0 chr15 101547260 101547331 -1947643 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 1359 1281 124 42 28 chr15 101548788 101549003 -1945971 - URR1A DNA MER1_type 0 226 9 4 1359 790 317 78 67 chr15 101549208 101549381 -1945593 + MLT2B3 LTR ERVL 3 182 -372 4 1359 2184 150 67 26 chr15 101549381 101549772 -1945202 - MTB_Mm LTR MaLR 0 407 1 4 1359 790 317 78 67 chr15 101549772 101550058 -1944916 + MLT2B3 LTR ERVL 183 466 -88 4 1359 259 323 20 0 chr15 101550091 101550190 -1944784 + (TATATG)n Simple_repeat Simple_repeat 4 104 0 4 1359 366 23 0 0 chr15 101550197 101550240 -1944734 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1359 484 247 5 60 chr15 101550877 101551113 -1943861 + C-rich Low_complexity Low_complexity 1 223 0 5 1359 218 282 64 0 chr15 101551267 101551345 -1943629 - MIR SINE MIR -60 202 120 5 1359 207 0 0 0 chr15 101552106 101552129 -1942845 + (CTG)n Simple_repeat Simple_repeat 1 23 0 5 1359 239 308 14 110 chr15 101552160 101552306 -1942668 - MamRep1879 DNA hAT? -53 163 32 5 1359 938 309 68 58 chr15 101552991 101553476 -1941498 + MLT1D LTR MaLR 3 492 -13 5 1359 567 0 0 0 chr15 101553593 101553656 -1941318 + (TC)n Simple_repeat Simple_repeat 2 64 0 5 1359 506 363 59 48 chr15 101556369 101556641 -1938333 + MER63D DNA AcHobo 161 435 -1 5 1359 504 310 89 69 chr15 101556641 101556735 -1938239 + MER33 DNA MER1_type 27 116 -208 5 1359 1613 208 101 21 chr15 101556735 101557123 -1937851 + MTD LTR MaLR 1 419 0 5 1359 504 310 89 69 chr15 101557123 101557314 -1937660 + MER33 DNA MER1_type 117 318 -6 5 1359 299 335 112 0 chr15 101557335 101557487 -1937487 + MER63D DNA AcHobo 424 592 -469 5 1359 243 308 8 108 chr15 101557563 101557683 -1937291 - MER47B DNA MER2_type -173 245 138 5 1359 417 300 89 62 chr15 101557690 101558028 -1936946 - ORR1E LTR MaLR -5 354 8 6 1359 237 292 72 10 chr15 101558035 101558132 -1936842 - MER47B DNA MER2_type -275 143 41 5 1359 499 260 23 23 chr15 101559063 101559240 -1935734 - HAL1-2a_MD LINE L1 -502 2522 2346 6 1359 582 220 0 0 chr15 101561033 101561210 -1933764 + (CA)n Simple_repeat Simple_repeat 1 177 0 6 1359 700 169 0 33 chr15 101561256 101561440 -1933534 + (CA)n Simple_repeat Simple_repeat 2 179 0 6 1359 695 116 9 0 chr15 101562588 101562700 -1932274 + (TTCC)n Simple_repeat Simple_repeat 3 115 0 6 1359 278 238 93 70 chr15 101562704 101562790 -1932184 - PB1 SINE Alu 0 120 33 6 1359 841 101 5 43 chr15 101562808 101562994 -1931980 + (TG)n Simple_repeat Simple_repeat 2 180 0 6 1359 393 188 107 68 chr15 101563014 101563098 -1931876 - B4A SINE B4 0 292 199 6 1359 786 174 205 102 chr15 101563098 101563303 -1931671 - URR1A DNA MER1_type 0 226 1 6 1359 393 188 107 68 chr15 101563303 101563321 -1931653 - B4A SINE B4 -94 198 186 6 1359 252 0 0 0 chr15 101563744 101563772 -1931202 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 1359 195 283 160 40 chr15 101565671 101565796 -1929178 + MIRc SINE MIR 2 141 -127 6 1359 414 0 0 0 chr15 101566253 101566299 -1928675 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 7 1359 993 80 43 14 chr15 101566299 101566432 -1928542 - B1_Mus2 SINE Alu -8 139 1 7 1359 474 265 179 16 chr15 101566753 101566937 -1928037 - ID_B1 SINE B4 -7 217 4 7 1359 230 367 10 39 chr15 101567624 101567726 -1927248 - MIRb SINE MIR -8 260 162 7 1359 2569 123 46 15 chr15 101570140 101570535 -1924439 + MTB_Mm LTR MaLR 1 407 0 7 1359 234 374 58 6 chr15 101572341 101572497 -1922477 - MIR SINE MIR -6 256 93 7 1359 2572 86 8 6 chr15 101577705 101578067 -1916907 + Lx2 LINE L1 6281 6643 -354 7 1359 1457 113 0 5 chr15 101578067 101578280 -1916694 + Lx2 LINE L1 6775 6986 -11 7 1359 200 409 93 7 chr15 101578997 101579147 -1915827 + MIRc SINE MIR 31 193 -75 7 1359 586 318 23 0 chr15 101579190 101579363 -1915611 - MIR SINE MIR -5 257 81 7 1359 214 343 50 20 chr15 101579730 101579831 -1915143 - L2c LINE L2 -8 3379 3276 7 1359 986 275 43 21 chr15 101579898 101580110 -1914864 + B4A SINE B4 3 210 -82 8 1359 641 13 13 0 chr15 101580110 101580188 -1914786 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 8 1359 986 275 43 21 chr15 101580188 101580257 -1914717 + B4A SINE B4 211 288 -4 8 1359 315 0 0 0 chr15 101580280 101580315 -1914659 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 169 544 242 43 53 chr15 101580740 101580962 -1914012 - L1MB5 LINE L1 -8 6166 5906 8 1360 648 152 0 0 chr15 101580970 101581102 -1913872 + CT-rich Low_complexity Low_complexity 2 133 0 8 1360 576 141 17 52 chr15 101581105 101581338 -1913636 + (TCTCTG)n Simple_repeat Simple_repeat 1 224 0 8 1360 630 306 119 78 chr15 101581361 101581624 -1913350 - L1MB5 LINE L1 -291 5883 5608 8 1360 825 255 33 28 chr15 101581624 101581838 -1913136 - B3 SINE B2 -1 215 1 8 1360 630 306 119 78 chr15 101581838 101581873 -1913101 - L1MB5 LINE L1 -567 5607 5537 8 1360 800 211 0 13 chr15 101581873 101582022 -1912952 + B1_Mur3 SINE Alu 3 149 0 8 1360 630 306 119 78 chr15 101582022 101582253 -1912721 - L1MB5 LINE L1 -638 5536 5317 8 1360 823 233 36 21 chr15 101582253 101582446 -1912528 - B3A SINE B2 -2 196 1 8 1360 630 260 13 103 chr15 101582446 101582580 -1912394 - L1MB5 LINE L1 -858 5316 5191 8 1360 380 198 128 10 chr15 101582599 101582701 -1912273 - PB1D10 SINE Alu 0 117 4 8 1360 694 282 22 59 chr15 101582905 101583176 -1911798 + RMER15 LTR ERVL 299 559 -16 9 1360 267 309 19 67 chr15 101583193 101583297 -1911677 + MT2B2 LTR ERVL 155 253 -331 9 1360 467 164 220 17 chr15 101583214 101583332 -1911642 + B1F SINE Alu 8 149 0 9 1360 263 326 30 22 chr15 101583415 101583550 -1911424 - L1MB5 LINE L1 -1070 5076 4941 8 1360 479 162 0 0 chr15 101585616 101585690 -1909284 + PB1D7 SINE Alu 35 108 -12 9 1360 7983 47 0 0 chr15 101585806 101586802 -1908172 - L1Md_T LINE L1 0 6582 5587 9 1360 910 244 171 11 chr15 101587296 101587590 -1907384 + MTE2b LTR MaLR 13 353 -26 9 1360 429 276 163 70 chr15 101587716 101587973 -1907001 + B4A SINE B4 2 282 -10 9 1360 211 182 0 0 chr15 101587993 101588026 -1906948 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1360 522 0 0 0 chr15 101588664 101588722 -1906252 + (CA)n Simple_repeat Simple_repeat 2 59 0 9 1360 530 291 83 94 chr15 101592014 101592375 -1902599 + ORR1E LTR MaLR 1 357 -2 9 1360 234 0 0 0 chr15 101593231 101593257 -1901717 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1360 405 0 0 0 chr15 101593393 101593438 -1901536 + (TCCA)n Simple_repeat Simple_repeat 4 48 0 1 1360 343 70 0 0 chr15 101595579 101595622 -1899352 - L1_Mus1 LINE L1 -388 6179 6137 1 1360 3067 50 5 8 chr15 101595622 101596002 -1898972 + L1_Mus1 LINE L1 6189 6567 0 1 1360 477 0 0 0 chr15 101596088 101596141 -1898833 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1360 225 293 112 45 chr15 101596302 101596419 -1898555 - MIRb SINE MIR -50 158 41 1 1360 987 280 139 42 chr15 101596955 101597428 -1897546 + Lx8 LINE L1 6953 7471 -2 1 1360 225 65 0 0 chr15 101598179 101598210 -1896764 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1360 3158 47 37 3 chr15 101598314 101598697 -1896277 + MTA_Mm LTR MaLR 1 396 0 1 1360 1720 123 0 22 chr15 101599018 101599292 -1895682 + MTB_Mm LTR MaLR 1 268 -139 1 1360 523 275 38 0 chr15 101603499 101603630 -1891344 + B1F1 SINE Alu 5 140 -9 1 1360 193 273 112 11 chr15 101604244 101604333 -1890641 - L4 LINE RTE -209 1820 1723 1 1360 229 326 114 23 chr15 101605354 101605530 -1889444 + L2a LINE L2 3191 3382 -44 1 1360 261 207 97 65 chr15 101606152 101606245 -1888729 + MLT1A1 LTR MaLR 267 362 -46 1 1360 610 289 133 40 chr15 101606230 101606554 -1888420 - ORR1E LTR MaLR -5 354 1 1 1360 447 113 0 0 chr15 101607217 101607288 -1887686 + (TC)n Simple_repeat Simple_repeat 2 72 0 1 1360 256 292 0 0 chr15 101607288 101607360 -1887614 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 1360 580 163 5 58 chr15 101607377 101607566 -1887408 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 1360 3212 19 67 8 chr15 101609162 101609536 -1885438 + MTA_Mm LTR MaLR 1 396 0 1 1360 281 329 0 0 chr15 101611181 101611266 -1883708 + (CA)n Simple_repeat Simple_repeat 1 85 0 1 1360 328 321 160 59 chr15 101612681 101613125 -1881849 + Charlie2a DNA MER1_type 35 523 -2338 1 1360 375 331 72 133 chr15 101613180 101613338 -1881636 + Charlie2a DNA MER1_type 624 783 -2078 1 1360 374 232 0 0 chr15 101613338 101613407 -1881567 + ID4 SINE ID 1 69 -14 1 1360 375 331 72 133 chr15 101613407 101613791 -1881183 + Charlie2a DNA MER1_type 784 1133 -1728 1 1360 440 128 13 0 chr15 101613905 101613983 -1880991 + (TTTC)n Simple_repeat Simple_repeat 3 81 0 1 1360 554 198 171 16 chr15 101613985 101614108 -1880866 - B1_Mur2 SINE Alu -7 142 1 1 1360 282 301 43 10 chr15 101614157 101614260 -1880714 - MIR SINE MIR -113 155 32 1 1360 1710 15 0 0 chr15 101618378 101618573 -1876401 - L1Md_A LINE L1 0 6582 6388 1 1360 186 128 0 0 chr15 101618647 101618686 -1876288 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1360 681 332 28 18 chr15 101618816 101619098 -1875876 + B4A SINE B4 8 292 0 1 1360 407 288 60 27 chr15 101619160 101619310 -1875664 + L1MC1 LINE L1 6166 6320 -13 1 1360 871 129 13 91 chr15 101619319 101619473 -1875501 + B1_Mur3 SINE Alu 1 142 -7 1 1360 494 277 70 37 chr15 101619901 101620145 -1874829 + RLTR42-int LTR ERVK 1147 1398 -4124 1 1360 262 292 14 0 chr15 101621129 101621201 -1873773 + MLT1J1 LTR MaLR 356 428 -16 1 1360 270 333 58 43 chr15 101621370 101621508 -1873466 - MIR SINE MIR -12 250 111 1 1360 362 308 17 17 chr15 101622070 101622189 -1872785 + L1MC1 LINE L1 6029 6147 -186 1 1360 1135 237 144 30 chr15 101622260 101622599 -1872375 + MTEa LTR MaLR 2 379 0 1 1360 23 33 0 0 chr15 101623738 101623768 -1871206 + AT_rich Low_complexity Low_complexity 1 30 0 1 1360 292 227 15 29 chr15 101631902 101631970 -1863004 - MER5A DNA MER1_type -4 185 119 1 1360 2860 237 72 17 chr15 101634286 101635663 -1859311 + Lx6 LINE L1 5747 7432 -28 1 1360 376 203 34 28 chr15 101635680 101635857 -1859117 + GA-rich Low_complexity Low_complexity 3 180 0 1 1360 377 297 184 64 chr15 101635903 101636048 -1858926 + Lx8 LINE L1 7176 7342 -131 1 1360 297 0 0 0 chr15 101636048 101636081 -1858893 + (CATA)n Simple_repeat Simple_repeat 3 35 0 1 1360 377 297 184 64 chr15 101636081 101636201 -1858773 + Lx8 LINE L1 7343 7473 0 1 1360 425 252 48 0 chr15 101636216 101636319 -1858655 + RSINE1 SINE B4 8 115 -50 1 1360 405 0 0 0 chr15 101636319 101636364 -1858610 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1360 645 238 125 0 chr15 101636484 101636652 -1858322 + B3 SINE B2 23 211 -5 1 1360 319 315 23 23 chr15 101636656 101636789 -1858185 - MIRb SINE MIR -78 190 58 1 1360 390 240 238 6 chr15 101637039 101637211 -1857763 - L1MD LINE L1 -1898 4248 4037 1 1360 547 166 13 33 chr15 101637249 101637370 -1857604 + CT-rich Low_complexity Low_complexity 29 147 0 1 1360 1063 73 5 48 chr15 101637370 101637558 -1857416 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 1 1360 547 166 13 33 chr15 101637558 101637586 -1857388 + polypyrimidine Low_complexity Low_complexity 1 28 0 1 1360 279 312 0 0 chr15 101637596 101637692 -1857282 - L1M5 LINE L1 -2353 3793 3698 1 1360 269 141 14 0 chr15 101637717 101637788 -1857186 + (TTTG)n Simple_repeat Simple_repeat 2 73 0 1 1360 252 247 55 0 chr15 101637814 101637887 -1857087 - L1M5 LINE L1 -2510 3636 3560 1 1360 193 316 89 57 chr15 101637980 101638138 -1856836 - MIRm SINE MIR -25 251 89 1 1360 3987 13 0 0 chr15 101638333 101638803 -1856171 + L1Md_A LINE L1 5117 5586 -297 1 1360 9042 11 0 0 chr15 101638803 101639834 -1855140 + L1Md_A LINE L1 5587 6582 0 1 1360 251 379 0 6 chr15 101640118 101640293 -1854681 + (CA)n Simple_repeat Simple_repeat 1 174 0 1 1360 237 33 0 0 chr15 101641978 101642008 -1852966 + (TCC)n Simple_repeat Simple_repeat 1 30 0 1 1360 332 314 148 0 chr15 101642837 101643060 -1851914 + RMER1C Other Other 519 774 -568 1 1360 585 0 0 0 chr15 101644297 101644362 -1850612 + (GA)n Simple_repeat Simple_repeat 1 65 0 1 1360 315 0 0 0 chr15 101646672 101646707 -1848267 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1360 318 307 138 22 chr15 101649562 101649711 -1845263 + MIRc SINE MIR 3 167 -41 1 1360 1182 68 7 0 chr15 101649745 101649891 -1845083 - B1_Mus1 SINE Alu 0 148 2 1 1360 187 118 54 81 chr15 101650076 101650113 -1844861 + MIR3 SINE MIR 120 155 -53 1 1360 734 169 6 27 chr15 101650121 101650274 -1844700 + GA-rich Low_complexity Low_complexity 2 152 0 1 1360 1518 22 0 0 chr15 101650274 101650452 -1844522 + (GAA)n Simple_repeat Simple_repeat 3 180 0 1 1360 734 169 6 27 chr15 101650452 101650481 -1844493 + polypurine Low_complexity Low_complexity 153 180 0 1 1360 192 152 0 0 chr15 101651975 101652008 -1842966 + CT-rich Low_complexity Low_complexity 3 35 0 1 1360 978 172 0 3 chr15 101652774 101653103 -1841871 + (TG)n Simple_repeat Simple_repeat 1 327 0 1 1360 324 356 0 0 chr15 101653116 101653203 -1841771 - B1_Mm SINE Alu -60 87 1 1 1360 255 304 62 75 chr15 101654386 101654532 -1840442 + MIR3 SINE MIR 18 161 -47 1 1360 880 202 0 12 chr15 101655528 101655954 -1839020 + (TG)n Simple_repeat Simple_repeat 1 420 0 1 1360 414 39 0 0 chr15 101657242 101657294 -1837680 + (TGAA)n Simple_repeat Simple_repeat 4 55 0 1 1360 315 0 0 0 chr15 101658410 101658445 -1836529 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1360 670 236 13 45 chr15 101658468 101658623 -1836351 - B3A SINE B2 -46 152 3 1 1360 779 294 55 8 chr15 101659236 101659490 -1835484 - Lx6 LINE L1 -188 7272 7007 1 1360 412 245 104 19 chr15 101659514 101659668 -1835306 + Lx6 LINE L1 7290 7456 -4 1 1360 209 108 27 0 chr15 101659749 101659786 -1835188 + (CAAAAA)n Simple_repeat Simple_repeat 4 41 0 1 1360 213 267 79 13 chr15 101661447 101661523 -1833451 - L2c LINE L2 -49 3338 3258 1 1360 438 354 45 17 chr15 101661553 101661731 -1833243 - MER63A DNA AcHobo -3 207 25 1 1360 389 307 62 33 chr15 101662232 101662443 -1832531 + B4A SINE B4 1 266 -26 1 1360 288 0 0 0 chr15 101662445 101662477 -1832497 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1360 381 157 0 28 chr15 101663017 101663089 -1831885 - HAL1-3A_ME LINE L1 -813 2045 1976 1 1360 332 258 4 0 chr15 101663089 101663329 -1831645 + (TG)n Simple_repeat Simple_repeat 1 241 0 1 1360 343 83 0 40 chr15 101663392 101663442 -1831532 - HAL1-3A_ME LINE L1 -846 2012 1965 1 1360 994 247 5 36 chr15 101664129 101664352 -1830622 - B3 SINE B2 0 216 1 1 1360 250 245 115 86 chr15 101664406 101664511 -1830463 - PB1D9 SINE Alu -17 132 25 1 1360 1026 266 0 5 chr15 101664933 101665148 -1829826 - B3 SINE B2 -2 214 1 1 1360 411 56 0 0 chr15 101666104 101666158 -1828816 + (GTTTG)n Simple_repeat Simple_repeat 2 55 0 1 1360 405 0 0 0 chr15 101666397 101666442 -1828532 + (TC)n Simple_repeat Simple_repeat 1 45 0 1 1360 351 113 0 0 chr15 101666442 101666494 -1828480 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1360 243 0 0 0 chr15 101666729 101666756 -1828218 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 1360 381 252 202 54 chr15 101666937 101667214 -1827760 + Lx8 LINE L1 7156 7473 0 1 1360 642 243 58 14 chr15 101667450 101667588 -1827386 + B1F SINE Alu 4 147 -2 1 1360 183 80 0 0 chr15 101667661 101667686 -1827288 + (TGG)n Simple_repeat Simple_repeat 1 25 0 1 1360 371 38 19 0 chr15 101667704 101667757 -1827217 + (TTG)n Simple_repeat Simple_repeat 2 55 0 1 1360 296 247 11 90 chr15 101667762 101667851 -1827123 - ID4_ SINE ID 0 83 2 1 1360 1353 40 0 0 chr15 101667858 101668034 -1826940 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 1 1360 504 0 0 0 chr15 101668034 101668090 -1826884 + (CATA)n Simple_repeat Simple_repeat 1 56 0 1 1360 196 175 169 31 chr15 101670191 101670256 -1824718 + L2b LINE L2 3249 3322 -53 1 1360 1128 226 77 53 chr15 101671244 101671529 -1823445 + B4A SINE B4 1 292 0 1 1360 557 180 18 26 chr15 101671530 101671814 -1823160 + (CA)n Simple_repeat Simple_repeat 1 281 0 1 1360 240 269 15 0 chr15 101672325 101672392 -1822582 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 1360 973 201 80 87 chr15 101672400 101672648 -1822326 - B4A SINE B4 -2 290 44 1 1360 306 0 0 0 chr15 101672648 101672682 -1822292 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1360 973 201 80 87 chr15 101672682 101672722 -1822252 - B4A SINE B4 -249 43 4 1 1360 1165 204 55 32 chr15 101672722 101673205 -1821769 + RMER17C LTR ERVK 45 410 0 2 1360 362 283 20 10 chr15 101674244 101674344 -1820630 + HAL1-2a_MD LINE L1 2385 2485 -539 2 1360 1058 173 10 60 chr15 101674850 101675151 -1819823 - RMER17C LTR ERVK -41 369 84 2 1360 537 132 59 12 chr15 101675160 101675329 -1819645 + GA-rich Low_complexity Low_complexity 1 177 0 2 1360 807 153 11 90 chr15 101675329 101675629 -1819345 - RMER17C LTR ERVK -519 439 16 2 1360 339 264 0 0 chr15 101676499 101676666 -1818308 + (CCG)n Simple_repeat Simple_repeat 2 168 0 2 1360 228 130 0 0 chr15 101680720 101680766 -1814208 + (CCA)n Simple_repeat Simple_repeat 1 46 0 2 1360 320 333 0 0 chr15 101680795 101680912 -1814062 + (CCG)n Simple_repeat Simple_repeat 2 118 0 2 1360 357 125 0 0 chr15 101683301 101683357 -1811617 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1360 819 0 0 0 chr15 101684529 101684620 -1810354 + (GGA)n Simple_repeat Simple_repeat 2 92 0 2 1360 308 275 82 9 chr15 101685379 101685489 -1809485 + MIRb SINE MIR 78 195 -73 2 1360 23 0 0 0 chr15 101688645 101688668 -1806306 + AT_rich Low_complexity Low_complexity 1 23 0 2 1360 742 247 47 29 chr15 101688720 101688891 -1806083 + B4 SINE B4 39 212 -80 2 1360 243 177 0 0 chr15 101690403 101690465 -1804509 + (CCG)n Simple_repeat Simple_repeat 3 64 0 2 1360 300 217 0 48 chr15 101691930 101691993 -1802981 + HAL1-3A_ME LINE L1 1968 2027 -831 2 1360 428 301 11 28 chr15 101691994 101692175 -1802799 + (CA)n Simple_repeat Simple_repeat 2 179 0 2 1360 225 271 79 45 chr15 101692211 101692300 -1802674 - RLTR13D6 LTR ERVK -790 112 21 2 1360 31 0 0 0 chr15 101695294 101695325 -1799649 + AT_rich Low_complexity Low_complexity 1 31 0 2 1360 334 259 80 50 chr15 101695459 101695615 -1799359 + MER5A DNA MER1_type 3 164 -2 2 1360 273 167 0 0 chr15 101696800 101696854 -1798120 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1360 350 306 17 23 chr15 101696860 101697034 -1797940 + (CATATA)n Simple_repeat Simple_repeat 1 173 0 2 1360 225 289 204 34 chr15 101697498 101697645 -1797329 - L2 LINE L2 -531 2888 2717 2 1360 182 185 107 36 chr15 101698709 101698765 -1796209 + MIRm SINE MIR 216 275 -1 2 1360 496 166 36 0 chr15 101698788 101698927 -1796047 + (TGGA)n Simple_repeat Simple_repeat 3 146 0 2 1360 447 149 50 0 chr15 101698943 101699064 -1795910 + (TGGA)n Simple_repeat Simple_repeat 3 129 0 2 1360 204 275 0 0 chr15 101699678 101699747 -1795227 + (CCA)n Simple_repeat Simple_repeat 1 69 0 2 1360 242 196 0 0 chr15 101699750 101699801 -1795173 + CT-rich Low_complexity Low_complexity 3 53 0 2 1360 216 0 0 0 chr15 101700573 101700597 -1794377 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 1360 361 275 32 95 chr15 101700689 101700910 -1794064 - MER5C DNA MER1_type -36 277 71 2 1360 246 303 45 42 chr15 101701573 101701735 -1793239 + MIRc SINE MIR 3 146 -62 2 1360 859 282 38 0 chr15 101704233 101704442 -1790532 - B4A SINE B4 -73 219 3 2 1360 917 237 23 14 chr15 101704447 101704661 -1790313 - ID_B1 SINE B4 -6 218 3 2 1360 346 383 80 15 chr15 101704801 101705000 -1789974 + MIR SINE MIR 29 240 -22 2 1360 300 308 0 13 chr15 101705349 101705428 -1789546 + PB1D10 SINE Alu 28 105 -12 2 1360 231 250 91 152 chr15 101705998 101706013 -1788961 - PB1D10 SINE Alu -7 110 18 2 1360 337 247 131 36 chr15 101706013 101706097 -1788877 - ID_B1 SINE B4 -34 190 99 2 1360 502 219 49 32 chr15 101706113 101706236 -1788738 - B3A SINE B2 -73 125 1 2 1360 550 190 49 42 chr15 101706306 101706449 -1788525 - L1M2 LINE L1 -636 5676 5533 2 1360 422 222 69 0 chr15 101706454 101706598 -1788376 + L1M2 LINE L1 5388 5541 -630 2 1360 1646 113 16 16 chr15 101707030 101707282 -1787692 + MTC LTR MaLR 170 421 0 2 1360 575 241 43 43 chr15 101707594 101707733 -1787241 + ID_B1 SINE B4 83 221 -3 2 1360 1038 151 89 21 chr15 101708932 101709148 -1785826 - RMER13A LTR ERVK -643 265 1 2 1360 21 0 0 0 chr15 101709506 101709527 -1785447 + AT_rich Low_complexity Low_complexity 1 21 0 2 1360 22 35 0 0 chr15 101709546 101709575 -1785399 + AT_rich Low_complexity Low_complexity 1 29 0 2 1360 479 216 213 15 chr15 101709656 101709792 -1785182 + RSINE1 SINE B4 3 165 0 2 1360 25 51 0 0 chr15 101709792 101709831 -1785143 + AT_rich Low_complexity Low_complexity 1 39 0 2 1360 180 0 0 0 chr15 101710175 101710195 -1784779 + (CAG)n Simple_repeat Simple_repeat 1 20 0 2 1360 207 262 0 0 chr15 101710278 101710320 -1784654 + (CACG)n Simple_repeat Simple_repeat 2 43 0 2 1360 339 182 0 0 chr15 101710320 101710375 -1784599 + HAL1-3A_ME LINE L1 1976 2030 -828 2 1360 379 216 134 0 chr15 101710973 101711070 -1783904 + RSINE1 SINE B4 5 114 -51 2 1360 254 314 58 11 chr15 101711276 101711363 -1783611 + MIR SINE MIR 88 178 -84 2 1360 423 0 0 0 chr15 101711574 101711621 -1783353 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1361 250 342 129 81 chr15 101712487 101712697 -1782277 - LTR16A LTR ERVL -15 436 217 2 1361 204 250 19 0 chr15 101712926 101712978 -1781996 + (TATG)n Simple_repeat Simple_repeat 4 56 0 2 1361 538 332 148 8 chr15 101712978 101713221 -1781753 - RMER15 LTR ERVL 0 575 299 2 1361 387 0 0 0 chr15 101714014 101714057 -1780917 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1361 366 162 0 0 chr15 101715410 101715484 -1779490 + (CTG)n Simple_repeat Simple_repeat 2 75 0 2 1361 287 269 146 18 chr15 101716005 101716115 -1778859 - B4A SINE B4 -168 124 1 2 1361 313 271 146 0 chr15 101717129 101717225 -1777749 - MER3 DNA MER1_type -8 201 92 2 1361 331 295 26 18 chr15 101717231 101717345 -1777629 + PB1D10 SINE Alu 1 115 -2 2 1361 443 0 0 50 chr15 101719575 101719635 -1775339 + (TC)n Simple_repeat Simple_repeat 1 57 0 2 1361 601 283 12 81 chr15 101720022 101720195 -1774779 + B3 SINE B2 6 166 -29 2 1361 315 0 0 0 chr15 101720218 101720253 -1774721 + (CATA)n Simple_repeat Simple_repeat 4 38 0 2 1361 2150 79 0 3 chr15 101721273 101721566 -1773408 - Lx3_Mus LINE L1 -171 6838 6547 2 1361 714 146 35 7 chr15 101721567 101721712 -1773262 + Lx3_Mus LINE L1 6838 6986 -23 2 1361 234 0 0 0 chr15 101721712 101721738 -1773236 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 2 1361 1070 58 73 0 chr15 101721752 101721889 -1773085 + B1_Mm SINE Alu 1 147 0 2 1361 242 312 0 0 chr15 101721889 101721972 -1773002 + A-rich Low_complexity Low_complexity 10 92 0 2 1361 2641 157 99 50 chr15 101724225 101724783 -1770191 + RMER4B LTR ERVK 1 585 0 2 1361 738 205 64 16 chr15 101725129 101725317 -1769657 - RCHARR1 DNA MER1_type -7 967 771 2 1361 414 0 0 0 chr15 101725317 101725363 -1769611 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 1361 2751 244 61 6 chr15 101725363 101726048 -1768926 - RCHARR1 DNA MER1_type -244 730 8 2 1361 514 308 81 0 chr15 101726427 101726599 -1768375 + MIR SINE MIR 44 229 -33 2 1361 302 237 0 0 chr15 101726603 101726662 -1768312 + RSINE1 SINE B4 15 73 -92 2 1361 1951 167 30 61 chr15 101727442 101727837 -1767137 + RLTR12A LTR ERVK 1 383 -185 2 1361 1940 95 10 26 chr15 101727847 101728160 -1766814 - RLTR15 LTR ERVK -51 308 1 2 1361 287 360 26 4 chr15 101729793 101729955 -1765019 + MIR SINE MIR 17 182 -94 2 1361 402 295 34 48 chr15 101730132 101730278 -1764696 + B1_Mur3 SINE Alu 1 144 -5 2 1361 581 261 75 47 chr15 101730514 101730727 -1764247 + ID_B1 SINE B4 5 223 -1 2 1361 860 229 29 5 chr15 101730784 101730990 -1763984 + B3 SINE B2 3 213 -3 2 1361 282 325 86 7 chr15 101731013 101731165 -1763809 - MIRb SINE MIR -2 266 103 2 1361 705 70 0 0 chr15 101731437 101731537 -1763437 + (CA)n Simple_repeat Simple_repeat 2 101 0 2 1361 335 225 306 0 chr15 101731938 101732049 -1762925 + B3 SINE B2 1 145 -71 2 1361 519 17 0 0 chr15 101732050 101732110 -1762864 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 1361 449 222 80 152 chr15 101732110 101732239 -1762735 + B3A SINE B2 56 181 -17 2 1361 198 0 0 0 chr15 101732239 101732261 -1762713 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 2 1361 485 258 16 16 chr15 101732300 101732426 -1762548 + B1F SINE Alu 1 126 -23 2 1361 360 0 0 0 chr15 101733282 101733322 -1761652 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1361 1961 196 16 196 chr15 101736172 101736915 -1758059 - RMER19C LTR ERVK -1 610 2 2 1361 246 62 0 0 chr15 101737568 101737600 -1757374 + (CTG)n Simple_repeat Simple_repeat 1 32 0 2 1361 554 214 9 9 chr15 101737861 101737974 -1757000 - PB1D9 SINE Alu -1 119 7 2 1361 2240 86 6 27 chr15 101738046 101738379 -1756595 + ORR1A2 LTR MaLR 1 326 -1 2 1361 288 245 9 138 chr15 101738435 101738544 -1756430 + MER81 DNA AcHobo 1 95 -19 2 1361 353 237 13 0 chr15 101741599 101741675 -1753299 + PB1D10 SINE Alu 35 111 -6 2 1361 492 274 4 15 chr15 101741678 101741944 -1753030 + GA-rich Low_complexity Low_complexity 1 262 0 2 1361 756 143 0 0 chr15 101741936 101742062 -1752912 + (GAAAA)n Simple_repeat Simple_repeat 3 128 0 2 1361 1089 63 7 0 chr15 101742129 101742272 -1752702 + B1_Mus2 SINE Alu 2 145 -2 2 1361 807 246 17 6 chr15 101742294 101742474 -1752500 + B3 SINE B2 29 210 -6 2 1361 196 269 91 16 chr15 101742692 101742813 -1752161 - L2 LINE L2 -545 2874 2745 2 1361 186 43 0 0 chr15 101743106 101743129 -1751845 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 2 1361 8112 38 223 1 chr15 101743450 101745381 -1749593 - L1Md_F2 LINE L1 0 6582 4087 2 1361 209 257 81 0 chr15 101745808 101745882 -1749092 + L2c LINE L2 3084 3163 -224 2 1361 619 195 0 89 chr15 101746808 101746943 -1748031 + B1_Mus2 SINE Alu 20 142 -5 2 1361 222 287 110 39 chr15 101747258 101747385 -1747589 - B1F1 SINE Alu -2 147 12 2 1361 550 112 45 2 chr15 101750326 101750431 -1744543 + PB1D9 SINE Alu 1 107 -13 3 1361 248 271 0 0 chr15 101751761 101751820 -1743154 + GA-rich Low_complexity Low_complexity 1 59 0 3 1361 446 245 19 10 chr15 101753810 101753913 -1741061 + PB1D10 SINE Alu 2 105 -12 3 1361 196 333 57 64 chr15 101755502 101755643 -1739331 + MIR SINE MIR 25 164 -98 3 1361 225 332 21 51 chr15 101757228 101757373 -1737601 - MIRc SINE MIR -103 165 26 3 1361 209 313 96 0 chr15 101758723 101758846 -1736128 + MIR SINE MIR 8 150 -126 3 1361 594 97 39 24 chr15 101759406 101759533 -1735441 + G-rich Low_complexity Low_complexity 5 133 0 3 1361 327 262 37 9 chr15 101759567 101759675 -1735299 - MIRb SINE MIR -121 147 37 3 1361 225 250 0 16 chr15 101761718 101761779 -1733195 + MIRc SINE MIR 68 127 -141 3 1361 317 247 10 0 chr15 101763028 101763125 -1731849 + (CA)n Simple_repeat Simple_repeat 1 98 0 3 1361 395 335 121 28 chr15 101764230 101764445 -1730529 + B4A SINE B4 7 241 -51 3 1361 385 260 54 47 chr15 101764468 101764597 -1730377 - B1F SINE Alu -13 136 7 3 1361 262 316 52 10 chr15 101764526 101764622 -1730352 - B4A SINE B4 -126 166 67 3 1361 264 336 51 29 chr15 101764637 101764775 -1730199 + L3 LINE CR1 3455 3595 -894 3 1361 732 242 118 0 chr15 101764800 101764986 -1729988 + ID_B1 SINE B4 17 224 0 3 1361 28 29 0 0 chr15 101764990 101765025 -1729949 + AT_rich Low_complexity Low_complexity 1 35 0 3 1361 388 247 21 41 chr15 101765170 101765267 -1729707 + B1F1 SINE Alu 3 97 -52 3 1361 651 237 0 0 chr15 101765306 101765483 -1729491 + (CA)n Simple_repeat Simple_repeat 1 177 0 3 1361 222 352 37 0 chr15 101765780 101765888 -1729086 + L3 LINE CR1 4327 4438 -51 3 1361 201 343 93 19 chr15 101766096 101766203 -1728771 + MIRb SINE MIR 76 190 -78 3 1361 561 159 134 8 chr15 101766286 101766413 -1728561 - B1_Mur1 SINE Alu -5 144 2 3 1361 195 42 0 0 chr15 101767408 101767432 -1727542 + (TA)n Simple_repeat Simple_repeat 1 24 0 3 1361 24 0 0 0 chr15 101768047 101768071 -1726903 + AT_rich Low_complexity Low_complexity 1 24 0 3 1361 463 149 0 0 chr15 101768119 101768186 -1726788 + (CCCCCG)n Simple_repeat Simple_repeat 2 68 0 3 1361 459 0 0 0 chr15 101768568 101768619 -1726355 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1361 848 127 56 0 chr15 101768746 101768888 -1726086 + B1_Mur4 SINE Alu 1 150 0 3 1361 236 264 118 16 chr15 101768907 101769034 -1725940 + B3A SINE B2 59 198 0 3 1361 447 183 24 0 chr15 101769068 101769150 -1725824 + B3 SINE B2 9 92 -124 3 1361 195 269 38 25 chr15 101769332 101769412 -1725562 + MIRc SINE MIR 68 148 -120 3 1361 219 25 24 48 chr15 101770900 101770942 -1724032 + (CACCC)n Simple_repeat Simple_repeat 1 41 0 3 1361 362 256 13 0 chr15 101771405 101771483 -1723491 + ID_B1 SINE B4 82 160 -64 3 1361 196 236 30 119 chr15 101772198 101772299 -1722675 + MIR SINE MIR 35 126 -142 3 1361 206 293 0 0 chr15 101772627 101772685 -1722289 - L2b LINE L2 -18 3357 3300 3 1361 506 304 0 0 chr15 101772904 101773029 -1721945 - ID_B1 SINE B4 -23 201 77 3 1361 651 133 0 0 chr15 101774295 101774400 -1720574 + (CTG)n Simple_repeat Simple_repeat 3 107 0 3 1361 449 252 57 8 chr15 101774420 101774544 -1720430 - B1F SINE Alu -11 138 9 3 1361 357 207 0 0 chr15 101776327 101776414 -1718560 + (CA)n Simple_repeat Simple_repeat 2 88 0 3 1361 378 94 0 0 chr15 101779805 101779869 -1715105 + (CATA)n Simple_repeat Simple_repeat 1 64 0 3 1361 1023 198 6 0 chr15 101779884 101780061 -1714913 + B3 SINE B2 3 180 -36 3 1361 618 14 0 0 chr15 101780663 101780734 -1714240 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 1361 1379 252 121 29 chr15 101786073 101786526 -1708448 + Lx9 LINE L1 4871 5365 -482 3 1361 744 225 25 6 chr15 101786536 101786697 -1708277 + RSINE1 SINE B4 2 165 0 3 1361 183 162 0 0 chr15 101786703 101786740 -1708234 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1361 1305 104 4 8 chr15 101786741 101787274 -1707700 + (TAGA)n Simple_repeat Simple_repeat 1 530 0 3 1361 2456 304 93 47 chr15 101787274 101788936 -1706038 + Lx9 LINE L1 5660 7454 -190 3 1361 297 0 0 0 chr15 101788959 101788992 -1705982 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1361 845 102 0 0 chr15 101788993 101789111 -1705863 - B1_Mus2 SINE Alu -25 122 5 3 1361 906 92 0 0 chr15 101789734 101789886 -1705088 + (TG)n Simple_repeat Simple_repeat 1 152 0 3 1361 475 295 13 27 chr15 101789951 101790101 -1704873 - B1F SINE Alu 0 149 2 3 1361 398 336 55 0 chr15 101790222 101790368 -1704606 + RSINE1 SINE B4 12 165 0 3 1361 813 212 0 0 chr15 101790387 101790566 -1704408 + (CA)n Simple_repeat Simple_repeat 2 180 0 3 1361 197 237 0 17 chr15 101790569 101790629 -1704345 + (CATA)n Simple_repeat Simple_repeat 2 60 0 3 1361 297 0 0 0 chr15 101791041 101791074 -1703900 + (TTG)n Simple_repeat Simple_repeat 2 34 0 3 1361 215 237 0 39 chr15 101791084 101791146 -1703828 - MIRb SINE MIR -5 271 206 3 1361 439 324 138 40 chr15 101791250 101791649 -1703325 + L2a LINE L2 2989 3426 0 3 1361 401 318 35 23 chr15 101791803 101791977 -1702997 + (CATG)n Simple_repeat Simple_repeat 2 177 0 3 1361 336 111 0 0 chr15 101791984 101792038 -1702936 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1361 189 214 0 23 chr15 101792205 101792248 -1702726 - L3 LINE CR1 -953 3536 3495 3 1361 1716 140 21 54 chr15 101793128 101793461 -1701513 - RLTRETN_Mm LTR ERVK 0 322 1 3 1361 281 220 17 0 chr15 101794121 101794180 -1700794 + MLT1A1 LTR MaLR 293 352 -56 3 1361 206 139 28 0 chr15 101794192 101794228 -1700746 + GA-rich Low_complexity Low_complexity 3 39 0 3 1361 469 322 67 46 chr15 101794283 101794521 -1700453 - MIR SINE MIR -11 251 9 3 1361 507 148 0 0 chr15 101795279 101795367 -1699607 + (CAT)n Simple_repeat Simple_repeat 1 88 0 3 1361 267 155 103 0 chr15 101795374 101795432 -1699542 - PB1D10 SINE Alu -2 115 52 3 1361 529 216 8 8 chr15 101795401 101795518 -1699456 + B1_Mur3 SINE Alu 12 128 -21 3 1361 430 258 24 16 chr15 101797072 101797198 -1697776 - B1F SINE Alu 0 149 23 3 1361 729 187 208 6 chr15 101798054 101798237 -1696737 + ID_B1 SINE B4 2 221 -3 3 1361 690 261 0 0 chr15 101798268 101798410 -1696564 + B1_Mur1 SINE Alu 2 143 -6 3 1361 243 0 0 0 chr15 101798426 101798453 -1696521 + (TAA)n Simple_repeat Simple_repeat 1 27 0 3 1361 1488 69 37 0 chr15 101798459 101798647 -1696327 + B2_Mm2 SINE B2 1 195 0 3 1361 231 250 62 0 chr15 101799376 101799440 -1695534 - L3b LINE CR1 -193 289 222 3 1361 534 230 104 39 chr15 101799812 101799966 -1695008 + RSINE1 SINE B4 2 165 0 3 1361 261 0 0 0 chr15 101800014 101800043 -1694931 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1361 486 0 0 0 chr15 101800043 101800096 -1694878 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 1361 333 100 2 51 chr15 101800112 101800177 -1694797 - B2_Mm2 SINE B2 -107 109 47 3 1361 996 125 119 0 chr15 101800224 101800384 -1694590 - B2_Mm1t SINE B2 -14 179 1 3 1361 612 0 0 0 chr15 101800943 101801011 -1693963 + (TC)n Simple_repeat Simple_repeat 1 68 0 3 1361 260 389 49 29 chr15 101801447 101801651 -1693323 + MIRb SINE MIR 26 233 -35 3 1361 346 255 0 60 chr15 101801828 101801928 -1693046 + ID_B1 SINE B4 76 169 -55 3 1361 416 250 18 27 chr15 101801847 101801958 -1693016 + PB1D10 SINE Alu 8 117 0 3 1361 219 325 39 12 chr15 101802758 101802881 -1692093 - MIR SINE MIR -62 146 18 3 1361 196 277 92 0 chr15 101803848 101803913 -1691061 + MIRb SINE MIR 137 207 -61 3 1361 189 0 0 0 chr15 101808948 101808969 -1686005 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1361 872 278 8 30 chr15 101809132 101809369 -1685605 + B4A SINE B4 16 247 -45 3 1361 513 296 27 20 chr15 101809507 101809655 -1685319 + B4A SINE B4 126 274 -18 3 1361 214 29 57 0 chr15 101809661 101809696 -1685278 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1361 338 203 40 0 chr15 101809718 101809792 -1685182 + B4A SINE B4 216 292 0 3 1361 366 112 75 0 chr15 101809792 101809872 -1685102 + (CATA)n Simple_repeat Simple_repeat 3 88 0 3 1361 341 301 0 11 chr15 101809956 101810050 -1684924 + PB1D10 SINE Alu 1 93 -24 3 1361 225 108 0 0 chr15 101810050 101810087 -1684887 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1361 482 288 111 22 chr15 101810094 101810275 -1684699 + Charlie1a DNA MER1_type 657 853 -602 3 1361 593 204 29 0 chr15 101810297 101810434 -1684540 + B1F SINE Alu 9 149 0 3 1361 279 0 0 0 chr15 101810605 101810636 -1684338 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 1361 295 251 25 153 chr15 101810860 101811062 -1683912 - RLTR21 LTR ERVK -318 1254 1079 3 1361 396 0 0 0 chr15 101811304 101811348 -1683626 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1361 204 179 0 0 chr15 101812018 101812057 -1682917 + CT-rich Low_complexity Low_complexity 1 39 0 3 1361 519 250 0 0 chr15 101812093 101812273 -1682701 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1361 231 290 0 0 chr15 101812293 101812393 -1682581 + (CA)n Simple_repeat Simple_repeat 2 101 0 3 1361 551 237 6 0 chr15 101812408 101812585 -1682389 + (CA)n Simple_repeat Simple_repeat 1 178 0 3 1361 805 174 89 6 chr15 101812683 101812851 -1682123 + B3A SINE B2 1 182 -16 3 1361 192 179 0 0 chr15 101812854 101812893 -1682081 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1361 474 261 0 0 chr15 101812913 101813078 -1681896 + (CA)n Simple_repeat Simple_repeat 1 165 0 3 1361 192 125 0 0 chr15 101813078 101813110 -1681864 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1361 1230 54 0 0 chr15 101813111 101813259 -1681715 - B1_Mus1 SINE Alu 0 148 1 3 1361 408 293 0 0 chr15 101813606 101813770 -1681204 + (CA)n Simple_repeat Simple_repeat 1 164 0 3 1361 1044 69 0 0 chr15 101815246 101815390 -1679584 + B2_Mm2 SINE B2 2 145 -50 3 1361 802 155 274 0 chr15 101815773 101815941 -1679033 + B3 SINE B2 3 216 0 4 1361 23 0 0 0 chr15 101815941 101815964 -1679010 + AT_rich Low_complexity Low_complexity 1 23 0 4 1361 622 168 136 0 chr15 101816167 101816292 -1678682 - B1_Mur2 SINE Alu -7 142 1 4 1361 211 169 254 0 chr15 101816301 101816372 -1678602 - PB1D7 SINE Alu 0 120 32 4 1361 604 245 10 7 chr15 101816553 101816860 -1678114 + (TG)n Simple_repeat Simple_repeat 1 307 0 4 1361 537 216 29 243 chr15 101816860 101816977 -1677997 - B4A SINE B4 0 292 217 4 1361 611 245 45 26 chr15 101816977 101817132 -1677842 - RSINE1 SINE B4 -6 159 2 4 1361 537 216 29 243 chr15 101817132 101817253 -1677721 - B4A SINE B4 -76 216 105 4 1361 408 317 7 34 chr15 101817289 101817436 -1677538 - MER33 DNA MER1_type -181 143 1 4 1361 226 304 168 35 chr15 101817457 101817600 -1677374 - MER115 DNA Tip100 -427 266 105 4 1361 401 36 0 18 chr15 101817921 101817977 -1676997 + (TC)n Simple_repeat Simple_repeat 1 55 0 4 1361 225 0 0 0 chr15 101817988 101818013 -1676961 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 4 1361 269 119 0 33 chr15 101818077 101818138 -1676836 + T-rich Low_complexity Low_complexity 2 60 0 4 1361 468 239 61 9 chr15 101818144 101818258 -1676716 - PB1D9 SINE Alu 0 120 1 4 1361 1267 156 22 19 chr15 101818728 101818998 -1675976 - MTB_Mm LTR MaLR -136 285 1 4 1361 782 223 129 11 chr15 101819249 101819435 -1675539 + B3 SINE B2 1 208 -8 4 1361 188 135 27 0 chr15 101819494 101819531 -1675443 + CT-rich Low_complexity Low_complexity 1 38 0 4 1361 1416 123 62 0 chr15 101819692 101819935 -1675039 + MTB_Mm LTR MaLR 10 267 -140 4 1361 235 61 0 0 chr15 101819931 101819964 -1675010 + MTB_Mm LTR MaLR 385 417 -2 4 1361 273 57 0 0 chr15 101820266 101820301 -1674673 + (GGGA)n Simple_repeat Simple_repeat 1 35 0 4 1361 750 78 0 0 chr15 101820301 101820403 -1674571 + (GAAA)n Simple_repeat Simple_repeat 4 105 0 4 1361 424 132 0 0 chr15 101820405 101820473 -1674501 + RLTR11B LTR ERVK 67 134 -319 4 1361 788 113 0 0 chr15 101820473 101820588 -1674386 + B2_Mm2 SINE B2 1 115 -80 4 1361 667 275 92 58 chr15 101820614 101820678 -1674296 + RLTR11B LTR ERVK 118 233 -220 4 1361 872 106 28 0 chr15 101820678 101820820 -1674154 + B2_Mm2 SINE B2 50 195 0 4 1361 667 275 92 58 chr15 101820820 101820939 -1674035 + RLTR11B LTR ERVK 234 453 0 4 1361 1009 279 73 16 chr15 101821302 101821615 -1673359 - MTD LTR MaLR -86 333 3 4 1361 823 195 51 11 chr15 101821694 101821870 -1673104 + ID_B1 SINE B4 40 222 -2 4 1361 1369 216 122 6 chr15 101821878 101822214 -1672760 - MTD LTR MaLR -1 418 44 4 1361 315 324 133 11 chr15 101822329 101822364 -1672610 + ID_B1 SINE B4 1 120 -104 4 1361 346 252 32 40 chr15 101822364 101822399 -1672575 + MT2B LTR ERVL 135 168 -433 4 1361 607 177 106 0 chr15 101822399 101822512 -1672462 + B1_Mur3 SINE Alu 4 128 -21 4 1361 315 324 133 11 chr15 101822488 101822510 -1672464 + ID_B1 SINE B4 121 203 -21 4 1361 35 63 0 0 chr15 101823065 101823128 -1671846 + AT_rich Low_complexity Low_complexity 1 63 0 4 1361 1351 231 85 57 chr15 101823236 101823658 -1671316 + RMER10A LTR ERVL 1 434 -8 4 1361 287 25 0 24 chr15 101823852 101823893 -1671081 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 4 1361 274 124 70 55 chr15 101823956 101824084 -1670890 + (GTTTG)n Simple_repeat Simple_repeat 2 131 0 4 1361 386 227 82 0 chr15 101824087 101824184 -1670790 - PB1D10 SINE Alu -1 116 12 4 1361 343 331 69 34 chr15 101824202 101824377 -1670597 - MER2 DNA MER2_type -158 187 7 4 1361 200 34 0 33 chr15 101824442 101824472 -1670502 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 4 1361 467 94 271 0 chr15 101824474 101824559 -1670415 - ID_B1 SINE B4 -13 211 104 4 1361 280 267 0 72 chr15 101824487 101824584 -1670390 + YREP_Mm Unknown Unknown 230 319 -1493 4 1361 767 195 71 111 chr15 101824586 101824811 -1670163 + B3 SINE B2 1 216 0 4 1361 234 260 190 40 chr15 101825188 101825288 -1669686 + PB1D10 SINE Alu 3 117 0 4 1361 488 290 80 0 chr15 101825309 101825447 -1669527 + RSINE1 SINE B4 11 159 -6 4 1361 232 258 0 79 chr15 101826027 101826166 -1668808 + (TCCTG)n Simple_repeat Simple_repeat 3 130 0 4 1361 414 39 0 0 chr15 101826822 101826874 -1668100 + (TC)n Simple_repeat Simple_repeat 2 53 0 4 1361 614 297 37 16 chr15 101828602 101828790 -1666184 - ID_B1 SINE B4 -26 198 7 4 1361 342 0 0 0 chr15 101830087 101830125 -1664849 + (TTA)n Simple_repeat Simple_repeat 1 38 0 4 1361 747 154 16 0 chr15 101830166 101830289 -1664685 - B3 SINE B2 -89 127 3 4 1361 1572 48 21 0 chr15 101830301 101830489 -1664485 - B2_Mm1a SINE B2 0 193 2 4 1361 715 251 24 30 chr15 101830778 101830993 -1663981 - B3A SINE B2 -15 201 2 4 1361 189 0 0 0 chr15 101831501 101831522 -1663452 + (TC)n Simple_repeat Simple_repeat 1 21 0 4 1361 21 0 0 0 chr15 101831532 101831553 -1663421 + AT_rich Low_complexity Low_complexity 1 21 0 4 1361 380 250 104 19 chr15 101831553 101831659 -1663315 - B1F2 SINE Alu -21 128 14 4 1361 1197 41 0 0 chr15 101832107 101832254 -1662720 + (GGGA)n Simple_repeat Simple_repeat 2 148 0 4 1361 243 61 0 0 chr15 101833071 101833104 -1661870 + (TAA)n Simple_repeat Simple_repeat 1 33 0 4 1361 378 294 0 0 chr15 101835180 101835265 -1659709 + URR1A DNA MER1_type 5 89 -137 4 1361 363 106 0 0 chr15 101836552 101836618 -1658356 + (TCTG)n Simple_repeat Simple_repeat 1 66 0 4 1361 346 295 54 0 chr15 101837732 101837861 -1657113 + B1_Mus1 SINE Alu 1 136 -12 4 1361 213 114 0 0 chr15 101838230 101838265 -1656709 - ID4 SINE ID -46 37 3 4 1361 215 287 31 102 chr15 101838282 101838410 -1656564 - PB1 SINE Alu -5 122 4 4 1361 830 243 49 10 chr15 101838947 101839151 -1655823 + ID_B1 SINE B4 1 212 -12 4 1361 770 175 3 0 chr15 101839973 101840314 -1654660 + (TG)n Simple_repeat Simple_repeat 1 342 0 4 1361 351 259 30 121 chr15 101840388 101840428 -1654546 - RSINE1 SINE B4 -42 123 83 4 1361 215 31 31 0 chr15 101840428 101840460 -1654514 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 4 1361 351 259 30 121 chr15 101840460 101840551 -1654423 - RSINE1 SINE B4 -83 82 4 4 1361 375 60 0 0 chr15 101840705 101840755 -1654219 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1361 575 287 141 33 chr15 101841132 101841402 -1653572 - MLT1K LTR MaLR -295 300 2 4 1361 685 209 0 30 chr15 101841632 101841765 -1653209 - B1F SINE Alu -18 131 3 4 1361 202 106 0 60 chr15 101841845 101841895 -1653079 + A-rich Low_complexity Low_complexity 6 52 0 4 1361 559 178 29 10 chr15 101841915 101842017 -1652957 + B1_Mur2 SINE Alu 45 148 -1 4 1361 366 159 0 0 chr15 101842127 101842196 -1652778 + (TG)n Simple_repeat Simple_repeat 1 69 0 4 1361 246 297 0 0 chr15 101842327 101842391 -1652583 - ID4 SINE ID -16 67 4 4 1362 240 83 0 0 chr15 101843353 101843389 -1651585 + B1_Mus2 SINE Alu 96 131 -16 4 1362 237 233 117 0 chr15 101843874 101843934 -1651040 + ID4 SINE ID 3 69 -14 4 1362 405 123 0 0 chr15 101843961 101844026 -1650948 + (GA)n Simple_repeat Simple_repeat 1 65 0 4 1362 462 165 0 32 chr15 101845100 101845225 -1649749 + C-rich Low_complexity Low_complexity 2 122 0 4 1362 579 250 18 55 chr15 101845527 101845692 -1649282 + RSINE1 SINE B4 4 162 -3 4 1362 32 0 0 0 chr15 101845692 101845724 -1649250 + AT_rich Low_complexity Low_complexity 1 32 0 4 1362 472 190 16 49 chr15 101845724 101845846 -1649128 + PB1D9 SINE Alu 2 119 -1 4 1362 807 107 132 0 chr15 101846136 101846257 -1648717 + B1_Mus2 SINE Alu 5 141 -6 4 1362 371 175 25 0 chr15 101846383 101846463 -1648511 + CT-rich Low_complexity Low_complexity 4 85 0 4 1362 234 0 0 0 chr15 101847882 101847908 -1647066 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 4 1362 222 325 171 25 chr15 101847909 101848067 -1646907 - MIRb SINE MIR -71 197 17 4 1362 1229 28 0 20 chr15 101849083 101849230 -1645744 + B1_Mus1 SINE Alu 5 148 0 4 1362 971 257 24 0 chr15 101849247 101849457 -1645517 - B3 SINE B2 0 216 2 4 1362 418 110 35 7 chr15 101849465 101849592 -1645382 - B2_Mm2 SINE B2 -1 194 20 4 1362 1378 68 11 0 chr15 101849599 101849776 -1645198 - B2_Mm1t SINE B2 -14 179 1 4 1362 2081 196 33 30 chr15 101850001 101850400 -1644574 + MTD LTR MaLR 15 414 -5 4 1362 387 192 0 52 chr15 101850642 101850719 -1644255 + ID_B1 SINE B4 123 195 -29 4 1362 467 253 29 92 chr15 101850789 101850938 -1644036 + RSINE1 SINE B4 3 148 -17 4 1362 204 125 0 0 chr15 101850938 101850970 -1644004 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1362 467 253 29 92 chr15 101850970 101850994 -1643980 + RSINE1 SINE B4 149 165 0 4 1362 726 178 0 0 chr15 101850994 101851157 -1643817 + (CA)n Simple_repeat Simple_repeat 1 163 0 4 1362 306 241 23 108 chr15 101851159 101851289 -1643685 + L1M4b LINE L1 1814 1932 -5402 4 1362 421 158 0 35 chr15 101851291 101851376 -1643598 + L1_Mus1 LINE L1 6486 6567 0 4 1362 394 259 70 26 chr15 101851412 101851527 -1643447 + PB1D9 SINE Alu 1 120 0 4 1362 417 342 20 0 chr15 101851748 101851894 -1643080 + B1F SINE Alu 1 149 0 4 1362 966 156 191 16 chr15 101852171 101852354 -1642620 - B3 SINE B2 0 216 2 4 1362 207 0 0 0 chr15 101852366 101852389 -1642585 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1362 1374 66 5 22 chr15 101852402 101852587 -1642387 - B2_Mm1a SINE B2 -8 185 4 4 1362 555 286 36 0 chr15 101852592 101852732 -1642242 - ID_B1 SINE B4 0 224 80 4 1362 832 165 0 29 chr15 101852787 101852924 -1642050 - B1_Mur3 SINE Alu -16 133 1 4 1362 1781 169 18 86 chr15 101853260 101853715 -1641259 + RMER17C LTR ERVK 1 706 -397 4 1362 271 306 0 0 chr15 101853787 101853849 -1641125 - ID4_ SINE ID -21 62 1 4 1362 298 285 101 73 chr15 101853859 101853879 -1641095 - B2_Mm2 SINE B2 -3 192 173 4 1362 400 230 35 9 chr15 101853879 101853993 -1640981 - PB1D9 SINE Alu -1 119 3 5 1362 298 285 101 73 chr15 101853993 101854150 -1640824 - B2_Mm2 SINE B2 -23 172 10 4 1362 604 210 92 0 chr15 101854036 101854155 -1640819 - RSINE1 SINE B4 -30 135 6 5 1362 928 166 0 14 chr15 101854632 101854779 -1640195 + B1_Mus2 SINE Alu 2 146 -1 5 1362 339 205 47 132 chr15 101854948 101854980 -1639994 - B1_Mur3 SINE Alu -31 118 1 5 1362 389 237 124 0 chr15 101854980 101855077 -1639897 - ID_B1 SINE B4 -34 190 82 5 1362 291 194 208 0 chr15 101855292 101855364 -1639610 + PB1D10 SINE Alu 23 109 -8 5 1362 277 250 21 32 chr15 101855381 101855476 -1639498 + B1_Mus2 SINE Alu 14 107 -40 5 1362 957 236 18 23 chr15 101857617 101857834 -1637140 + ID_B1 SINE B4 2 217 -7 5 1362 249 33 0 0 chr15 101857834 101857864 -1637110 + (GGA)n Simple_repeat Simple_repeat 3 32 0 5 1362 288 0 0 0 chr15 101858205 101858237 -1636737 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 1362 1138 37 8 0 chr15 101858237 101858371 -1636603 - B1_Mus2 SINE Alu -10 137 3 5 1362 21 71 0 0 chr15 101859534 101859576 -1635398 + GC_rich Low_complexity Low_complexity 1 42 0 5 1362 315 0 0 0 chr15 101859808 101859843 -1635131 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1362 268 260 52 36 chr15 101860616 101860718 -1634256 + PB1D10 SINE Alu 21 133 -16 5 1362 429 239 91 0 chr15 101862669 101862799 -1632175 + B1F SINE Alu 1 149 0 5 1362 594 278 30 0 chr15 101862796 101862929 -1632045 + ID_B1 SINE B4 80 216 -8 5 1362 391 224 90 36 chr15 101862954 101863065 -1631909 + PB1D10 SINE Alu 1 117 0 5 1362 719 163 89 0 chr15 101863459 101863582 -1631392 + B1_Mur2 SINE Alu 3 136 -13 5 1362 21 36 0 0 chr15 101863598 101863626 -1631348 + AT_rich Low_complexity Low_complexity 1 28 0 5 1362 396 257 10 42 chr15 101863892 101864001 -1630973 + B1F SINE Alu 5 109 -11 5 1362 238 297 84 56 chr15 101864186 101864293 -1630681 - L2b LINE L2 -7 3368 3259 5 1362 227 357 61 69 chr15 101864324 101864586 -1630388 - L2a LINE L2 -29 3397 3138 5 1362 387 333 91 15 chr15 101865256 101865454 -1629520 - MIRc SINE MIR -8 260 48 5 1362 195 42 0 0 chr15 101865498 101865522 -1629452 + (TTGG)n Simple_repeat Simple_repeat 4 27 0 5 1362 513 0 0 0 chr15 101865561 101865618 -1629356 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1362 394 281 7 59 chr15 101865753 101865889 -1629085 - MER5B DNA MER1_type -39 139 11 5 1362 931 150 7 0 chr15 101866398 101866545 -1628429 + B1_Mus1 SINE Alu 1 148 0 5 1362 390 222 14 7 chr15 101866545 101866637 -1628337 + GA-rich Low_complexity Low_complexity 3 96 0 5 1362 1239 48 0 7 chr15 101866637 101866784 -1628190 + B1_Mus2 SINE Alu 2 147 0 5 1362 390 222 14 7 chr15 101866784 101866836 -1628138 + polypurine Low_complexity Low_complexity 97 147 0 5 1362 462 194 101 9 chr15 101866880 101866989 -1627985 + PB1D9 SINE Alu 1 119 -1 5 1362 384 225 0 0 chr15 101866998 101867069 -1627905 - ID4_ SINE ID -11 72 2 5 1362 252 0 0 0 chr15 101867073 101867101 -1627873 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 5 1362 493 192 28 28 chr15 101867104 101867211 -1627763 - B1F SINE Alu -5 144 38 5 1362 198 343 28 9 chr15 101867408 101867514 -1627460 - L2a LINE L2 -104 3322 3215 5 1362 540 271 20 20 chr15 101867566 101867713 -1627261 + B1F SINE Alu 3 149 0 5 1362 249 295 13 13 chr15 101867914 101867993 -1626981 - ID4 SINE ID -3 80 2 5 1362 573 64 0 0 chr15 101868142 101868220 -1626754 + (TTCC)n Simple_repeat Simple_repeat 4 81 0 5 1362 351 0 0 0 chr15 101868237 101868276 -1626698 + (TATG)n Simple_repeat Simple_repeat 4 42 0 5 1362 307 287 87 183 chr15 101868291 101868521 -1626453 - ID_B1 SINE B4 -13 211 4 5 1362 226 194 41 82 chr15 101868591 101868664 -1626310 - Tigger10 DNA Tigger -702 1141 1072 5 1362 717 159 7 96 chr15 101868835 101868981 -1625993 - ID_B1 SINE B4 -8 216 84 5 1362 564 264 68 47 chr15 101868910 101869101 -1625873 - MLT1D LTR MaLR -296 209 15 5 1362 194 279 34 34 chr15 101869103 101869192 -1625782 - L2a LINE L2 -220 3155 3067 5 1362 466 253 154 45 chr15 101869538 101869585 -1625389 - B3A SINE B2 0 216 163 5 1362 207 0 0 0 chr15 101869585 101869608 -1625366 + (TGG)n Simple_repeat Simple_repeat 1 23 0 5 1362 466 237 159 40 chr15 101869608 101869756 -1625218 - B3A SINE B2 -30 168 2 5 1362 300 250 34 56 chr15 101869959 101870048 -1624926 - MIR SINE MIR -1 261 175 5 1362 1044 71 119 25 chr15 101870082 101870241 -1624733 - B2_Mm2 SINE B2 -19 176 3 5 1362 281 289 88 82 chr15 101870264 101870434 -1624540 - RLTR25A LTR ERVK -411 692 522 5 1362 636 133 76 0 chr15 101870367 101870472 -1624502 - B1_Mus1 SINE Alu -35 113 1 5 1362 916 209 97 0 chr15 101870499 101870695 -1624279 + B3 SINE B2 1 215 -1 5 1362 437 288 44 90 chr15 101870742 101871066 -1623908 - B4 SINE B4 -2 290 1 5 1362 817 129 0 20 chr15 101871085 101871138 -1623836 + (TTCC)n Simple_repeat Simple_repeat 1 53 0 5 1362 485 278 0 34 chr15 101871138 101871257 -1623717 - PB1D10 SINE Alu 0 117 3 5 1362 817 129 0 20 chr15 101871257 101871353 -1623621 + (TTCC)n Simple_repeat Simple_repeat 3 96 0 5 1362 468 184 92 84 chr15 101871355 101871474 -1623500 - PB1D9 SINE Alu 0 120 1 5 1362 447 302 9 0 chr15 101871476 101871592 -1623382 - PB1D10 SINE Alu 0 117 1 5 1362 195 42 0 0 chr15 101871612 101871636 -1623338 + (TTA)n Simple_repeat Simple_repeat 3 26 0 5 1362 492 62 0 0 chr15 101871638 101871702 -1623272 + (TG)n Simple_repeat Simple_repeat 2 65 0 5 1362 483 280 23 53 chr15 101871707 101871757 -1623217 - B3A SINE B2 -56 142 95 5 1362 2202 116 3 6 chr15 101871757 101872069 -1622905 + RLTR10E LTR ERVK 1 311 0 5 1362 483 280 23 53 chr15 101872069 101872150 -1622824 - B3A SINE B2 -104 94 15 5 1362 298 250 26 26 chr15 101872152 101872230 -1622744 - MIR SINE MIR -156 106 29 5 1362 200 94 31 0 chr15 101873394 101873426 -1621548 + (CGGGGG)n Simple_repeat Simple_repeat 6 38 0 5 1362 216 86 0 0 chr15 101873647 101873682 -1621292 + (TTTTTG)n Simple_repeat Simple_repeat 6 40 0 5 1362 813 28 19 19 chr15 101873682 101873790 -1621184 - B1_Mm SINE Alu 0 147 40 5 1362 330 132 100 50 chr15 101873727 101873807 -1621167 - RLTR25B LTR ERVK -519 509 426 5 1362 317 203 83 119 chr15 101873795 101873879 -1621095 - PB1D7 SINE Alu -1 126 46 5 1362 1171 167 19 5 chr15 101873865 101874070 -1620904 + B3 SINE B2 9 216 0 5 1362 318 169 98 33 chr15 101874166 101874227 -1620747 + ID4_ SINE ID 2 66 -17 5 1362 568 70 23 0 chr15 101874391 101874477 -1620497 + (TTTC)n Simple_repeat Simple_repeat 3 90 0 5 1362 383 262 0 12 chr15 101874477 101874562 -1620412 - PB1D9 SINE Alu 0 120 37 5 1362 282 228 36 0 chr15 101874569 101874643 -1620331 - PB1D10 SINE Alu -53 96 13 5 1362 491 219 28 28 chr15 101874716 101874824 -1620150 + MTC LTR MaLR 1 108 -313 5 1362 930 121 0 0 chr15 101874813 101874945 -1620029 + B1_Mur4 SINE Alu 18 149 -1 5 1362 689 178 216 12 chr15 101874956 101875127 -1619847 + B3 SINE B2 1 206 -10 5 1362 519 310 97 58 chr15 101875688 101876017 -1618957 + ERVL-E-int LTR ERVL 3739 4080 -1587 5 1362 328 304 63 28 chr15 101876166 101876308 -1618666 + MLT1D LTR MaLR 350 496 -9 5 1362 583 192 74 16 chr15 101876464 101876586 -1618388 + ID_B1 SINE B4 94 222 -2 5 1362 596 285 7 14 chr15 101876600 101876746 -1618228 + B1F2 SINE Alu 5 149 0 5 1362 249 159 0 0 chr15 101876746 101876790 -1618184 + A-rich Low_complexity Low_complexity 2 45 0 5 1362 879 134 14 34 chr15 101876871 101877018 -1617956 + B1_Mur4 SINE Alu 1 144 -6 5 1362 1302 81 23 0 chr15 101877027 101877199 -1617775 + B2_Mm2 SINE B2 1 176 -19 5 1362 329 202 147 0 chr15 101877212 101877321 -1617653 - RCHARR1 DNA MER1_type -10 964 840 5 1362 538 283 72 0 chr15 101877462 101877614 -1617360 + ID_B1 SINE B4 61 223 -1 5 1362 418 255 0 21 chr15 101877716 101877812 -1617162 + PB1D10 SINE Alu 24 117 0 5 1362 207 0 0 0 chr15 101877857 101877880 -1617094 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1362 249 283 33 0 chr15 101877902 101877962 -1617012 - ID SINE ID -140 84 23 5 1362 332 229 133 20 chr15 101877969 101878067 -1616907 + L1MD1 LINE L1 3195 3303 -2843 5 1362 629 221 7 75 chr15 101878073 101878220 -1616754 - ID_B1 SINE B4 0 224 88 5 1362 309 260 100 100 chr15 101878231 101878462 -1616512 + L1MD1 LINE L1 4623 4853 -1293 5 1362 310 243 76 0 chr15 101878465 101878563 -1616411 - PB1D7 SINE Alu 0 120 14 5 1362 805 240 40 55 chr15 101878565 101878891 -1616083 + L1MD1 LINE L1 4845 5165 -981 5 1362 1416 58 0 69 chr15 101878920 101879123 -1615851 + B2_Mm2 SINE B2 1 189 -6 5 1362 282 297 0 62 chr15 101879138 101879152 -1615822 + ID_B1 SINE B4 134 224 0 5 1362 363 250 0 36 chr15 101879152 101879235 -1615739 + B1F SINE Alu 70 149 0 5 1362 201 237 0 0 chr15 101879292 101879330 -1615644 + polypurine Low_complexity Low_complexity 1 38 0 5 1362 1417 241 194 28 chr15 101879400 101879453 -1615521 + L1MD1 LINE L1 5263 5327 -915 5 1362 1994 185 96 8 chr15 101879453 101879840 -1615134 - MTC LTR MaLR 0 421 1 5 1362 1417 241 194 28 chr15 101879840 101879946 -1615028 + L1MD1 LINE L1 5328 5444 -798 5 1362 721 247 144 11 chr15 101879946 101880126 -1614848 + B3 SINE B2 1 204 -12 5 1362 1385 46 69 0 chr15 101880127 101880301 -1614673 - B2_Mm2 SINE B2 -9 186 1 5 1362 1417 241 194 28 chr15 101880301 101880715 -1614259 + L1MD1 LINE L1 5445 5934 -308 5 1362 1014 16 0 8 chr15 101880730 101880853 -1614121 - B1_Mus2 SINE Alu 0 147 26 5 1362 359 260 20 20 chr15 101880946 101881048 -1613926 + ID_B1 SINE B4 123 224 0 5 1362 252 182 71 83 chr15 101881054 101881138 -1613836 + L1MD1 LINE L1 6139 6221 -21 5 1362 2585 80 28 28 chr15 101881166 101881528 -1613446 + RLTR8 LTR ERVK 1 362 -3 5 1362 687 236 53 31 chr15 101881537 101881741 -1613233 + B3A SINE B2 24 214 -2 5 1362 501 259 60 13 chr15 101881749 101881898 -1613076 + RSINE1 SINE B4 10 165 0 6 1362 394 262 22 60 chr15 101882027 101882161 -1612813 - ID_B1 SINE B4 -3 221 93 6 1362 206 32 32 0 chr15 101882174 101882205 -1612769 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 1362 189 132 0 0 chr15 101882482 101882520 -1612454 + (G)n Simple_repeat Simple_repeat 1 38 0 6 1362 283 222 222 0 chr15 101882908 101883007 -1611967 + B4 SINE B4 103 223 -69 6 1362 750 196 158 27 chr15 101883034 101883218 -1611756 + B3 SINE B2 2 209 -7 6 1362 727 101 389 0 chr15 101883240 101883379 -1611595 + B2_Mm2 SINE B2 2 194 -1 6 1362 1092 101 7 7 chr15 101883405 101883554 -1611420 + B1_Mur3 SINE Alu 1 149 0 6 1362 275 310 0 0 chr15 101883572 101883630 -1611344 + B4 SINE B4 231 288 -4 6 1362 1320 107 17 0 chr15 101883630 101883807 -1611167 + B2_Mm2 SINE B2 2 181 -14 6 1362 1086 211 24 10 chr15 101883950 101884156 -1610818 - B3 SINE B2 -5 211 3 6 1362 229 220 80 0 chr15 101884189 101884239 -1610735 + ZP3AR Satellite Satellite 27 80 -132 6 1362 248 291 185 49 chr15 101884377 101884561 -1610413 + MER3 DNA MER1_type 1 209 0 6 1362 897 69 0 0 chr15 101884689 101884819 -1610155 + (TG)n Simple_repeat Simple_repeat 2 131 0 6 1362 441 0 0 0 chr15 101884886 101884935 -1610039 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1362 619 146 9 0 chr15 101884956 101885066 -1609908 - Lx2 LINE L1 -1 6996 6886 6 1362 288 328 0 0 chr15 101885081 101885145 -1609829 - MER63D DNA AcHobo -682 379 316 6 1362 477 240 80 32 chr15 101885308 101885433 -1609541 + B1F2 SINE Alu 1 131 -18 6 1362 22 0 0 0 chr15 101885551 101885573 -1609401 + AT_rich Low_complexity Low_complexity 1 22 0 6 1362 455 198 0 0 chr15 101885575 101885656 -1609318 + B1_Mus2 SINE Alu 1 81 -66 6 1362 918 152 14 0 chr15 101885694 101885839 -1609135 - B1_Mur3 SINE Alu -2 147 1 6 1362 446 253 0 44 chr15 101885841 101885932 -1609042 - RSINE1 SINE B4 -68 97 11 6 1362 1047 233 10 0 chr15 101885965 101886171 -1608803 - B3 SINE B2 -6 210 3 6 1362 635 207 13 52 chr15 101886181 101886334 -1608640 - B1_Mus2 SINE Alu 0 147 1 6 1362 429 292 9 0 chr15 101886337 101886443 -1608531 - PB1D9 SINE Alu -1 119 13 6 1362 539 299 25 13 chr15 101887920 101888079 -1606895 - B3A SINE B2 0 198 38 6 1362 216 0 0 0 chr15 101888093 101888117 -1606857 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 6 1362 10982 41 0 0 chr15 101888123 101890217 -1604757 - L1Md_F2 LINE L1 -14 6568 4475 6 1362 214 143 58 58 chr15 101890217 101890269 -1604705 - B3 SINE B2 -163 53 2 6 1362 551 171 0 8 chr15 101890854 101890984 -1603990 + (CA)n Simple_repeat Simple_repeat 1 129 0 6 1362 477 0 0 0 chr15 101891283 101891336 -1603638 + (TC)n Simple_repeat Simple_repeat 2 54 0 6 1362 330 26 0 0 chr15 101891336 101891374 -1603600 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1362 303 28 0 0 chr15 101891375 101891411 -1603563 + (GCTG)n Simple_repeat Simple_repeat 1 36 0 6 1362 498 268 76 14 chr15 101891480 101891624 -1603350 - ID_B1 SINE B4 -70 154 2 6 1362 481 234 26 18 chr15 101891624 101891731 -1603243 - B1F1 SINE Alu -37 112 5 6 1362 455 283 75 0 chr15 101891936 101892056 -1602918 - ID_B1 SINE B4 -9 215 87 6 1362 216 350 24 59 chr15 101892451 101892536 -1602438 + ID4_ SINE ID 2 83 0 6 1362 320 215 0 0 chr15 101892553 101892618 -1602356 + tRNA-Ala-GCA tRNA tRNA 3 67 -8 6 1362 405 81 0 0 chr15 101892801 101892863 -1602111 + (TC)n Simple_repeat Simple_repeat 1 62 0 6 1362 195 289 32 32 chr15 101893142 101893235 -1601739 - L2c LINE L2 -151 3236 3144 6 1362 447 304 88 0 chr15 101893367 101893515 -1601459 + RSINE1 SINE B4 3 163 -2 6 1362 180 200 0 0 chr15 101894760 101894805 -1600169 + (CACG)n Simple_repeat Simple_repeat 3 47 0 6 1362 464 229 282 14 chr15 101894926 101895068 -1599906 + B3A SINE B2 2 181 -17 6 1362 591 15 0 0 chr15 101895428 101895496 -1599478 + (TCC)n Simple_repeat Simple_repeat 1 68 0 6 1362 2318 112 59 3 chr15 101895557 101895914 -1599060 + MTC LTR MaLR 1 377 -44 6 1362 466 192 411 0 chr15 101896732 101896883 -1598091 - B3 SINE B2 -3 213 1 6 1362 620 204 0 169 chr15 101896918 101896970 -1598004 + B1_Mur2 SINE Alu 3 54 -95 6 1362 1037 115 0 13 chr15 101896970 101897120 -1597854 + B1_Mus1 SINE Alu 1 148 0 6 1362 620 204 0 169 chr15 101897120 101897244 -1597730 + B1_Mur2 SINE Alu 55 149 0 6 1362 498 368 0 0 chr15 101897252 101897388 -1597586 + RSINE1 SINE B4 1 136 -29 6 1362 451 70 0 0 chr15 101897434 101897491 -1597483 - B1_Mus2 SINE Alu -5 142 86 6 1362 216 97 0 0 chr15 101897605 101897636 -1597338 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1362 444 240 61 46 chr15 101898083 101898214 -1596760 - B1F SINE Alu -2 147 15 6 1362 538 227 14 20 chr15 101898214 101898231 -1596743 - ID_B1 SINE B4 0 224 4 6 1362 424 198 39 101 chr15 101898671 101898734 -1596240 + MER97c DNA MER1_type? 53 114 -976 6 1362 1147 105 87 0 chr15 101898734 101898906 -1596068 - B2_Mm2 SINE B2 -4 191 5 6 1362 424 198 39 101 chr15 101898906 101898971 -1596003 + MER97c DNA MER1_type? 115 173 -917 6 1362 339 303 30 0 chr15 101899070 101899169 -1595805 + MER97c DNA MER1_type? 234 335 -755 6 1362 457 283 57 0 chr15 101899208 101899314 -1595660 - RSINE1 SINE B4 0 165 54 6 1362 40 59 0 0 chr15 101899408 101899476 -1595498 + AT_rich Low_complexity Low_complexity 1 68 0 6 1362 269 312 18 27 chr15 101899665 101899777 -1595197 + RMER15 LTR ERVL 355 465 -110 6 1362 218 32 32 0 chr15 101899856 101899887 -1595087 + (CCCCCA)n Simple_repeat Simple_repeat 4 35 0 6 1362 694 301 38 0 chr15 101899900 101900083 -1594891 - ID_B1 SINE B4 -34 190 1 6 1362 365 203 58 0 chr15 101900372 101900441 -1594533 - B1_Mur4 SINE Alu -5 145 73 6 1362 508 244 172 22 chr15 101900472 101900493 -1594481 - B3 SINE B2 -9 207 187 6 1362 198 0 0 0 chr15 101900493 101900515 -1594459 + (CATG)n Simple_repeat Simple_repeat 1 22 0 6 1362 508 244 172 22 chr15 101900515 101900574 -1594400 - B3 SINE B2 -30 186 106 6 1362 180 0 0 0 chr15 101900574 101900594 -1594380 + (TGGGGG)n Simple_repeat Simple_repeat 2 21 0 6 1362 508 244 172 22 chr15 101900594 101900692 -1594282 - B3 SINE B2 -111 105 2 6 1362 799 248 31 139 chr15 101900770 101901256 -1593718 - RLTR11B LTR ERVK -65 462 1 6 1362 418 272 38 70 chr15 101901336 101901353 -1593621 + B4 SINE B4 71 82 -210 6 1362 830 156 35 0 chr15 101901353 101901497 -1593477 + B1_Mur4 SINE Alu 1 150 0 6 1362 745 256 0 36 chr15 101901508 101901542 -1593432 + B3 SINE B2 1 29 -187 6 1362 1915 162 101 27 chr15 101901542 101901909 -1593065 + ORR1B1 LTR MaLR 1 394 0 6 1362 745 256 0 36 chr15 101901909 101902040 -1592934 + B3 SINE B2 30 160 -56 6 1362 702 213 49 7 chr15 101902050 101902192 -1592782 + B1_Mur1 SINE Alu 2 149 0 6 1362 636 111 0 0 chr15 101902199 101902298 -1592676 + (GA)n Simple_repeat Simple_repeat 1 99 0 6 1362 763 158 0 38 chr15 101902354 101902486 -1592488 + B1_Mur4 SINE Alu 24 150 0 6 1362 182 385 12 0 chr15 101902562 101902645 -1592329 - L2 LINE L2 -626 2793 2710 6 1362 281 305 42 10 chr15 101902731 101902827 -1592147 - ID_B1 SINE B4 -20 204 106 6 1362 638 221 0 75 chr15 101902927 101903074 -1591900 - B1_Mur1 SINE Alu 0 149 14 6 1362 803 212 14 7 chr15 101903074 101903221 -1591753 + B1_Mur2 SINE Alu 1 148 -1 6 1362 899 104 325 0 chr15 101903296 101903459 -1591515 - B3 SINE B2 0 216 1 6 1362 185 119 24 0 chr15 101903463 101903505 -1591469 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 1362 241 269 0 0 chr15 101903526 101903578 -1591396 + B3A SINE B2 1 52 -146 6 1362 209 286 0 72 chr15 101903670 101903753 -1591221 + L2a LINE L2 3341 3417 -9 6 1362 21 0 0 0 chr15 101903753 101903774 -1591200 + AT_rich Low_complexity Low_complexity 1 21 0 6 1362 21 0 0 0 chr15 101904239 101904260 -1590714 + GC_rich Low_complexity Low_complexity 1 21 0 6 1362 241 157 0 105 chr15 101905177 101905234 -1589740 - L2c LINE L2 -5 3382 3332 6 1362 197 0 71 0 chr15 101905440 101905468 -1589506 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 6 1362 241 209 130 29 chr15 101905833 101905902 -1589072 - ID4_ SINE ID -6 77 2 6 1362 489 179 36 0 chr15 101906810 101906894 -1588080 + PB1D7 SINE Alu 29 115 -5 6 1362 965 106 41 28 chr15 101907313 101907458 -1587516 + B1_Mus2 SINE Alu 1 147 0 6 1362 1308 67 45 6 chr15 101907568 101907747 -1587227 - B2_Mm1a SINE B2 -7 186 1 6 1362 556 207 72 0 chr15 101907795 101907906 -1587068 - PB1D9 SINE Alu 0 120 2 6 1362 217 257 229 37 chr15 101907920 101908029 -1586945 - B3A SINE B2 -5 193 64 6 1362 1227 41 0 13 chr15 101908281 101908430 -1586544 - B1_Mus2 SINE Alu 0 147 1 6 1362 388 129 12 0 chr15 101908529 101908599 -1586375 - B2_Mm2 SINE B2 -96 120 47 6 1362 1390 53 65 0 chr15 101908612 101908781 -1586193 - B2_Mm2 SINE B2 -14 181 2 6 1362 614 256 16 0 chr15 101909045 101909174 -1585800 + B3 SINE B2 3 133 -83 6 1362 783 199 60 0 chr15 101909221 101909387 -1585587 - B2_Mm2 SINE B2 -18 177 2 6 1362 237 65 0 0 chr15 101909472 101909503 -1585471 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 6 1362 1213 48 7 0 chr15 101909504 101909649 -1585325 - B1_Mus2 SINE Alu -1 146 1 6 1362 245 120 216 20 chr15 101909705 101909756 -1585218 + ID4_ SINE ID 14 74 -9 6 1362 604 259 30 30 chr15 101909715 101909882 -1585092 + ID_B1 SINE B4 36 202 -22 6 1362 1355 94 11 0 chr15 101910354 101910535 -1584439 + B2_Mm1t SINE B2 2 184 -9 6 1362 361 38 37 19 chr15 101910605 101910659 -1584315 + B1_Mm SINE Alu 93 147 0 6 1362 288 289 82 0 chr15 101910675 101910772 -1584202 + B4 SINE B4 82 186 -106 7 1362 450 223 26 5 chr15 101910687 101910807 -1584167 + PB1D9 SINE Alu 11 132 -17 7 1362 470 195 0 13 chr15 101911442 101911520 -1583454 - B3A SINE B2 -119 79 3 7 1362 586 120 48 1 chr15 101911660 101911767 -1583207 - B1_Mus1 SINE Alu -1 116 1 7 1362 247 154 56 37 chr15 101911928 101911982 -1582992 - PB1D7 SINE Alu -1 119 65 7 1362 775 266 74 0 chr15 101911935 101912138 -1582836 - ID_B1 SINE B4 -6 218 1 7 1362 486 0 0 0 chr15 101912143 101912197 -1582777 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 1362 183 275 58 92 chr15 101912365 101912485 -1582489 + L3 LINE CR1 2149 2264 -2225 7 1362 362 267 89 0 chr15 101913043 101913144 -1581830 - PB1D9 SINE Alu -9 111 2 7 1362 406 288 50 7 chr15 101913176 101913316 -1581658 - B1_Mur1 SINE Alu -1 148 3 7 1362 479 167 35 23 chr15 101913991 101914077 -1580897 - B3 SINE B2 -129 87 1 7 1362 558 226 0 57 chr15 101914228 101914350 -1580624 - B1_Mus1 SINE Alu 0 148 34 7 1362 216 321 17 102 chr15 101914424 101914542 -1580432 - B1F1 SINE Alu -9 140 33 7 1362 209 161 0 31 chr15 101915038 101915102 -1579872 + (TTTG)n Simple_repeat Simple_repeat 3 64 0 7 1362 697 225 112 6 chr15 101915251 101915421 -1579553 + B3 SINE B2 1 188 -28 7 1362 247 236 0 0 chr15 101915981 101916036 -1578938 - B1F SINE Alu -2 147 93 7 1362 1152 76 0 0 chr15 101916234 101916379 -1578595 - B1_Mus2 SINE Alu -2 145 1 7 1362 1004 119 53 58 chr15 101917683 101917871 -1577103 + B2_Mm2 SINE B2 2 188 -7 7 1362 367 202 56 11 chr15 101918017 101918107 -1576867 - PB1D9 SINE Alu -1 119 26 7 1362 543 167 98 0 chr15 101918122 101918224 -1576750 + B1_Mur3 SINE Alu 2 113 -36 7 1362 236 161 35 184 chr15 101918158 101918272 -1576702 + RLTR25B LTR ERVK 447 543 -485 7 1362 564 245 78 21 chr15 101918393 101918535 -1576439 - RSINE1 SINE B4 -13 152 3 7 1362 319 299 0 13 chr15 101918825 101918903 -1576071 - ID4_ SINE ID -6 77 1 7 1362 563 173 159 38 chr15 101921147 101921279 -1573695 - B1_Mur2 SINE Alu 0 149 2 7 1362 662 254 123 12 chr15 101921492 101921663 -1573311 + B3 SINE B2 25 214 -2 7 1362 288 262 0 16 chr15 101921657 101921719 -1573255 + B4 SINE B4 217 277 -15 7 1362 292 216 66 3 chr15 101921997 101922071 -1572903 - B1_Mur3 SINE Alu -21 128 52 7 1362 284 206 62 31 chr15 101922578 101922643 -1572331 + B3 SINE B2 90 156 -60 7 1362 289 261 14 55 chr15 101924164 101924237 -1570737 + B3 SINE B2 56 125 -91 7 1362 712 128 175 8 chr15 101924324 101924450 -1570524 - B1_Mus1 SINE Alu 0 148 2 7 1362 295 123 34 34 chr15 101928081 101928140 -1566834 - B1_Mur4 SINE Alu 0 150 92 7 1362 225 65 0 0 chr15 101930854 101930885 -1564089 + (CCG)n Simple_repeat Simple_repeat 3 33 0 7 1362 303 343 105 21 chr15 101935243 101935386 -1559588 - HAL1-3A_ME LINE L1 -420 2438 2284 7 1362 669 230 0 0 chr15 101935386 101935564 -1559410 + CT-rich Low_complexity Low_complexity 2 179 0 7 1362 210 91 0 0 chr15 101937735 101937768 -1557206 + (CGGGG)n Simple_repeat Simple_repeat 5 37 0 7 1362 180 0 0 0 chr15 101938165 101938185 -1556789 + (CA)n Simple_repeat Simple_repeat 1 20 0 7 1362 180 0 0 0 chr15 101938185 101938204 -1556770 + (TA)n Simple_repeat Simple_repeat 2 21 0 7 1362 1294 244 139 22 chr15 101938643 101939053 -1555921 - MLT1C LTR MaLR -5 462 5 7 1362 295 314 123 7 chr15 101939445 101939599 -1555375 - L2a LINE L2 -41 3385 3214 7 1362 809 60 23 100 chr15 101940308 101940354 -1554620 - ORR1A2 LTR MaLR -8 318 285 7 1362 1331 95 16 11 chr15 101940354 101940545 -1554429 - B2_Mm2 SINE B2 -3 192 1 7 1362 882 130 109 31 chr15 101940545 101940779 -1554195 - ORR1A2 LTR MaLR -42 284 1 7 1362 359 333 77 32 chr15 101945720 101945940 -1549034 - B4A SINE B4 -61 231 2 7 1362 276 170 0 0 chr15 101948504 101948557 -1546417 + CT-rich Low_complexity Low_complexity 3 55 0 7 1362 223 338 59 25 chr15 101951634 101951735 -1543239 + MIRb SINE MIR 52 151 -117 7 1362 948 184 32 0 chr15 101952582 101952767 -1542207 + B3 SINE B2 2 192 -24 7 1362 243 284 30 0 chr15 101952794 101952861 -1542113 + ID4_ SINE ID 3 71 -12 7 1362 1593 47 0 10 chr15 101952881 101953076 -1541898 + B2_Mm1a SINE B2 1 193 0 7 1362 368 179 83 15 chr15 101953104 101953200 -1541774 + PB1D10 SINE Alu 26 126 -21 7 1362 600 108 161 9 chr15 101953248 101953360 -1541614 + B1_Mus2 SINE Alu 19 147 0 7 1362 232 306 0 61 chr15 101953534 101953600 -1541374 - ID4_ SINE ID -4 79 18 7 1362 802 100 77 0 chr15 101953656 101953786 -1541188 - B1_Mus1 SINE Alu 0 148 9 7 1362 591 157 16 40 chr15 101953782 101953908 -1541066 + B1_Mur1 SINE Alu 20 142 -7 7 1362 1805 39 4 0 chr15 101953908 101954141 -1540833 + MERVL-int LTR ERVL 5132 5365 -120 7 1362 388 152 12 37 chr15 101954141 101954223 -1540751 + ORR1A3-int LTR MaLR 561 640 -1323 7 1362 297 0 0 0 chr15 101954223 101954261 -1540713 + MERVL-int LTR ERVL 5448 5485 0 7 1362 4543 14 0 0 chr15 101954261 101954754 -1540220 + MT2_Mm LTR ERVL 1 493 0 7 1362 550 64 1 0 chr15 101954755 101954833 -1540141 - Lx LINE L1 -333 6305 6227 7 1362 1005 116 14 7 chr15 101955138 101955285 -1539689 + B1_Mus1 SINE Alu 1 148 0 7 1362 656 244 24 55 chr15 101955317 101955482 -1539492 + RSINE1 SINE B4 6 165 0 7 1362 753 202 25 31 chr15 101955850 101956013 -1538961 + RSINE1 SINE B4 4 165 0 7 1362 1080 50 50 14 chr15 101956069 101956210 -1538764 + B1_Mus2 SINE Alu 2 147 0 7 1362 1637 17 0 0 chr15 101956223 101956401 -1538573 + B2_Mm1a SINE B2 1 178 -15 7 1362 213 39 0 0 chr15 101956401 101956427 -1538547 + (GAAAA)n Simple_repeat Simple_repeat 2 27 0 7 1362 558 232 72 7 chr15 101956468 101956607 -1538367 + B1F SINE Alu 1 148 -1 7 1362 377 278 63 0 chr15 101957541 101957667 -1537307 + B1_Mus1 SINE Alu 15 148 0 7 1362 189 0 0 0 chr15 101957734 101957755 -1537219 + (CA)n Simple_repeat Simple_repeat 2 22 0 7 1362 964 30 99 63 chr15 101958201 101958343 -1536631 - B1_Mus2 SINE Alu 0 147 1 7 1362 378 161 152 54 chr15 101958348 101958440 -1536534 + PB1D9 SINE Alu 18 118 -2 7 1362 1267 102 11 6 chr15 101958450 101958628 -1536346 + B2_Mm1t SINE B2 1 179 -14 7 1362 242 133 321 36 chr15 101958696 101958808 -1536166 + B2_Mm2 SINE B2 50 193 -2 7 1362 213 235 20 0 chr15 101958808 101958859 -1536115 + GA-rich Low_complexity Low_complexity 1 52 0 7 1362 652 103 0 0 chr15 101959672 101959769 -1535205 - B1_Mus2 SINE Alu 0 147 51 7 1362 585 174 267 61 chr15 101959758 101959923 -1535051 - B3 SINE B2 -9 207 9 7 1362 593 257 140 32 chr15 101959930 101960151 -1534823 - Lx8 LINE L1 0 7473 7229 7 1362 1074 83 0 0 chr15 101960172 101960305 -1534669 + B1_Mus1 SINE Alu 2 134 -14 7 1362 197 0 0 67 chr15 101960308 101960338 -1534636 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 7 1362 426 294 196 17 chr15 101960341 101960514 -1534460 - ID_B1 SINE B4 -20 204 1 7 1362 507 195 0 0 chr15 101961395 101961482 -1533492 + B1_Mur2 SINE Alu 1 87 -62 7 1362 822 86 0 0 chr15 101961522 101961639 -1533335 + B1_Mus1 SINE Alu 1 117 -31 7 1362 522 261 9 54 chr15 101961645 101961816 -1533158 + B3A SINE B2 52 216 0 7 1362 1271 183 14 0 chr15 101961840 101962059 -1532915 + URR1B DNA MER1_type 1 222 -3 7 1362 706 124 18 0 chr15 101962524 101962637 -1532337 + B1_Mus2 SINE Alu 32 146 -1 7 1362 407 229 216 0 chr15 101962834 101962987 -1531987 - L3b LINE CR1 -215 267 82 7 1362 327 222 167 29 chr15 101963430 101963532 -1531442 + PB1D10 SINE Alu 1 116 -1 7 1362 282 275 100 0 chr15 101963532 101963612 -1531362 + RSINE1 SINE B4 6 93 -72 7 1362 180 0 0 0 chr15 101964153 101964173 -1530801 + (T)n Simple_repeat Simple_repeat 1 20 0 7 1362 1161 68 0 13 chr15 101964173 101964322 -1530652 - B1_Mus1 SINE Alu 0 148 2 7 1362 187 361 94 47 chr15 101964335 101964463 -1530511 - L2b LINE L2 -20 3355 3222 7 1362 934 89 185 31 chr15 101964478 101964640 -1530334 - B2_Mm2 SINE B2 -7 188 2 7 1362 1293 67 89 0 chr15 101964912 101965091 -1529883 + B2_Mm2 SINE B2 1 195 0 7 1362 1000 51 15 0 chr15 101965106 101965243 -1529731 + B1_Mm SINE Alu 9 147 0 7 1362 245 348 11 106 chr15 101965265 101965287 -1529687 + B4 SINE B4 70 184 -108 7 1362 619 206 13 33 chr15 101965287 101965438 -1529536 + B1_Mur3 SINE Alu 2 149 0 7 1362 566 137 179 0 chr15 101965552 101965669 -1529305 - B1_Mus2 SINE Alu -1 146 9 7 1362 257 191 80 110 chr15 101965606 101965706 -1529268 - MT2B LTR ERVL -366 235 139 7 1362 522 215 0 32 chr15 101965719 101965844 -1529130 + B1_Mus1 SINE Alu 28 148 0 7 1362 215 274 65 0 chr15 101966027 101966089 -1528885 + L2b LINE L2 3289 3354 -21 7 1362 1122 63 0 14 chr15 101968057 101968202 -1526772 - B1_Mus1 SINE Alu -2 146 4 7 1362 1068 54 209 0 chr15 101968319 101968467 -1526507 - B2_Mm2 SINE B2 -15 180 2 7 1362 189 74 0 0 chr15 101968521 101968548 -1526426 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 1362 508 188 29 19 chr15 101968614 101968717 -1526257 - B3 SINE B2 -111 105 2 7 1362 393 252 178 16 chr15 101969000 101969129 -1525845 - RSINE1 SINE B4 -14 151 2 7 1362 308 296 0 12 chr15 101969230 101969312 -1525662 + ID4_ SINE ID 3 83 0 8 1362 301 253 12 71 chr15 101969350 101969435 -1525539 + ID2 SINE ID 4 83 0 8 1362 647 230 8 0 chr15 101969469 101969595 -1525379 - B1_Mur2 SINE Alu -12 137 11 8 1362 301 297 52 91 chr15 101969501 101969714 -1525260 - MT2B LTR ERVL -327 257 46 8 1362 381 207 85 146 chr15 101970036 101970166 -1524808 + Lx8 LINE L1 7010 7131 -342 8 1362 240 295 75 25 chr15 101970224 101970384 -1524590 + Lx8 LINE L1 7303 7470 -3 8 1362 983 179 76 15 chr15 101970390 101970588 -1524386 + B3 SINE B2 2 211 -5 8 1362 1217 74 0 0 chr15 101970597 101970745 -1524229 + B1_Mus1 SINE Alu 1 148 0 8 1362 262 22 89 0 chr15 101970745 101970790 -1524184 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 8 1362 342 0 0 0 chr15 101971090 101971128 -1523846 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 1362 41 0 0 19 chr15 101971216 101971242 -1523732 + AT_rich Low_complexity Low_complexity 1 26 0 8 1362 977 134 0 32 chr15 101971242 101971396 -1523578 - B1_Mur3 SINE Alu 0 149 1 8 1362 41 0 0 19 chr15 101971396 101971421 -1523553 + AT_rich Low_complexity Low_complexity 1 25 0 8 1362 1215 55 0 0 chr15 101971429 101971575 -1523399 + B1_Mus1 SINE Alu 1 146 -2 8 1362 233 0 62 0 chr15 101971575 101971607 -1523367 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 8 1362 1185 96 95 6 chr15 101971631 101971810 -1523164 + B2_Mm2 SINE B2 1 195 0 8 1362 1181 233 20 77 chr15 101972990 101973380 -1521594 + RMER10B LTR ERVL 1 368 -30 8 1362 225 0 0 0 chr15 101973650 101973675 -1521299 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1363 338 242 99 0 chr15 101976176 101976267 -1518707 + ID_B1 SINE B4 91 190 -34 8 1363 287 309 92 67 chr15 101976292 101976531 -1518443 - RMER12 LTR ERVK -332 990 746 8 1363 204 122 0 0 chr15 101976959 101977000 -1517974 + (T)n Simple_repeat Simple_repeat 1 41 0 8 1363 1184 55 0 0 chr15 101977000 101977145 -1517829 - B1_Mus2 SINE Alu 0 147 3 8 1363 1564 63 0 0 chr15 101977146 101977336 -1517638 - B2_Mm1t SINE B2 0 193 4 8 1363 747 146 24 0 chr15 101977643 101977766 -1517208 - B1_Mus2 SINE Alu -12 135 10 8 1363 933 197 13 101 chr15 101977777 101978014 -1516960 - B3 SINE B2 0 216 1 8 1363 385 318 0 0 chr15 101978021 101978109 -1516865 - PB1D7 SINE Alu -31 89 2 8 1363 756 171 0 28 chr15 101978746 101978890 -1516084 + B1_Mur4 SINE Alu 11 150 0 8 1363 243 0 0 0 chr15 101978922 101978949 -1516025 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 1363 301 238 11 45 chr15 101979097 101979185 -1515789 + PB1 SINE Alu 41 125 -2 8 1363 327 331 103 0 chr15 101979355 101979500 -1515474 - MER5A DNA MER1_type -29 160 1 8 1363 645 288 26 69 chr15 101981621 101981852 -1513122 + ID_B1 SINE B4 3 223 -1 8 1363 755 71 202 9 chr15 101981854 101981968 -1513006 + B1_Mus1 SINE Alu 1 136 -12 8 1363 207 0 0 0 chr15 101981968 101981991 -1512983 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 8 1363 1181 48 55 0 chr15 101982002 101982015 -1512959 - B2_Mm2 SINE B2 -20 175 163 8 1363 369 0 0 0 chr15 101982015 101982056 -1512918 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 8 1363 1181 48 55 0 chr15 101982056 101982207 -1512767 - B2_Mm2 SINE B2 -33 162 3 8 1363 189 0 0 0 chr15 101982207 101982228 -1512746 + (TTA)n Simple_repeat Simple_repeat 3 23 0 8 1363 207 0 0 0 chr15 101982228 101982251 -1512723 + (TAG)n Simple_repeat Simple_repeat 1 23 0 8 1363 453 215 0 0 chr15 101982252 101982401 -1512573 + (TG)n Simple_repeat Simple_repeat 2 150 0 8 1363 328 344 52 7 chr15 101982408 101982563 -1512411 - RSINE1 SINE B4 0 165 4 8 1363 865 51 8 0 chr15 101982668 101982785 -1512189 - L1_Mus1 LINE L1 -1 6566 6449 8 1363 1186 54 0 39 chr15 101982856 101983009 -1511965 + B1_Mus2 SINE Alu 1 147 0 8 1363 305 75 0 107 chr15 101983012 101983047 -1511927 + A-rich Low_complexity Low_complexity 1 28 0 8 1363 547 198 34 8 chr15 101983047 101983164 -1511810 + PB1D9 SINE Alu 1 120 0 8 1363 305 75 0 107 chr15 101983164 101983203 -1511771 + A-rich Low_complexity Low_complexity 29 67 0 8 1363 217 234 29 59 chr15 101983331 101983399 -1511575 - PB1 SINE Alu -53 74 9 8 1363 216 135 0 0 chr15 101983832 101983869 -1511105 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 1363 461 256 0 22 chr15 101983932 101984116 -1510858 + (CA)n Simple_repeat Simple_repeat 1 180 0 8 1363 339 85 0 0 chr15 101984206 101984253 -1510721 + (CA)n Simple_repeat Simple_repeat 1 47 0 8 1363 258 271 50 50 chr15 101984876 101984977 -1509997 - B1F SINE Alu -48 101 1 8 1363 291 238 43 61 chr15 101984893 101984987 -1509987 - ID_B1 SINE B4 -60 164 77 8 1363 974 143 0 13 chr15 101984993 101985142 -1509832 - B1_Mur4 SINE Alu -2 148 2 8 1363 734 249 142 5 chr15 101985395 101985585 -1509389 - ID_B1 SINE B4 -5 219 4 8 1363 999 119 51 11 chr15 101985601 101985779 -1509195 - B2_Mm2 SINE B2 -10 185 1 8 1363 699 234 94 30 chr15 101985827 101986030 -1508944 - B3 SINE B2 0 216 1 8 1363 28 29 0 0 chr15 101986039 101986074 -1508900 + AT_rich Low_complexity Low_complexity 1 35 0 8 1363 420 338 25 29 chr15 101986115 101986389 -1508585 - RLTR15 LTR ERVK -12 347 75 8 1363 218 155 33 33 chr15 101986393 101986453 -1508521 + (TCTCTG)n Simple_repeat Simple_repeat 1 60 0 8 1363 297 272 75 60 chr15 101986453 101986586 -1508388 - RLTR15 LTR ERVK -222 137 3 8 1363 814 236 18 57 chr15 101986950 101987179 -1507795 + ID_B1 SINE B4 3 222 -2 8 1363 817 102 233 13 chr15 101987717 101987876 -1507098 + B2_Mm2 SINE B2 2 195 0 8 1363 288 0 0 0 chr15 101987888 101987920 -1507054 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 8 1363 275 233 167 0 chr15 101989565 101989625 -1505349 - ID4 SINE ID -13 70 1 8 1363 1037 98 106 39 chr15 101989654 101989834 -1505140 - B2_Mm2 SINE B2 -3 192 1 8 1363 209 161 0 35 chr15 101989893 101989951 -1505023 + T-rich Low_complexity Low_complexity 3 58 0 8 1363 585 179 27 0 chr15 101989953 101990065 -1504909 - B1_Mus2 SINE Alu 0 147 33 8 1363 38 0 0 0 chr15 101990161 101990199 -1504775 + AT_rich Low_complexity Low_complexity 1 38 0 8 1363 1235 48 0 0 chr15 101990200 101990347 -1504627 - B1_Mm SINE Alu 0 147 1 8 1363 1559 32 32 5 chr15 101990349 101990536 -1504438 - B2_Mm2 SINE B2 -2 193 2 8 1363 204 40 0 0 chr15 101991397 101991422 -1503552 + (TGGGGG)n Simple_repeat Simple_repeat 5 29 0 8 1363 462 248 111 15 chr15 101991665 101991800 -1503174 + B4 SINE B4 139 286 -6 8 1363 437 188 104 0 chr15 101991834 101991930 -1503044 + B1_Mur4 SINE Alu 44 149 -1 8 1363 1229 61 0 0 chr15 101991936 101992083 -1502891 + B1_Mus2 SINE Alu 1 147 0 8 1363 252 149 0 0 chr15 101992129 101992176 -1502798 + (ATGGTG)n Simple_repeat Simple_repeat 1 47 0 8 1363 281 230 97 0 chr15 101992197 101992272 -1502702 + ID4 SINE ID 17 97 -55 8 1363 1556 52 16 0 chr15 101993709 101993900 -1501074 + B2_Mm2 SINE B2 2 195 0 8 1363 209 128 26 0 chr15 101993947 101993986 -1500988 + T-rich Low_complexity Low_complexity 5 44 0 8 1363 294 29 0 0 chr15 101994033 101994068 -1500906 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 8 1363 463 281 7 29 chr15 101994075 101994214 -1500760 - B1_Mur1 SINE Alu -1 148 13 8 1363 288 77 0 0 chr15 101994287 101994326 -1500648 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 1363 417 244 192 70 chr15 101994405 101994577 -1500397 + B3A SINE B2 1 193 -5 8 1363 958 129 20 0 chr15 101994582 101994729 -1500245 + B1_Mur4 SINE Alu 1 150 0 8 1363 242 238 0 0 chr15 101994787 101994850 -1500124 + PB1D10 SINE Alu 46 108 -9 8 1363 649 222 40 17 chr15 101994915 101995089 -1499885 + MTE2b LTR MaLR 198 375 -4 8 1363 726 235 46 74 chr15 101995108 101995324 -1499650 - B3 SINE B2 -5 211 2 8 1363 411 160 0 0 chr15 101995325 101995400 -1499574 + CT-rich Low_complexity Low_complexity 2 76 0 8 1363 324 0 0 0 chr15 101995411 101995447 -1499527 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 1363 580 239 15 15 chr15 101995453 101995589 -1499385 - RSINE1 SINE B4 -28 137 2 8 1363 481 156 452 15 chr15 101995693 101995830 -1499144 + MTD LTR MaLR 14 210 -209 8 1363 392 305 28 67 chr15 101995787 101995840 -1499134 + ID_B1 SINE B4 53 224 0 8 1363 578 206 40 0 chr15 101995840 101995966 -1499008 + B1_Mur4 SINE Alu 20 150 0 8 1363 760 173 138 21 chr15 101995968 101996157 -1498817 + MTD LTR MaLR 196 406 -13 8 1363 246 326 89 64 chr15 101996299 101996456 -1498518 + RSINE1 SINE B4 2 162 -3 8 1363 306 0 0 0 chr15 101996456 101996490 -1498484 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 1363 395 216 14 0 chr15 101996493 101996567 -1498407 + ID2 SINE ID 3 77 -6 8 1363 398 215 13 0 chr15 101996588 101996667 -1498307 + B1_Mur3 SINE Alu 38 117 -32 8 1363 506 274 66 21 chr15 101996665 101996837 -1498137 - B3A SINE B2 -33 183 9 8 1363 228 282 12 49 chr15 101996894 101996910 -1498064 - B1F SINE Alu -1 148 137 8 1363 195 100 0 0 chr15 101996910 101996940 -1498034 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 1363 228 282 12 49 chr15 101996940 101997005 -1497969 - B1F SINE Alu -13 136 71 8 1363 587 134 10 30 chr15 101997029 101997129 -1497845 - B1_Mur4 SINE Alu 0 150 53 8 1363 359 328 71 8 chr15 101997127 101997253 -1497721 - RSINE1 SINE B4 -4 161 28 8 1363 206 32 32 0 chr15 101997731 101997762 -1497212 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 8 1363 282 344 11 0 chr15 101998214 101998307 -1496667 - MER5A DNA MER1_type -83 106 13 8 1363 306 241 76 0 chr15 101998316 101998395 -1496579 + B3A SINE B2 1 85 -113 8 1363 284 243 97 53 chr15 101998395 101998429 -1496545 + B4A SINE B4 1 118 -174 9 1363 297 309 61 20 chr15 101998531 101998630 -1496344 - RSINE1 SINE B4 -61 104 2 9 1363 326 61 0 20 chr15 101998780 101998830 -1496144 + (CA)n Simple_repeat Simple_repeat 1 49 0 9 1363 2708 96 115 10 chr15 101999024 101999423 -1495551 - BGLII_B LTR ERVK 0 441 1 9 1363 1319 144 175 0 chr15 101999468 101999725 -1495249 + MTC LTR MaLR 10 311 -110 9 1363 251 284 15 15 chr15 101999719 101999785 -1495189 + RSINE1 SINE B4 15 80 -85 9 1363 1603 28 23 9 chr15 101999785 102000000 -1494974 - MTA_Mm LTR MaLR 0 396 179 9 1363 1407 34 0 0 chr15 102000000 102000178 -1494796 - MTA_Mm LTR MaLR -218 178 1 1 1363 233 149 21 0 chr15 102000187 102000234 -1494740 + RSINE1 SINE B4 85 132 -33 2 1363 808 297 25 7 chr15 102000491 102000776 -1494198 + B4A SINE B4 1 290 -2 3 1363 311 257 6 191 chr15 102000838 102000905 -1494069 + MTD LTR MaLR 1 64 -355 4 1363 296 291 133 8 chr15 102000905 102001033 -1493941 + B1_Mur1 SINE Alu 1 144 -5 5 1363 311 257 6 191 chr15 102001033 102001107 -1493867 + MTD LTR MaLR 65 115 -304 4 1363 1012 223 5 0 chr15 102001107 102001309 -1493665 - B3 SINE B2 -13 203 1 6 1363 311 257 6 191 chr15 102001309 102001339 -1493635 + MTD LTR MaLR 116 141 -278 4 1363 400 274 122 9 chr15 102001818 102002032 -1492942 - L1M4 LINE L1 -515 5663 5426 7 1363 721 108 18 0 chr15 102002032 102002143 -1492831 - B1_Mur3 SINE Alu 0 149 37 8 1363 383 276 95 24 chr15 102002243 102002369 -1492605 - B1F2 SINE Alu -2 147 13 9 1363 433 250 49 12 chr15 102002380 102002542 -1492432 - L1M4 LINE L1 -737 5441 5274 7 1363 387 324 7 47 chr15 102002543 102002679 -1492295 + ID_B1 SINE B4 82 213 -11 1 1363 890 155 14 0 chr15 102002679 102002827 -1492147 + B1_Mur4 SINE Alu 1 150 0 1 1363 857 57 186 0 chr15 102002827 102002951 -1492023 + B1_Mus2 SINE Alu 1 147 0 1 1363 387 324 7 47 chr15 102002951 102002962 -1492012 + ID_B1 SINE B4 214 223 -1 1 1363 219 146 0 0 chr15 102002962 102003003 -1491971 + (A)n Simple_repeat Simple_repeat 1 41 0 1 1363 225 254 132 0 chr15 102003036 102003150 -1491824 - L1M4 LINE L1 -1711 4435 4307 7 1363 404 333 42 65 chr15 102003160 102003375 -1491599 - ID_B1 SINE B4 -9 215 6 1 1363 204 40 0 0 chr15 102003375 102003400 -1491574 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 1363 183 80 0 0 chr15 102003564 102003589 -1491385 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1363 820 58 0 16 chr15 102003589 102003712 -1491262 - B1_Mus2 SINE Alu 0 147 27 1 1363 299 263 39 39 chr15 102003712 102003815 -1491159 - L1M4 LINE L1 -1980 4166 4064 7 1363 237 65 0 0 chr15 102003862 102003893 -1491081 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 1363 362 391 73 0 chr15 102003893 102003917 -1491057 - MLT2B2 LTR ERVL -21 533 510 1 1363 1300 67 0 33 chr15 102003917 102004101 -1490873 - B2_Mm2 SINE B2 -16 179 2 2 1363 534 308 74 14 chr15 102004101 102004318 -1490656 - MLT2B2 LTR ERVL -57 458 229 1 1363 523 200 79 8 chr15 102004534 102004660 -1490314 - MLT2B2 LTR ERVL -378 137 3 1 1363 1081 99 64 0 chr15 102004661 102004833 -1490141 + B2_Mm2 SINE B2 2 184 -11 2 1363 263 209 65 11 chr15 102004848 102004940 -1490034 + L1M5 LINE L1 3230 3326 -2820 2 1363 539 238 0 0 chr15 102005143 102005248 -1489726 - RSINE1 SINE B4 -57 108 4 2 1363 21 0 0 0 chr15 102005252 102005273 -1489701 + AT_rich Low_complexity Low_complexity 1 21 0 2 1363 629 238 13 33 chr15 102005273 102005425 -1489549 - B1_Mur1 SINE Alu 0 149 1 2 1363 249 277 55 63 chr15 102005498 102005625 -1489349 - RLTR25B LTR ERVK -467 561 436 2 1363 605 164 43 0 chr15 102005516 102005632 -1489342 - B1F2 SINE Alu 0 149 29 2 1363 425 311 18 36 chr15 102005721 102005888 -1489086 - RSINE1 SINE B4 0 165 2 2 1363 762 136 7 54 chr15 102005958 102006106 -1488868 + B1_Mur2 SINE Alu 4 144 -5 2 1363 310 202 61 37 chr15 102006735 102006817 -1488157 + PB1D10 SINE Alu 34 117 0 3 1363 249 326 90 0 chr15 102006822 102006911 -1488063 + PB1D10 SINE Alu 1 97 -20 3 1363 264 59 0 0 chr15 102006913 102006947 -1488027 + (CAGA)n Simple_repeat Simple_repeat 2 35 0 3 1363 464 213 69 30 chr15 102006956 102007087 -1487887 + B1F SINE Alu 6 141 -8 3 1363 400 172 22 33 chr15 102007163 102007253 -1487721 - PB1D9 SINE Alu -15 105 17 3 1363 27 73 0 0 chr15 102007675 102007730 -1487244 + AT_rich Low_complexity Low_complexity 1 55 0 3 1363 450 175 242 0 chr15 102007737 102007857 -1487117 - B1_Mur3 SINE Alu 0 149 1 3 1363 243 88 0 0 chr15 102009079 102009113 -1485861 + (GGAA)n Simple_repeat Simple_repeat 1 34 0 3 1363 181 256 0 0 chr15 102010670 102010709 -1484265 - MIRb SINE MIR -206 62 24 3 1363 934 259 16 65 chr15 102010725 102011031 -1483943 + B4 SINE B4 2 292 0 3 1363 368 92 286 13 chr15 102011110 102011187 -1483787 - BC1_Mm scRNA scRNA -54 98 1 4 1363 312 214 0 87 chr15 102011256 102011348 -1483626 + L1M4 LINE L1 3481 3564 -2582 4 1363 761 227 34 28 chr15 102011451 102011628 -1483346 + B3 SINE B2 26 203 -13 4 1363 718 225 0 0 chr15 102011891 102012033 -1482941 + B1_Mur2 SINE Alu 1 142 -7 4 1363 357 290 28 9 chr15 102012064 102012172 -1482802 + PB1D10 SINE Alu 2 111 -6 4 1363 482 229 89 30 chr15 102012349 102012484 -1482490 + B1_Mur1 SINE Alu 7 149 0 4 1363 666 247 15 73 chr15 102012517 102012722 -1482252 + B3A SINE B2 6 198 0 4 1363 1120 48 7 0 chr15 102012746 102012891 -1482083 + B1_Mus1 SINE Alu 1 146 -2 4 1363 1564 31 5 0 chr15 102012897 102013088 -1481886 + B2_Mm1t SINE B2 2 193 0 4 1363 288 0 0 0 chr15 102013098 102013130 -1481844 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 4 1363 632 244 0 15 chr15 102013249 102013382 -1481592 + RSINE1 SINE B4 25 155 -10 5 1363 471 183 0 0 chr15 102013375 102013457 -1481517 + PB1D7 SINE Alu 34 115 -5 5 1363 299 278 130 86 chr15 102013557 102013912 -1481062 + MLT1A1 LTR MaLR 25 404 -4 5 1363 703 73 0 0 chr15 102013916 102014012 -1480962 + B1_Mus2 SINE Alu 52 147 0 5 1363 382 216 41 0 chr15 102014056 102014153 -1480821 + L1M4 LINE L1 5704 5804 -379 4 1363 555 243 0 0 chr15 102014488 102014661 -1480313 + (TG)n Simple_repeat Simple_repeat 2 174 0 5 1363 796 252 35 0 chr15 102014661 102014863 -1480111 + ID_B1 SINE B4 4 212 -12 5 1363 477 0 0 0 chr15 102014863 102014916 -1480058 + (GA)n Simple_repeat Simple_repeat 2 54 0 5 1363 367 230 46 0 chr15 102014937 102015024 -1479950 + L1MD LINE L1 5488 5578 -664 5 1363 192 179 0 0 chr15 102015149 102015188 -1479786 + (ATGGTG)n Simple_repeat Simple_repeat 4 42 0 5 1363 727 198 110 6 chr15 102015211 102015374 -1479600 + B3 SINE B2 37 216 0 5 1363 307 200 17 0 chr15 102015411 102015471 -1479503 + B3 SINE B2 8 68 -148 6 1363 1142 62 7 0 chr15 102015471 102015617 -1479357 + B1_Mus1 SINE Alu 2 148 0 6 1363 456 293 60 0 chr15 102015654 102015787 -1479187 + B1F1 SINE Alu 6 146 -3 6 1363 281 278 91 20 chr15 102015835 102015934 -1479040 - MIR SINE MIR -47 215 110 6 1363 217 116 47 0 chr15 102016721 102016764 -1478210 + T-rich Low_complexity Low_complexity 1 45 0 6 1363 198 0 0 0 chr15 102017037 102017059 -1477915 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 6 1363 439 165 311 0 chr15 102017061 102017164 -1477810 - B1_Mur3 SINE Alu -14 135 1 6 1363 269 180 95 32 chr15 102017216 102017279 -1477695 - MER5A1 DNA MER1_type -80 86 20 6 1363 884 51 0 0 chr15 102019769 102019886 -1475088 - B1_Mus2 SINE Alu -1 146 30 6 1363 720 256 55 15 chr15 102019891 102020093 -1474881 - ID_B1 SINE B4 -6 218 9 6 1363 351 267 34 17 chr15 102020700 102020818 -1474156 + PB1D7 SINE Alu 1 120 0 7 1363 706 170 28 43 chr15 102020852 102020993 -1473981 + B1_Mus1 SINE Alu 10 148 0 7 1363 607 298 7 0 chr15 102020996 102021147 -1473827 + RSINE1 SINE B4 8 159 -6 7 1363 715 160 30 0 chr15 102021213 102021344 -1473630 + B1_Mur4 SINE Alu 7 141 -9 7 1363 548 298 0 14 chr15 102021355 102021498 -1473476 + B1F SINE Alu 1 141 -8 7 1363 923 18 0 9 chr15 102021498 102021612 -1473362 + (GGGGA)n Simple_repeat Simple_repeat 3 115 0 7 1363 223 344 60 21 chr15 102022792 102023027 -1471947 - L2 LINE L2 -2085 1334 1091 7 1363 626 209 23 8 chr15 102023738 102023868 -1471106 + B1_Mur2 SINE Alu 1 132 -17 7 1363 651 259 142 0 chr15 102024166 102024398 -1470576 - L1MB7 LINE L1 0 6184 5920 7 1363 493 212 8 50 chr15 102024408 102024527 -1470447 + B3A SINE B2 1 114 -84 7 1363 919 171 192 6 chr15 102024556 102024738 -1470236 - B3 SINE B2 0 216 1 8 1363 1599 271 24 13 chr15 102024748 102025204 -1469770 - L1MB7 LINE L1 -261 5923 5463 7 1363 525 279 29 71 chr15 102025260 102025414 -1469560 + RSINE1 SINE B4 3 150 -15 8 1363 195 42 0 0 chr15 102025414 102025438 -1469536 + (TC)n Simple_repeat Simple_repeat 1 24 0 8 1363 525 279 29 71 chr15 102025438 102025453 -1469521 + RSINE1 SINE B4 151 165 0 8 1363 456 238 0 0 chr15 102025479 102025647 -1469327 + (CA)n Simple_repeat Simple_repeat 1 168 0 8 1363 401 272 8 8 chr15 102025662 102025788 -1469186 + (CA)n Simple_repeat Simple_repeat 1 126 0 8 1363 864 57 24 0 chr15 102025824 102025948 -1469026 + B1_Mus1 SINE Alu 22 148 0 8 1363 583 301 12 41 chr15 102025966 102026136 -1468838 + RSINE1 SINE B4 1 165 0 8 1363 725 151 79 7 chr15 102026170 102026310 -1468664 - B1_Mur4 SINE Alu 0 150 1 8 1363 383 0 21 0 chr15 102026486 102026533 -1468441 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 1363 249 358 9 0 chr15 102026656 102026765 -1468209 - PB1 SINE Alu -17 110 1 8 1363 324 284 70 51 chr15 102026836 102026861 -1468113 + ID_B1 SINE B4 66 224 0 8 1363 517 261 46 8 chr15 102026861 102026992 -1467982 + B1F SINE Alu 14 149 0 9 1363 536 138 10 31 chr15 102027769 102027866 -1467108 - B1_Mus2 SINE Alu -1 146 52 9 1363 377 304 186 5 chr15 102028151 102028372 -1466602 - B4A SINE B4 -28 264 4 9 1363 322 251 89 221 chr15 102028387 102028524 -1466450 - MTE2a LTR MaLR -20 359 213 9 1363 736 246 77 0 chr15 102028524 102028719 -1466255 + B3 SINE B2 1 210 -6 9 1363 322 269 89 209 chr15 102028719 102028915 -1466059 - MTE2a LTR MaLR -167 212 57 9 1363 534 177 15 37 chr15 102029067 102029188 -1465786 + B1_Mur1 SINE Alu 3 149 0 9 1363 198 0 0 0 chr15 102029205 102029227 -1465747 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 9 1363 228 200 273 15 chr15 102029236 102029302 -1465672 + ID4_ SINE ID 1 83 0 9 1363 461 209 25 76 chr15 102029905 102030024 -1464950 + RSINE1 SINE B4 10 122 -43 9 1363 698 170 22 22 chr15 102030031 102030169 -1464805 + B1_Mur4 SINE Alu 13 150 0 9 1363 1053 99 79 18 chr15 102030246 102030393 -1464581 + B2_Mm2 SINE B2 2 161 -34 1 1363 306 0 0 0 chr15 102030393 102030427 -1464547 + (GAAA)n Simple_repeat Simple_repeat 1 34 0 1 1363 1439 48 27 0 chr15 102030428 102030616 -1464358 + B2_Mm1a SINE B2 1 193 0 1 1363 1053 99 79 18 chr15 102030616 102030631 -1464343 + B2_Mm2 SINE B2 162 176 -19 1 1363 287 146 18 0 chr15 102030631 102030686 -1464288 + GA-rich Low_complexity Low_complexity 1 56 0 1 1363 326 197 373 0 chr15 102030835 102030977 -1463997 + B3 SINE B2 3 197 -19 1 1363 328 310 44 0 chr15 102031257 102031370 -1463604 - PB1 SINE Alu -9 118 1 1 1363 319 225 21 63 chr15 102031439 102031534 -1463440 + PB1D10 SINE Alu 27 117 0 1 1363 1292 85 32 5 chr15 102031670 102031859 -1463115 + B2_Mm2 SINE B2 1 194 -1 1 1363 914 193 17 98 chr15 102031939 102032174 -1462800 + B3 SINE B2 1 216 0 1 1363 1008 65 232 0 chr15 102032312 102032467 -1462507 + B2_Mm1a SINE B2 1 191 -2 1 1363 555 211 35 0 chr15 102032494 102032608 -1462366 - B1_Mur1 SINE Alu -27 122 5 1 1363 1159 68 0 0 chr15 102032639 102032787 -1462187 - B1_Mus1 SINE Alu 0 148 1 1 1363 370 309 156 25 chr15 102032882 102033081 -1461893 - B4A SINE B4 -67 225 1 1 1363 276 284 6 45 chr15 102034199 102034376 -1460598 + (CGGG)n Simple_repeat Simple_repeat 3 172 0 1 1363 30 27 0 0 chr15 102034378 102034415 -1460559 + GC_rich Low_complexity Low_complexity 1 37 0 1 1363 311 328 7 64 chr15 102035389 102035529 -1459445 - L2b LINE L2 -10 3365 3234 1 1363 359 252 18 55 chr15 102035653 102035762 -1459212 - L2c LINE L2 -11 3376 3272 1 1363 349 307 116 18 chr15 102036508 102036694 -1458280 - MIRb SINE MIR -23 245 25 1 1363 822 174 21 7 chr15 102036949 102037094 -1457880 + B1_Mus2 SINE Alu 1 147 0 1 1363 1126 69 0 0 chr15 102037138 102037282 -1457692 + B1_Mus2 SINE Alu 4 147 0 1 1363 191 36 0 35 chr15 102037283 102037312 -1457662 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1 1363 319 226 90 1 chr15 102037503 102037598 -1457376 + B3A SINE B2 70 171 -45 1 1363 399 41 0 0 chr15 102037598 102037647 -1457327 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1363 294 305 69 15 chr15 102037647 102037681 -1457293 + B3 SINE B2 172 206 -10 1 1363 412 275 33 0 chr15 102037682 102037802 -1457172 + RSINE1 SINE B4 2 125 -40 1 1363 474 107 95 0 chr15 102039897 102039981 -1454993 - B1_Mur2 SINE Alu 0 149 58 1 1363 195 100 0 0 chr15 102040070 102040100 -1454874 + (TTG)n Simple_repeat Simple_repeat 2 31 0 1 1363 975 97 14 14 chr15 102040101 102040247 -1454727 - B1_Mus2 SINE Alu -1 146 1 1 1363 2530 58 9 0 chr15 102040267 102040597 -1454377 - L1Md_F2 LINE L1 -12 6570 6238 1 1363 330 45 0 0 chr15 102040920 102040964 -1454010 + (TCC)n Simple_repeat Simple_repeat 3 46 0 1 1363 413 252 27 0 chr15 102041092 102041203 -1453771 + PB1D10 SINE Alu 1 114 -3 1 1363 334 228 10 71 chr15 102041493 102041592 -1453382 - HAL1-2a_MD LINE L1 -572 2452 2360 1 1363 457 297 35 35 chr15 102041592 102041735 -1453239 - RSINE1 SINE B4 -12 153 11 1 1363 309 109 0 0 chr15 102041756 102041802 -1453172 + (T)n Simple_repeat Simple_repeat 1 46 0 1 1363 1147 68 0 0 chr15 102041802 102041948 -1453026 - B1_Mus2 SINE Alu 0 147 2 1 1363 3343 80 6 20 chr15 102041955 102042453 -1452521 - L1_Mus3 LINE L1 0 6638 6148 1 1363 882 230 0 73 chr15 102042463 102042697 -1452277 - ID_B1 SINE B4 -7 217 1 1 1363 606 245 0 26 chr15 102042726 102042877 -1452097 - B1_Mur2 SINE Alu -1 148 2 1 1363 180 0 0 0 chr15 102044133 102044153 -1450821 + (GTCTG)n Simple_repeat Simple_repeat 2 21 0 1 1363 252 0 0 0 chr15 102046216 102046244 -1448730 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1363 216 237 0 44 chr15 102048051 102048188 -1446786 + CT-rich Low_complexity Low_complexity 1 131 0 1 1363 1290 139 42 0 chr15 102048499 102048715 -1446259 + URR1B DNA MER1_type 1 225 0 1 1363 405 58 0 0 chr15 102049157 102049209 -1445765 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 1363 380 20 20 0 chr15 102049209 102049258 -1445716 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1363 1128 75 0 0 chr15 102049321 102049468 -1445506 + B1_Mus1 SINE Alu 2 148 0 1 1363 207 171 0 0 chr15 102049582 102049617 -1445357 + (GCTG)n Simple_repeat Simple_repeat 2 36 0 1 1363 371 229 37 28 chr15 102050129 102050237 -1444737 - PB1D10 SINE Alu -6 111 3 1 1363 446 167 0 106 chr15 102050295 102050389 -1444585 + B1_Mm SINE Alu 64 147 0 1 1363 1594 27 0 0 chr15 102050392 102050580 -1444394 + B2_Mm1a SINE B2 2 189 -4 1 1363 1274 48 84 0 chr15 102050681 102050847 -1444127 + B2_Mm2 SINE B2 2 181 -14 1 1363 301 292 0 0 chr15 102050983 102051055 -1443919 + ID2 SINE ID 4 75 -8 1 1363 656 221 0 8 chr15 102051075 102051198 -1443776 + B1F2 SINE Alu 10 131 -18 1 1363 1022 64 43 0 chr15 102051198 102051338 -1443636 - B1_Mus1 SINE Alu -1 147 2 1 1363 243 88 0 0 chr15 102051398 102051432 -1443542 + (A)n Simple_repeat Simple_repeat 1 34 0 1 1363 1207 105 11 5 chr15 102051507 102051698 -1443276 + B2_Mm1a SINE B2 1 192 -1 1 1363 21 71 0 0 chr15 102051783 102051825 -1443149 + AT_rich Low_complexity Low_complexity 1 42 0 1 1363 859 207 13 98 chr15 102051825 102052050 -1442924 - B3 SINE B2 -7 209 4 1 1363 905 81 0 0 chr15 102052089 102052213 -1442761 + B1_Mus2 SINE Alu 22 145 -2 1 1363 240 86 0 0 chr15 102052213 102052248 -1442726 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1363 277 334 14 0 chr15 102052257 102052342 -1442632 + ID4_ SINE ID 2 88 -64 1 1363 1031 110 81 0 chr15 102053341 102053514 -1441460 - B2_Mm2 SINE B2 -2 193 7 1 1363 765 145 50 7 chr15 102054261 102054400 -1440574 - B1_Mus1 SINE Alu -2 146 2 1 1363 387 141 0 0 chr15 102055630 102055694 -1439280 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 1363 204 67 0 0 chr15 102056021 102056051 -1438923 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1363 1134 42 21 0 chr15 102056051 102056195 -1438779 - B1_Mm SINE Alu 0 147 1 1 1363 1378 81 0 41 chr15 102056231 102056425 -1438549 - B2_Mm2 SINE B2 -8 187 2 1 1363 737 188 0 0 chr15 102056699 102056827 -1438147 - B1_Mur2 SINE Alu -9 140 13 1 1363 392 329 0 41 chr15 102056827 102056845 -1438129 - ID_B1 SINE B4 -9 215 76 1 1363 391 282 34 0 chr15 102056840 102056957 -1438017 + MLT1A LTR MaLR 38 158 -216 1 1363 1037 208 55 0 chr15 102056967 102057169 -1437805 + B3 SINE B2 1 213 -3 1 1363 1405 99 16 0 chr15 102057188 102057379 -1437595 + B2_Mm2 SINE B2 2 195 0 1 1363 247 353 19 10 chr15 102057448 102057551 -1437423 + MLT1A LTR MaLR 205 308 -57 1 1363 1055 196 9 78 chr15 102058309 102058541 -1436433 + B3 SINE B2 1 216 0 1 1363 631 187 8 8 chr15 102058737 102058861 -1436113 + B1_Mur1 SINE Alu 26 149 0 1 1363 667 173 81 2 chr15 102059228 102059375 -1435599 - B3 SINE B2 0 198 40 1 1363 426 203 130 123 chr15 102059624 102059716 -1435258 - B1F1 SINE Alu -1 148 46 1 1363 276 102 0 0 chr15 102059716 102059765 -1435209 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1363 1074 93 0 0 chr15 102059765 102059905 -1435069 - B1_Mus1 SINE Alu -7 141 2 1 1363 426 203 130 123 chr15 102059905 102059957 -1435017 - B1F1 SINE Alu -104 45 3 1 1363 325 291 28 28 chr15 102060036 102060142 -1434832 + B1_Mur2 SINE Alu 1 106 -43 1 1363 560 161 3 5 chr15 102060064 102060171 -1434803 - B1_Mus1 SINE Alu -43 106 1 1 1363 1409 104 16 0 chr15 102060363 102060555 -1434419 + B2_Mm2 SINE B2 1 195 0 1 1363 552 204 28 0 chr15 102060624 102060732 -1434242 + B1_Mur1 SINE Alu 24 134 -15 1 1363 554 269 27 33 chr15 102060970 102061120 -1433854 - B3 SINE B2 -67 149 1 1 1363 249 159 0 0 chr15 102061810 102061854 -1433120 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1363 284 333 14 69 chr15 102062559 102062704 -1432270 - MIRb SINE MIR -119 149 13 1 1363 225 0 0 0 chr15 102062947 102062972 -1432002 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1 1363 252 171 0 0 chr15 102063267 102063308 -1431666 + MIR SINE MIR 28 68 -194 1 1363 988 207 19 14 chr15 102063357 102063568 -1431406 + URR1B DNA MER1_type 1 212 -13 1 1363 277 325 0 0 chr15 102063665 102063748 -1431226 + ID4 SINE ID 6 88 -64 1 1363 1481 54 16 16 chr15 102063788 102063976 -1430998 - B2_Mm1t SINE B2 -4 189 2 1 1363 836 69 9 0 chr15 102064118 102064234 -1430740 + (CTATG)n Simple_repeat Simple_repeat 1 117 0 1 1363 331 214 214 0 chr15 102064897 102064995 -1429979 + PB1D7 SINE Alu 1 119 -1 1 1363 1496 54 43 0 chr15 102067012 102067198 -1427776 - B2_Mm2 SINE B2 0 195 2 1 1363 277 299 30 20 chr15 102067207 102067306 -1427668 - PB1 SINE Alu -2 125 26 1 1363 836 201 15 56 chr15 102067326 102067521 -1427453 - B2_Mm2 SINE B2 -7 188 2 1 1363 239 0 32 0 chr15 102067553 102067584 -1427390 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 1363 742 185 6 88 chr15 102067594 102067754 -1427220 - B1_Mur3 SINE Alu -1 148 2 1 1363 264 308 7 113 chr15 102067754 102067783 -1427191 - B4 SINE B4 -216 76 64 1 1363 347 237 40 81 chr15 102067786 102067910 -1427064 + RSINE1 SINE B4 12 130 -35 1 1363 198 71 0 0 chr15 102067980 102068008 -1426966 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 1 1363 183 80 0 0 chr15 102068020 102068045 -1426929 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1363 1206 68 0 13 chr15 102068045 102068195 -1426779 - B1_Mus1 SINE Alu 0 148 1 1 1363 547 193 97 0 chr15 102068197 102068311 -1426663 - B1_Mur4 SINE Alu -1 149 25 2 1363 304 239 19 48 chr15 102068433 102068560 -1426414 - PB1 SINE Alu -23 126 1 2 1363 215 293 0 71 chr15 102068595 102068635 -1426339 - MIR SINE MIR -71 191 154 2 1363 1104 108 0 0 chr15 102068635 102068783 -1426191 + B1_Mus1 SINE Alu 1 148 0 2 1363 215 293 0 71 chr15 102068783 102068841 -1426133 - MIR SINE MIR -109 153 100 2 1363 1477 74 26 5 chr15 102068841 102069031 -1425943 + B2_Mm2 SINE B2 2 195 0 2 1363 276 100 0 0 chr15 102070768 102070808 -1424166 + (T)n Simple_repeat Simple_repeat 1 40 0 2 1363 1269 34 0 0 chr15 102070808 102070955 -1424019 - B1_Mm SINE Alu 0 147 1 2 1363 212 59 29 0 chr15 102071729 102071763 -1423211 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1363 764 151 8 0 chr15 102071990 102072116 -1422858 - B1_Mur3 SINE Alu 0 149 23 2 1363 506 275 147 25 chr15 102072116 102072188 -1422786 - ID_B1 SINE B4 0 224 3 2 1363 927 225 5 5 chr15 102072726 102072914 -1422060 + B3 SINE B2 15 202 -14 2 1363 279 0 0 0 chr15 102075197 102075228 -1419746 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1363 216 0 0 0 chr15 102075795 102075819 -1419155 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 1363 24 0 0 0 chr15 102076569 102076593 -1418381 + GC_rich Low_complexity Low_complexity 1 24 0 2 1363 219 167 0 20 chr15 102078255 102078304 -1416670 + (CCGG)n Simple_repeat Simple_repeat 1 48 0 2 1363 180 0 0 0 chr15 102079522 102079542 -1415432 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1363 405 0 0 0 chr15 102079588 102079633 -1415341 + (TC)n Simple_repeat Simple_repeat 1 45 0 2 1363 494 163 44 25 chr15 102081858 102081977 -1412997 - PB1D7 SINE Alu -29 118 8 2 1363 251 222 0 100 chr15 102083487 102083557 -1411417 + ID4 SINE ID 7 69 -14 2 1363 230 275 69 81 chr15 102083557 102083574 -1411400 + ID_B1 SINE B4 7 92 -132 2 1363 314 214 0 14 chr15 102083584 102083655 -1411319 + PB1D9 SINE Alu 51 120 0 2 1363 216 200 22 0 chr15 102083655 102083700 -1411274 + GA-rich Low_complexity Low_complexity 3 48 0 2 1363 1079 91 7 0 chr15 102083757 102083900 -1411074 - B1_Mus1 SINE Alu 0 148 5 2 1363 348 317 108 30 chr15 102083990 102084156 -1410818 + MIR SINE MIR 40 218 -44 2 1363 965 46 122 0 chr15 102084166 102084297 -1410677 + B1_Mus2 SINE Alu 1 147 0 2 1363 2107 79 38 38 chr15 102084841 102085157 -1409817 + L1Md_F2 LINE L1 6267 6582 0 2 1363 441 0 0 0 chr15 102086575 102086624 -1408350 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1363 246 139 14 27 chr15 102087929 102088003 -1406971 + CT-rich Low_complexity Low_complexity 1 73 0 2 1363 235 238 68 45 chr15 102090121 102090209 -1404765 + PB1D10 SINE Alu 5 94 -23 2 1363 331 272 174 10 chr15 102090220 102090467 -1404507 + L1M2 LINE L1 5181 5467 -773 2 1363 247 284 43 43 chr15 102090519 102090611 -1404363 + B3 SINE B2 125 216 0 2 1363 1239 54 0 0 chr15 102091015 102091163 -1403811 + B1_Mus1 SINE Alu 1 148 0 2 1363 225 154 0 0 chr15 102091163 102091202 -1403772 + A-rich Low_complexity Low_complexity 1 39 0 2 1363 228 162 0 0 chr15 102091225 102091262 -1403712 + B1_Mus2 SINE Alu 73 109 -38 2 1363 1166 89 0 0 chr15 102091299 102091445 -1403529 - B1_Mus1 SINE Alu 0 148 3 2 1363 844 27 9 0 chr15 102091491 102091602 -1403372 - B1_Mus2 SINE Alu 0 147 36 2 1363 295 132 74 62 chr15 102091533 102091614 -1403360 - RLTR25B LTR ERVK -519 509 428 2 1363 190 0 143 0 chr15 102091618 102091653 -1403321 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 2 1363 1214 62 0 0 chr15 102091679 102091824 -1403150 + B1_Mm SINE Alu 3 147 0 2 1363 207 0 0 0 chr15 102091825 102091848 -1403126 + (CAAAAA)n Simple_repeat Simple_repeat 1 23 0 2 1363 222 37 0 0 chr15 102091846 102091873 -1403101 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2 1363 192 77 0 0 chr15 102091873 102091899 -1403075 + (AGGGGG)n Simple_repeat Simple_repeat 3 28 0 2 1363 486 254 38 45 chr15 102091901 102092033 -1402941 - B3 SINE B2 -85 131 1 2 1363 229 340 125 25 chr15 102092591 102092751 -1402223 - L2b LINE L2 -1 3374 3199 2 1363 247 384 14 63 chr15 102093321 102093463 -1401511 - ID_B1 SINE B4 -82 142 8 2 1363 658 71 30 20 chr15 102093900 102094000 -1400974 - B1_Mur4 SINE Alu -9 141 41 2 1363 438 294 53 44 chr15 102094116 102094322 -1400652 - MIRb SINE MIR -8 260 53 2 1363 237 284 26 39 chr15 102094430 102094507 -1400467 - L2c LINE L2 -8 3379 3304 2 1363 362 231 205 41 chr15 102094508 102094630 -1400344 - ID_B1 SINE B4 -40 184 43 2 1363 535 287 0 34 chr15 102094715 102094863 -1400111 + ID_B1 SINE B4 81 223 -1 2 1363 1122 95 0 7 chr15 102094869 102095018 -1399956 + B1_Mus1 SINE Alu 1 148 0 2 1363 243 98 0 47 chr15 102095021 102095085 -1399889 + (CAAAA)n Simple_repeat Simple_repeat 2 62 0 2 1363 555 249 87 74 chr15 102095094 102095262 -1399712 + B3A SINE B2 4 160 -33 2 1363 204 40 0 0 chr15 102095262 102095287 -1399687 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1363 271 291 40 101 chr15 102095287 102095317 -1399657 + B2_Mm1t SINE B2 161 190 -3 2 1363 1256 47 0 0 chr15 102095322 102095470 -1399504 + B1_Mus1 SINE Alu 1 148 0 2 1363 225 0 0 0 chr15 102095473 102095498 -1399476 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1363 706 116 27 0 chr15 102095501 102095613 -1399361 + B2_Mm2 SINE B2 1 115 -80 2 1363 420 221 57 9 chr15 102095614 102095719 -1399255 + RSINE1 SINE B4 11 120 -45 2 1363 494 261 6 0 chr15 102095844 102096020 -1398954 + (TG)n Simple_repeat Simple_repeat 1 177 0 2 1363 748 289 20 0 chr15 102096088 102096289 -1398685 - B3 SINE B2 0 216 12 2 1363 835 138 14 0 chr15 102096324 102096462 -1398512 - B1_Mus1 SINE Alu 0 148 9 2 1363 756 255 108 38 chr15 102096467 102096679 -1398295 - B4 SINE B4 -63 229 3 2 1363 1403 90 5 16 chr15 102096739 102096931 -1398043 + B2_Mm2 SINE B2 1 190 -5 2 1363 1114 229 19 5 chr15 102097237 102097448 -1397526 - B3 SINE B2 -1 215 2 2 1363 399 236 21 59 chr15 102097492 102097634 -1397340 - PB1D10 SINE Alu 0 149 10 2 1363 538 257 37 0 chr15 102097695 102097831 -1397143 + ID_B1 SINE B4 84 224 0 2 1363 1171 55 0 7 chr15 102097833 102097981 -1396993 + B1_Mm SINE Alu 1 147 0 2 1363 559 153 20 0 chr15 102098120 102098218 -1396756 + PB1D9 SINE Alu 9 108 -12 2 1363 549 0 0 0 chr15 102098289 102098350 -1396624 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 1363 993 75 0 0 chr15 102098355 102098489 -1396485 - B1_Mm SINE Alu -5 142 9 2 1363 1202 62 0 0 chr15 102098501 102098646 -1396328 - B1_Mm SINE Alu -1 146 2 2 1363 466 326 14 0 chr15 102098750 102098888 -1396086 - RSINE1 SINE B4 -24 141 2 2 1363 767 217 120 0 chr15 102098918 102099102 -1395872 - B3 SINE B2 0 216 11 2 1363 462 114 0 0 chr15 102099107 102099177 -1395797 + (TTCC)n Simple_repeat Simple_repeat 4 73 0 2 1363 1137 108 40 75 chr15 102099177 102099377 -1395597 - B2_Mm1t SINE B2 0 193 1 2 1363 741 139 150 118 chr15 102099450 102099637 -1395337 - B2_Mm2 SINE B2 0 195 3 2 1363 841 161 79 18 chr15 102099644 102099809 -1395165 - B2_Mm2 SINE B2 -19 176 2 2 1363 1390 84 10 21 chr15 102099820 102100014 -1394960 - B2_Mm1t SINE B2 0 193 2 2 1363 219 69 0 0 chr15 102100922 102100951 -1394023 + (CCCCCA)n Simple_repeat Simple_repeat 6 34 0 2 1363 207 258 40 46 chr15 102101109 102101284 -1393690 + (CCCTG)n Simple_repeat Simple_repeat 5 178 0 2 1363 464 170 0 172 chr15 102102330 102102462 -1392512 - BC1_Mm scRNA scRNA -16 136 30 2 1363 1161 50 124 12 chr15 102102462 102102623 -1392351 + B2_Mm2 SINE B2 2 180 -15 2 1363 204 40 0 0 chr15 102102624 102102649 -1392325 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2 1363 464 170 0 172 chr15 102102649 102102677 -1392297 - BC1_Mm scRNA scRNA -123 29 2 2 1363 260 248 0 74 chr15 102102835 102102866 -1392108 + T-rich Low_complexity Low_complexity 88 116 0 2 1363 590 244 71 13 chr15 102102866 102103020 -1391954 - RSINE1 SINE B4 -1 164 2 2 1363 289 263 0 39 chr15 102103020 102103110 -1391864 + T-rich Low_complexity Low_complexity 1 86 0 2 1363 311 274 87 10 chr15 102103112 102103215 -1391759 - PB1D10 SINE Alu -1 116 6 2 1363 249 332 21 47 chr15 102103231 102103424 -1391550 + L1MC4 LINE L1 7324 7511 -531 2 1363 1185 82 88 0 chr15 102103534 102103704 -1391270 - B2_Mm2 SINE B2 -9 186 2 2 1363 204 40 0 0 chr15 102103716 102103741 -1391233 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 2 1363 375 329 0 21 chr15 102103761 102103904 -1391070 - B4 SINE B4 -152 140 1 2 1363 677 236 27 20 chr15 102104246 102104393 -1390581 - B1_Mur1 SINE Alu -1 148 1 2 1363 380 319 106 6 chr15 102104819 102104999 -1389975 + B3A SINE B2 1 198 0 2 1363 180 0 0 0 chr15 102105032 102105052 -1389922 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 170 706 173 94 0 chr15 102105052 102105179 -1389795 - B1_Mur4 SINE Alu -11 139 1 2 1364 1301 76 37 31 chr15 102105192 102105383 -1389591 - B2_Mm2 SINE B2 -2 193 2 2 1364 1155 81 0 13 chr15 102105943 102106094 -1388880 + B1_Mur4 SINE Alu 1 149 -1 2 1364 192 77 0 0 chr15 102106095 102106121 -1388853 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 2 1364 697 200 87 0 chr15 102106152 102106302 -1388672 + B3 SINE B2 48 210 -6 2 1364 1153 83 0 0 chr15 102106309 102106445 -1388529 + B1_Mus2 SINE Alu 3 138 -9 2 1364 216 0 0 0 chr15 102106445 102106469 -1388505 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 3 1364 1192 48 0 7 chr15 102106545 102106692 -1388282 + B1_Mm SINE Alu 2 147 0 3 1364 355 306 0 58 chr15 102106769 102106873 -1388101 - L1MCa LINE L1 -4521 1987 1890 3 1364 354 45 0 0 chr15 102106888 102106932 -1388042 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 1364 745 254 33 28 chr15 102107002 102107213 -1387761 + B3 SINE B2 2 213 -3 3 1364 273 57 0 0 chr15 102107242 102107277 -1387697 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1364 267 54 0 0 chr15 102107301 102107338 -1387636 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 3 1364 1336 83 0 32 chr15 102107441 102107628 -1387346 + B2_Mm2 SINE B2 4 184 -11 3 1364 188 268 47 35 chr15 102107740 102107825 -1387149 - L2a LINE L2 -143 3283 3198 3 1364 532 263 8 0 chr15 102107846 102107979 -1386995 + ID_B1 SINE B4 90 223 -1 3 1364 492 282 92 20 chr15 102108137 102108289 -1386685 + B3 SINE B2 50 212 -4 3 1364 1488 54 49 0 chr15 102108406 102108590 -1386384 - B2_Mm2 SINE B2 -1 194 2 3 1364 27 0 0 0 chr15 102108593 102108620 -1386354 + AT_rich Low_complexity Low_complexity 1 27 0 3 1364 351 236 17 232 chr15 102108627 102108864 -1386110 - B3A SINE B2 0 198 13 3 1364 468 0 0 0 chr15 102108881 102108933 -1386041 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 3 1364 1067 87 0 21 chr15 102108991 102109132 -1385842 + B1_Mus1 SINE Alu 2 139 -9 3 1364 183 80 0 0 chr15 102109146 102109171 -1385803 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 3 1364 270 349 58 26 chr15 102109250 102109406 -1385568 - L2a LINE L2 -418 3001 2841 3 1364 272 268 60 82 chr15 102112399 102112533 -1382441 - RSINE1 SINE B4 -24 141 11 3 1364 311 312 80 35 chr15 102112428 102112541 -1382433 - B3A SINE B2 -79 119 2 3 1364 1210 22 0 0 chr15 102112790 102112925 -1382049 + B1_Mm SINE Alu 1 135 -12 3 1364 297 0 0 0 chr15 102112926 102112959 -1382015 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 3 1364 976 83 250 0 chr15 102113794 102113950 -1381024 - B2_Mm2 SINE B2 0 195 1 3 1364 497 231 74 0 chr15 102113954 102114075 -1380899 - B1_Mur1 SINE Alu 0 149 20 3 1364 436 288 69 39 chr15 102114666 102114796 -1380178 + B1F SINE Alu 7 140 -9 3 1364 396 0 0 0 chr15 102114796 102114840 -1380134 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 3 1364 451 264 0 0 chr15 102114860 102114947 -1380027 + ID_B1 SINE B4 109 195 -29 3 1364 315 0 0 0 chr15 102114954 102114989 -1379985 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1364 761 154 79 22 chr15 102114992 102115131 -1379843 + B1_Mus1 SINE Alu 1 147 -1 3 1364 386 287 63 49 chr15 102115181 102115324 -1379650 + MIR SINE MIR 108 252 -10 3 1364 325 317 0 0 chr15 102115331 102115413 -1379561 - ID4 SINE ID -1 82 1 3 1364 493 235 0 70 chr15 102115935 102116063 -1378911 - PB1D9 SINE Alu 0 120 2 3 1364 888 121 8 8 chr15 102116063 102116168 -1378806 + B1_Mus1 SINE Alu 38 142 -6 3 1364 569 264 6 74 chr15 102116279 102116455 -1378519 - RSINE1 SINE B4 0 165 2 3 1364 345 258 0 0 chr15 102116456 102116518 -1378456 - PB1D10 SINE Alu -44 73 12 3 1364 734 129 63 24 chr15 102116537 102116664 -1378310 - B1_Mus1 SINE Alu 0 148 17 3 1364 568 201 59 44 chr15 102116668 102116803 -1378171 - B1F SINE Alu -8 141 5 3 1364 556 271 31 83 chr15 102116695 102116888 -1378086 - ID_B1 SINE B4 -26 198 16 3 1364 1414 76 43 0 chr15 102116942 102117127 -1377847 + B2_Mm2 SINE B2 1 193 -2 3 1364 651 225 7 27 chr15 102117206 102117352 -1377622 + B1_Mur4 SINE Alu 2 144 -6 3 1364 1178 129 5 65 chr15 102117354 102117513 -1377461 - B2_Mm2 SINE B2 -7 188 40 3 1364 198 0 0 0 chr15 102117513 102117535 -1377439 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 1364 1192 58 0 0 chr15 102117535 102117674 -1377300 - B1_Mm SINE Alu -8 139 1 3 1364 1178 129 5 65 chr15 102117674 102117712 -1377262 - B2_Mm2 SINE B2 -156 39 3 3 1364 23 25 0 24 chr15 102117714 102117743 -1377231 + AT_rich Low_complexity Low_complexity 1 29 0 3 1364 892 178 200 0 chr15 102117743 102117923 -1377051 + B3 SINE B2 1 216 0 3 1364 23 25 0 24 chr15 102117923 102117934 -1377040 + AT_rich Low_complexity Low_complexity 1 11 0 3 1364 718 174 75 43 chr15 102117937 102118123 -1376851 - B2_Mm2 SINE B2 -2 193 2 3 1364 1083 224 0 14 chr15 102118129 102118346 -1376628 - B3 SINE B2 -2 214 1 3 1364 31 0 0 0 chr15 102118350 102118381 -1376593 + AT_rich Low_complexity Low_complexity 1 31 0 3 1364 731 239 0 0 chr15 102118400 102118542 -1376432 - B1_Mm SINE Alu -2 145 4 3 1364 471 219 93 0 chr15 102118566 102118670 -1376304 - B1_Mur2 SINE Alu -10 139 31 3 1364 382 327 0 34 chr15 102118706 102118823 -1376151 + B3 SINE B2 2 114 -102 3 1364 237 242 136 0 chr15 102118913 102118979 -1375995 - ID4 SINE ID -6 77 3 3 1364 661 197 171 17 chr15 102119006 102119059 -1375915 - B3 SINE B2 -7 209 153 3 1364 1502 234 131 24 chr15 102119059 102119510 -1375464 - RLTR19 LTR ERVK 0 499 1 3 1364 661 197 171 17 chr15 102119510 102119637 -1375337 - B3 SINE B2 -64 152 2 3 1364 838 241 109 15 chr15 102119649 102119851 -1375123 - ID_B1 SINE B4 0 224 4 3 1364 399 263 33 50 chr15 102119963 102120083 -1374891 + PB1D9 SINE Alu 3 120 0 3 1364 1317 76 48 5 chr15 102120142 102120328 -1374646 - B2_Mm2 SINE B2 -1 194 1 3 1364 575 272 18 54 chr15 102120350 102120517 -1374457 + B3 SINE B2 49 209 -7 3 1364 1221 61 0 0 chr15 102120537 102120684 -1374290 + B1_Mus1 SINE Alu 2 148 0 3 1364 1178 85 34 92 chr15 102120714 102120819 -1374155 + B2_Mm2 SINE B2 1 98 -97 3 1364 2391 57 6 73 chr15 102120819 102121159 -1373815 - L1_Mus2 LINE L1 0 6566 6250 3 1364 1178 85 34 92 chr15 102121159 102121260 -1373714 + B2_Mm2 SINE B2 99 195 0 3 1364 1191 68 0 0 chr15 102121261 102121408 -1373566 + B1_Mus1 SINE Alu 2 148 0 3 1364 769 119 143 0 chr15 102121443 102121569 -1373405 + B1_Mur3 SINE Alu 5 148 -1 3 1364 282 302 40 30 chr15 102121581 102121599 -1373375 + B4 SINE B4 70 88 -204 3 1364 518 217 43 9 chr15 102121599 102121702 -1373272 + PB1D9 SINE Alu 1 108 -12 3 1364 1207 61 0 7 chr15 102121702 102121850 -1373124 + B1_Mm SINE Alu 1 147 0 3 1364 518 217 43 9 chr15 102121850 102121862 -1373112 + PB1D9 SINE Alu 109 120 0 3 1364 210 105 0 0 chr15 102121862 102121900 -1373074 + (CAAAAA)n Simple_repeat Simple_repeat 4 41 0 3 1364 602 256 107 122 chr15 102122025 102122230 -1372744 + ID_B1 SINE B4 12 213 -11 3 1364 195 42 0 0 chr15 102122230 102122254 -1372720 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1364 2069 178 48 28 chr15 102122266 102122665 -1372309 - MTB_Mm LTR MaLR 0 407 1 3 1364 508 250 0 11 chr15 102122694 102122872 -1372102 + (TA)n Simple_repeat Simple_repeat 2 177 0 3 1364 903 169 0 0 chr15 102122944 102123086 -1371888 + B1_Mus1 SINE Alu 7 148 0 3 1364 450 277 62 81 chr15 102122947 102123108 -1371866 + B4 SINE B4 94 251 -41 3 1364 320 238 11 91 chr15 102123481 102123569 -1371405 - B3A SINE B2 -117 81 1 3 1364 620 145 31 86 chr15 102123576 102123704 -1371270 - B1_Mur1 SINE Alu 0 149 29 3 1364 185 242 42 70 chr15 102123739 102123810 -1371164 - MIRc SINE MIR -198 70 2 3 1364 665 256 37 43 chr15 102123856 102124019 -1370955 + RSINE1 SINE B4 3 164 -1 3 1364 664 226 7 46 chr15 102124072 102124225 -1370749 - B1_Mur1 SINE Alu -2 147 1 3 1364 332 275 38 0 chr15 102124225 102124305 -1370669 - PB1D10 SINE Alu -5 112 30 3 1364 310 284 0 24 chr15 102124480 102124563 -1370411 - ID4_ SINE ID -1 82 2 3 1364 21 36 0 0 chr15 102124573 102124601 -1370373 + AT_rich Low_complexity Low_complexity 1 28 0 3 1364 939 205 75 0 chr15 102124607 102124807 -1370167 - B3 SINE B2 0 216 2 3 1364 282 306 96 7 chr15 102124813 102124948 -1370026 - B1F1 SINE Alu -2 147 1 3 1364 877 200 79 15 chr15 102124975 102125178 -1369796 - B3 SINE B2 0 216 1 3 1364 1541 62 0 5 chr15 102125180 102125374 -1369600 - B2_Mm2 SINE B2 -2 193 1 3 1364 320 244 0 68 chr15 102125400 102125488 -1369486 - PB1D10 SINE Alu 0 117 36 3 1364 639 201 0 0 chr15 102125780 102125914 -1369060 + CT-rich Low_complexity Low_complexity 1 134 0 3 1364 403 78 12 34 chr15 102125914 102126002 -1368972 - B1_Mus2 SINE Alu 0 147 32 3 1364 714 156 117 0 chr15 102126225 102126353 -1368621 + B1_Mur2 SINE Alu 7 149 0 3 1364 1144 82 0 0 chr15 102127349 102127496 -1367478 - B1_Mm SINE Alu 0 147 1 3 1364 182 37 0 36 chr15 102127505 102127533 -1367441 + (TTTTTA)n Simple_repeat Simple_repeat 4 30 0 3 1364 1159 82 0 7 chr15 102127549 102127696 -1367278 + B1_Mus1 SINE Alu 2 147 -1 3 1364 249 33 0 0 chr15 102127832 102127862 -1367112 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 3 1364 1177 82 6 6 chr15 102127862 102128021 -1366953 - B2_Mm1a SINE B2 -33 160 2 3 1364 22 0 0 0 chr15 102128023 102128045 -1366929 + AT_rich Low_complexity Low_complexity 1 22 0 3 1364 363 273 13 0 chr15 102128045 102128122 -1366852 - ID4_ SINE ID 0 83 6 3 1364 954 107 0 35 chr15 102128249 102128394 -1366580 - B1_Mus1 SINE Alu -7 141 2 3 1364 211 260 155 29 chr15 102128404 102128507 -1366467 - PB1D10 SINE Alu -1 116 1 3 1364 788 91 137 24 chr15 102129999 102130123 -1364851 + B1_Mus1 SINE Alu 1 138 -10 3 1364 207 0 0 0 chr15 102130123 102130146 -1364828 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1364 1100 90 7 0 chr15 102130617 102130761 -1364213 - B1_Mm SINE Alu -1 146 2 4 1364 222 105 0 0 chr15 102130765 102130803 -1364171 + (T)n Simple_repeat Simple_repeat 1 38 0 4 1364 448 264 11 9 chr15 102130803 102130913 -1364061 - PB1D7 SINE Alu 0 120 11 4 1364 287 219 97 0 chr15 102130928 102131009 -1363965 - B1_Mur2 SINE Alu -6 143 54 4 1364 226 143 0 45 chr15 102131051 102131110 -1363864 + ID2 SINE ID 4 60 -23 4 1364 1104 84 139 0 chr15 102131130 102131296 -1363678 - B2_Mm1a SINE B2 -3 190 2 4 1364 1090 154 45 30 chr15 102131485 102131686 -1363288 + B3 SINE B2 2 205 -11 4 1364 305 306 46 0 chr15 102131738 102131846 -1363128 + PB1D7 SINE Alu 1 113 -7 4 1364 566 297 18 46 chr15 102131855 102132014 -1362960 + RSINE1 SINE B4 1 155 -10 4 1364 753 184 34 34 chr15 102132165 102132311 -1362663 + B1_Mus2 SINE Alu 1 146 -1 4 1364 608 162 5 237 chr15 102132312 102132465 -1362509 + B1_Mur3 SINE Alu 1 117 -32 4 1364 1148 62 0 14 chr15 102132465 102132613 -1362361 - B1_Mus2 SINE Alu 0 147 2 4 1364 608 162 5 237 chr15 102132613 102132653 -1362321 + B1_Mur3 SINE Alu 118 149 0 4 1364 22 26 0 25 chr15 102132660 102132680 -1362294 + AT_rich Low_complexity Low_complexity 1 20 0 4 1364 1682 26 0 5 chr15 102132680 102132874 -1362100 - B2_Mm1a SINE B2 0 193 1 4 1364 22 26 0 25 chr15 102132874 102132893 -1362081 + AT_rich Low_complexity Low_complexity 1 19 0 4 1364 261 130 0 0 chr15 102132894 102132940 -1362034 - B3 SINE B2 -6 210 165 4 1364 1324 77 77 0 chr15 102133350 102133531 -1361443 - B2_Mm2 SINE B2 0 195 1 4 1364 255 61 0 0 chr15 102133531 102133564 -1361410 + (TTTCC)n Simple_repeat Simple_repeat 3 35 0 4 1364 215 221 0 81 chr15 102133564 102133638 -1361336 + T-rich Low_complexity Low_complexity 1 68 0 4 1364 250 352 39 15 chr15 102133655 102133785 -1361189 + MER5B DNA MER1_type 6 138 -40 4 1364 514 155 194 0 chr15 102134632 102134735 -1360239 - B1_Mur3 SINE Alu -25 124 2 4 1364 1886 140 48 22 chr15 102135712 102136069 -1358905 + RMER4A LTR ERVK 101 466 0 4 1364 441 283 0 0 chr15 102136919 102137018 -1357956 + PB1D10 SINE Alu 2 100 -17 4 1364 325 256 12 82 chr15 102137029 102137114 -1357860 + ID4_ SINE ID 1 79 -4 4 1364 1235 62 0 0 chr15 102137227 102137373 -1357601 + B1_Mus2 SINE Alu 2 147 0 4 1364 1790 27 20 1 chr15 102137466 102137701 -1357273 - ORR1A0 LTR MaLR 0 367 121 4 1364 414 270 51 28 chr15 102137671 102137831 -1357143 - RSINE1 SINE B4 -141 151 3 4 1364 343 238 12 24 chr15 102138041 102138123 -1356851 + ID4 SINE ID 2 82 -1 4 1364 206 390 114 34 chr15 102138187 102138362 -1356612 + MIRb SINE MIR 50 238 -30 4 1364 304 276 0 50 chr15 102138404 102138484 -1356490 - ID SINE ID -142 82 7 4 1364 557 207 74 8 chr15 102138486 102138608 -1356366 - B1_Mur1 SINE Alu -9 140 11 4 1364 512 214 12 0 chr15 102138638 102138746 -1356228 - PB1D7 SINE Alu -2 118 4 4 1364 257 0 0 29 chr15 102138825 102138859 -1356115 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 4 1364 31 58 0 0 chr15 102138871 102138923 -1356051 + AT_rich Low_complexity Low_complexity 1 52 0 4 1364 729 221 7 0 chr15 102139247 102139392 -1355582 - B1_Mur4 SINE Alu 0 150 5 4 1364 291 286 0 54 chr15 102139393 102139467 -1355507 + ID_B1 SINE B4 146 215 -9 4 1364 21 57 0 0 chr15 102140196 102140231 -1354743 + AT_rich Low_complexity Low_complexity 1 35 0 4 1364 505 284 211 12 chr15 102140267 102140438 -1354536 - B3 SINE B2 -11 205 1 4 1364 891 96 80 22 chr15 102140599 102140737 -1354237 - B1_Mus1 SINE Alu 0 148 3 4 1364 1026 154 85 25 chr15 102141192 102141392 -1353582 + URR1B DNA MER1_type 4 215 -10 4 1364 1501 53 5 5 chr15 102141468 102141658 -1353316 - B2_Mm1t SINE B2 -2 191 2 4 1364 279 0 0 0 chr15 102141717 102141748 -1353226 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 4 1364 219 265 73 0 chr15 102141748 102141816 -1353158 - ID4_ SINE ID -9 74 2 4 1364 230 242 229 10 chr15 102142047 102142143 -1352831 + PB1D10 SINE Alu 1 117 0 4 1364 1377 74 40 0 chr15 102142363 102142539 -1352435 - B2_Mm2 SINE B2 -12 183 1 4 1364 180 0 0 0 chr15 102142605 102142625 -1352349 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 1364 1009 83 30 0 chr15 102142625 102142758 -1352216 - B1_Mm SINE Alu -10 137 1 4 1364 1511 137 0 9 chr15 102144046 102144274 -1350700 + URR1A DNA MER1_type 1 226 0 4 1364 347 250 12 36 chr15 102144836 102144919 -1350055 - B1_Mur1 SINE Alu 0 149 69 4 1364 232 242 16 233 chr15 102144842 102144971 -1350003 - B4 SINE B4 -72 220 120 4 1364 446 245 98 0 chr15 102145010 102145112 -1349862 + PB1D9 SINE Alu 3 114 -6 4 1364 275 256 256 31 chr15 102145136 102145265 -1349709 + RSINE1 SINE B4 3 160 -5 4 1364 217 143 0 28 chr15 102145294 102145330 -1349644 - PB1D9 SINE Alu -85 35 1 4 1364 228 182 0 0 chr15 102147744 102147788 -1347186 - ID_B1 SINE B4 0 224 181 4 1364 263 288 0 0 chr15 102147885 102147944 -1347030 - B4A SINE B4 -4 288 230 4 1364 257 333 95 29 chr15 102147966 102148071 -1346903 - B4A SINE B4 -137 155 44 4 1364 518 216 29 10 chr15 102148217 102148320 -1346654 - PB1D10 SINE Alu -8 109 5 4 1364 351 0 0 0 chr15 102148362 102148401 -1346573 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 1364 1201 69 0 0 chr15 102148401 102148545 -1346429 - B1_Mus2 SINE Alu -3 144 1 4 1364 1382 94 16 0 chr15 102148549 102148741 -1346233 - B2_Mm2 SINE B2 0 195 1 4 1364 301 268 0 0 chr15 102148762 102148833 -1346141 - ID_B1 SINE B4 -2 222 152 4 1364 255 355 37 18 chr15 102148766 102148875 -1346099 - PB1D10 SINE Alu -6 111 1 4 1364 1271 129 5 15 chr15 102148874 102149071 -1345903 - B2_Mm2 SINE B2 0 195 1 4 1364 248 281 70 12 chr15 102149081 102149181 -1345793 - PB1D9 SINE Alu -5 115 11 4 1364 1500 72 5 0 chr15 102149425 102149618 -1345356 + B2_Mm2 SINE B2 2 195 0 4 1364 1132 90 7 0 chr15 102149633 102149778 -1345196 + B1_Mus2 SINE Alu 2 147 0 4 1364 622 216 90 0 chr15 102151332 102151466 -1343508 + B1F SINE Alu 3 148 -1 4 1364 438 267 29 0 chr15 102151564 102151669 -1343305 + ID_B1 SINE B4 88 195 -29 4 1364 314 117 33 0 chr15 102151676 102151736 -1343238 + (TCCC)n Simple_repeat Simple_repeat 3 64 0 4 1364 700 307 0 126 chr15 102151757 102151921 -1343053 + ID_B1 SINE B4 8 156 -68 4 1364 884 124 43 7 chr15 102151921 102152059 -1342915 - B1_Mus2 SINE Alu 0 147 5 4 1364 700 307 0 126 chr15 102152059 102152140 -1342834 + ID_B1 SINE B4 157 222 -2 4 1364 1093 71 0 21 chr15 102152148 102152291 -1342683 + B1_Mm SINE Alu 1 140 -7 4 1364 22 0 0 0 chr15 102152298 102152320 -1342654 + AT_rich Low_complexity Low_complexity 1 22 0 4 1364 303 212 222 0 chr15 102152330 102152429 -1342545 + PB1 SINE Alu 5 125 -2 4 1364 455 175 6 36 chr15 102152437 102152540 -1342434 + B1_Mur2 SINE Alu 12 139 -10 4 1364 207 0 0 0 chr15 102152540 102152563 -1342411 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1364 455 132 13 13 chr15 102154948 102155025 -1339949 + B1_Mur3 SINE Alu 73 149 0 4 1364 307 281 33 11 chr15 102155031 102155121 -1339853 + B1_Mur1 SINE Alu 42 133 -16 4 1364 1002 103 98 98 chr15 102155344 102155485 -1339489 + B2_Mm1t SINE B2 1 160 -33 4 1364 270 0 0 0 chr15 102155485 102155515 -1339459 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 4 1364 1002 103 98 98 chr15 102155515 102155566 -1339408 + B2_Mm1t SINE B2 161 193 0 4 1364 355 255 18 35 chr15 102155613 102155741 -1339233 + B3 SINE B2 1 125 -70 4 1364 4140 25 0 0 chr15 102155924 102156412 -1338562 - MERVL-int LTR ERVL -191 5294 4807 4 1364 376 299 90 58 chr15 102157710 102157866 -1337108 + RSINE1 SINE B4 3 163 -2 4 1364 697 256 92 0 chr15 102157907 102158071 -1336903 + B3 SINE B2 5 183 -33 4 1364 1811 115 8 120 chr15 102158078 102158148 -1336826 - ORR1A4 LTR MaLR -8 321 283 4 1364 1239 34 7 0 chr15 102158148 102158294 -1336680 - B1_Mus2 SINE Alu 0 147 1 4 1364 1811 115 8 120 chr15 102158294 102158580 -1336394 - ORR1A4 LTR MaLR -47 282 5 4 1364 21 57 0 0 chr15 102158585 102158620 -1336354 + AT_rich Low_complexity Low_complexity 1 35 0 4 1364 219 36 0 0 chr15 102159325 102159353 -1335621 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1364 354 163 0 0 chr15 102159348 102159446 -1335528 + GA-rich Low_complexity Low_complexity 1 98 0 4 1364 324 244 160 43 chr15 102159646 102159740 -1335234 + ID_B1 SINE B4 72 176 -48 4 1364 524 194 86 19 chr15 102159656 102159761 -1335213 + PB1D7 SINE Alu 6 117 -3 4 1364 1051 103 0 33 chr15 102159819 102159969 -1335005 - B1_Mus2 SINE Alu 0 147 3 4 1364 296 270 104 112 chr15 102159972 102160041 -1334933 + ID_B1 SINE B4 93 150 -74 4 1364 1105 52 44 0 chr15 102160041 102160176 -1334798 - B1_Mus2 SINE Alu -5 142 2 4 1364 296 270 104 112 chr15 102160176 102160231 -1334743 + ID_B1 SINE B4 151 216 -8 4 1364 411 206 118 0 chr15 102160377 102160479 -1334495 + PB1D10 SINE Alu 4 117 0 4 1364 354 296 163 17 chr15 102160493 102160665 -1334309 + B3A SINE B2 2 198 0 4 1364 882 252 81 40 chr15 102160686 102160959 -1334015 + B4A SINE B4 3 286 -6 4 1364 347 164 29 15 chr15 102161067 102161135 -1333839 + PB1D9 SINE Alu 50 118 -2 4 1364 988 67 44 15 chr15 102161277 102161414 -1333560 + B1_Mus2 SINE Alu 1 141 -6 4 1364 867 198 67 34 chr15 102162934 102163143 -1331831 - B3 SINE B2 0 216 1 4 1364 812 273 77 68 chr15 102163144 102163510 -1331464 + MTE2a LTR MaLR 3 371 -8 4 1364 858 150 7 13 chr15 102163709 102163858 -1331116 - B1_Mur3 SINE Alu 0 149 2 5 1364 425 241 102 0 chr15 102163920 102164028 -1330946 + MER2 DNA MER2_type 119 237 -108 5 1364 553 282 0 22 chr15 102164031 102164165 -1330809 + ID_B1 SINE B4 94 224 0 5 1364 233 93 209 0 chr15 102164222 102164265 -1330709 + B1_Mur4 SINE Alu 93 144 -6 5 1364 311 246 15 0 chr15 102164264 102164329 -1330645 + MER2 DNA MER2_type 218 283 -62 5 1364 1685 160 31 31 chr15 102164900 102165217 -1329757 - ORR1C1 LTR MaLR -1 377 61 5 1364 347 220 176 0 chr15 102165397 102165488 -1329486 + PB1D10 SINE Alu 4 110 -7 5 1364 1507 73 5 0 chr15 102165513 102165705 -1329269 - B2_Mm1a SINE B2 0 193 1 5 1364 827 229 73 11 chr15 102166435 102166612 -1328362 + B3 SINE B2 23 210 -6 5 1364 1260 48 0 0 chr15 102166614 102166761 -1328213 - B1_Mm SINE Alu 0 147 1 5 1364 669 173 123 23 chr15 102166764 102166894 -1328080 - B1_Mur2 SINE Alu 0 149 7 5 1364 637 114 289 0 chr15 102166915 102167029 -1327945 + B1_Mm SINE Alu 1 147 0 5 1364 837 191 121 11 chr15 102168364 102168554 -1326420 + B3 SINE B2 3 213 -3 5 1364 300 154 0 0 chr15 102169004 102169056 -1325918 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 1364 713 182 51 7 chr15 102169448 102169586 -1325388 + B1_Mur2 SINE Alu 1 144 -5 5 1364 241 165 371 0 chr15 102170947 102171044 -1323930 + B3A SINE B2 1 133 -65 5 1364 53 57 0 9 chr15 102171348 102171420 -1323554 + AT_rich Low_complexity Low_complexity 1 72 0 5 1364 1232 48 7 0 chr15 102171420 102171566 -1323408 + B1_Mm SINE Alu 1 147 0 5 1364 53 57 0 9 chr15 102171566 102171599 -1323375 + AT_rich Low_complexity Low_complexity 1 33 0 5 1364 234 91 0 0 chr15 102171604 102171637 -1323337 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 5 1364 572 58 46 0 chr15 102171723 102171810 -1323164 + B1_Mur3 SINE Alu 59 149 0 5 1364 23 0 0 53 chr15 102171853 102171871 -1323103 + AT_rich Low_complexity Low_complexity 1 17 0 5 1364 330 121 615 0 chr15 102171871 102171962 -1323012 + B1_Mus1 SINE Alu 2 148 0 5 1364 23 0 0 53 chr15 102171962 102171981 -1322993 + AT_rich Low_complexity Low_complexity 1 19 0 5 1364 415 295 174 31 chr15 102171981 102172142 -1322832 + B3 SINE B2 6 189 -27 5 1364 1034 204 19 28 chr15 102172402 102172614 -1322360 + B3 SINE B2 1 210 -6 5 1364 395 250 128 8 chr15 102172641 102172774 -1322200 + B1F2 SINE Alu 1 149 0 5 1364 1247 49 0 0 chr15 102172876 102173019 -1321955 + B1_Mus2 SINE Alu 5 147 0 5 1364 231 109 15 59 chr15 102173019 102173087 -1321887 + A-rich Low_complexity Low_complexity 1 65 0 5 1364 647 152 102 23 chr15 102173164 102173292 -1321682 + B1_Mur4 SINE Alu 1 138 -12 5 1364 208 143 0 0 chr15 102173306 102173341 -1321633 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1364 635 199 99 0 chr15 102173432 102173563 -1321411 + B1_Mur1 SINE Alu 4 147 -2 5 1364 301 298 68 34 chr15 102173705 102173823 -1321151 + RSINE1 SINE B4 38 159 -6 5 1364 803 174 7 22 chr15 102173853 102173988 -1320986 - B1_Mur4 SINE Alu -17 133 1 5 1364 689 153 89 30 chr15 102174102 102174237 -1320737 - B1_Mus1 SINE Alu 0 148 6 5 1364 846 183 200 0 chr15 102174741 102174921 -1320053 + B3 SINE B2 1 216 0 5 1364 793 127 104 0 chr15 102174952 102175086 -1319888 + B1_Mur3 SINE Alu 2 149 0 5 1364 676 193 227 28 chr15 102175102 102175278 -1319696 + B3 SINE B2 1 211 -5 5 1364 1354 73 11 6 chr15 102175330 102175509 -1319465 + B2_Mm2 SINE B2 2 181 -14 5 1364 293 293 36 24 chr15 102175552 102175636 -1319338 + ID SINE ID 1 85 -139 5 1364 326 174 64 156 chr15 102175694 102175726 -1319248 + MT2B LTR ERVL 138 159 -442 5 1364 478 153 41 0 chr15 102175726 102175824 -1319150 + B1_Mus1 SINE Alu 3 115 -5 5 1364 228 135 0 0 chr15 102175970 102176007 -1318967 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1364 521 187 310 0 chr15 102176219 102176390 -1318584 - MTD LTR MaLR 0 419 196 5 1364 264 281 11 104 chr15 102176411 102176428 -1318546 - RLTR25B LTR ERVK -531 572 522 5 1364 657 133 80 13 chr15 102176428 102176561 -1318413 - B1_Mur2 SINE Alu 0 149 12 5 1364 264 281 11 104 chr15 102176561 102176584 -1318390 - RLTR25B LTR ERVK -531 521 444 5 1364 265 289 39 178 chr15 102176575 102176806 -1318168 - MTD LTR MaLR -211 210 12 5 1364 598 271 94 50 chr15 102177621 102177823 -1317151 + ID_B1 SINE B4 2 212 -12 5 1364 27 0 0 0 chr15 102177825 102177852 -1317122 + AT_rich Low_complexity Low_complexity 1 27 0 5 1364 658 173 80 29 chr15 102177859 102177996 -1316978 + B1_Mus1 SINE Alu 5 148 0 5 1364 1365 78 15 30 chr15 102177999 102178197 -1316777 + B2_Mm2 SINE B2 1 195 0 5 1364 491 243 20 68 chr15 102178387 102178533 -1316441 + B1_Mur1 SINE Alu 2 140 -9 5 1364 194 159 0 43 chr15 102178551 102178597 -1316377 + GA-rich Low_complexity Low_complexity 4 47 0 5 1364 382 283 66 92 chr15 102178728 102178880 -1316094 + B4A SINE B4 77 224 -68 5 1364 836 113 29 22 chr15 102178747 102178883 -1316091 + B1_Mus2 SINE Alu 11 147 0 5 1364 450 36 0 0 chr15 102178899 102178955 -1316019 + (GAAA)n Simple_repeat Simple_repeat 2 57 0 5 1364 1268 77 32 21 chr15 102179077 102179263 -1315711 + B2_Mm2 SINE B2 2 189 -6 5 1364 197 204 204 0 chr15 102179312 102179356 -1315618 - MIRm SINE MIR -8 268 216 5 1364 198 200 137 20 chr15 102179333 102179384 -1315590 - MIRb SINE MIR -36 232 176 5 1364 916 243 64 5 chr15 102179432 102179635 -1315339 - ID_B1 SINE B4 -8 216 2 5 1364 1270 28 0 0 chr15 102179743 102179888 -1315086 - B1_Mus2 SINE Alu -1 146 2 5 1364 219 289 167 0 chr15 102181759 102181849 -1313125 + PB1D10 SINE Alu 5 109 -8 5 1364 294 226 161 0 chr15 102181865 102181958 -1313016 + ID_B1 SINE B4 104 211 -13 5 1364 198 0 0 0 chr15 102181977 102181999 -1312975 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 1364 1297 87 41 0 chr15 102182000 102182172 -1312802 - B2_Mm2 SINE B2 -15 180 2 5 1364 667 221 29 14 chr15 102182178 102182316 -1312658 - B1_Mur1 SINE Alu -5 144 5 5 1364 23 0 0 0 chr15 102182711 102182734 -1312240 + AT_rich Low_complexity Low_complexity 1 23 0 5 1364 1026 216 11 5 chr15 102182734 102182925 -1312049 - B3 SINE B2 -24 192 1 5 1364 749 154 35 40 chr15 102182944 102183101 -1311873 - B1_Mus1 SINE Alu 0 148 1 5 1364 227 282 20 162 chr15 102182970 102183118 -1311856 - MT2B LTR ERVL -323 278 152 5 1364 736 230 0 20 chr15 102183161 102183312 -1311662 + B1_Mur1 SINE Alu 1 148 -1 5 1364 241 263 65 13 chr15 102183340 102183417 -1311557 + ID_B1 SINE B4 142 222 -2 5 1364 340 171 181 12 chr15 102183489 102183572 -1311402 - PB1D7 SINE Alu 0 120 24 5 1364 183 156 0 0 chr15 102183644 102183676 -1311298 + A-rich Low_complexity Low_complexity 1 32 0 5 1364 333 0 0 0 chr15 102183676 102183713 -1311261 + (GA)n Simple_repeat Simple_repeat 1 37 0 5 1364 558 98 0 0 chr15 102183713 102183795 -1311179 + (GGAA)n Simple_repeat Simple_repeat 4 85 0 5 1364 1244 48 0 0 chr15 102183885 102184031 -1310943 - B1_Mus2 SINE Alu 0 147 2 5 1364 451 281 1 3 chr15 102184409 102184515 -1310459 + B3A SINE B2 1 104 -89 5 1364 570 269 0 15 chr15 102184552 102184688 -1310286 + B1_Mur2 SINE Alu 4 137 -12 5 1364 1519 42 15 40 chr15 102184713 102184913 -1310061 - B2_Mm2 SINE B2 0 195 1 5 1364 447 271 90 10 chr15 102184916 102185074 -1309900 - B3A SINE B2 -20 175 7 5 1364 28 0 0 0 chr15 102185082 102185110 -1309864 + AT_rich Low_complexity Low_complexity 1 28 0 5 1364 546 16 0 0 chr15 102185862 102185925 -1309049 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 1364 26 0 0 0 chr15 102187049 102187075 -1307899 + AT_rich Low_complexity Low_complexity 1 26 0 5 1364 231 235 60 36 chr15 102187289 102187373 -1307601 + L2a LINE L2 3327 3412 -14 5 1364 201 74 0 0 chr15 102187911 102187938 -1307036 + (TTA)n Simple_repeat Simple_repeat 2 28 0 5 1364 222 37 0 0 chr15 102188126 102188153 -1306821 + (CAT)n Simple_repeat Simple_repeat 2 28 0 5 1364 436 270 10 29 chr15 102190184 102190287 -1304687 + ID_B1 SINE B4 84 184 -40 5 1364 477 162 0 0 chr15 102190313 102190387 -1304587 + B1_Mur2 SINE Alu 67 140 -9 5 1364 342 0 0 0 chr15 102190387 102190425 -1304549 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 5 1364 213 220 0 57 chr15 102190444 102190497 -1304477 + PB1 SINE Alu 66 115 -12 5 1364 479 221 6 125 chr15 102190990 102191034 -1303940 + MT2B LTR ERVL 125 149 -452 5 1364 850 195 0 0 chr15 102191034 102191172 -1303802 + B1_Mur4 SINE Alu 1 138 -12 5 1364 441 0 0 0 chr15 102191172 102191221 -1303753 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 5 1364 604 254 53 27 chr15 102191439 102191589 -1303385 + RSINE1 SINE B4 2 155 -10 5 1364 255 121 52 0 chr15 102191617 102191675 -1303299 + CT-rich Low_complexity Low_complexity 2 62 0 5 1364 1518 53 21 10 chr15 102191701 102191893 -1303081 - B2_Mm2 SINE B2 -1 194 1 5 1364 1123 209 5 14 chr15 102191921 102192139 -1302835 + B3 SINE B2 1 216 0 5 1364 757 143 17 0 chr15 102192145 102192264 -1302710 + B1_Mus1 SINE Alu 16 136 -12 5 1364 962 139 6 0 chr15 102192264 102192429 -1302545 + (GAAA)n Simple_repeat Simple_repeat 4 169 0 5 1364 722 22 0 11 chr15 102192577 102192670 -1302304 + (TC)n Simple_repeat Simple_repeat 1 92 0 5 1364 204 118 0 29 chr15 102193082 102193117 -1301857 + (GGA)n Simple_repeat Simple_repeat 3 36 0 5 1364 521 204 72 132 chr15 102193731 102193883 -1301091 + B1_Mur2 SINE Alu 7 149 0 6 1364 955 132 0 0 chr15 102193889 102194025 -1300949 + B1_Mus1 SINE Alu 1 136 -12 6 1364 213 121 0 0 chr15 102194036 102194069 -1300905 + (GGGA)n Simple_repeat Simple_repeat 1 33 0 6 1364 254 258 30 0 chr15 102194199 102194265 -1300709 - ID4_ SINE ID 0 83 16 6 1364 452 244 95 97 chr15 102194378 102194604 -1300370 + B4 SINE B4 4 224 -68 6 1364 740 145 0 8 chr15 102194487 102194605 -1300369 + B1_Mm SINE Alu 30 146 -1 6 1364 209 128 26 0 chr15 102194605 102194644 -1300330 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 6 1364 194 174 0 21 chr15 102194955 102195002 -1299972 + (TAA)n Simple_repeat Simple_repeat 1 46 0 6 1364 447 309 14 48 chr15 102195002 102195148 -1299826 + RSINE1 SINE B4 25 165 0 6 1364 737 169 47 53 chr15 102195526 102195676 -1299298 - B1_Mur3 SINE Alu 0 149 1 6 1364 196 93 0 65 chr15 102196725 102196771 -1298203 + GA-rich Low_complexity Low_complexity 1 43 0 6 1364 530 118 11 0 chr15 102197342 102197435 -1297539 + (CTG)n Simple_repeat Simple_repeat 1 94 0 6 1364 707 218 0 13 chr15 102197758 102198454 -1296520 + (TG)n Simple_repeat Simple_repeat 1 687 0 6 1364 216 182 0 0 chr15 102199378 102199411 -1295563 + ID4_ SINE ID 3 35 -48 6 1364 333 0 0 0 chr15 102199425 102199462 -1295512 + (TC)n Simple_repeat Simple_repeat 1 37 0 6 1364 297 0 0 0 chr15 102199462 102199494 -1295480 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1364 975 158 0 0 chr15 102199665 102199804 -1295170 + B1_Mur2 SINE Alu 5 143 -6 6 1364 234 62 0 0 chr15 102199825 102199857 -1295117 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 6 1364 761 133 0 92 chr15 102199907 102200048 -1294926 + B1_Mur4 SINE Alu 23 150 0 6 1364 1203 43 0 0 chr15 102200079 102200218 -1294756 + B1_Mm SINE Alu 1 139 -8 6 1364 337 268 164 44 chr15 102200229 102200451 -1294523 + L1M4c LINE L1 3339 3542 -2840 6 1364 509 237 10 10 chr15 102202199 102202297 -1292677 + ID_B1 SINE B4 106 203 -21 6 1364 280 272 86 19 chr15 102202714 102202819 -1292155 + PB1D10 SINE Alu 1 112 -5 6 1364 615 241 49 21 chr15 102202825 102202969 -1292005 + B1F SINE Alu 2 149 0 6 1364 326 241 98 54 chr15 102202978 102203070 -1291904 + RSINE1 SINE B4 9 104 -61 6 1364 351 0 0 0 chr15 102203084 102203123 -1291851 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1364 1559 52 0 10 chr15 102203181 102203375 -1291599 + B2_Mm2 SINE B2 1 192 -3 6 1364 503 219 31 10 chr15 102204316 102204413 -1290561 + U6 snRNA snRNA 8 106 -1 6 1364 240 195 0 0 chr15 102204474 102204515 -1290459 + B3A SINE B2 5 45 -153 6 1364 1108 86 0 0 chr15 102204538 102204677 -1290297 - B1_Mm SINE Alu -8 139 1 6 1364 513 0 0 0 chr15 102204704 102204761 -1290213 + (TC)n Simple_repeat Simple_repeat 1 57 0 6 1364 385 229 22 67 chr15 102205112 102205201 -1289773 + B1F SINE Alu 25 109 -40 6 1364 677 99 0 18 chr15 102205201 102205314 -1289660 + (GGAA)n Simple_repeat Simple_repeat 4 114 0 6 1364 244 306 116 9 chr15 102205559 102205671 -1289303 + PB1 SINE Alu 1 124 -3 6 1364 359 279 161 13 chr15 102205881 102206030 -1288944 + MIRb SINE MIR 34 204 -64 6 1364 468 257 97 0 chr15 102206034 102206147 -1288827 + RSINE1 SINE B4 17 140 -25 6 1364 357 24 0 0 chr15 102206147 102206189 -1288785 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1364 952 136 14 0 chr15 102206208 102206355 -1288619 - B1_Mur4 SINE Alu -1 149 1 6 1364 290 273 0 0 chr15 102206404 102206470 -1288504 - ID4 SINE ID -8 75 10 6 1364 239 170 0 19 chr15 102207297 102207351 -1287623 + (CGGGG)n Simple_repeat Simple_repeat 2 54 0 6 1364 503 154 99 0 chr15 102208979 102209070 -1285904 - PB1D9 SINE Alu -3 117 18 6 1364 235 174 141 115 chr15 102209010 102209088 -1285886 - MT2B LTR ERVL -366 235 156 6 1364 590 192 83 16 chr15 102209086 102209250 -1285724 + B3 SINE B2 25 193 -2 6 1364 640 172 115 15 chr15 102209288 102209418 -1285556 - B1_Mur1 SINE Alu 0 149 7 6 1364 454 273 47 99 chr15 102209290 102209461 -1285513 - B4 SINE B4 -69 223 62 6 1364 448 238 47 19 chr15 102209458 102209494 -1285480 - PB1D10 SINE Alu -2 115 6 6 1364 462 183 0 0 chr15 102209494 102209565 -1285409 - ID_B1 SINE B4 -67 157 87 6 1364 1084 103 7 0 chr15 102209885 102210031 -1284943 - B1_Mus1 SINE Alu 0 148 2 6 1364 1507 22 56 0 chr15 102210149 102210328 -1284646 - B2_Mm1a SINE B2 -4 189 1 6 1364 544 198 81 0 chr15 102210701 102210812 -1284162 + PB1D9 SINE Alu 1 120 0 6 1364 1217 75 0 0 chr15 102210830 102210977 -1283997 + B1_Mus1 SINE Alu 1 147 -1 6 1364 264 59 0 0 chr15 102210977 102211011 -1283963 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 6 1364 255 223 140 0 chr15 102211159 102211233 -1283741 + PB1D10 SINE Alu 15 110 -7 6 1364 421 217 139 0 chr15 102211239 102211368 -1283606 + B1F2 SINE Alu 3 149 0 6 1364 1226 61 0 0 chr15 102211381 102211528 -1283446 + B1_Mus2 SINE Alu 1 147 0 6 1364 209 33 33 0 chr15 102211765 102211795 -1283179 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1364 380 191 12 0 chr15 102211796 102211880 -1283094 + GA-rich Low_complexity Low_complexity 2 86 0 6 1364 246 81 0 0 chr15 102212023 102212060 -1282914 + (A)n Simple_repeat Simple_repeat 1 37 0 6 1364 261 254 29 43 chr15 102212694 102212764 -1282210 + ID4 SINE ID 8 76 -7 6 1364 202 140 0 23 chr15 102212829 102212873 -1282101 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 1364 679 72 0 6 chr15 102212873 102212972 -1282002 - B1_Mus2 SINE Alu 0 150 57 6 1364 504 200 11 0 chr15 102213009 102213099 -1281875 + B1_Mur2 SINE Alu 43 133 -16 6 1364 685 276 35 25 chr15 102213319 102213516 -1281458 + ID_B1 SINE B4 11 209 -15 6 1364 379 230 53 112 chr15 102213398 102213520 -1281454 + B1F SINE Alu 7 124 -25 6 1364 212 0 36 0 chr15 102213520 102213548 -1281426 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 1364 1240 29 0 0 chr15 102213548 102213686 -1281288 - B1_Mm SINE Alu -9 138 1 6 1364 379 230 53 112 chr15 102213686 102213714 -1281260 + B1F SINE Alu 125 148 -1 6 1364 871 207 0 0 chr15 102213727 102213872 -1281102 + B1_Mur1 SINE Alu 5 149 0 6 1364 1166 55 14 0 chr15 102214032 102214177 -1280797 - B1_Mm SINE Alu 0 147 1 6 1364 462 141 83 42 chr15 102214670 102214766 -1280208 - L1_Mus4 LINE L1 -194 6442 6343 6 1364 879 168 7 14 chr15 102214779 102214924 -1280050 + B1_Mur2 SINE Alu 5 148 -1 6 1364 517 207 171 0 chr15 102215204 102215315 -1279659 - B3 SINE B2 -1 215 86 6 1364 892 158 0 0 chr15 102215341 102215480 -1279494 + B2_Mm2 SINE B2 1 139 -56 6 1364 374 57 0 19 chr15 102215494 102215548 -1279426 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 6 1364 1156 75 0 7 chr15 102215548 102215695 -1279279 + B1_Mus2 SINE Alu 2 147 0 6 1364 1194 62 84 0 chr15 102215724 102215903 -1279071 - B2_Mm2 SINE B2 0 195 2 6 1364 420 180 144 11 chr15 102215903 102215993 -1278981 - B1_Mus1 SINE Alu -46 102 1 6 1364 180 0 0 0 chr15 102216021 102216041 -1278933 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 1364 720 309 68 27 chr15 102216083 102216346 -1278628 - B4A SINE B4 -18 274 1 6 1364 242 357 0 20 chr15 102216346 102216446 -1278528 + RMER30 DNA MER1_type 104 201 -1 6 1364 364 299 46 18 chr15 102216446 102216555 -1278419 - B1F SINE Alu -35 114 3 6 1364 189 0 0 0 chr15 102216671 102216692 -1278282 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1364 877 102 0 0 chr15 102216692 102216810 -1278164 + B2_Mm2 SINE B2 3 120 -75 6 1364 629 87 65 0 chr15 102216819 102216911 -1278063 - B1_Mur4 SINE Alu -52 98 1 6 1364 917 92 8 0 chr15 102216911 102217033 -1277941 + B1_Mus1 SINE Alu 26 148 0 6 1364 336 262 66 80 chr15 102216914 102217051 -1277923 + B4A SINE B4 114 248 -44 6 1364 266 261 142 71 chr15 102217068 102217336 -1277638 - RMER10A LTR ERVL -72 370 84 6 1364 245 311 39 70 chr15 102217441 102217569 -1277405 - ID_B1 SINE B4 -2 222 99 6 1364 352 190 0 0 chr15 102217644 102217702 -1277272 - PB1D10 SINE Alu -35 82 25 6 1364 205 194 0 0 chr15 102217761 102217797 -1277177 + CT-rich Low_complexity Low_complexity 3 38 0 6 1364 279 0 0 0 chr15 102217803 102217834 -1277140 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 1364 929 96 81 0 chr15 102217867 102218003 -1276971 - B1_Mus2 SINE Alu 0 147 1 6 1364 1542 53 16 5 chr15 102218021 102218211 -1276763 - B2_Mm1t SINE B2 -1 192 1 6 1364 1361 84 21 21 chr15 102218213 102218407 -1276567 - B2_Mm2 SINE B2 0 195 2 6 1364 1246 28 14 0 chr15 102218470 102218615 -1276359 + B1_Mm SINE Alu 1 147 0 6 1364 576 167 0 0 chr15 102218617 102218710 -1276264 + A-rich Low_complexity Low_complexity 1 93 0 6 1364 1118 141 49 0 chr15 102218710 102218894 -1276080 + B2_Mm1t SINE B2 1 193 0 6 1364 576 167 0 0 chr15 102218894 102218908 -1276066 + A-rich Low_complexity Low_complexity 94 107 0 6 1364 530 238 41 20 chr15 102219089 102219235 -1275739 - ORR1D2 LTR MaLR -3 367 219 6 1364 388 238 105 0 chr15 102219261 102219366 -1275608 - ORR1D2 LTR MaLR -111 259 144 6 1364 911 259 48 19 chr15 102219401 102219610 -1275364 - B3 SINE B2 0 216 2 6 1364 1235 220 75 58 chr15 102219615 102219977 -1274997 + ORR1D2 LTR MaLR 3 370 0 6 1364 180 152 0 0 chr15 102220004 102220037 -1274937 + A-rich Low_complexity Low_complexity 1 33 0 7 1364 1049 77 15 0 chr15 102220097 102220227 -1274747 + B1_Mm SINE Alu 1 132 -15 7 1364 546 16 0 0 chr15 102220266 102220329 -1274645 + (TTTC)n Simple_repeat Simple_repeat 3 65 0 7 1364 1443 73 0 0 chr15 102220329 102220508 -1274466 - B2_Mm1a SINE B2 -14 179 1 7 1364 861 236 10 19 chr15 102220588 102220795 -1274179 - RMER10B LTR ERVL 0 398 194 7 1364 201 121 0 0 chr15 102220855 102220888 -1274086 + (AGGGGG)n Simple_repeat Simple_repeat 6 38 0 7 1364 860 52 0 57 chr15 102220908 102221031 -1273943 - B1_Mm SINE Alu -31 116 1 7 1364 452 279 17 130 chr15 102221031 102221143 -1273831 - MT2B LTR ERVL -456 145 60 7 1364 590 243 13 65 chr15 102221031 102221056 -1273918 - B4 SINE B4 -79 190 68 7 1364 210 37 0 0 chr15 102221168 102221195 -1273779 + (TTGG)n Simple_repeat Simple_repeat 2 28 0 7 1364 1173 81 0 0 chr15 102221198 102221346 -1273628 - B1_Mus1 SINE Alu 0 148 1 7 1364 755 43 0 0 chr15 102221730 102221822 -1273152 + 4.5SRNA scRNA scRNA 1 92 -2 7 1364 1591 41 0 10 chr15 102221822 102222017 -1272957 + B2_Mm1a SINE B2 1 193 0 7 1364 1445 51 0 6 chr15 102222071 102222248 -1272726 - B2_Mm2 SINE B2 -18 177 2 7 1364 717 192 0 0 chr15 102222465 102222595 -1272379 - B3 SINE B2 -86 130 1 7 1364 231 119 0 87 chr15 102222597 102222643 -1272331 - B3A SINE B2 -156 42 1 7 1364 785 172 14 20 chr15 102222652 102222800 -1272174 - B1_Mur3 SINE Alu -1 148 2 7 1364 549 222 140 45 chr15 102222809 102222988 -1271986 - B3A SINE B2 0 198 3 7 1364 515 197 158 0 chr15 102223024 102223151 -1271823 - B1_Mus1 SINE Alu 0 148 2 7 1364 300 321 43 7 chr15 102223153 102223294 -1271680 - ID_B1 SINE B4 -1 223 78 7 1364 1131 68 0 20 chr15 102223495 102223645 -1271329 - B1_Mm SINE Alu 0 147 1 7 1364 1354 62 34 0 chr15 102223723 102223902 -1271072 + B2_Mm1t SINE B2 2 186 -7 7 1364 377 85 0 48 chr15 102224682 102224744 -1270230 - LTRIS2 LTR ERV1 -505 59 1 7 1364 427 246 254 12 chr15 102224777 102224946 -1270028 + B3 SINE B2 3 212 -4 7 1364 1161 58 0 0 chr15 102224956 102225095 -1269879 + B1_Mus1 SINE Alu 1 139 -9 7 1364 329 43 0 21 chr15 102225095 102225143 -1269831 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 7 1364 326 331 44 7 chr15 102225205 102225342 -1269632 - ID_B1 SINE B4 -80 144 3 7 1364 256 299 78 89 chr15 102225793 102225973 -1269001 - B4A SINE B4 -113 179 2 7 1364 239 235 0 19 chr15 102225985 102226037 -1268937 + G-rich Low_complexity Low_complexity 6 56 0 7 1364 429 185 152 48 chr15 102226043 102226168 -1268806 + B1_Mus2 SINE Alu 10 147 0 7 1364 1134 75 0 13 chr15 102226246 102226395 -1268579 - B1_Mus2 SINE Alu 0 147 1 7 1364 248 288 192 17 chr15 102226405 102226425 -1268549 - B4A SINE B4 -46 246 106 7 1364 577 180 0 0 chr15 102226425 102226525 -1268449 - PB1D9 SINE Alu 0 120 21 7 1364 229 331 136 8 chr15 102226585 102226710 -1268264 + RSINE1 SINE B4 8 148 -17 7 1364 1086 67 0 0 chr15 102227080 102227214 -1267760 + B1_Mus2 SINE Alu 1 134 -13 7 1364 282 200 150 0 chr15 102227273 102227353 -1267621 + RSINE1 SINE B4 12 103 -62 7 1364 237 65 0 0 chr15 102227394 102227425 -1267549 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 7 1364 1147 88 0 0 chr15 102227459 102227606 -1267368 + B1_Mus1 SINE Alu 2 148 0 7 1364 399 41 0 0 chr15 102227976 102228025 -1266949 + (TTTC)n Simple_repeat Simple_repeat 2 50 0 7 1364 1060 90 7 7 chr15 102228025 102228171 -1266803 - B1_Mm SINE Alu -1 146 1 7 1364 353 266 124 35 chr15 102228176 102228289 -1266685 - B1_Mur3 SINE Alu -3 146 24 7 1364 406 130 58 0 chr15 102228295 102228364 -1266610 + B2_Mm2 SINE B2 5 77 -118 7 1364 1193 54 0 0 chr15 102228364 102228511 -1266463 + B1_Mus2 SINE Alu 1 147 0 7 1364 248 275 14 0 chr15 102228683 102228752 -1266222 + B1_Mur3 SINE Alu 2 71 -78 7 1364 296 273 17 52 chr15 102228916 102229032 -1265942 + PB1D9 SINE Alu 3 114 -6 7 1364 222 151 0 36 chr15 102229321 102229334 -1265640 + A-rich Low_complexity Low_complexity 2 14 0 7 1364 496 192 130 58 chr15 102229334 102229472 -1265502 + B1_Mus1 SINE Alu 1 148 0 7 1364 222 151 0 36 chr15 102229472 102229513 -1265461 + A-rich Low_complexity Low_complexity 15 53 0 7 1364 672 196 34 20 chr15 102229636 102229782 -1265192 - B1_Mur2 SINE Alu -1 148 1 7 1364 999 109 0 26 chr15 102230790 102230927 -1264047 + B1_Mus2 SINE Alu 1 136 -11 7 1364 243 0 0 0 chr15 102230927 102230954 -1264020 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 7 1364 999 109 0 26 chr15 102230954 102230967 -1264007 + B1_Mus2 SINE Alu 137 147 0 7 1364 326 268 90 30 chr15 102230981 102231081 -1263893 + B1_Mur3 SINE Alu 11 116 -33 7 1364 398 257 19 0 chr15 102231495 102231600 -1263374 - B1F2 SINE Alu -21 128 22 7 1364 269 246 0 179 chr15 102231519 102231653 -1263321 - MT2B LTR ERVL -344 257 148 7 1364 1108 51 22 0 chr15 102232188 102232326 -1262648 - B1_Mus2 SINE Alu -6 141 1 7 1364 183 205 0 0 chr15 102232939 102232978 -1261996 + T-rich Low_complexity Low_complexity 4 42 0 7 1364 1610 42 0 15 chr15 102233008 102233203 -1261771 - B2_Mm1a SINE B2 -1 192 1 7 1364 246 279 90 52 chr15 102233336 102233491 -1261483 - RSINE1 SINE B4 -1 164 4 7 1364 540 0 0 14 chr15 102233655 102233726 -1261248 - L1Md_F3 LINE L1 -12 6572 6503 7 1364 1077 62 0 40 chr15 102233780 102233930 -1261044 + B1_Mus1 SINE Alu 5 148 0 7 1364 712 154 0 0 chr15 102233955 102234072 -1260902 + B1_Mur4 SINE Alu 34 150 0 7 1364 360 226 75 0 chr15 102234352 102234445 -1260529 + PB1D10 SINE Alu 6 105 -12 7 1364 212 312 78 0 chr15 102234445 102234480 -1260494 + ID_B1 SINE B4 87 224 0 7 1364 789 160 7 30 chr15 102234481 102234616 -1260358 + B1_Mur4 SINE Alu 6 137 -13 7 1364 367 240 14 144 chr15 102234487 102234633 -1260341 + MT2B LTR ERVL 175 301 -300 7 1364 210 143 0 0 chr15 102234653 102234688 -1260286 + (A)n Simple_repeat Simple_repeat 1 35 0 7 1364 218 318 22 30 chr15 102234699 102234800 -1260174 - B1F1 SINE Alu -47 101 1 7 1364 255 61 0 0 chr15 102234906 102234939 -1260035 + (TTTC)n Simple_repeat Simple_repeat 2 34 0 7 1364 742 55 0 44 chr15 102234939 102235053 -1259921 - B1_Mus1 SINE Alu 0 148 40 7 1364 641 203 14 28 chr15 102235092 102235234 -1259740 - B1_Mm SINE Alu -2 145 6 7 1364 297 297 0 90 chr15 102235135 102235257 -1259717 - MT2B LTR ERVL -344 257 147 7 1365 224 317 18 24 chr15 102236879 102237044 -1257930 + G-rich Low_complexity Low_complexity 3 166 0 7 1365 21 36 0 0 chr15 102237158 102237186 -1257788 + GC_rich Low_complexity Low_complexity 1 28 0 7 1365 222 314 101 8 chr15 102237564 102237683 -1257291 - B1_Mur2 SINE Alu 0 149 20 7 1365 421 262 28 0 chr15 102237761 102237868 -1257106 - PB1D7 SINE Alu -10 110 1 7 1365 277 211 158 0 chr15 102237971 102238047 -1256927 - ID_B1 SINE B4 -46 178 91 7 1365 693 210 7 0 chr15 102240625 102240763 -1254211 + B1_Mur2 SINE Alu 6 144 -5 7 1365 753 223 93 34 chr15 102240776 102240980 -1253994 + B3 SINE B2 1 216 0 7 1365 437 154 240 0 chr15 102241093 102241197 -1253777 - B1_Mus2 SINE Alu -6 141 13 7 1365 332 266 162 0 chr15 102241197 102241230 -1253744 - B4A SINE B4 -68 221 63 7 1365 785 228 5 39 chr15 102241521 102241726 -1253248 - B3A SINE B2 0 198 1 7 1365 234 0 0 0 chr15 102241733 102241759 -1253215 + (T)n Simple_repeat Simple_repeat 1 26 0 7 1365 614 81 0 0 chr15 102241759 102241846 -1253128 - B1_Mus2 SINE Alu 0 147 61 7 1365 1225 28 0 7 chr15 102241857 102242001 -1252973 - B1_Mm SINE Alu -1 146 4 7 1365 618 134 0 0 chr15 102242121 102242218 -1252756 - B1_Mus2 SINE Alu 0 147 51 7 1365 582 185 42 8 chr15 102242223 102242343 -1252631 - B1_Mur1 SINE Alu -9 140 17 7 1365 322 303 29 43 chr15 102242343 102242361 -1252613 - ID_B1 SINE B4 -9 215 80 7 1365 274 228 60 36 chr15 102242414 102242497 -1252477 + PB1D10 SINE Alu 12 95 -54 7 1365 730 172 31 8 chr15 102242493 102242622 -1252352 + B1_Mus1 SINE Alu 9 140 -8 7 1365 242 254 151 27 chr15 102242831 102242904 -1252070 + B1F1 SINE Alu 22 103 -46 7 1365 1144 62 0 0 chr15 102243040 102243184 -1251790 - B1_Mm SINE Alu 0 147 4 7 1365 1164 35 35 0 chr15 102243482 102243625 -1251349 - B1_Mus1 SINE Alu 0 148 1 7 1365 898 78 0 8 chr15 102243827 102243956 -1251018 - B1_Mus1 SINE Alu 0 148 21 7 1365 330 87 0 0 chr15 102243965 102244011 -1250963 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 7 1365 180 0 0 0 chr15 102244011 102244031 -1250943 + (CGAG)n Simple_repeat Simple_repeat 2 21 0 7 1365 326 206 125 19 chr15 102244032 102244136 -1250838 + PB1D9 SINE Alu 5 119 -1 7 1365 1049 70 42 7 chr15 102244154 102244297 -1250677 + B1_Mus1 SINE Alu 1 148 0 7 1365 188 35 35 0 chr15 102245038 102245067 -1249907 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 7 1365 1118 82 0 0 chr15 102245070 102245217 -1249757 - B1_Mus1 SINE Alu 0 148 2 7 1365 27 49 0 0 chr15 102245278 102245319 -1249655 + AT_rich Low_complexity Low_complexity 1 41 0 7 1365 271 284 179 0 chr15 102245340 102245435 -1249539 - B1F SINE Alu -29 120 9 8 1365 1414 60 44 0 chr15 102245581 102245764 -1249210 - B2_Mm1a SINE B2 -2 191 1 8 1365 1167 68 0 7 chr15 102246138 102246286 -1248688 + B1_Mus1 SINE Alu 1 147 -1 8 1365 200 0 100 0 chr15 102246287 102246317 -1248657 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 8 1365 951 97 45 0 chr15 102246479 102246613 -1248361 - B1_Mm SINE Alu -7 140 1 8 1365 420 232 386 19 chr15 102246677 102246835 -1248139 - B3 SINE B2 0 216 1 8 1365 207 100 0 0 chr15 102246848 102246878 -1248096 + (T)n Simple_repeat Simple_repeat 1 30 0 8 1365 1202 68 0 0 chr15 102246878 102247025 -1247949 - B1_Mm SINE Alu 0 147 1 8 1365 1309 96 11 0 chr15 102247038 102247215 -1247759 - B2_Mm1t SINE B2 -14 179 1 8 1365 1037 90 0 0 chr15 102247241 102247375 -1247599 - B1_Mus2 SINE Alu -11 136 3 8 1365 317 222 103 0 chr15 102247410 102247490 -1247484 + B1_Mus1 SINE Alu 1 89 -61 8 1365 522 200 117 0 chr15 102247653 102247773 -1247201 - B1_Mus2 SINE Alu 0 147 14 8 1365 225 333 0 14 chr15 102247719 102247792 -1247182 - B4 SINE B4 -140 152 81 8 1365 846 236 47 0 chr15 102247816 102248007 -1246967 - B3 SINE B2 -14 202 3 8 1365 557 340 4 107 chr15 102248095 102248310 -1246664 - B4A SINE B4 -55 237 34 8 1365 1147 64 0 0 chr15 102248310 102248451 -1246523 - B1_Mus2 SINE Alu -5 142 2 8 1365 557 340 4 107 chr15 102248451 102248498 -1246476 - B4A SINE B4 -259 33 2 8 1365 293 311 14 0 chr15 102248530 102248604 -1246370 - ID SINE ID -135 89 15 8 1365 1176 116 17 11 chr15 102248656 102248830 -1246144 + B2_Mm2 SINE B2 2 176 -19 8 1365 603 13 0 0 chr15 102248849 102248926 -1246048 - B1_Mur4 SINE Alu 0 150 74 8 1365 191 36 0 35 chr15 102248940 102248969 -1246005 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 8 1365 291 167 19 0 chr15 102249066 102249120 -1245854 - ID_B1 SINE B4 -54 170 116 8 1365 333 299 21 0 chr15 102249163 102249260 -1245714 - PB1D10 SINE Alu 0 117 19 8 1365 906 177 0 0 chr15 102249275 102249422 -1245552 - B1_Mus2 SINE Alu 0 147 1 8 1365 1248 41 0 0 chr15 102249433 102249580 -1245394 - B1_Mm SINE Alu 0 147 1 8 1365 429 230 34 75 chr15 102249864 102250010 -1244964 - B3 SINE B2 0 216 77 8 1365 405 0 0 0 chr15 102250095 102250140 -1244834 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1365 1598 32 0 11 chr15 102250477 102250664 -1244310 - B2_Mm1a SINE B2 -6 187 3 8 1365 189 94 0 0 chr15 102250686 102250718 -1244256 + (A)n Simple_repeat Simple_repeat 1 32 0 8 1365 26 64 0 0 chr15 102250732 102250779 -1244195 + AT_rich Low_complexity Low_complexity 1 47 0 8 1365 476 134 97 4 chr15 102250780 102250884 -1244090 + B3 SINE B2 1 118 -77 8 1365 31 0 0 0 chr15 102250933 102250964 -1244010 + AT_rich Low_complexity Low_complexity 1 31 0 8 1365 436 264 0 60 chr15 102250997 102251114 -1243860 - B3 SINE B2 -106 110 1 8 1365 319 232 49 0 chr15 102251205 102251287 -1243687 - PB1D10 SINE Alu -6 111 26 8 1365 844 160 14 14 chr15 102251293 102251439 -1243535 - B1_Mus2 SINE Alu -1 146 1 8 1365 219 269 58 0 chr15 102251518 102251570 -1243404 + B1F1 SINE Alu 1 55 -94 8 1365 473 189 69 30 chr15 102251737 102251868 -1243106 - B1_Mus2 SINE Alu -2 145 10 8 1365 296 98 325 26 chr15 102252148 102252262 -1242712 - B2_Mm2 SINE B2 0 195 48 8 1365 466 187 11 0 chr15 102252323 102252414 -1242560 - B2_Mm1t SINE B2 -14 179 88 8 1365 925 69 130 0 chr15 102252414 102252545 -1242429 + B1_Mus1 SINE Alu 1 148 0 8 1365 589 120 0 0 chr15 102252583 102252675 -1242299 - B2_Mm2 SINE B2 -95 100 9 8 1365 494 71 23 23 chr15 102252766 102252853 -1242121 - L1Md_F3 LINE L1 0 6584 6498 8 1365 274 295 71 31 chr15 102252951 102253049 -1241925 - PB1D10 SINE Alu -14 103 2 8 1365 305 185 22 120 chr15 102253077 102253169 -1241805 - B3 SINE B2 -6 210 128 8 1365 451 211 57 9 chr15 102253287 102253376 -1241598 - B3 SINE B2 -100 116 23 8 1365 897 154 29 12 chr15 102253376 102253547 -1241427 - URR1B DNA MER1_type -3 222 49 8 1365 180 0 0 0 chr15 102253615 102253635 -1241339 + (T)n Simple_repeat Simple_repeat 1 20 0 8 1365 1192 61 0 0 chr15 102253635 102253783 -1241191 - B1_Mus1 SINE Alu 0 148 1 8 1365 247 260 143 0 chr15 102253787 102253864 -1241110 + PB1D9 SINE Alu 18 105 -15 8 1365 228 163 0 0 chr15 102253876 102253919 -1241055 + (TG)n Simple_repeat Simple_repeat 1 43 0 8 1365 408 20 0 0 chr15 102253986 102254035 -1240939 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 1365 210 167 71 0 chr15 102254035 102254077 -1240897 - B3A SINE B2 -57 141 97 8 1365 936 68 0 8 chr15 102254124 102254257 -1240717 + B2_Mm2 SINE B2 1 132 -63 8 1365 183 80 0 0 chr15 102254257 102254282 -1240692 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1365 947 47 0 8 chr15 102254282 102254410 -1240564 - B1_Mus1 SINE Alu 0 148 22 8 1365 330 197 61 0 chr15 102254411 102254477 -1240497 + MTD LTR MaLR 91 160 -259 8 1365 319 198 196 9 chr15 102254523 102254613 -1240361 + MTD LTR MaLR 267 366 -53 8 1365 182 62 0 30 chr15 102254613 102254646 -1240328 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 8 1365 319 198 196 9 chr15 102254646 102254667 -1240307 + MTD LTR MaLR 367 398 -21 8 1365 375 250 11 11 chr15 102255284 102255373 -1239601 + PB1 SINE Alu 36 124 -3 8 1365 1109 102 78 0 chr15 102255390 102255556 -1239418 + B2_Mm2 SINE B2 1 179 -16 8 1365 567 273 16 0 chr15 102255606 102255734 -1239240 + RSINE1 SINE B4 3 132 -33 8 1365 1006 66 0 0 chr15 102255822 102255958 -1239016 - B1_Mm SINE Alu 0 147 12 8 1365 935 116 0 43 chr15 102256311 102256473 -1238501 + B2_Mm2 SINE B2 2 156 -39 8 1365 1056 97 14 0 chr15 102256551 102256695 -1238279 - B1_Mm SINE Alu 0 147 2 8 1365 1055 96 7 0 chr15 102256832 102256978 -1237996 + B1_Mus2 SINE Alu 1 147 0 8 1365 310 196 255 21 chr15 102257298 102257392 -1237582 - PB1D10 SINE Alu 0 117 2 8 1365 693 197 28 7 chr15 102257405 102257548 -1237426 - B1_Mur3 SINE Alu -2 147 2 8 1365 1008 175 80 138 chr15 102257551 102257795 -1237179 - RMER6A LTR ERVK 0 690 428 8 1365 1262 27 0 0 chr15 102257795 102257941 -1237033 - B1_Mm SINE Alu 0 147 2 8 1365 1008 166 88 137 chr15 102257941 102257967 -1237007 - RMER6A LTR ERVK -329 427 416 8 1365 1160 43 191 0 chr15 102257967 102258129 -1236845 - B2_Mm2 SINE B2 -1 194 2 8 1365 1008 179 75 139 chr15 102258129 102258247 -1236727 - RMER6A LTR ERVK -247 443 339 8 1365 322 100 0 20 chr15 102258248 102258299 -1236675 - MT2B LTR ERVL -371 230 181 8 1365 561 160 90 67 chr15 102258286 102258420 -1236554 - RMER6A LTR ERVK -550 140 4 8 1365 224 329 0 14 chr15 102258471 102258542 -1236432 - ID_B1 SINE B4 -67 157 88 8 1365 600 172 79 86 chr15 102258588 102258728 -1236246 - B1_Mus2 SINE Alu 0 147 9 8 1365 486 295 14 14 chr15 102259022 102259163 -1235811 + B1F2 SINE Alu 1 141 -8 8 1365 389 103 0 0 chr15 102259341 102259399 -1235575 + B1_Mur3 SINE Alu 85 142 -7 8 1365 419 274 95 32 chr15 102259417 102259575 -1235399 - B3A SINE B2 -27 168 1 8 1365 816 170 0 87 chr15 102259603 102259764 -1235210 + B1_Mus2 SINE Alu 1 147 0 8 1365 946 237 24 5 chr15 102259778 102259990 -1234984 + B3 SINE B2 1 216 0 8 1365 470 204 0 37 chr15 102260019 102260126 -1234848 - B1_Mur3 SINE Alu -12 137 35 8 1365 547 191 102 44 chr15 102260150 102260287 -1234687 + B1_Mur2 SINE Alu 4 148 -1 8 1365 1208 86 102 6 chr15 102260637 102260813 -1234161 + B2_Mm2 SINE B2 2 194 -1 8 1365 706 96 81 0 chr15 102260837 102260973 -1234001 + RMER17B LTR ERVK 317 463 -495 8 1365 23 33 0 0 chr15 102261121 102261151 -1233823 + AT_rich Low_complexity Low_complexity 1 30 0 8 1365 37 0 0 0 chr15 102261869 102261906 -1233068 + AT_rich Low_complexity Low_complexity 1 37 0 8 1365 237 65 0 0 chr15 102261973 102262004 -1232970 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 8 1365 616 262 50 0 chr15 102264386 102264527 -1230447 - B1F SINE Alu 0 149 2 8 1365 457 250 113 8 chr15 102264605 102264738 -1230236 - B1F1 SINE Alu -1 148 2 8 1365 22 0 0 0 chr15 102266798 102266820 -1228154 + AT_rich Low_complexity Low_complexity 1 22 0 8 1365 389 264 109 23 chr15 102267020 102267148 -1227826 + B1F SINE Alu 4 142 -7 8 1365 320 260 123 23 chr15 102267333 102267463 -1227511 - RSINE1 SINE B4 -15 150 8 8 1365 490 236 0 89 chr15 102267491 102267627 -1227347 - B1_Mur3 SINE Alu 0 149 22 8 1365 1090 190 34 10 chr15 102267627 102267834 -1227140 - B3 SINE B2 -4 212 1 8 1365 490 236 0 89 chr15 102267834 102267855 -1227119 - B1_Mur3 SINE Alu -128 21 6 8 1365 26 0 0 0 chr15 102267860 102267886 -1227088 + AT_rich Low_complexity Low_complexity 1 26 0 8 1365 351 221 45 34 chr15 102268173 102268262 -1226712 - B1F SINE Alu -7 110 21 8 1365 911 107 57 0 chr15 102268432 102268572 -1226402 - B1_Mus1 SINE Alu 0 148 1 8 1365 437 269 76 0 chr15 102268572 102268691 -1226283 + B1_Mus1 SINE Alu 14 141 -7 8 1365 226 213 0 62 chr15 102268718 102268783 -1226191 + B1_Mur4 SINE Alu 1 61 -89 8 1365 676 154 21 62 chr15 102268876 102269021 -1225953 - B1_Mur1 SINE Alu -9 140 2 8 1365 198 326 50 20 chr15 102269064 102269164 -1225810 - L2c LINE L2 0 3387 3285 8 1365 205 302 16 0 chr15 102269199 102269262 -1225712 + L2 LINE L2 1459 1522 -1897 8 1365 512 256 8 39 chr15 102269775 102269905 -1225069 + RSINE1 SINE B4 4 129 -36 8 1365 1328 81 40 0 chr15 102269960 102270133 -1224841 + B2_Mm2 SINE B2 2 181 -14 8 1365 216 67 0 0 chr15 102270133 102270163 -1224811 + (T)n Simple_repeat Simple_repeat 1 30 0 8 1365 1111 62 7 20 chr15 102270163 102270311 -1224663 - B1_Mm SINE Alu 0 147 2 9 1365 447 183 0 47 chr15 102270376 102270462 -1224512 + PB1D9 SINE Alu 22 103 -17 9 1365 503 208 71 8 chr15 102270526 102270652 -1224322 + B1_Mm SINE Alu 14 147 0 9 1365 180 125 0 0 chr15 102270653 102270685 -1224289 + (A)n Simple_repeat Simple_repeat 1 32 0 9 1365 584 217 179 6 chr15 102270694 102270856 -1224118 + B3 SINE B2 27 216 0 9 1365 25 51 0 0 chr15 102270873 102270912 -1224062 + AT_rich Low_complexity Low_complexity 1 39 0 9 1365 775 266 0 0 chr15 102270931 102271089 -1223885 + RSINE1 SINE B4 6 163 -2 9 1365 370 290 40 0 chr15 102271129 102271226 -1223748 + PB1D9 SINE Alu 3 103 -17 9 1365 624 89 27 32 chr15 102271226 102271347 -1223627 + B1_Mus1 SINE Alu 2 120 -7 9 1365 241 245 19 0 chr15 102271347 102271400 -1223574 + (TG)n Simple_repeat Simple_repeat 1 54 0 9 1365 199 79 26 26 chr15 102271542 102271552 -1223422 + (TC)n Simple_repeat Simple_repeat 2 11 0 9 1365 893 9 0 9 chr15 102271552 102271659 -1223315 + (TTC)n Simple_repeat Simple_repeat 3 108 0 9 1365 199 79 26 26 chr15 102271659 102271687 -1223287 + (TC)n Simple_repeat Simple_repeat 1 29 0 9 1365 226 194 59 88 chr15 102271786 102271854 -1223120 - MT2B LTR ERVL -314 287 222 9 1365 394 215 64 27 chr15 102271824 102271934 -1223040 - ID_B1 SINE B4 -21 203 90 9 1365 183 42 0 0 chr15 102271950 102271974 -1223000 + (CA)n Simple_repeat Simple_repeat 1 24 0 9 1365 233 337 10 39 chr15 102272009 102272111 -1222863 - B3A SINE B2 -15 183 85 9 1365 507 254 0 0 chr15 102272291 102272405 -1222569 - B1F SINE Alu -33 116 3 9 1365 1016 80 43 0 chr15 102273250 102273388 -1221586 - B1_Mur2 SINE Alu -5 144 1 9 1365 222 271 14 54 chr15 102273407 102273481 -1221493 + MIRb SINE MIR 7 77 -191 9 1365 1464 59 0 0 chr15 102273523 102273709 -1221265 + L1_Mus2 LINE L1 6381 6566 0 9 1365 1111 68 27 0 chr15 102273719 102273865 -1221109 + B1_Mur4 SINE Alu 1 150 0 9 1365 1220 74 74 6 chr15 102274167 102274343 -1220631 - B2_Mm2 SINE B2 -7 188 1 9 1365 1240 54 0 0 chr15 102274359 102274506 -1220468 - B1_Mus2 SINE Alu 0 147 1 9 1365 1287 116 5 5 chr15 102274540 102274731 -1220243 - B2_Mm1a SINE B2 -1 192 2 9 1365 715 98 35 9 chr15 102274779 102274892 -1220082 - B1_Mur2 SINE Alu -7 142 27 9 1365 835 240 83 0 chr15 102274990 102275182 -1219792 - B3 SINE B2 -7 209 2 9 1365 1234 54 0 0 chr15 102275236 102275384 -1219590 + B1_Mus1 SINE Alu 1 148 0 9 1365 228 67 0 0 chr15 102275384 102275414 -1219560 + (A)n Simple_repeat Simple_repeat 1 30 0 9 1365 216 238 0 0 chr15 102277218 102277260 -1217714 + C-rich Low_complexity Low_complexity 1 42 0 9 1365 806 184 14 0 chr15 102278035 102278182 -1216792 - B1_Mur4 SINE Alu -1 149 1 9 1365 216 167 167 0 chr15 102278240 102278294 -1216680 - L2a LINE L2 -5 3421 3359 9 1365 264 222 181 57 chr15 102278429 102278534 -1216440 + RSINE1 SINE B4 2 119 -46 9 1365 554 83 0 23 chr15 102278543 102278629 -1216345 + (TTTTC)n Simple_repeat Simple_repeat 2 85 0 9 1365 1026 79 50 0 chr15 102278629 102278769 -1216205 - B1_Mus2 SINE Alu 0 147 1 9 1365 2835 64 58 21 chr15 102278769 102279151 -1215823 - MTB LTR MaLR -4 396 1 9 1365 685 278 89 0 chr15 102279224 102279404 -1215570 - B3 SINE B2 -14 202 7 9 1365 438 250 43 26 chr15 102279487 102279602 -1215372 + PB1D10 SINE Alu 1 117 0 9 1365 476 205 0 41 chr15 102279602 102279724 -1215250 + PB1D9 SINE Alu 4 120 0 9 1365 207 307 102 0 chr15 102279817 102279905 -1215069 - MIRb SINE MIR -50 218 122 9 1365 277 260 58 5 chr15 102280174 102280261 -1214713 + B4 SINE B4 2 91 -201 9 1365 798 215 45 0 chr15 102280265 102280442 -1214532 + B3A SINE B2 1 185 -13 9 1365 1190 48 7 0 chr15 102280466 102280612 -1214362 - B1_Mm SINE Alu 0 147 1 9 1365 483 270 61 66 chr15 102280628 102280826 -1214148 - B3A SINE B2 0 198 2 9 1365 564 148 59 0 chr15 102280843 102280944 -1214030 - B1_Mur4 SINE Alu -1 149 43 9 1365 227 0 0 29 chr15 102280951 102280985 -1213989 + B1_Mm SINE Alu 113 145 -2 9 1365 450 114 34 0 chr15 102281005 102281093 -1213881 + (TTTC)n Simple_repeat Simple_repeat 1 91 0 9 1365 1441 51 0 11 chr15 102281103 102281281 -1213693 - B2_Mm2 SINE B2 -18 177 2 9 1365 238 309 103 24 chr15 102281645 102281771 -1213203 + B1F2 SINE Alu 8 143 -6 9 1365 433 263 42 60 chr15 102281792 102281958 -1213016 + RSINE1 SINE B4 3 165 0 9 1365 22 0 0 0 chr15 102281973 102281995 -1212979 + AT_rich Low_complexity Low_complexity 1 22 0 9 1365 310 307 0 0 chr15 102282183 102282258 -1212716 - PB1D10 SINE Alu -42 75 1 9 1365 288 0 0 0 chr15 102283890 102283922 -1211052 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 9 1365 1125 78 0 0 chr15 102283924 102284065 -1210909 - B1_Mus1 SINE Alu -6 142 2 9 1365 730 243 51 17 chr15 102285125 102285301 -1209673 - B3A SINE B2 -15 183 2 9 1365 28 0 0 0 chr15 102285301 102285329 -1209645 + AT_rich Low_complexity Low_complexity 1 28 0 9 1365 1165 27 0 64 chr15 102285329 102285486 -1209488 - B1_Mm SINE Alu 0 147 1 9 1365 306 0 0 0 chr15 102285495 102285529 -1209445 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 9 1365 422 236 0 70 chr15 102285529 102285643 -1209331 - B1F1 SINE Alu -10 139 34 9 1365 657 134 0 0 chr15 102285675 102285772 -1209202 - B1_Mur1 SINE Alu -13 136 40 9 1365 236 214 14 54 chr15 102285711 102285785 -1209189 - RLTR25B LTR ERVK -530 498 428 9 1365 1206 54 0 0 chr15 102285809 102285956 -1209018 - B1_Mm SINE Alu 0 147 1 9 1365 1227 54 0 0 chr15 102286021 102286168 -1208806 - B1_Mm SINE Alu 0 147 1 9 1365 357 86 0 0 chr15 102286231 102286289 -1208685 + (TG)n Simple_repeat Simple_repeat 1 58 0 9 1365 386 308 57 16 chr15 102286309 102286431 -1208543 - B3A SINE B2 -67 131 5 9 1365 472 259 41 14 chr15 102286606 102286751 -1208223 + ID_B1 SINE B4 1 149 -75 9 1365 718 263 17 11 chr15 102286786 102286967 -1208007 + B3A SINE B2 1 182 -16 9 1365 380 252 40 0 chr15 102286993 102287092 -1207882 + U6 snRNA snRNA 5 107 0 9 1365 21 0 0 0 chr15 102287104 102287125 -1207849 + AT_rich Low_complexity Low_complexity 1 21 0 9 1365 1191 124 0 63 chr15 102287163 102287356 -1207618 + B2_Mm2 SINE B2 2 182 -13 9 1365 1192 55 0 7 chr15 102287356 102287504 -1207470 + B1_Mus2 SINE Alu 1 147 0 9 1365 1191 124 0 63 chr15 102287504 102287517 -1207457 + B2_Mm2 SINE B2 183 195 0 9 1365 769 261 79 65 chr15 102287591 102287882 -1207092 - MT2B LTR ERVL -54 547 253 9 1365 252 283 31 42 chr15 102287977 102287989 -1206985 + B1_Mur1 SINE Alu 55 147 0 9 1365 312 238 24 24 chr15 102287989 102288071 -1206903 + ID_B1 SINE B4 143 224 0 9 1365 1068 52 0 7 chr15 102288075 102288211 -1206763 + B1_Mus2 SINE Alu 2 136 -11 9 1365 411 38 0 0 chr15 102288212 102288265 -1206709 + (TAAAA)n Simple_repeat Simple_repeat 3 55 0 9 1365 456 246 9 0 chr15 102288348 102288462 -1206512 - ID_B1 SINE B4 -2 222 108 9 1365 1201 61 0 0 chr15 102288462 102288609 -1206365 + B1_Mm SINE Alu 1 147 0 9 1365 378 0 0 0 chr15 102288656 102288698 -1206276 + (GA)n Simple_repeat Simple_repeat 1 42 0 9 1365 713 180 0 8 chr15 102289000 102289129 -1205845 - B1_Mus2 SINE Alu -12 135 8 9 1365 270 145 65 0 chr15 102289240 102289302 -1205672 + B3 SINE B2 147 212 -4 9 1365 278 68 45 0 chr15 102289847 102289891 -1205083 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 9 1365 967 88 73 0 chr15 102290147 102290283 -1204691 - B1_Mm SINE Alu 0 147 2 9 1365 479 137 114 29 chr15 102290304 102290409 -1204565 - B1_Mm SINE Alu 0 147 34 9 1365 971 58 72 7 chr15 102292147 102292285 -1202689 - B1_Mm SINE Alu 0 147 1 9 1365 183 80 0 0 chr15 102292603 102292628 -1202346 + (TCC)n Simple_repeat Simple_repeat 1 25 0 9 1365 24 0 0 0 chr15 102293284 102293308 -1201666 + AT_rich Low_complexity Low_complexity 1 24 0 9 1365 696 231 0 0 chr15 102293338 102293580 -1201394 + (TA)n Simple_repeat Simple_repeat 1 242 0 9 1365 387 273 98 0 chr15 102293580 102293723 -1201251 - ID_B1 SINE B4 -65 159 3 9 1365 517 199 98 8 chr15 102293887 102294019 -1200955 - B1_Mur1 SINE Alu -5 144 1 9 1365 342 67 0 0 chr15 102294101 102294146 -1200828 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 9 1365 542 89 11 0 chr15 102294146 102294235 -1200739 + (CA)n Simple_repeat Simple_repeat 2 92 0 9 1365 611 258 86 0 chr15 102294253 102294416 -1200558 - B3 SINE B2 -39 177 1 9 1365 331 312 46 0 chr15 102294423 102294532 -1200442 - PB1D10 SINE Alu -1 116 3 9 1365 262 255 10 19 chr15 102294870 102294948 -1200026 + (TA)n Simple_repeat Simple_repeat 2 79 0 9 1365 943 179 0 27 chr15 102294948 102295132 -1199842 + B2_Mm2 SINE B2 1 179 -16 9 1365 262 255 10 19 chr15 102295132 102295157 -1199817 + (TA)n Simple_repeat Simple_repeat 1 25 0 9 1365 576 240 32 58 chr15 102295161 102295184 -1199790 - B4A SINE B4 0 292 273 9 1365 324 70 0 0 chr15 102295184 102295227 -1199747 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 1365 576 240 32 58 chr15 102295227 102295358 -1199616 - B4A SINE B4 -20 272 142 9 1365 224 281 61 0 chr15 102295356 102295438 -1199536 - ID SINE ID -136 88 2 9 1365 771 223 7 0 chr15 102295451 102295599 -1199375 - B1_Mur4 SINE Alu -1 149 1 9 1365 276 228 36 48 chr15 102296039 102296054 -1198920 + PB1D7 SINE Alu 9 25 -95 1 1365 1236 102 0 46 chr15 102296054 102296249 -1198725 - B2_Mm2 SINE B2 -8 187 2 1 1365 345 185 0 30 chr15 102296249 102296316 -1198658 + PB1D9 SINE Alu 26 90 -30 1 1365 291 28 0 0 chr15 102296329 102296365 -1198609 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1365 1112 95 7 0 chr15 102296372 102296519 -1198455 + B1_Mus1 SINE Alu 1 148 0 1 1365 381 172 258 33 chr15 102296871 102296991 -1197983 + B1_Mus1 SINE Alu 2 148 0 1 1365 473 265 28 85 chr15 102296991 102297161 -1197813 - B3A SINE B2 -11 187 27 1 1365 1138 76 6 44 chr15 102297188 102297368 -1197606 + B2_Mm2 SINE B2 2 174 -21 1 1365 186 71 0 0 chr15 102297368 102297396 -1197578 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 1365 976 219 0 10 chr15 102297426 102297620 -1197354 - B3 SINE B2 -23 193 2 1 1365 212 312 109 59 chr15 102297653 102297772 -1197202 - RSINE1 SINE B4 0 165 41 1 1365 1614 36 0 10 chr15 102297848 102298042 -1196932 - B2_Mm1a SINE B2 0 193 2 1 1365 291 164 0 0 chr15 102298323 102298378 -1196596 - B2_Mm2 SINE B2 -94 101 47 1 1365 1008 152 0 0 chr15 102298447 102298611 -1196363 - B2_Mm2 SINE B2 -30 165 2 1 1365 278 68 0 43 chr15 102298718 102298764 -1196210 + (TTTC)n Simple_repeat Simple_repeat 1 44 0 1 1365 565 176 159 8 chr15 102298764 102298890 -1196084 - B1_Mm SINE Alu -1 146 2 1 1365 467 217 37 9 chr15 102299079 102299186 -1195788 + PB1D9 SINE Alu 3 112 -8 1 1365 207 0 0 0 chr15 102299186 102299209 -1195765 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 1365 391 301 91 7 chr15 102299211 102299365 -1195609 - B3A SINE B2 -11 205 39 1 1365 473 191 66 38 chr15 102299371 102299503 -1195471 - B1_Mur2 SINE Alu 0 149 19 1 1365 583 243 154 6 chr15 102299508 102299690 -1195284 - B3 SINE B2 -6 210 2 1 1365 603 255 0 46 chr15 102299697 102299849 -1195125 + RSINE1 SINE B4 20 164 -1 1 1365 252 0 0 0 chr15 102299960 102299988 -1194986 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1365 269 51 0 25 chr15 102300290 102300330 -1194644 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 1 1365 595 200 9 0 chr15 102300342 102300457 -1194517 - B1_Mus1 SINE Alu -32 116 1 1 1365 251 73 73 0 chr15 102301018 102301073 -1193901 + (CCCG)n Simple_repeat Simple_repeat 2 60 0 1 1365 304 368 0 0 chr15 102301079 102301215 -1193759 + C-rich Low_complexity Low_complexity 1 136 0 1 1365 22 35 0 0 chr15 102301482 102301511 -1193463 + GC_rich Low_complexity Low_complexity 1 29 0 1 1365 362 121 65 24 chr15 102302407 102302494 -1192480 + B1F SINE Alu 67 149 0 1 1365 329 305 36 44 chr15 102303045 102303182 -1191792 - B1F1 SINE Alu 0 149 14 1 1365 699 33 23 76 chr15 102304212 102304343 -1190631 - L1_Mus3 LINE L1 0 6638 6515 1 1365 23 0 0 0 chr15 102305219 102305242 -1189732 + AT_rich Low_complexity Low_complexity 1 23 0 1 1365 424 254 14 106 chr15 102305280 102305385 -1189589 - B3 SINE B2 -83 133 38 1 1365 1335 89 26 10 chr15 102305385 102305577 -1189397 - B2_Mm2 SINE B2 0 195 1 1 1365 424 254 14 106 chr15 102305577 102305612 -1189362 - B3 SINE B2 -179 37 6 1 1365 26 0 0 0 chr15 102305843 102305869 -1189105 + AT_rich Low_complexity Low_complexity 1 26 0 1 1365 948 70 101 0 chr15 102305874 102306003 -1188971 - B1_Mus1 SINE Alu -6 142 1 1 1365 997 48 63 0 chr15 102306132 102306258 -1188716 + B1_Mus1 SINE Alu 2 135 -13 1 1365 180 0 0 0 chr15 102306259 102306279 -1188695 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1 1365 451 139 0 0 chr15 102306344 102306423 -1188551 + B1_Mur4 SINE Alu 66 144 -6 1 1365 1064 68 0 39 chr15 102306450 102306603 -1188371 - B1_Mus1 SINE Alu -1 147 1 1 1365 287 317 18 88 chr15 102306662 102306747 -1188227 + RSINE1 SINE B4 19 102 -63 1 1365 1415 99 10 0 chr15 102306747 102306939 -1188035 + B2_Mm2 SINE B2 2 195 0 1 1365 287 317 18 88 chr15 102306939 102306967 -1188007 + RSINE1 SINE B4 103 124 -41 1 1365 402 186 58 0 chr15 102307129 102307215 -1187759 - PB1D9 SINE Alu -29 91 1 1 1365 1061 79 129 29 chr15 102307457 102307627 -1187347 - B2_Mm2 SINE B2 -8 187 1 1 1365 500 293 115 62 chr15 102307680 102307924 -1187050 - B4A SINE B4 -35 257 1 1 1365 1128 95 0 0 chr15 102307958 102308105 -1186869 + B1_Mus1 SINE Alu 2 148 0 1 1365 1059 40 47 0 chr15 102308240 102308390 -1186584 + B2_Mm1a SINE B2 37 193 0 1 1365 1198 62 0 0 chr15 102308679 102308825 -1186149 - B1_Mm SINE Alu 0 147 2 1 1365 2017 116 9 51 chr15 102309310 102309646 -1185328 - RLTRETN_Mm LTR ERVK 0 322 1 1 1365 295 209 36 73 chr15 102309838 102309941 -1185033 + B1_Mur1 SINE Alu 25 148 -1 1 1365 243 268 0 18 chr15 102309991 102310048 -1184926 + ID4_ SINE ID 21 76 -7 1 1365 225 217 0 61 chr15 102310005 102310054 -1184920 + tRNA-Ala-GCY_ tRNA tRNA 28 73 -2 1 1365 306 303 0 13 chr15 102310141 102310218 -1184756 - ID4_ SINE ID 0 83 8 1 1365 1700 26 0 0 chr15 102310412 102310605 -1184369 - B2_Mm1a SINE B2 0 193 1 1 1365 317 137 0 0 chr15 102310667 102310729 -1184245 - B1F1 SINE Alu -6 143 53 1 1365 35 0 0 0 chr15 102310756 102310791 -1184183 + AT_rich Low_complexity Low_complexity 1 35 0 1 1365 1068 116 0 0 chr15 102310791 102310938 -1184036 - B1_Mus1 SINE Alu -1 147 1 1 1365 1205 7 43 0 chr15 102311098 102311239 -1183735 - B1_Mus2 SINE Alu 0 147 1 1 1365 23 0 0 0 chr15 102311421 102311444 -1183530 + AT_rich Low_complexity Low_complexity 1 23 0 1 1365 666 128 87 8 chr15 102311474 102311600 -1183374 - B1_Mus2 SINE Alu 0 147 12 1 1365 567 171 0 0 chr15 102311729 102311834 -1183140 + (CATA)n Simple_repeat Simple_repeat 2 106 0 1 1365 677 115 9 17 chr15 102311836 102311951 -1183023 - B2_Mm2 SINE B2 -81 114 1 1 1365 203 88 29 0 chr15 102312056 102312090 -1182884 + (TATG)n Simple_repeat Simple_repeat 4 38 0 1 1365 453 254 115 0 chr15 102312097 102312227 -1182747 - B3A SINE B2 -53 145 1 1 1365 347 291 25 27 chr15 102312242 102312381 -1182593 - B1_Mus1 SINE Alu -7 141 4 1 1365 274 239 144 22 chr15 102312397 102312487 -1182487 - RSINE1 SINE B4 -4 161 61 1 1365 1188 103 0 21 chr15 102312576 102312764 -1182210 - B2_Mm2 SINE B2 -4 191 8 1 1365 1216 55 0 0 chr15 102313121 102313266 -1181708 - B1_Mus1 SINE Alu -1 147 3 1 1365 189 0 0 0 chr15 102315928 102315949 -1179025 + (TCCC)n Simple_repeat Simple_repeat 4 24 0 1 1365 1770 137 34 31 chr15 102316298 102316652 -1178322 - LFSINE_Vert SINE SINE 0 459 105 1 1365 21 36 0 0 chr15 102316659 102316687 -1178287 + AT_rich Low_complexity Low_complexity 1 28 0 1 1365 22 0 0 0 chr15 102319119 102319141 -1175833 + AT_rich Low_complexity Low_complexity 1 22 0 1 1365 279 79 0 0 chr15 102319538 102319576 -1175398 + (TTTC)n Simple_repeat Simple_repeat 2 39 0 1 1365 281 191 287 35 chr15 102320389 102320476 -1174498 + PB1D9 SINE Alu 9 117 -3 1 1365 703 188 13 46 chr15 102322048 102322199 -1172775 + B1_Mus1 SINE Alu 1 146 -2 1 1365 350 145 181 0 chr15 102323197 102323280 -1171694 + PB1D7 SINE Alu 11 108 -12 1 1365 189 0 0 0 chr15 102323356 102323377 -1171597 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1365 1251 34 0 0 chr15 102323377 102323524 -1171450 - B1_Mm SINE Alu 0 147 1 1 1365 189 0 0 0 chr15 102323619 102323640 -1171334 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1365 1076 42 7 59 chr15 102325626 102325779 -1169195 - B1_Mus2 SINE Alu -2 145 1 1 1365 279 0 0 0 chr15 102326205 102326236 -1168738 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1365 180 0 0 0 chr15 102326509 102326529 -1168445 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1365 1134 69 14 0 chr15 102326529 102326674 -1168300 - B1_Mus2 SINE Alu 0 147 1 1 1365 602 272 27 0 chr15 102326988 102327135 -1167839 - B3 SINE B2 -65 151 1 1 1365 445 284 183 36 chr15 102327520 102327595 -1167379 - B4A SINE B4 0 292 212 1 1365 1681 16 5 0 chr15 102327595 102327782 -1167192 - B2_Mm1a SINE B2 -4 189 2 1 1365 445 284 183 36 chr15 102327782 102327925 -1167049 - B4A SINE B4 -81 211 42 1 1365 25 0 0 0 chr15 102330458 102330483 -1164491 + AT_rich Low_complexity Low_complexity 1 25 0 1 1365 757 112 182 8 chr15 102333312 102333438 -1161536 - B1_Mus1 SINE Alu 0 148 1 1 1365 229 179 0 0 chr15 102333492 102333531 -1161443 + B1_Mur1 SINE Alu 82 120 -29 1 1365 222 118 0 0 chr15 102335251 102335285 -1159689 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 1365 219 208 0 131 chr15 102335292 102335353 -1159621 + ID SINE ID 22 74 -150 1 1365 215 275 0 127 chr15 102335353 102335365 -1159609 + ID4 SINE ID 34 83 0 1 1365 241 113 36 36 chr15 102336487 102336542 -1158432 + CT-rich Low_complexity Low_complexity 2 56 0 1 1365 702 85 242 17 chr15 102336544 102336664 -1158310 - B1_Mus1 SINE Alu 0 148 2 1 1365 841 229 38 33 chr15 102336717 102336929 -1158045 + B3 SINE B2 2 214 -2 1 1365 284 214 6 6 chr15 102336980 102337047 -1157927 + B1F SINE Alu 62 149 0 1 1365 429 269 119 9 chr15 102337187 102337296 -1157678 - B1_Mur2 SINE Alu -27 122 2 1 1365 29 0 0 0 chr15 102337697 102337726 -1157248 + AT_rich Low_complexity Low_complexity 1 29 0 1 1365 1250 41 0 0 chr15 102337735 102337881 -1157093 - B1_Mus2 SINE Alu 0 147 2 1 1365 950 201 103 0 chr15 102337963 102338157 -1156817 + ID_B1 SINE B4 8 221 -3 1 1365 751 219 123 0 chr15 102338158 102338345 -1156629 + ID_B1 SINE B4 2 211 -13 1 1365 276 250 0 45 chr15 102338353 102338420 -1156554 + ID_B1 SINE B4 161 224 0 1 1365 281 304 48 14 chr15 102338433 102338546 -1156428 + B1F2 SINE Alu 1 112 -5 1 1365 774 193 205 0 chr15 102339109 102339275 -1155699 + B3 SINE B2 2 201 -15 1 1365 26 0 0 0 chr15 102339283 102339309 -1155665 + AT_rich Low_complexity Low_complexity 1 26 0 1 1365 1014 212 43 19 chr15 102339626 102339833 -1155141 + ID_B1 SINE B4 3 214 -10 1 1365 216 0 0 0 chr15 102339833 102339857 -1155117 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1365 471 335 31 38 chr15 102340006 102340267 -1154707 + Lx8 LINE L1 7198 7456 -17 1 1365 651 191 24 0 chr15 102340312 102340438 -1154536 + B3 SINE B2 1 129 -87 1 1365 180 0 0 0 chr15 102340465 102340485 -1154489 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 1365 213 271 53 96 chr15 102340730 102340824 -1154150 - MIRb SINE MIR -62 206 117 1 1365 475 176 0 0 chr15 102343698 102343772 -1151202 + PB1D10 SINE Alu 40 113 -4 1 1365 917 93 195 12 chr15 102343781 102343945 -1151029 + B2_Mm2 SINE B2 2 195 0 1 1365 454 275 40 57 chr15 102343954 102344122 -1150852 + B3 SINE B2 20 174 -19 1 1365 234 279 103 0 chr15 102344167 102344235 -1150739 - PB1D10 SINE Alu -31 86 12 1 1365 450 0 0 0 chr15 102344571 102344621 -1150353 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 1365 511 222 76 8 chr15 102344637 102344755 -1150219 - B1_Mur1 SINE Alu -18 131 6 1 1365 205 374 67 22 chr15 102344859 102344993 -1149981 + MIRb SINE MIR 120 259 -9 1 1365 601 266 87 73 chr15 102345029 102345248 -1149726 - ID_B1 SINE B4 -2 222 1 1 1365 560 222 71 43 chr15 102345269 102345410 -1149564 - B1_Mur2 SINE Alu 0 149 5 1 1365 207 191 0 60 chr15 102345453 102345503 -1149471 + GA-rich Low_complexity Low_complexity 4 50 0 1 1365 236 286 46 37 chr15 102345511 102345620 -1149354 + PB1D10 SINE Alu 2 111 -6 1 1365 285 29 0 0 chr15 102345625 102345659 -1149315 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 1365 306 282 42 0 chr15 102345665 102345736 -1149238 + ID4 SINE ID 10 83 0 1 1365 224 59 29 0 chr15 102347286 102347320 -1147654 + (TCC)n Simple_repeat Simple_repeat 1 35 0 1 1365 245 316 55 19 chr15 102350006 102350126 -1144848 - MIRm SINE MIR -115 161 37 1 1365 449 239 35 17 chr15 102350272 102350387 -1144587 - MTD LTR MaLR -14 405 289 1 1365 265 62 0 0 chr15 102350427 102350459 -1144515 + MERVL_2A-int LTR ERVL 4574 4605 -1156 1 1365 698 279 43 89 chr15 102350459 102350739 -1144235 - MTD LTR MaLR -148 271 5 1 1365 236 30 30 0 chr15 102354991 102355024 -1139950 + (CAG)n Simple_repeat Simple_repeat 1 34 0 1 1365 254 286 123 31 chr15 102356256 102356386 -1138588 - L3 LINE CR1 -225 4264 4123 1 1365 220 278 0 88 chr15 102356445 102356513 -1138461 - ID4 SINE ID -68 84 17 1 1365 540 0 0 0 chr15 102356704 102356764 -1138210 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 1365 457 194 259 0 chr15 102356764 102356872 -1138102 - B1_Mur1 SINE Alu -13 136 1 1 1365 365 242 155 39 chr15 102356874 102356977 -1137997 - PB1D10 SINE Alu -1 116 2 1 1365 642 108 10 19 chr15 102357024 102357128 -1137846 + B1_Mur3 SINE Alu 46 148 -1 1 1365 967 133 35 0 chr15 102357466 102357609 -1137365 + B1_Mus1 SINE Alu 1 148 0 1 1365 1637 43 0 0 chr15 102357619 102357806 -1137168 + B2_Mm1a SINE B2 1 187 -6 1 1365 21 0 0 0 chr15 102357806 102357827 -1137147 + AT_rich Low_complexity Low_complexity 1 21 0 1 1365 507 152 205 0 chr15 102357836 102357948 -1137026 - B3A SINE B2 -61 137 3 1 1365 518 232 80 0 chr15 102358055 102358167 -1136807 - RSINE1 SINE B4 -16 149 29 1 1365 22 0 0 0 chr15 102358471 102358493 -1136481 + AT_rich Low_complexity Low_complexity 1 22 0 1 1365 698 238 20 81 chr15 102358496 102358693 -1136281 - B3A SINE B2 -10 188 4 1 1365 875 157 0 35 chr15 102359593 102359738 -1135236 - B1_Mur1 SINE Alu -1 148 9 1 1365 476 248 29 50 chr15 102360041 102360181 -1134793 - MER5A DNA MER1_type -52 137 1 1 1365 345 75 0 0 chr15 102361767 102361820 -1133154 + (CAGA)n Simple_repeat Simple_repeat 4 56 0 1 1365 225 65 0 0 chr15 102361823 102361854 -1133120 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 1365 377 259 59 43 chr15 102361867 102362100 -1132874 + L1M2 LINE L1 2153 2376 -4206 1 1365 182 231 93 62 chr15 102363713 102363810 -1131164 - L2 LINE L2 -588 2831 2732 1 1365 500 90 26 0 chr15 102365380 102365458 -1129516 + (TATG)n Simple_repeat Simple_repeat 1 80 0 1 1365 376 292 186 0 chr15 102365462 102365575 -1129399 - RSINE1 SINE B4 -16 149 16 1 1365 1248 54 0 0 chr15 102365666 102365813 -1129161 - B1_Mus2 SINE Alu 0 147 1 1 1365 302 269 82 18 chr15 102366175 102366285 -1128689 - PB1D7 SINE Alu 0 120 4 1 1365 203 288 152 0 chr15 102366423 102366489 -1128485 - L2b LINE L2 0 3375 3300 1 1365 589 270 15 0 chr15 102366914 102367051 -1127923 - B1F2 SINE Alu -9 140 2 1 1365 430 264 94 0 chr15 102367073 102367179 -1127795 - PB1D10 SINE Alu -1 116 1 1 170 436 232 62 125 chr15 102367213 102367312 -1127662 + B1_Mur2 SINE Alu 2 99 -50 1 1366 1334 111 16 10 chr15 102367312 102367504 -1127470 + B2_Mm2 SINE B2 2 194 -1 1 1366 436 232 62 125 chr15 102367504 102367532 -1127442 + B1_Mur2 SINE Alu 100 121 -28 1 1366 548 259 87 20 chr15 102367531 102367681 -1127293 - B3 SINE B2 -48 168 9 1 1366 225 330 78 47 chr15 102367682 102367873 -1127101 + L2a LINE L2 3212 3408 -18 1 1366 281 240 183 7 chr15 102368246 102368402 -1126572 + MIRm SINE MIR 31 212 -56 1 1366 413 152 52 51 chr15 102368782 102368884 -1126090 + B1_Mm SINE Alu 5 147 0 1 1366 693 199 13 33 chr15 102369249 102369400 -1125574 - B1_Mur1 SINE Alu -1 148 1 1 1366 33 25 0 0 chr15 102369408 102369448 -1125526 + AT_rich Low_complexity Low_complexity 1 40 0 1 1366 441 0 0 0 chr15 102370046 102370095 -1124879 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1366 320 286 25 25 chr15 102370113 102370192 -1124782 - RSINE1 SINE B4 -85 80 2 1 1366 1711 16 0 0 chr15 102370211 102370399 -1124575 + B2_Mm1a SINE B2 1 188 -5 1 1366 704 216 92 14 chr15 102370441 102370582 -1124392 - RSINE1 SINE B4 0 165 14 1 1366 1054 93 14 0 chr15 102370593 102370733 -1124241 - B1_Mus1 SINE Alu -5 143 2 1 1366 218 108 0 0 chr15 102370734 102370772 -1124202 - B3A SINE B2 -155 40 3 1 1366 2392 67 9 0 chr15 102371393 102371709 -1123265 + ORR1A2 LTR MaLR 1 319 -8 1 1366 387 194 41 41 chr15 102371727 102371824 -1123150 - PB1D10 SINE Alu 0 117 21 1 1366 426 244 17 25 chr15 102372172 102372290 -1122684 - ID_B1 SINE B4 0 224 108 1 1366 217 250 53 18 chr15 102372304 102372361 -1122613 - B1F1 SINE Alu -90 59 1 1 1366 620 188 76 8 chr15 102372411 102372529 -1122445 - B3 SINE B2 -90 126 1 1 1366 350 378 0 8 chr15 102372530 102372667 -1122307 - B1F SINE Alu -11 138 3 1 1366 1696 176 109 17 chr15 102372748 102373106 -1121868 - RMER10B LTR ERVL -7 391 1 1 1366 725 169 53 23 chr15 102373334 102373467 -1121507 - B1_Mur2 SINE Alu -7 142 6 1 1366 421 281 40 67 chr15 102373467 102373483 -1121491 - ID_B1 SINE B4 -7 217 73 1 1366 676 252 35 11 chr15 102373485 102373641 -1121333 - ID_B1 SINE B4 -58 234 78 1 1366 369 296 0 10 chr15 102373753 102373852 -1121122 - PB1D10 SINE Alu -5 112 15 1 1366 282 200 26 79 chr15 102373860 102373927 -1121047 - PB1D10 SINE Alu -6 111 46 1 1366 360 0 0 0 chr15 102373927 102373967 -1121007 + (TCCA)n Simple_repeat Simple_repeat 3 42 0 1 1366 219 139 0 0 chr15 102373987 102373996 -1120978 + (T)n Simple_repeat Simple_repeat 1 9 0 1 1366 726 188 49 35 chr15 102373996 102374139 -1120835 - B1_Mur3 SINE Alu 0 149 5 1 1366 219 139 0 0 chr15 102374139 102374172 -1120802 + (T)n Simple_repeat Simple_repeat 1 33 0 1 1366 35 0 0 0 chr15 102374351 102374386 -1120588 + AT_rich Low_complexity Low_complexity 1 35 0 1 1366 629 272 25 25 chr15 102374397 102374559 -1120415 - RSINE1 SINE B4 -2 163 2 1 1366 429 70 0 0 chr15 102374562 102374619 -1120355 + (TTA)n Simple_repeat Simple_repeat 2 58 0 1 1366 1067 63 35 7 chr15 102374619 102374762 -1120212 - B1_Mus1 SINE Alu -1 147 1 1 1366 849 162 0 22 chr15 102374762 102374901 -1120073 + B1_Mur2 SINE Alu 14 149 0 1 1366 332 264 42 0 chr15 102375092 102375164 -1119810 + PB1D10 SINE Alu 1 75 -42 1 1366 30 0 0 0 chr15 102375649 102375679 -1119295 + AT_rich Low_complexity Low_complexity 1 30 0 1 1366 23 68 0 0 chr15 102375776 102375820 -1119154 + AT_rich Low_complexity Low_complexity 1 44 0 1 1366 761 86 9 0 chr15 102375867 102375972 -1119002 + B2_Mm2 SINE B2 1 106 -89 1 1366 180 77 0 0 chr15 102375972 102375998 -1118976 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1366 715 157 52 0 chr15 102376004 102376119 -1118855 - B3 SINE B2 -95 121 1 1 1366 697 126 203 102 chr15 102376131 102376308 -1118666 - B2_Mm2 SINE B2 0 195 1 1 1366 1428 79 16 0 chr15 102376376 102376565 -1118409 - B2_Mm1a SINE B2 -1 192 1 1 1366 1042 89 105 17 chr15 102378332 102378504 -1116470 - B2_Mm2 SINE B2 -8 187 1 1 1366 288 253 80 0 chr15 102378740 102378815 -1116159 - ID4 SINE ID -2 81 1 1 1366 450 156 124 35 chr15 102378999 102379112 -1115862 + B1_Mus2 SINE Alu 25 147 0 1 1366 183 42 0 0 chr15 102379113 102379137 -1115837 + (TAA)n Simple_repeat Simple_repeat 1 24 0 1 1366 3088 55 0 70 chr15 102379167 102379364 -1115610 + MTA_Mm LTR MaLR 1 191 -205 1 1366 1148 70 0 0 chr15 102379364 102379506 -1115468 + B1_Mm SINE Alu 1 142 -5 1 1366 3088 55 0 70 chr15 102379506 102379734 -1115240 + MTA_Mm LTR MaLR 192 396 0 1 1366 7798 63 17 75 chr15 102379734 102380775 -1114199 + MTA_Mm-int LTR MaLR 1 959 -139 1 1366 1523 59 0 5 chr15 102380775 102380963 -1114011 - B2_Mm1t SINE B2 -5 188 2 1 1366 7798 63 17 75 chr15 102380963 102381087 -1113887 + MTA_Mm-int LTR MaLR 960 1097 -1 1 1366 3268 48 5 8 chr15 102381087 102381484 -1113490 + MTA_Mm LTR MaLR 1 396 0 1 1366 404 246 139 120 chr15 102381571 102381779 -1113195 + B3A SINE B2 5 216 0 1 1366 183 80 0 0 chr15 102382513 102382538 -1112436 + (GGGA)n Simple_repeat Simple_repeat 1 25 0 1 1366 1114 226 117 91 chr15 102382692 102382965 -1112009 + ORR1B1 LTR MaLR 1 256 -138 1 1366 1458 67 0 30 chr15 102382965 102383164 -1111810 + B2_Mm2 SINE B2 1 193 -2 1 1366 1114 226 117 91 chr15 102383164 102383274 -1111700 + ORR1B1 LTR MaLR 257 393 -1 1 1366 252 206 58 14 chr15 102383351 102383420 -1111554 - ID4 SINE ID -11 72 1 1 1366 402 330 103 35 chr15 102383523 102383808 -1111166 - B4 SINE B4 -16 276 1 1 1366 360 321 58 0 chr15 102383827 102383964 -1111010 - L1M5 LINE L1 -445 5717 5573 1 1366 334 269 52 31 chr15 102383982 102384078 -1110896 + PB1D10 SINE Alu 14 111 -6 1 1366 778 211 107 15 chr15 102385167 102385364 -1109610 - B3 SINE B2 0 216 2 1 1366 704 195 225 0 chr15 102385379 102385548 -1109426 - ID_B1 SINE B4 -4 220 14 1 1366 462 216 0 11 chr15 102385617 102385706 -1109268 - B1_Mur4 SINE Alu -7 143 56 1 1366 786 116 0 0 chr15 102385690 102385811 -1109163 + B1_Mus2 SINE Alu 27 147 0 1 1366 380 203 29 0 chr15 102385816 102385885 -1109089 - PB1D9 SINE Alu -49 71 1 1 1366 352 284 57 0 chr15 102385887 102385975 -1108999 - PB1D10 SINE Alu -10 107 15 1 1366 239 329 103 14 chr15 102385989 102386134 -1108840 - L3 LINE CR1 -289 4200 4043 1 1366 237 328 0 15 chr15 102386166 102386231 -1108743 - PB1D7 SINE Alu -37 83 20 1 1366 1156 156 0 25 chr15 102386232 102386429 -1108545 + URR1A DNA MER1_type 35 226 0 1 1366 227 297 15 15 chr15 102386553 102386618 -1108356 + B4A SINE B4 105 169 -123 1 1366 539 160 0 60 chr15 102386560 102386644 -1108330 + PB1D9 SINE Alu 27 107 -13 1 1366 180 0 0 0 chr15 102386644 102386664 -1108310 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 1366 539 160 0 60 chr15 102386664 102386679 -1108295 + PB1D9 SINE Alu 108 120 0 1 1366 608 53 5 19 chr15 102386715 102386807 -1108167 + B1_Mus2 SINE Alu 31 147 0 1 1366 384 269 28 0 chr15 102386962 102387070 -1107904 - B1F SINE Alu -1 148 38 1 1366 356 284 164 0 chr15 102387086 102387202 -1107772 - B3A SINE B2 -4 194 60 1 1366 799 295 55 39 chr15 102387313 102387567 -1107407 + B4A SINE B4 35 292 0 1 1366 523 224 26 8 chr15 102387702 102387819 -1107155 + B1F1 SINE Alu 12 130 -19 1 1366 273 230 52 139 chr15 102387819 102387864 -1107110 + MT2B2 LTR ERVL 194 324 -260 1 1366 22 56 0 0 chr15 102388030 102388066 -1106908 + AT_rich Low_complexity Low_complexity 1 36 0 1 1366 361 294 0 0 chr15 102388758 102388843 -1106131 - PB1D10 SINE Alu -32 85 1 1 1366 1648 16 0 5 chr15 102389695 102389886 -1105088 - B2_Mm1a SINE B2 -2 191 2 1 1366 869 72 184 0 chr15 102390109 102390234 -1104740 + B1_Mus1 SINE Alu 1 148 0 1 1366 1139 68 0 0 chr15 102390512 102390659 -1104315 - B1_Mus1 SINE Alu 0 148 2 1 1366 324 274 55 0 chr15 102390980 102391053 -1103921 - ID_B1 SINE B4 -37 187 111 1 1366 399 306 56 0 chr15 102391422 102391530 -1103444 + PB1D7 SINE Alu 2 115 -5 1 1366 4251 51 19 0 chr15 102391593 102392124 -1102850 + L1Md_F3 LINE L1 6030 6570 -14 1 1366 472 272 69 11 chr15 102392169 102392344 -1102630 + B3A SINE B2 11 195 -3 1 1366 818 216 0 0 chr15 102392344 102392492 -1102482 + B1_Mur1 SINE Alu 1 148 -1 1 1366 981 49 0 0 chr15 102392537 102392659 -1102315 + B1_Mus1 SINE Alu 27 148 0 1 1366 1027 227 0 54 chr15 102395104 102395327 -1099647 - B3 SINE B2 -3 213 3 1 1366 638 207 20 40 chr15 102395584 102395735 -1099239 + B1_Mur1 SINE Alu 1 148 -1 1 1366 276 318 115 26 chr15 102395898 102396011 -1098963 + B4 SINE B4 83 205 -87 1 1366 459 0 0 0 chr15 102396123 102396174 -1098800 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1366 242 122 0 0 chr15 102396244 102396283 -1098691 + Charlie4a DNA MER1_type 401 439 -69 1 1366 491 310 35 0 chr15 102396283 102396399 -1098575 + PB1D9 SINE Alu 1 120 0 1 1366 318 291 67 19 chr15 102396725 102396830 -1098144 - B1_Mus2 SINE Alu -37 110 1 1 1366 679 186 8 0 chr15 102396863 102396992 -1097982 - B1_Mur4 SINE Alu 0 150 21 1 1366 418 255 32 0 chr15 102396991 102397085 -1097889 + B1_Mur1 SINE Alu 40 136 -13 1 1366 232 363 120 8 chr15 102397104 102397121 -1097853 - B4A SINE B4 -149 143 5 1 1366 586 213 37 0 chr15 102397121 102397229 -1097745 - B3A SINE B2 -82 116 5 1 1366 324 0 0 0 chr15 102397243 102397279 -1097695 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1366 684 193 55 7 chr15 102397298 102397444 -1097530 - B3 SINE B2 -4 212 60 1 1366 605 81 0 10 chr15 102397450 102397550 -1097424 + L1_Mus2 LINE L1 6467 6565 -1 1 1366 1121 91 86 0 chr15 102397651 102397826 -1097148 - B2_Mm2 SINE B2 -3 192 3 1 1366 4571 110 25 36 chr15 102398112 102398860 -1096114 - RMER6A LTR ERVK 0 756 17 1 1366 998 128 0 0 chr15 102398986 102399127 -1095847 - B1_Mus1 SINE Alu -7 141 1 1 1366 6894 43 0 0 chr15 102399130 102399982 -1094992 - L1Md_F2 LINE L1 0 6582 5750 1 1366 231 169 0 0 chr15 102399982 102400009 -1094965 + T-rich Low_complexity Low_complexity 2 28 0 1 1366 470 207 161 17 chr15 102400270 102400388 -1094586 - B1_Mur1 SINE Alu -13 136 2 1 1366 1657 36 0 0 chr15 102400960 102401153 -1093821 + B2_Mm1t SINE B2 1 193 0 1 1366 708 196 22 0 chr15 102401221 102401359 -1093615 - B1_Mur2 SINE Alu -8 141 1 1 1366 204 154 0 25 chr15 102401845 102401885 -1093089 + (CTTTA)n Simple_repeat Simple_repeat 1 39 0 1 1366 621 268 14 34 chr15 102401916 102402063 -1092911 - RSINE1 SINE B4 -20 145 2 1 1366 247 308 98 11 chr15 102402067 102402159 -1092815 - B1F1 SINE Alu -48 101 2 1 1366 186 71 0 0 chr15 102403075 102403103 -1091871 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1 1366 1312 19 0 6 chr15 102403103 102403263 -1091711 - B2_Mm1a SINE B2 -33 160 2 1 1366 1272 80 29 0 chr15 102403281 102403456 -1091518 - B2_Mm2 SINE B2 -14 181 2 1 1366 1444 55 38 0 chr15 102403513 102403696 -1091278 + B2_Mm2 SINE B2 3 192 -3 1 1366 1852 223 51 0 chr15 102404391 102404803 -1090171 - Lx5 LINE L1 0 7050 6618 1 1366 1883 170 36 0 chr15 102404798 102405134 -1089840 + Lx5 LINE L1 6262 6609 -441 1 1366 426 263 61 0 chr15 102405223 102405322 -1089652 - B1F SINE Alu -44 105 1 1 1366 240 351 34 59 chr15 102405224 102405342 -1089632 - MT2B LTR ERVL -344 257 143 1 1366 696 206 271 0 chr15 102405388 102405558 -1089416 + B3 SINE B2 1 216 0 1 1366 468 0 0 0 chr15 102405816 102405868 -1089106 + (TTTC)n Simple_repeat Simple_repeat 3 54 0 1 1366 885 173 0 0 chr15 102405873 102406012 -1088962 - B1_Mus2 SINE Alu -8 139 1 1 1366 297 226 9 54 chr15 102406392 102406504 -1088470 - RMER17A LTR ERVK -290 461 355 1 1366 1067 201 188 17 chr15 102406547 102406835 -1088139 + ORR1D1 LTR MaLR 37 373 -1 1 1366 488 290 80 33 chr15 102406949 102407099 -1087875 + ID_B1 SINE B4 11 167 -57 1 1366 2132 227 138 21 chr15 102407099 102407896 -1087078 + Lx8 LINE L1 6581 7471 -2 1 1366 991 187 60 10 chr15 102407909 102408109 -1086865 - B3 SINE B2 -5 211 2 1 1366 266 231 14 71 chr15 102408142 102408212 -1086762 + ID_B1 SINE B4 145 210 -14 1 1366 248 77 26 0 chr15 102408216 102408255 -1086719 + (TAGA)n Simple_repeat Simple_repeat 3 42 0 1 1366 933 122 14 7 chr15 102408523 102408663 -1086311 - B1_Mur2 SINE Alu -1 148 8 1 1366 1144 155 43 10 chr15 102408690 102408898 -1086076 - B3 SINE B2 0 216 2 1 1366 315 252 1 37 chr15 102408898 102409000 -1085974 - B1_Mur2 SINE Alu -10 137 42 1 1366 754 257 37 37 chr15 102409184 102409374 -1085600 + ID_B1 SINE B4 35 224 0 1 1366 892 84 0 0 chr15 102409527 102409646 -1085328 - B1_Mus1 SINE Alu 0 148 30 1 1366 639 252 7 0 chr15 102409653 102409796 -1085178 + B1_Mus2 SINE Alu 4 147 0 1 1366 403 294 123 0 chr15 102409806 102409976 -1084998 - B3A SINE B2 -7 191 1 1 1366 23 0 0 0 chr15 102409990 102410013 -1084961 + AT_rich Low_complexity Low_complexity 1 23 0 1 1366 1285 14 0 0 chr15 102410013 102410160 -1084814 - B1_Mm SINE Alu 0 147 1 1 1366 1059 206 62 0 chr15 102410182 102410376 -1084598 - B3 SINE B2 0 216 11 1 1366 416 280 24 48 chr15 102410687 102410811 -1084163 - MLT1C LTR MaLR -8 459 339 1 1366 456 19 0 0 chr15 102410813 102410866 -1084108 + (TTCC)n Simple_repeat Simple_repeat 3 55 0 1 1366 389 179 89 49 chr15 102410866 102410989 -1083985 - RMER1B Other Other -19 1047 920 1 1366 1784 28 0 0 chr15 102410989 102411202 -1083772 + L1Md_F3 LINE L1 6358 6570 -14 1 1366 1328 198 138 1 chr15 102411322 102411653 -1083321 - RMER1B Other Other -156 910 554 1 1366 244 154 0 0 chr15 102411853 102411891 -1083083 + B3 SINE B2 94 131 -67 1 1366 736 175 83 21 chr15 102411935 102412111 -1082863 + B3 SINE B2 3 194 -1 1 1366 452 270 61 12 chr15 102412119 102412284 -1082690 + L1MC1 LINE L1 5413 5585 -748 1 1366 396 0 0 0 chr15 102412284 102412328 -1082646 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1366 505 288 85 14 chr15 102412330 102412471 -1082503 - RSINE1 SINE B4 -13 152 2 1 1366 2220 228 97 11 chr15 102412481 102413149 -1081825 + L1MC1 LINE L1 5588 6313 -20 1 1366 505 254 9 0 chr15 102413162 102413272 -1081702 + ID_B1 SINE B4 2 112 -112 1 1366 446 185 0 231 chr15 102413289 102413458 -1081516 - B1_Mus2 SINE Alu 0 147 18 1 1366 246 296 84 0 chr15 102413489 102413560 -1081414 + RSINE1 SINE B4 87 163 -2 1 1366 38 22 0 0 chr15 102413572 102413617 -1081357 + AT_rich Low_complexity Low_complexity 1 45 0 1 1366 300 321 0 51 chr15 102413630 102413748 -1081226 + PB1D7 SINE Alu 2 113 -7 1 1366 548 65 0 13 chr15 102413894 102413972 -1081002 + (GAAA)n Simple_repeat Simple_repeat 2 78 0 1 1366 328 284 0 0 chr15 102417786 102417853 -1077121 - ID_B1 SINE B4 -1 223 157 1 1366 1670 44 0 0 chr15 102418202 102418407 -1076567 + L1Md_T LINE L1 6378 6582 0 1 1366 1028 242 5 28 chr15 102418414 102418631 -1076343 + B4 SINE B4 4 215 -77 1 1366 794 290 120 22 chr15 102418636 102419003 -1075971 + Lx8 LINE L1 7071 7473 0 1 1366 308 219 92 15 chr15 102419173 102419238 -1075736 + PB1 SINE Alu 41 110 -17 1 1366 730 187 0 97 chr15 102419349 102419457 -1075517 - B1_Mus1 SINE Alu 0 148 55 1 1366 1252 111 21 5 chr15 102419457 102419647 -1075327 - B2_Mm2 SINE B2 -2 193 1 1 1366 730 187 0 97 chr15 102419647 102419692 -1075282 - B1_Mus1 SINE Alu -94 54 10 1 1366 183 42 0 0 chr15 102419795 102419819 -1075155 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1 1366 3189 40 31 36 chr15 102419821 102420265 -1074709 - L1Md_F2 LINE L1 -20 6562 6121 1 1366 750 211 16 0 chr15 102420300 102420428 -1074546 - B3A SINE B2 -66 132 3 1 1366 1040 59 15 0 chr15 102420459 102420594 -1074380 + B1_Mm SINE Alu 2 138 -9 1 1366 279 0 0 0 chr15 102420594 102420625 -1074349 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1366 304 270 10 119 chr15 102420677 102420778 -1074196 - PB1D10 SINE Alu -10 107 18 1 1366 363 195 100 33 chr15 102421423 102421513 -1073461 - BC1_Mm scRNA scRNA -53 99 4 1 1366 21 36 0 0 chr15 102421517 102421545 -1073429 + AT_rich Low_complexity Low_complexity 1 28 0 1 1366 731 256 33 11 chr15 102421559 102421741 -1073233 - B3 SINE B2 -21 195 10 1 1366 960 160 0 0 chr15 102422272 102422416 -1072558 - B1_Mur4 SINE Alu -5 145 2 1 1366 29 28 0 0 chr15 102422416 102422452 -1072522 + AT_rich Low_complexity Low_complexity 1 36 0 1 1366 331 312 177 61 chr15 102422468 102422615 -1072359 - RSINE1 SINE B4 0 165 2 1 1366 210 293 53 13 chr15 102422615 102422679 -1072295 - B1_Mur3 SINE Alu -82 67 1 1 1366 630 180 205 0 chr15 102422735 102422857 -1072117 + B1_Mur2 SINE Alu 2 148 -1 1 1366 25 0 0 0 chr15 102424717 102424742 -1070232 + AT_rich Low_complexity Low_complexity 1 25 0 1 1366 25 51 0 0 chr15 102425930 102425969 -1069005 + AT_rich Low_complexity Low_complexity 1 39 0 1 1366 21 71 0 0 chr15 102425993 102426035 -1068939 + AT_rich Low_complexity Low_complexity 1 42 0 1 1366 264 59 0 0 chr15 102426460 102426494 -1068480 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 1 1366 4442 14 0 0 chr15 102427219 102427712 -1067262 + MT2_Mm LTR ERVL 1 493 0 1 1366 38760 16 14 0 chr15 102427712 102432999 -1061975 + MERVL-int LTR ERVL 1 5360 -125 1 1366 390 167 46 35 chr15 102432999 102433086 -1061888 + ORR1A3-int LTR MaLR 553 640 -1323 1 1366 302 0 0 0 chr15 102433086 102433124 -1061850 + MERVL-int LTR ERVL 5448 5485 0 1 1366 4442 14 0 0 chr15 102433124 102433617 -1061357 + MT2_Mm LTR ERVL 1 493 0 1 1366 326 336 54 9 chr15 102433746 102433857 -1061117 + RSINE1 SINE B4 43 158 -7 1 1366 192 77 0 0 chr15 102433871 102433897 -1061077 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 1 1366 447 303 38 19 chr15 102433936 102434083 -1060891 - B3A SINE B2 -5 211 66 1 1366 22 35 0 0 chr15 102434249 102434278 -1060696 + AT_rich Low_complexity Low_complexity 1 29 0 1 1366 565 275 79 91 chr15 102434278 102434530 -1060444 + B4A SINE B4 1 249 -43 1 1366 761 230 45 117 chr15 102434711 102434933 -1060041 + B3 SINE B2 1 206 -10 1 1366 1666 16 11 0 chr15 102435090 102435281 -1059693 - B2_Mm1a SINE B2 0 193 1 1 1366 492 320 13 51 chr15 102435315 102435473 -1059501 + RSINE1 SINE B4 14 165 0 1 1366 1176 75 0 0 chr15 102435620 102435767 -1059207 + B1_Mus1 SINE Alu 2 148 0 1 1366 784 159 68 0 chr15 102436054 102436186 -1058788 + B1_Mus1 SINE Alu 3 143 -5 1 1366 291 114 0 0 chr15 102436204 102436248 -1058726 + (CAGG)n Simple_repeat Simple_repeat 4 47 0 1 1366 441 0 0 0 chr15 102436554 102436603 -1058371 + (TATG)n Simple_repeat Simple_repeat 2 50 0 1 1366 686 267 14 0 chr15 102436608 102436754 -1058220 - RSINE1 SINE B4 -16 149 2 1 1366 1338 109 0 5 chr15 102437077 102437271 -1057703 - B2_Mm2 SINE B2 -1 194 2 1 1366 250 200 42 14 chr15 102437330 102437401 -1057573 + (TATG)n Simple_repeat Simple_repeat 4 76 0 1 1366 293 256 141 35 chr15 102437418 102437560 -1057414 - B4A SINE B4 -130 162 6 1 1366 308 255 126 10 chr15 102437580 102437683 -1057291 - PB1D9 SINE Alu -1 119 5 1 1366 195 100 0 0 chr15 102438005 102438035 -1056939 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1366 305 267 73 37 chr15 102438035 102438171 -1056803 - B1F SINE Alu 0 149 9 1 1366 360 312 37 52 chr15 102438319 102438333 -1056641 - ID_B1 SINE B4 -12 212 83 1 1366 504 225 42 59 chr15 102438333 102438451 -1056523 - B1F2 SINE Alu -32 117 2 1 1366 698 183 308 0 chr15 102438456 102438625 -1056349 - ID_B1 SINE B4 -2 222 2 1 1366 244 217 0 0 chr15 102438663 102438709 -1056265 - Tigger7 DNA MER2_type -2152 339 294 1 1366 350 227 38 51 chr15 102438850 102438929 -1056045 + PB1D7 SINE Alu 27 104 -16 1 1366 404 319 82 77 chr15 102438950 102439010 -1055964 + MTD LTR MaLR 1 56 -363 1 1366 857 99 245 0 chr15 102439010 102439161 -1055813 - B2_Mm2 SINE B2 -5 190 3 1 1366 404 319 82 77 chr15 102439161 102439307 -1055667 + MTD LTR MaLR 57 208 -211 1 1366 4214 49 2 0 chr15 102439307 102439817 -1055157 + L1_Mus1 LINE L1 6057 6567 0 1 1366 708 92 10 0 chr15 102439837 102439935 -1055039 + B2_Mm2 SINE B2 4 102 -93 1 1366 447 321 54 0 chr15 102440205 102440317 -1054657 + RSINE1 SINE B4 44 161 -4 1 1366 219 36 0 0 chr15 102440322 102440350 -1054624 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 1366 1197 112 45 0 chr15 102440350 102440528 -1054446 - B2_Mm2 SINE B2 -9 186 1 1 1366 233 333 56 0 chr15 102440636 102440708 -1054266 + ID4 SINE ID 6 81 -2 1 1366 546 298 48 10 chr15 102440789 102440996 -1053978 + ID_B1 SINE B4 2 216 -8 1 1366 1221 54 0 0 chr15 102441080 102441227 -1053747 + B1_Mus1 SINE Alu 2 148 0 1 1366 274 338 13 13 chr15 102441297 102441372 -1053602 + Charlie1 DNA MER1_type 1 75 -2706 1 1366 244 324 27 36 chr15 102441372 102441484 -1053490 + Charlie1 DNA MER1_type 2165 2275 -506 1 1366 1183 75 0 0 chr15 102441484 102441631 -1053343 - B1_Mm SINE Alu 0 147 1 1 1366 544 287 0 0 chr15 102441761 102441890 -1053084 - B1F SINE Alu -11 138 10 1 1366 1479 168 25 67 chr15 102441973 102442330 -1052644 + Lx4B LINE L1 6699 7040 -18 1 1366 342 115 0 0 chr15 102442330 102442382 -1052592 + (TGAA)n Simple_repeat Simple_repeat 3 54 0 1 1366 333 255 208 38 chr15 102442420 102442526 -1052448 + RSINE1 SINE B4 29 152 -13 1 1366 348 24 0 0 chr15 102442838 102442879 -1052095 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1366 883 250 27 11 chr15 102442879 102443065 -1051909 - B3 SINE B2 -26 190 2 1 1366 284 211 0 95 chr15 102443156 102443178 -1051796 + ID_B1 SINE B4 142 217 -7 1 1366 425 145 0 0 chr15 102443178 102443240 -1051734 + B1_Mur1 SINE Alu 81 142 -7 1 1366 709 213 21 7 chr15 102443297 102443439 -1051535 + B1_Mur1 SINE Alu 1 144 -5 1 1366 1159 219 5 0 chr15 102443525 102443726 -1051248 - B3 SINE B2 -14 202 1 1 1366 271 297 53 18 chr15 102443869 102443982 -1050992 + PB1D10 SINE Alu 1 117 0 1 1366 762 271 73 47 chr15 102443994 102444269 -1050705 + B4A SINE B4 3 284 -8 1 1366 204 40 0 0 chr15 102444303 102444328 -1050646 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 1366 21 0 0 0 chr15 102444370 102444391 -1050583 + AT_rich Low_complexity Low_complexity 1 21 0 1 1366 1261 28 0 0 chr15 102444399 102444542 -1050432 + B1_Mus1 SINE Alu 1 143 -5 1 1366 243 0 0 0 chr15 102444546 102444573 -1050401 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1366 755 277 62 14 chr15 102444676 102444885 -1050089 - ID_B1 SINE B4 -5 219 1 1 1366 324 308 0 36 chr15 102444897 102445008 -1049966 - PB1D10 SINE Alu -10 107 1 1 1366 591 243 144 16 chr15 102445129 102445161 -1049813 - B3 SINE B2 -4 212 179 1 1366 402 21 0 0 chr15 102445161 102445208 -1049766 + (TATG)n Simple_repeat Simple_repeat 1 47 0 1 1366 591 243 144 16 chr15 102445208 102445363 -1049611 - B3 SINE B2 -38 178 2 1 1366 929 258 10 5 chr15 102445364 102445559 -1049415 - B3 SINE B2 -19 197 2 1 1366 180 0 0 0 chr15 102445577 102445597 -1049377 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 1366 458 274 20 46 chr15 102445626 102445779 -1049195 - B1F SINE Alu 0 149 1 1 1366 361 305 93 75 chr15 102446222 102446502 -1048472 + B4A SINE B4 4 288 -4 1 1366 350 244 25 13 chr15 102446538 102446617 -1048357 - ID4 SINE ID -1 82 3 1 1366 1052 67 0 7 chr15 102446893 102447029 -1047945 + B1_Mus1 SINE Alu 2 136 -12 1 1366 258 32 0 0 chr15 102447029 102447060 -1047914 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 1 1366 521 234 197 21 chr15 102447322 102447510 -1047464 - ID_B1 SINE B4 -3 221 1 1 1366 476 258 10 0 chr15 102448112 102448209 -1046765 - ID_B1 SINE B4 -122 102 5 1 1366 513 84 0 0 chr15 102448924 102448995 -1045979 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 1366 517 202 9 35 chr15 102449014 102449127 -1045847 + PB1D9 SINE Alu 10 119 -1 1 1366 875 158 29 0 chr15 102449210 102449349 -1045625 + B1_Mus1 SINE Alu 1 143 -5 1 1366 216 346 0 13 chr15 102449645 102449724 -1045250 + GA-rich Low_complexity Low_complexity 3 80 0 1 1366 1261 236 20 1 chr15 102449930 102450196 -1044778 + Lx5 LINE L1 6744 7044 -14 1 1366 1201 41 7 0 chr15 102450196 102450342 -1044632 + B1_Mus1 SINE Alu 1 147 -1 1 1366 1012 252 58 14 chr15 102450342 102450353 -1044621 + Lx5 LINE L1 7045 7056 -2 1 1366 305 47 0 23 chr15 102450411 102450455 -1044519 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1366 269 294 0 56 chr15 102450455 102450527 -1044447 + ID4_ SINE ID 16 83 0 1 1366 273 219 206 0 chr15 102450556 102450629 -1044345 + ID_B1 SINE B4 6 93 -131 1 1366 576 250 52 0 chr15 102450656 102450792 -1044182 + B1_Mur2 SINE Alu 7 149 0 1 1366 287 279 0 0 chr15 102450806 102450874 -1044100 + ID_B1 SINE B4 152 219 -5 1 1366 536 333 19 25 chr15 102450903 102451060 -1043914 + RSINE1 SINE B4 3 158 -7 1 1366 799 283 41 54 chr15 102451130 102451425 -1043549 + B4A SINE B4 2 292 0 1 1366 859 188 199 0 chr15 102451576 102451752 -1043222 + B3 SINE B2 1 211 -5 1 1366 23 0 0 0 chr15 102451752 102451775 -1043199 + AT_rich Low_complexity Low_complexity 1 23 0 1 1366 1146 43 22 0 chr15 102451785 102451923 -1043051 + B1_Mus1 SINE Alu 2 142 -6 1 1366 225 0 0 0 chr15 102451925 102451950 -1043024 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1 1366 562 221 22 122 chr15 102452002 102452182 -1042792 - RSINE1 SINE B4 0 165 4 1 1366 21 0 0 0 chr15 102452236 102452257 -1042717 + AT_rich Low_complexity Low_complexity 1 21 0 1 1366 738 242 121 0 chr15 102452824 102453022 -1041952 - ID_B1 SINE B4 -2 222 1 1 1366 656 232 158 38 chr15 102453945 102454129 -1040845 + ID_B1 SINE B4 2 207 -17 1 1366 201 39 0 0 chr15 102454137 102454163 -1040811 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1366 662 268 97 5 chr15 102454164 102454359 -1040615 + ID_B1 SINE B4 2 214 -10 1 1366 598 103 154 0 chr15 102456398 102456515 -1038459 + B1_Mur2 SINE Alu 8 142 -7 1 1366 321 200 86 211 chr15 102456545 102456697 -1038277 + B4 SINE B4 159 291 -1 1 1366 288 0 0 0 chr15 102457036 102457068 -1037906 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 1 1366 238 237 63 38 chr15 102457071 102457150 -1037824 - PB1D10 SINE Alu -11 106 26 1 1366 751 238 35 50 chr15 102457151 102457350 -1037624 - B3 SINE B2 -18 198 3 1 1366 253 194 0 0 chr15 102457433 102457485 -1037489 + B1_Mur4 SINE Alu 42 93 -27 1 1366 764 57 19 0 chr15 102457830 102457935 -1037039 + (TTTTC)n Simple_repeat Simple_repeat 3 109 0 1 1366 316 211 109 55 chr15 102457936 102458046 -1036928 - PB1D9 SINE Alu -1 119 4 1 1366 658 124 0 0 chr15 102458211 102458316 -1036658 - U6 snRNA snRNA -2 105 1 1 1366 932 151 207 0 chr15 102458338 102458517 -1036457 - B3 SINE B2 0 216 1 1 1366 1610 22 0 42 chr15 102458562 102458755 -1036219 + B2_Mm1a SINE B2 2 186 -7 1 1366 431 339 5 25 chr15 102458961 102459158 -1035816 + L2 LINE L2 2300 2492 -927 1 1366 500 311 53 7 chr15 102459262 102459414 -1035560 - RSINE1 SINE B4 -4 161 3 1 1366 528 236 0 0 chr15 102459418 102459524 -1035450 - ID_B1 SINE B4 -7 217 112 1 1366 358 275 74 8 chr15 102459524 102459539 -1035435 - B1_Mus2 SINE Alu -7 140 12 1 1366 1455 221 80 71 chr15 102459907 102460562 -1034412 + RMER19C LTR ERVK 1 599 -12 1 1366 1153 68 0 27 chr15 102460567 102460717 -1034257 + B1_Mus2 SINE Alu 1 146 -1 1 1366 24 53 0 0 chr15 102460717 102460755 -1034219 + AT_rich Low_complexity Low_complexity 1 38 0 1 1366 631 280 23 9 chr15 102461439 102461659 -1033315 - L1MA4 LINE L1 -369 5931 5709 1 1366 945 197 91 5 chr15 102461665 102461864 -1033110 + B3 SINE B2 1 216 0 1 1366 234 245 0 0 chr15 102462352 102462401 -1032573 - L1M4 LINE L1 -4647 2093 2045 1 1366 1097 248 47 35 chr15 102462403 102462689 -1032285 + B4 SINE B4 15 290 -2 1 1366 443 223 32 11 chr15 102462731 102462826 -1032148 - B1_Mur4 SINE Alu -47 103 7 1 1366 4515 66 5 0 chr15 102462868 102463431 -1031543 - L1_Mus1 LINE L1 0 6567 6002 1 1366 555 281 0 0 chr15 102463829 102463950 -1031024 - RSINE1 SINE B4 -42 123 3 1 1366 1512 179 37 37 chr15 102464096 102464444 -1030530 - RLTR15 LTR ERVK 0 359 12 1 1366 477 34 0 0 chr15 102464593 102464652 -1030322 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1 1366 707 162 0 107 chr15 102464652 102464811 -1030163 - B1_Mur2 SINE Alu -2 147 6 1 1366 263 214 21 106 chr15 102464731 102464825 -1030149 - MT2B LTR ERVL -361 240 155 1 1366 1435 286 34 40 chr15 102464885 102465359 -1029615 - L1M4 LINE L1 -5623 919 449 1 1366 713 276 80 43 chr15 102466732 102467008 -1027966 - L1M4 LINE L1 -6147 395 110 1 1366 278 103 136 17 chr15 102467043 102467095 -1027879 - B1F SINE Alu -7 142 84 1 1366 1315 52 0 0 chr15 102467095 102467267 -1027707 + B2_Mm2 SINE B2 2 173 -22 1 1366 789 11 0 0 chr15 102467269 102467359 -1027615 + (GAA)n Simple_repeat Simple_repeat 1 90 0 1 1366 320 287 75 0 chr15 102467360 102467454 -1027520 - B1F SINE Alu -48 101 1 1 1366 245 290 0 116 chr15 102467454 102467486 -1027488 - ID SINE ID -143 81 64 1 1366 282 305 12 12 chr15 102467486 102467569 -1027405 + RSINE1 SINE B4 1 83 -82 1 1366 351 0 0 0 chr15 102467596 102467635 -1027339 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1366 474 18 0 0 chr15 102467765 102467820 -1027154 + (TTC)n Simple_repeat Simple_repeat 2 56 0 1 1366 608 182 45 15 chr15 102467856 102467988 -1026986 - RSINE1 SINE B4 -14 151 16 1 1366 918 206 90 19 chr15 102467988 102468206 -1026768 - MT2A LTR ERVL -3 530 258 1 1366 3078 85 80 37 chr15 102468206 102468668 -1026306 - LTRIS_Mm LTR ERV1 0 482 1 1 1366 633 204 186 19 chr15 102468668 102468822 -1026152 - MT2A LTR ERVL -276 257 74 1 1366 474 81 68 0 chr15 102468812 102468886 -1026088 + B1_Mus1 SINE Alu 28 106 -42 1 1366 2452 130 19 29 chr15 102468886 102469020 -1025954 + MurERV4-int LTR ERVK 2088 2220 -3040 1 1366 3078 32 0 0 chr15 102469020 102469366 -1025608 + ORR1A0 LTR MaLR 1 346 0 1 1366 2452 130 19 29 chr15 102469366 102469650 -1025324 + MurERV4-int LTR ERVK 2221 2502 -2758 1 1366 867 141 56 0 chr15 102469642 102469784 -1025190 + MurERV4-int LTR ERVK 2788 2937 -2323 1 1366 488 142 57 9 chr15 102469780 102469884 -1025090 + MurERV4-int LTR ERVK 4782 4872 -388 1 1366 1277 20 0 0 chr15 102469889 102470036 -1024938 + B1_Mus2 SINE Alu 1 147 0 1 1366 1656 170 30 58 chr15 102470041 102470371 -1024603 + MurERV4-int LTR ERVK 4856 5176 -84 1 1366 1221 102 0 0 chr15 102470926 102471230 -1023744 + (GGAGA)n Simple_repeat Simple_repeat 1 304 0 1 1366 239 293 134 8 chr15 102471398 102471532 -1023442 + L2a LINE L2 3183 3333 -93 1 1366 22 0 0 0 chr15 102471613 102471635 -1023339 + GC_rich Low_complexity Low_complexity 1 22 0 1 1366 411 331 8 0 chr15 102471713 102471834 -1023140 - MIR SINE MIR -84 178 57 1 1366 1118 137 46 0 chr15 102471952 102472127 -1022847 + B2_Mm2 SINE B2 5 187 -8 1 1366 507 235 85 35 chr15 102472271 102472412 -1022562 + B4 SINE B4 11 158 -134 1 1366 572 250 129 29 chr15 102472463 102472603 -1022371 + RSINE1 SINE B4 12 165 0 1 1366 300 279 0 0 chr15 102472696 102472757 -1022217 + RSINE1 SINE B4 88 148 -17 1 1366 529 230 7 118 chr15 102472805 102472958 -1022016 + RSINE1 SINE B4 30 165 0 1 1366 385 69 52 0 chr15 102473398 102473456 -1021518 - ORR1A2 LTR MaLR -266 61 1 1 1366 254 247 28 93 chr15 102473534 102473641 -1021333 + PB1 SINE Alu 12 111 -16 1 1366 2636 104 23 13 chr15 102473952 102474342 -1020632 - ORR1B1 LTR MaLR 0 394 1 1 1366 283 129 186 0 chr15 102474798 102474868 -1020106 - Lx9 LINE L1 -1 7643 7561 1 1366 2058 182 49 30 chr15 102474873 102475304 -1019670 - Lx9 LINE L1 -198 7446 7008 1 1366 1272 225 127 73 chr15 102475328 102475391 -1019583 + ERVL-B4-int LTR ERVL 1596 1640 -4074 1 1366 550 262 113 0 chr15 102475391 102475532 -1019442 - RSINE1 SINE B4 -8 157 1 1 1366 1272 225 127 73 chr15 102475532 102475894 -1019080 + ERVL-B4-int LTR ERVL 1641 2044 -3670 1 1366 367 307 43 14 chr15 102475894 102476033 -1018941 + ERVL-B4-int LTR ERVL 2006 2148 -3566 1 1366 256 188 21 0 chr15 102476161 102476209 -1018765 + ERVL-B4-int LTR ERVL 2675 2723 -3034 1 1366 290 291 13 0 chr15 102476220 102476299 -1018675 - ID_B1 SINE B4 -2 222 143 1 1366 1128 268 21 10 chr15 102476352 102476642 -1018332 + ERVL-B4-int LTR ERVL 2713 3005 -2709 1 1366 1515 236 52 64 chr15 102476648 102476793 -1018181 + ERVL-int LTR ERVL 4921 5060 -697 1 1366 3540 18 5 0 chr15 102476793 102477187 -1017787 - MTA_Mm LTR MaLR 0 396 1 1 1366 1515 236 52 64 chr15 102477187 102477362 -1017612 + ERVL-int LTR ERVL 5061 5239 -518 1 1366 596 287 54 32 chr15 102477362 102477639 -1017335 + B4A SINE B4 4 286 -6 1 1366 1515 236 52 64 chr15 102477639 102477814 -1017160 + ERVL-int LTR ERVL 5240 5411 -346 1 1366 228 35 0 0 chr15 102477814 102477843 -1017131 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1366 1251 34 0 0 chr15 102477843 102477990 -1016984 - B1_Mm SINE Alu 0 147 1 1 1366 920 87 0 0 chr15 102478119 102478246 -1016728 - B1_Mus1 SINE Alu -21 127 1 1 1366 844 169 209 0 chr15 102478249 102478426 -1016548 - B3 SINE B2 0 216 3 1 1366 251 204 0 0 chr15 102478427 102478481 -1016493 + ERVL-int LTR ERVL 5481 5534 -180 1 1366 512 234 144 12 chr15 102478518 102478678 -1016296 + ERVL-int LTR ERVL 5528 5708 -6 1 1366 749 278 20 0 chr15 102478688 102478886 -1016088 + MLT2B4 LTR ERVL 5 206 -350 1 1366 522 270 8 6 chr15 102479129 102479254 -1015720 + MLT2B4 LTR ERVL 378 487 -80 1 1366 501 287 18 12 chr15 102479264 102479433 -1015541 - RMER15 LTR ERVL 0 575 406 1 1366 811 268 29 39 chr15 102479563 102479843 -1015131 - MTEb LTR MaLR -2 377 101 1 1366 495 221 0 0 chr15 102479844 102479939 -1015035 - B3A SINE B2 -102 96 2 1 1366 21 0 0 31 chr15 102479939 102479954 -1015020 + AT_rich Low_complexity Low_complexity 1 15 0 1 1366 1220 141 5 0 chr15 102479954 102480139 -1014835 - B2_Mm1a SINE B2 -7 186 1 1 1366 21 0 0 31 chr15 102480139 102480155 -1014819 + AT_rich Low_complexity Low_complexity 1 16 0 1 1366 468 0 0 0 chr15 102480157 102480209 -1014765 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 1366 636 249 97 0 chr15 102480210 102480375 -1014599 - B3A SINE B2 -16 182 2 1 1366 752 230 79 28 chr15 102480378 102480593 -1014381 - B4A SINE B4 -65 227 2 1 1366 540 222 118 7 chr15 102480622 102480758 -1014216 + RSINE1 SINE B4 1 151 -14 1 1366 339 289 67 0 chr15 102480927 102481062 -1013912 - B1F2 SINE Alu -2 147 4 1 1366 197 59 59 0 chr15 102481067 102481101 -1013873 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 1 1366 1207 84 0 11 chr15 102481101 102481281 -1013693 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1 1366 469 257 26 0 chr15 102481293 102481406 -1013568 - PB1D10 SINE Alu -1 116 1 1 1366 248 234 62 0 chr15 102481596 102481660 -1013314 + ID SINE ID 2 69 -155 1 1366 253 182 125 18 chr15 102481702 102481758 -1013216 - RSINE1 SINE B4 -100 65 4 1 1366 558 286 80 45 chr15 102481842 102482018 -1012956 - ID_B1 SINE B4 -8 216 35 1 1366 557 256 69 40 chr15 102482066 102482308 -1012666 - L1MC4 LINE L1 -490 7392 7138 1 1366 856 223 25 20 chr15 102482317 102482514 -1012460 - B3 SINE B2 -17 199 2 1 1366 1648 36 0 5 chr15 102482611 102482805 -1012169 + B2_Mm1a SINE B2 1 193 0 1 1366 1118 95 0 0 chr15 102483022 102483170 -1011804 - B1_Mus1 SINE Alu 0 148 1 1 1366 273 203 114 106 chr15 102483174 102483306 -1011668 - L1MC4 LINE L1 -1226 6816 6684 1 1366 459 0 0 0 chr15 102483667 102483718 -1011256 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1366 935 176 133 0 chr15 102483881 102484069 -1010905 + B3 SINE B2 3 215 -1 1 1366 1399 68 10 20 chr15 102484092 102484248 -1010726 + B2_Mm2 SINE B2 1 156 -39 1 1366 555 16 0 0 chr15 102484248 102484312 -1010662 + (GAAA)n Simple_repeat Simple_repeat 2 65 0 1 1366 1399 68 10 20 chr15 102484312 102484351 -1010623 + B2_Mm2 SINE B2 157 194 -1 1 1366 422 312 20 20 chr15 102484352 102484499 -1010475 + B1F SINE Alu 3 149 0 1 1366 707 245 166 45 chr15 102485124 102485479 -1009495 + L1ME1 LINE L1 5460 5857 -322 1 1366 487 309 0 14 chr15 102485661 102485799 -1009175 - B4A SINE B4 -155 137 2 1 1366 207 88 0 0 chr15 102486214 102486248 -1008726 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1366 251 244 141 8 chr15 102486630 102486645 -1008329 - B1F SINE Alu -4 145 1 1 1366 323 283 97 0 chr15 102486645 102486758 -1008216 - ID_B1 SINE B4 -19 205 82 1 1366 303 258 78 8 chr15 102486867 102486996 -1007978 - B1F SINE Alu -9 140 3 1 1366 282 242 15 15 chr15 102487984 102488051 -1006923 + ID4_ SINE ID 4 70 -13 1 1366 192 77 0 0 chr15 102488071 102488097 -1006877 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1366 307 244 25 13 chr15 102488306 102488385 -1006589 - ID4_ SINE ID -2 81 2 1 1366 186 43 0 0 chr15 102488987 102489010 -1005964 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1366 1300 14 0 0 chr15 102489010 102489156 -1005818 - B1_Mm SINE Alu 0 147 2 1 1366 249 304 212 12 chr15 102489462 102489622 -1005352 - MLT1E2 LTR MaLR -293 334 143 1 1366 338 200 14 0 chr15 102489805 102489875 -1005099 - PB1D10 SINE Alu -7 110 40 1 1366 658 221 29 0 chr15 102490003 102490139 -1004835 + RSINE1 SINE B4 2 141 -24 1 1366 1950 107 32 3 chr15 102490563 102490873 -1004101 + ORR1A2 LTR MaLR 1 319 -8 1 1366 474 124 8 160 chr15 102490914 102491039 -1003935 - B1_Mus2 SINE Alu -1 146 41 1 1366 241 164 0 127 chr15 102491000 102491063 -1003911 - RLTR25A LTR ERVK -548 555 501 1 1366 783 172 0 36 chr15 102491395 102491534 -1003440 - B1_Mus2 SINE Alu -12 135 2 1 1366 189 0 0 0 chr15 102491734 102491755 -1003219 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1366 504 301 39 25 chr15 102492534 102492733 -1002241 - ID_B1 SINE B4 -4 288 89 1 1366 292 322 6 51 chr15 102492598 102492755 -1002219 + YREP_Mm Unknown Unknown 177 326 -1486 1 1366 198 321 83 31 chr15 102492759 102492952 -1002022 - L2 LINE L2 -550 2869 2667 1 1366 264 170 0 0 chr15 102493085 102493132 -1001842 + B3 SINE B2 162 208 -8 1 1366 523 277 7 0 chr15 102494988 102495125 -999849 - ID_B1 SINE B4 -4 220 83 1 1366 321 247 97 43 chr15 102495164 102495257 -999717 + PB1D9 SINE Alu 1 98 -22 1 1366 216 0 0 0 chr15 102496394 102496418 -998556 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1366 502 118 42 31 chr15 102496432 102496528 -998446 + PB1D9 SINE Alu 22 118 -2 1 1366 678 215 170 28 chr15 102496536 102496718 -998256 + B3 SINE B2 2 209 -7 1 1366 414 230 20 10 chr15 102496772 102496873 -998101 - PB1 SINE Alu -11 116 15 1 1366 356 271 147 47 chr15 102497284 102497474 -997500 - ID_B1 SINE B4 -14 210 2 1 1366 921 244 25 0 chr15 102497490 102497691 -997283 - B3 SINE B2 -10 206 1 1 1366 241 284 128 11 chr15 102497711 102497865 -997109 + MIRb SINE MIR 83 261 -7 1 1367 427 238 33 7 chr15 102498545 102498647 -996327 + PB1D7 SINE Alu 20 118 -31 1 1367 409 305 66 7 chr15 102499079 102499231 -995743 + RSINE1 SINE B4 3 163 -2 1 1367 648 232 82 18 chr15 102499256 102499427 -995547 - B3 SINE B2 -34 182 1 1 1367 263 254 0 29 chr15 102499580 102499649 -995325 - ID4 SINE ID -13 70 4 1 1367 361 240 98 20 chr15 102499835 102499937 -995037 + PB1D9 SINE Alu 2 111 -9 1 1367 364 302 101 0 chr15 102500273 102500402 -994572 + PB1D10 SINE Alu 1 142 -7 1 1367 32 0 0 0 chr15 102502594 102502626 -992348 + GC_rich Low_complexity Low_complexity 1 32 0 2 1367 526 235 76 57 chr15 102503544 102503702 -991272 + MIRb SINE MIR 91 251 -17 3 1367 692 216 98 80 chr15 102504567 102504814 -990160 + L1MA7 LINE L1 5997 6263 -28 4 1367 563 195 130 23 chr15 102504814 102504945 -990029 - B1_Mur2 SINE Alu 0 149 5 5 1367 692 216 98 80 chr15 102504945 102504984 -989990 + L1MA7 LINE L1 6264 6288 -3 4 1367 751 156 117 0 chr15 102504993 102505121 -989853 + B1_Mur2 SINE Alu 1 143 -6 6 1367 357 125 0 0 chr15 102505139 102505195 -989779 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 1367 234 286 95 56 chr15 102505259 102505385 -989589 + MIRc SINE MIR 2 132 -136 8 1367 256 247 37 49 chr15 102505517 102505598 -989376 - ID4_ SINE ID -2 81 2 9 1367 576 176 0 0 chr15 102506020 102506133 -988841 + T-rich Low_complexity Low_complexity 7 119 0 1 1367 1194 75 0 0 chr15 102506133 102506280 -988694 - B1_Mus2 SINE Alu 0 147 1 1 1367 345 196 0 0 chr15 102506294 102506350 -988624 - B1_Mur4 SINE Alu -61 89 34 1 1367 339 252 145 8 chr15 102506352 102506476 -988498 - B1F2 SINE Alu -6 143 3 1 1367 870 132 240 6 chr15 102506596 102506771 -988203 + B3 SINE B2 1 216 0 1 1367 711 255 78 5 chr15 102506867 102507060 -987914 + B3 SINE B2 4 210 -6 1 1367 254 206 0 16 chr15 102507071 102507135 -987839 + GA-rich Low_complexity Low_complexity 2 64 0 1 1367 3179 53 27 20 chr15 102507237 102507641 -987333 - MTB_Mm LTR MaLR 0 407 1 1 1367 736 177 48 28 chr15 102507663 102507808 -987166 - B1_Mur1 SINE Alu -1 148 1 1 1367 450 163 46 11 chr15 102507838 102507925 -987049 - PB1D10 SINE Alu -7 110 21 1 1367 292 262 131 0 chr15 102507942 102508026 -986948 + MIRm SINE MIR 75 169 -107 2 1367 860 145 0 65 chr15 102508190 102508345 -986629 + B1_Mus2 SINE Alu 3 147 0 2 1367 685 193 50 29 chr15 102508654 102508793 -986181 + B1_Mur1 SINE Alu 1 142 -7 2 1367 441 278 0 0 chr15 102508805 102508912 -986062 + B1F SINE Alu 1 107 -13 2 1367 644 229 6 0 chr15 102508933 102509099 -985875 + (TA)n Simple_repeat Simple_repeat 1 167 0 2 1367 252 242 127 16 chr15 102509111 102509174 -985800 - ID4 SINE ID -2 81 12 2 1367 195 333 15 0 chr15 102509193 102509259 -985715 - L2a LINE L2 -20 3406 3340 2 1367 225 0 0 0 chr15 102509261 102509286 -985688 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 2 1367 297 276 0 0 chr15 102509289 102509347 -985627 + ID4 SINE ID 19 76 -7 2 1367 289 254 0 60 chr15 102509292 102509359 -985615 + ID SINE ID 23 85 -139 2 1367 311 399 59 21 chr15 102509448 102509686 -985288 - L1ME3A LINE L1 -117 6056 5810 3 1367 331 355 14 47 chr15 102509789 102509865 -985109 + ID SINE ID 10 80 -144 3 1367 241 281 0 35 chr15 102509865 102509950 -985024 + PB1D10 SINE Alu 1 82 -35 3 1367 481 174 76 0 chr15 102509960 102510052 -984922 + B2_Mm2 SINE B2 32 130 -65 3 1367 216 0 0 0 chr15 102510078 102510102 -984872 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 3 1367 701 146 0 35 chr15 102510104 102510218 -984756 + B1_Mur4 SINE Alu 28 137 -13 3 1367 207 0 0 0 chr15 102510218 102510241 -984733 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1367 936 136 7 39 chr15 102510248 102510401 -984573 + B1_Mur4 SINE Alu 2 149 -1 3 1367 755 236 10 20 chr15 102510517 102510716 -984258 - L1ME3A LINE L1 -701 5472 5276 3 1367 359 237 3 68 chr15 102510736 102510842 -984132 - B4 SINE B4 -4 288 93 3 1367 541 213 83 0 chr15 102510865 102510955 -984019 - B3 SINE B2 -9 207 109 3 1367 656 87 135 0 chr15 102510955 102511059 -983915 + B2_Mm2 SINE B2 1 118 -77 4 1367 641 231 15 23 chr15 102511038 102511171 -983803 - B3A SINE B2 -66 132 1 4 1367 708 250 83 64 chr15 102511183 102511401 -983573 - B4 SINE B4 -69 223 2 3 1367 420 229 57 9 chr15 102511410 102511516 -983458 - B1F SINE Alu -6 143 33 4 1367 304 61 0 75 chr15 102511551 102511604 -983370 + HAL1-3A_ME LINE L1 1974 2022 -836 4 1367 350 203 0 8 chr15 102511615 102511739 -983235 + (CA)n Simple_repeat Simple_repeat 2 124 0 4 1367 383 168 53 114 chr15 102511751 102511865 -983109 + MT2B LTR ERVL 172 278 -323 4 1367 864 126 16 0 chr15 102511765 102511892 -983082 + B1_Mur4 SINE Alu 22 150 0 4 1367 197 159 0 22 chr15 102511903 102511948 -983026 + (TAA)n Simple_repeat Simple_repeat 2 45 0 4 1367 524 229 0 17 chr15 102512207 102512327 -982647 - PB1D7 SINE Alu -2 118 1 4 1367 241 232 0 18 chr15 102512339 102512396 -982578 - tRNA-Ala-GCY_ tRNA tRNA -19 56 1 4 1367 214 0 0 157 chr15 102512437 102512539 -982435 + (CAGAG)n Simple_repeat Simple_repeat 5 90 0 5 1367 227 183 89 79 chr15 102512540 102512641 -982333 + RLTR25B LTR ERVK 397 498 -530 5 1367 635 167 0 44 chr15 102512580 102512693 -982281 + B1_Mur4 SINE Alu 43 150 0 5 1367 550 290 0 8 chr15 102512793 102512918 -982056 - B3A SINE B2 -69 129 6 5 1367 563 292 139 96 chr15 102512961 102513241 -981733 - B4A SINE B4 0 292 1 5 1367 381 333 0 9 chr15 102513419 102513531 -981443 - PB1D10 SINE Alu 0 117 7 5 1367 843 282 19 14 chr15 102513565 102513774 -981200 + ID_B1 SINE B4 11 220 -4 5 1367 345 82 0 0 chr15 102513824 102513873 -981101 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 5 1367 222 219 0 0 chr15 102513876 102513917 -981057 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 5 1367 427 252 17 34 chr15 102513974 102514093 -980881 - BC1_Mm scRNA scRNA -35 117 1 5 1367 985 75 90 0 chr15 102514576 102514710 -980264 + B1_Mus2 SINE Alu 2 147 0 6 1367 336 24 0 0 chr15 102514710 102514751 -980223 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 6 1367 387 47 0 99 chr15 102514836 102514907 -980067 + RMER4A LTR ERVK 3 66 -519 6 1367 1326 67 0 16 chr15 102514908 102515065 -979909 + B2_Mm1a SINE B2 2 158 -35 6 1367 270 0 0 0 chr15 102515065 102515095 -979879 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 6 1367 1326 67 0 16 chr15 102515095 102515120 -979854 + B2_Mm1a SINE B2 159 181 -12 6 1367 2239 144 49 39 chr15 102515106 102515517 -979457 + RMER4A LTR ERVK 52 466 0 6 1367 252 304 68 25 chr15 102515935 102516053 -978921 - MER115 DNA Tip100 0 693 571 6 1367 384 284 95 0 chr15 102516046 102516162 -978812 + RSINE1 SINE B4 30 156 -9 6 1367 405 0 0 0 chr15 102516169 102516214 -978760 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1367 228 351 95 78 chr15 102516444 102516623 -978351 - MER115 DNA Tip100 -465 228 47 6 1367 272 239 164 0 chr15 102516676 102516743 -978231 + MIRc SINE MIR 113 190 -78 6 1367 252 0 0 0 chr15 102516744 102516772 -978202 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 6 1367 474 18 0 0 chr15 102517416 102517471 -977503 + (TA)n Simple_repeat Simple_repeat 1 55 0 7 1367 522 254 16 53 chr15 102517739 102517926 -977048 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1367 209 262 32 16 chr15 102517885 102517947 -977027 + (CATG)n Simple_repeat Simple_repeat 4 66 0 7 1367 601 298 67 70 chr15 102517951 102518236 -976738 - B4 SINE B4 -7 285 2 7 1367 206 225 0 0 chr15 102518423 102518463 -976511 + CT-rich Low_complexity Low_complexity 5 44 0 7 1367 666 186 34 0 chr15 102518463 102518581 -976393 - B1_Mur1 SINE Alu -16 133 12 7 1367 1054 176 60 5 chr15 102518599 102518799 -976175 - B3 SINE B2 0 216 6 7 1367 293 320 0 0 chr15 102518837 102518912 -976062 - ID4 SINE ID -7 76 2 7 1367 1561 52 16 0 chr15 102518963 102519154 -975820 - B2_Mm2 SINE B2 -1 194 1 7 1367 308 324 59 0 chr15 102519212 102519314 -975660 + PB1 SINE Alu 17 124 -3 7 1367 30 45 0 0 chr15 102519380 102519424 -975550 + AT_rich Low_complexity Low_complexity 1 44 0 8 1367 1065 230 14 5 chr15 102519440 102519654 -975320 + B3 SINE B2 1 216 0 8 1367 1331 111 16 0 chr15 102519681 102519870 -975104 + B2_Mm2 SINE B2 2 193 -2 8 1367 1443 47 25 59 chr15 102519892 102520094 -974880 - B2_Mm2 SINE B2 0 195 1 8 1367 235 0 57 0 chr15 102520132 102520167 -974807 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 8 1367 1174 74 0 13 chr15 102520167 102520307 -974667 - B1_Mus1 SINE Alu -9 139 1 8 1367 785 201 0 27 chr15 102520406 102520554 -974420 + B1_Mur2 SINE Alu 5 148 -1 8 1367 725 117 0 8 chr15 102521433 102521562 -973412 + (GGGAGA)n Simple_repeat Simple_repeat 6 133 0 8 1367 261 57 0 0 chr15 102521929 102521964 -973010 + (TC)n Simple_repeat Simple_repeat 2 36 0 8 1367 298 139 40 40 chr15 102522102 102522177 -972797 + C-rich Low_complexity Low_complexity 5 79 0 8 1367 21 0 0 0 chr15 102523239 102523260 -971714 + AT_rich Low_complexity Low_complexity 1 21 0 9 1367 216 0 0 0 chr15 102524822 102524846 -970128 + (A)n Simple_repeat Simple_repeat 1 24 0 9 1367 304 171 63 38 chr15 102525779 102525858 -969116 + ID4 SINE ID 1 81 -2 9 1367 207 107 0 0 chr15 102526378 102526406 -968568 - L2c LINE L2 -16 3371 3344 9 1367 445 313 55 46 chr15 102527523 102527761 -967213 - L3 LINE CR1 -28 4461 4222 9 1367 344 118 0 14 chr15 102528217 102528286 -966688 + (GA)n Simple_repeat Simple_repeat 1 68 0 9 1367 477 160 0 0 chr15 102529669 102529794 -965180 + GA-rich Low_complexity Low_complexity 2 126 0 9 1367 337 305 62 21 chr15 102530427 102530571 -964403 + L3 LINE CR1 4337 4486 -3 9 1367 358 286 88 39 chr15 102530849 102530951 -964023 + B1F1 SINE Alu 5 111 -38 9 1367 575 224 6 0 chr15 102530993 102531172 -963802 + (TG)n Simple_repeat Simple_repeat 1 180 0 9 1367 251 281 12 12 chr15 102531544 102531717 -963257 + (TG)n Simple_repeat Simple_repeat 2 174 0 1 1367 269 261 14 66 chr15 102531806 102531897 -963077 - PB1D10 SINE Alu -57 92 1 1 1367 356 21 42 0 chr15 102531945 102531993 -962981 + (GAAAA)n Simple_repeat Simple_repeat 2 51 0 1 1367 535 331 0 8 chr15 102532112 102532243 -962731 + ID_B1 SINE B4 9 138 -86 1 1367 509 258 152 30 chr15 102532235 102532399 -962575 + B4A SINE B4 24 207 -85 1 1367 465 19 0 0 chr15 102532473 102532527 -962447 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1367 307 119 0 29 chr15 102532527 102532596 -962378 + (GAAA)n Simple_repeat Simple_repeat 4 70 0 1 1367 482 252 77 53 chr15 102532846 102533062 -961912 - MER33 DNA MER1_type -2420 204 1 1 1367 344 204 222 10 chr15 102533086 102533185 -961789 + PB1 SINE Alu 6 125 -2 1 1367 237 33 0 0 chr15 102533262 102533292 -961682 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1 1367 758 151 71 0 chr15 102533292 102533418 -961556 - B1_Mus1 SINE Alu -13 135 1 1 1367 563 271 66 7 chr15 102533487 102533639 -961335 - RSINE1 SINE B4 0 165 5 1 1367 465 186 85 85 chr15 102534017 102534123 -960851 - B3 SINE B2 -109 107 2 1 1367 523 194 173 18 chr15 102534270 102534380 -960594 + B3 SINE B2 90 216 0 1 1367 674 159 0 6 chr15 102534381 102534546 -960428 + (TAGA)n Simple_repeat Simple_repeat 4 167 0 1 1367 466 202 19 8 chr15 102534548 102534664 -960310 + B1_Mus2 SINE Alu 1 147 0 1 1367 243 291 42 112 chr15 102535004 102535147 -959827 - B1F2 SINE Alu -2 147 15 1 1367 183 222 0 0 chr15 102536233 102536278 -958696 + G-rich Low_complexity Low_complexity 6 50 0 1 1367 189 0 0 0 chr15 102537447 102537468 -957506 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1367 308 206 143 0 chr15 102539293 102539356 -955618 - B1_Mur1 SINE Alu -11 138 67 1 1367 225 0 0 0 chr15 102540525 102540550 -954424 + (CCCCCA)n Simple_repeat Simple_repeat 4 28 0 1 1367 264 268 36 0 chr15 102542313 102542369 -952605 - B1F2 SINE Alu -90 59 2 1 1367 845 161 7 39 chr15 102542664 102542819 -952155 - B1_Mur4 SINE Alu 0 150 1 1 1367 596 188 71 0 chr15 102543006 102543118 -951856 - PB1D7 SINE Alu 0 120 1 1 1367 219 69 0 0 chr15 102543212 102543241 -951733 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1367 371 229 23 57 chr15 102543541 102543629 -951345 - PB1D10 SINE Alu -32 85 1 1 1367 267 175 0 0 chr15 102543662 102543719 -951255 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 1367 265 194 24 183 chr15 102543719 102543801 -951173 - B4A SINE B4 0 292 224 1 1367 1243 28 7 0 chr15 102544109 102544253 -950721 + B1_Mm SINE Alu 3 147 0 1 1367 898 109 58 14 chr15 102544480 102544619 -950355 - B1_Mus2 SINE Alu -2 145 1 1 1367 392 317 40 33 chr15 102544720 102544870 -950104 - MER58B DNA MER1_type -79 262 112 1 1367 252 0 0 0 chr15 102545089 102545117 -949857 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1367 357 216 101 11 chr15 102545143 102545232 -949742 - B1F SINE Alu -24 125 29 1 1367 983 161 0 0 chr15 102545355 102545504 -949470 + B1_Mur2 SINE Alu 1 149 0 1 1367 264 298 11 112 chr15 102545593 102545692 -949282 - ID4_ SINE ID -60 92 4 1 1367 233 243 0 14 chr15 102545758 102545829 -949145 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 1367 186 43 0 0 chr15 102546863 102546886 -948088 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 1367 762 241 0 29 chr15 102547493 102547664 -947310 + B3A SINE B2 2 167 -31 1 1367 430 304 24 60 chr15 102547714 102547882 -947092 + RSINE1 SINE B4 4 165 0 1 1367 346 287 16 57 chr15 102547929 102548051 -946923 - MER33 DNA MER1_type -202 122 6 1 1367 269 297 38 38 chr15 102548734 102548839 -946135 - MIRb SINE MIR -155 113 9 1 1367 407 266 10 18 chr15 102548982 102549101 -945873 - PB1 SINE Alu -7 120 2 1 1367 36 0 0 0 chr15 102549202 102549238 -945736 + AT_rich Low_complexity Low_complexity 1 36 0 1 1367 1210 68 0 0 chr15 102549238 102549385 -945589 - B1_Mus1 SINE Alu 0 148 2 1 1367 1205 111 17 11 chr15 102549609 102549783 -945191 + B2_Mm2 SINE B2 1 175 -20 1 1367 183 156 0 0 chr15 102551260 102551292 -943682 + (TAA)n Simple_repeat Simple_repeat 3 34 0 1 1367 271 341 0 0 chr15 102551351 102551433 -943541 + RSINE1 SINE B4 84 165 0 1 1367 186 43 0 0 chr15 102552025 102552048 -942926 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1367 416 19 19 0 chr15 102553188 102553241 -941733 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1367 185 0 40 0 chr15 102553455 102553480 -941494 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1367 415 295 9 9 chr15 102553621 102553734 -941240 + PB1D7 SINE Alu 1 113 -7 1 1367 210 176 0 0 chr15 102553819 102553870 -941104 + T-rich Low_complexity Low_complexity 1 51 0 1 1367 375 315 62 8 chr15 102554186 102554314 -940660 - MIR SINE MIR -86 176 42 1 1367 1255 86 6 22 chr15 102554586 102554600 -940374 + B2_Mm2 SINE B2 1 12 -183 1 1367 864 74 141 0 chr15 102554600 102554721 -940253 - B1_Mus1 SINE Alu -9 139 2 1 1367 1255 86 6 22 chr15 102554721 102554885 -940089 + B2_Mm2 SINE B2 13 176 -19 1 1367 576 327 30 6 chr15 102555045 102555214 -939760 + ID_B1 SINE B4 49 221 -3 1 1367 237 361 21 25 chr15 102555212 102555330 -939644 + RSINE1 SINE B4 1 115 -177 1 1367 1429 67 0 20 chr15 102555330 102555527 -939447 - B2_Mm2 SINE B2 0 195 3 1 1367 217 366 16 70 chr15 102555527 102555593 -939381 + B4 SINE B4 116 175 -117 1 1367 1154 64 56 19 chr15 102555616 102555776 -939198 + B2_Mm2 SINE B2 2 167 -28 1 1367 512 56 14 0 chr15 102555860 102555932 -939042 + (CA)n Simple_repeat Simple_repeat 1 73 0 1 1367 984 236 10 0 chr15 102555963 102556166 -938808 + B3 SINE B2 3 207 -9 1 1367 1119 218 0 23 chr15 102556190 102556411 -938563 + B3 SINE B2 1 216 0 1 1367 1286 124 0 20 chr15 102556412 102556609 -938365 - B2_Mm2 SINE B2 -1 194 2 1 1367 1118 82 7 0 chr15 102556640 102556787 -938187 + B1_Mus1 SINE Alu 1 148 0 1 1367 1526 48 5 0 chr15 102556833 102557020 -937954 - B2_Mm1t SINE B2 -5 188 1 1 1367 1239 67 38 32 chr15 102557028 102557213 -937761 - B2_Mm2 SINE B2 -8 187 2 1 1367 318 338 36 29 chr15 102557282 102557299 -937675 + ID_B1 SINE B4 79 219 -5 1 1367 361 289 49 16 chr15 102557299 102557422 -937552 + B1F SINE Alu 18 144 -5 1 1367 406 250 0 0 chr15 102557423 102557503 -937471 + ID4_ SINE ID 4 83 0 1 1367 1275 94 33 0 chr15 102557640 102557821 -937153 - B2_Mm1t SINE B2 -6 187 1 1 1367 800 150 7 29 chr15 102557904 102558041 -936933 - B1_Mur2 SINE Alu -2 147 14 1 1367 481 210 170 0 chr15 102558101 102558201 -936773 - RSINE1 SINE B4 -34 131 15 1 1367 732 196 45 0 chr15 102558236 102558369 -936605 - B1_Mur2 SINE Alu -9 140 2 1 1367 183 262 0 0 chr15 102558836 102558878 -936096 - MIRb SINE MIR -7 261 220 1 1367 606 202 19 0 chr15 102558955 102559059 -935915 + PB1D7 SINE Alu 2 107 -13 1 1367 3147 56 5 39 chr15 102559293 102559349 -935625 - MTA_Mm LTR MaLR 0 396 353 1 1367 1470 39 78 0 chr15 102559349 102559509 -935465 + B2_Mm1t SINE B2 1 160 -33 1 1367 351 0 0 0 chr15 102559509 102559548 -935426 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 1 1367 1470 39 78 0 chr15 102559548 102559566 -935408 + B2_Mm1t SINE B2 161 191 -2 1 1367 3147 56 5 39 chr15 102559566 102559919 -935055 - MTA_Mm LTR MaLR -44 352 1 1 1367 220 319 19 87 chr15 102560143 102560246 -934728 + B1F SINE Alu 54 149 0 1 1367 490 235 0 19 chr15 102560361 102560465 -934509 - PB1 SINE Alu -5 122 21 1 1367 401 299 61 10 chr15 102560469 102560567 -934407 - ID_B1 SINE B4 -29 195 93 1 1367 852 261 69 154 chr15 102560614 102560798 -934176 - MTE2b LTR MaLR -1 378 193 1 1367 402 21 0 0 chr15 102560798 102560845 -934129 + (TC)n Simple_repeat Simple_repeat 1 47 0 1 1367 852 261 69 154 chr15 102560845 102561050 -933924 - MTE2b LTR MaLR -187 192 22 1 1367 236 236 17 52 chr15 102561155 102561213 -933761 - ORR1E LTR MaLR -32 364 309 1 1367 234 250 31 0 chr15 102561391 102561455 -933519 - MLT1A1 LTR MaLR -271 137 72 1 1367 365 242 148 20 chr15 102561539 102561640 -933334 + PB1D10 SINE Alu 2 115 -2 1 1367 309 109 0 0 chr15 102561749 102561795 -933179 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1367 794 161 0 22 chr15 102561814 102561998 -932976 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1367 201 121 0 0 chr15 102562025 102562058 -932916 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1367 758 172 0 11 chr15 102562082 102562264 -932710 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1367 336 171 0 0 chr15 102562281 102562363 -932611 + (TG)n Simple_repeat Simple_repeat 2 83 0 1 1367 309 291 217 7 chr15 102562811 102562963 -932011 + B4A SINE B4 107 290 -2 1 1367 341 291 23 50 chr15 102563553 102563724 -931250 - ORR1E LTR MaLR -193 166 1 1 1367 653 233 95 30 chr15 102564049 102564217 -930757 - RMER30 DNA MER1_type -1 201 23 1 1367 210 100 0 0 chr15 102565001 102565031 -929943 + PB1D9 SINE Alu 2 31 -89 1 1367 919 103 21 29 chr15 102565104 102565244 -929730 - B1_Mur4 SINE Alu 0 150 12 1 1367 291 267 13 13 chr15 102566197 102566273 -928701 - PB1D10 SINE Alu -8 109 34 1 1367 204 111 0 0 chr15 102566901 102566937 -928037 + (G)n Simple_repeat Simple_repeat 1 36 0 1 1367 445 312 119 10 chr15 102568217 102568411 -926563 - MIRb SINE MIR -42 226 12 1 1367 24 0 0 0 chr15 102568875 102568899 -926075 + AT_rich Low_complexity Low_complexity 1 24 0 1 1367 258 32 0 0 chr15 102569339 102569370 -925604 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1367 405 0 0 0 chr15 102569511 102569556 -925418 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1367 301 296 28 0 chr15 102571181 102571252 -923722 - L1MEg LINE L1 -4131 1953 1881 1 1367 195 316 29 67 chr15 102572861 102572966 -922008 + MIRc SINE MIR 40 140 -128 1 1367 361 253 139 0 chr15 102574089 102574168 -920806 - ID_B1 SINE B4 -32 192 103 1 1367 201 263 18 0 chr15 102574759 102574816 -920158 + GA-rich Low_complexity Low_complexity 2 59 0 2 1367 672 295 20 20 chr15 102575658 102575855 -919119 - MARNA DNA Mariner -153 433 237 2 1367 261 0 0 0 chr15 102576514 102576543 -918431 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1367 34 42 0 0 chr15 102577502 102577550 -917424 + GC_rich Low_complexity Low_complexity 1 48 0 2 1367 612 195 77 15 chr15 102578559 102578689 -916285 + B1_Mur1 SINE Alu 12 149 0 2 1367 243 55 89 18 chr15 102578689 102578745 -916229 + A-rich Low_complexity Low_complexity 1 60 0 2 1367 410 19 37 0 chr15 102579381 102579435 -915539 + (TATG)n Simple_repeat Simple_repeat 4 59 0 2 1367 872 298 9 64 chr15 102579893 102580007 -914967 - ID_B1 SINE B4 -1 223 124 2 1367 1699 122 102 63 chr15 102580007 102580029 -914945 - RMER17C LTR ERVK 0 410 378 2 1367 288 0 0 0 chr15 102580029 102580061 -914913 + (GA)n Simple_repeat Simple_repeat 1 32 0 2 1367 1699 122 102 63 chr15 102580061 102580411 -914563 - RMER17C LTR ERVK -33 377 23 2 1367 432 0 0 0 chr15 102580411 102580459 -914515 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1367 1699 122 102 63 chr15 102580459 102580479 -914495 - RMER17C LTR ERVK -388 22 3 2 1367 872 298 9 64 chr15 102580479 102580597 -914377 - ID_B1 SINE B4 -101 123 4 2 1367 281 323 36 29 chr15 102580892 102581029 -913945 + MIRb SINE MIR 74 211 -57 2 1367 251 28 28 0 chr15 102581480 102581516 -913458 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2 1367 558 171 37 19 chr15 102581519 102581626 -913348 - B1F SINE Alu -6 143 35 2 1367 333 0 0 0 chr15 102581796 102581833 -913141 - HAL1-3A_ME LINE L1 -846 2012 1976 2 1367 802 146 18 13 chr15 102581834 102582067 -912907 + (TG)n Simple_repeat Simple_repeat 1 234 0 2 1367 231 280 12 47 chr15 102582082 102582168 -912806 - L3b LINE CR1 -176 306 224 2 1367 273 261 83 42 chr15 102583031 102583151 -911823 - MIR3 SINE MIR -2 206 82 2 1367 705 146 38 8 chr15 102584378 102584509 -910465 - B1_Mur2 SINE Alu -1 148 14 2 1367 414 251 11 81 chr15 102584509 102584564 -910410 - ID_B1 SINE B4 -1 223 51 2 1367 458 168 0 29 chr15 102584592 102584696 -910278 + (TA)n Simple_repeat Simple_repeat 1 101 0 2 1367 951 240 19 24 chr15 102587365 102587578 -907396 + B3 SINE B2 5 216 0 2 1367 522 68 34 0 chr15 102588064 102588152 -906822 + (TA)n Simple_repeat Simple_repeat 2 92 0 2 1367 608 225 116 18 chr15 102588202 102588404 -906570 - B3A SINE B2 -1 215 1 2 1367 2222 87 18 45 chr15 102589030 102589366 -905608 - ORR1A2 LTR MaLR 0 327 1 2 1367 288 0 0 0 chr15 102589778 102589810 -905164 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 1367 383 277 9 38 chr15 102589815 102589920 -905054 + ID_B1 SINE B4 102 203 -21 2 1367 224 236 200 0 chr15 102589928 102589983 -904991 + ID4_ SINE ID 7 72 -11 2 1367 718 161 0 17 chr15 102590930 102591050 -903924 - PB1D9 SINE Alu 0 120 3 2 1367 24 0 0 0 chr15 102591143 102591167 -903807 + AT_rich Low_complexity Low_complexity 1 24 0 2 1367 206 229 0 20 chr15 102592056 102592105 -902869 + CT-rich Low_complexity Low_complexity 1 48 0 2 1367 357 43 0 0 chr15 102592283 102592330 -902644 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1367 387 0 0 0 chr15 102592669 102592712 -902262 + (T)n Simple_repeat Simple_repeat 1 43 0 2 1367 270 0 0 0 chr15 102592797 102592827 -902147 + (TC)n Simple_repeat Simple_repeat 2 31 0 2 1367 242 241 0 0 chr15 102594039 102594093 -900881 + T-rich Low_complexity Low_complexity 1 54 0 2 1367 620 177 153 0 chr15 102594094 102594218 -900756 - ID_B1 SINE B4 -1 223 81 2 1367 1675 27 0 0 chr15 102594465 102594652 -900322 - B2_Mm1t SINE B2 -5 188 2 2 1367 655 243 33 13 chr15 102594676 102594826 -900148 - ID_B1 SINE B4 0 224 72 2 1367 577 311 167 16 chr15 102594865 102595110 -899864 + B4A SINE B4 1 282 -10 2 1367 386 321 19 0 chr15 102595156 102595262 -899712 + PB1D10 SINE Alu 1 108 -9 2 1367 858 167 0 0 chr15 102595268 102595424 -899550 + GA-rich Low_complexity Low_complexity 2 157 0 2 1367 764 100 8 0 chr15 102595553 102595673 -899301 + (GAA)n Simple_repeat Simple_repeat 1 121 0 2 1367 261 0 0 0 chr15 102595673 102595702 -899272 + (CAG)n Simple_repeat Simple_repeat 1 29 0 2 1367 213 132 0 0 chr15 102596279 102596317 -898657 + (CCCCCA)n Simple_repeat Simple_repeat 1 38 0 2 1367 274 302 71 54 chr15 102596576 102596744 -898230 - L1MC4 LINE L1 -400 7642 7472 2 1367 545 258 25 19 chr15 102598354 102598516 -896458 + L1MB3 LINE L1 5445 5607 -576 2 1367 910 146 14 0 chr15 102598518 102598662 -896312 + B1_Mus2 SINE Alu 2 147 0 2 1367 1038 47 0 0 chr15 102598681 102598808 -896166 + B1_Mus1 SINE Alu 1 127 -21 2 1367 678 275 199 10 chr15 102598810 102599221 -895753 + L1MB3 LINE L1 5593 6081 -102 2 1367 764 152 19 99 chr15 102599488 102599649 -895325 - B1_Mur1 SINE Alu -1 148 1 2 1367 401 275 22 0 chr15 102599649 102599740 -895234 - PB1D10 SINE Alu -24 93 1 2 1367 275 315 91 91 chr15 102599740 102599766 -895208 - B4A SINE B4 -206 86 72 2 1367 462 49 0 0 chr15 102599766 102599827 -895147 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1367 275 315 91 91 chr15 102599827 102599886 -895088 - B4A SINE B4 -221 71 1 2 1367 330 342 145 21 chr15 102599889 102600131 -894843 + L2a LINE L2 3155 3426 0 2 1367 771 109 14 14 chr15 102600249 102600388 -894586 + (TTCC)n Simple_repeat Simple_repeat 3 141 0 2 1367 731 283 26 16 chr15 102600454 102600644 -894330 - B3A SINE B2 -5 193 2 2 1367 276 325 50 0 chr15 102600674 102600754 -894220 - B1F SINE Alu -32 117 34 2 1367 690 182 47 8 chr15 102602834 102602961 -892013 - B1_Mur1 SINE Alu -1 148 17 2 1367 191 194 0 0 chr15 102602979 102603015 -891959 - L2 LINE L2 -527 2892 2857 2 1367 288 0 0 0 chr15 102603067 102603099 -891875 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1367 854 267 11 6 chr15 102603165 102603346 -891628 + B3A SINE B2 1 182 -16 2 1367 246 174 0 0 chr15 102603346 102603392 -891582 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1367 435 299 99 94 chr15 102603411 102603644 -891330 + B4 SINE B4 43 276 -16 2 1367 1309 57 74 0 chr15 102604082 102604258 -890716 - B2_Mm2 SINE B2 -5 190 2 2 1367 441 0 0 0 chr15 102604295 102604344 -890630 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 2 1367 444 165 0 265 chr15 102604365 102604497 -890477 + B1_Mur3 SINE Alu 2 98 -51 2 1367 261 0 0 0 chr15 102604507 102604536 -890438 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1367 555 252 10 0 chr15 102604536 102604639 -890335 - RSINE1 SINE B4 -61 104 1 2 1367 786 236 0 0 chr15 102604687 102604835 -890139 + B3 SINE B2 65 212 -4 2 1367 193 97 32 0 chr15 102605321 102605352 -889622 - L2a LINE L2 -3 3423 3392 2 1367 205 251 127 33 chr15 102605346 102605483 -889491 - L2b LINE L2 -83 3304 3156 2 1367 709 259 14 0 chr15 102605760 102605899 -889075 + B1_Mur1 SINE Alu 2 142 -7 2 1367 874 249 43 11 chr15 102605944 102606131 -888843 - B3A SINE B2 -5 193 1 2 1367 530 286 21 14 chr15 102606194 102606336 -888638 - B1F1 SINE Alu -5 144 2 2 1367 252 59 0 0 chr15 102606363 102606397 -888577 + (TAA)n Simple_repeat Simple_repeat 2 35 0 2 1367 292 152 0 29 chr15 102606487 102606555 -888419 + CT-rich Low_complexity Low_complexity 3 68 0 2 1367 230 305 96 12 chr15 102606561 102606587 -888387 - BC1_Mm scRNA scRNA -62 90 1 2 1367 271 246 35 0 chr15 102606587 102606644 -888330 - ID SINE ID -165 59 1 2 1367 340 350 43 28 chr15 102608546 102608687 -886287 + MIR3 SINE MIR 32 174 -34 2 1367 228 333 10 40 chr15 102609083 102609183 -885791 - LTR79 LTR ERVL -208 319 223 2 1367 440 233 60 37 chr15 102609335 102609346 -885628 + B1F SINE Alu 13 138 -11 2 1367 547 211 9 37 chr15 102609346 102609454 -885520 + ID_B1 SINE B4 109 213 -11 2 1367 313 22 21 21 chr15 102609454 102609501 -885473 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 1367 440 233 60 37 chr15 102609501 102609515 -885459 + B1F SINE Alu 139 148 -1 2 1367 300 265 56 47 chr15 102609515 102609622 -885352 - MER5A DNA MER1_type -49 140 33 2 1367 200 282 118 28 chr15 102609773 102609879 -885095 + L2b LINE L2 3251 3417 -9 2 1367 530 323 6 6 chr15 102611059 102611221 -883753 + MER5A1 DNA MER1_type 1 162 -4 2 1367 842 301 61 30 chr15 102612166 102612430 -882544 + B4A SINE B4 19 290 -2 2 1367 1381 60 32 5 chr15 102612461 102612646 -882328 - B2_Mm2 SINE B2 -5 190 1 2 1367 223 167 0 0 chr15 102612646 102612688 -882286 + A-rich Low_complexity Low_complexity 5 46 0 2 1367 327 303 45 27 chr15 102612699 102612811 -882163 + PB1D10 SINE Alu 3 116 -1 2 1367 369 0 0 0 chr15 102615078 102615119 -879855 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2 1367 313 103 14 14 chr15 102616920 102616989 -877985 + (TC)n Simple_repeat Simple_repeat 2 70 0 2 1367 225 0 0 0 chr15 102617605 102617630 -877344 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 1367 494 304 181 8 chr15 102617633 102617882 -877092 - B4 SINE B4 0 292 1 2 1367 764 194 0 0 chr15 102618126 102618260 -876714 - B1_Mur2 SINE Alu -14 135 2 2 1367 455 0 0 18 chr15 102618260 102618316 -876658 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 2 1367 488 59 15 0 chr15 102618325 102618393 -876581 + (CA)n Simple_repeat Simple_repeat 2 70 0 2 1367 180 0 0 0 chr15 102619780 102619800 -875174 + (TG)n Simple_repeat Simple_repeat 2 21 0 2 1367 209 273 0 0 chr15 102621585 102621640 -873334 - L2c LINE L2 -226 3161 3107 2 1367 249 108 0 0 chr15 102622680 102622717 -872257 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1367 451 252 191 0 chr15 102622996 102623127 -871847 - RSINE1 SINE B4 -8 157 2 2 1367 345 208 0 0 chr15 102623383 102623460 -871514 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 1367 181 0 0 65 chr15 102623575 102623606 -871368 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1367 1743 193 60 35 chr15 102623606 102623997 -870977 + MTD LTR MaLR 18 418 -1 3 1367 284 309 0 0 chr15 102624133 102624217 -870757 + PB1D9 SINE Alu 37 120 0 3 1367 406 276 43 8 chr15 102624228 102624345 -870629 + B1F2 SINE Alu 9 129 -20 3 1367 217 161 17 35 chr15 102624693 102624751 -870223 + T-rich Low_complexity Low_complexity 2 58 0 3 1367 780 197 7 7 chr15 102625913 102626061 -868913 - B1_Mur1 SINE Alu 0 149 2 3 1367 234 0 0 0 chr15 102627402 102627428 -867546 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 1367 646 202 122 39 chr15 102628318 102628498 -866476 - ID_B1 SINE B4 0 224 30 3 1368 453 36 0 0 chr15 102629673 102629728 -865246 + (TTCC)n Simple_repeat Simple_repeat 4 58 0 3 1368 627 278 19 0 chr15 102629875 102630037 -864937 + RSINE1 SINE B4 1 165 0 3 1368 224 255 0 0 chr15 102630044 102630095 -864879 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 1368 595 235 35 0 chr15 102631026 102631141 -863833 - ID_B1 SINE B4 -105 119 1 3 1368 290 285 218 0 chr15 102631658 102631823 -863151 - L1MB3 LINE L1 -9 6174 5974 3 1368 706 247 12 6 chr15 102632266 102632429 -862545 + MER5A1 DNA MER1_type 1 164 -2 3 1368 183 129 0 0 chr15 102633074 102633105 -861869 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1368 296 24 24 0 chr15 102634721 102634762 -860212 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1368 331 241 12 60 chr15 102634764 102634848 -860126 - B4 SINE B4 -23 269 190 3 1368 414 0 0 0 chr15 102634851 102634897 -860077 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1368 438 176 64 54 chr15 102634926 102635130 -859844 - RMER17C LTR ERVK -135 275 70 3 1368 760 268 47 5 chr15 102635135 102635349 -859625 - B4 SINE B4 -69 223 1 3 1368 509 214 213 12 chr15 102635565 102635758 -859216 + MIRb SINE MIR 12 245 -23 3 1368 726 253 45 94 chr15 102639238 102639418 -855556 + B3A SINE B2 2 183 -15 3 1368 339 65 0 0 chr15 102639418 102639464 -855510 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1368 468 253 45 94 chr15 102639464 102639484 -855490 + B2_Mm2 SINE B2 172 192 -3 3 1368 1213 35 7 0 chr15 102641213 102641356 -853618 + B1_Mm SINE Alu 1 144 -3 3 1368 220 0 86 0 chr15 102641356 102641391 -853583 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 3 1368 659 177 0 26 chr15 102642580 102642696 -852278 - B1_Mur1 SINE Alu -2 147 35 3 1368 943 266 22 30 chr15 102643473 102643744 -851230 + B4A SINE B4 1 269 -23 3 1368 180 217 0 0 chr15 102643744 102643790 -851184 + (CG)n Simple_repeat Simple_repeat 2 47 0 3 1368 231 114 0 0 chr15 102643824 102643859 -851115 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1368 353 160 0 39 chr15 102643899 102643977 -850997 + HAL1-3A_ME LINE L1 1975 2049 -809 3 1368 815 260 0 50 chr15 102643999 102644201 -850773 + B3A SINE B2 1 192 -6 3 1368 876 46 0 0 chr15 102645526 102645635 -849339 + (TCC)n Simple_repeat Simple_repeat 1 109 0 3 1368 218 321 106 47 chr15 102646116 102646286 -848688 - L2c LINE L2 -12 3375 3196 3 1368 21 0 0 0 chr15 102647111 102647132 -847842 + AT_rich Low_complexity Low_complexity 1 21 0 3 1368 553 176 97 22 chr15 102647133 102647267 -847707 - B1F2 SINE Alu 0 149 6 3 1368 233 337 0 38 chr15 102647578 102647683 -847291 + RMER12 LTR ERVK 750 850 -472 3 1368 1120 232 92 4 chr15 102647688 102647939 -847035 - B4A SINE B4 -15 277 5 3 1368 22 0 0 0 chr15 102647962 102647984 -846990 + AT_rich Low_complexity Low_complexity 1 22 0 3 1368 965 263 0 0 chr15 102648013 102648218 -846756 - B3 SINE B2 -11 205 1 3 1368 1363 83 10 30 chr15 102648229 102648427 -846547 - B2_Mm2 SINE B2 -1 194 1 3 1368 387 306 52 0 chr15 102648567 102648701 -846273 + B1F SINE Alu 1 141 -8 3 1368 237 208 0 0 chr15 102649439 102649487 -845487 - L2a LINE L2 0 3426 3379 3 1368 235 320 41 0 chr15 102649927 102650024 -844950 + MER103 DNA DNA 65 165 -1 3 1368 503 207 54 60 chr15 102650045 102650194 -844780 + B1_Mur3 SINE Alu 1 148 -1 3 1368 245 300 167 15 chr15 102650255 102650387 -844587 + MIR3 SINE MIR 35 186 -22 3 1368 378 0 0 0 chr15 102651045 102651087 -843887 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1368 187 329 23 12 chr15 102652538 102652624 -842350 - MIRm SINE MIR 0 276 190 3 1368 257 219 62 0 chr15 102652947 102653011 -841963 - MIR SINE MIR -37 225 158 3 1368 417 240 48 9 chr15 102653055 102653160 -841814 + PB1D10 SINE Alu 1 109 -8 3 1368 215 103 26 0 chr15 102653292 102653331 -841643 + (CTA)n Simple_repeat Simple_repeat 2 41 0 3 1368 490 282 32 0 chr15 102653366 102653490 -841484 + RSINE1 SINE B4 3 130 -35 3 1368 243 0 0 0 chr15 102653609 102653636 -841338 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1368 921 42 0 0 chr15 102653636 102653755 -841219 - B1_Mm SINE Alu 0 147 29 3 1368 587 193 26 65 chr15 102653892 102654033 -840941 + B1_Mur3 SINE Alu 1 137 -12 3 1368 432 0 0 0 chr15 102654033 102654081 -840893 + (CATAA)n Simple_repeat Simple_repeat 5 52 0 3 1368 587 193 26 65 chr15 102654081 102654094 -840880 + B1_Mur3 SINE Alu 138 148 -1 3 1368 352 295 11 0 chr15 102655075 102655170 -839804 - MIR SINE MIR -93 169 74 3 1368 252 229 16 0 chr15 102655191 102655252 -839722 - MER5A1 DNA MER1_type 0 166 105 3 1368 351 0 0 0 chr15 102655281 102655320 -839654 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1368 271 265 0 0 chr15 102655321 102655389 -839585 - ID2 SINE ID -11 72 5 3 1368 351 0 0 0 chr15 102655424 102655463 -839511 + (TCTG)n Simple_repeat Simple_repeat 1 39 0 3 1368 213 279 0 62 chr15 102656573 102656638 -838336 - B1F1 SINE Alu -21 128 68 3 1368 308 250 122 20 chr15 102656899 102656997 -837977 + MLT1A LTR MaLR 263 370 -4 3 1368 319 331 96 34 chr15 102657229 102657407 -837567 + MER58C DNA MER1_type 27 215 0 3 1368 441 277 36 0 chr15 102657598 102657710 -837264 + PB1D10 SINE Alu 2 117 0 3 1368 218 95 24 0 chr15 102658189 102658231 -836743 + (TTTTTG)n Simple_repeat Simple_repeat 2 44 0 3 1368 8228 123 51 11 chr15 102658360 102659602 -835372 - L1_Mur2 LINE L1 -2254 3623 2328 3 1368 189 0 0 0 chr15 102659602 102659623 -835351 + (TTG)n Simple_repeat Simple_repeat 1 21 0 3 1368 8228 123 51 11 chr15 102659623 102659749 -835225 - L1_Mur2 LINE L1 -3550 2327 2201 3 1368 258 185 115 42 chr15 102659876 102659972 -835002 + MER53 DNA hAT 1 103 -90 3 1368 936 208 9 92 chr15 102661721 102661949 -833025 + ID_B1 SINE B4 3 211 -13 3 1368 216 0 0 0 chr15 102661951 102661975 -832999 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 1368 480 315 117 28 chr15 102662265 102662898 -832076 - L1ME3B LINE L1 -133 6107 5420 3 1368 329 327 62 12 chr15 102663799 102663960 -831014 + L2b LINE L2 3207 3375 0 3 1368 265 323 19 39 chr15 102665388 102665491 -829483 + RSINE1 SINE B4 64 164 -1 3 1368 324 0 0 0 chr15 102665675 102665711 -829263 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1368 22 0 0 0 chr15 102665982 102666004 -828970 + AT_rich Low_complexity Low_complexity 1 22 0 3 1368 433 315 100 63 chr15 102666004 102666194 -828780 - B3A SINE B2 -1 197 1 3 1368 486 305 39 19 chr15 102666249 102666403 -828571 - ID_B1 SINE B4 -2 222 66 3 1368 618 312 138 10 chr15 102666928 102667239 -827735 - ORR1E LTR MaLR -5 354 4 3 1368 279 0 0 0 chr15 102669282 102669313 -825661 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1368 333 0 0 0 chr15 102669313 102669349 -825625 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 1368 21 0 0 0 chr15 102671387 102671408 -823566 + AT_rich Low_complexity Low_complexity 1 21 0 3 1368 1654 192 55 43 chr15 102672550 102672951 -822023 - MTD LTR MaLR -14 405 8 3 1368 845 241 82 33 chr15 102673273 102673543 -821431 + B4A SINE B4 1 283 -9 3 1368 369 0 0 0 chr15 102673544 102673585 -821389 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1368 442 242 123 12 chr15 102674482 102674645 -820329 + MIRb SINE MIR 31 211 -57 3 1368 369 0 0 0 chr15 102675283 102675324 -819650 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1368 23 0 0 0 chr15 102676365 102676388 -818586 + AT_rich Low_complexity Low_complexity 1 23 0 3 1368 486 125 0 0 chr15 102676590 102676670 -818304 + (TG)n Simple_repeat Simple_repeat 2 81 0 3 1368 185 368 72 24 chr15 102676864 102677031 -817943 + MER5B DNA MER1_type 4 178 0 3 1368 253 204 80 0 chr15 102679448 102679536 -815438 + MIRc SINE MIR 14 108 -160 3 1368 234 81 0 0 chr15 102679781 102679818 -815156 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 3 1368 462 250 40 0 chr15 102679860 102679984 -814990 + B1F SINE Alu 21 149 0 3 1368 274 309 12 0 chr15 102680623 102680704 -814270 - MER82 DNA MER2_type -2 651 570 3 1368 1096 170 10 29 chr15 102680758 102680964 -814010 - B3 SINE B2 -11 205 4 3 1368 482 295 16 0 chr15 102681001 102681123 -813851 + ID_B1 SINE B4 96 219 -5 3 1368 421 270 17 97 chr15 102681147 102681441 -813533 + L1MA6 LINE L1 5911 6168 -132 3 1368 392 235 12 12 chr15 102681441 102681523 -813451 + ID4_ SINE ID 1 82 -1 3 1368 306 0 0 0 chr15 102681529 102681563 -813411 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 1368 421 277 21 134 chr15 102681563 102681701 -813273 + L1MA6 LINE L1 6172 6299 -1 3 1368 478 289 40 176 chr15 102682743 102682868 -812106 + L1MB8 LINE L1 4391 4520 -1626 3 1368 570 232 220 0 chr15 102682868 102683036 -811938 + B3 SINE B2 3 207 -9 3 1368 478 289 40 176 chr15 102683036 102683632 -811342 + L1MB8 LINE L1 4521 5014 -1132 3 1368 1039 278 55 4 chr15 102683784 102684058 -810916 + B4A SINE B4 1 288 -4 4 1368 857 278 250 29 chr15 102684097 102684705 -810269 + L1MB8 LINE L1 5433 6175 -3 3 1368 510 243 0 9 chr15 102685456 102685564 -809410 + RSINE1 SINE B4 2 108 -57 4 1368 180 339 15 0 chr15 102688213 102688278 -806696 + L2c LINE L2 3015 3080 -307 4 1368 3031 69 0 2 chr15 102690117 102690510 -804464 - L1Md_F2 LINE L1 0 6582 6191 4 1368 270 323 12 42 chr15 102691239 102691334 -803640 + B4A SINE B4 1 93 -72 4 1368 254 256 39 118 chr15 102691398 102691500 -803474 + MT2B LTR ERVL 147 240 -361 4 1368 470 206 97 10 chr15 102691422 102691525 -803449 + PB1D9 SINE Alu 9 120 0 4 1368 685 234 83 0 chr15 102691547 102691692 -803282 + RSINE1 SINE B4 5 161 -4 4 1368 360 0 0 0 chr15 102691773 102691813 -803161 + (GA)n Simple_repeat Simple_repeat 1 40 0 4 1368 773 177 49 14 chr15 102691909 102692052 -802922 - B1_Mur3 SINE Alu -1 148 1 4 1368 25 0 0 0 chr15 102694416 102694441 -800533 + AT_rich Low_complexity Low_complexity 1 25 0 4 1368 623 191 0 6 chr15 102695013 102695176 -799798 + (TG)n Simple_repeat Simple_repeat 1 162 0 4 1368 537 319 0 0 chr15 102695398 102695533 -799441 - RSINE1 SINE B4 -6 159 25 4 1368 805 162 37 0 chr15 102695537 102695673 -799301 + B1_Mur4 SINE Alu 5 145 -5 4 1368 293 300 53 35 chr15 102695723 102695837 -799137 + Kanga2_a DNA Tc2 1 116 -772 4 1368 377 230 40 3 chr15 102695989 102696085 -798889 + L1MEd LINE L1 160 245 -5980 4 1368 581 261 157 8 chr15 102696728 102697010 -797964 + L1MEd LINE L1 968 1321 -4904 4 1368 391 271 79 137 chr15 102697473 102697632 -797342 + L1ME1 LINE L1 1101 1267 -5133 4 1368 866 143 0 104 chr15 102697632 102697796 -797178 + B1_Mus1 SINE Alu 2 148 0 4 1368 391 271 79 137 chr15 102697796 102697978 -796996 + L1ME1 LINE L1 1268 1422 -4978 4 1368 296 292 14 49 chr15 102698044 102698188 -796786 + L1ME1 LINE L1 1653 1791 -4548 4 1368 714 301 82 4 chr15 102698266 102698533 -796441 + B4A SINE B4 1 288 -4 4 1368 351 299 93 8 chr15 102698591 102698837 -796137 + L1ME1 LINE L1 1846 2112 -4288 4 1368 311 252 247 15 chr15 102698946 102699149 -795825 + L1ME1 LINE L1 2252 2503 -3816 4 1368 26 30 0 0 chr15 102699195 102699228 -795746 + AT_rich Low_complexity Low_complexity 1 33 0 4 1368 203 170 0 21 chr15 102699231 102699279 -795695 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1368 667 269 60 0 chr15 102699284 102699433 -795541 - RSINE1 SINE B4 -4 161 4 4 1368 1125 309 82 27 chr15 102699438 102700174 -794800 + L1ME1 LINE L1 2566 3341 -2978 4 1368 886 236 23 5 chr15 102700292 102700509 -794465 + ID_B1 SINE B4 3 223 -1 4 1368 3015 63 0 0 chr15 102700568 102700967 -794007 - MTB_Mm LTR MaLR -8 399 1 4 1368 315 243 47 28 chr15 102700974 102701080 -793894 + L1ME1 LINE L1 3460 3567 -2752 4 1368 529 237 0 12 chr15 102701282 102701453 -793521 + GA-rich Low_complexity Low_complexity 4 172 0 4 1368 694 293 116 19 chr15 102701476 102701838 -793136 + L1ME1 LINE L1 5629 6025 -327 4 1368 228 35 0 0 chr15 102701899 102701928 -793046 + (TC)n Simple_repeat Simple_repeat 2 30 0 4 1368 295 374 9 0 chr15 102702029 102702136 -792838 + LTR16D2 LTR ERVL 465 572 0 4 1368 832 283 35 4 chr15 102702326 102702549 -792425 + B4A SINE B4 1 230 -62 4 1368 707 122 26 0 chr15 102702549 102702664 -792310 + B3A SINE B2 2 119 -79 4 1368 21 0 0 0 chr15 102702708 102702729 -792245 + AT_rich Low_complexity Low_complexity 1 21 0 4 1368 306 0 0 0 chr15 102702777 102702811 -792163 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1368 186 103 0 0 chr15 102703208 102703237 -791737 + (GA)n Simple_repeat Simple_repeat 1 29 0 4 1368 2240 119 50 19 chr15 102703524 102703900 -791074 - MTC LTR MaLR 0 421 34 4 1368 1917 128 38 89 chr15 102704296 102704689 -790285 - ORR1C1 LTR MaLR -5 373 1 4 1368 998 251 0 5 chr15 102704932 102705148 -789826 + B3 SINE B2 2 216 0 4 1368 233 0 62 0 chr15 102706328 102706360 -788614 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1368 875 125 0 42 chr15 102706360 102706502 -788472 - B1_Mur4 SINE Alu -9 141 6 4 1368 236 352 27 40 chr15 102706526 102706635 -788339 - L2a LINE L2 -18 3408 3302 4 1368 852 167 14 14 chr15 102706635 102706781 -788193 + B1_Mur4 SINE Alu 5 150 0 4 1368 236 352 27 40 chr15 102706781 102706819 -788155 - L2a LINE L2 -125 3301 3263 4 1368 351 0 0 0 chr15 102707234 102707273 -787701 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1368 260 247 103 13 chr15 102707278 102707356 -787618 - B4A SINE B4 -74 218 134 4 1368 591 197 0 0 chr15 102708317 102708495 -786479 + (CA)n Simple_repeat Simple_repeat 2 179 0 4 1368 405 0 0 0 chr15 102709158 102709203 -785771 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1368 435 38 0 0 chr15 102709392 102709445 -785529 + (TC)n Simple_repeat Simple_repeat 1 53 0 4 1368 460 179 13 0 chr15 102710053 102710131 -784843 + ID4_ SINE ID 4 82 -1 4 1368 619 189 114 0 chr15 102710741 102710873 -784101 + B1_Mus2 SINE Alu 1 147 0 4 1368 706 257 36 36 chr15 102711813 102712007 -782967 + ID_B1 SINE B4 30 223 -1 4 1368 766 197 223 21 chr15 102712314 102712547 -782427 + B4 SINE B4 1 280 -12 4 1368 224 212 0 15 chr15 102712564 102712631 -782343 + (CATA)n Simple_repeat Simple_repeat 2 67 0 4 1368 793 294 83 40 chr15 102712642 102712918 -782056 + B4 SINE B4 1 288 -4 4 1368 374 259 70 26 chr15 102713341 102713456 -781518 + PB1D9 SINE Alu 1 120 0 4 1368 189 0 0 0 chr15 102713722 102713743 -781231 + (TTG)n Simple_repeat Simple_repeat 1 21 0 4 1368 1037 101 14 0 chr15 102714456 102714595 -780379 + B1_Mus1 SINE Alu 2 142 -6 4 1368 372 94 0 0 chr15 102714595 102714648 -780326 + (GA)n Simple_repeat Simple_repeat 1 53 0 4 1368 261 0 0 0 chr15 102714715 102714744 -780230 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 1368 1190 62 0 0 chr15 102714744 102714889 -780085 - B1_Mus1 SINE Alu -3 145 1 4 1368 1521 191 102 67 chr15 102716178 102716506 -778468 - MTD LTR MaLR -2 417 63 4 1368 691 160 249 0 chr15 102716506 102716675 -778299 + B3 SINE B2 2 212 -4 4 1368 1521 191 102 67 chr15 102716675 102716749 -778225 - MTD LTR MaLR -357 62 1 4 1368 184 209 116 0 chr15 102716890 102716933 -778041 + MIRc SINE MIR 97 144 -124 4 1368 798 145 8 0 chr15 102716933 102717057 -777917 + Lx2B LINE L1 6353 6477 -523 4 1368 754 91 0 24 chr15 102717058 102717182 -777792 - Lx LINE L1 0 6654 6534 4 1368 3061 89 59 0 chr15 102717183 102717749 -777225 - Lx LINE L1 -653 6001 5408 4 1368 2456 179 55 66 chr15 102717749 102718293 -776681 + Lx2B LINE L1 6463 7000 0 4 1368 235 315 34 0 chr15 102718302 102718391 -776583 + MIRb SINE MIR 154 245 -23 4 1368 199 362 42 35 chr15 102718747 102718890 -776084 - MIRc SINE MIR -107 161 18 4 1368 822 242 0 0 chr15 102719387 102719548 -775426 + RSINE1 SINE B4 4 164 -1 4 1368 515 65 30 82 chr15 102719559 102719693 -775281 + (TCTCTG)n Simple_repeat Simple_repeat 4 130 0 4 1368 195 42 0 0 chr15 102719693 102719717 -775257 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1368 333 0 0 0 chr15 102720530 102720567 -774407 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1368 331 244 278 0 chr15 102720778 102720868 -774106 + L1MB2 LINE L1 4055 4169 -1977 4 1368 423 248 22 38 chr15 102720860 102721013 -773961 + L1MB2 LINE L1 4834 4990 -1156 4 1368 251 300 110 0 chr15 102721015 102721115 -773859 + PB1D10 SINE Alu 1 111 -6 4 1368 259 247 37 49 chr15 102721188 102721269 -773705 + ID4 SINE ID 3 82 -1 4 1368 395 342 49 52 chr15 102721302 102721629 -773345 + L1MB2 LINE L1 4999 5324 -816 4 1368 699 104 0 0 chr15 102721629 102721735 -773239 + B2_Mm2 SINE B2 1 106 -89 4 1368 360 59 0 0 chr15 102721735 102721786 -773188 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 4 1368 361 183 226 0 chr15 102722002 102722095 -772879 + B3A SINE B2 10 123 -75 4 1368 1104 263 130 64 chr15 102722177 102722299 -772675 + L1MB2 LINE L1 5492 5607 -564 4 1368 332 224 15 0 chr15 102722299 102722366 -772608 + ID4_ SINE ID 4 71 -12 4 1368 1064 265 131 65 chr15 102722366 102722852 -772122 + L1MB2 LINE L1 5608 6140 -31 4 1368 356 284 0 0 chr15 102723657 102723738 -771236 - B4A SINE B4 -87 205 125 4 1368 333 231 0 0 chr15 102723761 102723826 -771148 - B4A SINE B4 -224 68 4 4 1368 234 0 0 0 chr15 102723851 102723877 -771097 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1368 851 246 74 42 chr15 102723920 102723960 -771014 + ID SINE ID 2 40 -184 4 1368 825 214 237 90 chr15 102723960 102724315 -770659 + MTB_Mm LTR MaLR 1 407 0 4 1368 851 246 74 42 chr15 102724315 102724490 -770484 + ID_B1 SINE B4 41 224 0 4 1368 288 0 0 0 chr15 102725016 102725048 -769926 + (TTA)n Simple_repeat Simple_repeat 2 33 0 4 1368 595 284 7 60 chr15 102725049 102725199 -769775 - RSINE1 SINE B4 0 165 24 4 1368 609 253 148 0 chr15 102725840 102726022 -768952 - B3 SINE B2 -7 209 1 4 1368 237 246 45 30 chr15 102726728 102726795 -768179 + MADE2 DNA Mariner 7 74 -6 4 1368 260 330 107 0 chr15 102726810 102726922 -768052 + BC1_Mm scRNA scRNA 2 125 -27 4 1368 382 355 28 7 chr15 102727011 102727153 -767821 + MIR SINE MIR 90 234 -28 4 1368 489 248 17 17 chr15 102727392 102727511 -767463 + PB1D9 SINE Alu 1 119 -1 4 1368 885 185 7 0 chr15 102727511 102727656 -767318 + B1_Mur3 SINE Alu 1 147 -2 4 1368 28 0 0 0 chr15 102727817 102727845 -767129 + AT_rich Low_complexity Low_complexity 1 28 0 4 1368 255 31 0 0 chr15 102727930 102727962 -767012 + (TTAG)n Simple_repeat Simple_repeat 1 32 0 4 1368 897 138 13 27 chr15 102727962 102728101 -766873 - B1_Mus1 SINE Alu -7 141 2 4 1368 358 340 99 64 chr15 102728526 102728779 -766195 - L1ME3A LINE L1 -3 6170 5907 4 1368 387 60 0 0 chr15 102728779 102728829 -766145 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 4 1368 358 340 99 64 chr15 102728829 102728858 -766116 - L1ME3A LINE L1 -267 5906 5879 4 1368 218 119 24 0 chr15 102728858 102728900 -766074 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1368 896 133 35 0 chr15 102728900 102729043 -765931 - B1_Mus1 SINE Alu 0 148 1 4 1368 275 275 76 11 chr15 102729112 102729204 -765770 - B2_Mm1t SINE B2 -94 99 2 4 1368 287 256 60 24 chr15 102729122 102729206 -765768 - RSINE1 SINE B4 -78 87 1 4 1368 195 69 0 0 chr15 102730126 102730155 -764819 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1368 564 274 33 28 chr15 102730233 102730413 -764561 - L1MB3 LINE L1 -2 6181 6001 4 1368 232 246 14 55 chr15 102730448 102730521 -764453 - tRNA-Ala-GCA tRNA tRNA -4 71 2 4 1368 424 231 62 36 chr15 102730833 102730945 -764029 - PB1D9 SINE Alu -1 119 5 4 1368 1106 228 9 13 chr15 102730953 102731184 -763790 - B4 SINE B4 -62 230 1 4 1368 1620 42 0 15 chr15 102731565 102731760 -763214 + B2_Mm1a SINE B2 2 193 0 5 1368 24 0 0 0 chr15 102731781 102731805 -763169 + AT_rich Low_complexity Low_complexity 1 24 0 5 1368 723 121 64 57 chr15 102731828 102731953 -763021 + B1_Mur4 SINE Alu 10 137 -13 5 1368 270 0 0 0 chr15 102731953 102731983 -762991 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 5 1368 723 121 64 57 chr15 102731983 102731997 -762977 + B1_Mur4 SINE Alu 138 150 0 5 1368 401 298 180 12 chr15 102732024 102732279 -762695 - Kanga1 DNA Tc2 -112 1633 1336 5 1368 247 227 116 4 chr15 102732294 102732406 -762568 - Kanga1 DNA Tc2 -1612 133 4 5 1368 781 168 15 0 chr15 102732439 102732570 -762404 + B1_Mus2 SINE Alu 7 139 -8 5 1368 186 71 0 0 chr15 102732582 102732610 -762364 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 5 1368 343 355 68 16 chr15 102732738 102732930 -762044 - L1MEd LINE L1 -5877 242 41 5 1368 366 310 45 37 chr15 102732985 102733119 -761855 - MIRb SINE MIR -115 153 19 5 1368 381 139 75 12 chr15 102733443 102733523 -761451 + Lx LINE L1 6306 6390 -264 5 1368 297 0 0 0 chr15 102733538 102733571 -761403 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 1368 642 89 0 0 chr15 102733999 102734089 -760885 + (GGA)n Simple_repeat Simple_repeat 2 91 0 5 1368 180 0 0 0 chr15 102734162 102734182 -760792 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1368 284 307 0 152 chr15 102734250 102734268 -760706 + MT2B LTR ERVL 153 182 -419 5 1368 488 188 0 12 chr15 102734268 102734354 -760620 + B1_Mur4 SINE Alu 2 86 -64 5 1368 284 307 0 152 chr15 102734354 102734415 -760559 + MT2B LTR ERVL 183 292 -309 5 1368 419 311 19 0 chr15 102734387 102734493 -760481 + PB1D10 SINE Alu 8 115 -2 5 1368 465 338 7 27 chr15 102734494 102734640 -760334 + ID_B1 SINE B4 82 224 0 5 1368 267 351 0 0 chr15 102734654 102734728 -760246 + ID4 SINE ID 8 81 -2 5 1368 378 0 0 0 chr15 102735020 102735062 -759912 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1368 185 0 40 0 chr15 102735090 102735115 -759859 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 1368 393 22 0 0 chr15 102735193 102735239 -759735 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 1368 389 203 14 0 chr15 102736471 102736540 -758434 - B3A SINE B2 -128 70 1 5 1368 880 255 47 19 chr15 102736867 102737079 -757895 + ID_B1 SINE B4 7 224 0 5 1368 1149 111 0 0 chr15 102737079 102737251 -757723 + (GAGAA)n Simple_repeat Simple_repeat 2 173 0 5 1368 225 184 0 0 chr15 102737564 102737602 -757372 + RSINE1 SINE B4 2 39 -126 5 1368 218 179 17 51 chr15 102737602 102737623 -757351 + B3A SINE B2 1 57 -141 5 1368 652 254 51 28 chr15 102738406 102738584 -756390 - B3A SINE B2 -16 182 1 5 1368 806 163 0 0 chr15 102738660 102738783 -756191 - B1_Mus1 SINE Alu 0 148 26 5 1368 383 0 21 0 chr15 102738803 102738850 -756124 + (TATG)n Simple_repeat Simple_repeat 4 51 0 5 1368 444 234 45 45 chr15 102738871 102738983 -755991 - PB1D7 SINE Alu -2 118 7 5 1368 319 368 61 35 chr15 102739053 102739250 -755724 - MLT1J2 LTR MaLR 0 448 247 5 1368 181 0 69 0 chr15 102740949 102740978 -753996 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 5 1368 233 337 12 0 chr15 102741827 102741910 -753064 + (CATA)n Simple_repeat Simple_repeat 4 87 0 5 1368 446 276 57 118 chr15 102741927 102742041 -752933 + MER2 DNA MER2_type 1 107 -238 5 1368 1100 119 0 11 chr15 102742041 102742219 -752755 - L1Md_F2 LINE L1 0 6582 6407 5 1368 446 276 57 118 chr15 102742219 102742350 -752624 + MER2 DNA MER2_type 108 231 -114 5 1368 212 191 24 0 chr15 102742362 102742404 -752570 + (TATG)n Simple_repeat Simple_repeat 2 44 0 5 1368 906 145 0 0 chr15 102745940 102746092 -748882 + (TTTC)n Simple_repeat Simple_repeat 1 152 0 5 1368 408 125 0 0 chr15 102748210 102748274 -746700 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 1368 198 0 0 0 chr15 102749736 102749758 -745216 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 5 1368 261 83 0 0 chr15 102750964 102751000 -743974 + (TTA)n Simple_repeat Simple_repeat 1 36 0 5 1368 215 236 14 0 chr15 102751484 102751556 -743418 + GA-rich Low_complexity Low_complexity 2 74 0 5 1368 233 118 0 19 chr15 102751684 102751736 -743238 + (CGG)n Simple_repeat Simple_repeat 3 53 0 5 1368 23 0 0 0 chr15 102752365 102752388 -742586 + GC_rich Low_complexity Low_complexity 1 23 0 5 1368 455 0 18 0 chr15 102754737 102754792 -740182 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1368 306 0 0 0 chr15 102754792 102754825 -740149 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1368 485 44 0 14 chr15 102754913 102754982 -739992 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 5 1368 23 0 0 0 chr15 102755617 102755640 -739334 + AT_rich Low_complexity Low_complexity 1 23 0 5 1368 190 271 238 19 chr15 102755762 102755881 -739093 + MIRb SINE MIR 37 188 -80 5 1368 180 0 0 0 chr15 102756038 102756058 -738916 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 5 1368 786 190 50 104 chr15 102757163 102757422 -737552 - MER96B DNA hAT -159 258 14 5 1368 304 232 0 28 chr15 102758457 102758528 -736446 - L1MEg LINE L1 -4131 1953 1885 5 1368 214 128 43 0 chr15 102758653 102758700 -736274 + A-rich Low_complexity Low_complexity 6 54 0 5 1368 357 62 0 0 chr15 102759708 102759756 -735218 + (TTGGGG)n Simple_repeat Simple_repeat 6 53 0 5 1369 342 80 0 0 chr15 102761228 102761278 -733696 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1369 216 0 0 0 chr15 102762630 102762654 -732320 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 1369 255 31 0 0 chr15 102764375 102764407 -730567 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 5 1369 279 0 0 0 chr15 102765780 102765811 -729163 + (TC)n Simple_repeat Simple_repeat 2 32 0 5 1369 258 176 0 0 chr15 102765811 102765862 -729112 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1369 288 0 0 0 chr15 102766946 102766978 -727996 + (T)n Simple_repeat Simple_repeat 1 32 0 5 1369 240 111 0 0 chr15 102768408 102768444 -726530 + (TAA)n Simple_repeat Simple_repeat 1 36 0 5 1369 582 15 0 0 chr15 102769100 102769167 -725807 + (CA)n Simple_repeat Simple_repeat 1 67 0 5 1369 504 0 0 0 chr15 102773228 102773284 -721690 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1369 21 0 0 0 chr15 102774782 102774803 -720171 + AT_rich Low_complexity Low_complexity 1 21 0 5 1369 29 0 0 0 chr15 102775308 102775337 -719637 + AT_rich Low_complexity Low_complexity 1 29 0 5 1369 203 256 0 0 chr15 102776533 102776572 -718402 + polypurine Low_complexity Low_complexity 4 42 0 5 1369 486 0 0 0 chr15 102779803 102779857 -715117 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 1369 915 27 0 0 chr15 102780677 102780787 -714187 + (TC)n Simple_repeat Simple_repeat 1 110 0 5 1369 558 0 0 0 chr15 102782133 102782195 -712779 + (GA)n Simple_repeat Simple_repeat 2 63 0 5 1369 239 322 0 22 chr15 102786013 102786102 -708872 + G-rich Low_complexity Low_complexity 2 88 0 5 1369 207 0 0 0 chr15 102787177 102787200 -707774 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 5 1369 639 98 0 0 chr15 102788211 102788303 -706671 + (TGG)n Simple_repeat Simple_repeat 2 93 0 5 1369 249 33 0 0 chr15 102788700 102788730 -706244 + (TCTCC)n Simple_repeat Simple_repeat 2 31 0 5 1369 817 133 6 6 chr15 102789881 102790040 -704934 + (GA)n Simple_repeat Simple_repeat 2 160 0 5 1369 636 59 0 0 chr15 102791623 102791708 -703266 + (TC)n Simple_repeat Simple_repeat 2 86 0 5 1369 318 26 0 0 chr15 102791708 102791746 -703228 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1369 204 97 0 0 chr15 102791753 102791784 -703190 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 5 1369 234 128 0 0 chr15 102791777 102791816 -703158 + (TCCC)n Simple_repeat Simple_repeat 2 40 0 5 1369 189 107 0 0 chr15 102792564 102792592 -702382 + (GAA)n Simple_repeat Simple_repeat 3 30 0 5 1369 345 309 14 49 chr15 102792683 102792826 -702148 + L1MC LINE L1 3073 3210 -2936 5 1369 190 51 24 49 chr15 102794103 102794144 -700830 + (CAAAAA)n Simple_repeat Simple_repeat 4 43 0 5 1369 214 250 0 19 chr15 102797167 102797220 -697754 + C-rich Low_complexity Low_complexity 3 54 0 5 1369 985 51 0 14 chr15 102798731 102798869 -696105 + (TTC)n Simple_repeat Simple_repeat 3 138 0 5 1369 214 175 0 24 chr15 102801517 102801558 -693416 + C-rich Low_complexity Low_complexity 2 41 0 5 1369 351 0 0 0 chr15 102805074 102805113 -689861 + (TC)n Simple_repeat Simple_repeat 2 40 0 5 1369 540 0 0 0 chr15 102805113 102805172 -689802 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 1369 228 182 0 0 chr15 102806683 102806727 -688247 + T-rich Low_complexity Low_complexity 1 44 0 5 1369 275 67 0 43 chr15 102806792 102806839 -688135 + (GGGA)n Simple_repeat Simple_repeat 3 47 0 5 1369 208 312 0 13 chr15 102807928 102808006 -686968 + G-rich Low_complexity Low_complexity 6 82 0 5 1369 240 302 0 36 chr15 102809532 102809642 -685332 + CT-rich Low_complexity Low_complexity 1 106 0 5 1369 414 0 0 0 chr15 102810061 102810107 -684867 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1369 244 265 15 0 chr15 102811342 102811410 -683564 + CT-rich Low_complexity Low_complexity 3 71 0 5 1369 192 40 0 0 chr15 102811410 102811435 -683539 + (CTG)n Simple_repeat Simple_repeat 1 25 0 5 1369 200 59 0 105 chr15 102812909 102812947 -682027 + T-rich Low_complexity Low_complexity 2 35 0 5 1369 576 0 0 0 chr15 102813348 102813412 -681562 + (GA)n Simple_repeat Simple_repeat 1 64 0 5 1369 206 186 0 44 chr15 102813919 102813964 -681010 + G-rich Low_complexity Low_complexity 1 43 0 5 1369 225 179 0 118 chr15 102814658 102814734 -680240 + A-rich Low_complexity Low_complexity 1 67 0 5 1369 963 50 0 0 chr15 102814916 102815037 -679937 + (TC)n Simple_repeat Simple_repeat 1 121 0 5 1369 233 265 22 22 chr15 102815839 102815948 -679026 + GA-rich Low_complexity Low_complexity 1 109 0 5 1369 497 44 15 0 chr15 102818476 102818544 -676430 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 5 1369 243 0 0 0 chr15 102818693 102818720 -676254 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1369 203 0 0 36 chr15 102819610 102819638 -675336 + (CATA)n Simple_repeat Simple_repeat 4 30 0 5 1369 396 0 0 0 chr15 102819638 102819682 -675292 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1369 202 333 0 0 chr15 102820694 102820766 -674208 + C-rich Low_complexity Low_complexity 1 72 0 6 1369 780 85 0 0 chr15 102820768 102820886 -674088 + (TC)n Simple_repeat Simple_repeat 1 118 0 6 1369 240 226 0 0 chr15 102823211 102823273 -671701 + GA-rich Low_complexity Low_complexity 2 63 0 6 1369 477 0 0 0 chr15 102823606 102823659 -671315 + (CA)n Simple_repeat Simple_repeat 1 53 0 6 1369 241 208 13 53 chr15 102823798 102823874 -671100 + GA-rich Low_complexity Low_complexity 2 74 0 6 1369 309 287 22 33 chr15 102824206 102824296 -670678 + L1MEg LINE L1 1845 1933 -4151 6 1369 510 17 0 0 chr15 102824878 102824937 -670037 + (GGA)n Simple_repeat Simple_repeat 1 59 0 6 1369 453 90 0 0 chr15 102827682 102827749 -667225 + (GAAA)n Simple_repeat Simple_repeat 3 69 0 6 1369 24 0 0 0 chr15 102827778 102827802 -667172 + AT_rich Low_complexity Low_complexity 1 24 0 6 1369 28 0 0 0 chr15 102829039 102829067 -665907 + AT_rich Low_complexity Low_complexity 1 28 0 6 1369 348 119 0 0 chr15 102829128 102829187 -665787 + (GA)n Simple_repeat Simple_repeat 1 59 0 6 1369 279 0 0 0 chr15 102831713 102831744 -663230 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1369 229 286 89 67 chr15 102832069 102832204 -662770 + RMER21A LTR ERV1 468 605 -342 6 1369 551 15 15 0 chr15 102839140 102839208 -655766 + (TC)n Simple_repeat Simple_repeat 2 70 0 6 1369 531 0 0 0 chr15 102848083 102848142 -646832 + (TC)n Simple_repeat Simple_repeat 1 59 0 6 1369 189 0 0 0 chr15 102848152 102848173 -646801 + (GA)n Simple_repeat Simple_repeat 2 22 0 6 1369 22 0 0 0 chr15 102848463 102848485 -646489 + GC_rich Low_complexity Low_complexity 1 22 0 6 1369 258 222 0 0 chr15 102851312 102851374 -643600 + (TA)n Simple_repeat Simple_repeat 2 63 0 6 1369 366 23 0 0 chr15 102851374 102851417 -643557 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1369 258 222 0 0 chr15 102851417 102851426 -643548 + (TA)n Simple_repeat Simple_repeat 1 9 0 6 1369 486 0 0 0 chr15 102853618 102853672 -641302 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 1369 450 0 0 0 chr15 102853672 102853722 -641252 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1369 653 129 7 0 chr15 102854492 102854631 -640343 + (TC)n Simple_repeat Simple_repeat 2 141 0 6 1369 316 278 287 0 chr15 102855504 102855518 -639456 - ID_B1 SINE B4 -1 223 132 6 1369 443 189 305 0 chr15 102855518 102855613 -639361 - B1_Mur2 SINE Alu -25 124 1 6 1369 225 0 0 0 chr15 102856672 102856697 -638277 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1369 286 23 47 0 chr15 102860004 102860047 -634927 + (TC)n Simple_repeat Simple_repeat 2 46 0 6 1369 29 0 0 0 chr15 102860540 102860569 -634405 + AT_rich Low_complexity Low_complexity 1 29 0 6 1369 414 0 0 0 chr15 102861214 102861260 -633714 + (TTA)n Simple_repeat Simple_repeat 2 47 0 6 1369 495 127 26 56 chr15 102862022 102862363 -632611 + (CAGAGA)n Simple_repeat Simple_repeat 1 331 0 6 1369 386 102 0 14 chr15 102862378 102862448 -632526 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 1369 387 0 0 0 chr15 102862448 102862490 -632484 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1369 216 162 0 0 chr15 102862711 102862748 -632226 + G-rich Low_complexity Low_complexity 1 37 0 6 1369 838 123 6 24 chr15 102863997 102864163 -630811 + CT-rich Low_complexity Low_complexity 3 165 0 6 1369 427 20 0 0 chr15 102864163 102864212 -630762 + (TC)n Simple_repeat Simple_repeat 1 49 0 6 1369 240 312 0 24 chr15 102865613 102865695 -629279 + C-rich Low_complexity Low_complexity 5 84 0 6 1369 28 29 0 0 chr15 102866486 102866521 -628453 + AT_rich Low_complexity Low_complexity 1 35 0 6 1369 295 89 18 18 chr15 102866674 102866731 -628243 + (TTTTG)n Simple_repeat Simple_repeat 2 58 0 6 1369 208 91 22 22 chr15 102868082 102868127 -626847 + (CAAAAA)n Simple_repeat Simple_repeat 3 47 0 6 1369 216 0 0 0 chr15 102868205 102868229 -626745 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1369 25 0 0 0 chr15 102869062 102869087 -625887 + AT_rich Low_complexity Low_complexity 1 25 0 6 1369 333 0 0 0 chr15 102870038 102870075 -624899 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1369 441 0 0 0 chr15 102870885 102870934 -624040 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 1369 291 113 0 0 chr15 102874119 102874172 -620802 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1369 222 302 156 0 chr15 102874888 102874984 -619990 - MIRb SINE MIR -23 245 135 6 1369 567 221 118 0 chr15 102874991 102875118 -619856 + B1_Mur2 SINE Alu 1 142 -7 6 1369 894 198 21 128 chr15 102875453 102875696 -619278 + ID_B1 SINE B4 3 219 -5 6 1369 870 186 7 0 chr15 102875732 102875877 -619097 + B1_Mus1 SINE Alu 3 148 0 6 1369 180 0 0 0 chr15 102876175 102876195 -618779 + (T)n Simple_repeat Simple_repeat 1 20 0 6 1369 1154 75 0 13 chr15 102876195 102876344 -618630 - B1_Mus1 SINE Alu 0 148 2 6 1369 222 303 118 56 chr15 102876601 102876762 -618212 - MIRm SINE MIR -104 172 2 6 1369 355 329 94 39 chr15 102877507 102877763 -617211 - L1MC5 LINE L1 -32 7929 7660 6 1369 471 18 0 0 chr15 102878507 102878563 -616411 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 1369 637 282 25 19 chr15 102879101 102879260 -615714 - RSINE1 SINE B4 -4 161 2 6 1369 951 251 135 17 chr15 102879474 102879822 -615152 - MLT1B LTR MaLR 0 390 2 6 1369 630 210 8 8 chr15 102879972 102880092 -614882 + PB1D9 SINE Alu 1 120 0 6 1369 1281 79 56 6 chr15 102880095 102880273 -614701 - B2_Mm2 SINE B2 -8 187 1 6 1369 21 0 0 0 chr15 102880275 102880296 -614678 + AT_rich Low_complexity Low_complexity 1 21 0 6 1369 347 250 26 0 chr15 102880296 102880372 -614602 - ID4_ SINE ID 0 83 6 6 1369 431 242 7 111 chr15 102880376 102880511 -614463 - ID_B1 SINE B4 0 224 104 6 1369 469 224 33 49 chr15 102880407 102880529 -614445 - B1F SINE Alu -20 129 10 6 1369 912 290 5 5 chr15 102880626 102880841 -614133 - B3 SINE B2 0 216 2 6 1369 184 290 14 28 chr15 102880916 102880987 -613987 - L3b LINE CR1 -174 308 239 6 1369 216 236 97 0 chr15 102881477 102881549 -613425 + MIR3 SINE MIR 113 191 -17 6 1369 180 320 106 53 chr15 102881506 102881638 -613336 - L2 LINE L2 -595 2824 2686 6 1369 630 180 9 0 chr15 102882505 102882616 -612358 + B1_Mus2 SINE Alu 35 146 -1 6 1369 210 256 204 68 chr15 102882775 102882863 -612111 + MIRc SINE MIR 38 137 -131 6 1369 440 173 12 47 chr15 102883199 102883274 -611700 + ID SINE ID 1 76 -148 6 1369 1341 68 0 0 chr15 102883274 102883451 -611523 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 6 1369 22 0 0 0 chr15 102884237 102884259 -610715 + AT_rich Low_complexity Low_complexity 1 22 0 6 1369 497 276 9 0 chr15 102884299 102884404 -610570 - PB1D7 SINE Alu -10 110 5 6 1369 316 319 0 0 chr15 102884435 102884507 -610467 + ID4 SINE ID 7 78 -5 6 1369 230 317 24 12 chr15 102884507 102884518 -610456 + B4A SINE B4 7 90 -202 6 1369 220 350 73 89 chr15 102884518 102884614 -610360 + B3A SINE B2 7 182 -16 6 1369 214 255 20 0 chr15 102884648 102884699 -610275 + CT-rich Low_complexity Low_complexity 3 54 0 6 1369 213 94 0 0 chr15 102885263 102885295 -609679 + (TTA)n Simple_repeat Simple_repeat 3 34 0 6 1369 251 340 81 62 chr15 102885656 102885816 -609158 + Charlie4z DNA MER1_type 4 166 -1 6 1369 22 0 0 0 chr15 102886358 102886380 -608594 + AT_rich Low_complexity Low_complexity 1 22 0 6 1369 201 159 0 0 chr15 102889066 102889110 -605864 + A-rich Low_complexity Low_complexity 1 44 0 6 1369 387 41 0 0 chr15 102890542 102890591 -604383 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1370 216 195 24 0 chr15 102891959 102892000 -602974 + (GGCTG)n Simple_repeat Simple_repeat 4 45 0 6 1370 252 86 0 0 chr15 102892242 102892277 -602697 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 6 1370 327 146 0 0 chr15 102892389 102892444 -602530 + (TC)n Simple_repeat Simple_repeat 2 56 0 6 1370 254 210 68 15 chr15 102892851 102892934 -602040 + PB1D10 SINE Alu 35 114 -6 6 1370 240 263 0 0 chr15 102892883 102892940 -602034 + ID_B1 SINE B4 168 224 0 6 1370 618 266 93 0 chr15 102893046 102893185 -601789 - ID_B1 SINE B4 -46 178 27 6 1370 435 219 181 31 chr15 102893498 102893625 -601349 - RSINE1 SINE B4 0 165 20 6 1370 373 207 60 24 chr15 102893667 102893751 -601223 + PB1D10 SINE Alu 17 103 -14 6 1370 262 366 0 0 chr15 102893842 102893913 -601061 - ID4_ SINE ID -11 72 2 6 1370 870 196 58 7 chr15 102894069 102894223 -600751 + B3 SINE B2 3 164 -52 6 1370 261 0 0 0 chr15 102894244 102894273 -600701 + (TAA)n Simple_repeat Simple_repeat 1 29 0 6 1370 1191 21 0 0 chr15 102895273 102895415 -599559 + (TCTCC)n Simple_repeat Simple_repeat 5 146 0 6 1370 834 152 0 45 chr15 102895471 102895627 -599347 + B1_Mur2 SINE Alu 1 148 -1 6 1370 443 301 218 9 chr15 102896702 102896913 -598061 + MIRb SINE MIR 6 266 -2 6 1370 324 358 16 62 chr15 102897156 102897284 -597690 - MER5B DNA MER1_type -48 130 9 6 1370 237 378 49 49 chr15 102898029 102898171 -596803 + MIRb SINE MIR 36 177 -91 6 1370 208 324 15 0 chr15 102898341 102898409 -596565 - MIR SINE MIR -110 152 84 6 1370 401 259 85 123 chr15 102898415 102898675 -596299 + MIR SINE MIR 13 262 0 6 1370 251 341 93 7 chr15 102899440 102899579 -595395 - MIR SINE MIR -42 220 70 6 1370 338 265 29 0 chr15 102900244 102900347 -594627 + PB1D10 SINE Alu 25 136 -14 7 1370 196 344 43 0 chr15 102900359 102900452 -594522 - MIR SINE MIR -60 148 52 7 1370 221 265 43 29 chr15 102901729 102901799 -593175 + L2b LINE L2 3300 3370 -5 7 1370 243 331 8 11 chr15 102901838 102901937 -593037 - MIRb SINE MIR -133 135 31 7 1370 751 148 0 9 chr15 102902441 102902557 -592417 + B3 SINE B2 15 129 -87 7 1370 396 0 0 0 chr15 102902560 102902604 -592370 + (CATA)n Simple_repeat Simple_repeat 4 47 0 7 1370 24 32 0 0 chr15 102902629 102902660 -592314 + AT_rich Low_complexity Low_complexity 1 31 0 7 1370 501 17 0 0 chr15 102903190 102903248 -591726 + (TC)n Simple_repeat Simple_repeat 1 58 0 7 1370 486 0 0 0 chr15 102903248 102903301 -591673 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 1370 825 194 0 0 chr15 102903313 102903442 -591532 + B1_Mur2 SINE Alu 2 130 -19 7 1370 1309 53 29 17 chr15 102903590 102903762 -591212 + B2_Mm1t SINE B2 1 174 -19 7 1370 1557 57 5 0 chr15 102903763 102903955 -591019 + B2_Mm1a SINE B2 1 193 0 7 1370 212 344 158 5 chr15 102903959 102904149 -590825 - L2a LINE L2 -284 3142 2924 7 1370 21 0 0 0 chr15 102904246 102904267 -590707 + AT_rich Low_complexity Low_complexity 1 21 0 7 1370 1726 165 13 3 chr15 102904273 102904571 -590403 + Lx5 LINE L1 6676 6976 -74 7 1370 717 208 0 0 chr15 102904628 102904753 -590221 + B1_Mus1 SINE Alu 2 126 -22 7 1370 517 173 150 0 chr15 102904758 102904891 -590083 - Lx7 LINE L1 0 7696 7544 7 1370 180 0 0 0 chr15 102906212 102906232 -588742 + (T)n Simple_repeat Simple_repeat 1 20 0 7 1370 250 200 257 0 chr15 102907519 102907589 -587385 - RSINE1 SINE B4 -33 132 45 7 1370 901 235 58 14 chr15 102907834 102908041 -586933 - B3 SINE B2 0 216 1 7 1370 333 0 0 0 chr15 102908359 102908396 -586578 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1370 25 0 0 0 chr15 102908513 102908538 -586436 + AT_rich Low_complexity Low_complexity 1 25 0 7 1370 398 250 0 0 chr15 102908548 102908624 -586350 + PB1D10 SINE Alu 31 106 -11 7 1370 778 149 2 1 chr15 102908619 102908740 -586234 + B1_Mus2 SINE Alu 17 136 -11 7 1370 1226 76 0 0 chr15 102908816 102908973 -586001 + B2_Mm2 SINE B2 2 158 -37 7 1370 288 0 0 0 chr15 102908974 102909006 -585968 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 7 1370 850 220 49 38 chr15 102909006 102909027 -585947 + B3 SINE B2 31 51 -165 7 1370 1406 221 113 29 chr15 102909027 102909372 -585602 + ORR1D1 LTR MaLR 1 374 0 7 1370 850 220 49 38 chr15 102909372 102909534 -585440 + B3 SINE B2 52 216 0 7 1370 552 293 197 0 chr15 102909699 102909938 -585036 - B4 SINE B4 -6 286 1 7 1370 531 176 120 0 chr15 102910016 102910124 -584850 + B1F2 SINE Alu 29 149 0 7 1370 501 17 0 0 chr15 102910131 102910189 -584785 + (GA)n Simple_repeat Simple_repeat 1 58 0 7 1370 520 217 104 44 chr15 102910273 102910408 -584566 + B1_Mur1 SINE Alu 2 144 -5 7 1370 213 222 22 0 chr15 102910502 102910547 -584427 + GA-rich Low_complexity Low_complexity 4 49 0 7 1370 1114 90 0 14 chr15 102910724 102910871 -584103 - B1_Mus2 SINE Alu -1 146 2 7 1370 21 0 0 0 chr15 102910976 102910997 -583977 + AT_rich Low_complexity Low_complexity 1 21 0 7 1370 710 266 0 12 chr15 102911024 102911184 -583790 - RSINE1 SINE B4 -6 159 2 7 1370 771 173 67 8 chr15 102911315 102911449 -583525 - B1_Mur3 SINE Alu -7 142 1 7 1370 582 227 0 0 chr15 102911473 102911583 -583391 - PB1D9 SINE Alu -9 111 2 7 1370 662 245 134 10 chr15 102915509 102915703 -579271 + ID_B1 SINE B4 5 222 -2 7 1370 1138 99 82 0 chr15 102915808 102915979 -578995 - B2_Mm2 SINE B2 -3 192 8 7 1370 293 351 52 12 chr15 102917693 102917866 -577108 + L2b LINE L2 3179 3358 -17 7 1370 695 138 16 0 chr15 102918139 102918262 -576712 + CT-rich Low_complexity Low_complexity 4 128 0 7 1370 1823 201 41 11 chr15 102919305 102919667 -575307 + MTEb LTR MaLR 7 379 0 7 1370 243 354 78 8 chr15 102919813 102919941 -575033 - MER5A1 DNA MER1_type 0 166 30 7 1370 318 268 48 12 chr15 102920140 102920223 -574751 + PB1D10 SINE Alu 1 86 -31 7 1370 213 65 0 0 chr15 102922394 102922425 -572549 + (TGGA)n Simple_repeat Simple_repeat 1 31 0 7 1370 1033 161 0 0 chr15 102922430 102922579 -572395 - B1_Mur4 SINE Alu -1 149 1 7 1370 273 259 0 65 chr15 102922702 102922764 -572210 - RSINE1 SINE B4 -93 72 15 7 1370 339 25 0 0 chr15 102922797 102922837 -572137 + (TA)n Simple_repeat Simple_repeat 2 41 0 7 1370 487 246 125 51 chr15 102922840 102923015 -571959 - B3 SINE B2 -15 201 1 7 1370 771 261 55 10 chr15 102923031 102923232 -571742 - B3 SINE B2 0 216 7 7 1370 329 304 196 0 chr15 102923284 102923422 -571552 - MIR SINE MIR -83 179 15 7 1370 634 248 19 32 chr15 102923925 102924083 -570891 + ID_B1 SINE B4 2 157 -67 7 1370 426 293 90 17 chr15 102924543 102924720 -570254 + MIR SINE MIR 25 214 -48 7 1370 683 234 7 28 chr15 102924721 102924866 -570108 + ID_B1 SINE B4 81 222 -2 7 1370 847 189 25 25 chr15 102925437 102925600 -569374 + RSINE1 SINE B4 3 165 0 7 1370 848 253 54 11 chr15 102925675 102925748 -569226 + ID_B1 SINE B4 20 211 -13 7 1370 278 289 69 117 chr15 102925748 102925859 -569115 - YREP_Mm Unknown Unknown -1516 296 174 7 1370 411 21 0 0 chr15 102925859 102925907 -569067 + (GA)n Simple_repeat Simple_repeat 1 48 0 7 1370 278 289 69 117 chr15 102925907 102926026 -568948 - YREP_Mm Unknown Unknown -1639 173 78 7 1370 414 302 74 5 chr15 102926627 102926830 -568144 + L1MB8 LINE L1 5731 5947 -231 7 1370 290 252 124 19 chr15 102927681 102927703 -567271 - PB1D10 SINE Alu 0 117 6 7 1370 293 219 0 76 chr15 102927703 102927782 -567192 - ID_B1 SINE B4 -65 159 87 7 1370 339 287 79 53 chr15 102927977 102928081 -566893 + PB1D10 SINE Alu 1 108 -9 7 1370 443 322 7 14 chr15 102928081 102928229 -566745 + B1F SINE Alu 3 149 0 7 1370 702 229 0 46 chr15 102929551 102929702 -565272 + ID_B1 SINE B4 81 224 0 7 1370 273 317 56 35 chr15 102930094 102930238 -564736 - MIR SINE MIR -9 253 107 7 1370 808 172 20 14 chr15 102931048 102931195 -563779 + B1_Mur1 SINE Alu 1 148 -1 7 1370 423 0 0 0 chr15 102931628 102931675 -563299 + (TAA)n Simple_repeat Simple_repeat 2 48 0 7 1370 183 80 0 0 chr15 102932168 102932193 -562781 + (CCCCCG)n Simple_repeat Simple_repeat 6 30 0 7 1370 378 0 0 0 chr15 102934520 102934562 -560412 + (TTAGGG)n Simple_repeat Simple_repeat 5 46 0 7 1370 245 86 0 28 chr15 102934563 102934599 -560375 + B1F SINE Alu 9 43 -106 7 1370 477 0 0 0 chr15 102935260 102935313 -559661 + (GA)n Simple_repeat Simple_repeat 2 54 0 7 1370 677 242 0 45 chr15 102935661 102935817 -559157 - B1F SINE Alu 0 149 1 7 1370 369 235 27 0 chr15 102936202 102936285 -558689 - ID4 SINE ID -61 91 7 7 1370 245 209 0 23 chr15 102936376 102936420 -558554 + ID4_ SINE ID 39 81 -2 7 1370 224 122 24 0 chr15 102936640 102936681 -558293 + (TCC)n Simple_repeat Simple_repeat 1 42 0 7 1370 647 84 11 0 chr15 102940295 102940390 -554584 + (TC)n Simple_repeat Simple_repeat 1 96 0 7 1370 442 256 20 11 chr15 102941168 102941306 -553668 - PB1D10 SINE Alu 0 149 8 7 1370 221 309 70 23 chr15 102941230 102941316 -553658 - B4A SINE B4 -120 172 83 7 1370 232 304 24 48 chr15 102941425 102941508 -553466 + ID SINE ID 2 82 -142 7 1370 811 173 7 35 chr15 102941512 102941656 -553318 - B1_Mur3 SINE Alu 0 149 10 7 1370 957 232 38 10 chr15 102941681 102941890 -553084 + B3 SINE B2 2 216 0 7 1370 681 213 0 47 chr15 102942348 102942476 -552498 + B1_Mus2 SINE Alu 2 123 -24 7 1370 207 0 0 0 chr15 102942476 102942499 -552475 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1370 836 253 28 0 chr15 102942507 102942689 -552285 + B3 SINE B2 1 187 -29 7 1370 324 0 0 0 chr15 102942710 102942746 -552228 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1370 275 217 33 0 chr15 102943332 102943392 -551582 - PB1D10 SINE Alu 0 117 56 7 1370 200 71 0 0 chr15 102943687 102943715 -551259 - MER91B DNA Tip100 -126 64 37 7 1370 468 0 0 0 chr15 102944468 102944520 -550454 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 1370 234 0 0 0 chr15 102944521 102944547 -550427 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 1370 432 0 0 0 chr15 102944547 102944594 -550380 + (GA)n Simple_repeat Simple_repeat 1 48 0 7 1370 704 208 16 0 chr15 102944594 102944719 -550255 - RSINE1 SINE B4 -25 140 14 7 1370 543 258 17 12 chr15 102947981 102948120 -546854 + B1F SINE Alu 1 136 -14 7 1370 494 242 8 70 chr15 102948713 102948842 -546132 + PB1 SINE Alu 5 125 -2 7 1370 1072 125 0 0 chr15 102949203 102949347 -545627 + B1_Mur4 SINE Alu 2 145 -5 7 1370 986 89 14 0 chr15 102949351 102949497 -545477 + (GAAA)n Simple_repeat Simple_repeat 2 149 0 7 1370 547 165 33 0 chr15 102949497 102949618 -545356 + GA-rich Low_complexity Low_complexity 2 126 0 7 1370 306 307 18 0 chr15 102950088 102950202 -544772 - MER121 Unknown Unknown -179 233 118 7 1370 851 87 196 51 chr15 102950405 102950563 -544411 - B2_Mm2 SINE B2 -14 181 1 7 1370 243 0 0 0 chr15 102951626 102951653 -543321 + (TCTG)n Simple_repeat Simple_repeat 4 30 0 7 1370 764 176 38 0 chr15 102951653 102951784 -543190 - B1_Mus1 SINE Alu -8 140 5 8 1370 347 236 122 9 chr15 102952419 102952526 -542448 + MIRc SINE MIR 84 202 -66 8 1370 405 0 0 0 chr15 102953055 102953100 -541874 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 1370 480 278 8 17 chr15 102956704 102956821 -538153 - PB1D10 SINE Alu -1 116 1 8 1370 245 250 0 0 chr15 102956854 102956906 -538068 - ID4 SINE ID -30 53 2 8 1370 591 239 0 0 chr15 102957040 102957157 -537817 + PB1D10 SINE Alu 1 117 0 8 1370 221 273 51 13 chr15 102957409 102957487 -537487 - MIR3 SINE MIR -31 177 97 8 1370 582 218 22 8 chr15 102957778 102957912 -537062 - ORR1E LTR MaLR -223 136 1 8 1370 879 254 15 0 chr15 102958066 102958267 -536707 + ID_B1 SINE B4 20 223 -1 8 1370 186 322 0 0 chr15 102958750 102958809 -536165 - L3 LINE CR1 -299 4190 4132 8 1370 722 189 44 0 chr15 102960145 102960281 -534693 - B1_Mur2 SINE Alu -7 143 1 8 1370 22 35 0 0 chr15 102960293 102960322 -534652 + AT_rich Low_complexity Low_complexity 1 29 0 8 1370 259 246 228 23 chr15 102960500 102960671 -534303 - MIR3 SINE MIR -2 206 1 8 1370 589 265 36 7 chr15 102960846 102960983 -533991 + ID_B1 SINE B4 67 207 -17 8 1370 204 40 0 0 chr15 102960985 102961010 -533964 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 8 1370 475 280 19 0 chr15 102961014 102961121 -533853 + PB1D10 SINE Alu 2 110 -7 8 1370 555 256 8 0 chr15 102961134 102961251 -533723 + B1_Mur2 SINE Alu 1 118 -31 8 1370 999 208 69 0 chr15 102961255 102961457 -533517 + B3 SINE B2 1 216 0 8 1370 336 350 70 37 chr15 102961457 102961513 -533461 + B4 SINE B4 206 268 -24 8 1370 213 47 70 0 chr15 102962051 102962094 -532880 + (CCA)n Simple_repeat Simple_repeat 1 46 0 8 1370 436 288 27 9 chr15 102962546 102962655 -532319 + ORR1E LTR MaLR 6 116 -243 8 1370 646 268 169 12 chr15 102962655 102962904 -532070 + B4A SINE B4 2 289 -3 8 1370 315 277 154 55 chr15 102962961 102963218 -531756 + ORR1E LTR MaLR 88 378 -1 8 1370 498 229 191 53 chr15 102966537 102966726 -528248 - B3 SINE B2 0 216 2 8 1370 608 152 0 19 chr15 102966761 102966868 -528106 - B1_Mur2 SINE Alu 0 149 45 8 1370 405 58 0 0 chr15 102967008 102967060 -527914 + (TTCC)n Simple_repeat Simple_repeat 1 52 0 8 1370 248 211 79 66 chr15 102968483 102968559 -526415 + MIRb SINE MIR 32 108 -160 8 1370 1063 212 105 11 chr15 102968751 102969018 -525956 + B4A SINE B4 1 292 0 8 1370 238 148 0 36 chr15 102969020 102969076 -525898 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 1370 214 82 20 39 chr15 102969082 102969133 -525841 + (CAGAGA)n Simple_repeat Simple_repeat 2 51 0 8 1370 203 192 19 0 chr15 102969145 102969197 -525777 + (CA)n Simple_repeat Simple_repeat 1 53 0 8 1370 246 350 40 48 chr15 102969310 102969436 -525538 + MIRb SINE MIR 76 204 -64 8 1370 232 393 0 0 chr15 102970700 102970789 -524185 + PB1D10 SINE Alu 2 90 -27 8 1370 445 289 83 0 chr15 102970709 102970830 -524144 + ID_B1 SINE B4 92 222 -2 8 1370 316 338 88 50 chr15 102970910 102971069 -523905 + RSINE1 SINE B4 1 165 0 8 1370 885 225 66 25 chr15 102971120 102971316 -523658 - B3 SINE B2 -10 206 3 8 1370 216 179 0 25 chr15 102971335 102971375 -523599 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1370 1065 189 13 80 chr15 102971375 102971599 -523375 + B3 SINE B2 5 213 -3 8 1370 390 296 113 54 chr15 102971630 102971816 -523158 + B3A SINE B2 2 198 0 8 1370 340 194 27 0 chr15 102971829 102971904 -523070 + PB1D9 SINE Alu 44 147 0 8 1370 371 212 11 34 chr15 102972497 102972585 -522389 - ID_B1 SINE B4 -16 208 123 8 1370 585 226 0 0 chr15 102972588 102972874 -522100 + CT-rich Low_complexity Low_complexity 1 286 0 8 1370 639 196 0 0 chr15 102972912 102973085 -521889 + CT-rich Low_complexity Low_complexity 1 173 0 8 1370 454 155 0 27 chr15 102973109 102973255 -521719 + CT-rich Low_complexity Low_complexity 4 145 0 8 1370 389 256 123 8 chr15 102973278 102973400 -521574 - ID_B1 SINE B4 -86 138 3 8 1370 186 362 21 11 chr15 102973828 102973923 -521051 + MER5A DNA MER1_type 2 97 -92 8 1370 766 251 17 17 chr15 102974124 102974302 -520672 + B3 SINE B2 1 178 -38 8 1370 281 288 30 0 chr15 102974587 102974653 -520321 - ID4_ SINE ID -8 75 8 8 1370 711 303 184 41 chr15 102975851 102976509 -518465 + L2 LINE L2 2329 3080 -339 8 1370 24 32 0 0 chr15 102977372 102977403 -517571 + GC_rich Low_complexity Low_complexity 1 31 0 8 1370 230 333 32 32 chr15 102978733 102978826 -516148 - L3b LINE CR1 -155 327 235 8 1370 180 0 0 0 chr15 102979002 102979022 -515952 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8 1370 1132 61 0 26 chr15 102979056 102979208 -515766 + B1_Mus1 SINE Alu 1 148 0 8 1370 1316 101 17 0 chr15 102979221 102979399 -515575 - B2_Mm2 SINE B2 -14 181 1 8 1370 195 42 0 0 chr15 102979410 102979434 -515540 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 1370 189 0 0 0 chr15 102979664 102979685 -515289 + (CA)n Simple_repeat Simple_repeat 1 21 0 8 1370 624 27 0 0 chr15 102980170 102980244 -514730 + (GA)n Simple_repeat Simple_repeat 1 74 0 8 1370 270 350 34 69 chr15 102980433 102980608 -514366 + MER5B DNA MER1_type 10 178 0 8 1370 401 253 100 0 chr15 102980619 102980771 -514203 + MER3 DNA MER1_type 2 168 -41 8 1370 581 297 145 5 chr15 102980812 102981005 -513969 + ID_B1 SINE B4 2 221 -3 8 1370 967 203 67 38 chr15 102981084 102981294 -513680 - B3 SINE B2 0 216 1 8 1370 730 208 14 7 chr15 102981322 102981467 -513507 + B1_Mus2 SINE Alu 2 147 0 8 1370 410 221 157 48 chr15 102981480 102981627 -513347 - RSINE1 SINE B4 0 165 3 8 1370 271 300 0 41 chr15 102981704 102981777 -513197 - B4A SINE B4 0 292 223 8 1370 576 274 52 0 chr15 102981856 102982009 -512965 - B4A SINE B4 -2 290 130 8 1370 758 266 91 72 chr15 102982302 102982675 -512299 + MLT1B LTR MaLR 1 380 -10 8 1370 324 301 58 7 chr15 102982861 102982998 -511976 + ORR1E LTR MaLR 1 144 -215 8 1370 268 231 345 25 chr15 102983583 102983783 -511191 - MER21B LTR ERV1 -154 709 446 8 1370 316 272 0 40 chr15 102983783 102983874 -511100 + ID4_ SINE ID 8 95 -57 8 1370 234 0 0 0 chr15 102983874 102983900 -511074 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 8 1370 228 333 0 45 chr15 102983900 102983940 -511034 + BC1_Mm scRNA scRNA 96 132 -20 8 1370 300 283 105 35 chr15 102984003 102984146 -510828 - MER21B LTR ERV1 -570 293 141 8 1370 262 294 57 40 chr15 102984841 102984965 -510009 - MIRb SINE MIR -30 238 113 8 1370 651 214 68 15 chr15 102984977 102985110 -509864 + B1_Mur1 SINE Alu 2 141 -8 8 1370 571 125 0 0 chr15 102985174 102985262 -509712 + B1_Mus2 SINE Alu 60 147 0 8 1370 569 226 57 0 chr15 102985432 102985556 -509418 - ID_B1 SINE B4 0 224 94 8 1370 261 0 0 0 chr15 102987226 102987255 -507719 + (CA)n Simple_repeat Simple_repeat 1 29 0 8 1370 1841 169 13 32 chr15 102987557 102988006 -506968 + RMER17C LTR ERVK 21 437 -521 8 1370 508 237 167 0 chr15 102988557 102988713 -506261 - MTEb LTR MaLR -4 375 194 8 1370 601 243 73 0 chr15 102988762 102988898 -506076 - B1F2 SINE Alu -3 146 1 8 1370 1965 160 58 25 chr15 102988917 102989315 -505659 + MTD LTR MaLR 1 411 -8 8 1370 601 261 19 6 chr15 102989319 102989477 -505497 - MTEb LTR MaLR -219 160 1 8 1370 340 306 35 35 chr15 102989697 102989812 -505162 - B1F SINE Alu -20 129 15 8 1370 573 160 150 16 chr15 102989904 102990031 -504943 + B1_Mus2 SINE Alu 2 145 -2 8 1370 246 32 0 0 chr15 102990050 102990081 -504893 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 1370 567 244 0 31 chr15 102990105 102990232 -504742 - B3A SINE B2 -75 123 1 8 1370 405 245 128 0 chr15 102990244 102990346 -504628 - ID_B1 SINE B4 -6 218 104 8 1370 317 221 31 110 chr15 102990346 102990364 -504610 - PB1D10 SINE Alu 0 89 1 8 1370 807 257 71 5 chr15 102990522 102990733 -504241 - MIR SINE MIR -24 238 14 8 1370 230 299 0 38 chr15 102990873 102990953 -504021 + MIRb SINE MIR 103 179 -89 8 1370 215 237 51 0 chr15 102991196 102991255 -503719 + L2c LINE L2 3096 3157 -230 8 1370 303 327 29 142 chr15 102991316 102991626 -503348 + ORR1E LTR MaLR 44 318 -41 8 1370 182 302 80 40 chr15 102991626 102991726 -503248 + MER5B DNA MER1_type 75 178 0 8 1370 612 252 14 7 chr15 102992168 102992308 -502666 - B1F1 SINE Alu -8 141 1 8 1370 21 36 0 0 chr15 102992964 102992992 -501982 + AT_rich Low_complexity Low_complexity 1 28 0 8 1370 514 303 49 0 chr15 102993049 102993191 -501783 + ID_B1 SINE B4 5 153 -71 8 1370 234 0 0 0 chr15 102993198 102993224 -501750 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 1370 503 251 55 60 chr15 102993335 102993517 -501457 + B2_Mm2 SINE B2 15 195 0 8 1370 424 47 31 0 chr15 102994065 102994129 -500845 + B1_Mus2 SINE Alu 82 147 0 8 1370 259 249 83 70 chr15 102994267 102994408 -500566 - MLT2B3 LTR ERVL 0 554 409 8 1370 315 314 66 44 chr15 102994413 102994596 -500378 - MLT2B3 LTR ERVL -339 215 29 8 1370 445 283 0 0 chr15 102995289 102995409 -499565 + ID_B1 SINE B4 105 224 0 8 1370 198 103 0 0 chr15 102995548 102995577 -499397 + (TGG)n Simple_repeat Simple_repeat 1 29 0 8 1370 525 219 110 31 chr15 102995577 102995704 -499270 - B1_Mur2 SINE Alu -8 141 5 8 1370 339 181 48 12 chr15 102996322 102996406 -498568 + MIR SINE MIR 64 150 -112 8 1370 252 274 48 0 chr15 102996707 102996769 -498205 + ID4_ SINE ID 2 66 -17 8 1370 192 77 0 0 chr15 102996775 102996801 -498173 + (CA)n Simple_repeat Simple_repeat 2 27 0 8 1370 493 202 63 18 chr15 102996884 102996995 -497979 + PB1D7 SINE Alu 2 117 -3 8 1370 552 281 20 20 chr15 102997007 102997156 -497818 + RSINE1 SINE B4 13 161 -4 9 1370 218 320 13 0 chr15 102998798 102998873 -496101 + ID2 SINE ID 8 83 0 9 1370 574 304 5 72 chr15 102998816 102999025 -495949 + ID_B1 SINE B4 28 222 -2 9 1370 205 171 0 0 chr15 102999677 102999718 -495256 + (CCCG)n Simple_repeat Simple_repeat 2 42 0 9 1370 276 283 115 0 chr15 103000087 103000200 -494774 - L3b LINE CR1 -155 327 202 1 1370 294 129 0 0 chr15 103001198 103001260 -493714 + (TC)n Simple_repeat Simple_repeat 2 63 0 2 1370 279 0 0 0 chr15 103001260 103001291 -493683 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1370 209 372 25 44 chr15 103001403 103001563 -493411 + L2c LINE L2 3009 3165 -222 4 1370 407 246 34 34 chr15 103002013 103002131 -492843 - PB1D7 SINE Alu -1 119 2 5 1370 188 289 140 40 chr15 103003204 103003365 -491609 + MIRb SINE MIR 6 178 -30 6 1370 242 286 107 0 chr15 103003418 103003474 -491500 - B1F SINE Alu -86 63 2 7 1370 242 311 44 11 chr15 103003491 103003582 -491392 + B4A SINE B4 57 150 -142 8 1370 513 196 134 0 chr15 103003529 103003642 -491332 + B1_Mur4 SINE Alu 13 141 -9 9 1370 198 0 0 0 chr15 103003642 103003664 -491310 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1370 435 137 0 0 chr15 103005824 103005897 -489077 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 1370 180 97 0 0 chr15 103005906 103005937 -489037 + (ACTG)n Simple_repeat Simple_repeat 1 31 0 1 1370 249 109 0 0 chr15 103005975 103006021 -488953 + (TCTG)n Simple_repeat Simple_repeat 4 49 0 1 1370 715 219 51 0 chr15 103006024 103006161 -488813 - B3 SINE B2 -29 187 44 1 1370 239 351 39 39 chr15 103006488 103006669 -488305 + MIRc SINE MIR 81 261 -7 1 1370 402 270 59 147 chr15 103006683 103006887 -488087 + ID_B1 SINE B4 6 191 -33 1 1370 180 0 0 0 chr15 103006887 103006907 -488067 + (ATG)n Simple_repeat Simple_repeat 3 22 0 1 1370 261 57 0 0 chr15 103006907 103006942 -488032 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 1370 631 218 67 15 chr15 103006956 103007091 -487883 - B1_Mur2 SINE Alu -6 143 2 1 1370 201 360 61 26 chr15 103007334 103007448 -487526 + MIR3 SINE MIR 72 189 -19 2 1370 305 263 74 0 chr15 103008501 103008596 -486378 + MIRb SINE MIR 87 188 -80 2 1370 983 205 27 62 chr15 103010659 103010883 -484091 - B3 SINE B2 0 216 1 2 1370 22 0 0 0 chr15 103011321 103011343 -483631 + AT_rich Low_complexity Low_complexity 1 22 0 2 1370 328 296 45 0 chr15 103012146 103012255 -482719 + ID_B1 SINE B4 68 181 -43 2 1370 216 111 0 0 chr15 103013156 103013192 -481782 + (CCCCG)n Simple_repeat Simple_repeat 2 37 0 2 1370 372 287 59 10 chr15 103014959 103015061 -479913 + PB1D10 SINE Alu 10 116 -1 2 1370 1156 76 0 0 chr15 103015077 103015221 -479753 + B1_Mus1 SINE Alu 2 145 -3 2 1370 322 325 98 16 chr15 103015297 103015419 -479555 + B4 SINE B4 73 204 -88 2 1370 706 225 0 0 chr15 103015313 103015442 -479532 + B1F1 SINE Alu 10 138 -11 2 1370 313 235 49 12 chr15 103015482 103015564 -479410 + ID SINE ID 3 87 -137 3 1370 346 220 4 37 chr15 103015564 103015581 -479393 + ID4 SINE ID 3 93 -59 3 1370 1148 65 0 0 chr15 103015767 103015906 -479068 + B1_Mus1 SINE Alu 2 140 -8 3 1370 191 61 30 0 chr15 103015906 103015939 -479035 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 3 1370 885 25 225 0 chr15 103016789 103016909 -478065 + B1_Mus2 SINE Alu 1 147 0 3 1370 233 20 80 20 chr15 103016909 103016959 -478015 + (CAAAA)n Simple_repeat Simple_repeat 1 53 0 3 1370 344 255 123 84 chr15 103017028 103017182 -477792 - RSINE1 SINE B4 -2 163 4 3 1370 767 146 18 117 chr15 103017231 103017394 -477580 + B1_Mur1 SINE Alu 3 149 0 3 1370 257 267 47 0 chr15 103017397 103017483 -477491 - B3 SINE B2 -7 209 120 3 1370 650 250 175 36 chr15 103018723 103018889 -476085 + ID_B1 SINE B4 6 194 -30 3 1370 353 232 158 0 chr15 103018978 103019073 -475901 + PB1D10 SINE Alu 1 110 -7 4 1370 393 247 21 31 chr15 103019197 103019293 -475681 + B3A SINE B2 2 96 -102 4 1370 213 303 44 124 chr15 103019293 103019310 -475664 + B4 SINE B4 2 105 -187 4 1370 216 0 0 0 chr15 103020301 103020325 -474649 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 4 1370 304 222 167 0 chr15 103020335 103020425 -474549 - PB1D9 SINE Alu -13 107 3 4 1370 248 234 130 0 chr15 103021810 103021887 -473087 + BC1_Mm scRNA scRNA 3 89 -63 4 1371 237 327 9 70 chr15 103023372 103023487 -471487 - MTE-int LTR MaLR -236 1344 1237 4 1371 932 151 14 0 chr15 103023680 103023826 -471148 + B1_Mus1 SINE Alu 1 148 0 4 1371 352 250 0 0 chr15 103024595 103024659 -470315 + ID4 SINE ID 5 68 -15 4 1371 263 239 82 49 chr15 103024685 103024788 -470186 + B1F SINE Alu 15 117 -32 4 1371 792 246 78 49 chr15 103026458 103026663 -468311 + B3 SINE B2 6 216 0 5 1371 539 271 64 7 chr15 103026735 103026876 -468098 - B1_Mur1 SINE Alu 0 149 1 5 1371 1075 103 0 0 chr15 103026994 103027139 -467835 + B2_Mm2 SINE B2 2 146 -49 5 1371 256 327 74 105 chr15 103027139 103027223 -467751 + ID_B1 SINE B4 2 223 -1 5 1371 264 241 138 0 chr15 103027263 103027321 -467653 + ID4 SINE ID 15 80 -3 5 1371 289 243 13 51 chr15 103027740 103027818 -467156 - PB1D10 SINE Alu 0 117 43 5 1371 736 220 65 134 chr15 103030402 103030633 -464341 + B3 SINE B2 2 216 0 5 1371 375 230 138 0 chr15 103030687 103030774 -464200 + ID_B1 SINE B4 112 210 -14 5 1371 291 194 48 0 chr15 103030723 103030785 -464189 + B1F SINE Alu 82 146 -3 5 1371 180 0 0 0 chr15 103031377 103031397 -463577 + (CAAAC)n Simple_repeat Simple_repeat 2 21 0 5 1371 1218 62 0 0 chr15 103031598 103031744 -463230 + B1_Mm SINE Alu 2 147 0 6 1371 198 0 0 0 chr15 103031744 103031766 -463208 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1371 511 256 25 33 chr15 103032346 103032467 -462507 + RSINE1 SINE B4 4 123 -42 6 1371 987 71 71 0 chr15 103033193 103033320 -461654 + B1_Mus1 SINE Alu 1 136 -12 6 1371 234 0 0 0 chr15 103033321 103033347 -461627 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 1371 534 319 0 0 chr15 103033433 103033571 -461403 + RSINE1 SINE B4 28 165 0 6 1371 29 0 0 0 chr15 103033571 103033600 -461374 + AT_rich Low_complexity Low_complexity 1 29 0 6 1371 417 198 130 40 chr15 103033616 103033716 -461258 + B1_Mur1 SINE Alu 38 146 -3 6 1371 631 214 0 0 chr15 103033795 103033912 -461062 + B1_Mur3 SINE Alu 32 148 -1 6 1371 342 373 8 45 chr15 103033993 103034125 -460849 - MER5B DNA MER1_type -44 134 8 6 1371 360 314 54 60 chr15 103034464 103034613 -460361 + B1F1 SINE Alu 1 148 -1 7 1371 678 322 48 10 chr15 103034613 103034820 -460154 + ID_B1 SINE B4 1 215 -9 7 1371 231 294 0 0 chr15 103034867 103034918 -460056 + B4 SINE B4 118 168 -124 7 1371 1216 48 14 0 chr15 103034950 103035097 -459877 + B1_Mur4 SINE Alu 2 150 0 7 1371 212 273 25 25 chr15 103035145 103035224 -459750 + (CATATA)n Simple_repeat Simple_repeat 5 83 0 7 1371 224 317 156 18 chr15 103035311 103035342 -459632 - B2_Mm1a SINE B2 0 193 43 7 1371 431 266 123 15 chr15 103035342 103035472 -459502 - RSINE1 SINE B4 -11 154 11 7 1371 788 234 18 6 chr15 103035524 103035687 -459287 + B3A SINE B2 14 178 -20 7 1371 265 291 76 0 chr15 103036287 103036366 -458608 + BC1_Mm scRNA scRNA 5 89 -63 7 1371 375 261 104 21 chr15 103036512 103036707 -458267 + L1MB7 LINE L1 5677 5893 -291 7 1371 498 222 0 20 chr15 103036798 103036899 -458075 + B1_Mus2 SINE Alu 49 147 0 8 1371 1245 48 0 0 chr15 103036903 103037048 -457926 + B1_Mm SINE Alu 2 146 -1 8 1371 260 79 15 73 chr15 103037050 103037092 -457882 + A-rich Low_complexity Low_complexity 3 42 0 8 1371 726 72 333 0 chr15 103037092 103037203 -457771 + B1_Mus1 SINE Alu 1 148 0 8 1371 260 79 15 73 chr15 103037203 103037228 -457746 + A-rich Low_complexity Low_complexity 43 66 0 8 1371 433 200 160 132 chr15 103037302 103037446 -457528 - B1_Mur4 SINE Alu 0 150 3 8 1371 373 216 266 67 chr15 103037509 103037675 -457299 + B3A SINE B2 1 199 -17 8 1371 348 194 25 16 chr15 103037683 103037773 -457201 + B1_Mur3 SINE Alu 9 129 -20 8 1371 1041 96 13 40 chr15 103037784 103037936 -457038 - B1_Mus1 SINE Alu 0 148 1 8 1371 318 26 0 0 chr15 103037942 103037981 -456993 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 8 1371 1037 52 22 7 chr15 103037981 103038116 -456858 - B1_Mus2 SINE Alu -10 137 1 9 1371 263 246 0 55 chr15 103038216 103038289 -456685 + ID4_ SINE ID 4 72 -11 9 1371 453 306 32 16 chr15 103038331 103038457 -456517 - B1_Mur1 SINE Alu -21 128 1 9 1371 439 269 13 0 chr15 103038467 103038569 -456405 - B1F SINE Alu -8 112 8 9 1371 1271 41 0 0 chr15 103038595 103038742 -456232 - B1_Mus2 SINE Alu 0 147 1 9 1371 1512 49 16 0 chr15 103038792 103038975 -455999 + B2_Mm2 SINE B2 2 187 -8 9 1371 234 328 0 0 chr15 103039123 103039190 -455784 + B4A SINE B4 122 188 -104 9 1371 866 99 122 0 chr15 103039206 103039337 -455637 + B1_Mus1 SINE Alu 2 148 0 9 1371 250 324 13 13 chr15 103039612 103039687 -455287 + MTC-int LTR MaLR 180 254 -1004 9 1371 1235 55 0 0 chr15 103039689 103039835 -455139 + B1_Mus2 SINE Alu 2 147 0 9 1371 626 281 122 62 chr15 103039873 103040283 -454691 + MTC-int LTR MaLR 407 949 -309 9 1371 824 159 225 11 chr15 103040328 103040506 -454468 + B3 SINE B2 1 216 0 1 1371 1378 69 11 0 chr15 103040512 103040687 -454287 - B2_Mm1t SINE B2 -14 179 3 1 1371 2287 173 113 18 chr15 103040711 103040724 -454250 + RLTR20A LTR ERVK 1 13 -528 1 1371 1302 103 5 32 chr15 103040724 103040739 -454235 - B2_Mm2 SINE B2 -10 185 174 1 1371 315 0 0 0 chr15 103040739 103040774 -454200 + (TTTC)n Simple_repeat Simple_repeat 1 35 0 1 1371 1302 103 5 32 chr15 103040774 103040948 -454026 - B2_Mm2 SINE B2 -22 173 1 1 1371 2287 173 113 18 chr15 103040948 103041107 -453867 + RLTR20A LTR ERVK 14 190 -351 1 1371 198 0 0 0 chr15 103041107 103041129 -453845 + (TGGGGG)n Simple_repeat Simple_repeat 6 27 0 1 1371 2287 173 113 18 chr15 103041129 103041367 -453607 + RLTR20A LTR ERVK 191 449 -92 1 1371 252 0 0 0 chr15 103041367 103041395 -453579 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 1371 2287 173 113 18 chr15 103041395 103041476 -453498 + RLTR20A LTR ERVK 450 539 -2 1 1371 1377 64 26 16 chr15 103041501 103041692 -453282 + B2_Mm2 SINE B2 2 194 -1 1 1371 238 246 105 40 chr15 103041698 103041774 -453200 + ID_B1 SINE B4 143 223 -1 1 1371 284 271 16 16 chr15 103042058 103042130 -452844 + B4 SINE B4 31 102 -190 1 1371 229 196 157 0 chr15 103042321 103042372 -452602 - PB1D9 SINE Alu -40 80 22 1 1371 432 290 137 44 chr15 103042389 103042638 -452336 - B4A SINE B4 0 292 21 1 1371 901 206 80 5 chr15 103042818 103043018 -451956 + B3 SINE B2 2 216 0 1 1371 808 136 83 8 chr15 103043029 103043162 -451812 + B1_Mur3 SINE Alu 7 149 0 1 1371 197 355 0 0 chr15 103043246 103043308 -451666 - MIR SINE MIR -186 76 15 1 1371 1099 78 14 0 chr15 103044049 103044190 -450784 + B1_Mm SINE Alu 5 147 0 1 1371 348 125 0 0 chr15 103044340 103044404 -450570 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 1371 26 30 0 0 chr15 103045124 103045157 -449817 + AT_rich Low_complexity Low_complexity 1 33 0 1 1371 1338 181 91 61 chr15 103046387 103046781 -448193 - RMER17C LTR ERVK -4 406 1 1 1371 291 333 44 0 chr15 103047101 103047191 -447783 + ID_B1 SINE B4 128 221 -3 1 1371 848 188 105 21 chr15 103047354 103047544 -447430 + B3 SINE B2 5 210 -6 1 1371 761 262 73 21 chr15 103047568 103047914 -447060 + L1MA4 LINE L1 5637 5980 -1716 1 1371 319 257 78 39 chr15 103048004 103048081 -446893 + B1_Mus2 SINE Alu 1 80 -70 1 1371 254 269 0 82 chr15 103048013 103048098 -446876 + MT2B LTR ERVL 170 247 -354 1 1371 280 316 12 25 chr15 103048123 103048204 -446770 - ID2 SINE ID -2 81 2 1 1371 223 302 50 40 chr15 103048211 103048311 -446663 - PB1D10 SINE Alu -3 114 14 1 1371 3743 45 9 0 chr15 103048377 103048824 -446150 + L1Md_F2 LINE L1 6132 6582 0 1 1371 188 135 0 26 chr15 103048922 103048960 -446014 + CT-rich Low_complexity Low_complexity 4 40 0 1 1371 369 188 238 0 chr15 103048960 103049061 -445913 - B1_Mus2 SINE Alu -12 135 11 1 1371 468 280 24 41 chr15 103049050 103049173 -445801 - B1_Mur1 SINE Alu -27 122 2 1 1371 417 246 34 128 chr15 103049173 103049190 -445784 - MT2B LTR ERVL -314 246 153 1 1371 204 123 68 14 chr15 103049234 103049308 -445666 + (CTATA)n Simple_repeat Simple_repeat 3 80 0 1 1371 333 159 25 82 chr15 103049322 103049480 -445494 + (TA)n Simple_repeat Simple_repeat 1 149 0 1 1371 550 268 25 38 chr15 103049538 103049697 -445277 - RSINE1 SINE B4 -5 160 4 1 1371 621 235 85 57 chr15 103049800 103049976 -444998 + B3A SINE B2 2 182 -16 1 1371 1075 35 26 72 chr15 103050051 103050203 -444771 - B1_Mm SINE Alu -1 146 2 1 1371 880 140 44 0 chr15 103050210 103050346 -444628 - B1_Mur3 SINE Alu -6 143 2 1 1371 541 242 28 70 chr15 103050486 103050628 -444346 + B1_Mur1 SINE Alu 1 136 -13 1 1371 214 29 0 54 chr15 103050628 103050665 -444309 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 1 1371 698 233 129 21 chr15 103050665 103050858 -444116 + B3 SINE B2 2 215 -1 1 1371 416 224 113 60 chr15 103050935 103051068 -443906 + RSINE1 SINE B4 2 141 -24 1 1371 279 0 0 0 chr15 103052096 103052127 -442847 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1371 230 360 23 0 chr15 103052143 103052229 -442745 + B4A SINE B4 82 169 -123 1 1371 238 114 0 0 chr15 103052209 103052244 -442730 + B1_Mus2 SINE Alu 92 126 -21 1 1371 1684 31 0 0 chr15 103052581 103052772 -442202 + B2_Mm1a SINE B2 3 193 0 1 1371 686 189 0 80 chr15 103052794 103052879 -442095 + B1_Mur3 SINE Alu 10 90 -59 1 1371 1144 132 25 35 chr15 103052879 103052911 -442063 - B2_Mm2 SINE B2 0 195 159 1 1371 1044 72 14 0 chr15 103052911 103053050 -441924 - B1_Mm SINE Alu -6 141 1 1 1371 216 0 0 0 chr15 103053054 103053078 -441896 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 1371 1144 132 25 35 chr15 103053078 103053237 -441737 - B2_Mm2 SINE B2 -37 158 1 1 1371 686 189 0 80 chr15 103053237 103053289 -441685 + B1_Mur3 SINE Alu 91 131 -18 1 1371 188 0 74 0 chr15 103053291 103053318 -441656 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 1 1371 302 291 40 71 chr15 103053417 103053451 -441523 - ID_B1 SINE B4 -17 207 86 1 1371 362 292 0 33 chr15 103053451 103053543 -441431 - B1F1 SINE Alu -56 93 5 1 1371 2835 34 33 14 chr15 103054277 103054640 -440334 + L1Md_F3 LINE L1 6215 6584 0 1 1371 738 176 107 24 chr15 103054688 103054857 -440117 - B2_Mm2 SINE B2 -3 192 10 1 1371 1008 54 0 150 chr15 103055032 103055205 -439769 + B1_Mus2 SINE Alu 1 147 0 1 1371 449 34 0 17 chr15 103055206 103055266 -439708 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 1 1371 306 247 158 21 chr15 103055283 103055378 -439596 - PB1D7 SINE Alu 0 120 13 1 1371 305 307 8 34 chr15 103055470 103055588 -439386 - PB1D9 SINE Alu -5 115 1 1 1371 488 143 12 23 chr15 103055654 103055728 -439246 + PB1D9 SINE Alu 36 110 -10 1 1371 198 0 0 0 chr15 103055728 103055750 -439224 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1371 488 143 12 23 chr15 103055750 103055761 -439213 + PB1D9 SINE Alu 111 120 0 1 1371 180 152 0 0 chr15 103055761 103055794 -439180 + GA-rich Low_complexity Low_complexity 3 35 0 1 1371 24 0 0 0 chr15 103055883 103055907 -439067 + AT_rich Low_complexity Low_complexity 1 24 0 1 1371 293 276 0 87 chr15 103056440 103056453 -438521 + MT2B2 LTR ERVL 152 256 -328 1 1371 579 206 10 0 chr15 103056453 103056555 -438419 + B1_Mur2 SINE Alu 1 103 -46 1 1371 1179 55 0 7 chr15 103056636 103056783 -438191 - B1_Mus2 SINE Alu -1 146 1 1 1371 202 146 24 0 chr15 103057832 103057873 -437101 + A-rich Low_complexity Low_complexity 6 47 0 1 1371 259 312 46 113 chr15 103057926 103057994 -436980 + ID_B1 SINE B4 41 222 -2 1 1371 330 250 79 55 chr15 103057994 103058121 -436853 + B1F SINE Alu 18 147 -2 1 1371 672 236 5 126 chr15 103058158 103058381 -436593 + B3 SINE B2 14 209 -7 1 1371 343 307 68 41 chr15 103058427 103058573 -436401 - RSINE1 SINE B4 -4 161 12 1 1371 1696 31 0 0 chr15 103058589 103058782 -436192 + B2_Mm1t SINE B2 1 193 0 1 1371 318 228 152 0 chr15 103059111 103059203 -435771 - PB1D7 SINE Alu -14 106 1 1 1371 337 192 0 82 chr15 103059350 103059435 -435539 - PB1D10 SINE Alu 0 117 40 1 1371 273 274 119 8 chr15 103059560 103059678 -435296 - L1M5 LINE L1 -3273 2873 2743 1 1371 249 293 131 69 chr15 103059698 103059885 -435089 - L1MD LINE L1 -3466 2680 2482 1 1371 332 273 0 0 chr15 103059885 103059962 -435012 - ID4 SINE ID -6 77 1 1 1371 290 268 0 14 chr15 103059962 103060034 -434940 - L1M5 LINE L1 -3671 2475 2405 1 1371 318 106 0 0 chr15 103060986 103061033 -433941 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1 1371 384 274 99 23 chr15 103061033 103061159 -433815 - B1_Mur1 SINE Alu -8 141 5 1 1371 314 169 42 14 chr15 103061202 103061274 -433700 + B1_Mm SINE Alu 65 138 -9 1 1371 261 0 0 0 chr15 103061275 103061304 -433670 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1 1371 1204 54 0 0 chr15 103061382 103061529 -433445 + B1_Mus2 SINE Alu 1 147 0 1 1371 404 256 113 63 chr15 103061540 103061682 -433292 + B1_Mur2 SINE Alu 1 149 0 1 1371 1297 19 0 0 chr15 103061684 103061843 -433131 + B2_Mm1a SINE B2 2 160 -33 1 1371 306 0 0 0 chr15 103061843 103061877 -433097 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1 1371 758 182 21 7 chr15 103061934 103062078 -432896 + B1_Mur4 SINE Alu 3 148 -2 1 1371 264 161 0 0 chr15 103062082 103062144 -432830 + (CAGAGA)n Simple_repeat Simple_repeat 1 62 0 1 1371 540 267 30 0 chr15 103062196 103062327 -432647 + B3 SINE B2 82 216 0 1 1371 23 33 0 0 chr15 103062395 103062425 -432549 + AT_rich Low_complexity Low_complexity 1 30 0 1 1371 368 238 93 28 chr15 103062957 103063065 -431909 - PB1D10 SINE Alu -1 116 2 1 1371 267 246 0 42 chr15 103063074 103063146 -431828 - PB1D10 SINE Alu 0 117 49 1 1371 672 250 7 0 chr15 103063156 103063296 -431678 - B1_Mur2 SINE Alu -8 141 1 1 1371 347 190 23 102 chr15 103063304 103063392 -431582 - PB1D9 SINE Alu -5 115 35 1 1371 633 158 0 77 chr15 103063467 103063597 -431377 + PB1D9 SINE Alu 1 120 0 1 1371 708 293 36 98 chr15 103063877 103064070 -430904 - B3A SINE B2 -6 189 9 1 1371 717 85 169 0 chr15 103064227 103064345 -430629 + B1_Mus1 SINE Alu 11 148 0 1 1371 180 125 0 0 chr15 103064346 103064378 -430596 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1371 786 132 5 0 chr15 103064384 103064526 -430448 + B1_Mus2 SINE Alu 1 148 0 1 1371 1183 48 7 0 chr15 103064593 103064738 -430236 - B1_Mus2 SINE Alu -1 146 1 1 1371 639 100 20 0 chr15 103064920 103065020 -429954 - B1_Mus2 SINE Alu -5 142 41 1 1371 512 196 0 0 chr15 103065042 103065139 -429835 - B1_Mm SINE Alu -6 141 45 1 1371 1015 58 51 0 chr15 103065260 103065398 -429576 - B1_Mus2 SINE Alu -1 146 2 1 1371 392 212 241 8 chr15 103065450 103065583 -429391 - B3 SINE B2 -28 188 25 2 1371 585 0 0 0 chr15 103065727 103065792 -429182 + (TTC)n Simple_repeat Simple_repeat 2 66 0 2 1371 775 168 7 14 chr15 103065806 103065945 -429029 - B1_Mus1 SINE Alu -8 140 3 2 1371 1092 64 35 0 chr15 103066011 103066152 -428822 + B1_Mm SINE Alu 2 147 0 2 1371 487 291 89 6 chr15 103066251 103066431 -428543 - ID_B1 SINE B4 -9 215 21 2 1371 487 234 48 28 chr15 103066553 103066698 -428276 + B1F SINE Alu 1 148 -1 2 1371 1152 134 37 5 chr15 103066748 103066936 -428038 + B2_Mm2 SINE B2 2 195 0 2 1371 639 55 339 0 chr15 103066956 103067065 -427909 + B1_Mm SINE Alu 2 147 0 2 1371 728 206 7 33 chr15 103067124 103067275 -427699 + B1_Mur3 SINE Alu 3 149 0 2 1371 452 121 12 0 chr15 103067753 103067836 -427138 + L1Md_F2 LINE L1 6499 6582 0 2 1371 255 232 9 112 chr15 103067867 103067974 -427000 + MT2B LTR ERVL 156 251 -350 2 1371 537 165 122 16 chr15 103067887 103068010 -426964 + B1_Mus2 SINE Alu 12 147 0 2 1371 1130 88 0 0 chr15 103068192 103068339 -426635 + B1_Mus1 SINE Alu 2 148 0 2 1371 192 111 0 0 chr15 103068339 103068375 -426599 + (A)n Simple_repeat Simple_repeat 1 36 0 2 1371 1113 44 0 7 chr15 103068491 103068627 -426347 - B1_Mus2 SINE Alu -11 136 2 2 1371 454 164 156 52 chr15 103068673 103068808 -426166 - B1_Mur2 SINE Alu 0 149 1 2 1371 1061 86 0 7 chr15 103072111 103072252 -422722 + B1_Mus2 SINE Alu 3 142 -5 2 1371 216 333 0 0 chr15 103073073 103073151 -421823 + (TGG)n Simple_repeat Simple_repeat 2 79 0 2 1371 21 0 0 0 chr15 103075003 103075024 -419950 + AT_rich Low_complexity Low_complexity 1 21 0 2 1371 23 33 0 0 chr15 103077093 103077123 -417851 + AT_rich Low_complexity Low_complexity 1 30 0 2 1371 837 81 78 42 chr15 103077576 103077718 -417256 - B1_Mm SINE Alu 0 147 1 2 1371 246 253 95 42 chr15 103077943 103078038 -416936 + PB1D9 SINE Alu 12 111 -9 2 1371 1059 103 0 14 chr15 103078050 103078198 -416776 + B1_Mus2 SINE Alu 2 147 0 2 1371 479 256 108 0 chr15 103079923 103080052 -414922 + B1_Mus1 SINE Alu 5 147 -1 2 1371 746 181 15 8 chr15 103080058 103080192 -414782 + B1_Mus2 SINE Alu 1 135 -12 2 1371 1164 43 0 28 chr15 103080193 103080337 -414637 + B1_Mus2 SINE Alu 3 142 -5 2 1371 1256 28 11 33 chr15 103080337 103080520 -414454 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 2 1371 207 154 51 0 chr15 103080532 103080571 -414403 + GA-rich Low_complexity Low_complexity 4 44 0 2 1371 904 138 0 27 chr15 103081916 103082065 -412909 - B1_Mur2 SINE Alu -2 147 3 2 1371 351 312 50 14 chr15 103082684 103082824 -412150 + MIR3 SINE MIR 47 191 -17 2 1371 207 0 0 0 chr15 103083930 103083953 -411021 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1371 259 250 0 0 chr15 103084376 103084432 -410542 - ID4_ SINE ID -23 60 5 2 1371 390 42 0 0 chr15 103086336 103086384 -408590 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 2 1371 453 277 51 7 chr15 103086748 103086886 -408088 + ID_B1 SINE B4 80 223 -1 2 1371 496 276 0 76 chr15 103087582 103087739 -407235 + B1F SINE Alu 5 149 0 2 1371 291 265 147 0 chr15 103087738 103087814 -407160 + B1_Mur2 SINE Alu 33 121 -28 2 1371 447 19 0 0 chr15 103087814 103087866 -407108 + (CATA)n Simple_repeat Simple_repeat 1 52 0 2 1371 291 265 147 0 chr15 103087866 103087891 -407083 + B1_Mur2 SINE Alu 122 148 -1 2 1371 354 105 0 2 chr15 103089434 103089491 -405483 + B1_Mur4 SINE Alu 2 57 -92 2 1371 206 119 48 0 chr15 103089603 103089645 -405329 + CT-rich Low_complexity Low_complexity 4 47 0 2 1371 529 240 32 0 chr15 103089694 103089819 -405155 - B1F SINE Alu -20 129 1 2 1371 217 236 68 27 chr15 103089926 103090000 -404974 + MIRc SINE MIR 82 158 -110 2 1371 1198 48 0 0 chr15 103090014 103090161 -404813 + B1_Mus2 SINE Alu 1 147 0 2 1371 341 265 0 6 chr15 103090227 103090324 -404650 + ID4 SINE ID 12 106 -46 2 1371 312 250 56 0 chr15 103090320 103090392 -404582 + MTEa LTR MaLR 193 268 -111 2 1371 25 31 0 0 chr15 103090392 103090424 -404550 + AT_rich Low_complexity Low_complexity 1 32 0 2 1371 388 279 128 7 chr15 103090927 103091075 -403899 + MIRc SINE MIR 45 210 -58 2 1371 537 94 0 0 chr15 103091248 103091333 -403641 + (TC)n Simple_repeat Simple_repeat 2 86 0 2 1371 195 42 0 0 chr15 103091424 103091448 -403526 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 1371 397 279 44 75 chr15 103091448 103091607 -403367 - B3A SINE B2 -13 203 50 2 1371 180 0 0 0 chr15 103091611 103091631 -403343 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2 1371 634 203 17 0 chr15 103091635 103091753 -403221 - PB1D9 SINE Alu 0 120 1 2 1371 229 267 17 0 chr15 103091757 103091817 -403157 - B2_Mm2 SINE B2 -134 61 1 2 1371 198 0 0 0 chr15 103091890 103091912 -403062 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 1371 378 0 0 0 chr15 103091925 103091967 -403007 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2 1371 1173 69 0 0 chr15 103091967 103092111 -402863 - B1_Mus2 SINE Alu -3 144 1 2 1371 1242 54 0 0 chr15 103092232 103092379 -402595 + B1_Mus1 SINE Alu 2 148 0 2 1371 885 175 7 7 chr15 103093340 103093477 -401497 + B1_Mur4 SINE Alu 3 140 -10 2 1371 240 59 0 0 chr15 103093477 103093511 -401463 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1371 277 249 102 27 chr15 103093545 103093643 -401331 + PB1 SINE Alu 23 123 -4 2 1371 587 167 134 8 chr15 103093744 103093871 -401103 + B1_Mur1 SINE Alu 3 145 -4 2 1371 611 119 24 8 chr15 103093881 103094008 -400966 + (TG)n Simple_repeat Simple_repeat 1 129 0 2 1371 261 254 83 0 chr15 103094016 103094098 -400876 - B3A SINE B2 -11 205 112 2 1371 1068 85 43 0 chr15 103094164 103094305 -400669 - B1_Mus1 SINE Alu 0 148 2 2 1371 742 208 71 44 chr15 103094311 103094563 -400411 + L1M4 LINE L1 5276 5534 -640 2 1371 229 209 6 22 chr15 103094598 103094651 -400323 + B1_Mus2 SINE Alu 66 119 -28 2 1371 515 161 35 35 chr15 103094656 103094778 -400196 - RLTR13C2 LTR ERVK 0 808 695 2 1371 413 77 31 0 chr15 103094784 103094849 -400125 + (CATA)n Simple_repeat Simple_repeat 2 68 0 2 1371 734 245 66 30 chr15 103094851 103095049 -399925 + B3 SINE B2 1 205 -11 2 1371 358 218 34 22 chr15 103095270 103095359 -399615 + L1M4 LINE L1 5674 5763 -411 2 1371 217 211 0 0 chr15 103095362 103095400 -399574 - B3A SINE B2 -132 66 29 2 1371 627 144 165 16 chr15 103095400 103095527 -399447 + B1_Mm SINE Alu 1 146 -1 2 1371 295 136 0 0 chr15 103095543 103095587 -399387 - B3A SINE B2 -154 44 1 2 1371 1146 230 89 3 chr15 103095587 103095877 -399097 + MTD LTR MaLR 105 419 0 2 1371 462 288 78 14 chr15 103095941 103096082 -398892 + RSINE1 SINE B4 4 153 -12 2 1371 324 0 0 0 chr15 103096084 103096120 -398854 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1371 267 173 0 0 chr15 103096132 103096184 -398790 + T-rich Low_complexity Low_complexity 1 52 0 2 1371 1226 54 0 0 chr15 103096184 103096331 -398643 - B1_Mm SINE Alu 0 147 1 2 1371 1370 80 32 0 chr15 103096331 103096519 -398455 - B2_Mm2 SINE B2 0 195 2 2 1371 356 220 115 33 chr15 103096585 103096707 -398267 + L1MB7 LINE L1 6025 6156 -24 2 1371 512 210 327 13 chr15 103096714 103096873 -398101 - B3 SINE B2 -1 215 7 2 1371 1503 58 11 0 chr15 103096976 103097166 -397808 + B2_Mm1a SINE B2 2 193 0 2 1371 707 43 0 0 chr15 103097166 103097260 -397714 + B1_Mm SINE Alu 1 94 -53 2 1371 230 226 0 36 chr15 103097211 103097266 -397708 + RLTR25A LTR ERVK 522 574 -529 2 1371 447 19 0 0 chr15 103097292 103097344 -397630 + (GAAA)n Simple_repeat Simple_repeat 2 53 0 2 1371 269 246 0 0 chr15 103097345 103097406 -397568 - B3 SINE B2 -154 62 2 2 1371 1029 121 68 17 chr15 103097436 103097612 -397362 + Lx9 LINE L1 7307 7491 -153 2 1371 212 94 0 0 chr15 103097677 103097709 -397265 + B3A SINE B2 1 32 -166 2 1371 1131 90 0 0 chr15 103097717 103097862 -397112 + B1_Mus1 SINE Alu 2 146 -2 2 1371 316 187 21 52 chr15 103097864 103097960 -397014 + Lx9 LINE L1 7552 7644 0 2 1371 774 141 0 43 chr15 103097974 103098115 -396859 - ID_B1 SINE B4 -7 217 83 2 1371 366 23 0 0 chr15 103098181 103098224 -396750 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1371 264 83 0 0 chr15 103098224 103098260 -396714 - PB1D9 SINE Alu -83 37 2 2 1371 220 180 0 167 chr15 103098260 103098284 -396690 - B4 SINE B4 -170 122 73 2 1371 1119 101 0 0 chr15 103098403 103098551 -396423 + B1_Mus1 SINE Alu 1 148 0 2 1371 1137 88 7 0 chr15 103098601 103098748 -396226 + B1_Mus1 SINE Alu 1 148 0 2 1371 777 193 0 43 chr15 103098785 103098926 -396048 + B1_Mur2 SINE Alu 3 137 -12 2 1371 279 0 0 0 chr15 103098935 103098966 -396008 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1371 540 45 0 0 chr15 103098966 103099032 -395942 + (GA)n Simple_repeat Simple_repeat 1 67 0 2 1371 400 235 50 20 chr15 103099041 103099141 -395833 - RSINE1 SINE B4 -61 104 2 2 1371 840 200 0 0 chr15 103099167 103099342 -395632 + CT-rich Low_complexity Low_complexity 4 178 0 2 1371 682 229 0 0 chr15 103099347 103099469 -395505 - B1_Mur2 SINE Alu -14 135 14 2 1371 406 301 22 22 chr15 103099516 103099652 -395322 + ID_B1 SINE B4 88 223 -1 2 1371 200 255 36 18 chr15 103099822 103099878 -395096 + MIRb SINE MIR 113 169 -99 2 1371 251 93 23 0 chr15 103099918 103099961 -395013 + (TTTTC)n Simple_repeat Simple_repeat 2 45 0 2 1371 435 262 73 16 chr15 103100074 103100198 -394776 - B1F2 SINE Alu -17 132 2 3 1371 604 289 100 30 chr15 103100207 103100407 -394567 - ID_B1 SINE B4 -1 223 10 3 1371 1221 42 0 0 chr15 103100481 103100625 -394349 - B1_Mus1 SINE Alu 0 148 5 3 1371 316 267 0 0 chr15 103100628 103100688 -394286 - PB1 SINE Alu -33 94 35 3 1371 487 236 28 0 chr15 103100801 103100907 -394067 + PB1D7 SINE Alu 10 118 -2 3 1371 295 289 25 139 chr15 103100909 103100993 -393981 + Lx8 LINE L1 7264 7347 -126 3 1371 789 177 64 0 chr15 103100993 103101134 -393840 + B1_Mur4 SINE Alu 1 150 0 3 1371 295 289 25 139 chr15 103101134 103101162 -393812 + Lx8 LINE L1 7348 7355 -118 3 1371 1227 41 0 0 chr15 103101162 103101308 -393666 + B1_Mus2 SINE Alu 2 147 0 3 1371 278 26 0 25 chr15 103101313 103101353 -393621 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1371 295 289 25 139 chr15 103101353 103101470 -393504 + Lx8 LINE L1 7357 7473 0 3 1371 866 210 6 11 chr15 103101620 103101798 -393176 + B3 SINE B2 1 177 -39 3 1371 1000 144 0 65 chr15 103101803 103101988 -392986 - MTC LTR MaLR -8 413 241 3 1371 577 145 42 25 chr15 103101991 103102111 -392863 - RMER12 LTR ERVK -4 1318 1197 3 1371 214 194 0 226 chr15 103102275 103102324 -392650 - B2_Mm2 SINE B2 -123 72 39 3 1371 1123 76 0 27 chr15 103102324 103102472 -392502 - B1_Mus1 SINE Alu 0 148 5 3 1371 214 194 0 226 chr15 103102472 103102515 -392459 - B2_Mm2 SINE B2 -157 38 1 3 1371 25 51 0 0 chr15 103102520 103102559 -392415 + AT_rich Low_complexity Low_complexity 1 39 0 3 1371 1317 88 16 21 chr15 103102568 103102755 -392219 + B2_Mm2 SINE B2 2 187 -8 3 1371 503 268 0 48 chr15 103104353 103104498 -390476 - B1_Mur2 SINE Alu -6 143 6 3 1371 257 329 0 0 chr15 103104599 103104669 -390305 - B4A SINE B4 -221 71 2 3 1371 559 207 54 0 chr15 103104864 103104975 -389999 + PB1D7 SINE Alu 4 120 0 3 1371 211 176 39 0 chr15 103105445 103105496 -389478 - PB1D9 SINE Alu 0 120 68 3 1371 284 338 37 81 chr15 103105609 103105770 -389204 + B4A SINE B4 71 224 -68 3 1371 626 221 7 14 chr15 103105633 103105771 -389203 + B1_Mur2 SINE Alu 12 148 -1 3 1371 236 275 83 45 chr15 103105847 103106003 -388971 + MurSatRep1 Unknown Unknown 98 259 -1878 3 1371 537 58 0 0 chr15 103106021 103106090 -388884 + (CCA)n Simple_repeat Simple_repeat 1 69 0 3 1371 556 195 0 96 chr15 103106102 103106130 -388844 - PB1D9 SINE Alu -6 114 94 3 1371 1326 90 20 41 chr15 103106130 103106327 -388647 - B2_Mm2 SINE B2 -1 194 2 3 1371 556 195 0 96 chr15 103106327 103106423 -388551 - PB1D9 SINE Alu -27 93 2 3 1371 234 0 0 0 chr15 103106424 103106450 -388524 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1371 1386 101 5 21 chr15 103106466 103106659 -388315 - B2_Mm1t SINE B2 -3 190 1 3 1371 1628 42 0 0 chr15 103106678 103106871 -388103 - B2_Mm1a SINE B2 0 193 1 3 1371 321 258 28 47 chr15 103106893 103106999 -387975 - PB1D7 SINE Alu -7 113 10 3 1371 569 252 75 0 chr15 103107033 103107180 -387794 - B3A SINE B2 0 198 41 3 1371 344 175 16 0 chr15 103107177 103107240 -387734 + PB1D10 SINE Alu 48 111 -6 3 1371 583 183 163 49 chr15 103107597 103107781 -387193 + B3 SINE B2 1 205 -11 3 1371 21 0 0 0 chr15 103108891 103108912 -386062 + AT_rich Low_complexity Low_complexity 1 21 0 3 1371 584 243 190 6 chr15 103109528 103109702 -385272 + ID_B1 SINE B4 1 206 -18 3 1371 456 67 0 0 chr15 103109707 103109767 -385207 + (TAAA)n Simple_repeat Simple_repeat 3 62 0 3 1371 349 292 31 10 chr15 103109894 103109991 -384983 - PB1D10 SINE Alu -17 100 2 3 1371 325 269 17 92 chr15 103110134 103110253 -384721 + PB1D9 SINE Alu 10 119 -1 3 1371 866 105 179 36 chr15 103110275 103110443 -384531 + B2_Mm2 SINE B2 4 195 0 3 1371 406 266 55 9 chr15 103110487 103110597 -384377 + PB1D10 SINE Alu 1 115 -2 3 1371 447 167 18 73 chr15 103110909 103110923 -384051 + MT2B LTR ERVL 154 161 -440 3 1371 790 127 56 0 chr15 103110923 103111049 -383925 + B1_Mus1 SINE Alu 1 133 -15 3 1371 267 31 0 0 chr15 103111123 103111155 -383819 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 3 1371 445 234 9 34 chr15 103111161 103111270 -383704 + B3A SINE B2 1 110 -85 3 1371 739 216 7 0 chr15 103111578 103111726 -383248 - B1_Mur1 SINE Alu 0 149 1 3 1371 22 0 0 0 chr15 103111858 103111880 -383094 + AT_rich Low_complexity Low_complexity 1 22 0 3 1371 294 253 0 71 chr15 103112114 103112199 -382775 - B4 SINE B4 0 292 214 3 1371 548 160 113 0 chr15 103112225 103112331 -382643 - B1_Mur3 SINE Alu -2 147 30 3 1371 647 318 61 5 chr15 103112465 103112677 -382297 - ID_B1 SINE B4 0 224 1 3 1371 643 240 0 0 chr15 103112798 103112919 -382055 - B1_Mur1 SINE Alu -4 145 25 3 1371 2454 39 36 0 chr15 103112925 103113233 -381741 + L1Md_F3 LINE L1 6266 6584 0 3 1371 1286 27 0 0 chr15 103113252 103113398 -381576 + B1_Mm SINE Alu 1 146 -1 3 1371 216 0 0 0 chr15 103113405 103113429 -381545 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1371 963 212 16 26 chr15 103113487 103113676 -381298 - B3A SINE B2 -10 188 2 3 1371 22 0 0 0 chr15 103113890 103113912 -381062 + AT_rich Low_complexity Low_complexity 1 22 0 3 1371 594 165 115 23 chr15 103113986 103114116 -380858 - B1F1 SINE Alu 0 149 8 3 1371 1377 70 16 5 chr15 103114149 103114337 -380637 - B2_Mm1a SINE B2 -1 192 3 3 1371 315 71 0 0 chr15 103114495 103114537 -380437 + (CATG)n Simple_repeat Simple_repeat 1 42 0 3 1371 24 0 0 0 chr15 103114539 103114563 -380411 + AT_rich Low_complexity Low_complexity 1 24 0 3 1371 780 210 181 6 chr15 103114566 103114743 -380231 - B3 SINE B2 0 216 9 3 1371 483 217 139 0 chr15 103114946 103115061 -379913 - ID_B1 SINE B4 -4 220 90 3 1371 258 284 74 0 chr15 103116948 103117029 -377945 - L2a LINE L2 -9 3417 3331 3 1371 1198 62 14 0 chr15 103117268 103117414 -377560 - B1_Mus1 SINE Alu 0 148 1 3 1371 589 175 84 15 chr15 103117453 103117574 -377400 - B1_Mm SINE Alu 0 147 22 3 1371 226 204 40 20 chr15 103117607 103117648 -377326 + B3 SINE B2 2 43 -173 3 1371 497 224 21 126 chr15 103117648 103117791 -377183 + B1_Mur4 SINE Alu 2 129 -21 3 1371 534 228 88 16 chr15 103117808 103117869 -377105 + B1_Mur2 SINE Alu 1 71 -78 3 1371 182 37 0 36 chr15 103117869 103117897 -377077 + (AGTTG)n Simple_repeat Simple_repeat 2 28 0 3 1371 534 228 88 16 chr15 103117897 103117960 -377014 + B1_Mur2 SINE Alu 72 134 -15 3 1371 188 34 0 33 chr15 103117962 103117992 -376982 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 3 1371 841 195 75 6 chr15 103118021 103118181 -376793 + B3 SINE B2 32 202 -14 3 1371 218 164 153 141 chr15 103118198 103118259 -376715 + PB1D9 SINE Alu 35 106 -14 3 1371 621 0 0 0 chr15 103118259 103118328 -376646 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 3 1371 218 164 153 141 chr15 103118328 103118351 -376623 + PB1D9 SINE Alu 107 120 0 3 1371 563 189 135 8 chr15 103120355 103120488 -374486 + B1_Mur4 SINE Alu 1 150 0 3 1371 310 232 0 0 chr15 103120785 103120841 -374133 - RSINE1 SINE B4 -43 122 67 3 1371 546 91 0 0 chr15 103120867 103120944 -374030 + (TCCC)n Simple_repeat Simple_repeat 1 77 0 3 1371 301 250 148 50 chr15 103122064 103122165 -372809 - PB1D7 SINE Alu 0 120 10 3 1371 596 198 34 17 chr15 103122249 103122367 -372607 - PB1D7 SINE Alu 0 120 1 3 1371 217 220 0 0 chr15 103122394 103122444 -372530 + G-rich Low_complexity Low_complexity 4 53 0 3 1371 836 190 0 0 chr15 103122448 103122585 -372389 - B1_Mur4 SINE Alu -13 137 1 3 1371 207 0 0 0 chr15 103122594 103122617 -372357 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 3 1371 1134 65 0 0 chr15 103122617 103122755 -372219 - B1_Mus2 SINE Alu -9 138 1 3 1371 735 192 58 11 chr15 103122758 103122934 -372040 - B3 SINE B2 0 195 1 3 1371 270 308 109 51 chr15 103123205 103123342 -371632 - MIRb SINE MIR -21 247 103 3 1371 193 299 141 13 chr15 103123387 103123465 -371509 - MIRm SINE MIR -160 116 29 3 1371 867 172 14 7 chr15 103123564 103123710 -371264 - B1_Mur3 SINE Alu -2 147 1 3 1371 243 0 0 0 chr15 103123808 103123835 -371139 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1371 984 233 24 10 chr15 103123877 103124085 -370889 + B3 SINE B2 1 211 -5 3 1371 524 312 0 21 chr15 103124114 103124255 -370719 + ID_B1 SINE B4 87 224 0 3 1371 715 279 15 40 chr15 103124261 103124459 -370515 + B3A SINE B2 6 198 0 3 1371 1356 85 21 5 chr15 103124549 103124738 -370236 + B2_Mm1a SINE B2 1 192 -1 3 1371 1446 34 79 0 chr15 103124738 103124897 -370077 + B2_Mm1a SINE B2 2 160 -33 3 1371 315 0 0 0 chr15 103124897 103124932 -370042 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 3 1371 1446 34 79 0 chr15 103124932 103124950 -370024 + B2_Mm1a SINE B2 161 191 -2 3 1371 693 36 0 0 chr15 103125563 103125647 -369327 + (GAAA)n Simple_repeat Simple_repeat 3 86 0 3 1371 294 278 55 11 chr15 103125842 103125933 -369041 - B1F SINE Alu -34 115 21 3 1371 180 0 0 0 chr15 103126714 103126734 -368240 + (CAG)n Simple_repeat Simple_repeat 1 20 0 3 1371 513 115 0 0 chr15 103131882 103131960 -363014 + (TC)n Simple_repeat Simple_repeat 1 78 0 3 1371 239 211 32 43 chr15 103135890 103135984 -358990 + (CGGG)n Simple_repeat Simple_repeat 4 96 0 3 1371 262 306 111 0 chr15 103136567 103136675 -358299 + MIR SINE MIR 31 150 -112 3 1371 1219 55 0 0 chr15 103137040 103137186 -357788 - B1_Mus1 SINE Alu -1 147 2 3 1371 302 270 14 54 chr15 103137397 103137520 -357454 + PB1D10 SINE Alu 7 120 0 3 1371 310 211 89 59 chr15 103138081 103138182 -356792 + PB1D10 SINE Alu 14 117 0 3 1371 739 307 77 21 chr15 103138372 103138605 -356369 + B4A SINE B4 1 246 -46 4 1371 315 0 0 0 chr15 103138605 103138640 -356334 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1371 265 220 0 35 chr15 103140450 103140535 -354439 + CT-rich Low_complexity Low_complexity 3 84 0 4 1371 239 159 38 49 chr15 103140535 103140596 -354378 - PB1D10 SINE Alu -40 109 47 4 1371 414 0 0 0 chr15 103140683 103140729 -354245 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1371 412 317 0 0 chr15 103141165 103141285 -353689 - PB1D7 SINE Alu 0 120 1 4 1371 283 369 68 0 chr15 103141492 103141595 -353379 + RSINE1 SINE B4 56 165 0 4 1371 1704 16 0 0 chr15 103141626 103141813 -353161 + B2_Mm1a SINE B2 2 188 -5 4 1371 1522 63 16 0 chr15 103141817 103142007 -352967 + B2_Mm2 SINE B2 1 193 -2 4 1371 697 178 0 17 chr15 103142007 103142127 -352847 - B1_Mur1 SINE Alu -10 139 22 4 1371 227 237 0 78 chr15 103142186 103142250 -352724 + B1F SINE Alu 89 147 -2 4 1371 886 222 25 104 chr15 103142258 103142499 -352475 + ID_B1 SINE B4 3 224 0 4 1371 686 257 0 7 chr15 103142504 103142649 -352325 + B1_Mus2 SINE Alu 3 146 -1 4 1371 271 258 183 0 chr15 103142680 103142773 -352201 + PB1D9 SINE Alu 1 110 -10 4 1371 183 80 0 0 chr15 103142773 103142798 -352176 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 1371 725 236 131 6 chr15 103143202 103143377 -351597 - B3 SINE B2 -18 198 2 4 1371 249 213 38 0 chr15 103143831 103143919 -351055 - MIRc SINE MIR -27 181 91 4 1371 360 0 0 0 chr15 103147610 103147650 -347324 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1371 326 331 57 7 chr15 103149912 103150052 -344922 + B1F SINE Alu 3 149 0 4 1371 359 189 13 64 chr15 103150064 103150168 -344806 + B1_Mur2 SINE Alu 49 149 0 4 1371 252 116 0 0 chr15 103150168 103150177 -344797 + (A)n Simple_repeat Simple_repeat 1 9 0 4 1371 1275 41 0 0 chr15 103150177 103150324 -344650 + B1_Mus2 SINE Alu 1 147 0 4 1371 252 116 0 0 chr15 103150324 103150357 -344617 + (A)n Simple_repeat Simple_repeat 1 33 0 4 1371 938 138 0 0 chr15 103150367 103150505 -344469 + B1_Mus1 SINE Alu 11 148 0 4 1371 245 293 198 20 chr15 103151004 103151105 -343869 - MIR3 SINE MIR -27 181 63 4 1372 212 241 17 17 chr15 103154019 103154078 -340896 + G-rich Low_complexity Low_complexity 2 60 0 4 1372 943 259 12 36 chr15 103154934 103155182 -339792 - MIRb SINE MIR -11 257 16 4 1372 261 343 102 81 chr15 103155432 103155521 -339453 - MIR SINE MIR -20 242 144 4 1372 527 225 36 0 chr15 103155521 103155632 -339342 - PB1D10 SINE Alu -1 116 2 4 1372 262 343 102 81 chr15 103155632 103155777 -339197 - MIRb SINE MIR -114 154 3 4 1372 284 254 68 40 chr15 103155826 103155900 -339074 - ID4_ SINE ID -3 80 5 4 1372 378 238 28 6 chr15 103155909 103156014 -338960 - B1F SINE Alu -6 141 41 4 1372 396 0 0 0 chr15 103156055 103156099 -338875 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1372 533 324 12 123 chr15 103156099 103156261 -338713 + RSINE1 SINE B4 12 155 -10 4 1372 543 233 28 33 chr15 103156299 103156431 -338543 + B1_Mur4 SINE Alu 1 136 -14 4 1372 327 130 0 0 chr15 103156431 103156485 -338489 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 4 1372 543 230 29 36 chr15 103156485 103156502 -338472 + B1_Mur4 SINE Alu 137 150 0 4 1372 564 248 18 0 chr15 103156511 103156624 -338350 + PB1D7 SINE Alu 6 120 0 4 1372 469 250 56 0 chr15 103156662 103156770 -338204 + B1_Mur4 SINE Alu 37 150 0 4 1372 550 155 102 10 chr15 103156773 103156871 -338103 + PB1D9 SINE Alu 2 108 -12 4 1372 475 331 15 8 chr15 103156900 103157031 -337943 + RSINE1 SINE B4 3 134 -31 4 1372 426 299 117 120 chr15 103157112 103157246 -337728 + MER2 DNA MER2_type 2 106 -239 4 1372 234 0 0 0 chr15 103157246 103157272 -337702 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 1372 798 269 0 0 chr15 103157280 103157436 -337538 - RSINE1 SINE B4 -8 157 2 4 1372 426 299 117 120 chr15 103157436 103157634 -337340 + MER2 DNA MER2_type 109 342 -3 4 1372 421 309 57 7 chr15 103157657 103157797 -337177 + RSINE1 SINE B4 13 159 -6 4 1372 785 235 95 11 chr15 103157824 103158013 -336961 - B3 SINE B2 -10 206 2 4 1372 291 21 41 20 chr15 103158032 103158081 -336893 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 4 1372 773 221 0 0 chr15 103158090 103158226 -336748 + B1_Mur1 SINE Alu 1 136 -13 4 1372 226 0 29 29 chr15 103158227 103158262 -336712 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1372 624 308 55 6 chr15 103158279 103158462 -336512 + B3A SINE B2 3 194 -4 4 1372 550 200 10 0 chr15 103158665 103158765 -336209 - RSINE1 SINE B4 -57 108 8 4 1372 279 221 23 200 chr15 103158782 103158912 -336062 - PB1D10 SINE Alu -5 112 6 4 1372 248 217 66 92 chr15 103159015 103159091 -335883 - B3A SINE B2 -118 80 7 4 1372 339 262 45 27 chr15 103159104 103159214 -335760 - PB1D10 SINE Alu -5 112 1 4 1372 23 33 0 0 chr15 103159215 103159245 -335729 + AT_rich Low_complexity Low_complexity 1 30 0 4 1372 332 313 171 69 chr15 103159307 103159482 -335492 + B3A SINE B2 4 196 -2 4 1372 995 144 14 0 chr15 103159492 103159638 -335336 + B1_Mur4 SINE Alu 1 148 -2 4 1372 1214 106 67 0 chr15 103159642 103159822 -335152 + B2_Mm2 SINE B2 1 192 -3 4 1372 180 0 0 0 chr15 103159841 103159861 -335113 + (CAAA)n Simple_repeat Simple_repeat 4 23 0 4 1372 556 260 50 31 chr15 103159986 103160145 -334829 + RSINE1 SINE B4 3 164 -1 4 1372 215 298 0 66 chr15 103160186 103160247 -334727 + B1F2 SINE Alu 1 57 -92 4 1372 923 204 68 19 chr15 103160571 103160588 -334386 - B3 SINE B2 0 216 203 4 1372 886 189 0 20 chr15 103160588 103160739 -334235 - B1_Mur2 SINE Alu -1 148 1 4 1372 923 204 68 19 chr15 103160739 103160926 -334048 - B3 SINE B2 -14 202 2 4 1372 345 277 53 11 chr15 103160965 103161060 -333914 + B4A SINE B4 92 190 -102 4 1372 202 118 0 29 chr15 103161068 103161103 -333871 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1372 234 0 0 0 chr15 103161366 103161392 -333582 + (TTA)n Simple_repeat Simple_repeat 2 27 0 4 1372 1700 21 0 0 chr15 103161421 103161608 -333366 - B2_Mm1t SINE B2 -6 187 1 4 1372 252 0 0 0 chr15 103161608 103161636 -333338 + (TTA)n Simple_repeat Simple_repeat 2 29 0 4 1372 1208 48 0 7 chr15 103161636 103161782 -333192 - B1_Mm SINE Alu -2 145 1 4 1372 308 298 0 21 chr15 103161784 103161880 -333094 - BC1_Mm scRNA scRNA -50 102 9 4 1372 408 210 25 0 chr15 103161806 103161887 -333087 - ID SINE ID -141 83 1 4 1372 537 259 36 0 chr15 103161896 103162008 -332966 - ID_B1 SINE B4 -4 220 105 4 1372 211 218 200 25 chr15 103162066 103162146 -332828 + L2a LINE L2 3287 3380 -46 4 1372 226 271 3 49 chr15 103162155 103162240 -332734 + MIRb SINE MIR 112 200 -68 4 1372 637 284 18 40 chr15 103162331 103162520 -332454 - ID_B1 SINE B4 -88 204 11 4 1372 295 235 198 30 chr15 103163012 103163113 -331861 + RSINE1 SINE B4 44 161 -4 4 1372 351 0 0 0 chr15 103165118 103165157 -329817 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1372 815 132 6 0 chr15 103165157 103165331 -329643 + (GA)n Simple_repeat Simple_repeat 2 176 0 4 1372 433 362 39 22 chr15 103165830 103166069 -328905 - MIRc SINE MIR -33 243 10 4 1372 261 185 0 0 chr15 103166447 103166501 -328473 + ID4 SINE ID 2 55 -28 4 1372 627 51 0 0 chr15 103166607 103166686 -328288 + (TTCC)n Simple_repeat Simple_repeat 2 80 0 4 1372 313 185 0 110 chr15 103166691 103166764 -328210 - B1_Mur2 SINE Alu -29 120 56 4 1372 1000 215 5 14 chr15 103166811 103167023 -327951 - B3 SINE B2 -6 210 1 4 1372 422 328 103 0 chr15 103167072 103167246 -327728 + MIRb SINE MIR 69 260 -8 4 1372 269 130 0 61 chr15 103167209 103167258 -327716 + L2c LINE L2 3342 3387 0 4 1372 368 210 202 0 chr15 103168537 103168661 -326313 - B1F SINE Alu 0 149 1 4 1372 221 197 0 47 chr15 103170550 103170614 -324360 + (CGGGG)n Simple_repeat Simple_repeat 5 65 0 4 1372 303 261 121 21 chr15 103173193 103173334 -321640 + MIRb SINE MIR 26 180 -88 4 1372 385 282 134 78 chr15 103173352 103173583 -321391 + B4 SINE B4 49 292 0 4 1372 235 267 0 0 chr15 103173683 103173728 -321246 + RSINE1 SINE B4 22 66 -99 4 1372 189 0 0 0 chr15 103173751 103173772 -321202 + (C)n Simple_repeat Simple_repeat 1 21 0 4 1372 743 138 22 30 chr15 103173773 103173907 -321067 - B1_Mur3 SINE Alu -6 143 11 4 1372 322 315 34 0 chr15 103173922 103174011 -320963 + RSINE1 SINE B4 72 163 -2 4 1372 765 172 15 0 chr15 103174250 103174384 -320590 - B1_Mus1 SINE Alu -1 147 12 4 1372 597 175 31 62 chr15 103174425 103174553 -320421 - ID_B1 SINE B4 -19 205 82 4 1372 329 345 112 24 chr15 103176643 103176812 -318162 + L2c LINE L2 3029 3212 -175 4 1372 692 200 0 46 chr15 103177616 103177768 -317206 - B1_Mur1 SINE Alu 0 149 5 4 1372 636 14 0 0 chr15 103177894 103177967 -317007 + (GA)n Simple_repeat Simple_repeat 1 73 0 4 1372 237 33 0 0 chr15 103177967 103177996 -316978 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1372 273 265 14 0 chr15 103178591 103178693 -316281 + L2a LINE L2 3022 3126 -261 4 1372 319 227 12 49 chr15 103178696 103178789 -316185 - ID4 SINE ID -58 94 5 4 1372 402 308 10 68 chr15 103178851 103179002 -315972 - B1F1 SINE Alu -1 146 3 4 1372 1203 104 5 25 chr15 103179011 103179208 -315766 - B2_Mm2 SINE B2 -1 194 2 4 1372 232 303 12 62 chr15 103179261 103179277 -315697 - PB1D10 SINE Alu -16 101 25 5 1372 283 277 15 0 chr15 103179277 103179342 -315632 - ID_B1 SINE B4 -53 171 106 5 1372 748 159 13 33 chr15 103179374 103179524 -315450 - B1_Mus2 SINE Alu 0 147 1 5 1372 694 136 16 41 chr15 103179538 103179661 -315313 - PB1D9 SINE Alu 0 120 1 5 1372 197 250 44 0 chr15 103179661 103179724 -315250 + L2a LINE L2 3265 3330 -96 4 1372 307 300 0 0 chr15 103180340 103180410 -314564 - PB1D7 SINE Alu -11 109 40 5 1372 186 43 0 0 chr15 103182148 103182171 -312803 + (GGGTG)n Simple_repeat Simple_repeat 4 26 0 5 1372 288 0 0 0 chr15 103183136 103183168 -311806 + (T)n Simple_repeat Simple_repeat 1 32 0 5 1372 733 84 0 0 chr15 103183176 103183283 -311691 - B2_Mm2 SINE B2 -88 107 1 5 1372 302 276 90 36 chr15 103186015 103186228 -308746 - MIR SINE MIR -43 225 10 5 1372 758 143 113 0 chr15 103186955 103187088 -307886 + B1_Mus1 SINE Alu 1 148 0 5 1372 253 233 0 0 chr15 103187089 103187149 -307825 + A-rich Low_complexity Low_complexity 1 60 0 5 1372 456 224 0 0 chr15 103188158 103188328 -306646 + (CA)n Simple_repeat Simple_repeat 2 171 0 5 1372 186 43 0 0 chr15 103188631 103188654 -306320 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1372 322 225 0 40 chr15 103188654 103188728 -306246 - PB1D7 SINE Alu -11 109 39 5 1372 428 250 284 0 chr15 103188895 103189071 -305903 + MIR SINE MIR 31 256 -6 5 1372 213 294 0 0 chr15 103189971 103190022 -304952 + ID4_ SINE ID 5 55 -28 5 1372 260 111 22 0 chr15 103190084 103190129 -304845 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1372 741 204 14 0 chr15 103190130 103190272 -304702 - B1_Mur4 SINE Alu -6 144 1 5 1372 980 214 0 20 chr15 103190982 103191182 -303792 - B3 SINE B2 -1 215 20 5 1372 875 149 0 7 chr15 103191206 103191355 -303619 - B1_Mus1 SINE Alu 0 148 1 5 1372 1910 32 20 0 chr15 103191396 103191644 -303330 - MTA_Mm LTR MaLR 0 396 144 5 1372 1623 31 0 0 chr15 103192679 103192872 -302102 - B2_Mm1t SINE B2 0 193 1 5 1372 1133 243 55 0 chr15 103192873 103193145 -301829 + Charlie19a DNA Charlie 59 345 -41 5 1372 206 274 0 0 chr15 103193315 103193366 -301608 - MIR3 SINE MIR -50 158 108 5 1372 1226 97 11 0 chr15 103193884 103194060 -300914 + B2_Mm1t SINE B2 2 179 -14 5 1372 321 152 12 33 chr15 103194126 103194199 -300775 + B2_Mm2 SINE B2 47 121 -95 5 1372 183 42 0 0 chr15 103194201 103194225 -300749 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 5 1372 599 212 120 71 chr15 103194331 103194514 -300460 + ID_B1 SINE B4 2 193 -31 5 1372 248 322 170 7 chr15 103194647 103194800 -300174 - MIRb SINE MIR -52 216 39 5 1372 207 277 0 0 chr15 103196838 103196885 -298089 + (CAG)n Simple_repeat Simple_repeat 2 48 0 5 1372 26 30 0 0 chr15 103197069 103197102 -297872 + GC_rich Low_complexity Low_complexity 1 33 0 5 1372 228 219 0 0 chr15 103197242 103197283 -297691 + C-rich Low_complexity Low_complexity 3 43 0 5 1372 204 353 138 0 chr15 103199034 103199150 -295824 - MIR3 SINE MIR -30 178 47 5 1372 295 299 213 15 chr15 103199184 103199320 -295654 - RSINE1 SINE B4 0 165 3 5 1372 231 297 48 6 chr15 103199785 103199908 -295066 - MIRb SINE MIR -27 235 107 5 1372 329 378 0 0 chr15 103200285 103200396 -294578 + PB1D10 SINE Alu 1 111 -6 5 1372 757 142 28 21 chr15 103200401 103200545 -294429 + B1_Mur3 SINE Alu 5 149 0 5 1372 387 0 0 0 chr15 103202097 103202140 -292834 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1372 931 61 48 0 chr15 103202567 103202732 -292242 + (TG)n Simple_repeat Simple_repeat 1 173 0 5 1372 708 74 0 0 chr15 103202891 103202986 -291988 + (TTCTCC)n Simple_repeat Simple_repeat 3 97 0 5 1372 792 150 0 0 chr15 103202988 103203115 -291859 - B1_Mur4 SINE Alu -16 134 8 5 1372 645 164 62 15 chr15 103203140 103203270 -291704 - B1_Mus1 SINE Alu -12 136 1 5 1372 1512 52 0 0 chr15 103203281 103203474 -291500 - B2_Mm1a SINE B2 0 193 1 5 1372 571 259 7 0 chr15 103203701 103203844 -291130 + B1_Mur1 SINE Alu 5 148 -1 5 1372 583 241 108 138 chr15 103203959 103204092 -290882 - L1MA6 LINE L1 -293 6007 5892 5 1372 1222 14 7 0 chr15 103204092 103204237 -290737 - B1_Mm SINE Alu 0 147 2 5 1372 583 241 108 138 chr15 103204237 103204502 -290472 - L1MA6 LINE L1 -409 5891 5621 5 1372 314 233 15 15 chr15 103204584 103204719 -290255 + (TA)n Simple_repeat Simple_repeat 1 135 0 5 1372 253 318 0 0 chr15 103204725 103204791 -290183 - PB1 SINE Alu -10 117 52 5 1372 1138 35 13 27 chr15 103204893 103205042 -289932 + B1_Mus1 SINE Alu 2 148 0 5 1372 573 66 0 32 chr15 103205135 103205229 -289745 + (TTTTC)n Simple_repeat Simple_repeat 3 93 0 5 1372 939 154 66 6 chr15 103205230 103205413 -289561 - B2_Mm2 SINE B2 0 195 2 5 1372 500 206 0 27 chr15 103205480 103205590 -289384 + PB1D9 SINE Alu 13 119 -1 5 1372 309 176 87 14 chr15 103205883 103205952 -289022 + ID4_ SINE ID 1 74 -9 5 1372 343 261 33 0 chr15 103206586 103206678 -288296 - PB1D9 SINE Alu -5 115 21 5 1372 185 211 0 19 chr15 103206791 103206844 -288130 + GA-rich Low_complexity Low_complexity 4 55 0 5 1372 384 22 0 0 chr15 103207757 103207802 -287172 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1372 434 304 0 103 chr15 103208116 103208281 -286693 - B1F2 SINE Alu -1 148 1 5 1372 339 275 143 27 chr15 103209614 103209810 -285164 - MIR SINE MIR -1 267 39 5 1372 606 228 96 0 chr15 103210019 103210186 -284788 - B3A SINE B2 -11 187 5 5 1372 812 159 28 0 chr15 103210243 103210388 -284586 + B1_Mur4 SINE Alu 2 150 0 5 1372 201 74 0 0 chr15 103210476 103210503 -284471 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 5 1372 421 183 192 0 chr15 103210516 103210620 -284354 - B1_Mur1 SINE Alu -9 140 17 5 1372 1164 104 5 62 chr15 103210635 103210830 -284144 - B2_Mm2 SINE B2 -11 184 1 5 1372 214 73 73 0 chr15 103210832 103210873 -284101 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 5 1372 372 255 54 9 chr15 103210884 103210995 -283979 + PB1D10 SINE Alu 1 116 -1 5 1372 215 324 27 0 chr15 103211002 103211076 -283898 + B4A SINE B4 5 80 -212 5 1372 458 315 39 17 chr15 103211161 103211342 -283632 + B4A SINE B4 89 273 -19 5 1372 447 250 28 0 chr15 103212318 103212426 -282548 - PB1D9 SINE Alu -7 113 3 5 1372 222 318 34 0 chr15 103212444 103212532 -282442 - PB1D9 SINE Alu -29 91 1 5 1372 581 224 7 22 chr15 103212557 103212694 -282280 - B1F SINE Alu -14 135 1 5 1372 464 203 171 0 chr15 103212781 103212904 -282070 + B1_Mur2 SINE Alu 6 149 0 5 1372 186 43 0 0 chr15 103212904 103212927 -282047 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1372 407 211 53 0 chr15 103213120 103213215 -281759 - PB1D9 SINE Alu -8 112 13 5 1372 233 312 26 44 chr15 103213134 103213248 -281726 + YREP_Mm Unknown Unknown 223 334 -1478 5 1372 311 333 0 11 chr15 103213848 103213939 -281035 + PB1D7 SINE Alu 19 108 -12 5 1372 440 234 10 21 chr15 103214846 103214942 -280032 + PB1D7 SINE Alu 26 120 0 5 1372 769 188 98 43 chr15 103215378 103215562 -279412 - B3 SINE B2 -9 207 14 5 1372 516 176 93 0 chr15 103215604 103215712 -279262 - PB1D9 SINE Alu -1 119 2 5 1372 1170 97 45 17 chr15 103215719 103215898 -279076 - B2_Mm2 SINE B2 -9 186 3 5 1372 342 293 91 0 chr15 103216030 103216129 -278845 + PB1D10 SINE Alu 1 108 -9 5 1372 788 126 59 0 chr15 103216137 103216272 -278702 + B1_Mus1 SINE Alu 6 148 0 5 1372 184 316 104 10 chr15 103216303 103216399 -278575 + MIR SINE MIR 96 200 -62 5 1372 491 282 7 0 chr15 103216649 103216769 -278205 - B1F1 SINE Alu -10 139 12 5 1372 246 242 65 0 chr15 103216784 103216846 -278128 + MLT1F1 LTR MaLR 406 471 -98 5 1372 320 310 87 17 chr15 103216910 103217025 -277949 - ID_B1 SINE B4 -94 130 8 5 1372 545 161 102 71 chr15 103217408 103217563 -277411 - B3A SINE B2 -22 171 4 5 1372 1169 113 16 31 chr15 103217566 103217758 -277216 - B2_Mm2 SINE B2 -6 189 1 5 1372 730 157 75 0 chr15 103217786 103217920 -277054 - B1_Mur4 SINE Alu -6 144 1 5 1372 737 250 0 7 chr15 103217968 103218113 -276861 + RSINE1 SINE B4 9 152 -13 5 1372 353 246 165 0 chr15 103218315 103218442 -276532 - B3 SINE B2 -61 155 1 5 1372 295 259 97 53 chr15 103218622 103218633 -276341 - B4 SINE B4 -90 202 86 5 1372 357 287 89 0 chr15 103218633 103218734 -276240 - PB1D10 SINE Alu -7 110 1 5 1372 845 252 38 0 chr15 103218850 103219060 -275914 - ID_B1 SINE B4 -5 219 2 5 1372 723 260 18 68 chr15 103219243 103219418 -275556 - B3 SINE B2 0 216 50 5 1372 1468 11 23 0 chr15 103219418 103219592 -275382 + B2_Mm1a SINE B2 1 178 -15 5 1372 723 260 18 68 chr15 103219592 103219635 -275339 - B3 SINE B2 -167 49 11 5 1372 207 0 0 0 chr15 103219866 103219889 -275085 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1372 226 258 140 0 chr15 103219889 103219982 -274992 - MER21B LTR ERV1 -85 778 673 5 1372 186 71 0 0 chr15 103219996 103220024 -274950 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1372 485 293 140 85 chr15 103220068 103220303 -274671 - MER21B LTR ERV1 -323 540 293 5 1372 511 233 10 0 chr15 103220920 103221023 -273951 + ID_B1 SINE B4 56 159 -65 5 1372 307 173 19 0 chr15 103221114 103221166 -273808 + B1_Mur2 SINE Alu 66 118 -31 5 1372 683 233 136 6 chr15 103221169 103221216 -273758 - B3 SINE B2 -12 204 159 5 1372 680 191 104 30 chr15 103221216 103221351 -273623 - B1_Mus2 SINE Alu 0 147 3 6 1372 683 233 136 6 chr15 103221351 103221480 -273494 - B3 SINE B2 -58 158 6 5 1372 231 333 51 51 chr15 103221505 103221622 -273352 - B3A SINE B2 -3 195 79 6 1372 188 330 106 10 chr15 103222934 103223038 -271936 - MIR3 SINE MIR -5 203 90 6 1372 354 202 317 0 chr15 103223038 103223142 -271832 - B1_Mur2 SINE Alu -8 141 5 6 1372 633 170 241 0 chr15 103223463 103223575 -271399 + B1_Mur4 SINE Alu 1 139 -11 6 1372 754 249 126 5 chr15 103223606 103223796 -271178 - B3 SINE B2 -3 213 1 6 1372 588 14 0 0 chr15 103223816 103223885 -271089 + (TC)n Simple_repeat Simple_repeat 2 70 0 6 1372 626 202 48 16 chr15 103223889 103224015 -270959 - B1_Mur2 SINE Alu -11 138 9 6 1372 273 234 31 0 chr15 103224345 103224409 -270565 + LTR33B LTR ERVL 435 500 -3 6 1372 1119 102 98 33 chr15 103224433 103224616 -270358 + B2_Mm2 SINE B2 1 195 0 6 1372 379 294 0 11 chr15 103224658 103224751 -270223 + PB1D9 SINE Alu 1 92 -28 6 1372 441 189 66 11 chr15 103224933 103225024 -269950 - B3 SINE B2 -120 96 1 6 1372 278 311 55 73 chr15 103225093 103225352 -269622 + MIRb SINE MIR 1 247 -15 6 1372 965 167 7 0 chr15 103225394 103225538 -269436 - B1_Mur4 SINE Alu -5 145 1 6 1372 319 230 77 44 chr15 103225609 103225700 -269274 - B3 SINE B2 0 216 123 6 1372 343 194 180 20 chr15 103225700 103225800 -269174 + PB1D7 SINE Alu 5 120 0 6 1372 1280 54 0 0 chr15 103225862 103226009 -268965 + B1_Mm SINE Alu 1 147 0 6 1372 183 80 0 0 chr15 103226009 103226034 -268940 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1372 495 248 0 152 chr15 103226955 103227093 -267881 + B1_Mur2 SINE Alu 6 122 -27 6 1372 302 346 0 0 chr15 103227246 103227324 -267650 - ID SINE ID -145 79 2 6 1372 1226 77 27 27 chr15 103227340 103227527 -267447 - B2_Mm2 SINE B2 -8 187 1 6 1372 318 120 20 0 chr15 103227549 103227599 -267375 + B1_Mur2 SINE Alu 87 137 -12 6 1372 532 139 16 107 chr15 103227912 103228033 -266941 + MT2B LTR ERVL 155 264 -337 6 1372 1155 49 0 0 chr15 103227926 103228068 -266906 + B1_Mus2 SINE Alu 6 147 0 6 1372 329 264 14 0 chr15 103228337 103228409 -266565 + ID4 SINE ID 2 74 -9 6 1372 317 224 0 0 chr15 103228464 103228522 -266452 + B1_Mur4 SINE Alu 1 58 -92 6 1372 451 113 23 70 chr15 103228596 103228682 -266292 + B1_Mus2 SINE Alu 66 147 0 6 1372 428 238 18 45 chr15 103228711 103228821 -266153 + ID_B1 SINE B4 116 222 -2 6 1372 21 57 0 0 chr15 103229206 103229241 -265733 + AT_rich Low_complexity Low_complexity 1 35 0 6 1372 903 232 52 16 chr15 103229284 103229477 -265497 - B3 SINE B2 -16 200 1 6 1372 935 262 22 4 chr15 103229796 103230026 -264948 + Lx9 LINE L1 7190 7423 -221 6 1372 747 282 6 39 chr15 103230072 103230253 -264721 + B3A SINE B2 24 198 0 6 1372 189 0 0 0 chr15 103230335 103230356 -264618 + (CAAAC)n Simple_repeat Simple_repeat 2 22 0 6 1372 421 205 75 11 chr15 103230647 103230751 -264223 - B1F SINE Alu -7 113 3 6 1372 1407 71 27 21 chr15 103231030 103231217 -263757 - B2_Mm1a SINE B2 -4 189 2 6 1372 361 224 79 0 chr15 103231488 103231564 -263410 + ID4_ SINE ID 2 83 0 6 1372 255 200 220 37 chr15 103231597 103231706 -263268 + B1F SINE Alu 2 130 -19 6 1372 1281 61 0 0 chr15 103231736 103231883 -263091 - B1_Mus1 SINE Alu -1 147 1 6 1372 339 118 99 42 chr15 103231892 103231963 -263011 - B1_Mus2 SINE Alu -6 141 67 6 1372 353 219 21 64 chr15 103231962 103232067 -262907 + B4 SINE B4 70 169 -123 6 1372 640 147 18 18 chr15 103231991 103232102 -262872 + PB1D9 SINE Alu 9 119 -1 6 1372 688 155 37 0 chr15 103232466 103232606 -262368 - B1_Mur3 SINE Alu 0 149 1 6 1372 950 184 0 0 chr15 103233407 103233554 -261420 + B3 SINE B2 2 148 -68 6 1372 786 194 58 22 chr15 103233583 103233720 -261254 + B1_Mur2 SINE Alu 3 144 -5 6 1372 721 207 65 29 chr15 103234006 103234145 -260829 + B1_Mur3 SINE Alu 1 144 -5 6 1372 855 181 20 14 chr15 103234264 103234410 -260564 - B1_Mus2 SINE Alu 0 147 1 6 1372 184 289 0 19 chr15 103234527 103234580 -260394 - L2c LINE L2 0 3387 3336 6 1372 291 54 0 0 chr15 103234733 103234770 -260204 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 1372 222 37 0 0 chr15 103234976 103235003 -259971 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1372 864 131 46 8 chr15 103235379 103235510 -259464 - B1_Mus1 SINE Alu -11 137 2 6 1372 318 273 180 10 chr15 103235636 103235736 -259238 - PB1D10 SINE Alu 0 117 1 6 1372 769 247 32 84 chr15 103235847 103235994 -258980 - B3A SINE B2 -18 180 43 6 1372 1720 52 0 0 chr15 103235994 103236186 -258788 - B2_Mm1t SINE B2 -1 192 1 6 1372 769 247 32 84 chr15 103236186 103236228 -258746 - B3A SINE B2 -156 42 1 6 1372 408 297 102 57 chr15 103236426 103236583 -258391 - RSINE1 SINE B4 0 165 2 6 1372 567 43 0 0 chr15 103236608 103236678 -258296 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 6 1372 1249 55 7 0 chr15 103236684 103236830 -258144 - B1_Mus1 SINE Alu 0 148 2 6 1372 932 188 24 0 chr15 103236832 103237002 -257972 - B2_Mm2 SINE B2 -19 176 3 6 1372 3326 42 39 3 chr15 103237046 103237428 -257546 + MTA_Mm LTR MaLR 1 396 0 6 1372 8099 83 5 70 chr15 103237428 103238602 -256372 + MTA_Mm-int LTR MaLR 1 1098 0 6 1372 3323 42 39 3 chr15 103238602 103238984 -255990 + MTA_Mm LTR MaLR 1 396 0 6 1372 870 221 25 0 chr15 103239001 103239164 -255810 - B3 SINE B2 -49 167 1 6 1372 354 333 48 54 chr15 103239540 103239708 -255266 - B3A SINE B2 -1 197 31 6 1372 1232 75 0 20 chr15 103239719 103239869 -255105 - B1_Mus2 SINE Alu 0 147 1 6 1372 833 155 14 34 chr15 103240342 103240489 -254485 + B1_Mur3 SINE Alu 6 149 0 6 1372 322 263 0 95 chr15 103240565 103240649 -254325 - B2_Mm2 SINE B2 -119 76 1 6 1372 585 216 68 60 chr15 103240733 103240866 -254108 - B1_Mus2 SINE Alu -13 134 1 6 1372 345 296 45 0 chr15 103240893 103240981 -253993 - B3 SINE B2 -10 206 115 6 1372 273 138 30 30 chr15 103240999 103241066 -253908 + RMER4A LTR ERVK 10 76 -509 6 1372 36257 36 1 1 chr15 103241066 103247975 -246999 + L1Md_T LINE L1 1 5589 -297 6 1372 9613 4 0 0 chr15 103247975 103248971 -246003 + L1Md_T LINE L1 5590 6585 0 6 1372 2265 148 51 5 chr15 103248981 103249375 -245599 + RMER4A LTR ERVK 52 463 -3 6 1372 492 152 192 0 chr15 103249381 103249480 -245494 - B3 SINE B2 -98 118 1 6 1372 637 238 74 47 chr15 103249629 103249819 -245155 + B3A SINE B2 4 198 0 6 1372 295 232 416 9 chr15 103250057 103250171 -244803 - B3A SINE B2 -38 160 1 6 1372 699 191 31 16 chr15 103250195 103250323 -244651 - B1_Mur3 SINE Alu -19 130 1 6 1372 726 244 150 0 chr15 103251186 103251379 -243595 - ID_B1 SINE B4 -2 222 1 6 1372 519 17 0 0 chr15 103252003 103252063 -242911 + (TC)n Simple_repeat Simple_repeat 1 60 0 6 1372 342 0 0 0 chr15 103252063 103252100 -242874 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1372 804 199 0 46 chr15 103252403 103252556 -242418 - B1_Mus1 SINE Alu 0 148 3 6 1372 1056 121 44 55 chr15 103252625 103252808 -242166 - B2_Mm2 SINE B2 -14 181 1 6 1372 437 252 207 0 chr15 103252928 103253063 -241911 + B3A SINE B2 1 163 -35 6 1372 336 197 38 112 chr15 103253093 103253173 -241801 + RSINE1 SINE B4 32 105 -60 6 1372 443 229 74 0 chr15 103253236 103253358 -241616 + Lx7 LINE L1 7566 7696 0 6 1372 836 238 53 40 chr15 103253447 103253675 -241299 + B4A SINE B4 1 231 -61 6 1372 288 339 41 16 chr15 103253732 103253855 -241119 + ID_B1 SINE B4 82 207 -17 6 1372 786 212 48 81 chr15 103253859 103254069 -240905 + B3 SINE B2 11 213 -3 6 1372 865 243 16 11 chr15 103254108 103254291 -240683 - B3A SINE B2 -13 185 2 6 1372 21 0 0 0 chr15 103254396 103254417 -240557 + AT_rich Low_complexity Low_complexity 1 21 0 6 1372 787 222 79 48 chr15 103254422 103254611 -240363 + B3A SINE B2 1 195 -3 6 1372 595 169 315 0 chr15 103254627 103254805 -240169 + RMER1B Other Other 831 1064 -2 6 1372 1461 73 14 5 chr15 103254877 103255084 -239890 - L1_Mus4 LINE L1 -1 6635 6427 6 1372 845 251 42 24 chr15 103255125 103255337 -239637 + B3 SINE B2 1 216 0 6 1372 878 159 23 0 chr15 103256094 103256226 -238748 + B1_Mur4 SINE Alu 2 136 -14 6 1372 279 0 0 0 chr15 103256230 103256261 -238713 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1372 1425 81 43 0 chr15 103256426 103256611 -238363 - B2_Mm2 SINE B2 -2 193 1 6 1372 1993 64 4 12 chr15 103256621 103256874 -238100 + L1_Mus2 LINE L1 6316 6566 0 6 1372 318 181 21 21 chr15 103258017 103258113 -236861 + (TCTA)n Simple_repeat Simple_repeat 2 97 0 6 1372 316 202 0 0 chr15 103258174 103258240 -236734 - ID4 SINE ID -13 70 5 6 1372 434 301 16 47 chr15 103258278 103258407 -236567 - RSINE1 SINE B4 -35 130 6 6 1372 357 315 45 0 chr15 103258415 103258526 -236448 - PB1D10 SINE Alu -1 116 1 6 1372 836 204 95 6 chr15 103259232 103259400 -235574 + B3A SINE B2 6 188 -10 6 1372 953 168 0 14 chr15 103259434 103259579 -235395 - B1_Mur3 SINE Alu -6 143 1 6 1372 240 239 13 53 chr15 103262031 103262049 -232925 + ID SINE ID 70 84 -140 6 1372 373 206 19 31 chr15 103262049 103262152 -232822 + B1F1 SINE Alu 4 97 -23 6 1372 283 0 47 23 chr15 103262156 103262199 -232775 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 7 1372 204 357 47 12 chr15 103262302 103262364 -232610 + MER5B DNA MER1_type 2 63 -115 7 1372 578 159 51 42 chr15 103262364 103262482 -232492 + PB1D9 SINE Alu 1 119 -1 7 1372 204 357 47 12 chr15 103262482 103262504 -232470 + MER5B DNA MER1_type 64 89 -89 7 1372 344 200 154 11 chr15 103262548 103262639 -232335 + MER5B DNA MER1_type 75 178 0 7 1372 180 77 0 0 chr15 103263494 103263520 -231454 + (TATAA)n Simple_repeat Simple_repeat 5 30 0 7 1372 563 259 170 0 chr15 103263612 103263747 -231227 + RSINE1 SINE B4 6 163 -2 7 1372 393 321 18 18 chr15 103263990 103264101 -230873 + B4A SINE B4 1 111 -181 7 1372 439 255 67 33 chr15 103264101 103264251 -230723 - L1MA9 LINE L1 -161 6151 5997 7 1372 705 131 0 0 chr15 103264251 103264350 -230624 - B1_Mur4 SINE Alu -51 99 1 7 1372 252 0 0 0 chr15 103265036 103265064 -229910 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 7 1372 600 266 0 0 chr15 103265072 103265200 -229774 - B1_Mm SINE Alu -19 128 1 7 1372 678 217 183 28 chr15 103265227 103265407 -229567 + B3 SINE B2 2 209 -7 7 1372 332 291 25 0 chr15 103265533 103265612 -229362 + B1_Mur4 SINE Alu 1 81 -69 7 1372 356 203 81 0 chr15 103265595 103265669 -229305 - B1_Mur2 SINE Alu -21 128 49 7 1372 682 272 0 0 chr15 103265803 103265928 -229046 + ID_B1 SINE B4 82 206 -18 7 1372 3493 123 19 141 chr15 103265931 103266408 -228566 - RMER4B LTR ERVK -1 584 184 7 1372 1186 83 7 0 chr15 103266408 103266552 -228422 - B1_Mm SINE Alu -1 146 2 7 1372 3493 123 19 141 chr15 103266552 103266739 -228235 - RMER4B LTR ERVK -402 183 1 7 1372 252 282 55 27 chr15 103266812 103266885 -228089 - B4A SINE B4 0 292 218 7 1372 189 0 0 0 chr15 103266899 103266920 -228054 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 7 1372 583 273 93 7 chr15 103266925 103267076 -227898 - RSINE1 SINE B4 0 165 2 7 1372 420 220 73 6 chr15 103267084 103267181 -227793 - RSINE1 SINE B4 -179 113 14 7 1372 826 247 86 0 chr15 103267185 103267371 -227603 - B4A SINE B4 -65 227 26 7 1372 211 252 22 173 chr15 103267270 103267409 -227565 - B3A SINE B2 -80 118 1 7 1372 2552 93 0 56 chr15 103267409 103267785 -227189 + L1Md_F2 LINE L1 6227 6581 -1 7 1372 335 219 70 47 chr15 103268034 103268120 -226854 + PB1 SINE Alu 18 105 -22 7 1372 241 292 10 128 chr15 103268094 103268196 -226778 + MT2B2 LTR ERVL 151 240 -344 7 1372 1690 42 0 0 chr15 103268501 103268691 -226283 - B2_Mm1t SINE B2 -2 191 2 7 1372 354 45 0 0 chr15 103269778 103269822 -225152 + (TTA)n Simple_repeat Simple_repeat 2 45 0 7 1372 878 196 0 0 chr15 103269822 103269955 -225019 - B1_Mur2 SINE Alu -12 137 5 7 1372 333 0 0 0 chr15 103270531 103270568 -224406 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1372 1114 202 20 5 chr15 103270638 103270842 -224132 - B3 SINE B2 -9 207 1 7 1372 596 227 46 15 chr15 103270854 103270984 -223990 - RSINE1 SINE B4 -29 136 3 7 1372 261 146 0 0 chr15 103270992 103271040 -223934 + (ATG)n Simple_repeat Simple_repeat 1 48 0 7 1372 751 274 66 31 chr15 103271041 103271237 -223737 - B4A SINE B4 -76 216 14 7 1372 550 309 7 14 chr15 103271333 103271474 -223500 + RSINE1 SINE B4 3 142 -23 7 1372 345 82 0 0 chr15 103271480 103271529 -223445 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 7 1372 1562 177 195 0 chr15 103271987 103272331 -222643 - MTD LTR MaLR -8 411 1 7 1372 7688 98 3 3 chr15 103272584 103273737 -221237 - L1_Mus3 LINE L1 -6 6632 5480 7 1372 225 0 0 0 chr15 103273840 103273865 -221109 + (TTAA)n Simple_repeat Simple_repeat 3 27 0 7 1372 688 230 14 14 chr15 103273865 103273998 -220976 - B1_Mur3 SINE Alu -14 135 2 7 1372 491 110 130 0 chr15 103274233 103274333 -220641 - L1Md_F2 LINE L1 0 6582 6470 7 1372 395 254 102 47 chr15 103275472 103275600 -219374 + B3A SINE B2 2 136 -62 7 1372 251 225 0 14 chr15 103275600 103275672 -219302 + CT-rich Low_complexity Low_complexity 2 72 0 7 1372 745 87 9 9 chr15 103275694 103275810 -219164 + (TCC)n Simple_repeat Simple_repeat 3 118 0 7 1372 461 32 16 0 chr15 103277201 103277264 -217710 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 1372 387 0 0 0 chr15 103277270 103277313 -217661 + (TAA)n Simple_repeat Simple_repeat 2 44 0 7 1372 986 124 82 12 chr15 103278099 103278270 -216704 + B2_Mm1t SINE B2 2 184 -9 7 1372 21 36 0 0 chr15 103278576 103278604 -216370 + AT_rich Low_complexity Low_complexity 1 28 0 7 1372 253 317 62 35 chr15 103278959 103279103 -215871 + MER5B DNA MER1_type 2 149 -29 7 1372 2118 114 66 6 chr15 103280168 103280503 -214471 - RLTR15 LTR ERVK -4 355 1 7 1372 30 59 0 0 chr15 103280540 103280591 -214383 + AT_rich Low_complexity Low_complexity 1 51 0 7 1372 258 231 0 0 chr15 103280614 103280666 -214308 - ID_B1 SINE B4 -70 154 103 7 1372 298 278 16 80 chr15 103281071 103281137 -213837 + RLTR23 LTR ERV1 314 376 -54 7 1372 4324 132 99 1 chr15 103281137 103281806 -213168 + RMER19A LTR ERVK 4 737 0 7 1372 298 278 16 80 chr15 103281806 103281864 -213110 + RLTR23 LTR ERV1 377 430 0 7 1372 498 296 9 0 chr15 103281866 103281974 -213000 - ID_B1 SINE B4 -114 110 2 7 1372 3405 154 14 19 chr15 103282162 103282737 -212237 + RMER15 LTR ERVL 1 572 -3 7 1372 207 289 0 0 chr15 103282782 103282827 -212147 - MER5A DNA MER1_type -5 184 140 7 1372 487 194 148 31 chr15 103282845 103282973 -212001 + B3A SINE B2 1 143 -55 7 1372 357 24 0 0 chr15 103282993 103283035 -211939 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1372 746 181 32 19 chr15 103283094 103283252 -211722 + B2_Mm2 SINE B2 2 161 -34 7 1372 387 0 0 0 chr15 103283252 103283295 -211679 + (CTAA)n Simple_repeat Simple_repeat 2 44 0 7 1372 208 267 17 0 chr15 103283307 103283367 -211607 - MER5A DNA MER1_type -78 111 51 7 1372 211 147 0 0 chr15 103283400 103283434 -211540 - MER5A DNA MER1_type -127 62 29 7 1372 412 229 28 37 chr15 103283569 103283678 -211296 + ID_B1 SINE B4 107 214 -10 7 1372 186 174 0 0 chr15 103283743 103283789 -211185 + (TA)n Simple_repeat Simple_repeat 1 46 0 7 1373 189 121 0 0 chr15 103284766 103284799 -210175 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1373 25 0 0 0 chr15 103286215 103286240 -208734 + AT_rich Low_complexity Low_complexity 1 25 0 7 1373 667 242 0 0 chr15 103286571 103286699 -208275 + ID_B1 SINE B4 93 220 -4 7 1373 258 235 11 129 chr15 103286869 103286962 -208012 - RSINE1 SINE B4 0 165 84 7 1373 276 297 6 132 chr15 103286936 103287095 -207879 - B1_Mur3 SINE Alu -7 142 4 7 1373 413 279 74 98 chr15 103287095 103287153 -207821 - B4 SINE B4 -218 74 21 7 1373 333 298 0 0 chr15 103287186 103287270 -207704 - RSINE1 SINE B4 -4 161 78 7 1373 1389 256 95 11 chr15 103287298 103287824 -207150 - L1MB2 LINE L1 -3 6168 5599 7 1373 271 257 14 0 chr15 103287942 103288012 -206962 - L1MB2 LINE L1 -608 5575 5505 7 1373 257 282 39 0 chr15 103288042 103288120 -206854 - ID4 SINE ID -2 81 1 7 1373 363 256 24 24 chr15 103288120 103288284 -206690 - L1MB2 LINE L1 -730 5438 5275 7 1373 410 293 119 16 chr15 103288394 103288637 -206337 - L1MC4 LINE L1 -74 7968 7701 7 1373 417 218 0 0 chr15 103289206 103289284 -205690 + B3A SINE B2 2 79 -119 7 1373 342 307 30 96 chr15 103289362 103289528 -205446 + B4 SINE B4 6 160 -132 7 1373 542 252 117 8 chr15 103289536 103289664 -205310 + B1_Mur1 SINE Alu 1 142 -7 7 1373 249 57 0 0 chr15 103289693 103289728 -205246 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1373 424 291 77 0 chr15 103289883 103290079 -204895 - L1ME1 LINE L1 -316 5863 5653 7 1373 475 279 14 0 chr15 103290144 103290284 -204690 - L1MA5 LINE L1 -25 6275 6134 7 1373 27 29 0 0 chr15 103290791 103290825 -204149 + AT_rich Low_complexity Low_complexity 1 34 0 7 1373 679 285 0 0 chr15 103290845 103290982 -203992 - RSINE1 SINE B4 -7 158 22 7 1373 216 324 14 0 chr15 103291157 103291231 -203743 - ID4 SINE ID -4 79 5 7 1373 726 245 0 0 chr15 103291288 103291435 -203539 - B1_Mus2 SINE Alu 0 147 1 7 1373 279 213 0 47 chr15 103291439 103291503 -203471 - ID_B1 SINE B4 -1 223 163 7 1373 216 0 0 0 chr15 103291506 103291530 -203444 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1373 1171 68 0 0 chr15 103291530 103291677 -203297 - B1_Mus2 SINE Alu 0 147 1 7 1373 290 274 31 14 chr15 103291677 103291758 -203216 - PB1D10 SINE Alu -54 95 13 7 1373 498 287 14 34 chr15 103293448 103293596 -201378 + B1F1 SINE Alu 5 149 0 7 1373 482 294 0 0 chr15 103293748 103293867 -201107 + PB1D7 SINE Alu 2 120 0 7 1373 422 289 189 5 chr15 103293907 103294116 -200858 + B4A SINE B4 34 280 -12 7 1373 248 196 0 0 chr15 103294500 103294551 -200423 - tRNA-Ala-GCY_ tRNA tRNA -8 67 17 7 1373 25 51 0 0 chr15 103294558 103294597 -200377 + AT_rich Low_complexity Low_complexity 1 39 0 7 1373 498 250 97 0 chr15 103294615 103294739 -200235 - RSINE1 SINE B4 -29 136 1 7 1373 555 233 14 43 chr15 103295240 103295379 -199595 + MIR SINE MIR 30 164 -98 7 1373 668 185 0 49 chr15 103295386 103295528 -199446 + ID_B1 SINE B4 90 224 0 7 1373 324 239 0 53 chr15 103295694 103295769 -199205 + B1F1 SINE Alu 1 71 -78 7 1373 183 80 0 0 chr15 103296289 103296314 -198660 + (T)n Simple_repeat Simple_repeat 1 25 0 7 1373 260 189 19 0 chr15 103296314 103296367 -198607 - RSINE1 SINE B4 -2 163 110 7 1373 1573 43 5 0 chr15 103296367 103296554 -198420 - B2_Mm1t SINE B2 -5 188 1 7 1373 521 153 159 18 chr15 103296557 103296670 -198304 - B1_Mus2 SINE Alu -13 134 6 7 1373 1080 210 10 0 chr15 103297080 103297280 -197694 - B3 SINE B2 0 216 15 7 1373 345 310 52 62 chr15 103297447 103297736 -197238 - L2 LINE L2 -1210 2209 1924 7 1373 436 209 22 0 chr15 103298105 103298196 -196778 - PB1D7 SINE Alu -1 119 27 7 1373 1020 234 29 0 chr15 103298236 103298445 -196529 + B3 SINE B2 1 215 -1 8 1373 739 199 0 0 chr15 103298505 103298636 -196338 - B1_Mur1 SINE Alu -7 142 12 8 1373 23 0 0 0 chr15 103298697 103298720 -196254 + AT_rich Low_complexity Low_complexity 1 23 0 8 1373 258 215 0 41 chr15 103298774 103298871 -196103 + (TATATG)n Simple_repeat Simple_repeat 1 93 0 8 1373 322 284 36 73 chr15 103298907 103299044 -195930 - RSINE1 SINE B4 0 165 34 8 1373 415 202 121 0 chr15 103299114 103299213 -195761 - B1_Mur2 SINE Alu -2 147 37 8 1373 231 337 33 0 chr15 103299304 103299330 -195644 - BC1_Mm scRNA scRNA -55 97 3 8 1373 298 156 91 30 chr15 103299330 103299396 -195578 - ID SINE ID -152 72 3 8 1373 1225 38 6 6 chr15 103299438 103299598 -195376 - L1Md_F2 LINE L1 -13 6569 6410 8 1373 213 270 16 16 chr15 103299674 103299738 -195236 + ID4 SINE ID 20 83 0 8 1373 487 291 39 0 chr15 103299855 103299982 -194992 + RSINE1 SINE B4 21 152 -13 8 1373 184 254 0 0 chr15 103300210 103300265 -194709 - MIRc SINE MIR -32 236 182 8 1373 323 177 20 20 chr15 103300271 103300369 -194605 + (TA)n Simple_repeat Simple_repeat 1 98 0 8 1373 230 239 0 43 chr15 103301261 103301331 -193643 + T-rich Low_complexity Low_complexity 4 70 0 8 1373 373 225 62 18 chr15 103301348 103301461 -193513 - PB1D9 SINE Alu -2 118 1 8 1373 252 59 0 0 chr15 103302260 103302294 -192680 + (TG)n Simple_repeat Simple_repeat 1 34 0 8 1373 1200 238 18 11 chr15 103302314 103302590 -192384 - B4 SINE B4 -14 278 1 8 1373 432 0 0 0 chr15 103302615 103302663 -192311 + (TG)n Simple_repeat Simple_repeat 1 48 0 8 1373 321 287 11 0 chr15 103303021 103303115 -191859 - B4 SINE B4 -192 100 6 8 1373 228 35 0 0 chr15 103304168 103304197 -190777 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 8 1373 495 0 0 0 chr15 103304665 103304720 -190254 + (TC)n Simple_repeat Simple_repeat 1 55 0 8 1373 491 161 152 0 chr15 103304724 103304836 -190138 - B1_Mur4 SINE Alu -7 143 15 8 1373 902 222 5 76 chr15 103304918 103305128 -189846 - B3A SINE B2 0 198 4 8 1373 532 294 7 0 chr15 103305154 103305297 -189677 + ID_B1 SINE B4 81 224 0 8 1373 464 234 93 0 chr15 103305312 103305419 -189555 + B1F SINE Alu 33 149 0 8 1373 391 200 0 0 chr15 103306728 103306803 -188171 + RMER30 DNA MER1_type 13 87 -115 8 1373 226 50 50 0 chr15 103306812 103306852 -188122 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 1373 26 0 0 0 chr15 103307166 103307192 -187782 + AT_rich Low_complexity Low_complexity 1 26 0 8 1373 243 295 130 8 chr15 103307456 103307579 -187395 + MIRb SINE MIR 131 268 0 8 1373 339 290 60 0 chr15 103309492 103309592 -185382 + ID_B1 SINE B4 113 218 -6 8 1373 701 309 81 46 chr15 103309978 103310412 -184562 - L2a LINE L2 -4 3422 2974 8 1373 580 242 0 8 chr15 103310925 103311058 -183916 - B3 SINE B2 0 216 85 8 1373 260 266 11 102 chr15 103311072 103311160 -183814 - PB1D10 SINE Alu -7 110 31 8 1373 430 213 42 76 chr15 103311160 103311409 -183565 - LTRIS_Mm LTR ERV1 0 482 238 8 1373 442 279 70 3 chr15 103312171 103312325 -182649 + MIRb SINE MIR 35 204 -64 8 1373 328 291 114 0 chr15 103314450 103314608 -180366 - MIR SINE MIR -45 217 42 8 1373 342 0 0 0 chr15 103314633 103314671 -180303 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 1373 237 287 43 45 chr15 103316196 103316299 -178675 - MIRb SINE MIR -107 169 65 8 1373 613 265 133 0 chr15 103316360 103316541 -178433 + B3 SINE B2 1 205 -11 8 1373 680 118 14 22 chr15 103317745 103317883 -177091 + GA-rich Low_complexity Low_complexity 3 139 0 8 1373 1004 66 7 0 chr15 103318237 103318374 -176600 + (GA)n Simple_repeat Simple_repeat 1 138 0 8 1373 217 0 29 29 chr15 103319129 103319163 -175811 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 1373 447 284 60 13 chr15 103319441 103319591 -175383 - MIRb SINE MIR -99 169 13 8 1373 1072 244 60 39 chr15 103319965 103320250 -174724 - B4A SINE B4 0 292 2 8 1373 332 157 0 22 chr15 103321729 103321820 -173154 + (CAGAGA)n Simple_repeat Simple_repeat 2 90 0 8 1373 208 250 0 0 chr15 103322200 103322240 -172734 + MIR3 SINE MIR 117 156 -52 8 1373 321 303 68 16 chr15 103322245 103322400 -172574 + MER5A DNA MER1_type 3 176 -13 8 1373 185 279 88 0 chr15 103322625 103322693 -172281 - L3 LINE CR1 -211 4278 4205 8 1373 641 279 32 0 chr15 103324746 103324900 -170074 - RSINE1 SINE B4 -4 161 3 8 1373 801 163 256 0 chr15 103324945 103325117 -169857 - B3 SINE B2 0 216 1 8 1373 575 271 0 7 chr15 103325193 103325338 -169636 - ID_B1 SINE B4 0 224 81 8 1373 225 180 0 0 chr15 103325610 103325660 -169314 + CT-rich Low_complexity Low_complexity 4 53 0 8 1373 335 302 28 0 chr15 103325673 103325779 -169195 - PB1D10 SINE Alu -7 110 2 8 1373 23 68 0 0 chr15 103326637 103326681 -168293 + AT_rich Low_complexity Low_complexity 1 44 0 8 1373 516 234 94 0 chr15 103326691 103326819 -168155 - B1F SINE Alu -9 140 1 8 1373 470 273 18 0 chr15 103329528 103329638 -165336 - PB1D10 SINE Alu -5 112 1 8 1373 741 272 96 33 chr15 103329779 103330113 -164861 - L1MD2 LINE L1 -15 6344 5990 8 1373 212 329 0 12 chr15 103331561 103331647 -163327 + GA-rich Low_complexity Low_complexity 2 86 0 8 1373 211 321 108 45 chr15 103332845 103333021 -161953 + L3b LINE CR1 195 381 -101 8 1373 329 149 0 15 chr15 103333607 103333675 -161299 + (CGG)n Simple_repeat Simple_repeat 2 68 0 8 1373 24 0 0 0 chr15 103334024 103334048 -160926 + GC_rich Low_complexity Low_complexity 1 24 0 8 1373 477 138 0 0 chr15 103337697 103337777 -157197 + (TC)n Simple_repeat Simple_repeat 1 80 0 8 1373 183 329 85 37 chr15 103338518 103338600 -156374 + MIR3 SINE MIR 12 97 -111 8 1373 257 317 147 10 chr15 103339515 103339567 -155407 + PB1D10 SINE Alu 1 116 -1 8 1373 306 180 0 0 chr15 103339567 103339617 -155357 + ID_B1 SINE B4 174 223 -1 8 1373 294 95 0 0 chr15 103339619 103339661 -155313 + (CAGC)n Simple_repeat Simple_repeat 4 45 0 8 1373 327 280 105 19 chr15 103342674 103342821 -152153 - MIRb SINE MIR -31 231 74 8 1373 427 192 155 1 chr15 103343298 103343390 -151584 + B1_Mus2 SINE Alu 1 103 -44 8 1373 549 0 0 0 chr15 103343390 103343451 -151523 + (GA)n Simple_repeat Simple_repeat 1 61 0 8 1373 400 220 88 44 chr15 103343451 103343472 -151502 + PB1D9 SINE Alu 99 118 -2 8 1373 210 71 0 0 chr15 103343515 103343543 -151431 + (CAA)n Simple_repeat Simple_repeat 2 29 0 8 1373 736 39 29 0 chr15 103344978 103345081 -149893 + (TTTC)n Simple_repeat Simple_repeat 3 108 0 8 1373 514 308 11 90 chr15 103346128 103346317 -148657 - ID_B1 SINE B4 -49 175 2 8 1373 360 0 0 0 chr15 103346834 103346874 -148100 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 1373 374 267 27 45 chr15 103347707 103347817 -147157 + RSINE1 SINE B4 12 119 -46 8 1373 497 16 0 16 chr15 103347822 103347885 -147089 + (CA)n Simple_repeat Simple_repeat 2 63 0 8 1373 184 333 22 44 chr15 103347910 103348001 -146973 - MER5A DNA MER1_type -84 105 17 8 1373 633 80 0 0 chr15 103348004 103348092 -146882 + (TCTA)n Simple_repeat Simple_repeat 3 90 0 8 1373 826 141 0 0 chr15 103348100 103348221 -146753 - B1_Mus1 SINE Alu -10 138 18 8 1373 610 204 208 38 chr15 103348233 103348416 -146558 - B3 SINE B2 -2 214 1 8 1373 272 310 33 49 chr15 103348583 103348705 -146269 + MIRc SINE MIR 142 261 -7 8 1373 274 266 25 0 chr15 103350644 103350723 -144251 + ID4_ SINE ID 2 82 -1 8 1373 207 246 65 16 chr15 103350735 103350797 -144177 - L3 LINE CR1 -18 4471 4407 8 1373 267 304 100 12 chr15 103350867 103351027 -143947 + Charlie5 DNA MER1_type 2369 2542 -82 8 1373 1043 229 9 18 chr15 103351062 103351280 -143694 - B3 SINE B2 0 216 1 8 1373 366 228 87 0 chr15 103351344 103351436 -143538 - ID_B1 SINE B4 0 224 125 8 1373 28 0 0 0 chr15 103351441 103351469 -143505 + AT_rich Low_complexity Low_complexity 1 28 0 8 1373 381 273 175 0 chr15 103354353 103354496 -140478 - MIRb SINE MIR -42 226 59 8 1373 319 309 43 0 chr15 103354571 103354665 -140309 - PB1D10 SINE Alu -19 98 1 8 1373 386 300 126 13 chr15 103356367 103356575 -138399 - MIR SINE MIR -5 257 39 8 1373 195 42 0 0 chr15 103356591 103356615 -138359 + (TG)n Simple_repeat Simple_repeat 1 24 0 8 1373 22 35 0 0 chr15 103362112 103362141 -132833 + AT_rich Low_complexity Low_complexity 1 29 0 8 1373 423 281 91 0 chr15 103362187 103362308 -132666 + MER46C DNA MER2_type 173 304 -34 8 1373 198 0 0 0 chr15 103364132 103364154 -130820 + (TTTTTG)n Simple_repeat Simple_repeat 4 25 0 8 1373 198 0 0 0 chr15 103365897 103365919 -129055 + (TG)n Simple_repeat Simple_repeat 1 22 0 8 1373 293 0 130 0 chr15 103366249 103366326 -128648 + (CAGG)n Simple_repeat Simple_repeat 2 88 0 8 1373 1690 26 0 0 chr15 103366724 103366917 -128057 - B2_Mm1a SINE B2 0 193 1 8 1373 324 0 0 0 chr15 103371089 103371125 -123849 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 1373 192 258 61 61 chr15 103371142 103371208 -123766 - L2c LINE L2 -178 3209 3144 8 1373 530 264 86 21 chr15 103371550 103371736 -123238 - MARNA DNA Mariner -106 480 283 8 1373 229 270 153 0 chr15 103372288 103372378 -122596 - L2a LINE L2 0 3426 3274 8 1373 315 0 0 0 chr15 103372488 103372523 -122451 + (CA)n Simple_repeat Simple_repeat 2 36 0 9 1373 555 16 0 0 chr15 103372523 103372586 -122388 + (GA)n Simple_repeat Simple_repeat 2 65 0 9 1373 361 327 19 0 chr15 103372652 103372759 -122215 + MIRb SINE MIR 53 161 -107 9 1373 333 337 31 159 chr15 103373332 103373621 -121353 - MLT1B LTR MaLR -5 385 134 9 1373 975 242 16 0 chr15 103374474 103374668 -120306 + B3 SINE B2 1 197 -19 9 1373 2210 185 110 14 chr15 103374668 103375150 -119824 - RLTR11A LTR ERVK 0 528 1 9 1373 3332 61 0 2 chr15 103375186 103375583 -119391 - MTA_Mm LTR MaLR 0 396 1 9 1373 1781 196 46 20 chr15 103375763 103376158 -118816 - Lx9 LINE L1 -405 7239 6835 9 1373 270 0 0 0 chr15 103376553 103376583 -118391 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 9 1373 590 321 49 25 chr15 103376958 103377201 -117773 + MIRb SINE MIR 20 268 0 9 1373 213 346 29 29 chr15 103378342 103378446 -116528 - L2a LINE L2 -261 3165 3062 9 1373 945 213 49 15 chr15 103378479 103378684 -116290 + B3 SINE B2 1 212 -4 9 1373 249 208 127 36 chr15 103379223 103379333 -115641 - Lx8 LINE L1 0 7473 7354 9 1373 301 140 0 34 chr15 103379516 103379575 -115399 - ORR1E LTR MaLR 0 379 323 9 1373 1094 251 17 50 chr15 103379575 103379877 -115097 + B4 SINE B4 1 292 0 9 1373 378 0 0 0 chr15 103379895 103379937 -115037 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 1373 1148 262 15 74 chr15 103379955 103380281 -114693 - ORR1E LTR MaLR -42 317 11 9 1373 236 360 22 7 chr15 103380374 103380511 -114463 - L2a LINE L2 -2341 1078 940 9 1373 271 349 123 58 chr15 103380587 103381073 -113901 - L2a LINE L2 -2698 721 204 9 1373 281 277 74 123 chr15 103381174 103381367 -113607 + MLT1D LTR MaLR 1 182 -445 9 1373 600 285 81 14 chr15 103381380 103381590 -113384 + MLT1D LTR MaLR 253 476 -29 9 1373 209 224 17 33 chr15 103382356 103382416 -112558 + CT-rich Low_complexity Low_complexity 4 62 0 9 1373 207 69 0 0 chr15 103382540 103382569 -112405 + (CCA)n Simple_repeat Simple_repeat 3 31 0 9 1373 180 0 0 0 chr15 103382786 103382806 -112168 + (T)n Simple_repeat Simple_repeat 1 20 0 9 1373 914 60 0 0 chr15 103382806 103382922 -112052 - B1_Mus2 SINE Alu 0 147 32 9 1373 340 195 107 24 chr15 103382849 103382933 -112041 - RLTR25B LTR ERVK -519 509 419 9 1373 943 161 0 7 chr15 103384209 103384353 -110621 - B1_Mur4 SINE Alu -6 144 2 9 1373 2045 247 133 4 chr15 103384361 103385209 -109765 - Lx6 LINE L1 -15 7445 6272 9 1373 2266 119 62 0 chr15 103385210 103385580 -109394 + RMER20A LTR ERVK 1 393 -123 9 1373 20354 164 76 44 chr15 103385591 103387420 -107554 - Lx6 LINE L1 -1211 6249 4287 9 1373 506 30 0 29 chr15 103387420 103387489 -107485 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 9 1373 20354 161 70 50 chr15 103387489 103387895 -107079 - Lx6 LINE L1 -1594 4286 3877 9 1373 338 99 295 90 chr15 103387895 103388017 -106957 - B2_Mm2 SINE B2 -1 194 48 9 1373 20354 161 70 50 chr15 103388017 103388065 -106909 - Lx6 LINE L1 -1594 3876 3827 9 1373 1267 96 11 22 chr15 103388065 103388246 -106728 - B2_Mm1t SINE B2 -14 179 1 9 1373 20354 168 68 45 chr15 103388246 103391132 -103842 - Lx6 LINE L1 -2054 3826 868 9 1373 286 232 0 0 chr15 103394813 103394869 -100105 - PB1D7 SINE Alu -64 56 1 9 1373 771 11 0 0 chr15 103396294 103396382 -98592 + (TTC)n Simple_repeat Simple_repeat 3 90 0 9 1373 405 0 0 0 chr15 103396382 103396427 -98547 + (TC)n Simple_repeat Simple_repeat 1 45 0 9 1373 185 35 69 0 chr15 103396500 103396529 -98445 + (TATG)n Simple_repeat Simple_repeat 3 33 0 9 1373 252 258 144 6 chr15 103397979 103398139 -96835 - MER53 DNA hAT -1 192 11 9 1373 217 276 55 6 chr15 103398610 103398722 -96252 + MIR SINE MIR 69 191 -77 9 1373 321 26 0 0 chr15 103399022 103399060 -95914 + (TA)n Simple_repeat Simple_repeat 2 39 0 9 1373 315 265 15 0 chr15 103399068 103399136 -95838 - ID4_ SINE ID -11 72 4 9 1373 225 299 95 83 chr15 103399228 103399469 -95505 - MLT1A0 LTR MaLR -9 356 113 9 1373 326 343 60 50 chr15 103399520 103399818 -95156 + L1ME3 LINE L1 5394 5694 -468 9 1373 207 0 0 0 chr15 103399893 103399916 -95058 + (CAAAA)n Simple_repeat Simple_repeat 4 26 0 9 1373 229 222 48 24 chr15 103400019 103400102 -94872 + L1ME3 LINE L1 5903 5987 -175 9 1373 481 112 0 0 chr15 103400129 103400209 -94765 + L1_Mus4 LINE L1 6553 6632 -4 9 1373 4681 118 50 115 chr15 103400217 103400907 -94067 + L1_Mus3 LINE L1 4427 5162 -721 9 1373 3881 48 8 0 chr15 103400907 103401381 -93593 + L1Md_F2 LINE L1 6105 6582 0 9 1373 4681 118 50 115 chr15 103401381 103401621 -93353 + L1_Mus3 LINE L1 5163 5297 -586 9 1373 9483 58 22 2 chr15 103401622 103402835 -92139 + L1Md_F2 LINE L1 4349 5586 -297 9 1373 7870 62 1 3 chr15 103402835 103403820 -91154 + L1Md_F2 LINE L1 5587 6569 -13 9 1373 7240 99 4 42 chr15 103403820 103405060 -89914 + L1_Mus3 LINE L1 5307 6531 -107 9 1373 934 81 0 8 chr15 103405058 103405183 -89791 + L1_Mus1 LINE L1 6090 6213 -354 9 1373 469 83 0 0 chr15 103405181 103405253 -89721 + L1_Mus3 LINE L1 6562 6633 -5 9 1373 4658 163 7 40 chr15 103405252 103405713 -89261 - L1_Mur3 LINE L1 -3731 2149 1703 9 1373 423 0 0 0 chr15 103405713 103405760 -89214 + (TC)n Simple_repeat Simple_repeat 1 47 0 9 1373 4658 192 60 69 chr15 103405760 103406876 -88098 - L1_Mur3 LINE L1 -4178 1702 594 9 1373 387 0 0 0 chr15 103406876 103406919 -88055 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 1373 558 0 0 0 chr15 103406919 103406980 -87994 + (GA)n Simple_repeat Simple_repeat 2 63 0 9 1373 624 338 117 11 chr15 103407275 103407935 -87039 - L2a LINE L2 -20 3406 2674 9 1373 1670 153 137 14 chr15 103408843 103409160 -85814 - ORR1B1 LTR MaLR -8 386 27 9 1373 261 0 0 0 chr15 103409160 103409189 -85785 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 9 1373 1670 153 137 14 chr15 103409189 103409215 -85759 - ORR1B1 LTR MaLR -368 26 1 9 1373 1024 235 49 67 chr15 103409964 103410016 -84958 - MT2B LTR ERVL -6 595 545 9 1373 797 30 10 0 chr15 103410016 103410116 -84858 + (TC)n Simple_repeat Simple_repeat 2 102 0 9 1373 297 0 0 0 chr15 103410116 103410148 -84826 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1373 1024 212 91 102 chr15 103410148 103410566 -84408 - MT2B LTR ERVL -57 544 1 9 1373 1782 152 18 0 chr15 103410594 103410929 -84045 - RLTR15 LTR ERVK -18 341 1 9 1373 767 242 283 40 chr15 103411517 103411888 -83086 - RMER15 LTR ERVL -86 489 29 9 1373 3080 119 13 13 chr15 103413076 103413537 -81437 + RMER6B LTR ERVK 1 461 0 9 1373 3461 30 2 0 chr15 103413547 103413942 -81032 - MTA_Mm LTR MaLR 0 396 1 9 1373 387 0 0 0 chr15 103413993 103414036 -80938 + (TC)n Simple_repeat Simple_repeat 2 44 0 9 1373 387 0 0 0 chr15 103414036 103414078 -80896 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 1373 257 308 0 0 chr15 103414152 103414217 -80757 + PB1D10 SINE Alu 26 90 -27 9 1373 1898 154 42 81 chr15 103414493 103414875 -80099 - ORR1B2 LTR MaLR 0 367 1 9 1373 944 256 120 18 chr15 103414900 103415226 -79748 + ORR1E LTR MaLR 1 359 0 9 171 6386 118 182 3 chr15 103415514 103416742 -78232 - ORR1B2-int LTR MaLR -122 1841 395 9 1374 22 88 0 0 chr15 103418860 103418917 -76057 + AT_rich Low_complexity Low_complexity 1 57 0 9 1374 312 70 0 0 chr15 103419794 103419837 -75137 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 1374 351 0 0 0 chr15 103421070 103421109 -73865 + (CAAAA)n Simple_repeat Simple_repeat 4 42 0 9 1374 680 260 101 75 chr15 103421252 103421764 -73210 + RMER4B LTR ERVK 17 576 -9 9 1374 1482 238 53 29 chr15 103421811 103422187 -72787 + MurERV4-int LTR ERVK 62 446 -4814 9 1374 2390 129 10 8 chr15 103422298 103422719 -72255 + Lx2B LINE L1 5021 5457 -426 9 1374 14199 81 24 10 chr15 103422722 103425609 -69365 + L1VL2 LINE L1 66 2988 -627 9 1374 2162 91 3 53 chr15 103425793 103426130 -68844 - RLTRETN_Mm LTR ERVK -2 320 1 9 1374 3770 114 10 22 chr15 103426130 103426720 -68254 - MMETn-int LTR ERVK 0 4844 4262 9 1374 8746 119 55 9 chr15 103426721 103428213 -66761 + Lx2B LINE L1 5452 6999 -1 9 1374 786 49 0 0 chr15 103428280 103428382 -66592 + B1_Mus2 SINE Alu 46 147 0 9 1374 465 299 51 0 chr15 103428449 103428586 -66388 + MurERV4-int LTR ERVK 1573 1716 -3544 9 1374 198 0 0 0 chr15 103428606 103428628 -66346 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 9 1374 2264 250 47 25 chr15 103428719 103429310 -65664 + MYSERV-int LTR ERVK 4523 5126 -1424 9 1374 556 214 35 90 chr15 103429310 103429510 -65464 + RMER4A LTR ERVK 250 438 -28 9 1374 4046 165 48 82 chr15 103429574 103430544 -64430 + MYSERV6-int LTR ERVK 7856 8792 -167 9 1374 377 203 31 31 chr15 103430512 103430639 -64335 + MYSERV-int LTR ERVK 6417 6543 -7 9 1374 720 188 158 9 chr15 103430645 103430860 -64114 + RMER4B LTR ERVK 1 247 -338 9 1374 2005 251 57 96 chr15 103431842 103432491 -62483 + RMER1B Other Other 1 593 -473 9 1374 875 193 18 0 chr15 103432495 103432661 -62313 - B3 SINE B2 -46 170 2 9 1374 541 303 70 0 chr15 103433250 103433392 -61582 + B3A SINE B2 1 152 -46 9 1374 459 0 0 0 chr15 103433393 103433444 -61530 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 1374 271 197 45 0 chr15 103433492 103433558 -61416 - L1ME2z LINE L1 -251 6193 6125 9 1374 568 258 51 10 chr15 103433693 103433853 -61121 - B3A SINE B2 -14 181 18 9 1374 1856 234 97 28 chr15 103434045 103434613 -60361 - RLTR17 LTR ERVK -85 607 1 9 1374 407 292 0 84 chr15 103434614 103434745 -60229 - RSINE1 SINE B4 -44 121 2 9 1374 228 100 0 0 chr15 103435303 103435343 -59631 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 9 1374 723 276 79 19 chr15 103435738 103436004 -58970 - MER2 DNA MER2_type -47 298 17 9 1374 794 252 9 54 chr15 103436034 103436256 -58718 - B3 SINE B2 -3 213 2 9 1374 4152 144 115 17 chr15 103436256 103437121 -57853 + L1Md_F2 LINE L1 229 1161 -5477 9 1374 2405 149 38 38 chr15 103437123 103437598 -57376 + IAPLTR2_Mm LTR ERVK 1 475 0 9 1374 4519 57 66 22 chr15 103437600 103438239 -56735 + IAPEz-int LTR ERVK 3 662 -5819 9 1374 454 66 0 32 chr15 103438239 103438302 -56672 + IAPEz-int LTR ERVK 1359 1419 -5062 9 1374 1853 115 4 4 chr15 103438291 103438553 -56421 + IAPEz-int LTR ERVK 2236 2497 -5183 9 1374 953 80 24 0 chr15 103438548 103438673 -56301 + IAPEz-int LTR ERVK 4783 4910 -2770 9 1374 21462 14 2 0 chr15 103438675 103441030 -53944 + IAPEz-int LTR ERVK 4123 6481 0 9 1374 2547 151 38 38 chr15 103441030 103441505 -53469 + IAPLTR2_Mm LTR ERVK 1 475 0 9 1374 33912 64 6 8 chr15 103441506 103446001 -48973 + L1Md_F2 LINE L1 1116 5586 -297 9 1374 7868 79 5 2 chr15 103446001 103446992 -47982 + L1Md_F2 LINE L1 5587 6580 -2 9 1374 1342 245 17 34 chr15 103446992 103447042 -47932 + L1M3 LINE L1 5616 5657 -511 9 1374 1354 228 51 43 chr15 103447468 103447849 -47125 - Lx6 LINE L1 0 7696 7051 9 1374 3708 214 67 10 chr15 103450575 103451350 -43624 - RMER1C Other Other -2 1340 522 9 1374 23402 148 25 16 chr15 103451582 103455828 -39146 - Lx LINE L1 -5 6649 2384 9 1374 207 0 0 0 chr15 103455828 103455851 -39123 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 1374 23402 155 30 16 chr15 103455851 103456603 -38371 - Lx LINE L1 -3500 2383 1608 9 1374 396 55 0 0 chr15 103456604 103456659 -38315 + (TG)n Simple_repeat Simple_repeat 2 56 0 9 1374 772 66 9 0 chr15 103456663 103456769 -38205 - B1_Mus2 SINE Alu 0 147 41 9 1374 326 250 137 23 chr15 103456705 103456836 -38138 - RLTR25B LTR ERVK -519 509 364 9 1374 335 125 0 0 chr15 103456836 103456884 -38090 - MusHAL1 LINE L1 -2364 348 301 9 1374 477 0 0 0 chr15 103457929 103457982 -36992 + (CA)n Simple_repeat Simple_repeat 2 54 0 9 1374 1049 133 196 5 chr15 103458544 103458773 -36201 + Lx3C LINE L1 6694 6974 -2 1 1374 1709 273 30 14 chr15 103459525 103459956 -35018 + Lx7 LINE L1 6453 6890 -806 1 1374 21 0 0 0 chr15 103461816 103461837 -33137 + AT_rich Low_complexity Low_complexity 1 21 0 1 1374 8654 27 2 0 chr15 103462095 103463139 -31835 - L1Md_T LINE L1 0 6582 5587 1 1374 926 46 0 0 chr15 103463148 103463256 -31718 + L1Md_T LINE L1 5479 5586 -297 1 1374 8420 55 5 1 chr15 103463257 103464247 -30727 + L1Md_F2 LINE L1 5588 6581 -1 1 1374 681 291 120 9 chr15 103464579 103464804 -30170 + B4A SINE B4 2 251 -41 1 1374 274 281 0 0 chr15 103464807 103464871 -30103 + ID4 SINE ID 1 64 -19 1 1374 236 308 81 40 chr15 103464990 103465237 -29737 + L1M5 LINE L1 2269 2525 -3690 1 1374 4115 186 114 30 chr15 103465578 103466016 -28958 - Lx9 LINE L1 -364 7280 6809 1 1374 2329 199 7 16 chr15 103466016 103466441 -28533 + MTC LTR MaLR 1 421 0 1 1374 4115 186 114 30 chr15 103466441 103466904 -28070 - Lx9 LINE L1 -836 6808 6304 1 1374 711 0 0 0 chr15 103467344 103467423 -27551 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 1 1374 36118 69 5 3 chr15 103467425 103474090 -20884 - L1Md_F3 LINE L1 -10 6574 99 1 1374 267 167 0 0 chr15 103474091 103474133 -20841 + Lx7 LINE L1 7560 7601 -95 1 1374 7825 63 10 4 chr15 103474134 103475591 -19383 - L1Md_F2 LINE L1 0 6582 5115 1 1374 8657 83 5 8 chr15 103475569 103478065 -16909 - L1Md_F2 LINE L1 -3495 2388 99 1 1374 267 167 0 0 chr15 103478066 103478108 -16866 + Lx7 LINE L1 7560 7601 -95 1 1374 7831 62 10 5 chr15 103478109 103479566 -15408 - L1Md_F2 LINE L1 -1 6581 5115 1 1374 8027 113 53 4 chr15 103479544 103481454 -13520 - L1Md_F2 LINE L1 -3495 2388 421 1 1374 27 49 0 0 chr15 103481568 103481609 -13365 + AT_rich Low_complexity Low_complexity 1 41 0 1 1374 292 136 45 11 chr15 103482048 103482137 -12837 + (TA)n Simple_repeat Simple_repeat 2 93 0 1 1374 3289 67 185 0 chr15 103482442 103482874 -12100 + RLTR1B LTR ERV1 1 512 0 1 1374 477 0 0 0 chr15 103483387 103483440 -11534 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 1374 793 227 34 160 chr15 103483657 103484013 -10961 - RLTRETN_Mm LTR ERVK 0 322 12 1 1374 23 0 0 0 chr15 103485091 103485114 -9860 + AT_rich Low_complexity Low_complexity 1 23 0 1 1374 3500 97 2 4 chr15 103485398 103485886 -9088 - RLTR1C LTR ERV1 -16 487 1 1 1374 37273 61 1 24 chr15 103485913 103491796 -3178 + L1Md_T LINE L1 99 5586 -297 1 1374 8517 58 0 0 chr15 103491796 103492813 -2161 + L1Md_T LINE L1 5587 6582 0 1 1374 2031 226 26 24 chr15 103493173 103493639 -1335 - RMER19C LTR ERVK 0 611 145 1 1374 180 0 0 0 chr15 103493749 103493769 -1205 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 1 1374 343 177 0 31 chr15 103493770 103493834 -1140 - B1_Mur1 SINE Alu -7 142 81 1 1374 366 287 46 60 chr15 103494190 103494472 -502 + L1MC4 LINE L1 1400 1677 -4538 1 1374 1729 175 33 21 chr15 103494621 103494953 -21 - RMER17D2 LTR ERVK -2 807 472 1